isoform	chrom	strand	length	exons	structural_category	associated_gene	associated_transcript	ref_length	ref_exons	diff_to_TSS	diff_to_TTS	diff_to_gene_TSS	diff_to_gene_TTS	subcategory	RTS_stage	all_canonical	min_sample_cov	min_cov	min_cov_pos	sd_cov	FL	n_indels	n_indels_junc	bite	iso_exp	gene_exp	ratio_exp	FSM_class	coding	ORF_length	CDS_length	CDS_start	CDS_end	CDS_genomic_start	CDS_genomic_end	predicted_NMD	perc_A_downstream_TTS	seq_A_downstream_TTS	dist_to_cage_peak	within_cage_peak	pos_cage_peak	dist_to_polya_site	within_polya_site	polyA_motif	polyA_dist	ORF_seq	TSS_genomic_coord	TTS_genomic_coord	experiment_id	entry_id	LRGASP_id
transcript_10.known	ERCC-00025	+	1978	1	FSM	ERCC-00025A	DQ883689	1978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00025_+_0_2000
transcript_100002.nnic	chr3	-	1241	11	NNC	ENSG00000163933.10	novel	886	9	NA	NA	-14	378	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	102.970918224516	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTACAAGTTCACTAGCAT	-53127980	True	NA	NA	False	TATAAA	-19	NA	53130467	53103194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53103267_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_100011.nnic	chr3	-	383	2	NNC	ENSG00000163933.10	novel	5081	13	NA	NA	-19	-25713	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGGCTCTTAGTATGCA	-53127985	True	NA	-2	True	AATAAA	-15	NA	53130472	53129754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53130003_53130337
transcript_100012.nnic	chr3	+	1228	2	NNC	ENSG00000286531.1	novel	226	2	NA	NA	469	2146	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCCAGGCATGGTGGC	53197237	True	NA	NA	False	AATACA	-12	NA	53197288	53199505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_53197353_53198341
transcript_100013.known	chr3	-	2831	15	FSM	ENSG00000163931.17	ENST00000423525.6	2831	15	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1240.54997061458	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTCAGGCAATTGCCCCC	-53153063	True	NA	-21	True	AATAAA	-13	NA	53256000	53224713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225610_53225750_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_100016.known	chr3	-	2075	15	FSM	ENSG00000163931.17	ENST00000423516.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	1666.39069364827	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53237796_53237821_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_100022.known	chr3	-	1941	14	FSM	ENSG00000163931.17	ENST00000450814.6	1941	14	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	1314.32275628641	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAATTGGCCCTGAA	-53153085	True	NA	-25	True	AATATA	-10	NA	53256022	53225656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235065_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_100025.known	chr3	-	2996	14	FSM	ENSG00000163931.17	ENST00000462138.6	2996	14	0	0	0	0	multi-exon	FALSE	canonical	3	4089	junction_11	426.43206691372	2555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCAATTGCCCCCCA	-53153085	True	NA	-19	True	AATAAA	-15	NA	53256022	53224711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235175_53240250_53240349_53241131_53241246_53242124_53242243_53255835
transcript_100045.known	chr3	-	1931	15	NNC	ENSG00000163931.17	novel	2075	15	NA	NA	9	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	1691.3728091677	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAAATGAATTGGCCCTG	-53153076	True	NA	-27	True	AATATA	-8	NA	53256013	53225658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53225932_53226755_53226879_53228055_53228150_53228275_53228360_53229006_53229138_53229279_53229437_53230456_53230622_53231356_53231551_53233155_53233275_53234982_53235117_53235148_53235175_53240250_53240290_53241149_53241246_53242124_53242243_53255835
transcript_100047.known	chr3	-	5926	10	FSM	ENSG00000272886.6	ENST00000610213.6	5926	10	0	0	0	0	multi-exon	TRUE	canonical	3	187	junction_2	16.7729941672122	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAATTTAATTGTGTTTT	-53344772	True	NA	NA	False	AATAAA	-27	NA	53347543	53283428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_100049.known	chr3	-	1853	9	FSM	ENSG00000272886.6	ENST00000294241.10	1853	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	67.353428828828	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53344754	True	NA	NA	False	NA	NA	NA	53347525	53287369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53287661_53288064_53288284_53290790_53290857_53292068_53292828_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_100052.nic	chr3	-	2053	7	ISM	ENSG00000272886.6	ENST00000610213.6	5926	10	-9	8005	-9	1199	5prime_fragment	FALSE	canonical	3	198	junction_1	12.3378370155478	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAGAATGAATAAGACCT	-53344781	True	NA	NA	False	NA	NA	NA	53347552	53291433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_53292828_53304176_53304291_53312240_53312380_53319406_53319474_53342143_53342272_53344901_53344943_53347382
transcript_100061.known	chr3	+	2016	11	FSM	ENSG00000056736.10	ENST00000288167.8	2016	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.40462764674866	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTACTGGACCAAATGAT	53845918	True	NA	NA	False	AATAAA	-14	NA	53846567	53865794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_100067.known	chr3	+	2822	10	FSM	ENSG00000056736.10	ENST00000475124.1	2822	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	5.38401841759365	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAAACATCTAGTCTTCC	53845934	False	NA	-2	True	AATAAA	-9	NA	53846583	53865588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53855293_53855342_53856843_53856987_53857615_53858819_53860129_53860229_53864745
transcript_100068.known	chr3	+	1048	10	FSM	ENSG00000056736.10	ENST00000494338.1	1048	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	9.41760893351871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTGAAAAGTGGCAGAAAAA	53845935	False	NA	NA	False	NA	NA	NA	53846584	53864891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53846649_53848663_53848689_53849654_53849796_53851998_53852127_53852870_53852998_53856843_53856987_53857615_53857691_53858718_53858819_53860129_53860229_53864745
transcript_100078.known	chr3	-	3579	13	FSM	ENSG00000113812.14	ENST00000335754.8	3579	13	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_8	12.4730264526653	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTGCCTCAGCCATTAC	-53877224	True	NA	NA	False	ATTAAA	-1	NA	53882152	53867065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53868863_53869981_53870146_53871231_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_100089.nic	chr3	-	1738	11	ISM	ENSG00000113812.14	ENST00000335754.8	3579	13	-46	4092	-46	0	5prime_fragment	FALSE	canonical	3	107	junction_6	10.3658091821141	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTTGTGCAGTATAACA	-53877270	True	NA	NA	False	AATAAA	-17	NA	53882198	53871157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_53871497_53872383_53872525_53873031_53873128_53874210_53874365_53875947_53876081_53876619_53876714_53877213_53877388_53877646_53877752_53878356_53878468_53879938_53880110_53881978
transcript_100098.known	chr3	-	814	6	NNC	ENSG00000113811.12	novel	1497	5	NA	NA	-77	101	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	530.64617213356	6718	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTTAGTGTCACCTTTTC	NA	False	NA	-28	True	AATAAA	-17	NA	53891962	53885199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_53885562_53885825_53885831_53885833_53885913_53886850_53886935_53888392_53888484_53891769
transcript_100099.known	chr3	-	611	5	FSM	ENSG00000113811.12	ENST00000488746.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	562.606601009977	1382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGTAAATATTTT	-53887043	True	NA	-30	True	ATTAAA	-13	NA	53891865	53885300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53885562_53885825_53885905_53886850_53886935_53888392_53888484_53891769
transcript_100104.nnic	chr3	+	951	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-352687	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.60442225659	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54634901	True	NA	11	True	AATAAA	-14	NA	54634990	54879187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54635115_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_100107.nnic	chr3	+	1288	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-350311	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.7683499399089	77	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54637346	False	NA	11	True	AATAAA	-14	NA	54637366	54879187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54637828_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_100108.nnic	chr3	+	1076	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-349834	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.458771765402	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54637714	False	NA	11	True	AATAAA	-14	NA	54637843	54879187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54638093_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_100113.nnic	chr3	+	903	10	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345861	-6399	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.6951590185303	112	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54641133	True	NA	11	True	AATAAA	-14	NA	54641816	54879187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54816852_54816871_54837158_54837231_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_100130.nnic	chr3	+	813	8	NNC	ENSG00000157445.15	novel	3661	39	NA	NA	-345861	-6399	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	25.6109032903359	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCATTTTTCTCTTGTCTT	54641133	True	NA	11	True	AATAAA	-14	NA	54641816	54879187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_54641893_54642127_54642242_54752598_54752678_54764217_54764352_54838567_54838649_54846392_54846468_54871538_54871623_54879017
transcript_100139.known	chr3	+	432	1	FSM	ENSG00000229806.1	ENST00000449885.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGGCTCAGCTAATAAAG	54626204	False	NA	NA	False	NA	NA	NA	54626214	54626646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_54626200_54626600
transcript_100224.known	chr3	-	3140	4	FSM	ENSG00000265992.1	ENST00000583516.1	3140	4	0	0	0	0	multi-exon	FALSE	canonical	3	1215	junction_1	2827.76900675348	1641	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCTCTTCATATTTGT	-54576379	True	NA	-22	True	ATTAAA	-24	NA	54639857	54632121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_54632808_54633558_54633741_54634460_54634566_54637690
transcript_100228.nic	chr3	-	1307	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	-56466729	True	NA	-13	True	AATAAA	-13	NA	56468496	56433788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_56434050_56434350_56435148_56468247
transcript_100229.nic	chr3	-	1132	3	NIC	ENSG00000187672.14	novel	658	2	NA	NA	-29	-175	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTAGTGGGCCACATTTG	-56466729	True	NA	NA	False	AATAAA	-15	NA	56468496	56433963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_56434050_56434350_56435148_56468247
transcript_100230.known	chr3	-	658	2	FSM	ENSG00000187672.14	ENST00000477381.1	658	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTGCCTTCATCCATT	NA	False	NA	-13	True	AATAAA	-13	NA	56434747	56433788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56434050_56434350
transcript_100236.known	chr3	+	3042	18	FSM	ENSG00000180376.17	ENST00000341455.10	3042	18	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	34.3838499145761	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCTTAGTAGTAAAAAAAAAA	56552428	True	NA	8	True	AATAAA	-22	NA	56557218	56621808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566741_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111_56617606_56618171_56618213_56619270_56619528_56619776_56619902_56621531
transcript_100241.nic	chr3	+	1552	11	ISM	ENSG00000180376.17	ENST00000394672.8	3134	18	-15	8184	-1	-1500	5prime_fragment	FALSE	canonical	3	113	junction_5	21.844907873461	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAAGAACAAGAAGAGG	56552369	True	NA	NA	False	AAGAAA	-24	NA	56557159	56613653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56592969_56593102_56593490_56593742_56593943_56594029_56613588
transcript_100255.nnic	chr3	+	1738	8	NNC	ENSG00000180376.17	novel	2188	7	NA	NA	-1	240	intron_retention	FALSE	canonical	0	0	junction_7	63.40990716387	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTTCTGATTAAATTT	56552369	True	NA	5	True	AATAAA	-17	NA	56557159	56570986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312_56569871_56570703
transcript_100259.nnic	chr3	+	1884	8	NNC	ENSG00000180376.17	novel	2188	7	NA	NA	-1	240	intron_retention	FALSE	non_canonical	0	0	junction_7	69.7371156997653	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGTTCTGATTAAATTT	56552369	True	NA	5	True	AATAAA	-17	NA	56557159	56570986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569743_56570671_56570926
transcript_100263.known	chr3	+	2188	7	FSM	ENSG00000180376.17	ENST00000442522.6	2188	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	47.7144282860716	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGCGGAGATTGCAGT	56552437	True	NA	NA	False	NA	NA	NA	56557227	56570671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56569312
transcript_100264.known	chr3	+	1983	13	FSM	ENSG00000180376.17	ENST00000422222.5	1983	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	43.4824357898936	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCAGTGTAATCAGTTCA	56552370	True	NA	NA	False	GATAAA	-36	NA	56557160	56617301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56557254_56558845_56558911_56559568_56559595_56563683_56564126_56566593_56566760_56566949_56567054_56571180_56571303_56593490_56593742_56593943_56594029_56613588_56613751_56615127_56615273_56615921_56616054_56617111
transcript_100272.nic	chr3	+	718	4	ISM	ENSG00000180376.17	ENST00000439445.5	709	6	-3	2745	-1	172	5prime_fragment	FALSE	canonical	3	13	junction_3	73.9654574033642	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTAGTCTTGGACTTTT	56552369	True	NA	NA	False	AATAAA	-42	NA	56557159	56561394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_56557254_56558845_56558911_56559568_56559595_56560861
transcript_100276.known	chr3	+	744	4	FSM	ENSG00000180376.17	ENST00000460838.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	66.0319787846936	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGCAAAAAATTGCCAT	56552372	True	NA	NA	False	AATAAA	-37	NA	56557162	56566739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56557254_56558845_56558911_56563683_56564126_56566593
transcript_100277.known	chr3	+	443	3	FSM	ENSG00000180376.17	ENST00000487739.1	443	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	75	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTGTAATGGTTGATT	56554064	False	NA	NA	False	AATACA	-30	NA	56558854	56561222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_56558911_56559568_56559595_56560861
transcript_100279.known	chr3	-	2024	9	FSM	ENSG00000163947.12	ENST00000495373.5	2024	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	6.59426834455499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGGAATAGGAAGGGAT	-56801808	True	NA	0	True	GATAAA	-43	NA	56801949	56731592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56801702
transcript_100282.nic	chr3	-	741	3	ISM	ENSG00000163947.12	ENST00000338458.8	3639	13	-10	230913	-10	-184564	5prime_fragment	FALSE	canonical	2	12	junction_2	9	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTCAAGTGG	-57078889	True	NA	NA	False	ATTAAA	-9	NA	57079318	56958330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_56958890_57035087_57035177_57079225
transcript_100286.nic	chr3	-	609	2	ISM	ENSG00000163947.12	ENST00000477833.5	757	7	11	279680	-10	-260894	5prime_fragment	FALSE	canonical	2	12	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAATTTGGAGTTAGCA	-57078889	True	NA	NA	False	NA	NA	NA	57079318	57034660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_57035177_57079225
transcript_100287.known	chr3	-	3639	13	FSM	ENSG00000163947.12	ENST00000338458.8	3639	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	4.96865172858795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTGTACAGTGTTTG	-57078879	True	NA	-4	True	AATAAA	-19	NA	57079308	56727417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_56729623_56732237_56732425_56737184_56737356_56745204_56745463_56751055_56751133_56751299_56751397_56753503_56753567_56754980_56755152_56773708_56773817_56882291_56882355_56958822_56958890_57035087_57035177_57079225
transcript_100288.known	chr3	+	2190	2	FSM	ENSG00000186451.2	ENST00000334325.2	2190	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGGCTAAGACATGTGT	57060624	True	NA	NA	False	AATAAA	-15	NA	57060663	57075432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57060787_57073365
transcript_100308.nnic	chr3	-	704	3	NIC	ENSG00000163666.10	novel	1308	7	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	61	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCATGACTAAGTGAT	-57199444	True	NA	NA	False	AATAAA	-19	NA	57199983	57197915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_57198296_57198390_57198493_57199761
transcript_100309.known	chr3	-	757	3	FSM	ENSG00000163666.10	ENST00000473921.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	50	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGACTCATGACTAAGTGAT	-57199399	True	NA	NA	False	AATAAA	-19	NA	57199938	57197915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57198296_57198752_57198953_57199761
transcript_100310.known	chr3	+	6069	22	FSM	ENSG00000157500.12	ENST00000288266.8	6069	22	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_8	24.1588657360149	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATACTCTGAACTTT	57222697	True	NA	31	True	AATAAA	-35	NA	57227728	57273471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855_57242915_57246075_57246223_57247394_57247478_57248192_57248352_57249359_57249549_57252268_57252312_57253681_57253739_57256956_57257052_57257245_57257429_57259027_57259081_57259844_57260020_57260116_57260154_57260627_57260775_57267741_57267793_57268397_57268488_57269540
transcript_100313.known	chr3	+	516	8	FSM	ENSG00000157500.12	ENST00000444459.1	516	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	115.805783930841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	57222842	True	NA	7	True	AATAGA	-15	NA	57227873	57242892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57227938_57230713_57230768_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_100314.nic	chr3	+	571	7	ISM	ENSG00000157500.12	ENST00000482800.5	2217	20	-24	25129	-24	0	5prime_fragment	FALSE	canonical	3	236	junction_2	13.8283123417944	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAGAGAAAATGACA	57222733	True	NA	7	True	AATAGA	-15	NA	57227764	57242892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_57227938_57235565_57235665_57237491_57237552_57238044_57238117_57240464_57240553_57242100_57242143_57242855
transcript_100315.known	chr3	+	8780	3	FSM	ENSG00000174840.9	ENST00000311180.9	8780	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTGCCTTTTCAGGACC	57553237	True	NA	NA	False	AATAAA	-19	NA	57556273	57566848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57557688_57559309_57559389_57559561
transcript_100317.known	chr3	+	3040	2	FSM	ENSG00000174840.9	ENST00000487257.1	3040	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTCTCATCTTTCATTT	57553239	True	NA	9	True	AATAAA	-17	NA	57556275	57560937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57557688_57559309
transcript_100328.known	chr3	-	1467	5	FSM	ENSG00000168374.11	ENST00000496292.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	797.039326194135	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTCCTAATAAAATGATAA	-57579675	True	NA	NA	False	AATACA	-25	NA	57597325	57571391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57597073
transcript_100330.known	chr3	-	1360	4	FSM	ENSG00000168374.11	ENST00000489843.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	849.88639763729	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAATTATTCCTAATAAAA	-57579684	True	NA	NA	False	AATACA	-19	NA	57597334	57571397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57597073
transcript_100334.known	chr3	+	327	3	FSM	ENSG00000272146.6	ENST00000606192.5	327	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAATCTTTCTTATTT	57597616	True	NA	NA	False	AATAAA	-37	NA	57597714	57600920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57597753_57600058_57600170_57600742
transcript_100337.known	chr3	+	552	3	FSM	ENSG00000272146.6	ENST00000607782.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTCTTATTTTTAAAAA	57597697	True	NA	NA	False	AATAAA	-44	NA	57597795	57600927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57598052_57600058_57600170_57600742
transcript_100339.known	chr3	+	437	2	FSM	ENSG00000272146.6	ENST00000607297.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGAAGAGAATCTTTCTT	57597690	True	NA	NA	False	AATAAA	-33	NA	57597788	57600916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57598052_57600742
transcript_10034.known	chr1	+	1251	8	FSM	ENSG00000118292.9	ENST00000369102.5	1251	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	117.080994118061	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	150268189	False	NA	10	True	AATAAA	-16	NA	150268199	150280916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150268821_150272283_150272414_150272798_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_100340.known	chr3	+	588	1	FSM	ENSG00000272146.6	ENST00000658756.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGAGGAAGCGGAAAGCC	57597517	False	NA	3	True	ATTAAA	-14	NA	57597530	57598118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_57597500_57598100
transcript_100341.known	chr3	-	1596	6	FSM	ENSG00000168374.11	ENST00000303436.11	1596	6	0	0	0	0	multi-exon	TRUE	canonical	3	1709	junction_2	87.9477117382823	6155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGTTCTTTTTGAG	-57579694	True	NA	NA	False	AATAAA	-17	NA	57597344	57571362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584008_57584383_57584465_57597073
transcript_100342.known	chr3	-	1601	6	FSM	ENSG00000168374.11	ENST00000486310.5	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	727.466012951808	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATTTGGAATTATTCCT	-57579716	True	NA	NA	False	AATACA	-12	NA	57597366	57571404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_57572299_57575547_57575674_57577315_57577388_57583897_57584033_57584383_57584465_57597073
transcript_100343.nnic	chr3	+	1262	5	NNC	ENSG00000136068.16	novel	2527	11	NA	NA	-4	-17463	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	89.9982638721437	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGACTTCTGCTCCTG	58004017	True	NA	NA	False	AATAAA	-20	NA	58008393	58088390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_58008857_58077045_58077295_58078716_58078815_58081628_58081777_58088086
transcript_100344.nnic	chr3	+	772	2	NNC	ENSG00000136068.16	novel	2527	11	NA	NA	-3	-95157	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGAAGTATCCAAATACGA	58004018	True	NA	NA	False	AATAAA	-16	NA	58008394	58010696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_58008857_58010386
transcript_100345.nnic	chr3	-	629	3	NNC	ENSG00000283148.1	novel	845	3	NA	NA	304	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGAGTGCCTCCCTG	NA	False	NA	NA	False	AATAAA	-21	NA	58178070	58174477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58174976_58175986_58176037_58177989
transcript_100347.known	chr3	+	2198	10	FSM	ENSG00000163686.15	ENST00000478253.6	2198	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	21.1122806693575	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237438	True	NA	12	True	AATAAA	-23	NA	58237791	58294734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58237917_58249877_58249943_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_100348.known	chr3	+	2393	9	FSM	ENSG00000163686.15	ENST00000295962.8	2393	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	14.9242880902239	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGGTGGTTTCTATTT	58237400	True	NA	12	True	AATAAA	-23	NA	58237531	58294734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58237917_58256561_58256706_58267188_58267346_58269320_58269435_58270931_58271065_58274657_58274816_58285084_58285140_58285352_58285454_58293588
transcript_100365.known	chr3	+	805	6	FSM	ENSG00000163684.12	ENST00000466547.1	805	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	98.2710537238713	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTCAGAATTAACAGGGGA	58304751	False	NA	NA	False	NA	NA	NA	58306309	58317778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310289_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_100375.known	chr3	+	7985	6	FSM	ENSG00000163684.12	ENST00000445193.7	7985	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	80.7053901545615	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAGGAAACACTGAGTT	58304703	True	NA	NA	False	AATAAA	-26	NA	58306261	58324695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306652_58310308_58310407_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_100378.known	chr3	+	1378	5	FSM	ENSG00000255154.9	ENST00000481972.5	1378	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	86.4363927984041	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTGAAACCCCATCTCT	58304755	False	NA	NA	False	NA	NA	NA	58306313	58318472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310506_58310592_58316514_58316592_58316914_58316994_58317439
transcript_100381.known	chr3	+	648	4	FSM	ENSG00000255154.9	ENST00000475412.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	120.089781228694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTCTCAGAATTAACAGG	58304703	True	NA	NA	False	NA	NA	NA	58306261	58317775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58316514_58316592_58316914_58316994_58317439
transcript_100385.known	chr3	+	1531	6	FSM	ENSG00000255154.9	ENST00000477305.5	1531	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.499617020652	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCATCTCTACCAAAAAAAAA	58304713	True	NA	NA	False	NA	NA	NA	58306271	58318484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58306418_58310506_58310592_58315721_58315804_58316497_58316592_58316914_58316994_58317439
transcript_100386.known	chr3	+	3001	18	FSM	ENSG00000168297.16	ENST00000356151.7	3001	18	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_16	15.349898278576	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTCTCTTATTCTTTTG	58332355	True	NA	118	True	AATAGA	-32	NA	58332891	58426127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58424751
transcript_100387.known	chr3	+	1974	17	FSM	ENSG00000168297.16	ENST00000302779.9	1974	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_16	17.9564359979925	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCCTTAAGATCTTGCT	58332343	True	NA	NA	False	AATAAA	-14	NA	58332879	58425151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58333091_58365873_58365925_58369430_58369479_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58424751
transcript_100388.known	chr3	+	2825	17	FSM	ENSG00000168297.16	ENST00000463280.5	2825	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	32.6506125516812	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTGTCTGTAGCTTGAC	58332361	True	NA	14	True	ATTAAA	-16	NA	58332897	58426023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58333091_58382513_58382701_58390581_58390660_58391146_58391221_58391772_58391848_58394997_58395103_58395657_58395760_58397038_58397201_58397604_58397723_58399298_58399378_58403861_58403911_58408923_58409002_58409531_58409619_58410089_58410160_58412900_58412964_58420535_58420569_58424751
transcript_100396.known	chr3	-	1478	9	FSM	ENSG00000168291.13	ENST00000383714.8	1478	9	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_8	759.612719992892	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	-58428275	True	NA	-2	True	AATAAA	-17	NA	58433857	58427629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433767
transcript_100399.known	chr3	-	1507	10	FSM	ENSG00000168291.13	ENST00000302746.11	1507	10	0	0	0	0	multi-exon	FALSE	canonical	3	2088	junction_9	100.871143813883	9728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATTTTTTTTTTTTTGAG	-58428250	True	NA	-2	True	AATAAA	-17	NA	58433832	58427629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_1004.known	chr1	+	1748	3	FSM	ENSG00000224870.8	ENST00000448629.7	1759	3	1	10	1	0	multi-exon	FALSE	canonical	3	37	junction_1	39	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAATTACTCTGTCTCT	1397611	True	NA	17	True	TATAAA	-10	NA	1399519	1402036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399690_1400157_1400304_1400604
transcript_100400.known	chr3	-	1616	10	FSM	ENSG00000168291.13	ENST00000469364.5	1616	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	713.850816105383	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAATTTCTAACATG	-58428238	True	NA	18	True	ATTAAA	-42	NA	58433820	58427650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429942_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_100401.known	chr3	-	1535	9	FSM	ENSG00000168291.13	ENST00000461692.5	1535	9	0	0	0	0	multi-exon	FALSE	canonical	3	2161	junction_3	74.7544940120659	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATATAATATACATTTACT	-58428257	True	NA	-23	True	ATTAAA	-1	NA	58433839	58427691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630
transcript_100402.known	chr3	-	1397	11	FSM	ENSG00000168291.13	ENST00000485460.5	1397	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	694.260102555231	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTTTGTTTTGATAAGG	-58428236	True	NA	-3	True	ATTAAA	-21	NA	58433818	58427671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58428180_58428472_58428615_58429707_58429800_58430127_58430239_58430656_58430789_58430842_58430943_58431592_58431629_58431730_58431794_58431876_58431985_58433630_58433685_58433767
transcript_100403.known	chr3	+	1759	4	FSM	ENSG00000168301.13	ENST00000490264.1	1759	4	0	0	0	0	multi-exon	TRUE	canonical	3	3	junction_1	51.6999892542435	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACTAATAAAAAATGAA	58490617	True	NA	-15	True	NA	NA	NA	58492118	58502327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58492170_58494152_58494409_58498712_58498783_58500945
transcript_100405.known	chr3	+	1555	3	FSM	ENSG00000168301.13	ENST00000404589.8	1555	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	15.5	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTGTATTTATTGAT	58490594	True	NA	14	True	AATAAA	-17	NA	58492095	58502356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_58492170_58498712_58498783_58500945
transcript_100406.nic	chr3	+	1531	3	NIC	ENSG00000168301.13	novel	1555	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	44	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTATTTATTGATTATT	58490594	True	NA	18	True	AATAAA	-21	NA	58492095	58502360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_58492170_58498712_58498783_58500973
transcript_100407.known	chr3	-	1072	6	FSM	ENSG00000168306.13	ENST00000467738.1	1072	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.2687759489278	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTTTTAGAGTCAT	-58526667	False	NA	-5	True	ATTAAA	-14	NA	58526749	58505135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58505287_58508892_58509026_58517205_58517424_58522495_58522602_58524425_58524606_58526465
transcript_100408.known	chr3	-	2994	4	FSM	ENSG00000168309.18	ENST00000360997.7	2994	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTGTTGGTCAGTCTCTG	-58577339	False	NA	-2	True	AATAAA	-22	NA	58577391	58564116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58577308
transcript_100409.known	chr3	-	1432	4	FSM	ENSG00000168309.18	ENST00000447756.2	1432	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACAGCTTCTAACTCAAT	-58587061	True	NA	NA	False	CATAAA	-20	NA	58587113	58565851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58566696_58567207_58567365_58569690_58569866_58586857
transcript_10041.known	chr1	-	1730	7	FSM	ENSG00000117362.13	ENST00000369109.8	1730	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	77.0528318031783	637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGGGGAACTTGGCTTT	-150265677	True	NA	-21	True	AATAAA	-14	NA	150269016	150265403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150266195_150266532_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_100415.nnic	chr3	-	939	7	NNC	ENSG00000163689.21	novel	949	8	NA	NA	0	68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	21.458616502986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	-59049534	True	NA	NA	False	AAAAAG	-13	NA	59050084	58913501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610_59049639_59049908
transcript_100416.nic	chr3	-	1257	6	ISM	ENSG00000163689.21	ENST00000479931.5	949	8	-373	26156	-48	68	5prime_fragment	FALSE	canonical	3	39	junction_1	11.2178429299041	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGGTTGTTTTCTTT	NA	False	NA	NA	False	AAAAAG	-13	NA	59050132	58913501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_100420.nnic	chr3	-	1433	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6575	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_4	5.93717104351896	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842368	True	NA	-6	True	AATAAA	-21	NA	58842651	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842146
transcript_100421.nnic	chr3	-	1157	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6586	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	9.23309265630969	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842357	True	NA	-6	True	AATAAA	-21	NA	58842640	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842411
transcript_100422.nnic	chr3	-	1095	5	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6563	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	10.4970233876085	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842380	True	NA	-6	True	AATAAA	-21	NA	58842663	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58842496
transcript_100426.nnic	chr3	-	1222	4	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6582	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.9700509722291	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842361	True	NA	-6	True	AATAAA	-21	NA	58842644	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58842146
transcript_100427.nnic	chr3	-	956	4	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6583	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_3	12.0277457017791	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842360	True	NA	-6	True	AATAAA	-21	NA	58842643	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58842411
transcript_100428.nnic	chr3	-	857	4	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6597	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.9700509722291	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842346	True	NA	-6	True	AATAAA	-21	NA	58842629	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58806394_58806457_58842496
transcript_100429.nnic	chr3	-	1371	4	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6575	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	9.84321537348893	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842368	True	NA	-6	True	AATAAA	-21	NA	58842651	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58831685_58831890_58842146
transcript_100430.nnic	chr3	-	1095	4	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6586	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10.8730042868667	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842357	True	NA	-6	True	AATAAA	-21	NA	58842640	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58831685_58831890_58842411
transcript_100431.nnic	chr3	-	1033	4	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6563	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	11.5566238822398	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842380	True	NA	-6	True	AATAAA	-21	NA	58842663	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58831685_58831890_58842496
transcript_100434.nnic	chr3	-	1060	4	NNC	ENSG00000163689.21	novel	3291	17	NA	NA	6586	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.41629792788369	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTTAAACTGCTTCTT	-58842357	True	NA	-8	True	AATAAA	-19	NA	58842640	58742007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58806394_58806457_58831685_58831890_58842411
transcript_100441.nnic	chr3	-	1158	3	NNC	ENSG00000163689.21	novel	2650	16	NA	NA	6584	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAAACTGCTTCTTTT	-58842359	True	NA	-6	True	AATAAA	-21	NA	58842642	58742005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58742573_58753768_58753864_58842146
transcript_100445.nnic	chr3	-	873	3	NNC	ENSG00000163689.21	novel	2761	15	NA	NA	6575	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGATGCCACTGTTTT	-58842368	True	NA	NA	False	AATAAA	-33	NA	58842651	58753699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58753864_58831685_58831890_58842146
transcript_100448.nnic	chr3	-	708	3	NNC	ENSG00000163689.21	novel	428	4	NA	NA	6582	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGAATCCATCACTTT	-58842361	True	NA	NA	False	AATAAA	-17	NA	58842644	58753715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_58753864_58806394_58806457_58842146
transcript_100450.known	chr3	-	424	3	FSM	ENSG00000163689.21	ENST00000470454.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGAGATTCAGCATTCC	NA	False	NA	NA	False	NA	NA	NA	58753843	58717366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58717629_58734471_58734559_58753768
transcript_100451.known	chr3	-	2761	15	FSM	ENSG00000163689.21	ENST00000468415.6	2761	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	20.6219617428228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGATGCCACTGTTTT	-59049482	True	NA	NA	False	AATAAA	-33	NA	59050032	58753699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58753864_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870161_58870310_58884544_58884710_58913697_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_100452.known	chr3	-	3314	17	FSM	ENSG00000163689.21	ENST00000482387.7	3291	17	-25	2	-18	-2	multi-exon	FALSE	canonical	3	11	junction_4	15.515617132425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAGCTTTTAAACTGCTTC	-59049500	True	NA	-10	True	AATAAA	-17	NA	59050050	58742009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_58742573_58753768_58753864_58806394_58806457_58831685_58831890_58849031_58849410_58863557_58863893_58866565_58866689_58867816_58867937_58869327_58869491_58870172_58870310_58884544_58884710_58913707_58913865_58937647_58937763_59039556_59039630_59046228_59046323_59047164_59047255_59049610
transcript_100455.known	chr3	-	1033	10	FSM	ENSG00000189283.10	ENST00000476844.5	1033	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	13.0393516463828	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTCGGTGTATTG	-61250654	True	NA	2	True	ATTAAA	-19	NA	61251413	59749309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_59749569_59752220_59752322_59922345_59922415_60011370_60011401_60014006_60014153_60536859_60536980_60821918_60822012_61042046_61042100_61200616_61200666_61251300
transcript_100456.known	chr3	-	3116	10	FSM	ENSG00000189283.10	ENST00000492590.6	3116	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	12.3738074621804	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTTGAGTGTGTGGT	-61250693	True	NA	NA	False	ATTAAA	-21	NA	61251452	59747276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_59749580_59752220_59752322_59922345_59922415_60011370_60011401_60014006_60014153_60536859_60536980_60821918_60822012_61042046_61042100_61200616_61200666_61251300
transcript_100459.nnic	chr3	-	502	4	NNC	ENSG00000189283.10	novel	3116	10	NA	NA	-2	-352443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4631467093403	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGAAAATGCGGTGCT	-61250695	True	NA	NA	False	AATAAA	-19	NA	61251454	60888252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_60888499_61042046_61042100_61200616_61200666_61251300
transcript_100466.nnic	chr3	-	559	3	NNC	ENSG00000189283.10	novel	3116	10	NA	NA	210638	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTCTCGGTGTATTG	NA	False	NA	2	True	ATTAAA	-19	NA	59803512	59749309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_59749580_59752220_59752322_59803324
transcript_100469.known	chr3	+	3011	3	FSM	ENSG00000144724.20	ENST00000495879.1	3011	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	77	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTATGTAAGTCAAAAG	61547519	True	NA	NA	False	NA	NA	NA	61561568	61771395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_61562373_61748877_61748983_61769293
transcript_100472.known	chr3	-	652	1	FSM	ENSG00000226360.5	ENST00000472730.1	652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5679	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACATTTGAATAAATTCT	-61741834	False	NA	NA	False	NA	NA	NA	61743106	61742454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_61742500_61743100
transcript_10048.known	chr1	+	509	6	FSM	ENSG00000118292.9	ENST00000369099.8	509	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	103.150375665821	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTACCATCTACTCCT	150271186	True	NA	10	True	AATAAA	-16	NA	150272789	150280916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150279642_150279742_150280834
transcript_100487.known	chr3	-	2758	6	FSM	ENSG00000241472.7	ENST00000664758.1	2758	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.5614909311415	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACATTAAACATAATGAAAA	NA	False	NA	NA	False	NA	NA	NA	62318960	62261845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_100496.known	chr3	-	2661	5	FSM	ENSG00000241472.7	ENST00000474795.5	2661	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.0623918681884	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTGGTTGTCTTTTATA	-62318043	True	NA	NA	False	ATTAAA	-15	NA	62318947	62261822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_100497.known	chr3	-	2849	5	FSM	ENSG00000241472.7	ENST00000668824.1	2849	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.0883249639097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCCAGCTGTCCATTTA	-62318036	True	NA	NA	False	NA	NA	NA	62318940	62261630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_100499.known	chr3	-	560	5	FSM	ENSG00000241472.7	ENST00000479018.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.06917857360853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCCGCCCGCCTCAGCCT	-62318031	True	NA	NA	False	NA	NA	NA	62318935	62263928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62264143_62292613_62292718_62294699_62294779_62317807_62317901_62318865
transcript_100504.known	chr3	-	2187	5	FSM	ENSG00000241472.7	ENST00000670193.1	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	13.5899779249269	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAACCTTGTATTTTAA	-62318030	True	NA	NA	False	NA	NA	NA	62318934	62290858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62292718_62294699_62294779_62317105_62317193_62317807_62317901_62318865
transcript_100505.known	chr3	-	2521	5	FSM	ENSG00000241472.7	ENST00000669571.1	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	13.6930639376292	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATCTGATAAAGCAAGTT	-62318033	True	NA	NA	False	NA	NA	NA	62318937	62290530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_62292718_62294699_62294779_62317105_62317193_62317807_62317904_62318865
transcript_100509.nnic	chr3	-	513	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	15	-21536	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	20.4993224820291	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-62318004	True	NA	NA	False	AATAAA	-16	NA	62318908	62315808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318651
transcript_100510.nnic	chr3	-	328	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.8174071805952	108	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-62318033	True	NA	NA	False	AATAAA	-16	NA	62318937	62315808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317193_62317807_62317901_62318865
transcript_100511.nnic	chr3	-	354	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	14.9888847706114	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	62318960	62315808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317193_62317807_62317904_62318865
transcript_100513.nnic	chr3	-	366	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.7410927974683	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	-62318033	True	NA	NA	False	AATAAA	-16	NA	62318937	62315808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317231_62317807_62317901_62318865
transcript_100514.nnic	chr3	-	392	4	NNC	ENSG00000241472.7	novel	1841	6	NA	NA	0	-21536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.41629792788369	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTTCCATAATTATAGT	NA	False	NA	NA	False	AATAAA	-16	NA	62318960	62315808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_62315885_62317105_62317231_62317807_62317904_62318865
transcript_100517.known	chr3	+	3369	6	FSM	ENSG00000114405.11	ENST00000462069.6	3369	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	31.2499599999744	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	62318108	True	NA	NA	False	ATTAAA	-16	NA	62319021	62336213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_100520.known	chr3	+	3525	6	FSM	ENSG00000114405.11	ENST00000494481.5	3525	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	78.0579272079396	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCACTTCTGAGATAA	62318129	True	NA	NA	False	ATTAAA	-16	NA	62319042	62336213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319233_62319720_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_100522.known	chr3	+	582	5	FSM	ENSG00000114405.11	ENST00000486169.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	76.3098126062435	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTACACTTGGGGAGG	62318101	True	NA	NA	False	AATAAA	-40	NA	62319014	62324133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319056_62319720_62319833_62320459_62320525_62321929_62322054_62323893
transcript_100523.known	chr3	+	690	5	FSM	ENSG00000114405.11	ENST00000232519.9	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	82.0015243760749	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	62318108	True	NA	12	True	ATTAAA	-24	NA	62319021	62333646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319056_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_100527.known	chr3	+	768	5	FSM	ENSG00000114405.11	ENST00000542214.2	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	7.08872343937891	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCAGTGTTGTGAGT	62318807	False	NA	12	True	ATTAAA	-24	NA	62319720	62333646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_62319833_62320459_62320525_62321929_62322054_62331324_62331400_62333254
transcript_100553.nnic	chr3	+	2058	9	NIC	ENSG00000244342.5	novel	1957	9	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_6	15.9643156759067	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	62947957	True	NA	17	True	AATAAA	-17	NA	62950345	63125062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63118698_63118943_63122255_63122320_63123322_63123449_63124082
transcript_10056.known	chr1	-	2353	6	FSM	ENSG00000117362.13	ENST00000360244.8	2353	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	30.2720993655874	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTGGGGGAACTTGGCT	-150269282	False	NA	-23	True	AATAAA	-12	NA	150269303	150265405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150266657_150267074_150267203_150267355_150267479_150267715_150267790_150267956_150268128_150268697
transcript_100566.nnic	chr3	+	1061	8	NNC	ENSG00000244342.5	novel	758	7	NA	NA	-79	23738	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	27.8501822805745	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTTTGGACATTCATT	62947962	True	NA	8	True	AATAAA	-41	NA	62950350	63148800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63102691_63102834_63106302_63106423_63144744_63144988_63146623_63146730_63148679
transcript_10057.known	chr1	+	418	5	FSM	ENSG00000118292.9	ENST00000369098.3	418	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	62.7176211283559	1237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271176	True	NA	8	True	AATAAA	-14	NA	150272779	150280914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150272864_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_10059.nnic	chr1	+	423	5	NNC	ENSG00000118292.9	novel	1251	8	NA	NA	-116	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	102.671807230612	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150272653	False	NA	8	True	AATAAA	-14	NA	150272663	150280914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_150272753_150274086_150274171_150275740_150275800_150276521_150276633_150280834
transcript_100591.nnic	chr3	+	905	7	NNC	ENSG00000244342.5	novel	758	7	NA	NA	-65	23738	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_4	27.1830216618143	39	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTTTGGACATTCATT	62947976	True	NA	8	True	AATAAA	-41	NA	62950364	63148800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63144744_63144988_63146623_63146730_63148679
transcript_100598.nnic	chr3	+	865	7	NNC	ENSG00000244342.5	novel	758	7	NA	NA	0	23738	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	29.706434020633	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGTTTGGACATTCATT	62948041	True	NA	8	True	AATAAA	-41	NA	62950429	63148800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_62950519_62952006_62952084_62985035_62985145_63106302_63106423_63144744_63144988_63146623_63146730_63148679
transcript_1006.known	chr1	+	1843	3	FSM	ENSG00000224870.8	ENST00000447725.2	1843	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAGATAAACAAAAGTATAA	1397663	True	NA	-13	True	NA	NA	NA	1399571	1402006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399690_1399980_1400304_1400604
transcript_100603.nnic	chr3	+	1089	6	NNC	ENSG00000244342.5	novel	1957	9	NA	NA	-79	3570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	26.8298341403744	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTGGCAATTCTTCAG	62947962	True	NA	NA	False	AATAAA	-20	NA	62950350	63117465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63113576_63113767_63117015
transcript_100605.nnic	chr3	+	1518	6	NIC	ENSG00000244342.5	novel	758	7	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	26.1503346058898	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTCGATGTCTGCTT	62947999	True	NA	17	True	AATAAA	-17	NA	62950387	63125062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_62950519_62952006_62952084_62985035_62985120_63106302_63106423_63123322_63123449_63124082
transcript_100625.known	chr3	+	2527	6	FSM	ENSG00000163630.11	ENST00000478300.6	2527	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.93938769133981	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTGGACAGTGAACAAT	63278237	True	NA	NA	False	AATAAA	-17	NA	63278307	63616924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_63278552_63278676_63278743_63480831_63480957_63556542_63556742_63609124_63609317_63615223
transcript_100638.nnic	chr3	-	1037	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95620	515	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_1	6.84754619472471	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCACTTTTATTCCA	-63645160	True	NA	-1	True	AATAAA	-14	NA	63645671	63423080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63423766_63426685_63426807_63549977_63550052_63645514
transcript_100639.nnic	chr3	-	1010	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95620	515	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	9.46337971105226	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCACTTTTATTCCA	-63645160	True	NA	-1	True	AATAAA	-14	NA	63645671	63423080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63423766_63426712_63426807_63549977_63550052_63645514
transcript_100644.nnic	chr3	-	349	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95574	-43039	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.49691252107735	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	-63645114	True	NA	0	True	AATAAA	-19	NA	63645625	63466634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63549977_63550052_63588980_63589045_63645514
transcript_100646.nnic	chr3	-	366	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95574	-43039	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.78423336480244	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	-63645114	True	NA	0	True	AATAAA	-19	NA	63645625	63466634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63549977_63550069_63588980_63589045_63645514
transcript_100648.nnic	chr3	-	456	4	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95620	-43042	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	10.8012344973464	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCAGTCTAGTATTTTG	-63645160	True	NA	-3	True	AATAAA	-16	NA	63645671	63466637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63498818_63498947_63549977_63550052_63645514
transcript_100649.nnic	chr3	-	916	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95620	515	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCACTTTTATTCCA	-63645160	True	NA	-1	True	AATAAA	-14	NA	63645671	63423080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63423766_63549977_63550052_63645514
transcript_100652.nnic	chr3	-	331	3	NNC	ENSG00000241359.1	novel	558	5	NA	NA	-95620	-43039	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	8.5	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTAGTATTTTGTTA	-63645160	True	NA	0	True	AATAAA	-19	NA	63645671	63466634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_63466735_63549977_63550052_63645514
transcript_100659.known	chr3	+	2323	3	FSM	ENSG00000163635.20	ENST00000674254.1	2323	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGTCTTGAGCCATAG	63864592	False	NA	NA	False	AATAAA	-22	NA	63864639	63905879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_63864689_63898398_63898498_63903704
transcript_100667.known	chr3	-	892	8	FSM	ENSG00000163634.12	ENST00000295899.10	892	8	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_7	78.2632918879781	4283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTGTGCTCATTAATA	-63855961	True	NA	-2	True	AATAAA	-17	NA	63863805	63833869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63839655_63839774_63863771
transcript_100676.known	chr3	-	836	7	FSM	ENSG00000163634.12	ENST00000469584.5	836	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	203.694556191917	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTTTGTGCTCATTAAT	-63856024	True	NA	-3	True	AATAAA	-16	NA	63863868	63833870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_63834200_63835153_63835224_63835323_63835391_63836300_63836359_63837975_63838063_63838371_63838500_63863771
transcript_100681.known	chr3	-	255	1	FSM	ENSG00000280620.1	ENST00000626439.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGAGTTGTTAGTCCTTC	-63911760	False	NA	NA	False	AGTAAA	-18	NA	63911772	63911517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_63911500_63911800
transcript_100682.known	chr3	-	1495	9	FSM	ENSG00000163636.11	ENST00000492933.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_7	516.8353068193	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-64010305	True	NA	-20	True	AATAAA	-18	NA	64023472	64010554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64022642_64022802_64023274
transcript_100688.known	chr3	-	1176	8	FSM	ENSG00000163636.11	ENST00000482510.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	438.807753917315	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATAAAATAAATACTGCAT	-64010291	True	NA	-49	True	NA	NA	NA	64023458	64010583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023391
transcript_100691.known	chr3	-	1362	8	FSM	ENSG00000163636.11	ENST00000295901.9	1362	8	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_7	107.470546510879	5126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTATTTTTTTCTTAAAC	-64010327	True	NA	-16	True	AATAAA	-22	NA	64023494	64010550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317_64022524_64023274
transcript_100692.known	chr3	-	2052	7	FSM	ENSG00000163636.11	ENST00000476464.5	2052	7	0	0	0	0	multi-exon	FALSE	canonical	3	1169	junction_5	51.1750807414008	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCATTTATTTTTTTCTT	-64010270	True	NA	-20	True	AATAAA	-18	NA	64023437	64010554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_64010765_64010877_64010956_64013438_64013608_64018598_64018708_64018817_64019038_64019295_64019442_64022317
transcript_100696.nic	chr3	-	1691	5	ISM	ENSG00000151276.24	ENST00000460329.6	3694	22	-331	91717	-331	0	5prime_fragment	TRUE	canonical	0	0	junction_4	52.3133587145769	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	NA	False	NA	NA	False	AATGAA	-13	NA	65598217	65452581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_65453341_65470282_65470485_65478591_65478799_65493511_65493632_65597814
transcript_100697.known	chr3	-	2247	6	FSM	ENSG00000151276.24	ENST00000464060.5	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	38.5050646019455	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACAGAGCTAGTGTGT	-66034371	True	NA	NA	False	AATGAA	-13	NA	66038834	65452581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_65453341_65470282_65470488_65478591_65478799_65493511_65493632_65621971_65622089_66037995
transcript_10070.nnic	chr1	+	442	4	NIC	ENSG00000118292.9	novel	418	5	NA	NA	-108	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	106.177001066877	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGGTTACCATCTACTC	150271068	True	NA	8	True	AATAAA	-14	NA	150272671	150280914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150272864_150275740_150275800_150276521_150276633_150280834
transcript_100708.nic	chr3	+	1175	10	NIC	ENSG00000144741.19	novel	1023	9	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	117.474767450948	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66220931	False	NA	9	True	AATAAA	-18	NA	66220944	66378079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66304452_66304538_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_100718.known	chr3	+	1023	9	FSM	ENSG00000144741.19	ENST00000336733.10	1023	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	46.2817458616245	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66217999	True	NA	9	True	AATAAA	-18	NA	66221011	66378079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_100737.nnic	chr3	+	975	7	FSM	ENSG00000144741.19	ENST00000686445.1	1751	7	-47	823	41	0	multi-exon	FALSE	canonical	3	20	junction_4	109.272976226208	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGCCTTTTAGAGCT	66220931	False	NA	9	True	AATAAA	-18	NA	66220944	66378079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66221128_66243202_66243313_66262050_66262156_66263331_66263380_66369477_66369543_66370528_66370603_66377689
transcript_100749.known	chr3	+	2035	10	FSM	ENSG00000144741.19	ENST00000354883.11	2035	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	67.0571895225759	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTCCCTCTTTCACA	66217988	True	NA	97	True	AATAAA	-18	NA	66221000	66378923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66221128_66236543_66236701_66243202_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_100750.known	chr3	+	1096	9	FSM	ENSG00000144741.19	ENST00000413054.5	1096	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	128.794409816575	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATAAGTTTGGTAATG	66243187	False	NA	-14	True	NA	NA	NA	66243202	66378056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66243313_66262050_66262156_66263331_66263380_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66371201_66371414_66377689
transcript_100751.known	chr3	+	1840	9	FSM	ENSG00000144741.19	ENST00000483224.5	1840	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	123.942463970183	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCCCTCTTTCACATTGC	66243187	False	NA	101	True	AATAAA	-22	NA	66243202	66378927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66243313_66262050_66262156_66263331_66263380_66304452_66304538_66346363_66346409_66362859_66362930_66369477_66369543_66370528_66370603_66377689
transcript_100754.known	chr3	+	4680	4	FSM	ENSG00000163376.11	ENST00000417314.2	4680	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	11.1455023315337	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAGTGTTGCAAAGTGA	66997313	True	NA	8	True	AATAAA	-19	NA	66998306	67011210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_66998372_66998980_66999192_67003194_67004310_67007921
transcript_100759.known	chr3	-	2350	11	FSM	ENSG00000172340.15	ENST00000307227.10	2350	11	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_4	46.75991873389	1364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTGTATCTCTCAT	-67647623	True	NA	-1	True	AATAAA	-22	NA	67654612	67374718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_67375860_67400730_67400852_67495797_67495941_67498133_67498296_67508806_67508904_67518246_67518337_67520481_67520635_67528131_67528223_67529086_67529187_67609454_67609597_67654502
transcript_100770.nic	chr3	-	1039	2	ISM	ENSG00000172340.15	ENST00000492795.1	1512	10	-13	200070	-8	-200070	5prime_fragment	FALSE	canonical	3	693	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGAACAACAAACAACTTC	-67647631	True	NA	NA	False	NA	NA	NA	67654620	67608675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_67609597_67654502
transcript_100772.known	chr3	+	2715	6	FSM	ENSG00000241316.8	ENST00000659899.1	2715	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.57681974534503	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTTTAAGTGACAATATCC	67654011	True	NA	NA	False	TTTAAA	-7	NA	67654711	67752215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770_67746958_67749852_67749971_67750413
transcript_100779.known	chr3	+	2336	4	FSM	ENSG00000241316.8	ENST00000464420.6	2336	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGGAAATAAATAAATG	67653976	True	NA	NA	False	AGTAAA	-40	NA	67654676	67748463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67669815_67669910_67670881_67671005_67746770
transcript_100787.known	chr3	+	2063	2	FSM	ENSG00000241316.8	ENST00000671174.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATAAATAAATGTAAAT	67654037	True	NA	NA	False	AGTAAA	-45	NA	67654737	67748468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_67655103_67746770
transcript_100788.nnic	chr3	+	640	2	NNC	ENSG00000241316.8	novel	2063	2	NA	NA	-3	-1409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTCTTTCAGATTTAC	67653973	True	NA	NA	False	AATAAA	-30	NA	67654673	67747009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_67655075_67746770
transcript_100790.nnic	chr3	+	1518	2	Genic_Genomic	ENSG00000241506.1	novel	1320	1	NA	NA	-20	247	multi-exon	FALSE	canonical	2	14	junction_1	0	147	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTGAGGAAGTAGTGCA	68635627	True	NA	NA	False	NA	NA	NA	68635684	68637271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_68636230_68636298
transcript_100791.nnic	chr3	-	2225	6	NNC	ENSG00000163377.16	novel	2229	6	NA	NA	-14	2	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	10.4192130221049	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTTGTGATTATTAT	-68931994	True	NA	-3	True	AGTAAA	-25	NA	68932582	68731763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_68733154_68739115_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_100793.known	chr3	-	2229	6	FSM	ENSG00000163377.16	ENST00000295569.12	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	12.5315601582564	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931959	True	NA	-5	True	AGTAAA	-23	NA	68932547	68731765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932239
transcript_100794.nic	chr3	-	2147	6	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	15.551205741035	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931959	True	NA	-5	True	AGTAAA	-23	NA	68932547	68731765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_68733154_68739074_68739200_68752862_68753019_68880729_68880846_68885174_68885311_68932321
transcript_100797.nnic	chr3	-	2108	5	NIC	ENSG00000163377.16	novel	2229	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.0078105935821	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGTTTTTGTGATTATT	-68931994	True	NA	-5	True	AGTAAA	-23	NA	68932582	68731765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_68733154_68739074_68739200_68880729_68880846_68885174_68885311_68932239
transcript_100805.known	chr3	-	1931	1	FSM	ENSG00000163378.14	ENST00000615922.1	1931	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCAGAACCATTTTTAA	-68977136	False	NA	-31	True	AATAAA	-20	NA	68977157	68975226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_68975200_68977200
transcript_100815.known	chr3	-	2111	18	FSM	ENSG00000144744.17	ENST00000361055.9	2111	18	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_17	89.9290377681761	1384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071442	True	NA	-12	True	AATAAA	-16	NA	69080365	69054729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080111_69080154_69080333
transcript_100821.known	chr3	-	4867	17	FSM	ENSG00000144747.17	ENST00000646708.1	4867	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	24.1601913020158	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCTGGCGTGGTGGTGT	-69049450	True	NA	NA	False	AATACA	-5	NA	69052333	69021847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69023321_69024054_69024181_69025559_69025713_69025995_69026098_69027899_69027993_69028225_69028296_69029814_69030008_69033547_69033705_69035022_69035116_69038563_69038721_69038842_69039010_69039550_69039694_69042806_69042913_69043749_69043877_69044491_69044596_69047348_69048563_69051944
transcript_10083.known	chr1	+	1179	6	FSM	ENSG00000159208.16	ENST00000369094.5	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.0174904401407	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282619_150283461_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_10084.known	chr1	+	771	6	FSM	ENSG00000159208.16	ENST00000447007.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	20.370567002418	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACAGCATCTCCTGTCA	150281916	True	NA	NA	False	NA	NA	NA	150282542	150286737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282619_150283513_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_10085.nnic	chr1	+	1120	6	NNC	ENSG00000159208.16	novel	1433	6	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	29.1094486378564	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281898	True	NA	24	True	ATTAAA	-21	NA	150282524	150287093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_150282619_150283538_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_100853.known	chr3	-	652	3	FSM	ENSG00000144744.17	ENST00000485424.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_2	79	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAGTGTTCACTTATAT	-69071440	True	NA	NA	False	AATAGA	-35	NA	69080363	69077338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69077919_69080111_69080154_69080333
transcript_100858.known	chr3	-	2112	17	FSM	ENSG00000144744.17	ENST00000349511.8	2112	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_16	210.794544150815	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071485	True	NA	-12	True	AATAAA	-16	NA	69080408	69054729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69075429_69075511_69077797_69077919_69080333
transcript_100859.known	chr3	-	2004	16	FSM	ENSG00000144744.17	ENST00000415609.6	2004	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	299.797146232063	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACTGAAGTTTTT	-69071458	True	NA	-12	True	AATAAA	-16	NA	69080381	69054729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69055526_69055850_69055906_69055999_69056064_69056182_69056284_69056611_69056694_69056778_69056816_69057255_69057310_69061813_69061928_69062076_69062180_69062981_69063138_69063438_69063504_69064067_69064112_69067927_69068009_69071534_69071618_69077797_69077919_69080333
transcript_10086.known	chr1	+	1433	6	FSM	ENSG00000159208.16	ENST00000369095.5	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	26.0338241524368	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281916	True	NA	24	True	ATTAAA	-21	NA	150282542	150287093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150282619_150283207_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_100860.known	chr3	+	2134	3	FSM	ENSG00000144746.7	ENST00000273258.4	2134	3	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	53	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTCTTAAATACCTGA	NA	False	NA	29	True	AATAAA	-41	NA	69084936	69106092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69085224_69101838_69102057_69104463
transcript_100862.known	chr3	+	387	3	FSM	ENSG00000144746.7	ENST00000485444.1	387	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTTGTGTGGGCAGCC	69084395	True	NA	NA	False	NA	NA	NA	69085041	69101894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69085224_69089811_69089961_69101838
transcript_100863.known	chr3	-	846	6	FSM	ENSG00000114541.15	ENST00000459638.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.63818119165458	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCCCCGTTTGTCATG	-69541730	True	NA	NA	False	NA	NA	NA	69542583	69287750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_69287837_69302342_69302436_69311262_69311358_69313451_69313518_69432633_69432762_69542205
transcript_100867.known	chr3	+	4799	10	FSM	ENSG00000187098.18	ENST00000352241.9	4799	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.40370085030933	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTGGTGGCCTATTGTG	69739380	True	NA	NA	False	ATTAAA	-16	NA	69739463	69968332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951811_69951887_69956454_69956531_69959272_69959421_69964846
transcript_100868.known	chr3	+	4767	10	FSM	ENSG00000187098.18	ENST00000642352.1	4767	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCCTATTGTGTTAA	69739398	True	NA	NA	False	ATTAAA	-20	NA	69739481	69968336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_69739702_69879133_69879384_69937821_69938050_69939097_69939182_69941235_69941332_69949050_69949169_69951829_69951887_69956454_69956531_69959272_69959421_69964846
transcript_100877.known	chr3	-	560	3	FSM	ENSG00000114861.24	ENST00000470112.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTGAAGAGTCATAAATAAC	-71305027	True	NA	NA	False	AATGAA	-28	NA	71306015	71296084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_71296446_71299819_71299881_71305877
transcript_100879.nic	chr3	-	399	2	ISM	ENSG00000114861.24	ENST00000470112.1	560	3	-78	3613	-40	-3	5prime_fragment	FALSE	canonical	3	13	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATATGTGGTGTATTTT	NA	False	NA	NA	False	AATAAA	-22	NA	71306093	71299697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_71299881_71305877
transcript_100881.known	chr3	-	9978	7	FSM	ENSG00000163412.13	ENST00000425534.8	9978	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	17.5119007154183	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTCTGTCTCACT	-71722975	True	NA	NA	False	ATTAAA	-16	NA	71725402	71675413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_71684729_71690009_71690166_71693874_71693942_71696459_71696521_71699613_71699709_71710411_71710485_71725191
transcript_100883.known	chr3	-	1755	8	FSM	ENSG00000241163.9	ENST00000665453.1	1755	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.41593350361254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCCTTGAAATCGTC	-72100796	True	NA	-12	True	AATAAA	-24	NA	72100901	72035754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72036174_72036324_72036521_72055860_72055963_72059686_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_100886.known	chr3	-	2030	7	FSM	ENSG00000241163.9	ENST00000608654.6	2030	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5603819159562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCCTTGAAATCGTCTC	-72100878	True	NA	-10	True	AATAAA	-26	NA	72100983	72035752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72036174_72036324_72036521_72055860_72055963_72059686_72060110_72060509_72061095_72099903_72100011_72100787
transcript_100887.known	chr3	-	1947	7	FSM	ENSG00000241163.9	ENST00000671527.1	1947	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.97905701450632	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGCCTTGAAATCGTC	-72100837	True	NA	-12	True	AATAAA	-24	NA	72100942	72035754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72036521_72055860_72055963_72059686_72060110_72060509_72060612_72060802_72061095_72099903_72100011_72100787
transcript_10089.nic	chr1	+	1136	5	NIC	ENSG00000159208.16	novel	1179	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	26.0516314268416	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281883	True	NA	24	True	ATTAAA	-21	NA	150282509	150287093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150282619_150283461_150283634_150284425_150284505_150284596_150284709_150286429
transcript_100895.known	chr3	-	235	3	FSM	ENSG00000241163.9	ENST00000462492.6	439	3	50	154	-9	-154	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTGTAAAAATCAGGGC	-72100764	True	NA	NA	False	NA	NA	NA	72100869	72092428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72092475_72099903_72100011_72100787
transcript_100898.known	chr3	-	2057	3	FSM	ENSG00000241163.9	ENST00000668763.1	2057	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTTGCAATTTTGCC	-72100852	True	NA	NA	False	ATTAAA	-25	NA	72100957	72097231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72099012_72099903_72100011_72100787
transcript_1009.known	chr1	+	2228	1	FSM	ENSG00000224870.8	ENST00000572242.1	2228	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGCAAATTACTCTGTC	1397897	False	NA	14	True	TATAAA	-7	NA	1399805	1402033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1399800_1402000
transcript_100900.known	chr3	-	7217	4	FSM	ENSG00000163602.12	ENST00000477973.5	7215	4	-2	0	-2	0	multi-exon	FALSE	canonical	3	18	junction_3	2.62466929133727	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTTACTGTCCTGTTATTA	-72446589	False	NA	1	True	ATTAAA	-22	NA	72446623	72371824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72378638_72379039_72379139_72379250_72379428_72446495
transcript_100905.known	chr3	+	1448	2	FSM	ENSG00000287595.2	ENST00000659534.1	1448	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTACTGTTTGAAGCAG	72738880	True	NA	NA	False	AATAAA	-3	NA	72738917	72740525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72739035_72739194
transcript_100907.known	chr3	-	2846	11	FSM	ENSG00000144736.14	ENST00000325599.13	2846	11	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_6	14.9666295470958	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCATGTGGACGTATGC	-72845541	True	NA	-6	True	AATAAA	-25	NA	72848445	72749276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_100911.nic	chr3	-	1795	9	NIC	ENSG00000144736.14	novel	502	5	NA	NA	-4	664	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	56.4068646088399	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGAGGAGAGGAAA	-72845572	True	NA	NA	False	AGTAAA	-42	NA	72848476	72813832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_72814556_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844424_72848197
transcript_100913.known	chr3	-	2844	11	FSM	ENSG00000144736.14	ENST00000444040.6	2844	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.9762910915524	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTCATGTGGACGTAT	-72845511	True	NA	-8	True	AATAAA	-23	NA	72848415	72749278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_72750837_72792915_72793037_72812670_72812795_72815349_72815404_72817229_72817385_72824423_72824552_72832368_72832482_72841044_72841200_72842279_72842403_72844358_72844454_72848197
transcript_100914.known	chr3	+	3276	7	FSM	ENSG00000172986.13	ENST00000389617.9	3276	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.34613493680177	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAGAGACAATGATCTGGA	72887694	True	NA	94	True	ATTAAA	-21	NA	72888045	72976915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72888509_72908366_72908560_72922203_72922336_72955097_72955350_72957228_72957353_72967546_72967720_72974976
transcript_100921.known	chr3	+	4957	9	FSM	ENSG00000163605.15	ENST00000356692.10	4957	9	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_7	34.8568501158667	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGTGTGTAATTATT	72977829	True	NA	12	True	AATAAA	-16	NA	72996810	73069198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002_73064147_73064851_73065142_73065396
transcript_100939.nic	chr3	+	903	7	ISM	ENSG00000163605.15	ENST00000356692.10	4957	9	-56	5070	-48	-838	5prime_fragment	FALSE	canonical	3	784	junction_2	29.3905691601159	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAGAAAAATCACAGGT	NA	False	NA	5	True	NA	NA	NA	72996754	73064128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022_73061061_73063672_73063748_73064002
transcript_100943.known	chr3	+	1033	5	FSM	ENSG00000163605.15	ENST00000470976.1	1033	5	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_2	31.5941054628866	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATATAGCAAAGTAAGAAT	72977836	True	NA	NA	False	NA	NA	NA	72996817	73061454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72997072_72998076_72998159_73047185_73047357_73059036_73059131_73061022
transcript_100944.known	chr3	+	559	4	FSM	ENSG00000163605.15	ENST00000495566.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	397.866253350992	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATGCTGTTTAATTAAGC	72996944	False	NA	NA	False	AATAAA	-14	NA	72996976	73016134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_72997072_72998076_72998159_73014914_73014984_73015821
transcript_100949.nic	chr3	+	505	2	ISM	ENSG00000163605.15	ENST00000495566.1	559	4	-222	17870	-48	-17870	5prime_fragment	FALSE	canonical	3	845	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGAAGTCCTGGTCATT	NA	False	NA	NA	False	ATTAAA	-15	NA	72996754	72998264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_72997072_72998076
transcript_100950.nnic	chr3	+	488	2	NNC	ENSG00000287398.1	novel	790	3	NA	NA	-17	-25724	at_least_one_novel_splicesite	FALSE	canonical	3	609	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGATTTGCTTTTGTAA	75214390	True	NA	NA	False	NA	NA	NA	75214492	75215046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_75214556_75214621
transcript_100956.known	chr3	-	839	5	FSM	ENSG00000244026.7	ENST00000489609.6	876	5	37	0	13	0	multi-exon	FALSE	canonical	2	4	junction_1	29.2350389088163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTGCAGATAAAAAAGT	-75433522	True	NA	NA	False	NA	NA	NA	75435035	75422717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75423143_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_100957.known	chr3	-	1068	5	FSM	ENSG00000244026.7	ENST00000478666.6	2014	5	79	867	2	299	multi-exon	FALSE	canonical	3	45	junction_2	14.7711712467224	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTACTGCAGAGGTCAC	-75433533	True	NA	NA	False	NA	NA	NA	75435046	75422418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75423062_75426449_75426600_75430831_75430915_75432807_75432871_75434917
transcript_10096.known	chr1	+	2011	5	FSM	ENSG00000159208.16	ENST00000290363.6	2011	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	8.49632273398321	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCTGATTGGGGGAA	150281927	True	NA	24	True	ATTAAA	-21	NA	150282553	150287093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150283634_150283804_150283881_150284425_150284505_150284596_150284709_150286429
transcript_100973.known	chr3	-	1392	5	FSM	ENSG00000244026.7	ENST00000491583.1	1392	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.8843582110896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCTTTCTTCAGATAC	-75433456	False	NA	NA	False	AAAAAG	-29	NA	75434969	75425275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75426105_75426449_75426622_75430831_75430915_75432807_75432871_75434724
transcript_100984.known	chr3	+	532	4	FSM	ENSG00000272690.6	ENST00000659018.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAGGATGAGTTATCT	75434995	True	NA	NA	False	AATAAA	-16	NA	75435333	75452651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75435414_75443507_75443647_75451209_75451403_75452531
transcript_100988.nnic	chr3	+	400	3	NIC	ENSG00000272690.6	novel	872	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGGATGAGTTATCTTG	75434936	True	NA	NA	False	AATAAA	-18	NA	75435274	75452653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75435414_75443507_75443647_75452531
transcript_100989.known	chr3	+	1089	3	FSM	ENSG00000272690.6	ENST00000654265.1	1089	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTGACTGAGTAATTA	75434995	True	NA	NA	False	AATAAA	-15	NA	75435333	75457486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75435414_75443507_75443647_75456616
transcript_100992.nnic	chr3	+	1304	3	NIC	ENSG00000272690.6	novel	1089	3	NA	NA	0	628	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTTGTCTCTGTGTCTTA	75434936	True	NA	NA	False	NA	NA	NA	75435274	75538657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75435414_75443507_75443647_75537631
transcript_1010.known	chr1	-	700	4	FSM	ENSG00000242485.6	ENST00000344843.12	700	4	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	57.2033410057684	15826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGTCATTTTCTG	-1392303	True	NA	-22	True	AATGAA	-17	NA	1407293	1401908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1402257_1405808_1405887_1406908_1407020_1407130
transcript_101005.nnic	chr3	-	1082	2	NNC	ENSG00000243422.3	novel	1138	3	NA	NA	-16226	-105	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTCTAGGAGTTTGCTGA	-75641361	False	NA	NA	False	AAAACA	-16	NA	75641379	75624379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_75625154_75641071
transcript_101006.nnic	chr3	-	843	2	NNC	ENSG00000243422.3	novel	1138	3	NA	NA	-16226	67	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTGACAACTTAATTAGAA	-75641361	False	NA	NA	False	CATAAA	-17	NA	75641379	75624618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_75625154_75641071
transcript_101009.nnic	chr3	-	1024	2	FSM	ENSG00000243422.3	ENST00000686530.1	1020	2	-8	4	-8	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATGTATATTGTTATTTA	-75670111	True	NA	-6	True	AATAAA	-16	NA	75670164	75667546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75668426_75670019
transcript_101010.known	chr3	+	2075	4	FSM	ENSG00000172969.8	ENST00000464571.1	2075	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTATCTTCACTTCTGC	75664317	True	NA	NA	False	AATAAA	-17	NA	75664329	75667220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75664558_75664821_75664897_75665125_75665204_75665526
transcript_101027.nnic	chr3	-	1304	7	NNC	ENSG00000227124.11	novel	1169	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_6	18.2155306141643	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782641	True	NA	-5	True	AATAAA	-30	NA	75785586	75729960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75784783_75784886_75785383
transcript_101031.nic	chr3	-	1421	7	NIC	ENSG00000227124.11	novel	1169	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	17.5760253375633	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782641	True	NA	-5	True	AATAAA	-30	NA	75785586	75729960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75784783_75785003_75785383
transcript_101037.nic	chr3	-	688	6	NIC	ENSG00000227124.11	novel	2341	6	NA	NA	-13	-1601	combination_of_known_junctions	TRUE	canonical	2	7	junction_2	20.370567002418	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAAGCATTCATTTTGT	NA	False	NA	NA	False	AGTAAA	-20	NA	75785596	75711243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_75711317_75716418_75716542_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_101043.known	chr3	-	1169	6	FSM	ENSG00000227124.11	ENST00000477374.5	1169	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	15.8568597143318	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGACTTTTTCTTGTCAT	-75782608	True	NA	-5	True	AATAAA	-30	NA	75785553	75729960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75730619_75732059_75732122_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_10105.known	chr1	+	1462	2	FSM	ENSG00000266472.6	ENST00000581066.2	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	3974	junction_1	0	7093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	150272574	True	NA	8	True	AATAAA	-17	NA	150293919	150308979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150294450_150308047
transcript_10106.known	chr1	+	1085	3	FSM	ENSG00000266472.6	ENST00000614145.5	1085	3	0	0	0	0	multi-exon	FALSE	canonical	3	2125	junction_1	924.5	21021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAGAAGTAAGGAATTTT	150272515	True	NA	8	True	AATAAA	-17	NA	150293860	150308979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150293899_150294334_150294450_150308047
transcript_101069.known	chr3	-	3923	5	FSM	ENSG00000227124.11	ENST00000652011.2	3923	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.6852484422014	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGCCTCTATTTTGATG	-75782604	True	NA	-1	True	AATAAA	-17	NA	75785549	75735867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_75739346_75741275_75741369_75741609_75741737_75783305_75783365_75785383
transcript_101082.nic	chr3	-	1193	4	ISM	ENSG00000227124.11	ENST00000652011.2	3923	5	-47	4707	-13	-1283	5prime_fragment	FALSE	canonical	3	29	junction_3	13.6381816969859	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGCTGAGTACGGTGA	NA	False	NA	NA	False	NA	NA	NA	75785596	75740574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_75741369_75741609_75741737_75783305_75783365_75785383
transcript_10109.known	chr1	+	2414	16	FSM	ENSG00000117360.13	ENST00000324862.7	2414	16	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_1	54.2121757541606	1781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGTCTACAGGTGATC	150313053	True	NA	53	True	TTTAAA	-39	NA	150321532	150353233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150321593_150324894_150325088_150325750_150325882_150328319_150328467_150332683_150332768_150332978_150333200_150334934_150335242_150338159_150338327_150340397_150340478_150343308_150343453_150344161_150344262_150344433_150344548_150346017_150346137_150346407_150346492_150349156_150349219_150352832
transcript_101090.known	chr3	+	1344	6	FSM	ENSG00000242516.3	ENST00000463183.2	1344	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	9.26498785752038	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75670996	False	NA	29	True	AATAAA	-34	NA	75672390	75679314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75675967_75676129_75678832
transcript_101094.known	chr3	+	1767	5	FSM	ENSG00000242516.3	ENST00000669013.1	1767	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	15.3846514422654	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTTGTATAATGACTT	75671190	False	NA	20	True	TATAAA	-17	NA	75672584	75680092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75673846_75674007_75675763_75675881_75678832
transcript_101095.known	chr3	+	880	5	FSM	ENSG00000242516.3	ENST00000662338.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.6183802907977	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75672455	True	NA	29	True	AATAAA	-34	NA	75672694	75679314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967_75676129_75678832
transcript_101096.nic	chr3	+	900	4	ISM	ENSG00000242516.3	ENST00000662338.1	880	5	-5	2689	-5	0	5prime_fragment	FALSE	canonical	3	13	junction_2	12.0369800568452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATCAAATGTTGTTATC	75672450	True	NA	NA	False	AATAAA	-14	NA	75672689	75676625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_75672770_75673193_75673239_75675763_75675881_75675967
transcript_101097.known	chr3	+	716	4	FSM	ENSG00000242516.3	ENST00000665741.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	17.1075032271418	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75673193_75673239_75675763_75675881_75678832
transcript_101098.nnic	chr3	+	594	3	NIC	ENSG00000242516.3	novel	880	5	NA	NA	0	5	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	19	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAACAATTTATATACCTC	75672455	True	NA	21	True	AATAAA	-26	NA	75672694	75679306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_75672770_75673193_75673239_75678832
transcript_1011.known	chr1	+	2196	2	FSM	ENSG00000224870.8	ENST00000418833.2	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAAACAAACTGCAAATTA	1397621	True	NA	7	True	GATAAA	-12	NA	1399529	1402026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1400304_1400604
transcript_101100.known	chr3	+	671	3	FSM	ENSG00000242516.3	ENST00000656252.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	15	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGATAGAACAATTTATA	75672444	True	NA	15	True	AATAAA	-20	NA	75672683	75679300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75675763_75675881_75678832
transcript_101101.known	chr3	+	822	4	FSM	ENSG00000242516.3	ENST00000666754.1	822	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.08248290463863	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATACCTCTGGGTATA	75672468	True	NA	29	True	AATAAA	-34	NA	75672707	75679314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75672770_75675763_75675881_75675967_75676129_75678832
transcript_101108.nic	chr3	+	1435	2	ISM	ENSG00000185008.17	ENST00000332191.12	5437	27	-635	548420	209	483	5prime_fragment	FALSE	canonical	3	17	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAAATTATCCGGG	77040075	False	NA	NA	False	AATACA	-5	NA	77040094	77098696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_77040847_77098013
transcript_101109.known	chr3	+	5919	27	FSM	ENSG00000185008.17	ENST00000487694.7	5919	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.44789109217948	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGTCCTGCCTCATT	75906682	False	NA	NA	False	AATAAA	-24	NA	75906694	77647510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_75906961_75937480_75937603_77098013_77098341_77477413_77477572_77481098_77481220_77493243_77493383_77522774_77522903_77546337_77546463_77550817_77550990_77557943_77558150_77562650_77562733_77563166_77563330_77564953_77565121_77568312_77568435_77574498_77574731_77577489_77577615_77579946_77580119_77588750_77588934_77595141_77595185_77596622_77596751_77602209_77602492_77607797_77607955_77617512_77617774_77622226_77622433_77634869_77635044_77644703_77644905_77646053
transcript_101113.known	chr3	+	701	3	FSM	ENSG00000242781.2	ENST00000658456.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTAGTGTCTGGTATTAT	NA	False	NA	NA	False	AATAAA	-17	NA	80770578	80789387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_80770956_80788796_80788970_80789236
transcript_101114.known	chr3	-	2941	16	FSM	ENSG00000114480.13	ENST00000429644.7	2941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.7318058827539	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTGCTAATGTTTAT	-81761358	True	NA	-5	True	AATAAA	-15	NA	81761645	81489702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_81490464_81499109_81499228_81535194_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_101116.nic	chr3	-	2262	14	ISM	ENSG00000114480.13	ENST00000429644.7	2941	16	-123	45415	-123	-451	5prime_fragment	FALSE	canonical	3	64	junction_7	11.9510837318991	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGGTTGATCTTGATG	-81761712	True	NA	NA	False	NA	NA	NA	81761768	81535117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_81535326_81536910_81537096_81577924_81578097_81581164_81581276_81586091_81586191_81591036_81591165_81593907_81594024_81642780_81642991_81646391_81646483_81648855_81648992_81649795_81649922_81670837_81670954_81705443_81705614_81761374
transcript_101121.known	chr3	+	1006	2	FSM	ENSG00000175161.14	ENST00000485126.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATCAACACATTGACTT	84956713	True	NA	2	True	ATTAAA	-14	NA	84959004	84960438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_84959669_84960096
transcript_101123.nnic	chr3	+	465	3	Antisense	novelGene_ENSG00000206538.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTTGGTACTTTTTT	NA	False	NA	4	True	AATAAA	-19	NA	86876986	86883010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_86877148_86880084_86880190_86882811
transcript_101125.nnic	chr3	+	447	2	Antisense	novelGene_ENSG00000206538.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTTTGGGTATTTC	NA	False	NA	3	True	AGTAAA	-17	NA	86876986	86880370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_86877148_86880084
transcript_101127.nnic	chr3	+	1140	2	Antisense	novelGene_ENSG00000206538.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTTATATTTTGTA	NA	False	NA	NA	False	TATAAA	-30	NA	86876801	86880878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_86877148_86880084
transcript_101131.known	chr3	+	2644	7	FSM	ENSG00000083937.10	ENST00000676705.1	2644	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	177.693243790778	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTTCTTACCTTTTT	87221806	True	NA	24	True	AATAAA	-14	NA	87227311	87255486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87240326_87240454_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_101133.known	chr3	+	1175	6	FSM	ENSG00000083937.10	ENST00000494980.5	1175	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	153.029931712721	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGCTTGTCTTTTGTA	87221796	True	NA	11	True	ATTAAA	-21	NA	87227301	87254224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245819_87249874_87249978_87253403_87253511_87253711
transcript_101135.known	chr3	+	2590	6	FSM	ENSG00000083937.10	ENST00000263780.9	2590	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	32.4653661614959	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAAAAGAATGATCTT	87221803	True	NA	94	True	ATTAAA	-22	NA	87227308	87255556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87240698_87240791_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_101139.known	chr3	+	2528	5	FSM	ENSG00000083937.10	ENST00000471660.5	2528	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	158.667104341133	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTAATTTTTCAAAAGA	87221765	True	NA	86	True	ATTAAA	-14	NA	87227270	87255548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_87227557_87245713_87245909_87249874_87249978_87253403_87253511_87253711
transcript_101142.known	chr3	+	6460	9	FSM	ENSG00000175105.8	ENST00000636215.2	6460	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	8.70972875582242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGTTCAATTTTATGT	88058181	True	NA	4	True	AATAAA	-17	NA	88059254	88144660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060_88135203_88138704_88141049_88141644
transcript_101145.known	chr3	+	1377	7	FSM	ENSG00000175105.8	ENST00000473136.4	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	9.79795897113271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAATTTGCAAATAAACTT	88058200	True	NA	NA	False	NA	NA	NA	88059273	88135498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133_88126270_88128808_88129012_88129686_88129827_88135060
transcript_101150.nic	chr3	+	982	4	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-80	8923	-61	-2480	5prime_fragment	FALSE	canonical	3	33	junction_3	5.90668171555645	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTTTTTTTTTTTTT	88058120	True	NA	NA	False	ATTAAA	-18	NA	88059193	88126575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_88059506_88086256_88086403_88113114_88113197_88126133
transcript_101151.known	chr3	-	4548	4	FSM	ENSG00000163320.12	ENST00000482016.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	373.652542105928	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAATCTTACTGAGTTAT	-88048790	True	NA	48	True	AATATA	-19	NA	88059005	88051949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88057190_88057293_88058018_88058224_88058814
transcript_101152.known	chr3	-	1063	4	FSM	ENSG00000163320.12	ENST00000462901.5	1063	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	337.534524983083	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTTGATTGTGTGG	NA	False	NA	-24	True	ATTAAA	-1	NA	88149885	88055425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88058018_88058224_88140969_88141079_88149710
transcript_101157.known	chr3	-	4495	3	FSM	ENSG00000163320.12	ENST00000309534.10	4495	3	0	0	0	0	multi-exon	FALSE	canonical	3	721	junction_1	83.5	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTGAGTTATTTTTCT	-88048833	True	NA	54	True	AATATA	-25	NA	88059048	88051943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_88056000_88058018_88058224_88058814
transcript_101163.nic	chr3	+	500	2	ISM	ENSG00000175105.8	ENST00000473136.4	1377	7	-80	49054	-61	-42611	5prime_fragment	TRUE	canonical	3	46	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGAGAATTTGTTTT	88058120	True	NA	NA	False	TATAAA	-18	NA	88059193	88086444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_88059506_88086256
transcript_101166.nic	chr3	-	656	2	ISM	ENSG00000163320.12	ENST00000467332.1	556	3	-89	84959	-19	-82979	5prime_fragment	FALSE	canonical	2	8	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGTCCATTGACT	NA	False	NA	NA	False	ACTAAA	-14	NA	88149904	88140616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_88141079_88149710
transcript_101167.known	chr3	+	2414	3	FSM	ENSG00000179021.10	ENST00000318887.8	2414	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	15	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGTGTATCGTTCAGAT	88148232	True	NA	18	True	AATAAA	-29	NA	88149958	88157965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88150186_88153229_88153472_88156020
transcript_101170.known	chr3	+	1259	3	FSM	ENSG00000179021.10	ENST00000486971.1	1259	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	63	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAATATTTTCCTTTTACT	88148260	True	NA	30	True	AATAAA	-44	NA	88149986	88156944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_88150186_88153229_88153472_88156126
transcript_101173.known	chr3	+	3971	10	FSM	ENSG00000169379.17	ENST00000394222.8	3971	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	12.212117034697	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAAGAAATGTAGTTTG	93979543	True	NA	NA	False	TATAAA	-20	NA	93980154	94055678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_93980483_93995873_93995945_94003658_94003909_94035330_94035437_94036551_94036755_94039879_94039989_94043014_94043241_94049405_94049523_94050823_94050893_94053186
transcript_101184.known	chr3	+	6431	6	FSM	ENSG00000178694.10	ENST00000314622.9	6431	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	4.3081318457076	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTACTGAATTTTTT	94062369	True	NA	13	True	AATAAA	-16	NA	94063060	94131832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_94063139_94064436_94064547_94084106_94084451_94094139_94094295_94095032_94095155_94126210
transcript_101194.known	chr3	+	1399	3	FSM	ENSG00000169379.17	ENST00000492165.3	1399	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTGTCATGTGGTTAG	93979530	True	NA	NA	False	ATTAAA	-12	NA	93980141	94004645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_93980483_93995873_93995945_94003658
transcript_101198.known	chr3	-	3856	2	FSM	ENSG00000178700.9	ENST00000314636.3	3856	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCTGAATCTCTAATA	-94062754	True	NA	-9	True	AATAAA	-17	NA	94062916	94057921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_94061607_94062745
transcript_101199.known	chr3	+	751	2	FSM	ENSG00000178694.10	ENST00000477077.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTGTCAGCAACTTTTT	94062288	True	NA	NA	False	AGTAAA	-13	NA	94062979	94064403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_94063139_94063811
transcript_1012.known	chr1	-	1693	3	FSM	ENSG00000242485.6	ENST00000487659.1	1693	3	0	0	0	0	multi-exon	FALSE	canonical	3	1975	junction_1	32.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTTTAGAGTCATTT	-1392278	True	NA	-26	True	AATGAA	-13	NA	1407268	1401912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1402257_1405808_1407020_1407130
transcript_10120.nic	chr1	+	1357	4	ISM	ENSG00000163125.16	ENST00000369068.5	8186	11	0	34333	0	610	5prime_fragment	FALSE	canonical	3	42	junction_3	13.0213499897497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATACTTGATAGTGTC	150362555	True	NA	NA	False	NA	NA	NA	150364146	150442233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150364920_150417595_150417726_150440922_150441024_150441880
transcript_101203.known	chr3	+	1078	4	FSM	ENSG00000080224.18	ENST00000506569.1	1078	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.09901951359278	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTTATTTTG	96814773	True	NA	NA	False	ATTAAA	-22	NA	96814790	97010134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_96815009_96866824_96866890_96987329_96987994_97010003
transcript_101207.known	chr3	+	1590	9	FSM	ENSG00000113966.10	ENST00000394206.5	1590	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.2886290267689	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	10	True	AATAAA	-20	NA	97764520	97798535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97766631_97766691_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_101209.known	chr3	+	1630	9	FSM	ENSG00000113966.10	ENST00000335979.6	1630	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.3073888498905	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTAGTGCGCTTTGTTTAT	NA	False	NA	10	True	AATAAA	-20	NA	97764520	97798535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97765990_97766090_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_10121.known	chr1	+	1043	3	FSM	ENSG00000163125.16	ENST00000369067.7	1043	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTGGTATTTTTAAGCC	150363045	True	NA	NA	False	TTTAAA	-45	NA	150364707	150441623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150364920_150417595_150417726_150440922
transcript_101211.known	chr3	+	3988	8	FSM	ENSG00000113966.10	ENST00000463745.6	3988	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	10.1900311429297	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGTGATTAAGAAATGG	97764248	True	NA	57	True	AATAAA	-35	NA	97764757	97801229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023
transcript_101215.known	chr3	+	851	7	FSM	ENSG00000113966.10	ENST00000496713.1	851	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	21.6056834086672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATATCAAATTCCATTT	97764257	True	NA	NA	False	NA	NA	NA	97764766	97791347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791213
transcript_10122.known	chr1	+	2727	18	FSM	ENSG00000143374.18	ENST00000369064.8	2727	18	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_8	43.8782524499584	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485462	True	NA	15	True	AATAAA	-29	NA	150487418	150507602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_101222.nic	chr3	+	1123	5	ISM	ENSG00000113966.10	ENST00000496713.1	851	7	-234	5996	0	-2652	5prime_fragment	FALSE	canonical	3	48	junction_1	6.22494979899437	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAGATGGAAAAATAAAATA	NA	False	NA	NA	False	CATAAA	-29	NA	97764532	97785351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_97764978_97768080_97768231_97780158_97780221_97780614_97780684_97784954
transcript_101224.known	chr3	-	460	3	FSM	ENSG00000282527.2	ENST00000631985.2	500	3	39	1	39	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTACTTTG	-97821873	False	NA	NA	False	AATAAA	-20	NA	97821884	97800732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_97800895_97818403_97818504_97821686
transcript_101225.known	chr3	+	894	7	FSM	ENSG00000113966.10	ENST00000462412.2	894	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.0416357107308	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATTCCAATCTTATTCTT	NA	False	NA	NA	False	ATTAAA	-7	NA	97764532	97788003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97766631_97766691_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989
transcript_101226.known	chr3	+	1705	10	FSM	ENSG00000113966.10	ENST00000493990.5	1705	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	24.9166511829507	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTGTACCTATTTTC	NA	False	NA	6	True	ATTAAA	-18	NA	97764520	97801109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97764978_97765990_97766090_97768080_97768231_97780158_97780221_97780614_97780684_97784954_97785050_97787989_97788120_97791770_97791827_97798023_97798204_97800702
transcript_10123.nic	chr1	+	2644	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_14	86.4667340296255	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485443	True	NA	15	True	AATAAA	-29	NA	150487399	150507602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496481_150496629_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504905_150504979_150505590_150505706_150506915
transcript_101231.known	chr3	+	10779	22	FSM	ENSG00000080200.10	ENST00000389622.7	10779	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	13.7758209421575	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGGTAATTTGCTGTTC	97820098	True	NA	29	True	AATAAA	-34	NA	97822010	97944984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_97822356_97843194_97843262_97864216_97864648_97871841_97878038_97879703_97879749_97879984_97880101_97881071_97881220_97886630_97886768_97888340_97888456_97889354_97889391_97892859_97892994_97895958_97896086_97898882_97899026_97899136_97899264_97900452_97900486_97912166_97912277_97915609_97915737_97933693_97933834_97936784_97936909_97941147_97941307_97942283_97942444_97943225
transcript_101233.known	chr3	-	2232	10	FSM	ENSG00000170854.18	ENST00000360258.8	2232	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	38.0383172636082	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGTGGGTCTTCGAGTTT	-97972076	False	NA	NA	False	TATAAA	-11	NA	97972087	97944559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950013_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97971913
transcript_101234.known	chr3	-	4854	10	FSM	ENSG00000170854.18	ENST00000394198.7	4854	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	15.098033556856	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTAGTGTTCTATTC	-97971032	True	NA	-3	True	AATAAA	-17	NA	97972431	97941817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_97945343_97945797_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_101239.nic	chr3	-	1809	9	NIC	ENSG00000170854.18	novel	4854	10	NA	NA	6	0	intron_retention	FALSE	canonical	3	71	junction_3	15.7142451298177	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTTCGCTTCCCTTTGT	-97971052	True	NA	NA	False	AATAAA	-19	NA	97972451	97945337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_97945888_97947360_97947450_97949843_97950016_97950785_97950889_97954391_97954496_97959050_97959180_97961588_97961709_97967161_97967633_97972380
transcript_101247.known	chr3	-	871	6	FSM	ENSG00000080822.17	ENST00000511667.5	871	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	380.846740828906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGAAGGCATATCGTGTG	-98512507	True	NA	-100	True	NA	NA	NA	98522964	98516684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521378_98521652_98521719_98522848
transcript_101248.known	chr3	-	865	6	FSM	ENSG00000080822.17	ENST00000502299.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_4	376.912509741982	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGGAAAGAGTACACCTTA	-98512474	True	NA	NA	False	NA	NA	NA	98522931	98516702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521438_98521652_98521704_98522848
transcript_101249.known	chr3	-	573	6	FSM	ENSG00000080822.17	ENST00000510541.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	373.394911588254	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTGGCTTGTGTCTCTG	-98512445	True	NA	NA	False	NA	NA	NA	98522902	98516773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521329_98521443_98521652_98521704_98522848
transcript_10125.nnic	chr1	+	2599	17	NIC	ENSG00000143374.18	novel	2727	18	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_7	80.2495862528275	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGGTCATATGTCTTC	150485443	True	NA	15	True	AATAAA	-29	NA	150487399	150507602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150496809_150496909_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_101253.known	chr3	-	999	5	FSM	ENSG00000080822.17	ENST00000513287.5	999	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	341.352731789274	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGCCTGCTTTACAATTG	-98512297	False	NA	-68	True	AATGAA	-26	NA	98522754	98516652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98521132_98521443_98522541
transcript_101255.known	chr3	-	569	5	FSM	ENSG00000080822.17	ENST00000503799.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	318.903198478786	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGGGGCTTTGATCGGA	-98512418	True	NA	NA	False	NA	NA	NA	98522875	98517138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98517190_98518884_98519015_98521132_98521443_98521652_98521704_98522848
transcript_101256.known	chr3	-	214	1	FSM	ENSG00000250562.1	ENST00000502376.1	214	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCCACACTGATTTGAA	NA	False	NA	NA	False	NA	NA	NA	98525274	98525060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98525100_98525300
transcript_101257.known	chr3	-	642	4	FSM	ENSG00000080822.17	ENST00000511081.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	324.988546806738	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCTATTTTATTTATAC	-98512448	True	NA	41	True	NA	NA	NA	98522905	98516543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98516880_98517051_98517190_98518884_98518996_98522848
transcript_101258.known	chr3	-	598	3	FSM	ENSG00000080822.17	ENST00000513988.1	598	3	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_2	68.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATATTTTAGAAGGTAGAT	-98512418	True	NA	NA	False	AATAAA	-34	NA	98522875	98518734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98518996_98521132_98521443_98522848
transcript_101265.known	chr3	-	6128	16	FSM	ENSG00000057019.16	ENST00000326840.11	6128	16	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_5	30.1897701584862	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTATGGCCAATATTG	-98895885	True	NA	-2	True	TATAAA	-28	NA	98901695	98795940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98799842_98800578_98800717_98801599_98801650_98808080_98808175_98811193_98811320_98811467_98811555_98812331_98812483_98817768_98817894_98819201_98819418_98820247_98820289_98822227_98822362_98822668_98822742_98825314_98825367_98849460_98849599_98881539_98881768_98901121
transcript_10127.known	chr1	+	2162	16	FSM	ENSG00000143374.18	ENST00000606933.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	73.0836963122875	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGCCAGGCGCAGTGGCT	150485463	True	NA	NA	False	AATAAA	-1	NA	150487419	150507284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150487517_150487857_150488055_150488963_150489088_150490600_150490726_150491393_150491512_150491597_150491663_150492410_150492490_150497529_150497748_150498501_150498665_150498896_150499035_150499215_150499294_150504334_150504436_150504631_150504734_150504905_150504979_150505590_150505706_150506915
transcript_101276.known	chr3	+	2837	11	FSM	ENSG00000064225.13	ENST00000469105.5	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14.3418966667592	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCTTGATTACTGACA	98732207	True	NA	10	True	AATAAA	-24	NA	98732265	98795254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98771120_98771191_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_101278.known	chr3	+	2109	11	FSM	ENSG00000064225.13	ENST00000394162.5	3571	11	10	1452	0	449	multi-exon	FALSE	canonical	2	3	junction_1	16.4243721341182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATGGCTTTGTATTAT	98732692	True	NA	NA	False	AGTAAA	-29	NA	98732713	98794393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_98733012_98756368_98756541_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_101282.known	chr3	+	1886	10	FSM	ENSG00000064225.13	ENST00000265261.11	3385	10	0	1499	0	418	multi-exon	FALSE	canonical	3	13	junction_1	12.838983845026	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAACTAAAGAAAGAATA	NA	False	NA	84	True	CATAAA	-18	NA	98732254	98794362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_98732533_98768429_98768530_98770878_98770957_98772812_98772917_98773919_98773984_98784944_98785041_98788035_98788223_98788325_98788464_98791840_98791994_98793674
transcript_1013.known	chr1	-	1976	3	FSM	ENSG00000235098.9	ENST00000427211.3	1976	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	-1421713	False	NA	2	True	AATAAA	-17	NA	1421769	1418419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1419550_1420796_1421006_1421132
transcript_101305.known	chr3	-	2670	3	FSM	ENSG00000239445.6	ENST00000661245.1	2670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCTTGCTGAGAATTAAAA	NA	False	NA	NA	False	NA	NA	NA	98732535	98713315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98715778_98718423_98718522_98732425
transcript_101308.nic	chr3	-	597	3	ISM	ENSG00000239445.6	ENST00000654439.1	4498	4	-278	4307	24	-287	5prime_fragment	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTACAGGTAGTATATTC	NA	False	NA	NA	False	AATAAA	-16	NA	98732733	98715591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_98715778_98718418_98718522_98732425
transcript_101309.known	chr3	-	1475	4	FSM	ENSG00000239445.6	ENST00000667022.1	1475	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTTGTCTTGCTGAGAAT	NA	False	NA	NA	False	NA	NA	NA	98732473	98713320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_98714499_98715375_98715522_98718418_98718522_98732425
transcript_101316.nnic	chr3	+	1108	2	NIC	ENSG00000144810.16	novel	841	5	NA	NA	-46	560	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATACTTTAAGAATGATTT	99638374	True	NA	NA	False	CATAAA	-18	NA	99638428	99704178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_99638665_99703306
transcript_101321.nnic	chr3	+	1264	11	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	canonical	2	34	junction_1	236.345932903446	2166	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTGAGCGGACCGTG	99804854	True	NA	13	True	AATAAA	-22	NA	99817820	100178603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_99818044_100010130_100010181_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_101326.known	chr3	+	4302	10	FSM	ENSG00000184220.12	ENST00000421999.8	4302	10	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_5	31.0769653888178	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGAAGTGAGTATGT	99804895	True	NA	5	True	ATTAAA	-23	NA	99817861	100181732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_99818044_100146972_100147062_100160429_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_101332.nnic	chr3	+	1215	10	NNC	ENSG00000184220.12	novel	4302	10	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	258.189326648221	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTTGAGCGGACCGTG	99804859	True	NA	13	True	AATAAA	-22	NA	99817825	100178603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_99818044_99994562_99994692_100160463_100160502_100162302_100162433_100166334_100166395_100167737_100167841_100171838_100171900_100172315_100172404_100176326_100176416_100178304
transcript_101350.known	chr3	+	397	4	FSM	ENSG00000184220.12	ENST00000463526.1	397	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.114206566143	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAAAAGAGAATA	99804870	True	NA	18	True	NA	NA	NA	99817836	100160455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_99818044_100051231_100051307_100146972_100147062_100160429
transcript_101352.known	chr3	+	3697	19	FSM	ENSG00000036054.13	ENST00000394144.9	3697	19	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_14	106.29543327821	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	100256098	True	NA	22	True	AATAAA	-19	NA	100260991	100325238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100311832_100311878_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_101354.known	chr3	+	3656	18	FSM	ENSG00000036054.13	ENST00000344949.9	3656	18	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_14	32.2754151351354	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCTCTCTTTCT	100256107	True	NA	35	True	AATAAA	-32	NA	100261000	100325251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100261072_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_101358.known	chr3	+	4054	18	FSM	ENSG00000036054.13	ENST00000486274.5	4054	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	86.3723331327564	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTCTTAAAGACACTG	100256170	True	NA	22	True	AATAAA	-19	NA	100261063	100325238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100261546_100279648_100279761_100281741_100281848_100283606_100283812_100290577_100290702_100295086_100295212_100295301_100295349_100296171_100296276_100297922_100298046_100299238_100299332_100302066_100302238_100304845_100304889_100306436_100306544_100310402_100310543_100316098_100316188_100319068_100319205_100320776_100320972_100323586
transcript_101366.known	chr3	+	7233	10	FSM	ENSG00000114021.12	ENST00000394140.9	7233	10	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	41.4124094242413	1535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTGAAAACAGTGCCTT	100331978	True	NA	NA	False	AGTAAA	-25	NA	100334756	100361635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100345679_100346180_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_101373.known	chr3	+	1469	9	FSM	ENSG00000114021.12	ENST00000465368.5	1469	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	40.2150469351958	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTAATTCGGCCT	100331960	True	NA	9	True	ATTAAA	-15	NA	100334738	100355351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100334799_100339086_100339206_100339814_100339936_100341072_100341162_100345584_100346256_100348802_100348882_100352403_100352503_100354771_100354828_100355176
transcript_101385.known	chr3	-	4100	12	FSM	ENSG00000154174.8	ENST00000284320.6	4100	12	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_8	28.4694994106713	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTTTAGGCTGGGCATG	-100395071	True	NA	24	True	AATAAA	-45	NA	100401089	100363430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_100365718_100368043_100368167_100369037_100369136_100372605_100372723_100373537_100373646_100375017_100375153_100377704_100377913_100381614_100381764_100384478_100384589_100386217_100386345_100386804_100386979_100400625
transcript_101386.known	chr3	+	1813	4	FSM	ENSG00000206535.8	ENST00000489752.1	1813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.09624744987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTCATTGGTATGACT	100401015	False	NA	0	True	CATAAA	-11	NA	100401610	100456301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100402440_100429696_100429886_100451679_100451950_100455776
transcript_101389.known	chr3	+	1864	4	FSM	ENSG00000206535.8	ENST00000383693.8	1864	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	0.471404520791032	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGAGTTTACTTTCTTA	100400943	True	NA	18	True	AATAAA	-15	NA	100401538	100456319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100402440_100429696_100429886_100451718_100451950_100455776
transcript_101395.nnic	chr3	+	1759	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	82	junction_2	64.2168634826987	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491926	True	NA	19	True	AATAAA	-25	NA	100492573	100577444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100519461_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_101397.nic	chr3	+	1665	7	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	82.9397371589759	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491949	True	NA	19	True	AATAAA	-25	NA	100492596	100577444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100519532_100519609_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_1014.known	chr1	-	2024	4	FSM	ENSG00000235098.9	ENST00000537107.6	2024	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.59966329107444	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTCTGAGAGGTTTT	-1421220	False	NA	2	True	AATAAA	-17	NA	1421276	1418419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1419550_1420051_1420593_1420796_1421006_1421132
transcript_101400.known	chr3	+	1567	6	FSM	ENSG00000181458.10	ENST00000323523.8	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	25.4982352330509	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491971	True	NA	19	True	AATAAA	-25	NA	100492618	100577444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100492929_100555208_100555402_100556759_100556973_100558404_100558590_100568821_100568968_100576924
transcript_101402.nnic	chr3	+	1168	4	NIC	ENSG00000181458.10	novel	1910	8	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	75.5439533575579	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491926	True	NA	19	True	AATAAA	-25	NA	100492573	100577444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100519461_100519609_100568821_100568968_100576924
transcript_101405.nnic	chr3	+	1028	3	NIC	ENSG00000181458.10	novel	1567	6	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	2	21	junction_1	86.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGAAATCTTTGTTTTT	100491919	True	NA	19	True	AATAAA	-25	NA	100492566	100577444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_100492929_100568821_100568968_100576924
transcript_101408.known	chr3	+	1753	8	FSM	ENSG00000114354.15	ENST00000418917.7	1753	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_6	293.599199242638	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709115	False	NA	12	True	AATAAA	-15	NA	100709352	100748964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100709432_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744837_100744932_100748148
transcript_101409.known	chr3	+	1793	8	FSM	ENSG00000114354.15	ENST00000676431.1	1793	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	292.412554519836	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709260	False	NA	12	True	AATAAA	-15	NA	100709462	100748964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100709589_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_101411.known	chr3	+	1783	8	FSM	ENSG00000114354.15	ENST00000476228.5	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_6	183.213937621502	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100706771	False	NA	12	True	AATAAA	-15	NA	100709605	100748964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100709722_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736705_100744832_100744932_100748148
transcript_101414.known	chr3	+	2005	8	FSM	ENSG00000114354.15	ENST00000487505.6	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	248.679204878043	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGTCTTGAAATTTTA	100709705	True	NA	12	True	AATAAA	-15	NA	100709969	100748964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_100710296_100713642_100713870_100719974_100720059_100728711_100728859_100732507_100732673_100736575_100736717_100744832_100744932_100748148
transcript_101416.known	chr3	-	4434	21	FSM	ENSG00000138468.16	ENST00000394091.5	4434	21	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_18	22.2132280409669	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTGTAATTTTTTTCC	-101512306	True	NA	NA	False	ATTAAA	-21	NA	101513184	101324272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101326081_101327665_101327817_101328477_101328547_101328645_101328690_101330333_101330387_101331984_101332110_101332769_101332863_101337508_101337632_101340094_101340212_101341645_101341780_101343685_101343955_101347871_101348052_101351617_101351652_101361714_101361862_101364833_101364992_101366429_101366770_101367829_101368012_101372007_101372127_101458954_101459053_101493872_101493969_101513090
transcript_101419.nic	chr3	-	836	6	ISM	ENSG00000138468.16	ENST00000314261.11	4736	23	27	47581	-2	-24528	5prime_fragment	FALSE	canonical	1	5	junction_2	27.6231786729913	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTATGTAGCGTAGTAC	NA	False	NA	NA	False	AATAAA	-14	NA	101513214	101371853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_101372127_101398860_101399056_101458954_101459053_101493872_101493969_101501069_101501120_101513090
transcript_101427.known	chr3	+	1017	2	FSM	ENSG00000174173.7	ENST00000495642.1	1017	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATAAGAGTATGCAGCC	101548489	False	NA	NA	False	NA	NA	NA	101562040	101565717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101562110_101564769
transcript_101429.known	chr3	+	1813	2	FSM	ENSG00000174173.7	ENST00000309922.7	1813	2	0	0	0	0	multi-exon	FALSE	canonical	3	691	junction_1	0	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGAGCCATTCAAGCA	101548316	True	NA	23	True	AGTAAA	-23	NA	101561867	101566446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101562004_101564769
transcript_101437.known	chr3	+	786	5	FSM	ENSG00000081154.12	ENST00000498274.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	1074.29569951666	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGGGTGGGTGTAAAG	101537391	True	NA	-43	True	ATTAAA	-18	NA	101574185	101592771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101579588_101580005_101585436_101585512_101590214_101590271_101592626
transcript_101446.known	chr3	+	2028	4	FSM	ENSG00000081154.12	ENST00000469941.5	2028	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	1195.04793023358	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTTTTATTTTCTATT	101537399	True	NA	15	True	AATAAA	-15	NA	101574193	101594437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101585436_101585512_101590214_101590271_101592626
transcript_101453.known	chr3	+	742	3	FSM	ENSG00000081154.12	ENST00000486406.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1247	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGGCATTTGTTTTGTTT	101537424	True	NA	21	True	AGTAAA	-27	NA	101574218	101593251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101590214_101590271_101592626
transcript_101465.known	chr3	-	459	1	FSM	ENSG00000242299.1	ENST00000496294.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27926	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	101576947	101576488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101576500_101576900
transcript_101466.known	chr3	+	2285	5	FSM	ENSG00000081154.12	ENST00000265260.8	2285	5	0	0	0	0	multi-exon	FALSE	canonical	3	2140	junction_1	199.924204387563	3278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTTACTGGTTTTTG	101537385	True	NA	43	True	AATAAA	-43	NA	101574179	101594465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101579789_101580005_101585436_101585512_101590214_101590271_101592626
transcript_101467.known	chr3	+	2165	5	FSM	ENSG00000081154.12	ENST00000460231.5	2165	5	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	874.80312070774	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAGTACCAATAAATTTG	101537395	True	NA	-15	True	NA	NA	NA	101574189	101594407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101574280_101579841_101580005_101585436_101585512_101590214_101590271_101592626
transcript_101469.known	chr3	-	2115	2	FSM	ENSG00000066422.6	ENST00000461821.1	2115	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTATGTCTTATTTTGT	-101638411	False	38707	NA	False	AATAAA	-18	NA	101677118	101670612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101672214_101676604
transcript_10147.known	chr1	+	566	2	FSM	ENSG00000228126.1	ENST00000416894.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGATATCACAAATTCAG	150515652	True	NA	NA	False	NA	NA	NA	150515756	150518032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150516063_150517772
transcript_10148.known	chr1	-	3950	3	FSM	ENSG00000143384.14	ENST00000369026.3	3950	3	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	27	1349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGGTGTGATATGGGTC	-150573993	True	NA	NA	False	AATAAA	-14	NA	150579610	150574557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150577492_150578243_150578492_150578842
transcript_101492.known	chr3	-	560	6	FSM	ENSG00000114391.13	ENST00000394077.8	560	6	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_5	1337.9815544319	116889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648011	True	NA	-12	True	AATAAA	-19	NA	101686718	101681090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_1015.known	chr1	-	876	2	FSM	ENSG00000235098.9	ENST00000442470.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAAGGAGTGTGAGGGC	-1421204	False	NA	NA	False	NA	NA	NA	1421260	1419137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1419550_1420796
transcript_101507.known	chr3	-	478	5	FSM	ENSG00000114391.13	ENST00000495401.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_1	3286.78676673739	1146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGGTTGTGCTGGATTT	-101647998	True	NA	-17	True	AATAAA	-14	NA	101686705	101681095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101681216_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_101508.known	chr3	-	799	5	FSM	ENSG00000114391.13	ENST00000469605.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	5038	junction_4	1493.51270081643	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGAAAGTTTCACAGT	-101647988	True	NA	NA	False	NA	NA	NA	101686695	101682041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101682493_101682770_101682908_101685817_101685929_101686481_101686558_101686671
transcript_101511.known	chr3	-	668	5	FSM	ENSG00000114391.13	ENST00000464595.1	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	7395	junction_1	521.029029901406	13201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGTGCTGGATTTTTTTT	-101648005	True	NA	-12	True	AATAAA	-19	NA	101686712	101681090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_101681216_101682428_101682493_101682770_101682908_101685817_101685929_101686481
transcript_101513.known	chr3	+	1704	3	FSM	ENSG00000244119.2	ENST00000667844.1	1704	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	101686747	True	NA	NA	False	NA	NA	NA	101686826	101700926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101687390_101692802_101692970_101699952
transcript_101514.known	chr3	+	7672	11	FSM	ENSG00000182504.11	ENST00000341893.8	7672	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.35163526410386	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCATCTGTTTATTTT	101723988	True	NA	15	True	AATAAA	-17	NA	101724613	101770562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101724720_101726593_101726737_101727382_101727542_101728835_101728938_101731839_101731954_101732487_101732655_101755429_101755595_101757062_101757197_101757633_101758424_101762484_101762561_101764846
transcript_10152.known	chr1	-	1110	2	FSM	ENSG00000143384.14	ENST00000307940.3	1110	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTTGAGAACAGGAAAG	-150579519	False	NA	NA	False	NA	NA	NA	150579530	150577069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150577492_150578842
transcript_101520.known	chr3	+	8568	8	FSM	ENSG00000144815.17	ENST00000273347.10	8568	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_6	22.2829668636135	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTTTTTTTCTTTTTCT	101777359	True	NA	NA	False	ATTAAA	-17	NA	101779210	101828231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_101526.nnic	chr3	+	1582	6	NNC	ENSG00000144815.17	novel	8568	8	NA	NA	3	4901	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	36.158539793526	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTGATGAAATAATAAAAAAT	101777353	True	NA	NA	False	AATAAA	-16	NA	101779204	101806201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101806084
transcript_101529.known	chr3	+	8074	8	FSM	ENSG00000144815.17	ENST00000491511.6	8074	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	33.7173122128254	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACCATTGCTTTATTTA	101779428	False	NA	14	True	AATAAA	-16	NA	101779441	101827392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_101779901_101782109_101782291_101782659_101782781_101785401_101785690_101801234_101801990_101807052_101807127_101816794_101817002_101821403
transcript_10153.known	chr1	+	1826	3	FSM	ENSG00000143382.16	ENST00000483335.1	1826	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTGTGTGTGCCTGAG	150548866	True	NA	NA	False	NA	NA	NA	150549420	150551906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150549500_150549821_150550277_150550614
transcript_101531.nic	chr3	+	1698	5	ISM	ENSG00000144815.17	ENST00000273347.10	8568	8	-6	26009	3	922	5prime_fragment	FALSE	canonical	3	88	junction_1	12.794041581924	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCTTTACCCTCAT	101777353	True	NA	NA	False	ATTAAA	-18	NA	101779204	101802222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_101779325_101782109_101782291_101782659_101782781_101785401_101785690_101801234
transcript_101538.known	chr3	+	4701	16	FSM	ENSG00000170017.12	ENST00000306107.9	4701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	29.3249988159515	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCCCACAGCTGTCT	105366668	True	NA	6	True	AATAAA	-18	NA	105366908	105576900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_105367482_105520066_105520168_105524288_105524509_105532001_105532067_105533602_105533691_105534662_105534846_105539974_105540103_105541632_105541766_105545222_105545336_105547148_105547285_105547389_105547524_105550126_105550260_105552143_105552183_105552467_105552586_105571851_105571965_105574476
transcript_101539.known	chr3	-	3669	20	FSM	ENSG00000114423.23	ENST00000646825.1	3669	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.4798520807365	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAACTAATGCAAAAAAAAAA	-105866186	True	NA	NA	False	NA	NA	NA	105869039	105658414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_105659230_105670232_105670353_105671023_105671047_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868911
transcript_101540.known	chr3	-	6749	19	FSM	ENSG00000114423.23	ENST00000394030.8	6749	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	19.0237830356545	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAGTTGGTACTTTATT	-105866159	True	NA	NA	False	TATAAA	-17	NA	105869012	105655460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_105659230_105670232_105670353_105678430_105678572_105681478_105681611_105681723_105681819_105685319_105685467_105693493_105693589_105702093_105702460_105703987_105704174_105720046_105720251_105734008_105734141_105737170_105737259_105740493_105740632_105745916_105746039_105751461_105751619_105776395_105776543_105853413_105853665_105867409_105867592_105868735
transcript_10155.known	chr1	-	725	5	FSM	ENSG00000143420.19	ENST00000361631.9	725	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	334.023951237033	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGAATTAGGGCTTGGA	-150628996	False	38469	NA	False	NA	NA	NA	150629128	150622543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150622860_150625641_150625809_150626478_150626527_150627466_150627593_150629060
transcript_101555.nnic	chr3	-	977	4	NNC	ENSG00000242759.8	novel	966	8	NA	NA	207155	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.16024689946929	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	-106914133	True	NA	NA	False	NA	NA	NA	106914153	106842906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106843068_106843178_106843257_106913024_106913170_106913560
transcript_101556.nnic	chr3	-	471	4	NNC	ENSG00000242759.8	novel	966	8	NA	NA	207644	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.16024689946929	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	-106913650	False	NA	NA	False	NA	NA	NA	106913664	106842906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106843068_106843178_106843257_106913041_106913170_106913560
transcript_101558.known	chr3	-	999	3	FSM	ENSG00000242759.8	ENST00000657720.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTAGTTTTATTTATA	NA	False	NA	NA	False	AATAAA	-34	NA	107240671	107111481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_107112147_107129887_107129993_107240442
transcript_101560.nic	chr3	-	723	3	ISM	ENSG00000242759.8	ENST00000657806.1	1049	9	327100	0	207800	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	-106913494	False	NA	NA	False	NA	NA	NA	106913508	106842906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_106843068_106843178_106843257_106913024
transcript_101561.nic	chr3	-	794	3	ISM	ENSG00000242759.8	ENST00000655451.1	981	9	327012	13	207712	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	-106913582	False	NA	NA	False	NA	NA	NA	106913596	106842906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_106843068_106843178_106843257_106913041
transcript_101562.nnic	chr3	-	613	3	NNC	ENSG00000242759.8	novel	950	8	NA	NA	207716	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAGCATAAGAAGGCAAAA	-106913578	False	NA	NA	False	NA	NA	NA	106913592	106842906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_106843068_106843178_106843257_106913218
transcript_101564.known	chr3	+	5519	2	FSM	ENSG00000243701.8	ENST00000660597.1	5519	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGATCCGCCCGCCTG	107240474	True	NA	NA	False	NA	NA	NA	107240663	107251102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107241088_107246007
transcript_101568.known	chr3	+	9009	18	FSM	ENSG00000114439.19	ENST00000325805.13	9009	18	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_13	13.3411453469914	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTGTCCCCCTAAACTG	107518864	True	NA	22	True	AATAAA	-34	NA	107522961	107811339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107789786_107789877_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_101569.known	chr3	+	8930	17	FSM	ENSG00000114439.19	ENST00000415149.6	8930	17	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_10	8.00561326507845	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGAACATCGAATGATG	NA	False	NA	7	True	AATAAA	-19	NA	107522935	107811324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107791239_107791300_107798522_107798721_107801094_107801282_107805369
transcript_101572.nic	chr3	+	1416	11	ISM	ENSG00000114439.19	ENST00000415149.6	8930	17	-25	38539	-25	0	5prime_fragment	FALSE	canonical	2	36	junction_10	7.82879301041993	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGAAAAATCGGCTAAGG	NA	False	NA	81	True	ATTAAA	-42	NA	107522910	107772785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_101573.nic	chr3	+	1697	11	ISM	ENSG00000114439.19	ENST00000415149.6	8930	17	-25	38258	-25	0	5prime_fragment	FALSE	canonical	2	36	junction_10	7.82879301041993	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	NA	False	NA	7	True	ATTAAA	-12	NA	107522910	107773066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_107523108_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_101580.known	chr3	+	3980	17	FSM	ENSG00000114439.19	ENST00000402543.5	3980	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	21.2028889541025	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAGACAAAAATAT	107518863	True	NA	NA	False	NA	NA	NA	107522960	107806342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107523108_107526326_107526399_107645835_107645910_107661827_107661945_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627_107773637_107774718_107774858_107778370_107778520_107798522_107798721_107801094_107801282_107805369
transcript_101581.known	chr3	+	1586	11	FSM	ENSG00000114439.19	ENST00000402163.6	1586	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5274071100092	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCTAAAAAAGAAAAAGAAG	107525300	True	NA	7	True	ATTAAA	-12	NA	107525401	107773066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107525488_107526326_107526399_107645835_107645910_107710451_107710623_107716606_107716850_107728764_107728961_107732955_107733024_107744629_107744711_107747964_107748040_107755597_107755679_107772627
transcript_101582.known	chr3	+	694	2	FSM	ENSG00000240423.3	ENST00000661824.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGGGATAACGTGGCTA	NA	False	NA	NA	False	AATAAA	-14	NA	107927721	107928527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_107927761_107927872
transcript_101588.known	chr3	-	5292	11	FSM	ENSG00000196776.17	ENST00000361309.6	5292	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_3	27.3685951411467	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088336	True	NA	NA	False	ATTAAA	-19	NA	108091031	108043090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108047293_108049618_108049652_108050577_108050603_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_101600.known	chr3	-	5228	9	FSM	ENSG00000196776.17	ENST00000355354.13	5228	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	45.766902615318	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTCATAATTATTTTT	-108088330	True	NA	NA	False	ATTAAA	-19	NA	108091025	108043090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108047293_108051938_108051971_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_101605.nnic	chr3	-	1177	8	NIC	ENSG00000196776.17	novel	5228	9	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	52.8849347785417	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTGCCCAATTGAGA	-108088299	True	NA	-23	True	AATAAA	-15	NA	108090994	108047078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_108047293_108057476_108057570_108058336_108058430_108059451_108059545_108060744_108060853_108071092_108071183_108079990_108080345_108090862
transcript_101609.known	chr3	-	3057	11	FSM	ENSG00000114446.5	ENST00000264538.4	3057	11	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	30.2927384037825	817	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTATTTTCTTCCATC	-108216778	True	NA	NA	False	AATAAA	-16	NA	108222424	108160811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108162656_108163662_108163730_108165430_108165494_108166853_108166986_108167792_108167865_108191520_108191644_108206627_108206697_108213930_108214022_108218534_108218654_108219409_108219573_108222110
transcript_101613.known	chr3	-	4066	21	FSM	ENSG00000163507.15	ENST00000295746.13	4066	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_7	10.3898989407982	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAAAACGTTAAAGAAA	-108587624	True	NA	NA	False	AATAAA	-19	NA	108589438	108549863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_108551320_108552233_108552374_108553647_108553731_108554375_108554490_108557217_108557415_108559756_108559868_108559953_108560029_108560648_108560842_108563125_108563245_108565354_108565455_108566496_108566639_108568154_108568315_108569388_108569608_108576270_108576347_108579280_108579427_108579565_108579689_108581414_108581512_108582107_108582203_108582976_108583084_108585064_108585213_108589273
transcript_101614.known	chr3	+	5304	33	FSM	ENSG00000198919.13	ENST00000361582.8	5304	33	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	25.2475246311396	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTATTTTATCTGTGTAT	108587509	True	NA	4	True	AATAAA	-16	NA	108589721	108694840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648113_108648917_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108686444_108686585_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_101621.nic	chr3	+	2357	16	ISM	ENSG00000198919.13	ENST00000361582.8	5304	33	-205	46728	-188	0	5prime_fragment	FALSE	canonical	3	112	junction_1	20.0860371623894	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	108589370	True	NA	NA	False	NA	NA	NA	108589516	108648112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_101622.known	chr3	+	2076	16	FSM	ENSG00000198919.13	ENST00000479138.5	2076	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	39.6751251485809	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAGCTCTCATTAATAT	108590025	False	NA	NA	False	NA	NA	NA	108590054	108648112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108590097_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634973_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942
transcript_101625.nic	chr3	+	837	6	ISM	ENSG00000198919.13	ENST00000495008.5	5164	31	-188	69522	-188	-4601	5prime_fragment	FALSE	canonical	3	112	junction_1	24.0199916736039	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAAGAAAGAGGTATGT	108589370	True	NA	24	True	NA	NA	NA	108589516	108624510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443
transcript_101626.known	chr3	+	5164	31	FSM	ENSG00000198919.13	ENST00000495008.5	5164	31	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_26	47.5607214224324	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTTGTGAGATAAATGTTC	108587492	True	NA	-83	True	ATTAAA	-14	NA	108589704	108694032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_108589840_108605334_108605439_108608088_108608159_108611173_108611330_108616540_108616658_108624443_108624525_108625844_108625970_108629061_108629177_108632952_108633073_108634870_108634959_108636615_108636709_108637495_108637549_108642437_108642515_108644163_108644782_108646616_108646650_108647942_108648963_108651136_108651163_108654144_108654311_108661876_108661973_108662129_108662258_108669680_108669750_108672559_108672657_108674077_108674182_108675785_108675874_108677496_108677599_108684215_108684342_108687975_108688097_108688592_108688737_108688822_108688925_108690786_108690904_108693359
transcript_101638.nnic	chr3	-	1440	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	1487	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_8	29.757352032733	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109315007	False	NA	-4	True	AATAAA	-22	NA	109315030	109293787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109314739
transcript_101640.nnic	chr3	-	1453	9	NNC	ENSG00000163530.4	novel	1383	9	NA	NA	-123	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_8	24.3307290273021	141	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	NA	False	NA	-4	True	AATAAA	-22	NA	109316640	109293787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316336
transcript_10165.known	chr1	-	792	4	FSM	ENSG00000143420.19	ENST00000361532.9	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	376.759280649536	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGAAAAGGGGTTCTAGTT	-150629008	False	NA	NA	False	NA	NA	NA	150629140	150622440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150622860_150625641_150625809_150627466_150627593_150629060
transcript_101651.known	chr3	-	1383	9	FSM	ENSG00000163530.4	ENST00000478945.1	1383	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	20.2530861845794	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCAGTGTGTGTTAAA	-109316494	False	NA	-4	True	AATAAA	-22	NA	109316517	109293787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109294005_109300370_109300436_109304474_109304671_109308031_109308294_109309025_109309080_109309169_109309331_109312544_109312693_109314509_109314556_109316283
transcript_101692.known	chr3	-	2817	7	FSM	ENSG00000121570.13	ENST00000335658.7	2788	7	-26	-3	-26	3	multi-exon	FALSE	canonical	3	3947	junction_6	704.701453729797	3733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACAGTTTATTTACTC	-109266364	True	NA	-2	True	AATAAA	-21	NA	109337572	109326140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109328025_109328889_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_101693.known	chr3	-	1087	6	FSM	ENSG00000121570.13	ENST00000463966.5	1087	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_2	1973.94107308197	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTGTATTTTTAGTA	-109266314	True	NA	NA	False	NA	NA	NA	109337522	109327524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109328025_109328889_109329082_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_101694.known	chr3	-	1225	5	FSM	ENSG00000121570.13	ENST00000478791.1	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_4	407.581510252857	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTGGGGACCACAGTTT	-109266307	True	NA	NA	False	NA	NA	NA	109337515	109329975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109330813_109331733_109331785_109331870_109332032_109333869_109333994_109337463
transcript_101695.known	chr3	-	805	6	FSM	ENSG00000121570.13	ENST00000495679.5	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_5	1727.19367761696	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTACCTGATGCTTTTC	-109266309	True	NA	NA	False	NA	NA	NA	109337517	109328889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109329089_109330523_109330813_109331733_109331785_109331870_109332032_109333869_109333921_109337463
transcript_101696.known	chr3	-	680	2	FSM	ENSG00000121570.13	ENST00000489281.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTACAGGCTGGTTTT	-109266337	True	NA	NA	False	AGTAAA	-13	NA	109337545	109333395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_109333994_109337463
transcript_1017.known	chr1	+	506	2	FSM	ENSG00000215915.10	ENST00000484537.2	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACGGGGCGGGGTTTGGG	NA	False	NA	NA	False	AATAAA	-36	NA	1462482	1468663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1462709_1468383
transcript_101720.nnic	chr3	+	835	3	NNC	ENSG00000289358.1	novel	913	3	NA	NA	-4	-2	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	7	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGGTCGTCATTTATTTC	109336594	True	NA	12	True	NA	NA	NA	109337735	109382928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_109337981_109343506_109343651_109382482
transcript_101727.nnic	chr3	+	907	3	FSM	ENSG00000289358.1	ENST00000687523.1	913	3	-1	7	-1	-7	multi-exon	FALSE	canonical	1	2	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGATTGGTCGTCATTT	109336597	True	NA	7	True	NA	NA	NA	109337738	109382923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_109337981_109352998_109353223_109382482
transcript_101729.nnic	chr3	+	684	2	NIC	ENSG00000289358.1	novel	913	3	NA	NA	0	-5	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGGTCGTCATTTAT	109336598	True	NA	9	True	NA	NA	NA	109337739	109382925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_109337981_109382482
transcript_101733.known	chr3	-	1415	4	FSM	ENSG00000242242.7	ENST00000474769.6	1415	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.4835978296108	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTGGAATTACTTC	-111071501	False	NA	1	True	AGTAAA	-34	NA	111071524	110892122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_110892604_110893137_110893831_111069263_111069472_111071491
transcript_101734.nnic	chr3	-	1628	3	NIC	ENSG00000242242.7	novel	1415	4	NA	NA	-76496	0	combination_of_known_splicesites	FALSE	canonical	3	83	junction_2	2.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGAACTTTTACTC	-110966080	True	NA	-16	True	AGTAAA	-17	NA	110969972	110892139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_110892604_110893137_110893831_110969501
transcript_101735.nnic	chr3	-	1453	3	NNC	ENSG00000242242.7	novel	1415	4	NA	NA	-77916	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	43	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTTTGAACTTTTACTC	-110971161	True	NA	-16	True	AGTAAA	-17	NA	110971392	110892139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_110892604_110893137_110893831_110971096
transcript_101739.known	chr3	-	792	3	FSM	ENSG00000242242.7	ENST00000491709.5	792	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGAGGTAGACTGTATT	-111071530	True	NA	-68	True	NA	NA	NA	111071553	111045387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_111045910_111069263_111069472_111071491
transcript_101740.known	chr3	+	5197	6	FSM	ENSG00000177707.11	ENST00000485303.6	5197	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	13.8506317545446	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGTAATAAGTTCAT	111069031	True	NA	NA	False	AATAAA	-25	NA	111071815	111137560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111072178_111112029_111112372_111118655_111118953_111122120_111122239_111126183_111126336_111133634
transcript_101742.nnic	chr3	+	811	3	NNC	ENSG00000153283.13	novel	500	2	NA	NA	-5858	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTATTGGTCAGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	111561722	111579459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_111561976_111567522_111567648_111579026
transcript_101744.nnic	chr3	+	645	2	NNC	ENSG00000144824.21	novel	1861	2	NA	NA	-105	-15960	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTGGATCTTTTT	111859550	False	NA	NA	False	ATTAAA	-21	NA	111859644	111869835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_111859879_111869424
transcript_101745.known	chr3	+	1861	2	FSM	ENSG00000144824.21	ENST00000478922.1	1861	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAAGTAGTCAGTGAAAT	111855338	True	NA	NA	False	ATTAAA	-19	NA	111859749	111885795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111859879_111884063
transcript_101748.known	chr3	+	801	6	FSM	ENSG00000144827.9	ENST00000494817.1	801	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	115.976894250536	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGATGACATTGTACCTT	111975523	True	NA	NA	False	NA	NA	NA	111979052	111991540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111990699_111990752_111991376
transcript_101752.known	chr3	+	2604	5	FSM	ENSG00000144827.9	ENST00000273359.8	2604	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	15.2704780540755	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAGTCTTATGAGTCTT	111975496	True	NA	21	True	AATAAA	-24	NA	111979025	111993368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111981783_111981968_111986263_111986376_111986913_111987052_111991376
transcript_101757.known	chr3	+	1339	4	FSM	ENSG00000144827.9	ENST00000491580.1	1339	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	107.079409785448	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTTAAAATTGAGCTTT	111975480	True	NA	NA	False	TATAAA	-15	NA	111979009	111992271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111986263_111986376_111986913_111987052_111991376
transcript_101759.known	chr3	+	890	3	FSM	ENSG00000144827.9	ENST00000493784.1	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	104	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTTTCTTATGCTTA	111975522	True	NA	NA	False	ATTAAA	-28	NA	111979051	111991976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111979204_111986913_111987052_111991376
transcript_101763.known	chr3	+	1129	5	FSM	ENSG00000144834.14	ENST00000478951.6	1129	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.03108891324554	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTGTAAAGTTCATTC	111998879	False	NA	6	True	AATAAA	-18	NA	111998921	112013885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111999115_111999420_111999603_112000771_112000947_112011762_112011866_112013409
transcript_101764.known	chr3	+	1488	5	FSM	ENSG00000144834.14	ENST00000393917.6	1488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.35607132140714	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTGTAAAGTTCATTCTT	NA	False	NA	8	True	AATAAA	-20	NA	111998738	112013887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_111999115_111999246_111999603_112000771_112000947_112011762_112011866_112013409
transcript_101768.known	chr3	+	2237	6	FSM	ENSG00000114529.13	ENST00000264848.10	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	8.21218606705912	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCATTCCCATTGGC	112085015	True	NA	29	True	AATACA	-17	NA	112086388	112118210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112109542_112109614_112112963_112113146_112116641
transcript_10177.known	chr1	-	1369	3	FSM	ENSG00000143420.19	ENST00000513281.5	1369	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	451	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGAACCTTATAGATATC	-150628984	False	38469	NA	False	AGTAAA	-29	NA	150629116	150624621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150625809_150627466_150627593_150629060
transcript_101773.known	chr3	+	965	4	FSM	ENSG00000114529.13	ENST00000484828.1	965	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	36.1601376595216	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAAGGCACTTTAGAAGA	112085063	True	NA	NA	False	NA	NA	NA	112086436	112117239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112086546_112093359_112093490_112102837_112102966_112116641
transcript_101781.known	chr3	+	1524	7	FSM	ENSG00000091972.18	ENST00000473539.5	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	129.364364833941	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTACTGCTTTGCTAA	112328560	True	NA	NA	False	NA	NA	NA	112333155	112362132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112335942_112336018_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_101799.known	chr3	+	1097	5	FSM	ENSG00000239482.6	ENST00000498032.5	1097	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.35607132140714	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATTGGTTAAATTCAGC	112302463	False	NA	NA	False	AATAAA	-31	NA	112302477	112332791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112302715_112326521_112326651_112327610_112327695_112329345_112329387_112332185
transcript_101807.known	chr3	+	2017	5	FSM	ENSG00000091972.18	ENST00000478595.1	2017	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	117.067021402272	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATTTGGCTTATGATAT	112328582	True	NA	17	True	ATTAAA	-13	NA	112333177	112362809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112344961_112345289_112347562_112347831_112349711_112349820_112361542
transcript_101818.known	chr3	+	2129	6	FSM	ENSG00000091972.18	ENST00000315711.12	2129	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	81.6465553468118	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGCTTATGATATTCT	112328560	True	NA	20	True	ATTAAA	-16	NA	112333155	112362812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112333225_112340901_112340984_112344961_112345289_112347557_112347831_112349711_112349820_112361542
transcript_101819.nnic	chr3	-	560	4	Intergenic	novelGene_42	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTGTGTGACCTGATTT	-112404412	True	NA	NA	False	AATAAA	-21	NA	112404422	112375840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_112376101_112380402_112380602_112381905_112381937_112404352
transcript_101820.nnic	chr3	-	740	4	Intergenic	novelGene_43	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGTGTGTGACCTGATTT	-112422974	False	NA	NA	False	AATAAA	-21	NA	112423015	112375840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_112376101_112380402_112380602_112381905_112381937_112422765
transcript_10183.known	chr1	-	703	2	FSM	ENSG00000143420.19	ENST00000362052.7	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	1324	junction_1	0	1697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGAATCAGTTTCTTCA	-150591108	True	NA	-21	True	AATAAA	-11	NA	150629577	150627053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150627593_150629413
transcript_101832.nic	chr3	-	1210	12	NIC	ENSG00000144848.11	novel	1568	12	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_11	193.849221461313	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112561937	False	56	-3	True	AATAAA	-17	NA	112561993	112532509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561845
transcript_10184.known	chr1	-	2818	3	FSM	ENSG00000143420.19	ENST00000271690.12	2818	3	0	0	0	0	multi-exon	FALSE	canonical	3	1135	junction_1	94.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGTGGTCTGGTTC	-150591108	True	NA	-2	True	ATTAAA	-28	NA	150629577	150623280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150625809_150627466_150627593_150629413
transcript_101841.known	chr3	+	2444	8	FSM	ENSG00000138459.9	ENST00000261034.6	2444	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	86.6119659923571	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTGTTGCCACTCTG	112558442	True	NA	3	True	ATTAAA	-17	NA	112562071	112584156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112580707_112581178_112581327_112582670
transcript_101845.known	chr3	+	4366	7	FSM	ENSG00000138459.9	ENST00000492406.6	4366	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	30.8526966226437	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCGAAGTTCTGATATGT	112558415	True	NA	NA	False	AATAAA	-19	NA	112562044	112585579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112562274_112563384_112563534_112569170_112569270_112570539_112570671_112573888_112573957_112580545_112581327_112582670
transcript_10185.known	chr1	-	2546	3	FSM	ENSG00000143420.19	ENST00000356527.9	2546	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	661.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTTCTTCATCTCCGA	-150591108	True	NA	-27	True	TATAAA	-17	NA	150629577	150623621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150625809_150627397_150627593_150629413
transcript_101859.known	chr3	-	1568	12	FSM	ENSG00000144848.11	ENST00000283290.10	1568	12	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_9	49.4373298912558	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTTGTGTCTTATTA	-112554233	True	NA	-3	True	AATAAA	-17	NA	112561962	112532509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_112532781_112534268_112534338_112536474_112536603_112537734_112537891_112538145_112538181_112541802_112541885_112544056_112544107_112548532_112548641_112550191_112550263_112553279_112553330_112558375_112558418_112561456
transcript_101868.known	chr3	-	1382	8	FSM	ENSG00000163608.15	ENST00000462295.5	1382	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	38.5243098442995	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAGAACTGCTAAGATCT	-113016124	True	NA	NA	False	NA	NA	NA	113019666	113005480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011166_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_101869.known	chr3	-	2056	8	FSM	ENSG00000163608.15	ENST00000473284.5	2056	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	25.392430175233	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACTGAATAATTTTATG	NA	False	NA	NA	False	NA	NA	NA	113019861	113005242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113012812_113013271_113013404_113013952_113014033_113019541
transcript_101877.known	chr3	-	1576	6	FSM	ENSG00000163608.15	ENST00000489848.5	1576	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	47.6126033734767	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGTTAATATGAAAAATCT	-113016128	True	NA	NA	False	NA	NA	NA	113019670	113005321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113013952_113014033_113019541
transcript_101878.known	chr3	+	1787	5	FSM	ENSG00000163607.18	ENST00000383677.7	1787	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	49.2817156763033	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGCTGGATAACAAATTA	112988761	True	NA	-31	True	ATTAAA	-13	NA	112990984	113001935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_10188.known	chr1	-	973	6	FSM	ENSG00000143457.11	ENST00000427665.1	973	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.4289998452	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGCAATGAATCGAGCC	-150691925	True	NA	NA	False	NA	NA	NA	150697144	150648436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694107_150694174_150694655_150694851_150696991
transcript_101884.known	chr3	+	679	4	FSM	ENSG00000163607.18	ENST00000295864.9	679	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	58.3399996190912	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTATGCTAACTGGAGTT	112988763	True	NA	NA	False	NA	NA	NA	112990986	113000960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112996891_112996992_112999445_112999565_113000849
transcript_101887.known	chr3	-	1512	4	FSM	ENSG00000163608.15	ENST00000469809.5	1512	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.3594315963113	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTCATATTAAAGTGAG	-113016116	True	NA	-49	True	NA	NA	NA	113019658	113004953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113013948_113014033_113019541
transcript_101888.known	chr3	-	1212	3	FSM	ENSG00000163608.15	ENST00000472705.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	66.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAATGAGGAGCGGGGG	-113016122	True	NA	NA	False	NA	NA	NA	113019664	113005175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113019541
transcript_101891.known	chr3	-	707	1	FSM	ENSG00000272844.1	ENST00000609673.1	707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTTGCACAGATGTTAC	-112991108	False	NA	NA	False	ATTAAA	-23	NA	112991153	112990446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_112990400_112991200
transcript_101892.known	chr3	+	1921	6	FSM	ENSG00000163607.18	ENST00000383678.8	1921	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	15.9423963067037	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGGCTTTTCTTTAGA	112988760	True	NA	3	True	ATTAAA	-13	NA	112990983	113001969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112993025_112993125_112995134_112995266_112996891_112996992_112999445_112999565_113000849
transcript_101893.known	chr3	+	715	5	FSM	ENSG00000163607.18	ENST00000488781.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	46.9434500223407	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTCCCGGTTTAGCTGAA	112988785	True	NA	NA	False	NA	NA	NA	112991008	113000919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_112991336_112993025_112993125_112996891_112996992_112999445_112999565_113000849
transcript_101894.known	chr3	-	2842	8	FSM	ENSG00000163608.15	ENST00000486271.5	2842	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_6	18.9047019310552	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTAATTTTATTTATTT	-113016164	True	NA	-12	True	ATTAAA	-23	NA	113019706	113004916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113006005_113008170_113008431_113010642_113010705_113011044_113011407_113012733_113013404_113013952_113014033_113017447_113017603_113019541
transcript_101896.known	chr3	+	582	4	FSM	ENSG00000144857.15	ENST00000464546.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.94422221866655	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCCACGGGACCCTCG	NA	False	NA	NA	False	NA	NA	NA	113211002	113250711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113211158_113216186_113216279_113249721_113249900_113250554
transcript_101898.known	chr3	-	5417	18	FSM	ENSG00000163611.11	ENST00000295872.8	5417	18	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_17	20.300510502044	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTTGCCAATTTTAT	-113513820	True	NA	NA	False	AATAAA	-21	NA	113515156	113442717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113445361_113446588_113446677_113448037_113448141_113450335_113450517_113453465_113453951_113457135_113457358_113460616_113460765_113465652_113465785_113468138_113468405_113468761_113468900_113469098_113469239_113488944_113489064_113493205_113493313_113494048_113494143_113499438_113499583_113503179_113503228_113506506_113506606_113514896
transcript_1019.known	chr1	+	4314	14	FSM	ENSG00000160072.20	ENST00000472194.6	4314	14	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_11	122.788219082948	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAACTGTTTAAAAAAAAAAA	1478010	False	NA	NA	False	NA	NA	NA	1478025	1497848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1478746_1479048_1479109_1480866_1480937_1482137_1482304_1482544_1482615_1485015_1485172_1485781_1485839_1486109_1486236_1486543_1486669_1487862_1487915_1489203_1489275_1490256_1490425_1490562_1490672_1495484
transcript_101907.known	chr3	-	958	5	FSM	ENSG00000121579.14	ENST00000481432.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_3	623.695588809156	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAATCATGTTTGA	-113716388	True	NA	-33	True	NA	NA	NA	113746249	113721589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723980_113724096_113745941
transcript_101908.known	chr3	-	962	5	FSM	ENSG00000121579.14	ENST00000493900.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_4	511.14723906131	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGTTCTTGTTTTTCTT	-113746282	False	NA	14	True	TTTAAA	-12	NA	113746300	113721655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113721938_113722905_113722973_113723421_113723542_113723958_113724093_113745941
transcript_101909.known	chr3	+	4575	15	FSM	ENSG00000114573.10	ENST00000273398.8	4575	15	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_12	22.1147286777341	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTTTTTTCTTTTTCTCTT	113741575	True	NA	11	True	AATAAA	-18	NA	113747034	113812056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113747114_113778740_113778836_113781049_113781179_113784223_113784439_113784695_113784834_113786231_113786384_113788712_113788876_113789731_113789841_113794871_113794995_113795089_113795205_113795875_113795940_113798242_113798447_113803582_113803678_113805353_113805526_113809334
transcript_101917.known	chr3	+	3807	18	FSM	ENSG00000178075.20	ENST00000358160.9	3807	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	5.70800445680386	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTAGTTTTTCTTCTTTT	113838516	True	NA	12	True	AATAAA	-16	NA	113838787	113947174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751_113882833_113901030_113901147_113904139_113904273_113908957_113909121_113915700_113915839_113930713_113930833_113933510_113933654_113934431_113934536_113936265_113936443_113938085_113938144_113939885_113939997_113940239_113940346_113945397
transcript_101919.nic	chr3	+	1288	6	ISM	ENSG00000178075.20	ENST00000358160.9	3807	18	81	63635	-5	7672	5prime_fragment	FALSE	canonical	2	13	junction_5	7.91454357496375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCATGATCCATCTATC	113838597	True	NA	NA	False	NA	NA	NA	113838868	113883539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_113838937_113844502_113844650_113869506_113869592_113875483_113875588_113876164_113876261_113882751
transcript_10192.known	chr1	-	3124	5	FSM	ENSG00000143457.11	ENST00000271732.8	3124	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	17.1682847133894	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCTCTCTGTGCACAA	-150691935	True	NA	-7	True	AATAAA	-17	NA	150697154	150646229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150648749_150661813_150661929_150663631_150663764_150694655_150694851_150696991
transcript_101920.nic	chr3	+	677	3	NIC	ENSG00000178075.20	novel	290	2	NA	NA	-5	319	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAATTCCTGTGAGAGTT	113838597	True	NA	NA	False	ATTAAA	-17	NA	113838868	113845284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_113838937_113844502_113844650_113844822
transcript_101922.known	chr3	+	4023	10	FSM	ENSG00000151576.10	ENST00000281273.8	4023	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	64.4132108219662	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTAGAGATTTCTCATT	114051666	True	NA	88	True	ATTAAA	-19	NA	114056736	114088422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_114056865_114056998_114057107_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_101925.known	chr3	+	3844	9	FSM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	62.7184930861704	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACTGTGTTTGGCTTTCT	114051664	True	NA	15	True	AATAAA	-20	NA	114056734	114088349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_101933.nic	chr3	+	985	6	ISM	ENSG00000151576.10	ENST00000485050.5	3844	9	0	11319	0	186	5prime_fragment	TRUE	canonical	3	113	junction_1	30.3156725143943	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCATGCCTTTGATGTTTTG	114051664	True	NA	NA	False	ATTAAA	-16	NA	114056734	114077030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_114056865_114065236_114065458_114066227_114066284_114067986_114068064_114070625_114070839_114076742
transcript_101934.known	chr3	+	1046	6	FSM	ENSG00000151576.10	ENST00000493014.1	1046	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	86.2122961067619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAACATGGGAAGACGTG	114051711	True	NA	NA	False	AATACA	-34	NA	114056781	114085952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_114056865_114070625_114070839_114076742_114076943_114079905_114080058_114082676_114082795_114085672
transcript_101935.known	chr3	-	3889	17	FSM	ENSG00000163617.11	ENST00000295878.8	3889	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.83945417290014	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTGTTACTGTCTCAT	-114056334	True	NA	0	True	AATAAA	-23	NA	114056526	113964136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_113965360_113978185_113978332_113978857_113979011_113980649_113980794_114001594_114001697_114002455_114002539_114004636_114004747_114005507_114005963_114010771_114011022_114018677_114018869_114031625_114031780_114034924_114035149_114036607_114036787_114042702_114042847_114046590_114046733_114053596_114053636_114056376
transcript_101938.known	chr3	-	591	4	FSM	ENSG00000163617.11	ENST00000483766.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAAAGGAAGGCTCT	-114056347	True	NA	NA	False	NA	NA	NA	114056539	114035043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_114035149_114036607_114036787_114042702_114042847_114056376
transcript_101942.nnic	chr3	-	392	3	NNC	ENSG00000181722.17	novel	27503	12	NA	NA	0	-169287	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTCTTGAAAGTTAC	-115147032	True	NA	NA	False	AATAAA	-23	NA	115147288	115143678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_115143906_115144812_115144908_115147218
transcript_101943.nnic	chr3	-	504	2	NNC	ENSG00000181722.17	novel	27503	12	NA	NA	-9	-172053	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	47	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGTCTCTCGTACACTGT	-115147041	True	NA	18	True	TATAAA	-35	NA	115147297	115146444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_115146870_115147218
transcript_101953.nnic	chr3	+	1177	2	NNC	ENSG00000242880.2	novel	1118	7	NA	NA	78125	331	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	115317973	False	NA	NA	False	ATTAAA	-21	NA	115318003	115370731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_115318508_115370058
transcript_101961.known	chr3	+	1498	3	FSM	ENSG00000172020.13	ENST00000305124.11	1498	3	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_2	11.5	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAATGGCTCTGTGTTT	115621890	False	NA	13	True	AATAAA	-17	NA	115623509	115721483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_115623720_115676012_115676611_115720793
transcript_101962.nnic	chr3	+	540	4	NNC	ENSG00000240922.1	novel	553	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.85861230093008	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTATTTTTAGTAT	116359854	True	NA	NA	False	ATTAAA	-23	NA	116359997	116370090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_116360094_116367941_116368036_116368142_116368233_116369830
transcript_101963.known	chr3	+	553	4	FSM	ENSG00000240922.1	ENST00000490351.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.05480466765633	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTATTTTTAGTAT	116359880	False	NA	NA	False	ATTAAA	-23	NA	116360023	116370090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_116360094_116367941_116368036_116368142_116368272_116369830
transcript_101965.nnic	chr3	+	489	3	NIC	ENSG00000240922.1	novel	553	4	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTATTTTTAGTAT	116359850	True	NA	NA	False	ATTAAA	-23	NA	116359993	116370090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_116360094_116368142_116368272_116369830
transcript_101969.known	chr3	+	2028	8	FSM	ENSG00000114638.8	ENST00000264234.8	2028	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.63887656499994	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTTTCATTTTTACCAA	119173569	True	NA	NA	False	AGTAAA	-18	NA	119173597	119205143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119173639_119186713_119186811_119187774_119187976_119190244_119190320_119190981_119191105_119194218_119194399_119199056_119199141_119203916
transcript_101979.known	chr3	-	2385	9	FSM	ENSG00000121578.13	ENST00000359213.7	2385	9	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	54.2584958785258	1023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237982	True	NA	-4	True	AATAAA	-41	NA	119240946	119211741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119235144_119235228_119236852_119237071_119240849
transcript_101984.known	chr3	-	2494	8	FSM	ENSG00000121578.13	ENST00000483209.5	2494	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	51.2150328696247	1003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGTGTTTTTTATTGTT	-119237675	False	2964	6	True	AGTAAA	-23	NA	119240639	119211731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240360
transcript_101987.known	chr3	-	2234	8	FSM	ENSG00000121578.13	ENST00000393765.7	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_6	27.3361538282628	1243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237914	True	NA	-4	True	AATAAA	-41	NA	119240878	119211741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218649_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_101989.nic	chr3	-	2201	8	NIC	ENSG00000121578.13	novel	2385	9	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_2	47.0921805546075	919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTCCTTCGTGTT	-119237943	True	NA	-4	True	AATAAA	-41	NA	119240907	119211741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852_119237071_119240849
transcript_10199.nnic	chr1	+	745	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_3	28.0832096931007	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAGGATTTAATGTCAG	150641536	True	NA	9	True	AATAAA	-23	NA	150641655	150646712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150646257
transcript_101999.nic	chr3	-	849	3	ISM	ENSG00000121578.13	ENST00000393765.7	2234	8	-38	17939	-9	255	5prime_fragment	FALSE	canonical	3	95	junction_1	2.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAAAACTCAGAAGTGTA	-119237952	True	NA	NA	False	AATAAA	-24	NA	119240916	119229680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_119230245_119236852_119237071_119240849
transcript_102000.known	chr3	-	588	3	FSM	ENSG00000121578.13	ENST00000493932.5	588	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	47.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGCAAAGGAGTTCATGG	-119237700	False	2964	NA	False	NA	NA	NA	119240664	119229974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119230245_119236852_119237071_119240564
transcript_102002.known	chr3	-	2107	7	FSM	ENSG00000121578.13	ENST00000480814.5	2107	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	50.4658850666027	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTATCAAATACCTCTGTA	-119234107	False	NA	-41	True	AATAAA	-4	NA	119237071	119211778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119212682_119216239_119216345_119218711_119218773_119224057_119224246_119226808_119227042_119229846_119230245_119236852
transcript_102004.known	chr3	-	624	2	FSM	ENSG00000241155.1	ENST00000466292.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGCACCCTGGAGGATG	-119322723	False	NA	NA	False	NA	NA	NA	119322760	119314292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119314770_119322613
transcript_102007.known	chr3	-	4393	10	FSM	ENSG00000176142.13	ENST00000438581.6	4393	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	72.9032844862897	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTTGGCAAGTTAAA	-119461807	True	NA	-3	True	ATTAAA	-19	NA	119463597	119429499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119451208_119451318_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_10201.nnic	chr1	+	859	4	Antisense	novelGene_ENSG00000143457.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_3	28.0832096931007	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCTCAGTGCACATCC	150641536	True	NA	8	True	AATAAA	-13	NA	150641655	150646826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_150641795_150642029_150642087_150642992_150643087_150646257
transcript_102011.known	chr3	-	4853	9	FSM	ENSG00000176142.13	ENST00000319172.10	4853	9	0	0	0	0	multi-exon	FALSE	canonical	2	136	junction_1	24.4028686838249	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACAGATGTCTTGGAAC	-119461825	True	NA	NA	False	AATAAA	-29	NA	119463615	119428948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119432215_119434761_119434883_119436790_119436979_119437754_119438104_119447017_119447173_119452446_119452531_119458017_119458241_119461961_119462149_119463335
transcript_102048.nnic	chr3	+	1444	11	NNC	ENSG00000163389.12	novel	3508	11	NA	NA	-34	-386	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_10	41.3677410550782	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTAAGTTGTATTGCT	119467120	True	NA	NA	False	AATAAA	-28	NA	119468928	119492091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119491762
transcript_102049.known	chr3	+	3508	11	FSM	ENSG00000163389.12	ENST00000295588.9	3508	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	11.8697093477473	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGCTTTGTCTTTATTTA	119467154	True	NA	13	True	AATGAA	-24	NA	119468962	119494708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119469107_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327_119485388_119486832_119486933_119488928_119488988_119490550_119490719_119491517_119491575_119492281
transcript_102061.known	chr3	+	567	6	FSM	ENSG00000163389.12	ENST00000476573.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61.346882561382	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTACAGCATATTTCC	119467154	True	NA	NA	False	ATTAAA	-45	NA	119468962	119485357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119469007_119469819_119469911_119471308_119471453_119477312_119477449_119480050_119480173_119485327
transcript_102067.known	chr3	+	725	6	FSM	ENSG00000113845.10	ENST00000492164.5	725	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	235.936940727814	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTCCCTGAGAAAATTGA	119489249	True	NA	NA	False	NA	NA	NA	119498574	119523630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119503531_119503621_119503953_119504022_119513640_119513720_119517204_119517316_119523605
transcript_102074.nic	chr3	+	1064	4	NIC	ENSG00000113845.10	novel	725	6	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	280.185652737609	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	NA	False	NA	14	True	AATAAA	-21	NA	119498514	119524066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_119498928_119513640_119513720_119517204_119517316_119523605
transcript_102078.known	chr3	+	684	3	FSM	ENSG00000113845.10	ENST00000498399.1	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	301	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTTGAATTTTACAGT	119498804	False	NA	9	True	AATAAA	-16	NA	119498816	119524061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498934_119517204_119517316_119523605
transcript_102079.known	chr3	+	1271	6	FSM	ENSG00000113845.10	ENST00000264244.7	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	217.227622552934	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAATTTTACAGTTCGTA	119489226	True	NA	14	True	AATAAA	-21	NA	119498551	119524066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119498928_119500694_119500861_119503531_119503621_119503953_119504022_119517204_119517316_119523605
transcript_102083.known	chr3	-	471	4	FSM	ENSG00000138495.7	ENST00000484810.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	1279.15623231358	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662236	True	NA	-17	True	AGTAAA	-16	NA	119677346	119669531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119669666_119675144_119675234_119676861_119676967_119677203
transcript_102091.known	chr3	-	426	3	FSM	ENSG00000138495.7	ENST00000261070.7	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2764	junction_1	276.5	21934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662296	True	NA	-17	True	AGTAAA	-16	NA	119677406	119669531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119669666_119675144_119675234_119677203
transcript_102092.known	chr3	-	430	4	FSM	ENSG00000138495.7	ENST00000486606.5	430	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	1546.63010014246	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTTCAGTTGTGTTTCTT	-119662184	False	NA	-17	True	AGTAAA	-16	NA	119677294	119669531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119669666_119674672_119674789_119675144_119675234_119677203
transcript_102093.known	chr3	-	660	3	FSM	ENSG00000138495.7	ENST00000497116.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1625.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTAATGTCAAAAATGCAA	-119662254	True	NA	NA	False	AATAAA	-42	NA	119677364	119674378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119674789_119675144_119675234_119677203
transcript_102095.known	chr3	+	939	6	FSM	ENSG00000183833.16	ENST00000463700.1	939	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	2.92574776766556	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	119702858	True	NA	NA	False	AATAAA	-22	NA	119703032	119715934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_119703223_119706808_119706886_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_102097.nic	chr3	+	865	5	ISM	ENSG00000183833.16	ENST00000482573.5	4356	17	8	51168	-3	0	5prime_fragment	FALSE	canonical	1	2	junction_1	6.74536878161602	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTTATCGTACTCTAT	119702855	True	NA	NA	False	AATAAA	-22	NA	119703029	119715934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_119703223_119707403_119707562_119708590_119708675_119709838_119709896_119715561
transcript_1021.known	chr1	-	1381	4	FSM	ENSG00000205090.9	ENST00000378733.9	1381	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.62466929133727	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCGCCTCTTCTGTCAC	-1540534	False	NA	0	True	AGTAAA	-18	NA	1540624	1534777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1535508_1535588_1535798_1539683_1539791_1540289
transcript_102101.known	chr3	-	7743	11	FSM	ENSG00000082701.17	ENST00000264235.13	7743	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	10.8300507847378	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTGTGGTCCTCTTATT	-120092584	True	NA	NA	False	AATAAA	-18	NA	120094447	119821320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119826856_119843254_119843354_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_102102.known	chr3	-	1731	10	FSM	ENSG00000082701.17	ENST00000650344.2	1731	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	38.8272527428294	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGTGTTCAATTTTTT	-120093796	False	1863	-12	True	ATTAAA	-21	NA	120093891	119826677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_119826856_119863418_119863606_119876412_119876509_119905754_119905853_119912703_119912811_119916043_119916175_119923372_119923484_119947267_119947352_120002045_120002240_120093346
transcript_102105.known	chr3	+	982	2	FSM	ENSG00000242622.3	ENST00000469070.1	982	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGTGTGCCCAAATGGG	120094820	True	NA	NA	False	NA	NA	NA	120095269	120099186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120095779_120098713
transcript_102108.nnic	chr3	+	730	4	Fusion	ENSG00000286735.1_ENSG00000065518.8	novel	425	2	NA	NA	40689	0	multi-exon	FALSE	canonical	1	4	junction_2	2181.4262918253	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	NA	False	NA	27	True	AATAAA	-19	NA	120489662	120602328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_120490051_120499505_120499580_120601110_120601258_120602207
transcript_102110.known	chr3	-	540	3	FSM	ENSG00000163430.12	ENST00000472536.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	511	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGCTTATAAGCTTCCT	-120434936	True	NA	NA	False	ATTAAA	-15	NA	120450992	120421171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120421553_120450683_120450747_120450896
transcript_102121.known	chr3	+	558	3	FSM	ENSG00000065518.8	ENST00000491335.1	558	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	2301	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTAGTTTCTCTTTCTTA	120567658	True	NA	27	True	AATAAA	-19	NA	120596356	120602328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596647_120601110_120601258_120602207
transcript_102126.known	chr3	+	309	2	FSM	ENSG00000065518.8	ENST00000492739.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAAGTAGTAGTTTCTCTT	120567648	True	NA	22	True	AATAAA	-14	NA	120596346	120602323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596540_120602207
transcript_102127.known	chr3	+	651	3	FSM	ENSG00000065518.8	ENST00000184266.3	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	4286	junction_1	174.5	12603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTCTACAATCAGTTGT	120567637	True	NA	NA	False	ATTAAA	-21	NA	120596335	120602507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596540_120601110_120601258_120602207
transcript_102128.known	chr3	+	1426	2	FSM	ENSG00000065518.8	ENST00000485064.1	1426	2	0	0	0	0	multi-exon	FALSE	canonical	3	4286	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTAGTAGTTTCTCTTT	120567629	True	NA	23	True	AATAAA	-15	NA	120596327	120602324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120596540_120601110
transcript_102130.known	chr3	-	1007	9	FSM	ENSG00000144840.10	ENST00000491398.5	1007	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	67.8449519124304	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGGAAAAATGAAAGG	-120739395	True	NA	NA	False	NA	NA	NA	120742533	120689693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738526_120738668_120742461
transcript_102136.known	chr3	-	3960	9	FSM	ENSG00000144840.10	ENST00000648525.1	3960	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	68.2843320242645	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGCTTTTCTCAATAA	-120739378	True	NA	NA	False	AATAAA	-2	NA	120742516	120686700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120738549_120738668_120742461
transcript_102138.known	chr3	-	5605	8	FSM	ENSG00000144840.10	ENST00000273375.8	5605	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	10.6291858501362	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTGTAGCTGTGTAAG	-120739378	True	NA	NA	False	ATTAAA	-30	NA	120742516	120684937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_102144.known	chr3	-	760	7	FSM	ENSG00000144840.10	ENST00000483733.1	760	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	56.4170974872768	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTACCCTTCAGCCTTACC	-120739382	True	NA	NA	False	NA	NA	NA	120742520	120689714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120698422_120698574_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_102162.known	chr3	+	3000	5	FSM	ENSG00000153767.10	ENST00000283875.6	3000	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	31.3169283295792	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAAGTTTGTTCATTTTAA	120733986	True	NA	16	True	AATAAA	-16	NA	120742743	120783069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120742795_120750522_120751001_120770727_120770930_120776422_120776665_120781042
transcript_102167.known	chr3	+	567	2	FSM	ENSG00000153767.10	ENST00000497393.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGATTCATCTAATTT	120734004	True	NA	NA	False	AATAAA	-21	NA	120742761	120751056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120742795_120750522
transcript_102169.known	chr3	-	839	7	FSM	ENSG00000144840.10	ENST00000465022.5	839	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.6375846044899	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAATGACAGTGTACTGCA	-120739372	True	NA	-30	True	AGTAAA	-3	NA	120742510	120689546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_120689889_120690448_120690488_120694152_120694225_120705999_120706115_120709779_120709910_120730695_120730788_120742461
transcript_10217.known	chr1	-	456	2	FSM	ENSG00000143457.11	ENST00000479757.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGATACTTGGAGGGTA	-150691889	True	NA	NA	False	NA	NA	NA	150697108	150694511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150694851_150696991
transcript_102175.nnic	chr3	+	696	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-52	-128809	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	13	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATAGCATAAAATCGACAT	120908142	True	NA	14	True	AATAAA	-17	NA	120908152	120916637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_102176.nnic	chr3	+	772	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-52	-128733	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	13	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGATTTAATACCTGG	120908142	True	NA	90	True	AATAAA	-23	NA	120908152	120916713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_102177.nnic	chr3	+	905	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-52	-128600	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	13	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGATTGGTTAATGT	120908142	True	NA	NA	False	AATAAA	-23	NA	120908152	120916846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120916320
transcript_102178.nnic	chr3	+	755	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-52	-106271	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	17	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACGTAAAGTGTTTTTCA	120908142	True	NA	NA	False	AATAAA	-20	NA	120908152	120939175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120938799
transcript_102179.nnic	chr3	+	590	3	NNC	ENSG00000145087.13	novel	2321	9	NA	NA	-52	-106267	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	16.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAAGTGTTTTTCATTGT	120908142	True	NA	NA	False	AATAAA	-24	NA	120908152	120939179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_120908335_120909570_120909768_120938968
transcript_102186.known	chr3	+	2321	9	FSM	ENSG00000145087.13	ENST00000461772.5	2321	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.71387538524146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGCCTTGATGTCTTTT	120907207	True	NA	NA	False	AATAAA	-25	NA	120908235	121158968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_120908335_120909570_120909768_120954943_120955038_121041699_121041782_121045434_121045536_121114924_121115060_121121640_121121705_121152476_121152561_121157503
transcript_102189.nnic	chr3	-	468	4	NIC	ENSG00000286827.1	novel	2814	5	NA	NA	-1	-2596	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.69967317119759	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTGGTCATCCCAGTA	-120907756	True	NA	NA	False	AATAAA	-28	NA	120907906	120864457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_120864594_120868268_120868384_120872176_120872254_120907766
transcript_102195.nic	chr3	-	1895	3	ISM	ENSG00000051341.15	ENST00000264233.6	8757	30	-20	108628	-20	-2959	5prime_fragment	FALSE	canonical	3	43	junction_1	10	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTATTAAAGTCCCACTG	-121542262	True	NA	NA	False	ACTAAA	-11	NA	121546008	121540058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_121541480_121544726_121544907_121545714
transcript_102199.known	chr3	-	8757	30	FSM	ENSG00000051341.15	ENST00000264233.6	8757	30	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	21.6780024616044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATATCAACAATTGTTT	-121542242	True	NA	-12	True	AATAAA	-17	NA	121545988	121431430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121432418_121432917_121433034_121436121_121436276_121439991_121440117_121449314_121449427_121460049_121460235_121467518_121467641_121468304_121468432_121471989_121472165_121473349_121473488_121476539_121476734_121481571_121481813_121483385_121483583_121485040_121485185_121487301_121490409_121493477_121493722_121496807_121496933_121498476_121498671_121509560_121509704_121510038_121510244_121511886_121512030_121519870_121520084_121522002_121522150_121529644_121529793_121532989_121533210_121537099_121537209_121539432_121539590_121541348_121541480_121544726_121544907_121545714
transcript_1022.known	chr1	-	796	2	FSM	ENSG00000205090.9	ENST00000624426.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCGCATGTGTGTGGCGTCT	-1540260	False	NA	-5	True	AATAAA	-16	NA	1540350	1539055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1539791_1540289
transcript_10220.known	chr1	-	1641	8	FSM	ENSG00000143387.14	ENST00000676970.1	1641	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	23.84730336015	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-150807720	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150796899_150799167_150799286_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150808213
transcript_102202.known	chr3	-	1992	14	FSM	ENSG00000180353.11	ENST00000314583.8	1992	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	3.42804307002418	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGAGGTAAATAGTACTT	-121660835	True	NA	0	True	AATAAA	-23	NA	121660903	121631398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121637145_121637257_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_102203.known	chr3	-	1560	13	FSM	ENSG00000180353.11	ENST00000428394.6	1560	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.56195171219375	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGCTTGGGGCAGAGACA	-121660830	True	NA	NA	False	NA	NA	NA	121660898	121631714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121631983_121632100_121632185_121632331_121632564_121633066_121633172_121634206_121634419_121635734_121635805_121636433_121636490_121642926_121642982_121644817_121644929_121647318_121647449_121657278_121657353_121658263_121658348_121660819
transcript_102205.known	chr3	-	11198	22	FSM	ENSG00000173230.16	ENST00000393667.7	11198	22	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_16	51.4841410537784	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGTTTGTGTGTATGTGT	-121742902	True	NA	NA	False	AATAAA	-16	NA	121749740	121663202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121664615_121664925_121665032_121667475_121667611_121668060_121668159_121669196_121669356_121676892_121677031_121677284_121677451_121681686_121681866_121690669_121692582_121693740_121698930_121699811_121699886_121702480_121702596_121714860_121714977_121716736_121717140_121718387_121718502_121719645_121719769_121722261_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_102209.nic	chr3	-	1175	6	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-119	26413	-30	7237	5prime_fragment	FALSE	canonical	3	42	junction_2	12.3385574521497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATAATTAGGTTCATT	-121749760	False	NA	NA	False	AGTAAA	-11	NA	121749785	121721890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_121722379_121726912_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_102211.nic	chr3	-	599	5	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-119	31523	-30	2127	5prime_fragment	FALSE	canonical	3	42	junction_1	12.7549010188241	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAAACATAAGCTCCAGG	-121749760	False	NA	NA	False	AATAGA	-4	NA	121749785	121727000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_121727042_121729187_121729341_121729864_121730018_121730875_121730974_121749631
transcript_102213.nic	chr3	-	441	4	ISM	ENSG00000173230.16	ENST00000494517.5	4959	12	-119	33827	-30	-177	5prime_fragment	FALSE	canonical	3	56	junction_2	7.78888096369861	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAACTTCATGCGAAGGC	-121749760	False	NA	NA	False	ATTAAA	-4	NA	121749785	121729304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_121729341_121729864_121730018_121730875_121730974_121749631
transcript_102215.known	chr3	-	2577	15	FSM	ENSG00000173226.17	ENST00000310864.11	2577	15	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_13	19.2130907753765	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGTTTCCCTTTTTGT	-121831210	True	NA	0	True	ATTAAA	-18	NA	121835060	121769760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121795456_121795567_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_102216.known	chr3	-	1919	12	FSM	ENSG00000173226.17	ENST00000349820.10	1919	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	61.4291233055026	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-121831184	True	NA	-2	True	AATAAA	-26	NA	121835034	121769993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_102217.known	chr3	-	571	2	FSM	ENSG00000173226.17	ENST00000471726.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTTAATACATGAAAGCA	-121831142	True	NA	NA	False	ATTAAA	-1	NA	121834992	121833935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121834480_121834965
transcript_102218.known	chr3	-	2253	14	FSM	ENSG00000173226.17	ENST00000393650.7	2253	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	59.1328861535785	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCAGGATTATTTCAAC	-121831229	True	NA	-2	True	AATAAA	-26	NA	121835079	121769993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121770575_121772556_121772714_121781742_121781875_121788283_121788433_121790072_121790216_121797117_121797228_121799195_121799375_121807343_121807444_121808915_121809010_121826050_121826181_121828469_121828633_121828860_121828973_121834390_121834480_121834965
transcript_102219.known	chr3	+	998	6	FSM	ENSG00000145088.9	ENST00000273668.7	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	7.90948797331408	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTTATGTATTTGTT	121834193	True	NA	9	True	ATTAAA	-19	NA	121835208	121886526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121835392_121844452_121844548_121854686_121854824_121857010_121857157_121872536_121872789_121886341
transcript_102221.known	chr3	+	829	5	FSM	ENSG00000145088.9	ENST00000490434.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	42.5051467471882	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAATATGTCTTAACTTT	121834167	True	NA	-49	True	AATAAA	-16	NA	121835182	121886468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121835392_121844452_121844548_121857010_121857157_121872536_121872789_121886341
transcript_102223.known	chr3	+	5447	22	FSM	ENSG00000163406.11	ENST00000489711.6	5447	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.20147358361364	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGACTGTCACCATT	121894258	True	NA	7	True	ATTAAA	-20	NA	121894400	121944188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_121894582_121896405_121896494_121897387_121897530_121911573_121911667_121913020_121913121_121915226_121915318_121915615_121915694_121922219_121922303_121922774_121922862_121923039_121923130_121923221_121923267_121924350_121924384_121924944_121925034_121927757_121927840_121928420_121928556_121928981_121929147_121929301_121929349_121930839_121930951_121931638_121931736_121939348_121939496_121940383_121940489_121940830
transcript_10223.known	chr1	-	1410	7	FSM	ENSG00000143387.14	ENST00000679260.1	1410	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.2958594121246	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-150807720	True	NA	1	True	AATAAA	-21	NA	150808260	150796207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150805860_150806017_150806101_150806225_150806685_150806807_150808213
transcript_102231.known	chr3	-	2659	7	FSM	ENSG00000145103.15	ENST00000273691.7	2659	7	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_2	7.49258893099634	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCATTTGATTGGA	-122021789	True	NA	0	True	AATAAA	-15	NA	122022183	121987322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_121988409_121993149_121993971_122001307_122001455_122001744_122001865_122005243_122005394_122006990_122007162_122022019
transcript_102232.known	chr3	+	744	3	FSM	ENSG00000121552.4	ENST00000264474.4	744	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	122325247	122341969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122325359_122337546_122337649_122341438
transcript_102241.known	chr3	-	545	5	FSM	ENSG00000160124.9	ENST00000479899.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	250.460575739975	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGGCGGGCTTTCTAGGA	-122373302	True	NA	62	True	NA	NA	NA	122383227	122359787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383147
transcript_10225.known	chr1	-	1720	8	FSM	ENSG00000143387.14	ENST00000676966.1	1720	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	24.7146985927527	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTTGGATACTGTGT	-150806727	False	NA	1	True	AATAAA	-21	NA	150807267	150796207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150796899_150799167_150799274_150799543_150799710_150804020_150804240_150805860_150806017_150806101_150806225_150806685_150806807_150807129
transcript_102252.known	chr3	-	438	3	FSM	ENSG00000160124.9	ENST00000497726.5	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	238.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTGTACATATTTATTT	-122373306	True	NA	NA	False	ATTAAA	-13	NA	122383231	122359599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122383173
transcript_102253.known	chr3	-	720	5	FSM	ENSG00000160124.9	ENST00000291458.9	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	49.4797938556741	2957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTATTTGATTGTTTT	-122373306	True	NA	NA	False	ATTAAA	-22	NA	122383231	122359590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122368175_122368323_122371674_122371801_122383173
transcript_102254.known	chr3	-	573	3	FSM	ENSG00000160124.9	ENST00000460810.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	241	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTT	-122365562	False	NA	NA	False	NA	NA	NA	122365574	122359645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122359920_122362967_122363028_122365335
transcript_10226.known	chr1	-	3538	22	FSM	ENSG00000143437.21	ENST00000354396.6	3538	22	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	76.078220875688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTAAGAGGTTTTTCCTC	-150871651	True	NA	NA	False	NA	NA	NA	150876579	150810858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816401_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_102260.known	chr3	+	801	6	FSM	ENSG00000114023.16	ENST00000232125.9	801	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1241.89654963689	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCATAAAGTATGATTT	122364595	True	NA	-23	True	ATTAAA	-21	NA	122384175	122409917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122384300_122401375_122401536_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_102267.known	chr3	+	3052	5	FSM	ENSG00000114023.16	ENST00000477892.5	3052	5	0	0	0	0	multi-exon	FALSE	canonical	3	2440	junction_1	53.3853912601566	7806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTACTTTTTATTTTTAA	122364601	True	NA	25	True	AATAAA	-18	NA	122384181	122412334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122384300_122402759_122402883_122404257_122404364_122407280_122407390_122409738
transcript_102268.known	chr3	-	1923	15	FSM	ENSG00000114030.13	ENST00000494339.5	1923	15	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_10	109.267972416067	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAATACTCTGCTTTCACG	-122508623	True	NA	NA	False	NA	NA	NA	122514934	122426984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122457725_122457849_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_102269.known	chr3	-	6888	14	FSM	ENSG00000114030.13	ENST00000344337.11	6888	14	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_4	17.4172600240555	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGGAATTCCCTTATG	-122508628	True	NA	44	True	AGTAAA	-21	NA	122514939	122421901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514756
transcript_102273.nic	chr3	-	3002	14	NIC	ENSG00000114030.13	novel	6888	14	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_13	70.8188789057512	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGATGACTGCAATCTGTA	-122508638	True	NA	-25	True	AATAAA	-27	NA	122514949	122425679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_122427173_122427537_122427717_122433660_122433789_122437169_122437296_122442037_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_10229.known	chr1	-	2427	21	FSM	ENSG00000143437.21	ENST00000505755.5	2427	21	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_17	46.569410561011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTTTCTGTAAACAGAA	-150871681	True	NA	-55	True	AAAAAG	-2	NA	150876609	150811960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814240_150816258_150816407_150816787_150816891_150817081_150817203_150817360_150817434_150817919_150818031_150823193_150823346_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_102290.nnic	chr3	+	415	3	NNC	ENSG00000272758.7	novel	463	2	NA	NA	1	-141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCTTTGTTTCTACTCAT	122416064	True	NA	4	True	AATAAA	-1	NA	122416200	122421261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_122416251_122418715_122418805_122420985
transcript_102291.nnic	chr3	+	349	3	NNC	ENSG00000272758.7	novel	265	2	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCATCAGCTTTTTTT	122416064	True	NA	NA	False	AATAAA	-21	NA	122416200	122421400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_122416251_122418715_122418805_122421190
transcript_102294.known	chr3	-	1062	10	FSM	ENSG00000114030.13	ENST00000465882.5	1062	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_9	84.4118358092712	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGACACAGGTATGAAGAA	-122508634	True	NA	NA	False	NA	NA	NA	122514945	122442047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122442117_122449573_122449738_122451533_122451634_122451975_122452065_122453869_122454002_122461223_122461319_122463941_122464042_122467321_122467430_122496436_122496571_122514874
transcript_102295.known	chr3	+	453	2	FSM	ENSG00000272758.7	ENST00000667395.2	463	2	8	2	6	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCCATCAGCTTTTTTT	122416076	True	NA	NA	False	AATAAA	-21	NA	122416212	122421400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122416251_122420985
transcript_102297.nic	chr3	-	743	2	ISM	ENSG00000114030.13	ENST00000494339.5	1923	15	-13	69034	-2	-42109	5prime_fragment	FALSE	canonical	3	301	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCATACATAAACCAGTCC	-122508636	True	NA	NA	False	AATAAA	-1	NA	122514947	122496018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_122496571_122514756
transcript_102299.known	chr3	+	442	2	FSM	ENSG00000272758.7	ENST00000608465.5	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATCAGCTTTTTTTTTTT	122416088	True	NA	NA	False	AATAAA	-25	NA	122416224	122421404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122416251_122420988
transcript_102300.known	chr3	+	1271	2	FSM	ENSG00000287207.1	ENST00000659697.1	1271	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTGAGATATTTTTAT	122514969	True	NA	NA	False	AATAAA	-31	NA	122515005	122518172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_122515129_122517024
transcript_102301.known	chr3	-	3045	11	FSM	ENSG00000138496.17	ENST00000682323.1	3045	11	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	5.30659966456864	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCTCTGAAAAATTATGT	-122564274	False	NA	NA	False	AATAAA	-19	NA	122564300	122527923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122528744_122536167_122536343_122536933_122537074_122540471_122540853_122545431_122545490_122550583_122550803_122552417_122552640_122555285_122556122_122558433_122558468_122559605_122559710_122564244
transcript_102304.nic	chr3	+	1221	5	ISM	ENSG00000173193.15	ENST00000474629.7	7694	17	-198	35035	-198	179	5prime_fragment	FALSE	canonical	3	36	junction_2	7.1894019222742	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGATGCTTAATAAGGC	122680614	False	NA	NA	False	AATAAA	-18	NA	122680640	122695805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_122681071_122685184_122685319_122687079_122687114_122692300_122692544_122695425
transcript_102310.known	chr3	-	1964	8	FSM	ENSG00000169087.11	ENST00000306103.3	1964	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	6.13787173112595	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGCCATTCATTTACAT	-122792637	True	NA	-18	True	AATAAA	-17	NA	122793831	122739998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122740876_122741002_122741114_122752590_122752675_122755259_122755432_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_102311.known	chr3	-	838	6	FSM	ENSG00000169087.11	ENST00000467643.5	838	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	30.4919661550383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAAGCGTTTTCCTCAGT	-122792565	True	NA	NA	False	AGTAAA	-21	NA	122793759	122755323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_122755432_122758771_122758854_122759223_122759361_122768700_122768883_122777720_122777907_122793616
transcript_102312.nic	chr3	-	1630	5	ISM	ENSG00000082684.16	ENST00000451055.6	4579	23	63843	0	-24	0	3prime_fragment	FALSE	canonical	3	61	junction_3	7.49583217528247	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTCTCTGTGCATCTGT	NA	False	NA	-7	True	ATTAAA	-18	NA	122912291	122909192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_122910302_122910839_122911046_122911490_122911536_122911919_122912070_122912171
transcript_102316.known	chr3	+	1844	17	FSM	ENSG00000065485.20	ENST00000316218.12	1844	17	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_12	31.3687120193036	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063810	True	NA	13	True	AATAAA	-14	NA	123067024	123162104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123130479_123130617_123145521_123145593_123146098_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_102319.known	chr3	+	1651	16	FSM	ENSG00000065485.20	ENST00000489923.5	1651	16	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_11	93.970917486919	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTATGGTTTATTT	123063847	True	NA	13	True	AATAAA	-14	NA	123067061	123162104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123067207_123089167_123089295_123092354_123092443_123102410_123102495_123102750_123102797_123106748_123106842_123110943_123111005_123116230_123116299_123124065_123124158_123124271_123124344_123145521_123145593_123146117_123146260_123150233_123150365_123154970_123155042_123161320_123161456_123161879
transcript_102328.known	chr3	+	3401	7	FSM	ENSG00000121542.12	ENST00000492595.6	3401	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	13.6381816969859	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTTTCATTATTTGG	123200770	True	NA	18	True	TATAAA	-18	NA	123201942	123274136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_102332.nic	chr3	+	1541	7	NIC	ENSG00000121542.12	novel	4228	6	NA	NA	-14	268	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	36.7362975210561	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTGCACACTTATGG	123200819	True	NA	11	True	AATAAA	-19	NA	123201991	123272177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_123202135_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_102335.nnic	chr3	+	1326	6	NIC	ENSG00000121542.12	novel	3401	7	NA	NA	-69	268	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	39.4390669260823	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTGCACACTTATGG	123200685	True	NA	11	True	AATAAA	-19	NA	123201857	123272177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_123201987_123223558_123223723_123225102_123225298_123245898_123246015_123259523_123259590_123271521
transcript_102336.nic	chr3	+	906	6	ISM	ENSG00000121542.12	ENST00000492595.6	3401	7	-20	14447	-4	-11975	5prime_fragment	FALSE	canonical	3	71	junction_1	14.9318451639441	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGCTTCTCTTTTAA	123200750	True	NA	NA	False	AATAAA	-16	NA	123201922	123259689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_123201987_123209198_123209400_123223558_123223723_123225102_123225298_123245898_123246015_123259523
transcript_102338.known	chr3	+	673	4	FSM	ENSG00000121542.12	ENST00000481965.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.3347107202827	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAGACTATCATTCAGA	123200796	True	NA	NA	False	NA	NA	NA	123201968	123271909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123201987_123209198_123209400_123259523_123259590_123271521
transcript_102343.nic	chr3	-	2813	10	ISM	ENSG00000173175.15	ENST00000309879.9	2841	21	101303	-634	3113	0	3prime_fragment	FALSE	canonical	3	97	junction_8	16.7648957167965	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123314810	False	NA	-28	True	AATAAA	-8	NA	123315039	123283943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123304066_123304184_123314234
transcript_102345.nnic	chr3	-	2233	9	NIC	ENSG00000173175.15	novel	3962	23	NA	NA	3576	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_8	34.1906419945575	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTCCGTGCCCTTCTT	-123313073	True	NA	-28	True	AATAAA	-8	NA	123314576	123283943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_123284737_123286684_123286810_123289749_123289955_123291112_123291377_123296083_123296217_123297352_123297383_123300119_123300296_123303054_123303220_123314234
transcript_102351.known	chr3	-	4125	7	FSM	ENSG00000206527.10	ENST00000383657.10	4125	7	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	15.1520075677559	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCAGTGAGTGCAGT	-123582129	True	NA	-8	True	AATAAA	-29	NA	123585053	123491553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123494971_123500514_123500694_123502559_123502682_123528385_123528475_123567761_123567781_123582211_123582330_123584872
transcript_102358.known	chr3	+	1033	5	FSM	ENSG00000239523.7	ENST00000664745.1	1033	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	123585300	False	NA	NA	False	AATAAA	-31	NA	123585313	123630821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585646_123585802_123611234_123611356_123629490_123629682_123630495
transcript_102360.known	chr3	+	677	4	FSM	ENSG00000239523.7	ENST00000664237.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	123585215	True	NA	NA	False	AATAAA	-31	NA	123585538	123630821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585646_123585795_123629493_123629682_123630495
transcript_102361.known	chr3	+	655	4	FSM	ENSG00000239523.7	ENST00000657993.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTAACTATTTTAAAAG	123585206	True	NA	NA	False	AATAAA	-31	NA	123585529	123612593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585646_123585802_123611234_123611356_123612238
transcript_102366.known	chr3	+	760	3	FSM	ENSG00000239523.7	ENST00000470449.2	779	3	10	9	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCAGATTTGTGGCTTA	123585232	True	NA	NA	False	AATAAA	-31	NA	123585555	123630821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585802_123629493_123629682_123630495
transcript_102369.nic	chr3	+	724	3	FSM	ENSG00000239523.7	ENST00000687610.1	558	3	-4	-162	1	0	multi-exon	FALSE	canonical	1	1	junction_2	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATCATGAAAAATATTGT	123585216	True	NA	NA	False	AATAAA	-36	NA	123585539	123612579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585802_123611234_123611356_123612238
transcript_102370.known	chr3	+	2978	2	FSM	ENSG00000239523.7	ENST00000665710.1	2978	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGGTGGTGCGCGCCTG	123585207	True	NA	NA	False	AATACA	-12	NA	123585530	123588596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_123585554_123585641
transcript_102372.known	chr3	-	4131	13	FSM	ENSG00000175455.16	ENST00000409697.8	4131	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_9	49.9797181086711	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTGTCTACTCC	-123956561	True	NA	NA	False	AATAAA	-23	NA	123961229	123913421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123955842_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_102375.known	chr3	-	3260	12	FSM	ENSG00000175455.16	ENST00000433542.7	3260	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_8	63.0285256159647	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGTGTTGTTGGTGAAA	-123956710	True	NA	-3	True	ATTAAA	-17	NA	123961378	123914318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123915719_123931101_123931235_123931307_123931527_123933672_123933756_123944848_123944991_123946802_123947320_123948690_123948786_123948895_123949133_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_102377.nic	chr3	-	517	5	ISM	ENSG00000175455.16	ENST00000409697.8	4131	13	-154	42466	-2	189	5prime_fragment	FALSE	canonical	3	101	junction_1	33.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACATGAAAAACATACTATT	-123961370	False	NA	57	True	AAAAAG	-5	NA	123961383	123955887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_123955966_123956045_123956116_123956354_123956428_123956739_123956796_123961143
transcript_102379.known	chr3	-	555	3	FSM	ENSG00000175455.16	ENST00000478956.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	27.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGGGACATTTTGAGAAA	-123956550	True	NA	NA	False	NA	NA	NA	123961218	123956076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123956116_123956354_123956796_123961143
transcript_102381.known	chr3	-	374	2	FSM	ENSG00000175455.16	ENST00000463996.1	374	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCCCAGTAAATTCTCAA	-123956540	True	NA	NA	False	AATAAA	-18	NA	123961208	123897304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_123897614_123961143
transcript_102383.nnic	chr3	-	1095	3	Antisense	novelGene_ENSG00000160145.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	NA	False	NA	NA	False	AATAAA	-25	NA	124701062	124697950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_124698594_124699915_124700154_124700848
transcript_102387.known	chr3	+	2242	7	FSM	ENSG00000114491.14	ENST00000467167.5	2242	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	203.533508024819	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725862	True	NA	NA	False	NA	NA	NA	124730444	124744757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124731505_124731605_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_102390.known	chr3	+	6652	6	FSM	ENSG00000114491.14	ENST00000232607.7	6652	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	20.3921553544494	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTCATGGCATTTGTT	124725869	True	NA	30	True	AATAGA	-18	NA	124730451	124749273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124735092_124735247_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_102391.known	chr3	+	2340	6	FSM	ENSG00000114491.14	ENST00000479719.5	2340	6	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_3	164.992848329859	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725869	True	NA	NA	False	NA	NA	NA	124730451	124744757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124735092_124735247_124737567_124738444_124740023_124740200_124742151_124742267_124743914
transcript_102392.known	chr3	+	1789	6	FSM	ENSG00000114491.14	ENST00000474588.5	1789	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	165.801809399053	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725869	True	NA	NA	False	NA	NA	NA	124730451	124744757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124735092_124735247_124737914_124738240_124740023_124740200_124742151_124742267_124743914
transcript_102397.known	chr3	+	2001	5	FSM	ENSG00000114491.14	ENST00000462091.5	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	174.688830495828	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGCTTTTCTTGTGTCCTG	124725850	True	NA	NA	False	NA	NA	NA	124730432	124744757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_124730628_124737567_124738240_124740023_124740200_124742151_124742267_124743914
transcript_1024.known	chr1	+	2101	1	FSM	ENSG00000215014.5	ENST00000366221.3	2101	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTGTAACCATGTGCCT	1574906	True	NA	NA	False	AATAAA	-25	NA	1574974	1577075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1575000_1577100
transcript_102403.known	chr3	-	3485	14	FSM	ENSG00000221955.11	ENST00000469902.6	3485	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	9.88274451016793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTAATGGTGACTCATA	-125212397	True	NA	-6	True	ATTAAA	-14	NA	125212748	125082643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598_125120687_125135668_125135783_125177742_125177975_125187236_125187429_125190374_125190522_125211298_125211395_125212699
transcript_102406.known	chr3	-	2831	8	FSM	ENSG00000221955.11	ENST00000430155.6	2831	8	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_6	5.32993088747932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGACTCATATTCTCAAA	-125120799	False	NA	2	True	ATTAAA	-22	NA	125120854	125082635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125084053_125088309_125088371_125091438_125091557_125092100_125092199_125107480_125108127_125110188_125110336_125118768_125118857_125120598
transcript_10241.known	chr1	-	3703	17	FSM	ENSG00000143437.21	ENST00000471844.6	3703	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	108.421558626502	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTTGTGTGATCT	-150871777	True	NA	-22	True	NA	NA	NA	150876705	150810093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150812111_150813171_150813339_150814076_150814113_150817927_150818031_150826542_150826618_150829092_150829228_150829903_150829981_150831817_150831904_150832333_150832400_150834537_150834641_150836279_150836494_150839440_150839655_150842423_150842469_150846262_150846308_150852761_150852807_150858348_150858461_150876542
transcript_102410.known	chr3	-	439	3	FSM	ENSG00000221955.11	ENST00000481760.2	439	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTATTTCTT	-125212833	False	NA	NA	False	ATTAAA	-21	NA	125212864	125206667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125206846_125211298_125211395_125212699
transcript_102413.known	chr3	-	2960	10	FSM	ENSG00000163848.20	ENST00000485866.5	2960	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	27.7919963609741	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAATAATACTGGCACT	-125374259	True	NA	NA	False	NA	NA	NA	125375313	125232327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125314936_125315054_125323308_125323445_125331157_125331239_125375101
transcript_102415.known	chr3	-	9514	9	FSM	ENSG00000163848.20	ENST00000360647.9	9514	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	6.89202437604511	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTTGTCATTGAGT	-125375310	False	NA	-2	True	AATAAA	-19	NA	125375325	125225668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125331157_125331239_125375101
transcript_102416.known	chr3	-	2952	9	FSM	ENSG00000163848.20	ENST00000484491.5	2952	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	22.9561402461302	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGGAAAAAAAAAAGAC	-125374195	True	NA	2	True	NA	NA	NA	125375249	125232075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323387_125323445_125331157_125331239_125375101
transcript_10242.known	chr1	+	1229	2	FSM	ENSG00000283324.1	ENST00000636087.1	1229	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTGTGGTAACTTGTTA	NA	False	NA	NA	False	AATAAA	-20	NA	150887135	150913292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150887314_150912241
transcript_102421.known	chr3	-	2949	8	FSM	ENSG00000163848.20	ENST00000492394.5	2949	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	25.4301765143504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTTAAAAAGGAAAAAAAAAA	-125374197	True	NA	-1	True	NA	NA	NA	125375251	125232078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125233940_125234210_125234330_125277725_125277810_125279123_125279248_125288102_125288229_125313307_125313657_125323308_125323445_125375101
transcript_102426.known	chr3	-	2512	14	FSM	ENSG00000114520.11	ENST00000251775.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_10	22.546992347214	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAGATGATTTTTGTTA	-125515215	True	NA	-7	True	AATAAA	-21	NA	125520202	125446649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125504622_125504745_125520031
transcript_102430.known	chr3	-	1308	13	FSM	ENSG00000114520.11	ENST00000471751.5	1308	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	71.5333546908946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCACTACCTAGTATAC	-125515194	True	NA	-65	True	AATAAA	-8	NA	125520181	125447710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125447827_125451304_125451420_125453809_125453956_125457265_125457366_125460770_125460861_125469453_125469520_125476694_125476757_125480246_125480320_125489407_125489464_125497340_125497389_125497833_125497984_125498058_125498195_125520031
transcript_102434.known	chr3	-	4598	13	FSM	ENSG00000144909.8	ENST00000296220.6	4598	13	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_8	11.206087135521	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTCTGTCTCTTTTA	-125594115	True	NA	NA	False	AATAAA	-17	NA	125595497	125528857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125530581_125531860_125532015_125538450_125538634_125547405_125547593_125552180_125552680_125560378_125560520_125563697_125563844_125567393_125567596_125576188_125576366_125578959_125579040_125579864_125580041_125582909_125582979_125594636
transcript_10244.known	chr1	+	4437	22	FSM	ENSG00000143379.13	ENST00000271640.9	4437	22	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	17.9148907520419	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTGTGGTTTTGTTTCT	150923564	True	NA	13	True	GATAAA	-4	NA	150926338	150964735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917_150945109_150946885_150947013_150949121_150949279_150949369_150949526_150950457_150951091_150951364_150951482_150959177_150959348_150960562_150961192_150962129_150962159_150962586_150962720_150962973_150963140_150963529_150963742_150963994_150964084_150964246
transcript_102448.nnic	chr3	+	664	2	NNC	ENSG00000284624.1	novel	1151	2	NA	NA	-60	-67999	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	-16	True	AATAAA	-19	NA	125766455	125773291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_125766819_125772990
transcript_102451.known	chr3	+	1026	6	FSM	ENSG00000114547.10	ENST00000251776.8	1026	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.16619037896906	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGCGGAATTAAGATGTGA	NA	False	NA	NA	False	AATAAA	-21	NA	125969159	125983454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125969401_125972042_125972171_125975562_125975681_125977003_125977166_125982269_125982446_125983253
transcript_102454.known	chr3	-	805	6	FSM	ENSG00000189366.11	ENST00000340333.7	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	9.43186089804128	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	-125936857	True	NA	-3	True	AATGAA	-18	NA	125937039	125929274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125929568_125930556_125930630_125931637_125931753_125932649_125932710_125933574_125933697_125936897
transcript_102457.known	chr3	-	1245	6	FSM	ENSG00000189366.11	ENST00000692801.1	1404	6	8	151	1	0	multi-exon	FALSE	canonical	0	0	junction_5	28.4787640181241	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAGTTTTCATGTCTGA	-125990529	True	NA	-12	True	AAGAAA	-15	NA	125990565	125928839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_125929568_125930556_125930630_125931637_125931756_125932649_125932710_125933574_125933697_125990421
transcript_10246.known	chr1	-	2323	11	FSM	ENSG00000143418.20	ENST00000368954.10	2323	11	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_10	77.0091552998733	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150970233	True	NA	-20	True	AATAAA	-19	NA	150974835	150965185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150974618
transcript_102460.known	chr3	+	1910	5	FSM	ENSG00000171084.16	ENST00000467239.5	1910	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.9474565306379	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	125916499	True	NA	NA	False	AATAAA	-17	NA	125916619	125930010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125916720_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_102461.known	chr3	+	2012	5	FSM	ENSG00000171084.16	ENST00000485843.2	2027	5	15	0	5	0	multi-exon	FALSE	canonical	2	7	junction_1	3.20156211871642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGATGATCTGTGGCT	125916509	True	NA	NA	False	AATAAA	-31	NA	125916629	125930024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_125916818_125918863_125918927_125920824_125920906_125924965_125925116_125928494
transcript_102464.nnic	chr3	-	768	5	NIC	ENSG00000189366.11	novel	805	6	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	25.7827461687075	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCTTGGCTCTGATTT	-125936877	True	NA	0	True	AATGAA	-21	NA	125937059	125929271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_125929568_125930556_125930630_125931637_125931753_125933574_125933697_125936897
transcript_102470.known	chr3	-	1797	12	FSM	ENSG00000114544.17	ENST00000315891.10	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	17.2617189801236	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTGTACTTGACCCT	-126084210	True	NA	-17	True	AATAAA	-5	NA	126084304	126006372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_102471.known	chr3	-	1705	11	FSM	ENSG00000114544.17	ENST00000346785.9	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	22.4341257908571	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126084210	True	NA	-1	True	AATAAA	-21	NA	126084304	126006356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126006565_126007113_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_102472.known	chr3	-	2182	11	FSM	ENSG00000114544.17	ENST00000360370.9	2182	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	11.883181392203	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATGTCTTTAAAGAT	-126083140	True	NA	-1	True	AATAAA	-21	NA	126084124	126006356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126050942_126051051_126067946_126068247_126084092
transcript_102473.nic	chr3	-	2095	10	NIC	ENSG00000114544.17	novel	2182	11	NA	NA	18	0	intron_retention	FALSE	canonical	3	9	junction_8	19.7765292989218	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGACCCTTTATGTCTTT	-126083167	True	NA	-7	True	AATAAA	-15	NA	126084151	126006362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_126007226_126008731_126008881_126012614_126012750_126015493_126015574_126016730_126016876_126022785_126022933_126026334_126026480_126033606_126033679_126067946_126068247_126084092
transcript_102479.known	chr3	+	501	3	FSM	ENSG00000250934.3	ENST00000511512.2	789	3	42	246	-21	-239	multi-exon	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGACCCCTGAAAATAAT	126266756	False	NA	NA	False	AATAGA	-9	NA	126266795	126291279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126266859_126288012_126288124_126290952
transcript_102480.known	chr3	+	678	2	FSM	ENSG00000250934.3	ENST00000666921.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCAAGACTTTGGCTGGT	NA	False	NA	5	True	ATTAAA	-16	NA	126266746	126291518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126266859_126290952
transcript_102489.known	chr3	+	1000	8	FSM	ENSG00000159685.11	ENST00000290913.8	1000	8	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_4	30.1222000985239	2721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGCTGCCTACTCTGC	126696312	True	NA	37	True	AATAAA	-42	NA	126704239	126960420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126704400_126727077_126727187_126730560_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957415_126957552_126960195
transcript_10249.nnic	chr1	-	2174	11	NNC	ENSG00000143418.20	novel	2323	11	NA	NA	-494	0	intron_retention	FALSE	canonical	0	0	junction_10	186.952641061848	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCCTTGCAGTTATGT	-150975487	False	NA	-20	True	AATAAA	-19	NA	150975497	150965185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_150966289_150966475_150966630_150966755_150966863_150967073_150967203_150967391_150967485_150967663_150967715_150967819_150967878_150968082_150968202_150968394_150968513_150968917_150969092_150975429
transcript_1025.known	chr1	-	4176	2	FSM	ENSG00000160075.12	ENST00000359060.5	4176	2	0	0	0	0	multi-exon	FALSE	canonical	3	1740	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTAATTTATTATTATTA	-1548713	False	25871	3	True	AATAAA	-31	NA	1574584	1560847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1564917_1574477
transcript_102514.known	chr3	+	690	6	FSM	ENSG00000159685.11	ENST00000513253.1	690	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	191.247901949276	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCAGTCGTTGACTCAC	126730549	False	NA	8	True	AATAAA	-13	NA	126730563	126960391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_126730631_126733077_126733223_126852646_126852731_126914679_126914751_126957424_126957552_126960195
transcript_102515.known	chr3	-	1085	3	FSM	ENSG00000239620.3	ENST00000465482.3	1085	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTTTTAATGTGCTTATA	-127288035	True	NA	NA	False	AATAAA	-16	NA	127288046	127283782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127284641_127287313_127287373_127287878
transcript_102520.nnic	chr3	-	1952	12	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_10	65.8963624072862	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127597927	True	NA	-12	True	AATAAA	-18	NA	127598281	127573068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127594799_127594934_127598054
transcript_102522.nic	chr3	-	1818	11	NIC	ENSG00000163870.16	novel	1903	12	NA	NA	-14	0	combination_of_known_junctions	TRUE	canonical	3	8	junction_10	60.8720789853608	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTAATGTGGAGGTTTT	-127590755	False	354	-12	True	AATAAA	-18	NA	127591109	127573068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_127573789_127575184_127575266_127575402_127575506_127575748_127575810_127575939_127576051_127576616_127576697_127576820_127576894_127576989_127577077_127579739_127579873_127580021_127580164_127590882
transcript_102538.nnic	chr3	-	1011	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	12	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597927	True	NA	NA	False	AAAACA	-14	NA	127598281	127592352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127592955_127594799_127594934_127598006
transcript_102539.nnic	chr3	-	963	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	-12331	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1.5	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597927	True	NA	NA	False	AAAACA	-14	NA	127598281	127592352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127592955_127594799_127594934_127598054
transcript_102540.nnic	chr3	-	822	3	NNC	ENSG00000163870.16	novel	4235	13	NA	NA	-14	-12331	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	14	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGCCTCGTGTTGTGTGT	-127597927	True	NA	NA	False	AAAACA	-14	NA	127598281	127592352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_127592955_127594799_127594934_127598195
transcript_102543.known	chr3	+	3434	16	FSM	ENSG00000073111.14	ENST00000265056.12	3434	16	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	108.83026539831	322	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGTATCTGTTGGCTTC	127581051	True	NA	9	True	AATAAA	-18	NA	127598410	127622436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127598473_127599317_127599548_127604607_127604784_127604895_127605157_127606117_127606338_127606609_127606818_127608381_127608517_127608831_127609024_127615861_127615956_127616867_127617119_127617278_127617406_127617968_127618082_127619026_127619279_127620697_127620881_127621072_127621229_127621662
transcript_102547.known	chr3	+	2175	8	FSM	ENSG00000114631.11	ENST00000342480.7	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_4	29.0073882214268	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGCCTTCTTGACTCAT	127624178	True	NA	17	True	ATTAAA	-30	NA	127629184	127672802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127629290_127639244_127639524_127660377_127661160_127662236_127662312_127668440_127668598_127669140_127669203_127671433_127671614_127672267
transcript_102548.known	chr3	+	1915	12	FSM	ENSG00000114626.18	ENST00000475042.5	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	9.93699157959252	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGAGCCTGTGTCCTGGG	127672524	True	NA	11	True	AATAAA	-20	NA	127672957	127680920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127673082_127674390_127674419_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_102549.known	chr3	+	1962	12	FSM	ENSG00000114626.18	ENST00000232744.13	1962	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	6.91626421876736	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCCTGGGGTACAG	127672518	True	NA	17	True	AATAAA	-26	NA	127672951	127680926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127673082_127674390_127674454_127674544_127674601_127675969_127676115_127676271_127676432_127676535_127676582_127676966_127677084_127677167_127677287_127677464_127677564_127677675_127677844_127679984_127680186_127680268
transcript_102553.known	chr3	-	4941	8	FSM	ENSG00000074416.16	ENST00000265052.10	4271	8	-670	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.92724822331886	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCGTCTGTCTGTCCATCA	NA	False	NA	-3	True	AATAAA	-17	NA	127823185	127689065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_102554.known	chr3	-	4552	7	FSM	ENSG00000074416.16	ENST00000453507.7	4131	7	-421	0	303	0	multi-exon	FALSE	canonical	0	0	junction_2	2.06155281280883	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCTGTCCATCACAGT	NA	False	NA	1	True	AATAAA	-21	NA	127822882	127689061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_127692324_127694974_127695191_127721052_127721164_127722429_127722567_127781788_127781896_127821693_127821839_127822308
transcript_102556.nic	chr3	-	846	5	ISM	ENSG00000074416.16	ENST00000398101.7	1414	6	13712	-6	-1474	0	3prime_fragment	FALSE	canonical	1	1	junction_2	1.6583123951777	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	NA	False	NA	NA	False	NA	NA	NA	127722645	127692110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_127692324_127694974_127695191_127710575_127710666_127721052_127721164_127722429
transcript_102557.known	chr3	+	5727	6	FSM	ENSG00000187715.13	ENST00000405109.5	5727	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.95959179422654	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCACTTTCATTTTGTTTT	127915183	True	NA	NA	False	AATAAA	-16	NA	127915231	127987666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_127915587_127922949_127924132_127927763_127928035_127930132_127930284_127963188_127963387_127984096
transcript_102560.known	chr3	+	2205	7	FSM	ENSG00000132394.11	ENST00000254730.11	2205	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	20.7799315580094	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTCTCTCTCTGTG	128151572	True	NA	19	True	AATAAA	-26	NA	128153480	128408646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128153824_128246835_128247044_128262127_128262225_128264616_128264782_128341232_128341890_128358216_128358374_128408068
transcript_102563.known	chr3	+	3568	12	FSM	ENSG00000058262.10	ENST00000243253.8	3568	12	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_8	53.6408318631917	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATCATGTTCTCTTGAT	128039908	True	NA	22	True	AATAAA	-20	NA	128052436	128071683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128052560_128052834_128052903_128055515_128055582_128055672_128055752_128056708_128056841_128060101_128060212_128060507_128060662_128064876_128065038_128066953_128067152_128067420_128067613_128067982_128068060_128069475
transcript_102571.known	chr3	-	2126	10	FSM	ENSG00000175792.12	ENST00000464873.5	2126	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	420.629686699992	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGTTATTAGACTC	-128153892	False	NA	NA	False	AATAAA	-12	NA	128153914	128064784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128065221_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128153202
transcript_102577.known	chr3	-	1899	11	FSM	ENSG00000175792.12	ENST00000322623.10	1899	11	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_6	75.6198386668472	1589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTTTTACCTAATGTC	-128107832	True	NA	NA	False	NA	NA	NA	128123812	128080809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128081410_128082482_128082575_128087705_128087809_128097299_128097499_128098881_128098946_128100594_128100745_128101558_128101649_128104772_128104925_128112887_128113021_128119327_128119415_128123583
transcript_102579.known	chr3	-	2284	10	FSM	ENSG00000163902.12	ENST00000296255.8	2284	10	0	0	0	0	multi-exon	FALSE	canonical	3	1424	junction_5	72.1840924988085	701	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGTCTGTTGAAGAT	-128617389	True	NA	-21	True	AATAAA	-20	NA	128650818	128619968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128620594_128622163_128622410_128625533_128625654_128625873_128626013_128626732_128626833_128629950_128630144_128631947_128632158_128637798_128638106_128644918_128644984_128650539
transcript_102581.known	chr3	+	2185	6	FSM	ENSG00000075785.14	ENST00000265062.8	2185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_5	68.6684789404862	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCCTTTGCCAGAGTC	128703253	True	NA	13	True	AATAAA	-20	NA	128726182	128814798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806591_128807542_128807672_128813326
transcript_102582.known	chr3	+	1217	6	FSM	ENSG00000075785.14	ENST00000490093.6	1217	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	551.644958283859	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACAGTTAATCTGTGT	128703227	True	NA	-4	True	NA	NA	NA	128726156	128813791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128726360_128795359_128795421_128797942_128798070_128806371_128806616_128807554_128807672_128813326
transcript_102583.known	chr3	+	2475	19	FSM	ENSG00000177646.20	ENST00000680744.1	2475	19	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	72.7216917050507	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTACTGTTAGCCTTTGC	128875808	True	NA	15	True	TATAAA	-12	NA	128879653	128913102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128898430_128898507_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_102585.known	chr3	+	2431	18	FSM	ENSG00000177646.20	ENST00000511227.5	2431	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	51.7675132928553	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTGAGGTGGGTGGGGA	128875777	True	NA	-73	True	GGGGCT	-17	NA	128879622	128912927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128880018_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_102586.known	chr3	+	2445	18	FSM	ENSG00000177646.20	ENST00000308982.12	2445	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	20.3178888912342	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGCTGTACTTGTCAC	128875774	True	NA	27	True	TATAAA	-24	NA	128879619	128913114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128906120_128906250_128908184_128908265_128908972_128909100_128909343_128909422_128910020_128910150_128910740_128910814_128912506
transcript_102592.known	chr3	+	1703	12	FSM	ENSG00000177646.20	ENST00000681552.1	1703	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	69.2498172566733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTAAGAAACAGCTTGAAAG	128875777	True	NA	-9	True	NA	NA	NA	128879622	128912991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_128879842_128884652_128884747_128893554_128893657_128895309_128895417_128896435_128896537_128897631_128897711_128899286_128899462_128901275_128901350_128902552_128902629_128904061_128904133_128904385_128904506_128912506
transcript_102594.known	chr3	-	6034	8	FSM	ENSG00000114656.13	ENST00000265068.9	6034	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	4.77664385637157	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-128993829	True	NA	NA	False	NA	NA	NA	128994115	128966588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128993042_128993337_128993979
transcript_102596.known	chr3	-	1632	7	FSM	ENSG00000114656.13	ENST00000515659.1	1632	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.04611904907235	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGCTTTTAATAAATG	-128991883	False	NA	-39	True	ATTAAA	-25	NA	128991897	128970979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128988727_128988919_128991478
transcript_102598.nnic	chr3	-	1460	7	NIC	ENSG00000114656.13	novel	6034	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	5.70818126318124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTGCTTTTAATAAATG	-128993837	True	NA	-39	True	ATTAAA	-25	NA	128994123	128970979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_128971434_128975778_128975904_128976978_128977067_128978044_128978186_128987615_128987830_128993042_128993337_128993979
transcript_1026.nnic	chr1	+	793	3	NNC	ENSG00000286989.1	novel	1830	3	NA	NA	-139	52	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCACTTTTTCACCTAGAG	1600158	False	NA	7	True	ACTAAA	-17	NA	1600174	1602755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_1600235_1600656_1600707_1602072
transcript_10260.nic	chr1	+	1536	9	ISM	ENSG00000143379.13	ENST00000534805.5	2043	13	-50	5463	0	0	5prime_fragment	FALSE	canonical	3	49	junction_1	11.1460475057305	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	150923570	True	NA	NA	False	AATAAA	-22	NA	150926344	150945320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_10261.known	chr1	+	1478	9	FSM	ENSG00000143379.13	ENST00000368962.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	23.497007788227	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATGGTTTTGATTTAT	150923574	True	NA	NA	False	AATAAA	-22	NA	150926348	150945320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926464_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150942851_150943054_150943919_150943994_150944917
transcript_102612.nnic	chr3	-	936	3	NIC	ENSG00000114656.13	novel	6034	8	NA	NA	-8	44	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTAGTAAAGGGAATGAG	-128993837	True	NA	5	True	AATAAA	-27	NA	128994123	128970935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_128971434_128993042_128993337_128993979
transcript_102616.known	chr3	-	4230	4	FSM	ENSG00000172780.17	ENST00000393304.5	4230	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	67.8101926130742	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCCCAGGACTGGTTCT	-129121428	True	NA	-7	True	ATTAAA	-21	NA	129121804	129087568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129091347_129094985_129095170_129121285_129121493_129121743
transcript_102618.known	chr3	-	4478	3	FSM	ENSG00000172780.17	ENST00000315150.10	4478	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	9	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCGCCCAGGACTGGT	-129121428	True	NA	-10	True	ATTAAA	-18	NA	129121804	129087571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129091347_129094985_129095170_129121285
transcript_102619.known	chr3	+	565	1	FSM	ENSG00000273174.1	ENST00000608909.1	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCTTTTGGTGGTAAA	129123396	False	NA	NA	False	AATAAA	-18	NA	129123438	129124003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129123400_129124000
transcript_102620.known	chr3	-	335	1	FSM	ENSG00000273437.1	ENST00000609183.1	335	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGTTGCTGTTCAG	-129163927	False	NA	-21	True	AATAAA	-16	NA	129163940	129163605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129163600_129163900
transcript_102642.known	chr3	-	1549	5	FSM	ENSG00000169714.17	ENST00000504813.5	1549	5	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	2617.06194997367	3259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109150	True	NA	-21	True	AATAAA	-27	NA	129183922	129169568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171633_129171772_129183775
transcript_102643.known	chr3	-	1623	5	FSM	ENSG00000169714.17	ENST00000446936.6	1623	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2832.97595295124	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTGACAGTTTGGACTT	-129109127	True	NA	-9	True	ATTAAA	-21	NA	129183899	129169486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171654_129171772_129183775
transcript_102644.known	chr3	-	1516	5	FSM	ENSG00000169714.17	ENST00000500450.6	1516	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2715.1223153847	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTCTTTTTGTTTGTTT	-129109138	True	NA	-21	True	AATAAA	-27	NA	129183910	129169568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171278_129171445_129171509_129171654_129171772_129183775
transcript_102645.known	chr3	-	1040	5	FSM	ENSG00000169714.17	ENST00000441626.6	1040	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2738.93112135008	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTCTATGAACTTCCATA	-129109138	True	NA	NA	False	NA	NA	NA	129183910	129170101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129170571_129171078_129171284_129171445_129171539_129171633_129171772_129183775
transcript_102646.known	chr3	-	1030	1	FSM	ENSG00000286729.1	ENST00000652851.1	1030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACAGGGATAAGATGGT	NA	False	NA	NA	False	AATAAA	-13	NA	129278782	129277752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129277800_129278800
transcript_102647.known	chr3	+	3078	24	FSM	ENSG00000181789.14	ENST00000314797.10	3078	24	0	0	0	0	multi-exon	TRUE	canonical	2	379	junction_5	66.3488517784983	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCTACTTCTGCAGAC	129240789	True	NA	26	True	AATAAA	-20	NA	129249605	129277773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129249747_129250681_129250735_129252280_129252362_129252622_129252695_129252875_129252956_129254667_129254744_129254984_129255078_129256067_129256155_129257469_129257628_129257726_129257861_129260332_129260401_129260618_129260808_129263903_129264000_129265548_129265793_129267023_129267100_129267936_129268041_129268494_129268621_129268931_129269001_129271766_129271910_129272243_129272416_129272806_129272905_129274837_129274977_129275193_129275293_129277293
transcript_102648.known	chr3	+	2485	7	FSM	ENSG00000183624.14	ENST00000383463.9	2485	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	195.255743975832	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTTTGTTTTTCATTAT	129275392	True	NA	NA	False	AATAAA	-15	NA	129278869	129306186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_102654.nic	chr3	+	1661	7	NIC	ENSG00000183624.14	novel	1763	7	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	235.795815625864	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	129275430	True	NA	14	True	AATAAA	-25	NA	129278907	129305262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_129279044_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_102656.known	chr3	+	1952	7	FSM	ENSG00000183624.14	ENST00000502878.6	1952	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	209.512927206573	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTATTATGTTTCTTTT	129275478	True	NA	NA	False	GGGGCT	-35	NA	129278955	129305441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129279204_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_102658.known	chr3	+	1763	7	FSM	ENSG00000183624.14	ENST00000389735.7	1763	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.376267783357	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCCTGAATAAATTG	129275496	True	NA	14	True	AATAAA	-25	NA	129278973	129305262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129279212_129279709_129279916_129288853_129288998_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_10266.known	chr1	+	1045	8	FSM	ENSG00000143379.13	ENST00000368963.5	1045	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	27.1684090255501	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTCTTCTCTACAATTT	150923649	True	NA	NA	False	NA	NA	NA	150926423	150945110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150926518_150927703_150927975_150929966_150930119_150939939_150939975_150941328_150941429_150942562_150942689_150943919_150943994_150944917
transcript_102660.known	chr3	+	1490	6	FSM	ENSG00000183624.14	ENST00000417226.6	1490	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	231.095131926226	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGCCTACATTTTGGAA	129275368	True	NA	45	True	AATAAA	-15	NA	129278845	129305293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129278906_129279709_129279916_129288853_129288998_129298353_129298536_129301949_129302143_129304588
transcript_102662.known	chr3	+	948	6	FSM	ENSG00000183624.14	ENST00000509042.5	948	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	207.417453460407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACTCCTAGAGCAATGG	129275350	True	NA	NA	False	NA	NA	NA	129278827	129304751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129278906_129279709_129279916_129290678_129290805_129298353_129298536_129301949_129302143_129304588
transcript_102685.nic	chr3	-	676	3	ISM	ENSG00000251474.7	ENST00000510078.5	2161	5	-69	13391	-35	-95	5prime_fragment	FALSE	canonical	2	19	junction_1	1.5	407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCAGAAAGC	NA	False	NA	NA	False	NA	NA	NA	129399474	129396312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_129396421_129397039_129397141_129399007
transcript_102687.known	chr3	+	3569	27	FSM	ENSG00000163913.14	ENST00000349441.6	3569	27	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_19	23.4606557210984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTCTTGCCCAGATGA	129440007	True	NA	18	True	AATAAA	-18	NA	129440243	129520351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129440372_129449870_129449938_129451913_129451999_129463559_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129492140_129492195_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_102690.known	chr3	-	2470	8	FSM	ENSG00000129071.10	ENST00000249910.5	2470	8	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	74.6532118586757	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGATTCCTCTGGCAT	-129434910	True	NA	NA	False	AATAAA	-23	NA	129440009	129430949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_102692.known	chr3	-	2099	8	FSM	ENSG00000129071.10	ENST00000503197.5	2099	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	106.566832532071	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGCTTTTCCAATGATGA	-129434908	True	NA	0	True	AATAAA	-29	NA	129440007	129431265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129431579_129432555_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_1027.nic	chr1	+	566	3	NIC	ENSG00000197530.13	novel	592	6	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	3.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	NA	False	NA	17	True	AATAAA	-27	NA	1615420	1617323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_1615634_1616507_1616615_1617077
transcript_102702.known	chr3	-	1684	7	FSM	ENSG00000129071.10	ENST00000393278.6	1684	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	116.124454310403	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATAAGATTCCTCTGGC	-129440154	False	NA	NA	False	AATAAA	-21	NA	129440179	129430951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129431579_129432502_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129437807_129437951_129439729
transcript_102706.known	chr3	-	2194	7	FSM	ENSG00000129071.10	ENST00000507208.1	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	80.6322240518985	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCAGGAAGGTTTGGGC	-129434936	True	NA	NA	False	NA	NA	NA	129440035	129432175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129432607_129433097_129433248_129433849_129433985_129434061_129434137_129436442_129437309_129437719_129437951_129439729
transcript_102712.known	chr3	+	3541	26	NNC	ENSG00000163913.14	novel	3650	26	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	30.8268973463111	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGCCCAGATGAAGTT	129440163	False	NA	22	True	AATAAA	-22	NA	129440236	129520355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_129440372_129449870_129449938_129451913_129451999_129463544_129463627_129464634_129464782_129469341_129469418_129476314_129476507_129476662_129476802_129478015_129478219_129479784_129479923_129481529_129481695_129483484_129483683_129488256_129488398_129495445_129495608_129499901_129500069_129502710_129502883_129504318_129504422_129506408_129506550_129507664_129507763_129512311_129512413_129514388_129514555_129515487_129515600_129517468_129517595_129519106_129519187_129519567_129519733_129520175
transcript_102713.known	chr3	-	6303	7	FSM	ENSG00000172765.18	ENST00000393238.8	6303	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.7356333046425	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGGTCAGACTCATGT	-129893538	True	NA	-12	True	AATAAA	-16	NA	129893711	129647791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129651796_129654967_129655104_129670329_129671265_129827802_129828509_129832773_129832827_129880308_129880560_129893493
transcript_102715.nnic	chr3	-	1729	3	Fusion	ENSG00000172765.18_ENSG00000203644.3	novel	557	4	NA	NA	-5	-5	multi-exon	FALSE	canonical	3	15	junction_1	10	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAGACAGCATTCTTTTT	-129893598	False	NA	-4	True	AATAAA	-16	NA	129893611	129847052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_-_129848413_129880308_129880560_129893493
transcript_102716.known	chr3	-	910	1	FSM	ENSG00000203644.3	ENST00000366451.3	910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGCATTCTTTTTTCAAA	NA	False	NA	1	True	AATAAA	-21	NA	129847957	129847047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_129847000_129848000
transcript_102719.known	chr3	+	3556	3	FSM	ENSG00000271270.8	ENST00000605830.6	3556	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	4.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAGCAAAAGTTCTACTTT	129893800	False	NA	NA	False	AATAAA	-19	NA	129893810	129908911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129893928_129901706_129901861_129905626
transcript_10272.nic	chr1	+	934	3	ISM	ENSG00000143379.13	ENST00000368963.5	1045	8	-79	14654	0	0	5prime_fragment	FALSE	canonical	3	49	junction_1	19	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAACCGCATTAAAC	150923570	True	NA	NA	False	TATAAA	-33	NA	150926344	150930456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_150926518_150927703_150927975_150929966
transcript_102721.known	chr3	+	2787	3	FSM	ENSG00000271270.8	ENST00000671446.1	2787	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGCTTTTTTTTTTTT	129893718	True	NA	NA	False	NA	NA	NA	129893874	129908002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129894132_129901706_129901861_129905626
transcript_102722.known	chr3	+	1560	3	FSM	ENSG00000170893.4	ENST00000302649.4	1560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGGAGCTCTGTGGTTGC	129974708	True	NA	NA	False	AATAAA	-17	NA	129974719	129977935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_129974824_129975808_129976028_129976698
transcript_102727.nnic	chr3	-	1156	5	NNC	ENSG00000248243.1	novel	713	4	NA	NA	23	570	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.08972473588517	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	NA	False	NA	NA	False	AATAAA	-36	NA	130094281	130088862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_130089256_130089359_130089479_130090701_130091121_130091776_130091868_130094147
transcript_102730.nnic	chr3	+	946	4	NNC	ENSG00000251287.8	novel	969	8	NA	NA	436	630	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.77123616632825	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTCTGATTTATGG	130094308	True	NA	NA	False	AAGAAA	-22	NA	130094341	130099020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_130094514_130097174_130097251_130098222_130098746_130098845
transcript_102731.known	chr3	+	1420	4	FSM	ENSG00000249846.7	ENST00000665912.1	1420	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTCACTGTCATTACCA	130111633	True	NA	NA	False	AATAAA	-16	NA	130111668	130156175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130111813_130150380_130150485_130153323_130153584_130155263
transcript_102735.nnic	chr3	-	1055	4	NNC	ENSG00000248243.1	novel	713	4	NA	NA	33	570	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	-130094255	True	NA	NA	False	AATAAA	-36	NA	130094271	130088862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_130089256_130089359_130089479_130090701_130091121_130094147
transcript_102736.known	chr3	+	1466	2	FSM	ENSG00000249846.7	ENST00000658712.1	1466	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCCTGGTATATAGTAAG	130112356	True	NA	13	True	AATACA	-16	NA	130112524	130120566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130112745_130119320
transcript_102738.known	chr3	-	5016	20	FSM	ENSG00000196455.8	ENST00000356763.8	5016	20	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_16	29.3595534622273	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCATCCTAAGAGTTT	-130739048	True	NA	-12	True	ATTAAA	-28	NA	130746829	130678933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_130679486_130680612_130680722_130680976_130681066_130681490_130681592_130684249_130684382_130686210_130686423_130690489_130690655_130703722_130703889_130705560_130705772_130706947_130707136_130708290_130708493_130716395_130716600_130718388_130718535_130723413_130723588_130728462_130728685_130730307_130730443_130733547_130734131_130735868_130736003_130744485_130745265_130746317
transcript_102740.known	chr3	+	4994	28	FSM	ENSG00000017260.20	ENST00000510168.6	4994	28	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	83.2847430355439	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130892942	False	NA	17	True	AATAAA	-19	NA	130894083	131003150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894338_130894589_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_102742.known	chr3	+	3439	28	FSM	ENSG00000017260.20	ENST00000513801.5	3439	28	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_27	122.529960502934	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAAGCTGTGGTGCATT	130894093	True	NA	37	True	ATTAAA	-34	NA	130894177	131016712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
transcript_102744.known	chr3	+	3386	28	FSM	ENSG00000017260.20	ENST00000422190.6	3386	28	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_27	106.680567509856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTACTGTTCTCTTT	130894589	False	NA	9	True	ATTAAA	-6	NA	130894640	131016684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219_131001315_131016151
transcript_102746.known	chr3	+	4714	27	FSM	ENSG00000017260.20	ENST00000504948.5	4714	27	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	88.0419144397988	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130894093	True	NA	17	True	AATAAA	-19	NA	130894177	131003150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894338_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_102747.known	chr3	+	4795	27	FSM	ENSG00000017260.20	ENST00000428331.6	4795	27	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	61.0228519616911	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATCCCAGTGGGGACTA	130894512	False	NA	17	True	AATAAA	-19	NA	130894534	131003150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_130894776_130930415_130930527_130932021_130932139_130934621_130934712_130937427_130937464_130940629_130940692_130941590_130941700_130953820_130953977_130955011_130955081_130956103_130956180_130959274_130959342_130963970_130964096_130964947_130965046_130967144_130967241_130967329_130967420_130969291_130969397_130975331_130975489_130979248_130979420_130980581_130980680_130992950_130993002_130993931_130994099_130996042_130996112_130996679_130996797_130997605_130997754_130998293_130998390_130999517_130999660_131001219
transcript_10275.known	chr1	+	623	2	FSM	ENSG00000143379.13	ENST00000481219.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCGCAACCGCATTAAAC	150927807	True	NA	NA	False	TATAAA	-33	NA	150927841	150930456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150927975_150929966
transcript_102758.known	chr3	-	2687	6	FSM	ENSG00000034533.12	ENST00000264992.8	2687	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.6616250863505	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGTATTTCTAAATAT	-131026543	True	NA	-5	True	AATAAA	-19	NA	131026825	131013874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131014388_131016143_131016340_131018505_131018717_131024004_131025332_131025473_131025595_131026506
transcript_102761.known	chr3	-	589	3	FSM	ENSG00000034533.12	ENST00000509060.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	25.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTTGTGGAAGATCATAG	-131026327	False	NA	NA	False	NA	NA	NA	131026609	131025285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131025332_131025473_131025595_131026187
transcript_102762.nic	chr3	-	1112	3	ISM	ENSG00000034533.12	ENST00000507978.5	2669	7	33	10674	4	502	5prime_fragment	FALSE	canonical	3	28	junction_2	15	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCGGTGCTATGTGGAAA	-131026539	True	NA	-1	True	AATAAA	-16	NA	131026821	131024655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_131025332_131025473_131025595_131026506
transcript_102766.known	chr3	+	2208	3	FSM	ENSG00000246082.3	ENST00000499077.3	2243	3	35	0	-32	0	multi-exon	FALSE	canonical	3	95	junction_1	19.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGGACCATATAGTAGT	131360949	True	NA	2	True	AATAAA	-16	NA	131361897	131365122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131362069_131362171_131362442_131363355
transcript_102767.known	chr3	+	1706	2	FSM	ENSG00000246082.3	ENST00000498923.3	1773	2	67	0	-18	0	multi-exon	FALSE	canonical	3	134	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGCTTTCAAATATGTAT	131360963	True	NA	31	True	AATAAA	-28	NA	131361911	131364531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131362442_131363355
transcript_102768.known	chr3	-	1801	3	FSM	ENSG00000250608.2	ENST00000668739.1	1801	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCAACACACATGCTTTT	-131361521	True	NA	NA	False	NA	NA	NA	131361680	131325144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131326277_131327176_131327731_131361565
transcript_102769.known	chr3	-	2954	2	FSM	ENSG00000250608.2	ENST00000660567.1	2954	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCAGGCGGATCATGAG	NA	False	NA	NA	False	NA	NA	NA	131381656	131374128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131376708_131381281
transcript_102770.known	chr3	+	6108	3	FSM	ENSG00000198585.12	ENST00000521288.2	6108	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	17	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCAGGTTCTCACTTAT	131380092	True	NA	38	True	AATAAA	-40	NA	131381773	131388830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131381943_131382045_131382316_131383161
transcript_102772.known	chr3	+	1552	2	FSM	ENSG00000198585.12	ENST00000502852.1	1552	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATACATGATACCAGATGA	131380103	True	NA	-10	True	NA	NA	NA	131381784	131383439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131381943_131382045
transcript_102775.known	chr3	-	1457	11	FSM	ENSG00000114686.9	ENST00000425847.6	1457	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	524.267689258074	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAATTACCACATTAAA	-131476446	True	NA	-49	True	ATTAAA	-8	NA	131502983	131462555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131501843_131501925_131502729
transcript_10278.known	chr1	+	1551	14	FSM	ENSG00000143412.10	ENST00000368947.9	1551	14	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_6	4.0265391779392	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCGCTGTTGTTTGTGTTC	150982233	True	NA	7	True	NA	NA	NA	150982291	150995634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150982380_150982486_150982584_150983089_150983181_150983337_150983435_150983974_150984070_150984280_150984395_150984585_150984677_150986335_150986416_150986601_150986662_150987871_150987957_150988090_150988187_150988282_150988342_150994576_150994700_150995259
transcript_102792.known	chr3	+	883	4	FSM	ENSG00000248468.2	ENST00000663361.1	883	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTAGTGTCTCGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	131502891	131520877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131503085_131508780_131508902_131517833_131517910_131520384
transcript_102793.known	chr3	+	732	3	FSM	ENSG00000248468.2	ENST00000669677.1	732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTAGTGTCTCGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	131502839	131520877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131503003_131517833_131517910_131520384
transcript_102794.known	chr3	-	1708	10	FSM	ENSG00000114686.9	ENST00000264995.8	1708	10	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_6	101.852592589899	4990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTGTTTACATTTTTGT	-131476434	True	NA	-18	True	AATAAA	-14	NA	131502971	131462211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502729
transcript_102795.known	chr3	-	1377	10	FSM	ENSG00000114686.9	ENST00000511168.5	1377	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	422.012140718227	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTATCTTAAGATGTCT	-131476446	True	NA	-66	True	NA	NA	NA	131502983	131462435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131462876_131468090_131468169_131469695_131469774_131471170_131471280_131487679_131487741_131489980_131490081_131498178_131498278_131500429_131500522_131501530_131501716_131502848
transcript_102796.known	chr3	-	813	4	FSM	ENSG00000114686.9	ENST00000510923.5	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_1	34.1857670188438	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTATCTGGAACAAGTAAT	-131476430	True	NA	NA	False	NA	NA	NA	131502967	131497979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131498278_131500429_131500522_131501530_131501716_131502729
transcript_102797.known	chr3	-	659	5	FSM	ENSG00000114686.9	ENST00000512877.1	659	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	594.613897836235	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGGTCCTCATAGCGAGT	-131476414	True	NA	NA	False	NA	NA	NA	131502951	131487680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131487741_131489980_131490081_131500429_131500522_131501530_131501716_131502729
transcript_102798.known	chr3	+	701	3	FSM	ENSG00000248468.2	ENST00000661875.1	701	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTAGTGTCTCGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	131502572	131520877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131502705_131517833_131517910_131520384
transcript_102799.known	chr3	+	807	4	FSM	ENSG00000248468.2	ENST00000655300.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTAGTGTCTCGTGTT	NA	False	NA	NA	False	AATAAA	-32	NA	131502587	131520877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_131502705_131508780_131508902_131517833_131517910_131520384
transcript_1028.nnic	chr1	+	689	3	NNC	ENSG00000197530.13	novel	2821	2	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	NA	False	NA	17	True	AATAAA	-27	NA	1615420	1617323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_1615634_1616507_1616738_1617077
transcript_102800.known	chr3	-	3749	16	FSM	ENSG00000196353.13	ENST00000429747.6	3749	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	2.37954243967663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTAAGAGTTGTGGTC	-132034680	True	NA	NA	False	AATAAA	-17	NA	132035014	131533568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131535330_131542556_131542794_131549946_131550081_131552439_131552492_131555496_131555552_131564215_131564350_131575070_131575131_131581578_131581666_131587483_131587583_131669674_131669765_131685874_131685959_131696541_131696617_131699908_131699981_131723445_131723626_131905263_131905445_132034566
transcript_102802.known	chr3	-	1958	14	FSM	ENSG00000196353.13	ENST00000515418.1	1958	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	2.24794449172346	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAGAAAAACCCAC	NA	False	NA	-20	True	TTTAAA	-37	NA	131723631	131534736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_131535330_131542556_131542794_131549946_131550081_131552439_131552492_131555496_131555552_131564215_131564350_131575070_131575131_131581578_131581666_131587483_131587583_131669674_131669765_131685874_131685959_131696541_131696617_131699908_131699981_131723445
transcript_102803.known	chr3	+	1783	11	FSM	ENSG00000014257.16	ENST00000351273.11	1783	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	3.36005952328229	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGTAGGTTTAATACACA	132317341	True	NA	6	True	AATAAA	-16	NA	132317406	132368298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132317577_132328266_132328363_132331646_132331734_132332191_132332345_132337455_132337555_132342551_132342645_132344926_132345060_132349919_132350003_132352719_132352824_132356685_132356856_132367703
transcript_102808.nnic	chr3	+	645	3	Intergenic	novelGene_44	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	10	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAGAGGCATTAAACA	NA	False	NA	NA	False	ATTAAA	-20	NA	132376780	132391049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_132376922_132377313_132377363_132390594
transcript_102811.nnic	chr3	+	880	3	Intergenic	novelGene_45	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	7	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTAAGAGGCATTAAACA	NA	False	NA	NA	False	ATTAAA	-20	NA	132376796	132391049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_132377007_132377147_132377363_132390594
transcript_102816.known	chr3	+	7754	56	FSM	ENSG00000138246.17	ENST00000260818.11	7754	56	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_4	19.695399471211	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTGTTCTAGTTTAAT	132416272	True	NA	30	True	AATAAA	-27	NA	132417501	132539032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_132417761_132434537_132434619_132446474_132446551_132447320_132447471_132447897_132447940_132450646_132450848_132453297_132453505_132453598_132453695_132454065_132454158_132456234_132456402_132456500_132456581_132456662_132456833_132457268_132457369_132460249_132460358_132461049_132461206_132462466_132462524_132463695_132463818_132465994_132466071_132466298_132466395_132467169_132467314_132473144_132473228_132474931_132475086_132477788_132477893_132477980_132478141_132479226_132479290_132480368_132480471_132482225_132482331_132483374_132483578_132484587_132484673_132488297_132488453_132488975_132489022_132490896_132491052_132492413_132492616_132494143_132494260_132495087_132495167_132496527_132496664_132499125_132499311_132499733_132499809_132500793_132500914_132502288_132502469_132503213_132503382_132505301_132505416_132507236_132507354_132511066_132511245_132513007_132513100_132514570_132514671_132516421_132516497_132516703_132516817_132522827_132522998_132523156_132523200_132523539_132523714_132525609_132525790_132526140_132526282_132528188_132528333_132530997_132531098_132538175
transcript_102819.known	chr3	-	3231	20	FSM	ENSG00000240303.8	ENST00000264990.11	3231	20	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_14	33.8830480008552	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	-132659113	True	NA	-9	True	ATTAAA	-19	NA	132659809	132558140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644897_132659602
transcript_10282.known	chr1	-	2400	10	FSM	ENSG00000143409.17	ENST00000312210.9	2400	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	8.3813431847316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTTTCCTGAGATCTGT	-151006293	True	NA	NA	False	NA	NA	NA	151006857	150996548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002324_151006311
transcript_102824.nnic	chr3	-	2203	13	NNC	ENSG00000240303.8	novel	3231	20	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_12	45.8374998106233	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTTGTAATTTGTTTCT	NA	False	NA	-9	True	ATTAAA	-19	NA	132627161	132558140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132578882_132579491_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132627061
transcript_102829.nnic	chr3	-	773	7	NNC	ENSG00000240303.8	novel	1891	11	NA	NA	-87	-18727	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	78.4405294899688	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAAGACTACTCTGGTC	NA	False	NA	-8	True	ATTAAA	-20	NA	132627161	132597905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_132598028_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132626690_132626818_132627061
transcript_10283.known	chr1	-	2623	10	FSM	ENSG00000143409.17	ENST00000683666.2	2542	10	0	-81	0	81	multi-exon	FALSE	canonical	2	5	junction_9	6.99205898780101	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCCAAAAAGGTGAAACCC	-151006338	False	NA	65	True	NA	NA	NA	151006902	150996753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150997368_150997623_150997780_150998081_150998274_150999368_150999512_150999861_150999965_151000456_151000616_151001249_151001315_151001724_151001783_151002164_151002707_151006311
transcript_102833.known	chr3	-	7784	45	FSM	ENSG00000274810.4	ENST00000471702.2	7784	45	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	67.793241209718	336	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATTTTGTAATTTGTTTC	-132720977	True	NA	-10	True	ATTAAA	-18	NA	132722459	132558141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_132559086_132559832_132559943_132561100_132561218_132575771_132575927_132576943_132577016_132578795_132579559_132603228_132603328_132605097_132605206_132618633_132618773_132619467_132619546_132621131_132621293_132626690_132626818_132628339_132628447_132630436_132630559_132631340_132631480_132639491_132639657_132641971_132642134_132642676_132642803_132644796_132644892_132681913_132682091_132682702_132682819_132683398_132683525_132684553_132684795_132686259_132686388_132687150_132687227_132688649_132688892_132689073_132689264_132690527_132690651_132691191_132691287_132692653_132692819_132694826_132694966_132696730_132696814_132697259_132697363_132699917_132700062_132700333_132700449_132701429_132701534_132704197_132704372_132705739_132705815_132708100_132708258_132713125_132713287_132715084_132715219_132716756_132716910_132718993_132719145_132719704_132719831_132721962
transcript_102842.known	chr3	+	3727	6	FSM	ENSG00000144868.14	ENST00000321871.11	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	29.2779780722645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGCTAATACATTTT	133036711	True	NA	NA	False	AATAAA	-22	NA	133038390	133397775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133038436_133045901_133046021_133229265_133229352_133379751_133381162_133390179_133390335_133395863
transcript_102843.known	chr3	+	2165	6	FSM	ENSG00000144868.14	ENST00000393130.7	2165	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	35.5494022453262	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	133036722	True	NA	NA	False	AATAAA	-31	NA	133038401	133396228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133038436_133045901_133046021_133229269_133229352_133379751_133381162_133390179_133390335_133395863
transcript_102846.nic	chr3	+	839	5	NIC	ENSG00000144868.14	novel	3727	6	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	57.1707967409936	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	133036642	True	NA	NA	False	AATAAA	-31	NA	133038321	133396228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_133038436_133045901_133046021_133229265_133229352_133390179_133390335_133395863
transcript_102847.nic	chr3	+	835	5	NIC	ENSG00000144868.14	novel	2165	6	NA	NA	-69	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	59.4994747875979	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCTCTTAATAACTATT	133036642	True	NA	NA	False	AATAAA	-31	NA	133038321	133396228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_133038436_133045901_133046021_133229269_133229352_133390179_133390335_133395863
transcript_102848.known	chr3	+	555	4	FSM	ENSG00000144868.14	ENST00000514529.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.7539922236252	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTCATTTAAAAATAAATC	133036711	True	NA	NA	False	TATAAA	-1	NA	133038390	133119384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133038436_133045901_133046021_133074314_133074359_133119037
transcript_102849.known	chr3	+	955	5	FSM	ENSG00000091527.17	ENST00000431519.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_4	149.456306323955	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCAGTGATTCACCAC	133572318	False	NA	87	True	NA	NA	NA	133573975	133587418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587158
transcript_102850.known	chr3	+	3351	5	FSM	ENSG00000091527.17	ENST00000264993.8	3351	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	121.526746027366	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGACTGTAATGGTTAT	133565203	True	NA	14	True	AATAAA	-16	NA	133573685	133590261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574285_133575038_133575116_133584001_133584151_133586562_133586723_133587895
transcript_102851.known	chr3	+	3621	5	FSM	ENSG00000091527.17	ENST00000420115.6	3621	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	251.25584570314	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGACTGTAATGGTTA	133574370	True	NA	13	True	AATAAA	-15	NA	133574456	133590260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_133574593_133575038_133575116_133584001_133584151_133586562_133586723_133587161
transcript_102855.known	chr3	-	5596	8	FSM	ENSG00000154917.11	ENST00000285208.9	5596	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.84919816723071	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTTGTCTGTGTTTAAG	-133895867	False	NA	NA	False	AATAAA	-23	NA	133895882	133824234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_102859.known	chr3	-	5219	9	FSM	ENSG00000154917.11	ENST00000543906.5	5219	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	7.9912061042123	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAAAGCTTCTTGTCTG	-133895580	False	NA	NA	False	AATAAA	-15	NA	133895595	133824242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_133827346_133827427_133828853_133834574_133834642_133838165_133838260_133839505_133839618_133841284_133841391_133841609_133841664_133864583_133864643_133895396
transcript_10286.known	chr1	+	3025	8	FSM	ENSG00000143363.17	ENST00000271620.8	3025	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	48.5768904492073	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005185	True	NA	13	True	ATTAAA	-16	NA	151008448	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_102860.known	chr3	+	294	2	FSM	ENSG00000240006.1	ENST00000482019.1	294	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTGCATTCATATTTA	134313413	True	NA	NA	False	ATTAAA	-18	NA	134313575	134321171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134313618_134320919
transcript_102861.known	chr3	-	4868	10	FSM	ENSG00000114019.15	ENST00000249883.10	4868	10	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	31.1376870617513	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGCTTGTTCTTGTATC	-134368124	True	NA	-3	True	ATTAAA	-15	NA	134374447	134355346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134357764_134358539_134358720_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
transcript_102862.known	chr3	-	4335	10	FSM	ENSG00000114019.15	ENST00000422605.6	4335	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	60.5373061186139	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCTTTGCACAGGTG	-134368124	True	NA	-19	True	ATTAAA	-16	NA	134374447	134355876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134357764_134358539_134358717_134359282_134359504_134360105_134360414_134361511_134361808_134365816_134365910_134366282_134366428_134367496_134367804_134370699_134371495_134374341
transcript_102864.known	chr3	+	5511	14	FSM	ENSG00000182923.20	ENST00000682458.1	5511	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_13	70.8393465367339	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134485268	True	NA	NA	False	ATTAAA	-17	NA	134486036	134565031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134558141_134558348_134559149_134559430_134561376
transcript_102868.known	chr3	+	2182	13	FSM	ENSG00000182923.20	ENST00000684217.1	2182	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	50.035751107472	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTCTCATACGAATAT	134485482	False	NA	5	True	AATAAA	-14	NA	134485753	134561767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_102870.known	chr3	+	2022	13	FSM	ENSG00000182923.20	ENST00000684574.1	2022	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_12	58.0920605590816	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAATATTGTAAAGAAAAT	134485449	True	NA	-18	True	NA	NA	NA	134485720	134574990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_102873.known	chr3	+	5293	13	FSM	ENSG00000182923.20	ENST00000383229.8	5293	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	52.1229849064264	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGTTAGTGTCTTAACA	134485288	True	NA	NA	False	ATTAAA	-17	NA	134486056	134565031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_102875.known	chr3	+	1740	13	FSM	ENSG00000182923.20	ENST00000514678.2	1740	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_12	59.7285526360718	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTATTTTGCCAAAGCTTC	134485407	False	NA	5	True	AATAAA	-19	NA	134486175	134575013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134547334_134547473_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_102878.known	chr3	+	5045	12	FSM	ENSG00000182923.20	ENST00000682593.1	5045	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	54.2951834157392	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134485732	False	NA	NA	False	ATTAAA	-8	NA	134486003	134565022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_10288.nic	chr1	+	2986	8	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	3	25	junction_2	60.4523762636207	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005134	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151018556_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_102880.known	chr3	+	1835	12	FSM	ENSG00000182923.20	ENST00000354446.7	1835	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_11	49.9727198306509	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACTATTTTGCCAAAGCT	134485519	False	NA	3	True	AATAAA	-17	NA	134485790	134575011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486053_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_102882.known	chr3	+	5033	12	FSM	ENSG00000182923.20	ENST00000682689.1	5033	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	58.7231915272024	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134486112	True	NA	NA	False	ATTAAA	-8	NA	134486182	134565022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545572_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_102884.known	chr3	+	1655	12	FSM	ENSG00000182923.20	ENST00000508778.2	1655	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	63.9921224490733	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	134485341	False	NA	-4	True	AATAAA	-10	NA	134486109	134575004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_102887.known	chr3	+	5095	12	FSM	ENSG00000182923.20	ENST00000684492.1	5095	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	60.7517642501362	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAAATCTGAGTTAGT	134486412	False	NA	NA	False	ATTAAA	-8	NA	134486457	134565022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486557_134495295_134495361_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_102888.known	chr3	+	1912	12	FSM	ENSG00000182923.20	ENST00000512894.6	1912	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.2440043415715	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATTAACACTATTTTGC	134486154	True	NA	-4	True	AATAAA	-10	NA	134486210	134575004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486557_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134574792
transcript_10289.nic	chr1	+	2917	7	NIC	ENSG00000143363.17	novel	3025	8	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_6	63.2624603448909	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005134	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151018466_151018670_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_102894.known	chr3	+	7253	12	FSM	ENSG00000182923.20	ENST00000682042.1	7253	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	39.7797656110002	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCATGGATGAACCTTGA	134485276	True	NA	NA	False	AAAAAG	-31	NA	134486044	134567117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_134486203_134495295_134495365_134507108_134507287_134531844_134531941_134532777_134532901_134537154_134537269_134545585_134545820_134546148_134546289_134549061_134549177_134550062_134550261_134551925_134552013_134561376
transcript_1029.known	chr1	+	486	3	FSM	ENSG00000197530.13	ENST00000463492.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	22.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGATTTGGTTTCTATGGC	1614593	False	NA	17	True	AATAAA	-27	NA	1615967	1617323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1616101_1616507_1616615_1617077
transcript_102900.nnic	chr3	-	468	4	NNC	ENSG00000129055.13	novel	1840	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	213.851973726376	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134486006	False	NA	-2	True	ACTAAA	-19	NA	134486023	134477705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_134477796_134478535_134478716_134482805_134482932_134485951
transcript_102901.known	chr3	-	1840	3	FSM	ENSG00000129055.13	ENST00000510994.5	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	200.5	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134486006	False	NA	-2	True	ACTAAA	-19	NA	134486023	134477705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134485319
transcript_102902.known	chr3	-	1420	3	FSM	ENSG00000129055.13	ENST00000514612.5	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	259.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTATGCTGGGTCTTTT	-134483649	True	NA	-7	True	ACTAAA	-14	NA	134485989	134477710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134485700
transcript_102903.known	chr3	-	1170	3	FSM	ENSG00000129055.13	ENST00000354910.10	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	118	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGCTGGGTCTTTTTGTTT	-134483645	True	NA	-2	True	ACTAAA	-19	NA	134485985	134477705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134485951
transcript_102905.known	chr3	-	896	3	FSM	ENSG00000129055.13	ENST00000511751.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	263	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGGATAAATTTACAGA	NA	False	NA	NA	False	NA	NA	NA	134486716	134478075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_134478716_134482805_134482932_134486586
transcript_10291.known	chr1	+	2788	7	FSM	ENSG00000143363.17	ENST00000368936.5	2788	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	53.8392669588532	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005219	True	NA	13	True	ATTAAA	-16	NA	151008482	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_102915.known	chr3	-	1961	5	FSM	ENSG00000240086.7	ENST00000657055.1	1961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.753520777581	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCTGCTTTGAACATTTA	-135439178	True	NA	-25	True	AATAGA	-38	NA	135439862	135354811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356322_135357271_135357383_135379261_135379428_135379780_135379848_135439755
transcript_102926.nnic	chr3	-	838	4	NNC	ENSG00000240086.7	novel	1704	3	NA	NA	10	-25322	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16.9705627484771	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTTGAGTATGTCTT	NA	False	NA	NA	False	ATTAAA	-20	NA	135439878	135232729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_135233212_135379261_135379428_135379780_135379848_135439755
transcript_102927.known	chr3	-	1974	4	FSM	ENSG00000240086.7	ENST00000653803.1	1974	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.9705627484771	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGTGTTTTCATTGAG	-135439180	True	NA	2	True	AATAAA	-25	NA	135439864	135354784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356417_135379261_135379428_135379780_135379848_135439755
transcript_102928.known	chr3	-	1868	4	FSM	ENSG00000240086.7	ENST00000466206.6	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	11.3137084989848	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATAAGTCTCTGTG	-135439180	True	NA	-9	True	AATAAA	-14	NA	135439864	135354795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356322_135379261_135379428_135379780_135379848_135439755
transcript_102929.known	chr3	-	1735	4	FSM	ENSG00000240086.7	ENST00000653585.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.9705627484771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACTCATCTGTGAATAGA	-135439183	True	NA	-82	True	NA	NA	NA	135439867	135354868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135356322_135379324_135379428_135379780_135379848_135439755
transcript_10293.known	chr1	+	916	6	FSM	ENSG00000143363.17	ENST00000475722.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	68.3918123754591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAGATCCCTTCAGGAC	151005203	True	NA	NA	False	AAGAAA	-45	NA	151008466	151033966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151018466_151018670_151027232_151027328_151028785_151028945_151033805
transcript_102932.known	chr3	-	867	4	FSM	ENSG00000240086.7	ENST00000459861.6	867	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	15.556349186104	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTCTTAAACACTTAAG	-135439178	True	NA	NA	False	AATAAA	-16	NA	135439862	135373794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_135374322_135379261_135379428_135379780_135379848_135439755
transcript_10294.known	chr1	+	732	6	FSM	ENSG00000143363.17	ENST00000462440.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	76.3947642184986	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAAGTACCCACCCTA	151005186	True	NA	NA	False	NA	NA	NA	151008449	151033855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151018556_151018670_151027232_151027328_151028785_151028945_151033805
transcript_102940.known	chr3	+	6743	14	FSM	ENSG00000073711.11	ENST00000264977.8	6743	14	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	8.24190476060238	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTCATTAAGGTAATT	135964251	True	NA	10	True	AATAAA	-16	NA	135965727	136147894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_135965850_136001058_136003494_136026831_136027099_136040858_136040963_136049258_136049362_136070477_136070553_136078366_136078454_136082264_136082422_136087882_136087932_136090577_136090668_136102006_136102183_136103257_136103377_136106215_136106323_136145042
transcript_102941.known	chr3	-	6062	34	FSM	ENSG00000118007.13	ENST00000383202.7	6062	34	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_21	11.8496085648639	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTGTGGTAGTCATCCTA	-136749069	True	NA	-2	True	AATAAA	-14	NA	136752378	136336235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136338278_136338369_136338451_136340490_136340606_136341440_136341552_136343831_136344007_136349157_136349364_136357719_136357849_136359147_136359297_136363365_136363468_136366942_136367083_136369107_136369283_136377659_136377753_136398748_136398830_136417884_136417973_136421092_136421164_136422409_136422614_136422767_136422858_136422951_136423045_136433555_136433660_136443286_136443405_136452032_136452148_136464880_136464989_136472412_136472493_136473538_136473638_136477288_136477413_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_102942.nnic	chr3	-	1534	10	NNC	ENSG00000118007.13	novel	1227	6	NA	NA	0	62	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.3965560102448	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGTTATCCTCCATT	-136749069	True	NA	NA	False	AATAAA	-15	NA	136752378	136499703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_136500069_136500222_136500297_136502627_136502780_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_102943.known	chr3	-	1304	8	FSM	ENSG00000118007.13	ENST00000480733.1	1304	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	30.5794382030855	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTCTTTATGTCTGTT	-136749057	True	NA	NA	False	ATTAAA	-18	NA	136752366	136518042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136518416_136521212_136521418_136542118_136542196_136568764_136568862_136604308_136604474_136623145_136623249_136630869_136630982_136752194
transcript_102945.nic	chr3	-	545	3	ISM	ENSG00000118007.13	ENST00000480733.1	1304	8	-181	105126	-144	-105126	5prime_fragment	FALSE	canonical	3	82	junction_1	14.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTCGTCCTGGCCGGCCT	NA	False	NA	NA	False	AAAAAG	-6	NA	136752547	136623168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_136623249_136630869_136630982_136752194
transcript_10295.nic	chr1	+	2714	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	71.4713928785497	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005134	True	NA	13	True	ATTAAA	-16	NA	151008397	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151024610_151024796_151025514_151025674_151027232_151027328_151033805
transcript_102955.known	chr3	+	1799	15	FSM	ENSG00000114054.14	ENST00000251654.9	1799	15	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_3	65.7951365983839	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247658	True	NA	17	True	ATTAAA	-14	NA	136250339	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_102956.known	chr3	+	1715	14	FSM	ENSG00000114054.14	ENST00000462637.5	1715	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	175.435451471862	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_102957.known	chr3	+	1844	16	FSM	ENSG00000114054.14	ENST00000466072.5	1844	16	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	214.675217221012	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326325_136326386_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_102958.known	chr3	+	1613	13	FSM	ENSG00000114054.14	ENST00000490504.5	1613	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	184.996771743605	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_102959.known	chr3	+	1877	16	FSM	ENSG00000114054.14	ENST00000468777.5	1877	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	221.850339944146	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260262_136260356_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_10296.nic	chr1	+	2630	6	NIC	ENSG00000143363.17	novel	2788	7	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	70.9072633797131	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005192	True	NA	13	True	ATTAAA	-16	NA	151008455	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_102960.known	chr3	+	1683	14	FSM	ENSG00000114054.14	ENST00000484181.5	1683	14	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_11	154.128625297492	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327633_136327733_136328757_136328858_136329904
transcript_102961.known	chr3	+	1727	14	FSM	ENSG00000114054.14	ENST00000483687.5	1727	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	178.749667935306	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGTGCCTTACTGTAA	136247673	True	NA	17	True	ATTAAA	-14	NA	136250354	136330169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_102962.known	chr3	+	1841	16	FSM	ENSG00000114054.14	ENST00000469217.5	1841	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	221.850339944146	807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTGCCTTACTGTAAA	136247677	True	NA	18	True	ATTAAA	-15	NA	136250358	136330170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136250559_136255855_136255976_136256554_136256624_136259175_136259236_136260478_136260536_136261951_136262066_136283836_136283948_136293755_136293865_136297951_136298073_136301029_136301112_136316940_136317065_136326802_136326911_136327154_136327256_136327633_136327733_136328757_136328858_136329904
transcript_10297.known	chr1	+	825	6	FSM	ENSG00000143363.17	ENST00000450884.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	65.4473834465519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGAAGCTGACCCCTG	151005213	True	NA	NA	False	NA	NA	NA	151008476	151033837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151024610_151024796_151025514_151025674_151027232_151027328_151028785_151028945_151033805
transcript_10298.known	chr1	+	845	5	FSM	ENSG00000143363.17	ENST00000431193.5	845	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	88.5593021652723	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGGATGAGTGCCCTC	151005218	True	NA	NA	False	NA	NA	NA	151008481	151034113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151025514_151025674_151027232_151027328_151033805
transcript_102990.known	chr3	-	2046	4	FSM	ENSG00000239213.7	ENST00000661609.1	2046	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40.8765077873452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTAAAATGAGGAACTCTA	-136860035	True	NA	NA	False	AAGAAA	-11	NA	136862031	136835344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136836984_136842230_136842294_136846527_136846587_136861746
transcript_102993.known	chr3	+	4451	4	FSM	ENSG00000158092.7	ENST00000481752.6	4451	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	54.0637483799347	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACGAATCTCTGAAACGT	136859839	True	NA	NA	False	AATAAA	-24	NA	136862207	136951606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862354_136927983_136928228_136945582_136946296_136948258
transcript_1030.known	chr1	+	584	3	FSM	ENSG00000197530.13	ENST00000511910.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	213.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGCCTCTGCTGTCTG	1627608	False	NA	9	True	TATAAA	-15	NA	1629105	1630603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1629312_1629638_1629705_1630291
transcript_10301.known	chr1	+	2238	4	FSM	ENSG00000143363.17	ENST00000368935.1	2238	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	84.9745059807156	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTCTTACTGTCTTTT	151005266	True	NA	13	True	ATTAAA	-16	NA	151008529	151035713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151008672_151017811_151017905_151027232_151027328_151033805
transcript_103012.known	chr3	-	827	4	FSM	ENSG00000239213.7	ENST00000474250.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	46.7332857821917	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTTTTACCTTTTTTTC	-136860053	True	NA	-135	True	GATAAA	-5	NA	136862049	136842190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136858517_136858604_136861746
transcript_103013.known	chr3	-	518	4	FSM	ENSG00000239213.7	ENST00000666660.1	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.16441400296898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATAAGAGATAAAAAAATTA	-136860037	True	NA	NA	False	AATGAA	-43	NA	136862033	136842207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842294_136846527_136846587_136858517_136858604_136861746
transcript_10303.known	chr1	+	2247	10	FSM	ENSG00000163141.20	ENST00000368931.8	2247	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.01438604565527	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCCCCTTCCCCGCGG	151036511	True	NA	NA	False	NA	NA	NA	151036585	151047720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151036767_151037566_151037663_151038503_151038569_151038795_151039027_151042955_151043139_151043331_151043435_151043595_151043728_151045796_151045884_151046066_151046166_151046650
transcript_103034.known	chr3	-	2304	3	FSM	ENSG00000239213.7	ENST00000666310.1	2304	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	52.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACCGTCCCTTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	136862272	136841024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136861572
transcript_103035.known	chr3	-	1943	3	FSM	ENSG00000239213.7	ENST00000470236.2	1943	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	55.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATGGTGGTTCATGCC	-136860058	True	NA	NA	False	AATACA	-32	NA	136862054	136841125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136861614
transcript_103036.known	chr3	-	1818	3	FSM	ENSG00000239213.7	ENST00000461864.7	1860	3	42	0	-4	0	multi-exon	FALSE	canonical	3	90	junction_2	14	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-136860041	True	NA	NA	False	NA	NA	NA	136862037	136841101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_136842570_136846527_136846587_136861746
transcript_103045.known	chr3	+	1577	2	FSM	ENSG00000168917.9	ENST00000393079.3	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818773	True	NA	11	True	ATTAAA	-17	NA	136819083	136855888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136819215_136854442
transcript_103048.known	chr3	+	1949	2	FSM	ENSG00000168917.9	ENST00000446465.3	1949	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATCTGGTATCTTTATTG	136818815	True	NA	11	True	ATTAAA	-17	NA	136819125	136855888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136819629_136854442
transcript_10305.known	chr1	-	1174	6	FSM	ENSG00000197622.13	ENST00000492796.5	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	60.310529760565	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTGAAGCTGGCTTT	-151052859	True	NA	NA	False	NA	NA	NA	151059615	151052945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151056650_151056787_151059478
transcript_103051.known	chr3	+	577	2	FSM	ENSG00000158092.7	ENST00000460960.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTTCTAGCAGGGGCT	136859898	True	NA	NA	False	NA	NA	NA	136862266	136928473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862354_136927983
transcript_103053.known	chr3	+	1937	4	FSM	ENSG00000158092.7	ENST00000288986.6	1937	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	18.4451137763426	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCTCCCTCATCTGGT	136859839	True	NA	7	True	AATAAA	-21	NA	136862207	136949126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136862320_136927983_136928228_136945582_136946296_136948258
transcript_103054.known	chr3	+	1787	7	FSM	ENSG00000174564.13	ENST00000475972.1	1787	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.23441288469042	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAGTTCTAGTTACATT	NA	False	NA	15	True	AATAAA	-27	NA	136980473	137011079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_136980593_136982159_136982351_136986693_136986785_136989440_136989566_136991937_136992089_136995413_136995557_137010112
transcript_103056.known	chr3	-	3492	16	FSM	ENSG00000158163.15	ENST00000327532.7	3492	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	6.35819680936873	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGTATGTATTTCATTA	-138114894	True	NA	-5	True	AATATA	-39	NA	138115608	138061989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138062978_138064627_138064768_138067530_138067701_138068150_138068368_138071642_138071836_138077498_138077633_138080566_138080621_138081733_138081765_138084112_138084254_138086960_138087024_138088378_138088508_138092382_138092545_138094861_138094984_138097762_138097848_138103470_138104053_138115327
transcript_103057.known	chr3	-	2662	8	FSM	ENSG00000138231.13	ENST00000260803.9	2662	8	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	13.6217113612117	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTGAGATTAGTATAACC	-138173646	True	NA	63	True	AATAAA	-42	NA	138174921	138160987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138162583_138163348_138163495_138163777_138163859_138167080_138167306_138170106_138170193_138171632_138171714_138173501_138173627_138174598
transcript_103063.known	chr3	-	623	4	FSM	ENSG00000138231.13	ENST00000463982.2	623	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	41.3467720088952	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTTAGTAGAGACGG	-138173591	True	NA	NA	False	NA	NA	NA	138174866	138171319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138171469_138171632_138171714_138173501_138173627_138174598
transcript_103064.known	chr3	+	3043	23	FSM	ENSG00000114098.18	ENST00000481646.5	3043	23	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	94.3357376870435	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAGAAAAAGTT	NA	False	NA	40	True	TATAAA	-6	NA	138187266	138296549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_103069.known	chr3	+	2777	22	FSM	ENSG00000114098.18	ENST00000491704.5	2777	22	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	103.268248100564	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACAGTTTGAATGAAATG	138186292	True	NA	93	True	TATAAA	-17	NA	138187300	138296394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_103071.nic	chr3	+	2787	21	NIC	ENSG00000114098.18	novel	4757	22	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_1	98.1908727937582	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAAAAAG	138187338	False	NA	32	True	AATATA	-41	NA	138187361	138296541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_103076.known	chr3	+	1920	20	FSM	ENSG00000114098.18	ENST00000485396.5	1920	20	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	103.155075149436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGGAAGTACAGGAACC	138183908	True	NA	NA	False	NA	NA	NA	138187527	138295933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_103078.known	chr3	+	3181	13	FSM	ENSG00000114098.18	ENST00000358441.6	3181	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	105.208523102139	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTTTTGTGTGGTAAAG	138186333	True	NA	NA	False	AATAAA	-24	NA	138187341	138246887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188400_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_103079.known	chr3	+	2910	13	FSM	ENSG00000114098.18	ENST00000471453.5	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	98.0228148046271	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAGAAAAAGTTATAA	138183909	True	NA	NA	False	NA	NA	NA	138187528	138246857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138188454_138188531_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_103084.nic	chr3	+	1952	12	NIC	ENSG00000114098.18	novel	3181	13	NA	NA	-13	0	intron_retention	FALSE	canonical	3	38	junction_2	125.264084673505	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	7	True	AATAAA	-17	NA	138187287	138245681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_138187600_138188400_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_103086.nic	chr3	+	1892	12	ISM	ENSG00000114098.18	ENST00000491704.5	2777	22	-7	50713	-7	0	5prime_fragment	FALSE	canonical	3	38	junction_2	118.963220929346	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	NA	False	NA	7	True	AATAAA	-17	NA	138187293	138245681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_138187600_138188454_138188531_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_103088.known	chr3	+	1714	11	FSM	ENSG00000114098.18	ENST00000489213.5	1714	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	100.371559716884	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTACTGTGCAAGTTTAA	138187326	True	NA	24	True	NA	NA	NA	138187349	138245635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_10309.known	chr1	-	3006	5	FSM	ENSG00000197622.13	ENST00000357235.6	3006	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	11.4755174175285	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTGCACAGTAATCATTG	-151052866	True	NA	-16	True	AATAAA	-14	NA	151059622	151050984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151053328_151054230_151054322_151055015_151055127_151055676_151055994_151059478
transcript_1031.known	chr1	+	2821	2	FSM	ENSG00000197530.13	ENST00000477990.1	2821	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAGAAAAAATGAGC	1615007	True	NA	NA	False	NA	NA	NA	1615515	1619210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1615634_1616507
transcript_103106.known	chr3	+	1656	12	FSM	ENSG00000114098.18	ENST00000470821.5	1656	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	71.5059958186482	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTTAGTGAGTG	138183911	True	NA	7	True	AATAAA	-17	NA	138187530	138245681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087
transcript_103107.known	chr3	+	4757	22	FSM	ENSG00000114098.18	ENST00000469044.6	4757	22	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	88.0365055181933	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAACTTCTAAAAAGGAG	138186292	True	NA	2	True	AATAAA	-16	NA	138187300	138298373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138187600_138209816_138209894_138221925_138221998_138223388_138223532_138223635_138223734_138228917_138229011_138235033_138235115_138237308_138237385_138237481_138237573_138239467_138239529_138241782_138241984_138245087_138245184_138263738_138263822_138264130_138264213_138267154_138267242_138270039_138270133_138272966_138273117_138274448_138274545_138284430_138284527_138289047_138289121_138290545_138290640_138295858
transcript_103108.known	chr3	+	4538	6	FSM	ENSG00000158186.13	ENST00000289104.8	4538	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.0678465614699	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	NA	False	NA	14	True	AATAAA	-14	NA	138347696	138405533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138348326_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_103111.known	chr3	+	4098	6	FSM	ENSG00000158186.13	ENST00000423968.7	4098	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	6.27375485654325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTCTTAGTTCCTTTT	138348564	True	NA	14	True	AATAAA	-14	NA	138348578	138405533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138348768_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_103113.nic	chr3	+	1391	6	NIC	ENSG00000158186.13	novel	1534	5	NA	NA	-34	-388	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	6.99714227381436	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAATATTGTTGTTGTT	138348805	False	NA	NA	False	NA	NA	NA	138348815	138402798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_138349033_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_103114.known	chr3	+	856	6	FSM	ENSG00000158186.13	ENST00000474559.1	856	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	15.8543369460851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCCCAAGGACTTGGT	138349249	True	NA	NA	False	NA	NA	NA	138349261	138402362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138349380_138372865_138373077_138397323_138397478_138398468_138398569_138400533_138400614_138402169
transcript_103118.nnic	chr3	+	809	3	NNC	ENSG00000158186.13	novel	4538	6	NA	NA	222	458	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTTCTTAATGAGCATA	138347906	False	NA	NA	False	AATAAA	-15	NA	138347918	138373411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_138348326_138372865_138373077_138373220
transcript_103120.nnic	chr3	+	619	3	NNC	ENSG00000158186.13	novel	271	2	NA	NA	-34	458	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	11.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTTTCTTAATGAGCATA	138348805	False	NA	NA	False	AATAAA	-15	NA	138348815	138373411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_138349033_138372865_138373077_138373220
transcript_103123.known	chr3	+	394	2	FSM	ENSG00000158186.13	ENST00000477784.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAACAGCTTGCCCAAGAT	138348890	False	NA	NA	False	AAAAAG	-2	NA	138348906	138349951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138349033_138349683
transcript_103124.known	chr3	+	271	2	FSM	ENSG00000158186.13	ENST00000475711.5	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAAAAGTGCCCTCACC	138348676	True	NA	NA	False	NA	NA	NA	138348849	138372953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138349033_138372865
transcript_103127.known	chr3	-	2028	18	FSM	ENSG00000114107.9	ENST00000474781.5	2028	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_16	52.9494111242826	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAATCAAATCATTTTTAC	-138594325	False	NA	-15	True	ATTAAA	-19	NA	138594339	138495012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572915_138591853_138591957_138594197
transcript_103128.known	chr3	-	1993	18	FSM	ENSG00000114107.9	ENST00000484888.5	1993	18	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_16	35.3152877685148	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTACTGTGTAAATT	-138589477	True	NA	-5	True	ATTAAA	-29	NA	138594224	138495002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_103135.nic	chr3	-	2582	17	NIC	ENSG00000114107.9	novel	2636	18	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_15	51.5657574728618	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGTCCTCAGTGATG	-138589533	True	NA	-3	True	AATAAA	-23	NA	138594280	138494343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138591853_138591957_138594197
transcript_103138.known	chr3	-	2037	16	FSM	ENSG00000114107.9	ENST00000481834.5	2037	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_14	38.1587327998309	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-138589501	True	NA	1	True	ATTAAA	-16	NA	138594248	138499883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572933_138591853_138591957_138594197
transcript_103139.nic	chr3	-	2180	16	ISM	ENSG00000114107.9	ENST00000484888.5	1993	18	-115	4881	0	0	5prime_fragment	FALSE	canonical	3	108	junction_14	34.5289572516879	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTTCCCTGTTTGGAA	-138594325	False	NA	1	True	ATTAAA	-16	NA	138594339	138499883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853_138591957_138594197
transcript_103141.known	chr3	-	1811	14	FSM	ENSG00000114107.9	ENST00000489254.5	1811	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	63.5302658152491	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTAGAGTGGAGTT	-138594305	False	NA	NA	False	NA	NA	NA	138594319	138494757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138495077_138498030_138498111_138500109_138500225_138500398_138500568_138500734_138500882_138505294_138505466_138508438_138508545_138525489_138525565_138529198_138529288_138529374_138529463_138532513_138532571_138537177_138537348_138591853_138591957_138594197
transcript_103163.known	chr3	-	1054	6	FSM	ENSG00000114107.9	ENST00000464035.5	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_5	47.8179882471022	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTCAAAATAACTGAT	-138591942	False	NA	NA	False	AATAAA	-17	NA	138591956	138536918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138537348_138570317_138570499_138571033_138571158_138571265_138571357_138572858_138572985_138591853
transcript_103165.known	chr3	+	1622	6	FSM	ENSG00000158234.13	ENST00000338446.8	1622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.8390871297257	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	138608449	True	NA	NA	False	AATAAA	-15	NA	138608608	138633376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138608938_138610603_138611038_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_103168.known	chr3	+	946	5	FSM	ENSG00000158234.13	ENST00000393035.6	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	7.69740215917033	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	138608750	False	NA	NA	False	AATAAA	-15	NA	138608850	138633376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138608938_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_103170.known	chr3	+	927	5	FSM	ENSG00000158234.13	ENST00000393034.6	927	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	44.0511066830335	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATCTGCTTGATTTG	138608911	True	NA	NA	False	AATAAA	-8	NA	138609071	138633369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_138609147_138621406_138621540_138622187_138622417_138629106_138629157_138632929
transcript_103173.nnic	chr3	+	846	3	NIC	ENSG00000158234.13	novel	946	5	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	59	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTGATTTGTGTTTAT	138608429	True	NA	NA	False	AATAAA	-15	NA	138608588	138633376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_138608938_138629106_138629157_138632929
transcript_103176.known	chr3	-	6259	24	FSM	ENSG00000051382.9	ENST00000674063.1	6259	24	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_22	29.4654967876868	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTTGTGCTATCAAATA	-138829747	True	NA	NA	False	ATTAAA	-17	NA	138834928	138652697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742782_138755753_138755980_138759172_138759360_138796462_138796568_138834694
transcript_103183.known	chr3	-	4747	23	FSM	ENSG00000051382.9	ENST00000462898.5	4747	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	68.4317238307372	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAGTCAAATAAATG	-138829736	True	NA	2	True	ATTAAA	-29	NA	138834917	138654067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_138655527_138656141_138656275_138657689_138657836_138663905_138664030_138665035_138665204_138681966_138682046_138683677_138683788_138684624_138684804_138688874_138688975_138690999_138691144_138694785_138694908_138698906_138699096_138704442_138704494_138707158_138707290_138712207_138712305_138714467_138714720_138733360_138733439_138734633_138734805_138737706_138737887_138742557_138742756_138755753_138755980_138759172_138759360_138834694
transcript_103184.nic	chr3	-	439	3	ISM	ENSG00000051382.9	ENST00000483968.5	721	5	-77	14243	7	-10825	5prime_fragment	FALSE	canonical	3	11	junction_1	97	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAAAATTATGCTAATTG	-138829729	True	NA	NA	False	AATACA	-18	NA	138834910	138769999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_138770118_138796462_138796568_138834694
transcript_103185.nnic	chr3	+	354	3	Antisense	novelGene_ENSG00000244578.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTTTTTTTCTTTGACT	138935849	True	NA	NA	False	ATTAAA	-17	NA	138935874	138939339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_138935966_138938583_138938768_138939260
transcript_103188.known	chr3	+	1401	9	FSM	ENSG00000175110.14	ENST00000498505.5	1401	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	258.645721741149	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGTTAAAAAGTCTGGTGT	139338029	True	NA	118	True	NA	NA	NA	139344021	139357223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344199_139346880_139347045_139348159_139348325_139349327_139349435_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_103190.known	chr3	+	1205	8	FSM	ENSG00000175110.14	ENST00000680020.1	1205	8	0	0	0	0	multi-exon	TRUE	canonical	3	448	junction_1	58.8800232919209	2179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAGCAAAAATTATTACCC	139338027	True	NA	24	True	ATTAAA	-26	NA	139344019	139357129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_103194.known	chr3	+	1065	8	FSM	ENSG00000175110.14	ENST00000478464.6	4352	8	0	3287	0	-32	multi-exon	TRUE	canonical	3	18	junction_1	192.143441316159	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATTTTAAAAATACATT	139344350	True	NA	-91	True	NA	NA	NA	139344564	139357014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344719_139346877_139347045_139348159_139348325_139350178_139350323_139350976_139351061_139352646_139352793_139355681_139355791_139356918
transcript_103198.known	chr3	+	1774	7	FSM	ENSG00000175110.14	ENST00000480938.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	57.6293231687557	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACATTTCTCTGTTAATA	139338034	False	NA	-54	True	AATACA	-20	NA	139344026	139357051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139344199_139346877_139347045_139348159_139348325_139350178_139351061_139352646_139352793_139355681_139355791_139356918
transcript_1032.known	chr1	-	2534	21	FSM	ENSG00000248333.9	ENST00000340677.9	2534	21	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_19	57.3586087697392	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTCAGCCGGGACCACA	-1653001	True	NA	NA	False	NA	NA	NA	1659012	1635737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_10320.known	chr1	+	2085	2	FSM	ENSG00000143443.10	ENST00000368926.6	2085	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTCAGTCACTGTTCTG	151047332	True	NA	NA	False	AATACA	-38	NA	151047750	151051420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151048853_151050437
transcript_103200.known	chr3	-	3221	22	FSM	ENSG00000184432.11	ENST00000507777.6	3221	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	196.555243427442	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378142	True	NA	22	True	NA	NA	NA	139389676	139357405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389630
transcript_103202.known	chr3	-	3495	23	FSM	ENSG00000184432.11	ENST00000514508.2	3495	23	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_22	227.002603108823	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378136	True	NA	22	True	NA	NA	NA	139389670	139357405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139385003_139385201_139389547
transcript_103203.nic	chr3	-	3202	22	NIC	ENSG00000184432.11	novel	3489	23	NA	NA	0	47	combination_of_known_junctions	FALSE	canonical	3	31	junction_21	190.299382225176	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGTACTTGTTTCCTTT	-139378146	True	NA	31	True	CATAAA	-15	NA	139389680	139357590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389468
transcript_103208.known	chr3	-	3275	22	FSM	ENSG00000184432.11	ENST00000333188.10	3275	22	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_21	65.0856404252825	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTTTCTTGACCTCATT	-139378113	True	NA	22	True	NA	NA	NA	139389647	139357405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139357959_139358199_139358272_139358743_139358813_139358997_139359179_139359269_139359363_139361080_139361296_139362406_139362518_139366567_139366776_139367014_139367146_139368144_139368289_139369260_139369368_139369455_139369545_139371722_139371834_139373212_139373413_139373665_139373809_139374488_139374589_139375467_139375615_139378040_139378190_139379046_139379174_139379379_139379467_139383297_139383436_139389547
transcript_103209.known	chr3	-	3524	2	FSM	ENSG00000184432.11	ENST00000504295.1	3524	2	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAGAAAAGAAAAAAA	-139378112	True	NA	NA	False	NA	NA	NA	139389646	139380010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139383436_139389547
transcript_103215.known	chr3	+	1201	4	FSM	ENSG00000248932.7	ENST00000653359.1	1201	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5777619273972	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	139388948	True	NA	NA	False	AATAAA	-18	NA	139389760	139445098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139389934_139419556_139419681_139423015_139423115_139444293
transcript_103219.nic	chr3	+	978	4	FSM	ENSG00000248932.7	ENST00000685603.1	926	4	-52	0	-2	0	multi-exon	FALSE	canonical	3	7	junction_1	12.657891697365	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	139388991	True	NA	NA	False	AATAAA	-16	NA	139389803	139444604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390248_139419556_139419681_139423015_139423115_139444293
transcript_103223.nic	chr3	+	961	4	FSM	ENSG00000248932.7	ENST00000691594.1	1414	4	-44	497	-4	0	multi-exon	FALSE	canonical	2	13	junction_1	10.3387082795139	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	139388998	True	NA	NA	False	AATAAA	-16	NA	139389810	139444604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390238_139419556_139419681_139423015_139423115_139444293
transcript_103225.nic	chr3	+	551	3	FSM	ENSG00000248932.7	ENST00000690901.1	538	3	-13	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	11	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	139388980	True	NA	NA	False	AATAAA	-16	NA	139389792	139444604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139389934_139423015_139423115_139444293
transcript_103226.nic	chr3	+	1045	3	FSM	ENSG00000248932.7	ENST00000690901.1	538	3	-13	-494	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATAAGTGCTTTCTTTT	139388980	True	NA	NA	False	AATAAA	-18	NA	139389792	139445098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139389934_139423015_139423115_139444293
transcript_103227.known	chr3	+	843	3	FSM	ENSG00000248932.7	ENST00000504670.7	852	3	9	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGTGGATGAAAGAAATGT	139389002	True	NA	NA	False	AATAAA	-16	NA	139389814	139444604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390248_139423015_139423115_139444293
transcript_103229.known	chr3	+	551	3	FSM	ENSG00000248932.7	ENST00000507362.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCCAGCAAGGAGGAGAG	139389005	True	NA	NA	False	NA	NA	NA	139389817	139444325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_139390238_139423015_139423115_139444293
transcript_103231.nic	chr3	-	499	2	ISM	ENSG00000114113.6	ENST00000232217.6	694	4	21572	0	21572	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGATCTCCGTTTATTTC	NA	False	NA	NA	False	ATTAAA	-41	NA	139454944	139452883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_139453167_139454728
transcript_103235.known	chr3	-	1569	6	FSM	ENSG00000163864.17	ENST00000296202.11	1569	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.87054001888146	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGACAGGATGCTAATT	-139677559	True	NA	NA	False	NA	NA	NA	139677946	139560581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_103236.nic	chr3	-	1931	5	NIC	ENSG00000163864.17	novel	2454	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	1.87082869338697	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-139677630	True	NA	NA	False	AATAAA	-17	NA	139678017	139560190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_139561393_139573597_139573681_139578871_139579056_139627615_139627765_139677704
transcript_103237.known	chr3	-	1863	5	FSM	ENSG00000163864.17	ENST00000339837.9	1863	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.11737237261468	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGAAAAATTTCTCTTT	-139677611	True	NA	NA	False	AATAAA	-17	NA	139677998	139560190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139561393_139573597_139573681_139578871_139579056_139637962_139638063_139677704
transcript_103238.known	chr3	-	794	5	FSM	ENSG00000163864.17	ENST00000512391.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.47213595499958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTGGAAGGATGCGCAC	-139677618	True	NA	NA	False	NA	NA	NA	139678005	139561332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139561393_139578871_139579056_139627615_139627765_139637962_139638063_139677704
transcript_103240.known	chr3	-	360	3	FSM	ENSG00000163864.17	ENST00000505779.5	360	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	-139677349	False	NA	-5	True	AATAAA	-19	NA	139677736	139634359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139634588_139637962_139638063_139677704
transcript_103241.known	chr3	-	688	3	FSM	ENSG00000163864.17	ENST00000511003.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	-139677617	True	NA	-5	True	AATAAA	-19	NA	139678004	139634359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139634648_139637962_139638063_139677704
transcript_103242.known	chr3	-	449	3	FSM	ENSG00000163864.17	ENST00000509737.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATTCTGCCTGAAGCC	-139677441	True	NA	-5	True	AATAAA	-19	NA	139677828	139634359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_139634585_139637962_139638063_139677704
transcript_103245.nnic	chr3	+	776	5	NNC	ENSG00000114120.14	novel	659	5	NA	NA	-29	-212	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	131.858589026275	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCTGAAACCTAGAGGCT	140935155	True	NA	NA	False	ATTAAA	-12	NA	140941800	140963259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_140942096_140952337_140952443_140956526_140956692_140959462_140959541_140963126
transcript_10325.known	chr1	+	8807	9	FSM	ENSG00000143458.12	ENST00000368918.8	8807	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11102430216445	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTTCAGGGTGTCATTGA	151070662	True	NA	20	True	AATAAA	-30	NA	151070760	151125542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151070935_151088189_151088298_151090405_151090574_151093191_151093387_151097851_151098003_151103561_151103676_151107036_151107223_151117391_151117517_151117956
transcript_103250.known	chr3	+	5697	7	FSM	ENSG00000114120.14	ENST00000324194.12	5697	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	59.5699868502028	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGACTTGAGTGCTCT	140935190	True	NA	14	True	AATAAA	-28	NA	140941835	140980995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976259
transcript_103251.known	chr3	+	3537	4	FSM	ENSG00000114120.14	ENST00000507429.5	3537	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	37.7123616632825	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATTGTCTTGCATTTATG	140935241	True	NA	NA	False	AATAAA	-22	NA	140941886	140966211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126
transcript_103252.known	chr3	+	4638	7	FSM	ENSG00000114120.14	ENST00000446041.6	4638	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	99.6008701434547	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATATGGCTTTTTCTG	140935184	True	NA	9	True	ATTAAA	-10	NA	140941829	140979933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_140942096_140956526_140956692_140959462_140959541_140963126_140963228_140970926_140970994_140973715_140974006_140976262
transcript_103259.known	chr3	+	3302	6	FSM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	24.3146046646866	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGTATCTGTTGGTAA	141230053	True	NA	NA	False	AATAAA	-31	NA	141231824	141294924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_103261.known	chr3	+	3742	9	FSM	ENSG00000155893.13	ENST00000636601.1	3742	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	74.0125622783052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTATGGTGTTTTG	141230012	True	NA	NA	False	AATAAA	-18	NA	141231783	141321722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141305755_141307777_141308203_141308408_141311636_141311757_141321011
transcript_103264.known	chr3	+	479	5	FSM	ENSG00000155893.13	ENST00000505502.1	479	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	11.9451873154003	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCACCTGGTTTTGAT	141230110	True	NA	7	True	ATTAAA	-20	NA	141231881	141236389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141235397_141235555_141236271
transcript_103267.nic	chr3	+	823	5	ISM	ENSG00000155893.13	ENST00000286353.9	3302	6	0	7293	0	177	5prime_fragment	FALSE	canonical	3	126	junction_2	18.2756668824971	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAACCTTTCTCCTTCTTA	141230053	True	NA	NA	False	AATAAA	-23	NA	141231824	141287631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_141231912_141260122_141260255_141278341_141278501_141279377_141279505_141287313
transcript_103271.nnic	chr3	+	382	4	NIC	ENSG00000155893.13	novel	479	5	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_3	12.4988888395018	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCACCTGGTTTTGAT	141230050	True	NA	7	True	ATTAAA	-20	NA	141231821	141236389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_141231912_141234215_141234319_141234885_141234957_141236271
transcript_103275.known	chr3	+	3160	8	FSM	ENSG00000155893.13	ENST00000393010.6	3160	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	71.0742641214678	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTAATGGTTTGTACCTA	141230089	True	NA	19	True	AATAAA	-25	NA	141231860	141294644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141231912_141234215_141234319_141234885_141234957_141260122_141260255_141278341_141278501_141279377_141279505_141287313_141287454_141292267
transcript_103276.known	chr3	+	644	3	FSM	ENSG00000177311.12	ENST00000510338.5	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAATGAAAAAAGGCA	141401878	True	NA	NA	False	NA	NA	NA	141402348	141442826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141402450_141403926_141404032_141442388
transcript_103278.nic	chr3	+	2164	19	ISM	ENSG00000155903.14	ENST00000286364.9	5638	24	40	28378	20	6521	5prime_fragment	FALSE	canonical	3	103	junction_2	13.791323985896	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTTCCTTCAGTGTGCT	141484650	True	NA	7	True	ATTAAA	-20	NA	141487066	141586966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645
transcript_103279.known	chr3	+	5638	24	FSM	ENSG00000155903.14	ENST00000286364.9	5638	24	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_19	22.2259406676821	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTGTGAGACTGTAT	141484610	True	NA	8	True	AATAAA	-17	NA	141487026	141615344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141487217_141512162_141512281_141516327_141516432_141529707_141529803_141540532_141540610_141553856_141553941_141555839_141555913_141558885_141558963_141559893_141559996_141570911_141571069_141571405_141571555_141572608_141572724_141573146_141573222_141573943_141574068_141576999_141577107_141580367_141580452_141581099_141581178_141586024_141586099_141586645_141586753_141607677_141607761_141608488_141608698_141609419_141609524_141609876_141610067_141612282
transcript_103283.known	chr3	+	862	4	FSM	ENSG00000114125.14	ENST00000477393.1	862	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	954.695064754535	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCGCGCACACAGCTTAGA	141725507	True	NA	16	True	ATTAAA	-28	NA	141738318	141745517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141738510_141742643_141742908_141743508_141743557_141745158
transcript_103286.known	chr3	+	782	2	FSM	ENSG00000114125.14	ENST00000480908.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCTTACTCTTAATTTGT	141725465	True	NA	21	True	AATAAA	-17	NA	141738276	141745700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141738517_141745158
transcript_103291.nic	chr3	+	1463	7	NIC	ENSG00000069849.11	novel	734	5	NA	NA	38	18	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	743.000093464926	865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGGTTCTTTGTAA	141875825	True	NA	22	True	AATAAA	-18	NA	141876161	141926200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_141876395_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_103292.known	chr3	+	1847	7	FSM	ENSG00000069849.11	ENST00000286371.8	1847	7	0	0	0	0	multi-exon	FALSE	canonical	3	1662	junction_5	156.61488505957	1208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGTTTTGTGTAAGCAT	141863241	True	NA	39	True	TATAAA	-33	NA	141876642	141926549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_141876911_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_103293.nnic	chr3	+	1570	7	NIC	ENSG00000069849.11	novel	569	5	NA	NA	-306	18	combination_of_known_splicesites	FALSE	canonical	2	62	junction_1	721.11428051007	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTGGGTTCTTTGTAA	141877181	True	NA	22	True	AATAAA	-18	NA	141877222	141926200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_141877563_141903619_141903749_141907166_141907275_141913651_141913837_141915969_141916021_141921976_141922064_141925530
transcript_1033.known	chr1	-	2992	20	FSM	ENSG00000248333.9	ENST00000341832.11	2992	20	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_16	45.9945197265429	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCCGTGTCGTCCTTTGA	-1652993	True	NA	NA	False	ATTAAA	-18	NA	1659004	1635224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642385_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_103301.known	chr3	-	1403	8	FSM	ENSG00000114126.18	ENST00000477292.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	145.54962685473	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGTCCTTGACGATCGT	-142024054	True	NA	NA	False	NA	NA	NA	142028626	141952142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974192_141978519_141978683_142028578
transcript_103309.known	chr3	-	2360	11	FSM	ENSG00000114126.18	ENST00000486111.5	2360	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	95.0789145920377	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGTACATGTCACCT	-142024093	False	NA	-9	True	AAGAAA	-30	NA	142028665	141951501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141952697_141952910_141953017_141959673_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_10331.nic	chr1	+	767	4	ISM	ENSG00000143458.12	ENST00000368918.8	8807	9	0	32034	0	-4407	5prime_fragment	FALSE	canonical	0	0	junction_1	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGACTCAGTGTCATT	151070662	True	NA	NA	False	ATTAAA	-24	NA	151070760	151093508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_151070935_151088189_151088298_151090405_151090574_151093191
transcript_103310.known	chr3	-	865	9	FSM	ENSG00000114126.18	ENST00000467667.5	865	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	90.7771137181614	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATGACATAGAAGTACTA	-142024025	True	NA	NA	False	NA	NA	NA	142028597	141959799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141959841_141963811_141963964_141970072_141970142_141974047_141974195_141978519_141978683_141993537_141993586_141995019_141995142_142005440_142005545_142028578
transcript_103311.known	chr3	-	256	2	FSM	ENSG00000114126.18	ENST00000493204.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCAAGTGGATTGGCCT	NA	False	NA	NA	False	AATGAA	-23	NA	141978688	141974104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_141974192_141978519
transcript_103312.known	chr3	-	9815	16	FSM	ENSG00000175066.16	ENST00000392993.7	9815	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	2.71947707391615	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTTATTTGCTTTG	-142223867	True	NA	-2	True	ATTAAA	-18	NA	142225585	142157526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142165771_142170324_142170459_142171418_142171479_142172352_142172457_142177481_142177577_142181460_142181566_142182922_142183050_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_103315.nic	chr3	-	1134	10	ISM	ENSG00000175066.16	ENST00000480757.5	4479	17	-72	21732	-28	525	5prime_fragment	FALSE	canonical	3	13	junction_1	2.44948974278318	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTGGTATTTAGTTT	-142223902	True	NA	NA	False	ATTAAA	-16	NA	142225620	142185640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_142185794_142185928_142185990_142186193_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_103316.nnic	chr3	-	1060	9	NIC	ENSG00000175066.16	novel	4479	17	NA	NA	-28	525	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	5.25446238924593	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAGTGGTATTTAGTTT	-142223902	True	NA	NA	False	ATTAAA	-16	NA	142225620	142185640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_142185794_142185928_142185990_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_103317.known	chr3	-	744	8	FSM	ENSG00000175066.16	ENST00000460544.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	1.38505138783324	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAATGGTTCTTGAATT	-142223698	False	NA	NA	False	AATAAA	-18	NA	142225416	142186165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142186268_142186451_142186514_142187703_142187780_142198801_142198934_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_103318.nnic	chr3	-	999	5	NNC	ENSG00000175066.16	novel	568	4	NA	NA	-28	-2320	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.72576857018122	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAGAATTTTCTGT	-142223902	True	NA	NA	False	AATAAA	-16	NA	142225620	142201176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_142201600_142204694_142204789_142213525_142213602_142215598_142215693_142225308
transcript_103320.known	chr3	-	2075	12	FSM	ENSG00000114127.11	ENST00000463916.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	5.57740423642835	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAGTTATGTAATTTCT	-142444861	True	NA	NA	False	AATAAA	-41	NA	142448010	142417840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_103322.known	chr3	-	10143	42	FSM	ENSG00000114127.11	ENST00000264951.8	10143	42	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.0492239345691	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTGTTCTTTTATTAC	-142444913	True	NA	1	True	ATTAAA	-22	NA	142448062	142306606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142311814_142312597_142312759_142313135_142313175_142318591_142318695_142318789_142318904_142329433_142329616_142332374_142332532_142332966_142333090_142335447_142335510_142347233_142347343_142355400_142355497_142356911_142357120_142359861_142359932_142365046_142365180_142365309_142365367_142370484_142370621_142371238_142371329_142375797_142375945_142376478_142376595_142380081_142380181_142383299_142383414_142384522_142384686_142397328_142397461_142400443_142400548_142403673_142403773_142403868_142403990_142404906_142405077_142412543_142412664_142414134_142414292_142417139_142417230_142418503_142418610_142418814_142418882_142421015_142421154_142421475_142421544_142422581_142422751_142422834_142422923_142423559_142423643_142425221_142425333_142425428_142425539_142426743_142426842_142432660_142432894_142447869
transcript_103326.nic	chr3	-	1581	5	ISM	ENSG00000175054.16	ENST00000653868.1	8096	35	-137	70034	-137	-838	5prime_fragment	FALSE	canonical	3	33	junction_1	5.67890834580027	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAGTTAAGTGCTTTGA	-142576480	True	NA	NA	False	AATAAA	-24	NA	142578870	142561176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_142561422_142562231_142563110_142566120_142566262_142568062_142568155_142578645
transcript_103327.nnic	chr3	-	981	4	NNC	ENSG00000175054.16	novel	4678	7	NA	NA	-137	-3765	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	18.9795211273157	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAACGATTATATCATCC	-142576480	True	NA	NA	False	ATTAAA	-21	NA	142578870	142564103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_142564627_142566120_142566262_142568062_142568155_142578645
transcript_103328.nic	chr3	-	1822	3	ISM	ENSG00000175054.16	ENST00000507148.1	724	6	-146	4418	-137	-4418	5prime_fragment	FALSE	canonical	3	37	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATATTATAGTACATT	-142576480	True	NA	NA	False	AAGAAA	-8	NA	142578870	142564756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_142566262_142568062_142568155_142578645
transcript_103332.known	chr3	+	3700	16	FSM	ENSG00000120756.13	ENST00000457734.7	3700	16	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_14	56.9277905186327	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTATATTTATTTCAT	142591782	True	NA	10	True	AATAAA	-20	NA	142596392	142713664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952_142698068_142703867_142704002_142704462_142704587_142711500_142711626_142711871
transcript_103340.nic	chr3	+	1732	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-34	15423	-34	-197	5prime_fragment	FALSE	canonical	3	356	junction_11	43.2526691480393	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTAGTCAGACACTTT	142591748	True	NA	3	True	AATAAA	-18	NA	142596358	142698241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_103341.nic	chr3	+	1929	12	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-34	15226	-34	0	5prime_fragment	FALSE	canonical	3	356	junction_11	43.2526691480393	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGTATAA	142591748	True	NA	NA	False	NA	NA	NA	142596358	142698438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_142596510_142664201_142664308_142669389_142669554_142670992_142671123_142676156_142676290_142678031_142678114_142684005_142684172_142684252_142684396_142686283_142686377_142689617_142689814_142694468_142694548_142697952
transcript_103346.nic	chr3	+	1261	2	ISM	ENSG00000120756.13	ENST00000457734.7	3700	16	-34	48353	-34	-4108	5prime_fragment	FALSE	canonical	3	483	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAACTGTGAAACTCA	142591748	True	NA	NA	False	AAAAAG	-21	NA	142596358	142665311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_142596510_142664201
transcript_103347.known	chr3	+	574	4	FSM	ENSG00000120756.13	ENST00000495744.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	227.210621817438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCAGTTGCTGACAGC	142591821	True	NA	NA	False	NA	NA	NA	142596431	142669494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142596510_142645295_142645581_142664201_142664308_142669389
transcript_103350.nic	chr3	+	3809	11	NIC	ENSG00000144935.16	novel	4324	12	NA	NA	-36	0	combination_of_known_junctions	TRUE	canonical	3	39	junction_7	16.2015431363806	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTTCATTGTATT	142723151	True	NA	NA	False	AATAAA	-21	NA	142724528	142807888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_142724732_142748257_142748461_142777631_142777764_142780833_142781030_142784703_142785041_142791018_142791159_142792823_142792968_142802168_142802345_142803976_142804179_142804435_142804631_142806007
transcript_10336.known	chr1	+	1913	7	FSM	ENSG00000163156.12	ENST00000368905.9	1913	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	48.4733603814164	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATTATCTCTGGCATC	151161290	True	NA	NA	False	AATAAA	-21	NA	151166143	151170296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_103364.known	chr3	-	1896	9	FSM	ENSG00000163710.9	ENST00000295992.8	1896	9	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_6	12.3939249231226	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTACAGAACAACCACTAAAC	-142889026	False	NA	NA	False	AATAAA	-15	NA	142889083	142817873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142818466_142820877_142821046_142823531_142823616_142829691_142829847_142838769_142838907_142842923_142843049_142848216_142848473_142887668_142887778_142888813
transcript_103367.known	chr3	-	704	4	FSM	ENSG00000163710.9	ENST00000495732.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	54.1007290975721	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCGAGAAACCAGTGAG	-142889004	False	NA	-97	True	AAAAAG	-23	NA	142889061	142846651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142846743_142848216_142848473_142887668_142887778_142888813
transcript_103368.known	chr3	-	666	2	FSM	ENSG00000163710.9	ENST00000483454.1	666	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCCCACTTAATGTTCC	-142888870	False	NA	NA	False	AATAAA	-1	NA	142888927	142887225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_142887778_142888813
transcript_103370.known	chr3	+	3491	28	FSM	ENSG00000163714.18	ENST00000493598.6	3491	28	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_9	89.8067884920692	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTTTTTTGCCCCACC	142993509	True	NA	24	True	AATAAA	-21	NA	143001620	143056846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021383_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028411_143028486_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_103373.known	chr3	+	7424	28	FSM	ENSG00000163714.18	ENST00000473835.7	7424	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	162.439918195373	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTGGTTAGGAAAGTTC	142993458	True	NA	NA	False	TTTAAA	-31	NA	143001569	143060725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143023974_143024019_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_103378.known	chr3	+	3557	27	FSM	ENSG00000163714.18	ENST00000488497.7	3557	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	206.882169962809	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAACGGTCTGTTTTTTA	NA	False	NA	NA	False	NA	NA	NA	143001167	143056500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852_143023065_143027148_143027254_143028339_143028407_143028482_143028647_143032783_143032947_143033270_143033351_143034887_143034976_143035981_143036105_143037178_143037336_143038107_143038204_143038893_143038961_143043116_143043277_143050938_143051050_143053675_143053795_143054942_143055120_143056311
transcript_103384.known	chr3	+	1580	12	FSM	ENSG00000163714.18	ENST00000461591.5	1580	12	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_9	120.659619598492	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTAGAAAGACCTCCTA	142993498	True	NA	NA	False	NA	NA	NA	143001609	143023395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841_143016976_143019968_143020037_143020598_143020694_143021349_143021386_143021472_143021556_143022496_143022663_143022852
transcript_103391.known	chr3	+	588	6	FSM	ENSG00000163714.18	ENST00000493782.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_5	45.5833302864106	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGATTTGCAGATCAAAA	142993412	True	NA	45	True	AAAAAG	-23	NA	143001523	143016888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143001674_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_103393.known	chr3	+	571	6	FSM	ENSG00000163714.18	ENST00000465175.2	571	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	298.369837617679	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGATTTGCAGATCAAA	143002215	False	NA	44	True	AAAAAG	-22	NA	143002227	143016887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_143002362_143010814_143010860_143012221_143012354_143014310_143014410_143016256_143016372_143016841
transcript_103394.known	chr3	+	377	3	FSM	ENSG00000241570.8	ENST00000608686.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	NA	False	NA	NA	False	AAGAAA	-45	NA	142962954	142964810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142963095_142964464_142964637_142964745
transcript_103396.known	chr3	+	280	3	FSM	ENSG00000241570.8	ENST00000608349.5	280	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGCCCTTGAGCCTTAA	142964040	False	NA	NA	False	AATGAA	-28	NA	142964057	142964812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142964099_142964464_142964637_142964745
transcript_103397.known	chr3	+	438	3	FSM	ENSG00000241570.8	ENST00000607937.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATATGCCCTTGAGCCTT	142964073	True	NA	NA	False	AAGAAA	-45	NA	142964129	142964810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_142964331_142964464_142964637_142964745
transcript_103399.known	chr3	-	561	1	FSM	ENSG00000268129.1	ENST00000597953.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	382	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTTTCATTTTTAAT	-143001166	True	NA	0	True	TTTAAA	-20	NA	143001467	143000906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143000900_143001500
transcript_103402.nnic	chr3	+	503	3	Antisense	novelGene_ENSG00000181804.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCTGAGATGTGATGGTA	NA	False	NA	NA	False	AATAAA	-16	NA	143797835	143812887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_143798087_143810930_143811009_143812713
transcript_103405.known	chr3	-	712	2	FSM	ENSG00000181804.15	ENST00000498717.2	712	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTTATGCAGTA	-143848371	True	NA	NA	False	AATAAA	-16	NA	143848469	143847593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143847984_143848147
transcript_103406.known	chr3	-	1107	1	FSM	ENSG00000243759.1	ENST00000460666.1	1107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGCCCTTCTGATAAATA	NA	False	NA	NA	False	AGTAAA	-28	NA	143518229	143517122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_143517100_143518200
transcript_103407.known	chr3	-	3749	20	FSM	ENSG00000152952.12	ENST00000282903.10	3749	20	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	71.4202187439199	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGTTCTATTATTG	-146158975	True	NA	-4	True	AATAAA	-14	NA	146161184	146069439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146077861_146077925_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_103409.known	chr3	-	3665	19	FSM	ENSG00000152952.12	ENST00000360060.7	3665	19	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_6	29.6045959061331	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTTGTTGTTCTATT	-146158958	True	NA	-8	True	AATAAA	-10	NA	146161167	146069443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146070873_146071041_146071168_146071276_146071424_146072560_146072666_146073286_146073353_146076781_146076896_146079115_146079258_146081737_146081864_146085168_146085274_146086786_146086909_146088585_146088712_146091799_146091902_146102754_146102853_146104278_146104343_146106531_146106645_146110284_146110449_146121111_146121249_146124137_146124230_146160880
transcript_103411.known	chr3	-	1375	11	FSM	ENSG00000114698.15	ENST00000493382.5	1375	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	5.98414572015087	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCTTACAGTCAGCACT	-146250720	True	NA	NA	False	NA	NA	NA	146251143	146194356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146223732_146223778_146250556_146250638_146250959
transcript_103412.known	chr3	-	3233	9	FSM	ENSG00000114698.15	ENST00000354952.7	3233	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.30116263352131	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTATTTTTTGACT	-146250682	True	NA	NA	False	AATAAA	-23	NA	146251105	146192334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146194456_146195123_146195283_146196631_146196794_146199812_146200040_146201034_146201078_146206525_146206762_146220814_146220926_146222064_146222093_146250959
transcript_103417.nic	chr3	-	1409	4	ISM	ENSG00000114698.15	ENST00000460885.5	609	5	-73	9005	1	876	5prime_fragment	FALSE	canonical	3	10	junction_1	4.92160768674447	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCTGAGTAGCATGAT	-146250755	True	NA	NA	False	AATAAA	-19	NA	146251178	146205710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_146206762_146220814_146220926_146222064_146222093_146250959
transcript_103418.nnic	chr3	-	546	4	NNC	ENSG00000114698.15	novel	3233	9	NA	NA	1	-11895	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.17726659862414	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATCTCTATACGAATAG	-146250755	True	NA	NA	False	AATAAA	-22	NA	146251178	146218481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_146218670_146220814_146220926_146222064_146222093_146250959
transcript_103428.known	chr3	-	1443	8	FSM	ENSG00000188313.13	ENST00000487389.5	1443	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	67.8019324268588	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAACTTCCTTTGAAAA	-146539250	True	NA	23	True	AAAAAG	-25	NA	146544737	146515816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146544466
transcript_10343.known	chr1	+	1094	5	FSM	ENSG00000163156.12	ENST00000461862.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	57.373229820187	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCTAGCCTTTCCCAAAT	151161168	True	NA	NA	False	ATTAAA	-18	NA	151166021	151167979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151166204_151166470_151166542_151166933_151167023_151167120_151167219_151167325
transcript_103435.known	chr3	-	1976	9	FSM	ENSG00000188313.13	ENST00000342435.9	1976	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_3	9.84171605971235	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGATTTTTGTTTTTAA	-146539120	True	NA	-6	True	AATAAA	-18	NA	146544607	146515179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146516102_146517005_146517168_146521543_146521706_146521832_146522054_146525604_146525648_146528613_146528832_146533469_146533551_146536539_146536566_146544466
transcript_103436.known	chr3	-	1257	4	FSM	ENSG00000188313.13	ENST00000469266.1	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	6.94422221866655	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTTTGTTGCACTAAAT	-146539240	True	NA	-4	True	AATAAA	-15	NA	146544727	146527942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_146528832_146533469_146533551_146536539_146536566_146544466
transcript_103439.known	chr3	+	1044	3	FSM	ENSG00000152977.10	ENST00000474034.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	2	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAATCATTTAAATTA	147421233	False	NA	NA	False	NA	NA	NA	147421326	147510293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_147421560_147507940_147508053_147509594
transcript_103442.known	chr3	+	418	2	FSM	ENSG00000152977.10	ENST00000481840.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTATGTGTAAAATGCT	NA	False	NA	NA	False	AATAAA	-32	NA	147507940	147509905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_147508048_147509594
transcript_103443.known	chr3	-	708	3	FSM	ENSG00000174963.18	ENST00000475502.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGTAATCTCGCTCCGC	-147392387	False	NA	NA	False	NA	NA	NA	147392397	147388841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_147388860_147390930_147391247_147392023
transcript_103444.known	chr3	-	834	3	FSM	ENSG00000174963.18	ENST00000463850.5	834	3	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAATATTTACGTCTAA	-147392420	False	NA	NA	False	NA	NA	NA	147392430	147388649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_147388860_147390930_147391247_147392122
transcript_103447.nic	chr3	-	814	2	ISM	ENSG00000174963.18	ENST00000463850.5	834	3	84	2007	45	-1815	5prime_fragment	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTCCCCCTATTTATTC	-147392288	True	NA	-12	True	GATAAA	-1	NA	147392346	147390656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_147391247_147392122
transcript_103448.known	chr3	+	2569	2	FSM	ENSG00000239922.2	ENST00000467198.1	2569	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGAAAG	147939992	True	NA	NA	False	AGTAAA	-11	NA	147940003	147943014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_147940117_147940558
transcript_103458.known	chr3	+	1890	7	FSM	ENSG00000163754.18	ENST00000296048.10	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_6	27.9026084005699	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGTTGTTTAATTAAAT	148991432	False	NA	7	True	AATAAA	-16	NA	148991451	149027632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149024052_149024273_149026759
transcript_103459.known	chr3	+	1563	6	FSM	ENSG00000163754.18	ENST00000484197.5	1563	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	117.02888532324	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTGGTTGTTTAATTAAA	148988995	True	NA	6	True	AATAAA	-15	NA	148991557	149027631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_148991648_148994141_148994278_148996301_148996477_148996741_148996905_149009275_149009403_149026759
transcript_103463.nic	chr3	-	705	4	ISM	ENSG00000071794.16	ENST00000494055.5	3633	26	-20	43282	-20	9355	5prime_fragment	FALSE	canonical	3	434	junction_2	1.24721912892465	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAGCGGTTTCAGATC	-149075642	True	NA	NA	False	AAGAAA	-2	NA	149086574	149074276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_149074349_149075880_149076048_149084681_149084890_149086316
transcript_103465.known	chr3	-	501	3	FSM	ENSG00000071794.16	ENST00000481663.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	218.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATAGATTCTTGAACTC	-149075573	True	NA	NA	False	NA	NA	NA	149086505	149083631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149083736_149084681_149084890_149086316
transcript_103467.known	chr3	+	4611	17	FSM	ENSG00000163755.9	ENST00000296051.7	4611	17	0	0	0	0	multi-exon	TRUE	canonical	3	363	junction_10	41.9672025961941	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAAAAAGAAATTTTAAG	149120960	True	NA	NA	False	NA	NA	NA	149129637	149173732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493_149153649_149155106_149155216_149157349_149157532_149158665_149158847_149160045_149160280_149162147_149162334_149162689_149162879_149163841_149163950_149167033_149167241_149167892_149167984_149172094
transcript_10347.known	chr1	-	2462	3	FSM	ENSG00000163155.12	ENST00000368908.10	2462	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAGTAGTTTTATTTC	-151165034	True	NA	-1	True	ATTAAA	-17	NA	151165902	151159747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151161021_151161735_151162101_151165078
transcript_103471.known	chr3	+	1894	7	FSM	ENSG00000163755.9	ENST00000486530.1	1894	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	42.2794933218878	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATAAAGTTGTATTTT	149121013	True	NA	-18	True	NA	NA	NA	149129690	149154109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149129941_149140003_149140499_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_103472.nic	chr3	+	1514	6	ISM	ENSG00000163755.9	ENST00000460120.5	2745	16	-36	18226	-36	0	5prime_fragment	FALSE	canonical	3	56	junction_1	169.996941148951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATCTCTTGTTATTTAT	149120924	True	NA	8	True	AATAAA	-17	NA	149129601	149154135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_149129941_149141016_149141189_149141294_149141381_149145353_149145547_149150598_149150681_149153493
transcript_103474.nic	chr3	+	430	2	ISM	ENSG00000163755.9	ENST00000486530.1	1894	7	-91	14017	-38	9641	5prime_fragment	FALSE	canonical	3	384	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTGTGTATCCGAATGAT	149120922	True	NA	NA	False	AATAAA	-16	NA	149129599	149140092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_149129941_149140003
transcript_103475.known	chr3	+	556	2	FSM	ENSG00000163755.9	ENST00000494327.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTAAGTAGAACTCAGACT	149120961	True	NA	NA	False	TTTAAA	-4	NA	149129638	149130451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149129941_149130197
transcript_10348.known	chr1	+	869	7	FSM	ENSG00000163156.12	ENST00000368902.1	869	7	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	174.750298044572	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTAAGTCTGGTTCC	151161225	True	NA	16	True	AATAAA	-25	NA	151166078	151169138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151166253_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_103480.known	chr3	-	3727	6	FSM	ENSG00000163762.7	ENST00000296059.7	3727	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	7.2773621594641	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCTCTAATTCTTTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	149333636	149318497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205_149333400_149333512
transcript_103482.known	chr3	-	907	5	FSM	ENSG00000163762.7	ENST00000470080.5	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2.58602010819715	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATACTTCTGCCC	-149333443	True	NA	NA	False	NA	NA	NA	149333482	149321276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149321493_149322255_149322437_149324879_149325023_149330329_149330420_149333205
transcript_103483.known	chr3	+	551	2	FSM	ENSG00000244468.1	ENST00000489011.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTTCATCCTGTGCC	149284762	True	NA	NA	False	AATAGA	-26	NA	149284781	149333653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149285183_149333503
transcript_103484.known	chr3	-	1555	5	FSM	ENSG00000169908.12	ENST00000305366.8	1555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.34520787991171	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTTGTTGTTTAGTTTC	-149377631	True	NA	NA	False	AATAAA	-14	NA	149377649	149369021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149369881_149371686_149371868_149375442_149375589_149375679_149375770_149377370
transcript_103485.known	chr3	+	754	2	FSM	ENSG00000240541.3	ENST00000496491.1	754	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTTTGGTCATTTCTA	NA	False	NA	NA	False	ATTAAA	-16	NA	149377777	149386583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149378316_149386367
transcript_103489.known	chr3	-	3694	5	FSM	ENSG00000114744.9	ENST00000473414.6	3694	5	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_1	19.1751792690447	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGTAGACTGAGGATCT	-149745931	True	NA	-7	True	AATAAA	-21	NA	149752489	149738471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149741719_149750677_149750852_149751402_149751486_149752209_149752288_149752377
transcript_10349.known	chr1	+	749	7	FSM	ENSG00000163156.12	ENST00000602841.5	749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	204.755748800044	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAACTTTCCTTAAGTCTG	151156645	False	NA	11	True	AATAAA	-20	NA	151156663	151169133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151156723_151166470_151166542_151166933_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_103490.known	chr3	-	589	2	FSM	ENSG00000114744.9	ENST00000490008.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGCAGTCTCTGGGATTA	-149745931	True	NA	NA	False	AAAAAG	-21	NA	149752489	149751810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149752288_149752377
transcript_103491.known	chr3	+	2866	11	FSM	ENSG00000082996.20	ENST00000344229.7	2866	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	120.542150304364	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTAAGATCCAGTAAATGT	149812753	False	NA	-1	True	AATAAA	-12	NA	149812769	149962122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149813354_149813924_149814027_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_103498.known	chr3	+	1027	10	FSM	ENSG00000082996.20	ENST00000474348.5	1027	10	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_5	74.4427860511798	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTCTGACACAGACAGTA	149809935	True	NA	NA	False	AAAAAG	-23	NA	149813227	149960833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149813354_149846010_149846141_149852515_149852597_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_10350.known	chr1	+	1158	2	FSM	ENSG00000163154.6	ENST00000368910.4	1158	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGGGCTCAATGTTTAAT	151156630	False	NA	NA	False	AATAAA	-15	NA	151156648	151159749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151156723_151158665
transcript_103503.known	chr3	+	767	9	FSM	ENSG00000082996.20	ENST00000467996.1	767	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	100.989789087808	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTAGACCCTTGGCT	149809972	True	NA	NA	False	ACTAAA	-34	NA	149813264	149960750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149813354_149852515_149852597_149872028_149872155_149895472_149895561_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_10351.known	chr1	+	862	5	FSM	ENSG00000163156.12	ENST00000497147.1	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_3	21.3834047803431	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACAATGGGTGCTGAG	151166647	False	NA	-11	True	NA	NA	NA	151166668	151169111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151167023_151167120_151167219_151167325_151167415_151168143_151168339_151168985
transcript_103515.known	chr3	+	761	8	FSM	ENSG00000082996.20	ENST00000467977.5	761	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	126.82818202238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGCTAACTAAAACCAAAAA	149809922	True	NA	NA	False	NA	NA	NA	149813214	149960765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_149813354_149872028_149872155_149895472_149895571_149902071_149902163_149911977_149912084_149921133_149921228_149960055_149960137_149960739
transcript_103520.nnic	chr3	+	407	3	NNC	ENSG00000243944.5	novel	372	3	NA	NA	-159	-110038	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCCTTTTTAAT	NA	False	NA	6	True	ATTAAA	-17	NA	150039054	150040746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_150039260_150039786_150039871_150040628
transcript_103521.known	chr3	-	894	3	FSM	ENSG00000070087.15	ENST00000468323.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_2	445.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTTCGCACATAGGC	-149955429	True	NA	NA	False	AAAAAG	-41	NA	149970898	149965712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149966265_149968357_149968526_149970724
transcript_103523.known	chr3	-	1620	3	FSM	ENSG00000070087.15	ENST00000481767.5	1620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	453.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAGATGAAATAAATTTA	-149970655	False	NA	-4	True	ATTAAA	-13	NA	149970715	149964934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149966265_149968357_149968551_149970618
transcript_103524.known	chr3	-	911	4	FSM	ENSG00000070087.15	ENST00000423691.2	911	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	464.664036338801	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACCAAATACTCTAGGCT	-149955453	True	NA	-14	True	AATAAA	-7	NA	149970922	149964912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_149965348_149966179_149966265_149968357_149968551_149970724
transcript_103525.known	chr3	+	2093	3	FSM	ENSG00000196428.13	ENST00000466814.1	2093	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTTGGCTCTATATGT	150410990	False	NA	18	True	ATTAAA	-15	NA	150411008	150460116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150411309_150457075_150457128_150458375
transcript_103531.known	chr3	+	2083	14	FSM	ENSG00000144895.12	ENST00000273435.9	2083	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	199.121770005042	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	150537582	True	NA	6	True	AATGAA	-21	NA	150546793	150584242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562556_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_103542.known	chr3	+	1913	13	FSM	ENSG00000144895.12	ENST00000487799.5	1913	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	203.272036525768	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACCATTTATCCAAGAT	150537473	True	NA	-68	True	NA	NA	NA	150546684	150584023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150562541_150562661_150563514_150563615_150564298_150564382_150567692_150567767_150567901_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_103546.known	chr3	+	3488	7	NNC	ENSG00000198843.14	novel	819	7	NA	NA	-12	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	395.876102952539	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTACTTTGTGGAATT	150591253	True	NA	13	True	AATAAA	-25	NA	150603278	150630445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_150603500_150614572_150614584_150622395_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_103547.known	chr3	+	944	7	FSM	ENSG00000198843.14	ENST00000477889.5	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	393.291417258105	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATGAAGGCCTGTACTG	150591265	True	NA	NA	False	NA	NA	NA	150603290	150627693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150603500_150618708_150618929_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_103549.known	chr3	+	1010	6	FSM	ENSG00000144895.12	ENST00000474505.5	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	58.5778114988944	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCATTATCACAAATTATTAA	150537574	True	NA	-36	True	TTTAAA	-14	NA	150546785	150564899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298
transcript_10355.known	chr1	-	913	6	FSM	ENSG00000163159.15	ENST00000496809.5	913	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	340.801760558833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCCCTGGGCCCCGGCCC	-151181961	True	NA	-106	True	NA	NA	NA	151190145	151176730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190123
transcript_103550.known	chr3	+	3437	6	FSM	ENSG00000198843.14	ENST00000471696.6	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	32.873089298087	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAAGGAACTCCTACTT	150591295	True	NA	4	True	AATAAA	-16	NA	150603320	150630436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150603500_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_103551.known	chr3	+	1078	6	FSM	ENSG00000198843.14	ENST00000485923.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	334.527726803026	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTAAGGTAAACATTAC	150591310	True	NA	NA	False	NA	NA	NA	150603335	150627905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150603687_150622384_150622496_150623042_150623170_150624811_150624900_150627009_150627164_150627658
transcript_103559.known	chr3	+	565	3	FSM	ENSG00000144895.12	ENST00000463863.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_1	60	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTCTAAGTTATTGGTT	150537466	True	NA	NA	False	AATATA	-45	NA	150546677	150558729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150546831_150552355_150552426_150558387
transcript_103567.known	chr3	-	1596	2	FSM	ENSG00000120742.11	ENST00000490945.1	1596	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAATGGAACTAAA	-150602965	True	NA	NA	False	NA	NA	NA	150603228	150565795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150567107_150602943
transcript_103571.known	chr3	+	1906	13	FSM	ENSG00000144895.12	ENST00000477551.5	1906	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	266.352979563252	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTTTATTATAAGT	150543142	False	NA	6	True	AATGAA	-21	NA	150552353	150584242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150552426_150558387_150558463_150562541_150562661_150563514_150563615_150564298_150564382_150567901_150567930_150568012_150568047_150568175_150568293_150571957_150572530_150575648_150575763_150581617_150581747_150583199_150583266_150583845
transcript_103575.nnic	chr3	+	670	4	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	-45	-7	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	3.09120616516523	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	NA	False	NA	NA	False	TATAAA	-27	NA	150703440	150719988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
transcript_103576.nnic	chr3	+	838	4	NIC	ENSG00000240137.7	novel	3626	3	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	NA	False	NA	21	True	AATAAA	-34	NA	150703440	150720156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_150703668_150706926_150707172_150707931_150708010_150719868
transcript_10358.known	chr1	-	1511	6	FSM	ENSG00000163159.15	ENST00000368892.9	1511	6	0	0	0	0	multi-exon	FALSE	canonical	1	321	junction_5	213.3678513741	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATCCTTGTATTGACCTT	-151182013	True	NA	-3	True	TATAAA	-24	NA	151190197	151176303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151177032_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_103584.known	chr3	+	671	4	FSM	ENSG00000240137.7	ENST00000475393.2	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.17726659862414	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAATGGACTCACAG	150703954	True	NA	21	True	AATAAA	-34	NA	150704002	150720156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150704063_150706926_150707172_150707931_150708010_150719868
transcript_103588.known	chr3	+	302	3	FSM	ENSG00000240137.7	ENST00000471093.6	539	3	78	159	78	-7	multi-exon	FALSE	canonical	3	7	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATCTGTCTGGTCGAG	150703341	False	NA	NA	False	TATAAA	-27	NA	150703563	150719988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_150703668_150707931_150708010_150719868
transcript_10359.known	chr1	-	1347	6	FSM	ENSG00000163159.15	ENST00000354473.4	1347	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	356.367563058144	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTGGTGTCCAGTCT	-151181974	True	NA	-12	True	AATAAA	-14	NA	151190158	151176461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151177065_151178000_151178146_151184316_151184494_151185505_151185621_151185797_151185951_151190004
transcript_103592.known	chr3	-	427	3	FSM	ENSG00000181788.4	ENST00000482706.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTGCCAGGGGCTGTC	-150763392	True	NA	NA	False	NA	NA	NA	150763431	150742487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150742699_150762432_150762571_150763353
transcript_103594.known	chr3	-	2087	3	FSM	ENSG00000163646.12	ENST00000327047.6	2087	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTCCCCTTAAATCAG	NA	False	NA	NA	False	NA	NA	NA	150972727	150926566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_150928202_150941581_150941762_150972455
transcript_103595.known	chr3	-	1493	3	FSM	ENSG00000138271.6	ENST00000260843.5	1493	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAATTCAAAGAACTAA	NA	False	NA	NA	False	AATAAA	-38	NA	151316820	151294085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_151295212_151300066_151300199_151316585
transcript_103597.known	chr3	+	1681	3	FSM	ENSG00000152601.18	ENST00000461436.1	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	15	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAATATGTAATTAAGCA	152267297	True	NA	NA	False	ATTAAA	-6	NA	152268905	152302449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_152269093_152299404_152300368_152301918
transcript_103600.known	chr3	-	2730	4	FSM	ENSG00000243069.9	ENST00000480639.6	2730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTTAAAAAGTGCCCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	154121347	154024414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154026643_154030276_154030380_154119685_154119809_154121071
transcript_103601.known	chr3	-	6723	25	FSM	ENSG00000174953.14	ENST00000496811.6	6723	25	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_22	74.5979501505683	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGATTCAGTGAATTT	-154312429	True	NA	NA	False	AATAAA	-39	NA	154324487	154272545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284582_154284670_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_103604.nic	chr3	-	1402	10	ISM	ENSG00000174953.14	ENST00000329463.9	2985	25	-106	24878	-35	2295	5prime_fragment	FALSE	canonical	3	234	junction_7	62.7412873298155	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAAGAAGCAATATA	NA	False	NA	NA	False	AATAGA	-10	NA	154324522	154301048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_103607.known	chr3	-	833	3	FSM	ENSG00000174953.14	ENST00000491011.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	1.5	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGATGTGCTTTGTTC	-154312193	False	NA	NA	False	ATTAAA	-12	NA	154324251	154314650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154315281_154316038_154316164_154324173
transcript_103609.known	chr3	-	3487	24	FSM	ENSG00000174953.14	ENST00000308361.10	3487	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	107.117746990062	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAACCTCTTGGATTGGTT	-154312402	True	NA	-35	True	AATAAA	-38	NA	154324460	154275667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_154276357_154276746_154276900_154277597_154277719_154280578_154280670_154280762_154280863_154283187_154283272_154284813_154284988_154288865_154288965_154289708_154289827_154292550_154292695_154293747_154293813_154295283_154295340_154299837_154299926_154300593_154300697_154300986_154301128_154303328_154303411_154304805_154304973_154305093_154305169_154306215_154306296_154309652_154309824_154311635_154311675_154315045_154315281_154316038_154316164_154324173
transcript_103610.known	chr3	+	5593	23	FSM	ENSG00000196549.13	ENST00000460393.6	5593	23	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	13.0479091767339	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079537	False	NA	8	True	AATAAA	-21	NA	155079671	155183704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155079757_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_103611.known	chr3	+	5552	23	FSM	ENSG00000196549.13	ENST00000675418.2	5552	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	13.857673829577	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAAACAAACGTTTTTA	155079919	False	NA	-18	True	AATACA	-2	NA	155079931	155183678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155080002_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_103614.known	chr3	+	5656	23	FSM	ENSG00000196549.13	ENST00000360490.7	5656	23	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	11.1244834590827	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTTATGCCTAGTCAA	155079683	True	NA	8	True	AATAAA	-21	NA	155080318	155183704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155080467_155084157_155084328_155085058_155085095_155114993_155115156_155116478_155116560_155116663_155116760_155116867_155116987_155118745_155118812_155138101_155138237_155140190_155140293_155141990_155142128_155142236_155142331_155143442_155143572_155144358_155144458_155147143_155147225_155148549_155148654_155160389_155160449_155166901_155167022_155168491_155168626_155168731_155168798_155172116_155172213_155172535_155172613_155180359
transcript_10363.known	chr1	+	3737	15	FSM	ENSG00000143398.20	ENST00000409426.5	3737	15	0	0	0	0	multi-exon	TRUE	canonical	3	175	junction_1	96.8155199229916	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAAACTTTAATGAGTT	151187459	True	NA	4	True	TATAAA	-20	NA	151198551	151249504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151199082_151224244_151224280_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_103653.nnic	chr3	-	1847	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	57	junction_1	352.996104794373	94	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTATCTTGTATTGAA	-155280557	False	NA	NA	False	AAAAAG	-8	NA	155280574	155249171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155249757_155250149_155250827_155258618_155258683_155278366_155278560_155280246
transcript_103656.nnic	chr3	-	1444	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAATGTAAGTATG	-155280629	False	NA	NA	False	AAAAAG	-9	NA	155280646	155250160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_10366.known	chr1	+	3800	16	FSM	ENSG00000143398.20	ENST00000368888.9	3800	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	181.289038707682	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTATTTTTTCTGATTC	151187459	True	NA	31	True	AATAAA	-20	NA	151198551	151249531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151199082_151224244_151224280_151224370_151224407_151227319_151227401_151231670_151231802_151232247_151232366_151232550_151232704_151234196_151234497_151236557_151236764_151238181_151238266_151239129_151239179_151239954_151240040_151242122_151242270_151242437_151242568_151246919_151246966_151247862
transcript_103661.nnic	chr3	-	1163	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	102	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-155280629	False	NA	-4	True	AATAAA	-17	NA	155280646	155250441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_103666.nnic	chr3	-	1098	5	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_2	321.899052499382	70	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155280629	False	NA	-25	True	ATTAAA	-28	NA	155280646	155250506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155265037_155265159_155278366_155278560_155280246
transcript_103682.nnic	chr3	-	1279	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	183	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAAAAATGTAAGTATG	-155280585	False	NA	NA	False	AAAAAG	-9	NA	155280602	155250160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_103687.nnic	chr3	-	998	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAAGACTGTAATCCCAG	-155280585	False	NA	-4	True	AATAAA	-17	NA	155280602	155250441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_103691.nnic	chr3	-	933	4	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	173	junction_2	351.130555017171	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155280585	False	NA	-25	True	ATTAAA	-28	NA	155280602	155250506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155278366_155278560_155280246
transcript_103700.nnic	chr3	-	683	3	Antisense	novelGene_ENSG00000241336.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	127	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCAGATGAACTACATAG	-155266193	True	NA	-25	True	ATTAAA	-28	NA	155280545	155250506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_155250827_155258618_155258683_155280246
transcript_103704.known	chr3	-	783	3	FSM	ENSG00000240045.2	ENST00000489090.2	783	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGTAAGACTGTGTG	NA	False	NA	NA	False	AATAAA	-17	NA	155293683	155290226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155290847_155290939_155291039_155293619
transcript_103708.known	chr3	-	3525	22	FSM	ENSG00000114805.18	ENST00000494598.5	3525	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	21.3599960933184	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTGAGTCCTACAGAGT	NA	False	NA	NA	False	AATAAA	-21	NA	155676416	155375579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155375790_155485355_155485711_155488027_155488108_155488659_155488807_155490783_155490869_155492728_155492854_155494140_155494249_155494337_155494518_155497319_155497418_155500702_155500795_155504554_155504627_155514722_155514885_155523896_155524005_155549786_155549959_155554075_155554197_155564914_155565119_155568230_155568325_155583471_155583643_155586064_155586195_155593940_155594185_155596231_155596379_155675996
transcript_103721.nnic	chr3	-	691	2	NNC	ENSG00000114805.18	novel	6417	23	NA	NA	-9	-253266	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAACTTTTCCCTTCCCTT	-155742387	True	NA	NA	False	ATTAAA	-30	NA	155745080	155744007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_155744458_155744839
transcript_103723.known	chr3	-	2404	7	FSM	ENSG00000169359.16	ENST00000359479.7	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	43.5446769294352	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTACATATGAAATGTGT	-155851395	True	NA	-12	True	AATAAA	-18	NA	155854429	155826525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155826820_155828181_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_103725.known	chr3	-	9266	6	FSM	ENSG00000169359.16	ENST00000643144.2	9266	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	27.7704879323357	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTTTTCATTTTTAT	-155851393	True	NA	NA	False	AATAAA	-13	NA	155854427	155821023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155842431_155842620_155853222
transcript_103729.known	chr3	-	1804	5	FSM	ENSG00000174928.16	ENST00000534941.2	1804	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	4.15331193145904	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCCAAAGTAGCTTTTTT	-155805907	True	NA	-11	True	AATAAA	-18	NA	155806272	155762617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155763919_155767508_155767670_155775700_155775849_155802531_155802592_155806138
transcript_103732.known	chr3	-	3558	5	FSM	ENSG00000169359.16	ENST00000468581.2	3558	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	56.8347384968032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTAACTCTTACATATGA	-155851382	True	NA	-19	True	AATAAA	-11	NA	155854416	155826532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155828378_155829687_155829904_155833467_155833586_155833856_155834042_155853222
transcript_103735.known	chr3	-	733	4	FSM	ENSG00000174928.16	ENST00000465810.1	733	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	23.0410262117139	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGGTGAAACGGTCAA	-155805894	True	NA	NA	False	CATAAA	-9	NA	155806259	155763527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155763919_155767508_155767670_155802531_155802592_155806138
transcript_103737.known	chr3	-	2734	4	FSM	ENSG00000169359.16	ENST00000646424.1	2734	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	69.0716214438961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGGCAGTACCATAATT	-155851412	True	NA	61	True	AGTAAA	-23	NA	155854446	155827268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155828378_155829687_155829904_155833856_155834042_155853222
transcript_103741.known	chr3	-	499	2	FSM	ENSG00000169359.16	ENST00000460729.1	499	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGACAGATCATTTGAGG	-155850328	False	3034	NA	False	NA	NA	NA	155853362	155844717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_155845077_155853222
transcript_103743.nnic	chr3	+	1061	3	FSM	ENSG00000286585.2	ENST00000692713.1	1489	3	-120	548	-109	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	155854642	155863191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155855079_155858251_155858333_155862647
transcript_103744.known	chr3	+	852	3	FSM	ENSG00000286585.2	ENST00000653103.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGTGTGA	155854669	True	NA	NA	False	AATAAA	-14	NA	155854751	155863191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155854979_155858251_155858333_155862647
transcript_103747.known	chr3	+	8631	16	FSM	ENSG00000163655.16	ENST00000496455.7	8631	16	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_10	102.65865769627	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACAGACTTATGTGACTT	155861966	True	NA	4	True	ATTAAA	-17	NA	155870649	155944020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155870898_155893517_155893700_155897926_155898042_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_103750.known	chr3	+	2024	14	FSM	ENSG00000163655.16	ENST00000295920.7	2024	14	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	263.459101617029	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTACCGTGTGCAGTTTA	155861966	True	NA	-3	True	AATAAA	-15	NA	155870649	155937710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_155870898_155903862_155903961_155906159_155906264_155910691_155910886_155911113_155911280_155914418_155914571_155916018_155916193_155919232_155919339_155922186_155922303_155925240_155925367_155931764_155931881_155934915_155935047_155936337_155936511_155937590
transcript_103759.known	chr3	-	807	5	FSM	ENSG00000114850.7	ENST00000476217.5	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	520.651034763209	4267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGTACTAGGACGTTT	-156531878	True	NA	-5	True	ATTAAA	-17	NA	156555125	156543003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156543270_156544293_156544440_156548904_156549004_156553654_156553782_156554956
transcript_103760.known	chr3	-	1039	5	FSM	ENSG00000114850.7	ENST00000467789.5	1039	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	525.159499580842	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTACAACTTCTTTTGA	-156531902	True	NA	NA	False	NA	NA	NA	156555149	156542820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156543270_156544307_156544440_156548865_156549004_156553654_156553782_156554956
transcript_103761.known	chr3	-	873	4	FSM	ENSG00000114850.7	ENST00000467733.1	873	4	0	0	0	0	multi-exon	FALSE	canonical	3	1143	junction_1	78.8712030253544	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATGGCCAATGCAGTTA	-156531870	True	NA	NA	False	NA	NA	NA	156555117	156543953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156544440_156548904_156549004_156553654_156553782_156554956
transcript_103764.known	chr3	-	554	2	FSM	ENSG00000243926.3	ENST00000478005.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGTCTTCTAGGCTCTA	-156673756	False	NA	NA	False	AATAAA	-15	NA	156673933	156671863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156672131_156673646
transcript_103765.known	chr3	-	509	2	FSM	ENSG00000243926.3	ENST00000664429.2	512	2	0	3	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCTTCTAGGCTCTACC	-156674269	True	NA	NA	False	AATAAA	-17	NA	156674446	156671861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156672131_156674206
transcript_103769.known	chr3	-	533	3	FSM	ENSG00000240875.6	ENST00000654528.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCCAAGTATGAGTAATT	NA	False	NA	NA	False	AATAAA	-12	NA	156751655	156747353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156747564_156751094_156751184_156751421
transcript_103770.known	chr3	-	3215	3	FSM	ENSG00000240875.6	ENST00000488584.2	3215	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGTACAATATTTATTCAA	-156751450	True	NA	NA	False	NA	NA	NA	156751525	156747392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_156750415_156751094_156751184_156751421
transcript_103771.known	chr3	+	1020	3	FSM	ENSG00000241135.7	ENST00000654705.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTATTTTGTTATGG	NA	False	NA	NA	False	AATAAA	-24	NA	157089656	157101140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157090123_157099482_157099582_157100685
transcript_103772.known	chr3	-	2322	11	FSM	ENSG00000163660.12	ENST00000295926.8	2322	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	34.9651254824003	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTTGCTTTTGAATGG	-157152746	True	NA	NA	False	ATTAAA	-29	NA	157160147	157147552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157148590_157149286_157149386_157149484_157149597_157149835_157149978_157150064_157150170_157150281_157150382_157152176_157152242_157153035_157153157_157158865_157158976_157159404_157159480_157159791
transcript_103773.known	chr3	-	753	3	FSM	ENSG00000163660.12	ENST00000471044.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	9.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGAGGCAGTTGCATTTA	-157152757	True	NA	NA	False	AAAAAG	-29	NA	157160158	157158664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157158976_157159404_157159480_157159791
transcript_103777.known	chr3	+	3537	2	FSM	ENSG00000243176.7	ENST00000667900.1	3537	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATCAGTCTTTTTTTTTT	NA	False	NA	-1	True	AATACA	-11	NA	157174200	157177930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157174556_157174748
transcript_103784.known	chr3	-	992	4	FSM	ENSG00000197415.12	ENST00000537559.5	992	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	11.8977121983832	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTTGTCTTCTTTTA	-157495464	False	NA	-1	True	AATGAA	-30	NA	157495506	157459620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_157459927_157460180_157460356_157470313_157470530_157495211
transcript_103785.known	chr3	+	1884	3	FSM	ENSG00000163661.4	ENST00000295927.4	1884	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTACTTTTCTCTTTTCA	157436816	True	NA	NA	False	TATAAA	-24	NA	157436849	157443633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157437064_157437512_157437915_157442365
transcript_103789.known	chr3	+	1201	5	FSM	ENSG00000174899.13	ENST00000651325.1	1201	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	7.59522876548166	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTTGATAAAAGTGAG	157543005	True	NA	NA	False	AATAAA	-19	NA	157543245	157578885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157571954_157572044_157578278
transcript_103792.known	chr3	+	1484	5	FSM	ENSG00000174899.13	ENST00000651329.1	1484	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.2915619758885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAACACGAGATAATGTT	157543156	False	NA	NA	False	AGTAAA	-24	NA	157543396	157601233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157571954_157572044_157600192
transcript_103793.known	chr3	+	850	4	FSM	ENSG00000174899.13	ENST00000650979.1	850	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.37987005998436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAATTAACACATCTTAG	157543136	True	NA	NA	False	GATAAA	-31	NA	157543376	157578754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157571176_157571307_157578278
transcript_103795.known	chr3	+	883	3	FSM	ENSG00000174899.13	ENST00000468043.6	920	3	32	5	4	-5	multi-exon	FALSE	canonical	2	7	junction_2	7.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATGTTGAATTCCTTTT	157543103	True	NA	NA	False	AATAAA	-26	NA	157543343	157569912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157553229_157553341_157569306
transcript_103796.known	chr3	+	700	2	FSM	ENSG00000174899.13	ENST00000498159.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATTAAGATATACAAATC	157543099	True	NA	NA	False	AATATA	-41	NA	157543339	157569836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_157543510_157569306
transcript_103800.known	chr3	+	1607	10	FSM	ENSG00000174891.14	ENST00000476899.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.6032012894673	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	158107222	True	NA	-89	True	AATAAA	-3	NA	158110076	158544734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461010_158537091_158537199_158543334_158543488_158544182
transcript_103803.known	chr3	+	2597	10	FSM	ENSG00000174891.14	ENST00000611884.5	2597	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	11.842588972866	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGATTTGTGTGGTTTTT	158107234	True	NA	NA	False	AATAAA	-16	NA	158110088	158545730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_103810.known	chr3	+	1443	9	FSM	ENSG00000174891.14	ENST00000312179.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.3847096529504	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTGAAACTTAAATAAAT	158107251	True	NA	-30	True	NA	NA	NA	158110105	158544793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110198_158122102_158122299_158123865_158123992_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_103815.known	chr3	+	1727	10	FSM	ENSG00000174891.14	ENST00000295930.7	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.79795897113271	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTACTAGATGCTCCTT	NA	False	NA	12	True	AATAAA	-24	NA	158110051	158544835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_103818.known	chr3	+	2677	9	FSM	ENSG00000174891.14	ENST00000482822.3	2677	9	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.5243512806053	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACTAAACATGCCAGAGA	158107220	True	NA	NA	False	NA	NA	NA	158110074	158545101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334
transcript_103821.known	chr3	+	1757	7	FSM	ENSG00000174891.14	ENST00000684683.1	1757	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	11.6571389666971	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAACCAAGCGAAAAAA	158107234	True	NA	NA	False	NA	NA	NA	158110088	158461983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_103824.known	chr3	+	769	7	FSM	ENSG00000174891.14	ENST00000471994.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	14.2058282249067	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAGAAATGAGGAAGAAG	158107213	True	NA	NA	False	NA	NA	NA	158110067	158460962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203246_158298038_158298076_158354856_158354909_158460934
transcript_103835.known	chr3	+	1069	4	FSM	ENSG00000174891.14	ENST00000684156.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	14.8174071805952	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTATTGTTTAAGCCTT	158107234	True	NA	NA	False	TATAAA	-29	NA	158110088	158203695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110212_158122102_158122299_158123865_158123992_158203071
transcript_103837.known	chr3	+	7727	4	FSM	ENSG00000174891.14	ENST00000683394.1	7727	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	18.0800688297608	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGCAAAATTTATTGAAAAA	158107234	True	NA	NA	False	NA	NA	NA	158110088	158210341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071
transcript_103840.known	chr3	+	1641	10	FSM	ENSG00000174891.14	ENST00000682221.1	1641	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.5301527728983	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACCCTAAACAATGTAAGC	158107218	True	NA	-89	True	AATAAA	-3	NA	158110072	158544734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158110224_158122102_158122299_158123865_158123992_158203071_158203270_158298038_158298076_158354856_158354909_158460934_158461004_158537091_158537199_158543334_158543488_158544182
transcript_103841.known	chr3	+	1221	8	FSM	ENSG00000178053.20	ENST00000650750.1	1221	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	234.363227595499	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTGAGTCTATTTAAT	158566984	True	NA	20	True	AATAAA	-23	NA	158571205	158605402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158592433_158592582_158596348_158596424_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_103843.known	chr3	+	1247	8	FSM	ENSG00000178053.20	ENST00000484955.5	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	231.673063093803	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566951	True	NA	15	True	AATAAA	-18	NA	158571172	158605397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158588851_158588925_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_103846.known	chr3	+	2222	7	FSM	ENSG00000178053.20	ENST00000359117.9	2222	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	154.502067587747	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566962	True	NA	4	True	AATAAA	-16	NA	158571183	158606456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_103850.known	chr3	+	992	6	FSM	ENSG00000178053.20	ENST00000491767.6	992	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	203.224014329016	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGTAAATTGAGTCTAT	158566941	True	NA	15	True	AATAAA	-18	NA	158571162	158605397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571348_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_103851.known	chr3	+	1959	6	FSM	ENSG00000178053.20	ENST00000619577.5	1959	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	200.44809802041	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGACTATGTTCATACT	158566969	True	NA	NA	False	AGTAAA	-3	NA	158571190	158606348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571392_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_103854.known	chr3	+	2168	7	FSM	ENSG00000178053.20	ENST00000355893.11	2168	7	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_1	41.6949903732118	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTGTTGAAATTGAGCA	158566972	True	NA	4	True	AATAAA	-16	NA	158571193	158606456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158571348_158592433_158592582_158596861_158596946_158598079_158598209_158600013_158600174_158602806_158602940_158605096
transcript_103856.known	chr3	+	3453	19	FSM	ENSG00000168827.15	ENST00000264263.9	3453	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	146.371725749085	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTCCTTTGCTTTTCTTG	158637361	True	NA	12	True	AATAAA	-13	NA	158644596	158692569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158650004_158650062_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_103860.known	chr3	+	6478	18	FSM	ENSG00000168827.15	ENST00000486715.6	6478	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.9306142505249	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTGGATTATGGATGT	158637291	True	NA	17	True	AATAAA	-30	NA	158644526	158695581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_103864.known	chr3	+	2147	14	FSM	ENSG00000168827.15	ENST00000478576.5	2147	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	104.884213420572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTTGTAGTAGTTCTTA	158637292	True	NA	NA	False	AATAAA	-25	NA	158644527	158682433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652247_158653309_158653468_158654546_158654632_158658921_158659060_158660873_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994
transcript_103868.known	chr3	+	3470	18	FSM	ENSG00000168827.15	ENST00000478254.5	3470	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	100.333423382993	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTTGCTTTTCTTGACT	158637292	True	NA	15	True	AATAAA	-16	NA	158644527	158692572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158644716_158645628_158645782_158646164_158646298_158646742_158646948_158649040_158649158_158652095_158652251_158653313_158653468_158654546_158654632_158658921_158659071_158660882_158660976_158662627_158662685_158665336_158665475_158666303_158666387_158681994_158682158_158684523_158684669_158690162_158690324_158691138_158691193_158691335
transcript_103869.known	chr3	-	1071	6	FSM	ENSG00000079257.8	ENST00000264265.4	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	11.3030969207558	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTAATTACGTTGCA	-158671946	True	NA	-1	True	AATAAA	-21	NA	158672648	158666413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_158666745_158667011_158667075_158668995_158669133_158669432_158669611_158670956_158671020_158672349
transcript_103870.known	chr3	+	1594	16	FSM	ENSG00000118855.21	ENST00000264266.12	1594	16	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	8.67691701521277	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCAAAGTGTATTTGTG	158801049	True	NA	NA	False	AATATA	-3	NA	158802090	158829116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158802316_158804318_158804372_158805361_158805475_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_103874.known	chr3	+	2117	15	FSM	ENSG00000118855.21	ENST00000651862.1	2117	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.9774553976634	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTCTTCTTTTGATT	158801012	True	NA	11	True	ATTAAA	-18	NA	158802053	158829719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_158802316_158804322_158804372_158807039_158807083_158807395_158807464_158809178_158809288_158813964_158814068_158819648_158819748_158820214_158820327_158821596_158821654_158821983_158822141_158823427_158823526_158824123_158824237_158826014_158826063_158827279_158827338_158828978
transcript_103876.known	chr3	-	839	4	FSM	ENSG00000118849.10	ENST00000479756.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCAAGTATTGTTTCAG	-158732424	True	NA	NA	False	AATAAA	-18	NA	158732442	158704650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_158704928_158710737_158710934_158713796_158713860_158732139
transcript_103885.known	chr3	+	1645	7	FSM	ENSG00000151967.18	ENST00000445224.6	1645	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	25.9293913027925	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATATGTCTTTTTGCTCA	NA	False	NA	12	True	AATAAA	-20	NA	159839860	159897360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707_159887906_159888819_159888944_159892096_159892191_159896722
transcript_103890.known	chr3	+	1000	4	FSM	ENSG00000151967.18	ENST00000495954.5	1000	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	62.9567752950829	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGAATGTTGACTAC	159839796	True	NA	NA	False	NA	NA	NA	159839939	159897234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_159840215_159866162_159866282_159892096_159892191_159896722
transcript_103891.known	chr3	+	765	4	FSM	ENSG00000151967.18	ENST00000472483.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.290634073484	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGATTGATGTCTACTG	159840038	False	NA	NA	False	AGTAAA	-6	NA	159840098	159888119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_159840215_159866162_159866282_159886206_159886325_159887707
transcript_103892.known	chr3	+	1444	7	FSM	ENSG00000168811.7	ENST00000305579.7	1444	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.70782512765993	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAATTTTTCTAATGT	159988755	True	NA	NA	False	AATAAA	-19	NA	159988834	159996019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_159989175_159990166_159990313_159993011_159993126_159993450_159993493_159993567_159993610_159993700_159993845_159995403
transcript_103894.nic	chr3	-	822	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	-75	3077	-75	71	multi-exon	FALSE	canonical	3	41	junction_1	2.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTAACGGCTCTCTGT	-160444805	True	NA	NA	False	NA	NA	NA	160449861	160438579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_103895.known	chr3	-	3073	21	FSM	ENSG00000068885.15	ENST00000496589.5	3073	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_19	26.4988679003462	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACCATTAATTTC	-160399110	False	NA	-3	True	AATAAA	-19	NA	160399273	160258179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_103898.known	chr3	-	3999	20	FSM	ENSG00000068885.15	ENST00000326448.12	3999	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	27.5762353025681	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTCATATCCTAGAATT	-160398006	True	NA	-2	True	AATAAA	-33	NA	160399225	160256985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160258636_160268412_160268537_160277305_160277479_160277580_160277671_160279192_160279365_160280666_160280815_160282477_160282614_160285803_160285869_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_103903.nic	chr3	-	1885	14	NIC	ENSG00000068885.15	novel	860	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	33.215808598142	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGAGTTGTCTATGC	-160398034	True	NA	-8	True	AATAAA	-24	NA	160399253	160299078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381719_160383436_160383505_160384405_160384647_160399145
transcript_103909.nic	chr3	-	1665	13	NIC	ENSG00000068885.15	novel	860	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_11	36.0542608053781	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTATGAGTTGTCTATGC	-160398034	True	NA	-8	True	AATAAA	-24	NA	160399253	160299078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_160299275_160300882_160301047_160303914_160303990_160307662_160307782_160319759_160319940_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_103916.nnic	chr3	-	1252	9	NNC	ENSG00000068885.15	novel	860	8	NA	NA	-6	-13644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.1606390800783	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTCACAACGTGTTTT	-160398034	True	NA	NA	False	TATAAA	-16	NA	160399253	160333476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_160333798_160356012_160356151_160357488_160357579_160366042_160366153_160375811_160375881_160377429_160377541_160381502_160381725_160384563_160384647_160399145
transcript_103923.known	chr3	+	5116	24	FSM	ENSG00000113810.16	ENST00000357388.8	5116	24	0	0	0	0	multi-exon	TRUE	canonical	3	283	junction_1	98.9819635667589	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGGAAATTCAAGTACGG	160394146	True	NA	14	True	AATAAA	-17	NA	160399649	160434953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_160399750_160400821_160400966_160401914_160402094_160402675_160402868_160404327_160404505_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250_160416416_160417722_160417957_160419357_160419544_160420739_160420902_160423424_160423651_160423760_160423841_160424866_160425020_160426073_160426201_160428752_160428943_160430598_160430744_160431031_160431206_160431642_160431826_160432282_160432516_160433025_160433210_160433656
transcript_103926.nnic	chr3	+	726	6	NNC	ENSG00000113810.16	novel	1971	14	NA	NA	-2	-60	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	141.563554631833	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAAAATTAAAGGA	160394132	True	NA	34	True	AAAAAG	-6	NA	160399635	160416343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_160399684_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250
transcript_103927.nnic	chr3	+	740	6	NIC	ENSG00000113810.16	novel	1971	14	NA	NA	-2	-60	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	141.164584793779	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAAAAAATTAAAGGA	160394132	True	NA	34	True	AAAAAG	-6	NA	160399635	160416343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_160399698_160411919_160412085_160412325_160412454_160413472_160413614_160414366_160414518_160416250
transcript_103936.known	chr3	-	603	3	FSM	ENSG00000213186.8	ENST00000496222.1	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	18	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGACACACACTGGAC	-160444704	True	NA	-40	True	AAGAAA	-30	NA	160449760	160438730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449683
transcript_103937.known	chr3	-	3824	3	FSM	ENSG00000213186.8	ENST00000309784.9	3824	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	2.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCACTGTCTTAATGAGA	-160444730	True	NA	-2	True	AATAAA	-18	NA	160449786	160435502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449716
transcript_103938.known	chr3	-	577	3	FSM	ENSG00000213186.8	ENST00000494486.1	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	17.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAATTAGTTTGTGGTC	-160449581	False	NA	NA	False	ATTAAA	-19	NA	160449613	160438848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449444
transcript_103947.known	chr3	-	860	3	FSM	ENSG00000213186.8	ENST00000479460.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGGCGATAAGGAAGCTG	-160449693	False	NA	40	True	NA	NA	NA	160449725	160438650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160439187_160448725_160448796_160449471
transcript_103953.known	chr3	+	401	2	FSM	ENSG00000113810.16	ENST00000467263.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCCTTGCATCCAGTT	160412291	True	NA	NA	False	NA	NA	NA	160412334	160413754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_160412454_160413472
transcript_103954.known	chr3	-	8952	17	FSM	ENSG00000186432.10	ENST00000334256.9	8952	17	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_12	21.5876664730119	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAATTTCTCAGATGAACT	-160563591	True	NA	-16	True	AATAAA	-16	NA	160565571	160495006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160502203_160504957_160505053_160508106_160508270_160509799_160509872_160514076_160514182_160515451_160515581_160521778_160521911_160525799_160525845_160525937_160526108_160527952_160528040_160530854_160530941_160531461_160531558_160535512_160535566_160535660_160535691_160535807_160535898_160536795_160536841_160565213
transcript_103955.known	chr3	-	790	2	FSM	ENSG00000186432.10	ENST00000469804.1	790	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACACGCATACCCACACACC	-160563591	True	NA	NA	False	AATACA	-9	NA	160565571	160564208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160564641_160565213
transcript_103958.known	chr3	-	1715	1	FSM	ENSG00000260572.1	ENST00000566372.1	1715	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTATAGGCATTTTCTTAC	-160755131	True	NA	NA	False	AATAAA	-18	NA	160755142	160753427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_160753400_160755100
transcript_103961.known	chr3	+	3028	16	FSM	ENSG00000169251.13	ENST00000351193.7	3028	16	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	42.8908692691891	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	161216001	True	NA	31	True	AATAAA	-32	NA	161221310	161252307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_103965.nic	chr3	+	2973	16	NIC	ENSG00000169251.13	novel	3028	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	98.6713061972257	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCGCATTGGTGTCATAT	161215978	True	NA	31	True	AATAAA	-32	NA	161221287	161252307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121_161235213_161238112_161238192_161238729_161238827_161241045_161241164_161242507_161242654_161246335_161246449_161247257_161247331_161249453_161249561_161250255_161250327_161250779
transcript_103973.nic	chr3	+	857	7	ISM	ENSG00000169251.13	ENST00000351193.7	3028	16	-42	16976	7	0	5prime_fragment	FALSE	canonical	3	307	junction_1	46.6821402917885	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAACAACT	NA	False	NA	NA	False	NA	NA	NA	161221268	161235331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726_161234856_161235121
transcript_103975.nic	chr3	+	1138	6	ISM	ENSG00000169251.13	ENST00000351193.7	3028	16	-42	16961	7	15	intron_retention	FALSE	canonical	3	307	junction_1	50.2529601118183	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTTAATTCTTTATCTGC	NA	False	NA	NA	False	NA	NA	NA	161221268	161235346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_161221410_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_103976.known	chr3	+	600	6	FSM	ENSG00000169251.13	ENST00000473909.5	600	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	157.410800137729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTATAACTTTTCCTTC	161215978	True	NA	NA	False	NA	NA	NA	161221287	161234905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_161221332_161221993_161222058_161224929_161225065_161227246_161227344_161233398_161233480_161234726
transcript_103978.known	chr3	-	584	6	FSM	ENSG00000169255.15	ENST00000460353.2	584	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	18.8933850857913	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATGTGGTACCTCAGC	-161104784	True	NA	NA	False	NA	NA	NA	161105303	161086663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161089943_161090063_161101138_161101234_161103426_161103515_161104318_161104407_161105234
transcript_103979.known	chr3	-	552	6	FSM	ENSG00000169255.15	ENST00000484127.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	19.4668949758301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGATAGAACGCGTGAAC	-161104742	False	NA	NA	False	NA	NA	NA	161105261	161086630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161101138_161101234_161103112_161103206_161103426_161103518_161104318_161104407_161105234
transcript_103981.known	chr3	-	572	5	FSM	ENSG00000169255.15	ENST00000473142.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.6999472573253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAGACTTTCACTTCA	-161104779	False	NA	NA	False	NA	NA	NA	161105298	161086578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161089943_161090063_161103426_161103518_161104318_161104407_161105234
transcript_103982.known	chr3	-	3256	5	FSM	ENSG00000169255.15	ENST00000651686.1	3256	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8.45576726264388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTGTATTTACTTTT	-161104819	True	NA	-25	True	AATAAA	-7	NA	161105338	161083907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161086789_161101138_161101234_161103426_161103515_161104318_161104407_161105234
transcript_103986.known	chr3	-	880	4	FSM	ENSG00000196542.9	ENST00000497137.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.5784881201135	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTAACAGACCTACCAGAA	-161371485	False	NA	NA	False	AATAGA	-2	NA	161371501	161345774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161346356_161347964_161348104_161359801_161359895_161371434
transcript_103987.known	chr3	-	3103	3	FSM	ENSG00000196542.9	ENST00000359175.9	3094	3	0	-9	0	6	multi-exon	FALSE	canonical	0	0	junction_1	51.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGATTTACTTTTTAT	-161372835	True	NA	NA	False	AATAAA	-25	NA	161372880	161344791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161346356_161359801_161359895_161371434
transcript_103989.known	chr3	-	679	2	FSM	ENSG00000196542.9	ENST00000497374.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATAAGCATTTAATTA	-161371501	False	NA	NA	False	AATATA	-3	NA	161371517	161359298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161359895_161371434
transcript_103992.known	chr3	-	471	1	FSM	ENSG00000234851.4	ENST00000471152.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2737	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	-161429557	True	NA	-66	True	NA	NA	NA	161429597	161429126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_161429100_161429600
transcript_103993.known	chr3	+	248	2	FSM	ENSG00000269888.1	ENST00000602890.1	248	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	814	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGCTGTGTTTTAAGGTA	161429096	False	NA	NA	False	NA	NA	NA	161429111	161429613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_161429210_161429463
transcript_103994.known	chr3	-	4391	2	FSM	ENSG00000121871.4	ENST00000241274.3	4391	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATACATTATATATAGAGGA	-165196836	False	NA	NA	False	AATAAA	-18	NA	165196852	165186721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_165190852_165196591
transcript_10400.known	chr1	+	1319	10	FSM	ENSG00000159352.16	ENST00000368884.8	1319	10	0	0	0	0	multi-exon	FALSE	canonical	3	2307	junction_1	219.335415953188	5918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATGGTTTTGAGTGTG	151238430	True	NA	41	True	AATAAA	-34	NA	151254733	151267479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151254809_151262160_151262302_151263913_151264029_151264831_151264919_151265165_151265235_151265393_151265610_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_104004.known	chr3	-	2405	4	FSM	ENSG00000114200.10	ENST00000264381.8	2405	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	3.74165738677394	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTCTTTGTTTTTTAT	-165837213	True	NA	NA	False	ATTAAA	-18	NA	165837423	165772903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_165773507_165786144_165786312_165829516_165831042_165837313
transcript_104006.known	chr3	-	702	3	FSM	ENSG00000114200.10	ENST00000479451.5	702	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCAGTGCTCTGCTTTTA	-165837210	True	NA	4	True	AATAAA	-22	NA	165837420	165773078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_165773507_165786144_165786312_165837313
transcript_10401.known	chr1	+	703	6	FSM	ENSG00000159352.16	ENST00000445776.1	703	6	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	1062.57543732198	896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGCTTCAAATATTGAT	151264861	True	NA	28	True	AATAAA	-21	NA	151264887	151267466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151264919_151265165_151265235_151266003_151266113_151266307_151266440_151266519_151266588_151267172
transcript_104011.known	chr3	-	573	5	FSM	ENSG00000169064.13	ENST00000473888.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.21416340365355	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACTCTTAGAGAATTTT	NA	False	NA	NA	False	AAGAAA	-27	NA	167381346	167368455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167368575_167372833_167372951_167379637_167379793_167380246_167380406_167381323
transcript_10402.known	chr1	+	649	4	FSM	ENSG00000159352.16	ENST00000427779.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1342.44726774152	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTTTGCTTCAAAT	151265946	True	NA	22	True	AATAAA	-15	NA	151266037	151267460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151266199_151266307_151266440_151266519_151266588_151267172
transcript_104024.known	chr3	-	849	9	FSM	ENSG00000114209.15	ENST00000475915.6	849	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	555.484346651641	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACTTCAGACCTTCAAAA	-167734467	False	NA	NA	False	AATAAA	-43	NA	167734510	167684338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734458
transcript_104025.known	chr3	-	1360	9	FSM	ENSG00000114209.15	ENST00000473645.6	1360	9	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_8	471.3283754454	784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACATTTCTTTACTTGAA	-167734896	False	NA	-10	True	AATAAA	-15	NA	167734939	167683909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167725400_167725474_167734805
transcript_104027.known	chr3	-	1026	9	FSM	ENSG00000114209.15	ENST00000470131.5	1026	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	611.938671355227	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGTAAATTTTAAAGTT	-167719863	True	NA	NA	False	NA	NA	NA	167734892	167684255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734213_167734346_167734805
transcript_104035.known	chr3	-	934	8	FSM	ENSG00000114209.15	ENST00000461494.5	934	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	505.19634493806	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTTGACTGTATAAATT	-167734501	False	NA	NA	False	NA	NA	NA	167734544	167684241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734431
transcript_104037.known	chr3	-	1276	8	FSM	ENSG00000114209.15	ENST00000497056.6	1276	8	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_7	124.925120429342	1910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAACATTTCTTTACTTG	-167734887	False	NA	-12	True	AATAAA	-13	NA	167734930	167683911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_167684390_167687233_167687317_167687614_167687694_167695595_167695723_167697008_167697127_167704841_167704896_167720061_167720274_167734805
transcript_104052.known	chr3	+	1600	9	FSM	ENSG00000163536.13	ENST00000446050.7	1600	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	7.51560875777871	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATCTATTTTTTTATTT	167735037	True	NA	20	True	AATAAA	-21	NA	167735720	167825569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_167735824_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_104057.known	chr3	+	1907	9	FSM	ENSG00000163536.13	ENST00000295777.9	1907	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.4386652174174	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTAGATCTATTTTTTTA	167735039	True	NA	17	True	AATAAA	-18	NA	167735722	167825566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_167736136_167789110_167789379_167790371_167790603_167792589_167792785_167794619_167794825_167807243_167807342_167822985_167823073_167824472_167824563_167825246
transcript_104059.known	chr3	+	509	3	FSM	ENSG00000206120.11	ENST00000491953.5	509	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTTTTTCCTGCTATA	NA	False	NA	NA	False	AATAAA	-18	NA	168812294	168824985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_168812486_168821192_168821328_168824802
transcript_104061.nnic	chr3	-	641	3	NNC	ENSG00000085276.19	novel	5462	17	NA	NA	-21	-102355	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	92	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-169663086	True	NA	NA	False	AATAAA	-16	NA	169663733	169483613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_169483710_169483815_169483963_169663335
transcript_104064.nnic	chr3	-	300	2	Genic_Genomic	ENSG00000213178.3	novel	410	1	NA	NA	61	57	multi-exon	FALSE	canonical	3	201	junction_1	0	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	169484019	169483613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_-_169483710_169483815
transcript_104065.known	chr3	-	410	1	FSM	ENSG00000213178.3	ENST00000418623.1	410	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4846	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTCATTTATCTGGAAAAT	NA	False	NA	NA	False	NA	NA	NA	169484080	169483670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169483700_169484100
transcript_104066.known	chr3	-	438	1	FSM	ENSG00000277925.1	ENST00000363312.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCGCTTTCCTGTTGGTG	-169759762	True	NA	-4	True	NA	NA	NA	169765047	169764609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169764600_169765000
transcript_104067.known	chr3	-	1671	2	FSM	ENSG00000184378.3	ENST00000330368.3	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTATGTATGTATT	-169769316	True	NA	-12	True	AATAGA	-19	NA	169769561	169766920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169768351_169769320
transcript_104075.known	chr3	+	2833	9	FSM	ENSG00000085274.16	ENST00000356716.8	2833	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	75.7585597473975	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAAGAATTTTCTAGATA	169771450	True	NA	0	True	AATAAA	-11	NA	169773426	169787544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169773463_169774030_169774098_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_104085.known	chr3	+	4969	8	FSM	ENSG00000085274.16	ENST00000349841.10	4969	8	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	53.3819506299763	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGCCCACCTCAGCCTC	169771419	True	NA	NA	False	NA	NA	NA	169773395	169789716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169773463_169774264_169774562_169778767_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_104090.known	chr3	+	2630	8	FSM	ENSG00000085274.16	ENST00000602751.5	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	83.1794224945726	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTCCTGTTATGCACT	169771428	True	NA	-42	True	NA	NA	NA	169773404	169787502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169773463_169774264_169774562_169778883_169779562_169780589_169780750_169782464_169782644_169783476_169783561_169784621_169784709_169786415
transcript_104097.known	chr3	-	2383	11	FSM	ENSG00000171757.17	ENST00000446859.7	2383	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	12.1326007104825	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTGTCTGGCTTCTTT	-169812548	True	NA	NA	False	TATAAA	-23	NA	169812904	169793002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
transcript_104098.known	chr3	-	1781	11	FSM	ENSG00000171757.17	ENST00000522830.5	1781	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	12.8918578955867	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-169812576	True	NA	5	True	ATTAAA	-28	NA	169812932	169793472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169793839_169795484_169795612_169796213_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_104099.known	chr3	-	1475	9	FSM	ENSG00000171757.17	ENST00000522080.5	1475	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	6.24374687187109	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATCTAATTAGAAAACTAA	-169812169	False	NA	NA	False	TATAAA	-45	NA	169812525	169795779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812409
transcript_10410.known	chr1	-	637	2	FSM	ENSG00000232671.7	ENST00000660511.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAACACGCTTTGTAAAG	-151281827	True	NA	-3	True	ATTAAA	-12	NA	151281950	151280029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151280259_151281542
transcript_104100.known	chr3	-	3787	9	FSM	ENSG00000171757.17	ENST00000522596.6	3787	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	8.70972875582242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGTAGGGTAATTTTTTA	-169812334	False	356	5	True	ATTAAA	-28	NA	169812690	169793472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_169796370_169796744_169796900_169800658_169800755_169804052_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_104103.nic	chr3	-	823	6	ISM	ENSG00000171757.17	ENST00000522830.5	1781	11	5	10633	5	-135	5prime_fragment	FALSE	canonical	3	20	junction_5	10.9068785635488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGCAAATTAATTCATCA	-169812571	True	NA	0	True	AATAAA	-23	NA	169812927	169804105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_169804182_169806847_169806932_169807425_169807491_169807587_169807710_169808627_169808746_169812569
transcript_104116.known	chr3	+	6526	8	FSM	ENSG00000008952.17	ENST00000337002.9	6526	8	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_4	197.339963576793	8202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTATTTTATGTAT	169952885	True	NA	6	True	AATAAA	-22	NA	169966806	169998373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593
transcript_104117.known	chr3	+	508	5	FSM	ENSG00000008952.17	ENST00000487736.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	726.11466036708	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAGAGAA	169952892	True	NA	65	True	TATAAA	-11	NA	169966813	169982857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169966859_169969286_169969384_169975607_169975717_169976945_169977052_169982706
transcript_104118.known	chr3	+	1430	9	FSM	ENSG00000008952.17	ENST00000480708.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_8	424.6282933343	5108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTATTTAGATATTTCT	169952886	True	NA	20	True	AATAAA	-21	NA	169966807	169993831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_169966859_169975607_169975717_169976945_169977052_169982706_169982912_169983160_169983254_169985804_169985866_169988239_169988360_169992593_169993102_169993654
transcript_10412.known	chr1	-	307	2	FSM	ENSG00000232671.7	ENST00000494138.5	397	2	90	0	49	0	multi-exon	FALSE	canonical	1	2	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTTTGTAAAGTAATTG	-151281870	False	NA	3	True	ATTAAA	-18	NA	151281880	151280023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151280259_151281808
transcript_104128.known	chr3	+	1299	5	FSM	ENSG00000173890.17	ENST00000492492.5	1299	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	211.066340281912	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAATATTATTAAATAT	170033726	True	NA	NA	False	NA	NA	NA	170038137	170084071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170038216_170038914_170039044_170077122_170077924_170079773_170079898_170083904
transcript_10413.known	chr1	-	1150	3	FSM	ENSG00000143393.17	ENST00000438243.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATAAGTCTCAGCAGCA	-151327358	False	NA	NA	False	NA	NA	NA	151327377	151315639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151316510_151324744_151324918_151327270
transcript_104142.known	chr3	+	1962	4	FSM	ENSG00000173890.17	ENST00000355897.10	1962	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	59.3820025110489	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGTAAAAATTGTTCTTA	170037096	True	NA	5	True	ATTAAA	-18	NA	170037994	170085392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170038216_170038914_170039044_170079773_170079898_170083904
transcript_104158.known	chr3	-	5030	15	FSM	ENSG00000173889.16	ENST00000494943.5	5030	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_14	11.1833057067493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTCTATAATGAGTTTT	-170179440	True	NA	-10	True	ATTAAA	-17	NA	170181733	170095220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170097385_170102478_170102711_170102801_170102935_170106831_170106947_170113359_170113520_170117225_170117477_170122590_170122745_170128683_170129553_170136418_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181686
transcript_104159.known	chr3	-	772	7	FSM	ENSG00000173889.16	ENST00000475729.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9.26762584963856	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTAGTCAAACTCAGTCA	-170179452	True	NA	NA	False	NA	NA	NA	170181745	170136595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170136666_170145422_170145522_170149085_170149245_170171372_170171451_170172556_170172713_170178772_170178939_170181701
transcript_10416.known	chr1	-	2459	11	FSM	ENSG00000143390.18	ENST00000368870.6	2459	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	89.508044331222	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTTCATGTAACTAGAAAG	-151347287	False	NA	NA	False	AATAAA	-11	NA	151347326	151341828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151343179_151343341_151343443_151343680_151343883_151344196_151344279_151344416_151344537_151344727_151344848_151345105_151345189_151345927_151345962_151346204_151346334_151346484_151346607_151347210
transcript_104160.known	chr3	+	4887	18	FSM	ENSG00000163558.13	ENST00000295797.5	4887	18	0	0	0	0	multi-exon	FALSE	canonical	3	793	junction_14	59.8813706148482	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGAGTGGATCATTTTTC	170209102	True	NA	54	True	AATAAA	-15	NA	170222423	170305977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170222771_170235229_170235352_170259968_170260059_170263378_170263430_170267914_170268001_170270420_170270562_170273285_170273341_170275228_170275288_170280226_170280404_170281165_170281264_170281881_170281969_170284460_170284597_170291853_170291942_170293382_170293509_170295910_170295991_170297303_170297394_170298994_170299111_170303039
transcript_104167.known	chr3	+	7155	7	FSM	ENSG00000136603.14	ENST00000259119.9	7155	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	80.2987477417232	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATTCAAGTTATTTCAG	170346520	True	NA	19	True	AATAAA	-21	NA	170357714	170396835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170357764_170359698_170361430_170381243_170381342_170384532_170384766_170390222_170390465_170391035_170391261_170392258
transcript_104171.known	chr3	+	594	2	FSM	ENSG00000136603.14	ENST00000465590.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGAGAGTAAGTTACG	170346490	True	NA	NA	False	GGGGCT	-11	NA	170357684	170360213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170357764_170359698
transcript_104173.known	chr3	+	599	2	FSM	ENSG00000136603.14	ENST00000490989.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAACCAAAACTAAGTCGC	170355851	True	NA	NA	False	NA	NA	NA	170358508	170360160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170358646_170359698
transcript_104175.known	chr3	+	2758	3	FSM	ENSG00000013297.12	ENST00000064724.8	2758	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAATTGGCAAACATTTC	170418322	True	NA	NA	False	AATAAA	-26	NA	170418867	170434691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170419293_170423162_170423328_170432523
transcript_104177.known	chr3	+	998	2	FSM	ENSG00000013297.12	ENST00000486429.1	998	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCAGGCAAGACTGAGC	170418329	True	NA	NA	False	NA	NA	NA	170418874	170423742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_170419293_170423162
transcript_104183.known	chr3	-	545	4	FSM	ENSG00000163584.18	ENST00000466674.5	545	4	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	456.754736033343	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGTCTCATTTTTTTGA	-170870015	False	NA	-13	True	AATAAA	-19	NA	170870033	170866263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170866525_170868012_170868135_170868297_170868391_170869964
transcript_104192.known	chr3	-	506	4	FSM	ENSG00000163584.18	ENST00000463836.1	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	438.221658778092	11900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAACTTTTGTCTCATTTTT	-170861611	True	NA	-17	True	AATAAA	-15	NA	170870195	170866267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170866525_170868012_170868135_170868297_170868388_170870158
transcript_104193.known	chr3	-	587	4	FSM	ENSG00000163584.18	ENST00000494771.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	473.360562597078	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTTTGTCTCATTTTTT	-170861624	True	NA	-16	True	AATAAA	-16	NA	170870208	170866266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170866525_170868012_170868202_170868297_170868388_170870158
transcript_104194.known	chr3	-	5534	5	FSM	ENSG00000163577.8	ENST00000295822.7	5534	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	11.5542200082913	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTCTTGTACATATACAT	-170907750	True	NA	NA	False	AATAAA	-19	NA	170908637	170888417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170893420_170894291_170894424_170906988_170907094_170907641_170907842_170908542
transcript_104195.known	chr3	-	570	5	FSM	ENSG00000163577.8	ENST00000474096.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	42.573465914816	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCATGAACACTGTTTATG	-170907757	True	NA	-40	True	AATAAA	-11	NA	170908644	170893348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170893420_170894291_170894384_170906988_170907094_170907641_170907842_170908542
transcript_104197.known	chr3	-	565	4	FSM	ENSG00000163577.8	ENST00000487522.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	44.8429357746445	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGCAATTGATAATTTTTA	-170907711	True	NA	93	True	NA	NA	NA	170908598	170893215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_170893420_170906988_170907094_170907641_170907842_170908542
transcript_104201.nnic	chr3	-	423	3	NNC	ENSG00000154310.17	novel	750	3	NA	NA	30285	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTCTCCTGTTTAAAA	-171429623	True	NA	-15	True	ATTAAA	-16	NA	171429778	171346933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_171347219_171369619_171369686_171429706
transcript_104204.known	chr3	-	750	3	FSM	ENSG00000154310.17	ENST00000465393.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	63.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTCTCTCCTGTTTAAAA	-171457964	True	NA	-15	True	ATTAAA	-16	NA	171460405	171346933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_171347219_171369619_171369686_171460006
transcript_104206.nnic	chr3	-	852	2	NNC	ENSG00000154310.17	novel	750	3	NA	NA	1746	-22004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGAAAGTGAACTGTT	-171458300	False	NA	NA	False	AAAACA	-3	NA	171458317	171368937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_171369686_171458213
transcript_104207.known	chr3	-	573	4	FSM	ENSG00000154310.17	ENST00000487846.1	573	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.3814092215947	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGTGAATAACTCTTGT	-171079552	False	34	NA	False	AAGAAA	-42	NA	171079583	171066469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_171066736_171068847_171068988_171071222_171071324_171079517
transcript_104210.known	chr3	+	1303	3	FSM	ENSG00000240497.3	ENST00000657847.1	1303	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTATTGTTTTTATT	171459231	False	NA	7	True	AATAAA	-10	NA	171459247	171469702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_171459392_171468083_171468256_171468715
transcript_104213.nnic	chr3	+	1086	3	Fusion	ENSG00000240497.3_ENSG00000279673.1	novel	229	2	NA	NA	-39	3	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTATTGTTTTTATTTCT	171460218	True	NA	10	True	AATAAA	-13	NA	171460572	171469705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_171461358_171468083_171468256_171469576
transcript_104214.known	chr3	-	1012	2	FSM	ENSG00000075651.17	ENST00000460926.1	1012	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTCTCTTGGCTTGAG	-171810318	True	NA	NA	False	AATAAA	-29	NA	171810441	171788566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_171789536_171810398
transcript_104218.known	chr3	+	946	4	FSM	ENSG00000075420.13	ENST00000421757.5	946	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	51.6483838619908	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACCTCTTCTTATTCAT	172034793	True	NA	NA	False	AATAAA	-27	NA	172039627	172187298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172039772_172112451_172112591_172133470_172133547_172186711
transcript_104220.known	chr3	+	408	4	FSM	ENSG00000075420.13	ENST00000423424.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	54.1356321350981	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGGCTTTTCAATGTCT	172039864	True	NA	NA	False	NA	NA	NA	172040554	172186834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172040625_172112451_172112591_172133470_172133547_172186711
transcript_104221.nic	chr3	+	1850	3	ISM	ENSG00000075420.13	ENST00000421757.5	946	4	-33	52294	17	-51830	5prime_fragment	FALSE	canonical	3	105	junction_1	16	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	172034760	True	NA	NA	False	ATTAAA	-45	NA	172039594	172135004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_172039772_172112451_172112591_172133470
transcript_104222.nic	chr3	+	1768	3	ISM	ENSG00000075420.13	ENST00000423424.5	408	4	-25	51830	-24	-51830	5prime_fragment	FALSE	canonical	3	31	junction_1	53	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACACTAGAAAAACTAGAT	172039839	True	NA	NA	False	ATTAAA	-45	NA	172040529	172135004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_172040625_172112451_172112591_172133470
transcript_104223.nnic	chr3	+	967	3	NNC	ENSG00000075420.13	novel	946	4	NA	NA	26477	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTACTTGACCTCTTCTTA	172174912	True	NA	NA	False	AATAAA	-22	NA	172175011	172187293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_172175287_172184273_172184384_172186711
transcript_104228.known	chr3	+	4136	25	FSM	ENSG00000114346.14	ENST00000392692.8	4136	25	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_4	49.0439145619062	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736404	True	NA	18	True	AATAAA	-20	NA	172750725	172821474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_104231.known	chr3	+	4087	24	FSM	ENSG00000114346.14	ENST00000232458.9	4087	24	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	82.8753590747994	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTCTCATGTATTAA	172736360	True	NA	18	True	AATAAA	-20	NA	172750681	172821474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_172750858_172754508_172754661_172755294_172755375_172756982_172757166_172758979_172759070_172760155_172760264_172761609_172761684_172762415_172762547_172762690_172762807_172762909_172762973_172764277_172764501_172769006_172769144_172773902_172774023_172782162_172782232_172783798_172783910_172784706_172784804_172786492_172786575_172802615_172802695_172802860_172802981_172805730_172805870_172807769_172807925_172815603_172815712_172816690_172816838_172820147
transcript_104235.nic	chr3	+	639	5	ISM	ENSG00000114346.14	ENST00000392692.8	4136	25	-34	64344	7	0	5prime_fragment	FALSE	canonical	3	327	junction_4	45.3010761461579	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAGTTGTATTAAATTGT	172736370	True	NA	NA	False	NA	NA	NA	172750691	172757130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_172750858_172754508_172754661_172755294_172755375_172755482_172755576_172756982
transcript_104237.nnic	chr3	-	1471	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227313	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	0.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAGCATGTGCTCATA	-173161046	True	NA	NA	False	ATTAAA	-15	NA	173161232	173116675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_104238.nnic	chr3	-	1213	3	NNC	ENSG00000144962.7	novel	2074	11	NA	NA	-19997	-227571	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	0.5	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTGTGTGCACTTGAT	-173161046	True	NA	0	True	AATAAA	-22	NA	173161232	173116933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_173117750_173159142_173159286_173160978
transcript_10424.known	chr1	+	618	2	FSM	ENSG00000237976.2	ENST00000455503.2	647	2	29	0	29	0	multi-exon	FALSE	canonical	3	78	junction_1	0	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGGAACATTGTACTGA	151346112	True	NA	NA	False	NA	NA	NA	151346966	151348027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151347189_151347631
transcript_104244.known	chr3	+	675	3	FSM	ENSG00000177694.16	ENST00000478624.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTTTTGTTCATGTTTT	174440815	True	NA	NA	False	NA	NA	NA	174440977	174459777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_174441033_174458513_174458597_174459240
transcript_104247.known	chr3	-	440	1	FSM	ENSG00000214192.3	ENST00000397758.2	440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACTAATCAAAAAAAAAAAAA	NA	False	NA	NA	False	AAGAAA	-43	NA	175718670	175718230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_175718200_175718700
transcript_104253.known	chr3	-	7948	16	FSM	ENSG00000177565.18	ENST00000430069.5	7948	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_15	58.0861429258304	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAATTACTAATGTTT	-177196454	False	2914	-10	True	ATTAAA	-24	NA	177196478	177019354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177196339
transcript_104254.known	chr3	-	8182	16	FSM	ENSG00000177565.18	ENST00000457928.7	8182	16	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_15	46.5403051128804	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTTCTTGGTTGTTG	-177197160	True	NA	1	True	ATTAAA	-35	NA	177197482	177019343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177025525_177026372_177026475_177032970_177033137_177034197_177034326_177038097_177038173_177038312_177038435_177046128_177046190_177047299_177047398_177047485_177047550_177049996_177050139_177050477_177050611_177051503_177051727_177053772_177053919_177064919_177065023_177098465_177098542_177197120
transcript_104262.known	chr3	-	550	4	FSM	ENSG00000177565.18	ENST00000431421.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	91.4123745573991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCTCAGACAAGAATTT	-177194311	True	NA	NA	False	AAAACA	-40	NA	177197225	177051503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_177051727_177053772_177053919_177098465_177098542_177197120
transcript_104275.nic	chr3	-	644	4	NIC	ENSG00000237978.6	novel	844	8	NA	NA	-51	25	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	39.8078719183363	136	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859352	True	NA	-5	True	NA	NA	NA	178860456	178748962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_178749237_178841544_178841617_178859488_178859624_178860293
transcript_10428.known	chr1	-	1724	12	FSM	ENSG00000143416.21	ENST00000443708.5	1724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.1189889501172	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGATGGCCTTGTCTTTG	-151371827	True	NA	-8	True	AATAAA	-16	NA	151372707	151364307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151368999_151369190_151369441_151369555_151369712_151369770_151372637
transcript_104285.nnic	chr3	-	642	3	NNC	ENSG00000237978.6	novel	964	8	NA	NA	-36	25	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	42.5	244	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	-178859337	True	NA	-5	True	NA	NA	NA	178860441	178748962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_178749237_178859488_178859624_178860208
transcript_104286.nnic	chr3	-	710	3	NIC	ENSG00000237978.6	novel	964	8	NA	NA	-189	25	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	0	721	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATCTTTGTTTTGTTA	NA	False	NA	-5	True	NA	NA	NA	178860594	178748962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_178749237_178859488_178859624_178860293
transcript_104293.known	chr3	-	8936	6	FSM	ENSG00000172667.11	ENST00000311417.7	8936	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.77752524926425	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGGTTATGAGTTGAA	-179069415	True	NA	0	True	AATAAA	-26	NA	179071809	179017222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179025229_179027422_179027524_179027645_179027813_179030879_179031000_179067482_179067810_179071594
transcript_104296.known	chr3	-	7246	4	FSM	ENSG00000171121.17	ENST00000485523.5	7246	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.09120616516523	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGTTTGTGCATTT	-179258752	False	NA	NA	False	AATAAA	-18	NA	179259208	179236690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179243285_179244494_179244694_179250742_179250935_179258947
transcript_104298.known	chr3	+	5962	6	FSM	ENSG00000121864.10	ENST00000496856.6	5962	6	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	78.080983600362	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGACTTAATCCTGGC	179321481	True	NA	8	True	ATTAAA	-17	NA	179323030	179338583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179323292_179327560_179327632_179328282_179328352_179329617_179329729_179332988_179333124_179333268
transcript_10430.known	chr1	-	1922	11	FSM	ENSG00000143416.21	ENST00000463664.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	68.5991253588557	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGAGGCACCAAGAAATA	-151371814	True	NA	-45	True	NA	NA	NA	151372694	151364344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369555_151369712_151369770_151372637
transcript_104300.known	chr3	+	5212	18	FSM	ENSG00000171109.19	ENST00000471841.6	5212	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	13.5557288799654	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAATGTAGCATTTATACTA	179346349	True	NA	11	True	AATAAA	-22	NA	179347708	179394936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179347811_179348844_179348964_179351899_179352036_179358839_179359003_179362357_179362483_179364296_179364406_179365117_179365226_179367438_179367593_179368035_179368104_179375219_179375342_179377041_179377169_179377343_179377449_179378340_179378444_179378584_179378815_179385568_179385722_179386432_179386630_179390003_179390139_179391980
transcript_104301.known	chr3	-	1173	10	FSM	ENSG00000114450.11	ENST00000674862.1	1173	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	24.0739601136904	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCATACATATTTGTT	-179447517	True	NA	NA	False	NA	NA	NA	179451470	179401212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179401320_179405189_179405407_179413411_179413614_179413714_179413782_179414884_179415048_179416492_179416557_179419398_179419506_179420888_179420928_179426143_179426226_179451345
transcript_104329.known	chr3	-	1126	7	FSM	ENSG00000136522.14	ENST00000259038.6	1126	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	400.669301156064	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTTAGTCCTTAAAGTA	-179598412	True	NA	-22	True	AATAAA	-31	NA	179604640	179588454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602738_179604526
transcript_10434.known	chr1	-	2128	10	FSM	ENSG00000143416.21	ENST00000470345.5	2128	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	71.9878247593317	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGATGGCCTTGTCTTT	-151371826	True	NA	-9	True	AATAAA	-15	NA	151372706	151364308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366274_151366454_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_104345.known	chr3	-	673	6	FSM	ENSG00000136522.14	ENST00000392659.2	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	439.865888652439	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGTGTACAGGAGTAA	-179598421	True	NA	-1	True	ATTAAA	-24	NA	179604649	179588830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179604526
transcript_104352.known	chr3	+	1854	14	FSM	ENSG00000136518.17	ENST00000429709.7	1854	14	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	70.2105034371597	3853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	179548122	True	NA	126	True	AATAAA	-23	NA	179562925	179588407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179563118_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_104353.known	chr3	-	1354	7	FSM	ENSG00000136522.14	ENST00000476781.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_1	111.897894926084	5201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTTGGAAAGCATTTTA	-179598410	True	NA	24	True	AATAAA	-40	NA	179604638	179588284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179588996_179592643_179592740_179593764_179593896_179598674_179598772_179601729_179601791_179602651_179602798_179604526
transcript_104354.known	chr3	+	1750	14	FSM	ENSG00000136518.17	ENST00000450518.6	1750	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	241.709248781973	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGACTGTTGTGCACTG	NA	False	NA	126	True	AATAAA	-23	NA	179562885	179588407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179562974_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_104355.known	chr3	+	597	3	FSM	ENSG00000136518.17	ENST00000491202.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	8	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGATGCATAAGAAATG	179548119	True	NA	NA	False	NA	NA	NA	179562922	179570391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179563118_179569823_179569901_179570066
transcript_104356.known	chr3	+	316	3	FSM	ENSG00000136518.17	ENST00000484312.1	316	3	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_1	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCTTCATTTGTCTGTG	179581153	False	NA	NA	False	AGTAAA	-18	NA	179581163	179586708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179581221_179583352_179583449_179586545
transcript_104357.known	chr3	+	1899	14	FSM	ENSG00000136518.17	ENST00000392662.5	1899	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.511409438596	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATATATTTTGGACTGT	179548116	True	NA	117	True	AATAAA	-14	NA	179562919	179588398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179563166_179569823_179569901_179570066_179570242_179573368_179573470_179574369_179574468_179576216_179576312_179576619_179576727_179576823_179576914_179580639_179580702_179580893_179581009_179581139_179581221_179583352_179583449_179586545_179586633_179587929
transcript_104358.nic	chr3	+	308	3	ISM	ENSG00000136521.13	ENST00000488002.5	842	4	100	1367	-1	643	5prime_fragment	FALSE	canonical	3	924	junction_1	17.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCACTTCCATCCCCTGC	179590193	True	NA	NA	False	NA	NA	NA	179604789	179616051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_179604940_179614970_179615060_179615982
transcript_104359.nnic	chr3	+	721	2	NIC	ENSG00000136521.13	novel	1054	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	26	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	179590203	True	NA	14	True	AATAAA	-32	NA	179604799	179624500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_179604940_179623919
transcript_104360.known	chr3	+	3163	26	FSM	ENSG00000288698.1	ENST00000680408.1	3163	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	241.664176906715	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTTAATTTGCCAAAAAA	179590210	True	NA	30	True	TATAAA	-25	NA	179604806	179784179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179618414_179618522_179639863_179640046_179640733_179640857_179681877_179682004_179690240_179690302_179701007_179701130_179706933_179707077_179708772_179708958_179719939_179720035_179721401_179721590_179730188_179730261_179730615_179730710_179740246_179740373_179742196_179742351_179745042_179745218_179752284_179752374_179754731_179754855_179757051_179757079_179761111_179761256_179764001_179764169_179765694_179765849_179781738_179781824_179784047
transcript_104377.known	chr3	+	824	5	FSM	ENSG00000136521.13	ENST00000468210.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	473.706132533663	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTAGATGTCTGTATT	179590212	True	NA	144	True	NA	NA	NA	179604808	179624376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_104379.known	chr3	+	689	5	FSM	ENSG00000136521.13	ENST00000473500.5	689	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	571.244474809166	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATAGTATTTTGTACAAA	179590310	True	NA	119	True	NA	NA	NA	179604906	179624351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179607757_179607813_179616982_179617045_179618414_179618522_179623919
transcript_10438.nnic	chr1	-	1991	9	NIC	ENSG00000143416.21	novel	1963	11	NA	NA	-36	0	intron_retention	FALSE	canonical	0	0	junction_7	98.1369419484834	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGGCCTTGTCTTTGGGGG	NA	False	NA	-4	True	AATAAA	-20	NA	151372743	151364303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_151364706_151364925_151365045_151365188_151365282_151365562_151365685_151365767_151365847_151366721_151366905_151368198_151368320_151369003_151369770_151372637
transcript_104381.known	chr3	+	4046	4	FSM	ENSG00000136521.13	ENST00000493866.5	4046	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	437.177563722365	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTCTCTCTGATTCCTTA	179590194	True	NA	10	True	AATAAA	-18	NA	179604790	179627647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179616982_179617045_179618414_179618522_179623919
transcript_104387.known	chr3	+	1054	6	FSM	ENSG00000136521.13	ENST00000359944.10	1054	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	426.414352478901	6376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGCTTTCATGGTTTTTT	179590214	True	NA	14	True	AATAAA	-32	NA	179604810	179624500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614951_179615060_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_104388.known	chr3	+	951	5	FSM	ENSG00000136521.13	ENST00000611971.4	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	379.954191317848	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGCTTTCATGGTTTTT	179590190	True	NA	13	True	AATAAA	-31	NA	179604786	179624499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614970_179615060_179615982_179616050_179616982_179617045_179623919
transcript_104389.known	chr3	+	671	7	FSM	ENSG00000136521.13	ENST00000482604.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	495.951162470213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATATATTCTGTATTT	179590229	True	NA	-8	True	AATAAA	-3	NA	179604825	179624091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179614970_179615060_179615555_179615616_179615982_179616050_179616982_179617045_179618414_179618522_179623919
transcript_104390.known	chr3	+	175	3	FSM	ENSG00000136521.13	ENST00000496904.5	175	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	475	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGCCGTCCTTCAGAT	179590293	True	NA	NA	False	NA	NA	NA	179604889	179618477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_179604940_179616982_179617045_179618414
transcript_104395.known	chr3	-	587	3	FSM	ENSG00000114757.19	ENST00000474909.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGTTTTTTCTGCAA	-180036585	True	NA	NA	False	AAAAAG	-37	NA	180037035	179900672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_179900736_179971593_179971661_180036578
transcript_104398.known	chr3	+	2274	13	FSM	ENSG00000163728.11	ENST00000382584.8	2274	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	18	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAGGTGTACATTATTT	180601048	True	NA	14	True	AATAAA	-23	NA	180602210	180617828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629_180610004_180617379
transcript_104401.known	chr3	+	3000	12	FSM	ENSG00000163728.11	ENST00000296015.9	3000	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	12.7064765161136	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTTCCACCCAGCATAA	180601000	True	NA	NA	False	ATTAAA	-20	NA	180602162	180611130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647_180607766_180608700_180608811_180609629
transcript_104409.known	chr3	+	4568	10	FSM	ENSG00000163728.11	ENST00000412756.6	4568	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	9.94428926011753	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATATGTTCGAATGTTT	180601030	True	NA	NA	False	ATTAAA	-19	NA	180602192	180610974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180602423_180602890_180603016_180603123_180603324_180604224_180604310_180604477_180604608_180604851_180605008_180605765_180605838_180606252_180606373_180606480_180606604_180607647
transcript_104415.known	chr3	+	3277	18	FSM	ENSG00000114416.18	ENST00000305586.11	3277	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	194.041571545608	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	180912331	False	NA	11	True	AATAAA	-16	NA	180912481	180977155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180914651_180914996_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180975312_180975405_180976121
transcript_104420.known	chr3	+	1989	15	FSM	ENSG00000114416.18	ENST00000468861.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	162.014549611182	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGGAAATGTTATTTTGTT	180885711	True	NA	16	True	ATTAAA	-16	NA	180912670	180976545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_104421.known	chr3	+	1768	14	FSM	ENSG00000114416.18	ENST00000491062.5	1768	14	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	160.642386471818	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAAGGGGAGGGATCCT	180885711	True	NA	-76	True	NA	NA	NA	180912670	180976418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_104429.known	chr3	+	2651	16	FSM	ENSG00000114416.18	ENST00000445140.6	2651	16	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_15	76.3426195224892	1789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAATTTTTTTAACTTT	180885712	True	NA	11	True	AATAAA	-16	NA	180912671	180977155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180962941_180963027_180963091_180968050_180968255_180970157_180970359_180976121
transcript_104430.known	chr3	+	2130	15	FSM	ENSG00000114416.18	ENST00000472339.5	2130	15	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_14	78.7714661381329	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTTGTTTTCAAAAT	180885718	True	NA	24	True	ATTAAA	-24	NA	180912677	180976553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180912737_180933333_180933387_180935137_180935232_180947864_180947937_180948346_180948496_180948720_180948815_180949226_180949344_180951297_180951469_180953761_180953841_180957818_180957929_180961467_180961555_180962882_180963091_180968050_180968255_180970157_180970359_180976121
transcript_104431.known	chr3	-	399	1	FSM	ENSG00000213157.3	ENST00000439549.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGACAGCTCATATGC	NA	False	NA	NA	False	AAGAAA	-2	NA	180888075	180887676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180887700_180888100
transcript_104439.known	chr3	+	2094	3	FSM	ENSG00000242808.11	ENST00000646296.2	2094	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACATTATAATTGTTTT	181711004	True	NA	NA	False	AAAAAG	-42	NA	181711101	181741290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181711366_181715184_181715293_181739568
transcript_104443.nic	chr3	+	795	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3855	1263	3855	2	3prime_fragment	FALSE	canonical	3	31	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTATGTTCATTCC	181714702	True	NA	NA	False	TTTAAA	-19	NA	181714956	181740027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_181715293_181739568
transcript_104445.nic	chr3	+	1609	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3855	449	3855	1	3prime_fragment	FALSE	canonical	3	31	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTAGTGTTCTCTTAT	181714702	True	NA	8	True	AATAAA	-19	NA	181714956	181740841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_181715293_181739568
transcript_104446.nic	chr3	+	3235	2	ISM	ENSG00000242808.11	ENST00000646296.2	2094	3	3855	-1177	3855	-3	3prime_fragment	FALSE	canonical	3	31	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCAGTGATTATTTCCTT	181714702	True	NA	NA	False	AATAAA	-18	NA	181714956	181742467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_181715293_181739568
transcript_104447.known	chr3	+	2920	2	FSM	ENSG00000242808.11	ENST00000647034.2	3006	2	33	53	33	-31	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGTTTAAGATATCAGAAA	181727000	True	NA	NA	False	AATAAA	-40	NA	181727024	181742417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181727096_181739568
transcript_104449.known	chr3	+	654	4	FSM	ENSG00000242808.11	ENST00000668295.2	671	4	13	4	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCACTATGACTGTTGC	180989765	True	NA	NA	False	AATAAA	-22	NA	180989778	181117489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_180989841_181056696_181056787_181088876_181088918_181117028
transcript_104454.known	chr3	-	610	6	FSM	ENSG00000205981.9	ENST00000479269.5	610	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_5	519.270103125531	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGCTACAATTTTAAAAAA	-180989489	False	NA	-54	True	AATAAA	-8	NA	180989518	180984564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180988177_180988230_180989331
transcript_104460.known	chr3	-	769	5	FSM	ENSG00000205981.9	ENST00000491873.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	608.623652185815	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGTATGATGGAAATTAG	-180967036	True	NA	NA	False	GATAAA	-21	NA	180989710	180984277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986942_180987023_180988022_180988097_180989599
transcript_104465.known	chr3	-	324	3	FSM	ENSG00000205981.9	ENST00000646965.1	324	3	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	740.5	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAAGCCTTGGTATAAT	-180966993	True	NA	-15	True	TTTAAA	-23	NA	180989667	180984525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180989599
transcript_104466.known	chr3	-	1239	5	FSM	ENSG00000205981.9	ENST00000469657.5	1239	5	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	587.577813995729	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTAATTTGGACTCTT	-180967029	True	NA	-66	True	NA	NA	NA	180989703	180983772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180988022_180988097_180988177_180988230_180989599
transcript_104467.known	chr3	-	520	6	FSM	ENSG00000205981.9	ENST00000643241.1	520	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	586.452180488742	5663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAATGCCTCAGAGCTA	-180967040	True	NA	-67	True	NA	NA	NA	180989714	180984577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_180984711_180985925_180985997_180986947_180987023_180988022_180988097_180988177_180988230_180989599
transcript_104468.known	chr3	+	2512	1	FSM	ENSG00000181449.4	ENST00000325404.3	2512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	731	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCTTGAGTCTTTCATT	181699574	True	NA	19	True	AATAAA	-24	NA	181711924	181714436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_181711900_181714400
transcript_10447.known	chr1	+	918	7	FSM	ENSG00000159377.11	ENST00000290541.7	918	7	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_6	70.1205311509325	5686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	151391287	True	NA	14	True	AATAAA	-14	NA	151399572	151401937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151399728_151399980_151400188_151400441_151400589_151400763_151400846_151401238_151401356_151401541_151401631_151401816
transcript_104474.known	chr3	+	7315	30	FSM	ENSG00000058063.16	ENST00000323116.10	7315	30	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_9	13.0672822134936	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAAGTGTTCCTTTATTT	182791296	True	NA	12	True	AATAAA	-16	NA	182793503	182921629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_182793787_182820259_182820377_182828119_182828210_182829671_182829753_182836034_182836143_182836341_182836471_182837070_182837175_182842074_182842123_182845457_182845523_182848475_182848558_182857877_182858029_182859161_182859360_182865455_182865699_182866267_182866444_182867375_182867445_182869077_182869152_182869227_182869332_182872355_182872538_182873811_182874016_182879495_182879650_182880878_182880982_182884752_182884899_182885950_182886011_182887585_182887714_182889409_182889549_182896699_182896766_182897302_182897407_182898606_182898773_182913860_182913995_182918022
transcript_104475.known	chr3	-	3147	7	FSM	ENSG00000043093.15	ENST00000632685.1	3147	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_6	27.1932385386923	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACATATGGCTGTGTGTGT	-182973098	True	NA	78	True	GATAAA	-40	NA	182980538	182942775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_182945174_182947237_182947335_182947549_182947633_182961225_182961357_182963880_182964050_182965536_182965754_182980486
transcript_10448.known	chr1	+	665	3	FSM	ENSG00000159377.11	ENST00000466425.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	1514	junction_2	71.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGAGTGGTTTTTGTCT	151400876	False	NA	14	True	AATAAA	-14	NA	151400900	151401937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151401356_151401541_151401631_151401816
transcript_104482.known	chr3	-	2454	19	FSM	ENSG00000078070.14	ENST00000265594.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_16	16.5961471060434	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTTCTGCCTCAAAT	-183096512	True	NA	-1	True	AATAAA	-28	NA	183099496	183015217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183037217_183037435_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_104487.known	chr3	-	2316	18	FSM	ENSG00000078070.14	ENST00000629669.2	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	35.330471473402	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTGTTTCTGCCTCAA	-183096593	True	NA	-3	True	AATAAA	-26	NA	183099577	183015219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183015567_183017265_183017338_183020129_183020238_183022416_183022555_183025754_183025805_183033990_183034078_183039025_183039136_183041566_183041751_183045412_183045541_183052158_183052241_183057310_183057423_183070998_183071121_183071209_183071358_183072365_183072488_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_10449.known	chr1	-	2741	7	FSM	ENSG00000143442.22	ENST00000485040.5	2741	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	20.1390996157557	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGGAAAGTAGGCAAAGGA	-151458965	False	214	NA	False	NA	NA	NA	151459179	151426188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151428042_151428122_151428414_151429602_151429712_151430665_151430842_151440927_151441087_151442080_151442206_151459151
transcript_104499.nnic	chr3	-	993	5	NNC	ENSG00000078070.14	novel	222	2	NA	NA	-8	-6378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1006669497003	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTGGGATATGT	-183096601	True	NA	-4	True	AATAAA	-18	NA	183099585	183078804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_183079284_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_1045.nic	chr1	-	1131	7	ISM	ENSG00000248333.9	ENST00000407249.7	2677	20	-265	6799	-265	-614	5prime_fragment	FALSE	canonical	3	85	junction_3	10.2794292967395	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	NA	False	NA	NA	False	NA	NA	NA	1659277	1642385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_104500.nnic	chr3	-	1353	5	NNC	ENSG00000078070.14	novel	222	2	NA	NA	-8	-6378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	58.1006669497003	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTGGGATATGT	-183096601	True	NA	-4	True	AATAAA	-18	NA	183099585	183078804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_183079644_183086692_183086789_183092408_183092546_183094558_183094606_183099351
transcript_104503.nic	chr3	-	790	2	ISM	ENSG00000078070.14	ENST00000486226.1	581	6	-90	21623	-8	-1677	5prime_fragment	FALSE	canonical	3	134	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGTAAAAATAAATAAATAAA	-183096601	True	NA	NA	False	NA	NA	NA	183099585	183094049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_183094606_183099351
transcript_10451.known	chr1	+	5101	21	FSM	ENSG00000143375.15	ENST00000271636.12	5101	21	0	0	0	0	multi-exon	FALSE	canonical	1	93	junction_8	62.0010282172804	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGTTTGTCTTCTCAT	151508316	True	NA	16	True	ATTAAA	-28	NA	151511386	151538692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151511516_151518505_151519393_151520165_151520267_151520413_151520484_151520595_151520692_151523433_151523562_151524225_151524359_151524673_151524887_151525641_151525791_151526974_151527108_151529349_151529560_151529908_151530116_151530488_151530747_151532401_151532573_151533974_151534137_151535041_151535132_151535599_151535684_151535779_151535899_151536236_151536346_151536729_151536894_151537204
transcript_104513.nnic	chr3	+	1391	4	NNC	ENSG00000240024.6	novel	1491	4	NA	NA	-62	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	35.1789078220964	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	NA	False	NA	23	True	AATAAA	-27	NA	183447545	183456013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_183447766_183452077_183452352_183454011_183454094_183455198
transcript_104515.known	chr3	+	1490	4	FSM	ENSG00000240024.6	ENST00000471496.6	1491	4	0	1	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30.3461511379761	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446528	True	NA	23	True	AATAAA	-27	NA	183447607	183456013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183447766_183452077_183452513_183454011_183454094_183455198
transcript_10452.known	chr1	+	3033	12	FSM	ENSG00000143367.17	ENST00000368848.6	3033	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	8.19594739606156	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGTCTGGTTTCCTT	151539113	True	NA	14	True	AATAAA	-23	NA	151540307	151583583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151540427_151562584_151562687_151563903_151563991_151564524_151564615_151566162_151566229_151569656_151569771_151574269_151574399_151574910_151575006_151578720_151578827_151579648_151579733_151580941_151581043_151581643
transcript_104524.nnic	chr3	+	1558	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	36.2859017617954	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	NA	False	NA	23	True	AATAAA	-27	NA	183447568	183456013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_183447795_183452077_183452513_183454011_183454094_183455198
transcript_104531.nnic	chr3	+	1523	4	NNC	ENSG00000240024.6	novel	1667	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	32.4995726467629	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	183446516	True	NA	23	True	AATAAA	-27	NA	183447595	183456013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_183447948_183452077_183452352_183454011_183454094_183455198
transcript_104534.known	chr3	+	1241	4	FSM	ENSG00000240024.6	ENST00000686765.1	1667	4	34	392	2	84	multi-exon	FALSE	canonical	3	71	junction_1	9.67241208569794	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAAATT	183446571	True	NA	NA	False	NA	NA	NA	183447650	183455625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183447948_183452077_183452513_183454011_183454094_183455198
transcript_104538.nnic	chr3	+	1094	3	NIC	ENSG00000240024.6	novel	1491	4	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	46	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTGGTCCTTATTCCT	NA	False	NA	23	True	AATAAA	-27	NA	183447568	183456013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_183447766_183454011_183454094_183455198
transcript_104542.known	chr3	+	7380	9	FSM	ENSG00000114796.16	ENST00000454652.6	7380	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	31.8423852749759	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTGACTATATGGTTGT	183632150	True	NA	17	True	AATAAA	-18	NA	183635622	183684477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183635794_183636220_183636312_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_104545.known	chr3	+	7331	8	FSM	ENSG00000114796.16	ENST00000242810.11	7331	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	21.8426656069338	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTTCTGTTTTATTT	183632150	True	NA	9	True	ATTAAA	-17	NA	183635622	183684519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183635794_183643479_183643543_183650295_183651277_183663457_183663643_183664920_183665040_183671033_183671223_183672295_183672485_183679085
transcript_104552.known	chr3	+	389	2	FSM	ENSG00000114796.16	ENST00000481126.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCGTCCCCGGGGAGCC	183632162	True	NA	NA	False	NA	NA	NA	183635634	183636450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183635794_183636220
transcript_104553.nic	chr3	+	264	2	ISM	ENSG00000114796.16	ENST00000468101.5	574	4	-4	14235	0	-95	5prime_fragment	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGCGAAATGCACTCGGCA	183632146	True	NA	NA	False	ATTAAA	-4	NA	183635618	183636355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_183635748_183636220
transcript_104554.known	chr3	+	1024	5	FSM	ENSG00000163872.16	ENST00000432781.1	1024	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	78.040053818536	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATACCTTGTCTGTTTTC	183775958	True	NA	NA	False	AATAAA	-18	NA	183775990	183793486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_183776124_183777541_183777701_183786124_183786302_183790796_183790981_183793115
transcript_10456.known	chr1	+	495	1	FSM	ENSG00000223861.1	ENST00000452587.1	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGGAGAGGATTATTTTG	NA	False	NA	NA	False	NA	NA	NA	151557445	151557940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151557400_151557900
transcript_104564.known	chr3	-	1240	9	FSM	ENSG00000175193.14	ENST00000311101.9	1240	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	301.323512814715	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	-183873987	True	NA	-5	True	AATAAA	-21	NA	183884888	183829389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_10457.known	chr1	+	7250	12	FSM	ENSG00000143376.14	ENST00000368843.8	7250	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_11	15.9451539310318	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGACTACAAATCCTTT	151606591	True	NA	39	True	AATAAA	-31	NA	151612028	151699091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151693592
transcript_104579.known	chr3	-	1098	8	FSM	ENSG00000175193.14	ENST00000435888.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	451.041289571098	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTAAGCAGATGTGTGTG	-183873954	True	NA	-12	True	AATAAA	-14	NA	183884855	183829396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183844230_183844327_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_10458.known	chr1	+	6441	12	FSM	ENSG00000143376.14	ENST00000458013.7	6441	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.5140598507643	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTGGTTTCCTAGACT	151606612	True	NA	28	True	AATAAA	-20	NA	151612049	151699080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151612513_151638887_151639120_151658234_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151683355_151683446_151692434_151692585_151692910_151693040_151693423_151693484_151694369
transcript_104580.known	chr3	-	1534	11	FSM	ENSG00000175193.14	ENST00000638817.1	1534	11	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	425.031104744112	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTTCTCTCTTTAA	-183874006	True	NA	0	True	AATAAA	-26	NA	183884907	183829384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862752_183862802_183866624_183866766_183867864_183868061_183884721
transcript_104581.known	chr3	-	1545	11	FSM	ENSG00000175193.14	ENST00000639900.1	1545	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	433.807561022166	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTTTGTAAGCAGATGT	-183873978	True	NA	-17	True	AATAAA	-9	NA	183884879	183829401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183833723_183833826_183840569_183840641_183842297_183842448_183844230_183844327_183856431_183856552_183862696_183862802_183866624_183866766_183867864_183868061_183884721
transcript_104582.known	chr3	-	546	4	FSM	ENSG00000175193.14	ENST00000418450.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	396.099594658829	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGATGTGTGTGTTCTCTC	NA	False	NA	-5	True	AATAAA	-21	NA	183842354	183829389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183829710_183833491_183833590_183840569_183840641_183842297
transcript_104585.known	chr3	-	1923	7	FSM	ENSG00000114770.17	ENST00000382494.6	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	77.9887812444841	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183984895_183985303_183985379_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_104586.known	chr3	-	2000	7	FSM	ENSG00000114770.17	ENST00000443376.5	2000	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	85.6687742931396	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183984895_183985303_183985456_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_104587.known	chr3	-	1848	6	FSM	ENSG00000114770.17	ENST00000392579.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	78.4382559724526	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTGGTATTTAATACTG	-184014606	True	NA	-22	True	AATAAA	-17	NA	184017889	183983752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183984895_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_104588.nnic	chr3	-	1067	4	NNC	ENSG00000114770.17	novel	883	3	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	85.5608944943113	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	-184014693	True	NA	NA	False	ATTAAA	-18	NA	184017976	184000662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_184001252_184003341_184003489_184014263_184014448_184017829
transcript_104589.known	chr3	-	883	3	FSM	ENSG00000114770.17	ENST00000446941.2	883	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	82.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGTGTATGTTTGTCTAT	-184014656	True	NA	NA	False	ATTAAA	-18	NA	184017939	184000662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184001252_184014263_184014448_184017829
transcript_104590.known	chr3	-	5790	30	FSM	ENSG00000114770.17	ENST00000334444.11	5790	30	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_20	30.3640613025853	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTCGTGTATCAAACAAT	-184014601	True	NA	-3	True	AATAAA	-22	NA	184017884	183919933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_183921402_183925554_183925720_183927329_183927444_183928746_183928826_183937900_183938061_183942726_183942917_183945849_183945940_183947323_183947511_183949752_183949882_183949971_183950126_183951440_183951571_183951856_183952004_183953085_183953271_183959732_183959836_183961510_183961655_183963384_183963589_183965184_183965258_183965376_183965502_183967694_183967767_183971562_183971920_183977516_183977625_183978502_183978652_183981726_183981875_183982450_183982625_183982773_183983008_183987769_183987918_183988571_183988728_183989225_183989384_184014263_184014448_184017829
transcript_104592.known	chr3	-	620	1	FSM	ENSG00000273181.1	ENST00000609288.1	620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTATAAATTTGCGTTT	-184133549	False	NA	NA	False	AATAAA	-17	NA	184133561	184132941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184132900_184133600
transcript_104595.nnic	chr3	-	905	3	NNC	ENSG00000272721.5	novel	362	3	NA	NA	-60	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCACGTTGTAGAAAAGG	-184135286	False	NA	-14	True	ATTAAA	-3	NA	184135298	184134018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_184134279_184134535_184134594_184134711
transcript_104596.known	chr3	-	362	3	FSM	ENSG00000272721.5	ENST00000608135.1	362	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCACGTTGTAGAAAAGG	-184135133	True	NA	-14	True	ATTAAA	-3	NA	184135238	184134018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184134279_184134535_184134594_184135194
transcript_104597.known	chr3	+	930	2	FSM	ENSG00000145191.15	ENST00000471832.2	930	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGGTGCCAGTGGACTT	184131107	True	NA	15	True	AATAAA	-29	NA	184135354	184136979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184135917_184136611
transcript_104599.known	chr3	+	585	2	FSM	ENSG00000145191.15	ENST00000432569.2	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTGCCAGTGGACTTT	184131117	True	NA	16	True	AATAAA	-30	NA	184135364	184136980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184135581_184136611
transcript_104600.known	chr3	+	2613	17	FSM	ENSG00000145191.15	ENST00000648599.1	2613	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	99.1362698511498	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAAGAGAGAGTGGTGT	184131131	True	NA	-6	True	NA	NA	NA	184135378	184145290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184135581_184136611_184136737_184137619_184137806_184137897_184138076_184138165_184138247_184138846_184138940_184140079_184140158_184140417_184140731_184141924_184142071_184142236_184142379_184142501_184142604_184142778_184142887_184143051_184143143_184143441_184143566_184144098_184144225_184144596_184144708_184144883
transcript_104601.nnic	chr3	+	1334	2	Genic_Genomic	ENSG00000228205.1	novel	732	1	NA	NA	-123642	85	multi-exon	FALSE	canonical	0	0	junction_1	0	1111	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAAATTAGGGCTG	184026049	False	NA	NA	False	AATAAA	-23	NA	184026061	184150520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_184026500_184149624
transcript_104602.nnic	chr3	+	1286	2	Genic_Genomic	ENSG00000228205.1	novel	732	1	NA	NA	-123642	85	multi-exon	FALSE	canonical	0	0	junction_1	0	1113	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAAATTAGGGCTG	184026049	False	NA	NA	False	AATAAA	-23	NA	184026061	184150520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_184026500_184149672
transcript_104603.nnic	chr3	+	1333	2	Genic_Genomic	ENSG00000228205.1	novel	732	1	NA	NA	-123642	85	multi-exon	FALSE	canonical	0	0	junction_1	0	1145	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACAAAATTAGGGCTG	184026049	False	NA	NA	False	AATAAA	-23	NA	184026061	184150520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_+_184026547_184149672
transcript_104604.nnic	chr3	-	1303	2	Genic_Genomic	ENSG00000223529.1	novel	1388	1	NA	NA	-122765	306	multi-exon	FALSE	canonical	0	0	junction_1	0	1122	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTATTTTATTTTATTT	-184150503	False	NA	NA	False	ATTAAA	-25	NA	184150521	184026062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr3_-_184026509_184149664
transcript_104614.known	chr3	+	1931	12	FSM	ENSG00000161203.14	ENST00000292807.9	1931	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1261.99908318129	1895	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTGGCTTAGTGTTGAT	184132615	True	NA	22	True	AATAAA	-15	NA	184174854	184184091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184174960_184176950_184177068_184178856_184179123_184180168_184180252_184180644_184180651_184180848_184180985_184181084_184181227_184181695_184181816_184181911_184182048_184182150_184182249_184182756_184182869_184183481
transcript_104622.known	chr3	-	1552	9	FSM	ENSG00000214160.10	ENST00000397676.8	1552	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	252.195856429086	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243376	True	NA	27	True	NA	NA	NA	184248962	184242300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248744
transcript_104623.nic	chr3	-	1403	9	NIC	ENSG00000214160.10	novel	1533	9	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	286.116672006369	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184243388	True	NA	-3	True	AATAAA	-14	NA	184248974	184242424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248781
transcript_104624.known	chr3	-	1697	9	FSM	ENSG00000214160.10	ENST00000455059.5	1697	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	329.081083283436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTGGTTGGACTCTGCCC	-184249174	True	NA	-47	True	NA	NA	NA	184249520	184242468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184248989
transcript_104625.known	chr3	-	1533	9	FSM	ENSG00000214160.10	ENST00000445626.6	1533	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	324.015600511765	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCTGTGCAACCTACATG	-184249202	True	NA	-3	True	AATAAA	-14	NA	184249548	184242424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184245712_184245813_184249225
transcript_10463.known	chr1	+	695	6	FSM	ENSG00000143376.14	ENST00000482791.2	695	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	21.941741043044	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTACATTTTATTTT	151658340	True	NA	NA	False	AATAAA	-19	NA	151658368	151669363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151658428_151660797_151660863_151662165_151662271_151665932_151666012_151668471_151668636_151669140
transcript_104635.known	chr3	-	1452	8	FSM	ENSG00000214160.10	ENST00000411922.5	1452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	334.679255529279	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGACTGTGGCTCTCTAC	-184243376	True	NA	27	True	NA	NA	NA	184248962	184242300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184242677_184242812_184242958_184243553_184243631_184243790_184243997_184244600_184244722_184245197_184245359_184245467_184245616_184248744
transcript_10465.known	chr1	+	669	5	FSM	ENSG00000178796.13	ENST00000479191.2	669	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCAGCTGTGGTTTTGTTT	NA	False	NA	NA	False	NA	NA	NA	151721521	151729805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151721621_151722085_151722163_151727574_151727622_151728765_151728894_151729487
transcript_10467.known	chr1	-	2318	14	FSM	ENSG00000182134.17	ENST00000368827.10	2318	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	83.3070175411269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGTCTTTCTGAACTAG	-151786814	True	NA	NA	False	GATAAA	-15	NA	151790522	151771563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151771987_151774412_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_104670.known	chr3	-	725	4	FSM	ENSG00000214160.10	ENST00000482048.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_3	98.2728627625936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATCTATAGAAAGTTTCTG	-184243343	True	NA	NA	False	NA	NA	NA	184248929	184245066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184245359_184245467_184245616_184245712_184245813_184248744
transcript_104676.known	chr3	+	975	3	FSM	ENSG00000284753.2	ENST00000324557.9	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	4	2653	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGGTTTCTTGCTTCTT	184248355	True	NA	18	True	AATACA	-24	NA	184249671	184258759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184249891_184257472_184257757_184258287
transcript_104677.known	chr3	-	1452	2	FSM	ENSG00000163888.4	ENST00000296238.4	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGGCCGCTGCTTAG	-184261032	True	NA	-4	True	AATAAA	-18	NA	184261553	184259212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184260228_184261116
transcript_104678.known	chr3	+	2913	21	FSM	ENSG00000175166.17	ENST00000310118.9	2913	21	0	0	0	0	multi-exon	FALSE	canonical	3	2582	junction_8	233.22787140477	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTCTCTGTGTCTGTTTT	184275501	True	NA	24	True	AATAAA	-16	NA	184299240	184309050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184299402_184299850_184299908_184300279_184300445_184301536_184301659_184301846_184302072_184302369_184302529_184302678_184302824_184303001_184303063_184303319_184303467_184303642_184303750_184303946_184304075_184304303_184304392_184305767_184305931_184306053_184306156_184306349_184306496_184306750_184306835_184307356_184307526_184307613_184307709_184307889_184308017_184308448_184308568_184308707
transcript_104693.known	chr3	+	581	3	FSM	ENSG00000175166.17	ENST00000492191.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	3339	junction_2	58	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTTTCATTAGCATG	184275511	True	NA	NA	False	NA	NA	NA	184299250	184300652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184299402_184299850_184299908_184300279
transcript_104702.known	chr3	+	5405	33	FSM	ENSG00000114867.22	ENST00000346169.7	5405	33	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_14	343.108714322079	928	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCACTGCCTTTCTGCTTT	184279568	True	NA	19	True	ATTAAA	-16	NA	184314605	184335353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184314675_184315488_184315546_184315762_184315857_184316131_184316219_184317320_184317498_184317716_184317817_184319688_184319802_184320629_184320723_184320926_184320994_184321281_184322104_184322361_184322451_184322543_184322731_184322820_184322955_184323082_184323242_184323407_184323594_184323779_184323978_184324200_184324348_184324877_184325115_184325268_184325374_184325479_184325640_184325850_184325952_184326526_184326630_184326880_184326984_184327215_184327449_184327585_184327705_184327829_184328003_184328630_184328757_184328908_184328991_184331265_184331365_184331471_184331607_184331727_184331810_184331945_184332087_184334726
transcript_104703.known	chr3	+	1335	7	FSM	ENSG00000175182.15	ENST00000450976.5	1335	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	32.4486774255387	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTGTGGGCTCAAGGCT	184334411	True	NA	NA	False	NA	NA	NA	184335925	184345033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184336124_184337310_184337372_184338386_184338530_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_104709.known	chr3	+	2421	6	FSM	ENSG00000175182.15	ENST00000340957.9	2421	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	13.0751673029449	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACATCTGGTCATTGG	184334422	True	NA	22	True	ATTAAA	-27	NA	184335936	184346273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743_184342861_184344494
transcript_104713.nic	chr3	+	934	5	ISM	ENSG00000175182.15	ENST00000340957.9	2421	6	-13	3134	-2	0	5prime_fragment	FALSE	canonical	3	59	junction_2	12.4172259381876	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCGAAAGACCTCAAG	184334409	True	NA	NA	False	NA	NA	NA	184335923	184343139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_184336124_184337310_184337372_184341723_184341818_184342065_184342249_184342743
transcript_104715.known	chr3	+	573	4	FSM	ENSG00000175182.15	ENST00000433578.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	27.9324582201822	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGACATCCTGGGCTA	184334430	True	NA	NA	False	NA	NA	NA	184335944	184342860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184336124_184341723_184341818_184342065_184342249_184342743
transcript_104716.known	chr3	+	523	2	FSM	ENSG00000175182.15	ENST00000487702.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGCCGAAAGACCTCAAG	184342111	False	NA	NA	False	NA	NA	NA	184342121	184343139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184342249_184342743
transcript_104727.known	chr3	+	823	6	FSM	ENSG00000163882.10	ENST00000455712.5	823	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	381.010026114799	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAACCTCGCCTGAAG	184362575	False	NA	NA	False	NA	NA	NA	184362614	184368287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184362725_184363225_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_104730.known	chr3	+	994	5	FSM	ENSG00000163882.10	ENST00000438240.5	994	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	412.692606548748	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAAGTCCATTT	184361180	True	NA	-28	True	ATTAAA	-28	NA	184361788	184368550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184362147_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_104739.known	chr3	+	791	5	FSM	ENSG00000163882.10	ENST00000452961.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	402.926792358116	2786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGACTGCCCCTCCCCTTT	184354211	True	NA	13	True	ATTAAA	-11	NA	184363402	184368533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184366716_184366801_184368176
transcript_10474.known	chr1	-	2792	13	FSM	ENSG00000182134.17	ENST00000368824.8	2792	13	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_12	39.622086293155	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTAAAACCAAATTCTG	-151786792	True	NA	-13	True	AATAAA	-14	NA	151790500	151773493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790379
transcript_104740.known	chr3	+	807	4	FSM	ENSG00000163882.10	ENST00000443489.5	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	441.72867489243	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGTGGTGTATTGT	184354169	True	NA	13	True	AAAAAG	-29	NA	184363360	184368591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184363575_184364965_184365050_184365132_184365227_184368176
transcript_104741.known	chr3	+	878	5	FSM	ENSG00000163882.10	ENST00000429568.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	383.402774507436	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGGTGTATTGTTTCTG	184354242	True	NA	18	True	AAAAAG	-34	NA	184363433	184368596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184363566_184364965_184365050_184365132_184365227_184366716_184366801_184368112
transcript_104742.known	chr3	-	1918	6	FSM	ENSG00000090534.20	ENST00000647395.1	1918	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.16619037896906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAAGATGTTCTTCGAGG	-184378133	True	NA	NA	False	AATAAA	-32	NA	184378207	184371934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184373179_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
transcript_104744.known	chr3	-	1505	6	FSM	ENSG00000090534.20	ENST00000445696.6	1505	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.0591260281974	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATTTGCAACTCACTGA	-184378066	False	NA	NA	False	NA	NA	NA	184378140	184372268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184373167_184373414_184373583_184375514_184375602_184375887_184376016_184376246_184376405_184378074
transcript_104746.known	chr3	-	1701	1	FSM	ENSG00000177383.5	ENST00000317897.5	1701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1997	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTGTGATGCAC	-184702950	True	NA	-5	True	AATAAA	-19	NA	184712064	184710363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_184710400_184712100
transcript_10475.known	chr1	-	2768	13	FSM	ENSG00000182134.17	ENST00000458431.6	2768	13	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	62.4946108787701	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTTCTAAAACCAAAT	-151786797	True	NA	-17	True	AATAAA	-10	NA	151790505	151773497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151774505_151774709_151774807_151775064_151775167_151775391_151775544_151775819_151775885_151776095_151776269_151776438_151776600_151778684_151779007_151779102_151779243_151779950_151780141_151781480_151781588_151782898_151783050_151790404
transcript_104756.nnic	chr3	+	542	4	Antisense	novelGene_ENSG00000229433.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1.69967317119759	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCCTTAGAGTATTTTT	184752397	True	NA	NA	False	NA	NA	NA	184752544	184776389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_184752734_184759619_184759687_184775975_184776039_184776166
transcript_104767.nic	chr3	+	1495	7	ISM	ENSG00000156931.16	ENST00000625842.3	5014	48	-16	212056	7	11	5prime_fragment	FALSE	canonical	3	193	junction_1	13.7234592334926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAATAAAATTAACT	184810631	True	NA	NA	False	NA	NA	NA	184812149	184840548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697
transcript_104768.known	chr3	+	5047	47	FSM	ENSG00000156931.16	ENST00000287546.8	5047	47	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	37.6788802264992	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGGCTGGCTCTCAGT	184810624	True	NA	18	True	AATAAA	-29	NA	184812142	185052614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839759_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_104771.known	chr3	+	477	2	FSM	ENSG00000156931.16	ENST00000485024.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAGATATTTGTAGACTT	184810677	True	NA	4	True	AATAAA	-18	NA	184812195	184816230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184812226_184815783
transcript_104772.known	chr3	+	5011	47	FSM	ENSG00000156931.16	ENST00000436792.6	5011	47	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_16	19.5236272932135	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCTGGCTGGCTCTCA	184810652	True	NA	16	True	AATAAA	-27	NA	184812170	185052612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184812226_184824544_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713_184838747_184839697_184839753_184849070_184849196_184849935_184850023_184852499_184852568_184853856_184854011_184854113_184854174_184855710_184855819_184859984_184860066_184862896_184863068_184866875_184866951_184868023_184868060_184868945_184869037_184869481_184869529_184870715_184870806_184886109_184886157_184894702_184894926_184898564_184898655_184900920_184900973_184913518_184913562_184914980_184915054_184915354_184915475_184920126_184920199_184924861_184924982_184926593_184926651_184928450_184928534_184929579_184929665_184930469_184930569_184936245_184936336_184940196_184940244_184957373_184957522_184964467_184964558_184966670_184966714_184971648_184971753_184982565_184982648_184983011_184983095_184993982_184994064_184996331_184996502_184999695_184999862_185024335_185024390_185048478_185048560_185051875
transcript_104773.known	chr3	+	2359	5	FSM	ENSG00000156931.16	ENST00000424463.4	2359	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	11.0989864402116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAATAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	184824544	184840537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_184824786_184826162_184826232_184832688_184832820_184834648_184834743_184838713
transcript_104774.known	chr3	-	3801	7	FSM	ENSG00000113790.11	ENST00000231887.8	3801	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	3.43592135468138	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTCCAAAGTGACTT	-185253751	True	NA	2	True	AATAAA	-22	NA	185254049	185190623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185193488_185204415_185204758_185218135_185218241_185229431_185229544_185235289_185235463_185248413_185248518_185253948
transcript_104780.known	chr3	-	656	2	FSM	ENSG00000113790.11	ENST00000440662.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAGAGTCTTATAATAGAA	-185253733	True	NA	NA	False	AATAAA	-18	NA	185254031	185247944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185248518_185253948
transcript_104782.known	chr3	+	1681	3	FSM	ENSG00000073803.14	ENST00000448876.5	1681	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	12.5	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCACTTGCTGTTCTTTC	185281731	True	NA	11	True	AATAAA	-24	NA	185282940	185293079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185283028_185285516_185285644_185291612
transcript_104786.known	chr3	+	526	3	FSM	ENSG00000073803.14	ENST00000454237.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.5	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAATGTGTTCTGTGGCC	185281816	True	NA	108	True	NA	NA	NA	185283025	185291917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185283120_185285516_185285644_185291612
transcript_104794.known	chr3	-	2805	5	FSM	ENSG00000163900.11	ENST00000421852.6	2805	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	11.6699400169838	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGCTTGTTTGAAC	-185498087	True	NA	-7	True	AATAAA	-16	NA	185499035	185489600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185491758_185494622_185494762_185495153_185495316_185496827_185496982_185498842
transcript_104796.nnic	chr3	-	1267	4	NIC	ENSG00000163900.11	novel	2805	5	NA	NA	-3	-5	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	35.5621521658443	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAGAAAAAAAGAAA	-185498112	True	NA	NA	False	NA	NA	NA	185499060	185491001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_185491758_185494622_185494762_185496827_185496982_185498842
transcript_104797.known	chr3	-	1060	3	FSM	ENSG00000163900.11	ENST00000296254.3	1060	3	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	41.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAAAAAAAGAAAATGCT	-185498039	True	NA	NA	False	NA	NA	NA	185498987	185490996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185491758_185496827_185496982_185498842
transcript_104798.nic	chr3	+	3302	17	NIC	ENSG00000163904.13	novel	878	7	NA	NA	-54	696	combination_of_known_junctions	FALSE	canonical	3	129	junction_1	29.3954051468933	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATGCTGAAATGATTTC	185579794	True	NA	25	True	AATAAA	-26	NA	185582441	185631101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_185582818_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_104799.known	chr3	+	5596	17	FSM	ENSG00000163904.13	ENST00000296257.10	5596	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	39.9194501465138	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTCACTTGTTTTTT	185585418	True	NA	18	True	AATAAA	-18	NA	185586294	185633551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_185586515_185590113_185590170_185598411_185598546_185598957_185599025_185600764_185600856_185606329_185606499_185609246_185609351_185611650_185611746_185612606_185612659_185613344_185613409_185614563_185614741_185617479_185617612_185619298_185619503_185621825_185621906_185623997_185624083_185626297_185626394_185629781
transcript_1048.nic	chr1	-	720	6	ISM	ENSG00000248333.9	ENST00000341028.8	881	9	-216	7836	-176	-7836	5prime_fragment	FALSE	canonical	3	27	junction_4	35.4479900699602	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	-1659170	False	NA	17	True	AAAAAG	-4	NA	1659188	1649607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657255_1657303_1657374_1657499_1658913
transcript_104810.known	chr3	-	4283	16	FSM	ENSG00000073792.16	ENST00000382199.7	4283	16	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_6	101.223097934985	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTCTCACTGCATGTGA	-185810382	True	NA	-1	True	AATAAA	-18	NA	185825042	185643129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185672540_185672670_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_104812.known	chr3	-	3291	15	FSM	ENSG00000073792.16	ENST00000346192.7	3291	15	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	142.746385636362	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATGACAAAGAAAAACAGAG	-185810364	True	NA	20	True	TTTAAA	-10	NA	185825024	185643974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185645624_185647024_185647139_185649402_185649535_185652093_185652169_185657285_185657403_185658340_185658410_185675295_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_104820.nic	chr3	-	1537	10	NIC	ENSG00000073792.16	novel	3291	15	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	290.291041695897	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGCAAGAATA	-185825082	False	NA	NA	False	AATAAA	-15	NA	185825094	185675015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185693176_185693229_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_104824.nic	chr3	-	1485	9	ISM	ENSG00000073792.16	ENST00000346192.7	3291	15	-70	31041	-52	0	5prime_fragment	FALSE	canonical	3	725	junction_2	26.0645233027577	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAAAAGCAAGAATA	-185825082	False	NA	NA	False	AATAAA	-15	NA	185825094	185675015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_185675432_185675790_185675914_185687056_185687192_185689354_185689628_185692698_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_104831.nic	chr3	-	537	5	ISM	ENSG00000073792.16	ENST00000346192.7	3291	15	-70	48725	-52	-3145	5prime_fragment	FALSE	canonical	3	750	junction_2	18.5607111932706	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGCAGATTTGGGCTTA	-185825082	False	NA	NA	False	NA	NA	NA	185825094	185692699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_185692763_185696611_185696664_185698298_185698348_185823152_185823214_185824782
transcript_104835.nic	chr3	-	1888	2	ISM	ENSG00000073792.16	ENST00000466476.1	469	4	-202	125223	-52	-7583	5prime_fragment	FALSE	canonical	3	791	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAGAATTTTATCTTAG	-185825082	False	NA	NA	False	AGTAAA	-9	NA	185825094	185821637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_185823214_185824782
transcript_104843.known	chr3	-	976	8	FSM	ENSG00000136527.19	ENST00000382191.4	976	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	409.914177179884	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATGAAGACTTTCTGAAA	-185938089	False	NA	NA	False	ATTAAA	-36	NA	185938103	185917714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185937824
transcript_104848.known	chr3	-	4178	9	FSM	ENSG00000136527.19	ENST00000453386.7	4178	9	0	0	0	0	multi-exon	TRUE	canonical	3	1023	junction_8	98.7540347277011	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGATTGGTTCTATTCC	-185903278	True	NA	-1	True	AATATA	-29	NA	185938014	185914557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185937824
transcript_104849.known	chr3	-	943	5	FSM	ENSG00000136527.19	ENST00000259043.11	943	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	527.846746224697	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTAAAATACAGCCAGTG	-185923677	True	NA	-41	True	ACTAAA	-2	NA	185923893	185917154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185921103_185921188_185922010_185922127_185923795
transcript_104850.known	chr3	-	1697	10	FSM	ENSG00000136527.19	ENST00000456380.5	1697	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	482.057396306014	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTCTTTCTAACATAT	-185903293	True	NA	-37	True	AATAAA	-13	NA	185938029	185917329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185917726_185918364_185918439_185919436_185919497_185921103_185921188_185922010_185922127_185923795_185923985_185925463_185925627_185926600_185926735_185931576_185931853_185937824
transcript_104851.known	chr3	-	288	2	FSM	ENSG00000136527.19	ENST00000480461.1	538	2	11	239	1	-239	multi-exon	FALSE	canonical	3	88	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAGAATGCATGCT	-185903277	True	NA	12	True	NA	NA	NA	185938013	185931753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_185931853_185937824
transcript_104853.known	chr3	-	4082	13	FSM	ENSG00000244405.8	ENST00000306376.10	4082	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_7	27.0907682102635	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGAACCTGCCTCTTTCTT	-186102215	True	NA	-4	True	AATAAA	-27	NA	186109089	186046313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186048861_186052029_186052132_186057074_186057245_186057422_186057492_186064416_186064477_186065812_186066073_186079816_186080105_186081045_186081176_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_104855.nnic	chr3	-	674	6	NNC	ENSG00000244405.8	novel	642	6	NA	NA	94	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	115.149294396449	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	-186101582	False	NA	-5	True	AATAAA	-21	NA	186108456	186095119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108282
transcript_104856.nic	chr3	-	696	6	NIC	ENSG00000244405.8	novel	642	6	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	116.306491650294	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	-186101778	False	NA	-5	True	AATAAA	-21	NA	186108652	186095119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108456
transcript_104858.known	chr3	-	642	6	FSM	ENSG00000244405.8	ENST00000476890.1	642	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	81.8984737342522	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTACAGGTTGAGTATTA	-186102207	True	NA	-5	True	AATAAA	-21	NA	186109081	186095119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186095314_186105304_186105356_186105448_186105497_186105624_186105713_186105823_186105943_186108939
transcript_104867.nnic	chr3	-	468	3	NNC	ENSG00000197099.8	novel	534	3	NA	NA	3243	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTACCTCCATCACTTC	-186662447	False	NA	NA	False	AATAAA	-13	NA	186662460	186641509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_186641624_186641953_186642129_186662281
transcript_104870.known	chr3	-	2700	8	FSM	ENSG00000113838.13	ENST00000338733.10	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	13.7840487520902	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCTTTTTTTGTAAA	-186565565	True	NA	NA	False	AATAAA	-15	NA	186567339	186546066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186546956_186551128_186551280_186554253_186554752_186554897_186555085_186556408_186556776_186558416_186558573_186563993_186564373_186567266
transcript_104872.known	chr3	+	225	1	FSM	ENSG00000283390.1	ENST00000538831.3	225	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTCCAAGTGGGAGT	186596929	True	NA	NA	False	NA	NA	NA	186596975	186597200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186597000_186597200
transcript_104873.known	chr3	+	1640	10	FSM	ENSG00000090520.12	ENST00000265028.8	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	756	junction_4	67.5548245574486	1486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGACTCCTGTTTCTTC	186560489	True	NA	31	True	AATACA	-17	NA	186570719	186585793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186570966_186572094_186572252_186575839_186575938_186577667_186577801_186581370_186581514_186581994_186582078_186582715_186582774_186583864_186583977_186584429_186584590_186585343
transcript_104891.known	chr3	+	1889	11	FSM	ENSG00000156976.17	ENST00000440191.6	1889	11	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	570.907663287155	6195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693054	True	NA	23	True	AATAAA	-19	NA	186783576	186789897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_104892.known	chr3	+	1977	12	FSM	ENSG00000156976.17	ENST00000425053.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_11	775.944393935119	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATTCACTTTAAAGGTG	186693054	True	NA	7	True	AATAAA	-3	NA	186783576	186789881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186784961_186785102_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186788309_186788417_186789124
transcript_104893.known	chr3	+	5327	4	FSM	ENSG00000156976.17	ENST00000485101.5	5327	4	0	0	0	0	multi-exon	FALSE	canonical	3	1862	junction_1	284.223308137965	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTTTGGTCATTT	186693055	True	NA	20	True	AATAAA	-16	NA	186783577	186789894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186786052_186786163
transcript_104894.known	chr3	+	1729	10	FSM	ENSG00000156976.17	ENST00000443963.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	804.252033465464	2961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGGTCATTTTAT	186693074	True	NA	23	True	AATAAA	-19	NA	186783596	186789897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784428_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126_186787265_186787494_186787585_186787802_186787883_186789124
transcript_104895.known	chr3	-	1365	11	FSM	ENSG00000163918.12	ENST00000296273.7	1365	11	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_10	118.059349481521	2038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTAAAGTGAATATACAA	-186796334	True	NA	-63	True	AATAAA	-20	NA	186806482	186789899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806289
transcript_104896.known	chr3	+	460	2	FSM	ENSG00000156976.17	ENST00000496382.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	2041	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGGGTATAAAAGATGG	186787617	False	NA	70	True	NA	NA	NA	186787775	186789477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186787883_186789124
transcript_104897.known	chr3	-	1448	11	FSM	ENSG00000163918.12	ENST00000392481.6	1448	11	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_10	179.145332063105	2246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGAATATACAATTTAT	-186806640	True	NA	-58	True	AATAAA	-25	NA	186806695	186789894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186790065_186790141_186790256_186790325_186790407_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_104898.known	chr3	-	1111	9	FSM	ENSG00000163918.12	ENST00000433496.5	1111	9	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_2	282.853070294455	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTTAACATTCAAACTT	-186804714	False	10148	-43	True	AATAAA	-40	NA	186804724	186789879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186790065_186790141_186790256_186791724_186791851_186792489_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582
transcript_104899.known	chr3	-	701	7	FSM	ENSG00000163918.12	ENST00000418288.5	701	7	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	224.344229552118	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAGAAGGAAAATGTCAAA	-186796323	True	NA	NA	False	GATAAA	-29	NA	186806471	186792521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_186792611_186792803_186792948_186794657_186794778_186797534_186797615_186801116_186801196_186804582_186804725_186806424
transcript_10490.known	chr1	+	851	6	FSM	ENSG00000143450.19	ENST00000321531.10	851	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	1.72046505340853	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	151762907	True	NA	4	True	AATAAA	-15	NA	151762968	151771330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151768057_151768234_151770171_151770258_151771076
transcript_104900.known	chr3	+	909	7	FSM	ENSG00000156976.17	ENST00000475653.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	713.902129146566	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTATTCTCCTGTAGCA	186693070	True	NA	-40	True	AATAAA	-22	NA	186783592	186787386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186783640_186784431_186784478_186784563_186784697_186785882_186786052_186786163_186786274_186786501_186786646_186787126
transcript_104901.known	chr3	+	360	1	FSM	ENSG00000223803.1	ENST00000412545.1	360	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTTAATAAATT	NA	False	NA	NA	False	NA	NA	NA	186900197	186900557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186900200_186900600
transcript_104902.known	chr3	+	4604	8	FSM	ENSG00000073849.16	ENST00000169298.8	4604	8	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	47.9723559852496	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921204	True	NA	20	True	AATAAA	-20	NA	186930525	187078553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187042653_187043311_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_104903.known	chr3	+	3947	7	FSM	ENSG00000073849.16	ENST00000457772.6	3947	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	104.774360731367	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTCTCTCTTCTTATT	186921204	True	NA	20	True	AATAAA	-20	NA	186930525	187078553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_186930835_186963784_186963927_187038741_187038874_187051248_187051347_187072848_187072948_187074158_187074334_187075561
transcript_104934.known	chr3	-	653	2	FSM	ENSG00000163923.10	ENST00000455270.5	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187134039	True	NA	-2	True	AATAAA	-26	NA	187139484	187120947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187121329_187139212
transcript_104939.known	chr3	-	749	4	FSM	ENSG00000163923.10	ENST00000433055.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	234.623575589117	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187180854	False	NA	-2	True	AATAAA	-26	NA	187180908	187120947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187121329_187127998_187128063_187173615_187173676_187180664
transcript_104940.known	chr3	-	729	3	FSM	ENSG00000163923.10	ENST00000296277.9	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	102	3504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTGTCATCTTTAAAA	-187134051	True	NA	-2	True	AATAAA	-26	NA	187139496	187120947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187121329_187127998_187128063_187139212
transcript_104955.nnic	chr3	+	1675	4	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19118	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.2868320729373	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	187178235	False	NA	30	True	NA	NA	NA	187178367	187200461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187178875_187191710_187191770_187197589_187197788_187199550
transcript_104956.nnic	chr3	+	1314	4	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-18763	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.3045763140937	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	187178535	True	NA	30	True	NA	NA	NA	187178722	187200461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187178875_187186137_187186191_187197589_187197788_187199550
transcript_104960.nnic	chr3	+	2145	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19647	-1001	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	10	228	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	187177706	False	NA	30	True	NA	NA	NA	187177838	187200461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187178875_187197589_187197788_187199550
transcript_104962.nnic	chr3	+	1437	3	NNC	ENSG00000175077.6	novel	2214	2	NA	NA	-19152	-1001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTTTAACTACTT	187178201	False	NA	30	True	NA	NA	NA	187178333	187200461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_187178662_187197589_187197788_187199550
transcript_104964.nic	chr3	-	1646	5	ISM	ENSG00000127241.18	ENST00000169293.10	2440	9	-29	9755	-6	469	5prime_fragment	FALSE	canonical	3	11	junction_4	2.48746859276655	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTACTCAACTTGTGGTT	-187291976	False	NA	NA	False	AATAAA	-25	NA	187291986	187256115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_187256861_187260740_187260873_187262542_187262721_187285824_187286057_187291627
transcript_104968.known	chr3	-	607	2	FSM	ENSG00000157005.4	ENST00000287641.4	607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATTTGGTTTCTATTG	-187670348	True	NA	3	True	AATAAA	-23	NA	187670394	187668911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187669278_187670153
transcript_104969.known	chr3	-	3306	10	FSM	ENSG00000113916.18	ENST00000406870.7	3306	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	5.97112393001973	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTGGTCTGGAGGGCT	-187744901	True	NA	-4	True	AATAAA	-17	NA	187745468	187721380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_187722602_187724940_187725079_187725498_187725630_187726730_187726899_187728359_187728545_187729049_187730022_187731708_187731931_187733532_187733704_187734868_187734908_187745409
transcript_10498.known	chr1	+	745	5	FSM	ENSG00000143450.19	ENST00000635322.1	745	5	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	1.92028643696715	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTGTTCACGGTTTCTT	NA	False	NA	4	True	AATAAA	-15	NA	151762898	151771330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151763168_151767162_151767224_151767224_151767300_151770171_151770258_151771076
transcript_104988.known	chr3	-	697	2	FSM	ENSG00000234076.1	ENST00000444488.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCTGGCCAACATGGTGA	-188947627	False	NA	NA	False	NA	NA	NA	188947639	188941714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_188942051_188947278
transcript_104989.known	chr3	-	3477	15	FSM	ENSG00000090530.10	ENST00000319332.10	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_14	26.8663548031392	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGGCATTTATTTTTGT	-190119001	True	NA	-33	True	AATAAA	-17	NA	190120897	189956727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_189958005_189963957_189964099_189970815_189970892_189971889_189972008_189972873_189973025_189973908_189974005_189974557_189974686_189983045_189983141_189984549_189984591_189986787_189986878_189987526_189987670_189988906_189989039_189994093_189994284_189995289_189995443_190120251
transcript_104995.nnic	chr3	+	787	3	NNC	ENSG00000225764.3	novel	807	4	NA	NA	23941	4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	190144872	True	NA	NA	False	ATTAAA	-21	NA	190144904	190150166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_190145136_190145265_190145446_190149790
transcript_104996.known	chr3	-	3446	4	FSM	ENSG00000163347.6	ENST00000295522.4	3446	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	1.24721912892465	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATTGGCTTGTTTTCT	-190322040	True	NA	-5	True	AATAAA	-22	NA	190322446	190305706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_190308440_190310168_190310254_190312871_190313037_190321983
transcript_104998.known	chr3	+	1957	8	FSM	ENSG00000196083.10	ENST00000422940.5	1957	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	4.3705881545081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	190513648	True	NA	27	True	AATAAA	-43	NA	190514101	190630285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_190514220_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_104999.known	chr3	+	2048	9	FSM	ENSG00000196083.10	ENST00000422485.5	2048	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	6.86362695664617	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGACTGTGTCTAAAACTT	190513644	True	NA	27	True	AATAAA	-43	NA	190514097	190630285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_190514220_190556129_190556217_190564288_190564354_190604127_190604414_190608994_190609182_190620274_190620441_190623343_190623416_190627322_190627450_190629349
transcript_1050.nic	chr1	-	762	5	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-265	13870	-265	-7836	5prime_fragment	FALSE	canonical	3	85	junction_1	11.9869720947369	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGCACGAACGTCGGAAA	NA	False	NA	17	True	AAAAAG	-4	NA	1659277	1649607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_105001.known	chr3	+	1926	11	FSM	ENSG00000152492.15	ENST00000392456.4	1926	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_5	31.8113187403478	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	NA	False	NA	20	True	AATAAA	-27	NA	191329084	191392175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_191329724_191357087_191357151_191357997_191358125_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_105005.nnic	chr3	+	1200	9	NNC	ENSG00000152492.15	novel	420	2	NA	NA	-1902	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	87.5881698632869	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAATGTATGATATTTTG	191359087	True	NA	20	True	AATAAA	-27	NA	191359200	191392175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_191359304_191361068_191361160_191369918_191370037_191380158_191380275_191380686_191380732_191380827_191380933_191382745_191382826_191389495_191389603_191391740
transcript_105011.known	chr3	-	3058	5	FSM	ENSG00000114279.15	ENST00000454309.6	3058	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	10.356157588604	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAAAAACACAAAA	-192408863	True	NA	6	True	NA	NA	NA	192409049	192142508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192408024
transcript_105012.nnic	chr3	-	1140	5	NNC	ENSG00000114279.15	novel	3058	5	NA	NA	-105865	-51	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	16.7537309277665	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTGGAGAATTGAACTC	-192514903	False	NA	-22	True	AATAAA	-31	NA	192514914	192143649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_192144128_192170457_192170657_192335360_192335465_192360427_192360539_192514666
transcript_105031.known	chr3	-	3063	2	FSM	ENSG00000180611.7	ENST00000392452.3	3063	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTGTTTGTAATC	-192915599	True	NA	0	True	AATAAA	-25	NA	192917856	192796814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_192799651_192917629
transcript_105035.nnic	chr3	+	1094	6	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	29.2438027622948	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	12	True	AATAAA	-22	NA	193240611	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193251366_193251501_193254645_193254739_193255650_193255790_193262969_193263236_193270603
transcript_105036.nnic	chr3	+	1056	6	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	28.667751917442	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	12	True	AATAAA	-22	NA	193240611	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193251366_193251501_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_105038.nnic	chr3	+	1020	6	NNC	ENSG00000127252.7	novel	969	4	NA	NA	-498	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	29.36256119619	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240540	True	NA	12	True	AATAAA	-22	NA	193240629	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193241417_193241534_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_10504.known	chr1	+	992	2	FSM	ENSG00000203288.5	ENST00000389897.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTGTCTGGCTTCC	151790575	True	NA	6	True	TATAAA	-20	NA	151790841	151794402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151791246_151793814
transcript_105040.nnic	chr3	+	1001	5	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-516	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	29.3545141332641	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	NA	False	NA	12	True	AATAAA	-22	NA	193240611	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193251366_193251501_193255650_193255790_193262969_193263236_193270603
transcript_105041.nnic	chr3	+	914	5	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-508	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.0613955098562	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240530	True	NA	12	True	AATAAA	-22	NA	193240619	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193254683_193254739_193255650_193255790_193262969_193263236_193270603
transcript_105046.nnic	chr3	+	720	4	NNC	ENSG00000127252.7	novel	498	3	NA	NA	-369	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.539591789457	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240669	False	NA	12	True	AATAAA	-22	NA	193240758	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_193240822_193255650_193255790_193262969_193263236_193270603
transcript_105047.known	chr3	+	969	4	FSM	ENSG00000127252.7	ENST00000264735.4	969	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	9.17726659862414	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGCCAATGAAATTT	193240918	True	NA	12	True	AATAAA	-22	NA	193241221	193270855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193241534_193255650_193255790_193262969_193263236_193270603
transcript_105049.known	chr3	+	6397	30	FSM	ENSG00000198836.11	ENST00000361908.8	6397	30	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_6	44.6782126687836	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583162	True	NA	10	True	TATAAA	-19	NA	193593185	193697811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_10505.known	chr1	+	553	2	FSM	ENSG00000203288.5	ENST00000533481.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCCGCGCTAGGGGCTCA	151790537	True	NA	NA	False	NA	NA	NA	151790803	151791545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_151791246_151791434
transcript_105052.known	chr3	+	6328	29	FSM	ENSG00000198836.11	ENST00000361828.7	6328	29	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	55.0833667808928	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCCAAGGCTGTCA	193583120	True	NA	10	True	TATAAA	-19	NA	193593143	193697811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_105056.known	chr3	+	6330	29	FSM	ENSG00000198836.11	ENST00000361150.6	6330	29	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	72.9290523980222	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTGCCAAGGCTGTC	193583120	True	NA	9	True	TATAAA	-18	NA	193593143	193697810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_193593410_193614722_193615042_193615673_193615771_193618868_193618937_193626091_193626203_193631611_193631666_193635417_193635523_193637194_193637282_193637951_193638066_193642764_193642846_193642974_193643050_193643372_193643445_193643527_193643628_193643974_193644106_193645552_193645626_193645727_193645801_193647064_193647181_193648069_193648135_193648794_193648872_193654861_193655028_193657079_193657233_193658886_193658996_193659481_193659562_193662821_193662963_193664879_193664997_193666295_193666390_193667169_193667281_193692062_193692133_193694605
transcript_105058.nic	chr3	+	1643	6	ISM	ENSG00000198836.11	ENST00000361908.8	6397	30	-51	70944	-9	7930	5prime_fragment	FALSE	canonical	3	248	junction_5	41.7152250383478	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCTGTTGGTGCAAT	193583111	True	NA	NA	False	AATAAA	-19	NA	193593134	193626867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_193593410_193614722_193615042_193615673_193615771_193617177_193617286_193618868_193618937_193626091
transcript_105060.known	chr3	-	772	2	FSM	ENSG00000214146.3	ENST00000414309.1	772	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGCGGGCCACCTCCTCG	-194003615	True	NA	NA	False	NA	NA	NA	194003636	194001856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194002577_194003584
transcript_105062.known	chr3	+	1009	2	FSM	ENSG00000114315.4	ENST00000476918.1	1009	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACTTAGGACTGTGGC	194131763	True	NA	NA	False	NA	NA	NA	194136147	194137284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194136489_194136616
transcript_105063.known	chr3	+	1575	4	FSM	ENSG00000114315.4	ENST00000232424.4	1575	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_2	32.2524762184584	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAACTTTTCACCAATCCT	194131763	True	NA	15	True	ATTAAA	-21	NA	194136147	194138732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194136489_194136616_194136713_194136960_194137049_194137682
transcript_105064.known	chr3	-	1488	3	FSM	ENSG00000225742.6	ENST00000654010.1	1488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTGTGAGTGTGGA	NA	False	NA	NA	False	ATTAAA	-18	NA	194205737	194203015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194203680_194204818_194204967_194205061
transcript_105065.known	chr3	-	840	3	FSM	ENSG00000225742.6	ENST00000415869.6	840	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGTGTGTGTGAGTGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	194205797	194203017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194203680_194204818_194204967_194205767
transcript_105067.known	chr3	+	686	4	FSM	ENSG00000233058.3	ENST00000661941.1	686	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.86744175568088	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTCTTTCTTTCTTTC	194486662	True	NA	NA	False	AATAAA	-12	NA	194487139	194513861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194487173_194488598_194488727_194497937_194498136_194513534
transcript_10507.known	chr1	-	1224	7	FSM	ENSG00000143436.11	ENST00000368830.8	1224	7	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_3	57.7429649394625	3566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-151750968	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_105073.nnic	chr3	+	588	3	NNC	ENSG00000231770.7	novel	1125	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	194583482	True	NA	6	True	AATAAA	-20	NA	194583990	194590249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_194584062_194589020_194589143_194589854
transcript_105074.nnic	chr3	+	1007	3	NIC	ENSG00000231770.7	novel	1119	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGAATCGAGTACTAAT	194583492	True	NA	17	True	AATAAA	-31	NA	194584000	194590260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_194584449_194589473_194589627_194589854
transcript_105075.known	chr3	+	972	2	FSM	ENSG00000229334.1	ENST00000447139.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACAGGGCCCTGTAATGC	NA	False	NA	NA	False	AATAAA	-23	NA	194632922	194645401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194633168_194644674
transcript_105078.known	chr3	+	905	1	FSM	ENSG00000231770.7	ENST00000666676.1	905	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAATTTGTTTTTAT	194583495	True	NA	NA	False	AATGAA	-17	NA	194584003	194584908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194584000_194584900
transcript_105079.known	chr3	-	160	1	FSM	ENSG00000272707.1	ENST00000609789.1	160	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGGTGTTTTTGTTTTTG	-194637625	False	NA	-3	True	NA	NA	NA	194637664	194637504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194637500_194637700
transcript_10508.known	chr1	-	531	3	FSM	ENSG00000143436.11	ENST00000468006.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	267.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGTAAGTGTTGCTT	-151748991	False	NA	-12	True	AATAAA	-13	NA	151761519	151759653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151760032_151760815_151760900_151761450
transcript_105080.known	chr3	+	1101	4	FSM	ENSG00000231770.7	ENST00000447982.7	1125	4	23	1	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.82842712474619	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACTGATAATAACTGAAT	194583505	True	NA	6	True	AATAAA	-20	NA	194584013	194590249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_194584449_194589024_194589143_194589473_194589627_194589854
transcript_105081.known	chr3	-	3283	14	FSM	ENSG00000041802.11	ENST00000265245.10	3283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.7092480930166	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCTCTGGTATTTCT	-194661730	True	NA	-14	True	ATTAAA	-18	NA	194672191	194640790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_194642248_194644572_194644747_194646163_194646244_194648680_194648805_194650880_194651025_194651114_194651217_194652728_194653143_194658956_194659134_194660072_194660134_194665556_194665644_194666202_194666290_194666451_194666573_194670008_194670136_194672063
transcript_105083.known	chr3	-	578	2	FSM	ENSG00000114331.16	ENST00000490224.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAGGTTGCGTTTTAC	-195438726	True	NA	NA	False	NA	NA	NA	195443044	195441792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195442121_195442794
transcript_105084.known	chr3	-	3386	6	FSM	ENSG00000184203.8	ENST00000618156.5	3386	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_5	29.0585615610959	290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGCCTGTGTGTGGATT	-195538662	True	NA	-8	True	AATAAA	-15	NA	195543325	195514427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195516943_195519017_195519186_195523691_195523787_195524818_195524897_195529793_195529902_195542903
transcript_105085.known	chr3	+	474	1	FSM	ENSG00000236844.1	ENST00000454858.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCAGATTAGATTTTTA	NA	False	NA	NA	False	AAAACA	-5	NA	195554609	195555083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_195554600_195555100
transcript_105089.known	chr3	+	2131	14	FSM	ENSG00000242086.8	ENST00000429897.5	2131	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	39.3456838831998	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGTGAAAGTAG	195655841	True	NA	NA	False	AATAAA	-11	NA	195658064	195688862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_195658166_195661755_195661842_195662570_195662734_195664085_195664251_195666065_195666215_195668518_195668642_195671131_195671301_195672483_195672680_195673817_195673988_195677726_195677849_195681189_195681302_195681535_195681667_195683751_195683866_195688532
transcript_10509.known	chr1	-	1264	7	FSM	ENSG00000143436.11	ENST00000467306.5	1264	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	229.626810765255	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTTGCTTACTGGTC	-151750968	True	NA	-5	True	AATAAA	-20	NA	151763496	151759646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151760182_151760815_151760900_151761450_151761553_151762104_151762156_151762375_151762501_151762949_151763147_151763326
transcript_105090.nnic	chr3	-	780	2	NNC	ENSG00000145113.22	novel	3806	23	NA	NA	3235	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAATTCCATTCTTGAT	NA	False	NA	1	True	AATAAA	-29	NA	195749285	195746764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_195747381_195749121
transcript_105091.nic	chr3	-	2288	15	NIC	ENSG00000185485.14	novel	2491	17	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	42.3597927381181	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTGAAAGTAGATAAAATTT	-195986038	True	NA	NA	False	AATAAA	-20	NA	195990316	195959747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_195960087_195963299_195963422_195965428_195965543_195967513_195967645_195967878_195967991_195971322_195971445_195974396_195974567_195975704_195975901_195977082_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_105098.nic	chr3	-	1578	7	NIC	ENSG00000185485.14	novel	2000	15	NA	NA	2	3258	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	41.031491970599	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCAGACTTTTTTTTTTC	-195986038	True	NA	NA	False	AATAAA	-17	NA	195990316	195976486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_195977252_195979743_195979867_195982161_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_105099.known	chr3	-	548	5	FSM	ENSG00000185485.14	ENST00000435731.5	548	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	45.1829613903294	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTGTGGAGTATTT	-195986027	True	NA	NA	False	NA	NA	NA	195990305	195982292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_195982311_195984111_195984277_195985626_195985790_195986518_195986605_195990189
transcript_10510.known	chr1	-	882	6	FSM	ENSG00000143436.11	ENST00000368829.3	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	227.558695724861	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCACTGGGGCAGGGAAG	-151750956	True	NA	NA	False	NA	NA	NA	151763484	151759874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151760182_151760815_151760900_151762104_151762156_151762375_151762501_151762989_151763147_151763326
transcript_105101.known	chr3	-	5012	19	FSM	ENSG00000072274.13	ENST00000360110.9	5012	19	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_10	30.937212400459	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATTTCTTTAGATAA	-196070608	True	NA	-2	True	AATAAA	-16	NA	196082090	196049283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196052185_196053417_196053559_196055079_196055302_196058283_196058366_196058573_196058633_196060179_196060248_196062581_196062646_196062853_196062940_196064308_196064429_196065442_196065601_196067517_196067658_196068031_196068131_196069454_196069569_196071395_196071499_196072002_196072153_196073929_196074126_196075158_196075361_196077063_196077123_196082042
transcript_105104.nic	chr3	-	591	2	ISM	ENSG00000072274.13	ENST00000464011.1	546	4	-37	2420	-31	-2420	5prime_fragment	FALSE	canonical	3	414	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGAGTGTCATGGCGC	-196070645	True	NA	NA	False	AATACA	-14	NA	196082127	196076616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196077123_196082042
transcript_105109.nnic	chr3	-	950	4	NNC	ENSG00000163958.14	novel	1308	8	NA	NA	3817	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	17.6320415405843	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	-196207146	True	NA	-8	True	ATTAAA	-20	NA	196207569	196197451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196197726_196198275_196198452_196198788_196198875_196207155
transcript_10511.known	chr1	-	693	2	FSM	ENSG00000143436.11	ENST00000462783.1	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTTAGGAAAAATAAG	-151750961	True	NA	NA	False	NA	NA	NA	151763489	151762616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151763147_151763326
transcript_105113.nnic	chr3	-	609	3	NIC	ENSG00000163958.14	novel	1813	8	NA	NA	3830	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	19.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	-196207133	True	NA	-8	True	ATTAAA	-20	NA	196207556	196197451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196197726_196198275_196198452_196207397
transcript_105116.known	chr3	-	572	3	FSM	ENSG00000163958.14	ENST00000460442.5	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTGTCACGCTGCGCATG	-196198889	False	NA	-8	True	ATTAAA	-20	NA	196198910	196197451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196197726_196198275_196198452_196198788
transcript_105123.known	chr3	-	5597	10	FSM	ENSG00000161217.12	ENST00000292823.6	5597	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_9	38.2186690854963	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284632	True	NA	-2	True	AATAAA	-21	NA	196287713	196234367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196283474_196283539_196287614
transcript_105126.known	chr3	+	1430	9	FSM	ENSG00000163959.10	ENST00000296327.10	1430	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	3.69966214673719	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGGGCACCTTGCCTCT	196216357	True	NA	11	True	AATAAA	-23	NA	196216533	196233427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196216751_196217841_196217937_196226964_196227120_196227663_196227738_196228114_196228274_196228808_196228921_196229914_196230062_196232418_196232525_196233062
transcript_105129.known	chr3	-	5546	9	FSM	ENSG00000161217.12	ENST00000431016.6	5546	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	17.5979402203781	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCATGTCCAGTGGTGT	-196284645	True	NA	-2	True	AATAAA	-21	NA	196287726	196234367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196238895_196239546_196239736_196241947_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_105148.nic	chr3	-	1150	7	ISM	ENSG00000161217.12	ENST00000431016.6	5546	9	-32	7292	-6	0	5prime_fragment	FALSE	canonical	3	45	junction_6	19.3620476419435	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTCTCTCTTCTTCGGT	NA	False	NA	3	True	AATAAA	-22	NA	196287758	196241659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196242091_196242561_196242641_196247366_196247519_196248206_196248324_196257787_196257888_196270414_196270542_196287614
transcript_105164.known	chr3	-	603	5	FSM	ENSG00000213123.11	ENST00000426563.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	101.993872364961	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315754	True	NA	0	True	AATAAA	-25	NA	196318214	196291218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318035
transcript_105176.nnic	chr3	-	650	4	NIC	ENSG00000213123.11	novel	603	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	118.643256117751	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315865	True	NA	0	True	AATAAA	-25	NA	196318325	196291218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196291375_196306942_196307013_196316097_196316232_196318035
transcript_105181.known	chr3	+	322	2	FSM	ENSG00000235897.1	ENST00000420226.1	322	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGTGAATTTTGTTGT	196318293	True	NA	NA	False	TTTAAA	-23	NA	196318329	196323673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196318438_196323459
transcript_105183.known	chr3	-	625	5	FSM	ENSG00000213123.11	ENST00000325318.10	625	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	120.759057631302	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTGTGTTTTAGGCCTT	-196315780	True	NA	0	True	AATAAA	-25	NA	196318240	196291218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005_196296070_196306942_196307013_196316097_196316232_196318039
transcript_105184.known	chr3	-	800	6	FSM	ENSG00000213123.11	ENST00000446494.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	131.609118225144	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTTGTGTTTTAGGCC	-196315839	True	NA	-2	True	AATAAA	-23	NA	196318299	196291220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196291375_196296005_196296070_196305655_196305774_196306942_196307013_196316097_196316232_196318039
transcript_105185.known	chr3	-	10521	11	FSM	ENSG00000163960.12	ENST00000296328.9	10521	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	8.33306666239986	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTTTTTTTGTGTTGTT	-196421959	True	NA	-7	True	AATAAA	-19	NA	196432427	196347661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196407245_196407394_196432326
transcript_105188.known	chr3	-	3158	10	FSM	ENSG00000163960.12	ENST00000429160.1	3158	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.1847911677824	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAATTGTATAAATATTT	-196421959	True	NA	NA	False	NA	NA	NA	196432427	196354876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196356847_196361843_196361924_196362293_196362688_196368027_196368156_196369420_196369512_196371895_196372043_196391812_196391926_196393553_196393620_196402951_196403020_196432326
transcript_105192.nic	chr3	-	425	2	ISM	ENSG00000163960.12	ENST00000493566.1	921	4	-50	6991	-47	-6991	5prime_fragment	FALSE	canonical	3	46	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTGGAAATTTTTGTAG	-196422009	True	NA	NA	False	AATAAA	-29	NA	196432477	196407119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_196407394_196432326
transcript_105193.known	chr3	-	5347	6	FSM	ENSG00000163961.4	ENST00000318037.3	5347	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.87442304278158	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTATTATGTGTATTTT	-196498445	True	NA	-16	True	AATAAA	-17	NA	196503768	196468782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196472773_196475230_196475313_196483769_196483892_196487398_196487579_196488606_196488684_196502872
transcript_105199.nnic	chr3	-	1327	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	-68	-24349	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTCATTGATAATTT	NA	False	NA	NA	False	AGTAAA	-17	NA	196503836	196496108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196496472_196502872
transcript_10520.nnic	chr1	+	2029	4	NNC	ENSG00000234614.1	novel	506	3	NA	NA	-2994	1164	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	2.86744175568088	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAAAGTTCTGATTTTTT	151838411	True	NA	10	True	AGTAAA	-25	NA	151838882	151851549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_151839106_151841740_151842032_151844044_151844243_151850232
transcript_105200.nnic	chr3	-	1375	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	-28	-24349	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTTCATTGATAATTT	-196498473	True	NA	NA	False	AGTAAA	-17	NA	196503796	196496108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196496560_196502872
transcript_105201.nnic	chr3	-	1222	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	-68	-24454	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATTTGTGGTACTTTTC	NA	False	NA	-3	True	AATAAA	-20	NA	196503836	196496213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196496472_196502872
transcript_105202.nnic	chr3	-	1270	2	NNC	ENSG00000163961.4	novel	5347	6	NA	NA	-28	-24454	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAATTTGTGGTACTTTTC	-196498473	True	NA	-3	True	AATAAA	-20	NA	196503796	196496213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196496560_196502872
transcript_105205.known	chr3	+	171	1	FSM	ENSG00000225770.1	ENST00000439929.1	171	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATCTTCCTTCAAAGGGT	196536499	False	NA	NA	False	NA	NA	NA	196536531	196536702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196536500_196536700
transcript_105215.known	chr3	-	1594	4	FSM	ENSG00000185798.8	ENST00000332629.7	1594	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	35.6495285928003	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567622	True	NA	-5	True	AATAAA	-25	NA	196568554	196554176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196554808_196560995_196561492_196566876_196567308_196568518
transcript_105224.nnic	chr3	-	1196	3	NIC	ENSG00000185798.8	novel	1594	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	31.5	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTTTTTCAGATTAAAAAA	-196567655	True	NA	-5	True	AATAAA	-25	NA	196568587	196554176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_196554808_196560995_196561492_196568518
transcript_105232.known	chr3	-	683	2	FSM	ENSG00000185798.8	ENST00000429115.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCAAAACTGTTTTTC	-196567649	True	NA	-16	True	AATAAA	-14	NA	196568581	196554187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196554808_196568518
transcript_105236.known	chr3	-	616	2	FSM	ENSG00000185798.8	ENST00000456677.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCTTTTGCACAGAGT	-196567288	False	NA	NA	False	NA	NA	NA	196567310	196560995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196561492_196567190
transcript_105237.known	chr3	-	348	2	FSM	ENSG00000232065.2	ENST00000441644.2	461	2	113	0	113	0	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGTTACCACATTTCCAC	-196632574	False	NA	NA	False	AATAAA	-29	NA	196632587	196631497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196631646_196632387
transcript_105238.nnic	chr3	-	552	2	NNC	ENSG00000232065.2	novel	461	2	NA	NA	-168	-5	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGGGTGTTACCACATT	-196632855	True	NA	NA	False	AATAAA	-24	NA	196632868	196631502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_196631646_196632459
transcript_10524.known	chr1	-	1832	7	FSM	ENSG00000159445.13	ENST00000471464.5	1832	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	24.3903441732356	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGCTGTACTGTTGTTT	-151908143	True	NA	NA	False	ATTAAA	-19	NA	151909502	151874054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151889982_151890215_151895007_151895195_151909359
transcript_105240.known	chr3	+	838	4	FSM	ENSG00000163964.18	ENST00000451319.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	56.8409085860605	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTGTTGATGTTTTGTG	196712664	False	NA	NA	False	NA	NA	NA	196712680	196728110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196713125_196716857_196716922_196722414_196722557_196727922
transcript_105241.known	chr3	-	2158	3	FSM	ENSG00000174007.9	ENST00000409690.5	2158	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTCTACCTGTTC	-196712080	True	NA	NA	False	AATAAA	-15	NA	196712250	196706276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196707913_196708527_196708728_196711928
transcript_105243.known	chr3	+	6139	15	FSM	ENSG00000180370.10	ENST00000327134.7	6139	15	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_9	17.1899650365899	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTGTGCCATCATTTT	196732994	True	NA	NA	False	GATAAA	-18	NA	196739856	196832647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196740158_196782625_196782834_196801926_196802028_196803016_196803165_196805351_196805384_196806578_196806687_196807781_196807915_196810589_196810654_196812218_196812268_196812738_196812852_196814450_196814569_196818056_196818157_196820370_196820568_196827195_196827334_196828318
transcript_105247.known	chr3	-	564	5	FSM	ENSG00000114503.11	ENST00000411704.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	441.269404672474	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAACCAGTGAGTGGTGAG	-196932567	True	NA	NA	False	NA	NA	NA	196942436	196937022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941486_196941603_196942369
transcript_105250.known	chr3	-	676	4	FSM	ENSG00000114503.11	ENST00000422610.5	676	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	417.818940052586	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTACCAAGATTTGATC	-196941894	False	NA	-87	True	NA	NA	NA	196941906	196936925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941708
transcript_105251.known	chr3	-	1133	4	FSM	ENSG00000114503.11	ENST00000452404.6	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	385.344867186092	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTGTTCTTTGACAACA	-196932571	True	NA	62	True	NA	NA	NA	196942440	196936776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196941934
transcript_105252.known	chr3	-	2216	4	FSM	ENSG00000114503.11	ENST00000447325.5	2216	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	412.17067662155	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-196942365	False	NA	-8	True	AATAAA	-16	NA	196942377	196935405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942159
transcript_105253.known	chr3	-	2220	4	FSM	ENSG00000114503.11	ENST00000428425.1	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	377.345406167288	2033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCGTTGTTGCTGCCTGTT	-196942582	False	NA	-11	True	AATAAA	-13	NA	196942594	196935408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942369
transcript_105263.known	chr3	-	2101	4	FSM	ENSG00000114503.11	ENST00000321256.10	2101	4	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_2	22.8619042659763	3002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTGCTGCCTGTTTCC	-196932659	True	NA	-8	True	AATAAA	-16	NA	196942528	196935405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937649_196939250_196939433_196942425
transcript_105264.known	chr3	-	1946	4	FSM	ENSG00000114503.11	ENST00000427641.2	1946	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	396.615963145991	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTTCAATAAAGCTGGAT	-196932691	True	NA	7	True	NA	NA	NA	196942560	196935433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937083_196937509_196937632_196939392_196939433_196942425
transcript_105265.known	chr3	-	1096	3	FSM	ENSG00000114503.11	ENST00000468923.5	1096	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	14	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGAATCTTGGCCATGT	-196932654	True	NA	6	True	ATTAAA	-34	NA	196942523	196936832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196937649_196939250_196939433_196942425
transcript_105266.known	chr3	-	4161	2	FSM	ENSG00000114503.11	ENST00000463783.1	4161	2	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTTGTTGCTGCCTGTTTC	-196932691	True	NA	-9	True	AATAAA	-15	NA	196942560	196935406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_196939433_196942425
transcript_105267.known	chr3	+	870	1	FSM	ENSG00000270170.2	ENST00000602845.2	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGTGCTGGGACTTG	196932528	True	NA	20	True	AATAAA	-20	NA	196942673	196943543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_196942700_196943500
transcript_105270.known	chr3	-	629	5	FSM	ENSG00000163975.13	ENST00000439320.1	629	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.95823643358446	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCCGTGTAAACCCGCG	-197029407	True	NA	NA	False	NA	NA	NA	197029787	197023853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197023911_197024302_197024486_197026659_197026760_197027755_197027911_197029653
transcript_105271.known	chr3	+	468	2	ISM	ENSG00000228109.2	ENST00000414354.2	678	3	603	2	113	2	3prime_fragment	FALSE	canonical	3	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGAATGTCTATGTAAA	197003713	False	NA	5	True	AATAAA	-17	NA	197003749	197004740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_197003971_197004493
transcript_105272.known	chr3	-	4272	25	FSM	ENSG00000075711.21	ENST00000659716.1	4272	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	78.3396717293777	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTGGAGTTGTTTATTA	-197296973	True	NA	-45	True	NA	NA	NA	197298612	197043074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197075836_197075871_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_105273.known	chr3	-	4853	25	FSM	ENSG00000075711.21	ENST00000667157.1	4853	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	60.2305754764324	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTTGTTAAGTGATTTT	-197296973	True	NA	1	True	ATTAAA	-25	NA	197298612	197042559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076686_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_105282.nic	chr3	-	1353	5	ISM	ENSG00000075711.21	ENST00000419227.5	1771	15	-74	124602	-19	518	5prime_fragment	FALSE	canonical	3	19	junction_4	98.0851033541791	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATCATCTTTAAATTCC	-197298602	False	NA	NA	False	AAAAAG	-6	NA	197298650	197193818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298417
transcript_105283.nic	chr3	-	1230	5	ISM	ENSG00000075711.21	ENST00000471733.5	2605	17	-14	113341	-14	518	5prime_fragment	FALSE	canonical	3	40	junction_4	89.1178994366452	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACATCATCTTTAAATTCC	-197297006	True	NA	NA	False	AAAAAG	-6	NA	197298645	197193818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_105288.known	chr3	-	4436	25	FSM	ENSG00000075711.21	ENST00000657381.1	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_24	66.8908729864463	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCATTCCATTTATGAAG	-197296984	True	NA	45	True	NA	NA	NA	197298623	197042984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197044730_197051576_197051669_197059888_197059999_197065275_197065449_197065707_197065810_197066703_197066755_197069218_197069261_197076585_197076683_197081050_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_105289.known	chr3	-	2605	17	FSM	ENSG00000075711.21	ENST00000471733.5	2605	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_16	59.1405899108218	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-197296992	True	NA	NA	False	NA	NA	NA	197298631	197080477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197081118_197085579_197085757_197090911_197091027_197104902_197105006_197115926_197116084_197119409_197119531_197130526_197130672_197136541_197136679_197138221_197138392_197140139_197140265_197142717_197142769_197149742_197149797_197194424_197194590_197282678_197282846_197296345_197296478_197297185_197297236_197298535
transcript_10529.known	chr1	-	4798	6	FSM	ENSG00000159445.13	ENST00000368814.8	4798	6	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_4	20.2128671889962	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTGTTGGAAGAATTTT	-151908152	True	NA	NA	False	AATAAA	-21	NA	151909511	151870865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151874929_151877000_151877126_151888272_151888384_151889213_151889374_151895007_151895195_151909359
transcript_105291.known	chr3	-	3527	8	FSM	ENSG00000161267.12	ENST00000392379.6	3527	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	57.0864006822741	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197555968	197509782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197554561_197554714_197555780
transcript_105293.known	chr3	-	3455	7	FSM	ENSG00000161267.12	ENST00000392378.6	3455	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	12.4152683776425	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGGAGTTGCACGTGTG	NA	False	NA	-7	True	ATTAAA	-15	NA	197556048	197509782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_105294.known	chr3	-	1605	7	FSM	ENSG00000161267.12	ENST00000441275.5	1605	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	70.9023193477399	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATCTCATTTGATCCTTAA	NA	False	NA	-25	True	ATTAAA	-4	NA	197555987	197511593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532515_197533484_197533562_197554561_197554714_197555780
transcript_105297.known	chr3	-	868	6	FSM	ENSG00000161267.12	ENST00000446746.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	56.1854073581388	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCCATCGCCAAGAAGAT	NA	False	NA	NA	False	NA	NA	NA	197555972	197512167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197512365_197514263_197514417_197522639_197522782_197532411_197532523_197533488_197533562_197555780
transcript_105299.nic	chr3	-	669	5	NIC	ENSG00000161267.12	novel	5154	12	NA	NA	21	1779	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	59.9306891333647	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTGTATTTTTGTTAT	NA	False	NA	NA	False	AATGAA	-1	NA	197556027	197530632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_197530745_197532411_197532523_197533488_197533562_197546360_197546487_197555780
transcript_1053.nic	chr1	-	695	4	ISM	ENSG00000248333.9	ENST00000611150.3	2350	19	-265	16738	-265	-10704	5prime_fragment	FALSE	canonical	3	95	junction_3	9.7410927974683	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACGTAGGCATCGTAG	NA	False	NA	-15	True	AAAAAG	-30	NA	1659277	1652475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1652567_1655368_1655485_1657374_1657499_1658913
transcript_105302.nic	chr3	-	562	2	ISM	ENSG00000161267.12	ENST00000432819.5	955	7	-31	40117	-17	-14	5prime_fragment	FALSE	canonical	3	22	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAGTGATTCAACATT	NA	False	NA	NA	False	AATAAA	-16	NA	197556011	197554382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_197554714_197555780
transcript_105303.known	chr3	-	680	2	FSM	ENSG00000161267.12	ENST00000476764.2	680	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACATTTGGGTCTTGTCTGT	-197555571	False	NA	NA	False	AATAAA	-30	NA	197555676	197554368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197554714_197555341
transcript_105304.known	chr3	-	544	2	FSM	ENSG00000161267.12	ENST00000492681.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCAGGCTGGAGTGCA	NA	False	NA	NA	False	NA	NA	NA	197555956	197546118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197546487_197555780
transcript_105305.known	chr3	-	609	3	FSM	ENSG00000161267.12	ENST00000468710.1	609	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	57.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTTGAATGGCAGGCCG	NA	False	NA	NA	False	AATATA	-13	NA	197555977	197538666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197538953_197546360_197546487_197555780
transcript_105306.known	chr3	-	1552	8	FSM	ENSG00000214135.9	ENST00000418868.6	1555	8	3	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	38.0879754981939	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCTCAGATATTCAGGG	-197623519	True	NA	NA	False	AATAAA	-20	NA	197627906	197614026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197614623_197615563_197615686_197619739_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624198_197627779
transcript_105307.known	chr3	-	770	6	FSM	ENSG00000214135.9	ENST00000454517.1	770	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	56.5352987079754	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAATCTAATTTCTACT	-197623461	True	NA	NA	False	NA	NA	NA	197627848	197619739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197619889_197621703_197621869_197622186_197622331_197623219_197623383_197624111_197624199_197627786
transcript_105312.known	chr3	+	6733	9	FSM	ENSG00000122068.13	ENST00000241502.9	6733	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	24.4792641842029	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACACTGTATCAATTGCTA	197747074	True	NA	5	True	AATAAA	-17	NA	197749882	197787596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197750075_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_105318.known	chr3	+	1758	9	FSM	ENSG00000122068.13	ENST00000424384.2	1758	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	93.2734554951193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACAATGTATTAGAATT	197750374	False	NA	NA	False	NA	NA	NA	197750389	197782380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197750823_197756425_197756558_197768438_197768588_197770131_197770245_197773402_197773500_197774148_197774211_197776926_197777002_197778337_197778465_197781810
transcript_105324.known	chr3	-	416	2	FSM	ENSG00000145016.16	ENST00000472149.1	416	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAAATTAGCCGGGC	-197749295	False	NA	NA	False	AATAAA	-13	NA	197749347	197748108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197748446_197749268
transcript_105325.nnic	chr3	+	2171	15	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-3	-3509	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_14	47.5957145215441	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTTCAGAAGGCTCCC	197783374	True	NA	NA	False	AATAAA	-18	NA	197791231	197855930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197855450
transcript_105333.nnic	chr3	+	959	5	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-3	1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	80.4036690705095	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783374	True	NA	9	True	AATAAA	-15	NA	197791231	197885831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820368_197885496
transcript_105334.nnic	chr3	+	928	5	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-3	1833	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	80.4036690705095	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783374	True	NA	9	True	AATAAA	-15	NA	197791231	197885831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820377_197885536
transcript_105337.nnic	chr3	+	913	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99845	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6799.27121094607	2666	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850344	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197850815_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105338.nnic	chr3	+	1074	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99845	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	6799.27121094607	35536	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850344	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197850976_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105339.nnic	chr3	+	1164	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99845	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6799.27121094607	35662	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850344	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197851066_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105340.nnic	chr3	+	1222	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99845	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6799.27121094607	35670	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850344	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197851124_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105341.nnic	chr3	+	1248	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99845	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6799.27121094607	35673	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850344	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197851150_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105344.nnic	chr3	+	1174	5	NNC	ENSG00000182899.17	novel	564	5	NA	NA	-99836	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6799.27121094607	35643	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	NA	False	NA	48	True	ATTAAA	-18	NA	197850353	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197851085_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105347.nnic	chr3	+	916	4	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-3	1833	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	87.9747438504686	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783374	True	NA	9	True	AATAAA	-15	NA	197791231	197885831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815053_197817175_197817303_197885496
transcript_10535.nnic	chr1	-	553	3	NNC	ENSG00000159445.13	novel	643	2	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	1	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	-151908102	True	NA	NA	False	AATAAA	-24	NA	151909461	151894829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_151895195_151907320_151907407_151909359
transcript_105351.nnic	chr3	+	731	3	NNC	ENSG00000186001.14	novel	2258	19	NA	NA	-3	1833	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	101	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTTTCTGTAGTT	197783374	True	NA	9	True	AATAAA	-15	NA	197791231	197885831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_197791541_197814907_197815016_197885517
transcript_105352.known	chr3	+	7394	22	FSM	ENSG00000186001.14	ENST00000438796.6	7394	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	55.5205830966525	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTGGAGCGTGTTCAT	197783377	True	NA	11	True	AATAAA	-30	NA	197791234	197888436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197791541_197814907_197815053_197817175_197817303_197820324_197820431_197826877_197827015_197829563_197829674_197830769_197830864_197832196_197832318_197835673_197835823_197839320_197839398_197847408_197847461_197847871_197848022_197852560_197852621_197854391_197854446_197858833_197858906_197865422_197865472_197866111_197866220_197870159_197870279_197871324_197871463_197875697_197875776_197880511_197880758_197883540
transcript_105353.known	chr3	-	555	1	FSM	ENSG00000234742.1	ENST00000452862.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	829	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	197850954	197850399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197850400_197851000
transcript_105354.known	chr3	-	2232	12	FSM	ENSG00000114473.14	ENST00000265239.11	2232	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	13.8504408140608	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-197959866	True	NA	-1	True	AATAAA	-24	NA	197959991	197889076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197959528_197959720_197959844
transcript_10536.known	chr1	-	643	2	FSM	ENSG00000159445.13	ENST00000489410.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTATTGTCAAGAATAAGA	NA	False	NA	NA	False	AATAAA	-24	NA	151909637	151894829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151895195_151909359
transcript_10539.known	chr1	-	616	3	FSM	ENSG00000197747.9	ENST00000368809.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	672.5	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGAGACAGAATGTTT	-151992548	False	NA	-15	True	AATAAA	-21	NA	151992578	151982917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151983325_151986098_151986252_151992522
transcript_1054.known	chr1	-	2677	20	FSM	ENSG00000248333.9	ENST00000407249.7	2677	20	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_13	55.6779918923396	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTGTGTTTTCTCCGTGA	-1653001	True	NA	NA	False	ATTAAA	-25	NA	1659012	1635586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1635857_1635936_1636127_1636332_1636482_1636681_1636799_1636896_1637005_1637080_1637203_1637407_1637514_1637761_1637884_1638499_1638591_1640276_1640453_1641047_1641114_1641661_1641821_1641905_1642002_1642346_1642509_1645125_1645263_1649498_1649638_1652438_1652567_1655368_1655485_1657374_1657499_1658913
transcript_10542.known	chr1	-	671	3	FSM	ENSG00000197747.9	ENST00000368811.8	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	1349	junction_1	44.5	10904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGACAGAATGTTTGTT	-151975848	True	NA	-12	True	AATAAA	-24	NA	151993859	151982914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_151983325_151986098_151986252_151993751
transcript_105434.known	chr3	-	3250	2	FSM	ENSG00000114473.14	ENST00000493624.1	3250	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCAT	-197959890	True	NA	NA	False	AAAACA	-14	NA	197960015	197956640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197959720_197959844
transcript_105435.known	chr3	+	553	5	FSM	ENSG00000182899.17	ENST00000448864.6	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	4178	junction_1	5052.48223648535	132986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTTGCTACATGCTTAA	197796428	True	NA	48	True	ATTAAA	-18	NA	197950189	197955851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950300_197950935_197950979_197951158_197951312_197954002_197954148_197955749
transcript_105436.known	chr3	+	442	5	FSM	ENSG00000182899.17	ENST00000429437.5	442	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	5942.74433132539	199885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	197796444	True	NA	14	True	AATAAA	-25	NA	197950205	197955817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950222_197950935_197950979_197951158_197951329_197954002_197954148_197955749
transcript_105437.known	chr3	-	1981	11	FSM	ENSG00000114473.14	ENST00000455191.5	1981	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	10.4899952335547	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTATCGTCACTTTGGTG	-197949269	True	NA	-1	True	AATAAA	-24	NA	197949925	197889076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_197889715_197891445_197891548_197892627_197892760_197912674_197912750_197913880_197914043_197926023_197926106_197932173_197932303_197938547_197938781_197943777_197944052_197945619_197945687_197949838
transcript_105438.known	chr3	+	564	5	FSM	ENSG00000182899.17	ENST00000439255.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	7108.57890158082	2462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAGTGGATTAAAAAA	197950810	False	NA	14	True	AATAAA	-25	NA	197950953	197955817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950979_197951158_197951312_197953487_197953661_197954002_197954148_197955749
transcript_105439.known	chr3	+	579	3	FSM	ENSG00000182899.17	ENST00000496582.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	8323	junction_1	3714.5	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAATAAACAAAAGATT	197796431	True	NA	NA	False	NA	NA	NA	197950192	197951665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_197950222_197950935_197950979_197951158
transcript_105445.nnic	chr3	+	1052	5	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4134	350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5435032565657	35	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTGTCTTTGCTAT	NA	False	NA	9	True	ATTAAA	-19	NA	198157420	198170409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_198157670_198162331_198162446_198167675_198167872_198169784_198169873_198170004
transcript_105449.nnic	chr3	+	798	5	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4203	7253	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.1021407573801	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATCCATGTATTTGT	NA	False	NA	NA	False	ATTAAA	-21	NA	198157489	198177312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_198157670_198167675_198167872_198169784_198169873_198176882_198176932_198177027
transcript_105451.nnic	chr3	+	937	4	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4135	350	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	11.5854314646552	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGGTTGTCTTTGCTAT	NA	False	NA	9	True	ATTAAA	-19	NA	198157421	198170409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_198157670_198167675_198167872_198169784_198169873_198170004
transcript_105452.nnic	chr3	+	1952	4	NNC	ENSG00000236438.7	novel	1141	4	NA	NA	4135	1874	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_3	14.2672897060218	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGGTCTGTGCTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	198157421	198171933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_198157670_198167675_198167872_198169784_198169873_198170513
transcript_105457.nnic	chr4	+	1108	4	NNC	ENSG00000272602.6	novel	1072	4	NA	NA	-2	-8102	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	35.8360464089194	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGAAGTCCTGCTTTAT	49611	True	NA	NA	False	AATGAA	-23	NA	53283	79419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_53492_59429_59557_60057_60154_78742
transcript_105458.known	chr4	+	2872	4	FSM	ENSG00000272602.6	ENST00000610261.6	2872	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	5.24933858267454	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGGAGTTAAATATGTAAA	49648	True	NA	NA	False	AATAAA	-23	NA	53320	88208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_59429_59557_60057_60154_85730
transcript_105459.known	chr4	+	747	3	FSM	ENSG00000272602.6	ENST00000502981.2	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAATACGTAAGGTGAG	49656	True	NA	NA	False	NA	NA	NA	53328	60514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_59429_59557_60057
transcript_10546.known	chr1	-	563	3	FSM	ENSG00000163191.6	ENST00000271638.3	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	4544	junction_2	134.5	20281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGAGTTGGTGAATTTG	-152014754	True	NA	-2	True	AATAAA	-27	NA	152037004	152032505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_152032824_152033647_152033801_152036912
transcript_105460.known	chr4	+	1999	2	FSM	ENSG00000272602.6	ENST00000608255.2	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGTATTATTTTTCTT	49613	True	NA	NA	False	AATAAA	-23	NA	53285	87523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53492_85730
transcript_105464.nnic	chr4	+	1181	5	NNC	ENSG00000250312.8	novel	1199	5	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	14.3003496460751	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCTGTCTTGGGTATC	120910	True	NA	NA	False	ATTAAA	-18	NA	124489	202303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_124674_126847_126922_127007_127128_201080_201212_201631
transcript_105469.nnic	chr4	+	979	4	NNC	ENSG00000250312.8	novel	3647	4	NA	NA	-70	-27990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.1070255914995	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCAAATGAAAATTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	124430	134711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_124674_126847_126922_127007_127128_134169
transcript_10547.known	chr1	+	619	2	FSM	ENSG00000169469.9	ENST00000307098.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTGTGTGTCATTG	153031192	True	NA	NA	False	ATTAAA	-17	NA	153031202	153032900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153031248_153032326
transcript_105474.nnic	chr4	+	643	4	NNC	ENSG00000250312.8	novel	3647	4	NA	NA	-70	8411	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	15.1070255914995	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATTCTTGGAAATGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	124430	210714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_124674_126847_126922_127007_127128_210508
transcript_105479.nnic	chr4	+	1567	4	NNC	ENSG00000250312.8	novel	2772	4	NA	NA	-35	-27990	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	16.8193010820572	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTGCAAATGAAAATTGT	120886	True	NA	NA	False	ATTAAA	-16	NA	124465	134711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_125297_126847_126922_127007_127128_134169
transcript_10548.known	chr1	-	677	2	FSM	ENSG00000241794.2	ENST00000392653.3	677	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGAATGGATCTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	153057512	153056119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153056755_153057470
transcript_10549.known	chr1	+	573	3	FSM	ENSG00000163220.11	ENST00000368738.4	573	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGTGCTCTGTGTGCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	153357853	153361023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153357882_153358268_153358434_153360643
transcript_105490.known	chr4	+	1199	5	FSM	ENSG00000250312.8	ENST00000642529.1	1199	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.46410161513775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACCCTGTCTTGGGTATC	120921	True	NA	NA	False	ATTAAA	-18	NA	124500	202303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_124674_130787_130915_131409_131506_201080_201212_201631
transcript_105494.nnic	chr4	+	1006	4	NNC	ENSG00000198155.5	novel	2598	2	NA	NA	3	-8396	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTCACCCTGTGGTAC	209621	True	NA	NA	False	ATTAAA	-22	NA	212612	246445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_212782_242142_242312_242750_242792_245818
transcript_105497.known	chr4	+	2598	2	FSM	ENSG00000198155.5	ENST00000356347.3	2598	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGATGCAAGTTCACA	209618	True	NA	92	True	TATAAA	-15	NA	212609	255985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_212782_253559
transcript_1055.known	chr1	+	1309	7	FSM	ENSG00000189409.14	ENST00000378675.7	1309	7	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_3	21.2733531808118	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCTCGCTCATTCTTG	1631017	True	NA	NA	False	GATAAA	-16	NA	1632178	1634654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1632375_1632782_1632914_1632980_1633356_1633747_1633913_1633988_1634100_1634201_1634329_1634450
transcript_105501.nnic	chr4	-	1010	5	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-41	14276	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	49.7562810105418	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTCTTTAAATTCAGAATG	-299912	True	NA	-14	True	ATTAAA	-26	NA	305515	256398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_256879_266163_266263_295437_295534_296028_296156_305307
transcript_105503.nnic	chr4	-	694	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-41	51613	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	45.2621990922521	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGATTTTAAGATGTGGAA	-299912	True	NA	NA	False	AATAAA	-24	NA	305515	219061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_219325_295437_295534_296028_296156_305307
transcript_105504.nnic	chr4	-	706	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-41	37665	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_1	45.2621990922521	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAGAATTTATTTGATGA	-299912	True	NA	-1	True	AATAAA	-16	NA	305515	233009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_233285_295437_295534_296028_296156_305307
transcript_105506.nnic	chr4	-	1474	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-41	23664	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	17.4610678049451	257	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTATACTCTTTCCCT	-299912	True	NA	-8	True	TTTAAA	-6	NA	305515	247010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_105507.nnic	chr4	-	696	4	NNC	ENSG00000186777.12	novel	2179	3	NA	NA	-41	22886	at_least_one_novel_splicesite	FALSE	canonical	3	67	junction_1	17.4610678049451	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCTTTAGTCTCTTA	-299912	True	NA	NA	False	NA	NA	NA	305515	247788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_248054_295437_295534_296028_296156_305307
transcript_10551.known	chr1	-	673	4	FSM	ENSG00000197956.10	ENST00000368720.6	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	202.703943940144	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534313	False	1931	-8	True	AATAAA	-20	NA	153536244	153534598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153534831_153535201_153535361_153535788_153535934_153536107
transcript_105512.known	chr4	-	1132	2	FSM	ENSG00000286705.1	ENST00000653800.1	1132	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCGTTCCATTTTGC	-337403	False	NA	NA	False	AATAAA	-25	NA	337433	307334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_308232_337198
transcript_105515.known	chr4	+	720	4	FSM	ENSG00000131127.14	ENST00000503699.1	720	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	26.59991645768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCATTTTATTTTTCT	337460	True	NA	NA	False	NA	NA	NA	337832	358550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_358207
transcript_105517.known	chr4	+	12601	4	FSM	ENSG00000131127.14	ENST00000240499.8	12601	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	9.0921211313239	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGATGTCTGTGTGCC	337441	True	NA	17	True	AATAAA	-20	NA	337813	384868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_372663
transcript_10552.known	chr1	-	673	3	FSM	ENSG00000197956.10	ENST00000496817.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	212.5	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534284	False	NA	-8	True	AATAAA	-20	NA	153536215	153534598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153534831_153535201_153535376_153535948
transcript_105527.known	chr4	+	2146	4	FSM	ENSG00000131127.14	ENST00000505939.5	2146	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.4722086720835	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTCTCTGATGTCTGTG	337461	True	NA	13	True	AATAAA	-16	NA	337833	384864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_383094
transcript_105528.nnic	chr4	+	691	4	NNC	ENSG00000131127.14	novel	12601	4	NA	NA	-31	-10797	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	28.4722086720835	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAACCTTTTGCCTATTTT	337631	False	NA	NA	False	NA	NA	NA	337782	347753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_337987_343781_343909_344334_344525_347583
transcript_10553.nnic	chr1	-	759	3	NNC	ENSG00000197956.10	novel	673	4	NA	NA	-240	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	206	330	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGCGTCCTGGCTTCCG	-153534553	False	NA	-8	True	AATAAA	-20	NA	153536484	153534598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_153534831_153535201_153535361_153536116
transcript_105531.known	chr4	-	142	1	FSM	ENSG00000250321.1	ENST00000506193.1	142	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	192	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTTTCTGTAGTG	NA	False	NA	NA	False	NA	NA	NA	342962	342820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_342800_343000
transcript_105532.known	chr4	+	1611	5	FSM	ENSG00000131127.14	ENST00000512994.5	1611	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	24.6728595829507	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCCTGTTTTTCATT	337447	True	NA	15	True	AATAAA	-16	NA	337819	383971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_337987_343781_343909_344334_344431_372663_373008_383094
transcript_10554.known	chr1	+	531	2	FSM	ENSG00000238279.2	ENST00000420695.2	709	2	164	14	164	-14	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCACCTGGCACCTCTC	153533575	False	NA	NA	False	NA	NA	NA	153533602	153535115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153533922_153534903
transcript_105541.known	chr4	-	4673	3	FSM	ENSG00000182903.16	ENST00000511833.3	4673	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	122	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCGTGAATGAAG	-498761	True	NA	-4	True	AATAAA	-20	NA	499156	439987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_444433_472574_472702_499055
transcript_10555.known	chr1	-	566	4	FSM	ENSG00000196154.12	ENST00000354332.8	566	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	94.5386458309804	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543871	True	NA	1	True	AATAAA	-25	NA	153545802	153543612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653_153544810_153545469_153545519_153545752
transcript_105550.known	chr4	-	1815	3	FSM	ENSG00000251595.7	ENST00000451020.6	1815	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	144	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAATAAAAATGAGTTTTT	-465696	True	NA	NA	False	AATAAA	-21	NA	474129	425434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_426974_472574_472702_473980
transcript_105551.known	chr4	-	664	3	FSM	ENSG00000182903.16	ENST00000505900.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	25.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATTCATGCTGGAGAGAA	-465734	True	NA	NA	False	CATAAA	-1	NA	474167	444082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_444433_472574_472702_473980
transcript_105553.known	chr4	+	3203	13	FSM	ENSG00000174227.16	ENST00000310340.9	3203	13	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	38.9025670389786	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGTATCATATTTTCC	496013	True	NA	NA	False	AATAAA	-17	NA	499220	539529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521250_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_105554.known	chr4	+	3909	13	FSM	ENSG00000174227.16	ENST00000453061.7	3909	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	30.2474746420626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTTTTACATTTTTACA	496002	True	NA	12	True	AATAAA	-20	NA	499209	540200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_499490_500395_500602_505717_505928_507404_507594_508828_508971_515972_516186_521055_521274_521659_521942_523458_523914_527038_527231_530435_530746_533817_533982_539152
transcript_10556.known	chr1	-	573	3	FSM	ENSG00000196154.12	ENST00000368715.5	573	3	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	93	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543132	False	1931	1	True	AATAAA	-25	NA	153545063	153543612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653_153544810_153544957
transcript_105584.nic	chr4	+	1197	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10517	-353	-26	-196	3prime_fragment	FALSE	canonical	0	0	junction_5	20.317616876877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATCCATTTTTGGAT	662968	True	NA	19	True	AATAAA	-13	NA	663696	670586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_105585.nic	chr4	+	1393	7	ISM	ENSG00000133256.13	ENST00000429163.6	2120	20	10517	-549	-26	0	3prime_fragment	FALSE	canonical	0	0	junction_5	20.317616876877	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCATTATCTGTGGTA	662968	True	NA	10	True	AATAAA	-16	NA	663696	670782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_667855_668007_670045
transcript_105586.known	chr4	+	580	6	FSM	ENSG00000133256.13	ENST00000471824.6	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.1630322835121	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGGAAGCCCAAGAAAATG	663041	True	NA	NA	False	NA	NA	NA	663769	670193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_663871_664113_664222_664880_664945_665254_665330_666530_666615_670045
transcript_105589.nnic	chr4	-	941	4	Genic_Genomic	ENSG00000272927.1	novel	737	1	NA	NA	-2307	-340	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCCTGCTGCACCTGT	-626057	False	NA	NA	False	AGTAAA	-15	NA	664252	661548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_-_662149_662538_662605_663201_663310_664085
transcript_10559.known	chr1	-	513	3	FSM	ENSG00000196154.12	ENST00000368716.9	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	19.5	1929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGATGGTTTGAGAGA	-153543875	True	NA	-7	True	AATAAA	-17	NA	153545806	153543620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653_153544810_153545752
transcript_105592.known	chr4	-	411	1	FSM	ENSG00000242686.4	ENST00000598370.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTTGGTATACAATACAG	NA	False	NA	45	True	NA	NA	NA	653260	652849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_652800_653300
transcript_1056.known	chr1	-	6434	10	FSM	ENSG00000189339.12	ENST00000617444.5	6434	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	65.3669603559232	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTGTTTTCTTCCTTG	-1692466	True	NA	-9	True	AATAAA	-14	NA	1692795	1661477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1690975_1691394_1692448
transcript_10560.known	chr1	-	742	3	FSM	ENSG00000188015.10	ENST00000368713.8	742	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTTTTGTTTGGTTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	153549258	153547328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153547847_153548344_153548491_153549180
transcript_105603.known	chr4	+	584	7	FSM	ENSG00000215375.6	ENST00000505477.5	584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.7845640224301	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGACCCTGCCTGCGAGT	673925	False	NA	17	True	AATAAA	-9	NA	673940	682022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_673978_678657_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_10561.known	chr1	-	755	2	FSM	ENSG00000196154.12	ENST00000481009.1	755	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGAGAGACTCTGGGG	-153543166	False	1931	1	True	AATAAA	-25	NA	153545097	153543612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153543924_153544653
transcript_105612.known	chr4	-	300	3	FSM	ENSG00000169020.10	ENST00000505852.1	300	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	7727.5	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-636135	True	NA	-31	True	AATAAA	-19	NA	674330	672437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_674211
transcript_105616.known	chr4	-	303	4	FSM	ENSG00000169020.10	ENST00000304312.5	303	4	0	0	0	0	multi-exon	FALSE	canonical	3	12319	junction_3	1462.88330209746	83368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-636081	True	NA	-29	True	AATAAA	-21	NA	674276	672435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_673911_673967_674211
transcript_105617.known	chr4	-	393	3	FSM	ENSG00000169020.10	ENST00000515202.5	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	15251	junction_2	159	3818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCCTCATTTGCTG	-674109	False	NA	-29	True	AATAAA	-21	NA	674121	672435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_673911
transcript_105618.known	chr4	-	496	3	FSM	ENSG00000169020.10	ENST00000506525.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7778	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGGCTCCTCATTTGC	-673809	False	97	-31	True	AATAAA	-19	NA	673821	672437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302_673402_673506
transcript_105619.known	chr4	+	2956	8	FSM	ENSG00000215375.6	ENST00000506838.5	2956	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	15.4536832674483	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGCCTGCGAGTCTGCC	673278	True	NA	22	True	AATAAA	-14	NA	673579	682027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_675855_676072_676210_678665_678766_678957_679034_679913_680019_680508_680588_681091_681141_681892
transcript_105620.known	chr4	+	531	2	FSM	ENSG00000215375.6	ENST00000503612.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCTGCGAGTCTGCCG	679958	False	NA	23	True	AATAAA	-15	NA	680745	682028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_681141_681892
transcript_105621.known	chr4	-	247	2	FSM	ENSG00000169020.10	ENST00000515116.1	247	2	0	0	0	0	multi-exon	FALSE	canonical	3	15569	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGACCCACTCTTTGGAC	-673511	False	NA	-87	True	ATTAAA	-11	NA	673523	672493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_672520_673302
transcript_105623.known	chr4	+	1652	11	FSM	ENSG00000185619.18	ENST00000470161.6	1652	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.3339547973503	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTCCATTAACATTAT	703339	True	NA	23	True	TATAAA	-26	NA	705783	766608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_705971_730629_730669_730951_731111_733671_733790_734930_735028_737465_737522_743473_743585_744599_744689_761278_761417_764983_765065_766031
transcript_105628.nic	chr4	+	1170	5	ISM	ENSG00000185619.18	ENST00000440452.5	3609	13	-60	33390	8	-5	intron_retention	FALSE	canonical	3	28	junction_3	43.3265219005634	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTTTGACTTTAACGT	703438	True	NA	4	True	AATAAA	-17	NA	705882	734474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_705971_730629_730669_730969_731111_732399_732499_733671
transcript_105632.known	chr4	+	1175	4	FSM	ENSG00000185619.18	ENST00000400151.6	1175	4	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_3	7.93025150224688	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGACTTTAACGTTAATC	703339	True	NA	9	True	AATAAA	-22	NA	705783	734479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_705971_730629_730669_730969_731111_733671
transcript_105643.nnic	chr4	-	622	3	FSM	ENSG00000249592.7	ENST00000691800.1	619	3	0	-3	0	3	multi-exon	FALSE	canonical	3	8	junction_1	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGCCTTATTCATAATC	-780736	True	NA	0	True	CATAAA	-20	NA	781866	777051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_777421_780530_780689_781771
transcript_105646.known	chr4	-	531	2	FSM	ENSG00000249592.7	ENST00000503571.5	531	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCTGCTGGTGGCCCAG	-780719	True	NA	NA	False	NA	NA	NA	781849	762386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_762840_781771
transcript_105647.known	chr4	-	534	2	FSM	ENSG00000249592.7	ENST00000507446.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAAAACGCCCTTCCAG	-780700	True	NA	NA	False	NA	NA	NA	781830	767140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_767616_781771
transcript_105651.known	chr4	-	4461	28	FSM	ENSG00000178950.18	ENST00000314167.9	4461	28	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_21	37.634295423774	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGTCTCCAGTGTGG	-926830	True	NA	-3	True	ATTAAA	-15	NA	932316	849276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_849775_849891_850069_850935_851085_851749_851975_859605_859723_865121_865245_866363_866535_866955_867433_868538_868686_870710_870905_876529_876610_877089_877208_877614_877810_881906_882041_882696_882820_883314_883464_884036_884087_888846_888971_890531_890623_893376_893490_893873_894010_896459_896550_898032_898159_904636_904780_911672_911788_912734_912795_913606_913669_932042
transcript_105652.known	chr4	+	1787	11	FSM	ENSG00000127419.17	ENST00000264771.9	1787	11	0	0	0	0	multi-exon	TRUE	canonical	3	25	junction_3	10.6564534438058	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCTCCACTTTTTGCGG	931481	True	NA	22	True	NA	NA	NA	932459	958656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_932541_947708_947893_948115_948155_950420_950519_951206_951259_951681_951718_952366_952451_953189_953355_955404_955484_955754_955891_957823
transcript_105658.known	chr4	-	2335	10	FSM	ENSG00000178222.13	ENST00000382968.9	2335	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.16595429884644	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCATTTTGTGGCTTG	-1113445	True	NA	NA	False	GATAAA	-20	NA	1113562	1071477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1073141_1073598_1073663_1079642_1079689_1081418_1081468_1081566_1081620_1085895_1085955_1090781_1090839_1096764_1096840_1108342_1108405_1113355
transcript_10566.known	chr1	-	977	3	FSM	ENSG00000196754.13	ENST00000368708.9	977	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCATCCACCATCACTATC	-153565817	False	NA	NA	False	AATAAA	-19	NA	153565844	153561107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153561592_153563733_153563888_153565505
transcript_105660.known	chr4	-	528	3	FSM	ENSG00000178222.13	ENST00000514024.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGAGCATACATGTGATAT	NA	False	NA	-9	True	AATAAA	-20	NA	1058427	1056249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1056504_1056837_1057005_1058320
transcript_105661.known	chr4	-	1579	6	FSM	ENSG00000159674.12	ENST00000290902.10	1579	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	3.26190128606002	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGGCTGTCCCCACA	-1172300	False	283	-4	True	AATAAA	-23	NA	1172583	1166931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1167657_1170401_1170577_1170998_1171191_1171262_1171487_1171851_1172075_1172543
transcript_105662.nic	chr4	-	2350	10	NIC	ENSG00000159692.16	novel	2488	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	143	junction_9	337.169408275044	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGTGCCCAGCATCTAT	-1248688	False	NA	-18	True	AATAAA	-15	NA	1248740	1211447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_1212424_1212912_1213031_1213477_1213606_1214342_1214474_1215990_1216206_1225359_1225567_1228198_1228344_1238182_1238338_1241324_1241520_1248660
transcript_105667.known	chr4	+	2182	9	FSM	ENSG00000090316.16	ENST00000303400.9	2182	9	0	0	0	0	multi-exon	FALSE	canonical	3	678	junction_6	40.051334247438	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTGTGAGCCGAGGCT	1281835	True	NA	37	True	AATAAA	-45	NA	1289890	1340137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_105669.known	chr4	+	1607	9	FSM	ENSG00000090316.16	ENST00000510794.5	1607	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	237.436175634632	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCATTTGATGCTTCTGAA	NA	False	NA	NA	False	AAAACA	-30	NA	1309442	1339384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1309713_1311978_1312162_1315396_1315601_1322380_1322504_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_10567.known	chr1	-	457	3	FSM	ENSG00000196754.13	ENST00000368709.6	457	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAATTGCTCAGTGA	-153566728	False	NA	-3	True	AATAAA	-20	NA	153566755	153561342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153561592_153563733_153563888_153566701
transcript_105671.known	chr4	+	2058	8	FSM	ENSG00000090316.16	ENST00000264750.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	249.422762164391	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCGTGTGAGCCGAGGC	1281835	True	NA	36	True	AATAAA	-44	NA	1289890	1340136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1327626_1327704_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_105674.known	chr4	+	1001	7	FSM	ENSG00000090316.16	ENST00000509531.5	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	268.913658179639	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGCGCACGCCTCGGGG	1281858	True	NA	NA	False	NA	NA	NA	1289913	1339179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1289983_1311978_1312162_1315396_1315601_1332756_1332866_1336860_1336995_1338421_1338618_1339073
transcript_105682.known	chr4	-	579	2	FSM	ENSG00000244459.3	ENST00000466692.2	853	2	274	0	211	0	multi-exon	FALSE	canonical	3	6	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGGCTCTGGTGTGCAGT	-1580083	False	170	-7	True	NA	NA	NA	1580253	1574061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1574545_1580157
transcript_105683.known	chr4	-	1810	8	FSM	ENSG00000163950.13	ENST00000489418.6	1810	8	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_7	19.0712948095898	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCTGCCTTTCTTGTG	-1703859	True	NA	2	True	NA	NA	NA	1712319	1692730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1693714_1694773_1694841_1696201_1696352_1699563_1699702_1700010_1700071_1703595_1703701_1711873_1711991_1712129
transcript_105684.known	chr4	+	2799	16	FSM	ENSG00000013810.21	ENST00000313288.9	2799	16	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	106.258092502276	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAAGCCGCTCTGGTCT	1707792	True	NA	39	True	AATAAA	-20	NA	1721520	1745171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1727707_1728788_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_105686.known	chr4	+	1732	15	FSM	ENSG00000013810.21	ENST00000612220.5	1732	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	249.128245393936	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAAACACTGAAGCCGC	1707771	True	NA	31	True	AATAAA	-12	NA	1721499	1745163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_1721644_1723420_1723584_1723727_1723871_1730886_1730963_1731171_1731302_1735272_1735326_1735730_1735835_1737240_1737329_1737597_1737703_1739701_1739779_1739958_1740003_1740825_1740987_1744517_1744625_1744711_1744833_1744947
transcript_105689.known	chr4	-	5371	14	FSM	ENSG00000168924.15	ENST00000302787.3	5371	14	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	29.7020709337157	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGCAGAGTAATAATATT	-1852013	True	NA	-3	True	ATTAAA	-24	NA	1856156	1811478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1814574_1815663_1815803_1816726_1816915_1819337_1819473_1822180_1822313_1822987_1823132_1823643_1823776_1825563_1825684_1832743_1832948_1834844_1834983_1836428_1836573_1841346_1841798_1849148_1849210_1855868
transcript_105694.known	chr4	-	2198	11	FSM	ENSG00000185049.16	ENST00000382882.9	2198	11	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_6	31.8785194135487	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCATAGCTGTGTTTGG	-2002897	True	NA	-15	True	ATTAAA	-21	NA	2008974	1982722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_1983504_1983595_1983696_1983847_1984114_1984807_1984920_1985775_1985865_1986113_1986184_1986271_1986403_1987917_1988008_1989707_1989870_1991543_1991716_2008749
transcript_1057.known	chr1	-	5948	9	FSM	ENSG00000189339.12	ENST00000611123.1	5948	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_8	21.1538264860048	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTTTGTTTTCTTCCTT	-1692697	False	NA	-10	True	AATAAA	-13	NA	1692728	1661478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1666020_1668326_1668473_1669663_1669737_1670097_1670152_1671508_1671630_1675462_1675591_1676063_1676200_1676377_1676847_1692448
transcript_10570.nnic	chr1	-	556	3	NNC	ENSG00000196754.13	novel	457	3	NA	NA	-778	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTAATTGCTCAGTGA	-153568641	True	NA	-3	True	AATAAA	-20	NA	153568668	153561342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_153561592_153563733_153563888_153568515
transcript_105715.known	chr4	-	792	4	FSM	ENSG00000185049.16	ENST00000458616.1	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCATATGCAGAACATG	-2002865	True	NA	NA	False	TTTAAA	-17	NA	2008942	2003837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2004151_2006997_2007200_2007962_2008047_2008749
transcript_105716.nic	chr4	-	748	3	NIC	ENSG00000185049.16	novel	792	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGCATATGCAGAACATG	-2002905	True	NA	NA	False	TTTAAA	-17	NA	2008982	2003837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_2004151_2006997_2007200_2008749
transcript_105718.nic	chr4	-	523	2	ISM	ENSG00000185049.16	ENST00000443203.5	553	3	-10	15322	-8	-3072	5prime_fragment	FALSE	canonical	2	6	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTGTAAGAGTGTCTT	-2002905	True	NA	-9	True	TTTAAA	-16	NA	2008982	2006909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_2007200_2008749
transcript_10572.nnic	chr1	-	1238	4	NNC	ENSG00000188643.11	novel	1146	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	78.6680790833656	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153609173	False	1024	-6	True	ATTAAA	-21	NA	153609366	153606885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_153607693_153607998_153608178_153608898_153608962_153609177
transcript_105723.known	chr4	-	5879	6	FSM	ENSG00000214367.9	ENST00000443786.3	5879	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	53.1977443130815	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240366	True	NA	NA	False	NA	NA	NA	2242121	2228348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2241519_2241791_2242050
transcript_105729.known	chr4	-	5620	5	FSM	ENSG00000214367.9	ENST00000243706.8	5620	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	64.9206246119059	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAGCAGTGATATGCTC	-2240378	True	NA	NA	False	NA	NA	NA	2242133	2228348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2232161_2236227_2236457_2238603_2239044_2240037_2241094_2242050
transcript_105732.known	chr4	-	580	3	FSM	ENSG00000214367.9	ENST00000514395.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	56	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATGAATCGTTTCTG	-2240366	True	NA	NA	False	NA	NA	NA	2242121	2240846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2241094_2241519_2241782_2242050
transcript_105733.known	chr4	-	3871	6	FSM	ENSG00000123933.17	ENST00000337190.7	3871	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	12.8436754864019	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTGGCTCCGGCTCTT	-2260067	True	NA	-3	True	TATAAA	-20	NA	2262109	2247431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2250702_2251083_2251247_2252407_2252523_2257981_2258012_2261724_2261825_2261916
transcript_105739.known	chr4	+	2921	8	FSM	ENSG00000063978.16	ENST00000314289.13	2921	8	0	0	0	0	multi-exon	FALSE	canonical	1	251	junction_4	200.045709062418	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTTTACACATTCATTT	2461613	True	NA	19	True	AATAAA	-20	NA	2469105	2515857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_105742.known	chr4	+	855	8	FSM	ENSG00000063978.16	ENST00000502316.5	855	8	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	280.496207548301	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGAAGTATTCAGAGC	2461604	True	NA	NA	False	AAAAAG	-29	NA	2469096	2513811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2469230_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2512437_2512598_2513082_2513132_2513669
transcript_105745.known	chr4	+	1373	7	FSM	ENSG00000063978.16	ENST00000511859.5	1373	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	293.966787617619	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGCTTAATGTTGCCTGT	2461647	True	NA	NA	False	NA	NA	NA	2469139	2514503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2513082_2513132_2513669
transcript_105746.known	chr4	+	2796	7	FSM	ENSG00000063978.16	ENST00000541204.5	2796	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	293.966787617619	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATCTTTTACACATTCA	NA	False	NA	16	True	AATAAA	-17	NA	2469067	2515854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2469259_2490336_2490503_2497006_2497122_2500658_2500739_2511955_2511966_2513082_2513132_2513669
transcript_105755.nnic	chr4	-	844	2	Antisense	novelGene_ENSG00000063978.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGTATTTGTGTTTTTT	-2468684	True	NA	1	True	GATAAA	-21	NA	2468941	2467718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_2468021_2468399
transcript_105757.nic	chr4	+	842	2	ISM	ENSG00000125386.16	ENST00000324666.9	4846	20	90622	0	19780	0	3prime_fragment	FALSE	canonical	3	92	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGAGACCTCGGCTGC	NA	False	NA	13	True	ATTAAA	-39	NA	2716053	2732565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_2716105_2731774
transcript_10576.known	chr1	-	956	3	FSM	ENSG00000188643.11	ENST00000368705.2	956	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	80	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTCCCTCCCTGGGGG	-153609151	False	1024	NA	False	NA	NA	NA	153609344	153607361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153607693_153607998_153608178_153608898
transcript_105760.known	chr4	-	2006	6	FSM	ENSG00000168884.15	ENST00000510267.5	2006	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	125.164531717256	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2750811	True	NA	6	True	AATAAA	-34	NA	2756331	2741647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2755948
transcript_105762.known	chr4	-	1946	6	FSM	ENSG00000168884.15	ENST00000315423.12	1946	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	31.7679083352996	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGAAGCTGGGGTGCAG	-2750816	True	NA	6	True	AATAAA	-34	NA	2756336	2741647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2742521_2744386_2744507_2744696_2744946_2745445_2745536_2747654_2747946_2756013
transcript_105766.known	chr4	+	9006	13	FSM	ENSG00000087266.17	ENST00000503393.8	9006	13	0	0	0	0	multi-exon	TRUE	canonical	1	20	junction_1	28.3091808822195	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGTCTCACTTGTGTT	2792332	True	NA	12	True	ATTAAA	-23	NA	2793084	2841096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2793139_2820613_2820754_2822934_2823038_2824612_2824731_2825125_2825197_2827229_2827319_2827605_2827675_2829492_2830148_2831570_2831680_2831922_2831979_2832330_2832413_2832989_2833050_2833696
transcript_105769.known	chr4	+	3107	16	FSM	ENSG00000087274.19	ENST00000513328.6	3107	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_14	265.654110953824	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTTGCTTTCTTCTTT	2835559	True	NA	NA	False	NA	NA	NA	2843972	2929307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2926638_2926676_2928170
transcript_105772.nic	chr4	+	3876	15	NIC	ENSG00000087274.19	novel	4140	16	NA	NA	-23	0	intron_retention	FALSE	canonical	3	597	junction_14	104.515622306536	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCTTGTCTAAATCTGGG	2835508	True	NA	13	True	AATAAA	-14	NA	2843921	2930062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905016_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_105773.known	chr4	+	4045	15	FSM	ENSG00000087274.19	ENST00000264758.11	4045	15	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_10	226.659514943198	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGGGAAGCAGTTTTA	2835443	True	NA	24	True	AATAAA	-25	NA	2843856	2930073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895_2876111_2881897_2882061_2884514_2884667_2894012_2894094_2894581_2894732_2898183_2898328_2898432_2898532_2899258_2899436_2904763_2905109_2907742_2907845_2908514_2908605_2914883_2915041_2926013_2926113_2928170
transcript_10578.known	chr1	-	1172	3	FSM	ENSG00000188643.11	ENST00000368706.9	1172	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	28	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153612113	True	NA	-6	True	ATTAAA	-21	NA	153613137	153606885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153607693_153607998_153608178_153612951
transcript_105780.known	chr4	+	546	2	FSM	ENSG00000087274.19	ENST00000540541.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATACCTAGCTTAGGCTGG	2835575	True	NA	NA	False	ATTAAA	-2	NA	2843988	2876405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_2844025_2875895
transcript_105785.known	chr4	-	1717	13	FSM	ENSG00000109736.15	ENST00000355443.9	1717	13	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_12	122.397122333638	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAAGTGCCTTTCGCCAT	-2927342	True	NA	-9	True	AATAAA	-17	NA	2934825	2930566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_105786.known	chr4	-	1776	11	FSM	ENSG00000109736.15	ENST00000514800.5	1776	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_8	88.6665664159834	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCTTTCGCCATATATAG	-2926464	False	NA	-3	True	AATAAA	-23	NA	2933947	2930560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752
transcript_105787.known	chr4	-	1573	12	FSM	ENSG00000109736.15	ENST00000507555.1	1573	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	254.784854954233	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCAGGTTTCTGATGAT	-2927351	True	NA	-7	True	TTTAAA	-4	NA	2934834	2930610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931824_2931937_2932044_2932154_2932350_2932513_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_105788.known	chr4	-	1589	13	FSM	ENSG00000109736.15	ENST00000503596.5	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	234.762335494147	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTTTGTTTTATACC	-2927333	True	NA	21	True	AATAAA	-1	NA	2934816	2930582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2930954_2931060_2931151_2931226_2931275_2931374_2931466_2931554_2931664_2931824_2931937_2932044_2932154_2932350_2932410_2932599_2932759_2933105_2933210_2933566_2933664_2933752_2933945_2934768
transcript_105791.known	chr4	-	3556	18	FSM	ENSG00000087269.16	ENST00000416614.7	3556	18	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_11	10.8222505638354	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2956999	True	NA	-20	True	TATAAA	-6	NA	2963406	2937935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2938931_2939187_2939344_2939526_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_105792.known	chr4	-	2535	17	FSM	ENSG00000087269.16	ENST00000398071.4	2535	17	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	35.7088924499206	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	-2956926	True	NA	-14	True	AATAGA	-18	NA	2963333	2938112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_2938328_2939538_2939646_2941581_2941730_2942191_2942352_2944072_2944227_2945127_2945230_2946411_2946548_2947525_2947612_2948277_2948409_2949933_2950214_2951113_2951246_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_105797.nnic	chr4	-	1346	7	NIC	ENSG00000087269.16	novel	2723	17	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.1922102461604	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTTTGCAGATATTTTAG	-2956996	True	NA	-20	True	TATAAA	-6	NA	2963403	2937935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_2938328_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_105798.nnic	chr4	-	1161	7	NIC	ENSG00000087269.16	novel	2535	17	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	58.1922102461604	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGGGATCGGGAATGGT	-2956988	True	NA	-14	True	AATAGA	-18	NA	2963395	2938112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_2938328_2952274_2952398_2953510_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_10580.known	chr1	-	1146	3	FSM	ENSG00000188643.11	ENST00000368704.5	1146	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	73	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTTATGCTTTGGTGGTC	-153609144	False	1024	-6	True	ATTAAA	-21	NA	153609337	153606885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153607693_153607998_153608178_153609177
transcript_105802.nic	chr4	-	828	5	ISM	ENSG00000087269.16	ENST00000398071.4	2535	17	-73	15404	0	-15404	5prime_fragment	FALSE	canonical	3	132	junction_3	11.1214882097676	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGGTGGGAGCCAAGTA	-2956999	True	NA	NA	False	AAAAAG	-7	NA	2963406	2953516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_2953646_2954423_2954564_2956669_2956812_2957605_2957741_2963124
transcript_105806.known	chr4	-	10446	8	FSM	ENSG00000163956.13	ENST00000650182.1	10446	8	0	0	0	0	multi-exon	TRUE	canonical	3	759	junction_5	25.3964484099004	972	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTCTTCTTTGATCCAT	-3526726	True	NA	-2	True	NA	NA	NA	3532422	3503611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_3513037_3514751_3514929_3516115_3516199_3518033_3518193_3518870_3518992_3520071_3520194_3524906_3525052_3532208
transcript_10581.known	chr1	-	1218	5	FSM	ENSG00000189334.9	ENST00000368702.5	1218	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.04152298679729	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153616932	False	NA	3	True	AATAAA	-21	NA	153616986	153614254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616294_153616356_153616852
transcript_105815.nnic	chr4	+	785	5	NNC	ENSG00000251271.3	novel	768	8	NA	NA	3001	131970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.44948974278318	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGTTTAAGACATGTAG	3938437	False	NA	NA	False	ATTAAA	-18	NA	3938447	4074489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_3938657_3940194_3940312_3941317_3941394_4042060_4042150_4074195
transcript_10582.known	chr1	-	1080	4	FSM	ENSG00000189334.9	ENST00000368701.5	1080	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.84754619472471	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153616096	False	NA	3	True	AATAAA	-21	NA	153616289	153614254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828_153615937_153616232
transcript_10583.known	chr1	-	1025	3	FSM	ENSG00000189334.9	ENST00000476873.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	0.5	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGTCTTGACTGGACA	-153615745	False	NA	3	True	AATAAA	-21	NA	153615938	153614254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153615023_153615234_153615382_153615828
transcript_105837.nnic	chr4	+	636	3	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	23	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	3927590	3933044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_3927695_3927845_3927996_3932662
transcript_105847.nnic	chr4	-	875	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5545	-6196	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1.5	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCCGGGCACAGTGG	-3929760	False	NA	NA	False	AATAAA	-16	NA	3929819	3921382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_3921783_3924070_3924268_3929541
transcript_105848.nnic	chr4	-	952	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5845	-6196	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGCCGGGCACAGTGG	-3930060	False	NA	NA	False	AATAAA	-16	NA	3930119	3921382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_3921783_3924070_3924268_3929764
transcript_105854.nnic	chr4	-	793	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-5545	-6278	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	1.5	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-3929760	False	NA	NA	False	AATAAA	-15	NA	3929819	3921464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_3921783_3924070_3924268_3929541
transcript_105857.nnic	chr4	-	810	3	NNC	ENSG00000271977.1	novel	530	4	NA	NA	-10677	-6278	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	8.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	-3934892	True	NA	NA	False	AATAAA	-15	NA	3934951	3921464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_3921783_3924070_3924268_3934656
transcript_105859.nnic	chr4	+	731	2	Antisense	novelGene_ENSG00000253917.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	50	junction_1	0	260	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	3927586	True	NA	20	True	AATAAA	-22	NA	3927646	3933044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_3927996_3932662
transcript_105863.known	chr4	-	2845	4	FSM	ENSG00000251669.6	ENST00000313946.12	2845	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.9053315024448	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAATTCCACCCATCTTT	-3954622	True	NA	NA	False	AAGAAA	-13	NA	3955415	3941759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_3943373_3947143_3948221_3953110_3953174_3955323
transcript_105865.nnic	chr4	-	1326	3	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	0	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCT	-4107502	False	NA	NA	False	TTTAAA	-6	NA	4107583	4048196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_4049172_4075351_4075399_4107279
transcript_105868.known	chr4	-	2276	2	FSM	ENSG00000284727.1	ENST00000641316.1	2276	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTTAAAATTTCTCTCTT	-4107502	False	NA	NA	False	NA	NA	NA	4107583	4048210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4050183_4107279
transcript_105869.nnic	chr4	-	1291	2	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	-12	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTGTACTCTGTCCT	-4107514	False	NA	NA	False	TTTAAA	-6	NA	4107595	4048196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_4049172_4107279
transcript_105870.nnic	chr4	-	668	2	NNC	ENSG00000284727.1	novel	2276	2	NA	NA	-59	6146	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	NA	False	NA	-29	True	AATAAA	-19	NA	4107642	4101133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_4101439_4107279
transcript_105871.known	chr4	-	1737	5	FSM	ENSG00000132406.12	ENST00000254742.6	1737	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	102.172342147961	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246543	True	NA	-1	True	AATAAA	-17	NA	4248212	4235541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4247600
transcript_105872.known	chr4	-	1243	5	FSM	ENSG00000132406.12	ENST00000382753.5	1243	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	21.4709105535839	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGAGTTTTGTTCATGC	-4246554	True	NA	-1	True	AATAAA	-17	NA	4248223	4235541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4236257_4237826_4237936_4240320_4240480_4246201_4246344_4248105
transcript_105880.known	chr4	-	1468	10	FSM	ENSG00000145220.14	ENST00000452476.5	1468	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	137.860190405952	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTTGTGGCAAAAAT	-4282236	False	NA	-3	True	AATAAA	-23	NA	4290021	4267703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4289985
transcript_105883.nnic	chr4	-	1552	9	NIC	ENSG00000145220.14	novel	1554	10	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_8	135.629089800087	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282421	True	NA	0	True	AATAAA	-26	NA	4290206	4267700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4290035
transcript_105886.known	chr4	-	1554	10	FSM	ENSG00000145220.14	ENST00000343470.9	1554	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_4	28.7573930376345	2574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGTGGCAAAAATTAC	-4282369	True	NA	0	True	AATAAA	-26	NA	4290154	4267700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4268024_4268529_4268616_4273582_4273670_4274366_4274770_4279446_4279531_4279641_4279750_4281782_4281898_4283620_4283796_4286518_4286573_4290035
transcript_105887.known	chr4	+	2886	8	FSM	ENSG00000168826.16	ENST00000337872.9	2886	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	7.35679610833356	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTTTCCTCTAGCAT	4289142	True	NA	NA	False	AATAAA	-18	NA	4290250	4321783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4290353_4299926_4300098_4301988_4303092_4306137_4306185_4313040_4313115_4315635_4315719_4315808_4315971_4320639
transcript_105891.nic	chr4	+	994	2	ISM	ENSG00000168826.16	ENST00000515012.5	2380	6	-23	20603	-23	-1479	5prime_fragment	FALSE	canonical	3	42	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTTAGAGTTAAGTGAT	4289119	True	NA	NA	False	NA	NA	NA	4290227	4300795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_4290353_4299926
transcript_105894.known	chr4	-	2158	11	FSM	ENSG00000168818.10	ENST00000306200.7	2158	11	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	18.3098334236006	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTCGGCCTCTGCAC	-4536197	True	NA	NA	False	AATAAA	-20	NA	4542048	4418967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_4420130_4420863_4420945_4423517_4423588_4425163_4425223_4434769_4434859_4438393_4438510_4457190_4457258_4457422_4457501_4459371_4459488_4471638_4471707_4541796
transcript_105915.known	chr4	+	2650	6	FSM	ENSG00000168824.15	ENST00000397958.5	2650	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	55.4739578541138	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4386255	4419058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4386644_4387118_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_105921.known	chr4	+	4172	9	FSM	ENSG00000168824.15	ENST00000421177.6	4172	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	65.1525853285961	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGCCCAGTGGACT	NA	False	NA	14	True	AATAAA	-14	NA	4348139	4419058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4348472_4380982_4381074_4385059_4385202_4385472_4385556_4385856_4387174_4387603_4387759_4391474_4391592_4409572_4409684_4417234
transcript_105936.known	chr4	+	3076	5	FSM	ENSG00000247708.8	ENST00000655855.1	3076	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	8.5841423566947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTATTTGTAAATTAC	4542402	False	NA	NA	False	ATTAAA	-2	NA	4542413	4732367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542476_4544737_4544908_4648976_4649110_4649372_4649543_4729826
transcript_105941.known	chr4	+	6201	5	FSM	ENSG00000247708.8	ENST00000656969.1	6201	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	9.31396800509858	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATACTTGATGCCAAAT	4539513	True	NA	NA	False	AATAAA	-17	NA	4542142	4710914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649110_4649369_4649543_4705672
transcript_105942.known	chr4	+	3048	5	FSM	ENSG00000247708.8	ENST00000664571.1	3048	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	10.816653826392	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATATCTCATGTGAAGG	4539501	True	NA	NA	False	NA	NA	NA	4542130	4731906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542626_4544737_4544908_4648976_4649110_4649372_4649543_4729826
transcript_105955.nnic	chr4	+	1150	3	NNC	ENSG00000247708.8	novel	3024	3	NA	NA	0	6627	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGTGTTTTGCGCTGT	4539501	True	NA	9	True	AATAAA	-18	NA	4542130	4569541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_4542476_4544737_4544908_4568906
transcript_105956.known	chr4	+	1405	3	FSM	ENSG00000247708.8	ENST00000512438.6	1405	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCATATATATGTGAAATAT	4539569	True	NA	NA	False	NA	NA	NA	4542198	4592031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542476_4544737_4544908_4591073
transcript_105962.known	chr4	+	2406	6	FSM	ENSG00000247708.8	ENST00000610009.5	2406	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.7086164228309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACCAAAAGGGAATTCTG	4539574	True	NA	NA	False	AATAAA	-41	NA	4542203	4710938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4542476_4544737_4544908_4648976_4649110_4649372_4649543_4705672_4705911_4709515
transcript_105963.nnic	chr4	+	2006	5	Fusion	ENSG00000247708.8_ENSG00000280310.1	novel	6201	5	NA	NA	0	19	multi-exon	FALSE	canonical	2	10	junction_3	8.07387763097757	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTCAGGTAGTTCCT	4539532	True	NA	NA	False	ATTAAA	-21	NA	4542161	4821471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr4_+_4542626_4544737_4544908_4648976_4649110_4649369_4649543_4820405
transcript_105964.known	chr4	+	1048	1	FSM	ENSG00000280310.1	ENST00000624794.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTCTTCATAAATTAC	NA	False	NA	NA	False	ATTAAA	-2	NA	4820404	4821452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_4820400_4821500
transcript_105966.nnic	chr4	-	1139	5	NNC	ENSG00000170891.11	novel	989	4	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	32.3303263206544	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018718	True	NA	0	True	AATAAA	-21	NA	5019493	5014585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_5015235_5016835_5016965_5017134_5017180_5018240_5018356_5019292
transcript_105970.known	chr4	-	989	4	FSM	ENSG00000170891.11	ENST00000307746.9	989	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3.55902608401044	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGTCCTGTTATATCTG	-5018683	True	NA	0	True	AATAAA	-21	NA	5019458	5014585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5015235_5016835_5016965_5017134_5017180_5019292
transcript_105977.known	chr4	-	285	3	FSM	ENSG00000170891.11	ENST00000509419.1	285	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACCAGAGAAAGAACCCA	-5018666	True	NA	NA	False	NA	NA	NA	5019441	5015143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5015235_5017134_5017180_5019292
transcript_105978.known	chr4	-	553	2	FSM	ENSG00000170891.11	ENST00000506508.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATGTTTTTATTACTG	-5018662	True	NA	NA	False	NA	NA	NA	5019437	5014826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5015235_5019292
transcript_105982.known	chr4	-	2911	14	FSM	ENSG00000072832.15	ENST00000397890.6	2911	14	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_4	32.9284682860992	1287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGACTAGGGCACTTTCAT	-5875470	True	NA	-23	True	AATAAA	-21	NA	5888481	5820782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5888227
transcript_105983.known	chr4	-	2764	14	FSM	ENSG00000072832.15	ENST00000512574.1	2764	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	187.992068320659	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGGTCCACACTAGAAAG	-5888924	False	NA	NA	False	NA	NA	NA	5890191	5821242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_5821852_5825493_5825660_5828488_5828669_5835914_5836086_5836764_5836907_5839521_5839679_5841307_5841429_5843092_5843162_5849391_5849473_5851407_5851470_5856142_5856308_5861025_5861211_5866667_5866757_5889624
transcript_105989.known	chr4	-	2585	13	FSM	ENSG00000152969.20	ENST00000282924.9	2585	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	8.18365579812728	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGCCTTTTTTATTTG	-6199812	True	NA	-1	True	AATAAA	-18	NA	6200591	6053756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6054149_6056696_6056760_6060423_6060508_6062311_6062441_6064879_6065009_6078938_6078999_6080171_6080313_6081608_6081756_6084845_6084966_6085419_6085630_6105472_6105968_6112721_6112998_6200252
transcript_105990.known	chr4	+	2635	4	FSM	ENSG00000249896.2	ENST00000636374.1	2635	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTAGATGCACGTGG	6222139	False	NA	NA	False	TATAAA	-23	NA	6222218	6234827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6222685_6226925_6227004_6228016_6228140_6232859
transcript_105991.known	chr4	+	3640	8	FSM	ENSG00000109501.15	ENST00000226760.5	3640	8	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	29.8219204407682	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTTTCCTTCCTTTCTTT	6267568	True	NA	32	True	AATAAA	-21	NA	6269849	6303265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6270015_6277450_6277688_6287092_6287176_6288986_6289132_6291196_6291368_6291916_6291998_6295040_6295190_6300656
transcript_105992.nic	chr4	+	746	3	ISM	ENSG00000013288.9	ENST00000504248.5	2968	19	-16	42539	-16	-31226	5prime_fragment	FALSE	canonical	3	27	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAAGGGTTGTTGTGAGT	6574728	True	NA	10	True	GATAAA	-24	NA	6575172	6578815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_6575349_6576577_6576725_6578392
transcript_105993.known	chr4	+	1574	2	FSM	ENSG00000179010.16	ENST00000382581.5	1574	2	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	0	1805	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAAGACCTAAAAGGTT	6627064	True	NA	20	True	AATAAA	-21	NA	6640684	6642729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6641259_6641729
transcript_105994.known	chr4	-	422	2	FSM	ENSG00000251580.3	ENST00000515205.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTCGAGGTGAACATAT	-6673567	False	NA	-13	True	AATAAA	-19	NA	6673830	6670724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6671000_6673683
transcript_105995.known	chr4	-	406	2	FSM	ENSG00000251580.3	ENST00000513179.1	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGTTTCGAGGTGAACA	-6673560	False	NA	-16	True	AATAAA	-16	NA	6673823	6670727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6670994_6673683
transcript_105997.known	chr4	-	2127	1	FSM	ENSG00000178988.11	ENST00000500563.2	2127	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704931	True	NA	31	True	AATAAA	-16	NA	6709827	6707700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6707700_6709800
transcript_105998.known	chr4	-	1578	2	FSM	ENSG00000178988.11	ENST00000320848.7	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	1582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGGAATGGATGTTC	-6704969	True	NA	31	True	AATAAA	-16	NA	6709865	6707700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6708644_6709230
transcript_105999.known	chr4	+	1491	1	FSM	ENSG00000186222.5	ENST00000320776.5	1491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	147	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTTTACGTATTTCCTTG	6711338	True	NA	40	True	AATAGA	-39	NA	6716173	6717664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6716200_6717700
transcript_1060.known	chr1	+	400	2	FSM	ENSG00000272004.1	ENST00000607013.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCTCATCTTTCCAG	1659244	False	NA	4	True	ATTAAA	-22	NA	1659324	1662602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1659453_1662330
transcript_106000.known	chr4	+	418	2	FSM	ENSG00000287331.1	ENST00000666330.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAGGATTCTTTCCCTCT	NA	False	NA	NA	False	CATAAA	-23	NA	6763507	6767660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6763713_6767447
transcript_106002.known	chr4	+	4149	12	FSM	ENSG00000132405.19	ENST00000451522.6	4149	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	29.7713046155589	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTTCACCATCGTTTG	6987148	False	NA	19	True	AATAAA	-20	NA	6987161	7033114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_6987350_6994183_6994303_6996324_6996408_6999084_6999203_7001144_7001252_7004843_7004925_7006631_7006727_7009876_7009949_7010652_7010782_7014447_7014558_7025003_7025263_7030326
transcript_106005.known	chr4	-	1111	1	FSM	ENSG00000287104.1	ENST00000664676.1	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	146	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATGAGTGGATCTCATG	-6986897	True	NA	-7	True	ATTAAA	-14	NA	6987036	6985925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_6985900_6987000
transcript_106008.known	chr4	-	2653	4	FSM	ENSG00000109519.13	ENST00000264954.5	2653	4	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	13.9124245031395	2902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGGCCCCTCATTGACT	-7051333	True	NA	-1	True	AGTAAA	-25	NA	7068064	7058894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_7061209_7062384_7062467_7064060_7064224_7067970
transcript_106009.known	chr4	+	579	1	FSM	ENSG00000250471.2	ENST00000514075.2	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTTCTTGTTCTATTAA	NA	False	NA	NA	False	NA	NA	NA	8174420	8174999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8174400_8175000
transcript_106010.known	chr4	-	2253	18	FSM	ENSG00000087008.16	ENST00000503233.5	2253	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_11	11.6372507722543	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGACTGGCACACATTCAG	-8427531	True	NA	NA	False	NA	NA	NA	8428486	8366960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_8367081_8370907_8370995_8373560_8373629_8374977_8375153_8381491_8381608_8389172_8389287_8389611_8389735_8392332_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_106019.nic	chr4	-	1593	11	ISM	ENSG00000087008.16	ENST00000503233.5	2253	18	-3	25232	-3	-10639	5prime_fragment	FALSE	canonical	3	46	junction_4	14.5013792447477	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCACCCCCGTTCATT	-8427534	True	NA	NA	False	AATAAA	-17	NA	8428489	8392192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_8392454_8394619_8394743_8396936_8397120_8399555_8399653_8405954_8406044_8410211_8410356_8414291_8414382_8414853_8414929_8415765_8416000_8416377_8416536_8428350
transcript_106020.nnic	chr4	+	407	2	NNC	ENSG00000155275.19	novel	541	2	NA	NA	16654	2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTCTTTATTGCAAAT	8490152	True	NA	28	True	AATAAA	-35	NA	8490169	8493533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_8490309_8493265
transcript_106021.known	chr4	+	2163	11	FSM	ENSG00000109625.19	ENST00000360986.9	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	20.3656573672445	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACTGGAATGAGAGGATCT	8591460	True	NA	11	True	ATTAAA	-18	NA	8592764	8619752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8592922_8599452_8599486_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_106022.known	chr4	+	2464	11	FSM	ENSG00000109625.19	ENST00000515606.1	2464	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	32.1323824202315	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACTGGAATGAGAGGATC	8591421	True	NA	10	True	ATTAAA	-17	NA	8592725	8619751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8592922_8599452_8599583_8600956_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_106025.known	chr4	+	2136	10	FSM	ENSG00000109625.19	ENST00000315782.6	2136	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	32.5113465473362	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTGGAATGAGAGGA	8591451	True	NA	8	True	ATTAAA	-15	NA	8592755	8619749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_8592922_8601122_8601498_8603975_8604189_8605988_8606186_8606736_8606899_8607266_8607426_8612026_8612163_8614358_8614499_8618428_8618529_8619261
transcript_106030.nnic	chr4	+	678	2	Genic_Genomic	ENSG00000284636.1	novel	218	1	NA	NA	-155	6194	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	9000647	True	NA	NA	False	AATAAA	-19	NA	9000685	9007252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_+_9001059_9006947
transcript_106036.nic	chr4	-	495	2	ISM	ENSG00000288075.1	ENST00000668176.1	2326	4	-61	21445	-61	-21445	5prime_fragment	FALSE	canonical	1	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCATCTTTTATTCTTCC	-9152297	False	NA	NA	False	NA	NA	NA	9152336	9151388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_9151440_9151892
transcript_106038.nnic	chr4	+	603	2	Genic_Genomic	ENSG00000284648.1	novel	219	1	NA	NA	-84	6144	multi-exon	FALSE	canonical	2	6	junction_1	0	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAATTCTGAATTTTATTT	9532030	True	NA	NA	False	AATAAA	-14	NA	9532344	9538791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_+_9532648_9538491
transcript_106040.known	chr4	-	567	3	FSM	ENSG00000109667.12	ENST00000505506.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGGCATTTCCCTCAT	-10019063	False	NA	NA	False	AATAAA	-25	NA	10019075	9995668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_9995974_9996780_9996942_10018974
transcript_106041.known	chr4	+	2376	1	FSM	ENSG00000169676.6	ENST00000304374.4	2376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGGTGACTATCTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	9781633	9784009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_9781600_9784000
transcript_106042.known	chr4	-	3510	2	FSM	ENSG00000261490.1	ENST00000561486.1	3510	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTCATGTGATTAATTCT	-10072937	False	NA	NA	False	AATAAA	-44	NA	10073019	10068088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10069825_10071245
transcript_106043.known	chr4	-	3142	15	FSM	ENSG00000071127.17	ENST00000382452.6	3142	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	423.642616277601	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	-10116727	False	NA	-10	True	ATTAAA	-15	NA	10116949	10074339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10097710_10097892_10098991_10099140_10103895_10103987_10116112_10116235_10116650
transcript_106047.known	chr4	-	2722	12	FSM	ENSG00000071127.17	ENST00000382451.6	2722	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	624.151973441095	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGGGTCACTGACTTTG	-10116727	False	NA	-10	True	ATTAAA	-15	NA	10116949	10074339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083177_10084440_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_106051.known	chr4	-	1691	12	FSM	ENSG00000071127.17	ENST00000502702.5	1691	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	624.151973441095	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTGGAGCATAACTAAAA	-10116505	False	NA	-2	True	AATAAA	-17	NA	10116727	10075148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10075485_10077303_10077449_10077752_10077927_10078890_10079002_10081356_10081445_10083021_10083179_10084442_10084531_10087706_10087941_10088292_10088374_10088663_10088742_10116112_10116235_10116650
transcript_106052.known	chr4	-	6954	3	FSM	ENSG00000178163.8	ENST00000326756.4	6954	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	23	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAACGTTATGCAGGTG	-10456331	True	NA	-11	True	AATAAA	-28	NA	10457426	10439879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10446540_10454804_10454989_10457316
transcript_106055.nnic	chr4	+	990	2	NNC	ENSG00000287154.1	novel	585	3	NA	NA	39714	0	intron_retention	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAATGTGACTTTTTG	10496438	True	NA	NA	False	AATAAA	-20	NA	10496458	10531022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_10496556_10530129
transcript_106056.known	chr4	-	2623	3	FSM	ENSG00000178163.8	ENST00000515072.1	2623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATGGTATTCTTTTCTGT	-10456313	True	NA	NA	False	AATAAA	-29	NA	10457408	10450886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_10453023_10454593_10454989_10457316
transcript_106057.known	chr4	-	7160	2	FSM	ENSG00000002587.10	ENST00000002596.6	7160	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGGATGTCTCTTTCTT	-11428847	True	NA	NA	False	GATAAA	-19	NA	11428894	11393149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_11400114_11428698
transcript_106060.nic	chr4	+	775	3	ISM	ENSG00000249631.7	ENST00000668579.1	1270	6	99698	0	51737	0	3prime_fragment	FALSE	canonical	1	2	junction_2	2	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATAGTCTGTGCTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	11822156	11823906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_11822475_11823038_11823209_11823619
transcript_106073.known	chr4	-	1785	8	FSM	ENSG00000157869.16	ENST00000288723.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	105.362542234527	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480737	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_106074.known	chr4	-	1690	7	FSM	ENSG00000157869.16	ENST00000330852.10	1690	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	45.3051382908777	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480737	True	NA	-11	True	AATAAA	-14	NA	13484340	13367723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_106075.known	chr4	-	1787	8	FSM	ENSG00000157869.16	ENST00000338176.8	1787	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	141.967659438798	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13371794_13371868_13376544_13376623_13381490_13381595_13460698_13460829_13474317_13474407_13479429_13479527_13484075
transcript_106076.known	chr4	-	1679	7	FSM	ENSG00000157869.16	ENST00000630951.1	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	129.891514563329	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTTTGGCAATTTTCT	NA	False	NA	-12	True	AATAAA	-13	NA	13484365	13367724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13369870_13369966_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_106077.known	chr4	-	1551	6	FSM	ENSG00000157869.16	ENST00000508274.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	119.095927722152	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTTTGGCAATTTTCTT	-13480728	True	NA	-11	True	AATAAA	-14	NA	13484331	13367723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_13368651_13376544_13376623_13381490_13381595_13474317_13474407_13479429_13479527_13484075
transcript_106085.nnic	chr4	-	502	3	NNC	ENSG00000249252.5	novel	630	6	NA	NA	-51193	-118116	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTGCACACAAGAATCCAT	-15279019	True	NA	NA	False	AATAAA	-23	NA	15279153	15124562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15124843_15263396_15263465_15278999
transcript_106087.nnic	chr4	-	959	3	Intergenic	novelGene_46	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	4.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTCTCCCTTATTCAT	-15279036	True	NA	NA	False	AATAAA	-34	NA	15279170	15216944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr4_-_15217561_15277380_15277553_15278999
transcript_106088.known	chr4	+	4989	35	FSM	ENSG00000048342.18	ENST00000506643.5	4989	35	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_30	7.67872403255685	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGTGCAAAGTGTTCTA	15478508	True	NA	12	True	AATAAA	-17	NA	15479203	15601549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624_15516757_15527446_15527657_15528619_15528727_15533192_15533334_15536919_15537077_15537898_15538138_15540836_15541015_15550823_15550981_15553157_15553306_15555071_15555211_15557303_15557508_15559164_15559258_15560530_15560623_15563354_15563523_15567376_15567483_15567676_15567787_15569292_15569390_15570397_15570497_15574149_15574327_15579967_15580172_15586156_15586247_15587815_15587930_15589544_15589680_15596084_15596208_15597406_15597466_15599528_15599707_15601236
transcript_106089.nic	chr4	+	1204	9	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-19	23474	-7	5130	5prime_fragment	FALSE	canonical	3	20	junction_6	9.84806453065779	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTCTGAATAGCTT	15478501	True	NA	NA	False	ATTAAA	-15	NA	15479196	15516802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246_15511424_15514706_15514870_15515867_15516005_15516624
transcript_10609.known	chr1	-	710	4	FSM	ENSG00000189171.15	ENST00000440685.7	710	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	165.791703317412	7985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCCCATCCTGATTTCTT	-153627787	False	461	-7	True	AATAAA	-34	NA	153628248	153618786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153627482_153627599_153628120
transcript_106091.known	chr4	+	1121	8	FSM	ENSG00000048342.18	ENST00000514450.3	1121	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	15.6021976474012	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	15469782	False	NA	9	True	ATTAAA	-37	NA	15469920	15511672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_106093.nic	chr4	+	975	6	ISM	ENSG00000048342.18	ENST00000651385.1	3427	15	-19	28604	-7	0	5prime_fragment	FALSE	canonical	3	31	junction_2	5.8309518948453	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTGGCTTGAGGGTTTT	15478501	True	NA	9	True	ATTAAA	-37	NA	15479196	15511672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_15479329_15480703_15480828_15502428_15502518_15502821_15502924_15510138_15510241_15511246
transcript_106095.known	chr4	+	1521	5	FSM	ENSG00000048342.18	ENST00000515124.6	1521	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	7.24568837309472	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTCATATGGCTGTTT	15469726	True	NA	NA	False	AATAAA	-14	NA	15469864	15482259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15470058_15475914_15475972_15478722_15478807_15480703_15480828_15481196
transcript_106100.known	chr4	+	754	3	FSM	ENSG00000048342.18	ENST00000652443.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	7.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTCAGATATTC	15478520	True	NA	NA	False	AATAAA	-18	NA	15479215	15481713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15479329_15480703_15480828_15481196
transcript_106102.known	chr4	-	2837	11	FSM	ENSG00000118564.15	ENST00000412094.6	2837	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_10	110.804512543488	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTGTGTTGTGATTTT	-15649374	True	NA	0	True	AATAAA	-28	NA	15655382	15605005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15605800_15612265_15612415_15625251_15625978_15626872_15626956_15627884_15628034_15630665_15630792_15636493_15636677_15638507_15638695_15640787_15640884_15644492_15644658_15655203
transcript_106104.known	chr4	+	1979	9	FSM	ENSG00000109743.11	ENST00000265016.9	1979	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.64005494464026	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGTCCAGAATTGTG	15702856	True	NA	NA	False	AATAAA	-29	NA	15703064	15732787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15703333_15705514_15705642_15707510_15707647_15711806_15711890_15715284_15715362_15715706_15715800_15718906_15718994_15722874_15722935_15731739
transcript_106114.known	chr4	+	635	4	FSM	ENSG00000237765.8	ENST00000504823.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	20.0388511535855	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGATTATGAAACCTTAAGT	15681618	False	NA	NA	False	AATGAA	-35	NA	15681668	15688694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681785_15686235_15686463_15687000_15687149_15688550
transcript_106120.known	chr4	+	958	4	FSM	ENSG00000237765.8	ENST00000502856.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	11.2249721603218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTTTGTATTTCTTA	15679046	True	NA	8	True	AATAAA	-14	NA	15681860	15688972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15682022_15686235_15686463_15687000_15687149_15688550
transcript_106126.known	chr4	+	785	3	FSM	ENSG00000237765.8	ENST00000515430.5	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	21	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGCTAACACAGCTGCTGA	15678941	True	NA	NA	False	NA	NA	NA	15681755	15687460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681785_15686235_15686463_15686931
transcript_106127.known	chr4	+	662	3	FSM	ENSG00000237765.8	ENST00000510920.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	24.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTATTGATAAGCCTC	15681611	True	NA	NA	False	ATTAAA	-25	NA	15681661	15687312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681785_15686235_15686463_15687000
transcript_106132.known	chr4	+	748	3	FSM	ENSG00000237765.8	ENST00000513053.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATGCTGAACTTATTGAT	15678991	True	NA	NA	False	ATTAAA	-18	NA	15681805	15687305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15682022_15686235_15686463_15687000
transcript_106135.known	chr4	+	524	3	FSM	ENSG00000237765.8	ENST00000514803.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	19	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15679008	True	NA	9	True	AATAAA	-16	NA	15681822	15686606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15684885_15684960_15686235
transcript_106136.known	chr4	+	588	3	FSM	ENSG00000237765.8	ENST00000502502.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGTCTAAAAAACAAAAT	15678942	True	NA	-29	True	AATGAA	-2	NA	15681756	15686568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15684849_15684960_15686235
transcript_106137.known	chr4	+	444	3	FSM	ENSG00000237765.8	ENST00000507992.5	444	3	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	21	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTATACAAGTCAACAGTC	15678981	True	NA	NA	False	GATAAA	-21	NA	15681795	15686396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15684849_15684960_15686235
transcript_106148.nic	chr4	+	798	2	ISM	ENSG00000237765.8	ENST00000510920.5	662	3	-304	706	-304	0	5prime_fragment	FALSE	canonical	3	53	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	NA	False	NA	9	True	AATAAA	-16	NA	15681357	15686606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_15681785_15686235
transcript_106149.known	chr4	+	639	2	FSM	ENSG00000237765.8	ENST00000510032.5	639	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCATGAATCCTTT	15678939	True	NA	9	True	AATAAA	-16	NA	15681753	15686606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15682022_15686235
transcript_10615.known	chr1	+	522	3	FSM	ENSG00000160678.12	ENST00000368696.3	522	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGCCTGTAACAATTTCT	153628363	True	NA	NA	False	NA	NA	NA	153628421	153631804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153628497_153630508_153630663_153631511
transcript_106150.nnic	chr4	-	941	2	NNC	ENSG00000118564.15	novel	591	3	NA	NA	-64	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	381	junction_1	0	2061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15681732	False	NA	-7	True	ATTAAA	-42	NA	15681743	15667563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15668041_15681279
transcript_106151.nnic	chr4	-	911	2	NNC	ENSG00000118564.15	novel	532	4	NA	NA	-107	-7833	at_least_one_novel_splicesite	FALSE	canonical	3	179	junction_1	0	1586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAGTTTGCCTGTGATC	-15681775	False	NA	-7	True	ATTAAA	-42	NA	15681786	15667563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_15668041_15681352
transcript_106152.known	chr4	+	431	3	FSM	ENSG00000237765.8	ENST00000510186.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	2	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTAAGTGCAAGAC	15679091	False	NA	NA	False	NA	NA	NA	15681905	15687141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15686235_15686463_15687000
transcript_106153.known	chr4	+	1136	4	FSM	ENSG00000237765.8	ENST00000505260.5	1136	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	99.6527303522922	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGAACAAAAATTTAATGAA	15678941	True	NA	NA	False	AATAAA	-16	NA	15681755	15689096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15686235_15686463_15686931_15687149_15688550
transcript_106154.known	chr4	+	800	3	FSM	ENSG00000237765.8	ENST00000507305.5	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	72.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAACACAGCTGCTGAAA	15678976	True	NA	NA	False	NA	NA	NA	15681790	15687462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681902_15686235_15686463_15687000
transcript_106155.known	chr4	+	654	3	FSM	ENSG00000237765.8	ENST00000512855.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	47.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAGTGCAAGACGTTA	15678941	True	NA	NA	False	AAAAAG	-4	NA	15681755	15687145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_15681969_15686235_15686463_15686931
transcript_106158.known	chr4	-	1351	3	FSM	ENSG00000137440.5	ENST00000382333.2	1351	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAACATTGCTTGGTT	NA	False	NA	NA	False	AATAAA	-24	NA	15938740	15935576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15936653_15938250_15938472_15938686
transcript_106159.known	chr4	-	4014	27	FSM	ENSG00000007062.12	ENST00000508167.5	4014	27	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_26	48.7381756256183	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTCTGTATGTTACTTC	-16083700	False	NA	-5	True	AATAAA	-16	NA	16083732	15968229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083664
transcript_10616.known	chr1	+	559	3	FSM	ENSG00000160678.12	ENST00000292169.6	559	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGATGTCTGTCTCCTCTG	153628375	True	NA	7	True	ATTAAA	-21	NA	153628433	153632039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153628497_153630508_153630663_153631697
transcript_106160.known	chr4	-	4349	27	FSM	ENSG00000007062.12	ENST00000505450.5	4349	27	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_26	36.4620253132054	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTATGTTACTTCCT	-16084346	False	NA	-3	True	AATAAA	-18	NA	16084378	15968227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15969369_15971042_15971083_15979394_15979464_15979880_15979905_15980421_15980538_15984262_15984356_15985759_15985829_15985956_15986038_15987662_15987717_15989731_15989825_15991221_15991294_15992247_15992392_15993986_15994072_15998384_15998489_16000495_16000620_16006537_16006691_16008948_16009109_16013274_16013339_16016165_16016241_16018322_16018541_16023325_16023416_16024294_16024359_16025191_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_106165.nic	chr4	-	1093	5	ISM	ENSG00000007062.12	ENST00000505450.5	4349	27	307	56780	-48	-6707	5prime_fragment	FALSE	canonical	3	126	junction_4	40.1396001474853	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAATTTCAGAATTGGTG	-16084039	False	NA	NA	False	AATAAA	-36	NA	16084071	16025007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_16025313_16033303_16033510_16038945_16039002_16075686_16076119_16083977
transcript_106166.known	chr4	-	1105	2	FSM	ENSG00000137441.8	ENST00000259989.7	1105	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGACTTTAGTCTTCTTAA	NA	False	NA	NA	False	AATAAA	-17	NA	15963175	15960244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_15960612_15962437
transcript_106167.known	chr4	-	248	1	FSM	ENSG00000242358.1	ENST00000487122.1	248	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAGAGAATCACGGATGT	-16256544	False	NA	NA	False	NA	NA	NA	16256555	16256307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16256300_16256600
transcript_106170.known	chr4	-	2476	9	FSM	ENSG00000169744.13	ENST00000441778.6	2476	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	68.4027594472621	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	-16898315	False	NA	-7	True	AATAAA	-18	NA	16898594	16501540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16502874_16505839_16505983_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_106179.known	chr4	-	2295	8	FSM	ENSG00000169744.13	ENST00000515064.5	2295	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	51.183144546953	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTGAATCTGGCTATTT	-16898283	False	NA	-7	True	AATAAA	-18	NA	16898562	16501540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16502874_16508540_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_10618.known	chr1	-	547	3	FSM	ENSG00000189171.15	ENST00000392622.3	547	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	201	1743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	-153626587	False	NA	-24	True	AATAAA	-17	NA	153627048	153618803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153626950
transcript_106183.known	chr4	-	2626	8	FSM	ENSG00000169744.13	ENST00000502640.5	2626	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	69.2510959170632	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCAAGTGAATCTGGC	-16893495	True	NA	-12	True	AATAAA	-13	NA	16898634	16501545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_16503132_16508534_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_10619.known	chr1	-	579	3	FSM	ENSG00000189171.15	ENST00000392623.5	579	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	191.5	1847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATGTTTCTTACTTACA	-153626807	False	NA	-24	True	AATAAA	-17	NA	153627268	153618803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153627138
transcript_106190.nic	chr4	-	1341	7	ISM	ENSG00000169744.13	ENST00000304523.10	2384	8	-191	6895	-158	3549	5prime_fragment	FALSE	canonical	3	146	junction_1	24.8439574589521	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGCAGGTTGGAGGTG	NA	False	NA	NA	False	ATTAAA	-30	NA	16898836	16508435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_106191.nic	chr4	-	1136	7	ISM	ENSG00000169744.13	ENST00000304523.10	2384	8	-191	7100	-158	3344	5prime_fragment	FALSE	canonical	3	146	junction_1	24.8439574589521	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACCAGCAGCACTTCCA	NA	False	NA	15	True	AAAAAG	-7	NA	16898836	16508640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_16508687_16511980_16512105_16585921_16586006_16588709_16588833_16595702_16595876_16759157_16759261_16898353
transcript_106206.nnic	chr4	-	1327	4	NNC	ENSG00000169744.13	novel	499	7	NA	NA	771	-25848	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.62466929133727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTCATTATTTGTCAT	-16897328	False	NA	-8	True	AATAAA	-17	NA	16897607	16776697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_16777559_16778458_16778643_16888673_16888759_16897410
transcript_10621.known	chr1	-	514	3	FSM	ENSG00000189171.15	ENST00000339556.8	514	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	195.5	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	-153627719	False	NA	-19	True	AATAAA	-22	NA	153628180	153618798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153628120
transcript_106236.known	chr4	-	1507	7	FSM	ENSG00000151552.12	ENST00000281243.10	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_4	20.0969870599771	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCCTGATTCTGCCTT	-17507668	True	NA	-8	True	AATAAA	-17	NA	17512090	17486394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_106243.known	chr4	-	1278	6	FSM	ENSG00000151552.12	ENST00000428702.6	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	204.4524394572	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAAATCACATCTTATAT	-17507664	True	NA	-16	True	AATAAA	-24	NA	17512086	17486526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17490661_17490746_17492231_17492341_17501718_17501860_17504378_17504476_17511949
transcript_106244.known	chr4	-	1374	6	FSM	ENSG00000151552.12	ENST00000507439.5	1374	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	209.519831996878	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACACAGGCCTGATTCTGC	-17507647	True	NA	-11	True	AATAAA	-14	NA	17512069	17486397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17490661_17490746_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_10625.known	chr1	-	477	3	FSM	ENSG00000189171.15	ENST00000476133.6	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	67	8007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTTACTTACACCCCA	-153619330	True	NA	-19	True	AATAAA	-22	NA	153627505	153618798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153619039_153626319_153626534_153627482
transcript_106255.known	chr4	-	601	5	FSM	ENSG00000151552.12	ENST00000508623.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	227.781007768427	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCCAGAAAAGTCACTAAC	-17507665	True	NA	NA	False	NA	NA	NA	17512087	17487104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17487237_17501718_17501860_17504378_17504476_17509270_17509364_17511949
transcript_10626.known	chr1	+	1923	5	FSM	ENSG00000160679.13	ENST00000403433.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	315.642598519275	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACCCAGGACTCTCTTTA	153620335	True	NA	13	True	NA	NA	NA	153634079	153646302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153645063
transcript_106263.known	chr4	+	1876	13	FSM	ENSG00000002549.13	ENST00000606142.5	1876	13	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_5	34.2474654374435	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTGTCAGAAACAATAAAT	17571282	True	NA	-28	True	NA	NA	NA	17577494	17607934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287_17582394_17583482_17583643_17584971_17585137_17588818_17588978_17595409_17595535_17597045_17597135_17598455_17598559_17604587_17604668_17606828_17606939_17607399
transcript_10627.known	chr1	+	2079	6	FSM	ENSG00000160679.13	ENST00000368694.8	2079	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_3	175.693369254505	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGACTCTCTTTATTTG	153620321	True	NA	17	True	NA	NA	NA	153634065	153646306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153634344_153636571_153636654_153638294_153638449_153642245_153642430_153643226_153643365_153645063
transcript_106275.known	chr4	+	689	4	FSM	ENSG00000002549.13	ENST00000512397.1	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	18.006171781426	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTGTAATGCCACCCT	17571239	True	NA	NA	False	NA	NA	NA	17577451	17582689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17577568_17579823_17579940_17581759_17581815_17582287
transcript_106277.known	chr4	+	651	3	FSM	ENSG00000002549.13	ENST00000508497.5	651	3	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_1	21.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGTGCGTTTAGCCCTGTT	17571213	True	NA	NA	False	AAAAAG	-16	NA	17577425	17582152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17577568_17579823_17579940_17581759
transcript_10628.known	chr1	+	2553	3	FSM	ENSG00000160679.13	ENST00000495554.1	2553	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	437.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTTTTGTTTTTGT	153620330	True	NA	-95	True	NA	NA	NA	153634074	153645470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153634344_153636571_153638449_153645063
transcript_106281.known	chr4	+	10858	4	FSM	ENSG00000118579.13	ENST00000237380.12	10858	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	51.0511725842044	1616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGAGATGGATGTGTT	17603737	True	NA	17	True	AATAAA	-30	NA	17614640	17634105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600
transcript_106282.known	chr4	+	347	2	FSM	ENSG00000118579.13	ENST00000506409.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	3	960	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTAAAATGTGTGCACATAA	17603744	True	NA	NA	False	NA	NA	NA	17614647	17620081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17614814_17619900
transcript_106283.known	chr4	+	879	6	FSM	ENSG00000118579.13	ENST00000503945.2	879	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	443.248192325699	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACGTACAAAGAAAATTCA	17603760	True	NA	16	True	AATAAA	-22	NA	17614663	17628170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17614814_17619900_17619968_17621586_17621700_17623600_17623795_17625655_17625846_17628005
transcript_106300.nic	chr4	-	464	2	ISM	ENSG00000163257.11	ENST00000382247.6	4547	3	-12	4430	-11	-773	5prime_fragment	FALSE	canonical	3	25	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATAGCTCTCTATTTG	-17802596	True	NA	NA	False	NA	NA	NA	17810769	17805084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_17805226_17810446
transcript_106301.known	chr4	-	533	2	FSM	ENSG00000163257.11	ENST00000507731.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTTGCATGTTTTAACC	-17802538	True	NA	1	True	AATAAA	-22	NA	17810711	17809424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17809693_17810446
transcript_106303.known	chr4	-	4547	3	FSM	ENSG00000163257.11	ENST00000382247.6	4547	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTATGGTCATTTGTCC	-17802584	True	NA	-5	True	AATAAA	-24	NA	17810757	17800654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17804772_17805106_17805226_17810446
transcript_106304.known	chr4	-	5604	7	FSM	ENSG00000178177.16	ENST00000326877.8	5604	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	45.3970140966219	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAATTTCAGATTTTTT	-18021866	False	NA	-23	True	AATAAA	-13	NA	18021876	17841198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_17845902_17886067_17886162_17909093_17909346_17961902_17962033_17962969_17963050_17972819_17972886_18021597
transcript_106309.known	chr4	+	4587	21	FSM	ENSG00000109805.10	ENST00000251496.7	4587	21	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_8	45.1290095171609	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTAGTATTCTGAGTATT	17803089	True	NA	4	True	AATAAA	-14	NA	17810978	17844865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17811189_17812220_17812425_17812916_17813146_17814852_17814999_17815273_17815359_17817260_17817454_17817938_17818089_17822982_17823124_17823646_17823771_17824967_17825058_17825381_17825562_17828277_17828389_17830996_17831117_17834298_17834524_17837158_17837341_17837626_17837802_17839675_17839838_17840070_17840210_17840606_17840694_17842309_17842380_17843301
transcript_106326.known	chr4	+	795	3	FSM	ENSG00000109805.10	ENST00000513226.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCCCTCAGAAGTAACTAT	17803138	True	NA	NA	False	AAAAAG	-33	NA	17811027	17813346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_17811189_17812220_17812425_17812916
transcript_106329.known	chr4	+	483	1	FSM	ENSG00000241612.1	ENST00000488289.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTGTTAAAAATAAATAA	NA	False	NA	NA	False	NA	NA	NA	19813748	19814231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_19813700_19814200
transcript_106333.known	chr4	+	6309	9	FSM	ENSG00000163138.19	ENST00000503585.6	6309	9	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_8	6.50840802347241	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTTTGTTTCAGTAAA	20699800	True	NA	NA	False	ATTAAA	-17	NA	20700457	20732557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20724807_20724889_20727284
transcript_106335.known	chr4	+	1373	9	FSM	ENSG00000163138.19	ENST00000467997.6	1373	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	5.58457697592217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAGAGTGATTAACTGA	20699819	True	NA	-1	True	AATAAA	-7	NA	20700476	20752888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284_20727398_20752564
transcript_106341.known	chr4	+	2073	8	FSM	ENSG00000163138.19	ENST00000360916.9	2073	8	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	5.08298482133063	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGATTTTGTTGTGCT	20699755	True	NA	10	True	ATTAAA	-22	NA	20700412	20728357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20707802_20707871_20709682_20709774_20712787_20712923_20713431_20713540_20727284
transcript_106368.known	chr4	+	1720	5	FSM	ENSG00000163138.19	ENST00000444671.6	1720	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	5.67890834580027	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCAGCAATTAAAATGTT	20699778	True	NA	-26	True	NA	NA	NA	20700435	20728321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20713431_20713540_20727284
transcript_106373.known	chr4	+	810	4	FSM	ENSG00000163138.19	ENST00000502938.5	810	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.2089285540757	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACAATTTTGAGGTTT	20699801	True	NA	NA	False	ATTAAA	-13	NA	20700458	20727542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_20700788_20704465_20704534_20704659_20704815_20727284
transcript_106374.known	chr4	-	4577	19	FSM	ENSG00000152990.14	ENST00000334304.10	4577	19	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_7	28.4644027202789	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTTATTTTTATATTT	-22512362	True	NA	-2	True	AATAAA	-21	NA	22516066	22387375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_22388948_22389087_22389184_22392544_22392691_22401430_22401555_22402674_22402800_22413181_22413391_22413600_22413815_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22444972_22445134_22447439_22447512_22454865_22454938_22461736_22461809_22473771_22473844_22515527
transcript_106375.known	chr4	-	1572	8	FSM	ENSG00000152990.14	ENST00000508133.5	1572	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	145.040740230222	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTGTGCTTCTTTATCA	NA	False	NA	NA	False	NA	NA	NA	22443135	22414193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_22414607_22420885_22421090_22424190_22424353_22435310_22435467_22436439_22436642_22438255_22438421_22442649_22442864_22443079
transcript_106383.known	chr4	-	2998	14	FSM	ENSG00000109606.13	ENST00000336812.5	2998	14	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_5	118.504437786726	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCCAAAGCCCTTTGG	-24548931	True	NA	-13	True	AATAAA	-16	NA	24584554	24527474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_24528042_24529600_24529771_24532863_24533055_24537050_24537174_24540107_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_106387.nic	chr4	-	2257	10	ISM	ENSG00000109606.13	ENST00000336812.5	2998	14	-53	12376	-53	-142	5prime_fragment	FALSE	canonical	3	1041	junction_1	133.06138934091	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAGTTGTAACTGAATTC	-24584582	False	NA	1	True	AATAAA	-18	NA	24584607	24539850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_24540300_24540839_24540949_24541872_24542023_24542939_24543027_24548854_24549023_24554724_24554944_24556250_24556411_24570653_24570848_24576242_24576679_24584322
transcript_106394.known	chr4	-	567	3	FSM	ENSG00000109606.13	ENST00000513092.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTATCAGTGCTGGAT	-24548914	True	NA	48	True	AAGAAA	-32	NA	24584537	24576549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_24576679_24580719_24580943_24584322
transcript_106395.known	chr4	+	2195	2	FSM	ENSG00000261121.2	ENST00000569621.1	2195	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGGATGGCATCTTTTATT	24659790	True	NA	5	True	AATAAA	-14	NA	24659855	24671568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_24660044_24669561
transcript_106397.known	chr4	-	3869	12	FSM	ENSG00000181982.19	ENST00000504487.5	3869	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.42088867676851	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACAGCTGTCTTTTGTCT	-24912859	False	NA	-5	True	ATTAAA	-18	NA	24912886	24806116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_24808820_24819858_24819976_24822496_24822574_24831505_24831651_24834947_24835033_24836435_24836509_24837227_24837401_24838155_24838273_24853071_24853180_24873680_24873720_24876535_24876698_24912816
transcript_106399.known	chr4	-	5503	11	FSM	ENSG00000109618.13	ENST00000382103.7	5503	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	4.72122865364515	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTACGTTATTTTAC	-25160005	True	NA	-7	True	AATAAA	-41	NA	25160449	25120013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_25124226_25125693_25125785_25127263_25127358_25144773_25144866_25145003_25145134_25151959_25152063_25154997_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_106401.known	chr4	-	2072	5	FSM	ENSG00000109618.13	ENST00000681640.1	2072	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.63145976158349	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATTAAATTTTAAAAC	-25160019	True	NA	NA	False	NA	NA	NA	25160463	25153720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_25155152_25156036_25156196_25156855_25156975_25158952_25159108_25160255
transcript_106404.known	chr4	+	3594	10	FSM	ENSG00000038210.14	ENST00000264864.8	3594	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	11.8602979164381	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTG	25230996	True	NA	NA	False	ATTAAA	-18	NA	25234032	25279204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25234432_25252320_25252476_25255064_25255266_25256542_25256675_25259036_25259191_25260523_25260592_25263749_25263850_25268442_25268577_25269143_25269204_25277013
transcript_106407.known	chr4	+	383	2	FSM	ENSG00000281501.1	ENST00000510415.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGTCGGAATACTGG	25160186	True	NA	7	True	ATTAAA	-17	NA	25160640	25161687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25160754_25161417
transcript_106408.known	chr4	+	4055	2	FSM	ENSG00000281501.1	ENST00000507794.2	4055	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTGCACACGCATGTT	25160217	True	NA	NA	False	NA	NA	NA	25160671	25201440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25160754_25197467
transcript_10641.known	chr1	+	1003	4	FSM	ENSG00000143553.11	ENST00000368685.6	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_3	45.675181687895	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAGGTTCCAGGAGTTT	153654329	True	NA	37	True	AATAAA	-35	NA	153658702	153661852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153658887_153659137_153659185_153659447_153659567_153661199
transcript_106410.known	chr4	+	2797	13	FSM	ENSG00000168228.16	ENST00000302874.9	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	22.6683516530573	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGCTCTCAGTTCTC	25309449	True	NA	11	True	ATTAAA	-16	NA	25312773	25370383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021_25365167_25369028
transcript_106413.nic	chr4	+	2394	12	ISM	ENSG00000168228.16	ENST00000302874.9	2797	13	-3	4268	-3	0	5prime_fragment	FALSE	canonical	3	99	junction_7	21.4614780786952	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTCTTTCCCATGTGTTT	25309446	True	NA	4	True	NA	NA	NA	25312770	25366115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25361858_25361981_25362225_25362302_25364453_25364506_25365021
transcript_106416.known	chr4	+	1504	9	FSM	ENSG00000168228.16	ENST00000505451.5	1504	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	49.0661224777341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGACTACAAACATGTGCCA	25309460	True	NA	NA	False	NA	NA	NA	25312784	25352541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491_25349643_25351588_25351690_25352073
transcript_106417.nic	chr4	+	991	8	NNC	ENSG00000168228.16	novel	1504	9	NA	NA	-3	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	54.4137587642789	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	25309446	True	NA	6	True	AATAAA	-17	NA	25312770	25349685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_106419.nic	chr4	+	992	7	ISM	ENSG00000168228.16	ENST00000505451.5	1504	9	-14	2856	-3	-2856	5prime_fragment	FALSE	canonical	3	121	junction_6	17.8364483260791	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	25309446	True	NA	6	True	AATAAA	-17	NA	25312770	25349685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_25312937_25314045_25314165_25315317_25315401_25333182_25333459_25333907_25333989_25345547_25345621_25349491
transcript_10642.known	chr1	+	922	3	FSM	ENSG00000143553.11	ENST00000462880.1	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	291	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTAGTTTACTCTGGT	153654340	True	NA	14	True	AATAAA	-12	NA	153658713	153661829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153658887_153659447_153659567_153661199
transcript_106422.nnic	chr4	+	517	5	NNC	ENSG00000168228.16	novel	1504	9	NA	NA	-3	-32044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	77.7962081338159	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGCCTGCAATTTGTGA	25309446	True	NA	NA	False	AATAAA	-16	NA	25312770	25320497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315401_25319714_25319742_25320375
transcript_106423.known	chr4	+	938	11	NNC	ENSG00000168228.16	novel	2797	13	NA	NA	23	-2856	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	74.8668150785113	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTGTCAAATATTAG	25309493	True	NA	6	True	AATAAA	-17	NA	25312817	25349685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_25312937_25314045_25314165_25315317_25315394_25333178_25333286_25333286_25333296_25333296_25333303_25333303_25333310_25333310_25333459_25333907_25333989_25345547_25345621_25349491
transcript_106427.known	chr4	+	2599	29	FSM	ENSG00000053900.11	ENST00000510092.5	2599	29	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_18	58.9432773858019	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCATATTCTGCTTC	25372216	True	NA	9	True	AATAAA	-12	NA	25377292	25418489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25377345_25377417_25377557_25380373_25380480_25383260_25383394_25388499_25388575_25388716_25388744_25388837_25388883_25390135_25390221_25390910_25391016_25392337_25392422_25393804_25393892_25394309_25394375_25394670_25394714_25394828_25394906_25396663_25396765_25396847_25396900_25402970_25403027_25405572_25405623_25406828_25406886_25407196_25407254_25409697_25409792_25413644_25413743_25414323_25414386_25414465_25414505_25414598_25414701_25415465_25415541_25416424_25416599_25417615_25417740_25418154
transcript_10643.known	chr1	+	4185	22	FSM	ENSG00000169418.10	ENST00000368680.4	4185	22	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_21	15.6597900670255	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTCTCTTCTTGAGGGA	153678043	True	NA	27	True	ATTAAA	-17	NA	153678687	153693992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153679830_153680500_153680701_153681179_153681294_153681703_153681840_153682497_153682590_153683375_153683512_153683739_153683825_153684963_153685085_153685805_153685881_153686122_153686201_153686645_153686751_153687015_153687088_153687199_153687357_153687633_153687790_153688052_153688222_153688952_153689100_153689187_153689312_153689452_153689522_153689805_153689981_153690283_153690383_153693105_153693198_153693351
transcript_10644.known	chr1	+	5252	30	FSM	ENSG00000143624.14	ENST00000318967.7	5252	30	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	68.6307738215072	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTGGCCCCAATT	NA	False	NA	5	True	ATTAAA	-17	NA	153728049	153774808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153728785_153740650_153740735_153741284_153741369_153746956_153747071_153747278_153747364_153748688_153748756_153751094_153751240_153752278_153752409_153754641_153754740_153757571_153757764_153759525_153759614_153760310_153760391_153760826_153760919_153761569_153761677_153762727_153762848_153763232_153763363_153763831_153763887_153764117_153764222_153764689_153764735_153764943_153765064_153767673_153767828_153768892_153768962_153769768_153769845_153770197_153770312_153770684_153770734_153771795_153771964_153772339_153772441_153772638_153772712_153772924_153773082_153773192
transcript_106445.nic	chr4	+	609	3	ISM	ENSG00000053900.11	ENST00000505080.1	569	8	-99	9469	-47	106	5prime_fragment	TRUE	canonical	3	302	junction_1	18	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCGAAGTGAAATCTGATG	25372139	True	NA	NA	False	AATAAA	-24	NA	25377215	25380714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_25377345_25377417_25377557_25380373
transcript_106450.known	chr4	+	773	3	FSM	ENSG00000250317.9	ENST00000515764.2	773	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	293.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGAAGGTCCGGGTCTCTT	NA	False	NA	NA	False	AATACA	-16	NA	25861829	25929545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25862154_25928312_25928370_25929153
transcript_106461.known	chr4	+	774	2	FSM	ENSG00000250317.9	ENST00000514384.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCAGTGGTGTCTTTTTG	25910519	True	NA	15	True	ATTAAA	-16	NA	25914308	25929813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25914423_25929153
transcript_106463.known	chr4	+	935	3	FSM	ENSG00000250317.9	ENST00000506197.3	919	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	587	junction_2	17.5	9781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTGGTGTCTTTTT	25910414	True	NA	14	True	ATTAAA	-15	NA	25914203	25929812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_25914423_25928312_25928370_25929153
transcript_10647.known	chr1	-	7475	11	FSM	ENSG00000143614.10	ENST00000368655.5	7475	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	12.1720992437624	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCCTGTGGCTTGTGCTT	-153921491	True	NA	-3	True	AATAAA	-21	NA	153922972	153804724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153810311_153811730_153811849_153812021_153812133_153813249_153813453_153816272_153816589_153817371_153817543_153818039_153818172_153818790_153818923_153819605_153819736_153828012_153828349_153922732
transcript_106473.known	chr4	+	1843	12	FSM	ENSG00000168214.22	ENST00000512671.6	1843	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	488.210529035535	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGTAAAAAAAAAAAAAAAAA	26319532	True	NA	NA	False	NA	NA	NA	26319661	26431181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319771_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106475.known	chr4	+	1992	12	FSM	ENSG00000168214.22	ENST00000342295.6	1992	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	490.833260136473	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	26319506	True	NA	NA	False	NA	NA	NA	26319635	26431186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319889_26320699_26320816_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106480.known	chr4	+	1998	12	FSM	ENSG00000168214.22	ENST00000348160.9	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	361.44734307805	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGTTGTCTCCCTGCAAG	26315289	True	NA	NA	False	NA	NA	NA	26320806	26431136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106482.known	chr4	+	1637	12	FSM	ENSG00000168214.22	ENST00000681025.1	1637	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	547.923201471469	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTCATACCAGGTGAT	26313444	True	NA	NA	False	AAAAAG	-38	NA	26321010	26431104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26412929_26412988_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106486.known	chr4	+	2136	12	FSM	ENSG00000168214.22	ENST00000505958.6	2136	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	436.389184858146	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTCTTTTTGCTAGGACT	26321354	False	NA	NA	False	NA	NA	NA	26321364	26431009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321872_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106489.known	chr4	+	1682	11	FSM	ENSG00000168214.22	ENST00000345843.8	1682	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	410.261136350983	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAAAAATGAACAATCG	26319580	False	NA	NA	False	AAAAAG	-12	NA	26319709	26431066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319889_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_10649.known	chr1	+	1267	3	FSM	ENSG00000284738.2	ENST00000641448.2	1325	3	53	5	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	153923267	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153923963_153928634_153928771_153934735
transcript_106495.known	chr4	+	1678	11	FSM	ENSG00000168214.22	ENST00000509158.6	1678	11	0	0	0	0	multi-exon	TRUE	canonical	2	34	junction_9	503.649520996496	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCCCTGCAAGTGCT	26320373	False	NA	NA	False	NA	NA	NA	26320974	26431140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26430418_26430523_26430691
transcript_10650.known	chr1	+	1254	3	FSM	ENSG00000284738.2	ENST00000641267.1	1254	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATTTATTTGGTCATTA	153923267	True	NA	NA	False	TATAAA	-23	NA	153923336	153935240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153923963_153928634_153928771_153934748
transcript_106503.known	chr4	+	5395	11	FSM	ENSG00000168214.22	ENST00000355476.8	5395	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	274.839389462282	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTCTGTCGAATGTGCCT	26313447	True	NA	21	True	AATAAA	-29	NA	26321013	26434923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106526.known	chr4	+	566	5	FSM	ENSG00000168214.22	ENST00000506956.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	520.172267138493	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCAGCAGCTAAACTTGGA	26319532	True	NA	NA	False	NA	NA	NA	26319661	26415613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26319771_26362445_26362629_26386352_26386392_26406174_26406271_26415474
transcript_106536.nic	chr4	+	476	4	ISM	ENSG00000168214.22	ENST00000510778.7	1198	12	-250	15171	-21	-51	5prime_fragment	FALSE	canonical	3	493	junction_1	354.42096752622	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACAAATGGAACGCGATGG	26319481	False	NA	NA	False	AAGAAA	-7	NA	26320765	26415532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_26321049_26386352_26386392_26406174_26406271_26415474
transcript_106537.known	chr4	+	2169	11	FSM	ENSG00000168214.22	ENST00000681484.1	2169	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	411.415653567046	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGAAATGCAGAAGCC	26321288	False	NA	NA	False	NA	NA	NA	26321298	26431159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321872_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106541.known	chr4	+	1766	13	FSM	ENSG00000168214.22	ENST00000681679.1	1766	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	541.512824306949	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTTGTGGTTTCTTGGGA	26313444	True	NA	NA	False	AAAAAG	-29	NA	26321010	26431083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26321049_26362445_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26422131_26422157_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430418_26430523_26430691
transcript_106542.known	chr4	+	860	2	FSM	ENSG00000168214.22	ENST00000505727.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	1562	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGCCACAGTAAAAAAAAAA	26430104	False	NA	NA	False	NA	NA	NA	26430145	26431174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26430523_26430691
transcript_106543.known	chr4	+	340	4	FSM	ENSG00000168214.22	ENST00000514807.5	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	496.767103938612	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGTAAGATTATTTT	26319502	False	NA	NA	False	NA	NA	NA	26320786	26406263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26320816_26362445_26362629_26386352_26386392_26406174
transcript_106544.known	chr4	+	1682	10	FSM	ENSG00000168214.22	ENST00000504907.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_9	429.757324573638	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGATTTGAAATGCAGAA	NA	False	NA	NA	False	NA	NA	NA	26362435	26431156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26362629_26386352_26386392_26406174_26406271_26415474_26415641_26420550_26420726_26424341_26424480_26424630_26424744_26428719_26428861_26429897_26430054_26430691
transcript_106545.known	chr4	+	2967	21	FSM	ENSG00000109680.11	ENST00000264866.9	2967	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_8	4.50860288781347	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTATAATCCTATGCT	26583617	True	NA	NA	False	AATAAA	-27	NA	26584083	26756223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26584293_26613168_26613242_26614407_26614454_26620612_26620689_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_106551.known	chr4	+	1386	18	FSM	ENSG00000109680.11	ENST00000511789.5	1386	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.2522517681988	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACAGTCACTGGC	26583727	False	NA	NA	False	NA	NA	NA	26584193	26754947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26584293_26637210_26637286_26638770_26638835_26640140_26640188_26659596_26659708_26666332_26666406_26672148_26672188_26673775_26673889_26683674_26683750_26688344_26688408_26717932_26718018_26720080_26720126_26735454_26735488_26739863_26739974_26742507_26742600_26748410_26748527_26753819_26753891_26754872
transcript_106552.nic	chr4	+	442	3	ISM	ENSG00000109680.11	ENST00000515568.1	713	9	-230	48538	-32	-6132	5prime_fragment	FALSE	canonical	3	20	junction_2	2.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGTATTATTATTT	26583585	True	NA	NA	False	AATAAA	-18	NA	26584051	26614535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_26584293_26613168_26613242_26614407
transcript_106553.nic	chr4	+	557	3	NIC	ENSG00000109689.19	novel	407	2	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	26857042	True	NA	9	True	ACTAAA	-19	NA	26857581	26858919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_26857683_26858198_26858348_26858612
transcript_106554.nnic	chr4	+	505	3	NNC	ENSG00000109689.19	novel	407	2	NA	NA	49	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	26857187	True	NA	9	True	ACTAAA	-19	NA	26857726	26858919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_26857776_26858198_26858348_26858612
transcript_106556.known	chr4	+	407	2	FSM	ENSG00000109689.19	ENST00000478425.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGCCCCTGTGATTTGT	26857708	False	NA	9	True	ACTAAA	-19	NA	26858247	26858919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_26858348_26858612
transcript_106557.known	chr4	-	346	2	FSM	ENSG00000240005.6	ENST00000667363.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCCAGCATATTTTT	-26860527	True	NA	3	True	AATAAA	-29	NA	26860632	26859805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_26860029_26860509
transcript_106558.known	chr4	-	514	2	FSM	ENSG00000240005.6	ENST00000663047.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGCCAGCATATTTTT	-26860526	True	NA	3	True	AATAAA	-29	NA	26860631	26859805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_26860029_26860340
transcript_106559.known	chr4	+	6403	2	FSM	ENSG00000169851.15	ENST00000361762.3	6403	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGCCATTGGTTTATTG	30720201	True	NA	NA	False	ATTAAA	-18	NA	30720414	30732973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_30724597_30730752
transcript_106562.known	chr4	+	1507	6	FSM	ENSG00000251129.3	ENST00000665582.2	1513	6	6	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTGATCCTGTTCT	31997214	True	NA	NA	False	AATAAA	-33	NA	31997384	32228543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_31997823_32146052_32146268_32155313_32155407_32157955_32158082_32225023_32225122_32228006
transcript_106565.known	chr4	+	1282	5	FSM	ENSG00000251129.3	ENST00000660373.2	1298	5	0	16	0	-16	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGTATTAATATAATTTT	31997208	True	NA	NA	False	AATAAA	-17	NA	31997378	32228527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_31997823_32155313_32155407_32157955_32158082_32225023_32225122_32228006
transcript_106566.known	chr4	+	947	4	FSM	ENSG00000251129.3	ENST00000513211.2	947	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCGTGCTGTTCTTATTC	31997208	True	NA	NA	False	ATTAAA	-26	NA	31997378	32155833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_31997823_32146052_32146268_32155313_32155407_32155638
transcript_106567.nic	chr4	+	735	3	NIC	ENSG00000251129.3	novel	947	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCGTGCTGTTCTTATTC	31997205	True	NA	NA	False	ATTAAA	-26	NA	31997375	32155833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_31997823_32155313_32155407_32155638
transcript_106568.known	chr4	+	353	1	FSM	ENSG00000239983.1	ENST00000482574.1	353	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTGATCATCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	33968173	33968526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_33968200_33968500
transcript_106569.known	chr4	-	1219	5	FSM	ENSG00000248215.6	ENST00000662117.1	1219	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTCTTTTTCTTATT	-36641808	True	NA	NA	False	AATAAA	-1	NA	36641898	36496127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_36497053_36498426_36498489_36582656_36582731_36615417_36615527_36641849
transcript_106570.known	chr4	-	1196	5	FSM	ENSG00000248215.6	ENST00000510597.6	1196	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCTCTTTTTCTTATT	-36641821	True	NA	NA	False	AATAAA	-1	NA	36641911	36496127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_36497053_36498426_36498489_36582656_36582731_36615453_36615527_36641849
transcript_106575.known	chr4	+	3211	14	FSM	ENSG00000169299.14	ENST00000381967.9	3211	14	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_7	18.5034780034688	166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTCTGCATTTTTTTT	37823471	True	NA	9	True	AAGAAA	-13	NA	37826685	37862937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_37826814_37829963_37830132_37834617_37834725_37837528_37837614_37839847_37839932_37840065_37840260_37844363_37844554_37845632_37845731_37846930_37847112_37847201_37847296_37848521_37848652_37850183_37850374_37855607_37855742_37861509
transcript_10658.known	chr1	-	2631	14	FSM	ENSG00000160741.17	ENST00000368633.2	2631	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	50.7851956250496	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGGTGTGGTTAGTTAT	-153958577	False	18768	0	True	AATAAA	-15	NA	153958612	153947674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153948330_153948457_153948645_153949114_153949385_153951259_153951667_153952017_153952263_153952396_153952447_153952570_153952636_153952804_153952835_153953265_153953370_153953537_153953607_153954254_153954317_153954872_153954990_153955064_153955167_153958344
transcript_106585.known	chr4	+	1987	12	FSM	ENSG00000065882.17	ENST00000446803.6	1987	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	32.4821629373862	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAACAGATACTGCTGCT	37972062	True	NA	NA	False	AAGAAA	-43	NA	37977309	38090065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_37977530_38014508_38014974_38018353_38018444_38020590_38020696_38021585_38021719_38027787_38027880_38035587_38035699_38044361_38044491_38045816_38045904_38049617_38049899_38054198_38054339_38089931
transcript_106586.known	chr4	+	731	1	FSM	ENSG00000250254.2	ENST00000504686.2	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTCATATTCCTCTTTA	NA	False	NA	NA	False	AATAAA	-42	NA	37960397	37961128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_37960400_37961100
transcript_106591.known	chr4	-	2001	4	FSM	ENSG00000231160.11	ENST00000436901.3	2001	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	-38664840	True	NA	NA	False	NA	NA	NA	38664914	38626407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_38628103_38630499_38630582_38635955_38636059_38664793
transcript_106592.nic	chr4	+	1344	10	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	-5	2253	combination_of_known_junctions	FALSE	canonical	3	22	junction_8	10.0639927770882	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAGAAAAGGAAGAGA	38867026	True	NA	-41	True	AAGAAA	-5	NA	38867745	38931536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920_38915074_38922769_38922894_38929241_38929334_38931450
transcript_106594.nic	chr4	+	1148	7	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	-5	-14104	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	8.05708797684788	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTGTGCTGAGGTCA	38867026	True	NA	10	True	ATTAAA	-23	NA	38867745	38915179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591_38908727_38914920
transcript_106596.nic	chr4	+	952	6	NIC	ENSG00000197712.12	novel	4060	15	NA	NA	-5	16994	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	8.82269800004511	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGAATAGCTCATTT	38867026	True	NA	7	True	AATAAA	-21	NA	38867745	38908789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_38867835_38878070_38878427_38891742_38891831_38905521_38905636_38905754_38905862_38908591
transcript_106599.nic	chr4	+	752	3	ISM	ENSG00000197712.12	ENST00000358869.5	4060	15	-40	67135	15	-13191	5prime_fragment	FALSE	canonical	3	4	junction_1	3	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTGATAAGTGTA	38867046	True	NA	7	True	TATAAA	-18	NA	38867765	38878604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_38867835_38868397_38868547_38878070
transcript_106603.known	chr4	+	3288	10	FSM	ENSG00000109790.18	ENST00000381930.8	3288	10	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	37.4505435191072	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAGAAAAGA	NA	False	NA	NA	False	NA	NA	NA	39062439	39116332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39063036_39075964_39076148_39081102_39081240_39081962_39082160_39086514_39086728_39096691_39096879_39103286_39103512_39107568_39107732_39113019_39113233_39115158
transcript_106604.known	chr4	+	909	5	FSM	ENSG00000109790.18	ENST00000515612.1	909	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	58.8955643491087	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAACTAGAATTTTTA	NA	False	NA	NA	False	NA	NA	NA	39103314	39126857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39103512_39107568_39107732_39113019_39113233_39115158_39115331_39126693
transcript_106605.known	chr4	+	2513	14	FSM	ENSG00000157796.18	ENST00000506503.1	2513	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	15.7032390281856	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAATAAAAAGTATAGTA	39181400	True	NA	NA	False	AATAAA	-19	NA	39182547	39219133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217986
transcript_106610.nic	chr4	+	1272	11	ISM	ENSG00000157796.18	ENST00000506503.1	2513	14	-71	3063	-27	151	5prime_fragment	TRUE	canonical	3	35	junction_8	6.31268564083465	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTACTATTTTCTTTAT	39181329	True	NA	NA	False	AATAAA	-18	NA	39182476	39216070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840
transcript_106612.known	chr4	+	4395	37	FSM	ENSG00000157796.18	ENST00000399820.8	4395	37	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	11.4029723220649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTGTGACGTTTTTCTGG	39181381	True	NA	13	True	AATAAA	-14	NA	39182528	39285810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39182564_39185725_39185818_39186538_39186605_39189655_39189782_39194543_39194660_39199477_39199594_39203641_39203723_39205153_39205267_39205562_39205737_39214600_39214672_39215840_39216014_39216095_39216211_39217133_39217241_39217982_39218106_39224883_39225034_39228209_39228358_39228485_39228691_39231796_39231957_39232161_39232273_39234765_39234876_39240276_39240335_39244247_39244389_39244469_39244553_39245368_39245453_39253145_39253293_39253905_39254031_39255847_39255961_39257485_39257555_39266062_39266141_39267994_39268092_39269975_39270101_39272979_39273062_39274807_39274959_39277019_39277144_39278130_39278208_39278538_39278664_39285486
transcript_106613.known	chr4	-	4886	25	FSM	ENSG00000035928.17	ENST00000381897.5	4886	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_12	45.8720291196668	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-39359571	True	NA	-7	True	AATAAA	-19	NA	39366375	39287455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306705_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_106614.known	chr4	-	4870	25	FSM	ENSG00000035928.17	ENST00000349703.7	4870	25	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_12	30.4856238887921	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGTCACGACCCTG	-39359558	True	NA	-7	True	AATAAA	-19	NA	39366362	39287455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39288845_39289847_39290040_39291638_39291853_39295613_39295760_39300020_39300139_39300259_39300415_39302277_39302377_39302499_39302596_39302736_39302875_39303059_39303152_39304813_39304929_39306591_39306702_39308635_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_106618.nic	chr4	-	1743	13	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-60	21516	-60	-2338	5prime_fragment	FALSE	canonical	3	232	junction_1	15.9450009581547	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTCCATCTAAAAAGGAA	NA	False	NA	NA	False	AAAAAG	-6	NA	39366435	39308971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_39309033_39311444_39311550_39312751_39312932_39316914_39317023_39320382_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_106621.nic	chr4	-	1212	9	ISM	ENSG00000035928.17	ENST00000381897.5	4886	25	-60	33004	-60	0	5prime_fragment	FALSE	canonical	3	269	junction_1	9.75961064797157	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAATGCCATTAAA	NA	False	NA	NA	False	TATAAA	-26	NA	39366435	39320459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_106625.known	chr4	-	1255	10	FSM	ENSG00000035928.17	ENST00000418436.5	1255	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	115.043094448328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAGAAAATGCCA	-39359558	True	NA	NA	False	TATAAA	-21	NA	39366362	39320464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39320670_39321286_39321375_39323339_39323418_39326562_39326641_39327523_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39355876_39355998_39366238
transcript_106628.nic	chr4	-	571	5	ISM	ENSG00000035928.17	ENST00000504849.5	873	6	-49	4457	-9	-52	5prime_fragment	FALSE	canonical	3	274	junction_1	10.1242283656583	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATGAAGAAAACACTAAGA	-39359580	True	NA	NA	False	NA	NA	NA	39366384	39327659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_39327757_39342344_39342468_39345400_39345477_39351347_39351477_39366238
transcript_106630.nic	chr4	-	308	2	ISM	ENSG00000035928.17	ENST00000503784.1	504	5	-86	23758	-60	-23758	5prime_fragment	FALSE	canonical	3	285	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAAGGAAATCAAGGT	NA	False	NA	48	True	AAGAAA	-18	NA	39366435	39351365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_39351477_39366238
transcript_106631.known	chr4	-	107	1	FSM	ENSG00000206675.1	ENST00000383948.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGAACAGAACAGAGCCCT	-39297686	False	NA	NA	False	NA	NA	NA	39297711	39297604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39297600_39297700
transcript_106632.known	chr4	+	6002	5	FSM	ENSG00000134962.7	ENST00000257408.5	6002	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTGGTCAATTTTAAGA	NA	False	NA	NA	False	AATAAA	-33	NA	39406929	39451533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39407775_39434209_39434721_39437726_39437996_39446331_39447476_39448300
transcript_106642.known	chr4	-	2420	8	FSM	ENSG00000163682.17	ENST00000645496.2	2420	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_7	2869.57691541269	12021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTGACCACCGTATTAA	-39310807	True	NA	-71	True	NA	NA	NA	39458923	39452586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458599_39458890
transcript_106645.known	chr4	-	662	7	FSM	ENSG00000163682.17	ENST00000508595.6	662	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	3069.86359179398	5437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39310804	True	NA	-30	True	AATAAA	-18	NA	39458920	39454136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458890
transcript_106647.known	chr4	-	724	8	FSM	ENSG00000163682.17	ENST00000295955.14	724	8	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_7	1393.20836597417	178600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTATCCTTTTTAGCTA	-39310806	True	NA	-17	True	AATAAA	-31	NA	39458922	39454123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_106648.known	chr4	-	1127	7	FSM	ENSG00000163682.17	ENST00000449470.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	6213	junction_3	1013.72263629325	12526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39310772	True	NA	-30	True	AATAAA	-18	NA	39458888	39454136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458310_39458393
transcript_106649.known	chr4	-	571	7	FSM	ENSG00000163682.17	ENST00000503040.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3202.3942952457	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCAGGCTGATGAATAAG	-39310799	True	NA	NA	False	AAAAAG	-8	NA	39458915	39454561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454650_39454863_39454930_39456405_39456539_39457585_39457682_39458193_39458310_39458393_39458441_39458890
transcript_106650.known	chr4	-	772	7	FSM	ENSG00000163682.17	ENST00000503277.6	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	4924	junction_6	1464.08078860272	5862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAAACCGGTTATCCTT	-39310778	True	NA	-25	True	AATAAA	-23	NA	39458894	39454131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863_39454945_39456405_39456539_39457585_39457682_39458193_39458441_39458890
transcript_106651.known	chr4	-	619	3	FSM	ENSG00000163682.17	ENST00000511643.6	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	7190	junction_1	830	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCTTAAACCGGTTA	-39307160	False	NA	-30	True	AATAAA	-18	NA	39455276	39454136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39454226_39454532_39454650_39454863
transcript_106658.known	chr4	+	3572	11	FSM	ENSG00000121897.15	ENST00000640888.2	3572	11	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_7	16.6279884532074	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCTCAAAAAAAAAAAAAAAA	39457731	True	NA	NA	False	NA	NA	NA	39459055	39479506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_106663.known	chr4	+	1485	10	FSM	ENSG00000121897.15	ENST00000340169.7	1485	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	36.4796577848363	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	39457784	True	NA	13	True	AATAAA	-45	NA	39459108	39477584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39467517_39467647_39470018_39470165_39471235_39471307_39477062
transcript_106665.known	chr4	+	1578	10	FSM	ENSG00000121897.15	ENST00000381846.2	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	35.1297418924776	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATCTTTGTAAGAAT	39457738	True	NA	10	True	ATTAAA	-25	NA	39459062	39477648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524_39463606_39465045_39465203_39465284_39465343_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_106683.known	chr4	+	1258	8	FSM	ENSG00000121897.15	ENST00000261434.8	1258	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	44.592485868343	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAATAAAAAGGAAAAAAAA	39457762	True	NA	-39	True	NA	NA	NA	39459086	39477532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39467517_39467647_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_106685.known	chr4	+	1159	7	FSM	ENSG00000121897.15	ENST00000638451.1	1159	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.6438302585459	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGGCTTTTAGTGTA	39457784	True	NA	13	True	AATAAA	-45	NA	39459108	39477584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39463524_39463606_39470018_39470165_39471235_39471307_39473099_39473212_39477062
transcript_106690.known	chr4	+	1011	4	FSM	ENSG00000121897.15	ENST00000424936.6	1011	4	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	2.35702260395516	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACAAAAAAAAAGTTTTTAA	39457733	True	NA	NA	False	NA	NA	NA	39459057	39464163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39462195_39462290_39463524
transcript_106691.known	chr4	+	1005	3	FSM	ENSG00000121897.15	ENST00000509519.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	52.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGAGGATCACTTGAGC	39457720	True	NA	NA	False	NA	NA	NA	39459044	39464238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39459163_39460789_39460963_39463524
transcript_106693.known	chr4	-	3037	12	FSM	ENSG00000109814.12	ENST00000316423.11	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_9	82.238315254313	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGTGTAATTTTTGTCA	-39511205	True	NA	0	True	AATAAA	-21	NA	39527439	39498754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39521350_39521520_39527282
transcript_106699.known	chr4	-	1712	11	FSM	ENSG00000109814.12	ENST00000507089.5	1712	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	254.578082324461	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGGCACCCGCCACAGT	-39511205	True	NA	NA	False	NA	NA	NA	39527439	39499910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39510660_39510862_39514082_39514185_39527282
transcript_106701.known	chr4	-	2826	11	FSM	ENSG00000109814.12	ENST00000501493.6	2826	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	259.795708201656	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAACTATATGGGTGTAAT	-39511203	True	NA	-8	True	AATAAA	-13	NA	39527437	39498762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39500254_39503874_39503986_39504416_39504509_39505236_39505371_39505617_39505749_39508565_39508661_39509759_39509908_39510352_39510551_39514082_39514185_39521350_39521520_39527282
transcript_106736.nnic	chr4	+	486	4	NNC	ENSG00000255458.8	novel	2615	4	NA	NA	-196	86	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.49691252107735	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCGGCTAAGTTTTGTAT	39638775	False	NA	NA	False	NA	NA	NA	39638910	39651400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_39639085_39641693_39641793_39650376_39650455_39651265
transcript_106737.known	chr4	+	2585	4	FSM	ENSG00000255458.8	ENST00000666863.1	2585	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.02768199119819	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTGAGATCTTTGCATTT	39639009	True	NA	-12	True	AATAAA	-3	NA	39639139	39653514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39639295_39641689_39641793_39650376_39650455_39651265
transcript_106738.nic	chr4	+	534	3	FSM	ENSG00000255458.8	ENST00000693190.1	393	3	-141	0	-108	0	multi-exon	FALSE	canonical	2	7	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTATTTTTTGCCTGG	39638863	False	NA	NA	False	AATAAA	-24	NA	39638998	39650515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39639295_39641693_39641793_39650376
transcript_106739.known	chr4	+	2155	3	FSM	ENSG00000255458.8	ENST00000659162.1	2155	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTGAACCAACATGT	39639009	True	NA	NA	False	NA	NA	NA	39639139	39653166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39639295_39641693_39641793_39651265
transcript_106744.known	chr4	+	2262	7	FSM	ENSG00000078140.14	ENST00000438068.6	2262	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	410.814502611039	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTGTAATGTTAAAG	39664873	True	NA	6	True	AATAAA	-14	NA	39698138	39779992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698303_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_106749.known	chr4	+	871	6	FSM	ENSG00000078140.14	ENST00000513231.5	871	6	0	0	0	0	multi-exon	FALSE	canonical	2	184	junction_1	280.993665409027	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAACGTCTGTGTAAATT	39664873	True	NA	-5	True	AATAAA	-5	NA	39698138	39778607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_106752.known	chr4	+	891	5	FSM	ENSG00000078140.14	ENST00000503368.5	891	5	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	378.234963349503	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTAGTGTTTAGCAGTGT	39664897	True	NA	98	True	AAGAAA	-7	NA	39698162	39778710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_106755.known	chr4	+	566	4	FSM	ENSG00000078140.14	ENST00000510719.1	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	425.697858423867	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAATACTTTAATTTTT	39697888	False	NA	21	True	AATAAA	-31	NA	39698327	39778633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39774833_39774934_39777681_39777811_39778359
transcript_106759.known	chr4	+	5153	7	FSM	ENSG00000078140.14	ENST00000261427.10	5153	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	326.865245764809	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTATATCTTATTTCTG	39664870	True	NA	29	True	AATAAA	-25	NA	39698135	39782792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39777681_39777811_39778359
transcript_106760.known	chr4	+	2175	6	FSM	ENSG00000078140.14	ENST00000445950.2	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.519769223246	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTATTAAATATATTGTA	39664910	True	NA	-3	True	AATAAA	-5	NA	39698175	39779983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_39698391_39737419_39737514_39745751_39745811_39755656_39755740_39774833_39774934_39778359
transcript_106762.known	chr4	-	2685	16	FSM	ENSG00000121892.15	ENST00000503396.5	2685	16	0	0	0	0	multi-exon	TRUE	canonical	3	333	junction_12	40.0303218406581	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATCTGGTTTCATTTACA	-39977196	True	NA	-1	True	AATAAA	-22	NA	39977956	39898013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_39898529_39898776_39898826_39900425_39900508_39902346_39902461_39904039_39904192_39908394_39908541_39910243_39910339_39913610_39913727_39917047_39917189_39920318_39920400_39922621_39922749_39925835_39925934_39926774_39926862_39927960_39928165_39976439_39976618_39977456
transcript_106771.known	chr4	+	9720	18	FSM	ENSG00000078177.14	ENST00000261435.11	9720	18	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	25.7281502689753	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGTGTGAGGAAATCCT	40051149	True	NA	6	True	AATAAA	-15	NA	40056849	40158252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40057031_40073454_40073552_40097226_40097570_40102074_40103219_40106899_40107025_40112083_40112173_40113431_40113509_40117868_40118025_40119931_40122310_40123126_40123213_40124159_40124206_40126133_40126331_40131800_40131920_40136943_40137083_40142672_40142862_40144631_40144801_40152779_40152904_40154191
transcript_106772.known	chr4	+	1157	1	FSM	ENSG00000260296.1	ENST00000567102.1	1157	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGACTCATCTAACTAGAG	NA	False	NA	6	True	AATAAA	-16	NA	40166674	40167831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40166700_40167800
transcript_106773.known	chr4	+	4181	3	FSM	ENSG00000168421.13	ENST00000381799.10	4181	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCGGGTAGTTCATTCTT	40196766	True	NA	NA	False	ATTAAA	-35	NA	40197030	40246967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40197301_40242713_40242835_40243177
transcript_10678.known	chr1	+	1749	10	FSM	ENSG00000143578.16	ENST00000368607.8	1749	10	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	43.2155093330344	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966374	True	NA	15	True	AATAAA	-15	NA	153967901	153974359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968165_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_106781.known	chr4	-	2118	2	FSM	ENSG00000163694.15	ENST00000513044.1	2118	2	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	-40629515	False	NA	NA	False	NA	NA	NA	40629529	40542522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_40544507_40629395
transcript_106783.known	chr4	-	1681	7	FSM	ENSG00000163697.17	ENST00000502841.5	1681	7	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_6	46.4351399504968	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATGCATTTTGGGTGGGA	-40854841	True	NA	-28	True	AATAAA	-4	NA	40857155	40815332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40856984
transcript_106784.nic	chr4	-	1691	7	NIC	ENSG00000163697.17	novel	2964	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	65.7184651880023	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTCAAACTTCTGCCT	-40854872	True	NA	-8	True	AATAAA	-24	NA	40857186	40815312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_106786.nic	chr4	-	1614	7	NIC	ENSG00000163697.17	novel	1681	7	NA	NA	6	-57	combination_of_known_junctions	FALSE	canonical	3	44	junction_6	65.7184651880023	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTCTTTTCCGATGGTT	-40854872	True	NA	-13	True	ATTAAA	-16	NA	40857186	40815389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_40816260_40821870_40822051_40823643_40823760_40825886_40825971_40827131_40827220_40830462_40830578_40857025
transcript_106802.known	chr4	+	1759	6	FSM	ENSG00000179299.17	ENST00000473399.5	1759	6	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_4	19.8131269616888	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTAGTTTAAATTCA	40746774	True	NA	NA	False	AATAAA	-7	NA	40749963	40775456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766
transcript_106809.nic	chr4	+	1229	3	ISM	ENSG00000179299.17	ENST00000473399.5	1759	6	-61	14581	-22	-14581	5prime_fragment	FALSE	canonical	3	177	junction_2	6	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTTAAATAGTTT	40749842	True	NA	NA	False	NA	NA	NA	40749902	40760875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_40750301_40750602_40750992_40760433
transcript_106810.known	chr4	+	3546	11	FSM	ENSG00000179299.17	ENST00000316607.5	3546	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	62.6277893590377	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATATCTTATTATTTAA	40746735	True	NA	7	True	ATTAAA	-17	NA	40749924	40809985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_40750301_40750602_40750992_40760433_40760493_40761170_40761302_40774264_40774418_40774766_40774951_40776048_40776260_40790601_40790746_40794374_40794477_40798786_40798905_40808306
transcript_106811.known	chr4	+	917	10	FSM	ENSG00000154277.13	ENST00000503431.5	917	10	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_1	793.878353090807	4349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCATTGTGGTGTGAGC	NA	False	NA	NA	False	NA	NA	NA	41256768	41268256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41256804_41256949_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_106817.known	chr4	+	1119	8	FSM	ENSG00000154277.13	ENST00000512419.5	1119	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	903.930623127998	21285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTCTCCTCAATATGTCA	41256559	False	NA	55	True	NA	NA	NA	41256910	41268455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257021_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_106837.known	chr4	-	451	2	FSM	ENSG00000251173.1	ENST00000510073.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTAGGTGACGATTAC	-41256678	True	NA	NA	False	AATAAA	-17	NA	41256721	41253882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_41254171_41256558
transcript_106840.known	chr4	+	748	9	FSM	ENSG00000154277.13	ENST00000505232.5	748	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	840.675165789379	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTTCAACATGAAAATAT	41211747	True	NA	NA	False	NA	NA	NA	41256931	41268108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263228_41263292_41264102_41264162_41267986
transcript_106841.known	chr4	+	827	8	FSM	ENSG00000154277.13	ENST00000508768.5	827	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	882.142267206281	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCACAGCTGTCCACTGG	41256847	True	NA	NA	False	NA	NA	NA	41256939	41268239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41263224_41263292_41264102_41264162_41267986
transcript_106842.known	chr4	+	785	9	FSM	ENSG00000154277.13	ENST00000512788.1	785	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	837.93748834564	3463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATACCCCCCCATGCAGT	41256852	False	NA	NA	False	NA	NA	NA	41256944	41268125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41257010_41257114_41257127_41257608_41257738_41260646_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264191_41267986
transcript_106843.known	chr4	+	862	6	FSM	ENSG00000154277.13	ENST00000514764.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	3	2464	junction_4	65.5908530208291	2218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCTGATTCTCATTT	41260619	False	NA	29	True	AATAAA	-21	NA	41260638	41268429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41260798_41261714_41261801_41261875_41261924_41263224_41263292_41264102_41264162_41267986
transcript_106848.known	chr4	+	1092	8	FSM	ENSG00000109133.13	ENST00000513702.5	1092	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	88.3862118714203	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGTGTTGCTAATGGTTA	NA	False	NA	57	True	AAAAAG	-20	NA	41935128	41954395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935263_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_106852.known	chr4	+	867	8	FSM	ENSG00000109133.13	ENST00000508448.5	867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.201895287568	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCCACTGTTTGTGAGA	NA	False	NA	NA	False	AATGAA	-38	NA	41935128	41954122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935311_41935466_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_106855.nic	chr4	+	1241	7	NIC	ENSG00000109133.13	novel	7404	7	NA	NA	-9	0	intron_retention	FALSE	canonical	3	3	junction_6	120.046403065185	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTTTTTCCTTGTGTT	NA	False	NA	5	True	AATAAA	-17	NA	41935119	41954021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41953759
transcript_106856.known	chr4	+	7404	7	FSM	ENSG00000109133.13	ENST00000504986.6	7404	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	25.1440295541948	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGATTCTGTACT	41935393	False	NA	19	True	AAAAAG	-29	NA	41935428	41960803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41935530_41938601_41938697_41939195_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41954069
transcript_106863.known	chr4	+	677	5	FSM	ENSG00000109133.13	ENST00000513558.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_4	132.73540409401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGCTTTTTCCTTGTGTT	41939239	False	NA	5	True	AATAAA	-17	NA	41939254	41954021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41939384_41943746_41943815_41944792_41944927_41949301_41949386_41953759
transcript_106864.known	chr4	+	2217	19	FSM	ENSG00000014824.14	ENST00000513699.5	2217	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.942571143777	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACATTTTGGTTATTTA	41975759	True	NA	NA	False	NA	NA	NA	41990501	42086369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42018388_42018506_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_106868.known	chr4	+	6164	18	FSM	ENSG00000014824.14	ENST00000264451.12	6164	18	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_17	58.8896686999067	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTAGTTTGGGATTTTT	41975787	True	NA	NA	False	AATAAA	-27	NA	41990529	42090461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211_42078326_42086081
transcript_10687.known	chr1	+	1750	10	FSM	ENSG00000143578.16	ENST00000271889.8	1750	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	44.1246830506576	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATCCCAGAAGTTTGAA	153966393	True	NA	15	True	AATAAA	-15	NA	153967920	153974359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968185_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_106870.nic	chr4	+	2352	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	11610	-14	0	5prime_fragment	FALSE	canonical	3	556	junction_9	49.0735656311012	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACATTTGAATTCTGT	41975745	True	NA	-35	True	TTTAAA	-28	NA	41990487	42078851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_106871.nic	chr4	+	2410	17	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	11552	-14	58	5prime_fragment	FALSE	canonical	3	556	junction_9	49.0735656311012	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATTTGTTGAAGGCAGT	41975745	True	NA	23	True	AATAAA	-25	NA	41990487	42078909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190_42060247_42062985_42063122_42065309_42065350_42066549_42066622_42067084_42067193_42070525_42070692_42075656_42075787_42078211
transcript_10688.known	chr1	+	1496	10	FSM	ENSG00000143578.16	ENST00000368600.7	1496	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	54.2361093327642	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCCCAGAAGTTTGAAAT	153967971	True	NA	17	True	AATAAA	-17	NA	153968242	153974361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968311_153968521_153968640_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_106881.nic	chr4	+	1340	10	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	29935	-14	-18325	5prime_fragment	FALSE	canonical	3	556	junction_9	55.6995910617344	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTGTTTTATTTGGTC	41975745	True	NA	7	True	AATAAA	-19	NA	41990487	42060526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274_42035334_42038985_42039054_42049376_42049480_42060190
transcript_106884.nic	chr4	+	795	7	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	55166	-14	14520	5prime_fragment	FALSE	canonical	3	566	junction_5	56.1387170814898	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAGAGAATACAGAGAT	41975745	True	NA	NA	False	NA	NA	NA	41990487	42035295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301_42023385_42035274
transcript_106885.nic	chr4	+	775	6	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	67076	-14	2610	5prime_fragment	FALSE	canonical	3	566	junction_5	57.5339899537656	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTATATTCAATTTAAAG	41975745	True	NA	NA	False	AATACA	-8	NA	41990487	42023385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837_42022931_42023301
transcript_106887.nic	chr4	+	1033	5	ISM	ENSG00000014824.14	ENST00000264451.12	6164	18	-42	67189	-14	2497	5prime_fragment	FALSE	canonical	3	605	junction_4	47.6995807109455	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGGTGACCATGTGTG	41975745	True	NA	NA	False	AATAAA	-16	NA	41990487	42023272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_41990761_42001615_42001781_42018110_42018171_42020415_42020516_42022837
transcript_106891.known	chr4	-	8692	6	FSM	ENSG00000188848.17	ENST00000504360.5	8692	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	36.6856920338161	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTTAACTTGGTTTT	NA	False	NA	-16	True	AATAAA	-16	NA	42152878	42110939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_42117736_42120124_42120295_42125582_42125675_42143427_42143995_42151656_42152377_42152531
transcript_106892.nnic	chr4	-	1117	2	FSM	ENSG00000289643.1	ENST00000685812.1	1117	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTTCTGGTCTATGTTT	-42291912	True	NA	-5	True	ATTAAA	-14	NA	42292644	42285822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_42286402_42292106
transcript_106893.known	chr4	+	2322	2	FSM	ENSG00000178343.5	ENST00000319234.5	2322	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTTAATGTGATTC	42397361	True	NA	13	True	AATAAA	-30	NA	42397487	42402487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_42398334_42401011
transcript_106896.known	chr4	+	390	1	FSM	ENSG00000124399.4	ENST00000513465.1	390	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGGCAATGATGACTATA	NA	False	NA	NA	False	NA	NA	NA	43898961	43899351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_43899000_43899400
transcript_106903.known	chr4	-	2235	7	FSM	ENSG00000163281.12	ENST00000295448.8	2235	7	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_5	8.02080627701064	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCCTTATAAATGTTTTT	-44725566	True	NA	NA	False	NA	NA	NA	44726556	44701794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_106907.nnic	chr4	-	1132	7	NNC	ENSG00000163281.12	novel	5382	6	NA	NA	-53	9169	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	16.4485730553004	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGCATGTTTGTTAAAC	-44725651	True	NA	NA	False	AATAAA	-18	NA	44726641	44692625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_44692786_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_10691.known	chr1	+	1557	10	FSM	ENSG00000143578.16	ENST00000368603.5	1557	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	49.3986054683958	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGTATCCCAGAAGTTT	153967965	True	NA	12	True	AATAAA	-12	NA	153968236	153974356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153968311_153968521_153968700_153968929_153969177_153969333_153969456_153972743_153972837_153972971_153973079_153973194_153973264_153973379_153973465_153973619_153973717_153973871
transcript_106914.known	chr4	-	1050	6	FSM	ENSG00000163281.12	ENST00000507534.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	19.6102014268084	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGAGTGTCCACATCAGG	-44725533	True	NA	NA	False	TATAAA	-42	NA	44726523	44702787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_44703143_44707751_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44726473
transcript_106915.known	chr4	-	5382	6	FSM	ENSG00000163281.12	ENST00000509756.1	5382	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.28009661779378	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGCTTACTGTGTCTT	-44725555	True	NA	NA	False	AATAAA	-25	NA	44726545	44703245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_44707927_44710952_44711138_44717112_44717296_44718308_44718411_44722083_44722243_44726473
transcript_106926.known	chr4	-	487	2	FSM	ENSG00000109158.11	ENST00000509316.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCGCCTCCACCCGTACTT	-46993531	True	NA	NA	False	NA	NA	NA	46993548	46992669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_46992947_46993338
transcript_106927.known	chr4	+	1939	9	FSM	ENSG00000163288.14	ENST00000295454.8	1939	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.330718913883074	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CATAAAAAAAAACACACAAT	47031549	True	NA	NA	False	NA	NA	NA	47031566	47426447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47031732_47031913_47032006_47032416_47032485_47161248_47161470_47320126_47320210_47403317_47403456_47403558_47403712_47406681_47406927_47425673
transcript_106931.known	chr4	-	1461	5	FSM	ENSG00000169019.11	ENST00000381571.6	1461	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	8.16624148553054	489	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTTGTTTTATTTTTAT	-47462599	True	NA	72	True	AATGAA	-3	NA	47463702	47450786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47451666_47453058_47453215_47456576_47456730_47460143_47460300_47463585
transcript_106933.nnic	chr4	+	1105	2	NNC	ENSG00000145246.14	novel	566	2	NA	NA	2	-25600	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATAGAATCTCATTTATT	47484724	True	NA	NA	False	NA	NA	NA	47485276	47487246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_47485520_47486384
transcript_106934.known	chr4	+	616	1	FSM	ENSG00000242262.1	ENST00000487352.1	616	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	151	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAAGTAAAGTTTGTAAAA	NA	False	NA	-41	True	NA	NA	NA	47706371	47706987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_47706400_47707000
transcript_106937.known	chr4	+	5302	6	FSM	ENSG00000163293.12	ENST00000295461.10	5302	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	2.41660919471891	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGAGTTCAGTTTTTAG	48016249	True	NA	8	True	AATAAA	-17	NA	48016771	48040173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48016886_48025067_48025335_48030119_48030177_48032992_48033084_48034880_48035042_48035561
transcript_106945.nic	chr4	+	315	2	ISM	ENSG00000163293.12	ENST00000511852.5	884	5	-60	10638	-22	52	5prime_fragment	FALSE	canonical	3	29	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCTCAAGTATTTTTAT	48016227	True	NA	NA	False	AATACA	-27	NA	48016749	48025246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_48016886_48025067
transcript_106946.known	chr4	+	708	6	FSM	ENSG00000163293.12	ENST00000508180.1	708	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.45304183847718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTGGCTCCCAAGAAAG	48016249	True	NA	NA	False	NA	NA	NA	48016771	48035613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48016852_48025067_48025335_48030119_48030177_48032992_48033084_48034880_48035042_48035561
transcript_106948.known	chr4	-	3880	23	FSM	ENSG00000170448.12	ENST00000507489.2	3880	23	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	26.6614836560871	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTAATCTAGAATATTTA	-47911084	True	NA	0	True	ATTAAA	-16	NA	47914583	47847239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914364
transcript_106949.known	chr4	-	2664	23	FSM	ENSG00000170448.12	ENST00000507131.5	2664	23	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_22	16.6921568161084	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCGTCGGAAGAAGAACAG	-47911117	True	NA	NA	False	AAAACA	-9	NA	47914616	47848303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914549
transcript_106950.known	chr4	-	3723	23	FSM	ENSG00000170448.12	ENST00000329043.7	3723	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_22	27.0246291096177	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAATATTTATTATTAG	-47914657	False	NA	7	True	ATTAAA	-23	NA	47914667	47847232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47848337_47851094_47851149_47851855_47851943_47855058_47855164_47862845_47862916_47875126_47875294_47878524_47878666_47879095_47879118_47884345_47884438_47885497_47885658_47885878_47886000_47890612_47890704_47894179_47894303_47896522_47896648_47897966_47898082_47898756_47898858_47898958_47899121_47899369_47899549_47903192_47903324_47905236_47905347_47910823_47910995_47913968_47914206_47914612
transcript_106956.known	chr4	-	2926	11	FSM	ENSG00000198515.16	ENST00000514170.7	2926	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.79463772249642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGTGAAAATGAGTTAT	-48016434	True	NA	NA	False	AATAAA	-19	NA	48016681	47935976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47937830_47940762_47940870_47942040_47942149_47943180_47943289_47943370_47943413_47949832_47949896_47951352_47951470_47952582_47952704_47981392_47981501_48010793_48010894_48016482
transcript_106959.known	chr4	-	589	5	FSM	ENSG00000198515.16	ENST00000513178.2	589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.69966214673719	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTAAGTATATTTACAATA	-48016425	True	NA	NA	False	NA	NA	NA	48016672	47949834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_47949896_47951352_47951470_47952582_47952704_48010793_48010894_48016482
transcript_106961.nnic	chr4	-	1086	4	NNC	ENSG00000198515.16	novel	2926	11	NA	NA	-28	-30443	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTACATTTTGACTTT	-48016462	True	NA	NA	False	AATAAA	-18	NA	48016709	47980277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_47980918_47981381_47981501_48010793_48010894_48016482
transcript_106964.nnic	chr4	-	573	3	NNC	ENSG00000198515.16	novel	2926	11	NA	NA	-28	-52569	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	3	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGGTCTGTCTTTAC	-48016462	True	NA	-1	True	ATTAAA	-15	NA	48016709	48002403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_48002650_48010793_48010894_48016482
transcript_106965.nic	chr4	-	888	2	ISM	ENSG00000198515.16	ENST00000513178.2	589	5	-37	60398	-28	-60398	5prime_fragment	FALSE	canonical	3	9	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGATTTCTATAATTTT	-48016462	True	NA	NA	False	AATAAA	-43	NA	48016709	48010232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_48010894_48016482
transcript_106967.known	chr4	-	3661	18	FSM	ENSG00000135605.13	ENST00000381501.8	3661	18	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_2	12.9090510346778	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAATCTGCCACATTCCT	-48268889	True	NA	-4	True	AGTAAA	-20	NA	48269838	48135782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48137500_48138664_48138823_48138903_48139023_48141354_48141420_48145078_48145296_48145407_48145580_48146324_48146400_48149556_48149691_48150862_48150943_48156679_48156735_48163701_48163768_48167777_48167954_48168585_48168627_48170247_48170377_48171367_48171450_48176081_48176187_48228476_48228660_48269751
transcript_106971.known	chr4	-	11692	64	FSM	ENSG00000075539.15	ENST00000358350.9	11692	64	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_51	13.9948880275803	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGCAAACAAATTCATTAG	-48777306	True	NA	2	True	AATAAA	-25	NA	48780279	48497356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48499681_48500029_48500221_48501622_48501734_48502827_48502846_48505546_48505616_48510058_48510158_48510834_48510985_48512480_48512689_48515027_48515276_48521047_48521216_48522900_48523105_48527476_48527654_48527970_48528046_48528174_48528337_48531155_48531354_48534544_48534686_48535656_48535828_48539970_48540069_48540352_48540961_48542026_48542122_48543806_48543998_48544782_48544905_48546066_48546272_48547583_48547770_48548689_48548794_48549472_48549624_48550591_48550705_48551493_48551579_48553214_48553384_48556977_48557119_48557452_48557713_48561467_48561637_48562888_48562989_48563947_48564103_48564932_48565044_48565530_48565692_48567247_48567421_48570826_48570919_48573185_48573244_48575116_48575242_48576029_48576223_48578972_48579242_48580864_48580952_48581419_48581606_48582496_48582735_48586620_48586729_48589744_48589878_48590658_48590831_48593929_48594017_48595589_48595699_48595896_48596001_48602019_48602122_48603289_48603389_48605740_48605834_48606437_48606607_48608986_48609068_48609743_48609824_48619273_48619371_48620638_48620779_48623125_48623180_48634290_48634491_48684672_48684796_48710518_48710699_48780077
transcript_106972.known	chr4	-	441	3	FSM	ENSG00000075539.15	ENST00000502520.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	13	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATCATGTCAAACATTA	NA	False	NA	NA	False	AATAAA	-45	NA	48780322	48634417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48634491_48684672_48684796_48780077
transcript_106973.known	chr4	-	443	3	FSM	ENSG00000075539.15	ENST00000505437.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATCATGTCAAACATTA	-48777294	True	NA	NA	False	AATAAA	-45	NA	48780267	48634417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48634491_48710518_48710699_48780077
transcript_106989.known	chr4	+	1288	9	FSM	ENSG00000109180.15	ENST00000513391.2	1288	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	307.305222864825	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCATCTTCCTTGATTT	48830790	True	NA	17	True	AATAAA	-21	NA	48831341	48861250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831399_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_106991.known	chr4	+	1423	9	FSM	ENSG00000109180.15	ENST00000508293.5	1423	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	308.58750784826	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATGGCAAATAAAATGTAA	48831011	False	NA	-17	True	ATTAAA	-41	NA	48831305	48861216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831532_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_107010.known	chr4	+	1958	9	FSM	ENSG00000109180.15	ENST00000264312.12	1958	9	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	96.623544620346	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGACTGATATTATGTTA	48816422	True	NA	NA	False	AATAAA	-17	NA	48831087	48861815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_107011.known	chr4	+	1306	8	FSM	ENSG00000109180.15	ENST00000396448.6	1306	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	320.051653994304	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCCTCATCTTCCTTGAT	48816399	True	NA	15	True	AATAAA	-19	NA	48831064	48861248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48852021_48860724
transcript_107012.known	chr4	+	1594	9	FSM	ENSG00000109180.15	ENST00000381473.7	1594	9	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	267.11596264544	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTATCTTAATGTTTAT	48816418	True	NA	28	True	ATTAAA	-25	NA	48831083	48861200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831497_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_107013.known	chr4	+	688	7	FSM	ENSG00000109180.15	ENST00000511102.5	688	7	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	101.062137101664	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGGTATTACTGATCAT	48816418	True	NA	NA	False	AATGAA	-8	NA	48831083	48851945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831250_48832619_48832683_48833400_48833482_48842635_48842690_48848398_48848447_48849946_48850083_48851805
transcript_107014.known	chr4	+	1916	2	FSM	ENSG00000109180.15	ENST00000502972.1	1916	2	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCCTCATCTTCCTTG	48855961	False	NA	13	True	AATAAA	-17	NA	48855971	48861246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48857366_48860724
transcript_107015.known	chr4	+	1204	8	FSM	ENSG00000109180.15	ENST00000509122.5	1204	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	400.41850555617	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCATCTTCCTTGATT	48830976	False	NA	16	True	AATAAA	-20	NA	48830997	48861249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_48831053_48832619_48832683_48842635_48842690_48848398_48848447_48849946_48850083_48851805_48851976_48857212_48857366_48860724
transcript_107022.known	chr4	-	611	6	FSM	ENSG00000145247.12	ENST00000381464.6	611	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1343.82379797353	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTTCTAATGGAACAA	-48881297	True	NA	NA	False	TTTAAA	-23	NA	48906757	48885404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904635_48906657
transcript_107024.known	chr4	-	636	6	FSM	ENSG00000145247.12	ENST00000273860.8	636	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	1093.20563481899	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACATTGTGTCTGTCA	-48881328	True	NA	NA	False	AATAAA	-16	NA	48906788	48885387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48894005_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_107025.known	chr4	-	812	6	FSM	ENSG00000145247.12	ENST00000508069.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_4	1036.43261237767	2513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-48906921	False	NA	NA	False	AATAAA	-22	NA	48906937	48885381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48892771_48892890_48894005_48894054_48897803_48897858_48904483_48904612_48906657
transcript_107026.known	chr4	-	459	4	FSM	ENSG00000145247.12	ENST00000506226.6	459	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	1387.74789577294	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTCTAATGGAACAAAAACA	-48881314	True	NA	NA	False	AATAAA	-4	NA	48906774	48885399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48894005_48894054_48904483_48904612_48906657
transcript_107027.known	chr4	-	1886	6	FSM	ENSG00000145247.12	ENST00000514576.5	1886	6	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_4	159.940488932603	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTCTGTCACTCACT	-48881338	True	NA	NA	False	AATAAA	-22	NA	48906798	48885381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_48885566_48892771_48894054_48897803_48897858_48899828_48899926_48904483_48904612_48906657
transcript_107030.known	chr4	+	4840	12	FSM	ENSG00000109184.15	ENST00000477560.5	4840	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	118.990797616267	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51840218	True	NA	11	True	AATAAA	-25	NA	51843196	51916837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51887245_51891759_51891852_51899269_51899379_51908919_51908976_51911069_51911175_51913289_51913393_51913528
transcript_107031.known	chr4	+	1584	12	FSM	ENSG00000109184.15	ENST00000507741.5	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	107.334496853882	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTAACCTTACTGTTTA	51840174	True	NA	NA	False	AAAACA	-33	NA	51843152	51914036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51848204_51848368_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_107035.known	chr4	+	4222	11	FSM	ENSG00000109184.15	ENST00000334635.10	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_8	47.7246267664819	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51840174	True	NA	11	True	AATAAA	-25	NA	51843152	51916837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51911069_51911175_51913289_51913393_51913528
transcript_107042.known	chr4	+	4207	10	FSM	ENSG00000109184.15	ENST00000381441.7	4207	10	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	65.0585681055971	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGTAAATTTTTTCT	51843036	False	NA	11	True	AATAAA	-25	NA	51843062	51916837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762_51877855_51886567_51886639_51891759_51891852_51899269_51899379_51913289_51913393_51913528
transcript_107052.known	chr4	+	643	5	FSM	ENSG00000109184.15	ENST00000511675.5	643	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	28.8877136513086	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTTAGAGGGAGAGAGG	51843034	False	NA	NA	False	TTTAAA	-41	NA	51843060	51877972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_51843268_51863436_51863508_51863669_51863710_51874270_51874386_51877762
transcript_107060.nic	chr4	-	1359	7	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	-4	-2990	combination_of_known_junctions	FALSE	canonical	3	20	junction_4	277.824684928383	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-52032504	True	NA	-1	True	AATAAA	-20	NA	52038303	52023695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52031864_52031962_52033430_52033641_52038226
transcript_107070.known	chr4	-	4248	6	FSM	ENSG00000163069.13	ENST00000381431.10	4248	6	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_4	65.6493716649291	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTTAATTTTTTAAG	-52032500	True	NA	-16	True	AATAAA	-15	NA	52038299	52020705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52033430_52033641_52038226
transcript_107077.nnic	chr4	-	1051	5	NIC	ENSG00000163069.13	novel	4248	6	NA	NA	-3	-2990	combination_of_known_splicesites	FALSE	canonical	3	25	junction_4	273.796457245159	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGTTTTTAAAATTCCA	-52032503	True	NA	-1	True	AATAAA	-20	NA	52038302	52023695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_52024161_52027967_52028100_52028729_52028922_52029677_52029864_52038226
transcript_107083.nic	chr4	-	760	3	ISM	ENSG00000163069.13	ENST00000506357.5	663	5	-58	2718	-4	-2660	5prime_fragment	FALSE	canonical	3	75	junction_1	239.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAGGAACAATTAAGAA	-52032504	True	NA	NA	False	GATAAA	-34	NA	52038303	52031488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_52031962_52033430_52033641_52038226
transcript_107089.known	chr4	-	7932	9	FSM	ENSG00000109189.13	ENST00000441222.8	7932	9	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_1	18.5434456075455	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCAGTATATTGTTCT	-52655577	True	NA	3	True	AATAAA	-27	NA	52659301	52590959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52597742_52598627_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52659114
transcript_107094.known	chr4	-	1589	10	FSM	ENSG00000109189.13	ENST00000514536.5	1589	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	74.3133173516192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTATTTCAGTCTGAC	-52655574	True	NA	NA	False	NA	NA	NA	52659298	52597466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52597742_52598568_52598707_52601856_52602055_52604500_52604585_52610540_52610618_52626017_52626248_52627949_52628164_52631063_52631145_52658173_52658282_52659114
transcript_107095.nic	chr4	-	622	4	ISM	ENSG00000109189.13	ENST00000441222.8	7932	9	-20	35168	-20	0	5prime_fragment	FALSE	canonical	3	151	junction_2	5.43650214343336	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCAACATGAACGAACCT	-52659310	False	NA	NA	False	ATTAAA	-3	NA	52659321	52626127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_52626248_52627949_52628164_52631063_52631145_52659114
transcript_107096.known	chr4	+	2609	11	FSM	ENSG00000250302.3	ENST00000650700.1	2609	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	516.970057159987	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTTGAAAAAGAGCAGAT	52692806	True	NA	15	True	AATAAA	-3	NA	52712393	52866821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52759377_52759457_52779076_52779251_52789678_52789800_52792048_52792195_52799578_52799673_52816450_52816555_52863267_52863325_52864477_52864555_52865334
transcript_107098.nnic	chr4	-	723	2	Antisense	novelGene_ENSG00000250302.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCAGTCATCTAATTTG	-52861937	True	NA	-1	True	AATAAA	-19	NA	52862217	52861142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_52861732_52862083
transcript_107100.known	chr4	+	870	6	FSM	ENSG00000226950.8	ENST00000444958.2	870	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1275.67293613998	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	52692913	True	NA	NA	False	NA	NA	NA	52712500	52721683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867_52720372_52721569
transcript_107103.known	chr4	+	2115	5	FSM	ENSG00000226950.8	ENST00000675590.1	2115	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1312.745096163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTCAATACATAGTGTCA	52692866	True	NA	NA	False	NA	NA	NA	52712453	52721683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713543_52714198_52714239_52719867
transcript_107107.known	chr4	+	1644	5	FSM	ENSG00000226950.8	ENST00000675988.1	1644	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1283.51945349496	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATAGGAAAATGATATAT	52692916	True	NA	NA	False	AATAAA	-20	NA	52712503	52721102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493_52713703_52714198_52714239_52719867
transcript_107109.known	chr4	+	3959	4	FSM	ENSG00000226950.8	ENST00000676450.1	3959	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	821.190328459582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGACAGAGCTATACTA	52692913	True	NA	NA	False	NA	NA	NA	52712500	52723623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52714198_52714239_52719867
transcript_107112.known	chr4	+	987	3	FSM	ENSG00000226950.8	ENST00000411630.7	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	713.5	12050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCTCTTGTCTTTTCTCT	NA	False	NA	31	True	AATAAA	-19	NA	52712324	52714141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823_52712960_52713493
transcript_107116.known	chr4	+	6065	2	FSM	ENSG00000226950.8	ENST00000441504.2	6065	2	0	0	0	0	multi-exon	FALSE	canonical	3	1745	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGACTGGACCATGAT	52692817	True	NA	NA	False	ATTAAA	-18	NA	52712404	52718765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52712823
transcript_107119.known	chr4	+	667	2	FSM	ENSG00000226950.8	ENST00000676262.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACCTTGGGTCTCTTGTC	52692913	True	NA	23	True	AATAAA	-11	NA	52712500	52714133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52712528_52713493
transcript_107121.known	chr4	+	122	1	FSM	ENSG00000212588.1	ENST00000391286.1	122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCAGAAAAAGTTTCGTT	52712979	False	NA	2	True	NA	NA	NA	52713248	52713370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52713200_52713400
transcript_107122.known	chr4	-	2744	4	FSM	ENSG00000226887.8	ENST00000440542.1	2744	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	34.0293990543471	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAAGCCCCCAAACACT	-52750000	False	NA	-13	True	AATAAA	-24	NA	52751399	52743516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52745944_52750709_52750830_52750929_52751070_52751342
transcript_107123.known	chr4	-	3614	3	FSM	ENSG00000226887.8	ENST00000443173.6	3614	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	2	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGAAAGTGATTCACAT	-52750026	False	1399	-22	True	AATAAA	-18	NA	52751425	52742552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52745944_52750929_52751070_52751342
transcript_107124.known	chr4	+	1968	4	FSM	ENSG00000128045.7	ENST00000248706.5	1968	4	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_3	2.86744175568088	229	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGATGTCTAACTTCGTCT	52860424	True	NA	29	True	AATAAA	-17	NA	52862316	52866835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_52862650_52863267_52863325_52864477_52864555_52865334
transcript_107126.known	chr4	-	3162	9	FSM	ENSG00000184178.17	ENST00000401642.8	3162	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	7.88095013307406	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTATTGTGGATTACA	-53364786	True	NA	NA	False	AATAAA	-17	NA	53366061	52872981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_52874062_52885746_52885867_52907456_52907592_52920724_52920871_53145332_53145583_53273825_53274002_53313635_53313764_53352597_53352767_53365103
transcript_107128.known	chr4	-	3978	11	FSM	ENSG00000072201.14	ENST00000263925.8	3978	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	6.38435587980495	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGGAAAAAAAAAAAAAAAAA	-53591216	True	NA	NA	False	NA	NA	NA	53591486	53459300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564_53478743_53481719_53481855_53496022_53496395_53498640_53498844_53507316_53507470_53507985_53508228_53573622_53574089_53591387
transcript_107131.nic	chr4	-	1202	4	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	79426	1155	29592	-1155	3prime_fragment	FALSE	canonical	3	12	junction_3	7.58653778449403	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	NA	False	NA	0	True	AATAAA	-17	NA	53478791	53460455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752_53476982_53478564
transcript_107133.nic	chr4	-	1134	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81077	1155	31243	-1155	3prime_fragment	FALSE	canonical	3	25	junction_2	2.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTCTTTTAGTATGTG	-53477120	False	NA	0	True	AATAAA	-17	NA	53477140	53460455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_107134.nic	chr4	-	960	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81077	1329	31243	-1329	3prime_fragment	FALSE	canonical	3	25	junction_2	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGTATACCCCACTGA	-53477120	False	NA	NA	False	AATAAA	-21	NA	53477140	53460629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_107135.nic	chr4	-	812	3	ISM	ENSG00000072201.14	ENST00000306888.6	3757	10	81148	1406	31314	-1406	3prime_fragment	FALSE	canonical	3	25	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGAGGATTTCTCATTA	-53476985	True	NA	NA	False	ATTAAA	-19	NA	53477069	53460706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_53461043_53461434_53461594_53476752
transcript_107142.known	chr4	+	2180	18	FSM	ENSG00000145216.16	ENST00000358575.9	2180	18	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_13	115.019751575958	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	53370030	True	NA	76	True	AATAAA	-19	NA	53377644	53459668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53440581_53440609_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_107145.known	chr4	+	3396	18	FSM	ENSG00000145216.16	ENST00000337488.11	3396	18	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	113.958469943977	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTTGTGATTTTTCTG	53370026	True	NA	26	True	TATAAA	-36	NA	53377640	53460862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53391429_53391499_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_107161.nic	chr4	+	2140	17	NIC	ENSG00000145216.16	novel	3396	18	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	142	junction_1	105.596445844545	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCCAAGAAAGGAATGTGA	53370019	True	NA	76	True	AATAAA	-19	NA	53377633	53459668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_53377924_53379072_53379118_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53414614_53414723_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_107174.known	chr4	+	1878	15	FSM	ENSG00000145216.16	ENST00000306932.10	1878	15	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_8	95.2078285239449	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	53370081	True	NA	29	True	AATAAA	-30	NA	53377695	53459621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53377924_53379224_53379265_53382277_53382336_53383772_53383877_53389808_53389874_53390520_53390629_53391008_53391140_53399729_53399840_53425871_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_107181.known	chr4	+	1070	7	FSM	ENSG00000145216.16	ENST00000513008.5	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_2	79.5396476956968	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTCTTGTACTATTTC	NA	False	NA	29	True	AATAAA	-30	NA	53425835	53459621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53425966_53428026_53428184_53442652_53442708_53444047_53444104_53452919_53453134_53458652_53458791_53459301
transcript_107182.known	chr4	+	628	2	FSM	ENSG00000248494.1	ENST00000509974.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGATAGTCATTCCACCG	53592922	True	NA	NA	False	CATAAA	-16	NA	53592955	53604047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53593073_53603536
transcript_107183.nnic	chr4	+	385	2	NNC	ENSG00000248494.1	novel	628	2	NA	NA	-54	1872	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTGGCTATCTTCTAA	53592868	True	NA	NA	False	AATAAA	-18	NA	53592901	53595975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_53593073_53595761
transcript_107184.known	chr4	+	347	2	FSM	ENSG00000248494.1	ENST00000502410.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTAATCTGGTCTATATG	53592951	True	NA	NA	False	GATAAA	-24	NA	53592984	53594103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_53593073_53593844
transcript_107185.known	chr4	-	1109	6	FSM	ENSG00000109220.11	ENST00000263921.8	1109	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	19.8736005796635	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCCAGCCTTTTTTATTT	-54062358	True	NA	NA	False	CATAAA	-3	NA	54064605	54009788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_54010146_54013836_54013897_54014062_54014120_54048954_54049111_54049250_54049306_54064181
transcript_107186.known	chr4	+	461	2	FSM	ENSG00000180613.11	ENST00000507839.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTCCCTCACATCCCC	54099510	True	NA	NA	False	NA	NA	NA	54099522	54101928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_54099637_54101581
transcript_107188.known	chr4	+	1146	5	FSM	ENSG00000134853.12	ENST00000507536.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	6.557438524302	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTTCATGTAGCTTGTA	54277109	False	NA	8	True	AATAAA	-17	NA	54277175	54281977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_54277493_54277895_54278007_54278361_54278516_54280315_54280483_54281580
transcript_107191.nic	chr4	+	769	2	ISM	ENSG00000134853.12	ENST00000461294.2	480	3	324	0	-101	0	3prime_fragment	FALSE	canonical	3	31	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTTTTTTGGTATC	54277008	True	NA	NA	False	ATTAAA	-21	NA	54277074	54278246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_54277493_54277895
transcript_107193.known	chr4	+	5147	21	FSM	ENSG00000157404.17	ENST00000288135.6	5147	21	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	28.2935946814822	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCATTTGATTGTTG	54654059	True	NA	19	True	AATAAA	-20	NA	54657956	54740715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_54658082_54695511_54695782_54698283_54698566_54699629_54699767_54703723_54703893_54707097_54707288_54709423_54709540_54723583_54723699_54725856_54726051_54727217_54727325_54727415_54727543_54727822_54727928_54728010_54728122_54729334_54729486_54731327_54731420_54731870_54731999_54733069_54733193_54736497_54736610_54736720_54736821_54737174_54737281_54738428
transcript_107194.nic	chr4	-	1856	11	ISM	ENSG00000128052.10	ENST00000512566.1	2037	13	-320	2094	-18	-2094	5prime_fragment	FALSE	canonical	3	106	junction_5	15.2564740356348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTTTGAAGTTTTAAAA	-55120908	True	NA	NA	False	AATAAA	-34	NA	55125613	55106686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_107197.known	chr4	-	5833	30	FSM	ENSG00000128052.10	ENST00000263923.5	5833	30	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_24	37.7641784604394	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATCCCTTTGCAAGGTTG	-55120890	True	NA	-15	True	ATTAAA	-20	NA	55125595	55078480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55080164_55081955_55082042_55082535_55082636_55087606_55087759_55088867_55088974_55089373_55089474_55089690_55089803_55089955_55090079_55092616_55092715_55094801_55094956_55095576_55095666_55096228_55096343_55097661_55097767_55098136_55098273_55098696_55098804_55101896_55102029_55102361_55102509_55104642_55104985_55105831_55105941_55106686_55106811_55107736_55107894_55110402_55110567_55110653_55110769_55113303_55113482_55114125_55114266_55114873_55115043_55115280_55115412_55118603_55118801_55121096_55121191_55125226
transcript_107200.nnic	chr4	+	643	3	NNC	ENSG00000287060.1	novel	3597	2	NA	NA	-275	26587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCTGTTTGTGTTATTT	55157567	True	NA	NA	False	AATAAA	-18	NA	55157601	55188467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_55158074_55158480_55158521_55188336
transcript_107201.nnic	chr4	+	1298	6	NNC	ENSG00000128039.13	novel	2644	5	NA	NA	64	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	160.569735629103	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAATACTAATGGCAGA	55343143	True	NA	-3	True	AAGAAA	-25	NA	55346305	55370283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_55346558_55351096_55351215_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_107202.known	chr4	+	4061	5	FSM	ENSG00000128039.13	ENST00000264228.9	4061	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_4	27.0970478096785	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCAAGTCGAATTTCTTT	55343079	True	NA	NA	False	ATTAAA	-21	NA	55346241	55373100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55367587_55367723_55369831
transcript_107203.known	chr4	+	2766	4	FSM	ENSG00000128039.13	ENST00000679836.1	2766	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	154.724127257372	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAAGTGCTGGGATTACA	55343050	True	NA	NA	False	NA	NA	NA	55346212	55371911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55346558_55359345_55359489_55364073_55364272_55369831
transcript_107205.known	chr4	+	768	3	FSM	ENSG00000128039.13	ENST00000505210.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	125	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGGTCCACTTTCTGA	55346400	False	NA	24	True	AATAAA	-21	NA	55346411	55370310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55346558_55359345_55359489_55369831
transcript_107210.nnic	chr4	+	1911	7	NNC	ENSG00000134851.13	novel	1931	6	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	240.754139228291	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	55386290	True	NA	20	True	AATAAA	-17	NA	55395919	55426175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_55396165_55396221_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_107214.known	chr4	+	1931	6	FSM	ENSG00000134851.13	ENST00000381334.10	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_1	59.7742419441686	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTTTTTCCTTGTGTGTC	55386327	True	NA	20	True	AATAAA	-17	NA	55395956	55426175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55396397_55411613_55411840_55417071_55417248_55417802_55417986_55424537_55424644_55425375
transcript_107215.known	chr4	+	778	1	FSM	ENSG00000272969.1	ENST00000609234.1	778	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTTTTCTGGCCGTAAA	55547092	False	NA	NA	False	AATAAA	-24	NA	55547111	55547889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55547100_55547900
transcript_107216.known	chr4	-	900	6	FSM	ENSG00000163440.12	ENST00000295645.9	900	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.93907194296653	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTTTACTTATGAC	NA	False	NA	NA	False	AATAAA	-21	NA	55592245	55556518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55556712_55562403_55562613_55569717_55569862_55580820_55580912_55582116_55582238_55592103
transcript_107218.nnic	chr4	-	685	5	NIC	ENSG00000163440.12	novel	900	6	NA	NA	0	-6	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	1.78535710713571	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACTGAATGTTTTACT	NA	False	NA	NA	False	AATAAA	-15	NA	55592245	55556524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_55556712_55569717_55569862_55580820_55580912_55582116_55582238_55592103
transcript_107227.known	chr4	-	816	10	FSM	ENSG00000109255.11	ENST00000264218.7	816	10	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_9	40.7624857793729	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55630474	True	NA	-2	True	ATTAAA	-14	NA	55636298	55595230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_107228.nnic	chr4	-	776	10	NNC	ENSG00000109255.11	novel	816	10	NA	NA	-181	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_9	120.677715884546	245	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTAGTGTTTTAAT	-55636869	False	NA	-2	True	ATTAAA	-14	NA	55636879	55595230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636701
transcript_107233.known	chr4	-	756	9	FSM	ENSG00000109255.11	ENST00000511469.5	756	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_7	118.630729577121	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTAGTGTTTTAATGA	-55636274	False	NA	0	True	ATTAAA	-16	NA	55636284	55595228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55605274_55605350_55607297_55607349_55607436_55607467_55609119_55609180_55630401_55630461_55636080
transcript_107238.known	chr4	-	658	9	FSM	ENSG00000109255.11	ENST00000507338.1	658	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	121.846983959391	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACAATGTTGTAAATGT	-55636258	False	NA	-55	True	NA	NA	NA	55636268	55595283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_55595412_55599141_55599182_55600521_55600576_55607297_55607349_55607436_55607467_55609119_55609180_55616337_55616386_55630401_55630461_55636080
transcript_10724.known	chr1	-	1353	8	FSM	ENSG00000143545.10	ENST00000614713.4	1353	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	243.709093898811	5247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTGTTCTCCACTCAAATC	-153972846	False	NA	11	True	NA	NA	NA	153985366	153981616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153984983
transcript_10725.known	chr1	-	868	8	FSM	ENSG00000143545.10	ENST00000495720.5	868	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	243.012555315186	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGACAACGGCAGAGG	-153973838	True	NA	-111	True	NA	NA	NA	153986358	153982060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986016
transcript_107263.known	chr4	+	894	3	FSM	ENSG00000250821.3	ENST00000636125.2	894	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAATGCATTTTAATGTA	NA	False	NA	NA	False	AATAAA	-27	NA	55819789	55837489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55820148_55831333_55831465_55837084
transcript_107265.known	chr4	+	3357	19	FSM	ENSG00000090989.18	ENST00000346134.11	3357	19	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	24.9359673791855	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	55851355	True	NA	27	True	AATAAA	-44	NA	55853674	55905034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_107266.known	chr4	+	3592	19	FSM	ENSG00000090989.18	ENST00000381295.7	3592	19	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	20.4996988836663	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATACAAAAATTAATTGCAA	55851328	True	NA	79	True	ATTAAA	-21	NA	55853647	55905086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55888887_55888933_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_107268.known	chr4	+	3248	18	FSM	ENSG00000090989.18	ENST00000349598.6	3248	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	34.1781410951462	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTCTATCATATGCTGTC	55851419	True	NA	27	True	AATAAA	-44	NA	55853738	55905034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55877916_55878067_55883822_55883929_55890222_55890387_55891314_55891423_55892634_55892712_55893551_55893781_55896716_55896901_55899684_55899885_55902343_55902539_55904342
transcript_107275.nnic	chr4	+	1458	9	NNC	ENSG00000090989.18	novel	3248	18	NA	NA	-2	6465	at_least_one_novel_splicesite	TRUE	canonical	2	4	junction_8	43.0726131085635	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACCAGCATTCAATTTC	55851326	True	NA	NA	False	AATAAA	-18	NA	55853645	55875218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_55853798_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55874996
transcript_107276.nnic	chr4	+	1612	9	NNC	ENSG00000090989.18	novel	3592	19	NA	NA	0	6465	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	39.3634903813165	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCACCAGCATTCAATTTC	55851328	True	NA	NA	False	AATAAA	-18	NA	55853647	55875218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_55853954_55858313_55858448_55860410_55860542_55864226_55864387_55868335_55868524_55870677_55870906_55871100_55871234_55871848_55871959_55874996
transcript_107281.known	chr4	+	2092	6	FSM	ENSG00000174799.11	ENST00000422247.6	2092	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	5.09901951359278	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	55947248	True	NA	NA	False	NA	NA	NA	55948870	55960925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681
transcript_107283.known	chr4	+	5596	26	FSM	ENSG00000174799.11	ENST00000257287.5	5596	26	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_21	5.69013180866665	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTCTTTCTTACA	55947322	True	NA	7	True	AATAAA	-13	NA	55948944	56033361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_55949060_55952085_55952244_55953084_55953276_55954215_55954384_55957222_55957365_55959681_55959767_55964273_55964403_55965643_55965860_55969062_55969129_55971269_55971409_55974745_55974970_55980142_55980296_55981226_55981380_55985280_55985359_55991933_55992086_55999301_55999418_55999490_55999646_56008326_56008383_56009734_56009904_56011411_56011523_56011799_56011986_56017647_56017858_56019352_56019556_56020675_56020781_56024500_56024615_56031359
transcript_107285.known	chr4	-	3581	15	FSM	ENSG00000157426.14	ENST00000205214.11	3581	15	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	11.8226693349718	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGAAACTTGTCTACACTTG	-56386213	True	NA	NA	False	ATTAAA	-25	NA	56387491	56338289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_107286.known	chr4	-	3480	14	FSM	ENSG00000157426.14	ENST00000602986.5	3480	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	21.1763516645924	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	-56387498	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56338792_56342834_56342967_56343561_56343685_56345126_56345291_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56384069_56384342_56387361
transcript_107290.known	chr4	-	3182	12	FSM	ENSG00000157426.14	ENST00000451613.5	3182	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	20.3193511967743	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTGTCTACACTTGATT	-56387498	False	NA	NA	False	ATTAAA	-28	NA	56387508	56338286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56338792_56349262_56350059_56351341_56351458_56353403_56353597_56354038_56354212_56354704_56354812_56355181_56355424_56371450_56371644_56378147_56378465_56382476_56382598_56384069_56384342_56387361
transcript_107298.known	chr4	-	1222	3	FSM	ENSG00000157426.14	ENST00000510012.1	1222	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	7.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTTGCCCATTTTC	-56386194	True	NA	NA	False	TATAAA	-16	NA	56387472	56381758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56382598_56384069_56384342_56387361
transcript_1073.nic	chr1	-	1053	7	ISM	ENSG00000008128.23	ENST00000460465.5	2333	20	-225	6637	-192	-4910	5prime_fragment	FALSE	canonical	3	24	junction_3	28.8482620312251	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-1724533	False	NA	NA	False	NA	NA	NA	1724549	1709517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_107300.nnic	chr4	-	818	3	NNC	ENSG00000157426.14	novel	3182	12	NA	NA	0	-207	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	40.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTATGCTGACTGTGTA	-56387498	False	NA	NA	False	AATAGA	-30	NA	56387508	56382630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_56383030_56384069_56384342_56387361
transcript_107302.nic	chr4	-	757	2	ISM	ENSG00000157426.14	ENST00000510012.1	1222	3	-36	1973	0	-1308	5prime_fragment	FALSE	canonical	3	83	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACTATGTTTTTTGTCC	-56387498	False	NA	NA	False	GATAAA	-24	NA	56387508	56383731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_56384342_56387361
transcript_107303.nic	chr4	-	495	2	ISM	ENSG00000157426.14	ENST00000510012.1	1222	3	-36	2235	0	-1570	5prime_fragment	FALSE	canonical	3	83	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTCTGTTTACTATTGGA	-56387498	False	NA	NA	False	AATAGA	-16	NA	56387508	56383993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_56384342_56387361
transcript_107304.known	chr4	-	404	2	FSM	ENSG00000157426.14	ENST00000514796.1	404	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTCCTTCCTTCTCCC	-56383021	False	NA	NA	False	NA	NA	NA	56384299	56382423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56382598_56384069
transcript_107307.nic	chr4	-	3560	11	NIC	ENSG00000128059.8	novel	3682	11	NA	NA	39	0	combination_of_known_junctions	TRUE	canonical	3	91	junction_9	167.499731343068	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56424648	True	NA	-11	True	GATAAA	-24	NA	56435576	56393361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406619_56407649_56407717_56435349
transcript_107308.known	chr4	-	3682	11	FSM	ENSG00000128059.8	ENST00000264220.6	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_6	32.9915140604368	968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGTGTCCTTTTTTTTT	-56424687	True	NA	-11	True	GATAAA	-24	NA	56435615	56393361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56395549_56396618_56396740_56399178_56399401_56400783_56400912_56401329_56401482_56402108_56402182_56403039_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_107318.known	chr4	-	563	5	FSM	ENSG00000128059.8	ENST00000507724.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	240.509355327397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCTTATTCCAGTGTCTGA	-56424568	True	NA	NA	False	NA	NA	NA	56435496	56403073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56403186_56403288_56403402_56406494_56406619_56407649_56407717_56435349
transcript_107319.nic	chr4	-	803	5	ISM	ENSG00000128059.8	ENST00000264220.6	3682	11	-27	9701	-27	0	5prime_fragment	FALSE	canonical	3	639	junction_2	14.0356688476182	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGTCTGATATAAATGACA	-56424714	True	NA	NA	False	NA	NA	NA	56435642	56403062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_56403186_56403288_56403402_56406494_56406702_56407649_56407717_56435349
transcript_107320.nic	chr4	-	686	2	ISM	ENSG00000128059.8	ENST00000510643.5	808	6	-134	4261	-27	-4250	5prime_fragment	FALSE	canonical	3	649	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAAAGAAATGGGA	-56424714	True	NA	NA	False	NA	NA	NA	56435642	56407323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_56407717_56435349
transcript_107329.known	chr4	+	3339	10	FSM	ENSG00000128050.9	ENST00000264221.6	3339	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	996.460736808029	3849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGGTCTCTGAAGTCAC	56434089	True	NA	36	True	ATTAAA	-25	NA	56435748	56461368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56435929_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_107330.known	chr4	+	1514	10	FSM	ENSG00000128050.9	ENST00000505164.5	1514	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	997.063329959846	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGCTGACAAGAAAAT	56434092	True	NA	-95	True	NA	NA	NA	56435751	56459499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56435976_56436261_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_107345.known	chr4	+	6371	9	FSM	ENSG00000128050.9	ENST00000512576.3	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	2815	junction_3	300.624662161972	3536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTCTTTGTTGTCAG	56376163	True	NA	4	True	AATAAA	-14	NA	56436259	56464578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56436329_56441662_56441861_56446694_56446874_56448417_56448598_56448709_56448824_56450618_56450703_56451871_56452053_56453602_56453762_56459371
transcript_107346.known	chr4	+	3855	19	FSM	ENSG00000174780.17	ENST00000642900.1	3855	19	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_7	58.8146544684819	745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGTGTTTTGGGTGTTG	56460260	True	NA	16	True	AATAAA	-23	NA	56467616	56503681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56478378_56478504_56478591_56478650_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_107347.known	chr4	+	745	5	FSM	ENSG00000174780.17	ENST00000504757.2	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	68.3168171096985	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTCTCCAAGTTCCTGT	56460261	True	NA	NA	False	ATTAAA	-22	NA	56467617	56474508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279
transcript_107348.known	chr4	+	2406	17	FSM	ENSG00000174780.17	ENST00000510663.6	2406	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	143.384971318475	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATAAATTTTCTGTCATGT	56460260	True	NA	NA	False	AATAAA	-23	NA	56467616	56502415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56467745_56469652_56469774_56471719_56471844_56474053_56474198_56474279_56474392_56476670_56476703_56483138_56483271_56484735_56484865_56486324_56486398_56487948_56488014_56489387_56489484_56490332_56490437_56490567_56490646_56491430_56491569_56495356_56495395_56500535_56500696_56501683
transcript_107349.known	chr4	+	1392	4	FSM	ENSG00000196503.5	ENST00000360096.3	1392	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.39934634239519	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAGCATTTGTCCCATTT	56505195	False	NA	NA	False	AATGAA	-5	NA	56505208	56524448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56505510_56511184_56511348_56518677_56518854_56523696
transcript_107350.known	chr4	+	1447	4	FSM	ENSG00000196503.5	ENST00000640821.3	1447	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTGTCCCATTTATTGT	56505780	True	NA	NA	False	AATGAA	-10	NA	56505790	56524453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56506142_56511184_56511348_56518677_56518854_56523696
transcript_107352.nnic	chr4	+	868	4	NNC	ENSG00000196503.5	novel	1392	4	NA	NA	243	-465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.39934634239519	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCAGTGCATGGGATG	56505437	False	NA	6	True	AATAAA	-18	NA	56505451	56523983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_56505694_56511184_56511348_56518677_56518854_56523696
transcript_107353.nnic	chr4	+	909	3	NIC	ENSG00000196503.5	novel	1447	4	NA	NA	-113	-470	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	4	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTCTCAGTGCATG	56505533	True	NA	1	True	AATAAA	-13	NA	56505677	56523978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_56506142_56511184_56511348_56523696
transcript_107355.known	chr4	+	1640	3	FSM	ENSG00000196503.5	ENST00000645327.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTAGACGAGATGAGG	56505930	False	NA	NA	False	NA	NA	NA	56505940	56524959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56506142_56518677_56518854_56523696
transcript_107356.known	chr4	-	722	4	FSM	ENSG00000128040.12	ENST00000506738.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.48074069840786	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821559	True	NA	-1	True	AATAAA	-17	NA	56821701	56809860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821457
transcript_107357.known	chr4	-	659	4	FSM	ENSG00000128040.12	ENST00000504762.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.94422221866655	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAATTCAGTTCCTACT	-56821552	True	NA	-12	True	AATAAA	-6	NA	56821694	56809871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821502
transcript_107358.known	chr4	-	613	4	FSM	ENSG00000128040.12	ENST00000248701.8	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.69967317119759	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821600	True	NA	-1	True	AATAAA	-17	NA	56821742	56809860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684_56811795_56820535_56820580_56821607
transcript_107360.nnic	chr4	-	714	3	NIC	ENSG00000128040.12	novel	613	4	NA	NA	-145	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	7	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	NA	False	NA	-1	True	AATAAA	-17	NA	56821887	56809860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_56810185_56811684_56811795_56821607
transcript_107361.nnic	chr4	-	646	3	NIC	ENSG00000128040.12	novel	722	4	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821593	True	NA	-1	True	AATAAA	-17	NA	56821735	56809860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_56810185_56820535_56820580_56821457
transcript_107363.nnic	chr4	-	599	3	NIC	ENSG00000128040.12	novel	613	4	NA	NA	-96	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTACTGTTCTCTGTTG	-56821826	False	NA	-1	True	AATAAA	-17	NA	56821838	56809860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_56810185_56820535_56820580_56821607
transcript_107365.known	chr4	-	608	2	FSM	ENSG00000128040.12	ENST00000618802.3	608	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCCTACTGTTCTCTGTT	-56821600	True	NA	-2	True	AATAAA	-16	NA	56821742	56809861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56821457
transcript_107366.known	chr4	-	437	2	FSM	ENSG00000128040.12	ENST00000509707.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTACTGTTCTCTGTTGA	-56811654	False	NA	0	True	AATAAA	-18	NA	56811796	56809859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56810185_56811684
transcript_107369.nnic	chr4	+	1710	4	NNC	ENSG00000084093.19	novel	7371	4	NA	NA	-40	-1692	intron_retention	TRUE	canonical	2	3	junction_1	145.741780785973	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTAGAAAGCAAATCCA	56909106	False	NA	-54	True	AAAAAG	-6	NA	56909149	56930492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_56909217_56910629_56911537_56919786_56919871_56929840
transcript_107370.known	chr4	+	7371	4	FSM	ENSG00000084093.19	ENST00000675105.1	7371	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	142.460130874883	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAATAAAGTTTTAAAAAC	56909146	False	NA	-17	True	NA	NA	NA	56909189	56935822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56909588_56910629_56911537_56919786_56919871_56929840
transcript_107372.known	chr4	-	447	1	FSM	ENSG00000269949.1	ENST00000602820.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTTGTTGTAGACCTT	-56961354	False	NA	-3	True	ATTAAA	-26	NA	56961373	56960926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56960900_56961400
transcript_107373.known	chr4	-	2218	7	FSM	ENSG00000084092.7	ENST00000264230.5	2218	7	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	27.3643117135359	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTTTTCTTTTTTCTT	-56973913	True	NA	-10	True	AATAAA	-14	NA	56977606	56963349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_56963662_56964405_56964527_56966619_56966737_56968383_56968516_56973147_56973354_56973857_56974023_56976441
transcript_107374.known	chr4	+	4108	26	FSM	ENSG00000047315.17	ENST00000381227.5	4108	26	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	106.35101127869	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56977386	True	NA	16	True	AATAAA	-16	NA	56977741	57031158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56977809_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_107376.nic	chr4	+	1121	6	NIC	ENSG00000047315.17	novel	4108	26	NA	NA	-54	4035	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	169.859471328507	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAAAGAAAGATTTTC	56977641	False	NA	NA	False	AATGAA	-10	NA	56977667	56994941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_56977792_56978639_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646
transcript_107379.known	chr4	+	551	2	FSM	ENSG00000047315.17	ENST00000497845.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	432	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATAACTGCAGACATA	56974214	True	NA	NA	False	NA	NA	NA	56978903	56986803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56979005_56986353
transcript_107380.known	chr4	+	3785	25	FSM	ENSG00000047315.17	ENST00000314595.6	3785	25	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_10	65.162284059791	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56974206	True	NA	16	True	AATAAA	-16	NA	56978895	57031158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56979005_56986353_56986427_56990747_56990899_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_107381.known	chr4	+	3666	24	FSM	ENSG00000047315.17	ENST00000431623.6	3666	24	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	111.637951146131	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTGTGATCTTTATTT	56974174	True	NA	16	True	AATAAA	-16	NA	56978863	57031158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_56979005_56986353_56986427_56994403_56994517_56994646_56994867_56995250_56995410_56999616_56999782_57005245_57005443_57005599_57005720_57006815_57007003_57010360_57010505_57010747_57010888_57010988_57011101_57015501_57015657_57017042_57017242_57017559_57017729_57020898_57020996_57022151_57022247_57023329_57023581_57023661_57023752_57024004_57024113_57024885_57025000_57025376_57025538_57030203_57030400_57030898
transcript_107395.nnic	chr4	-	538	3	NNC	ENSG00000289308.1	novel	550	2	NA	NA	-83	89812	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	33.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGACATTTTTAAT	-61764087	True	NA	NA	False	TATAAA	-14	NA	61769732	61659575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_61659724_61752123_61752176_61769394
transcript_107399.known	chr4	+	640	2	FSM	ENSG00000150471.17	ENST00000509089.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGACCAGAAAGAAAAAATAA	NA	False	NA	NA	False	AATATA	-17	NA	61587367	61677392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_61587441_61676825
transcript_10740.known	chr1	-	2398	4	FSM	ENSG00000143570.19	ENST00000368621.5	2398	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	899.004758360909	802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGTACAGTATCTGATTC	-153963427	False	NA	-12	True	AATAAA	-15	NA	153963462	153959110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963058
transcript_107411.known	chr4	-	402	1	FSM	ENSG00000226439.3	ENST00000461060.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACATAAATCTTTGGCACA	NA	False	NA	NA	False	AAGAAA	-4	NA	61775850	61775448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_61775400_61775800
transcript_107412.known	chr4	+	870	1	FSM	ENSG00000243199.1	ENST00000466377.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	853	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	NA	False	NA	NA	False	NA	NA	NA	65573458	65574328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_65573500_65574300
transcript_107413.known	chr4	+	422	2	FSM	ENSG00000250846.6	ENST00000514260.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGATTTAGTCATCTCTG	65670514	False	NA	NA	False	AATAAA	-18	NA	65670529	65693386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_65670674_65693108
transcript_107422.known	chr4	-	6823	19	FSM	ENSG00000145241.11	ENST00000273853.11	6823	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_10	14.5496171092126	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTTTTGTGTAAATTTAAG	-67542850	True	NA	-11	True	AATAAA	-23	NA	67545503	67468761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67472676_67474887_67474979_67489966_67490122_67492179_67492276_67492868_67492998_67493883_67493989_67495158_67495213_67505204_67505285_67506787_67506935_67508813_67509106_67512401_67512570_67514073_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_107425.nic	chr4	-	1500	8	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-92	20853	-92	-2208	5prime_fragment	FALSE	canonical	3	78	junction_2	9.3328474120349	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAGAAGAAAATTCATGGC	-67545561	False	NA	NA	False	TATAAA	-8	NA	67545595	67514257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67514688_67518155_67518369_67519216_67519503_67530814_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_107431.nic	chr4	-	960	5	ISM	ENSG00000145241.11	ENST00000510189.5	2917	14	-92	37021	-92	-18376	5prime_fragment	FALSE	canonical	3	87	junction_1	3.93700393700591	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGTGTGTTTGTATGTGT	-67545561	False	NA	NA	False	CATAAA	-15	NA	67545595	67530425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67530915_67539839_67539935_67540979_67541051_67544148_67544196_67545337
transcript_107432.known	chr4	-	9540	33	FSM	ENSG00000033178.13	ENST00000322244.10	9540	33	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_20	20.0292510703096	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTGCACATTTTTTTAA	-67696527	True	NA	-2	True	AATAAA	-21	NA	67701155	67612651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67619133_67622830_67622926_67623134_67623223_67624125_67624254_67624993_67625188_67626359_67626478_67629070_67629143_67630465_67630536_67631707_67631772_67631856_67631909_67633344_67633474_67634241_67634323_67634428_67634519_67635452_67635559_67638942_67639125_67641150_67641229_67644697_67644779_67645937_67646017_67646723_67646792_67649067_67649212_67662188_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_107433.known	chr4	-	1664	13	FSM	ENSG00000033178.13	ENST00000420827.2	1664	13	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	21.6480689413372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTGAAGATTCTATTAT	-67696525	True	NA	NA	False	TATAAA	-20	NA	67701153	67661662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67662256_67663138_67663216_67663884_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_107435.nic	chr4	-	732	8	ISM	ENSG00000033178.13	ENST00000429659.7	2387	11	-57	8006	-50	7937	5prime_fragment	FALSE	canonical	3	168	junction_5	21.2929038672991	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCATTTCAAACATAACG	-67696577	False	NA	NA	False	AAGAAA	-1	NA	67701205	67670492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_107437.known	chr4	-	2387	11	FSM	ENSG00000033178.13	ENST00000429659.7	2387	11	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	21.5165052924493	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAACAAAAAA	-67696520	True	NA	NA	False	NA	NA	NA	67701148	67662486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67663948_67665188_67665293_67668550_67668675_67670469_67670593_67673696_67673778_67677610_67677723_67678438_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_107438.known	chr4	-	385	5	FSM	ENSG00000033178.13	ENST00000506571.1	385	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	24.5089269450949	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGATGTATTATCATGAG	-67696514	True	NA	NA	False	NA	NA	NA	67701142	67678429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_67678534_67681562_67681592_67682118_67682214_67696644_67696708_67701048
transcript_107441.known	chr4	+	1424	4	FSM	ENSG00000248049.8	ENST00000665498.1	1424	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.31816613336672	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCATGGTGGTGCATGCC	67700080	True	NA	NA	False	ACTAAA	-16	NA	67701389	67732596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67728539_67728687_67730079_67730171_67731505
transcript_107444.known	chr4	+	1445	3	FSM	ENSG00000248049.8	ENST00000498917.2	1445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTATTTGCGCTGGTGTT	67699970	True	NA	9	True	AATAAA	-1	NA	67701279	67722505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67720421_67720633_67721476
transcript_107445.known	chr4	+	2595	3	FSM	ENSG00000248049.8	ENST00000654961.1	2595	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	21	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCTCCAAATATTTTA	67699951	True	NA	-12	True	NA	NA	NA	67701260	67723217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67720421_67721052_67721476
transcript_107447.nic	chr4	+	490	3	FSM	ENSG00000248049.8	ENST00000693410.1	477	3	-17	4	-6	-4	multi-exon	FALSE	canonical	3	16	junction_1	2.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGCCTATGGTATTTTAA	67699957	True	NA	2	True	ATTAAA	-17	NA	67701266	67730198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67728539_67728687_67730073
transcript_107449.known	chr4	+	2233	2	FSM	ENSG00000248049.8	ENST00000506606.1	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCCTATTTGCGCTGGT	67700023	True	NA	6	True	ATTAAA	-14	NA	67701332	67722502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_67701485_67720421
transcript_107452.known	chr4	-	2983	17	FSM	ENSG00000083896.13	ENST00000579690.5	2983	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	67.9719611310428	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTATCTTTTGTATCTTTT	-68349330	True	NA	-6	True	AATAAA	-16	NA	68349753	68313323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318754_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_107453.known	chr4	-	6233	17	FSM	ENSG00000083896.13	ENST00000344157.9	6233	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_16	52.0408493397254	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATGTCTTAAACACAGACT	NA	False	NA	NA	False	AATAAA	-26	NA	68350090	68310386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68332793_68332848_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_107454.known	chr4	-	3244	16	FSM	ENSG00000083896.13	ENST00000355665.7	3244	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	84.7311040881682	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTGTATCTTTTTCT	NA	False	NA	-3	True	AATAAA	-19	NA	68350089	68313320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68314324_68316313_68316449_68318518_68318582_68318689_68318730_68318825_68318863_68320122_68320206_68322748_68322916_68324138_68324224_68330001_68330120_68330201_68330311_68332102_68332198_68333307_68333398_68337026_68337451_68337571_68337901_68338282_68338385_68349725
transcript_107457.known	chr4	+	2122	10	FSM	ENSG00000087128.10	ENST00000305363.9	2122	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.77123616632825	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCTTGACATTATGATAT	68447215	True	NA	3	True	AATAAA	-15	NA	68447462	68497604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_68447524_68461820_68461946_68466630_68466753_68468878_68468947_68471459_68471624_68474722_68474762_68476260_68476439_68477368_68477629_68478848_68478992_68496642
transcript_107461.known	chr4	-	477	2	FSM	ENSG00000272626.1	ENST00000608365.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGGCACTCATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	68906983	68901007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_68901376_68906874
transcript_107463.known	chr4	+	2020	1	FSM	ENSG00000132467.4	ENST00000254803.4	2020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATATGTTCTGTGTGGT	70677305	True	NA	10	True	AATAAA	-22	NA	70688531	70690551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70688500_70690600
transcript_107464.nnic	chr4	-	2692	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	204.408903915656	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTACCTAAGAGTATTTAT	-70831748	True	NA	-14	True	AATAAA	-23	NA	70839920	70819530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839502_70839701
transcript_107467.nnic	chr4	-	1575	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	-23	51	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	204.408903915656	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGATCTGATTTAAAAATA	-70831748	True	NA	-30	True	AATAAA	-31	NA	70839920	70820647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839502_70839701
transcript_107469.known	chr4	-	1765	10	FSM	ENSG00000132463.15	ENST00000514161.5	1765	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	213.053867876845	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAAATTTTGCTGTATT	-70831171	False	NA	NA	False	NA	NA	NA	70839343	70820374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839176
transcript_10747.known	chr1	+	710	1	FSM	ENSG00000282386.1	ENST00000633140.1	710	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATGTCATATATGATT	153964347	False	NA	8	True	AATATA	-23	NA	153964360	153965070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153964400_153965100
transcript_107470.known	chr4	-	2491	10	FSM	ENSG00000132463.15	ENST00000499044.6	2491	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	212.752856097815	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCCTGTATGCTTTCTT	-70831331	False	NA	-4	True	AATAAA	-32	NA	70839503	70819757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839227
transcript_107479.known	chr4	-	1794	10	FSM	ENSG00000132463.15	ENST00000502323.5	1794	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	214.860735832467	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCACAGCTTAGTGTAAAT	-70830829	False	NA	NA	False	TTTAAA	-16	NA	70839001	70820311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70838868
transcript_10748.known	chr1	+	1418	1	FSM	ENSG00000272654.1	ENST00000608236.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGAAGACGTTAGTCTCT	153977723	False	NA	NA	False	ATTAAA	-17	NA	153977742	153979160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153977700_153979200
transcript_10749.known	chr1	+	415	1	FSM	ENSG00000273026.1	ENST00000608147.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTTTGGTATTACTA	153966502	False	NA	4	True	AATAAA	-15	NA	153966515	153966930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153966500_153966900
transcript_107490.known	chr4	-	2682	11	NNC	ENSG00000132463.15	novel	6610	10	NA	NA	10	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	204.408903915656	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTACCTAAGAGTATTT	-70831708	True	NA	-16	True	AATAAA	-21	NA	70839880	70819532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_70820862_70824293_70824369_70825295_70825432_70826123_70826246_70827851_70828037_70831538_70831675_70832306_70832451_70833117_70833274_70836157_70836315_70839470_70839554_70839721
transcript_107491.known	chr4	+	6930	6	FSM	ENSG00000173542.9	ENST00000309395.7	6930	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	10.8554133960895	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTTGCATTACTGT	70899156	True	NA	8	True	AATAAA	-21	NA	70902368	70988168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152_70975287_70979127_70979292_70981979
transcript_107493.nnic	chr4	-	801	2	FSM	ENSG00000289019.1	ENST00000691317.1	806	2	1	4	1	-4	multi-exon	FALSE	canonical	3	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTGTATGTA	-70902065	True	NA	-4	True	ATTAAA	-15	NA	70902251	70899219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_70899718_70901948
transcript_107495.known	chr4	+	2056	4	FSM	ENSG00000173542.9	ENST00000509041.5	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	10.6562449087639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAATTACATATATATAT	70899134	True	NA	NA	False	AATAAA	-17	NA	70902346	70976743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70902551_70958873_70959041_70969930_70970025_70975152
transcript_107496.known	chr4	+	2506	7	FSM	ENSG00000156136.10	ENST00000286648.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	21.1581347634111	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCAGTGTGGTGGTC	70993482	True	NA	20	True	AATAAA	-31	NA	70993648	71030914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_70993927_70998066_70998183_71022366_71022561_71023558_71023707_71025815_71025932_71026664_71026756_71029351
transcript_1075.nic	chr1	-	1000	7	ISM	ENSG00000008128.23	ENST00000358779.9	2419	20	-202	6637	-169	-4910	5prime_fragment	FALSE	canonical	3	37	junction_3	24.7885502242915	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGCCAGGCCGGCGCCT	-1724424	True	NA	NA	False	NA	NA	NA	1724526	1709517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722707_1722832_1724257
transcript_10750.known	chr1	-	1164	8	FSM	ENSG00000143545.10	ENST00000368575.5	1164	8	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	24.4114392723358	11380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGTTTTGGGTAACTT	-153973819	True	NA	-22	True	ATTAAA	-20	NA	153986339	153981649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153982177_153982390_153982445_153982534_153982601_153982718_153982809_153983218_153983297_153983520_153983582_153984720_153984782_153986112
transcript_107500.known	chr4	+	1964	4	FSM	ENSG00000056291.19	ENST00000308744.12	1964	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.0332779621949	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTGCTGTTGTTTTTCT	72031428	True	NA	5	True	TATAAA	-42	NA	72031999	72148305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_72032201_72128584_72128920_72138039_72138140_72146977
transcript_107505.known	chr4	+	1234	3	FSM	ENSG00000056291.19	ENST00000344413.6	1234	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGCTAGTGTGATAATC	NA	False	NA	NA	False	ATTAAA	-29	NA	72031901	72147812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_72032201_72138039_72138140_72146977
transcript_10751.known	chr1	-	2038	4	FSM	ENSG00000143570.19	ENST00000356205.9	2038	4	0	0	0	0	multi-exon	FALSE	canonical	3	1301	junction_3	311.182690178401	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153944769	True	NA	-11	True	AATAAA	-16	NA	153963537	153959109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963494
transcript_107511.nnic	chr4	-	2376	7	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.7460085737335	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTCATTTCTTTGATTGA	-73065057	True	NA	-6	True	AATAAA	-23	NA	73069783	73056079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_73057167_73057960_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068130_73069316
transcript_107515.known	chr4	-	1083	6	FSM	ENSG00000163626.17	ENST00000510031.1	1083	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	21.7568380055559	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTTCCAATAATTTTG	-73065000	True	NA	NA	False	AAGAAA	-5	NA	73069726	73058113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73058288_73061812_73061921_73064777_73064900_73065249_73065414_73068028_73068134_73069316
transcript_107519.nnic	chr4	-	1412	4	NNC	ENSG00000163626.17	novel	6846	6	NA	NA	-28	-4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	23.2283351869125	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGTCATTTCTTTGA	-73065057	True	NA	-10	True	AATAAA	-19	NA	73069783	73056083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_73056849_73065334_73065414_73068028_73068130_73069316
transcript_10752.known	chr1	-	2322	4	FSM	ENSG00000143570.19	ENST00000621013.4	2322	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	885.341867428748	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTCGTTTGTTTTGGG	-153944724	True	NA	0	True	AATAAA	-27	NA	153963492	153959098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963176
transcript_107523.nic	chr4	-	798	3	ISM	ENSG00000163626.17	ENST00000295890.8	6846	6	-42	12822	-28	3367	5prime_fragment	FALSE	canonical	3	46	junction_1	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCATACTTT	-73065057	True	NA	NA	False	ACTAAA	-11	NA	73069783	73065183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_73065414_73068028_73068130_73069316
transcript_107524.nic	chr4	-	663	2	ISM	ENSG00000163626.17	ENST00000449739.6	3027	5	-8	9104	6	3367	5prime_fragment	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGCATACTTT	-73065023	True	NA	NA	False	ACTAAA	-11	NA	73069749	73065183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_73065414_73069316
transcript_107525.known	chr4	-	548	2	FSM	ENSG00000163626.17	ENST00000421792.2	548	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTTTTACTTTTGATT	-73065029	True	NA	NA	False	AATAAA	-1	NA	73069755	73068550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73068660_73069316
transcript_10753.known	chr1	-	2723	3	FSM	ENSG00000143570.19	ENST00000368623.7	2723	3	0	0	0	0	multi-exon	FALSE	canonical	3	1921	junction_2	37	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTACAGTATCTGATTCG	-153963440	False	NA	-11	True	AATAAA	-16	NA	153963475	153959109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528
transcript_107530.nnic	chr4	+	483	2	Antisense	novelGene_ENSG00000132466.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTCTCTATAATTAAA	73104225	True	NA	NA	False	AATAAA	-27	NA	73104320	73110740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_73104434_73110370
transcript_107534.known	chr4	+	685	5	FSM	ENSG00000250220.1	ENST00000502790.1	685	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTGTATTATC	73258898	True	NA	NA	False	TATAAA	-17	NA	73259208	73317953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73259409_73269823_73269954_73302263_73302386_73307075_73307182_73317826
transcript_107535.nnic	chr4	+	584	4	NNC	ENSG00000250220.1	novel	685	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCATTCTTGTATTATC	73258885	True	NA	NA	False	TATAAA	-17	NA	73259195	73317953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_73259409_73302263_73302386_73307059_73307182_73317826
transcript_107536.known	chr4	+	2426	15	FSM	ENSG00000081051.8	ENST00000395792.7	2426	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.0734595787918	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTCATCAATTAAATTT	NA	False	NA	NA	False	AATATA	-6	NA	73436220	73456174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73436348_73437159_73437212_73438173_73438307_73440601_73440814_73442295_73442429_73443346_73443445_73444992_73445123_73447461_73447677_73449334_73449468_73450035_73450134_73450614_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_107537.known	chr4	+	728	5	FSM	ENSG00000081051.8	ENST00000508838.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	10.6301458127346	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCTTATCACAGAAATAA	NA	False	NA	NA	False	GATAAA	-16	NA	73450548	73455741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73450754_73452400_73452625_73453764_73453898_73455235_73455291_73455630
transcript_107538.nnic	chr4	+	447	4	NNC	ENSG00000081051.8	novel	2426	15	NA	NA	-253	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.2930615046504	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	73453102	False	NA	NA	False	AATAAA	-16	NA	73453236	73455777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_73453349_73453764_73453898_73455235_73455291_73455630
transcript_107539.known	chr4	+	476	4	FSM	ENSG00000081051.8	ENST00000506820.1	476	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	12.4721912892465	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTCCAAGTTTGCTTA	73453363	False	NA	NA	False	AATAAA	-16	NA	73453489	73455777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73453631_73453764_73453898_73455235_73455291_73455630
transcript_10754.known	chr1	-	2427	5	FSM	ENSG00000143570.19	ENST00000310483.10	2427	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	975.602474115354	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGTACAGTATCTGATT	-153960001	False	NA	-13	True	AATAAA	-14	NA	153967712	153959111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153960755_153962219_153962351_153962528_153962748_153963596_153963704_153967385
transcript_107543.known	chr4	-	5882	11	FSM	ENSG00000169435.14	ENST00000307439.10	5882	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.22065556157337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTTCCCTGATATAG	-73620391	True	NA	NA	False	ATTAAA	-16	NA	73620436	73571549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73582188_73582291_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_107544.known	chr4	-	4331	11	FSM	ENSG00000169435.14	ENST00000342081.7	4331	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.22065556157337	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGAGGGAA	NA	False	NA	NA	False	NA	NA	NA	73620631	73573144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73582188_73582291_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620438
transcript_107545.known	chr4	-	2735	10	FSM	ENSG00000169435.14	ENST00000395777.6	2735	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.28620410031003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTACCCTAAGGCTG	-73620367	True	NA	NA	False	AATAAA	-9	NA	73620412	73574570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73576311_73576409_73576508_73576612_73576732_73581816_73581869_73585179_73585365_73587839_73587935_73593450_73593594_73598639_73598719_73611730_73611830_73620287
transcript_107546.known	chr4	+	1537	4	FSM	ENSG00000124875.10	ENST00000226317.10	1537	4	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_3	6.94422221866655	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTGTTTCTCCTTCT	73835893	True	NA	4	True	AATAAA	-15	NA	73836677	73838760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73836860_73836963_73837097_73837202_73837287_73837622
transcript_107548.known	chr4	+	743	3	FSM	ENSG00000109272.4	ENST00000226524.4	743	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGACAGCTTTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	73853295	73854483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73853463_73853782_73853910_73854034
transcript_10755.known	chr1	-	1273	5	FSM	ENSG00000143543.15	ENST00000271843.9	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	1051	junction_3	17.7200451466693	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGAGGTACCCTCTCA	-153965154	False	12520	-2	True	AATAAA	-21	NA	153977674	153974268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153976776_153976975_153977014_153977169
transcript_107550.known	chr4	+	1174	4	FSM	ENSG00000163739.5	ENST00000395761.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3.29983164553722	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAATTTTTTAATTGT	73869274	True	NA	NA	False	NA	NA	NA	73869392	73871308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_73869571_73869668_73869793_73869905_73869990_73870520
transcript_107551.nnic	chr4	-	815	3	FSM	ENSG00000163737.5	ENST00000687529.1	715	3	-103	3	-103	-3	multi-exon	FALSE	canonical	3	13	junction_2	15	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGTAGTATAGTCAAAATA	-73981700	True	NA	-14	True	AATAAA	-14	NA	73982130	73981076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73981292_73981416_73981544_73981657
transcript_107552.known	chr4	-	773	3	FSM	ENSG00000163737.5	ENST00000296029.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	1	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAGTAAATAAATAAGACT	-73981597	True	NA	NA	False	AATAAA	-30	NA	73982027	73980810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73981292_73981416_73981544_73981862
transcript_107556.known	chr4	-	1307	3	FSM	ENSG00000163736.4	ENST00000296028.4	1307	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGTCATCTATTATTA	-73988180	True	NA	NA	False	AATAAA	-14	NA	73988190	73986438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73987375_73987516_73987653_73987955
transcript_107557.known	chr4	-	2436	4	FSM	ENSG00000163735.7	ENST00000296027.5	2436	4	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_3	17.4610678049451	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATATTGTTTCTCCTTCC	-73997863	True	NA	-3	True	AATAAA	-24	NA	73998677	73995641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_73997656_73998011_73998096_73998205_73998339_73998472
transcript_10756.known	chr1	-	1216	4	FSM	ENSG00000143543.15	ENST00000368589.5	1216	4	0	0	0	0	multi-exon	FALSE	canonical	3	1087	junction_2	4.32049379893857	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	-153965140	False	12520	-16	True	AATAAA	-15	NA	153977660	153974511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169
transcript_107561.known	chr4	-	1075	4	FSM	ENSG00000163734.4	ENST00000296026.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1.69967317119759	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATGTGGTTTTTCAAA	-74037993	True	NA	NA	False	AATAAA	-18	NA	74038689	74036588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74037278_74038092_74038177_74038289_74038414_74038511
transcript_107564.nnic	chr4	-	1091	4	NNC	ENSG00000081041.9	novel	1115	4	NA	NA	-306	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	2.94392028877595	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTGTTTTATTTT	NA	False	NA	NA	False	AATAAA	-14	NA	74099502	74097039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_74097772_74098600_74098685_74098798_74098923_74099351
transcript_107565.known	chr4	-	577	3	FSM	ENSG00000081041.9	ENST00000296031.4	577	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGCAGAGGCCACCT	-74099085	True	NA	NA	False	NA	NA	NA	74099195	74097675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74097772_74098600_74098685_74098798
transcript_107567.known	chr4	+	2389	9	FSM	ENSG00000163738.19	ENST00000359107.10	2389	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	48.7697075549977	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	74156427	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_10757.known	chr1	-	1040	5	FSM	ENSG00000143543.15	ENST00000356648.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	424.801939143408	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTTCTGTAACTT	-153965118	False	12520	-16	True	AATAAA	-15	NA	153977638	153974511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_153974836_153975825_153975906_153976692_153977014_153977169_153977390_153977543
transcript_107571.known	chr4	+	2355	8	FSM	ENSG00000163738.19	ENST00000325278.7	2355	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	7.34569150410425	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTATTCTTTTTTTCTGT	74156427	True	NA	NA	False	AATAAA	-17	NA	74158117	74303099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74174505_74174691_74175280_74175404_74199793_74199947_74201262_74201371_74225301_74225395_74281424_74281551_74301696
transcript_107573.known	chr4	+	2007	7	FSM	ENSG00000163738.19	ENST00000423607.6	2007	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	59.1826269553265	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATGGAAGAAATGGT	74156417	True	NA	NA	False	ATTAAA	-25	NA	74158107	74183931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054_74160089_74174505_74174691_74175280_74175404_74180686_74180867_74181685_74181792_74182726
transcript_107579.known	chr4	+	468	3	FSM	ENSG00000163738.19	ENST00000484725.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	78.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTCAGGGCGGGATAT	74156484	True	NA	NA	False	NA	NA	NA	74158174	74162106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054_74160089_74161779
transcript_10758.known	chr1	+	467	5	FSM	ENSG00000177954.14	ENST00000643794.1	467	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	14528.4959884876	14421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTATTGTCTTGTTT	153902405	True	NA	16	True	AATAAA	-16	NA	153990762	153992150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153990803_153990913_153991035_153991114_153991224_153991565_153991677_153992064
transcript_107581.known	chr4	+	2363	2	FSM	ENSG00000163738.19	ENST00000461101.1	2363	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAACCATCTTGCTGCTTT	74156427	True	NA	18	True	ATTAAA	-19	NA	74158117	74162253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74158282_74160054
transcript_107584.known	chr4	-	1863	1	FSM	ENSG00000269559.2	ENST00000600169.2	1863	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCTTTATTCATATTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	74158373	74156510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_74156500_74158400
transcript_107585.known	chr4	+	1234	6	FSM	ENSG00000109321.11	ENST00000395748.8	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGAGAGTTTGAATAT	74445125	True	NA	NA	False	ATTAAA	-15	NA	74445135	74455005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74445407_74446533_74446783_74449046_74449249_74450379_74450533_74452543_74452656_74454758
transcript_107586.known	chr4	+	5011	4	FSM	ENSG00000169116.11	ENST00000307428.7	5011	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	10.2089285540757	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTCTGTGGGTGATTC	74932072	True	NA	14	True	ATTAAA	-16	NA	74933115	75050113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_74933371_75012424_75013151_75033882_75033962_75046162
transcript_107598.nnic	chr4	-	836	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	-22	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	19.09624744987	85	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	-75126590	True	NA	-24	True	AATAAA	-13	NA	75127280	75081946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127065
transcript_107599.nnic	chr4	-	770	4	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	-22	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	19.09624744987	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	-75126590	True	NA	-24	True	AATAAA	-13	NA	75127280	75081946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75121924_75122020_75127131
transcript_1076.known	chr1	-	2078	7	FSM	ENSG00000215790.8	ENST00000647043.1	2078	7	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	60.6071136272156	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTCTCCCTGCTTTGTTT	-1745868	False	NA	NA	False	AATAAA	-22	NA	1745919	1724837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1725423_1734689_1734836_1738320_1738449_1738921_1739058_1739235_1739705_1744250_1744669_1745723
transcript_107601.nnic	chr4	-	666	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42503	-17	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	1	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCTCACAAATTA	-75126530	True	NA	-19	True	AATAAA	-18	NA	75127220	75081941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75121924_75122020_75127065
transcript_107602.nnic	chr4	-	660	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	-17	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	1	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTGTTTCTCACAAATTA	-75126590	True	NA	-19	True	AATAAA	-18	NA	75127280	75081941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75121924_75122020_75127131
transcript_107603.nnic	chr4	-	741	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42563	-22	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_2	19.5	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	-75126590	True	NA	-24	True	AATAAA	-13	NA	75127280	75081946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75127065
transcript_107604.nnic	chr4	-	694	3	NNC	ENSG00000260265.1	novel	785	2	NA	NA	-42582	-22	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	20	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGTTTGTTTCTCACA	-75126609	True	NA	-24	True	AATAAA	-13	NA	75127299	75081946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_75082358_75084588_75084704_75127131
transcript_107607.known	chr4	+	777	4	FSM	ENSG00000250735.5	ENST00000515230.1	777	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAGGGGGACTTACTA	75401140	True	NA	NA	False	NA	NA	NA	75401217	75423023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75401293_75407894_75408013_75422053_75422193_75422578
transcript_107615.known	chr4	+	681	3	FSM	ENSG00000250735.5	ENST00000507739.5	681	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCCTGAGGGGGACTTACT	75401117	True	NA	NA	False	NA	NA	NA	75401194	75423022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75401293_75422053_75422193_75422578
transcript_107625.known	chr4	-	728	9	FSM	ENSG00000163743.14	ENST00000513909.5	728	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	259.979055646796	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTTGTGAATCCTATAA	-75514164	False	NA	NA	False	NA	NA	NA	75514256	75482603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508823_75508936_75509176_75509297_75514154
transcript_107626.known	chr4	-	1011	9	FSM	ENSG00000163743.14	ENST00000512706.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	197.521359604474	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAATCATATTACAAGTA	-75506552	True	NA	NA	False	NA	NA	NA	75514430	75482412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514240
transcript_107636.known	chr4	-	1735	8	FSM	ENSG00000163743.14	ENST00000380840.6	1735	8	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	211.196397619247	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATACCTCTTACTTCAG	-75506408	True	NA	NA	False	NA	NA	NA	75514286	75481468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75514196
transcript_107643.known	chr4	+	3549	5	FSM	ENSG00000174796.12	ENST00000311638.7	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	5.76085931090146	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735_75521862_75526959
transcript_107650.known	chr4	+	655	4	FSM	ENSG00000174796.12	ENST00000503831.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	6.64997911442	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTACATATGTAGTTCACT	75513470	True	NA	NA	False	AATAGA	-16	NA	75514488	75522050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75521735
transcript_107652.known	chr4	+	3423	4	FSM	ENSG00000174796.12	ENST00000380837.7	3423	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	26.4112770527204	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATGTGGTTTTATAC	75513454	True	NA	NA	False	AATAAA	-17	NA	75514472	75530026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771_75516980_75526959
transcript_107654.known	chr4	+	1132	3	FSM	ENSG00000174796.12	ENST00000504384.5	1132	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGATCTAAGAACAGGAG	75513419	True	NA	NA	False	CATAAA	-34	NA	75514437	75517720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75514521_75515432_75515533_75516771
transcript_107656.known	chr4	-	4408	9	FSM	ENSG00000163743.14	ENST00000324439.10	4408	9	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_5	18.0792526117647	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGTACCCTTTGATCA	-75506525	True	NA	NA	False	AGTAAA	-24	NA	75514403	75479032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490702_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_107657.known	chr4	-	1304	9	FSM	ENSG00000163743.14	ENST00000505105.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	202.854897340439	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTATAGAAAGTTTTTT	-75506434	True	NA	-10	True	AATAAA	-14	NA	75514312	75482007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75482667_75490580_75490664_75491610_75491638_75491723_75491783_75491888_75491934_75494100_75494180_75508819_75508936_75509176_75509297_75514196
transcript_107658.known	chr4	+	4135	26	FSM	ENSG00000138768.15	ENST00000264904.8	4135	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	373.874130691066	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	75706551	True	NA	18	True	AATAAA	-19	NA	75724597	75814286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75760593_75760606_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75795335_75795357_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_107660.known	chr4	+	4123	24	FSM	ENSG00000138768.15	ENST00000514213.7	4123	24	0	0	0	0	multi-exon	FALSE	canonical	3	741	junction_5	157.630673130363	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAGGCGACTTTTCTTA	75706530	True	NA	18	True	AATAAA	-19	NA	75724576	75814286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078_75801201_75804133_75804273_75805139_75805304_75806485_75806573_75808952_75809052_75810431_75810540_75812159_75812376_75813205
transcript_107664.nic	chr4	+	2207	17	ISM	ENSG00000138768.15	ENST00000514213.7	4123	24	-53	13161	-53	-5430	5prime_fragment	TRUE	canonical	3	741	junction_5	123.996960018179	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAGGTGAAAAAAAC	75724387	True	NA	31	True	GATAAA	-4	NA	75724523	75801125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_75724886_75752372_75752460_75752539_75752605_75757496_75757574_75770438_75770540_75770821_75770925_75771081_75771138_75774675_75774797_75782679_75782859_75787061_75787203_75790149_75790239_75790642_75790798_75793689_75793902_75799621_75799733_75800350_75800470_75800617_75800800_75801078
transcript_107667.known	chr4	-	5398	13	FSM	ENSG00000138757.15	ENST00000677265.1	5398	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	893.406258683896	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715850	True	NA	NA	False	NA	NA	NA	75724465	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724055_75724177_75724275
transcript_10767.known	chr1	+	573	4	FSM	ENSG00000177954.14	ENST00000493224.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	13826.4394147188	1725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATCCTGTTTATTGTCT	153902405	True	NA	11	True	AATAAA	-11	NA	153990762	153992145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153991035_153991114_153991224_153991565_153991677_153992064
transcript_107671.known	chr4	-	4321	12	FSM	ENSG00000138757.15	ENST00000359707.9	4321	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	760.758983781959	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTATGTCCCTAATTT	-75638818	True	NA	-20	True	AATAAA	-19	NA	75673411	75642785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_107672.known	chr4	-	5327	12	FSM	ENSG00000138757.15	ENST00000678062.1	5327	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_5	864.993679812577	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75724454	False	NA	NA	False	NA	NA	NA	75724548	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75654082_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_107673.known	chr4	-	5189	12	FSM	ENSG00000138757.15	ENST00000677583.1	5189	12	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_11	805.250866921412	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715762	True	NA	NA	False	NA	NA	NA	75724377	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75694797_75694930_75724275
transcript_107674.known	chr4	-	5390	12	FSM	ENSG00000138757.15	ENST00000676666.1	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_11	771.367734493855	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75724495	False	NA	NA	False	NA	NA	NA	75724589	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724055_75724177_75724275
transcript_10768.known	chr1	+	352	4	FSM	ENSG00000177954.14	ENST00000651669.1	352	4	0	0	0	0	multi-exon	FALSE	canonical	3	23887	junction_3	4279.67226159512	266285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGTCTTGTTTAAGTG	153902404	True	NA	21	True	AATAAA	-21	NA	153990761	153992155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153990803_153991114_153991224_153991565_153991677_153992064
transcript_107683.known	chr4	-	5142	11	FSM	ENSG00000138757.15	ENST00000678552.1	5142	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	618.109868874458	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75672969	False	NA	NA	False	NA	NA	NA	75673205	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673018
transcript_107684.known	chr4	-	2609	11	FSM	ENSG00000138757.15	ENST00000357854.7	2609	11	0	0	0	0	multi-exon	FALSE	canonical	3	1778	junction_4	192.258263801585	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACTAGCATATTATTTAT	-75638808	True	NA	-30	True	AGTAAA	-2	NA	75673401	75644388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_107685.known	chr4	-	5155	11	FSM	ENSG00000138757.15	ENST00000678122.1	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_10	565.804241765648	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75715860	True	NA	NA	False	NA	NA	NA	75724475	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75655065_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75724275
transcript_10769.known	chr1	+	496	3	FSM	ENSG00000177954.14	ENST00000477151.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	23887	junction_2	4568	3025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCCTGTTTATTGTCTT	153902563	False	NA	12	True	AATAAA	-12	NA	153990920	153992146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153991224_153991565_153991677_153992064
transcript_107699.known	chr4	-	6379	11	FSM	ENSG00000138757.15	ENST00000678875.1	6379	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_4	593.361576106846	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGTTTGATGCCAGTG	-75673312	False	NA	NA	False	NA	NA	NA	75673548	75641848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75645703_75646337_75646457_75647028_75647158_75648638_75648742_75653982_75655247_75655767_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_107702.nic	chr4	-	750	6	ISM	ENSG00000138757.15	ENST00000357854.7	2609	11	-62	11454	3	0	5prime_fragment	FALSE	canonical	3	1876	junction_5	167.904020202019	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGAAAGACAACCATCTC	-75673227	False	NA	NA	False	NA	NA	NA	75673463	75655842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_75655871_75656923_75657015_75657556_75657731_75658842_75658925_75661930_75662050_75673207
transcript_10771.known	chr1	+	329	1	FSM	ENSG00000231416.1	ENST00000431295.1	329	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAAACTTTTGAGTAA	153995575	False	NA	NA	False	NA	NA	NA	153995631	153995960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_153995600_153996000
transcript_107714.nic	chr4	-	1036	3	NIC	ENSG00000138757.15	novel	265	2	NA	NA	-298	159	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	56	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATTTCAGGTTAGTCTGA	-75724793	False	NA	NA	False	NA	NA	NA	75724887	75662222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_75662526_75724055_75724177_75724275
transcript_107715.nnic	chr4	-	1108	3	NIC	ENSG00000138757.15	novel	2441	2	NA	NA	-298	18	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	47	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGAGTGATCTTTTTCTA	-75724793	False	NA	NA	False	ATTAAA	-17	NA	75724887	75721869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_75722245_75724055_75724177_75724275
transcript_107716.nnic	chr4	-	1008	3	NIC	ENSG00000138757.15	novel	2441	2	NA	NA	-298	-82	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	47	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACGGCCTGACTTGCA	-75724793	False	NA	NA	False	AATAAA	-22	NA	75724887	75721969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_75722245_75724055_75724177_75724275
transcript_107717.nic	chr4	-	1484	3	NIC	ENSG00000138757.15	novel	151	2	NA	NA	-298	482	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	54.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTAAGGGCAGGACTATG	-75724793	False	NA	NA	False	AATAAA	-17	NA	75724887	75722983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_75723735_75724055_75724177_75724275
transcript_107719.known	chr4	-	678	2	FSM	ENSG00000138757.15	ENST00000507701.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1876	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCCGACCTTTATTTCAT	-75638757	True	NA	NA	False	NA	NA	NA	75673350	75661514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75662050_75673207
transcript_107722.known	chr4	-	246	2	FSM	ENSG00000138757.15	ENST00000678389.1	246	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCGTATGCCTGT	-75715762	True	NA	NA	False	AATACA	-12	NA	75724377	75662381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75662526_75724275
transcript_107725.known	chr4	-	2441	2	FSM	ENSG00000138757.15	ENST00000677094.1	2441	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATACATATAATCAAAATT	-75715812	True	NA	NA	False	CATAAA	-37	NA	75724427	75721887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75724177_75724275
transcript_10774.known	chr1	-	1219	9	FSM	ENSG00000143549.21	ENST00000271850.11	1219	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2021.51088297837	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAACATTCCAAATAATT	-154192039	False	NA	NA	False	NA	NA	NA	154192058	154157317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154191185_154191312_154191901
transcript_107750.known	chr4	-	3003	22	FSM	ENSG00000198301.12	ENST00000356260.10	3003	22	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_12	33.8689618377021	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTACCTTTGTATGTGGAGT	-75986641	True	NA	-10	True	AATAAA	-20	NA	75990945	75949914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981471_75981932_75982038_75990751
transcript_107751.known	chr4	-	3080	22	FSM	ENSG00000198301.12	ENST00000395710.5	3080	22	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_20	85.8056920026017	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTGGAGTGGTGTGTGG	-75986634	True	NA	-1	True	AATAAA	-29	NA	75990938	75949905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_75950798_75955974_75956137_75957324_75957410_75957517_75957709_75957846_75957942_75960065_75960193_75961027_75961105_75961210_75961309_75964134_75964212_75965763_75965823_75967276_75967335_75969295_75969400_75970308_75970379_75971356_75971459_75973316_75973392_75974075_75974134_75975743_75975845_75975923_75975996_75977645_75977757_75981371_75981546_75981932_75982038_75990751
transcript_107752.nic	chr4	+	1530	10	NIC	ENSG00000156219.17	novel	1528	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.684934889218775	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGCTCAATACTGTTAGT	NA	False	NA	NA	False	AATAAA	-31	NA	76074685	76112802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_76074820_76075880_76075959_76081823_76082536_76097643_76097677_76098954_76098988_76100290_76100321_76100794_76100825_76100989_76101020_76103936_76103970_76112385
transcript_107765.known	chr4	-	2249	12	FSM	ENSG00000138750.15	ENST00000264883.8	2249	12	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_11	47.4343391323798	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATTCTGTCTGGTGCTT	-76137487	True	NA	-5	True	AATAAA	-24	NA	76148397	76114663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76124648_76124757_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76136185_76136413_76144148_76144293_76144389_76144474_76148307
transcript_107766.known	chr4	-	1938	10	FSM	ENSG00000138750.15	ENST00000507257.5	1938	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	254.903225403265	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGGTGCTTTATTT	-76137506	True	NA	0	True	AATAAA	-29	NA	76148416	76114658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_76115495_76117663_76117775_76118074_76118195_76130655_76130750_76131229_76131285_76132522_76132720_76134174_76134363_76144148_76144293_76144389_76144474_76148307
transcript_107768.known	chr4	+	1533	8	FSM	ENSG00000189157.14	ENST00000424749.7	1533	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.74234076362795	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTCTATTGCCTTTTTC	76251586	True	NA	NA	False	AATAAA	-23	NA	76251720	76283783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76251821_76256177_76256524_76263703_76263844_76268659_76268769_76271567_76271769_76278068_76278225_76280263_76280342_76283380
transcript_107777.nic	chr4	+	494	3	ISM	ENSG00000189157.14	ENST00000510328.5	1002	4	19	9744	-2	0	5prime_fragment	FALSE	canonical	2	8	junction_1	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCGTAAAGGAATCATTT	76251584	True	NA	NA	False	ATTAAA	-36	NA	76251718	76268911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_76251821_76263703_76263844_76268659
transcript_107779.known	chr4	+	2244	2	FSM	ENSG00000118804.9	ENST00000237642.7	2244	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGTCTGAATTATTTG	76306247	True	NA	11	True	AATAAA	-22	NA	76306732	76311130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76306990_76309143
transcript_107781.known	chr4	+	628	3	FSM	ENSG00000138771.16	ENST00000466541.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGGCAGCCATGTACC	76436048	False	NA	9	True	AATAAA	-23	NA	76436145	76559576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76436221_76555608_76555764_76559178
transcript_107783.nnic	chr4	-	457	3	Antisense	novelGene_ENSG00000138771.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	3.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTGTCTCTTGACTTA	-76435469	True	NA	NA	False	AATAAA	-19	NA	76435502	76425966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_76426204_76434681_76434753_76435353
transcript_107785.known	chr4	+	5545	10	FSM	ENSG00000138758.12	ENST00000264893.11	5545	10	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_8	36.6272515424725	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTGCCCTTTTTTGTG	76934994	True	NA	21	True	CATAAA	-33	NA	76949751	77038615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782_77030971_77034496
transcript_107788.known	chr4	+	2615	9	FSM	ENSG00000138758.12	ENST00000502584.5	2615	9	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_8	34.5570181005248	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACTGAGAGAGTTTTAAA	76934993	True	NA	NA	False	AATAAA	-19	NA	76949750	77032158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628_77028762_77030782
transcript_107791.nic	chr4	+	1142	8	ISM	ENSG00000138758.12	ENST00000502584.5	2615	9	22	3472	7	-2150	5prime_fragment	FALSE	canonical	3	588	junction_2	32.8664583068005	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAATGAGACAAAT	76935015	True	NA	NA	False	AAAAAG	-32	NA	76949772	77028686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_76949931_76996424_76996540_77005600_77005797_77011734_77011922_77014855_77015018_77019164_77019262_77020501_77020671_77028628
transcript_107794.known	chr4	+	5471	8	FSM	ENSG00000138764.15	ENST00000316355.10	5471	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	13.6381816969859	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCTGGTTATATGCTTCC	77155796	True	NA	2	True	AATAAA	-20	NA	77157206	77170060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_77157507_77158532_77158671_77159366_77159505_77160720_77160972_77161479_77161559_77161648_77161748_77164273_77164480_77165800
transcript_107796.known	chr4	+	578	4	FSM	ENSG00000138764.15	ENST00000512918.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	53.0241035337285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCACTTATACCATACTA	77158344	False	NA	NA	False	NA	NA	NA	77158355	77160926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_77158452_77158532_77158671_77159366_77159505_77160720
transcript_107801.nic	chr4	+	1279	9	NIC	ENSG00000169288.18	novel	1175	9	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	23	junction_1	124.356279998237	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	77857265	True	NA	17	True	AATAAA	-19	NA	77862859	77952785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_77863014_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_107807.known	chr4	+	1175	9	FSM	ENSG00000169288.18	ENST00000315567.13	1175	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	39.4158518238538	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCTTTTAGACCCTGTG	77857235	True	NA	17	True	AATAAA	-19	NA	77862829	77952785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_77862880_77871743_77871856_77883241_77883501_77885255_77885340_77887219_77887292_77894138_77894251_77909265_77909373_77949796_77949879_77952488
transcript_107808.known	chr4	+	2871	19	FSM	ENSG00000138759.20	ENST00000502446.6	2871	19	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_18	13.4794081637305	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAACCCAATTGCCTTTT	78057453	False	NA	NA	False	ATTAAA	-24	NA	78057569	78319653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_78058086_78065984_78066017_78237509_78237618_78245232_78245326_78252391_78252552_78255241_78255376_78265024_78265109_78266833_78266936_78267240_78267433_78278654_78278745_78281397_78281434_78282819_78282968_78284404_78284549_78286404_78286540_78308065_78308210_78315593_78315735_78317367_78317509_78318809_78318987_78319359
transcript_107812.nnic	chr4	+	1009	5	NNC	ENSG00000138759.20	novel	2297	4	NA	NA	22	23018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.0525588832576	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGGTTGACTGGATAAATC	78056210	False	NA	2	True	AATAAA	-42	NA	78057344	78095125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_78058086_78065984_78066017_78089774_78089859_78093017_78093046_78095001
transcript_107819.known	chr4	+	1432	13	FSM	ENSG00000138772.13	ENST00000264908.11	1432	13	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	20.637748585218	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTTTGTTTGCTTT	78550092	True	NA	25	True	AATAAA	-21	NA	78551769	78610447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_78551860_78554435_78554489_78573179_78573268_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_107825.nnic	chr4	+	657	4	NNC	ENSG00000138772.13	novel	571	5	NA	NA	-72	-7107	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_3	94.8343585181845	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTATTTTTTTCAGT	78551645	False	NA	NA	False	AATAAA	-13	NA	78551674	78575184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_78551860_78554435_78554489_78573179_78573268_78574853
transcript_107826.nnic	chr4	+	613	4	NNC	ENSG00000138772.13	novel	571	5	NA	NA	-30	-7098	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	99.0633916013153	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCAGTTGGTTTGTC	78550039	True	NA	NA	False	AATAAA	-22	NA	78551716	78575193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_78551860_78554435_78554489_78573179_78573268_78574864
transcript_107828.known	chr4	+	1335	12	FSM	ENSG00000138772.13	ENST00000512884.5	1335	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	59.7009074228143	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGATAATAAAAATTGTTG	78550069	True	NA	-7	True	ATTAAA	-8	NA	78551746	78610415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_78551860_78554435_78554489_78579026_78579122_78582176_78582291_78586259_78586351_78591543_78591624_78595380_78595438_78595793_78595888_78597318_78597415_78601509_78601569_78604276_78604400_78610055
transcript_107829.known	chr4	-	9811	6	FSM	ENSG00000163291.14	ENST00000512733.5	9811	6	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_4	39.5201214573032	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGTAGTGAATTTTGTC	-78936698	True	NA	NA	False	AATACA	-18	NA	78939438	78911877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_78920682_78923856_78923948_78926520_78926719_78930169_78930326_78935120_78935284_78939039
transcript_107844.nnic	chr4	-	1682	3	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	4.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTTGTTTACTCATTT	-79559399	True	NA	2	True	CATAAA	-28	NA	79559412	79539914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79553911_79554048_79559111
transcript_10785.known	chr1	-	1248	7	FSM	ENSG00000143549.21	ENST00000509409.5	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	1713.17545478824	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAAGGTGATTCCAGGA	-154080907	True	NA	NA	False	NA	NA	NA	154183227	154157111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154182987
transcript_107851.nnic	chr4	-	882	3	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_2	4.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGAAGCCTGTGTCTAG	-79559399	True	NA	-8	True	ATTAAA	-16	NA	79559412	79540714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79553911_79554048_79559111
transcript_107855.nnic	chr4	-	1540	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATTTGTTTACTCATTT	-79559393	False	NA	2	True	CATAAA	-28	NA	79559406	79539914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79559111
transcript_107858.nnic	chr4	-	740	2	Antisense	novelGene_ENSG00000250334.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCGAAGCCTGTGTCTAG	-79559393	False	NA	-8	True	ATTAAA	-16	NA	79559406	79540714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_79541160_79559111
transcript_107862.known	chr4	-	8419	17	FSM	ENSG00000163297.18	ENST00000403729.7	8419	17	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_14	4.97454457714473	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTCTGAAAGTCTCTG	NA	False	NA	NA	False	AATAAA	-31	NA	80073229	79901145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_79907468_79977620_79977702_79978006_79978175_79983877_79983971_79984818_79984864_80008520_80008617_80018897_80018977_80031622_80031693_80033471_80033571_80035971_80036033_80054271_80054353_80055149_80055219_80055359_80055468_80055931_80056014_80069435_80069508_80071582_80071655_80072408
transcript_107864.known	chr4	-	1640	14	FSM	ENSG00000138669.10	ENST00000509474.5	1640	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	4.62435026621204	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAAAGAAATTCCTGCAC	-81154029	True	NA	NA	False	NA	NA	NA	81154253	81089596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_81089804_81092385_81092453_81104369_81104433_81105812_81105936_81110447_81110612_81135154_81135297_81137392_81137483_81140532_81140670_81142793_81142948_81144231_81144331_81148883_81148953_81151959_81152055_81153643_81153722_81154101
transcript_107868.known	chr4	-	498	5	FSM	ENSG00000138670.19	ENST00000512343.5	498	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.01041064547005	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCCTCTGATTGAGAAG	-82044222	False	NA	NA	False	NA	NA	NA	82044244	81602870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_81602923_81635797_81635898_81824517_81824572_81915310_81915359_82044000
transcript_107869.known	chr4	-	2941	14	FSM	ENSG00000138670.19	ENST00000264400.7	2941	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.6332495807108	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTGGCGTCTTTCTTTTC	-81471588	True	NA	1	True	AATATA	-22	NA	81471907	81426392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_81427793_81432298_81432372_81433839_81433964_81434638_81434735_81440833_81440930_81442296_81442377_81445525_81445629_81445742_81445839_81447503_81447579_81448068_81448285_81456650_81456789_81457498_81457622_81459331_81459515_81471769
transcript_10787.known	chr1	-	3148	8	FSM	ENSG00000143549.21	ENST00000368533.8	3148	8	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_2	219.329125530839	3327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTGCTTGTTCCTTAC	-154080869	True	NA	-5	True	ATTAAA	-31	NA	154183189	154155307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_10788.known	chr1	-	1115	8	FSM	ENSG00000143549.21	ENST00000368531.6	1115	8	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	1627.94645903033	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGTAACTGCTTCATC	-154183111	False	NA	2	True	AATAAA	-17	NA	154183130	154158608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154159049_154170399_154170470_154170648_154170712_154172028_154172105_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_10789.known	chr1	-	2108	8	FSM	ENSG00000143549.21	ENST00000330188.13	2108	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2121.41320821758	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCAGACCTATTTGACTT	-154080885	True	NA	-11	True	AATAAA	-17	NA	154183205	154156363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154157722_154170399_154170470_154170648_154170712_154171412_154171489_154172907_154172979_154173083_154173202_154176114_154176249_154182987
transcript_10790.known	chr1	+	3877	27	FSM	ENSG00000143569.19	ENST00000428931.6	3877	27	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_26	250.262043140158	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCAGCCTCTGCCTATTC	154201206	True	NA	7	True	TATAAA	-14	NA	154220954	154270847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234760_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154266500_154266569_154268756_154268955_154270199
transcript_107949.known	chr4	+	619	2	FSM	ENSG00000272677.2	ENST00000609575.2	736	2	117	0	88	0	multi-exon	FALSE	canonical	3	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAGTGACTTTGTTTTC	82374255	False	NA	7	True	ATTAAA	-19	NA	82374401	82384027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82374727_82383733
transcript_107954.known	chr4	+	612	1	FSM	ENSG00000272677.2	ENST00000609552.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGTGTTCGGGTT	82374154	True	NA	15	True	TATAAA	-26	NA	82374300	82374912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82374300_82374900
transcript_107955.known	chr4	-	1089	7	FSM	ENSG00000138668.19	ENST00000514671.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	2864.64989134798	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATGTATTGGCTCTTTT	-82359267	False	NA	30	True	AATAAA	-12	NA	82359639	82353833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82354155_82354894_82355002_82355303_82355402_82356795_82356896_82357312_82357445_82358658_82358821_82359470
transcript_107958.known	chr4	-	1433	10	FSM	ENSG00000152795.18	ENST00000630114.2	1433	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	1196.8167140016	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGCTTTTCTGCGTCAGG	-82429263	True	NA	-26	True	AATAAA	-14	NA	82430408	82424629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82424884_82425562_82425668_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_107968.known	chr4	-	1318	9	FSM	ENSG00000152795.18	ENST00000630827.1	1318	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	897.887068344344	2590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGCTTTTCTGCGTCAG	-82430380	False	NA	26	True	AATAAA	-13	NA	82430399	82424630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247_82429413_82430341
transcript_107991.known	chr4	-	1291	8	FSM	ENSG00000152795.18	ENST00000602300.5	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	2208	junction_1	260.041676408586	20916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTTCTGCGTCAGGT	-82411294	True	NA	-25	True	AATAAA	-15	NA	82429441	82424628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82424884_82426036_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_107992.known	chr4	-	2404	7	FSM	ENSG00000152795.18	ENST00000507721.5	2404	7	0	0	0	0	multi-exon	FALSE	canonical	3	2423	junction_4	208.249583166183	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTGCGTCAGGTACTA	-82411250	True	NA	-21	True	AATAAA	-19	NA	82429397	82424624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82426130_82426462_82426634_82427189_82427305_82427432_82427565_82428017_82428180_82428277_82428447_82429247
transcript_107995.nnic	chr4	+	1743	6	NNC	ENSG00000145293.17	novel	2083	6	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	290.71676938216	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	82419230	True	NA	20	True	AATAAA	-16	NA	82430584	82461087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_82430659_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_107996.known	chr4	+	1874	6	FSM	ENSG00000145293.17	ENST00000509635.5	1874	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	236.86418049169	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTGTGATTAATAAAAGC	82419293	True	NA	-12	True	NA	NA	NA	82430647	82461055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82430885_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_107998.nnic	chr4	+	1581	5	NNC	ENSG00000145293.17	novel	1689	5	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	326.267145143363	268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	82419230	True	NA	20	True	AATAAA	-16	NA	82430584	82461087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_82430769_82451212_82451246_82454721_82454855_82456914_82457039_82459980
transcript_107999.known	chr4	+	1689	5	FSM	ENSG00000145293.17	ENST00000505846.5	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	342.399620326892	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTATATAGGTTCC	82419307	True	NA	20	True	AATAAA	-16	NA	82430661	82461087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82430885_82447919_82448022_82454721_82454855_82456914_82457039_82459980
transcript_108002.known	chr4	+	2083	6	FSM	ENSG00000145293.17	ENST00000273920.8	2083	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_1	99.9391815055537	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTATCATGTGTGTGTT	82419235	True	NA	14	True	AAAACA	-24	NA	82430589	82461177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82430914_82447919_82448022_82451042_82451246_82454721_82454855_82456914_82457039_82459980
transcript_108003.known	chr4	-	3178	8	FSM	ENSG00000249242.8	ENST00000449862.7	3178	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.74791200881019	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTATTTCTTTGTCTCTT	-82561865	True	NA	-5	True	AATAAA	-17	NA	82561988	82483175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_108004.known	chr4	-	3296	8	FSM	ENSG00000249242.8	ENST00000515780.6	3296	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	3.97953950776689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCTCTTACACCA	NA	False	NA	1	True	AATAAA	-23	NA	82562357	82483169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82485720_82490060_82490239_82496067_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82562162
transcript_108008.known	chr4	-	566	7	FSM	ENSG00000249242.8	ENST00000508701.5	566	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.89087250997625	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATCACTCTCTGTGTGGTC	-82561832	True	NA	NA	False	AATGAA	-41	NA	82561955	82490084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82490239_82496078_82496196_82502726_82502795_82502894_82502928_82503058_82503113_82504577_82504668_82561905
transcript_108014.known	chr4	-	4255	27	FSM	ENSG00000138674.17	ENST00000448323.5	4255	27	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_26	173.839942026529	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82891233	False	NA	-5	True	ATTAAA	-13	NA	82891266	82818661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_108016.known	chr4	-	4012	25	FSM	ENSG00000138674.17	ENST00000348405.8	4012	25	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_13	101.334558312223	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880943	True	NA	-4	True	ATTAAA	-14	NA	82891136	82818660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842139_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_108017.known	chr4	-	3596	25	FSM	ENSG00000138674.17	ENST00000505984.5	3596	25	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	139.367613157513	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTCCAAAGAAACATG	-82880955	True	NA	NA	False	NA	NA	NA	82891148	82819043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82842184_82842482_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_108021.known	chr4	-	3687	24	FSM	ENSG00000138674.17	ENST00000513858.5	3687	24	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	159.809574772715	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTGTGTATAGTCTT	-82880960	True	NA	-4	True	ATTAAA	-14	NA	82891153	82818660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_108025.known	chr4	-	1717	12	FSM	ENSG00000138674.17	ENST00000436790.6	1717	12	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_11	82.9622038806062	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGGTTGCCAGCG	-82880991	True	NA	NA	False	AATAAA	-14	NA	82891184	82863210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_108027.known	chr4	-	3909	26	FSM	ENSG00000138674.17	ENST00000311785.11	3909	26	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	192.563066032923	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTATGTGTGTATAGTCT	-82881066	True	NA	-5	True	ATTAAA	-13	NA	82891259	82818661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82819254_82821036_82821109_82824554_82824675_82827368_82827633_82828999_82829059_82844385_82844510_82848803_82848978_82851430_82851605_82853569_82853716_82854902_82855030_82856951_82857131_82857688_82857765_82861630_82861709_82862533_82862573_82863317_82863393_82864361_82864599_82866807_82866961_82867154_82867317_82870324_82870425_82871943_82872087_82874610_82874752_82875726_82875823_82878729_82878929_82880798_82880923_82881857_82881941_82891087
transcript_108042.known	chr4	+	3825	5	FSM	ENSG00000168152.13	ENST00000302236.10	3825	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	12.3592070943083	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGATGTTTGTTTATT	82899217	True	NA	9	True	ATTAAA	-18	NA	82900734	82919969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_82900883_82904735_82904932_82906323_82906628_82907784_82907936_82916943
transcript_108045.nic	chr4	-	1805	5	NIC	ENSG00000251022.6	novel	2770	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_4	52.4309069156733	69	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_82894848_82895691_82895775_82897988_82898063_82900076_82900224_82900371
transcript_108053.nic	chr4	-	1648	3	NIC	ENSG00000251022.6	novel	971	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	9.5	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGAAATGGATGCTACTG	-82896697	True	NA	-48	True	AATAAA	-23	NA	82900569	82893544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_82894848_82900076_82900224_82900371
transcript_108054.known	chr4	-	564	5	FSM	ENSG00000138674.17	ENST00000511975.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	312.983525924289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAATAATTTTGCAACCCC	-82880985	True	NA	NA	False	AATGAA	-22	NA	82891178	82875771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_82875842_82878729_82878929_82880798_82880923_82881857_82881938_82891087
transcript_108057.known	chr4	+	1651	10	FSM	ENSG00000138663.9	ENST00000264389.7	1651	10	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_9	53.6354866865098	1431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAAGAGTATTTTGTTCCC	83029821	True	NA	35	True	AATAAA	-44	NA	83035182	83075818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83075296
transcript_108058.known	chr4	+	1695	11	FSM	ENSG00000138663.9	ENST00000511653.1	1695	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	211.520897312771	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGTTATTCTAATAAAT	83029863	True	NA	-27	True	NA	NA	NA	83035224	83075756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83066437_83066554_83068437_83068523_83073205_83073354_83075296
transcript_108059.known	chr4	+	1702	11	FSM	ENSG00000138663.9	ENST00000503682.5	1702	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	213.812183937212	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTACTTTGTTTTTAGTT	83029845	True	NA	14	True	AATAAA	-23	NA	83035206	83075797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83035299_83045625_83045706_83049165_83049318_83049880_83049985_83056925_83057080_83057257_83057409_83063075_83063247_83065059_83065156_83066437_83066554_83068437_83068523_83075296
transcript_108060.known	chr4	-	786	5	FSM	ENSG00000145287.11	ENST00000411416.6	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	2.48746859276655	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTCATGCTTCTTTGC	-83109741	True	NA	NA	False	TATAAA	-25	NA	83109843	83090687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83090972_83094677_83094792_83104895_83105021_83107803_83107951_83109727
transcript_108063.known	chr4	-	4581	12	FSM	ENSG00000173083.16	ENST00000311412.10	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	5.28212328957598	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTATGACTATTCTTTT	-83334580	True	NA	NA	False	AATAAA	-20	NA	83334848	83292460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83313113_83313288_83319343_83319470_83322218_83322365_83334555
transcript_108064.known	chr4	-	1458	11	FSM	ENSG00000173083.16	ENST00000513463.1	1458	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	7.44378935757857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATATACTAGTCCT	-83334514	True	NA	-27	True	AAGAAA	-26	NA	83334782	83295343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83295504_83300959_83301107_83302149_83302269_83306202_83306318_83308844_83308952_83309401_83309496_83310030_83310079_83310721_83310891_83319343_83319470_83322218_83322365_83334555
transcript_108065.nnic	chr4	-	572	3	NNC	ENSG00000173083.16	novel	932	3	NA	NA	-29	-265	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	10	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTTGGTTTTTTTT	-83334609	True	NA	NA	False	NA	NA	NA	83334877	83319194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_83319470_83322218_83322268_83334629
transcript_108066.known	chr4	-	932	3	FSM	ENSG00000173083.16	ENST00000680713.1	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGAGGGCCCTGAGTCA	-83334533	True	NA	NA	False	NA	NA	NA	83334801	83318929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83319470_83322218_83322365_83334555
transcript_108070.known	chr4	-	744	2	FSM	ENSG00000163312.11	ENST00000440639.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCTTACTGAATTACA	-83454004	True	NA	NA	False	AAAACA	-21	NA	83455823	83453756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83453946_83455268
transcript_108071.nic	chr4	-	1334	2	ISM	ENSG00000163312.11	ENST00000510985.1	3315	17	-151	45817	-119	530	5prime_fragment	FALSE	canonical	3	52	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCATAATATTAGTGCAA	-83455963	False	NA	-7	True	AATAAA	-19	NA	83455974	83453189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_83453946_83455396
transcript_108072.known	chr4	-	3543	18	FSM	ENSG00000163312.11	ENST00000295488.8	3543	18	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_12	9.96429612325095	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACGAATAATGTTTGA	-83454004	True	NA	2	True	TATAAA	-30	NA	83455823	83407345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83407561_83416730_83416866_83418092_83418207_83421562_83421737_83425993_83426093_83427562_83427721_83429523_83429747_83431663_83431769_83432125_83432268_83436857_83437098_83439862_83440009_83441304_83441404_83443516_83443615_83446013_83446087_83446834_83447036_83448782_83448962_83453230_83453946_83455396
transcript_108079.known	chr4	+	1550	6	FSM	ENSG00000163319.11	ENST00000295491.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	1627	junction_3	202.584895784459	6597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTTGTGAAGTAAATGC	83438958	True	NA	6	True	AATAAA	-21	NA	83456057	83462298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908_83456959_83458345_83458430_83459739_83459798_83460972_83461033_83461120
transcript_108084.known	chr4	-	682	6	FSM	ENSG00000163322.14	ENST00000511801.1	682	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	56.6483892092264	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGTTGGCCAGTCACT	-83481031	True	NA	NA	False	TATAAA	-12	NA	83485103	83470202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83483991_83484167_83484985
transcript_108092.known	chr4	+	666	5	FSM	ENSG00000163319.11	ENST00000507019.5	666	5	0	0	0	0	multi-exon	TRUE	canonical	3	372	junction_2	732.705389293678	1386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGATCCCCAAATAGCT	83438883	True	NA	25	True	AATAAA	-26	NA	83455982	83461423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908_83456959_83459739_83459798_83460972_83461033_83461120
transcript_108093.known	chr4	+	350	4	FSM	ENSG00000163319.11	ENST00000507349.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	916.268277064941	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTATGATGCCAATA	83438955	True	NA	29	True	AATAAA	-40	NA	83456054	83461237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908_83456959_83460972_83461033_83461120
transcript_108094.known	chr4	+	2482	2	FSM	ENSG00000163319.11	ENST00000512375.1	2482	2	0	0	0	0	multi-exon	FALSE	canonical	3	2153	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	83438832	True	NA	NA	False	AGTAAA	-9	NA	83455931	83459144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83456178_83456908
transcript_108095.known	chr4	-	4210	9	FSM	ENSG00000163322.14	ENST00000321945.12	4210	9	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	9.52627944162882	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCATTCAATGGTAAATC	-83481028	True	NA	-9	True	ATTAAA	-18	NA	83485100	83459516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83472221_83472289_83476642_83476680_83482153_83482245_83484985
transcript_108096.known	chr4	-	2718	8	FSM	ENSG00000163322.14	ENST00000475656.6	2718	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	44.6820970402953	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAATGTCAATATTTAAA	-83481031	True	NA	-17	True	AATAAA	-17	NA	83485103	83460944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_83462903_83463493_83463609_83467453_83467539_83469031_83469152_83470202_83470397_83476642_83476680_83482153_83482245_83484985
transcript_108097.known	chr4	+	2928	12	FSM	ENSG00000138678.11	ENST00000264409.5	2928	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.7393671224217	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGCATTATTCCCC	NA	False	NA	NA	False	AATAAA	-16	NA	83536107	83605875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_83536764_83544535_83544603_83581561_83581833_83587254_83587330_83588209_83588300_83590198_83590293_83594844_83594961_83596857_83596914_83597429_83597516_83598050_83598180_83598643_83598724_83604667
transcript_108100.known	chr4	+	3241	5	FSM	ENSG00000180769.10	ENST00000318186.8	3241	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACATACTTTCTCTACT	84966704	False	NA	-11	True	AATAAA	-2	NA	84966934	85008729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_84967128_84969724_84969877_85000690_85000766_85004229_85004328_85006006
transcript_108102.known	chr4	+	3270	4	FSM	ENSG00000180769.10	ENST00000652207.2	3270	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATACTTTCTCTACTGT	NA	False	NA	-9	True	AATAAA	-4	NA	84965563	85008731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_84965859_84969724_84969877_85004229_85004328_85006006
transcript_108105.known	chr4	+	3314	4	FSM	ENSG00000180769.10	ENST00000652490.2	3314	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.49443825784929	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCTCTACTGTTTTC	84966562	True	NA	-5	True	AATAAA	-8	NA	84966792	85008735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_84967128_84969724_84969877_85004229_85004328_85006006
transcript_108107.nnic	chr4	+	536	3	NNC	ENSG00000180769.10	novel	3270	4	NA	NA	-1	-16248	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTTAATAGCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	84965562	84970727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_84965859_84969724_84969877_84970639
transcript_108112.nnic	chr4	+	657	3	NNC	ENSG00000180769.10	novel	3314	4	NA	NA	-37	-16248	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	1.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTCTTAATAGCATTT	84966682	False	NA	NA	False	AATAAA	-19	NA	84966710	84970727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_84967128_84969724_84969877_84970639
transcript_108115.known	chr4	+	2740	8	FSM	ENSG00000138639.18	ENST00000395183.6	2740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.67819144635296	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGCTGTGCTGTTTG	85778639	True	NA	NA	False	ATTAAA	-13	NA	85778705	86001223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_85778966_85923647_85923771_85942065_85942274_85972035_85972169_85974887_85974962_85977569_85977692_85994582_85995658_86000478
transcript_108118.known	chr4	+	485	2	FSM	ENSG00000138639.18	ENST00000505856.1	485	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATTTTAATATTTACTAA	85475423	False	NA	NA	False	AATAAA	-43	NA	85475485	85570932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_85475560_85570521
transcript_108121.known	chr4	-	3319	3	FSM	ENSG00000109339.24	ENST00000641022.1	3319	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAGCAAAAAAAAAAAAAAA	-86359949	True	NA	NA	False	ACTAAA	-8	NA	86360051	86191597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86194408_86354529_86354645_86359657
transcript_108126.known	chr4	+	480	3	FSM	ENSG00000172493.23	ENST00000511996.5	480	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTAATTCTTTTTCTTTT	86927016	True	NA	NA	False	AAAACA	-38	NA	86935073	86974068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_86935241_86948497_86948572_86973829
transcript_108135.known	chr4	+	1486	7	FSM	ENSG00000172493.23	ENST00000507468.5	1486	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	28.181948517131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAGTAAGTAAATTTGAA	86926953	True	NA	NA	False	NA	NA	NA	86935010	87091824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_86935241_86948497_86948572_87046165_87046287_87046694_87047595_87084122_87084165_87089983_87090071_87091792
transcript_108141.known	chr4	-	1610	5	FSM	ENSG00000163633.12	ENST00000462714.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.17944947177034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCATGATTTATATTC	-86892270	True	NA	NA	False	AATAAA	-23	NA	86892410	86886796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86887894_86888120_86888276_86890047_86890139_86891455_86891594_86892281
transcript_108148.known	chr4	-	766	4	FSM	ENSG00000163633.12	ENST00000506308.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCATCTAAATGACAGTC	-86892276	True	NA	NA	False	NA	NA	NA	86892416	86887774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86887894_86888120_86888276_86891455_86891594_86892062
transcript_108158.known	chr4	-	898	4	FSM	ENSG00000284968.1	ENST00000506484.1	898	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.73488351136175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATATAGTCAAAGAA	-86935950	True	NA	NA	False	AAAAAG	-9	NA	86936179	86925866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86926327_86932221_86932320_86933394_86933543_86935987
transcript_108165.nic	chr4	-	1017	3	NIC	ENSG00000284968.1	novel	2158	4	NA	NA	-365	-12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAAAAAAAGATGAT	-86934678	False	NA	NA	False	NA	NA	NA	86934907	86925878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_86926327_86933394_86933543_86934486
transcript_108166.nic	chr4	-	793	3	ISM	ENSG00000285458.1	ENST00000503001.5	708	5	-6	37739	-6	-37739	5prime_fragment	FALSE	canonical	1	1	junction_1	6.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAAAAAAAGATGAT	-86935955	True	NA	NA	False	NA	NA	NA	86936184	86925878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_86926327_86933394_86933543_86935987
transcript_108169.nnic	chr4	-	732	2	NIC	ENSG00000284968.1	novel	2158	4	NA	NA	-72	-15	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGGAAAAAAAAAGAT	NA	False	NA	NA	False	NA	NA	NA	86936274	86925881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_86926327_86935987
transcript_108170.known	chr4	-	434	2	FSM	ENSG00000284968.1	ENST00000509262.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCCAGTGAGTTATTATTA	-86934313	False	NA	NA	False	AATAAA	-12	NA	86934542	86933164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_86933543_86934486
transcript_108175.known	chr4	-	5631	10	FSM	ENSG00000145332.14	ENST00000273963.10	5631	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	6.53386241243963	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTCTAAAAGGTCTGT	-87219677	True	NA	-9	True	ATTAAA	-29	NA	87220618	87160102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87185250_87185800_87195323_87195691_87220417
transcript_108177.known	chr4	-	4049	9	FSM	ENSG00000145332.14	ENST00000425278.6	4049	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	12.6484929932384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATAAAAAAGCAGAATCAA	-87219584	True	NA	NA	False	NA	NA	NA	87220525	87161042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87163643_87163877_87164080_87170078_87170239_87170446_87170616_87176756_87176869_87178476_87178621_87183202_87183390_87195323_87195691_87220417
transcript_108191.known	chr4	-	1782	7	FSM	ENSG00000198189.11	ENST00000358290.9	1782	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	8.47873156131794	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGATGTGAGGCTCA	-87389267	True	NA	91	True	AATAAA	-30	NA	87391188	87336514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87374698_87374831_87382254_87382363_87390860
transcript_108196.known	chr4	-	851	6	FSM	ENSG00000198189.11	ENST00000507286.1	851	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.1349163019538	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCTAGTTTTCTGAAAACT	-87389228	True	NA	NA	False	TATAAA	-17	NA	87391149	87337274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_87337367_87340489_87340607_87357278_87357417_87372708_87372816_87382254_87382363_87390860
transcript_108204.nic	chr4	+	1378	8	NIC	ENSG00000170502.13	novel	2820	8	NA	NA	-61	429	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	111.876207096441	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTTCATCTAGTTCT	NA	False	NA	9	True	AATAAA	-24	NA	87422511	87458347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_87422618_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_108208.known	chr4	+	2820	8	FSM	ENSG00000170502.13	ENST00000302174.9	2820	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	48.2108464381794	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTGTGAATTTTAAAC	87419803	True	NA	3	True	AATAAA	-18	NA	87422572	87459455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87423013_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_108212.known	chr4	+	2458	8	FSM	ENSG00000170502.13	ENST00000473942.5	2458	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	116.637411297944	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATGTGTGAATTTTAAA	87419827	True	NA	2	True	AATAAA	-17	NA	87422596	87459454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87422676_87434980_87435221_87438276_87438373_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_108217.known	chr4	+	951	7	FSM	ENSG00000170502.13	ENST00000440591.6	951	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	131.720664033148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAAGCTTTATGCCAGTC	87420039	False	NA	NA	False	NA	NA	NA	87422808	87457918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87423013_87434980_87435221_87441828_87441916_87449141_87449254_87451588_87451736_87454370_87454456_87457842
transcript_108223.nic	chr4	-	1180	6	ISM	ENSG00000152583.13	ENST00000503414.5	2520	12	38178	-83	37705	0	3prime_fragment	FALSE	canonical	3	12	junction_2	2.68328157299975	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	-87490747	True	NA	NA	False	AATAAA	-20	NA	87490914	87473334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490272_87490394_87490759
transcript_108225.nnic	chr4	-	1005	5	NIC	ENSG00000152583.13	novel	2778	11	NA	NA	37759	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	5.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	-87490693	True	NA	NA	False	AATAAA	-20	NA	87490860	87473334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_87473804_87479429_87479579_87480371_87480521_87482423_87482561_87490759
transcript_108227.nnic	chr4	-	1031	5	NIC	ENSG00000152583.13	novel	2778	11	NA	NA	37705	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	6.83739716558867	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTATGCAAGTGTATTTC	-87490747	True	NA	NA	False	AATAAA	-20	NA	87490914	87473334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_87473804_87479429_87479579_87482423_87482561_87490272_87490394_87490759
transcript_108236.known	chr4	+	5089	15	FSM	ENSG00000118762.8	ENST00000237596.7	5089	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	41.2582706612769	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGAGAGTTGTCTGTTT	88005046	True	NA	8	True	AATAAA	-18	NA	88007634	88077777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88008329_88019457_88019572_88036219_88036354_88038250_88038502_88043232_88043458_88046641_88046871_88051990_88052159_88056085_88056268_88057982_88058104_88061905_88062005_88065373_88065496_88065761_88065880_88067897_88068062_88074811_88074960_88075457
transcript_108239.known	chr4	+	1561	7	FSM	ENSG00000118785.15	ENST00000395080.8	1561	7	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	67.5074070010099	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATGTTTTTAAAGGTTT	87974552	True	NA	17	True	AATAAA	-23	NA	87975713	87983411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87980392_87980435_87981474_87981799_87982491
transcript_108240.known	chr4	+	1581	6	FSM	ENSG00000118785.15	ENST00000237623.11	1581	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_4	106.26306978438	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTATTTTGGTTTCAATT	87974505	True	NA	32	True	AATAAA	-38	NA	87975666	87983426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980045_87980127_87981474_87981799_87982491
transcript_108241.known	chr4	+	1196	6	FSM	ENSG00000118785.15	ENST00000360804.4	1196	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	158.6071877312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAACTATCACTGTAT	87974552	True	NA	NA	False	ACTAAA	-38	NA	87975713	87983127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_87975801_87976881_87976950_87977058_87977098_87980392_87980435_87981474_87981799_87982491
transcript_108242.known	chr4	-	4206	16	FSM	ENSG00000118777.12	ENST00000237612.8	4206	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	7.89767898393783	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTTTATGTATTCTTT	-88158610	False	NA	NA	False	AATAAA	-17	NA	88158639	88090268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88158385
transcript_108244.nic	chr4	-	2205	16	NIC	ENSG00000118777.12	novel	4206	16	NA	NA	-33	-1899	combination_of_known_junctions	FALSE	canonical	3	6	junction_15	8.365006475391	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTTTTTTTGTTGTTTT	NA	False	NA	-2	True	CATAAA	-29	NA	88159356	88092167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_88092382_88094576_88094660_88095519_88095610_88097452_88097608_88099323_88099449_88101229_88101320_88107183_88107267_88113302_88113554_88114956_88115059_88118108_88118261_88121634_88121793_88131060_88131214_88131802_88131918_88132575_88132636_88139792_88140015_88159204
transcript_108249.known	chr4	-	6309	7	FSM	ENSG00000163644.15	ENST00000608933.6	6309	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	5.4594464513864	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAAAAATCCAACTGTGT	-88283510	True	NA	-11	True	AATAAA	-18	NA	88284561	88257619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88278143_88278643_88284405
transcript_108251.known	chr4	-	923	6	FSM	ENSG00000163644.15	ENST00000508256.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	10.4690018626419	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCTGTGCAACAGTTTT	-88283580	True	NA	NA	False	NA	NA	NA	88284631	88262576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88262727_88265000_88265136_88268189_88268335_88268740_88268907_88277142_88277244_88284405
transcript_108254.known	chr4	+	3776	23	FSM	ENSG00000138642.16	ENST00000264346.12	3776	23	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	6.40699514412642	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGCATGTCGCTCAATT	NA	False	NA	30	True	AATAAA	-20	NA	88378851	88443097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88379121_88383220_88383381_88385498_88385576_88390651_88390880_88393487_88393583_88396014_88396143_88396850_88396988_88398141_88398210_88404875_88404998_88405553_88405614_88408523_88408618_88413076_88413267_88417424_88417580_88423859_88423974_88424594_88424703_88428579_88428751_88431161_88431306_88435724_88435892_88436904_88436972_88437710_88437782_88439873_88440058_88440147_88440251_88442233
transcript_108269.nnic	chr4	-	1228	5	Antisense	novelGene_ENSG00000138642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_4	6.41774882649672	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCAGTGATTTTGCT	-88456733	True	NA	-12	True	AATAAA	-14	NA	88456910	88415385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88416080_88419301_88419409_88419573_88419700_88420355_88420412_88456665
transcript_108271.nnic	chr4	-	1247	5	Antisense	novelGene_ENSG00000138642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_4	5.06828373317832	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCAGTGATTTTGCT	-88456735	True	NA	-12	True	AATAAA	-14	NA	88456912	88415385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88416080_88419301_88419409_88419573_88419700_88420355_88420429_88456665
transcript_108275.nnic	chr4	-	1172	5	Antisense	novelGene_ENSG00000138642.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	6.49519052838329	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTCAGTGATTTTGCT	-88456647	True	NA	-12	True	AATAAA	-14	NA	88456824	88415385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_88416080_88419301_88419409_88419573_88419713_88420355_88420429_88456665
transcript_108283.nnic	chr4	-	762	3	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	526.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88513279	True	NA	-16	True	AATAAA	-30	NA	88523764	88520997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_88521383_88521919_88522030_88523497
transcript_108285.known	chr4	-	1311	2	FSM	ENSG00000145337.5	ENST00000273968.5	1311	2	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88513291	True	NA	-16	True	AATAAA	-30	NA	88523776	88520997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88522030_88523497
transcript_108286.nnic	chr4	-	1389	2	NNC	ENSG00000145337.5	novel	1311	2	NA	NA	-9549	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTTGCAGTAGTCGTTT	-88533234	False	NA	-16	True	AATAAA	-30	NA	88533325	88520997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_88522030_88532968
transcript_108287.known	chr4	+	235	2	FSM	ENSG00000285122.1	ENST00000597259.2	235	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATGTTTATATTTTCAA	88523835	True	NA	NA	False	NA	NA	NA	88523855	88524913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88523933_88524755
transcript_108288.known	chr4	+	326	2	FSM	ENSG00000285122.1	ENST00000598772.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTAATTTTTTGTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	88523825	88524983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_88523933_88524764
transcript_108289.known	chr4	-	1917	1	FSM	ENSG00000177432.8	ENST00000323061.7	1917	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAGACTCGGTACTGT	-88697216	True	NA	NA	False	AATAAA	-22	NA	88697829	88695912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88695900_88697800
transcript_10830.known	chr1	-	1610	6	FSM	ENSG00000143612.21	ENST00000350592.7	1610	6	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_5	166.206377735633	2163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209568	True	NA	-18	True	AATAAA	-22	NA	154220624	154206719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154220341
transcript_108301.known	chr4	-	2762	5	FSM	ENSG00000138640.15	ENST00000509094.5	2762	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.9849495089392	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGCCTTAAGTATTT	-89054508	True	NA	NA	False	AATAAA	-1	NA	89057162	88936282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_108308.nnic	chr4	-	1395	5	NNC	ENSG00000138640.15	novel	2206	5	NA	NA	-5	2970	intron_retention	FALSE	canonical	3	5	junction_1	33.0785051052795	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGAGTAATGTTTAAGA	-89054536	True	NA	NA	False	AATAAA	-21	NA	89057190	88986653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_88987218_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_10831.known	chr1	-	1678	7	FSM	ENSG00000143612.21	ENST00000368521.10	1678	7	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_6	226.214315786306	1988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209534	True	NA	-18	True	AATAAA	-22	NA	154220590	154206719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_108310.known	chr4	-	2206	5	FSM	ENSG00000138640.15	ENST00000515600.1	2206	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_4	32.2984132737198	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	NA	False	NA	-12	True	AATAAA	-8	NA	89057345	88989623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937_89056989_89057117
transcript_108311.nic	chr4	-	997	4	ISM	ENSG00000138640.15	ENST00000512339.5	1511	6	-40	82531	-5	-1615	5prime_fragment	FALSE	canonical	3	14	junction_1	33.95094500403	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAATAGCAATTTTATGT	-89054536	True	NA	NA	False	ATTAAA	-27	NA	89057190	88937897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_88938242_89020459_89020670_89029459_89029650_89056937
transcript_108313.nic	chr4	-	2180	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	155	0	-5	0	intron_retention	FALSE	canonical	3	60	junction_3	16.391054470859	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAACCTGTTTTGTTCT	-89054536	True	NA	-12	True	AATAAA	-8	NA	89057190	88989623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
transcript_108316.nic	chr4	-	1060	4	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	155	1120	-5	-1120	intron_retention	FALSE	canonical	3	60	junction_3	16.391054470859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTAAAAATCTGGAAATA	-89054536	True	NA	NA	False	AATAAA	-12	NA	89057190	88990743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_88991151_89020459_89020670_89029459_89029650_89056937
transcript_108317.known	chr4	-	5866	24	FSM	ENSG00000138640.15	ENST00000264344.10	5866	24	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_17	16.470286013335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCATAAGTACTTTTATT	-89054531	True	NA	NA	False	ATTAAA	-17	NA	89057185	88725959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_88728660_88731326_88731429_88732001_88732199_88737471_88737556_88739029_88739126_88746931_88747016_88747630_88747852_88748951_88749034_88749770_88749910_88750423_88750638_88758753_88758902_88767552_88767596_88767982_88768060_88781164_88781352_88787752_88787933_88790585_88790628_88805010_88805053_88851019_88851184_88906378_88906463_88938087_88938242_88990972_88991151_89020459_89020670_89029459_89029650_89056937
transcript_10832.known	chr1	-	1551	5	FSM	ENSG00000143612.21	ENST00000362076.8	1551	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	351.848244986386	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGAATCAGTCCTTTAT	-154209563	True	NA	-18	True	AATAAA	-22	NA	154220619	154206719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154207649_154212319_154212379_154212457_154212625_154214456_154214575_154220341
transcript_108323.nic	chr4	-	831	3	ISM	ENSG00000138640.15	ENST00000515600.1	2206	5	155	30658	-5	248	intron_retention	FALSE	canonical	3	60	junction_2	18.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGGCAGAAAAAAAAAAACC	-89054536	True	NA	NA	False	NA	NA	NA	89057190	89020281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_89020670_89029459_89029650_89056937
transcript_108326.nnic	chr4	-	399	2	NNC	ENSG00000138640.15	novel	5866	24	NA	NA	7	-35808	intron_retention	FALSE	canonical	2	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTCTGGAGTTTTAGA	-89054524	True	NA	NA	False	AATAAA	-33	NA	89057178	89056337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_89056496_89056937
transcript_108327.known	chr4	+	3186	2	FSM	ENSG00000180346.5	ENST00000603357.3	3186	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAACTTCCAAATTGAAA	89110813	True	NA	35	True	AATAAA	-29	NA	89111532	89114901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89111884_89112066
transcript_10833.known	chr1	-	1278	6	FSM	ENSG00000143612.21	ENST00000368518.5	1278	6	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_5	242.765236391045	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATAGTTTTTCAGCACA	-154209477	True	NA	-3	True	AATAAA	-28	NA	154220533	154211733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154212379_154212457_154212625_154213892_154213947_154214456_154214575_154219835_154219938_154220341
transcript_10834.known	chr1	+	3451	25	FSM	ENSG00000143569.19	ENST00000613315.4	3451	25	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_5	279.913525213095	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCGTTCTTTCCGTGCA	154201100	True	NA	26	True	AATAAA	-23	NA	154220848	154263505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154220976_154225083_154225214_154227281_154227360_154228614_154228726_154234590_154234739_154235195_154235292_154236565_154236612_154237023_154237137_154241512_154241566_154243216_154243303_154246203_154246376_154249238_154249438_154251040_154251319_154251480_154251654_154253899_154254090_154254835_154254891_154255151_154255327_154255682_154255756_154257062_154257259_154257345_154257435_154258976_154259031_154259947_154260030_154260891_154261110_154261591_154261698_154263102
transcript_108350.known	chr4	+	2010	3	FSM	ENSG00000251095.8	ENST00000513572.3	2019	3	7	2	7	-2	multi-exon	FALSE	canonical	3	46	junction_2	13	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCACCTTGAACTTTATT	89678223	True	NA	8	True	AATAAA	-18	NA	89681511	89694130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89681685_89691284_89691406_89692414
transcript_108352.nic	chr4	+	781	3	FSM	ENSG00000251095.8	ENST00000691837.1	648	3	-133	0	-133	0	multi-exon	FALSE	canonical	2	38	junction_2	17	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	NA	False	NA	7	True	AATAAA	-18	NA	89681371	89720172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89681685_89691284_89691406_89719825
transcript_108356.nic	chr4	+	303	2	ISM	ENSG00000251095.8	ENST00000513572.3	2019	3	-51	2776	-51	-17	5prime_fragment	FALSE	canonical	3	72	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGCTTCCAGAGAATGC	89678165	True	NA	9	True	AATAAA	-21	NA	89681453	89691356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_89681685_89691284
transcript_108357.nnic	chr4	+	660	2	FSM	ENSG00000251095.8	ENST00000689416.1	527	2	-133	0	-133	0	multi-exon	FALSE	canonical	2	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGGTTCAAGTGGTTTT	NA	False	NA	7	True	AATAAA	-18	NA	89681371	89720172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89681685_89719825
transcript_108358.known	chr4	+	2422	2	FSM	ENSG00000251095.8	ENST00000612706.1	2422	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCATTTTCATATCTGGC	89678234	True	NA	NA	False	CATAAA	-16	NA	89681522	89686704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89681685_89684444
transcript_108361.nnic	chr4	+	1320	2	NIC	ENSG00000251095.8	novel	2422	2	NA	NA	-88	15	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGACTCTTCTACTAGAT	NA	False	NA	NA	False	AATAAA	-25	NA	89681416	89686464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_89681685_89685412
transcript_108365.known	chr4	+	1703	3	FSM	ENSG00000251095.8	ENST00000659714.1	1703	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGACTTGGAATTATG	89490760	True	NA	NA	False	AATAAA	-10	NA	89490948	89686449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_89491495_89587820_89587941_89685412
transcript_108367.known	chr4	-	905	6	FSM	ENSG00000145335.17	ENST00000508895.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	113.284420817692	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTTTAATGATACTG	-89836097	False	NA	67	True	NA	NA	NA	89836213	89726257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836126
transcript_108368.known	chr4	-	1420	6	FSM	ENSG00000145335.17	ENST00000394986.5	1420	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	97.034014654656	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTATCCCATCTC	-89835604	True	NA	0	True	AATAAA	-23	NA	89837139	89726052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89836742
transcript_108369.known	chr4	-	570	6	FSM	ENSG00000145335.17	ENST00000506244.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	98.2213826007352	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAAGTGCTCAGTTCCA	-89835633	True	NA	NA	False	NA	NA	NA	89837168	89726576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89837097
transcript_10837.known	chr1	+	842	7	FSM	ENSG00000143575.15	ENST00000447768.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	248.544876341387	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTATTCCTGGGACGT	154266801	True	NA	NA	False	NA	NA	NA	154272619	154275663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273535_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_108370.known	chr4	-	3041	6	FSM	ENSG00000145335.17	ENST00000336904.7	3041	6	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_5	99.8050098942934	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTTGGTTTCTGCCTCC	-89838199	True	NA	NA	False	AATAAA	-21	NA	89838315	89724098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89726661_89729193_89729278_89822245_89822389_89828142_89828185_89835546_89835693_89838251
transcript_10838.known	chr1	+	1151	7	FSM	ENSG00000143575.15	ENST00000483970.6	1151	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	247.433099824758	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTGTCTTGGTTTTG	154266790	True	NA	27	True	AATAAA	-16	NA	154272608	154275873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273599_154273749_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_108383.known	chr4	-	731	3	FSM	ENSG00000145335.17	ENST00000502987.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTATAGTGACATCATCTC	-89835579	False	NA	NA	False	AATAAA	-17	NA	89835695	89821848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_89822389_89828142_89828185_89835546
transcript_108385.nnic	chr4	-	919	2	Intergenic	novelGene_47	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	160	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGATGATACATGAAGCA	-92263813	False	NA	-15	True	AATAAA	-19	NA	92263832	92257680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr4_-_92257958_92263190
transcript_108393.nnic	chr4	-	816	4	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-376	10419	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	462.169521568295	71	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTCTATATATTTT	-92277433	False	NA	-4	True	ATTAAA	-18	NA	92277451	92258347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_92258483_92263190_92263356_92269242_92269357_92277049
transcript_108398.nnic	chr4	-	694	3	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-376	5589	at_least_one_novel_splicesite	FALSE	canonical	3	955	junction_1	50.5	767	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGCAGACATCTCCT	-92277433	False	NA	-13	True	ATTAAA	-16	NA	92277451	92263177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_92263356_92269242_92269357_92277049
transcript_108401.nnic	chr4	-	575	2	NNC	ENSG00000249152.1	novel	616	2	NA	NA	-386	-1535	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAAGATGATTTTTT	-92277443	False	NA	-4	True	ATTAAA	-18	NA	92277461	92270301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_92270465_92277049
transcript_108410.nnic	chr4	+	1035	4	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137139	-438249	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.3360653902262	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGCAGTTGACATTCCTT	92441780	False	NA	NA	False	AATAAA	-22	NA	92441795	92673998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_92442311_92590130_92590287_92670425_92670466_92673674
transcript_108416.nnic	chr4	+	4313	2	NNC	ENSG00000152208.13	novel	5783	16	NA	NA	137139	-518319	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAAAACGTATATGG	92441780	False	NA	NA	False	GATAAA	-9	NA	92441795	92593928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_92442311_92590130
transcript_108417.known	chr4	+	5783	16	FSM	ENSG00000152208.13	ENST00000282020.9	5783	16	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	13.611106575963	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTGAAGTCTTAACTG	92303931	True	NA	22	True	AATAAA	-24	NA	92303965	93774566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_92304745_92590130_92590287_93084994_93085280_93110747_93110954_93207403_93207458_93216737_93216912_93224613_93224776_93238370_93238491_93395606_93395709_93422770_93422969_93455661_93455975_93490638_93490778_93515215_93515412_93626268_93626436_93769209_93769451_93772075
transcript_108418.known	chr4	-	592	3	FSM	ENSG00000248511.1	ENST00000504213.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTTTATAGATTTTT	-92304052	False	126	NA	False	AATAAA	-15	NA	92304178	92297250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_92297630_92300798_92300886_92304052
transcript_108420.known	chr4	+	2212	1	FSM	ENSG00000172238.6	ENST00000306011.6	2212	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTTGTCACTTATTC	93828718	True	NA	NA	False	AATAAA	-10	NA	93828752	93830964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_93828800_93831000
transcript_108423.known	chr4	+	4649	24	FSM	ENSG00000163104.18	ENST00000457823.6	4649	24	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	47.6989218490068	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGTTAATTTTTGGAAA	94207790	False	NA	6	True	AATAAA	-18	NA	94207844	94290821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278922_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_108425.known	chr4	+	5094	24	FSM	ENSG00000163104.18	ENST00000354268.9	5094	24	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	41.8771269527262	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTATTTTCACACCCTTT	94204705	True	NA	15	True	AATAAA	-18	NA	94207864	94291292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951_94237019_94240905_94241007_94249653_94249756_94250751_94250834_94252615_94253008_94264706_94264907_94270727_94270819_94273616_94273717_94274737_94274798_94274889_94274966_94276338_94276475_94277021_94277160_94278421_94278518_94278615_94278734_94278928_94279051_94280591_94280781_94281471_94281591_94283120_94283304_94284959_94285070_94289472
transcript_10843.known	chr1	+	1109	7	FSM	ENSG00000143575.15	ENST00000328703.12	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_2	40.0277681394082	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	154266810	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_108430.nic	chr4	+	1284	5	ISM	ENSG00000163104.18	ENST00000359052.8	5017	24	-13	53779	-13	-36189	5prime_fragment	FALSE	canonical	3	119	junction_1	41.5240893939891	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATCACCTGACCCTA	94207586	False	NA	NA	False	ACTAAA	-11	NA	94207597	94237511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_94207736_94208345_94208585_94226118_94226297_94233953_94234123_94236951
transcript_108432.nic	chr4	+	1357	5	ISM	ENSG00000163104.18	ENST00000510105.5	2409	17	-6	39648	-5	-36189	5prime_fragment	FALSE	canonical	3	129	junction_1	37.2223051408695	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAATCACCTGACCCTA	94204700	True	NA	NA	False	ACTAAA	-11	NA	94207859	94237511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_94208071_94208345_94208585_94226118_94226297_94233953_94234123_94236951
transcript_108436.known	chr4	+	6043	13	FSM	ENSG00000163110.15	ENST00000317968.9	6043	13	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_8	17.6231776047593	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGCTCTCCTTTTTGTTGT	94448321	True	NA	12	True	AATAAA	-23	NA	94451941	94668223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_108440.known	chr4	+	2979	13	FSM	ENSG00000163110.15	ENST00000542407.5	2979	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	41.0385997162021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGAGAGAGAGAAT	94448335	True	NA	NA	False	NA	NA	NA	94451955	94665500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575942_94576035_94585564_94585738_94586407_94586445_94618003_94618192_94640275_94640451_94654459_94654641_94657426_94657548_94662421_94662538_94663977
transcript_108443.nic	chr4	+	1399	8	NIC	ENSG00000163110.15	novel	2020	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	55.0787932818771	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATAGAAAAT	94448236	True	NA	NA	False	NA	NA	NA	94451856	94587286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350_94573394_94575615_94576035_94585564_94585738_94586407_94586445_94586988
transcript_108446.nnic	chr4	+	632	4	NNC	ENSG00000163110.15	novel	2020	9	NA	NA	0	-14	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	82.1259195788191	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCATATTTGTATAATGAT	94448236	True	NA	5	True	AATAAA	-16	NA	94451856	94549972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549769
transcript_108447.nic	chr4	+	622	4	NIC	ENSG00000163110.15	novel	2020	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	72.2403396079134	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	94448236	True	NA	19	True	AATAAA	-30	NA	94451856	94549986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_94451996_94455246_94455385_94523723_94523876_94549793
transcript_108448.known	chr4	+	743	4	FSM	ENSG00000163110.15	ENST00000509333.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	6.23609564462324	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTCTTTAATAACATTTT	94448307	True	NA	NA	False	AATAAA	-30	NA	94451927	94573735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94523723_94523876_94573350
transcript_10845.known	chr1	+	914	7	FSM	ENSG00000143575.15	ENST00000457918.6	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	221.147512358205	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGGGCTTGGATATGTG	154266770	True	NA	-62	True	NA	NA	NA	154272588	154275784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273479_154273599_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_108450.known	chr4	+	1189	3	FSM	ENSG00000163110.15	ENST00000359265.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	83	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAACGGAGTCTCCT	94448265	True	NA	2	True	ATTAAA	-16	NA	94451885	94457184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94451996_94455246_94455385_94456243
transcript_108453.nic	chr4	+	936	3	ISM	ENSG00000163110.15	ENST00000509333.5	743	4	-71	49353	0	-25604	5prime_fragment	FALSE	canonical	3	169	junction_1	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGTGTAT	94448236	True	NA	NA	False	NA	NA	NA	94451856	94524382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_94451996_94455246_94455385_94523723
transcript_108454.known	chr4	+	463	3	FSM	ENSG00000163110.15	ENST00000511767.3	463	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	79	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGATTTACAGAATAGAAA	94455243	True	NA	19	True	AATAAA	-30	NA	94455266	94549986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_94455385_94523723_94523876_94549793
transcript_108460.nnic	chr4	-	1606	7	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_4	30.5650490302604	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-97136788	True	NA	NA	False	NA	NA	NA	97141397	97107373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97107819_97108320_97108476_97110176_97110427_97111212_97111426_97134546_97134736_97139504_97139759_97141297
transcript_108465.nnic	chr4	-	1593	6	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	36.8477950493649	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGAGTTTTCTTGGGT	-97136787	True	NA	NA	False	AATAAA	-13	NA	97141396	97103806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97104239_97110020_97110427_97111212_97111426_97134546_97134736_97139504_97139759_97141297
transcript_108469.nnic	chr4	-	1361	6	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_4	17.9376698598229	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-97136797	True	NA	NA	False	NA	NA	NA	97141406	97107373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97107819_97108320_97108476_97110176_97110427_97111212_97111426_97134546_97134736_97141297
transcript_108479.nnic	chr4	-	1339	5	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	11.6484977572217	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGAGTTTTCTTGGGT	-97136787	True	NA	NA	False	AATAAA	-13	NA	97141396	97103806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97104239_97110020_97110427_97111212_97111426_97134546_97134736_97141297
transcript_108485.nnic	chr4	-	1138	5	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	17.0788612032536	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-97136787	True	NA	NA	False	NA	NA	NA	97141396	97107373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97107819_97108320_97108476_97110176_97110427_97134546_97134736_97141297
transcript_108502.nnic	chr4	-	1126	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	13.589211407093	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGAGTTTTCTTGGGT	-97136787	True	NA	NA	False	AATAAA	-13	NA	97141396	97103806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97104239_97110020_97110427_97134546_97134736_97141297
transcript_108507.nnic	chr4	-	1094	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	29.6348143611905	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAAGTTGAAATATCAT	-97136787	True	NA	NA	False	AATAAA	-22	NA	97141396	97109874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97110427_97134546_97134736_97139504_97139759_97141297
transcript_10851.known	chr1	+	1284	6	FSM	ENSG00000143575.15	ENST00000531435.5	1284	6	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	28.7012194862866	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTCTTGGTTTTGTC	154266810	True	NA	29	True	AATAAA	-18	NA	154272628	154275875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273335_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_108513.nnic	chr4	-	1943	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_3	40.5490101262931	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTCAGTGATTAAT	-97136844	True	NA	-17	True	AATAAA	-42	NA	97141453	97133324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97134736_97139504_97139759_97139856_97139979_97141297
transcript_108515.nnic	chr4	-	1861	4	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_2	43.8406204335659	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTCAGTGATTAAT	-97136787	True	NA	-17	True	AATAAA	-42	NA	97141396	97133324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97134736_97139504_97139759_97140501_97140599_97141297
transcript_108521.nnic	chr4	-	840	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	26	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAAAGTTGAAATATCAT	-97136787	True	NA	NA	False	AATAAA	-22	NA	97141396	97109874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97110427_97134546_97134736_97141297
transcript_108525.nnic	chr4	-	1853	3	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_2	14	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTCTCAGTGATTAAT	-97136876	True	NA	-17	True	AATAAA	-42	NA	97141485	97133324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97134736_97139504_97139759_97141297
transcript_108527.nnic	chr4	-	1550	2	Antisense	novelGene_ENSG00000253170.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCCAATAAAATATTTTG	-97136851	True	NA	-41	True	AATAAA	-18	NA	97141460	97133348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_97134736_97141297
transcript_10853.known	chr1	+	771	6	FSM	ENSG00000143575.15	ENST00000532105.1	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	267.263615181715	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCAAACTGACCAATAAAA	154266849	True	NA	-7	True	NA	NA	NA	154272667	154275839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154272777_154273773_154273962_154274949_154275002_154275153_154275261_154275392_154275484_154275615
transcript_108537.known	chr4	+	2092	15	FSM	ENSG00000138698.15	ENST00000339360.9	2092	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	28.6385817970607	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	98259177	False	NA	NA	False	NA	NA	NA	98261517	98442334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_108539.known	chr4	+	1942	14	FSM	ENSG00000138698.15	ENST00000408900.7	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	36.9732031541668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTGTATTCCTGTTGC	98259177	False	NA	NA	False	NA	NA	NA	98261517	98442334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98391951_98392081_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_108541.known	chr4	+	1686	13	FSM	ENSG00000138698.15	ENST00000264572.11	1686	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	44.4462846841243	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTGCCCGATACACGGCA	98259090	True	NA	NA	False	NA	NA	NA	98261430	98442117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98404476_98404603_98416744_98416889_98417366_98417499_98418656_98418792_98420018_98420145_98421254_98421395_98433935_98434063_98436939_98437069_98441989
transcript_108544.nnic	chr4	+	1166	8	NNC	ENSG00000138698.15	novel	3747	15	NA	NA	0	4497	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	53.642809587196	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGTGATTATGCATAT	98259043	True	NA	NA	False	AATAAA	-42	NA	98261383	98409083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98404476_98404603_98408862
transcript_108548.nic	chr4	+	1788	7	NIC	ENSG00000138698.15	novel	3747	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	57.6502866910092	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTATTTTTGCTGACT	98259043	True	NA	NA	False	AATAAA	-17	NA	98261383	98396909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951_98392081_98395940
transcript_108552.known	chr4	+	875	6	FSM	ENSG00000138698.15	ENST00000507303.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	45.5438250479689	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCATTGTTTATGAGAG	98259162	False	NA	4	True	AGTAAA	-17	NA	98261502	98392252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98379016_98379164_98391951
transcript_108557.known	chr4	+	583	6	FSM	ENSG00000138698.15	ENST00000512857.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	77.4121437501895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCTTAGTGAAATTACT	98259116	True	NA	NA	False	NA	NA	NA	98261456	98391989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293404_98293516_98343138_98343262_98352475_98352602_98387435_98387508_98391951
transcript_108562.known	chr4	+	941	5	FSM	ENSG00000138698.15	ENST00000511379.5	941	5	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	22.951034835057	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGGAGTAGCTTTAAAAT	98259119	True	NA	NA	False	AATAAA	-36	NA	98261459	98379490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343262_98352475_98352602_98379016
transcript_108571.known	chr4	+	537	5	FSM	ENSG00000138698.15	ENST00000510870.5	537	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	76.9805170156709	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACCTTAGTGAAATTACT	98259145	True	NA	NA	False	NA	NA	NA	98261485	98391989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98261570_98293407_98293516_98343138_98343320_98352475_98352602_98391951
transcript_108573.known	chr4	-	397	2	FSM	ENSG00000214559.3	ENST00000356499.2	397	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGCATTCTTGAAGTAA	NA	False	NA	NA	False	AATAAA	-15	NA	98261630	98251687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98252006_98261551
transcript_108574.known	chr4	-	1191	8	FSM	ENSG00000168785.8	ENST00000505184.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.1877859507255	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACATTCTTGTCCTCA	-98657676	False	1185	NA	False	AAAAAG	-45	NA	98657692	98472209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98472588_98476188_98476306_98476412_98476461_98478684_98478811_98482004_98482176_98486737_98486885_98507677_98507729_98657539
transcript_108582.known	chr4	-	1097	7	FSM	ENSG00000151247.13	ENST00000280892.10	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	886.90773665209	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTCTGTAATAGTTCAG	-98908414	True	NA	NA	False	CATAAA	-12	NA	98929092	98880764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98928894
transcript_108588.known	chr4	-	574	2	FSM	ENSG00000151247.13	ENST00000418385.2	574	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGTCTCAAACTCCTGGA	-98908447	True	NA	NA	False	TTTAAA	-38	NA	98929125	98925971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98926515_98929094
transcript_108589.known	chr4	-	2427	7	FSM	ENSG00000151247.13	ENST00000450253.7	2427	7	0	0	0	0	multi-exon	FALSE	canonical	3	1488	junction_6	362.245619557903	2715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTCATTGTAAAATTT	-98908455	True	NA	-3	True	AATAAA	-17	NA	98929133	98879275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98929094
transcript_10859.known	chr1	-	3239	13	FSM	ENSG00000160714.10	ENST00000292211.5	3239	13	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_12	20.7020865829725	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTGGCTCTAATAAAATTA	-154556157	True	NA	-5	True	AATAAA	-13	NA	154558662	154548576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558226
transcript_108590.known	chr4	-	1132	8	FSM	ENSG00000151247.13	ENST00000504432.5	1132	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	1071.44241895813	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGGCTAGAGTTT	-98908447	True	NA	NA	False	NA	NA	NA	98929125	98880844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_98881143_98884921_98885062_98887078_98887193_98887888_98887953_98891236_98891333_98901875_98901983_98909677_98909960_98929094
transcript_108591.known	chr4	+	2686	11	FSM	ENSG00000164024.12	ENST00000296411.11	2686	11	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_9	48.3297010129382	843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTCATTAACTTTG	98982468	True	NA	24	True	ATTAAA	-21	NA	98995720	99062809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_98995868_99028866_99028919_99034229_99034343_99035399_99035461_99039373_99039466_99041042_99041127_99043248_99043388_99045178_99045311_99048732_99048877_99057752_99057819_99061153
transcript_1086.nic	chr1	-	669	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-209	16422	-176	-137	5prime_fragment	FALSE	canonical	3	63	junction_3	15.8954920234218	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGTTCAAGTGTGGTT	-1724517	False	NA	75	True	NA	NA	NA	1724533	1719302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_108604.known	chr4	-	2652	9	FSM	ENSG00000197894.12	ENST00000296412.14	2652	9	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_8	178.157760145327	11983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCTGGTGGTGGTAAGT	-99070257	True	NA	45	True	AATAAA	-22	NA	99088788	99070977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99072442_99072572_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_108605.known	chr4	-	1475	7	FSM	ENSG00000197894.12	ENST00000512621.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	3	2206	junction_5	81.1783016985861	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTTAACATAATAAAAGTAA	-99066685	False	NA	-59	True	CATAAA	-25	NA	99085216	99072185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99072712_99074913_99075050_99076291_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114
transcript_108606.known	chr4	-	1909	6	FSM	ENSG00000197894.12	ENST00000508511.5	1909	6	0	0	0	0	multi-exon	FALSE	canonical	3	1816	junction_5	224.622883963322	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAATTAAAATAT	-99070186	True	NA	NA	False	NA	NA	NA	99088717	99075224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99076553_99076703_99076924_99081364_99081453_99081974_99082117_99085114_99085217_99088688
transcript_10861.nnic	chr1	-	1473	13	NNC	ENSG00000160714.10	novel	3239	13	NA	NA	138	426	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	68.985656721766	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGGTCTTGACTCATC	-154558762	False	NA	-13	True	AAAACA	-22	NA	154558890	154549982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_154550470_154550937_154551005_154551396_154551493_154551770_154551820_154551920_154551980_154552092_154552184_154552403_154552465_154552735_154552821_154553031_154553173_154554734_154554786_154555427_154555533_154555859_154555965_154558814
transcript_108610.nnic	chr4	+	950	3	NNC	ENSG00000246090.8	novel	1088	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAATTGATTTCTGTGA	99088373	True	NA	NA	False	AATAAA	-21	NA	99088823	99103112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_99089285_99102380_99102525_99102767
transcript_108612.nnic	chr4	+	1193	2	FSM	ENSG00000246090.8	ENST00000685116.1	1178	2	-15	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAATTGATTTCTGTGA	99088373	True	NA	NA	False	AATAAA	-21	NA	99088823	99103112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_99089285_99102380
transcript_108613.nnic	chr4	+	801	2	NIC	ENSG00000246090.8	novel	1178	2	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAATTGATTTCTGTGA	99088378	True	NA	NA	False	AATAAA	-21	NA	99088828	99103112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_99089285_99102767
transcript_108614.known	chr4	-	3516	8	FSM	ENSG00000145331.14	ENST00000394877.7	3516	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	12.7471485406881	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCTGCTGAAATACAGA	-99563744	True	NA	NA	False	AATAAA	-42	NA	99564017	99546708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563912
transcript_108616.known	chr4	-	3547	8	FSM	ENSG00000145331.14	ENST00000394876.7	3547	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	10.7684345971673	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGTCTGCTGAAATACA	-99563766	True	NA	NA	False	AATAAA	-40	NA	99564039	99546710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559362_99563912
transcript_108620.nic	chr4	-	1360	8	NIC	ENSG00000145331.14	novel	3694	8	NA	NA	0	-2199	combination_of_known_junctions	FALSE	canonical	3	7	junction_7	13.4148866440783	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTAAGGAAATATTTTT	-99563450	False	273	NA	False	AATAAA	-18	NA	99563723	99548925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563557
transcript_108624.known	chr4	-	3694	8	FSM	ENSG00000145331.14	ENST00000273962.7	3694	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	15.7739128478197	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGCATCAAAAAATATA	-99563395	False	273	NA	False	AATAAA	-24	NA	99563668	99546726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99549357_99550884_99550991_99553784_99553935_99556145_99556221_99557344_99557417_99558048_99558212_99559153_99559351_99563367
transcript_108627.known	chr4	-	961	6	FSM	ENSG00000109270.13	ENST00000515100.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	149.554806007697	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAACTTTCCTTTGTACAT	-99890524	True	NA	NA	False	AATAAA	-13	NA	99894428	99881492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99894334
transcript_108629.known	chr4	-	4163	7	FSM	ENSG00000109270.13	ENST00000499666.7	4163	7	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_6	24.7616414821168	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTTGGACATATGTGTAT	-99890523	True	NA	NA	False	AAGAAA	-31	NA	99894427	99878335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885676_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_10863.known	chr1	-	1625	2	FSM	ENSG00000286391.2	ENST00000664303.2	1651	2	26	0	26	0	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	-154567592	True	NA	NA	False	NA	NA	NA	154567720	154564854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154566183_154567423
transcript_108630.known	chr4	-	1220	7	FSM	ENSG00000109270.13	ENST00000226522.8	1220	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	148.612938721888	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTGAGCACTGTATAGG	-99890472	True	NA	-44	True	AATAAA	-19	NA	99894376	99881206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99882068_99884061_99884126_99885541_99885655_99887295_99887355_99891999_99892035_99893954_99894001_99894334
transcript_108631.known	chr4	-	5967	8	FSM	ENSG00000164031.17	ENST00000442697.7	5967	8	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_5	14.7689691237944	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTTTTATCATGTTT	-99946607	False	133369	NA	False	AATAAA	-23	NA	99946618	99896247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99901153_99903725_99903899_99905596_99905707_99906516_99906612_99908710_99908897_99923039_99923186_99930449_99930622_99946438
transcript_10864.known	chr1	-	1514	2	FSM	ENSG00000286391.2	ENST00000666466.2	1528	2	14	0	11	0	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCACTGAACTCCAGCC	-154567607	True	NA	NA	False	NA	NA	NA	154567735	154564854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154566183_154567549
transcript_108643.nic	chr4	-	657	4	ISM	ENSG00000164031.17	ENST00000426476.5	662	5	-140	14288	-80	23	5prime_fragment	FALSE	canonical	1	2	junction_1	66.7349650150171	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTAAGCTGTCTTTAG	-99946687	False	133369	NA	False	AGTAAA	-19	NA	99946698	99923016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_99923186_99924759_99924816_99930449_99930622_99946438
transcript_108644.known	chr4	-	561	4	FSM	ENSG00000164031.17	ENST00000471738.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	66.001683480213	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGCTGTTGTTTTGCGTG	-99946563	False	133369	2	True	AATAAA	-27	NA	99946574	99923680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99923878_99924759_99924816_99930449_99930622_99946438
transcript_108645.nic	chr4	-	1004	4	NIC	ENSG00000164031.17	novel	3442	10	NA	NA	-80	-2552	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	66.4730521840743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATTTGGAGTATATTT	-99946687	False	133369	NA	False	AATAAA	-22	NA	99946698	99927342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_99927839_99928541_99928618_99930449_99930622_99946438
transcript_108647.known	chr4	-	960	3	FSM	ENSG00000164031.17	ENST00000474664.5	960	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTTTATTTTCC	-99946549	False	NA	NA	False	TTTAAA	-26	NA	99946560	99922519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99923186_99930449_99930622_99946438
transcript_108649.known	chr4	+	1647	2	FSM	ENSG00000245322.7	ENST00000666876.1	1647	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGCTGGAGAGGGATGAAA	99950516	False	NA	NA	False	AGTAAA	-25	NA	99950544	99952424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_99950681_99950913
transcript_10866.known	chr1	-	471	3	FSM	ENSG00000160710.18	ENST00000494866.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	235.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGAACACCCCCTTTGTG	-154619663	True	NA	NA	False	NA	NA	NA	154627912	154602077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154602249_154602384_154602627_154627854
transcript_10867.nic	chr1	-	2585	2	ISM	ENSG00000160710.18	ENST00000368471.8	6519	15	-3	18092	-3	18	5prime_fragment	FALSE	canonical	3	471	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACATGATTGATCTCCA	-154619722	True	NA	NA	False	AAAAAG	-12	NA	154627971	154600158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_154602627_154627854
transcript_108672.known	chr4	-	726	5	FSM	ENSG00000164032.12	ENST00000529158.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	5375.17381114323	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTTATAGTAACAAACA	-99816930	True	NA	-119	True	TTTAAA	-28	NA	99950299	99948171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99948524_99948810_99948941_99949272_99949387_99949662_99949741_99950247
transcript_108686.known	chr4	-	868	5	FSM	ENSG00000164032.12	ENST00000651623.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5354.71331515516	18038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTTGTGTATTAAATTTG	-99816911	True	NA	-35	True	AATAAA	-15	NA	99950280	99948087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99948524_99948813_99948941_99949272_99949387_99949662_99949741_99950167
transcript_108687.known	chr4	-	1843	2	FSM	ENSG00000164032.12	ENST00000511348.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	11763	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGTGTATTAAATTTGCT	-99950344	False	NA	-33	True	AATAAA	-17	NA	99950355	99948085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99949741_99950167
transcript_108688.known	chr4	-	435	4	FSM	ENSG00000164032.12	ENST00000527366.1	435	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5700.19175116066	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGGAAGGAATTTTTTG	-99816885	True	NA	NA	False	TTTAAA	-9	NA	99950254	99948777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_99948941_99949272_99949380_99949662_99949741_99950167
transcript_108689.known	chr4	-	2604	3	FSM	ENSG00000145358.6	ENST00000273990.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	0.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGTCCTCTTTTTTT	-100189900	True	NA	-1	True	AATAAA	-18	NA	100190468	100185869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_100188168_100189892_100190033_100190302
transcript_108693.known	chr4	-	3604	13	FSM	ENSG00000138814.17	ENST00000394853.8	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	7.75806032459145	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATTCTCATCCTTCCAC	-101347289	False	NA	-10	True	AATAAA	-16	NA	101347327	101024327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_101026062_101032266_101032365_101040481_101040567_101061086_101061162_101063231_101063358_101080531_101080627_101083185_101083264_101093775_101093916_101098366_101098513_101099610_101099723_101108953_101109079_101195915_101196117_101346738
transcript_108694.known	chr4	+	790	2	FSM	ENSG00000254531.2	ENST00000527564.2	822	2	28	4	4	0	multi-exon	FALSE	canonical	3	11	junction_1	0	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCTGTTTTATTTCCA	101347430	True	NA	25	True	AATAAA	-15	NA	101347779	101348883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_101348010_101348323
transcript_108695.known	chr4	+	442	2	FSM	ENSG00000254531.2	ENST00000529296.2	648	2	40	166	16	-162	multi-exon	FALSE	canonical	2	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTGCGCCACAGAGTC	101347442	True	NA	NA	False	NA	NA	NA	101347791	101348721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_101347836_101348323
transcript_108698.known	chr4	-	3238	8	FSM	ENSG00000138821.14	ENST00000394833.6	3238	8	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.150157901031	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTGTCATTTGTTAT	-102345117	False	NA	-2	True	ATTAAA	-42	NA	102345139	102261665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102263194_102267489_102267675_102267871_102268080_102304316_102304482_102304988_102305112_102307435_102307606_102315667_102315831_102344443
transcript_108704.known	chr4	-	610	4	FSM	ENSG00000248161.5	ENST00000506972.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACCAAGGACTCTG	NA	False	NA	NA	False	NA	NA	NA	102431290	102418807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102418989_102419696_102419795_102430396_102430499_102431061
transcript_108706.known	chr4	-	673	3	FSM	ENSG00000248161.5	ENST00000502883.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	-102431135	True	NA	2	True	ATTAAA	-21	NA	102431249	102418601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102418989_102419696_102419795_102431061
transcript_108707.nnic	chr4	-	690	3	NIC	ENSG00000248161.5	novel	610	4	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	-102431148	True	NA	2	True	ATTAAA	-21	NA	102431262	102418601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_102418989_102430396_102430499_102431061
transcript_108709.known	chr4	-	608	2	FSM	ENSG00000248161.5	ENST00000505709.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTTATGTCTTTTTA	NA	False	NA	2	True	ATTAAA	-21	NA	102431282	102418601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102418989_102431061
transcript_108713.known	chr4	-	4001	17	FSM	ENSG00000109323.11	ENST00000647097.2	4001	17	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_11	19.6284829711825	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTAGCTCAAGGGCTGGG	-102758342	True	NA	NA	False	AATAAA	-7	NA	102760968	102630769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102632282_102634787_102635046_102635864_102636008_102639712_102639858_102650536_102650702_102657681_102657901_102664684_102664853_102668962_102669050_102671280_102671399_102673918_102674071_102689573_102689685_102690595_102690772_102714437_102714562_102722870_102723042_102723861_102723968_102726588_102726684_102760717
transcript_108717.known	chr4	-	582	2	FSM	ENSG00000109323.11	ENST00000507358.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGCTGTGTATGTTG	-102758368	True	NA	NA	False	AATGAA	-20	NA	102760994	102753690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102753996_102760717
transcript_108726.known	chr4	-	574	8	FSM	ENSG00000109332.20	ENST00000502404.5	574	8	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_7	1400.5882291934	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAACCTGCATTATAGCT	-102825762	False	4107	-61	True	NA	NA	NA	102825780	102797398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825721
transcript_108727.known	chr4	-	577	8	FSM	ENSG00000109332.20	ENST00000507845.5	577	8	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_7	1401.18046442189	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCTGGAATAAACTTTAA	-102825767	False	4107	-47	True	NA	NA	NA	102825785	102797384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825238_102825318_102825737
transcript_108730.known	chr4	-	2368	8	FSM	ENSG00000109332.20	ENST00000394801.8	2368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102827930	False	NA	-16	True	AATAAA	-17	NA	102827948	102795975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827591
transcript_108731.known	chr4	-	838	8	FSM	ENSG00000109332.20	ENST00000349311.12	838	8	0	0	0	0	multi-exon	FALSE	canonical	1	80	junction_7	1178.36457059116	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATCTGAGAAGACTTAAG	-102827831	False	98	74	True	NA	NA	NA	102827849	102797263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827734
transcript_108732.known	chr4	-	2227	8	FSM	ENSG00000109332.20	ENST00000394803.9	2227	8	0	0	0	0	multi-exon	FALSE	canonical	1	491	junction_7	1067.21143401763	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTGTTTGACAAGT	-102828141	False	NA	-16	True	AATAAA	-17	NA	102828159	102795975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827943
transcript_108734.known	chr4	-	896	8	FSM	ENSG00000109332.20	ENST00000338145.7	896	8	0	0	0	0	multi-exon	TRUE	canonical	1	53	junction_7	1185.91247913295	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTAAGTTCTTCCAGCTT	-102868180	True	NA	-83	True	NA	NA	NA	102868875	102797251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102868714
transcript_108735.known	chr4	-	1087	8	FSM	ENSG00000109332.20	ENST00000321805.11	1087	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_7	1199.11567755712	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGACAATAACTGCTTT	-102806631	True	NA	-66	True	NA	NA	NA	102827553	102797234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827426
transcript_108737.known	chr4	-	4166	8	FSM	ENSG00000109332.20	ENST00000394804.6	4166	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1200.80695656661	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTTGGTCTTACTCGGT	-102827930	False	NA	-4	True	ATTAAA	-15	NA	102827948	102794385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826845_102827591
transcript_108768.known	chr4	-	527	7	FSM	ENSG00000109332.20	ENST00000505207.5	527	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	1264.18533275606	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTACTGTTCCTTTTTTG	-102825762	False	4107	-29	True	AATAAA	-5	NA	102825780	102797366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825721
transcript_108769.known	chr4	-	711	7	FSM	ENSG00000109332.20	ENST00000350435.11	711	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1265.67471027204	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCCAGCTTTGGAC	-102825842	False	NA	-78	True	NA	NA	NA	102825860	102797246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825737
transcript_108770.known	chr4	-	660	7	FSM	ENSG00000109332.20	ENST00000357194.10	660	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	1262.99454560272	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTTTGATTTTCTTAT	-102868201	True	NA	-19	True	AATAAA	-15	NA	102868896	102797356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102868714
transcript_108771.known	chr4	-	578	7	FSM	ENSG00000109332.20	ENST00000504211.5	578	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1265.37675548958	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCTCATCTTTTTTAA	-102825524	False	887	16	True	TTTAAA	-43	NA	102825542	102797321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102825477
transcript_10878.known	chr1	-	1002	5	FSM	ENSG00000163344.6	ENST00000368467.4	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	23.2701525564402	4841	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCAGAGCTGCTTGTCTC	-154933853	True	NA	-7	True	AATAAA	-15	NA	154936719	154924739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154925266_154926353_154926484_154929023_154929177_154932351_154932416_154936590
transcript_108790.known	chr4	+	883	2	FSM	ENSG00000246560.3	ENST00000501133.3	1351	2	444	24	-233	-24	multi-exon	FALSE	canonical	2	10	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAAGTTTGCAGTCCACT	102828033	False	NA	-21	True	NA	NA	NA	102828054	102844075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102828186_102843323
transcript_108792.known	chr4	-	3729	8	FSM	ENSG00000109332.20	ENST00000453744.7	3729	8	0	0	0	0	multi-exon	FALSE	canonical	1	1098	junction_3	787.039816952985	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCTTACTCGGTAAT	-102806629	True	NA	-1	True	ATTAAA	-18	NA	102827551	102794382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102797461_102799406_102799501_102801453_102801560_102802560_102802639_102809671_102809704_102809791_102809856_102826484_102826637_102827426
transcript_108793.known	chr4	-	1735	12	FSM	ENSG00000164037.17	ENST00000394789.7	1735	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.01235851101624	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACCTTACTTTATTTATA	-103019639	True	NA	NA	False	AATAAA	-29	NA	103019719	102885047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102885329_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102932123_102932300_102945192_102945321_102946646_102946790_102949256_102949428_102989799_102989942_102991642_102991713_103019598
transcript_108794.known	chr4	-	1845	12	FSM	ENSG00000164037.17	ENST00000296422.12	1845	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.12424026282689	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTCTTGGTATTTACAT	-103019625	True	NA	NA	False	AATAAA	-18	NA	103019705	102900927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102932123_102932300_102945192_102945321_102946646_102946790_102949256_102949428_102989799_102989942_102991642_102991713_103019598
transcript_108801.nic	chr4	-	1143	8	NIC	ENSG00000164037.17	novel	1184	9	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.0303814862217	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATGAATTATTTCAC	NA	False	NA	9	True	ATTAAA	-29	NA	103019747	102901087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102932123_102932300_102991642_102991713_103019598
transcript_108804.known	chr4	-	1184	9	FSM	ENSG00000164037.17	ENST00000504216.5	1184	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.02715934252836	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAATGAATTATTTCAC	-103019586	True	NA	9	True	ATTAAA	-29	NA	103019666	102901087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_102901333_102905513_102905651_102906535_102906645_102910438_102910589_102911430_102911538_102912007_102912130_102932123_102932300_102991642_102991713_103019598
transcript_108808.known	chr4	+	471	4	FSM	ENSG00000145354.12	ENST00000574446.1	471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	467.761572693706	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACATAATAAACACAATGAA	102860353	True	NA	NA	False	NA	NA	NA	102869053	102887359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869188_102882770_102882874_102885215_102885431_102887340
transcript_108811.known	chr4	+	852	4	FSM	ENSG00000145354.12	ENST00000646632.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	466.739994239	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGCTATGGATCCAAAG	102860273	True	NA	NA	False	AATAAA	-34	NA	102868973	102887681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869188_102882791_102882874_102885215_102885431_102887340
transcript_108815.known	chr4	+	1738	4	FSM	ENSG00000145354.12	ENST00000643561.1	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	478.725391012426	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATTTTTGTGCTTTTTA	102869275	True	NA	17	True	AATAAA	-17	NA	102869321	102888567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_102869456_102874509_102874672_102885215_102885431_102887340
transcript_108832.nic	chr4	-	1230	11	NIC	ENSG00000164039.15	novel	2920	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_9	121.72612702292	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-103096464	True	NA	-8	True	AATAAA	-15	NA	103099870	103079476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_108840.known	chr4	-	824	4	FSM	ENSG00000164038.16	ENST00000505838.1	824	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	9.17726659862414	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACCTCACATAGCTGTC	-103076324	False	NA	NA	False	NA	NA	NA	103076336	103065410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103065769_103066326_103066508_103067460_103067593_103076183
transcript_108841.known	chr4	-	2920	10	FSM	ENSG00000164039.15	ENST00000296424.9	2920	10	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_9	24.504471751141	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGATCTGAGTTAGTCT	-103096428	True	NA	NA	False	AATAAA	-38	NA	103099834	103077591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103085463_103086479_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_108842.known	chr4	-	2046	9	FSM	ENSG00000164039.15	ENST00000492366.5	2046	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	24.8215506163495	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAGGAGAATAGTTTTTAA	-103096422	True	NA	-8	True	AATAAA	-15	NA	103099828	103079476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103079756_103082080_103082174_103082870_103082930_103085348_103086541_103091176_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103099782
transcript_108843.known	chr4	-	616	6	FSM	ENSG00000164039.15	ENST00000509245.1	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	142.494070052055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCCTAAAGTAAGACCACCA	-103096464	True	NA	NA	False	NA	NA	NA	103099870	103091184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103091286_103092599_103092697_103095202_103095282_103096182_103096275_103098643_103098803_103099782
transcript_108849.nnic	chr4	+	694	5	NNC	ENSG00000248740.7	novel	774	4	NA	NA	-3	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.73861278752583	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCTCTCTAATATGTGAG	103255548	True	NA	NA	False	AATAAA	-40	NA	103255818	103371859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_103255947_103256177_103256295_103343091_103343236_103371469_103371507_103371591
transcript_10885.known	chr1	-	3207	11	FSM	ENSG00000163346.17	ENST00000368463.8	3207	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	9.17877987534291	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCTCCTGTTTTGGGCA	-154956089	False	5085	-27	True	AATAAA	-17	NA	154956099	154944079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951922_154953670_154953758_154956068
transcript_108855.known	chr4	+	774	4	FSM	ENSG00000248740.7	ENST00000668077.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATCTCTCTAATATGTG	103255551	True	NA	NA	False	AATAAA	-38	NA	103255821	103371857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103255947_103256177_103256295_103343091_103343236_103371469
transcript_108868.known	chr4	+	1058	4	FSM	ENSG00000248740.7	ENST00000664815.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGAAGGTTTGTTAT	103425020	True	NA	NA	False	ATTAAA	-17	NA	103425041	103454276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103425186_103436934_103437047_103437717_103437843_103453599
transcript_108871.known	chr4	+	1257	3	FSM	ENSG00000248740.7	ENST00000656681.1	1257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATGTGAAGGTTTGTTA	103255555	True	NA	NA	False	ATTAAA	-16	NA	103255825	103454275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103256295_103436934_103437047_103453599
transcript_108876.known	chr4	+	931	3	FSM	ENSG00000248740.7	ENST00000657481.2	940	3	9	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACATGTGAAGGTTTGTT	103425020	True	NA	NA	False	ATTAAA	-15	NA	103425041	103454274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103425186_103436934_103437047_103453599
transcript_108879.nnic	chr4	+	651	2	NIC	ENSG00000248740.7	novel	881	4	NA	NA	-22	0	intron_retention	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	103255529	True	NA	7	True	AATAAA	-16	NA	103255799	103453755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_103256295_103453599
transcript_10888.known	chr1	-	3144	10	FSM	ENSG00000163346.17	ENST00000368465.5	3144	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	25.3615826900296	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGTTTTGGGCACTCA	-154956111	False	5085	-23	True	AATAAA	-21	NA	154956121	154944075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154945118_154945571_154946804_154947416_154947549_154947641_154947713_154947981_154948006_154948132_154948367_154951231_154951398_154951470_154951536_154951794_154951920_154956068
transcript_108880.known	chr4	+	881	4	FSM	ENSG00000248740.7	ENST00000656104.1	881	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.08248290463863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTATTGTACTTAGT	103255555	True	NA	7	True	AATAAA	-16	NA	103255825	103453755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_103256295_103343091_103343236_103436934_103437047_103453599
transcript_108881.known	chr4	-	5359	5	FSM	ENSG00000169836.5	ENST00000304883.3	5359	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTTACTACTTTCCTA	-103719835	True	NA	NA	False	ATTAAA	-20	NA	103719985	103586030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_103589995_103591486_103591684_103656193_103656345_103658214_103658404_103719127
transcript_108883.known	chr4	-	3130	3	FSM	ENSG00000168772.11	ENST00000466963.1	3130	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCACTGTGTGTTTTATA	-104494778	True	NA	NA	False	AATGAA	-18	NA	104494901	104469513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_104472367_104494505_104494582_104494700
transcript_108884.known	chr4	-	5569	3	FSM	ENSG00000168772.11	ENST00000394767.3	5569	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTCTATTTTTCCATGAT	-104494771	True	NA	-3	True	AATAAA	-19	NA	104494894	104468307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_104472367_104490743_104492060_104494700
transcript_108888.nic	chr4	-	1120	11	NIC	ENSG00000138777.20	novel	1665	12	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_10	160.182520894135	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468507	True	NA	-6	True	AATAAA	-17	NA	105474070	105369564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105473893
transcript_108897.known	chr4	-	667	6	FSM	ENSG00000138777.20	ENST00000354147.7	667	6	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_5	215.577920947392	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468487	True	NA	-6	True	AATAAA	-17	NA	105474050	105369564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105473893
transcript_108903.known	chr4	-	584	2	FSM	ENSG00000138777.20	ENST00000505713.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGAAGCTTGACTTGGT	-105468496	True	NA	NA	False	NA	NA	NA	105474059	105473357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105473776_105473893
transcript_108905.known	chr4	-	1665	12	FSM	ENSG00000138777.20	ENST00000341695.10	1665	12	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_6	44.8396592462779	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACTGTTACTTTCATTT	-105468499	True	NA	-11	True	AATAAA	-18	NA	105474062	105369076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_108906.known	chr4	-	859	8	FSM	ENSG00000138777.20	ENST00000432483.6	859	8	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_6	198.378734870902	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468487	True	NA	-6	True	AATAAA	-17	NA	105474050	105369564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105456680_105456746_105473893
transcript_108907.known	chr4	-	1177	13	FSM	ENSG00000138777.20	ENST00000509031.5	1177	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	209.071758016237	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTGGACATTTATTG	-105468451	True	NA	-2	True	AATAAA	-21	NA	105474014	105369560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456247_105456292_105456680_105456746_105473893
transcript_108908.known	chr4	-	1072	10	FSM	ENSG00000138777.20	ENST00000351450.10	1072	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	174.638674601781	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTCTCCTTTGGACATTT	-105468504	True	NA	-6	True	AATAAA	-17	NA	105474067	105369564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105369754_105370836_105370874_105386566_105386637_105396248_105396335_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105473893
transcript_108909.known	chr4	-	1356	9	FSM	ENSG00000138777.20	ENST00000509426.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	182.484930884717	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTTGAGGGCTTTGTCT	-105468496	True	NA	NA	False	ATTAAA	-11	NA	105474059	105398303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105398868_105399036_105399165_105424195_105424323_105437949_105438037_105446382_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_108910.known	chr4	-	631	5	FSM	ENSG00000138777.20	ENST00000499847.6	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_3	31.8070353852729	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTCTATACTCAAGTT	-105468496	True	NA	0	True	AATAAA	-18	NA	105474059	105446201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105446503_105449349_105449404_105453597_105453643_105456680_105456746_105473893
transcript_108916.known	chr4	-	1718	8	FSM	ENSG00000138785.16	ENST00000340139.10	1718	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	55.9022470432969	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	-105706684	True	NA	-4	True	AATAAA	-17	NA	105708689	105682626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105703647_105703810_105708637
transcript_10892.nnic	chr1	-	2571	13	NNC	ENSG00000160691.19	novel	3059	13	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	325.084305304879	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960471	True	NA	-14	True	ATTAAA	-17	NA	154970764	154962297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_108920.known	chr4	-	1975	7	FSM	ENSG00000138785.16	ENST00000451321.6	1975	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	35.9768444048854	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTTTCTTACCTT	NA	False	NA	-4	True	AATAAA	-17	NA	105709108	105682626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_105683318_105686691_105686839_105691975_105692136_105693298_105693487_105695515_105695669_105699849_105700015_105708637
transcript_108924.known	chr4	+	2228	6	FSM	ENSG00000138780.15	ENST00000484843.1	2228	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.4995237987254	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAACCCAAA	105705579	True	NA	NA	False	TTTAAA	-3	NA	105708786	105823690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_105709017_105717592_105718040_105719059_105719528_105726578_105726831_105729405_105729500_105822953
transcript_108925.nic	chr4	+	1574	3	ISM	ENSG00000138780.15	ENST00000484843.1	2228	6	-6	103740	3	391	5prime_fragment	FALSE	canonical	3	106	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACTAAAAATCTTGTCA	105705573	True	NA	NA	False	NA	NA	NA	105708780	105719950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_105709017_105717592_105718040_105719059
transcript_108927.nic	chr4	-	3530	26	NIC	ENSG00000145348.17	novel	7961	26	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_25	18.1797249704169	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACCCAAACAAGGGGGA	-106313323	True	NA	NA	False	AATAAA	-20	NA	106316266	106046090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106315926
transcript_108928.known	chr4	-	7818	26	FSM	ENSG00000145348.17	ENST00000273980.10	7818	26	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_25	21.8941453361395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTTCTAATTGGTAC	-106316671	True	NA	NA	False	AATAAA	-14	NA	106316683	106041598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_106046681_106095481_106095642_106116202_106116379_106171094_106171271_106193608_106193771_106194717_106194755_106212749_106212836_106230362_106230447_106231728_106231780_106232937_106233065_106233587_106233651_106235268_106235368_106236389_106236520_106236758_106236809_106242469_106242570_106244625_106244765_106247138_106247288_106248244_106248307_106248920_106248983_106250417_106250479_106251865_106252008_106260436_106260511_106262097_106262213_106295093_106295167_106308767_106308990_106316547
transcript_10893.nnic	chr1	-	2574	13	NNC	ENSG00000160691.19	novel	3062	13	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	3	98	junction_1	296.762203717986	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960471	True	NA	-14	True	ATTAAA	-17	NA	154970764	154962297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_154962595_154963518_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_108940.nic	chr4	-	1243	3	ISM	ENSG00000145348.17	ENST00000509532.5	848	6	0	42502	0	670	5prime_fragment	FALSE	canonical	3	31	junction_2	22	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATTTTCCTGTATTTTT	-106313323	True	NA	NA	False	NA	NA	NA	106316266	106294485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_106295167_106308767_106308990_106315926
transcript_108941.known	chr4	+	1665	9	FSM	ENSG00000164022.18	ENST00000672911.1	1665	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	313.993630508646	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATCCTCTCCTTTTCAA	106308609	True	NA	NA	False	NA	NA	NA	106316577	106348077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316595_106320865_106320890_106321176_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_108945.known	chr4	+	1607	8	FSM	ENSG00000164022.18	ENST00000672337.1	1607	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	290.788933905045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAGACATTAGAGAAA	106308581	True	NA	-37	True	AATAAA	-12	NA	106316549	106347704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316595_106320865_106321452_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_108950.known	chr4	+	2412	7	FSM	ENSG00000164022.18	ENST00000358008.7	2412	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	248.450531628867	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGACTGATATTTTGC	106315645	False	NA	84	True	AATAAA	-17	NA	106315695	106348491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316345_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_108953.known	chr4	+	2773	7	FSM	ENSG00000164022.18	ENST00000672341.1	2773	7	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	64.0947649101617	1221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAGCATCATCAGTAG	106308581	True	NA	42	True	AATAAA	-28	NA	106316549	106349456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316595_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_108955.known	chr4	+	2710	7	FSM	ENSG00000164022.18	ENST00000673123.1	2710	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.272129668665	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATGTCATTCTTTTGGG	106308586	True	NA	-34	True	AATGAA	-24	NA	106316554	106349183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316810_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_108957.known	chr4	+	1716	7	FSM	ENSG00000164022.18	ENST00000672285.1	1716	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	250.272129668665	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACAGTAGTTTCTAATAA	106308611	True	NA	-28	True	AATGAA	-17	NA	106316579	106348379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_106316645_106324984_106325119_106327450_106327565_106328075_106328244_106331671_106331884_106336868_106337038_106347525
transcript_108970.known	chr4	-	2513	12	FSM	ENSG00000138801.9	ENST00000265174.5	2513	12	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_6	37.3358666987759	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTGATCTATTTTATA	-107716537	True	NA	-8	True	AATAAA	-21	NA	107720234	107613665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_107614388_107631630_107631861_107644801_107645071_107653490_107653627_107654694_107654901_107656895_107657008_107659958_107660073_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_108986.nnic	chr4	-	1150	6	NNC	ENSG00000138801.9	novel	579	5	NA	NA	-65	-10543	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	148.654498754663	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTTGTGTTCACAGTT	-107720263	False	NA	-21	True	AATAAA	-41	NA	107720299	107670502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_107670864_107682014_107682134_107687038_107687178_107693770_107694007_107701170_107701286_107720119
transcript_108987.known	chr4	-	2892	2	FSM	ENSG00000245293.4	ENST00000658105.2	2905	2	13	0	13	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTATTAGCTCACAATAAAA	-107989619	True	NA	NA	False	TTTAAA	-3	NA	107989679	107907769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_107910550_107989567
transcript_108988.known	chr4	+	4768	5	FSM	ENSG00000155016.18	ENST00000332884.11	4768	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	8.45576726264388	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGTCATGTCTGTTTT	107931276	True	NA	NA	False	ATTAAA	-14	NA	107931548	107953461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107932134_107944969_107945606_107947375_107947538_107949349_107949518_107950244
transcript_10899.known	chr1	-	3472	12	FSM	ENSG00000160691.19	ENST00000368445.9	3472	12	0	0	0	0	multi-exon	TRUE	canonical	3	416	junction_3	207.73946652096	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960448	True	NA	-14	True	ATTAAA	-17	NA	154970741	154962297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_108990.known	chr4	+	1964	9	FSM	ENSG00000138796.18	ENST00000639146.1	1964	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	144.566107283139	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGGTAATTTAGGCAG	107983024	True	NA	2	True	TATAAA	-32	NA	107989836	108035149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108027938_108028070_108033175_108033293_108034238
transcript_108992.known	chr4	+	1895	9	FSM	ENSG00000138796.18	ENST00000640060.1	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	143.160748810559	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAATCACTGTTGCAAAT	107983089	True	NA	-44	True	NA	NA	NA	107989901	108035022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108004663_108004918_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_108996.known	chr4	+	1803	8	FSM	ENSG00000138796.18	ENST00000309522.8	1803	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	29.4465964215956	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTCTCCTCTTCTTTG	107983076	True	NA	24	True	AGTAAA	-21	NA	107989888	108035171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_1090.nic	chr1	-	739	4	ISM	ENSG00000008128.23	ENST00000357760.6	2446	20	-335	16478	-302	-193	5prime_fragment	FALSE	canonical	3	63	junction_3	15.8954920234218	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGCATCATAGCCATTC	-1724643	True	NA	19	True	AAAAAG	-36	NA	1724659	1719358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1719456_1721595_1721712_1722707_1722832_1724257
transcript_10900.known	chr1	-	3481	12	FSM	ENSG00000160691.19	ENST00000448116.7	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_3	142.641375426175	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154960454	True	NA	-14	True	ATTAAA	-17	NA	154970747	154962297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031
transcript_109001.known	chr4	+	1507	7	FSM	ENSG00000138796.18	ENST00000639698.1	1507	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	125.001333326222	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAAATTGTAATACACTC	107983240	False	NA	-35	True	NA	NA	NA	107990052	108035112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108033175_108033293_108034238
transcript_109002.known	chr4	+	1327	7	FSM	ENSG00000138796.18	ENST00000639335.1	1327	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	131.77938213376	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGTATAGTCTGTGAAGC	107983016	True	NA	NA	False	NA	NA	NA	107989828	108034762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108023473_108023564_108027687_108027761_108033175_108033293_108034238
transcript_109005.known	chr4	+	1752	9	FSM	ENSG00000138796.18	ENST00000403312.6	1752	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	147.958978690041	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGTAATACACTCAAATGA	107983083	True	NA	-29	True	TATAAA	-1	NA	107989895	108035118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_107990065_108009758_108009888_108014430_108014589_108019539_108019667_108023473_108023564_108027687_108027761_108028860_108028870_108033175_108033293_108034238
transcript_109008.known	chr4	+	1676	3	FSM	ENSG00000232021.8	ENST00000512637.6	1676	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTGAGCCTCCTTTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	108172119	108176427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108173059_108173418_108173520_108175791
transcript_109016.known	chr4	+	549	6	FSM	ENSG00000109475.17	ENST00000506397.5	549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11991.0725558642	13883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTATGACTTTTTTTT	108452951	True	NA	13	True	AATAAA	-40	NA	108620632	108625252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620713_108621630_108621697_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_109048.known	chr4	+	853	6	FSM	ENSG00000109475.17	ENST00000394668.2	853	6	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_5	11285.2901885596	13495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTCTCTATGTGACCA	108452974	True	NA	39	True	TATAAA	-25	NA	108620655	108630412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127_108625254_108630020
transcript_109049.known	chr4	+	546	5	FSM	ENSG00000109475.17	ENST00000394667.8	546	5	0	0	0	0	multi-exon	FALSE	canonical	3	12803	junction_1	5372.7122282419	139973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTTTGGTTTGG	108452894	True	NA	131	True	NA	NA	NA	108620575	108625370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620601_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_109050.known	chr4	+	529	5	FSM	ENSG00000109475.17	ENST00000394665.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	3	2424	junction_1	9656.2793171076	46262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTATGACTTTTTTTTTTT	108452908	True	NA	16	True	AATAAA	-43	NA	108620589	108625255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108620713_108621950_108622025_108622104_108622205_108622514_108622619_108625127
transcript_109061.known	chr4	+	628	2	FSM	ENSG00000198856.13	ENST00000505745.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTATTCTGTCCTTTTCA	108622937	True	NA	NA	False	ATTAAA	-20	NA	108650632	108651496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108650795_108651030
transcript_109062.known	chr4	+	1062	4	FSM	ENSG00000198856.13	ENST00000361564.9	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	2286	junction_3	106.220943739401	19171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTTATATTTGTTTTT	108622903	True	NA	18	True	AATAAA	-17	NA	108650598	108667820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108650795_108655563_108655658_108657449_108657648_108667246
transcript_109063.known	chr4	+	876	3	FSM	ENSG00000198856.13	ENST00000613215.4	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	1246	908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACCTTTTATATTTGTTT	108622889	True	NA	16	True	AATAAA	-15	NA	108650584	108667818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_108650795_108655563_108655658_108667246
transcript_109064.known	chr4	-	2086	13	FSM	ENSG00000164089.9	ENST00000296486.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	2.782634642844	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAAAAATTACTAG	-108762927	True	NA	NA	False	AATAAA	-14	NA	108763053	108742052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_108742613_108743788_108743857_108746398_108746530_108746761_108746852_108748004_108748160_108749237_108749464_108750935_108751019_108752894_108753012_108754619_108754711_108756417_108756493_108759748_108759909_108760187_108760307_108762842
transcript_109068.known	chr4	+	5083	24	FSM	ENSG00000138802.11	ENST00000265175.5	5083	24	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	24.6222116823112	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATATATATGAATCAATA	109431236	True	NA	NA	False	NA	NA	NA	109433814	109540896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109434003_109462900_109463645_109473003_109473187_109481676_109481782_109491326_109491408_109494614_109494857_109506327_109506513_109510008_109510112_109511956_109512084_109513746_109513857_109516527_109516641_109520365_109520485_109521116_109521173_109521419_109521627_109524817_109524942_109525345_109525505_109526225_109526400_109527321_109527433_109530288_109530465_109531384_109531523_109532638_109532744_109533592_109533686_109538492_109538597_109539560
transcript_109072.known	chr4	-	957	3	FSM	ENSG00000247950.8	ENST00000499359.2	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCACTTATGTTGATG	-109433649	True	NA	NA	False	AATAAA	-24	NA	109433817	109429962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109430781_109431691_109431747_109433733
transcript_109074.known	chr4	+	2230	8	FSM	ENSG00000005059.16	ENST00000394650.7	2230	8	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_4	33.3839751365587	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATACAAGTTAAATCAG	109558027	True	NA	86	True	AATAAA	-18	NA	109560245	109688719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109560437_109659010_109659087_109660194_109660366_109664289_109664395_109682581_109682743_109684442_109684647_109685250_109685368_109687514
transcript_109081.known	chr4	-	1634	7	FSM	ENSG00000138794.10	ENST00000265164.7	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_2	32.3625297733866	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTACATTTTTCTA	-109698229	True	NA	-26	True	AATAAA	-15	NA	109703445	109688627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109696409_109696487_109697621_109697769_109698299_109698343_109703355
transcript_109090.known	chr4	-	1347	4	FSM	ENSG00000138794.10	ENST00000352981.7	1347	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	191.942699783034	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACATTTTTCTAACTCAC	-109698203	True	NA	-20	True	AATAAA	-21	NA	109703419	109688621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109689569_109690849_109691010_109694524_109694701_109703355
transcript_109097.known	chr4	-	5219	4	FSM	ENSG00000123739.11	ENST00000243501.10	5219	4	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_3	60.3176775267601	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTAGTGTCATCTTTTAT	-109724255	True	NA	-5	True	AATAAA	-13	NA	109730070	109709988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109714496_109717547_109717714_109718682_109718760_109729601
transcript_10910.known	chr1	-	3062	13	FSM	ENSG00000160691.19	ENST00000368453.8	3062	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	258.538990719431	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966081_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_109103.known	chr4	-	755	3	FSM	ENSG00000123739.11	ENST00000507961.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	236.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAATTTATATCTTG	-109724141	True	NA	11	True	CATAAA	-37	NA	109729956	109714261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109714496_109717547_109717714_109729601
transcript_109106.known	chr4	-	364	1	FSM	ENSG00000272795.1	ENST00000609440.1	364	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTGTGTGTGTAATTT	-109815385	True	NA	NA	False	ATTAAA	-14	NA	109815410	109815046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_109815000_109815400
transcript_10911.known	chr1	-	3059	13	FSM	ENSG00000160691.19	ENST00000368450.5	3059	13	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_12	291.566304161201	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGCCTCTTAACCCTTC	-154969137	True	NA	-14	True	ATTAAA	-17	NA	154974376	154962297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_154963932_154965542_154965782_154965945_154966078_154966161_154966232_154966318_154966518_154967670_154967798_154967979_154968032_154968203_154968258_154968494_154968615_154968770_154968835_154969377_154969449_154970031_154970200_154974247
transcript_109111.known	chr4	+	1011	7	FSM	ENSG00000109534.17	ENST00000394631.7	1011	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	146.820090208694	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAGAGTGTGTTTATTAA	109812511	True	NA	21	True	AATAAA	-21	NA	109815509	109824740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109815546_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_109126.nnic	chr4	+	1039	6	NIC	ENSG00000109534.17	novel	1015	7	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	1	10	junction_1	155.900481076872	1691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109812513	True	NA	18	True	AATAAA	-18	NA	109815511	109824737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_109815805_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_109140.known	chr4	+	1015	7	FSM	ENSG00000109534.17	ENST00000226796.7	1015	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	73.5746031061142	2955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTTAGAGTGTGTTTAT	109813084	True	NA	18	True	AATAAA	-18	NA	109815761	109824737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_109815805_109816152_109816379_109817935_109818091_109819000_109819061_109822346_109822489_109823964_109824034_109824417
transcript_109143.known	chr4	-	610	5	FSM	ENSG00000170522.10	ENST00000506625.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	131.744070075279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTCCTGCACTGGTATC	-110198892	False	NA	NA	False	NA	NA	NA	110199009	110051725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246_110198368_110198841
transcript_109147.known	chr4	-	6570	4	FSM	ENSG00000170522.10	ENST00000302274.8	6570	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	6.16441400296898	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTTTCTGTTTTCTCTT	-110183687	True	NA	0	True	AATAAA	-27	NA	110198615	110045845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110051763_110059602_110059755_110105496_110105629_110198246
transcript_109152.nic	chr4	-	789	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	78	324	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	5.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGGAGCCACGCCATT	-110198984	False	NA	-17	True	AATAAA	-14	NA	110199101	110197566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_110197975_110198246_110198368_110198841
transcript_109154.nic	chr4	-	691	3	NIC	ENSG00000170522.10	novel	204	2	NA	NA	-62	324	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	8.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGAGTGGAGCCACGCCATT	NA	False	NA	-17	True	AATAAA	-14	NA	110199261	110197566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_110197975_110198246_110198368_110199099
transcript_109157.known	chr4	-	493	4	FSM	ENSG00000250103.3	ENST00000503456.1	493	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTCTCCAGGGCAGAAGA	-110615046	False	576	NA	False	NA	NA	NA	110615415	110603360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110603433_110604050_110604274_110606209_110606299_110615306
transcript_109158.nnic	chr4	-	796	3	NNC	ENSG00000250103.3	novel	602	2	NA	NA	31	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACATTTCTAAATTATTTT	-110614996	True	NA	-10	True	AATAAA	-23	NA	110615572	110595508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_110595809_110603202_110603433_110615306
transcript_109168.known	chr4	-	448	2	FSM	ENSG00000250103.3	ENST00000513690.3	602	2	145	9	-43	-9	multi-exon	FALSE	canonical	3	25	junction_1	0	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACTACATTTCTAAATTA	-110615089	False	NA	-14	True	AATAAA	-19	NA	110615458	110595512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110595809_110615306
transcript_109169.nnic	chr4	-	1436	2	FSM	ENSG00000250103.3	ENST00000690430.1	1194	2	-245	3	-245	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTAAATAGCGTGAC	-110615479	False	407	NA	False	AATAAA	-19	NA	110615848	110602538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110603433_110615306
transcript_109170.nnic	chr4	-	919	2	FSM	ENSG00000250103.3	ENST00000690430.1	1194	2	-245	520	-245	305	multi-exon	FALSE	canonical	2	4	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTGGGATAGTCTTTTG	-110615479	False	407	NA	False	AATAAA	-16	NA	110615848	110603055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110603433_110615306
transcript_109171.nic	chr4	-	666	2	ISM	ENSG00000250103.3	ENST00000503456.1	493	4	-437	2818	-249	-2818	5prime_fragment	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCACCTCATTGTGCTA	-110615483	False	407	NA	False	AATATA	-17	NA	110615852	110606178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_110606299_110615306
transcript_109178.known	chr4	-	1608	3	FSM	ENSG00000164093.18	ENST00000645131.1	1608	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110621723	False	NA	-2	True	AGTAAA	-17	NA	110621734	110617422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110618689_110621163_110621370_110621598
transcript_109180.known	chr4	-	2294	3	FSM	ENSG00000164093.18	ENST00000644743.1	2294	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	6.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110622708	True	NA	-2	True	AGTAAA	-17	NA	110623077	110617422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110618689_110621163_110621370_110622255
transcript_109184.nnic	chr4	+	697	2	Genic_Genomic	ENSG00000289096.1	novel	797	1	NA	NA	-2	-3	multi-exon	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTCTTCTTTTTTTCTT	110619467	True	NA	5	True	AATAAA	-13	NA	110619746	110620542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr4_+_110619819_110619917
transcript_109188.nnic	chr4	-	1799	2	NNC	ENSG00000164093.18	novel	1608	3	NA	NA	896	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	0	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110619809	False	NA	-2	True	AGTAAA	-17	NA	110619820	110617422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_110618689_110619287
transcript_109189.nic	chr4	-	1695	2	ISM	ENSG00000164093.18	ENST00000645131.1	1608	3	142	0	142	0	3prime_fragment	FALSE	canonical	3	49	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCTGGATTCTTTCTCC	-110621581	False	NA	-2	True	AGTAAA	-17	NA	110621592	110617422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_110618689_110621163
transcript_109190.known	chr4	-	1889	2	FSM	ENSG00000164093.18	ENST00000557119.2	1889	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGCTTTGCTGTTAAAAAAA	-110623039	False	NA	NA	False	AAAACA	-28	NA	110623051	110620276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110621370_110622255
transcript_109191.known	chr4	-	1398	1	FSM	ENSG00000164093.18	ENST00000607868.1	1398	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAATTGGTCTGGATTCT	-110618457	False	NA	-8	True	AGTAAA	-11	NA	110618826	110617428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_110617400_110618800
transcript_109193.known	chr4	-	2036	1	FSM	ENSG00000260526.1	ENST00000562919.1	2036	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTAACAGTAATTATTTCA	-112231410	False	186	NA	False	AATAAA	-23	NA	112231596	112229560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112229600_112231600
transcript_109198.known	chr4	+	5915	10	FSM	ENSG00000138660.12	ENST00000274000.10	5915	10	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_9	20.6062438098412	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCATCTGATTCTTGA	112227910	True	NA	NA	False	AATAAA	-18	NA	112231786	112273110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_1092.known	chr1	-	2984	20	FSM	ENSG00000008128.23	ENST00000404249.8	2984	20	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_16	60.8659122972653	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTGTCGTCCTTTGAGTG	-1724341	False	NA	NA	False	ATTAAA	-21	NA	1724357	1702378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703941_1704038_1704147_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707408_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719327_1719456_1721595_1721712_1722707_1722832_1724257
transcript_10920.known	chr1	+	912	3	FSM	ENSG00000173207.13	ENST00000368439.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	2364	2733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGTAATTGTACGGGT	154939924	True	NA	40	True	ATTAAA	-20	NA	154974652	154979248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154974913_154977986_154978115_154978724
transcript_109200.nic	chr4	+	1122	9	ISM	ENSG00000138660.12	ENST00000274000.10	5915	10	-60	6280	-13	0	5prime_fragment	FALSE	canonical	3	293	junction_6	19.1229574072631	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACACTTTTTAGACCA	112227850	True	NA	NA	False	AATAAA	-21	NA	112231726	112266830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112262987_112263087_112265008_112265068_112265733_112265808_112266587
transcript_109201.known	chr4	+	2337	9	FSM	ENSG00000138660.12	ENST00000309703.10	2337	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	104.304542087102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTGGCCCTTTCAATAT	112227956	True	NA	NA	False	TATAAA	-39	NA	112231832	112269677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112232175_112253207_112253257_112254746_112254774_112257771_112257798_112260765_112260863_112265008_112265068_112265733_112265808_112266587_112266717_112268143
transcript_109203.known	chr4	+	333	3	FSM	ENSG00000138660.12	ENST00000512741.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_1	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAACACTTTTTAGACCA	112265040	False	NA	NA	False	AATAAA	-21	NA	112265051	112266830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112265068_112265733_112265808_112266587
transcript_109204.known	chr4	-	4163	2	FSM	ENSG00000145365.11	ENST00000361717.4	4163	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTTTGTTATTATTTTA	-112285692	True	NA	0	True	NA	NA	NA	112285904	112274536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112278435_112285639
transcript_109209.nic	chr4	-	655	4	NIC	ENSG00000138658.16	novel	731	6	NA	NA	-28	-9589	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	37.1064534668687	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTAGTTTTTTTTTGT	-112637010	False	NA	NA	False	ATTAAA	-14	NA	112637023	112629701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_112630016_112631929_112632011_112633155_112633243_112636850
transcript_109226.known	chr4	+	2020	13	FSM	ENSG00000174720.17	ENST00000509622.5	2020	13	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	121.166552040294	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635413	True	NA	17	True	AATAAA	-17	NA	112637126	112657586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637240_112644667_112644769_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_109232.known	chr4	+	2107	13	FSM	ENSG00000174720.17	ENST00000344442.10	2107	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	96.0167809407409	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAAATGTGTTGATTTT	112635429	True	NA	17	True	AATAAA	-17	NA	112637142	112657586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637240_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_109236.known	chr4	+	2164	13	FSM	ENSG00000174720.17	ENST00000324052.10	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	112.186940961157	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTTGATTTTGTTTTT	112635742	False	NA	23	True	AATAAA	-23	NA	112637455	112657592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198_112647550_112647689_112647835_112649534_112649687_112650460_112650583_112653076_112653237_112654067_112654160_112657246
transcript_109272.known	chr4	+	1047	7	FSM	ENSG00000174720.17	ENST00000505034.5	1047	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	140.094511749113	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATGCAGAATCCCT	112635742	False	NA	NA	False	NA	NA	NA	112637455	112647449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637604_112644667_112644872_112646350_112646452_112646587_112646672_112646790_112646956_112647033_112647128_112647198
transcript_1093.known	chr1	-	5079	20	FSM	ENSG00000268575.1	ENST00000598846.1	5079	20	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_18	75.5903084848984	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAAAGAGCTGTGTTTTCT	-1737637	False	NA	NA	False	ATTAAA	-19	NA	1737688	1702735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1703000_1703079_1703270_1703475_1703625_1703823_1703996_1704222_1704345_1704549_1704656_1704903_1705026_1705641_1705733_1707524_1707585_1708179_1708246_1708793_1708953_1709037_1709134_1709517_1709641_1712263_1712401_1716345_1716479_1719357_1719456_1721595_1721712_1722587_1722832_1734689_1734836_1735203
transcript_10931.known	chr1	+	390	3	FSM	ENSG00000173207.13	ENST00000473344.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2418	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTAACTGCTTTGCTTCTT	154975512	False	NA	NA	False	AATACA	-15	NA	154975538	154978916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154975609_154977986_154978115_154978724
transcript_10932.known	chr1	+	779	3	FSM	ENSG00000173207.13	ENST00000308987.6	779	3	0	0	0	0	multi-exon	FALSE	canonical	3	4039	junction_1	398.5	60586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAATTGTACGGGTTTT	154939952	True	NA	43	True	ATTAAA	-23	NA	154974680	154979251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154974805_154977986_154978115_154978724
transcript_109337.known	chr4	+	424	2	FSM	ENSG00000174720.17	ENST00000504079.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTGGCTCACGCCTGTA	112635479	False	NA	NA	False	ATTAAA	-19	NA	112637192	112638020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_112637240_112637643
transcript_109343.known	chr4	-	345	3	FSM	ENSG00000249532.6	ENST00000509938.2	389	3	41	3	0	2	multi-exon	FALSE	canonical	3	9509	junction_2	2432.5	73864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGTTTCTGTGCCAGTT	-112646290	True	NA	-16	True	AATAAA	-15	NA	112648699	112646722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112646969_112647414_112647468_112648653
transcript_109344.known	chr4	-	294	2	FSM	ENSG00000249532.6	ENST00000505215.2	336	2	37	5	-3	0	multi-exon	FALSE	canonical	3	7130	junction_1	0	39713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATTGTTTCTGTGCCAG	-112646294	True	NA	-18	True	AATAAA	-13	NA	112648703	112646724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112646969_112648653
transcript_109345.known	chr4	-	740	2	FSM	ENSG00000250046.3	ENST00000505632.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAAATATATTTTATATA	-112706197	True	NA	-28	True	TTTAAA	-8	NA	112706810	112693046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112693686_112706709
transcript_109348.known	chr4	-	796	1	FSM	ENSG00000241741.1	ENST00000482859.1	796	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	243	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGCACTGTTGAGTTTTC	NA	False	NA	NA	False	ACTAAA	-10	NA	112788878	112788082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_112788100_112788900
transcript_109350.known	chr4	-	348	1	FSM	ENSG00000196656.7	ENST00000485827.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9656	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	113214393	113214045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113214000_113214400
transcript_109351.known	chr4	-	5294	18	FSM	ENSG00000145349.18	ENST00000394524.7	5294	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	10.2548832152193	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTCATGGCTCTGTGGTC	-113761344	False	597	-5	True	AATAAA	-21	NA	113761445	113451031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113454516_113457334_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_109352.known	chr4	-	1642	17	FSM	ENSG00000145349.18	ENST00000379773.6	1642	17	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_16	8.15092019345055	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATTCTCTGGAAAGATC	-113761029	False	NA	NA	False	AATAAA	-20	NA	113761130	113457187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_113457564_113460146_113460242_113465528_113465605_113500462_113500512_113509637_113509676_113513327_113513371_113513829_113513914_113515068_113515192_113517562_113517658_113531215_113531300_113537340_113537444_113548656_113548730_113552030_113552097_113609151_113609207_113661712_113661773_113759319_113759415_113761003
transcript_109355.known	chr4	+	3733	6	FSM	ENSG00000174607.11	ENST00000310836.11	3733	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	36.3262990132493	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTGTTGTTGGAATAAAA	114598168	False	NA	NA	False	AATAAA	-17	NA	114598806	114678225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_114598975_114622878_114623703_114663994_114664138_114665679_114665757_114668084_114668305_114675924
transcript_109365.known	chr4	-	2023	1	FSM	ENSG00000174599.5	ENST00000310754.5	2023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGAACTTAGTCTTTTTT	-117085415	True	NA	NA	False	ATTAAA	-18	NA	117085576	117083553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_117083600_117085600
transcript_109367.known	chr4	+	473	4	FSM	ENSG00000269893.9	ENST00000688996.1	528	4	49	6	0	0	multi-exon	FALSE	canonical	3	136	junction_1	269.148038571093	4389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCATTGTTCCTTGACTG	118267149	True	NA	18	True	AATAAA	-19	NA	118278754	118279821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278793_118278943_118279138_118279388_118279432_118279623
transcript_109368.known	chr4	+	309	4	FSM	ENSG00000269893.9	ENST00000602483.6	353	4	41	3	0	-1	multi-exon	FALSE	canonical	3	46	junction_1	309.678327731643	1153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278793_118279106_118279138_118279388_118279432_118279623
transcript_109372.known	chr4	+	327	3	FSM	ENSG00000269893.9	ENST00000602520.6	335	3	4	4	1	0	multi-exon	FALSE	canonical	3	146	junction_1	318	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTTCCTTGACTGAG	118267103	True	NA	20	True	AATAAA	-21	NA	118278708	118279823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278793_118279388_118279432_118279623
transcript_109379.known	chr4	+	1105	1	FSM	ENSG00000269893.9	ENST00000667980.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCATTGTTCCTTGACTGA	118267112	True	NA	19	True	AATAAA	-20	NA	118278717	118279822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118278700_118279800
transcript_109380.known	chr4	+	131	1	FSM	ENSG00000275994.1	ENST00000384096.1	131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGTTAAAAACCTAGAGGG	118279160	False	NA	NA	False	NA	NA	NA	118279189	118279320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118279200_118279300
transcript_109381.known	chr4	+	815	2	FSM	ENSG00000269893.9	ENST00000652022.2	818	2	0	3	0	-1	multi-exon	FALSE	canonical	3	573	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTCATTGTTCCTTGACT	118267149	True	NA	17	True	AATAAA	-18	NA	118278754	118279820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118279138_118279388
transcript_109387.known	chr4	+	6625	11	FSM	ENSG00000145388.15	ENST00000628452.2	6625	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	70.8226658634084	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGCTCATAATTCATGAA	118681913	True	NA	NA	False	AATAAA	-20	NA	118685412	118715433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_118685601_118687922_118688012_118689369_118689469_118691541_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118705610_118705822_118709997
transcript_109393.nic	chr4	+	2480	10	NIC	ENSG00000145388.15	novel	6642	11	NA	NA	-31	847	combination_of_known_junctions	FALSE	canonical	2	26	junction_9	69.1778884247964	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGAGAGTCTGTTTTCT	118681861	True	NA	4	True	AATGAA	-16	NA	118685360	118711448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_118685601_118687922_118688012_118689369_118689458_118691531_118691613_118691980_118692069_118694435_118694527_118697181_118697324_118700549_118700643_118703934_118704052_118709997
transcript_1094.nic	chr1	-	3330	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1779991	False	NA	NA	False	AATAAA	-20	NA	1780181	1751231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_109401.known	chr4	-	4018	23	FSM	ENSG00000150961.15	ENST00000280551.11	4018	23	0	0	0	0	multi-exon	TRUE	canonical	3	300	junction_18	33.0961846444047	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGATTTATTTATTT	-118827149	True	NA	-1	True	AATAAA	-19	NA	118836126	118722822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_118723656_118728560_118728651_118731315_118731508_118732732_118732913_118738260_118738380_118739148_118739288_118740662_118740809_118740940_118741038_118743987_118744159_118744943_118745061_118751995_118752090_118752696_118752889_118757720_118757846_118764801_118764918_118768172_118768312_118797682_118797811_118805842_118805955_118815027_118815156_118815450_118815727_118817263_118817413_118824619_118824750_118833578_118833738_118835940
transcript_109404.nnic	chr4	+	732	3	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-259	-185851	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAATATTTATTAAC	NA	False	NA	NA	False	AATAAA	-15	NA	118850428	118851596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850589_118850711_118850941_118851253
transcript_109405.nnic	chr4	+	857	3	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-280	-185747	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGAGAATAGTGGCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	118850407	118851700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850589_118850711_118850941_118851253
transcript_109407.nnic	chr4	+	1218	2	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-432	-185851	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAATATTTATTAAC	NA	False	NA	NA	False	AATAAA	-15	NA	118850255	118851596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850589_118850711
transcript_109410.nnic	chr4	+	835	2	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-239	-185851	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTACAATATTTATTAAC	118850318	True	NA	NA	False	AATAAA	-15	NA	118850448	118851596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850941_118851253
transcript_109411.nnic	chr4	+	1114	2	NNC	ENSG00000172403.11	novel	3934	5	NA	NA	-414	-185747	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTGAGAATAGTGGCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	118850273	118851700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_118850941_118851253
transcript_109422.known	chr4	+	504	4	FSM	ENSG00000145390.12	ENST00000514305.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.29983164553722	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGACTTGGTTTTCCTT	119209649	True	NA	NA	False	AATATA	-10	NA	119212742	119220211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119212874_119214069_119214223_119217549_119217674_119220115
transcript_109425.known	chr4	+	503	4	FSM	ENSG00000145390.12	ENST00000507597.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.5193489244852	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCCAACTCTACATCT	119209647	True	NA	NA	False	AAAACA	-32	NA	119212740	119239341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119212874_119217549_119217674_119235289_119235412_119239217
transcript_109430.nic	chr4	+	588	3	NIC	ENSG00000145390.12	novel	504	4	NA	NA	-2	79	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	16.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGAAATTGCTGAGTTTT	119212449	False	NA	NA	False	ATTAAA	-15	NA	119212584	119220290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_119212874_119217549_119217674_119220115
transcript_109435.nic	chr4	+	370	2	ISM	ENSG00000145390.12	ENST00000514305.5	504	4	-173	6076	-17	-6076	5prime_fragment	FALSE	canonical	2	4	junction_1	0	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACCAAAGGGAACAAAACT	119212434	False	NA	NA	False	ATTAAA	-13	NA	119212569	119214135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_119212874_119214069
transcript_109437.nnic	chr4	+	378	2	NNC	ENSG00000145390.12	novel	6631	19	NA	NA	48	-6077	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACCAAAGGGAACAAAAC	119213215	False	NA	NA	False	ATTAAA	-12	NA	119213226	119214134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_119213540_119214069
transcript_10944.known	chr1	+	1730	8	FSM	ENSG00000160688.19	ENST00000315144.14	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_3	137.474153414898	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974971	True	NA	22	True	AATAAA	-18	NA	154983358	154993111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983398_154983841_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_109446.nic	chr4	-	1013	2	FSM	ENSG00000283050.3	ENST00000690009.1	1175	2	-27	189	-21	0	multi-exon	FALSE	canonical	3	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTAAGCTTGTATACATTT	-119453905	True	NA	NA	False	AATAAA	-19	NA	119454674	119449566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_119450151_119454245
transcript_109447.known	chr4	-	939	2	FSM	ENSG00000283050.3	ENST00000635323.2	1137	2	2	196	2	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACATTAAGCTTGTATACA	-119453859	True	NA	NA	False	AATAAA	-16	NA	119454628	119449569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_119450126_119454245
transcript_109453.nic	chr4	-	1666	9	ISM	ENSG00000138735.16	ENST00000354960.8	6959	21	-28	58038	-28	0	5prime_fragment	FALSE	canonical	3	75	junction_7	2.63391343821318	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGAATGATAGAATAATT	-119627003	True	NA	NA	False	AATAAA	-21	NA	119628832	119552440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_119552638_119553637_119553747_119560295_119560364_119562832_119562971_119565320_119565411_119567072_119567145_119596522_119596613_119606708_119607298_119628519
transcript_109466.nic	chr4	+	1457	9	FSM	ENSG00000245958.7	ENST00000686002.1	1438	9	-29	10	-6	0	multi-exon	TRUE	canonical	3	69	junction_7	23.5607592195158	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATGTA	119451267	True	NA	58	True	AATAAA	-22	NA	119454755	119499974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810_119497904_119499560
transcript_109468.known	chr4	+	979	8	ISM	ENSG00000245958.7	ENST00000686002.1	1438	9	35	2081	5	-389	5prime_fragment	FALSE	canonical	3	69	junction_7	23.5476070104452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGTGAGATGAAAGTGAT	119451331	True	NA	NA	False	NA	NA	NA	119454819	119497903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119493332_119493438_119494432_119494524_119497810
transcript_109470.nnic	chr4	+	1864	6	FSM	ENSG00000245958.7	ENST00000693650.1	1806	6	-58	0	-6	0	multi-exon	FALSE	canonical	3	15	junction_5	43.6467639121161	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTAGTTAACTGCTTTGT	119451267	True	NA	11	True	AATAAA	-22	NA	119454755	119480935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_119455134_119460182_119460243_119460730_119460828_119461716_119461852_119462895_119462980_119479825
transcript_109472.nnic	chr4	+	743	2	NNC	ENSG00000250392.2	novel	642	2	NA	NA	14722	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTCTGTTTCGTGTTG	NA	False	NA	NA	False	AATAAA	-28	NA	119954261	119964293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_119954499_119963787
transcript_109473.nnic	chr4	-	1420	2	Antisense	novelGene_ENSG00000250392.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGAGAATATG	-119997385	False	NA	NA	False	NA	NA	NA	119997453	119955318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_119955590_119996304
transcript_109478.known	chr4	-	764	3	FSM	ENSG00000164109.14	ENST00000504707.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	626	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGTGCTATAAAGCTAG	-120049005	True	NA	NA	False	NA	NA	NA	120066858	120059827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120060291_120060873_120060978_120066661
transcript_109481.known	chr4	-	5227	5	FSM	ENSG00000164109.14	ENST00000296509.11	5227	5	0	0	0	0	multi-exon	FALSE	canonical	3	1253	junction_1	75.2944221041639	3138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGAAATGGAAACTGTC	-120048995	True	NA	-12	True	GATAAA	-17	NA	120066848	120055622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120060291_120060873_120060978_120061974_120062096_120065671_120065819_120066661
transcript_109482.known	chr4	-	1277	4	FSM	ENSG00000164109.14	ENST00000333047.9	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	615.061153237808	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTGTCTTAAAACATTT	-120048980	True	NA	-22	True	AATAAA	-15	NA	120066833	120059436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120060291_120060873_120060978_120065671_120065819_120066661
transcript_109485.known	chr4	+	651	4	FSM	ENSG00000250938.7	ENST00000511064.6	651	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGTACCCTAAAACTTAG	120066807	True	NA	NA	False	AAGAAA	-44	NA	120066957	120165970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_120067002_120083284_120083332_120150542_120150622_120165489
transcript_109486.known	chr4	-	5207	16	FSM	ENSG00000138738.11	ENST00000264808.8	5207	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	25.5281979169876	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGGTGTTAGCATTTTA	-120921543	True	NA	0	True	AATAAA	-20	NA	120922726	120691914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120816831_120816925_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_109489.known	chr4	-	2338	15	FSM	ENSG00000138738.11	ENST00000428209.6	2338	15	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	17.4700910596554	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-120922839	False	NA	-48	True	TATAAA	-36	NA	120922858	120694822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120695276_120710308_120710414_120754552_120754639_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_109491.known	chr4	-	2259	14	FSM	ENSG00000138738.11	ENST00000515109.5	2259	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	22.8519806089424	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCTCTGTAATGAAGTTT	-120922846	False	NA	-48	True	TATAAA	-36	NA	120922865	120694822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120695276_120710308_120710414_120777187_120777282_120781142_120781304_120784997_120785092_120798266_120798425_120799660_120799746_120811369_120811450_120816452_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_109496.known	chr4	-	1249	6	FSM	ENSG00000138738.11	ENST00000512845.5	1249	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	20.1930681175496	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATCCAACTTGTGAAAAT	-120921512	True	NA	NA	False	NA	NA	NA	120922695	120816062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120816575_120818352_120818528_120821170_120821346_120853417_120853541_120907473_120907558_120922515
transcript_1095.known	chr1	-	3098	12	FSM	ENSG00000008130.15	ENST00000341991.7	3098	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	178.077334857872	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGTTAATAACAGCTTT	-1778646	False	NA	NA	False	AATAAA	-20	NA	1778790	1751231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1778745
transcript_109503.known	chr4	-	2492	4	FSM	ENSG00000138738.11	ENST00000394435.2	2492	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4264860903284	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAACAAAACAGAAAAAAC	-120922851	False	218	NA	False	NA	NA	NA	120922870	120837344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_120839275_120853417_120853541_120907473_120907558_120922515
transcript_109508.nic	chr4	-	1179	3	ISM	ENSG00000138738.11	ENST00000394435.2	2492	4	-3	15459	-3	-15459	5prime_fragment	FALSE	canonical	3	87	junction_1	9.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGATATATCCTTATAT	-120922854	False	NA	NA	False	NA	NA	NA	120922873	120852803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_120853541_120907473_120907558_120922515
transcript_109509.nnic	chr4	-	631	3	NNC	ENSG00000138738.11	novel	5207	16	NA	NA	-3	4298	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	46	168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGTGATTTGTGTTT	-120922854	False	NA	NA	False	AATAAA	-30	NA	120922873	120881206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_120881396_120907473_120907558_120922515
transcript_109510.nnic	chr4	-	1585	3	NNC	ENSG00000251609.2	novel	805	3	NA	NA	-25790	990	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	48	37	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGACTTTATCACTAGCT	-120922854	False	NA	NA	False	AATAAA	-23	NA	120922873	120894503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_120895647_120907473_120907558_120922515
transcript_109512.known	chr4	-	2902	4	FSM	ENSG00000173376.14	ENST00000379692.9	2902	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	2.94392028877595	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACCTTGGTGTATTCAAT	-121072415	True	NA	NA	False	ATTAAA	-36	NA	121072535	121035612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121037658_121039929_121040055_121045649_121045839_121071992
transcript_109514.known	chr4	-	2339	6	FSM	ENSG00000186867.11	ENST00000394427.3	2339	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.57681974534503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATTGCTAGATTGAAT	-121380935	True	NA	NA	False	NA	NA	NA	121381018	121328641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121329715_121330425_121330524_121332820_121333057_121336806_121336869_121340451_121340611_121380307
transcript_109515.known	chr4	-	1215	6	FSM	ENSG00000186867.11	ENST00000334383.9	1215	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.93907194296653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAACAATATCTTCATAA	-121380596	False	NA	NA	False	NA	NA	NA	121380679	121329313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121329715_121330425_121330524_121332933_121333057_121336806_121336869_121340451_121340611_121380307
transcript_109517.known	chr4	-	1638	13	FSM	ENSG00000164111.15	ENST00000296511.10	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_4	170.52881395497	2270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCTTTTTAAGCTAATAA	-121671536	True	NA	42	True	ATTAAA	-17	NA	121696980	121667945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_109518.known	chr4	-	1363	11	FSM	ENSG00000164111.15	ENST00000501272.6	1363	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	787.989314648365	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAATAAACATTTCTG	-121671522	True	NA	-39	True	ACTAAA	-41	NA	121696966	121668026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678414_121678495_121681670_121681762_121683363_121683478_121696580_121696625_121696862
transcript_109519.known	chr4	-	1606	13	FSM	ENSG00000164111.15	ENST00000506395.5	1606	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	718.056302922457	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAAAATAAACATTTCTG	-121671522	True	NA	-39	True	ACTAAA	-41	NA	121696966	121668026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121668528_121669601_121669725_121669953_121670013_121671546_121671643_121672532_121672627_121677893_121677951_121678351_121678495_121681670_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_109520.known	chr4	-	868	6	FSM	ENSG00000164111.15	ENST00000513428.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	2304	junction_1	140.903655027114	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTCCTTTAAAAATA	-121671548	True	NA	NA	False	NA	NA	NA	121696992	121681361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121681762_121683363_121683478_121684676_121684772_121686287_121686373_121696580_121696625_121696862
transcript_109526.known	chr4	+	1529	13	FSM	ENSG00000123737.13	ENST00000379663.7	1529	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	187.800037717426	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGAACCCTGGGTATT	121795973	True	NA	14	True	ATTAAA	-17	NA	121801319	121816909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816143_121816195_121816368_121816448_121816771
transcript_109530.known	chr4	+	1587	12	FSM	ENSG00000123737.13	ENST00000243498.10	1587	12	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_10	60.5629240426438	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTCTGTTAATTTGC	121795976	True	NA	13	True	AATAAA	-13	NA	121801322	121817021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_121801491_121801826_121801922_121802673_121802794_121802914_121803018_121804621_121804760_121807539_121807623_121809966_121810100_121811582_121811672_121813233_121813381_121813865_121814048_121816368_121816448_121816771
transcript_109543.known	chr4	-	2748	8	FSM	ENSG00000145386.11	ENST00000274026.10	2748	8	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_6	56.4113897892897	682	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTGGATTCTTGTCT	-121807770	True	NA	-10	True	AATAAA	-20	NA	121823883	121816443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121817687_121818043_121818178_121818799_121818914_121819371_121819580_121820541_121820766_121820978_121821092_121822402_121822647_121823415
transcript_109553.known	chr4	-	3840	19	FSM	ENSG00000138686.10	ENST00000264499.9	3840	19	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	63.2667535026528	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACACATAAGAAAACGGAG	-121867272	True	NA	NA	False	NA	NA	NA	121870474	121824328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121825994_121828145_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_109556.known	chr4	-	2570	18	FSM	ENSG00000138686.10	ENST00000506636.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_12	63.8638798986512	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTGTGTCAATTTAT	-121867248	True	NA	-2	True	AATAAA	-13	NA	121870450	121827726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121828270_121828401_121828506_121828618_121828729_121833230_121833396_121835143_121835284_121839630_121839697_121843926_121844002_121845503_121845697_121847403_121847507_121848843_121848929_121852955_121853087_121854703_121854821_121855488_121855562_121858991_121859179_121861503_121861680_121863216_121863280_121867980_121868047_121870277
transcript_109564.known	chr4	-	725	4	FSM	ENSG00000138686.10	ENST00000502444.1	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	13.4412301024373	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGACAACTTGGTTC	-121867285	True	NA	NA	False	TTTAAA	-24	NA	121870487	121861293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_121861680_121863216_121863280_121867980_121868047_121870277
transcript_109570.known	chr4	-	1385	3	FSM	ENSG00000224786.3	ENST00000641807.2	1455	3	0	70	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAGAGAAGTTTTAAAAA	NA	False	NA	NA	False	ACTAAA	-1	NA	122732474	122729580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122730636_122732051_122732194_122732286
transcript_109571.known	chr4	-	1253	3	FSM	ENSG00000224786.3	ENST00000641995.1	1253	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAGAGAAGTTTTAAAAA	NA	False	NA	NA	False	ACTAAA	-1	NA	122732474	122729580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122730636_122732051_122732194_122732418
transcript_109574.known	chr4	-	2168	2	FSM	ENSG00000224786.3	ENST00000642099.1	2168	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAAGCCCCAGTTCTTC	NA	False	NA	NA	False	AATAAA	-12	NA	122732482	122728531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122730636_122732418
transcript_109575.known	chr4	+	3238	2	FSM	ENSG00000181004.10	ENST00000314218.8	3238	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTACTGATATGTGGTGTTA	122732267	True	NA	2	True	AATAAA	-16	NA	122732703	122744939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_122732885_122741882
transcript_109576.known	chr4	-	1227	5	FSM	ENSG00000170917.14	ENST00000304430.10	1227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.4165807559224	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTTTTGTTATTTTTCTT	-122921966	True	NA	65	True	TATAAA	-20	NA	122922597	122892576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922334
transcript_109578.known	chr4	-	1065	5	FSM	ENSG00000170917.14	ENST00000339154.6	1065	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	20.017180121086	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGCTCTAGGTAAGCTT	-122922762	True	NA	-2	True	AATAAA	-19	NA	122922968	122892643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_122893226_122897623_122897679_122912567_122912624_122917500_122917705_122922800
transcript_109597.nic	chr4	-	990	3	ISM	ENSG00000170917.14	ENST00000304430.10	1227	5	-444	19968	-73	-15019	5prime_fragment	FALSE	canonical	0	0	junction_2	49.5	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	-122923006	False	NA	NA	False	AATAAA	-24	NA	122923041	122912544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_122912624_122917500_122917705_122922334
transcript_1096.nic	chr1	-	2091	12	NIC	ENSG00000008130.15	novel	3235	12	NA	NA	-112	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	162.740070598831	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTAAAACTTCTGCAGGG	-1779991	False	NA	39	True	NA	NA	NA	1780181	1752470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1753061_1753566_1753650_1754050_1754209_1754283_1754384_1754543_1754699_1755373_1755477_1756257_1756344_1756502_1756609_1757180_1757311_1761951_1762036_1765227_1765447_1779904
transcript_109600.nic	chr4	-	859	3	ISM	ENSG00000170917.14	ENST00000339154.6	1065	5	-408	19901	-408	-15019	5prime_fragment	FALSE	canonical	3	75	junction_2	12	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTCCTAAATGTTTATT	-122923341	True	NA	NA	False	AATAAA	-24	NA	122923376	122912544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_122912624_122917500_122917705_122922800
transcript_109604.known	chr4	+	2492	15	FSM	ENSG00000145375.9	ENST00000422835.2	2492	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	8.88704629428331	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGAAAAAAAAAAAAAAAAAG	122919990	True	NA	NA	False	NA	NA	NA	122923100	123102293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123102183
transcript_109606.nic	chr4	+	1284	5	ISM	ENSG00000145375.9	ENST00000422835.2	2492	15	-29	167489	2	-585	5prime_fragment	FALSE	canonical	3	35	junction_1	5.80409338312195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGATTGCTCATCCTC	122919961	True	NA	NA	False	ATTAAA	-17	NA	122923071	122934804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096
transcript_109608.known	chr4	+	8116	16	FSM	ENSG00000145375.9	ENST00000274008.5	8116	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	9.62265844533389	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTCCACATAGAAATTC	122919967	True	NA	4	True	ATTAAA	-19	NA	122923077	123319433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_122923306_122927633_122927759_122929039_122929198_122933438_122933498_122934096_122934739_122935713_122935844_122936099_122936157_122938125_122938250_122947232_122947489_122979231_122979387_123028185_123028396_123056386_123056441_123057208_123057289_123090578_123090706_123256015_123256181_123313887
transcript_109609.known	chr4	+	849	2	FSM	ENSG00000164056.11	ENST00000515726.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	0	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCGCTCCTGGCCGGTGGCG	123392041	True	NA	NA	False	NA	NA	NA	123396810	123398337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123396933_123397610
transcript_109610.known	chr4	+	2348	2	FSM	ENSG00000164056.11	ENST00000339241.1	2348	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTCTCTCGATTTCTT	123392031	True	NA	5	True	AATATA	-11	NA	123396800	123403752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123396933_123401536
transcript_109611.known	chr4	+	2352	2	FSM	ENSG00000164056.11	ENST00000622283.1	2352	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGATTTCTTCATTTATT	123398224	True	NA	13	True	AATATA	-19	NA	123398385	123403760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123398514_123401536
transcript_109612.known	chr4	+	2504	2	FSM	ENSG00000164056.11	ENST00000394339.2	2504	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTCTCGATTTCTTCAT	123399458	False	NA	8	True	AATATA	-14	NA	123399509	123403755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123399795_123401536
transcript_109617.nnic	chr4	+	681	4	NNC	ENSG00000249464.7	novel	1450	4	NA	NA	4351	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGCATTCTTATATTT	123543786	True	NA	NA	False	AGTAAA	-17	NA	123543801	123664943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_123543895_123652786_123652903_123661752_123661834_123664552
transcript_109618.known	chr4	+	1137	4	FSM	ENSG00000249464.7	ENST00000662928.1	1137	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATTCTTATATTTTCTC	123553503	False	NA	NA	False	AGTAAA	-21	NA	123553518	123664947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_123554064_123652786_123652903_123661752_123661834_123664552
transcript_109620.known	chr4	-	8798	5	FSM	ENSG00000151458.12	ENST00000504087.6	8798	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	8.6421930087218	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCGTCACTTCTTCATGA	-124709617	True	NA	NA	False	AATAAA	-27	NA	124712732	124664047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_124667515_124668983_124672535_124678675_124678906_124709999_124711275_124712457
transcript_109621.nnic	chr4	-	1722	3	NNC	ENSG00000151458.12	novel	8798	5	NA	NA	-20	-40303	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTGGTGCTCTTCACT	-124709637	True	NA	NA	False	AATAAA	-29	NA	124712752	124707661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_124707814_124709999_124711275_124712457
transcript_109622.nic	chr4	-	1039	2	ISM	ENSG00000151458.12	ENST00000504087.6	8798	5	-20	46483	-20	-43172	5prime_fragment	FALSE	canonical	3	34	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATAAAAAACCCGTTA	-124709637	True	NA	NA	False	NA	NA	NA	124712752	124710530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_124711275_124712457
transcript_109625.nnic	chr4	-	606	4	Antisense	novelGene_ENSG00000283550.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATTGGGAGATCAAAGTA	-125566870	True	NA	NA	False	AATAAA	-21	NA	125567120	125507103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_125507259_125509992_125510065_125511890_125512009_125566859
transcript_109627.known	chr4	+	13208	16	FSM	ENSG00000164066.13	ENST00000335251.11	13208	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	13.3908758322806	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTGCCTTTTTCATG	127630920	True	NA	11	True	AATAAA	-24	NA	127632956	127726737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127633181_127643520_127644057_127656635_127656722_127663380_127663585_127669035_127669155_127674123_127674214_127684408_127684487_127687677_127687868_127700009_127700064_127704227_127704291_127705590_127705813_127706486_127706970_127708570_127708669_127710912_127711103_127713935_127714094_127716324
transcript_109638.known	chr4	+	737	2	FSM	ENSG00000164066.13	ENST00000504491.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGTCAGGTACTCATTG	127623260	True	NA	NA	False	NA	NA	NA	127623270	127644036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127623492_127643520
transcript_109639.nic	chr4	+	427	2	ISM	ENSG00000164066.13	ENST00000503952.5	3006	17	-41	72788	-32	-345	5prime_fragment	FALSE	canonical	3	41	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAACCCAAACTCAAGC	127630888	True	NA	-25	True	AAGAAA	-8	NA	127632924	127643691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127633181_127643520
transcript_109640.known	chr4	+	10608	19	FSM	ENSG00000164070.12	ENST00000296464.9	10608	19	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_12	6.21725992601679	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCACACCTGAGGTTTA	127781883	True	NA	18	True	AATAAA	-29	NA	127782321	127840733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127782658_127794076_127794135_127795767_127795909_127798586_127798710_127801137_127801238_127801784_127801919_127803628_127803874_127804010_127804088_127805072_127805225_127805686_127805794_127807995_127808130_127811436_127811637_127818324_127818421_127820427_127820566_127822768_127822895_127823516_127823625_127827304_127827425_127830637_127830800_127832682
transcript_109641.known	chr4	-	481	1	FSM	ENSG00000244021.4	ENST00000491435.2	481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGTGTTAAAAAAAAAAAAA	-127813182	False	NA	NA	False	NA	NA	NA	127813200	127812719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127812700_127813200
transcript_109647.known	chr4	+	3838	16	FSM	ENSG00000142731.11	ENST00000270861.10	3838	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	25.9909385919187	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGGTATATTTTAATGAA	127877200	True	NA	NA	False	AATACA	-23	NA	127880892	127899224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707_127886729_127887395_127887497_127889865_127890237_127891091_127891197_127891578_127891682_127892364_127892515_127893284_127893419_127893512_127893605_127893733_127893882_127894952_127895094_127896800_127896908_127898438
transcript_109653.nic	chr4	+	1898	5	ISM	ENSG00000142731.11	ENST00000507249.5	3195	16	-129	11867	-93	3417	5prime_fragment	FALSE	canonical	3	185	junction_3	7.56224173112709	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAGCCTCATTTTTTAA	NA	False	NA	NA	False	TATAAA	-20	NA	127880799	127886933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127881165_127881830_127881927_127883261_127883358_127883438_127883554_127885707
transcript_109656.known	chr4	+	538	4	FSM	ENSG00000142731.11	ENST00000511942.5	538	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	86.3802961071306	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGAATAGAGTGAAACC	127877200	True	NA	NA	False	AATGAA	-8	NA	127880892	127883516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127881165_127881830_127881927_127883265_127883358_127883438
transcript_109657.known	chr4	+	5753	13	FSM	ENSG00000164074.16	ENST00000645843.2	5753	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	20.7583651143876	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATCTCAATGTTGCTC	127963959	True	NA	NA	False	AATAAA	-16	NA	127965405	128039953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509_128030673_128035761
transcript_109666.known	chr4	-	4422	12	FSM	ENSG00000164073.11	ENST00000641686.2	4422	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	14.9853923362411	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAGCTTTAAAACTTTA	-127963113	True	NA	-11	True	AATAAA	-22	NA	127965173	127917804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109667.known	chr4	-	4374	12	FSM	ENSG00000164073.11	ENST00000641178.1	4374	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	22.7607026863597	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAGACTTATTTGTAA	NA	False	NA	-95	True	AATAGA	-42	NA	127966034	127917888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965896
transcript_109673.known	chr4	+	2177	11	FSM	ENSG00000164074.16	ENST00000398965.5	2177	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	24.6989878335125	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATACAAAAAAAAAAAA	127965219	False	NA	NA	False	NA	NA	NA	127965305	128031290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128028474_128028854_128030509
transcript_109674.known	chr4	+	1493	11	FSM	ENSG00000164074.16	ENST00000611882.1	1493	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	23.8539304937362	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCACAGAGTTACTTTT	127965479	False	NA	NA	False	NA	NA	NA	127965505	128030805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_127965607_127982938_127983048_127984338_127984424_128008919_128008999_128009106_128009192_128011672_128011701_128017362_128017502_128020079_128020170_128021136_128021239_128028474_128028854_128030509
transcript_109676.known	chr4	-	4448	11	FSM	ENSG00000164073.11	ENST00000641186.1	4448	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	25.0081986556409	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATGTACCTTAAGCTTT	-127965205	False	NA	-20	True	AATAAA	-13	NA	127965322	127917813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109677.known	chr4	-	1823	11	FSM	ENSG00000164073.11	ENST00000641742.1	1823	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	21.4895323355349	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAAGAATTAGCCATAG	-127963119	True	NA	53	True	ATTAAA	-30	NA	127965179	127920264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109678.known	chr4	-	4261	11	FSM	ENSG00000164073.11	ENST00000641025.1	4261	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	22.2488201934395	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGAATGTT	-127963111	True	NA	-66	True	NA	NA	NA	127965171	127917859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109682.known	chr4	-	2303	11	FSM	ENSG00000164073.11	ENST00000642042.1	2303	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	11.9649488089168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGGAAACTACTTGCT	-127963120	True	NA	-13	True	AATAAA	-12	NA	127965180	127920617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109684.known	chr4	-	4132	10	FSM	ENSG00000164073.11	ENST00000642034.1	4132	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	30.3563201465445	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTTTACATTGTGAATG	-127963098	True	NA	-68	True	NA	NA	NA	127965158	127917861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109685.known	chr4	-	4860	10	FSM	ENSG00000164073.11	ENST00000641482.1	4860	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	21.2399576852012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGAGAAGAAATTCT	-127963088	True	NA	NA	False	GATAAA	-35	NA	127965148	127917924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109688.known	chr4	-	4050	9	FSM	ENSG00000164073.11	ENST00000641509.1	4050	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	27.3058487324602	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTACATTGTGAATGTT	-127963111	True	NA	-66	True	NA	NA	NA	127965171	127917859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127920837_127921523_127921772_127921859_127921964_127930682_127930818_127932984_127933094_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109689.known	chr4	-	2479	9	FSM	ENSG00000164073.11	ENST00000641590.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	31.2919718138694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACACCTACTTTTTATTTA	-127963085	True	NA	NA	False	TTTAAA	-32	NA	127965145	127920188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127921772_127930682_127930818_127932984_127933094_127938782_127938839_127939852_127939998_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109699.known	chr4	-	948	8	FSM	ENSG00000164073.11	ENST00000641743.1	948	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	8.04325043443386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATATAGATGTTATTGA	-127963088	True	NA	NA	False	NA	NA	NA	127965148	127932914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127933094_127938782_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109702.nnic	chr4	+	1746	7	NNC	ENSG00000164074.16	novel	2177	11	NA	NA	3	1580	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	26.9361384677826	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAAGGAAATAGGAT	127965222	False	NA	NA	False	AAAAAG	-27	NA	127965308	128010537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_127965607_127982938_127983048_127984338_127984424_127989720_127989822_128008919_128008999_128009106_128009193_128009549
transcript_109707.known	chr4	-	1422	7	FSM	ENSG00000164073.11	ENST00000641243.1	1422	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	23.4426012966897	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCATTTGACAACTTGGT	-127963111	True	NA	NA	False	ATTAAA	-21	NA	127965171	127932318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109708.known	chr4	-	1327	7	FSM	ENSG00000164073.11	ENST00000641134.1	1327	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	32.2524762184584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTGTATGTATATACATG	-127965835	True	NA	NA	False	NA	NA	NA	127965952	127932369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127933094_127938782_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965896
transcript_109709.nic	chr4	-	932	7	ISM	ENSG00000164073.11	ENST00000641743.1	948	8	-107	5812	-4	353	5prime_fragment	FALSE	canonical	3	71	junction_2	8.51958527942137	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTTGTTTGGTATTTA	-127965138	False	NA	1	True	AATATA	-25	NA	127965255	127938726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_127938839_127939852_127939998_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109715.nic	chr4	-	784	6	ISM	ENSG00000164073.11	ENST00000641243.1	1422	7	-84	6411	-4	350	5prime_fragment	FALSE	canonical	3	24	junction_1	25.1761792176653	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTTGTTTGGTAT	-127965138	False	NA	-2	True	AATATA	-22	NA	127965255	127938729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_127938839_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109717.nic	chr4	-	1399	6	NIC	ENSG00000164073.11	novel	5109	12	NA	NA	-4	202	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	33.7484814473185	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTTTATAGGTACAATAT	-127965138	False	NA	NA	False	AATAAA	-22	NA	127965255	127938877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_127939602_127942044_127942159_127943751_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109718.nic	chr4	+	765	4	ISM	ENSG00000164074.16	ENST00000513371.1	569	6	-229	24428	-61	-24428	5prime_fragment	FALSE	canonical	2	5	junction_1	28.2960539062723	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	NA	False	NA	6	True	AATAAA	-14	NA	127965244	127984529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127965607_127965953_127966057_127982938_127983048_127984338
transcript_109719.known	chr4	-	886	4	FSM	ENSG00000164073.11	ENST00000641140.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	7.58653778449403	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAAACAAAAATAGATCC	-127963159	True	NA	NA	False	NA	NA	NA	127965219	127943390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_127943993_127949803_127949848_127957500_127957593_127965071
transcript_109721.nic	chr4	+	626	3	ISM	ENSG00000164074.16	ENST00000611882.1	1493	11	-225	46276	-25	-24428	5prime_fragment	FALSE	canonical	3	66	junction_2	8.5	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	127965168	True	NA	6	True	AATAAA	-14	NA	127965280	127984529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_127965607_127982938_127983048_127984338
transcript_109722.nnic	chr4	+	453	3	NNC	ENSG00000164074.16	novel	2177	11	NA	NA	-28	-24428	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	32.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCCGTATGGATTTTTCAT	127965165	True	NA	6	True	AATAAA	-14	NA	127965277	127984529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_127965431_127982938_127983048_127984338
transcript_109725.known	chr4	+	3105	12	FSM	ENSG00000138709.19	ENST00000512292.5	3105	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	43.1405544472545	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATGTGCTGATCTTATTC	128058985	True	NA	18	True	ATTAAA	-22	NA	128061285	128123869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825_128122189_128122481
transcript_109730.nic	chr4	+	1920	11	ISM	ENSG00000138709.19	ENST00000512292.5	3105	12	-39	1517	-39	0	5prime_fragment	FALSE	canonical	3	45	junction_9	37.1840019363166	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATCGTTTTATTTTATG	128061208	False	NA	NA	False	AATATA	-19	NA	128061246	128122352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128114569_128114743_128121825
transcript_109733.known	chr4	+	2151	10	FSM	ENSG00000138709.19	ENST00000394288.7	2151	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	19.9654021735255	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059034	True	NA	12	True	AATAAA	-19	NA	128061334	128108901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_109737.known	chr4	+	2707	9	FSM	ENSG00000138709.19	ENST00000432347.6	2707	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	21.1601039694988	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128059047	True	NA	12	True	AATAAA	-19	NA	128061347	128108901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128082164_128082306_128091000_128091145_128091346_128091513_128098185_128098331_128107138
transcript_109742.nic	chr4	+	2098	9	NIC	ENSG00000138709.19	novel	2151	10	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_4	44.2033652565051	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGTACATTTTTGTG	128061208	False	NA	12	True	AATAAA	-19	NA	128061246	128108901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787_128077963_128091000_128091145_128091346_128091513_128098185_128098331_128107138_128107314_128107882
transcript_109749.nic	chr4	+	328	4	ISM	ENSG00000138709.19	ENST00000394288.7	2151	10	-88	31060	-39	-31013	5prime_fragment	FALSE	canonical	3	81	junction_1	17.326921891156	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGGTTGAAAAGAG	128061208	False	NA	NA	False	AATAAA	-25	NA	128061246	128077841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_128061402_128074459_128074519_128074933_128074994_128077787
transcript_109752.known	chr4	-	3785	3	FSM	ENSG00000164040.18	ENST00000520121.6	3785	3	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	37	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTGAATGTTTCTCA	NA	False	NA	-4	True	AATAAA	-26	NA	128288829	128269241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128271414_128272361_128272518_128287372
transcript_109753.known	chr4	-	1144	3	FSM	ENSG00000164040.18	ENST00000512483.5	1144	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	290	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTAATTGTGCCTTA	-128287819	True	NA	NA	False	NA	NA	NA	128288203	128270611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128271414_128272361_128272518_128288017
transcript_109758.nnic	chr4	-	724	2	NNC	ENSG00000164040.18	novel	2858	2	NA	NA	-5347	472	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	526	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTTGAGTTGGACTTTA	-128278024	False	NA	-19	True	AATAAA	-21	NA	128278408	128270139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_128270850_128278394
transcript_109759.known	chr4	-	2987	21	FSM	ENSG00000151466.12	ENST00000281142.10	2987	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	12.8631255921724	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGTCATGTATTTTA	-129091021	True	NA	2	True	AATAAA	-18	NA	129093539	128883992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_128884540_128888678_128888775_128891058_128891138_128936654_128936852_128942995_128943189_128946006_128946153_128948495_128948571_128952768_128952841_128957025_128957125_128959599_128959778_128965226_128965319_128970377_128970469_128992166_128992238_128997873_128997940_128999671_128999795_129003740_129003877_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_109763.nnic	chr4	-	1012	7	NNC	ENSG00000151466.12	novel	2096	6	NA	NA	-5	-1178	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	30.5650490302604	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGATCTGTATTCTGAA	-129091050	True	NA	-18	True	ATTAAA	-14	NA	129093568	129037772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069_129093149_129093245
transcript_109764.known	chr4	-	2096	6	FSM	ENSG00000151466.12	ENST00000506368.5	2096	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	23.0008695487801	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTAGTTTTTCTCATTT	-129090859	False	NA	NA	False	AATAAA	-18	NA	129093377	129036594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_129038127_129039040_129039097_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_109767.known	chr4	-	1696	5	FSM	ENSG00000151466.12	ENST00000511426.5	1696	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	23.951774464536	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGTCAGAATCTGATTG	-129091027	True	NA	NA	False	AATAAA	-25	NA	129093545	129039192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093069
transcript_109768.known	chr4	-	1604	5	FSM	ENSG00000151466.12	ENST00000503401.1	1604	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	32.7900518450337	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTTATAAATAAAGAATAAG	-129091045	True	NA	NA	False	AGTAAA	-23	NA	129093563	129039229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_129040213_129043394_129043468_129043992_129044052_129082305_129082374_129093142
transcript_109774.known	chr4	+	5644	11	FSM	ENSG00000077684.16	ENST00000610919.4	5644	11	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	154.941408280679	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGTCTTTTGAAAT	128808281	True	NA	13	True	AATAAA	-22	NA	128811269	128875224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703_128862226_128867855_128867974_128871354
transcript_109778.known	chr4	+	4012	9	FSM	ENSG00000077684.16	ENST00000413543.6	4012	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	209.022090638765	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTGTTTTCTCAAGTAAG	128808337	True	NA	11	True	AATAAA	-19	NA	128811325	128864630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128811404_128831732_128831811_128842952_128843039_128846374_128846533_128848979_128849168_128852056_128852269_128855629_128855798_128857337_128857455_128861703
transcript_109780.known	chr4	+	564	5	FSM	ENSG00000077684.16	ENST00000510308.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	213.433098417279	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGACATGGATGCTGCATG	128808299	True	NA	NA	False	NA	NA	NA	128811287	128849112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_128811397_128831732_128831811_128842952_128843039_128846374_128846533_128848979
transcript_109781.known	chr4	+	6170	6	FSM	ENSG00000151470.13	ENST00000281146.9	6170	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	17.4424768883321	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTTGAATTAGTTTTT	129093306	False	NA	NA	False	AATAAA	-22	NA	129093316	129116640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_129094029_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_109783.known	chr4	+	5513	6	FSM	ENSG00000151470.13	ENST00000425929.6	5513	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	10.3266645147405	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTATGTTTTTGAATTAGTT	129095590	True	NA	NA	False	AATAAA	-19	NA	129096151	129116637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109306_129109359_129109472_129109673_129111685
transcript_109789.known	chr4	+	396	4	FSM	ENSG00000151470.13	ENST00000508673.5	396	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	24.6080384337223	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGGAGTTATTTTCCA	129095567	True	NA	NA	False	NA	NA	NA	129096128	129109536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_129096210_129102601_129102792_129106586_129106648_129109472
transcript_109794.nnic	chr4	-	976	2	Antisense	novelGene_ENSG00000249618.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGATTACGATACATT	-129854214	True	NA	NA	False	NA	NA	NA	129854349	129851642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_129852156_129853886
transcript_109800.nnic	chr4	+	660	2	Antisense	novelGene_ENSG00000251598.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	111	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACTAAATATCTTTCTTT	132122993	True	NA	NA	False	ATTAAA	-19	NA	132123742	132127580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_132124000_132127177
transcript_109807.nnic	chr4	-	1292	11	NNC	ENSG00000250241.7	novel	1205	8	NA	NA	2	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.61782876207526	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAACTAAATTTTGC	-133148667	True	NA	NA	False	AAAAAG	-10	NA	133149145	133109839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_133110100_133110785_133110911_133115495_133115647_133116368_133116512_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_109817.known	chr4	-	3339	9	FSM	ENSG00000250241.7	ENST00000671428.1	3339	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.80722113075735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATACACACTAATATGT	-133148646	True	NA	NA	False	NA	NA	NA	133149124	133093348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140657_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_109819.nnic	chr4	-	998	9	NNC	ENSG00000250241.7	novel	1205	8	NA	NA	2	428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.35607132140714	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGAACTAAATTTTGC	-133148667	True	NA	NA	False	AAAAAG	-10	NA	133149145	133109839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_133110100_133110785_133110911_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_109821.known	chr4	-	2817	8	FSM	ENSG00000250241.7	ENST00000505289.6	2817	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.06689938599091	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTATATTATTATAAATG	-133148636	True	NA	NA	False	TATAAA	-24	NA	133149114	133093789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_109824.known	chr4	-	8044	9	FSM	ENSG00000250241.7	ENST00000667505.1	8044	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.57071421427143	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTATTTCTATTTTCTGG	-133148669	True	NA	NA	False	TTTAAA	-13	NA	133149147	133088669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133095951_133096735_133096884_133138959_133139034_133139825_133139882_133140585_133140660_133142710_133142783_133145603_133145746_133147198_133147277_133149028
transcript_109826.nnic	chr4	+	1182	5	NNC	ENSG00000138650.9	novel	8510	5	NA	NA	-4	-3929	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	16.3458710382775	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTCCTAAAATGTG	133148446	True	NA	NA	False	AATAAA	-24	NA	133149289	133190771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_133149369_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_109827.known	chr4	+	8510	5	FSM	ENSG00000138650.9	ENST00000264360.7	8510	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.89711431702997	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGCTGATTTAGTAAT	133148450	True	NA	97	True	AATAAA	-36	NA	133149293	133194700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_133152772_133154306_133154366_133154916_133155024_133162976_133163283_133190140
transcript_109830.known	chr4	-	1460	2	FSM	ENSG00000286467.1	ENST00000669848.1	1460	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAATGATCTTTGTGTAA	-133263091	True	NA	NA	False	TATAAA	-12	NA	133263115	133261021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_133261995_133262628
transcript_109832.known	chr4	-	4985	2	FSM	ENSG00000254535.4	ENST00000421491.4	4985	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTTTGAAAATGATTTT	-134201281	True	NA	NA	False	AATAAA	-23	NA	134201789	134196332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_134201246_134201717
transcript_109835.known	chr4	+	415	1	FSM	ENSG00000213448.3	ENST00000463671.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATGGTGAAAACACC	NA	False	NA	NA	False	NA	NA	NA	137448086	137448501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_137448100_137448500
transcript_109836.known	chr4	-	1483	5	FSM	ENSG00000189184.12	ENST00000510305.5	1483	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	114.762798850499	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACATTTGTACCTTA	-137529477	True	NA	30	True	NA	NA	NA	137532494	137520837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_137521697_137528477_137528642_137528731_137528821_137529601_137529733_137532254
transcript_109838.known	chr4	-	5102	4	FSM	ENSG00000189184.12	ENST00000412923.6	5102	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	48.3482735529983	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-137529442	True	NA	-22	True	AATAAA	-18	NA	137532459	137519702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137529601
transcript_109839.known	chr4	-	1331	4	FSM	ENSG00000189184.12	ENST00000511115.5	1331	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	116.511325152918	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATACATTTGTACCTTA	-137529459	True	NA	30	True	NA	NA	NA	137532476	137520837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_137521697_137528477_137528642_137528731_137528818_137532254
transcript_109842.nnic	chr4	-	2156	2	NNC	ENSG00000189184.12	novel	4625	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGGAACTGTCTATAAG	-137529510	True	NA	-22	True	AATAAA	-18	NA	137532527	137519702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_137521586_137532254
transcript_109843.nnic	chr4	-	1042	2	NNC	ENSG00000189184.12	novel	819	4	NA	NA	-89	-35	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAATGCAAGTGTGATTAT	-137532534	False	NA	-5	True	ATTAAA	-20	NA	137532583	137520872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_137521586_137532254
transcript_109845.known	chr4	-	9645	12	FSM	ENSG00000151012.13	ENST00000280612.9	9645	12	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_7	5.03377025451168	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGTCGTCATGTTTTGC	-138240046	True	NA	NA	False	AATAAA	-20	NA	138242349	138164096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_138172018_138179216_138179395_138180640_138180791_138182296_138182394_138183201_138183306_138185120_138185245_138214584_138214630_138219265_138219366_138223198_138223325_138232266_138232383_138236324_138236452_138241792
transcript_109850.nic	chr4	-	1016	6	ISM	ENSG00000109381.21	ENST00000394235.6	4012	10	-24	14647	-24	-5857	5prime_fragment	FALSE	canonical	3	83	junction_2	8.3282651254628	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	-139175123	True	NA	NA	False	AAAAAG	-7	NA	139177242	139071866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_139072004_139073453_139073568_139125163_139125330_139137629_139137868_139139412_139139498_139176966
transcript_109854.nic	chr4	-	552	3	ISM	ENSG00000109381.21	ENST00000514606.1	2219	4	-95	5857	63	-5857	5prime_fragment	FALSE	canonical	3	56	junction_2	18	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGAGTATATTTATACAT	-139084362	True	NA	NA	False	AAAAAG	-7	NA	139084433	139071866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_139072004_139073453_139073568_139084132
transcript_109855.known	chr4	-	3036	7	FSM	ENSG00000109381.21	ENST00000358635.7	3036	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	41.1315639813946	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTCTCTGGTGATATT	-139084478	False	NA	-10	True	AATATA	-21	NA	139084496	139057854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139059608_139060323_139060675_139061864_139062058_139067683_139067771_139071865_139072040_139073453_139073568_139084132
transcript_109856.known	chr4	-	1434	3	FSM	ENSG00000109381.21	ENST00000511006.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTGTGAACCCGAGAGGC	-139175099	True	NA	NA	False	NA	NA	NA	139177218	139136770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139137868_139139412_139139498_139176966
transcript_109858.known	chr4	-	2219	4	FSM	ENSG00000109381.21	ENST00000514606.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	28.1780056072107	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGACATTGAACACATTCA	-139083761	True	NA	NA	False	AAGAAA	-44	NA	139084338	139066009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139067771_139071865_139072004_139073453_139073568_139084132
transcript_109859.known	chr4	+	6174	20	FSM	ENSG00000164134.13	ENST00000296543.10	6174	20	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_8	41.1940882723147	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAATTGCACTTTTAC	139295268	True	NA	8	True	AATAAA	-17	NA	139301504	139391384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384831_139384979_139386132_139386231_139387883
transcript_109861.known	chr4	+	6072	20	FSM	ENSG00000164134.13	ENST00000398947.1	6072	20	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	81.1238921192529	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTTTGGAAAAGATTAC	139295351	True	NA	-8	True	AATAAA	-1	NA	139301587	139391368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210_139370405_139376364_139376474_139378755_139378855_139384834_139384979_139386132_139386231_139387883
transcript_109864.nic	chr4	+	2187	15	ISM	ENSG00000164134.13	ENST00000296543.10	6174	20	-73	21086	-73	-9037	5prime_fragment	FALSE	canonical	3	334	junction_8	24.2176567396432	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAAAAAGAAAAGCAGC	139301373	True	NA	-10	True	AAGAAA	-27	NA	139301431	139370298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_139301832_139334173_139334259_139336847_139336953_139340911_139341070_139342825_139342961_139344185_139344340_139349461_139349582_139351190_139351287_139351504_139351612_139354025_139354099_139357385_139357556_139359742_139359896_139360499_139360629_139361723_139361938_139370210
transcript_109873.known	chr4	-	761	6	FSM	ENSG00000109390.13	ENST00000394228.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	2047.57772990429	2951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139302535	False	NA	-11	True	AATAAA	-40	NA	139302551	139289916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139296331_139296368_139302415
transcript_109874.known	chr4	-	1257	6	FSM	ENSG00000109390.13	ENST00000544855.5	1257	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2046.3555311822	2878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139301194	False	NA	-11	True	AATAAA	-40	NA	139301210	139289916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139300601
transcript_109876.known	chr4	-	696	6	FSM	ENSG00000109390.13	ENST00000394223.2	696	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	2044.88640271287	2977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATATTGTGACAACTTGTA	-139301468	True	NA	-25	True	AATAAA	-36	NA	139302477	139289930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139297384_139297444_139302415
transcript_109886.known	chr4	-	809	5	FSM	ENSG00000109390.13	ENST00000505036.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	1811.10063221236	6824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATAAAGCATATTGTGACA	-139301188	False	NA	-32	True	AATAAA	-29	NA	139301204	139289937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300963
transcript_109888.known	chr4	-	682	5	FSM	ENSG00000109390.13	ENST00000503453.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1813.26161584588	5934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-139301404	False	NA	-47	True	AATAAA	-14	NA	139301420	139289952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139301291
transcript_109890.known	chr4	-	664	5	FSM	ENSG00000109390.13	ENST00000394225.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_4	1766.58659213184	6676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTGTATTCTTCAGATA	-139301517	True	NA	-47	True	AATAAA	-14	NA	139302526	139289952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139302415
transcript_109894.known	chr4	-	1224	4	FSM	ENSG00000137463.5	ENST00000398955.2	1224	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	6.34209919681348	276	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTCTACTTTTTTC	-139279890	True	NA	-11	True	AATAAA	-13	NA	139280225	139266164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139267042_139268671_139268766_139275288_139275393_139280076
transcript_10990.nnic	chr1	+	580	4	NIC	ENSG00000160688.19	novel	1730	8	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_2	221.699997494111	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974939	True	NA	22	True	AATAAA	-18	NA	154983326	154993111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_154983398_154983841_154984067_154992712_154992787_154992901
transcript_109908.known	chr4	-	1198	5	FSM	ENSG00000109390.13	ENST00000539002.5	1198	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	1780.41573445642	3071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTAGAAAATGTTAATTC	-139301194	False	NA	-11	True	AATAAA	-40	NA	139301210	139289916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139290093_139292529_139292610_139295042_139295147_139295731_139295961_139300601
transcript_109909.known	chr4	-	627	3	FSM	ENSG00000273247.6	ENST00000609359.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACATGGTACTGGCATTA	-139453716	True	NA	NA	False	NA	NA	NA	139454034	139413823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139414025_139415936_139416013_139453684
transcript_109912.known	chr4	+	4248	2	FSM	ENSG00000172007.7	ENST00000305626.6	4248	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACTGTCCTTGAAGAACT	139453501	True	NA	NA	False	NA	NA	NA	139454120	139476609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139454445_139472685
transcript_109915.nnic	chr4	-	1421	2	NIC	ENSG00000273247.6	novel	2510	3	NA	NA	4	852	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTGGGCAAAAGATCCAA	-139453712	True	NA	NA	False	NA	NA	NA	139454030	139412949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_139414025_139453684
transcript_109916.nnic	chr4	-	582	2	NIC	ENSG00000273247.6	novel	627	3	NA	NA	4	13	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGCACATAGACCACCAAT	-139453712	True	NA	NA	False	ATTAAA	-14	NA	139454030	139413788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_139414025_139453684
transcript_109917.nnic	chr4	-	1360	2	FSM	ENSG00000273247.6	ENST00000692258.1	1284	2	-76	0	-11	0	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTGTGGTGGCTCATG	-139453469	False	NA	NA	False	ATTAAA	-15	NA	139453787	139451674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139452932_139453684
transcript_109918.known	chr4	-	1602	8	FSM	ENSG00000145391.14	ENST00000506866.6	1602	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.24336382383205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAACCCAGGTTATTAG	-139555731	True	NA	NA	False	AATAAA	-15	NA	139556238	139495940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139496522_139517884_139518043_139520276_139520395_139523353_139523436_139529030_139529221_139533164_139533367_139546919_139547050_139556097
transcript_109921.known	chr4	-	1590	3	FSM	ENSG00000145391.14	ENST00000404104.7	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	1	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGTTGGAAATTAATG	NA	False	NA	NA	False	ATTAAA	-20	NA	139556769	139532578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139533367_139546919_139547050_139556097
transcript_109924.known	chr4	-	6844	5	FSM	ENSG00000196782.13	ENST00000509479.6	6844	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.9462219947249	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAAGTATAGTTTATTTT	-140153520	True	NA	2	True	AATAAA	-17	NA	140154184	139716752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139720324_139725750_139725836_139730415_139730668_139889356_139890968_140152859
transcript_109926.known	chr4	+	437	6	FSM	ENSG00000085871.9	ENST00000515067.1	437	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.5873551731922	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCTGGGAATTGCAAAC	139665848	False	NA	NA	False	NA	NA	NA	139666027	139704068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139666078_139678542_139678643_139687659_139687741_139695196_139695268_139703454_139703537_139704015
transcript_109931.known	chr4	+	740	5	FSM	ENSG00000085871.9	ENST00000265498.6	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	5.76085931090146	1311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGAAATGGCTTTGTA	139665175	True	NA	19	True	AATAAA	-21	NA	139665818	139704243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139666078_139678542_139678643_139695196_139695268_139703454_139703537_139704015
transcript_109933.known	chr4	+	634	4	FSM	ENSG00000085871.9	ENST00000506797.5	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	63.0396700498979	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGTCTTTATTCTGTTT	139665191	True	NA	0	True	AATAAA	-2	NA	139665834	139704224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_139666078_139678542_139678643_139703454_139703537_139704015
transcript_109937.known	chr4	-	411	1	FSM	ENSG00000178458.5	ENST00000230495.2	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	NA	False	NA	NA	False	NA	NA	NA	139698554	139698143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_139698100_139698600
transcript_109942.known	chr4	+	1838	3	FSM	ENSG00000153130.18	ENST00000506597.2	1838	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	292.5	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTTGTGTGTGTTT	140370321	True	NA	20	True	AATAAA	-8	NA	140373535	140382545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140373718_140379120_140379193_140380961
transcript_109944.known	chr4	-	453	3	FSM	ENSG00000196951.12	ENST00000608178.6	478	3	25	0	3	0	multi-exon	FALSE	canonical	3	29	junction_1	2.5	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCCGTACTTTCTCTG	-140373236	True	NA	NA	False	AATAAA	-14	NA	140373381	140360681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140360975_140369309_140369351_140373262
transcript_109946.known	chr4	-	2725	15	FSM	ENSG00000153132.13	ENST00000325617.10	2725	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	5.96246764420263	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCTATTTGACAGGTTAT	-140427382	True	NA	-1	True	AATAAA	-25	NA	140427648	140388452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_140389305_140390627_140390729_140392218_140392379_140392585_140392712_140393825_140394042_140395818_140395970_140396091_140396206_140398850_140399041_140400356_140400550_140401984_140402067_140405941_140406084_140409836_140409896_140410552_140410627_140412934_140413088_140427536
transcript_109952.known	chr4	+	4399	9	FSM	ENSG00000179387.10	ENST00000323570.8	4399	9	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_1	25.3660698571931	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTTCCTGTTGATA	140520857	True	NA	12	True	AATAAA	-18	NA	140524167	140553770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140524281_140525419_140525571_140527465_140527495_140535732_140535831_140537411_140537542_140540167_140540302_140542573_140542643_140543452_140543587_140550229
transcript_109960.known	chr4	+	751	3	FSM	ENSG00000179387.10	ENST00000511887.6	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	40	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGTTTCTTGCTCATA	140520857	True	NA	NA	False	AATAAA	-21	NA	140524167	140527952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_140524281_140525419_140525571_140527465
transcript_109969.known	chr4	+	1891	10	FSM	ENSG00000109445.11	ENST00000262990.9	1891	10	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_8	23.8394837958862	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTGACATTATATTTA	141216954	True	NA	19	True	AATAAA	-19	NA	141220894	141234697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_109972.nic	chr4	+	1602	10	NIC	ENSG00000109445.11	novel	1891	10	NA	NA	-9	-214	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	83.75286986054	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCATGATAAGTATGTT	141216937	True	NA	9	True	ATTAAA	-18	NA	141220877	141234483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_141221017_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_109985.known	chr4	+	1180	9	FSM	ENSG00000109445.11	ENST00000506302.1	1180	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	89.354630545932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTAGTTACACTTAATG	141216993	True	NA	NA	False	NA	NA	NA	141220933	141234096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141221109_141222365_141222492_141224486_141224507_141226766_141226847_141229570_141229698_141230165_141230271_141231438_141231486_141232524_141232643_141233714
transcript_109994.known	chr4	+	733	2	FSM	ENSG00000109445.11	ENST00000514826.5	733	2	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTACCTGTGCTAAGTG	141216946	True	NA	NA	False	NA	NA	NA	141220886	141222876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141221109_141222365
transcript_109997.known	chr4	+	573	6	FSM	ENSG00000109445.11	ENST00000503649.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	110.234295933707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTCATTAGACACAAGTA	141216989	True	NA	NA	False	NA	NA	NA	141220929	141229698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141221078_141222365_141222492_141224486_141224507_141224606_141224678_141226766_141226847_141229570
transcript_11.known	ERCC-00028	+	1120	1	FSM	ERCC-00028A	DQ459419	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00028_+_0_1100
transcript_110004.known	chr4	+	2015	8	FSM	ENSG00000164136.17	ENST00000320650.9	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.23027499638758	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTAATACTCACTGAG	141636470	True	NA	NA	False	TATAAA	-16	NA	141636582	141733987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141636749_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
transcript_110007.known	chr4	+	2472	8	FSM	ENSG00000164136.17	ENST00000296545.11	2472	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	6.87497680886627	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTAATACTCACTGAG	141636489	False	NA	NA	False	TATAAA	-16	NA	141636601	141733987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_141637225_141656185_141656308_141719365_141719477_141720468_141720567_141721923_141722009_141727939_141727985_141729846_141729985_141732737
transcript_11001.known	chr1	+	1803	3	FSM	ENSG00000160688.19	ENST00000368431.7	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	219.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	154974979	True	NA	18	True	AATAAA	-18	NA	154983366	154989012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983398_154983841_154984067_154987465
transcript_110017.known	chr4	-	759	2	FSM	ENSG00000250326.2	ENST00000507486.1	759	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGCACCCAAGACTATAAG	-143184741	True	NA	NA	False	NA	NA	NA	143184829	143177659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_143178097_143184507
transcript_110019.known	chr4	+	7684	24	FSM	ENSG00000153147.6	ENST00000283131.4	7684	24	0	0	0	0	multi-exon	FALSE	canonical	3	1216	junction_1	162.28607847422	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTCATGTGATTATTT	143504196	True	NA	9	True	ATTAAA	-16	NA	143513701	143557486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_143514102_143517354_143517430_143521428_143521596_143524366_143524468_143525450_143525552_143526280_143526461_143527867_143528024_143528582_143528715_143530457_143530527_143534854_143534965_143536451_143536679_143538589_143538712_143538785_143538939_143540362_143540496_143543508_143543658_143543852_143543973_143544736_143544848_143545469_143545584_143545924_143546048_143546775_143546909_143547384_143547504_143547927_143548141_143549996_143550105_143553118
transcript_110025.known	chr4	+	748	2	FSM	ENSG00000251600.8	ENST00000509369.1	748	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTTCACCTTCTGCCA	143559134	True	NA	NA	False	NA	NA	NA	143559471	143568160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_143560149_143568089
transcript_110026.known	chr4	+	1989	1	FSM	ENSG00000236296.8	ENST00000510805.1	1989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAACCTCAGCCTTCATGG	143559134	True	NA	NA	False	AATAAA	-10	NA	143559471	143561460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_143559500_143561500
transcript_110027.known	chr4	+	1770	4	FSM	ENSG00000164161.10	ENST00000434550.2	1770	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.4142135623731	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTCCTTGTACAATGTTT	144646155	True	NA	NA	False	CATAAA	-19	NA	144646171	144660273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_144646955_144652604_144652798_144658789_144658947_144659636
transcript_11003.nic	chr1	+	1356	3	ISM	ENSG00000160688.19	ENST00000315144.14	1730	8	-184	4099	-163	0	5prime_fragment	FALSE	canonical	3	474	junction_1	190	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCATCAGCACTGTGCTA	154983137	False	NA	18	True	AATAAA	-18	NA	154983174	154989012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_154983398_154983841_154984067_154988104
transcript_110033.known	chr4	-	963	7	FSM	ENSG00000164162.14	ENST00000510270.5	963	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	110.975472765632	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGATTTGAAGCCAATC	-145094351	True	NA	-30	True	AATAAA	-24	NA	145098189	144995160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_144999256_144999295_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_110036.known	chr4	-	689	7	FSM	ENSG00000164162.14	ENST00000513054.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	109.388705490507	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACCAGTAGAAGAGAGC	-145094342	True	NA	NA	False	ATTAAA	-5	NA	145098180	144995455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097494_145097563_145097687_145097761_145098119
transcript_11004.known	chr1	+	757	3	FSM	ENSG00000160688.19	ENST00000487371.1	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	413.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGCACTGGTCAACCTT	154975043	False	NA	NA	False	NA	NA	NA	154983430	154988433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983634_154983841_154984067_154988104
transcript_110049.known	chr4	-	928	6	FSM	ENSG00000164162.14	ENST00000451299.6	928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.210622193997	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094351	True	NA	-27	True	AATAAA	-27	NA	145098189	144995157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145097687_145097761_145098119
transcript_110065.known	chr4	-	867	3	FSM	ENSG00000164162.14	ENST00000502651.5	867	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	19	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGGAAGGTTATTCTTTT	-145094378	True	NA	NA	False	AATATA	-40	NA	145098216	144994924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145081659_145081751_145098119
transcript_110066.known	chr4	-	868	5	FSM	ENSG00000164162.14	ENST00000309439.9	868	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	79.8040569144201	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTTGAAGCCAATCATT	-145094375	True	NA	-27	True	AATAAA	-27	NA	145098213	144995157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145064571_145064693_145081659_145081751_145095984_145096112_145098130
transcript_110067.known	chr4	-	687	4	FSM	ENSG00000164162.14	ENST00000511466.5	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	106.867519231367	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGTAATAAAGCTCACAT	-145094353	True	NA	-65	True	AATAAA	-31	NA	145098191	144995195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_144995604_145081659_145081751_145095984_145096112_145098130
transcript_110068.known	chr4	+	3887	18	FSM	ENSG00000164163.11	ENST00000296577.9	3887	18	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_12	63.0622804144654	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTTTGACAAGGACAAT	145090653	True	NA	NA	False	AATAAA	-20	NA	145098310	145129524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931_145120154_145121173_145121234_145121332_145121392_145123020_145123132_145123214_145123358_145123477_145123601_145124989_145125102_145127525
transcript_110078.nic	chr4	+	1296	11	ISM	ENSG00000164163.11	ENST00000507193.5	2146	19	-91	7495	-68	2663	5prime_fragment	FALSE	canonical	3	691	junction_4	63.7872244262125	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGAGAATTTGAGCTAGCA	145090562	True	NA	NA	False	TATAAA	-23	NA	145098219	145120078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_145098420_145104385_145104516_145105604_145105691_145108014_145108113_145109131_145109250_145110102_145110241_145110374_145110445_145110967_145111065_145112238_145112329_145117292_145117415_145119931
transcript_11008.known	chr1	+	727	2	FSM	ENSG00000160688.19	ENST00000492620.1	727	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGCCGGACACTGCGC	154974950	True	NA	NA	False	NA	NA	NA	154983337	154988132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154983398_154987465
transcript_110081.known	chr4	-	1300	5	FSM	ENSG00000272727.2	ENST00000660722.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATATTTTTATGTACT	-145340444	True	NA	NA	False	AATAAA	-18	NA	145340486	145335262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_145336120_145336204_145336289_145337200_145337314_145338964_145339085_145340360
transcript_110082.known	chr4	-	1217	5	FSM	ENSG00000272727.2	ENST00000667468.1	1217	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATATTTTTATGTACT	-145340441	True	NA	NA	False	AATAAA	-18	NA	145340483	145335262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_145336120_145336204_145336289_145337200_145337314_145339044_145339085_145340360
transcript_11009.known	chr1	+	2189	7	FSM	ENSG00000160688.19	ENST00000292180.8	2189	7	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_2	144.019288831585	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGCTCTAGCTGTGTC	154974956	True	NA	22	True	AATAAA	-18	NA	154983343	154993111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_154984067_154988104_154988850_154989559_154989708_154990158_154990258_154990338_154990529_154992712_154992787_154992901
transcript_110090.known	chr4	-	1211	4	FSM	ENSG00000272727.2	ENST00000610239.2	1211	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTATATTTTTATGTACT	-145340439	True	NA	NA	False	AATAAA	-18	NA	145340481	145335262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_145336120_145337200_145337314_145338964_145339085_145340360
transcript_110092.nic	chr4	+	1819	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	28.7368327335417	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145481475	False	NA	NA	False	TTTAAA	-2	NA	145481652	145558079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_145481753_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_110093.nic	chr4	+	1905	7	NIC	ENSG00000170365.10	novel	3293	3	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	34.9829323464394	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145482504	False	NA	NA	False	TTTAAA	-2	NA	145482521	145558079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_145482708_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_110094.nic	chr4	+	1803	7	NIC	ENSG00000170365.10	novel	2085	7	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	33.579507639829	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145482719	False	NA	NA	False	TTTAAA	-2	NA	145482736	145558079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_145482821_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_110095.known	chr4	+	1658	7	FSM	ENSG00000170365.10	ENST00000394092.6	1658	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	34.6313923100607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAAACTATTGAGCCTT	145482642	True	NA	NA	False	NA	NA	NA	145482804	145557954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145482869_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_110096.known	chr4	+	2085	7	FSM	ENSG00000170365.10	ENST00000515385.1	2085	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	33.9296658135948	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACACAC	145482648	True	NA	NA	False	TTTAAA	-2	NA	145482810	145558079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145483177_145514437_145515014_145539803_145540062_145542581_145542699_145546702_145546925_145553783_145554041_145557790
transcript_11010.known	chr1	+	2874	22	FSM	ENSG00000143537.14	ENST00000359280.8	2874	22	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_19	22.5947237635275	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATCTTGGGAGCGTTCCC	155049048	True	NA	10	True	AATAAA	-4	NA	155051285	155062758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155051466_155052670_155052778_155053416_155053494_155053909_155053989_155054149_155054227_155054313_155054507_155055789_155055853_155055931_155056001_155056079_155056250_155056385_155056471_155056952_155057102_155057187_155057363_155057636_155057730_155057850_155058156_155058245_155058442_155058709_155058788_155059901_155059975_155060204_155060344_155060762_155060833_155061903_155061976_155062244_155062370_155062459
transcript_110102.known	chr4	+	5944	7	FSM	ENSG00000151611.17	ENST00000649156.2	5944	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	9.17272527054467	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGGGATCATGTAGT	145619076	True	NA	9	True	GATAAA	-18	NA	145619384	145660033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_110109.known	chr4	+	1687	4	FSM	ENSG00000151611.17	ENST00000506919.1	1687	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	10.4986771653491	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGGAGAGACAGTCTAT	145618973	False	NA	NA	False	AATAAA	-7	NA	145618984	145646622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145619408_145639074_145639579_145642362_145642486_145645985
transcript_110110.known	chr4	+	1615	6	FSM	ENSG00000151611.17	ENST00000647947.1	1615	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2904597972408	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTATAATAATTTTACAT	NA	False	NA	NA	False	AATAAA	-7	NA	145639079	145655444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_145639867_145642362_145642486_145645985_145646157_145651061_145651148_145653993_145654144_145655146
transcript_11016.known	chr1	+	525	2	FSM	ENSG00000143537.14	ENST00000464824.2	525	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGAGTTTGTCTGCTTC	NA	False	NA	27	True	AATAAA	-21	NA	155062160	155062775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155062370_155062459
transcript_110165.known	chr4	+	549	5	FSM	ENSG00000164167.12	ENST00000504181.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	610.238221926487	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAGAATTGGAAAGCCAA	146159597	True	NA	NA	False	AATAAA	-1	NA	146175747	146190187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_146175812_146182911_146183016_146187273_146187388_146189621_146189782_146190080
transcript_110177.known	chr4	+	454	4	FSM	ENSG00000164167.12	ENST00000649747.1	454	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	698.307636758725	3739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCACTGACATGTGAGT	146159577	True	NA	-38	True	NA	NA	NA	146175727	146189767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_146175812_146182905_146183016_146187273_146187388_146189621
transcript_110189.known	chr4	+	1352	4	FSM	ENSG00000164167.12	ENST00000502781.5	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	682.830058571596	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTTTATTGCATCCTT	146159578	True	NA	14	True	ATTAAA	-15	NA	146175728	146190046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_146176438_146182911_146183016_146187273_146187388_146189621
transcript_110190.known	chr4	-	1134	13	FSM	ENSG00000120519.16	ENST00000507030.5	1134	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.31507290636732	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGAGGTGGACTTTCTG	-146521372	False	NA	NA	False	NA	NA	NA	146521717	146256490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146256521_146256825_146256937_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_110192.known	chr4	-	3756	12	FSM	ENSG00000120519.16	ENST00000335472.12	3756	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.67929206269965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTGTGGCTTATTTT	-146521595	True	NA	NA	False	ATTAAA	-25	NA	146521940	146253980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146256521_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146442782_146442822_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_110193.known	chr4	-	3747	11	FSM	ENSG00000120519.16	ENST00000432059.6	3747	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.48087584241789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGCTTATTTTTAACCT	-146521619	True	NA	NA	False	ATTAAA	-31	NA	146521964	146253974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146256521_146258691_146258838_146283191_146283266_146292928_146292981_146293929_146294096_146305925_146306010_146325960_146325997_146503848_146503925_146509912_146510050_146517037_146517121_146521617
transcript_110198.known	chr4	-	1638	3	FSM	ENSG00000120519.16	ENST00000502607.1	1638	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACTTTTTGATTATTCA	-146521577	True	NA	NA	False	AATAAA	-17	NA	146521922	146513901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_146515152_146517037_146517121_146521617
transcript_110200.known	chr4	-	3461	12	FSM	ENSG00000164169.13	ENST00000322396.7	3461	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	17.1218288974452	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTGCGTGCTCTTTGTA	-147682331	True	NA	NA	False	AATAAA	-25	NA	147684163	147637784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_147638748_147638959_147639083_147642786_147642941_147653851_147654567_147657791_147657976_147660845_147661039_147668538_147668646_147670640_147670744_147672958_147673127_147673637_147673875_147680322_147680472_147683798
transcript_110202.known	chr4	+	4164	10	FSM	ENSG00000164168.8	ENST00000296582.8	4164	10	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_7	34.5857317329874	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAAGGGTTAGTATCC	147610896	True	NA	NA	False	AGTAAA	-22	NA	147617396	147636721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_147618080_147623833_147623965_147624061_147624099_147624803_147625010_147628360_147628436_147629598_147629693_147631392_147631506_147632902_147633003_147633764_147633937_147634168
transcript_11021.nic	chr1	+	1732	4	ISM	ENSG00000143590.14	ENST00000368408.4	1817	5	6106	0	-573	0	3prime_fragment	FALSE	canonical	3	128	junction_1	19.6185852927496	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	155084638	True	NA	NA	False	AATAAA	-17	NA	155084942	155087538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_155085405_155085876_155085943_155086127_155086206_155086412
transcript_110211.known	chr4	+	3270	23	FSM	ENSG00000071205.12	ENST00000336498.8	3270	23	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_21	9.75145676762755	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTGTCTGTCCTAAT	147731282	True	NA	7	True	AATAAA	-14	NA	147732087	148072776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552_147857655_147864845_147864957_147866711_147866817_147875020_147875151_147879231_147879339_147881837_147881933_147906637_147906720_147909731_147909778_147913073_147913140_147939824_147939900_147946616_147946705_147955315_147955375_147965023_147965130_147966679_147966840_148023262_148023414_148046891_148047052_148063147_148063301_148064415_148064508_148071992
transcript_110213.known	chr4	+	1559	5	FSM	ENSG00000071205.12	ENST00000510379.1	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	7.63216876123687	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTCTGTGTGTGTATGGT	147731257	True	NA	NA	False	TTTAAA	-19	NA	147732062	147858488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_147732456_147822726_147822823_147822895_147822958_147847150_147847223_147857552
transcript_110216.nic	chr4	-	1567	9	ISM	ENSG00000198589.14	ENST00000507224.5	8826	51	-10	599371	-3	-73554	5prime_fragment	FALSE	canonical	3	76	junction_8	14.4173289828595	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAATGAGACCTACTATT	-151009339	True	NA	NA	False	NA	NA	NA	151015287	150914093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_110219.known	chr4	-	10148	57	FSM	ENSG00000198589.14	ENST00000651943.2	10148	57	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_56	42.2625381407937	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGATTCAGTCCTAGTTT	-151009336	True	NA	-5	True	AATAAA	-32	NA	151015284	150264434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_150265813_150277852_150278005_150282449_150282647_150285932_150286035_150302624_150302793_150310228_150310385_150315560_150315624_150321190_150321369_150325808_150325899_150349991_150350160_150415437_150415591_150435588_150435709_150436723_150436865_150467672_150467786_150471623_150471740_150487731_150487835_150490917_150491036_150588047_150588185_150590712_150590860_150599006_150599132_150683550_150683718_150735257_150735367_150761782_150761848_150798080_150798143_150806270_150806405_150808319_150808399_150817123_150817258_150828179_150828622_150831816_150831977_150844099_150844208_150844657_150844780_150848817_150848999_150849421_150849576_150850723_150850903_150851884_150852944_150867670_150867864_150868181_150868306_150870524_150870607_150871344_150871454_150872662_150872756_150893051_150893150_150896393_150896457_150897738_150897819_150900048_150900218_150905837_150905991_150906296_150906406_150908333_150908468_150908659_150908858_150914194_150914342_150915607_150915728_150916400_150916528_150916616_150916739_150921197_150921294_150928515_150928617_150928833_150929066_151014426_151014862_151015201
transcript_110224.known	chr4	-	2140	2	FSM	ENSG00000198589.14	ENST00000514435.1	2140	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTTACTTTTGAAGAAT	-151009336	True	NA	NA	False	AAAAAG	-4	NA	151015284	151012804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151014862_151015201
transcript_110228.known	chr4	+	862	6	FSM	ENSG00000145425.10	ENST00000506126.5	862	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7631.28370328348	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCTATTTGTGATGGTTT	151081797	True	NA	-1	True	AATAAA	-2	NA	151099673	151104623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151100426_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_110229.known	chr4	+	985	6	FSM	ENSG00000145425.10	ENST00000514682.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	7629.28904682474	3816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081752	True	NA	13	True	AATAAA	-16	NA	151099628	151104637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099837_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_11023.known	chr1	+	776	4	FSM	ENSG00000143590.14	ENST00000498667.1	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	61.937244225282	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCCCCATTGCTCTCCTC	155085231	True	NA	NA	False	NA	NA	NA	155085521	155086923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155085643_155085876_155085943_155086127_155086206_155086412
transcript_110233.known	chr4	+	762	6	FSM	ENSG00000145425.10	ENST00000510993.1	762	6	0	0	0	0	multi-exon	FALSE	canonical	1	53	junction_1	7610.14048753372	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGAGACAGGTGCTAAAGTT	151099811	False	NA	-96	True	NA	NA	NA	151099872	151104528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099967_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_110238.known	chr4	+	576	4	FSM	ENSG00000145425.10	ENST00000509736.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	9067.32913021004	5416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081747	True	NA	13	True	AATAAA	-16	NA	151099623	151104637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151102870_151103080_151104176_151104287_151104471
transcript_110239.known	chr4	+	674	6	FSM	ENSG00000145425.10	ENST00000507327.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7631.28370328348	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTGAAGGCAGTAGTT	151081792	True	NA	NA	False	NA	NA	NA	151099668	151104490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099713_151100484_151100589_151100974_151101163_151102870_151103080_151104176_151104287_151104471
transcript_110240.known	chr4	+	671	6	FSM	ENSG00000145425.10	ENST00000515792.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7820.27014878642	4825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGCTTCTGAACATTC	151081794	True	NA	13	True	AATAAA	-16	NA	151099670	151104637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151100484_151100589_151100974_151101013_151102870_151103080_151104176_151104287_151104471
transcript_110241.known	chr4	+	572	5	FSM	ENSG00000145425.10	ENST00000515818.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8376.81211365636	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTTCGTTAGAAAAGTA	151081752	True	NA	NA	False	NA	NA	NA	151099628	151104238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151099715_151100484_151100589_151100974_151101086_151102870_151103080_151104176
transcript_110245.known	chr4	+	11517	14	FSM	ENSG00000164142.16	ENST00000435205.6	11517	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	8.60370086875719	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTAATTCATTTATTC	151404443	True	NA	40	True	ATTAAA	-17	NA	151409175	151670503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151409466_151454700_151454809_151482523_151482649_151566137_151566365_151577449_151578077_151586640_151586800_151588839_151588927_151629701_151629870_151638676_151638757_151646557_151646749_151649458_151650593_151656231_151656411_151656759_151656899_151662500
transcript_110247.known	chr4	-	2369	13	FSM	ENSG00000059691.12	ENST00000263985.11	2369	13	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_5	17.4872969768216	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTTTTCCAATAAATTTA	-151759133	True	NA	NA	False	AATAAA	-14	NA	151761007	151670503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151671303_151672761_151672897_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_11025.known	chr1	+	763	3	FSM	ENSG00000143590.14	ENST00000470294.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCACTGCCTGCTGCTTC	155085225	True	NA	NA	False	NA	NA	NA	155085515	155086982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155085643_155085876_155085943_155086412
transcript_110251.nnic	chr4	-	1920	12	NIC	ENSG00000059691.12	novel	2369	13	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	2	22	junction_1	42.6475077508097	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATTCTAAGAAAACTTTT	-151759164	True	NA	NA	False	AATAAA	-23	NA	151761038	151670848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_151671303_151679812_151679892_151688629_151688764_151701328_151701519_151703850_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_110257.known	chr4	-	1519	8	FSM	ENSG00000059691.12	ENST00000512306.5	1519	8	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	18.1737644500449	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGATAATTGAAACTTTTA	-151759111	True	NA	NA	False	AATAAA	-21	NA	151760985	151703341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151703896_151705184_151705270_151707987_151708102_151716008_151716132_151716875_151717075_151719424_151719539_151758771_151758923_151760806
transcript_11026.known	chr1	+	1254	4	FSM	ENSG00000243364.8	ENST00000368409.8	1254	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	6.18241233033047	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTGCCCTCAGGCCACT	155061029	True	NA	35	True	AATAAA	-29	NA	155063739	155069553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068852
transcript_110260.known	chr4	-	605	3	FSM	ENSG00000059691.12	ENST00000508611.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	91	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGTGTTTTACTGCC	-151759116	True	NA	NA	False	ATTAAA	-24	NA	151760990	151721945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_151722216_151758771_151758923_151760806
transcript_110261.nnic	chr4	-	1217	3	NNC	ENSG00000059691.12	novel	605	3	NA	NA	-31	-9	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGTAATGTTTGTGTGT	-151759164	True	NA	NA	False	ATTAAA	-15	NA	151761038	151721954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_151722789_151758771_151758923_151760806
transcript_110262.nic	chr4	-	1683	2	ISM	ENSG00000059691.12	ENST00000508611.1	605	3	-48	35526	-31	-35526	5prime_fragment	FALSE	canonical	3	187	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCTGGAAGCTGGTTGA	-151759164	True	NA	NA	False	NA	NA	NA	151761038	151757471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_151758923_151760806
transcript_110263.known	chr4	+	598	4	FSM	ENSG00000249184.2	ENST00000657686.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTGTGTCCAGTGTTTT	NA	False	NA	NA	False	CATAAA	-39	NA	151799455	151833097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_151799618_151799901_151800025_151828531_151828603_151832855
transcript_110264.nic	chr4	-	722	3	ISM	ENSG00000109670.16	ENST00000647183.1	1735	10	22621	0	-1749	0	3prime_fragment	FALSE	canonical	3	79	junction_1	4	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAGAAAAGA	-152326172	True	NA	-94	True	NA	NA	NA	152326185	152322818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_152323150_152324183_152324395_152326005
transcript_110265.known	chr4	+	3000	1	FSM	ENSG00000268471.6	ENST00000604157.1	3000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGTATATATGAGTCCCA	152535883	True	NA	38	True	AATAAA	-39	NA	152536263	152539263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152536300_152539300
transcript_110267.known	chr4	-	10534	7	FSM	ENSG00000170006.12	ENST00000304385.8	10534	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	1.34370962471642	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGAGCTTCTCTTCTTT	-152679888	True	NA	NA	False	ATTAAA	-28	NA	152679997	152618627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152628562_152640927_152640986_152643087_152643174_152644414_152644443_152652537_152652577_152652666_152652928_152679869
transcript_11027.known	chr1	+	1052	4	FSM	ENSG00000243364.8	ENST00000427683.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	39.0754256392543	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061050	True	NA	20	True	AATAAA	-14	NA	155063760	155069538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155069018
transcript_110276.known	chr4	-	2438	2	FSM	ENSG00000169989.3	ENST00000304337.3	2438	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTTAATTGCAAAA	-152779711	True	NA	NA	False	CATAAA	-18	NA	152779730	152769353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152771543_152779481
transcript_11028.known	chr1	+	1096	4	FSM	ENSG00000243364.8	ENST00000359751.8	1096	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	48.8898989794643	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCCCTCCCCAATCTAC	155061026	True	NA	20	True	AATAAA	-14	NA	155063736	155069538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155063937_155066729_155067017_155067371_155067441_155068998
transcript_110280.nnic	chr4	-	741	2	NNC	ENSG00000169989.3	novel	2438	2	NA	NA	-211	-5970	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTGAGTTTGTGGTAAT	-152779929	False	NA	-4	True	AATAAA	-16	NA	152779941	152775323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_152775605_152779481
transcript_110286.known	chr4	+	3424	9	FSM	ENSG00000164144.16	ENST00000451320.6	3424	9	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	77.3336925279014	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152779926	False	NA	NA	False	AATAAA	-21	NA	152779936	152912357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_110287.known	chr4	+	3542	9	FSM	ENSG00000164144.16	ENST00000353617.7	3542	9	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	62.1726426975724	575	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAGTTGGATATT	152773944	True	NA	NA	False	AATAAA	-21	NA	152779953	152912357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152870752_152870849_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_11029.known	chr1	+	1817	5	FSM	ENSG00000143590.14	ENST00000368408.4	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	25.4202183310844	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGTGTGTGATTTCAA	155077939	True	NA	NA	False	AATAAA	-17	NA	155078836	155087538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155079070_155085090_155085405_155085876_155085943_155086127_155086206_155086412
transcript_110292.known	chr4	+	1601	8	FSM	ENSG00000164144.16	ENST00000405727.6	1601	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	80.1623352953243	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGAAACTATTT	152773961	True	NA	NA	False	ATTAAA	-30	NA	152779970	152910664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780092_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_110293.known	chr4	+	1302	8	FSM	ENSG00000164144.16	ENST00000356064.3	1302	8	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	61.5901529367764	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGTTGTTATATTTCTA	152773975	True	NA	NA	False	AATAAA	-7	NA	152779984	152910244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780227_152829624_152829727_152863605_152863715_152872451_152872565_152880962_152881185_152882722_152882881_152888132_152888308_152910063
transcript_110299.nnic	chr4	+	599	5	NNC	ENSG00000164144.16	novel	514	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.866025403784439	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTAGTTCCTAAATAT	152773947	True	NA	NA	False	AATAAA	-17	NA	152779956	152810388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_152780092_152807203_152807249_152809189_152809239_152809672_152809734_152810079
transcript_11030.known	chr1	+	1552	5	FSM	ENSG00000169242.12	ENST00000368407.8	1552	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.35410196624968	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCTGCTAAGTGCGAGGC	155127476	True	NA	72	True	ATTAAA	-16	NA	155127875	155134899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155128070_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_110305.known	chr4	+	531	4	FSM	ENSG00000164144.16	ENST00000509413.1	531	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.10960933531265	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAGTAGTTCCTAAAT	152780079	False	NA	NA	False	AATAAA	-15	NA	152780108	152810386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780227_152807203_152807249_152809672_152809734_152810079
transcript_110307.known	chr4	+	514	4	FSM	ENSG00000164144.16	ENST00000510831.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.49443825784929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTAGTTCCTAAATAT	152773983	True	NA	NA	False	AATAAA	-17	NA	152779992	152810388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152780092_152807203_152807249_152809672_152809734_152810079
transcript_110309.nnic	chr4	+	643	3	NIC	ENSG00000164144.16	novel	531	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAGTAGTTCCTAAATAT	152773944	True	NA	NA	False	AATAAA	-17	NA	152779953	152810388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_152780227_152809672_152809734_152810079
transcript_11031.known	chr1	+	1083	5	FSM	ENSG00000169242.12	ENST00000474413.5	1083	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	15.9216833280907	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTCCTTTCCCACCATT	155129542	False	NA	NA	False	NA	NA	NA	155129561	155134307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155129879_155131338_155131635_155133502_155133569_155133729_155133781_155133954
transcript_110310.known	chr4	+	6597	12	FSM	ENSG00000137460.10	ENST00000511601.6	6597	12	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	5.42720420239974	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTTCATCTCAGCTT	152934523	True	NA	12	True	AATAAA	-17	NA	152936322	152979671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_152936410_152942927_152943556_152953498_152953561_152954216_152954320_152960564_152960651_152960743_152960845_152962813_152962885_152963022_152963131_152964904_152964976_152967979_152968098_152972376_152972542_152974674
transcript_110312.known	chr4	-	1048	2	FSM	ENSG00000287642.2	ENST00000685840.1	1344	2	120	176	116	0	multi-exon	FALSE	canonical	1	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAGACATGTATCCTTGG	-152936652	True	NA	2	True	AATAAA	-16	NA	152936761	152934515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_152935451_152936648
transcript_110315.known	chr4	+	6755	12	FSM	ENSG00000109654.16	ENST00000338700.10	6755	12	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	22.5681703744364	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCAGAGTGAATATTTAT	153202109	True	NA	8	True	AATAAA	-15	NA	153204442	153339317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153204561_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_110316.known	chr4	+	6871	12	FSM	ENSG00000109654.16	ENST00000675977.1	6871	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.7244168268805	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTGCAGAGTGAAT	153256493	True	NA	2	True	AATAAA	-9	NA	153257367	153339311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153257608_153270334_153270520_153275892_153276131_153292981_153293134_153294304_153294486_153295312_153296037_153315484_153315589_153315831_153316000_153322647_153322817_153324077_153324149_153328529_153328671_153334813
transcript_110319.known	chr4	+	679	3	FSM	ENSG00000109654.16	ENST00000632856.2	679	3	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	32.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153202109	True	NA	4	True	ATTAAA	-17	NA	153204442	153276268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153204561_153270334_153270520_153275892
transcript_110323.known	chr4	+	766	3	FSM	ENSG00000109654.16	ENST00000482578.3	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	55.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGACTACCTGCTCACT	153256528	False	NA	4	True	ATTAAA	-17	NA	153257402	153276268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153257608_153270334_153270520_153275892
transcript_110329.nnic	chr4	+	1290	8	NIC	ENSG00000121211.8	novel	638	6	NA	NA	262	110	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	139.777228007239	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	153337404	False	NA	-8	True	NA	NA	NA	153344949	153414975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_153345507_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_11033.known	chr1	+	1444	4	FSM	ENSG00000169242.12	ENST00000368406.2	1444	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	17.9071680247511	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTTTTCTGCCACTCCA	155127476	True	NA	30	True	AATAAA	-19	NA	155127875	155134857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155128070_155131338_155131635_155133729_155133781_155133954
transcript_110330.nnic	chr4	+	834	7	NIC	ENSG00000121211.8	novel	929	8	NA	NA	-54	110	combination_of_known_splicesites	TRUE	canonical	0	0	junction_6	154.844725092232	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATAAAGTGTAAAATGC	153344583	False	NA	-8	True	NA	NA	NA	153344594	153414975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153414750
transcript_110337.known	chr4	+	929	8	FSM	ENSG00000121211.8	ENST00000240488.8	929	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	21.6578213237111	2986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTAAGATCAAAACCAT	153337142	True	NA	31	True	AATAAA	-42	NA	153344687	153415118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970_153409016_153414750
transcript_110338.known	chr4	+	830	7	FSM	ENSG00000121211.8	ENST00000622785.4	830	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	147.197901555091	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGCAGATTTACAAATGAT	153337103	True	NA	8	True	AATAAA	-19	NA	153344648	153415095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153344741_153350063_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153408970_153409016_153414750
transcript_110339.known	chr4	+	638	6	FSM	ENSG00000121211.8	ENST00000504860.2	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	15.6843871413581	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTACATATTAAATCAT	153350033	False	NA	NA	False	AAGAAA	-33	NA	153350063	153409145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_153350130_153355653_153355712_153358473_153358623_153394261_153394337_153397218_153397334_153408970
transcript_110344.nnic	chr4	-	1017	7	NIC	ENSG00000145428.15	novel	1358	9	NA	NA	-10	0	combination_of_known_splicesites	TRUE	non_canonical	0	0	junction_1	14.3459247020035	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGTTTCTTAACTCATG	-153759958	False	NA	NA	False	AATAAA	-34	NA	153759980	153710159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_153710490_153712474_153712577_153715528_153715663_153720183_153720305_153723350_153723459_153751437_153751476_153759796
transcript_110350.known	chr4	-	1996	3	FSM	ENSG00000145423.5	ENST00000274063.5	1996	3	0	0	0	0	multi-exon	FALSE	canonical	3	2799	junction_2	37	11102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGTCTTCTGTCTTGT	-153736731	True	NA	-3	True	TATAAA	-22	NA	153789083	153780590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_153781756_153785863_153785945_153788333
transcript_110356.known	chr4	-	3317	15	FSM	ENSG00000171566.12	ENST00000499023.7	3317	15	0	0	0	0	multi-exon	TRUE	canonical	3	403	junction_9	45.6949177721558	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGCATTCCTGAGAGAT	-154541355	True	NA	-7	True	AATAAA	-16	NA	154550400	154535004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547010_154547065_154547710_154547854_154548828_154548936_154550299
transcript_110357.known	chr4	-	998	7	FSM	ENSG00000171566.12	ENST00000506627.5	998	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	190.157317912184	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCCCCTACCCCTGTGT	-154531891	False	NA	-12	True	AATAAA	-7	NA	154540936	154536520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538083_154539104_154539214_154539950_154540054_154540593_154540696_154540784
transcript_110358.known	chr4	-	1673	15	FSM	ENSG00000171566.12	ENST00000302078.9	1673	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	124.890584766288	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGGATATCCAGTCATTT	-154541352	True	NA	37	True	ATTAAA	-21	NA	154550397	154536618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154536745_154537285_154537480_154537968_154538109_154539104_154539214_154539950_154540054_154540593_154540696_154540784_154540935_154542186_154542280_154544444_154544547_154545835_154545924_154546122_154546214_154547037_154547065_154547710_154547854_154548828_154548936_154550299
transcript_110359.known	chr4	-	576	3	FSM	ENSG00000171566.12	ENST00000515520.1	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	7.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGAGAAGGTCACAGTAGA	-154541351	True	NA	NA	False	AATAAA	-36	NA	154550396	154547481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_154547854_154548828_154548936_154550299
transcript_110365.known	chr4	+	4901	3	FSM	ENSG00000121207.12	ENST00000336356.4	4901	3	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	209	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTCTTTAAATTTTAAA	154740435	True	NA	11	True	AATAAA	-18	NA	154743999	154753120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154744223_154744325_154744867_154748983
transcript_110371.known	chr4	+	1776	3	FSM	ENSG00000121207.12	ENST00000500890.6	1776	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAATAAATGGGACT	154626741	True	NA	NA	False	AAAAAG	-17	NA	154626944	154699900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154627150_154636328_154636397_154698397
transcript_110372.nic	chr4	+	1054	2	ISM	ENSG00000121207.12	ENST00000500890.6	1776	3	6	62717	6	-62717	5prime_fragment	FALSE	canonical	3	10	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCTGGGCATGGT	154626747	True	NA	NA	False	AATACA	-14	NA	154626950	154637183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_154627150_154636328
transcript_110373.known	chr4	+	5002	2	FSM	ENSG00000121207.12	ENST00000510733.1	5002	2	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	0	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTCTTTAAATTTTA	154740435	True	NA	9	True	AATAAA	-16	NA	154743999	154753118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154744867_154748983
transcript_11038.known	chr1	+	1298	6	FSM	ENSG00000169241.19	ENST00000368404.9	1298	6	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	77.8372661390417	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATGGTTCATTCTCTAC	155132158	True	NA	7	True	AATAAA	-19	NA	155135851	155138853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_110381.known	chr4	+	2315	6	FSM	ENSG00000151962.8	ENST00000514866.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	5.84465567848098	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAGCTAGTTTATACCA	154780966	True	NA	NA	False	AATGAA	-5	NA	154781212	154827385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154781437_154796741_154796904_154797810_154798279_154798781_154799565_154820362_154820423_154826767
transcript_110384.known	chr4	+	526	3	FSM	ENSG00000151962.8	ENST00000512640.1	526	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	16.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGTGTAAGCCTGGATAA	154781788	True	NA	NA	False	NA	NA	NA	154781816	154798058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154781933_154796741_154796904_154797810
transcript_110385.known	chr4	+	3626	5	FSM	ENSG00000151962.8	ENST00000510397.5	3626	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.2151240547029	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATGTGTTTTCTTTATAT	154781258	False	NA	2	True	ATTAAA	-15	NA	154781504	154828812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_154781673_154796741_154796904_154797810_154798279_154798781_154799565_154826767
transcript_110387.known	chr4	-	1615	3	FSM	ENSG00000250538.6	ENST00000511017.6	1615	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGATAAACTGAAATGAAAG	-155208461	True	NA	NA	False	AATAAA	-21	NA	155208478	155206528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155207816_155208024_155208177_155208302
transcript_110388.known	chr4	-	7328	14	FSM	ENSG00000164114.19	ENST00000311277.9	7328	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_10	12.7692307692308	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGATGCCTTTTTATGTTT	-155376938	True	NA	-24	True	AATAAA	-20	NA	155376965	155342657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_110389.known	chr4	-	2044	14	FSM	ENSG00000164114.19	ENST00000515654.5	2044	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	17.6346887843452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTAGCCATAGATTTAA	-155375975	True	NA	NA	False	NA	NA	NA	155376836	155347740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360344_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375915_155376770
transcript_11039.known	chr1	+	890	6	FSM	ENSG00000169241.19	ENST00000488609.5	890	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	153.899967511368	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGATTGGGGCCTAGGA	155132173	True	NA	NA	False	GATAAA	-28	NA	155135866	155138440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136397_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_110390.known	chr4	-	7113	14	FSM	ENSG00000164114.19	ENST00000650955.1	7113	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	18.0960618815615	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAATGTTATAAATAAAAC	-155375952	True	NA	-43	True	AATAAA	-1	NA	155376813	155342676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155347906_155352595_155352729_155352911_155353058_155353178_155353341_155355070_155355161_155355715_155355885_155357448_155357520_155360167_155360416_155362047_155362142_155368585_155368813_155373135_155373457_155374936_155375022_155375775_155375871_155376770
transcript_11040.known	chr1	+	886	5	FSM	ENSG00000169241.19	ENST00000484157.5	886	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	179.458908945753	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCAGTGGGTTGTGGG	155135299	True	NA	NA	False	NA	NA	NA	155135343	155138368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135681_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_110416.known	chr4	-	728	4	FSM	ENSG00000164114.19	ENST00000481250.1	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	11.6141675934562	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAACTTCAATTTTAC	-155375952	True	NA	NA	False	AAAAAG	-37	NA	155376813	155372995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_155373457_155374936_155375022_155375775_155375915_155376770
transcript_110420.known	chr4	+	3382	14	FSM	ENSG00000061918.14	ENST00000264424.13	3382	14	0	0	0	0	multi-exon	FALSE	canonical	2	51	junction_10	13.6581250066847	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGAATGTCATCAGCTTA	155758019	True	NA	NA	False	AATAAA	-31	NA	155759020	155807811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802341_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_110421.known	chr4	+	1951	14	FSM	ENSG00000061918.14	ENST00000503520.5	1951	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	25.0029584048385	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTCTCACTATCCGTT	155758088	True	NA	NA	False	NA	NA	NA	155759089	155806548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155789713_155789912_155793855_155794087_155795340_155795458_155796376_155796511_155799876_155800075_155802440_155802580_155803623_155803765_155804592_155804748_155805102_155805230_155806385
transcript_110422.nnic	chr4	+	619	5	NNC	ENSG00000061918.14	novel	3382	14	NA	NA	-1	-25916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	40.0335796550846	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTGTTTGTGCAAAA	155757993	True	NA	NA	False	AATAAA	-26	NA	155758994	155780632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_155759144_155759786_155759861_155774967_155775069_155777523_155777643_155780456
transcript_110425.known	chr4	+	1700	12	FSM	ENSG00000151790.9	ENST00000536354.3	1700	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.55345522642137	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTTGAAATATTGATT	NA	False	NA	NA	False	AATAAA	-22	NA	155903695	155920406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_155903794_155904017_155904124_155905066_155905158_155907721_155907793_155908886_155909015_155910024_155910212_155911496_155911605_155914322_155914435_155915854_155915913_155917394_155917475_155918148_155918240_155919836
transcript_110430.known	chr4	+	3033	10	FSM	ENSG00000109738.11	ENST00000264428.9	3033	10	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	3.17785547690558	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATGTAATTCAGTGCTAT	157076061	True	NA	NA	False	AATAAA	-21	NA	157076149	157172090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_157076298_157077995_157078147_157120555_157120663_157122329_157122398_157136468_157136699_157136803_157136887_157138808_157138950_157143806_157143960_157152717_157153011_157170431
transcript_110431.known	chr4	+	3210	13	FSM	ENSG00000164124.11	ENST00000296529.11	3210	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.62481230850387	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTATTACCTCTATA	158210356	False	NA	NA	False	AGTAAA	-26	NA	158210485	158255416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158210587_158211452_158211575_158212607_158212777_158215190_158215314_158217320_158217421_158219309_158219391_158232900_158232983_158235437_158235506_158237524_158237644_158240298_158240419_158241508_158241607_158244295_158244350_158253443
transcript_110437.nic	chr4	+	741	4	ISM	ENSG00000164124.11	ENST00000512481.5	731	6	-54	4465	-54	186	5prime_fragment	FALSE	canonical	1	2	junction_3	8.05536398239638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAGTGAATAGAGCTTAAA	158210275	True	NA	NA	False	AATAAA	-18	NA	158210404	158212884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_158210587_158211452_158211575_158212060_158212221_158212607
transcript_110438.known	chr4	+	1633	3	FSM	ENSG00000164124.11	ENST00000509278.5	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTACTCTTTTTATTTTTT	158210355	False	NA	NA	False	TATAAA	-26	NA	158210484	158214016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158210587_158211452_158211575_158212607
transcript_11044.known	chr1	+	1137	5	FSM	ENSG00000169241.19	ENST00000303343.12	1137	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	142.317207322235	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGATGGTTCATTCTCTA	155132156	True	NA	6	True	AATAAA	-18	NA	155135849	155138852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155136827_155136952_155137978_155138099_155138179
transcript_110441.known	chr4	+	3111	13	FSM	ENSG00000171503.13	ENST00000511912.6	3111	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	11.6726175299288	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTAAGGTGTCAAAAGAA	158671917	True	NA	NA	False	NA	NA	NA	158672295	158709623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158680466_158680608_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_110443.known	chr4	+	1903	12	FSM	ENSG00000171503.13	ENST00000307738.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.1101009859348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTCTGCATATTACT	158672309	True	NA	-64	True	NA	NA	NA	158672338	158708599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158682194_158682425_158684591_158684674_158685100_158685220_158690347_158690426_158695496_158695644_158697558_158697700_158698986_158699131_158703422_158703592_158706188_158706372_158706628_158706851_158708363
transcript_11045.known	chr1	+	1166	5	FSM	ENSG00000169241.19	ENST00000650403.1	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	114.180504027614	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132164	True	NA	5	True	AATAAA	-17	NA	155135857	155138851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155137560_155137723_155137978_155138099_155138179
transcript_110451.known	chr4	+	1411	3	FSM	ENSG00000171503.13	ENST00000436096.3	1411	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATATACAGAGGACCAA	158671833	False	NA	NA	False	AAGAAA	-45	NA	158672205	158683179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158680466_158680608_158682194
transcript_110452.known	chr4	-	1103	2	FSM	ENSG00000205208.5	ENST00000508836.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATATTTTTTGTACTTG	-158672148	True	NA	NA	False	AATATA	-3	NA	158672255	158668924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158669769_158671996
transcript_110453.known	chr4	+	987	2	FSM	ENSG00000171503.13	ENST00000510353.5	987	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAAAAGAAGAAGA	158672287	False	NA	31	True	NA	NA	NA	158672315	158680101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_158672491_158679289
transcript_110455.known	chr4	-	3358	2	FSM	ENSG00000205208.5	ENST00000508457.1	3358	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTAATCTGTCTTTTG	-158668406	True	NA	-9	True	AATAAA	-15	NA	158671892	158666683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158669765_158671615
transcript_110461.known	chr4	-	3366	2	FSM	ENSG00000205208.5	ENST00000379205.5	3366	2	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	0	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTCTTTTGTTATAGGGA	-158668401	True	NA	0	True	AATAAA	-24	NA	158671887	158666674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158669769_158671615
transcript_110462.known	chr4	-	1830	10	FSM	ENSG00000171497.5	ENST00000307720.4	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_6	35.0428309358705	1760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTCCTTCGATTCTT	-158714399	True	NA	-5	True	AATAAA	-23	NA	158723396	158709126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_158709825_158710627_158710671_158710761_158710849_158713118_158713261_158715296_158715404_158715561_158715685_158717011_158717201_158719179_158719287_158721342_158721484_158723203
transcript_110467.known	chr4	-	1876	8	FSM	ENSG00000145414.9	ENST00000274054.3	1876	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	24.2705835218232	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAATTCATGCCTTCTC	-163163273	True	NA	-26	True	ATTAAA	-22	NA	163166890	163128668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163129349_163133153_163133257_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_110468.nnic	chr4	-	1511	7	NNC	ENSG00000145414.9	novel	385	3	NA	NA	-32	6142	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	46.7929838045549	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATAGCCTGTTGGGTGGT	-163163305	True	NA	-5	True	AATAAA	-16	NA	163166922	163103930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_163104317_163137198_163137251_163140222_163140384_163145781_163145865_163148340_163148435_163164216_163164392_163166362
transcript_11047.known	chr1	+	1245	5	FSM	ENSG00000169241.19	ENST00000622581.4	1245	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	173.046958944675	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTCATTCTCTACTCAT	155132118	True	NA	11	True	AATAAA	-23	NA	155135811	155138857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135973_155136827_155136952_155137560_155137723_155137978_155138099_155138179
transcript_110470.known	chr4	-	1159	4	FSM	ENSG00000145414.9	ENST00000502973.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	60.4777277644883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAACTTTTTGCTGTTCT	-163163135	False	NA	-7	True	AATAAA	-9	NA	163166752	163156963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163157455_163158224_163158328_163164216_163164392_163166362
transcript_110472.nnic	chr4	-	1234	3	NIC	ENSG00000145414.9	novel	1159	4	NA	NA	-32	8	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	76.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGTTCTTTGATTTT	-163163305	True	NA	1	True	AATAAA	-17	NA	163166922	163156955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_163157455_163164216_163164392_163166362
transcript_110473.nnic	chr4	-	1027	3	NIC	ENSG00000145414.9	novel	1159	4	NA	NA	-32	-199	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	76.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGTGTGTGGGAAAT	-163163305	True	NA	NA	False	AATAAA	-16	NA	163166922	163157162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_163157455_163164216_163164392_163166362
transcript_110475.known	chr4	+	1890	4	FSM	ENSG00000164129.12	ENST00000338566.8	1890	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.0184900284226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGTACTTTTGTCCAAAA	163343371	True	NA	NA	False	AGTAAA	-17	NA	163343891	163351934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163344001_163345713_163345754_163347451_163347523_163350264
transcript_110479.known	chr4	-	568	4	FSM	ENSG00000164128.7	ENST00000512819.1	568	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	40.4722126896961	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTACCATCTTTAACACT	-163331356	True	NA	NA	False	NA	NA	NA	163332596	163325625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163325759_163325855_163326135_163326664_163326706_163332481
transcript_110482.known	chr4	-	2762	3	FSM	ENSG00000164128.7	ENST00000296533.3	2762	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	4.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCTCTTTCAGTTTCAT	-163331356	True	NA	-2	True	ATTAAA	-27	NA	163332596	163323961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163325759_163325855_163326706_163332481
transcript_110487.known	chr4	+	1418	1	FSM	ENSG00000164129.12	ENST00000506953.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAAATGCTGGGGTCATA	163349698	False	NA	51	True	NA	NA	NA	163350218	163351636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163350200_163351600
transcript_110488.known	chr4	-	1017	4	FSM	ENSG00000164128.7	ENST00000509586.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.8807831827438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACCTGCCATCCAATACG	-163331356	True	NA	49	True	AATGAA	-36	NA	163332596	163324973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_163325759_163325855_163325932_163326664_163326706_163332481
transcript_110492.known	chr4	+	933	7	FSM	ENSG00000198498.10	ENST00000509657.5	933	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	325.528501909672	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGATCTGCAGAAGTTG	163494429	False	NA	NA	False	AATAGA	-3	NA	163494441	163519720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163494560_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_11050.known	chr1	+	1003	4	FSM	ENSG00000169241.19	ENST00000368405.7	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	158.34421015272	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132165	True	NA	5	True	AATAAA	-17	NA	155135858	155138851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155135992_155136298_155136377_155137978_155138099_155138179
transcript_110506.known	chr4	+	1749	7	FSM	ENSG00000198498.10	ENST00000358572.10	1749	7	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_3	64.0999653319372	5318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACAGTCCTAATTTT	163483581	True	NA	16	True	AATAAA	-20	NA	163494689	163520539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163515312_163515462_163517433_163517477_163519333
transcript_110507.known	chr4	+	803	6	FSM	ENSG00000198498.10	ENST00000513272.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	354.91937112533	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTGATCTGCAGAAGTT	163483558	True	NA	NA	False	AATAGA	-2	NA	163494666	163519719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_163494805_163507032_163507146_163512821_163512860_163514073_163514159_163517433_163517477_163519333
transcript_110512.nnic	chr4	+	907	3	NNC	ENSG00000248329.6	novel	551	2	NA	NA	-266	-91	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGACTTTTGAGAATT	164876897	False	NA	10	True	AATAAA	-18	NA	164876911	164879165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_164877408_164878107_164878273_164878919
transcript_110513.known	chr4	+	2432	3	FSM	ENSG00000248329.6	ENST00000507152.6	2432	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	23	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGTCCTTACTTT	164872429	True	NA	16	True	AATAAA	-18	NA	164877177	164897527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_164877408_164878919_164879010_164895415
transcript_110517.nnic	chr4	+	861	3	NIC	ENSG00000248329.6	novel	674	4	NA	NA	-266	35	combination_of_known_splicesites	FALSE	canonical	3	15	junction_2	71	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGGATATCAGGAGTGAG	164876897	False	NA	NA	False	AATAAA	-21	NA	164876911	164899000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_164877408_164878919_164879010_164898725
transcript_110519.nnic	chr4	+	567	3	NNC	ENSG00000248329.6	novel	551	2	NA	NA	-193	-91	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	74.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGACTTTTGAGAATT	164876968	False	NA	10	True	AATAAA	-18	NA	164876984	164879165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_164877226_164877327_164877408_164878919
transcript_110526.known	chr4	+	551	2	FSM	ENSG00000248329.6	ENST00000515275.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTAACAGCTATTTGGGGG	164872445	False	NA	101	True	NA	NA	NA	164877193	164879256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_164877408_164878919
transcript_110527.nnic	chr4	+	483	2	NNC	ENSG00000248329.6	novel	551	2	NA	NA	-189	-91	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACATGACTTTTGAGAATT	164872240	True	NA	10	True	AATAAA	-18	NA	164876988	164879165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_164877226_164878919
transcript_110530.known	chr4	-	2237	3	FSM	ENSG00000183439.9	ENST00000508856.2	2237	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTGAAACATATATTACT	-164976910	True	NA	NA	False	ATTAAA	-45	NA	164977668	164968373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_164970340_164976687_164976821_164977530
transcript_110537.known	chr4	-	9953	6	FSM	ENSG00000170088.14	ENST00000306480.11	9953	6	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_2	1.89736659610103	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTATAATCACTGCTAT	-165111114	True	NA	NA	False	AATAAA	-17	NA	165112860	165070607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_165079797_165085585_165085689_165088467_165088603_165100627_165100893_165102949_165103097_165112746
transcript_110546.nic	chr4	-	484	3	ISM	ENSG00000170088.14	ENST00000505095.1	789	6	-34	17200	-28	-17200	5prime_fragment	FALSE	canonical	1	3	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACGTACACTTTTACTTA	-165111142	True	NA	NA	False	NA	NA	NA	165112888	165102785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_165103097_165111648_165111680_165112746
transcript_110547.nic	chr4	-	456	2	ISM	ENSG00000170088.14	ENST00000306480.11	9953	6	-34	32181	-34	-17203	5prime_fragment	FALSE	canonical	3	30	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTACGTACACTTTTAC	-165111148	True	NA	NA	False	NA	NA	NA	165112894	165102788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_165103097_165112746
transcript_110550.nnic	chr4	+	932	6	NNC	ENSG00000052802.13	novel	2227	6	NA	NA	-21	541	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	643.535981900002	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTTTTGAAGCC	165327630	False	NA	NA	False	AATAAA	-16	NA	165327645	165341181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341085
transcript_110551.known	chr4	+	2227	6	FSM	ENSG00000052802.13	ENST00000261507.11	2227	6	0	0	0	0	multi-exon	FALSE	canonical	3	1464	junction_1	93.9191141355156	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGGTTTCTTTTCTTTT	165307773	True	NA	15	True	AATAAA	-2	NA	165327668	165343164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_165327765_165333339_165333626_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_110559.known	chr4	+	1789	5	FSM	ENSG00000052802.13	ENST00000393766.6	1789	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	580.526216031628	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGAGCTCTTGAA	165307790	True	NA	-26	True	ATTAAA	-39	NA	165327685	165343029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_165327765_165337788_165337938_165338651_165338779_165340220_165340376_165341750
transcript_110563.known	chr4	+	973	5	FSM	ENSG00000052802.13	ENST00000507013.5	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	659.906053919799	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGAAACTATTGATGTCC	165307771	True	NA	NA	False	NA	NA	NA	165327666	165340351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_165327947_165333339_165333626_165337788_165337938_165338651_165338779_165340220
transcript_110564.known	chr4	+	2582	9	FSM	ENSG00000109472.14	ENST00000402744.9	2582	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_8	13.256484262428	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTGGACACAAACTCTAA	165378996	False	NA	NA	False	TATAAA	-16	NA	165379007	165498547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_165379529_165464389_165464587_165467687_165467856_165482241_165482360_165484421_165484605_165487437_165487578_165493170_165493271_165495558_165495678_165497511
transcript_11057.nic	chr1	+	1177	3	ISM	ENSG00000169241.19	ENST00000368405.7	1003	4	133	0	95	0	3prime_fragment	FALSE	canonical	3	64	junction_1	187	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGATGGTTCATTCTCT	155132298	False	NA	5	True	AATAAA	-17	NA	155135991	155138851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_155136377_155137978_155138099_155138179
transcript_11058.known	chr1	+	596	3	FSM	ENSG00000169241.19	ENST00000484027.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	210	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTTTGGGAGGCCAAGG	155136289	True	NA	NA	False	NA	NA	NA	155136315	155138574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155136397_155137978_155138099_155138179
transcript_110582.nnic	chr4	+	1420	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	270	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATCATTTATATTAA	166705677	True	NA	13	True	ATTAAA	-17	NA	166716426	166736655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_166716724_166725235_166725320_166735616
transcript_110584.nnic	chr4	+	1903	3	Antisense	novelGene_ENSG00000196104.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	282	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAATAAACGAACAAAG	166705663	True	NA	NA	False	AATGAA	-39	NA	166716412	166744944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_166716724_166725235_166725320_166743436
transcript_11059.known	chr1	-	396	2	FSM	ENSG00000179085.8	ENST00000368400.5	396	2	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_1	0	4529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	-155138148	True	NA	-21	True	ATTAAA	-20	NA	155140531	155139890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155140246_155140490
transcript_110591.known	chr4	-	1253	7	FSM	ENSG00000137628.18	ENST00000681832.1	1253	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.10554159678513	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTGTGCCATTAAATGA	-168318561	True	NA	NA	False	AATAAA	-28	NA	168318727	168293627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168293946_168302299_168302417_168306378_168306721_168308005_168308196_168310997_168311068_168311255_168311366_168318621
transcript_110592.known	chr4	-	623	5	FSM	ENSG00000181381.15	ENST00000513901.1	623	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCAGCTAATTTTTGT	-168480392	True	NA	NA	False	NA	NA	NA	168480491	168470703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168470838_168471746_168471937_168472454_168472525_168472695_168472810_168480376
transcript_11060.known	chr1	-	486	2	FSM	ENSG00000179085.8	ENST00000341298.3	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTTAGTTTGAGTATG	NA	False	NA	-21	True	ATTAAA	-20	NA	155140595	155139890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155140272_155140490
transcript_110602.nnic	chr4	-	1211	6	NNC	ENSG00000145439.12	novel	3440	5	NA	NA	-72	-2405	at_least_one_novel_splicesite	FALSE	canonical	3	121	junction_2	76.1067671104219	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTGACAAATTGTGG	NA	False	NA	-11	True	TATAAA	-18	NA	169010347	168989994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_168990329_168998201_168998286_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_110604.nic	chr4	-	1076	5	NIC	ENSG00000145439.12	novel	1052	5	NA	NA	-72	-30690	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	119.717375514167	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTAAGTGTTCTCTC	NA	False	NA	-8	True	AGTAAA	-20	NA	169010347	168894482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_168894766_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_110606.known	chr4	-	3440	5	FSM	ENSG00000145439.12	ENST00000306193.8	3440	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	63.5314882558248	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGATGTTAATTTTAT	-169005842	True	NA	-5	True	AATAAA	-19	NA	169010255	168987589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_168990329_169002070_169002206_169006754_169006892_169007635_169007757_169009947
transcript_110612.known	chr4	-	1602	4	FSM	ENSG00000145439.12	ENST00000504480.5	1602	4	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	18.4571575998762	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATTA	-169005841	True	NA	NA	False	NA	NA	NA	169010254	169001168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169002206_169006754_169006892_169007635_169007757_169009947
transcript_110615.nic	chr4	-	887	2	ISM	ENSG00000154447.15	ENST00000284637.14	5120	12	-94	174354	-94	301	5prime_fragment	FALSE	canonical	3	54	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTAGATAGTCTCTGTTA	-169270162	True	NA	NA	False	AATAAA	-21	NA	169271050	169268612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_169269308_169270858
transcript_110616.known	chr4	-	5120	12	FSM	ENSG00000154447.15	ENST00000284637.14	5120	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.50668186566515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGTCCCTTGTGTCAGT	-169270068	True	NA	-1	True	ATTAAA	-19	NA	169270956	169094258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169096688_169106846_169107206_169116268_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819_169269308_169270858
transcript_110617.known	chr4	-	2020	9	FSM	ENSG00000154447.15	ENST00000508685.1	2020	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	8.74285422502285	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGACCATACTTACTTAC	-169269083	False	NA	3	True	NA	NA	NA	169269093	169116268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169116631_169117522_169117783_169120818_169120990_169122099_169122267_169130045_169130157_169136317_169136621_169155479_169155576_169156403_169156680_169268819
transcript_11062.known	chr1	+	3178	10	FSM	ENSG00000163462.19	ENST00000334634.9	3178	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.96908269804914	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCAATCATTCCTGTGAGT	155173116	True	NA	27	True	AATAAA	-34	NA	155173848	155184970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_110623.nic	chr4	-	700	3	ISM	ENSG00000137601.18	ENST00000692868.1	3650	15	-8	43321	0	7643	5prime_fragment	FALSE	canonical	3	26	junction_2	4.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATTTTTAGTTTG	-169611329	True	NA	NA	False	NA	NA	NA	169612632	169602513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_169602679_169612019_169612144_169612221
transcript_110624.known	chr4	+	6635	13	FSM	ENSG00000109572.15	ENST00000513761.6	6635	13	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	13.9071823969567	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGAGTAGATCATTTAT	169617032	True	NA	NA	False	AGTAAA	-17	NA	169620577	169723673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169719906
transcript_110626.nnic	chr4	+	1210	3	NNC	ENSG00000109572.15	novel	3208	12	NA	NA	-8	1606	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	55	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATTATCCTGGATTATC	169616972	True	NA	NA	False	ATTAAA	-14	NA	169620517	169644774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_169621064_169635912_169636089_169644286
transcript_110627.known	chr4	+	3635	14	FSM	ENSG00000109572.15	ENST00000347613.8	3635	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	32.2895553486787	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCTCTCTACTGAG	169616980	True	NA	NA	False	NA	NA	NA	169620525	169720545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_169621064_169635912_169636089_169680049_169680208_169687657_169687758_169689042_169689231_169690529_169690653_169692113_169692321_169695611_169695693_169697188_169697735_169703997_169704185_169706867_169707267_169713078_169713296_169717791_169717868_169719906
transcript_11063.known	chr1	-	804	8	FSM	ENSG00000185499.17	ENST00000368390.7	804	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4.10077145554495	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	-155192795	False	NA	NA	False	NA	NA	NA	155192867	155186122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192284_155192785
transcript_110631.known	chr4	-	1216	8	FSM	ENSG00000056050.7	ENST00000393381.3	1216	8	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_4	55.0213316703214	3363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTTCTTCTGCCTGG	-169749641	True	NA	-9	True	AATAAA	-18	NA	169757944	169729469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_169729710_169731703_169731877_169737659_169737748_169741956_169742108_169748743_169748843_169750535_169750726_169753675_169753836_169757829
transcript_110633.nnic	chr4	+	920	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTCC	169939431	True	NA	11	True	AATAAA	-22	NA	169940276	169941684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_169940379_169940520_169940661_169941006
transcript_110636.nnic	chr4	+	774	3	NNC	ENSG00000289508.1	novel	666	3	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	4.5	253	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTCC	169940190	True	NA	11	True	AATAAA	-22	NA	169940203	169941684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_169940379_169940520_169940661_169941225
transcript_110639.nnic	chr4	+	1339	2	NNC	ENSG00000289508.1	novel	666	3	NA	NA	-72	0	intron_retention	FALSE	canonical	3	26	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTCC	169940190	True	NA	11	True	AATAAA	-22	NA	169940203	169941684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_169940379_169940520
transcript_110646.known	chr4	-	667	3	FSM	ENSG00000198948.12	ENST00000504999.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTAGGCTTTAAAGTTG	-170025423	True	NA	NA	False	NA	NA	NA	170026339	170005583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170006011_170006602_170006737_170026233
transcript_110647.known	chr4	-	1505	3	FSM	ENSG00000198948.12	ENST00000393702.7	1505	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGTGAGTCACCTCACT	-170027089	False	NA	-3	True	AATAAA	-16	NA	170027210	170004990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170006011_170006602_170006737_170026859
transcript_11065.known	chr1	-	1032	8	FSM	ENSG00000185499.17	ENST00000368392.7	1032	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	4.27140468220744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGGGCTCATGCCTG	-155192821	False	NA	NA	False	NA	NA	NA	155192893	155185947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188232_155192182_155192311_155192785
transcript_110658.known	chr4	-	2101	14	FSM	ENSG00000109576.14	ENST00000353187.6	2101	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	16.9597504726536	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACATACCTAAAGGCATCA	-170089103	True	NA	NA	False	AATAAA	-12	NA	170090221	170060228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_11066.known	chr1	-	859	8	FSM	ENSG00000185499.17	ENST00000337604.6	859	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	4.3985155195259	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	-155192796	False	NA	NA	False	NA	NA	NA	155192868	155186122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155188162_155188286_155192182_155192284_155192785
transcript_110665.nnic	chr4	-	846	6	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-12	-2021	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_5	25.7184758490856	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	NA	False	NA	-2	True	AATAAA	-30	NA	170090308	170075270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089623_170089737_170090143
transcript_110667.nnic	chr4	-	874	5	NNC	ENSG00000109576.14	novel	2250	13	NA	NA	-172	-2021	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	38.1862213370215	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATACTCATAATTT	-170088448	False	NA	-2	True	AATAAA	-30	NA	170089566	170075270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_170075462_170078508_170078584_170087115_170087249_170088395_170088565_170089260
transcript_110668.known	chr4	-	2250	13	FSM	ENSG00000109576.14	ENST00000337664.9	2250	13	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	14.0564338768172	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAAGGCATCAGACCCAT	-170088838	False	NA	NA	False	AATAAA	-19	NA	170089956	170060221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_170060970_170061891_170061994_170064718_170064826_170066413_170066479_170067326_170067389_170068590_170068688_170069147_170069231_170070586_170070653_170073135_170073346_170078508_170078584_170087115_170087249_170088395_170088565_170089623
transcript_110671.known	chr4	+	1316	3	FSM	ENSG00000250266.3	ENST00000667527.2	2474	3	0	1158	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170226534	170283723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_170226784_170276581_170276676_170282750
transcript_110672.known	chr4	+	1366	3	FSM	ENSG00000250266.3	ENST00000660060.1	1366	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCGTTGCGCATGTTTC	NA	False	NA	NA	False	AATAAA	-23	NA	170259856	170283723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_170260156_170276581_170276676_170282750
transcript_110673.nic	chr4	+	4306	12	NIC	ENSG00000109586.12	novel	4249	12	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_6	192.064297085315	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	173155044	True	NA	16	True	AATAAA	-19	NA	173168753	173323967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173297794_173297978_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_110674.known	chr4	+	4249	12	FSM	ENSG00000109586.12	ENST00000265000.9	4249	12	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_6	55.201059997009	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTTTTTTGGTGCTTGT	173155101	True	NA	16	True	AATAAA	-19	NA	173168810	173323967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430_173318560_173321579
transcript_110677.nic	chr4	+	2019	11	ISM	ENSG00000109586.12	ENST00000265000.9	4249	12	-57	5307	-57	0	5prime_fragment	FALSE	canonical	3	463	junction_6	54.886154902671	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTTGCATTTTCCTCTC	173155044	True	NA	NA	False	AATAAA	-21	NA	173168753	173318660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_173168962_173247979_173248441_173292107_173292275_173295395_173295527_173295763_173295844_173298114_173298298_173302046_173302165_173303995_173304119_173313957_173314177_173317633_173317733_173318430
transcript_110697.known	chr4	-	1441	5	FSM	ENSG00000164104.12	ENST00000296503.10	1441	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1156.98714340307	7965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATATATATACACATATAT	-173312234	True	NA	NA	False	NA	NA	NA	173334358	173331375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334271
transcript_110698.known	chr4	-	1175	5	FSM	ENSG00000164104.12	ENST00000446922.6	1175	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	1089.88654799479	14403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-173312267	True	NA	-10	True	AATAAA	-14	NA	173334391	173331700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499_173333670_173334245
transcript_110699.known	chr4	-	1032	4	FSM	ENSG00000164104.12	ENST00000438704.6	1032	4	0	0	0	0	multi-exon	FALSE	canonical	3	2635	junction_2	28.6395220320141	3861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATTGTCTTTGTCTTA	-173333599	False	NA	-10	True	AATAAA	-14	NA	173333672	173331700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173332239_173332820_173332996_173333068_173333215_173333499
transcript_11070.known	chr1	-	927	7	FSM	ENSG00000185499.17	ENST00000438413.5	927	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.94694069321861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGGGCTCATGCCTG	-155192821	False	NA	NA	False	NA	NA	NA	155192893	155185947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188055_155192182_155192284_155192785
transcript_110700.known	chr4	-	1841	3	FSM	ENSG00000164104.12	ENST00000511316.1	1841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1337	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTTCTATTGTCTTTGT	-173312308	True	NA	-14	True	AATAAA	-10	NA	173334432	173331704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173333215_173333499_173333670_173334271
transcript_110702.known	chr4	+	1097	4	FSM	ENSG00000164105.4	ENST00000296504.4	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	25.152865973218	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGCTTCAGTGTATTTA	173367759	True	NA	NA	False	AATAAA	-15	NA	173370953	173377532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_173371498_173373389_173373516_173373938_173374038_173377204
transcript_110703.known	chr4	-	1489	3	FSM	ENSG00000272870.4	ENST00000651702.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGGTCTCACCATGTT	-173369440	False	NA	NA	False	NA	NA	NA	173369516	173349542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173350828_173351365_173351487_173369433
transcript_110704.nnic	chr4	-	643	3	NNC	ENSG00000272870.4	novel	1026	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	13.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	-173369529	True	NA	-40	True	AATAAA	-13	NA	173369817	173363779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_173364199_173369433_173369611_173369770
transcript_110705.nnic	chr4	-	1381	3	NNC	ENSG00000272870.4	novel	1026	3	NA	NA	23	0	intron_retention	FALSE	canonical	2	2	junction_2	14.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	-173370622	True	NA	-40	True	AATAAA	-13	NA	173370698	173363779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_173364199_173369433_173369611_173369913
transcript_110706.known	chr4	-	1026	3	FSM	ENSG00000272870.4	ENST00000609153.2	1026	3	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	11	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTGGGTTTCAATG	NA	False	NA	-40	True	AATAAA	-13	NA	173370721	173363779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173364199_173369433_173369611_173370291
transcript_110707.known	chr4	-	587	2	FSM	ENSG00000272870.4	ENST00000608794.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTATTTGTTGCTATGC	-173369527	True	NA	NA	False	NA	NA	NA	173369815	173363993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173364199_173369433
transcript_110708.known	chr4	-	284	2	FSM	ENSG00000272870.4	ENST00000608892.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAGGAAAAAGAAAGATGA	-173370250	False	NA	NA	False	AAGAAA	-26	NA	173370326	173369361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_173369611_173370291
transcript_11071.known	chr1	-	667	7	FSM	ENSG00000185499.17	ENST00000498431.5	667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.13138237134266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGAGCTGAGTGGCCAGC	-155192795	False	NA	NA	False	NA	NA	NA	155192867	155186122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155188007_155188064_155188162_155188232_155192182_155192284_155192785
transcript_110720.known	chr4	-	1980	6	FSM	ENSG00000164117.14	ENST00000393674.7	1980	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2.24499443206436	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTGCTTATATGTG	-174283031	True	NA	2	True	AATAAA	-28	NA	174283667	174236657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174237600_174238993_174239191_174241099_174241219_174259698_174259826_174262763_174263101_174283409
transcript_110725.known	chr4	+	4298	12	FSM	ENSG00000164118.13	ENST00000503780.6	4298	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30.7928294755035	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTTGTTTCATGCCATT	174282391	True	NA	14	True	AATAAA	-15	NA	174283910	174320328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_174283944_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334
transcript_110727.known	chr4	+	3824	14	FSM	ENSG00000164118.13	ENST00000396791.7	3824	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	37.1596587267212	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTCTATTTCTCTGTTGA	174282385	True	NA	NA	False	AATAAA	-20	NA	174283904	174332293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038_174302187_174303702_174303850_174304246_174304370_174308688_174308860_174309849_174310057_174310782_174310859_174316165_174316291_174316529_174316568_174317334_174318666_174318834_174319088_174331481
transcript_110735.known	chr4	+	600	4	FSM	ENSG00000164118.13	ENST00000505124.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	52.9297227987787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAATTGTGTGATGAAAAA	174283521	True	NA	NA	False	NA	NA	NA	174283729	174303801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_174283944_174299071_174299211_174302038_174302187_174303702
transcript_110736.nic	chr4	+	751	4	ISM	ENSG00000164118.13	ENST00000396791.7	3824	14	8	29889	2	-1397	5prime_fragment	FALSE	canonical	3	36	junction_1	37.6327280730779	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTTGTTGGCTATTGT	174282393	True	NA	NA	False	AATAAA	-17	NA	174283912	174302404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_174284062_174297965_174298063_174299071_174299211_174302038
transcript_110738.known	chr4	-	2619	7	FSM	ENSG00000164120.14	ENST00000296522.11	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	3.43592135468138	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTTTCTTGTATTTTT	-174522475	False	NA	NA	False	ATTAAA	-21	NA	174522488	174490174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_110740.known	chr4	-	1535	7	FSM	ENSG00000164120.14	ENST00000510901.5	1535	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.55902698029904	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACATACAAGTTCATACTT	NA	False	NA	NA	False	TTTAAA	-21	NA	174523065	174491570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174492095_174493150_174493315_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522623
transcript_110743.known	chr4	-	1171	6	FSM	ENSG00000164120.14	ENST00000296521.11	1171	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.81280999384984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTTCTTAGAGTAGTAT	-174522368	True	NA	NA	False	NA	NA	NA	174522487	174491457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174492095_174495547_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_110745.known	chr4	-	1910	5	FSM	ENSG00000164120.14	ENST00000504433.1	1910	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.78564169540279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGCCTTTTATCTGTTT	-174522486	False	NA	NA	False	AATAAA	-17	NA	174522499	174506742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174508184_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_110746.known	chr4	-	666	5	FSM	ENSG00000164120.14	ENST00000512410.1	666	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	3.11247489949718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTGGATTCTAAATACA	-174522419	False	NA	NA	False	AATAAA	-19	NA	174522432	174495360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_174495625_174508695_174508793_174517970_174518078_174521943_174522068_174522358
transcript_110749.nnic	chr4	+	700	2	Antisense	novelGene_ENSG00000145451.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCATAATTTTCCACT	174778428	True	NA	NA	False	ATTAAA	-18	NA	174778461	174787834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_174778605_174787277
transcript_110752.known	chr4	-	1142	6	FSM	ENSG00000150628.7	ENST00000280191.7	1142	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATTAGTACAGAATGAGC	NA	False	NA	NA	False	ATTAAA	-38	NA	176195585	176184578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_176184893_176188118_176188236_176192626_176192848_176192957_176193077_176193452_176193583_176195344
transcript_110755.known	chr4	+	4569	5	FSM	ENSG00000129128.13	ENST00000503362.2	4569	5	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	26.3581107061944	2791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTTGTGTTTCTAATGTG	176312057	True	NA	15	True	AATAAA	-18	NA	176319965	176332245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161_176327278_176328197
transcript_110757.known	chr4	+	589	4	FSM	ENSG00000129128.13	ENST00000513139.1	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	20.6774165590278	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGAAAGAAGTATTTATG	176312093	True	NA	NA	False	AGTAAA	-11	NA	176320001	176327381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_176320220_176322169_176322244_176324180_176324258_176327161
transcript_110761.known	chr4	+	2655	4	FSM	ENSG00000129128.13	ENST00000507678.5	2655	4	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	22.647050335284	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGTTGGTTTGTTTTT	176312082	True	NA	73	True	AATGAA	-35	NA	176319990	176328406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_176322244_176324180_176324258_176327161_176327278_176328197
transcript_110767.known	chr4	+	2363	10	FSM	ENSG00000109674.4	ENST00000264596.4	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.9881237299577	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACAAGTCTATTTTTAAA	177307163	True	NA	NA	False	ATTAAA	-25	NA	177309873	177362936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379_177351550_177353307_177353729_177360502_177360678_177362288
transcript_110771.nic	chr4	+	1499	7	ISM	ENSG00000109674.4	ENST00000264596.4	2363	10	-71	11078	-71	-2421	5prime_fragment	FALSE	canonical	3	62	junction_2	14.762000767737	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCAGCAACTTTCGAGT	177307092	True	NA	NA	False	AATAAA	-16	NA	177309802	177351858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_177310110_177322458_177322581_177335687_177335823_177336107_177336322_177339782_177339858_177341475_177341643_177351379
transcript_110773.known	chr4	-	2037	9	FSM	ENSG00000038002.9	ENST00000264595.7	2037	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	7.37288105152931	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAGAATTTCAGCTGTTT	-177441614	True	NA	-4	True	AATAAA	-22	NA	177442437	177430773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_177431809_177433213_177433348_177434381_177434490_177436275_177436352_177437404_177437520_177438744_177438858_177439575_177439689_177440272_177440427_177442248
transcript_110775.known	chr4	+	2161	6	FSM	ENSG00000250131.2	ENST00000507023.1	2161	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17.2927730569738	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGTGAAGTTAATTAATAA	177443741	True	NA	NA	False	AATAAA	-18	NA	177444978	177677126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_177445444_177451474_177451591_177593471_177593547_177596460_177596532_177623658_177623803_177675836
transcript_110791.nnic	chr4	+	999	3	NNC	ENSG00000250131.2	novel	2161	6	NA	NA	-6	-135470	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	17.5	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTAGCCGAAAATCCTTA	177444959	False	NA	NA	False	AATAAA	-23	NA	177444972	177464735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_177445444_177451474_177451591_177464323
transcript_110801.nnic	chr4	-	893	4	NNC	ENSG00000250993.1	novel	539	3	NA	NA	-244	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1.63299316185545	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTCGGCATGGTTG	-179465413	True	NA	NA	False	TTTAAA	-18	NA	179465549	179389133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_179389502_179390029_179390090_179390492_179390603_179465194
transcript_110803.known	chr4	-	539	3	FSM	ENSG00000250993.1	ENST00000512036.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCATGTTCGGCATGGTTG	-179465169	False	136	NA	False	TTTAAA	-18	NA	179465305	179389133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_179389502_179390029_179390090_179465194
transcript_110809.known	chr4	-	2260	4	FSM	ENSG00000177822.9	ENST00000315302.6	2260	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.71547606649408	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAAATACTCTAGAA	-182143823	True	NA	NA	False	NA	NA	NA	182144466	182141649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182143546_182143702_182143845_182144046_182144141_182144338
transcript_110811.known	chr4	-	550	3	FSM	ENSG00000177822.9	ENST00000505537.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGTTGCTTATTTCAG	-182084851	True	NA	NA	False	ATTAAA	-18	NA	182085084	182079628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182079877_182081755_182081827_182084853
transcript_110812.known	chr4	+	1237	4	FSM	ENSG00000218336.9	ENST00000513201.1	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	16.7597401199687	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTAACTTTTCACCAGC	182143057	False	NA	NA	False	AAAACA	-24	NA	182143986	182350316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_182144162_182323945_182324253_182346650_182346930_182349840
transcript_110820.known	chr4	-	794	7	FSM	ENSG00000129187.15	ENST00000510370.5	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	219.835102343148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGATTATCGTCTTCTAA	-182915262	True	NA	NA	False	NA	NA	NA	182917389	182891371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182916418_182916540_182917287
transcript_110830.known	chr4	-	1931	6	FSM	ENSG00000129187.15	ENST00000357067.7	1931	6	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_5	75.687779726981	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTACCAAAGCATGTACAT	-182915252	True	NA	-20	True	ATTAAA	-17	NA	182917379	182890103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917287
transcript_110831.known	chr4	-	578	6	FSM	ENSG00000129187.15	ENST00000503182.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	200.645358780112	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAGCAGACCGAGTCAAAA	NA	False	NA	NA	False	NA	NA	NA	182917936	182891428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917872
transcript_110837.known	chr4	-	1829	5	FSM	ENSG00000129187.15	ENST00000500813.6	1829	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	187.58797935902	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATTTTCTGCTCCTGTCC	-182915242	True	NA	-13	True	NA	NA	NA	182917369	182890059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917287
transcript_110840.known	chr4	-	1928	6	FSM	ENSG00000129187.15	ENST00000438320.7	1928	6	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	151.596306023597	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACATTTTTATGTTATTA	-182915259	True	NA	-7	True	ATTAAA	-30	NA	182917386	182890090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182914922_182915059_182915460_182915576_182917310
transcript_110841.known	chr4	-	879	5	FSM	ENSG00000129187.15	ENST00000507631.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	201.897715440269	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGTGTTCTTAATGGG	-182916925	False	NA	-21	True	AATAAA	-6	NA	182917396	182891013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_182891478_182893030_182893128_182894488_182894606_182915460_182915576_182917310
transcript_110845.nic	chr4	+	513	5	ISM	ENSG00000151718.16	ENST00000504005.5	5247	16	56075	47126	-815	1139	internal_fragment	FALSE	canonical	3	386	junction_3	37.7847522156756	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATGAAGAAAATGAGGACT	183264998	True	NA	NA	False	NA	NA	NA	183265053	183271177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_+_183265108_183265687_183265769_183265864_183265952_183268970_183269164_183271079
transcript_110850.known	chr4	+	2646	3	FSM	ENSG00000168564.6	ENST00000302350.4	2646	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	36.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTTTTTTTTCTCCAA	183442113	True	NA	20	True	ATTAAA	-30	NA	183444634	183448198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445070_183445534_183445635_183446087
transcript_110852.known	chr4	+	3542	3	FSM	ENSG00000168564.6	ENST00000504169.2	3542	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	26.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTGGTTTGGTAATTTC	183442114	True	NA	NA	False	AATAAA	-19	NA	183444635	183449064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445070_183445534_183445666_183446087
transcript_110855.known	chr4	+	888	3	FSM	ENSG00000168564.6	ENST00000506835.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCAAGAGCACTTCCCAG	183445163	True	NA	NA	False	AATACA	-11	NA	183445175	183446759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445292_183445534_183445635_183446087
transcript_110856.known	chr4	+	860	2	FSM	ENSG00000168564.6	ENST00000510928.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCATCACCCGTTTT	183442175	True	NA	NA	False	NA	NA	NA	183444696	183446021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183445070_183445534
transcript_110858.known	chr4	+	2458	2	FSM	ENSG00000168556.7	ENST00000302327.4	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTTTGTCCTTCATTCT	183503872	True	NA	NA	False	NA	NA	NA	183505057	183512429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183505368_183510281
transcript_110859.known	chr4	+	599	2	FSM	ENSG00000168556.7	ENST00000412117.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGAAATCCAAGTC	183506055	True	NA	NA	False	NA	NA	NA	183506081	183510643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183506319_183510281
transcript_110860.known	chr4	-	1393	7	FSM	ENSG00000182552.15	ENST00000512740.1	1393	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.6943714336675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCTTTCTTAAAACATT	-183657470	False	NA	NA	False	AATACA	-27	NA	183659156	183640728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651324_183658928
transcript_110864.known	chr4	-	1551	6	FSM	ENSG00000182552.15	ENST00000510968.5	1551	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.2615598766448	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAATGCTGAACTGTTA	-183657465	False	NA	NA	False	NA	NA	NA	183659151	183640459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646350_183646354_183646487_183646538_183649450_183649569_183650983_183651132_183658928
transcript_110869.known	chr4	-	2590	7	FSM	ENSG00000182552.15	ENST00000327570.13	2590	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.4081028413316	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTACACATTTTATT	-183657492	True	NA	0	True	AATAAA	-20	NA	183659178	183639635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_183641469_183646487_183646538_183649450_183649569_183650983_183651132_183651217_183651328_183655880_183655962_183658928
transcript_110870.known	chr4	+	4523	30	FSM	ENSG00000168538.16	ENST00000334690.11	4523	30	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	14.9700453979011	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCTTGTCTGTCTCTAT	183655635	True	NA	16	True	AATAAA	-16	NA	183659292	183713589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183659448_183663846_183664072_183666256_183666427_183667059_183667131_183668002_183668118_183674712_183674813_183675163_183675238_183677457_183677555_183679352_183679487_183680119_183680268_183682731_183682826_183683974_183684055_183684144_183684224_183684304_183684360_183684695_183684842_183685083_183685146_183685270_183685404_183686617_183686749_183691315_183691472_183692959_183693148_183693588_183693738_183693916_183694039_183694603_183694724_183697502_183697569_183697678_183697836_183701696_183701809_183704978_183705071_183706806_183706941_183708406_183708575_183712599
transcript_110871.known	chr4	+	481	2	FSM	ENSG00000287349.1	ENST00000653139.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCGAAACCCCTTATGG	183725816	False	NA	NA	False	AATAAA	-39	NA	183725829	183732570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183726200_183732459
transcript_110872.known	chr4	+	1055	3	FSM	ENSG00000173320.12	ENST00000506529.1	1055	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTCAGAGTATTGC	184010755	False	NA	NA	False	AAAACA	-6	NA	184010772	184017443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184011424_184011586_184011636_184017088
transcript_110873.known	chr4	+	10507	4	FSM	ENSG00000173320.12	ENST00000308497.9	10507	4	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	5.43650214343336	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTAAGTGGATTTTTTT	183905166	True	NA	16	True	ATTAAA	-16	NA	183905306	184023526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_183906957_184001324_184001478_184009157_184011424_184017088
transcript_110881.nnic	chr4	-	455	4	NNC	ENSG00000180712.5	novel	495	4	NA	NA	-231	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.816496580927726	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTGATTATCTAATCAAT	-184343889	True	NA	-5	True	AATAAA	-15	NA	184343967	184334291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_184334420_184334526_184334612_184341952_184342054_184343826
transcript_110887.nnic	chr4	-	370	3	NNC	ENSG00000180712.5	novel	888	3	NA	NA	-231	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTTGATTATCTAATCAAT	-184343889	True	NA	-5	True	AATAAA	-15	NA	184343967	184334291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_184334420_184341952_184342054_184343826
transcript_110888.known	chr4	-	2257	9	FSM	ENSG00000168310.11	ENST00000393593.8	2257	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_8	4.97336656601944	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAAGGGGCATCACTCC	-184473620	True	NA	-15	True	AATAAA	-22	NA	184474550	184387728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184389067_184390702_184390750_184398914_184399080_184408157_184408276_184418166_184418214_184418531_184418709_184419468_184419569_184428977_184429071_184474378
transcript_110890.nic	chr4	-	581	4	ISM	ENSG00000168310.11	ENST00000512020.5	731	6	-35	10367	-33	-351	5prime_fragment	FALSE	canonical	3	38	junction_3	4.64279609239471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTTACAGACTAAAATAA	-184473653	True	NA	NA	False	AAGAAA	-8	NA	184474583	184418525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr4_-_184418709_184419468_184419569_184428977_184429071_184474378
transcript_110894.known	chr4	-	2645	8	FSM	ENSG00000164305.19	ENST00000308394.9	2645	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	388.439263237497	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184636978	True	NA	-2	True	AATATA	-19	NA	184649447	184627695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_110896.known	chr4	-	964	7	FSM	ENSG00000164305.19	ENST00000517513.5	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	445.428913146269	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTTTTTTAGTTTGTAT	-184636978	True	NA	NA	False	ACTAAA	-16	NA	184649447	184629255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184648464_184648632_184649394
transcript_110897.known	chr4	-	2540	7	FSM	ENSG00000164305.19	ENST00000523916.5	2540	7	0	0	0	0	multi-exon	FALSE	canonical	3	764	junction_6	86.6206608661518	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAATGTCTTTGAGTTTTTT	-184637040	True	NA	-2	True	AATATA	-19	NA	184649509	184627695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184629502_184631036_184631158_184631764_184631941_184632267_184632397_184635293_184635419_184638400_184638469_184649394
transcript_1109.known	chr1	-	3163	12	FSM	ENSG00000078369.18	ENST00000378609.9	3163	12	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_11	320.105457829496	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGGTGATTATTT	-1863093	True	NA	-1	True	AATAAA	-19	NA	1891087	1785285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1839189_1839239_1890819
transcript_110902.known	chr4	+	2164	14	FSM	ENSG00000164306.11	ENST00000314970.11	2164	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	12.0600077521637	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGGAGAAATCGCCTTAT	184648329	True	NA	5	True	ATTAAA	-19	NA	184649737	184694952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184649909_184652022_184652101_184657081_184657321_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_110915.known	chr4	+	2007	13	FSM	ENSG00000164306.11	ENST00000515774.5	2007	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16.2779673860781	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCCTTATTAATTAATCAA	184648258	True	NA	16	True	ATTAAA	-30	NA	184649666	184694963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184649909_184652022_184652101_184659339_184659438_184661773_184661904_184665916_184666065_184672172_184672461_184678231_184678395_184682247_184682337_184685408_184685499_184685575_184685685_184691498_184691582_184691665_184691713_184694521
transcript_110944.known	chr4	+	804	3	FSM	ENSG00000164306.11	ENST00000509538.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	3	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAGAAAGAAGTGTCAGC	184648347	True	NA	NA	False	NA	NA	NA	184649755	184657654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_184649909_184652022_184652101_184657081
transcript_110947.known	chr4	-	2494	13	FSM	ENSG00000151725.12	ENST00000281453.10	2494	13	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_3	67.6282218374022	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGACTGGATTGTATATTA	-184723780	True	NA	-4	True	ATTAAA	-15	NA	184734096	184694084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184695402_184697646_184697804_184700819_184700882_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_110948.known	chr4	-	1549	12	FSM	ENSG00000151725.12	ENST00000510146.5	1549	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	181.578114238054	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATGTGAACATAATTTT	-184723814	True	NA	-14	True	AATAAA	-14	NA	184734130	184695001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184695402_184697646_184697804_184702088_184702137_184702362_184702442_184710071_184710181_184712943_184713014_184716396_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184734015
transcript_110949.known	chr4	-	688	6	FSM	ENSG00000151725.12	ENST00000514781.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_5	263.394001450299	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAACGTCTGCCATCCC	-184733397	False	NA	0	True	AATAGA	-11	NA	184733414	184716396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_184716634_184717135_184717197_184724956_184725063_184728917_184729036_184730919_184730969_184733297
transcript_110958.known	chr4	+	4415	4	FSM	ENSG00000151729.11	ENST00000281456.11	4415	4	0	0	0	0	multi-exon	FALSE	canonical	3	2049	junction_2	53.160135440008	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGTGTCACAAATTCTTT	185137380	True	NA	NA	False	AATAAA	-14	NA	185143265	185150382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185143484_185144763_185145251_185145758_185145900_185146813
transcript_110965.known	chr4	+	1666	4	FSM	ENSG00000151729.11	ENST00000491736.1	1666	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	995.640274173135	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAACATCAATAAAGACC	185137392	True	NA	-22	True	NA	NA	NA	185143277	185147241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185143484_185144763_185145251_185145354_185145900_185146813
transcript_110967.known	chr4	-	4851	5	FSM	ENSG00000164323.15	ENST00000458385.7	4851	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	33.9448081449874	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTTGATCCTATGTT	-185198755	True	NA	-27	True	AATAAA	-15	NA	185204000	185159664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185162926_185164028_185164180_185175785_185176052_185190142_185191213_185203897
transcript_110970.known	chr4	-	903	3	NNC	ENSG00000164323.15	novel	4851	5	NA	NA	35	-233	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	117	3	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATGATCAAAAAGTGAAAA	-185198720	True	NA	-13	True	NA	NA	NA	185203965	185190375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_185191048_185191049_185191213_185203897
transcript_110972.known	chr4	-	2895	4	FSM	ENSG00000164323.15	ENST00000514798.1	2895	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.778037625742	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATGTGTAAGTAGCTCAA	-185203975	False	NA	NA	False	AATAAA	-22	NA	185204028	185169025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185170341_185175785_185176052_185190142_185191213_185203784
transcript_110974.known	chr4	-	5157	8	FSM	ENSG00000109771.16	ENST00000328559.11	5157	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.06031501455085	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACAAAGCATTGCATAACA	NA	False	NA	NA	False	AATAAA	-27	NA	185378998	185363878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185367246_185370639_185370815_185372855_185373080_185374134_185374241_185374318_185374462_185375612_185375727_185376908_185377019_185378080
transcript_110977.known	chr4	+	784	5	FSM	ENSG00000186352.9	ENST00000335174.6	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.52268050859363	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTCCGTGCAGTATT	185396573	True	NA	NA	False	ATTAAA	-16	NA	185396840	185400241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185396951_185397149_185397303_185398936_185399029_185399569_185399774_185400016
transcript_110978.known	chr4	+	519	4	FSM	ENSG00000186352.9	ENST00000506424.2	519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.1928941054479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAATACCAGTGGGAAAA	185396573	True	NA	NA	False	NA	NA	NA	185396840	185399743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185396951_185397149_185397303_185398946_185399029_185399569
transcript_110980.known	chr4	-	2361	12	FSM	ENSG00000109775.11	ENST00000264689.11	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	25.8754167132173	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAACTTAAGTCTTTTT	-185422734	True	NA	NA	False	CATAAA	-34	NA	185425964	185399536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405857_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_110981.known	chr4	-	1672	12	FSM	ENSG00000109775.11	ENST00000510755.5	1672	12	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	71.206950166863	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTAATTTTTCACATTA	-185422739	True	NA	-62	True	AATAAA	-5	NA	185425969	185400333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185400479_185403493_185403619_185405779_185405960_185407935_185408061_185408270_185408436_185413725_185413873_185415154_185415348_185415709_185415868_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_110982.known	chr4	-	565	6	FSM	ENSG00000109775.11	ENST00000502428.5	565	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	95.4463199919201	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATGAAAGGAACATC	-185422700	True	NA	NA	False	NA	NA	NA	185425930	185415283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185415348_185415709_185415816_185418440_185418508_185418586_185418771_185422484_185422564_185425865
transcript_110984.nnic	chr4	+	1426	9	NNC	ENSG00000205129.9	novel	1333	8	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.3152535990097	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	185425840	True	NA	6	True	AATAAA	-17	NA	185426233	185449826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_185426397_185427173_185427247_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_110985.nic	chr4	+	1370	8	NIC	ENSG00000205129.9	novel	1333	8	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	14.6955497914664	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	185425848	True	NA	6	True	AATAAA	-17	NA	185426241	185449826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_+_185426422_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_110988.known	chr4	-	1948	7	FSM	ENSG00000154553.16	ENST00000643009.1	1948	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.8588914885357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTATGTGTTTTAACTAT	-185534489	False	NA	NA	False	NA	NA	NA	185535422	185501877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185513556_185514338_185523361_185523447_185525019_185525172_185535341
transcript_110989.known	chr4	-	2658	7	FSM	ENSG00000154553.16	ENST00000284771.7	2658	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.54666899441312	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGTATCCAAAATACAT	-185534574	True	NA	NA	False	AATAAA	-24	NA	185535507	185500659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185502484_185504474_185504587_185506521_185506653_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_110993.known	chr4	-	2819	5	FSM	ENSG00000154553.16	ENST00000504011.5	2819	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.9902313929474	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTATAAGAGTGCCCCCA	-185534558	True	NA	NA	False	NA	NA	NA	185535491	185512093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185514338_185514702_185514891_185523361_185523447_185525019_185525172_185535341
transcript_110995.known	chr4	-	544	4	FSM	ENSG00000168491.10	ENST00000506962.3	544	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTTCAGAAAATTCTGA	-185470976	True	NA	NA	False	NA	NA	NA	185471104	185460031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185460239_185461048_185461160_185462642_185462709_185470944
transcript_110997.known	chr4	-	622	3	FSM	ENSG00000154553.16	ENST00000515261.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCATCAGAAAGAATTTGG	-185534574	True	NA	NA	False	AAAAAG	-43	NA	185535507	185523142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185523447_185525019_185525172_185535341
transcript_110998.nnic	chr4	+	786	2	NNC	ENSG00000205129.9	novel	785	5	NA	NA	-243	-9419	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	153	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	ACTAAA	-19	NA	185426005	185426891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_185426081_185426180
transcript_110999.known	chr4	+	394	2	FSM	ENSG00000249679.3	ENST00000512874.2	530	2	101	35	21	-35	multi-exon	FALSE	canonical	3	30	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGGAAGCGACGGTGG	185471282	True	NA	7	True	ATTAAA	-15	NA	185471515	185472263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185471761_185472114
transcript_111001.known	chr4	+	1333	8	FSM	ENSG00000205129.9	ENST00000378850.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	10.8364464391502	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGTTGTTGATTTATG	185425860	True	NA	6	True	AATAAA	-17	NA	185426253	185449826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_185426397_185429333_185429512_185431981_185432202_185436045_185436184_185436283_185436360_185440539_185440720_185444963_185445131_185449595
transcript_111029.nnic	chr4	+	616	3	Antisense	novelGene_ENSG00000154556.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTTGACTCTTGGCT	NA	False	NA	NA	False	ATTAAA	-15	NA	185638328	185655202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_+_185638648_185654358_185654434_185654980
transcript_11103.known	chr1	+	3195	11	NNC	ENSG00000163462.19	novel	3178	10	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	11.6314229568011	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAATCATTCCTGTGAGTT	155173776	False	NA	28	True	AATAAA	-35	NA	155173786	155184971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_155174030_155174600_155174642_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177270_155178067_155178256_155178491_155178614_155179631_155179935_155181851_155182150_155183796
transcript_111032.nnic	chr4	-	1193	3	NNC	ENSG00000154556.18	novel	598	3	NA	NA	27	27088	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAAACTTCACTAGC	-185774402	True	NA	NA	False	AAAAAG	-8	NA	185775495	185729953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_-_185730822_185734098_185734155_185775226
transcript_111034.known	chr4	-	4964	2	FSM	ENSG00000154556.18	ENST00000462661.1	4964	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGAAACGATGAAAATGC	-185812210	False	NA	NA	False	NA	NA	NA	185812239	185770978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_185775367_185811663
transcript_111057.nnic	chr4	+	1458	9	NNC	ENSG00000164344.16	novel	720	4	NA	NA	-531	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	20.8172854858649	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTAGCAAGTGTTTTCTT	186250470	False	NA	14	True	AATAAA	-15	NA	186250500	186258471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr4_+_186250541_186251218_186251329_186251486_186251650_186251748_186251862_186252016_186252186_186254587_186254764_186255991_186256088_186257225_186257366_186258020
transcript_111073.nnic	chr4	-	453	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	74.5	326	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186247266	False	NA	-1	True	ATTAAA	-22	NA	186247323	186241993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242330_186245315_186245394_186247284
transcript_111077.nnic	chr4	-	857	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	69	junction_2	47	521	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186247371	False	NA	-1	True	ATTAAA	-22	NA	186247428	186241993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242330_186245315_186245479_186247070
transcript_111079.nnic	chr4	-	559	3	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	75	junction_2	44	1240	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGTGGTCTCTTC	-186247287	False	NA	-1	True	ATTAAA	-22	NA	186247344	186241993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242330_186245315_186245479_186247284
transcript_111089.nnic	chr4	-	415	2	Antisense	novelGene_ENSG00000164344.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	129	junction_1	0	983	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTGTTTAGTGGT	-186247312	False	NA	-7	True	ATTAAA	-16	NA	186247369	186241999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr4_-_186242330_186247284
transcript_111095.known	chr4	-	1852	2	FSM	ENSG00000083857.15	ENST00000509647.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTGATGAGGGTGAGAAC	-186724906	True	NA	NA	False	NA	NA	NA	186726722	186708362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_186709846_186726353
transcript_111096.known	chr4	-	597	3	FSM	ENSG00000250590.6	ENST00000507817.2	597	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGTCAATTTTTATCAT	NA	False	NA	NA	False	AGTAAA	-18	NA	187672755	187532877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_187533204_187665761_187665839_187672561
transcript_111099.known	chr4	+	2647	4	FSM	ENSG00000179059.10	ENST00000326866.5	2647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.024973085399	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATATGCCAAGTCTGTAT	187972420	True	NA	44	True	ATTAAA	-16	NA	187995770	188005046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_187995841_187999107_187999274_187999608_187999686_188002712
transcript_1111.known	chr1	-	3145	11	FSM	ENSG00000078369.18	ENST00000610897.4	3145	11	0	0	0	0	multi-exon	TRUE	canonical	3	368	junction_10	658.790717906681	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863123	True	NA	0	True	AATAAA	-20	NA	1891117	1785284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1815755_1815863_1817836_1817876_1825396_1825500_1890819
transcript_11110.known	chr1	-	785	4	FSM	ENSG00000163463.13	ENST00000487350.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	1721	junction_1	53.1057644914582	3172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156753	True	NA	-15	True	AATAAA	-15	NA	155173238	155169407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737
transcript_111106.known	chr4	+	2480	3	FSM	ENSG00000179059.10	ENST00000509524.5	2480	3	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_2	55.5	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATATGCCAAGTCTGTA	187972420	True	NA	43	True	ATTAAA	-15	NA	187995770	188005045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_187995841_187999608_187999686_188002712
transcript_11111.known	chr1	-	578	4	FSM	ENSG00000163463.13	ENST00000471891.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	1334	junction_3	191.217735114247	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	-155156766	True	NA	-16	True	AATAAA	-14	NA	155173251	155169408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172893_155173220
transcript_111115.nic	chr4	-	2142	8	NIC	ENSG00000179046.9	novel	1998	8	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_7	52.1993822779933	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188109733	False	NA	-25	True	AATAAA	-14	NA	188109750	188091271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105588_188109242
transcript_111116.known	chr4	-	1998	8	FSM	ENSG00000179046.9	ENST00000682553.1	1998	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	56.9933759129882	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGAGCCTGATTTAATAT	-188107637	True	NA	-25	True	AATAAA	-14	NA	188109603	188091271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_188091942_188097060_188097162_188097323_188097347_188099034_188099176_188101055_188101251_188104836_188104933_188105179_188105591_188109242
transcript_11112.known	chr1	-	414	3	FSM	ENSG00000163463.13	ENST00000482246.5	414	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	667	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTGTGAGTTGTGATAT	-155156783	True	NA	-16	True	AATAAA	-14	NA	155173268	155169408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169620_155172737_155172893_155173220
transcript_111125.known	chr4	-	536	2	FSM	ENSG00000179046.9	ENST00000394461.2	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAAGCATACAGTCCAGT	-188107637	True	NA	NA	False	NA	NA	NA	188109603	188105412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_-_188105588_188109242
transcript_11113.known	chr1	-	598	5	FSM	ENSG00000163463.13	ENST00000491084.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	740.438046024109	2183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155173462	False	NA	-15	True	AATAAA	-15	NA	155173475	155169407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172564_155172629_155172737_155172893_155173316
transcript_111132.known	chr4	+	700	5	FSM	ENSG00000249378.7	ENST00000662888.1	700	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATTTCTCATACTACTT	NA	False	NA	NA	False	AATAAA	-24	NA	188455553	188486429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188476697_188476757_188485778_188485866_188486095
transcript_111133.known	chr4	+	443	4	FSM	ENSG00000249378.7	ENST00000503458.7	464	4	15	6	0	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATAAGGTTTGATGTGCTA	NA	False	NA	NA	False	ATTAAA	-25	NA	188455558	188601908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_188455675_188456663_188456763_188485778_188485866_188601767
transcript_111136.known	chr4	+	978	9	FSM	ENSG00000109536.12	ENST00000226798.9	978	9	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_8	24.3964649078509	1962	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTACAGAGTTCTTGA	NA	False	NA	42	True	AATAAA	-15	NA	189940871	189963192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr4_+_189941072_189943201_189943273_189952161_189952288_189953067_189953126_189955036_189955152_189957397_189957503_189960747_189960840_189961821_189961933_189963092
transcript_11114.known	chr1	-	463	5	FSM	ENSG00000163463.13	ENST00000463527.5	463	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	883.125415781926	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155172764	False	187	-15	True	AATAAA	-15	NA	155172777	155169407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169790_155169858_155172350_155172490_155172564_155172629_155172737
transcript_111147.nic	chr5	+	2809	11	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-59	32856	-59	0	5prime_fragment	TRUE	canonical	3	192	junction_1	33.9493740737587	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	86737	True	NA	18	True	AATAAA	-29	NA	92108	157110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_92277_113250_113449_139482_140717_143046_143257_143379_143504_144826_144921_151512_151600_154874_154992_155344_155444_156070_156211_156772
transcript_11115.known	chr1	-	477	5	FSM	ENSG00000163463.13	ENST00000497317.5	477	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	738.411936184675	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTGAGTTGTGATATG	-155156769	True	NA	-15	True	AATAAA	-15	NA	155173254	155169407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155169561_155169786_155169858_155172564_155172629_155172737_155172893_155173220
transcript_11116.known	chr1	+	1864	9	FSM	ENSG00000163462.19	ENST00000368385.8	1864	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.68907359849138	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGGCCAGGCAAGGT	155173145	True	NA	NA	False	AATAAA	-14	NA	155173877	155180621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155174030_155175385_155175648_155175887_155176232_155176931_155177076_155177194_155177291_155178001_155178256_155178491_155178614_155179631_155179935_155180434
transcript_111161.nnic	chr5	+	1060	6	NIC	ENSG00000153404.15	novel	12591	20	NA	NA	-59	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	105.020759852517	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGTGGAGAAAAAAAATTT	86737	True	NA	18	True	AATAAA	-29	NA	92108	157110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_92277_113250_113449_154874_154992_155344_155444_156070_156211_156772
transcript_111166.nic	chr5	+	626	2	ISM	ENSG00000153404.15	ENST00000637938.2	12591	20	-59	76258	-59	-43402	5prime_fragment	FALSE	canonical	3	192	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATAAGTCATTCTTCAG	86737	True	NA	NA	False	AATAAA	-25	NA	92108	113708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_92277_113250
transcript_111169.nnic	chr5	-	1143	2	NIC	ENSG00000164366.4	novel	9283	3	NA	NA	-80	916	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATTTTCTGTCTGTTTCA	-216524	True	NA	-4	True	AATACA	-20	NA	218233	204956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_205959_218092
transcript_11117.known	chr1	-	1107	7	FSM	ENSG00000185499.17	ENST00000338684.9	1107	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	5.30461015427985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGATCTTTCATCTG	-155192843	False	90	-2	True	AATAAA	-21	NA	155192915	155185825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155186210_155187224_155187375_155187454_155187577_155187721_155187859_155188007_155188064_155192182_155192311_155192785
transcript_111170.known	chr5	-	9283	3	FSM	ENSG00000164366.4	ENST00000296824.4	9283	3	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	2.5	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTTACTTCTTTT	-216444	True	NA	NA	False	NA	NA	NA	218153	196867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_205959_216728_216860_218092
transcript_111172.nnic	chr5	+	837	3	NIC	ENSG00000249915.9	novel	931	4	NA	NA	-16	0	intron_retention	TRUE	canonical	3	23	junction_2	474	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262887	True	NA	18	True	AATAAA	-18	NA	271604	314974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_271822_272710_272773_314416
transcript_111176.known	chr5	+	2693	15	FSM	ENSG00000073578.18	ENST00000264932.11	2693	15	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_11	54.0355136432872	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTGGCCTTGTAGTT	200401	True	NA	NA	False	NA	NA	NA	218319	257082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_11118.known	chr1	-	572	2	FSM	ENSG00000185499.17	ENST00000620770.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCCGGACACCAGGCCGG	-155192837	False	90	NA	False	NA	NA	NA	155192909	155191862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155192311_155192785
transcript_111182.known	chr5	+	2067	13	FSM	ENSG00000073578.18	ENST00000504309.5	2067	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_11	228.47980399443	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	200384	True	NA	NA	False	AATAAA	-16	NA	218302	256682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_235143_235340_236427_236600_240357_240477_254392_254507_256333
transcript_11119.known	chr1	-	3145	23	FSM	ENSG00000169231.13	ENST00000368378.7	3145	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3.40181040764866	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	-155207753	True	NA	0	True	CATAAA	-19	NA	155207897	155195587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155195900_155195986_155196127_155197040_155197214_155197462_155197660_155197879_155197929_155198041_155198221_155198408_155198603_155199803_155199857_155199994_155200114_155200450_155200611_155200896_155201005_155201093_155201205_155201416_155201570_155201956_155202035_155202260_155202402_155202811_155202961_155203085_155203138_155203222_155203306_155203512_155203540_155204854_155204958_155205059_155205317_155206199_155206407_155207797
transcript_111205.known	chr5	+	1073	5	NIC	ENSG00000249915.9	novel	1050	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	31	junction_1	333.022803273289	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_271822_304176_304222_306601_306761_311292_311403_314416
transcript_111213.nnic	chr5	+	1015	5	NNC	ENSG00000249915.9	novel	878	4	NA	NA	-3704	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	337.663293829815	707	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	NA	False	NA	18	True	AATAAA	-18	NA	302976	314974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_303120_304176_304222_306601_306761_311292_311403_314416
transcript_111222.known	chr5	-	522	2	FSM	ENSG00000248925.2	ENST00000512642.2	1075	2	0	553	0	-553	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGTCTCTTCATAAAGT	NA	False	NA	NA	False	NA	NA	NA	271516	269857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_270208_271344
transcript_111224.known	chr5	+	1952	13	NNC	ENSG00000073578.18	novel	2693	15	NA	NA	-62	15	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	245.068853703516	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCCATTTGAAATATTTT	NA	False	NA	NA	False	AATAAA	-31	NA	218240	256697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_218419_223481_223569_224359_224522_225418_225487_230920_231001_233476_233646_235143_235340_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333
transcript_111225.known	chr5	+	3665	24	FSM	ENSG00000286001.1	ENST00000651543.1	3665	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	400.811313319233	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGGAATGTTAGACGTGTG	200379	True	NA	-1	True	AAAAAG	-41	NA	218297	314955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_218419_223481_223569_224359_224522_225418_225563_225882_226048_228184_228334_230875_231001_233476_233646_236427_236600_240357_240477_250991_251104_251337_251469_254392_254507_256333_256456_263700_263815_264322_264386_270734_270855_271410_271822_272710_272773_304176_304222_306601_306761_311292_311403_313700_313851_314416
transcript_111226.known	chr5	+	1156	3	FSM	ENSG00000249915.9	ENST00000509581.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	455.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	262939	True	NA	13	True	AATAAA	-14	NA	271656	276940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_276011
transcript_111227.known	chr5	+	931	4	FSM	ENSG00000249915.9	ENST00000618970.4	931	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_2	407.840110282885	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_311292_311403_314416
transcript_111228.known	chr5	+	1088	6	FSM	ENSG00000249915.9	ENST00000507528.5	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	313.918205907208	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGGTCTGCCTTCAGCT	262939	True	NA	13	True	AATAAA	-13	NA	271656	314969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_304176_304222_306601_306755_311292_311403_314416
transcript_111229.known	chr5	+	672	4	FSM	ENSG00000249915.9	ENST00000505221.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	414.753742197303	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTCTCTGGTTCTATA	262929	True	NA	6	True	NA	NA	NA	271646	314806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271822_272710_272773_304176_304222_314416
transcript_111230.known	chr5	+	486	4	FSM	ENSG00000249915.9	ENST00000507473.1	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	391.918642350963	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATAGTAGCTGTATCGTT	272692	True	NA	NA	False	NA	NA	NA	272711	314686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_272773_304176_304222_311292_311403_314416
transcript_111231.known	chr5	+	1050	7	FSM	ENSG00000249915.9	ENST00000614778.4	1050	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	330.856296432286	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCCTTCAGCTTTTCA	262903	True	NA	18	True	AATAAA	-18	NA	271620	314974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_271691_271775_271822_272710_272773_304176_304222_306601_306761_311292_311403_314416
transcript_111233.known	chr5	-	1663	1	FSM	ENSG00000221990.5	ENST00000623673.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTTATTGGCTGGGCGC	-442673	False	NA	NA	False	NA	NA	NA	443160	441497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_441500_443200
transcript_111234.known	chr5	+	2801	13	FSM	ENSG00000180104.16	ENST00000512944.6	2801	13	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	35.9753001686188	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAACGCCATGCATTCTC	441249	True	NA	11	True	ATTAAA	-24	NA	443175	467290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_443291_446149_446350_447532_447753_453369_454052_456888_457007_457899_458026_459358_459460_461959_462071_462156_462308_464289_464413_465110_465273_465717_465846_466726
transcript_111238.known	chr5	+	2366	12	FSM	ENSG00000112877.8	ENST00000264935.6	2366	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_9	18.0929647073338	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	609830	True	NA	8	True	AATAAA	-21	NA	612339	653553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_612444_618989_619118_620068_620262_624470_624580_633768_633948_635371_635585_637516_637819_639088_639225_640407_640605_644298_644426_647804_647917_652987
transcript_111245.nnic	chr5	+	1687	4	NNC	ENSG00000112877.8	novel	656	3	NA	NA	-1350	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	67.8282143850674	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTTTTTCAGTGGCTG	642773	False	NA	8	True	AATAAA	-21	NA	642787	653553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_643670_644298_644426_647804_647917_652987
transcript_111249.nic	chr5	-	214	2	ISM	ENSG00000028310.18	ENST00000466684.5	1417	11	-12	15595	-12	-2661	5prime_fragment	FALSE	canonical	2	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGAAGTCCG	-887484	False	NA	-46	True	AAGAAA	-8	NA	892571	891703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_891855_892508
transcript_111250.nic	chr5	-	295	2	ISM	ENSG00000028310.18	ENST00000495265.5	2843	16	51	27963	51	-2661	5prime_fragment	FALSE	canonical	3	147	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAAGAAGAAGTCCG	-887662	True	NA	-46	True	AAGAAA	-8	NA	892749	891703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_891855_892605
transcript_111251.known	chr5	-	3170	17	FSM	ENSG00000028310.18	ENST00000489816.5	3170	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	86.5588446881657	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGTTTACTGAGTGCCC	-887435	False	5087	-38	True	CATAAA	-13	NA	892522	863744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_864569_865413_865582_869244_869395_870472_870576_871525_871565_876100_876213_878354_878488_879793_879890_881106_881183_883937_884071_886591_886708_887360_887472_889020_889166_889586_889767_891154_891288_891639_891855_892086
transcript_111256.known	chr5	+	2431	13	FSM	ENSG00000071539.14	ENST00000166345.8	2431	13	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_7	35.4185293627816	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAAGCCTGATTTATGGT	885323	True	NA	81	True	ACTAAA	-23	NA	892883	918120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354_908462_911842_911997_914464_914578_915903_915974_917007
transcript_111262.known	chr5	+	1452	9	FSM	ENSG00000071539.14	ENST00000512024.5	1452	9	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_7	42.5395036995027	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGACAGAGCAAGACTCC	885323	True	NA	NA	False	NA	NA	NA	892883	908932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_893091_894786_894953_896664_896795_900493_900550_901340_901432_904147_904221_907129_907194_907987_908075_908354
transcript_111264.known	chr5	-	5300	24	FSM	ENSG00000113504.21	ENST00000264930.10	5300	24	0	0	0	0	multi-exon	TRUE	non_canonical	3	65	junction_21	13.9832467948712	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACGTTGAAGAATCTCTTG	NA	False	NA	-11	True	AATAAA	-17	NA	1112063	1050383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1052452_1053348_1053483_1057470_1057650_1060343_1060452_1063843_1063976_1064082_1064253_1065282_1065479_1073632_1073802_1074566_1074672_1075370_1075491_1076137_1076237_1076693_1076813_1077832_1078008_1078700_1078759_1079397_1079497_1081576_1081745_1083744_1083957_1085231_1085474_1086902_1087034_1088305_1088361_1088981_1089129_1093532_1093656_1094153_1094249_1111867
transcript_111267.known	chr5	-	2492	17	FSM	ENSG00000049656.14	ENST00000320895.10	2492	17	0	0	0	0	multi-exon	FALSE	canonical	3	1030	junction_10	83.1026990762033	468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCAAGCCTTTGAGTCA	NA	False	NA	-15	True	ATTAAA	-20	NA	1345099	1317751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1318454_1320615_1320732_1321634_1321680_1321763_1321820_1322876_1322912_1323786_1323870_1324762_1324814_1325750_1325817_1330279_1330384_1331798_1331884_1334288_1334384_1335056_1335175_1337903_1337983_1338859_1339006_1341670_1341861_1344350_1344452_1344679
transcript_111269.known	chr5	-	3945	14	FSM	ENSG00000153395.10	ENST00000283415.4	3945	14	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	61.8664337205708	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTTGTTTTGTGTGGTT	-1514031	True	NA	-4	True	AGTAAA	-23	NA	1523960	1461426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1463836_1466748_1466891_1470825_1470925_1473956_1474111_1474559_1474686_1477403_1477487_1479620_1479676_1480941_1480977_1483427_1483487_1488390_1488452_1489745_1489859_1494699_1494915_1501460_1501604_1523709
transcript_111274.nic	chr5	-	1374	8	FSM	ENSG00000185986.13	ENST00000689786.1	1332	8	-43	1	-40	-1	multi-exon	FALSE	canonical	3	20	junction_4	41.5063309653369	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591313	True	NA	NA	False	AATAAA	-16	NA	1594544	1571956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_111276.nnic	chr5	-	1166	7	NIC	ENSG00000185986.13	novel	1332	8	NA	NA	-40	-1	combination_of_known_splicesites	TRUE	canonical	3	27	junction_3	40.7703596037884	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591313	True	NA	NA	False	AATAAA	-16	NA	1594544	1571956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_1572287_1574181_1574296_1576178_1576310_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_111277.nnic	chr5	-	1016	6	FSM	ENSG00000185986.13	ENST00000684972.1	1127	6	107	4	-40	-1	multi-exon	FALSE	canonical	2	5	junction_3	49.5758005482514	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTATTTCCAAATC	-1591313	True	NA	NA	False	AATAAA	-16	NA	1594544	1571956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1572287_1574181_1574296_1576178_1576310_1589246_1589366_1593112_1593285_1594394
transcript_111283.known	chr5	-	736	3	FSM	ENSG00000185986.13	ENST00000436493.2	736	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	46.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCAGTCTCTGCTAGT	-1591389	True	NA	NA	False	NA	NA	NA	1594620	1589027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1589366_1593112_1593285_1594394
transcript_111286.known	chr5	-	2585	9	FSM	ENSG00000185986.13	ENST00000652578.1	2585	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	44.3337836756575	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTCTCTATACTTTG	-1591245	True	NA	-15	True	NA	NA	NA	1594476	1567494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1568999_1572181_1572287_1574181_1574296_1576178_1576310_1579276_1579485_1584983_1585134_1589246_1589366_1593112_1593285_1594394
transcript_111288.known	chr5	-	1135	5	FSM	ENSG00000188002.11	ENST00000343123.5	1436	5	0	301	0	-301	multi-exon	FALSE	canonical	2	14	junction_1	46.0563513535321	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGATTGGGCTTCTGTTT	-1632245	True	NA	NA	False	NA	NA	NA	1633984	1629000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1629631_1630408_1630567_1632643_1632752_1632844_1632907_1633807
transcript_111292.nic	chr5	-	1552	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	28	4	0	0	multi-exon	FALSE	canonical	3	70	junction_1	29	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTTTGTTTGTTT	-1632242	True	NA	-5	True	TTTAAA	-41	NA	1633981	1628515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_111294.nic	chr5	-	1370	3	FSM	ENSG00000188002.11	ENST00000690916.1	1584	3	28	186	0	2	multi-exon	FALSE	canonical	3	70	junction_1	29	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTTGATCCCTTTT	-1632242	True	NA	-20	True	AATAAA	-14	NA	1633981	1628697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1629631_1632643_1632907_1633807
transcript_111299.nnic	chr5	-	1188	3	Antisense	novelGene_ENSG00000260066.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	3	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAATGGCAGCT	-1725224	True	NA	NA	False	ACTAAA	-31	NA	1725355	1722249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_1723050_1723647_1723800_1725119
transcript_111301.known	chr5	-	595	2	FSM	ENSG00000171421.13	ENST00000505818.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTAGTTCATTCATTCTC	-1801340	False	NA	-5	True	ATTAAA	-16	NA	1801366	1798385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1801333
transcript_111302.known	chr5	-	793	2	FSM	ENSG00000171421.13	ENST00000510999.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCCCCCGTGGCTGTGG	-1799724	False	NA	NA	False	NA	NA	NA	1799750	1798828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799076
transcript_111303.known	chr5	-	686	2	FSM	ENSG00000171421.13	ENST00000508987.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	4472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTAGTTCATTCATTCT	-1799869	False	NA	-6	True	ATTAAA	-15	NA	1799895	1798386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799770
transcript_111305.known	chr5	-	587	2	FSM	ENSG00000171421.13	ENST00000382647.7	587	2	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	0	2414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAGCTTAGTTCATTCAT	-1789344	True	NA	-9	True	ATTAAA	-12	NA	1799838	1798389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799809
transcript_111306.known	chr5	-	609	2	FSM	ENSG00000171421.13	ENST00000505059.7	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	3533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAGTTCATTCATTCTCT	-1789343	True	NA	-4	True	ATTAAA	-17	NA	1799837	1798384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_1798948_1799791
transcript_111333.known	chr5	+	518	4	FSM	ENSG00000145494.12	ENST00000274137.10	518	4	0	0	0	0	multi-exon	FALSE	canonical	3	2892	junction_3	89.2785901919753	43556	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTAAGTTTGTTTCT	1769120	True	NA	20	True	AATAAA	-22	NA	1801406	1816048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_1801550_1802320_1802375_1814338_1814462_1815850
transcript_111334.nnic	chr5	+	399	2	FSM	ENSG00000249116.2	ENST00000692531.1	511	2	3	109	3	4	multi-exon	FALSE	canonical	3	26	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTCTGAATTCTGT	1883266	False	NA	13	True	TATAAA	-24	NA	1883317	1884649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_1883547_1884479
transcript_111335.known	chr5	+	425	2	FSM	ENSG00000249116.2	ENST00000506335.2	432	2	2	5	2	4	multi-exon	FALSE	canonical	2	4	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTTTCTGAATTCTGT	1883933	True	NA	13	True	TATAAA	-24	NA	1883965	1884649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_1884221_1884479
transcript_111336.known	chr5	-	2630	5	FSM	ENSG00000170561.13	ENST00000382611.10	2630	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	37.4391172438667	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTTATATTTATTTCT	-2748069	True	NA	-8	True	AATAAA	-17	NA	2751662	2745844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_2746787_2747540_2747617_2748344_2749053_2749381_2749788_2751164
transcript_111337.known	chr5	+	1441	3	FSM	ENSG00000186493.14	ENST00000515640.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCGACTCTTACTAC	2751790	True	NA	9	True	AATAAA	-22	NA	2752245	2754373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_2752465_2752621_2752755_2753284
transcript_111340.nnic	chr5	-	1094	3	NNC	ENSG00000248973.3	novel	721	6	NA	NA	233875	-68727	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTGTGTTTTTGTATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	4615925	4520656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_4521146_4522264_4522368_4615423
transcript_111342.known	chr5	-	432	2	FSM	ENSG00000250529.1	ENST00000507950.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAGTAGTCTTTAAAAAT	-5078301	True	NA	NA	False	AATAAA	-14	NA	5078311	5069191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_5069516_5078203
transcript_111344.known	chr5	-	1633	4	FSM	ENSG00000250579.3	ENST00000512155.3	1684	4	34	17	34	0	multi-exon	TRUE	canonical	3	51	junction_3	29.9777695412228	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5138955	True	NA	-39	True	AATAAA	-4	NA	5140119	5132100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_5133233_5133636_5133771_5133867_5134071_5139955
transcript_111345.nnic	chr5	-	1601	4	NNC	ENSG00000250579.3	novel	1628	4	NA	NA	-616	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	48.7259912389909	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5140754	False	NA	-39	True	AATAAA	-4	NA	5140769	5132100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_5133233_5133636_5133771_5133867_5134071_5140637
transcript_111346.nnic	chr5	-	1478	3	NIC	ENSG00000250579.3	novel	5854	3	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	58.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTAAAATGTGGAATTA	-5139003	True	NA	-39	True	AATAAA	-4	NA	5140167	5132100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_5133233_5133636_5133771_5139955
transcript_111351.known	chr5	-	1912	3	FSM	ENSG00000286753.2	ENST00000669435.1	1912	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTTTCTCCCTCTCT	-5422095	False	NA	1	True	AATAAA	-27	NA	5422116	5390095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_5391204_5420750_5420841_5421402
transcript_111357.known	chr5	-	1101	4	FSM	ENSG00000133398.4	ENST00000255764.4	1101	4	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_3	6.94422221866655	2925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTACTTTCCCAGAGGGT	-6372229	True	NA	0	True	AATATA	-27	NA	6378547	6371873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6372602_6374323_6374427_6377165_6377250_6378361
transcript_111360.known	chr5	-	648	2	FSM	ENSG00000133398.4	ENST00000504058.1	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAAAGTCCTATGAGGGC	-6372253	True	NA	NA	False	NA	NA	NA	6378571	6376811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6377250_6378361
transcript_111362.known	chr5	-	3056	19	FSM	ENSG00000037474.15	ENST00000264670.11	3056	19	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_17	62.5707500788675	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTGTGATTCCTGTTT	-6614550	True	NA	36	True	AATAAA	-15	NA	6633044	6599238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6631872_6631978_6632598_6632757_6632883
transcript_111363.known	chr5	-	2619	18	FSM	ENSG00000037474.15	ENST00000506139.5	2619	18	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_16	177.02358453316	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTGCAGTATTTTTTAAA	-6614548	True	NA	NA	False	NA	NA	NA	6633042	6599568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_6600233_6602460_6602501_6604137_6604277_6604604_6604686_6605272_6605409_6606819_6606913_6607199_6607385_6609825_6609923_6610954_6611086_6611724_6611799_6616726_6616858_6617949_6618025_6620105_6620299_6622015_6622101_6623213_6623286_6625563_6625670_6632598_6632757_6632883
transcript_111364.known	chr5	+	7035	5	FSM	ENSG00000145545.12	ENST00000274192.7	7035	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	10.8282039138539	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGTTTTGCTCATTGGAT	6630097	True	NA	35	True	ATTAAA	-30	NA	6633439	6674386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_6633870_6651841_6652009_6656077_6656180_6662815_6662967_6668201
transcript_111369.nnic	chr5	+	2206	5	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-8834	-3022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.9032558571174	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	7263914	False	NA	7	True	AATAAA	-19	NA	7263957	7273901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_7264177_7266032_7266135_7271523_7271629_7271719_7272921_7273322
transcript_111379.nnic	chr5	+	1176	4	NNC	ENSG00000285689.1	novel	536	3	NA	NA	-9014	-3022	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11.7851130197758	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	7263473	True	NA	7	True	AATAAA	-19	NA	7263777	7273901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_7264177_7266032_7266135_7272824_7272921_7273322
transcript_111385.nnic	chr5	+	1080	3	Intergenic	novelGene_48	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTGTCTTGTCCCCTG	7263473	True	NA	7	True	AATAAA	-19	NA	7263777	7273901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_7264177_7266032_7266135_7273322
transcript_111388.nic	chr5	+	750	3	ISM	ENSG00000251250.3	ENST00000650000.1	860	4	-289	30115	-289	143	5prime_fragment	FALSE	canonical	3	24	junction_2	5.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACCGTAAAACTTGCCAT	NA	False	NA	NA	False	ATTAAA	-28	NA	7289601	7296488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_7289975_7290791_7290895_7296214
transcript_111390.known	chr5	-	407	3	FSM	ENSG00000249638.1	ENST00000504765.1	407	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGTTGTAAATACAGT	NA	False	NA	NA	False	AGTAAA	-20	NA	7364531	7362978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7363116_7363502_7363585_7364343
transcript_111394.nnic	chr5	+	737	4	NNC	ENSG00000078295.17	novel	600	4	NA	NA	-1539	-31823	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_1	330.657257930659	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTGTCGTTCATTCA	7393565	True	NA	9	True	ATTAAA	-20	NA	7394598	7626383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_7394759_7414572_7414771_7520737_7520900_7626166
transcript_111399.nnic	chr5	+	2375	3	NNC	ENSG00000078295.17	novel	571	3	NA	NA	-1539	132	intron_retention	FALSE	canonical	3	82	junction_1	369	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	7393565	True	NA	NA	False	NA	NA	NA	7394598	7522754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_7394759_7414572_7414771_7520737
transcript_111403.known	chr5	-	2028	3	FSM	ENSG00000215217.7	ENST00000399810.7	2028	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCATTTACTTTCAG	-7851040	True	NA	NA	False	AATAAA	-17	NA	7851133	7830377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7832030_7835381_7835499_7850874
transcript_111405.known	chr5	+	3245	15	FSM	ENSG00000124275.15	ENST00000440940.7	3245	15	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	50.6071806633592	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCTTAAAACTTGGTAAG	7865080	True	NA	16	True	AATAAA	-19	NA	7869147	7901113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869216_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_111409.known	chr5	+	3274	15	FSM	ENSG00000124275.15	ENST00000264668.6	3274	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	64.9036963193805	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	NA	False	NA	27	True	AATAAA	-30	NA	7869103	7901124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869190_7870769_7870924_7873372_7873527_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_111410.nic	chr5	+	3114	14	NIC	ENSG00000124275.15	novel	3076	14	NA	NA	-12	0	intron_retention	FALSE	canonical	3	135	junction_1	40.527585754651	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865068	True	NA	27	True	AATAAA	-30	NA	7869135	7901124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_111412.known	chr5	+	3076	14	FSM	ENSG00000124275.15	ENST00000511461.5	3076	14	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	59.8215294406235	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTAAGTTTTTGTGGCT	7865080	True	NA	27	True	AATAAA	-30	NA	7869147	7901124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869190_7870769_7870924_7875257_7875376_7877943_7878323_7883154_7883278_7885700_7885855_7886614_7886704_7889094_7889276_7891371_7891415_7892726_7892914_7895733_7895853_7896863_7896957_7897064_7897248_7899913
transcript_111423.nic	chr5	-	2364	7	NIC	ENSG00000124279.12	novel	2431	7	NA	NA	-16	0	intron_retention	FALSE	canonical	3	34	junction_6	40.2012299424892	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867772	True	NA	-9	True	AATAAA	-16	NA	7869053	7859158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868108_7868978
transcript_111424.known	chr5	-	2431	7	FSM	ENSG00000124279.12	ENST00000264669.10	2431	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	35.0460015154685	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATAGTTATCTGCT	-7867750	True	NA	-9	True	AATAAA	-16	NA	7869031	7859158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7866645_7868197_7868978
transcript_111428.known	chr5	-	637	6	FSM	ENSG00000124279.12	ENST00000282110.8	637	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	52.5067614693574	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATTAAAAGAAAAATATAAT	-7867729	True	NA	NA	False	NA	NA	NA	7869010	7859380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861653_7862822_7862998_7865897_7865984_7868978
transcript_111429.known	chr5	-	819	6	FSM	ENSG00000124279.12	ENST00000513658.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	65.2	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGACTGGTGATCTGA	-7867745	True	NA	NA	False	ATTAAA	-39	NA	7869026	7859335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_7859540_7861148_7861264_7861582_7861774_7862822_7862998_7865897_7865984_7868978
transcript_11143.known	chr1	+	923	4	FSM	ENSG00000231064.8	ENST00000447623.3	1156	4	7	226	3	71	multi-exon	FALSE	canonical	0	0	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCCCTATTTCACAGA	155194761	True	NA	NA	False	NA	NA	NA	155195003	155200346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155195369_155196850_155197018_155198402_155198619_155200171
transcript_111433.known	chr5	+	546	4	FSM	ENSG00000124275.15	ENST00000510279.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	46.6499970227461	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGGTTTTGAAGCAA	7865080	True	NA	NA	False	AAGAAA	-3	NA	7869147	7878149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869216_7870769_7870924_7875257_7875376_7877943
transcript_111436.known	chr5	+	478	3	FSM	ENSG00000124275.15	ENST00000514220.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCCCACTCTCACAAGC	7865080	True	NA	NA	False	NA	NA	NA	7869147	7878235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_7869216_7875257_7875376_7877943
transcript_111438.known	chr5	+	3239	2	FSM	ENSG00000247516.8	ENST00000606459.1	3239	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	1348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTCCTTTTCAGTTGTT	8456805	True	NA	NA	False	AATAAA	-15	NA	8457690	8463095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_8457767_8459932
transcript_111440.known	chr5	+	1799	3	FSM	ENSG00000250786.3	ENST00000508179.2	1919	3	4	116	4	-116	multi-exon	FALSE	canonical	3	40	junction_2	28	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAATGTCCTCTCTATTC	9545114	True	NA	NA	False	AAAAAG	-19	NA	9546199	9550609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_9546531_9548989_9549150_9549301
transcript_111443.known	chr5	+	842	2	FSM	ENSG00000250786.3	ENST00000655411.1	436	2	5	-411	5	411	multi-exon	FALSE	canonical	3	96	junction_1	0	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAACGTCTTTAGGGTTCT	9545204	True	NA	NA	False	NA	NA	NA	9546289	9549590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_9546531_9548989
transcript_111449.known	chr5	-	2651	5	FSM	ENSG00000150756.14	ENST00000511437.6	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	12.3161479367536	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCCAGCCTCAGGTATGT	-10248902	True	NA	-3	True	ATTAAA	-18	NA	10249888	10225506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239066_10239357_10249857
transcript_11145.known	chr1	-	768	2	FSM	ENSG00000169231.13	ENST00000498500.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTGCAACTGCTTATTT	NA	False	NA	0	True	CATAAA	-19	NA	155196442	155195587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155195900_155195986
transcript_111451.known	chr5	-	534	5	FSM	ENSG00000150756.14	ENST00000510052.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	18.417043736713	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTCCCACATTGGACTC	-10248902	True	NA	NA	False	NA	NA	NA	10249888	10227579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10235210_10235262_10236521_10236616_10239066_10239357_10249857
transcript_11146.known	chr1	+	1085	8	FSM	ENSG00000173171.15	ENST00000609421.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_3	31.0240196608751	4123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCTCAAACATTTTCTCC	155202246	True	NA	NA	False	AATAAA	-16	NA	155209246	155213824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155210628_155212126_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_111463.known	chr5	-	571	4	FSM	ENSG00000150756.14	ENST00000504390.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19.6015872373189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACGTCACGGGGGAGGG	-10248899	True	NA	NA	False	NA	NA	NA	10249885	10227557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10236477_10236616_10239041_10239357_10249857
transcript_111464.known	chr5	-	1160	4	FSM	ENSG00000150756.14	ENST00000510047.5	1160	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	18.1903515328563	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAAATAATTTGTTCC	-10249885	False	NA	NA	False	NA	NA	NA	10249897	10226955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10236477_10236616_10239066_10239357_10249857
transcript_11147.known	chr1	+	2579	7	FSM	ENSG00000173171.15	ENST00000481771.5	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_1	25.1241362482817	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTCAAACATTTTCTC	155202250	True	NA	NA	False	AATAAA	-15	NA	155209250	155213823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155209333_155210345_155210416_155210547_155212220_155212384_155212568_155212693_155212771_155213236_155213392_155213483
transcript_111470.known	chr5	-	789	3	FSM	ENSG00000150756.14	ENST00000508553.1	789	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTGCCTGTGTGAG	-10248902	True	NA	NA	False	TATAAA	-28	NA	10249888	10236147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10236616_10239066_10239357_10249857
transcript_111475.known	chr5	-	1928	6	FSM	ENSG00000150756.14	ENST00000280330.12	1928	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.1283421945948	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGATCATTTTCATTTA	-10248910	True	NA	-26	True	TATAAA	-9	NA	10249896	10226329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10227648_10235210_10235262_10236477_10236616_10239041_10239357_10244433_10244501_10249857
transcript_11148.known	chr1	-	1873	11	FSM	ENSG00000160766.15	ENST00000368374.5	1873	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	19.3235607484749	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155227340	False	NA	NA	False	NA	NA	NA	155227422	155213824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155214474_155214567_155214685_155215053_155215163_155215562_155215652_155215761_155215788_155216383_155216622_155216856_155217030_155217239_155217374_155217963_155218050_155224876_155225088_155227381
transcript_111482.known	chr5	+	3293	11	FSM	ENSG00000150753.12	ENST00000280326.9	3293	11	0	0	0	0	multi-exon	FALSE	canonical	3	4165	junction_6	242.619063554371	4936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTATTTTTCACGTT	10190751	True	NA	15	True	AATAAA	-15	NA	10250279	10266389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10250446_10254144_10254206_10254673_10254839_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_111483.known	chr5	+	1728	10	FSM	ENSG00000150753.12	ENST00000515390.5	1728	10	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	1323.84650932308	635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCACTTGTTCAAAGCT	10190687	True	NA	31	True	AATAAA	-21	NA	10250215	10264925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10250446_10254144_10254206_10255954_10256154_10258110_10258304_10258385_10258536_10260791_10260912_10261559_10261746_10262480_10262619_10263133_10263315_10264655
transcript_111486.known	chr5	-	3893	6	FSM	ENSG00000164237.9	ENST00000296658.4	3893	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	21.7678662252413	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAGTGAAATTAATTTTA	-10304084	True	NA	NA	False	ATTAAA	-14	NA	10307902	10277594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10280633_10282196_10282289_10286353_10286497_10288421_10288530_10290547_10290782_10307624
transcript_111490.known	chr5	-	901	4	FSM	ENSG00000164237.9	ENST00000506821.1	901	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	8.49836585598797	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTCACCGGGAGTCAAG	-10304041	True	NA	NA	False	AATAGA	-30	NA	10307859	10286172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10286497_10288421_10288530_10290547_10290782_10307624
transcript_111492.known	chr5	-	901	1	FSM	ENSG00000259802.1	ENST00000561606.1	901	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCGCTTGACTAATGTTA	-10353190	True	NA	-2	True	AATAAA	-29	NA	10353601	10352700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_10352700_10353600
transcript_111493.known	chr5	+	9641	26	FSM	ENSG00000145495.16	ENST00000274140.10	9641	26	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	29.1516311722003	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTTTGACAAGATGCTT	10353521	True	NA	NA	False	AATAAA	-17	NA	10353694	10440388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_111495.known	chr5	+	4734	25	FSM	ENSG00000145495.16	ENST00000511802.5	4734	25	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	28.6407040862398	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTACTGCCTGATTTTT	10351664	True	NA	4	True	NA	NA	NA	10353714	10434285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799_10381944_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_111496.known	chr5	+	3062	25	FSM	ENSG00000145495.16	ENST00000449913.6	3062	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	42.1514918346776	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTATATTAATTTATT	10351652	True	NA	-11	True	ATTAAA	-28	NA	10353702	10433961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10353918_10377797_10377895_10378758_10378833_10386993_10387067_10390331_10390501_10391541_10391732_10394081_10394144_10394752_10394786_10397292_10397345_10400783_10400843_10402058_10402140_10402383_10402453_10402532_10402608_10403406_10403542_10405557_10405678_10407101_10407203_10410138_10410277_10411332_10411538_10414432_10414503_10415487_10415670_10417269_10417405_10423734_10423825_10426389_10426523_10429892_10430029_10433593
transcript_1115.known	chr1	-	3048	10	FSM	ENSG00000078369.18	ENST00000615252.4	3048	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	817.886043557972	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGGTGATTATTTA	-1863123	True	NA	0	True	AATAAA	-20	NA	1891117	1785284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1787054_1787321_1787438_1789052_1789270_1790394_1790597_1793244_1793312_1804418_1804582_1806474_1806539_1825396_1825500_1839189_1839239_1890819
transcript_111503.nic	chr5	+	1099	4	ISM	ENSG00000145495.16	ENST00000511802.5	4734	25	-40	51801	-20	-7888	5prime_fragment	FALSE	canonical	3	115	junction_1	29.4882274061286	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGCAAAAGATGAATTC	NA	False	NA	NA	False	NA	NA	NA	10353674	10382484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_10353918_10377797_10377895_10378758_10378833_10381799
transcript_111505.known	chr5	+	1291	6	FSM	ENSG00000145491.12	ENST00000503804.5	1291	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.35646599662505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACCTCTGTAGTGTGAGT	10441513	False	NA	NA	False	AATACA	-16	NA	10441523	10465024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10442004_10442126_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
transcript_111506.known	chr5	+	1061	5	FSM	ENSG00000145491.12	ENST00000274134.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.22474487139159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTCTGTAGTGTGAGTGT	10441827	True	NA	NA	False	AATACA	-18	NA	10441878	10465026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_10442299_10448259_10448384_10449951_10450114_10461183_10461360_10464847
transcript_111514.nnic	chr5	+	1953	3	NNC	ENSG00000248131.6	novel	1844	4	NA	NA	13780	-47264	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTTGATCTTTCTTT	12660533	True	NA	NA	False	AATAAA	-28	NA	12662743	12713531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_12663088_12711197_12711300_12712024
transcript_111516.nnic	chr5	+	736	3	NNC	ENSG00000248131.6	novel	1844	4	NA	NA	13780	-1147	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCGTGCAGTAATATT	12660533	True	NA	NA	False	AATAAA	-16	NA	12662743	12759648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_12663088_12711197_12711300_12759358
transcript_111527.nnic	chr5	-	787	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTCGTTTTTGTAT	-12668115	False	NA	-17	True	TATAAA	-19	NA	12668134	12642188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_12642577_12667735
transcript_111529.nnic	chr5	-	538	2	Antisense	novelGene_ENSG00000248131.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAAGAAGATTCTAGCT	-12650344	True	NA	NA	False	AATAAA	-18	NA	12668011	12642314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_12642577_12667735
transcript_11153.known	chr1	-	2387	12	FSM	ENSG00000177628.16	ENST00000327247.9	2387	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	21.5061013829614	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155244656	False	NA	NA	False	NA	NA	NA	155244670	155234451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085_155241181_155244505
transcript_111533.known	chr5	+	7040	8	FSM	ENSG00000145569.6	ENST00000274217.4	7040	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	8.83869045614744	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGAGTTTCAGGCAAGATT	14581084	True	NA	NA	False	AATAAA	-28	NA	14581791	14616180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_14581959_14600964_14601125_14601212_14601245_14601350_14601443_14602182_14602333_14607329_14607459_14608747_14609018_14610140
transcript_111536.known	chr5	-	528	3	FSM	ENSG00000261360.2	ENST00000567048.1	528	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACAGTTTGTGGTCCTTT	-14664524	True	NA	NA	False	AATAAA	-17	NA	14664573	14663100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_14663316_14663878_14664052_14664433
transcript_111546.known	chr5	-	1707	6	FSM	ENSG00000173545.5	ENST00000308683.3	1707	6	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	28.7930547181087	1446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTTCAGATGTCGTTT	-16460088	True	NA	-9	True	AATAAA	-14	NA	16465800	16451518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16451785_16453012_16453157_16458516_16458630_16463107_16463271_16463481_16463743_16465040
transcript_111551.known	chr5	-	4839	23	FSM	ENSG00000145555.15	ENST00000515803.5	4839	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_21	103.274537836241	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTAATCGACCGTAACT	-16738248	False	160	NA	False	NA	NA	NA	16738414	16666379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16666794_16668276_16668469_16670525_16670979_16671421_16671543_16672688_16672826_16673681_16673890_16674852_16675151_16676030_16676155_16679946_16680105_16681308_16681504_16681870_16682014_16683879_16683936_16685737_16685832_16689823_16689920_16694370_16694615_16699449_16699574_16700962_16701839_16702542_16702589_16702924_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16738135
transcript_111554.nic	chr5	-	1027	5	ISM	ENSG00000145555.15	ENST00000505695.5	4803	23	-22	36364	-22	51	5prime_fragment	FALSE	canonical	0	0	junction_3	147.431975839707	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACAGTACCTTTCTTGCT	-16742084	False	NA	60	True	AAGAAA	-41	NA	16742250	16702925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_16703159_16704578_16704686_16710907_16711023_16711120_16711246_16741803
transcript_111564.known	chr5	-	1677	4	FSM	ENSG00000145555.15	ENST00000507288.1	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	32.4995726467629	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCATTAGTTTTCTT	-16934055	True	NA	1	True	AATAAA	-21	NA	16936259	16814516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16815464_16818008_16818168_16877608_16877708_16935787
transcript_111565.known	chr5	-	348	1	FSM	ENSG00000243538.1	ENST00000470806.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	16902641	16902293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_16902300_16902600
transcript_111566.known	chr5	-	542	3	FSM	ENSG00000215196.5	ENST00000665653.1	542	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTAGTGGGTTCA	-17216215	False	NA	NA	False	NA	NA	NA	17216233	17144861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_17145150_17162468_17162566_17216076
transcript_111567.known	chr5	-	930	1	FSM	ENSG00000223361.5	ENST00000401830.3	930	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	855	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAGAGATAGGAGTCTCT	NA	False	NA	NA	False	CATAAA	-32	NA	17354624	17353694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_17353700_17354600
transcript_111568.known	chr5	+	3512	2	FSM	ENSG00000248455.7	ENST00000668161.1	3512	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATAAATATG	NA	False	NA	NA	False	AATATA	-32	NA	17404043	17414717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_17404730_17411891
transcript_111569.nnic	chr5	-	862	4	Antisense	novelGene_ENSG00000241552.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	93.6625147359746	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCTGTTTCCTTACTT	-18674185	False	NA	NA	False	AATAAA	-14	NA	18674258	18454330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_18454715_18658426_18658540_18664323_18664435_18674004
transcript_11157.known	chr1	-	2291	11	FSM	ENSG00000177628.16	ENST00000368373.8	2291	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	9.84936546179499	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGAGTGGCTTTAT	-155241177	False	NA	NA	False	NA	NA	NA	155241249	155234451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155235101_155235194_155235312_155235680_155235845_155236244_155236470_155237340_155237579_155238133_155238307_155238516_155238651_155239615_155239763_155239885_155240078_155240629_155240718_155241085
transcript_111577.nnic	chr5	+	1210	5	NIC	ENSG00000183666.18	novel	1622	9	NA	NA	-3	-8003	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	11.3880419739304	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAAGGGTCTTCAAAG	21458248	True	NA	NA	False	AAAAAG	-6	NA	21459448	21502899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21502110
transcript_111578.nnic	chr5	+	785	5	NIC	ENSG00000183666.18	novel	1569	8	NA	NA	-3	-362	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	14.6692706021806	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTTGAGGTCTTTG	21458248	True	NA	NA	False	ATTAAA	-20	NA	21459448	21510540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21510176
transcript_111579.nnic	chr5	+	1147	5	NIC	ENSG00000183666.18	novel	1622	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	14.6692706021806	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTACCTTGGTGCTTGC	21458248	True	NA	NA	False	AATAAA	-14	NA	21459448	21510902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21510176
transcript_111583.known	chr5	+	4157	5	FSM	ENSG00000183666.18	ENST00000607545.5	4157	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.9902313929474	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGTCATATTTATT	21458355	True	NA	NA	False	AATAAA	-18	NA	21459555	21589372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21501691_21501827_21585529
transcript_111584.nnic	chr5	+	461	4	FSM	ENSG00000183666.18	ENST00000691699.1	614	4	-31	184	-3	-184	multi-exon	FALSE	canonical	2	3	junction_3	16.1107279647928	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGCATTATTTATCTCA	21458248	True	NA	NA	False	TTTAAA	-16	NA	21459448	21466793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618
transcript_111585.nnic	chr5	+	667	4	FSM	ENSG00000183666.18	ENST00000691699.1	614	4	-31	-22	-3	22	multi-exon	FALSE	canonical	2	3	junction_3	16.1107279647928	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAATGGTACAAATTTTT	21458248	True	NA	NA	False	TATAAA	-37	NA	21459448	21466999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21466618
transcript_111586.nnic	chr5	+	985	4	ISM	ENSG00000183666.18	ENST00000688960.1	1607	6	-66	3242	-3	-3230	5prime_fragment	FALSE	canonical	1	2	junction_3	16.5797734872612	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTATCCTATTAGTTC	21458248	True	NA	NA	False	GATAAA	-15	NA	21459448	21471208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_21459585_21459677_21459744_21461782_21461867_21470509
transcript_111587.known	chr5	+	1305	4	FSM	ENSG00000183666.18	ENST00000685140.1	1644	4	61	278	0	1	multi-exon	FALSE	canonical	3	17	junction_3	9.56846672960488	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTTATTTATGT	21458312	True	NA	NA	False	AATAAA	-22	NA	21459512	21474439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_21459585_21459677_21459744_21461782_21461867_21473356
transcript_111589.nnic	chr5	+	515	3	Antisense	novelGene_ENSG00000154162.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTTCAAATACCTT	NA	False	NA	NA	False	AATAAA	-24	NA	22618827	22672892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_22618995_22648295_22648362_22672610
transcript_111594.nnic	chr5	+	478	4	Antisense	novelGene_ENSG00000251273.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACTGGACAAATGAC	25083253	True	NA	NA	False	AATAAA	-27	NA	25083271	25144397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_25083341_25083571_25083711_25143147_25143185_25144164
transcript_111596.nnic	chr5	-	1275	7	Fusion	ENSG00000251654.2_ENSG00000248605.5	novel	558	5	NA	NA	-36	-59553	multi-exon	FALSE	canonical	1	1	junction_1	4.13991411612474	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCATTTTAAATATGTG	-25445346	True	NA	-15	True	AATAAA	-14	NA	25445961	25278525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_25278744_25279010_25279473_25280930_25281054_25284709_25284833_25298527_25298610_25352036_25352162_25445819
transcript_11161.known	chr1	-	3190	12	FSM	ENSG00000160767.22	ENST00000361361.7	3190	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	15.4041960581637	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGTCACCAGTGAAAT	-155255473	False	NA	-16	True	AATAAA	-30	NA	155255483	155247204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155247956_155248049_155248304_155248404_155248474_155250275_155250822_155251094_155251165_155251501_155251602_155251732_155251906_155253624_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
transcript_111621.nnic	chr5	-	768	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-154	-18090	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	30.5	180	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATTGGATATGAAGTAA	-25446067	False	NA	NA	False	AATAAA	-18	NA	25446079	25433735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_111622.nnic	chr5	-	688	3	NNC	ENSG00000248605.5	novel	638	3	NA	NA	-154	-18170	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	30.5	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAAAAATTATAGA	-25446067	False	NA	NA	False	NA	NA	NA	25446079	25433815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_25434212_25435241_25435274_25445819
transcript_111624.known	chr5	-	188	1	FSM	ENSG00000279531.1	ENST00000623500.1	188	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAAGCTTTCTTTGTCTAT	-25425588	False	NA	-7	True	AATAAA	-23	NA	25425599	25425411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_25425400_25425600
transcript_111626.known	chr5	+	1274	7	FSM	ENSG00000250337.8	ENST00000664566.1	1274	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	40.1815325187524	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAACAATGAGTGTCATT	27467045	True	NA	5	True	AATAAA	-17	NA	27472293	27496395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27484925_27485030_27494234_27494336_27495948
transcript_11163.known	chr1	-	2103	5	FSM	ENSG00000160767.22	ENST00000481822.1	2103	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	10.6183802907977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-155255473	False	NA	NA	False	NA	NA	NA	155255483	155252748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155253733_155253858_155253979_155254083_155254195_155254399_155254457_155254652
transcript_111631.known	chr5	+	1177	6	FSM	ENSG00000250337.8	ENST00000514844.6	1177	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	44.1107696600275	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCATTTTGTAATTAC	27467022	True	NA	15	True	AATAAA	-27	NA	27472270	27496405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27489281_27489387_27494234_27494336_27495948
transcript_111634.nnic	chr5	+	819	5	FSM	ENSG00000250337.8	ENST00000687778.1	755	5	-64	0	5	0	multi-exon	FALSE	canonical	3	7	junction_4	46.7406407743839	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGTTAGGTGTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	27472239	27482554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638_27477802_27482411
transcript_111640.known	chr5	+	801	5	FSM	ENSG00000250337.8	ENST00000670840.1	801	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.9913555880228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATTGTGATTTATTAAA	27467052	True	NA	NA	False	AGTAAA	-34	NA	27472300	27485152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477679_27477802_27484925
transcript_111643.known	chr5	+	1117	5	FSM	ENSG00000250337.8	ENST00000510165.6	1117	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	45.702160780427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467035	True	NA	14	True	AATAAA	-26	NA	27472283	27496404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27494234_27494336_27495948
transcript_111644.known	chr5	+	1058	5	FSM	ENSG00000250337.8	ENST00000665451.1	1058	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.3919824442911	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467035	True	NA	14	True	AATAAA	-26	NA	27472283	27496404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27494234_27494336_27495948
transcript_111645.nic	chr5	+	1042	4	ISM	ENSG00000250337.8	ENST00000687778.1	755	5	-64	4387	5	140	5prime_fragment	FALSE	canonical	3	21	junction_2	48.0901930404388	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAGAAAAAAAAGAA	NA	False	NA	29	True	NA	NA	NA	27472239	27478167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_27472520_27475534_27475696_27476086_27476159_27477638
transcript_111646.nnic	chr5	+	747	4	NIC	ENSG00000250337.8	novel	755	5	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_3	48.251655124174	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGTTAGGTGTGTAT	NA	False	NA	NA	False	AATAAA	-21	NA	27472239	27482554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_27472520_27475534_27475696_27477638_27477802_27482411
transcript_111648.known	chr5	+	1325	4	FSM	ENSG00000250337.8	ENST00000659860.1	1325	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	33.7276675083759	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATTAGCCTAATGTCATT	27467031	True	NA	NA	False	AATAAA	-28	NA	27472279	27485686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27484925
transcript_111651.nic	chr5	+	1060	4	FSM	ENSG00000250337.8	ENST00000686605.1	1016	4	-41	-3	5	0	multi-exon	FALSE	canonical	2	7	junction_3	48.251655124174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	NA	False	NA	14	True	AATAAA	-26	NA	27472239	27496404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27477638_27477802_27495948
transcript_111655.known	chr5	+	971	4	FSM	ENSG00000250337.8	ENST00000659077.1	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	50.3940031705714	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467021	True	NA	14	True	AATAAA	-26	NA	27472269	27496404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925_27485030_27495948
transcript_111656.known	chr5	+	1078	4	FSM	ENSG00000250337.8	ENST00000660307.1	1078	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	52.1621403787161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTCATTTTGTAATTA	27467027	True	NA	14	True	AATAAA	-26	NA	27472275	27496404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27494118_27494336_27495948
transcript_111657.known	chr5	+	1605	4	FSM	ENSG00000250337.8	ENST00000655107.1	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.3916348004691	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTTATGAAAGACATTT	NA	False	NA	NA	False	AATAAA	-15	NA	27472222	27496994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27494234_27494336_27495948
transcript_111661.nic	chr5	+	970	3	ISM	ENSG00000250337.8	ENST00000659860.1	1325	4	-40	7519	5	140	5prime_fragment	FALSE	canonical	3	51	junction_2	36.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAGAAGAAAAAAAAGAA	NA	False	NA	29	True	NA	NA	NA	27472239	27478167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_27472520_27475534_27475696_27477638
transcript_111663.known	chr5	+	523	3	FSM	ENSG00000250337.8	ENST00000503107.2	523	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGATGAGTTAGGTGTGTAT	27467052	True	NA	NA	False	AATAAA	-21	NA	27472300	27482554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27482411
transcript_111664.known	chr5	+	1610	3	FSM	ENSG00000250337.8	ENST00000512067.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	49	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATTGAAATAACTTA	27467043	True	NA	NA	False	ATTAAA	-9	NA	27472291	27486146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27484925
transcript_111666.known	chr5	+	1456	3	FSM	ENSG00000250337.8	ENST00000653835.1	1456	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	60.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTTATGAAAGACATTT	27467022	True	NA	NA	False	AATAAA	-15	NA	27472270	27496994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_27472520_27475534_27475696_27495948
transcript_111675.known	chr5	+	2759	2	FSM	ENSG00000113361.13	ENST00000506396.1	2759	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCTGAAGTAAGATTATT	31193529	True	NA	NA	False	AATAAA	-15	NA	31193768	31251854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31193887_31249213
transcript_111678.known	chr5	-	5416	36	FSM	ENSG00000113360.17	ENST00000344624.8	5416	36	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_30	67.6136443179865	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCATTCATCATTTC	-31522557	True	NA	NA	False	AATAAA	-25	NA	31532093	31400493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_111679.known	chr5	-	5305	35	FSM	ENSG00000113360.17	ENST00000511367.6	5305	35	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_34	76.3270882089948	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTGTTTCATTCATCAT	-31522525	True	NA	NA	False	AATAAA	-22	NA	31532061	31400496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31515453_31515565_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531989
transcript_111680.known	chr5	-	4681	35	FSM	ENSG00000113360.17	ENST00000513349.5	4681	35	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_29	71.9992610977079	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTCCATCTGTGTCC	-31522573	True	NA	NA	False	AATAAA	-33	NA	31532109	31401133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_31401563_31405676_31405724_31406852_31406946_31409055_31409160_31409249_31409333_31410745_31410888_31421271_31421378_31422786_31422945_31424426_31424472_31429474_31429546_31431575_31431679_31435764_31435865_31437238_31437299_31448546_31448608_31449280_31449420_31451532_31451641_31464235_31464344_31466181_31466282_31467938_31468064_31472062_31472233_31483553_31483629_31484880_31484963_31486490_31486563_31493206_31493294_31495285_31495373_31504554_31504636_31508620_31508776_31511034_31511177_31514987_31515220_31521122_31521216_31526078_31526913_31529039_31529106_31530797_31530925_31531449_31531526_31531989
transcript_111693.known	chr5	+	3572	9	FSM	ENSG00000082213.18	ENST00000325366.14	3572	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_2	29.3342802877453	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACTTAAGTGTAAGCGT	31528402	True	NA	19	True	ATTAAA	-30	NA	31532300	31555053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538259_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_111696.known	chr5	+	3117	9	FSM	ENSG00000082213.18	ENST00000510659.5	3117	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	99.060508655064	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAGGTTTGTTTAATTC	31528388	True	NA	17	True	AATAAA	-18	NA	31532286	31554808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271_31534418_31535743_31535894_31538483_31538690_31540948_31541012_31541280_31541403_31545645_31545713_31551292_31551433_31552772
transcript_111699.known	chr5	+	583	4	FSM	ENSG00000082213.18	ENST00000511208.2	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	110.545113968109	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGGTAAATAATTGTGTT	31528400	True	NA	NA	False	AAGAAA	-7	NA	31532298	31538684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_31532474_31534271_31534326_31535743_31535894_31538480
transcript_1117.known	chr1	-	708	3	FSM	ENSG00000078369.18	ENST00000472614.2	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	1595	junction_2	220	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGATGTATTTTTTCCT	-1890869	False	NA	NA	False	AATAAA	-17	NA	1890966	1824987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1825500_1839189_1839239_1890819
transcript_11170.nnic	chr1	-	1579	9	NNC	ENSG00000116521.11	novel	1545	9	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_5	190.311586615214	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262422	False	NA	-2	True	AATAAA	-23	NA	155262436	155255980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258913_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_111701.known	chr5	+	802	1	FSM	ENSG00000272086.1	ENST00000606994.1	802	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGGCTGTGGCTAAAGA	32174379	False	NA	8	True	AATAAA	-20	NA	32174470	32175272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32174500_32175300
transcript_111702.known	chr5	+	416	1	FSM	ENSG00000230829.3	ENST00000477507.1	416	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTGTTTTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	32221931	32222347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32221900_32222300
transcript_111703.known	chr5	-	5116	16	FSM	ENSG00000150712.11	ENST00000382142.8	5116	16	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	18.1365193279563	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTACTTGGTGTGGTTG	-32307903	True	NA	-6	True	ATTAAA	-18	NA	32312939	32227006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32230348_32233772_32233935_32234961_32235130_32239000_32239174_32242056_32242128_32243520_32243600_32248001_32248127_32248771_32248879_32255692_32255769_32263112_32263243_32268700_32268795_32270816_32270948_32271832_32271906_32273979_32274123_32276681_32276743_32312757
transcript_111706.known	chr5	-	4717	20	FSM	ENSG00000056097.16	ENST00000265069.13	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	546	junction_16	63.6680275219192	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTACTGCATCTTGTTA	-32427933	True	NA	-11	True	AGTAAA	-17	NA	32444740	32354349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32355940_32363947_32364046_32364163_32364276_32379114_32379211_32380074_32380173_32385507_32385650_32387548_32387700_32388468_32388675_32390274_32390438_32395158_32395305_32397218_32397339_32400006_32400204_32403105_32403398_32403905_32404098_32406773_32407022_32414968_32415188_32417647_32417793_32419820_32420104_32444228_32444329_32444621
transcript_111715.known	chr5	+	771	6	FSM	ENSG00000113387.12	ENST00000515355.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1966.17069452273	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTGCCCACCACCTAG	32555608	True	NA	-37	True	ATTAAA	-42	NA	32585570	32601282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32586368_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_111725.known	chr5	+	562	6	FSM	ENSG00000113387.12	ENST00000502897.5	562	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1967.40722780008	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTCTAAATGTTCTC	32555625	True	NA	43	True	NA	NA	NA	32585587	32601150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32586428_32586502_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_11173.known	chr1	-	1545	9	FSM	ENSG00000116521.11	ENST00000302631.8	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_7	62.0603285118601	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262346	False	NA	-2	True	AATAAA	-23	NA	155262360	155255980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155261656_155261735_155262085
transcript_111737.known	chr5	+	3449	5	FSM	ENSG00000113387.12	ENST00000265073.9	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	3694	junction_4	227.03468897946	14768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGTGTTATCCCGGTT	32555594	True	NA	13	True	AATAAA	-14	NA	32585556	32604079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32598960_32599070_32601004
transcript_111738.known	chr5	+	1658	6	FSM	ENSG00000113387.12	ENST00000511615.5	1658	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1908.65875420411	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATTATATGTAGCCAG	32555596	True	NA	41	True	NA	NA	NA	32585558	32601988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_32585626_32588511_32588585_32591562_32591686_32594570_32594873_32598960_32599070_32601004
transcript_111739.known	chr5	-	156	1	FSM	ENSG00000251062.1	ENST00000504072.1	156	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATTCAGCATTAAAATAA	NA	False	NA	NA	False	AAGAAA	-31	NA	32888145	32887989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_32888000_32888100
transcript_111740.known	chr5	+	629	1	FSM	ENSG00000240376.1	ENST00000467270.1	629	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	582	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTTGTCTTCACC	33162129	False	NA	-24	True	NA	NA	NA	33162178	33162807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33162200_33162800
transcript_111748.known	chr5	+	2672	19	FSM	ENSG00000113407.14	ENST00000265112.8	2672	19	0	0	0	0	multi-exon	FALSE	canonical	3	1347	junction_9	156.852450914943	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGTTTCAAGACTGCTC	33421485	True	NA	13	True	AATAAA	-16	NA	33440964	33468086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33441144_33445323_33445405_33448540_33448732_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_111749.known	chr5	+	2481	18	FSM	ENSG00000113407.14	ENST00000508361.5	2481	18	0	0	0	0	multi-exon	FALSE	canonical	2	125	junction_2	380.995835921627	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATAAGTTTCAAGACTGCT	33421484	True	NA	12	True	AATAAA	-15	NA	33440963	33468085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_33441144_33445323_33445405_33453288_33453413_33454944_33455067_33455586_33455705_33456001_33456067_33456148_33456228_33457256_33457404_33458565_33458665_33459694_33459862_33460901_33461065_33461157_33461296_33461666_33461745_33461905_33462007_33462098_33462204_33463752_33463826_33466870_33466986_33467559
transcript_111756.nnic	chr5	-	1020	4	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-625	61	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	13.4246870437348	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGATGCTCATAAGACA	NA	False	NA	NA	False	AATAAA	-20	NA	33892644	33751136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_33751549_33881118_33881481_33891729_33891842_33892510
transcript_111759.nnic	chr5	-	835	4	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-625	-124	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	13.4246870437348	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTCTCTTATCTCCTC	NA	False	NA	-12	True	ATTAAA	-17	NA	33892644	33751321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_33751549_33881118_33881481_33891729_33891842_33892510
transcript_111761.known	chr5	-	1003	3	FSM	ENSG00000151388.11	ENST00000515401.1	1003	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	3	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACTCGAGTCTCTGCATA	NA	False	NA	NA	False	TATAAA	-15	NA	33892019	33751197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33751549_33881118_33881481_33891729
transcript_111762.nnic	chr5	-	503	3	NNC	ENSG00000151388.11	novel	1003	3	NA	NA	-625	-124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTCTCTTATCTCCTC	NA	False	NA	-12	True	ATTAAA	-17	NA	33892644	33751321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_33751549_33881118_33881261_33892510
transcript_111767.known	chr5	-	1195	6	FSM	ENSG00000242110.8	ENST00000382085.7	1195	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	31.922405924366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTCAGGACCCCCCAGCA	-34007004	True	NA	-19	True	AATAAA	-1	NA	34008028	33988306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33988362_33989110_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_111768.known	chr5	-	4108	5	FSM	ENSG00000242110.8	ENST00000335606.11	4108	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	4.20565096031518	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAATTTATTTACATTTT	-34007026	True	NA	NA	False	AGTAAA	-40	NA	34008050	33986164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33989503_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_111772.known	chr5	-	1316	5	FSM	ENSG00000242110.8	ENST00000426255.6	1316	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	36.8951216287465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATACTGGACATT	-34007060	True	NA	NA	False	AATAAA	-12	NA	34008084	33997006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33997519_33998640_33998828_34004573_34004735_34005755_34005900_34007772
transcript_111773.known	chr5	-	2919	4	FSM	ENSG00000242110.8	ENST00000382072.6	2919	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	32.355662392986	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGGTGTGTGCCTGTA	-34007007	True	NA	NA	False	AATAAA	-20	NA	34008031	33987173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33989503_33998640_33998828_34005755_34005900_34007772
transcript_111774.known	chr5	-	1598	5	FSM	ENSG00000242110.8	ENST00000502637.5	1598	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	36.8001358693144	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCACGTGAAACAGAGTG	-34007080	True	NA	-36	True	NA	NA	NA	34008104	33988683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_33989503_33998640_33998783_34004573_34004735_34005755_34005900_34007772
transcript_111777.known	chr5	+	4986	18	FSM	ENSG00000039560.14	ENST00000265109.8	4986	18	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_10	95.3680541058935	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGTGTTGATTTTTGG	34645933	True	NA	17	True	AATAAA	-17	NA	34656327	34832612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34813573_34813661_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_111778.known	chr5	+	2941	17	FSM	ENSG00000039560.14	ENST00000512629.5	2941	17	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	172.062477297492	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGATTCCTTGGCAGGAC	34646044	False	NA	0	True	NA	NA	NA	34656438	34830765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34656476_34686871_34686956_34757467_34757599_34795938_34796028_34803711_34803777_34807799_34807858_34808583_34808655_34811011_34811119_34811766_34811946_34812179_34812209_34814582_34814670_34818796_34818852_34821731_34821851_34822955_34824492_34826329_34826480_34829731_34829798_34830687
transcript_111787.known	chr5	+	550	3	FSM	ENSG00000039560.14	ENST00000514931.5	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	48	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTCGATAAGAAATAGCAT	34646016	True	NA	NA	False	NA	NA	NA	34656410	34757868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34656476_34686871_34686956_34757467
transcript_111790.nic	chr5	+	653	5	NIC	ENSG00000205838.14	novel	1353	11	NA	NA	23717	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	1.58113883008419	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATTCTCGACCACAAA	34864343	True	NA	NA	False	AATAAA	-18	NA	34864388	34899456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_34864563_34866891_34867070_34880180_34880309_34896769_34896876_34899389
transcript_111792.known	chr5	+	348	3	FSM	ENSG00000205838.14	ENST00000508377.5	348	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCCTGTTTAGAGA	34839192	False	NA	NA	False	ACTAAA	-19	NA	34839213	34845713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34839260_34840664_34840740_34845486
transcript_111793.known	chr5	-	1565	2	FSM	ENSG00000272323.1	ENST00000606401.1	1565	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTTTCTTTTTTTGA	-34839215	True	NA	NA	False	AATAAA	-15	NA	34839278	34837548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34839018_34839182
transcript_111797.known	chr5	+	743	8	FSM	ENSG00000113460.13	ENST00000506023.1	743	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	504.134578728129	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTGTAACACCAGC	34907573	False	NA	56	True	AAGAAA	-37	NA	34915751	34925345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34915898_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_1118.known	chr1	+	670	6	FSM	ENSG00000169885.10	ENST00000307786.8	670	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTGCCTCACTGTC	1915140	False	NA	NA	False	AATAAA	-14	NA	1915259	1917296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1915308_1915684_1915736_1916440_1916616_1916751_1916897_1916973_1917075_1917146
transcript_11180.known	chr1	-	1537	8	FSM	ENSG00000116521.11	ENST00000355379.3	1537	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	191.11541549759	885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCCGTTTCCTGAATCT	-155262416	False	NA	-2	True	AATAAA	-23	NA	155262430	155255980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155256420_155256673_155256792_155257284_155257387_155257497_155257658_155258825_155258955_155260329_155260451_155260536_155260660_155262085
transcript_111808.known	chr5	-	1328	7	FSM	ENSG00000113456.19	ENST00000513914.5	1328	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	126.799601296254	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGGGGAAGATAGGAGCAA	-34912832	True	NA	-109	True	NA	NA	NA	34915615	34908654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34913926_34914027_34914694_34914962_34915415
transcript_111819.known	chr5	-	4512	6	FSM	ENSG00000113456.19	ENST00000382038.7	4512	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	54.2217668469038	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGTGTATAGTATTTTT	-34912721	True	NA	2	True	AATAAA	-21	NA	34915504	34905259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34913469_34913579_34914694_34914962_34915415
transcript_111828.known	chr5	-	1153	5	FSM	ENSG00000113456.19	ENST00000325577.8	1153	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	102.255806681088	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATTCAGGACTGTCCTT	-34912765	True	NA	-8	True	AATAAA	-19	NA	34915548	34908553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34908949_34909257_34909357_34911553_34911813_34914694_34914962_34915415
transcript_111832.known	chr5	-	664	4	FSM	ENSG00000113456.19	ENST00000511456.3	664	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	153.258677477728	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGGATATGACGAGT	-34912734	True	NA	5	True	AATAAA	-38	NA	34915517	34911617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34911813_34913926_34914027_34914694_34914962_34915415
transcript_111833.nic	chr5	-	828	4	ISM	ENSG00000113456.19	ENST00000382038.7	4512	6	-190	6380	-79	-22	5prime_fragment	FALSE	canonical	3	197	junction_2	67.4899169423766	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCTCCGTGAAGCATT	NA	False	NA	-17	True	AATAAA	-16	NA	34915694	34911639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_34911813_34913469_34913579_34914694_34914962_34915415
transcript_111835.nic	chr5	-	719	3	ISM	ENSG00000113456.19	ENST00000325577.8	1153	5	-146	3086	-79	-22	5prime_fragment	FALSE	canonical	3	72	junction_1	136	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGCTCCGTGAAGCATT	NA	False	NA	-17	True	AATAAA	-16	NA	34915694	34911639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_34911813_34914694_34914962_34915415
transcript_111837.known	chr5	-	1678	3	FSM	ENSG00000113456.19	ENST00000628399.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACGAAGATCGCTTGAGC	NA	False	NA	-97	True	NA	NA	NA	34916769	34913969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34914027_34914694_34914962_34915415
transcript_111838.known	chr5	-	574	2	FSM	ENSG00000113456.19	ENST00000506311.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTACAGAGATAATGGT	-34912721	True	NA	NA	False	NA	NA	NA	34915504	34914476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34914962_34915415
transcript_111840.known	chr5	-	263	2	FSM	ENSG00000113456.19	ENST00000512192.1	263	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGCTCATGCATTATCAA	-34914791	False	NA	2	True	AATAAA	-26	NA	34914801	34913870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_34914027_34914694
transcript_111841.known	chr5	+	1591	10	FSM	ENSG00000113460.13	ENST00000336767.6	1591	10	0	0	0	0	multi-exon	FALSE	canonical	3	1405	junction_9	82.9584158806814	1534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTGTGTTGAAAGC	34907532	True	NA	NA	False	ATTAAA	-28	NA	34915710	34925996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34922288_34922538_34922589_34922694_34922769_34923000_34923052_34923132_34923235_34924846_34924976_34925225
transcript_111842.known	chr5	+	2196	5	FSM	ENSG00000113460.13	ENST00000515798.5	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	1487	junction_4	84.6710546763178	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGATTTCTTTTTGA	34907531	True	NA	22	True	AATAAA	-23	NA	34915709	34925680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34915898_34918363_34918476_34919839_34919884_34922216_34923235_34924846
transcript_111843.known	chr5	+	6208	13	FSM	ENSG00000168724.17	ENST00000382021.2	6208	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_10	84.9866002509938	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	34926665	True	NA	8	True	AATAAA	-18	NA	34929592	34958964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34949542_34949678_34950169_34950343_34953925_34954002_34954552
transcript_111847.known	chr5	+	2788	12	FSM	ENSG00000168724.17	ENST00000642851.1	2788	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	91.4910463938845	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGTGAAACCCCGTCTCTA	34929776	False	NA	NA	False	NA	NA	NA	34929819	34955867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945721_34945804_34950169_34950343_34953925_34954002_34954552
transcript_111848.known	chr5	+	6107	12	FSM	ENSG00000168724.17	ENST00000648817.1	6107	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_9	37.7812319492537	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGCTTCTGCAGTCTAT	34926631	True	NA	8	True	AATAAA	-18	NA	34929558	34958964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34929917_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_111851.known	chr5	+	2989	12	FSM	ENSG00000168724.17	ENST00000646714.1	2989	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	138.964589103819	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	34930027	False	NA	NA	False	NA	NA	NA	34930070	34955878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937329_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945721_34945804_34950169_34950343_34953925_34954002_34954552
transcript_111852.known	chr5	+	2338	12	FSM	ENSG00000168724.17	ENST00000642675.1	2338	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	92.6972322105905	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTCCGATTTTAAAAATT	34929933	False	NA	-28	True	AAAAAG	-29	NA	34929976	34955168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_34930362_34933814_34933909_34935709_34935834_34936143_34936267_34937325_34937631_34938857_34939010_34941095_34941184_34944866_34945026_34945760_34945804_34950169_34950343_34953925_34954002_34954552
transcript_111856.nnic	chr5	+	414	2	Antisense	novelGene_ENSG00000113492.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGCCTCAGGTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	35003592	35008123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_35003864_35007980
transcript_111858.known	chr5	-	665	5	FSM	ENSG00000152611.12	ENST00000513623.5	665	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGACACTGATGTGTA	NA	False	NA	NA	False	NA	NA	NA	35938635	35904601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_35904647_35909865_35910076_35910365_35910544_35920983_35921121_35938540
transcript_111860.known	chr5	-	4918	7	FSM	ENSG00000145626.12	ENST00000274278.8	4918	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.72581562625261	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAGTCTATTGAGTAA	-35991257	True	NA	NA	False	AAAAAG	-14	NA	35991390	35951005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_35954479_35955644_35955865_35957187_35957420_35965385_35965918_35968018_35968134_35988449_35988552_35991146
transcript_111862.nic	chr5	-	1373	4	ISM	ENSG00000145626.12	ENST00000333811.5	1114	5	-47	2222	-47	-2222	5prime_fragment	FALSE	canonical	3	12	junction_3	1.24721912892465	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTTGTGTGATTAT	-35991347	True	NA	NA	False	ATTAAA	-20	NA	35991480	35965095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_35965918_35968018_35968134_35988449_35988552_35991146
transcript_111863.known	chr5	-	5002	8	FSM	ENSG00000145626.12	ENST00000515801.5	5002	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.34291272908365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACTGTCAAATGCAT	NA	False	NA	NA	False	AATAAA	-16	NA	35991605	35953107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_35954479_35954818_35955865_35957187_35957420_35961988_35962952_35965385_35965918_35968018_35968134_35988449_35988552_35990964
transcript_111866.known	chr5	-	2342	7	FSM	ENSG00000168671.10	ENST00000282507.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	17.8271017149607	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAATGATTGGCCAAGAGA	-36065542	True	NA	-19	True	AATAAA	-31	NA	36066882	36035020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36064248_36064351_36066695
transcript_111869.known	chr5	-	1924	6	FSM	ENSG00000168671.10	ENST00000513300.5	1924	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	53.3389163744447	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTCCATGTCCAGACC	-36065542	True	NA	-97	True	NA	NA	NA	36066882	36035336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36048888_36049421_36051869_36051985_36066695
transcript_111870.known	chr5	-	1476	6	FSM	ENSG00000168671.10	ENST00000504685.5	1476	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	65.0003076915794	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACACCCTGACTCTTCC	-36065542	True	NA	-115	True	NA	NA	NA	36066882	36035354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36035975_36037796_36038017_36039476_36039709_36051869_36051985_36064248_36064351_36066695
transcript_111875.nic	chr5	-	1310	4	ISM	ENSG00000168671.10	ENST00000515131.1	572	5	327	-727	-75	727	3prime_fragment	FALSE	canonical	3	160	junction_2	10.2089285540757	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	NA	False	NA	-5	True	ATTAAA	-20	NA	36066957	36048589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_36049421_36051869_36051985_36064248_36064351_36066695
transcript_111876.nic	chr5	-	1164	3	ISM	ENSG00000168671.10	ENST00000513300.5	1924	6	-31	13253	-31	727	5prime_fragment	FALSE	canonical	3	17	junction_2	73	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATTTTGTGTGATCAC	-36065573	True	NA	-5	True	ATTAAA	-20	NA	36066913	36048589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_36049421_36051869_36051985_36066695
transcript_111881.known	chr5	-	8116	18	FSM	ENSG00000164187.7	ENST00000296603.5	8116	18	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_17	5.61572187522947	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTTATGTTTGAAAG	-36150986	True	NA	1	True	AATAAA	-26	NA	36151887	36098406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36104107_36105067_36105198_36108533_36108640_36109944_36109992_36111154_36111259_36114423_36114522_36115014_36115121_36116459_36116594_36117734_36117917_36122279_36122464_36122847_36122962_36124190_36124266_36136308_36136520_36137273_36137442_36141106_36141203_36142501_36142600_36143175_36143407_36151555
transcript_111882.known	chr5	-	4011	12	FSM	ENSG00000152620.13	ENST00000381937.9	4011	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_11	16.0361162627797	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATTTCACTTTTTAAT	-36241704	False	NA	NA	False	ATTAAA	-21	NA	36241925	36192588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36241498
transcript_111883.known	chr5	-	2507	12	FSM	ENSG00000152620.13	ENST00000282512.7	2507	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_11	26.2480223576168	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGGTTTTGATGTATATC	-36241921	True	NA	0	True	AATAAA	-20	NA	36242142	36193712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_36195283_36197540_36197665_36200226_36200281_36201105_36201162_36207169_36207266_36211843_36211923_36217747_36217885_36219595_36219680_36225541_36225624_36226474_36226564_36227476_36227566_36242095
transcript_111895.known	chr5	+	3715	10	FSM	ENSG00000145604.17	ENST00000274255.11	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_9	93.3537014812317	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACATATGTATACATGTG	36145831	True	NA	NA	False	TTTAAA	-45	NA	36152110	36184319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_111897.known	chr5	+	1537	10	FSM	ENSG00000145604.17	ENST00000274254.9	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_9	105.806952092531	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTGTATTCCTTTTTT	NA	False	NA	27	True	AATAAA	-30	NA	36151988	36184041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_111899.known	chr5	+	3299	9	FSM	ENSG00000145604.17	ENST00000620197.5	3299	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	195.372560765323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACATTTTTATAAAAATG	36145804	True	NA	-3	True	TTTAAA	-8	NA	36152083	36184011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_1119.nic	chr1	-	987	4	ISM	ENSG00000178821.13	ENST00000310991.8	935	5	41	0	20	0	intron_retention	FALSE	canonical	3	18	junction_3	28.0752955856608	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	-1919225	False	NA	-9	True	AATAAA	-17	NA	1919238	1917590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1918163_1918252_1918432_1918892_1918935_1919044
transcript_111900.nic	chr5	+	1286	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	200.734238173262	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	36145813	True	NA	15	True	AATAAA	-18	NA	36152092	36184029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36152271_36152770_36153043_36163644_36163757_36166518_36166663_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_111901.known	chr5	+	3294	9	FSM	ENSG00000145604.17	ENST00000677911.1	3294	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	184.77418650883	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAACACATTTTTATAA	36145827	True	NA	-8	True	TTTAAA	-3	NA	36152106	36184006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_111903.nic	chr5	+	1336	9	NIC	ENSG00000145604.17	novel	1537	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	190.554413160651	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCTTAAACTAAGTTG	36145786	True	NA	15	True	AATAAA	-18	NA	36152065	36184029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_36152271_36152770_36153043_36166518_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36183839
transcript_111917.known	chr5	+	6122	9	FSM	ENSG00000145604.17	ENST00000678149.1	6122	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	99.0075754677388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAATGAGTGCTTAAA	36145888	True	NA	7	True	AATAAA	-10	NA	36152167	36184021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36152271_36152770_36153043_36163644_36166663_36168312_36168448_36170343_36170443_36171602_36171734_36176964_36177017_36177184_36177293_36181817
transcript_111921.known	chr5	+	3877	10	FSM	ENSG00000079215.15	ENST00000680318.1	3877	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	46.2011169765033	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACATCTTTGCACGTTGTT	36596273	True	NA	13	True	AATAAA	-20	NA	36596587	36688331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36596679_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_111922.known	chr5	+	3919	10	FSM	ENSG00000079215.15	ENST00000265113.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	25.5429920808907	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTTGCACGTTGTTGTT	36603444	True	NA	16	True	AATAAA	-23	NA	36606605	36688334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36676891_36677185_36679626_36679861_36680394_36680590_36683863_36683999_36686064
transcript_111925.known	chr5	+	1204	5	FSM	ENSG00000079215.15	ENST00000502864.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	69.0448223982074	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGACATGAGGGCACATG	36603434	True	NA	NA	False	NA	NA	NA	36606595	36630962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36629942_36630045_36630414
transcript_111930.known	chr5	+	1137	3	FSM	ENSG00000079215.15	ENST00000506725.1	1137	3	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_2	93.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGGGACCACAATAGCC	36603455	True	NA	NA	False	NA	NA	NA	36606616	36613487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36612745
transcript_111932.known	chr5	+	2368	3	FSM	ENSG00000079215.15	ENST00000681775.1	2368	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	27.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGGTTGTGTAATTTTT	36603434	True	NA	NA	False	AAGAAA	-6	NA	36606595	36631401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449
transcript_111933.known	chr5	+	550	3	FSM	ENSG00000079215.15	ENST00000681776.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGGATGTTAAAAGTTA	36603369	True	NA	-97	True	AAGAAA	-16	NA	36606530	36608534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36607172_36607312_36608328
transcript_111937.known	chr5	+	1096	2	FSM	ENSG00000079215.15	ENST00000512374.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAGTTTATTACTTATG	36603449	True	NA	NA	False	AATAAA	-36	NA	36606610	36609299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328
transcript_111939.known	chr5	+	906	6	FSM	ENSG00000079215.15	ENST00000680711.1	906	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	66.7490823906966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTCATTTCACTGATG	36603461	True	NA	NA	False	TATAAA	-6	NA	36606622	36674649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36606736_36608328_36608605_36629449_36629588_36671028_36671234_36674048_36674092_36674518
transcript_111940.known	chr5	+	10425	47	FSM	ENSG00000164190.19	ENST00000282516.13	10425	47	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	28.6490068844129	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCAGGATCTATTTCCT	36876712	False	NA	NA	False	ATTAAA	-16	NA	36876768	37066413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_36877179_36953617_36953761_36955471_36955638_36958103_36958232_36961483_36961584_36962122_36962275_36970875_36971037_36971944_36972042_36975775_36976403_36984675_36986302_36995621_36995805_37000372_37000571_37000816_37000889_37000988_37001079_37002661_37002766_37003260_37003348_37006356_37006589_37007322_37007475_37008007_37008089_37008622_37008724_37010086_37010226_37014682_37014766_37016037_37016171_37017018_37017163_37019310_37019401_37020458_37020674_37020774_37020878_37022050_37022150_37022243_37022391_37024584_37024720_37026228_37026328_37027358_37027413_37036378_37036488_37038601_37038739_37044346_37044488_37044635_37044730_37045442_37045598_37046108_37046200_37048501_37048676_37049110_37049302_37051778_37051887_37052365_37052567_37057185_37057333_37058890_37059166_37060843_37061019_37063789_37063979_37064526
transcript_111943.known	chr5	+	426	2	FSM	ENSG00000286193.3	ENST00000651145.2	493	2	67	0	16	0	multi-exon	FALSE	canonical	2	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTCAGACACTATGCT	37248978	True	NA	NA	False	AATAAA	-17	NA	37249045	37250646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37249222_37250396
transcript_111944.known	chr5	-	529	1	FSM	ENSG00000270558.1	ENST00000603896.1	529	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATATGTTCATTTTGA	-37286956	False	NA	-23	True	AATAAA	-7	NA	37286977	37286448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_37286400_37287000
transcript_111945.known	chr5	-	8068	35	FSM	ENSG00000113569.16	ENST00000231498.8	8068	35	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_16	35.7381988652406	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTCTTCCATTAAAT	-37355407	True	NA	-6	True	AATAAA	-15	NA	37371106	37288136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_37292039_37292878_37292986_37294328_37294466_37298867_37298979_37299447_37299569_37301436_37301551_37302778_37302909_37303259_37303415_37304738_37304844_37305056_37305211_37307296_37307433_37309128_37309268_37310551_37310744_37314197_37314329_37317987_37318086_37323991_37324108_37325900_37325968_37327628_37327777_37328357_37328421_37329189_37329279_37330037_37330133_37331684_37331796_37333462_37333634_37337817_37337919_37341089_37341243_37342548_37342647_37348504_37348597_37349171_37349246_37350159_37350266_37351189_37351357_37352736_37352830_37358080_37358152_37363887_37363985_37364246_37364385_37370820
transcript_111954.known	chr5	+	2877	18	FSM	ENSG00000082068.9	ENST00000265107.9	2877	18	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	24.126827521006	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTGCTTTAGTGACTA	37374842	True	NA	NA	False	ATTAAA	-16	NA	37379317	37753435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37396374_37396571_37437921_37437982_37443238_37443373_37479833_37479988_37516513_37516591_37605063_37605239_37697654_37697755_37701057_37701143_37702948_37703088_37721114_37721216_37722854_37722935_37724933_37725051_37726882_37727046_37752485
transcript_111964.nnic	chr5	+	488	5	NNC	ENSG00000082068.9	novel	1526	12	NA	NA	-43	11798	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	81.2507692271279	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTTGGTCATTTGGAAGC	37374766	True	NA	NA	False	ATTAAA	-20	NA	37379241	37393607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_37379393_37379488_37379555_37381601_37381686_37391999_37392121_37393541
transcript_111968.known	chr5	+	365	3	FSM	ENSG00000082068.9	ENST00000505799.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	6.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGCCAAGGCGGGCA	37374826	True	NA	NA	False	NA	NA	NA	37379301	37381809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_37379393_37379488_37379555_37381601
transcript_111976.nnic	chr5	+	665	4	NIC	ENSG00000248587.8	novel	3660	3	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	11.0855260988773	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTGTTTGGAAAAC	37839812	True	NA	9	True	AATAAA	-29	NA	37839841	37874894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_37840039_37872351_37872466_37874106_37874267_37874700
transcript_111983.known	chr5	-	837	2	FSM	ENSG00000249740.4	ENST00000512519.1	837	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGACTGGGTTTCACCG	-38845813	False	NA	NA	False	NA	NA	NA	38845829	38843262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_38843938_38845667
transcript_111984.nic	chr5	-	1329	11	ISM	ENSG00000164327.13	ENST00000296782.9	7505	39	-6	31528	-6	-1861	5prime_fragment	FALSE	canonical	3	20	junction_1	7.0178344238091	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCTGGGCAT	-39071454	True	NA	NA	False	NA	NA	NA	39074405	38971547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_38971960_38975536_38975605_38978582_38978651_38981866_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_111987.known	chr5	-	1762	8	FSM	ENSG00000164327.13	ENST00000513566.1	1762	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	5.0548017179869	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGGCTCTGTGTTTTGCT	-39071448	True	NA	NA	False	AATAAA	-11	NA	39074399	38980879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074110_39074159_39074328
transcript_111993.known	chr5	-	686	7	FSM	ENSG00000164327.13	ENST00000514735.1	686	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	13.7113092008021	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTATGTGCGAGCTGATG	-39071438	True	NA	NA	False	NA	NA	NA	39074389	38981897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_38982037_38990948_38991076_38996818_38996883_39002534_39002667_39003557_39003623_39021038_39021137_39074328
transcript_111997.known	chr5	+	766	4	FSM	ENSG00000145623.13	ENST00000513831.1	766	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAAAGAGCAAACAAGGT	NA	False	NA	NA	False	AATAAA	-27	NA	38904397	38919566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_38904504_38917545_38917623_38918839_38919063_38919206
transcript_111999.known	chr5	-	4345	15	FSM	ENSG00000153071.15	ENST00000320816.11	4345	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_12	9.18544767442457	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTGGTACCATCGGTTT	-39424962	False	221	1	True	AATAAA	-43	NA	39424980	39371676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_1120.nic	chr1	-	932	3	ISM	ENSG00000178821.13	ENST00000310991.8	935	5	206	0	185	0	intron_retention	FALSE	canonical	3	21	junction_2	29	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	-1918954	True	NA	-9	True	AATAAA	-17	NA	1919073	1917590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1918163_1918252_1918432_1918892
transcript_112000.known	chr5	-	3690	14	FSM	ENSG00000153071.15	ENST00000339788.10	3690	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.1869535171146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTGGTACCATCGGTT	-39424962	False	221	0	True	AATAAA	-42	NA	39424980	39371677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39388304_39388368_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_112001.known	chr5	-	4537	14	FSM	ENSG00000153071.15	ENST00000545653.5	4537	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	11.4007162652592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGGTACCATCGGTTTAT	NA	False	NA	3	True	AATAAA	-45	NA	39425233	39371674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_39373426_39375013_39375085_39375996_39376107_39376649_39377283_39381453_39381617_39382617_39383272_39388798_39388853_39389096_39389124_39389851_39389933_39390443_39390576_39392364_39392464_39393253_39393394_39394229_39394422_39424803
transcript_112003.known	chr5	-	5497	5	FSM	ENSG00000113638.14	ENST00000337702.5	5497	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	9.93415824315276	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATGTGTGGACATATGT	-40754982	True	NA	NA	False	AATAAA	-24	NA	40755961	40711575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40716499_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_112006.nnic	chr5	-	735	5	NNC	ENSG00000113638.14	novel	1149	4	NA	NA	-1	-10659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	45.0076382406364	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTTGCCAATAGTGTC	-40754985	True	NA	NA	False	ATTAAA	-17	NA	40755964	40726803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_40726962_40728344_40728477_40730261_40730344_40746797_40747020_40755823
transcript_112008.known	chr5	-	784	4	FSM	ENSG00000113638.14	ENST00000511730.2	784	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.1347353938354	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGTATGCATAGGATTAT	-40754970	True	NA	NA	False	NA	NA	NA	40755949	40716144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40716499_40730261_40730344_40746797_40747020_40755823
transcript_112010.nic	chr5	-	1686	4	ISM	ENSG00000113638.14	ENST00000337702.5	5497	5	-3	15660	-1	-11091	5prime_fragment	FALSE	canonical	3	101	junction_1	3.77123616632825	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGCAAGACTAAAATTACT	-40754985	True	NA	NA	False	AATAAA	-16	NA	40755964	40727235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_40728477_40730261_40730344_40746797_40747020_40755823
transcript_112011.known	chr5	-	1149	4	FSM	ENSG00000113638.14	ENST00000636863.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.3830927662225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGATTTAACTTTATT	-40754929	True	NA	NA	False	AATAAA	-10	NA	40755908	40512332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40513070_40603931_40604037_40746797_40747020_40755823
transcript_112012.known	chr5	-	1918	10	FSM	ENSG00000132356.12	ENST00000354209.7	1918	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	51.8925765998648	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTTATTTCTTTTGCA	NA	False	NA	-8	True	AATAAA	-8	NA	40798374	40762769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40774927_40774973_40775409_40775504_40777444_40777587_40798062
transcript_112014.known	chr5	-	5088	9	FSM	ENSG00000132356.12	ENST00000397128.7	5254	9	176	-10	-9	10	multi-exon	FALSE	canonical	3	104	junction_7	17.1496173426698	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTACTTATGTTTTTTA	-40798187	False	NA	1	True	AATAAA	-26	NA	40798198	40759378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40763023_40764513_40764641_40764751_40765239_40767465_40767691_40769415_40769504_40771718_40771864_40775409_40775504_40777444_40777587_40798062
transcript_112019.nic	chr5	-	789	4	ISM	ENSG00000132356.12	ENST00000354209.7	1918	10	176	11786	-9	2460	5prime_fragment	FALSE	canonical	3	12	junction_1	64.0277717522292	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCTGCCTGGAGAA	-40798187	False	NA	NA	False	NA	NA	NA	40798198	40774555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_40774973_40775409_40775504_40777444_40777587_40798062
transcript_112020.nnic	chr5	-	724	4	NNC	ENSG00000132356.12	novel	1918	10	NA	NA	-9	2460	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	73.0722625594388	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCTGCCTGGAGAA	-40798187	False	NA	NA	False	NA	NA	NA	40798198	40774555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_40774973_40775409_40775504_40777509_40777587_40798062
transcript_112022.nic	chr5	-	1226	3	ISM	ENSG00000132356.12	ENST00000296800.4	1134	6	-24	6171	-9	2460	5prime_fragment	FALSE	canonical	3	104	junction_1	32	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATTCTGCCTGGAGAA	-40798187	False	NA	NA	False	NA	NA	NA	40798198	40774555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_40775504_40777444_40777587_40798062
transcript_112023.nnic	chr5	-	1159	3	NNC	ENSG00000132356.12	novel	692	5	NA	NA	-9	2458	intron_retention	FALSE	canonical	3	14	junction_1	77	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATTCTGCCTGGAG	-40798187	False	NA	NA	False	NA	NA	NA	40798198	40774557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_40775504_40777509_40777587_40798062
transcript_112024.known	chr5	-	425	3	FSM	ENSG00000132356.12	ENST00000397006.2	425	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	83.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCCTGTAATACCAGCTAC	-40794965	True	NA	NA	False	AGTAAA	-31	NA	40798170	40777159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40777335_40777444_40777587_40798062
transcript_112025.known	chr5	-	668	2	FSM	ENSG00000132356.12	ENST00000511248.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTTCCCATTCATGTAT	-40798148	False	NA	NA	False	AATAAA	-2	NA	40798159	40777015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40777587_40798062
transcript_112034.known	chr5	-	505	4	FSM	ENSG00000145592.14	ENST00000504562.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_3	5586.3196192922	47401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATCTGGTTTTGGTAA	-40714307	True	NA	-35	True	AATAAA	-19	NA	40835186	40832457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835018
transcript_112040.known	chr5	-	7573	4	FSM	ENSG00000145592.14	ENST00000274242.10	7573	4	0	0	0	0	multi-exon	FALSE	canonical	3	8653	junction_3	1841.34859998499	83150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTACTTTTGCAGCAAATT	-40714343	True	NA	NA	False	AATAAA	-18	NA	40835222	40825261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40834180_40834266_40834470_40834607_40835182
transcript_112041.known	chr5	-	637	3	FSM	ENSG00000145592.14	ENST00000509877.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4326.5	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGTCACATAGAGCTT	-40714333	True	NA	NA	False	NA	NA	NA	40835212	40832102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40834470_40834607_40835182
transcript_112042.known	chr5	-	425	4	FSM	ENSG00000145592.14	ENST00000507642.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	5968.18567256601	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGGTAAGGTATTTTTA	-40834558	False	120879	-25	True	AATAAA	-29	NA	40834607	40832447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_40832574_40833960_40834038_40834180_40834266_40834470
transcript_112043.nnic	chr5	+	676	4	NNC	ENSG00000112936.19	novel	398	2	NA	NA	-607	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	0.942809041582063	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGCTATTTCTGGTTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	40933715	40937487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_40933852_40934324_40934467_40936337_40936486_40937237
transcript_112044.known	chr5	-	3294	17	FSM	ENSG00000083720.13	ENST00000196371.10	3294	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_8	14.5021550122732	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTGACTGTCCTTT	-41866648	True	NA	-4	True	AATAAA	-18	NA	41870425	41730064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_41731771_41739389_41739492_41749526_41749608_41762110_41762201_41794002_41794079_41794676_41794750_41801021_41801071_41803068_41803164_41805566_41805682_41807330_41807439_41840450_41840512_41842674_41842782_41850029_41850180_41853418_41853555_41861313_41861405_41862641_41862751_41870280
transcript_112053.nnic	chr5	-	310	2	NNC	ENSG00000083720.13	novel	3294	17	NA	NA	0	-117463	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGTGTGGTCTGTAA	-41866648	True	NA	NA	False	AATAAA	-28	NA	41870425	41867063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_41867229_41870280
transcript_112055.known	chr5	+	5246	6	FSM	ENSG00000205765.10	ENST00000381647.7	5246	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	15.8316139417306	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTGTTTTATATT	41900159	True	NA	4	True	AATAAA	-15	NA	41904343	41921636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41904468_41907735_41907843_41909745_41909893_41911047_41911180_41912068_41912184_41917015
transcript_112060.nnic	chr5	+	365	2	NNC	ENSG00000205765.10	novel	637	4	NA	NA	-28	-6391	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTAAGATGAATGATAAC	41900131	True	NA	10	True	AATAAA	-20	NA	41904315	41904788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_41904468_41904575
transcript_112062.known	chr5	+	1655	7	FSM	ENSG00000151876.13	ENST00000281623.8	1655	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.57043640026736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTGGAATTGCATTTAA	41925175	True	NA	NA	False	AATAAA	-24	NA	41925280	41941743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41939440_41939617_41941191
transcript_112063.known	chr5	+	1284	6	FSM	ENSG00000151876.13	ENST00000509134.1	1284	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.95959179422654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTGTGCCTCTCATTCC	41925195	True	NA	NA	False	ATTAAA	-14	NA	41925300	41941568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_41925499_41927012_41927249_41929696_41929918_41933945_41934022_41934132_41934309_41941191
transcript_112074.known	chr5	+	3493	9	FSM	ENSG00000198865.10	ENST00000361970.10	3493	9	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	20.0124960961895	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGTACTTTATTTGG	42754115	True	NA	6	True	ATTAAA	-17	NA	42756817	42802439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828_42796957_42799374_42799459_42799658
transcript_112084.nic	chr5	+	628	7	ISM	ENSG00000198865.10	ENST00000361970.10	3493	9	-30	5513	-30	-3425	5prime_fragment	FALSE	canonical	3	175	junction_1	22.9812725689612	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAATGAAATAATCAAGCT	42754085	True	NA	NA	False	AAAAAG	-6	NA	42756787	42796926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42779457_42779523_42783473_42783577_42796828
transcript_112086.known	chr5	+	1237	7	FSM	ENSG00000198865.10	ENST00000388827.4	1237	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.7700965862001	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATGGAAAGCATGTC	42754115	True	NA	-8	True	AGTAAA	-2	NA	42756817	42800351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_42756886_42759119_42759209_42762442_42762549_42769596_42769666_42796828_42796957_42799374_42799459_42799658
transcript_112089.known	chr5	-	787	6	FSM	ENSG00000250722.6	ENST00000510965.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	75.6639940790863	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCACAATCATGGACATCAG	-42811605	True	NA	NA	False	GATAAA	-41	NA	42811893	42801237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42810690_42810779_42811835
transcript_112091.known	chr5	-	1853	6	FSM	ENSG00000250722.6	ENST00000511224.5	1853	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.1193799239064	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTCTTCTAAAACTTGAG	-42811604	True	NA	NA	False	AATAAA	-34	NA	42811892	42800111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42809759_42809789_42811835
transcript_112094.known	chr5	-	2056	5	FSM	ENSG00000250722.6	ENST00000514985.6	2056	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	40.1154583670684	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTTTGTTATGTAGGCT	-42811604	True	NA	1	True	AATAAA	-24	NA	42811892	42799879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42801332_42804655_42804774_42806895_42807109_42808150_42808367_42811835
transcript_1121.nnic	chr1	-	835	3	NIC	ENSG00000178821.13	novel	935	5	NA	NA	130	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	36	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	-1919115	False	NA	-9	True	AATAAA	-17	NA	1919128	1917590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1918163_1918252_1918432_1919044
transcript_112101.known	chr5	-	799	3	FSM	ENSG00000250722.6	ENST00000506078.5	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	4.5	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTCTGTATGTGTTTGT	-42811604	True	NA	NA	False	NA	NA	NA	42811892	42806582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_42807109_42808150_42808367_42811835
transcript_112104.known	chr5	+	2599	8	FSM	ENSG00000172262.12	ENST00000510026.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	60.8661965096475	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACACCCATGTGCCTTCT	43120474	True	NA	NA	False	NA	NA	NA	43120917	43175734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161614_43161708_43161932_43173317_43173449_43174446
transcript_112107.known	chr5	+	2400	8	FSM	ENSG00000172262.12	ENST00000306938.8	2400	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	51.6965241795316	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCCAC	43119645	True	NA	NA	False	NA	NA	NA	43121539	43175719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121569_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_11211.known	chr1	-	2120	13	FSM	ENSG00000176444.19	ENST00000355560.4	2120	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	108.348845043324	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273482	155262873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269714_155270807_155270978_155273200
transcript_112110.known	chr5	+	3209	8	FSM	ENSG00000172262.12	ENST00000505606.6	3209	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	42.8652373308322	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATGACTCTTTTTTAAAA	43119701	True	NA	23	True	AGTAAA	-16	NA	43121595	43176324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121829_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_112113.known	chr5	+	3286	7	FSM	ENSG00000172262.12	ENST00000682664.1	3286	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	50.3534727920748	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATGACTCTTTTTTAA	43120470	True	NA	21	True	AGTAAA	-14	NA	43120913	43176322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161932_43173317_43173449_43174446
transcript_112117.known	chr5	+	1352	6	FSM	ENSG00000172262.12	ENST00000507218.5	1352	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.0626405077786	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCAGGTGGATTCAGCAC	43119641	True	NA	NA	False	NA	NA	NA	43121535	43174715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43161248_43161932_43173317_43173449_43174446
transcript_112118.known	chr5	+	1050	6	FSM	ENSG00000172262.12	ENST00000515326.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	45.561387160621	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGCGCATGGAAACAGC	43120869	False	NA	NA	False	AATAAA	-12	NA	43120882	43161773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121124_43122038_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708
transcript_112119.known	chr5	+	501	5	FSM	ENSG00000172262.12	ENST00000508259.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	61.5589148702282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATCACTGAGTCATTGC	43119638	True	NA	NA	False	AAAAAG	-22	NA	43121532	43161332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121569_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_11212.known	chr1	-	1934	13	FSM	ENSG00000176444.19	ENST00000361168.9	1934	13	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_10	93.5096548788175	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	NA	False	NA	-7	True	AATAAA	-25	NA	155273287	155262867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268793_155269487_155269717_155270807_155270978_155273200
transcript_112122.known	chr5	+	572	5	FSM	ENSG00000172262.12	ENST00000509341.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	55.1741560877917	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATGAGGCCAAAAAAAGGAA	43119789	False	NA	NA	False	AAGAAA	-36	NA	43121683	43161294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43121829_43122043_43122178_43123208_43123311_43139164_43139310_43161248
transcript_112129.nnic	chr5	+	895	4	NNC	ENSG00000172262.12	novel	3209	8	NA	NA	27	12014	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	55.1502996869061	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAATGAATTGGAGACT	43119672	True	NA	NA	False	CATAAA	-12	NA	43121566	43137060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_43121829_43122038_43122178_43123208_43123311_43136668
transcript_11213.known	chr1	-	2154	13	FSM	ENSG00000176444.19	ENST00000368361.9	2154	13	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_10	67.2063055077424	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGAGTTGGAGGTTTG	NA	False	NA	-7	True	AATAAA	-25	NA	155273504	155262867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155268707_155268796_155269487_155269717_155270807_155270978_155273200
transcript_112132.known	chr5	+	750	3	FSM	ENSG00000172262.12	ENST00000503599.5	750	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGACTCTGTCTCTAA	43065135	False	NA	NA	False	NA	NA	NA	43065175	43080343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43065234_43067969_43068218_43079899
transcript_112134.nnic	chr5	+	1498	3	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-588	4	intron_retention	FALSE	canonical	3	8	junction_2	5.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCTAAGCGTCCTTTAA	43066850	False	NA	NA	False	TATAAA	-25	NA	43066992	43080507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_43067635_43067969_43068218_43079899
transcript_112140.nnic	chr5	+	1728	2	NNC	ENSG00000172262.12	novel	990	3	NA	NA	-588	-11288	intron_retention	FALSE	canonical	3	19	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTTGGATATTT	43066850	False	NA	NA	False	ATTAAA	-18	NA	43066992	43069055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_43067635_43067969
transcript_112142.known	chr5	+	3340	7	FSM	ENSG00000172262.12	ENST00000509634.5	3340	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_4	29.4604254325471	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAATATGCTATTTTTTT	43119703	True	NA	16	True	AATAAA	-17	NA	43121597	43176247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43122178_43123208_43123311_43139164_43139310_43161248_43161607_43161708_43161932_43173317_43173449_43174446
transcript_112143.known	chr5	+	1927	2	FSM	ENSG00000172262.12	ENST00000510037.1	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAGTTTATCATATTGAAT	43122051	False	NA	NA	False	NA	NA	NA	43122088	43125046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43122178_43123208
transcript_112144.known	chr5	+	970	3	FSM	ENSG00000172262.12	ENST00000509931.5	970	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGACCAATATGCTATTTT	43122001	False	NA	13	True	AATAAA	-14	NA	43122038	43176244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43122178_43123208_43123251_43175455
transcript_112145.known	chr5	-	646	3	FSM	ENSG00000177738.5	ENST00000503152.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATTTATTTATTTATT	-43067309	True	NA	-1	True	GATAAA	-40	NA	43067452	43014730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43015151_43067086_43067158_43067297
transcript_112146.known	chr5	-	2388	2	FSM	ENSG00000177738.5	ENST00000314957.3	2388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAAATATTAACCCAAGG	-43018675	True	NA	NA	False	NA	NA	NA	43018724	43014413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43015151_43017073
transcript_112147.known	chr5	+	920	1	FSM	ENSG00000272382.1	ENST00000607830.1	920	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGTTGCCTGTGTTCCT	NA	False	NA	NA	False	AATAAA	-20	NA	43033715	43034635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43033700_43034600
transcript_112148.known	chr5	-	949	1	FSM	ENSG00000177721.5	ENST00000616064.2	949	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTGCTGGTTGTCAGT	NA	False	NA	NA	False	AATAAA	-18	NA	43040319	43039370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43039400_43040300
transcript_112149.known	chr5	-	768	2	FSM	ENSG00000177738.5	ENST00000665537.1	768	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATTTATTTATTTA	-43067293	True	NA	-3	True	GATAAA	-38	NA	43067436	43014732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43015151_43067086
transcript_11215.known	chr1	-	1885	12	FSM	ENSG00000176444.19	ENST00000476983.5	1885	12	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	110.063167437823	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCATCCCTGGAGTTGGA	NA	False	NA	-13	True	AATAAA	-19	NA	155273329	155262873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155263401_155263949_155264041_155264220_155264301_155264467_155264551_155264644_155264775_155265859_155265955_155266728_155266896_155268009_155268127_155268292_155268360_155269487_155269717_155270807_155270978_155273200
transcript_112151.known	chr5	-	3466	10	FSM	ENSG00000112972.15	ENST00000433297.2	3466	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	38.4682007525151	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACTTGAGTATTCTTTTT	-43313499	False	NA	-11	True	AATAAA	-20	NA	43313512	43289394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43313355
transcript_112152.known	chr5	+	643	2	FSM	ENSG00000261604.1	ENST00000569313.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAACATCATGCATACAAA	NA	False	NA	NA	False	TTTAAA	-3	NA	43289394	43290839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43289666_43290467
transcript_112153.known	chr5	-	5350	11	FSM	ENSG00000112972.15	ENST00000325110.11	5350	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	50.715283692394	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTCTCAGGCTCTGT	-43278085	True	NA	-5	True	AATAAA	-15	NA	43313412	43287469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43291221_43292473_43292638_43292847_43292974_43294055_43294163_43294690_43294862_43295751_43295918_43297001_43297167_43298008_43298135_43298517_43298976_43307765_43307825_43313355
transcript_112154.nnic	chr5	-	757	4	NNC	ENSG00000151882.11	novel	1342	4	NA	NA	96	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.98887651569859	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCTGTCTCAATGTATC	-43396886	True	NA	-3	True	ATTAAA	-15	NA	43397168	43376644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_43376889_43381800_43382053_43388349_43388477_43397034
transcript_112156.known	chr5	-	1518	3	FSM	ENSG00000151882.11	ENST00000513525.1	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAATTGTTATTTTTCTT	-43396982	True	NA	NA	False	NA	NA	NA	43397264	43380891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43382053_43388349_43388477_43397034
transcript_112167.known	chr5	-	736	4	FSM	ENSG00000151881.15	ENST00000506860.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	32.2593655651606	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCTGGCTTTATGTAAT	-43482518	True	NA	NA	False	NA	NA	NA	43483857	43446341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43453657_43454044_43479889_43479988_43483821
transcript_112171.known	chr5	-	1927	4	FSM	ENSG00000151881.15	ENST00000512085.5	1927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	35.6121078036982	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTAGGAAATTTGCTTTT	-43482552	True	NA	89	True	AATAAA	-1	NA	43483891	43445237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43453657_43454044_43454454_43454606_43483821
transcript_112179.known	chr5	-	2736	3	FSM	ENSG00000151881.15	ENST00000397080.8	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	10	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTTGTCATAACT	-43482526	True	NA	NA	False	AATAAA	-35	NA	43483865	43444251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446558_43453657_43454044_43483821
transcript_112180.known	chr5	-	629	3	FSM	ENSG00000151881.15	ENST00000511525.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCCATTTCCTAATGAA	-43482554	True	NA	NA	False	AATATA	-9	NA	43483893	43445892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43446272_43446379_43446558_43483821
transcript_112185.nic	chr5	-	1794	2	NIC	ENSG00000151881.15	novel	629	3	NA	NA	-493	-91	intron_retention	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTTGTTTATATACTAT	-43484276	True	NA	-2	True	ATTAAA	-17	NA	43484386	43445328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_43446558_43483821
transcript_112186.nic	chr5	-	720	2	ISM	ENSG00000151881.15	ENST00000506860.1	736	4	-38	33000	-2	-33000	5prime_fragment	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATGATTACATTTGTAAG	-43482556	True	NA	NA	False	AAAAAG	-9	NA	43483895	43479341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_43479988_43483821
transcript_112189.known	chr5	-	2502	13	FSM	ENSG00000172244.9	ENST00000306862.7	2502	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	23.7327422679208	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	-43513455	True	NA	-9	True	AATAAA	-15	NA	43515148	43486708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43509144_43509376_43514805
transcript_112190.nic	chr5	-	2278	12	NIC	ENSG00000172244.9	novel	2502	13	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_11	16.3530268636514	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACGTTTCACATTTAATTC	-43513462	True	NA	-9	True	AATAAA	-15	NA	43515155	43486708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_43487112_43487908_43487950_43490630_43490730_43492214_43492310_43492719_43492891_43493542_43493613_43494509_43494602_43502371_43502496_43503664_43503761_43505747_43506395_43508576_43508667_43514805
transcript_112199.nic	chr5	-	1523	4	ISM	ENSG00000172244.9	ENST00000306862.7	2502	13	-14	18841	-14	0	5prime_fragment	FALSE	canonical	0	0	junction_3	38.6120303647566	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGACTCTACACTAGATA	-43513469	True	NA	NA	False	NA	NA	NA	43515162	43505549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_43506395_43508576_43508667_43509144_43509376_43514805
transcript_112200.nic	chr5	-	1204	4	ISM	ENSG00000172244.9	ENST00000306862.7	2502	13	-14	19160	-14	-319	5prime_fragment	FALSE	canonical	0	0	junction_3	38.6120303647566	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGCACATATAACTCAG	-43513469	True	NA	-14	True	AATAAA	-20	NA	43515162	43505868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_43506395_43508576_43508667_43509144_43509376_43514805
transcript_112201.known	chr5	-	1208	3	FSM	ENSG00000172244.9	ENST00000514462.1	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	30.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTGACTCTACACTAGATA	-43513385	True	NA	NA	False	NA	NA	NA	43515078	43505549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43506395_43508576_43508667_43514805
transcript_112206.nic	chr5	-	1696	11	NIC	ENSG00000172239.14	novel	1814	11	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_10	344.958388794939	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGTTGGTTAGATGCTTA	-43556399	False	NA	0	True	AATAAA	-36	NA	43556440	43527092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556202
transcript_112208.known	chr5	-	2780	11	FSM	ENSG00000172239.14	ENST00000306846.8	2780	11	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_10	170.854938471207	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAAGTAGCATCTGGT	-43548130	True	NA	0	True	AATAAA	-25	NA	43557077	43526266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556581
transcript_112209.known	chr5	-	1734	11	FSM	ENSG00000172239.14	ENST00000436644.6	1734	11	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_10	241.632448152147	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTTGGTTAGATGCTTAT	-43548146	True	NA	1	True	AATAAA	-37	NA	43557093	43527091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43527470_43529785_43529880_43533737_43533793_43534852_43534971_43535533_43535641_43536818_43536945_43538923_43539036_43543003_43543117_43547727_43547914_43555829_43556000_43556818
transcript_112223.known	chr5	+	6421	22	FSM	ENSG00000112992.18	ENST00000344920.9	6421	22	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_1	19.0224834152496	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTATAAGTTTTTAC	43602365	True	NA	NA	False	AATAAA	-20	NA	43603179	43707396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43603295_43609142_43609347_43612907_43613138_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017_43653214_43655839_43656074_43656652_43656814_43659170_43659351_43675510_43675671_43677724_43677807_43700118_43700238_43702620_43702737_43704254
transcript_112226.known	chr5	+	3902	14	FSM	ENSG00000112992.18	ENST00000657172.1	3902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.1346544488363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTTGGAAGTATGCTT	43602381	True	NA	NA	False	AATAAA	-15	NA	43603195	43654560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_43603295_43609142_43609347_43612907_43613482_43615847_43616066_43619031_43619120_43624031_43624121_43628199_43628388_43644191_43644326_43644610_43644803_43645356_43645511_43649146_43649309_43650476_43650588_43651738_43651885_43653017
transcript_112230.nnic	chr5	-	920	4	NNC	ENSG00000248092.8	novel	4803	3	NA	NA	-3	-92	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.31245915016974	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGAGTCCTAGTCCAT	NA	False	NA	-1	True	ATTAAA	-19	NA	43603179	43571685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_43571972_43572779_43572912_43583466_43583567_43602777
transcript_112231.nnic	chr5	-	946	4	NNC	ENSG00000248092.8	novel	4803	3	NA	NA	-3	-92	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3.55902608401044	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGAGTCCTAGTCCAT	NA	False	NA	-1	True	ATTAAA	-19	NA	43603179	43571685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_43571998_43572779_43572912_43583466_43583567_43602777
transcript_112237.known	chr5	-	4803	3	FSM	ENSG00000248092.8	ENST00000513560.7	4803	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAAAAGATATAAAATG	-43602735	True	NA	-36	True	NA	NA	NA	43603138	43571593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43575936_43583466_43583567_43602777
transcript_112238.known	chr5	-	557	2	FSM	ENSG00000248092.8	ENST00000515466.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGTGAAACCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	43603176	43575777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_43575936_43602777
transcript_112250.known	chr5	-	692	5	FSM	ENSG00000251141.6	ENST00000505401.1	692	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	5.70087712549569	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATGCAAAACATCAAGAGAA	-44808363	True	NA	NA	False	NA	NA	NA	44808726	44777065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44777329_44777908_44777993_44785048_44785182_44786825_44786953_44808641
transcript_112254.known	chr5	-	659	4	FSM	ENSG00000251141.6	ENST00000514597.5	659	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATTAACTATCTCA	-44808379	True	NA	NA	False	NA	NA	NA	44808742	44745008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44745405_44745941_44746039_44777036_44777102_44808641
transcript_112258.nnic	chr5	-	488	4	NIC	ENSG00000251141.6	novel	692	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	6.94422221866655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	-44808430	True	NA	3	True	ATTAAA	-20	NA	44808793	44777203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_44777329_44777908_44777993_44786825_44786953_44808641
transcript_11226.known	chr1	+	1417	11	FSM	ENSG00000160752.15	ENST00000368356.9	1417	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	960.212273406251	4252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287312	True	NA	27	True	AATAAA	-16	NA	155308865	155320665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_112260.nnic	chr5	-	537	4	NIC	ENSG00000251141.6	novel	692	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	6.84754619472471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	-44808430	True	NA	3	True	ATTAAA	-20	NA	44808793	44777203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_44777329_44785048_44785182_44786825_44786953_44808641
transcript_112261.known	chr5	-	468	3	FSM	ENSG00000251141.6	ENST00000505302.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCATTTACTACATACCA	-44808378	True	NA	NA	False	NA	NA	NA	44808741	44745137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44745409_44745941_44746039_44808641
transcript_112266.known	chr5	-	572	3	FSM	ENSG00000251141.6	ENST00000508123.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCAAACTCCTCAACCAAC	-44808303	True	NA	NA	False	AGTAAA	-35	NA	44808666	44775693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44776176_44777036_44777102_44808641
transcript_112267.known	chr5	-	775	3	FSM	ENSG00000251141.6	ENST00000503179.5	775	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTAGAATTTATAGCACC	-44808396	True	NA	NA	False	AAGAAA	-14	NA	44808759	44776755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44777329_44777908_44777993_44808641
transcript_112268.nnic	chr5	-	404	3	NIC	ENSG00000251141.6	novel	692	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	7	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	-44808430	True	NA	3	True	ATTAAA	-20	NA	44808793	44777203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_44777329_44786825_44786953_44808641
transcript_112270.known	chr5	-	220	2	FSM	ENSG00000251141.6	ENST00000505637.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGATTAAACTCTGCT	-44808373	True	NA	3	True	ATTAAA	-20	NA	44808736	44777203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_44777329_44808641
transcript_112275.known	chr5	+	1648	5	FSM	ENSG00000112996.11	ENST00000507110.6	1648	5	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_3	34.662660024874	755	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGTAATTAAAAGAACCC	44800267	True	NA	12	True	AATAAA	-17	NA	44808946	44815514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_44809564_44811008_44811155_44811914_44812021_44813105_44813283_44814912
transcript_112279.known	chr5	-	4202	9	FSM	ENSG00000170571.12	ENST00000303221.10	4202	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	21.065003560408	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGCTTCTTTTACTTT	-50435550	True	NA	0	True	AATAAA	-25	NA	50441288	50396191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411384_50428143_50428228_50441039
transcript_112286.known	chr5	-	1617	9	FSM	ENSG00000170571.12	ENST00000508934.5	1617	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	73.4808648560971	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAACTGTGCTTGCTCTA	-50435612	True	NA	-40	True	AATATA	-36	NA	50441350	50398676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50399291_50399858_50399914_50402285_50402320_50403177_50403455_50405724_50405853_50410876_50410966_50411196_50411222_50428143_50428228_50441039
transcript_112287.known	chr5	-	408	1	FSM	ENSG00000271752.1	ENST00000607844.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGGTGATGTTTTGTGG	-50663146	False	NA	NA	False	AATAAA	-21	NA	50663266	50662858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_50662900_50663300
transcript_112289.known	chr5	+	7475	26	FSM	ENSG00000151883.19	ENST00000281631.10	7475	26	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	20.238418910577	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACGGTATATGTGGGCAGT	50666623	False	NA	NA	False	AATAAA	-19	NA	50666636	50846519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147_50763243_50778068_50778130_50778559_50778651_50788522_50788590_50794206_50794333_50794852_50795418_50796981_50797033_50797137_50797234_50815431_50815525_50821212_50821339_50822334_50822401_50824907_50824976_50826754_50826804_50827943_50828057_50828311_50828385_50829891_50829962_50832780_50832855_50833978_50834049_50834930_50835016_50841965
transcript_112294.nic	chr5	+	1092	7	ISM	ENSG00000151883.19	ENST00000514342.6	2384	24	-12	70376	-12	385	5prime_fragment	FALSE	canonical	3	34	junction_1	7.11024300256718	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAACTTTGCACAGTACT	50666240	True	NA	NA	False	NA	NA	NA	50666925	50763646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50760291_50760363_50761820_50761899_50763147
transcript_112295.known	chr5	+	576	6	FSM	ENSG00000151883.19	ENST00000503707.6	576	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	16.9941166289984	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATAAGTATCACTGGTG	50666281	True	NA	NA	False	NA	NA	NA	50666966	50763242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_50667187_50668070_50668126_50750150_50750189_50759642_50759733_50761820_50761899_50763147
transcript_112297.known	chr5	+	4371	3	FSM	ENSG00000152684.11	ENST00000274311.3	4371	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	81.5	446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCTGTTATCAAGAAT	52787331	True	NA	NA	False	AATAAA	-25	NA	52787915	52804044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_52788415_52799884_52801121_52801408
transcript_112298.known	chr5	+	7843	30	FSM	ENSG00000164171.11	ENST00000296585.10	7843	30	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	3.96896401929329	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTACTATTTTTATC	52988703	True	NA	NA	False	AATAAA	-29	NA	52989351	53094779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_52989533_53026747_53026869_53042111_53042222_53045000_53045093_53048362_53048478_53048642_53048771_53051410_53051560_53055537_53055689_53055983_53056150_53058024_53058102_53059873_53060013_53060900_53061047_53062785_53062930_53064911_53065116_53065840_53065978_53067117_53067258_53070108_53070261_53071937_53072049_53072612_53072696_53073117_53073260_53074384_53074478_53075060_53075138_53075220_53075305_53078771_53078875_53080510_53080622_53081591_53081697_53083339_53083454_53086951_53087042_53089945_53090063_53090518
transcript_1123.nnic	chr1	-	695	2	NIC	ENSG00000178821.13	novel	935	5	NA	NA	-218	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTATGTGGGAAGG	-1919002	False	NA	-9	True	AATAAA	-17	NA	1919015	1917590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_1918163_1918892
transcript_112300.known	chr5	-	1251	7	FSM	ENSG00000164172.20	ENST00000510818.6	1251	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	89.4826178030621	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTAAAAAGAGTATTTTCT	-53106672	True	NA	-9	True	AATAAA	-22	NA	53109742	53098070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100488_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_112304.known	chr5	-	4166	7	FSM	ENSG00000164172.20	ENST00000396954.8	4166	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	78.9234861537848	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106687	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109250
transcript_112305.known	chr5	-	3705	7	FSM	ENSG00000164172.20	ENST00000450852.8	3705	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_6	15.334239103682	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106687	True	NA	2	True	AATAAA	-23	NA	53109757	53095678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100535_53101358_53101510_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_112308.known	chr5	-	3568	6	FSM	ENSG00000164172.20	ENST00000361377.8	3568	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	96.2176698948795	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATTTTTTAAGAGCT	-53106701	True	NA	2	True	AATAAA	-23	NA	53109771	53095678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53098668_53100410_53100535_53102096_53102225_53107076_53107222_53108521_53108644_53109711
transcript_112310.known	chr5	+	2367	3	FSM	ENSG00000247796.3	ENST00000502171.2	2367	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATATATTGTACTTGTT	NA	False	NA	NA	False	AATAAA	-19	NA	53109841	53115123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53110149_53112239_53113035_53113858
transcript_112311.known	chr5	+	3137	2	FSM	ENSG00000247796.3	ENST00000499459.2	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	53109739	True	NA	NA	False	AATAAA	-22	NA	53109898	53115126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53110149_53112239
transcript_112314.known	chr5	+	1536	2	FSM	ENSG00000247796.3	ENST00000667672.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATTGTACTTGTTAGT	53109721	True	NA	NA	False	AATAAA	-22	NA	53109880	53115126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53110149_53113858
transcript_112315.known	chr5	+	2299	6	FSM	ENSG00000134363.12	ENST00000256759.8	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	11.7200682591869	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTCAATTCCTGATGAT	53479941	True	NA	12	True	AATAAA	-38	NA	53480628	53487134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53480877_53482879_53483072_53483503_53483723_53484068_53484294_53484996_53485228_53485950
transcript_112319.known	chr5	+	705	4	FSM	ENSG00000134363.12	ENST00000504226.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	33.6683167912439	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAAGAAAAAAAGAA	53483598	False	NA	NA	False	NA	NA	NA	53483610	53486090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53483723_53484068_53484294_53484999_53485228_53485950
transcript_11232.known	chr1	+	1478	11	FSM	ENSG00000160752.15	ENST00000356657.10	1478	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	969.77719090521	4139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287362	True	NA	27	True	AATAAA	-16	NA	155308915	155320665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155309077_155309788_155309966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_112335.known	chr5	+	669	5	FSM	ENSG00000164258.12	ENST00000296684.10	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_4	71.0967650459569	15658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552217	True	NA	25	True	AATAAA	-43	NA	53560638	53683338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53658550_53658625_53683117
transcript_112336.known	chr5	+	559	4	FSM	ENSG00000164258.12	ENST00000506765.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	540.795915500683	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552253	True	NA	25	True	AATAAA	-43	NA	53560674	53683338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53560761_53603451_53603531_53646232_53646406_53683117
transcript_112337.known	chr5	+	833	6	FSM	ENSG00000164258.12	ENST00000506974.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	560.428407559788	1970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATACATTTTGTGGTGTCTA	53552225	True	NA	25	True	AATAAA	-43	NA	53560646	53683338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_53560761_53603451_53603531_53604723_53604896_53646232_53646406_53658550_53658625_53683117
transcript_112338.known	chr5	-	3328	5	FSM	ENSG00000185305.12	ENST00000504924.6	3328	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	10.9630059746403	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTTCAGACTAACTCCT	-54309043	True	NA	-30	True	AATAAA	-16	NA	54310573	53883941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_53886714_54113201_54113411_54154579_54154640_54171783_54171929_54310431
transcript_112342.known	chr5	-	628	4	FSM	ENSG00000185305.12	ENST00000505630.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	7.54247233265651	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATGTAATTAGGA	-54309046	True	NA	NA	False	NA	NA	NA	54310576	54113132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_54113411_54154579_54154640_54171783_54171929_54310431
transcript_112350.known	chr5	+	3422	4	FSM	ENSG00000164294.14	ENST00000506123.5	3422	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	70.153799295231	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156511	True	NA	NA	False	AAAAAG	-22	NA	55160167	55167071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160329_55160397_55160993_55161256_55164054
transcript_112352.known	chr5	+	425	4	FSM	ENSG00000164294.14	ENST00000511617.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.2991731541936	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCAGAGGAGCCCATTGA	55156510	True	NA	NA	False	NA	NA	NA	55160166	55164131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160329_55160397_55161051_55161256_55164054
transcript_112355.known	chr5	+	349	4	FSM	ENSG00000164294.14	ENST00000502733.1	349	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.5673676969177	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTTATGTTAATGGAA	55156517	True	NA	-34	True	NA	NA	NA	55160173	55164686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160329_55160397_55164054_55164180_55164599
transcript_112356.known	chr5	+	3731	3	FSM	ENSG00000164294.14	ENST00000503787.6	3731	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_2	9	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCTGAAAGTTGTATT	55156514	True	NA	6	True	AATAAA	-18	NA	55160170	55167297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160397_55160993_55161256_55164054
transcript_112362.known	chr5	+	1036	3	FSM	ENSG00000164294.14	ENST00000515370.1	1036	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	91	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATATATGTATGCTTG	55156513	True	NA	34	True	AATAAA	-45	NA	55160169	55164754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160993_55161256_55164054
transcript_112369.known	chr5	+	426	2	FSM	ENSG00000164294.14	ENST00000505096.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAATAACTTTAAAAAGAA	55156538	True	NA	NA	False	AATAAA	-17	NA	55160194	55160706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160244_55160329
transcript_112371.known	chr5	+	3245	2	FSM	ENSG00000164294.14	ENST00000296734.6	3245	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCAGGCATCACATGAAAG	55156512	True	NA	NA	False	AAAAAG	-22	NA	55160168	55167071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55160397_55164054
transcript_112374.known	chr5	-	1361	3	FSM	ENSG00000152669.9	ENST00000282572.5	1361	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAAGTGTCTGTCTGC	-55233594	True	NA	NA	False	AATAAA	-20	NA	55233608	55231151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55231861_55232360_55232547_55233142
transcript_112375.known	chr5	-	4450	28	NNC	ENSG00000067248.11	novel	4664	27	NA	NA	20	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	81.7841348844192	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTTGCTCATCGTTGTG	-55303179	True	NA	-3	True	AATAAA	-17	NA	55307674	55256245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_55256488_55256490_55256541_55259847_55259945_55261367_55261500_55262629_55262933_55267137_55267232_55267685_55267823_55269412_55269638_55270411_55270488_55270577_55270707_55272086_55272176_55273292_55273378_55274613_55274732_55274865_55275011_55276265_55276407_55277105_55277283_55281371_55281516_55283202_55283812_55285292_55285417_55285695_55285856_55289263_55289429_55290217_55290345_55294016_55294146_55295378_55295525_55296219_55296350_55297284_55297399_55298590_55298665_55307386
transcript_112376.known	chr5	+	3961	27	FSM	ENSG00000039123.16	ENST00000230640.10	3961	27	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_10	68.86171934052	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAATTAGTTTTTTCA	55303789	True	NA	13	True	AATAAA	-14	NA	55307988	55425579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55308148_55322326_55322465_55324131_55324199_55327715_55327779_55328698_55328812_55340009_55340185_55341680_55341772_55343330_55343456_55344521_55344621_55345093_55345197_55347012_55347145_55349572_55349653_55350918_55351030_55353167_55353270_55358572_55358699_55366724_55366876_55378313_55378487_55379126_55379196_55387973_55388103_55397415_55397527_55400232_55400422_55405424_55405589_55410523_55410630_55414181_55414239_55415969_55416133_55422877_55422983_55424719
transcript_112383.nic	chr5	+	467	2	ISM	ENSG00000039123.16	ENST00000504388.5	590	4	-269	2328	-257	-2328	5prime_fragment	FALSE	canonical	3	440	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAGAGATGTAGATTTCG	NA	False	NA	21	True	NA	NA	NA	55307731	55322377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_55308148_55322326
transcript_112385.nnic	chr5	-	1254	6	NNC	ENSG00000067113.17	novel	1542	6	NA	NA	-16066	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	136.60658842091	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55484327	False	NA	-5	True	ATTAAA	-19	NA	55484356	55424853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55484251
transcript_112387.known	chr5	-	1542	6	FSM	ENSG00000067113.17	ENST00000307259.9	1542	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	65.092549496851	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528535	True	NA	-5	True	ATTAAA	-19	NA	55534964	55424853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55475298_55475451_55534571
transcript_112388.known	chr5	-	1550	6	FSM	ENSG00000067113.17	ENST00000264775.9	1550	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	159.516018004462	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACTTGCAGGCATTTG	-55528540	True	NA	-5	True	ATTAAA	-19	NA	55534969	55424853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55425335_55425862_55426040_55441850_55441909_55467868_55468150_55490959_55491115_55534571
transcript_112396.nic	chr5	-	2806	18	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_15	48.5772669574144	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709466	True	NA	0	True	AATAAA	-29	NA	55712336	55625844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55702738_55702895_55704321_55704435_55711451_55711500_55712216
transcript_1124.known	chr1	+	2385	18	FSM	ENSG00000067606.17	ENST00000378567.8	2385	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	14.4109243452469	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTCTGATGCCTTTTTT	2047401	True	NA	25	True	AATAAA	-20	NA	2050410	2185395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2050702_2055440_2055563_2056483_2056574_2059540_2059592_2135261_2135348_2144209_2144342_2146026_2146109_2148871_2148925_2150789_2150979_2155994_2156093_2169517_2169605_2172054_2172191_2172300_2172389_2173896_2174017_2174753_2174834_2175223_2175314_2184582_2184699_2184921
transcript_11240.known	chr1	+	1178	10	FSM	ENSG00000160752.15	ENST00000467076.5	1178	10	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	488.417196692225	1286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATCGTGTAACCTTCT	155287335	True	NA	9	True	NA	NA	NA	155308888	155320647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_112402.nic	chr5	-	2650	17	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	37.3609400811864	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709466	True	NA	0	True	AATAAA	-29	NA	55712336	55625844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55704321_55704435_55711451_55711500_55712216
transcript_112409.known	chr5	-	2522	16	FSM	ENSG00000177058.12	ENST00000396865.7	2522	16	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	23.3660722701385	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTCTTTTATTTCTA	-55709454	True	NA	-3	True	AATAAA	-26	NA	55712324	55625847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_112414.nic	chr5	-	2483	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_14	41.3114724392879	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709460	True	NA	0	True	AATAAA	-29	NA	55712330	55625844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55712216
transcript_112415.known	chr5	-	2370	15	FSM	ENSG00000177058.12	ENST00000508124.5	2370	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	42.7813615720583	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGTCTAACTCCTCT	-55709445	True	NA	-13	True	AATAAA	-16	NA	55712315	55625857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55652528_55652724_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55697845_55697993_55711451_55711500_55712216
transcript_112418.nnic	chr5	-	2342	15	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_6	35.0136999426434	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709466	True	NA	0	True	AATAAA	-29	NA	55712336	55625844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55649206_55649315_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_112428.nnic	chr5	-	2234	14	NIC	ENSG00000177058.12	novel	2522	16	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_5	44.4092052934175	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCTTTTATTTCTAATC	-55709466	True	NA	0	True	AATAAA	-29	NA	55712336	55625844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_55626660_55627890_55627981_55633753_55633903_55635543_55635658_55645788_55645896_55656714_55656775_55664692_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_112439.nic	chr5	-	1162	8	ISM	ENSG00000177058.12	ENST00000396865.7	2522	16	-12	38582	-3	130	5prime_fragment	FALSE	canonical	3	97	junction_6	26.0258897787474	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATCTTTTAAGTTTGTTT	-55709466	True	NA	NA	False	AATAAA	-18	NA	55712336	55664429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_112440.nic	chr5	-	1032	8	ISM	ENSG00000177058.12	ENST00000396865.7	2522	16	-12	38712	-3	0	5prime_fragment	FALSE	canonical	3	97	junction_6	26.0258897787474	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTATTCAGTTGGCTTT	-55709466	True	NA	NA	False	AATAAA	-33	NA	55712336	55664559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_55664864_55669227_55669322_55669556_55669621_55669757_55669880_55672562_55672696_55697845_55697993_55711451_55711500_55712216
transcript_112444.known	chr5	-	290	3	FSM	ENSG00000177058.12	ENST00000507216.1	290	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	53	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCTACAATATGTTTAT	-55709428	True	NA	NA	False	AATAAA	-25	NA	55712298	55704274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_55704435_55711451_55711500_55712216
transcript_112445.known	chr5	+	2289	2	FSM	ENSG00000227908.4	ENST00000500093.2	2289	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCATCTCACTCTCCT	55995092	True	NA	NA	False	AATAAA	-33	NA	55995166	56003649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_55995555_56001748
transcript_112448.known	chr5	-	438	1	FSM	ENSG00000226221.1	ENST00000450941.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8383	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	-56505060	False	NA	NA	False	AATACA	-33	NA	56505072	56504634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_56504600_56505100
transcript_112449.nnic	chr5	-	688	4	NNC	ENSG00000237705.1	novel	619	4	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGGTTTTCTGGCTGT	-56862215	True	NA	NA	False	AATAAA	-23	NA	56862225	56842015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_56842214_56851989_56852075_56859668_56859914_56862065
transcript_112450.known	chr5	-	619	4	FSM	ENSG00000237705.1	ENST00000415589.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGGTTTTCTGGCTGT	-56862154	True	NA	NA	False	AATAAA	-23	NA	56862164	56842015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_56842214_56851989_56852075_56859668_56859914_56862073
transcript_112452.known	chr5	-	5198	13	FSM	ENSG00000155545.20	ENST00000381213.7	5198	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	13.390502438503	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTGGTTTGTGTGAAT	-56950658	True	NA	-6	True	AATAAA	-16	NA	56952125	56919602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_56923586_56923690_56923834_56923914_56924043_56928766_56928859_56930663_56930746_56933246_56933399_56935427_56935501_56935665_56935752_56937577_56937699_56938882_56939018_56946925_56947072_56950627_56950653_56952093
transcript_112457.known	chr5	+	1396	6	FSM	ENSG00000155542.12	ENST00000285947.5	1396	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.7687117596099	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	56909292	True	NA	NA	False	AGTAAA	-29	NA	56909595	56917348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56909744_56911168_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_112459.nnic	chr5	+	1110	6	NIC	ENSG00000155542.12	novel	1396	6	NA	NA	-17	-166	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	18.4715998224301	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCAATTTTTCTTTTG	56909272	True	NA	NA	False	ATTAAA	-24	NA	56909575	56917182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_56909744_56911308_56911537_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_112461.nic	chr5	+	1143	6	NIC	ENSG00000155542.12	novel	786	5	NA	NA	-24	-166	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	21.3391658693586	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCAATTTTTCTTTTG	56909778	True	NA	NA	False	ATTAAA	-24	NA	56910035	56917182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_56910395_56911041_56911112_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_112469.known	chr5	+	1009	5	FSM	ENSG00000155542.12	ENST00000418299.5	1009	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.7062792408487	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTGTCTATGTATAAT	56909311	True	NA	NA	False	AGTAAA	-29	NA	56909614	56917348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56909744_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_112470.nnic	chr5	+	793	5	NNC	ENSG00000155542.12	novel	1009	5	NA	NA	5	-166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5638586528478	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCAATTTTTCTTTTG	56909297	True	NA	NA	False	ATTAAA	-24	NA	56909600	56917182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_56909744_56913074_56913135_56913873_56913990_56914860_56914967_56916814
transcript_112472.known	chr5	+	786	5	FSM	ENSG00000155542.12	ENST00000463805.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.1349828483488	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGGTTTTCTACTCAGC	56909802	True	NA	NA	False	NA	NA	NA	56910059	56916919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56910395_56913010_56913135_56913873_56913990_56914860_56914967_56916814
transcript_112483.known	chr5	+	571	2	FSM	ENSG00000155542.12	ENST00000498322.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAGTTCAGTAACATACC	56909289	True	NA	NA	False	GATAAA	-1	NA	56909592	56911588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56909744_56911168
transcript_112484.known	chr5	+	417	2	FSM	ENSG00000155542.12	ENST00000423328.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGCTTCCAGAATCTGT	56909847	True	NA	NA	False	AATAAA	-16	NA	56910104	56911295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_56910395_56911168
transcript_112498.nnic	chr5	+	2932	13	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	1	229	junction_7	287.939651759801	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173819	57263085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_112506.known	chr5	+	4683	13	FSM	ENSG00000062194.16	ENST00000424459.7	4683	13	0	0	0	0	multi-exon	FALSE	canonical	1	229	junction_7	275.202185775396	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTATTCTATGCATTAAG	57173801	False	NA	15	True	TATAAA	-21	NA	57173947	57264679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57237112_57237173_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_112510.nnic	chr5	+	2872	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	1	305	junction_1	234.508312774474	201	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCTGTCTTAAAATGTCC	NA	False	NA	20	True	AATAAA	-23	NA	57173819	57263085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_112511.nnic	chr5	+	3374	12	NNC	ENSG00000062194.16	novel	2243	12	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	1	305	junction_1	234.508312774474	177	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	NA	False	NA	21	True	AATAAA	-17	NA	57173819	57263587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_57173927_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_112512.known	chr5	+	4506	12	FSM	ENSG00000062194.16	ENST00000506184.7	4506	12	0	0	0	0	multi-exon	FALSE	canonical	1	328	junction_10	212.2543305246	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATGGTTATTCTATGC	57166235	True	NA	9	True	TATAAA	-15	NA	57174058	57264673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_57174212_57175447_57176401_57214073_57214194_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_112518.known	chr5	+	3310	11	FSM	ENSG00000062194.16	ENST00000514387.6	3310	11	0	0	0	0	multi-exon	FALSE	canonical	1	61	junction_2	299.252000828733	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTTTCTGTAGTGTT	57173902	False	NA	21	True	AATAAA	-17	NA	57174048	57263587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_57174212_57175447_57176401_57230845_57230970_57231097_57231322_57235965_57236033_57246299_57246485_57247074_57247216_57249408_57249577_57250953_57251142_57261179_57261283_57262593
transcript_11252.nnic	chr1	+	1328	10	NIC	ENSG00000160752.15	novel	1478	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	127	junction_1	767.620823320382	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155287335	True	NA	27	True	AATAAA	-16	NA	155308888	155320665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_155309077_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_112533.known	chr5	-	2786	14	FSM	ENSG00000145632.15	ENST00000274289.8	2786	14	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	18.9202624548643	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGTCTCCTGTCTTTAG	-58456901	True	NA	59	True	AATAAA	-20	NA	58460086	58453981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_58454775_58454910_58455022_58455284_58455415_58455538_58455780_58456025_58456156_58456491_58456590_58456944_58457093_58457180_58457380_58457487_58457584_58458083_58458172_58458398_58458529_58458724_58458842_58458984_58459093_58459689
transcript_112541.known	chr5	+	8861	5	FSM	ENSG00000152932.8	ENST00000282878.6	8861	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	18.411952639522	225	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGCCTTAGTCTGAT	58582376	True	NA	13	True	AATAAA	-25	NA	58583074	58859394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_58583233_58617642_58617871_58726001_58726121_58825037_58825163_58851163
transcript_112559.known	chr5	-	2504	11	FSM	ENSG00000035499.13	ENST00000265036.10	2504	11	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_9	32.9028874112896	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCTCGTGTTTCTTTTTTG	-60691618	True	NA	-2	True	AATAAA	-23	NA	60700166	60596911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60597915_60599074_60599261_60603390_60603568_60605689_60605857_60638749_60638891_60642811_60642860_60644744_60644876_60645491_60645620_60647397_60647534_60686961_60687228_60700045
transcript_112560.known	chr5	+	970	2	FSM	ENSG00000287434.1	ENST00000664253.1	970	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGACTTCACTCTCTTG	NA	False	NA	-66	True	AATAAA	-22	NA	60699728	60702010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60700342_60701653
transcript_112562.known	chr5	-	3874	9	FSM	ENSG00000164181.14	ENST00000508821.6	3874	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	8.37779804005802	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTGTATATTTTTCAT	-60843224	True	NA	-1	True	AATAAA	-19	NA	60844269	60751790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60754834_60757508_60757646_60764226_60764333_60766573_60766631_60767822_60767904_60771902_60772094_60787333_60787432_60799179_60799231_60844159
transcript_112568.nnic	chr5	-	593	4	NNC	ENSG00000164181.14	novel	3874	9	NA	NA	0	-17052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3137084989848	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGTCAACTAAACTCCC	-60843229	True	NA	NA	False	TATAAA	-14	NA	60844274	60781312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_60781642_60787333_60787432_60799179_60799231_60844159
transcript_112575.known	chr5	-	2165	13	FSM	ENSG00000049167.16	ENST00000675378.1	2165	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	46.018942355899	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCTGTGTCAACCCACACG	-60943308	True	NA	0	True	AATAAA	-20	NA	60945070	60873831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890272_60890402_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112576.known	chr5	-	2034	13	FSM	ENSG00000049167.16	ENST00000265038.10	2034	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.6374908797156	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATCTGGCTTAAACATGA	-60943302	True	NA	-53	True	NA	NA	NA	60945064	60873884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60896458_60896516_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112577.known	chr5	-	2095	13	FSM	ENSG00000049167.16	ENST00000643034.1	2095	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	43.9686599244912	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTCTGTGTCAACCCACAC	-60943302	True	NA	-1	True	AATAAA	-19	NA	60945064	60873832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924357_60928863_60928960_60944931
transcript_112578.known	chr5	-	1949	13	FSM	ENSG00000049167.16	ENST00000675452.2	1949	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	43.5987862980917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTTAACTTTGTGAAAA	-60943287	True	NA	NA	False	GGGGCT	-37	NA	60945049	60874036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924430_60928863_60928960_60944931
transcript_112579.known	chr5	-	2236	13	FSM	ENSG00000049167.16	ENST00000381118.7	2236	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	43.7832413398348	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGTGTCAACCCACACGT	-60943289	True	NA	1	True	AATAAA	-21	NA	60945051	60873830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924509_60928863_60928960_60944931
transcript_112581.known	chr5	-	2091	13	FSM	ENSG00000049167.16	ENST00000675042.2	2091	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_12	43.6297553918831	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCCACACGTGATTATCAT	-60943311	True	NA	10	True	AATAAA	-30	NA	60945073	60873821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60932106_60932149_60944931
transcript_112586.known	chr5	-	9414	12	FSM	ENSG00000049167.16	ENST00000676185.1	9414	12	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_2	17.2564516621159	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGCCAATAGAACTTTTT	-60943308	True	NA	NA	False	AATAAA	-30	NA	60945070	60866453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60890888_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112595.known	chr5	-	3672	11	FSM	ENSG00000049167.16	ENST00000682217.1	3672	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.0826048261883	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCTCGTCTCTAAATAAA	-60943308	True	NA	NA	False	NA	NA	NA	60945070	60871997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60887439_60887521_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112600.known	chr5	-	1248	10	FSM	ENSG00000049167.16	ENST00000683199.1	1248	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14.1978958621896	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATACTGTGCAACTT	-60943268	True	NA	NA	False	AATGAA	-3	NA	60945030	60890703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60891087_60898275_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112607.known	chr5	-	3153	9	FSM	ENSG00000049167.16	ENST00000684394.1	3153	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	10.9544511501033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAAAACTCCGTCTCAA	-60943301	True	NA	NA	False	NA	NA	NA	60945063	60896020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60898401_60899626_60899728_60902441_60902509_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112610.known	chr5	-	969	7	FSM	ENSG00000049167.16	ENST00000497892.6	969	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	53.5132382375302	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	-60943300	True	NA	0	True	ATTAAA	-18	NA	60945062	60903359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60924290_60924368_60928863_60928960_60944931
transcript_112616.known	chr5	-	881	6	FSM	ENSG00000049167.16	ENST00000675229.1	881	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	10.2449987798926	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTACTTGTCTCAT	-60943289	True	NA	0	True	ATTAAA	-18	NA	60945051	60903359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112621.known	chr5	-	1073	5	FSM	ENSG00000049167.16	ENST00000682418.1	1073	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	52.8695328142778	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTAGTTTCAGAGCC	-60943302	True	NA	NA	False	NA	NA	NA	60945064	60909339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60909958_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112626.known	chr5	-	1741	10	FSM	ENSG00000049167.16	ENST00000439176.6	1741	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.7417234512085	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATAAAATTTCTATGTT	-60943308	True	NA	-28	True	NA	NA	NA	60945070	60873859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_60874684_60898275_60898401_60899626_60899728_60902441_60902521_60903647_60903717_60904791_60904874_60918264_60918389_60922053_60922156_60928863_60928960_60944931
transcript_112627.known	chr5	+	843	6	FSM	ENSG00000164182.12	ENST00000677756.1	843	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	362.801874306074	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATTTTAACAAATAAAAGAA	60933872	True	NA	-12	True	AATGAA	-40	NA	60945182	61152995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945383_61045523_61045605_61045839_61045979_61073124_61073215_61098991_61099033_61152703
transcript_112633.known	chr5	+	2211	4	FSM	ENSG00000164182.12	ENST00000678452.1	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	308.805224480848	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCATGTGTCTTTATAGTA	60933866	True	NA	NA	False	AATAAA	-8	NA	60945176	61154531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945429_61073124_61073215_61098991_61099033_61152703
transcript_112638.known	chr5	+	586	3	FSM	ENSG00000164182.12	ENST00000511107.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	389.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60933896	True	NA	19	True	AATAAA	-16	NA	60945206	61153026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945429_61098991_61099033_61152703
transcript_112639.known	chr5	+	461	3	FSM	ENSG00000164182.12	ENST00000502658.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	383	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60934024	False	NA	19	True	AATAAA	-16	NA	60945334	61153026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945383_61073124_61073215_61152703
transcript_112640.known	chr5	+	632	4	FSM	ENSG00000164182.12	ENST00000296597.10	632	4	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_2	37.2051370407666	7732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTTGTATTTTCTGAA	60933894	True	NA	19	True	AATAAA	-16	NA	60945204	61153026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_60945383_61073124_61073215_61098991_61099033_61152703
transcript_112642.known	chr5	-	584	4	FSM	ENSG00000188725.8	ENST00000507416.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	241.075829471881	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAAAATCATTTGGAAAAT	-61152505	True	NA	46	True	AAAAAG	-32	NA	61162468	61159921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_61160200_61161087_61161228_61162216_61162360_61162445
transcript_112646.known	chr5	-	2888	3	FSM	ENSG00000188725.8	ENST00000339020.8	2888	3	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	17.5	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATAGTATCCATGATAAC	-61152505	True	NA	1	True	AATAAA	-26	NA	61162468	61157703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_61160200_61161087_61161228_61162216
transcript_112647.nnic	chr5	+	694	2	Genic_Genomic	ENSG00000250461.1	novel	744	1	NA	NA	-55	-66	multi-exon	FALSE	canonical	0	0	junction_1	0	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCATAAGAAACACAGTAA	NA	False	NA	NA	False	AAAAAG	-27	NA	61375056	61375789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_61375420_61375458
transcript_112649.known	chr5	+	7541	20	FSM	ENSG00000068796.19	ENST00000676271.1	7541	20	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	81.8851638296075	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	62302366	True	NA	8	True	AATAAA	-19	NA	62306451	62391025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_112650.known	chr5	+	2539	20	FSM	ENSG00000068796.19	ENST00000401507.7	2539	20	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	35.7945042904092	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTGTCCTTCACCTGA	62305964	False	NA	-36	True	NA	NA	NA	62306161	62385676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_112653.known	chr5	-	2082	12	FSM	ENSG00000086189.11	ENST00000680062.1	2082	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_11	150.85513821966	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTATTGATATTTGGC	-62403608	False	NA	-13	True	AATAAA	-3	NA	62403624	62387964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403450
transcript_112654.known	chr5	-	1581	12	FSM	ENSG00000086189.11	ENST00000681192.1	1581	12	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_11	150.00550954069	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403667
transcript_112655.known	chr5	-	2831	12	FSM	ENSG00000086189.11	ENST00000199320.9	2831	12	0	0	0	0	multi-exon	TRUE	canonical	3	467	junction_1	30.4375800777877	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTACAGCTGCAAGAAAAC	-62398169	True	NA	NA	False	AATAAA	-16	NA	62403905	62387253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_112662.known	chr5	-	1468	11	FSM	ENSG00000086189.11	ENST00000679751.1	1468	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	154.232324757166	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398166	True	NA	-23	True	AGTAAA	-17	NA	62403902	62388526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62403272_62403347_62403693
transcript_112664.known	chr5	-	1518	11	FSM	ENSG00000086189.11	ENST00000681672.1	1518	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	160.213264120047	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62398193	True	NA	-23	True	AGTAAA	-17	NA	62403929	62388526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62390983_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_112669.known	chr5	-	1208	11	FSM	ENSG00000086189.11	ENST00000506390.5	1208	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	159.399780426449	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGGTTGTGAGCCTCAT	-62398162	True	NA	NA	False	AATAAA	-23	NA	62403898	62391716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62392007_62392170_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_112680.known	chr5	+	7901	21	FSM	ENSG00000068796.19	ENST00000674632.1	7901	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	149.536040806222	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTCACCTTGACTCTTT	62304367	True	NA	8	True	AATAAA	-19	NA	62306205	62391025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352654_62353274_62353376_62355158_62355255_62357690_62357746_62358136_62358300_62361241_62361333_62361465_62361530_62362449_62362542_62363177_62363321_62363694_62363900_62365242_62365354_62366413_62366482_62372437_62372552_62373686_62373838_62377660_62377763_62381117_62381254_62385483
transcript_112681.known	chr5	+	1787	6	FSM	ENSG00000068796.19	ENST00000675085.1	1787	6	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_5	38.410415254199	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATTATTTCCTAGAAGAA	62304367	True	NA	NA	False	NA	NA	NA	62306205	62354337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62306537_62347129_62347225_62348047_62348168_62350065_62350121_62352587_62352711_62353274
transcript_112683.known	chr5	-	2784	11	FSM	ENSG00000086189.11	ENST00000680785.1	2784	11	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	31.9231890637511	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTATTTTGGTTCTC	-62403927	False	NA	-23	True	AGTAAA	-17	NA	62403943	62388526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_62389053_62390875_62392235_62392925_62392991_62393954_62394048_62394483_62394608_62398510_62398561_62398645_62398740_62398819_62398882_62402035_62402123_62403272_62403347_62403693
transcript_112684.known	chr5	+	4365	30	FSM	ENSG00000086200.17	ENST00000325324.11	4365	30	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_5	26.7330574658873	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGACTGATTTGTCTGA	62404123	True	NA	13	True	ATTAAA	-19	NA	62412762	62628582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926_62450000_62451729_62451934_62467130_62467264_62470249_62470309_62474415_62474465_62476682_62476754_62483100_62483294_62484009_62484163_62485418_62485463_62487770_62487862_62489301_62489350_62490114_62490221_62493997_62494125_62504666_62504701_62504857_62504899_62506240_62506358_62515387_62515502_62526141_62526258_62530708_62530786_62536701_62536782_62537208_62537290_62550366_62550463_62551222_62551337_62561135_62561258_62591576_62591673_62601763_62601849_62627153
transcript_112688.nic	chr5	+	1180	4	ISM	ENSG00000086200.17	ENST00000325324.11	4365	30	-17	177905	-17	-1186	5prime_fragment	FALSE	canonical	3	245	junction_2	6.64997911442	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCAGAATGGCTTCAGG	62404106	True	NA	NA	False	TTTAAA	-12	NA	62412745	62450677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_62412930_62437273_62437418_62442982_62443084_62449926
transcript_112691.nnic	chr5	-	299	2	NNC	ENSG00000248285.1	novel	219	2	NA	NA	21183	19	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGATGCTTTCTTT	-63959772	False	49	0	True	AATAAA	-20	NA	63959860	63957873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_63958016_63959703
transcript_112692.nnic	chr5	-	1424	2	NNC	ENSG00000248285.1	novel	219	2	NA	NA	19291	19	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGATGCTTTCTTT	-63961664	False	88	0	True	AATAAA	-20	NA	63961752	63957873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_63958016_63960470
transcript_112693.known	chr5	-	4572	1	FSM	ENSG00000178394.5	ENST00000323865.5	4572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGCCTGATGCTTTCTTT	NA	False	NA	0	True	AATAAA	-20	NA	63962445	63957873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_63957900_63962400
transcript_112694.known	chr5	+	4945	8	FSM	ENSG00000164197.12	ENST00000389100.9	4945	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	1.8405855323893	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGAATATGATACTTGT	64165656	True	NA	NA	False	AATAAA	-20	NA	64165842	64372869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360_64217397_64325185_64325412_64330280_64330407_64369614
transcript_112696.known	chr5	+	1727	5	FSM	ENSG00000164197.12	ENST00000296615.10	1727	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.6583123951777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAATTAAAAAAA	64165657	True	NA	NA	False	NA	NA	NA	64165843	64217786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64165954_64200807_64200943_64212064_64212161_64213557_64214518_64217360
transcript_1127.nic	chr1	-	815	5	ISM	ENSG00000162585.17	ENST00000428120.5	2313	8	12	5070	10	0	5prime_fragment	FALSE	canonical	3	145	junction_2	479.152898352916	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181826	True	NA	-5	True	ATTAAA	-40	NA	2194729	2189547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_2189782_2192844_2192976_2193638_2193911_2193997_2194134_2194687
transcript_112740.known	chr5	+	612	4	FSM	ENSG00000145642.12	ENST00000506473.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	84.8384084925899	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGATGATATAATTCAAGAA	64688989	True	NA	NA	False	AATGAA	-14	NA	64690531	64717963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64690815_64694086_64694183_64695506_64695665_64717888
transcript_112755.known	chr5	-	392	4	FSM	ENSG00000153006.16	ENST00000510616.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	170.184866803394	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAATATTTTTTTCCA	-64764649	True	NA	NA	False	AATAAA	-23	NA	64768627	64741056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_64741201_64754314_64754363_64765044_64765122_64768504
transcript_112758.known	chr5	+	772	3	FSM	ENSG00000145642.12	ENST00000389074.6	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	31	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTTTTCCTTTGTATA	64688960	True	NA	119	True	ATTAAA	-16	NA	64690502	64718190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64690815_64695506_64695665_64717888
transcript_11276.known	chr1	+	1196	9	FSM	ENSG00000160752.15	ENST00000611010.4	1196	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	839.139738065121	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTTCTGTTCTTGCTC	155308737	False	NA	28	True	AATAAA	-17	NA	155308747	155320666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_112761.known	chr5	+	532	3	FSM	ENSG00000145642.12	ENST00000513930.1	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	92.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGAAACGGTTTGTAATA	64691255	False	NA	11	True	AATAAA	-13	NA	64691318	64718082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64691499_64695506_64695665_64717888
transcript_112765.nnic	chr5	+	887	2	NIC	ENSG00000145642.12	novel	846	4	NA	NA	-312	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTGTAATATTGCTTTT	64690025	True	NA	19	True	AATAAA	-21	NA	64690129	64718090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_64690815_64717888
transcript_112767.known	chr5	-	6878	5	FSM	ENSG00000153006.16	ENST00000513458.9	6878	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	40.4745290275254	2302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGCTGTGTCTTGCTTTG	-64764713	True	NA	-3	True	AATAAA	-42	NA	64768691	64718147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_64724574_64728106_64728180_64741056_64741201_64754314_64754363_64768504
transcript_112768.known	chr5	+	2065	14	FSM	ENSG00000153015.17	ENST00000381070.8	2065	14	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	54.634666152198	1218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAATATGGATGGGG	64763152	True	NA	NA	False	AATAAA	-20	NA	64768929	65018750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64885442_64885547_64971702_64971813_64977134_64977239_65018158
transcript_112769.known	chr5	+	2103	11	FSM	ENSG00000153015.17	ENST00000508024.2	3867	11	28	1736	0	22	multi-exon	FALSE	canonical	2	3	junction_10	168.895707464696	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTCTCCTCTGGATCT	64763168	True	NA	4	True	AATAAA	-16	NA	64768945	64808562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_64769189_64774690_64774788_64781920_64782034_64783835_64783980_64785480_64785580_64786523_64786628_64788950_64789021_64800247_64800328_64801301_64801333_64804228_64804387_64807598
transcript_112793.known	chr5	-	1586	11	FSM	ENSG00000123219.13	ENST00000508421.5	1586	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_9	92.7028047040649	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTAATCCTCTGTGAAT	-65560025	True	NA	-60	True	NA	NA	NA	65563125	65517819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561462_65561565_65563097
transcript_112797.known	chr5	-	1731	11	FSM	ENSG00000123219.13	ENST00000396679.6	1731	11	0	0	0	0	multi-exon	TRUE	canonical	3	183	junction_9	50.0260931914536	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560068	True	NA	-6	True	AATAAA	-21	NA	65563168	65517765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_112799.known	chr5	-	1697	11	FSM	ENSG00000123219.13	ENST00000514814.5	1697	11	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	83.1724112912449	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTAGTGATGTGGGATA	-65560068	True	NA	-6	True	AATAAA	-21	NA	65563168	65517765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561496_65561565_65563097
transcript_112819.known	chr5	-	1040	10	FSM	ENSG00000123219.13	ENST00000510693.5	1040	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	106.889812885819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTATTATTCATTTTT	-65560045	True	NA	NA	False	NA	NA	NA	65563145	65518334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554947_65561462_65561565_65563097
transcript_112828.known	chr5	-	653	9	FSM	ENSG00000123219.13	ENST00000515497.5	653	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_7	109.444549316081	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTGAGTACCTTGGGC	-65560068	True	NA	NA	False	TATAAA	-15	NA	65563168	65528525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796_65554899_65561496_65561565_65563097
transcript_112847.known	chr5	-	634	2	FSM	ENSG00000123219.13	ENST00000504508.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACAGATTTAAACCTGTAT	-65560036	True	NA	NA	False	TTTAAA	-6	NA	65563136	65560969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65561565_65563097
transcript_112848.known	chr5	-	1124	5	FSM	ENSG00000123219.13	ENST00000510354.1	1124	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	152.123921524526	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCTGCTGACCAGTTGT	-65558464	False	NA	-4	True	AATAAA	-18	NA	65561564	65550466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65551243_65551563_65551637_65552492_65552550_65554796_65554947_65561496
transcript_112849.known	chr5	-	1576	9	FSM	ENSG00000123219.13	ENST00000242872.7	1576	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_6	11.3074919854051	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTATTAGTGATGTGGGAT	-65551865	False	NA	-7	True	AATAAA	-20	NA	65554965	65517766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65518634_65521474_65521529_65528451_65528579_65528918_65529018_65529116_65529200_65542801_65542849_65551563_65551637_65552492_65552550_65554796
transcript_112851.nic	chr5	+	2195	12	NIC	ENSG00000113593.12	novel	2109	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	171.085885347942	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	65558225	True	NA	26	True	ATTAAA	-20	NA	65563286	65587549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_65563507_65567512_65567616_65568917_65568995_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_112853.known	chr5	+	2019	12	FSM	ENSG00000113593.12	ENST00000510930.5	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	159.183920862495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAATACAATATTAA	65558234	True	NA	-81	True	AGTAAA	-26	NA	65563295	65587422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65563507_65563802_65563840_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_112858.known	chr5	+	2109	11	FSM	ENSG00000113593.12	ENST00000261308.10	2109	11	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_4	69.0189104521362	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	65558234	True	NA	26	True	ATTAAA	-20	NA	65563295	65587549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65563507_65567512_65567616_65569631_65569733_65569877_65569999_65571838_65572287_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_11286.known	chr1	+	3436	10	FSM	ENSG00000160753.16	ENST00000368352.10	3436	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	103.675776662954	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155320569	True	NA	29	True	AATAAA	-15	NA	155320893	155331114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_112869.nnic	chr5	+	1342	7	NIC	ENSG00000113593.12	novel	2109	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	174.901321385009	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACTTTTCTCGCAAT	65558228	True	NA	26	True	ATTAAA	-20	NA	65563289	65587549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_65563507_65576878_65577070_65579423_65579614_65583037_65583220_65585013_65585096_65585998_65586182_65587252
transcript_112871.known	chr5	+	838	2	FSM	ENSG00000113593.12	ENST00000508982.1	838	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATGATACTCAAAAAATG	NA	False	NA	NA	False	TATAAA	-33	NA	65563235	65568079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65563507_65567512
transcript_112872.known	chr5	+	8652	13	FSM	ENSG00000123213.23	ENST00000380985.10	8652	13	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	60.165512454303	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTTATAAAGATGCC	65708513	True	NA	NA	False	AATAAA	-20	NA	65722204	65829283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65722415_65758566_65758827_65762959_65763109_65777426_65777535_65780178_65780282_65781260_65781422_65785774_65785911_65788117_65788485_65792453_65792656_65809514_65809702_65810036_65810166_65812254_65812392_65822780
transcript_112876.known	chr5	+	1437	13	FSM	ENSG00000113597.18	ENST00000438419.6	1437	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	41.6842462914815	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGATTTTATCTTGTAA	65623833	True	NA	6	True	ATTAAA	-16	NA	65625033	65664764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_112878.known	chr5	+	2910	13	FSM	ENSG00000113597.18	ENST00000399438.8	2910	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_7	38.3525314244923	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTCTATATTTTAATTA	65623826	True	NA	122	True	AGTAAA	-18	NA	65625026	65666233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65655635_65655654_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_11288.known	chr1	+	3114	10	FSM	ENSG00000160753.16	ENST00000368354.7	3114	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	115.973176975445	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155320571	True	NA	27	True	AATAAA	-13	NA	155320895	155331112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155320992_155321687_155323131_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_112884.known	chr5	+	1410	12	FSM	ENSG00000113597.18	ENST00000505553.5	1410	12	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_10	28.9430903557109	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATTTTATCTTGTAATT	65623844	True	NA	8	True	ATTAAA	-18	NA	65625044	65664766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664233_65664385_65664503
transcript_112886.known	chr5	+	2715	12	FSM	ENSG00000113597.18	ENST00000231526.8	2715	12	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	21.3382828280437	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTCTGTCTTTGTTTC	65623839	True	NA	6	True	AATAAA	-18	NA	65625039	65666069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500_65652546_65658367_65658502_65660698_65660898_65662049_65662151_65664236_65664385_65664503
transcript_112897.known	chr5	-	3863	11	FSM	ENSG00000113595.15	ENST00000231524.14	3863	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	8.15107354892593	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGAAGTCCCATCAT	-65622998	True	NA	-18	True	AATAAA	-13	NA	65624333	65589689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65591949_65594520_65594646_65596420_65596532_65597050_65597181_65604910_65605046_65609242_65609459_65610860_65611044_65611602_65611882_65614097_65614220_65618092_65618256_65624193
transcript_11290.known	chr1	+	1968	9	FSM	ENSG00000160753.16	ENST00000368349.8	1968	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	68.3893951939919	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGTCTTTCACTGTG	155322357	True	NA	27	True	AATAAA	-13	NA	155324512	155331112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324588_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_112902.known	chr5	-	5448	11	FSM	ENSG00000197860.10	ENST00000381007.9	5448	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.0774289116882	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTATTTGATTTAATG	-65718972	True	NA	0	True	AATAAA	-23	NA	65722109	65665927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65685367_65685473_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_112911.nnic	chr5	-	1227	10	NIC	ENSG00000197860.10	novel	5448	11	NA	NA	-10	-4126	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	13.833221775543	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAACATAACATGACTC	-65718982	True	NA	-10	True	AATAAA	-33	NA	65722119	65670053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_65670358_65671914_65671999_65672243_65672282_65680493_65680557_65680655_65680795_65704278_65704379_65708488_65708559_65712960_65713065_65720707_65720830_65721916
transcript_112914.known	chr5	+	729	7	FSM	ENSG00000113597.18	ENST00000508304.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	18.2338208344335	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCAATGTGTCTTGATTTT	65623868	False	NA	NA	False	NA	NA	NA	65625068	65652736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695_65637781_65647054_65647183_65650809_65650883_65652500
transcript_112917.nic	chr5	+	965	4	ISM	ENSG00000113597.18	ENST00000508304.5	729	7	-317	14600	-252	-14600	5prime_fragment	FALSE	canonical	3	137	junction_3	14.1656862405839	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAAGGTTTTTTTATA	65624708	False	NA	NA	False	NA	NA	NA	65624751	65638136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_65625107_65635300_65635370_65635943_65636044_65637695
transcript_112919.known	chr5	+	1541	2	FSM	ENSG00000253251.3	ENST00000510585.3	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATAGTTAGTGCTAATTAT	65623826	True	NA	NA	False	AATACA	-17	NA	65625026	65630928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_65625107_65629467
transcript_112920.known	chr5	+	6699	12	FSM	ENSG00000153914.16	ENST00000334121.11	6699	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_5	22.0671402244593	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTGTTGAGTAGTAATT	66138863	True	NA	19	True	AATAAA	-20	NA	66144299	66183615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584_66170948_66174945_66175042_66177513_66177659_66178718
transcript_112928.nic	chr5	+	1523	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	12800	-12	0	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAACAGGACAAAGAAAAGG	66138769	True	NA	-1	True	AAAAAG	-35	NA	66144205	66170815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_112929.nic	chr5	+	1586	9	ISM	ENSG00000153914.16	ENST00000334121.11	6699	12	-94	12737	-12	63	5prime_fragment	FALSE	canonical	3	144	junction_5	18.1107702762748	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGATAAAAAATCCAGAA	66138769	True	NA	-45	True	AAAAAG	-32	NA	66144205	66170878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_66144538_66153462_66153597_66159218_66159335_66162108_66162274_66162413_66162593_66163791_66163923_66164782_66164898_66170050_66170171_66170584
transcript_112930.known	chr5	+	507	4	FSM	ENSG00000069020.19	ENST00000452953.5	507	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCTGTCTTGAATTATT	NA	False	NA	NA	False	AATAAA	-18	NA	66759727	66930961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_66759863_66788669_66788795_66899950_66899983_66930746
transcript_112935.known	chr5	+	559	3	FSM	ENSG00000069020.19	ENST00000407621.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTCCTTTCCAGTAC	NA	False	NA	NA	False	AATAAA	-17	NA	66958896	66986523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_66959295_66963706_66963788_66986443
transcript_112939.known	chr5	-	777	2	FSM	ENSG00000229666.2	ENST00000451496.2	904	2	127	0	127	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGGAACCAGAATGAATTA	-67003834	False	NA	NA	False	AATAAA	-16	NA	67003953	67001382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_67002050_67003843
transcript_112950.known	chr5	-	676	1	FSM	ENSG00000213864.3	ENST00000519625.1	676	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATTATGGC	NA	False	NA	NA	False	NA	NA	NA	68159893	68159217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_68159200_68159900
transcript_112951.known	chr5	+	2625	10	FSM	ENSG00000145675.15	ENST00000320694.12	2625	10	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	12.0185042515466	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTTCAGAATTAAAACTA	NA	False	NA	NA	False	AGTAAA	-29	NA	68288367	68298583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_68288752_68292258_68292362_68293100_68293200_68293302_68293484_68293708_68293835_68294535_68294679_68295147_68295325_68295419_68295489_68296170_68296342_68297411
transcript_112959.known	chr5	+	1317	4	FSM	ENSG00000145740.20	ENST00000380860.8	1317	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	50.6907837338855	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTTGTATTTCTTCA	69089534	True	NA	13	True	AATAAA	-16	NA	69093990	69104740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69094339_69100806_69100930_69103061_69103129_69103961
transcript_112960.known	chr5	+	681	3	FSM	ENSG00000145740.20	ENST00000502979.1	681	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	36.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCGGCCCAGAATAAGAATA	69094174	False	NA	NA	False	NA	NA	NA	69094197	69104434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69094339_69103061_69103129_69103961
transcript_112969.known	chr5	+	2029	9	FSM	ENSG00000134057.15	ENST00000256442.10	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	5854	junction_6	208.77436235084	7841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATCTTTTTTAAAAAGTT	69115853	True	NA	16	True	AATAAA	-20	NA	69167149	69178245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238_69177350_69177523
transcript_112970.known	chr5	+	1331	8	FSM	ENSG00000134057.15	ENST00000506572.5	1331	8	0	0	0	0	multi-exon	FALSE	canonical	3	5854	junction_6	153.226256608604	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTGGCATTGTAAGATG	69115838	True	NA	NA	False	NA	NA	NA	69167134	69177358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69167284_69167907_69168079_69168172_69168344_69171269_69171453_69174250_69174410_69174876_69175114_69175396_69175538_69177238
transcript_112971.known	chr5	+	1354	9	FSM	ENSG00000153044.10	ENST00000283006.7	1354	9	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_3	94.5555392348857	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTCTTATTTTTTTTTA	69180062	True	NA	29	True	AATAAA	-15	NA	69189582	69210357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_112977.known	chr5	+	1305	8	FSM	ENSG00000153044.10	ENST00000515001.5	1305	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_4	262.180806906616	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTCTTATTTTTTTTT	69180053	True	NA	28	True	AATAAA	-14	NA	69189573	69210356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_112978.known	chr5	+	692	8	FSM	ENSG00000153044.10	ENST00000502689.1	692	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	300.777495901566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTAGTTATTTGTAGT	69189706	False	NA	18	True	NA	NA	NA	69189741	69209929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69197052_69197110_69202505_69202570_69202918_69202971_69208195_69208360_69209706
transcript_11298.known	chr1	+	2503	9	FSM	ENSG00000160753.16	ENST00000368347.8	2503	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	70.0311314702254	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155323788	False	NA	29	True	AATAAA	-15	NA	155323936	155331114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324545_155324844_155324944_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_112983.known	chr5	+	437	6	FSM	ENSG00000153044.10	ENST00000513575.5	437	6	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_4	332.536073231161	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAACTTACACATTAGGCT	69180071	True	NA	-93	True	AATAAA	-22	NA	69189591	69202569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195751_69197052_69197110_69202505
transcript_112984.nic	chr5	+	651	6	ISM	ENSG00000153044.10	ENST00000283006.7	1354	9	-62	7686	-53	102	5prime_fragment	FALSE	canonical	3	692	junction_3	105.02456855422	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATGATTGGAATTCGCT	69180000	True	NA	9	True	ATTAAA	-19	NA	69189520	69202671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_69189769_69191794_69191851_69194646_69194696_69195716_69195792_69197052_69197110_69202505
transcript_112986.known	chr5	+	724	2	FSM	ENSG00000153044.10	ENST00000510742.1	724	2	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCATTTCTGACATAT	NA	False	NA	-13	True	NA	NA	NA	69207730	69209801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69208360_69209706
transcript_112993.known	chr5	+	1200	4	FSM	ENSG00000134056.12	ENST00000602380.1	1200	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	475.766282491262	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGCATAGGAATAAAGATT	69211959	True	NA	NA	False	AAAAAG	-33	NA	69217831	69229875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69218112_69226337_69226402_69228199_69228388_69229207
transcript_1130.known	chr1	-	811	4	FSM	ENSG00000162585.17	ENST00000400918.7	811	4	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_1	500.79292682261	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTCCCAGCAGCGCCC	-2181848	True	NA	NA	False	NA	NA	NA	2194751	2185174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2185514_2193638_2193911_2193997_2194134_2194687
transcript_113000.known	chr5	+	298	3	FSM	ENSG00000134056.12	ENST00000507022.1	298	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	505	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCTGTTTGTCATCAG	69211913	True	NA	-52	True	NA	NA	NA	69217785	69229231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69217872_69228199_69228388_69229207
transcript_113006.known	chr5	+	1315	4	FSM	ENSG00000134056.12	ENST00000256441.5	1315	4	0	0	0	0	multi-exon	FALSE	canonical	3	849	junction_1	97.6740611535234	4480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTAGAATATGCTTT	69211887	True	NA	10	True	AATAAA	-20	NA	69217759	69230158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69217872_69226337_69226402_69228199_69228388_69229207
transcript_113012.known	chr5	+	1455	11	FSM	ENSG00000134058.12	ENST00000502604.5	1455	11	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_3	37.1375820429925	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGAAAAGTTCAATACTC	69233000	False	NA	52	True	AATAAA	-36	NA	69235116	69277338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_113013.known	chr5	+	1426	12	FSM	ENSG00000134058.12	ENST00000256443.8	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_4	36.3774973582514	2674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATATAGTATCACAAATC	69232769	True	NA	17	True	AATAAA	-30	NA	69234885	69277430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_113014.known	chr5	+	1164	11	FSM	ENSG00000134058.12	ENST00000514676.5	1164	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	203.822496304996	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTGGTTTTTCTGA	69232795	True	NA	19	True	AATAAA	-3	NA	69234911	69277305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254670_69255459_69255529_69259817_69259937_69262204_69262305_69269206_69269294_69272891_69273042_69276542_69276691_69277106
transcript_113015.known	chr5	+	809	9	FSM	ENSG00000134058.12	ENST00000515391.5	809	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	221.528214907266	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCCTTTATGCATTTTC	69232762	True	NA	NA	False	NA	NA	NA	69234878	69269293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69235042_69235393_69235454_69252417_69252452_69254601_69254668_69255459_69255529_69258042_69258154_69259817_69259937_69262204_69262305_69269206
transcript_113018.known	chr5	+	3054	19	FSM	ENSG00000152942.19	ENST00000354868.10	3054	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.1306411387144	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368044	True	NA	24	True	ATTAAA	-14	NA	69369817	69414801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69369934_69371034_69371172_69371453_69371558_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_113021.known	chr5	+	2943	18	FSM	ENSG00000152942.19	ENST00000354312.7	2943	18	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	28.2243851475106	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTCTCCTGTCTTTT	69368051	True	NA	24	True	ATTAAA	-14	NA	69369824	69414801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69369934_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_113023.known	chr5	+	3057	18	FSM	ENSG00000152942.19	ENST00000616683.4	3057	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	50.5581990174618	934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTTCTCCTGTCTT	69368286	False	NA	22	True	ATTAAA	-12	NA	69370059	69414799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69370285_69371034_69371172_69372033_69372218_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_113030.known	chr5	+	2323	17	FSM	ENSG00000152942.19	ENST00000521422.5	2323	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	55.8099453502689	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTAATATGCTTTTCTGA	69368046	True	NA	NA	False	NA	NA	NA	69369819	69414360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69369934_69371034_69371172_69373829_69374088_69374627_69374712_69381900_69382058_69384796_69384934_69386042_69386096_69386179_69386306_69386395_69386466_69389033_69389146_69391830_69392014_69393154_69393241_69393353_69393501_69396396_69396547_69400048_69400170_69410492_69410551_69414030
transcript_113060.known	chr5	-	1183	5	FSM	ENSG00000085231.14	ENST00000380818.7	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	340.898078610015	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTATTCCTTTTTTCTT	-69369955	True	NA	-7	True	AATAAA	-17	NA	69370013	69351725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369656
transcript_113070.known	chr5	-	587	4	FSM	ENSG00000085231.14	ENST00000512561.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	382.708766557548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTTTCTTTTTCTC	-69353052	True	NA	NA	False	ATTAAA	-42	NA	69369520	69351929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69369462
transcript_11308.known	chr1	+	938	8	FSM	ENSG00000160752.15	ENST00000468479.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	553.19376979389	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAAGGCAGGAGGCAGT	155308744	False	NA	NA	False	NA	NA	NA	155308754	155319688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610
transcript_113093.known	chr5	-	1057	3	FSM	ENSG00000273841.6	ENST00000508954.4	1705	3	0	648	0	-489	multi-exon	FALSE	canonical	3	24	junction_2	758.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGCCATTGATCAAGCC	-69352997	True	NA	NA	False	AAGAAA	-8	NA	69369465	69365431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69368824
transcript_113097.known	chr5	-	761	3	FSM	ENSG00000273841.6	ENST00000509462.6	1057	3	0	296	0	-296	multi-exon	FALSE	canonical	3	23	junction_2	759	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGACCATGTCTGTTTCA	-69369258	False	NA	NA	False	NA	NA	NA	69369316	69365238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369164
transcript_113098.known	chr5	-	1461	3	FSM	ENSG00000273841.6	ENST00000328663.8	1461	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	740.5	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTGGTGCTTTGGCAGT	-69369955	True	NA	-7	True	AATAAA	-16	NA	69370013	69364743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369656
transcript_113099.known	chr5	-	1626	5	FSM	ENSG00000085231.14	ENST00000380822.9	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_1	467.216759117222	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTTTTGTGTCCAGT	-69353052	True	NA	0	True	TATAAA	-16	NA	69369520	69350983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69352254_69355648_69355795_69355894_69355954_69366502_69366596_69369462
transcript_113100.known	chr5	-	1163	3	FSM	ENSG00000273841.6	ENST00000217893.10	1163	3	0	0	0	0	multi-exon	FALSE	canonical	3	1541	junction_1	187.5	8314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGGTGCTTTGGCAGTT	-69353052	True	NA	-6	True	AATAAA	-17	NA	69369520	69364742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_69365755_69366502_69366596_69369462
transcript_113101.known	chr5	+	4423	7	FSM	ENSG00000152939.17	ENST00000325631.10	4423	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	35.5340212566305	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACGATGCTCAGGTGAC	69414119	True	NA	12	True	AATAAA	-25	NA	69415115	69444330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69415171_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449_69440501_69441531
transcript_113105.known	chr5	+	1908	6	FSM	ENSG00000152939.17	ENST00000512803.5	1908	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	15.6665248220529	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAGTAAAACAGTTT	69414385	False	NA	NA	False	AAGAAA	-6	NA	69415381	69440496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69415725_69419370_69420532_69424600_69424637_69432526_69432676_69432921_69433094_69440449
transcript_113108.known	chr5	+	6438	9	FSM	ENSG00000197822.12	ENST00000355237.6	6438	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	101.600935035067	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	NA	False	NA	9	True	NA	NA	NA	69492291	69558104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492660_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_113110.known	chr5	+	6181	9	FSM	ENSG00000197822.12	ENST00000396442.7	6181	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	31.0674669067177	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCAGTCTCCTCTCTTCGC	69489438	True	NA	9	True	NA	NA	NA	69492789	69558104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_113112.known	chr5	+	3309	9	FSM	ENSG00000197822.12	ENST00000681041.1	3309	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	107.602204322216	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGAGATGGAGTTTTGC	69489421	True	NA	NA	False	NA	NA	NA	69492772	69555275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492841_69504176_69504295_69509140_69509820_69513947_69514110_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_113114.known	chr5	+	3168	8	FSM	ENSG00000197822.12	ENST00000680784.1	3168	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	111.381491885743	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTATTTTTTTTTTTT	69489438	True	NA	NA	False	NA	NA	NA	69492789	69555253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69492901_69504176_69504295_69509140_69509820_69534693_69534840_69544903_69545120_69547929_69548102_69551543_69551586_69553569
transcript_113119.known	chr5	+	4555	17	FSM	ENSG00000183474.16	ENST00000380729.8	4555	17	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	171.875852270614	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTGATATATTTTATTAT	69556796	True	NA	NA	False	AATAAA	-24	NA	69560190	69595221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560404_69562672_69562771_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_113134.known	chr5	+	2952	16	FSM	ENSG00000183474.16	ENST00000510979.5	2952	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	136.807504667446	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTACTAAACATACAAAAAAT	69556847	True	NA	NA	False	NA	NA	NA	69560241	69593767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_113141.known	chr5	+	1956	15	FSM	ENSG00000183474.16	ENST00000446221.6	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	158.633723285011	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCCACTGCACTCCACC	69556899	False	NA	NA	False	NA	NA	NA	69560293	69592860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560404_69565099_69565189_69566130_69566209_69566966_69567054_69567726_69567778_69568152_69568208_69572444_69572551_69578711_69578803_69579020_69579109_69579756_69579865_69582365_69582430_69585593_69585698_69586253_69586357_69590327_69590368_69592078
transcript_113156.known	chr5	+	832	8	FSM	ENSG00000183474.16	ENST00000512736.5	832	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	191.328011967054	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAATTGTAAGTTGGTT	69556813	True	NA	NA	False	ATTAAA	-18	NA	69560207	69572844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_69560243_69565099_69565189_69566130_69566209_69566588_69566626_69566966_69567054_69567726_69567778_69568152_69568208_69572444
transcript_113163.known	chr5	+	1666	4	FSM	ENSG00000205572.10	ENST00000506542.1	1666	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	941.566189329719	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGGCACTGTCTTGTC	NA	False	NA	NA	False	NA	NA	NA	70025372	70043103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025459_70026406_70026516_70041523_70041632_70041740
transcript_113172.known	chr5	+	569	3	FSM	ENSG00000205572.10	ENST00000503931.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1008.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGTGACCCTGCAA	NA	False	NA	NA	False	AGTAAA	-13	NA	70025355	70030122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025459_70026406_70026516_70029765
transcript_113173.known	chr5	+	703	3	FSM	ENSG00000205572.10	ENST00000380751.9	703	3	0	0	0	0	multi-exon	FALSE	canonical	3	2021	junction_1	96	10228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70025246	70032696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025459_70026406_70026516_70032314
transcript_113180.known	chr5	+	433	3	FSM	ENSG00000205572.10	ENST00000514285.1	433	3	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_1	987	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTAAAAACTATTTTAA	NA	False	NA	NA	False	NA	NA	NA	70025586	70032493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025732_70026406_70026516_70032314
transcript_113192.known	chr5	+	1907	3	FSM	ENSG00000205572.10	ENST00000380750.8	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	987.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTGTCAGTCATTTCT	NA	False	NA	NA	False	NA	NA	NA	70025250	70043113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70025459_70026406_70026516_70041523
transcript_113204.known	chr5	-	1597	1	FSM	ENSG00000285151.1	ENST00000643472.1	1597	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAACAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	70057416	70055819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_70055800_70057400
transcript_113205.known	chr5	+	1440	8	FSM	ENSG00000205571.14	ENST00000626847.2	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	534.89911312741	8388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049653	70077592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70077018
transcript_113206.known	chr5	+	1482	9	FSM	ENSG00000205571.14	ENST00000380743.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_7	617.461625831922	8191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70049668	70077595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70076520_70076575_70077018
transcript_113207.known	chr5	+	1388	8	FSM	ENSG00000205571.14	ENST00000380742.8	1388	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	852.118656104672	7043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTATCTGTGATTGT	NA	False	NA	NA	False	AATAAA	-22	NA	70049663	70077592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70070640_70070752_70076520_70076575_70077018
transcript_113208.known	chr5	+	1550	9	FSM	ENSG00000205571.14	ENST00000506734.5	1550	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	878.118585385824	6969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTATCTGTGATTGTATTT	NA	False	NA	NA	False	AATAAA	-26	NA	70049656	70077596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70049767_70063414_70063487_70065964_70066085_70066933_70067135_70067293_70067447_70069234_70069331_70070640_70070752_70071281_70071391_70077018
transcript_113221.nnic	chr5	-	1606	6	NNC	ENSG00000253816.3	novel	497	4	NA	NA	-31368	745	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_3	22.3928560036454	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAATTAAGTTCTTTAG	NA	False	NA	NA	False	AAAAAG	-5	NA	70290298	70219172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_70220093_70221930_70222016_70225607_70225796_70258881_70259038_70260503_70260538_70290075
transcript_113235.nic	chr5	+	1392	16	NIC	ENSG00000226259.10	novel	1432	16	NA	NA	-40	-78	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	162.586455633781	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	70415311	70447448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_70415390_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_113237.nic	chr5	+	1624	16	NIC	ENSG00000226259.10	novel	1432	16	NA	NA	-40	154	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	162.586455633781	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	70415311	70447680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_70415390_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_113238.nic	chr5	+	2012	16	NIC	ENSG00000226259.10	novel	1432	16	NA	NA	-40	53	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	162.586455633781	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGAAATTAATACATAT	NA	False	NA	NA	False	NA	NA	NA	70415311	70448068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_70415390_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_113240.nic	chr5	+	1507	16	NIC	ENSG00000226259.10	novel	1954	15	NA	NA	6	-78	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	159.608214770488	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAATCTGACTTAAGAAA	NA	False	NA	NA	False	AATAAA	-39	NA	70415357	70447448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_70415551_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_113242.nic	chr5	+	1739	16	NIC	ENSG00000226259.10	novel	1954	15	NA	NA	6	154	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	159.608214770488	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTATGTTAATTCATTA	NA	False	NA	NA	False	ATTAAA	-14	NA	70415357	70447680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_70415551_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_113247.known	chr5	+	1055	9	FSM	ENSG00000226259.10	ENST00000507549.7	1055	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.706253767549	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTAAGTTGGTTGTACCTT	NA	False	NA	NA	False	ATTAAA	-25	NA	70415395	70427991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70415551_70417821_70417920_70420248_70420338_70421279_70421358_70421736_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584
transcript_113258.known	chr5	+	1432	16	FSM	ENSG00000226259.10	ENST00000508065.7	1432	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	162.586455633781	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGAAATTCAGTAGTAC	NA	False	NA	NA	False	ATTAAA	-26	NA	70415351	70447526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70415390_70420248_70420338_70421279_70421358_70421734_70421772_70422112_70422200_70422872_70422924_70423298_70423354_70427584_70427691_70433869_70433961_70434178_70434267_70434914_70435023_70437530_70437595_70440755_70440860_70441415_70441519_70445482_70445523_70447233
transcript_113261.nnic	chr5	-	1542	7	NNC	ENSG00000196302.5	novel	418	4	NA	NA	-30583	35521	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	10.3869576339219	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTATCTCAAGAAACAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	70585849	70480865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_70481539_70516307_70516483_70518320_70518406_70522000_70522189_70555217_70555374_70556839_70556874_70585618
transcript_113295.known	chr5	+	569	3	FSM	ENSG00000172058.16	ENST00000504458.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1009.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATCAGTGACCCTGCAA	NA	False	NA	NA	False	AGTAAA	-13	NA	70900773	70905541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70900877_70901824_70901934_70905184
transcript_113296.known	chr5	+	699	3	FSM	ENSG00000172058.16	ENST00000317633.14	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	2023	junction_1	95.5	11527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900668	70908115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70900877_70901824_70901934_70907733
transcript_1133.known	chr1	-	727	4	FSM	ENSG00000162585.17	ENST00000378546.9	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_3	132.290085292386	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181869	True	NA	-5	True	ATTAAA	-40	NA	2194772	2189547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2189782_2193638_2193911_2193997_2194134_2194687
transcript_113301.known	chr5	+	663	3	FSM	ENSG00000172058.16	ENST00000507348.5	663	3	0	0	0	0	multi-exon	TRUE	canonical	3	253	junction_1	980.5	2456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTTAACATAGTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	70900977	70908115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70901150_70901824_70901934_70907733
transcript_113323.known	chr5	+	1445	8	FSM	ENSG00000172062.17	ENST00000506163.5	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	544	junction_7	544.190542860472	6927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATATTATTTTGCCCT	NA	False	NA	NA	False	TTTAAA	-29	NA	70925094	70953040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70952438
transcript_113324.known	chr5	+	1482	9	FSM	ENSG00000172062.17	ENST00000380707.9	1482	9	0	0	0	0	multi-exon	FALSE	canonical	3	1147	junction_7	403.48727907457	9567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATCTGTGATTGTATT	NA	False	NA	NA	False	AATAAA	-25	NA	70925086	70953015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_70925185_70938838_70938911_70941388_70941509_70942357_70942559_70942717_70942871_70944657_70944754_70946065_70946177_70951940_70951995_70952438
transcript_113326.known	chr5	-	2077	17	FSM	ENSG00000145736.14	ENST00000330280.11	2077	17	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	202.49934413474	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGGCTGAGGCAGGAGA	NA	False	NA	NA	False	NA	NA	NA	71067650	71035075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71035797_71037506_71037547_71041521_71041625_71042180_71042285_71045443_71045508_71048005_71048114_71048761_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067493
transcript_113346.nnic	chr5	-	1060	9	NIC	ENSG00000145736.14	novel	860	8	NA	NA	-102	0	combination_of_known_splicesites	FALSE	canonical	3	49	junction_8	229.577737378867	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067791	71055029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71065124_71065223_71067654
transcript_113359.known	chr5	-	860	8	FSM	ENSG00000145736.14	ENST00000523003.5	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_7	176.981378012675	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAACATTTATTAATTTAT	NA	False	NA	15	True	AATATA	-31	NA	71067689	71055029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707_71062797_71067654
transcript_113360.known	chr5	-	1991	9	FSM	ENSG00000145736.14	ENST00000521942.5	1991	9	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	131.234522896988	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTATATTAAAAATTTT	NA	False	NA	NA	False	AAAAAG	-15	NA	71062799	71047455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_71048850_71049067_71049159_71055351_71055458_71059689_71059745_71060119_71060171_71060843_71060931_71061271_71061309_71061687_71061766_71062707
transcript_113364.nic	chr5	+	1647	10	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-65	55897	-30	-21770	5prime_fragment	FALSE	canonical	3	22	junction_5	4.56503079648314	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAGGAAGAAGCAAGAT	NA	False	NA	37	True	AAGAAA	-2	NA	71455620	71489580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483_71486628_71489403
transcript_113366.nic	chr5	+	1469	9	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-65	58851	-30	-24724	5prime_fragment	FALSE	canonical	3	22	junction_5	4.84122918275927	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTGATTTTAAAAGGAA	NA	False	NA	NA	False	AAGAAA	-28	NA	71455620	71486626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816_71461927_71464057_71464118_71466095_71466222_71467353_71467488_71470394_71470490_71483841_71483897_71486483
transcript_113370.nic	chr5	+	856	3	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-65	83551	-30	-49424	5prime_fragment	FALSE	canonical	3	31	junction_1	1	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAATTTATTTCTG	NA	False	NA	NA	False	NA	NA	NA	71455620	71461926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578_71458856_71461816
transcript_113371.nic	chr5	+	740	2	ISM	ENSG00000145734.20	ENST00000508917.6	7194	32	-65	86628	-30	-52501	5prime_fragment	FALSE	canonical	3	31	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGGTAAGGGAGGAGAA	NA	False	NA	28	True	NA	NA	NA	71455620	71458849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_71456090_71458578
transcript_113374.known	chr5	+	3473	17	FSM	ENSG00000131844.17	ENST00000682045.1	3473	17	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	86.4332970778623	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71586786	71658706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71586851_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_113376.known	chr5	+	3624	17	FSM	ENSG00000131844.17	ENST00000340941.11	3624	17	0	0	0	0	multi-exon	FALSE	canonical	2	164	junction_12	49.0763117501713	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587339	71658706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_113378.known	chr5	+	3486	17	FSM	ENSG00000131844.17	ENST00000683429.1	3486	17	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_1	81.6855393796846	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTTCCTAATAAAGTCA	NA	False	NA	-24	True	AATAGA	-9	NA	71587333	71658674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587443_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_113381.known	chr5	+	3574	16	FSM	ENSG00000131844.17	ENST00000683789.1	3574	16	0	0	0	0	multi-exon	FALSE	canonical	2	120	junction_6	65.7590213498413	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGATATTTAGTA	NA	False	NA	8	True	AATAAA	-17	NA	71587275	71658706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002_71641076_71643818_71643896_71646210_71646278_71649096_71649254_71650068_71650184_71652668_71652755_71656742
transcript_113383.known	chr5	+	2110	11	FSM	ENSG00000131844.17	ENST00000683665.1	2110	11	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	30.3947363864206	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCACCAAATTG	NA	False	NA	NA	False	ATTAAA	-23	NA	71587279	71641967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71626639_71626754_71632120_71632186_71634942_71635043_71635150_71635247_71641002
transcript_113384.known	chr5	+	1360	10	FSM	ENSG00000131844.17	ENST00000629193.3	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	63.5256339821926	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTAGTTCTTTTTGTTTT	NA	False	NA	19	True	AGTAAA	-15	NA	71587316	71641368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_71587555_71592925_71592993_71596279_71596365_71599658_71599761_71602505_71602634_71604355_71604469_71632120_71632186_71634942_71635043_71635150_71635247_71641002
transcript_113385.nic	chr5	+	2283	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-276	14260	-35	-9	5prime_fragment	FALSE	canonical	3	89	junction_4	18.1848150939183	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAGAAAGAAAAGCCAAA	72107187	False	NA	-44	True	AAAAAG	-31	NA	72107198	72195305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_113386.nic	chr5	+	2400	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-276	14143	-35	0	5prime_fragment	FALSE	canonical	3	89	junction_4	18.1848150939183	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGAAGAGAAAAAAGAACC	72107187	False	NA	-39	True	AAAAAG	-37	NA	72107198	72195422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_113387.nic	chr5	+	2527	5	ISM	ENSG00000131711.15	ENST00000296755.12	11790	7	-276	14016	-35	109	5prime_fragment	FALSE	canonical	3	89	junction_4	18.1848150939183	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAAGCTCCCTAAAGAC	72107187	False	NA	-75	True	AAAAAG	-26	NA	72107198	72195549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865
transcript_113388.known	chr5	+	572	2	FSM	ENSG00000131711.15	ENST00000504183.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATGTGTATATATATACA	72096261	True	NA	NA	False	NA	NA	NA	72107476	72116030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72107716_72115697
transcript_113389.known	chr5	+	11790	7	FSM	ENSG00000131711.15	ENST00000296755.12	11790	7	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_6	31.4360020076062	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCATGTGTGTGCTGTGCT	72096259	True	NA	17	True	AATAAA	-18	NA	72107474	72209565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72107716_72115697_72115800_72183742_72183826_72186613_72186755_72193865_72200368_72203562_72203802_72205083
transcript_113390.known	chr5	-	2641	6	FSM	ENSG00000285804.2	ENST00000649991.1	2641	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.748331477354788	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTGTCGTAATTTGTTA	-72107943	False	NA	NA	False	AATAAA	-22	NA	72108000	72095854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72097971_72098278_72098438_72098757_72098915_72100922_72100999_72103577_72103635_72107924
transcript_113393.known	chr5	-	2628	11	FSM	ENSG00000113048.17	ENST00000457646.8	2628	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	226.464323901139	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGTGTACTCTTTATCT	-72308760	True	NA	-9	True	AATAAA	-14	NA	72320255	72219527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320180
transcript_113395.known	chr5	-	2770	11	FSM	ENSG00000113048.17	ENST00000261413.10	2770	11	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_5	47.3184953268804	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCCACCACTAATATT	-72308745	True	NA	NA	False	ATTAAA	-25	NA	72320240	72219402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72221149_72223682_72223851_72226056_72226200_72228265_72228369_72232442_72232559_72234118_72234198_72238013_72238129_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_113396.known	chr5	-	486	5	FSM	ENSG00000113048.17	ENST00000520285.5	486	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	338.099467612713	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATCTGTCAGAATTGTAC	-72308696	True	NA	NA	False	AATAAA	-15	NA	72320191	72294553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72294789_72295530_72295590_72297631_72297703_72314080_72314159_72320148
transcript_113398.nnic	chr5	+	2297	12	NNC	ENSG00000049883.15	novel	2195	11	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	39.7706233209745	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGCTTGGATTTCTC	72318493	True	NA	NA	False	NA	NA	NA	72320372	72360220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359420_72359528_72359603
transcript_113402.known	chr5	+	2195	11	FSM	ENSG00000049883.15	ENST00000308077.9	2195	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	30.0958468895627	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGGATTTCTCCACTT	72318493	True	NA	NA	False	NA	NA	NA	72320372	72360225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202_72358824_72359603
transcript_113407.known	chr5	+	11145	10	FSM	ENSG00000049883.15	ENST00000380639.10	11145	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	11.4514541639538	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTCTCCTTGAATT	72318493	True	NA	3	True	AATAAA	-15	NA	72320372	72368395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_113418.nnic	chr5	+	1863	9	NIC	ENSG00000049883.15	novel	11145	10	NA	NA	0	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	35.124777579367	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTTTATCTTATTTGTTAA	72318493	True	NA	8	True	AATAAA	-13	NA	72320372	72359227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72358202
transcript_113419.known	chr5	+	2029	9	FSM	ENSG00000049883.15	ENST00000543322.5	2029	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	34.4700957352892	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGTGTCTGGTCACCAGTG	72318487	True	NA	NA	False	AATATA	-17	NA	72320366	72359352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_113420.known	chr5	+	1001	9	FSM	ENSG00000049883.15	ENST00000510676.6	1001	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.141505321877	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGCACCTTCCAGCCACTCA	72318508	True	NA	NA	False	ATTAAA	-19	NA	72320387	72358384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_113421.nic	chr5	+	1852	9	NIC	ENSG00000049883.15	novel	11145	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	30.9636884107821	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTATTTGTTAATGATTT	72318494	True	NA	14	True	AATAAA	-19	NA	72320373	72359233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_72320510_72322171_72322265_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_113425.known	chr5	+	881	8	FSM	ENSG00000049883.15	ENST00000515198.5	881	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	36.4288515395393	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGCAAGTGCTGCAGAA	72318488	True	NA	NA	False	NA	NA	NA	72320367	72352757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72331257_72331376_72335793_72335886_72338621_72338736_72342961_72343037_72352640
transcript_113426.known	chr5	+	1440	8	FSM	ENSG00000049883.15	ENST00000503315.5	1440	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.4216583117027	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCATCTGCAAAACAAT	72318518	True	NA	NA	False	NA	NA	NA	72320397	72358912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72320510_72322171_72322265_72326611_72326742_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_113430.known	chr5	+	2648	10	FSM	ENSG00000049883.15	ENST00000486995.5	2648	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.2157184269328	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATCTTATTTGTTAAT	72318493	True	NA	9	True	AATAAA	-14	NA	72320372	72359228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72321180_72322171_72322265_72326611_72326742_72331257_72331376_72335017_72335097_72335793_72335886_72338621_72338736_72342961_72343037_72352640_72352755_72358202
transcript_113431.known	chr5	+	8489	25	FSM	ENSG00000083312.19	ENST00000337273.10	8489	25	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	41.2697553704082	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTTGCACTCTGATTTTT	72813801	True	NA	10	True	AATAAA	-15	NA	72816660	72914388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_113432.known	chr5	+	3028	25	FSM	ENSG00000083312.19	ENST00000506351.6	3028	25	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	22.2573333732702	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCTATTCAGTCT	72836821	True	NA	25	True	NA	NA	NA	72848183	72908951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72905302_72905446_72908708
transcript_113438.known	chr5	+	11040	24	FSM	ENSG00000083312.19	ENST00000680533.1	11040	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	59.3212713325851	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAAATGTTTGCAAACA	NA	False	NA	15	True	AATAAA	-20	NA	72816311	72916733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72816753_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595_72865730_72872638_72872721_72875614_72875738_72877227_72877347_72882466_72882528_72883063_72883233_72887069_72887223_72888077_72888304_72889785_72889958_72891809_72891897_72893138_72893247_72893376_72893536_72893615_72893704_72896457_72896557_72897055_72897152_72900005_72900082_72900973_72901074_72903708_72903784_72908708
transcript_113441.nic	chr5	+	1855	6	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	-87	42103	-24	1117	5prime_fragment	FALSE	canonical	3	179	junction_1	19.6834956245074	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTTGTAGATGGTCAT	72836734	True	NA	NA	False	AATAAA	-16	NA	72848096	72866848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773_72855924_72861807_72861915_72865595
transcript_113443.nic	chr5	+	488	4	ISM	ENSG00000083312.19	ENST00000506351.6	3028	25	-87	53035	-24	0	5prime_fragment	FALSE	canonical	3	179	junction_1	23.4141457717813	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTTGGTAAGTTATATTA	72836734	True	NA	NA	False	TTTAAA	-35	NA	72848096	72855916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_72848252_72848384_72848499_72851243_72851320_72855773
transcript_113444.known	chr5	-	494	1	FSM	ENSG00000272081.1	ENST00000606587.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAGGTCTCAAGTTCAC	-72955673	False	NA	NA	False	NA	NA	NA	72955699	72955205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_72955200_72955700
transcript_113447.known	chr5	+	4921	26	FSM	ENSG00000157107.14	ENST00000430046.7	4921	26	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_6	11.8655130525401	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATTGGTTTATGTGTCTT	72954111	True	NA	7	True	AATAAA	-19	NA	72956040	73090522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_72956130_72968497_72968590_72989426_72989502_72990477_72990620_72990711_72990865_73006444_73006550_73015625_73015725_73017211_73017309_73034656_73034702_73037142_73037216_73041290_73041316_73051348_73051407_73052331_73052508_73054159_73054172_73054524_73054550_73056064_73056108_73058432_73058525_73063840_73063945_73068649_73068780_73074741_73074854_73077337_73077494_73078179_73078313_73081782_73081983_73082760_73082826_73087588_73087754_73088067
transcript_113448.known	chr5	+	1244	4	FSM	ENSG00000157111.13	ENST00000454765.7	1244	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	5.43650214343336	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTATATTCTGACTTTC	73120450	True	NA	4	True	AATAAA	-14	NA	73120574	73131809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73120697_73123305_73124014_73128389_73128532_73131537
transcript_113449.known	chr5	-	744	1	FSM	ENSG00000272525.1	ENST00000607001.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGTCTTAACCATGAA	-73498147	True	NA	-2	True	AATAAA	-21	NA	73498293	73497549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73497500_73498300
transcript_11345.known	chr1	+	1700	8	FSM	ENSG00000160753.16	ENST00000490373.5	1700	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	81.7447495661504	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCCACCTGTAAGGTGAAA	155322366	True	NA	20	True	AATAAA	-20	NA	155324521	155330730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326579_155327133_155328149_155328276_155330402
transcript_113454.known	chr5	+	897	6	FSM	ENSG00000145741.17	ENST00000335895.12	897	6	0	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	269.894053287582	97147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	73423263	True	NA	31	True	AATAAA	-16	NA	73498407	73505495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_113457.known	chr5	+	1237	6	FSM	ENSG00000145741.17	ENST00000380591.8	1276	6	7	32	7	-32	multi-exon	FALSE	canonical	3	613	junction_1	2159.07133740412	7177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGGTGGTATAAAGTTCT	73423304	True	NA	-26	True	ATTAAA	-26	NA	73498448	73505635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_113471.known	chr5	+	740	5	FSM	ENSG00000145741.17	ENST00000678135.1	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2635.04339385521	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCGAAGAAGCCTGGGAAT	73423291	True	NA	-29	True	NA	NA	NA	73498435	73505435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73502487_73502602_73502915_73503118_73504346_73504404_73505191
transcript_113474.known	chr5	+	2165	4	FSM	ENSG00000145741.17	ENST00000679077.1	2165	4	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_1	2481.67582268291	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAATAAAGTTCTTTGC	73423312	True	NA	5	True	NA	NA	NA	73498456	73505469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498800_73499133_73499203_73502487_73503118_73504346
transcript_113477.known	chr5	+	1177	5	FSM	ENSG00000145741.17	ENST00000514360.5	1177	5	0	0	0	0	multi-exon	FALSE	canonical	3	5451	junction_1	295.649285471824	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTATTTTTTTATT	73423297	True	NA	31	True	AATAAA	-16	NA	73498441	73505495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73498559_73499133_73499203_73502487_73503118_73504346_73504404_73505191
transcript_113478.known	chr5	+	515	3	FSM	ENSG00000145741.17	ENST00000509708.2	515	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2996.5	831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTTTTATTTTTTTA	73502368	True	NA	29	True	AATAAA	-14	NA	73502590	73505493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73502602_73502915_73503118_73505191
transcript_11348.known	chr1	+	1749	8	FSM	ENSG00000160753.16	ENST00000471876.5	1749	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	106.406805060886	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTCTTTCACTGTGGG	155322383	True	NA	29	True	AATAAA	-15	NA	155324538	155331114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155324810_155325101_155325179_155325315_155325491_155325566_155325673_155325863_155325911_155326897_155327133_155328149_155328276_155330402
transcript_113480.known	chr5	+	5096	13	FSM	ENSG00000164338.10	ENST00000296792.9	5096	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	11.1314743957044	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGAGAGAAACCATCTT	73562089	True	NA	15	True	AATAAA	-29	NA	73565742	73583380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73565913_73567261_73567435_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_113488.known	chr5	+	2057	12	FSM	ENSG00000164338.10	ENST00000509005.5	2057	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.7643729106999	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAAAAGCCTCTTTCTTG	73562089	True	NA	-2	True	AAAACA	-10	NA	73565742	73580514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_73565913_73568234_73568328_73568419_73568605_73569496_73569676_73570585_73570712_73572488_73572625_73576951_73577037_73577855_73578006_73578750_73578853_73579016_73579151_73579316_73579376_73579876
transcript_113492.known	chr5	-	2161	9	FSM	ENSG00000164331.10	ENST00000296785.8	2161	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	9.25253343684853	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTGTCATTTCTAGAAG	-73564585	True	NA	NA	False	AATAAA	-24	NA	73565639	73552189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73552853_73553405_73553487_73554321_73554389_73554860_73554987_73555487_73555586_73557574_73557641_73561129_73561289_73562592_73562986_73565131
transcript_113501.known	chr5	-	1298	4	FSM	ENSG00000164331.10	ENST00000515804.1	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	8.60232526704263	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-73564613	True	NA	NA	False	AGTAAA	-1	NA	73565667	73557430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73557641_73561129_73561289_73562592_73562986_73565131
transcript_113506.known	chr5	-	573	2	FSM	ENSG00000164331.10	ENST00000509433.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATATGATTTTCTGGA	-73565194	False	NA	-69	True	NA	NA	NA	73565204	73562485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_73562986_73565131
transcript_113508.known	chr5	-	2993	21	FSM	ENSG00000164347.18	ENST00000296805.8	2993	21	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_11	21.7146839719117	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGCTGTGGCCTTTTTCC	-74761993	True	NA	-3	True	AATAAA	-16	NA	74767117	74721205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_113513.known	chr5	-	1870	15	FSM	ENSG00000164347.18	ENST00000427854.6	1870	15	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	21.4024841205551	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGGTTGGTCTTGTTT	-74762022	True	NA	NA	False	AATATA	-13	NA	74767146	74736668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74766937
transcript_113514.known	chr5	+	2021	14	FSM	ENSG00000049860.14	ENST00000511181.5	2021	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	124.482597818986	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	NA	False	NA	30	True	AATAAA	-19	NA	74640022	74721288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74640559_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_113515.known	chr5	+	1812	14	FSM	ENSG00000049860.14	ENST00000261416.12	1812	14	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	40.6172785106224	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	74680655	True	NA	30	True	AATAAA	-19	NA	74685232	74721288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74685560_74689327_74689474_74693638_74693705_74696692_74696740_74696995_74697107_74705218_74705321_74713505_74713636_74715509_74715691_74716586_74716674_74718290_74718364_74718796_74718972_74720427_74720519_74720642_74720748_74721117
transcript_113517.known	chr5	-	6118	13	FSM	ENSG00000198780.13	ENST00000389156.9	6118	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	54.583969461942	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-74865690	True	NA	-1	True	AATAAA	-14	NA	74866966	74777573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74813839_74814020_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_113519.known	chr5	-	5810	12	FSM	ENSG00000198780.13	ENST00000510496.5	5810	12	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_7	80.0827051829637	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTGATTATAGATTAAT	-74866815	False	NA	-1	True	AATAAA	-14	NA	74866838	74777573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74782009_74782930_74783135_74796029_74796187_74800879_74801031_74801589_74801630_74804492_74804606_74805155_74805285_74834425_74834598_74838964_74839051_74840073_74840174_74841544_74841680_74866750
transcript_113530.known	chr5	+	4337	6	FSM	ENSG00000164346.10	ENST00000610426.5	4337	6	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	24.071559982685	3602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGTGTTTTTTTTCTTC	74761718	True	NA	NA	False	AATAAA	-16	NA	74767248	74780113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74773867_74774061_74776603
transcript_113536.known	chr5	+	1199	5	FSM	ENSG00000164346.10	ENST00000296802.9	1199	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	204.822484117345	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATCTGCATTTGTGAGTG	NA	False	NA	20	True	AATATA	-19	NA	74766990	74776910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74767364_74768930_74769119_74769213_74769365_74770630_74770811_74776603
transcript_113541.known	chr5	+	645	3	FSM	ENSG00000164346.10	ENST00000514918.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	17.5	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAATTTATTAGAATG	74761717	True	NA	NA	False	AATAAA	-42	NA	74767247	74769554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74767364_74768930_74769119_74769213
transcript_113542.known	chr5	-	4821	3	FSM	ENSG00000171617.15	ENST00000302351.9	4821	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTGTGTGGGTCTTCAT	-74639794	True	NA	0	True	AATAAA	-22	NA	74640728	74627408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74629993_74634683_74636499_74640306
transcript_113546.known	chr5	-	3047	22	FSM	ENSG00000164347.18	ENST00000509430.5	3047	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	80.9871073975719	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCTAATATCTTATTTTA	-74761981	True	NA	-5	True	AATAAA	-19	NA	74767105	74721257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74721784_74722378_74722562_74725639_74725756_74725940_74726127_74730259_74730399_74733021_74733099_74736795_74736986_74738317_74738418_74738501_74738643_74739988_74740138_74741528_74741610_74745677_74745858_74746104_74746166_74747691_74747781_74750578_74750668_74751367_74751494_74758848_74758947_74759368_74759427_74760901_74760987_74763679_74763767_74765034_74765153_74766937
transcript_113547.known	chr5	+	448	3	FSM	ENSG00000164346.10	ENST00000515524.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	245.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTCCAGTTTTATAAATG	74769213	False	NA	-9	True	ATTAAA	-15	NA	74769297	74776804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74769365_74770630_74770811_74776603
transcript_113548.known	chr5	+	806	3	FSM	ENSG00000049860.14	ENST00000509579.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	10	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGACCCTCTATCTTAT	74719973	False	NA	30	True	AATAAA	-19	NA	74719988	74721288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_74720519_74720642_74720748_74721117
transcript_113550.known	chr5	-	449	1	FSM	ENSG00000182383.8	ENST00000469428.1	449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCACATGGAGGGAGGTTC	NA	False	NA	-42	True	NA	NA	NA	74990637	74990188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_74990200_74990600
transcript_113552.known	chr5	-	2465	18	FSM	ENSG00000113163.19	ENST00000261415.12	2465	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	40.3743726316326	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTGGTTTACTGTGGTT	-75506882	True	NA	-3	True	AATAAA	-20	NA	75511617	75368487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75368659_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_113553.known	chr5	-	2036	17	FSM	ENSG00000113163.19	ENST00000642809.1	2036	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	37.5541276027017	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAATAAAGCGAGCTTT	-75511281	False	NA	-33	True	AATATA	-43	NA	75511302	75368517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75368659_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400292_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_113554.known	chr5	-	3154	17	FSM	ENSG00000113163.19	ENST00000645483.1	3154	17	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	13.5945761243225	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTGAGTTTGACATTT	-75506898	True	NA	NA	False	TTTAAA	-6	NA	75511633	75373269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_113558.known	chr5	-	1413	2	FSM	ENSG00000113163.19	ENST00000647127.2	1413	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAACCTCGACCTCCCAG	-75506902	True	NA	NA	False	NA	NA	NA	75511637	75505229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75506117_75511111
transcript_113559.known	chr5	-	8012	18	FSM	ENSG00000113163.19	ENST00000644072.2	8012	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	35.4502429213594	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTACTGTGGTTCT	-75506894	True	NA	-1	True	AATAAA	-22	NA	75511629	75368485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75374192_75379336_75379474_75381071_75381202_75381948_75382078_75384641_75384713_75385901_75386035_75389591_75389688_75399309_75399388_75400204_75400298_75402971_75403059_75411010_75411104_75416875_75417034_75419340_75419425_75425360_75425500_75426370_75426479_75459064_75459182_75505981_75506117_75511111
transcript_113560.known	chr5	+	4530	20	FSM	ENSG00000113161.17	ENST00000287936.9	4530	20	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_7	67.6738143771619	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTAAGCAGTAACCTT	75325515	True	NA	76	True	AGTAAA	-25	NA	75337219	75362101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_113569.known	chr5	+	3681	19	FSM	ENSG00000113161.17	ENST00000343975.9	3681	19	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_12	160.337491283577	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAGCCTGGGCCAGAGAA	75325527	True	NA	NA	False	AATAAA	-26	NA	75337231	75361423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359557_75359984_75360140_75360287
transcript_113579.known	chr5	+	421	3	FSM	ENSG00000113161.17	ENST00000509431.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_1	57.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTCAAATCATGTATTT	75325541	True	NA	NA	False	AATAAA	-5	NA	75337245	75344030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852
transcript_113581.known	chr5	+	4493	20	FSM	ENSG00000113161.17	ENST00000680160.1	4493	20	0	0	0	0	multi-exon	TRUE	canonical	2	27	junction_18	166.246321268111	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAATACCAATAAGTGTA	75325495	True	NA	64	True	AGTAAA	-13	NA	75337199	75362089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75337301_75342582_75342771_75343852_75343965_75344244_75344333_75345573_75345659_75347203_75347310_75350041_75350149_75350257_75350375_75350788_75350950_75351067_75351316_75351423_75351603_75354502_75354698_75355055_75355215_75355364_75355523_75356342_75356449_75358656_75358828_75359169_75359311_75359397_75359512_75359984_75360140_75360287
transcript_113582.known	chr5	+	5911	15	FSM	ENSG00000122008.15	ENST00000241436.8	5911	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	4.29047354790892	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTCGTTAACAAGATG	75511727	False	NA	6	True	AATAAA	-20	NA	75511755	75601144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_75511915_75547009_75547158_75552471_75552592_75569339_75569493_75573737_75573870_75576779_75576934_75581208_75581449_75583292_75583418_75584759_75584927_75587025_75587059_75590343_75590441_75593877_75594050_75596221_75597179_75597746_75597790_75597933
transcript_113590.known	chr5	-	2185	12	FSM	ENSG00000152359.15	ENST00000428202.7	2185	12	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	8.49987846291331	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATAAAACACTAAATCAT	-75715858	True	NA	NA	False	TATAAA	-14	NA	75717437	75674123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_113592.nic	chr5	-	1957	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	-12	4	combination_of_known_junctions	FALSE	canonical	3	3	junction_1	24.1900806116887	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGACTTTATTTCTTTAAT	-75715881	True	NA	NA	False	ATTAAA	-8	NA	75717460	75674197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_75674579_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_113593.nic	chr5	-	2007	11	NIC	ENSG00000152359.15	novel	2185	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	25.5939445963298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	-75715856	True	NA	NA	False	ATTAAA	-4	NA	75717435	75674201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75717305
transcript_113599.nnic	chr5	-	1679	10	NNC	ENSG00000152359.15	novel	896	7	NA	NA	-12	3573	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	22.7107414625278	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGATTCTTTGCTGTCTGTA	-75715881	True	NA	NA	False	AATAAA	-21	NA	75717460	75686947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_75687329_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_1136.nnic	chr1	-	660	4	NNC	ENSG00000162585.17	novel	727	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_2	540.304235284776	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181832	True	NA	-5	True	ATTAAA	-40	NA	2194735	2189547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_2189782_2193638_2193911_2194027_2194134_2194687
transcript_113600.nic	chr5	-	1617	8	NIC	ENSG00000152359.15	novel	1984	11	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	29.5917804362589	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTGGACTTTATTTCTT	NA	False	NA	NA	False	ATTAAA	-4	NA	75696213	75674201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_75674579_75677773_75677951_75685206_75685485_75689011_75689166_75690382_75690563_75692395_75692501_75694654_75694832_75696044
transcript_113604.nic	chr5	-	762	6	ISM	ENSG00000152359.15	ENST00000428202.7	2185	12	-23	20628	-12	0	5prime_fragment	FALSE	canonical	3	67	junction_1	9.13454979733539	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGCAGCACATTTAA	-75715881	True	NA	15	True	NA	NA	NA	75717460	75694751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_75694832_75702604_75702811_75705703_75705788_75707736_75707876_75712853_75712952_75717305
transcript_113605.known	chr5	-	588	4	FSM	ENSG00000152359.15	ENST00000507421.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.0203201677738	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTGCATGGCTTTTTGGT	-75715765	True	NA	NA	False	AATAAA	-19	NA	75717344	75707483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75707876_75712606_75712666_75712853_75712952_75717305
transcript_113607.nic	chr5	-	648	3	ISM	ENSG00000152359.15	ENST00000508467.5	577	4	-30	1908	-12	3	5prime_fragment	FALSE	canonical	3	75	junction_1	6.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGCTTTTTGGTATG	-75715881	True	NA	NA	False	AATAAA	-22	NA	75717460	75707480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_75707876_75712853_75712952_75717305
transcript_113608.known	chr5	-	577	4	FSM	ENSG00000152359.15	ENST00000508467.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	7.25718035235908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTAAGTGATAATATTTAA	-75715851	True	NA	NA	False	TTTAAA	-16	NA	75717430	75705572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_75705788_75707736_75707876_75712853_75712952_75717305
transcript_113611.nnic	chr5	-	727	4	Antisense	novelGene_ENSG00000122012.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTCCGTCTCACGTATTT	NA	False	NA	NA	False	ATTAAA	-18	NA	76198199	76191028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_76191156_76192427_76192538_76197541_76197600_76197767
transcript_113618.known	chr5	-	756	3	FSM	ENSG00000250348.1	ENST00000502589.1	756	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATGTTTTCTTCATTGAG	NA	False	NA	NA	False	TATAAA	-8	NA	76311462	76285541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_76285922_76286706_76286804_76311183
transcript_113619.known	chr5	+	5808	36	FSM	ENSG00000145703.17	ENST00000274364.11	5808	36	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_12	47.0240581066365	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTTAAGTTGTCTT	76396098	True	NA	25	True	AATAAA	-20	NA	76403284	76708132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_76403592_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407_76590587_76592837_76592926_76597438_76597603_76600811_76600973_76606178_76606304_76611019_76611184_76627409_76627501_76631858_76632027_76637033_76637177_76640932_76641104_76652749_76652834_76654199_76654272_76654933_76655004_76658458_76658668_76665025_76665176_76668680_76668845_76671758_76671984_76673448_76673590_76673951_76674037_76674476_76674710_76677217_76677351_76683114_76683218_76683775_76683918_76693354_76693443_76695453_76695667_76697986_76698148_76701075_76701214_76702481_76702591_76707199
transcript_113621.nnic	chr5	+	940	8	NNC	ENSG00000145703.17	novel	5808	36	NA	NA	-466	-10313	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	112.495623497639	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAATGCAAGACTGAA	76403945	False	NA	NA	False	AAAAAG	-7	NA	76403957	76590565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_76404146_76461569_76461670_76562395_76562553_76570579_76570658_76575692_76575770_76588905_76588974_76589614_76589729_76590407
transcript_113624.nnic	chr5	+	1650	3	NNC	ENSG00000164251.5	novel	2861	2	NA	NA	35	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	98.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	76815727	True	NA	10	True	TATAAA	-25	NA	76818967	76835315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_76819265_76832689_76832726_76833998
transcript_113625.known	chr5	+	2861	2	FSM	ENSG00000164251.5	ENST00000296677.5	2861	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGAGTTGTGCGTTTGT	76815789	True	NA	10	True	TATAAA	-25	NA	76819029	76835315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_76819265_76832689
transcript_113641.known	chr5	+	1373	4	FSM	ENSG00000250802.7	ENST00000503969.6	1373	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCACCAACATTTGGTAT	77086285	True	NA	NA	False	AATATA	-23	NA	77086739	77148524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77086905_77087486_77087620_77118319_77118522_77147651
transcript_113647.known	chr5	-	432	2	FSM	ENSG00000132846.6	ENST00000505685.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCATTATGTTTGGATC	-77086766	True	NA	NA	False	AATAAA	-17	NA	77087200	77079040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77079383_77087110
transcript_113649.known	chr5	+	1741	4	FSM	ENSG00000250802.7	ENST00000643848.1	1741	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.44948974278318	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACTCTGTCTCAAAAAAAA	77086260	True	NA	NA	False	NA	NA	NA	77086714	77119644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_77086905_77087486_77087620_77098654_77098748_77118319
transcript_113652.known	chr5	-	3678	13	FSM	ENSG00000164253.14	ENST00000296679.9	3678	13	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	24.0756908289023	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTCAGGCTCCAC	-77492287	False	NA	-5	True	ATTAAA	-28	NA	77492316	77430932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_113668.known	chr5	-	1507	11	FSM	ENSG00000164253.14	ENST00000515253.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	77.181668808079	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAGAAGTTTTATTAT	-77492170	False	NA	1	True	AATAGA	-22	NA	77492199	77432812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77433288_77436260_77436395_77437335_77437425_77438239_77438362_77440812_77440998_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_113678.nnic	chr5	-	1090	9	NNC	ENSG00000164253.14	novel	680	8	NA	NA	-6	-868	intron_retention	FALSE	canonical	2	7	junction_1	84.4778077367068	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAAATTTTTCCCAGCT	-77492484	False	NA	NA	False	AATAAA	-18	NA	77492513	77441798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_77441899_77449759_77449871_77451290_77451354_77453816_77453929_77459061_77459125_77463094_77463227_77464760_77464810_77489456_77489573_77492169
transcript_113696.known	chr5	-	661	4	FSM	ENSG00000171530.15	ENST00000380377.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_2	19.7989898732233	28750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAATCTGTTAGGTTCTA	-77732326	True	NA	46	True	ATTAAA	-25	NA	77776339	77691165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77693265_77693353_77708241_77708348_77776204
transcript_113697.known	chr5	-	551	5	FSM	ENSG00000171530.15	ENST00000518338.6	551	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	1216.04029538498	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAATGAGTTCATCTA	-77732248	True	NA	-55	True	NA	NA	NA	77776261	77691266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77693265_77693353_77705565_77705635_77708241_77708348_77776204
transcript_113698.known	chr5	-	446	3	FSM	ENSG00000171530.15	ENST00000520361.5	446	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1221.5	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAATTGTTTATTTTAT	-77732280	True	NA	-36	True	AATAAA	-12	NA	77776293	77691247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77708241_77708348_77776204
transcript_113699.known	chr5	-	2301	3	FSM	ENSG00000171530.15	ENST00000306388.10	2301	3	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_1	21	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	-77732274	True	NA	-29	True	AATAAA	-19	NA	77776287	77691240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77693353_77708241_77708348_77776204
transcript_113700.known	chr5	-	157	2	FSM	ENSG00000171530.15	ENST00000520039.1	157	2	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAAGACTTCTGTGT	-77732261	True	NA	-4	True	NA	NA	NA	77776274	77693265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77693353_77776204
transcript_113701.known	chr5	-	717	3	FSM	ENSG00000171530.15	ENST00000518218.5	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	2412	junction_2	21	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATTTTATACTTTAC	NA	False	NA	-29	True	AATAAA	-19	NA	77708613	77691240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77691499_77693265_77693353_77708241
transcript_113702.known	chr5	-	2392	3	FSM	ENSG00000171530.15	ENST00000651106.1	2392	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1226	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGTTCATCTAATAAAATT	-77732305	True	NA	-47	True	AATAAA	-1	NA	77776318	77691258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_77693431_77708241_77708348_77776204
transcript_113703.known	chr5	-	3980	27	FSM	ENSG00000132842.14	ENST00000255194.11	3980	27	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_16	25.1896945209578	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTGCATTTTTAAT	-78290786	True	NA	0	True	AATAAA	-18	NA	78294698	78002325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_78003056_78015409_78015549_78020691_78020790_78034360_78034446_78039042_78039275_78089392_78089500_78100952_78101026_78110206_78110355_78113751_78113924_78116125_78116235_78128029_78128161_78129120_78129308_78141142_78141320_78156257_78156368_78162818_78162952_78165609_78165673_78175625_78175698_78175783_78175839_78177338_78177437_78181506_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_113708.nic	chr5	-	1024	8	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-45	179263	-45	-59867	5prime_fragment	FALSE	canonical	3	208	junction_4	14.8653823306612	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCCGTATACTATGG	-78290831	True	NA	NA	False	NA	NA	NA	78294743	78181588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_78181663_78216054_78216238_78225541_78225609_78227371_78227533_78228143_78228240_78240861_78240937_78267519_78267596_78294451
transcript_113709.nic	chr5	-	368	2	ISM	ENSG00000132842.14	ENST00000255194.11	3980	27	-45	265194	-45	-145798	5prime_fragment	FALSE	canonical	3	241	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGGTAAAATACTCATTTA	-78290831	True	NA	NA	False	NA	NA	NA	78294743	78267519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_78267596_78294451
transcript_113710.known	chr5	-	1479	2	FSM	ENSG00000245556.4	ENST00000421004.4	1482	2	0	3	0	-3	multi-exon	FALSE	canonical	3	27	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCCTGCATGTATATTTA	-78360477	False	NA	4	True	ATTAAA	-20	NA	78360507	78358800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_78359986_78360213
transcript_113711.known	chr5	-	493	3	FSM	ENSG00000245556.4	ENST00000513755.2	541	3	21	27	21	-27	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAATAAAAGTTTTCACA	-78360129	True	NA	NA	False	NA	NA	NA	78360393	78342364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_78342601_78342868_78342946_78360213
transcript_113713.known	chr5	+	6143	9	FSM	ENSG00000085365.18	ENST00000621999.5	6143	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	37.4631068519417	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGGTACCTCTGCTAA	78356302	True	NA	11	True	AATAAA	-22	NA	78360616	78480739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_78360729_78388836_78388915_78415519_78415619_78416540_78416650_78418774_78418904_78421800_78421961_78449932_78450035_78459244_78459363_78475503
transcript_113725.known	chr5	+	1603	3	FSM	ENSG00000085365.18	ENST00000506858.2	1603	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	162.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGCAAGAAAATATAAATA	78457731	True	NA	NA	False	AATAAA	-23	NA	78457792	78476829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_78457952_78459244_78459363_78475503
transcript_113727.known	chr5	-	933	4	FSM	ENSG00000145685.14	ENST00000512759.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	6.34209919681348	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACGCCCGCTGCATCCGG	-78647356	True	NA	NA	False	GGGGCT	-31	NA	78648895	78510026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_78510399_78564812_78564872_78632263_78632369_78648498
transcript_113728.nnic	chr5	-	844	4	NNC	ENSG00000145685.14	novel	510	4	NA	NA	-48	-40510	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	90.3855937390221	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGAGGATCCTTTTTCA	-78648805	False	NA	NA	False	AATAAA	-33	NA	78648820	78550548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_78550907_78564812_78564872_78632263_78632369_78648498
transcript_113730.known	chr5	-	455	3	FSM	ENSG00000132837.15	ENST00000518707.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAGTTGTATATTTAC	-79235871	True	NA	NA	False	AATAAA	-20	NA	79235938	79120276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79120454_79121202_79121353_79235810
transcript_113731.known	chr5	+	2470	8	FSM	ENSG00000145692.15	ENST00000274353.10	2470	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.43276948084663	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTGTATTTTATTCT	79111748	True	NA	NA	False	ATTAAA	-20	NA	79111808	79132288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754_79127984_79130932
transcript_113733.nic	chr5	+	1561	7	ISM	ENSG00000145692.15	ENST00000274353.10	2470	8	-50	3908	-50	183	5prime_fragment	TRUE	canonical	2	6	junction_4	2.60874597374975	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATAGTGGTGC	79111698	True	NA	NA	False	AATACA	-14	NA	79111758	79128380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_79111919_79115766_79115900_79119258_79119378_79120349_79120542_79121217_79121366_79126045_79126229_79127754
transcript_113736.known	chr5	+	9096	11	FSM	ENSG00000152409.9	ENST00000396137.5	9096	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	5.8	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTGATTTTGTTTGTT	79235322	True	NA	8	True	AATAAA	-20	NA	79236130	79327211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79237683_79277909_79278084_79290120_79290272_79291129_79291300_79300152_79300319_79300675_79300864_79306374_79306462_79312402_79312499_79314256_79314852_79315999_79316311_79321605
transcript_113737.known	chr5	-	787	1	FSM	ENSG00000213757.3	ENST00000474167.1	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	79284918	79284131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79284100_79284900
transcript_113738.known	chr5	-	5798	9	FSM	ENSG00000152413.15	ENST00000334082.11	5798	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	21.608736659046	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGATATCAAATGATTTT	-79512658	True	NA	NA	False	NA	NA	NA	79514134	79372635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79376198_79396822_79396904_79397526_79397638_79401898_79402056_79439009_79439150_79447052_79447146_79450989_79451122_79456861_79457019_79512769
transcript_113753.known	chr5	+	3223	16	FSM	ENSG00000164329.14	ENST00000423041.6	3223	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	52.7255367181997	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	NA	False	NA	11	True	AATAAA	-21	NA	79612432	79686648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79612736_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_113756.known	chr5	+	3129	16	FSM	ENSG00000164329.14	ENST00000296783.7	3129	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	51.0169470753483	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	79609509	True	NA	11	True	AATAAA	-21	NA	79612572	79686648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79612770_79613010_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_113766.known	chr5	+	5100	15	FSM	ENSG00000164329.14	ENST00000453514.6	5100	15	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	32.0417457294036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCTCATGAAATGAATA	79609377	True	NA	20	True	AATAAA	-24	NA	79612440	79688246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_113773.nic	chr5	+	3510	15	NIC	ENSG00000164329.14	novel	3223	16	NA	NA	-12	0	intron_retention	FALSE	canonical	3	102	junction_6	32.2573358212626	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCCTTTTTTTTCTGT	NA	False	NA	11	True	AATAAA	-21	NA	79612420	79686648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642843_79642911_79645122_79645193_79648616_79648694_79649061_79649191_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_113783.known	chr5	+	2997	14	FSM	ENSG00000164329.14	ENST00000504233.5	2997	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	60.6521754806251	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATGTTTGTAAAAAAT	79609371	True	NA	NA	False	AATAAA	-17	NA	79612434	79686266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_79613076_79619611_79619786_79619993_79620084_79623251_79623490_79640850_79640966_79641104_79641197_79642831_79642911_79645122_79645193_79648616_79648694_79656957_79657002_79668891_79669029_79679578_79679671_79681981_79682062_79685198
transcript_113785.nnic	chr5	+	1529	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25664	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.8613807855649	143	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	NA	False	NA	NA	False	AATAAA	-18	NA	79784416	79800222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79784685_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_113786.nnic	chr5	+	1408	5	NNC	ENSG00000164309.15	novel	12888	13	NA	NA	25700	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.54950975679639	133	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCGTGTTATGTGAAC	79784398	True	NA	NA	False	AATAAA	-18	NA	79784452	79800222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79784600_79788970_79789105_79790969_79791070_79793436_79793611_79799369
transcript_113789.known	chr5	-	4778	8	FSM	ENSG00000177034.17	ENST00000509852.6	4778	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	15.9232854778203	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAAAAACCCT	-79989336	True	NA	NA	False	NA	NA	NA	79991259	79979776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79983795_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_113792.known	chr5	-	7931	9	FSM	ENSG00000177034.17	ENST00000512528.3	7931	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.5703857907809	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCGATTTAATGTTATTT	-79989339	True	NA	0	True	AATAAA	-29	NA	79991262	79976715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_79983795_79985570_79985660_79986949_79987108_79988238_79988316_79988461_79988645_79989151_79989245_79990159_79990237_79990593_79990664_79991157
transcript_113798.nnic	chr5	+	777	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-8	-35807	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	36.5	110	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGCTGTCTCCTGTGTAT	79990714	True	NA	7	True	AATAAA	-21	NA	79991302	80020099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79991413_79998331_79998376_80019476
transcript_113799.nnic	chr5	+	735	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-9	-35804	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	40	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCCTGTGTATGTG	79990713	True	NA	10	True	AATAAA	-24	NA	79991301	80020102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79991413_79998331_79998376_80019522
transcript_113800.nnic	chr5	+	529	3	NNC	ENSG00000113296.14	novel	573	5	NA	NA	-17	-35804	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_2	34	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCCTGTGTATGTG	79990705	True	NA	10	True	AATAAA	-24	NA	79991293	80020102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_79991413_79998331_79998376_80019736
transcript_113804.known	chr5	-	6448	12	FSM	ENSG00000164300.17	ENST00000507668.7	6448	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.9910039396156	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATGTTTTGAAATATGT	-80242368	True	NA	-12	True	AATAAA	-24	NA	80256048	80138726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80143811_80146089_80146235_80147244_80147285_80150881_80150949_80158835_80158963_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_113806.nnic	chr5	-	1228	8	NNC	ENSG00000164300.17	novel	547	4	NA	NA	1	-8379	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	22.5162073146597	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAAGTTGTTTCCTCTTTT	-80242367	True	NA	NA	False	AATAAA	-18	NA	80256047	80165372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80165617_80166382_80166479_80169334_80169547_80174953_80175048_80177314_80177398_80177885_80178065_80202885_80203054_80255895
transcript_113809.known	chr5	+	10805	19	FSM	ENSG00000039319.17	ENST00000505560.5	10805	19	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	24.5062350342837	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGGGATTTTCAATGC	80406373	True	NA	NA	False	AATAAA	-16	NA	80408063	80483379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80408154_80427491_80427546_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_113810.known	chr5	+	6773	18	FSM	ENSG00000039319.17	ENST00000338008.9	6773	18	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.6696157090046	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGCTATTCAACAAACTT	80406322	True	NA	108	True	AGTAAA	-20	NA	80408012	80479350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80408154_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_113814.known	chr5	+	1586	6	FSM	ENSG00000152380.10	ENST00000282226.5	1586	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTCACGGCTCATTCC	80487941	True	NA	NA	False	AGTAAA	-14	NA	80488099	80542563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80488149_80501791_80501918_80513603_80513770_80519692_80519911_80522002_80522139_80541672
transcript_113823.known	chr5	+	6680	19	FSM	ENSG00000039319.17	ENST00000510158.5	6680	19	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	25.381533094402	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTGTAGACATATAGT	80406333	True	NA	26	True	AATAAA	-44	NA	80408023	80479140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_80408154_80411645_80411774_80434108_80434218_80436755_80439008_80439935_80440033_80443122_80443285_80445262_80445406_80448025_80448405_80449590_80449714_80450430_80450587_80451484_80451710_80455691_80455775_80456460_80456566_80456944_80457093_80459413_80459495_80472760_80472924_80473753_80473860_80474662_80474831_80477218
transcript_113827.nnic	chr5	+	872	4	NNC	ENSG00000152380.10	novel	1586	6	NA	NA	-35	3287	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	1.63299316185545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCATTCTGAGCAGTGTGG	NA	False	NA	NA	False	AATAAA	-20	NA	80487933	80516948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80488149_80501791_80501918_80513603_80513770_80516583
transcript_11383.known	chr1	+	1022	5	FSM	ENSG00000160752.15	ENST00000461507.5	1022	5	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	604.062651965837	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCCTATCAGACTGAGA	155287249	True	NA	NA	False	NA	NA	NA	155308802	155318663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310063_155310206_155312254_155312396_155317940_155318022_155318168
transcript_113831.nnic	chr5	+	1928	3	NNC	ENSG00000240003.2	novel	752	2	NA	NA	-141977	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAACAAGTCAAGATCTA	NA	False	NA	NA	False	AGTAAA	-42	NA	80358354	80501486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80359395_80500271_80500998_80501324
transcript_113833.nnic	chr5	+	1905	3	NNC	ENSG00000240003.2	novel	752	2	NA	NA	-141972	86	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAACAAGTCAAGATCTA	NA	False	NA	NA	False	AGTAAA	-42	NA	80358359	80501486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80359377_80500271_80500998_80501324
transcript_113847.nic	chr5	+	478	3	ISM	ENSG00000039319.17	ENST00000510995.1	2873	4	-81	3404	-11	-187	5prime_fragment	FALSE	canonical	3	62	junction_1	7	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACAGGACTTGATCTTC	80406311	True	NA	NA	False	AATGAA	-42	NA	80408001	80436972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_80408154_80434108_80434218_80436755
transcript_113848.nnic	chr5	-	1064	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	-30	-3100	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	44	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTCCACTTGTTTCT	-80488095	False	NA	NA	False	AGTAAA	-24	NA	80488125	80482260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80482941_80486184_80486221_80487777
transcript_113849.nnic	chr5	+	541	3	NNC	ENSG00000152380.10	novel	508	4	NA	NA	-35	-5653	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTGGTCTTGGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	80487933	80505154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_80488149_80501791_80501918_80504954
transcript_113858.nnic	chr5	-	475	3	NNC	ENSG00000249042.6	novel	5383	3	NA	NA	-30	-3689	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	66	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATTTCATTTTCTT	-80488095	False	NA	NA	False	AGTAAA	-15	NA	80488125	80482849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80482941_80486184_80486221_80487777
transcript_113865.nnic	chr5	-	1583	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-131	-4737	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	0.942809041582063	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTGAGCAAACAAAG	-80570240	True	NA	NA	False	NA	NA	NA	80570411	80564705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80565827_80566688_80566775_80568959_80569078_80570153
transcript_113866.nnic	chr5	-	1648	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-166	-4737	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.942809041582063	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAGTGAGCAAACAAAG	-80570275	True	NA	NA	False	NA	NA	NA	80570446	80564705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80565827_80566688_80566775_80568959_80569108_80570153
transcript_113869.nnic	chr5	-	673	4	NNC	ENSG00000189127.8	novel	3730	5	NA	NA	-166	-6428	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.94392028877595	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTGTCTGATTCCTGGG	-80570275	True	NA	NA	False	AATAAA	-24	NA	80570446	80566396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80566543_80566688_80566775_80568959_80569108_80570153
transcript_113871.known	chr5	-	3730	5	FSM	ENSG00000189127.8	ENST00000338682.8	3730	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_2	5.16599457994296	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTACTGATTTTTAT	-80570109	False	171	0	True	AATAAA	-15	NA	80570280	80556754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80560043_80563734_80563816_80566688_80566775_80568959_80569108_80570153
transcript_113875.known	chr5	-	1719	7	FSM	ENSG00000228716.7	ENST00000505337.5	1719	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	297.651222070396	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGGCTAGTCTCGAACT	-80653275	False	NA	NA	False	NA	NA	NA	80654674	80628016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80628939_80629038_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_113880.known	chr5	-	3919	6	FSM	ENSG00000228716.7	ENST00000439211.7	3919	6	0	0	0	0	multi-exon	FALSE	canonical	3	706	junction_1	66.6855306644552	1546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCCTCCTGTTGTTCTT	-80653584	True	NA	0	True	AATAAA	-22	NA	80654983	80626225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_113883.known	chr5	-	1447	5	FSM	ENSG00000228716.7	ENST00000504396.1	1447	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	310.367826135378	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTTTTTTAGACAGC	-80653159	False	NA	NA	False	NA	NA	NA	80654558	80628222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80629166_80633876_80633993_80637882_80638010_80649388_80649495_80654403
transcript_113884.known	chr5	-	1474	5	FSM	ENSG00000228716.7	ENST00000511032.5	1474	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	360.349396419642	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTCCTGCCTCAGGCTC	-80653153	False	NA	NA	False	NA	NA	NA	80654552	80628123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80629166_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_113886.nic	chr5	-	838	5	ISM	ENSG00000228716.7	ENST00000505337.5	1719	7	57	5635	57	-4588	5prime_fragment	FALSE	canonical	3	707	junction_1	60.5573075689466	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGCACAGTGACTCAT	-80653218	False	NA	NA	False	AATAAA	-19	NA	80654617	80633651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_80633993_80637882_80638010_80649388_80649495_80654007_80654058_80654403
transcript_113891.nnic	chr5	-	1299	5	NNC	ENSG00000251450.2	novel	535	4	NA	NA	-576	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6.25999201277446	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	-80961472	True	NA	-4	True	AATAAA	-16	NA	80961483	80947696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80947995_80948328_80948405_80949760_80949949_80951446_80951481_80960780
transcript_113897.known	chr5	-	535	4	FSM	ENSG00000251450.2	ENST00000505694.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	3.29983164553722	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	-80960896	False	NA	-4	True	AATAAA	-16	NA	80960907	80947696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_80947995_80948328_80948405_80951446_80951481_80960780
transcript_113898.nnic	chr5	-	720	4	NNC	ENSG00000251450.2	novel	535	4	NA	NA	-341	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.84573486395988	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	-80961237	False	NA	-4	True	AATAAA	-16	NA	80961248	80947696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80947995_80948328_80948405_80951446_80951481_80960936
transcript_113899.nnic	chr5	-	619	4	NNC	ENSG00000251450.2	novel	535	4	NA	NA	-581	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.84573486395988	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTACTATTTAATAAGTTC	-80961477	True	NA	-4	True	AATAAA	-16	NA	80961488	80947696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_80947995_80948328_80948405_80951446_80951481_80961277
transcript_113901.known	chr5	-	909	3	FSM	ENSG00000247572.9	ENST00000505295.1	909	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATAGTGAGGGG	-81299467	True	NA	NA	False	NA	NA	NA	81301560	81244857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81245410_81246889_81246973_81301286
transcript_113904.known	chr5	-	601	2	FSM	ENSG00000247572.9	ENST00000512287.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCAAGCCCTTTTGTTAA	-81299430	True	NA	NA	False	ATTAAA	-16	NA	81301523	81235758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81236123_81301286
transcript_113905.known	chr5	-	2063	2	FSM	ENSG00000247572.9	ENST00000669977.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTAAAAAAGAAAATTTT	-81299472	True	NA	-30	True	AGTAAA	-1	NA	81301565	81237576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81239361_81301286
transcript_113906.known	chr5	-	2373	2	FSM	ENSG00000247572.9	ENST00000663674.1	2373	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTCGAAATCCTGTAAAAT	-81299379	True	NA	NA	False	NA	NA	NA	81301472	81201340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81203528_81301286
transcript_113909.known	chr5	+	1476	10	FSM	ENSG00000131730.16	ENST00000254035.9	1476	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.2704627669473	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	81233115	True	NA	NA	False	AATAAA	-16	NA	81233321	81266398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_113911.nic	chr5	+	1503	9	NIC	ENSG00000131730.16	novel	1476	10	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	5.54385921538417	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGCTTTGTTTCTCTGA	81233002	True	NA	NA	False	AATAAA	-16	NA	81233208	81266398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81257732_81257857_81259119_81259255_81263490_81263617_81266138
transcript_113913.nic	chr5	+	1333	8	ISM	ENSG00000131730.16	ENST00000254035.9	1476	10	-113	7014	-111	0	5prime_fragment	FALSE	canonical	2	4	junction_4	5.77468083754507	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAAGTTTGCCTCCAA	81233002	True	NA	NA	False	TATAAA	-10	NA	81233208	81259384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81256914_81257001_81257732_81257857_81259119
transcript_113917.nic	chr5	+	1049	6	NIC	ENSG00000131730.16	novel	1476	10	NA	NA	-111	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	6.78232998312527	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACACTATGGTAACTTC	81233002	True	NA	19	True	AATAAA	-26	NA	81233208	81257923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_81233378_81251112_81251285_81252694_81252894_81254395_81254492_81254992_81255215_81257732
transcript_113925.known	chr5	+	1248	6	FSM	ENSG00000131732.12	ENST00000438268.2	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.5382547100429	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACAGCTAGCACTATCATG	81298139	True	NA	NA	False	AAAACA	-28	NA	81301640	81312662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81302056_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_113929.known	chr5	+	768	5	FSM	ENSG00000131732.12	ENST00000507402.5	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	88.0720585656995	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATAACCAAGTAGTTGTA	81298088	True	NA	NA	False	ATTAAA	-41	NA	81301589	81312917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301671_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_113933.known	chr5	+	818	5	FSM	ENSG00000131732.12	ENST00000506458.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	85.0573336050455	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTATGCATAAATGTAAAA	81298121	True	NA	NA	False	TATAAA	-6	NA	81301622	81312972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301699_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_113939.known	chr5	+	1580	6	FSM	ENSG00000131732.12	ENST00000407610.8	1580	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	46.6193093041928	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAGGATTCCAAGTTAC	81298085	True	NA	NA	False	AATAAA	-30	NA	81301586	81313297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301699_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_11394.known	chr1	+	630	4	FSM	ENSG00000160752.15	ENST00000471117.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1113.60346024367	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGAAGAAAGGGTG	155287309	True	NA	-38	True	AAGAAA	-17	NA	155308862	155318473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155312254_155312396_155317940_155318022_155318168
transcript_113940.known	chr5	+	1372	6	FSM	ENSG00000131732.12	ENST00000380199.9	1372	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	64.9812280585709	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATAATTTTTCTGAATA	81298122	True	NA	21	True	AATAAA	-35	NA	81301623	81313154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81301671_81304740_81305142_81308560_81308712_81308945_81309039_81311210_81311280_81312543
transcript_113941.known	chr5	-	612	5	FSM	ENSG00000172497.9	ENST00000513751.1	612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTCTTTTCTTAGAGCAC	-81394160	True	NA	NA	False	AGTAAA	-43	NA	81394179	81359851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81360039_81363787_81363890_81371749_81371811_81385756_81385827_81393987
transcript_113944.known	chr5	-	8780	17	FSM	ENSG00000145687.17	ENST00000320672.9	8841	17	-156	217	0	-217	multi-exon	TRUE	canonical	3	116	junction_14	17.8648353966668	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGTGTATATAATTGAA	-81751234	False	NA	NA	False	CATAAA	-24	NA	81751253	81413020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_113947.known	chr5	-	4465	17	FSM	ENSG00000145687.17	ENST00000615665.4	4465	17	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	39.789288759665	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTCTTAACTACGT	-81751234	False	NA	NA	False	AATACA	-23	NA	81751253	81417359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_113951.known	chr5	-	1790	16	FSM	ENSG00000145687.17	ENST00000514493.5	1790	16	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	41.4340707898973	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATCCTGTGAATCACAA	-81751231	False	NA	-16	True	AATAAA	-42	NA	81751250	81419917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_113953.nic	chr5	-	1903	15	NIC	ENSG00000145687.17	novel	8841	17	NA	NA	-209	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_14	36.5106218819138	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-34	True	AATAAA	-24	NA	81616794	81419935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467042_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81616348
transcript_113966.nnic	chr5	-	1175	9	NNC	ENSG00000145687.17	novel	566	8	NA	NA	-43	499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	48.6486125187553	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGAGCTTTTTGCCTC	-81751277	False	NA	NA	False	AATAAA	-35	NA	81751296	81473200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_81473552_81473699_81473771_81474495_81474563_81489249_81489310_81513627_81513718_81615472_81615558_81636556_81636619_81650266_81650340_81750980
transcript_113972.known	chr5	-	1396	13	FSM	ENSG00000145687.17	ENST00000504985.5	1396	13	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	44.6308158363952	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCGTCTGATGCAAG	NA	False	NA	-34	True	AATAAA	-24	NA	81513717	81419935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_81420534_81428584_81428684_81437429_81437459_81440557_81440637_81442652_81442724_81446867_81446923_81448789_81448826_81461054_81461104_81466973_81467066_81473699_81473771_81474495_81474563_81489249_81489310_81513627
transcript_113979.known	chr5	+	1795	9	FSM	ENSG00000152348.16	ENST00000458350.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	32.8878301959859	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGTTATAAACATGACC	81971578	False	NA	20	True	ATTAAA	-26	NA	81972050	82254792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81972307_81976192_81976328_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_113984.known	chr5	+	3029	8	FSM	ENSG00000152348.16	ENST00000282185.8	3029	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	12.4408806040441	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAATGGTGTTCTTGTCT	81972003	False	NA	4	True	AATAAA	-17	NA	81972022	82256133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82164398_82164538_82178489_82178588_82252561_82252660_82253313_82253430_82254067
transcript_1140.known	chr1	-	1544	4	FSM	ENSG00000162585.17	ENST00000420515.1	1544	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	460.068352409605	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGACATTTTGTGCATTT	-2181845	True	NA	NA	False	NA	NA	NA	2194748	2191900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2192976_2193638_2193911_2193997_2194134_2194687
transcript_114017.known	chr5	+	1438	4	FSM	ENSG00000152348.16	ENST00000355178.8	1438	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	54.8148398398341	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTATTTTTCTGTGAGT	81971552	True	NA	NA	False	AATAAA	-20	NA	81972024	82148117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_81972307_81987558_81987679_82058494_82058603_82147189
transcript_11402.known	chr1	+	1198	10	FSM	ENSG00000160752.15	ENST00000612683.1	1198	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	716.354626297118	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTCTCAATAAATAATCGT	155287416	True	NA	-1	True	NA	NA	NA	155308969	155320637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155309077_155310063_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_114024.known	chr5	+	904	3	FSM	ENSG00000152348.16	ENST00000514253.2	904	3	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_2	44	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAGAAAAAAGGTAT	NA	False	NA	NA	False	NA	NA	NA	82164444	82276857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_82164538_82178489_82178588_82276144
transcript_11403.known	chr1	+	1256	10	FSM	ENSG00000160752.15	ENST00000447866.5	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	519.73450012221	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGAGATTGCAAGGGCGG	155308761	False	NA	-29	True	GGGGCT	-32	NA	155308793	155320609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319793_155319929_155320408
transcript_114033.known	chr5	-	595	4	FSM	ENSG00000186468.13	ENST00000503605.1	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	769	junction_3	6064.2309945743	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCCCTATACAAAG	-82278052	False	NA	-113	True	NA	NA	NA	82278143	82276154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82277930
transcript_114037.known	chr5	-	3252	4	FSM	ENSG00000186468.13	ENST00000296674.13	3252	4	0	0	0	0	multi-exon	FALSE	canonical	3	10370	junction_3	1541.98407543298	182791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGAGGTTTTGTCTGC	-82082969	True	NA	-10	True	AATAAA	-17	NA	82278354	82273319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276256_82276397_82276519_82277692_82277853_82278319
transcript_114038.known	chr5	-	576	3	FSM	ENSG00000186468.13	ENST00000504293.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	13479	junction_1	151.5	52706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATCTTACTGTCCC	-82277860	False	NA	-18	True	AATAAA	-19	NA	82277951	82276059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276256_82276397_82276519_82277692
transcript_114039.known	chr5	-	836	3	FSM	ENSG00000186468.13	ENST00000507980.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	10370	junction_2	1706	3794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTCATCCTGTGGAATAA	-82082969	True	NA	-78	True	NA	NA	NA	82278354	82275877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_82276519_82277692_82277853_82278319
transcript_11404.known	chr1	+	808	5	FSM	ENSG00000160752.15	ENST00000495308.5	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	649.245331134541	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTAAGTTTTGGGGCTT	155287339	True	NA	7	True	GATAAA	-21	NA	155308892	155318518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155308966_155310042_155310206_155312254_155312396_155317940_155318022_155318168
transcript_11405.known	chr1	+	2017	2	FSM	ENSG00000160752.15	ENST00000487002.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	155287360	True	NA	NA	False	NA	NA	NA	155308913	155312979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155310206_155312254
transcript_11406.known	chr1	+	680	4	FSM	ENSG00000160752.15	ENST00000490140.1	680	4	0	0	0	0	multi-exon	FALSE	canonical	3	2327	junction_2	142.592659932644	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155318638	True	NA	27	True	AATAAA	-16	NA	155318718	155320665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155318929_155319610_155319689_155319793_155319929_155320408
transcript_114061.nnic	chr5	+	825	2	Antisense	novelGene_ENSG00000248112.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTCTTGCTTTAAGAAT	82872196	True	NA	NA	False	ATTAAA	-43	NA	82872399	82925444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_82872832_82925051
transcript_11407.known	chr1	+	673	6	FSM	ENSG00000160752.15	ENST00000492244.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	1007.79692398816	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGTTCTGTTCTTGCT	155318045	True	NA	27	True	AATAAA	-16	NA	155318187	155320665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155318292_155318664_155318754_155318855_155318929_155319610_155319689_155319856_155319929_155320408
transcript_114070.known	chr5	+	1243	8	FSM	ENSG00000152422.16	ENST00000542685.5	1243	8	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_7	53.1516889742586	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	83074731	True	NA	21	True	AATAAA	-21	NA	83077556	83311069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_114071.known	chr5	+	1602	8	FSM	ENSG00000152422.16	ENST00000396027.9	1602	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	20.6318556942354	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTGTTTTTAATAAA	83074721	True	NA	13	True	AATAAA	-18	NA	83077546	83353760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
transcript_114073.nic	chr5	+	1260	8	NIC	ENSG00000152422.16	novel	1243	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_7	61.4966400276786	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTTGTGGTAGTTTGTG	83074761	True	NA	21	True	AATAAA	-21	NA	83077586	83311069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83310788
transcript_114074.known	chr5	+	1696	8	FSM	ENSG00000152422.16	ENST00000282268.7	1696	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	42.0830083506008	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTTTGTGTTTTTAATA	83074672	True	NA	11	True	AATAAA	-16	NA	83077497	83353758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077663_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353130
transcript_114085.known	chr5	+	1579	8	FSM	ENSG00000152422.16	ENST00000338635.10	1579	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	55.7746925274413	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTACATAAACATTGTGAAAA	83074701	True	NA	-36	True	AATATA	-11	NA	83077526	83353711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83077616_83104909_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529_83258678_83353124
transcript_114086.known	chr5	+	1567	6	FSM	ENSG00000152422.16	ENST00000509268.1	1567	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	17.9064234284795	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAAGTTTTTGTTAATTCA	NA	False	NA	NA	False	NA	NA	NA	83104907	83259339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83105059_83111027_83111204_83195769_83195937_83203551_83203708_83204814_83204922_83258529
transcript_114088.known	chr5	-	3353	5	FSM	ENSG00000174695.10	ENST00000511450.5	3353	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1133.74762954548	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGAGTAAAAATGAGCAG	-83056146	True	NA	NA	False	AATAAA	-17	NA	83077367	83054061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83071362_83071431_83077320
transcript_114093.known	chr5	-	562	4	FSM	ENSG00000174695.10	ENST00000503892.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	1060.19128253139	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATCAACCTCAGTACTG	-83077788	True	NA	0	True	TATAAA	-31	NA	83077863	83056883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077717
transcript_114096.known	chr5	-	596	3	FSM	ENSG00000174695.10	ENST00000504622.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1101	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATCTTTATAGAATGAGA	-83056232	True	NA	-88	True	NA	NA	NA	83077453	83056726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83077320
transcript_114099.known	chr5	-	492	2	FSM	ENSG00000174695.10	ENST00000509770.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTACTCAAGTTCCTTT	-83056203	True	NA	49	True	AAAACA	-8	NA	83077424	83056766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83077320
transcript_114101.known	chr5	-	4528	4	FSM	ENSG00000174695.10	ENST00000502346.2	4528	4	0	0	0	0	multi-exon	FALSE	canonical	3	1958	junction_3	151.422147213235	5163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCCTCCTACTTTTGTCTT	-83056173	True	NA	-9	True	AATAAA	-20	NA	83077394	83052845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83057155_83061876_83061912_83065007_83065118_83077320
transcript_114103.known	chr5	+	8483	8	FSM	ENSG00000038427.16	ENST00000513016.5	8483	8	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_7	88.7121002721381	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAAATTTTGTATAT	83535603	False	NA	NA	False	AAAACA	-25	NA	83535613	83581336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83542269_83545536_83545651_83547970_83548085_83553363_83553523_83554955_83555039_83572415_83572561_83579979_83580163_83580306
transcript_114104.known	chr5	+	3973	7	FSM	ENSG00000038427.16	ENST00000513960.5	3973	7	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_6	29.2175746198528	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGAAGAAAGTACAAA	83468629	True	NA	NA	False	NA	NA	NA	83471776	83539684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102_83512397_83537006
transcript_114105.known	chr5	+	1825	6	FSM	ENSG00000038427.16	ENST00000513984.5	1825	6	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	15.6409718368137	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGCCTTCTAATCATTA	83468643	False	NA	NA	False	AATAAA	-29	NA	83471790	83512940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_83472024_83483512_83483589_83490097_83490473_83493545_83493721_83493803_83493932_83512102
transcript_114106.nic	chr5	+	1089	3	ISM	ENSG00000038427.16	ENST00000513984.5	1825	6	-629	22692	-456	6644	5prime_fragment	FALSE	canonical	3	261	junction_2	5.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAAGATTTGAAAGAGA	83471034	False	NA	19	True	NA	NA	NA	83471161	83490248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_83472024_83483512_83483589_83490097
transcript_114107.known	chr5	-	4849	5	FSM	ENSG00000145681.11	ENST00000274341.9	4849	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.22841614740048	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTCTTCTCTTTAGC	-83720291	True	NA	NA	False	ATTAAA	-21	NA	83720855	83637804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83641786_83644362_83644666_83652452_83652825_83673423_83673550_83720788
transcript_114109.known	chr5	-	560	4	FSM	ENSG00000145681.11	ENST00000515590.1	560	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	37.7123616632825	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGACTTACAAGGTATGTA	-83720797	False	NA	NA	False	NA	NA	NA	83720813	83652465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83652825_83673423_83673550_83675287_83675338_83720788
transcript_11411.known	chr1	+	911	2	FSM	ENSG00000235919.5	ENST00000456633.2	1225	2	16	298	16	-298	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCTTTTCATTCAGT	155561950	True	NA	NA	False	AAGAAA	-1	NA	155562041	155563646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155562287_155562980
transcript_114110.nic	chr5	-	1992	3	ISM	ENSG00000145681.11	ENST00000274341.9	4849	5	-466	13687	-466	528	5prime_fragment	FALSE	canonical	3	64	junction_2	8	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGACCTTTCGTTGT	-83721305	False	NA	NA	False	AATAAA	-23	NA	83721321	83651491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_83652825_83673423_83673550_83720788
transcript_114112.nic	chr5	-	1141	3	ISM	ENSG00000145681.11	ENST00000274341.9	4849	5	-466	14538	-466	123	5prime_fragment	FALSE	canonical	3	64	junction_2	8	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGCCTGGCATCTTAT	-83721305	False	NA	NA	False	AATAAA	-14	NA	83721321	83652342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_83652825_83673423_83673550_83720788
transcript_114115.known	chr5	-	4814	11	FSM	ENSG00000164176.13	ENST00000296591.10	4814	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	54.5468605879385	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATTGTCTGAATGTGA	-84383998	True	NA	33	True	ATTAAA	-17	NA	84384880	83940553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_114116.known	chr5	-	4244	10	FSM	ENSG00000164176.13	ENST00000380138.3	4244	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_8	45.3431361950185	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGATTCTTTTGAAGCAGT	-84379545	True	NA	-13	True	AATAAA	-13	NA	84384386	83940599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_83943569_83963204_83963361_84060299_84060485_84064699_84064845_84066450_84066607_84106648_84106831_84137240_84137355_84180392_84180522_84254083_84254213_84384307
transcript_114118.nic	chr5	-	1470	5	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	275	195917	-219	-29811	5prime_fragment	FALSE	canonical	3	149	junction_3	68.0238928612587	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAAAAAAGTAGTAACAG	-84384594	False	NA	NA	False	AAAAAG	-12	NA	84384605	84136470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_84137355_84180392_84180522_84229854_84229885_84254083_84254213_84384307
transcript_114119.nic	chr5	-	840	4	ISM	ENSG00000164176.13	ENST00000296591.10	4814	11	405	239455	-89	-73349	5prime_fragment	FALSE	canonical	3	149	junction_2	65.2908024831131	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACACAAAACTGCCACC	-84384464	False	NA	NA	False	NA	NA	NA	84384475	84180008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_84180522_84229854_84229885_84254083_84254213_84384307
transcript_11412.known	chr1	+	909	2	FSM	ENSG00000235919.5	ENST00000452809.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGTTAGGTTTCTGTGG	155561981	False	NA	8	True	AATAAA	-15	NA	155562072	155563944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155562287_155563249
transcript_114129.known	chr5	+	265	4	FSM	ENSG00000250320.7	ENST00000515688.6	703	4	96	342	-16	-342	multi-exon	FALSE	canonical	2	3	junction_1	4.64279609239471	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATAGTGGCTCATGC	84383536	True	NA	NA	False	NA	NA	NA	84384555	84417316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84384600_84387821_84387937_84399584_84399653_84417278
transcript_114135.nnic	chr5	+	519	3	NIC	ENSG00000250320.7	novel	703	4	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATTCCCTTTATTTCT	84383509	True	NA	4	True	TATAAA	-24	NA	84384528	84417658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_84384600_84399584_84399653_84417278
transcript_114138.known	chr5	+	2404	2	FSM	ENSG00000250320.7	ENST00000653332.1	2404	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTGTATATATAGTG	84382404	True	NA	NA	False	NA	NA	NA	84382486	84390173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84382539_84387821
transcript_114139.known	chr5	+	3389	2	FSM	ENSG00000250320.7	ENST00000670929.1	3389	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCATGTGTGTTTTTACA	84384352	False	NA	NA	False	TATAAA	-36	NA	84384408	84391019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84384600_84387821
transcript_114140.known	chr5	+	2615	2	FSM	ENSG00000250320.7	ENST00000661098.1	2615	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACACATTTTGCACATG	84384763	False	NA	NA	False	NA	NA	NA	84384821	84390381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_84384879_84387823
transcript_114142.nnic	chr5	-	975	6	Antisense	novelGene_ENSG00000251066.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.0591260281974	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTGTTCATTAGCTTC	-85647652	True	NA	NA	False	AATAAA	-18	NA	85647824	85544066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_85544294_85620097_85620194_85629687_85629815_85633293_85633430_85635203_85635253_85647484
transcript_114146.nnic	chr5	+	893	4	Genic_Genomic	ENSG00000250874.1	novel	1453	1	NA	NA	-105	2545	multi-exon	FALSE	non_canonical	0	0	junction_1	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAGTGAAGGATGA	NA	False	NA	NA	False	NA	NA	NA	85663126	85667229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_85663419_85663703_85663903_85664377_85664469_85666918
transcript_114148.nnic	chr5	+	684	4	Genic_Genomic	ENSG00000250874.1	novel	1453	1	NA	NA	-16	2545	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAGTGAAGGATGA	85663185	True	NA	NA	False	NA	NA	NA	85663215	85667229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_85663299_85663703_85663903_85664377_85664469_85666918
transcript_114150.nnic	chr5	+	1164	3	Genic_Genomic	ENSG00000250874.1	novel	1453	1	NA	NA	-91	2545	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAGTGAAGGATGA	NA	False	NA	NA	False	NA	NA	NA	85663140	85667229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_85663903_85664377_85664469_85666918
transcript_114152.known	chr5	+	496	4	FSM	ENSG00000127184.13	ENST00000505430.5	496	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	393.308473790682	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572649	True	NA	24	True	AATAAA	-14	NA	86617940	86620766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618054_86619352_86619497_86619738_86619879_86620667
transcript_114157.known	chr5	+	369	3	FSM	ENSG00000127184.13	ENST00000511472.5	369	3	0	0	0	0	multi-exon	TRUE	canonical	3	877	junction_1	5115.5	8230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572636	True	NA	24	True	AATAAA	-14	NA	86617927	86620766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618054_86619352_86619497_86620667
transcript_114159.known	chr5	+	693	3	FSM	ENSG00000127184.13	ENST00000513124.1	693	3	0	0	0	0	multi-exon	FALSE	canonical	1	81	junction_2	398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572694	True	NA	24	True	AATAAA	-14	NA	86617985	86620766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618054_86619352_86619879_86620667
transcript_114168.known	chr5	+	581	3	FSM	ENSG00000127184.13	ENST00000510447.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	1	66	junction_1	5521	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATACAAATCGATCTTAG	86618161	False	NA	-3	True	AATAAA	-4	NA	86618174	86620948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618331_86619352_86619497_86620667
transcript_114171.known	chr5	+	629	3	FSM	ENSG00000127184.13	ENST00000247655.4	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	11108	junction_2	202.5	54570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTATTTCTATGA	86572649	True	NA	11	True	AATAAA	-18	NA	86617940	86620962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618131_86619352_86619497_86620667
transcript_114172.known	chr5	+	347	3	FSM	ENSG00000127184.13	ENST00000515763.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	5743.5	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAATGCCTCTTTTTTG	86572681	True	NA	24	True	AATAAA	-14	NA	86617972	86620766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618131_86619352_86619443_86620667
transcript_114173.known	chr5	+	1584	2	FSM	ENSG00000127184.13	ENST00000509578.1	1584	2	0	0	0	0	multi-exon	FALSE	canonical	3	11513	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAATGCTTAATGCCTCTT	86572664	True	NA	19	True	AATAAA	-9	NA	86617955	86620761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_86618131_86619352
transcript_114174.known	chr5	+	4746	25	FSM	ENSG00000145715.15	ENST00000274376.11	4746	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	28.3709309368273	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGATTACTTCTGTCTA	87266934	True	NA	11	True	AATAAA	-19	NA	87267882	87391916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_87268991_87331347_87331501_87332506_87332643_87333266_87333338_87337973_87338092_87341289_87341322_87346671_87346725_87349213_87349365_87353156_87353236_87362550_87362672_87363347_87363505_87369812_87369901_87372117_87372196_87374162_87374321_87374839_87374917_87376392_87376566_87376880_87377041_87378395_87378539_87379734_87379851_87380508_87380596_87383712_87383781_87385300_87385390_87386825_87386904_87389392_87389528_87390799
transcript_114188.known	chr5	-	1280	9	FSM	ENSG00000134480.16	ENST00000256897.9	1280	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	29.4403528341628	1828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87407496	True	NA	-11	True	AATAAA	-15	NA	87412930	87394273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412677
transcript_1142.known	chr1	-	569	3	FSM	ENSG00000162585.17	ENST00000378543.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_2	610.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTGCCGCTTTTCTTTCT	-2181847	True	NA	-5	True	ATTAAA	-40	NA	2194750	2189547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2189782_2193638_2193911_2194687
transcript_114200.known	chr5	-	451	4	FSM	ENSG00000134480.16	ENST00000511207.5	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_3	27.7968823191858	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGCTAGAATAGCACC	-87401758	False	NA	-17	True	AATAAA	-9	NA	87401774	87394279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701
transcript_114201.known	chr5	-	1497	9	FSM	ENSG00000134480.16	ENST00000504878.1	1497	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	141.007479854794	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGAATAGCACCTGTTTT	-87407470	True	NA	-11	True	AATAAA	-15	NA	87412904	87394273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87394485_87395043_87395105_87399393_87399506_87401701_87401773_87404843_87405008_87407975_87408187_87409289_87409364_87411223_87411347_87412434
transcript_114208.known	chr5	-	3751	3	FSM	ENSG00000287862.1	ENST00000655360.1	3751	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTCCGTCTAAAAAAAAA	-88052419	False	147	NA	False	NA	NA	NA	88052566	87864512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_87867877_88047588_88047695_88052285
transcript_114211.nnic	chr5	-	1527	3	NNC	ENSG00000287862.1	novel	1977	4	NA	NA	-224	-74267	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGATTATTGTATCTTT	-88052643	True	NA	NA	False	AATAAA	-21	NA	88052790	87938779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_87939696_88047588_88047695_88052285
transcript_114229.known	chr5	+	1550	7	FSM	ENSG00000247828.9	ENST00000656152.1	1550	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	43.0309965799848	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTATGCTGACTGAAAT	88266650	True	NA	NA	False	AAAAAG	-44	NA	88269033	88292275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435_88287623_88291383
transcript_114235.known	chr5	+	932	7	FSM	ENSG00000247828.9	ENST00000661351.1	932	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	40.5562024301531	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	88266631	True	NA	11	True	AATAAA	-23	NA	88269014	88287657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88269467_88269688_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_114249.known	chr5	+	711	6	FSM	ENSG00000247828.9	ENST00000662970.2	715	6	0	4	0	-2	multi-exon	FALSE	canonical	3	17	junction_4	37.9125309099775	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	88266631	True	NA	7	True	AATAAA	-19	NA	88269014	88287653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285740_88285852_88287435
transcript_114250.nic	chr5	+	745	6	FSM	ENSG00000247828.9	ENST00000688398.1	712	6	-37	4	1	-2	multi-exon	FALSE	canonical	3	22	junction_4	36.4549036482062	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTTTGTGGTAGTTTGT	88266594	True	NA	7	True	AATAAA	-19	NA	88268977	88287653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_114268.known	chr5	+	553	5	FSM	ENSG00000247828.9	ENST00000668037.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	44.9520577949442	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTGGTAGTTTGTTA	88269012	False	NA	9	True	AATAAA	-21	NA	88269063	88287655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282714_88282867_88287435
transcript_11427.known	chr1	-	2654	11	FSM	ENSG00000163374.20	ENST00000404643.5	2654	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	89.3955256151	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686449	True	NA	-3	True	AATAAA	-29	NA	155688757	155659445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_11428.known	chr1	-	2626	11	FSM	ENSG00000163374.20	ENST00000295566.8	2626	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	125.033155602824	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668718_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688929
transcript_114284.known	chr5	+	5261	4	FSM	ENSG00000247828.9	ENST00000669353.1	5261	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	47.6818157745231	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATAAATTTCTATTGTTT	88266533	True	NA	-19	True	NA	NA	NA	88268916	88287627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88282041_88282107_88282602
transcript_114292.known	chr5	+	3379	4	FSM	ENSG00000247828.9	ENST00000658478.1	3379	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	32.6190128606002	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTTTGAATAAATCAATGT	88266507	True	NA	NA	False	NA	NA	NA	88268890	88439332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88410072_88410195_88436272
transcript_114294.known	chr5	+	4644	4	FSM	ENSG00000247828.9	ENST00000660783.1	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	48.8898989794643	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTAAGTAACTTT	88266631	True	NA	11	True	NA	NA	NA	88269014	88287016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282602
transcript_1143.known	chr1	-	314	2	FSM	ENSG00000162585.17	ENST00000420964.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGGCTGAGGCGGG	-2212535	True	NA	NA	False	NA	NA	NA	2212574	2212170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2212459_2212548
transcript_11430.known	chr1	-	2723	11	FSM	ENSG00000163374.20	ENST00000355499.9	2723	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	54.7632175826074	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCATTGATTTGTGCA	-155686466	True	NA	-11	True	AATAAA	-21	NA	155688774	155659453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688070_155688202_155688658
transcript_114301.known	chr5	+	3315	4	FSM	ENSG00000247828.9	ENST00000671394.1	3315	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	35.9103822808329	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTAATGCAAGACCAGTG	88266631	True	NA	NA	False	NA	NA	NA	88269014	88439300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88436272
transcript_114303.known	chr5	+	5642	4	FSM	ENSG00000247828.9	ENST00000659938.1	5642	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	51.8544972870135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGAAAAGTGGAAATCTC	88266652	True	NA	-28	True	AATAGA	-31	NA	88269035	88286977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88269467_88270586_88282041_88282107_88282602
transcript_114309.known	chr5	+	3439	3	FSM	ENSG00000247828.9	ENST00000661377.2	3521	3	82	0	20	0	multi-exon	FALSE	canonical	3	101	junction_1	10.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAATTACAAAATTA	88266569	True	NA	NA	False	NA	NA	NA	88268952	88285345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88282041
transcript_114313.known	chr5	+	585	3	FSM	ENSG00000247828.9	ENST00000504922.6	633	3	48	0	1	0	multi-exon	FALSE	canonical	2	40	junction_2	30.5	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTTGATGAACTATAC	88266532	True	NA	33	True	AATAAA	-37	NA	88268915	88436685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88270525_88270586_88436272
transcript_114317.known	chr5	+	3391	3	FSM	ENSG00000247828.9	ENST00000659005.2	3454	3	63	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	7	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCCCCATCTGTACAAA	88269047	True	NA	NA	False	NA	NA	NA	88269077	88285330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041
transcript_114320.known	chr5	+	552	3	FSM	ENSG00000247828.9	ENST00000657972.2	558	3	0	6	0	-1	multi-exon	FALSE	canonical	2	40	junction_2	34	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATATTTGGTTTCTTGTG	88266640	True	NA	16	True	AATAAA	-43	NA	88269023	88436668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88436272
transcript_114324.known	chr5	+	4976	2	FSM	ENSG00000247828.9	ENST00000664347.1	4976	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCTTAGCTTCCCAGA	88266515	True	NA	NA	False	NA	NA	NA	88268898	88274314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269028_88269467
transcript_114326.known	chr5	+	15798	6	FSM	ENSG00000247828.9	ENST00000670451.1	15798	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	25.0391693152948	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCCAGGGATGCAAGCATA	88266632	True	NA	NA	False	AATACA	-20	NA	88269015	88293988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88269467_88282107_88282714_88282867_88285740_88285852_88287435_88287623_88291383
transcript_114327.known	chr5	+	645	6	FSM	ENSG00000247828.9	ENST00000507736.2	645	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	40.4207867315816	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTTTGTTACA	88266654	True	NA	11	True	AATAAA	-23	NA	88269037	88287657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269076_88270525_88270586_88282041_88282107_88282714_88282867_88285743_88285852_88287435
transcript_114328.known	chr5	+	717	7	FSM	ENSG00000247828.9	ENST00000506584.5	717	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	44.7275704186529	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGGTAGTTTGTTAC	88269025	True	NA	10	True	AATAAA	-22	NA	88269046	88287656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88282041_88282107_88282756_88282867_88283009_88283087_88285740_88285852_88287435
transcript_114329.known	chr5	+	824	5	FSM	ENSG00000247828.9	ENST00000513694.2	824	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	43.8919126947095	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTTTCTTGTGATTT	88266655	True	NA	20	True	AATAAA	-24	NA	88269038	88436672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525_88270586_88410072_88410195_88426640_88426802_88436272
transcript_114330.known	chr5	+	2715	2	FSM	ENSG00000247828.9	ENST00000655966.1	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAGAGCGAGACTATC	88266631	True	NA	NA	False	NA	NA	NA	88269014	88273135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88269120_88270525
transcript_114337.known	chr5	-	2750	12	FSM	ENSG00000164180.14	ENST00000296595.11	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_2	8.70736365487177	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAATAGGACTTGTTTTA	-88267832	True	NA	NA	False	NA	NA	NA	88268845	88195046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_88196489_88197668_88197766_88198975_88199151_88202961_88203076_88205813_88205955_88206438_88206500_88207028_88207181_88220562_88220720_88225768_88225867_88228444_88228529_88240812_88240917_88268720
transcript_11435.known	chr1	-	2524	10	FSM	ENSG00000163374.20	ENST00000347088.9	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	117.110584017367	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155686390	True	NA	-3	True	AATAAA	-29	NA	155688698	155659445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688658
transcript_114359.nic	chr5	-	359	3	ISM	ENSG00000164180.14	ENST00000515477.5	689	6	-40	7826	-30	0	5prime_fragment	FALSE	canonical	3	72	junction_2	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATTGAGCTTGTAAAG	-88267874	True	NA	NA	False	AAAAAG	-24	NA	88268887	88228440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_88228529_88240812_88240917_88268720
transcript_11436.known	chr1	-	2555	10	FSM	ENSG00000163374.20	ENST00000368330.6	2555	10	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	106.641779504107	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTGCAATTTGTTC	-155688175	True	NA	-3	True	AATAAA	-29	NA	155689000	155659445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155660914_155661306_155661424_155668626_155668778_155670319_155670465_155672559_155672732_155675009_155675097_155676547_155676747_155679408_155679513_155680415_155680457_155688929
transcript_114363.nnic	chr5	+	835	7	NIC	ENSG00000248309.8	novel	853	7	NA	NA	0	9	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	4.12310562561766	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAACTACTGTCTTGAA	88889214	True	NA	NA	False	AATAAA	-22	NA	88889398	89168677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_88889481_88905208_88905271_88965840_88965916_89094958_89095030_89150532_89150596_89150723_89150778_89168249
transcript_114370.nic	chr5	+	847	6	NIC	ENSG00000248309.8	novel	853	7	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	3.13687742827162	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAAATAATGAACTAC	88889290	False	NA	NA	False	AATAAA	-13	NA	88889323	89168668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_88889481_88905208_88905271_88965840_88965916_89094958_89095030_89150532_89150596_89168249
transcript_114388.known	chr5	+	713	4	FSM	ENSG00000248309.8	ENST00000514158.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.24933858267454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGATGGTAATGTGTTC	88889275	False	NA	NA	False	AATAAA	-19	NA	88889459	88941370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_88889481_88905208_88905271_88905701_88905774_88940812
transcript_114393.nnic	chr5	+	927	4	NIC	ENSG00000248309.8	novel	1070	4	NA	NA	-13	-1	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	4.96655480858378	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATCAATACTTTGTAGAG	88889239	True	NA	NA	False	AATAAA	-16	NA	88889423	88944985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_88889481_88905208_88905271_88943015_88943123_88944284
transcript_114394.nnic	chr5	+	1011	4	NIC	ENSG00000248309.8	novel	997	5	NA	NA	-32	5	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	4.64279609239471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGGTTTGAATTATCCA	88889195	False	NA	NA	False	AATAAA	-28	NA	88889228	89032379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_88889481_88905208_88905271_88965840_88965916_89031757
transcript_114401.nnic	chr5	-	996	2	Intergenic	novelGene_49	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGGGAAGGGGATCATC	-90208666	True	NA	NA	False	ATTAAA	-16	NA	90208800	90137701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_-_90138201_90208303
transcript_114410.known	chr5	-	2406	5	FSM	ENSG00000153140.9	ENST00000283122.8	2406	5	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	60.6892700565759	3271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGAGTCTTCTGTGA	-90405792	True	NA	NA	False	AATAAA	-19	NA	90409756	90392256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90394108_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_114411.known	chr5	-	1026	6	FSM	ENSG00000153140.9	ENST00000522083.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	336.119621563514	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTAAATTTGTTTTTAT	-90405793	True	NA	1	True	AATAAA	-27	NA	90409757	90393709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90394108_90396492_90396565_90399357_90399550_90405684_90405800_90407698_90407835_90409644
transcript_114412.known	chr5	-	738	6	FSM	ENSG00000153140.9	ENST00000522864.5	738	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	340.126682281764	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGAGCTTTTATATAAA	-90405768	True	NA	-41	True	NA	NA	NA	90409732	90393858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90394108_90396492_90396565_90399471_90399550_90405684_90405800_90407698_90407835_90409644
transcript_114413.known	chr5	-	664	3	FSM	ENSG00000153140.9	ENST00000522842.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_2	10.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATAAAACTTGAAGGGTG	-90405802	True	NA	NA	False	NA	NA	NA	90409766	90405393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90405800_90407698_90407835_90409644
transcript_114414.known	chr5	+	442	2	FSM	ENSG00000255647.3	ENST00000546238.2	442	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCTCGGTAAATTGAGTG	90409833	True	NA	NA	False	AATAAA	-15	NA	90410032	90410669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90410305_90410499
transcript_114418.known	chr5	+	763	8	FSM	ENSG00000113356.13	ENST00000503373.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	203.971886818367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCTATTAGGCATGAAATT	90474241	False	NA	NA	False	NA	NA	NA	90474260	90512129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90474319_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_114419.known	chr5	+	3251	8	FSM	ENSG00000113356.13	ENST00000504930.5	3251	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	125.775147605169	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTCTGGTTAATGATTA	90460410	True	NA	NA	False	AATAAA	-18	NA	90474888	90514553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90475021_90485534_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_114424.known	chr5	+	3290	8	FSM	ENSG00000113356.13	ENST00000651687.1	3290	8	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_1	73.0375916629126	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGGTTAATGATTATTCA	90460385	True	NA	NA	False	AATAAA	-22	NA	90474863	90514557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90495676_90495734_90497655_90497707_90501905_90501989_90506527_90506675_90512052
transcript_114447.nic	chr5	+	745	4	NIC	ENSG00000113356.13	novel	682	4	NA	NA	-122	-80	combination_of_known_junctions	FALSE	canonical	3	123	junction_3	219.624426894844	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACATTTATATGTGCCTA	90474722	False	NA	12	True	AATAAA	-18	NA	90474741	90490778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90475021_90485534_90485685_90487999_90488130_90490592
transcript_114448.known	chr5	+	682	4	FSM	ENSG00000113356.13	ENST00000514483.5	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_3	209.382159910745	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAGTGAAAAAGAATTGGC	90460416	True	NA	92	True	CATAAA	-20	NA	90474894	90490858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90475021_90485524_90485685_90487999_90488130_90490592
transcript_114454.nnic	chr5	+	659	2	NNC	ENSG00000113356.13	novel	682	4	NA	NA	-10	-2457	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCTGTGTGAATT	90460375	True	NA	NA	False	AATAAA	-17	NA	90474853	90483227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90475021_90482735
transcript_114455.known	chr5	-	4277	2	FSM	ENSG00000176055.10	ENST00000316610.7	4277	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATCTATAATTGATAT	-90474336	True	NA	-33	True	AATAAA	-15	NA	90474771	90458208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90461553_90473838
transcript_114459.known	chr5	+	2906	9	FSM	ENSG00000164199.18	ENST00000640109.1	2906	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	4.16645832812474	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGCTTGATACT	90551788	True	NA	NA	False	TATAAA	-39	NA	90558799	90630510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129_90625244_90627210_90627777_90628561_90628833_90629209
transcript_114462.nnic	chr5	+	1582	8	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-127	0	at_least_one_novel_splicesite	TRUE	canonical	3	29	junction_1	40.348482003664	255	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929112	91164216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_114464.nic	chr5	+	1632	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	42.0160319256294	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90928453	True	NA	14	True	AATAAA	-14	NA	90929147	91164216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_114467.nic	chr5	+	1824	8	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	48.4055992713273	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90928524	True	NA	14	True	AATAAA	-14	NA	90929218	91164216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90929662_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91150029_91150222_91153220_91153399_91163781
transcript_114468.known	chr5	+	1466	7	FSM	ENSG00000164199.18	ENST00000640281.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	3.3870669054836	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACACACACACACACAAGA	90551825	True	NA	NA	False	NA	NA	NA	90558836	90627945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129_90625244_90627210
transcript_114469.nnic	chr5	+	1390	7	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	57.0545547894489	98	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929112	91164216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_114472.nic	chr5	+	1440	7	NIC	ENSG00000164199.18	novel	893	6	NA	NA	-92	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_5	58.1504275325833	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	90928453	True	NA	14	True	AATAAA	-14	NA	90929147	91164216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91153220_91153399_91163781
transcript_114478.known	chr5	+	2221	6	FSM	ENSG00000164199.18	ENST00000638316.1	2221	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	2.85657137141714	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGCATAAATAAAAGGAAAAA	NA	False	NA	NA	False	NA	NA	NA	90558685	90626582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085_90619182_90622596_90622702_90625129
transcript_114480.nnic	chr5	+	1212	6	NNC	ENSG00000164199.18	novel	893	6	NA	NA	-127	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_5	64.338479932308	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTATCATCCAGCTTCA	NA	False	NA	14	True	AATAAA	-14	NA	90929112	91164216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_90929314_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_114482.known	chr5	+	893	6	FSM	ENSG00000164199.18	ENST00000639821.1	893	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	65.4235431629929	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGCTTTTGTGCTAAA	90928545	True	NA	NA	False	NA	NA	NA	90929239	91163939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_90929399_90965414_90965532_90985343_90985523_91072446_91072605_91102218_91102341_91163781
transcript_114489.nic	chr5	+	750	4	ISM	ENSG00000164199.18	ENST00000638316.1	2221	6	43	7271	43	-3360	5prime_fragment	FALSE	canonical	2	14	junction_3	2.62466929133727	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTTTCACATTCTGTA	90551717	True	NA	NA	False	AATAAA	-17	NA	90558728	90619311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_90558918_90614834_90615020_90617803_90617954_90619085
transcript_114490.known	chr5	-	4262	3	FSM	ENSG00000176018.13	ENST00000315948.11	4262	3	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	0.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAGCCAGTGAATTTAAT	-90526467	True	NA	0	True	AATAAA	-23	NA	90529584	90515625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_90519485_90525034_90525301_90529447
transcript_114491.nic	chr5	-	899	2	ISM	ENSG00000176018.13	ENST00000453259.2	553	4	-49	5155	-49	-5155	5prime_fragment	FALSE	canonical	3	264	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGTCACATTTGTAGAT	-90526516	True	NA	NA	False	AAAAAG	-16	NA	90529633	90524587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_90525301_90529447
transcript_114492.nic	chr5	-	528	2	ISM	ENSG00000176018.13	ENST00000453259.2	553	4	-49	5526	-49	-5526	5prime_fragment	FALSE	canonical	3	264	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACCTTGTTTATTCCTT	-90526516	True	NA	NA	False	AATAAA	-13	NA	90529633	90524958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_90525301_90529447
transcript_114493.known	chr5	+	2500	3	FSM	ENSG00000281357.4	ENST00000625713.2	2500	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGGCTGTTCTAGATGC	91380023	True	NA	NA	False	AATAAA	-21	NA	91380348	91420715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_91380925_91418708_91418772_91418854
transcript_114495.known	chr5	+	522	3	FSM	ENSG00000281357.4	ENST00000629389.2	770	3	246	2	70	-2	multi-exon	FALSE	canonical	0	0	junction_2	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTGTAGGTCCTATGAG	91380623	False	NA	NA	False	ATTAAA	-16	NA	91380651	91422963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_91380925_91418708_91418772_91422777
transcript_114497.known	chr5	-	4239	8	FSM	ENSG00000113369.9	ENST00000265138.4	4239	8	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_3	3.614031611621	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGGTAAGAATTGTATC	-91383090	True	NA	94	True	ATTAAA	-29	NA	91383317	91368630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_91371457_91373683_91373839_91374113_91374277_91374921_91375179_91375510_91375614_91376620_91376769_91378693_91378776_91382812
transcript_114498.nic	chr5	-	1721	2	ISM	ENSG00000113369.9	ENST00000507075.1	355	3	-454	1013	-12	-1013	5prime_fragment	FALSE	canonical	3	18	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAAACACCAGTGTTT	-91383102	True	NA	NA	False	NA	NA	NA	91383329	91377571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_91378776_91382812
transcript_1145.known	chr1	-	1645	14	FSM	ENSG00000116151.14	ENST00000378531.8	1645	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	9.60399325231607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGGGCACTGCTCCTTGG	-2391461	False	NA	-1	True	AATAAA	-18	NA	2391554	2321252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2321580_2324096_2324144_2336468_2336549_2336716_2336851_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
transcript_114509.nnic	chr5	+	570	3	NNC	ENSG00000250049.7	novel	576	4	NA	NA	-560	122	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAGAGA	NA	False	NA	NA	False	GATAAA	-43	NA	92198976	92401231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_92199150_92204604_92204685_92400914
transcript_114513.known	chr5	-	2659	6	FSM	ENSG00000237187.9	ENST00000656921.1	2659	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.44093010681705	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTATACAGTCTAGTCC	-93570479	False	NA	NA	False	AATAAA	-7	NA	93570575	93409366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93553760_93553864_93554873_93554996_93563363_93563464_93569889_93570003_93570497
transcript_114517.known	chr5	-	271	2	FSM	ENSG00000237187.9	ENST00000607112.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAGCAGAAATGGAAACAAA	-93422317	True	NA	NA	False	NA	NA	NA	93422413	93411401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93422250
transcript_114518.known	chr5	-	591	2	FSM	ENSG00000237187.9	ENST00000607195.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAATGGAAAAGTATATTC	-93422327	True	NA	-15	True	AATAAA	-4	NA	93422423	93411032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93422309
transcript_114519.known	chr5	-	580	2	FSM	ENSG00000237187.9	ENST00000606165.5	580	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGTGTTTTAAGTCTC	NA	False	NA	0	True	AATAAA	-19	NA	93423242	93411017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93411510_93423154
transcript_11452.known	chr1	+	2422	14	FSM	ENSG00000125459.17	ENST00000245564.8	2422	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	33.9899045227764	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGTTTATTCCACACA	155610162	True	NA	29	True	NA	NA	NA	155610217	155614951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613461_155613567_155613656_155613767_155614058
transcript_11453.known	chr1	+	1649	13	FSM	ENSG00000132676.16	ENST00000343043.7	1649	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	125.78958952685	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678074	True	NA	-12	True	AATAAA	-11	NA	155689082	155738526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689244_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_114532.nic	chr5	-	1121	7	ISM	ENSG00000113391.19	ENST00000395965.8	4684	11	-5	263586	-5	0	5prime_fragment	FALSE	canonical	3	29	junction_5	15.0296004234607	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	-94110957	True	NA	NA	False	ATTAAA	-17	NA	94111668	93881310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_114534.known	chr5	-	4684	11	FSM	ENSG00000113391.19	ENST00000395965.8	4684	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	13.2245982925758	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGTGAGTTTAAGTTGC	-94110952	True	NA	NA	False	AATAAA	-18	NA	94111663	93617724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645_94074770_94111510
transcript_114537.nic	chr5	-	1005	6	ISM	ENSG00000113391.19	ENST00000509163.5	1369	10	0	260382	0	0	5prime_fragment	FALSE	canonical	3	40	junction_5	11.5481600266016	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	-94110965	True	NA	NA	False	ATTAAA	-17	NA	94111676	93881310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
transcript_11454.known	chr1	+	2056	13	FSM	ENSG00000132676.16	ENST00000368336.10	2056	13	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	41.1082581592664	1065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATACTGTACTGTTTTAC	155678082	True	NA	NA	False	AATAAA	-32	NA	155689090	155739010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_114540.known	chr5	-	1369	10	FSM	ENSG00000113391.19	ENST00000509163.5	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	10.7496769977314	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTGTCGAGCGGACTC	-94110965	True	NA	NA	False	NA	NA	NA	94111676	93620928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93621130_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94111510
transcript_114546.known	chr5	-	1392	11	FSM	ENSG00000113391.19	ENST00000502503.1	1392	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.3485449362044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTTACCGAAGCCT	NA	False	NA	NA	False	NA	NA	NA	94111699	93621080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93621130_93737811_93737941_93776158_93776244_93784382_93784500_93824147_93824268_93881469_93881689_93958776_93958969_93964457_93964524_94053125_94053228_94074645_94074770_94111510
transcript_11455.known	chr1	+	1470	12	FSM	ENSG00000132676.16	ENST00000421487.6	1470	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	137.296686650805	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTGTGTTAGATTAA	155678082	True	NA	-12	True	AATAAA	-11	NA	155689090	155738526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_114551.known	chr5	-	965	6	FSM	ENSG00000113391.19	ENST00000506398.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	15.7683226755416	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTACAAAACGCATCATT	NA	False	NA	NA	False	ATTAAA	-17	NA	94074771	93881310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_93881689_93958776_93958969_93964457_93964524_94050730_94050832_94053125_94053228_94074645
transcript_114553.nnic	chr5	-	1215	2	Genic_Genomic	ENSG00000249353.2	novel	830	1	NA	NA	-146	325	multi-exon	FALSE	canonical	0	0	junction_1	0	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAACTTTTTGCCTA	NA	False	NA	-10	True	AATAAA	-28	NA	93683813	93682512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_-_93683060_93683145
transcript_114555.known	chr5	-	2262	5	FSM	ENSG00000185261.15	ENST00000329378.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	4.76969600708473	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-94618285	True	NA	11	True	AATAAA	-26	NA	94618597	94519205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
transcript_114556.nic	chr5	-	2125	4	ISM	ENSG00000185261.15	ENST00000513200.7	4942	20	-40	366240	-7	0	5prime_fragment	FALSE	canonical	0	0	junction_3	3.85861230093008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGAATTTTCAAATTGT	-94618299	True	NA	11	True	AATAAA	-26	NA	94618611	94519205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_94520918_94523929_94524099_94536995_94537128_94618499
transcript_114557.known	chr5	-	7241	21	FSM	ENSG00000185261.15	ENST00000682413.1	7241	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.19879793798528	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTTATATTTTTGTCA	-94618292	True	NA	NA	False	AATAAA	-25	NA	94618604	94150850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_94154125_94384367_94384459_94386241_94386405_94391534_94391695_94396100_94396510_94403568_94403794_94417200_94417366_94439981_94440122_94452958_94453070_94462386_94462570_94464868_94465060_94469960_94470112_94471465_94471732_94473291_94473520_94477110_94477206_94484768_94484931_94520247_94520918_94523929_94524099_94536995_94537128_94582432_94582584_94618499
transcript_114558.known	chr5	+	5583	21	FSM	ENSG00000133302.13	ENST00000265140.10	5583	21	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_7	17.3547543918086	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGCTTTTCCCCATGC	94616242	True	NA	NA	False	AATAAA	-29	NA	94618668	94697621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271_94653422_94654629_94654753_94662297_94662352_94663749_94663909_94665860_94666025_94670150_94670280_94670842_94671009_94678807_94678956_94686572_94686719_94688505_94688670_94689472_94689607_94691563_94691657_94692073_94692257_94694830
transcript_11456.known	chr1	+	729	4	FSM	ENSG00000132676.16	ENST00000465375.5	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_3	24.0970260959038	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGTGGATTTTGTGA	155678085	True	NA	NA	False	AATAGA	-33	NA	155689093	155721989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155717005_155717129_155721516
transcript_114563.nic	chr5	+	1091	8	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-46	44284	-46	-1414	5prime_fragment	FALSE	canonical	3	91	junction_7	18.405855323893	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAGAAAGCAATTGCAA	94618586	False	NA	NA	False	AAGAAA	-1	NA	94618622	94653337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701_94651846_94653271
transcript_114565.nic	chr5	+	950	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-46	45851	-46	-2981	5prime_fragment	FALSE	canonical	3	122	junction_2	11.5385826204473	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGGTTCCAGTAAAGA	94618586	False	NA	-66	True	AAAAAG	-6	NA	94618622	94651770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_114566.nic	chr5	+	1025	7	ISM	ENSG00000133302.13	ENST00000265140.10	5583	21	-46	45776	-46	-2906	5prime_fragment	FALSE	canonical	3	122	junction_2	11.5385826204473	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACAACTTTCCAAATTAAA	94618586	False	NA	9	True	NA	NA	NA	94618622	94651845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_94618766_94628810_94628925_94629091_94629168_94630502_94630744_94643272_94643436_94649453_94649598_94651701
transcript_11457.known	chr1	+	1894	12	FSM	ENSG00000132676.16	ENST00000535183.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	144.88239745017	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAATAAATAAATAAA	155678082	True	NA	NA	False	NA	NA	NA	155689090	155738971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155689175_155709772_155709825_155721516_155721619_155725381_155725491_155725926_155726020_155727607_155727739_155729041_155729123_155729207_155729367_155731355_155731416_155731943_155732034_155736945_155737064_155738156
transcript_114570.known	chr5	-	5677	43	FSM	ENSG00000198677.12	ENST00000358746.7	5677	43	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_30	27.359121732068	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTTTCTTTATAGTGT	-95549375	True	NA	-21	True	AATAAA	-15	NA	95554977	95463893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95464682_95467865_95467990_95469779_95469911_95478289_95478443_95482472_95482632_95484723_95484846_95490907_95491037_95494681_95494794_95494963_95495018_95497415_95497489_95498369_95498592_95502879_95503004_95503813_95503939_95506933_95507012_95509593_95509688_95512476_95512619_95513570_95513646_95514854_95514924_95516352_95516410_95516524_95516587_95516671_95516751_95516915_95517061_95517145_95517323_95520715_95520819_95522053_95522308_95523201_95523327_95523654_95523835_95524464_95524592_95525397_95525502_95525586_95525674_95528012_95528153_95529000_95529103_95530088_95530230_95536816_95536926_95537042_95537142_95540689_95540831_95541304_95541381_95541814_95541907_95543183_95543328_95547060_95547152_95548559_95548716_95550580_95550651_95554935
transcript_114573.known	chr5	+	3365	8	FSM	ENSG00000164291.17	ENST00000380009.9	3365	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	6.5621051873462	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAGAATGGCCTTCTCC	95552358	True	NA	52	True	NA	NA	NA	95555100	95605102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95555405_95565997_95566128_95567889_95568050_95582915_95583199_95586561_95586734_95591400_95591626_95600846_95601072_95603236
transcript_114578.known	chr5	+	1088	2	FSM	ENSG00000164291.17	ENST00000504763.1	1088	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAAAATTTTTGCATTC	95552424	True	NA	NA	False	AATAAA	-35	NA	95555166	95557057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95555405_95556207
transcript_11458.known	chr1	+	2438	14	FSM	ENSG00000125459.17	ENST00000649846.1	2438	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	74.0351747522197	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATTGATTTGCAAAATC	155610162	True	NA	11	True	NA	NA	NA	155610217	155614933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155610333_155610424_155610561_155611038_155611109_155611215_155611292_155611548_155611604_155611688_155611828_155611982_155612101_155612181_155612317_155612417_155612571_155612843_155612976_155613048_155613234_155613424_155613567_155613656_155613767_155614061
transcript_114580.nnic	chr5	+	919	6	NNC	ENSG00000175449.14	novel	2582	6	NA	NA	-38	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	20.9437341465174	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTATGCTTGAAAAC	95646218	True	NA	NA	False	GATAAA	-21	NA	95646715	95656333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_95646818_95652136_95652332_95653091_95653215_95654060_95654237_95654332_95654368_95656045
transcript_114581.known	chr5	+	2582	6	FSM	ENSG00000175449.14	ENST00000380005.9	2582	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	12.3028451993838	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGAAATCTTCTCATC	95646279	True	NA	NA	False	AATAAA	-24	NA	95646776	95658082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95646818_95652136_95652332_95653116_95653215_95654060_95654237_95654332_95654368_95656045
transcript_114585.known	chr5	+	615	5	FSM	ENSG00000175449.14	ENST00000511684.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	6.41774882649672	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACACAGTGACAGTAGAC	95646256	True	NA	NA	False	AATAAA	-9	NA	95646753	95656190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95646818_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_114587.known	chr5	+	2722	5	FSM	ENSG00000175449.14	ENST00000311364.8	2722	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	22.3047080231955	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAGAACTTTGTGAATGT	95646356	False	NA	8	True	AATAAA	-15	NA	95646853	95657140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95648075_95652136_95652332_95654060_95654237_95654332_95654368_95656045
transcript_114592.nnic	chr5	+	580	4	NIC	ENSG00000175449.14	novel	2582	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	27.1334152332916	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTATGCTTGAAAAC	95646239	True	NA	NA	False	GATAAA	-21	NA	95646736	95656333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_95646818_95654060_95654237_95654332_95654368_95656045
transcript_114594.known	chr5	+	464	2	FSM	ENSG00000175449.14	ENST00000513950.2	464	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTGTATGCTTGAAAAC	95653563	False	NA	NA	False	GATAAA	-21	NA	95654060	95656333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_95654237_95656045
transcript_114597.known	chr5	-	1366	3	FSM	ENSG00000173221.14	ENST00000379979.8	1366	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	125	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTCCAATTCATTTG	-95819912	True	NA	-1	True	AATAAA	-24	NA	95822714	95813970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95814958_95816506_95816627_95822455
transcript_114599.known	chr5	-	632	3	FSM	ENSG00000173221.14	ENST00000505427.1	632	3	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	125.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCTAAAATCATTTTGCT	-95819920	True	NA	NA	False	NA	NA	NA	95822722	95814562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95814808_95816506_95816627_95822455
transcript_11460.nic	chr1	-	824	4	ISM	ENSG00000116580.20	ENST00000437809.5	7713	32	26	72730	26	0	5prime_fragment	FALSE	canonical	2	7	junction_3	30.1809358517739	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-155859205	True	NA	NA	False	AAGAAA	-10	NA	155859374	155822446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155822477_155826836_155827029_155853275_155853807_155859303
transcript_114603.known	chr5	-	932	3	FSM	ENSG00000173221.14	ENST00000237858.11	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	3	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACTGAGTACAAATGGCT	-95819924	True	NA	-12	True	AATAAA	-18	NA	95822726	95813848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95814390_95816506_95816627_95822455
transcript_114605.known	chr5	-	5826	12	FSM	ENSG00000118985.16	ENST00000237853.9	5826	12	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_10	15.592963023998	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTACTTGTTTTTCCT	-95958567	True	NA	-7	True	AATAAA	-17	NA	95961851	95885097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_95888988_95889085_95889131_95891102_95891275_95895627_95895692_95898239_95898811_95900692_95900781_95900955_95901081_95906522_95906783_95913770_95913935_95919423_95919546_95943001_95943050_95961574
transcript_114611.known	chr5	-	5136	14	FSM	ENSG00000175426.11	ENST00000311106.8	5136	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	7.20699857099798	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGATCTCCCTCTTTTATT	-96433021	True	NA	NA	False	AAAAAG	-20	NA	96433248	96390332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_96393379_96394863_96395026_96397335_96397470_96398878_96399037_96399952_96400187_96408222_96408324_96410773_96410987_96412317_96412491_96416032_96416122_96421879_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_114614.nic	chr5	-	921	5	ISM	ENSG00000175426.11	ENST00000311106.8	5136	14	-48	31500	-48	1550	5prime_fragment	FALSE	canonical	3	20	junction_4	4.69041575982343	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTGTTTGAGAAAATTA	-96433286	False	NA	0	True	AATAAA	-18	NA	96433296	96421832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_96421957_96423312_96423460_96425819_96425931_96429212_96429318_96432862
transcript_114615.known	chr5	+	4263	31	FSM	ENSG00000153113.24	ENST00000675663.1	4263	31	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.2159303944238	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAGAGGCAAAGAACAAT	96662770	True	NA	NA	False	NA	NA	NA	96663003	96774481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96663167_96675538_96675602_96695835_96695908_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_114617.known	chr5	+	4356	30	FSM	ENSG00000153113.24	ENST00000395813.5	4356	30	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	53.8359025142551	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATCTTGGTTGTGTATTT	96701356	True	NA	NA	False	ATTAAA	-18	NA	96702788	96774679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96726793_96726860_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_114618.known	chr5	+	4282	29	FSM	ENSG00000153113.24	ENST00000309190.9	4282	29	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	33.6349702614674	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTGTGTATTTTTTT	96701368	True	NA	NA	False	ATTAAA	-22	NA	96702800	96774683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779_96730861_96736171_96736241_96737848_96737948_96740037_96740119_96740744_96740784_96741265_96741359_96741493_96741581_96742654_96742757_96746341_96746426_96747344_96747393_96748517_96748614_96750586_96750683_96754059_96754162_96754657_96754742_96757443_96757495_96757582_96757655_96762273_96762373_96765220_96765326_96766052_96766146_96767437_96767483_96767906_96768000_96770530_96770603_96771643_96771703_96772639
transcript_114628.nic	chr5	+	491	6	ISM	ENSG00000153113.24	ENST00000509903.5	2171	27	-38	40830	-13	0	5prime_fragment	FALSE	canonical	3	83	junction_1	45.1530729851247	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGGTGACAAGGTGAGCACA	96702739	False	NA	-5	True	NA	NA	NA	96702767	96730849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96702916_96722638_96722699_96727488_96727531_96729152_96729210_96729611_96729726_96730779
transcript_11463.known	chr1	-	471	4	FSM	ENSG00000116580.20	ENST00000468867.1	471	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.6684210040363	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAAAAGAAAAAGGGT	-155853236	False	NA	NA	False	AAGAAA	-10	NA	155853405	155822446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155822477_155826836_155827029_155832831_155832951_155853275
transcript_114635.nic	chr5	+	1991	2	ISM	ENSG00000113441.16	ENST00000231368.10	12134	18	-58	56538	-58	-17109	5prime_fragment	FALSE	canonical	2	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGCATTTCAATTCTTG	96935541	True	NA	NA	False	AATAAA	-11	NA	96936021	96980975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_96936175_96979137
transcript_114636.known	chr5	+	12134	18	FSM	ENSG00000113441.16	ENST00000231368.10	12134	18	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_10	2.08968466686254	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTGTGGACTCTTTGGA	96935599	True	NA	NA	False	AATAAA	-17	NA	96936079	97037513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_96936175_96979137_96979979_96985079_96985219_96986538_96986671_96993014_96993136_96993816_96993972_96996389_96996504_96998013_96998146_97003414_97003547_97006072_97006234_97006426_97006516_97013647_97013832_97014938_97015096_97022299_97022485_97024520_97024683_97026616_97026758_97027732_97027815_97028401
transcript_114649.known	chr5	-	3909	10	FSM	ENSG00000058729.11	ENST00000283109.8	3909	10	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_7	19.5776390460465	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGGTTTATATTTGTGCTA	-97178570	True	NA	0	True	AATAAA	-17	NA	97183247	97160866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_97163226_97165050_97165148_97167466_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_114656.known	chr5	-	2149	8	FSM	ENSG00000058729.11	ENST00000508447.1	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_5	19.7608146572546	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTGAATTTTCTC	-97178545	True	NA	NA	False	AATAAA	-19	NA	97183222	97166745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_97167992_97168759_97168853_97171205_97171398_97173174_97173264_97177115_97177292_97177731_97177849_97179054_97179194_97183125
transcript_114658.known	chr5	+	720	1	FSM	ENSG00000238000.1	ENST00000442824.1	720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCAGGACTAGAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	98213401	98214121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_98213400_98214100
transcript_11466.known	chr1	+	5182	4	FSM	ENSG00000132718.9	ENST00000368324.5	5182	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5182444579612	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATGTCAGCCTGATTC	155858407	True	NA	11	True	AATAAA	-24	NA	155859566	155885199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_155859796_155867964_155868792_155880499_155880624_155881197
transcript_114661.known	chr5	-	397	2	FSM	ENSG00000246763.7	ENST00000505677.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCGATTTGTGCAATCC	-98773405	True	NA	NA	False	NA	NA	NA	98773469	98770949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_98771185_98773307
transcript_114663.known	chr5	-	8145	36	FSM	ENSG00000153922.11	ENST00000614616.5	8145	36	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_21	33.6047372753744	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATAGCCTGTTTGCTTAT	-98922770	True	NA	NA	False	AATAAA	-16	NA	98929007	98853984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_98856726_98858179_98858391_98858963_98859016_98859971_98860069_98863407_98863587_98868494_98868636_98869753_98869883_98870686_98870804_98872050_98872202_98872416_98872556_98873592_98873724_98875071_98875114_98876397_98876559_98879551_98879729_98881075_98881172_98881278_98881376_98881974_98882124_98883087_98883238_98885577_98885650_98888087_98888241_98889075_98889239_98892524_98892714_98893415_98893607_98894596_98894687_98896225_98896443_98897192_98897321_98898255_98898435_98898663_98898765_98899479_98899706_98900810_98901083_98901185_98901336_98902899_98902965_98903791_98903909_98904896_98905099_98926333_98926535_98928538
transcript_114665.known	chr5	-	488	5	FSM	ENSG00000247877.7	ENST00000504833.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.04633819296811	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGTCTCTCACCAAGAA	-100535075	True	NA	NA	False	AGTAAA	-44	NA	100535262	100450934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_100451098_100457056_100457125_100518529_100518612_100534079_100534153_100535160
transcript_114666.nic	chr5	-	618	4	NIC	ENSG00000247877.7	novel	488	5	NA	NA	-7	196	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTACAGGCCAACAT	-100535082	True	NA	NA	False	GATAAA	-16	NA	100535269	100450738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_100451098_100457056_100457125_100518529_100518612_100535160
transcript_11467.known	chr1	-	2419	7	FSM	ENSG00000143622.11	ENST00000651853.1	2419	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	93.3102650063516	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTGAGTAGTGGTCCCT	-155908033	True	NA	-90	True	GATAAA	-37	NA	155911404	155898836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904602_155904606_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_114670.nnic	chr5	-	520	3	NIC	ENSG00000247877.7	novel	488	5	NA	NA	9	196	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACTACAGGCCAACAT	-100535066	True	NA	NA	False	GATAAA	-16	NA	100535253	100450738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_100451098_100457056_100457125_100535160
transcript_114671.nic	chr5	-	378	3	NIC	ENSG00000247877.7	novel	488	5	NA	NA	-7	24	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGGACTAAATAGTTTCA	-100535082	True	NA	NA	False	AATAAA	-22	NA	100535269	100450910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_100451098_100518529_100518612_100535160
transcript_114673.nic	chr5	+	1404	4	NIC	ENSG00000174132.9	novel	744	3	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	23.5843639350783	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCTTAAAGTGGTCCA	NA	False	NA	-1	True	AATAAA	-11	NA	100535302	100586729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_100535965_100562053_100562189_100581346_100581405_100586180
transcript_114674.known	chr5	+	1287	3	FSM	ENSG00000174132.9	ENST00000312637.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTCCAAATTATGTGTTT	100534911	True	NA	11	True	AATAAA	-23	NA	100535373	100586741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_100535965_100562053_100562189_100586180
transcript_114676.known	chr5	-	1794	3	FSM	ENSG00000113532.13	ENST00000451528.2	1794	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTTTCCTTTTCTCTCT	-100903114	True	NA	NA	False	AATAAA	-21	NA	100903214	100885310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_100886601_100895653_100895786_100902842
transcript_114679.known	chr5	-	5069	13	FSM	ENSG00000173930.9	ENST00000310954.7	5069	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_11	7.09998043815772	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGTGTTTGAGCTTATT	-102295600	True	NA	3	True	ATTAAA	-20	NA	102296284	102233985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_102237019_102239250_102239389_102240717_102240783_102247251_102247443_102249637_102249789_102257114_102257311_102257942_102258088_102260212_102260320_102261911_102262034_102263683_102263781_102270623_102270807_102291342_102291607_102295907
transcript_114684.nnic	chr5	-	740	3	NNC	ENSG00000250682.6	novel	1827	2	NA	NA	25	92400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTAATTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	102671740	102511819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_102511962_102515244_102515329_102671226
transcript_114692.known	chr5	-	944	2	FSM	ENSG00000250682.6	ENST00000510145.1	944	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAAGGAGGCAGAATG	-102671486	False	NA	NA	False	NA	NA	NA	102671559	102609155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_102609767_102671226
transcript_114693.nnic	chr5	-	806	2	NNC	ENSG00000250682.6	novel	1827	2	NA	NA	45	-60470	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTAAAAATCTTTGCCA	NA	False	NA	NA	False	AATAAA	-28	NA	102671720	102670026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_102670339_102671226
transcript_114695.known	chr5	+	3649	25	FSM	ENSG00000145730.21	ENST00000348126.7	3649	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_23	54.3076210888797	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCAGTGTATTTTC	102753877	True	NA	10	True	AATAAA	-15	NA	102755321	103029713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_102755349_102865822_102866285_102867272_102867394_102901355_102901414_102913933_102914022_102924956_102925043_102926584_102926669_102946836_102946886_102948377_102948446_102949536_102949618_102949901_102949979_102950716_102950821_102959874_102960060_102961157_102961230_102990271_102990402_103003032_103003150_103005153_103005227_103006800_103007012_103007456_103007658_103009750_103009867_103017333_103017434_103019789_103019844_103025130_103025335_103028184_103028239_103028886
transcript_11470.known	chr1	-	3390	6	FSM	ENSG00000143622.11	ENST00000368323.8	3390	6	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	4.73286382647969	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGCTTTCCTTTGCTTC	-155907978	True	NA	-1	True	AATACA	-15	NA	155911349	155897807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155910655_155910805_155911242
transcript_114701.known	chr5	-	3549	8	FSM	ENSG00000145723.17	ENST00000399004.7	3549	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.5017005425652	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-103119475	True	NA	-3	True	AATAAA	-19	NA	103120138	103085999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_114706.nnic	chr5	-	1466	7	NIC	ENSG00000145723.17	novel	3549	8	NA	NA	-13	3	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	20.5541290796332	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGACACATTCTTAATGA	-103119488	True	NA	5	True	ATTAAA	-21	NA	103120151	103087809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_103088173_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_114708.known	chr5	-	3325	7	FSM	ENSG00000145723.17	ENST00000512248.5	3325	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	20.8379994774504	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTTTGTGGGACTTTGT	-103119445	True	NA	-3	True	AATAAA	-19	NA	103120108	103085999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103088173_103096540_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103108568_103108715_103120063
transcript_114710.nic	chr5	-	1190	7	ISM	ENSG00000145723.17	ENST00000399004.7	3549	8	-13	10740	-13	5536	5prime_fragment	FALSE	canonical	3	29	junction_1	10.915076220022	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGTCATGAAGTTTTAAG	-103119488	True	NA	NA	False	ATTAAA	-17	NA	103120151	103096739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_103096827_103097313_103097491_103097589_103097782_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_114712.known	chr5	-	1040	5	FSM	ENSG00000145723.17	ENST00000508629.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.8446217637202	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATCTTGACACATTCTTAA	-103119434	True	NA	2	True	ATTAAA	-18	NA	103120097	103087812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103088173_103104540_103104847_103106715_103106910_103108568_103108715_103120063
transcript_114716.nic	chr5	+	1803	11	ISM	ENSG00000145725.20	ENST00000613674.4	4933	33	-228	48438	13	-4380	5prime_fragment	FALSE	canonical	3	104	junction_8	21.7448844558898	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGGAAGTGAGACAT	NA	False	NA	NA	False	AAAACA	-6	NA	103120161	103153909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_103120489_103129305_103129704_103133452_103133649_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847
transcript_114717.known	chr5	+	1516	13	FSM	ENSG00000145725.20	ENST00000507921.5	1516	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	51.3290041464538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTATGTATCCTGGAGGT	103116728	True	NA	NA	False	NA	NA	NA	103120253	103158289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103120489_103136731_103136823_103138383_103138470_103146526_103146682_103147930_103148033_103149151_103149314_103151252_103151375_103152647_103152750_103153847_103153935_103154669_103154746_103154833_103154944_103155908_103155995_103158187
transcript_114719.nic	chr5	+	933	3	ISM	ENSG00000145725.20	ENST00000613674.4	4933	33	-117	68576	11	258	5prime_fragment	FALSE	canonical	3	118	junction_2	27.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAACATTGTGATATATT	103116747	True	NA	NA	False	AATAAA	-28	NA	103120272	103133771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_103120489_103129305_103129704_103133452
transcript_114722.nic	chr5	+	807	2	ISM	ENSG00000145725.20	ENST00000613674.4	4933	33	-138	72472	-2	-3638	5prime_fragment	FALSE	canonical	3	173	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTATGTTGTTTAATGAT	103116726	True	NA	NA	False	AATAAA	-18	NA	103120251	103129875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_103120489_103129305
transcript_114723.known	chr5	+	2988	3	FSM	ENSG00000181751.10	ENST00000319933.7	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	22.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTGTTTTGTTTTTT	103257392	True	NA	13	True	AATAAA	-15	NA	103258762	103278660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103258897_103265907_103265998_103275896
transcript_114725.known	chr5	+	1573	3	FSM	ENSG00000181751.10	ENST00000515669.5	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	58	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGGATACAAAGTATTTA	103258453	True	NA	5	True	AATAAA	-7	NA	103259035	103277228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103259187_103265907_103265998_103275896
transcript_114727.known	chr5	+	2933	3	FSM	ENSG00000181751.10	ENST00000510890.1	2933	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	68.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTGTTGTGTGGTGCTTT	103259394	True	NA	17	True	AATAAA	-17	NA	103259423	103278371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_103259792_103265907_103265998_103275896
transcript_114728.known	chr5	-	3488	7	FSM	ENSG00000112874.10	ENST00000230792.7	3488	7	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	8.4803694888057	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTGTGTGTGTT	-103561485	True	NA	-4	True	ATTAAA	-14	NA	103562789	103548854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560042_103560255_103562702
transcript_114729.known	chr5	-	1781	7	FSM	ENSG00000112874.10	ENST00000507423.1	1781	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	28.318133177642	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAACTGATGATGAAGAAA	-103561485	True	NA	NA	False	CATAAA	-22	NA	103562789	103550507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103550972_103552216_103552417_103554739_103554854_103555930_103556099_103558878_103559469_103560096_103560255_103562702
transcript_114734.known	chr5	-	934	2	FSM	ENSG00000112874.10	ENST00000508889.1	934	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGCATATAGCTAATTT	-103561486	True	NA	NA	False	AATAAA	-40	NA	103562790	103559404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_103560251_103562702
transcript_114735.known	chr5	+	927	4	FSM	ENSG00000251026.2	ENST00000666455.1	927	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATTTTCTGATAGATT	104079804	True	NA	NA	False	AATAAA	-24	NA	104079901	104082573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_104080125_104080907_104081042_104081879_104081948_104082071
transcript_114736.known	chr5	+	1110	3	FSM	ENSG00000251026.2	ENST00000665271.1	1110	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCTGATAGATTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	104079846	104082577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_104080125_104080907_104081042_104081879
transcript_114753.nnic	chr5	-	2089	4	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1654	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	4.96655480858378	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106982478	False	NA	-4	True	ATTAAA	-20	NA	106982523	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106818398_106818478_106980763_106980871_106980970
transcript_114756.nnic	chr5	-	700	4	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1005	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_3	4.96655480858378	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106981829	False	NA	-4	True	ATTAAA	-20	NA	106981874	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106818398_106818478_106980763_106980871_106981710
transcript_114759.nnic	chr5	-	735	4	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1658	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_2	4.18993502999218	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106982482	False	NA	-4	True	ATTAAA	-20	NA	106982527	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106818398_106818478_106980763_106980871_106982328
transcript_11476.known	chr1	-	919	5	FSM	ENSG00000143622.11	ENST00000539040.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	79.4496696028372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTGTCACATTAGAATTTG	-155908031	True	NA	-33	True	NA	NA	NA	155911402	155900182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155900619_155904310_155904503_155904730_155904805_155910449_155910507_155911242
transcript_114760.nnic	chr5	-	610	4	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-2956	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.59966329107444	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	NA	False	NA	-4	True	ATTAAA	-20	NA	106983825	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106818398_106818478_106980763_106980871_106983751
transcript_114779.nnic	chr5	+	1034	3	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_2	8.5	261	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	106978745	False	NA	22	True	AATAAA	-22	NA	106978785	106984050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_106979187_106980711_106980920_106983625
transcript_114782.nnic	chr5	+	913	3	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	0	221	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	106978745	False	NA	22	True	AATAAA	-22	NA	106978785	106984050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_106979187_106980832_106980920_106983625
transcript_114787.nnic	chr5	-	1369	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1013	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	3	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106981837	False	NA	-4	True	ATTAAA	-20	NA	106981882	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106980970
transcript_114789.nnic	chr5	-	621	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1005	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	3	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106981829	False	NA	-4	True	ATTAAA	-20	NA	106981874	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106981710
transcript_114792.nnic	chr5	-	656	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-1658	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	1	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	-106982482	False	NA	-4	True	ATTAAA	-20	NA	106982527	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106982328
transcript_114793.nnic	chr5	-	531	3	NNC	ENSG00000251027.2	novel	620	4	NA	NA	-2956	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGCTTTTGAGATT	NA	False	NA	-4	True	ATTAAA	-20	NA	106983825	106815196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106815547_106980763_106980871_106983751
transcript_114794.known	chr5	-	602	3	FSM	ENSG00000251027.2	ENST00000505997.1	602	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCCCATCTGAATGGCTT	-106980498	True	NA	-12	True	ATTAAA	-12	NA	106980869	106815204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_106815547_106844060_106844215_106980763
transcript_1148.known	chr1	-	1500	11	FSM	ENSG00000116151.14	ENST00000378529.7	1500	11	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	10.9676797910953	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGCCTTCTACTTGGA	-2391614	True	NA	NA	False	CATAAA	-14	NA	2391707	2355174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2355465_2357431_2357599_2358591_2358716_2372480_2372592_2374460_2374558_2384977_2385066_2385806_2385898_2387418_2387530_2388238_2388338_2389924_2389997_2391457
transcript_114803.nnic	chr5	-	1075	3	NNC	ENSG00000251027.2	novel	602	3	NA	NA	-401	-132426	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATTTAGTATATTTAAT	-106981225	False	125	NA	False	AATAAA	-20	NA	106981270	106947631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_106948300_106980763_106980871_106980970
transcript_114806.nnic	chr5	+	826	2	Antisense	novelGene_ENSG00000251027.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	312	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	106978745	False	NA	22	True	AATAAA	-22	NA	106978785	106984050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_106979187_106983625
transcript_114808.known	chr5	-	436	1	FSM	ENSG00000272523.1	ENST00000606054.1	436	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAATCATTGCTCTTTGT	-108727993	True	NA	-8	True	ATTAAA	-19	NA	108728260	108727824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_108727800_108728300
transcript_114811.known	chr5	+	1420	11	FSM	ENSG00000151422.14	ENST00000618353.1	1420	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATGGCGCCAAACTCAG	108924509	True	NA	-84	True	NA	NA	NA	108924605	109187578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_108924790_108946129_108946223_108954728_108954933_108959224_108959348_109037421_109037479_109044679_109044796_109047103_109047199_109100395_109100520_109180746_109180902_109186199_109186323_109187432
transcript_114820.known	chr5	-	4856	10	FSM	ENSG00000198961.10	ENST00000361189.7	4856	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_4	22.0543660468488	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTCTAATATTTAATT	-109404534	True	NA	-16	True	AATAAA	-17	NA	109409974	109334721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_109337357_109344189_109344312_109344704_109344820_109355914_109356027_109362839_109363023_109368560_109368747_109378203_109379255_109381502_109381704_109383402_109383521_109409841
transcript_114823.known	chr5	+	6553	22	FSM	ENSG00000112893.10	ENST00000261483.5	6553	22	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	43.8492056309703	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCCTCTAGAGTAGTT	109687076	True	NA	18	True	AATAAA	-19	NA	109689926	109869625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_109690553_109713519_109713775_109716119_109716265_109729341_109729514_109755328_109755457_109767534_109767709_109770354_109770542_109774787_109774966_109781395_109781599_109784743_109784927_109788933_109789049_109789459_109789528_109817272_109817439_109819668_109819888_109820219_109820343_109823722_109823838_109842327_109842462_109845864_109846007_109847656_109847791_109855139_109855335_109865035_109865147_109866845
transcript_114844.known	chr5	-	546	4	FSM	ENSG00000186952.15	ENST00000503527.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGCTATCCTTG	-110738884	True	NA	NA	False	AATATA	-12	NA	110738918	110666767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_110666867_110667227_110667365_110734902_110735016_110738721
transcript_114847.known	chr5	-	437	3	FSM	ENSG00000186952.15	ENST00000502857.6	437	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAACTGAATGGTTTTG	NA	False	NA	NA	False	AATAAA	-17	NA	110726705	110666645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_110666867_110667227_110667365_110726626
transcript_114848.nnic	chr5	+	1293	9	NNC	ENSG00000164209.17	novel	4745	8	NA	NA	-23	300	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_8	46.874833333037	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATTTGGTGGGTTAAGC	110736065	True	NA	25	True	AATAAA	-22	NA	110738983	110763084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203_110761448_110762849
transcript_114849.known	chr5	+	4745	8	FSM	ENSG00000164209.17	ENST00000355943.8	4745	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	15.4219562537921	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTTTTTCTCCTACT	110736088	True	NA	8	True	AATAAA	-14	NA	110739006	110765157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162_110748264_110755464_110755522_110756701_110756760_110761203
transcript_114855.nic	chr5	+	1779	5	ISM	ENSG00000164209.17	ENST00000447245.6	1575	8	-57	12921	-23	-7688	5prime_fragment	FALSE	canonical	3	150	junction_4	11.7127067751225	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAAATTGAAGCACAGGG	110736065	True	NA	NA	False	AGTAAA	-11	NA	110738983	110749343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_110739403_110742046_110742090_110743729_110743788_110746268_110746347_110748162
transcript_114856.known	chr5	+	6416	23	FSM	ENSG00000134987.13	ENST00000513710.4	6416	23	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_7	27.7236957454291	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTTTTACTTTTGTTA	111085116	True	NA	27	True	AATAAA	-16	NA	111092347	111130502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169_111111279_111113073_111113154_111119012_111119121_111120495_111120594_111120995_111121142_111123804_111123925_111124107_111124190_111125607_111125796_111126733
transcript_11486.known	chr1	-	2961	14	FSM	ENSG00000132680.11	ENST00000368321.8	2961	14	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	29.3743437544725	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTGTGGTTTCTCTGTTT	-155924800	True	NA	-7	True	AATAAA	-14	NA	155934413	155913044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155914321_155915872_155915965_155916624_155916738_155917498_155917673_155921374_155921629_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_114861.known	chr5	+	2126	15	FSM	ENSG00000134987.13	ENST00000505303.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_7	23.5043417613141	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATATGTCATTCTTAA	111085089	True	NA	NA	False	AATGAA	-10	NA	111092320	111111552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293_111107440_111110188_111110304_111110787_111110954_111111169
transcript_114862.nic	chr5	+	1439	12	ISM	ENSG00000134987.13	ENST00000505303.5	2126	15	-7	4143	-7	3549	5prime_fragment	FALSE	canonical	3	225	junction_7	22.9267608622841	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTGAAGAAAGATGACAT	111085082	True	NA	NA	False	NA	NA	NA	111092313	111107409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_111092619_111094919_111094948_111097078_111097180_111098721_111098840_111100588_111100722_111102344_111102400_111103785_111103919_111104176_111104353_111104696_111104818_111105294_111105361_111106056_111106144_111107293
transcript_114863.known	chr5	+	2411	2	FSM	ENSG00000145777.15	ENST00000379706.4	2411	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTAAGCATATAAAGTTG	111073068	True	NA	NA	False	AATAAA	-19	NA	111073313	111078024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_111073646_111075945
transcript_114866.nnic	chr5	-	587	3	NNC	ENSG00000248268.1	novel	565	3	NA	NA	-165	-22367	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCGATACTATGTCATATA	NA	False	NA	NA	False	AATAAA	-20	NA	111302732	111299883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_111300094_111302210_111302347_111302491
transcript_114867.nnic	chr5	-	723	2	NNC	ENSG00000248268.1	novel	565	3	NA	NA	-156	-22367	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCGATACTATGTCATATA	NA	False	NA	NA	False	AATAAA	-20	NA	111302723	111299883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_111300094_111302210
transcript_114871.known	chr5	-	838	4	FSM	ENSG00000164211.13	ENST00000502931.5	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	99.159803684087	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCTGAATAGCTGGGA	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111499584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111500107_111501001_111501117_111506329_111506380_111512384
transcript_114872.known	chr5	-	981	4	FSM	ENSG00000164211.13	ENST00000511569.5	981	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	138.386736679817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACTATAATATGGTAGTC	-111507764	True	NA	NA	False	AGTAAA	-33	NA	111512535	111500463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111512384
transcript_114876.known	chr5	-	709	3	FSM	ENSG00000164211.13	ENST00000511436.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAAGATTAAAAATACTGC	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111500608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111506329_111506380_111512384
transcript_114877.known	chr5	-	803	6	FSM	ENSG00000164211.13	ENST00000505803.5	803	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	93.7174476818484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATACATTCAAACTTGT	-111507791	True	NA	NA	False	NA	NA	NA	111512562	111499881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111500107_111501001_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512390
transcript_114878.known	chr5	-	1467	5	FSM	ENSG00000164211.13	ENST00000502322.5	1467	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	16.5435032565657	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCTATTAATAGTGCTA	-111507819	True	NA	NA	False	TTTAAA	-44	NA	111512590	111500146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111501961_111502089_111506329_111506380_111507328_111507443_111512384
transcript_114879.known	chr5	-	1186	4	FSM	ENSG00000164211.13	ENST00000509887.5	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	118.133634311129	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGTCACTTTGGGATTT	-111507764	True	NA	NA	False	NA	NA	NA	111512535	111500245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111506329_111506380_111507328_111507443_111512384
transcript_114880.known	chr5	-	577	6	FSM	ENSG00000164211.13	ENST00000455172.2	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	144.806629682484	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTATGCTTTTTTTCAGT	-111507741	True	NA	-51	True	TATAAA	-34	NA	111512512	111500987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111501961_111502089_111505014_111505044_111506329_111506380_111507328_111507443_111512384
transcript_114881.known	chr5	-	766	5	FSM	ENSG00000164211.13	ENST00000510346.5	766	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	143.424849660022	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTGTGTTGTATTTTTC	-111507700	True	NA	NA	False	NA	NA	NA	111512471	111500630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111501117_111505014_111505044_111506329_111506380_111507328_111507443_111512384
transcript_114882.known	chr5	-	404	3	FSM	ENSG00000164211.13	ENST00000508215.1	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_2	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	-111507739	True	NA	NA	False	NA	NA	NA	111512510	111506215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111506380_111507328_111507443_111512384
transcript_114883.known	chr5	-	559	5	FSM	ENSG00000134986.14	ENST00000453526.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	615.472328784975	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCATTCTGACTCAAGTGAA	-111757389	False	NA	27	True	NA	NA	NA	111757401	111730746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757174_111757319
transcript_114884.known	chr5	-	704	5	FSM	ENSG00000134986.14	ENST00000419114.6	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	615.472328784975	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCCACGTTTACAACCCTT	-111757543	False	NA	70	True	NA	NA	NA	111757555	111730703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757377
transcript_114885.known	chr5	-	2581	5	FSM	ENSG00000134986.14	ENST00000379671.7	2581	5	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	471.795241603813	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTCATTAAGGCTTA	-111754508	True	NA	NA	False	GATAAA	-15	NA	111757724	111728811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135_111757180_111757561
transcript_11489.known	chr1	-	1135	10	FSM	ENSG00000132680.11	ENST00000482337.5	1135	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	49.5961468037365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACAATACCCGATAACACAA	-155924777	True	NA	NA	False	NA	NA	NA	155934390	155921421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155921528_155921860_155921919_155923626_155923688_155925631_155925844_155926675_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_114897.known	chr5	-	577	3	FSM	ENSG00000134986.14	ENST00000507742.5	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	728	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAACTCAAACTCCCACCG	-111757217	False	NA	NA	False	NA	NA	NA	111757229	111730641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111757135
transcript_114899.known	chr5	-	1942	4	FSM	ENSG00000134986.14	ENST00000257435.12	1942	4	0	0	0	0	multi-exon	FALSE	canonical	3	1259	junction_3	127.439746111207	3236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCTGATTTGGCTCATCA	-111747579	True	NA	-5	True	AATAAA	-20	NA	111757194	111729302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_111731047_111735429_111735508_111755769_111755831_111757135
transcript_114902.known	chr5	+	292	3	FSM	ENSG00000224032.8	ENST00000508590.2	366	3	70	4	62	1	multi-exon	FALSE	canonical	3	28	junction_1	187	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTGTTTTAAGTGA	112150072	True	NA	17	True	AATAAA	-17	NA	112160933	112162311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112160992_112161702_112161776_112162150
transcript_114903.known	chr5	+	2621	3	FSM	ENSG00000224032.8	ENST00000413221.7	2621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	201	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATATGCAGTCTGAAAG	112150010	True	NA	-3	True	AATAAA	-28	NA	112160871	112164257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112161296_112161685_112161776_112162150
transcript_114904.known	chr5	+	578	2	FSM	ENSG00000224032.8	ENST00000442823.3	605	2	27	0	20	0	multi-exon	FALSE	canonical	2	22	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGTGATTAACTGCCAGAA	112150030	True	NA	30	True	AATAAA	-30	NA	112160891	112162324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112161296_112162150
transcript_114908.known	chr5	+	10619	17	FSM	ENSG00000134982.17	ENST00000508376.6	10619	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.8470062217943	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGATATTTGACTCCA	112737158	True	NA	1	True	AATAAA	-15	NA	112737894	112846056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112737926_112738352_112738461_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
transcript_114909.nic	chr5	+	868	5	NIC	ENSG00000134982.17	novel	3602	14	NA	NA	0	8349	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	9.65336728815391	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTATTACGCTCAACT	112705096	True	NA	NA	False	AAGAAA	-9	NA	112707497	112775671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_112707883_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_114910.nic	chr5	+	631	5	NIC	ENSG00000134982.17	novel	524	4	NA	NA	4	8349	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	16.7705098312484	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTATTACGCTCAACT	112705100	True	NA	NA	False	AAGAAA	-9	NA	112707501	112775671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_112707650_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_114912.nic	chr5	+	561	5	ISM	ENSG00000134982.17	ENST00000508624.5	7406	17	-37	67084	-37	8349	5prime_fragment	FALSE	canonical	2	5	junction_1	17.1955662890176	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTATTACGCTCAACT	112737111	True	NA	NA	False	AAGAAA	-9	NA	112737847	112775671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112737926_112754872_112755026_112766325_112766411_112767188_112767391_112775628
transcript_114913.known	chr5	+	524	4	FSM	ENSG00000134982.17	ENST00000509732.5	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	16.779617264871	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGAAGAGGGTTTGTAAA	112705096	True	NA	NA	False	NA	NA	NA	112707497	112767322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112707650_112754872_112755026_112766325_112766411_112767188
transcript_114914.nic	chr5	+	1472	2	ISM	ENSG00000134982.17	ENST00000505350.1	573	3	-23	10424	0	-10424	5prime_fragment	FALSE	canonical	3	23	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCCTTTATAAAAAAA	112705096	True	NA	NA	False	AATATA	-32	NA	112707497	112755959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112707883_112754872
transcript_114915.nic	chr5	+	1235	2	ISM	ENSG00000134982.17	ENST00000509732.5	524	4	4	11363	4	-10424	5prime_fragment	FALSE	canonical	3	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCCTTTATAAAAAAA	112705100	True	NA	NA	False	AATATA	-32	NA	112707501	112755959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112707650_112754872
transcript_114916.nic	chr5	+	1163	2	ISM	ENSG00000134982.17	ENST00000508624.5	7406	17	-37	86798	-37	-10426	5prime_fragment	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTTCCTTTATAAAAA	112737111	True	NA	NA	False	AATATA	-30	NA	112737847	112755957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112737926_112754872
transcript_114917.known	chr5	+	10704	16	FSM	ENSG00000134982.17	ENST00000257430.9	10704	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11.6382511095477	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTCATACTGGTTTCC	112737148	True	NA	2	True	CATAAA	-18	NA	112737884	112846239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112737926_112754872_112755026_112766325_112766411_112767188_112767391_112775628_112775738_112780789_112780904_112792445_112792530_112801278_112801384_112815494_112815594_112818965_112819345_112821895_112821992_112827107_112827248_112827928_112828007_112828855_112828973_112834950_112835166_112837552
transcript_114923.known	chr5	+	937	5	FSM	ENSG00000153037.15	ENST00000282999.7	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	332.835826647313	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAGGAGAGGAGGGATAAT	112853899	True	NA	44	True	AATAAA	-41	NA	112861304	112867935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867371
transcript_114924.known	chr5	+	2776	5	FSM	ENSG00000153037.15	ENST00000505459.6	2776	5	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_3	341.547580872709	3457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGTGAAGGTGCCTGC	112853881	True	NA	NA	False	NA	NA	NA	112861286	112869788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112867403
transcript_114925.known	chr5	+	1850	5	FSM	ENSG00000153037.15	ENST00000391338.3	1850	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	429.877526162976	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAGTTTTGTTCTTAAAAA	112853899	True	NA	NA	False	AATAGA	-34	NA	112861304	112893079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620_112864733_112891602
transcript_114935.known	chr5	+	833	4	FSM	ENSG00000153037.15	ENST00000445150.3	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	919	junction_3	56.3875478767747	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTTGCTTATTGGCATT	112853926	True	NA	NA	False	AATACA	-32	NA	112861331	112865219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456_112864529_112864620
transcript_114942.known	chr5	+	1270	4	FSM	ENSG00000153037.15	ENST00000621420.5	1270	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	720.785374127108	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTTGTTTGTTTGTTTG	112853919	True	NA	NA	False	AGTAAA	-13	NA	112861324	112868392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864620_112864733_112867403
transcript_114943.known	chr5	+	660	4	FSM	ENSG00000153037.15	ENST00000515463.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	721.56881553706	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAAATATTTTTAAATG	112853904	True	NA	NA	False	TATAAA	-33	NA	112861309	112867771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112864456_112864529_112864620_112864733_112867403
transcript_114947.known	chr5	+	631	3	FSM	ENSG00000153037.15	ENST00000515755.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_1	37	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAATGAGACCCACTAAAC	112853920	True	NA	NA	False	NA	NA	NA	112861325	112864919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112861418_112862507_112862584_112864456
transcript_114948.known	chr5	-	3008	5	FSM	ENSG00000129625.13	ENST00000379638.9	3008	5	0	0	0	0	multi-exon	FALSE	canonical	3	777	junction_2	29.0118510267787	2672	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATTTCATTTTATT	-112913865	True	NA	-12	True	AATAAA	-32	NA	112922227	112876384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_112878836_112887014_112887184_112902379_112902519_112921162_112921257_112922072
transcript_11495.known	chr1	-	911	6	FSM	ENSG00000132680.11	ENST00000466713.1	911	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	15.7607106438764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACCCCAGCTACTTGGGA	-155924785	True	NA	NA	False	NA	NA	NA	155934398	155926470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_155926840_155927103_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_114951.nnic	chr5	+	1995	12	NNC	ENSG00000172795.17	novel	4679	12	NA	NA	26	847	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_11	81.9970771500852	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTCTGCTACTGT	112963444	True	NA	38	True	AATAAA	-35	NA	112976735	113020970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320_113013393_113020344
transcript_114954.known	chr5	+	4679	12	FSM	ENSG00000172795.17	ENST00000674880.1	4679	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	107.374297061361	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTATCCTATAGAAAAG	112963521	True	NA	-50	True	TATAAA	-9	NA	112976812	113016649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112981041_112981172_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_114956.known	chr5	+	10110	11	FSM	ENSG00000172795.17	ENST00000389063.3	10110	11	0	0	0	0	multi-exon	FALSE	canonical	2	232	junction_2	31.3502791056156	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATATCAAATAACGCAA	112963506	True	NA	3	True	AATAAA	-20	NA	112976797	113022195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_114964.known	chr5	+	1302	10	FSM	ENSG00000172795.17	ENST00000502635.2	1302	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	120.451106826805	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	112963418	True	NA	NA	False	AAGAAA	-9	NA	112976709	113008005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_112993105_112993174_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_114967.known	chr5	+	8029	10	FSM	ENSG00000172795.17	ENST00000515408.5	8029	10	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_8	88.5029119978476	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGCAAATTATTTTGAG	112963410	True	NA	NA	False	AAAAAG	-25	NA	112976701	113020123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113010755_113010808_113013320
transcript_114971.nic	chr5	+	1412	9	ISM	ENSG00000172795.17	ENST00000389063.3	10110	11	-266	14190	-170	0	5prime_fragment	FALSE	canonical	2	232	junction_2	30.6053508393549	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCTTCAGCCAGCAAAGC	NA	False	NA	NA	False	AAGAAA	-9	NA	112976531	113008005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937
transcript_114972.known	chr5	+	1572	9	FSM	ENSG00000172795.17	ENST00000513585.6	1572	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	99.443451267542	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGTATATTGGAGTTT	112963418	True	NA	-56	True	NA	NA	NA	112976709	113013849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112992671_112992771_113001083_113001237_113001356_113001470_113001566_113001675_113003941_113004078_113007937_113008043_113010755_113010808_113013320
transcript_114977.nic	chr5	+	765	5	ISM	ENSG00000172795.17	ENST00000515408.5	8029	10	35	18904	27	-6770	5prime_fragment	FALSE	canonical	2	232	junction_2	31.8933770554327	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGAAGAGAAATTCGGGTA	112963445	True	NA	NA	False	NA	NA	NA	112976736	113001219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_112976987_112985834_112985987_112992120_112992249_112992671_112992771_113001083
transcript_11498.nic	chr1	-	1339	5	NIC	ENSG00000132680.11	novel	911	6	NA	NA	-13	136	intron_retention	FALSE	canonical	3	181	junction_4	5.40832691319598	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTGCCAAGTAA	-155924813	True	NA	NA	False	NA	NA	NA	155934426	155926334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_155927157_155929295_155929376_155929711_155929841_155933632_155933850_155934335
transcript_114982.nnic	chr5	+	1093	3	NIC	ENSG00000172795.17	novel	852	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	3.5	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	112963410	True	NA	6	True	ATTAAA	-14	NA	112976701	112984651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_112976987_112981041_112981172_112983973
transcript_114987.known	chr5	+	852	2	FSM	ENSG00000172795.17	ENST00000504961.1	852	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	1098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTGTTGCAGTGTTGT	112963521	True	NA	6	True	ATTAAA	-14	NA	112976812	112984651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112983973
transcript_114988.known	chr5	+	369	2	FSM	ENSG00000172795.17	ENST00000510046.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTCTTGTTAGCAAT	112963502	True	NA	NA	False	NA	NA	NA	112976793	112986010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_112976987_112985834
transcript_114989.known	chr5	+	6305	30	FSM	ENSG00000047188.16	ENST00000161863.9	6305	30	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_13	14.1370058570287	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTCAGATCTTATTTCT	113511023	True	NA	15	True	ATTAAA	-16	NA	113513693	113595284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_113514083_113515271_113515363_113524980_113525178_113526585_113526786_113532878_113533046_113534304_113534408_113535641_113535799_113539073_113539182_113540967_113541117_113542367_113542504_113548540_113548668_113548954_113549021_113553180_113553360_113553589_113553687_113553766_113553855_113553941_113554023_113556051_113556135_113561079_113561186_113563372_113563493_113563858_113564132_113565892_113566020_113567091_113567298_113567653_113567850_113579585_113579696_113581416_113581710_113584301_113584480_113591040_113591245_113591995_113592179_113593302_113593391_113593481
transcript_114991.known	chr5	+	1457	6	FSM	ENSG00000080709.16	ENST00000503706.5	1457	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.2453097364562	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTTTGGTCACTTGACAT	114433471	False	NA	10	True	AATAAA	-22	NA	114433529	114496500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_114433930_114463048_114463191_114473053_114473165_114487049_114487178_114493402_114493473_114495894
transcript_114992.known	chr5	-	4156	10	FSM	ENSG00000152503.10	ENST00000513154.6	4156	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	10.9149348357714	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAGAATTCATGTGTA	-115168256	True	NA	-27	True	AATAAA	-37	NA	115169908	115124771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115126858_115130591_115130890_115133859_115134148_115136999_115137125_115137362_115137617_115141278_115141375_115144597_115144745_115147068_115147395_115163517_115163753_115169607
transcript_114997.known	chr5	-	693	2	FSM	ENSG00000152503.10	ENST00000379618.6	693	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTCTCGCTACAGCT	NA	False	NA	3	True	AATAAA	-26	NA	115180546	115171101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115171223_115179974
transcript_114998.known	chr5	-	1322	2	FSM	ENSG00000152503.10	ENST00000379617.2	1322	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCAAATTAAATTAGCA	NA	False	NA	NA	False	NA	NA	NA	115180546	115177122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115177873_115179974
transcript_114999.nnic	chr5	-	2591	10	NNC	ENSG00000164219.10	novel	9550	9	NA	NA	0	1555	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	87.1526261618867	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCTTAATAACAGATGT	-115258533	True	NA	-16	True	AATAAA	-28	NA	115262865	115210846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_115212308_115212419_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_115004.known	chr5	-	9550	9	FSM	ENSG00000164219.10	ENST00000419445.6	9550	9	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	28.4316614885588	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTCAAATGGATTTC	-115258545	True	NA	-9	True	AATAAA	-22	NA	115262877	115204011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115212584_115216864_115216974_115221823_115222009_115230975_115231022_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_11501.nic	chr1	-	646	2	ISM	ENSG00000132680.11	ENST00000491599.1	773	3	-26	1022	-13	-1022	5prime_fragment	FALSE	canonical	3	181	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTGTTTGTAATCCTGT	-155924813	True	NA	NA	False	NA	NA	NA	155934426	155933294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_155933850_155934335
transcript_115011.known	chr5	-	903	7	FSM	ENSG00000164219.10	ENST00000379615.3	903	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	121.371331046504	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTTAGATTGGGAGGG	-115258519	True	NA	NA	False	NA	NA	NA	115262851	115212401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115212584_115216864_115216974_115236389_115236523_115237857_115238010_115241538_115241607_115253136_115253256_115262711
transcript_115012.known	chr5	+	944	1	FSM	ENSG00000271797.1	ENST00000606615.1	944	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGACTGCTTGCGTCATT	NA	False	NA	NA	False	NA	NA	NA	115262504	115263448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_115262500_115263400
transcript_115013.known	chr5	-	2387	10	FSM	ENSG00000164221.13	ENST00000379611.10	2387	10	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	18.7978196791904	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTGGCTAATGCAGTT	-115295058	True	NA	-11	True	TATAAA	-19	NA	115296654	115267189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115267919_115268881_115269001_115269702_115269799_115271212_115271627_115275215_115275607_115275993_115276070_115276964_115277055_115279646_115279769_115284786_115284909_115296426
transcript_115018.known	chr5	-	5697	3	FSM	ENSG00000145780.8	ENST00000274457.5	5697	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	9	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGTGTATTCTTATTAA	-115542300	True	NA	-3	True	AATAAA	-18	NA	115544775	115520907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115525618_115542949_115543684_115544522
transcript_115024.known	chr5	-	752	6	FSM	ENSG00000129596.5	ENST00000502631.1	752	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.5604175650256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTACTGCAGAAGAAAAG	-115814758	True	NA	NA	False	NA	NA	NA	115816657	115805263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115805463_115806348_115806519_115809621_115809698_115811160_115811316_115813180_115813259_115816583
transcript_115028.known	chr5	-	1565	5	FSM	ENSG00000129596.5	ENST00000250535.5	1565	5	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	20.2530861845794	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-115816635	False	NA	0	True	AATAAA	-17	NA	115816659	115804732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816227
transcript_115029.nic	chr5	-	1537	5	NIC	ENSG00000129596.5	novel	1565	5	NA	NA	-328	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	53.3385414123783	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGTGTCTTTCTGAT	-115816963	False	NA	0	True	AATAAA	-17	NA	115816987	115804732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_115805463_115806348_115806519_115811160_115811316_115813180_115813259_115816583
transcript_115031.known	chr5	+	1180	7	FSM	ENSG00000177879.17	ENST00000395548.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	505.119045374454	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGCAATAATTTTTTTTA	115836105	True	NA	40	True	NA	NA	NA	115841996	115914011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_115842107_115852978_115853015_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_115032.known	chr5	+	1276	6	FSM	ENSG00000177879.17	ENST00000316788.12	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	114.305555420548	1445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGATGTTAATGTCGATTT	115836043	True	NA	4	True	AATAAA	-22	NA	115841934	115914081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_115842107_115866669_115866762_115870016_115870129_115895086_115895159_115902884_115902993_115913361
transcript_115040.known	chr5	-	732	6	FSM	ENSG00000145782.13	ENST00000513167.1	732	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	328.633899651268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTTAACAGATGTGATC	-115841521	False	NA	-84	True	NA	NA	NA	115841544	115831719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115840817_115840935_115841389
transcript_115052.known	chr5	-	1082	5	FSM	ENSG00000145782.13	ENST00000379594.7	1082	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	335.766566977714	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGCCTCCAAGGTTGA	-115841326	True	NA	30	True	NA	NA	NA	115841837	115831545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840496_115840613_115841389
transcript_115054.known	chr5	-	773	5	FSM	ENSG00000145782.13	ENST00000505993.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	330.515128246802	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACCCATTGCTCCTACT	-115836324	True	NA	-8	True	CATAAA	-15	NA	115841565	115831583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115840817_115840935_115841389
transcript_115069.known	chr5	-	1430	3	FSM	ENSG00000145782.13	ENST00000500945.2	1430	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	333.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAGGCTGCAGAGGCAA	-115836324	True	NA	NA	False	AATAAA	-14	NA	115841565	115830672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115841389
transcript_115073.known	chr5	-	4040	4	FSM	ENSG00000145782.13	ENST00000509910.2	4040	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	47.7237420531496	1157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCCCTGTTCTTGGAG	-115836324	True	NA	-18	True	AATAAA	-17	NA	115841565	115828199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_115831864_115832601_115832665_115837627_115837765_115841389
transcript_115074.known	chr5	-	373	1	FSM	ENSG00000185641.6	ENST00000469891.2	373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATGAATAGGTCCAACCA	NA	False	NA	NA	False	NA	NA	NA	116052289	116051916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_116051900_116052300
transcript_115082.known	chr5	+	869	7	FSM	ENSG00000145781.9	ENST00000515539.5	869	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	377.436712870148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACTGAGGTTCTAATATAC	116085455	False	NA	NA	False	AATAGA	-15	NA	116085473	116292657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116085607_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_115086.known	chr5	+	1433	7	FSM	ENSG00000145781.9	ENST00000632434.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_3	79.4804308549525	3303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGAAGTGTACATTT	116077988	True	NA	21	True	AATAAA	-17	NA	116085025	116293286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116085094_116087496_116087588_116091078_116091190_116092544_116092701_116134067_116134179_116291516_116291577_116292450
transcript_115087.known	chr5	-	1610	1	FSM	ENSG00000271918.1	ENST00000606662.1	1610	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	42	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCAGTGGGAGTTGGAT	-116085226	True	NA	NA	False	ATTAAA	-39	NA	116085416	116083806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_116083800_116085400
transcript_115089.known	chr5	-	6828	19	FSM	ENSG00000092421.17	ENST00000343348.11	6828	19	0	0	0	0	multi-exon	FALSE	canonical	3	1092	junction_9	81.4226892271906	284	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGTCCTGAATGCT	-116542114	True	NA	-2	True	AATAAA	-20	NA	116574823	116443554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_116447812_116467582_116467748_116473072_116473094_116475544_116475604_116477845_116477927_116478013_116478155_116478541_116478719_116480121_116480278_116482443_116482576_116486748_116486967_116488107_116488197_116488887_116489008_116491739_116491831_116495412_116495515_116496250_116496314_116497326_116497388_116502209_116502328_116504844_116504983_116574184
transcript_115093.known	chr5	+	482	2	FSM	ENSG00000249167.2	ENST00000508766.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAAATTTTTCAAAAAG	116574471	False	NA	NA	False	NA	NA	NA	116574481	116591398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116574540_116590974
transcript_115095.known	chr5	+	1510	2	FSM	ENSG00000249167.2	ENST00000660166.1	1510	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACAGAACTCAGGGGTGT	116574849	False	NA	NA	False	AATAAA	-8	NA	116575154	116591458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116576181_116590974
transcript_115097.known	chr5	+	408	1	FSM	ENSG00000197575.6	ENST00000461663.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTCTGCAATGCTGTA	NA	False	NA	NA	False	TATAAA	-22	NA	116716242	116716650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_116716200_116716600
transcript_115106.known	chr5	+	617	3	FSM	ENSG00000248663.7	ENST00000504107.2	931	3	314	0	314	0	multi-exon	FALSE	canonical	3	54	junction_2	1.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGCATACATTTACTG	117454595	False	NA	NA	False	AATAAA	-17	NA	117455262	117479368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_117455455_117471901_117471939_117478980
transcript_115111.nnic	chr5	+	666	2	NIC	ENSG00000248663.7	novel	931	3	NA	NA	0	-228	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGTTGTTTTAGACAA	117454281	True	NA	NA	False	AATAAA	-22	NA	117454948	117479140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_117455455_117478980
transcript_115112.nnic	chr5	+	894	2	NIC	ENSG00000248663.7	novel	931	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAGCATACATTTACTG	117454281	True	NA	NA	False	AATAAA	-17	NA	117454948	117479368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_117455455_117478980
transcript_115116.known	chr5	-	5776	6	FSM	ENSG00000169570.10	ENST00000510708.6	5776	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	13.0384048104053	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGCCTCAGGATTATTT	-118987320	True	NA	0	True	ATTAAA	-25	NA	118988547	118836073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_118841088_118848089_118848219_118928536_118928730_118939195_118939291_118944558_118944650_118988293
transcript_115119.nnic	chr5	+	1141	3	Genic_Genomic	ENSG00000283498.1_ENSG00000197744.5	novel	327	1	NA	NA	-234	149	multi-exon	FALSE	non_canonical	0	0	junction_1	0	725	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTTTATTTAAGAATGT	NA	False	NA	5	True	AATAAA	-42	NA	118973561	118974819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_118973608_118973661_118973871_118973933
transcript_115122.known	chr5	+	327	1	FSM	ENSG00000197744.5	ENST00000397627.3	327	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	174	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGACAGCAAAAAAGGAAAA	NA	False	NA	NA	False	NA	NA	NA	118973795	118974122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_118973800_118974100
transcript_115123.known	chr5	+	1835	13	FSM	ENSG00000172869.15	ENST00000503802.5	1835	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	21.4610435181724	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTTTTACGCCTAA	119071165	False	NA	5	True	AATAAA	-19	NA	119071204	119133691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493
transcript_115126.known	chr5	+	11538	44	FSM	ENSG00000172869.15	ENST00000539542.6	11538	44	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_33	23.1328844013174	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGGGGTATACTATTGT	119068959	True	NA	10	True	AATAAA	-19	NA	119071086	119249127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210_119129424_119133131_119133386_119133493_119134179_119134267_119134390_119143840_119143931_119144535_119144639_119146836_119146957_119147248_119147471_119148738_119150422_119151928_119152037_119164506_119164677_119165182_119165281_119166615_119166782_119167602_119167865_119170189_119171281_119171777_119171970_119175260_119175338_119177356_119177485_119177995_119178245_119189707_119189887_119193827_119193971_119196370_119196457_119197754_119197957_119203318_119203437_119206833_119206897_119216900_119216988_119220471_119220594_119220939_119221082_119224708_119224770_119233339_119233468_119237321_119237415_119238988_119239081_119240418_119240472_119244358_119244577_119246994
transcript_115128.nic	chr5	+	1433	11	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-141	4359	-23	0	5prime_fragment	FALSE	canonical	3	35	junction_1	22.8245481882994	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTACAGCAACTTAGAAA	119071005	True	NA	20	True	AATAAA	-31	NA	119071063	119129332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934_119102007_119105179_119105259_119110150_119110284_119114474_119114542_119116157_119116337_119118814_119119005_119120970_119121140_119129210
transcript_115135.nic	chr5	+	490	4	ISM	ENSG00000172869.15	ENST00000503802.5	1835	13	-141	31689	-23	-208	5prime_fragment	FALSE	canonical	3	35	junction_1	28.9865869364129	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCAGTAATTTATGAT	119071005	True	NA	NA	False	AAGAAA	-3	NA	119071063	119102002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_119071258_119071554_119071657_119097978_119098105_119101934
transcript_11514.known	chr1	-	895	6	FSM	ENSG00000163479.14	ENST00000480567.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	721.592849188516	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGAGCCTCCTTGGTTCCA	-155997658	True	NA	NA	False	NA	NA	NA	156020889	156009359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018269_156018369_156020012_156020168_156020726
transcript_115140.known	chr5	+	795	2	FSM	ENSG00000145779.8	ENST00000274456.6	795	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTGACTGATCATGATT	119267157	True	NA	NA	False	NA	NA	NA	119268691	119393394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119268908_119392815
transcript_115144.known	chr5	+	711	2	FSM	ENSG00000145779.8	ENST00000504642.1	711	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAAAAGAAGAATTTTCT	119355272	True	NA	NA	False	NA	NA	NA	119355312	119393446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119355393_119392815
transcript_115145.known	chr5	+	6976	2	FSM	ENSG00000145779.8	ENST00000504771.3	6976	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATTCATGCTGGTT	119355989	True	NA	10	True	ATTAAA	-20	NA	119356018	119399688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119356122_119392815
transcript_115148.known	chr5	+	2909	26	FSM	ENSG00000133835.18	ENST00000682445.1	2909	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	362.10523111383	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAAGTCTTTGTGCTCC	119436128	True	NA	126	True	TTTAAA	-5	NA	119452513	119542446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119472457_119472577_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115149.known	chr5	+	2589	25	FSM	ENSG00000133835.18	ENST00000645832.1	2589	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	306.072431514721	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGTGATAGCATTGATA	119436152	True	NA	26	True	AATAAA	-29	NA	119452537	119542269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115152.known	chr5	+	2881	25	FSM	ENSG00000133835.18	ENST00000414835.7	2881	25	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	344.648369013824	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452822_119456314_119456369_119471635_119471701_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115155.known	chr5	+	2628	24	FSM	ENSG00000133835.18	ENST00000510025.7	2628	24	0	0	0	0	multi-exon	FALSE	canonical	3	970	junction_8	87.7288096657456	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119436111	True	NA	12	True	AATAAA	-17	NA	119452496	119542332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115158.known	chr5	+	2551	24	FSM	ENSG00000133835.18	ENST00000643250.1	2551	24	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_7	294.011656983773	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119452717	False	NA	12	True	AATAAA	-17	NA	119452752	119542332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452822_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477493_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115160.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000684214.1	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_21	234.084735134824	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTTTGATACCTTTGTTT	119436090	True	NA	-4	True	AATAAA	-1	NA	119452475	119542316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119536422_119536551_119541904
transcript_115162.known	chr5	+	2494	23	FSM	ENSG00000133835.18	ENST00000515320.5	2494	23	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	242.993623016009	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCCTGTTTCCTTAGAAT	119436111	True	NA	9	True	AATAAA	-12	NA	119452496	119542252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115182.known	chr5	+	844	5	FSM	ENSG00000133835.18	ENST00000509606.1	844	5	0	0	0	0	multi-exon	FALSE	canonical	3	1099	junction_1	71.1139051100416	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTGTGATTTTCTGT	119527127	True	NA	12	True	AATAAA	-17	NA	119527157	119542332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119541904
transcript_115183.known	chr5	+	2780	24	FSM	ENSG00000133835.18	ENST00000646058.1	2780	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	235.53466507057	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCAGTCTTACTTCTGA	119436123	True	NA	NA	False	AATAAA	-3	NA	119452508	119585006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_119452634_119456314_119456369_119473907_119474016_119474400_119474461_119475705_119475728_119475823_119475871_119477416_119477502_119478833_119479022_119489191_119489284_119492099_119492125_119493817_119493947_119496542_119496647_119499316_119499554_119502040_119502093_119506817_119506890_119509140_119509245_119514980_119515047_119525215_119525286_119525916_119526024_119527132_119527220_119529893_119529981_119531265_119531405_119536422_119536551_119584414
transcript_115194.nnic	chr5	+	1707	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	-80769	391	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTTGCTTATTTGATTT	120700435	False	NA	NA	False	AATAAA	-19	NA	120700448	120791169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_120700940_120789953
transcript_115195.nnic	chr5	+	2071	2	NNC	ENSG00000248927.1	novel	1114	2	NA	NA	-80769	755	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAAGTGTTCTCATTATT	120700435	False	NA	NA	False	ATTAAA	-16	NA	120700448	120791533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_120700940_120789953
transcript_115198.known	chr5	+	2855	8	FSM	ENSG00000151304.6	ENST00000339397.5	2855	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	11.183077594732	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGGAATTCAAGGGATTA	121958432	True	NA	NA	False	GATAAA	-6	NA	121961974	122028633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087_122020803_122022369_122022408_122026941
transcript_115207.nic	chr5	+	889	6	ISM	ENSG00000151304.6	ENST00000339397.5	2855	8	-120	8187	-120	-8187	5prime_fragment	FALSE	canonical	3	95	junction_5	11.443775600736	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATCTGATAGCTCACTCTC	121958312	True	NA	-35	True	AAAACA	-3	NA	121961854	122020446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_121962069_121974195_121974285_121975314_121975388_121994598_121994671_122019259_122019342_122020087
transcript_115213.known	chr5	+	2564	10	FSM	ENSG00000064692.20	ENST00000512385.5	2564	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	17.8892339511234	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTAACAAATCTGTGA	122312102	False	NA	29	True	AATAAA	-37	NA	122312124	122464075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122452924_122452996_122463490
transcript_115214.known	chr5	+	2410	9	FSM	ENSG00000064692.20	ENST00000508017.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	17.900768139943	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAAGTATTTTGATTGCT	122312122	False	NA	70	True	NA	NA	NA	122312248	122464116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122312285_122391088_122391192_122403792_122403866_122431968_122432083_122440628_122440755_122444562_122444733_122449844_122449938_122450532_122451602_122463490
transcript_115226.nnic	chr5	-	984	4	NNC	ENSG00000250328.6	novel	1424	6	NA	NA	-144907	-19970	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27.3414622058798	409	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGACTGCCTGTTTTAG	NA	False	NA	NA	False	AATAAA	-30	NA	122623994	122474217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_122474651_122478585_122478816_122622055_122622157_122623774
transcript_115228.nnic	chr5	-	778	3	NNC	ENSG00000250328.6	novel	1424	6	NA	NA	54	-19969	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4	590	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTGCCTGTTTTAGT	-122478764	True	NA	NA	False	AATAAA	-31	NA	122478827	122474216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_122474651_122476787_122476890_122478585
transcript_115235.known	chr5	+	1050	8	FSM	ENSG00000064652.11	ENST00000395451.8	1050	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	31.4863105984496	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACTCTTCTCACCGTGA	122843949	True	NA	NA	False	NA	NA	NA	122845604	123008161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122891026_122891126_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_115237.known	chr5	+	608	8	FSM	ENSG00000064652.11	ENST00000511545.5	608	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.2000737643636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGAAGTCACAGTCAAGG	122844007	False	NA	NA	False	NA	NA	NA	122845662	123007782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122853673_122853768_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_115240.known	chr5	+	1987	7	FSM	ENSG00000064652.11	ENST00000261369.9	1987	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	14.2643689738531	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGAGTTTGTCTTCTCC	122843957	True	NA	14	True	AATAAA	-16	NA	122845612	123009205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002005_123007681
transcript_115243.known	chr5	+	1563	7	FSM	ENSG00000064652.11	ENST00000513881.5	1563	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	31.3882497476719	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGCCCCGCTAGTGGCA	122845392	False	NA	NA	False	AAAAAG	-36	NA	122845517	123008610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939_123002081_123007681
transcript_115248.known	chr5	+	588	6	FSM	ENSG00000064652.11	ENST00000506996.5	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	13.7462722219517	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCGACACTTAGAATTTT	122843970	False	NA	3	True	AATAAA	-16	NA	122845625	123002142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_122845694_122936733_122936818_122946054_122946160_122999911_123000007_123001404_123001438_123001939
transcript_115252.known	chr5	+	4635	13	FSM	ENSG00000151292.17	ENST00000345990.8	4635	13	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_12	65.455402544192	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAATTAAGGGAAATAGCA	123508388	True	NA	NA	False	ATTAAA	-12	NA	123512098	123617040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_123512571_123545416_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_115253.known	chr5	+	2580	12	FSM	ENSG00000151292.17	ENST00000521364.5	2580	12	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_11	67.8957635699298	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTCTCTTGTATTCAA	NA	False	NA	32	True	AATAAA	-29	NA	123545414	123615455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_123545842_123553106_123553148_123557494_123557565_123573392_123573542_123575728_123575964_123588067_123588154_123588426_123588512_123590412_123590559_123591318_123591415_123604723_123604831_123605338_123605363_123614341
transcript_115259.known	chr5	-	650	4	FSM	ENSG00000253807.6	ENST00000628324.2	650	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGATTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	124395039	124059793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_124059949_124062417_124062511_124386228_124386274_124394682
transcript_115261.nnic	chr5	+	422	2	FSM	ENSG00000289458.1	ENST00000685834.1	356	2	-71	5	-71	-5	multi-exon	FALSE	canonical	3	311	junction_1	0	802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTCCATGTAATTTTG	NA	False	NA	16	True	AATAAA	-30	NA	124497249	124505105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_124497592_124505025
transcript_115271.known	chr5	-	406	1	FSM	ENSG00000242814.2	ENST00000464124.2	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCCTGCCCCCAAAGCA	NA	False	NA	NA	False	NA	NA	NA	124809233	124808827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_124808800_124809200
transcript_115272.known	chr5	+	1847	15	FSM	ENSG00000155324.10	ENST00000513978.5	1847	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	27.0004724070539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTCTTAACGACTTTCAA	126422264	True	NA	NA	False	NA	NA	NA	126423471	126493326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_115273.known	chr5	+	3109	14	FSM	ENSG00000155324.10	ENST00000515200.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	32.7144721245893	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACAATGCTTCATT	126423125	False	NA	NA	False	AAAAAG	-7	NA	126423145	126494371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126423690_126465425_126465546_126466293_126466337_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484398_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_115275.known	chr5	+	2905	14	FSM	ENSG00000155324.10	ENST00000285689.8	2905	14	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	10.8376944643118	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAGACAATG	126422201	True	NA	NA	False	AAGAAA	-26	NA	126423408	126494364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126423690_126465425_126465546_126469676_126469789_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_115277.known	chr5	+	1532	13	FSM	ENSG00000155324.10	ENST00000514099.5	1532	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	20.5480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGATTTTGCTGCTTTTGCC	126422264	True	NA	NA	False	AATAAA	-23	NA	126423471	126493166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126423690_126465425_126465546_126472237_126472305_126473264_126473369_126477691_126477788_126480455_126480528_126480626_126480708_126483462_126483575_126484401_126484525_126485685_126485774_126486872_126486978_126488798_126488893_126492914
transcript_115281.known	chr5	-	2747	19	FSM	ENSG00000164904.18	ENST00000636872.1	2747	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	217.305589287994	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCTGTCTACAAAAAAA	-126582391	True	NA	NA	False	NA	NA	NA	126595198	126543997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593405_126594107_126594268_126595006
transcript_115283.known	chr5	-	2639	18	FSM	ENSG00000164904.18	ENST00000636808.1	2639	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	173.333249046204	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCGTCTTTACCAAAAAA	-126595349	False	NA	NA	False	NA	NA	NA	126595362	126544152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
transcript_115284.known	chr5	-	2332	16	FSM	ENSG00000164904.18	ENST00000636743.1	2332	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	184.273299446471	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCGTCTTTACCAAAAA	-126582412	True	NA	NA	False	NA	NA	NA	126595219	126544153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126595006
transcript_115285.known	chr5	-	2321	15	FSM	ENSG00000164904.18	ENST00000636886.1	2321	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	190.739698681374	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGGGAGGCTGAGGC	-126582418	True	NA	NA	False	AATACA	-40	NA	126595225	126544089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126545020_126546323_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126595006
transcript_115297.known	chr5	-	1738	18	FSM	ENSG00000164904.18	ENST00000636225.1	1738	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	255.541612210094	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGAGAAGGTCTACTT	-126582407	True	NA	NA	False	NA	NA	NA	126595214	126546344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126546400_126549928_126550003_126550195_126550294_126552020_126552138_126554286_126554394_126555930_126556016_126559239_126559335_126561082_126561125_126564457_126564593_126568258_126568357_126570781_126570860_126575419_126575465_126577078_126577212_126582850_126582975_126583931_126584013_126592663_126592730_126593350_126593448_126595006
transcript_115308.known	chr5	+	3609	5	FSM	ENSG00000164902.14	ENST00000297540.5	3609	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	52.5327278941423	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTTCAAGTGATTATAT	126593969	True	NA	45	True	AATAAA	-24	NA	126600946	126627252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126601059_126603569_126604184_126608363_126608485_126617249_126617334_126624574
transcript_115316.known	chr5	+	625	2	FSM	ENSG00000164902.14	ENST00000514725.1	625	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAAACGACCTGTCAA	126593947	True	NA	NA	False	NA	NA	NA	126600924	126604064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126601059_126603573
transcript_115317.known	chr5	+	828	3	FSM	ENSG00000164902.14	ENST00000505674.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_2	46	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATAATGTCCTCACC	126603450	False	NA	NA	False	AAAACA	-30	NA	126603560	126617333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126604184_126608363_126608485_126617249
transcript_115318.known	chr5	+	847	3	FSM	ENSG00000164902.14	ENST00000511371.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_2	18.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCATAATGGGACATATAA	126608333	False	NA	-3	True	TTTAAA	-13	NA	126608356	126625209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126608485_126617249_126617334_126624574
transcript_115322.known	chr5	+	1801	11	FSM	ENSG00000113368.12	ENST00000504788.5	1801	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	105.844414118082	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGGGGAGGGTAAATAA	126764380	True	NA	NA	False	NA	NA	NA	126777152	126836571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126777245_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_115323.known	chr5	+	2890	11	FSM	ENSG00000113368.12	ENST00000261366.10	2890	11	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_3	30.5162251925103	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTGTCCTTTTTAACGC	126764363	True	NA	18	True	AATAAA	-20	NA	126777135	126837020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126777868_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921_126819143_126820909_126821136_126822780_126822886_126825987_126826108_126832693_126832802_126836222
transcript_115325.known	chr5	+	730	6	FSM	ENSG00000113368.12	ENST00000472034.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	125.757862577256	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTCTCGTCGCATGCTG	126764388	True	NA	NA	False	AAAAAG	-1	NA	126777160	126818979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_126777253_126804775_126804933_126805570_126805697_126810179_126810351_126811772_126811899_126818921
transcript_11533.known	chr1	-	849	4	FSM	ENSG00000163479.14	ENST00000529008.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	816.582444636724	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTAAGGGGTTTTCTAATAA	-155997686	True	NA	-39	True	NA	NA	NA	156020917	156009085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156018269_156018369_156020012_156020168_156020887
transcript_115330.nnic	chr5	-	841	3	Antisense	novelGene_ENSG00000113368.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGCCTCTGGAATCTCC	-126845370	True	NA	NA	False	AATAAA	-19	NA	126845403	126835111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_126835554_126842741_126842844_126845106
transcript_11534.known	chr1	-	825	4	FSM	ENSG00000163479.14	ENST00000496742.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	779.457931300123	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTTAGAGAAGTGCTTA	-155997702	True	NA	-58	True	AATGAA	-37	NA	156020933	156009104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156020012_156020168_156020887
transcript_115342.known	chr5	-	3946	5	FSM	ENSG00000173926.6	ENST00000308660.6	3946	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	10.8282039138539	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTTGTCTTTCATTG	-127029962	True	NA	NA	False	AATAAA	-20	NA	127030558	126867713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_126870792_126878184_126878395_126914929_126915135_126917983_126918228_127030349
transcript_11535.known	chr1	-	1040	5	FSM	ENSG00000163479.14	ENST00000480176.5	1040	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	741.905148924039	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGGATACCCAGTGTC	-155997704	True	NA	-82	True	AATGAA	-13	NA	156020935	156009128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156018131_156018369_156020012_156020168_156020887
transcript_115351.nic	chr5	-	1055	4	NIC	ENSG00000173926.6	novel	764	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	23.4426012966897	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTACTCATTATTTC	-127029965	True	NA	NA	False	AAGAAA	-7	NA	127030561	126898872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_126899267_126914929_126915135_126917983_126918228_127030349
transcript_115356.nic	chr5	-	1659	3	ISM	ENSG00000173926.6	ENST00000308660.6	3946	5	-57	46272	-57	675	5prime_fragment	FALSE	canonical	3	43	junction_2	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAGTTGGATATTG	-127030604	False	NA	NA	False	NA	NA	NA	127030615	126913985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_126915135_126917983_126918228_127030349
transcript_115358.nic	chr5	-	553	2	ISM	ENSG00000173926.6	ENST00000308660.6	3946	5	-57	50227	-57	-3010	5prime_fragment	FALSE	canonical	3	43	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTTTGTCAGATGGAA	-127030604	False	NA	NA	False	AATAAA	-22	NA	127030615	126917940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_126918228_127030349
transcript_11536.known	chr1	-	1712	5	FSM	ENSG00000163479.14	ENST00000488179.6	1712	5	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_2	782.701212149311	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCCACATTGACTTGTC	-155996940	False	23231	-15	True	AATAAA	-4	NA	156020171	156009061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156012566_156014960_156015070_156018269_156018369_156020012
transcript_115360.known	chr5	-	2977	6	FSM	ENSG00000164241.14	ENST00000508527.5	2977	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	19.7524682002022	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAGAAAAAGAAAACA	-127073041	True	NA	NA	False	AAGAAA	-41	NA	127073480	127045358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127047916_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_115363.known	chr5	-	600	6	FSM	ENSG00000164241.14	ENST00000682830.1	600	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	19.0850727009357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCTGACTGATGCCCTC	-127073053	True	NA	NA	False	AAAACA	-29	NA	127073492	127051779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127051948_127052612_127052670_127056396_127056507_127058881_127059003_127071583_127071686_127073450
transcript_115367.known	chr5	-	3017	5	FSM	ENSG00000164241.14	ENST00000535381.6	3017	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.2534243362718	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTGTGTTGTTTTAAGC	-127073067	True	NA	NA	False	NA	NA	NA	127073506	127045234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127047916_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_115369.known	chr5	-	478	5	FSM	ENSG00000164241.14	ENST00000607731.5	478	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.8432380351327	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCATGAAGCCTATTC	-127073028	True	NA	NA	False	AATAAA	-19	NA	127073467	127051303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127051485_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_11537.known	chr1	-	1148	6	FSM	ENSG00000163479.14	ENST00000484320.6	1148	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	714.803189696297	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGTTAGAGAAGTGCT	-155997681	True	NA	-60	True	AATGAA	-35	NA	156020912	156009106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156009651_156011809_156011888_156014960_156015070_156018131_156018369_156020012_156020168_156020887
transcript_115370.known	chr5	-	976	5	FSM	ENSG00000164241.14	ENST00000296662.10	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	16.872685026397	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGCATGAAGCCTATTC	-127073063	True	NA	NA	False	AATAAA	-19	NA	127073502	127051303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127051948_127052612_127052670_127058881_127059003_127071583_127071686_127073450
transcript_115377.known	chr5	-	553	4	FSM	ENSG00000164241.14	ENST00000509733.7	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	12.2292908852294	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTAGCAGGTGCAGCAT	-127073053	True	NA	NA	False	NA	NA	NA	127073492	127052381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127052670_127058881_127059003_127071583_127071686_127073450
transcript_115379.nic	chr5	-	1157	3	ISM	ENSG00000164241.14	ENST00000509733.7	553	4	-56	5664	-42	707	5prime_fragment	FALSE	canonical	3	46	junction_2	10.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTTAATAAAGATACCT	-127073109	True	NA	NA	False	AATAAA	-15	NA	127073548	127058045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_127059003_127071583_127071686_127073450
transcript_11538.known	chr1	-	3582	11	FSM	ENSG00000160803.8	ENST00000368309.4	3582	11	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	20.5951450589696	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTGGCGTTTGTTTTT	-156053098	True	NA	NA	False	AATAAA	-23	NA	156053798	156035298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156037131_156041484_156041672_156041871_156041988_156042152_156042237_156042773_156042914_156043997_156044224_156048500_156048660_156050290_156050554_156051109_156051328_156051705_156051858_156053593
transcript_115381.known	chr5	-	719	3	FSM	ENSG00000283897.2	ENST00000656996.1	719	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCAGCTATTGGGG	NA	False	NA	NA	False	ACTAAA	-37	NA	127229828	127227616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127228154_127228850_127228919_127229714
transcript_115385.known	chr5	-	635	3	FSM	ENSG00000283897.2	ENST00000640865.1	635	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCAGCTATTGGGG	-127229716	True	NA	NA	False	ACTAAA	-37	NA	127229754	127227616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127228154_127228860_127228919_127229714
transcript_115389.nic	chr5	-	510	3	ISM	ENSG00000286615.2	ENST00000656856.1	1946	4	-53	32461	-2	23746	5prime_fragment	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTGGTTTCTGTCTT	-127290591	True	NA	NA	False	AATAAA	-23	NA	127290709	127264437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_127264719_127282212_127282310_127290577
transcript_115390.nic	chr5	-	501	3	ISM	ENSG00000286615.2	ENST00000652915.1	769	4	-5	31245	-5	23746	5prime_fragment	FALSE	canonical	1	1	junction_2	1	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAATTGGTTTCTGTCTT	-127290618	True	NA	NA	False	AATAAA	-23	NA	127290736	127264437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_127264719_127282212_127282310_127290613
transcript_115392.nic	chr5	+	2049	4	ISM	ENSG00000145794.17	ENST00000508365.5	2365	14	-405	83055	-355	-75943	5prime_fragment	FALSE	canonical	3	73	junction_1	7.48331477354788	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATACGTTGTGAATAT	NA	False	NA	NA	False	AAAAAG	-8	NA	127290440	127341726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_127291057_127331290_127331425_127339119_127339222_127340529
transcript_115393.nnic	chr5	+	714	3	NNC	ENSG00000145794.17	novel	2238	15	NA	NA	-26	-108734	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTATTTTGGTTTCTG	127289425	True	NA	NA	False	AATAAA	-20	NA	127290769	127308935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_127291057_127299995_127300051_127308563
transcript_115400.known	chr5	+	4664	9	FSM	ENSG00000164244.21	ENST00000296666.13	4664	9	0	0	0	0	multi-exon	TRUE	canonical	3	367	junction_8	35.1567916624939	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGTATAGCGATTTT	127508299	True	NA	17	True	AATAAA	-20	NA	127517639	127555085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_115405.nic	chr5	+	1817	9	NIC	ENSG00000164244.21	novel	837	2	NA	NA	-18	152	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	117.954374124065	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGATTTGCTTTGGCTTC	127517746	True	NA	10	True	ATTAAA	-28	NA	127517927	127552303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_127518000_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706
transcript_115407.known	chr5	+	2726	10	FSM	ENSG00000164244.21	ENST00000512635.2	2726	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	132.589126791038	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCAAAGTTGTATAGCGA	127508315	True	NA	13	True	AATAAA	-16	NA	127517655	127555081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_127517777_127523459_127523583_127524530_127524921_127526617_127526779_127530293_127530397_127533622_127533787_127539039_127539144_127547818_127547922_127551706_127551879_127553796
transcript_115408.nnic	chr5	+	748	5	NNC	ENSG00000230561.6	novel	916	7	NA	NA	13132	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.48746859276655	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGGTAAAGTCTGATACC	127752627	True	NA	NA	False	AATAAA	-17	NA	127752669	127941507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_127752795_127754267_127754376_127797102_127797235_127798105_127798163_127941181
transcript_115417.known	chr5	-	2654	4	FSM	ENSG00000245937.9	ENST00000499346.7	2654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.0184900284226	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	-128082790	True	NA	NA	False	NA	NA	NA	128083100	127939151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082734
transcript_115418.known	chr5	-	2318	4	FSM	ENSG00000245937.9	ENST00000514409.6	2318	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACTCGGGAGGCTGAGGC	-128082787	True	NA	NA	False	AATACA	-40	NA	128083097	127939249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127941221_127956803_127956922_128061143_128061245_128082969
transcript_115421.known	chr5	-	1601	4	FSM	ENSG00000245937.9	ENST00000501652.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATCAAGAGCGTGTGTG	-128082664	True	NA	NA	False	AATAAA	-15	NA	128082974	127965887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_127966929_128061143_128061245_128081972_128082192_128082734
transcript_115425.known	chr5	-	3209	3	FSM	ENSG00000245937.9	ENST00000668567.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAACAGATTCTTGCAA	-128083058	False	NA	NA	False	AATACA	-16	NA	128083131	128021587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128024299_128061143_128061245_128082734
transcript_115426.known	chr5	-	2997	3	FSM	ENSG00000245937.9	ENST00000501702.7	2997	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAATAAACTTTAGAAT	-128082784	True	NA	NA	False	AATGAA	-25	NA	128083094	128021527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128024299_128061143_128061245_128082969
transcript_115427.known	chr5	-	4027	3	FSM	ENSG00000245937.9	ENST00000654888.1	4027	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGGGATTCTACTGAAGA	-128083099	False	NA	NA	False	CATAAA	-9	NA	128083172	128057156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_128060645_128061143_128061245_128082734
transcript_115436.known	chr5	+	2863	10	FSM	ENSG00000113396.13	ENST00000262462.9	2863	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.76095228569523	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTTTATGTATCC	128965163	True	NA	10	True	AATAAA	-20	NA	128965487	129033635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_128966619_128985132_128985337_128988599_128988759_128990339_128990465_129015884_129016080_129023619_129023711_129027132_129027332_129028344_129028443_129029576_129029708_129033105
transcript_115438.known	chr5	+	1942	5	FSM	ENSG00000066583.12	ENST00000173527.6	1942	5	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	23.2969955144435	309	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGTGATTGAAATTAT	129089852	True	NA	6	True	ATTAAA	-15	NA	129094748	129114028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_129095076_129104955_129105076_129105184_129105389_129106945_129107063_129112854
transcript_115439.nnic	chr5	-	1341	3	NNC	ENSG00000249421.2	novel	786	2	NA	NA	-566	422	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTCAGACCAGGTGAGAT	-129461624	False	NA	-14	True	ATTAAA	-15	NA	129461642	129459136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_129460080_129460424_129460740_129461559
transcript_115440.known	chr5	-	786	2	FSM	ENSG00000249421.2	ENST00000502827.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGGTAGAGGTGCCTC	-129460671	False	NA	NA	False	NA	NA	NA	129460689	129459558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_129460080_129460424
transcript_115443.known	chr5	-	3583	3	FSM	ENSG00000251680.6	ENST00000661736.1	3583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCAATTCTTGAAAGTGG	-129905567	False	NA	NA	False	AATAAA	-15	NA	129905612	129769939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_129773441_129899460_129899510_129905579
transcript_115444.nnic	chr5	-	475	3	NNC	ENSG00000287390.1	novel	2582	6	NA	NA	126001	-154624	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0.5	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTTGTTCTCTGAAATT	-130818140	True	NA	NA	False	AATAAA	-17	NA	130818177	130810006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_130810268_130811575_130811693_130818080
transcript_115450.known	chr5	+	6219	5	FSM	ENSG00000186687.16	ENST00000379380.9	6219	5	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	12	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGAGTGATAGTATTGT	131169813	True	NA	15	True	AATAAA	-25	NA	131170943	131205428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131187027_131187110_131199530
transcript_115455.known	chr5	-	619	5	FSM	ENSG00000169567.13	ENST00000504202.1	619	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	131.985794690186	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTAATGATTGTTGGCA	-131133072	True	NA	NA	False	AATAAA	-45	NA	131165220	131159603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165059
transcript_115456.known	chr5	+	317	4	FSM	ENSG00000186687.16	ENST00000507584.1	317	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	65.3214274866134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGCAAAAGTCCTGGAAA	131169858	True	NA	NA	False	AATACA	-38	NA	131170988	131199653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131171039_131180094_131180168_131182228_131182300_131199530
transcript_11546.known	chr1	+	621	4	FSM	ENSG00000116586.12	ENST00000368305.9	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_3	89.1827088372828	11674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156044136	True	NA	37	True	AATAAA	-16	NA	156054781	156058506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156054958_156055262_156055426_156057977_156058068_156058314
transcript_115461.known	chr5	-	902	4	FSM	ENSG00000169567.13	ENST00000675135.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2062.86618298155	953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	-131164535	False	NA	-6	True	AATAAA	-26	NA	131164612	131159284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131162571_131162677_131163330_131163493_131164304
transcript_115466.known	chr5	+	604	3	FSM	ENSG00000186687.16	ENST00000510516.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	70	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCAATTATTACATTTAAA	131169813	True	NA	NA	False	NA	NA	NA	131170943	131199966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131171039_131180094_131180168_131199530
transcript_115474.known	chr5	-	3080	3	FSM	ENSG00000169567.13	ENST00000675372.1	3080	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_2	2022	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGGTACAAATGATAGT	-131133185	True	NA	NA	False	AATAAA	-2	NA	131165333	131156910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131162571_131162677_131165059
transcript_115478.known	chr5	-	825	4	FSM	ENSG00000169567.13	ENST00000508495.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2235.65923660611	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTGAGTGTTGCGTT	-131133153	True	NA	-9	True	AATAAA	-23	NA	131165301	131159287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131160655_131160845_131162571_131162677_131165094
transcript_115479.known	chr5	-	1032	5	FSM	ENSG00000169567.13	ENST00000511475.6	1032	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2050.93349173005	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTGTTGCGTTTGA	-131133201	True	NA	-6	True	AATAAA	-26	NA	131165349	131159284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131159612_131160655_131160885_131162361_131162478_131162571_131162677_131165094
transcript_115481.nnic	chr5	+	1605	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	18	-539	at_least_one_novel_splicesite	FALSE	canonical	3	145	junction_5	28.5475042692001	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGCATTCATTCTGTTGT	131261711	True	NA	4	True	AATAAA	-18	NA	131264026	131392567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_115482.nnic	chr5	+	3705	6	NNC	ENSG00000158985.14	novel	3591	6	NA	NA	18	-5	intron_retention	FALSE	canonical	3	145	junction_5	28.5475042692001	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTTGGCCTTTCCTTT	131261711	True	NA	18	True	AATAAA	-14	NA	131264026	131394667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391828
transcript_115483.known	chr5	+	3591	6	FSM	ENSG00000158985.14	ENST00000360515.7	3591	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	72.9783529548317	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTAGTTTTTCTTTT	131261759	True	NA	41	True	AATAAA	-37	NA	131264074	131394690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131264167_131315975_131316145_131359208_131359548_131385542_131385645_131390992_131391109_131391917
transcript_115489.nic	chr5	+	506	3	ISM	ENSG00000158985.14	ENST00000503291.5	2025	6	-41	33701	18	23	5prime_fragment	FALSE	canonical	3	168	junction_1	18	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATCGTATTGAGGAGCG	131261711	True	NA	NA	False	AATAAA	-23	NA	131264026	131359405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_131264167_131315975_131316145_131359208
transcript_115490.known	chr5	+	2025	6	FSM	ENSG00000158985.14	ENST00000503291.5	2025	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	90.9571327604383	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATGTCCAATTCAAGCC	131261752	True	NA	4	True	ATTAAA	-14	NA	131264067	131393106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_131264167_131315975_131316145_131359208_131359559_131385542_131385645_131390992_131391109_131391917
transcript_115495.known	chr5	-	1720	13	FSM	ENSG00000217128.13	ENST00000511848.1	1720	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	7.58287544405155	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAAGCATCTCTGCTTT	-131794919	True	NA	NA	False	AATAAA	-23	NA	131797016	131677596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131677873_131679028_131679176_131698916_131699003_131704064_131704267_131706410_131706547_131709200_131709273_131710577_131710662_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_115496.nnic	chr5	-	1189	7	NNC	ENSG00000217128.13	novel	6388	17	NA	NA	-66	-37992	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	13.8493882736948	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACGAAATCTCTTTTCTTT	-131794986	True	NA	NA	False	AATAAA	-21	NA	131797083	131715588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_131715994_131716564_131716657_131718985_131719061_131719316_131719418_131730903_131731039_131744563_131744691_131796829
transcript_115501.known	chr5	-	1373	1	FSM	ENSG00000217128.13	ENST00000623690.1	1373	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCTCTCTTTAAACATT	-131794883	True	NA	NA	False	AATAAA	-14	NA	131796980	131795607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131795600_131797000
transcript_115502.nnic	chr5	+	584	3	NNC	ENSG00000231585.1	novel	459	3	NA	NA	-584	2330	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTATTTTTG	NA	False	NA	NA	False	AATAAA	-19	NA	132010863	132015529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_132011073_132011296_132011546_132015403
transcript_115504.known	chr5	-	4713	21	FSM	ENSG00000164398.15	ENST00000652493.1	4713	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	3.2291639784935	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGAAACCCCGTCTCTAC	-132011552	False	NA	NA	False	NA	NA	NA	132011563	131951789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_131954372_131959535_131959608_131960519_131960622_131962534_131962679_131966415_131966533_131967939_131968029_131970127_131970201_131971549_131971646_131972723_131972859_131973265_131973401_131974892_131975061_131976647_131976722_131985406_131985459_131986821_131986855_131988047_131988227_131988804_131988905_131989406_131989509_131990099_131990165_131990852_131990968_131994030_131994252_132011504
transcript_115506.known	chr5	-	2230	16	FSM	ENSG00000072682.20	ENST00000166534.8	2230	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	46.8797042083956	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226488	True	NA	0	True	AATAAA	-24	NA	132227857	132192609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198205_132198272_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_115508.nic	chr5	-	2265	16	NIC	ENSG00000072682.20	novel	2223	16	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_15	35.1917919723083	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132227851	False	NA	0	True	AATAAA	-24	NA	132227898	132192609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227222_132227789
transcript_115509.known	chr5	-	2223	16	FSM	ENSG00000072682.20	ENST00000379086.5	2223	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_15	40.1161646554935	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTTACTTGGAGTATTT	-132226450	True	NA	0	True	AATAAA	-24	NA	132227819	132192609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132193081_132194925_132195023_132195411_132195481_132198320_132198381_132198878_132198933_132203747_132203848_132204081_132204153_132207707_132207885_132209137_132209332_132210283_132210524_132213915_132214054_132217196_132217349_132217751_132217849_132218544_132218645_132227085_132227259_132227789
transcript_115515.known	chr5	+	2257	7	FSM	ENSG00000131435.13	ENST00000253754.8	2257	7	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_3	19.3907194296653	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTTCTCTGATTACC	132256217	True	NA	NA	False	AGTAAA	-23	NA	132257695	132273454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132271790_132271909_132272024
transcript_115516.known	chr5	+	1006	6	FSM	ENSG00000131435.13	ENST00000379018.7	1006	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	67.0957524736104	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACCTGGCCTGCCAC	132256228	True	NA	30	True	AATAAA	-22	NA	132257706	132272332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132257828_132262608_132262761_132266463_132266546_132270914_132271094_132271302_132271467_132272024
transcript_115518.known	chr5	-	733	2	FSM	ENSG00000233006.8	ENST00000457998.2	733	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGTATGATAGAAGAAAG	-132369530	True	NA	NA	False	NA	NA	NA	132369648	132366280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132366782_132369416
transcript_11552.known	chr1	+	521	3	FSM	ENSG00000116586.12	ENST00000368304.9	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	744.5	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156044146	True	NA	37	True	AATAAA	-16	NA	156054791	156058506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156054958_156055262_156055426_156058314
transcript_115523.known	chr5	-	3554	10	FSM	ENSG00000125347.15	ENST00000245414.9	3554	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.91578004149024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCAGTGGTTACCA	-132490335	True	NA	NA	False	AATAAA	-18	NA	132490773	132481608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486250_132486374_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_115525.known	chr5	-	1216	9	FSM	ENSG00000125347.15	ENST00000680903.1	1216	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.36396103067893	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGATGGGGCCTCCCTCCT	-132490339	True	NA	NA	False	NA	NA	NA	132490777	132483827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132484076_132484361_132484498_132485666_132485717_132486556_132486687_132486794_132486845_132486953_132487131_132487925_132488026_132489391_132489484_132490544
transcript_115526.known	chr5	+	942	4	FSM	ENSG00000197536.11	ENST00000378953.8	942	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.10960933531265	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCTATCTCCAGTACTG	132410620	False	NA	NA	False	AATAAA	-21	NA	132410635	132476044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132411042_132419822_132419941_132449649_132449690_132475666
transcript_115528.known	chr5	+	8272	25	FSM	ENSG00000113522.14	ENST00000378823.8	8272	25	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	19.639812173802	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCTTTCTCCCAGAACT	132551755	True	NA	17	True	AATAAA	-26	NA	132556976	132646349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572_132595811_132603299_132603490_132603919_132604047_132604805_132605000_132608614_132608726_132609116_132609210_132609282_132609397_132616002_132616131_132618069_132618295_132637114_132637201_132638080_132638224_132640671_132640806_132642177
transcript_115530.nic	chr5	+	2587	13	ISM	ENSG00000113522.14	ENST00000378823.8	8272	25	-74	50581	-27	0	5prime_fragment	TRUE	canonical	3	110	junction_4	16.1010265373223	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGCGGCGTGATGAAA	132556867	False	NA	NA	False	GATAAA	-33	NA	132556902	132595768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_132557454_132559283_132559368_132575776_132575929_132579316_132579503_132579861_132580067_132587561_132587691_132587923_132588090_132588686_132588881_132589630_132589838_132591223_132591407_132591876_132592035_132594868_132595045_132595572
transcript_115534.known	chr5	-	4394	10	FSM	ENSG00000164402.14	ENST00000296873.11	4394	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	61.7521929435169	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGTGTCTTTTTTGGG	-132777397	False	NA	0	True	ATTAAA	-21	NA	132777421	132756000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132758825_132760801_132760993_132761132_132761266_132761457_132761627_132761799_132761897_132762483_132762646_132763705_132763893_132764223_132764420_132765408_132765530_132777107
transcript_115544.known	chr5	+	1573	3	FSM	ENSG00000164405.11	ENST00000378670.8	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	4175	junction_1	721	35744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAATTATCTTTTTG	132851262	True	NA	NA	False	AATAAA	-19	NA	132866641	132868847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132866688_132866868_132867036_132867487
transcript_11555.known	chr1	+	623	3	FSM	ENSG00000116586.12	ENST00000487106.5	623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1443	junction_2	107.5	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156055068	False	NA	37	True	AATAAA	-16	NA	156055084	156058506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156055426_156057977_156058068_156058314
transcript_115551.known	chr5	+	509	2	FSM	ENSG00000164405.11	ENST00000480372.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGTGATGATAGTTGCA	132851277	True	NA	NA	False	NA	NA	NA	132866656	132867342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132866692_132866868
transcript_115552.known	chr5	+	258	2	FSM	ENSG00000164405.11	ENST00000496429.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTTTGTGAGTAGAAT	132851262	True	NA	24	True	AATAAA	-29	NA	132866641	132867699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132866688_132867487
transcript_115553.known	chr5	+	586	2	FSM	ENSG00000164405.11	ENST00000378665.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	5617	junction_1	0	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTGTTGTGATATTACA	132851266	True	NA	8	True	AATAAA	-13	NA	132866645	132867683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_132867036_132867487
transcript_115559.known	chr5	-	1729	5	FSM	ENSG00000072364.13	ENST00000465484.1	1729	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.56195171219375	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGGCATAGTGGCACAGG	-132963500	False	NA	NA	False	NA	NA	NA	132963513	132926700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132927208_132932177_132932223_132934146_132934942_132937066_132937194_132963258
transcript_11556.known	chr1	+	462	3	FSM	ENSG00000116586.12	ENST00000463371.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	703	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTTGGCTACTTTCTT	156055471	False	NA	37	True	AATAAA	-16	NA	156055495	156058506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156055676_156057977_156058068_156058314
transcript_115564.known	chr5	-	2178	4	FSM	ENSG00000155329.12	ENST00000324170.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	23.3285709425636	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTATCTCTTTAGTG	-133021737	True	NA	-4	True	AATAAA	-29	NA	133026604	132996984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132998851_133000131_133000174_133006758_133006921_133026496
transcript_115565.known	chr5	-	2160	5	FSM	ENSG00000155329.12	ENST00000355372.6	2160	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.103767933119	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAGCTTAAACTTCTGTTA	-133021682	True	NA	-15	True	AATAAA	-18	NA	133026549	132996995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_132998833_133000131_133000174_133006758_133006921_133022840_133022907_133026496
transcript_115566.known	chr5	-	325	3	FSM	ENSG00000155329.12	ENST00000504170.2	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	37	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTCTGGTGGATATTTT	-133021722	True	NA	NA	False	AATAAA	-13	NA	133026589	133019037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133019204_133022840_133022907_133026496
transcript_115567.known	chr5	-	829	1	FSM	ENSG00000286408.1	ENST00000665702.1	829	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTGATTTGTCGTTT	-133051778	True	NA	0	True	NA	NA	NA	133051893	133051064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133051100_133051900
transcript_115575.known	chr5	+	4774	19	FSM	ENSG00000170606.16	ENST00000304858.7	4774	19	0	0	0	0	multi-exon	FALSE	canonical	3	1376	junction_6	150.270589271487	1752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTCCTTAATTCCATAA	133020091	True	NA	16	True	AATAAA	-23	NA	133052012	133106449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_133052358_133064979_133065038_133067416_133067558_133070373_133070497_133073229_133073330_133073992_133074127_133076653_133076899_133086781_133086859_133088403_133088556_133089054_133089162_133089561_133089696_133091192_133091375_133092699_133092790_133096097_133096251_133097160_133097287_133099544_133099653_133101758_133101879_133103864_133104027_133104232
transcript_11559.known	chr1	+	681	4	FSM	ENSG00000132698.15	ENST00000473336.5	681	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	75.7246473892234	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	156058381	False	NA	26	True	AATAAA	-16	NA	156061382	156070504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156061444_156068269_156068464_156069670_156069752_156070159
transcript_115597.known	chr5	+	203	1	FSM	ENSG00000279691.1	ENST00000623366.1	203	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCAATCGCTTTTGTT	133052750	False	NA	14	True	AATAAA	-19	NA	133052768	133052971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_133052800_133053000
transcript_11560.known	chr1	+	868	3	FSM	ENSG00000132698.15	ENST00000487325.5	868	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	61	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGCATGGGCTCTAAATC	156058204	True	NA	NA	False	NA	NA	NA	156061205	156070106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156061444_156068269_156068464_156069670
transcript_115603.known	chr5	-	487	3	FSM	ENSG00000113583.8	ENST00000509913.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCTCATGCTGAACAGT	-133960226	True	NA	NA	False	AATGAA	-23	NA	133968625	133959777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133960021_133967395_133967460_133968445
transcript_115605.known	chr5	-	2188	3	FSM	ENSG00000113583.8	ENST00000231512.5	2188	3	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	18	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCACGAGTGTGTTTC	-133960226	True	NA	-9	True	AATAAA	-20	NA	133968625	133955509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133956991_133959493_133960021_133968445
transcript_115607.known	chr5	-	635	2	FSM	ENSG00000113583.8	ENST00000507191.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGCTGTTGTTTACATT	-133960275	True	NA	NA	False	NA	NA	NA	133968674	133959534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133960021_133968525
transcript_115611.known	chr5	-	1839	9	FSM	ENSG00000213585.11	ENST00000265333.8	1839	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	683.237593648798	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTTAGATTTATTTT	-134004962	False	NA	-15	True	AATAAA	-17	NA	134004975	133971870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993019_134004894
transcript_115616.known	chr5	-	1807	9	FSM	ENSG00000213585.11	ENST00000395044.7	1807	9	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_8	482.883008605604	3031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTTCTGTTGTCTTTA	-133969308	True	NA	-6	True	AATAAA	-15	NA	134004742	133971914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_133972863_133973790_133973849_133975870_133976022_133980728_133980957_133990854_133990908_133991001_133991155_133992305_133992356_133992945_133993016_134004646
transcript_115626.known	chr5	-	4582	7	FSM	ENSG00000113575.10	ENST00000481195.6	4582	7	0	0	0	0	multi-exon	FALSE	canonical	3	1561	junction_1	75.6791472820177	1454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTTTGACATATTTCT	-134205563	True	NA	-16	True	ATTAAA	-16	NA	134226073	134194331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134197845_134199085_134199205_134200334_134200497_134200984_134201075_134201847_134202022_134205921_134206132_134225759
transcript_115627.known	chr5	-	802	7	FSM	ENSG00000113558.19	ENST00000522855.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	3101.07886692501	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCAAACCTTACGGCCA	-134123014	True	NA	-54	True	NA	NA	NA	134176950	134157571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176854
transcript_11563.known	chr1	+	1100	5	FSM	ENSG00000132698.15	ENST00000361084.10	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	32.4152741774615	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTCATTCCACTGCC	156058158	True	NA	26	True	AATAAA	-16	NA	156061159	156070504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156061444_156065910_156066107_156068269_156068464_156069670_156069752_156070159
transcript_115651.known	chr5	-	9386	6	FSM	ENSG00000113558.19	ENST00000353411.11	9386	6	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_2	204.604594278819	10034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAACTTTTTAAAAAGTGG	-134123014	True	NA	-11	True	AATAAA	-37	NA	134176950	134148934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_115652.known	chr5	-	899	6	FSM	ENSG00000113558.19	ENST00000521216.5	899	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2696.44991794767	3026	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCATTGTAAATAAAACAACT	-134122984	True	NA	41	True	TTTAAA	-6	NA	134176920	134157391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158629_134161019_134161131_134167169_134167244_134173925_134174023_134176854
transcript_115653.known	chr5	-	1683	5	FSM	ENSG00000113558.19	ENST00000522552.5	1683	5	0	0	0	0	multi-exon	FALSE	canonical	3	6347	junction_1	212.073542668575	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCTTTATTCATGAGT	-134123028	True	NA	95	True	AATAAA	-41	NA	134176964	134157337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134176854
transcript_115654.known	chr5	-	876	7	FSM	ENSG00000113558.19	ENST00000517625.5	876	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3108.85968733804	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACTGAACTGTGGGT	-134176697	False	NA	10	True	NA	NA	NA	134176719	134157507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134157769_134158454_134158596_134160986_134161131_134167169_134167244_134173925_134174023_134174461_134174515_134176613
transcript_115655.known	chr5	+	1418	1	FSM	ENSG00000270177.1	ENST00000602919.1	1418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTATTCTTTACCGTTGCC	134226336	True	NA	NA	False	TATAAA	-24	NA	134226409	134227827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134226400_134227800
transcript_115668.nic	chr5	-	1014	6	ISM	ENSG00000273345.5	ENST00000520515.5	1744	10	-6	102387	-5	-102047	5prime_fragment	FALSE	canonical	2	5	junction_5	3.26190128606002	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-134370828	True	NA	0	True	ATTAAA	-17	NA	134371049	134308000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_134308467_134308573_134308728_134312291_134312381_134319357_134319498_134321790_134321904_134370997
transcript_11567.known	chr1	+	1514	10	FSM	ENSG00000160789.24	ENST00000675431.1	1514	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	55.4576915815611	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGGCCTTTCT	156125917	True	NA	12	True	ATTAAA	-19	NA	156126174	156137866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156126224_156130616_156130774_156134402_156134529_156134804_156134976_156135186_156135313_156135900_156136122_156136213_156136437_156136920_156137029_156137112_156137233_156137653
transcript_115680.nic	chr5	-	860	5	ISM	ENSG00000006837.12	ENST00000519312.5	1198	9	-2	21563	-2	0	5prime_fragment	FALSE	canonical	2	5	junction_4	2.8613807855649	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-134370828	True	NA	0	True	ATTAAA	-17	NA	134371049	134308000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_134308467_134312291_134312381_134319357_134319498_134321790_134321904_134370997
transcript_115688.nnic	chr5	-	771	4	NIC	ENSG00000006837.12	novel	1501	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	3.85861230093008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-134370828	True	NA	0	True	ATTAAA	-17	NA	134371049	134308000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_134308467_134319357_134319498_134321790_134321904_134370997
transcript_115692.known	chr5	-	586	3	FSM	ENSG00000006837.12	ENST00000521755.1	586	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTCTTATG	-134370783	True	NA	0	True	ATTAAA	-17	NA	134371004	134308000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134308467_134321790_134321904_134370997
transcript_115699.known	chr5	+	2241	6	FSM	ENSG00000119048.8	ENST00000265339.7	2241	6	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	9.04654630231891	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAACTATAGACATTCA	134369552	True	NA	NA	False	AAAAAG	-39	NA	134371568	134392108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388324_134388414_134390224
transcript_115707.known	chr5	+	415	4	FSM	ENSG00000119048.8	ENST00000510021.5	415	4	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_2	95.0099410003442	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATGAGAAAAGAGTTT	134369452	True	NA	NA	False	AAAACA	-5	NA	134371468	134390298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134371640_134374382_134374464_134388324_134388414_134390224
transcript_11571.known	chr1	+	472	4	FSM	ENSG00000160789.24	ENST00000470835.1	472	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	NA	False	NA	22	True	AATAAA	-18	NA	156082630	156093811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156082664_156082947_156083185_156090998_156091098_156093708
transcript_115710.known	chr5	+	235	2	FSM	ENSG00000119048.8	ENST00000504431.1	235	2	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAGATAAATTAGAAAAAAA	134369589	False	NA	NA	False	ACTAAA	-5	NA	134371605	134374583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134371640_134374382
transcript_115711.known	chr5	+	644	6	FSM	ENSG00000119048.8	ENST00000507277.1	644	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	86.9551608589162	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTGTATTTTTTTCC	134369587	False	NA	5	True	CATAAA	-12	NA	134371603	134390573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134371640_134374382_134374464_134376668_134376695_134380718_134380809_134388351_134388414_134390224
transcript_115715.known	chr5	-	800	2	FSM	ENSG00000237190.4	ENST00000395009.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGTATCTGAGAATATCT	-134395159	True	NA	-11	True	AATAAA	-17	NA	134411881	134410548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134411083_134411615
transcript_115716.known	chr5	-	1228	3	FSM	ENSG00000237190.4	ENST00000458198.3	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	23	1334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCAGGTAATTAATTT	-134395159	True	NA	-59	True	AATAAA	-38	NA	134411881	134402064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134402927_134409902_134410003_134411615
transcript_115717.nnic	chr5	-	692	3	NNC	ENSG00000250564.2	novel	1041	3	NA	NA	2959	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCCTTTTGTCATTTT	NA	False	NA	NA	False	AATAAA	-20	NA	134430200	134429052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_134429628_134429884_134429952_134430150
transcript_115718.known	chr5	+	6757	12	FSM	ENSG00000043143.22	ENST00000681547.2	6757	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	14.8863462872904	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTGTGAGGCTCCA	134524383	True	NA	4	True	AATAAA	-16	NA	134525669	134583227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134526012_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199_134562368_134564493_134564611_134566115_134566581_134573644_134573763_134576767_134576897_134578493
transcript_115720.known	chr5	+	1835	7	FSM	ENSG00000043143.22	ENST00000681792.1	1835	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	28.6089535324559	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTGCCTGGGTAACAGA	134526190	False	NA	NA	False	NA	NA	NA	134526218	134563282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134526287_134535857_134535916_134537988_134538084_134552051_134552210_134559829_134559991_134560745_134560958_134562199
transcript_115721.known	chr5	+	6389	23	FSM	ENSG00000113615.13	ENST00000398844.7	6389	23	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_8	21.8579656225602	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATAGTGACTAGTTATTT	134645161	True	NA	14	True	AATAAA	-20	NA	134648784	134727909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693726_134693934_134697125_134697247_134697898_134698058_134703758_134703933_134705326_134705438_134708712_134708889_134715023_134715162_134718068_134718174_134720997_134721091_134723566_134723671_134724979
transcript_115722.known	chr5	+	2700	13	FSM	ENSG00000113615.13	ENST00000322887.8	2700	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	37.8303963617735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTTTTCTTGCTTTGT	134645200	True	NA	6	True	AATAAA	-16	NA	134648823	134693698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134649174_134661118_134661587_134666822_134666997_134671808_134671887_134674614_134674776_134675044_134675218_134676022_134676126_134679601_134679729_134682372_134682483_134686789_134686903_134688180_134688300_134692601_134692658_134693030
transcript_115728.known	chr5	-	929	8	FSM	ENSG00000152700.14	ENST00000439578.5	929	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	118.187329684527	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGAATTGAAAACTGATTC	-134630010	True	NA	NA	False	ATTAAA	-16	NA	134632774	134606801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632076_134632196_134632727
transcript_115731.known	chr5	-	6517	7	FSM	ENSG00000152700.14	ENST00000402673.7	6517	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	31.4572019664107	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGTGTCAAGTTCCATT	-134630064	True	NA	-1	True	AATAAA	-23	NA	134632828	134601148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134620932_134621053_134623961_134624038_134632727
transcript_115732.known	chr5	-	708	5	FSM	ENSG00000152700.14	ENST00000502539.5	708	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	126.03843659773	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTTGGTTTTTACAGTT	-134612814	True	NA	NA	False	CATAAA	-1	NA	134613086	134606737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134607067_134608371_134608504_134609570_134609675_134612690_134612757_134613009
transcript_115733.known	chr5	-	676	2	FSM	ENSG00000152700.14	ENST00000504242.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGTTCTTACATCAG	-134630045	True	NA	NA	False	ATTAAA	-15	NA	134632809	134631601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_134632196_134632727
transcript_115737.known	chr5	+	895	3	FSM	ENSG00000164615.6	ENST00000514518.1	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	85	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTAATGTTAACTCTGC	134734142	True	NA	15	True	AATAAA	-16	NA	134738582	134751377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134738793_134743986_134744053_134750758
transcript_115740.known	chr5	+	1470	2	FSM	ENSG00000164615.6	ENST00000676829.1	1470	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTACAGGCGTGAGCCAC	134734074	True	NA	NA	False	NA	NA	NA	134738514	134751950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134738793_134750758
transcript_115742.known	chr5	+	2171	4	FSM	ENSG00000164615.6	ENST00000297156.4	2171	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	7.78888096369861	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCTTTAAGTCTTGATT	134734107	True	NA	NA	False	ATTAAA	-23	NA	134738547	134752157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134738793_134741062_134741524_134743986_134744053_134750758
transcript_115747.known	chr5	+	3821	23	FSM	ENSG00000145833.16	ENST00000354283.8	3821	23	0	0	0	0	multi-exon	FALSE	canonical	2	223	junction_19	110.337620492141	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATTTTTTTGCATTTC	134738040	True	NA	13	True	AGTAAA	-13	NA	134758803	134829296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695_134773862_134777573_134777726_134781132_134781247_134781920_134782087_134782944_134783066_134784365_134784542_134785464_134785587_134788512_134788592_134790469_134790553_134794849_134795015_134795987_134796151_134807747_134807942_134811220_134811359_134811695_134811846_134816429_134816604_134817495_134817715_134818859_134819005_134826946_134827021_134828658
transcript_115759.nic	chr5	+	709	5	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-78	55552	-45	-4150	5prime_fragment	FALSE	canonical	3	501	junction_4	59.7426773755579	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTAGAAAAATGGCGAGAA	134758677	False	NA	12	True	AAGAAA	-19	NA	134758725	134773744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902_134771000_134773695
transcript_115762.nic	chr5	+	619	4	ISM	ENSG00000145833.16	ENST00000354283.8	3821	23	-78	58338	-45	-6936	5prime_fragment	FALSE	canonical	3	518	junction_1	58.116740751315	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAGATGACAAGGAGGAT	134758677	False	NA	-10	True	AAAAAG	-1	NA	134758725	134770958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_134758956_134763903_134764093_134766916_134767061_134770902
transcript_115763.known	chr5	+	5083	2	FSM	ENSG00000181904.9	ENST00000394976.4	5083	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTTTACTATGTTTTT	134843391	True	NA	19	True	AATAAA	-19	NA	134845967	134859735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134846213_134854897
transcript_115768.known	chr5	+	2893	5	FSM	ENSG00000113621.15	ENST00000507024.5	2893	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.8862460002504	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTGAGTCCACCTCTT	134871164	True	NA	24	True	TATAAA	-18	NA	134874396	134901511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874484_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_115773.known	chr5	+	1006	4	FSM	ENSG00000113621.15	ENST00000511070.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.2989033797144	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTTAAGGAAACCCTTG	134871138	True	NA	NA	False	NA	NA	NA	134874370	134900039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874531_134893491_134893656_134896293_134896425_134899488
transcript_115775.known	chr5	+	3090	5	FSM	ENSG00000113621.15	ENST00000358387.9	3090	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	15.7062885494951	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCACGCCTGTAATCCCAG	134871138	True	NA	6	True	AATAAA	-17	NA	134874370	134901635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134874531_134887694_134888183_134893491_134893656_134896293_134896425_134899488
transcript_115776.known	chr5	+	518	3	FSM	ENSG00000113621.15	ENST00000509954.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	68.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGTATTGCAATAAGCAAA	134893608	False	NA	18	True	TATAAA	-24	NA	134893625	134899857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134893656_134896305_134896425_134899488
transcript_115785.known	chr5	+	2365	4	FSM	ENSG00000132570.15	ENST00000254908.11	2365	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	10.6144555520604	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGCTATCTTGGTGTGT	134903401	True	NA	13	True	ATTAAA	-17	NA	134905130	134962644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585
transcript_115790.known	chr5	+	5621	5	FSM	ENSG00000132570.15	ENST00000512783.5	5621	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	50.2120503465055	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGACACTTTGTTTTGCTG	134903390	True	NA	NA	False	AATAAA	-20	NA	134905119	134969660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134905224_134910334_134910467_134959039_134959121_134960585_134960699_134964469
transcript_115791.nnic	chr5	+	398	2	NNC	ENSG00000132570.15	novel	2365	4	NA	NA	-5	-53406	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGACTTTTCTTTCCT	134903385	True	NA	6	True	AATAAA	-17	NA	134905114	134905689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_134905224_134905400
transcript_115792.known	chr5	+	457	1	FSM	ENSG00000279799.1	ENST00000623591.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGACTTTTCTTTCCTTT	134903505	False	NA	8	True	AATAAA	-19	NA	134905234	134905691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_134905200_134905700
transcript_115797.known	chr5	-	1881	9	FSM	ENSG00000113648.17	ENST00000304332.8	1881	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	232.810947981404	1772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGACTGGTGTGTTC	-135399843	True	NA	-9	True	AGTAAA	-12	NA	135399887	135334382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360605_135369405_135369604_135370035_135370143_135388921_135389127_135399748
transcript_115798.known	chr5	-	1314	9	FSM	ENSG00000113648.17	ENST00000510038.1	1314	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	247.296380887388	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTCACTCCTACTGGG	-135399840	True	NA	NA	False	AAGAAA	-8	NA	135399884	135334912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135352945_135353046_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399785
transcript_115803.known	chr5	-	1859	9	FSM	ENSG00000113648.17	ENST00000312469.8	1859	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	305.193381317485	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGATTTAGTAAAATGT	-135389281	True	NA	9	True	NA	NA	NA	135399211	135334409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135335142_135343259_135343435_135345967_135346058_135350822_135350914_135360496_135360608_135369405_135369604_135370035_135370143_135388921_135389127_135399061
transcript_115804.known	chr5	-	775	5	FSM	ENSG00000113648.17	ENST00000513210.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	292.272561147981	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATCTGTGTTTAGTTTG	-135389002	True	NA	-3	True	ATTAAA	-22	NA	135389059	135359721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135359943_135360496_135360608_135369405_135369604_135370035_135370143_135388921
transcript_115805.known	chr5	+	1464	8	FSM	ENSG00000145832.15	ENST00000433282.6	1464	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.14039335605413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCACATTGTTTCTCTGT	135834596	True	NA	NA	False	AATAAA	-14	NA	135834713	135883448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135883061
transcript_11581.nnic	chr1	+	562	2	NIC	ENSG00000160789.24	novel	472	4	NA	NA	95	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	156082707	False	NA	22	True	AATAAA	-18	NA	156082725	156093811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156083185_156093708
transcript_115812.nnic	chr5	+	998	5	NIC	ENSG00000145832.15	novel	1464	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	3.8405728739343	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACATTGTTTCTCTGTCA	135834542	True	NA	NA	False	AATAAA	-16	NA	135834659	135883450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135883061
transcript_115813.known	chr5	+	1148	5	FSM	ENSG00000145832.15	ENST00000412661.3	1148	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.8405728739343	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	135834609	True	NA	NA	False	AATAAA	-26	NA	135834726	135888637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135888031
transcript_115815.known	chr5	+	1734	8	FSM	ENSG00000145832.15	ENST00000681962.1	1734	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.33307168231517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTGAGATTTTTTTCA	135834545	True	NA	NA	False	AATAAA	-26	NA	135834662	135888637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_135834894_135842415_135842460_135850424_135850497_135852562_135852822_135871460_135871719_135874020_135874155_135879967_135880098_135888031
transcript_115816.known	chr5	-	1971	4	FSM	ENSG00000145824.13	ENST00000337225.5	1971	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTCTAGACTGCCACCT	NA	False	NA	0	True	AATAAA	-19	NA	135579279	135570682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_135571869_135574571_135574686_135578433_135578540_135578714
transcript_115817.known	chr5	+	2712	17	FSM	ENSG00000120708.17	ENST00000442011.7	2712	17	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_6	5.66237582645306	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCTGTGTGCATGGTACA	136028517	True	NA	NA	False	AATAAA	-15	NA	136028987	136063818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136029190_136033762_136033862_136044057_136044123_136046334_136046496_136046850_136047016_136047273_136047421_136049438_136049581_136052906_136053120_136053942_136054081_136054715_136054862_136055679_136055817_136056664_136056796_136059089_136059215_136060833_136060937_136061499_136061580_136062662_136062688_136063185
transcript_11582.nnic	chr1	+	633	2	NNC	ENSG00000160789.24	novel	472	4	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTATGCTCATCCATCC	156082854	False	NA	22	True	AATAAA	-18	NA	156082872	156093811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_156083185_156093490
transcript_115820.known	chr5	+	7013	8	FSM	ENSG00000113658.18	ENST00000545279.6	7013	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	45.6302799572783	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGTGTCTTTTTTTGT	136129890	True	NA	11	True	AATAAA	-13	NA	136132844	136182733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433_136172656_136174375_136174633_136177336
transcript_115824.nic	chr5	+	1579	6	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-46	9904	-46	0	5prime_fragment	FALSE	canonical	3	98	junction_1	52.3243729059413	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	NA	False	NA	7	True	AATAAA	-18	NA	136132798	136172829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855_136161108_136163271_136163392_136172433
transcript_115827.nic	chr5	+	1458	5	ISM	ENSG00000113658.18	ENST00000545620.5	6937	7	-2	9905	0	0	5prime_fragment	FALSE	canonical	3	84	junction_1	55.1424292174366	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGTCCTGCTTAGTG	136129890	True	NA	7	True	AATAAA	-18	NA	136132844	136172829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136153591_136154164_136160855_136161108_136163271_136163392_136172433
transcript_115829.nic	chr5	+	1100	4	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-46	21589	-46	6981	5prime_fragment	FALSE	canonical	3	98	junction_1	59.0160053620108	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTAAGAATCACAGTTGT	NA	False	NA	NA	False	NA	NA	NA	136132798	136161144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136147831_136147907_136153591_136154164_136160855
transcript_115830.known	chr5	+	588	4	FSM	ENSG00000113658.18	ENST00000514777.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.7995078980967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGAGATTCATCTTCATG	136129949	True	NA	NA	False	NA	NA	NA	136132903	136177386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136172433_136172656_136174375_136174633_136177336
transcript_115831.nic	chr5	+	545	3	ISM	ENSG00000113658.18	ENST00000545279.6	7013	8	-46	28836	-46	-105	5prime_fragment	FALSE	canonical	3	98	junction_1	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGCCATGGAGGAACTGG	NA	False	NA	NA	False	AAAAAG	-6	NA	136132798	136153897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136132963_136147831_136147907_136153591
transcript_115834.known	chr5	-	1816	2	FSM	ENSG00000164621.5	ENST00000297163.3	1816	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTGTGTTATTCTTTA	NA	False	NA	NA	False	AATAAA	-21	NA	136134890	136129506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_136129782_136133349
transcript_115835.known	chr5	+	669	2	FSM	ENSG00000113658.18	ENST00000507118.5	669	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGTGGAGAGTCCAGG	136129892	True	NA	NA	False	AAAAAG	-27	NA	136132846	136154144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136153591
transcript_115837.known	chr5	+	847	4	FSM	ENSG00000113658.18	ENST00000511116.5	847	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	42.4578222082418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTCTTATTCCTGAGAA	136129892	True	NA	NA	False	NA	NA	NA	136132846	136154163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136132963_136147831_136147907_136152674_136152759_136153591
transcript_115839.nnic	chr5	-	629	3	Antisense	novelGene_ENSG00000213568.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	1	80	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTCCCTTTCTGGTGTC	-136448266	True	NA	-8	True	ATTAAA	-13	NA	136448375	136418247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_136418633_136430875_136431060_136448315
transcript_115848.nic	chr5	+	508	4	NIC	ENSG00000249803.6	novel	1338	4	NA	NA	11	2	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	17.2111075245674	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGATTTTATTAATGGT	136465897	True	NA	3	True	AATAAA	-15	NA	136466655	136520831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_136466886_136504599_136504694_136520174_136520275_136520747
transcript_115853.known	chr5	+	781	3	FSM	ENSG00000249803.6	ENST00000660537.1	781	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	29.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465942	True	NA	27	True	AATAAA	-39	NA	136466700	136521145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136520174_136520275_136520649
transcript_115857.known	chr5	+	688	3	FSM	ENSG00000249803.6	ENST00000657590.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	6.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465937	True	NA	27	True	AATAAA	-39	NA	136466695	136521145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136520174_136520275_136520747
transcript_115861.known	chr5	+	1280	3	FSM	ENSG00000249803.6	ENST00000511165.6	1280	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGTGTGTTGTTCACA	136465918	True	NA	NA	False	AATAAA	-29	NA	136466676	136509632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136504599_136504694_136508655
transcript_115863.known	chr5	+	1561	3	FSM	ENSG00000249803.6	ENST00000446720.3	1561	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTTAACTGTAGTGTTCA	136465918	True	NA	NA	False	ATTAAA	-21	NA	136466676	136521432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136504599_136504694_136520174
transcript_115869.known	chr5	+	1180	2	FSM	ENSG00000249803.6	ENST00000665110.1	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATGTGGATTTTTGAG	136465918	True	NA	27	True	AATAAA	-39	NA	136466676	136521145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136520174
transcript_11587.nnic	chr1	+	1260	4	NNC	ENSG00000160785.14	novel	3467	4	NA	NA	-5	-1918	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	86.7448365418177	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTGGAATGCTTCTCAC	156190008	True	NA	NA	False	AATAAA	-31	NA	156194097	156208509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_156194248_156199834_156200473_156207885_156208014_156208165
transcript_115872.nic	chr5	+	434	2	ISM	ENSG00000249803.6	ENST00000511165.6	1280	3	-21	4829	11	2	5prime_fragment	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTATGTGTCTGGCTTC	136465897	True	NA	NA	False	AATAAA	-18	NA	136466655	136504803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_136466886_136504599
transcript_115873.known	chr5	+	913	2	FSM	ENSG00000249803.6	ENST00000659712.1	913	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTCTATGTGTCTGGCT	136466101	False	NA	NA	False	AATAAA	-16	NA	136466859	136504801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136503914
transcript_115874.known	chr5	+	1186	2	FSM	ENSG00000249803.6	ENST00000666378.1	1186	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATGTGTGTTGTTCACA	136465918	True	NA	NA	False	AATAAA	-29	NA	136466676	136509632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_136466886_136508655
transcript_115878.nnic	chr5	+	928	4	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1338	4	NA	NA	11	-1336	multi-exon	FALSE	canonical	3	6	junction_3	11.4309521329882	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCAGAGGTCTCCTTTC	136465897	True	NA	2	True	AATAAA	-15	NA	136466655	136754795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_136466886_136600742_136600843_136753814_136753977_136754359
transcript_115879.nnic	chr5	+	1748	4	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1338	4	NA	NA	11	-516	multi-exon	FALSE	canonical	3	6	junction_3	11.4309521329882	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCACCTTGCTTACCTA	136465897	True	NA	2	True	ATTAAA	-18	NA	136466655	136755615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_136466886_136600742_136600843_136753814_136753977_136754359
transcript_11588.known	chr1	+	3467	4	FSM	ENSG00000160785.14	ENST00000359511.5	3467	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	15.2825245151302	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGCTTGCGCGTATTT	156190014	True	NA	14	True	ATTAAA	-21	NA	156194103	156212796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156194248_156199834_156200473_156207885_156208014_156210239
transcript_115880.nnic	chr5	+	2278	4	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1338	4	NA	NA	11	0	multi-exon	FALSE	canonical	3	6	junction_3	11.4309521329882	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTACAGATATTCTGTTG	136465897	True	NA	-4	True	AATAAA	-6	NA	136466655	136756145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_136466886_136600742_136600843_136753814_136753977_136754359
transcript_115884.nnic	chr5	+	764	3	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1280	3	NA	NA	11	-1338	multi-exon	FALSE	canonical	1	3	junction_2	14.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGCCAGAGGTCTCCTT	136465897	True	NA	0	True	AATAAA	-13	NA	136466655	136754793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_136466886_136600742_136600843_136754359
transcript_115885.nnic	chr5	+	1588	3	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1280	3	NA	NA	11	-514	multi-exon	FALSE	canonical	1	3	junction_2	14.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACCTTGCTTACCTATC	136465897	True	NA	4	True	ATTAAA	-20	NA	136466655	136755617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_136466886_136600742_136600843_136754359
transcript_115886.nnic	chr5	+	893	3	Fusion	ENSG00000249803.6_ENSG00000250284.3	novel	1280	3	NA	NA	11	95	multi-exon	FALSE	canonical	1	3	junction_2	14.5	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAACTAGATGACCTG	136465897	True	NA	4	True	TATAAA	-20	NA	136466655	136763504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_+_136466886_136600742_136600843_136762941
transcript_115887.known	chr5	-	6805	15	FSM	ENSG00000146021.15	ENST00000309755.9	6805	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	8.06858356939597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCTCAGTATTTCATTT	-137736014	True	NA	-10	True	AATAAA	-17	NA	137736089	137617499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_137622127_137625752_137625897_137628296_137628438_137634036_137634166_137637293_137637396_137638952_137639151_137639859_137639978_137658130_137658281_137661914_137662032_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_115888.nnic	chr5	-	1422	7	NNC	ENSG00000146021.15	novel	423	4	NA	NA	13	328	intron_retention	FALSE	canonical	2	4	junction_1	11.513277359447	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCATGACTGCTA	-137736001	False	NA	NA	False	AATAAA	-15	NA	137736076	137677088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_137677445_137677544_137677655_137692284_137692448_137698286_137698409_137709749_137709857_137720464_137720585_137735632
transcript_115893.known	chr5	-	4275	3	FSM	ENSG00000250159.7	ENST00000508281.3	4275	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	NA	False	NA	NA	False	NA	NA	NA	137889394	137879723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_137883622_137888159_137888289_137889146
transcript_115898.known	chr5	-	1208	6	FSM	ENSG00000112981.5	ENST00000265191.4	1208	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.48193472919817	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATAAGTAATTTTTTGG	-138139364	False	NA	NA	False	AATAAA	-17	NA	138139428	138115174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138786_138139370
transcript_115899.nic	chr5	-	793	6	NIC	ENSG00000112981.5	novel	1208	6	NA	NA	2	-3	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	3.00665927567458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTGTTAAAGGAATAACT	-138139362	True	NA	NA	False	AATAAA	-16	NA	138139426	138115555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138115765_138118817_138118937_138128478_138128580_138129262_138129469_138138651_138138754_138139370
transcript_1159.nic	chr1	-	536	3	ISM	ENSG00000116151.14	ENST00000378529.7	1500	11	120	32829	-33	0	5prime_fragment	FALSE	canonical	3	20	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATTTCTTTTTTATTTA	-2391494	False	NA	0	True	AATAAA	-21	NA	2391587	2388003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_2388338_2389924_2389997_2391457
transcript_115910.known	chr5	-	3198	22	FSM	ENSG00000112983.18	ENST00000230901.9	3198	22	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	151.850057323983	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138168678	True	NA	0	True	AATAAA	-19	NA	138178630	138156881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_115913.known	chr5	-	2982	21	FSM	ENSG00000112983.18	ENST00000402931.5	2982	21	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_12	153.341930012636	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138168681	True	NA	0	True	AATAAA	-19	NA	138178633	138156881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138159554_138159600_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166728_138167933_138168079_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_115917.known	chr5	-	3005	21	FSM	ENSG00000112983.18	ENST00000454473.5	3005	21	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_11	176.352055559327	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138178296	False	NA	0	True	AATAAA	-19	NA	138178599	138156881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138166517_138166611_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_115926.known	chr5	-	2967	20	FSM	ENSG00000112983.18	ENST00000411594.6	2967	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_10	173.161014209623	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAACTAGCCTTTG	-138178366	False	NA	-15	True	AATAAA	-4	NA	138178669	138156896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138160068_138160174_138160890_138161069_138161795_138161865_138162053_138162147_138163129_138163345_138164086_138164134_138164319_138164414_138164713_138165167_138165827_138166109_138167933_138168079_138168469_138168689_138169221_138169359_138170344_138170410_138170831_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_115928.known	chr5	+	3095	19	FSM	ENSG00000112984.12	ENST00000394894.8	3095	19	0	0	0	0	multi-exon	TRUE	canonical	3	408	junction_9	40.8032390992143	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGAATCAAACATCATTC	138172471	True	NA	76	True	ATTAAA	-26	NA	138179111	138187723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138179203_138179659_138179846_138181421_138181512_138181608_138181729_138182322_138182462_138182585_138182774_138182860_138182991_138183168_138183364_138183469_138183582_138183687_138183757_138183961_138184106_138184238_138184405_138184511_138184677_138184806_138184947_138185094_138185198_138185511_138185711_138185960_138186053_138186293_138186432_138187095
transcript_115944.known	chr5	-	3133	16	FSM	ENSG00000094880.11	ENST00000394886.7	3133	16	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_13	44.1935138529023	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTAATATAACTGTTT	-138207009	True	NA	51	True	AATAAA	-16	NA	138213323	138187649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138189149_138189632_138189753_138189827_138189907_138191473_138191536_138191861_138191938_138192268_138192389_138192503_138192658_138198198_138198281_138198425_138198524_138198604_138198783_138201106_138201240_138201342_138201449_138202112_138202156_138206546_138206685_138212990_138213064_138213151
transcript_115953.known	chr5	-	557	6	FSM	ENSG00000112983.18	ENST00000515254.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_5	73.4302390027433	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGATTCTGGAAGGGGA	-138168677	True	NA	NA	False	NA	NA	NA	138178629	138170729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138170913_138171037_138171161_138171360_138171411_138172064_138172135_138177570_138177668_138178595
transcript_115954.known	chr5	-	455	3	FSM	ENSG00000094880.11	ENST00000505120.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	216	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATAGCTTAGCAGTGGG	-138207009	True	NA	NA	False	NA	NA	NA	138213323	138206470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138206681_138212990_138213064_138213151
transcript_115958.known	chr5	-	745	4	FSM	ENSG00000112983.18	ENST00000472478.6	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	185.172592164415	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGCTTGTTCTGTGTGT	-138160119	False	NA	0	True	AATAAA	-19	NA	138160129	138156881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138157268_138157641_138157895_138159554_138159600_138160068
transcript_115959.known	chr5	-	1988	8	FSM	ENSG00000146013.11	ENST00000274721.8	1988	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.24264068711928	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGCTCTTTTTCCATT	-138274479	True	NA	-25	True	ATTAAA	-13	NA	138274621	138252379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138253058_138253286_138253376_138253765_138253901_138254056_138254161_138257638_138257952_138259556_138259650_138264260_138264549_138274333
transcript_11596.known	chr1	+	837	6	FSM	ENSG00000160783.19	ENST00000497069.2	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	537.73316803039	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGGAATTTGCTGGAGG	156200121	True	NA	NA	False	NA	NA	NA	156213025	156239718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156225556_156225669_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_115960.nic	chr5	-	2133	14	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	21	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_13	39.8063359114881	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329500	True	NA	-12	True	AATAAA	-16	NA	138331848	138285268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331215_138331594
transcript_115961.known	chr5	-	2093	14	FSM	ENSG00000158402.21	ENST00000323760.11	2093	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	40.3722325338012	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329456	True	NA	-12	True	AATAAA	-16	NA	138331804	138285268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138325814_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_115981.known	chr5	-	1556	11	FSM	ENSG00000158402.21	ENST00000415130.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	62.7573900030905	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTACCAACTTGTATCC	-138329446	True	NA	-1	True	ATTAAA	-20	NA	138331794	138285572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331215_138331594
transcript_115982.nic	chr5	-	1914	11	NIC	ENSG00000158402.21	novel	2093	14	NA	NA	25	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_8	63.1728580958627	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATTGTGAGCCTAGC	-138329496	True	NA	-12	True	AATAAA	-16	NA	138331844	138285268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_138285842_138286021_138286134_138286496_138286631_138287168_138287268_138289500_138289564_138290638_138290741_138291969_138292117_138319218_138319375_138328483_138328530_138330986_138331219_138331594
transcript_115994.nic	chr5	-	747	6	ISM	ENSG00000158402.21	ENST00000323760.11	2093	14	-40	40546	25	0	5prime_fragment	FALSE	canonical	3	110	junction_5	10.9471457467232	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGTTTAATGGAAACC	-138329496	True	NA	-23	True	AATAAA	-7	NA	138331844	138325814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_138325905_138326020_138326055_138328483_138328530_138329552_138329648_138330986_138331219_138331594
transcript_1160.nic	chr1	-	436	2	ISM	ENSG00000116151.14	ENST00000378525.2	1648	7	117	9944	0	5	5prime_fragment	FALSE	canonical	3	21	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTTATTTAAAGCT	-2391461	False	NA	5	True	AATAAA	-26	NA	2391554	2387998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_2388338_2391457
transcript_116001.known	chr5	+	4143	5	FSM	ENSG00000120709.11	ENST00000239906.10	4143	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	18.7683243791235	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTGTACTACAGTGTCT	138333204	True	NA	28	True	AATAAA	-33	NA	138338265	138349729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138338308_138341183_138341414_138341808_138341867_138344824_138345610_138346701
transcript_116005.known	chr5	+	551	4	FSM	ENSG00000120709.11	ENST00000511595.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	3.2659863237109	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCTCCTTTATCCAC	138331380	True	NA	NA	False	AATAGA	-44	NA	138332104	138337146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138332186_138333432_138333529_138335384_138335486_138336873
transcript_116009.nnic	chr5	+	473	4	NNC	ENSG00000120709.11	novel	551	4	NA	NA	-35	217	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	5.43650214343336	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGAAATATAGCGCCGTCA	138331345	True	NA	NA	False	AATAAA	-22	NA	138332069	138337363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_138332186_138333432_138333529_138335384_138335486_138337203
transcript_116010.nnic	chr5	+	744	4	NNC	ENSG00000120709.11	novel	551	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.12825877028341	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCCTCTCCTTTATCCAC	138331351	True	NA	NA	False	AATAGA	-44	NA	138332075	138337146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_138332350_138333432_138333529_138335384_138335486_138336873
transcript_116018.nic	chr5	+	1685	3	ISM	ENSG00000120709.11	ENST00000513056.5	923	5	-184	4043	67	14	5prime_fragment	FALSE	canonical	3	65	junction_1	14.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAACAAAAAAAACTTT	138337702	True	NA	NA	False	NA	NA	NA	138338081	138343037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_138338308_138341183_138341414_138341808
transcript_116021.nic	chr5	+	1420	2	ISM	ENSG00000120709.11	ENST00000505768.1	772	3	101	2209	101	13	5prime_fragment	FALSE	canonical	2	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAAAAACAAAAAAAACTT	138337736	False	NA	NA	False	NA	NA	NA	138338115	138343036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_138338308_138341808
transcript_116022.known	chr5	+	1882	2	FSM	ENSG00000120709.11	ENST00000511024.5	1882	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAACAAAAA	138333204	True	NA	NA	False	NA	NA	NA	138338265	138343023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138338308_138341183
transcript_116023.known	chr5	+	2131	8	FSM	ENSG00000132563.17	ENST00000378339.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_5	33.6906696948843	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTTGGCCTCTGTGCT	138436975	True	NA	14	True	AATAAA	-19	NA	138439056	138446965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138439241_138441015_138441089_138441384_138441462_138444414_138444536_138444753_138444868_138445227_138445376_138445467_138445599_138445682
transcript_116024.known	chr5	+	3137	2	FSM	ENSG00000120738.8	ENST00000239938.5	3137	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCGATTGGGTATGTGTT	138462919	True	NA	8	True	AATAAA	-4	NA	138465478	138469303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138466069_138466756
transcript_116028.known	chr5	-	3874	11	FSM	ENSG00000120705.13	ENST00000499810.6	3874	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	226.079720452764	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-138528695	True	NA	NA	False	ATTAAA	-16	NA	138543229	138506094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542633_138542937_138543096
transcript_11603.known	chr1	+	884	5	FSM	ENSG00000160783.19	ENST00000368273.8	884	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	533.96927580152	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCTCTAGGTTCAG	156200101	True	NA	NA	False	NA	NA	NA	156213005	156239851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156225556_156225669_156233627_156233729_156236287_156236484_156239547
transcript_116030.known	chr5	-	3682	11	FSM	ENSG00000120705.13	ENST00000360541.10	3682	11	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_10	73.5918473745564	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTGTGTGCTTGAGATT	-138528702	True	NA	NA	False	ATTAAA	-16	NA	138543236	138506094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138508388_138508668_138508817_138510564_138510630_138511044_138511201_138511474_138511605_138512763_138512955_138513567_138513707_138517560_138517701_138518691_138518868_138542832_138542937_138543096
transcript_116044.known	chr5	-	4449	17	FSM	ENSG00000113013.16	ENST00000677988.1	4449	17	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_16	677.076239706431	725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533511	True	NA	NA	False	CATAAA	-25	NA	138575403	138553755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574170_138575237
transcript_116045.known	chr5	-	4345	16	FSM	ENSG00000113013.16	ENST00000677527.1	4345	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	719.88553411096	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGATTGGTTTTATTCT	-138533509	True	NA	NA	False	CATAAA	-25	NA	138575401	138553755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138575237
transcript_116048.known	chr5	-	7459	12	FSM	ENSG00000113013.16	ENST00000649692.2	7459	12	0	0	0	0	multi-exon	FALSE	canonical	3	2755	junction_8	91.5952288627155	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTATTTCTGCTTTTCTG	-138533529	True	NA	-6	True	AATAAA	-18	NA	138575421	138554887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556115_138556451_138556593_138556773_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_116049.known	chr5	-	2120	16	FSM	ENSG00000113013.16	ENST00000507115.6	2120	16	0	0	0	0	multi-exon	FALSE	canonical	3	2643	junction_4	115.629292713107	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGTTCTTGATGACTGTC	-138533539	True	NA	51	True	NA	NA	NA	138575431	138556406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138556593_138556773_138556867_138557401_138557497_138557868_138557987_138558552_138558658_138559863_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_116050.known	chr5	-	2272	11	FSM	ENSG00000113013.16	ENST00000508003.2	2272	11	0	0	0	0	multi-exon	FALSE	canonical	3	2657	junction_1	116.448314715156	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCCTGACTTACCCAA	-138533527	True	NA	NA	False	NA	NA	NA	138575419	138559102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138560092_138561579_138561790_138566625_138566719_138567000_138567164_138567454_138567562_138567648_138567723_138568924_138569050_138570959_138571142_138573762_138573851_138574067_138574127_138575237
transcript_116051.known	chr5	+	3754	18	FSM	ENSG00000044115.21	ENST00000302763.12	3754	18	0	0	0	0	multi-exon	TRUE	canonical	3	1423	junction_3	126.776538276763	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGAGCCCAAAGTCGTC	138732298	True	NA	28	True	AATAAA	-22	NA	138753424	138935034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138753511_138781922_138782030_138783176_138783373_138810037_138810205_138812182_138812303_138824529_138824800_138827514_138827719_138886211_138886293_138887489_138887643_138904348_138904442_138917741_138917899_138924509_138924711_138925255_138925408_138929245_138929357_138930472_138930655_138930829_138930936_138932577_138932713_138933801
transcript_11606.known	chr1	+	655	5	FSM	ENSG00000260238.6	ENST00000567140.3	655	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	30.0873727666608	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTCTTTCCTCTTCCCC	156200104	True	NA	-97	True	NA	NA	NA	156213008	156243214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_116060.known	chr5	+	224	2	FSM	ENSG00000044115.21	ENST00000521941.1	224	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGAGGATTTAAGTCTTA	138732318	True	NA	NA	False	AAGAAA	-23	NA	138753444	138762098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_138753511_138761940
transcript_116061.known	chr5	-	587	2	FSM	ENSG00000253404.1	ENST00000520838.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGTCATCTCAGACCCG	-138753281	True	NA	-13	True	AATAAA	-15	NA	138753309	138744433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138744763_138753051
transcript_116062.known	chr5	-	1895	11	FSM	ENSG00000120725.13	ENST00000265195.9	1895	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	20.6157706622867	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGTGCCATTAAAGGAGAA	-139197204	True	NA	NA	False	NA	NA	NA	139198316	138946753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139196440_139196529_139198268
transcript_116063.known	chr5	-	1889	10	FSM	ENSG00000120725.13	ENST00000394817.7	1889	10	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_9	8.75312995165828	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGCTTCACACTAGTGCT	-139197256	True	NA	NA	False	ATTAAA	-17	NA	139198368	138946723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139121034_139121174_139127738_139127854_139198268
transcript_116066.nnic	chr5	-	1291	8	NNC	ENSG00000120725.13	novel	1889	10	NA	NA	-19309	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	18.3758937031034	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCATCCTCTTTCTGCTG	-139061917	True	NA	-11	True	ATTAAA	-12	NA	139061991	138946994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_138947474_138951170_138951336_138951787_138951885_139021170_139021293_139026800_139026993_139042619_139042720_139050937_139051047_139061964
transcript_116073.nnic	chr5	+	1231	3	NNC	ENSG00000249593.6	novel	1067	3	NA	NA	-1654	213	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	1	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTGTGCTGAGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	139010992	139014437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139011230_139012649_139012787_139013580
transcript_116074.nnic	chr5	+	471	2	NNC	ENSG00000249593.6	novel	803	2	NA	NA	-1552	-703	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAATTGGCTGATATTCA	NA	False	NA	NA	False	AATAAA	-23	NA	139011094	139012985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139011230_139012649
transcript_116079.known	chr5	+	3970	18	FSM	ENSG00000280987.4	ENST00000361059.7	3970	18	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	1060.07183604596	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGGCCATGTTAATTG	139263665	True	NA	5	True	AATAAA	-7	NA	139274102	139330394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_116082.known	chr5	+	2243	17	FSM	ENSG00000280987.4	ENST00000504203.5	2243	17	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	1096.56809630946	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAGAACAAAACCAATAG	139263666	True	NA	-26	True	AAGAAA	-23	NA	139274103	139329757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_116088.known	chr5	+	5069	15	FSM	ENSG00000015479.20	ENST00000394805.8	5069	15	0	0	0	0	multi-exon	FALSE	canonical	3	1576	junction_1	445.291947341682	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTACAGTTCTTTT	139263320	True	NA	9	True	AATGAA	-20	NA	139293739	139331677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293806_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_116093.known	chr5	+	4018	15	FSM	ENSG00000015479.20	ENST00000618441.5	4018	15	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	697.855973094501	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139263358	True	NA	-31	True	NA	NA	NA	139293777	139330441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139294029_139307238_139308328_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_1161.known	chr1	-	568	1	FSM	ENSG00000272420.1	ENST00000607858.1	568	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTTGACCCACATTG	NA	False	NA	41	True	AATAAA	-13	NA	2363628	2363060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2363100_2363600
transcript_116103.nic	chr5	+	2834	14	NIC	ENSG00000015479.20	novel	5069	15	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	234	junction_1	714.832044658748	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTATTTGTCAGTTGTGGTT	139293588	True	NA	-31	True	NA	NA	NA	139293649	139330441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_139293806_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_11612.known	chr1	-	2037	6	FSM	ENSG00000160781.17	ENST00000612424.4	2037	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.04654630231891	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTCTTCTGGAGTTT	-156248077	False	NA	86	True	CATAAA	-23	NA	156248117	156243320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156244404_156244689_156244790_156245141_156245239_156245534_156245662_156245781_156246251_156247956
transcript_11613.known	chr1	-	2277	7	FSM	ENSG00000160781.17	ENST00000335852.6	2277	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.74596669241483	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTCTTCTGGAGTTT	-156248077	False	NA	86	True	CATAAA	-23	NA	156248117	156243320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156244404_156244689_156244912_156245141_156245239_156245534_156245662_156245781_156246251_156246680_156246757_156247914
transcript_116140.nnic	chr5	+	858	7	NNC	ENSG00000281398.4	novel	801	7	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	100.054568444758	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	NA	False	NA	17	True	AATAAA	-14	NA	139274044	139284900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738_139282856_139284591
transcript_116142.nnic	chr5	+	929	7	NNC	ENSG00000281398.4	novel	801	7	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	100.054568444758	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	NA	False	NA	17	True	AATAAA	-14	NA	139274044	139284900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738_139282877_139284541
transcript_116159.nnic	chr5	+	762	6	NNC	ENSG00000281398.4	novel	865	6	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	100.018798233132	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	NA	False	NA	17	True	AATAAA	-14	NA	139274044	139284900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280030_139284541
transcript_116160.known	chr5	+	865	6	FSM	ENSG00000281398.4	ENST00000507197.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	89.376954524083	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTCTGAGTTAGAATCT	139263680	True	NA	NA	False	NA	NA	NA	139274117	139283244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139282738
transcript_116162.nnic	chr5	+	782	6	NNC	ENSG00000281398.4	novel	865	6	NA	NA	-57	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	100.018798233132	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	NA	False	NA	17	True	AATAAA	-14	NA	139274044	139284900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934_139280059_139284550
transcript_116174.known	chr5	+	444	6	FSM	ENSG00000281398.4	ENST00000513259.5	444	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.64407731716	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATAATATTATGCTTGT	139263666	True	NA	NA	False	NA	NA	NA	139274103	139280059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274166_139274363_139274430_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_116184.nnic	chr5	+	553	5	NNC	ENSG00000281398.4	novel	2383	5	NA	NA	-3	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	101.539093456658	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTTTGTCATTAGGGT	139263661	True	NA	17	True	AATAAA	-14	NA	139274098	139284900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279108_139284579
transcript_116185.known	chr5	+	1264	5	FSM	ENSG00000281398.4	ENST00000648842.1	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	75.3537490772689	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCGATTTTTTTTTT	139263664	True	NA	7	True	AATAAA	-17	NA	139274101	139280947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139279934
transcript_116187.known	chr5	+	2383	5	FSM	ENSG00000281398.4	ENST00000505522.6	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	89.9704812702477	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATTTTTTGTCATTAGGG	139263693	True	NA	16	True	AATAAA	-13	NA	139274130	139284899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139282738
transcript_116190.nnic	chr5	+	437	5	NNC	ENSG00000281398.4	novel	542	5	NA	NA	-57	6244	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	100.708428147797	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCAGTTTCCCAAAGTC	NA	False	NA	6	True	AATAAA	-15	NA	139274044	139291143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050_139279130_139291014
transcript_116208.known	chr5	+	679	4	FSM	ENSG00000281398.4	ENST00000514110.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	33.0252428706689	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCTCCTGGGTTCAAGC	139263693	True	NA	NA	False	NA	NA	NA	139274130	139279586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139274162_139276120_139276151_139278326_139278409_139279050
transcript_116218.known	chr5	+	575	7	FSM	ENSG00000015479.20	ENST00000512876.5	575	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	903.76706991717	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCCAGTGAGAGTTCATT	139263254	True	NA	NA	False	NA	NA	NA	139293673	139318987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293773_139314674_139314737_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907
transcript_116219.known	chr5	+	2664	13	FSM	ENSG00000015479.20	ENST00000502499.5	2664	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	799.919561928295	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTGGTTATACATGT	139263302	True	NA	16	True	AATAAA	-18	NA	139293721	139330405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139293806_139315696_139315739_139316075_139316189_139317052_139317106_139317595_139317722_139318907_139319034_139319333_139319502_139321897_139322030_139322462_139322507_139322597_139322968_139325439_139325663_139326162_139326285_139329344
transcript_11622.known	chr1	-	1961	5	FSM	ENSG00000160781.17	ENST00000623241.3	1961	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.62807315119618	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTCCTCTTCTGGAGTTT	-156248077	False	NA	86	True	CATAAA	-23	NA	156248117	156243320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156244404_156244760_156244912_156245141_156245239_156245781_156246251_156247956
transcript_116236.known	chr5	+	1456	4	FSM	ENSG00000120727.13	ENST00000265192.9	1456	4	0	0	0	0	multi-exon	FALSE	canonical	3	3644	junction_3	239.708619415786	20555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGATGGTTGTGTTTATTG	139310187	True	NA	12	True	AATAAA	-16	NA	139341853	139369717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139341981_139363758_139363923_139364563_139364744_139368732
transcript_116237.known	chr5	+	815	3	FSM	ENSG00000120727.13	ENST00000510409.1	815	3	0	0	0	0	multi-exon	FALSE	canonical	3	3803	junction_2	205	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGATTGCACCATTGCAC	139310190	True	NA	NA	False	NA	NA	NA	139341856	139365090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139341981_139363758_139363923_139364563
transcript_116238.known	chr5	+	468	3	FSM	ENSG00000120727.13	ENST00000511706.5	468	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2105	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTAATAAAAGTGCTGAGA	139310211	True	NA	NA	False	NA	NA	NA	139341877	139368933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139341981_139363758_139363923_139368732
transcript_116239.known	chr5	-	925	4	FSM	ENSG00000170476.16	ENST00000302125.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTTTTGAGACAGT	-139389821	False	NA	NA	False	NA	NA	NA	139389913	139387466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139387922_139388020_139388132_139388460_139388586_139389679
transcript_116240.known	chr5	-	1887	3	FSM	ENSG00000170476.16	ENST00000503120.5	1887	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTCTTTTCTCTGCAAAAG	-139389791	False	NA	-1	True	AATAAA	-14	NA	139389883	139387568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139387922_139388020_139388132_139388460
transcript_116241.known	chr5	-	839	2	FSM	ENSG00000170476.16	ENST00000511979.1	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTCAAATAAAACCCAGT	-139388670	False	NA	-27	True	NA	NA	NA	139388762	139387594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139388132_139388460
transcript_116244.known	chr5	-	680	6	FSM	ENSG00000170469.11	ENST00000450845.7	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	17.6136310850432	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCTCTGCCTTCTC	-139403296	True	NA	-5	True	AATAAA	-33	NA	139404089	139396766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139396930_139397040_139397144_139401754_139401826_139401914_139402046_139402627_139402694_139403943
transcript_116245.known	chr5	-	606	4	FSM	ENSG00000170469.11	ENST00000507779.2	606	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.6847772609735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCCCATTTTTCCTGAA	-139403267	True	NA	-24	True	CATAAA	-10	NA	139404060	139401524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139401817_139401914_139402046_139402627_139402694_139403943
transcript_116246.known	chr5	-	484	5	FSM	ENSG00000170469.11	ENST00000512761.5	484	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.2752665528384	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGTAATCCCCAGCC	-139401870	False	NA	-16	True	AATAAA	-22	NA	139402663	139396777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139396930_139397040_139397144_139401754_139401817_139401914_139402046_139402627
transcript_116252.known	chr5	-	5102	8	FSM	ENSG00000170464.10	ENST00000302060.10	5102	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.2557774797298	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTACTTTTCCTTGGTTC	-139437108	True	NA	NA	False	ATTAAA	-20	NA	139439525	139410202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139414273_139420052_139420226_139422707_139422818_139425004_139425115_139426171_139426358_139428537_139428684_139437371_139437559_139439405
transcript_11626.known	chr1	+	1007	7	FSM	ENSG00000260238.6	ENST00000490491.5	1007	7	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_6	533.269918104852	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTCCAGTTTATGGAGT	156200077	True	NA	21	True	AATAAA	-30	NA	156212981	156243332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156242552_156242592_156242761_156242832_156243032
transcript_116264.known	chr5	-	1031	10	FSM	ENSG00000249751.4	ENST00000618155.3	1031	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	4.36597393430856	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAATTACTTTTAAGGTC	-139462400	True	NA	-14	True	ATTAAA	-19	NA	139462743	139448559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139448909_139449077_139449175_139454601_139454639_139454824_139454924_139455322_139455437_139456473_139456519_139457544_139457605_139457756_139457808_139458138_139458184_139462609
transcript_116265.known	chr5	-	432	4	FSM	ENSG00000170464.10	ENST00000514052.1	432	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	70.5423434698779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTAGCTCTTCAGTCA	NA	False	NA	NA	False	ATTAAA	-18	NA	139425048	139419067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_139419173_139420052_139420226_139422707_139422818_139425004
transcript_116266.known	chr5	+	2087	2	FSM	ENSG00000286403.1	ENST00000657350.1	2087	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTGTTTTTTGTTTTTTT	139503132	True	NA	NA	False	NA	NA	NA	139503241	139511374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139503814_139509859
transcript_11627.known	chr1	+	1068	5	FSM	ENSG00000160783.19	ENST00000368277.3	1068	5	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_3	45.18849411078	4086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGAGCATGCTTCCTCT	156200102	True	NA	42	True	AATAAA	-21	NA	156213006	156240042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236287_156236484_156239547
transcript_116273.known	chr5	+	656	7	FSM	ENSG00000131508.16	ENST00000511725.5	656	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	897.533471984936	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCCTTTTGATTTCCA	139526412	False	NA	26	True	AATAAA	-21	NA	139526430	139626855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139526613_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_116274.known	chr5	+	2530	7	FSM	ENSG00000131508.16	ENST00000398733.8	2530	7	0	0	0	0	multi-exon	FALSE	canonical	3	2007	junction_1	243.165752797003	2807	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCACCTTGTCTTATC	139538798	True	NA	7	True	AATAAA	-24	NA	139561338	139628434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755
transcript_116276.known	chr5	+	901	8	FSM	ENSG00000131508.16	ENST00000398734.8	901	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	831.177379826168	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATTTTGTGTGAATAG	139558529	False	NA	NA	False	AATAAA	-21	NA	139561725	139627686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139561816_139600371_139600436_139614585_139614618_139614696_139614775_139614860_139614967_139623367_139623462_139626755_139627058_139627551
transcript_11628.known	chr1	+	1019	5	FSM	ENSG00000160783.19	ENST00000368279.7	1019	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	457.978984233993	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGAGCATGCTTCCT	156200088	True	NA	40	True	AATAAA	-19	NA	156212992	156240040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156239547
transcript_116280.known	chr5	+	2601	3	FSM	ENSG00000171604.12	ENST00000302517.8	2601	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	89	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTGGCTTCTTGCTC	139644574	True	NA	34	True	AATAAA	-25	NA	139648348	139683882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139648846_139680363_139681448_139682862
transcript_116282.known	chr5	+	1892	3	FSM	ENSG00000171604.12	ENST00000511048.1	1892	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	336	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTCGTTTATCCATT	139647168	True	NA	NA	False	AATGAA	-2	NA	139648932	139683593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_139649010_139680363_139681448_139682862
transcript_11629.known	chr1	+	852	7	FSM	ENSG00000260238.6	ENST00000368276.8	852	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_6	515.658290171139	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTGGGGTCCCCATCAT	156200102	True	NA	-48	True	NA	NA	NA	156213006	156243263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156236348_156236484_156242552_156242592_156242761_156242832_156243032
transcript_116291.known	chr5	+	665	4	FSM	ENSG00000120306.11	ENST00000509589.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.61846375863	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGCCATGTTTT	140172255	True	NA	NA	False	GATAAA	-26	NA	140175155	140244810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140175286_140194445_140194653_140243304_140243464_140244641
transcript_116293.known	chr5	+	462	3	FSM	ENSG00000120306.11	ENST00000644078.1	462	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	234.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTCTTTCTTTGACA	140172316	True	NA	NA	False	AATAAA	-23	NA	140175216	140228915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140175286_140194445_140194653_140228729
transcript_116294.known	chr5	+	790	3	FSM	ENSG00000120306.11	ENST00000261811.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_1	38	2558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	140172287	True	NA	6	True	AATAAA	-17	NA	140175187	140243789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140175286_140194445_140194653_140243304
transcript_11630.known	chr1	+	773	6	FSM	ENSG00000260238.6	ENST00000320139.5	773	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	550.46947235973	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGTGAGTCTGTCCA	156200104	True	NA	10	True	AATAAA	-19	NA	156213008	156243321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156213177_156232319_156232426_156233627_156233729_156242552_156242592_156242761_156242832_156243032
transcript_116300.nic	chr5	+	683	2	ISM	ENSG00000120306.11	ENST00000509789.2	813	3	-100	38263	-68	0	5prime_fragment	FALSE	canonical	2	20	junction_1	0	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTGTCTAAATGATTCC	140172187	True	NA	6	True	AATAAA	-17	NA	140175087	140243789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_140175286_140243304
transcript_116302.known	chr5	-	1091	3	FSM	ENSG00000113068.10	ENST00000510217.1	1091	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	310.5	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATTTGCAAATTATGTT	-140295757	True	NA	-76	True	NA	NA	NA	140303113	140245124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140246058_140281448_140281534_140303040
transcript_116305.known	chr5	-	1336	4	FSM	ENSG00000113068.10	ENST00000261813.9	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_3	46.0241482509152	2893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCACTGACTGTGATCTG	-140295745	True	NA	14	True	NA	NA	NA	140303101	140245034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140246058_140281448_140281534_140300415_140300583_140303040
transcript_116306.known	chr5	-	2358	6	FSM	ENSG00000113070.8	ENST00000230990.7	2358	6	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	2.78567765543682	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGTCTGTTTGTTTT	-140346253	True	NA	0	True	AATAAA	-19	NA	140346603	140332842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140334281_140334657_140334749_140335871_140336028_140342634_140342813_140345910_140346085_140346282
transcript_116308.known	chr5	-	549	2	FSM	ENSG00000249637.3	ENST00000507521.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATTGGGAAATTGAATTT	-140401291	False	NA	NA	False	AGTAAA	-23	NA	140401367	140370890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140371183_140401110
transcript_11631.known	chr1	-	4559	22	FSM	ENSG00000198952.8	ENST00000361813.5	4559	22	0	0	0	0	multi-exon	TRUE	canonical	3	430	junction_17	45.6462291026599	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTCTCCTGGTGCCTG	-156271997	True	NA	-15	True	AATAAA	-15	NA	156282825	156249223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156250671_156250857_156250997_156251402_156251478_156252413_156252505_156252918_156253079_156253448_156253509_156259004_156259164_156260450_156260627_156261332_156261409_156263394_156263571_156265780_156266381_156266540_156266679_156267469_156267679_156268114_156268184_156268289_156268416_156272319_156272399_156273360_156273451_156274596_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_116317.known	chr5	-	1328	5	FSM	ENSG00000213523.12	ENST00000336283.9	1328	5	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	143.051345676998	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549044	True	NA	-23	True	NA	NA	NA	140557473	140550067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557273_140557427
transcript_116318.known	chr5	-	978	5	FSM	ENSG00000213523.12	ENST00000520427.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	496.761008936893	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCGGACACCATCTCCTAT	-140557665	False	NA	NA	False	NA	NA	NA	140557677	140550681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146_140557333_140557427
transcript_11632.nic	chr1	-	1588	5	ISM	ENSG00000198952.8	ENST00000361813.5	4559	22	-19	24493	-19	-7580	5prime_fragment	FALSE	canonical	3	512	junction_2	22.2878890880227	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAACAAAAAAAGAAG	-156272016	True	NA	NA	False	AAAAAG	-2	NA	156282844	156273716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_156274687_156277084_156277242_156277924_156278049_156278935_156279035_156282606
transcript_116328.known	chr5	+	693	3	FSM	ENSG00000243056.2	ENST00000310331.3	693	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	28	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTGGCTCCAGTGTTCT	140547182	True	NA	11	True	AGTAAA	-13	NA	140547661	140549576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140547841_140548905_140549077_140549233
transcript_116329.known	chr5	-	769	3	FSM	ENSG00000213523.12	ENST00000602875.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	530	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTTACTCATAACATGC	-140549017	True	NA	-90	True	NA	NA	NA	140557446	140550551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140557146
transcript_116332.known	chr5	-	1466	4	FSM	ENSG00000213523.12	ENST00000602775.5	1466	4	0	0	0	0	multi-exon	FALSE	canonical	3	1109	junction_2	42.9495828462474	544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTTTCAGTGTGAAC	-140549027	True	NA	-23	True	NA	NA	NA	140557456	140550067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140550912_140551060_140551170_140551981_140552185_140557146
transcript_116334.known	chr5	+	2666	3	FSM	ENSG00000176087.16	ENST00000323146.8	2666	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	156.5	201	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTCTTGTGTCTTCTG	140560068	True	NA	19	True	AATAAA	-40	NA	140564827	140569100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140564859_140565872_140565972_140566564
transcript_116335.known	chr5	-	454	4	FSM	ENSG00000283602.1	ENST00000637576.1	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTTCAAATCTGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	140593741	140575709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140575880_140590874_140590992_140592023_140592102_140593652
transcript_116337.known	chr5	+	1834	12	FSM	ENSG00000113119.13	ENST00000252100.6	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	30.1736023867177	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTCAGTGGTTGCAC	140637015	True	NA	23	True	AATAAA	-23	NA	140639503	140645408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140639613_140639738_140639852_140641664_140641781_140641869_140642054_140642314_140642420_140642585_140642672_140642906_140643042_140643563_140643676_140643779_140643967_140644099_140644195_140644572_140644741_140644984
transcript_116357.known	chr5	+	1905	20	FSM	ENSG00000113141.19	ENST00000417647.7	1905	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	661	junction_7	84.1833179729259	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTGTTGAGCATGTC	140636436	True	NA	23	True	ATTAAA	-17	NA	140647828	140662480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828_140655993_140657553_140657663_140658736_140658777_140658938_140659165_140659314_140659334_140659755_140659835_140660114_140660196_140660757_140660816_140661619_140661709_140661898_140662008_140662178_140662214_140662301
transcript_116358.known	chr5	-	649	3	FSM	ENSG00000131495.9	ENST00000252102.9	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	10388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTTGGTCCTCCTGCCT	-140631957	True	NA	65	True	NA	NA	NA	140647630	140645284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140645679_140647255_140647363_140647482
transcript_116359.known	chr5	-	627	3	FSM	ENSG00000131495.9	ENST00000512088.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	878	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTACCAGCTGCTGAAGC	-140631972	True	NA	-19	True	AATAAA	-21	NA	140647645	140645368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140645726_140647255_140647363_140647482
transcript_116360.known	chr5	-	721	2	FSM	ENSG00000131495.9	ENST00000502960.1	721	2	0	0	0	0	multi-exon	FALSE	canonical	3	1856	junction_1	0	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTCAGGGTGTTCTTGT	-140632098	True	NA	-6	True	CATAAA	-18	NA	140647771	140645473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140645679_140647255
transcript_116361.known	chr5	+	868	9	FSM	ENSG00000113141.19	ENST00000508301.5	868	9	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_7	57.8401623009479	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAATGGAATCCTGA	140636449	True	NA	NA	False	NA	NA	NA	140647841	140655992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140647925_140648470_140648538_140651713_140651807_140652087_140652148_140652976_140653145_140653937_140654053_140654515_140654587_140654680_140654728_140655828
transcript_116363.known	chr5	+	2363	15	FSM	ENSG00000112855.17	ENST00000645065.1	2363	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	69.460016394693	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATAACATGTTAAATA	140689821	True	NA	-22	True	NA	NA	NA	140691452	140699271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691516_140691606_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116364.known	chr5	+	2292	14	FSM	ENSG00000112855.17	ENST00000645749.1	2292	14	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	41.6775449310452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCATACCGTGCCATGGA	140689838	True	NA	-58	True	NA	NA	NA	140691469	140699235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691516_140691606_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116365.known	chr5	+	2485	14	FSM	ENSG00000112855.17	ENST00000643996.1	2485	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	71.4679553300167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCATACCGTGCCATGG	140689820	True	NA	-59	True	NA	NA	NA	140691451	140699234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691516_140691791_140692018_140693490_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116366.known	chr5	+	2436	14	FSM	ENSG00000112855.17	ENST00000642970.1	2436	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	71.2958665822639	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689823	True	NA	-2	True	NA	NA	NA	140691454	140699291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691516_140691794_140692018_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116367.known	chr5	+	2468	13	FSM	ENSG00000112855.17	ENST00000230771.9	2468	13	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_7	22.4493256518369	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGGTAATTTGTTA	140689823	True	NA	12	True	AATAAA	-13	NA	140691454	140699305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116373.known	chr5	+	2346	12	FSM	ENSG00000112855.17	ENST00000642752.1	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	57.269841197124	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGTTAAATAAAATATTAA	140689821	True	NA	-13	True	NA	NA	NA	140691452	140699280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691757_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116381.known	chr5	+	3852	7	FSM	ENSG00000120314.19	ENST00000358337.10	3852	7	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	26.7628473821453	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGACTCTAAGATCTTG	140660485	True	NA	22	True	AGTAAA	-19	NA	140664903	140672345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140665104_140668233_140668335_140668414_140668503_140668611_140668792_140668890_140668991_140669078_140669249_140669332
transcript_116385.known	chr5	+	2477	6	FSM	ENSG00000120314.19	ENST00000506393.5	2477	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	63.795297632349	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTGACTCTAAGATCTT	140660449	True	NA	21	True	AGTAAA	-18	NA	140664867	140672344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140665104_140668233_140668503_140668611_140668792_140668890_140669249_140669332_140669691_140671268
transcript_116387.known	chr5	-	1896	13	FSM	ENSG00000170445.16	ENST00000457527.6	1896	13	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_8	131.748155163133	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGTGTGTCAGTGATGC	-140683026	True	NA	-2	True	AATAAA	-18	NA	140691377	140673903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140683099_140683220_140690854_140690945_140691214
transcript_116388.known	chr5	-	1789	12	FSM	ENSG00000170445.16	ENST00000438307.6	1789	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	155.300561695088	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACGGAGTCTGCGTGT	-140682990	True	NA	-13	True	AATAAA	-7	NA	140691341	140673914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140690854_140690945_140691214
transcript_116389.known	chr5	-	1780	12	FSM	ENSG00000170445.16	ENST00000307633.7	1780	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	194.160834753217	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTGCGTGTGTCAGTGAT	-140683032	True	NA	-4	True	AATAAA	-16	NA	140691383	140673905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679061_140679128_140679787_140679884_140690854_140690945_140691214
transcript_116390.known	chr5	-	1229	3	FSM	ENSG00000170445.16	ENST00000502888.2	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	16	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAGACAGAGGTCTTGCTA	-140683002	True	NA	NA	False	AATACA	-3	NA	140691353	140682219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140683220_140690854_140690945_140691214
transcript_116391.known	chr5	+	2469	14	FSM	ENSG00000112855.17	ENST00000646468.1	2469	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	65.9784795468462	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATATTAAGTGTAGTAGTT	140689826	True	NA	-2	True	NA	NA	NA	140691457	140699291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140691757_140693490_140693509_140693590_140693666_140693934_140694055_140694184_140694281_140695507_140695634_140695737_140695846_140696102_140696202_140696520_140696615_140696942_140697071_140697163_140697407_140697568_140697686_140697931_140698079_140698492
transcript_116392.known	chr5	+	735	6	FSM	ENSG00000146007.11	ENST00000506644.3	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	97.0373124112576	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGGTGGGGGCTCATGGT	140694839	True	NA	NA	False	NA	NA	NA	140700463	140705881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140700479_140700818_140700913_140702005_140702130_140703917_140704005_140704425_140704572_140705612
transcript_116393.known	chr5	-	2052	14	FSM	ENSG00000170445.16	ENST00000512396.6	2052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	196.250624692783	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCAACCACGGAGTCTG	-140683016	True	NA	-18	True	AATAAA	-2	NA	140691367	140673919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140679001_140679128_140679787_140679884_140683099_140683220_140683545_140683668_140690854_140690945_140691214
transcript_116394.known	chr5	-	1401	11	FSM	ENSG00000170445.16	ENST00000415192.6	1401	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	157.692866040287	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGCATATGTACTTCAA	-140682990	True	NA	-96	True	NA	NA	NA	140691341	140674200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140674329_140674678_140674826_140675016_140675134_140676653_140676897_140676988_140677117_140677326_140677421_140677654_140677754_140677907_140678016_140683099_140683220_140690854_140690945_140691214
transcript_116395.known	chr5	+	2808	2	FSM	ENSG00000204967.12	ENST00000672575.1	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTGACTTATTACCTCA	140806537	True	NA	NA	False	NA	NA	NA	140807080	140817546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140809573_140817230
transcript_116396.known	chr5	+	2922	1	FSM	ENSG00000204963.6	ENST00000356878.5	2922	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTTCAATTTTGCC	140834162	True	NA	NA	False	TATAAA	-17	NA	140834247	140837169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140834200_140837200
transcript_116397.known	chr5	+	3788	4	FSM	ENSG00000250120.8	ENST00000506939.6	3788	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	75.5836549056004	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTGCCAAGACTTCTGC	140855111	False	NA	55	True	NA	NA	NA	140856009	141011628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_140857648_140978948_140979008_140982474_140982564_141009626
transcript_116398.known	chr5	-	617	2	FSM	ENSG00000278901.1	ENST00000625195.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAATATTAAGTG	-140882596	False	NA	NA	False	TATAAA	-10	NA	140882642	140878072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_140878100_140882052
transcript_116399.known	chr5	+	3355	1	FSM	ENSG00000113205.5	ENST00000231130.3	3355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGTTCTTTTCCATTT	141099836	True	NA	NA	False	ATTAAA	-19	NA	141100472	141103827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141100500_141103800
transcript_116400.known	chr5	+	1963	2	FSM	ENSG00000120328.6	ENST00000624949.1	1963	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTCTTGTTTGAGATATTT	141208306	True	NA	NA	False	TATAAA	-15	NA	141208696	141211537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141208943_141209820
transcript_116401.known	chr5	+	3971	1	FSM	ENSG00000113248.6	ENST00000231173.6	3971	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGCCTGTTTCTCTGG	141244667	True	NA	13	True	AATAAA	-15	NA	141245394	141249365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141245400_141249400
transcript_116402.known	chr5	-	603	2	FSM	ENSG00000178913.9	ENST00000624761.2	1508	2	0	905	0	-905	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGGGCGTCATGGAATC	-141306809	True	NA	NA	False	NA	NA	NA	141320781	141319899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141320239_141320517
transcript_116403.nnic	chr5	-	471	2	NNC	ENSG00000178913.9	novel	683	2	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-141306820	True	NA	-2	True	AATAAA	-25	NA	141320792	141318489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_141318686_141320517
transcript_116404.known	chr5	-	2295	1	FSM	ENSG00000178913.9	ENST00000313368.8	2295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1249	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTATCTTGTTCTTTCA	-141306812	True	NA	-2	True	AATAAA	-25	NA	141320784	141318489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141318500_141320800
transcript_116406.nnic	chr5	+	1491	2	NIC	ENSG00000288095.1	novel	1508	3	NA	NA	-94	24	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTGAAATGATCATTTT	141320833	True	NA	NA	False	AATAAA	-15	NA	141320885	141326009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141321104_141324736
transcript_116407.known	chr5	+	3633	1	FSM	ENSG00000253873.6	ENST00000622044.1	3633	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTGGCTATTTTTTTG	141420687	True	NA	NA	False	ATTAAA	-16	NA	141421046	141424679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141421000_141424700
transcript_116408.known	chr5	+	2346	4	FSM	ENSG00000240184.7	ENST00000617641.4	2346	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	122.52981496581	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACGTTTCTGTATAAGCG	141474598	True	NA	26	True	AATAAA	-19	NA	141475979	141512977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141476147_141494806_141494866_141505392_141505482_141510946
transcript_116409.known	chr5	-	1933	15	FSM	ENSG00000171720.10	ENST00000305264.8	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_12	79.3570142727517	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCGCCTTTCTAGGAAT	-141631800	True	NA	-23	True	AATAAA	-21	NA	141636849	141620880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141621538_141625207_141625366_141625684_141625765_141626012_141626072_141626193_141626284_141627892_141627958_141628113_141628188_141628558_141628640_141629172_141629307_141629683_141629740_141629859_141629917_141630043_141630126_141634810_141634954_141636547_141636631_141636735
transcript_116419.known	chr5	+	621	3	FSM	ENSG00000228737.2	ENST00000422040.2	621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACAGTCCCCCCTCTGTTC	141618386	False	NA	NA	False	AATAAA	-15	NA	141618413	141626481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141618490_141625846_141625966_141626055
transcript_116429.known	chr5	-	4319	20	FSM	ENSG00000197948.11	ENST00000435817.7	4319	20	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	30.8784589054689	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCATATGTTCTTCCTC	-141649080	True	NA	-10	True	AATAAA	-19	NA	141651418	141639301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141641564_141641701_141641758_141643000_141643089_141644217_141644439_141644572_141644691_141644858_141644943_141645019_141645149_141645770_141645933_141646086_141646192_141646602_141646723_141647134_141647231_141647397_141647521_141647967_141648097_141648956_141649021_141649171_141649309_141649394_141649537_141649886_141649955_141650358_141650405_141651019_141651118_141651347
transcript_11643.nnic	chr1	-	1444	6	NNC	ENSG00000198715.13	novel	1611	6	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_4	199.372014084224	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291610	True	NA	-1	True	AATAGA	-20	NA	156295686	156292687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294675_156294760_156295525
transcript_116436.known	chr5	+	2154	8	FSM	ENSG00000164620.9	ENST00000444782.5	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	62.2273645429339	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTGCTTCGCATCCTGG	NA	False	NA	11	True	AATAAA	-16	NA	141636949	141641063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141637742_141638169_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_116440.known	chr5	+	1419	7	FSM	ENSG00000164620.9	ENST00000518856.1	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	89.9685130105713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACCATTACAGCTGCTT	141636961	True	NA	1	True	AATAAA	-6	NA	141637441	141641053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_116442.known	chr5	+	1780	6	FSM	ENSG00000164620.9	ENST00000521367.5	1780	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	105.245617485955	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGTGCCCTTTATTCAT	141635584	True	NA	-34	True	NA	NA	NA	141637011	141641018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141637749_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640670
transcript_116444.known	chr5	+	2536	7	FSM	ENSG00000164620.9	ENST00000297164.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	38.0996500421373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGCTTCGCATCCTGGC	141635569	True	NA	12	True	AATAAA	-17	NA	141636996	141641064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141638410_141638794_141638861_141638954_141639022_141639463_141639650_141639919_141640296_141640411_141640446_141640670
transcript_116445.known	chr5	-	5258	33	FSM	ENSG00000120318.16	ENST00000239440.9	5258	33	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_32	36.2988894458219	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCATTCTCATTCATTCA	-141675853	True	NA	-5	True	AATAAA	-17	NA	141682230	141653401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_141654436_141655361_141655401_141655620_141655759_141655868_141655933_141656063_141656100_141656193_141656277_141656503_141656638_141656717_141656847_141658364_141658480_141658578_141658654_141659407_141659477_141659778_141659927_141661683_141661790_141662042_141662256_141664921_141665086_141665310_141665375_141666423_141666644_141669708_141669812_141669921_141670064_141670511_141670629_141671264_141671401_141671569_141671753_141671894_141671981_141672101_141672302_141672551_141672659_141672740_141672926_141673012_141673134_141673400_141673471_141673604_141673809_141679544_141679657_141679760_141679823_141679962_141680504_141682172
transcript_116447.nnic	chr5	-	1418	3	NNC	ENSG00000156453.14	novel	4814	5	NA	NA	8026	18	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	27	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTCTTGTTGATGTCGTG	-141858076	True	NA	-4	True	NA	NA	NA	141858176	141853354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_141854437_141857251_141857472_141858060
transcript_116450.nnic	chr5	+	2394	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_13	68.6132286656807	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	141917812	True	NA	6	True	AATAAA	-15	NA	141923790	141940146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939505
transcript_116451.nnic	chr5	+	2355	14	NNC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	9	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_13	72.2951707652477	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGCCCTTGAGTATTAT	141917812	True	NA	15	True	AATAAA	-24	NA	141923790	141940155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938851_141938905_141939553
transcript_116452.nic	chr5	+	2390	14	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_12	75.7070811098771	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCATCACTCTTGCCCTT	141917812	True	NA	6	True	AATAAA	-15	NA	141923790	141940146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141938855_141938905_141939505
transcript_116453.nnic	chr5	+	2347	13	NIC	ENSG00000081791.9	novel	2203	13	NA	NA	-64	6	combination_of_known_splicesites	FALSE	canonical	3	38	junction_12	53.9665534279232	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCTTGCCCTTGAGTAT	141917812	True	NA	12	True	AATAAA	-21	NA	141923790	141940152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939505
transcript_116454.known	chr5	+	2203	13	FSM	ENSG00000081791.9	ENST00000194118.8	2203	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	58.9693894227241	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTTTAATAAAACAGATAT	141917876	True	NA	-20	True	NA	NA	NA	141923854	141940120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520_141938761_141939553
transcript_116457.known	chr5	+	4907	12	FSM	ENSG00000081791.9	ENST00000432126.7	4907	12	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_11	25.0543211495435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTCTGATCATGTC	141917892	True	NA	26	True	AATAAA	-19	NA	141923870	141942047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493_141934587_141937197_141937358_141938520
transcript_116462.nic	chr5	+	2197	10	ISM	ENSG00000081791.9	ENST00000194118.8	2203	13	-64	4637	-64	487	5prime_fragment	FALSE	canonical	3	193	junction_9	16.2351546624472	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTACATAGGGGACTG	141917812	True	NA	11	True	ATTAAA	-27	NA	141923790	141935483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258_141933402_141934239_141934399_141934493
transcript_116467.nic	chr5	+	1529	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-119	444	-64	0	5prime_fragment	FALSE	canonical	3	218	junction_6	9.82292196438348	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAGAGTGATCTAAGTCT	141917812	True	NA	11	True	ATTAAA	-25	NA	141923790	141933882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_116468.nic	chr5	+	1825	8	ISM	ENSG00000081791.9	ENST00000508751.1	998	9	-119	148	-64	-148	5prime_fragment	FALSE	canonical	3	218	junction_6	9.82292196438348	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGCAAAAGATGCTTA	141917812	True	NA	NA	False	ATTAAA	-20	NA	141923790	141934178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_141923973_141924580_141924696_141925409_141925528_141928150_141928299_141929581_141929741_141929988_141930075_141930177_141930275_141933258
transcript_116479.known	chr5	+	4170	9	FSM	ENSG00000013561.18	ENST00000394520.7	4170	9	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	25.2830847603689	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTTCATGAAAGCCTT	141967431	True	NA	9	True	AATAAA	-16	NA	141969104	141990292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_116491.known	chr5	+	2905	8	FSM	ENSG00000013561.18	ENST00000394514.6	2905	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	40.7816485339038	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACAGAGTTGCTGCTATT	141967437	True	NA	19	True	AATAAA	-28	NA	141969110	141989185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141969168_141970703_141970878_141973582_141973743_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_116495.known	chr5	+	4213	8	FSM	ENSG00000013561.18	ENST00000347642.7	4213	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	45.4245281219524	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTTAATTTCATGAAAGCC	NA	False	NA	7	True	AATAAA	-14	NA	141968885	141990290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_141969168_141973582_141973743_141974803_141974956_141978302_141978831_141980122_141980352_141983379_141983553_141984802_141984934_141987732
transcript_116526.known	chr5	-	2319	8	FSM	ENSG00000113552.16	ENST00000500692.6	2319	8	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_7	266.40991891812	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATGTCATTTGTGGATT	-142003211	True	NA	-17	True	ATTAAA	-16	NA	142013030	142000673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012287_142012340_142012994
transcript_116532.known	chr5	-	754	7	FSM	ENSG00000113552.16	ENST00000504139.5	754	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	232.675501264935	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATCAAAGAGAAAGAAACTGA	-142003212	True	NA	NA	False	NA	NA	NA	142013031	142002085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142002130_142003087_142003215_142004985_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_116535.known	chr5	-	2267	7	FSM	ENSG00000113552.16	ENST00000311337.11	2267	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	91.5649435585961	1338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCATTTGTGGATTTGA	-142003208	True	NA	-14	True	ATTAAA	-19	NA	142013027	142000670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142002130_142003087_142003263_142004931_142005117_142006143_142006327_142007798_142007901_142011911_142012042_142012994
transcript_11654.known	chr1	-	1364	5	FSM	ENSG00000198715.13	ENST00000622703.4	1364	5	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_4	136.694001331441	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156295525
transcript_116544.known	chr5	+	3574	8	FSM	ENSG00000131507.11	ENST00000253814.6	3574	8	0	0	0	0	multi-exon	TRUE	canonical	3	463	junction_7	33.2000737643636	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATGAATATCTTTACT	142094779	True	NA	NA	False	AATAAA	-34	NA	142108778	142154440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_142109038_142131807_142131896_142132211_142132343_142135729_142135818_142137733_142137859_142140562_142140630_142144570_142144677_142151730
transcript_116554.known	chr5	+	539	3	FSM	ENSG00000231185.8	ENST00000515288.2	691	3	0	152	0	-152	multi-exon	FALSE	canonical	3	7	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTGGGTTTTTATGCTT	142325060	True	NA	NA	False	NA	NA	NA	142325297	142353621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_142325371_142345415_142345486_142353225
transcript_116556.known	chr5	-	4938	3	FSM	ENSG00000187678.10	ENST00000344120.4	4938	3	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	0.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTGTTTGTGTGTTT	-142312927	True	NA	-1	True	TATAAA	-34	NA	142325001	142310426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142315156_142319743_142319795_142324843
transcript_116557.known	chr5	-	4904	2	FSM	ENSG00000187678.10	ENST00000434127.3	4904	2	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGGTGTGTTTGTGTG	-142312947	True	NA	-4	True	TATAAA	-31	NA	142325021	142310429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142315156_142324843
transcript_116558.known	chr5	-	3748	4	FSM	ENSG00000113578.18	ENST00000337706.7	3748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCTGAGTTTCTGA	-142686078	True	NA	NA	False	AATAAA	-19	NA	142686090	142592177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142595485_142600701_142600806_142613958_142614162_142685956
transcript_116559.known	chr5	-	992	4	FSM	ENSG00000113578.18	ENST00000494344.5	992	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAAAAATGTTCCCTTG	-142698040	False	NA	NA	False	NA	NA	NA	142698052	142595230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_142595485_142600701_142600806_142613958_142614162_142697621
transcript_11656.known	chr1	+	975	4	FSM	ENSG00000163472.19	ENST00000357501.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.31816613336672	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCTCCACTCCCCGGC	156282740	True	NA	NA	False	NA	NA	NA	156282952	156291948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156283066_156285183_156285268_156286259_156286474_156291384
transcript_116561.nnic	chr5	+	448	2	Intergenic	novelGene_50	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTAAGATAAAGCAGCAAG	NA	False	NA	19	True	AATAAA	-19	NA	142703196	142705771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_142703491_142705617
transcript_116562.nnic	chr5	+	799	2	Intergenic	novelGene_51	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATGTATAAATGAGC	142701718	True	NA	NA	False	NA	NA	NA	142703348	142706274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_+_142703491_142705617
transcript_11657.known	chr1	+	2191	4	FSM	ENSG00000163472.19	ENST00000295694.9	2191	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2.62466929133727	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	156282735	True	NA	13	True	AATAAA	-13	NA	156282947	156292443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156283066_156285183_156285984_156286259_156286474_156291384
transcript_116574.nnic	chr5	+	625	5	NNC	ENSG00000236714.3	novel	2855	6	NA	NA	-12877	-14069	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.29128784747792	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAACCTCCCTAG	142701721	True	NA	NA	False	GATAAA	-6	NA	142703351	142745338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_142703491_142712800_142712878_142716207_142716335_142718115_142718267_142745207
transcript_11658.known	chr1	+	2155	4	FSM	ENSG00000163472.19	ENST00000405535.3	2155	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.23609564462324	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGCTCTTTTTTCCT	156284290	True	NA	13	True	AATAAA	-13	NA	156284324	156292443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156284407_156285183_156285984_156286259_156286474_156291384
transcript_116583.nnic	chr5	+	275	2	NNC	ENSG00000236714.3	novel	2752	5	NA	NA	-12880	-14067	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	0	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAACCTCCCTAGAG	142701718	True	NA	NA	False	GATAAA	-8	NA	142703348	142745340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_142703491_142745207
transcript_116584.known	chr5	+	1228	9	FSM	ENSG00000145819.18	ENST00000475287.2	1228	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	18.9720188699042	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCAGTTTGTGGCACTT	142874882	False	NA	NA	False	AATAAA	-16	NA	142874892	142919443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_142875172_142879373_142879446_142885297_142885400_142894237_142894349_142901934_142902040_142903539_142903670_142907703_142907805_142913198_142913294_142919210
transcript_116585.known	chr5	-	2594	9	FSM	ENSG00000113580.15	ENST00000503201.1	2594	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	5.66651347832157	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTTTGTTGTTTTATTT	-143404368	True	NA	NA	False	TATAAA	-19	NA	143404544	143281810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_143282042_143282567_143282726_143295459_143295591_143298667_143298813_143300484_143300764_143310096_143310214_143314001_143314169_143399655_143400853_143404375
transcript_116587.known	chr5	-	2255	6	FSM	ENSG00000145817.17	ENST00000448443.6	2255	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	107.38826751559	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACTGTGTTATTGAAT	-144165973	True	NA	-4	True	ATTAAA	-15	NA	144170630	144159272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170283
transcript_116589.known	chr5	-	3144	6	FSM	ENSG00000145817.17	ENST00000274496.10	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	25.0519460321948	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTATGTGGCGCTTTTTT	-144166002	True	NA	-3	True	ATTAAA	-25	NA	144170659	144158161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144160560_144162217_144162400_144164110_144164257_144165431_144165605_144169845_144169966_144170534
transcript_116590.known	chr5	-	793	4	FSM	ENSG00000145817.17	ENST00000508754.1	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	16.9967317119759	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAACAACAGGTATAGC	-144165983	True	NA	NA	False	ATTAAA	-28	NA	144170640	144163862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_144164257_144165431_144165605_144169845_144169966_144170534
transcript_116594.known	chr5	-	1102	8	FSM	ENSG00000186314.12	ENST00000394450.6	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	18.8484828599664	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCATGTAAGATATGTGT	-145833822	True	NA	-12	True	AATAAA	-9	NA	145835336	145760255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145825997_145826201_145835176
transcript_116596.known	chr5	-	2140	8	FSM	ENSG00000186314.12	ENST00000334744.8	2140	8	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	27.1593934590083	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-145833790	True	NA	NA	False	NA	NA	NA	145835304	145759018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819378_145819415_145819944_145820019_145823076_145823135_145835176
transcript_11660.nic	chr1	-	1120	4	NIC	ENSG00000198715.13	novel	1365	5	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	193.046338708842	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	NA	False	NA	0	True	AATAGA	-21	NA	156295702	156292686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156293210_156294017_156294237_156294364_156294566_156295525
transcript_116601.known	chr5	-	4817	7	FSM	ENSG00000186314.12	ENST00000683046.1	4817	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	7.81913607049327	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGTGTGCATTCTAA	-145833828	True	NA	-1	True	AATAAA	-15	NA	145835342	145756343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145760526_145764930_145765001_145796441_145796548_145817893_145818055_145819944_145820019_145823076_145823135_145835176
transcript_116611.known	chr5	-	338	2	FSM	ENSG00000186314.12	ENST00000505097.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAGGTAACTTGTGTAAA	-145833719	False	NA	NA	False	NA	NA	NA	145835233	145834651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_145834933_145835176
transcript_116612.known	chr5	+	555	2	FSM	ENSG00000156463.18	ENST00000506591.1	555	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATTTGACGTTACTTGA	145936629	True	NA	NA	False	AATAAA	-4	NA	145936704	145937931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_145937151_145937822
transcript_116613.known	chr5	-	4768	32	FSM	ENSG00000133706.19	ENST00000674398.1	4768	32	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	303.179145346009	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTATTACAGATTTATTC	-146160856	True	NA	-30	True	AATAAA	-14	NA	146182670	146113042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128780_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_116616.known	chr5	-	7140	32	FSM	ENSG00000133706.19	ENST00000674174.1	7140	32	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_31	315.329377040855	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	NA	False	NA	-46	True	NA	NA	NA	146182696	146110565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182621
transcript_116621.known	chr5	-	7090	31	FSM	ENSG00000133706.19	ENST00000674270.1	7090	31	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_27	307.093007988713	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146160836	True	NA	-46	True	NA	NA	NA	146182650	146110565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_116628.known	chr5	-	2641	24	FSM	ENSG00000133706.19	ENST00000512412.2	2641	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	307.388247940035	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTAAGTTATTATCTT	-146160856	True	NA	NA	False	AATAAA	-4	NA	146182670	146130867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146130936_146132897_146133082_146135600_146135665_146140203_146140262_146142871_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_116631.known	chr5	-	9858	31	FSM	ENSG00000133706.19	ENST00000674218.1	9858	31	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_18	175.683329380514	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTAAGTATCTATTTTTA	-146160856	True	NA	-46	True	NA	NA	NA	146182670	146110565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146114312_146120370_146120504_146122491_146122588_146123981_146124087_146126434_146126546_146128671_146128783_146128977_146129119_146130017_146130159_146131018_146131110_146132897_146133082_146135600_146135665_146140203_146143085_146143411_146143551_146144266_146144350_146144471_146144538_146144623_146144710_146149621_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_11664.known	chr1	-	543	3	FSM	ENSG00000198715.13	ENST00000497831.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	7	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGCTGCAGTGTGTT	-156287474	False	NA	-7	True	TATAAA	-17	NA	156291550	156290095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156290361_156290976_156291107_156291402
transcript_116642.known	chr5	-	4783	15	FSM	ENSG00000133706.19	ENST00000674417.1	4783	15	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_2	92.0655545061811	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGGGTTCTAACCT	-146160849	True	NA	NA	False	NA	NA	NA	146182663	146146511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146149700_146151861_146152003_146153173_146153228_146153733_146153811_146153892_146153981_146157402_146157629_146157727_146157796_146159406_146159471_146160373_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_11665.nnic	chr1	-	445	2	NIC	ENSG00000198715.13	novel	543	3	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	2	24	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCAGTGTGTTCCATTGT	-156287499	False	NA	0	True	TATAAA	-24	NA	156291575	156290088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156290361_156291402
transcript_11666.known	chr1	-	524	2	FSM	ENSG00000198715.13	ENST00000480968.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATTTTTTTGTATTTT	-156287430	False	4076	NA	False	NA	NA	NA	156291506	156290686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156291107_156291402
transcript_116661.nic	chr5	-	865	7	ISM	ENSG00000133706.19	ENST00000618084.2	1954	14	-12	8895	-2	2133	5prime_fragment	FALSE	canonical	3	1272	junction_2	94.7376494442533	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATTAAATTTGGGAAGC	-146160858	True	NA	14	True	AAGAAA	-1	NA	146182672	146160394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_146160487_146164309_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_116664.known	chr5	-	2533	6	FSM	ENSG00000133706.19	ENST00000505223.6	2533	6	0	0	0	0	multi-exon	FALSE	canonical	3	1272	junction_1	103.184107303402	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTAAATGGAAAAATAAAGC	-146160836	True	NA	NA	False	NA	NA	NA	146182650	146162527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146164472_146168127_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_116669.nic	chr5	-	610	5	ISM	ENSG00000133706.19	ENST00000505223.6	2533	6	-22	5601	-2	-5601	5prime_fragment	FALSE	canonical	3	1285	junction_3	92.5499864937862	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGATAGTGGTTGATAT	-146160858	True	NA	NA	False	GATAAA	-15	NA	146182672	146168128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_146168266_146171909_146171991_146172686_146172775_146177546_146177666_146182487
transcript_11667.known	chr1	-	1611	6	FSM	ENSG00000198715.13	ENST00000362007.6	1611	6	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	66.1253355379011	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTTGATGTGTG	-156291603	True	NA	-1	True	AATAGA	-20	NA	156295679	156292687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156293210_156293319_156293577_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_116673.known	chr5	-	1919	4	FSM	ENSG00000173261.9	ENST00000311450.9	1919	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.05480466765633	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTACTGTTCTTCTT	-146105554	False	NA	-5	True	AATAAA	-15	NA	146105577	146084312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146084573_146085460_146085598_146098155_146098293_146104192
transcript_116674.known	chr5	+	3311	20	FSM	ENSG00000275740.1	ENST00000506502.2	3311	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	18.7248631133837	858	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGCTCTAAGGCACATTT	146193145	True	NA	NA	False	NA	NA	NA	146203549	146339251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146314895_146315019_146339102
transcript_116676.known	chr5	+	6537	21	FSM	ENSG00000091009.8	ENST00000265271.7	6537	21	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8.41070746132571	825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTAATTCTGGCTTGT	146193200	True	NA	17	True	NA	NA	NA	146203604	146289223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_146203825_146218984_146219104_146223402_146223528_146228945_146229038_146229716_146229911_146230656_146230918_146233449_146233744_146237297_146237433_146251710_146251876_146254942_146255093_146258448_146258594_146260744_146260899_146261509_146261807_146263490_146263632_146267648_146267769_146269206_146269282_146269419_146269585_146270953_146271059_146271482_146271675_146284621_146284733_146285946
transcript_116679.nic	chr5	-	2206	11	NIC	ENSG00000156475.19	novel	2569	10	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	25	junction_8	52.1237949500993	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTCTTCTTGTTTTGT	-146878863	True	NA	-10	True	AATAAA	-17	NA	146878927	146589508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146856498_146856584_146878001_146878196_146878700
transcript_11668.known	chr1	-	1365	5	FSM	ENSG00000198715.13	ENST00000612353.4	1365	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	159.73180647573	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCTTGATGTGTGA	-156291613	True	NA	0	True	AATAGA	-21	NA	156295689	156292686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156293210_156294017_156294237_156294364_156294566_156294758_156295017_156295525
transcript_116683.known	chr5	-	10828	10	FSM	ENSG00000156475.19	ENST00000394411.9	10828	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	48.8648931010575	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCTCTCTCTCTCTCTC	-146877806	True	NA	NA	False	AATAAA	-16	NA	146878757	146580741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878590
transcript_116684.known	chr5	-	2093	10	FSM	ENSG00000156475.19	ENST00000530902.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_9	27.0860539944019	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTGTTTTGTGAAAA	-146878884	False	64	-5	True	AATAAA	-22	NA	146878894	146589503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_146590227_146592970_146593063_146600290_146600461_146638250_146638416_146650546_146650725_146691127_146691241_146697978_146698145_146701044_146701143_146878001_146878196_146878700
transcript_116692.nnic	chr5	-	1132	4	NNC	ENSG00000156475.19	novel	2569	10	NA	NA	-9515	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	70.153799295231	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAATTCTTCTTGTTTTGT	-146609880	False	NA	-10	True	AATAAA	-17	NA	146609891	146589508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_146590227_146592970_146593063_146600290_146600461_146609739
transcript_116699.known	chr5	+	798	7	FSM	ENSG00000169302.16	ENST00000626951.2	798	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.4142135623731	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGCTAAGTCTCCTGT	147234946	True	NA	NA	False	ATTAAA	-19	NA	147235105	147348830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147348694
transcript_116700.nic	chr5	+	1129	7	ISM	ENSG00000169302.16	ENST00000306304.10	2063	11	54	24474	-9	290	5prime_fragment	FALSE	canonical	2	2	junction_6	1.06718737290547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGCTTAGCACTGTT	147234857	True	NA	NA	False	AATAAA	-16	NA	147235016	147351442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_147235200_147239538_147239687_147278123_147278180_147279246_147279399_147323897_147324072_147343005_147343044_147351064
transcript_116701.known	chr5	-	5492	14	FSM	ENSG00000113657.13	ENST00000343218.10	5492	14	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_13	215.664680552634	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCCAGTCTTCTT	-147509460	True	NA	-7	True	ATTAAA	-20	NA	147510068	147390807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147394124_147395558_147395722_147397665_147397846_147399081_147399253_147400691_147400834_147401539_147401697_147405609_147405731_147408727_147408797_147412607_147412689_147413595_147413658_147415708_147415874_147418446_147418632_147424874_147424964_147509477
transcript_116702.known	chr5	-	771	2	FSM	ENSG00000113657.13	ENST00000504965.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCCTTTGAGCAGATATC	-147509519	False	NA	NA	False	NA	NA	NA	147509535	147472631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147473345_147509477
transcript_11671.known	chr1	-	2048	15	FSM	ENSG00000163468.15	ENST00000368262.7	2048	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1360.68155191223	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCATTTAGTTTGCTT	-156283751	True	NA	-67	True	NA	NA	NA	156338247	156309013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337078_156337241_156338153
transcript_116717.known	chr5	-	6001	21	FSM	ENSG00000176049.16	ENST00000265272.9	6001	21	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	11.2587743560301	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCTCTCTATTATCCAT	-147782754	False	NA	NA	False	AATAAA	-20	NA	147782775	147588565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_147591687_147612305_147612372_147617910_147618115_147620665_147620744_147623620_147623690_147628750_147628817_147629692_147629747_147631412_147631512_147632679_147632779_147636221_147636285_147636964_147637049_147639631_147639761_147640703_147640824_147641707_147641765_147644057_147644199_147644849_147644997_147648375_147648475_147650337_147650548_147660947_147661446_147671677_147671955_147782455
transcript_11672.known	chr1	-	1858	15	FSM	ENSG00000163468.15	ENST00000472765.6	1858	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	1357.05872859547	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGAGTCTCCCCTTTTCCT	-156283761	True	NA	NA	False	NA	NA	NA	156338257	156309164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156337676_156337790_156338153
transcript_116724.nnic	chr5	-	716	2	NNC	ENSG00000176049.16	novel	9153	22	NA	NA	-18	-89616	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAAGTAAATGGTTC	NA	False	NA	NA	False	AATAAA	-26	NA	147782793	147737991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147738370_147782455
transcript_116725.nnic	chr5	-	624	2	NNC	ENSG00000176049.16	novel	9153	22	NA	NA	-18	-89708	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTAAGAGTAGCTGTCTCT	NA	False	NA	NA	False	AATAAA	-23	NA	147782793	147738083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147738370_147782455
transcript_116726.nnic	chr5	+	731	5	NNC	ENSG00000287630.1	novel	2375	2	NA	NA	-4177	14822	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	8.52569645248997	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGACTTTTTTGTA	147721198	True	NA	NA	False	AATAAA	-15	NA	147721373	147743286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147721531_147722232_147722310_147725441_147725581_147739311_147739576_147743192
transcript_116729.nnic	chr5	+	760	4	NNC	ENSG00000287630.1	novel	2375	2	NA	NA	-4177	-1958	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	7.36357401145817	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCTCTGTAAAGTTTT	147721198	True	NA	8	True	AATAAA	-18	NA	147721373	147726506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_147721531_147722232_147722310_147725441_147725581_147726119
transcript_116739.nnic	chr5	-	806	6	Fusion	ENSG00000288774.1_ENSG00000164266.11	novel	413	4	NA	NA	185	0	multi-exon	FALSE	canonical	1	3	junction_4	2.22710574513201	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	-147874114	False	NA	NA	False	AATAAA	-16	NA	147874146	147824581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147850463_147850543_147873929
transcript_116740.nnic	chr5	-	1043	6	Fusion	ENSG00000288774.1_ENSG00000164266.11	novel	413	4	NA	NA	53	0	multi-exon	FALSE	canonical	0	0	junction_4	22.7806935803105	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	-147872714	True	NA	NA	False	AATAAA	-16	NA	147874278	147824581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147872169_147872354_147873929
transcript_116741.nnic	chr5	-	610	5	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37201	0	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_4	2.27760839478607	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	-147868840	False	88	NA	False	AATAAA	-16	NA	147868872	147824581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831769_147868772
transcript_116743.nnic	chr5	-	632	5	NNC	ENSG00000164266.11	novel	413	4	NA	NA	-37190	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.20156211871642	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTTCCATTTGCTT	-147868829	False	88	NA	False	AATAAA	-16	NA	147868861	147824581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_147824707_147828021_147828129_147829598_147829631_147831522_147831802_147868772
transcript_11677.known	chr1	-	1885	13	FSM	ENSG00000163468.15	ENST00000368258.7	1885	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	1074.13268306729	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	-156283767	True	NA	-22	True	ATTAAA	-14	NA	156338263	156308968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156338153
transcript_11683.known	chr1	+	512	4	FSM	ENSG00000163467.12	ENST00000368253.6	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.85861230093008	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAGTTATTGTGTTGTTT	156338209	True	NA	NA	False	AGTAAA	-12	NA	156338502	156346990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338606_156339734_156339792_156344579_156344709_156346767
transcript_11685.known	chr1	+	595	4	FSM	ENSG00000163467.12	ENST00000368254.6	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	3.68178700572909	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTGTGTTGTTTTCCTC	156338232	True	NA	NA	False	AGTAAA	-17	NA	156338525	156346995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346767
transcript_11686.known	chr1	+	601	4	FSM	ENSG00000163467.12	ENST00000470342.5	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2.16024689946929	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTATTGTGTTGTTTTCC	156338213	True	NA	NA	False	AGTAAA	-15	NA	156338506	156346993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338606_156339633_156339792_156344579_156344709_156346778
transcript_116887.known	chr5	+	549	3	FSM	ENSG00000164265.9	ENST00000507160.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	574	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147871046	False	NA	NA	False	AATAAA	-12	NA	147871497	147882190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147871680_147881445_147881649_147882026
transcript_116893.known	chr5	+	440	3	FSM	ENSG00000164265.9	ENST00000504320.5	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	529.5	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCAGTCGTCCTATTTT	147869584	True	NA	NA	False	AATAAA	-12	NA	147870681	147882190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147870755_147881445_147881649_147882026
transcript_116932.known	chr5	+	672	3	FSM	ENSG00000164265.9	ENST00000514688.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	217	5083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCAGTCGTCCTATTTTT	147871352	True	NA	NA	False	AATAAA	-13	NA	147872017	147882191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_147872322_147881445_147881649_147882026
transcript_11694.known	chr1	-	1977	14	FSM	ENSG00000163468.15	ENST00000295688.8	1977	14	0	0	0	0	multi-exon	FALSE	canonical	3	3511	junction_10	243.134389507011	14964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTGTTATGTGTTTTT	-156283796	True	NA	-21	True	ATTAAA	-15	NA	156338292	156308967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_116948.nnic	chr5	-	750	3	NNC	ENSG00000247199.6	novel	2991	5	NA	NA	52589	-5430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAGTTGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	148231101	148093659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_148093743_148100436_148100598_148230595
transcript_11695.known	chr1	-	1815	12	FSM	ENSG00000163468.15	ENST00000368259.6	1815	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	1100.75232725187	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAGTTGTTATGTGTTTT	-156283749	True	NA	-22	True	ATTAAA	-14	NA	156338245	156308968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156309304_156310557_156310690_156310949_156311196_156312040_156312222_156317165_156317248_156317414_156317548_156318867_156319018_156320838_156321026_156324971_156325090_156333546_156333644_156335826_156335889_156338153
transcript_116954.known	chr5	-	1595	2	FSM	ENSG00000247199.6	ENST00000663936.2	1671	2	0	76	0	-76	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTTATATATTAAATATA	NA	False	NA	NA	False	NA	NA	NA	148383907	148377659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_148378846_148383498
transcript_116955.nnic	chr5	-	635	2	NNC	ENSG00000247199.6	novel	2991	5	NA	NA	52543	-5430	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAAGTTGTGAGAAG	NA	False	NA	NA	False	NA	NA	NA	148231147	148093659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_148093743_148230595
transcript_116958.nnic	chr5	+	776	3	NNC	ENSG00000214510.10	novel	1022	6	NA	NA	12030	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	0.5	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGTGTATTGATTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	148280889	148286254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_148281283_148282103_148282232_148285999
transcript_11696.known	chr1	-	1063	6	FSM	ENSG00000163468.15	ENST00000368256.3	1063	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1551.47782452731	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATAAAGGACACTTTTTT	-156283815	True	NA	NA	False	AATATA	-2	NA	156338311	156332652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156333285_156333546_156333644_156334712_156334776_156334867_156334919_156335826_156335889_156338153
transcript_116960.known	chr5	+	4401	22	FSM	ENSG00000145868.17	ENST00000340253.10	4401	22	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_14	14.8449278235419	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTGCCTTGGACCTGAA	148381840	True	NA	NA	False	AATAAA	-18	NA	148383957	148442836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148427212_148427948_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_116962.known	chr5	+	3680	21	FSM	ENSG00000145868.17	ENST00000296701.10	3680	21	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	21.5172024203891	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAACTTTTCTCTTGCCTT	148381817	True	NA	NA	False	AATAAA	-9	NA	148383934	148442827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634_148410766_148414135_148414307_148415927_148416071_148416993_148417205_148423997_148424118_148425521_148425702_148433423_148433525_148433634_148433738_148438331_148438499_148439646_148439793_148440423_148440528_148441123_148441238_148441968
transcript_116964.nic	chr5	+	1403	9	ISM	ENSG00000145868.17	ENST00000296701.10	3680	21	14	31906	-3	53	5prime_fragment	FALSE	canonical	3	70	junction_7	7.73688406272189	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGATTTTTTTTTCC	148381831	True	NA	NA	False	AATAAA	-16	NA	148383948	148410921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_148384040_148394713_148394905_148398998_148399133_148401981_148402146_148402347_148402514_148404684_148404823_148406256_148406395_148409123_148409218_148410634
transcript_116967.known	chr5	+	2013	1	FSM	ENSG00000169252.6	ENST00000305988.6	2013	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCATTGCACCTGTTTCT	148826542	True	NA	21	True	AATAAA	-14	NA	148826610	148828623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_148826600_148828600
transcript_116968.known	chr5	+	1289	9	FSM	ENSG00000157510.14	ENST00000455574.6	1289	9	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_7	7.59522876548166	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATGCATGAACAAACGAG	149271177	True	NA	NA	False	AATAAA	-16	NA	149271870	149312375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149271985_149299508_149299638_149300270_149300355_149301132_149301231_149302417_149302527_149306305_149306405_149307401_149307614_149309955_149310136_149312111
transcript_116969.known	chr5	-	857	2	FSM	ENSG00000285736.1	ENST00000648705.1	857	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGCTTATGGGATTT	-149345274	True	NA	NA	False	AATAAA	-18	NA	149345333	149324219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149324915_149345171
transcript_11697.known	chr1	+	477	4	FSM	ENSG00000163467.12	ENST00000466306.5	477	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.71722460186015	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTATTGTGTTGTTTTC	156338494	False	NA	NA	False	AGTAAA	-14	NA	156338787	156346992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156338865_156339734_156339792_156344579_156344709_156346778
transcript_116970.known	chr5	+	4020	4	FSM	ENSG00000164284.15	ENST00000329271.8	4020	4	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	3.29983164553722	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTTTAGAGTCTT	149341122	True	NA	13	True	AATAAA	-22	NA	149345498	149354583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149345617_149348271_149348426_149349653_149349736_149350917
transcript_116971.known	chr5	+	1006	3	FSM	ENSG00000164284.15	ENST00000416916.2	1006	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	121	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAGGGATTGGTTCAA	149341125	True	NA	NA	False	AAAAAG	-3	NA	149345501	149351654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149345617_149348271_149348426_149350917
transcript_116978.known	chr5	-	5444	11	FSM	ENSG00000113712.19	ENST00000261798.10	5444	11	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_6	523.08492618312	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_116980.known	chr5	-	2570	11	FSM	ENSG00000113712.19	ENST00000515768.6	2570	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	588.018443588294	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCATTCTTTCATTTTTTT	-149536963	True	NA	NA	False	AAAAAG	-24	NA	149551404	149495784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149517793_149517878_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_116992.known	chr5	-	5360	10	FSM	ENSG00000113712.19	ENST00000377843.8	5360	10	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	302.854485695974	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACTCACTGAATAAGATAC	-149536998	True	NA	NA	False	AATAAA	-16	NA	149551439	149492981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505446_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_116993.known	chr5	-	4902	10	FSM	ENSG00000113712.19	ENST00000657001.1	4902	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	439.973175388828	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGCTAGGAGCAGTG	-149536956	True	NA	NA	False	NA	NA	NA	149551397	149493361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149520289_149520389_149525044_149525172_149550074_149550182_149550841
transcript_117007.known	chr5	-	2413	11	FSM	ENSG00000113712.19	ENST00000661952.1	2413	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	684.165835159868	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTATTAAATAAAAATCTC	-149550871	True	NA	39	True	TTTAAA	-24	NA	149551471	149495939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149496861_149505482_149505596_149507026_149507134_149509878_149509954_149511793_149511873_149513069_149513210_149515668_149515727_149517793_149517878_149520289_149520389_149550074_149550182_149550841
transcript_117008.known	chr5	+	8054	3	FSM	ENSG00000155850.9	ENST00000286298.5	8054	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTACTCTGTATTTAAATT	149959270	True	NA	10	True	AATAAA	-18	NA	149960757	149987400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_149960980_149977627_149978352_149980292
transcript_117012.nnic	chr5	+	1461	2	Genic_Genomic	ENSG00000214485.6	novel	747	1	NA	NA	-72782	80	multi-exon	FALSE	canonical	0	0	junction_1	0	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAACAGAGCTTCAAA	NA	False	NA	NA	False	AATAAA	-38	NA	150021519	150095128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_150022070_150094217
transcript_117013.nnic	chr5	+	1489	2	Genic_Genomic	ENSG00000214485.6	novel	747	1	NA	NA	-72782	74	multi-exon	FALSE	canonical	0	0	junction_1	0	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAACAGAGC	NA	False	NA	NA	False	AATAAA	-32	NA	150021519	150095122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_150022072_150094185
transcript_117014.nnic	chr5	+	1470	2	Genic_Genomic	ENSG00000214485.6	novel	747	1	NA	NA	-72782	76	multi-exon	FALSE	canonical	0	0	junction_1	0	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGAACAGAGCTT	NA	False	NA	NA	False	AATAAA	-34	NA	150021519	150095124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_150022074_150094208
transcript_117015.known	chr5	-	3493	2	FSM	ENSG00000164296.7	ENST00000296736.4	3493	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGTACATATTTTAAAT	-150000385	True	NA	NA	False	AATAAA	-25	NA	150000654	149993117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_149996430_150000473
transcript_117016.known	chr5	-	657	2	FSM	ENSG00000164296.7	ENST00000532987.1	657	2	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTGATTTGGCTCTTG	-150000384	True	NA	-20	True	AATAAA	-27	NA	150000653	149999839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150000317_150000473
transcript_117017.nnic	chr5	-	1447	2	Genic_Genomic	ENSG00000241907.1	novel	355	1	NA	NA	-73208	47	multi-exon	FALSE	canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATGTTTTAAGATAGT	NA	False	NA	NA	False	AATACA	-30	NA	150095129	150021519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_-_150022042_150094204
transcript_117018.known	chr5	+	747	1	FSM	ENSG00000214485.6	ENST00000468161.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	406	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	150094275	True	NA	NA	False	AATGAA	-5	NA	150094301	150095048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150094300_150095000
transcript_117020.known	chr5	-	822	3	FSM	ENSG00000113721.14	ENST00000517488.1	822	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCCCCCTTTCTGGCCT	-150155284	False	NA	NA	False	NA	NA	NA	150155627	150134749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150135017_150135554_150135879_150155396
transcript_117021.known	chr5	+	5026	27	FSM	ENSG00000070814.22	ENST00000643257.2	5026	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	208.362678801075	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTCCCAGTGCATCTGG	150330701	True	NA	19	True	AATAAA	-19	NA	150357696	150400293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_117022.known	chr5	+	4825	26	FSM	ENSG00000070814.22	ENST00000445265.6	4825	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	244.009953895328	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCTCCCAGTGCATCTG	150330670	True	NA	18	True	AATAAA	-18	NA	150357665	150400292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150387901_150388089_150389886_150390024_150391543_150391658_150391956_150392177_150392704_150392791_150393371_150393553_150396281_150396843_150398353_150398452_150399021_150399071_150399809
transcript_117024.known	chr5	+	3400	18	FSM	ENSG00000070814.22	ENST00000394269.7	3400	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	279.100036635302	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACATCGGTAACTCCCTG	150330722	True	NA	0	True	AGTAAA	-13	NA	150357717	150384249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383737
transcript_117034.known	chr5	-	3092	9	FSM	ENSG00000019582.17	ENST00000009530.13	1653	9	159	-1598	0	1596	multi-exon	FALSE	canonical	3	27	junction_3	133.649670313847	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAAGCGTCCTGTGTTGG	-150409151	True	NA	NA	False	AATACA	-18	NA	150412751	150400040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_117037.known	chr5	+	661	8	FSM	ENSG00000070814.22	ENST00000515516.1	661	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	367.806903642858	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAACTGTTACCTTCCCT	150357771	False	NA	NA	False	NA	NA	NA	150357782	150399881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150396742_150396843_150398353_150398452_150399021_150399071_150399809
transcript_117039.known	chr5	-	1270	8	FSM	ENSG00000019582.17	ENST00000353334.11	1270	8	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	25.3175747621437	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACATTAGAATAAAAGGT	-150409150	True	NA	-38	True	NA	NA	NA	150412750	150401669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150404679_150404768_150405084_150405181_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_117052.known	chr5	-	2771	8	FSM	ENSG00000019582.17	ENST00000523813.2	2771	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	139.042645051283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGGTAGTAATTAGAAC	NA	False	NA	-26	True	NA	NA	NA	150412969	150401657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150403120_150403313_150404679_150404768_150405084_150406322_150406880_150406961_150407151_150407325_150412624
transcript_117054.known	chr5	+	3526	19	FSM	ENSG00000070814.22	ENST00000513538.2	3526	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	320.656598748549	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGGTAACTCCCTGTATT	150330708	True	NA	4	True	AGTAAA	-17	NA	150357703	150384253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150357855_150361155_150361212_150364112_150364253_150367843_150367918_150368715_150368903_150369528_150369603_150372005_150372237_150374173_150374387_150374616_150374812_150374953_150375164_150375338_150375555_150375720_150375910_150376081_150376331_150376422_150376621_150378904_150379043_150379228_150379409_150379531_150379733_150383064_150383173_150383737
transcript_117055.known	chr5	-	1138	6	FSM	ENSG00000019582.17	ENST00000377795.7	1138	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	137.280151515068	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTCCTGGCTCTTCT	-150409169	True	NA	-5	True	AATAAA	-18	NA	150412769	150401636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150402251_150402562_150402626_150406258_150406322_150406880_150406961_150407151_150407325_150412624
transcript_11706.nnic	chr1	+	889	4	NIC	ENSG00000132677.13	novel	1790	10	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.49443825784929	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTGACTCTTTGTCTT	156369135	True	NA	4	True	GATAAA	-16	NA	156369186	156385219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156369437_156382747_156382870_156384526_156384601_156384776
transcript_117070.known	chr5	-	620	5	FSM	ENSG00000164587.13	ENST00000642507.1	620	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13217.1927687955	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAACAAGATTCCTCAA	-150449374	False	NA	1	True	NA	NA	NA	150449436	150444291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449268
transcript_117079.known	chr5	-	2146	5	FSM	ENSG00000164587.13	ENST00000407193.7	2146	5	0	0	0	0	multi-exon	FALSE	canonical	3	21984	junction_4	3950.2178025395	195781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGGTTTCCTACTTTTG	-150236839	True	NA	NA	False	AATAAA	-41	NA	150449739	150442634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449702
transcript_117080.known	chr5	-	712	5	FSM	ENSG00000164587.13	ENST00000312037.6	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_4	11962.2284922167	67516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150236791	True	NA	-28	True	AATAAA	-16	NA	150449691	150444237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801_150446964_150447584_150447736_150449485
transcript_117081.known	chr5	-	3119	3	FSM	ENSG00000164587.13	ENST00000519690.1	3119	3	0	0	0	0	multi-exon	FALSE	canonical	3	27622	junction_1	2023.5	1914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150236827	True	NA	-28	True	AATAAA	-16	NA	150449727	150444237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150445608_150445686_150446801
transcript_117082.known	chr5	-	669	5	FSM	ENSG00000164587.13	ENST00000518139.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	15763.9001261585	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTCAACTCCAGCCTTC	-150447673	False	212900	-28	True	AATAAA	-16	NA	150447735	150444237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150444354_150444478_150444642_150445608_150445686_150446801_150446964_150447584
transcript_117083.known	chr5	-	368	3	FSM	ENSG00000254333.1	ENST00000519040.1	368	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTCATTTCCCCTTTTA	-150485948	False	NA	NA	False	AATAAA	-7	NA	150485968	150475530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150475760_150485228_150485300_150485900
transcript_117087.nnic	chr5	-	1593	6	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-161	5074	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.905394636615	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672551	150665583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150668116_150668273_150668385_150668599_150670149_150670210_150670527_150670808_150672115
transcript_117094.nnic	chr5	-	1380	5	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-161	5074	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	11.0227038425243	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672551	150665583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150668116_150668273_150670149_150670210_150670527_150670808_150672115
transcript_117104.nnic	chr5	-	794	4	NNC	ENSG00000250309.2	novel	425	2	NA	NA	145	5074	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	11.3137084989848	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	-150671812	True	NA	-11	True	AATAAA	-16	NA	150672245	150665583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150668116_150668273_150670149_150670210_150672115
transcript_117110.nnic	chr5	-	1224	4	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-161	5074	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	10.1980390271856	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672551	150665583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150670149_150670210_150670527_150670808_150672115
transcript_117115.nnic	chr5	-	960	3	Genic_Genomic	ENSG00000250309.2	novel	425	2	NA	NA	-101	5074	multi-exon	FALSE	canonical	0	0	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	NA	False	NA	-11	True	AATAAA	-16	NA	150672491	150665583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_-_150666032_150670149_150670210_150672039
transcript_117116.nnic	chr5	-	875	3	NNC	ENSG00000250309.2	novel	425	2	NA	NA	-92	5074	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_2	1.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTGAGTATTTCTATT	-150672219	True	NA	-11	True	AATAAA	-16	NA	150672482	150665583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150666032_150670149_150670210_150672115
transcript_117118.known	chr5	-	425	2	FSM	ENSG00000250309.2	ENST00000511626.2	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAATGGTGGCTTACTCACC	-150672127	False	NA	NA	False	NA	NA	NA	150672390	150670657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150670808_150672115
transcript_117122.known	chr5	-	2299	11	FSM	ENSG00000086589.12	ENST00000199814.9	2299	11	0	0	0	0	multi-exon	FALSE	canonical	2	200	junction_5	43.3912433562349	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGTCATGGGTTTATT	-150697640	True	NA	-6	True	ATTAAA	-17	NA	150701062	150690791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150691882_150692894_150693027_150693218_150693308_150694075_150694241_150695505_150695707_150696532_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_117133.nnic	chr5	-	1055	7	NNC	ENSG00000086589.12	novel	2299	11	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	121.880291907903	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGTTGTCATGGGTTTA	-150701110	False	NA	-8	True	ATTAAA	-15	NA	150701125	150690793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_150691205_150696573_150696706_150696790_150696892_150698498_150698632_150699241_150699272_150700443_150700498_150700931
transcript_117135.known	chr5	-	4116	13	FSM	ENSG00000132912.13	ENST00000447998.7	4116	13	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	14.4683562761405	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTGGCCACTCATCACCT	-150755343	True	NA	NA	False	AATATA	-19	NA	150759017	150708439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150711363_150715564_150715663_150718275_150718384_150719715_150719771_150722906_150722981_150730630_150730741_150731043_150731157_150731415_150731490_150733367_150733476_150742113_150742158_150753478_150753658_150756416_150756488_150758858
transcript_117139.known	chr5	+	1521	2	FSM	ENSG00000256235.3	ENST00000526627.2	1521	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	150777596	True	NA	7	True	AATAAA	-14	NA	150778756	150796734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150778973_150795429
transcript_117140.known	chr5	+	1590	3	FSM	ENSG00000256235.3	ENST00000648745.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGAGGTCTTTCTTT	150777644	True	NA	7	True	AATAAA	-14	NA	150778804	150796734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_150778973_150782473_150782591_150795429
transcript_117144.known	chr5	-	3256	6	FSM	ENSG00000145908.13	ENST00000394226.2	3256	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	59.8952418811378	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150902599	True	NA	-21	True	CATAAA	-21	NA	150904978	150894398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150896970_150898057_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_117150.known	chr5	-	4155	5	FSM	ENSG00000145908.13	ENST00000427179.5	4155	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	30.7652401258303	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTGCCTAATGTCTCTT	-150904779	False	NA	-21	True	CATAAA	-21	NA	150904789	150894398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150898185_150898427_150898555_150903140_150903183_150903863_150903978_150904703
transcript_117153.nic	chr5	-	519	4	ISM	ENSG00000145908.13	ENST00000446148.6	3323	7	0	8721	0	-8714	5prime_fragment	FALSE	canonical	3	20	junction_1	63.8766171789194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTGGTTTTTCATA	-150904973	False	NA	NA	False	TTTAAA	-12	NA	150904983	150903112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150903183_150903328_150903384_150903863_150903978_150904703
transcript_117154.nic	chr5	-	464	3	ISM	ENSG00000145908.13	ENST00000274599.10	3258	6	-3	8714	0	-8714	5prime_fragment	FALSE	canonical	3	89	junction_1	37.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTGGTTTTTCATA	-150904973	False	NA	NA	False	TTTAAA	-12	NA	150904983	150903112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150903183_150903863_150903978_150904703
transcript_117155.nic	chr5	-	1125	2	ISM	ENSG00000145908.13	ENST00000418587.6	3226	5	20	8721	15	-8714	5prime_fragment	FALSE	canonical	3	164	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCTTTGGTTTTTCATA	-150902584	True	NA	NA	False	TTTAAA	-12	NA	150904963	150903112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_150903978_150904703
transcript_117156.known	chr5	-	3323	7	FSM	ENSG00000145908.13	ENST00000446148.6	3323	7	0	0	0	0	multi-exon	FALSE	non_canonical	1	20	junction_4	62.22182539556	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTCTCTTCACTTCT	-150904973	False	NA	-14	True	CATAAA	-28	NA	150904983	150894391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_150896974_150898061_150898185_150898427_150898555_150903140_150903183_150903328_150903384_150903863_150903978_150904703
transcript_117160.known	chr5	+	1757	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-153	4	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	176.616647007013	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTACTGTGTGTGGTGCT	NA	False	NA	20	True	AGTAAA	-20	NA	151020437	151028992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151020742_151025339_151025469_151025471_151025494_151026899_151027018_151027431_151027532_151027908
transcript_117162.known	chr5	+	1478	6	NNC	ENSG00000211445.13	novel	1603	5	NA	NA	-2	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	176.616647007013	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGAGCCTACTGTGTGTG	151018056	True	NA	15	True	AGTAAA	-15	NA	151020588	151028987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908_151028777_151028902
transcript_117166.known	chr5	+	1603	5	FSM	ENSG00000211445.13	ENST00000388825.9	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_4	20.0919760103381	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCCTACTGTGTGTGG	151018058	True	NA	16	True	AGTAAA	-16	NA	151020590	151028988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151020742_151025339_151025494_151026899_151027018_151027431_151027532_151027908
transcript_117168.known	chr5	+	612	4	FSM	ENSG00000211445.13	ENST00000517973.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	200.150498930735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGACTTTGTTCAGGAAG	151018073	True	NA	NA	False	NA	NA	NA	151020605	151028166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151020742_151026899_151027018_151027431_151027532_151027908
transcript_117169.known	chr5	-	2935	18	FSM	ENSG00000145901.16	ENST00000389378.6	2935	18	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	38.1022118349159	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTCTGACTCATGTTCA	-151078645	True	NA	-9	True	CATAAA	-19	NA	151081084	151029946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151030748_151032286_151032401_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151064959_151065132_151080879
transcript_11717.known	chr1	-	726	4	FSM	ENSG00000125462.19	ENST00000441085.6	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCCTGAATGTTGGG	-156456655	False	NA	NA	False	AATAAA	-22	NA	156456668	156446410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156446574_156454642_156454796_156455627_156455722_156456352
transcript_117171.known	chr5	-	2680	17	FSM	ENSG00000145901.16	ENST00000520931.5	2680	17	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_16	39.3200012716175	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTGACTCATGTTCATT	-151078577	True	NA	-7	True	CATAAA	-21	NA	151081016	151029944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151030748_151032286_151032384_151033607_151033800_151035001_151035068_151035581_151035708_151036789_151036922_151039096_151039226_151042539_151042672_151042895_151042962_151045860_151045951_151049823_151049948_151052164_151052260_151056765_151056958_151060317_151060396_151062126_151062213_151063612_151063748_151080879
transcript_117172.known	chr5	-	2889	26	FSM	ENSG00000197043.14	ENST00000354546.10	2889	26	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_17	23.9193979857353	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCAGTGAGGGCCTCTGT	-151146541	True	NA	NA	False	AATAAA	-27	NA	151157779	151100705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151101508_151103569_151103693_151105244_151105304_151108454_151108551_151109752_151109847_151110626_151110645_151117126_151117181_151117757_151117838_151119299_151119391_151122146_151122261_151122916_151123012_151124285_151124368_151126401_151126481_151128180_151128240_151129406_151129530_151131230_151131290_151132475_151132572_151133093_151133188_151134426_151134484_151136255_151136336_151137230_151137322_151138677_151138792_151139352_151139448_151140152_151140244_151147883_151147927_151157679
transcript_117174.known	chr5	-	899	2	FSM	ENSG00000197043.14	ENST00000519610.1	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGCTCCAGCATCTATA	-151146523	True	NA	NA	False	ACTAAA	-29	NA	151157761	151154884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151155702_151157679
transcript_117176.known	chr5	-	3398	9	FSM	ENSG00000198624.13	ENST00000355417.7	3398	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	4.8331537322953	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGTGACTTTTGTGTTT	-151222649	True	NA	-8	True	AAAAAG	-17	NA	151224092	151181051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151183615_151184343_151184442_151185421_151185542_151186022_151186125_151187385_151187460_151198996_151199085_151201581_151201689_151205399_151205476_151223922
transcript_117177.nic	chr5	-	1138	7	ISM	ENSG00000198624.13	ENST00000355417.7	3398	9	-1	3970	0	400	5prime_fragment	FALSE	canonical	3	43	junction_3	3.77491721763537	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTGACTTTTAATTTTG	-151222650	True	NA	NA	False	AATAAA	-20	NA	151224093	151185021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_151185542_151186022_151186125_151187385_151187460_151198996_151199085_151201581_151201689_151205399_151205476_151223922
transcript_117178.nnic	chr5	+	908	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-18	-46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	57.7797542396989	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGACTGGGAGAAAAA	151247694	True	NA	1	True	AATAAA	-26	NA	151253166	151270394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151267483_151270149
transcript_117179.nnic	chr5	+	928	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-29	-46	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	55.6164319243872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGACTGGGAGAAAAA	151247683	True	NA	1	True	AATAAA	-26	NA	151253155	151270394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151267492_151270149
transcript_11718.known	chr1	-	781	4	FSM	ENSG00000125462.19	ENST00000667036.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTTGAGTTACAGAAT	-156456627	False	NA	NA	False	ATTAAA	-20	NA	156456640	156453006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156453253_156454642_156454796_156455627_156455722_156456352
transcript_117181.nnic	chr5	+	1951	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-114	-1194	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	57.7797542396989	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTGCCTTGGCTGCAT	151247598	True	NA	23	True	AATAAA	-23	NA	151253070	151269246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268094_151268665
transcript_117184.nnic	chr5	+	1935	5	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-18	-1202	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	57.7797542396989	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTTTCCCCTTGCCTT	151247694	True	NA	15	True	AATAAA	-15	NA	151253166	151269238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295_151268182_151268665
transcript_117186.nnic	chr5	+	630	4	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-18	-101	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	61.9910387789146	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCGTCTCTCATCTTGTG	151247694	True	NA	NA	False	NA	NA	NA	151253166	151267154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151267000
transcript_117187.known	chr5	+	3603	4	FSM	ENSG00000196743.9	ENST00000357164.4	3603	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTAGTGTTCTTACTATA	151247712	True	NA	47	True	AATAGA	-5	NA	151253184	151270440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151253298_151259754_151259917_151266730_151266914_151267295
transcript_11719.known	chr1	-	542	3	FSM	ENSG00000125462.19	ENST00000497822.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCCATCCCAGTTTATCC	-156421504	True	NA	-110	True	NA	NA	NA	156421758	156404363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156414653_156414754_156421554
transcript_117191.nnic	chr5	+	817	4	NNC	ENSG00000196743.9	novel	3603	4	NA	NA	-114	-46	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	61.5196445590079	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGACTGGGAGAAAAA	151247598	True	NA	1	True	AATAAA	-26	NA	151253070	151270394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_151253298_151259754_151259917_151266730_151266914_151270149
transcript_117192.nic	chr5	+	715	3	ISM	ENSG00000196743.9	ENST00000357164.4	3603	4	-18	3288	-18	-103	5prime_fragment	FALSE	canonical	3	131	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCGTCTCTCATCTTG	151247694	True	NA	NA	False	NA	NA	NA	151253166	151267152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151253298_151259754_151259917_151266730
transcript_117193.known	chr5	-	291	2	FSM	ENSG00000198624.13	ENST00000519740.1	291	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGAAGCCCCCTCCATG	-151222649	True	NA	NA	False	NA	NA	NA	151224092	151215565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151215687_151223922
transcript_117198.nic	chr5	+	1293	7	ISM	ENSG00000123643.13	ENST00000521925.5	1621	10	-37	11493	-13	-2693	5prime_fragment	FALSE	canonical	3	57	junction_5	6.48074069840786	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATATATATATATATAT	151445558	True	NA	NA	False	NA	NA	NA	151447589	151468266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706
transcript_1172.known	chr1	+	695	8	FSM	ENSG00000157916.20	ENST00000306256.13	695	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	469.03204711884	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACATGGGAAGAGAAGGTA	2381575	True	NA	NA	False	NA	NA	NA	2391842	2403064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2391959_2395607_2395649_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_117200.nic	chr5	+	1142	2	ISM	ENSG00000123643.13	ENST00000517945.5	552	4	-31	10354	-7	-10354	5prime_fragment	FALSE	canonical	3	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGGCCCAGAAATCTATT	151445564	True	NA	NA	False	AATAAA	-42	NA	151447595	151453266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_151447814_151452342
transcript_117201.known	chr5	+	5772	11	FSM	ENSG00000123643.13	ENST00000243389.8	5772	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	10.2024506859872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGCTATCTGTGTCTT	151445571	True	NA	23	True	AATAAA	-23	NA	151447602	151492379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151447814_151458787_151458936_151463552_151463644_151464513_151464603_151465073_151465170_151467198_151467284_151467706_151467926_151473672_151473772_151476589_151476757_151479319_151479490_151487982
transcript_117202.known	chr5	+	552	4	FSM	ENSG00000123643.13	ENST00000517945.5	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	29.743346594939	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGTGAAAAATGCAGGCATC	151445595	True	NA	NA	False	NA	NA	NA	151447626	151463620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151447814_151452342_151452492_151458787_151458936_151463552
transcript_117205.known	chr5	-	3451	10	FSM	ENSG00000113140.11	ENST00000231061.9	3451	10	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_3	69.8327808693784	1287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGGACCGGGTGCTCC	-151662220	True	NA	NA	False	AATAAA	-22	NA	151686915	151661095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151663600_151664086_151664236_151666360_151666510_151667466_151667601_151669663_151669785_151671572_151671695_151673128_151673217_151674611_151674675_151676131_151676202_151686864
transcript_11721.known	chr1	-	780	3	FSM	ENSG00000125462.19	ENST00000663987.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTATCTGTTTACATT	-156456618	False	NA	NA	False	AATAAA	-18	NA	156456631	156446166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156446574_156455627_156455722_156456352
transcript_117211.known	chr5	+	10240	12	FSM	ENSG00000145907.16	ENST00000394123.7	10240	12	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_1	574.99688824167	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTCTCTGTTGTCC	151732613	True	NA	NA	False	AATAAA	-28	NA	151771909	151812785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772037_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_117213.known	chr5	+	1768	12	FSM	ENSG00000145907.16	ENST00000676827.1	1768	12	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	812.766747058445	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTCCTTGCTTAC	151732642	True	NA	NA	False	TTTAAA	-15	NA	151771938	151804346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772033_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_117230.nnic	chr5	-	446	3	NIC	ENSG00000177556.12	novel	749	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_2	412	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151753540	True	NA	-5	True	AATAAA	-21	NA	151758682	151742821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_151742960_151746278_151746450_151758545
transcript_117232.known	chr5	-	726	2	FSM	ENSG00000275765.6	ENST00000623943.2	1185	2	0	459	0	-459	multi-exon	FALSE	canonical	3	32	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACATTTACAGATTAGT	-151771491	False	NA	NA	False	NA	NA	NA	151771508	151770241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151770773_151771313
transcript_117233.known	chr5	-	520	1	FSM	ENSG00000213433.5	ENST00000518134.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	756	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGCCCAT	-151766361	False	NA	-40	True	AATAAA	-13	NA	151766378	151765858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151765900_151766400
transcript_117234.known	chr5	+	1794	13	FSM	ENSG00000145907.16	ENST00000678101.1	1794	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1074.38256170178	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACAGACTGGATTTTTT	151732657	True	NA	NA	False	AAAAAG	-25	NA	151771953	151804371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772037_151772656_151772669_151786602_151786716_151790322_151790405_151790888_151791063_151794158_151794250_151795478_151795576_151797226_151797429_151799211_151799314_151799888_151800001_151800217_151800347_151800759_151800870_151803884
transcript_117235.known	chr5	-	471	4	FSM	ENSG00000177556.12	ENST00000313115.11	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	70.3815000945245	9413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151753489	True	NA	-5	True	AATAAA	-21	NA	151758631	151742821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151758545
transcript_117236.known	chr5	-	591	3	FSM	ENSG00000177556.12	ENST00000522710.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_2	84.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCCTCTTTCAGAC	-151753514	True	NA	NA	False	NA	NA	NA	151758656	151746045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151746450_151751703_151751780_151758545
transcript_117237.known	chr5	-	466	4	FSM	ENSG00000177556.12	ENST00000520382.5	466	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	409.559383836934	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGTTGTCTTGCCTGGTCT	-151748753	False	NA	-5	True	AATAAA	-21	NA	151753895	151742821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_151742960_151746278_151746450_151751703_151751780_151753814
transcript_117238.known	chr5	+	1207	3	FSM	ENSG00000145907.16	ENST00000676894.1	1207	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	1060	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCTCTGACAATGGAA	151732678	True	NA	NA	False	AATAAA	-17	NA	151771974	151787868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_151772037_151786571_151786716_151786867
transcript_117239.known	chr5	+	425	3	FSM	ENSG00000254226.6	ENST00000518431.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCACTGAGTTGTTTTTGTT	NA	False	NA	NA	False	AATAAA	-16	NA	152195447	152270445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_152195531_152267264_152267356_152270194
transcript_11724.known	chr1	-	857	3	FSM	ENSG00000125462.19	ENST00000452465.2	857	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCAAGTGATCTACATGG	-156456739	False	NA	NA	False	ATTAAA	-18	NA	156456752	156452889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156453253_156455627_156455722_156456352
transcript_117240.known	chr5	-	2121	15	FSM	ENSG00000055147.19	ENST00000520667.5	2121	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	30.2017028848185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-154037573	True	NA	NA	False	AATAAA	-20	NA	154038921	153992498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038387_154038435_154038856
transcript_117242.nic	chr5	-	2224	15	NIC	ENSG00000055147.19	novel	2121	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_13	28.223235470232	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCATATGTAAACTCTG	-154037581	True	NA	NA	False	AATAAA	-20	NA	154038929	153992498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038292_154038435_154038856
transcript_117244.known	chr5	-	4414	14	FSM	ENSG00000055147.19	ENST00000351797.9	4414	14	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_13	21.4776614376054	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGATATTTCACAAA	-154037562	True	NA	NA	False	AATAAA	-25	NA	154038910	153990147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038856
transcript_117255.known	chr5	-	3379	14	FSM	ENSG00000055147.19	ENST00000522858.5	3379	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	24.2904028093207	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATAGCAAAGCA	-154037518	True	NA	26	True	NA	NA	NA	154038866	153991702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_153993111_153994918_153994973_153997802_153997876_154002250_154002391_154002846_154002970_154011240_154011321_154026398_154026523_154027175_154027335_154028148_154028284_154029488_154029581_154033790_154033884_154034277_154034378_154034743_154034968_154038292
transcript_117256.known	chr5	+	5037	3	FSM	ENSG00000037749.13	ENST00000522782.6	5037	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	20	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTATAGTGTATGTTTC	154035069	True	NA	28	True	ATTAAA	-31	NA	154038966	154057450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154039012_154049556_154050018_154052919
transcript_11726.known	chr1	-	543	2	FSM	ENSG00000125462.19	ENST00000465270.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAATAGTGGTAGTGGATA	-156421498	True	NA	-3	True	AATAAA	-22	NA	156421752	156404256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156421554
transcript_117261.known	chr5	-	536	3	FSM	ENSG00000245275.8	ENST00000652895.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAAGGTGTAATTCCATC	-154445632	True	NA	NA	False	GATAAA	-20	NA	154445813	154408748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154409090_154443361_154443481_154445737
transcript_117270.nnic	chr5	+	617	3	NNC	ENSG00000155506.19	novel	6652	19	NA	NA	-27	-45968	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCATTGGTGAGATGA	154712427	True	NA	NA	False	ATTAAA	-17	NA	154712815	154740716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_154713131_154717742_154717843_154740514
transcript_117272.nnic	chr5	+	523	2	NNC	ENSG00000155506.19	novel	6652	19	NA	NA	-33	-45968	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTCATTGGTGAGATGA	154712421	True	NA	NA	False	ATTAAA	-17	NA	154712809	154740716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_154713131_154740514
transcript_117273.known	chr5	-	2947	9	FSM	ENSG00000170271.11	ENST00000326080.10	2947	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	3.56195171219375	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGTGGATAATTTTTTT	-154850381	True	NA	-4	True	AATAAA	-15	NA	154850603	154818491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154820473_154821259_154821427_154822471_154822578_154823386_154823593_154830800_154830923_154834624_154834729_154834842_154834935_154838130_154838179_154850482
transcript_117274.known	chr5	+	2708	8	FSM	ENSG00000155508.14	ENST00000517876.5	2708	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	149.795506867032	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856620	True	NA	14	True	AATAAA	-23	NA	154858251	154876792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858526_154858638_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_117278.known	chr5	+	2446	7	FSM	ENSG00000155508.14	ENST00000285896.11	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	50.1431284757277	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154855737	True	NA	14	True	AATAAA	-23	NA	154858626	154876792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_11728.known	chr1	-	725	4	FSM	ENSG00000125462.19	ENST00000497824.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	6.64997911442	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATAGTGGTAGTGGATAT	NA	False	NA	-2	True	AATAAA	-23	NA	156429579	156404255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156414653_156414754_156426797_156426873_156429375
transcript_117280.known	chr5	+	2604	7	FSM	ENSG00000155508.14	ENST00000403027.6	2604	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	133.578212627991	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTTTGGTCTTTCATA	154856885	False	NA	14	True	AATAAA	-23	NA	154858516	154876792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858817_154863206_154863396_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_117284.known	chr5	+	945	6	FSM	ENSG00000155508.14	ENST00000519404.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	157.58857826632	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTACTGTGCTGACTGT	154855762	True	NA	NA	False	NA	NA	NA	154858651	154875478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858769_154863206_154863396_154865191_154865386_154871729_154871875_154872540_154872652_154875289
transcript_117285.known	chr5	+	923	6	FSM	ENSG00000155508.14	ENST00000520671.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	164.7074983114	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCCTGATCCCAGAGTG	154855737	True	NA	NA	False	NA	NA	NA	154858626	154875458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858769_154865191_154865386_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_11729.known	chr1	-	473	3	FSM	ENSG00000125462.19	ENST00000400991.6	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGTAGTGGATATACCT	-156429301	True	NA	2	True	AATAAA	-27	NA	156429423	156404251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156426797_156426873_156429375
transcript_117291.known	chr5	+	1158	6	FSM	ENSG00000155508.14	ENST00000521450.5	1158	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	209.423398883697	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAATGGAACAAAATGG	154856885	False	NA	105	True	AATGAA	-42	NA	154858516	154875872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154858544_154858638_154858769_154870660_154870823_154871729_154871875_154872540_154872652_154875289
transcript_117293.known	chr5	-	5404	28	FSM	ENSG00000082516.9	ENST00000285873.8	5404	28	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_17	28.2139095369292	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATTCCTAATTTTGCA	-154933625	True	NA	-3	True	ATTAAA	-26	NA	154938211	154887410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_154888378_154889320_154889418_154891240_154891743_154892386_154892550_154896091_154896344_154898439_154898651_154899190_154899311_154901338_154901487_154902538_154902677_154903079_154903176_154904506_154904630_154905362_154905477_154907590_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_117294.nic	chr5	-	2327	16	ISM	ENSG00000082516.9	ENST00000285873.8	5404	28	-12	20338	-12	-16315	5prime_fragment	FALSE	canonical	3	135	junction_5	19.8691273643867	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACCTTGAGAACTCCTG	-154933637	True	NA	NA	False	AAAAAG	-9	NA	154938223	154907748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_154907819_154911726_154911899_154912898_154913039_154916997_154917180_154917930_154918005_154919966_154920104_154921342_154921426_154924468_154924555_154925861_154926075_154927384_154927551_154928526_154928660_154931457_154931578_154932098_154932251_154935840_154936023_154937024_154937186_154937967
transcript_11730.known	chr1	-	688	5	FSM	ENSG00000125462.19	ENST00000310027.9	688	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.29725975966321	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATTAATAGTGGTAGTG	-156429291	False	NA	-7	True	AATAAA	-18	NA	156429413	156404260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156404602_156407841_156407976_156414653_156414754_156426797_156426873_156429375
transcript_117302.known	chr5	+	784	6	FSM	ENSG00000082515.18	ENST00000439747.7	784	6	0	0	0	0	multi-exon	FALSE	canonical	3	1831	junction_1	75.5476008884465	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGCTTTTTATGATTT	154931708	True	NA	13	True	AATAAA	-13	NA	154941094	154966966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154941266_154950820_154950939_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_117303.known	chr5	+	511	5	FSM	ENSG00000082515.18	ENST00000519059.5	511	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	814.770328067978	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGAGGAGATTCAGACT	154931790	False	NA	-60	True	NA	NA	NA	154941176	154966893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_154941266_154956370_154956437_154957134_154957213_154959979_154960050_154966685
transcript_117308.nnic	chr5	-	552	3	NNC	ENSG00000145850.9	novel	581	5	NA	NA	13400	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGATGTCATTGATCCAGG	NA	False	NA	NA	False	CATAAA	-18	NA	156922276	156919354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_156919542_156920463_156920504_156921951
transcript_117311.known	chr5	-	1382	2	FSM	ENSG00000155868.8	ENST00000420343.1	1382	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAATAGCAAAGTTTTCGT	-157139252	True	NA	NA	False	AGTAAA	-18	NA	157142775	157138441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157139449_157142400
transcript_117312.known	chr5	-	2071	2	FSM	ENSG00000155868.8	ENST00000286317.6	2071	2	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_1	0	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGAGGGTTCTCTGGCT	-157139342	True	NA	NA	False	AATAAA	-39	NA	157142865	157137423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157139449_157142819
transcript_117318.known	chr5	+	6452	31	FSM	ENSG00000055163.20	ENST00000620254.5	6452	31	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_10	29.4843838139597	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACTTGGTCTTGATTCCT	157262345	True	NA	16	True	ATTAAA	-25	NA	157266122	157395594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237_157304367_157307760_157307866_157309742_157309835_157311663_157311782_157314343_157314464_157314968_157315095_157319761_157319929_157320654_157320803_157323920_157324075_157325481_157325639_157326170_157326268_157327972_157328050_157330741_157330851_157333326_157333447_157339056_157339257_157341069_157341158_157359004_157359149_157360281_157360373_157361467_157361599_157382589_157382663_157383264_157383360_157389188_157389428_157390520_157390669_157392832
transcript_11732.nic	chr1	-	595	4	ISM	ENSG00000183856.11	ENST00000361170.7	6013	38	-55	40478	-16	-28707	5prime_fragment	FALSE	canonical	3	26	junction_3	1.63299316185545	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGTCTTTGAACCAG	-156568429	True	NA	1	True	NA	NA	NA	156572620	156565882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_156566105_156566389_156566547_156569375_156569464_156572492
transcript_117321.known	chr5	+	1294	8	FSM	ENSG00000055163.20	ENST00000622696.4	1294	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	20.8375641962455	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGGGGAAGCAGGTGG	157262358	True	NA	NA	False	AATAAA	-21	NA	157266135	157304782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287109_157294782_157294861_157296672_157296775_157300714_157300897_157302793_157302891_157304237
transcript_117323.known	chr5	+	580	6	FSM	ENSG00000055163.20	ENST00000522637.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	143.606963619457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCTGCTGGCTGACATT	157262350	True	NA	NA	False	NA	NA	NA	157266127	157304274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157266196_157285338_157285479_157287018_157287075_157300714_157300897_157302793_157302891_157304237
transcript_117326.known	chr5	+	2885	6	FSM	ENSG00000113272.14	ENST00000231198.12	2885	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	7.73045923603508	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCTTTTTCATTTATTT	157730038	True	NA	5	True	AATAAA	-17	NA	157731419	157741449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157731632_157732867_157733045_157734575_157734746_157735845_157735935_157737886_157737995_157739320
transcript_117328.known	chr5	+	919	6	FSM	ENSG00000113272.14	ENST00000521655.1	919	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	45.2221184819995	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGTGCGAATGACA	157730038	True	NA	NA	False	NA	NA	NA	157731419	157739578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_157731632_157732867_157733045_157734670_157734746_157735845_157735935_157737886_157737995_157739320
transcript_117333.known	chr5	-	3952	12	FSM	ENSG00000113282.14	ENST00000411809.7	3952	12	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_2	157.433601378407	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTGTTTTAATTCTTT	-157843267	True	NA	NA	False	AGTAAA	-13	NA	157859145	157785746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789514_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_117335.known	chr5	-	2346	12	FSM	ENSG00000113282.14	ENST00000523908.5	2346	12	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	132.906292720202	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTGAGACCATTGAAAGC	-157843265	True	NA	-107	True	NA	NA	NA	157859143	157787404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_117336.known	chr5	-	3987	12	FSM	ENSG00000113282.14	ENST00000523094.5	3987	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	257.688613422486	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTAATTCTTTCTCT	-157843267	True	NA	NA	False	AGTAAA	-17	NA	157859145	157785742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858952
transcript_117344.nic	chr5	-	693	5	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-52	25707	-50	-21354	5prime_fragment	FALSE	canonical	3	786	junction_2	51.3955250970354	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTATGTTGGGGTTTC	-157843317	False	NA	NA	False	AAGAAA	-16	NA	157859195	157813111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157858929
transcript_117346.nic	chr5	-	446	3	ISM	ENSG00000113282.14	ENST00000523908.5	2346	12	-52	29351	-50	-24998	5prime_fragment	FALSE	canonical	3	818	junction_1	33.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGGAGAAGAGTTTATA	-157843317	False	NA	NA	False	NA	NA	NA	157859195	157816755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_157816831_157817442_157817548_157858929
transcript_117348.known	chr5	-	3344	12	FSM	ENSG00000113282.14	ENST00000530742.5	3344	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	260.422320709971	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGAACTGCTTTTTCTTT	-157843255	True	NA	-12	True	ATTAAA	-18	NA	157859133	157786286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_157787993_157789362_157789568_157791702_157791996_157794897_157794973_157803649_157803720_157805865_157806113_157809627_157809806_157813062_157813228_157814184_157814294_157816733_157816831_157817442_157817548_157859039
transcript_11735.known	chr1	-	6013	38	FSM	ENSG00000183856.11	ENST00000361170.7	6013	38	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_11	5.72615900976503	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTGTTAACCCTTAT	-156568374	True	NA	-18	True	AATAAA	-18	NA	156572565	156525404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156526600_156527951_156528061_156528508_156528611_156528915_156529083_156530104_156530318_156531159_156531248_156532979_156533107_156533772_156533876_156534008_156534142_156534500_156534734_156535162_156535248_156537180_156537322_156538808_156539034_156539373_156539538_156539837_156539991_156540707_156540917_156543980_156544051_156544151_156544224_156544388_156544473_156548072_156548244_156548347_156548488_156548580_156548749_156550260_156550352_156551704_156551869_156551973_156552096_156554234_156554393_156556532_156556694_156560933_156561022_156561837_156562002_156562586_156562666_156563133_156563313_156563552_156563667_156563756_156563825_156564614_156564692_156566026_156566105_156566389_156566547_156569375_156569464_156572492
transcript_117353.nnic	chr5	-	816	2	NNC	ENSG00000145860.12	novel	572	4	NA	NA	414	-21675	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	66	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAACAACATG	-159209127	False	2559	NA	False	AAGAAA	-8	NA	159209139	159203634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_159203657_159208345
transcript_117354.known	chr5	+	2179	11	FSM	ENSG00000164332.8	ENST00000296786.8	2179	11	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_8	16.4936351360153	563	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCGTTATCTGTTCTATA	159260742	True	NA	16	True	AATAAA	-16	NA	159263289	159286036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_159263361_159268869_159269070_159269907_159270000_159270359_159270446_159270527_159270644_159272022_159272122_159274584_159274623_159275147_159275247_159278237_159278355_159283211_159283340_159284903
transcript_117359.known	chr5	-	3373	2	FSM	ENSG00000170234.13	ENST00000307063.9	3373	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGTGTGTTTCTCA	-160115636	True	NA	-2	True	AATAAA	-17	NA	160119450	160091338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160094066_160118804
transcript_117360.known	chr5	+	1441	8	FSM	ENSG00000113312.12	ENST00000231238.10	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	77.8698547944857	4279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTGGGTTAGGTTGTGAA	159996365	True	NA	22	True	AATAAA	-16	NA	160009138	160065543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_117361.known	chr5	+	1283	7	FSM	ENSG00000113312.12	ENST00000684018.1	1283	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	272.161563536563	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTTTCTGTGCTTAGGTC	159996358	True	NA	6	True	NA	NA	NA	160009131	160065527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160051128_160051184_160064931
transcript_117362.known	chr5	+	1366	7	FSM	ENSG00000113312.12	ENST00000684137.1	1366	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	284.046015442725	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCTGTGGTAATAAAAGC	159996353	True	NA	-10	True	NA	NA	NA	160009126	160065511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160064931
transcript_117363.known	chr5	+	1342	8	FSM	ENSG00000113312.12	ENST00000682131.1	1342	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	266.705141782196	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	159996372	True	NA	16	True	AATAAA	-10	NA	160009145	160065537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010585_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_117364.known	chr5	+	2208	7	FSM	ENSG00000113312.12	ENST00000682151.1	2208	7	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_1	84.1044324370336	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	159996351	True	NA	NA	False	NA	NA	NA	160009124	160052548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128
transcript_117365.known	chr5	+	1485	8	FSM	ENSG00000113312.12	ENST00000682719.1	1485	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	267.049716383313	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	159996339	True	NA	16	True	AATAAA	-10	NA	160009112	160065537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010475_160010859_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_117366.known	chr5	+	1581	9	FSM	ENSG00000113312.12	ENST00000682172.1	1581	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	322.1187669168	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTAGGTCTGGGTTAGGT	159996362	True	NA	16	True	AATAAA	-10	NA	160009135	160065537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160009194_160010499_160010859_160018888_160019032_160035139_160035201_160036690_160036804_160043132_160043170_160049513_160049663_160051128_160051184_160064931
transcript_117371.known	chr5	+	769	6	FSM	ENSG00000170231.16	ENST00000523955.5	769	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	31.4197390186488	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	160213136	True	NA	8	True	AATAAA	-16	NA	160213726	160238716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160213820_160228472_160228693_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_117372.nnic	chr5	+	745	5	NNC	ENSG00000170231.16	novel	769	6	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	28.3846349280733	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	NA	False	NA	8	True	AATAAA	-16	NA	160213698	160238716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_160213820_160229377_160229625_160232097_160232274_160234819_160234910_160238605
transcript_117374.nnic	chr5	+	473	4	NIC	ENSG00000170231.16	novel	769	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	31.0948370133836	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	160213133	True	NA	8	True	AATAAA	-16	NA	160213723	160238716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_160213820_160232097_160232274_160234819_160234910_160238605
transcript_117375.known	chr5	+	756	7	FSM	ENSG00000170231.16	ENST00000393980.8	756	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	27.8353292697528	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTTTTTCTTTTCT	NA	False	NA	27	True	AATAAA	-35	NA	160187366	160238735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160187455_160199048_160199158_160213735_160213820_160229545_160229625_160232097_160232274_160234819_160234910_160238605
transcript_117376.known	chr5	+	496	4	FSM	ENSG00000170231.16	ENST00000402432.4	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	11.115554667022	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	NA	False	NA	8	True	AATAAA	-16	NA	160229505	160238716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160229625_160232097_160232274_160234819_160234910_160238605
transcript_117377.known	chr5	+	440	3	FSM	ENSG00000170231.16	ENST00000521362.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	13	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCTGCTCGCTCCAGAAC	NA	False	NA	8	True	AATAAA	-16	NA	160232034	160238716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160232274_160234819_160234910_160238605
transcript_117378.known	chr5	-	5709	6	FSM	ENSG00000135083.17	ENST00000257536.13	5709	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	23.1948270094864	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGATCTTTTATTTCTT	-160309831	True	NA	NA	False	ATTAAA	-16	NA	160312564	160249082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312363
transcript_117379.known	chr5	-	3118	6	FSM	ENSG00000135083.17	ENST00000644313.1	3118	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	72.3950274535482	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCACCTCTTGTCCTAGGC	NA	False	NA	-6	True	AATAAA	-21	NA	160312928	160251656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160253799_160255548_160255709_160259468_160259772_160280524_160280739_160311857_160311973_160312744
transcript_117383.known	chr5	-	2385	3	FSM	ENSG00000145861.9	ENST00000393975.4	2385	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAACAAAAAAAAAA	-160370538	True	NA	NA	False	NA	NA	NA	160370641	160347779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160349782_160354767_160355021_160370511
transcript_117384.known	chr5	-	2484	3	FSM	ENSG00000221886.4	ENST00000523213.1	2484	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTACTACTGCCTAGTT	-160398308	True	NA	-9	True	AATAAA	-17	NA	160400036	160393527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160395540_160397441_160397516_160399638
transcript_117386.known	chr5	-	2808	2	FSM	ENSG00000221886.4	ENST00000408953.4	2808	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTGTCATCTTTAA	-160398326	True	NA	-6	True	AATAAA	-17	NA	160400054	160393147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160395540_160399638
transcript_117398.known	chr5	-	3480	16	FSM	ENSG00000164609.10	ENST00000297151.9	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_10	24.2565913149853	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTTGTAGCATTATTTC	-160415827	True	NA	1	True	CATAAA	-20	NA	160419081	160401640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160403465_160404439_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_11740.known	chr1	-	1159	8	FSM	ENSG00000160818.17	ENST00000438976.6	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	192.284334531242	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGAAGCAGGAAAAGCA	-156595723	True	NA	-12	True	NA	NA	NA	156601470	156595212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599031_156601408
transcript_117402.nic	chr5	-	1624	15	ISM	ENSG00000164609.10	ENST00000297151.9	3480	16	-40	2871	-40	-1359	5prime_fragment	FALSE	canonical	3	174	junction_9	25.1076254779869	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAGCATCGAAA	-160415867	True	NA	NA	False	AAAAAG	-1	NA	160419121	160404511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_160404557_160404808_160404881_160405030_160405136_160406467_160406630_160407475_160407616_160407745_160407814_160407970_160408069_160408328_160408461_160408649_160408698_160412450_160412520_160413455_160413621_160413898_160413980_160414318_160414473_160415124_160415311_160419022
transcript_117406.known	chr5	-	807	3	FSM	ENSG00000164609.10	ENST00000520664.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	93.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAGGGGTGTAAAAGAGG	-160415827	True	NA	NA	False	AAAACA	-31	NA	160419081	160414337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_160414473_160415124_160415311_160418595
transcript_117412.known	chr5	+	895	6	FSM	ENSG00000164611.13	ENST00000520452.5	895	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	1750.39195610583	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATTTGTATTAATAAA	160397331	True	NA	3	True	TTTAAA	-23	NA	160421903	160428704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160422156_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_117413.known	chr5	+	670	6	FSM	ENSG00000164611.13	ENST00000519287.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_1	1751.17555944571	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397634	False	NA	28	True	AATAAA	-16	NA	160422206	160428739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160422237_160422339_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_117417.known	chr5	+	715	6	FSM	ENSG00000164611.13	ENST00000352433.10	715	6	0	0	0	0	multi-exon	FALSE	canonical	3	2919	junction_1	673.76001662313	31642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397282	True	NA	28	True	AATAAA	-16	NA	160421854	160428739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160421892_160422301_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_117418.known	chr5	+	1070	5	FSM	ENSG00000164611.13	ENST00000393964.1	1070	5	0	0	0	0	multi-exon	FALSE	canonical	3	3751	junction_4	394.274254168339	4215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTCCTAGTATTGTGGTT	160397337	True	NA	28	True	AATAAA	-16	NA	160421909	160428739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_160422404_160422708_160422894_160424236_160424331_160427714_160427874_160428601
transcript_117421.known	chr5	+	11548	9	FSM	ENSG00000113327.17	ENST00000639111.2	11548	9	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTGTTTAATGTCTACA	NA	False	NA	NA	False	AATAAA	-20	NA	162067464	162162977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_162068107_162093827_162093980_162095494_162095563_162097637_162097859_162101234_162101318_162103888_162104027_162142163_162142317_162149107_162149314_162153092
transcript_117426.nnic	chr5	+	476	3	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-311	-48151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAAACTTTTATTCC	162036243	True	NA	4	True	AATAAA	-17	NA	162036459	162046609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036608_162036837_162036955_162046398
transcript_117427.nnic	chr5	+	458	3	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-311	-33044	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAGAAAGAA	162036243	True	NA	NA	False	AAAAAG	-14	NA	162036459	162061716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036608_162036837_162036955_162061523
transcript_117431.nnic	chr5	+	699	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-322	-33044	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAGAAAGAAAGAA	162036232	True	NA	NA	False	AAAAAG	-14	NA	162036448	162061716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036955_162061523
transcript_117432.nnic	chr5	+	972	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-448	-32897	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGAAGTTGTCATTC	NA	False	NA	NA	False	AAGAAA	-30	NA	162036322	162061863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036955_162061523
transcript_117433.nnic	chr5	+	675	2	NNC	ENSG00000113327.17	novel	429	4	NA	NA	-280	-48151	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTAAACTTTTATTCC	162036274	True	NA	4	True	AATAAA	-17	NA	162036490	162046609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_162036955_162046398
transcript_117442.nnic	chr5	-	691	4	NNC	ENSG00000254186.3	novel	2798	15	NA	NA	-20	-166033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCTTTTATTGTGGAAT	-163437320	False	NA	NA	False	ATTAAA	-17	NA	163437346	163422883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_163423200_163425802_163425921_163428940_163429034_163437182
transcript_117443.nnic	chr5	-	384	2	NNC	ENSG00000254186.3	novel	2798	15	NA	NA	8	-44555	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGTTTTCATGTAT	-163437139	True	NA	1	True	AATAAA	-20	NA	163437318	163301405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_163301654_163437182
transcript_117451.known	chr5	+	2444	7	FSM	ENSG00000113328.19	ENST00000340828.7	2444	7	0	0	0	0	multi-exon	FALSE	canonical	3	3201	junction_3	162.618162167289	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGCTGGGTGGCTTTT	163430162	True	NA	15	True	AATAAA	-16	NA	163437594	163445016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_117458.known	chr5	+	1071	6	FSM	ENSG00000113328.19	ENST00000511683.6	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	1331.07093725316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTCCTACTTAAATTTTAA	163437689	True	NA	NA	False	NA	NA	NA	163437765	163444078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163437805_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_117460.known	chr5	+	2366	8	FSM	ENSG00000113328.19	ENST00000393929.5	2366	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	1223.54516692691	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCCTTTGCTGGGTGGCTT	163430138	True	NA	13	True	AATAAA	-14	NA	163437570	163445014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163437665_163437764_163437805_163439256_163439521_163441077_163441332_163441885_163441965_163442044_163442144_163442373_163442569_163443673
transcript_117481.known	chr5	-	448	4	FSM	ENSG00000170584.11	ENST00000517501.1	448	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	596.159001907675	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTTAATCAGATAAACAGAT	-163450222	True	NA	NA	False	NA	NA	NA	163460055	163453922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_163454051_163456928_163457006_163457561_163457611_163459861
transcript_117482.known	chr5	+	2988	18	FSM	ENSG00000072571.20	ENST00000358715.3	2988	18	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	124.189970564967	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTTTCAGCTTGTATT	163452171	True	NA	17	True	AATAAA	-26	NA	163460656	163491941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163467703_163467749_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_117487.known	chr5	+	2872	17	FSM	ENSG00000072571.20	ENST00000353866.7	2872	17	0	0	0	0	multi-exon	TRUE	canonical	3	207	junction_3	80.4879649388652	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGATAATGCTCACTT	163460334	False	NA	NA	False	AAAACA	-27	NA	163460365	163491579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163460739_163463855_163463955_163464722_163464803_163469640_163469830_163471184_163471272_163471362_163471464_163473178_163473254_163473378_163473558_163474056_163474206_163475457_163475673_163478683_163478801_163482641_163482789_163483019_163483173_163483267_163483368_163484068_163484246_163490389_163490553_163491111
transcript_117500.known	chr5	+	2226	7	FSM	ENSG00000038274.17	ENST00000280969.9	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	108.294993215548	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAACTTACCACCCCATC	163503093	True	NA	18	True	AATAAA	-30	NA	163503113	163519336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163503425_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_117508.known	chr5	+	2064	7	FSM	ENSG00000038274.17	ENST00000321757.11	2064	7	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	143.033115823652	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAATGTTACAGTTAC	163500213	True	NA	36	True	AATAAA	-38	NA	163505618	163519354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_163505750_163512001_163512197_163513554_163513670_163513841_163513995_163516517_163516712_163517560_163517675_163518192
transcript_117509.known	chr5	+	295	1	FSM	ENSG00000229119.3	ENST00000518938.1	295	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTAATCACCAAAAAGCAAC	NA	False	NA	NA	False	NA	NA	NA	166382304	166382599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_166382300_166382600
transcript_117511.nnic	chr5	-	1627	5	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-86	465	multi-exon	FALSE	canonical	2	5	junction_2	2.58602010819715	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	NA	False	NA	NA	False	AATAAA	-20	NA	167303458	167286854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167294250_167294401_167297462_167297551_167303122
transcript_117513.nnic	chr5	-	1398	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-7	465	multi-exon	FALSE	canonical	0	0	junction_2	5.24933858267454	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCAGTCCTTGGTTTTATT	-167303272	True	NA	NA	False	AATAAA	-20	NA	167303379	167286854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167297462_167297551_167303122
transcript_117517.nnic	chr5	-	1019	4	Fusion	ENSG00000254365.1_ENSG00000254297.1	novel	523	2	NA	NA	-86	7	multi-exon	FALSE	canonical	0	0	junction_2	5.24933858267454	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTGTTATTACTGAGTGT	NA	False	NA	NA	False	AATAAA	-28	NA	167303458	167287312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr5_-_167287820_167291941_167292030_167297462_167297551_167303122
transcript_117519.known	chr5	-	648	3	FSM	ENSG00000254297.1	ENST00000523497.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCAGGGTGAACACAAAGA	-167303265	True	NA	NA	False	NA	NA	NA	167303372	167296233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_167296544_167297462_167297551_167303122
transcript_117523.nnic	chr5	-	808	5	NNC	ENSG00000253978.2	novel	503	3	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.0178344238091	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168269481	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168231238_168231321_168232303_168232373_168269273
transcript_117524.nnic	chr5	-	831	5	NNC	ENSG00000253978.2	novel	503	3	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.0178344238091	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168269481	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168231238_168231321_168232303_168232396_168269273
transcript_117529.nnic	chr5	-	765	4	NNC	ENSG00000253978.2	novel	590	3	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.58653778449403	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168269507	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168231238_168231321_168269273
transcript_117530.nnic	chr5	-	726	4	NNC	ENSG00000253978.2	novel	503	3	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.9566858950296	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168269481	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168232303_168232373_168269273
transcript_117532.nnic	chr5	-	715	4	NNC	ENSG00000253978.2	novel	590	3	NA	NA	-66	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.73053390247253	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168269481	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168233759_168233818_168269273
transcript_117533.nnic	chr5	-	812	4	NNC	ENSG00000253978.2	novel	590	3	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.33999733546454	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	-168269115	True	NA	-7	True	GATAAA	-22	NA	168269463	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_168229861_168230885_168231057_168263259_168263433_168269273
transcript_117534.known	chr5	-	590	3	FSM	ENSG00000253978.2	ENST00000655017.1	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	6.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGACTTCCTAGTGCTT	-168269067	True	NA	-8	True	GATAAA	-21	NA	168269415	168229583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_168229861_168230885_168231057_168269273
transcript_117535.known	chr5	-	503	3	FSM	ENSG00000253978.2	ENST00000519795.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTAGTGCTTG	NA	False	NA	-7	True	GATAAA	-22	NA	168232357	168229582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_168229861_168230885_168231057_168232303
transcript_117538.known	chr5	+	2122	15	FSM	ENSG00000113643.9	ENST00000231572.8	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	771	junction_4	64.9720897692201	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTGGTTCTTTAACA	168477042	True	NA	28	True	AGTAAA	-19	NA	168486470	168519301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168493893_168494003_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_117539.known	chr5	+	1990	14	FSM	ENSG00000113643.9	ENST00000520013.5	1990	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	239.261734330404	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAATGTGGTTCTTTA	168477062	True	NA	25	True	AGTAAA	-16	NA	168486490	168519298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168486544_168488601_168488737_168492658_168492848_168494549_168494651_168495314_168495437_168497227_168497349_168500590_168500721_168502000_168502106_168506020_168506200_168506721_168506832_168510580_168510687_168516777_168516951_168517814_168518063_168519080
transcript_117540.known	chr5	+	757	3	FSM	ENSG00000113643.9	ENST00000524082.5	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_2	13.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCCAATTAAATATTTGAT	168477022	True	NA	NA	False	ATTAAA	-22	NA	168486450	168493187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168486544_168488601_168488737_168492658
transcript_117541.known	chr5	-	10274	7	FSM	ENSG00000120137.7	ENST00000239231.7	10274	7	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	19.0146142626022	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCCTTTTTATTATTT	-168573221	False	6147	-2	True	AATAAA	-20	NA	168579368	168548494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_168557622_168559031_168559158_168561392_168561517_168563888_168564066_168566012_168566267_168568645_168568999_168579255
transcript_117547.nnic	chr5	+	712	2	Genic_Genomic	ENSG00000233913.7	novel	645	1	NA	NA	-44	74	multi-exon	FALSE	canonical	0	0	junction_1	0	2496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAGATGTGCT	NA	False	NA	NA	False	AATAAA	-32	NA	168616307	168617070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr5_+_168616701_168616751
transcript_117550.known	chr5	+	645	1	FSM	ENSG00000233913.7	ENST00000522551.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4148	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	168616257	False	NA	NA	False	NA	NA	NA	168616351	168616996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_168616400_168617000
transcript_11756.known	chr1	+	1111	6	FSM	ENSG00000163382.13	ENST00000368235.8	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	1832	junction_5	53.9874059387928	3789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTTGTGCTGTCCTTTA	156575942	True	NA	33	True	AATGAA	-21	NA	156591775	156594299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593881
transcript_117560.known	chr5	+	2529	12	FSM	ENSG00000040275.17	ENST00000265295.9	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_6	38.8770046120236	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576458	True	NA	38	True	AATAAA	-23	NA	169583772	169604778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596560_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_117562.nic	chr5	+	2636	12	NIC	ENSG00000040275.17	novel	2529	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	112.011584406803	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTACTCTCTATAGGTA	169576327	True	NA	38	True	AATAAA	-23	NA	169583641	169604778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_169583890_169588393_169588576_169591047_169591225_169593353_169593549_169594144_169594295_169594393_169594493_169594570_169594682_169596584_169596702_169598475_169598580_169598971_169599160_169601279_169601626_169604059
transcript_117573.known	chr5	+	637	4	FSM	ENSG00000040275.17	ENST00000513795.1	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	207.094717996916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCAGAGATGCTGGCTC	169584006	False	NA	NA	False	NA	NA	NA	169584028	169593493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_169584167_169588393_169588576_169591047_169591225_169593353
transcript_117574.nnic	chr5	+	708	5	NNC	ENSG00000234511.10	novel	567	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.49583217528247	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	170232925	170246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170233008_170234114_170234199_170234976_170235071_170236079_170236258_170245961
transcript_117577.known	chr5	+	471	4	FSM	ENSG00000234511.10	ENST00000593851.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.39934634239519	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	170232880	True	NA	NA	False	AATAAA	-18	NA	170232984	170246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170233008_170234114_170234199_170234976_170235071_170245961
transcript_117579.nnic	chr5	+	624	4	NNC	ENSG00000234511.10	novel	471	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.05480466765633	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	170232925	170246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170233008_170234976_170235071_170236079_170236258_170245961
transcript_117582.nic	chr5	+	446	3	NIC	ENSG00000234511.10	novel	471	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	170232925	170246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_170233008_170234976_170235071_170245961
transcript_117584.nnic	chr5	+	355	3	Antisense	novelGene_ENSG00000043462.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAAATTGTTTGTTTGTT	NA	False	NA	1	True	AATAAA	-20	NA	170278179	170279694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_+_170278277_170278643_170278772_170279564
transcript_117586.nnic	chr5	+	523	2	NNC	ENSG00000234511.10	novel	2113	3	NA	NA	10355	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	NA	False	NA	NA	False	AATAAA	-18	NA	170245286	170246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170245540_170245961
transcript_117587.nnic	chr5	+	414	2	NNC	ENSG00000234511.10	novel	2113	3	NA	NA	10379	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGTTCTTGAAGGCTG	170245274	True	NA	NA	False	AATAAA	-18	NA	170245310	170246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170245455_170245961
transcript_117588.nnic	chr5	-	584	2	Intergenic	novelGene_52	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTTTTTTATTTTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	170337043	170335510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr5_-_170335855_170336803
transcript_11759.known	chr1	+	901	6	FSM	ENSG00000163382.13	ENST00000368234.7	901	6	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_4	764.197252023324	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGAACTGTGGATTCC	156575928	True	NA	15	True	AATAAA	-17	NA	156591761	156594131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593463_156593556_156593881
transcript_117591.known	chr5	-	4742	4	FSM	ENSG00000145936.9	ENST00000274629.9	4742	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	2.49443825784929	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTAGTGCTTCCATCAT	-170389328	True	NA	NA	False	AATAAA	-16	NA	170389367	170374670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_170378974_170383678_170383851_170385313_170385472_170389258
transcript_117593.known	chr5	+	1284	10	FSM	ENSG00000094755.17	ENST00000519598.1	1284	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	11.895636714338	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGTTTTATATTAATAT	170783162	True	NA	NA	False	AAAACA	-13	NA	170783746	170810076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170809982
transcript_117594.known	chr5	+	3304	10	FSM	ENSG00000094755.17	ENST00000265294.9	3304	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	10.2354986248236	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	170783140	True	NA	11	True	AATAAA	-26	NA	170783724	170814047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170809567_170809756_170811955
transcript_117601.known	chr5	+	1567	9	FSM	ENSG00000094755.17	ENST00000519385.5	1567	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	7.08872343937891	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTCCCATGGAGCCCAAG	170783140	True	NA	NA	False	AATAGA	-36	NA	170783724	170812498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170808599_170808753_170811955
transcript_117605.nnic	chr5	+	2974	8	NIC	ENSG00000094755.17	novel	3304	10	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_7	9.98570406702931	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGTGGTCATCTATACAA	170783129	True	NA	11	True	AATAAA	-26	NA	170783713	170814047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_170783875_170788573_170788669_170789128_170789248_170794230_170794299_170795207_170795426_170797465_170797549_170805715_170805854_170811955
transcript_117622.nnic	chr5	-	1437	4	NNC	ENSG00000253348.1	novel	602	3	NA	NA	-3229	1675	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	4.71404520791032	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGTTTCTTGGTCTAT	-170760982	False	NA	0	True	AATAGA	-18	NA	170761408	170745371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_170746112_170746910_170747194_170757860_170757979_170761112
transcript_117634.known	chr5	+	1199	7	FSM	ENSG00000204764.14	ENST00000443155.5	1199	7	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_6	14.3643076176102	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAACTTTCAGACTTTCA	170859078	True	NA	NA	False	NA	NA	NA	170861869	170911409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660_170909766_170910968
transcript_117635.nnic	chr5	+	2458	6	NNC	ENSG00000204764.14	novel	2182	6	NA	NA	-43	-6247	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_5	27.7820085666965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTTTTTCACTTTAT	170859183	True	NA	NA	False	AATAAA	-22	NA	170861974	170905095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170903185
transcript_117637.nnic	chr5	+	801	5	NIC	ENSG00000204764.14	novel	1199	7	NA	NA	-43	7	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	29.4480474734744	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGACTGCACTAGAGCTA	170859183	True	NA	NA	False	AAAAAG	-7	NA	170861974	170911349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_170862052_170878096_170878244_170881805_170881897_170909660_170909766_170910968
transcript_117640.known	chr5	+	2182	6	FSM	ENSG00000204764.14	ENST00000519130.5	2182	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	11.9063008529098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAACAAGGACTGCACT	170859231	True	NA	NA	False	NA	NA	NA	170862022	170911342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170862052_170878096_170878244_170881805_170881897_170892386_170892554_170896049_170896116_170909660
transcript_117641.known	chr5	+	414	3	FSM	ENSG00000204764.14	ENST00000523727.1	414	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTGTGTGTGTATCTG	NA	False	NA	NA	False	CATAAA	-16	NA	170881838	170896238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_170881897_170892386_170892554_170896049
transcript_117674.known	chr5	+	1338	12	FSM	ENSG00000181163.14	ENST00000517671.5	1338	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6262.79018693903	10819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACGGTTTCTATTGACTT	171387030	True	NA	12	True	AATAAA	-21	NA	171387115	171410883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171387235_171387932_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_11769.known	chr1	+	1012	5	FSM	ENSG00000163382.13	ENST00000368233.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	1915	junction_4	31.9570023625496	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGATGGGACGTGGAGA	156575944	True	NA	NA	False	NA	NA	NA	156591777	156593876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407
transcript_117715.known	chr5	+	2258	11	FSM	ENSG00000181163.14	ENST00000677325.1	2258	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	6517.66865988138	12023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTCCTTTTTGTTTAA	171388515	False	NA	-62	True	NA	NA	NA	171388611	171411810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117763.known	chr5	+	1237	10	FSM	ENSG00000181163.14	ENST00000351986.10	1237	10	0	0	0	0	multi-exon	FALSE	canonical	3	848	junction_7	6494.67981894545	14670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	170933662	True	NA	13	True	AATAAA	-22	NA	171387828	171410884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171405301_171405404_171407699_171407775_171410526
transcript_117764.known	chr5	+	1346	12	FSM	ENSG00000181163.14	ENST00000677357.1	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_9	8314.60587915145	7007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	170933676	True	NA	16	True	AATAAA	-25	NA	171387842	171410887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407128_171407162_171407699_171407775_171410526
transcript_117765.known	chr5	+	2600	11	FSM	ENSG00000181163.14	ENST00000677467.1	2600	11	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_9	6010.28371709689	14388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATAAAACTCAGTATTTT	170933660	True	NA	-16	True	AATATA	-6	NA	171387826	171410855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_117766.known	chr5	+	268	2	FSM	ENSG00000181163.14	ENST00000523339.1	268	2	0	0	0	0	multi-exon	FALSE	canonical	3	21912	junction_1	0	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTCAGCCTTTTA	170933685	True	NA	72	True	AATAAA	-12	NA	171387851	171390163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050
transcript_117767.known	chr5	+	1289	11	FSM	ENSG00000181163.14	ENST00000678774.1	1289	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6541.10403525276	3257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392983_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117768.known	chr5	+	1263	10	FSM	ENSG00000181163.14	ENST00000521672.6	1263	10	0	0	0	0	multi-exon	FALSE	canonical	1	249	junction_1	6784.13505135782	1905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	171387757	False	NA	2	True	AATAAA	-11	NA	171387798	171410873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117769.known	chr5	+	794	5	FSM	ENSG00000181163.14	ENST00000679190.1	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9049.40515655587	4926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTTCTATTGACTTATTT	170933651	True	NA	16	True	AATAAA	-25	NA	171387817	171410887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391413_171407718_171407775_171410526
transcript_117770.known	chr5	+	1072	8	FSM	ENSG00000181163.14	ENST00000679233.1	1072	8	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_6	9308.3274391421	3217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGACAATAATTTTGAA	170933676	True	NA	37	True	AATAAA	-26	NA	171387842	171406736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171405301_171405404_171406396
transcript_117771.known	chr5	+	3605	10	FSM	ENSG00000181163.14	ENST00000676625.1	3605	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1218.52367667489	6011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933661	True	NA	-3	True	AATAAA	-6	NA	171387827	171410868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171407775_171410526
transcript_117772.known	chr5	+	1936	10	FSM	ENSG00000181163.14	ENST00000676504.1	1936	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_5	1174.33121497691	3602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATAAAGTAGCACGG	170933664	True	NA	-1	True	AATAAA	-8	NA	171387830	171410870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117773.known	chr5	+	1382	10	FSM	ENSG00000181163.14	ENST00000518587.2	1382	10	0	0	0	0	multi-exon	FALSE	canonical	3	20235	junction_9	888.46209198192	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTTAATAAAGTAGCAC	170933685	True	NA	-3	True	AATAAA	-6	NA	171387851	171410868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117774.known	chr5	+	2459	10	FSM	ENSG00000181163.14	ENST00000677741.1	2459	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_4	1161.6792230577	1853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	170933690	True	NA	2	True	AATAAA	-11	NA	171387856	171410873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117775.known	chr5	+	1571	10	FSM	ENSG00000181163.14	ENST00000521260.2	1571	10	0	0	0	0	multi-exon	FALSE	canonical	3	19066	junction_4	1073.09750112167	2069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATAAAGTAGCACGGTTT	170933685	True	NA	2	True	AATAAA	-11	NA	171387851	171410873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390050_171390131_171391304_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171407699_171407775_171410526
transcript_117776.known	chr5	+	2627	11	FSM	ENSG00000181163.14	ENST00000677672.1	2627	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	8280.2979632378	1719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGGTTTCTATTGACTTA	171388523	False	NA	13	True	AATAAA	-22	NA	171388619	171410884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388798_171390050_171390131_171391304_171391425_171391705_171391800_171392709_171392817_171392913_171392979_171400152_171400211_171400838_171400926_171405301_171405404_171406396_171407775_171410526
transcript_117777.known	chr5	+	247	3	FSM	ENSG00000181163.14	ENST00000523622.1	247	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10192	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCAGTCCAATTAAAGTAA	170933714	True	NA	NA	False	AATGAA	-7	NA	171387880	171391369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_171388007_171390074_171390131_171391304
transcript_117780.known	chr5	-	5892	19	FSM	ENSG00000072786.13	ENST00000176763.10	5892	19	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_9	10.046957650189	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCGTTCAGGTTGTTCT	-172186817	True	NA	NA	False	AATAAA	-13	NA	172188224	172042078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172045023_172052928_172053043_172054568_172054695_172055587_172055777_172057348_172057474_172061138_172061269_172064719_172064813_172082325_172082506_172082960_172083085_172090231_172090363_172093411_172093961_172096425_172096561_172105655_172105738_172106619_172106815_172107779_172107853_172117480_172117631_172127372_172127422_172156623_172156789_172187886
transcript_117781.known	chr5	-	2988	3	FSM	ENSG00000168246.6	ENST00000393792.3	2988	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	11	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTGTCTTTGCCTTTA	-172283676	False	1756	-8	True	AAAAAG	-11	NA	172283764	172209645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172212228_172234121_172234359_172283595
transcript_117783.known	chr5	-	1394	13	FSM	ENSG00000174705.13	ENST00000519643.5	1394	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.3406820183757	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCATTTCAGTCATTTT	-172454337	False	NA	NA	False	AATACA	-4	NA	172454358	172325180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172325381_172346135_172346262_172347282_172347333_172350362_172350590_172353887_172354006_172358772_172358878_172362734_172362870_172373789_172373816_172382035_172382128_172394562_172394640_172406276_172406353_172422415_172422497_172454277
transcript_117785.known	chr5	+	1297	2	FSM	ENSG00000287814.1	ENST00000660356.1	1297	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTAGCCTTTTGTGTCTTGC	172479257	False	NA	NA	False	AATAAA	-16	NA	172479273	172536444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172479605_172535478
transcript_117786.known	chr5	-	192	1	FSM	ENSG00000253683.1	ENST00000520566.1	192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	166	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGCTGTTCCTTGTGCCTG	-172656662	True	NA	NA	False	AAAAAG	-1	NA	172656713	172656521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172656500_172656700
transcript_117787.known	chr5	-	2013	4	FSM	ENSG00000120129.6	ENST00000239223.4	2013	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAACGCTTTTATTTCTT	-172770330	True	NA	-4	True	AATAAA	-21	NA	172771195	172768095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_172769133_172769574_172769795_172770160_172770307_172770585
transcript_117788.known	chr5	+	2903	10	FSM	ENSG00000113719.17	ENST00000393784.8	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	27.9329001999479	784	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGGTGTGATTCTTTC	172821371	True	NA	18	True	ATTAAA	-18	NA	172834250	172952683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172834434_172888698_172888761_172897001_172897075_172909666_172909762_172914713_172914839_172924004_172924110_172926508_172926570_172932435_172932537_172935187_172935311_172950708
transcript_117790.known	chr5	+	695	4	FSM	ENSG00000037241.7	ENST00000519974.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	450.331236116508	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCCACATAGTATTT	172958711	False	NA	18	True	AATAAA	-15	NA	172958728	172969716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172958802_172959864_172960042_172968458_172968600_172969412
transcript_117792.known	chr5	+	742	4	FSM	ENSG00000037241.7	ENST00000521476.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	442.362596369389	747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACATAGTATTTGCATT	172958688	True	NA	23	True	AATAAA	-20	NA	172958892	172969721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172959008_172959864_172960042_172968458_172968600_172969412
transcript_117793.known	chr5	+	679	4	FSM	ENSG00000037241.7	ENST00000519239.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	420.340602633415	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTCCACATAGTATTTGC	172950081	True	NA	20	True	AATAAA	-17	NA	172959459	172969718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172959515_172959864_172960042_172968458_172968600_172969412
transcript_117795.known	chr5	+	722	4	FSM	ENSG00000037241.7	ENST00000265100.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	213.674726837052	3924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTTTGCCAGTCTTTT	172950045	True	NA	17	True	AATAAA	-17	NA	172959423	172969771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172959469_172959864_172960042_172968458_172968600_172969412
transcript_117799.known	chr5	+	773	3	FSM	ENSG00000113732.9	ENST00000265093.4	773	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	650.5	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGCTCGGTGTTTGTAA	172973774	True	NA	30	True	AATAAA	-24	NA	172983815	173034892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_173020237_173020368_173034398
transcript_117800.known	chr5	+	1419	4	FSM	ENSG00000113732.9	ENST00000519374.6	1419	4	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_2	46.2625358386483	5776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCTCATGGCTTTTTGAC	172973729	True	NA	NA	False	ATTAAA	-25	NA	172983770	173035445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_172994774_172994823_173020237_173020368_173034398
transcript_117801.known	chr5	+	718	3	FSM	ENSG00000113732.9	ENST00000519911.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	691.5	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAATCTGGGCTCGGT	172973739	True	NA	22	True	AATAAA	-16	NA	172983780	173034884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_172994774_172994823_173034398
transcript_117802.known	chr5	+	502	3	FSM	ENSG00000113732.9	ENST00000517669.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_2	50.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCTGCTATCACCCTGC	172973789	True	NA	NA	False	NA	NA	NA	172983830	173020557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_172983965_172994774_172994823_173020237
transcript_117803.known	chr5	+	7778	9	FSM	ENSG00000164463.12	ENST00000296953.6	7778	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	4.76805778069016	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTGAATTGTTTGCCTC	173056177	True	NA	NA	False	AATAAA	-18	NA	173056351	173139284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314_173091402_173108623_173108819_173110521_173110712_173112305_173112380_173123079_173123203_173133629
transcript_117807.known	chr5	+	1660	4	FSM	ENSG00000164463.12	ENST00000520420.5	1660	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	4.54606056566195	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGTAATTGGTTTTTCTA	173056193	True	NA	NA	False	ATTAAA	-21	NA	173056367	173091536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173056480_173080584_173080785_173086500_173086627_173090314
transcript_117809.known	chr5	+	1339	7	FSM	ENSG00000113734.18	ENST00000231668.13	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	89.5812790462134	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGATTTTATTTAATAGA	NA	False	NA	-11	True	AAGAAA	-34	NA	173144441	173164340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173151565_173151695_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_117811.known	chr5	+	1168	6	FSM	ENSG00000113734.18	ENST00000351486.10	1168	6	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	11.7711511756497	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTGGGAATGTGTGTT	173143178	True	NA	36	True	AATAAA	-23	NA	173144530	173164387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173158743_173158846_173159932_173160052_173163724
transcript_117813.known	chr5	+	721	5	FSM	ENSG00000113734.18	ENST00000393770.4	721	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	93.2104473758173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCACTTTTCTGCAAGTA	173143193	True	NA	NA	False	NA	NA	NA	173144545	173164057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173144630_173146865_173146959_173154321_173154414_173159932_173160052_173163724
transcript_117816.known	chr5	-	496	2	FSM	ENSG00000253172.1	ENST00000521251.1	496	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATATTTTTAATATTTT	NA	False	NA	NA	False	NA	NA	NA	173145039	173144161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173144578_173144959
transcript_117818.known	chr5	-	4254	4	FSM	ENSG00000113739.11	ENST00000265087.9	4254	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_2	14.3372087784044	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCACTTGAGTAGCGTCAT	-173326166	True	NA	-34	True	AATAAA	-18	NA	173328414	173314722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173318250_173323218_173323431_173325867_173326011_173328042
transcript_117819.known	chr5	-	582	2	FSM	ENSG00000113739.11	ENST00000519511.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGAGCATACATGATTGAA	-173326199	True	NA	NA	False	NA	NA	NA	173328447	173325833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173326011_173328042
transcript_11782.known	chr1	+	6317	5	FSM	ENSG00000163382.13	ENST00000680529.1	6317	5	0	0	0	0	multi-exon	FALSE	canonical	3	1832	junction_4	58.0791485819136	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATCACTTGAGCCCAGGAG	156575942	True	NA	NA	False	NA	NA	NA	156591775	156599350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592476_156592556_156592671_156593407_156593556_156593881
transcript_117820.known	chr5	-	1921	4	FSM	ENSG00000145919.11	ENST00000311086.9	1921	4	0	0	0	0	multi-exon	FALSE	canonical	3	665	junction_2	76.8678519712023	996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCCTTGGATAATATA	-173606999	True	NA	-39	True	NA	NA	NA	173616650	173607144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173608293_173609237_173609435_173613130_173613256_173616199
transcript_117821.known	chr5	-	1286	3	FSM	ENSG00000145919.11	ENST00000285908.5	1286	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	351.5	949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCGAAGCTTCAGCTGAAG	-173606937	True	NA	-5	True	AATAAA	-39	NA	173616588	173607520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_173608293_173613130_173613256_173616199
transcript_117826.known	chr5	+	1348	8	FSM	ENSG00000113742.14	ENST00000519467.1	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTTTATTAAAATAACCA	173917537	True	NA	NA	False	ATTAAA	-29	NA	173918215	173956514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173918255_173943025_173943050_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_117828.known	chr5	+	1670	7	FSM	ENSG00000113742.14	ENST00000657000.1	1670	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.97217382873427	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGAGCTAGGTTTATTTT	173917522	True	NA	NA	False	AATAAA	-18	NA	173918200	173956845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173918255_173944966_173945141_173949507_173949598_173949959_173950079_173951823_173951939_173953090_173953273_173955909
transcript_117831.known	chr5	+	2511	5	FSM	ENSG00000185056.10	ENST00000340147.7	2511	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGTCCTGCCTTCTCTT	NA	False	NA	NA	False	ATTAAA	-15	NA	173989169	174006140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_173989589_173998152_173998239_173999699_173999800_174001195_174001232_174004270
transcript_117843.known	chr5	+	4066	11	FSM	ENSG00000164466.13	ENST00000321442.10	4066	11	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_10	71.5558523113239	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTTTTATTTGTACA	175468166	True	NA	NA	False	AATAAA	-18	NA	175478559	175529742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450_175511527_175512110_175512197_175513462_175513591_175516613_175516664_175521918_175521969_175522374_175522423_175526637
transcript_117844.known	chr5	+	637	5	FSM	ENSG00000164466.13	ENST00000502393.5	637	5	0	0	0	0	multi-exon	FALSE	canonical	3	713	junction_2	27.2247589521009	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTAAATCCCTCTATT	175468181	True	NA	NA	False	AATAAA	-26	NA	175478574	175511579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094_175492268_175509031_175509203_175510108_175510208_175511450
transcript_117845.known	chr5	+	592	3	FSM	ENSG00000164466.13	ENST00000508290.5	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	354	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAAAATTGAAGACAA	175468170	True	NA	NA	False	AAAACA	-31	NA	175478563	175509403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175478640_175492094_175492268_175509060
transcript_117849.nnic	chr5	+	721	4	NNC	ENSG00000113749.8	novel	2561	3	NA	NA	-12	-3139	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	1.69967317119759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAACTGGACACATT	175657538	True	NA	NA	False	NA	NA	NA	175658058	175683103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_175658156_175660005_175660143_175660599_175660692_175682708
transcript_117854.known	chr5	+	2561	3	FSM	ENSG00000113749.8	ENST00000377291.2	2561	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	39	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTTGCCACTCTTGGGT	175657509	True	NA	5	True	TATAAA	-29	NA	175658029	175686242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_175658156_175682708_175684310_175685408
transcript_11786.known	chr1	+	2611	6	FSM	ENSG00000163382.13	ENST00000681922.1	2611	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	772.177596152595	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCAAGACAG	156575932	True	NA	NA	False	NA	NA	NA	156591765	156602460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156593556_156593881_156594091_156601498
transcript_117872.nic	chr5	-	1310	6	NIC	ENSG00000051596.10	novel	1796	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_1	431.863219086784	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATAATAAGTAAATGTTAT	NA	False	NA	NA	False	AAAACA	-26	NA	175968326	175917872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_175918173_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_117880.known	chr5	-	1601	6	FSM	ENSG00000051596.10	ENST00000265097.9	1601	6	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	73.8013550011109	4062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTAAGACTTTTAAAATT	-175944300	True	NA	-5	True	AATAAA	-22	NA	175968315	175959530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_175960133_175961050_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_117898.known	chr5	-	1796	5	FSM	ENSG00000051596.10	ENST00000513482.1	1796	5	0	0	0	0	multi-exon	FALSE	canonical	3	1080	junction_2	66.0776058888335	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCAGTTAATACTGGTA	-175944265	True	NA	NA	False	NA	NA	NA	175968280	175960218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_175961152_175961272_175961435_175964950_175965156_175967110_175967268_175967941
transcript_117911.known	chr5	-	2786	9	FSM	ENSG00000122203.15	ENST00000298569.9	2786	9	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_6	33.6839631724059	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355619	True	NA	-4	True	AATAAA	-22	NA	176361764	176346061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359480_176359568_176359810_176359919_176361601
transcript_117913.known	chr5	-	2700	8	FSM	ENSG00000122203.15	ENST00000393725.6	2700	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	197.364368307836	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355620	True	NA	-4	True	AATAAA	-22	NA	176361765	176346061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176355570_176355750_176359810_176359919_176361601
transcript_117917.known	chr5	-	2452	6	FSM	ENSG00000122203.15	ENST00000620366.4	2452	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	233.602226016791	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGGCTATTTTTTTGT	-176355662	True	NA	-7	True	AATAAA	-19	NA	176361807	176346064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176350612_176350738_176352621_176352749_176361601
transcript_117918.nic	chr5	-	2419	6	NIC	ENSG00000122203.15	novel	2786	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_3	221.324738788957	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355683	True	NA	-4	True	AATAAA	-22	NA	176361828	176346061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176347809_176347920_176348064_176348249_176348357_176359480_176359568_176359810_176359919_176361601
transcript_11792.known	chr1	+	2217	3	FSM	ENSG00000163382.13	ENST00000467374.2	2217	3	0	0	0	0	multi-exon	FALSE	canonical	3	1953	junction_2	21.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATTTGGAAACAATGAAAA	156575942	True	NA	-5	True	NA	NA	NA	156591775	156594261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364
transcript_117921.known	chr5	-	2243	5	FSM	ENSG00000122203.15	ENST00000393728.6	2243	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	254.568261965234	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTATTTTTTTGTCCT	-176355594	True	NA	-4	True	AATAAA	-22	NA	176361739	176346061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176347809_176347920_176348064_176348249_176348357_176359810_176359919_176361601
transcript_11793.known	chr1	-	2154	8	FSM	ENSG00000160818.17	ENST00000368232.9	2154	8	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	52.4423882144268	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGCATCTAACAGTCCAT	-156595732	True	NA	-10	True	AATGAA	-31	NA	156601479	156594300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156595850_156596080_156596132_156596386_156596479_156598034_156598122_156598226_156598320_156598420_156598495_156598967_156599105_156601408
transcript_117930.known	chr5	-	1085	5	FSM	ENSG00000175416.16	ENST00000345807.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	10.5445483544816	220	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTACACTTATTTAT	-176413732	True	NA	NA	False	NA	NA	NA	176416539	176392500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176392946_176397606_176397719_176397929_176398048_176410256_176410304_176416176
transcript_11794.known	chr1	+	2452	7	FSM	ENSG00000163382.13	ENST00000681734.1	2452	7	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	916.075688284907	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTCCTACCTGCCAGGGG	156575932	True	NA	NA	False	NA	NA	NA	156591765	156598309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156591987_156592100_156592210_156592364_156592476_156592556_156592671_156593407_156593556_156593944_156594091_156596706
transcript_117942.known	chr5	-	1087	5	FSM	ENSG00000048162.22	ENST00000618911.4	1087	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	476.938347692865	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGTGTGTACATAATAA	-176388914	False	NA	-46	True	NA	NA	NA	176388927	176383980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176384287_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_117943.known	chr5	-	881	5	FSM	ENSG00000048162.22	ENST00000614830.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_1	87.0875995765184	7983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTGATGATTTTGTAT	-176370375	True	NA	-11	True	AATAAA	-15	NA	176388598	176383945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176384375_176385220_176385328_176386839_176386910_176388234_176388344_176388432
transcript_117944.known	chr5	+	654	2	FSM	ENSG00000146066.3	ENST00000274787.3	654	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	13293	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTATCATCCCCATGGT	176376312	True	NA	21	True	AATAAA	-25	NA	176388750	176389761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176388974_176389330
transcript_117945.known	chr5	+	4485	11	FSM	ENSG00000113194.13	ENST00000261942.7	4485	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	110.700496837187	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACAGGCTGTGGATCTTTC	176440801	True	NA	26	True	ATTAAA	-22	NA	176448384	176510074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176448471_176479187_176479257_176486354_176486490_176488950_176489028_176492193_176492333_176493998_176494085_176494183_176494276_176496485_176496664_176498913_176499086_176500002_176500147_176506767
transcript_117955.known	chr5	+	337	3	FSM	ENSG00000113194.13	ENST00000506061.1	337	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGCTTTTTGTTCAT	176440845	False	NA	NA	False	NA	NA	NA	176448428	176453559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_176448471_176453175_176453229_176453317
transcript_117964.known	chr5	-	730	6	FSM	ENSG00000074317.11	ENST00000510387.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	35.319116636745	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGAGCCTGTGTTAGTGTCT	-176629282	False	NA	NA	False	NA	NA	NA	176629994	176620680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176620844_176621213_176621304_176626397_176626517_176626719_176626762_176629533_176629664_176629808
transcript_117979.known	chr5	-	2570	15	FSM	ENSG00000087206.17	ENST00000377227.8	2570	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	57.3142518871856	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTCCTTCATGTTGC	-177004382	False	NA	35	True	AATAGA	-14	NA	177006408	176905004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006283
transcript_11798.nic	chr1	+	1183	5	ISM	ENSG00000132692.19	ENST00000329117.10	3297	14	14718	0	106	0	3prime_fragment	TRUE	canonical	3	14	junction_1	6.06217782649107	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	156656736	True	NA	7	True	AATAAA	-22	NA	156656834	156659528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_156657097_156657674_156657758_156658126_156658272_156658542_156658734_156659026
transcript_117980.nic	chr5	-	2642	15	NIC	ENSG00000087206.17	novel	1945	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_10	50.9673765205524	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	NA	False	NA	-10	True	AATATA	-1	NA	177006780	176905049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_117981.known	chr5	-	2467	15	FSM	ENSG00000087206.17	ENST00000512031.5	2467	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	49.5072144814701	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTATGTTTGTACGAAA	-177004689	True	NA	-13	True	TTTAAA	-2	NA	177006715	176905052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176968554_176969292_176969596_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_117988.nic	chr5	-	1905	14	NIC	ENSG00000087206.17	novel	1945	15	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	52.2546110759445	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	NA	False	NA	-10	True	AATATA	-1	NA	177006780	176905049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006538
transcript_117989.nic	chr5	-	1828	14	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	50.6695992092267	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	NA	False	NA	-10	True	AATATA	-1	NA	177006814	176905049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176969600_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_11799.nnic	chr1	+	1038	4	NIC	ENSG00000132692.19	novel	3297	14	NA	NA	106	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	9.97775303139718	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGATGCTTCTGTGTGTA	156656736	True	NA	7	True	AATAAA	-22	NA	156656834	156659528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156657097_156657674_156657758_156658542_156658734_156659026
transcript_117993.nnic	chr5	-	1722	13	NIC	ENSG00000087206.17	novel	2574	15	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_9	50.4090903398275	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGTTTGTACGAAATCT	NA	False	NA	-10	True	AATATA	-1	NA	177006814	176905049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_176905493_176906010_176906048_176907113_176907178_176908522_176908695_176911310_176911390_176943334_176943489_176951473_176951578_176955958_176956036_176958092_176958155_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_117999.nic	chr5	-	918	5	ISM	ENSG00000087206.17	ENST00000511320.6	2574	15	-35	64313	-35	-36	5prime_fragment	FALSE	canonical	3	79	junction_4	28.8563251298567	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTACTTTTTCTCAAATA	NA	False	NA	NA	False	AATAAA	-15	NA	177006814	176969318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_176969707_176970741_176970867_176975395_176975481_176982468_176982624_177006649
transcript_118.known	SIRV1	-	670	5	FSM	SIRV1A	SIRV105	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_4	2566.82264677558	16324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCTGGAAGTCAAAAGACT	NA	False	NA	NA	False	NA	NA	NA	10640	6449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_6474_6560_6814_7552_7815_10282_10367_10593
transcript_118004.known	chr5	-	425	5	FSM	ENSG00000087206.17	ENST00000507513.1	425	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.8240036478057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAGTGAGCAGGAAGC	-177004688	True	NA	NA	False	NA	NA	NA	177006714	176970831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176970867_176975395_176975481_176982468_176982624_177001416_177001502_177006649
transcript_118005.known	chr5	-	1248	4	FSM	ENSG00000087206.17	ENST00000417486.6	1248	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	61.3206508626761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTTTATGCCATTTG	-177004339	False	NA	NA	False	TTTAAA	-34	NA	177006365	176969940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_176970867_176975395_176975481_176982468_176982624_177006283
transcript_118011.known	chr5	+	2306	7	FSM	ENSG00000113761.12	ENST00000511834.5	2306	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	44.9468822302751	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCCAGACTACAACTTAACA	177019555	True	NA	10	True	AATAAA	-15	NA	177022731	177065965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050702_177050937_177062057_177062152_177064511
transcript_118012.known	chr5	+	4314	7	FSM	ENSG00000113761.12	ENST00000358149.8	4314	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	19.9722029052603	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGCTGAAAAAGGTATCA	177019519	True	NA	NA	False	AATAAA	-35	NA	177022695	177067985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177044388_177044534_177050750_177050937_177062057_177062152_177064511
transcript_118018.known	chr5	+	1622	6	FSM	ENSG00000113761.12	ENST00000508155.5	1622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.8696510296786	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTGCTACCCTCGGCCCT	177019539	True	NA	NA	False	NA	NA	NA	177022715	177065458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177050750_177050937_177062057_177062152_177064511
transcript_118022.known	chr5	+	977	5	FSM	ENSG00000113761.12	ENST00000513587.5	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	53.5414559010119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCTGGGGCAGGGCAGGA	177019558	True	NA	NA	False	NA	NA	NA	177022734	177065018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177022914_177041125_177041230_177041777_177041871_177062057_177062152_177064511
transcript_118028.known	chr5	+	2733	18	FSM	ENSG00000160867.15	ENST00000393648.6	2733	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_10	139.446185872276	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGCGTCTTGACGGGAG	177079842	True	NA	-88	True	NA	NA	NA	177086904	177098022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093178_177093405_177093502_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_118029.known	chr5	+	2638	18	FSM	ENSG00000160867.15	ENST00000502906.5	2638	18	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	61.6054529559684	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACAGCCTGACACAGTGC	177079851	True	NA	NA	False	GGGGCT	-3	NA	177086913	177097732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177087034_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_118032.known	chr5	+	3093	18	FSM	ENSG00000160867.15	ENST00000292408.9	3093	18	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	97.4215326162601	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGAGCAACATGGAGT	177079852	True	NA	34	True	AATAAA	-19	NA	177086914	177098144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177087078_177089549_177089694_177090389_177090654_177090744_177090826_177090937_177091105_177091684_177091809_177092320_177092512_177092645_177092785_177093137_177093332_177093405_177093552_177093653_177093776_177095329_177095441_177095532_177095724_177096056_177096180_177096286_177096358_177096603_177096742_177097291_177097398_177097526
transcript_118055.known	chr5	+	533	5	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	0	95915	0	-5832	5prime_fragment	FALSE	canonical	2	8	junction_1	60.5366624451662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTACCTGTCCTTAGGAGA	177133068	False	NA	-10	True	NA	NA	NA	177133078	177204236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086_177135201_177135940_177136031_177191883_177192020_177204119
transcript_118070.known	chr5	+	809	4	FSM	ENSG00000165671.22	ENST00000511258.6	809	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	64.157791594024	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTGCTGTTCTTTAAA	177133929	True	NA	NA	False	ATTAAA	-17	NA	177134172	177137404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177134246_177135086_177135201_177135940_177136031_177136872
transcript_118073.nnic	chr5	+	858	3	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-239	74113	-239	-5	5prime_fragment	FALSE	canonical	3	58	junction_1	44	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177131577	False	NA	NA	False	ATTAAA	-9	NA	177131590	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177131935_177135086_177135201_177135940
transcript_118076.nic	chr5	+	874	3	ISM	ENSG00000165671.22	ENST00000354179.9	12136	24	-284	163811	-230	-5	5prime_fragment	FALSE	canonical	2	8	junction_1	69	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177131809	True	NA	NA	False	ATTAAA	-9	NA	177132794	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086_177135201_177135940
transcript_118079.nic	chr5	+	740	3	ISM	ENSG00000165671.22	ENST00000510954.6	1706	7	-127	102865	-41	-5	5prime_fragment	FALSE	canonical	3	96	junction_1	25	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177133690	False	NA	NA	False	ATTAAA	-9	NA	177133726	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133953_177135086_177135201_177135940
transcript_118081.nnic	chr5	+	649	3	NNC	ENSG00000165671.22	novel	1706	7	NA	NA	-4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	68.5	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177129022	True	NA	NA	False	ATTAAA	-9	NA	177133763	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_177133899_177135086_177135201_177135940
transcript_118082.nnic	chr5	+	586	3	NNC	ENSG00000165671.22	novel	1117	6	NA	NA	72	-5	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	70.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177133956	False	NA	NA	False	ATTAAA	-9	NA	177133971	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_177134044_177135086_177135201_177135940
transcript_118083.nic	chr5	+	646	3	ISM	ENSG00000165671.22	ENST00000511258.6	809	4	-59	1064	-59	-5	5prime_fragment	FALSE	canonical	3	13	junction_1	66.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177134077	False	NA	NA	False	ATTAAA	-9	NA	177134113	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177134246_177135086_177135201_177135940
transcript_118085.nnic	chr5	+	1415	2	ISM	ENSG00000165671.22	ENST00000508896.6	1436	6	-56	74113	-56	-5	intron_retention	FALSE	canonical	3	58	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGATGGGTTTTGGCCT	177131760	False	NA	NA	False	ATTAAA	-9	NA	177131773	177136340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177131935_177135086
transcript_118086.known	chr5	+	470	2	ISM	ENSG00000165671.22	ENST00000689549.1	7734	20	0	149938	0	-919	5prime_fragment	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGCCAATTGTTTGCACTT	177132997	False	NA	NA	False	AAAAAG	-16	NA	177133024	177135426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177133155_177135086
transcript_118088.known	chr5	+	1414	2	FSM	ENSG00000165671.22	ENST00000602285.1	1414	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTTTGGCCTGCCAG	177129056	True	NA	NA	False	ATTAAA	-14	NA	177133797	177136345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177133953_177135086
transcript_11809.known	chr1	+	956	2	FSM	ENSG00000285570.1	ENST00000650347.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGCTCGCTGTATGA	NA	False	NA	NA	False	AAGAAA	-32	NA	156689675	156704757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156689825_156703950
transcript_118091.known	chr5	-	1236	9	FSM	ENSG00000169228.14	ENST00000393611.6	1236	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_8	54.3179298206403	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301319	True	NA	-5	True	AATAAA	-22	NA	177303706	177301450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_118094.known	chr5	-	1588	8	FSM	ENSG00000169228.14	ENST00000303251.11	1588	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	24.5381834898102	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-177301332	True	NA	-28	True	AATAAA	-23	NA	177303719	177301197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_118096.nic	chr5	-	1492	8	NIC	ENSG00000169228.14	novel	1236	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	50	junction_7	57.4889519110997	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCCCTTTCCCTGCTG	-177301357	True	NA	-5	True	AATAAA	-22	NA	177303744	177301450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171_177303321_177303406
transcript_118099.known	chr5	-	1820	7	FSM	ENSG00000169228.14	ENST00000478234.5	1820	7	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	20.2210011841375	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGGTTGGTCTGACTAGC	-177301346	True	NA	-28	True	AATAAA	-23	NA	177303733	177301197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008_177303078_177303171
transcript_11810.known	chr1	-	974	4	FSM	ENSG00000143320.9	ENST00000368222.8	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	899	junction_3	69.1712849863776	9393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTGGCTCATTGGG	-156689177	True	NA	-34	True	AATAAA	-2	NA	156705583	156699605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376
transcript_11811.known	chr1	-	1033	5	FSM	ENSG00000143320.9	ENST00000621784.4	1033	5	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_4	417.843496419413	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATAAAACCTGTCTC	-156705665	False	145	29	True	ATTAAA	-8	NA	156705816	156699617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156700077_156700541_156700659_156700873_156701053_156705376_156705547_156705708
transcript_118116.known	chr5	+	1226	5	FSM	ENSG00000169230.10	ENST00000303204.9	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	5318	junction_1	188.750496688088	341	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGCCCCAGCTCTGGAGT	177254492	True	NA	16	True	AATAAA	-16	NA	177303798	177306949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177304078_177304624_177304851_177305870_177305985_177306097_177306177_177306421
transcript_11812.known	chr1	-	456	3	FSM	ENSG00000143320.9	ENST00000368220.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	433.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGCCAGAAGGGGCT	-156705665	False	145	NA	False	NA	NA	NA	156705816	156700874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156701053_156705376_156705547_156705708
transcript_118122.known	chr5	-	1608	6	FSM	ENSG00000169228.14	ENST00000495458.5	1608	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_5	19.2603219080056	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGCCCCTTTCCCTGCT	-177301294	True	NA	-6	True	AATAAA	-21	NA	177303681	177301451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302497_177302576_177302645_177302751_177302831_177303008
transcript_118123.known	chr5	-	1385	7	FSM	ENSG00000169228.14	ENST00000303270.6	1385	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	25.5652759291452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTGTAAATAAAATCAGT	-177301323	True	NA	-40	True	NA	NA	NA	177303710	177301485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177301808_177301924_177301988_177302127_177302179_177302396_177302497_177302576_177302645_177302751_177302831_177303008
transcript_118133.known	chr5	-	1611	8	FSM	ENSG00000169223.15	ENST00000303127.12	1611	8	0	0	0	0	multi-exon	FALSE	canonical	3	2417	junction_4	143.625931374753	3869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGCCGTGTGACTGTCC	-177325663	True	NA	-34	True	AATAAA	-14	NA	177351668	177331566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177332247_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_118134.known	chr5	-	1149	8	FSM	ENSG00000169223.15	ENST00000515209.5	1149	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	926.98849694556	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACCGGGATTATAAAAG	-177325642	True	NA	-86	True	NA	NA	NA	177351647	177332030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177332270_177334283_177334404_177337135_177337251_177337362_177337525_177337705_177337786_177338487_177338606_177351172_177351292_177351451
transcript_118136.known	chr5	+	1536	11	FSM	ENSG00000169220.18	ENST00000511890.1	1536	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	70.6484960915659	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGCCACAATGGGGGAG	177366901	False	NA	NA	False	NA	NA	NA	177366942	177372298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177367035_177367413_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_118138.nic	chr5	+	1857	10	ISM	ENSG00000169220.18	ENST00000511890.1	1536	11	356	-298	-3	0	3prime_fragment	FALSE	canonical	3	136	junction_2	44.801895903446	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366001	True	NA	18	True	NA	NA	NA	177367298	177372596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_118141.nnic	chr5	+	1730	9	NIC	ENSG00000169220.18	novel	2329	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	72.1750259785197	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366016	True	NA	18	True	NA	NA	NA	177367313	177372596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_177367558_177368156_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_118148.known	chr5	+	590	4	FSM	ENSG00000169220.18	ENST00000506944.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	20.7257220756131	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGGCCCCTTCCTGCC	177370394	True	NA	NA	False	NA	NA	NA	177371112	177372166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177371247_177371349_177371397_177371474_177371590_177371872
transcript_118150.known	chr5	+	458	3	FSM	ENSG00000169220.18	ENST00000503044.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	128	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCCTGTCTGTGCCATG	177370388	True	NA	NA	False	NA	NA	NA	177371106	177372143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177371247_177371349_177371397_177371872
transcript_118151.nic	chr5	+	1152	3	NIC	ENSG00000169220.18	novel	2329	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	247	junction_2	18	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177370340	True	NA	18	True	NA	NA	NA	177371058	177372596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_177371247_177371349_177371590_177371872
transcript_118152.known	chr5	+	559	2	FSM	ENSG00000169220.18	ENST00000512000.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGTGGTGTCGCTCCCAGG	177366004	True	NA	NA	False	NA	NA	NA	177367301	177368016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177367558_177367713
transcript_118153.known	chr5	+	414	2	FSM	ENSG00000169220.18	ENST00000509289.1	414	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGAAGGTACATGGTGGAT	177370347	True	NA	NA	False	NA	NA	NA	177371065	177371582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177371247_177371349
transcript_118154.known	chr5	+	2329	8	FSM	ENSG00000169220.18	ENST00000425155.6	2329	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	39.2698669335611	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGTTGTCTTCCTTGTG	177366016	True	NA	18	True	NA	NA	NA	177367313	177372596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177368267_177368716_177368921_177370587_177370665_177370904_177371032_177371164_177371247_177371349_177371397_177371474_177371590_177371872
transcript_118155.known	chr5	+	565	4	FSM	ENSG00000169220.18	ENST00000512490.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	12.4988888395018	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTTGGCCCTGGCCAGA	177366005	True	NA	NA	False	NA	NA	NA	177367302	177368804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177367558_177367713_177367826_177368156_177368267_177368716
transcript_118156.known	chr5	+	1660	13	FSM	ENSG00000198055.11	ENST00000507633.5	1660	13	0	0	0	0	multi-exon	TRUE	canonical	3	448	junction_2	24.3441756666536	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGATGGGTCTGGCT	177419900	True	NA	19	True	AATAAA	-22	NA	177426744	177436685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177426898_177430871_177430968_177431994_177432108_177432232_177432311_177432705_177432807_177433146_177433240_177433346_177433411_177433535_177433677_177433913_177434105_177434901_177434940_177435031_177435122_177436072_177436282_177436392
transcript_118165.known	chr5	-	1573	4	FSM	ENSG00000131187.10	ENST00000510358.5	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	12.2836838484589	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAACTCAATAAAGTGCTTT	-177404407	False	NA	-36	True	NA	NA	NA	177404472	177402171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177402460_177402549_177402699_177403253_177403398_177403480
transcript_118169.known	chr5	-	421	2	FSM	ENSG00000246334.3	ENST00000506465.2	1190	2	284	485	1	-485	multi-exon	FALSE	canonical	2	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACGCCTGTGGAGAAT	-177447687	False	NA	NA	False	NA	NA	NA	177447698	177445978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177446345_177447643
transcript_118171.known	chr5	-	943	3	FSM	ENSG00000131187.10	ENST00000504406.5	943	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_2	15	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGCTTTGAAAATGCT	-177403685	False	NA	-27	True	NA	NA	NA	177403750	177402162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177402460_177402549_177402699_177403253
transcript_118176.known	chr5	-	2995	14	FSM	ENSG00000113758.14	ENST00000309007.9	2995	14	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	93.625655210575	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCCGCCTGCCCTGACC	-177473601	False	NA	-39	True	AATAAA	-19	NA	177473741	177456607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467628_177467742_177467818_177468107_177468221_177468843_177468900_177473435
transcript_11818.known	chr1	+	2271	8	FSM	ENSG00000143303.12	ENST00000368216.9	2271	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	16.3482508581942	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTAGGTAGATAAAAG	156727253	True	NA	36	True	ATTAAA	-25	NA	156728468	156736960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156734008_156734494_156735724_156735910_156736631
transcript_118199.known	chr5	-	2667	13	FSM	ENSG00000113758.14	ENST00000472831.5	2667	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_6	97.4016241593993	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGACCCCCTCCCCG	-177447954	True	NA	-31	True	AATAAA	-19	NA	177473624	177456933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177457504_177457654_177457758_177458057_177458708_177459097_177459269_177460431_177460556_177460643_177460704_177466771_177466836_177466910_177467063_177467254_177467333_177467480_177467818_177468107_177468221_177468843_177468900_177473435
transcript_118209.known	chr5	-	1686	14	FSM	ENSG00000196923.14	ENST00000493815.5	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_8	115.940864338975	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488849	True	NA	-6	True	AATAAA	-17	NA	177497561	177483393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_118210.known	chr5	-	1712	13	FSM	ENSG00000196923.14	ENST00000355841.7	1712	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_6	94.4952600222184	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488892	True	NA	-6	True	AATAAA	-17	NA	177497604	177483393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_118211.known	chr5	-	1567	13	FSM	ENSG00000196923.14	ENST00000359895.6	1567	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	146.883646317606	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGCCCTTCCCCTG	-177488849	True	NA	-6	True	AATAAA	-17	NA	177497561	177483393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177483731_177483866_177483983_177484069_177484191_177488067_177488249_177489392_177489628_177489770_177489833_177490869_177490907_177491009_177491147_177491403_177491421_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_118212.known	chr5	-	977	8	FSM	ENSG00000196923.14	ENST00000355572.6	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	108.375951847149	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTGCCTGTCTTCTA	-177488861	True	NA	-19	True	AATAAA	-15	NA	177497573	177490245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177490594_177490869_177490907_177491009_177491147_177491806_177491926_177492404_177492436_177492525_177492678_177496416_177496524_177497527
transcript_118215.known	chr5	-	2099	17	FSM	ENSG00000183258.12	ENST00000330503.12	2099	17	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_16	47.6339804525089	482	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGCCTCTGTG	-177508085	True	NA	-12	True	ATTAAA	-19	NA	177516961	177511576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_177511928_177512095_177512207_177512321_177512394_177512495_177512646_177512779_177512877_177513010_177513083_177513352_177513485_177513684_177513848_177514700_177514838_177514915_177515070_177515185_177515259_177515684_177515822_177515928_177515990_177516118_177516194_177516287_177516448_177516724_177516836_177516918
transcript_11823.known	chr1	+	1802	7	FSM	ENSG00000143303.12	ENST00000368218.8	1802	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	19.310331143947	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCATTTCTGTAG	NA	False	NA	25	True	ATTAAA	-14	NA	156728441	156736949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156729216_156731990_156732116_156732280_156732474_156732984_156733048_156733376_156733521_156735724_156735910_156736631
transcript_118231.known	chr5	+	1064	6	FSM	ENSG00000027847.14	ENST00000505433.5	1064	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	70.6671069168676	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAAGCCTGTACCTAC	177598176	True	NA	NA	False	NA	NA	NA	177600161	177609707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177600261_177604178_177604542_177607282_177607528_177608538_177608623_177608909_177609015_177609539
transcript_118233.nic	chr5	+	663	3	NIC	ENSG00000027847.14	novel	552	4	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	87.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAAGCCTCTGGTCCCTTG	177598155	True	NA	8	True	ATTAAA	-20	NA	177600140	177605224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_177600261_177604178_177604542_177605044
transcript_118244.known	chr5	+	1570	6	FSM	ENSG00000170089.16	ENST00000506672.5	1570	6	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_5	176.620044162603	1496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTTTTAAAATTATTA	NA	False	NA	33	True	AATAAA	-26	NA	177875521	177884272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_118251.known	chr5	+	1056	6	FSM	ENSG00000170089.16	ENST00000512851.5	1056	6	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_5	176.620044162603	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGTTGTAGGGAGAGGA	NA	False	NA	NA	False	NA	NA	NA	177875594	177883831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_177875861_177876531_177876689_177878643_177878849_177882368_177882531_177882651_177882753_177883666
transcript_118262.nnic	chr5	-	699	4	Antisense	novelGene_ENSG00000145911.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	2	3	junction_3	1.24721912892465	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGCATTAAAGTAAATTAA	NA	False	NA	NA	False	AATAAA	-16	NA	178115291	178088501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_178088705_178091088_178091189_178093224_178093390_178115060
transcript_118267.known	chr5	+	3911	11	FSM	ENSG00000145916.19	ENST00000313386.9	3911	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	99.4024647581739	503	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCACTTTGTTG	178126298	True	NA	7	True	ATTAAA	-18	NA	178131013	178150568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178131055_178131236_178131377_178138107_178138259_178142582_178142729_178142851_178142993_178143626_178143728_178143941_178144109_178146113_178146280_178147532_178147636_178147728_178147884_178147968
transcript_118288.known	chr5	-	780	4	FSM	ENSG00000145912.9	ENST00000274606.8	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	5726	junction_2	248.741275670569	25451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGAGTCTGTGGGTGT	-178117989	True	NA	NA	False	AGTAAA	-15	NA	178153885	178149462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178149839_178150887_178150994_178153490_178153561_178153657
transcript_118289.known	chr5	-	599	3	FSM	ENSG00000145912.9	ENST00000314397.8	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	2741	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATGCTAAGACTAAAAT	-178117933	True	NA	NA	False	ACTAAA	-30	NA	178153829	178149481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178149839_178153490_178153561_178153657
transcript_118290.known	chr5	-	475	3	FSM	ENSG00000145912.9	ENST00000511078.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	5726	junction_1	42.5	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGAGAGTGTGGGAAAGA	-178117998	True	NA	NA	False	NA	NA	NA	178153894	178150825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178150994_178153490_178153561_178153657
transcript_118292.known	chr5	-	2081	13	FSM	ENSG00000175309.15	ENST00000308158.10	2081	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_9	18.1588285843431	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAGTAGTTTCACTTAA	-178230757	True	NA	NA	False	ATTAAA	-45	NA	178232802	178208470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178208916_178211889_178211971_178212972_178213104_178214795_178214886_178215275_178215431_178222354_178222581_178222851_178222935_178224447_178224565_178224641_178224730_178225354_178225430_178229939_178230100_178231404_178231524_178232491
transcript_118306.known	chr5	-	562	4	FSM	ENSG00000175309.15	ENST00000511716.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.2858495669176	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCCCTTAGTTTTGTGAG	-178230496	False	NA	-10	True	AATAAA	-12	NA	178232541	178226465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178226699_178229939_178230100_178231404_178231524_178232491
transcript_118318.known	chr5	-	1955	13	FSM	ENSG00000113240.14	ENST00000522136.5	1955	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	35.9755897179679	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCAGGTACTAGAAACCAA	-178625307	True	NA	-79	True	NA	NA	NA	178627055	178603167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178605824_178605866_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_118320.known	chr5	-	2504	13	FSM	ENSG00000113240.14	ENST00000316308.9	2504	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_9	24.4237759843423	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625302	True	NA	-5	True	CATAAA	-14	NA	178627050	178602663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178617343_178617435_178618555_178618779_178623255_178623417_178626945
transcript_118332.nic	chr5	-	2491	12	NIC	ENSG00000113240.14	novel	2504	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTTTGTTGTTGTTGTTCT	-178625380	True	NA	-5	True	CATAAA	-14	NA	178627128	178602663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_118335.nic	chr5	-	1885	12	NIC	ENSG00000113240.14	novel	2780	15	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTTAAAGGAATATTCT	-178625380	True	NA	-7	True	AGTAAA	-21	NA	178627128	178603269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_118337.nic	chr5	-	1652	12	NIC	ENSG00000113240.14	novel	1955	13	NA	NA	-16	-231	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	17.3538763621673	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTAAATATTGTATGTTTT	-178625380	True	NA	-4	True	ATTAAA	-18	NA	178627128	178603502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_178603758_178603843_178603935_178605302_178605383_178608375_178608459_178612415_178612546_178612795_178612891_178613472_178613640_178613726_178613844_178616881_178616949_178618555_178618779_178623255_178623417_178626945
transcript_118342.known	chr5	-	1316	3	FSM	ENSG00000113240.14	ENST00000520126.1	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTTCAATTAAATCAGTA	-178625304	True	NA	NA	False	AGTAAA	-27	NA	178627052	178617730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178618779_178623255_178623417_178626945
transcript_118344.known	chr5	-	1690	2	FSM	ENSG00000113240.14	ENST00000520957.1	1690	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCCACTGATTAT	-178625282	True	NA	NA	False	ATTAAA	-19	NA	178627030	178621811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178623417_178626945
transcript_118345.known	chr5	-	2521	5	FSM	ENSG00000169131.13	ENST00000335815.7	2521	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	23.5902522241709	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTCTTTTGTTCTAGTA	-178728098	True	NA	80	True	ATTAAA	-16	NA	178730659	178711511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_178713622_178725375_178725472_178726998_178727126_178728989_178729074_178730555
transcript_118352.known	chr5	+	2794	5	FSM	ENSG00000178338.11	ENST00000322434.8	2794	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	11.4537111889553	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTCTCTTCTTTGTTGT	178858548	True	NA	-1	True	ATTAAA	-11	NA	178859952	178885020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178860128_178860996_178861081_178866243_178866371_178866975_178867072_178882708
transcript_118360.known	chr5	+	532	5	FSM	ENSG00000198939.8	ENST00000520805.5	532	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	4.58257569495584	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTCTAGGGGAAACCTGGG	178895672	True	NA	NA	False	NA	NA	NA	178895914	178931339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178895975_178912589_178912720_178912978_178913072_178916564_178916711_178931236
transcript_118365.known	chr5	+	2332	5	FSM	ENSG00000178187.8	ENST00000320129.7	2332	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.75925291729789	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178940221	True	NA	NA	False	NA	NA	NA	178941190	178966433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178941387_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_118367.known	chr5	+	2383	5	FSM	ENSG00000178187.8	ENST00000519564.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	7.49583217528247	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	178940228	True	NA	NA	False	NA	NA	NA	178941197	178966433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_178941445_178942684_178942825_178946358_178946486_178946896_178946987_178964654
transcript_118369.nnic	chr5	+	593	5	NNC	ENSG00000234284.7	novel	3252	5	NA	NA	-11	-1143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	15.8015030930605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCAGAGTGATCCTTTT	179023059	True	NA	NA	False	NA	NA	NA	179023792	179031178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179023905_179024969_179025038_179027472_179027600_179028031_179028128_179030988
transcript_118370.known	chr5	+	553	5	FSM	ENSG00000234284.7	ENST00000522442.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	14.6180539060437	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTTTTCAGTAAAGTGT	179023070	True	NA	NA	False	CATAAA	-37	NA	179023803	179032352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179023918_179024969_179025038_179027472_179027600_179028031_179028128_179032204
transcript_118373.known	chr5	+	5893	5	FSM	ENSG00000177932.7	ENST00000315475.7	5893	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	5.1234753829798	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTATCCATGAGGTGTG	179058679	True	NA	NA	False	NA	NA	NA	179060372	179083977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179060667_179062014_179062096_179076444_179076572_179077070_179077167_179078682
transcript_118378.known	chr5	+	2636	18	FSM	ENSG00000176783.15	ENST00000319449.9	2636	18	0	0	0	0	multi-exon	TRUE	canonical	3	144	junction_1	31.8263019342444	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179549921	True	NA	4	True	AATAAA	-16	NA	179550553	179610012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179550880_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_118379.known	chr5	+	2454	18	FSM	ENSG00000176783.15	ENST00000393438.6	2454	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	49.4023800611807	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTGCGTGCAGAAGCT	179559347	False	NA	4	True	AATAAA	-16	NA	179559691	179610012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179559836_179560024_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_118383.known	chr5	+	2642	17	FSM	ENSG00000176783.15	ENST00000437570.6	2642	17	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_7	26.6398872698441	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTGCGTGCAGAAGC	179559347	False	NA	3	True	AATAAA	-15	NA	179559691	179610011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179560199_179562546_179562665_179567460_179567563_179569301_179569426_179577074_179577137_179580946_179581013_179585795_179585866_179589545_179589648_179591624_179591742_179593477_179593646_179594865_179594964_179596561_179596682_179598691_179598822_179601891_179601987_179605875_179605925_179607581_179607660_179609375
transcript_118386.known	chr5	+	658	6	FSM	ENSG00000176783.15	ENST00000502984.5	658	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	94.7514643686313	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGCCAATCTCTGCTTGA	179550493	True	NA	NA	False	NA	NA	NA	179550837	179569382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179550880_179555649_179555791_179560024_179560199_179562546_179562665_179567460_179567563_179569301
transcript_11839.known	chr1	-	2985	4	FSM	ENSG00000143319.17	ENST00000368219.2	2985	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	97.4896005849969	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	NA	False	NA	-5	True	GATAAA	-17	NA	156728766	156721894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156723463_156724147_156724349_156726905_156727770_156728414
transcript_118402.known	chr5	-	2279	14	FSM	ENSG00000169045.17	ENST00000393432.8	2279	14	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_13	77.8238034196365	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTTGTCTGTGCTTC	-179605489	True	NA	-1	True	AATAAA	-21	NA	179623710	179614177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623594
transcript_118403.known	chr5	-	2248	14	FSM	ENSG00000169045.17	ENST00000442819.6	2248	14	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_13	79.9897922481696	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTCTTGTCTGTGCTT	-179623710	False	NA	-2	True	AATAAA	-20	NA	179623721	179614178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_11841.nic	chr1	-	3004	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_3	110.200826776491	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTATGTACAGTTTCTT	-156728631	False	115	-5	True	GATAAA	-17	NA	156728746	156721894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727809_156728414
transcript_118437.nic	chr5	-	2236	13	NIC	ENSG00000169045.17	novel	2248	14	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	102.138352520273	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623750	False	NA	-4	True	AATAAA	-18	NA	179623761	179614180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036_179623165_179623635
transcript_118464.known	chr5	-	592	3	FSM	ENSG00000169045.17	ENST00000505087.1	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	61	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTGGGTGTTGAAGCATA	-179605491	True	NA	NA	False	NA	NA	NA	179623712	179621010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179621398_179623036_179623165_179623635
transcript_118465.known	chr5	-	1996	12	FSM	ENSG00000169045.17	ENST00000510678.5	1996	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	125.487676784589	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623158	False	NA	-4	True	AATAAA	-18	NA	179623169	179614180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616898_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179620891_179621036_179621241_179621398_179623036
transcript_118466.known	chr5	-	2114	12	FSM	ENSG00000169045.17	ENST00000329433.10	2114	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	92.8009511208028	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623157	False	NA	-4	True	AATAAA	-18	NA	179623168	179614180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_118467.known	chr5	-	2105	12	FSM	ENSG00000169045.17	ENST00000510411.5	2105	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	99.9356817951815	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTCTGTCTTGTCTGTGC	-179623158	False	NA	-4	True	AATAAA	-18	NA	179623169	179614180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179617020_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621036_179621241_179621398_179623036
transcript_118468.known	chr5	-	2444	13	FSM	ENSG00000169045.17	ENST00000514332.5	2444	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	80.4066055882365	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTTGTCTGTGCT	-179605450	True	NA	-3	True	AATAAA	-19	NA	179623671	179614179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179614960_179615545_179615596_179616125_179616219_179616868_179616959_179617050_179617111_179617513_179617650_179617798_179617933_179617988_179618061_179618144_179618324_179619268_179619408_179620891_179621398_179623036_179623165_179623594
transcript_118469.known	chr5	-	594	5	FSM	ENSG00000169045.17	ENST00000504348.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	104.92229267415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTAAAGAAACACAAGGAAAG	-179605450	True	NA	NA	False	NA	NA	NA	179623671	179619300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179619408_179620891_179621036_179621241_179621398_179623036_179623188_179623635
transcript_118471.nnic	chr5	+	534	5	NNC	ENSG00000250999.2	novel	666	4	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.59807621135332	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTGTTAGGTTTTTAT	NA	False	NA	NA	False	AATAGA	-18	NA	179658011	179664430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179658098_179658388_179658482_179662660_179662779_179662974_179663104_179664322
transcript_118473.known	chr5	+	666	4	FSM	ENSG00000250999.2	ENST00000508188.2	666	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTATTGTTAGGTTTTTAT	NA	False	NA	NA	False	AATAGA	-18	NA	179657761	179664430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179658098_179658388_179658482_179662974_179663104_179664322
transcript_118477.known	chr5	+	485	3	FSM	ENSG00000250999.2	ENST00000514793.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGTTAGGTTTTTATAT	179658166	False	NA	NA	False	AATAGA	-20	NA	179658235	179664432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179658482_179662974_179663104_179664322
transcript_118479.known	chr5	+	5103	16	FSM	ENSG00000127022.16	ENST00000681072.1	5103	16	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	1115.65559002568	1136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614286	True	NA	-8	True	AATAAA	-4	NA	179698955	179731622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699103_179699574_179699771_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_11848.nic	chr1	-	2010	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	1	-710	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	104.080097360959	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTATTAACCTGGTTGGT	-156723527	True	NA	NA	False	AAAAAG	-1	NA	156728440	156722604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_118484.known	chr5	+	4207	15	FSM	ENSG00000127022.16	ENST00000452673.6	4207	15	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	787.52160968083	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGACTGAATTTCTT	179614236	True	NA	33	True	ATTAAA	-18	NA	179698905	179730925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699050_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_118491.known	chr5	+	4868	15	FSM	ENSG00000127022.16	ENST00000680618.1	4868	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	883.491106754497	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATGAGCCCTAGTAAAAAG	179614307	True	NA	-8	True	AATAAA	-4	NA	179698976	179731622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699085_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679_179726760_179728590
transcript_118517.known	chr5	+	855	5	FSM	ENSG00000127022.16	ENST00000502498.6	855	5	0	0	0	0	multi-exon	FALSE	canonical	3	3099	junction_1	219.273231380394	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTGCATTAATAGTTTT	179614269	True	NA	NA	False	NA	NA	NA	179698938	179708622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238
transcript_11852.nic	chr1	-	1428	4	NIC	ENSG00000143319.17	novel	2985	4	NA	NA	1	771	combination_of_known_junctions	FALSE	canonical	3	33	junction_3	104.080097360959	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTTGTGTCCTGTGTCTG	-156723527	True	NA	-2	True	NA	NA	NA	156728440	156723186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156723463_156724147_156724349_156726905_156727770_156728353
transcript_118523.known	chr5	+	597	2	FSM	ENSG00000225051.5	ENST00000442010.2	597	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTGATTCTAAGTCGAA	179678863	False	NA	NA	False	NA	NA	NA	179679031	179694649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179679285_179694305
transcript_118524.known	chr5	+	5103	14	FSM	ENSG00000127022.16	ENST00000680614.1	5103	14	0	0	0	0	multi-exon	FALSE	canonical	3	2917	junction_10	221.775861049797	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGTCCTGTTCAAATT	179614253	True	NA	-4	True	CATAAA	-10	NA	179698922	179729954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179699103_179705678_179705853_179706257_179706332_179707131_179707191_179708238_179708381_179708977_179709060_179709872_179710066_179716104_179716295_179719667_179719782_179720403_179720561_179722803_179723020_179723659_179723780_179724656_179724784_179726679
transcript_118529.nnic	chr5	+	1981	9	NNC	ENSG00000161011.20	novel	2253	7	NA	NA	-292	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_7	131.646069063987	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	179806598	True	NA	33	True	ATTAAA	-23	NA	179807031	179837255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179807124_179811573_179811683_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_11853.known	chr1	-	3303	3	FSM	ENSG00000143319.17	ENST00000313146.10	3303	3	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_2	6.5	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTACAGTTTCTTCTTT	-156723522	True	NA	-1	True	GATAAA	-21	NA	156728435	156721890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156723463_156724147_156724349_156726905
transcript_118531.nic	chr5	-	1522	9	NIC	ENSG00000161010.16	novel	2879	9	NA	NA	-49	0	combination_of_known_junctions	FALSE	canonical	2	16	junction_6	65.764257009412	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856725	True	NA	-16	True	AATAAA	-15	NA	179858909	179837275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179851242_179851425_179853196_179853277_179853377_179853438_179858730
transcript_118534.nic	chr5	+	2013	8	NIC	ENSG00000161011.20	novel	2253	7	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	158.251027658913	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACGTTTGCATAGAGAGAAA	NA	False	NA	33	True	ATTAAA	-23	NA	179818804	179837255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_+_179819038_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_118535.known	chr5	+	2840	8	FSM	ENSG00000161011.20	ENST00000389805.9	2840	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.287587540972	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTGCTAAATTGCATGA	179818823	True	NA	12	True	AATAAA	-22	NA	179820904	179838078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179821142_179822957_179823054_179823857_179824088_179824181_179824324_179825145_179825227_179833031_179833247_179833586_179833783_179836435
transcript_118540.nic	chr5	-	1340	8	ISM	ENSG00000161010.16	ENST00000522663.5	2879	9	-49	2143	-49	0	5prime_fragment	FALSE	canonical	3	27	junction_6	56.9729617217408	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856725	True	NA	-16	True	AATAAA	-15	NA	179858909	179837275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853196_179853277_179853377_179853438_179858730
transcript_118543.known	chr5	-	1168	7	FSM	ENSG00000161010.16	ENST00000292586.11	1168	7	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	20.9980157792746	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856633	True	NA	-16	True	AATAAA	-15	NA	179858817	179837275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179847977_179848067_179853377_179853438_179858730
transcript_118550.known	chr5	-	1096	6	FSM	ENSG00000161010.16	ENST00000523084.5	1096	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	57.6298533747918	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCTCTATGCAAACGTC	-179856650	True	NA	-16	True	AATAAA	-15	NA	179858834	179837275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179844151_179844228_179853377_179853438_179858730
transcript_118551.known	chr5	-	868	6	FSM	ENSG00000161010.16	ENST00000521299.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	56.3254826876788	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGGGAAGACCTCATGGG	-179856660	True	NA	NA	False	NA	NA	NA	179858844	179837526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179847977_179848067_179853377_179853438_179858730
transcript_118552.known	chr5	-	1004	5	FSM	ENSG00000161010.16	ENST00000376931.6	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	65.3466716826496	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAACGTCATTGGTTAAA	-179856624	True	NA	-6	True	AATAAA	-25	NA	179858808	179837265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179837886_179840871_179840960_179841906_179842065_179853377_179853438_179858730
transcript_118557.nnic	chr5	-	680	4	NNC	ENSG00000197226.13	novel	5173	22	NA	NA	-19	-4286	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	134.665841581631	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCCTTTACCCAAAAAT	-179901247	True	NA	1	True	AATAAA	-23	NA	179907878	179898826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_179899102_179899188_179899308_179904701_179904813_179907703
transcript_118561.known	chr5	+	921	3	FSM	ENSG00000161011.20	ENST00000506042.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	17.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCTAACCAGGGG	179805916	True	NA	110	True	AAAAAG	-17	NA	179806397	179813024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179806592_179811573_179811683_179812406
transcript_118566.nnic	chr5	+	819	3	NNC	ENSG00000161011.20	novel	1722	2	NA	NA	-292	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	57.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATGTTTCTAACCAGGGG	179806598	True	NA	110	True	AAAAAG	-17	NA	179807031	179813024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179807124_179811573_179811683_179812406
transcript_118567.nnic	chr5	+	541	3	NNC	ENSG00000161011.20	novel	1722	2	NA	NA	-292	894	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	63.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTCCCCTGGGGTCTCTGC	179806598	True	NA	20	True	AATAAA	-29	NA	179807031	179814535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_179807124_179811573_179811683_179814195
transcript_118568.known	chr5	+	1454	2	FSM	ENSG00000245317.2	ENST00000499601.2	1454	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTATTCAAATCTA	179858943	True	NA	NA	False	AATAAA	-17	NA	179859012	179861283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179859213_179860029
transcript_118569.known	chr5	+	1722	2	FSM	ENSG00000161011.20	ENST00000512234.1	1722	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCTAGCTGCTCAGG	179811181	False	NA	27	True	AATAAA	-24	NA	179811614	179813641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_179811683_179811987
transcript_118570.known	chr5	-	579	6	FSM	ENSG00000161010.16	ENST00000519213.1	579	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	72.7554808931946	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGGGAATGTGAAGCAGC	-179856660	True	NA	NA	False	AAGAAA	-41	NA	179858844	179844173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179844228_179847977_179848067_179851242_179851425_179853196_179853277_179853377_179853438_179858730
transcript_118572.known	chr5	-	697	2	FSM	ENSG00000113269.14	ENST00000523487.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGGCTACTGGTCTTAT	NA	False	NA	-4	True	AATAAA	-22	NA	179978287	179976773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_179977386_179978202
transcript_118573.known	chr5	-	4326	12	FSM	ENSG00000050748.18	ENST00000393360.7	4326	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	83.740745140548	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGCATGTCCAATTTT	-180289507	True	NA	-14	True	GATAAA	-1	NA	180292056	180233593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180236532_180238331_180238404_180239923_180239988_180241030_180241156_180242572_180242756_180247438_180247511_180248972_180249139_180261683_180261823_180264780_180264840_180269279_180269410_180280439_180280609_180291847
transcript_118579.nnic	chr5	+	337	2	FSM	ENSG00000248367.2	ENST00000691211.1	342	2	5	0	-2	0	multi-exon	FALSE	canonical	3	11	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	180291624	True	NA	NA	False	AATAAA	-18	NA	180292182	180295253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180292301_180295034
transcript_118580.known	chr5	+	393	2	FSM	ENSG00000248367.2	ENST00000504573.2	465	2	69	3	69	0	multi-exon	FALSE	canonical	3	14	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTATTC	180293183	False	NA	NA	False	AATAAA	-18	NA	180293244	180295253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180293419_180295034
transcript_118583.known	chr5	-	3034	19	FSM	ENSG00000131459.13	ENST00000253778.13	3034	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	182.90738397099	637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTGTGTTTGCATTTT	-180337947	True	NA	-29	True	AATAAA	-15	NA	180353336	180300697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180301609_180302422_180302585_180304771_180304940_180307175_180307304_180312429_180312545_180313806_180313965_180316340_180316462_180316763_180316862_180316962_180317059_180318792_180318957_180324187_180324306_180324815_180324896_180328276_180328339_180330699_180330835_180331494_180331554_180335827_180335954_180336478_180336578_180338492_180338601_180353210
transcript_118594.known	chr5	-	8445	2	FSM	ENSG00000131446.17	ENST00000307826.5	8445	2	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGCCCAGATTAACTAT	-180799458	True	NA	NA	False	AATAAA	-26	NA	180802806	180784779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180793098_180802679
transcript_118595.known	chr5	-	534	2	FSM	ENSG00000131446.17	ENST00000505682.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCCAATAACGTCTTTT	-180802572	False	NA	NA	False	NA	NA	NA	180802767	180795429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180795876_180802679
transcript_118600.known	chr5	+	1708	2	FSM	ENSG00000245060.8	ENST00000653411.1	1708	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	NA	False	NA	28	True	AATAAA	-38	NA	180830936	180835726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831230_180834311
transcript_118601.known	chr5	+	1817	2	FSM	ENSG00000245060.8	ENST00000659553.1	1817	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCCGATCATTTATGTG	180831255	False	NA	39	True	AATAAA	-33	NA	180831415	180835737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831807_180834311
transcript_118602.known	chr5	-	1652	1	FSM	ENSG00000278970.3	ENST00000623091.1	1652	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTTATTTTCTTTGGTA	-180831157	True	NA	0	True	AGTAAA	-21	NA	180831605	180829953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180830000_180831600
transcript_118603.known	chr5	+	1321	4	FSM	ENSG00000245060.8	ENST00000667360.1	1321	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTGCAGTTTTCCTC	180831519	True	NA	7	True	AATAAA	-17	NA	180831648	180835705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831807_180832672_180832861_180834311_180835003_180835421
transcript_118604.known	chr5	+	1231	3	FSM	ENSG00000245060.8	ENST00000508309.2	1231	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGTCAACTGAGCCGA	180830834	True	NA	28	True	AATAAA	-38	NA	180830994	180835726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_180831230_180834311_180835003_180835421
transcript_118622.known	chr5	-	725	4	FSM	ENSG00000196670.14	ENST00000506377.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.3275853524323	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858640	True	NA	-36	True	AATAAA	-20	NA	180861285	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180848083_180851380_180851494_180851987_180852061_180861218
transcript_118624.nnic	chr5	-	890	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	33.436506994601	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858606	True	NA	-36	True	AATAAA	-20	NA	180861251	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860655_180861073
transcript_118625.nnic	chr5	-	995	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-216	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	33.0689515339624	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861490	False	NA	-36	True	AATAAA	-20	NA	180861501	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860655_180861218
transcript_118628.nnic	chr5	-	1008	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-204	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	38.0263066836631	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861478	False	NA	-36	True	AATAAA	-20	NA	180861489	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860680_180861218
transcript_118629.nnic	chr5	-	904	4	NNC	ENSG00000196670.14	novel	725	4	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	38.4216374224502	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861365	False	66	-36	True	AATAAA	-20	NA	180861376	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_-_180848083_180851380_180851494_180860527_180860689_180861218
transcript_118632.nic	chr5	-	819	3	NIC	ENSG00000196670.14	novel	725	4	NA	NA	-167	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_2	4.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180861441	False	NA	-36	True	AATAAA	-20	NA	180861452	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr5_-_180848083_180851380_180851494_180861218
transcript_118635.known	chr5	-	3941	2	FSM	ENSG00000196670.14	ENST00000502412.2	3941	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGCTGTGAGTTTAGATGG	-180858631	True	NA	-36	True	AATAAA	-20	NA	180861276	180847610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_180851494_180861218
transcript_118636.nnic	chr5	+	1254	8	NNC	ENSG00000113303.12	novel	700	5	NA	NA	-1496	-464	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	1.66598625567009	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGAGTACGTGACTTTG	180908040	True	NA	NA	False	AATAAA	-41	NA	180908067	180950134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_180908278_180908585_180908934_180911338_180911615_180947511_180947626_180948354_180948376_180948919_180948947_180949238_180949266_180949903
transcript_118644.nnic	chr5	+	465	3	FSM	ENSG00000250222.3	ENST00000688148.1	445	3	-21	1	3	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGCAGCGTTTGTACT	181191683	True	NA	27	True	AATAAA	-24	NA	181191872	181194428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181192017_181193341_181193468_181194233
transcript_118646.known	chr5	+	392	3	FSM	ENSG00000250222.3	ENST00000508877.1	392	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAAGCAGCGTTTGTACT	181191880	False	NA	27	True	AATAAA	-24	NA	181192069	181194428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181192141_181193341_181193468_181194233
transcript_118647.known	chr5	+	289	2	FSM	ENSG00000250222.3	ENST00000514487.1	289	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAGCGTTTGTACTT	181191734	True	NA	28	True	AATAAA	-25	NA	181191923	181194429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181192017_181194233
transcript_118648.nnic	chr5	+	403	2	NNC	ENSG00000250222.3	novel	289	2	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAGCGTTTGTACTT	181191796	False	NA	28	True	AATAAA	-25	NA	181191985	181194429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr5_+_181192193_181194233
transcript_11865.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000361531.6	883	6	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	104.296883941947	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTGTACAGCTGCTGT	-156736869	True	NA	-11	True	AATAAA	-17	NA	156741088	156737302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741011
transcript_118650.known	chr5	+	2696	8	FSM	ENSG00000146063.20	ENST00000351937.9	2696	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	6.80036013452109	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	181220856	True	NA	9	True	AATAAA	-19	NA	181223289	181235808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173_181234350_181234931_181234996_181235353
transcript_118652.known	chr5	+	3645	6	FSM	ENSG00000146063.20	ENST00000315073.10	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	5.67802782663136	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTGTTCCTTCAG	181220847	True	NA	9	True	AATAAA	-19	NA	181223280	181235808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181224813_181230743_181230840_181232658_181232890_181233412_181233436_181233635_181233764_181234173
transcript_118654.nnic	chr5	-	545	2	Antisense	novelGene_ENSG00000146063.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGGGGCCATGATTTATG	-181223595	True	NA	-17	True	AATAAA	-26	NA	181223656	181222863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr5_-_181223233_181223480
transcript_11866.known	chr1	-	883	6	FSM	ENSG00000143314.12	ENST00000368211.8	883	6	0	0	0	0	multi-exon	FALSE	canonical	1	148	junction_2	111.433208694715	1640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGTGTACAGCTGCT	-156736912	True	NA	-13	True	AATAAA	-15	NA	156741131	156737304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741052
transcript_118661.known	chr5	-	1140	8	FSM	ENSG00000204628.12	ENST00000512805.6	1140	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3741.96475184917	6092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTCTATCTACATTG	-181103479	True	NA	24	True	NA	NA	NA	181243906	181236896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_11867.known	chr1	-	990	6	FSM	ENSG00000143314.12	ENST00000434558.5	990	6	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_5	154.026750923338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAAGACACATCAGTGGA	-156741435	False	NA	NA	False	NA	NA	NA	156741590	156737529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156737535_156737645_156737777_156738030_156738135_156738342_156738439_156738521_156738765_156741179
transcript_118682.known	chr5	-	965	8	FSM	ENSG00000204628.12	ENST00000376817.8	965	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4760.04238962432	3890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103476	True	NA	-16	True	AATAAA	-13	NA	181243903	181236936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242214_181243691
transcript_118726.known	chr5	+	672	3	FSM	ENSG00000248275.3	ENST00000507434.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTCTGTCAGTAAATGT	181260401	True	NA	NA	False	AATAAA	-19	NA	181261221	181272307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181261385_181271572_181271690_181271915
transcript_118730.known	chr5	+	529	3	FSM	ENSG00000248275.3	ENST00000509252.2	864	3	11	324	2	-4	multi-exon	FALSE	canonical	2	13	junction_2	59	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAAATTGGCTGGGTGCGG	181260403	True	NA	NA	False	NA	NA	NA	181261223	181264257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181261385_181263627_181263790_181264051
transcript_118732.known	chr5	+	886	2	FSM	ENSG00000233937.8	ENST00000505151.6	1280	2	394	0	378	0	multi-exon	FALSE	canonical	3	53	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCTTGTACTGTTAACTA	181246886	False	NA	8	True	AATAAA	-17	NA	181246900	181257586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181247387_181257186
transcript_118734.known	chr5	+	807	2	FSM	ENSG00000248275.3	ENST00000514146.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGGCTGGGTGCGGTGGC	181260391	True	NA	NA	False	AAAAAG	-3	NA	181261211	181264261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181261385_181263627
transcript_118737.known	chr5	-	581	2	FSM	ENSG00000204628.12	ENST00000514318.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATTCATTACTACATTT	-181103481	True	NA	NA	False	AGTAAA	-36	NA	181243908	181243041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181243406_181243691
transcript_118739.known	chr5	-	633	2	FSM	ENSG00000183718.6	ENST00000688015.1	2856	2	886	1337	-63	-97	multi-exon	FALSE	canonical	3	10	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAGGAGAATGACATGAAC	-181260209	False	NA	NA	False	AAAACA	-20	NA	181260257	181256483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181256860_181260000
transcript_118742.known	chr5	-	1098	8	FSM	ENSG00000204628.12	ENST00000504325.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	3733.40043064097	37223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTTTTTTTTTCTTATA	-181103462	True	NA	-5	True	AATAAA	-24	NA	181243889	181236925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242169_181242346_181243691
transcript_118743.known	chr5	-	1208	9	FSM	ENSG00000204628.12	ENST00000508682.5	1208	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5023.37299530903	3907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181103475	True	NA	-16	True	AATAAA	-13	NA	181243902	181236936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240328_181241491_181241640_181242173_181242346_181243691
transcript_118744.known	chr5	-	1651	7	FSM	ENSG00000204628.12	ENST00000513060.5	1651	7	0	0	0	0	multi-exon	FALSE	canonical	3	8776	junction_1	823.336234812701	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTTACAAATAAAAAAAAAAC	-181103520	True	NA	-1	True	NA	NA	NA	181243947	181236960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181242346_181243691
transcript_118745.known	chr5	-	643	6	FSM	ENSG00000204628.12	ENST00000502905.5	643	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4984.51981237912	6117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	-181242164	False	140427	-8	True	AATAAA	-21	NA	181242206	181236928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239486_181239583_181241491_181241640_181242173
transcript_118746.known	chr5	-	825	6	FSM	ENSG00000204628.12	ENST00000511566.5	825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5168.4446170971	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGACTTTTAGGTTTTTTT	-181103453	True	NA	-13	True	AATAAA	-16	NA	181243880	181236933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181239066_181239178_181239486_181239583_181241491_181241640_181242173_181242346_181243691
transcript_118747.known	chr5	-	922	7	FSM	ENSG00000204628.12	ENST00000511900.5	922	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3981.10541600362	1715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGGCTTTTCTGACTTT	-181103453	True	NA	15	True	AATAAA	-5	NA	181243880	181236944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181242169_181242346_181243691
transcript_118748.known	chr5	-	889	8	FSM	ENSG00000204628.12	ENST00000507756.5	889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5341.76498004553	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	-181242204	False	140427	-8	True	AATAAA	-21	NA	181242246	181236928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237224_181237320_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181241491_181241640_181242173
transcript_118749.known	chr5	-	888	2	FSM	ENSG00000204628.12	ENST00000509148.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	11382	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTAGGTTTTTTTTTCTT	-181238153	False	364	-8	True	AATAAA	-21	NA	181238195	181236928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237720_181238098
transcript_118750.known	chr5	-	1058	9	FSM	ENSG00000204628.12	ENST00000512968.5	1058	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5025.99485176816	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACCTGGTGCGAGTGTGGC	-181103466	True	NA	-60	True	NA	NA	NA	181243893	181237019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181237608_181237720_181238098_181238240_181239066_181239178_181239486_181239583_181240215_181240346_181241491_181241564_181242173_181242346_181243691
transcript_118751.known	chr5	-	456	4	FSM	ENSG00000204628.12	ENST00000509535.5	456	4	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	5018.88241211793	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGACTTTTAGGTTTT	-181239542	False	NA	-16	True	AATAAA	-13	NA	181239584	181236936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181237043_181238098_181238240_181239066_181239178_181239486
transcript_118752.known	chr5	+	1046	3	FSM	ENSG00000233937.8	ENST00000506340.3	1061	3	14	1	0	-1	multi-exon	FALSE	canonical	3	29	junction_1	12	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCCTTGTACTGTTAACT	181245404	True	NA	7	True	AATAAA	-16	NA	181246506	181257585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_+_181246883_181247115_181247387_181257186
transcript_118753.known	chr5	+	311	2	ISM	ENSG00000248275.3	ENST00000433265.4	849	3	2429	352	2412	-32	3prime_fragment	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCATCTCCACAAAAAA	181263623	False	NA	NA	False	NA	NA	NA	181263633	181264229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr5_+_181263767_181264051
transcript_118754.known	chr5	-	587	5	FSM	ENSG00000204628.12	ENST00000503081.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	4574.26564461444	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACCAACCACATTGGCCAC	-181103479	True	NA	NA	False	NA	NA	NA	181243906	181239149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr5_-_181239178_181239486_181239583_181241491_181241564_181242169_181242346_181243691
transcript_118756.known	chr6	+	1485	8	FSM	ENSG00000112679.15	ENST00000344450.9	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	49.5745161656796	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	290630	True	NA	16	True	AATAAA	-22	NA	292096	351355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768_348842_350821
transcript_118758.known	chr6	+	3075	7	FSM	ENSG00000112679.15	ENST00000419235.7	3075	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	40.557572248184	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCGTGCGATGCATTCT	292464	False	NA	16	True	AATAAA	-22	NA	292486	351355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_292561_304627_304662_311879_311963_335113_335164_345853_345929_348102_348275_348768
transcript_118760.known	chr6	+	587	7	FSM	ENSG00000112679.15	ENST00000603726.5	587	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_6	50.0288805480283	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCAGTAGTGATTTGTAA	292414	False	NA	NA	False	AAAAAG	-22	NA	292539	350950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768_348842_350821
transcript_118762.known	chr6	+	1166	6	FSM	ENSG00000112679.15	ENST00000603795.5	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	35.2442903177238	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAAAGAGCAGTCTGTGCC	292376	False	NA	NA	False	NA	NA	NA	292461	349471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_292561_304627_304662_311879_311963_345853_345929_348102_348275_348768
transcript_118765.known	chr6	-	3484	3	FSM	ENSG00000287265.1	ENST00000665870.1	3484	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATGTACAATTTAAAAT	-291979	False	NA	NA	False	NA	NA	NA	292013	285442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_287824_288400_288658_291167
transcript_118771.known	chr6	-	4456	28	FSM	ENSG00000112685.14	ENST00000230449.9	4456	28	0	0	0	0	multi-exon	TRUE	canonical	2	320	junction_17	61.0457113577315	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTTGTAATTTACTTG	-686615	True	NA	-20	True	AATAAA	-15	NA	693139	485153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_486765_488978_489039_491124_491187_497366_497490_499644_499701_532468_532611_549174_549292_553853_553921_555226_555289_555953_556014_556483_556565_562783_562846_564032_564155_564544_564703_564863_564930_572519_572645_576756_576883_592468_592588_598020_598124_598859_598942_599079_599226_610097_610179_617710_617836_619429_619544_629834_629962_632940_633118_637700_637862_693018
transcript_118778.known	chr6	-	536	3	FSM	ENSG00000112685.14	ENST00000475028.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	26.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTATATTTCTTTATGGCT	-686584	True	NA	NA	False	NA	NA	NA	693108	679142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_679515_689138_689213_693018
transcript_118779.nnic	chr6	-	450	2	NIC	ENSG00000112685.14	novel	536	3	NA	NA	-30	-73	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGAATATATTTGCAG	-686645	True	NA	NA	False	AATAAA	-17	NA	693169	679215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_679515_693018
transcript_118780.known	chr6	-	1025	1	FSM	ENSG00000188996.5	ENST00000380907.3	1162	1	137	0	137	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGTAGTTCATGTTTTG	NA	False	NA	-1	True	ATTAAA	-15	NA	656963	655938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_655900_657000
transcript_118781.known	chr6	-	1665	11	FSM	ENSG00000112699.11	ENST00000380815.5	1665	11	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_5	24.0518190580255	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGTCAGTGTGGAT	-2240745	True	NA	-17	True	ATTAAA	-24	NA	2245605	1623805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_1624232_1624471_1624541_1726415_1726513_1742467_1742587_1930102_1930231_1959866_1959972_1960773_1960967_2115770_2115881_2117468_2117557_2124686_2124732_2245320
transcript_118785.known	chr6	+	3612	6	FSM	ENSG00000250903.10	ENST00000660533.1	3612	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.44580418759451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTGACTGTCTCAAAAGG	2245392	True	NA	NA	False	NA	NA	NA	2245761	2362108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697_2269800_2271815_2273418_2360543
transcript_118786.nnic	chr6	+	718	5	NIC	ENSG00000250903.10	novel	2308	6	NA	NA	-1	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	7.29725975966321	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCACAGGTTTTGGTAATC	2245391	True	NA	NA	False	AATAAA	-16	NA	2245760	2283770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697_2269800_2283498
transcript_118789.known	chr6	+	568	4	FSM	ENSG00000250903.10	ENST00000533653.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	7.58653778449403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTATCTGTTTCTTTTT	2245483	True	NA	NA	False	ATTAAA	-14	NA	2245852	2270013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2269697
transcript_118790.known	chr6	+	539	4	FSM	ENSG00000250903.10	ENST00000525811.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.80656320908194	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTTTTGGTAATCACT	2245471	True	NA	NA	False	AATAAA	-19	NA	2245840	2283773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2245931_2248836_2248927_2263600_2263685_2283498
transcript_118801.known	chr6	-	2476	7	FSM	ENSG00000021355.13	ENST00000380739.6	2476	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_6	9.15453742990631	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGTCTCAGGCCTCTTC	-2840417	True	NA	-1	True	AATAAA	-24	NA	2841863	2832331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2834013_2835855_2836024_2836107_2836251_2837881_2838000_2838548_2838687_2840418_2840595_2841811
transcript_118813.known	chr6	-	4143	7	FSM	ENSG00000170542.6	ENST00000380698.5	4143	7	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_3	36.2950869035099	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATCTAGATTTTCCCTT	-2890317	True	NA	-2	True	AATAAA	-24	NA	2903309	2887269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2890571_2891832_2891989_2893410_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_118819.nic	chr6	-	1051	5	ISM	ENSG00000170542.6	ENST00000380698.5	4143	7	-14	5790	-14	-5790	5prime_fragment	FALSE	canonical	3	370	junction_1	42.4286165223426	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTGTTAAGGTAGTG	-2903307	False	NA	NA	False	NA	NA	NA	2903323	2893059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_2893554_2895390_2895509_2896052_2896191_2900443_2900622_2903200
transcript_118820.nic	chr6	-	2885	4	NIC	ENSG00000170542.6	novel	4143	7	NA	NA	-14	-5793	intron_retention	FALSE	canonical	3	400	junction_3	39.3643945152921	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGTGTTAAGGTA	-2903307	False	NA	NA	False	NA	NA	NA	2903323	2893062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_2895509_2896052_2896191_2900443_2900622_2903200
transcript_118824.known	chr6	-	2036	8	FSM	ENSG00000124570.21	ENST00000616722.4	2036	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	114.90581768899	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCATTCACTCCGTGT	NA	False	NA	-13	True	AATAAA	-16	NA	2972165	2948170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2968778_2968914_2971532
transcript_118828.known	chr6	-	1495	7	FSM	ENSG00000124570.21	ENST00000380524.5	1495	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	92.3176882052164	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2962077	False	947	-1	True	AATAAA	-28	NA	2962108	2948158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2961893
transcript_118829.known	chr6	-	1638	7	FSM	ENSG00000124570.21	ENST00000643098.1	1638	7	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	73.5151156036786	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971574	False	NA	-1	True	AATAAA	-28	NA	2971605	2948158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971247
transcript_118830.known	chr6	-	1375	7	FSM	ENSG00000124570.21	ENST00000380546.7	1375	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971098	True	NA	-1	True	AATAAA	-28	NA	2971585	2948158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971490
transcript_118831.known	chr6	-	1315	7	FSM	ENSG00000124570.21	ENST00000380539.7	1315	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	79.4035053802203	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCGTGTGTTTGTGTGTCT	-2971080	True	NA	-1	True	AATAAA	-28	NA	2971567	2948158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971532
transcript_118832.known	chr6	-	1313	7	FSM	ENSG00000124570.21	ENST00000380520.6	1313	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	94.9047768379794	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAAATAAAGGGCCCATTT	-2971630	False	31	-38	True	NA	NA	NA	2971661	2948195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_2948700_2948913_2949070_2953043_2953187_2954591_2954710_2955523_2955671_2959167_2959343_2971591
transcript_118872.known	chr6	+	1021	7	FSM	ENSG00000124588.22	ENST00000380441.5	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	591.131589035433	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999955	False	NA	16	True	AATAAA	-16	NA	2999988	3019755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000086_3004494_3004652_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_118873.known	chr6	+	1091	7	FSM	ENSG00000124588.22	ENST00000380430.6	1091	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	463.699255983876	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	3000146	False	NA	16	True	AATAAA	-16	NA	3000157	3019755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000368_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_118883.known	chr6	+	1573	3	FSM	ENSG00000244041.7	ENST00000605901.1	1573	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	2	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTCTCTGTAAC	2988229	True	NA	9	True	AATAAA	-23	NA	2988647	2991173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_2988710_2989527_2989734_2989868
transcript_118888.known	chr6	+	1073	7	FSM	ENSG00000124588.22	ENST00000380455.11	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	1034	junction_4	105.311310989002	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2987243	True	NA	16	True	AATAAA	-16	NA	2999893	3019755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3015529_3015644_3016883_3016986_3019478
transcript_118889.known	chr6	+	851	6	FSM	ENSG00000124588.22	ENST00000380454.8	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_4	367.097044390172	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGGGATACTTTTTTCTT	2999968	False	NA	16	True	AATAAA	-16	NA	3000001	3019755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3000086_3006467_3006560_3010024_3010190_3012543_3012675_3016883_3016986_3019478
transcript_118891.known	chr6	+	1481	8	FSM	ENSG00000137275.16	ENST00000479389.1	1481	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	30.607455407639	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGGGTCTTCGATAGT	3062701	False	NA	NA	False	AATACA	-35	NA	3063990	3106051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3064060_3077778_3077936_3080978_3081117_3083084_3083314_3085258_3085409_3089580_3089658_3104224_3104316_3105481
transcript_118896.known	chr6	+	1063	8	FSM	ENSG00000137274.13	ENST00000433912.5	1063	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	121.164250132636	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAAACTCTCCGCCTT	3116636	True	NA	-8	True	GGGGCT	-30	NA	3118691	3152645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137423_3138040_3138180_3140385_3140510_3152487
transcript_118904.known	chr6	+	1563	8	FSM	ENSG00000137274.13	ENST00000424847.6	1563	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	114.415283694344	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTACCCCTCCCTTCA	3118315	True	NA	16	True	NA	NA	NA	3118375	3152669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118848_3119284_3119513_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_118912.known	chr6	+	1909	7	FSM	ENSG00000137274.13	ENST00000380379.10	1909	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	22.1409625405542	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGCAAGTTAAACCTTG	3116655	True	NA	-11	True	AATAAA	-3	NA	3118710	3153578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3118848_3123656_3123761_3127241_3127409_3129044_3129199_3137361_3137494_3140385_3140510_3152487
transcript_118921.known	chr6	-	1616	4	FSM	ENSG00000137267.7	ENST00000333628.4	1616	4	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_2	37.1423687391576	1935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGGTCTGTGTTCTCA	-3136531	True	NA	-11	True	AATAAA	-18	NA	3157544	3153665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3154924_3155624_3155736_3156043_3156153_3157406
transcript_118922.known	chr6	-	817	4	FSM	ENSG00000137267.7	ENST00000489942.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	699.632919624443	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACATCTGCTTCCGCACC	-3136513	True	NA	NA	False	AAAACA	-37	NA	3157526	3154578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3155056_3155624_3155736_3156043_3156153_3157406
transcript_118924.known	chr6	+	691	2	FSM	ENSG00000137274.13	ENST00000464040.1	691	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATAAAAAAGGAA	NA	False	NA	-15	True	AATAAA	-6	NA	3150013	3153046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3150146_3152487
transcript_118925.known	chr6	-	1620	3	FSM	ENSG00000230269.7	ENST00000425384.7	1620	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGCTGTCCTTTTTTTTT	NA	False	NA	NA	False	ATTAAA	-13	NA	3195784	3182629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3183727_3190826_3191231_3195665
transcript_118926.known	chr6	-	1651	3	FSM	ENSG00000230269.7	ENST00000435043.3	1651	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTTTTTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	3195784	3182625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3183727_3190826_3191258_3195665
transcript_118927.known	chr6	-	1220	2	FSM	ENSG00000230269.7	ENST00000656983.1	1220	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCCTTTTTTTTTTCTA	NA	False	NA	NA	False	ATTAAA	-17	NA	3195784	3182625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3183727_3195665
transcript_118932.nnic	chr6	+	911	2	Antisense	novelGene_ENSG00000137266.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTGGACTCTCT	NA	False	NA	8	True	AATAAA	-22	NA	3455809	3469354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_3456252_3468885
transcript_118938.known	chr6	+	778	4	FSM	ENSG00000180822.12	ENST00000324987.4	778	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	309.134634459198	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGGCTGTGAGTGATAGA	3250159	True	NA	NA	False	NA	NA	NA	3258976	3267920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3263683_3263760_3264173_3264326_3267590
transcript_118940.known	chr6	+	629	4	FSM	ENSG00000180822.12	ENST00000419065.6	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	299.031027747215	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	3250134	True	NA	15	True	AATAAA	-15	NA	3258951	3267781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3263683_3263760_3264208_3264326_3267590
transcript_118947.known	chr6	+	726	3	FSM	ENSG00000180822.12	ENST00000380306.8	726	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTCATCAGGCCGCGCT	3231514	True	NA	15	True	AATAAA	-15	NA	3231806	3267781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3232163_3255050_3255230_3267590
transcript_118950.known	chr6	+	785	3	FSM	ENSG00000180822.12	ENST00000438998.7	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_2	50	2842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGATTTGTGTGTGCAT	3250129	True	NA	8	True	ATTAAA	-17	NA	3258946	3268049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3263683_3263760_3267590
transcript_118953.known	chr6	+	4603	2	FSM	ENSG00000180822.12	ENST00000473000.2	4603	2	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGATTTGTGTGTGCATT	3250143	True	NA	9	True	ATTAAA	-18	NA	3258960	3268050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3263683
transcript_118955.known	chr6	+	489	2	FSM	ENSG00000180822.12	ENST00000380305.4	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGTCATCAGGCCGCG	3250079	True	NA	13	True	AATAAA	-13	NA	3258896	3267779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3259197_3267590
transcript_118956.known	chr6	-	1922	4	FSM	ENSG00000137285.11	ENST00000259818.8	1922	4	0	0	0	0	multi-exon	FALSE	canonical	3	2737	junction_3	60.4207469886517	5477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTACTTGAAAGCACAGT	-3171414	True	NA	-17	True	AATAAA	-16	NA	3227653	3224276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3225812_3226158_3226270_3226560_3226670_3227486
transcript_118957.known	chr6	-	1765	2	FSM	ENSG00000228793.3	ENST00000666680.2	1766	2	0	1	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTGCCTTGTGTTAT	NA	False	NA	NA	False	ATTAAA	-35	NA	3720081	3593489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3594536_3719362
transcript_118958.known	chr6	-	1833	3	FSM	ENSG00000228793.3	ENST00000655328.1	1833	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATTAAATGGCATTAAAA	-3720040	True	NA	NA	False	AATAAA	-30	NA	3720077	3593512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_3594536_3595566_3595662_3719362
transcript_118960.known	chr6	+	1643	2	FSM	ENSG00000145945.7	ENST00000648326.1	1643	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGTTTTGGTTAATTTA	3849129	True	NA	8	True	AATAAA	-18	NA	3849372	3851317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3849487_3849788
transcript_118962.known	chr6	+	1935	1	FSM	ENSG00000145945.7	ENST00000380274.2	1935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTTGGTTAATTTATTT	3849142	True	NA	11	True	AATAAA	-21	NA	3849385	3851320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_3849400_3851300
transcript_118966.known	chr6	+	7517	15	FSM	ENSG00000112739.17	ENST00000337659.11	7517	15	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_4	31.5681963439181	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4010677	True	NA	6	True	AATAAA	-19	NA	4021299	4064983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_4021467_4031558_4032756_4037396_4037571_4040771_4040928_4042486_4042569_4043812_4044024_4047174_4047249_4049015_4049107_4049731_4049880_4051956_4052095_4052719_4052874_4056320_4056436_4057035_4057188_4058727_4058815_4060412
transcript_118983.known	chr6	-	1405	10	FSM	ENSG00000198721.13	ENST00000380125.6	1405	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	213.088980428944	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTTTGGTAGTAGA	-4135457	False	NA	-7	True	AATAAA	-30	NA	4135468	4115692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135369
transcript_118987.known	chr6	-	1368	10	FSM	ENSG00000198721.13	ENST00000380118.8	1368	10	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_9	111.588529876507	2312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125419	True	NA	-20	True	AATAAA	-17	NA	4135575	4115705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_119001.nnic	chr6	-	1365	9	NIC	ENSG00000198721.13	novel	1368	10	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_2	218.759249804437	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4135651	False	NA	-20	True	AATAAA	-17	NA	4135662	4115705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_4116030_4117307_4117452_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_119003.known	chr6	-	1133	8	FSM	ENSG00000198721.13	ENST00000478266.6	1133	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	246.796867641287	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125408	True	NA	-20	True	AATAAA	-17	NA	4135564	4115705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133712_4135510
transcript_119018.known	chr6	+	629	4	FSM	ENSG00000112739.17	ENST00000461612.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	54.4120084785212	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTCCTGGTTTTTTT	4062088	False	NA	6	True	AATAAA	-19	NA	4062103	4064983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_4062300_4062556_4062761_4063073_4063120_4064800
transcript_11902.nic	chr1	+	2170	8	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_4	497.450561588275	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757659	True	NA	18	True	AATAAA	-18	NA	156767528	156800815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156791066_156791163_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_119023.known	chr6	-	1380	10	FSM	ENSG00000198721.13	ENST00000361538.6	1380	10	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_9	122.710137224998	2362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTAAGAATTCACACAGGT	-4125441	True	NA	-20	True	AATAAA	-17	NA	4135597	4115705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_119024.known	chr6	-	1451	11	FSM	ENSG00000198721.13	ENST00000496241.6	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	257.847706989998	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCACACAGGTGTTTGG	-4125435	True	NA	-14	True	AATAAA	-23	NA	4135591	4115699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4116030_4117307_4117452_4119185_4119276_4125249_4125371_4126134_4126238_4127761_4127832_4130178_4130250_4130371_4130561_4130766_4130866_4133548_4133702_4135510
transcript_119027.nic	chr6	+	2031	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-11	-116	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTCCAAACGTCATTAT	4764998	True	NA	12	True	AATAAA	-15	NA	4772959	4954257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_119028.nic	chr6	+	3318	7	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	24.1919408068059	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAATGTTTCTCTGATT	4764998	True	NA	38	True	AATAAA	-20	NA	4772959	4955544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545_4943757_4952265_4952410_4953897
transcript_119033.nic	chr6	+	1584	5	NIC	ENSG00000153046.18	novel	690	4	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	219	junction_1	21.6953335996476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTAGTTTGGTTATTGTTT	4764998	True	NA	NA	False	AAAAAG	-26	NA	4772959	4943813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_4773179_4891712_4892380_4935514_4935772_4937564_4937738_4943545
transcript_119039.known	chr6	+	690	4	FSM	ENSG00000153046.18	ENST00000440139.5	690	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	117.7351075744	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCCAGCCATTGGTCT	4765009	True	NA	NA	False	NA	NA	NA	4772970	4943597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_4773179_4935514_4935772_4937564_4937738_4943545
transcript_119043.known	chr6	+	773	2	FSM	ENSG00000153046.18	ENST00000483019.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCACAGGCTTAGCTG	4765079	True	NA	-32	True	NA	NA	NA	4773040	4892347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_4773179_4891712
transcript_119046.known	chr6	-	1042	8	FSM	ENSG00000124787.14	ENST00000464646.1	1042	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	83.5615378762556	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAAATTAAAAATCG	-5002797	False	861	-36	True	NA	NA	NA	5003658	4995077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003585
transcript_119054.known	chr6	+	1732	3	FSM	ENSG00000272142.4	ENST00000671039.1	1732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCCTCTCGCTCTGCCT	5003549	True	NA	NA	False	AAAAAG	-14	NA	5003777	5043962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5003960_5021380_5021474_5042505
transcript_119057.known	chr6	+	1278	3	FSM	ENSG00000272142.4	ENST00000663198.1	1278	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATGCATACACCAAACAT	5003549	True	NA	NA	False	TATAAA	-23	NA	5003777	5043590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5003960_5021380_5021474_5042587
transcript_119060.known	chr6	-	1488	8	FSM	ENSG00000124787.14	ENST00000380051.7	1488	8	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	44.3395985547907	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGCCAGTCCCTGTTGT	-5003176	True	NA	NA	False	AATAAA	-18	NA	5004037	4994716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_119061.known	chr6	-	1056	7	FSM	ENSG00000124787.14	ENST00000618533.4	1056	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	73.1110266801269	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTACGCTTGCTTTCAG	-5003202	True	NA	-7	True	AATAAA	-22	NA	5004063	4995048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_119062.known	chr6	-	1088	7	FSM	ENSG00000124787.14	ENST00000319533.9	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	81.1521205309305	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTACGCTTGCTTTCAGAT	-5003175	True	NA	-5	True	AATAAA	-24	NA	5004036	4995046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4995277_4995950_4996086_4996221_4996421_4998715_4998842_4999808_4999905_5002100_5002246_5003879
transcript_119063.known	chr6	-	632	5	FSM	ENSG00000124787.14	ENST00000468105.5	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	39.4810080924994	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATTTTGAAAGTAATTG	-5003186	True	NA	NA	False	AATAAA	-15	NA	5004047	4998687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_4998842_4999808_4999905_5000562_5000632_5002100_5002246_5003879
transcript_119067.known	chr6	-	941	2	FSM	ENSG00000214113.11	ENST00000458438.2	941	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGAGAGCCCCAGCCT	NA	False	NA	NA	False	NA	NA	NA	5132894	5108727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5109492_5132717
transcript_119068.known	chr6	-	1497	3	FSM	ENSG00000214113.11	ENST00000330636.9	1497	3	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_1	47	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTGGAAACAGATTCATT	-5256420	True	NA	-7	True	AATAAA	-22	NA	5260950	5108418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5109492_5216617_5216739_5260647
transcript_119069.known	chr6	-	592	3	FSM	ENSG00000214113.11	ENST00000500576.4	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	315.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGTGCTTTTGTAGAT	-5260632	False	NA	-3	True	AATAAA	-17	NA	5260737	5186599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5186981_5216617_5216739_5260647
transcript_11907.known	chr1	+	2068	7	FSM	ENSG00000143294.15	ENST00000271526.9	2068	7	0	0	0	0	multi-exon	FALSE	canonical	3	972	junction_3	113.643692692947	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757665	True	NA	18	True	AATAAA	-18	NA	156767534	156800815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_156768240_156782281_156782330_156786607_156787175_156791696_156791793_156794664_156794809_156797275_156797342_156800373
transcript_119072.known	chr6	+	1692	7	FSM	ENSG00000145982.13	ENST00000324331.10	1692	7	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	39.279624347604	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACCACTTCACTCAGGC	5260953	False	NA	NA	False	NA	NA	NA	5261043	5771429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5261359_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_119075.known	chr6	+	1679	7	FSM	ENSG00000145982.13	ENST00000274680.9	1679	7	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	13.3218700722617	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260093	True	NA	9	True	AATAAA	-20	NA	5261512	5771583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5261661_5368549_5369183_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_119081.nnic	chr6	+	1045	6	NIC	ENSG00000145982.13	novel	1679	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.9321238350678	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGACATAGCATTTGTCTT	5260094	True	NA	9	True	AATAAA	-20	NA	5261513	5771583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_5261661_5404541_5404702_5431040_5431173_5545179_5545341_5613168_5613321_5771290
transcript_119087.known	chr6	-	354	1	FSM	ENSG00000217239.3	ENST00000407959.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAAACTTTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	5788699	5788345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5788300_5788700
transcript_119088.nnic	chr6	+	615	4	NNC	ENSG00000233064.2	novel	411	3	NA	NA	-32	42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.82842712474619	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCAAACCACTTTATTGA	5851424	True	NA	NA	False	AATAAA	-16	NA	5851473	5870262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_5851663_5852062_5852137_5863241_5863372_5870040
transcript_119090.known	chr6	+	411	3	FSM	ENSG00000233064.2	ENST00000454882.2	411	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGTGTAATATTTCATT	5851456	True	NA	NA	False	AATACA	-36	NA	5851505	5870220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_5851663_5852062_5852137_5870040
transcript_119093.known	chr6	-	1582	3	FSM	ENSG00000124785.9	ENST00000244766.7	1582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGGTGTCGTTTGTTTCC	-6006912	True	NA	NA	False	AATAAA	-16	NA	6006925	5997998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_5999205_6002352_6002498_6006694
transcript_119094.known	chr6	-	3828	15	FSM	ENSG00000124491.16	ENST00000264870.8	3828	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.0861545523586	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATCTGTGCAGAAGTG	-6320579	True	NA	NA	False	AATAAA	-16	NA	6320662	6144083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_6145773_6151812_6151950_6167457_6167619_6174579_6174868_6181987_6182142_6195796_6195886_6197222_6197327_6222032_6222172_6224685_6224861_6248311_6248420_6250810_6250930_6266557_6266810_6305350_6305540_6318534_6318683_6320586
transcript_119095.known	chr6	-	631	3	FSM	ENSG00000124491.16	ENST00000451619.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTGCTTAACTAAATTA	-6320559	False	NA	NA	False	AATAAA	-17	NA	6320642	6305112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_6305540_6318534_6318683_6320586
transcript_119096.known	chr6	+	4461	2	FSM	ENSG00000288046.1	ENST00000655459.1	4461	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAAACTGTGAACTTTGG	NA	False	NA	NA	False	AGTAAA	-6	NA	6725035	6733191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_6725301_6728995
transcript_119097.known	chr6	-	1185	2	FSM	ENSG00000285771.1	ENST00000650292.1	1185	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACAACTTGGTGTGGTG	-7261964	False	NA	NA	False	AATAAA	-8	NA	7261993	7258909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7259857_7261755
transcript_119099.known	chr6	-	1808	10	FSM	ENSG00000124783.14	ENST00000474597.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	329.489841354108	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATGAATCTCTTGCTG	-7300281	True	NA	NA	False	AATAAA	-22	NA	7313207	7268305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7269155_7289867_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_119100.known	chr6	-	9661	8	FSM	ENSG00000124783.14	ENST00000244763.9	9661	8	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_4	13.3920475945805	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTGCAACATGAAATG	-7300273	True	NA	-14	True	ATTAAA	-17	NA	7313199	7281142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_119101.known	chr6	-	3248	9	FSM	ENSG00000124783.14	ENST00000397511.6	3248	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	303.367351572314	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTATAGCTTCCTC	-7300272	True	NA	-11	True	CATAAA	-14	NA	7313198	7287569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7289932_7295087_7295103_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_119102.known	chr6	-	1893	8	FSM	ENSG00000124783.14	ENST00000489567.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	241.935477989906	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAGTAAAATAGTATGAA	-7300248	True	NA	-27	True	NA	NA	NA	7313174	7288681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7289932_7295391_7295486_7297922_7298002_7298746_7298824_7301309_7301369_7303549_7303638_7309916_7310030_7313041
transcript_119103.known	chr6	-	1118	8	FSM	ENSG00000124783.14	ENST00000479365.5	1118	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	246.187749823717	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGTTTTTTTTTAAACC	-7300256	True	NA	-55	True	NA	NA	NA	7313182	7289675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7289932_7295384_7295486_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_119104.known	chr6	-	1094	7	FSM	ENSG00000124783.14	ENST00000462112.1	1094	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	260.753661953619	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAAAAGAACTAATACA	-7300262	True	NA	NA	False	AATAAA	-13	NA	7313188	7296882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7297210_7297922_7298002_7298746_7298824_7301309_7301573_7303549_7303638_7309916_7310030_7313041
transcript_119114.known	chr6	+	2498	17	FSM	ENSG00000124784.9	ENST00000379834.7	2498	17	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_3	39.9107891897667	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTGGCATATTCATTCA	7384043	True	NA	10	True	CATAAA	-17	NA	7389807	7418037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237_7414391_7417330
transcript_11912.nic	chr1	+	1984	6	NIC	ENSG00000143294.15	novel	2068	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_3	443.570332641848	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGCCTGCCCTGTCCCTG	156757653	True	NA	18	True	AATAAA	-18	NA	156767522	156800815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_156768240_156782281_156782330_156786607_156787175_156794664_156794809_156797275_156797342_156800373
transcript_119121.nic	chr6	+	1817	16	ISM	ENSG00000124784.9	ENST00000379834.7	2498	17	-26	3647	-11	2823	5prime_fragment	TRUE	canonical	3	327	junction_3	41.0607138542698	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGCAATGAAATACCTTC	7384017	True	NA	NA	False	GATAAA	-4	NA	7389781	7414390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_7390074_7393098_7393304_7395052_7395144_7396702_7396773_7398697_7398741_7400957_7401051_7402602_7402716_7402816_7402898_7403940_7404028_7404417_7404556_7404917_7405022_7405248_7405356_7410385_7410452_7411331_7411452_7412888_7412943_7414237
transcript_119131.nnic	chr6	-	1400	2	NNC	ENSG00000261189.2	novel	911	2	NA	NA	69	82	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGGGGGGGACTTTCT	-7542998	False	NA	90	True	AATAAA	-24	NA	7543012	7540362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_7541054_7542303
transcript_119132.nnic	chr6	-	1309	2	NNC	ENSG00000261189.2	novel	911	2	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	-7542998	False	NA	-1	True	AATAAA	-18	NA	7543012	7540453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_7541054_7542303
transcript_119133.nnic	chr6	-	948	2	FSM	ENSG00000261189.2	ENST00000690863.1	911	2	-37	0	-37	0	multi-exon	FALSE	canonical	3	7	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGCCGCTAATTACCTTC	-7543104	True	NA	-1	True	AATAAA	-18	NA	7543118	7540453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7541054_7542770
transcript_119134.known	chr6	-	888	1	FSM	ENSG00000261189.2	ENST00000561592.1	888	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGCTAATTACCTTCTGA	-7541324	False	NA	2	True	AATAAA	-21	NA	7541338	7540450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7540400_7541300
transcript_119135.known	chr6	+	7812	24	FSM	ENSG00000096696.15	ENST00000418664.2	7812	24	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_23	40.1124600566438	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTTTGTGTTTTAATTT	7539992	True	NA	19	True	AATAAA	-15	NA	7541616	7586572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7542086_7555717_7555821_7558115_7558265_7559225_7559401_7562651_7562781_7563735_7563787_7565358_7565521_7566376_7566482_7567353_7567450_7567780_7567907_7568436_7568590_7569185_7569341_7570436_7570564_7571382_7571585_7571841_7572069_7574085_7574253_7574656_7574796_7575294_7575489_7576293_7576457_7576958_7577043_7577778_7577887_7578463_7578563_7579274_7579773_7582641
transcript_119140.known	chr6	+	4174	9	FSM	ENSG00000168566.13	ENST00000342415.6	4174	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_8	12.9801531192818	160	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTTATTAGTGATTGT	7585787	True	NA	9	True	ATTAAA	-22	NA	7590197	7611967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_7590414_7593733_7593848_7594098_7594160_7595026_7595102_7601335_7601525_7602622_7602745_7605397_7605487_7606030_7606196_7608824
transcript_119141.known	chr6	-	3030	13	FSM	ENSG00000259040.5	ENST00000439343.2	3030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	495.681097077546	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGTCTGGTCTTTCCTT	-8059357	True	NA	-8	True	AATAAA	-12	NA	8064364	7881521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_119142.nnic	chr6	-	1021	4	NNC	ENSG00000188428.20	novel	2659	5	NA	NA	-29	1252	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	131.940222154664	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TACATAAATATAAAAATACA	-8059418	True	NA	NA	False	AATAAA	-15	NA	8064425	8012314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_8012979_8041155_8041269_8062533_8062617_8064264
transcript_119143.nnic	chr6	-	2222	4	NIC	ENSG00000188428.20	novel	2445	6	NA	NA	-29	-3	combination_of_known_splicesites	FALSE	canonical	3	14	junction_1	125.573351737806	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTATTTGAGATTTTTTT	-8059418	True	NA	NA	False	ATTAAA	-20	NA	8064425	8013980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_8015829_8041138_8041269_8062533_8062617_8064264
transcript_119146.known	chr6	-	1301	10	FSM	ENSG00000239264.9	ENST00000473453.2	1301	10	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_9	305.886971782345	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACAGTTGGAGGTCACC	-7910063	False	15697	NA	False	NA	NA	NA	7910077	7883143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7909812
transcript_119147.known	chr6	-	2938	10	FSM	ENSG00000239264.9	ENST00000379757.9	2938	10	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_1	117.387403366527	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTCTTTCCTTCAATG	-7895091	True	NA	-3	True	AATAAA	-17	NA	7910788	7881516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_7883267_7884358_7884489_7885960_7886044_7888704_7888849_7889494_7889582_7891620_7891737_7895105_7895203_7899575_7899682_7904573_7904724_7910513
transcript_119152.known	chr6	-	2445	6	FSM	ENSG00000188428.20	ENST00000244777.6	2445	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	133.63382805263	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTTTTTCAA	-8059386	True	NA	NA	False	ATTAAA	-23	NA	8064393	8013977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8027206_8027400_8041138_8041269_8062533_8062617_8064264
transcript_119155.known	chr6	-	1273	6	FSM	ENSG00000188428.20	ENST00000627748.2	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	136.877463448151	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCATATTTTACAGTGCA	-8059389	True	NA	NA	False	NA	NA	NA	8064396	8015062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8054269_8054373_8062533_8062617_8064264
transcript_11916.known	chr1	-	966	6	FSM	ENSG00000143321.19	ENST00000482651.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	545.373486704295	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCTGGGGCCTGGGAC	-156747417	False	NA	NA	False	NA	NA	NA	156747471	156743155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156747434
transcript_119162.known	chr6	-	2659	5	FSM	ENSG00000188428.20	ENST00000397457.7	2659	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	34.2810078614967	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTGTTTATTATTCCA	-8059382	True	NA	-1	True	AATAAA	-13	NA	8064389	8013566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8041138_8041269_8062533_8062617_8064264
transcript_119171.known	chr6	-	368	4	FSM	ENSG00000188428.20	ENST00000543936.7	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	135.884755092934	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAGCCATGGAAAGGCT	-8059378	True	NA	NA	False	NA	NA	NA	8064385	8015723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8015829_8026366_8026426_8062533_8062617_8064264
transcript_11918.known	chr1	-	2171	6	FSM	ENSG00000143321.19	ENST00000368209.9	2171	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	535.78376235194	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGGATTCTGACTGATT	-156751769	True	NA	-7	True	AATAAA	-15	NA	156752233	156742109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752037
transcript_119183.known	chr6	-	654	3	FSM	ENSG00000124802.12	ENST00000507463.1	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	1777	junction_2	118	3797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGCATTTTCAGCTTAT	-8081983	True	NA	1	True	AATAAA	-33	NA	8102559	8089953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8090282_8097266_8097468_8102434
transcript_119184.known	chr6	-	1047	4	FSM	ENSG00000124802.12	ENST00000379715.10	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	1549	junction_1	189.436591560929	11191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTCGTTGTTTCTTTCT	-8081972	True	NA	-2	True	AGTAAA	-17	NA	8102548	8079394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8080031_8090185_8090282_8097266_8097468_8102434
transcript_119185.known	chr6	-	562	4	FSM	ENSG00000124802.12	ENST00000429723.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	891.462219552174	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGAATCAGTTTTTAC	-8081972	True	NA	2	True	CATAAA	-16	NA	8102548	8073359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8073511_8090185_8090282_8097266_8097468_8102434
transcript_119189.known	chr6	-	2200	12	FSM	ENSG00000124786.12	ENST00000648867.1	2200	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	45.1965404951228	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAGATGTGTTAATAGA	-8432374	True	NA	-7	True	AATAAA	-18	NA	8435561	8413073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8418743_8418886_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435227
transcript_11919.known	chr1	-	960	6	FSM	ENSG00000143321.19	ENST00000368206.5	960	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	530.589483499249	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCTCTCCTCTTCTAC	-156752307	True	NA	NA	False	NA	NA	NA	156752448	156743344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_156743456_156743651_156743879_156744162_156744349_156745007_156745147_156745296_156745374_156752228
transcript_119195.known	chr6	-	3566	11	FSM	ENSG00000124786.12	ENST00000644923.2	3566	11	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_4	12.8296531519757	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCCTCTACACTTTCCT	-8432358	True	NA	NA	False	TATAAA	-21	NA	8435545	8411434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_119198.known	chr6	-	1911	10	FSM	ENSG00000124786.12	ENST00000648987.1	1911	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	32.2524762184584	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAGGCTGACAAGTGAG	-8432084	False	NA	NA	False	NA	NA	NA	8435271	8412884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435227
transcript_119199.nic	chr6	-	1911	10	NIC	ENSG00000124786.12	novel	3566	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_9	21.1660104885167	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTTAATAGAATTTTG	-8432382	True	NA	-1	True	AATAAA	-24	NA	8435569	8413067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_8413700_8414907_8414978_8416883_8416996_8417401_8417495_8419579_8419678_8420720_8420829_8422469_8422625_8427936_8428059_8429863_8430158_8435342
transcript_119214.nnic	chr6	-	2403	5	NNC	ENSG00000124786.12	novel	3566	11	NA	NA	-9	-11937	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	41.0327613011847	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCTGAATTTATTTCTG	-8432383	True	NA	NA	False	AATAAA	-19	NA	8435570	8425010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_8426724_8427936_8428059_8429863_8430158_8434384_8434431_8435342
transcript_119226.nic	chr6	-	950	3	ISM	ENSG00000124786.12	ENST00000644923.2	3566	11	-25	18047	-9	-16408	5prime_fragment	FALSE	canonical	3	81	junction_2	6.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	-8432383	True	NA	-9	True	AATAAA	-19	NA	8435570	8429481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_8430158_8434384_8434431_8435342
transcript_119227.nic	chr6	-	903	2	ISM	ENSG00000124786.12	ENST00000649788.1	2442	12	-32	18019	-8	-16408	5prime_fragment	FALSE	canonical	3	47	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCAGGATATTTTATGG	-8432382	True	NA	-9	True	AATAAA	-19	NA	8435569	8429481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_8430158_8435342
transcript_119229.known	chr6	+	979	4	FSM	ENSG00000285219.3	ENST00000643201.1	979	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGGACAGTTTGATTT	8435563	True	NA	NA	False	AATAAA	-27	NA	8435721	8501635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8436179_8437962_8438032_8493684_8493779_8501276
transcript_119230.known	chr6	+	1368	3	FSM	ENSG00000285219.3	ENST00000646488.1	1368	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTTAGTAATGATATCA	8435479	True	NA	NA	False	AATAAA	-16	NA	8435637	8470725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8436179_8437939_8438032_8469990
transcript_119231.known	chr6	+	1623	3	FSM	ENSG00000285219.3	ENST00000644038.1	1623	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTCTTTTGTGATTTT	8435481	True	NA	NA	False	AATAAA	-24	NA	8435639	8471005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_8436179_8437962_8438032_8469990
transcript_119236.known	chr6	+	4505	5	FSM	ENSG00000111846.20	ENST00000495262.7	4505	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	130.196966170491	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10521303	True	NA	14	True	AATAAA	-19	NA	10521350	10629368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10521418_10527473_10527661_10528630_10529837_10621350_10621444_10626416
transcript_119240.known	chr6	+	4579	3	FSM	ENSG00000111846.20	ENST00000316170.9	4579	3	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_1	85.5	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10553698	True	NA	14	True	AATAAA	-19	NA	10555808	10629368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10557343_10621350_10621444_10626416
transcript_119241.known	chr6	+	4200	3	FSM	ENSG00000111846.20	ENST00000265012.5	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	59	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGGGATACTGTGTATT	10582144	True	NA	14	True	AATAAA	-19	NA	10585759	10629368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10586915_10621350_10621444_10626416
transcript_119242.nnic	chr6	+	1769	2	NNC	ENSG00000111846.20	novel	779	2	NA	NA	-12	43081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGTTGTTATCTTTG	10553686	True	NA	NA	False	GATAAA	-19	NA	10555796	10573348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10557347_10573129
transcript_119244.nic	chr6	-	726	6	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	1.16619037896906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-10694321	True	NA	1	True	ATTAAA	-17	NA	10694625	10671421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10672546_10672637_10683186_10683233_10686965_10687165_10687479_10687562_10694493
transcript_11925.nic	chr1	-	1240	5	ISM	ENSG00000027869.12	ENST00000368198.7	1599	9	2684	0	-39	0	3prime_fragment	FALSE	canonical	3	23	junction_1	5.61248608016091	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-156813335	True	NA	-9	True	AATAAA	-30	NA	156814150	156806242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_156806574_156807174_156807346_156809202_156809491_156809660_156809808_156813847
transcript_119250.known	chr6	-	541	5	FSM	ENSG00000137434.12	ENST00000460742.6	541	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.58113883008419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGTCGTCTTTTGTTTTG	-10694229	True	NA	5	True	ATTAAA	-21	NA	10694533	10671417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10671599_10683186_10683233_10684848_10684924_10686965_10687165_10694493
transcript_119251.known	chr6	-	627	5	FSM	ENSG00000137434.12	ENST00000259983.8	627	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.11803398874989	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-10694312	True	NA	1	True	ATTAAA	-17	NA	10694616	10671421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10671599_10683186_10683233_10686965_10687165_10687479_10687562_10694493
transcript_119259.nic	chr6	-	567	4	NIC	ENSG00000137434.12	novel	627	5	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	0.816496580927726	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATTGTGTCGTCTTTTGT	-10694334	True	NA	1	True	ATTAAA	-17	NA	10694638	10671421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_10671599_10683186_10683233_10686965_10687165_10694493
transcript_119263.nnic	chr6	+	436	3	NNC	ENSG00000285763.1	novel	3467	6	NA	NA	48	-8450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCCTCCTTTCAGTGTG	10659509	True	NA	NA	False	AATACA	-18	NA	10659545	10684410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10659607_10672716_10672829_10684147
transcript_11927.nic	chr1	-	1410	4	NIC	ENSG00000027869.12	novel	1599	9	NA	NA	-39	0	intron_retention	FALSE	canonical	3	23	junction_1	6.16441400296898	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-156813335	True	NA	-9	True	AATAAA	-30	NA	156814150	156806242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156806574_156807174_156807346_156809202_156809808_156813847
transcript_119278.nnic	chr6	+	1675	9	NIC	ENSG00000111845.5	novel	1523	10	NA	NA	-315	0	combination_of_known_splicesites	FALSE	canonical	3	60	junction_1	264.158569802306	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10694594	True	NA	29	True	TATAAA	-23	NA	10694656	10709782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10695070_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_11928.nnic	chr1	-	952	4	NIC	ENSG00000027869.12	novel	1599	9	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_2	11.8415464455544	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCCTCCAGGCTCCT	-156813335	True	NA	-9	True	AATAAA	-30	NA	156814150	156806242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_156806574_156807174_156807346_156809660_156809808_156813847
transcript_119285.known	chr6	+	1523	10	FSM	ENSG00000111845.5	ENST00000379568.4	1523	10	0	0	0	0	multi-exon	FALSE	canonical	3	703	junction_1	66.3829146544854	4421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGGATGAAGGAGTCAT	10686696	True	NA	29	True	TATAAA	-23	NA	10694971	10709782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10695070_10697323_10697487_10702368_10702490_10702564_10702640_10703404_10703458_10704506_10704653_10704746_10704845_10707414_10707515_10708952_10709077_10709237
transcript_119297.known	chr6	+	472	4	FSM	ENSG00000111843.14	ENST00000466421.5	472	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	473.738558935435	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	10712765	True	NA	NA	False	AATATA	-30	NA	10723108	10730763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10723242_10725906_10726009_10728639_10728728_10730614
transcript_119300.known	chr6	+	1016	6	FSM	ENSG00000111843.14	ENST00000229563.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	97.5512173168536	12939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGGGTCTTCA	10712726	True	NA	NA	False	AATAAA	-16	NA	10723069	10731127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10723242_10724569_10724634_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_119301.known	chr6	+	899	5	FSM	ENSG00000111843.14	ENST00000467415.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	433.327459896093	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGGGTCTTCATT	10712781	True	NA	NA	False	AATAAA	-18	NA	10723124	10731129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10723242_10724960_10725038_10725906_10726009_10728639_10728728_10730614
transcript_119302.known	chr6	-	1150	2	FSM	ENSG00000272097.2	ENST00000659819.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTATCTATACTTAACTT	-10747587	True	NA	NA	False	AATAAA	-25	NA	10747619	10743323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10744315_10747460
transcript_119303.known	chr6	-	480	2	FSM	ENSG00000272097.2	ENST00000606652.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGCATATTCTTAAAGAC	NA	False	NA	NA	False	AATAAA	-9	NA	10747663	10746952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_10747230_10747460
transcript_11931.known	chr1	-	1539	4	FSM	ENSG00000117036.12	ENST00000326786.4	1539	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTTGTGTACTGTACAG	-157138454	False	NA	NA	False	AATAAA	-23	NA	157138474	157133144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_157134228_157135470_157135709_157136306_157136366_157138315
transcript_119316.known	chr6	+	455	4	FSM	ENSG00000137210.14	ENST00000480194.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	362.189944028759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGACATTTTACCTAAAAA	10738082	True	NA	NA	False	NA	NA	NA	10747772	10756615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747886_10751132_10751235_10755141_10755233_10756466
transcript_11932.known	chr1	+	1459	2	FSM	ENSG00000271736.2	ENST00000670336.1	1459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGGGCAATTTGTATATAA	157274843	False	NA	NA	False	AATAAA	-21	NA	157274854	157283968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_157274923_157282577
transcript_119328.known	chr6	+	787	5	FSM	ENSG00000137210.14	ENST00000379530.7	787	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	347.737329028679	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATCAATGAAAATAAAGTT	10738120	True	NA	NA	False	NA	NA	NA	10747810	10756947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10755141_10755233_10756466
transcript_119329.known	chr6	+	929	6	FSM	ENSG00000137210.14	ENST00000379542.10	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_4	94.3071577347128	9623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	10738114	True	NA	NA	False	AATAAA	-18	NA	10747804	10756981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_119330.known	chr6	+	888	5	FSM	ENSG00000137210.14	ENST00000612333.4	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	347.891506076248	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATAATATTTCCTATGG	10738068	True	NA	NA	False	AATAAA	-8	NA	10747758	10756971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10751132_10751235_10755141_10755233_10756466
transcript_119331.known	chr6	+	502	5	FSM	ENSG00000137210.14	ENST00000463100.5	502	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	440.504540271721	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATGTGAATTAATAAAT	10738120	True	NA	-33	True	NA	NA	NA	10747810	10829165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10749621_10749699_10770076_10770205_10829006
transcript_119332.known	chr6	+	730	4	FSM	ENSG00000137210.14	ENST00000473276.5	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	378.465615640605	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAATATTTCCTATGGTG	10738126	True	NA	NA	False	AATAAA	-10	NA	10747816	10756973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749201_10749269_10755141_10755233_10756466
transcript_119333.known	chr6	+	483	4	FSM	ENSG00000137210.14	ENST00000467229.1	483	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	328.622715113987	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGCTTTGCAGGTATTT	10751131	True	NA	7	True	AATAAA	-22	NA	10751169	10829205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10751235_10755141_10755233_10770076_10770205_10829006
transcript_119334.known	chr6	+	871	5	FSM	ENSG00000137210.14	ENST00000491103.5	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	337.122381339477	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAGTTTACTATAAATA	10738082	True	NA	NA	False	AATGAA	-1	NA	10747772	10756958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10747882_10749621_10749699_10751132_10751235_10755141_10755233_10756466
transcript_119339.nnic	chr6	+	591	4	NIC	ENSG00000137210.14	novel	752	7	NA	NA	-12	1	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	15.5777619273972	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCTTTGCAGGTATTTT	10738056	True	NA	8	True	AATAAA	-23	NA	10747746	10829206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10770076_10770205_10827696_10827825_10829006
transcript_119341.nnic	chr6	+	563	4	NIC	ENSG00000137210.14	novel	502	5	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	385.849999640044	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	10738020	True	NA	5	True	AATAAA	-20	NA	10747710	10829203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10749201_10749269_10770076_10770205_10829006
transcript_119343.nnic	chr6	+	567	3	NIC	ENSG00000137210.14	novel	374	3	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	23	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	NA	False	NA	5	True	AATAAA	-20	NA	10747639	10829203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_119344.nnic	chr6	+	625	3	NNC	ENSG00000137210.14	novel	1589	5	NA	NA	-189	4876	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	21.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTATGTATGTGTA	NA	False	NA	10	True	AATAAA	-20	NA	10747569	10857629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_10747882_10770076_10770205_10857444
transcript_119345.nnic	chr6	+	751	3	NIC	ENSG00000137210.14	novel	730	4	NA	NA	-48	-2	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	429	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCCTATGGTGTCTTCA	10738020	True	NA	NA	False	AATAAA	-16	NA	10747710	10756979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10749201_10749269_10756466
transcript_119349.nnic	chr6	+	629	2	NIC	ENSG00000137210.14	novel	929	6	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	28	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTATGGTGTCTTCATT	10738077	True	NA	NA	False	AATAAA	-18	NA	10747767	10756981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10756466
transcript_119354.nnic	chr6	+	419	3	NIC	ENSG00000137210.14	novel	374	3	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	23	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTAAGCTTTGCAGGTAT	10738097	True	NA	5	True	AATAAA	-20	NA	10747787	10829203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_10747882_10770076_10770205_10829006
transcript_119357.known	chr6	+	2909	30	FSM	ENSG00000153157.13	ENST00000283141.11	2909	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.49030288683336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTGGATGTGTCTCTT	10886268	True	NA	117	True	AATAAA	-25	NA	10887051	10974309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10910823_10910870_10912672_10912766_10912866_10912928_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
transcript_11936.known	chr1	+	3607	7	FSM	ENSG00000158473.8	ENST00000368171.5	3607	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	13.6585341656986	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCTTCCTTCAAATAA	158177864	True	NA	NA	False	AATAAA	-20	NA	158178029	158186427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_158178069_158180818_158181163_158181454_158181722_158182031_158182311_158182877_158183157_158183935_158184036_158184128
transcript_119360.known	chr6	+	3069	30	FSM	ENSG00000153157.13	ENST00000341041.8	3069	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.4575468143611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTTGGAGTGGTGTT	NA	False	NA	2	True	ATTAAA	-39	NA	10886830	10974194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_10887136_10891512_10891582_10893866_10894005_10894084_10894205_10898010_10898116_10898823_10898849_10902676_10902763_10902874_10902964_10906019_10906055_10907541_10907685_10910147_10910201_10912672_10912766_10912866_10912928_10922690_10922791_10924495_10924642_10926338_10926433_10927239_10927368_10928402_10928451_10930369_10930515_10931439_10931490_10935057_10935188_10942458_10942530_10942676_10942747_10955115_10955218_10956135_10956243_10958783_10958876_10961304_10961405_10961499_10961559_10963781_10963844_10973951
transcript_119362.nnic	chr6	-	634	5	NNC	ENSG00000197977.4	novel	3988	8	NA	NA	-49	-18983	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.75925291729789	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTATTTGCTTATATT	-11044308	False	NA	-1	True	AATAAA	-14	NA	11044354	10999741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_10999919_11000086_11000165_11005371_11005560_11010745_11010810_11044227
transcript_119365.known	chr6	+	4887	2	FSM	ENSG00000224531.6	ENST00000416247.4	4887	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGTTATGTGTCTCTGG	11092653	True	NA	NA	False	AATAAA	-16	NA	11093833	11138733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_11094390_11134402
transcript_119367.known	chr6	+	1251	3	FSM	ENSG00000224531.6	ENST00000376935.4	1251	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAAAGCATTGTGTCATA	11093971	False	NA	3	True	AATAAA	-19	NA	11094230	11135811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_11094390_11134402_11134988_11135304
transcript_119368.known	chr6	-	4522	7	FSM	ENSG00000111859.17	ENST00000379446.10	4522	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.04841577054135	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACTGGGTTTTCTTTTTC	-11230890	True	NA	-3	True	ATTAAA	-23	NA	11232668	11183297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_11185672_11188217_11188308_11189963_11191206_11192344_11192447_11193590_11193693_11213280_11213728_11232503
transcript_119369.known	chr6	-	3341	3	FSM	ENSG00000111859.17	ENST00000379433.5	3341	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGAGGAAGGAGGGCA	-11230880	True	NA	NA	False	NA	NA	NA	11232658	11198307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_11201047_11213280_11213728_11232503
transcript_119373.known	chr6	-	942	3	FSM	ENSG00000111863.13	ENST00000513651.5	942	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATTTCAGTAAGCTAGT	NA	False	NA	NA	False	TTTAAA	-25	NA	11728557	11713953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_11714513_11723348_11723501_11728326
transcript_119374.known	chr6	+	579	4	FSM	ENSG00000095951.17	ENST00000491710.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTCAAAATCTGAAGAAT	12008530	True	NA	NA	False	NA	NA	NA	12008761	12120157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12008876_12015525_12015669_12089183_12089238_12119889
transcript_119375.known	chr6	+	585	4	FSM	ENSG00000095951.17	ENST00000487103.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGTAGATGGAGATCCGAA	12011552	True	NA	NA	False	NA	NA	NA	12011999	12120222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12012055_12015525_12015669_12089183_12089238_12119889
transcript_119377.known	chr6	+	576	4	FSM	ENSG00000095951.17	ENST00000478545.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCCCAAAGAAGCCCTTG	12012637	True	NA	NA	False	NA	NA	NA	12012701	12120180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12012790_12015525_12015669_12089183_12089238_12119889
transcript_119378.known	chr6	+	2035	5	FSM	ENSG00000078401.7	ENST00000379375.6	2035	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.08972473588517	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTGGAATCATTACTG	12290285	True	NA	8	True	AATAAA	-20	NA	12290360	12297194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12290694_12292340_12292510_12293940_12294097_12294260_12294405_12295961
transcript_119379.known	chr6	+	615	1	FSM	ENSG00000212802.4	ENST00000391491.2	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35993	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAGTAAAGTCTGTAAAA	12512043	True	NA	NA	False	NA	NA	NA	12514109	12514724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_12514100_12514700
transcript_11938.known	chr1	+	2442	6	FSM	ENSG00000158481.13	ENST00000368170.8	2442	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTATTTTTCTTCA	NA	False	NA	NA	False	AATAAA	-16	NA	158289922	158294774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_158290126_158291133_158291401_158292083_158292366_158292595_158292875_158293211_158293303_158293454
transcript_119380.known	chr6	+	3045	13	FSM	ENSG00000112137.19	ENST00000675203.2	3045	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.986013297183269	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGTGTCCAGTGTCAT	NA	False	NA	NA	False	NA	NA	NA	13013553	13287837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13014140_13053364_13053530_13160203_13160285_13182518_13182687_13184798_13185006_13205814_13206137_13227815_13228064_13230036_13230194_13272859_13272916_13278267_13278330_13283421_13283563_13286145_13286223_13287062
transcript_119392.nic	chr6	-	1298	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	234.084757020588	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323109	True	NA	0	True	AATAAA	-16	NA	13328549	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_119393.nic	chr6	-	1273	8	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	230.436763648547	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323104	True	NA	0	True	AATAAA	-16	NA	13328544	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_119396.nic	chr6	-	1212	8	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	251.767385351103	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323126	True	NA	0	True	AATAAA	-16	NA	13328566	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326964_13328455
transcript_119403.nic	chr6	-	1217	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	256.301038277691	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323109	True	NA	0	True	AATAAA	-16	NA	13328549	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328295
transcript_119404.nic	chr6	-	1192	7	NIC	ENSG00000145979.18	novel	1282	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	253.487288745522	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323104	True	NA	0	True	AATAAA	-16	NA	13328544	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328315
transcript_119406.nic	chr6	-	1131	7	NIC	ENSG00000145979.18	novel	1116	8	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_2	270.77958441015	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323126	True	NA	0	True	AATAAA	-16	NA	13328566	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_13305188_13306397_13306528_13307595_13307746_13316570_13316709_13320907_13321096_13326786_13326964_13328455
transcript_119429.known	chr6	-	1877	6	FSM	ENSG00000145979.18	ENST00000607532.5	1877	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	173.887779904167	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGAAGCTTTTACATAAA	-13323104	True	NA	NA	False	CATAAA	-8	NA	13328544	13306644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_119435.known	chr6	-	1084	7	FSM	ENSG00000145979.18	ENST00000379307.6	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	245.633025738261	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323143	False	NA	-3	True	AATAAA	-13	NA	13328583	13304953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13326786_13326907_13328455
transcript_119436.known	chr6	-	1116	8	FSM	ENSG00000145979.18	ENST00000356436.8	1116	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	219.376388884492	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323091	True	NA	0	True	AATAAA	-16	NA	13328531	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_119437.known	chr6	-	1282	8	FSM	ENSG00000145979.18	ENST00000379300.8	1282	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	234.611793986473	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGTTGCTGTGTTG	-13323097	True	NA	0	True	AATAAA	-16	NA	13328537	13304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328295
transcript_119438.known	chr6	-	1027	7	FSM	ENSG00000145979.18	ENST00000343141.8	1027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	253.13237643573	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATGCCTGGTGTTGCTGTG	-13323143	False	NA	-3	True	AATAAA	-13	NA	13328583	13304953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13305188_13306397_13306528_13307599_13307746_13320907_13321096_13325093_13325175_13326786_13326907_13328455
transcript_119439.known	chr6	-	972	7	FSM	ENSG00000145979.18	ENST00000422136.5	972	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.243106895324	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGCACTGAACAGTGCA	-13323091	True	NA	-42	True	AATAAA	-3	NA	13328531	13306444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13306528_13307599_13307746_13316570_13316709_13320907_13321096_13325093_13325175_13326786_13326907_13328315
transcript_119440.known	chr6	-	8796	2	FSM	ENSG00000145990.11	ENST00000379287.4	8796	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCAGCTCTTTGCCTGTTT	-13486906	True	NA	NA	False	AATAAA	-20	NA	13487600	13357829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13365663_13486637
transcript_119441.known	chr6	-	2388	2	FSM	ENSG00000145990.11	ENST00000603223.1	2388	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTGTGATGTATTCCT	-13487646	True	NA	NA	False	AATAAA	-32	NA	13487662	13469267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13470631_13486637
transcript_119442.known	chr6	-	1427	2	FSM	ENSG00000145990.11	ENST00000605067.1	1427	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTGTGATGTATTCCT	NA	False	NA	NA	False	AATAAA	-32	NA	13472044	13469267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13470631_13471980
transcript_119443.known	chr6	+	3900	10	FSM	ENSG00000124523.17	ENST00000680432.1	3900	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	57.9184185719581	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACGTATGTGTATATACCA	NA	False	NA	NA	False	AATAAA	-18	NA	13574226	13614558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574307_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_119453.known	chr6	+	4564	10	FSM	ENSG00000124523.17	ENST00000606117.2	4564	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	58.8049716551077	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCCAAGGCGGCCTG	13572682	True	NA	NA	False	NA	NA	NA	13574600	13615158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574745_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13611789
transcript_119460.known	chr6	-	1045	1	FSM	ENSG00000261071.1	ENST00000566170.1	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATCTTACACATATATT	-13614987	True	NA	-13	True	AATAAA	-16	NA	13615155	13614110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13614100_13615200
transcript_119461.known	chr6	+	2339	10	FSM	ENSG00000124523.17	ENST00000379262.8	2339	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	62.1880858741557	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTTTTGACTGTTA	13572682	True	NA	27	True	AATAAA	-24	NA	13574600	13605739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13574625_13579450_13579610_13584075_13584226_13588330_13588465_13591668_13591895_13595476_13595565_13596962_13597017_13599031_13599156_13600833_13600950_13604475
transcript_119465.known	chr6	+	1683	8	FSM	ENSG00000225921.7	ENST00000451315.7	1683	8	0	0	0	0	multi-exon	FALSE	canonical	3	1659	junction_7	116.960834191168	1846	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACAGAAGTCATCTGTAGT	13583553	True	NA	64	True	AATACA	-22	NA	13615334	13621712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_13615625_13615711_13615773_13616462_13616522_13617769_13617802_13618057_13618140_13620207_13620330_13620407_13620486_13620753
transcript_119467.known	chr6	-	5471	9	FSM	ENSG00000050393.12	ENST00000379170.9	5460	9	-11	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	33.7305499510459	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTAACTTTTCATCATT	-13814522	False	NA	-5	True	AATAAA	-16	NA	13814568	13786556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_13790865_13791877_13791993_13793893_13793948_13798832_13798905_13800340_13800383_13801287_13801390_13802242_13802347_13806924_13807045_13814014
transcript_119468.known	chr6	+	2328	5	FSM	ENSG00000112149.10	ENST00000379153.4	2328	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	11.6270159542335	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGTTGTAAACCAGTTTG	14116343	True	NA	NA	False	AATAAA	-45	NA	14117771	14136906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_14117849_14117949_14118066_14131519_14131749_14133648_14133756_14135107
transcript_11948.known	chr1	+	3739	9	FSM	ENSG00000162706.13	ENST00000368125.9	3739	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	4.98591766879478	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTGTTCACTTCCT	159171432	True	NA	NA	False	AATATA	-14	NA	159171614	159203313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159171854_159191935_159192077_159192577_159192731_159193422_159193561_159193869_159194041_159196363_159196455_159196890_159197061_159199750_159199877_159200803
transcript_119482.nnic	chr6	+	1172	4	NNC	ENSG00000286277.1	novel	1296	3	NA	NA	-131546	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	2.16024689946929	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTCTCTCATCTCTT	14300126	False	NA	4	True	AATAAA	-15	NA	14300136	14502701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_14300301_14456974_14457079_14498056_14498166_14501906
transcript_119483.nnic	chr6	+	1058	3	NNC	ENSG00000286277.1	novel	1296	3	NA	NA	-131536	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTCTCTCTCATCTCTT	14299902	True	NA	4	True	AATAAA	-15	NA	14300146	14502701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_14300301_14498056_14498166_14501906
transcript_1195.known	chr1	+	3028	7	FSM	ENSG00000157916.20	ENST00000605895.6	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	115.149178604684	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAATTACTTCTCAAC	2381573	True	NA	24	True	AATAAA	-16	NA	2391840	2405436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402206_2402343_2403034
transcript_119504.nnic	chr6	-	599	4	NNC	ENSG00000234261.5	novel	1041	4	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.0720922897661	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTTGTGTGCTAGATAA	-15022013	False	NA	NA	False	ATTAAA	-15	NA	15022036	14872827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14872980_14873304_14873472_14997415_14997476_15021816
transcript_119511.nnic	chr6	-	564	4	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-59	-7837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.42809041582063	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	-15020717	True	NA	NA	False	AATAAA	-21	NA	15022023	14880664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14880802_14997415_14997476_15008924_15009085_15021816
transcript_119516.nnic	chr6	-	417	3	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-72	-7837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	-15022013	False	NA	NA	False	AATAAA	-21	NA	15022036	14880664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14880802_14997415_14997476_15021816
transcript_119517.nnic	chr6	-	400	3	NNC	ENSG00000234261.5	novel	778	4	NA	NA	-59	-7837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	-15020717	True	NA	NA	False	AATAAA	-21	NA	15022023	14880664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14880802_14997415_14997476_15021820
transcript_119519.nnic	chr6	-	504	3	NNC	ENSG00000234261.5	novel	1194	2	NA	NA	-59	-7837	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTGAGACTATGGAGACT	-15020717	True	NA	NA	False	AATAAA	-21	NA	15022023	14880664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14880802_15008924_15009085_15021816
transcript_119522.nnic	chr6	-	1386	3	NNC	ENSG00000234261.5	novel	1915	5	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	3.5	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	-15022013	False	NA	-4	True	AATAAA	-13	NA	15022036	14976212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14977319_14997415_14997476_15021816
transcript_119523.nic	chr6	-	1369	3	NIC	ENSG00000234261.5	novel	1915	5	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	8	70	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTCGGTGTCTGAGGGG	-15020717	True	NA	-4	True	AATAAA	-13	NA	15022023	14976212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_14977319_14997415_14997476_15021820
transcript_119527.nnic	chr6	-	1317	2	NNC	ENSG00000234261.5	novel	1673	3	NA	NA	-59	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGTGTCTGAGGGGTTTT	-15020717	True	NA	0	True	AATAAA	-17	NA	15022023	14976208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_14977319_15021816
transcript_119529.known	chr6	-	1078	1	FSM	ENSG00000271888.1	ENST00000607711.1	1078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTTATTATTTTTACC	-15244800	False	NA	1	True	AATAAA	-20	NA	15245000	15243922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15243900_15245000
transcript_119533.nic	chr6	+	1718	3	ISM	ENSG00000008083.14	ENST00000341776.7	6003	18	-94	110847	-94	-97198	5prime_fragment	FALSE	canonical	3	288	junction_2	14.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCTTGTCAGTTCATCT	15213260	True	NA	NA	False	AAGAAA	-8	NA	15245974	15411195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_15246585_15374116_15374253_15410223
transcript_119536.known	chr6	+	5595	18	FSM	ENSG00000008083.14	ENST00000397311.4	5595	18	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	172.253876368213	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATGACTGAATGGAATGA	15248537	True	NA	33	True	AATAAA	-35	NA	15248854	15522040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_15248965_15374116_15374253_15410223_15410366_15452005_15452176_15468541_15468719_15487306_15487543_15496131_15497171_15500906_15501410_15504499_15504593_15507135_15507255_15507345_15507417_15508339_15508455_15511295_15511402_15512207_15512391_15512914_15513046_15513238_15513423_15517160_15517269_15520068
transcript_119538.known	chr6	-	1518	11	FSM	ENSG00000047579.20	ENST00000513680.5	1518	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84.5364418461056	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAACAGCTAACAATAAA	-15661731	True	NA	-41	True	NA	NA	NA	15663058	15522842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15660382_15660522_15662813
transcript_11954.known	chr1	+	694	3	FSM	ENSG00000158716.9	ENST00000368108.7	694	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	271	2818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	159772823	True	NA	37	True	AATAAA	-19	NA	159780959	159782543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159780994_159781098_159781368_159782152
transcript_119543.nnic	chr6	-	1435	10	NIC	ENSG00000047579.20	novel	1383	10	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	61.0684699717568	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661749	True	NA	-5	True	AATAAA	-17	NA	15663076	15522806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_15523220_15524525_15524670_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_119544.nnic	chr6	-	1413	10	NIC	ENSG00000047579.20	novel	1404	10	NA	NA	-2	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	76.0862084159219	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661682	True	NA	-5	True	AATAAA	-17	NA	15663009	15522806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_15523220_15524525_15524670_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
transcript_119547.known	chr6	-	1306	9	FSM	ENSG00000047579.20	ENST00000515875.5	1306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	74.9306971474308	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGCTAACAATAAAGTGTGA	-15661703	True	NA	-35	True	NA	NA	NA	15663030	15522836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524668_15533235_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_119554.known	chr6	-	1305	8	FSM	ENSG00000047579.20	ENST00000622898.4	1305	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	67.5951332628047	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-15661731	True	NA	-8	True	AATAAA	-14	NA	15663058	15522809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15662813
transcript_119559.known	chr6	-	1010	4	FSM	ENSG00000047579.20	ENST00000462989.6	1010	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	73.5164380711325	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	NA	False	NA	-5	True	AATAAA	-17	NA	15586015	15522806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15585718
transcript_119560.nic	chr6	-	601	2	ISM	ENSG00000047579.20	ENST00000506844.1	1542	10	-89	136132	-2	-135577	5prime_fragment	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGCAGTCCATAATCAGA	-15661682	True	NA	NA	False	AATAAA	-29	NA	15663009	15660116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_15660522_15662813
transcript_119561.known	chr6	-	1383	10	FSM	ENSG00000047579.20	ENST00000344537.10	1383	10	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_2	44.7735040695573	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCGCACAGAGCTAG	-15661701	True	NA	-5	True	AATAAA	-17	NA	15663028	15522806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_119562.known	chr6	-	1359	9	FSM	ENSG00000047579.20	ENST00000355917.7	1359	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	64.0678351436975	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-15661731	True	NA	-8	True	AATAAA	-14	NA	15663058	15522809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15652086_15652141_15662813
transcript_119563.known	chr6	-	1404	10	FSM	ENSG00000047579.20	ENST00000510395.5	1404	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	66.0029928240258	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTGAGAGCGCACAGAGC	-15661680	True	NA	-8	True	AATAAA	-14	NA	15663007	15522809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15523220_15524525_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651409_15652086_15652141_15662813
transcript_119564.known	chr6	-	1880	9	FSM	ENSG00000047579.20	ENST00000338950.9	1880	9	0	0	0	0	multi-exon	FALSE	canonical	1	55	junction_1	47.4616621601056	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCTAGATTATCAAGGT	-15661648	True	NA	NA	False	NA	NA	NA	15662975	15523562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_15524670_15533239_15533396_15593058_15593082_15615266_15615400_15627342_15627476_15637743_15637805_15651312_15651364_15652086_15652141_15662813
transcript_119565.nnic	chr6	-	647	3	Antisense	novelGene_ENSG00000214027.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGCATGAATTGAAATC	-15961371	True	NA	NA	False	AATAAA	-15	NA	15961500	15904349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_15904596_15960935_15961020_15961183
transcript_119568.known	chr6	+	3072	7	FSM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	49.5098194525311	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATGTGTGTATTGTCA	16126077	True	NA	15	True	AATAAA	-15	NA	16129085	16148248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_16129410_16130556_16130748_16141624_16141811_16143019_16143218_16143698_16143864_16144896_16145318_16146661
transcript_11957.known	chr1	+	797	2	FSM	ENSG00000158716.9	ENST00000368107.2	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	0	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACGTTGCATGGTACTTTA	159772825	True	NA	37	True	AATAAA	-19	NA	159780961	159782543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_159781368_159782152
transcript_119570.nic	chr6	+	814	2	ISM	ENSG00000007944.15	ENST00000356840.8	3072	7	0	17202	0	-17202	5prime_fragment	FALSE	canonical	3	125	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACCACCCTACCCGAG	16126077	True	NA	111	True	NA	NA	NA	16129085	16131046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_16129410_16130556
transcript_119571.nnic	chr6	+	1113	6	NNC	ENSG00000137198.10	novel	793	2	NA	NA	499	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.53431361950185	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTTGCTGGAGTTTGTA	16258371	True	NA	11	True	AATATA	-23	NA	16258471	16295549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_16258649_16274414_16274497_16278783_16278891_16285792_16285836_16290461_16290622_16295005
transcript_119575.nnic	chr6	+	818	2	Intergenic	novelGene_53	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGCCGGGCGCAGTGG	16265692	False	NA	NA	False	AAAAAG	-4	NA	16265792	16266658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr6_+_16266098_16266145
transcript_119583.known	chr6	-	1648	2	FSM	ENSG00000124788.19	ENST00000498374.1	1648	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATTACCTTTTTTCTTCT	-16761209	True	NA	NA	False	AATAAA	-27	NA	16761491	16738464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_16739919_16761297
transcript_119584.known	chr6	+	821	3	FSM	ENSG00000286631.1	ENST00000654964.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTAGATATTTGTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	17015816	17034396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17015926_17018123_17018278_17033838
transcript_119585.known	chr6	+	2925	13	FSM	ENSG00000112186.13	ENST00000229922.7	2925	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	12.4105130165249	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTGATGAATTCTGGAT	17391304	True	NA	13	True	AATAAA	-22	NA	17393594	17557780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_119588.known	chr6	+	1404	11	FSM	ENSG00000112186.13	ENST00000465994.5	1404	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	25.1507455157894	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATACAGCACTGTTTC	17391421	True	NA	NA	False	NA	NA	NA	17393711	17556568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_11959.known	chr1	-	1603	5	FSM	ENSG00000158710.15	ENST00000368096.5	1603	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	257.916653204092	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCTGTGTCTGGGGCC	-159918988	False	NA	-1	True	AATAAA	-23	NA	159923717	159918106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159923435
transcript_119591.known	chr6	+	1430	10	FSM	ENSG00000112186.13	ENST00000489374.5	1430	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	28.8037206101513	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATGATGACTTGTGAAC	17391342	True	NA	-25	True	NA	NA	NA	17393632	17556659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17539268_17539459_17540972_17541149_17542836_17542961_17543060_17543144_17551463_17551605_17556358
transcript_119594.nnic	chr6	+	1075	8	NNC	ENSG00000112186.13	novel	891	9	NA	NA	-3	-10458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	30.6007869713396	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCACTTCACTGTGGTA	17391369	True	NA	NA	False	AATAAA	-19	NA	17393659	17528832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995_17463074_17507168_17507313_17507640_17507727_17513848_17513955_17528481
transcript_119599.nic	chr6	+	655	4	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-101	75979	-2	-75979	5prime_fragment	FALSE	canonical	3	85	junction_1	4.49691252107735	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGCAATGTGTCTTC	17391340	True	NA	NA	False	AAAAAG	-5	NA	17393630	17463311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_17393747_17421554_17421677_17426589_17426691_17462995
transcript_1196.known	chr1	+	1404	7	FSM	ENSG00000157916.20	ENST00000378512.5	1404	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	383.436399187952	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGAGATTATTTTGAC	2381622	True	NA	9	True	TATAAA	-18	NA	2391889	2403751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2391959_2395783_2395872_2397115_2397221_2399414_2399515_2400856_2400936_2402096_2402343_2403034
transcript_119600.nic	chr6	+	1260	3	ISM	ENSG00000112186.13	ENST00000476263.1	891	9	-89	111667	-2	-111667	5prime_fragment	FALSE	canonical	3	85	junction_1	5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAACTACTGTAGATCCAA	17391352	True	NA	NA	False	AAAACA	-31	NA	17393642	17427623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_17393747_17421554_17421677_17426589
transcript_119602.known	chr6	+	1088	1	FSM	ENSG00000272269.1	ENST00000606771.1	1088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGGCTTCATTAATGTT	17706197	False	NA	NA	False	AATAAA	-28	NA	17706256	17707344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_17706300_17707300
transcript_119603.known	chr6	-	1330	3	FSM	ENSG00000137177.20	ENST00000502704.2	1330	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	9.5	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTGTGAGTCATTATA	-17985991	True	NA	-2	True	AATAAA	-17	NA	17987623	17950405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_17951430_17987053_17987145_17987408
transcript_119613.known	chr6	-	3184	9	FSM	ENSG00000137364.5	ENST00000309983.5	3184	9	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_8	32.4489984437116	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGTTTCATTTTAT	-18148309	True	NA	0	True	ATTAAA	-24	NA	18155077	18128310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18130781_18132132_18132178_18133803_18133890_18138962_18139038_18139664_18139718_18143595_18143729_18147822_18147916_18148987_18149172_18155032
transcript_119614.known	chr6	-	1360	11	FSM	ENSG00000124795.17	ENST00000652576.1	1360	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	504.873092964955	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATTATACCAGCAAAGAG	-18264207	False	NA	NA	False	NA	NA	NA	18264267	18225665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264097
transcript_119615.known	chr6	-	3142	11	FSM	ENSG00000124795.17	ENST00000652689.1	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	1421	junction_10	101.068541099592	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTACATGTGAAAGTCT	-18232395	True	NA	-5	True	ATTAAA	-23	NA	18264530	18223859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_119619.nic	chr6	-	917	8	ISM	ENSG00000124795.17	ENST00000507591.2	3093	10	24	13141	-3	-437	5prime_fragment	FALSE	canonical	3	1421	junction_7	106.717823617009	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAACAGAAAGCTACTTC	-18232365	True	NA	-100	True	AAAAAG	-19	NA	18264500	18237486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842_18263997_18264384
transcript_11962.known	chr1	-	1375	5	FSM	ENSG00000158710.15	ENST00000368097.9	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	46.7031851162209	2646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACTCTGGCTGTGTCTGG	-159920778	True	NA	-5	True	AATAAA	-19	NA	159925507	159918110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159918942_159919273_159919377_159919660_159919836_159920329_159920538_159925449
transcript_119624.nic	chr6	-	312	3	ISM	ENSG00000124795.17	ENST00000515742.2	1906	4	-3	1838	-3	-1838	5prime_fragment	FALSE	canonical	3	1421	junction_2	124	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGAGGTTGACAATGCAA	-18232365	True	NA	15	True	AAAAAG	-1	NA	18264500	18258363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_18258406_18263842_18263997_18264384
transcript_119625.known	chr6	-	2851	10	FSM	ENSG00000124795.17	ENST00000651992.1	2851	10	0	0	0	0	multi-exon	FALSE	canonical	3	1568	junction_4	72.7513947089591	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATAAACCTTGTCAATAA	-18264148	False	32135	-62	True	ACTAAA	-40	NA	18264208	18224216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_18225731_18226173_18226243_18236451_18236601_18237380_18237517_18249650_18249840_18255730_18255852_18256360_18256456_18257952_18258063_18258303_18258406_18263842
transcript_119628.nic	chr6	+	1072	2	ISM	ENSG00000137393.10	ENST00000486622.1	457	3	-165	1807	-1	-1807	5prime_fragment	FALSE	canonical	3	8	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTAACATGCTGTAGTTAA	18386832	True	NA	NA	False	NA	NA	NA	18387348	18400288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_18387631_18399498
transcript_11963.known	chr1	-	4059	21	FSM	ENSG00000085552.18	ENST00000368094.6	4059	21	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_18	19.4486503387767	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTGTGTGTTATCTGT	-159943568	True	NA	-4	True	AATAAA	-15	NA	159945613	159927040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_159927527_159927759_159927888_159928157_159929019_159929350_159929394_159929637_159929815_159929890_159929976_159930188_159930440_159930691_159930868_159931137_159931262_159931452_159931604_159931811_159931929_159932511_159932653_159934189_159934333_159934424_159934571_159934680_159934823_159936398_159936517_159936753_159936909_159937685_159937839_159942962_159943152_159943396_159943629_159945572
transcript_119631.known	chr6	-	4325	13	FSM	ENSG00000172197.11	ENST00000324607.8	4325	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	7.56224173112709	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCAGTTGTTTTTTTTT	-20211350	True	NA	0	True	AATAAA	-42	NA	20212469	20099683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_20102413_20109597_20109750_20112875_20113009_20115287_20115353_20118436_20118541_20124407_20124601_20126516_20126701_20128698_20128754_20131143_20131200_20144219_20144316_20151184_20151263_20152623_20152770_20212135
transcript_119632.known	chr6	+	3272	16	FSM	ENSG00000145996.11	ENST00000274695.8	3272	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	16.9241444884717	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGTTTTTGAGAATTT	20530329	True	NA	23	True	AATAAA	-23	NA	20534456	21232404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20846074_20846179_20955418_20955586_21000226_21000373_21065047_21065229_21108400_21108464_21198020_21198105_21201109_21201275_21230847
transcript_119637.nnic	chr6	+	1055	9	NNC	ENSG00000145996.11	novel	3272	16	NA	NA	-2	230551	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	27.8780827891733	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAGCTCACATTGTAT	20530327	True	NA	NA	False	AATAAA	-30	NA	20534454	20790223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_20534575_20535350_20535395_20546345_20546524_20548592_20548706_20649292_20649378_20739518_20739616_20758594_20758644_20781144_20781266_20789975
transcript_119638.known	chr6	+	1673	6	FSM	ENSG00000145996.11	ENST00000613575.4	1673	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	44.1569926512212	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTGTGTTAAGATGCCTA	20530353	True	NA	NA	False	AATAAA	-16	NA	20534480	20559672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_20534575_20535086_20535200_20535350_20535395_20546345_20546524_20548592_20548706_20558541
transcript_119646.known	chr6	+	4869	1	FSM	ENSG00000124766.7	ENST00000244745.4	4869	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11775	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGACTTTTGTCGTTATT	21578645	True	NA	23	True	AATAAA	-24	NA	21593750	21598619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21593800_21598600
transcript_11965.known	chr1	-	2366	7	FSM	ENSG00000162729.14	ENST00000368086.5	2366	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	156.452779528592	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTGGCTGTGTCTTCCCT	-160098672	False	NA	NA	False	AATAAA	-19	NA	160098689	160091339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160091632_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_11966.known	chr1	-	2270	7	FSM	ENSG00000162729.14	ENST00000314485.12	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_5	60.8677984560711	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160095800	True	NA	NA	False	AATAAA	-16	NA	160098619	160091342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408
transcript_119702.nnic	chr6	+	1177	5	NNC	ENSG00000272168.9	novel	1288	7	NA	NA	-18384	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.20156211871642	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTCTGCATGCAGAAAT	21739971	True	NA	8	True	AATAAA	-25	NA	21740093	21755639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_21740154_21740774_21740937_21742916_21743043_21754699_21754817_21754927
transcript_119716.known	chr6	+	1455	3	FSM	ENSG00000272168.9	ENST00000659720.1	1455	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	52.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	21664076	True	NA	NA	False	NA	NA	NA	21666403	21784591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_21666646_21668646_21668900_21783631
transcript_119726.known	chr6	+	596	3	FSM	ENSG00000152954.12	ENST00000463207.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGTGCTGAGTTGGTAAG	24126179	True	NA	NA	False	NA	NA	NA	24126210	24129697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24126341_24128127_24128201_24129304
transcript_119728.known	chr6	-	4715	10	FSM	ENSG00000146038.12	ENST00000378454.8	4715	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	3.2659863237109	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCTAAGGGTGTTT	-24357931	True	NA	NA	False	AATAAA	-21	NA	24358059	24171754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24174835_24178329_24178633_24205001_24205103_24278048_24278212_24288851_24288907_24290931_24291079_24301714_24301847_24301967_24302045_24353568_24353624_24357457
transcript_119731.known	chr6	+	3980	12	FSM	ENSG00000124532.15	ENST00000443868.6	3980	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	292.067070300161	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384647	True	NA	9	True	AATAAA	-22	NA	24402907	24426194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24410726_24410800_24412285_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_119735.known	chr6	+	3939	11	FSM	ENSG00000124532.15	ENST00000378386.8	3939	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	28.318898283655	972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTATAAGTTCAGATTTC	24384675	True	NA	5	True	AATAAA	-18	NA	24402935	24426190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_119740.known	chr6	+	1740	10	FSM	ENSG00000124532.15	ENST00000378353.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_6	29.3030146344479	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGCTTATAGTCCTTTC	24384693	True	NA	8	True	AATAAA	-15	NA	24402953	24423476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24403237_24405167_24405242_24408407_24408445_24409460_24409574_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936
transcript_119748.known	chr6	+	3821	9	FSM	ENSG00000124532.15	ENST00000274747.11	3821	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	240.070822883582	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAGTTCAGATTTCTGTT	24384647	True	NA	9	True	AATAAA	-22	NA	24402907	24426194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24403237_24405167_24405242_24412221_24412396_24415032_24415164_24416396_24416514_24418083_24418237_24418460_24418579_24422936_24423051_24423583
transcript_119757.known	chr6	-	1935	7	FSM	ENSG00000111802.14	ENST00000378198.9	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_2	64.4663995168543	890	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTGTTTTAGTATGT	-24659663	True	NA	-9	True	AATAAA	-15	NA	24666899	24649978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24651070_24652982_24653154_24654411_24654531_24657811_24657904_24658560_24658735_24666525_24666612_24666697
transcript_119758.known	chr6	-	2452	5	FSM	ENSG00000112308.13	ENST00000378119.9	2452	5	0	0	0	0	multi-exon	FALSE	canonical	3	2454	junction_2	77.5145147698158	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAGTGTTAACTTTTT	-24719133	False	NA	-12	True	AATAAA	-41	NA	24719154	24704860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24706263_24708776_24708912_24714317_24714441_24716147_24716325_24718539
transcript_119760.known	chr6	+	4391	4	FSM	ENSG00000112304.11	ENST00000537591.5	4391	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	665.740690259103	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGGAGAAAAAAAAAAAA	24666904	False	NA	NA	False	AATAAA	-36	NA	24667034	24705065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24667345_24687404_24687694_24697882_24698068_24701458
transcript_119762.known	chr6	+	4041	3	FSM	ENSG00000112304.11	ENST00000230048.5	4041	3	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	49	8102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGCTTTTCTTCATTTA	24657928	True	NA	NA	False	AATAAA	-17	NA	24667076	24705046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24667345_24697882_24698068_24701458
transcript_119770.known	chr6	+	733	3	FSM	ENSG00000112304.11	ENST00000476436.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	2	99	junction_1	682	1862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTAGAAATATTCTTGG	NA	False	NA	24	True	AATAAA	-16	NA	24687401	24701714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24687694_24697882_24698068_24701458
transcript_119779.known	chr6	+	1263	7	FSM	ENSG00000112312.10	ENST00000230056.8	1263	7	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	216.53021344222	6871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGTTTCTATGCTTT	24757618	True	NA	35	True	AATATA	-19	NA	24774936	24786099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24775245_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_119790.known	chr6	+	1039	7	FSM	ENSG00000112312.10	ENST00000620958.4	1039	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	454.708850682378	2240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAATTTGTCTGTTTCTA	24758094	False	NA	29	True	AATATA	-13	NA	24775412	24786093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24775503_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_1198.known	chr1	-	2641	19	FSM	ENSG00000157881.16	ENST00000378466.9	2641	19	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_4	25.7336787541584	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGGAGCCATCTGCGATGT	NA	False	NA	-5	True	AATAGA	-14	NA	2526596	2508536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_2509061_2509861_2509931_2510056_2510158_2510677_2510783_2511337_2511388_2511627_2511684_2512887_2513040_2514001_2514090_2514353_2514467_2515561_2515718_2518163_2518265_2518515_2518598_2519142_2519325_2519800_2519955_2520321_2520415_2520722_2520907_2521100_2521316_2521717_2521801_2526463
transcript_119802.known	chr6	+	1133	7	FSM	ENSG00000112312.10	ENST00000356509.7	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_1	232.733514752149	8389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGTCTGTTTCTATG	24757612	True	NA	31	True	AATATA	-15	NA	24774930	24786095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24775113_24777221_24777298_24780662_24780741_24781476_24781622_24784086_24784170_24784443_24784555_24785637
transcript_119804.known	chr6	-	2704	14	FSM	ENSG00000111913.20	ENST00000645100.1	2704	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.69963093301422	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACCTTGTCTCAAAAAAAAA	-24935028	True	NA	NA	False	NA	NA	NA	24935948	24839978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_24840776_24842861_24843555_24848024_24848155_24849801_24849951_24850596_24850723_24852574_24852619_24860972_24861037_24865300_24865451_24869093_24869148_24870865_24870890_24872880_24872960_24873643_24873800_24875690_24875818_24935837
transcript_119805.known	chr6	+	499	2	FSM	ENSG00000214975.4	ENST00000414949.2	499	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTGTGTTTTATCTT	NA	False	NA	NA	False	NA	NA	NA	24976418	24976982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_24976489_24976553
transcript_119806.nnic	chr6	+	710	5	NNC	ENSG00000286633.1	novel	758	4	NA	NA	-32342	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTATTCCTTCCAAAGTA	NA	False	NA	NA	False	AATAAA	-15	NA	24980642	25015696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_24980822_25013290_25013345_25014184_25014298_25015224_25015319_25015426
transcript_119813.nnic	chr6	-	621	3	Antisense	novelGene_ENSG00000079691.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATCCTGATTGGCTCCT	-25279976	True	NA	NA	False	AATAAA	-20	NA	25280032	25277500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_25277783_25278608_25278802_25279886
transcript_119815.nnic	chr6	-	868	2	Antisense	novelGene_ENSG00000079691.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATATGGTGTCGTGTTTCA	-25279976	True	NA	NA	False	NA	NA	NA	25280032	25278079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_25278802_25279886
transcript_119817.known	chr6	+	9418	8	FSM	ENSG00000112343.11	ENST00000357085.5	9418	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.19522860933439	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACGTTTTCACCTTTCTG	25962512	True	NA	NA	False	ATTAAA	-23	NA	25962801	25991231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_25962856_25963048_25963283_25966334_25966934_25969324_25969421_25971868_25972100_25973053_25973077_25973172_25973286_25983163
transcript_119819.known	chr6	-	756	1	FSM	ENSG00000124610.5	ENST00000244573.5	756	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	89	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCATTTCAGGAAAAGAGCT	-25956993	False	60794	NA	False	NA	NA	NA	26017787	26017031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26017000_26017800
transcript_11982.nnic	chr1	-	1105	4	NIC	ENSG00000162729.14	novel	2270	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	237.689339731975	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCTTGGCTGTGTCTTC	-160098685	False	NA	NA	False	AATAAA	-16	NA	160098702	160091342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_160091609_160091807_160091939_160092281_160092696_160098408
transcript_119820.known	chr6	+	508	1	FSM	ENSG00000275714.2	ENST00000613854.2	508	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAAGTAGCTGTAAGAA	25940065	True	NA	NA	False	NA	NA	NA	26020450	26020958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26020400_26021000
transcript_119821.nnic	chr6	-	713	2	Genic_Genomic	ENSG00000286522.2	novel	511	1	NA	NA	-1	2739	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTTTGATGGTCTCTTC	-25972232	True	NA	0	True	AATAAA	-22	NA	26032100	26028849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_26029220_26031757
transcript_119822.known	chr6	-	511	1	FSM	ENSG00000286522.2	ENST00000621411.3	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAACGAAAGTAGCTGT	-25972231	True	NA	NA	False	NA	NA	NA	26032099	26031588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26031600_26032100
transcript_119823.known	chr6	-	527	1	FSM	ENSG00000278463.2	ENST00000615868.2	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTCCATTAAATGAGCTG	-25993723	True	NA	NA	False	NA	NA	NA	26033618	26033091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26033100_26033600
transcript_119824.known	chr6	-	487	1	FSM	ENSG00000276410.4	ENST00000615966.2	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTCACAAGGAGAGCTA	-26040381	False	NA	NA	False	NA	NA	NA	26043713	26043226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26043200_26043700
transcript_119825.known	chr6	+	486	1	FSM	ENSG00000287080.2	ENST00000612966.3	486	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTTCACTTAAAAACAGT	26022887	True	NA	NA	False	NA	NA	NA	26045383	26045869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26045400_26045900
transcript_119826.known	chr6	-	731	1	FSM	ENSG00000187837.4	ENST00000343677.4	731	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	414	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATCTCAATAAAAGAGCT	-25992203	True	NA	1	True	NA	NA	NA	26056470	26055739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26055700_26056500
transcript_119828.known	chr6	+	5176	6	FSM	ENSG00000010704.19	ENST00000357618.10	5176	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.979795897113271	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCAAAAACTTTTTTT	26087353	True	NA	7	True	ATTAAA	-19	NA	26087428	26098343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26087517_26090840_26091105_26091313_26091590_26092684_26092961_26093118_26093233_26094185
transcript_119831.known	chr6	+	405	1	FSM	ENSG00000197061.5	ENST00000377803.4	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCGTTTAAAGAGCTG	25998487	True	NA	25	True	AAAACA	-40	NA	26103932	26104337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26103900_26104300
transcript_119832.known	chr6	-	659	2	FSM	ENSG00000180596.8	ENST00000314332.5	659	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTCTTTTTATATGTATA	-25979544	True	NA	NA	False	ATTAAA	-18	NA	26123910	26114872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26115136_26123514
transcript_119834.nnic	chr6	+	964	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-1	-710	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTGGTCACTTTTCTT	26049674	True	NA	19	True	AGTAAA	-35	NA	26124170	26138374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_119835.nnic	chr6	+	1547	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-1	-127	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGAACTATGTGTA	26049674	True	NA	9	True	AATAAA	-18	NA	26124170	26138957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_119836.nnic	chr6	+	1706	3	NNC	ENSG00000180573.10	novel	1668	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	17	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	26049674	True	NA	15	True	AATAAA	-24	NA	26124170	26139116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26124750_26127697_26127762_26138053
transcript_119838.nnic	chr6	+	1430	3	NNC	ENSG00000180573.10	novel	1462	2	NA	NA	0	-127	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	29	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGAACTATGTGTA	26049675	True	NA	9	True	AATAAA	-18	NA	26124171	26138957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26124634_26127697_26127762_26138053
transcript_119839.known	chr6	+	1668	2	FSM	ENSG00000180573.10	ENST00000314088.6	1668	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTCATTAATTTTCT	NA	False	NA	15	True	AATAAA	-24	NA	26124144	26139116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26124750_26138053
transcript_11984.known	chr1	-	2191	8	FSM	ENSG00000162729.14	ENST00000614243.4	2191	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	163.190010698684	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAAAGCAGGCTTGGCTG	-160098811	True	NA	NA	False	AATAAA	-9	NA	160098828	160091349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160091609_160091807_160091939_160092281_160092696_160092923_160093332_160093709_160094172_160094868_160095247_160098408_160098518_160098798
transcript_119842.known	chr6	+	1462	2	FSM	ENSG00000180573.10	ENST00000602637.1	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAATAAAAGGTAATGCAA	26049706	True	NA	-17	True	AATAGA	-32	NA	26124202	26139084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26124634_26138053
transcript_119845.known	chr6	+	519	1	FSM	ENSG00000180573.10	ENST00000377791.4	519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTTCAAAGGAAGAGCTA	26049675	True	NA	NA	False	NA	NA	NA	26124171	26124690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26124200_26124700
transcript_119846.known	chr6	+	787	1	FSM	ENSG00000168298.7	ENST00000304218.6	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGCTCTCAGTAAAAGAGCT	26123069	True	NA	12	True	NA	NA	NA	26156328	26157115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26156300_26157100
transcript_119849.known	chr6	+	789	2	FSM	ENSG00000158373.9	ENST00000289316.2	789	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCCTTCATTGTTGATC	26132278	False	NA	5	True	AATAAA	-20	NA	26158145	26171349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26158560_26170974
transcript_11985.known	chr1	+	5435	23	FSM	ENSG00000018625.15	ENST00000361216.8	5435	23	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_7	7.79078179592623	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTCTTCCATAATTCA	160113128	True	NA	NA	False	AATAAA	-26	NA	160115758	160143591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160115874_160120905_160121011_160121191_160121252_160123212_160123417_160123942_160124057_160124295_160124431_160125135_160125254_160127551_160127821_160128651_160128851_160128979_160129090_160129265_160129401_160130101_160130292_160130421_160130598_160134483_160134621_160135144_160135296_160135433_160135603_160135838_160135994_160136246_160136371_160136569_160136716_160136900_160137032_160139639_160139742_160139892_160139985_160141293
transcript_119850.known	chr6	+	496	1	FSM	ENSG00000158373.9	ENST00000377777.6	486	1	24	-34	0	34	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGGGGGTTATTGGACT	26132278	False	NA	16	True	AATAAA	-22	NA	26158145	26158641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26158100_26158600
transcript_119851.known	chr6	-	403	1	FSM	ENSG00000277157.2	ENST00000614247.2	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTCAGGAGAAAGAGTA	-26102104	True	NA	NA	False	NA	NA	NA	26189112	26188709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26188700_26189100
transcript_119852.known	chr6	-	1637	3	FSM	ENSG00000282988.2	ENST00000635641.1	1637	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTCACGGCATGTACAGT	-26170692	True	NA	NA	False	NA	NA	NA	26199293	26195594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26196247_26196719_26197270_26198858
transcript_119853.known	chr6	-	948	2	FSM	ENSG00000282988.2	ENST00000635200.1	948	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCGTAAACTGGAACC	-26170692	True	NA	0	True	TATAAA	-18	NA	26199293	26196753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26197267_26198858
transcript_119854.known	chr6	-	503	1	FSM	ENSG00000197409.8	ENST00000356476.3	503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTCTATAAAAGTTGCT	-26148107	True	NA	-30	True	NA	NA	NA	26197286	26196783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26196800_26197300
transcript_119855.known	chr6	+	1487	1	FSM	ENSG00000276966.3	ENST00000615164.3	412	1	-58	-1017	-58	1017	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATCTCATTGTCTATT	26204503	False	NA	7	True	AATAAA	-18	NA	26204551	26206038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26204600_26206000
transcript_119856.known	chr6	-	1534	1	FSM	ENSG00000273802.3	ENST00000541790.4	489	1	-4	-1041	-4	1041	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTACAGTTTTGGCTGGCTG	-26202788	False	NA	NA	False	CATAAA	-28	NA	26216692	26215158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26215200_26216700
transcript_119857.known	chr6	+	509	1	FSM	ENSG00000277075.2	ENST00000303910.4	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTCACTGTCCTAATTT	26145179	False	NA	9	True	AATACA	-21	NA	26216974	26217483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26217000_26217500
transcript_119860.known	chr6	+	482	1	FSM	ENSG00000274750.3	ENST00000614911.3	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTCCGTGAAAAGGGCT	26218649	True	NA	NA	False	NA	NA	NA	26225134	26225616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26225100_26225600
transcript_119861.known	chr6	-	776	1	FSM	ENSG00000124575.7	ENST00000244534.7	776	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTCTCAGTCAAAAGAGC	-26141125	True	NA	2	True	TTTAAA	-23	NA	26234987	26234211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26234200_26235000
transcript_119862.known	chr6	+	401	1	FSM	ENSG00000274618.2	ENST00000244537.6	401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCTTCGTCACACGAAG	26046188	True	NA	NA	False	CATAAA	-18	NA	26240392	26240793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26240400_26240800
transcript_119863.known	chr6	-	494	1	FSM	ENSG00000277775.2	ENST00000618052.2	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	90	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATTTCAGTTGAAAGCG	-26215424	True	NA	-2	True	NA	NA	NA	26250635	26250141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26250100_26250600
transcript_119864.known	chr6	+	2060	1	FSM	ENSG00000275713.3	ENST00000619466.3	462	1	37	-1635	37	1635	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTGTGAGTTAGTATT	26251587	False	NA	1	True	AATAAA	-17	NA	26251650	26253710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26251600_26253700
transcript_119865.known	chr6	-	2411	1	FSM	ENSG00000273983.2	ENST00000614378.2	496	1	-402	-1513	-402	1513	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCTTCAATAACAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	26271815	26269404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26269400_26271800
transcript_119866.known	chr6	+	482	1	FSM	ENSG00000278588.2	ENST00000377733.4	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTCATTTAAAGATCTG	26222086	True	NA	NA	False	NA	NA	NA	26272930	26273412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26272900_26273400
transcript_119868.known	chr6	-	1034	2	FSM	ENSG00000158406.6	ENST00000634560.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAACCCTCCAATGGCTCT	-26169771	True	NA	-8	True	AATAAA	-31	NA	26285534	26281054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26281588_26285033
transcript_119869.known	chr6	-	409	1	FSM	ENSG00000158406.6	ENST00000377727.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTTTCATAAAAGAGCAG	-26169771	True	NA	NA	False	NA	NA	NA	26285534	26285125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26285100_26285500
transcript_119873.known	chr6	+	3733	10	FSM	ENSG00000186470.14	ENST00000508906.6	3733	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_6	2.34652356466032	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTTTTCTAGACTGT	NA	False	NA	15	True	AATAAA	-26	NA	26365158	26378320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26365353_26367989_26368051_26368564_26368913_26370321_26370604_26372896_26373098_26373275_26373297_26373386_26373414_26374326_26374374_26374770_26374799_26375796
transcript_119875.known	chr6	+	3583	8	FSM	ENSG00000124508.17	ENST00000356709.9	3583	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	9.72058619211657	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381847	True	NA	6	True	AATAAA	-16	NA	26383107	26394874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383182_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_119878.known	chr6	+	2733	8	FSM	ENSG00000124508.17	ENST00000416795.6	2733	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.0038260731486	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTTAACTTTTTCCAG	26381947	True	NA	12	True	AATAAA	-17	NA	26383207	26393992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383314_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_119880.known	chr6	+	1790	8	FSM	ENSG00000124508.17	ENST00000469230.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	18.7834056158784	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381835	True	NA	6	True	AATAAA	-16	NA	26383095	26394874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383300_26383791_26383916_26385014_26385363_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26394297
transcript_119882.known	chr6	+	3241	7	FSM	ENSG00000124508.17	ENST00000352867.6	3241	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	15.3451041776269	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGCTTGAATGGTAGTA	26381841	True	NA	6	True	AATAAA	-16	NA	26383101	26394874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26383182_26383791_26383916_26388012_26388295_26390004_26390212_26390686_26390708_26390802_26390830_26392374
transcript_119896.nic	chr6	+	594	2	ISM	ENSG00000124549.15	ENST00000465856.5	2483	7	6	8134	4	-5577	5prime_fragment	FALSE	canonical	2	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTACTATATTTTGTT	26421275	True	NA	NA	False	AATAAA	-1	NA	26421396	26422454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_26421625_26422088
transcript_119897.known	chr6	+	3113	8	FSM	ENSG00000112763.17	ENST00000429381.5	3113	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	13.5586405916625	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457212	True	NA	9	True	AATAAA	-18	NA	26457960	26469637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467718
transcript_119898.known	chr6	+	2890	8	FSM	ENSG00000112763.17	ENST00000312541.10	2890	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	7.32343178170074	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTGATTAACTTTTTCCA	26457206	True	NA	9	True	AATAAA	-18	NA	26457954	26469637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26467947
transcript_119899.known	chr6	+	1687	8	FSM	ENSG00000112763.17	ENST00000469185.5	1687	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	14.8406501865378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTTTGACTCTTTTTG	26457219	True	NA	9	True	AATAAA	-17	NA	26457967	26476621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26458143_26458606_26458719_26459480_26459829_26463243_26463526_26465184_26465407_26465952_26465974_26466061_26466089_26476121
transcript_11990.nnic	chr1	+	407	4	NNC	ENSG00000018625.15	novel	3114	20	NA	NA	-1	1159	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	13.4412301024373	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACGGTCCCTGCTTTAA	160113127	True	NA	NA	False	ATTAAA	-29	NA	160115757	160122434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_160115874_160120905_160121011_160121191_160121252_160122308
transcript_119902.nnic	chr6	+	522	2	NNC	ENSG00000112763.17	novel	687	4	NA	NA	9107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	7	True	AATAAA	-15	NA	26474333	26476619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26474397_26476160
transcript_11991.nic	chr1	+	1461	3	ISM	ENSG00000018625.15	ENST00000472488.5	3114	20	-1	14771	-1	1156	5prime_fragment	FALSE	canonical	3	28	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAACGGTCCCTGCTT	160113127	True	NA	NA	False	ATTAAA	-26	NA	160115757	160122431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160115874_160120905_160121011_160121191
transcript_119911.nnic	chr6	+	2089	3	NNC	ENSG00000182952.5	novel	1943	2	NA	NA	-16	4	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_2	9.5	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTCTTGTTAATATTTC	26533221	True	NA	NA	False	AATAAA	-22	NA	26538349	26546937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_26538502_26539900_26540027_26545126
transcript_119913.known	chr6	+	1943	2	FSM	ENSG00000182952.5	ENST00000377575.3	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTCTTCTTGTTAATA	26533237	True	NA	NA	False	AATAAA	-18	NA	26538365	26546933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26538502_26545126
transcript_119915.known	chr6	+	2943	3	FSM	ENSG00000146109.5	ENST00000274849.3	2943	3	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	15.5	960	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATTTGCCTCTTAATAT	26589958	True	NA	11	True	ATTAAA	-20	NA	26596952	26600739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_26597224_26597913_26598111_26598264
transcript_119916.known	chr6	-	572	5	FSM	ENSG00000181315.11	ENST00000461899.1	572	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.2374485338209	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTTCTTATCAAGAAAA	-26657785	True	NA	NA	False	NA	NA	NA	26659689	26638639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26658776_26658852_26659440
transcript_119917.known	chr6	-	4811	4	FSM	ENSG00000181315.11	ENST00000415922.7	4811	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.0855260988773	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCGTCTCCACTGTACTG	-26657842	True	NA	0	True	AATAAA	-22	NA	26659746	26634382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26643658_26643729_26658557_26658647_26659440
transcript_119920.known	chr6	-	587	3	FSM	ENSG00000181315.11	ENST00000480036.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	62	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATTTTTATTCATATGCA	-26657781	True	NA	NA	False	AATATA	-26	NA	26659685	26638475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26658557_26658647_26659440
transcript_119922.known	chr6	-	467	3	FSM	ENSG00000181315.11	ENST00000465674.5	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	68	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAAATGACTGTGAGGGC	-26657831	True	NA	NA	False	NA	NA	NA	26659735	26638626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_26638729_26643658_26643729_26659440
transcript_119926.nnic	chr6	-	813	4	Antisense	novelGene_ENSG00000261584.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	2.94392028877595	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGATTGTGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	26687273	26673035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_26673247_26673884_26674072_26683010_26683131_26686978
transcript_119928.nnic	chr6	-	626	3	Antisense	novelGene_ENSG00000261584.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	4.5	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGATTGTGTGTGTAT	NA	False	NA	NA	False	ATTAAA	-14	NA	26687273	26673035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_26673247_26683010_26683131_26686978
transcript_11993.nic	chr1	+	1489	9	ISM	ENSG00000143318.13	ENST00000368078.8	1878	11	3020	0	957	0	3prime_fragment	FALSE	canonical	2	2	junction_4	1.93245310421754	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTATTTTGGTGAAGT	160193566	True	NA	NA	False	AATAAA	-21	NA	160193594	160201886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160193848_160195011_160195124_160195460_160195535_160195896_160196028_160197568_160197615_160198676_160198732_160198952_160199054_160199850_160199926_160201244
transcript_119948.known	chr6	+	495	4	FSM	ENSG00000224843.8	ENST00000424968.6	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.78423336480244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGAGCTTTGAAGATAGT	27020273	False	NA	NA	False	AATAAA	-18	NA	27020324	27023925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020415_27020555_27020656_27023253_27023398_27023764
transcript_119950.known	chr6	+	1062	3	FSM	ENSG00000224843.8	ENST00000666341.1	1062	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGATAGTTTGTTA	27019886	False	NA	NA	False	AATAAA	-24	NA	27019904	27023931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020656_27023253_27023398_27023764
transcript_119951.known	chr6	+	684	4	FSM	ENSG00000224843.8	ENST00000661007.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.12825877028341	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTGAGCTTTGAAGATA	27020302	True	NA	NA	False	AATAAA	-16	NA	27020350	27023923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020607_27020702_27020768_27023208_27023398_27023749
transcript_119952.known	chr6	+	985	4	FSM	ENSG00000224843.8	ENST00000668297.1	985	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.49691252107735	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTTATGCAATAATTGT	27019880	False	NA	NA	False	AATAAA	-36	NA	27019898	27023943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020055_27020164_27020656_27023253_27023398_27023749
transcript_119953.known	chr6	+	1418	2	FSM	ENSG00000224843.8	ENST00000664092.1	1418	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTTTGTTGAACTGT	27019907	False	NA	NA	False	NA	NA	NA	27019958	27023974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020656_27023253
transcript_119954.known	chr6	+	999	3	FSM	ENSG00000224843.8	ENST00000652085.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAAGATAGTTTGTTA	27020302	True	NA	NA	False	AATAAA	-24	NA	27020350	27023931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27020607_27020702_27020768_27023253
transcript_119957.nnic	chr6	-	979	3	NNC	ENSG00000124635.9	novel	950	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTTGCCAACTGGAA	-27112965	False	NA	-12	True	AATAAA	-24	NA	27132799	27125896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_27126463_27127263_27127402_27132524
transcript_119959.nnic	chr6	-	797	3	NNC	ENSG00000124635.9	novel	408	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	6	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112965	False	NA	-14	True	TATAAA	-15	NA	27132799	27126078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_27126463_27127263_27127402_27132524
transcript_11996.known	chr1	+	2694	6	FSM	ENSG00000162734.13	ENST00000368076.1	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	223.506062557596	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATTTTAAAATTTCTGTG	160193473	True	NA	33	True	AATAAA	-25	NA	160205420	160215376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160205523_160207132_160207238_160208463_160208666_160211542_160211717_160213109_160213266_160213421
transcript_119960.known	chr6	-	950	2	FSM	ENSG00000124635.9	ENST00000607124.1	950	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGTTGCCAACTGGAA	-27112916	True	NA	-12	True	AATAAA	-24	NA	27132750	27125896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27126463_27132366
transcript_119961.known	chr6	-	408	2	FSM	ENSG00000124635.9	ENST00000606923.1	408	2	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCCTTATTCATTGGC	-27112714	False	NA	-14	True	TATAAA	-15	NA	27132548	27126078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27126463_27132524
transcript_119964.known	chr6	-	480	1	FSM	ENSG00000124635.9	ENST00000339812.3	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTCAAAGAAAGAGCTG	-27112961	True	NA	NA	False	NA	NA	NA	27132795	27132315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27132300_27132800
transcript_119966.nnic	chr6	-	651	2	Antisense	novelGene_ENSG00000276180.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	-27146047	False	NA	-26	True	AATAAA	-21	NA	27146075	27138292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_27138682_27145813
transcript_119968.nnic	chr6	-	839	2	Genic_Genomic	ENSG00000197903.8	novel	495	1	NA	NA	-3	8068	multi-exon	FALSE	canonical	3	121	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCTTGTCAGTTGATTT	-27117235	True	NA	-26	True	AATAAA	-21	NA	27146858	27138292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_27138682_27146408
transcript_119969.known	chr6	-	495	1	FSM	ENSG00000197903.8	ENST00000356950.2	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATCGATATTAGAGCTG	-27117232	True	NA	-2	True	NA	NA	NA	27146855	27146360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27146400_27146900
transcript_119970.known	chr6	+	457	1	FSM	ENSG00000274997.2	ENST00000377459.3	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTACACTGTCTTAGAGAA	27089800	True	NA	NA	False	AAAACA	-20	NA	27147105	27147562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27147100_27147600
transcript_119973.nic	chr6	+	2052	6	ISM	ENSG00000112812.16	ENST00000230582.8	2887	12	3478	167	-15	0	3prime_fragment	FALSE	canonical	3	33	junction_1	26.7850704684531	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTCTTTGTATGCACA	27250534	True	NA	19	True	AATAAA	-16	NA	27251178	27256453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_119974.known	chr6	+	955	5	FSM	ENSG00000112812.16	ENST00000488649.5	955	5	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	20.5836707124847	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTTTCTTTTTCTGGACT	27250549	True	NA	NA	False	GGGGCT	-7	NA	27251193	27255662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_119976.known	chr6	+	910	5	FSM	ENSG00000112812.16	ENST00000481125.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	28.8303225788405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGTGGATGATTATTCT	27250557	True	NA	-9	True	NA	NA	NA	27251201	27255514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27251749_27252041_27252807_27252950_27254985_27255132_27255246
transcript_119980.known	chr6	+	996	5	FSM	ENSG00000112812.16	ENST00000484493.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.7979827504061	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGTGACTTATGCTGG	27250654	False	NA	48	True	NA	NA	NA	27251298	27255571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251502_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_119983.known	chr6	+	962	5	FSM	ENSG00000112812.16	ENST00000468138.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4403241579972	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACCCTTTCCACTCCCTG	27251346	True	NA	NA	False	NA	NA	NA	27251619	27255319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27252041_27252807_27252950_27254692_27254873_27254985_27255132_27255246
transcript_119985.known	chr6	+	1002	4	FSM	ENSG00000112812.16	ENST00000492575.5	1002	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	31.3723161756065	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTGCTCTGCCATG	27250568	True	NA	NA	False	NA	NA	NA	27251212	27255908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27252807_27252950_27254985_27255132_27255246
transcript_119991.known	chr6	+	840	4	FSM	ENSG00000112812.16	ENST00000471463.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	40.4062701404951	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGCAGCTTGTTTTGAA	27251388	False	NA	NA	False	NA	NA	NA	27251661	27255381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27252041_27254692_27254873_27254985_27255132_27255246
transcript_119993.known	chr6	+	914	3	FSM	ENSG00000112812.16	ENST00000495683.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	45.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTCTGTCTATTTCTC	NA	False	NA	NA	False	NA	NA	NA	27251070	27255820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27251265_27254985_27255132_27255246
transcript_119995.known	chr6	+	1809	3	FSM	ENSG00000112812.16	ENST00000377456.6	1809	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	46	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTTGTATGCACAGAG	27251314	True	NA	22	True	AATAAA	-19	NA	27251587	27256456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27252041_27254985_27255132_27255246
transcript_119999.nnic	chr6	-	2782	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	10	1372	-3	8	multi-exon	FALSE	canonical	3	60	junction_4	21.4650879336657	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGTGTCATGTAGCTGTT	-27375249	False	NA	-9	True	AATAAA	-14	NA	27375267	27357822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_12.known	ERCC-00031	+	1122	1	FSM	ERCC-00031A	DQ459431	1122	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00031_+_0_1100
transcript_120002.nnic	chr6	-	776	5	FSM	ENSG00000204789.5	ENST00000692173.1	4164	5	10	3378	-3	-1577	multi-exon	FALSE	canonical	3	60	junction_4	21.4650879336657	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGTAAATATAGTGAATG	-27375249	False	NA	NA	False	AAGAAA	-21	NA	27375267	27359828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27360222_27363178_27363303_27367516_27367613_27370135_27370225_27375193
transcript_120007.known	chr6	-	2397	1	FSM	ENSG00000204789.5	ENST00000416749.2	1603	1	-367	-427	-367	6	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACGTGTCATGTAGCTG	NA	False	NA	-11	True	AATAAA	-12	NA	27360221	27357824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27357800_27360200
transcript_120009.known	chr6	+	749	4	FSM	ENSG00000124613.9	ENST00000461521.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	12.675435561221	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGCCTTTTGAATGCAA	27388649	True	NA	NA	False	NA	NA	NA	27388991	27400769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27389076_27395016_27395096_27399441_27399551_27400292
transcript_12001.known	chr1	+	1021	4	FSM	ENSG00000162734.13	ENST00000368077.5	1021	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	203.529413653708	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTCATGGGCCTAGCAT	160193432	True	NA	NA	False	NA	NA	NA	160205379	160214035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160205523_160211542_160211651_160213109_160213266_160213421
transcript_120011.known	chr6	+	4042	3	FSM	ENSG00000124613.9	ENST00000244576.9	4042	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	17	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCCTATAGCTTTTTA	27388439	True	NA	18	True	AATAAA	-29	NA	27388758	27403908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27389076_27399441_27399551_27400292
transcript_120014.known	chr6	+	325	2	FSM	ENSG00000124613.9	ENST00000482767.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGTCCATTGTCATT	27388844	False	NA	6	True	CATAAA	-21	NA	27388903	27391132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27389076_27390979
transcript_120015.nnic	chr6	+	722	2	NNC	ENSG00000124613.9	novel	325	2	NA	NA	8	-1229	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGTGGGTGTATTGAC	27388447	True	NA	NA	False	AATAAA	-15	NA	27388766	27389903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_27389076_27389490
transcript_120016.known	chr6	-	3328	6	FSM	ENSG00000096654.16	ENST00000683788.1	3328	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	8.89044430835715	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGTCTGTTTTTAATAT	-27472725	False	NA	-4	True	ATTAAA	-18	NA	27473105	27450746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472728
transcript_120017.known	chr6	-	3101	6	FSM	ENSG00000096654.16	ENST00000211936.10	3101	6	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	16.1691063451262	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTGTTTTTAATATTCTA	NA	False	NA	0	True	ATTAAA	-22	NA	27473118	27450742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472972
transcript_120018.known	chr6	-	2899	6	FSM	ENSG00000096654.16	ENST00000377419.1	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	17.6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATTAACAATTCAA	-27472301	False	NA	-15	True	AATAAA	-16	NA	27472681	27450819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27453261_27456825_27456922_27457282_27457410_27467852_27467921_27472287_27472434_27472660
transcript_12003.known	chr1	+	2420	4	FSM	ENSG00000162734.13	ENST00000360472.9	2420	4	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_3	23.4426012966897	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACTGATTTTAAAATTTC	160193436	True	NA	29	True	AATAAA	-21	NA	160205383	160215372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160205523_160211542_160211717_160213109_160213266_160213421
transcript_120037.nic	chr6	+	896	5	FSM	ENSG00000281706.4	ENST00000689802.1	1302	5	-16	422	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.47722557505166	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACGGGTGGAATTGT	27693778	True	NA	NA	False	AATAAA	-22	NA	27694026	27713284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27694227_27702313_27702418_27710123_27710226_27710680_27710890_27713003
transcript_120041.known	chr6	+	728	4	FSM	ENSG00000281706.4	ENST00000662411.2	1496	4	414	354	356	63	multi-exon	FALSE	canonical	2	3	junction_2	5.35412613473634	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATGCAGGTGCCTCTTTT	27694192	False	NA	NA	False	NA	NA	NA	27694440	27713352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27694507_27702313_27702418_27710680_27710890_27713003
transcript_120043.nic	chr6	+	794	4	FSM	ENSG00000281706.4	ENST00000687781.1	1190	4	-26	422	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.37704215656966	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAGACGGGTGGAATTGT	27693778	True	NA	NA	False	AATAAA	-22	NA	27694026	27713284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27694227_27702313_27702418_27710680_27710890_27713003
transcript_12005.nic	chr1	+	631	2	ISM	ENSG00000162734.13	ENST00000368077.5	1021	4	-1	2006	-1	-1688	5prime_fragment	FALSE	canonical	3	462	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGGAGAACTCGAAGTG	160193431	True	NA	NA	False	AATAAA	-19	NA	160205378	160212029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160205523_160211542
transcript_120054.known	chr6	-	488	1	FSM	ENSG00000185130.6	ENST00000377401.4	451	1	-2	-35	-2	35	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGGGGCGAGGGGTC	-27807487	False	118428	NA	False	NA	NA	NA	27807931	27807443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27807400_27807900
transcript_120055.known	chr6	+	503	1	FSM	ENSG00000196747.5	ENST00000358739.5	495	1	26	-34	26	34	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAATTTCTCGTCTTTGCCT	27707015	False	NA	39	True	NA	NA	NA	27808198	27808701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27808200_27808700
transcript_120056.known	chr6	+	1237	1	FSM	ENSG00000278828.2	ENST00000369163.4	1250	1	13	0	13	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTTTTTCACCCTAGAA	27659601	False	NA	3	True	AATAAA	-18	NA	27810063	27811300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27810100_27811300
transcript_120057.known	chr6	-	476	1	FSM	ENSG00000276368.2	ENST00000333151.5	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATCATAAAAAGATGACA	-27696349	True	NA	1	True	CATAAA	-29	NA	27814777	27814301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27814300_27814800
transcript_120058.known	chr6	+	468	1	FSM	ENSG00000273703.2	ENST00000621112.2	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTTCTCAAGAAAGAGCCA	27706369	True	NA	NA	False	NA	NA	NA	27815021	27815489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27815000_27815500
transcript_120059.known	chr6	+	389	1	FSM	ENSG00000197238.5	ENST00000355057.3	389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3900	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTCAGCTGAAGAGTGG	27824074	False	NA	18	True	AATAAA	-24	NA	27824091	27824480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27824100_27824500
transcript_12006.known	chr1	-	3867	14	FSM	ENSG00000132716.19	ENST00000368074.6	3867	14	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_13	182.788881357508	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTCTGTGTGGTATG	-160250522	True	NA	-34	True	AGTAAA	-17	NA	160262549	160215719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262448
transcript_120060.known	chr6	-	387	1	FSM	ENSG00000273542.2	ENST00000611927.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	467	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCAGCTGAGGAGCCG	-27817602	False	NA	NA	False	NA	NA	NA	27831560	27831173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27831200_27831600
transcript_120061.known	chr6	+	715	3	FSM	ENSG00000233822.6	ENST00000449538.3	715	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCACTCTTTTTATTTTA	27820720	True	NA	NA	False	ATTAAA	-36	NA	27838544	27852204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27839066_27841563_27841662_27852108
transcript_120062.known	chr6	+	4137	3	FSM	ENSG00000233822.6	ENST00000606613.1	4137	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACTGGACAAATTCTCT	27820776	True	NA	NA	False	AATAAA	-15	NA	27838600	27855709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27839039_27841563_27841662_27852108
transcript_120066.known	chr6	-	496	1	FSM	ENSG00000275221.2	ENST00000618958.2	496	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCACCAAGTAGAGCT	-27824417	True	NA	NA	False	AAAAAG	-21	NA	27838375	27837879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27837900_27838400
transcript_120067.known	chr6	+	482	1	FSM	ENSG00000276903.2	ENST00000613174.2	482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGCGGGAGAGCTG	27749701	True	NA	NA	False	AATACA	-24	NA	27865316	27865798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27865300_27865800
transcript_120068.known	chr6	-	502	1	FSM	ENSG00000275379.2	ENST00000616365.2	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTCACCAAAAGGAAGCT	-27787575	True	NA	NA	False	NA	NA	NA	27872346	27871844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27871800_27872300
transcript_120069.known	chr6	-	387	1	FSM	ENSG00000275126.2	ENST00000618305.2	387	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTCTGTGAAAGAGCTG	-27789787	True	NA	NA	False	NA	NA	NA	27873534	27873147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27873100_27873500
transcript_120070.known	chr6	-	512	1	FSM	ENSG00000197153.5	ENST00000359303.4	512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTCACTGAGGATAGCT	-27890814	False	154151	NA	False	NA	NA	NA	27890826	27890314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27890300_27890800
transcript_120071.known	chr6	-	487	1	FSM	ENSG00000278677.2	ENST00000359611.4	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTTCTACGGAAGAACTG	-27739034	True	NA	25	True	TTTAAA	-44	NA	27893185	27892698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_27892700_27893200
transcript_120072.nnic	chr6	+	886	2	Genic_Genomic	ENSG00000124657.1_ENSG00000274641.2	novel	467	1	NA	NA	-3	142	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTCTGTTGCCTTAAT	27847446	True	NA	12	True	AATAAA	-23	NA	27893421	27958324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_+_27893982_27957998
transcript_120073.known	chr6	+	467	1	FSM	ENSG00000274641.2	ENST00000616182.2	467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCCAGAGAAAGAGCCTG	27847449	True	NA	NA	False	NA	NA	NA	27893424	27893891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_27893400_27893900
transcript_120085.nnic	chr6	-	620	3	NNC	ENSG00000269293.4	novel	2163	3	NA	NA	-9	-463	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	26	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTGGACTCTCTT	-28136824	False	NA	3	True	AATAAA	-22	NA	28136856	28122260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_28122641_28123083_28123212_28136744
transcript_120086.known	chr6	-	2163	3	FSM	ENSG00000269293.4	ENST00000600652.1	2163	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATGATTGTTTTTGTG	-28137261	True	NA	NA	False	AATAAA	-15	NA	28137293	28121794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28123212_28125622_28125820_28136744
transcript_120088.known	chr6	-	1536	2	FSM	ENSG00000269293.4	ENST00000602810.2	1983	2	447	0	-19	0	multi-exon	FALSE	canonical	3	61	junction_1	0	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGTATGATTGTTTTT	-28136834	False	NA	NA	False	AATAAA	-12	NA	28136866	28121797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28123212_28136744
transcript_120089.known	chr6	-	821	1	FSM	ENSG00000269293.4	ENST00000671586.1	821	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTTCTCCTGTATCAT	-28136516	True	NA	NA	False	AATAAA	-34	NA	28136844	28136023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28136000_28136800
transcript_12009.known	chr1	-	3972	14	FSM	ENSG00000132716.19	ENST00000326837.6	3972	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	185.811509761272	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250449	True	NA	-29	True	AGTAAA	-22	NA	160262476	160215714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262275
transcript_120090.known	chr6	+	1954	4	FSM	ENSG00000197279.5	ENST00000683778.1	1954	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	13.6707311029399	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	28080555	False	NA	19	True	AATAAA	-33	NA	28080567	28089563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28080971_28085480_28085892_28086171_28086311_28088562
transcript_120091.known	chr6	+	2514	4	FSM	ENSG00000197279.5	ENST00000377325.2	2514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	100.870654250326	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCAGTTTCTGGTGTTCAA	28080555	False	NA	19	True	AATAAA	-33	NA	28080567	28089563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28081531_28085480_28085892_28086171_28086311_28088562
transcript_120092.known	chr6	-	686	2	FSM	ENSG00000272009.1	ENST00000605945.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCCTTAAAGTGTGAAC	NA	False	NA	-7	True	ATTAAA	-25	NA	28081130	28078791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28078973_28080625
transcript_120094.nnic	chr6	+	1431	5	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-55	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	44.3360744766606	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	NA	False	NA	8	True	ATTAAA	-19	NA	28124553	28130082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28127315_28127355_28129371
transcript_120095.nnic	chr6	+	1370	5	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-55	-3	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	44.3360744766606	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	NA	False	NA	5	True	ATTAAA	-16	NA	28124553	28130079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28127315_28127355_28129429
transcript_120098.nnic	chr6	+	1389	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-55	-3	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_3	30.2691628926573	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	NA	False	NA	5	True	ATTAAA	-16	NA	28124553	28130079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125412_28125831_28126782_28126922_28129371
transcript_120099.known	chr6	+	1279	4	FSM	ENSG00000196812.6	ENST00000340487.5	1279	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	24.1430919496424	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	28123371	True	NA	8	True	ATTAAA	-19	NA	28124608	28130082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28124678_28125412_28125831_28126782_28126922_28129429
transcript_120100.nnic	chr6	+	1430	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	41.7079795189788	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATCTACCTGAGTAAAATA	28123325	True	NA	5	True	ATTAAA	-16	NA	28124562	28130079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129371
transcript_120101.nnic	chr6	+	1375	4	NNC	ENSG00000196812.6	novel	1279	4	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	40.2850951207626	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCTGAGTAAAATATCC	28123325	True	NA	8	True	ATTAAA	-19	NA	28124562	28130082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_28124678_28125362_28125831_28126782_28126922_28129429
transcript_120105.known	chr6	+	7419	6	FSM	ENSG00000198315.11	ENST00000330236.7	7419	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	5.49181208709839	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGATTATTTGTGGT	28138953	True	NA	24	True	AATAAA	-15	NA	28141882	28159460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28142030_28148315_28148825_28149482_28149625_28151844_28151937_28152260_28152385_28153055
transcript_120113.known	chr6	+	1628	5	FSM	ENSG00000226314.9	ENST00000440790.6	1628	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATATGTGTACTGTGGTT	28161706	True	NA	16	True	AATAAA	-36	NA	28161780	28169594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28161822_28162579_28162767_28164748_28164902_28166500_28167555_28169401
transcript_120114.known	chr6	+	1601	4	FSM	ENSG00000137185.13	ENST00000531979.5	1601	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	8.33999733546454	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGATTTGGTATCTGTG	28224556	True	NA	24	True	AATAAA	-25	NA	28225291	28233482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225331_28227011_28227505_28227689_28227838_28232561
transcript_120115.known	chr6	+	1659	4	FSM	ENSG00000137185.13	ENST00000252207.10	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	7.87400787401181	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTATCTGTGTTTAA	28224539	True	NA	29	True	AATAAA	-30	NA	28225274	28233487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225367_28227011_28227505_28227689_28227838_28232561
transcript_120118.known	chr6	+	2062	3	FSM	ENSG00000137185.13	ENST00000527436.5	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	9	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTAAAATTGCTTCTG	28224603	True	NA	43	True	AGTAAA	-37	NA	28225338	28229230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28225367_28227011_28227505_28227689
transcript_120120.nnic	chr6	+	1013	2	NIC	ENSG00000137185.13	novel	1659	4	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGGTATCTGTGTTTAA	28224508	True	NA	29	True	AATAAA	-30	NA	28225243	28233487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_28225331_28232561
transcript_120121.nnic	chr6	+	1019	2	NIC	ENSG00000137185.13	novel	1659	4	NA	NA	-1	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCCTGAAAGATTTGGTA	28224527	True	NA	18	True	AATAAA	-19	NA	28225262	28233476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_28225367_28232561
transcript_120125.known	chr6	-	5346	5	FSM	ENSG00000187626.9	ENST00000377294.3	5346	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	4.47213595499958	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGACAGTATTGGTCT	-28251784	True	NA	NA	False	AATAAA	-27	NA	28252269	28241696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251557
transcript_120127.nnic	chr6	-	2108	5	NNC	ENSG00000187626.9	novel	5346	5	NA	NA	0	-2929	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_4	10.770329614269	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATGTTGTCTATATTTC	-28251784	True	NA	5	True	AATAAA	-43	NA	28252269	28244625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_28245976_28246968_28247093_28248066_28248150_28249686_28249835_28251866
transcript_120132.known	chr6	+	1662	1	FSM	ENSG00000189134.4	ENST00000343684.4	1662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTGCCATTCATTTGC	28259262	True	NA	NA	False	ATTAAA	-29	NA	28259296	28260958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28259300_28261000
transcript_120133.known	chr6	+	3080	7	FSM	ENSG00000137338.6	ENST00000682144.1	3080	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9.70251971855192	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28281919_28283775_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_120134.known	chr6	+	3100	7	FSM	ENSG00000137338.6	ENST00000259883.3	3100	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	14.4501057281791	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTTGTGCACTTATTTA	28279826	True	NA	3	True	NA	NA	NA	28281571	28302549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28281919_28283755_28284210_28285550_28285708_28287079_28287169_28296815_28296946_28297894_28297992_28300723
transcript_120139.known	chr6	+	2362	4	FSM	ENSG00000197062.12	ENST00000316606.10	2362	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.94422221866655	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCCTGCAGATTTATTT	28267023	False	NA	11	True	AATAAA	-11	NA	28267057	28278201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267214_28271853_28271935_28272669_28272788_28276194
transcript_120141.known	chr6	+	1998	4	FSM	ENSG00000197062.12	ENST00000623276.3	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	23.5513623102076	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTACTCTCAAAGGTGT	28266229	True	NA	18	True	AATAAA	-19	NA	28267152	28277530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267214_28271853_28272337_28272669_28272788_28276194
transcript_120142.known	chr6	+	2685	4	FSM	ENSG00000197062.12	ENST00000421553.7	2685	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	20.8486610281492	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCTGCAGATTTATTTAAA	28266219	True	NA	14	True	AATAAA	-14	NA	28267142	28278204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267214_28271853_28272340_28272669_28272788_28276194
transcript_120144.known	chr6	+	2321	4	FSM	ENSG00000197062.12	ENST00000614088.1	2321	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	22.553639765383	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGTTTGTGGAAGATAA	28267318	True	NA	31	True	AATAAA	-31	NA	28267358	28278221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267454_28271853_28271935_28272669_28272788_28276194
transcript_120146.known	chr6	+	2729	4	FSM	ENSG00000197062.12	ENST00000619937.4	2729	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	24.3082062046727	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTGGAAGATAATTT	28267318	True	NA	34	True	AATAAA	-34	NA	28267358	28278224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28267454_28271853_28272340_28272669_28272788_28276194
transcript_120154.known	chr6	+	4687	6	FSM	ENSG00000189298.14	ENST00000252211.7	4687	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	10.9105453575887	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGGATTCTTAAATT	28349203	True	NA	7	True	AATAAA	-17	NA	28349946	28369172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28350068_28359524_28359989_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_120166.known	chr6	-	799	4	FSM	ENSG00000235109.8	ENST00000453745.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0213499897497	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACTTGTAAACGAGACAG	NA	False	NA	NA	False	NA	NA	NA	28336198	28326735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329715_28336081
transcript_120167.known	chr6	-	3050	4	FSM	ENSG00000235109.8	ENST00000439158.5	3050	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0213499897497	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335831	True	NA	3	True	AATAAA	-30	NA	28336134	28324736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28335829
transcript_120168.known	chr6	-	2812	4	FSM	ENSG00000235109.8	ENST00000344279.11	2812	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7.87400787401181	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGCTTTGAAGTTTAT	-28335845	True	NA	3	True	AATAAA	-30	NA	28336148	28324736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28329302_28329779_28336081
transcript_120169.known	chr6	-	2562	3	FSM	ENSG00000235109.8	ENST00000446474.5	2562	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	14	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCCCTAAACCTTTGGC	-28335831	True	NA	-9	True	AATAAA	-18	NA	28336134	28324748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28335829
transcript_120170.known	chr6	-	1005	3	FSM	ENSG00000235109.8	ENST00000435857.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	10	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTCCAGCATCTCCG	NA	False	NA	NA	False	NA	NA	NA	28336375	28326294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28326855_28327382_28327534_28336081
transcript_120173.nic	chr6	+	1615	2	ISM	ENSG00000189298.14	ENST00000252211.7	4687	6	-23	8177	-23	-5751	5prime_fragment	FALSE	canonical	3	21	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTTGCACCAGTTTCCA	28349180	True	NA	NA	False	AATAAA	-20	NA	28349923	28360995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_28350068_28359524
transcript_120174.known	chr6	+	1794	5	FSM	ENSG00000189298.14	ENST00000341464.9	1794	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.6659604392971	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGTGAGATTACCTTCAT	28349206	True	NA	7	True	AATAAA	-15	NA	28349949	28366746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28350068_28361323_28361472_28363302_28363386_28363691_28363816_28365425
transcript_120175.known	chr6	-	3909	6	FSM	ENSG00000158691.15	ENST00000396827.3	3909	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	11.160645142643	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAGTAACTTGCTTATTC	-28398675	True	NA	NA	False	AATAAA	-14	NA	28399731	28379218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28380872_28382190_28382610_28390595_28391743_28392901_28393047_28398003_28398474_28399656
transcript_120177.known	chr6	-	7711	4	FSM	ENSG00000158691.15	ENST00000684592.1	7711	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	4.49691252107735	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGAATATTTTTGTGTT	-28398691	True	NA	-6	True	TATAAA	-14	NA	28399747	28384737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28391743_28392901_28393047_28398003_28398474_28399656
transcript_120180.known	chr6	-	987	2	FSM	ENSG00000287804.2	ENST00000666335.1	987	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCTATATTGCTTTTAT	-28489128	True	NA	NA	False	TTTAAA	-15	NA	28489455	28476995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28477891_28489363
transcript_120182.nnic	chr6	-	1029	3	NNC	ENSG00000225173.2	novel	1390	2	NA	NA	10	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTGTGTTCTAATCA	NA	False	NA	-4	True	AATATA	-17	NA	28839048	28837243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_28837786_28838132_28838321_28838749
transcript_120183.known	chr6	-	709	2	FSM	ENSG00000225173.2	ENST00000457253.2	1390	2	52	629	52	-629	multi-exon	FALSE	canonical	3	17	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCACAGTGCTGGGATT	NA	False	NA	NA	False	NA	NA	NA	28839006	28837868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28838321_28838749
transcript_120185.known	chr6	+	413	2	FSM	ENSG00000224157.1	ENST00000444986.1	413	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTCTTAACTCTTGTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	28896529	28897322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28896731_28897110
transcript_120186.known	chr6	-	2963	8	FSM	ENSG00000204713.11	ENST00000377199.4	2963	8	0	0	0	0	multi-exon	TRUE	canonical	3	476	junction_5	28.6847751696019	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGCTTTCTGGG	NA	False	NA	-1	True	AATAAA	-18	NA	28923985	28903001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_28904666_28907235_28907263_28908807_28908841_28908972_28909089_28911695_28911719_28920011_28920243_28921891_28921988_28923212
transcript_120187.known	chr6	+	466	2	FSM	ENSG00000204709.4	ENST00000377186.3	466	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTAGAGCCGTTGGTT	NA	False	NA	NA	False	ATTAAA	-15	NA	28943876	28944537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28944027_28944221
transcript_120188.known	chr6	+	299	1	FSM	ENSG00000263426.2	ENST00000580476.2	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTTCCCTTTTCGGGAT	NA	False	NA	NA	False	NA	NA	NA	28977474	28977773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_28977500_28977800
transcript_120198.known	chr6	-	1252	4	FSM	ENSG00000204681.11	ENST00000467259.1	1252	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	21.9291789378647	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCTTTTCTGTACTTCCT	NA	False	NA	NA	False	NA	NA	NA	29633067	29629898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29630644_29631395_29631600_29632300_29632386_29632849
transcript_120200.known	chr6	-	894	2	FSM	ENSG00000213886.4	ENST00000377050.5	894	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTCTACTGATTTCTGTA	NA	False	NA	86	True	NA	NA	NA	29559732	29555514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29556351_29559674
transcript_120203.nic	chr6	+	1520	6	ISM	ENSG00000204655.12	ENST00000376889.3	1981	8	6801	7	-3997	0	3prime_fragment	FALSE	canonical	0	0	junction_1	1.2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTAACCCCTTGTCTTTT	NA	False	NA	NA	False	AATAAA	-42	NA	29666119	29672365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_29666266_29667642_29667664_29667903_29667925_29670280_29670398_29670700_29670722_29671171
transcript_120208.known	chr6	-	2082	5	FSM	ENSG00000204644.10	ENST00000376883.2	2082	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	8.38152730712011	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	NA	False	NA	-4	True	AATAAA	-17	NA	29681152	29672482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29676880_29677367_29681061
transcript_120210.known	chr6	-	1599	4	FSM	ENSG00000204644.10	ENST00000488757.6	1599	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	9.80929264637478	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTCTTTGTGTTTAGT	NA	False	NA	-4	True	AATAAA	-17	NA	29681155	29672482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29673759_29675385_29675488_29675932_29676060_29681061
transcript_120212.nnic	chr6	-	1680	4	Fusion	ENSG00000233916.1_ENSG00000214922.9	novel	1905	6	NA	NA	9	607	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTTAAAAGGATTCTCTT	-29748952	True	NA	NA	False	AATAAA	-23	NA	29749040	29707517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_29708775_29709578_29709733_29721020_29721149_29748899
transcript_120213.nnic	chr6	+	986	2	Antisense	novelGene_ENSG00000233916.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACTTGCTCTCAAAT	NA	False	NA	NA	False	AATAAA	-19	NA	29685978	29709226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_29686178_29708439
transcript_120215.known	chr6	+	1283	7	FSM	ENSG00000204642.14	ENST00000334668.8	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.91070819942883	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	NA	False	NA	15	True	AATAAA	-27	NA	29723339	29726525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29723528_29723657_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_120219.nic	chr6	+	1354	6	NIC	ENSG00000204642.14	novel	1283	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_4	2.78567765543682	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAGATATGTTTTTAT	29723232	True	NA	15	True	AATAAA	-27	NA	29723398	29726525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_29723928_29724172_29724449_29725030_29725307_29725446_29725564_29726010_29726044_29726402
transcript_12022.known	chr1	-	1237	9	FSM	ENSG00000162735.19	ENST00000532508.5	1237	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	314.516990797	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGAAGGAAGGCATCCCT	-160276285	True	NA	-88	True	NA	NA	NA	160285096	160279295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160281185_160281296_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_120231.nnic	chr6	-	953	3	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	-7	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACTCTTTCTCTTCACAC	NA	False	NA	0	True	ATTAAA	-19	NA	29749056	29726598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29727140_29745472_29745728_29748899
transcript_120237.nnic	chr6	-	945	3	NIC	ENSG00000273340.1	novel	1157	6	NA	NA	-87	408	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	1	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	NA	False	NA	NA	False	NA	NA	NA	29749056	29741322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29741856_29745472_29745728_29748899
transcript_120238.nnic	chr6	-	751	3	NIC	ENSG00000273340.1	novel	1157	6	NA	NA	-87	214	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	1	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGCGGTCATTGTATTA	NA	False	NA	NA	False	AATATA	-4	NA	29749056	29741516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29741856_29745472_29745728_29748899
transcript_120240.nnic	chr6	-	692	2	NIC	ENSG00000214922.9	novel	1905	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-2	True	ATTAAA	-17	NA	29749052	29726600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_29727140_29748899
transcript_120241.nnic	chr6	-	802	2	NNC	ENSG00000214922.9	novel	1905	6	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-2	True	ATTAAA	-17	NA	29749062	29726600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_29727240_29748899
transcript_120243.known	chr6	-	1905	6	FSM	ENSG00000214922.9	ENST00000399247.6	1905	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCACTCTTTCTCTTCAC	NA	False	NA	-2	True	ATTAAA	-17	NA	29749049	29726600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_29727140_29728364_29728496_29737965_29738437_29738550_29738887_29747147_29747426_29748899
transcript_120244.known	chr6	+	1319	7	FSM	ENSG00000204632.13	ENST00000360323.11	1319	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	2.21108319357027	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTTTTTCAAATTATTT	NA	False	NA	-92	True	ATTAAA	-20	NA	29827824	29831021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29827918_29828046_29828317_29828542_29828819_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_120246.known	chr6	+	1127	6	FSM	ENSG00000204632.13	ENST00000376818.7	1127	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.49857113690718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTACACGTGTTTCTTGTG	NA	False	NA	12	True	AATAAA	-23	NA	29827844	29831125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29827918_29828046_29828317_29829417_29829694_29829815_29829933_29830377_29830411_29830767
transcript_12025.known	chr1	-	3653	8	FSM	ENSG00000162735.19	ENST00000368072.10	3653	8	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_7	38.1928511314751	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCTGTGACTCTGGA	-160276322	True	NA	-7	True	AATACA	-20	NA	160285133	160276806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160283529_160283640_160285054
transcript_120267.nnic	chr6	+	961	6	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-92	496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4886016297013	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTTCAAATTCTTG	NA	False	NA	12	True	ATTAAA	-20	NA	29926366	29929728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928050_29928329_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_120268.nnic	chr6	+	1072	6	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-92	607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.4886016297013	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTATGCTGATTT	NA	False	NA	19	True	AATAAA	-30	NA	29926366	29929839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928050_29928329_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_120273.nnic	chr6	+	691	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-100	496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2528088114737	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTTCAAATTCTTG	NA	False	NA	12	True	ATTAAA	-20	NA	29926358	29929728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_120274.nnic	chr6	+	802	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-100	607	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.2528088114737	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTATGCTGATTT	NA	False	NA	19	True	AATAAA	-30	NA	29926358	29929839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29926531_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_120276.nnic	chr6	+	1271	5	NNC	ENSG00000230795.3	novel	1046	6	NA	NA	-14	607	intron_retention	TRUE	canonical	1	1	junction_1	21.834605560898	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTCTTATGCTGATTT	29926362	True	NA	19	True	AATAAA	-30	NA	29926444	29929839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_29927086_29928456_29928574_29929018_29929046_29929185_29929234_29929401
transcript_120298.known	chr6	+	1535	8	FSM	ENSG00000206503.13	ENST00000376809.10	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	121.297744649861	4884	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAGAGTCCACGTGTT	29942301	True	NA	13	True	AATAAA	-16	NA	29942531	29945870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29942627_29942756_29943027_29943267_29943544_29944121_29944398_29944499_29944617_29945058_29945092_29945233_29945282_29945450
transcript_120299.known	chr6	+	1786	7	FSM	ENSG00000206503.13	ENST00000496081.5	1786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	160.803883314082	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	29942317	False	NA	27	True	AATAAA	-30	NA	29942547	29945884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29942627_29942756_29942855_29943284_29943544_29944121_29944398_29944499_29945092_29945233_29945282_29945450
transcript_12030.known	chr1	-	3504	7	FSM	ENSG00000162735.19	ENST00000472750.5	3504	7	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	233.760383013604	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATGGGTGGCTTCATGA	-160276343	True	NA	-5	True	ATTAAA	-21	NA	160285154	160276866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160279635_160279800_160279846_160280069_160280247_160282038_160282201_160282416_160282503_160282943_160283110_160285054
transcript_120300.known	chr6	+	1766	7	FSM	ENSG00000206503.13	ENST00000495183.5	1766	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.803883314082	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTCTTGTGCTGATTT	29942321	False	NA	27	True	AATAAA	-30	NA	29942551	29945884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_29942627_29942756_29943544_29944121_29944398_29944499_29944617_29945062_29945092_29945233_29945282_29945450
transcript_120328.known	chr6	-	2296	4	FSM	ENSG00000204623.10	ENST00000448093.5	2296	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.84754619472471	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGTGAATCACTCCA	NA	False	NA	NA	False	AATAAA	-21	NA	30061143	30001010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30002733_30021666_30021762_30058114_30058191_30060740
transcript_120339.known	chr6	+	851	4	FSM	ENSG00000066379.15	ENST00000332435.10	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	13.1993265821489	2496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATGTATGTTACTTATAA	30059847	True	NA	36	True	ATTAAA	-26	NA	30061264	30064907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30061670_30061916_30062018_30062223_30062334_30064672
transcript_120340.known	chr6	+	754	5	FSM	ENSG00000066379.15	ENST00000376785.2	754	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	143.49455564585	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059845	True	NA	38	True	ATTAAA	-28	NA	30061262	30064909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30061414_30061514_30061670_30061916_30062018_30062223_30062334_30064672
transcript_120341.known	chr6	+	571	4	FSM	ENSG00000066379.15	ENST00000463141.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	148.460993754813	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTATGTTACTTATAATC	30059912	True	NA	38	True	ATTAAA	-28	NA	30061329	30064909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30061399_30061514_30061670_30062223_30062334_30064672
transcript_120345.nnic	chr6	+	1455	4	NNC	ENSG00000204619.8	novel	1689	4	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	187.677619573802	1551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067141	False	NA	15	True	AATAAA	-19	NA	30067154	30070333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_30067480_30068589_30068699_30069103_30069196_30069404
transcript_120348.known	chr6	+	1689	4	FSM	ENSG00000204619.8	ENST00000376769.6	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	168.291413922398	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067191	False	NA	15	True	AATAAA	-19	NA	30067204	30070333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30067480_30068278_30068354_30068589_30068699_30069103
transcript_120349.known	chr6	+	1464	4	FSM	ENSG00000204619.8	ENST00000376763.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	170.94313544438	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067521	False	NA	15	True	AATAAA	-19	NA	30067575	30070333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30067626_30068278_30068354_30068589_30068699_30069103
transcript_12035.known	chr1	-	738	4	FSM	ENSG00000132716.19	ENST00000497354.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	296.541546648845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGACGCGGACTCTGAT	-160220921	False	NA	NA	False	NA	NA	NA	160220934	160217683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160220458
transcript_120351.known	chr6	+	1621	3	FSM	ENSG00000204619.8	ENST00000376772.8	1621	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	33	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTAAATATGGGCCCAT	30067184	False	NA	15	True	AATAAA	-19	NA	30067197	30070333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30067480_30068589_30068699_30069103
transcript_120355.known	chr6	+	1881	7	FSM	ENSG00000204610.14	ENST00000376694.9	1881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATCTTGGGAAAAATC	NA	False	NA	NA	False	AATAAA	-21	NA	30163545	30172693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30164066_30167175_30167272_30168299_30168531_30169240_30169264_30170500_30170617_30170975_30171009_30171831
transcript_120359.known	chr6	-	3318	9	FSM	ENSG00000234127.9	ENST00000453195.5	3318	9	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_8	31.3446067928759	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGGAGATCTGTATTT	-30212030	True	NA	NA	False	AATAAA	-16	NA	30213427	30184454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30186559_30189166_30189200_30189417_30189534_30190012_30190036_30196515_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30213304
transcript_120361.known	chr6	-	1124	6	FSM	ENSG00000234127.9	ENST00000416596.5	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	15.8113883008419	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCAGAGCTCATGCAG	-30212022	True	NA	NA	False	NA	NA	NA	30213419	30196535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30196747_30198428_30198525_30198665_30199154_30201034_30201139_30204655_30204766_30213304
transcript_120373.known	chr6	+	3249	8	FSM	ENSG00000204599.15	ENST00000396551.8	3624	8	375	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	25.8449063390346	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGTTGTGTGGTAAT	NA	False	NA	23	True	NA	NA	NA	30326843	30343729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30326996_30328888_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711
transcript_120392.known	chr6	+	1013	5	FSM	ENSG00000204599.15	ENST00000428728.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	31.7529526186149	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGACCTTTGCCCCTGCATA	30326504	True	NA	NA	False	NA	NA	NA	30326904	30335977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30326996_30328908_30329042_30329310_30329771_30330780_30330877_30335744
transcript_120399.known	chr6	-	7267	5	FSM	ENSG00000231074.10	ENST00000664861.1	7267	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	132.816367590745	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	NA	False	NA	NA	False	AATACA	-39	NA	30326809	30286805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326150
transcript_120400.known	chr6	-	7199	5	FSM	ENSG00000231074.10	ENST00000653541.1	7199	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	124.340258967078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCTAGCCTGGTGAAGGA	NA	False	NA	NA	False	NA	NA	NA	30326866	30286727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30314268_30314483_30326353
transcript_120408.known	chr6	+	457	4	FSM	ENSG00000241370.6	ENST00000491477.5	457	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	544.923847890694	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTCCATTTTCTTCTG	30336933	True	NA	48	True	NA	NA	NA	30345152	30346884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345490_30345574_30346431_30346558_30346712
transcript_120412.known	chr6	-	6734	4	FSM	ENSG00000231074.10	ENST00000668974.1	6734	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	116.378692207809	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	NA	False	NA	NA	False	AATACA	-39	NA	30326490	30286805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326150
transcript_120413.known	chr6	-	7230	4	FSM	ENSG00000231074.10	ENST00000659132.1	7230	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	86.821656284593	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCCATCTCAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	30327086	30286702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30326353
transcript_120414.known	chr6	-	6537	4	FSM	ENSG00000231074.10	ENST00000658695.1	6537	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	135.647418782011	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTTGGGAGGCCAAGGC	NA	False	NA	NA	False	AATACA	-39	NA	30327363	30286805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30292600_30294470_30294965_30296131_30296238_30327220
transcript_120421.known	chr6	-	4605	4	FSM	ENSG00000231074.10	ENST00000444126.5	4605	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	126.24579200908	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTGGGGATTTTTTAAA	-30325902	False	NA	NA	False	NA	NA	NA	30326334	30291005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30294965_30296131_30296238_30314268_30314483_30326008
transcript_120427.known	chr6	-	5050	3	FSM	ENSG00000231074.10	ENST00000426882.6	5050	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	97.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTAGAAACAATGTTAAAA	NA	False	NA	-44	True	NA	NA	NA	30327150	30290817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30294965_30296131_30296238_30326353
transcript_120428.known	chr6	-	4518	3	FSM	ENSG00000231074.10	ENST00000449544.6	4518	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	129	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTATCCAAAGTTTGTCAC	-30325963	True	NA	-24	True	NA	NA	NA	30326395	30290797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30294965_30296131_30296238_30326150
transcript_12043.known	chr1	-	439	3	FSM	ENSG00000132716.19	ENST00000419626.1	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	138.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCCTCAGACCTGAGTT	-160250380	True	NA	NA	False	NA	NA	NA	160262407	160240297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160262116
transcript_120436.known	chr6	-	327	2	FSM	ENSG00000231074.10	ENST00000602498.1	327	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCTTAAGTCTGAATT	-30325705	False	NA	1	True	AATAAA	-18	NA	30326137	30304074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30304273_30326008
transcript_120439.known	chr6	+	1765	6	FSM	ENSG00000243753.6	ENST00000482052.6	1785	6	20	0	11	0	multi-exon	FALSE	canonical	0	0	junction_5	48.0141645767163	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGGGATTTCATAATGC	30259460	True	NA	NA	False	AATAAA	-16	NA	30259583	30293014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30260085_30260396_30260608_30261203_30261480_30261586_30261704_30262294_30262343_30292402
transcript_12044.known	chr1	-	728	3	FSM	ENSG00000132716.19	ENST00000447377.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	140.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGACCTGAAGGTGGTGGT	-160250487	True	NA	NA	False	NA	NA	NA	160262514	160239783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160262448
transcript_120440.known	chr6	+	1698	11	FSM	ENSG00000248167.7	ENST00000623385.3	1698	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	502.683240221912	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGATTCTGTTCTGTGGG	30328506	False	NA	18	True	AATAAA	-19	NA	30328906	30346854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30329042_30329310_30329771_30330780_30330877_30335744_30335976_30339907_30339931_30340504_30340621_30341711_30341897_30345297_30345399_30345490_30345574_30346431_30346558_30346712
transcript_120441.known	chr6	+	621	4	FSM	ENSG00000241370.6	ENST00000473266.1	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	1084	junction_1	51.6333225737023	615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336935	True	NA	21	True	AATAAA	-22	NA	30345154	30346857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345574_30346431_30346558_30346712
transcript_120442.known	chr6	+	577	5	FSM	ENSG00000241370.6	ENST00000433076.6	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	484.013106744022	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336911	True	NA	21	True	AATAAA	-22	NA	30345130	30346857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345399_30345466_30345574_30346431_30346558_30346712
transcript_120443.known	chr6	+	522	5	FSM	ENSG00000241370.6	ENST00000436442.2	522	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	454.514301205144	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336949	True	NA	21	True	AATAAA	-22	NA	30345168	30346857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345399_30345490_30345574_30346431_30346565_30346712
transcript_120444.known	chr6	+	450	4	FSM	ENSG00000241370.6	ENST00000489124.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	516.397133996694	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336931	True	NA	21	True	AATAAA	-22	NA	30345150	30346857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345229_30345297_30345399_30346431_30346558_30346712
transcript_120445.known	chr6	+	594	4	FSM	ENSG00000241370.6	ENST00000428040.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_3	40.5490101262931	1390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTCTGTTCTGTGGGTAT	30336939	True	NA	21	True	AATAAA	-22	NA	30345158	30346857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30345399_30345490_30345574_30346431_30346558_30346712
transcript_120447.known	chr6	+	2548	8	FSM	ENSG00000204592.9	ENST00000376630.5	2548	8	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_2	17.3075422983208	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTCATTTGTGCGT	30485494	True	NA	22	True	AATAAA	-19	NA	30489508	30494194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30489596_30489725_30489996_30490239_30490516_30491136_30491413_30491536_30491654_30492403_30492437_30492540_30492584_30492748
transcript_120451.known	chr6	+	851	2	FSM	ENSG00000235781.1	ENST00000415195.1	851	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACCTGGATCTCCCAGAG	NA	False	NA	NA	False	NA	NA	NA	30516265	30519217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30516612_30518712
transcript_120456.known	chr6	-	6801	12	FSM	ENSG00000204590.13	ENST00000376621.8	6801	12	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_7	35.2042446726983	1045	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTTGGATATGTTTCT	NA	False	NA	NA	False	AATAAA	-32	NA	30556489	30541380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30546314_30546695_30546837_30547111_30547275_30547351_30547531_30552466_30552662_30553083_30553180_30553349_30553558_30554574_30554647_30554763_30554916_30555054_30555192_30555554_30555721_30556130
transcript_120457.known	chr6	+	2005	5	FSM	ENSG00000204576.12	ENST00000498336.5	2005	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.836157786453	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556670	True	NA	78	True	AATAAA	-28	NA	30557315	30563723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30558149_30558213_30561327_30561509_30561833_30562125_30562388
transcript_120458.known	chr6	+	1845	4	FSM	ENSG00000204576.12	ENST00000376560.8	1845	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	12.328828005938	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557294	30563723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30558149_30558213_30561833_30562125_30562388
transcript_120459.known	chr6	+	1944	4	FSM	ENSG00000204576.12	ENST00000481741.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.43650214343336	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	30556668	True	NA	78	True	AATAAA	-28	NA	30557313	30563723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30561327_30561509_30561833_30562125_30562388
transcript_120460.nic	chr6	+	860	3	ISM	ENSG00000204576.12	ENST00000498336.5	2005	5	-224	1958	-188	-1958	5prime_fragment	FALSE	canonical	3	12	junction_2	3	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	NA	False	NA	10	True	AATAAA	-15	NA	30557091	30561765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30557451_30558149_30558213_30561327
transcript_120461.known	chr6	+	1797	3	FSM	ENSG00000204576.12	ENST00000376557.3	1797	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	14.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTGTTCTAGTCATCT	NA	False	NA	78	True	AATAAA	-28	NA	30557279	30563723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30561833_30562125_30562388
transcript_120463.nic	chr6	+	887	2	ISM	ENSG00000204576.12	ENST00000481741.5	1944	4	-312	1958	-278	-1958	5prime_fragment	FALSE	canonical	3	23	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACGGTTTATCAGGATTCA	NA	False	NA	10	True	AATAAA	-15	NA	30557001	30561765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30557451_30561327
transcript_120464.known	chr6	+	391	2	FSM	ENSG00000204576.12	ENST00000491173.1	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTTGTGGAAATACAC	30556701	True	NA	NA	False	GATAAA	-35	NA	30557346	30558436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30557451_30558149
transcript_120465.known	chr6	+	3426	25	FSM	ENSG00000204574.14	ENST00000441867.6	3426	25	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	92.285101346618	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	NA	False	NA	3	True	AAAAAG	-20	NA	30571423	30591522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_120468.known	chr6	+	3405	25	FSM	ENSG00000204574.14	ENST00000326195.13	3405	25	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	92.1285334012578	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGAACATGGGTCTC	30570057	True	NA	3	True	AAAAAG	-20	NA	30571441	30591522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393_30582508_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_12047.known	chr1	+	557	2	FSM	ENSG00000228606.3	ENST00000442130.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGGCCACTTCCTGGA	160261730	False	NA	NA	False	AATAAA	-17	NA	160261743	160262778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160261923_160262400
transcript_120471.nic	chr6	+	906	9	ISM	ENSG00000204574.14	ENST00000441867.6	3426	25	-58	9026	-27	2048	5prime_fragment	FALSE	canonical	3	298	junction_3	115.172696417163	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAACAGGTAAGACCT	NA	False	NA	99	True	AAAAAG	-14	NA	30571365	30582496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578072_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393
transcript_120472.nic	chr6	+	903	9	ISM	ENSG00000204574.14	ENST00000326195.13	3405	25	-76	9026	-27	2048	5prime_fragment	FALSE	canonical	3	299	junction_3	114.852554934577	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAACAGGTAAGACCT	NA	False	NA	99	True	AAAAAG	-14	NA	30571365	30582496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30582393
transcript_12048.known	chr1	-	1607	4	FSM	ENSG00000132716.19	ENST00000610139.5	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	120.781713111804	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTATACTGTTGTTATTCT	-160250398	True	NA	40	True	AATAAA	-17	NA	160262425	160239221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261359_160262116
transcript_120489.nic	chr6	+	652	7	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	-27	11342	-27	-477	5prime_fragment	FALSE	canonical	3	299	junction_3	131.90074130025	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAGGAAGAGAAGTCAA	NA	False	NA	8	True	NA	NA	NA	30571365	30579971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930
transcript_12049.known	chr1	-	501	4	FSM	ENSG00000132716.19	ENST00000440682.5	501	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	153.115062035785	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGAGCAGCCTCGGCGCC	-160250501	True	NA	1	True	NA	NA	NA	160262528	160240090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160261284_160261351_160262448
transcript_120493.nic	chr6	+	338	3	ISM	ENSG00000204574.14	ENST00000376545.7	3131	24	-27	13400	-27	-581	5prime_fragment	FALSE	canonical	3	649	junction_2	2.5	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAAGTGCCACAGGGCCC	NA	False	NA	3	True	NA	NA	NA	30571365	30577913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30571561_30577408_30577456_30577817
transcript_120497.known	chr6	+	3131	24	FSM	ENSG00000204574.14	ENST00000376545.7	3131	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	161.852321308789	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCACTGTTTGGAGATTG	NA	False	NA	15	True	AATAAA	-21	NA	30571392	30591313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577408_30577456_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405_30580520_30583065_30583189_30583607_30583709_30583804_30583891_30584191_30584332_30584417_30584567_30585259_30585344_30585557_30585683_30585878_30585992_30586133_30586306_30586473_30586549_30586640_30586712_30589687_30589721_30589805_30589975_30590148_30590214_30590305_30590379_30590534
transcript_120498.known	chr6	+	606	7	FSM	ENSG00000204574.14	ENST00000468958.1	606	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	240.783962644248	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAGAAGAAATTATAAAG	30570057	True	NA	NA	False	AATAAA	-32	NA	30571441	30580448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30571561_30577817_30577914_30578075_30578203_30578347_30578386_30578469_30578578_30579930_30580006_30580405
transcript_120499.known	chr6	-	4511	20	FSM	ENSG00000204569.10	ENST00000376511.7	4511	20	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_16	37.6854601380582	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCTTATTTAACCCCTAG	-30610564	True	NA	-14	True	AATAAA	-15	NA	30617243	30600412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30601659_30601935_30602692_30602845_30602960_30603209_30603286_30603471_30603667_30603779_30603844_30604007_30604255_30604352_30604512_30604587_30604736_30604993_30605095_30605922_30606036_30606137_30606244_30606467_30606642_30606778_30606857_30607839_30607892_30608778_30608915_30609076_30609164_30609837_30609956_30616477_30616999_30617223
transcript_1205.known	chr1	+	2747	7	FSM	ENSG00000157870.17	ENST00000419916.8	2747	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	91.3991551140138	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTGTGCTTTCTTCTTT	2586687	False	NA	19	True	AATAAA	-19	NA	2586776	2591468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588921_2589041_2589409
transcript_12050.known	chr1	-	517	3	FSM	ENSG00000132716.19	ENST00000407642.6	517	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	175.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGGAAGAAGAGCA	-160250421	True	NA	-10	True	NA	NA	NA	160262448	160240101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160240371_160243959_160244035_160262275
transcript_120501.known	chr6	+	1409	7	FSM	ENSG00000204568.12	ENST00000472229.1	1409	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	327.257501399467	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCTGTTTCCGATGAA	30609821	True	NA	28	True	AATAAA	-22	NA	30617859	30626395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30617944_30619492_30619602_30619680_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_120504.known	chr6	+	1398	7	FSM	ENSG00000204568.12	ENST00000259873.5	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	85.904339561838	5541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGGGCTGTTTCCGAT	30609801	True	NA	25	True	AATAAA	-19	NA	30617839	30626392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30617944_30619492_30619602_30619708_30619807_30619920_30619990_30622831_30622899_30624882_30624943_30625501
transcript_12051.known	chr1	-	4106	14	FSM	ENSG00000132716.19	ENST00000368073.7	4106	14	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	180.162057226002	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGTGGTATGTGGTC	-160250424	True	NA	-29	True	AGTAAA	-22	NA	160262451	160215714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160217709_160218323_160218441_160218848_160218969_160222650_160222782_160224441_160224550_160225061_160225120_160225590_160225664_160231296_160231408_160237134_160237230_160238606_160238748_160239696_160240371_160243959_160244035_160261284_160261359_160262116
transcript_120518.known	chr6	-	605	4	FSM	ENSG00000204569.10	ENST00000484449.1	605	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	79.9291352803636	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGGTTCGGGTCCCATA	-30610565	True	NA	NA	False	NA	NA	NA	30617244	30609946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30609956_30614548_30614603_30616477_30616999_30617223
transcript_12052.known	chr1	-	5318	33	FSM	ENSG00000122218.16	ENST00000241704.8	5318	33	0	0	0	0	multi-exon	TRUE	canonical	3	721	junction_17	64.4837370485768	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAAAAAGCTATTC	-160328982	True	NA	NA	False	AATAAA	-28	NA	160343250	160288593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160290217_160290491_160290687_160291334_160291497_160291818_160291930_160292011_160292199_160292483_160292621_160293165_160293235_160293385_160293464_160294483_160294594_160294767_160294858_160295735_160295860_160296060_160296150_160297342_160297439_160297555_160297746_160298844_160298992_160299101_160299265_160305432_160305572_160305687_160305774_160306353_160306494_160307162_160307246_160309100_160309177_160310191_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_120520.known	chr6	+	1476	13	FSM	ENSG00000137343.18	ENST00000376485.8	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_10	48.5771865751358	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626844	False	NA	15	True	AATAAA	-23	NA	30626855	30646823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_120523.known	chr6	+	1738	13	FSM	ENSG00000137343.18	ENST00000330083.6	1738	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	62.2561911245246	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626850	True	NA	13	True	AATAAA	-21	NA	30626873	30646821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30627275_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_120526.known	chr6	+	1195	12	FSM	ENSG00000137343.18	ENST00000468713.5	1195	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	58.1546811714135	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626869	True	NA	15	True	AATAAA	-23	NA	30626892	30646823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066_30646110_30646468
transcript_120529.nic	chr6	+	1420	12	NIC	ENSG00000137343.18	novel	1476	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_7	55.9144860663685	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTGTTGAAAAATTTGAC	30626829	False	NA	13	True	AATAAA	-21	NA	30626840	30646821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30645894_30645975_30646066_30646110_30646468
transcript_120533.known	chr6	+	2119	11	FSM	ENSG00000137343.18	ENST00000329992.12	2119	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	66.3554820644082	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626862	True	NA	NA	False	AAAAAG	-17	NA	30626885	30644679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767_30643012_30643528
transcript_120534.known	chr6	+	1527	11	FSM	ENSG00000137343.18	ENST00000471782.5	1527	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	59.1236839176992	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTGAAAAATTTGACTC	30626896	False	NA	15	True	AATAAA	-23	NA	30626919	30646823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30645894_30645975_30646066
transcript_120541.known	chr6	+	2646	10	FSM	ENSG00000137343.18	ENST00000376483.8	2646	10	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_8	45.7815532423699	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626852	True	NA	NA	False	AAAAAG	-17	NA	30626875	30644679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534_30640604_30642175_30642248_30642767
transcript_120543.known	chr6	+	2061	10	FSM	ENSG00000137343.18	ENST00000319027.9	2061	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	74.6097666793739	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626851	True	NA	NA	False	AAAAAG	-17	NA	30626874	30644679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767_30643012_30643528
transcript_120547.known	chr6	+	2611	9	FSM	ENSG00000137343.18	ENST00000318999.11	2611	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	55.578772926361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCAGCCTCATTTGTGC	30626830	False	NA	NA	False	AAAAAG	-17	NA	30626841	30644679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30642175_30642248_30642767
transcript_12055.nic	chr1	-	1697	12	ISM	ENSG00000122218.16	ENST00000649231.1	3969	31	-33	20118	-4	-815	5prime_fragment	FALSE	canonical	3	785	junction_4	61.5708957756144	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATGACATTCTAATTT	-160329009	True	NA	NA	False	NA	NA	NA	160343277	160309744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_160310259_160311867_160312019_160313084_160313168_160313989_160314126_160323430_160323531_160325542_160325653_160332447_160332558_160333602_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_120551.known	chr6	+	718	8	FSM	ENSG00000137343.18	ENST00000493388.5	718	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_7	36.3845672599507	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATTCTAAAGCAACCCAAG	30626891	False	NA	NA	False	NA	NA	NA	30626914	30640698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30626993_30627459_30627521_30627635_30627728_30627850_30627912_30628031_30628146_30628328_30628431_30640376_30640423_30640534
transcript_120555.known	chr6	-	3406	20	FSM	ENSG00000204560.10	ENST00000376442.8	3406	20	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_19	28.1977583046455	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGTGATATGTGAAATTC	-30672877	True	NA	-21	True	AATAAA	-44	NA	30673006	30653126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30653371_30654705_30654880_30655174_30655337_30655434_30655598_30656197_30656266_30656390_30656510_30656596_30656760_30656951_30657093_30659471_30659625_30659735_30659835_30660031_30660243_30662626_30662743_30662910_30663022_30664800_30664993_30665070_30665275_30665478_30665734_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_120559.known	chr6	+	1402	6	FSM	ENSG00000204564.12	ENST00000376473.9	1402	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	25.822470834527	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCAGGTTCTGTTT	NA	False	NA	12	True	ATTAAA	-22	NA	30647072	30653210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_120564.known	chr6	+	1496	6	FSM	ENSG00000204564.12	ENST00000446773.6	1496	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	30.017328328817	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	NA	False	NA	26	True	AATAAA	-26	NA	30647420	30653109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30647847_30649557_30649960_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_120571.nic	chr6	+	1458	5	ISM	ENSG00000204564.12	ENST00000376473.9	1402	6	-73	101	-39	0	intron_retention	FALSE	canonical	3	51	junction_1	26.6176633084123	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACATATCACTTTCTCT	NA	False	NA	26	True	AATAAA	-26	NA	30646999	30653109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30647304_30649557_30649960_30650993_30651083_30651265_30651467_30652647
transcript_120573.known	chr6	+	614	5	FSM	ENSG00000204564.12	ENST00000376471.8	614	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.0732870307258	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTGGAGTGGAG	NA	False	NA	NA	False	GGGGCT	-44	NA	30647163	30652915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30647304_30650993_30651083_30651265_30651467_30652647_30652718_30652801
transcript_120578.nnic	chr6	-	1051	5	NNC	ENSG00000204560.10	novel	3406	20	NA	NA	-33	-2892	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	82.2465804760295	81	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAATGACTGCTTTT	-30672910	True	NA	-1	True	AATAAA	-24	NA	30673039	30668021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30668209_30670409_30670467_30670789_30670953_30671035_30671275_30672634
transcript_120584.known	chr6	-	1328	4	FSM	ENSG00000146112.12	ENST00000488324.1	1328	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8619042659763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686506	False	687	-5	True	AATAAA	-17	NA	30687193	30676388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30684545_30687113
transcript_120585.known	chr6	-	2853	4	FSM	ENSG00000146112.12	ENST00000399199.7	2853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.8619042659763	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686529	False	687	-5	True	AATAAA	-17	NA	30687216	30676388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30684407_30686047_30687113
transcript_120586.known	chr6	-	1156	3	FSM	ENSG00000146112.12	ENST00000467662.5	1156	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30686471	False	687	-5	True	AATAAA	-17	NA	30687158	30676388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30677289_30679178_30679390_30687113
transcript_120587.nic	chr6	-	1209	2	ISM	ENSG00000146112.12	ENST00000615892.4	1448	3	5257	0	5257	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCTGCTTCTCCTTCTT	-30679079	False	NA	-5	True	AATAAA	-17	NA	30679487	30676388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_30677289_30679178
transcript_12059.known	chr1	-	616	5	FSM	ENSG00000122218.16	ENST00000541366.1	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_1	62.7435255624036	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTGCAAAATAATAAATG	-160328991	True	NA	NA	False	NA	NA	NA	160343259	160333461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160333680_160335241_160335323_160339908_160339983_160340180_160340295_160343130
transcript_120592.known	chr6	-	1453	4	FSM	ENSG00000137404.15	ENST00000470733.1	1453	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	31.2018517968975	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	NA	False	NA	-8	True	AATAAA	-21	NA	30691002	30688046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690024_30690244_30690841
transcript_120593.known	chr6	-	1411	4	FSM	ENSG00000137404.15	ENST00000376421.7	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.40870359029762	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	-30690297	True	NA	-10	True	AATAAA	-19	NA	30690984	30688048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690046_30690244_30690841
transcript_120594.known	chr6	-	1228	3	FSM	ENSG00000137404.15	ENST00000376420.9	1228	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690289	True	NA	-8	True	AATAAA	-21	NA	30690976	30688046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30690046_30690244_30690841
transcript_120595.nnic	chr6	-	1284	3	NNC	ENSG00000137404.15	novel	1411	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	40.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCATGCAGTCTGTCAG	-30690049	False	NA	-10	True	AATAAA	-19	NA	30690736	30688048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30688943_30689275_30689453_30690523
transcript_120596.known	chr6	-	1199	3	FSM	ENSG00000137404.15	ENST00000482141.5	1199	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690280	True	NA	-8	True	AATAAA	-21	NA	30690967	30688046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30689275_30689453_30690841
transcript_120597.known	chr6	-	1029	2	FSM	ENSG00000137404.15	ENST00000474864.5	1029	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCAGTCTGTCAGTG	-30690287	True	NA	-8	True	AATAAA	-21	NA	30690974	30688046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30688943_30690841
transcript_120602.known	chr6	+	2632	4	FSM	ENSG00000196230.14	ENST00000330914.7	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	4755.32256178975	3379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721022	False	NA	36	True	AATAAA	-20	NA	30721573	30725426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30721899_30722536_30722646_30722917_30723029_30723339
transcript_120604.known	chr6	+	2823	4	FSM	ENSG00000196230.14	ENST00000396384.1	2823	4	0	0	0	0	multi-exon	FALSE	canonical	2	859	junction_1	4759.09265395084	3338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGATGTGTGCTTATTTAG	30721147	False	NA	36	True	AATAAA	-20	NA	30721698	30725426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30722215_30722536_30722646_30722917_30723029_30723339
transcript_120611.known	chr6	-	6968	15	FSM	ENSG00000137337.16	ENST00000376406.8	6968	15	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_7	74.55983078942	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTAGTGTAGTTTTTTA	-30713419	True	NA	-1	True	AATAAA	-19	NA	30717281	30699806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30700633_30702552_30702664_30702751_30702878_30703103_30703287_30703417_30703538_30703620_30706099_30707383_30707455_30707565_30708358_30711411_30711505_30711666_30711727_30711873_30713355_30713647_30713718_30713802_30714184_30715039_30715179_30717244
transcript_120612.known	chr6	+	2515	4	FSM	ENSG00000196230.14	ENST00000327892.13	2515	4	0	0	0	0	multi-exon	FALSE	canonical	3	10808	junction_2	550.255900064284	9538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCGAGATGTGTGCTTAT	NA	False	NA	32	True	AATAAA	-16	NA	30720351	30725422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30720564_30722536_30722646_30722917_30723029_30723339
transcript_120615.nic	chr6	-	1701	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	0	-121	combination_of_known_junctions	FALSE	canonical	3	46	junction_12	206.125012633919	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30740303	True	NA	-15	True	ATTAAA	-14	NA	30742500	30727829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742383
transcript_120616.nic	chr6	-	1647	13	NIC	ENSG00000137312.15	novel	1866	13	NA	NA	-5	-121	combination_of_known_junctions	FALSE	canonical	3	84	junction_12	196.581390410068	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTTGTCTAGAATATTT	-30740332	True	NA	-15	True	ATTAAA	-14	NA	30742529	30727829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742466
transcript_120617.known	chr6	-	1866	13	FSM	ENSG00000137312.15	ENST00000376389.8	1866	13	0	0	0	0	multi-exon	FALSE	canonical	3	523	junction_9	87.1066954308846	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCCGGCACAGTGG	-30742662	False	NA	-13	True	AATAAA	-22	NA	30742687	30727708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30728146_30730021_30730187_30730427_30730566_30730681_30730728_30730918_30731101_30740157_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741613_30741705_30741791_30741868_30742146_30742204_30742526
transcript_12062.known	chr1	+	2822	17	FSM	ENSG00000162736.17	ENST00000294785.10	2822	17	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	28.2486172227952	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTTGTACTGCTAGTTAT	160338889	True	NA	13	True	ATTAAA	-16	NA	160343382	160358949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104_160350251_160351221_160351373_160351695_160351806_160352053_160352207_160352886_160352992_160353159_160353238_160354117_160354291_160355654_160355758_160355862_160355959_160356259_160356348_160356599_160356755_160357040_160357254_160358148
transcript_120651.known	chr6	-	1001	2	FSM	ENSG00000137312.15	ENST00000484693.1	1001	2	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCTACTCTGGCTACAG	-30742652	False	NA	NA	False	NA	NA	NA	30742677	30741353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30742204_30742526
transcript_120652.known	chr6	-	852	7	FSM	ENSG00000137312.15	ENST00000470643.5	852	7	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_4	255.724895585514	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGAGCCACTGCCAGGCC	-30742707	False	NA	NA	False	NA	NA	NA	30742732	30740157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30740311_30740495_30740592_30740678_30740799_30741189_30741334_30741791_30741868_30742146_30742204_30742526
transcript_120653.known	chr6	+	527	2	FSM	ENSG00000272273.2	ENST00000607333.2	573	2	0	46	0	-43	multi-exon	FALSE	canonical	3	27	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCTTGCATAAGTTAAAA	NA	False	NA	-35	True	AATAAA	-40	NA	30742928	30743592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30743097_30743233
transcript_120655.known	chr6	-	1350	1	FSM	ENSG00000137331.12	ENST00000376377.2	1350	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	632	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744548	30743198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30743200_30744500
transcript_120656.known	chr6	-	1237	2	FSM	ENSG00000137331.12	ENST00000259874.6	1237	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGAGTGTATCTTTGCA	NA	False	NA	-17	True	AATAAA	-19	NA	30744547	30743198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30744197_30744308
transcript_12068.nic	chr1	+	898	5	ISM	ENSG00000162736.17	ENST00000421914.5	776	7	-89	2771	-19	261	5prime_fragment	FALSE	canonical	3	321	junction_3	20.920982290514	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGATTATTTTATAG	160338803	True	NA	NA	False	NA	NA	NA	160343296	160350466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_160343482_160344721_160344827_160348998_160349123_160349548_160349671_160350104
transcript_120688.nnic	chr6	-	1046	4	NNC	ENSG00000237923.1	novel	799	3	NA	NA	-155	451	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	49.8285950924656	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTCAATTTTTTGTT	NA	False	NA	-9	True	AATAAA	-21	NA	30848314	30839074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30839464_30839822_30840020_30847036_30847150_30847967
transcript_1207.known	chr1	+	2689	7	FSM	ENSG00000157870.17	ENST00000378427.6	2689	7	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	83.7365246207147	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCACTTTTTGTGCTTTCT	2586708	False	NA	14	True	AATAAA	-14	NA	2586797	2591463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2586949_2587090_2587296_2587740_2587793_2588389_2588454_2588549_2588626_2588953_2589041_2589409
transcript_120706.known	chr6	-	799	3	FSM	ENSG00000237923.1	ENST00000442852.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	41.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAGGAGTTCGAGACCAG	NA	False	NA	NA	False	NA	NA	NA	30848159	30839525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30840020_30847036_30847150_30847967
transcript_12071.known	chr1	+	5354	8	FSM	ENSG00000162738.6	ENST00000368061.3	5354	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	27.4575739523167	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGCATTCTGTTGCTTT	160395215	True	NA	11	True	AATAAA	-16	NA	160400563	160428670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160400870_160415647_160415909_160416061_160416183_160419001_160419610_160420410_160420548_160421051_160421188_160424051_160424284_160425117
transcript_12072.known	chr1	+	1370	4	FSM	ENSG00000228863.8	ENST00000443928.6	1370	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTAAAATGGCAGGAAT	160672996	False	NA	NA	False	NA	NA	NA	160673011	160684067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_160673655_160676359_160676505_160678942_160679056_160683598
transcript_120728.nic	chr6	-	510	2	ISM	ENSG00000237923.1	ENST00000442852.1	799	3	-208	7514	-208	-7514	5prime_fragment	FALSE	canonical	3	151	junction_1	0	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTAACTTTTTTTT	NA	False	NA	-12	True	AATAAA	-19	NA	30848367	30847039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_30847150_30847967
transcript_120731.known	chr6	+	3588	17	FSM	ENSG00000204580.14	ENST00000418800.6	3588	17	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	136.195573991962	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTGGGGGTAGCCCCGCC	30882330	False	NA	NA	False	NA	NA	NA	30882612	30899840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30882984_30888687_30888815_30888907_30889011_30889201_30889431_30890972_30891121_30891379_30891480_30892001_30892189_30892295_30892543_30893067_30893164_30893271_30893424_30894505_30894672_30896620_30896866_30897013_30897142_30897378_30897598_30898072_30898308_30898887_30899038_30899155
transcript_120732.known	chr6	+	3575	30	FSM	ENSG00000137411.19	ENST00000676266.1	3575	30	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_1	32.4565015774841	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTCTGTTTATGGCTCTT	30912686	True	NA	11	True	GATAAA	-17	NA	30914237	30926459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30914345_30914809_30915038_30915155_30915238_30915354_30915456_30915745_30915868_30915980_30916048_30916151_30916250_30916877_30916960_30917104_30917225_30917694_30917807_30918826_30918916_30919757_30919849_30920088_30920217_30920332_30920437_30920667_30920750_30921064_30921142_30921229_30921306_30921588_30921692_30921924_30921996_30922115_30922242_30922449_30922555_30922705_30922775_30922897_30922977_30923103_30923232_30923352_30923506_30924353_30924561_30925273_30925386_30925543_30925720_30925879_30926009_30926108
transcript_120740.known	chr6	+	1712	14	FSM	ENSG00000213780.11	ENST00000259895.9	1712	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	5.47938579031019	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908191	False	NA	35	True	AATAAA	-17	NA	30908206	30914106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30908404_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_120742.known	chr6	+	1673	14	FSM	ENSG00000213780.11	ENST00000376316.5	1673	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9.02003030735275	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGGTCCCGGGCGCCTCC	30908205	False	NA	35	True	AATAAA	-17	NA	30908220	30914106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_30908379_30909033_30909174_30909434_30909540_30909931_30910064_30910664_30910762_30910852_30910942_30911157_30911270_30911430_30911500_30911683_30911768_30912013_30912147_30912327_30912459_30913109_30913158_30913308_30913388_30913810
transcript_12075.known	chr1	-	1161	8	FSM	ENSG00000158764.7	ENST00000368029.4	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	4.89064079103534	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATGTTTCTTTGAATTC	-160954420	True	NA	-4	True	ACTAAA	-17	NA	160954809	160945024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_160945293_160947928_160948033_160950045_160950167_160950552_160950712_160951042_160951291_160952619_160952734_160954386_160954451_160954726
transcript_120753.nic	chr6	+	611	3	ISM	ENSG00000213780.11	ENST00000453897.4	598	5	-55	965	-39	-965	5prime_fragment	FALSE	canonical	3	21	junction_1	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTTTTCCCTTTTAT	30908152	False	NA	NA	False	AATAAA	-21	NA	30908167	30909669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_30908404_30909033_30909174_30909434
transcript_120755.nnic	chr6	-	420	3	NNC	ENSG00000233529.1	novel	605	3	NA	NA	-951	-7686	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGTTTTTTTTGTTTTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	30955813	30953664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_30953712_30954776_30954916_30955579
transcript_120756.known	chr6	-	446	3	FSM	ENSG00000196260.5	ENST00000359086.4	446	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTTGCTTGACTCTGTGG	NA	False	NA	NA	False	AATAAA	-25	NA	30932170	30931352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_30931575_30931706_30931796_30932035
transcript_120757.known	chr6	-	1156	2	FSM	ENSG00000204542.3	ENST00000259870.4	1156	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTTCTCCTTGGTTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	31112575	31111222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31112292_31112488
transcript_120758.known	chr6	+	655	4	FSM	ENSG00000204540.11	ENST00000547221.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTTGTTCCCTGCCTGGTC	NA	False	NA	NA	False	AATAAA	-15	NA	31137648	31140037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31137682_31138358_31138460_31138655_31138780_31139640
transcript_120761.nnic	chr6	-	1141	3	NNC	ENSG00000204538.4	novel	868	2	NA	NA	-741	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCTAGGCTGCTGC	NA	False	NA	-5	True	AATAAA	-17	NA	31139807	31137533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_31138307_31138971_31139073_31139540
transcript_120762.nnic	chr6	-	1036	2	NNC	ENSG00000204538.4	novel	868	2	NA	NA	-730	7	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGCTGCTGCTTTAACT	NA	False	NA	2	True	AATAAA	-24	NA	31139796	31137526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_31138307_31139540
transcript_120763.known	chr6	-	868	2	FSM	ENSG00000204538.4	ENST00000259845.5	868	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATCTAGGCTGCTGC	-31139054	True	NA	-5	True	AATAAA	-17	NA	31139066	31137533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31138307_31138971
transcript_120764.known	chr6	+	459	2	FSM	ENSG00000204540.11	ENST00000479581.5	459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTCCCTGCCTGGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	31114830	31140038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31114892_31139640
transcript_120765.known	chr6	+	501	2	FSM	ENSG00000204540.11	ENST00000481450.2	501	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGTTCCCTGCCTGGTCC	NA	False	NA	NA	False	AATAAA	-16	NA	31138356	31140038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31138460_31139640
transcript_120768.known	chr6	-	2684	19	FSM	ENSG00000204536.15	ENST00000652535.1	2684	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	51.761203832815	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTACAGAAGGAGCCATTG	-31157258	False	NA	-16	True	AATAAA	-4	NA	31158214	31142451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31148891_31148988_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_120774.known	chr6	-	2625	18	FSM	ENSG00000204536.15	ENST00000376266.9	2625	18	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_17	37.0597572244656	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTTTGGAAATGTTA	-31157282	False	NA	-3	True	AATAAA	-17	NA	31158238	31142438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31142717_31142962_31143135_31143261_31143414_31144686_31144789_31144884_31145074_31145165_31145303_31145447_31145494_31145695_31145809_31148404_31148512_31148617_31148729_31150065_31150216_31150454_31150566_31150724_31150861_31150958_31151123_31154495_31154800_31156730_31156945_31157022_31157090_31158166
transcript_120789.known	chr6	-	1409	5	FSM	ENSG00000204531.21	ENST00000259915.13	1409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2698.14680614306	100864	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTGTCCTTCAGTT	NA	False	NA	-2	True	AATAAA	-33	NA	31170682	31164336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31164868_31165127_31165287_31165570_31165702_31165926_31166048_31170215
transcript_120816.known	chr6	+	3243	4	FSM	ENSG00000137310.12	ENST00000376257.8	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	10.8730042868667	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTCCCTCTGATGTTGTG	NA	False	NA	16	True	AATAAA	-17	NA	31158588	31164215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31158723_31158896_31159708_31161446_31162006_31162476
transcript_120830.known	chr6	-	593	3	FSM	ENSG00000204528.3	ENST00000412143.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGGTGACTTTCTAA	NA	False	NA	0	True	AATAAA	-18	NA	31177899	31173734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31174034_31174237_31174271_31177638
transcript_120844.known	chr6	-	1554	8	FSM	ENSG00000204525.18	ENST00000383329.7	1554	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	224.569247535756	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31272029	True	NA	-5	True	AATAAA	-21	NA	31272086	31268748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269544_31269965_31270086_31270209_31270486_31271072_31271349_31271598_31271869_31271998
transcript_120845.known	chr6	-	1880	6	FSM	ENSG00000204525.18	ENST00000487245.5	1880	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	228.184486764548	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATGTTCGCTGTGCTG	-31271993	False	NA	-5	True	AATAAA	-21	NA	31272050	31268748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31269174_31269337_31269386_31269492_31269526_31269965_31270086_31270209_31270486_31271072
transcript_120846.known	chr6	+	1203	1	FSM	ENSG00000227939.1	ENST00000413027.1	1203	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGGAACAGATATTGCA	NA	False	NA	NA	False	AAGAAA	-31	NA	31280316	31281519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31280300_31281500
transcript_120856.known	chr6	-	1536	8	FSM	ENSG00000234745.13	ENST00000412585.7	1536	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	108.88975889328	1839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATCTGCATGTTCGCTGTG	-31357094	True	NA	-9	True	AATAAA	-18	NA	31357179	31353874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31354297_31354478_31354527_31354632_31354666_31355106_31355224_31355316_31355593_31356166_31356443_31356687_31356958_31357085
transcript_120883.known	chr6	-	917	3	FSM	ENSG00000234745.13	ENST00000497377.5	917	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_2	10	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATGTTCGCTGTGCTG	-31354991	False	NA	-6	True	AATAAA	-21	NA	31355076	31353871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31354297_31354478_31354527_31354632
transcript_120884.known	chr6	-	753	2	FSM	ENSG00000234745.13	ENST00000481849.5	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_1	0	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCATGTTCGCTGTGCTG	-31354721	False	NA	-6	True	AATAAA	-21	NA	31354806	31353871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31354297_31354478
transcript_120888.nnic	chr6	-	1505	2	Genic_Genomic	ENSG00000272221.1	novel	1207	1	NA	NA	-5152	-18	multi-exon	FALSE	canonical	2	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTTCTCCAAGGAGT	NA	False	NA	-37	True	AATAAA	-1	NA	31400647	31394306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_31395218_31400053
transcript_120893.known	chr6	+	2260	6	FSM	ENSG00000204520.14	ENST00000616296.4	2260	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.0042853863476	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGTGTCATTGTTTTTG	NA	False	NA	8	True	NA	NA	NA	31399783	31415313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31400784_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_120901.known	chr6	+	9148	2	FSM	ENSG00000206337.12	ENST00000414046.3	9148	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTAATGATTAAGACTT	NA	False	NA	NA	False	TATAAA	-22	NA	31463169	31472408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31463280_31463370
transcript_120903.known	chr6	+	1370	6	FSM	ENSG00000204520.14	ENST00000449934.7	1370	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	10.9068785635488	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGTCATTGTTTTTGTT	31403498	True	NA	10	True	NA	NA	NA	31403594	31415315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31403703_31410542_31410798_31411071_31411360_31411946_31412226_31412324_31412461_31415011
transcript_120904.known	chr6	+	2005	2	FSM	ENSG00000206337.12	ENST00000666495.2	2005	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGCTTAATGTTTTATA	31463128	True	NA	NA	False	AATAAA	-13	NA	31463184	31478936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31463280_31477026
transcript_120905.known	chr6	+	2411	6	FSM	ENSG00000204516.10	ENST00000538442.5	2411	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.5935617870109	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATTTCTGGTCTGTGTTTT	31494443	True	NA	NA	False	TTTAAA	-4	NA	31494880	31511123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31494996_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_120906.known	chr6	+	2416	6	FSM	ENSG00000204516.10	ENST00000252229.7	2416	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	19.1039262980153	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTCTGGTCTGTGTTTTA	31497707	False	NA	NA	False	AATAGA	-1	NA	31498144	31511124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31498264_31505616_31505872_31506142_31506431_31507021_31507301_31507399_31507532_31509781
transcript_120907.known	chr6	-	2068	2	FSM	ENSG00000286940.1	ENST00000665353.1	2068	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATGCCATGAGTAAAA	NA	False	NA	NA	False	AATAAA	-22	NA	31494935	31479972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31481359_31494253
transcript_120945.known	chr6	+	1411	4	FSM	ENSG00000204498.11	ENST00000376146.8	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	15.1730755689881	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	NA	False	NA	31	True	NA	NA	NA	31546869	31558829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31546974_31548162_31548440_31557627_31557850_31558021
transcript_120946.known	chr6	-	1370	3	FSM	ENSG00000213760.11	ENST00000303892.10	1370	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTTTGCCTCATCATTT	-31546530	True	NA	0	True	AATAAA	-38	NA	31546608	31544443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31545582_31546108_31546210_31546477
transcript_120947.known	chr6	-	662	3	FSM	ENSG00000213760.11	ENST00000483251.1	662	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTGTTGTTCTTTAAC	NA	False	NA	NA	False	TATAAA	-20	NA	31546848	31545237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31545582_31546108_31546210_31546631
transcript_120948.known	chr6	-	2003	11	FSM	ENSG00000198563.14	ENST00000458640.5	2003	11	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_10	389.023713930141	5232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31542370	False	NA	-2	True	ACTAAA	-32	NA	31542448	31530218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_120949.known	chr6	+	710	2	FSM	ENSG00000204511.3	ENST00000376191.3	710	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACATGTGTTTCATTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	31528961	31530232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31529186_31529746
transcript_120950.known	chr6	-	4027	10	FSM	ENSG00000198563.14	ENST00000462256.5	4027	10	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_9	409.06590371265	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31505214	True	NA	-2	True	ACTAAA	-32	NA	31542017	31530218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541949
transcript_120951.known	chr6	-	1681	11	FSM	ENSG00000198563.14	ENST00000396172.6	1681	11	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_10	340.47208402452	5740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATAAGTGCTTCGTCCCT	-31505200	True	NA	-9	True	ACTAAA	-25	NA	31542003	31530225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540665_31541949
transcript_120952.known	chr6	-	857	6	FSM	ENSG00000198563.14	ENST00000484566.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	716.839340438288	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31498672	False	161	-2	True	ACTAAA	-32	NA	31535475	31530218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530927_31531052_31531179_31531295_31531406_31532779_31532912_31535366
transcript_120953.known	chr6	-	1529	10	FSM	ENSG00000198563.14	ENST00000376177.6	1529	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	570.378042276446	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTCGTCCCTTTATTGT	-31540458	False	NA	-2	True	ACTAAA	-32	NA	31540536	31530218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31530451_31530778_31530950_31531052_31531198_31531295_31531406_31532779_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321
transcript_120954.known	chr6	+	1451	4	FSM	ENSG00000204498.11	ENST00000376148.9	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	10.7082522694727	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	31547010	True	NA	31	True	NA	NA	NA	31547607	31558829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557850_31558021
transcript_120955.known	chr6	+	1401	4	FSM	ENSG00000204498.11	ENST00000376145.8	1401	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	20.8219969156552	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCAGTGTCTCCTCTGTC	31547015	True	NA	31	True	NA	NA	NA	31547612	31558829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31547752_31548162_31548440_31557627_31557805_31558021
transcript_120956.known	chr6	-	1005	7	FSM	ENSG00000198563.14	ENST00000427214.5	1005	7	0	0	0	0	multi-exon	FALSE	canonical	1	20	junction_6	569.747799956749	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGTTAGACGTCCAGTAG	-31541453	False	NA	NA	False	NA	NA	NA	31541531	31532779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31532912_31535366_31535486_31536499_31536684_31538762_31538856_31539146_31539275_31540321_31540535_31541395
transcript_120960.known	chr6	-	1097	4	FSM	ENSG00000204475.10	ENST00000376073.8	1097	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGTTTTTTTTATTT	NA	False	NA	NA	False	AATAAA	-35	NA	31592985	31588894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31589232_31589525_31589634_31589781_31590127_31592678
transcript_120962.known	chr6	+	607	6	FSM	ENSG00000204472.13	ENST00000337917.11	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	37.5957444400294	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	31615117	True	NA	21	True	AATAAA	-22	NA	31615226	31617021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31615294_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_120963.known	chr6	+	655	6	FSM	ENSG00000204472.13	ENST00000376059.8	655	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.9635727314629	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCAAGTCAGCTTAGTTTT	31615124	True	NA	15	True	AATAAA	-16	NA	31615233	31617015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31615355_31615520_31615583_31615669_31615737_31616103_31616146_31616343_31616507_31616815
transcript_120971.known	chr6	+	524	3	FSM	ENSG00000204472.13	ENST00000376049.4	524	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	11.5	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCTTAGTTTTTATTTG	31615889	False	NA	21	True	AATAAA	-22	NA	31615990	31617021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31616146_31616343_31616507_31616815
transcript_120980.known	chr6	-	3644	25	FSM	ENSG00000204463.14	ENST00000375976.8	3644	25	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_24	76.668614105701	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	-31651399	False	NA	-13	True	AATAAA	-31	NA	31652393	31639027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652246
transcript_120981.known	chr6	-	3779	25	FSM	ENSG00000204463.14	ENST00000211379.9	3779	25	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_24	77.9641566504905	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCTCCATTAGGTAGT	NA	False	NA	-13	True	AATAAA	-31	NA	31652705	31639027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31639499_31639647_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_120987.known	chr6	-	3626	24	FSM	ENSG00000204463.14	ENST00000362049.10	3626	24	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_23	83.8609660432605	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTGTCTCCATTAGGTAG	NA	False	NA	-14	True	AATAAA	-30	NA	31652700	31639028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31639227_31640198_31640307_31640384_31640529_31640644_31640705_31640791_31640939_31641103_31641229_31641319_31641423_31641538_31641593_31641775_31641946_31642111_31642404_31642828_31643116_31643889_31643978_31644081_31644195_31644524_31644603_31644945_31645199_31645406_31645605_31646393_31646524_31647590_31647827_31648676_31648752_31648910_31648965_31649198_31649396_31649509_31649628_31651655_31651777_31652423
transcript_121011.known	chr6	+	709	6	FSM	ENSG00000204444.11	ENST00000375920.8	709	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.84465567848098	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31652131	True	NA	9	True	AATAAA	-20	NA	31652416	31658210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_121014.known	chr6	+	761	6	FSM	ENSG00000204444.11	ENST00000375916.4	761	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.77752524926425	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31655879	False	NA	9	True	AATAAA	-20	NA	31655893	31658210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31656081_31656471_31656627_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_121017.known	chr6	+	922	5	FSM	ENSG00000204444.11	ENST00000375918.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	6.17960354715414	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACTGACCTGTAACTTCAT	31652130	True	NA	NA	False	NA	NA	NA	31652415	31658082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31652552_31656471_31656627_31657224_31657299_31657379_31657479_31657624
transcript_121018.nnic	chr6	+	567	5	NIC	ENSG00000204444.11	novel	709	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	9.75640815054393	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATTCTGGGGTTTGTCT	31652118	True	NA	9	True	AATAAA	-20	NA	31652403	31658210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_31652552_31657224_31657299_31657379_31657479_31657624_31657724_31658063
transcript_121028.known	chr6	-	2481	1	FSM	ENSG00000204439.4	ENST00000375911.2	2481	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTTTAGGTGGTAGA	-31660566	False	NA	31	True	NA	NA	NA	31660778	31658297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31658300_31660800
transcript_121032.known	chr6	+	1061	7	FSM	ENSG00000204435.15	ENST00000375885.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	431.474893050955	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	NA	False	NA	17	True	AATAAA	-20	NA	31665235	31670070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31665494_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_121034.known	chr6	+	908	7	FSM	ENSG00000204435.15	ENST00000375865.6	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	432.954353508799	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666183	True	NA	17	True	AATAAA	-20	NA	31666291	31670070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31666397_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_121035.known	chr6	+	936	7	FSM	ENSG00000204435.15	ENST00000375866.2	936	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	435.543593940058	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGTCTGCTGGTGCTTGC	31666246	False	NA	17	True	AATAAA	-20	NA	31666354	31670070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31666488_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_121047.known	chr6	-	1800	4	FSM	ENSG00000204438.11	ENST00000375895.6	1800	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	72.9566081082904	1304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665638	False	NA	-4	True	AATAAA	-28	NA	31665850	31662075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31662711_31663852_31664578_31664840_31665004_31665573
transcript_121052.known	chr6	-	1814	4	FSM	ENSG00000204438.11	ENST00000375900.8	1814	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	70.9804354890995	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGCTATTTTGAGGAA	-31665649	False	NA	-4	True	AATAAA	-28	NA	31665861	31662075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31662711_31663852_31664581_31664840_31665004_31665573
transcript_121057.known	chr6	+	929	7	FSM	ENSG00000204435.15	ENST00000375882.7	929	7	0	0	0	0	multi-exon	FALSE	canonical	3	1079	junction_6	55.5930151487877	6799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCTAGTCTGCTGGTGCT	31648064	True	NA	14	True	AATAAA	-17	NA	31666079	31670067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31666209_31666820_31666904_31667867_31667971_31668538_31668655_31669096_31669173_31669318_31669509_31669835
transcript_121061.nnic	chr6	-	954	3	NNC	ENSG00000204428.12	novel	950	4	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTATGTCTCTTTCTTCTG	NA	False	NA	-1	True	AATAAA	-18	NA	31681529	31676683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_31677121_31679100_31679269_31681180
transcript_121062.known	chr6	-	836	3	FSM	ENSG00000204428.12	ENST00000474395.5	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTAAACTGTTTGGT	NA	False	NA	-17	True	AATAAA	-2	NA	31681476	31676699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31677121_31679100_31679269_31681229
transcript_121065.known	chr6	-	1906	18	FSM	ENSG00000204427.12	ENST00000440843.2	1906	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_17	57.5525034854214	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGGGTGAGAGGAGACAT	-31702934	False	NA	NA	False	NA	NA	NA	31703070	31687185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702611
transcript_121066.nic	chr6	-	1869	18	NIC	ENSG00000204427.12	novel	1892	19	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_17	51.1398787369684	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	NA	False	NA	-3	True	AATAAA	-18	NA	31703344	31686958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31703149
transcript_121075.known	chr6	+	402	3	FSM	ENSG00000244355.8	ENST00000375825.8	525	3	8	115	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	31715340	False	NA	NA	False	NA	NA	NA	31715355	31717804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31715411_31715501_31715625_31717580
transcript_121076.known	chr6	+	493	2	FSM	ENSG00000244355.8	ENST00000479334.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGAGTAGGAGTAGAGAAG	31715340	False	NA	NA	False	NA	NA	NA	31715355	31717804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31715625_31717580
transcript_121077.known	chr6	-	1977	20	FSM	ENSG00000204427.12	ENST00000395952.8	1977	20	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_17	19.2136262819658	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAATTGTATAACTTCTC	NA	False	NA	1	True	AATAAA	-22	NA	31703324	31686954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31703149
transcript_121078.known	chr6	-	2260	20	FSM	ENSG00000204427.12	ENST00000492084.5	2260	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	54.8118918694174	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAGGCTAATTGTATAACT	-31702937	False	NA	-3	True	AATAAA	-18	NA	31703073	31686958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31701273_31701341_31702073_31702131_31702611
transcript_121079.known	chr6	-	1892	19	FSM	ENSG00000204427.12	ENST00000495769.5	1892	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_17	55.2984048616858	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATTAATAAAAAGGTAT	NA	False	NA	-33	True	NA	NA	NA	31703340	31686988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31687296_31687497_31687545_31687641_31687741_31687823_31687901_31688040_31688104_31688248_31688306_31688722_31688787_31689014_31689120_31689580_31689705_31690077_31690128_31690538_31690603_31691578_31691681_31691803_31691919_31693026_31693150_31693358_31693433_31696947_31697034_31700941_31701029_31702073_31702131_31703149
transcript_121080.known	chr6	+	2721	25	FSM	ENSG00000204410.16	ENST00000375750.9	2721	25	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_8	18.4593679168299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTGTTTCTTTAGTCTC	31738284	True	NA	NA	False	AATAAA	-17	NA	31740004	31762676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107_31743171_31743903_31744026_31744189_31744300_31744545_31744582_31745236_31745320_31747386_31747433_31753300_31753440_31753566_31753630_31758164_31758294_31758547_31758621_31758765_31758876_31759096_31759178_31759424_31759513_31759785_31759976_31760089_31760217_31760689_31760840_31761187_31761263_31761471_31761616_31761817_31761956_31762111_31762186_31762419
transcript_121085.known	chr6	-	1261	7	FSM	ENSG00000213722.10	ENST00000436437.2	1261	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	190.788422662965	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31728559	False	103	-6	True	AATAAA	-20	NA	31729501	31727037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729361
transcript_121086.known	chr6	-	1235	7	FSM	ENSG00000213722.10	ENST00000416410.6	1235	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	188.589206713663	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31728854	False	126	-6	True	AATAAA	-20	NA	31729796	31727037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864_31729226_31729682
transcript_121093.known	chr6	-	937	6	FSM	ENSG00000213722.10	ENST00000480913.5	937	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	196.199286441108	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729285	False	NA	-6	True	AATAAA	-20	NA	31730227	31727037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31730050
transcript_121101.known	chr6	+	796	5	FSM	ENSG00000204410.16	ENST00000463094.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.47722557505166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAAAGGCACTGCCTCAG	31738284	True	NA	NA	False	NA	NA	NA	31740004	31743480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31740063_31740453_31740614_31741162_31741287_31742876_31742958_31743107
transcript_121102.known	chr6	+	916	5	FSM	ENSG00000228727.9	ENST00000415669.3	916	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.4253297309965	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTGGTTTGTTTCTCAT	NA	False	NA	27	True	AATAAA	-38	NA	31762995	31764851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31763169_31763414_31763556_31764063_31764160_31764265_31764356_31764435
transcript_121104.known	chr6	-	898	5	FSM	ENSG00000213722.10	ENST00000483792.1	898	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	252.731576974465	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGTGACTGGTGTCT	-31729320	False	NA	-6	True	AATAAA	-20	NA	31730262	31727037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728645_31728746_31730050
transcript_121118.known	chr6	-	1254	6	FSM	ENSG00000213719.8	ENST00000375784.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	3	2642	junction_5	198.062010491664	15076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735625	True	NA	-5	True	AATAAA	-33	NA	31736567	31730580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261
transcript_121119.known	chr6	-	1193	6	FSM	ENSG00000213722.10	ENST00000375789.7	1193	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_4	37.5691362690174	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGCTGTGACTGGTGT	-31728357	False	NA	-8	True	AATAAA	-18	NA	31729299	31727039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31727354_31727542_31727693_31728172_31728293_31728450_31728525_31728645_31728746_31728864
transcript_121120.known	chr6	-	1127	7	FSM	ENSG00000213719.8	ENST00000375779.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	1062.05765955631	5470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	-31735630	True	NA	-5	True	AATAAA	-33	NA	31736572	31730580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736413_31736544
transcript_121121.known	chr6	-	1098	7	FSM	ENSG00000213719.8	ENST00000616760.1	1098	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	1033.79188750283	8677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGGATTTAAAGTGTGG	-31735603	True	NA	-7	True	AATAAA	-31	NA	31736545	31730582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31736482
transcript_121122.known	chr6	-	1197	8	FSM	ENSG00000213719.8	ENST00000395892.5	1197	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1288.56946468016	5146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATTTAAAGTGTGGGC	NA	False	NA	-5	True	AATAAA	-33	NA	31739763	31730580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31731004_31732216_31732399_31733565_31733673_31733835_31733962_31734153_31734264_31736261_31736351_31739263_31739389_31739728
transcript_121124.known	chr6	-	4111	30	FSM	ENSG00000204394.13	ENST00000375663.8	4111	30	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_11	168.215456936744	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTCGTCTGTGGTG	-31795731	False	NA	-1	True	AATAAA	-17	NA	31795752	31777517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31777663_31778966_31779293_31779424_31779537_31779607_31779815_31779997_31780154_31780440_31780569_31780704_31780784_31780869_31780939_31781018_31781124_31781480_31781607_31781690_31781762_31781846_31781953_31782086_31782178_31782284_31782444_31782529_31782634_31782720_31782846_31783095_31783187_31784213_31784309_31784393_31784503_31784594_31784715_31785245_31785328_31785568_31785734_31791609_31791738_31791870_31791972_31792216_31792302_31792391_31792517_31792756_31792896_31792985_31793121_31794830_31795251_31795545
transcript_121131.known	chr6	-	767	5	FSM	ENSG00000204392.11	ENST00000493387.5	767	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	394.13853846078	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805742	False	NA	-6	True	AATAAA	-15	NA	31806660	31797395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806122_31806518
transcript_121133.known	chr6	-	820	5	FSM	ENSG00000204392.11	ENST00000491421.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	394.13853846078	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805741	False	NA	-6	True	AATAAA	-15	NA	31806659	31797395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806485
transcript_121136.known	chr6	-	858	5	FSM	ENSG00000204392.11	ENST00000375661.6	858	5	0	0	0	0	multi-exon	FALSE	canonical	3	886	junction_4	17.1810215063017	4747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	31806966	31797395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806074_31806143_31806754
transcript_121138.known	chr6	-	641	4	FSM	ENSG00000204392.11	ENST00000470083.5	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	413.730185829686	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805899	True	NA	-6	True	AATAAA	-15	NA	31806817	31797395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31798476_31798508_31806754
transcript_121141.known	chr6	-	713	4	FSM	ENSG00000204392.11	ENST00000470086.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	407.436157234753	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	-31805934	True	NA	-6	True	AATAAA	-15	NA	31806852	31797395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31797989_31798050_31806074_31806143_31806754
transcript_121147.known	chr6	-	767	3	FSM	ENSG00000204392.11	ENST00000477182.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	443	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTGGTTCTGTTA	NA	False	NA	-6	True	AATAAA	-15	NA	31806966	31797395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31797883_31806074_31806143_31806754
transcript_121148.known	chr6	+	2400	1	FSM	ENSG00000204389.10	ENST00000375651.7	2400	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	351	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGCCTTTTATTCCTTT	NA	False	NA	14	True	AATAAA	-14	NA	31815542	31817942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31815500_31817900
transcript_121159.known	chr6	+	602	4	FSM	ENSG00000204387.14	ENST00000375641.6	602	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	298.056295950204	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834626	31839761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31834769_31835410_31835452_31837235_31837436_31839542
transcript_121160.known	chr6	+	610	4	FSM	ENSG00000204387.14	ENST00000375635.6	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	289.443527403111	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835058_31835410_31835452_31837235_31837436_31839542
transcript_121165.known	chr6	+	712	3	FSM	ENSG00000204387.14	ENST00000648677.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	366	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31837235_31837436_31839542
transcript_121166.known	chr6	+	2517	1	FSM	ENSG00000204388.7	ENST00000375650.5	2517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCTGTTAATATGTG	NA	False	NA	12	True	AATAAA	-13	NA	31827737	31830254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31827700_31830300
transcript_121167.known	chr6	+	847	5	FSM	ENSG00000204387.14	ENST00000375638.7	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	246.041028082716	2430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	NA	False	NA	95	True	AATAAA	-16	NA	31834907	31839761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31835410_31835452_31836423_31836518_31837235_31837436_31839542
transcript_121168.known	chr6	+	748	4	FSM	ENSG00000204387.14	ENST00000614363.4	748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	299.246089735893	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGTTTGGTCTCAGAACA	31834027	True	NA	100	True	AATAAA	-21	NA	31834921	31839766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31835410_31835456_31837235_31837436_31839542
transcript_121169.known	chr6	+	586	3	FSM	ENSG00000204387.14	ENST00000375633.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	218.5	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGGTTTGGTCTCAGAA	31835238	False	NA	98	True	AATAAA	-19	NA	31835287	31839764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835452_31837235_31837436_31839542
transcript_121170.known	chr6	+	952	5	FSM	ENSG00000204387.14	ENST00000395789.5	952	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	277.892402738902	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACGTGGTTTGGTCTCA	31834037	False	NA	95	True	AATAAA	-16	NA	31834931	31839761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31835201_31835410_31835452_31836294_31836518_31837235_31837436_31839542
transcript_121172.known	chr6	-	2585	21	FSM	ENSG00000204385.13	ENST00000229729.11	2585	21	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	3.04795013082563	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTCATTCTCTCCA	-31878936	False	NA	-19	True	ATTAAA	-23	NA	31878997	31863191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31863749_31864651_31864737_31864815_31864911_31865009_31865081_31865314_31865389_31865497_31865602_31865689_31865785_31865872_31866127_31869154_31869258_31869544_31869638_31870602_31870703_31870811_31871048_31871313_31871398_31871473_31871562_31874459_31874521_31874720_31874847_31874928_31875029_31875851_31875931_31876055_31876130_31877033_31877083_31878940
transcript_121175.known	chr6	-	3940	26	FSM	ENSG00000204371.11	ENST00000480912.5	3940	26	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_25	303.626549563769	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGATTTTTGTGTTGGGG	-31896460	False	NA	NA	False	AATAAA	-20	NA	31896504	31879758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31880265_31880672_31880849_31881013_31881093_31882698_31882786_31882893_31883010_31883361_31883440_31883805_31883951_31884391_31884560_31884644_31884800_31884890_31885017_31886580_31886683_31886774_31886898_31886994_31887102_31887576_31887660_31887778_31887962_31888040_31888277_31888362_31888507_31888598_31888748_31888968_31889071_31889227_31889343_31889467_31889603_31892406_31892563_31892693_31892735_31892825_31892911_31893361_31893663_31896262
transcript_121182.known	chr6	-	1454	4	FSM	ENSG00000204371.11	ENST00000465429.1	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_3	112.529502304457	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAAGAT	-31892680	True	NA	NA	False	NA	NA	NA	31897687	31895400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31896517_31896605_31896825_31896922_31896990_31897635
transcript_121183.nnic	chr6	+	377	3	NNC	ENSG00000166278.15	novel	1609	13	NA	NA	-39	-30086	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTGCCAATCACTTGTAC	NA	False	NA	NA	False	AATAGA	-18	NA	31897745	31898808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_31897943_31898241_31898276_31898662
transcript_121189.known	chr6	-	1445	11	FSM	ENSG00000204356.14	ENST00000375429.8	1445	11	0	0	0	0	multi-exon	TRUE	canonical	3	566	junction_10	98.0909781784237	3236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTTGTCGCAGCTGTTTT	-31950520	True	NA	-2	True	NA	NA	NA	31958971	31952086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31952399_31953728_31953832_31954079_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_121190.known	chr6	-	1543	10	FSM	ENSG00000204356.14	ENST00000481121.5	1543	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_9	97.2945128063357	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCCCTCAGCCTCTG	-31950511	True	NA	-27	True	AGTAAA	-20	NA	31958962	31952227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31952399_31953728_31954135_31954297_31954443_31954554_31954893_31955058_31955097_31955218_31955294_31956692_31956839_31956940_31957011_31958371_31958455_31958891
transcript_121192.known	chr6	+	3795	28	FSM	ENSG00000204351.12	ENST00000375394.7	3795	28	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	21.354220741676	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTTGTGTGCTTGAGT	31956291	True	NA	7	True	GATAAA	-9	NA	31959174	31969751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31959215_31959296_31959401_31960009_31960120_31960219_31960338_31960431_31960547_31960665_31960741_31961040_31961095_31961195_31961387_31961546_31961676_31961908_31962055_31962438_31962586_31962713_31962799_31962984_31963092_31963412_31963560_31963636_31963734_31963912_31964126_31964231_31964343_31965782_31966014_31966708_31966847_31967003_31967142_31967272_31967378_31967714_31967863_31967955_31968083_31968327_31968539_31968685_31968797_31968870_31969090_31969279_31969421_31969514
transcript_121199.known	chr6	-	1115	7	FSM	ENSG00000204348.10	ENST00000474587.1	1115	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.1646525312078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATATGGTATGTGGAA	NA	False	NA	NA	False	NA	NA	NA	31972098	31969947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971140_31971319_31971582_31971928
transcript_1212.nnic	chr1	+	624	3	NNC	ENSG00000237058.1	novel	373	2	NA	NA	-3849	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTGTGGTTTCCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	2628718	2636620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_2628904_2632501_2632676_2636355
transcript_121201.known	chr6	-	1346	7	FSM	ENSG00000204348.10	ENST00000480240.5	1346	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	45.9435039538296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCCCCCAAGACTCCCTC	NA	False	NA	-97	True	NA	NA	NA	31972136	31969906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970753_31970911_31971148_31971319_31971726_31971928
transcript_121204.known	chr6	-	1469	7	FSM	ENSG00000204348.10	ENST00000337523.10	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	26.2805377925694	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTCTCGCTGTCTTCTT	NA	False	NA	-5	True	AATAAA	-16	NA	31972138	31969814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971682_31971928
transcript_121205.known	chr6	-	1667	7	FSM	ENSG00000204348.10	ENST00000375349.7	1667	7	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	39.4067112163511	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCGCTGTCTTCTTAG	NA	False	NA	-3	True	AATAAA	-18	NA	31972290	31969812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_31970025_31970108_31970204_31970342_31970479_31970605_31970826_31970911_31971148_31971319_31971726_31971928
transcript_121206.known	chr6	+	1039	6	FSM	ENSG00000204344.16	ENST00000483801.6	1039	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	33.2686038180144	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCTCTGCCTGTGATAT	31972014	True	NA	NA	False	NA	NA	NA	31972380	31981429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972512_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_121209.known	chr6	+	1128	6	FSM	ENSG00000204344.16	ENST00000491861.5	1128	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	9.17823512446701	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972188	False	NA	NA	False	AATAAA	-17	NA	31972554	31981446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972758_31978902_31978999_31979413_31979554_31980450_31980549_31980653_31980802_31981003
transcript_121225.nic	chr6	+	991	5	NIC	ENSG00000204344.16	novel	1128	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	36.2422405488402	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGGATGTCCTTTA	31972185	False	NA	NA	False	AATAAA	-17	NA	31972551	31981446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_31972758_31978902_31978999_31980450_31980549_31980653_31980802_31981003
transcript_121235.known	chr6	+	543	3	FSM	ENSG00000204344.16	ENST00000463823.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	32.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGCCTATCTTACCTG	31972007	True	NA	NA	False	AATAAA	-32	NA	31972373	31979722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972512_31978902_31978999_31979413
transcript_121236.known	chr6	+	725	3	FSM	ENSG00000204344.16	ENST00000484540.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAGGAGCTGGGATACC	31972211	False	NA	NA	False	NA	NA	NA	31972577	31979862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972758_31978902_31978999_31979413
transcript_121239.known	chr6	+	517	5	FSM	ENSG00000204344.16	ENST00000466336.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.1753010863923	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCGGGCGCCTGTCGTGGT	31972030	True	NA	NA	False	NA	NA	NA	31972396	31980724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_31972512_31972620_31972758_31978902_31978999_31980450_31980549_31980653
transcript_121240.known	chr6	-	2626	18	FSM	ENSG00000213676.13	ENST00000375203.8	2626	18	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	8.08689828521619	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTGCCTTCCTGGCT	-32127983	False	NA	-1	True	AATAAA	-24	NA	32128246	32115263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117108_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_121241.known	chr6	-	2532	18	FSM	ENSG00000213676.13	ENST00000453203.2	2532	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	18.3070693702552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGGGGTGGGGGGGAGT	-32126894	True	NA	-89	True	NA	NA	NA	32128217	32115351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32115969_32116479_32116565_32116703_32116816_32117036_32117131_32117322_32117405_32117586_32117695_32117858_32118039_32118774_32118867_32118955_32119142_32119823_32119958_32120770_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_121243.known	chr6	-	1176	8	FSM	ENSG00000213676.13	ENST00000495579.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18754509363078	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CCAAAAAATAAAAATAAAAA	-32126899	True	NA	NA	False	AAAAAG	-13	NA	32128222	32120441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32120903_32120988_32121125_32121262_32121349_32126116_32126253_32127102_32127195_32127441_32127521_32127670_32127751_32128116
transcript_121246.known	chr6	-	1342	2	FSM	ENSG00000204315.4	ENST00000375156.4	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACTTGTGAATTGTGG	NA	False	NA	-12	True	ATTAAA	-20	NA	32130288	32128706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32129855_32130094
transcript_121249.nic	chr6	+	1993	10	NIC	ENSG00000221988.13	novel	2111	10	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	44.2518047340696	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	32153298	True	NA	15	True	AATAAA	-15	NA	32153494	32163675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_32153637_32154195_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_12125.nnic	chr1	-	678	4	NNC	ENSG00000215845.11	novel	567	4	NA	NA	-137	0	at_least_one_novel_splicesite	FALSE	canonical	3	138	junction_3	685.733346295936	1036	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161035667	False	NA	-13	True	AATAAA	-16	NA	161039114	161037630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_161037827_161037912_161038076_161038550_161038635_161038879
transcript_121251.known	chr6	+	1759	9	FSM	ENSG00000221988.13	ENST00000361568.6	1759	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	38.7183338355358	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153326	True	NA	18	True	AATAAA	-18	NA	32153522	32163678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32153637_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_121253.known	chr6	+	1754	9	FSM	ENSG00000221988.13	ENST00000375143.6	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	41.2293508922952	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGCTCATTTCCAGG	32153941	False	NA	18	True	AATAAA	-18	NA	32154137	32163678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32154247_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_12126.known	chr1	-	567	4	FSM	ENSG00000215845.11	ENST00000423014.3	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_3	246.841379567257	7645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019815	True	NA	-13	True	AATAAA	-16	NA	161038964	161037630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038674_161038879
transcript_121268.known	chr6	-	2196	7	FSM	ENSG00000204310.13	ENST00000375107.8	2196	7	0	0	0	0	multi-exon	TRUE	canonical	3	237	junction_6	40.3680979652663	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32175948	False	NA	-30	True	AATAAA	-13	NA	32176084	32168211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32175813
transcript_121269.known	chr6	-	2496	7	FSM	ENSG00000204310.13	ENST00000395499.5	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	111.211010645929	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177061	False	NA	-30	True	AATAAA	-13	NA	32177080	32168211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32176509
transcript_121270.known	chr6	-	2017	7	FSM	ENSG00000204310.13	ENST00000375104.6	2017	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	111.952370824978	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177306	False	NA	-30	True	AATAAA	-13	NA	32177325	32168211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32177233
transcript_121271.known	chr6	-	2021	7	FSM	ENSG00000204310.13	ENST00000336984.6	2021	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	124.93387139692	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177960	True	NA	-30	True	AATAAA	-13	NA	32178096	32168211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32170424_32170601_32170936_32171071_32171296_32171506_32178000
transcript_12128.known	chr1	-	574	4	FSM	ENSG00000215845.11	ENST00000368023.7	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	725.545924727642	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019801	True	NA	-13	True	AATAAA	-16	NA	161038950	161037630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038550_161038695_161038879
transcript_121280.known	chr6	-	2448	5	FSM	ENSG00000204310.13	ENST00000490711.5	2448	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	159.725545859139	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTTGGTGGTTGCA	-32177323	False	NA	-30	True	AATAAA	-13	NA	32177342	32168211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32169449_32169965_32170039_32170164_32170261_32171296_32171506_32176509
transcript_121286.known	chr6	-	2782	3	FSM	ENSG00000204314.12	ENST00000495191.5	2782	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCCGCAATTCCAAAGAC	-32151903	False	NA	-8	True	ATTAAA	-18	NA	32151923	32148358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32149399_32149536_32149723_32150367
transcript_121290.known	chr6	-	567	3	FSM	ENSG00000284954.1	ENST00000485392.5	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32154313	False	NA	-4	True	AATAAA	-19	NA	32154333	32152801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153173_32153736_32153837_32154237
transcript_121291.known	chr6	-	548	3	FSM	ENSG00000284954.1	ENST00000498575.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32154345	True	NA	-4	True	AATAAA	-19	NA	32154365	32152801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153173_32153736_32153837_32154288
transcript_121292.known	chr6	-	504	3	FSM	ENSG00000284954.1	ENST00000475826.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCGAAACCCCCAGGCGC	-32154306	False	NA	NA	False	NA	NA	NA	32154326	32153384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153660_32153765_32153837_32154168
transcript_121293.known	chr6	-	493	3	FSM	ENSG00000284954.1	ENST00000494332.5	493	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCGACACCCTAGTGCCTCA	-32154319	False	NA	NA	False	NA	NA	NA	32154339	32153339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153660_32153765_32153837_32154237
transcript_121296.known	chr6	-	543	2	FSM	ENSG00000284954.1	ENST00000497552.5	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCGACTCAGGAGC	-32153888	False	NA	-4	True	AATAAA	-19	NA	32153908	32152801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32153173_32153736
transcript_121299.known	chr6	-	1361	2	FSM	ENSG00000204314.12	ENST00000467780.5	1361	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCCCGCAATTCCAAAGAC	-32149837	False	NA	-8	True	ATTAAA	-18	NA	32149857	32148358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32149399_32149536
transcript_1213.known	chr1	+	373	2	FSM	ENSG00000237058.1	ENST00000427302.1	373	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTGTGGTTTCCATC	NA	False	NA	NA	False	ATTAAA	-16	NA	2632567	2636620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_2632676_2636355
transcript_121300.known	chr6	+	1906	9	FSM	ENSG00000221988.13	ENST00000324816.11	1906	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	30.4127851404635	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGACTTGGCTCATTTCC	32153944	False	NA	15	True	AATAAA	-15	NA	32154140	32163675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32154405_32154586_32154778_32155029_32155184_32155687_32155784_32155870_32155979_32157636_32157721_32157839_32157925_32162567_32162623_32162806
transcript_121302.known	chr6	+	1117	6	FSM	ENSG00000204308.8	ENST00000375094.4	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	1789	junction_1	196.574057291393	10672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGGGATCTCTTCCCAA	NA	False	NA	13	True	AATAAA	-15	NA	32178404	32180793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32178652_32179540_32179560_32179650_32179764_32179876_32179932_32180008_32180127_32180228
transcript_121327.known	chr6	+	357	3	FSM	ENSG00000204308.8	ENST00000487940.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	1789	junction_1	133	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGTGTTGCTTAGGGAAG	NA	False	NA	NA	False	NA	NA	NA	32178436	32179773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32178652_32179540_32179560_32179650
transcript_121328.known	chr6	-	1597	10	FSM	ENSG00000204305.16	ENST00000484849.5	1597	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	5.39775902288494	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGTGTGTCTGTGTGTGT	-32184205	False	NA	-5	True	ATTAAA	-18	NA	32184246	32180967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32181240_32181350_32181478_32181605_32181633_32182246_32182389_32182567_32182699_32182840_32183024_32183113_32183202_32183323_32183389_32183554_32183751_32183880
transcript_121329.known	chr6	-	3229	9	FSM	ENSG00000204304.12	ENST00000375050.6	3229	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	11.7785557264038	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-32190178	False	NA	-4	True	AATAAA	-22	NA	32190202	32184732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32186475_32186603_32186691_32186812_32186902_32187241_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
transcript_121334.known	chr6	-	1320	6	FSM	ENSG00000204304.12	ENST00000478678.5	1320	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	9.89141041510259	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGAGAGTTGTGGTTCA	-32189918	False	NA	NA	False	NA	NA	NA	32189942	32186972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32187396_32187646_32187783_32187965_32188157_32188256_32188505_32188722_32188797_32189694
transcript_121336.known	chr6	-	662	2	FSM	ENSG00000273333.2	ENST00000559458.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTTGAGAATTTTTTTC	-32185841	False	NA	-4	True	AATAAA	-22	NA	32185882	32184732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32184836_32185323
transcript_121337.known	chr6	-	1417	4	FSM	ENSG00000213654.10	ENST00000472768.5	1417	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	35.3647658929996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192861	False	NA	0	True	AATAAA	-18	NA	32192885	32190765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191871_32192147_32192251_32192471
transcript_121338.known	chr6	-	1213	4	FSM	ENSG00000213654.10	ENST00000375040.8	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	3.39934634239519	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192619	False	NA	0	True	AATAAA	-18	NA	32192643	32190765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192251_32192471
transcript_121341.known	chr6	-	1460	4	FSM	ENSG00000213654.10	ENST00000487761.5	1460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.6147209217982	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGACTGGTATCTGGGG	-32192844	False	NA	0	True	AATAAA	-18	NA	32192868	32190765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32191504_32191708_32191909_32192147_32192273_32192471
transcript_121347.nnic	chr6	+	1058	4	NNC	ENSG00000225914.4	novel	1252	5	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATACATAATTTTTCGC	NA	False	NA	NA	False	AATAAA	-18	NA	32254817	32391951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_32255415_32365779_32365840_32390691_32390754_32391612
transcript_121349.nic	chr6	+	1462	3	NIC	ENSG00000225914.4	novel	1252	5	NA	NA	191	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATACATAATTTTTCGC	NA	False	NA	NA	False	AATAAA	-18	NA	32254831	32391951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_32255415_32390213_32390754_32391612
transcript_121350.known	chr6	+	1235	5	FSM	ENSG00000204287.14	ENST00000395388.7	1235	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.06155281280883	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGTTTAAGCCAGT	NA	False	NA	25	True	AATAAA	-25	NA	32439886	32445046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32440033_32442447_32442694_32443184_32443467_32443755_32443922_32444651
transcript_121357.nnic	chr6	-	1178	6	NNC	ENSG00000196126.11	novel	1229	6	NA	NA	5181	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.59090282131363	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	NA	False	NA	-27	True	ATTAAA	-24	NA	32584667	32578768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32584512
transcript_121359.known	chr6	-	1229	6	FSM	ENSG00000196126.11	ENST00000360004.5	1229	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.59090282131363	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCTGGTCCATTTGGC	NA	False	NA	-27	True	ATTAAA	-24	NA	32589848	32578768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32579105_32580246_32580271_32580745_32580857_32581556_32581839_32584108_32584379_32589642
transcript_121362.known	chr6	-	1642	5	FSM	ENSG00000179344.17	ENST00000434651.7	1605	5	-37	0	-10	0	multi-exon	FALSE	canonical	0	0	junction_1	4.60298815988049	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATAGAAGCCCAAATATAT	NA	False	NA	-2	True	AATAAA	-22	NA	32666694	32659466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32660250_32661346_32661458_32661966_32662249_32664797_32665068_32666498
transcript_121365.nic	chr6	-	1365	2	ISM	ENSG00000179344.17	ENST00000484729.2	783	5	-85	3821	-39	-3821	5prime_fragment	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGTTGTAAGGCAGAGTT	NA	False	NA	NA	False	AATAAA	-14	NA	32666723	32663927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_32665068_32666498
transcript_121369.known	chr6	-	5643	12	FSM	ENSG00000204267.17	ENST00000374897.4	5643	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	0.88139633771206	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGAAGTTCCATATT	-32838359	True	NA	-4	True	ATTAAA	-25	NA	32838739	32825414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32829035_32829399_32829537_32829929_32830090_32830266_32830441_32830617_32830807_32832332_32832462_32832626_32832825_32835153_32835360_32835642_32835774_32837536_32837652_32837740_32838238_32838652
transcript_12137.known	chr1	-	626	3	FSM	ENSG00000215845.11	ENST00000318289.14	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	139	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019788	True	NA	-13	True	AATAAA	-16	NA	161038937	161037630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161038076_161038550_161038674_161038879
transcript_121371.known	chr6	-	1326	6	FSM	ENSG00000241106.8	ENST00000438763.7	1326	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAGTGAATTATTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	32817002	32812762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32813252_32813439_32813472_32813722_32813834_32814319_32814602_32815043_32815314_32816860
transcript_121372.known	chr6	-	2685	11	FSM	ENSG00000168394.12	ENST00000354258.5	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	13.2453765518388	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGTTTCTTATGTTTCC	NA	False	NA	-9	True	AATAAA	-15	NA	32853704	32845208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32845786_32847067_32847205_32847512_32847676_32847918_32848093_32848651_32848841_32848989_32849119_32850319_32850518_32850943_32851150_32852108_32852240_32852387_32852503_32853038
transcript_121378.known	chr6	+	1017	6	FSM	ENSG00000240065.8	ENST00000374859.3	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.17612260356422	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGGTGATGGGACTCTTT	32854119	False	NA	NA	False	NA	NA	NA	32854191	32859851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32854290_32856137_32856206_32857262_32857395_32858004_32858135_32858363_32858506_32859404
transcript_121382.known	chr6	-	1124	6	FSM	ENSG00000204264.12	ENST00000374882.8	1124	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	34.9937137211814	916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	-32843766	False	NA	NA	False	AATAAA	-19	NA	32844047	32840716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32843849
transcript_121392.known	chr6	-	1327	6	FSM	ENSG00000204264.12	ENST00000374881.3	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	33.8502584923661	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTTGTGGCTGAAT	NA	False	NA	NA	False	AATAAA	-19	NA	32844679	32840716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32841048_32841530_32841736_32842133_32842264_32842671_32842784_32842941_32843090_32844278
transcript_121393.known	chr6	+	2676	3	FSM	ENSG00000240065.8	ENST00000464863.1	2676	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAACTGGGCATAGTGGT	32854075	False	NA	NA	False	AATAAA	-17	NA	32854147	32858900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32854290_32856137_32858135_32858363
transcript_121394.known	chr6	+	1338	2	FSM	ENSG00000204261.9	ENST00000415067.2	1338	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTCTTTTCCTTATGTT	NA	False	NA	6	True	AATAAA	-13	NA	32844100	32846493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32844275_32845329
transcript_121395.nnic	chr6	+	1606	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-470	0	-470	0	multi-exon	FALSE	canonical	3	86	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCACAAAGAGTGAACCCT	NA	False	NA	13	True	AATAAA	-19	NA	32894289	32901788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32895027_32900919
transcript_121396.nnic	chr6	+	1406	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-32	-238	-32	238	multi-exon	FALSE	canonical	3	86	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAATACTATGATTGCCT	NA	False	NA	NA	False	TATAAA	-23	NA	32894727	32902026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32895027_32900919
transcript_121397.nnic	chr6	+	1978	2	FSM	ENSG00000289047.1	ENST00000685247.1	1136	2	-470	-372	-470	372	multi-exon	FALSE	canonical	3	86	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGTTACCTTGAATTTAT	NA	False	NA	NA	False	ATTAAA	-15	NA	32894289	32902160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32895027_32900919
transcript_121398.known	chr6	-	1348	6	FSM	ENSG00000242574.9	ENST00000418107.3	1348	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	2.28035085019828	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTTTTCCATGTCTTC	NA	False	NA	-7	True	AATAAA	-13	NA	32941028	32934635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32934988_32935341_32935378_32935535_32935653_32937171_32937457_32938683_32938966_32940752
transcript_121407.nnic	chr6	-	967	5	NNC	ENSG00000204257.15	novel	1093	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	31.0433165109658	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	NA	False	NA	-5	True	AATAAA	-14	NA	32953108	32948617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950667_32952948
transcript_121409.nic	chr6	-	1070	5	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	29.7699512932084	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32969105	False	NA	-5	True	AATAAA	-14	NA	32969127	32948617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32969001
transcript_12141.known	chr1	-	813	2	FSM	ENSG00000215845.11	ENST00000486084.1	813	2	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCTAGCTGGGAGGTGAT	-161019767	True	NA	NA	False	NA	NA	NA	161038916	161037897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161038674_161038879
transcript_121410.nnic	chr6	-	1233	4	NIC	ENSG00000242574.9	novel	1348	6	NA	NA	-34	-3	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	3.09120616516523	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCCATGTCTTCTTCC	NA	False	NA	-3	True	AATAAA	-17	NA	32941062	32934631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32934988_32937171_32937457_32938683_32938966_32940752
transcript_121413.known	chr6	-	777	4	FSM	ENSG00000204257.15	ENST00000395305.7	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	33.9050963065371	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	-32953047	True	NA	0	True	AATAAA	-19	NA	32953061	32948612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32952948
transcript_121414.known	chr6	-	806	4	FSM	ENSG00000204257.15	ENST00000464392.1	806	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.311313893551	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCTCTGGGACATC	-32968422	False	NA	NA	False	NA	NA	NA	32968444	32948770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32968144
transcript_121415.nnic	chr6	-	785	4	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	34.3737626039914	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32969105	False	NA	-5	True	AATAAA	-14	NA	32969127	32948617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32948869_32949270_32949400_32949610_32949890_32969001
transcript_121419.nnic	chr6	-	493	3	NIC	ENSG00000204257.15	novel	1093	5	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	35	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	-32969092	True	NA	-5	True	AATAAA	-14	NA	32969114	32948617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_32948869_32949270_32949400_32969001
transcript_12142.known	chr1	-	457	3	FSM	ENSG00000215845.11	ENST00000368024.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	518	junction_2	605	4713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161019828	True	NA	-13	True	AATAAA	-16	NA	161038977	161037630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038879
transcript_121420.known	chr6	-	1093	5	FSM	ENSG00000204257.15	ENST00000374843.9	1093	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.09815545882523	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCAGTGTGGCTTCTTTCT	NA	False	NA	-5	True	AATAAA	-14	NA	32953097	32948617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949890_32950518_32950804_32952948
transcript_121421.known	chr6	-	1007	5	FSM	ENSG00000204257.15	ENST00000395303.7	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	26.0240273593462	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949270_32949400_32949610_32949788_32950518_32950804_32952948
transcript_121422.known	chr6	-	1735	4	FSM	ENSG00000204257.15	ENST00000477541.1	1735	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	31.2018517968975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTCTTTCTTAACT	NA	False	NA	0	True	AATAAA	-19	NA	32953108	32948612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_32948869_32949273_32949400_32949610_32950804_32952948
transcript_121423.known	chr6	+	2338	9	FSM	ENSG00000204256.14	ENST00000607833.5	2338	9	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	38.5176501749523	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAAAGAAGAAACGGAA	32972162	False	NA	34	True	NA	NA	NA	32972216	32978203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_32972928_32974461_32974766_32975383_32975522_32976030_32976170_32976249_32976465_32976561_32976937_32977441_32977571_32977756_32978006_32978125
transcript_121424.known	chr6	-	3464	5	FSM	ENSG00000204252.14	ENST00000229829.7	3464	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	6.98212002188447	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGCTTTTTTTTTAC	-33009430	True	NA	NA	False	ATTAAA	-21	NA	33009591	33004181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33006842_33007079_33007216_33007310_33007593_33008012_33008262_33009454
transcript_12143.known	chr1	-	591	2	FSM	ENSG00000215845.11	ENST00000462952.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	1728	junction_1	0	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTGGAAGCACTTAATGT	-161034860	False	NA	-13	True	AATAAA	-16	NA	161038307	161037630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912
transcript_121430.known	chr6	+	3991	6	FSM	ENSG00000223865.11	ENST00000418931.7	3991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.4172381772117	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATGGAGGACCTACTG	NA	False	NA	NA	False	AATAAA	-24	NA	33075989	33089696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33076142_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_121431.nic	chr6	+	1108	6	NIC	ENSG00000223865.11	novel	1361	5	NA	NA	-47	-432	combination_of_known_junctions	FALSE	canonical	3	58	junction_1	26.3696795581592	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTGTTTGTTTTCCTT	NA	False	NA	15	True	NA	NA	NA	33080338	33086769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_33080535_33080671_33080936_33084949_33085232_33085778_33085890_33086218_33086243_33086538
transcript_121435.known	chr6	-	1704	6	FSM	ENSG00000231389.8	ENST00000419277.5	1704	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	11.3595774569303	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTGCAATTTTTACCAG	-33080631	True	NA	NA	False	AATAAA	-19	NA	33080710	33064568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33073470_33073670_33080679
transcript_12144.known	chr1	-	477	3	FSM	ENSG00000215845.11	ENST00000466967.1	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	1402	junction_2	163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGCAACTCCTTATAGTG	-161035282	False	NA	-74	True	NA	NA	NA	161038729	161037691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161037827_161037912_161038076_161038550
transcript_121441.nic	chr6	-	1364	5	NIC	ENSG00000231389.8	novel	1704	6	NA	NA	-241	-9	combination_of_known_junctions	FALSE	canonical	3	9	junction_4	10.3047319227625	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCGGGGAGACTCTGAGTC	NA	False	NA	-9	True	AATAAA	-16	NA	33081016	33065015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_33065348_33068637_33068805_33069018_33069301_33069640_33069887_33080679
transcript_121442.known	chr6	+	688	4	FSM	ENSG00000223865.11	ENST00000428835.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	54.2913948573396	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAAGCCTGCAGGGTG	33079980	False	NA	NA	False	AAGAAA	-2	NA	33080486	33085889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33080535_33080688_33080936_33084949_33085232_33085778
transcript_121443.known	chr6	+	1361	5	FSM	ENSG00000223865.11	ENST00000416804.1	1361	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.0563414278775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTCTTTGTGTGCCAT	33080165	False	NA	NA	False	CATAAA	-21	NA	33080671	33087201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33080936_33084949_33085232_33085778_33085907_33086218_33086243_33086538
transcript_12146.known	chr1	-	1807	11	FSM	ENSG00000158773.14	ENST00000368021.7	1807	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	4.10365690573664	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	-161042530	True	NA	NA	False	GATAAA	-15	NA	161045977	161039250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_121460.known	chr6	+	1188	3	FSM	ENSG00000224557.8	ENST00000435074.6	1213	3	11	14	11	0	multi-exon	FALSE	canonical	1	2	junction_1	51	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33112450	33119149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33112616_33116956_33117221_33118390
transcript_121465.nnic	chr6	+	1147	3	FSM	ENSG00000224557.8	ENST00000684891.1	1085	3	-61	-1	-38	0	multi-exon	FALSE	canonical	3	26	junction_1	39	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33116617	33119149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33116742_33116956_33117221_33118390
transcript_12147.known	chr1	-	1092	11	FSM	ENSG00000158773.14	ENST00000473969.6	1092	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.53431361950185	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGGGATTCAGGGGCTT	-161042515	True	NA	NA	False	NA	NA	NA	161045962	161039919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161040010_161040201_161040331_161040575_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042585_161042671_161042832_161042883_161043267_161043361_161045857
transcript_121470.nnic	chr6	+	680	3	FSM	ENSG00000224557.8	ENST00000686632.1	1092	3	-38	450	-38	-82	multi-exon	FALSE	canonical	3	19	junction_1	42.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTGTAATACTGGTTTG	NA	False	NA	6	True	NA	NA	NA	33116617	33118699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33116742_33116973_33117221_33118390
transcript_121473.nnic	chr6	+	1130	3	FSM	ENSG00000224557.8	ENST00000686632.1	1092	3	-38	0	-38	0	multi-exon	FALSE	canonical	3	19	junction_1	42.5	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGATAGTAAAATTTTCA	NA	False	NA	9	True	AATAAA	-17	NA	33116617	33119149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33116742_33116973_33117221_33118390
transcript_12148.nic	chr1	-	2092	10	NIC	ENSG00000158773.14	novel	1807	11	NA	NA	-40	0	intron_retention	FALSE	canonical	2	4	junction_9	3.69517536629242	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTGTCTGTTTTTCTTCC	NA	False	NA	NA	False	GATAAA	-15	NA	161046017	161039250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_161040010_161040201_161040671_161040813_161040873_161041323_161041412_161041650_161041847_161042115_161042218_161042554_161042671_161042832_161042883_161043267_161043361_161045857
transcript_121483.nnic	chr6	-	1167	3	Antisense	novelGene_ENSG00000224557.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	14	junction_2	4	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCACGTGTGTCTGTGT	NA	False	NA	-3	True	ATTAAA	-20	NA	33124576	33117821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_33118580_33119618_33119766_33124314
transcript_121515.nnic	chr6	+	705	5	NNC	ENSG00000224557.8	novel	1092	3	NA	NA	-1	12126	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	13.8991906239176	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTATTTTATTTTGTG	NA	False	NA	11	True	AAGAAA	-13	NA	33116654	33141210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_33116742_33116973_33117221_33128633_33128745_33131244_33131415_33141120
transcript_121538.known	chr6	-	1194	5	FSM	ENSG00000204248.12	ENST00000395194.1	1194	5	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_2	5.24404424085076	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCTGGGAGCTGTGT	-33192127	False	NA	NA	False	AATAAA	-19	NA	33192454	33186444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33186819_33188361_33188525_33188977_33189189_33189319_33189470_33192158
transcript_121539.known	chr6	-	2885	10	FSM	ENSG00000204231.11	ENST00000374680.4	2885	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	15.9513148186739	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	NA	False	NA	-3	True	ATTAAA	-17	NA	33200665	33193587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195455_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_121540.known	chr6	-	2846	10	FSM	ENSG00000204231.11	ENST00000374685.8	2846	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	22.6459600408735	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGTGACTGTATGAGGA	NA	False	NA	-3	True	ATTAAA	-17	NA	33200614	33193587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33194830_33194944_33195051_33195362_33195467_33195569_33195703_33195906_33196037_33196433_33196607_33197761_33197942_33198307_33198465_33199168_33199417_33200241
transcript_121541.known	chr6	+	2153	8	FSM	ENSG00000112473.18	ENST00000374675.7	2153	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	69.8400504944063	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCTTTGTCTTTTTGG	33194251	True	NA	24	True	AATAAA	-24	NA	33200825	33204439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33200939_33201241_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_121543.known	chr6	+	2413	7	FSM	ENSG00000112473.18	ENST00000374677.8	2413	7	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	19.4543625498813	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGTCTTTGTCTTTTT	33194292	True	NA	22	True	AATAAA	-22	NA	33200866	33204437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33201657_33201744_33201914_33202071_33202126_33202262_33202428_33202559_33202701_33202909_33203107_33203540
transcript_121545.known	chr6	+	977	9	FSM	ENSG00000204228.4	ENST00000374662.4	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	15.1575063912241	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCGGCTCTTCTTGTGTC	33204191	True	NA	23	True	AATAAA	-23	NA	33204654	33206831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33204721_33204901_33205120_33205220_33205338_33205446_33205540_33205639_33205726_33205827_33205913_33206133_33206177_33206374_33206450_33206637
transcript_121554.known	chr6	+	1741	7	FSM	ENSG00000204227.5	ENST00000374656.5	1741	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	11.146748404804	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGTTCTGTGTGTCTG	33203672	True	NA	27	True	NA	NA	NA	33208499	33212716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33208645_33208764_33208901_33209625_33209787_33209914_33210131_33211157_33211548_33211728_33212003_33212297
transcript_121563.known	chr6	-	2936	20	FSM	ENSG00000223501.9	ENST00000445902.3	2936	20	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	23.4143692415706	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTATCCCATTTCCTTTC	-33271864	False	NA	-6	True	AATAAA	-18	NA	33271876	33250277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33250988_33251517_33251637_33251859_33251972_33263483_33263550_33263771_33263880_33264007_33264104_33264373_33264498_33264781_33264901_33266556_33266713_33267187_33267322_33267681_33267740_33267864_33267998_33268107_33268209_33268498_33268650_33269013_33269190_33269489_33269558_33269743_33269820_33269998_33270052_33270198_33270284_33271585
transcript_12157.known	chr1	+	1038	5	FSM	ENSG00000162755.14	ENST00000490724.6	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	11.4537111889553	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGCTTCACTTCAAAT	161097818	True	NA	-32	True	TATAAA	-16	NA	161098360	161100298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161098405_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_121589.known	chr6	+	589	6	FSM	ENSG00000231500.7	ENST00000474973.5	589	6	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_1	11671.6896737362	29008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029961	True	NA	6	True	AATAAA	-19	NA	33272074	33276510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272586_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_12159.nic	chr1	+	1143	5	NIC	ENSG00000162755.14	novel	1347	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	19.8415599185145	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097838	True	NA	16	True	ATTAAA	-19	NA	161098380	161100346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161098482_161098665_161099063_161099345_161099506_161099597_161099797_161100060
transcript_121603.known	chr6	+	549	6	FSM	ENSG00000231500.7	ENST00000439602.7	549	6	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3008.26046744626	504820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTCCTTTCTGTCCAT	33029961	True	NA	7	True	AATAAA	-20	NA	33272074	33276511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_121604.known	chr6	+	996	5	FSM	ENSG00000231500.7	ENST00000490191.5	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_4	2461.27786931911	5025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33030018	False	NA	6	True	AATAAA	-19	NA	33272131	33276510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272727_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_121605.known	chr6	+	685	7	FSM	ENSG00000231500.7	ENST00000476222.5	685	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	13058.9644008329	3696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33029982	True	NA	6	True	AATAAA	-19	NA	33272095	33276510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275499_33275658_33275796_33275884_33275964_33276067_33276175_33276268_33276390
transcript_121606.known	chr6	+	642	5	FSM	ENSG00000231500.7	ENST00000496813.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	2990.1821014781	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029985	True	NA	1	True	AATAAA	-14	NA	33272098	33276505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276067_33276175
transcript_121607.known	chr6	+	639	5	FSM	ENSG00000231500.7	ENST00000474626.5	639	5	0	0	0	0	multi-exon	FALSE	canonical	3	23596	junction_1	3308.74730827242	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGCTTCCTGTCCTTTCT	33029974	True	NA	1	True	AATAAA	-14	NA	33272087	33276505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33272123_33272627_33272727_33275796_33275884_33275964_33276268_33276390
transcript_121608.known	chr6	+	413	3	FSM	ENSG00000231500.7	ENST00000479802.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	3	24942	junction_2	1917	3530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTCCTTTCTGTCCA	33273525	True	NA	6	True	AATAAA	-19	NA	33275865	33276510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33276067_33276175_33276268_33276390
transcript_121610.known	chr6	+	1703	1	FSM	ENSG00000235863.4	ENST00000451237.3	1703	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGAGTGCAGTGTGGTCTT	33277036	False	NA	15	True	AATAAA	-15	NA	33277122	33278825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33277100_33278800
transcript_121611.known	chr6	-	2070	15	FSM	ENSG00000227057.10	ENST00000374617.9	2070	15	0	0	0	0	multi-exon	FALSE	canonical	3	597	junction_13	55.6996775720709	706	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTGTCTGGATCATCTT	-33280953	True	NA	-6	True	ATTAAA	-21	NA	33289239	33279107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33279375_33279496_33279611_33279763_33279860_33280427_33280523_33280673_33280988_33286794_33286895_33287090_33287227_33287354_33287506_33287613_33287719_33287964_33288027_33288147_33288236_33288357_33288471_33288613_33288695_33288803_33289014_33289101
transcript_121612.known	chr6	-	2896	18	FSM	ENSG00000237441.10	ENST00000497454.6	2896	18	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_17	60.3913419858444	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCTGTCCTTGCAGTAC	-33298232	True	NA	-1	True	AATAAA	-23	NA	33298942	33291653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33292314_33292429_33292545_33293015_33293307_33293412_33293525_33293603_33293700_33293794_33293917_33294033_33294067_33294687_33294763_33294976_33295046_33295126_33295212_33295318_33295423_33295507_33295760_33296027_33296326_33296413_33296465_33296597_33296777_33297031_33297116_33298454_33298652_33298869
transcript_121642.known	chr6	+	884	5	FSM	ENSG00000204220.12	ENST00000395131.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	110.020452644043	2696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	NA	False	NA	24	True	AATAAA	-17	NA	33289301	33290933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289621_33289769_33289921_33290173_33290245_33290325_33290451_33290715
transcript_12165.known	chr1	+	921	4	FSM	ENSG00000162755.14	ENST00000469647.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.6384431561566	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATTTGTCTCTGAAATT	161097820	True	NA	13	True	ATTAAA	-16	NA	161098362	161100343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161098405_161098665_161099063_161099597_161099797_161100060
transcript_121659.known	chr6	+	734	4	FSM	ENSG00000204220.12	ENST00000374606.10	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	30.4667396060396	5620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTTTCCTGACCAGGCA	33285738	True	NA	24	True	AATAAA	-17	NA	33289600	33290933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289921_33290173_33290245_33290325_33290451_33290715
transcript_121660.known	chr6	+	805	4	FSM	ENSG00000204220.12	ENST00000395134.3	805	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	130.573946695179	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAATGAGGCAGCTCTAG	33285733	True	NA	-34	True	NA	NA	NA	33289595	33290875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33289629_33289769_33289921_33290173_33290245_33290325
transcript_121661.known	chr6	-	3450	8	FSM	ENSG00000231925.13	ENST00000434618.7	3450	8	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_6	19.8020819354832	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTCTCTCATTCCAACCC	-33308328	False	5750	-17	True	AATAAA	-23	NA	33314078	33299693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313216_33313478_33313693_33313865_33314004
transcript_121662.known	chr6	-	1299	7	FSM	ENSG00000231925.13	ENST00000489157.5	1299	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	122.03471728251	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCACTCACTGCCATCCTG	-33308504	False	NA	-112	True	NA	NA	NA	33314254	33301759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33301772_33303954_33303990_33304127_33304218_33304296_33304639_33304988_33305388_33313693_33313865_33314004
transcript_121664.nic	chr6	-	919	3	ISM	ENSG00000231925.13	ENST00000437116.2	1239	5	-247	8746	-34	0	5prime_fragment	FALSE	canonical	3	298	junction_1	6	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTGCAGCTTGGCAG	-33308538	False	NA	NA	False	AAAACA	-4	NA	33314288	33313013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_33313478_33313693_33313865_33314004
transcript_121668.known	chr6	-	2606	8	FSM	ENSG00000204209.13	ENST00000266000.10	2606	8	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_7	230.127560013031	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	NA	False	NA	0	True	AATAAA	-25	NA	33323010	33318557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321975_33322861
transcript_121669.known	chr6	-	2558	8	FSM	ENSG00000204209.13	ENST00000374542.10	2558	8	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_7	141.208775815623	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317209	True	NA	0	True	AATAAA	-25	NA	33322959	33318557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33321718_33321978_33322861
transcript_12167.known	chr1	+	1333	4	FSM	ENSG00000162755.14	ENST00000392192.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	23.5843639350783	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTCTCTGAAATTTTT	161097851	True	NA	16	True	ATTAAA	-19	NA	161098393	161100346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161099063_161099345_161099506_161099578_161099797_161100060
transcript_121673.known	chr6	-	2355	7	FSM	ENSG00000204209.13	ENST00000414083.6	2355	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	377.244836501001	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTGTCTTTTTCTTGTC	NA	False	NA	-1	True	AATAAA	-24	NA	33323016	33318558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33320735_33321568_33322861
transcript_121679.nic	chr6	-	1479	6	NIC	ENSG00000204209.13	novel	2606	8	NA	NA	-12	0	intron_retention	FALSE	canonical	3	98	junction_5	368.158335502539	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTCTTTTTCTTGTCC	-33317221	True	NA	0	True	AATAAA	-25	NA	33322971	33318557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_33318803_33318996_33319220_33319379_33319855_33320010_33320225_33320379_33320592_33322861
transcript_121693.known	chr6	-	817	4	FSM	ENSG00000204209.13	ENST00000468536.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	434.635735095749	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACCACTGTCTTAGAGA	-33317180	True	NA	NA	False	NA	NA	NA	33322930	33319532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33319855_33320010_33320225_33320379_33320592_33322861
transcript_121696.known	chr6	+	2391	11	FSM	ENSG00000237649.8	ENST00000428849.7	2391	11	0	0	0	0	multi-exon	TRUE	canonical	3	439	junction_5	23.1216348902927	377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGCAGATACTTTCATAT	NA	False	NA	44	True	AATAAA	-23	NA	33391822	33409896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33391998_33398028_33398167_33398287_33398388_33403313_33403368_33403484_33403536_33403728_33404130_33404851_33405632_33406195_33406487_33406591_33406666_33406799_33406876_33409645
transcript_121727.known	chr6	-	762	6	FSM	ENSG00000112514.18	ENST00000374496.3	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	761.892538354327	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCGATACTTCAACGCCTT	-33411808	True	NA	-87	True	NA	NA	NA	33418070	33416618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417817_33417958
transcript_121732.known	chr6	-	855	6	FSM	ENSG00000112514.18	ENST00000488034.6	855	6	0	0	0	0	multi-exon	TRUE	canonical	3	550	junction_5	546.559639929624	4345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTTTATTTCTCTTTA	-33411845	True	NA	1	True	NA	NA	NA	33418107	33416441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_121733.known	chr6	-	822	5	FSM	ENSG00000112514.18	ENST00000440279.7	822	5	0	0	0	0	multi-exon	FALSE	canonical	3	1796	junction_3	71.550681338475	5881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTCTGCCTTTTGCCTGT	-33417879	False	6262	-20	True	AATAAA	-14	NA	33417921	33416551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250_33417311_33417480
transcript_121734.known	chr6	-	658	6	FSM	ENSG00000112514.18	ENST00000374484.8	658	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	797.150776202344	2988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-33411880	True	NA	-18	True	AATAAA	-16	NA	33418142	33416549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417246_33417311_33417480_33417696_33418086
transcript_121735.known	chr6	-	961	4	FSM	ENSG00000112514.18	ENST00000465956.1	961	4	0	0	0	0	multi-exon	FALSE	canonical	3	1796	junction_3	82.4472895585753	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTGCCTTTTGCCTGTT	-33417847	False	NA	-19	True	AATAAA	-15	NA	33417889	33416550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33416919_33416970_33417096_33417143_33417250
transcript_121736.known	chr6	-	676	5	FSM	ENSG00000112514.18	ENST00000488478.5	676	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	810.757477609673	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCTTTTGCCTGTTT	-33411824	True	NA	-18	True	AATAAA	-16	NA	33418086	33416549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33416777_33417096_33417143_33417250_33417311_33417480_33417696_33417958
transcript_121737.known	chr6	-	1378	2	FSM	ENSG00000112514.18	ENST00000487637.1	1378	2	0	0	0	0	multi-exon	FALSE	canonical	3	1899	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGGGTCTCTCTGCCT	-33411846	True	NA	-29	True	AATAAA	-5	NA	33418108	33416560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33417311_33417480
transcript_121739.known	chr6	+	2073	10	FSM	ENSG00000197283.18	ENST00000479510.2	2073	10	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	3.52766841475279	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCACAGAG	33420007	False	NA	NA	False	NA	NA	NA	33420069	33439121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33420332_33423476_33423599_33425797_33425904_33432160_33432253_33432684_33432807_33435151_33435306_33435514_33435614_33437667_33438292_33438418_33438564_33438774
transcript_121740.known	chr6	+	2715	2	FSM	ENSG00000213588.6	ENST00000395064.3	2715	2	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	0	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTGGACTGGATTGA	NA	False	NA	20	True	AATAAA	-20	NA	33454575	33457544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33454776_33455029
transcript_121741.known	chr6	-	422	1	FSM	ENSG00000274259.2	ENST00000614205.1	422	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGTGGATATATACA	NA	False	NA	NA	False	ATTAAA	-32	NA	33454408	33453986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33454000_33454400
transcript_121743.nnic	chr6	-	2278	7	NNC	ENSG00000030110.14	novel	2170	6	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	canonical	3	8	junction_6	199.561533256175	573	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-33573198	True	NA	-7	True	AATAAA	-17	NA	33580273	33572551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33577797_33577909_33580024
transcript_121744.known	chr6	-	2170	6	FSM	ENSG00000030110.14	ENST00000374467.4	2170	6	0	0	0	0	multi-exon	TRUE	canonical	3	434	junction_3	48.0183298335125	942	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGACTTAGTTTTTGTAT	-33573201	True	NA	-7	True	AATAAA	-17	NA	33580276	33572551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33573908_33574033_33574215_33575297_33575442_33575792_33575929_33577534_33577636_33580024
transcript_121762.known	chr6	+	9870	59	FSM	ENSG00000096433.11	ENST00000374316.9	9870	59	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	39.9678564368538	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGTGTTTCCTGCACTC	33620278	False	NA	27	True	AATAAA	-27	NA	33620364	33696574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_33620437_33620614_33621692_33640483_33640555_33655765_33655888_33657931_33658019_33658669_33658829_33659020_33659120_33659465_33659550_33662527_33662675_33662910_33663007_33663499_33663551_33663737_33663881_33664869_33664970_33665052_33665214_33665834_33665977_33667128_33667291_33667791_33667965_33668514_33668635_33668973_33669157_33670324_33670577_33670670_33670816_33671164_33671307_33672028_33672229_33673590_33673721_33674207_33674266_33675690_33675857_33676767_33676933_33677014_33677090_33677503_33677630_33678420_33678544_33678638_33678840_33679881_33680134_33680328_33680455_33680554_33680681_33682523_33682645_33683206_33683398_33684019_33684169_33684356_33684466_33684597_33684689_33684773_33684944_33685358_33685534_33685642_33685828_33686052_33686254_33686408_33686520_33687008_33687105_33687225_33687328_33687477_33687565_33688056_33688168_33688238_33688432_33688655_33688782_33689237_33689411_33690033_33690199_33690916_33691110_33691614_33691720_33691800_33691929_33692727_33692894_33693544_33693706_33694923_33695086_33695711
transcript_121763.known	chr6	-	1284	4	FSM	ENSG00000137288.10	ENST00000607484.6	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	1651	junction_3	89.8047264284508	4298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTTATGCCGAAATGCAG	-33699973	True	NA	-4	True	AATAAA	-23	NA	33711700	33696763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33697751_33700443_33700514_33701345_33701421_33711548
transcript_121764.known	chr6	-	432	3	FSM	ENSG00000137288.10	ENST00000374214.3	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	833.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTACGGTTTGGGAATCTC	-33700000	True	NA	-10	True	AATAAA	-22	NA	33711727	33697567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33697751_33700443_33700514_33711548
transcript_121766.known	chr6	-	558	5	FSM	ENSG00000096395.11	ENST00000430124.7	558	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACTCTTATTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	33804003	33794672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_33794836_33795502_33795606_33799104_33799222_33801046_33801171_33803952
transcript_121767.known	chr6	+	311	2	FSM	ENSG00000214810.4	ENST00000399027.3	311	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAATAATTGGCCACTG	NA	False	NA	NA	False	AAAAAG	-8	NA	34219438	34220066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34219706_34220022
transcript_121774.known	chr6	+	1887	6	FSM	ENSG00000137309.20	ENST00000401473.7	1887	6	0	0	0	0	multi-exon	FALSE	canonical	3	6101	junction_3	5391.33458060247	3266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_121775.known	chr6	+	1920	6	FSM	ENSG00000137309.20	ENST00000311487.9	1920	6	0	0	0	0	multi-exon	FALSE	canonical	3	16478	junction_3	1396.17769642693	3367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34236964_34237203_34237318_34240736_34240916_34242711_34242796_34243467_34243519_34244830
transcript_121781.known	chr6	+	1773	5	FSM	ENSG00000137309.20	ENST00000347617.10	1773	5	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	7979.74966320999	4280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGTCTCCTGTGGTGTG	33829092	True	NA	49	True	AATAAA	-20	NA	34236872	34246231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34236964_34240736_34240883_34242711_34242796_34243467_34243519_34244830
transcript_121784.nnic	chr6	-	1081	5	NNC	ENSG00000272325.2	novel	9900	5	NA	NA	471	-8537	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	217.220510081346	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTAATTTTTCAAGGT	-34392182	False	69	-14	True	AATAAA	-20	NA	34392198	34288215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34392074
transcript_121787.known	chr6	-	4782	9	FSM	ENSG00000270800.3	ENST00000639725.1	4782	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	4723.79693017174	2172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATAGTCAAGTTCCTTTG	-34211711	True	NA	NA	False	NA	NA	NA	34426071	34284886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_121788.known	chr6	-	2911	9	FSM	ENSG00000270800.3	ENST00000639877.1	2911	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	4750.1124180776	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCTCTACTAAAAATGCAG	-34211686	True	NA	NA	False	NA	NA	NA	34426046	34286968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34288932_34293450_34293536_34295640_34295686_34341861_34341973_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_121795.known	chr6	-	823	4	FSM	ENSG00000270800.3	ENST00000494077.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5135.02030721939	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGACAGAGATACCTACAGA	-34211681	True	NA	NA	False	NA	NA	NA	34426041	34421765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34421808_34424668_34424841_34425071_34425222_34425582
transcript_121796.known	chr6	-	1053	5	FSM	ENSG00000186577.14	ENST00000481533.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	49.3203811826308	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247773	True	NA	-26	True	AATAAA	-15	NA	34248989	34246394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248726
transcript_121797.known	chr6	-	903	5	FSM	ENSG00000186577.14	ENST00000468145.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	62.3718686588754	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGGCAGGCTTTGGAGTT	-34247773	True	NA	-116	True	NA	NA	NA	34248989	34246484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248726
transcript_1218.nnic	chr1	-	1678	12	NNC	ENSG00000116213.16	novel	1692	12	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	79.9728259633357	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646730	False	NA	-2	True	AATAAA	-20	NA	3650110	3630769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_3631118_3631465_3631658_3632212_3632318_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_121800.known	chr6	-	1093	4	FSM	ENSG00000186577.14	ENST00000637920.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	68.5143942702716	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247839	True	NA	-26	True	AATAAA	-15	NA	34249055	34246394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248726
transcript_121803.known	chr6	-	363	1	FSM	ENSG00000220583.1	ENST00000402419.1	363	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	577	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGAGGAGCGCATTGTCC	NA	False	NA	NA	False	NA	NA	NA	34263673	34263310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34263300_34263700
transcript_121804.known	chr6	-	818	5	FSM	ENSG00000186577.14	ENST00000476320.6	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	27.2889629704025	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247790	True	NA	-26	True	AATAAA	-15	NA	34249006	34246394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247680_34247865_34248978
transcript_121805.known	chr6	-	792	5	FSM	ENSG00000186577.14	ENST00000394990.8	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	53.6300988251933	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247824	True	NA	-26	True	AATAAA	-15	NA	34249040	34246394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247466_34247493_34247740_34247865_34248978
transcript_121806.known	chr6	-	806	4	FSM	ENSG00000186577.14	ENST00000413013.6	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	64.5652125115891	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTTTGATTTCATCAAG	-34247804	True	NA	-26	True	AATAAA	-15	NA	34249020	34246394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34246869_34247043_34247150_34247680_34247865_34248978
transcript_121823.known	chr6	-	615	6	FSM	ENSG00000124614.16	ENST00000464218.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	1	72	junction_5	4040.21352901056	26112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34425559	False	NA	-5	True	AATAAA	-22	NA	34425580	34417453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425515
transcript_121824.known	chr6	-	777	6	FSM	ENSG00000124614.16	ENST00000467531.5	777	6	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_5	4040.98218753807	26124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34425763	False	NA	-5	True	AATAAA	-22	NA	34425784	34417453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425557
transcript_121830.known	chr6	-	588	6	FSM	ENSG00000124614.16	ENST00000648437.1	588	6	0	0	0	0	multi-exon	FALSE	canonical	3	7167	junction_5	1530.98169812705	159036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211709	True	NA	-5	True	AATAAA	-22	NA	34426069	34417453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_121831.known	chr6	-	781	6	FSM	ENSG00000124614.16	ENST00000621356.3	781	6	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_5	3414.76332415586	43138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211666	True	NA	-5	True	AATAAA	-22	NA	34426026	34417453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34425795
transcript_121832.known	chr6	-	1407	5	FSM	ENSG00000124614.16	ENST00000644700.1	1407	5	0	0	0	0	multi-exon	FALSE	canonical	3	7167	junction_4	1578.5908866771	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211707	True	NA	-5	True	AATAAA	-22	NA	34426067	34417453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_121833.known	chr6	-	671	7	FSM	ENSG00000124614.16	ENST00000344700.8	671	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4681.31711344859	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTCCATTTTGTTTG	-34211692	True	NA	-5	True	AATAAA	-22	NA	34426052	34417453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417548_34417797_34417898_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_121834.known	chr6	-	638	6	FSM	ENSG00000124614.16	ENST00000644393.1	638	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4072.86771697781	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAAACCTTAATCTTTTG	-34211709	True	NA	-18	True	AATAAA	-9	NA	34426069	34417466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34417611_34418368_34418425_34421729_34421808_34424668_34424841_34425071_34425222_34426031
transcript_121836.known	chr6	-	4338	5	FSM	ENSG00000196821.10	ENST00000374023.8	4338	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.747548783982	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-34695673	True	NA	-15	True	ATTAAA	-22	NA	34696767	34587287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34590601_34606554_34606905_34646600_34646799_34654624_34654780_34696445
transcript_121839.known	chr6	-	4232	4	FSM	ENSG00000196821.10	ENST00000374026.7	4232	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	22.8619042659763	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATGTGTGTTGG	-34695765	True	NA	-15	True	ATTAAA	-22	NA	34696859	34587287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34590601_34606554_34606905_34654624_34654780_34696445
transcript_121845.known	chr6	+	718	2	FSM	ENSG00000272288.7	ENST00000606971.5	718	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	NA	False	NA	9	True	AATAAA	-15	NA	34696316	34697470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34696723_34697158
transcript_121846.known	chr6	+	365	2	FSM	ENSG00000272288.7	ENST00000606496.2	371	2	5	1	5	0	multi-exon	FALSE	canonical	3	32	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGCCTTGTTCTGTGTTT	34696286	True	NA	9	True	AATAAA	-15	NA	34696944	34697470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34696998_34697158
transcript_121851.nnic	chr6	-	687	4	Antisense	novelGene_ENSG00000217130.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCTCAGTGGATT	-34757298	True	NA	2	True	AATAAA	-19	NA	34757398	34726093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_34726337_34755667_34755693_34756108_34756228_34757098
transcript_121853.nnic	chr6	-	698	4	Antisense	novelGene_ENSG00000217130.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCTCAGTGGATT	-34757298	True	NA	2	True	AATAAA	-19	NA	34757398	34726093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_34726348_34755667_34755693_34756108_34756228_34757098
transcript_121856.nnic	chr6	-	662	3	Antisense	novelGene_ENSG00000217130.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTCTCAGTGGATT	-34757298	True	NA	2	True	AATAAA	-19	NA	34757398	34726093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_34726337_34756108_34756228_34757098
transcript_121858.known	chr6	+	498	1	FSM	ENSG00000217130.1	ENST00000408001.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	281	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	34744175	34744673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34744200_34744700
transcript_121863.known	chr6	+	806	6	FSM	ENSG00000124562.10	ENST00000244520.10	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	2122	junction_1	409.602050776116	15079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTTTCTCTAGCTCAT	34738575	True	NA	7	True	TATAAA	-18	NA	34757504	34773857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34757552_34757911_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_121864.known	chr6	+	1054	5	FSM	ENSG00000124562.10	ENST00000374017.3	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_3	168.690545081815	3869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTTCCCTTTTTCCTCC	34738624	True	NA	24	True	AATAAA	-24	NA	34757553	34773794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_34757955_34762594_34762704_34767907_34767998_34770290_34770396_34773445
transcript_12187.known	chr1	-	408	2	FSM	ENSG00000143256.5	ENST00000468311.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGCCTGAAGTTTTCT	-161093885	True	NA	0	True	ATTAAA	-20	NA	161118055	161100555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161100860_161117951
transcript_121872.known	chr6	-	1465	4	FSM	ENSG00000064995.19	ENST00000420584.3	1465	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	151.085700477871	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGGTGTATTCATTTTCT	-34879613	True	NA	-3	True	ATTAAA	-17	NA	34888071	34877777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_34878721_34880288_34880377_34882931_34883081_34887786
transcript_121875.known	chr6	+	2447	13	FSM	ENSG00000065029.15	ENST00000339411.5	2447	13	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	22.5345413877353	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGTCCCTCCATCCT	35259746	False	NA	8	True	AATAAA	-14	NA	35259773	35295983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35294455_35294570_35295143
transcript_121878.known	chr6	+	2653	14	FSM	ENSG00000065029.15	ENST00000373953.8	2653	14	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_12	17.1277828905426	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTCCCTCCATCCTTT	35259073	True	NA	10	True	AATAAA	-16	NA	35259734	35295985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35259842_35281055_35281225_35286127_35286209_35286321_35286400_35287645_35287846_35290265_35290383_35290640_35290717_35291277_35291404_35291557_35291738_35292553_35292788_35292880_35293045_35293750_35293916_35294455_35294570_35295143
transcript_121879.known	chr6	+	2296	11	FSM	ENSG00000023892.11	ENST00000316637.7	2296	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.5841169733915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	35297270	True	NA	NA	False	AATAAA	-19	NA	35297817	35321771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35297953_35309669_35309811_35310458_35310645_35312301_35312539_35312625_35312773_35317890_35318000_35318172_35318472_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_12188.known	chr1	-	598	4	FSM	ENSG00000143256.5	ENST00000368010.4	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	1445	junction_1	123.083530805529	28128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGCTGTAGCCTGAAGT	-161093867	True	NA	-5	True	ATTAAA	-15	NA	161118037	161100560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161100860_161102047_161102172_161102286_161102376_161117951
transcript_121880.nnic	chr6	+	1454	5	NNC	ENSG00000023892.11	novel	2296	11	NA	NA	980	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	39.0736484091261	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGCTCAGGTCTGTCC	35318494	True	NA	NA	False	AATAAA	-19	NA	35318587	35321771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_35319000_35319523_35319691_35319818_35320018_35320883_35320975_35321186
transcript_121891.nnic	chr6	+	851	3	NNC	ENSG00000112033.14	novel	3453	6	NA	NA	-18	-68540	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	51.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATATTGTTCTTACATTAG	35340468	True	NA	5	True	AATAAA	-14	NA	35342539	35356853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_35342682_35347066_35347151_35356228
transcript_121896.known	chr6	+	2576	10	FSM	ENSG00000112039.5	ENST00000229769.3	2576	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	13.3036707085296	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTTTCTTTTTTTTTT	35451454	True	NA	NA	False	AATAAA	-15	NA	35452337	35467102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35452794_35455746_35456354_35457555_35457601_35457915_35457985_35458296_35458441_35459330_35459455_35459681_35459761_35460551_35460619_35462788_35462915_35466243
transcript_1219.known	chr1	-	1692	12	FSM	ENSG00000116213.16	ENST00000270708.12	1692	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	34.5160161649752	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTCTTCTTGAAACG	-3646723	True	NA	-2	True	AATAAA	-20	NA	3650103	3630769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3631118_3631465_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_12192.known	chr1	+	1485	7	FSM	ENSG00000158793.14	ENST00000368009.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	23.4852199384114	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCATGTCCCAGCCCCATT	161115410	True	NA	4	True	AATAAA	-14	NA	161118104	161121194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_121921.known	chr6	+	1063	5	FSM	ENSG00000198755.11	ENST00000464112.5	1063	5	0	0	0	0	multi-exon	FALSE	canonical	3	14193	junction_4	173.618835383722	27646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276990	True	NA	28	True	AATAAA	-20	NA	35468419	35470785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_121922.known	chr6	+	718	6	FSM	ENSG00000198755.11	ENST00000322203.7	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1858.10047091109	214592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTGTCTGCCTGTGATT	35276971	True	NA	23	True	AATAAA	-15	NA	35468400	35470780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469028_35469380_35469530_35470178_35470352_35470579
transcript_121923.known	chr6	+	1069	5	FSM	ENSG00000198755.11	ENST00000467020.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	1963.28888602773	6208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276978	True	NA	28	True	AATAAA	-20	NA	35468407	35470785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469530_35470178_35470352_35470579
transcript_121924.known	chr6	+	962	6	FSM	ENSG00000198755.11	ENST00000478340.2	962	6	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_3	5185.38750721679	4816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCCTGTGATTGAGGG	35276990	True	NA	28	True	AATAAA	-20	NA	35468419	35470785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35468874_35468946_35469286_35469380_35469530_35470178_35470352_35470579
transcript_121925.known	chr6	+	632	5	FSM	ENSG00000198755.11	ENST00000490335.4	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	9710	junction_1	2028.48975533523	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTGGCTGTCAAC	35276990	True	NA	NA	False	NA	NA	NA	35468419	35470640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35468440_35468798_35469028_35469380_35469530_35470178_35470352_35470579
transcript_121926.known	chr6	-	1676	13	FSM	ENSG00000007866.22	ENST00000639578.3	1676	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	48.1498673126128	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCTGCCACTGTTCTG	-35495665	True	NA	NA	False	NA	NA	NA	35497064	35474891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480059_35480123_35484559_35484625_35486460_35486712_35496897
transcript_121927.known	chr6	-	2986	13	FSM	ENSG00000007866.22	ENST00000338863.13	2986	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_12	23.6619713652284	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35495680	True	NA	-2	True	ATTAAA	-29	NA	35497079	35473596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460_35486712_35496897
transcript_121929.nic	chr6	-	2863	12	ISM	ENSG00000007866.22	ENST00000338863.13	2986	13	10309	0	10180	0	3prime_fragment	FALSE	canonical	3	98	junction_9	15.4181389364755	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTGTGTGCCAGACCTT	-35485892	True	NA	-2	True	ATTAAA	-29	NA	35486770	35473596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_35475158_35475335_35475489_35475565_35475707_35475918_35476093_35476301_35476436_35477310_35477373_35478274_35478325_35478433_35478572_35479304_35479317_35480311_35480375_35484559_35484625_35486460
transcript_12193.known	chr1	+	2081	7	FSM	ENSG00000158793.14	ENST00000368008.5	2081	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	76.4324320342266	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTTGTAATTCTATGC	161115423	True	NA	NA	False	AATAAA	-20	NA	161118117	161125445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118179_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161124140
transcript_121946.known	chr6	+	1454	3	FSM	ENSG00000228559.2	ENST00000658088.1	1454	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGTATAGAAGTGATTGT	35543626	True	NA	NA	False	AATAAA	-13	NA	35543729	35546573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35543759_35544867_35544934_35545214
transcript_121947.known	chr6	+	392	1	FSM	ENSG00000219023.1	ENST00000403958.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	377	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	35555872	35556264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35555900_35556300
transcript_121950.known	chr6	-	3750	11	FSM	ENSG00000096060.15	ENST00000357266.9	3750	11	0	0	0	0	multi-exon	FALSE	canonical	2	230	junction_7	44.3594409342589	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCATTGTTTTTGGTTT	-35683637	True	NA	-10	True	AATAAA	-17	NA	35688915	35573589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35575943_35576993_35577234_35580035_35580222_35587033_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_121956.nic	chr6	-	1174	8	ISM	ENSG00000096060.15	ENST00000357266.9	3750	11	-17	13258	10	-6291	5prime_fragment	FALSE	canonical	2	230	junction_4	51.522137108673	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAGATTCCTCTTTTACA	-35683654	True	NA	NA	False	AAAACA	-22	NA	35688932	35586847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_35587118_35591129_35591221_35597247_35597405_35619095_35619211_35620131_35620275_35637013_35637159_35642719_35642844_35688803
transcript_121960.known	chr6	+	488	4	FSM	ENSG00000196748.10	ENST00000360454.6	488	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.3648246606609	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776337	False	NA	2	True	ATTAAA	-14	NA	35776614	35779552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776703_35777458_35777582_35777850_35777930_35779354
transcript_121961.nic	chr6	+	510	4	NIC	ENSG00000196748.10	novel	488	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	4.54606056566195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776417	False	NA	2	True	ATTAAA	-14	NA	35776694	35779552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_35776805_35777458_35777582_35777850_35777930_35779354
transcript_121962.known	chr6	+	426	3	FSM	ENSG00000196748.10	ENST00000403376.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776320	True	NA	2	True	ATTAAA	-14	NA	35776597	35779552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776703_35777458_35777582_35779354
transcript_121963.known	chr6	+	532	3	FSM	ENSG00000196748.10	ENST00000481904.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	11.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776316	True	NA	2	True	ATTAAA	-14	NA	35776593	35779552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776805_35777458_35777582_35779354
transcript_121964.known	chr6	+	313	2	FSM	ENSG00000196748.10	ENST00000467122.1	313	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTCTGTCTGTACTT	35776412	False	NA	2	True	ATTAAA	-14	NA	35776689	35779552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_35776805_35779354
transcript_121965.nnic	chr6	+	707	4	Fusion	ENSG00000196748.10_ENSG00000204140.10	novel	488	4	NA	NA	-68	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5521135891752	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCCCACAGAGTTGG	NA	False	NA	NA	False	AATAAA	-15	NA	35776525	35788150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_35776703_35777458_35777582_35786997_35787121_35787866
transcript_121967.nnic	chr6	+	573	3	Fusion	ENSG00000196748.10_ENSG00000204140.10	novel	426	3	NA	NA	-57	0	multi-exon	FALSE	canonical	1	2	junction_1	1	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCCCACAGAGTTGG	35776259	True	NA	NA	False	AATAAA	-15	NA	35776536	35788150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_35776703_35786997_35787121_35787866
transcript_12197.nnic	chr1	+	1344	7	NNC	ENSG00000158793.14	novel	1485	7	NA	NA	3	-126	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	81.9186588431883	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGGACATCGCCTTT	161115394	True	NA	14	True	CATAAA	-4	NA	161118088	161121067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_161118179_161118815_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_121970.known	chr6	-	4357	16	FSM	ENSG00000096063.16	ENST00000423325.6	4357	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	211.040912305332	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTCCAAAAATCTCTG	-35908061	True	NA	-9	True	AATAAA	-20	NA	35921147	35833033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891042_35920467_35920529_35921043
transcript_121971.known	chr6	-	4348	16	FSM	ENSG00000096063.16	ENST00000373825.7	4348	16	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_4	65.2368675588343	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGAGTATGCTTTTTT	-35908012	True	NA	-2	True	AGTAAA	-13	NA	35921098	35832965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35835489_35838336_35838430_35842534_35842605_35857260_35857369_35869009_35869111_35869481_35869902_35870280_35870495_35870933_35870960_35872562_35872729_35874232_35874340_35886723_35886812_35888023_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_121972.known	chr6	-	634	5	FSM	ENSG00000096063.16	ENST00000513367.1	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	802	junction_4	74.2912343416099	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTCTTCTTACACGCA	-35908015	True	NA	NA	False	NA	NA	NA	35921101	35887824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_35888112_35888814_35888924_35890894_35891014_35920467_35920529_35921043
transcript_121976.known	chr6	+	6316	12	FSM	ENSG00000156711.17	ENST00000211287.9	6316	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	7.82768977877428	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGTGCACAGACCCCTG	36130021	True	NA	4	True	AATAAA	-18	NA	36130512	36144521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36130702_36131270_36131401_36132620_36132680_36135752_36135862_36136018_36136049_36136483_36136532_36136655_36136771_36136878_36136951_36138364_36138445_36138701_36138781_36138878_36139056_36139293
transcript_121978.known	chr6	+	582	2	FSM	ENSG00000096070.19	ENST00000454960.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCCCCGCTGCCTGCTGC	36196817	True	NA	NA	False	NA	NA	NA	36197451	36200709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36197621_36200296
transcript_121979.known	chr6	-	587	4	FSM	ENSG00000246982.7	ENST00000526611.5	587	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	6.84754619472471	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGGTGTGGTGGCATGTG	-36197180	True	NA	NA	False	AATAAA	-14	NA	36197203	36146697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36146931_36179616_36179708_36196036_36196171_36197074
transcript_12198.known	chr1	+	1518	7	FSM	ENSG00000158793.14	ENST00000392190.9	1518	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	82.2869302434408	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	161115423	True	NA	3	True	AATAAA	-13	NA	161118117	161121193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118226_161118785_161118882_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_121980.known	chr6	+	5384	8	FSM	ENSG00000112078.14	ENST00000373731.7	5384	8	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_3	25.7871982161059	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTTTTTTTTTTAG	36439629	True	NA	4	True	AATAAA	-14	NA	36442999	36491141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36443112_36470051_36470258_36474788_36475063_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_121981.known	chr6	-	1605	8	FSM	ENSG00000010030.14	ENST00000340181.9	1605	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	2.43276948084663	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	-36387615	False	NA	-2	True	AATAAA	-16	NA	36387669	36366193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36375870_36376036_36385533_36385670_36387535
transcript_121982.known	chr6	+	1339	7	FSM	ENSG00000112078.14	ENST00000265344.8	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	69.1586340717243	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTGGGTCTGGTGCT	36439665	True	NA	-86	True	NA	NA	NA	36443035	36487406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36443112_36470051_36470258_36479120_36479224_36479590_36479712_36481561_36481760_36484713_36484825_36486882
transcript_121985.known	chr6	-	1570	7	FSM	ENSG00000010030.14	ENST00000373738.4	1570	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.73353657780945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-36387746	True	NA	-3	True	AATAAA	-15	NA	36387800	36366194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36385533_36385670_36387535
transcript_121986.known	chr6	-	1488	7	FSM	ENSG00000010030.14	ENST00000373737.8	1488	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.68741924943285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTTCTTTTATTTTT	-36387729	True	NA	-2	True	AATAAA	-16	NA	36387783	36366193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36373452_36373579_36375870_36376036_36385533_36385670_36387535
transcript_121994.known	chr6	-	1434	6	FSM	ENSG00000010030.14	ENST00000538992.3	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.03960780543711	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTTCTTTTATTTT	-36387746	True	NA	-3	True	AATAAA	-15	NA	36387800	36366194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36366763_36366874_36366976_36368928_36369072_36371329_36371561_36373452_36373579_36387535
transcript_121999.known	chr6	+	1618	4	FSM	ENSG00000112078.14	ENST00000474988.5	1618	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	79.5501239610739	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACTCATAAGAGTGCCAG	36439646	True	NA	NA	False	NA	NA	NA	36443016	36488096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36443112_36481561_36481760_36484713_36484825_36486882
transcript_1220.known	chr1	-	1998	11	FSM	ENSG00000116213.16	ENST00000378322.7	1998	11	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.090995481007	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTTGAAACGTTT	-3646678	True	NA	1	True	AATAAA	-23	NA	3650058	3630766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3631658_3632212_3632339_3633397_3633504_3634996_3635075_3635159_3635295_3635943_3636031_3636994_3637099_3638749_3638823_3646665_3646783_3647407_3647561_3649930
transcript_122000.known	chr6	+	319	2	FSM	ENSG00000224666.3	ENST00000411643.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTTGGGTTGCTTTATG	NA	False	NA	NA	False	NA	NA	NA	36386830	36391994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36386931_36391775
transcript_122001.known	chr6	+	406	2	FSM	ENSG00000112078.14	ENST00000443316.2	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTTCAGGTTTAGAAGC	36439641	True	NA	NA	False	AATAAA	-19	NA	36443011	36443723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36443112_36443417
transcript_122002.nnic	chr6	-	2308	14	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	37.2054904645814	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-36545254	True	NA	-10	True	AATAAA	-14	NA	36547479	36493891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36494638_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_122004.known	chr6	-	3585	14	FSM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	27.7970242330545	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGGAAATACGTGGTGT	-36545254	True	NA	-10	True	AATAAA	-14	NA	36547479	36493891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36495915_36496710_36496806_36497779_36497876_36498362_36498487_36499872_36499991_36506582_36506645_36507499_36507603_36515337_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_122007.nic	chr6	-	1203	7	ISM	ENSG00000112079.9	ENST00000229812.8	3585	14	0	21207	0	-21207	5prime_fragment	FALSE	canonical	3	37	junction_6	34.4790596675077	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATGTAGAGGGCAATTTT	-36545254	True	NA	NA	False	AATAAA	-25	NA	36547479	36515098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_36515493_36517716_36517841_36521733_36521818_36524340_36524464_36525590_36525643_36540071_36540208_36547189
transcript_122009.nnic	chr6	-	734	3	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	0	-38104	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	17	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTTTTTTTATTTTG	-36545254	True	NA	NA	False	AGTAAA	-26	NA	36547479	36531995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36532304_36540071_36540208_36547189
transcript_122010.nnic	chr6	-	641	3	NNC	ENSG00000112079.9	novel	3585	14	NA	NA	0	-38197	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	17	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGATAATTGATAATGAAG	-36545254	True	NA	NA	False	AATAAA	-15	NA	36547479	36532088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_36532304_36540071_36540208_36547189
transcript_122026.known	chr6	+	4228	6	FSM	ENSG00000112081.17	ENST00000373715.11	4228	6	0	0	0	0	multi-exon	FALSE	canonical	3	3517	junction_3	225.015910548565	23847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTATCCTGCTTTCTCT	36506755	True	NA	NA	False	AATACA	-16	NA	36594361	36605600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36601151_36601191_36601707_36601795_36601961
transcript_122027.known	chr6	+	1095	7	FSM	ENSG00000112081.17	ENST00000477442.6	1095	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	1807.05925162649	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATGTACAGAAAATTCAA	36506784	True	NA	NA	False	NA	NA	NA	36594390	36602040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36594482_36596760_36596969_36598848_36598984_36599820_36600277_36601151_36601191_36601707_36601795_36601961
transcript_122028.known	chr6	+	2104	4	FSM	ENSG00000124762.14	ENST00000448526.6	2104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	107.97942190786	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676243	True	NA	30	True	AATAAA	-24	NA	36676489	36687337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36676525_36677901_36677934_36684096_36684547_36685750
transcript_122030.known	chr6	+	793	4	FSM	ENSG00000124762.14	ENST00000373711.3	793	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	108.42611411566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACATACCCTGGCCGC	36674323	True	NA	NA	False	TTTAAA	-9	NA	36678720	36685924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36678799_36682639_36682731_36684096_36684547_36685750
transcript_122033.known	chr6	+	2102	3	FSM	ENSG00000124762.14	ENST00000615513.4	2102	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	112.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36676213	True	NA	30	True	AATAAA	-24	NA	36676459	36687337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36676525_36684096_36684547_36685750
transcript_122035.known	chr6	+	2267	3	FSM	ENSG00000124762.14	ENST00000405375.5	2267	3	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	111	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTACTATTGTGGTTAT	36674312	True	NA	30	True	AATAAA	-24	NA	36678709	36687337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36678940_36684096_36684547_36685750
transcript_122036.known	chr6	-	951	1	FSM	ENSG00000285244.1	ENST00000643333.1	951	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTACTGGTTCTTCTGA	-36678529	True	NA	NA	False	AATAAA	-15	NA	36678559	36677608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36677600_36678600
transcript_122037.known	chr6	+	2117	3	FSM	ENSG00000124762.14	ENST00000244741.10	2117	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	2	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTAATATTACTATTGTG	36674316	True	NA	25	True	AATAAA	-19	NA	36678713	36687332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36678799_36684096_36684547_36685750
transcript_122038.known	chr6	+	6763	9	FSM	ENSG00000198663.17	ENST00000480824.7	6763	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	20.920982290514	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTCTTGTTGGTGTCA	36884594	True	NA	14	True	ATTAAA	-19	NA	36885951	36928964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36886029_36894503_36894604_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_122041.known	chr6	+	1309	8	FSM	ENSG00000198663.17	ENST00000355190.7	1309	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	8.96705990084298	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTTTCTGGGGGTTGGTT	36884506	True	NA	5	True	AATAAA	-17	NA	36885863	36923522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_36886029_36899425_36899634_36902220_36902435_36914283_36914436_36914553_36914694_36916444_36916575_36919577_36919702_36923346
transcript_122043.known	chr6	-	1516	4	FSM	ENSG00000137168.8	ENST00000373699.6	1516	4	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	13.4742552876052	3647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTGTGGTCTGATTC	-36874784	False	NA	-21	True	AATAAA	-20	NA	36874803	36854828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36856034_36856585_36856655_36871717_36871873_36874716
transcript_122045.known	chr6	-	1955	12	FSM	ENSG00000137409.20	ENST00000373627.10	1955	12	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_4	539.922568675629	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	-36966301	True	NA	-7	True	AATAAA	-18	NA	36986196	36968140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972651_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_122047.known	chr6	-	2006	12	FSM	ENSG00000137409.20	ENST00000373616.9	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	1723	junction_4	396.87837719003	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGTGGGGCGTCTCT	NA	False	NA	-7	True	AATAAA	-18	NA	36986298	36968140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_36968975_36970038_36970115_36970405_36970474_36970646_36970695_36972702_36972797_36975657_36975718_36977198_36977251_36977633_36977692_36978077_36978156_36978504_36978612_36981587_36981673_36985852
transcript_122052.nnic	chr6	+	602	2	NNC	ENSG00000065491.8	novel	3462	13	NA	NA	0	-68942	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGTATTTTTT	37256501	True	NA	10	True	ATTAAA	-22	NA	37257771	37264028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_37257974_37263628
transcript_122053.known	chr6	-	1955	2	FSM	ENSG00000172738.12	ENST00000357219.4	1955	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCAATTTATGTCTCGA	-37258083	False	NA	-6	True	AATAAA	-16	NA	37258122	37217641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_37219042_37257567
transcript_122054.known	chr6	+	3462	13	FSM	ENSG00000065491.8	ENST00000373491.3	3462	13	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	11.9172494030012	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGTTTTTCTCCTGT	37256501	True	NA	10	True	AATAAA	-20	NA	37257771	37332970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37257974_37269593_37269651_37279303_37279612_37282184_37282365_37282881_37282953_37284335_37284465_37287006_37287073_37291242_37291358_37312917_37313025_37313815_37313892_37316702_37316831_37317110_37317207_37331043
transcript_122056.nic	chr6	+	2312	9	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	125.668151792727	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353943	37391231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_122059.known	chr6	+	2124	8	FSM	ENSG00000112130.17	ENST00000229866.10	2124	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	106.524118185048	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCTTACCTCTTCTTTG	37347682	True	NA	-51	True	NA	NA	NA	37354014	37391168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37360445_37360575_37368377_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_122060.known	chr6	+	5616	8	FSM	ENSG00000112130.17	ENST00000373479.9	5616	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	40.4464877009975	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATCAAATGCCCATTTTC	37347650	True	NA	NA	False	AATAAA	-16	NA	37353982	37394734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37381149_37381355_37390741
transcript_122071.known	chr6	+	1800	7	FSM	ENSG00000112130.17	ENST00000469731.5	1800	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	113.516029215653	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	37347758	False	NA	12	True	AATAAA	-13	NA	37354090	37391231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37374619_37374710_37376925_37377034_37390741
transcript_122072.nic	chr6	+	2102	7	NIC	ENSG00000112130.17	novel	5616	8	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_4	111.467110246326	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTGCTCAGCTGGGCTT	NA	False	NA	12	True	AATAAA	-13	NA	37353903	37391231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_37354276_37360445_37360575_37368483_37369219_37371511_37371575_37376925_37377034_37381149_37381355_37390741
transcript_122080.known	chr6	+	977	4	FSM	ENSG00000112130.17	ENST00000494320.5	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	104.416899441081	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCAAGTAAGACCACAGGG	37347646	True	NA	NA	False	NA	NA	NA	37353978	37368874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37354276_37359182_37359343_37360445_37360575_37368483
transcript_122081.nic	chr6	+	701	3	ISM	ENSG00000112130.17	ENST00000479516.1	1525	4	-168	1564	-75	145	5prime_fragment	FALSE	canonical	3	241	junction_1	7	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGGAATTGAGAACTAAAA	NA	False	NA	28	True	AATATA	-43	NA	37353903	37368683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_37354276_37360445_37360575_37368483
transcript_122082.known	chr6	+	4034	24	FSM	ENSG00000137200.13	ENST00000373451.9	4034	24	0	0	0	0	multi-exon	TRUE	canonical	3	114	junction_11	18.6546567720144	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGTGTGGCTCTGTGTT	37430344	True	NA	13	True	ATTAAA	-18	NA	37433220	37481508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37433378_37435623_37435763_37443998_37444151_37446290_37446450_37450250_37450344_37451805_37451878_37453046_37453142_37453239_37453313_37458611_37458811_37459565_37459685_37461548_37461646_37461969_37462103_37462828_37463009_37471020_37471078_37471846_37471905_37472418_37472488_37473469_37473602_37474523_37474647_37475320_37475413_37476125_37476195_37477591_37477640_37478408_37478522_37479146_37479256_37480012
transcript_122084.known	chr6	+	457	4	FSM	ENSG00000137200.13	ENST00000471097.1	457	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5252283899534	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTCTCTTGTGGAAGGAA	37430342	True	NA	NA	False	NA	NA	NA	37433218	37444083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37433378_37435623_37435763_37436308_37436383_37443998
transcript_122087.known	chr6	-	572	4	FSM	ENSG00000198937.9	ENST00000373408.4	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	34.08160142299	3342	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCGTCTGCTGAGTAAATG	-37496410	True	NA	NA	False	AATAAA	-15	NA	37499893	37482937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_37483290_37484809_37484863_37485099_37485195_37499821
transcript_122093.known	chr6	+	3138	6	FSM	ENSG00000156639.12	ENST00000287218.9	3138	6	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_1	10.9617516848358	621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTTTTCTTGTTTCAC	37817495	True	NA	15	True	ATTAAA	-15	NA	37819726	38154624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_37820017_37929958_37930000_38061592_38061776_38082391_38082458_38116571_38116740_38152234
transcript_122095.known	chr6	-	2016	6	FSM	ENSG00000124767.7	ENST00000373365.5	2016	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_3	106.558903898267	8496	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCATCATGTTCTT	-38661254	True	NA	0	True	AATAAA	-37	NA	38703145	38675924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_38677384_38682011_38682102_38682807_38682876_38684373_38684515_38686891_38686975_38702970
transcript_12210.known	chr1	+	1749	6	FSM	ENSG00000158793.14	ENST00000368007.8	1749	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	89.9444272870754	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCATGTCCCAGCCCCAT	161115422	True	NA	3	True	AATAAA	-13	NA	161118116	161121193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118552_161119133_161119389_161119508_161119613_161119818_161119953_161120106_161120233_161120498
transcript_122102.known	chr6	-	2018	2	FSM	ENSG00000112167.10	ENST00000229903.5	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTTTGTTGACTGATTTA	-39114253	True	NA	-1	True	ATTAAA	-28	NA	39115186	39104062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39105777_39114882
transcript_122105.known	chr6	-	3783	5	FSM	ENSG00000164626.9	ENST00000359534.4	3783	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	11.9451873154003	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGTGTGTGCTGTGTGT	-39225210	True	NA	-1	True	AATAAA	-20	NA	39229475	39188970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39191756_39194168_39194338_39194593_39194761_39195875_39195988_39228925
transcript_122107.known	chr6	-	1524	5	FSM	ENSG00000124780.14	ENST00000373231.9	1524	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.69258240356725	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGGGTTTTTCTGTCA	-39314178	True	NA	-3	True	AATAAA	-20	NA	39314419	39299000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39299738_39303956_39304132_39304494_39304656_39310892_39311008_39314083
transcript_122111.nic	chr6	-	586	4	NIC	ENSG00000164627.18	novel	2035	3	NA	NA	-24	-1672	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATAGTCATTTTGCTT	-39725333	True	NA	NA	False	CATAAA	-3	NA	39725432	39691649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_39691863_39714691_39714767_39720701_39720812_39725244
transcript_122113.known	chr6	+	2186	3	FSM	ENSG00000146122.17	ENST00000475489.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAT	39792208	True	NA	NA	False	NA	NA	NA	39792395	39862819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_39792466_39856246_39856471_39860927
transcript_122115.nnic	chr6	+	606	3	NNC	ENSG00000146122.17	novel	3871	26	NA	NA	-7067	0	intron_retention	FALSE	canonical	0	0	junction_1	3	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAAGGAAATTCTGCTG	NA	False	NA	NA	False	AATAAA	-3	NA	39841498	39861161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_39841647_39856246_39856471_39860927
transcript_122116.known	chr6	-	3358	11	FSM	ENSG00000124615.20	ENST00000373188.6	3358	11	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	13.9728307797669	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGACAATTTGTGATATA	NA	False	NA	NA	False	ATTAAA	-16	NA	39934551	39905058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39907118_39909039_39909103_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39927328_39927456_39934294
transcript_122121.known	chr6	-	2852	9	FSM	ENSG00000124615.20	ENST00000373195.7	2852	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	45.8768732587564	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCACCATCTAAGGGAA	-39931921	True	NA	-18	True	AATAAA	-19	NA	39934497	39905320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39907118_39909834_39909956_39912263_39912375_39912891_39913005_39913316_39913429_39913773_39913836_39916067_39916233_39925677_39925846_39934294
transcript_122123.known	chr6	-	420	1	FSM	ENSG00000180211.5	ENST00000325612.5	420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTCCAGTATATTTGT	NA	False	NA	-41	True	NA	NA	NA	39958833	39958413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_39958400_39958800
transcript_122128.nnic	chr6	-	797	4	NNC	ENSG00000204092.2	novel	554	2	NA	NA	-1883	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGGTGTTTCTACTT	-40348024	True	NA	NA	False	ATTAAA	-16	NA	40348034	40344343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_40344757_40346010_40346153_40346586_40346672_40347877
transcript_122129.nnic	chr6	+	876	3	NNC	ENSG00000204091.8	novel	856	2	NA	NA	-49029	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	NA	False	NA	6	True	AATAAA	-17	NA	40285745	40379887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_40285873_40337116_40337260_40379281
transcript_122130.nnic	chr6	+	848	3	NNC	ENSG00000204091.8	novel	856	2	NA	NA	-5871	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	1.5	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	40328823	True	NA	6	True	AATAAA	-17	NA	40328903	40379887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_40329003_40337116_40337260_40379281
transcript_122131.known	chr6	+	1098	3	FSM	ENSG00000204091.8	ENST00000451810.3	1098	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTGGGCTGATTGG	40334694	False	NA	6	True	AATAAA	-17	NA	40334774	40379887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_40335124_40337116_40337260_40379281
transcript_122132.nnic	chr6	-	788	3	NNC	ENSG00000204092.2	novel	554	2	NA	NA	-3125	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGGGTGTTTCTACTT	NA	False	NA	NA	False	ATTAAA	-16	NA	40349276	40344343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_40344757_40346010_40346153_40349043
transcript_122133.known	chr6	+	1165	2	FSM	ENSG00000204091.8	ENST00000373170.2	1165	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTGGGCTGATT	40378324	True	NA	4	True	AATAAA	-15	NA	40378336	40379885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_40378898_40379281
transcript_122134.nnic	chr6	-	417	3	NNC	ENSG00000226454.3	novel	421	3	NA	NA	-672	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTGTTTATTTGGCA	NA	False	NA	NA	False	TATAAA	-26	NA	40524635	40516335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_40516445_40517303_40517514_40524537
transcript_122135.known	chr6	+	1660	9	FSM	ENSG00000001167.15	ENST00000353205.5	1660	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	12.7567384154415	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCTGTGGTAATAATAAG	41070789	True	NA	NA	False	AATAAA	-20	NA	41072982	41097950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41073085_41079028_41079165_41084045_41084193_41089578_41089711_41090203_41090310_41091527_41091695_41092911_41093086_41094395_41094498_41097356
transcript_12214.known	chr1	-	954	6	FSM	ENSG00000158796.17	ENST00000463227.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	126.214103807776	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTCTGGCGTGACTACAT	-161132445	False	NA	NA	False	NA	NA	NA	161132476	161122332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130848_161132390
transcript_122140.known	chr6	-	3184	6	FSM	ENSG00000124596.17	ENST00000424266.7	3184	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	116.576841611016	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGATGTGGCTACCTTA	-41072345	False	NA	-20	True	AATAAA	-26	NA	41072356	41064771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072235
transcript_122141.known	chr6	-	1515	6	FSM	ENSG00000124596.17	ENST00000463088.5	1515	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	135.24407565583	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCTTATGAGTCTTC	-41071907	True	NA	-7	True	AATAAA	-13	NA	41072489	41066474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41068840_41068954_41070075_41070135_41071131_41071277_41071595_41071676_41072334
transcript_12215.known	chr1	-	1527	6	FSM	ENSG00000158796.17	ENST00000490843.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	136.331067625835	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTTATGAGAGCTCTTAA	-161129745	True	NA	NA	False	NA	NA	NA	161132667	161121786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161130814_161130844_161132550
transcript_122150.known	chr6	-	1188	5	FSM	ENSG00000124596.17	ENST00000628419.2	1188	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	117.020030336691	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGAGGTTCTGTGCTTATG	-41072566	False	NA	-8	True	AATAAA	-14	NA	41072577	41066792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41070075_41070135_41071131_41071277_41071595_41071676_41072318
transcript_122162.known	chr6	-	717	4	FSM	ENSG00000124596.17	ENST00000464633.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	149.87179706521	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTTGTGTTTTTTTGTGG	-41072523	False	127	NA	False	NA	NA	NA	41072534	41067145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41067438_41071131_41071277_41071595_41071676_41072334
transcript_122169.known	chr6	-	401	3	FSM	ENSG00000124596.17	ENST00000471367.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	97.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCTAAGAACCAAATGTTT	-41072309	False	NA	-8	True	AATAAA	-21	NA	41072320	41071040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41071277_41071595_41071676_41072235
transcript_122170.known	chr6	-	704	3	FSM	ENSG00000124596.17	ENST00000469104.5	704	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	90.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTGCTTTCTCTTCAAA	-41071908	True	NA	NA	False	NA	NA	NA	41072490	41070824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41071277_41071595_41071676_41072318
transcript_122171.known	chr6	-	422	2	FSM	ENSG00000124596.17	ENST00000467234.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTCTCTAGCTGAT	-41072552	False	NA	NA	False	ATTAAA	-18	NA	41072563	41071498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41071676_41072318
transcript_122174.known	chr6	-	983	5	FSM	ENSG00000095970.17	ENST00000373113.8	983	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTTGGGCATCATGAAA	NA	False	NA	NA	False	AATAAA	-26	NA	41163116	41158507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41158781_41158872_41159067_41159791_41159883_41161262_41161614_41163042
transcript_12218.known	chr1	-	964	5	FSM	ENSG00000158796.17	ENST00000464113.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	133.529959185196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCATCAAGCTGCTGGTA	-161129666	True	NA	NA	False	NA	NA	NA	161132588	161122241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161122524_161123074_161123222_161123838_161123947_161124137_161124527_161132550
transcript_122182.known	chr6	-	419	2	FSM	ENSG00000234753.6	ENST00000414386.6	453	2	34	0	-7	0	multi-exon	FALSE	canonical	3	17	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	-41545921	True	NA	-11	True	ATTAAA	-28	NA	41546176	41523894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41524226_41546088
transcript_122183.known	chr6	-	575	2	FSM	ENSG00000234753.6	ENST00000454812.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATCGCCAGACCTGCT	NA	False	NA	-11	True	ATTAAA	-28	NA	41548621	41523894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41524226_41548377
transcript_122184.known	chr6	-	404	2	FSM	ENSG00000234753.6	ENST00000439386.2	571	2	161	6	95	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGATATCGCCAGACCTG	-41545819	False	NA	-13	True	ATTAAA	-26	NA	41546074	41523896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41524226_41545999
transcript_122185.known	chr6	-	409	2	FSM	ENSG00000234753.6	ENST00000432751.1	409	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTGCATTGATATCGC	NA	False	NA	-21	True	ATTAAA	-18	NA	41547548	41523904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41524226_41547460
transcript_122186.known	chr6	+	703	5	FSM	ENSG00000112559.15	ENST00000432027.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.6255718937147	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCGACCTGGACTGC	41636866	False	NA	NA	False	NA	NA	NA	41636881	41653474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41636934_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_122187.known	chr6	+	1913	6	FSM	ENSG00000112559.15	ENST00000419164.6	1913	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.755567229343	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCTCAGGACTCATGA	41636628	True	NA	11	True	AATAAA	-18	NA	41637017	41654244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41637274_41638139_41638376_41638738_41638826_41646125_41646309_41649618_41649844_41653318
transcript_122188.known	chr6	-	2188	9	FSM	ENSG00000112561.19	ENST00000358871.6	2188	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	3.73329613076702	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGGTCCTGTCTCTTT	-41736192	True	NA	0	True	AGTAAA	-15	NA	41736259	41683977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41685079_41686089_41686238_41687093_41687170_41687752_41687810_41687907_41688029_41689730_41689812_41690662_41690918_41691000_41691236_41736145
transcript_122189.nnic	chr6	+	2214	3	FSM	ENSG00000214736.8_ENSG00000268745.1	ENST00000398884.7	637	3	19	-1596	-13	17	multi-exon	FALSE	canonical	3	618	junction_2	500.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTAATCACTAATT	41766969	True	NA	26	True	AATAAA	-27	NA	41787680	41791494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_12219.known	chr1	+	550	4	FSM	ENSG00000158793.14	ENST00000486962.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	102.032674505115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGACTTTATAACCCTT	161115419	True	NA	NA	False	NA	NA	NA	161118113	161119611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161118210_161118785_161118882_161119133_161119389_161119508
transcript_122192.nnic	chr6	+	2177	3	FSM	ENSG00000214736.8_ENSG00000268745.1	ENST00000398881.4	565	3	-13	-1599	-13	17	multi-exon	FALSE	canonical	3	986	junction_2	316.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTAATCACTAATT	41766969	True	NA	26	True	AATAAA	-27	NA	41787680	41791494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_122201.known	chr6	+	637	3	FSM	ENSG00000214736.8	ENST00000398884.7	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_2	500.5	7259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATTCTTTTAATAAGA	41766950	True	NA	34	True	AATAAA	-21	NA	41787661	41789898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789530
transcript_122202.known	chr6	+	565	3	FSM	ENSG00000214736.8	ENST00000398881.4	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	986	junction_2	316.5	7084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATTTTATTCTTTTAATA	41766982	True	NA	31	True	AATAAA	-18	NA	41787693	41789895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41787826_41789231_41789337_41789567
transcript_122206.known	chr6	-	2478	4	FSM	ENSG00000124641.16	ENST00000265350.9	2478	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_2	13.2748718344933	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTGGCCTCCTGATTT	-41917437	True	NA	-20	True	AATAAA	-15	NA	41921139	41905353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41907288_41909268_41909523_41916784_41916940_41921004
transcript_122207.known	chr6	-	932	4	FSM	ENSG00000124641.16	ENST00000409312.5	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	158.191866626153	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGACCTTGCCTCCTTTA	-41917417	True	NA	NA	False	NA	NA	NA	41921119	41906803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41907288_41909344_41909523_41916784_41916940_41921004
transcript_122208.known	chr6	-	1481	3	FSM	ENSG00000124641.16	ENST00000482361.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	162	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACTGTGGCCACACTT	-41917437	True	NA	NA	False	AAAAAG	-20	NA	41921139	41906195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41907288_41909268_41909523_41921004
transcript_122212.known	chr6	+	1718	7	FSM	ENSG00000112578.10	ENST00000230340.9	1718	7	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_1	13.4866188827626	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGTTTGGTGTAGTC	41919049	True	NA	18	True	GATAAA	-24	NA	41921498	41933046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41921831_41927373_41927537_41930131_41930271_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_122214.known	chr6	+	1153	6	FSM	ENSG00000112578.10	ENST00000489290.1	1153	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	76.5992167061779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGCAGTCCCCCGCGA	41919084	True	NA	NA	False	NA	NA	NA	41921533	41932655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_41921831_41927373_41927537_41930634_41930769_41931395_41931557_41931727_41931831_41932360
transcript_122216.known	chr6	-	2233	5	FSM	ENSG00000112576.13	ENST00000372987.8	2233	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	104.156132800714	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	-41938789	False	NA	-22	True	AATAAA	-15	NA	41941519	41934955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41940951
transcript_122217.known	chr6	-	2026	5	FSM	ENSG00000112576.13	ENST00000372991.9	2026	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	10.779030568655	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGGCTTCTTGGAT	-41939078	True	NA	-18	True	AATAAA	-19	NA	41941808	41934951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_41940369_41940586_41941451
transcript_122219.known	chr6	-	1843	4	FSM	ENSG00000112576.13	ENST00000415497.6	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	111.398184704938	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTGGCTTTGGCTTCTT	-42048867	False	NA	-22	True	AATAAA	-15	NA	42048894	41934955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_41936108_41936558_41936696_41937234_41937395_42048500
transcript_122233.nnic	chr6	+	652	6	NNC	ENSG00000137413.17	novel	2500	6	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	37.3823487758594	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGATTATCTTTCAT	42050471	False	NA	NA	False	AATAAA	-20	NA	42050493	42057786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42057671
transcript_122234.known	chr6	+	1066	6	FSM	ENSG00000137413.17	ENST00000482926.1	1066	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	38.5766768916142	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTTTTTTTAGAGGT	42047053	True	NA	NA	False	NA	NA	NA	42050538	42063759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42063185
transcript_122238.known	chr6	+	794	5	FSM	ENSG00000137413.17	ENST00000372978.7	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	4.12310562561766	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTATCTTTCATAAT	42050490	False	NA	NA	False	AATAAA	-23	NA	42050512	42057789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388
transcript_122240.nnic	chr6	+	830	5	NNC	ENSG00000137413.17	novel	794	5	NA	NA	-19	-3	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	41.3060225633018	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTCAGATTATCTTTCAT	42050471	False	NA	NA	False	AATAAA	-20	NA	42050493	42057786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056035_42057388
transcript_122243.known	chr6	+	719	4	ISM	ENSG00000137413.17	ENST00000372978.7	794	5	11	1438	0	-32	5prime_fragment	FALSE	canonical	3	91	junction_2	4.32049379893857	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTTTGTAAATAAAGTC	42047038	True	NA	NA	False	NA	NA	NA	42050523	42056351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951
transcript_122244.known	chr6	+	6678	9	FSM	ENSG00000137413.17	ENST00000372977.8	6678	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	35.9650437925495	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCATGGTTGTTGTATAG	42047038	True	NA	NA	False	AATAAA	-19	NA	42050523	42083272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42050587_42051356_42051514_42055530_42055630_42055951_42056015_42057388_42057514_42066311_42066460_42068464_42068608_42077099_42077240_42077532
transcript_122245.known	chr6	-	6385	5	FSM	ENSG00000188112.9	ENST00000341865.9	6385	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	27.3986769753578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGACGTCATACTTTTAG	-42137257	True	NA	NA	False	CATAAA	-20	NA	42142620	42101118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42103879_42104462_42107584_42110215_42110292_42128671_42128779_42142299
transcript_122246.known	chr6	-	894	3	FSM	ENSG00000188112.9	ENST00000356542.5	894	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	5.5	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCTCATG	-42137256	True	NA	54	True	AATAAA	-32	NA	42142619	42126376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42126844_42128671_42128779_42142299
transcript_122247.known	chr6	+	2520	3	FSM	ENSG00000048545.17	ENST00000679182.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	6	1008	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTGGCAAGCACGGTGAA	NA	False	NA	NA	False	NA	NA	NA	42178099	42181338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42178430_42178801_42178896_42179242
transcript_122260.known	chr6	-	2100	7	FSM	ENSG00000048544.6	ENST00000053468.4	2100	7	0	0	0	0	multi-exon	TRUE	canonical	3	749	junction_5	35.8685873091701	1344	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCTCAGTTGTTGAC	-42210826	True	NA	-10	True	ATTAAA	-26	NA	42217861	42206806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42208373_42208857_42208948_42210487_42210597_42211780_42211918_42214119_42214193_42214279_42214345_42217801
transcript_122267.nic	chr6	+	828	2	ISM	ENSG00000024048.11	ENST00000372903.6	2423	12	-74	46200	-41	-46200	5prime_fragment	FALSE	canonical	3	82	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTGTAATTATTCTTG	42563971	False	NA	NA	False	AATAAA	-14	NA	42563987	42574151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_42564398_42573733
transcript_122268.known	chr6	-	3001	3	FSM	ENSG00000112619.8	ENST00000230381.7	3001	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTGTTAAATGACTG	NA	False	NA	-2	True	ATTAAA	-19	NA	42722597	42696597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42698508_42704364_42704612_42721753
transcript_122269.known	chr6	-	1606	1	FSM	ENSG00000124659.7	ENST00000372876.2	1606	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATGGGTTTGTTTGGTGT	-42742684	True	NA	-39	True	AATAAA	-17	NA	42746103	42744497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42744500_42746100
transcript_122277.known	chr6	+	1702	6	FSM	ENSG00000146223.16	ENST00000397415.7	1702	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	196.820324153782	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATTGCTGCAGTCATTCA	42879181	True	NA	NA	False	NA	NA	NA	42879638	42887010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42879952_42880860_42881083_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_122278.known	chr6	+	4499	6	FSM	ENSG00000146223.16	ENST00000493763.7	4499	6	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	51.2109363319985	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATGTACCATGACATA	42879158	True	NA	29	True	AATAAA	-26	NA	42879615	42889900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973_42886084_42886255
transcript_122279.known	chr6	+	703	5	FSM	ENSG00000146223.16	ENST00000602561.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	55.7673739743947	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAGGGAAGTTTGGCGTC	42877413	True	NA	24	True	AATAAA	-21	NA	42879932	42886249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42879952_42880860_42880967_42883450_42883615_42884612_42884751_42885973
transcript_122280.known	chr6	-	557	1	FSM	ENSG00000221821.4	ENST00000408925.4	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	686	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCCCCAGAATGATTTT	-42889992	True	NA	-1	True	AATAAA	-17	NA	42890821	42890264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42890300_42890800
transcript_122302.known	chr6	+	1431	6	FSM	ENSG00000137161.18	ENST00000372836.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_2	84.1817082269064	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42919430	True	NA	50	True	NA	NA	NA	42929479	42939294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42929722_42934474_42934599_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_122317.nnic	chr6	+	1618	5	NIC	ENSG00000137161.18	novel	1431	6	NA	NA	-311	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_1	290.342900722577	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCTCTTGTTCTTT	42928878	True	NA	50	True	NA	NA	NA	42929168	42939294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_42929722_42935573_42935671_42937716_42937840_42938089_42938208_42938567
transcript_122338.known	chr6	-	653	2	FSM	ENSG00000287825.2	ENST00000667155.2	660	2	0	7	0	-7	multi-exon	FALSE	canonical	3	37	junction_1	0	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGGCTTGGTGGCTCAC	-42929367	False	NA	NA	False	AATAAA	-27	NA	42929457	42928286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42928647_42929164
transcript_122339.known	chr6	+	954	6	NNC	ENSG00000137161.18	novel	1431	6	NA	NA	-288	-1124	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	272.62575080135	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCGCCAACCACGTGCT	42928901	False	NA	NA	False	NA	NA	NA	42929191	42938170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_42929722_42934474_42934599_42935573_42935623_42935623_42935671_42937716_42937840_42938089
transcript_122340.known	chr6	-	421	1	FSM	ENSG00000181524.6	ENST00000326586.6	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3663	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCTAAGGCTGGAGTGCA	-42956713	True	NA	NA	False	AAAAAG	-34	NA	42956765	42956344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_42956300_42956800
transcript_122341.known	chr6	+	1076	6	FSM	ENSG00000124713.6	ENST00000372808.4	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	4.07921561087423	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTGTGTTTATTTATGT	42960528	True	NA	6	True	AATATA	-20	NA	42960753	42963880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42960974_42962211_42962340_42962761_42962879_42963071_42963215_42963327_42963450_42963534
transcript_12235.known	chr1	+	888	6	FSM	ENSG00000143222.12	ENST00000368003.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	856	junction_5	69.5258225409811	8203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGGTTCTCATTGGGA	161143167	True	NA	19	True	AATAAA	-18	NA	161153977	161158856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158120_161158212_161158411
transcript_122353.known	chr6	-	2018	4	FSM	ENSG00000124733.5	ENST00000244711.4	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	654.830936620709	2682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATAGGGACAAGGTGAG	-42992618	True	NA	NA	False	NA	NA	NA	43013946	43011142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013785
transcript_122354.known	chr6	-	1124	4	FSM	ENSG00000124733.5	ENST00000642748.1	1124	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	760.824260624985	2620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGCTTGGGGCACCGCT	-43014269	False	NA	-14	True	AATAAA	-16	NA	43014279	43012093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43014061
transcript_122356.known	chr6	+	2973	16	FSM	ENSG00000112640.16	ENST00000485511.6	2973	16	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_3	34.1701624227922	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	42978747	True	NA	22	True	AATAAA	-16	NA	42984569	43012342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006680_43006910_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_122357.known	chr6	+	2894	16	FSM	ENSG00000112640.16	ENST00000394110.7	2894	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	105.414609993112	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTGCCTTGATGTG	42978730	True	NA	22	True	AATAAA	-16	NA	42984552	43012342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_42984705_42989610_42989689_43006462_43006607_43006933_43007111_43007195_43007307_43007413_43007507_43007934_43008066_43008200_43008261_43008366_43008476_43008692_43008747_43009056_43009228_43009321_43009450_43010467_43010570_43010663_43010737_43010880_43010998_43011148
transcript_122358.known	chr6	-	1004	4	FSM	ENSG00000124733.5	ENST00000643776.1	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_3	291.088760804444	6985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACCGCTCCCTGCTTCCTT	-43013973	False	NA	-2	True	AATAAA	-28	NA	43013983	43012081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43012622_43012925_43013029_43013114_43013390_43013897
transcript_122359.known	chr6	+	1869	11	FSM	ENSG00000124702.19	ENST00000326974.9	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_3	62.3795639612846	2922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGTTGTGTGTTTTTGTGG	42992404	True	NA	23	True	ATTAAA	-10	NA	43014248	43021294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666
transcript_12236.known	chr1	+	617	5	FSM	ENSG00000143222.12	ENST00000483191.5	617	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	402.03731170129	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCTGCACAGGGAAGGGA	161143173	True	NA	NA	False	AAGAAA	-37	NA	161153983	161158682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161154121_161156949_161157018_161157253_161157318_161157616_161157694_161158411
transcript_122360.known	chr6	+	1494	12	NNC	ENSG00000124702.19	novel	1869	11	NA	NA	6	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_11	393.111785670511	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACGTGTTGTGTGTTTTTG	42992410	True	NA	20	True	ATTAAA	-7	NA	43014254	43021291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_43014349_43017133_43017347_43017518_43017696_43017852_43017969_43018144_43018217_43018342_43018557_43018632_43018720_43018862_43018972_43019091_43019166_43019287_43019367_43020666_43020726_43021091
transcript_122363.known	chr6	+	1183	7	FSM	ENSG00000124541.7	ENST00000244496.6	1183	7	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_4	26.1454266236628	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATTCTGTTTTTTGTG	43006473	True	NA	26	True	CATAAA	-18	NA	43021622	43029599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43021785_43024984_43025133_43025262_43025330_43026036_43026142_43027177_43027253_43027359_43027478_43029091
transcript_122370.known	chr6	+	2361	16	FSM	ENSG00000137171.15	ENST00000347162.10	2361	16	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	16.0549057923116	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43058558	True	NA	16	True	AATAAA	-17	NA	43059630	43075093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_122371.known	chr6	+	2602	16	FSM	ENSG00000137171.15	ENST00000479388.5	2602	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.4785312676291	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTGTGACTTGAGTCC	43059570	True	NA	12	True	AATAAA	-13	NA	43059882	43075089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43060183_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_122386.known	chr6	+	1251	6	FSM	ENSG00000137171.15	ENST00000458460.6	1251	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.9736659610103	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTTGTAAGGACAATAT	43058580	True	NA	NA	False	AATAAA	-22	NA	43059652	43067397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43059686_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995
transcript_12239.known	chr1	+	2315	14	FSM	ENSG00000143258.16	ENST00000368002.8	2315	14	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_11	65.4823703633456	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156574	True	NA	NA	False	AATAAA	-16	NA	161159499	161165723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_122392.known	chr6	-	5406	26	FSM	ENSG00000044090.13	ENST00000265348.9	5406	26	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_17	18.3596949865732	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACGTGTGTGTTTGGCGAC	-43053769	False	5527	NA	False	AATAAA	-20	NA	43053851	43037616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43038012_43038266_43038473_43038565_43038693_43038841_43038988_43040155_43040427_43040529_43040747_43040914_43041076_43042801_43042985_43043073_43043181_43043447_43043631_43044751_43044886_43045226_43045403_43045586_43045683_43045985_43046092_43046235_43046408_43046510_43046602_43046879_43047108_43048147_43048254_43048331_43048570_43049406_43049663_43049962_43050160_43050259_43050399_43050967_43051469_43051611_43051764_43052208_43052797_43053621
transcript_122408.known	chr6	-	905	2	FSM	ENSG00000112651.12	ENST00000487429.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTCAAGACCAGCCTGG	-43053894	True	NA	NA	False	NA	NA	NA	43059421	43057570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43058234_43059179
transcript_122411.known	chr6	-	409	1	FSM	ENSG00000272170.1	ENST00000606123.1	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGGATTATTTAATACTTT	-43074607	False	NA	1	True	ATTAAA	-23	NA	43074739	43074330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43074300_43074700
transcript_122412.known	chr6	-	1216	7	FSM	ENSG00000112651.12	ENST00000388752.8	1216	7	0	0	0	0	multi-exon	TRUE	canonical	1	202	junction_4	134.7772854255	2397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGTTCTGACTTTGG	-43053907	True	NA	-1	True	AATAAA	-15	NA	43059434	43054028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43054487_43055544_43055619_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_122413.known	chr6	-	570	3	FSM	ENSG00000112651.12	ENST00000489623.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	259	1324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTGTTACTGTGGTTTT	-43053907	True	NA	NA	False	AATAAA	-20	NA	43059434	43054234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43054487_43058064_43058234_43059285
transcript_122414.known	chr6	-	899	6	FSM	ENSG00000112651.12	ENST00000230413.9	899	6	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	223.333472636772	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTACTGTGGTTTTGTT	-43053867	True	NA	NA	False	AATAAA	-23	NA	43059394	43054231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43054487_43055896_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_122415.known	chr6	-	661	5	FSM	ENSG00000112651.12	ENST00000480286.1	661	5	0	0	0	0	multi-exon	FALSE	canonical	1	202	junction_2	160.877282423591	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAAGGAGTTGCCTGGGT	-43053879	True	NA	NA	False	AATATA	-18	NA	43059406	43055891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43056008_43056080_43056197_43056306_43056446_43058064_43058234_43059285
transcript_122416.known	chr6	+	2770	17	FSM	ENSG00000137171.15	ENST00000394056.6	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	28.4164757447154	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTTCTGTGACTTGAGT	43059582	True	NA	10	True	AATAAA	-11	NA	43059894	43075087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43060277_43060517_43060606_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_122417.known	chr6	+	2688	16	FSM	ENSG00000137171.15	ENST00000259708.7	2688	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.3273965360501	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGACTTGAGTCCTGAT	43058784	False	NA	16	True	AATAAA	-17	NA	43059856	43075093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43060239_43061310_43061594_43062916_43063148_43065619_43065702_43066305_43066526_43066995_43067084_43070353_43070456_43070691_43070866_43071274_43071375_43071566_43071620_43071851_43071923_43072146_43072256_43072823_43072965_43073222_43073339_43073901_43073966_43074621
transcript_122418.known	chr6	+	902	2	FSM	ENSG00000112655.16	ENST00000476760.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCACAGAGCCTCGAGGT	43066557	True	NA	NA	False	NA	NA	NA	43076306	43129617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43076568_43128976
transcript_122424.known	chr6	-	834	4	FSM	ENSG00000112667.13	ENST00000509253.5	834	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	518.33086816134	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTCTGTCTTGTGTGAG	-43218985	True	NA	-7	True	ATTAAA	-19	NA	43229453	43225630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229050
transcript_122426.known	chr6	-	654	4	FSM	ENSG00000112667.13	ENST00000230431.11	654	4	0	0	0	0	multi-exon	FALSE	canonical	3	1082	junction_1	18.4028983224563	5433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTCTTGTGTGAGTC	-43219013	True	NA	-5	True	ATTAAA	-21	NA	43229481	43225628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43225882_43226032_43226144_43226326_43226396_43229260
transcript_122427.known	chr6	-	796	3	FSM	ENSG00000112667.13	ENST00000393987.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_2	1	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTAACTTTCTGTCTTGTG	-43219010	True	NA	-11	True	ATTAAA	-15	NA	43229478	43225634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43226144_43226326_43226396_43229260
transcript_122438.known	chr6	-	991	8	FSM	ENSG00000146215.14	ENST00000372569.8	991	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	50.7004005136537	800	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTTCAACTCTTCTTTGG	-43305341	True	NA	-14	True	AATAAA	-14	NA	43308826	43305471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43305876_43306066_43306125_43306218_43306314_43306445_43306518_43307611_43307744_43307838_43307897_43308314_43308410_43308749
transcript_122440.nic	chr6	+	503	2	ISM	ENSG00000124574.15	ENST00000502549.1	478	4	-11	3869	-4	-3869	5prime_fragment	TRUE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGCCTTCTCTGAGTC	NA	False	NA	NA	False	NA	NA	NA	43427536	43428307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_43427700_43427967
transcript_122441.nic	chr6	+	551	2	ISM	ENSG00000124574.15	ENST00000372530.9	5043	22	6	22120	-1	-3869	5prime_fragment	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACCTGCCTTCTCTGAGTC	43427088	True	NA	NA	False	NA	NA	NA	43427546	43428307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_43427758_43427967
transcript_122442.known	chr6	+	2778	11	FSM	ENSG00000137221.14	ENST00000372444.6	2778	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	51.1457720637787	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43478086_43478233_43478658_43478719_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_122444.known	chr6	+	2751	11	FSM	ENSG00000137221.14	ENST00000372445.9	2751	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	53.4846707010523	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43502587_43502618_43503400_43503509_43503622_43503707_43504760
transcript_122445.nic	chr6	+	2675	10	NIC	ENSG00000137221.14	novel	2720	10	NA	NA	-3	0	intron_retention	FALSE	canonical	3	64	junction_3	26.9242192133201	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474748	True	NA	14	True	AATAAA	-15	NA	43477565	43506553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_43477629_43478086_43478233_43497880_43497978_43498974_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_122447.known	chr6	+	2665	10	FSM	ENSG00000137221.14	ENST00000372452.5	2665	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	23.0592366539252	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCCTAACTTGTCTTAAT	43474755	True	NA	14	True	AATAAA	-15	NA	43477572	43506553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43478086_43478233_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_122450.known	chr6	+	2572	9	FSM	ENSG00000137221.14	ENST00000436109.6	2572	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	45.9728180558904	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTAACTTGTCTTAATGAC	43474705	True	NA	17	True	AATAAA	-18	NA	43477522	43506556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43477629_43497880_43497978_43498977_43499101_43500743_43500773_43501525_43501688_43502282_43502350_43503400_43503509_43503622_43503707_43504760
transcript_12246.nic	chr1	+	2579	13	NIC	ENSG00000143258.16	novel	2315	14	NA	NA	8	0	intron_retention	TRUE	canonical	3	70	junction_1	56.1735900777422	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161159444	False	NA	NA	False	AATAAA	-16	NA	161159457	161165723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164943_161165028_161165144_161165356
transcript_122470.known	chr6	-	1444	9	FSM	ENSG00000137207.12	ENST00000506469.5	1444	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	160.450488858713	1463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTCCCCACCTACCCCT	-43507055	True	NA	-129	True	NA	NA	NA	43516941	43511927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516114_43516726
transcript_122471.known	chr6	-	1639	9	FSM	ENSG00000137207.12	ENST00000510102.5	1639	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	201.069639677401	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGAACTGCAGCGGCTG	-43516969	True	NA	-41	True	ATTAAA	-13	NA	43516985	43511839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515605_43515702_43515888_43516188_43516726
transcript_122472.known	chr6	-	1321	9	FSM	ENSG00000137207.12	ENST00000490447.6	1321	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	159.131971567627	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTCTTGGCCAGTCCTC	-43516956	False	NA	-72	True	NA	NA	NA	43516972	43512158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43512316_43512439_43512564_43512760_43512875_43513068_43513201_43513358_43513452_43513587_43513634_43515594_43515702_43515888_43516191_43516726
transcript_12251.known	chr1	+	2195	13	FSM	ENSG00000143258.16	ENST00000289865.12	2195	13	0	0	0	0	multi-exon	FALSE	non_canonical	1	45	junction_10	55.8440288263262	783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGCTTATTTGTATTT	161156553	True	NA	NA	False	AATAAA	-16	NA	161159478	161165723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161159679_161160619_161161241_161162037_161162098_161162269_161162391_161162614_161162727_161162918_161163075_161163554_161163620_161163877_161163982_161164163_161164251_161164533_161164613_161164834_161164943_161165028_161165144_161165356
transcript_122513.known	chr6	-	882	1	FSM	ENSG00000219470.1	ENST00000402069.1	882	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	-43539693	False	NA	NA	False	NA	NA	NA	43539703	43538821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43538800_43539700
transcript_122514.known	chr6	+	1275	9	FSM	ENSG00000171453.20	ENST00000642195.1	1275	9	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_4	17.1823856027037	3972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510712	True	NA	NA	False	AATAAA	-19	NA	43517088	43521513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_122515.known	chr6	+	1725	6	FSM	ENSG00000171453.20	ENST00000481352.6	1725	6	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	13.6967149346111	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAGATGTAAATAAACTCA	43510677	True	NA	NA	False	CATAAA	-28	NA	43517053	43521479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43520428_43520624_43520775_43520931
transcript_122516.known	chr6	+	1119	8	FSM	ENSG00000171453.20	ENST00000372344.6	1119	8	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	108.440898979253	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACTTTTTGAGACTA	43510711	True	NA	NA	False	AATAAA	-12	NA	43517087	43521506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520931_43521049_43521181
transcript_122517.known	chr6	+	569	3	FSM	ENSG00000171453.20	ENST00000512472.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	19	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGTACAATAATACATCC	43510706	True	NA	NA	False	NA	NA	NA	43517082	43519733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332
transcript_122518.known	chr6	+	1334	9	FSM	ENSG00000171453.20	ENST00000645141.1	1334	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	101.759520439122	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTGAGACTACTTTTGA	43510720	True	NA	NA	False	AATAAA	-19	NA	43517096	43521513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519906_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43521181
transcript_122519.known	chr6	+	1280	9	FSM	ENSG00000171453.20	ENST00000304004.7	1280	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	103.297431599242	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTATTAATAAGGGTC	43510712	True	NA	NA	False	AAAAAG	-17	NA	43517088	43529585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43519839_43520065_43520186_43520274_43520428_43520624_43520775_43520931_43521049_43529248
transcript_122520.known	chr6	+	1882	5	FSM	ENSG00000171453.20	ENST00000455605.2	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	16.1709616287962	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTCACCCAAACAAAAAAAC	43510756	True	NA	NA	False	CATAAA	-43	NA	43517132	43521494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43517179_43517305_43517378_43519332_43519441_43519705_43521049_43521181
transcript_122521.known	chr6	-	5323	32	FSM	ENSG00000124571.18	ENST00000265351.12	5323	32	0	0	0	0	multi-exon	FALSE	canonical	2	340	junction_9	49.2948190821862	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCATCTGCCTTTTTC	-43565697	True	NA	-3	True	AGTAAA	-22	NA	43576038	43522333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43524006_43524470_43524636_43524830_43524969_43525106_43525215_43525838_43525922_43526684_43526748_43527633_43527732_43528158_43528206_43528827_43528926_43530687_43530825_43531478_43531576_43533906_43534008_43546570_43546753_43547607_43547708_43548260_43548461_43549488_43549579_43549892_43549935_43551297_43551454_43553372_43553504_43555835_43555965_43558500_43558592_43560177_43560304_43560923_43561008_43562246_43562347_43565659_43565737_43567168_43567355_43568710_43568738_43570501_43570685_43570856_43570995_43572505_43572579_43573479_43573602_43575759
transcript_122523.known	chr6	+	8368	11	FSM	ENSG00000170734.12	ENST00000372236.9	8368	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	4.7549973711875	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTGTATTTAAATATA	43574298	True	NA	NA	False	AATAAA	-22	NA	43576184	43620523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43576441_43582315_43582457_43583006_43583142_43587271_43587490_43597695_43597866_43600987_43601092_43603891_43604012_43604614_43604739_43605253_43605320_43610553_43610724_43613659
transcript_122530.nnic	chr6	+	563	2	NNC	ENSG00000170734.12	novel	331	3	NA	NA	-19	-10088	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCTTCCTATTCTTGC	43574279	True	NA	NA	False	AGTAAA	-19	NA	43576165	43577312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_43576441_43577024
transcript_122535.known	chr6	+	1517	4	FSM	ENSG00000124688.14	ENST00000451025.6	1517	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	146.84761565045	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATAGATTCTTATTA	43629385	True	NA	-12	True	AATATA	-1	NA	43629539	43640919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43629770_43633193_43633316_43636380_43636647_43640020
transcript_122541.known	chr6	+	1269	3	FSM	ENSG00000124688.14	ENST00000372171.5	1269	3	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_2	10	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCTGAAATTGTTTTGA	43631811	True	NA	10	True	AATAAA	-16	NA	43635839	43640941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43635922_43636380_43636647_43640020
transcript_122545.known	chr6	+	2586	6	FSM	ENSG00000172426.16	ENST00000372165.8	2586	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAAGGCCCATCCTTCATT	43644997	True	NA	NA	False	AATAAA	-16	NA	43645045	43672599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43645326_43650374_43650541_43655606_43655692_43656576_43656724_43666423_43666521_43670788
transcript_122548.known	chr6	+	2545	5	FSM	ENSG00000172426.16	ENST00000372163.5	2545	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.92028643696715	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCCATCCTTCATTC	43644987	True	NA	NA	False	AATAAA	-17	NA	43645035	43672600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43645326_43650374_43650541_43655561_43655692_43656576_43656724_43670788
transcript_122567.known	chr6	-	1163	6	FSM	ENSG00000096080.12	ENST00000372133.8	1163	6	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_2	48.3793344311391	2011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCTGGTTGTCACCTT	-43681136	True	NA	NA	False	AAGAAA	-15	NA	43687791	43671201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43671907_43675201_43675272_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_122568.known	chr6	-	785	5	FSM	ENSG00000096080.12	ENST00000372116.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	316.065954351303	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGGGGACAGGAGTTTTG	-43681136	True	NA	-60	True	GGGGCT	-15	NA	43687791	43671509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_43671907_43675493_43675618_43678517_43678626_43681088_43681121_43687667
transcript_122569.known	chr6	+	993	7	FSM	ENSG00000112715.26	ENST00000230480.10	993	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	73.7015377496743	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TATATATATATAAAAATAAA	43771781	True	NA	NA	False	NA	NA	NA	43771991	43784935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_43772102_43774340_43774393_43777468_43777666_43778459_43778537_43778888_43778919_43781955_43782088_43784540
transcript_122577.nnic	chr6	-	401	2	NNC	ENSG00000237686.8	novel	1197	5	NA	NA	0	-1794	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATCTGCCACAAAGCCT	-44074642	True	NA	NA	False	AATAAA	-22	NA	44074655	44059750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_44059993_44074496
transcript_122596.known	chr6	-	957	3	FSM	ENSG00000180992.7	ENST00000372014.5	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_2	142.5	7827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATTTGTTTTTATTTTTC	-44114173	True	NA	-26	True	TATAAA	-23	NA	44127452	44113450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44114210_44116540_44116630_44127343
transcript_122598.known	chr6	+	828	2	FSM	ENSG00000262179.3	ENST00000573382.3	828	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGGCTTTGAAAGTCTA	44216691	True	NA	14	True	AATAAA	-19	NA	44216925	44218234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44216969_44217449
transcript_122600.known	chr6	+	2358	14	FSM	ENSG00000112759.19	ENST00000651428.1	2358	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	670.531609287179	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTTTCTTGTTTTTTTCTC	44218558	True	NA	61	True	TTTAAA	-4	NA	44219552	44234124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44219783_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122602.known	chr6	+	2283	14	FSM	ENSG00000112759.19	ENST00000371713.6	2283	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	694.769980240789	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44218641	True	NA	79	True	AATAAA	-18	NA	44219635	44234142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44219783_44221585_44221686_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122605.nic	chr6	+	2242	14	NIC	ENSG00000112759.19	novel	2083	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	225	junction_2	614.014175963409	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44201893	True	NA	79	True	AATAAA	-18	NA	44223542	44234142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_44223642_44226060_44226168_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122608.known	chr6	+	2301	14	FSM	ENSG00000112759.19	ENST00000371724.6	2301	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	671.081561018079	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCATGGCTCCCTGTGTCC	44223748	False	NA	78	True	AATAAA	-17	NA	44223799	44234141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44223956_44226060_44226168_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122609.known	chr6	+	1998	13	FSM	ENSG00000112759.19	ENST00000652680.1	1998	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	536.370207972068	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATACTCCATTCTCCCC	44218633	True	NA	100	True	NA	NA	NA	44219627	44233946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44219783_44227259_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122612.known	chr6	+	2083	13	FSM	ENSG00000112759.19	ENST00000371755.9	2083	13	0	0	0	0	multi-exon	FALSE	canonical	3	1262	junction_1	228.806990472076	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGGCTCCCTGTGTCCT	44201945	True	NA	79	True	AATAAA	-18	NA	44223594	44234142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44223642_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122621.known	chr6	+	2030	13	FSM	ENSG00000112759.19	ENST00000652453.1	2030	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	542.742111872665	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAACTCCCCATGCCCAGT	44223740	True	NA	-61	True	NA	NA	NA	44223791	44234002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44223926_44227262_44227343_44229389_44229472_44229588_44229792_44229906_44230047_44230346_44230482_44230567_44230666_44230810_44230890_44231363_44231462_44231997_44232107_44232342_44232429_44232806_44233007_44233416
transcript_122643.known	chr6	+	2674	12	FSM	ENSG00000096384.20	ENST00000371554.2	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4279.49636528597	8541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44247852	False	NA	33	True	AATAAA	-21	NA	44247865	44253883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44248080_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_12265.known	chr1	+	1150	5	FSM	ENSG00000143258.16	ENST00000492950.5	1150	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	65.8117580679927	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCCCAAGAGCTCACTGA	161159436	False	NA	NA	False	NA	NA	NA	161159449	161162368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161159679_161160365_161160507_161160619_161161241_161162037_161162098_161162269
transcript_122654.known	chr6	+	2555	12	FSM	ENSG00000096384.20	ENST00000371646.10	2555	12	0	0	0	0	multi-exon	FALSE	canonical	3	12779	junction_5	1192.07461356138	19005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTTTCCCTTGTGAA	44164685	True	NA	33	True	AATAAA	-21	NA	44247100	44253883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44247196_44248629_44248777_44249376_44249584_44249674_44249835_44250020_44250155_44250290_44250600_44251047_44251214_44251417_44251609_44251736_44251885_44251998_44252268_44253044_44253379_44253488
transcript_122655.known	chr6	-	2063	4	FSM	ENSG00000157593.19	ENST00000619636.4	2063	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	156.603533378614	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	-44255938	False	NA	-13	True	ATTAAA	-18	NA	44257352	44254101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257181
transcript_122656.known	chr6	-	2022	4	FSM	ENSG00000157593.19	ENST00000393812.4	2022	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	10.3387082795139	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCCTGTGTTTTGGTT	-44255058	True	NA	-12	True	ATTAAA	-19	NA	44257528	44254100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256341_44256497_44256684_44256879_44257399
transcript_122659.known	chr6	-	1909	3	FSM	ENSG00000157593.19	ENST00000538577.5	1909	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	162	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCCTGTGTTTTGGT	-44256157	False	NA	-13	True	ATTAAA	-18	NA	44257571	44254101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256684_44256879_44257399
transcript_122661.known	chr6	-	1859	3	FSM	ENSG00000157593.19	ENST00000495706.1	1859	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	172	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTTTGGTTGACTG	-44256140	False	NA	-7	True	ATTAAA	-24	NA	44257554	44254095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44255645_44256341_44256497_44257399
transcript_122662.known	chr6	-	2344	6	FSM	ENSG00000146232.17	ENST00000619360.6	2344	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	5.91269819963779	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGGTGCTATGAAGGG	-44264137	True	NA	-2	True	AATAAA	-17	NA	44265551	44258165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44259285_44260042_44260283_44260450_44260540_44261625_44261849_44262559_44262663_44264981
transcript_122664.known	chr6	-	4798	22	FSM	ENSG00000124608.5	ENST00000244571.5	4798	22	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_18	13.2526470209247	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGGCCCGCCTGGCATC	-44310695	True	NA	-20	True	AGTAAA	-14	NA	44313347	44298730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44300712_44301155_44301267_44301380_44301465_44302059_44302171_44302390_44302514_44302801_44302911_44303065_44303176_44303285_44303424_44304180_44304322_44304419_44304534_44304644_44304818_44305053_44305199_44305652_44305787_44306279_44306392_44306493_44306533_44306922_44307032_44307248_44307395_44310298_44310444_44310993_44311162_44311389_44311536_44312071_44312264_44313080
transcript_122667.known	chr6	+	6241	16	FSM	ENSG00000096401.8	ENST00000371477.4	6241	16	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_7	28.1862062403265	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCTTTTATGTTTA	44386147	True	NA	NA	False	ATTAAA	-19	NA	44387705	44450425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808_44404028_44406322_44406468_44408443_44408633_44419448_44419598_44422646_44422810_44424418_44424584_44426102_44426184_44426481_44426725_44429712_44429911_44445654_44445868_44446606
transcript_122676.nic	chr6	+	909	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-181	46546	-181	-46546	5prime_fragment	TRUE	canonical	3	255	junction_3	21.6554842938227	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGAGAGGAGTTGATTAT	44387489	False	NA	NA	False	AAGAAA	-8	NA	44387524	44403879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_122677.nic	chr6	+	1057	6	ISM	ENSG00000096401.8	ENST00000371477.4	6241	16	-181	46398	-181	-46398	5prime_fragment	FALSE	canonical	3	255	junction_3	21.6554842938227	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTTGCCTTTCTGATTT	44387489	False	NA	7	True	NA	NA	NA	44387524	44404027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_44387869_44390267_44390372_44392666_44392829_44393445_44393574_44396340_44396441_44403808
transcript_122685.nnic	chr6	-	1222	11	NNC	ENSG00000196284.17	novel	4211	11	NA	NA	-24	49	intron_retention	TRUE	non_canonical	0	0	junction_9	43.3544692044546	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGGAGTGGGCTGGTC	-45376288	True	NA	-8	True	AATAAA	-23	NA	45377977	44829717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45231448_45231566_45377823
transcript_122686.known	chr6	-	4211	11	FSM	ENSG00000196284.17	ENST00000371459.6	4211	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	10.590561835899	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTTACTTGTTTAGAAT	-45376245	True	NA	NA	False	AATAAA	-32	NA	45377934	44826725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45105921_45106007_45365200_45365302_45377767
transcript_122696.nnic	chr6	-	1037	9	NNC	ENSG00000196284.17	novel	3941	9	NA	NA	-70473	49	intron_retention	FALSE	canonical	0	0	junction_8	36.0347054934545	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGGGAGTGGGCTGGTC	-45176409	True	NA	-8	True	AATAAA	-23	NA	45176492	44829717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_44829858_44932652_44932764_44953309_44953418_44954494_44954608_44961752_44961829_45003652_45003793_45014800_45014892_45020545_45020633_45176321
transcript_122711.nnic	chr6	-	622	5	NNC	ENSG00000196284.17	novel	1377	12	NA	NA	243	-48644	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	4.03112887414927	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTAGTGTGATTTTTA	-45377679	False	NA	NA	False	ATTAAA	-27	NA	45377690	45299598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_45299748_45321795_45321892_45322878_45322968_45365200_45365302_45377503
transcript_122718.nnic	chr6	-	577	4	NNC	ENSG00000196284.17	novel	1377	12	NA	NA	-52	-48644	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	52.6012251652838	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTAGTGTGATTTTTA	-45377994	False	NA	NA	False	ATTAAA	-27	NA	45378005	45299598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_45299748_45322878_45322968_45365200_45365302_45377767
transcript_122721.nnic	chr6	-	1143	3	NNC	ENSG00000196284.17	novel	1377	12	NA	NA	-53	39908	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	54.5	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTTTGTGGAATGGTCAG	-45377995	False	NA	NA	False	AATAAA	-32	NA	45378006	45211046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_45211850_45365200_45365302_45377767
transcript_122722.nnic	chr6	-	744	3	NNC	ENSG00000196284.17	novel	1377	12	NA	NA	-52	39510	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	54.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGAATTTAGAGTCAT	-45377994	False	NA	NA	False	AATAAA	-19	NA	45378005	45211444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_45211850_45365200_45365302_45377767
transcript_122726.nic	chr6	-	521	3	NIC	ENSG00000196284.17	novel	396	3	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	57	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATGTGTAGTCCCAGC	-45377994	False	NA	NA	False	AATAAA	-18	NA	45378005	45250954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_45251137_45365200_45365302_45377767
transcript_122727.nnic	chr6	-	488	3	NNC	ENSG00000196284.17	novel	1377	12	NA	NA	-52	-48644	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	57	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTAGTGTGATTTTTA	-45377994	False	NA	NA	False	ATTAAA	-27	NA	45378005	45299598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_45299748_45365200_45365302_45377767
transcript_122729.known	chr6	-	900	4	FSM	ENSG00000231769.4	ENST00000444038.3	900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCTTAAGTGTACTAT	-46129784	True	NA	NA	False	AATAAA	-21	NA	46129831	46097056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46097347_46102539_46102660_46122947_46123110_46129503
transcript_122732.known	chr6	-	1817	3	FSM	ENSG00000231769.4	ENST00000669498.1	1817	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCAATTAAACCTCTT	NA	False	NA	NA	False	NA	NA	NA	46129857	46096003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46097347_46102539_46102660_46129503
transcript_122737.nnic	chr6	-	673	3	NNC	ENSG00000231769.4	novel	371	3	NA	NA	0	450	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTGCCTTGTATGAAG	NA	False	NA	NA	False	AATAAA	-21	NA	46129857	46102117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_46102403_46102539_46102660_46129589
transcript_122738.known	chr6	+	4644	4	FSM	ENSG00000001561.7	ENST00000321037.5	4644	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCAGTGTCACTGGTGATT	46129611	True	NA	4	True	AATAAA	-40	NA	46129988	46146688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_46130190_46139550_46140410_46141051_46141223_46143275
transcript_122742.known	chr6	-	3845	5	FSM	ENSG00000112796.10	ENST00000371383.7	3845	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.7662997272851	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATCATCATT	-46169517	True	NA	-4	True	AATAAA	-23	NA	46170980	46159184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170052_46170115_46170807
transcript_122746.known	chr6	-	2544	4	FSM	ENSG00000112796.10	ENST00000230565.3	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	6.84754619472471	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATCAAATTGGATAAAACA	-46169508	True	NA	NA	False	ATTAAA	-20	NA	46170971	46160414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46161754_46165386_46165564_46167433_46168298_46170807
transcript_122749.nic	chr6	-	1931	4	ISM	ENSG00000112796.10	ENST00000371383.7	3845	5	3	5544	3	228	5prime_fragment	FALSE	canonical	3	14	junction_3	27.0102861065105	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTTTTTACATACAG	-46169514	True	NA	NA	False	AAAAAG	-15	NA	46170977	46164728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170052_46170115_46170807
transcript_122752.nic	chr6	-	1893	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-30	4314	-21	228	5prime_fragment	FALSE	canonical	3	62	junction_2	7	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACAGTTTTTACATACAG	-46169538	True	NA	NA	False	AAAAAG	-15	NA	46171001	46164728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_122754.nic	chr6	-	1306	3	ISM	ENSG00000112796.10	ENST00000230565.3	2544	4	-30	4901	-21	-359	5prime_fragment	FALSE	canonical	3	62	junction_2	7	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCAGTTTATTGATTGA	-46169538	True	NA	-21	True	AATACA	-18	NA	46171001	46165315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_46165564_46167433_46168298_46170807
transcript_122758.known	chr6	-	2432	12	FSM	ENSG00000146233.8	ENST00000275016.3	2432	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	2.86038776773678	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	-46652550	True	NA	NA	False	AATATA	-18	NA	46652818	46549579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46639493_46639669_46642162_46642299_46652405
transcript_12276.known	chr1	+	1667	13	FSM	ENSG00000143224.18	ENST00000652473.1	1667	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	103.777673685411	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAACTCTCATTCATGA	161164247	True	NA	-23	True	NA	NA	NA	161166466	161171176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168412_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_122762.known	chr6	-	2269	11	FSM	ENSG00000146233.8	ENST00000619708.4	2269	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	3.87814388593306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACTGTAGTGGAATCTAT	-46652562	True	NA	NA	False	AATATA	-18	NA	46652830	46549579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46550438_46553766_46553855_46587076_46587166_46588033_46588130_46595986_46596121_46625417_46625509_46630962_46631071_46636388_46636483_46637828_46637979_46642162_46642299_46652405
transcript_122766.known	chr6	-	1915	12	FSM	ENSG00000146070.17	ENST00000274793.12	1915	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	11.1139849359726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTTGCAATGATACAAGA	-46734997	True	NA	NA	False	ATTAAA	-23	NA	46735375	46704200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735179
transcript_122767.known	chr6	-	1747	12	FSM	ENSG00000146070.17	ENST00000537365.1	1747	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	12.9007655612415	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGCCTAAATTTTAAT	NA	False	NA	NA	False	AATACA	-14	NA	46735693	46704316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_46704697_46705152_46705302_46707990_46708162_46709326_46709419_46710544_46710659_46711495_46711620_46712268_46712338_46714459_46714554_46716383_46716529_46716974_46717097_46722782_46722926_46735549
transcript_122776.nic	chr6	+	1517	9	NIC	ENSG00000153291.16	novel	2926	9	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_2	21.8056042108445	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTGTTGAAGGAAGGTG	46652239	True	NA	1	True	AATAAA	-14	NA	46652932	46677003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_46653299_46655842_46656035_46658961_46659047_46662375_46662499_46664773_46664887_46668708_46668794_46670134_46670228_46671125_46671229_46676646
transcript_122778.known	chr6	+	650	5	FSM	ENSG00000153291.16	ENST00000604616.1	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	6.96419413859206	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTGTTGAAGGAAGGTG	NA	False	NA	1	True	AATAAA	-14	NA	46664874	46677003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_46664887_46668708_46668794_46670134_46670228_46671125_46671229_46676646
transcript_122779.known	chr6	-	330	1	FSM	ENSG00000270761.1	ENST00000604014.1	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	272	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAGTCTCTTGTCAG	-47477497	False	NA	-23	True	AATAAA	-15	NA	47477572	47477242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_47477200_47477600
transcript_122780.known	chr6	+	5412	18	FSM	ENSG00000198087.7	ENST00000359314.5	5412	18	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_7	23.6698748576867	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACCCGTATGACTTT	47467700	True	NA	NA	False	AATAAA	-24	NA	47477788	47627263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_47478249_47503279_47503441_47533601_47533756_47544605_47544707_47554645_47554767_47574063_47574252_47576523_47576603_47577008_47577104_47579384_47579490_47580863_47580901_47582002_47582066_47595860_47596027_47599300_47599444_47606164_47606278_47607926_47608029_47609122_47609305_47612472_47612537_47624185
transcript_122789.known	chr6	-	803	3	FSM	ENSG00000286811.1	ENST00000661865.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATCTGCCCCCCCACCC	-48109262	False	NA	NA	False	AAAAAG	-7	NA	48111078	48069212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_48069927_48102126_48102186_48111048
transcript_122791.nnic	chr6	-	1790	3	NNC	ENSG00000286811.1	novel	803	3	NA	NA	-160	-28045	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTCTTTGTTAT	-48109422	True	NA	NA	False	AATAAA	-16	NA	48111238	48097257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_48098799_48102126_48102186_48111048
transcript_122792.nnic	chr6	-	740	3	NNC	ENSG00000286811.1	novel	803	3	NA	NA	-160	-29095	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGTTACTTTTCTCCAT	-48109422	True	NA	NA	False	AAAAAG	-35	NA	48111238	48098307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_48098799_48102126_48102186_48111048
transcript_122793.known	chr6	-	3811	13	FSM	ENSG00000146085.8	ENST00000274813.4	3811	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_12	28.2826753017147	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCTTGACAGTATCTTT	-49461029	True	NA	-9	True	AATAAA	-20	NA	49463253	49430359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463102
transcript_122804.nnic	chr6	-	2618	13	NNC	ENSG00000146085.8	novel	3811	13	NA	NA	-29	-1157	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_12	52.144763772491	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCTATACTCTCTATAAC	-49461058	True	NA	NA	False	AATAAA	-18	NA	49463282	49431516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_49431857_49435455_49435624_49440205_49440354_49441839_49441972_49444638_49444755_49447669_49447786_49448815_49448928_49451465_49451715_49453584_49453757_49456079_49456238_49457690_49458059_49459081_49459506_49463167
transcript_122808.known	chr6	+	1741	9	FSM	ENSG00000031691.7	ENST00000335783.4	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	29.1794019815349	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGACCTATAATATCAG	49461580	True	NA	78	True	AATAAA	-20	NA	49463369	49493107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_49463454_49470158_49470279_49470973_49471029_49472062_49472184_49472789_49472859_49480950_49481081_49488351_49488472_49488606_49488685_49492143
transcript_122820.known	chr6	+	442	2	FSM	ENSG00000197261.12	ENST00000424426.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGTGTTAGAAAGAAAACGA	49550998	False	NA	NA	False	NA	NA	NA	49551025	49552057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_49551291_49551880
transcript_122823.known	chr6	-	1365	10	FSM	ENSG00000124490.14	ENST00000339139.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTCTTAATGACCTTTC	NA	False	NA	NA	False	AATAAA	-20	NA	49713543	49692358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_49692901_49695835_49695925_49697859_49697958_49698361_49698508_49699803_49699892_49700667_49700785_49709130_49709206_49711284_49711322_49712500_49712605_49713474
transcript_122824.known	chr6	-	1376	9	FSM	ENSG00000124490.14	ENST00000616725.4	1376	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTTAATGACCTTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	49713590	49692357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_49692901_49695835_49695925_49697859_49697958_49698361_49698508_49699803_49699892_49700667_49700785_49709130_49709206_49712500_49712605_49713474
transcript_122825.known	chr6	-	549	3	FSM	ENSG00000214643.7	ENST00000639246.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCACTGTCCAGTCTGTG	NA	False	NA	NA	False	AATAAA	-15	NA	49950265	49946020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_49946226_49949216_49949386_49950090
transcript_122826.known	chr6	-	408	1	FSM	ENSG00000060303.5	ENST00000498293.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTTTCTGCAATGCTGTA	NA	False	NA	NA	False	NA	NA	NA	50857662	50857254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_50857300_50857700
transcript_122831.known	chr6	-	3068	17	FSM	ENSG00000112118.20	ENST00000596288.7	3068	17	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_6	184.466365074368	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAATAGTCATAGTGTGT	-52250135	True	NA	-11	True	AATAAA	-23	NA	52284742	52264014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_122838.known	chr6	-	3208	17	FSM	ENSG00000112118.20	ENST00000616552.4	3208	17	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_6	184.466365074368	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATAGTCATAGTGTGTT	NA	False	NA	-10	True	AATAAA	-24	NA	52284881	52264013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52264787_52266074_52266145_52266610_52266697_52267864_52267969_52269085_52269227_52272300_52272452_52273229_52273357_52273741_52273917_52276267_52276477_52277066_52277199_52277534_52277689_52278741_52278851_52279360_52279600_52282044_52282176_52282652_52282862_52283293_52283407_52284596
transcript_122845.known	chr6	+	6849	11	FSM	ENSG00000096093.16	ENST00000371068.11	6849	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.38435587980495	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAACTGACTCTCCATCCT	52419594	True	NA	NA	False	AATAAA	-30	NA	52420341	52497198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_122849.known	chr6	+	1829	10	FSM	ENSG00000096093.16	ENST00000636379.1	1829	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.4405515826241	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGATTGGTGCCTTA	52419631	True	NA	92	True	ACTAAA	-14	NA	52420378	52492503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_122852.known	chr6	+	2089	9	FSM	ENSG00000096093.16	ENST00000637263.1	2089	9	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.08147802758507	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTGTCATGTGTATT	52419566	True	NA	NA	False	CATAAA	-16	NA	52420313	52480139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639
transcript_122854.known	chr6	+	1896	6	FSM	ENSG00000096093.16	ENST00000637200.1	1896	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	26.0415053328336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCATATCAGTCATATAT	52419506	True	NA	NA	False	NA	NA	NA	52420253	52453543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52429968_52430132_52430227_52430375_52438303_52438592_52452687
transcript_122860.known	chr6	+	4004	10	FSM	ENSG00000096093.16	ENST00000637340.1	4004	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.08174763706845	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGGATCTAAGATTGGT	NA	False	NA	86	True	ACTAAA	-8	NA	52419742	52492497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52492269
transcript_122863.nnic	chr6	-	1133	2	Antisense	novelGene_ENSG00000096093.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAGTTTAACCTTTCA	-52420873	True	NA	NA	False	AAAAAG	-18	NA	52420980	52418087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_52418449_52420208
transcript_122865.known	chr6	+	2133	11	FSM	ENSG00000096093.16	ENST00000637089.1	2133	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	17.3043347170586	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACATACACTCCTTAAGTT	52419541	True	NA	1	True	AATAAA	-12	NA	52420288	52495768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52420474_52423945_52424168_52438303_52438592_52452687_52452838_52454094_52454288_52464894_52465116_52469332_52469474_52479036_52479251_52479639_52479788_52490139_52490351_52495608
transcript_122866.known	chr6	+	2744	3	FSM	ENSG00000225791.7	ENST00000663931.1	2744	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCTAAAATTGACTGAAAA	52576869	True	NA	-2	True	AATAAA	-8	NA	52577203	52583980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52578595_52579374_52579610_52582862
transcript_122867.known	chr6	+	1817	4	FSM	ENSG00000225791.7	ENST00000606558.6	1817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.1730755689881	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTGCTTTTTTATTATC	NA	False	NA	19	True	AATAAA	-29	NA	52576786	52584001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52576886_52578049_52578394_52579374_52579610_52582862
transcript_122868.known	chr6	+	3589	3	FSM	ENSG00000216775.4	ENST00000643631.2	3591	3	0	2	0	-2	multi-exon	FALSE	canonical	3	84	junction_2	19	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGTGTATTTTATTTT	NA	False	NA	2	True	AATAAA	-16	NA	52664365	52669153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52665420_52666388_52666519_52666748
transcript_122869.known	chr6	+	3757	2	FSM	ENSG00000216775.4	ENST00000602367.2	3757	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGTATTTTATTTTGT	52663885	True	NA	4	True	AATAAA	-18	NA	52664429	52669155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52665420_52666388
transcript_122873.known	chr6	+	988	5	FSM	ENSG00000096092.6	ENST00000211314.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_3	29.757352032733	1960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	52667794	True	NA	17	True	AATAAA	-18	NA	52671112	52686588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_52671246_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_122876.nnic	chr6	+	948	5	NNC	ENSG00000096092.6	novel	988	5	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	144.874730370759	193	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCTTTCATGTCAGT	52667764	True	NA	17	True	AATAAA	-18	NA	52671082	52686588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_52671176_52677086_52677173_52681812_52681915_52684077_52684166_52686009
transcript_122881.known	chr6	-	1221	7	FSM	ENSG00000244067.3	ENST00000493422.3	1221	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTGTCTGCTGTGGAT	NA	False	NA	NA	False	GATAAA	-31	NA	52763475	52750086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52750700_52751576_52751709_52752853_52752996_52754942_52755076_52756257_52756310_52757860_52757978_52763443
transcript_122882.known	chr6	-	1218	7	FSM	ENSG00000243955.6	ENST00000334575.6	1218	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.06718737290547	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGATTCTGTCTGCTGTG	-52803800	True	NA	NA	False	GATAAA	-28	NA	52803816	52791370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52791981_52792855_52792988_52794124_52794267_52796181_52796315_52797585_52797638_52799180_52799298_52803784
transcript_122884.nnic	chr6	-	1439	7	NNC	ENSG00000170899.11	novel	1240	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_6	54.5374489074556	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993428	True	NA	-8	True	AATAAA	-17	NA	52995343	52977952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994402_52995248
transcript_122891.known	chr6	-	859	4	FSM	ENSG00000170899.11	ENST00000370960.5	859	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.1973624701115	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGAGGCTGGTATTTAAG	-52992488	False	NA	NA	False	AGTAAA	-35	NA	52994403	52978254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52994156
transcript_122893.known	chr6	-	1240	7	FSM	ENSG00000170899.11	ENST00000370963.9	1240	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	17.410884207555	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993369	True	NA	-8	True	AATAAA	-17	NA	52995284	52977952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52985450_52985584_52987356_52987409_52994156_52994262_52995248
transcript_122894.known	chr6	-	1127	6	FSM	ENSG00000170899.11	ENST00000477599.5	1127	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	60.8624679092131	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCATTGTCTTGTTGTGAG	-52993389	True	NA	-8	True	AATAAA	-17	NA	52995304	52977952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_52978593_52982573_52982706_52984463_52984606_52987356_52987409_52994156_52994262_52995248
transcript_122896.known	chr6	+	1580	13	FSM	ENSG00000112146.17	ENST00000370939.7	1580	13	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_3	107.709356861675	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACCTAAGTTATAAATGTG	53064937	False	NA	NA	False	ATTAAA	-18	NA	53064997	53097888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_53065209_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_122897.known	chr6	+	4743	13	FSM	ENSG00000112146.17	ENST00000323557.12	4743	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	89.5530568992483	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCATACTTCTTGTAT	53062305	True	NA	6	True	AATAAA	-17	NA	53065403	53100873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_53065793_53071056_53071144_53073480_53073640_53076485_53076544_53078798_53078899_53080967_53081099_53082503_53082619_53092428_53092548_53092733_53092825_53093465_53093562_53093884_53093979_53095512_53095665_53097721
transcript_122907.known	chr6	-	6146	14	FSM	ENSG00000112144.16	ENST00000676107.1	6146	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	4.93628037142598	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGAGTGTTCTGTTT	-53060244	True	NA	NA	False	AATAAA	-19	NA	53061824	53001302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53005304_53006314_53006438_53009438_53009568_53011768_53011918_53012036_53012228_53013661_53013983_53016082_53016251_53018329_53018502_53019226_53019360_53031064_53031145_53032532_53032655_53037938_53037994_53041135_53041409_53061595
transcript_122911.known	chr6	-	2765	8	FSM	ENSG00000012660.14	ENST00000304434.11	2765	8	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	49.5889223969406	1747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGCCTGCATTTTACAT	-53333954	True	NA	-17	True	ATTAAA	-14	NA	53348950	53267403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53269271_53270592_53270728_53273219_53273345_53275089_53275262_53276178_53276257_53291775_53291964_53295641_53295708_53348816
transcript_122912.known	chr6	-	580	3	FSM	ENSG00000012660.14	ENST00000370913.5	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	394.5	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGAGATTTGTGTGTATT	-53333930	True	NA	-5	True	AATAAA	-32	NA	53348926	53294087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53294492_53295641_53295708_53348816
transcript_122913.known	chr6	-	3785	16	FSM	ENSG00000001084.13	ENST00000650454.1	3785	16	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_14	16.9383194758709	372	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTGTGTGTGAGTT	-53543237	True	NA	-4	True	AATAAA	-28	NA	53545101	53497340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53498968_53500044_53500166_53500246_53500351_53500431_53500514_53505391_53505497_53505802_53505896_53506912_53507026_53507479_53507619_53508594_53508712_53509175_53509251_53514203_53514338_53514438_53514498_53516108_53516223_53520777_53520961_53522414_53522528_53544495
transcript_122916.known	chr6	-	1782	6	FSM	ENSG00000227885.3	ENST00000666996.1	1782	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.16619037896906	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATAGGGTTTCTTTATT	-53794759	False	NA	NA	False	NA	NA	NA	53794840	53740630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53741339_53744218_53744365_53746515_53746604_53746908_53747014_53793282_53793350_53794172
transcript_122921.known	chr6	-	1213	4	FSM	ENSG00000227885.3	ENST00000648812.1	1213	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCTCAGCAGTTTTTTTT	-53793605	True	NA	NA	False	AATAAA	-1	NA	53793709	53745731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53793540
transcript_122922.known	chr6	-	514	4	FSM	ENSG00000227885.3	ENST00000662688.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	-53794238	False	NA	NA	False	AATAAA	-19	NA	53794319	53746408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53746604_53746908_53747014_53793282_53793350_53794172
transcript_122930.nnic	chr6	-	465	3	NIC	ENSG00000227885.3	novel	1213	4	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATATTTCAAAGATGT	-53793662	False	NA	NA	False	AATAAA	-19	NA	53793743	53746408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_53746604_53793282_53793350_53793540
transcript_122932.known	chr6	-	483	3	FSM	ENSG00000227885.3	ENST00000429053.1	483	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGGTCTAGAACCTGTT	-53794193	False	NA	NA	False	TATAAA	-43	NA	53794274	53790874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53791189_53793282_53793350_53794172
transcript_122936.known	chr6	-	3695	2	FSM	ENSG00000227885.3	ENST00000657329.1	3695	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAACATGTACTTGAAAAAAA	NA	False	NA	NA	False	AATAAA	-9	NA	53794904	53739265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_53741339_53793282
transcript_122943.known	chr6	-	4173	30	FSM	ENSG00000124749.17	ENST00000244728.10	4173	30	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_16	9.13278970524548	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTCTTTTTTTATA	-56247177	True	NA	NA	False	AATAAA	-18	NA	56247580	56056589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_56057845_56059164_56059243_56060017_56060219_56060740_56060796_56060890_56061038_56061648_56061682_56064577_56064623_56067294_56067331_56069045_56069118_56070744_56070799_56074231_56074286_56075478_56075533_56077528_56077574_56101471_56101526_56124061_56124116_56124238_56124293_56125566_56125621_56126095_56126150_56141784_56141839_56141929_56141984_56156886_56156950_56164422_56164507_56164813_56164823_56166905_56166984_56168123_56168298_56170648_56170866_56170959_56171129_56179577_56180130_56182530_56182657_56247386
transcript_122944.known	chr6	-	3547	22	FSM	ENSG00000151914.22	ENST00000518935.5	3547	22	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_21	5.19418827505653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAAGGCCTAAGATTT	-56642848	False	NA	NA	False	AATAAA	-28	NA	56642860	56624372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_56624629_56625156_56625265_56627203_56627288_56627998_56628162_56629249_56629444_56630244_56630384_56631210_56631390_56631882_56632041_56632853_56633038_56634131_56634259_56634461_56634617_56634800_56634954_56635588_56635715_56636556_56636653_56639258_56639364_56639449_56639612_56639695_56639774_56639928_56640058_56640142_56640606_56641946_56642102_56642409_56642504_56642621
transcript_122950.known	chr6	+	2789	4	FSM	ENSG00000168116.14	ENST00000370733.5	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_3	21.9544984001001	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTGGCTCTTGTCTTT	57044165	True	NA	24	True	AATAAA	-25	NA	57046692	57055225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57046777_57047312_57047397_57050773_57050855_57052685
transcript_122956.known	chr6	+	2883	3	FSM	ENSG00000168116.14	ENST00000545356.5	2883	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_2	123.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTCTCATTTCCATATC	57045053	True	NA	38	True	AATAAA	-39	NA	57046531	57055239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57046777_57047312_57047397_57052685
transcript_122958.known	chr6	+	5088	15	FSM	ENSG00000112200.17	ENST00000370706.9	5088	15	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	27.9884269085693	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTTATCTTTTCATTAC	57082201	True	NA	8	True	AGTAAA	-20	NA	57090187	57170305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57150718_57150863_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_122967.known	chr6	+	375	4	FSM	ENSG00000112200.17	ENST00000370710.10	375	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	136.587782111806	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCCCTTTAACCTTGTC	57082220	False	NA	NA	False	NA	NA	NA	57090206	57099610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57099468
transcript_122969.known	chr6	+	9478	4	FSM	ENSG00000112200.17	ENST00000370708.8	9478	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	122.956180089584	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTCTTTTCTCAAGTAC	57082089	True	NA	NA	False	ATTAAA	-20	NA	57090075	57109716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57100602
transcript_122970.nic	chr6	+	544	4	ISM	ENSG00000112200.17	ENST00000444273.6	3402	11	-115	26536	-12	312	5prime_fragment	FALSE	canonical	3	222	junction_3	33.9705755029261	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGAAGAATAGAGCATT	NA	False	NA	-16	True	NA	NA	NA	57089997	57124835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733
transcript_122976.known	chr6	+	4998	14	FSM	ENSG00000112200.17	ENST00000357489.7	4998	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	67.9008152385461	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGACTTTAATTTAG	57089922	False	NA	14	True	ATTAAA	-17	NA	57090029	57170201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57090275_57090810_57090895_57099060_57099142_57124733_57124860_57128728_57128841_57133041_57133193_57134743_57134871_57141301_57141456_57141947_57142096_57147089_57148694_57152220_57152352_57153860_57154048_57161083_57161153_57168422
transcript_122977.known	chr6	-	4830	7	FSM	ENSG00000112210.12	ENST00000468148.6	4830	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_6	14.9071198499986	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTGATATGTATGAT	-57221502	True	NA	0	True	AATAAA	-19	NA	57222307	57186991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57190601_57193841_57193935_57194769_57194853_57196449_57196607_57207627_57207714_57210225_57210446_57221725
transcript_122978.known	chr6	+	2561	16	FSM	ENSG00000146143.19	ENST00000672107.1	2561	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	62.3397144683868	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314313	True	NA	12	True	AATAAA	-13	NA	57317629	57646850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57398004_57398123_57402128_57402269_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_122982.known	chr6	+	2303	14	FSM	ENSG00000146143.19	ENST00000615550.5	2303	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_8	23.5193487008805	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACAGTGTCTGCGTATA	57314313	True	NA	12	True	AATAAA	-13	NA	57317629	57646850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57601092_57601220_57606374_57606458_57632132_57632202_57645927
transcript_122988.nic	chr6	+	1287	11	NIC	ENSG00000146143.19	novel	2303	14	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_10	44.7660585711988	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGGTCTTTTCTTGCC	57317532	False	NA	NA	False	ATTAAA	-16	NA	57317559	57587111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030_57382169_57507386_57507455_57532410_57532484_57537439_57537626_57586995
transcript_122992.known	chr6	+	2197	7	FSM	ENSG00000146143.19	ENST00000419977.4	2197	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	9.67815409397198	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCATGTGGGATGAAG	57314311	True	NA	NA	False	AAAAAG	-27	NA	57317627	57383589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57379900_57379997_57382030
transcript_122995.known	chr6	+	1266	6	FSM	ENSG00000146143.19	ENST00000671770.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.7598392985224	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTGTCCTGTTATTTA	57314313	True	NA	NA	False	AATAAA	-17	NA	57317629	57378976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924_57326046_57378250
transcript_122997.known	chr6	+	864	5	FSM	ENSG00000146143.19	ENST00000274891.10	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	2.8613807855649	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACAAGTGGTAGTTTCTT	57314307	True	NA	NA	False	AATAAA	-19	NA	57317623	57326363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57317702_57318436_57318600_57320456_57320561_57324200_57324281_57325924
transcript_122999.known	chr6	+	410	3	FSM	ENSG00000146143.19	ENST00000490313.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCATTGAATTTTATGAC	57379928	True	NA	NA	False	AATAAA	-15	NA	57379946	57435192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57379997_57382030_57382169_57434970
transcript_123001.known	chr6	+	1779	3	FSM	ENSG00000225096.3	ENST00000420759.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGCACTTTCTGTTTTAT	57961518	True	NA	NA	False	AATAAA	-14	NA	57961529	57973597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_57961743_57971594_57971657_57972093
transcript_123007.known	chr6	-	1666	6	FSM	ENSG00000215190.9	ENST00000418368.1	1666	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	8.95767827062348	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	-57960763	True	NA	-5	True	AATAAA	-20	NA	57961380	57946077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57947178_57948872_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_123009.known	chr6	-	1088	5	FSM	ENSG00000215190.9	ENST00000418765.6	1088	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8.95823643358446	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGACAAGCCTGCCCTCTC	-57960807	True	NA	NA	False	NA	NA	NA	57961424	57946546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57947178_57948872_57949069_57959027_57959112_57961151_57961225_57961320
transcript_123013.known	chr6	-	181	3	FSM	ENSG00000215190.9	ENST00000635948.1	181	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGAAGTTCAGATATTT	-57960728	True	NA	NA	False	AAAACA	-4	NA	57961345	57959028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57959112_57961151_57961225_57961320
transcript_123014.known	chr6	-	1621	6	FSM	ENSG00000215190.9	ENST00000399751.6	1621	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10.3266645147405	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTACTTTGTCTTTCTC	-57960763	True	NA	-5	True	AATAAA	-20	NA	57961380	57946077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_57947178_57948917_57949069_57949858_57950012_57959027_57959112_57961151_57961225_57961320
transcript_123019.known	chr6	+	4628	6	FSM	ENSG00000285976.2	ENST00000370651.7	4628	6	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_4	46.2540809010405	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGATTTTATTTTCAG	63564065	True	NA	6	True	AATAAA	-17	NA	63572471	63583587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63572720_63576435_63576986_63578436_63578530_63578897_63579029_63579256_63579332_63580056
transcript_123021.known	chr6	+	18797	16	FSM	ENSG00000118482.12	ENST00000262043.8	18797	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	30.2268460515189	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATACTTTATTTCATAT	63632931	True	NA	NA	False	ATTAAA	-15	NA	63635801	63726011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63646526_63646796_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222_63698368_63698448_63698606_63700349_63700467_63702507_63702640_63703535_63703672_63706028_63706225_63706728_63706877_63709150_63709241_63711166_63711363_63711585
transcript_123026.known	chr6	+	2787	6	FSM	ENSG00000118482.12	ENST00000481385.6	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	23.9332404826425	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAGAAAGTTGAAAA	63632952	True	NA	13	True	NA	NA	NA	63635822	63698245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_63636151_63679999_63680162_63684128_63685912_63691736_63692044_63694580_63694765_63698222
transcript_123032.nnic	chr6	+	841	3	NIC	ENSG00000285838.2	novel	1433	3	NA	NA	-21	-22287	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTCTTGATATTTCATT	68040256	False	NA	NA	False	AATAAA	-22	NA	68040268	68060505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_68040599_68040840_68040942_68060095
transcript_123033.known	chr6	+	1433	3	FSM	ENSG00000285838.2	ENST00000647954.1	1433	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAGAGATGTTCATATT	68040277	False	NA	NA	False	NA	NA	NA	68040289	68083574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_68040599_68040840_68040942_68082551
transcript_123036.known	chr6	-	888	4	FSM	ENSG00000230910.5	ENST00000667769.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTGCTTTCATTGGTCT	-68634974	False	NA	NA	False	ATTAAA	-21	NA	68634993	68632662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_68633057_68634184_68634259_68634464_68634725_68634833
transcript_123037.known	chr6	-	4099	4	FSM	ENSG00000230910.5	ENST00000663846.2	4345	4	246	0	-18	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTACCTTCACCCATT	-68634871	False	NA	NA	False	ATTAAA	-2	NA	68634890	68627878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_68628591_68630269_68630466_68630571_68633057_68634184
transcript_123042.known	chr6	-	3900	16	FSM	ENSG00000168216.13	ENST00000649934.3	3900	16	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	28.4498779532629	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTCTGTGGCATTTTGT	-69794745	True	NA	NA	False	AATAAA	-19	NA	69797010	69674009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_123048.known	chr6	-	2358	17	FSM	ENSG00000168216.13	ENST00000649673.1	2358	17	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	87.9783132013225	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTATCTGTGCCTTAGG	-69794631	True	NA	-26	True	AATAAA	-3	NA	69796896	69675819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_69676272_69676449_69676542_69697562_69697642_69699042_69699193_69700764_69700870_69701442_69701546_69701888_69701954_69708849_69709232_69713644_69713798_69718955_69719082_69737941_69738016_69741788_69741878_69749340_69749409_69752258_69752357_69780493_69780555_69790295_69790473_69796812
transcript_123049.known	chr6	-	3051	32	FSM	ENSG00000112280.18	ENST00000320755.12	3051	32	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_14	10.5700182667888	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTCTATAGGTGTATGT	-70282288	True	NA	-10	True	ATTAAA	-14	NA	70283209	70216039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_70217082_70225931_70226010_70232582_70232772_70234538_70234594_70234793_70234941_70239253_70239287_70240688_70240734_70241418_70241455_70241963_70242036_70242661_70242716_70252119_70252174_70252261_70252316_70253384_70253430_70254475_70254530_70254962_70255017_70255149_70255204_70255336_70255391_70256767_70256822_70260656_70260711_70263243_70263298_70266716_70266771_70268803_70268861_70269632_70269666_70270313_70270368_70271654_70271709_70272064_70272089_70274046_70274083_70274718_70274773_70280811_70280875_70281003_70281040_70281389_70281465_70282980
transcript_123055.known	chr6	+	401	3	FSM	ENSG00000237643.3	ENST00000418403.3	404	3	3	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGAGTCTGTGAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	70394882	70399417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70395044_70395229_70395267_70399214
transcript_123056.known	chr6	+	406	3	FSM	ENSG00000237643.3	ENST00000671572.1	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGATGAGTCTGTGAGCT	NA	False	NA	NA	False	AATAAA	-17	NA	70394880	70399417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70395044_70395226_70395267_70399214
transcript_123057.nnic	chr6	+	1800	14	NNC	ENSG00000082269.17	novel	6215	22	NA	NA	-11	4657	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	44.5948228480849	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTGTGTAAGGCACTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	70413409	70509617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70486166_70486245_70491033_70491084_70502635_70502792_70509436
transcript_123065.nic	chr6	+	2049	10	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-71	77694	-1	-21995	5prime_fragment	FALSE	canonical	3	89	junction_2	23.7445250349592	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAATCTGTATTCTT	70407441	True	NA	NA	False	AATAAA	-21	NA	70413506	70482965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000
transcript_123070.nic	chr6	+	1234	9	ISM	ENSG00000082269.17	ENST00000361499.7	5042	22	-80	79491	-10	-23792	5prime_fragment	FALSE	canonical	3	89	junction_2	24.0935676063135	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGGTTCTAATTGTCT	70407432	True	NA	NA	False	ATTAAA	-15	NA	70413497	70481168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900
transcript_123079.nnic	chr6	+	902	3	NNC	ENSG00000082269.17	novel	595	4	NA	NA	-11	-8969	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	66.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATACCCTTTACCAT	NA	False	NA	NA	False	AATAAA	-19	NA	70413409	70417802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70413703_70415290_70415377_70417279
transcript_123081.nic	chr6	+	1271	3	ISM	ENSG00000082269.17	ENST00000514185.5	529	5	553	799	-14	774	internal_fragment	FALSE	canonical	3	44	junction_2	49	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTAATATTGTAAAA	70407428	True	NA	NA	False	NA	NA	NA	70413493	70427545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70413703_70415290_70415377_70426569
transcript_123084.known	chr6	+	6215	22	FSM	ENSG00000082269.17	ENST00000418814.7	6215	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_10	33.7638860322683	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGTAATCCTTTGCTTA	70407442	True	NA	22	True	AATAAA	-34	NA	70413507	70561174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70413703_70415290_70415377_70426438_70426533_70428303_70428420_70452491_70452572_70475409_70475550_70475662_70475734_70477158_70477333_70480900_70481028_70482000_70482155_70491033_70491084_70502635_70502792_70522512_70522587_70523966_70524122_70524342_70526699_70528291_70528453_70533159_70533252_70533756_70533855_70536259_70536412_70538290_70538402_70556749_70556864_70559715
transcript_12310.nic	chr1	+	1542	11	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	26	junction_3	104.699617955368	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166337	False	NA	19	True	AATAAA	-16	NA	161166365	161171218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_123100.nnic	chr6	+	719	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	85.7139947085007	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562173	True	NA	15	True	AATAAA	-16	NA	70566894	70589569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588711_70589209
transcript_123104.nnic	chr6	+	751	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562173	True	NA	15	True	AATAAA	-16	NA	70566894	70589569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588859_70589325
transcript_123108.nnic	chr6	+	725	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.7935904666301	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562173	True	NA	15	True	AATAAA	-16	NA	70566894	70589569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588884_70589376
transcript_123111.nnic	chr6	+	894	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.7935904666301	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562173	True	NA	15	True	AATAAA	-16	NA	70566894	70589569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588961_70589284
transcript_123114.nnic	chr6	+	920	4	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.7935904666301	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562173	True	NA	15	True	AATAAA	-16	NA	70566894	70589569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70567005_70579413_70579567_70588614_70588987_70589284
transcript_123122.nnic	chr6	+	470	3	NNC	ENSG00000154079.6	novel	1183	3	NA	NA	-22	-3775	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	100.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCACGGTAAATTCTGTA	70562173	True	NA	7	True	AATAAA	-20	NA	70566894	70585794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_70567005_70579413_70579567_70585587
transcript_123123.known	chr6	+	1183	3	FSM	ENSG00000154079.6	ENST00000370474.4	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	29.5	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTGTTGCTGCGTGCT	70562208	True	NA	15	True	AATAAA	-16	NA	70566929	70589569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70567005_70579413_70579567_70588614
transcript_123125.known	chr6	+	332	2	FSM	ENSG00000154079.6	ENST00000468640.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATAATTTTATTTATTTA	70562195	True	NA	62	True	AATACA	-23	NA	70566916	70567659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70567005_70567415
transcript_123126.known	chr6	+	2403	10	FSM	ENSG00000112305.15	ENST00000316999.9	2403	10	0	0	0	0	multi-exon	TRUE	canonical	3	178	junction_8	33.996731869075	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTCATTTGTGGGTTT	70664220	True	NA	14	True	ATTAAA	-14	NA	70667775	70861166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349_70773426_70798656_70798738_70836940_70837029_70852539_70852665_70856858_70857031_70857921_70858230_70860199
transcript_123130.nic	chr6	+	555	4	ISM	ENSG00000112305.15	ENST00000370452.7	2491	11	107	87741	0	-18344	5prime_fragment	FALSE	canonical	3	249	junction_1	13.9283882771841	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAAACCTTCATCTC	70664327	True	NA	NA	False	GATAAA	-22	NA	70667882	70773425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_70668142_70732377_70732512_70754979_70755066_70773349
transcript_123131.known	chr6	+	8016	7	FSM	ENSG00000119900.9	ENST00000650315.1	8016	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.1494930412048	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTAAAATATTTTTAAAGA	71290622	False	NA	NA	False	NA	NA	NA	71291317	71308919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_71291339_71293292_71293380_71293529_71293612_71296316_71296396_71296494_71296562_71296671_71296818_71301385
transcript_123134.nnic	chr6	+	442	3	NIC	ENSG00000185760.18	novel	1001	5	NA	NA	281	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATCGTATTTTTTATA	72622448	True	NA	NA	False	AATAAA	-19	NA	72622470	72678558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_72622588_72677094_72677215_72678353
transcript_123137.nnic	chr6	-	1706	6	NNC	ENSG00000135314.13	novel	1430	5	NA	NA	-60	0	intron_retention	FALSE	canonical	0	0	junction_3	14.4968962195361	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	NA	False	NA	-3	True	AATAAA	-22	NA	73310425	73241313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73241729_73242054_73242238_73242405_73242531_73275490_73275557_73291997_73292041_73309551
transcript_123140.nic	chr6	-	1141	6	NIC	ENSG00000135314.13	novel	1430	5	NA	NA	-138	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_5	14.2772546380598	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	NA	False	NA	-3	True	AATAAA	-22	NA	73310503	73241313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551_73309729_73310305
transcript_123144.known	chr6	-	1430	5	FSM	ENSG00000135314.13	ENST00000370384.7	1430	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	9.75640815054393	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73310200	False	NA	-3	True	AATAAA	-22	NA	73310215	73241313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73291997_73292041_73309551
transcript_123152.known	chr6	-	1134	4	FSM	ENSG00000135314.13	ENST00000257765.9	1134	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	10.8012344973464	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCGATGTACTGTCCTT	-73263124	True	NA	-3	True	AATAAA	-22	NA	73263184	73241313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73241729_73242054_73242238_73242405_73242531_73262773
transcript_123158.nnic	chr6	-	1473	4	NNC	ENSG00000135314.13	novel	2053	3	NA	NA	-4	269	intron_retention	FALSE	canonical	0	0	junction_1	18.5532267334343	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGGCACTGTATTAGTC	-73310147	True	NA	-8	True	AATAAA	-14	NA	73310369	73274776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73275323_73275490_73275557_73291997_73292041_73309551
transcript_123160.known	chr6	+	1083	3	FSM	ENSG00000229852.4	ENST00000442007.1	1083	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCAGGCTTTGTAGCAT	73262914	True	NA	NA	False	AAAAAG	-24	NA	73263214	73276517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73263417_73270397_73270528_73275766
transcript_123163.known	chr6	-	2053	3	FSM	ENSG00000135314.13	ENST00000484801.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	8.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTAGTGGCTATTATTGTC	-73309216	True	NA	NA	False	AATAAA	-12	NA	73310143	73274138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73275557_73291997_73292041_73309551
transcript_123171.known	chr6	-	659	3	FSM	ENSG00000203909.4	ENST00000370370.4	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	2.5	826	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCAGTGTGGTTGATGG	-73353355	True	NA	NA	False	AATAAA	-17	NA	73354276	73353062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73353379_73353852_73354033_73354113
transcript_123172.known	chr6	+	1037	3	FSM	ENSG00000203908.4	ENST00000370367.4	1037	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACGTCTGTATTTTGGAA	73362622	True	NA	2	True	AATAAA	-14	NA	73362657	73364171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73362899_73363094_73363275_73363555
transcript_123175.known	chr6	-	1007	4	FSM	ENSG00000203907.10	ENST00000370363.5	1007	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCCACTCATGTT	-73395045	True	NA	NA	False	AATAAA	-15	NA	73395093	73368554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73368864_73369205_73369386_73394345_73394489_73394718
transcript_123178.nic	chr6	-	1323	3	ISM	ENSG00000203907.10	ENST00000370363.5	1007	4	-86	0	-46	0	intron_retention	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGACTCCCACTCATGTT	-73395131	True	NA	NA	False	AATAAA	-15	NA	73395179	73368554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_73368864_73369205_73369386_73394345
transcript_123179.known	chr6	+	2430	17	FSM	ENSG00000080007.8	ENST00000370336.5	2430	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.79843682124227	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGATAATTTGTCTTT	73394764	True	NA	NA	False	AATAAA	-24	NA	73394827	73417566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73395156_73397688_73397745_73400233_73400364_73401858_73401991_73404689_73404772_73405678_73405836_73406363_73406483_73407504_73407616_73407959_73408102_73409247_73409349_73412204_73412293_73413657_73413786_73413969_73414080_73414547_73414687_73415496_73415585_73416112_73416252_73417186
transcript_123181.known	chr6	-	156	1	FSM	ENSG00000235174.1	ENST00000424573.1	156	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	241	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTGCACATGAGATGGC	-73373251	False	NA	NA	False	NA	NA	NA	73373263	73373107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73373100_73373300
transcript_123182.known	chr6	+	3745	14	FSM	ENSG00000135297.17	ENST00000681932.1	3745	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	96.6635720105881	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460235	True	NA	NA	False	NA	NA	NA	73461748	73502427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73470251_73470277_73471485_73471558_73479731_73479845_73479935_73480127_73480317_73480368_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_123183.known	chr6	+	3721	13	FSM	ENSG00000135297.17	ENST00000679418.1	3721	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	92.5008633593342	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460223	True	NA	NA	False	NA	NA	NA	73461736	73502427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73471459_73471558_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_123184.known	chr6	+	3629	12	FSM	ENSG00000135297.17	ENST00000681509.1	3629	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	73.069196232178	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTGAGACTGTTTCAAAAAA	73460217	True	NA	NA	False	NA	NA	NA	73461730	73502427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_123186.known	chr6	+	10698	12	FSM	ENSG00000135297.17	ENST00000498286.6	10698	12	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	18.5374314195997	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAAGTCTATTTCGCTTTA	73460223	True	NA	NA	False	AATAAA	-20	NA	73461736	73509236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73497735_73497897_73500573
transcript_123188.known	chr6	+	2116	11	FSM	ENSG00000135297.17	ENST00000521156.6	2116	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	76.1955379270991	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCGTGTTTTGAGAGTT	73460223	True	NA	3	True	ATTAAA	-11	NA	73461736	73501092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73461795_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482039_73482245_73482448_73482621_73492233_73492353_73500573
transcript_123190.known	chr6	+	2685	11	FSM	ENSG00000135297.17	ENST00000681705.1	2685	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	80.5722656998052	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGATGGATACTTATTTG	73460217	True	NA	NA	False	TATAAA	-43	NA	73461730	73501367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_73462072_73466208_73466409_73466488_73466607_73473364_73473655_73479731_73479845_73479935_73480127_73480674_73480806_73482028_73482245_73482448_73482621_73492233_73492353_73500573
transcript_123216.known	chr6	-	1778	8	FSM	ENSG00000156508.19	ENST00000678508.1	1778	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	7798.01575493957	558998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520069	False	NA	-1	True	ATTAAA	-17	NA	73520214	73517514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520150
transcript_123218.known	chr6	-	3694	8	FSM	ENSG00000156508.19	ENST00000615060.5	3694	8	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_7	7701.15345190549	15072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAAGCTTTAAGATGA	-73520446	False	NA	-19	True	AATAAA	-3	NA	73520591	73515764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520361
transcript_123219.known	chr6	-	2048	8	FSM	ENSG00000156508.19	ENST00000331523.7	2048	8	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_7	7601.45137860031	559687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73521695	False	NA	-1	True	ATTAAA	-17	NA	73521840	73517514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73521506
transcript_123226.known	chr6	-	1731	8	FSM	ENSG00000156508.19	ENST00000678703.1	1731	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7983.23340712603	600678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAACCTGTGTGTTCCT	-73503429	True	NA	-8	True	ATTAAA	-10	NA	73521032	73517521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519508_73519882_73520057_73520999
transcript_123227.known	chr6	-	1842	7	FSM	ENSG00000156508.19	ENST00000678515.1	1842	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3343.83933110163	547966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73503429	True	NA	-1	True	ATTAAA	-17	NA	73521032	73517514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520999
transcript_123228.known	chr6	-	1823	8	FSM	ENSG00000156508.19	ENST00000677236.1	1823	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	7803.65917570804	547594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73523692	True	NA	-5	True	ATTAAA	-13	NA	73523837	73517518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73523724
transcript_123229.known	chr6	-	1790	8	FSM	ENSG00000156508.19	ENST00000676710.1	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	7801.33535926735	558984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTTCCTTTGGTCA	-73520840	False	NA	-1	True	ATTAAA	-17	NA	73520985	73517514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73519517_73519882_73520057_73520909
transcript_123230.known	chr6	-	2109	7	FSM	ENSG00000156508.19	ENST00000491404.2	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3818.71184287174	545769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503429	True	NA	-5	True	ATTAAA	-13	NA	73521032	73517518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519229_73519336_73520057_73520999
transcript_123231.known	chr6	-	1825	7	FSM	ENSG00000156508.19	ENST00000488500.2	1825	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3959.88425756781	545078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAACCTGTGTGTTCCTTTG	-73503428	True	NA	-5	True	ATTAAA	-13	NA	73521031	73517518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73519229_73519336_73519517_73519882_73520057_73520999
transcript_123232.known	chr6	-	1849	7	FSM	ENSG00000156508.19	ENST00000495333.6	1849	7	0	0	0	0	multi-exon	FALSE	canonical	3	13372	junction_6	3950.98728871096	544873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAACCTGTGTGTTCCTT	-73503429	True	NA	-7	True	ATTAAA	-11	NA	73521032	73517520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73517935_73518029_73518265_73518353_73518611_73518697_73518849_73518931_73519517_73519882_73520057_73520999
transcript_123236.known	chr6	-	3292	11	FSM	ENSG00000119899.13	ENST00000355773.6	3292	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	13.3626344707921	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGATCTGACAGTTCT	-73652905	True	NA	-12	True	AATAAA	-15	NA	73653992	73593378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_73595215_73600350_73600442_73610399_73610548_73615314_73615448_73621803_73621963_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_123238.nnic	chr6	-	1197	8	NNC	ENSG00000119899.13	novel	734	5	NA	NA	-22	12564	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42.3874259368391	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAATCTCTTTCCTTT	-73652927	True	NA	1	True	AATAAA	-33	NA	73654014	73622668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73622817_73629262_73629365_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_123244.nnic	chr6	-	1084	7	NNC	ENSG00000119899.13	novel	734	5	NA	NA	-22	12553	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	28.4004107951511	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACAGGACCTTCCAAT	-73652927	True	NA	-10	True	AATAAA	-22	NA	73654014	73622679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73622817_73635381_73635501_73636620_73636708_73638411_73638500_73641690_73641925_73644406_73644604_73653792
transcript_123251.nnic	chr6	-	592	3	NNC	ENSG00000119899.13	novel	3292	11	NA	NA	-22	-8859	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	46.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTTTATAGGAGTATTA	-73652927	True	NA	NA	False	ATTAAA	-20	NA	73654014	73644091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_73644265_73644406_73644604_73653792
transcript_123280.known	chr6	-	357	3	FSM	ENSG00000112695.13	ENST00000460985.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3448.5	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTGTCTGATTTTATCA	-75205774	True	NA	-17	True	AATAAA	-14	NA	75243788	75237788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240300_75240386_75243716
transcript_123281.known	chr6	-	325	3	FSM	ENSG00000112695.13	ENST00000472311.6	325	3	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	2978	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAACTGCCACCAATAA	-75205771	True	NA	-51	True	GATAAA	-40	NA	75243785	75237822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75241175_75241266_75243716
transcript_123282.known	chr6	-	486	4	FSM	ENSG00000112695.13	ENST00000509698.6	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3274.23276848519	43280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205787	True	NA	-15	True	AATAAA	-16	NA	75243801	75237786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240276_75240386_75241175_75241266_75243716
transcript_123283.known	chr6	-	773	4	FSM	ENSG00000112695.13	ENST00000370089.6	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	6251	junction_3	508.389832925701	34948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGCAACATTATTGTGA	NA	False	NA	-13	True	ACTAAA	-5	NA	75244009	75237683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240300_75240386_75241175_75241266_75243716
transcript_123284.known	chr6	-	501	4	FSM	ENSG00000112695.13	ENST00000459637.2	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	3012.52728894971	1285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTGATTTTATCACT	-75205773	True	NA	-15	True	AATAAA	-16	NA	75243787	75237786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75237989_75240300_75240386_75241122_75241266_75243716
transcript_123285.known	chr6	-	4418	7	FSM	ENSG00000112697.17	ENST00000230461.11	4418	7	0	0	0	0	multi-exon	TRUE	canonical	3	712	junction_6	64.6411031946564	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGACCGTGGTGGCCTTAT	-75272647	True	NA	NA	False	AATAAA	-20	NA	75284792	75252923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75267640_75267749_75284401
transcript_123288.known	chr6	-	2791	6	FSM	ENSG00000112697.17	ENST00000475111.6	2791	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	323.797714630601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAAACAATGTAATGGTT	NA	False	NA	NA	False	AATATA	-17	NA	75284948	75254598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75256296_75258779_75258987_75259346_75259491_75260823_75260912_75265230_75265339_75284401
transcript_123289.known	chr6	-	3764	3	FSM	ENSG00000118407.15	ENST00000498523.1	3764	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	6	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGAACAGAGTTTTACTT	-75334655	True	NA	-2	True	AATAAA	-22	NA	75334790	75308087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_75308898_75312396_75315203_75334642
transcript_123294.known	chr6	+	1567	3	FSM	ENSG00000225793.4	ENST00000607221.3	1580	3	13	0	-13	0	multi-exon	FALSE	canonical	2	2	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGGTGCAAAAATA	75284944	True	NA	NA	False	AATAAA	-39	NA	75285032	75292153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75285310_75290253_75290339_75290948
transcript_123297.known	chr6	+	6671	24	FSM	ENSG00000112701.18	ENST00000447266.7	6671	24	0	0	0	0	multi-exon	FALSE	canonical	2	173	junction_5	81.167543589326	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACCAAGAGTTTGGTGG	75598343	True	NA	NA	False	AATAAA	-21	NA	75601879	75718281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75640683_75640705_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_123298.known	chr6	+	4644	23	FSM	ENSG00000112701.18	ENST00000370010.6	4644	23	0	0	0	0	multi-exon	TRUE	canonical	2	63	junction_5	98.293339441248	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATGATTAATTTGATAT	NA	False	NA	16	True	AATAAA	-19	NA	75601508	75715904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75602577_75621531_75621626_75623899_75623961_75633580_75633727_75634706_75634812_75647730_75647802_75659261_75659408_75663220_75663519_75666711_75666942_75670552_75670721_75675434_75675469_75675859_75676055_75677029_75677257_75678582_75678693_75678810_75678928_75695803_75695924_75697424_75697518_75702644_75703073_75709526_75709631_75711327_75711417_75713512_75713582_75713674_75713826_75715384
transcript_123305.known	chr6	+	5598	32	FSM	ENSG00000196586.17	ENST00000369975.6	5598	32	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_13	21.4709832506147	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCGCCTTTAACTGGT	75744511	True	NA	NA	False	AGTAAA	-21	NA	75749234	75916612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892691_75907604_75907709_75908495_75908628_75914062_75914282_75914812
transcript_123306.known	chr6	+	3122	28	FSM	ENSG00000196586.17	ENST00000627432.3	3122	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.8104684460171	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGGAAGCAAAGAGAAAACAA	75744512	True	NA	5	True	NA	NA	NA	75749235	75891238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75846967_75846977_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227
transcript_123308.known	chr6	+	8692	36	NNC	ENSG00000196586.17	novel	8642	36	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_28	65.1821560658111	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCATCTTGTGCTTTT	75744468	True	NA	10	True	AATAAA	-25	NA	75749191	75919537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213_75841379_75844896_75844978_75848350_75848532_75855138_75855284_75857096_75857255_75858901_75858994_75861022_75861096_75862595_75862724_75866525_75866622_75866931_75867106_75870646_75870686_75873206_75873301_75879819_75879951_75880042_75880121_75881688_75881819_75886003_75886095_75886843_75886995_75890056_75890266_75891227_75891307_75892529_75892694_75894813_75894841_75895230_75895261_75898372_75898412_75907604_75907709_75908495_75908628_75911671_75911699_75914062_75914282_75914812
transcript_123313.nic	chr6	+	983	9	ISM	ENSG00000196586.17	ENST00000663400.1	3140	27	7	48888	3	-45625	5prime_fragment	FALSE	canonical	3	159	junction_7	13.833270582187	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAAGAAATTATCATAT	75744484	True	NA	NA	False	NA	NA	NA	75749207	75841282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_75749424_75817500_75817665_75822781_75822852_75828539_75828614_75830415_75830546_75832841_75832948_75835900_75835957_75840584_75840683_75841213
transcript_123314.known	chr6	+	627	2	FSM	ENSG00000280511.1	ENST00000626131.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_1	0	1952	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGACTCTCTTTTCGG	76557139	True	NA	-50	True	TATAAA	-21	NA	76561327	76562590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_76561668_76562303
transcript_12332.nic	chr1	+	1206	9	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_3	111.626329779313	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166337	False	NA	19	True	AATAAA	-16	NA	161166365	161171218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_123321.nic	chr6	-	2994	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-45	48473	-45	-42346	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGGTTTGGTTTTTAAC	-79071870	True	NA	NA	False	AAAAAG	-45	NA	79078299	78982891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_123323.nic	chr6	-	2935	23	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-45	48532	-45	-42405	5prime_fragment	FALSE	canonical	3	169	junction_14	30.9390563303338	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGAAGAAAAAGATGGA	-79071870	True	NA	NA	False	ATTAAA	-17	NA	79078299	78982950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_123327.known	chr6	-	11926	40	FSM	ENSG00000146247.14	ENST00000275034.5	11926	40	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_31	44.7387478094275	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGCTTTGCATTA	-79071825	True	NA	NA	False	AATAAA	-22	NA	79078254	78934418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_78941331_78945299_78945498_78946000_78946261_78946710_78946875_78947622_78947776_78954813_78954964_78955231_78955283_78955612_78955683_78958474_78958601_78961689_78961811_78963096_78963253_78965702_78965765_78965944_78966057_78969834_78969918_78970048_78970174_78970780_78970889_78978591_78978712_78982885_78983118_78985351_78985429_78988208_78988350_78990867_78990986_78997413_78997598_78998253_78998392_79001898_79002125_79003729_79003859_79015081_79015217_79015629_79015784_79016543_79016643_79017345_79017387_79017482_79017584_79019088_79019160_79025518_79025620_79025942_79026165_79042842_79043004_79060477_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_123330.nic	chr6	-	733	6	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	21	125930	21	-119803	5prime_fragment	FALSE	canonical	3	170	junction_1	21.2884945451763	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGATTTTTTTTCTTAGTA	-79071804	True	NA	NA	False	AAAAAG	-7	NA	79078233	79060348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_79060577_79060667_79060819_79077447_79077508_79077699_79077730_79077854_79077914_79078028
transcript_123332.nic	chr6	-	677	4	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-45	142772	-45	-136645	5prime_fragment	FALSE	canonical	3	213	junction_3	3.55902608401044	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTGCAGTGCAAGGCCG	-79071870	True	NA	-21	True	AATAAA	-14	NA	79078299	79077190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_79077508_79077699_79077730_79077854_79077914_79078028
transcript_123333.nic	chr6	-	488	4	ISM	ENSG00000146247.14	ENST00000275034.5	11926	40	-45	142961	-45	-136834	5prime_fragment	FALSE	canonical	3	213	junction_3	3.55902608401044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTTACAGAGACAAAAAC	-79071870	True	NA	NA	False	AATAAA	-18	NA	79078299	79077379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_79077508_79077699_79077730_79077854_79077914_79078028
transcript_123341.known	chr6	+	5577	4	FSM	ENSG00000146243.14	ENST00000369940.7	5577	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	11.8977121983832	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	78866561	True	NA	5	True	AATGAA	-18	NA	78867550	78903102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_78867892_78885377_78885444_78897828_78897960_78898063
transcript_123345.nnic	chr6	+	1025	4	NIC	ENSG00000146243.14	novel	5577	4	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	30.4448499567478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGAATGTAAGTTGGTT	78866557	True	NA	4	True	AATGAA	-17	NA	78867546	78903101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_78867892_78885377_78885444_78897828_78897960_78902618
transcript_123346.nic	chr6	+	709	4	ISM	ENSG00000146243.14	ENST00000606868.5	1634	5	-116	43338	-60	0	5prime_fragment	FALSE	canonical	1	1	junction_3	30.4448499567478	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGTAAGTTGGTTC	NA	False	NA	5	True	AATGAA	-18	NA	78867490	78903102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_78867892_78885377_78885444_78897828_78897960_78902991
transcript_123349.nnic	chr6	+	952	4	NNC	ENSG00000146243.14	novel	5577	4	NA	NA	250	-4515	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	19.4307888557196	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGACAGTTCATACAA	78867845	False	NA	12	True	AATAAA	-20	NA	78867856	78898586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_78868089_78885377_78885444_78897828_78897960_78898063
transcript_123360.known	chr6	+	2229	2	FSM	ENSG00000286340.2	ENST00000669651.1	2229	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGAAATTCATCACTTT	79078510	True	NA	NA	False	TATAAA	-5	NA	79078576	79081371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79078871_79079436
transcript_123395.known	chr6	+	2946	2	FSM	ENSG00000270362.2	ENST00000604516.2	2965	2	19	0	19	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAAGCTTGCTTGTTGGAT	79233661	False	NA	NA	False	AATAAA	-16	NA	79233717	79236797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79233928_79234061
transcript_123397.known	chr6	-	872	6	FSM	ENSG00000118418.14	ENST00000344726.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	1912	junction_1	1194.79052557342	12831	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79201727_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_123398.known	chr6	-	831	6	FSM	ENSG00000118418.14	ENST00000275036.11	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	2963	junction_1	779.148098887497	21353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGACTCTTAGTATCTT	-79191886	True	NA	-6	True	AATAAA	-21	NA	79234689	79201244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79201727_79202316_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_123399.known	chr6	-	1010	7	FSM	ENSG00000118418.14	ENST00000620514.1	1010	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2284.81884159092	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATACCTGACTCTTAGTA	-79191935	True	NA	-10	True	AATAAA	-17	NA	79234738	79201248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79201727_79202062_79202156_79202275_79202390_79203579_79203631_79208546_79208577_79214971_79215023_79234545
transcript_123401.known	chr6	-	4564	8	FSM	ENSG00000135338.14	ENST00000369846.9	4564	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	4.16986271980755	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACTCTTTATTTAAGT	-79536482	True	NA	NA	False	AATAAA	-14	NA	79537430	79484990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79487867_79489083_79489217_79491587_79491731_79492550_79492648_79493612_79493751_79513211_79513742_79518704_79519086_79537164
transcript_123402.nnic	chr6	+	997	3	NNC	ENSG00000287811.2	novel	1422	2	NA	NA	71	1964	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATTTTTTGACTGC	79537234	False	NA	NA	False	AATACA	-17	NA	79537255	79541940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_79537713_79538727_79538844_79541516
transcript_123403.nnic	chr6	+	846	3	NNC	ENSG00000287811.2	novel	1480	2	NA	NA	0	1964	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	3	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTATTTTTTGACTGC	79536623	True	NA	NA	False	AATACA	-17	NA	79537578	79541940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_79537885_79538727_79538844_79541516
transcript_123408.known	chr6	+	1422	2	FSM	ENSG00000287811.2	ENST00000671258.1	1422	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCTAACTTCTTGA	79537518	False	NA	NA	False	NA	NA	NA	79537539	79539976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79537713_79538727
transcript_123409.known	chr6	+	4603	4	FSM	ENSG00000198478.8	ENST00000369838.6	4603	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	11.4697670227235	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTCTTCTGTCACCTCC	79628711	True	NA	13	True	AATAAA	-16	NA	79631328	79703655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_79631507_79673613_79673800_79696484_79696566_79699497
transcript_123414.known	chr6	-	3013	6	FSM	ENSG00000118402.6	ENST00000369816.5	3013	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	13.1209755734854	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTTTTTTTGTTAAT	-79946259	True	NA	-4	True	AATAAA	-23	NA	79947553	79914813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_79916884_79919419_79919548_79921624_79921797_79924951_79925033_79926193_79926382_79947179
transcript_123418.known	chr6	+	2966	22	FSM	ENSG00000112742.10	ENST00000369798.7	2966	22	0	0	0	0	multi-exon	TRUE	canonical	3	319	junction_3	34.3235901900925	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTTGTAAGGTTGTTTT	79998907	True	NA	25	True	AATAAA	-30	NA	80004648	80042527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80004714_80005841_80005983_80007808_80008032_80008385_80008493_80010813_80010958_80011433_80011549_80011728_80011802_80011885_80011981_80013278_80013367_80014462_80014587_80022323_80022473_80026377_80026515_80027884_80028012_80031466_80031560_80034984_80035143_80035265_80035418_80036474_80036600_80037966_80038048_80039695_80039873_80040195_80040281_80040605_80040704_80042118
transcript_123434.known	chr6	+	1514	11	FSM	ENSG00000083123.15	ENST00000356489.9	1514	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_10	48.027179804773	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAATCAAATTGTCTTTG	80100700	True	NA	-13	True	AATAAA	-1	NA	80106646	80346254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663_80343813_80345974
transcript_123451.known	chr6	+	3668	10	FSM	ENSG00000083123.15	ENST00000320393.9	3668	10	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	24.9923445068809	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTATGTGTTCTT	80100724	True	NA	3	True	AATAAA	-17	NA	80106670	80346270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_80106890_80127546_80127625_80129160_80129230_80167677_80167812_80168874_80169031_80171281_80171391_80200933_80201032_80203101_80203213_80273134_80273222_80343663
transcript_123462.nic	chr6	-	1322	2	ISM	ENSG00000112773.16	ENST00000320172.11	5582	3	612	3900	-257	240	3prime_fragment	FALSE	canonical	3	30	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAAGAGTGATC	-81751837	False	NA	NA	False	NA	NA	NA	81752069	81749629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_81750472_81751589
transcript_123463.known	chr6	-	520	2	FSM	ENSG00000224995.1	ENST00000441949.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTATTTCTCACCTTTG	NA	False	NA	NA	False	AATAAA	-45	NA	81814157	81813285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_81813677_81814028
transcript_123465.known	chr6	-	6040	29	FSM	ENSG00000005700.15	ENST00000306270.12	6040	29	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_25	16.8436689492957	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTCATTTGAAGCTTT	-82246171	True	NA	-8	True	AGTAAA	-18	NA	82247744	82169986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_82171557_82172379_82172513_82173366_82173439_82181878_82182029_82191072_82191217_82191786_82191880_82194478_82194643_82196297_82196447_82200140_82200254_82200586_82200709_82201421_82201483_82202527_82202646_82204856_82204959_82210813_82210911_82211366_82211405_82211489_82211573_82212706_82212794_82214226_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_123467.nic	chr6	-	2710	12	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-31	22971	-31	-22971	5prime_fragment	FALSE	canonical	3	61	junction_8	10.3787768192819	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAGGGAAGATGATCCTG	-82246212	True	NA	NA	False	AAAAAG	-8	NA	82247785	82214301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_82214830_82216075_82216251_82217959_82218138_82220589_82220714_82223439_82223621_82224067_82224186_82225476_82225648_82227191_82227303_82231717_82231843_82234158_82234256_82240165_82240844_82247561
transcript_123468.nic	chr6	-	1077	2	ISM	ENSG00000005700.15	ENST00000369751.2	4437	24	-31	48660	-31	-48660	5prime_fragment	FALSE	canonical	3	90	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTTGTGATGTAAAATT	-82246212	True	NA	NA	False	ATTAAA	-24	NA	82247785	82239990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_82240844_82247561
transcript_123474.nnic	chr6	+	1669	3	NNC	ENSG00000146242.9	novel	2881	2	NA	NA	4	-488	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	43.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGTGTGTGCAAGTTTG	82363445	True	NA	NA	False	AATAAA	-15	NA	82364247	82366929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_82364330_82364622_82364736_82365455
transcript_123480.known	chr6	-	1925	10	FSM	ENSG00000118420.17	ENST00000369747.8	1925	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	11.4255507471869	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGTTGTTCTATTCTTTG	-83062913	True	NA	0	True	AATAAA	-24	NA	83065841	82892389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_82893043_82957311_82957451_83018972_83019137_83022452_83022562_83023968_83024039_83038415_83038486_83044427_83044660_83054147_83054239_83057825_83058023_83065641
transcript_123485.known	chr6	-	1866	12	FSM	ENSG00000013375.16	ENST00000651425.1	1866	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	138.807911747264	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATCTTTGCCATCACC	-83185167	True	NA	-3	True	ATTAAA	-19	NA	83193288	83168902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83193178
transcript_12349.nic	chr1	+	1087	8	NIC	ENSG00000143224.18	novel	1733	13	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_4	154.38581408872	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166337	False	NA	19	True	AATAAA	-16	NA	161166365	161171218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_161166673_161166839_161166935_161167099_161167235_161169659_161169721_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_123492.nnic	chr6	+	1471	4	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-23	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	28.2488937836511	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	83191914	True	NA	7	True	AATAAA	-15	NA	83193333	83196537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_83193444_83194311_83194653_83195194_83195272_83195594
transcript_123493.nnic	chr6	+	1252	4	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-23	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	6.48074069840786	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	83191914	True	NA	7	True	AATAAA	-15	NA	83193333	83196537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_83193444_83194530_83194653_83195194_83195272_83195594
transcript_123495.known	chr6	+	3769	3	FSM	ENSG00000013392.8	ENST00000369724.5	3769	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	5.5	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTTGCTTTTCATTCC	83191937	True	NA	19	True	AGTAAA	-20	NA	83193356	83198935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83193444_83194311_83194653_83195594
transcript_123497.nnic	chr6	+	1175	3	NNC	ENSG00000013392.8	novel	3769	3	NA	NA	-23	-2398	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	37	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGAAGCTGATTTGATT	83191914	True	NA	7	True	AATAAA	-15	NA	83193333	83196537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_83193444_83194530_83194653_83195594
transcript_123499.known	chr6	-	143	1	FSM	ENSG00000013375.16	ENST00000605602.1	143	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCATGTCTACCTGCCTG	-83188566	False	8121	NA	False	AGTAAA	-16	NA	83188645	83188502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83188500_83188600
transcript_123500.known	chr6	-	6079	13	FSM	ENSG00000013375.16	ENST00000513973.6	6079	13	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	40.239560412885	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTCCTTTGACTTCA	-83185144	True	NA	0	True	AATAAA	-21	NA	83193265	83164872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_123501.known	chr6	-	2996	12	FSM	ENSG00000013375.16	ENST00000650640.1	2996	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	142.413900333726	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAACTTTGGCAATTG	-83185140	True	NA	NA	False	ATTAAA	-3	NA	83193261	83167793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_123502.known	chr6	-	1893	12	FSM	ENSG00000013375.16	ENST00000650642.1	1893	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	136.160636779741	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAATCTTATTACCAAC	-83185136	True	NA	-28	True	NA	NA	NA	83193257	83168927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169324_83170304_83170479_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_123503.known	chr6	-	1952	13	FSM	ENSG00000013375.16	ENST00000509219.2	1952	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	128.85036541146	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTCTGTTTTCCGTTTA	-83185147	True	NA	-1	True	ATTAAA	-22	NA	83193268	83169520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83169842_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_123504.known	chr6	-	2013	14	FSM	ENSG00000013375.16	ENST00000512866.5	2013	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	122.528586206933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCATTTTCTCTATTCTA	-83185110	True	NA	-5	True	AATAAA	-19	NA	83193231	83166129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83166467_83169241_83169324_83170304_83170479_83171936_83172060_83174373_83174488_83175961_83176061_83178672_83178757_83179809_83179968_83181735_83181932_83182844_83182979_83187007_83187076_83188613_83188799_83190808_83191015_83193178
transcript_123505.known	chr6	-	561	5	FSM	ENSG00000013375.16	ENST00000505470.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	208.103790210558	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTACATGGTGTATTGTCG	-83185134	True	NA	NA	False	NA	NA	NA	83193255	83182949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83182979_83187007_83187076_83188613_83188795_83190808_83191015_83193178
transcript_123506.known	chr6	-	3338	14	FSM	ENSG00000065833.9	ENST00000369705.4	3338	14	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	9.09385643454255	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTTCTTAAAATGTTACA	-83430353	True	NA	-9	True	AATAAA	-18	NA	83431051	83210401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83212095_83216497_83216597_83223759_83223934_83227334_83227478_83228825_83228932_83237716_83237831_83239538_83239637_83253628_83253739_83315309_83315414_83346172_83346335_83352063_83352140_83398366_83398517_83407767_83407902_83430876
transcript_123508.known	chr6	+	2444	2	FSM	ENSG00000146250.7	ENST00000369700.4	2444	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGTCTGGTTATTTTCC	83512081	True	NA	10	True	AATAAA	-22	NA	83512533	83525704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83512695_83523421
transcript_123510.known	chr6	+	664	4	FSM	ENSG00000203877.9	ENST00000369689.6	570	4	-94	0	-94	0	multi-exon	FALSE	canonical	3	8	junction_1	7.78888096369861	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	83853227	True	NA	NA	False	AATAAA	-17	NA	83853265	83857515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83853512_83853694_83853774_83854096_83854162_83857241
transcript_123512.known	chr6	+	521	3	FSM	ENSG00000203877.9	ENST00000369687.2	521	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTGGTATTTGGCCTT	83853502	True	NA	NA	False	AATAAA	-17	NA	83853591	83857515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83853774_83854096_83854162_83857241
transcript_123513.known	chr6	-	1856	1	FSM	ENSG00000287705.1	ENST00000656981.1	1856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTGATTGTAAACTATAGT	-83854144	True	NA	NA	False	AATAAA	-33	NA	83854167	83852311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_83852300_83854200
transcript_123516.known	chr6	+	9205	16	FSM	ENSG00000065615.14	ENST00000369681.10	9205	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_14	14.35208076281	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCAGTCTCTCTGTATTTT	83857218	True	NA	3	True	AATAAA	-15	NA	83859688	83967423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514_83940602_83955297_83955463_83959823
transcript_123524.nic	chr6	+	1615	14	ISM	ENSG00000065615.14	ENST00000369681.10	9205	16	-43	26690	-10	-14642	5prime_fragment	FALSE	canonical	3	97	junction_9	11.8800713244726	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACTAGAAATCATGTTAAA	83857175	True	NA	NA	False	AATAAA	-13	NA	83859645	83940733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83914415_83914449_83918004_83918066_83919396_83919455_83921081_83921176_83922437_83922471_83924469_83924593_83934594_83934736_83936223_83936377_83940055_83940207_83940514
transcript_123532.known	chr6	+	768	5	FSM	ENSG00000065615.14	ENST00000369679.4	768	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	57.9282961945197	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAGACAAAGCACAAGCTCA	83857185	True	NA	NA	False	NA	NA	NA	83859655	83910296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_83859858_83864174_83864329_83893521_83893623_83909008_83909091_83910067
transcript_123537.known	chr6	+	2137	4	FSM	ENSG00000135324.6	ENST00000257776.5	2137	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.94392028877595	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAAATTTCCTCTGGTTCT	84033246	True	NA	4	True	AATAAA	-15	NA	84033771	84090881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_84033884_84055311_84055446_84062892_84062993_84089090
transcript_123538.known	chr6	-	5155	27	FSM	ENSG00000135315.12	ENST00000403245.8	5155	27	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_22	9.68719340037822	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTTTATATAATGATTT	-84226717	True	NA	-10	True	AATAAA	-17	NA	84227643	84124249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_84125277_84126377_84126513_84146686_84146786_84149561_84149704_84152544_84153180_84155297_84155511_84160811_84160917_84161745_84161910_84163143_84163271_84169327_84169434_84171605_84171719_84174047_84174189_84174726_84174955_84175213_84175348_84185186_84185449_84186331_84186624_84193608_84193691_84194883_84195076_84200788_84200906_84201736_84201768_84203980_84204097_84212956_84213025_84215281_84215466_84215775_84215923_84221056_84221172_84226336_84226453_84227579
transcript_123547.known	chr6	-	3412	29	FSM	ENSG00000135317.14	ENST00000684581.1	3412	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	65.7476138311482	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85592176	True	NA	NA	False	TATAAA	-1	NA	85593857	85505527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517872_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_123548.known	chr6	-	3193	29	FSM	ENSG00000135317.14	ENST00000505648.5	3193	29	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_28	50.6366986986913	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTCTCATAGTCTTTCA	-85594122	True	NA	-11	True	AATAAA	-31	NA	85594156	85505797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_123552.known	chr6	-	4167	28	FSM	ENSG00000135317.14	ENST00000683542.1	4167	28	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_24	58.3440201850886	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATAGGTAAACTGGAAA	-85593882	False	NA	NA	False	TTTAAA	-32	NA	85593897	85504775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_123553.known	chr6	-	3375	28	FSM	ENSG00000135317.14	ENST00000681981.1	3375	28	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	58.654202753817	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85593882	False	NA	NA	False	TATAAA	-1	NA	85593897	85505527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_123554.known	chr6	-	3872	28	FSM	ENSG00000135317.14	ENST00000683880.1	3872	28	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_24	65.3939208443867	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTATAGGTAAACTGGAAA	-85592176	True	NA	NA	False	TTTAAA	-32	NA	85593857	85504775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_123555.known	chr6	-	3653	28	FSM	ENSG00000135317.14	ENST00000682412.1	3653	28	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_21	66.872460145608	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593703	False	NA	NA	False	NA	NA	NA	85593718	85504994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572372_85574257_85574379_85593578
transcript_123556.known	chr6	-	3111	28	FSM	ENSG00000135317.14	ENST00000369627.6	3111	28	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	45.9132300253209	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATTGAGTCTCATAGTCT	-85592169	True	NA	-15	True	AATAAA	-27	NA	85593850	85505801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_123558.known	chr6	-	3856	27	FSM	ENSG00000135317.14	ENST00000683458.1	3856	27	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_17	67.1845576966866	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85593882	False	NA	NA	False	NA	NA	NA	85593897	85504994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547115_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_123559.known	chr6	-	3267	27	FSM	ENSG00000135317.14	ENST00000682738.1	3267	27	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	58.7025900863006	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCATCCTATATGAGTT	-85593882	False	NA	NA	False	TATAAA	-1	NA	85593897	85505527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85565331_85565420_85567533_85567578_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_123560.known	chr6	-	3348	26	FSM	ENSG00000135317.14	ENST00000346348.7	3348	26	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_22	58.1766138581475	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGGATTTGTCCTTATTC	-85593898	False	NA	NA	False	AATAAA	-29	NA	85593913	85505495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85557975_85558061_85572136_85572216_85572297_85572375_85574257_85574379_85593578
transcript_123562.known	chr6	-	3500	26	FSM	ENSG00000135317.14	ENST00000683195.1	3500	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	68.380862819944	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGATTGTTAGGTGTTA	-85592196	True	NA	NA	False	NA	NA	NA	85593877	85504994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85506006_85507232_85507290_85507967_85508060_85513799_85513896_85514069_85514235_85514505_85514630_85517755_85517876_85518007_85518049_85526125_85526238_85528261_85528363_85530191_85530276_85533598_85533801_85536791_85536925_85538837_85538865_85541984_85542044_85543181_85543307_85543604_85543761_85547111_85547227_85547316_85547398_85547505_85547551_85548300_85548377_85549722_85549880_85572136_85572216_85572297_85572375_85574257_85574379_85593833
transcript_123564.known	chr6	-	2380	2	FSM	ENSG00000135317.14	ENST00000684183.1	2380	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TATCTCAAAAAAAAAAAAAA	-85592196	True	NA	NA	False	NA	NA	NA	85593877	85589252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85591334_85593578
transcript_123566.known	chr6	-	6591	13	FSM	ENSG00000135316.19	ENST00000676637.1	6591	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_12	303.906052734869	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCTTAATTTTTGATGGA	-85643763	False	NA	NA	False	AATAAA	-11	NA	85643778	85608114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796_85642891_85643749
transcript_123568.known	chr6	-	6427	12	FSM	ENSG00000135316.19	ENST00000678878.1	6427	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	283.999185192639	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85642963	False	NA	-27	True	AATAAA	-17	NA	85642978	85608334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_123570.known	chr6	-	2158	12	FSM	ENSG00000135316.19	ENST00000676542.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	316.77734183101	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGTAGATTTTTCCCCT	-85642963	False	NA	-16	True	AATAAA	-26	NA	85642978	85612568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85615018_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_123574.known	chr6	-	1804	12	FSM	ENSG00000135316.19	ENST00000444272.2	1804	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	324.883857187699	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGGAAATCAAGCAACCT	-85642027	False	NA	NA	False	NA	NA	NA	85642042	85612831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85641989
transcript_123576.known	chr6	-	6336	12	FSM	ENSG00000135316.19	ENST00000677771.1	6336	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_11	365.932252231394	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCTTAGGATCTCCAGGA	-85641637	True	NA	-27	True	AATAAA	-17	NA	85643840	85608334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612921_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_123579.known	chr6	-	6770	11	FSM	ENSG00000135316.19	ENST00000616122.5	6770	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_10	290.868630140825	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGTGTTACAGCTTCCT	-85642907	False	35266	-1	True	AATAAA	-21	NA	85642922	85607778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_123583.known	chr6	-	3314	11	FSM	ENSG00000135316.19	ENST00000676630.1	3314	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_7	335.471742476173	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTGGAGGCGAGTGTAAC	-85642948	False	35266	-12	True	AATAAA	-16	NA	85642963	85611321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85612924_85614980_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_123586.known	chr6	-	2754	11	FSM	ENSG00000135316.19	ENST00000369622.8	2754	11	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_10	138.500685918879	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTGGTAAGTATTT	-85642871	False	NA	NA	False	AATAAA	-20	NA	85642886	85613975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_123587.known	chr6	-	2552	11	FSM	ENSG00000135316.19	ENST00000676688.1	2552	11	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	294.129580287328	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85641664	True	NA	40	True	AATAAA	-28	NA	85643867	85614205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85643749
transcript_123591.known	chr6	-	3310	10	FSM	ENSG00000135316.19	ENST00000678899.1	3310	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_9	286.441686048265	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGACTTGAAAGACAAAC	-85642996	False	NA	NA	False	AATAAA	-17	NA	85643011	85613384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_123592.known	chr6	-	2421	10	FSM	ENSG00000135316.19	ENST00000677514.1	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	410.507003594336	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85642954	False	35266	40	True	AATAAA	-28	NA	85642969	85614205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637268_85637357_85640220_85640329_85640445_85640565_85642796
transcript_123595.known	chr6	-	1823	10	FSM	ENSG00000135316.19	ENST00000678589.1	1823	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	418.894076006787	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGATAGGTTGATCAGAAA	-85642957	False	35266	NA	False	NA	NA	NA	85642972	85614727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85618817_85618940_85619267_85619418_85622586_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_123603.known	chr6	-	2317	9	FSM	ENSG00000135316.19	ENST00000678816.1	2317	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	352.419760371067	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTGTGTTTACAATTCG	-85642936	False	35266	40	True	AATAAA	-28	NA	85642951	85614205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85615348_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85641291_85641452_85642796
transcript_123604.nic	chr6	-	1634	9	ISM	ENSG00000135316.19	ENST00000678899.1	3310	10	-314	5460	-314	-4117	5prime_fragment	FALSE	canonical	3	190	junction_8	295.050392941613	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGAGGCAAGCAGCAAAAA	-85608059	True	NA	23	True	AAGAAA	-8	NA	85643325	85618844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_85618940_85619267_85619418_85622481_85622688_85623976_85624113_85636966_85637144_85637242_85637357_85640220_85640329_85640445_85640565_85642796
transcript_123614.known	chr6	-	738	6	FSM	ENSG00000203875.13	ENST00000669824.1	738	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	2713.18636293197	15176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678402
transcript_123616.known	chr6	-	638	6	FSM	ENSG00000203875.13	ENST00000667622.1	638	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2721.83122180638	4815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTATGTTCCTTTTTG	-85678738	False	NA	-17	True	AATAAA	-11	NA	85678748	85677086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678497
transcript_123623.known	chr6	-	401	4	FSM	ENSG00000203875.13	ENST00000453754.5	401	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	2808.40551836012	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGTTCCTTTTTGTTA	-85678563	False	NA	-14	True	AATAAA	-14	NA	85678573	85677083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678402
transcript_123624.known	chr6	-	790	3	FSM	ENSG00000203875.13	ENST00000435947.6	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677186_85677419_85677493_85678135
transcript_123626.known	chr6	-	818	9	FSM	ENSG00000203875.13	ENST00000650155.1	818	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3120.18765210924	14982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAACACGCAAGGAACT	-85678738	False	NA	NA	False	AGTAAA	-11	NA	85678748	85660949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85661135_85663673_85663727_85666003_85666148_85677092_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
transcript_123627.known	chr6	-	451	6	FSM	ENSG00000203875.13	ENST00000414002.6	451	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	2648.09614629076	19457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85677876_85677953_85678033_85678135_85678189_85678693
transcript_123628.known	chr6	-	866	4	FSM	ENSG00000203875.13	ENST00000428833.6	866	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3484.71063679931	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-85678738	False	NA	-15	True	AATAAA	-13	NA	85678748	85677084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677186_85677419_85677493_85677953_85678033_85678135
transcript_123629.known	chr6	-	703	6	FSM	ENSG00000203875.13	ENST00000669160.1	703	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2745.65351055081	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGTCAGTCTTGTCCAT	-85586093	True	NA	-8	True	ATTAAA	-16	NA	85678736	85665769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
transcript_123630.known	chr6	-	772	7	FSM	ENSG00000203875.13	ENST00000671650.1	772	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2534.76385597467	14990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACAGGGTCAACTGTACA	-85678738	False	NA	-50	True	NA	NA	NA	85678748	85665811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85677092_85677192_85677423_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678693
transcript_123631.known	chr6	-	1000	2	FSM	ENSG00000203875.13	ENST00000587692.6	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGTCCATTGTATTATT	-85678738	False	NA	1	True	ATTAAA	-25	NA	85678748	85665760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85666148_85678135
transcript_123632.known	chr6	-	600	5	FSM	ENSG00000203875.13	ENST00000664198.1	600	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1320.31634466896	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	-85678738	False	NA	-16	True	ATTAAA	-16	NA	85678748	85677006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85678033_85678135_85678189_85678693
transcript_123633.known	chr6	-	279	4	FSM	ENSG00000203875.13	ENST00000660949.1	279	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	2778.10754931402	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTATGTTCCTTTTTGT	-85678738	False	NA	-16	True	AATAAA	-12	NA	85678748	85677085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85678135_85678189_85678697
transcript_123634.known	chr6	-	934	5	FSM	ENSG00000203875.13	ENST00000369605.9	934	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3021.86287743173	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85586089	True	NA	-12	True	AATAAA	-16	NA	85678732	85677081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677186_85677419_85677493_85677794_85677876_85677953_85678033_85678135
transcript_123635.known	chr6	-	977	3	FSM	ENSG00000203875.13	ENST00000662245.1	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_2	2813.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677953
transcript_123636.known	chr6	-	823	4	FSM	ENSG00000203875.13	ENST00000427501.6	823	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	3189.41649139079	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85678738	False	NA	-12	True	AATAAA	-16	NA	85678748	85677081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85678033_85678135_85678189_85678697
transcript_123637.known	chr6	-	553	5	FSM	ENSG00000203875.13	ENST00000667545.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1073.88369365588	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677876_85677953_85678189_85678693
transcript_123638.known	chr6	-	456	6	FSM	ENSG00000203875.13	ENST00000623001.4	456	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2691.50778561014	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTATGTTCCTTTTTGTT	-85586093	True	NA	-15	True	AATAAA	-13	NA	85678736	85677084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85677900_85677953_85678033_85678135_85678189_85678693
transcript_123639.known	chr6	-	257	3	FSM	ENSG00000203875.13	ENST00000625175.3	257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3783.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTATGTTCCTTTTTGTTA	-85678195	False	NA	-14	True	AATAAA	-14	NA	85678205	85677083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677953_85678033_85678135
transcript_12364.known	chr1	-	1933	8	FSM	ENSG00000158850.15	ENST00000319769.10	1933	8	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_6	61.881057732738	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTGCTTTCTGCAT	-161174411	True	NA	-18	True	AATAAA	-16	NA	161177507	161171309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176075_161176433_161176580_161177422
transcript_123640.known	chr6	-	750	5	FSM	ENSG00000203875.13	ENST00000668512.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_4	1303.79587646993	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTCCTTTTTGTTATTA	-85678738	False	NA	-11	True	AATAAA	-17	NA	85678748	85677080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135_85678189_85678693
transcript_123641.known	chr6	-	1008	4	FSM	ENSG00000203875.13	ENST00000670327.1	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3227.74730526828	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAATTTTGGATTATGT	-85586093	True	NA	13	True	AATAAA	-2	NA	85678736	85677095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677790_85678033_85678135
transcript_123642.known	chr6	-	1345	3	FSM	ENSG00000203875.13	ENST00000670410.1	1345	3	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_1	262	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGTTCCTTTTTGTTATT	-85586093	True	NA	-12	True	AATAAA	-16	NA	85678736	85677081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677876_85677953
transcript_123643.known	chr6	-	947	4	FSM	ENSG00000203875.13	ENST00000657339.1	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3342.90834786451	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTTGTAATCAAATTAC	-85586093	True	NA	-15	True	ATTAAA	-17	NA	85678736	85677005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677794_85677876_85677953_85678033_85678135
transcript_123644.known	chr6	-	1022	3	FSM	ENSG00000203875.13	ENST00000669413.1	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_2	1005	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTGAGTGAATGTTTC	-85678738	False	NA	1	True	ATTAAA	-33	NA	85678748	85676989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85678189_85678693
transcript_123645.known	chr6	-	1258	4	FSM	ENSG00000203875.13	ENST00000657398.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	5990	junction_1	655.77045441899	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTTTTTGTTATTACTT	-85678738	False	NA	-8	True	AATAAA	-20	NA	85678748	85677077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677876_85677953_85678033_85678135
transcript_123646.known	chr6	-	1278	3	FSM	ENSG00000203875.13	ENST00000655881.1	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	6514	junction_2	77.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85586093	True	NA	-9	True	AATAAA	-19	NA	85678736	85677078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85677876_85677953
transcript_123647.known	chr6	-	438	5	FSM	ENSG00000203875.13	ENST00000433843.2	438	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_4	2956.64290200897	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTACGGATCTGGCTTCT	-85678738	False	NA	NA	False	NA	NA	NA	85678748	85677318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135_85678189_85678697
transcript_123648.known	chr6	-	1187	4	FSM	ENSG00000203875.13	ENST00000661360.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	6514	junction_2	464.188419598	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCCTTTTTGTTATTACT	-85678738	False	NA	-9	True	AATAAA	-19	NA	85678748	85677078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677493_85677794_85677876_85677953_85678033_85678135
transcript_123649.known	chr6	-	703	4	FSM	ENSG00000203875.13	ENST00000659811.1	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	3980	junction_3	1141.72685972706	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTTGTAATCAAATTA	-85678738	False	NA	-16	True	ATTAAA	-16	NA	85678748	85677006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_85677192_85677423_85677493_85677794_85678189_85678693
transcript_123650.known	chr6	+	12341	8	FSM	ENSG00000188994.13	ENST00000369577.8	12341	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	8.17412542909712	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGCCTTTAAACATTC	87150605	True	NA	25	True	ATTAAA	-33	NA	87155564	87265943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502_87245645_87254649
transcript_123653.nic	chr6	+	1289	7	ISM	ENSG00000188994.13	ENST00000369577.8	12341	8	-172	20229	-172	2147	5prime_fragment	FALSE	canonical	3	58	junction_5	8.69865890046659	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTGGCTCCCTTTTCA	87155381	False	NA	NA	False	AATAAA	-16	NA	87155392	87245714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87243474_87243612_87245502
transcript_123655.nnic	chr6	+	1726	6	NNC	ENSG00000188994.13	novel	12341	8	NA	NA	0	-8994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	29.329848277821	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAACCTA	87150605	True	NA	NA	False	NA	NA	NA	87155564	87234573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324_87233528_87233615
transcript_123657.known	chr6	+	1732	5	FSM	ENSG00000188994.13	ENST00000369578.6	1732	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	30.3840007240653	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGATGTCTCCAAGTCTAA	87150605	True	NA	NA	False	ATTAAA	-17	NA	87155564	87223936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87222769
transcript_123658.nic	chr6	+	1814	5	ISM	ENSG00000188994.13	ENST00000369577.8	12341	8	0	31370	0	-8994	5prime_fragment	FALSE	canonical	3	65	junction_4	6.75925291729789	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTTAAAGAAAACCTA	87150605	True	NA	NA	False	NA	NA	NA	87155564	87234573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595_87218732_87233324
transcript_123659.nic	chr6	+	640	4	ISM	ENSG00000188994.13	ENST00000369578.6	1732	5	-46	5176	-46	-4107	5prime_fragment	FALSE	canonical	3	69	junction_1	6.37704215656966	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAATTAGACTAGAAAAA	87155507	False	NA	NA	False	GATAAA	-31	NA	87155518	87218760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87155760_87215902_87216058_87216298_87216378_87218595
transcript_12366.known	chr1	-	1871	8	FSM	ENSG00000158850.15	ENST00000367998.5	1871	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	144.567052446473	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGCTCCTGCTTTCTGC	-161174401	True	NA	-20	True	AATAAA	-14	NA	161177497	161171311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176509_161177422
transcript_123663.known	chr6	+	770	3	FSM	ENSG00000188994.13	ENST00000496806.2	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATTTAGAAAACAAGAATG	87150661	True	NA	49	True	AATAAA	-31	NA	87155620	87260645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87155760_87215902_87215963_87260074
transcript_123673.known	chr6	+	737	6	FSM	ENSG00000111850.11	ENST00000369572.3	737	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5298221281347	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGCAGGAGAGCCAAAGCT	87319158	True	NA	NA	False	NA	NA	NA	87322619	87399599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87322633_87375461_87375711_87391779_87391836_87392724_87392843_87398242_87398378_87399433
transcript_12368.known	chr1	-	2414	8	FSM	ENSG00000158850.15	ENST00000622395.4	2414	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_6	81.0202796482814	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCTCCTGCTTTCTGCA	NA	False	NA	-19	True	AATAAA	-15	NA	161177968	161171310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161172090_161172226_161172332_161173604_161173728_161173858_161174050_161174992_161175229_161175807_161176096_161176433_161176580_161177422
transcript_123683.known	chr6	-	2279	3	FSM	ENSG00000164411.12	ENST00000525899.6	2279	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	10	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGGCTGTCATTGGTA	-87328990	True	NA	NA	False	AATAAA	-21	NA	87329278	87282979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87284940_87322865_87323044_87329137
transcript_123686.known	chr6	+	2405	3	FSM	ENSG00000111850.11	ENST00000229570.9	2405	3	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	34.5	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCAAAGATTCTGAACATT	87319131	True	NA	7	True	AATAAA	-15	NA	87322592	87342322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87322633_87337008_87337167_87340115
transcript_123694.nnic	chr6	+	1998	8	NNC	ENSG00000164414.19	novel	1854	8	NA	NA	-225	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_6	28.2076845804074	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	NA	False	NA	85	True	AATAAA	-17	NA	87472699	87512336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508467_87509040_87509176_87511398
transcript_123696.known	chr6	+	1854	8	FSM	ENSG00000164414.19	ENST00000369552.9	1854	8	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	5.8970764115858	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTTAATCACTTTAT	87472149	True	NA	85	True	AATAAA	-17	NA	87472973	87512336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87508419_87508597_87509040_87509176_87511398
transcript_123704.known	chr6	+	1720	7	FSM	ENSG00000164414.19	ENST00000369556.7	1720	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	33.0424810744526	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAGAATTGTTTAATCA	87472100	True	NA	79	True	AATAAA	-11	NA	87472924	87512330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87473020_87477361_87477540_87500507_87500668_87501157_87501311_87506381_87506449_87509040_87509176_87511398
transcript_123733.nnic	chr6	-	2014	20	ISM	ENSG00000146282.19	ENST00000693431.1	2361	21	5	461	0	4	5prime_fragment	FALSE	canonical	3	234	junction_19	87.8085931470885	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGGCTTTTAAAATG	-87583455	True	NA	-33	True	AATGAA	-41	NA	87590007	87514406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589700
transcript_123734.known	chr6	-	2242	20	FSM	ENSG00000146282.19	ENST00000369536.10	2242	20	0	0	0	0	multi-exon	TRUE	canonical	3	399	junction_19	60.3226780304434	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCATGGTCAGTAGGT	-87583435	True	NA	-5	True	AATAAA	-14	NA	87589987	87513937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87514500_87514956_87515021_87516805_87516881_87518168_87518265_87518629_87518740_87518823_87518892_87519582_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_123761.nic	chr6	-	1342	14	ISM	ENSG00000146282.19	ENST00000687437.1	1885	21	-4	5127	0	-2734	5prime_fragment	FALSE	canonical	3	399	junction_13	63.4840519506356	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTATGTTATTCTGGACT	-87583467	True	NA	-17	True	ATTAAA	-19	NA	87590019	87519539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_87519708_87520179_87520257_87521463_87521525_87524556_87524653_87529541_87529649_87530783_87530943_87541917_87541995_87545615_87545700_87548590_87548647_87555407_87555506_87562701_87562786_87564129_87564233_87569516_87569591_87589921
transcript_123782.known	chr6	+	2501	20	FSM	ENSG00000135336.16	ENST00000257789.4	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	128.498164941573	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584067	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656902_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_123785.known	chr6	+	2498	20	FSM	ENSG00000135336.16	ENST00000392844.8	2498	20	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_14	105.424192611618	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTGCAGTTGCTTTAGC	87584067	True	NA	16	True	AATAAA	-23	NA	87590134	87667451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_1238.known	chr1	-	446	2	FSM	ENSG00000116213.16	ENST00000479331.1	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAAACTCCAACGTAG	-3646681	True	NA	NA	False	TTTAAA	-1	NA	3650061	3647245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3647561_3649930
transcript_123801.known	chr6	+	2470	19	FSM	ENSG00000135336.16	ENST00000546266.5	2470	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	175.200775478863	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGCAGTTGCTTTAGCAA	87583999	True	NA	18	True	AATAAA	-25	NA	87590066	87667453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87603383_87603529_87605916_87606022_87607672_87607825_87609095_87609230_87612088_87612249_87616313_87616428_87621353_87621488_87621949_87622014_87634844_87634962_87636406_87636487_87653115_87653250_87656905_87656983_87657920_87658019_87663002_87663145_87664742_87664860_87665753_87665834_87667017
transcript_123813.nnic	chr6	+	506	5	NIC	ENSG00000135336.16	novel	2035	15	NA	NA	-13	-6021	combination_of_known_splicesites	FALSE	canonical	3	98	junction_3	347.196180134517	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCTTGTTCTTGGT	NA	False	NA	4	True	AATAAA	-18	NA	87590053	87603510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_87590193_87594352_87594408_87594526_87594614_87601783_87601882_87603383
transcript_123818.nnic	chr6	+	553	4	NNC	ENSG00000135336.16	novel	471	4	NA	NA	-12	6	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	406.849139389802	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTGGCCTTATAGTTT	87584050	True	NA	9	True	AATAAA	-23	NA	87590117	87595443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_87590193_87594352_87594408_87594526_87594614_87595107
transcript_123819.known	chr6	+	471	4	FSM	ENSG00000135336.16	ENST00000468486.2	471	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	388.868443907019	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTACCACCTTGGCCTTA	87584062	True	NA	3	True	AATAAA	-17	NA	87590129	87595437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_87590193_87594352_87594408_87594526_87594614_87595171
transcript_123824.nic	chr6	+	782	4	ISM	ENSG00000135336.16	ENST00000681069.1	2035	15	-82	53515	-13	-5658	5prime_fragment	FALSE	canonical	3	633	junction_3	131.780963049381	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGTTTTCATACTTTT	NA	False	NA	5	True	AATAAA	-20	NA	87590053	87603873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_87590193_87594352_87594408_87601783_87601882_87603383
transcript_123829.known	chr6	-	1898	5	FSM	ENSG00000135334.9	ENST00000257787.6	1898	5	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_3	16.1012421881046	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTTCCAGGAATCAGTG	-87693706	True	NA	-12	True	AATAAA	-21	NA	87702233	87674859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_87675608_87675859_87675932_87677817_87677968_87681619_87681764_87701449
transcript_123834.known	chr6	-	4825	16	FSM	ENSG00000111880.16	ENST00000369485.9	4825	16	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_5	29.1575033224726	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGTCGTGAACTACCAAA	-88957525	True	NA	NA	False	AATAAA	-14	NA	88963618	88609896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_88612883_88614271_88614396_88678352_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_123838.known	chr6	-	2017	14	FSM	ENSG00000111880.16	ENST00000627296.1	2017	14	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	31.2434608542947	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGTGAAT	-88957468	True	NA	NA	False	NA	NA	NA	88963561	88677993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_88678420_88769773_88769875_88801563_88801633_88844356_88844522_88849754_88849827_88853628_88853765_88890494_88890597_88891805_88891916_88904714_88904956_88906364_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_123843.nic	chr6	-	739	5	ISM	ENSG00000111880.16	ENST00000538899.2	1374	12	-234	136533	-25	-136533	5prime_fragment	FALSE	canonical	3	208	junction_3	24.4642596454501	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCAGAATTTTGTATTGT	-88957550	True	NA	NA	False	AATAAA	-20	NA	88963643	88906302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_88906441_88928984_88929074_88929163_88929268_88941070_88941181_88963345
transcript_123847.nic	chr6	-	1405	2	ISM	ENSG00000111880.16	ENST00000538899.2	1374	12	-234	170304	-25	-170304	5prime_fragment	FALSE	canonical	3	227	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAAACTGGGGC	-88957550	True	NA	NA	False	AAAAAG	-11	NA	88963643	88940073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_88941181_88963345
transcript_123849.nnic	chr6	+	1686	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-80	-322	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	16	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	89081686	False	NA	18	True	TTTAAA	-31	NA	89081755	89084838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_89082166_89082545_89082736_89083752
transcript_123850.nnic	chr6	+	1490	3	NNC	ENSG00000146278.11	novel	1345	2	NA	NA	-44	-322	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCTTGACTCTTTGTGTG	89081598	True	NA	18	True	TTTAAA	-31	NA	89081791	89084838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_89082011_89082550_89082736_89083752
transcript_123851.known	chr6	+	816	2	FSM	ENSG00000146278.11	ENST00000369472.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATATTTTGTAAATA	89074694	True	NA	NA	False	TTTAAA	-27	NA	89080750	89084345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_89080974_89083752
transcript_123853.known	chr6	-	3589	5	FSM	ENSG00000154548.9	ENST00000452027.3	3589	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	36.8264510915727	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCTGTGATCAGTTCTT	-89117173	True	NA	-1	True	AATAAA	-19	NA	89118071	89095958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89098948_89105118_89105261_89105426_89105531_89107153_89107259_89117822
transcript_123860.known	chr6	-	4164	8	FSM	ENSG00000198833.7	ENST00000435041.3	4164	8	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	14.6747040438814	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTTTGACCAAAGGT	-89352657	False	2077	-5	True	AATAAA	-20	NA	89352722	89326624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89329958_89333085_89333206_89335301_89335432_89338204_89338311_89338458_89338544_89342323_89342456_89343682_89343757_89352538
transcript_123868.nic	chr6	-	1481	7	NIC	ENSG00000025039.15	novel	4923	7	NA	NA	-68	-2872	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	62.4944441975089	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATATTAACAGTGATG	-89411553	False	NA	-13	True	AATAAA	-22	NA	89411573	89367869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_89368208_89372436_89372586_89377670_89377814_89379223_89379339_89380167_89380368_89387294_89387591_89411333
transcript_123877.known	chr6	-	608	3	FSM	ENSG00000083099.11	ENST00000523075.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	106.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACTAACAAATGGCCAGTA	-89638385	False	NA	17	True	AAGAAA	-5	NA	89638432	89637047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89637354_89637741_89637883_89638271
transcript_123878.known	chr6	-	565	3	FSM	ENSG00000083099.11	ENST00000521961.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	21	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTGGACACAATCATTAG	-89638436	False	2640	38	True	AAGAAA	-26	NA	89638483	89637026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89637354_89637724_89637883_89638403
transcript_123879.known	chr6	-	677	3	FSM	ENSG00000083099.11	ENST00000520318.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	124.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCAGGAGTTCAAGACCAG	-89636109	True	NA	NA	False	NA	NA	NA	89638749	89636912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89637354_89637724_89637883_89638671
transcript_123888.known	chr6	-	791	3	FSM	ENSG00000083099.11	ENST00000520441.5	791	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	154.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAAGCATTTACTCTG	-89636094	True	NA	NA	False	NA	NA	NA	89638734	89621378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89621949_89637724_89637883_89638671
transcript_123889.known	chr6	-	18485	102	FSM	ENSG00000112159.12	ENST00000369393.8	18485	102	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_91	174.477519085438	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGCATCCCACTCAC	-89800164	True	NA	NA	False	TATAAA	-24	NA	89819794	89642497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_89644194_89645014_89645158_89646539_89646604_89648031_89648147_89648255_89648330_89650023_89650199_89650731_89650848_89652191_89652282_89652991_89653156_89654163_89654335_89655763_89655969_89656699_89656802_89658208_89658371_89658609_89658918_89661430_89661579_89662086_89662240_89662791_89662968_89664486_89664629_89668013_89668152_89670918_89671081_89672199_89672364_89672546_89672703_89673235_89673463_89674103_89674590_89675463_89675580_89676101_89676208_89677569_89677697_89678598_89678746_89680588_89680752_89683131_89683331_89683830_89683905_89684875_89684986_89685826_89685974_89686901_89687024_89687343_89687439_89688077_89688174_89688572_89688809_89689869_89690144_89690672_89690835_89692442_89693149_89694073_89694184_89695604_89695993_89696359_89696575_89698864_89699036_89699600_89699728_89700062_89700295_89700645_89700857_89701557_89701679_89701903_89702062_89706058_89706193_89707360_89707477_89708495_89708629_89710680_89710795_89712035_89712257_89712574_89712787_89713147_89713297_89714542_89714752_89715652_89715770_89716649_89716810_89718365_89718628_89718766_89719031_89719135_89719226_89722954_89723144_89723511_89723620_89725198_89725397_89727832_89727956_89728930_89729140_89730725_89730924_89732556_89732776_89738325_89738456_89740233_89740379_89743149_89743281_89743575_89743715_89745272_89745412_89745491_89745627_89747328_89747471_89749222_89749370_89749542_89749752_89750353_89750533_89751430_89751583_89753511_89753623_89754082_89754231_89756276_89756391_89758254_89758352_89758815_89758961_89761644_89761749_89762318_89762531_89771560_89771622_89772572_89772722_89774620_89774734_89776599_89776696_89780211_89780294_89781398_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_12389.known	chr1	+	813	6	FSM	ENSG00000143224.18	ENST00000544598.5	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	141.802679805425	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTGGCTGTTCTATCA	161164250	True	NA	21	True	AATAAA	-18	NA	161166469	161171220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161170906_161170950_161171033
transcript_123893.nic	chr6	-	2581	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-71	137136	0	-31425	5prime_fragment	FALSE	canonical	2	23	junction_4	6.43102050155013	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGGAAATGGCATCTC	-89800164	True	NA	NA	False	NA	NA	NA	89819794	89780647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_123894.nic	chr6	-	2413	10	ISM	ENSG00000112159.12	ENST00000629399.2	17400	102	-71	137304	0	-31593	5prime_fragment	FALSE	canonical	2	23	junction_4	6.43102050155013	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAC	-89800164	True	NA	NA	False	ACTAAA	-13	NA	89819794	89780815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_89781593_89785011_89785127_89787853_89787958_89789779_89789912_89790158_89790402_89793761_89793955_89794099_89794208_89794576_89794802_89803327_89803555_89819505
transcript_123898.nnic	chr6	+	631	2	Antisense	novelGene_ENSG00000112159.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAACAAACAGAATGGGT	NA	False	NA	NA	False	AATAAA	-29	NA	89721146	89721816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_89721433_89721471
transcript_123906.nnic	chr6	+	1421	8	NNC	ENSG00000118412.13	novel	1300	8	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	38.614790441181	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATTCGAATGTTTCTT	89825674	True	NA	19	True	AATAAA	-22	NA	89829870	89874436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89871288_89871389_89873756
transcript_123914.known	chr6	+	1153	7	FSM	ENSG00000118412.13	ENST00000552401.5	1153	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	31.4081553457414	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825697	True	NA	NA	False	TATAAA	-24	NA	89829893	89862793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_89829935_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_123916.known	chr6	+	1280	7	FSM	ENSG00000118412.13	ENST00000419040.6	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	22.6544084500616	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGAAGAAAGAAAAGTT	89825703	True	NA	NA	False	TATAAA	-24	NA	89829899	89862793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_89830068_89846561_89846645_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_123922.nnic	chr6	+	1460	6	NIC	ENSG00000118412.13	novel	1153	7	NA	NA	-26	364	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	37.992630864419	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGCATATTAGAAATGAAA	89825671	True	NA	58	True	AAGAAA	-14	NA	89829867	89863157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_89829935_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_123924.nnic	chr6	+	1580	6	NIC	ENSG00000118412.13	novel	1280	7	NA	NA	-13	364	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	36.1474757071638	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGGCATATTAGAAATGAAA	89825684	True	NA	58	True	AAGAAA	-14	NA	89829880	89863157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_89830068_89853165_89853235_89854816_89854918_89855469_89855545_89857083_89857200_89862125
transcript_123928.known	chr6	-	4830	16	FSM	ENSG00000135341.18	ENST00000369332.7	4830	16	0	0	0	0	multi-exon	TRUE	canonical	3	313	junction_5	32.9176750900384	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAAGTGGTGAATGACT	-90581617	True	NA	-8	True	AATAAA	-27	NA	90587045	90513572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_90516682_90518446_90518563_90519257_90519320_90523677_90523784_90536336_90536402_90547257_90547388_90548046_90548178_90550467_90550550_90552048_90552180_90553457_90553587_90556499_90556625_90560075_90560215_90561621_90561668_90568557_90568624_90571696_90571808_90586763
transcript_123931.known	chr6	-	1885	3	FSM	ENSG00000135333.15	ENST00000369297.1	1885	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGTCTCTTTTTAACTT	-93417915	True	NA	NA	False	AATAAA	-17	NA	93419547	93409653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_93411171_93414702_93414768_93419244
transcript_123937.known	chr6	+	4578	5	FSM	ENSG00000172469.17	ENST00000358812.9	4578	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	9.01041064547005	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTAGATATTAAAGTCTAT	95575932	True	NA	-29	True	AATAAA	-23	NA	95577534	95609452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_95577639_95586401_95586984_95596736_95596847_95604826_95604904_95605747
transcript_123940.known	chr6	+	1845	3	FSM	ENSG00000172469.17	ENST00000683172.1	1845	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAATTGAGAAAACA	95575950	True	NA	NA	False	ATTAAA	-4	NA	95577552	95597913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_95577639_95586401_95586984_95596736
transcript_123941.known	chr6	+	3399	2	FSM	ENSG00000172469.17	ENST00000369293.6	3399	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTATCCTCTTGTAT	95575882	True	NA	NA	False	AGTAAA	-14	NA	95577484	95589646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_95577639_95586401
transcript_123948.known	chr6	+	4226	19	FSM	ENSG00000014123.10	ENST00000369278.5	4226	19	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_11	15.9494765578415	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTACTTTGAAGCT	96520616	True	NA	67	True	AATAAA	-19	NA	96521805	96555276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893_96543017_96548163_96548282_96549411_96549579_96549668_96549800_96551432_96551514_96551837_96551924_96552481_96552663_96553284
transcript_123951.nic	chr6	+	1454	12	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-33	12309	-33	-12309	5prime_fragment	FALSE	canonical	3	68	junction_11	13.5127732654076	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGAAAAGATGATGATAG	96520583	True	NA	NA	False	ATTAAA	-16	NA	96521772	96542967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534_96540656_96542893
transcript_123952.nic	chr6	+	1356	11	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-33	14645	-33	-14645	5prime_fragment	FALSE	canonical	3	75	junction_10	11.8663389467856	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAGCGAAGAAGGAAAGCA	96520583	True	NA	NA	False	AGTAAA	-14	NA	96521772	96540631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_96521951_96523145_96523292_96524381_96524411_96525296_96525395_96526320_96526436_96528501_96528633_96534262_96534322_96536243_96536391_96537373_96537550_96538630_96538811_96540534
transcript_123954.nic	chr6	+	1212	2	ISM	ENSG00000014123.10	ENST00000369278.5	4226	19	-33	31097	-33	1215	5prime_fragment	FALSE	canonical	3	106	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATTGAAAGTAAGTTATT	96520583	True	NA	NA	False	TTTAAA	-10	NA	96521772	96524179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_96521951_96523145
transcript_123955.known	chr6	+	458	2	FSM	ENSG00000014123.10	ENST00000461673.1	458	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCTGAAAGGTTTTTT	96521582	False	NA	NA	False	AATAAA	-24	NA	96521594	96522964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_96521951_96522862
transcript_123957.nnic	chr6	-	665	3	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-118	-480	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTGCCCACAAAGAT	-96836347	True	NA	-14	True	AATAAA	-23	NA	96837595	96794604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_96794730_96799669_96799882_96837267
transcript_123959.nnic	chr6	-	1313	3	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-120	-36904	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTGAGCTGTGTGT	-96836349	True	NA	4	True	AATAAA	-25	NA	96837597	96831028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_96831899_96836264_96836378_96837267
transcript_12396.known	chr1	+	816	5	FSM	ENSG00000143224.18	ENST00000497522.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	178.490020729451	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGGCGTCCTCTACCTTT	161164210	True	NA	NA	False	GGGGCT	-41	NA	161166429	161177041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166673_161166839_161166935_161167099_161167235_161170619_161170770_161176848
transcript_123960.known	chr6	-	5967	2	FSM	ENSG00000112218.9	ENST00000229955.4	5967	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGTGGAGTTTTTTTTAA	-96836229	True	NA	-1	True	AATAAA	-18	NA	96837477	96794124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_96799882_96837267
transcript_123962.nnic	chr6	-	1208	2	NNC	ENSG00000112218.9	novel	5967	2	NA	NA	-128	-36904	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTTGAGCTGTGTGT	NA	False	NA	4	True	AATAAA	-25	NA	96837605	96831028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_96831899_96837267
transcript_123968.known	chr6	-	2407	3	FSM	ENSG00000123545.6	ENST00000316149.8	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_1	79.5	5581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCAGTCCTATACTGCG	-96882407	True	NA	-3	True	AATAAA	-19	NA	96897891	96889314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_96891392_96896743_96896848_96897665
transcript_123980.nnic	chr6	-	2518	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-47	-1185	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGGAAAGGAAATTCAGT	-97281053	True	NA	NA	False	AAAAAG	-8	NA	97283264	97260847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_123984.nic	chr6	-	2194	10	NIC	ENSG00000146263.12	novel	5907	7	NA	NA	-47	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_1	21.0648616198096	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCAGGTTTGTCTGT	-97281053	True	NA	-4	True	AATAAA	-15	NA	97283264	97258662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_97259670_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_123987.nnic	chr6	-	1885	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-47	-1818	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAGAATATATATTTACT	-97281053	True	NA	-1	True	AATAAA	-15	NA	97283264	97261480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_123990.nnic	chr6	-	1553	10	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-47	-2150	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	16.2123257484187	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAAGGCATTGAATTCTG	-97281053	True	NA	NA	False	AAAAAG	-10	NA	97283264	97261812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97262179_97263334_97263449_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_123999.nnic	chr6	-	1640	9	NNC	ENSG00000146263.12	novel	5907	7	NA	NA	-47	2167	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	23.6137539370596	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAGTCATCTAAATCAT	-97281053	True	NA	NA	False	AATAAA	-25	NA	97283264	97263552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_97264120_97267871_97268003_97269901_97269993_97272703_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_1240.known	chr1	-	988	1	FSM	ENSG00000227372.12	ENST00000624167.1	988	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAATTTGCATTTTCTCC	-3736578	False	NA	-4	True	TATAAA	-29	NA	3736588	3735600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3735600_3736600
transcript_124004.nic	chr6	-	1106	6	ISM	ENSG00000146263.12	ENST00000683635.1	8574	25	-48	130288	-47	-4545	5prime_fragment	FALSE	canonical	3	53	junction_5	11.3595774569303	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAACATAGTAGTCATTG	-97281053	True	NA	NA	False	AATAAA	-19	NA	97283264	97272448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_97272882_97272974_97273063_97278848_97278899_97281236_97281363_97282313_97282554_97283095
transcript_12401.known	chr1	+	473	4	FSM	ENSG00000143224.18	ENST00000462866.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_1	165.783660902461	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161166796	False	NA	19	True	AATAAA	-16	NA	161166839	161171218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166935_161170619_161170770_161170906_161170950_161171033
transcript_124035.known	chr6	+	786	7	FSM	ENSG00000271860.8	ENST00000668574.1	786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2956320754371	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTACTGAGTTTTTCGTTA	NA	False	NA	1	True	ATTAAA	-15	NA	97816661	98114591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_97816757_97828048_97828207_97969405_97969467_97972525_97972671_98099185_98099271_98113798_98113861_98114411
transcript_124039.nnic	chr6	+	1055	6	NNC	ENSG00000271860.8	novel	1006	8	NA	NA	-36699	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_3	15.038616957686	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAATGATTAGATCGA	97775729	True	NA	9	True	AATAAA	-23	NA	97779841	98398863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_97780096_97828048_97828207_97969405_97969467_98099185_98099271_98275163_98275268_98398470
transcript_12404.known	chr1	+	1686	13	FSM	ENSG00000143224.18	ENST00000352210.9	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	96.5471603241994	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTGGCTGTTCTAT	161164190	True	NA	19	True	AATAAA	-16	NA	161166409	161171218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161166612_161166839_161166935_161167099_161167235_161167370_161167487_161167994_161168128_161168431_161168577_161168992_161169184_161169659_161169721_161169905_161170025_161170408_161170520_161170619_161170770_161170906_161170950_161171033
transcript_12407.known	chr1	+	1415	14	FSM	ENSG00000158864.13	ENST00000677837.1	1415	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	566.407792127058	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCCTGTTCCTCACTGGA	161187268	True	NA	NA	False	NA	NA	NA	161202364	161214239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161212591_161212655_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_12408.known	chr1	+	2319	14	FSM	ENSG00000158864.13	ENST00000496553.6	2319	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	379.291616276335	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161201680	161214381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161203402_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_124083.nnic	chr6	+	1149	3	NIC	ENSG00000271860.8	novel	1397	7	NA	NA	-119	-17138	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	13.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGCAAGAATCTTTT	NA	False	NA	NA	False	NA	NA	NA	97978882	98275476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_97979634_98099185_98099271_98275163
transcript_124084.nnic	chr6	+	1458	2	NNC	ENSG00000271860.8	novel	578	6	NA	NA	-36699	932	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCTAAGCAGTGCAGAAA	97775729	True	NA	19	True	NA	NA	NA	97779841	97829252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_97780096_97828048
transcript_124086.nnic	chr6	-	3413	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTGTTAATTAAAGTG	-97783526	False	NA	-3	True	AATAAA	-40	NA	97783625	97773941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_97775711_97781981
transcript_124088.nnic	chr6	-	2698	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATGTGTTAATTAAAGTG	-97782792	False	NA	-3	True	AATAAA	-40	NA	97782891	97773941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_97775730_97781981
transcript_124091.nnic	chr6	-	1901	2	Antisense	novelGene_ENSG00000271860.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	17	junction_1	0	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACACTCAATTGTTCA	-97781236	False	NA	-25	True	AATAAA	-34	NA	97781335	97773963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_97775730_97781200
transcript_124096.known	chr6	-	8058	10	FSM	ENSG00000112234.9	ENST00000369244.7	8058	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_8	11.8769410369447	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCACTTTCAAAATTGATC	-98946027	True	NA	1	True	AATAAA	-22	NA	98947946	98868534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98934761_98934880_98947805
transcript_124099.known	chr6	-	2810	9	FSM	ENSG00000112234.9	ENST00000229971.2	2810	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	16.8295684733745	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCTAGCGACACAGGAGG	-98946087	True	NA	NA	False	NA	NA	NA	98948006	98873724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_98874442_98875414_98875728_98880552_98880625_98899267_98899482_98905425_98905671_98917373_98917720_98926476_98927061_98927704_98927823_98947805
transcript_12410.known	chr1	+	1508	13	FSM	ENSG00000158864.13	ENST00000677948.1	1508	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	494.778373505642	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187268	True	NA	19	True	AATAAA	-16	NA	161202364	161214381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161209596_161209842_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_124105.nnic	chr6	-	463	3	NNC	ENSG00000112234.9	novel	8058	10	NA	NA	20	-54603	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTACATCTCCCTTCTT	-98946067	True	NA	NA	False	AAAAAG	-5	NA	98947986	98928327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_98928492_98934761_98934880_98947805
transcript_124107.known	chr6	-	11528	6	FSM	ENSG00000146267.12	ENST00000389677.6	11528	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	26.0921444116807	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTACTGTTTCTTGACTC	-99349634	False	NA	NA	False	AATACA	-14	NA	99349674	99271167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99281454_99291703_99291821_99323443_99323668_99333350_99333548_99342897_99343034_99349106
transcript_124123.known	chr6	-	1325	7	FSM	ENSG00000132423.12	ENST00000254759.8	1325	7	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_3	32.1683937360191	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCGTGATCTAGGAGTGTA	-99391385	True	NA	-7	True	AATAAA	-17	NA	99394195	99369400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99369821_99371427_99371588_99375939_99376183_99377385_99377486_99380188_99380342_99383697_99383825_99394073
transcript_12414.known	chr1	+	1934	11	FSM	ENSG00000158864.13	ENST00000677471.1	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	374.802094444522	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	161187268	True	NA	19	True	AATAAA	-16	NA	161202364	161214381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161202481_161206406_161206598_161209192_161209314_161209482_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_124156.known	chr6	-	646	3	FSM	ENSG00000132423.12	ENST00000369240.5	646	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	174	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTGCGTGATCTAGGAGT	NA	False	NA	-10	True	AATAAA	-14	NA	99377454	99369403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99369821_99371427_99371588_99377385
transcript_124159.known	chr6	-	5243	12	FSM	ENSG00000132424.17	ENST00000681615.1	5243	12	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_11	201.824447077198	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCATGATATTACAGTT	-99412935	True	NA	NA	False	AATACA	-2	NA	99425329	99397628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99400312_99400543_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_12416.known	chr1	-	1961	2	FSM	ENSG00000158859.10	ENST00000367995.3	1961	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGAACTCCTCTGTGT	-161197955	True	NA	NA	False	AATAAA	-16	NA	161199053	161195978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161196881_161197994
transcript_124161.known	chr6	-	3142	11	FSM	ENSG00000132424.17	ENST00000438806.5	3142	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_10	211.324489825481	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCACCTTAATTTTAT	-99412937	True	NA	-12	True	AATAAA	-25	NA	99425331	99399963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_12417.known	chr1	+	1891	15	FSM	ENSG00000158864.13	ENST00000678507.1	1891	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	366.09163707287	2356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGGCCTAAACTTCTG	NA	False	NA	19	True	AATAAA	-16	NA	161197415	161214381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161197488_161202146_161202481_161203436_161203544_161206406_161206598_161209192_161209314_161209482_161209596_161209856_161209932_161210110_161210189_161210303_161210390_161210590_161210711_161212350_161212481_161213379_161213476_161213648_161213733_161213863_161213922_161214155
transcript_124174.nic	chr6	-	1591	6	ISM	ENSG00000132424.17	ENST00000438806.5	3142	11	-651	8189	-651	0	5prime_fragment	FALSE	canonical	3	100	junction_5	278.646729749337	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAAAAAAGGCCAC	-99425914	True	NA	5	True	AAGAAA	-43	NA	99425982	99408152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99425214
transcript_124184.known	chr6	+	2588	2	FSM	ENSG00000228506.3	ENST00000418945.3	2600	2	9	3	9	-3	multi-exon	FALSE	canonical	3	16	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTGATGGTATTTTATT	99424544	True	NA	NA	False	AATAAA	-19	NA	99424921	99432323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99425899_99430712
transcript_124187.known	chr6	-	2422	11	FSM	ENSG00000132424.17	ENST00000478777.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	76.6234950912578	2056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAAGAAAAACAAGG	-99412914	True	NA	91	True	AAAAAG	-6	NA	99425308	99401460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99401631_99402539_99402711_99403828_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_124188.known	chr6	-	2862	12	FSM	ENSG00000132424.17	ENST00000681611.1	2862	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	223.265990422498	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATCTAAAGGAAATAAATCA	-99412921	True	NA	-48	True	NA	NA	NA	99425315	99398988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99400312_99402539_99402711_99403828_99403883_99404602_99404703_99406030_99406169_99408080_99408272_99409172_99409345_99410740_99410965_99412550_99412740_99414571_99414691_99416348_99416429_99425214
transcript_124189.known	chr6	-	2850	3	FSM	ENSG00000132424.17	ENST00000466057.1	2850	3	0	0	0	0	multi-exon	FALSE	canonical	3	792	junction_2	51	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAACTTAGTCAGGCA	-99412864	True	NA	NA	False	NA	NA	NA	99425258	99411790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99412740_99414571_99416429_99425214
transcript_12419.known	chr1	-	474	4	FSM	ENSG00000158874.11	ENST00000367990.7	474	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.471404520791032	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	-161223589	False	NA	NA	False	AATAAA	-16	NA	161223628	161222291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223051_161223349_161223426_161223594
transcript_124197.known	chr6	-	1035	12	FSM	ENSG00000112237.13	ENST00000523799.5	1035	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	389.0956456806	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATATTGGAAAGTGATT	NA	False	NA	NA	False	AATGAA	-22	NA	99568825	99543447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568717
transcript_124202.known	chr6	-	958	11	FSM	ENSG00000112237.13	ENST00000523985.5	958	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	398.020715541289	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAATGAATAGCTTGT	-99558775	True	NA	NA	False	AATAAA	-40	NA	99568660	99543474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99568495
transcript_12421.known	chr1	-	401	3	FSM	ENSG00000158874.11	ENST00000463812.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCCTGGTATGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	161223631	161222291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161222523_161222917_161223051_161223594
transcript_124230.known	chr6	+	2082	5	FSM	ENSG00000279170.3	ENST00000607332.2	2082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	28.9082600652478	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGTGTTCCTTTTTTTTT	99519701	True	NA	NA	False	AATAAA	-25	NA	99520975	99569096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631_99531791_99567565
transcript_124232.known	chr6	+	5571	5	FSM	ENSG00000279170.3	ENST00000623858.2	5571	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	27.6315037592962	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTTCATAATATTGTCCA	99519701	True	NA	NA	False	AGTAAA	-16	NA	99520975	99589899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631_99531791_99584879
transcript_12424.known	chr1	+	2790	10	FSM	ENSG00000158882.15	ENST00000367988.8	2790	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	15.1053910742547	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATGTTTCACCAACCC	161225436	True	NA	13	True	AGTAAA	-17	NA	161226059	161230746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227635_161227738_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_124242.known	chr6	+	1873	4	FSM	ENSG00000279170.3	ENST00000452647.3	1873	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	6.0184900284226	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATAAATAAAATAAAAAT	99519774	True	NA	NA	False	NA	NA	NA	99521048	99533185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531362_99531537_99531631
transcript_124247.known	chr6	+	3895	4	FSM	ENSG00000279170.3	ENST00000652704.1	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	28.3313724811677	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTACTTTC	99519758	True	NA	1	True	AATAAA	-18	NA	99521032	99553800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99550225
transcript_124251.known	chr6	+	4376	4	FSM	ENSG00000279170.3	ENST00000651400.1	4376	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	30.5068298363935	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTTGATGTAGTTTGGAT	99519743	True	NA	NA	False	ATTAAA	-16	NA	99521017	99579693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99526063_99526110_99531631_99531791_99575652
transcript_124259.known	chr6	+	336	3	FSM	ENSG00000279170.3	ENST00000636394.1	336	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	29	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTTATTTAGCCGGA	99519800	True	NA	NA	False	AGTAAA	-23	NA	99521074	99531720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_99521148_99531362_99531537_99531631
transcript_124265.known	chr6	-	5878	18	FSM	ENSG00000123552.18	ENST00000500704.7	5878	18	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	35.4342316847213	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGGTGTATTAACAAAAAT	-99510849	True	NA	-2	True	AATAAA	-14	NA	99515423	99432324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99435847_99437245_99437400_99439768_99439856_99443564_99443663_99445796_99446464_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_124266.known	chr6	-	1741	14	FSM	ENSG00000123552.18	ENST00000506871.5	1741	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	45.8291140249044	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAAATGTGTAGTGATTT	-99510217	False	NA	NA	False	ATTAAA	-1	NA	99510230	99462463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468099_99468171_99468536_99468619_99476142_99476231_99482752_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120
transcript_124267.known	chr6	-	658	6	FSM	ENSG00000123552.18	ENST00000496090.6	658	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	19.9739830779942	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATATAGGACAGTTAAAT	NA	False	NA	-4	True	AATAAA	-20	NA	99476207	99462597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99462816_99464603_99464748_99465079_99465137_99466671_99466764_99468536_99468619_99476142
transcript_124268.known	chr6	-	1444	8	FSM	ENSG00000123552.18	ENST00000329966.10	1444	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	16.4527771987291	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTAATGCATTCATGTAT	-99510915	True	NA	-5	True	AATAAA	-21	NA	99515489	99482261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99482884_99488199_99488296_99488680_99488821_99503764_99503866_99507427_99507532_99508609_99508783_99510120_99510231_99515391
transcript_124269.known	chr6	-	2153	12	FSM	ENSG00000112237.13	ENST00000520429.6	2153	12	0	0	0	0	multi-exon	FALSE	canonical	3	1180	junction_7	91.1844919394078	2517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	-99558775	True	NA	-20	True	AATAAA	-20	NA	99568660	99542386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_12427.known	chr1	+	2807	9	FSM	ENSG00000158882.15	ENST00000545897.5	2807	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	23.8455315520539	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTCAATGTTTCACCAAC	NA	False	NA	11	True	AGTAAA	-15	NA	161225938	161230744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161226137_161226354_161226605_161226887_161226956_161227257_161227351_161227883_161227990_161228185_161228309_161228427_161228505_161228714_161228818_161228955
transcript_124270.known	chr6	-	1426	12	FSM	ENSG00000112237.13	ENST00000518714.5	1426	12	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	349.077035709174	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTTAGTCTTCTGGAT	-99558777	True	NA	NA	False	AATAAA	-14	NA	99568662	99543779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99544274_99545111_99545231_99546394_99546475_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_124271.known	chr6	-	2212	13	FSM	ENSG00000112237.13	ENST00000326298.8	2212	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	499.66741021737	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACTAGTGTCTTGAATTT	-99558746	True	NA	-20	True	AATAAA	-20	NA	99568631	99542386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_99543610_99545111_99545231_99546394_99546475_99549311_99549400_99549507_99549576_99550217_99550310_99550992_99551029_99551839_99551896_99558496_99558549_99561366_99561437_99561596_99561682_99562841_99562949_99568495
transcript_124276.known	chr6	-	8111	42	FSM	ENSG00000112249.14	ENST00000369162.7	8111	42	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_25	65.6298183126763	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGGGGAACCA	-100870383	True	NA	-15	True	AATAAA	-18	NA	100881329	100508193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_100509534_100509931_100510108_100512708_100512919_100516179_100516328_100517990_100518143_100540162_100540388_100589633_100589769_100589947_100590060_100601809_100601936_100605567_100605701_100606739_100606861_100606950_100607089_100625191_100625335_100627589_100627711_100627841_100627988_100629014_100629182_100631127_100631214_100638600_100638822_100642580_100642750_100644030_100644130_100646614_100646770_100647225_100647452_100650537_100650715_100651559_100651647_100652724_100652890_100655698_100655819_100661805_100662031_100662344_100662537_100679617_100679753_100715461_100715534_100718074_100718252_100725538_100725704_100766564_100766706_100767144_100767346_100798712_100798839_100799430_100799573_100800299_100800505_100805759_100805881_100848147_100848708_100864063_100864215_100867907_100868039_100881060
transcript_124277.known	chr6	-	852	4	FSM	ENSG00000112249.14	ENST00000324723.10	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	140.292551477261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCACTTTGACGAACTGCCA	-100870402	True	NA	NA	False	NA	NA	NA	100881348	100848419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_100848708_100864063_100864215_100867907_100868033_100881060
transcript_124278.known	chr6	-	3433	4	FSM	ENSG00000112249.14	ENST00000369143.2	3433	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	137.18114544888	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTATTTTTATATTTGTG	-100870365	True	NA	-5	True	AATAAA	-20	NA	100881311	100856302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_100859203_100864063_100864215_100867907_100868039_100881060
transcript_124288.known	chr6	+	1517	1	FSM	ENSG00000260000.2	ENST00000565695.2	1517	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACTTTATTTTTACTT	100881300	True	NA	NA	False	AATAAA	-16	NA	100881470	100882987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_100881500_100883000
transcript_124294.known	chr6	-	4575	24	FSM	ENSG00000085382.12	ENST00000262903.9	4575	24	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_18	14.2461482871966	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTGGCTTATGTCTGT	NA	False	NA	-8	True	AATAAA	-16	NA	104859919	104728093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_104729765_104730302_104730417_104744159_104744231_104744511_104744611_104750340_104750473_104771192_104771390_104771924_104772075_104776740_104776829_104777012_104777111_104777205_104777318_104784085_104784174_104784416_104784486_104784984_104785320_104791503_104791655_104795578_104795686_104796654_104796757_104796928_104797026_104811310_104811394_104833041_104833174_104843222_104843299_104849141_104849247_104850906_104850997_104852316_104852372_104859566
transcript_124295.known	chr6	+	2635	5	FSM	ENSG00000187772.8	ENST00000637759.1	2635	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	102.150318159074	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGACGAAAATGCCTCAG	104940855	False	NA	96	True	NA	NA	NA	104940865	105080479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_104941013_104950460_104950510_104958098_104958287_105026297_105026483_105078413
transcript_124296.known	chr6	+	5446	4	FSM	ENSG00000187772.8	ENST00000345080.5	5446	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	122.453619337645	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTTTTGGAGATTTT	104955862	True	NA	15	True	AATAAA	-21	NA	104957106	105083332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_104957261_104958098_104958287_105026297_105026483_105078413
transcript_1243.known	chr1	+	506	4	FSM	ENSG00000235169.11	ENST00000642557.4	506	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	10.9848380355227	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	3772020	True	NA	26	True	AATAAA	-35	NA	3772748	3775956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_3772789_3773062_3773182_3775298_3775484_3775794
transcript_12430.known	chr1	+	1406	3	FSM	ENSG00000248485.2	ENST00000504449.2	1406	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTTTTTTTCTTGGGA	161258492	True	NA	NA	False	AATAAA	-32	NA	161258744	161285450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161258984_161283667_161283723_161284338
transcript_124310.nnic	chr6	-	623	4	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	52	-1799	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.816496580927726	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	-104940426	False	NA	-5	True	AATAAA	-23	NA	104940475	104926499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_104926883_104931478_104931547_104940177_104940214_104940339
transcript_124316.nnic	chr6	-	555	3	NNC	ENSG00000203809.7	novel	2425	3	NA	NA	52	-1799	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	3	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTACAGAGGCATATGGT	-104940426	False	NA	-5	True	AATAAA	-23	NA	104940475	104926499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_104926883_104940177_104940214_104940339
transcript_124319.known	chr6	-	2425	3	FSM	ENSG00000203809.7	ENST00000668527.1	2425	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGCTGAGGCAGGAGAA	-104940995	False	NA	NA	False	NA	NA	NA	104941044	104924700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_104926883_104940177_104940214_104940837
transcript_12432.known	chr1	-	366	2	FSM	ENSG00000158887.19	ENST00000488271.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGACAAGTGATCGCCACCC	-161305743	True	NA	NA	False	NA	NA	NA	161306190	161305694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161305978_161306107
transcript_124321.nnic	chr6	-	735	3	NNC	ENSG00000203809.7	novel	879	4	NA	NA	52	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTGTATCTATTGAGC	-104940426	False	NA	NA	False	AATAAA	-20	NA	104940475	104936119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_104936683_104940177_104940214_104940339
transcript_124324.known	chr6	-	1797	3	FSM	ENSG00000203809.7	ENST00000636682.1	1797	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTTATAATTATATAATAT	-104941214	False	NA	NA	False	AATATA	-18	NA	104941263	104935205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_104936683_104940177_104940214_104940979
transcript_124326.known	chr6	-	760	2	FSM	ENSG00000203809.7	ENST00000659952.1	760	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATATTGTATCTATTGAGC	-104940325	False	NA	NA	False	AATAAA	-20	NA	104940374	104936119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_104936683_104940177
transcript_124327.known	chr6	-	1879	4	FSM	ENSG00000132429.10	ENST00000254765.4	1879	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	8.52447456836295	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTTCCTGGAAAACAAAG	-105179733	True	NA	NA	False	AATAAA	-18	NA	105180014	105157899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_105158752_105159710_105159820_105161424_105162161_105179832
transcript_124328.known	chr6	-	1029	4	FSM	ENSG00000132429.10	ENST00000474760.1	1029	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	3.39934634239519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCGAGATGCCATTGC	-105179714	True	NA	-80	True	TATAAA	-8	NA	105179995	105158359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_105158752_105159710_105159820_105161795_105162161_105179832
transcript_124331.known	chr6	+	1543	4	FSM	ENSG00000203808.13	ENST00000663357.1	1543	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTATTTTCTTTCTTC	105137227	True	NA	NA	False	AATAAA	-35	NA	105137249	105169952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_105137312_105137769_105137924_105147275_105147381_105168730
transcript_124332.known	chr6	-	7250	15	FSM	ENSG00000085377.15	ENST00000652536.2	7250	15	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_7	33.0728941359932	424	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCCTTTCTGGATGAGTG	-105396897	True	NA	NA	False	AATAAA	-16	NA	105403082	105273217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_105278439_105281745_105281903_105282450_105282583_105285485_105285581_105288757_105288895_105323664_105323769_105328828_105329027_105333313_105333506_105352971_105353078_105368902_105369025_105373368_105373579_105376124_105376256_105377385_105377520_105397852_105397928_105402846
transcript_124333.known	chr6	+	580	2	FSM	ENSG00000057657.17	ENST00000481163.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCCTATTAACTATTAGGA	106098901	True	NA	NA	False	AAAACA	-9	NA	106098924	106099709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_106099095_106099299
transcript_124335.known	chr6	-	3092	8	FSM	ENSG00000057663.16	ENST00000343245.7	3092	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	132.717438068051	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319368	False	53	NA	False	AATAAA	-1	NA	106325417	106184475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325275
transcript_124338.known	chr6	-	3185	8	FSM	ENSG00000057663.16	ENST00000369076.8	3185	8	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_5	50.2008211982592	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTGTCCGTCTTTATTT	-106319711	True	NA	NA	False	AATAAA	-1	NA	106325760	106184475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_124339.known	chr6	-	1888	9	FSM	ENSG00000057663.16	ENST00000646025.1	1888	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	167.63944755039	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAATATGTTTTGTCATT	-106319742	True	NA	-31	True	AATAAA	-4	NA	106325791	106185941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106186677_106201971_106202090_106217463_106217602_106248149_106248245_106279660_106279824_106293027_106293107_106308363_106308492_106316100_106316267_106325525
transcript_124340.nic	chr6	+	973	2	ISM	ENSG00000112297.18	ENST00000633556.3	10039	22	-42	119758	-42	-60780	5prime_fragment	FALSE	canonical	3	30	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAAATTAGCT	106359651	True	NA	NA	False	ACTAAA	-13	NA	106360674	106452259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_106361082_106451693
transcript_124341.known	chr6	-	2893	9	FSM	ENSG00000130347.13	ENST00000369063.8	2893	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	11.2998893799895	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAAAAAATCTGAT	-106627024	True	NA	NA	False	NA	NA	NA	106629498	106570770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106628747
transcript_124342.nnic	chr6	-	1183	9	NNC	ENSG00000130347.13	novel	2893	9	NA	NA	-589	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_8	58.8021045541739	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGACGTTCTTATTTGGT	NA	False	NA	-21	True	AATAAA	-17	NA	106630087	106571974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_106572104_106583327_106583421_106587678_106587863_106592163_106592301_106602873_106602923_106619201_106619327_106621424_106621494_106622817_106622970_106629842
transcript_124351.known	chr6	-	814	6	FSM	ENSG00000130347.13	ENST00000539449.2	814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.7710541700496	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTTAAATAAAAATGCAGT	-106628983	False	NA	-49	True	NA	NA	NA	106629021	106572002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106572104_106583327_106583421_106619201_106619327_106621424_106621494_106622817_106622970_106628747
transcript_124356.known	chr6	+	2158	7	FSM	ENSG00000130348.11	ENST00000369044.1	2158	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	10.7030629053349	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	106627230	True	NA	NA	False	NA	NA	NA	106629613	106653823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_106629706_106640348_106640509_106640822_106640922_106642993_106643091_106649024_106649202_106652208_106652385_106652466
transcript_124359.known	chr6	-	802	3	FSM	ENSG00000272398.6	ENST00000610952.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	1361.5	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGATGGATGCCAATATT	-106975094	True	NA	NA	False	NA	NA	NA	106975627	106971468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106974577_106974755_106975368
transcript_124361.known	chr6	-	825	2	FSM	ENSG00000272398.6	ENST00000622315.1	825	2	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTGGCTTGAGAAAT	-106973978	False	NA	-94	True	NA	NA	NA	106974039	106971379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106973669
transcript_124362.known	chr6	-	1026	2	FSM	ENSG00000272398.6	ENST00000615659.1	1026	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAGAATCTACCCCCAGAT	-106975266	False	533	NA	False	NA	NA	NA	106975327	106971002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106975133
transcript_124365.known	chr6	-	566	2	FSM	ENSG00000272398.6	ENST00000619869.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGACACTTAATACTACCT	-106975398	False	533	-74	True	NA	NA	NA	106975459	106971359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106975368
transcript_124366.known	chr6	-	2156	2	FSM	ENSG00000272398.6	ENST00000606017.2	2156	2	0	0	0	0	multi-exon	FALSE	canonical	3	2828	junction_1	0	17426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCATTTTAAGTTTTTC	-106942294	True	NA	-11	True	AATAAA	-22	NA	106974729	106969830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971835_106974577
transcript_124367.known	chr6	-	586	2	FSM	ENSG00000272398.6	ENST00000620405.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTGAACTCACTTTCCT	-106942297	True	NA	NA	False	NA	NA	NA	106974732	106971093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_106971525_106974577
transcript_12437.known	chr1	+	369	4	FSM	ENSG00000143252.16	ENST00000392169.6	369	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	402.54551157464	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAGGAGGCTCCCAGCAT	161306958	True	NA	NA	False	GGGGCT	-14	NA	161314387	161362433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161340593_161340656_161356676_161356841_161362328
transcript_124379.known	chr6	+	1146	5	FSM	ENSG00000130349.10	ENST00000625458.1	1146	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	95.5458005356593	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGAATCTGCCGAGCCAT	107028543	False	NA	15	True	AATAAA	-15	NA	107028568	107051335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_107028798_107030024_107030108_107039748_107040231_107044259_107044333_107051056
transcript_124391.known	chr6	+	1158	4	FSM	ENSG00000130349.10	ENST00000311381.8	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	37.8623236946117	1889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTATTTAAAATGTT	107026298	True	NA	22	True	AATAAA	-18	NA	107028198	107051586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_107028272_107039748_107040231_107044259_107044333_107051056
transcript_124397.known	chr6	+	1420	4	FSM	ENSG00000130349.10	ENST00000405204.6	1420	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	85.2655981168385	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAATCTGCCGAGCCATT	107026312	True	NA	16	True	AATAAA	-16	NA	107028212	107051336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_107028798_107039748_107040231_107044259_107044333_107051056
transcript_12442.known	chr1	+	1308	6	FSM	ENSG00000143252.16	ENST00000367975.7	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	97.4379802746342	10538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTAGAGAAACCAAGAAAAT	161306951	True	NA	12	True	ATTAAA	-31	NA	161314380	161363206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161356676_161356841_161362328
transcript_124424.known	chr6	-	3536	8	FSM	ENSG00000164494.12	ENST00000369037.9	3536	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	14.2112344176524	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCCAGGTTTGTTTTA	-107458565	True	NA	-5	True	ATTAAA	-17	NA	107459564	107152561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107154778_107193821_107193855_107210438_107210571_107212108_107212283_107245547_107245620_107274028_107274228_107334197_107334333_107458989
transcript_12443.known	chr1	+	1127	5	FSM	ENSG00000143252.16	ENST00000342751.8	1127	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	321.826331272008	8147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTCTCCTTGAAATCT	161306951	True	NA	-5	True	ATTAAA	-14	NA	161314380	161363189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161340593_161340656_161362328
transcript_124430.nnic	chr6	-	1004	5	NNC	ENSG00000164494.12	novel	1236	4	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.0228991875736	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-107458592	True	NA	-4	True	AATAAA	-15	NA	107459591	107264185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_107264513_107274028_107274228_107324555_107324675_107334197_107334333_107459367
transcript_124435.known	chr6	-	1236	4	FSM	ENSG00000164494.12	ENST00000369031.4	1236	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	25.4950975679639	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-107458565	True	NA	-4	True	AATAAA	-15	NA	107459564	107264185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107264513_107274028_107274228_107334197_107334333_107458989
transcript_124436.nnic	chr6	-	885	4	NNC	ENSG00000164494.12	novel	1236	4	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	36.7090663944965	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGTCTTATCTGT	-107458592	True	NA	-4	True	AATAAA	-15	NA	107459591	107264185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_107264513_107274028_107274228_107334197_107334333_107459367
transcript_12444.known	chr1	+	571	7	FSM	ENSG00000143252.16	ENST00000504963.5	571	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	391.603115411509	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTCCTACACATTATT	161306961	True	NA	NA	False	AAGAAA	-15	NA	161314390	161362452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161328395_161328498_161339561_161339589_161340593_161340656_161356676_161356841_161362328
transcript_124445.known	chr6	-	482	3	FSM	ENSG00000025796.14	ENST00000460009.1	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGTTATTGGTGCA	-107957920	False	NA	NA	False	AATAAA	-28	NA	107958042	107954583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107954767_107955964_107956107_107957885
transcript_124446.known	chr6	-	6430	21	FSM	ENSG00000025796.14	ENST00000369002.9	6430	21	0	0	0	0	multi-exon	TRUE	canonical	3	364	junction_6	45.3204975700841	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTCTGATTTGG	-107945397	True	NA	2	True	AATAAA	-19	NA	107958208	107867755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_107871848_107872807_107872913_107876563_107876663_107881148_107881251_107882987_107883147_107893481_107893656_107893837_107893898_107897648_107897732_107901369_107901518_107902843_107902999_107904628_107904722_107906447_107906581_107906682_107906778_107908926_107909036_107911345_107911397_107912715_107912775_107913365_107913428_107921796_107921910_107924817_107924933_107929414_107929515_107957885
transcript_124447.known	chr6	-	4471	6	FSM	ENSG00000081087.15	ENST00000193322.8	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	18.8297636735037	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGATCCATGCTTCT	-108070280	True	NA	50	True	ATTAAA	-20	NA	108074741	108041408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108044841_108049252_108049419_108051030_108051199_108054489_108054588_108064184_108064300_108074249
transcript_12445.known	chr1	+	460	5	FSM	ENSG00000143252.16	ENST00000432287.6	460	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	347.199510368318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACACATTATTACATTCACC	161306952	True	NA	NA	False	AAGAAA	-24	NA	161314381	161362461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161314426_161323613_161323671_161340593_161340656_161356676_161356841_161362328
transcript_124453.known	chr6	-	1535	4	FSM	ENSG00000112335.15	ENST00000230085.13	1535	4	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_1	47.7516724547133	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCATTTCTCCTATTTTTC	-108254386	True	NA	NA	False	ATTAAA	-20	NA	108261040	108211221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260759
transcript_124454.known	chr6	-	890	4	FSM	ENSG00000112335.15	ENST00000349379.5	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	405.267264352249	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCAGTTGACAAGAAGTTA	-108261089	False	NA	NA	False	NA	NA	NA	108261244	108212004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108212255_108214497_108214623_108222949_108223046_108260825
transcript_124455.known	chr6	-	1072	3	FSM	ENSG00000112335.15	ENST00000426155.6	1072	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	435.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTGTGTTGCCTCCAGC	-108260809	False	NA	-4	True	AATAAA	-26	NA	108260964	108211512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108212255_108214497_108214623_108260759
transcript_124457.known	chr6	+	5048	13	FSM	ENSG00000135537.17	ENST00000368977.9	5048	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.0063623674308	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTTGCTGGTAGGAAAG	108294658	True	NA	NA	False	NA	NA	NA	108295053	108526001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108510211_108510353_108519696_108519811_108522296
transcript_12446.known	chr1	+	1871	1	FSM	ENSG00000288093.1	ENST00000667751.1	1871	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTCTTCAATGTGGA	161399984	True	NA	NA	False	AATAAA	-22	NA	161399997	161401868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161400000_161401900
transcript_124460.nic	chr6	+	1580	12	NIC	ENSG00000135537.17	novel	5048	13	NA	NA	-145	1	combination_of_known_junctions	FALSE	canonical	2	3	junction_10	9.15522702166264	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAGGCAGAACTCCTTATT	NA	False	NA	11	True	AATAAA	-20	NA	108294845	108522466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_108295219_108323824_108324049_108346987_108347040_108355653_108355756_108356689_108356821_108366232_108366333_108401995_108402055_108447213_108447297_108476864_108476936_108477191_108477293_108519696_108519811_108522296
transcript_12447.known	chr1	+	805	3	FSM	ENSG00000143226.15	ENST00000461298.1	805	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGCCTCAGATTTTTCCT	NA	False	NA	34	True	ACTAAA	-10	NA	161513376	161518590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161513528_161513894_161513933_161517974
transcript_124471.known	chr6	+	742	6	FSM	ENSG00000135537.17	ENST00000437715.1	742	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7936696179197	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCAATAGCTCCCATAGC	108295734	False	NA	NA	False	AAAAAG	-29	NA	108295752	108356751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_108295880_108319616_108319792_108323824_108324049_108346987_108347040_108355653_108355756_108356689
transcript_124478.nic	chr6	+	1079	7	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-37	74657	-31	19563	5prime_fragment	FALSE	canonical	2	2	junction_4	10.9455724179028	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTTTGTTTTTTTTTTA	108847666	True	NA	NA	False	AAAACA	-20	NA	108848384	108899819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108894466_108894544_108899693
transcript_124479.nic	chr6	+	1433	7	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-37	74303	-31	19917	5prime_fragment	FALSE	canonical	2	2	junction_4	10.9455724179028	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCGTCCTTGACAGGTGT	108847666	True	NA	NA	False	ATTAAA	-35	NA	108848384	108900173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823_108868996_108876142_108876351_108894466_108894544_108899693
transcript_124484.nnic	chr6	+	1261	4	NNC	ENSG00000118690.13	novel	3734	18	NA	NA	-31	-13989	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.589211407093	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAAAAACAAACAAAACC	108847666	True	NA	NA	False	AATAGA	-31	NA	108848384	108862358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_108848547_108854224_108854486_108858198_108858272_108861593
transcript_124485.nic	chr6	+	1191	4	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-37	104958	-31	-6829	5prime_fragment	FALSE	canonical	3	22	junction_3	3.68178700572909	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAATATTAGGATAAGT	108847666	True	NA	-69	True	AAAAAG	-5	NA	108848384	108869518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823
transcript_124486.nic	chr6	+	1273	4	ISM	ENSG00000118690.13	ENST00000392644.9	3734	18	-37	104876	-31	-6747	5prime_fragment	FALSE	canonical	3	22	junction_3	3.68178700572909	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTAATTTTATTAGAAA	108847666	True	NA	13	True	AATAAA	-26	NA	108848384	108869600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108858198_108858272_108868823
transcript_124487.nic	chr6	+	1200	3	ISM	ENSG00000118690.13	ENST00000368972.7	3663	17	-31	104872	-31	-6747	5prime_fragment	FALSE	canonical	2	3	junction_2	14	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGTTAATTTTATTAGAAA	108847666	True	NA	13	True	AATAAA	-26	NA	108848384	108869600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_108848547_108854224_108854486_108868823
transcript_124488.known	chr6	-	2676	10	FSM	ENSG00000080546.14	ENST00000356644.7	2676	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_9	10.0492613818622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTGCTGTCTCAATC	-109005927	True	NA	-5	True	AATAAA	-18	NA	109009555	108986441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109009358
transcript_124489.known	chr6	-	3509	10	FSM	ENSG00000080546.14	ENST00000436639.7	5664	10	27	2128	27	5	multi-exon	FALSE	canonical	3	16	junction_9	50.3641063643201	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTCTCAATCTCTTA	-109094650	True	NA	0	True	AATAAA	-23	NA	109094819	108986436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_108987631_108988542_108988688_108990644_108990836_108992786_108992900_108994461_108994610_108998512_108998756_109000490_109000674_109001287_109001489_109002277_109002344_109093794
transcript_12449.known	chr1	-	372	1	FSM	ENSG00000213075.7	ENST00000454082.1	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTGATCGTCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	161685209	161684837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_161684800_161685200
transcript_124502.nic	chr6	+	1893	11	NIC	ENSG00000183137.15	novel	1649	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	21.5965274986513	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	109095113	True	NA	13	True	AATAAA	-18	NA	109095150	109160765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_109095576_109140420_109140676_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_124509.known	chr6	+	1680	11	FSM	ENSG00000183137.15	ENST00000368970.6	1680	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	26.8717323594888	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTATTGATTGAAGCCC	109094421	True	NA	NA	False	AATAAA	-18	NA	109095528	109163166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159217_109159463_109160571_109160717_109162748
transcript_124510.known	chr6	+	1649	11	FSM	ENSG00000183137.15	ENST00000368968.6	1649	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.3649410743016	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTTATTGATTGAAG	109094412	True	NA	NA	False	AATAAA	-15	NA	109095519	109163163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571_109160731_109162748
transcript_124520.nic	chr6	+	1630	10	ISM	ENSG00000183137.15	ENST00000368968.6	1649	11	-361	2398	1	0	5prime_fragment	FALSE	canonical	3	22	junction_1	19.1472526475893	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	109095121	True	NA	13	True	AATAAA	-18	NA	109095158	109160765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_124529.nic	chr6	+	1131	9	NIC	ENSG00000183137.15	novel	1649	11	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	20.8772453882211	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTGTTGTATCTCTGTA	109094387	True	NA	13	True	AATAAA	-18	NA	109095494	109160765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790_109155878_109159024_109159103_109159268_109159463_109160571
transcript_124536.known	chr6	+	3832	8	FSM	ENSG00000183137.15	ENST00000521277.5	3832	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	32.5218921557119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGGATATTTCG	109095072	True	NA	NA	False	NA	NA	NA	109095109	109158488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109106034_109106091_109145218_109145382_109146757_109146938_109150165_109150240_109153832_109153950_109155229_109155308_109155790
transcript_124538.known	chr6	+	908	7	FSM	ENSG00000183137.15	ENST00000519095.5	908	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	21.5309854241122	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGATATAAAATAAAAGACA	109094404	True	NA	NA	False	AAAAAG	-7	NA	109095511	109155974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109145218_109145382_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_124541.nic	chr6	+	1585	6	ISM	ENSG00000183137.15	ENST00000520761.1	865	8	-56	2649	-1	4	5prime_fragment	FALSE	canonical	2	20	junction_1	24.3688325530789	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCTGTATTTTTCATA	109094387	True	NA	NA	False	AATAAA	-16	NA	109095494	109156797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_109095576_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_124546.known	chr6	+	866	7	FSM	ENSG00000183137.15	ENST00000523209.5	866	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33.1293760212225	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAAAGAAGAAATCTTCA	109094418	True	NA	NA	False	AGTAAA	-38	NA	109095525	109155854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109095576_109140420_109140676_109146757_109146938_109150117_109150240_109153832_109153950_109155229_109155308_109155790
transcript_124549.known	chr6	-	3020	6	FSM	ENSG00000135535.17	ENST00000310786.10	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_3	47.964153281383	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109373317	True	NA	0	True	AATAAA	-22	NA	109382467	109366513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_124550.known	chr6	-	2992	6	FSM	ENSG00000135535.17	ENST00000504373.2	2992	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	303.010626876352	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTGTTACTGCGTTTTG	-109381728	False	50	0	True	AATAAA	-22	NA	109381739	109366513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109370410_109370468_109376073_109376113_109377899_109377972_109379578_109379663_109381503
transcript_124555.known	chr6	-	2954	5	FSM	ENSG00000135535.17	ENST00000275080.11	2954	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	339.586881372058	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109373294	True	NA	-4	True	AATAAA	-18	NA	109382444	109366517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109370410_109370468_109377899_109377972_109379578_109379663_109382203
transcript_124556.known	chr6	-	2936	5	FSM	ENSG00000135535.17	ENST00000324953.9	2936	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	291.649189952587	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATAGTGTGTTACTGCGT	-109373294	True	NA	-4	True	AATAAA	-18	NA	109382444	109366517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109369018_109376073_109376113_109377899_109377972_109379578_109379663_109382203
transcript_124562.known	chr6	+	872	1	FSM	ENSG00000260273.1	ENST00000563105.1	872	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGGGATCTTTTCAGTGT	109382784	False	NA	NA	False	AATAGA	-15	NA	109382794	109383666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109382800_109383700
transcript_124563.known	chr6	+	1684	10	FSM	ENSG00000135587.9	ENST00000258052.8	1684	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	9.79543859579297	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440667	True	NA	5	True	AATAAA	-14	NA	109440723	109443919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442626_109442751_109442885_109442976_109443082_109443266_109443421_109443516
transcript_124564.nic	chr6	+	1714	9	NIC	ENSG00000135587.9	novel	1684	10	NA	NA	96	0	intron_retention	FALSE	canonical	3	75	junction_5	9.01387818865997	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTCTGCCTTTTTCCTT	109440426	False	NA	5	True	AATAAA	-14	NA	109440819	109443919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_109441172_109441356_109441454_109441551_109441629_109441973_109442068_109442209_109442300_109442542_109442885_109442976_109443082_109443266_109443421_109443516
transcript_124565.known	chr6	-	3430	25	FSM	ENSG00000135596.18	ENST00000358807.8	3430	25	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_24	53.9912544358395	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCGTTCACACCGCCTACA	-109453591	True	NA	-1	True	ATTAAA	-17	NA	109455772	109444061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109444340_109444724_109444799_109444895_109444996_109445196_109445291_109445415_109445530_109445770_109445863_109446135_109446413_109446695_109446773_109447072_109447230_109447356_109447441_109447680_109447723_109447874_109447964_109448202_109448394_109448731_109448880_109449399_109449482_109449656_109449784_109449969_109450086_109450299_109450558_109451599_109451701_109452245_109452402_109452510_109452616_109453262_109453368_109453637_109453846_109453938_109454240_109455718
transcript_124573.known	chr6	-	5501	7	FSM	ENSG00000112365.5	ENST00000230122.4	5501	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	15.4020200695306	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTCATTATAAATGCTT	-109479910	True	NA	NA	False	ATTAAA	-22	NA	109483219	109462593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_109466575_109467652_109467735_109475398_109475483_109476174_109476259_109476762_109476931_109481074_109482055_109483097
transcript_124575.nic	chr6	-	1209	2	ISM	ENSG00000112365.5	ENST00000230122.4	5501	7	19	18355	19	-18355	5prime_fragment	FALSE	canonical	3	132	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTAATTTTCTCCAC	-109479891	True	NA	-8	True	AATAAA	-17	NA	109483200	109480948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_109482055_109483097
transcript_124580.nic	chr6	-	882	8	ISM	ENSG00000155085.16	ENST00000285397.9	2566	12	-11	25033	-11	-12056	5prime_fragment	FALSE	canonical	3	12	junction_7	10.4939243841183	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGATATTTGTGTTTCAT	NA	False	NA	NA	False	AATATA	-15	NA	109691228	109656725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_109656885_109659227_109659414_109662550_109662664_109671918_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_124584.nic	chr6	-	679	5	ISM	ENSG00000155085.16	ENST00000285397.9	2566	12	-11	39971	-11	-26994	5prime_fragment	FALSE	canonical	3	12	junction_4	12.3161479367536	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGGTCCATCTTGCAG	NA	False	NA	NA	False	AGTAAA	-14	NA	109691228	109671663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_109672016_109672114_109672168_109674197_109674262_109675628_109675757_109691146
transcript_124586.known	chr6	+	3003	23	FSM	ENSG00000112367.12	ENST00000674884.1	3003	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	52.9571009917891	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAATAAAGATGACTAGATA	109688484	True	NA	-10	True	NA	NA	NA	109691314	109825405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735131_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_124588.known	chr6	+	2915	22	FSM	ENSG00000112367.12	ENST00000676442.1	2915	22	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	54.3957948221282	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACTAGATAATTTGCTGT	109688434	True	NA	-1	True	AATAAA	-2	NA	109691264	109825414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_12459.known	chr1	+	3032	16	FSM	ENSG00000118217.7	ENST00000681557.1	3032	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	28.9344085821708	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCGTCTCAAAAAAAAA	161764406	True	NA	NA	False	NA	NA	NA	161766341	161959658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161766443_161778243_161778317_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851721_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_124590.known	chr6	+	2865	22	FSM	ENSG00000112367.12	ENST00000674657.1	2865	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	53.5915517760841	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGATGACTAGATAA	109688448	True	NA	-9	True	NA	NA	NA	109691278	109825406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_124591.known	chr6	+	2811	22	FSM	ENSG00000112367.12	ENST00000674649.1	2811	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	53.8377507085924	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCGTCTGAAGCCTTTCT	109688481	True	NA	-4	True	ATTAAA	-6	NA	109691311	109825352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_124592.known	chr6	+	2781	21	FSM	ENSG00000112367.12	ENST00000674569.1	2781	21	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	50.1253428915953	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGACTAGATAATTTGCT	109688465	True	NA	-3	True	NA	NA	NA	109691295	109825412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_124595.known	chr6	+	2501	20	FSM	ENSG00000112367.12	ENST00000675831.1	2501	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	57.6660555371948	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTGTCTCATCTTCAAA	109688482	True	NA	-44	True	NA	NA	NA	109691312	109825312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_124597.known	chr6	+	1387	9	FSM	ENSG00000112367.12	ENST00000676435.1	1387	9	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_7	26.9351072023113	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688465	True	NA	34	True	AATAAA	-20	NA	109691295	109743480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109
transcript_1246.nnic	chr1	+	404	3	NIC	ENSG00000235169.11	novel	506	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	25	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAGAGCACAGGCCTG	3772003	True	NA	26	True	AATAAA	-35	NA	3772731	3775956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_3772789_3775298_3775484_3775794
transcript_124606.nic	chr6	+	922	7	ISM	ENSG00000112367.12	ENST00000454215.6	1129	9	-48	4834	-1	-61	5prime_fragment	FALSE	canonical	3	238	junction_6	15.9338912036228	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTTTTGTATATTATTC	109688417	True	NA	4	True	ATTAAA	-18	NA	109691247	109738412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324
transcript_124607.known	chr6	+	1158	7	FSM	ENSG00000112367.12	ENST00000368941.2	1158	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	88.5525581536499	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATGTAAGAATCATTCAA	109688464	True	NA	34	True	AATAAA	-20	NA	109691294	109743480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109743109
transcript_124614.known	chr6	+	2262	17	FSM	ENSG00000112367.12	ENST00000674930.1	2262	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	92.03427944929	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTGCTGTTGTTGCCTTT	109688465	True	NA	9	True	AATAAA	-12	NA	109691295	109825424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715077_109715177_109732636_109732688_109735149_109735299_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109825087
transcript_124615.known	chr6	+	3033	23	FSM	ENSG00000112367.12	ENST00000675523.1	3033	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.1150513290343	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTGTTGCCTTTGC	109688455	True	NA	11	True	AATAAA	-14	NA	109691285	109825426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_109691502_109715079_109715177_109716444_109716569_109727108_109727266_109732636_109732688_109735149_109735299_109738324_109738454_109741443_109741545_109743109_109743273_109743674_109743773_109760249_109760384_109762090_109762208_109763936_109763983_109765012_109765162_109766728_109766896_109776921_109777061_109784969_109785029_109786301_109786450_109789593_109789678_109791375_109791572_109792581_109792665_109796764_109796852_109825087
transcript_124618.known	chr6	-	2815	11	FSM	ENSG00000112290.13	ENST00000392586.5	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	128.817700647077	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	NA	False	NA	-1	True	AATAAA	-19	NA	110180001	110099818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110160634_110160733_110178597_110178743_110179840
transcript_124619.known	chr6	-	2675	9	FSM	ENSG00000112290.13	ENST00000392587.6	2675	9	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_8	37.8877866204929	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTGTTGCTCTTTGAA	-110175863	True	NA	-1	True	AATAAA	-19	NA	110179702	110099818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110100680_110101587_110102217_110103377_110103558_110105406_110105580_110107076_110107195_110108527_110108682_110113325_110113461_110127468_110127630_110179438
transcript_124625.known	chr6	+	3933	16	FSM	ENSG00000168438.15	ENST00000368932.5	3933	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.6751251485809	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATCAAAATGTTCATCTTG	110180109	True	NA	20	True	AATAAA	-20	NA	110180140	110232223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110180181_110180383_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_124630.known	chr6	+	3859	15	FSM	ENSG00000168438.15	ENST00000307731.2	3859	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	13.7625638332872	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCTTGTTCATCTTT	110177250	True	NA	29	True	AATAAA	-29	NA	110180426	110232232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110180634_110193181_110193269_110201557_110201688_110207505_110207590_110209083_110209224_110210706_110210804_110212132_110212273_110213085_110213161_110215285_110215332_110217701_110217804_110219363_110219480_110219735_110219870_110226166_110226244_110228831_110228977_110229953
transcript_124632.known	chr6	-	1117	2	FSM	ENSG00000155111.15	ENST00000497709.1	1117	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	NA	False	NA	NA	False	AATAAA	-19	NA	110815958	110813158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110814125_110815807
transcript_124633.known	chr6	-	1083	2	FSM	ENSG00000155111.15	ENST00000468997.5	1083	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTTTTGAGTGAAATT	-110815059	False	NA	NA	False	AATAAA	-19	NA	110815125	110813158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_110814125_110815008
transcript_124635.known	chr6	+	311	2	FSM	ENSG00000271607.1	ENST00000605131.1	311	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACAGTGGTGAAGCATCTA	NA	False	NA	NA	False	NA	NA	NA	110863859	110864451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110863966_110864246
transcript_124638.known	chr6	+	1605	8	FSM	ENSG00000123505.19	ENST00000368877.9	1605	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	218.033886151222	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTCGTCCTCATTAGGT	110856426	True	NA	NA	False	NA	NA	NA	110874784	110893982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110875216_110888856_110888984_110890253_110890357_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_12464.known	chr1	+	3111	16	FSM	ENSG00000118217.7	ENST00000680688.1	3111	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	29.8763377199341	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCCAGCCTGGGCGACA	161764362	True	NA	NA	False	NA	NA	NA	161766297	161959632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161766443_161778243_161778321_161781911_161782000_161783989_161784097_161791407_161791538_161792123_161792328_161802051_161802273_161819632_161819819_161821069_161821162_161846448_161846581_161851664_161851836_161853223_161853324_161860206_161860278_161863197_161863313_161912295_161912381_161958445
transcript_124641.known	chr6	+	3121	6	FSM	ENSG00000123505.19	ENST00000451850.6	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	258.13562326808	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTTGCCCTGTTTT	110874759	False	NA	30	True	AATAAA	-29	NA	110874769	110895713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110875216_110892160_110892204_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_124643.known	chr6	+	3059	5	FSM	ENSG00000123505.19	ENST00000675380.1	3059	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	289.483483984838	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAACTTTTCTGTTGCCCT	110856425	True	NA	25	True	AATAAA	-24	NA	110874783	110895708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110875216_110892298_110892444_110892734_110892828_110892909_110893066_110893475
transcript_124648.known	chr6	+	800	6	FSM	ENSG00000155115.7	ENST00000480191.1	800	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	826.656978437852	2361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGCATTTTATTGGC	110958895	False	NA	32	True	CATAAA	-34	NA	110958927	110967890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110959043_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_12465.known	chr1	+	611	5	FSM	ENSG00000118217.7	ENST00000680633.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	44.4992977472679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCAACCAATTATCAGTTTA	161764386	True	NA	NA	False	NA	NA	NA	161766321	161792288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_161766443_161781911_161782000_161783989_161784097_161791407_161791538_161792123
transcript_124650.known	chr6	+	788	6	FSM	ENSG00000155115.7	ENST00000329970.8	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	1705	junction_1	163.149501991272	19858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTCAGTCTTTTAATATT	110935481	True	NA	14	True	CATAAA	-16	NA	110958705	110967872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110958827_110959171_110959253_110960413_110960478_110960571_110960617_110962391_110962506_110967509
transcript_124655.known	chr6	+	3671	10	FSM	ENSG00000197498.13	ENST00000441448.7	3671	10	0	0	0	0	multi-exon	FALSE	canonical	3	884	junction_7	58.2713956890991	2885	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTCATTTATCTGATTAG	110970730	True	NA	17	True	AATAAA	-17	NA	110982037	111028263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_110982130_110985005_110985139_110989027_110989066_110991746_110991787_110997182_110997265_110999710_110999788_111008037_111008138_111015753_111015857_111024182_111024328_111025402
transcript_124657.known	chr6	+	912	3	FSM	ENSG00000112394.18	ENST00000419619.2	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	40.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTGTGAACTTGGAT	NA	False	NA	21	True	GATAAA	-23	NA	111172694	111178714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111172840_111177211_111177666_111178401
transcript_124658.known	chr6	+	14805	4	FSM	ENSG00000173214.7	ENST00000671876.2	14805	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	5.55777733351102	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTTGGTTTAAGATTC	111257382	True	NA	5	True	AATAAA	-16	NA	111259338	111280005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111259728_111262256_111262426_111263829_111263947_111265875
transcript_124676.nnic	chr6	+	668	5	NNC	ENSG00000231889.8	novel	609	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.8405728739343	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111483477	False	NA	NA	False	ATTAAA	-16	NA	111483489	111503608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483666_111484117_111484146_111484743_111484862_111486299_111486333_111503295
transcript_12469.known	chr1	+	8524	8	FSM	ENSG00000152332.16	ENST00000489294.2	8524	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.97700777617927	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTCTATACTTAGTATA	162494597	True	NA	35	True	AATAAA	-36	NA	162497817	162529631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162498269_162499954_162500248_162500912_162501105_162503753_162503849_162512499_162512577_162512724_162512824_162518101_162518191_162522403
transcript_1247.known	chr1	-	4303	7	FSM	ENSG00000130764.10	ENST00000378251.3	4303	7	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_1	7.38052994182818	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGCAGATCCTTTCCCA	-3788814	True	NA	71	True	AATAAA	-17	NA	3796498	3778558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3781337_3781511_3781602_3782660_3782764_3783995_3784112_3785086_3785204_3786848_3787311_3795861
transcript_124700.known	chr6	+	609	4	FSM	ENSG00000231889.8	ENST00000525151.5	609	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.4222150491349	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111482462	True	NA	NA	False	ATTAAA	-16	NA	111483515	111503608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111484117_111484146_111484743_111484862_111503295
transcript_124708.known	chr6	+	784	4	FSM	ENSG00000231889.8	ENST00000438298.7	1093	4	25	284	7	-12	multi-exon	FALSE	canonical	1	8	junction_2	23.3666428910958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTATTTCTTAAAAAAA	111482508	False	NA	NA	False	ACTAAA	-14	NA	111483561	111576741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111484743_111484862_111574620_111574803_111576361
transcript_124729.nnic	chr6	+	696	3	NNC	ENSG00000231889.8	novel	609	4	NA	NA	-105	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	0.5	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111483360	True	NA	NA	False	ATTAAA	-16	NA	111483390	111503608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483666_111490967_111491076_111503295
transcript_124733.known	chr6	+	484	3	FSM	ENSG00000231889.8	ENST00000456352.2	484	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAAAATTCTGAAGCA	111483573	False	NA	NA	False	ACTAAA	-26	NA	111483611	111576753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111574620_111574659_111576361
transcript_124734.known	chr6	+	1106	3	FSM	ENSG00000231889.8	ENST00000449449.7	2171	3	45	1020	4	135	multi-exon	FALSE	canonical	3	18	junction_1	11.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTCTCCAAGAAAAACTC	111482487	True	NA	NA	False	NA	NA	NA	111483540	111577160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111574620_111574803_111576361
transcript_124744.nnic	chr6	+	492	3	NNC	ENSG00000231889.8	novel	915	3	NA	NA	71	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	25	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTCGTGTTACACTTGTC	111483697	False	NA	NA	False	ATTAAA	-16	NA	111483735	111503608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_111483797_111484743_111484862_111503295
transcript_124746.known	chr6	+	324	2	FSM	ENSG00000231889.8	ENST00000420651.3	442	2	21	97	3	-97	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTTATTTGCATA	111482504	False	NA	41	True	NA	NA	NA	111483557	111503511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111503295
transcript_124748.known	chr6	+	576	2	FSM	ENSG00000231889.8	ENST00000532353.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTTTGACCTAGTAATT	111482501	False	NA	NA	False	TTTAAA	-7	NA	111483554	111598302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_111483666_111597837
transcript_124749.known	chr6	-	2785	10	FSM	ENSG00000056972.20	ENST00000340026.10	2785	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	35.5996254661946	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-111606264	False	NA	-7	True	AATAAA	-19	NA	111606278	111558939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566561_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111601195_111601307_111605775
transcript_124750.known	chr6	-	2264	9	FSM	ENSG00000056972.20	ENST00000359831.8	2264	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.8896066951421	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTTTTACTTATCTC	-111604393	True	NA	-7	True	AATAAA	-19	NA	111605871	111558939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111559552_111562964_111563040_111566443_111566558_111567623_111567693_111572894_111572984_111575642_111575822_111580196_111580390_111591257_111592095_111605775
transcript_124752.known	chr6	-	1115	4	FSM	ENSG00000227012.3	ENST00000653948.1	1115	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGGCATTCAGCAATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	111909395	111900305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_111901142_111901742_111901851_111908925_111909034_111909332
transcript_124755.nnic	chr6	+	1448	2	Antisense	novelGene_ENSG00000227012.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTACTTTTTTTAGACA	111908454	True	NA	NA	False	AATAAA	-17	NA	111908509	111947052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_111908764_111945858
transcript_12476.known	chr1	+	2377	11	FSM	ENSG00000117143.13	ENST00000271469.7	2377	11	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	46.2156899764571	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGTACTTGAAGAAATTA	162558201	True	NA	25	True	AATAAA	-26	NA	162561505	162599842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162592731_162592783_162597791_162597859_162599270
transcript_124762.known	chr6	-	2225	12	FSM	ENSG00000074935.14	ENST00000368662.10	2225	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	19.807336482031	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTTCTAGCCTTAAC	-112085613	True	NA	2	True	AATAAA	-28	NA	112087482	112070662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_12477.nnic	chr1	+	2211	11	NNC	ENSG00000117143.13	novel	2377	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	106.227162251469	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTCATTTGTACT	162561153	True	NA	14	True	AATAAA	-15	NA	162561721	162599831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_162561778_162562472_162562585_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
transcript_124780.nic	chr6	-	2119	11	NIC	ENSG00000074935.14	novel	2225	12	NA	NA	-19	-114	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	31.758620876858	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTACTTGTTATTGTT	-112085679	False	NA	-5	True	AATAAA	-17	NA	112087548	112070776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_112071571_112071901_112072077_112072757_112072899_112074709_112074851_112075936_112076113_112076321_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_12479.known	chr1	+	2294	10	FSM	ENSG00000117143.13	ENST00000367926.8	2294	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_8	57.0550957462809	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATTTGTACTTGAAGA	162558228	True	NA	20	True	AATAAA	-21	NA	162561532	162599837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162561778_162566011_162566349_162576776_162576982_162579427_162579604_162581286_162581460_162587474_162587669_162588692_162588834_162590322_162590512_162597791_162597859_162599270
transcript_124795.nic	chr6	-	796	7	ISM	ENSG00000074935.14	ENST00000605457.5	1645	12	-39	4947	-19	159	5prime_fragment	FALSE	canonical	3	106	junction_4	12.4286854583348	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	-112085679	False	NA	-7	True	AATAAA	-16	NA	112087548	112076275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112084188_112084247_112086555_112086609_112087232_112087307_112087409
transcript_124798.nic	chr6	-	738	6	ISM	ENSG00000074935.14	ENST00000604743.5	959	8	-50	1566	-19	159	5prime_fragment	FALSE	canonical	3	32	junction_3	38.8710689330767	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTATTATGTATGTGT	-112085679	False	NA	-7	True	AATAAA	-16	NA	112087548	112076275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_112076510_112079632_112079755_112081091_112081208_112086555_112086609_112087232_112087307_112087409
transcript_124801.known	chr6	-	547	4	FSM	ENSG00000074935.14	ENST00000603621.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	10.1434160364686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACGTACTAGTACAGTT	-112085629	True	NA	NA	False	GATAAA	-38	NA	112087498	112083915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112084247_112086555_112086609_112087232_112087307_112087409
transcript_124804.known	chr6	+	598	4	FSM	ENSG00000203778.8	ENST00000604268.1	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.661803619433	2429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	112085585	True	NA	27	True	AATAAA	-28	NA	112087637	112100895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_112087710_112097040_112097202_112099269_112099409_112100669
transcript_124807.nnic	chr6	+	799	3	NIC	ENSG00000203778.8	novel	2551	4	NA	NA	-304	0	intron_retention	FALSE	canonical	3	9	junction_1	127	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGCTCTTTACTTTT	NA	False	NA	27	True	AATAAA	-28	NA	112087286	112100895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_112087721_112099269_112099409_112100669
transcript_124809.known	chr6	-	619	2	FSM	ENSG00000112769.20	ENST00000368638.5	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATGTTGAGAGTTGAA	-112254470	True	NA	NA	False	AATAAA	-23	NA	112254567	112253781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112254292_112254458
transcript_124810.known	chr6	-	645	2	FSM	ENSG00000112769.20	ENST00000453937.2	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGATGTTGAGAGTTG	-112254481	True	NA	NA	False	AATAAA	-21	NA	112254578	112253783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112254292_112254441
transcript_124812.known	chr6	-	554	2	FSM	ENSG00000112769.20	ENST00000455073.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTGCATTTGGATGTTGA	NA	False	NA	NA	False	AATAAA	-15	NA	112254647	112253789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_112254292_112254595
transcript_124814.known	chr6	+	447	1	FSM	ENSG00000218208.1	ENST00000402798.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAACCAGAAGACAAGTAA	NA	False	NA	NA	False	NA	NA	NA	113581500	113581947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113581500_113581900
transcript_124815.known	chr6	+	4296	2	FSM	ENSG00000277443.3	ENST00000612661.2	4296	2	0	0	0	0	multi-exon	FALSE	canonical	3	1047	junction_1	0	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGCTAAAATAGGATTTT	113837229	True	NA	19	True	AATAAA	-24	NA	113857344	113863475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113857848_113859682
transcript_124868.known	chr6	+	2016	10	FSM	ENSG00000228624.8	ENST00000519104.5	2016	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.45452467048606	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTTTGATATTCATATT	NA	False	NA	NA	False	AATAAA	-19	NA	113969700	114340738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113970279_113991892_113992019_113993342_113993488_113995599_113996061_114088936_114089020_114116117_114116181_114178652_114178721_114179024_114179158_114235629_114235772_114340521
transcript_124870.known	chr6	+	591	4	FSM	ENSG00000228624.8	ENST00000436876.6	591	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGGATCAGAGTCATCT	113969800	False	NA	NA	False	TTTAAA	-16	NA	113970105	113995644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113970279_113991892_113992121_113993342_113993488_113995599
transcript_124873.known	chr6	+	563	4	FSM	ENSG00000228624.8	ENST00000449620.6	563	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAATGGTTTTATGAGCAT	113969929	False	NA	NA	False	AGTAAA	-4	NA	113970234	113995802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_113970324_113991892_113992019_113993342_113993488_113995599
transcript_124884.nnic	chr6	+	1212	4	NNC	ENSG00000228624.8	novel	786	6	NA	NA	-1565	66	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_2	34.1792659696229	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTAGGCTCATTGTA	114424035	True	NA	NA	False	AATAAA	-22	NA	114424046	114456700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_114424246_114425568_114425673_114448966_114449032_114455856
transcript_124921.known	chr6	+	850	2	FSM	ENSG00000228624.8	ENST00000517965.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTGTGCAGCCTGTTCT	NA	False	NA	NA	False	NA	NA	NA	114448959	114456634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_114449032_114455856
transcript_12493.known	chr1	+	1528	9	FSM	ENSG00000132196.16	ENST00000254521.8	1528	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_2	17.1227188261678	721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTCCTTCCTTTTGGAA	162789243	True	NA	1	True	AATAAA	-19	NA	162790701	162812823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_162790836_162792658_162792863_162796584_162796678_162797801_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_124939.known	chr6	-	2000	14	FSM	ENSG00000196591.12	ENST00000519108.5	2000	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	854.097558276134	4436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	-113970706	False	NA	30	True	ATTAAA	-14	NA	113970724	113940717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113970479
transcript_124942.known	chr6	-	2084	15	FSM	ENSG00000196591.12	ENST00000368632.6	2084	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	1102.96378092883	7717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTGTCTGTTTAT	-113920982	True	NA	30	True	ATTAAA	-14	NA	113971157	113940717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_113941089_113941707_113941766_113943350_113943507_113944279_113944411_113945361_113945471_113946007_113946149_113948978_113949088_113949167_113949261_113953276_113953419_113956012_113956152_113956618_113956694_113958648_113958767_113959905_113960019_113962366_113962395_113970856
transcript_124943.known	chr6	-	557	4	FSM	ENSG00000196591.12	ENST00000521163.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1466.79363086821	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGATGGACTCTTTGAG	-113920962	True	NA	NA	False	AATGAA	-40	NA	113971137	113956669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_113956694_113958648_113958767_113959905_113960040_113970856
transcript_124944.known	chr6	-	733	3	FSM	ENSG00000196591.12	ENST00000521233.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	3090	junction_2	73	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTAGTTTGCTCCCCTGA	-113920961	True	NA	NA	False	NA	NA	NA	113971136	113958426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_113958767_113959905_113960019_113970856
transcript_124947.known	chr6	+	896	3	FSM	ENSG00000287097.1	ENST00000656833.1	896	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGGTCTGTACGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	114822993	115002280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_114823036_114998256_114998420_115001589
transcript_124951.known	chr6	+	6919	12	FSM	ENSG00000178425.14	ENST00000319550.9	6919	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	38.043037829184	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTCTCTAGACAT	116094342	True	NA	4	True	ATTAAA	-15	NA	116100852	116249497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116221053_116221229_116223033_116223132_116236965_116237085_116238186_116238349_116238954_116239124_116243908
transcript_124961.known	chr6	+	667	7	FSM	ENSG00000178425.14	ENST00000419791.3	667	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	148.972872250845	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGATTAAAGTGGGTCCTG	116094340	True	NA	NA	False	NA	NA	NA	116100850	116145495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116101024_116106243_116106336_116108363_116108436_116110849_116110957_116115690_116115771_116117860_116117946_116145437
transcript_124964.nnic	chr6	-	2532	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-53	0	multi-exon	FALSE	canonical	3	48	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-116251441	False	NA	-3	True	AATAAA	-15	NA	116254128	116249963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_116250419_116252051
transcript_124965.nnic	chr6	-	2432	2	Genic_Genomic	ENSG00000187189.11	novel	4112	1	NA	NA	-32	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-116251420	True	NA	-3	True	AATAAA	-15	NA	116254107	116249963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr6_-_116250419_116252130
transcript_124966.known	chr6	-	4112	1	FSM	ENSG00000187189.11	ENST00000420283.3	4112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGTTGTCTAGGTTAA	-116251388	True	NA	-3	True	AATAAA	-15	NA	116254075	116249963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_116250000_116254100
transcript_124967.known	chr6	+	10621	6	FSM	ENSG00000111817.19	ENST00000644252.3	10621	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	10.8332820511607	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTCTATGGTGTTTTTG	116365395	True	NA	8	True	AATAAA	-21	NA	116370946	116444861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116371122_116399197_116399667_116426573_116426828_116430953_116431194_116433342_116433551_116435586
transcript_124968.known	chr6	+	1257	4	FSM	ENSG00000111817.19	ENST00000647046.1	1257	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.471404520791032	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATTTTAAAATATAAATG	116253957	True	NA	NA	False	AATAAA	-22	NA	116254206	116259240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116254384_116254839_116255003_116257215_116257338_116258445
transcript_12497.nic	chr1	+	1522	9	NIC	ENSG00000132196.16	novel	2541	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_3	62.9234405845707	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGTCTCTTTTCCTTCCTT	NA	False	NA	-5	True	AATAAA	-13	NA	162790675	162812817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_162790836_162792658_162792863_162796584_162796678_162797827_162797917_162799742_162799938_162803430_162803536_162804266_162804324_162805393_162805493_162812297
transcript_124973.nnic	chr6	+	1038	3	NIC	ENSG00000111817.19	novel	1257	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.5	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATTTTAAAATATAAATG	116253925	True	NA	NA	False	AATAAA	-22	NA	116254174	116259240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_116254296_116257215_116257338_116258445
transcript_124979.nnic	chr6	-	520	2	Antisense	novelGene_ENSG00000111817.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATAATAGCAATAATATTA	-116370719	True	NA	NA	False	ATTAAA	-18	NA	116370842	116351065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_116351328_116370584
transcript_124981.nnic	chr6	-	543	2	Antisense	novelGene_ENSG00000111817.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCATTTATAAATAATTG	-116370796	False	NA	NA	False	ATTAAA	-24	NA	116370850	116358395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_116358673_116370584
transcript_124983.known	chr6	+	2664	2	FSM	ENSG00000111817.19	ENST00000607094.1	2664	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATTATAATTTTTACAT	NA	False	NA	NA	False	AATAAA	-12	NA	116279142	116401272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116279732_116399197
transcript_124984.known	chr6	+	1117	4	FSM	ENSG00000164451.14	ENST00000628083.1	1117	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTTTCATAAAAATAGAT	NA	False	NA	NA	False	ATTAAA	-28	NA	116529012	116558588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116529191_116543764_116543873_116554284_116554352_116557824
transcript_124991.known	chr6	+	1427	8	FSM	ENSG00000111832.13	ENST00000487832.6	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	274.896789537381	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTTAGCCTTCCTTTTAG	116561253	True	NA	NA	False	GATAAA	-35	NA	116571488	116593588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116571656_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_124998.known	chr6	+	5385	7	FSM	ENSG00000111832.13	ENST00000466444.7	5385	7	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_4	54.3251527583883	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTGCAAAGCTACCTCAT	116561268	True	NA	NA	False	AATAAA	-19	NA	116571503	116597675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841_116588986_116590271_116590405_116590887_116590951_116592979
transcript_125001.known	chr6	+	857	7	FSM	ENSG00000111832.13	ENST00000368590.9	857	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	313.007676512183	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAGAATTTCTTAAATTG	116561173	True	NA	NA	False	NA	NA	NA	116571408	116590298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116571656_116572857_116572986_116574057_116574172_116580294_116580361_116584726_116584858_116588841_116588986_116590271
transcript_125005.nic	chr6	+	578	4	ISM	ENSG00000111832.13	ENST00000466444.7	5385	7	-105	8710	-10	-1333	5prime_fragment	FALSE	canonical	3	634	junction_1	40.4227658628155	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGCAGAAGAAGCTGAAAAG	116561163	True	NA	NA	False	GATAAA	-39	NA	116571398	116588965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_116571656_116580294_116580361_116584726_116584858_116588841
transcript_125006.known	chr6	+	2840	6	FSM	ENSG00000111834.13	ENST00000229554.10	2840	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.979795897113271	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTGTGGACTGTGATAT	116616416	True	NA	NA	False	NA	NA	NA	116616478	116632985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116617310_116622767_116623003_116627628_116628370_116629566_116629703_116630434_116630553_116632206
transcript_125012.nic	chr6	-	1901	10	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_9	40.879225911349	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666730	True	NA	-1	True	AATAAA	-22	NA	116668795	116635617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116666913_116668565
transcript_125014.known	chr6	-	2167	10	FSM	ENSG00000153975.10	ENST00000368576.8	2167	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_9	12.7888840621673	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666701	True	NA	-1	True	AATAAA	-22	NA	116668766	116635617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116660735_116660847_116666633_116667208_116668565
transcript_125018.nnic	chr6	-	2103	9	NIC	ENSG00000153975.10	novel	2167	10	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	18	junction_7	44.004971310069	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTTTTTCTTATCTA	-116666748	True	NA	-1	True	AATAAA	-22	NA	116668813	116635617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_116635880_116645713_116645935_116647458_116647611_116651571_116651738_116652003_116652193_116656683_116656853_116658802_116658925_116666633_116667208_116668565
transcript_125023.known	chr6	+	2150	15	FSM	ENSG00000196911.11	ENST00000356348.6	2150	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	25.2978179263891	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTAATGTTTTATGCTTTTT	116679715	True	NA	2	True	AATAAA	-17	NA	116681210	116741866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135_116732369_116741505
transcript_125024.known	chr6	+	11288	14	FSM	ENSG00000196911.11	ENST00000368564.7	11288	14	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_4	19.293436355158	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTTTTATGCTTTTTA	116679715	True	NA	3	True	AATAAA	-18	NA	116681210	116741867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116705071_116705161_116716218_116716319_116722125_116722290_116724296_116724376_116725750_116725877_116726494_116726623_116729562_116729742_116732135
transcript_125026.nnic	chr6	+	1323	7	NNC	ENSG00000196911.11	novel	11288	14	NA	NA	-32	5060	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	35.9335807041578	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAATTTCTTACCTA	116679659	True	NA	NA	False	AATAAA	-19	NA	116681154	116703858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_116681339_116689319_116689454_116692054_116692157_116692292_116692393_116698703_116698799_116702018_116702151_116703282
transcript_125031.known	chr6	+	689	6	FSM	ENSG00000196911.11	ENST00000413340.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	36.5097247319122	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCTAAAGTTTTCTTT	116679691	True	NA	NA	False	AAGAAA	-20	NA	116681186	116698798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_116681339_116681446_116681553_116689319_116689454_116692054_116692157_116692292_116692393_116698703
transcript_125032.nic	chr6	+	307	2	ISM	ENSG00000196911.11	ENST00000356348.6	2150	15	-56	52424	-32	-9356	5prime_fragment	FALSE	canonical	3	87	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGAACAGGTAGGTGTT	116679659	True	NA	NA	False	AATACA	-18	NA	116681154	116689442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_116681339_116689319
transcript_125033.nic	chr6	+	1522	2	ISM	ENSG00000196911.11	ENST00000356348.6	2150	15	-56	51209	-32	-8141	5prime_fragment	FALSE	canonical	3	87	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAACGATATTTATTT	116679659	True	NA	NA	False	NA	NA	NA	116681154	116690657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_116681339_116689319
transcript_125042.nnic	chr6	-	911	4	NNC	ENSG00000173612.10	novel	2622	5	NA	NA	12040	-14706	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	0.816496580927726	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATGTGGATTGCTAGTG	-116816969	True	NA	NA	False	AATAAA	-21	NA	116816997	116806817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_116807207_116809313_116809618_116816151_116816241_116816868
transcript_125049.known	chr6	-	4590	8	FSM	ENSG00000047932.14	ENST00000052569.10	4590	8	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_6	10.3509833901353	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-117596689	True	NA	-4	True	AATAAA	-24	NA	117602528	117560268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117578899_117579065_117602003
transcript_125053.nic	chr6	-	783	4	ISM	ENSG00000047932.14	ENST00000535237.2	4460	8	-21	15047	-21	-15047	5prime_fragment	FALSE	canonical	2	2	junction_2	67.6773390598524	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGCACAACTTGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	117602563	117575318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_117575353_117577447_117577472_117578899_117579065_117602003
transcript_125057.nic	chr6	-	759	3	ISM	ENSG00000047932.14	ENST00000052569.10	4590	8	-35	15050	-21	-15047	5prime_fragment	FALSE	canonical	3	142	junction_1	3	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGAAGCACAACTTGAA	NA	False	NA	NA	False	AAAAAG	-7	NA	117602563	117575318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_117575353_117578899_117579065_117602003
transcript_125059.nic	chr6	-	730	2	ISM	ENSG00000047932.14	ENST00000535237.2	4460	8	-21	18623	-21	-18623	5prime_fragment	FALSE	canonical	3	148	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTTAGAGAGTGACATGC	NA	False	NA	NA	False	NA	NA	NA	117602563	117578894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_117579065_117602003
transcript_125060.known	chr6	-	4460	8	FSM	ENSG00000047932.14	ENST00000535237.2	4460	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.2736748124001	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTTGGCTTGTTATT	-117596703	True	NA	-7	True	AATAAA	-21	NA	117602542	117560271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_117563385_117566853_117567035_117570859_117570956_117573466_117573633_117575176_117575353_117577447_117577472_117578899_117579065_117602003
transcript_125061.known	chr6	-	4597	9	FSM	ENSG00000047932.14	ENST00000368498.7	4597	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	65.6900867711407	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTTGTTATTTAT	-117596672	True	NA	-4	True	AATAAA	-24	NA	117602511	117560268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_117563385_117566853_117567035_117569571_117569737_117570859_117570956_117573466_117573633_117575176_117575353_117577447_117577472_117578899_117579065_117602003
transcript_125063.nnic	chr6	-	1246	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	-17	65199	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	13.8884444373331	64	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTAAGCCTCATGTTT	-117675338	False	NA	NA	False	ATTAAA	-17	NA	117675349	117608547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_125065.nnic	chr6	-	1083	4	NNC	ENSG00000289372.1	novel	572	2	NA	NA	-17	65036	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	13.8884444373331	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAATTGAAAACC	-117675338	False	NA	NA	False	NA	NA	NA	117675349	117608710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_117609147_117662905_117663067_117664629_117664863_117675096
transcript_125072.known	chr6	+	4796	5	FSM	ENSG00000153989.8	ENST00000368494.4	4796	5	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	5.04975246918104	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTCCACATTCAGTTA	117670823	True	NA	102	True	AATAAA	-14	NA	117675468	117710727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_117676086_117693041_117693168_117694030_117694181_117703604_117703705_117706924
transcript_125077.nic	chr6	-	2642	12	NIC	ENSG00000111860.14	novel	7373	13	NA	NA	-186	-4432	combination_of_known_junctions	TRUE	canonical	3	21	junction_11	7.40113906801732	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAATTACCTTTGGAAAAT	NA	False	NA	NA	False	AAAAAG	-9	NA	118574254	118465212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_118465569_118469071_118469304_118470536_118470645_118479870_118479922_118480395_118480514_118481778_118481934_118483705_118483859_118491685_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118573990
transcript_125079.known	chr6	-	1872	8	FSM	ENSG00000111860.14	ENST00000392500.7	1872	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.6177761955106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTGTTCTCCTTTTCCTT	-118710025	True	NA	NA	False	AGTAAA	-31	NA	118710068	118491430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_118491866_118511297_118511416_118523801_118523921_118565528_118566317_118632452_118632612_118652699_118652809_118664410_118664522_118710035
transcript_125085.known	chr6	-	2442	7	FSM	ENSG00000111877.18	ENST00000316068.7	2442	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	14.2409815516893	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTGGAATGTTTCCTAA	-118934014	True	NA	-1	True	AATAAA	-17	NA	118935114	118910596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_118911770_118913294_118913421_118917560_118917762_118922004_118922087_118923810_118924128_118931419_118931739_118934890
transcript_125087.known	chr6	+	2434	4	FSM	ENSG00000111875.8	ENST00000229595.6	2434	4	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_2	61.584630117154	1976	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCTCAGTGGTTAATATAA	118889650	True	NA	-71	True	AATAAA	-20	NA	118894151	118909171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_118894523_118900765_118900882_118905651_118905829_118907401
transcript_125089.nic	chr6	-	1341	5	ISM	ENSG00000111879.20	ENST00000522284.5	2721	8	54651	5890	-4462	0	internal_fragment	FALSE	canonical	3	46	junction_3	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	NA	False	NA	NA	False	AATAAA	-20	NA	119024528	119011176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_119011432_119016746_119016945_119019977_119020160_119022944_119023081_119023958
transcript_125092.known	chr6	-	542	3	FSM	ENSG00000111879.20	ENST00000448815.2	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTGAATTTTTCATG	-119020013	False	NA	NA	False	AATAAA	-20	NA	119020066	119011176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_119011432_119016746_119016945_119019977
transcript_125093.known	chr6	-	5018	13	FSM	ENSG00000111885.7	ENST00000368468.4	5018	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	8.09320702811932	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTGTTATATTTTTCT	-119348582	True	NA	NA	False	AATAAA	-18	NA	119349761	119177204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_119179946_119180311_119180428_119188404_119188578_119189663_119189884_119193776_119193893_119201253_119201348_119204758_119204883_119248259_119248355_119290682_119290764_119301987_119302104_119306895_119306993_119348462_119349288_119349541
transcript_125097.known	chr6	-	5101	32	FSM	ENSG00000146350.14	ENST00000398212.7	5101	32	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_10	4.20197664204743	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGCTTTTTTTTTCGTTT	-121333926	True	NA	NA	False	ATTAAA	-17	NA	121334480	121079493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_121080891_121090852_121091042_121106022_121106164_121112504_121112660_121113061_121113178_121115171_121115242_121126377_121126462_121131626_121131753_121160009_121160104_121160947_121161057_121205074_121205164_121223235_121223353_121239069_121239189_121241464_121241553_121242200_121242340_121255327_121255411_121256083_121256286_121279120_121279246_121281543_121281687_121283817_121283911_121292052_121292194_121294569_121294661_121299445_121299506_121303616_121303762_121304364_121304427_121304521_121304626_121304754_121304834_121307975_121308102_121310778_121310848_121317494_121317673_121321632_121321795_121334275
transcript_125098.known	chr6	+	3083	2	FSM	ENSG00000152661.9	ENST00000282561.4	3083	2	0	0	0	0	multi-exon	FALSE	canonical	3	1171	junction_1	0	1202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTATATTCCGTGTGAT	121407421	True	NA	20	True	AATAAA	-23	NA	121435645	121449727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_121435833_121446831
transcript_1251.nic	chr1	+	1803	8	NIC	ENSG00000169598.17	novel	3152	8	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	10.946996606096	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3857243	True	NA	NA	False	AATAAA	-18	NA	3857268	3885429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506_3883801_3885037
transcript_125100.known	chr6	+	2596	13	FSM	ENSG00000025156.13	ENST00000368455.9	2596	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	32.939654420369	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	122397692	True	NA	NA	False	AATATA	-11	NA	122399651	122433119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122427902_122427957_122431429_122431515_122431924
transcript_125102.known	chr6	+	2643	12	FSM	ENSG00000025156.13	ENST00000452194.5	2643	12	0	0	0	0	multi-exon	TRUE	canonical	3	87	junction_10	13.6678424542929	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACAAGGGAGAAATATAAT	122397591	True	NA	NA	False	AATATA	-11	NA	122399550	122433119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134_122420223_122422149_122422299_122422717_122422958_122423580_122423687_122431429_122431515_122431924
transcript_125103.nic	chr6	+	959	7	ISM	ENSG00000025156.13	ENST00000368455.9	2596	13	-4	12709	-4	-11582	5prime_fragment	FALSE	canonical	3	107	junction_5	8.44590630621328	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTCCAGTTGCCTGTTT	122397688	True	NA	NA	False	AATAAA	-15	NA	122399647	122420410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_122399831_122412372_122412482_122412636_122412765_122413524_122413650_122416220_122416297_122419167_122419230_122420134
transcript_125105.nic	chr6	+	638	3	ISM	ENSG00000025156.13	ENST00000368455.9	2596	13	-39	20172	-39	-19045	5prime_fragment	FALSE	canonical	3	112	junction_2	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAAGTTCCTGCTAGAAT	122397653	True	NA	NA	False	NA	NA	NA	122399612	122412947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_122399831_122412372_122412482_122412636
transcript_125106.nic	chr6	+	790	2	ISM	ENSG00000025156.13	ENST00000368455.9	2596	13	-38	20174	-38	-19047	intron_retention	FALSE	canonical	3	130	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTTAAGTTCCTGCTAGA	122397654	True	NA	NA	False	NA	NA	NA	122399613	122412945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_122399831_122412372
transcript_125107.known	chr6	-	3125	10	FSM	ENSG00000111897.7	ENST00000339697.5	3125	10	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	24.6215804168259	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGTGTACTGATTAT	-122468991	True	NA	-4	True	AATAAA	-15	NA	122471807	122443350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_122445180_122446773_122447005_122447120_122447266_122451663_122451755_122451887_122452058_122453769_122453908_122454150_122454231_122456480_122456651_122458519_122458682_122471698
transcript_12512.known	chr1	+	2984	5	FSM	ENSG00000117152.14	ENST00000367909.11	2984	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	0.707106781186548	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGCTTGGAAACACATTAA	163069187	True	NA	NA	False	AATAAA	-18	NA	163069360	163076802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163069529_163072394_163072500_163072804_163072867_163073455_163073623_163074320
transcript_125124.nic	chr6	+	1456	7	NIC	ENSG00000135549.15	novel	464	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	68.7719661877813	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTGTGTATGTGTG	122481247	True	NA	12	True	ATTAAA	-23	NA	122482052	122725892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_122482267_122585492_122585554_122585920_122586008_122633282_122633368_122675077_122675145_122717786_122717964_122725127
transcript_125131.known	chr6	+	629	5	FSM	ENSG00000135549.15	ENST00000607474.5	629	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.11247489949718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGAAATCTTCTATGAA	122471880	True	NA	NA	False	NA	NA	NA	122471933	122493475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122472042_122477850_122477940_122481898_122481957_122482146_122482267_122493221
transcript_125143.known	chr6	+	785	4	FSM	ENSG00000164434.12	ENST00000368444.8	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.5143607047182	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGTTGTTTCTAATA	122778386	True	NA	15	True	AATAAA	-17	NA	122779715	122784074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122779868_122780290_122780464_122781092_122781195_122783716
transcript_125145.known	chr6	+	2086	3	FSM	ENSG00000164434.12	ENST00000356535.4	2086	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	13	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCGCTCTGAAGTTCTCC	122778429	False	NA	NA	False	AATAAA	-22	NA	122779758	122782896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122779868_122780290_122780464_122781092
transcript_125146.known	chr6	+	1763	8	FSM	ENSG00000172594.13	ENST00000368440.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.13052351280027	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAGTTTTCTTAAC	122788894	True	NA	7	True	AATAAA	-21	NA	122789257	122809720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122789459_122795676_122795891_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_125148.known	chr6	+	1755	7	FSM	ENSG00000172594.13	ENST00000539041.5	1755	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.19324854180304	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGATGAAGTTTTCTT	122787719	False	NA	4	True	AATAAA	-18	NA	122789048	122809717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_122789459_122796823_122796969_122801309_122801407_122803663_122803834_122804908_122805090_122806232_122806358_122809090
transcript_125156.nnic	chr6	-	927	6	NNC	ENSG00000186439.14	novel	1294	6	NA	NA	49110	-1785	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_5	112.132778436994	79	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTATGTTTATTCT	-123587783	True	NA	NA	False	AATACA	-16	NA	123587799	123530498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_123530566_123547339_123547373_123548453_123548613_123570922_123571133_123580483_123580601_123587458
transcript_125176.known	chr6	-	1598	3	FSM	ENSG00000236548.3	ENST00000664931.2	1632	3	0	34	0	-7	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATATTGAAACCTCT	-124963123	False	NA	NA	False	AATGAA	-34	NA	124963145	124940417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_124941525_124947930_124948099_124962822
transcript_125178.known	chr6	-	1457	3	FSM	ENSG00000236548.3	ENST00000664507.1	1457	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAACCTCTTATTTGG	-124962895	False	NA	NA	False	AATAAA	-1	NA	124962917	124940410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_124941605_124947930_124948099_124962822
transcript_125179.known	chr6	+	1308	6	FSM	ENSG00000111907.21	ENST00000368402.9	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	64.7722162659269	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTAATTTCTT	125151251	True	NA	7	True	ATTAAA	-18	NA	125153732	125263497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125153971_125220077_125220194_125229117_125229267_125248281_125248384_125253716_125253756_125262833
transcript_1252.known	chr1	+	2833	7	FSM	ENSG00000169598.17	ENST00000378209.8	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.10960933531265	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCAAGAAAGTTTGCAC	3856854	True	NA	NA	False	AATAAA	-18	NA	3857475	3885429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_3857718_3858717_3858845_3865811_3866001_3867973_3868054_3869604_3869776_3872471_3872573_3883506
transcript_125200.known	chr6	-	1446	6	FSM	ENSG00000111906.18	ENST00000398153.7	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_4	218.357138651339	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCTGCCTTTACATT	-125292970	True	NA	NA	False	GATAAA	-7	NA	125301967	125275349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125298713_125298817_125300537_125300660_125301848
transcript_125201.known	chr6	-	1350	5	FSM	ENSG00000111906.18	ENST00000318787.13	1350	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_3	193.616889759132	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTGTCTGCCTTTACATT	-125292977	True	NA	NA	False	GATAAA	-7	NA	125301974	125275349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125276244_125277101_125277241_125292840_125292910_125300537_125300660_125301848
transcript_125202.known	chr6	-	879	5	FSM	ENSG00000111906.18	ENST00000608295.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	396.898837866779	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTAGAATATTTATTGGAG	-125292940	True	NA	-30	True	AATAAA	-21	NA	125301937	125275881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125276244_125277101_125277241_125298649_125298817_125300537_125300660_125301848
transcript_125203.nic	chr6	-	595	6	NIC	ENSG00000237742.8	novel	528	5	NA	NA	-33	-4	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.8508882848198	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125745643	False	NA	-2	True	AATAAA	-21	NA	125745658	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_125578726_125645633_125645701_125657428_125657467_125720423_125720508_125744901_125745066_125745584
transcript_125208.known	chr6	-	509	5	FSM	ENSG00000237742.8	ENST00000606334.6	528	5	15	4	15	-4	multi-exon	FALSE	canonical	2	5	junction_2	9.28372231381357	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125745422	True	NA	-2	True	AATAAA	-21	NA	125745610	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125578726_125645633_125645701_125720423_125720508_125744901_125745066_125745584
transcript_125210.nnic	chr6	-	562	4	NNC	ENSG00000237742.8	novel	475	5	NA	NA	37574	-4	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	12.0830459735946	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	NA	False	NA	-2	True	AATAAA	-21	NA	125707454	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125657428_125657467_125707165
transcript_125211.nnic	chr6	-	592	4	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37609	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.6707311029399	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125702463	True	NA	-2	True	AATAAA	-21	NA	125707419	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125681598_125681702_125707165
transcript_125212.nnic	chr6	-	744	4	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37586	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	41.7851648315524	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	NA	False	NA	-2	True	AATAAA	-21	NA	125707442	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125694166_125694399_125707165
transcript_125213.nnic	chr6	-	519	4	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37681	-4	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_2	13.4742552876052	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125702391	False	NA	-2	True	AATAAA	-21	NA	125707347	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125705044_125705147_125707165
transcript_125218.nnic	chr6	-	1118	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	39101	-4	at_least_one_novel_splicesite	FALSE	canonical	1	13	junction_2	8	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125700971	False	23	-2	True	AATAAA	-21	NA	125705927	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125705044
transcript_125219.nnic	chr6	-	506	3	NNC	ENSG00000237742.8	novel	1685	4	NA	NA	37592	-4	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	10	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTATCACATATCTTC	-125702480	True	NA	-2	True	AATAAA	-21	NA	125707436	125578557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_125578726_125645633_125645701_125707165
transcript_125220.known	chr6	-	475	5	FSM	ENSG00000237742.8	ENST00000427852.6	475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.9772492000501	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAGCCACATAGTTATCA	-125745013	False	NA	-11	True	AATAAA	-12	NA	125745028	125578566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_125578726_125645633_125645701_125657428_125657467_125720423_125720508_125744901
transcript_125225.nnic	chr6	-	1000	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	50	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGAACTTTACATTCT	NA	False	NA	NA	False	AATAAA	-23	NA	125707442	125681210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125681702_125694166_125694399_125707165
transcript_125227.nnic	chr6	-	2320	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_2	14.5	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCCCACATAGCCAAAGCA	NA	False	NA	19	True	AAAAAG	-5	NA	125707442	125687835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_12523.known	chr1	-	581	6	FSM	ENSG00000143248.13	ENST00000531954.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	129.856844255511	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGAAGAACCTGGTGGA	-163321107	True	NA	NA	False	NA	NA	NA	163321735	163147473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163147504_163152549_163152717_163161914_163161977_163168257_163168369_163306232_163306330_163321621
transcript_125230.nnic	chr6	-	820	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_2	14.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATTTTGAAGTGTCAT	NA	False	NA	NA	False	AATAAA	-31	NA	125707442	125689335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125689647_125694166_125694399_125707165
transcript_125232.nnic	chr6	-	794	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	11	61	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-125702476	True	NA	NA	False	AATAAA	-22	NA	125707432	125701883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125702309_125705044_125705147_125707165
transcript_125235.nnic	chr6	-	925	3	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	20	junction_1	13	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-125702476	True	NA	NA	False	AATAAA	-16	NA	125707432	125701889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125702446_125705044_125705147_125707165
transcript_125237.nnic	chr6	-	736	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAAAATTTATTGAACTT	-125702462	True	NA	NA	False	AATAAA	-15	NA	125707418	125681218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125681702_125707165
transcript_125239.nnic	chr6	-	824	2	Antisense	novelGene_ENSG00000224506.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	100	junction_1	0	374	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	125707564	125701883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_125702309_125707165
transcript_125241.known	chr6	+	2461	5	FSM	ENSG00000135547.9	ENST00000368365.5	2461	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	75.6319211708919	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	125747633	True	NA	6	True	ATTAAA	-19	NA	125747663	125761269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125747727_125751800_125751880_125752006_125752091_125754464_125754547_125759116
transcript_125242.known	chr6	+	2626	5	FSM	ENSG00000135547.9	ENST00000368364.4	2626	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	18.6212244495361	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTATGTGGATGAGTTG	125748264	True	NA	6	True	ATTAAA	-19	NA	125749631	125761269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125749860_125751800_125751880_125752006_125752091_125754464_125754547_125759116
transcript_125246.nnic	chr6	+	553	3	NNC	ENSG00000111912.20	novel	5521	17	NA	NA	-46	-66296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGAGTCCATAGAGAGAA	125781007	True	NA	NA	False	AATAAA	-29	NA	125781114	125788944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_125781372_125786136_125786214_125788725
transcript_125247.known	chr6	+	765	6	FSM	ENSG00000111912.20	ENST00000417494.5	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.65513337649941	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATATTATGCACTGA	125790066	True	NA	NA	False	GATAAA	-7	NA	125790939	125881203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125791068_125815290_125815405_125855019_125855241_125874888_125874969_125878262_125878371_125881089
transcript_125253.known	chr6	+	3325	5	FSM	ENSG00000111911.7	ENST00000229633.7	3325	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	3.56195171219375	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTGTCTGGACTTTT	125955207	True	NA	16	True	AATAAA	-21	NA	125956769	125980244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125957179_125966886_125967005_125972258_125972329_125974846_125974974_125977643
transcript_12527.known	chr1	-	851	5	FSM	ENSG00000143248.13	ENST00000530507.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	113.588071556832	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGATATCTTCAGCTTGT	-163202872	False	NA	-47	True	NA	NA	NA	163202903	163147116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163147504_163152537_163152717_163161914_163161977_163168257_163168369_163202791
transcript_125278.known	chr6	+	1843	13	FSM	ENSG00000066651.20	ENST00000334379.11	1843	13	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_7	38.6465464893767	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981520	True	NA	17	True	AATAAA	-22	NA	125986539	126039276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_125986623_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_125281.nic	chr6	+	2074	13	NIC	ENSG00000066651.20	novel	1843	13	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	91.102925614689	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTCATATCTAGTTGTC	125981440	True	NA	17	True	AATAAA	-22	NA	125986459	126039276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_125986774_125993756_125993823_125995966_125996041_125998052_125998135_125998222_125998316_125998549_125998685_125999456_125999614_126008391_126008473_126011252_126011418_126012770_126012853_126012969_126013102_126021159_126021281_126038704
transcript_125299.known	chr6	+	809	3	FSM	ENSG00000203760.9	ENST00000368328.5	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_2	67	5411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAATGCAGTCAAATCTAG	126317522	True	NA	91	True	AAGAAA	-2	NA	126340114	126348875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126340400_126346204_126346319_126348465
transcript_125300.known	chr6	+	528	3	FSM	ENSG00000203760.9	ENST00000368325.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	809.5	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	126317581	True	NA	21	True	ATTAAA	-17	NA	126340173	126348608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126340445_126346204_126346319_126348465
transcript_125301.known	chr6	+	443	3	FSM	ENSG00000203760.9	ENST00000368326.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	866	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTTGTATTTTTT	126317581	True	NA	21	True	ATTAAA	-17	NA	126340173	126348608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_126340400_126346244_126346319_126348465
transcript_125302.nic	chr6	+	2180	5	NIC	ENSG00000118518.17	novel	2169	5	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_3	37.1618083521241	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127266773	False	NA	29	True	AATAAA	-20	NA	127266819	127288362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_127266926_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_125304.known	chr6	+	2169	5	FSM	ENSG00000118518.17	ENST00000608991.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.9552093756753	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127266926_127280230_127280341_127285207_127285349_127286049_127286178_127286615
transcript_125305.known	chr6	+	568	5	FSM	ENSG00000118518.17	ENST00000610162.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	38.7257988942772	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAAACATGCTTCCTAC	127264408	True	NA	NA	False	NA	NA	NA	127266882	127286643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127280515_127280605_127286049_127286178_127286615
transcript_125307.known	chr6	+	2267	4	FSM	ENSG00000118518.17	ENST00000356799.6	2267	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.8884444373331	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGTGAGACTTAAAATTC	127264374	True	NA	NA	False	AATAAA	-23	NA	127266848	127288567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127266926_127280230_127280341_127286049_127286178_127286615
transcript_125310.known	chr6	+	884	4	FSM	ENSG00000118518.17	ENST00000476956.5	884	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	13.0724477007517	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGCAGCAAGTAGAG	127266679	False	NA	NA	False	NA	NA	NA	127266725	127286891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127286049_127286178_127286615
transcript_125313.known	chr6	+	2119	3	FSM	ENSG00000118518.17	ENST00000368314.6	2119	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	9	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAAGCCTGTGAGACTTAA	127264389	True	NA	NA	False	AATAAA	-18	NA	127266863	127288562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127266926_127280230_127280341_127286615
transcript_125316.nic	chr6	+	443	3	ISM	ENSG00000118518.17	ENST00000608340.5	512	4	-46	816	-3	-803	5prime_fragment	FALSE	canonical	3	8	junction_2	35	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTTGAAGATTGAATG	127264362	True	NA	NA	False	AGTAAA	-13	NA	127266836	127285281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_127267096_127280230_127280341_127285207
transcript_125319.known	chr6	+	2070	3	FSM	ENSG00000118518.17	ENST00000610153.1	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	13.5	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTCTCTTGTTTGAG	127264408	True	NA	29	True	AATAAA	-20	NA	127266882	127288362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267096_127280230_127280341_127286615
transcript_125322.known	chr6	+	610	3	FSM	ENSG00000118518.17	ENST00000489534.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	22	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCAGTACGATGAGCGC	127264408	True	NA	NA	False	AAGAAA	-6	NA	127266882	127286953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_127267045_127280230_127280341_127286615
transcript_125325.known	chr6	-	1009	7	FSM	ENSG00000093144.19	ENST00000430841.6	1009	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	280.191601111335	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTTTCGTGTGGATGT	-127343378	False	NA	-110	True	AATAAA	-4	NA	127343398	127289868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127331829_127331868_127343335
transcript_125333.known	chr6	-	1515	5	FSM	ENSG00000093144.19	ENST00000454591.6	1515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	269.517160863645	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTAGCCATGACATGGAA	-127339801	True	NA	NA	False	ACTAAA	-3	NA	127343562	127289266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127343335
transcript_125345.known	chr6	-	2339	6	FSM	ENSG00000093144.19	ENST00000454859.8	2339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	226.621799480986	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTGTGTAAAGTGAATT	-127343589	False	NA	-1	True	AATAAA	-22	NA	127343609	127288711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127316449_127316503_127327001_127327145_127330808_127331031_127343335
transcript_125346.known	chr6	-	1966	4	FSM	ENSG00000093144.19	ENST00000368295.8	1966	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	290.669342495329	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCCATAGATGTAAAAACTA	NA	False	NA	-51	True	NA	NA	NA	127331030	127288761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127326997_127327145_127330808
transcript_125347.known	chr6	-	1354	5	FSM	ENSG00000093144.19	ENST00000368291.6	1354	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	253.109042706893	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGCTGTCAATTCCA	-127339838	True	NA	-5	True	AATATA	-16	NA	127343599	127289633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_127290278_127314815_127314897_127327001_127327145_127330808_127331031_127343335
transcript_125351.nnic	chr6	+	606	3	NNC	ENSG00000184530.9	novel	1203	6	NA	NA	9292	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATTTTGCTCATGATT	NA	False	NA	NA	False	ATTAAA	-33	NA	127586465	127591820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_127586555_127590086_127590326_127591542
transcript_125352.nic	chr6	-	1176	6	NIC	ENSG00000152894.15	novel	558	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	61.4882102520475	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGTGTCAAATAATTTT	NA	False	NA	NA	False	AATAAA	-21	NA	128520616	128235379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_128235605_128240034_128240151_128242520_128242603_128322038_128322311_128397565_128397689_128520258
transcript_125357.nic	chr6	-	1407	4	ISM	ENSG00000152894.15	ENST00000524534.5	2441	14	-101	178513	0	-6569	5prime_fragment	FALSE	canonical	3	135	junction_1	15.6418242755334	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCAGGCGTGGTGGTGC	NA	False	NA	NA	False	NA	NA	NA	128520616	128241948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_128242603_128322038_128322311_128397565_128397689_128520258
transcript_125358.nnic	chr6	-	883	4	NNC	ENSG00000152894.15	novel	1456	4	NA	NA	0	16342	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	79.2127935794886	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTGCAAAGTTGCATT	NA	False	NA	NA	False	AATAAA	-15	NA	128520616	128304698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_128304829_128322038_128322311_128397565_128397689_128520258
transcript_125359.known	chr6	-	1722	3	FSM	ENSG00000152894.15	ENST00000525459.1	1722	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTGAGTTGAGTTTTC	NA	False	NA	NA	False	AAAAAG	-22	NA	128520587	128321040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_128322311_128397565_128397689_128520258
transcript_125363.nic	chr6	-	759	2	ISM	ENSG00000152894.15	ENST00000525459.1	1722	3	-29	76247	0	-75037	5prime_fragment	FALSE	canonical	3	170	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAGAATAAACAAAAAAA	NA	False	NA	NA	False	AATAAA	-40	NA	128520616	128397287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_128397689_128520258
transcript_125364.known	chr6	-	526	2	FSM	ENSG00000152894.15	ENST00000368202.4	526	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAATCGTTTATTTCCCT	NA	False	NA	NA	False	AATAAA	-20	NA	128520570	128518927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_128519142_128520258
transcript_125365.known	chr6	-	4414	15	FSM	ENSG00000146376.11	ENST00000368149.3	4414	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	6.26335308255368	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATTCTTAAAGGAG	-129709681	True	NA	4	True	AATAAA	-29	NA	129710177	129576131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_129578605_129580069_129580132_129583987_129584113_129599215_129599357_129600641_129600849_129605876_129605960_129607892_129608053_129611532_129611611_129616211_129616304_129618686_129618853_129629352_129629523_129634041_129634106_129638393_129638630_129641815_129642019_129710023
transcript_125368.known	chr6	+	4206	23	FSM	ENSG00000198945.8	ENST00000361794.7	4206	23	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	13.7209497779825	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTTTTTACATATGTAT	130017435	True	NA	103	True	AATAAA	-13	NA	130018580	130141438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130049755_130049831_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_125370.known	chr6	+	3165	22	FSM	ENSG00000198945.8	ENST00000533560.5	3165	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.6233125467956	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATAAATTAGGTAGTGT	130017443	True	NA	NA	False	AATAAA	-11	NA	130018588	130140480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_130018665_130022226_130022306_130042684_130042802_130049281_130049394_130051248_130051409_130052858_130052992_130055170_130055256_130057405_130057498_130060035_130060141_130066352_130066489_130068329_130068422_130070975_130071128_130078557_130078635_130083619_130083706_130086139_130086251_130092744_130092860_130094264_130094368_130104425_130104576_130120878_130120959_130133451_130133622_130133842_130133906_130139609
transcript_125382.known	chr6	-	4247	18	FSM	ENSG00000079819.19	ENST00000628542.2	4247	18	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_17	45.3022147078865	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCACTTCTCTTTTTCT	-131057556	True	NA	-3	True	AATAAA	-19	NA	131063322	130839346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130840599_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063154
transcript_12539.known	chr1	+	1964	14	FSM	ENSG00000143228.13	ENST00000271452.8	1964	14	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	35.1008690194012	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	163317345	True	NA	33	True	AGTAAA	-45	NA	163321953	163355759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_125392.known	chr6	-	4186	18	FSM	ENSG00000079819.19	ENST00000527411.5	4186	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.9484364028933	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAACTTGTCACTTCTCT	-131057492	True	NA	-9	True	AATAAA	-13	NA	131063258	130839352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_130840595_130858130_130858244_130863637_130863719_130865535_130865635_130867458_130867582_130869562_130870127_130885095_130885269_130890293_130890467_130894343_130894442_130894966_130895120_130899490_130899579_130900961_130901181_130904464_130904541_130908820_130908864_130926604_130926710_130955104_130955318_130955993_130956500_131063141
transcript_125393.known	chr6	+	3150	8	FSM	ENSG00000118507.18	ENST00000431975.7	3150	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	26.93226575644	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131134861	True	NA	6	True	AATAAA	-17	NA	131135466	131283532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131135783_131145284_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131281529
transcript_125394.known	chr6	+	2008	8	FSM	ENSG00000118507.18	ENST00000541650.5	2008	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	30.49924723059	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131135545	False	NA	6	True	AATAAA	-17	NA	131135736	131283532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131135783_131145287_131145417_131160058_131160199_131165080_131165218_131169112_131169274_131199460_131199574_131219660_131219809_131282398
transcript_125399.nnic	chr6	+	1197	4	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.0345184328831	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131199534	True	NA	6	True	AATAAA	-17	NA	131199883	131283532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131199972_131219660_131219809_131282398_131283012_131283184
transcript_125400.nnic	chr6	+	1500	4	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.077702307171	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131199567	True	NA	6	True	AATAAA	-17	NA	131199916	131283532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131199972_131200326_131200490_131219660_131219809_131282398
transcript_125404.nnic	chr6	+	1370	3	NNC	ENSG00000118507.18	novel	3150	8	NA	NA	-107	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	34	203	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	131199534	True	NA	6	True	AATAAA	-17	NA	131199883	131283532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131199972_131219660_131219809_131282398
transcript_125406.known	chr6	+	1006	3	FSM	ENSG00000118507.18	ENST00000537868.5	1006	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	38.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACATGTTTGGGATTTT	131199641	True	NA	NA	False	NA	NA	NA	131199990	131283184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131200063_131219660_131219809_131282398
transcript_125415.known	chr6	+	2461	2	FSM	ENSG00000118507.18	ENST00000342266.4	2461	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTTTCCTCATTTCTT	NA	False	NA	6	True	AATAAA	-17	NA	131250158	131283532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131250617_131281529
transcript_125417.known	chr6	-	5247	29	FSM	ENSG00000112282.18	ENST00000368068.8	5247	29	0	0	0	0	multi-exon	TRUE	canonical	2	84	junction_21	31.9542681828585	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATTGGAATGAGTGTCG	-131626589	False	NA	-4	True	AATAAA	-20	NA	131628242	131586731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_131587847_131589464_131589597_131590321_131590443_131591312_131591528_131592387_131592461_131593005_131593172_131594098_131594336_131595946_131596164_131596517_131596689_131598286_131598468_131598555_131598762_131600037_131600163_131602217_131602382_131603029_131603205_131604177_131604321_131605239_131605486_131606478_131606625_131607927_131608072_131610045_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_125420.nic	chr6	-	1797	11	ISM	ENSG00000112282.18	ENST00000539158.1	1636	15	-182	7220	0	-7220	5prime_fragment	FALSE	canonical	3	84	junction_3	10.2298582590376	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGGAATAGT	-131626589	False	NA	NA	False	NA	NA	NA	131628242	131609518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_131610247_131615906_131616003_131618406_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_125423.nic	chr6	-	1915	9	ISM	ENSG00000112282.18	ENST00000539158.1	1636	15	-182	15166	0	9496	5prime_fragment	FALSE	canonical	3	84	junction_1	9.97496867163	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATTTAATGCCGTAACTG	-131626589	False	NA	NA	False	AAGAAA	-11	NA	131628242	131617464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_131618520_131619826_131619897_131620627_131620730_131621880_131621980_131623350_131623463_131624864_131624990_131627395_131627484_131627640_131627673_131628010
transcript_12544.known	chr1	+	1842	14	FSM	ENSG00000143228.13	ENST00000367900.7	1842	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	43.156519867809	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTTGTTTTGTTTATT	163317326	True	NA	38	True	AATATA	-24	NA	163321934	163355764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_125450.nnic	chr6	+	1280	4	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-248	264	multi-exon	FALSE	canonical	0	0	junction_2	182.523057904109	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	131901679	False	NA	NA	False	AATAAA	-18	NA	131901714	132077657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131903946_131904235_132074792_132074898_132077207
transcript_125462.nnic	chr6	+	981	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-267	-149	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	44.5	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131901660	True	NA	10	True	ATTAAA	-21	NA	131901695	131907381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131904132_131904235_131906958
transcript_125465.nnic	chr6	+	2474	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-66	1	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	73.5	186	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACTTGTATGTTCATT	131901719	False	NA	120	True	AATAAA	-20	NA	131901896	131920566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131904132_131904235_131918449
transcript_125467.nnic	chr6	+	1285	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-248	-149	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_2	187	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131901679	False	NA	10	True	ATTAAA	-21	NA	131901714	131907381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131903946_131904235_131906821
transcript_125468.nnic	chr6	+	1148	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-248	-149	at_least_one_novel_splicesite	FALSE	canonical	3	114	junction_2	140	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131901679	False	NA	10	True	ATTAAA	-21	NA	131901714	131907381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131903946_131904235_131906958
transcript_12547.nic	chr1	+	1797	14	NIC	ENSG00000143228.13	novel	1842	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	62.902197024687	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGGCTGTTGTTTTGT	163317323	True	NA	33	True	AGTAAA	-45	NA	163321931	163355759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_163322067_163326074_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163345677_163345819_163347762_163347939_163348944_163349081_163355334
transcript_125471.nnic	chr6	+	944	3	Fusion	ENSG00000236673.5_ENSG00000280058.1	novel	601	3	NA	NA	-248	-524	multi-exon	FALSE	canonical	3	76	junction_2	159	40	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCTCTATTCTTGTGA	131901679	False	NA	9	True	AATATA	-18	NA	131901714	131911003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131903946_131904235_131910784
transcript_125473.nnic	chr6	+	2704	3	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-110	1	combination_of_known_splicesites	FALSE	canonical	3	172	junction_2	111	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCACTTGTATGTTCATT	131901646	True	NA	120	True	AATAAA	-20	NA	131901852	131920566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_131902152_131903946_131904235_131918449
transcript_125476.nnic	chr6	+	925	3	NNC	ENSG00000236673.5	novel	601	3	NA	NA	-154	-149	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	46	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131901798	False	NA	10	True	ATTAAA	-21	NA	131901808	131907381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131904075_131904235_131906958
transcript_12548.known	chr1	+	1845	13	FSM	ENSG00000143228.13	ENST00000524800.5	1845	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	80.3089088042748	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTTTGAAATATATATATT	NA	False	NA	1	True	AGTAAA	-13	NA	163321899	163355727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227_163328305_163328845_163328908_163336750_163336849_163338019_163338094_163339380_163339478_163340363_163340427_163343732_163343871_163347762_163347939_163348944_163349081_163355334
transcript_125484.nnic	chr6	+	920	3	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-110	264	multi-exon	FALSE	canonical	0	0	junction_2	25	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	131901646	True	NA	NA	False	AATAAA	-18	NA	131901852	132077657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131910784_131910956_132077207
transcript_125489.known	chr6	+	2305	2	FSM	ENSG00000236673.5	ENST00000454596.1	2305	2	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGCACTTGTATGTTCAT	131901785	False	NA	119	True	AATAAA	-19	NA	131901962	131920565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131902152_131918449
transcript_125490.nnic	chr6	+	801	2	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-189	-149	at_least_one_novel_splicesite	FALSE	canonical	3	91	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	131901763	False	NA	10	True	ATTAAA	-21	NA	131901773	131907381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131906958
transcript_125491.nnic	chr6	+	458	2	NIC	ENSG00000236673.5	novel	601	3	NA	NA	-113	31	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTGGCCCATTTATTTA	131901643	True	NA	NA	False	TATAAA	-25	NA	131901849	131907561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_131902152_131907405
transcript_125492.nnic	chr6	+	975	2	NNC	ENSG00000236673.5	novel	2305	2	NA	NA	-85	4079	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATTAGCCAGGCATG	131901671	False	NA	NA	False	NA	NA	NA	131901877	131924644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_131902152_131923943
transcript_125493.known	chr6	+	1337	1	FSM	ENSG00000280058.1	ENST00000622916.1	1337	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTAGTGCACTTTCCTGT	131910178	False	NA	34	True	AATGAA	-43	NA	131910190	131911527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_131910200_131911500
transcript_125502.nnic	chr6	+	961	4	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-127	264	multi-exon	FALSE	canonical	0	0	junction_2	6.59966329107444	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	131901825	False	NA	NA	False	AATAAA	-18	NA	131901835	132077657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131923943_131924071_132009856_132009925_132077207
transcript_125503.nnic	chr6	+	998	4	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-127	264	multi-exon	FALSE	canonical	0	0	junction_2	6.59966329107444	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	131901825	False	NA	NA	False	AATAAA	-18	NA	131901835	132077657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131923943_131924071_132074792_132074898_132077207
transcript_125509.nnic	chr6	+	829	3	Fusion	ENSG00000227220.1_ENSG00000236673.5	novel	601	3	NA	NA	-63	264	multi-exon	FALSE	canonical	1	3	junction_2	5.5	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTTGTTTTAAATTTA	131901722	False	NA	NA	False	AATAAA	-18	NA	131901899	132077657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_131902152_131923943_131924071_132077207
transcript_125513.known	chr6	-	2989	12	FSM	ENSG00000079931.15	ENST00000367963.8	2989	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	3.27777388678544	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTGGTATTTTATA	-132401065	True	NA	-17	True	AATAAA	-16	NA	132401475	132296054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_132297318_132297786_132297956_132315634_132315778_132320628_132320689_132322678_132322871_132323930_132324098_132328012_132328116_132328414_132328595_132372607_132372692_132372829_132372998_132374630_132374778_132401162
transcript_125515.known	chr6	-	2191	2	FSM	ENSG00000079931.15	ENST00000392401.3	2191	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGTCTGTGTGGCTA	-132401065	True	NA	NA	False	ATTAAA	-18	NA	132401475	132390421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_132392300_132401162
transcript_125519.known	chr6	-	15845	10	FSM	ENSG00000079950.14	ENST00000367941.7	15845	10	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_5	15.8962686824516	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCATTTTTACATTTT	-132508613	True	NA	NA	False	TATAAA	-23	NA	132513116	132445866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_132460851_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_125527.known	chr6	-	1090	10	FSM	ENSG00000079950.14	ENST00000367937.4	1090	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	64.4187688315896	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATTTTGAATGTAGTT	NA	False	NA	NA	False	NA	NA	NA	132513198	132461713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_132461861_132463992_132464076_132468402_132468476_132469950_132470048_132470573_132470627_132471462_132471601_132472281_132472376_132475592_132475663_132503445_132503589_132513006
transcript_125540.known	chr6	-	2452	14	FSM	ENSG00000146409.12	ENST00000275227.9	2452	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	26.6642503836262	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCTTGGTCTATTTTCA	-132794677	True	NA	-2	True	AATAAA	-21	NA	132798637	132769369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_132770337_132770889_132770940_132771035_132771130_132772131_132772207_132772992_132773089_132774221_132774314_132776327_132776430_132779267_132779405_132783932_132784090_132787433_132787582_132789763_132789838_132790176_132790273_132796981_132797122_132798413
transcript_125571.known	chr6	+	130	1	FSM	ENSG00000200534.1	ENST00000363664.1	130	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTAGTGATGGGAAACA	132817192	False	NA	NA	False	NA	NA	NA	132817218	132817348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_132817200_132817300
transcript_125572.known	chr6	+	503	6	FSM	ENSG00000112306.8	ENST00000230050.4	503	6	0	0	0	0	multi-exon	FALSE	canonical	3	6209	junction_1	1227.01106759475	751144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	132736038	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815089_132816460_132816564_132816959_132817062_132817479
transcript_125573.known	chr6	+	639	6	FSM	ENSG00000112306.8	ENST00000484616.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	3354.58281161756	16050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTCATGTCTGGCTTTTT	132736038	True	NA	14	True	AATAAA	-14	NA	132814568	132817564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_132814614_132814731_132814783_132814971_132815225_132816460_132816564_132816959_132817062_132817479
transcript_125574.known	chr6	+	1280	2	FSM	ENSG00000118526.7	ENST00000367882.5	1280	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGATATTTGGAGTGAT	133889072	True	NA	NA	False	AATAAA	-22	NA	133889112	133892257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_133889848_133891712
transcript_125581.known	chr6	-	5572	5	FSM	ENSG00000146411.6	ENST00000275230.6	5572	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.1650635094611	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTGCATAGATTTTAAA	-134052426	True	NA	NA	False	AATACA	-38	NA	134052624	133987580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_133991309_134001996_134002130_134006811_134006935_134028380_134029722_134052377
transcript_125582.known	chr6	+	808	6	FSM	ENSG00000028839.10	ENST00000367871.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_2	60.0779493658031	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCTCATACCAAGATAGA	133949157	True	NA	NA	False	NA	NA	NA	133953194	133984723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_133953426_133980081_133980261_133982567_133982651_133982816_133982881_133984375_133984480_133984576
transcript_125583.known	chr6	-	2401	12	FSM	ENSG00000118515.12	ENST00000237305.11	2401	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	10.5525054797819	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATTGTGTCATGTGTT	-134174818	False	NA	-4	True	AATAAA	-18	NA	134174896	134169251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134174731
transcript_125584.known	chr6	-	2686	12	FSM	ENSG00000118515.12	ENST00000413996.7	2686	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	17.7317010785907	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTGTGTCATGTGTTAT	NA	False	NA	-2	True	AATAAA	-20	NA	134175991	134169249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134170436_134170825_134170916_134171022_134171179_134171636_134171733_134172192_134172317_134172661_134172775_134173022_134173155_134173273_134173358_134173461_134173567_134174004_134174081_134174510_134174587_134175543
transcript_125589.known	chr6	-	7087	18	FSM	ENSG00000112339.15	ENST00000367837.10	7087	18	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_7	53.1567506381673	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATATGTAAAAAGAGAATAT	-135045548	True	NA	NA	False	NA	NA	NA	135054822	134960377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_125596.known	chr6	-	2703	17	FSM	ENSG00000112339.15	ENST00000367826.6	2703	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	166.718700210864	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACAAACTGTGTTTTGTT	-135045545	True	NA	-23	True	AATAAA	-19	NA	135054819	134964632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_134965291_134966328_134966474_134969237_134969339_134978678_134978788_134979177_134979269_134982457_134982563_134985340_134985410_134986065_134986184_134986735_134986811_134987644_134987792_134993757_134993876_134996776_134996943_134997396_134997657_135002733_135002843_135039572_135039768_135050581_135050648_135054648
transcript_125608.known	chr6	-	2793	5	FSM	ENSG00000112339.15	ENST00000367822.9	2793	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	338.35890707945	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGCATGTTCTTTGA	-135045610	True	NA	0	True	AATAAA	-22	NA	135054884	135035856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135038027_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_125609.known	chr6	-	638	5	FSM	ENSG00000112339.15	ENST00000367820.6	638	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	358.692329859449	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATAGTAGACAAGTTCA	-135045526	True	NA	NA	False	NA	NA	NA	135054800	135036695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135036795_135039572_135039768_135042000_135042127_135050581_135050648_135054648
transcript_125611.nic	chr6	-	634	4	ISM	ENSG00000112339.15	ENST00000367820.6	638	5	-96	2878	-12	-1725	5prime_fragment	FALSE	canonical	3	818	junction_1	16.9967317119759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATGCCTTTACTTGTTCT	-135045622	True	NA	4	True	NA	NA	NA	135054896	135039573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135039768_135042000_135042127_135050581_135050648_135054648
transcript_125613.known	chr6	-	551	4	FSM	ENSG00000112339.15	ENST00000524715.5	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	352.228461213584	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGACTGTATCTGGAAAGA	-135045543	True	NA	NA	False	NA	NA	NA	135054817	135002781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135002843_135039572_135039768_135042000_135042127_135054648
transcript_125614.known	chr6	+	790	2	FSM	ENSG00000232876.1	ENST00000447508.1	790	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGCCATGAACCACTA	135055001	True	NA	NA	False	AATAAA	-15	NA	135055032	135060550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_135055487_135060214
transcript_125617.known	chr6	-	3638	23	FSM	ENSG00000135541.22	ENST00000327035.10	3638	23	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	14.9401699349757	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGGCTTTTTTGATTTT	-135495797	True	NA	0	True	AATAAA	-14	NA	135497745	135387783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135388034_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_125623.nic	chr6	-	1320	8	ISM	ENSG00000135541.22	ENST00000265602.11	6063	29	-42	179605	-1	0	5prime_fragment	FALSE	canonical	3	12	junction_6	27.2681319567029	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495834	True	NA	NA	False	AAAAAG	-2	NA	135497782	135463136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_125628.nic	chr6	-	1235	7	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	-37	75353	-1	0	5prime_fragment	FALSE	canonical	3	33	junction_5	20.0333056017556	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495834	True	NA	NA	False	AAAAAG	-2	NA	135497782	135463136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_125633.known	chr6	-	5303	29	FSM	ENSG00000135541.22	ENST00000681340.1	5303	29	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_27	21.4816010500491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAGACCTATCCAAAT	-135495833	True	NA	NA	False	TATAAA	-2	NA	135497781	135284418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135285648_135290422_135290526_135300499_135300559_135318518_135318617_135323161_135323325_135358131_135358188_135394775_135394897_135404950_135404978_135411347_135411545_135427166_135427308_135428628_135428760_135429881_135430001_135431207_135431315_135433026_135433257_135438374_135438499_135442581_135442715_135447007_135447161_135448289_135448476_135453340_135453437_135455733_135455927_135457493_135457714_135463124_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495538_135495710_135497187_135497250_135497582
transcript_125635.nic	chr6	-	1117	7	ISM	ENSG00000135541.22	ENST00000680561.1	7890	27	-165	181861	-1	-2710	5prime_fragment	FALSE	canonical	3	12	junction_5	29.2973263854116	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-135495834	True	NA	NA	False	AAAAAG	-13	NA	135497782	135465846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_125637.nic	chr6	-	1177	6	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-61	68815	-5	0	5prime_fragment	FALSE	canonical	3	35	junction_5	21.0902821223425	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495838	True	NA	NA	False	AAAAAG	-2	NA	135497786	135463136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135463307_135465813_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_125640.nic	chr6	-	1032	6	ISM	ENSG00000135541.22	ENST00000327035.10	3638	23	-37	78063	-1	-2710	5prime_fragment	FALSE	canonical	3	33	junction_4	20.4978047605103	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-135495834	True	NA	NA	False	AAAAAG	-13	NA	135497782	135465846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_125643.known	chr6	-	712	6	FSM	ENSG00000135541.22	ENST00000488690.6	712	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.862073179296	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATAGTTTTTTTTTTTTTTT	-135495701	True	NA	NA	False	AATAAA	-22	NA	135497649	135489916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135490226_135490622_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_125645.known	chr6	-	1074	5	FSM	ENSG00000135541.22	ENST00000524469.5	1074	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33.2142665130513	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACTAAAGCAGGTTTGCTA	-135495789	True	NA	NA	False	AAAAAG	-2	NA	135497737	135463136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135463307_135465813_135466374_135490622_135490748_135492227_135492292_135497582
transcript_125646.nic	chr6	-	974	5	ISM	ENSG00000135541.22	ENST00000681477.1	3540	20	-61	71525	-5	-2710	5prime_fragment	FALSE	canonical	3	35	junction_4	21.3248681121361	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTTCCAGTCTTCTCTA	-135495838	True	NA	NA	False	AAAAAG	-13	NA	135497786	135465846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135466374_135467580_135467635_135490622_135490748_135492227_135492292_135497582
transcript_125647.known	chr6	-	719	5	FSM	ENSG00000135541.22	ENST00000680968.1	719	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.5661660009004	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATAGTTTTTTTTTTTTT	-135495795	True	NA	NA	False	AATAAA	-20	NA	135497743	135489918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_135490226_135490622_135490748_135492227_135492292_135497187_135497250_135497582
transcript_125650.nic	chr6	-	699	5	ISM	ENSG00000135541.22	ENST00000488690.6	712	6	-133	543	-1	0	5prime_fragment	FALSE	canonical	3	12	junction_3	32.6113477182407	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACTGTGAGAATATTGA	-135495834	True	NA	NA	False	AATAAA	-18	NA	135497782	135490459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135490748_135492227_135492292_135495813_135495899_135497187_135497250_135497582
transcript_125653.nic	chr6	-	614	4	ISM	ENSG00000135541.22	ENST00000680968.1	719	5	-39	541	-1	0	5prime_fragment	FALSE	canonical	3	33	junction_2	25.1396101799531	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACTGTGAGAATATTGA	-135495834	True	NA	NA	False	AATAAA	-18	NA	135497782	135490459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_135490748_135492227_135492292_135497187_135497250_135497582
transcript_125664.known	chr6	-	1789	8	FSM	ENSG00000146410.12	ENST00000420702.6	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_7	20.6930926067771	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTGTGTTTTGTAGCA	-136249333	True	NA	-6	True	AATAAA	-14	NA	136250311	136231033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136249975
transcript_125671.known	chr6	-	1524	8	FSM	ENSG00000146410.12	ENST00000451457.6	1524	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	26.1627558930317	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGTAGCAACCAAAATTC	-136249346	True	NA	4	True	AATAAA	-24	NA	136250324	136231023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136249036_136249154_136250263
transcript_125672.known	chr6	-	1586	9	FSM	ENSG00000146410.12	ENST00000367784.6	1586	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	45.1260387692073	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTTTTGTAGCAACCA	-136249314	True	NA	-2	True	AATAAA	-18	NA	136250292	136231029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136231389_136233324_136233500_136239465_136239821_136241443_136241677_136242860_136242974_136244764_136244870_136247460_136247561_136249036_136249154_136250263
transcript_125674.known	chr6	-	4373	13	FSM	ENSG00000029363.17	ENST00000527759.5	4373	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	193.004371712145	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGCACCTAGATTACAGCC	-136274116	True	NA	NA	False	NA	NA	NA	136289795	136259690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278771_136279762_136279877_136282583_136282688_136289712
transcript_125677.known	chr6	-	4186	13	FSM	ENSG00000029363.17	ENST00000530767.5	4186	13	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_9	194.528204181867	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGTGCATGACTATGTG	-136274102	True	NA	0	True	AATAAA	-32	NA	136289781	136259350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136261116_136261264_136261478_136267028_136267176_136268161_136268340_136269436_136269613_136271994_136272080_136273081_136273188_136275531_136275702_136275842_136275990_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_125686.nic	chr6	-	2290	8	ISM	ENSG00000029363.17	ENST00000628517.2	2512	10	5	2732	0	-77	5prime_fragment	FALSE	canonical	3	616	junction_4	58.6629946284326	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATGTTTTTGAATGTAAT	-136274167	True	NA	NA	False	AAGAAA	-8	NA	136289846	136271995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_136272080_136273081_136273188_136275531_136275702_136275842_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_125687.nic	chr6	-	1685	5	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-2	6612	0	-533	5prime_fragment	FALSE	canonical	3	616	junction_1	71.2894627557257	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGACAAAAATTCTGA	-136274167	True	NA	-23	True	NA	NA	NA	136289846	136276087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_136276509_136277864_136278777_136279762_136279877_136282583_136282688_136289712
transcript_125689.nic	chr6	-	752	4	ISM	ENSG00000029363.17	ENST00000529826.5	2423	9	-2	8901	0	1106	5prime_fragment	FALSE	canonical	3	730	junction_2	28.6627904356075	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGAAGGGGAACCCCAAGA	-136274167	True	NA	NA	False	AAAACA	-11	NA	136289846	136278376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_136278777_136279762_136279877_136282583_136282688_136289712
transcript_125690.known	chr6	-	3758	18	FSM	ENSG00000135525.19	ENST00000354570.8	3758	18	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_12	63.8090251884616	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTAGCTTTCTCATATGT	-136540034	True	NA	-29	True	AATAAA	-19	NA	136550422	136342733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136383670_136383782_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_125694.known	chr6	-	4497	17	FSM	ENSG00000135525.19	ENST00000618822.4	4497	17	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_12	138.617222504998	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTTCCTTCCTACACC	NA	False	NA	NA	False	NA	NA	NA	136550819	136342280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_136344239_136345855_136346080_136356691_136356795_136359819_136359878_136359980_136360032_136360696_136360799_136361004_136361180_136362449_136362703_136365734_136366019_136366326_136366440_136372500_136372626_136377754_136377869_136388392_136388511_136389353_136389518_136411619_136411698_136421700_136421800_136550341
transcript_125702.known	chr6	+	1454	10	FSM	ENSG00000112357.14	ENST00000318471.5	1454	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	16.8852335225519	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTCCCCCAAAAGACTG	136821179	True	NA	31	True	AATAAA	-27	NA	136822591	136913934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_136822796_136825213_136825272_136826318_136826470_136845614_136845693_136846072_136846182_136866626_136866734_136869889_136870004_136872197_136872254_136898141_136898242_136913457
transcript_125713.known	chr6	+	680	4	FSM	ENSG00000112357.14	ENST00000367756.8	680	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	54.7377586517956	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATTTGCTCTTATTAT	136821166	True	NA	NA	False	AATAAA	-13	NA	136822578	136830260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_136822796_136825213_136825272_136826318_136826470_136830006
transcript_125716.known	chr6	-	3486	7	FSM	ENSG00000016402.14	ENST00000316649.10	3486	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.92498812913071	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	NA	False	NA	NA	False	AATAAA	-42	NA	137044965	136999970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137011273_137011453_137016967_137017104_137044640
transcript_125718.known	chr6	-	3522	6	FSM	ENSG00000016402.14	ENST00000367748.4	3522	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.13687742827162	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTTATTAATTCCAT	NA	False	NA	NA	False	AATAAA	-42	NA	137045180	136999970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137002356_137004620_137004761_137008598_137008744_137009316_137009493_137016967_137017104_137044640
transcript_125719.nnic	chr6	-	302	2	NIC	ENSG00000016402.14	novel	655	3	NA	NA	239	12	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGAGCCTTGATCCTT	-137044622	True	NA	NA	False	ATTAAA	-17	NA	137044725	137037914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_137038132_137044640
transcript_125725.known	chr6	-	2492	7	FSM	ENSG00000027697.15	ENST00000644894.1	2492	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.7674811318899	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215566	False	NA	-15	True	AATAAA	-3	NA	137219244	137197496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137218671
transcript_125726.known	chr6	-	1948	7	FSM	ENSG00000027697.15	ENST00000645753.1	1948	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.7674811318899	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215444	False	3678	-15	True	AATAAA	-3	NA	137219122	137197496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219093
transcript_125727.known	chr6	-	2074	7	FSM	ENSG00000027697.15	ENST00000367739.9	2074	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	25.0161059230959	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTGTATTCATTTATTC	-137215707	True	NA	-3	True	AATAAA	-15	NA	137219385	137197484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137219242
transcript_125728.known	chr6	-	2519	8	FSM	ENSG00000027697.15	ENST00000646898.1	2519	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	108.150688525647	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215482	False	NA	-15	True	AATAAA	-3	NA	137219160	137197496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137215266_137215378_137218671
transcript_125729.known	chr6	-	2183	8	FSM	ENSG00000027697.15	ENST00000646036.1	2183	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	108.150688525647	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAAAACTCGTTTTTGT	-137215458	False	3678	-15	True	AATAAA	-3	NA	137219136	137197496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_137198640_137200880_137201009_137203498_137203686_137204331_137204505_137206135_137206309_137206962_137207078_137215266_137215378_137218983
transcript_125732.known	chr6	-	4198	3	FSM	ENSG00000112378.12	ENST00000421351.4	4198	3	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_1	0	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTGTGAGCATGCGTG	-138097138	True	NA	NA	False	AATAAA	-15	NA	138107419	138088504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138092269_138096353_138096495_138107126
transcript_125735.nnic	chr6	+	2057	3	NNC	ENSG00000112379.9	novel	14859	34	NA	NA	170230	-7778	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	21	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCTGGTAAGTCAAGC	138332054	False	NA	NA	False	AATAAA	-18	NA	138332168	138336885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_138332416_138333969_138335189_138336294
transcript_125738.known	chr6	-	947	4	FSM	ENSG00000135540.12	ENST00000426841.6	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	3.77123616632825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACTGGTGTCAAAGAACT	-138499009	True	NA	NA	False	TATAAA	-39	NA	138499494	138446789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138447194_138473305_138473434_138496218_138496372_138499232
transcript_125741.known	chr6	-	609	2	FSM	ENSG00000135540.12	ENST00000534376.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCTTGTATCTTGTA	-138572322	False	NA	NA	False	AATAAA	-15	NA	138572462	138571529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_138572062_138572385
transcript_125742.known	chr6	+	844	4	FSM	ENSG00000051620.11	ENST00000367697.7	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	498.833528232505	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAGTACTACTATTA	138404165	False	NA	34	True	AGTAAA	-20	NA	138404246	138413173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406034_138412879
transcript_125743.known	chr6	+	10010	4	FSM	ENSG00000051620.11	ENST00000607197.6	10010	4	0	0	0	0	multi-exon	TRUE	canonical	3	951	junction_3	84.0092587489948	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCTAGTCTTTTTTAG	138404141	True	NA	NA	False	ATTAAA	-18	NA	138404222	138422197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138404598_138405144_138405281_138405970_138406152_138412879
transcript_125745.nnic	chr6	+	693	4	NNC	ENSG00000051620.11	novel	10010	4	NA	NA	332	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.627066610029	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCTAGTGTCTTCT	138404567	False	NA	15	True	AGTAAA	-1	NA	138404578	138413154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_138404680_138405144_138405281_138405970_138406152_138412879
transcript_125746.nnic	chr6	+	756	4	NNC	ENSG00000051620.11	novel	512	3	NA	NA	374	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	503.627066610029	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTGTCTAGTGTCTTCT	138404609	False	NA	15	True	AGTAAA	-1	NA	138404620	138413154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_138404785_138405144_138405281_138405970_138406152_138412879
transcript_125753.known	chr6	+	774	2	FSM	ENSG00000225177.6	ENST00000447494.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGCAGTCACTTGAGTC	138695866	False	NA	37	True	AATAAA	-19	NA	138696367	138697288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138696756_138696902
transcript_125755.nnic	chr6	-	1038	3	NIC	ENSG00000279968.3	novel	2685	4	NA	NA	-69	-1574	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGAAGCCAAAGTCTT	NA	False	NA	-7	True	ATTAAA	-16	NA	138773721	138726784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_138727494_138764256_138764379_138773514
transcript_125756.nic	chr6	-	552	2	ISM	ENSG00000279968.3	ENST00000615663.2	572	5	0	13907	0	-13907	5prime_fragment	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGTTCCTGACCAT	-138773334	False	NA	NA	False	AATATA	-19	NA	138773414	138764034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_138764379_138773206
transcript_125758.known	chr6	+	1247	6	FSM	ENSG00000024862.18	ENST00000617445.5	1247	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	15.5306149266537	838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTGTCTGTTTTGAA	138772394	True	NA	9	True	AATAAA	-19	NA	138773768	138793319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_138773903_138776078_138776279_138779821_138779986_138785226_138785382_138788365_138788389_138792748
transcript_125779.known	chr6	+	782	3	FSM	ENSG00000146386.8	ENST00000367660.4	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_2	22.5	8294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATTTTGTCATTTAAG	139013370	True	NA	32	True	AATAAA	-23	NA	139028744	139043302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_139028876_139034154_139034222_139042718
transcript_125787.known	chr6	-	2382	2	FSM	ENSG00000164442.10	ENST00000367651.4	2382	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAGTGATGAGAGTTTT	-139371508	True	NA	NA	False	ATTAAA	-17	NA	139374648	139371806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139373953_139374412
transcript_125788.known	chr6	-	1274	4	FSM	ENSG00000238099.3	ENST00000655740.1	1274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCTATTTTACTTAG	-139473430	False	NA	NA	False	AATAAA	-21	NA	139473444	139456894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139457858_139472526_139472596_139472931_139473056_139473326
transcript_125789.known	chr6	-	1249	4	FSM	ENSG00000238099.3	ENST00000654256.1	1249	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCCTATTTTACTTAG	-139474644	False	NA	NA	False	AATAAA	-21	NA	139474658	139456894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139457858_139472526_139472596_139472931_139473056_139474565
transcript_125790.known	chr6	-	1780	4	FSM	ENSG00000238099.3	ENST00000665194.1	1780	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTATGGAATTTCTGACT	-139473442	False	NA	NA	False	AATAAA	-31	NA	139473456	139469003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139470461_139472526_139472596_139472931_139473056_139473326
transcript_125791.known	chr6	-	1732	4	FSM	ENSG00000238099.3	ENST00000454788.3	1732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCTGACTCCGAAGAAT	-139474624	False	NA	NA	False	AATAAA	-40	NA	139474638	139468994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_139470461_139472526_139472596_139472931_139473056_139474565
transcript_125792.known	chr6	-	592	4	FSM	ENSG00000234147.3	ENST00000682608.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	-140898401	True	NA	NA	False	CATAAA	-18	NA	140898424	140845957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140852818_140852913_140898187_140898291_140898376
transcript_125793.known	chr6	-	665	3	FSM	ENSG00000234147.3	ENST00000683841.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	-140898388	True	NA	NA	False	CATAAA	-18	NA	140898411	140845957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140852818_140852913_140898187
transcript_125794.known	chr6	-	493	3	FSM	ENSG00000234147.3	ENST00000682812.1	493	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	-140898396	True	NA	NA	False	CATAAA	-18	NA	140898419	140845957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140898187_140898291_140898376
transcript_125795.known	chr6	-	503	3	FSM	ENSG00000234147.3	ENST00000682196.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	-140898410	False	NA	NA	False	CATAAA	-18	NA	140898433	140845957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140898187_140898291_140898380
transcript_125796.known	chr6	-	608	2	FSM	ENSG00000234147.3	ENST00000683641.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTGAATTGTTTTTT	NA	False	NA	NA	False	CATAAA	-18	NA	140898448	140845957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140846305_140898187
transcript_125797.known	chr6	-	224	3	FSM	ENSG00000234147.3	ENST00000684120.1	224	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAGCCCCATGGGAGA	-140898394	True	NA	NA	False	NA	NA	NA	140898417	140895644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_140895729_140898187_140898291_140898380
transcript_125798.nnic	chr6	+	773	3	Antisense	novelGene_ENSG00000222764.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAACTTGATATCTGTA	141453037	True	NA	NA	False	AATAAA	-19	NA	141453106	141487932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_+_141453373_141455180_141455362_141487606
transcript_1258.known	chr1	-	1779	5	FSM	ENSG00000198912.12	ENST00000680054.1	1779	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	147.887414947993	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-3896637	True	NA	-43	True	AATACA	-14	NA	3900272	3889152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3890074_3890568_3891058_3891625_3891780_3892882_3892997_3900171
transcript_125804.known	chr6	+	1284	7	FSM	ENSG00000009844.16	ENST00000367621.1	1284	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	445.925784806794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAAATTAGAAATTACGT	142137794	True	NA	3	True	AATAAA	-14	NA	142147256	142219067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_142147400_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_125807.known	chr6	+	6991	8	FSM	ENSG00000009844.16	ENST00000367630.9	6991	8	0	0	0	0	multi-exon	FALSE	canonical	3	1128	junction_3	75.4869903644708	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGTTCTATTATATCAT	142137800	True	NA	NA	False	AATAAA	-16	NA	142147262	142224685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_142147400_142166227_142166323_142169549_142169678_142170345_142170422_142189425_142189535_142198438_142198616_142203984_142204066_142218497
transcript_12581.nic	chr1	+	614	5	ISM	ENSG00000143228.13	ENST00000497990.1	885	11	-152	16727	4	430	5prime_fragment	FALSE	canonical	3	126	junction_1	63.6410834288669	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGAAAAAAACAACTTCAA	NA	False	NA	NA	False	AGTAAA	-17	NA	163321893	163328991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227_163328305_163328845
transcript_125818.nnic	chr6	+	1499	7	NNC	ENSG00000146416.19	novel	1202	7	NA	NA	-12	14	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_5	80.3604725941526	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	143059963	False	NA	5	True	AATAAA	-18	NA	143060840	143340304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143335050_143335120_143339638
transcript_125827.known	chr6	+	2136	6	FSM	ENSG00000146416.19	ENST00000357847.9	2136	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_5	23.3888862496699	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCGTCTCTCTGTCTCTC	143058864	True	NA	NA	False	ATTAAA	-19	NA	143060888	143341058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143339638
transcript_125844.nnic	chr6	+	1314	5	NIC	ENSG00000146416.19	novel	2136	6	NA	NA	-12	14	combination_of_known_splicesites	FALSE	canonical	2	6	junction_3	83.429611050274	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGACGTCTGCATTGTGCA	143059963	False	NA	5	True	AATAAA	-18	NA	143060840	143340304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_143061067_143136834_143136991_143165081_143165184_143333281_143333446_143339638
transcript_125852.known	chr6	+	3393	4	FSM	ENSG00000146416.19	ENST00000494282.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_3	88.1400400877301	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATTCAGTGTCCTGGCA	143058876	True	NA	NA	False	AATAAA	-26	NA	143060900	143190597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143187628
transcript_125857.nnic	chr6	+	833	3	NNC	ENSG00000146416.19	novel	559	2	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	69	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	NA	False	NA	22	True	AATAAA	-27	NA	143060417	143061606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_143060738_143060946_143061067_143061213
transcript_125858.nic	chr6	+	744	3	NIC	ENSG00000146416.19	novel	559	2	NA	NA	-73	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	74.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	NA	False	NA	22	True	AATAAA	-27	NA	143060422	143061606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_143060654_143060946_143061067_143061213
transcript_125861.known	chr6	+	559	2	FSM	ENSG00000146416.19	ENST00000367596.5	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCCATTGTCAATAATTTA	143058876	True	NA	22	True	AATAAA	-27	NA	143060900	143061606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143061213
transcript_125862.known	chr6	+	3064	6	FSM	ENSG00000146416.19	ENST00000646199.1	3064	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	78.0497277381542	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCACCCTGAACCTGAC	143059976	False	NA	-9	True	AATAAA	-4	NA	143060853	143340290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143337977
transcript_125863.nnic	chr6	+	1755	6	Fusion	ENSG00000217648.1_ENSG00000146416.19	novel	3064	6	NA	NA	3	233	multi-exon	FALSE	canonical	2	3	junction_5	77.6608009229882	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTCCTTTTACCTTGCA	143058867	True	NA	-7	True	AATAAA	-17	NA	143060891	143343616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_143061067_143136834_143136991_143165081_143165184_143284109_143284226_143333281_143333446_143342574
transcript_125878.known	chr6	-	6244	6	FSM	ENSG00000189007.16	ENST00000237283.9	6244	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	34.7701020993612	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATGTTTAAAATATTATTT	-143448287	True	NA	-13	True	AATAAA	-23	NA	143450695	143422831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_143428507_143428611_143428685_143432504_143432612_143433830_143433982_143438589_143438695_143450562
transcript_125887.nic	chr6	-	698	3	ISM	ENSG00000189007.16	ENST00000237283.9	6244	6	-161	10851	-161	-10851	5prime_fragment	FALSE	canonical	3	82	junction_2	8	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTTTAAATAGTAAAATG	NA	False	NA	NA	False	AATATA	-27	NA	143450856	143433682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_143433982_143438589_143438695_143450562
transcript_125892.known	chr6	+	2750	12	FSM	ENSG00000034693.15	ENST00000367591.5	2750	12	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_11	33.5352287937317	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGAATGGATTGGAATT	143449573	True	NA	NA	False	AATAAA	-20	NA	143450804	143490616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143451116_143459084_143459217_143462915_143462998_143468121_143468166_143470960_143471086_143471382_143471450_143471556_143471612_143472159_143472329_143474785_143474857_143479075_143479199_143485151_143485249_143489142
transcript_12590.known	chr1	+	779	4	FSM	ENSG00000143228.13	ENST00000487578.2	779	4	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	56.5685424949238	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTTTGAGTTCTTAAAA	163317377	True	NA	NA	False	NA	NA	NA	163321985	163328561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_163322213_163326031_163326175_163327487_163327563_163328227
transcript_125906.known	chr6	-	2385	7	FSM	ENSG00000001036.14	ENST00000002165.11	2385	7	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_3	61.3124964605277	775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATATTTTCTTTCTTC	-143506188	True	NA	NA	False	CATAAA	-18	NA	143511720	143494811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_143495848_143497388_143497498_143501931_143502123_143502354_143502566_143503912_143504253_143507236_143507425_143511410
transcript_12591.nic	chr1	+	1157	4	ISM	ENSG00000143228.13	ENST00000497990.1	885	11	-152	16725	4	432	intron_retention	FALSE	canonical	3	126	junction_1	73.0677007226099	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAACAACTTCAAGG	NA	False	NA	NA	False	AGTAAA	-19	NA	163321893	163328993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_163322067_163326031_163326175_163327487_163327563_163328227
transcript_125916.known	chr6	+	4367	12	FSM	ENSG00000112419.15	ENST00000367582.7	4367	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	50.4850849425144	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATTTTGCAGAATATG	143665870	True	NA	NA	False	ATTAAA	-15	NA	143677982	143826177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_125920.nic	chr6	+	1604	8	ISM	ENSG00000112419.15	ENST00000367582.7	4367	12	-18	48794	0	11718	5prime_fragment	FALSE	canonical	3	115	junction_4	29.0460577254084	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTATTCTATACTATAG	143665852	True	NA	15	True	AAGAAA	-12	NA	143677964	143777383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143765260_143765799_143772257_143772458_143774058_143774216_143777327
transcript_125921.known	chr6	+	745	5	FSM	ENSG00000112419.15	ENST00000397980.3	745	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	81.3464811777375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAACAGACCTTGATG	143665955	True	NA	NA	False	AATAAA	-25	NA	143678067	143755499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143755304
transcript_125922.nnic	chr6	+	807	5	NNC	ENSG00000112419.15	novel	745	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	81.7782825693961	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACCAACAGACCTTGATG	143665852	True	NA	NA	False	AATAAA	-25	NA	143677964	143755499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143755345
transcript_125923.known	chr6	+	825	4	FSM	ENSG00000112419.15	ENST00000402863.3	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	7.03957069398096	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATTAAAAGTAATAATC	143665906	True	NA	NA	False	ATTAAA	-4	NA	143678018	143754138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753
transcript_125925.known	chr6	+	358	2	FSM	ENSG00000112419.15	ENST00000545919.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTAAGAGTTCTGATTTG	143666060	False	NA	NA	False	AATAAA	-14	NA	143678172	143712336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015
transcript_125926.known	chr6	+	2569	13	FSM	ENSG00000112419.15	ENST00000440869.7	9633	13	0	7064	0	-43	multi-exon	FALSE	canonical	0	0	junction_11	66.2547168132202	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAGAAAATTGAA	143665852	True	NA	NA	False	AAGAAA	-24	NA	143677964	143824121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143678210_143712015_143712184_143748984_143749066_143753753_143753913_143760400_143760641_143765260_143765799_143772257_143772458_143774058_143774216_143777327_143777384_143783218_143783281_143788772_143788911_143807056_143807134_143823673
transcript_125929.known	chr6	+	1853	11	FSM	ENSG00000135521.9	ENST00000367576.6	1853	11	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_6	27.2838780234775	2128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAATTGGTGTATTCATTT	143839225	True	NA	12	True	ATTAAA	-24	NA	143843337	143863812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_143843481_143844485_143844618_143846050_143846225_143850130_143850219_143857302_143857445_143857751_143858008_143860425_143860554_143862103_143862244_143862843_143862897_143863085_143863287_143863416
transcript_125959.known	chr6	-	690	1	FSM	ENSG00000169976.7	ENST00000367569.4	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12701	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGGTGTGAACTTTC	-144077215	True	NA	-7	True	CATAAA	-17	NA	144095573	144094883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_144094900_144095600
transcript_125963.nic	chr6	+	1023	2	ISM	ENSG00000152818.19	ENST00000433557.1	354	3	-439	110985	-73	-110985	5prime_fragment	FALSE	canonical	3	51	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTATTTTCTGGAA	144285223	False	NA	NA	False	AATAAA	-16	NA	144285261	144292199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_144285822_144291736
transcript_125964.known	chr6	-	2118	5	FSM	ENSG00000112425.16	ENST00000638717.1	2118	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.256095748383	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAAGCAAGACATTCT	-145735237	False	210	NA	False	NA	NA	NA	145735281	145382534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_145384098_145502521_145502576_145635244_145635487_145686121_145686297_145735197
transcript_125966.known	chr6	+	1649	1	FSM	ENSG00000270638.1	ENST00000603994.1	1649	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATTGTTTCCTTTACT	145735551	False	NA	NA	False	ATTAAA	-17	NA	145735569	145737218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_145735600_145737200
transcript_12597.known	chr1	-	574	2	FSM	ENSG00000232995.7	ENST00000528818.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAATGAAATGTACTTCC	-163321113	True	NA	NA	False	NA	NA	NA	163321741	163318837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_163319292_163321621
transcript_125974.nic	chr6	-	1844	10	NIC	ENSG00000146414.17	novel	5245	24	NA	NA	-13	1944	combination_of_known_junctions	FALSE	canonical	2	17	junction_8	15.3911951741536	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCATTTATCAATCCC	-145964067	False	NA	NA	False	AGTAAA	-41	NA	145964110	145943615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145963730
transcript_125975.nic	chr6	-	1828	10	ISM	ENSG00000146414.17	ENST00000519632.5	5245	24	-97	26503	-97	1944	5prime_fragment	FALSE	canonical	2	17	junction_8	13.9079868696168	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCATTTATCAATCCC	NA	False	NA	NA	False	AGTAAA	-41	NA	145964520	145943615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145954854_145955186_145955355_145964156
transcript_125976.known	chr6	-	7596	30	FSM	ENSG00000146414.17	ENST00000275233.12	7596	30	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_29	15.316013240832	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGAATTCTTTGATTTC	-145963346	True	NA	NA	False	AATAAA	-21	NA	145964358	145884806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_145886788_145888019_145888101_145893214_145893394_145894149_145894237_145894884_145894978_145910447_145910637_145913477_145913550_145918130_145918233_145919347_145919492_145921166_145921393_145922285_145922349_145922662_145922837_145923642_145923786_145924738_145924847_145926203_145926297_145927188_145927278_145933056_145933179_145934906_145935164_145935277_145935442_145940722_145940802_145941622_145941875_145943142_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145963730
transcript_125977.nic	chr6	-	2161	9	ISM	ENSG00000146414.17	ENST00000367505.6	7201	30	-131	58809	-97	1944	5prime_fragment	FALSE	canonical	3	43	junction_8	9.02773504263389	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAACCATTTATCAATCCC	NA	False	NA	NA	False	AGTAAA	-41	NA	145964520	145943615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_145943803_145945380_145945638_145946232_145946342_145947492_145947644_145948271_145948351_145950263_145950483_145952348_145952479_145954689_145955355_145964156
transcript_125993.known	chr6	+	2881	3	FSM	ENSG00000235652.10	ENST00000658327.1	2881	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAAAGTTGGAAATAA	145814834	True	NA	NA	False	NA	NA	NA	145814894	145873177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_145815432_145828360_145828457_145870929
transcript_125994.known	chr6	-	9051	3	FSM	ENSG00000118496.5	ENST00000237281.5	9051	3	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	1.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTTATGCTTTTGTATT	-145810104	True	NA	NA	False	AATAAA	-16	NA	145814795	145793501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_145800310_145804371_145806422_145814602
transcript_125999.known	chr6	+	1065	3	FSM	ENSG00000118508.5	ENST00000367495.4	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTATGGTCATTTTGAGT	146543548	True	NA	6	True	AATAAA	-13	NA	146543832	146554953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_146544122_146549463_146549742_146554455
transcript_12600.known	chr1	+	598	1	FSM	ENSG00000213070.3	ENST00000444896.1	598	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	366	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAAGAAACTGTTTATC	NA	False	NA	NA	False	NA	NA	NA	164356766	164357364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164356800_164357400
transcript_126001.known	chr6	+	9177	26	FSM	ENSG00000164506.15	ENST00000367481.7	9177	26	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_19	7.25468124730508	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTTTTCCTGGAAAATT	147204412	False	NA	NA	False	AATAAA	-30	NA	147204424	147390476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_147204683_147205970_147206069_147235249_147235332_147239169_147239271_147260614_147260750_147262289_147262354_147267083_147267168_147278080_147278205_147291093_147291173_147310083_147310239_147311454_147311528_147313883_147314032_147314263_147314332_147314595_147314637_147315514_147315736_147316228_147316408_147324958_147325085_147327124_147327277_147334156_147334223_147353322_147353374_147359083_147359324_147363334_147363705_147364000_147364167_147373730_147373843_147382777_147382999_147384713
transcript_126004.known	chr6	+	406	3	FSM	ENSG00000227681.5	ENST00000432506.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTTGTTTCAGTACATA	147660717	False	NA	21	True	AATAAA	-37	NA	147660736	147737556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_147660820_147733728_147733812_147737316
transcript_126012.nnic	chr6	-	510	3	Antisense	novelGene_ENSG00000111962.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTATTTTGGGGTCTC	-148747623	True	NA	NA	False	AATAAA	-18	NA	148747642	148735870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr6_-_148736064_148746579_148746641_148747386
transcript_126014.known	chr6	+	466	3	FSM	ENSG00000228408.6	ENST00000443992.1	466	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTGGTCTGATGCATT	NA	False	NA	NA	False	ATTAAA	-11	NA	149218000	149230159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149218085_149218622_149218777_149229931
transcript_126018.known	chr6	-	2475	13	FSM	ENSG00000131013.4	ENST00000253329.3	2475	13	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_6	27.147232312378	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTAGTTTTTTTTTC	-149538772	True	NA	NA	False	NA	NA	NA	149546043	149504494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149505705_149512154_149512303_149517353_149517451_149521059_149521172_149525142_149525210_149526651_149526777_149533457_149533575_149534677_149534775_149535595_149535739_149540941_149541060_149541366_149541432_149541518_149541587_149545935
transcript_12602.known	chr1	+	1459	8	FSM	ENSG00000185630.19	ENST00000367897.5	1459	8	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	27.7532862551299	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGACTCCCGGGGTCCCCG	164559790	False	NA	-93	True	NA	NA	NA	164559822	164846955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164560014_164563237_164563312_164792493_164792739_164799698_164799890_164807541_164807678_164811989_164812150_164821536_164821627_164846583
transcript_126021.known	chr6	+	1943	8	FSM	ENSG00000055211.14	ENST00000367419.10	1943	8	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_7	3.61403161162101	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAGCTGTTTTGGTTACA	149564253	True	NA	29	True	AATAAA	-29	NA	149566374	149591748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149566535_149572284_149572345_149572506_149572604_149578821_149578974_149579833_149579991_149580592_149580724_149582439_149582604_149590726
transcript_126032.known	chr6	-	1898	11	FSM	ENSG00000186625.14	ENST00000367411.7	1898	11	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	17.4802745973855	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	-149645755	True	NA	0	True	AATAAA	-23	NA	149648714	149594872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149601593_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_126038.nnic	chr6	-	1811	10	NIC	ENSG00000186625.14	novel	1898	11	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_4	57.340654140705	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTTACTTTAGCATTA	NA	False	NA	0	True	AATAAA	-23	NA	149648786	149594872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_149595235_149597062_149597190_149597506_149597642_149598223_149598351_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_12605.known	chr1	+	834	3	FSM	ENSG00000185630.19	ENST00000485769.5	834	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGAAAGCAGAATTGTCAA	164559114	False	NA	NA	False	AAAAAG	-5	NA	164559199	164560357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_164559530_164559721_164560014_164560145
transcript_126057.known	chr6	-	1138	7	FSM	ENSG00000186625.14	ENST00000444282.5	1138	7	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	9.4457515435365	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAGAGGAGAATCTGAGA	-149645792	True	NA	NA	False	NA	NA	NA	149648751	149601639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149601753_149603267_149603374_149604660_149604783_149623102_149623284_149632758_149632917_149638385_149638561_149648468
transcript_126060.known	chr6	+	460	1	FSM	ENSG00000220848.5	ENST00000482817.1	460	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	NA	NA	NA	149594083	149594543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149594100_149594500
transcript_126061.known	chr6	-	2567	4	FSM	ENSG00000131023.13	ENST00000392273.7	2567	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	10.2740233382816	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAGCATTTTATTTTAGT	-149713907	True	NA	-12	True	AATAAA	-18	NA	149718105	149682918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149684593_149695073_149695222_149701778_149702267_149717848
transcript_126064.nic	chr6	-	1871	2	ISM	ENSG00000131023.13	ENST00000542720.1	1096	5	-78	16246	-1	-16246	5prime_fragment	FALSE	canonical	3	104	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTCACTGTTTGTTTTT	-149713904	True	NA	NA	False	TATAAA	-18	NA	149718102	149700649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_149702267_149717848
transcript_126082.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000367380.9	1628	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	762.333132925203	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149749957_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_126094.known	chr6	-	904	5	FSM	ENSG00000203722.8	ENST00000367361.6	904	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGTTCCCTGGGCCCAGCT	-149922986	False	NA	NA	False	NA	NA	NA	149923010	149916912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149917075_149918173_149918285_149919042_149919325_149919552_149919817_149922925
transcript_126095.known	chr6	-	1150	5	FSM	ENSG00000203722.8	ENST00000367360.7	1150	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTCTTGTGTCTTTAT	-149923097	True	NA	NA	False	NA	NA	NA	149923121	149916877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149917075_149918173_149918385_149919042_149919325_149919552_149919817_149922925
transcript_126097.known	chr6	-	3831	8	FSM	ENSG00000120253.14	ENST00000340413.7	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_6	18.9208879284245	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTCTATCTGTCTTAT	-149735792	True	NA	-1	True	AATAAA	-26	NA	149746529	149724314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149727199_149731612_149731736_149736470_149736623_149738642_149738779_149742389_149742571_149743637_149743716_149745939_149746063_149746375
transcript_126098.known	chr6	+	1628	7	FSM	ENSG00000120265.19	ENST00000544496.5	1628	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	749.536449339783	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTGTTTTTGAATATA	149749650	False	NA	NA	False	AATAAA	-19	NA	149749694	149811420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_126099.known	chr6	+	1686	8	FSM	ENSG00000120265.19	ENST00000464889.7	1686	8	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_7	502.892165988142	1810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTTTTTGAATAT	149734563	True	NA	NA	False	AATAAA	-18	NA	149749740	149811419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149749957_149771161_149771267_149773137_149773170_149789953_149790059_149793548_149793670_149796414_149796501_149802199_149802417_149810615
transcript_126100.known	chr6	+	377	2	FSM	ENSG00000120265.19	ENST00000480010.1	377	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTTTGTGAATTGATTT	149809995	False	NA	21	True	ATTAAA	-26	NA	149810039	149810908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149810124_149810615
transcript_126101.known	chr6	+	312	2	FSM	ENSG00000273132.1	ENST00000472053.2	312	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCTTATTTTTTCTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	149852461	149853192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149852565_149852983
transcript_126102.known	chr6	+	1335	5	FSM	ENSG00000131015.5	ENST00000367351.4	1335	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACGGTGTTTAGAATTTT	149942000	True	NA	NA	False	AATAAA	-20	NA	149942013	149949235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149942158_149945308_149945573_149946371_149946654_149947319_149947452_149948722
transcript_126103.known	chr6	+	3211	5	FSM	ENSG00000111981.5	ENST00000229708.4	3211	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.48746859276655	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGTTCCATCTTGTTCT	149963825	True	NA	NA	False	ATTAAA	-21	NA	149963942	149973715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_149964135_149968606_149968871_149969084_149969361_149970015_149970148_149971368
transcript_126104.known	chr6	-	1883	4	FSM	ENSG00000218358.3	ENST00000533735.2	1905	4	22	0	13	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTATTGACTTTGGAATTT	-150005073	False	NA	NA	False	AATAAA	-20	NA	150005144	149998018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_149998885_150000065_150000195_150000852_150001669_150005072
transcript_126107.nic	chr6	+	889	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	152.333951084652	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150866091	True	NA	34	True	ATTAAA	-40	NA	150866464	150899021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887841_150887982_150898859
transcript_126108.nic	chr6	+	886	8	NIC	ENSG00000120254.16	novel	524	7	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	155.228731823955	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATCTGTCATGACTTTTT	150866091	True	NA	34	True	ATTAAA	-40	NA	150866464	150899021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_150866636_150876089_150876175_150877633_150877685_150877772_150877827_150882761_150882887_150885633_150885735_150887844_150887982_150898859
transcript_126112.known	chr6	+	405	1	FSM	ENSG00000219747.1	ENST00000405720.1	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCGTGTGCACATTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	151099528	151099933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151099500_151099900
transcript_126115.nic	chr6	+	3177	2	ISM	ENSG00000131016.17	ENST00000359755.5	6190	3	9937	0	9921	0	3prime_fragment	FALSE	canonical	3	458	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGCTGGTTTTATTAG	151351605	False	NA	15	True	AATAAA	-16	NA	151351622	151356773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_151353753_151355726
transcript_126116.known	chr6	+	8466	5	FSM	ENSG00000131016.17	ENST00000402676.7	8466	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	164.229260486675	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACTGTGATTCAGTTTC	151239905	True	NA	39	True	AATAAA	-40	NA	151239966	151358559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151240060_151240383_151240725_151305746_151305904_151348710_151353753_151355726
transcript_126118.known	chr6	-	3103	3	FSM	ENSG00000181472.5	ENST00000325144.5	3103	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	8.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTCATGTCATCTCT	-151390468	True	NA	-9	True	AATAAA	-19	NA	151391559	151364114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151366893_151373464_151373650_151391419
transcript_12612.known	chr1	+	680	7	FSM	ENSG00000143198.13	ENST00000367885.5	680	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	768.979283783958	2293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610113	True	NA	35	True	AATAAA	-32	NA	165631239	165655620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_126120.known	chr6	-	1914	13	FSM	ENSG00000155906.20	ENST00000644711.1	1914	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	65.9587413126991	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TACTAAAAATACCAAAATTA	-151448722	True	NA	NA	False	NA	NA	NA	151452125	151405052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151408642_151408901_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_126122.known	chr6	-	1881	13	FSM	ENSG00000155906.20	ENST00000682392.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	65.2444122767102	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGACTCAGTCTCAA	-151448743	True	NA	-70	True	NA	NA	NA	151452146	151404906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417080_151417139_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_126123.known	chr6	-	1871	13	FSM	ENSG00000155906.20	ENST00000684765.1	1871	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	62.7581336030106	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAGACTCAGTCTCAAA	-151448743	True	NA	-69	True	NA	NA	NA	151452146	151404905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151418532_151418580_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_126126.known	chr6	-	1948	12	FSM	ENSG00000155906.20	ENST00000444024.3	1948	12	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_8	19.3382248965297	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTATCTACATCACT	-151448723	True	NA	-14	True	AATAAA	-16	NA	151452126	151404761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_126131.known	chr6	-	1340	11	FSM	ENSG00000155906.20	ENST00000622845.5	1340	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	47.5936970616909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAACAATAAAATAAATAAA	-151448755	True	NA	-47	True	NA	NA	NA	151452158	151404883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436445_151436555_151452015
transcript_126133.nic	chr6	-	1435	11	NIC	ENSG00000155906.20	novel	1413	11	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_9	63.5758601986635	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	NA	False	NA	-17	True	AATAAA	-27	NA	151452197	151404853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151436419_151436555_151452015
transcript_126137.nnic	chr6	-	1279	10	NIC	ENSG00000155906.20	novel	1340	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	56.444225721361	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGGGTGATCATTTAAT	-151448773	True	NA	-17	True	AATAAA	-27	NA	151452176	151404853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_151405268_151405719_151405837_151417278_151417400_151421244_151421322_151422540_151422606_151423524_151423632_151427481_151427583_151430137_151430178_151433154_151433231_151452015
transcript_12614.known	chr1	+	716	7	FSM	ENSG00000143198.13	ENST00000367884.6	716	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	774.582772996032	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610128	True	NA	35	True	AATAAA	-32	NA	165631254	165655620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631293_165635726_165635823_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_126148.known	chr6	-	1229	5	FSM	ENSG00000155906.20	ENST00000683740.1	1229	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	11.7765657133139	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTCATGGGAAATAATTT	-151448743	True	NA	NA	False	NA	NA	NA	151452146	151429782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151430178_151433154_151433231_151436445_151436555_151445307_151445826_151452015
transcript_126151.known	chr6	-	841	3	FSM	ENSG00000155906.20	ENST00000491268.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	6.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATTTATAGGATCATTA	-151448615	False	NA	NA	False	ATTAAA	-44	NA	151452018	151436234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151436555_151445307_151445826_151452015
transcript_126153.known	chr6	-	915	2	FSM	ENSG00000155906.20	ENST00000643564.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAATTCTTCATCAAGT	-151448671	True	NA	NA	False	AATAAA	-16	NA	151452074	151444969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_151445826_151452015
transcript_126158.known	chr6	+	2397	5	FSM	ENSG00000146476.11	ENST00000367294.4	2397	5	0	0	0	0	multi-exon	FALSE	canonical	3	820	junction_4	36.503424496888	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGTTTTATTTTCT	151445292	True	NA	9	True	AATAAA	-18	NA	151452465	151470101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452_151464619_151468342
transcript_12616.known	chr1	+	706	7	FSM	ENSG00000143198.13	ENST00000367883.3	706	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	768.979283783958	2168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTCTTACCACTCA	165610936	False	NA	35	True	AATAAA	-32	NA	165632062	165655620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165632143_165632230_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_126161.nic	chr6	+	891	4	ISM	ENSG00000146476.11	ENST00000367294.4	2397	5	-181	5411	27	124	5prime_fragment	FALSE	canonical	3	827	junction_2	33.6881119816604	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAAATATTTTTCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	151452284	151464690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_151452587_151454547_151454654_151458327_151458573_151464452
transcript_126162.known	chr6	+	712	4	FSM	ENSG00000146476.11	ENST00000494826.1	712	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	401.63360859813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTGGATTTGAGCTTG	151445312	True	NA	NA	False	AAAAAG	-32	NA	151452485	151468542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151452587_151458327_151458573_151464452_151464619_151468342
transcript_126164.known	chr6	+	530	2	FSM	ENSG00000091831.25	ENST00000488573.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTCACAATGAAGGAA	151808012	False	NA	NA	False	TATAAA	-41	NA	151808104	151811278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_151808365_151811008
transcript_126165.known	chr6	-	647	4	FSM	ENSG00000131018.25	ENST00000537033.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCTCTACGAAGATGGAG	-152301992	True	NA	NA	False	NA	NA	NA	152302136	152293679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152293750_152293959_152294128_152300640_152300782_152301868
transcript_126166.nic	chr6	-	986	3	ISM	ENSG00000131018.25	ENST00000540663.5	776	4	-30	9235	-17	463	5prime_fragment	FALSE	canonical	2	5	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTCTCGATATTGTTGT	-152302009	True	NA	NA	False	AATAAA	-17	NA	152302153	152293216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_152293750_152293959_152294128_152301868
transcript_126167.nnic	chr6	+	996	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14617	-703	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTGGATTACAATC	152682745	True	NA	NA	False	ATTAAA	-13	NA	152683279	152722581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_152683436_152721741
transcript_126168.nnic	chr6	+	1054	2	NNC	ENSG00000120279.7	novel	3030	2	NA	NA	-14617	-645	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	0	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGTCACTTTAAAGA	152682745	True	NA	NA	False	AAAAAG	-11	NA	152683279	152722639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_152683436_152721741
transcript_126170.known	chr6	-	3700	7	FSM	ENSG00000112031.16	ENST00000367233.10	3700	7	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	32.8722273862501	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997253	True	NA	-107	True	AATAAA	-33	NA	153002709	152987361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995320_152998549_152998630_153002426
transcript_126172.known	chr6	-	3651	7	FSM	ENSG00000112031.16	ENST00000464135.5	3651	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_5	50.261538199922	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTGTATCCAGCATCAT	-152997229	True	NA	-107	True	AATAAA	-33	NA	153002685	152987361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152990096_152991184_152991322_152992856_152992975_152994512_152994677_152995135_152995295_152998549_152998630_153002426
transcript_126174.known	chr6	-	2054	5	FSM	ENSG00000112029.10	ENST00000229758.8	2054	5	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_4	9.97496867163	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAAGCTTAATGTATACC	-152978202	True	NA	-17	True	AATAAA	-16	NA	152983041	152970534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152982856
transcript_126175.known	chr6	-	2221	5	FSM	ENSG00000112029.10	ENST00000367241.3	2221	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	125.874937934443	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAATGTATACCTTTTAT	-152982803	True	NA	-11	True	AATAAA	-22	NA	152983579	152970528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152971415_152972271_152972455_152973045_152973137_152974906_152975622_152983233
transcript_126179.known	chr6	+	2090	3	FSM	ENSG00000227627.4	ENST00000637995.1	2090	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCGCGGTGGCTCACA	152983143	True	NA	NA	False	ATTAAA	-6	NA	152983330	152990541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_152983488_152987955_152988023_152988675
transcript_126181.known	chr6	+	3246	3	FSM	ENSG00000227627.4	ENST00000671635.1	3246	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGTTACGAGAATT	152983482	True	NA	NA	False	NA	NA	NA	152983718	152991322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_152984251_152987955_152988023_152988675
transcript_126182.known	chr6	+	1478	3	FSM	ENSG00000227627.4	ENST00000654706.2	1512	3	33	1	7	-1	multi-exon	FALSE	canonical	3	8	junction_1	1.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGCGTCTTGTTTATTCT	152983489	True	NA	3	True	CATAAA	-14	NA	152983725	152990006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_152983806_152987955_152988023_152988675
transcript_126185.known	chr6	-	447	2	FSM	ENSG00000112031.16	ENST00000482526.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGGTCCTGTTTTC	-152997080	False	NA	NA	False	AATAAA	-20	NA	153002536	152998292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_152998630_153002426
transcript_126188.nnic	chr6	-	1603	5	NNC	ENSG00000091844.8	novel	7932	5	NA	NA	-15	-6429	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	20.0312256240101	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGGGAAGAAGGAAAAAA	-153129495	True	NA	NA	False	AAAACA	-11	NA	153131297	153010887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131038
transcript_126189.known	chr6	-	7932	5	FSM	ENSG00000091844.8	ENST00000206262.2	7932	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	4.82182538049648	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAGAAAGTTACTGTTT	-153129480	True	NA	-7	True	AATAAA	-16	NA	153131282	153004458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_153011763_153024261_153024497_153026453_153026544_153043899_153044044_153131123
transcript_126191.nnic	chr6	-	607	4	NNC	ENSG00000091844.8	novel	7773	4	NA	NA	-72	-20542	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	18.8325958557674	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGACAAGTGCACACAGTG	NA	False	NA	-12	True	ATTAAA	-14	NA	153131354	153025000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_153025143_153026453_153026544_153043899_153044044_153131123
transcript_126196.known	chr6	-	447	1	FSM	ENSG00000218426.5	ENST00000492974.2	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23807	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCGCATGGAGGGAGTTTC	-153279188	False	NA	-51	True	NA	NA	NA	153282733	153282286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_153282300_153282700
transcript_1262.known	chr1	-	1753	4	FSM	ENSG00000198912.12	ENST00000681823.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.141379081008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-3896623	True	NA	-43	True	AATACA	-14	NA	3900258	3889152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3890074_3890568_3891058_3892740_3892997_3900171
transcript_126203.nic	chr6	-	1141	7	NIC	ENSG00000029639.11	novel	2799	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	185.921130231791	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCTTTTAATATATACT	-155311179	True	NA	NA	False	AATAAA	-26	NA	155314519	155257652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_-_155257909_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_126208.known	chr6	-	2799	7	FSM	ENSG00000029639.11	ENST00000367166.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_4	34.6217657935968	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTGCTTTGTAATTTG	-155311144	True	NA	-8	True	AATAAA	-20	NA	155314484	155256133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_155258083_155260272_155260401_155285157_155285278_155296952_155297105_155298476_155298586_155311187_155311340_155314295
transcript_12622.known	chr1	+	1158	6	FSM	ENSG00000143198.13	ENST00000367889.8	1158	6	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	181.666287461378	12325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCTGTTGCTTAAA	165610107	True	NA	NA	False	AATAAA	-23	NA	165631233	165656136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_126232.nnic	chr6	-	672	4	NNC	ENSG00000029639.11	novel	2799	7	NA	NA	-13	10	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	252.948391749955	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGTACAAGCTTTCTTTT	-155311166	True	NA	NA	False	AATAAA	-16	NA	155314506	155257662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_155257909_155298522_155298586_155311187_155311340_155314295
transcript_126238.known	chr6	-	433	3	FSM	ENSG00000029639.11	ENST00000470239.1	433	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	281.5	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAATAAGATACAGTACAA	-155311144	True	NA	NA	False	AATAAA	-6	NA	155314484	155257672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_155257909_155311331_155311340_155314295
transcript_126240.known	chr6	-	129	1	FSM	ENSG00000270487.1	ENST00000604792.1	129	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACTGGTCTGCTATCT	-156780439	True	NA	NA	False	AATAAA	-35	NA	156780455	156780326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_156780300_156780500
transcript_126241.known	chr6	+	378	2	FSM	ENSG00000218596.2	ENST00000406202.2	378	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATTTACA	NA	False	NA	NA	False	AAAACA	-35	NA	156976293	156977072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_156976414_156976814
transcript_126248.known	chr6	+	939	4	FSM	ENSG00000078269.15	ENST00000367113.5	939	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	28.4057897071863	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGATCTCATTAAAAATG	157981310	False	NA	NA	False	AATAAA	-36	NA	157982037	158030937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_157982089_158017203_158017291_158028755_158029027_158030407
transcript_126251.known	chr6	-	3936	17	FSM	ENSG00000122335.17	ENST00000647468.2	3936	17	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	8.26490131520032	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTTTCATTGTACAA	-158166688	True	NA	-18	True	AATAAA	-15	NA	158168262	158109518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_126254.known	chr6	-	2729	16	FSM	ENSG00000122335.17	ENST00000642244.1	2729	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	23.3964859659641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGCAATTCTTAGTATCAA	-158166672	True	NA	NA	False	AGTAAA	-24	NA	158168246	158110619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158111503_158113448_158113593_158114788_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_126256.known	chr6	-	2022	15	FSM	ENSG00000122335.17	ENST00000642903.1	2022	15	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	6.50274667242345	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGCATTGTAATAATT	-158166706	True	NA	NA	False	NA	NA	NA	158168280	158114592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158114972_158116184_158116283_158117726_158117822_158119028_158119171_158120424_158120576_158128107_158128271_158130372_158130487_158143055_158143185_158144298_158144421_158146781_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_12626.known	chr1	+	720	6	FSM	ENSG00000143198.13	ENST00000495447.5	720	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	656.559700255811	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCCTGACTCTTACCAC	165610112	True	NA	32	True	AATAAA	-29	NA	165631238	165655617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165649754_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_126262.nic	chr6	-	1011	6	ISM	ENSG00000122335.17	ENST00000367101.5	1907	16	-37	31685	-16	454	5prime_fragment	FALSE	canonical	3	85	junction_3	3.42928563989645	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	-158166722	True	NA	NA	False	NA	NA	NA	158168296	158146415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158146914_158148864_158148955_158150452_158150590_158155314_158155352_158158272_158158365_158168139
transcript_126265.nic	chr6	-	654	2	ISM	ENSG00000122335.17	ENST00000648111.1	3949	19	1	52092	0	-14757	5prime_fragment	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTAATACAAGTTGTTTG	-158166693	True	NA	NA	False	NA	NA	NA	158168267	158161626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_158162153_158168139
transcript_126268.known	chr6	+	1102	4	FSM	ENSG00000272047.4	ENST00000648328.1	1102	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	301.69889330626	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAACAGAGAGACCCTG	158161866	True	NA	NA	False	AAAACA	-17	NA	158168349	158192881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158168396_158170469_158170539_158187039_158187122_158191976
transcript_126275.known	chr6	+	7483	3	FSM	ENSG00000272047.4	ENST00000607778.2	7483	3	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_1	122.5	4188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCACAGCCTGTTTT	158161866	True	NA	NA	False	AATAAA	-17	NA	158168349	158199344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158168396_158170469_158170539_158191976
transcript_126280.nnic	chr6	+	533	3	NNC	ENSG00000130338.13	novel	424	2	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAGAAGAAAAAAA	158228895	True	NA	NA	False	AAGAAA	-3	NA	158232194	158312358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_158232304_158282262_158282379_158312050
transcript_126282.known	chr6	+	680	2	FSM	ENSG00000130338.13	ENST00000620026.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTAATTTATTATTCCCC	158228936	True	NA	NA	False	AATGAA	-40	NA	158232235	158312662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158232304_158312050
transcript_126283.known	chr6	+	424	2	FSM	ENSG00000130338.13	ENST00000432358.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CTGCAAAAAGAAGAAAAAAA	NA	False	NA	NA	False	AAGAAA	-3	NA	158282262	158312358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158282379_158312050
transcript_126287.nnic	chr6	+	1042	2	NNC	ENSG00000146433.10	novel	5390	17	NA	NA	210	-82381	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGGTGTGTGCCTGTG	158536570	False	NA	NA	False	ATTAAA	-13	NA	158536645	158553047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_158536866_158552225
transcript_126296.known	chr6	-	730	5	FSM	ENSG00000146425.11	ENST00000367089.8	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	1444	junction_4	124.878691136639	18933	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTGTGTTCTTCATAG	-158631952	True	NA	-3	True	AATAAA	-16	NA	158644743	158636473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158636898_158637127_158637206_158637770_158637895_158641318_158641361_158644681
transcript_1263.known	chr1	-	1567	4	FSM	ENSG00000198912.12	ENST00000680169.1	1567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	136.01307126727	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATATATTTTGAAAATA	-3896586	True	NA	-43	True	AATACA	-14	NA	3900221	3889152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_3890074_3890568_3891058_3892882_3892990_3900171
transcript_126300.known	chr6	-	3052	14	FSM	ENSG00000092820.19	ENST00000367075.4	3052	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	911.585886465103	2500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGCAGCACGGGTGTGTG	-158799896	True	NA	-9	True	AATAAA	-16	NA	158819368	158765747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081_158818167_158819316
transcript_126301.known	chr6	-	3068	13	FSM	ENSG00000092820.19	ENST00000337147.11	3068	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	943.400155907697	2037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGGTGTGTGCTTGTGT	-158798755	False	NA	-2	True	AATAAA	-23	NA	158818227	158765740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158767079_158767260_158767513_158769325_158769419_158769783_158769945_158770763_158770895_158771243_158771408_158776407_158776505_158783519_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158789287_158789372_158818081
transcript_126302.known	chr6	-	956	8	FSM	ENSG00000092820.19	ENST00000476189.1	956	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1693.59305282332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAAGATGATAAGTGAGT	-158799877	True	NA	NA	False	NA	NA	NA	158819349	158783533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158783667_158784643_158784728_158785308_158785584_158787107_158787204_158788313_158788480_158789287_158789372_158818081_158818167_158819316
transcript_126305.known	chr6	+	980	4	FSM	ENSG00000203711.15	ENST00000650421.2	1135	4	106	49	19	0	multi-exon	FALSE	canonical	1	3	junction_2	2.05480466765633	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	158869813	True	NA	NA	False	AATAAA	-22	NA	158869957	158910353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158873527_158873622_158895220_158895367_158909966
transcript_126306.known	chr6	+	944	4	FSM	ENSG00000203711.15	ENST00000367073.7	1034	4	88	2	48	0	multi-exon	FALSE	canonical	2	3	junction_2	2.05480466765633	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869842	True	NA	NA	False	AATAAA	-20	NA	158869986	158910351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158873527_158873622_158895225_158895367_158909966
transcript_126308.known	chr6	+	735	4	FSM	ENSG00000203711.15	ENST00000659187.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTTGCAAGGAAGC	158869831	False	NA	NA	False	AATAAA	-19	NA	158869854	158910350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869966_158873527_158873622_158895220_158895367_158909966
transcript_126309.known	chr6	+	699	4	FSM	ENSG00000203711.15	ENST00000663340.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869754	True	NA	NA	False	AATAAA	-20	NA	158869898	158910351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869978_158873527_158873622_158895225_158895367_158909966
transcript_126314.nnic	chr6	+	892	3	NIC	ENSG00000203711.15	novel	1135	4	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869753	True	NA	NA	False	AATAAA	-20	NA	158869897	158910351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_158870311_158873527_158873622_158909966
transcript_126315.known	chr6	+	593	3	FSM	ENSG00000203711.15	ENST00000367072.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGCTTTGCAAGGAAGC	158869765	True	NA	NA	False	AATAAA	-19	NA	158869909	158910350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869978_158895225_158895367_158909966
transcript_126316.known	chr6	+	985	3	FSM	ENSG00000203711.15	ENST00000653976.1	985	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTTGCAAGGAAGCTTT	158869830	False	NA	NA	False	AATAAA	-22	NA	158869853	158910353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158895225_158895367_158909966
transcript_126317.known	chr6	+	975	3	FSM	ENSG00000203711.15	ENST00000655791.1	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	2.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869843	False	NA	NA	False	AATAAA	-20	NA	158869866	158910351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158895220_158895367_158909966
transcript_126318.known	chr6	+	655	3	FSM	ENSG00000203711.15	ENST00000666927.1	655	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTTTGCAAGGAAGCT	158869830	False	NA	NA	False	AATAAA	-20	NA	158869853	158910351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158869978_158895220_158895367_158909966
transcript_126319.known	chr6	+	1020	4	FSM	ENSG00000203711.15	ENST00000658761.1	1020	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTGCTTTGCAAGGA	158869765	True	NA	NA	False	AATAAA	-16	NA	158869909	158910347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158870311_158873529_158873622_158895220_158895367_158909966
transcript_126320.known	chr6	-	6576	8	FSM	ENSG00000130363.13	ENST00000367069.7	6576	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1.45686271816937	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTCTGTTTTTCATAA	-159000126	True	NA	-1	True	AATAAA	-17	NA	159000202	158972870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_158977849_158978259_158978347_158980773_158980937_158982484_158982689_158983661_158983808_158986279_158986422_158993838_158993927_158999434
transcript_126324.known	chr6	+	1296	3	FSM	ENSG00000271913.8	ENST00000659171.1	1296	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTTGTCCTGCAGGAACA	NA	False	NA	NA	False	AATATA	-29	NA	158999860	159028296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_158999911_159025948_159026042_159027143
transcript_126328.known	chr6	+	1774	3	FSM	ENSG00000271913.8	ENST00000667828.1	1774	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAGATAGACATATTTAAAA	158999655	True	NA	NA	False	NA	NA	NA	158999922	159028354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159000393_159025948_159026042_159027143
transcript_126333.known	chr6	+	464	2	FSM	ENSG00000271913.8	ENST00000665423.1	464	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGCTGTTGAATTTTTTT	158999967	False	NA	NA	False	AATAAA	-17	NA	159000234	159020390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159000393_159020084
transcript_126334.nnic	chr6	-	790	2	NNC	ENSG00000130363.13	novel	1904	6	NA	NA	19	-22455	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCGTGGTGTGGAGGAG	-159000107	True	NA	2	True	AATAAA	-18	NA	159000183	158999288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_158999607_158999711
transcript_126338.known	chr6	-	1878	11	FSM	ENSG00000120438.12	ENST00000392168.6	1878	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	757.19910855732	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATTACACATTAAAGTAA	-159758610	True	NA	-62	True	NA	NA	NA	159789703	159778986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159789404
transcript_126345.known	chr6	+	3656	8	FSM	ENSG00000146457.16	ENST00000358372.8	3656	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	183.214717348419	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTTTTTTGTTTTGTTT	NA	False	NA	16	True	AATAAA	-23	NA	159725584	159756319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159753459_159753615_159755027
transcript_126351.known	chr6	+	1623	7	FSM	ENSG00000146457.16	ENST00000614346.4	1623	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	181.217180936761	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATAGTTGGTTTTTTTTTT	159726976	False	NA	10	True	ATTAAA	-15	NA	159726997	159749416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159748370_159748589
transcript_126356.known	chr6	+	3280	8	FSM	ENSG00000146457.16	ENST00000650096.1	3280	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	194.223624532472	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTTGGTTTTTTTTTG	159726974	False	NA	NA	False	NA	NA	NA	159726995	159755713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727334_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190_159750011_159753459_159753615_159755027
transcript_126357.known	chr6	+	1622	6	FSM	ENSG00000146457.16	ENST00000337387.4	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	49.4246901861812	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATAGTTGGTTTTTTTTT	159718210	False	NA	9	True	ATTAAA	-14	NA	159727587	159749415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159727704_159736257_159736296_159738989_159739046_159742087_159742147_159743664_159743793_159748190
transcript_126364.known	chr6	-	1718	2	FSM	ENSG00000285427.1	ENST00000535372.1	1718	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGACATATTGAAACCAAA	-159762273	True	NA	-12	True	AATAAA	-26	NA	159762332	159760257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159761637_159761993
transcript_126366.known	chr6	-	990	6	FSM	ENSG00000112096.19	ENST00000367055.8	990	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	154.234107771271	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTTCACTGAGTTTC	-159693194	False	NA	55	True	TTTAAA	-16	NA	159693234	159679063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159688125_159688243_159692660_159692864_159693144
transcript_126367.known	chr6	-	815	5	FSM	ENSG00000112096.19	ENST00000367054.6	815	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	228.45937822729	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTCTGCATTATGCTTGC	-159693188	False	NA	3	True	AATAAA	-21	NA	159693228	159679115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159679299_159682473_159682639_159684853_159685034_159692660_159692864_159693144
transcript_126368.known	chr6	+	1520	9	FSM	ENSG00000120437.9	ENST00000367048.5	1520	9	0	0	0	0	multi-exon	FALSE	canonical	3	1585	junction_5	71.5453309098504	4119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGTAATTTAATAAGATCA	159749925	True	NA	-26	True	NA	NA	NA	159762044	159779112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159762143_159762918_159763054_159767004_159767187_159768510_159768629_159775169_159775314_159776149_159776273_159777301_159777457_159778169_159778281_159778658
transcript_126369.known	chr6	-	2352	12	FSM	ENSG00000120438.12	ENST00000321394.12	2352	12	0	0	0	0	multi-exon	FALSE	canonical	3	2281	junction_11	147.993131401929	2984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTATCTTACCTCG	-159758509	True	NA	-32	True	AATAAA	-23	NA	159789602	159778497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_159779262_159779626_159779791_159779894_159780088_159780442_159780567_159780934_159781111_159783940_159784068_159784665_159784848_159785385_159785497_159785899_159785998_159787742_159787872_159788057_159788144_159789404
transcript_126370.known	chr6	+	856	5	FSM	ENSG00000120437.9	ENST00000467951.1	856	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	717.621548937879	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGTGAGTATATCATA	159762475	False	NA	NA	False	NA	NA	NA	159762494	159775307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159762778_159762918_159763054_159767004_159767187_159768510_159768629_159775169
transcript_126387.known	chr6	+	758	4	FSM	ENSG00000112110.10	ENST00000476826.5	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	473.261027341149	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTTGGGCTTCAGAAGC	159789730	False	NA	-96	True	TTTAAA	-21	NA	159789811	159798313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159789889_159790939_159791127_159797286_159797519_159798051
transcript_126391.nnic	chr6	+	1054	4	NIC	ENSG00000112110.10	novel	758	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	210	junction_1	411.173929134618	5400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159789722	True	NA	20	True	AATAAA	-20	NA	159789803	159798429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr6_+_159790061_159790939_159791127_159797286_159797519_159798051
transcript_12640.known	chr1	+	741	3	FSM	ENSG00000143198.13	ENST00000488688.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	217	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGATGTAAAGATTCAT	165610131	True	NA	NA	False	NA	NA	NA	165631257	165651594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165631294_165649840_165649965_165651013
transcript_126412.known	chr6	+	970	4	FSM	ENSG00000112110.10	ENST00000367034.5	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	804	junction_1	133.386656004265	10726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGGTTATATGACATT	159782322	True	NA	20	True	AATAAA	-20	NA	159790466	159798429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159790640_159790939_159791127_159797286_159797519_159798051
transcript_126413.known	chr6	+	600	4	FSM	ENSG00000112110.10	ENST00000479638.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	506.370966343407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAATGTGGTGGCTTGTGA	159789612	False	NA	NA	False	ATTAAA	-19	NA	159789885	159797404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159790061_159790667_159790788_159790939_159791127_159797286
transcript_126414.known	chr6	+	1075	4	FSM	ENSG00000112110.10	ENST00000480842.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	476.084026197057	3401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGACATTGTCTGAG	159782372	False	NA	27	True	AATAAA	-27	NA	159790516	159798436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_159790788_159790939_159791127_159797286_159797519_159798051
transcript_126415.nnic	chr6	-	438	3	NNC	ENSG00000268257.2	novel	1489	3	NA	NA	1311	879	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATTTGTTTTTTCCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	160006353	160002411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_160002541_160004950_160005159_160006252
transcript_126424.nnic	chr6	-	746	3	NNC	ENSG00000112499.13	novel	1544	10	NA	NA	11114	15	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_2	4.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTCCAGAATGTATGTCA	-160234375	True	NA	NA	False	AATAAA	-20	NA	160234427	160216998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_160217499_160224704_160224805_160234281
transcript_126426.known	chr6	-	310	2	FSM	ENSG00000224371.6	ENST00000437861.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATGCATCAGAGTAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	160880394	160872887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_160873126_160880322
transcript_126431.nnic	chr6	-	1785	9	NNC	ENSG00000026652.15	novel	7923	9	NA	NA	174	-6095	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_8	28.1177768502419	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTGTATGTTGACAT	-161270261	False	NA	0	True	ATTAAA	-17	NA	161273789	161136073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273696
transcript_126432.known	chr6	-	7923	9	FSM	ENSG00000026652.15	ENST00000320285.9	7923	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	11.5913491449443	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACGTCTCTACACTGCCT	-161270533	True	NA	4	True	AATAAA	-28	NA	161274061	161129966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161166247_161166418_161232035_161232303_161273937
transcript_126436.known	chr6	-	7705	8	FSM	ENSG00000026652.15	ENST00000366911.9	7705	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	30.5934500126002	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTTGGAAAAATGCACGTC	-161270497	True	NA	-8	True	AATAAA	-16	NA	161274025	161129978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161136635_161139421_161139621_161146523_161146600_161149186_161149290_161153345_161153500_161154148_161154311_161232035_161232303_161273937
transcript_12644.known	chr1	+	1130	6	FSM	ENSG00000143198.13	ENST00000627653.1	1130	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	647.384707882415	1971	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGATTGTTTCTGTTGCTT	165611113	False	NA	NA	False	AATAAA	-20	NA	165632239	165656133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165632275_165649840_165649965_165651013_165651088_165651977_165652036_165654278_165654352_165655367
transcript_126441.known	chr6	-	942	3	FSM	ENSG00000026652.15	ENST00000366905.3	942	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	1	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCAGACATCACCTCTGC	-161270504	True	NA	NA	False	NA	NA	NA	161274032	161165837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_161166418_161232035_161232303_161273937
transcript_126442.known	chr6	-	350	2	FSM	ENSG00000185345.24	ENST00000674250.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATACTTGTAAATTTTAA	-162727493	True	NA	NA	False	AATAAA	-18	NA	162727771	162624345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_162624586_162727661
transcript_126457.known	chr6	-	659	9	FSM	ENSG00000198818.10	ENST00000478705.5	659	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	550.561517339343	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCCCCATAAAACACTC	-166325791	True	NA	NA	False	NA	NA	NA	166342576	166320155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_12647.known	chr1	-	2696	11	FSM	ENSG00000143149.13	ENST00000354775.5	2395	11	-301	0	-301	0	multi-exon	FALSE	canonical	3	334	junction_10	39.8232344241399	451	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTATCGTGTTTTGAAAC	NA	False	NA	-5	True	AATAAA	-18	NA	165698863	165662215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165663145_165665017_165665131_165667308_165667451_165668925_165669014_165669261_165669451_165679441_165679583_165680486_165680684_165682106_165682242_165682980_165683111_165695251_165695398_165698377
transcript_126479.known	chr6	-	2576	8	FSM	ENSG00000198818.10	ENST00000487841.5	2576	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	574.071601877007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCATTTTTAAGATTT	-166325762	True	NA	NA	False	ATTAAA	-20	NA	166342547	166319859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166320257_166322856_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166331384_166331408_166342418
transcript_126498.nnic	chr6	-	466	2	NNC	ENSG00000198818.10	novel	1033	8	NA	NA	-43	-5908	at_least_one_novel_splicesite	FALSE	canonical	3	111	junction_1	0	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTACAGCGTGATGTTT	-166325834	True	NA	-12	True	AATAAA	-16	NA	166342619	166331780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_166332046_166342418
transcript_1265.nnic	chr1	+	666	2	Antisense	novelGene_ENSG00000131697.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCTTCTTCACCAACAT	NA	False	NA	NA	False	ATTAAA	-19	NA	5897381	5902687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_5897585_5902224
transcript_126501.known	chr6	-	1033	8	FSM	ENSG00000198818.10	ENST00000361731.4	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	59.9615523073081	5080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCTGAATCAAATTTA	-166325760	True	NA	-13	True	AATAAA	-20	NA	166342545	166319727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166320257_166322856_166322887_166324536_166324596_166326131_166326168_166328275_166328358_166329506_166329590_166330160_166330248_166342418
transcript_126502.known	chr6	+	3871	2	FSM	ENSG00000286760.2	ENST00000659081.2	3910	2	39	0	20	0	multi-exon	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAAATTATGTGGTGCTGA	166342566	True	NA	NA	False	AATAAA	-15	NA	166342664	166351466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166343148_166348078
transcript_126504.known	chr6	+	3461	2	FSM	ENSG00000286760.2	ENST00000666448.1	3461	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATCTCACTTGATC	166342533	True	NA	NA	False	NA	NA	NA	166342631	166351444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166342727_166348078
transcript_126508.known	chr6	-	1192	5	FSM	ENSG00000060762.19	ENST00000621685.4	1192	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	94.5155410501363	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166380024	True	NA	-35	True	AATAAA	-21	NA	166383013	166364918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366892_166366968_166367188_166382805
transcript_126513.known	chr6	-	976	4	FSM	ENSG00000060762.19	ENST00000341756.10	976	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	93.5746879354787	2005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166380024	True	NA	-35	True	AATAAA	-21	NA	166383013	166364918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366895_166382805
transcript_126514.known	chr6	-	904	5	FSM	ENSG00000060762.19	ENST00000360961.11	904	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.037348305196	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTATGATTAAATATCTT	-166379951	True	NA	-35	True	AATAAA	-21	NA	166382940	166364918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166365454_166365973_166366107_166366794_166366892_166370217_166370222_166382805
transcript_126520.nic	chr6	-	589	3	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	-287	349871	-287	-347814	5prime_fragment	FALSE	canonical	0	0	junction_2	7.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	NA	False	NA	-1	True	ATTAAA	-17	NA	166862957	166858093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_166858260_166862107_166862191_166862617
transcript_126522.nic	chr6	-	627	2	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	102	349871	-17	-347814	internal_fragment	FALSE	canonical	3	15	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	-166862544	False	24	-1	True	ATTAAA	-17	NA	166862568	166858093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_166858260_166862107
transcript_126523.nnic	chr6	-	1024	10	Fusion	ENSG00000227598.1_ENSG00000026297.17	novel	887	10	NA	NA	-20	0	multi-exon	FALSE	canonical	0	0	junction_6	149.266932989027	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-166998188	True	NA	-21	True	AAAAAG	-39	NA	166999085	166929515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096_166956192_166998917
transcript_126524.known	chr6	-	1220	9	FSM	ENSG00000026297.17	ENST00000028008.9	1220	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.617100354279	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAAACTGCAGCTTTCT	-166953295	True	NA	-50	True	AAAAAG	-10	NA	166956584	166929544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166956096
transcript_126525.nnic	chr6	-	994	9	Fusion	ENSG00000227598.1_ENSG00000026297.17	novel	1220	9	NA	NA	-85	0	multi-exon	FALSE	canonical	0	0	junction_6	157.427314577236	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-166999127	False	NA	-21	True	AAAAAG	-39	NA	166999150	166929515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948565_166948626_166952487_166952549_166998917
transcript_126527.known	chr6	-	2234	8	FSM	ENSG00000026297.17	ENST00000611959.2	2234	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	90.4377111156443	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAACCATATTGTCAGC	-166953312	True	NA	NA	False	NA	NA	NA	166956601	166928487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166956096
transcript_126528.nnic	chr6	-	934	8	Fusion	ENSG00000227598.1_ENSG00000026297.17	novel	2234	8	NA	NA	-85	0	multi-exon	FALSE	canonical	2	12	junction_7	142.880998008261	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-166999127	False	NA	-21	True	AAAAAG	-39	NA	166999150	166929515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166952487_166952549_166998917
transcript_126533.known	chr6	-	1961	7	FSM	ENSG00000026297.17	ENST00000620173.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	138.297987452216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTTAATCCTTAGAATA	-166953111	False	NA	NA	False	AATAGA	-37	NA	166956400	166928501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166952487_166952549_166956096
transcript_126534.nnic	chr6	-	796	6	Fusion	ENSG00000227598.1_ENSG00000026297.17	novel	3954	6	NA	NA	-66	0	multi-exon	FALSE	canonical	1	6	junction_5	152.65385681338	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-166998234	True	NA	-21	True	AAAAAG	-39	NA	166999131	166929515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166998917
transcript_126538.known	chr6	-	2536	5	FSM	ENSG00000026297.17	ENST00000683770.1	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	160.922924097221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGACAAGATCTGATTTG	-166953184	False	NA	NA	False	NA	NA	NA	166956473	166927867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166956096
transcript_126539.nnic	chr6	-	699	5	Fusion	ENSG00000227598.1_ENSG00000026297.17	novel	1924	9	NA	NA	-40	0	multi-exon	FALSE	canonical	0	0	junction_4	171.210944451574	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAAGTGAAGTCTGTTT	-166998208	True	NA	-21	True	AAAAAG	-39	NA	166999105	166929515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166998917
transcript_126548.nnic	chr6	-	627	2	ISM	ENSG00000071242.12	ENST00000506565.1	587	8	102	349871	-17	-347814	internal_fragment	FALSE	canonical	3	15	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGACATATGTGTCT	-166862544	False	24	-1	True	ATTAAA	-17	NA	166862568	166858093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_166858260_166862107
transcript_126549.known	chr6	-	887	10	FSM	ENSG00000026297.17	ENST00000476238.6	887	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	153.068612066615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCAGCTTTCTAAAAA	NA	False	NA	-45	True	AAAAAG	-15	NA	166957184	166929539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_166929792_166931043_166931119_166934090_166934137_166938894_166939009_166943018_166943090_166946681_166946740_166948569_166948626_166952487_166952549_166956096_166956192_166957125
transcript_126553.known	chr6	+	5310	13	FSM	ENSG00000272980.4	ENST00000609590.1	5310	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	169.90460967522	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGAATCGTATTTCAGCT	166993356	True	NA	NA	False	AATAAA	-21	NA	166999404	167139141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167004402_167010812_167010894_167022408_167022636_167024784_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167044404_167044577_167134933_167135067_167136037_167136144_167136239
transcript_126557.known	chr6	+	13956	13	FSM	ENSG00000213066.13	ENST00000366847.9	13956	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_7	77.717928362051	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTGTCTGCGATCTTT	166993348	True	NA	NA	False	AATAAA	-19	NA	166999396	167052718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507_167013568_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_12656.known	chr1	-	1912	7	FSM	ENSG00000143183.18	ENST00000367881.11	1912	7	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_4	38.1400926410341	1255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGAGAGTTGAATTATTA	-165758350	True	NA	NA	False	AATAAA	-22	NA	165768868	165726794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768681
transcript_126562.known	chr6	+	1484	12	FSM	ENSG00000213066.13	ENST00000349556.4	1484	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_6	56.5738017223725	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTGTGTGGCTGC	166993359	True	NA	5	True	AATAAA	-18	NA	166999407	167040317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167039903
transcript_12657.known	chr1	-	1735	9	FSM	ENSG00000143183.18	ENST00000580248.5	1735	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	324.400191700005	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATTAAATATAAAT	-165827706	False	NA	-44	True	TTTAAA	-34	NA	165827755	165727305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165797696_165797814_165799917_165800036_165827469
transcript_126579.nic	chr6	+	1379	7	ISM	ENSG00000213066.13	ENST00000366847.9	13956	13	-90	38457	-10	2570	5prime_fragment	FALSE	canonical	3	175	junction_6	75.2235557078588	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTGTTCTGTCATT	166993258	True	NA	NA	False	ATTAAA	-24	NA	166999306	167014261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167010812_167010894_167013507
transcript_12658.known	chr1	-	1100	7	FSM	ENSG00000143183.18	ENST00000464650.5	1100	7	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	218.607461497137	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGATCTGTTTCATTTT	-165758358	True	NA	-4	True	AATAAA	-32	NA	165768876	165727537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_165728122_165743166_165743312_165752101_165752170_165754227_165754275_165759524_165759585_165768191_165768270_165768758
transcript_126582.known	chr6	+	3451	11	FSM	ENSG00000213066.13	ENST00000622353.4	3451	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	135.354497524094	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTTGTGCTTTTATACT	166993268	True	NA	14	True	AATAAA	-25	NA	166999316	167042418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_166999515_167000059_167000114_167003192_167003248_167003722_167003812_167004263_167004402_167022408_167022636_167024781_167024895_167026546_167026616_167032602_167032643_167033874_167033972_167040047
transcript_12659.known	chr1	+	4838	8	FSM	ENSG00000143179.16	ENST00000642653.1	4838	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	212.5010444152	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAAGGCTCTCGCCTTC	165825713	True	NA	9	True	AATAAA	-6	NA	165827804	165911608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165827933_165885141_165885380_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_126605.nnic	chr6	+	885	5	NNC	ENSG00000280707.3	novel	629	4	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_2	308.109558436605	812	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167228037	False	NA	27	True	AATAAA	-16	NA	167228066	167237511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_+_167228398_167231204_167231308_167231859_167231958_167232478_167232561_167237240
transcript_126616.known	chr6	+	674	4	FSM	ENSG00000280707.3	ENST00000625787.3	980	4	25	281	7	-281	multi-exon	FALSE	canonical	3	94	junction_3	498.442240050607	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGCTATTTTGCCGA	167214676	True	NA	NA	False	NA	NA	NA	167228306	167233645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167233242
transcript_126622.nic	chr6	+	1658	4	FSM	ENSG00000280707.3	ENST00000691081.1	629	4	-1035	6	-1009	0	multi-exon	FALSE	canonical	3	489	junction_3	328.232979587501	2993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167227177	False	NA	27	True	AATAAA	-16	NA	167227190	167237511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167228398_167231859_167231958_167232478_167232561_167237240
transcript_12663.known	chr1	+	4801	7	FSM	ENSG00000143179.16	ENST00000367879.9	4801	7	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_3	32.170120712653	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGCCTTCTGTGTGATGC	165819757	True	NA	19	True	AATAAA	-16	NA	165827613	165911618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_165827933_165890203_165890364_165891225_165891323_165896189_165896333_165903181_165903280_165905920_165905970_165907683
transcript_126651.known	chr6	+	582	4	FSM	ENSG00000280707.3	ENST00000628362.2	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	357.98448135204	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167214669	True	NA	27	True	AATAAA	-16	NA	167228299	167237511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167228398_167231826_167231958_167232478_167232561_167237240
transcript_126666.known	chr6	+	403	3	FSM	ENSG00000280707.3	ENST00000626424.2	573	3	164	6	64	0	multi-exon	FALSE	canonical	3	226	junction_2	533.5	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTTTGTTCTTTTTGT	167228296	False	NA	27	True	AATAAA	-16	NA	167228363	167237511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167228398_167231859_167231958_167237240
transcript_126687.nnic	chr6	+	437	2	Fusion	ENSG00000280707.3_ENSG00000228648.1	novel	573	3	NA	NA	-109	0	multi-exon	FALSE	canonical	3	15	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGGGTCTCTGGTTTTT	167227843	True	NA	11	True	AATGAA	-15	NA	167228090	167245916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr6_+_167228398_167245786
transcript_126697.known	chr6	+	724	2	FSM	ENSG00000287594.2	ENST00000662677.2	847	2	26	97	0	-95	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAATGACTGGTTTCGCA	167678207	True	NA	NA	False	AATAAA	-18	NA	167678231	167679523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_167678606_167679173
transcript_1267.known	chr1	+	4302	16	FSM	ENSG00000069424.16	ENST00000378097.6	4302	16	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	11.4833212385035	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGCTCCTCTCATTTC	NA	False	NA	21	True	AATAAA	-29	NA	5992261	6101193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_126706.nnic	chr6	-	536	4	FSM	ENSG00000198221.11	ENST00000425438.2	533	4	-8	5	-2	0	multi-exon	FALSE	canonical	1	3	junction_1	16.0485374896143	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	-167826335	True	NA	-7	True	AATAAA	-13	NA	167826796	167824109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824229_167824582_167824807_167825402_167825503_167826703
transcript_126714.known	chr6	-	1639	3	FSM	ENSG00000198221.11	ENST00000663809.2	1660	3	21	0	3	0	multi-exon	FALSE	canonical	1	1	junction_2	18.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAAATATGAGGACAGA	-167826351	True	NA	NA	False	AAAAAG	-16	NA	167826812	167823341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824807_167825402_167825551_167826786
transcript_126715.nnic	chr6	-	688	3	NNC	ENSG00000198221.11	novel	620	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	17.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	-167826354	True	NA	-3	True	ATTAAA	-18	NA	167826815	167824379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_167824807_167825402_167825503_167826654
transcript_126716.nnic	chr6	-	620	3	FSM	ENSG00000198221.11	ENST00000692751.1	620	3	-2	2	-2	-2	multi-exon	FALSE	canonical	2	5	junction_2	16.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	-167826335	True	NA	-3	True	ATTAAA	-18	NA	167826796	167824379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_167824807_167825402_167825503_167826703
transcript_126717.nnic	chr6	-	736	3	NNC	ENSG00000198221.11	novel	967	3	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGAGTGGTATATCAAT	-167826354	True	NA	-3	True	ATTAAA	-18	NA	167826815	167824379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr6_-_167824807_167825402_167825551_167826654
transcript_12672.known	chr1	+	473	3	FSM	ENSG00000229588.3	ENST00000653824.2	2342	3	59	1810	59	-1810	multi-exon	FALSE	canonical	0	0	junction_1	1	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCCTTCTCTGGTTCTTCT	166165880	True	NA	NA	False	ATTAAA	-17	NA	166165910	166339090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_166166055_166335327_166335466_166338899
transcript_126720.known	chr6	-	311	2	ISM	ENSG00000198221.11	ENST00000686435.1	577	4	2013	2	686	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATCTTCTATTCTCATT	-167824749	False	NA	-7	True	AATAAA	-13	NA	167824774	167824109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_167824229_167824582
transcript_12673.known	chr1	+	5751	6	FSM	ENSG00000143157.12	ENST00000367876.9	5751	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	21.2320512433443	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGGCATACCTTAGTTG	166836634	True	NA	NA	False	AAAAAG	-21	NA	166839474	166856359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_166839605_166840954_166841089_166846611_166846739_166847493_166847593_166848937_166850424_166852584
transcript_126740.known	chr6	-	481	2	FSM	ENSG00000186340.17	ENST00000472733.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTATTGTCTTTGAGTG	-169248264	False	NA	NA	False	AGTAAA	-16	NA	169248680	169246064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_169246282_169248416
transcript_126764.nic	chr6	-	1176	5	ISM	ENSG00000184465.16	ENST00000647889.1	4654	16	-128	13025	0	-462	5prime_fragment	FALSE	canonical	3	44	junction_1	38.2916439970916	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAGCTCATTGTCATTCT	-169697065	True	NA	NA	False	NA	NA	NA	169702067	169670818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_-_169670958_169672254_169672397_169688816_169689013_169689126_169689309_169701550
transcript_126766.known	chr6	-	951	4	FSM	ENSG00000184465.16	ENST00000474018.1	951	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	23.1564725772779	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCAGCATCACTGGATTA	-169697046	True	NA	NA	False	AATAAA	-19	NA	169702048	169672321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_169672397_169688816_169689013_169689126_169689309_169701550
transcript_126767.known	chr6	-	403	3	FSM	ENSG00000232640.1	ENST00000413088.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGGCTCCCACGTTCTCG	NA	False	NA	NA	False	AATAAA	-14	NA	169725854	169725090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_169725317_169725420_169725570_169725826
transcript_126768.known	chr6	+	2667	1	FSM	ENSG00000185127.6	ENST00000332290.3	2667	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTTAGTATTTCAGTAG	169698399	True	NA	14	True	AATAAA	-8	NA	169702189	169704856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169702200_169704900
transcript_126769.known	chr6	-	2078	1	FSM	ENSG00000184786.6	ENST00000628156.1	2078	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGAGTTCCTGTTGTTG	NA	False	NA	-2	True	AATAAA	-19	NA	169751587	169749509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_169749500_169751600
transcript_126772.known	chr6	+	2160	18	FSM	ENSG00000130023.16	ENST00000366773.8	2160	18	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	16.2062826896212	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGCCAGGGTCCAGGT	169751331	True	NA	102	True	ATTAAA	-30	NA	169751621	169781600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169751664_169753863_169754033_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_126777.known	chr6	+	1908	17	FSM	ENSG00000130023.16	ENST00000392095.8	1908	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	22.9455878111675	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCAGGATGCTTTTAAT	169751334	True	NA	22	True	AGTAAA	-20	NA	169751624	169781520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_169751664_169755282_169755423_169756337_169756440_169756718_169756809_169758967_169759066_169759837_169759975_169760641_169760757_169762428_169762532_169766637_169766668_169768102_169768172_169769539_169769714_169773318_169773403_169775269_169775347_169775939_169776066_169776454_169776674_169779181_169779296_169781329
transcript_126783.known	chr6	+	5155	11	FSM	ENSG00000112584.14	ENST00000476287.4	5155	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_7	20.7451199080651	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTTCACATTTCTCTG	170304521	True	NA	NA	False	AATAAA	-29	NA	170306757	170407067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170306843_170317369_170319125_170323078_170323260_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_126790.known	chr6	+	1794	9	FSM	ENSG00000112584.14	ENST00000625626.1	1794	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	49.2487309481168	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTATGTGTTCTCTTGGTC	170304521	True	NA	NA	False	NA	NA	NA	170306757	170405642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170306843_170330448_170330551_170348150_170348324_170358225_170358319_170388286_170388494_170391012_170391122_170395486_170395580_170404549_170404602_170404762
transcript_1268.known	chr1	+	2134	16	FSM	ENSG00000069424.16	ENST00000428161.6	2134	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.1223498716174	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCAGGAATCTGGGGCCT	NA	False	NA	NA	False	NA	NA	NA	6026012	6099119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_12680.known	chr1	-	2096	8	FSM	ENSG00000152382.6	ENST00000367874.5	2096	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_4	45.1595809889999	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTGTTTATTAAACAT	-166871558	True	NA	0	True	AATAAA	-16	NA	166876264	166856509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_166857720_166858118_166858282_166860185_166860338_166862202_166862413_166863823_166863922_166869444_166869511_166869762_166869855_166876159
transcript_12681.known	chr1	-	415	1	FSM	ENSG00000213068.3	ENST00000450126.1	415	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTTCTGCAATACTGTAA	-167162781	False	NA	NA	False	NA	NA	NA	167162837	167162422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167162400_167162800
transcript_12682.known	chr1	-	682	1	FSM	ENSG00000272205.1	ENST00000606967.1	682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATCGTGAATTTTATTT	-167220447	True	NA	-4	True	AATAAA	-17	NA	167220512	167219830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167219800_167220500
transcript_126828.known	chr6	-	891	6	FSM	ENSG00000008018.9	ENST00000262193.7	891	6	0	0	0	0	multi-exon	TRUE	canonical	3	4256	junction_4	414.830085697747	49599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTGCTATAACTTGT	-170527144	True	NA	-15	True	ATTAAA	-17	NA	170553307	170535119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170535406_170537233_170537341_170543600_170543731_170546102_170546185_170549005_170549114_170553129
transcript_126830.known	chr6	+	1861	8	FSM	ENSG00000112592.15	ENST00000230354.10	1861	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	77.1730099800944	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTGTAAGAGTCATGTG	170550673	True	NA	24	True	AATAAA	-32	NA	170554378	170572870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_+_170554464_170556878_170557084_170561790_170562234_170564544_170564633_170566917_170567010_170569611_170569780_170571409_170571505_170572185
transcript_126833.nic	chr6	+	1444	4	ISM	ENSG00000112592.15	ENST00000421512.5	935	5	52	1724	-15	-1724	5prime_fragment	FALSE	canonical	3	295	junction_1	39.3813266522205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTGTTTTGTATCTT	170550648	True	NA	NA	False	AATAAA	-20	NA	170554353	170565233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_170554464_170556881_170557084_170561790_170562234_170564544
transcript_126835.nic	chr6	+	1044	3	ISM	ENSG00000112592.15	ENST00000421512.5	935	5	21	4466	-10	303	5prime_fragment	FALSE	canonical	3	295	junction_1	42.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTGTCGTTATTATTA	170550617	True	NA	NA	False	AATAAA	-13	NA	170554322	170562491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr6_+_170554464_170556881_170557084_170561790
transcript_126836.known	chr6	-	936	7	FSM	ENSG00000071994.11	ENST00000392090.6	936	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	212.247497040601	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCATCTTAAAGCCTTGAA	-170584568	False	NA	-47	True	NA	NA	NA	170584581	170577558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170577718_170578856_170578971_170580001_170580106_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_126848.known	chr6	-	1114	5	FSM	ENSG00000071994.11	ENST00000537445.5	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	289.060871617035	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCTTTTATTTTGAGA	-170565484	True	NA	-17	True	AATAAA	-16	NA	170584615	170581744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr6_-_170582266_170583056_170583189_170583504_170583748_170584298_170584393_170584491
transcript_12685.known	chr1	+	13843	16	FSM	ENSG00000143190.23	ENST00000367866.7	13843	16	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.8791339524594	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTGGAGTTTCTTTGA	167217790	True	NA	29	True	ATTAAA	-21	NA	167220885	167427340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028_167376156_167383856_167383952_167389587_167389762_167396285_167396428_167397993_167398134_167399185_167399366_167401450_167401557_167411958_167412305_167413025_167413115_167415499
transcript_126853.known	chr7	-	877	3	FSM	ENSG00000232325.4	ENST00000465755.2	877	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCGGGATATATTCCCA	NA	False	NA	NA	False	NA	NA	NA	95683	70971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_71572_71676_71834_95563
transcript_126854.nnic	chr7	-	1507	3	NNC	ENSG00000232325.4	novel	877	3	NA	NA	-466	156	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCCTCCTGAGTTGCT	NA	False	NA	NA	False	CATAAA	-20	NA	96149	70815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_71572_75531_75697_95563
transcript_126861.nic	chr7	-	795	4	NIC	ENSG00000242474.3	novel	811	4	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	17.9071680247511	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGTCATTTCAGGT	NA	False	NA	-3	True	AATAAA	-13	NA	149546	144443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144812_145293_145416_148531_148619_149328
transcript_126862.known	chr7	-	811	4	FSM	ENSG00000242474.3	ENST00000660888.1	811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.4419672692682	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCTGTCATTTCAGGT	-148701	False	NA	-3	True	AATAAA	-13	NA	149466	144443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144812_145293_145416_148531_148715_149328
transcript_126863.known	chr7	-	1201	3	FSM	ENSG00000242474.3	ENST00000659412.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	17	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTCATTTCAGGTATTA	-148701	False	NA	1	True	AATAAA	-17	NA	149466	144439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_145416_148531_148619_149328
transcript_126870.known	chr7	-	2091	3	FSM	ENSG00000242474.3	ENST00000665089.1	2091	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	-148663	True	NA	-7	True	ATTAAA	-16	NA	149428	145935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_147840_148531_148619_149328
transcript_126872.nnic	chr7	-	2261	3	NNC	ENSG00000242474.3	novel	2091	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	11	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGAAGTTTTCTTTT	NA	False	NA	-7	True	ATTAAA	-16	NA	149546	145935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_147892_148531_148619_149328
transcript_126876.known	chr7	-	746	2	FSM	ENSG00000242474.3	ENST00000497320.2	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGTTTCATTCAGTTGT	-148701	False	NA	NA	False	TTTAAA	-9	NA	149466	148010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148619_149328
transcript_126877.known	chr7	-	593	2	FSM	ENSG00000242474.3	ENST00000487884.2	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCGTGAGTCCTTAAAG	-148673	True	NA	NA	False	NA	NA	NA	149438	148231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148715_149328
transcript_126885.known	chr7	-	605	3	FSM	ENSG00000242474.3	ENST00000658260.1	605	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCCTACAGCCCAGAGG	-148671	True	NA	NA	False	AATAAA	-29	NA	149436	135861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_136272_148531_148619_149328
transcript_126886.known	chr7	+	3176	10	FSM	ENSG00000177706.9	ENST00000313766.6	3176	10	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_5	10.9284993830549	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCCTGGTGTGTGGCTGCC	NA	False	NA	49	True	AATAAA	-43	NA	192570	260772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_193805_195553_195733_208897_208977_246414_246508_248314_248431_255848_256030_256653_256764_257004_257087_258645_258706_259730
transcript_126889.known	chr7	-	420	3	FSM	ENSG00000234471.1	ENST00000434541.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTAAGAGCGACTCTGGC	-496084	False	NA	NA	False	AATAAA	-17	NA	496118	484106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_484200_494843_494957_495904
transcript_126892.known	chr7	-	2305	6	FSM	ENSG00000197461.13	ENST00000402802.7	2305	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.31058907144937	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGGACGTGAGAAGCGT	-519316	False	NA	-14	True	ATTAAA	-23	NA	519409	497257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_498575_501115_501243_510808_510997_512350_512456_517393_517491_518938
transcript_126896.known	chr7	+	743	3	FSM	ENSG00000223855.3	ENST00000663680.2	754	3	0	11	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	522415	True	NA	11	True	AATAAA	-19	NA	522541	525233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_522704_524079_524281_524853
transcript_126897.nnic	chr7	+	651	2	FSM	ENSG00000223855.3	ENST00000690212.1	609	2	-49	7	-49	0	multi-exon	FALSE	canonical	3	6	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCCATTTCTCGCA	522416	False	NA	11	True	AATAAA	-19	NA	522432	525233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_522704_524853
transcript_126898.known	chr7	+	1309	2	FSM	ENSG00000223855.3	ENST00000662957.2	1311	2	0	2	0	-2	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATTTCTCGCATACTG	522427	True	NA	16	True	AATAAA	-24	NA	522553	525238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_522704_524079
transcript_12690.nic	chr1	+	915	7	ISM	ENSG00000143190.23	ENST00000367866.7	13843	16	-36	51036	-26	2121	5prime_fragment	FALSE	canonical	3	32	junction_1	4.59770474137791	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTGTTTTTTGTC	167220831	False	NA	NA	False	ATTAAA	-34	NA	167220849	167376304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_167220959_167332469_167332536_167365466_167365568_167370160_167370215_167371916_167372037_167374107_167374297_167376028
transcript_126900.known	chr7	-	2472	11	FSM	ENSG00000188191.15	ENST00000537384.6	2472	11	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_10	119.527779197976	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTCCCGGCTCGGGAGG	-723018	False	4263	-41	True	ATTAAA	-15	NA	727281	549197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727209
transcript_126902.known	chr7	-	1917	11	FSM	ENSG00000188191.15	ENST00000403562.5	1917	11	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_10	51.2375838618489	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGACCCCAGTAGGGGG	-723387	True	NA	NA	False	GGGGCT	-30	NA	727650	549741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_727589
transcript_12691.nnic	chr1	-	1550	7	NNC	ENSG00000198821.11	novel	1678	8	NA	NA	-54	0	intron_retention	FALSE	canonical	1	2	junction_1	1.4142135623731	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTACTAAGCTTTATTTC	-167439600	False	NA	1	True	AATAAA	-19	NA	167439694	167430639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343_167439401_167439515
transcript_12693.known	chr1	-	1078	6	FSM	ENSG00000198821.11	ENST00000470379.1	1078	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.46969384566991	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGATGGAAAGGAGCCTAG	-167439546	True	NA	NA	False	NA	NA	NA	167439640	167431172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435432_167438569_167438651_167439343
transcript_126934.known	chr7	-	2494	11	FSM	ENSG00000188191.15	ENST00000544935.5	2494	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	152.500524589262	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCCGGCTCGGGAGGC	-712921	False	NA	-40	True	ATTAAA	-16	NA	712940	549196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_550603_551388_551471_579255_579378_584507_584569_596145_596305_606192_606240_607390_607453_677228_677321_680555_680727_711328_711528_712847
transcript_126935.known	chr7	+	298	2	FSM	ENSG00000164818.16	ENST00000461576.1	298	2	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCATCCACAAGCACCGC	NA	False	NA	NA	False	NA	NA	NA	779903	785573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_780145_785516
transcript_12694.known	chr1	-	1074	6	FSM	ENSG00000198821.11	ENST00000476733.5	1074	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.72046505340853	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTAGGCCAGGTGCAAC	-167439527	True	NA	NA	False	NA	NA	NA	167439621	167431160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167431747_167433023_167433060_167434019_167434077_167435398_167435435_167438569_167438651_167439343
transcript_126944.nic	chr7	+	3935	19	NIC	ENSG00000164828.18	novel	3868	18	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	150	junction_6	110.706443654679	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806854	True	NA	9	True	AATAAA	-22	NA	816588	874902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_126945.known	chr7	+	3812	18	FSM	ENSG00000164828.18	ENST00000389574.7	3812	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	119.132707835105	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGGGATATAAACAGTCTA	806880	True	NA	9	True	AATAAA	-22	NA	816614	874902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_126947.known	chr7	+	3717	17	FSM	ENSG00000164828.18	ENST00000452783.6	3717	17	0	0	0	0	multi-exon	FALSE	canonical	2	61	junction_4	143.564445459173	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	806880	True	NA	27	True	AATAAA	-40	NA	816614	874920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_851949_852044_852608_852668_852812_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_126948.known	chr7	+	2090	9	FSM	ENSG00000239857.7	ENST00000265857.8	2090	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	37.1397277184419	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAACGCTGGTCCTTTC	870792	True	NA	8	True	AATAAA	-16	NA	876553	896436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_876801_886055_886135_886568_886651_887369_887520_890927_891067_892277_892419_893739_893816_893898_893972_895333
transcript_126954.nic	chr7	+	1061	6	NIC	ENSG00000164828.18	novel	1309	7	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	223	junction_1	96.873938703864	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTATTTTTATAAAAC	806854	True	NA	NA	False	AATAAA	-23	NA	816588	843818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_816674_832504_832602_838797_838987_841945_842131_843205_843233_843340
transcript_126955.nic	chr7	+	969	5	ISM	ENSG00000164828.18	ENST00000389574.7	3812	18	-31	31084	-31	0	5prime_fragment	FALSE	canonical	3	177	junction_1	127.891555624287	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTTTATTTTTATAAAAC	806849	True	NA	NA	False	AATAAA	-23	NA	816583	843818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_838797_838987_841945_842131_843205_843233_843340
transcript_126956.known	chr7	+	570	5	FSM	ENSG00000164828.18	ENST00000450538.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_4	177.683707750598	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATAAGCTTTCACCTT	806880	True	NA	NA	False	NA	NA	NA	816614	843006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_816674_832504_832602_838797_838987_841945_842131_842966
transcript_126962.nic	chr7	+	565	3	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	-26	3826	-26	0	5prime_fragment	FALSE	canonical	3	223	junction_1	90	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	806854	True	NA	13	True	AATAAA	-21	NA	816588	839180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_832504_832602_838797
transcript_126963.nic	chr7	+	473	2	ISM	ENSG00000164828.18	ENST00000427969.5	520	4	-31	3388	-31	0	5prime_fragment	FALSE	canonical	3	177	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	806849	True	NA	13	True	AATAAA	-21	NA	816583	839180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_838797
transcript_126964.nic	chr7	+	333	2	ISM	ENSG00000164828.18	ENST00000450538.5	570	5	-26	10254	-26	-6234	5prime_fragment	FALSE	canonical	3	223	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTGGTTTTTTCTTACGG	806854	True	NA	NA	False	AATAAA	-19	NA	816588	832752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_816674_832504
transcript_126965.known	chr7	+	478	2	FSM	ENSG00000164828.18	ENST00000483996.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGGCTTGTCTAGTA	NA	False	NA	13	True	AATAAA	-21	NA	832506	839180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_832602_838797
transcript_126966.known	chr7	+	4010	19	FSM	ENSG00000164828.18	ENST00000401592.6	4010	19	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	115.202947600322	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCTGTTTCTGCCCCT	NA	False	NA	41	True	TATAAA	-20	NA	832475	874934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851383_851483_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_126967.known	chr7	+	3868	18	FSM	ENSG00000164828.18	ENST00000425407.6	3868	18	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	100.465525426924	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTTTTCTCAGTTTGT	NA	False	NA	27	True	AATAAA	-40	NA	832504	874920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_832602_838797_838987_841945_842131_843205_843233_843340_843521_851949_852044_852608_852668_852809_852953_853408_853619_854919_855007_856357_856402_857827_857958_860127_860383_861379_861465_865951_866068_869348_869517_872469_872563_873214
transcript_126968.known	chr7	-	2118	11	FSM	ENSG00000105963.15	ENST00000611167.4	2118	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	8.17557337438788	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTGTGTCCGAGGATGG	-945527	False	289	-2	True	AATAAA	-22	NA	945816	897900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_898950_899032_899262_899418_899491_900101_900165_900532_900617_904125_904273_905059_905173_919967_920051_926552_926645_935374_935506_945761
transcript_12697.known	chr1	+	4978	6	FSM	ENSG00000197965.12	ENST00000359523.7	4978	6	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_5	70.4812031679369	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTTAGTAATTTTATAA	167710863	True	NA	16	True	AATAAA	-17	NA	167721981	167791919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167722243_167765582_167765750_167772274_167772489_167773235_167773369_167776063_167776167_167787819
transcript_126972.known	chr7	-	4839	3	FSM	ENSG00000240230.6	ENST00000344111.4	4839	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	10.5	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGAGCGTTTTCCAAG	-974228	True	NA	-4	True	ATTAAA	-17	NA	975549	964851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_969457_973180_973293_975427
transcript_126973.known	chr7	-	714	2	FSM	ENSG00000240230.6	ENST00000466146.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAACCAGAACTCACCAAC	-974228	True	NA	NA	False	AATAGA	-40	NA	975549	972700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_973293_975427
transcript_126985.known	chr7	-	621	5	FSM	ENSG00000146540.15	ENST00000491163.1	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_4	339.416687126605	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTAGTGGGTTCAGCGC	-1124965	True	NA	NA	False	NA	NA	NA	1138260	997632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138217
transcript_126986.known	chr7	-	1147	4	FSM	ENSG00000146540.15	ENST00000412051.5	1147	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	384.299651603046	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCAGCAGCCGTGGGTC	-1027285	True	NA	-38	True	AATAAA	-7	NA	1028339	997015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1028257
transcript_12699.known	chr1	+	607	2	FSM	ENSG00000197965.12	ENST00000464954.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATAAAATAAGTTCAGCAT	167710831	True	NA	NA	False	NA	NA	NA	167721949	167765896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167722243_167765582
transcript_126991.known	chr7	-	1294	5	FSM	ENSG00000146540.15	ENST00000357429.10	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_4	150.157209284137	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGCGTCCCCTGCCTGTG	-1124962	True	NA	-8	True	AATAAA	-37	NA	1138257	996985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_997805_1000469_1000552_1009949_1010144_1127256_1127387_1138188
transcript_126994.known	chr7	+	1714	3	FSM	ENSG00000229043.3	ENST00000423008.2	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTAACATGGTGAAACCC	1159516	True	NA	-46	True	NA	NA	NA	1160373	1165580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1160624_1163451_1163496_1164160
transcript_126995.known	chr7	+	1939	4	FSM	ENSG00000229043.3	ENST00000662926.1	1939	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	26.5873821368124	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCTCTACTACAAATAAAAAA	1159574	True	NA	-19	True	NA	NA	NA	1160431	1165607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1160624_1162961_1163218_1163451_1163496_1164160
transcript_126996.known	chr7	-	878	5	FSM	ENSG00000178381.12	ENST00000316495.8	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	17.4122801493658	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTGTTCTCATTGCC	-1157951	True	NA	-4	True	AATAAA	-19	NA	1160196	1152906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1153225_1155452_1155585_1157655_1157751_1158157_1158258_1159963
transcript_126997.known	chr7	-	544	2	FSM	ENSG00000178381.12	ENST00000471448.2	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTGTTCTCATTGCCC	-1155658	False	NA	-3	True	AATAAA	-20	NA	1155677	1152905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1153225_1155452
transcript_1270.known	chr1	+	3878	15	FSM	ENSG00000069424.16	ENST00000666163.1	3878	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	7.02764221499934	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGACTTTTTGCTCCTCTC	5992206	True	NA	16	True	AATAAA	-24	NA	5992638	6101188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_127002.known	chr7	+	588	4	FSM	ENSG00000230487.9	ENST00000651857.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	6.59966329107444	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGCAGTAGTTGTAGCC	1569663	True	NA	NA	False	AATAAA	-20	NA	1570141	1579485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1579286
transcript_127005.known	chr7	+	471	3	FSM	ENSG00000230487.9	ENST00000524978.2	471	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTGATTGCTGTGTTT	1569755	False	NA	NA	False	NA	NA	NA	1570233	1576062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1570280_1574714_1574864_1575786
transcript_127008.known	chr7	-	774	3	FSM	ENSG00000157778.9	ENST00000404674.7	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_2	184.5	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGAATGTGTATCCCAAAAT	-1565597	True	NA	-21	True	ATTAAA	-2	NA	1570045	1567350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1567851_1569123_1569361_1570008
transcript_127009.known	chr7	-	1007	3	FSM	ENSG00000157778.9	ENST00000252329.3	1007	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	246	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGGAGGGAGGAACTTTG	NA	False	NA	NA	False	NA	NA	NA	1571005	1567612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1567851_1569123_1569361_1570473
transcript_12701.known	chr1	+	3302	20	FSM	ENSG00000143164.16	ENST00000367843.7	3302	20	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	33.8371527848792	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGACTTTTTATTTAATGC	167933268	True	NA	15	True	ATTAAA	-29	NA	167936660	168075843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168022987_168023048_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_127010.known	chr7	+	5701	4	FSM	ENSG00000230487.9	ENST00000437621.6	5701	4	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_3	6.59966329107444	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAACTCTCCATCCTTCT	1569594	True	NA	NA	False	AATAAA	-19	NA	1570072	1589626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_1570280_1574714_1574864_1575786_1575889_1584383
transcript_127012.known	chr7	-	2695	19	FSM	ENSG00000002822.16	ENST00000265854.12	2695	19	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_18	22.9793922708109	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCCCACTCGCCCTGTGT	-2228532	False	4413	-7	True	AATAAA	-16	NA	2232945	1815794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871
transcript_127013.known	chr7	-	2762	19	FSM	ENSG00000002822.16	ENST00000399654.6	2762	19	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_18	42.6992063418305	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCACTCGCCCTGTGTA	-2228561	False	NA	-6	True	AATAAA	-17	NA	2232974	1815793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149151_2149239_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230765_2232871
transcript_12702.known	chr1	+	3186	19	FSM	ENSG00000143164.16	ENST00000312263.10	3186	19	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	19.255270242164	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGAATTTGACTTTTT	167933315	True	NA	6	True	ATTAAA	-20	NA	167936707	168075834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_167937009_167951799_167951862_167966628_167966722_167974829_167975016_167987494_167987609_167991203_167991340_167993225_167993441_168002481_168002576_168003869_168003990_168004532_168004794_168038370_168038489_168043024_168043141_168044584_168044672_168044899_168045228_168063620_168063760_168065589_168065747_168066376_168066466_168068357_168068464_168075370
transcript_127021.known	chr7	-	5697	24	FSM	ENSG00000286192.1	ENST00000651235.1	5697	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	82.5719597952201	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCTAGACACTCCCACTC	-2237802	True	NA	-16	True	AATAAA	-7	NA	2242215	1815803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_1816229_1898199_1898391_1936686_1936898_1957628_1957720_1980452_1980542_2002064_2002122_2014501_2014643_2069193_2069339_2149095_2149239_2200261_2200558_2213211_2213274_2215884_2216000_2216156_2216288_2217961_2218044_2219331_2219457_2222574_2222755_2225409_2225551_2229983_2230144_2230548_2230728_2232871_2232971_2234197_2235565_2238014_2238938_2239417_2239708_2242161
transcript_127024.nic	chr7	-	292	2	ISM	ENSG00000002822.16	ENST00000265854.12	2695	19	-1	414716	-1	-7936	5prime_fragment	FALSE	canonical	3	149	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTCTGTGTCCTGTTGGC	-2228533	False	4413	NA	False	AATAAA	-17	NA	2232946	2230510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_2230728_2232871
transcript_127026.nnic	chr7	-	1678	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237797	True	NA	-1	True	AATAAA	-29	NA	2242210	2234194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_127027.known	chr7	-	1819	3	FSM	ENSG00000122687.19	ENST00000467199.5	1819	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	178	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAAAATAATAGAGATT	-2237756	True	NA	-37	True	NA	NA	NA	2242169	2234230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2239417_2239708_2241974
transcript_127030.nnic	chr7	-	1580	3	NNC	ENSG00000122687.19	novel	1704	3	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_2	165	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTGATGTGGTGTGTT	-2237797	True	NA	-19	True	CATAAA	-16	NA	2242210	2234292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_2235565_2239417_2239677_2242161
transcript_127033.known	chr7	-	1704	3	FSM	ENSG00000122687.19	ENST00000242257.14	1704	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	105.5	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATGCTTTGAAGTTTT	-2237792	True	NA	-1	True	AATAAA	-29	NA	2242205	2234194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2239417_2239708_2242161
transcript_127034.known	chr7	-	2511	4	FSM	ENSG00000122687.19	ENST00000486040.1	2511	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	70.6179077068196	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCAGTGATGTGGTGTG	-2237776	True	NA	-21	True	CATAAA	-14	NA	2242189	2234294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2235565_2238014_2238938_2239417_2239708_2242161
transcript_127047.known	chr7	+	712	5	FSM	ENSG00000106268.16	ENST00000397046.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	473.921604804001	6356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234714	True	NA	15	True	AATAAA	-15	NA	2242258	2251145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242293_2242924_2242976_2244562_2244727_2249856_2250003_2250828
transcript_127050.known	chr7	+	783	5	FSM	ENSG00000106268.16	ENST00000397048.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	514.536927732111	5240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234716	True	NA	15	True	AATAAA	-15	NA	2242260	2251145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242293_2242924_2243049_2244562_2244727_2249856_2250003_2250828
transcript_127058.known	chr7	+	658	4	FSM	ENSG00000106268.16	ENST00000356714.6	658	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	362.409528940212	7727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2234681	True	NA	15	True	AATAAA	-15	NA	2242225	2251145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242257_2244562_2244727_2249856_2250003_2250828
transcript_12706.known	chr1	-	2223	6	FSM	ENSG00000143158.11	ENST00000271373.9	2223	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	187.14016137644	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTCTTGTCAGTCAAAT	-167937050	False	NA	48	True	ATTAAA	-26	NA	167937072	167916674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732_167935899_167936938
transcript_127072.known	chr7	+	698	4	FSM	ENSG00000106268.16	ENST00000339737.6	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	391.033957036413	6306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2242976_2244562_2244727_2249856_2250003_2250828
transcript_127073.known	chr7	+	771	4	FSM	ENSG00000106268.16	ENST00000343985.8	771	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	478.882263424135	5293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTTTG	2235360	False	NA	15	True	AATAAA	-15	NA	2242904	2251145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2243049_2244562_2244727_2249856_2250003_2250828
transcript_127078.nnic	chr7	-	398	3	NNC	ENSG00000106266.11	novel	583	4	NA	NA	228	-59011	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGTGGTGTGACCCTT	-2353685	True	NA	-3	True	ATTAAA	-16	NA	2354081	2337124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_2337282_2349994_2350153_2353998
transcript_127083.known	chr7	-	583	4	FSM	ENSG00000106266.11	ENST00000447136.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	78.291478179656	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGTAAAGCCAGGCGTGC	-2354057	False	NA	NA	False	NA	NA	NA	2354318	2275115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2275230_2278099_2278306_2337115_2337282_2354221
transcript_127084.known	chr7	-	4704	11	FSM	ENSG00000106266.11	ENST00000222990.8	4704	11	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_10	16.5819178625393	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACGTGTATGAAAGTTG	-2311631	True	NA	NA	False	AATAAA	-20	NA	2314441	2251769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2255170_2256873_2257024_2257364_2257515_2257734_2257804_2263229_2263363_2264297_2264459_2269558_2269640_2271849_2271972_2275111_2275230_2278099_2278306_2314327
transcript_127089.known	chr7	+	15979	2	FSM	ENSG00000136213.10	ENST00000258711.7	15979	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCGGGACTGAACAAAACC	2401699	True	NA	NA	False	AGTAAA	-17	NA	2403587	2448483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2403646_2432562
transcript_12709.known	chr1	-	2177	5	FSM	ENSG00000143158.11	ENST00000367846.8	2177	5	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	36.9425229241318	1563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTGTTTCACTTCCTT	-167931477	True	NA	-6	True	ATTAAA	-12	NA	167936040	167916728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_167918360_167919978_167920091_167920546_167920632_167924496_167924538_167935732
transcript_127091.nnic	chr7	+	1566	2	NNC	ENSG00000136213.10	novel	15979	2	NA	NA	5	686	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGAAGGGAATGCTGGAG	2401704	True	NA	28	True	AATATA	-22	NA	2403592	2434061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_2403660_2432562
transcript_127092.known	chr7	-	2779	14	FSM	ENSG00000106009.16	ENST00000340611.9	2779	14	0	0	0	0	multi-exon	TRUE	canonical	3	452	junction_13	75.0334836498949	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTGTCATTCATTCGC	-2550497	True	NA	0	True	NA	NA	NA	2555524	2537809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2538765_2539178_2539352_2539543_2539643_2539785_2539889_2540978_2541053_2541297_2541485_2541717_2541837_2542119_2542212_2543203_2543324_2543589_2543963_2544908_2545057_2547323_2547479_2554304_2554448_2555486
transcript_127096.nic	chr7	-	1435	4	ISM	ENSG00000106009.16	ENST00000469750.5	5226	11	-75	6322	-75	-2022	5prime_fragment	FALSE	canonical	3	452	junction_3	85.0581500438899	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAACAAGAAGGAACGAAT	-2555747	False	NA	NA	False	NA	NA	NA	2555769	2544202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_2545057_2547323_2547479_2554304_2554448_2555486
transcript_127097.nic	chr7	-	672	2	ISM	ENSG00000106009.16	ENST00000340611.9	2779	14	-1	16005	-1	-11634	5prime_fragment	FALSE	canonical	3	452	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAATTAGCTGTGCCTGG	-2550498	True	NA	NA	False	NA	NA	NA	2555525	2553814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_2554448_2555486
transcript_12710.known	chr1	-	522	1	FSM	ENSG00000224837.1	ENST00000443090.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGGAACTCCTAAATAAA	-168056411	False	NA	NA	False	CATAAA	-17	NA	168056422	168055900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_168055900_168056400
transcript_127100.nnic	chr7	-	894	3	FSM	ENSG00000289352.1	ENST00000690042.1	905	3	6	5	6	-5	multi-exon	FALSE	canonical	1	1	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGCGGGTCCACTCCTT	-2622181	True	NA	NA	False	TATAAA	-32	NA	2622230	2614587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2614977_2617649_2617802_2621877
transcript_127103.known	chr7	+	4805	14	FSM	ENSG00000136295.15	ENST00000258796.12	4805	14	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_5	102.710600502681	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTTCCTGAGCTGCT	2622786	True	NA	18	True	AATAAA	-14	NA	2631985	2664802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_2632279_2646852_2647023_2647141_2647254_2647417_2647639_2647958_2648055_2649566_2649640_2649912_2649989_2652186_2652243_2652917_2653011_2656091_2656185_2656397_2656535_2658285_2658460_2658939_2659016_2661667
transcript_127104.known	chr7	-	4287	25	FSM	ENSG00000198286.10	ENST00000396946.9	4287	25	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_13	15.9756759550957	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCGACCCTTTGTTTGT	-3042254	True	NA	-13	True	ATTAAA	-18	NA	3043867	2906141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_2906843_2910049_2910166_2912171_2912297_2913286_2913467_2915236_2915373_2917289_2917386_2918490_2918588_2919371_2919613_2922633_2922761_2923131_2923334_2924232_2924366_2926738_2926792_2928597_2928699_2929991_2930075_2932534_2932587_2934452_2934630_2937036_2937235_2937906_2938033_2938678_2938832_2939748_2939929_2944211_2944538_2945818_2945957_2947574_2947788_2958499_2958632_3043666
transcript_127105.known	chr7	+	476	1	FSM	ENSG00000224593.1	ENST00000430569.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTGTTAAAAACAAACAA	NA	False	NA	NA	False	NA	NA	NA	3338125	3338601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_3338100_3338600
transcript_127107.known	chr7	+	323	1	FSM	ENSG00000286874.1	ENST00000667321.1	323	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTGTTTCAGAGTTTTT	4642199	True	NA	NA	False	AATAAA	-38	NA	4642247	4642570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4642200_4642600
transcript_127109.known	chr7	+	5529	17	FSM	ENSG00000242802.9	ENST00000649063.2	5529	17	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_7	11.5101857065818	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGGTCCACACTGCCT	4772305	True	NA	17	True	AATAAA	-17	NA	4775622	4794397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4775757_4781174_4781313_4781567_4781755_4783315_4783461_4783688_4783799_4784202_4784372_4784907_4785049_4785414_4785453_4785521_4785685_4786249_4786429_4787633_4787777_4788153_4788295_4788839_4788952_4789831_4789930_4790458_4790592_4790672_4790888_4791114
transcript_127119.known	chr7	-	567	2	FSM	ENSG00000157927.17	ENST00000457174.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACAGTGAGAAGCCCCT	-4881787	False	422	NA	False	NA	NA	NA	4882209	4877737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_4878204_4882108
transcript_127126.nic	chr7	+	1053	8	NIC	ENSG00000272968.5	novel	766	6	NA	NA	-84	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	26.3694319008869	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGCTGTTTCCTTTTGG	5044138	True	NA	3	True	AATAAA	-16	NA	5045826	5073221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_5045959_5046254_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694_5063756_5072361_5072498_5072921
transcript_127129.nic	chr7	+	2315	7	NIC	ENSG00000196204.12	novel	807	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	94.0911201383472	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970001	True	NA	13	True	ATTAAA	-16	NA	4973987	4998165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4986566_4986632_4989062_4989178_4996609
transcript_127131.nic	chr7	+	2360	7	NIC	ENSG00000196204.12	novel	807	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	86.9418707464297	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGTCTGTGTCATCAA	4970001	True	NA	15	True	ATTAAA	-18	NA	4973987	4998167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4995474_4995583_4996609
transcript_127139.known	chr7	+	2201	6	FSM	ENSG00000196204.12	ENST00000404006.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.2910819216967	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACCTAGTCTGTGTCATC	4970050	True	NA	13	True	ATTAAA	-16	NA	4974036	4998165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062_4989178_4996609
transcript_127149.known	chr7	+	4125	6	FSM	ENSG00000146587.18	ENST00000353796.7	4125	6	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	23.5423023512995	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAAAAGAATATAAATCT	5044132	True	NA	NA	False	AGTAAA	-10	NA	5045820	5067257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5045959_5046254_5046397_5048032_5048092_5057294_5057422_5057683_5057780_5063694
transcript_12715.known	chr1	+	2998	7	FSM	ENSG00000143155.13	ENST00000367833.7	2998	7	0	0	0	0	multi-exon	FALSE	canonical	1	111	junction_6	106.981955903269	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGTTTTACTATTTCAT	168172909	True	NA	12	True	AATAAA	-18	NA	168178961	168202109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168196546_168196643_168198918_168198982_168199902
transcript_127153.nic	chr7	+	694	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-49	8988	0	-191	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTATGTTGGT	4970001	True	NA	NA	False	AAGAAA	-40	NA	4973987	4989177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_127154.nic	chr7	+	885	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-49	8797	0	0	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTTGTGTGGTGTTAG	4970001	True	NA	NA	False	GATAAA	-11	NA	4973987	4989368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_127155.nic	chr7	+	1237	5	ISM	ENSG00000196204.12	ENST00000404006.5	2201	6	-49	8445	0	352	5prime_fragment	FALSE	canonical	0	0	junction_3	89.9235786654424	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTAGAGATCATCCCT	4970001	True	NA	3	True	AGTAAA	-15	NA	4973987	4989720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4989062
transcript_127156.known	chr7	+	1360	5	FSM	ENSG00000196204.12	ENST00000403969.5	1360	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.025482284724	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGAGTTCACAGTGAACAA	4970063	True	NA	NA	False	NA	NA	NA	4974049	4997452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_4974162_4976300_4976437_4983670_4983774_4984909_4985076_4996609
transcript_127158.nic	chr7	+	642	5	NIC	ENSG00000196204.12	novel	807	7	NA	NA	0	-191	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	89.9235786654424	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGCAAACTATGTTGGT	4970001	True	NA	NA	False	AAGAAA	-40	NA	4973987	4989177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_4974162_4976300_4976437_4983670_4983774_4984961_4985076_4989062
transcript_127172.known	chr7	+	514	3	FSM	ENSG00000273313.1	ENST00000498308.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCTGTTTCCTTTTGGGA	5072104	True	NA	5	True	AATAAA	-18	NA	5072124	5073223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5072201_5072361_5072498_5072921
transcript_127185.nnic	chr7	-	1145	3	Antisense	novelGene_ENSG00000164638.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTGAACACCCTTTGC	NA	False	NA	NA	False	AATAAA	-27	NA	5296553	5289867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_5290593_5290712_5290845_5296265
transcript_127187.known	chr7	+	632	1	FSM	ENSG00000272953.1	ENST00000609130.1	632	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAATGGCGTTTGCAT	5425687	True	NA	4	True	AATAAA	-23	NA	5425769	5426401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5425800_5426400
transcript_127188.known	chr7	+	942	1	FSM	ENSG00000273084.1	ENST00000608012.1	942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTCTGAGCACAGGCTTT	5428600	False	NA	NA	False	NA	NA	NA	5428730	5429672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5428700_5429700
transcript_127194.known	chr7	-	1687	5	FSM	ENSG00000075624.17	ENST00000473257.3	1687	5	0	0	0	0	multi-exon	FALSE	canonical	1	247	junction_4	13034.1741395456	2593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5530523
transcript_127198.known	chr7	-	425	2	FSM	ENSG00000075624.17	ENST00000646584.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCGAGTAGCTGGGATT	-5562653	True	NA	NA	False	NA	NA	NA	5562716	5561851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5561950_5562389
transcript_127199.known	chr7	-	1812	6	FSM	ENSG00000075624.17	ENST00000646664.1	1812	6	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_5	1574.97801889423	22698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAAGTGTGACTTTGTGG	-4934653	True	NA	-5	True	AATAAA	-21	NA	5530601	5527147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529160_5529401_5529534_5529664_5530523
transcript_1272.known	chr1	+	4001	15	FSM	ENSG00000069424.16	ENST00000352527.6	4001	15	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	6.1295537008357	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGGTCTCTGTGACTTTT	NA	False	NA	6	True	AATAAA	-14	NA	6026162	6101178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6087466_6087512_6089007_6089052_6090388_6090476_6094399_6094486_6095322_6095444_6095529_6095625_6096635_6096757_6097268_6097358_6098484
transcript_127200.known	chr7	-	811	3	FSM	ENSG00000075624.17	ENST00000676319.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13237.5	4155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGTGTGACTTTGTGGT	-4934656	True	NA	-4	True	AATAAA	-22	NA	5530604	5527146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527784_5529570_5529664_5530523
transcript_127201.known	chr7	-	2245	5	FSM	ENSG00000075624.17	ENST00000462494.5	2245	5	0	0	0	0	multi-exon	FALSE	canonical	3	26475	junction_4	1755.59681803653	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-4934653	True	NA	-13	True	AATAAA	-13	NA	5530601	5527155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5529401_5529534_5529664_5530523
transcript_127202.known	chr7	-	1845	7	FSM	ENSG00000075624.17	ENST00000425660.5	1845	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	13718.430522476	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGAGGCCAAGTGTGA	-4934653	True	NA	-13	True	AATAAA	-13	NA	5530601	5527155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5527892_5528003_5528186_5528280_5528720_5529018_5529060_5529160_5529401_5529534_5529664_5530523
transcript_127203.known	chr7	+	2784	5	FSM	ENSG00000075618.18	ENST00000382361.8	2784	5	0	0	0	0	multi-exon	FALSE	canonical	1	391	junction_4	374.07778268697	886	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCCTGTGTGTGTCTT	5546045	True	NA	32	True	AATAAA	-22	NA	5592815	5606655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5593769_5603256_5603414_5603495_5603618_5603862_5604031_5605271
transcript_127206.known	chr7	-	5639	17	FSM	ENSG00000011275.19	ENST00000425013.6	5639	17	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_14	31.5693061968425	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	-5777659	True	NA	-6	True	AATAAA	-19	NA	5781696	5620046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741645_5752845_5752980_5761002_5761139_5781540
transcript_127207.known	chr7	-	5777	17	FSM	ENSG00000011275.19	ENST00000389902.8	5777	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_14	40.2103842309421	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCAGCTTCGTCTCTCCA	-5777626	True	NA	-6	True	AATAAA	-19	NA	5781663	5620046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5623180_5624055_5624126_5641153_5641377_5652412_5652511_5711760_5711840_5712714_5712864_5715052_5715191_5716715_5716767_5721032_5721173_5725323_5725439_5729431_5729597_5730714_5730818_5739275_5739353_5740972_5741816_5752845_5752980_5761002_5761139_5781540
transcript_12721.known	chr1	+	727	5	FSM	ENSG00000143155.13	ENST00000367830.3	727	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	174.754649437433	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAACAAGTATGGTTATTC	168173002	True	NA	NA	False	AATAAA	-27	NA	168179054	168192395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168179182_168183901_168184082_168184778_168184879_168191368_168191501_168192207
transcript_127215.nnic	chr7	+	1154	6	FSM	ENSG00000235944.9	ENST00000690822.1	1137	6	-18	1	15	-1	multi-exon	FALSE	canonical	3	5	junction_5	4.67332857821917	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	5822747	True	NA	13	True	AGTAAA	-25	NA	5823142	5854437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5823527_5831180_5831284_5833526_5833569_5839948_5840076_5840689_5840857_5854106
transcript_127216.nnic	chr7	+	1056	5	FSM	ENSG00000235944.9	ENST00000686456.1	1068	5	10	2	10	-1	multi-exon	TRUE	canonical	2	3	junction_1	5.93717104351896	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	NA	False	NA	13	True	AGTAAA	-25	NA	5823137	5854437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5823527_5833526_5833569_5839948_5840076_5840689_5840857_5854106
transcript_127219.nnic	chr7	+	1014	4	NIC	ENSG00000235944.9	novel	1068	5	NA	NA	10	-1	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	6.64997911442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	NA	False	NA	13	True	AGTAAA	-25	NA	5823137	5854437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_5823527_5839948_5840076_5840689_5840857_5854106
transcript_127220.nnic	chr7	+	806	3	FSM	ENSG00000235944.9	ENST00000691068.1	857	3	49	2	3	-1	multi-exon	FALSE	canonical	1	1	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTCTGTGGACTG	5822823	True	NA	13	True	AGTAAA	-25	NA	5823218	5854437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5823527_5840689_5840857_5854106
transcript_127230.known	chr7	+	2379	15	FSM	ENSG00000122674.12	ENST00000325974.9	2379	15	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_8	254.686081284392	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	5898709	False	NA	NA	False	NA	NA	NA	5898732	5926550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5898920_5900283_5900382_5900472_5900567_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_12724.known	chr1	+	354	1	FSM	ENSG00000237049.1	ENST00000450455.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	509	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAACTGTTGCTGGG	NA	False	NA	NA	False	AAAAAG	-9	NA	168210615	168210969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168210600_168211000
transcript_127243.known	chr7	+	2218	14	FSM	ENSG00000122674.12	ENST00000628813.2	2218	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	462.732788049534	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGCAAACATGAGAAGGT	5898776	False	NA	NA	False	NA	NA	NA	5898799	5926550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5898920_5900283_5900382_5900854_5900933_5901656_5901705_5902660_5902745_5905093_5905270_5910034_5910117_5911860_5911923_5912842_5912955_5918866_5918901_5919848_5919967_5923386_5923546_5923834_5923963_5925631
transcript_12725.nnic	chr1	+	1305	9	NNC	ENSG00000213064.10	novel	11040	8	NA	NA	-4	10168	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_8	23.687747360186	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATGAAATATCAGTTT	168222872	True	NA	NA	False	AATAAA	-18	NA	168225933	168263189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500_168243070_168263042
transcript_127258.known	chr7	+	2062	3	FSM	ENSG00000122674.12	ENST00000478672.1	2062	3	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_2	208.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGGA	5898757	False	NA	NA	False	NA	NA	NA	5898780	5902297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_5898920_5900283_5900382_5900472
transcript_127261.known	chr7	-	2765	15	FSM	ENSG00000122512.16	ENST00000642456.1	2765	15	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	30.9271692192863	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAGTGATCTTGAGAA	-6006483	True	NA	-34	True	AATACA	-12	NA	6009075	5973273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003689_6003793_6003971_6004059_6005891_6006027_6008996
transcript_127267.known	chr7	-	2730	14	FSM	ENSG00000122512.16	ENST00000441476.6	2730	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	33.7889376526151	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGGAGCATTGCTTGCAA	-6006514	True	NA	-2	True	AATACA	-44	NA	6009106	5973241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_5973543_5977587_5977758_5978595_5978697_5982823_5982992_5986758_5987621_5989799_5989956_5991972_5992058_5995533_5995634_5997325_5997424_5999107_5999276_6002452_6002637_6003971_6004059_6005891_6006032_6008996
transcript_127269.known	chr7	-	4411	15	FSM	ENSG00000086232.13	ENST00000199389.11	4411	15	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_8	40.0731474039305	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGATGCTGGGCATGGTG	-6049749	True	NA	-24	True	AATAAA	-25	NA	6059175	6022246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6024802_6026727_6026962_6028614_6028698_6028917_6029033_6037423_6037525_6038559_6038672_6040891_6041220_6042932_6042994_6044561_6044662_6046070_6046152_6046991_6047092_6048806_6048845_6049911_6050046_6054545_6054705_6058965
transcript_12727.known	chr1	+	11040	8	FSM	ENSG00000213064.10	ENST00000271375.7	11040	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	9.71638632750397	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATCTAGTGTTGTCTCTT	168222942	True	NA	12	True	AATAAA	-22	NA	168226003	168253021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168235100_168235183_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_127272.known	chr7	+	1107	5	FSM	ENSG00000106305.10	ENST00000400479.6	1107	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	350.080347920302	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAACTGATTTTAAAGGG	5997426	True	NA	NA	False	NA	NA	NA	6009254	6023695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6009379_6014901_6015053_6015145_6015353_6017813_6018046_6023302
transcript_127280.nnic	chr7	+	1131	4	NIC	ENSG00000106305.10	novel	1198	4	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	108	junction_1	284.966664717121	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	NA	False	NA	16	True	AATAAA	-17	NA	6009218	6023834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_6009379_6015145_6015353_6017813_6018046_6023302
transcript_127281.known	chr7	+	860	3	FSM	ENSG00000106305.10	ENST00000395236.2	860	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	287.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCAGTAAGGGGACTT	5997487	True	NA	-71	True	TTTAAA	-36	NA	6009315	6023747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6009499_6017813_6018046_6023302
transcript_127284.known	chr7	+	1198	4	FSM	ENSG00000106305.10	ENST00000223029.8	1198	4	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_1	9.7410927974683	2950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTTTCATTTTATTTAAA	5997443	True	NA	16	True	AATAAA	-17	NA	6009271	6023834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6009499_6015145_6015353_6017813_6018046_6023302
transcript_127286.known	chr7	-	4482	13	FSM	ENSG00000008256.16	ENST00000350796.8	4482	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	9.60432483600776	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTAAGACTTGGTTCT	-6271445	True	NA	NA	False	AATAAA	-21	NA	6272624	6161778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6165017_6165272_6165428_6165544_6165617_6165733_6165811_6170534_6170647_6170829_6170979_6171201_6171315_6173652_6173734_6177822_6177942_6187049_6187117_6187656_6187722_6190448_6190532_6272473
transcript_127287.known	chr7	-	558	2	FSM	ENSG00000178397.13	ENST00000530143.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACAGAGTGTTTTGCTCG	-6346707	True	NA	NA	False	NA	NA	NA	6348975	6330827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6331236_6348825
transcript_127288.known	chr7	-	207	2	FSM	ENSG00000286075.2	ENST00000578372.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCTCCCAGACTGACGA	-6346490	False	NA	NA	False	NA	NA	NA	6348758	6331214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6331236_6348572
transcript_127290.known	chr7	+	2309	6	FSM	ENSG00000136238.18	ENST00000348035.9	2309	6	0	0	0	0	multi-exon	FALSE	canonical	3	3568	junction_1	63.1803767003648	1963	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGGTAATACTGGTGTT	6335317	True	NA	14	True	AATAAA	-14	NA	6374526	6403967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6374771_6387211_6387284_6391923_6392042_6400125_6400189_6401867_6402028_6402315
transcript_127291.known	chr7	-	2839	15	FSM	ENSG00000164535.15	ENST00000297056.11	2839	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_12	13.0188246749992	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGTGTACAGCTGC	-6445328	True	NA	-14	True	AATAAA	-16	NA	6447954	6409128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6410036_6410129_6410381_6412810_6412884_6412965_6413035_6416626_6416755_6416840_6416922_6421726_6421805_6424751_6424836_6425987_6426115_6430479_6430608_6432836_6432960_6434761_6435021_6436361_6436534_6445952_6446105_6447747
transcript_127305.known	chr7	-	2786	5	FSM	ENSG00000136240.10	ENST00000258739.9	2786	5	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_2	49.7543967906355	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTATTGAGGTGTTTG	-6473930	True	NA	-11	True	AATAAA	-18	NA	6484152	6461088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6463176_6466070_6466324_6469595_6469755_6474183_6474285_6483966
transcript_127308.nic	chr7	-	754	3	ISM	ENSG00000164535.15	ENST00000479922.6	555	4	-55	736	-16	-736	5prime_fragment	FALSE	canonical	3	119	junction_1	12.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACGTATTGATGTAGATT	-6445361	True	NA	NA	False	AATACA	-16	NA	6447987	6436171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_6436534_6445952_6446105_6447747
transcript_127309.known	chr7	-	382	2	FSM	ENSG00000136240.10	ENST00000462052.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	1015	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTAATATGCTGTTC	-6473921	True	NA	NA	False	ATTAAA	-14	NA	6484143	6474079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6474285_6483966
transcript_12731.known	chr1	+	1073	7	FSM	ENSG00000213064.10	ENST00000630869.1	1073	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	25.3355262208798	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCGCCTGACTGTGGAA	168222946	True	NA	NA	False	NA	NA	NA	168226007	168243140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168226143_168231513_168231601_168231833_168231920_168236588_168236625_168236711_168236771_168239130_168239161_168242500
transcript_127311.nic	chr7	-	1095	5	ISM	ENSG00000215045.9	ENST00000435185.5	3215	21	27487	3660	27487	-3660	internal_fragment	FALSE	canonical	2	5	junction_4	1.4790199457749	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTTGTTTGTTTGTTTA	-6503360	True	NA	-3	True	TATAAA	-17	NA	6503699	6501386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_6501900_6501988_6502119_6502785_6502873_6503007_6503164_6503490
transcript_127314.known	chr7	+	1461	9	FSM	ENSG00000136247.15	ENST00000396707.6	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.821294387833	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574095	True	NA	12	True	NA	NA	NA	6577433	6588978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6577589_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_127315.known	chr7	+	1706	8	FSM	ENSG00000136247.15	ENST00000335965.11	1706	8	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	54.3454558489353	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574115	True	NA	NA	False	NA	NA	NA	6577453	6589374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_127320.known	chr7	+	1348	8	FSM	ENSG00000136247.15	ENST00000405731.7	1348	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	97.3109889551461	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGTTCCCGTTTATTT	6574095	True	NA	25	True	AAGAAA	-31	NA	6577433	6588931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_127324.known	chr7	+	1552	8	FSM	ENSG00000136247.15	ENST00000396713.6	1552	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	87.6665761361111	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGCTTGTTTGTTTTGATT	6574095	True	NA	12	True	NA	NA	NA	6577433	6588978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577721_6578565_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_127326.known	chr7	+	1485	8	FSM	ENSG00000136247.15	ENST00000396709.5	1485	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	128.286191535861	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGCCTTTGAGCTGTAGT	6574129	True	NA	13	True	AAGAAA	-19	NA	6577467	6588919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577721_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_127327.known	chr7	+	1942	8	FSM	ENSG00000136247.15	ENST00000396706.2	1942	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	109.404883672661	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGGGCTTGTACATCA	6574166	False	NA	NA	False	NA	NA	NA	6577504	6589374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577721_6578500_6578721_6580554_6580679_6581606_6581681_6582072_6582252_6583305_6583432_6585015_6585261_6588616
transcript_127334.known	chr7	+	1604	6	FSM	ENSG00000136247.15	ENST00000474097.5	1604	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	125.295490740888	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGTACAGTTGAAAAA	6574129	True	NA	NA	False	ACTAAA	-36	NA	6577467	6584320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6577499_6578565_6578747_6580554_6580679_6581606_6581681_6582072_6582252_6583305
transcript_127335.known	chr7	+	2178	6	FSM	ENSG00000146576.13	ENST00000344417.10	2178	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	11.2356575241505	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGACTTTATGGAATGTA	6588591	True	NA	12	True	AATAAA	-17	NA	6590020	6608726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6590476_6591645_6591868_6594434_6594601_6599828_6600357_6602100_6602141_6607959
transcript_127337.known	chr7	+	532	3	FSM	ENSG00000228010.6	ENST00000430844.5	532	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCACCTTTGGAAGCTAAT	6663390	True	NA	NA	False	NA	NA	NA	6663973	6673601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_6664044_6665043_6665109_6673204
transcript_127346.known	chr7	-	1814	15	FSM	ENSG00000146574.16	ENST00000316731.13	1814	15	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_3	351.54122033104	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTGGTGTTGAGTC	-6826263	False	NA	-2	True	AATAAA	-20	NA	6826275	6798936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6799280_6800947_6801076_6801364_6801524_6804937_6805056_6806003_6806038_6811951_6812064_6812975_6813038_6814763_6814846_6819765_6819942_6822280_6822365_6823312_6823361_6824088_6824167_6824454_6824549_6824639_6824738_6826077
transcript_127353.known	chr7	-	631	4	FSM	ENSG00000146574.16	ENST00000496187.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_2	175.518913194245	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTACTGATTGACAAATT	-6826193	False	NA	NA	False	NA	NA	NA	6826205	6823855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6824167_6824454_6824549_6824639_6824738_6826077
transcript_127354.known	chr7	-	748	3	FSM	ENSG00000146574.16	ENST00000464543.1	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	1599	junction_1	214.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTGAATGCCTTACTT	-6826204	False	NA	NA	False	TTTAAA	-12	NA	6826216	6824037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_6824549_6824639_6824738_6826077
transcript_127369.nnic	chr7	+	2132	5	NNC	ENSG00000106392.11	novel	6275	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	3	43	junction_1	232.367166355318	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7176075	True	NA	28	True	AATAAA	-18	NA	7182618	7244350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_7182821_7215041_7215240_7234302_7234540_7238254_7238923_7243523
transcript_127373.known	chr7	+	6275	4	FSM	ENSG00000106392.11	ENST00000436587.7	6275	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	66.5482281256734	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTCATCTGATTATTT	7176000	True	NA	15	True	AATAAA	-15	NA	7182543	7248616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7182821_7234302_7234540_7238254_7238923_7243523
transcript_127379.nnic	chr7	+	1896	4	NNC	ENSG00000106392.11	novel	1777	3	NA	NA	602	0	at_least_one_novel_splicesite	FALSE	canonical	2	35	junction_1	235.777201800532	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	7183211	False	NA	28	True	AATAAA	-18	NA	7183231	7244350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_7183396_7234302_7234540_7238254_7238923_7243523
transcript_127380.known	chr7	+	1777	3	FSM	ENSG00000106392.11	ENST00000223122.4	1777	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_1	53.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGGCCTTGACTATATT	NA	False	NA	28	True	AATAAA	-18	NA	7234257	7244350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7234540_7238254_7238923_7243523
transcript_127387.known	chr7	+	4877	13	FSM	ENSG00000164654.16	ENST00000340080.9	4877	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	83.9740369929235	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTTATGTCTCTGG	7566592	True	NA	NA	False	NA	NA	NA	7566883	7608932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7567073_7567606_7567689_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_127388.known	chr7	+	3095	12	FSM	ENSG00000164654.16	ENST00000405785.5	3095	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	74.2348295435193	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566733	True	NA	16	True	AATAAA	-14	NA	7566874	7607223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7567073_7568025_7568124_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_127389.nic	chr7	+	2872	11	NIC	ENSG00000164654.16	novel	3095	12	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_1	63.3909299505852	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCAGTTTTGATGTTTGA	7566878	False	NA	16	True	AATAAA	-14	NA	7566999	7607223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_7567073_7572435_7573770_7574097_7574197_7583117_7583373_7585635_7585806_7588497_7588564_7589404_7589564_7594979_7595133_7596256_7596462_7605941_7606072_7606995
transcript_127397.known	chr7	+	602	2	FSM	ENSG00000164654.16	ENST00000433635.1	602	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTCCTGATATAGTTCC	7566839	False	NA	NA	False	NA	NA	NA	7566960	7572925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7567073_7572435
transcript_127402.known	chr7	+	559	5	FSM	ENSG00000219545.12	ENST00000463725.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	47.3675785743793	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCGACCACTTACTCTCC	7637955	True	NA	NA	False	NA	NA	NA	7640751	7877443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7640822_7673308_7673454_7676101_7676209_7801669_7801744_7877280
transcript_127416.known	chr7	+	2157	4	FSM	ENSG00000219545.12	ENST00000636849.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	60.4777277644883	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAAAATTTTTGATTA	7637979	True	NA	-4	True	AATAAA	-8	NA	7640775	7879185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7640822_7673321_7673454_7801669_7801744_7877280
transcript_127419.known	chr7	+	569	4	FSM	ENSG00000219545.12	ENST00000482067.3	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	44.5446093508768	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTATTACATTACATCT	7637997	True	NA	NA	False	AATAAA	-18	NA	7640793	7968020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_7640822_7673308_7673454_7801669_7801744_7967698
transcript_127425.nnic	chr7	+	541	3	NNC	ENSG00000219545.12	novel	570	4	NA	NA	-17	-17591	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTTTGTACCATTTTGC	7637938	True	NA	NA	False	AATAAA	-20	NA	7640734	7721231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_7640822_7673318_7673454_7720912
transcript_127426.nnic	chr7	+	622	3	NNC	ENSG00000219545.12	novel	570	4	NA	NA	13	-17521	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATTTTTGACAAGTTT	7637927	True	NA	NA	False	AATACA	-25	NA	7640723	7721301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_7640822_7673318_7673454_7720912
transcript_127428.nnic	chr7	+	955	3	NIC	ENSG00000219545.12	novel	2232	4	NA	NA	13	63569	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	74.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCCATTCAAAATCCCGTT	7637927	True	NA	NA	False	NA	NA	NA	7640723	7802391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_7640822_7673318_7673454_7801669
transcript_127438.known	chr7	-	847	5	FSM	ENSG00000106399.11	ENST00000396682.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	992.863283639797	18843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGGAGAGATTTCTGTGC	-7640912	False	NA	-28	True	ATTAAA	-27	NA	7640972	7636931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640319_7640582_7640722
transcript_127448.known	chr7	-	434	4	FSM	ENSG00000106399.11	ENST00000406109.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_3	1059.41902317575	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGATTTCTGTGCTTTCT	-7640756	False	NA	-23	True	ATTAAA	-32	NA	7640816	7636926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_7637083_7637863_7637973_7639069_7639145_7640722
transcript_12745.known	chr1	+	931	4	FSM	ENSG00000225826.2	ENST00000669234.1	931	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGCGTGCATCTGGTGTG	NA	False	NA	NA	False	AATAAA	-23	NA	168786722	168792886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_168786797_168787036_168787229_168788780_168788890_168792330
transcript_127457.nnic	chr7	-	836	3	Fusion	ENSG00000234141.1_ENSG00000233108.1	novel	692	2	NA	NA	1287	10	multi-exon	FALSE	canonical	1	1	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCCATTCTAATTTGGA	-7968600	True	NA	NA	False	AATAAA	-21	NA	7968616	7949842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_7950507_7958519_7958619_7968543
transcript_12746.known	chr1	-	1678	13	FSM	ENSG00000143156.14	ENST00000525440.5	1678	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	106.171114506515	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTGACTTTGGTTTA	-169367935	False	NA	NA	False	AATAAA	-12	NA	169367946	169132536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169132818_169169446_169169555_169190642_169190706_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_127461.known	chr7	-	1956	15	FSM	ENSG00000003147.19	ENST00000455539.5	1956	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	137.016534083463	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-8262125	False	2544	-6	True	AATAAA	-37	NA	8262153	8113771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8227637_8227852_8228600_8228674_8232589_8232756_8235909_8236006_8262093
transcript_127462.nnic	chr7	-	1714	14	NIC	ENSG00000003147.19	novel	1956	15	NA	NA	16	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_13	98.6843032907277	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-8262162	False	NA	-6	True	AATAAA	-37	NA	8262190	8113771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262093
transcript_127463.nic	chr7	-	1771	14	NIC	ENSG00000003147.19	novel	2440	14	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_13	94.6902143116728	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTACTCTTATTTGGTA	-8262565	True	NA	-6	True	AATAAA	-37	NA	8262593	8113771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8235941_8262439
transcript_127465.known	chr7	-	2309	14	FSM	ENSG00000003147.19	ENST00000265577.11	2309	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_13	107.815972952381	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGAAGCCTCTTGTGAC	-8262178	False	NA	-24	True	NA	NA	NA	8262206	8113254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232753_8235909_8236006_8262093
transcript_127480.known	chr7	-	2304	15	FSM	ENSG00000003147.19	ENST00000650486.1	2304	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	136.651370058172	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGACATTGTTTTT	-8262245	False	NA	-15	True	NA	NA	NA	8262273	8113245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8113512_8113592_8114045_8127872_8128143_8138842_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262093
transcript_127489.known	chr7	-	2440	14	FSM	ENSG00000003147.19	ENST00000406470.6	2440	14	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	38.7389992019876	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCAAGTTTATGGAGTC	NA	False	NA	44	True	ATTAAA	-22	NA	8262612	8113186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_8114045_8127872_8128143_8138839_8138882_8138984_8139048_8141764_8141818_8143874_8143973_8157115_8157215_8158526_8158653_8218304_8218504_8221274_8221399_8228600_8228674_8232589_8232756_8235909_8236006_8262439
transcript_127497.nnic	chr7	+	463	2	NNC	ENSG00000244239.1	novel	429	2	NA	NA	-364	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	33	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTATGTATAGGTATA	8261825	True	NA	8	True	AATAAA	-19	NA	8261868	8262821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_8262090_8262579
transcript_127498.nnic	chr7	+	716	2	NNC	ENSG00000272328.1	novel	543	2	NA	NA	-76	86583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAAGGCTTTGC	NA	False	NA	NA	False	AATAAA	-6	NA	8303664	8427926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_8304156_8427701
transcript_127499.known	chr7	+	543	2	FSM	ENSG00000272328.1	ENST00000606016.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGCTTTTGTACTCCCAA	NA	False	NA	NA	False	NA	NA	NA	8303753	8340523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_8304156_8340382
transcript_1275.known	chr1	+	736	8	FSM	ENSG00000069424.16	ENST00000656198.1	736	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15.7557893473854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAAATCCCCTGATCAC	6025956	True	NA	NA	False	ATTAAA	-15	NA	6026293	6086363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6041830_6041873_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6086157
transcript_127504.known	chr7	+	855	6	FSM	ENSG00000234710.3	ENST00000657272.2	860	6	0	5	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGTTCCATTTTTATT	9621743	False	NA	NA	False	AATAAA	-15	NA	9621763	9769513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_9622043_9716789_9716910_9740953_9741019_9743246_9743303_9760555_9760610_9769232
transcript_12751.known	chr1	-	1590	12	FSM	ENSG00000143156.14	ENST00000472647.5	1590	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	83.8560356250151	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169367935	False	NA	NA	False	AATAAA	-18	NA	169367946	169132530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324470_169367707
transcript_127514.known	chr7	-	502	4	FSM	ENSG00000189043.10	ENST00000470761.5	502	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	6035.37915590691	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTGAAGAAGGAACGTCCA	-10939762	False	NA	NA	False	NA	NA	NA	10939834	10933664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10939507
transcript_12752.known	chr1	-	1472	12	FSM	ENSG00000143156.14	ENST00000367811.8	1472	12	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_10	27.3178414742072	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169364736	True	NA	NA	False	AATAAA	-18	NA	169367797	169132530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_127520.known	chr7	-	2035	4	FSM	ENSG00000189043.10	ENST00000339600.6	2035	4	0	0	0	0	multi-exon	FALSE	canonical	3	11961	junction_2	636.085424032548	33248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACGTTTTCTAGAATTGAG	-10862285	True	NA	NA	False	AATAAA	-23	NA	10940153	10931942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_10933693_10938089_10938148_10938807_10938897_10940015
transcript_127532.known	chr7	+	2627	17	FSM	ENSG00000106443.17	ENST00000423760.6	2627	17	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	41.0144315302553	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTATTTGGAATTCGTA	10968788	True	NA	NA	False	AATAAA	-22	NA	10973888	11169623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_10974325_10974834_10974946_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_127533.known	chr7	+	3427	18	FSM	ENSG00000106443.17	ENST00000634607.2	3427	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	20.6555203040529	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAGCTTGTATTTGGAAT	10968771	True	NA	NA	False	AATAAA	-17	NA	10973871	11169618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_10974325_10974834_10974946_10982371_10983160_10990702_10990848_11013746_11013907_11022867_11022980_11028680_11028819_11035639_11035787_11036417_11036689_11036984_11037092_11038759_11038856_11040671_11040776_11042682_11042815_11051611_11051781_11061790_11061842_11061963_11062086_11111349_11111468_11169415
transcript_127534.known	chr7	+	12351	8	FSM	ENSG00000106460.19	ENST00000396668.8	12351	8	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_4	16.7502665223998	161	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGCTATTTATATCAG	12208700	True	NA	NA	False	AATAAA	-18	NA	12211293	12243367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12211426_12214808_12215028_12218457_12218522_12224225_12224386_12229678_12229820_12230388_12230439_12231061_12231116_12231836
transcript_127543.nic	chr7	-	2016	8	NIC	ENSG00000146530.15	novel	5936	30	NA	NA	21	3124	intron_retention	FALSE	canonical	2	11	junction_1	10.5404952832553	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATCTTTTTTGCTAGAC	-12402671	True	NA	NA	False	AATAAA	-17	NA	12403920	12374439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_12375228_12377775_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12389126_12389359_12393593_12393779_12403658
transcript_127544.known	chr7	-	1394	8	FSM	ENSG00000146530.15	ENST00000326715.4	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	11.581124685435	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATAGT	-12403703	False	1249	NA	False	NA	NA	NA	12403724	12377563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_12377921_12379476_12379567_12380485_12380734_12383535_12383602_12388807_12388958_12389126_12389359_12393593_12393779_12403658
transcript_127549.known	chr7	-	573	2	FSM	ENSG00000146530.15	ENST00000485526.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGTGACTATGTCTGCAT	NA	False	NA	-7	True	AATAAA	-21	NA	12333726	12330886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_12331198_12333464
transcript_127559.known	chr7	+	9682	16	FSM	ENSG00000006747.15	ENST00000297029.10	9682	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.88501394248892	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	12570675	True	NA	NA	False	AATAAA	-22	NA	12570719	12660182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12570986_12578063_12578219_12581059_12581222_12604513_12604664_12622800_12622894_12625009_12625143_12625761_12625851_12626583_12626800_12629100_12629223_12636044_12636136_12640346_12640518_12644137_12644316_12644583_12644706_12649466_12649545_12651840_12651902_12652587
transcript_127560.known	chr7	+	1296	3	FSM	ENSG00000122644.13	ENST00000396662.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	20.5	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGTGTTTTGTGCTTAC	12685573	True	NA	16	True	AATAAA	-17	NA	12686855	12689179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687044_12687634_12687729_12688165
transcript_127561.known	chr7	+	1147	2	FSM	ENSG00000122644.13	ENST00000356797.7	1147	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687044_12688165
transcript_127564.known	chr7	+	1144	2	FSM	ENSG00000122644.13	ENST00000396664.2	1144	2	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTAGTGTTTTGTGCT	12685625	False	NA	13	True	AATAAA	-14	NA	12686907	12689176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687044_12688168
transcript_127566.known	chr7	+	840	2	FSM	ENSG00000122644.13	ENST00000404894.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGAAGAGTGTCTACAGCG	12686568	True	NA	NA	False	NA	NA	NA	12687634	12688914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_12687729_12688168
transcript_127578.known	chr7	+	431	2	FSM	ENSG00000213875.3	ENST00000436455.1	431	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACAAAGTAATCTTATATA	NA	False	NA	NA	False	AATACA	-27	NA	13871855	13872513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_13872197_13872423
transcript_127579.known	chr7	-	6459	14	FSM	ENSG00000006468.14	ENST00000430479.6	6459	14	0	0	0	0	multi-exon	FALSE	non_canonical	3	49	junction_13	47.6307294772245	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGACTGTCGTGATCAC	-13983925	True	NA	-1	True	AATAAA	-18	NA	13989666	13891228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989267_13989465_13989562
transcript_12758.nic	chr1	-	1215	10	NIC	ENSG00000143156.14	novel	1590	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_9	91.9006441493297	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	-169364754	True	NA	NA	False	AATAAA	-18	NA	169367815	169132530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169287302_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169367707
transcript_127582.known	chr7	-	3391	13	FSM	ENSG00000006468.14	ENST00000405218.6	3391	13	0	0	0	0	multi-exon	FALSE	non_canonical	3	75	junction_12	33.4168744798193	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTTTTTTGTTCTGTTTT	-13989937	False	NA	-10	True	TTTAAA	-6	NA	13989947	13894380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_127586.known	chr7	-	4181	12	FSM	ENSG00000006468.14	ENST00000405358.8	4181	12	0	0	0	0	multi-exon	FALSE	non_canonical	3	18	junction_11	50.6832653686575	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTGTTTTGAATTTCT	-13988863	False	811	-7	True	AATAAA	-24	NA	13988873	13893267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13896088_13900737_13900840_13906429_13906600_13909631_13909701_13911238_13911308_13931501_13931750_13935707_13935897_13939116_13939247_13977426_13977481_13986637_13986686_13988085_13988174_13988679
transcript_127604.known	chr7	-	622	6	FSM	ENSG00000006468.14	ENST00000483075.1	622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.0386915776741	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCAACTCCAATCTTTAAC	-13989629	False	NA	NA	False	AAAACA	-10	NA	13989639	13974863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_13975087_13977426_13977481_13986637_13986686_13988085_13988174_13989007_13989140_13989562
transcript_127613.nnic	chr7	-	1514	12	NNC	ENSG00000187546.14	novel	2476	13	NA	NA	14156	-831	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_10	3.42330370613868	30	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGCCTTTCACATTTG	NA	False	NA	NA	False	AGTAAA	-16	NA	15547859	15201147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_15201360_15365513_15365620_15366139_15366223_15385445_15385563_15387405_15387541_15390670_15390751_15390839_15390906_15394112_15394180_15418557_15418654_15431004_15431109_15544771_15544924_15547563
transcript_127617.nnic	chr7	-	996	3	NNC	ENSG00000214960.11	novel	1709	9	NA	NA	84523	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	1	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGGATACCAGGGAACGGA	NA	False	NA	NA	False	AATAAA	-10	NA	16216943	16091191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_16091800_16216065_16216198_16216687
transcript_127619.known	chr7	-	1758	2	FSM	ENSG00000171243.8	ENST00000307068.5	1758	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTATTTTTTTTTCTAAG	-16465708	True	NA	NA	False	AATAAA	-14	NA	16465738	16461480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16462964_16465463
transcript_127620.known	chr7	-	599	1	FSM	ENSG00000272361.2	ENST00000607795.2	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTTGAATGGTCATCT	NA	False	NA	NA	False	AATAAA	-16	NA	16594224	16593625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16593600_16594200
transcript_127622.known	chr7	-	2489	10	FSM	ENSG00000106524.9	ENST00000306999.7	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	10.2306728354819	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTCATCTTGTTTTATAA	-16644654	True	NA	NA	False	AATAAA	-20	NA	16645754	16599778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16600946_16602379_16602510_16604720_16604850_16609629_16609766_16610548_16610764_16615743_16615905_16624982_16625082_16627039_16627179_16636390_16636456_16645506
transcript_127626.known	chr7	-	591	4	FSM	ENSG00000106524.9	ENST00000421746.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.1220095603249	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATCAGCATGAACATGGA	-16644716	True	NA	NA	False	NA	NA	NA	16645816	16627090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16627179_16636390_16636456_16644684_16644813_16645506
transcript_127628.nic	chr7	-	706	3	ISM	ENSG00000106524.9	ENST00000628652.1	1270	9	-14	23217	-14	228	5prime_fragment	FALSE	canonical	3	75	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGATTTGTTTCTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	16645831	16626862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_16627179_16636390_16636456_16645506
transcript_127635.known	chr7	+	1804	12	FSM	ENSG00000136261.16	ENST00000258761.8	1804	12	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_1	89.5677406508016	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGCTTATATTGTCAGA	16638308	True	NA	17	True	AATAAA	-15	NA	16646180	16706517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646289_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_127641.known	chr7	+	1405	11	FSM	ENSG00000136261.16	ENST00000415365.5	1405	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	189.658139820046	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAGGTATGATTCTGTT	16638258	True	NA	13	True	AAGAAA	-25	NA	16646130	16704662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546
transcript_127642.known	chr7	+	1711	11	FSM	ENSG00000136261.16	ENST00000437745.5	1711	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	269.45131285633	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATATTGTCAGAGCTTTT	16638287	True	NA	23	True	AATAAA	-21	NA	16646159	16706523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646305_16665436_16665502_16674411_16674589_16681300_16681405_16682779_16682846_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_127644.known	chr7	+	1689	11	FSM	ENSG00000136261.16	ENST00000405202.5	1689	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	218.861051811418	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAACCAGTTTTTTAAAATA	16638322	True	NA	-19	True	NA	NA	NA	16646194	16706481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16646289_16674411_16674589_16681300_16681405_16682779_16682846_16685904_16686041_16689796_16689907_16694833_16695005_16696914_16697062_16698047_16698187_16704546_16704670_16706059
transcript_12765.known	chr1	-	4298	7	FSM	ENSG00000143156.14	ENST00000524967.5	4298	7	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_5	21.6929327969579	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAGCAGATATCTTTGCAG	-169364711	True	NA	NA	False	NA	NA	NA	169367772	169283820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169287409_169298555_169298764_169303144_169303196_169309969_169310081_169323116_169323284_169324392_169324501_169367707
transcript_12766.nnic	chr1	-	741	6	NNC	ENSG00000143156.14	novel	1472	12	NA	NA	-26871	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_5	120.363449601613	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTTTGGTTTATTTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	169257603	169132530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_169132818_169169446_169169555_169230717_169230820_169235130_169235200_169237622_169237688_169257493
transcript_127663.known	chr7	+	1873	6	FSM	ENSG00000106537.8	ENST00000262067.5	1873	6	0	0	0	0	multi-exon	FALSE	canonical	3	465	junction_2	21.301643129111	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGAGGTGGAATTCTT	16751518	True	NA	28	True	ATTAAA	-30	NA	16753754	16784536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_16754031_16776210_16776379_16777041_16777123_16777797_16777912_16779002_16779117_16783416
transcript_127665.known	chr7	-	1697	8	FSM	ENSG00000106541.12	ENST00000419304.7	1697	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGGCATTATTAATTT	NA	False	NA	NA	False	GATAAA	-17	NA	16804999	16791810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_16792958_16794935_16795020_16797630_16797695_16799743_16799818_16801150_16801204_16801319_16801384_16801657_16801804_16804934
transcript_127666.known	chr7	-	6357	26	FSM	ENSG00000071189.21	ENST00000428135.7	6357	26	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_13	16.5987951369971	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGAGTTCATTTAA	-17937124	True	NA	-14	True	AATAAA	-14	NA	17940494	17790760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_17794293_17796826_17796940_17798689_17798759_17799008_17799155_17801587_17801660_17803418_17803581_17814833_17814945_17816181_17816290_17821508_17821649_17826021_17826092_17830009_17830048_17834051_17834185_17834760_17834866_17839806_17840001_17845594_17845695_17850346_17850436_17850825_17850965_17868406_17868491_17873527_17873617_17875479_17875582_17875668_17875791_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_127671.known	chr7	-	4146	6	FSM	ENSG00000071189.21	ENST00000409604.1	4146	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	53.8568472898294	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATCATTACTTTTC	-17937114	True	NA	NA	False	AATAAA	-28	NA	17940484	17879426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_17882944_17890362_17890485_17891545_17891636_17893331_17893435_17897333_17897447_17940283
transcript_127680.nic	chr7	+	399	3	NIC	ENSG00000048052.24	novel	728	5	NA	NA	-7	-3471	combination_of_known_junctions	FALSE	canonical	2	10	junction_2	17	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTCCCTTTCAGTTGAA	18494576	True	NA	NA	False	AATAAA	-19	NA	18495731	18502565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_18495855_18496261_18496325_18502352
transcript_127682.known	chr7	-	3893	4	FSM	ENSG00000105849.6	ENST00000222567.6	3893	4	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	34.5350063944784	967	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGGCCTCTGATGTGA	-19708341	True	NA	-2	True	AATAAA	-21	NA	19709037	19695460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19698728_19700071_19700281_19704778_19704921_19708762
transcript_127692.known	chr7	-	3975	4	FSM	ENSG00000173452.14	ENST00000405764.7	3975	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATATGGTGTTGGCTTTCT	-19773354	False	NA	NA	False	AATAAA	-19	NA	19773393	19719315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19722135_19725513_19725769_19729381_19729439_19772549
transcript_12773.known	chr1	+	2216	6	FSM	ENSG00000143153.14	ENST00000367815.9	2216	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	9.68297474952816	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCGTGTGTGATTCACT	169104391	True	NA	13	True	AATAAA	-13	NA	169106689	169132719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169106927_169111369_169111499_169124883_169125040_169127223_169127409_169130009_169130091_169131291
transcript_12776.known	chr1	+	2524	7	FSM	ENSG00000117475.14	ENST00000367808.8	2524	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	13.3873904186821	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGACTATTCCTTTTTTC	169367060	True	NA	24	True	AATAAA	-18	NA	169368194	169388305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169382061_169382282_169386996
transcript_12785.nnic	chr1	+	2539	6	NIC	ENSG00000117475.14	novel	2524	7	NA	NA	-14	-4	combination_of_known_splicesites	FALSE	canonical	2	7	junction_5	41.6269143703926	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCGACTATTCCTTT	NA	False	NA	20	True	AATAAA	-14	NA	169367955	169388301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_169368343_169369472_169369551_169376539_169376980_169378329_169378530_169380480_169380610_169386996
transcript_12789.nic	chr1	-	1897	6	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	18.810635289644	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-169427173	True	NA	0	True	AATAAA	-23	NA	169427474	169394869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424931_169427287
transcript_1279.nic	chr1	+	688	7	NIC	ENSG00000069424.16	novel	997	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	13.6950923894494	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCCCCTGATCACGTC	5992213	True	NA	NA	False	ATTAAA	-18	NA	5992645	6086366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_5992789_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6086157
transcript_12790.known	chr1	-	1860	6	FSM	ENSG00000117477.13	ENST00000367806.8	1917	6	57	0	45	0	multi-exon	TRUE	canonical	0	0	junction_5	18.810635289644	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-169427116	True	NA	0	True	AATAAA	-23	NA	169427417	169394869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169395207_169397236_169397392_169419012_169419160_169421362_169422314_169424810_169424951_169427287
transcript_127901.known	chr7	-	566	4	ISM	ENSG00000243004.7	ENST00000457921.6	955	7	154879	0	121	0	3prime_fragment	FALSE	canonical	3	349	junction_2	57.5634915163731	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTCTATTTATTTACT	-19968172	True	NA	-2	True	AATAAA	-14	NA	19968237	19918980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_19919261_19919865_19919978_19960921_19960995_19968136
transcript_127902.known	chr7	-	743	6	FSM	ENSG00000243004.7	ENST00000415499.5	743	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	246.862714884204	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTCACAGTATCACAAAC	-20121315	True	NA	NA	False	TATAAA	-12	NA	20125162	19931070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_19931299_19960921_19960995_19968136_19968396_20028918_20028960_20045502_20045562_20125079
transcript_127903.known	chr7	+	483	1	FSM	ENSG00000213860.4	ENST00000396599.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3852	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	20002695	False	NA	NA	False	NA	NA	NA	20002764	20003247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20002800_20003200
transcript_127906.nnic	chr7	+	1069	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24876	5439	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	4.18993502999218	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120979	True	NA	8	True	AATAAA	-20	NA	20121012	20135914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128968_20129003_20130211_20130514_20135482
transcript_127907.nnic	chr7	+	1072	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24880	5439	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	20.0720922897661	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120983	True	NA	8	True	AATAAA	-20	NA	20121016	20135914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128961_20129003_20130211_20130514_20135482
transcript_127909.nnic	chr7	+	430	2	Genic_Genomic	ENSG00000267055.1	novel	670	5	NA	NA	24880	-1381	multi-exon	FALSE	canonical	3	66	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTATTTGGATCATG	20120983	True	NA	NA	False	ATTAAA	-15	NA	20121016	20129094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_20121314_20128961
transcript_12791.nnic	chr1	-	966	5	NIC	ENSG00000117477.13	novel	1917	6	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	19.5512147960172	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGTGCCATCTCTTAG	-169427173	True	NA	0	True	AATAAA	-23	NA	169427474	169394869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_169395207_169397236_169397392_169419012_169419160_169424810_169424951_169427287
transcript_12792.known	chr1	+	1295	3	FSM	ENSG00000117475.14	ENST00000367807.7	1295	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGTGTCTTCATTGTA	169367583	True	NA	NA	False	AATAAA	-17	NA	169367969	169377383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169368343_169369472_169369551_169376539
transcript_127925.nnic	chr7	+	1035	5	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20852	-3	multi-exon	FALSE	canonical	3	17	junction_4	20.079529376955	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTATGGTAATCTGGA	20119231	True	NA	2	True	AATAAA	-13	NA	20121063	20153528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434_20150590_20153050
transcript_127926.nnic	chr7	+	828	5	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20855	0	multi-exon	FALSE	canonical	2	18	junction_2	18.8729303501073	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	20119228	True	NA	5	True	AATAAA	-16	NA	20121060	20153531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434_20150590_20153263
transcript_12793.known	chr1	-	1246	3	FSM	ENSG00000117477.13	ENST00000456107.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACCTAAGTGGGCAT	-169427161	True	NA	NA	False	AAGAAA	-24	NA	169427462	169421362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169422314_169424810_169424931_169427287
transcript_127932.nnic	chr7	+	865	5	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20899	0	multi-exon	FALSE	canonical	2	18	junction_2	4.96865172858795	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	20120983	True	NA	5	True	AATAAA	-16	NA	20121016	20153531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128968_20129003_20147426_20147538_20150434_20150590_20153263
transcript_127941.nnic	chr7	+	778	4	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24914	5439	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	25.3683967872539	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20119218	True	NA	8	True	AATAAA	-20	NA	20121050	20135914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128961_20129003_20130471_20130514_20135482
transcript_127943.nnic	chr7	+	1038	4	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20855	-2464	multi-exon	FALSE	canonical	3	18	junction_2	20.9973543306982	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAGGAAGTGAAACTT	20119228	True	NA	NA	False	NA	NA	NA	20121060	20151067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20147426_20147538_20150434
transcript_127944.nnic	chr7	+	916	4	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20844	-3	multi-exon	FALSE	canonical	1	3	junction_2	27.0102861065105	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTTATGGTAATCTGGA	20119239	True	NA	2	True	AATAAA	-13	NA	20121071	20153528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20150434_20150590_20153050
transcript_127945.nnic	chr7	+	733	4	Fusion	ENSG00000267055.1_ENSG00000228598.1	novel	639	4	NA	NA	-20871	0	multi-exon	FALSE	canonical	1	3	junction_2	26.106618998935	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	20119212	True	NA	5	True	AATAAA	-16	NA	20121044	20153531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_20121314_20128961_20129003_20150434_20150590_20153263
transcript_12795.known	chr1	-	3612	6	FSM	ENSG00000117479.15	ENST00000236137.10	3612	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	6.34350061086148	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTAAATTTATCTTCT	-169483618	True	NA	4	True	AATAAA	-35	NA	169485944	169463908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169465978_169468110_169468253_169468643_169468837_169469963_169470187_169477154_169477758_169485562
transcript_127956.nnic	chr7	+	818	3	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24832	5439	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_2	18	137	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120956	False	NA	8	True	AATAAA	-20	NA	20120968	20135914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128961_20129003_20135482
transcript_127960.nnic	chr7	+	763	3	NNC	ENSG00000267055.1	novel	670	5	NA	NA	24880	5439	at_least_one_novel_splicesite	FALSE	canonical	2	30	junction_2	1	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTGCTTATGTATGT	20120983	True	NA	8	True	AATAAA	-20	NA	20121016	20135914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20128968_20129003_20135482
transcript_127965.nnic	chr7	+	664	3	NNC	ENSG00000228598.1	novel	639	4	NA	NA	-20843	0	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	11.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATGGTAATCTGGAGAA	20119240	True	NA	5	True	AATAAA	-16	NA	20121072	20153531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20121314_20150434_20150590_20153263
transcript_127968.known	chr7	-	9153	7	FSM	ENSG00000183742.13	ENST00000400331.10	9153	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.77551626063147	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTATGATTAAGTT	-20215782	True	NA	NA	False	AATAGA	-22	NA	20217384	20134654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20141159_20154192_20154382_20158203_20160246_20161747_20161871_20164255_20164400_20170713_20170779_20217298
transcript_127969.nnic	chr7	-	423	3	NNC	ENSG00000183742.13	novel	9153	7	NA	NA	-20	-7496	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAAAGGCAGCTAAATTC	-20215822	True	NA	NA	False	NA	NA	NA	20217424	20177723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_20177931_20184988_20185079_20217298
transcript_127972.known	chr7	-	304	4	FSM	ENSG00000183742.13	ENST00000471019.1	304	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACTACTTGAAAAGAAA	-20215755	True	NA	NA	False	TTTAAA	-4	NA	20217357	20164368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20164400_20170713_20170782_20198524_20198671_20217298
transcript_127977.nnic	chr7	+	832	4	FSM	ENSG00000233834.7	ENST00000685385.1	817	4	-17	2	-14	0	multi-exon	FALSE	canonical	3	13	junction_2	31.5629881700422	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGTGTATGTGTCTGTG	20216867	True	NA	NA	False	ATTAAA	-31	NA	20217521	20221700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20217623_20218255_20218364_20219491_20219757_20221342
transcript_127978.known	chr7	+	667	4	FSM	ENSG00000233834.7	ENST00000439058.6	727	4	41	19	0	-16	multi-exon	FALSE	canonical	3	22	junction_1	25.31578339473	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGCATTCCATTAACAAAT	20216922	True	NA	NA	False	ATTAAA	-12	NA	20217576	20221681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20217623_20218255_20218364_20219582_20219757_20221342
transcript_127981.known	chr7	+	740	5	FSM	ENSG00000233834.7	ENST00000430859.2	798	5	50	8	9	-5	multi-exon	FALSE	canonical	3	42	junction_1	16.4544826719043	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAATATATGTGTATG	20216931	False	NA	NA	False	ATTAAA	-23	NA	20217585	20221692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20217623_20217787_20217859_20218255_20218364_20219582_20219757_20221342
transcript_127985.nnic	chr7	+	622	4	NNC	ENSG00000105855.10	novel	1090	2	NA	NA	-601	13874	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.35702260395516	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCAATTTACTTTAATTTG	NA	False	NA	NA	False	AATAAA	-25	NA	20330100	20367231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_20330370_20331976_20332024_20363636_20363723_20367011
transcript_127987.known	chr7	-	666	4	FSM	ENSG00000271133.6	ENST00000603156.2	924	4	30	228	30	-228	multi-exon	FALSE	canonical	2	3	junction_3	3.77123616632825	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAACTCTCTGAAAG	-20331637	True	NA	54	True	NA	NA	NA	20331747	20328528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20328857_20329366_20329514_20329689_20329783_20331649
transcript_127991.known	chr7	-	737	3	FSM	ENSG00000271133.6	ENST00000605357.6	840	3	100	3	96	2	multi-exon	FALSE	canonical	2	10	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTGATTAATTTGT	-20331571	False	NA	NA	False	AATAAA	-20	NA	20331681	20328298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_20328857_20329366_20329514_20331649
transcript_127992.nnic	chr7	-	540	3	NNC	ENSG00000271133.6	novel	840	3	NA	NA	991	-289	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTGACCCCTGCCAGTT	-20330676	False	110	-7	True	AATAAA	-26	NA	20330786	20328589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_20328857_20329366_20329514_20330660
transcript_127994.nnic	chr7	-	746	3	NNC	ENSG00000164651.18	novel	3626	2	NA	NA	2630	2536	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTGATTTTTGCTGCTTC	-20782380	False	NA	-6	True	AATAAA	-19	NA	20784256	20779742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_20780235_20780980_20781086_20784107
transcript_1280.known	chr1	+	719	7	FSM	ENSG00000069424.16	ENST00000663169.1	719	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	13.0085442007252	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATCCCCTGATCACGTC	6025934	True	NA	NA	False	ATTAAA	-18	NA	6026271	6086366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194_6082275_6085203_6085249_6086157
transcript_128014.known	chr7	+	447	6	FSM	ENSG00000232790.3	ENST00000447262.2	447	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.92574776766556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGTAGTAGAAAGATCAAGA	20834824	False	NA	NA	False	NA	NA	NA	20835430	21023148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_20835505_20882739_20882817_21020867_21021004_21021858_21021908_21022056_21022151_21023131
transcript_128018.nnic	chr7	+	607	4	NIC	ENSG00000232790.3	novel	447	6	NA	NA	-57	5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.2659863237109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAAGTCTTCACTCAAG	20834712	True	NA	NA	False	AATAAA	-22	NA	20835318	21023367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_20835505_21020867_21021004_21021858_21021908_21023131
transcript_12802.known	chr1	+	782	6	FSM	ENSG00000000460.17	ENST00000496973.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	77.9779456000221	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGATTTAAATCTTACCAAA	169792109	True	NA	NA	False	ATTAAA	-2	NA	169795042	169804347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_169795214_169798918_169798959_169800882_169800972_169802620_169802726_169803168_169803310_169804111
transcript_128020.known	chr7	+	6077	6	FSM	ENSG00000105866.15	ENST00000222584.8	6077	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	9.45727233402951	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATCATGAACACTGGAGA	21425606	True	NA	7	True	AATAAA	-21	NA	21428082	21514822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_21428259_21428676_21428793_21429288_21430844_21477078_21477308_21481923_21482124_21511021
transcript_128021.nic	chr7	+	2139	7	ISM	ENSG00000105877.19	ENST00000409508.8	14343	82	-22	331055	-22	68	5prime_fragment	FALSE	canonical	3	13	junction_1	1.38443731048635	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTGTGTAAAAGTTT	21542423	True	NA	NA	False	AATAAA	-14	NA	21543016	21570784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185_21564398_21570068
transcript_128023.nic	chr7	+	2003	6	NIC	ENSG00000105877.19	novel	14343	82	NA	NA	-22	144	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	5.2687759489278	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTCTATTGGCTTAG	21542423	True	NA	NA	False	ATTAAA	-30	NA	21543016	21570860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21570068
transcript_128025.known	chr7	+	14343	82	FSM	ENSG00000105877.19	ENST00000409508.8	14343	82	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_17	3.99691238857888	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCACTTTGTTCAGTGTAA	21542445	True	NA	NA	False	AATAAA	-23	NA	21543038	21901839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_21543597_21545005_21545150_21558801_21558999_21559602_21559793_21561070_21561171_21564185_21564398_21570068_21570300_21571805_21571974_21581904_21582022_21588063_21588202_21588511_21588637_21589207_21589404_21590917_21591023_21591184_21591578_21599786_21600120_21600675_21600931_21601009_21601180_21601395_21601619_21606425_21606543_21606646_21606734_21615113_21615273_21616208_21616293_21617618_21617778_21619099_21619223_21619955_21620079_21635870_21636096_21637610_21637703_21638938_21639066_21655831_21655982_21658797_21659032_21681545_21681678_21683783_21683945_21687098_21687256_21687381_21687528_21690764_21690882_21698074_21698214_21702709_21702803_21704433_21704629_21705459_21705538_21707698_21707836_21710552_21710704_21711711_21711861_21717774_21717926_21720724_21720857_21725810_21725985_21735639_21735845_21738700_21738867_21739570_21739674_21741926_21742167_21744437_21744600_21744869_21745064_21748579_21748743_21749677_21749802_21750221_21750365_21765427_21765590_21773765_21774000_21778957_21779105_21784426_21784541_21786623_21786768_21787400_21787584_21789240_21789343_21801136_21801276_21807882_21808050_21816466_21816703_21818216_21818340_21842543_21842749_21852466_21852632_21854314_21854456_21861852_21862024_21864534_21864658_21866469_21866664_21867858_21868008_21868863_21868992_21873273_21873502_21880701_21880894_21884290_21884411_21892424_21892668_21894622_21894806_21894883_21895000_21899335_21899449_21899979_21900121_21901006
transcript_128028.known	chr7	-	2915	11	FSM	ENSG00000164649.20	ENST00000356195.9	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	494.491698615861	640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTGTCAGTGGTA	-21934846	True	NA	-3	True	AATAAA	-25	NA	21945878	21900899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21940261_21940316_21945780
transcript_12803.known	chr1	-	1426	2	FSM	ENSG00000171806.12	ENST00000303469.6	1426	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	-169793538	False	1151	-12	True	AATAAA	-16	NA	169794689	169792528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169793898_169794632
transcript_128033.nic	chr7	-	2939	10	NIC	ENSG00000164649.20	novel	2883	10	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	543	junction_8	234.722268244571	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21945847	False	NA	-2	True	AATAAA	-26	NA	21945958	21900898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911752_21916753_21916895_21945780
transcript_128034.known	chr7	-	2883	10	FSM	ENSG00000164649.20	ENST00000406877.8	2883	10	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_8	192.731822892732	1030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTGTCAGTGGTAT	-21934867	True	NA	-2	True	AATAAA	-26	NA	21945899	21900898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21911616_21911755_21916753_21916895_21945780
transcript_128036.known	chr7	-	1830	9	FSM	ENSG00000164649.20	ENST00000373934.4	1830	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	382.070653642752	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAAAGGGGACCATCAACA	-21934852	True	NA	NA	False	ATTAAA	-11	NA	21945884	21901798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_21902353_21902977_21903115_21904109_21904260_21905505_21905632_21906288_21906457_21906567_21906640_21908129_21908508_21916753_21916895_21945780
transcript_12804.known	chr1	-	1462	2	FSM	ENSG00000171806.12	ENST00000310392.5	1462	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTGTTTGATTTCTGT	-169793756	True	NA	-12	True	AATAAA	-16	NA	169794907	169792528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169793898_169794814
transcript_128041.known	chr7	-	569	5	FSM	ENSG00000164649.20	ENST00000447180.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	456.64209179619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCACCAAGAAGCTGGCCAA	-21934846	True	NA	-74	True	NA	NA	NA	21945878	21908366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_21908508_21911616_21911752_21916753_21916895_21940261_21940316_21945780
transcript_128047.nic	chr7	-	1423	6	NIC	ENSG00000105889.16	novel	1261	5	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_5	18.7040102651811	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499563	True	NA	-2	True	ATTAAA	-18	NA	22500231	22419443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22495361_22495481_22500113
transcript_12805.known	chr1	-	850	2	FSM	ENSG00000171806.12	ENST00000454472.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCTGGGAAAAAAGTCT	-169793812	True	NA	NA	False	NA	NA	NA	169794963	169793141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169793898_169794869
transcript_128051.nnic	chr7	-	1424	6	NNC	ENSG00000105889.16	novel	1261	5	NA	NA	-36	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.6203975494892	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGAATTCGCATCTCTT	-22499573	True	NA	-6	True	ATTAAA	-14	NA	22500241	22419447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_22419837_22451071_22451186_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_128055.known	chr7	-	1193	5	FSM	ENSG00000105889.16	ENST00000406890.6	1193	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	16.3859696081739	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499509	True	NA	-2	True	ATTAAA	-18	NA	22500177	22419443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493780_22494771_22494887_22500113
transcript_128056.known	chr7	-	1261	5	FSM	ENSG00000105889.16	ENST00000678116.1	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.256095748383	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCGCATCTCTTAATT	-22499520	True	NA	-2	True	ATTAAA	-18	NA	22500188	22419443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22419837_22492564_22492730_22493323_22493837_22494771_22494887_22500113
transcript_128060.known	chr7	-	1054	4	FSM	ENSG00000105889.16	ENST00000483679.1	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	6.59966329107444	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGTGTTTCCTAGACA	-22499533	True	NA	NA	False	NA	NA	NA	22500201	22492391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22492730_22493323_22493837_22494771_22494887_22500113
transcript_128064.known	chr7	-	1384	1	FSM	ENSG00000233476.3	ENST00000434005.1	1384	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	818	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATATTATCCCTAATAC	-22511968	False	NA	NA	False	NA	NA	NA	22511999	22510615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22510600_22512000
transcript_128065.known	chr7	+	2432	4	FSM	ENSG00000232759.1	ENST00000435127.1	2432	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTGTTCATTCATTTA	22563310	True	NA	NA	False	ATTAAA	-17	NA	22563336	22573996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22563431_22564965_22565153_22571774_22572014_22572084
transcript_128066.known	chr7	+	1797	3	FSM	ENSG00000232949.2	ENST00000658234.1	1797	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAGAATCAGTGGAACCC	NA	False	NA	NA	False	AATATA	-29	NA	22589697	22602536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22589802_22591162_22591279_22600959
transcript_128068.known	chr7	+	1527	6	FSM	ENSG00000136244.12	ENST00000404625.5	1527	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.979795897113271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAGTGTGTCACGTGAA	22725863	True	NA	NA	False	AATAAA	-24	NA	22725883	22732002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22726259_22727178_22727282_22727443_22727635_22728692_22728807_22729513_22729661_22731405
transcript_128069.known	chr7	+	1127	5	FSM	ENSG00000136244.12	ENST00000258743.10	1127	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTTTGAGTGTGTCACG	22727179	False	NA	NA	False	AATAAA	-20	NA	22727199	22731998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22727282_22727443_22727635_22728692_22728807_22729513_22729661_22731405
transcript_128070.nnic	chr7	-	907	2	Genic_Genomic	ENSG00000233476.3_ENSG00000234513.1	novel	348	1	NA	NA	-26	309	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATCAAAATTTTGAACAGA	NA	False	NA	NA	False	ATTAAA	-27	NA	22774019	22510306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_-_22510762_22773567
transcript_128082.known	chr7	-	434	3	FSM	ENSG00000196683.12	ENST00000358435.9	434	3	0	0	0	0	multi-exon	FALSE	canonical	3	6741	junction_2	142.5	101336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATGCTTGAGTCTTTTTTG	-22769804	True	NA	-4	True	AATAAA	-15	NA	22822849	22812973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22817999_22818049_22822676
transcript_128094.known	chr7	-	731	2	FSM	ENSG00000196683.12	ENST00000463284.2	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	1376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGGCGGCTCTGTTGC	-22769804	True	NA	NA	False	AATAAA	-1	NA	22822849	22812627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22822676
transcript_128096.known	chr7	-	514	4	FSM	ENSG00000196683.12	ENST00000372879.8	514	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	3166.90830657002	2788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTGAGTCTTTTTTGA	-22769746	True	NA	-3	True	AATAAA	-16	NA	22822791	22812972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22817411_22817549_22817999_22818049_22822676
transcript_128097.known	chr7	-	455	3	FSM	ENSG00000196683.12	ENST00000405021.7	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_2	3258.5	3201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGTCTTTTTTGAAT	-22769299	False	NA	-1	True	AATAAA	-18	NA	22822344	22812970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22813186_22817999_22818049_22822153
transcript_128099.known	chr7	+	955	6	FSM	ENSG00000228649.10	ENST00000658124.1	955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.33757453113766	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	22850933	True	NA	NA	False	AATATA	-33	NA	22854272	22861436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858796_22860546_22860639_22860885
transcript_12810.known	chr1	-	6308	13	FSM	ENSG00000000457.14	ENST00000367771.11	6308	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.08903842071052	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGATAAATCAGTTTTAT	-169893406	True	NA	1	True	ATTAAA	-16	NA	169893896	169849630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169853773_169854269_169854965_169859040_169859213_169862612_169862798_169864368_169864509_169866895_169866974_169868927_169869040_169870254_169870358_169873695_169873753_169875977_169876092_169878633_169878820_169888675_169888891_169893787
transcript_128100.known	chr7	+	1063	6	FSM	ENSG00000228649.10	ENST00000661147.1	1063	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	5.88557558782486	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	NA	False	NA	NA	False	AATATA	-33	NA	22854199	22861436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546_22860639_22860885
transcript_128104.known	chr7	+	1400	5	FSM	ENSG00000228649.10	ENST00000656687.2	1408	5	8	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	6.41774882649672	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAGATAAGCAGCTATTA	22850914	True	NA	NA	False	AATAAA	-25	NA	22854253	22861580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570_22858831_22860546
transcript_128105.known	chr7	+	747	5	FSM	ENSG00000228649.10	ENST00000663057.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.66077672302228	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	22850916	True	NA	NA	False	AATATA	-33	NA	22854255	22861436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546_22860639_22860885
transcript_128111.known	chr7	+	1938	4	FSM	ENSG00000228649.10	ENST00000415611.8	1938	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	6.12825877028341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGCATGGTTTATAACAA	NA	False	NA	NA	False	NA	NA	NA	22854125	22860274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22858570
transcript_128114.known	chr7	+	1238	4	FSM	ENSG00000228649.10	ENST00000422542.4	1238	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.83176086632785	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAGATAAGCAGCTATT	NA	False	NA	NA	False	AATAAA	-24	NA	22854154	22861579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860546
transcript_128115.nnic	chr7	+	656	4	FSM	ENSG00000228649.10	ENST00000690219.1	621	4	-1	-34	1	0	multi-exon	FALSE	canonical	1	3	junction_3	8.17856276425687	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGCGTATTATATTTC	22850915	True	NA	NA	False	AATATA	-33	NA	22854254	22861436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972_22857017_22860885
transcript_128121.known	chr7	+	1176	4	FSM	ENSG00000228649.10	ENST00000657608.1	1176	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGAGTTAAATGAAATAC	22850916	True	NA	NA	False	ATTAAA	-15	NA	22854255	22861402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22858570_22858831_22860546
transcript_128124.known	chr7	+	1743	3	FSM	ENSG00000228649.10	ENST00000667557.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	7.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCCTTGGCATTTCAGTG	NA	False	NA	6	True	AATAAA	-20	NA	22854152	22858552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854281_22856521_22856557_22856972
transcript_128126.known	chr7	+	619	3	FSM	ENSG00000228649.10	ENST00000671680.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTATAGTCTTTTTTTTTT	22854739	False	NA	NA	False	NA	NA	NA	22854762	22857354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_22854965_22856521_22856557_22856972
transcript_128128.known	chr7	-	3130	12	FSM	ENSG00000122591.13	ENST00000409923.5	3130	12	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	50.3041985990654	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGAAATGTCTTTCTT	-22999301	True	NA	55	True	ACTAAA	-38	NA	23014084	22944508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_128134.nic	chr7	-	2331	12	NIC	ENSG00000122591.13	novel	3130	12	NA	NA	-17	282	combination_of_known_junctions	FALSE	canonical	3	135	junction_1	70.3113500824243	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGGTTATGTCTCAT	-22999364	True	NA	-8	True	AATAAA	-19	NA	23014147	22945289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_22946164_22947032_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_128138.known	chr7	-	13178	11	FSM	ENSG00000122591.13	ENST00000432176.7	13178	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	108.106660294359	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAAAAAGAGGCGG	-22999347	True	NA	NA	False	NA	NA	NA	23014130	22934210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22946164_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_22991060_22991140_23013924
transcript_12814.nic	chr1	-	436	2	ISM	ENSG00000000457.14	ENST00000470238.1	1538	11	-47	29548	-40	-29548	5prime_fragment	FALSE	canonical	3	25	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGACGACTTAATAGTT	-169893985	False	14	NA	False	AATAAA	-19	NA	169893999	169888666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_169888891_169893787
transcript_128143.known	chr7	-	616	4	FSM	ENSG00000122591.13	ENST00000409763.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	30.4448499567478	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATGACTCATAGCCCAT	-22999291	True	NA	-1	True	AATAAA	-24	NA	23014074	22978163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22978449_22983943_22984046_22991060_22991140_23013924
transcript_128146.known	chr7	-	6337	11	FSM	ENSG00000122591.13	ENST00000440481.6	6337	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	101.515959336451	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAATATTTTTTCCAG	-22999347	True	NA	-20	True	AATAAA	-5	NA	23014130	22941268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22946164_22946951_22947248_22960255_22960416_22961234_22961323_22964414_22964532_22976209_22976306_22976692_22976809_22977340_22977422_22978268_22978449_22983943_22984046_23013924
transcript_128147.known	chr7	-	3995	3	FSM	ENSG00000122591.13	ENST00000467005.6	3995	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_1	14.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTTTCCATGAAAAAAAAAA	-22999308	True	NA	NA	False	CATAAA	-7	NA	23014091	22980296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_22984046_22991060_22991140_23013924
transcript_128148.known	chr7	-	3422	3	FSM	ENSG00000230658.2	ENST00000419813.2	3422	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATTAATAAGCTGAAGTA	-23105692	False	NA	NA	False	NA	NA	NA	23105702	23100374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23103579_23104249_23104318_23105552
transcript_12815.known	chr1	-	2954	20	FSM	ENSG00000075945.13	ENST00000361580.7	2954	20	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_18	6.89453595528961	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTGAAAGTCATGTGTTT	-170074587	True	NA	NA	False	ATTAAA	-21	NA	170074695	169921328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_169921782_169954010_169954111_169961045_169961236_169972512_169972599_169978084_169978184_169981971_169982098_169982701_169982868_169983269_169983383_169984581_169984691_169992154_169992256_170016461_170016625_170024417_170024597_170031885_170031985_170034371_170034497_170035453_170035554_170038289_170038432_170039232_170039289_170046711_170046867_170055304_170055437_170074435
transcript_128151.known	chr7	+	3165	12	FSM	ENSG00000122550.18	ENST00000521082.5	3165	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	230.072859462295	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTACTCATTTCCTTCCTA	23093695	True	NA	7	True	AATAAA	-15	NA	23105757	23175302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_128155.known	chr7	+	5619	11	FSM	ENSG00000122550.18	ENST00000339077.10	5619	11	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_9	181.39749171364	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCTATATTCCTTTTGC	23093722	True	NA	NA	False	AATAAA	-16	NA	23105784	23177914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_128162.nic	chr7	+	1753	8	NIC	ENSG00000122550.18	novel	5619	11	NA	NA	-25	345	combination_of_known_junctions	FALSE	canonical	3	46	junction_7	257.952297441023	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTTTTATTTGGATTCC	23093670	True	NA	13	True	AATAAA	-16	NA	23105732	23156513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23155990
transcript_128174.nic	chr7	+	1562	6	ISM	ENSG00000122550.18	ENST00000339077.10	5619	11	-52	33414	-25	599	5prime_fragment	FALSE	canonical	3	445	junction_4	174.438069239487	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTGTTGCTTTTCTTTC	23093670	True	NA	NA	False	AATAAA	-19	NA	23105732	23144500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850
transcript_128175.nic	chr7	+	1155	6	NIC	ENSG00000122550.18	novel	3165	12	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	337.874888087292	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTAGCATCACTACTCTT	23093671	True	NA	17	True	AATAAA	-20	NA	23105733	23126049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_23106147_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_128177.known	chr7	+	1233	6	FSM	ENSG00000122550.18	ENST00000410047.1	1233	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	353.911288319545	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATATGCTAGCATCACT	23106265	True	NA	11	True	AATAAA	-14	NA	23106297	23126043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106795_23117833_23117965_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_128179.known	chr7	+	969	5	FSM	ENSG00000122550.18	ENST00000322275.9	969	5	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_4	207.588986942949	2494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATGCTAGCATCACTAC	23093722	True	NA	13	True	AATAAA	-16	NA	23105784	23126045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106147_23123776_23123880_23124687_23124782_23125047_23125173_23125760
transcript_128183.known	chr7	+	3231	11	FSM	ENSG00000122550.18	ENST00000409689.5	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	222.444622322051	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGATAATATTAAATATT	23106269	False	NA	-23	True	AATGAA	-31	NA	23106294	23175388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23106795_23123776_23123880_23124687_23124782_23125047_23125173_23140768_23140945_23143850_23144026_23152066_23152210_23165697_23165939_23167835_23168038_23172947_23173046_23174014
transcript_128188.known	chr7	+	1329	8	FSM	ENSG00000136243.18	ENST00000413919.1	1329	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	72.8588235100273	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTAAAGCCTCCACCTC	23178994	True	NA	NA	False	AAGAAA	-18	NA	23182063	23200705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23197172_23197248_23199457_23199543_23200167
transcript_128191.known	chr7	+	1571	7	FSM	ENSG00000136243.18	ENST00000258742.10	1571	7	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	15.9756759550957	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178978	True	NA	10	True	AATAAA	-18	NA	23182047	23201006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_128196.known	chr7	+	2010	7	FSM	ENSG00000136243.18	ENST00000485250.5	2010	7	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_1	54.3588896951445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATGGAACTGAAAAAT	23181830	False	NA	-41	True	AAAAAG	-44	NA	23181840	23200955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182490_23185069_23185299_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_128198.nnic	chr7	+	1566	6	NIC	ENSG00000136243.18	novel	1571	7	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_3	63.480390673026	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCACTTTACTGTCTCACA	23178906	True	NA	10	True	AATAAA	-18	NA	23181975	23201006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23199457_23199543_23200167
transcript_128199.known	chr7	+	1285	6	FSM	ENSG00000136243.18	ENST00000437140.5	1285	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	58.2635391990566	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAATTATGCACGAATA	23178996	True	NA	-29	True	NA	NA	NA	23182065	23200967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23187051_23187147_23195838_23195916_23196679_23196767_23199457_23199543_23200167
transcript_12820.known	chr1	+	2467	7	FSM	ENSG00000120370.14	ENST00000498166.6	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.2833766335744	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTGAATATCACATTAT	170530709	True	NA	19	True	AATAAA	-21	NA	170532150	170553446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_170532285_170533463_170533652_170536309_170536422_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_128203.nnic	chr7	+	764	5	NIC	ENSG00000136243.18	novel	1653	8	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	83.8346587039036	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTAAGAATTTTATTTT	23178896	True	NA	NA	False	AATAAA	-29	NA	23181965	23197284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_23182207_23185069_23185299_23187051_23187147_23196679_23196767_23197172
transcript_128214.known	chr7	+	739	3	FSM	ENSG00000136243.18	ENST00000497500.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	16.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTTGATTCCCTGTATG	23178968	True	NA	NA	False	AATAAA	-19	NA	23182037	23187392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23182207_23185069_23185299_23187051
transcript_128217.known	chr7	+	2259	1	FSM	ENSG00000226816.3	ENST00000413042.3	2259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTTGTGACTCT	NA	False	NA	NA	False	NA	NA	NA	23205786	23208045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23205800_23208000
transcript_128218.known	chr7	+	350	4	FSM	ENSG00000136243.18	ENST00000486136.5	350	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	66.594961437701	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTAAGAATTTTATTTT	23184003	False	NA	NA	False	AATAAA	-29	NA	23187072	23197284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23187147_23195838_23195916_23196679_23196767_23197172
transcript_128219.known	chr7	+	1673	4	FSM	ENSG00000136235.17	ENST00000409458.3	1673	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCATTCTGTCTTTTTTTA	NA	False	NA	NA	False	AATAAA	-26	NA	23246708	23258048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23246928_23253306_23253460_23254168_23254313_23256891
transcript_128221.known	chr7	+	808	2	FSM	ENSG00000136235.17	ENST00000468723.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTAACCCAGGTTAACTG	23273192	True	NA	NA	False	NA	NA	NA	23273292	23274550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23273615_23274064
transcript_128222.known	chr7	-	4274	15	FSM	ENSG00000136231.14	ENST00000258729.8	4274	15	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	11.9991496297335	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTTGTGTAGTATGTTT	-23448675	True	NA	-27	True	AATAAA	-22	NA	23470491	23310208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23312461_23312734_23312849_23313521_23313654_23317638_23317714_23319137_23319255_23342063_23342190_23343717_23343854_23345939_23346063_23347599_23347735_23351304_23351587_23361533_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_128228.known	chr7	-	500	5	FSM	ENSG00000136231.14	ENST00000476938.5	500	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	11.1214882097676	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTCAATATATCTT	-23469788	False	40	NA	False	AGTAAA	-24	NA	23470016	23361340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23361598_23361689_23361742_23418775_23418825_23468481_23468543_23469935
transcript_12823.known	chr1	+	2540	5	FSM	ENSG00000120370.14	ENST00000367763.8	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	19.4036079119323	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATAGTGTCTTTCATTTA	170530724	True	NA	NA	False	AATAAA	-14	NA	170532165	170553834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_170532285_170539209_170539568_170542490_170542593_170544704_170544846_170552014
transcript_128232.nnic	chr7	+	309	3	Intergenic	novelGene_54	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGGACAGACGTGTTTT	23470336	True	NA	7	True	AATAAA	-20	NA	23470543	23472432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_23470663_23470991_23471079_23472329
transcript_128234.nnic	chr7	+	336	3	Intergenic	novelGene_55	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGGACAGACGTGTTTT	23470336	True	NA	7	True	AATAAA	-20	NA	23470543	23472432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_23470690_23470991_23471079_23472329
transcript_128238.known	chr7	+	2905	4	FSM	ENSG00000156928.5	ENST00000466681.2	2905	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	57.659922534345	3818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAGTATATAAAATTTT	23289222	True	NA	NA	False	TTTAAA	-35	NA	23299338	23311729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23299609_23300838_23301018_23307867_23307950_23309355
transcript_128246.known	chr7	+	572	3	FSM	ENSG00000156928.5	ENST00000287543.4	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	615	junction_2	50.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGCTAATCTTGAATTGTTT	23289222	True	NA	NA	False	NA	NA	NA	23299338	23307990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23299609_23300838_23301018_23307867
transcript_128247.known	chr7	+	892	1	FSM	ENSG00000232818.2	ENST00000439199.1	892	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	83	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTTTTATGCAAGAAAAAT	23490326	True	NA	NA	False	NA	NA	NA	23490472	23491364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23490500_23491400
transcript_128248.known	chr7	-	2229	10	FSM	ENSG00000164548.12	ENST00000392502.8	2229	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	231.033427114875	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505811_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531180_23531271_23531788
transcript_128253.known	chr7	-	2142	9	FSM	ENSG00000164548.12	ENST00000538367.6	2142	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	204.774533023518	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23522131_23522433_23531788
transcript_128255.known	chr7	-	1931	9	FSM	ENSG00000164548.12	ENST00000621813.4	1931	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	217.685804256961	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGGGATTGTCTCTTTA	-23517814	False	NA	-8	True	AATAAA	-15	NA	23532041	23504783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531180_23531271_23531788
transcript_12826.known	chr1	+	2160	8	FSM	ENSG00000010932.17	ENST00000354841.4	2160	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTTTTGTTCTCTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	171257956	171285974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171258220_171267542_171267732_171275345_171275509_171278728_171278872_171280785_171280986_171281977_171282334_171283143_171283217_171285201
transcript_128262.known	chr7	-	1785	8	FSM	ENSG00000164548.12	ENST00000297071.9	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_7	84.8997007278204	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATTGTCTCTTTATTGT	-23517754	True	NA	-4	True	AATAAA	-19	NA	23531981	23504779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23505570_23505745_23505814_23506137_23506267_23507419_23507536_23512893_23513083_23516362_23516529_23521706_23521841_23531788
transcript_12827.known	chr1	+	2303	10	FSM	ENSG00000076258.10	ENST00000367749.4	2303	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	6.08783445857899	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTCCCCACCCAAATC	171314057	True	NA	5	True	AATAAA	-19	NA	171314182	171342084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708_171332909_171334410_171334764_171337355_171337426_171341412
transcript_128274.known	chr7	-	1653	5	FSM	ENSG00000164548.12	ENST00000494255.5	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	169.638402197144	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACTCTTTCTCAAAAAAG	-23517754	True	NA	NA	False	NA	NA	NA	23531981	23507156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_23507536_23512893_23513083_23516362_23516529_23521706_23522433_23531788
transcript_128286.known	chr7	+	847	5	FSM	ENSG00000169193.12	ENST00000448353.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	17.1318416990118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGCAGCCAACACCACCA	23596959	False	NA	NA	False	NA	NA	NA	23597514	23643024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23597966_23598052_23604085_23604280_23611170_23611554_23642930
transcript_128288.known	chr7	+	2470	4	FSM	ENSG00000169193.12	ENST00000307471.8	2470	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	6.0184900284226	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTACAGTCTTTTT	23596826	True	NA	56	True	AATAAA	-19	NA	23597381	23644708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23597966_23598052_23611170_23611554_23642930
transcript_128289.known	chr7	+	625	3	FSM	ENSG00000169193.12	ENST00000484553.5	625	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	23.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCCATGTTTTTCTACT	23596860	True	NA	NA	False	AATAAA	-22	NA	23597415	23602220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23597966_23598052_23601870
transcript_128291.known	chr7	+	2324	3	FSM	ENSG00000169193.12	ENST00000409765.5	2324	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAGTATTACAGTCTTTT	23596886	True	NA	55	True	AATAAA	-18	NA	23597441	23644707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23597606_23611170_23611554_23642930
transcript_128313.known	chr7	+	761	6	FSM	ENSG00000188732.11	ENST00000409653.5	761	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	95.7613700820952	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTGGAGAAATTAAAACC	23677918	True	NA	NA	False	NA	NA	NA	23680183	23702167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_128319.known	chr7	+	1136	5	FSM	ENSG00000188732.11	ENST00000409994.3	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	96.8952398211594	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677918	True	NA	16	True	AATAAA	-25	NA	23680183	23702650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_12832.nic	chr1	+	1505	7	ISM	ENSG00000076258.10	ENST00000367749.4	2303	10	-58	8937	-58	0	5prime_fragment	TRUE	canonical	2	7	junction_4	5.99073358520381	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCCTGCTGTTACAAATA	171313999	True	NA	2	True	AATAAA	-15	NA	171314124	171333147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_171314414_171316185_171316328_171319817_171319958_171323003_171323193_171324137_171324301_171331639_171331783_171332708
transcript_128323.known	chr7	+	1403	7	FSM	ENSG00000188732.11	ENST00000344962.9	1403	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	78.39589700148	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTAGTGATATTACTGA	23677933	True	NA	16	True	AATAAA	-25	NA	23680198	23702650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23698191_23698300_23700785_23700869_23702095
transcript_128324.known	chr7	+	888	6	FSM	ENSG00000188732.11	ENST00000409192.7	888	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	68.6952691238633	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTAAAACCATCATCC	23677864	True	NA	NA	False	NA	NA	NA	23680129	23702174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_23680284_23684498_23684673_23689268_23689460_23691389_23691597_23700785_23700869_23702095
transcript_128326.known	chr7	+	705	5	FSM	ENSG00000122585.8	ENST00000407573.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.83739716558867	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTCATCATTGTATAT	24284034	True	NA	-35	True	NA	NA	NA	24284187	24291808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24284276_24284874_24285077_24285240_24285429_24289498_24289580_24291662
transcript_128327.known	chr7	+	555	4	FSM	ENSG00000122585.8	ENST00000242152.7	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.89897948556636	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCCTCCTCAATGAAA	24284036	True	NA	19	True	AATAAA	-18	NA	24284189	24291862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24284276_24285240_24285429_24289498_24289580_24291662
transcript_128328.known	chr7	+	565	3	FSM	ENSG00000122585.8	ENST00000405982.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	3	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATATGTGTGTTTAAATAA	24285031	True	NA	-19	True	NA	NA	NA	24285106	24291824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24285429_24289498_24289580_24291662
transcript_128330.known	chr7	+	8346	12	FSM	ENSG00000105926.16	ENST00000222644.10	8346	12	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	35.8873351817362	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTATTGATTTTTCAGA	24573071	True	NA	NA	False	AATAAA	-18	NA	24573451	24694193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24573594_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_128332.nic	chr7	+	2208	12	NIC	ENSG00000105926.16	novel	1191	8	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	77.6571187926358	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTTGTATATGTTTTGA	24573936	False	NA	10	True	CATAAA	-14	NA	24573957	24687876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_128334.known	chr7	+	1191	8	FSM	ENSG00000105926.16	ENST00000430180.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	88.0315342386361	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGTATCTCACAACCA	24573991	False	NA	32	True	AAAAAG	-6	NA	24574012	24666060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24574279_24623665_24623785_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020
transcript_128336.known	chr7	+	1703	11	FSM	ENSG00000105926.16	ENST00000409761.5	1703	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	83.736730292029	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGAAAATTAAACTCTTAA	24572060	False	NA	-52	True	NA	NA	NA	24573414	24687632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_24573594_24641715_24641869_24649611_24649765_24650484_24650713_24663589_24663722_24665587_24665688_24666020_24666090_24668498_24668661_24679130_24679334_24680391_24680521_24687437
transcript_128338.known	chr7	-	2250	10	FSM	ENSG00000105928.16	ENST00000645220.1	2250	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.55050355892044	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTTGCTTTTTATTCT	-24756833	True	NA	-4	True	ATTAAA	-18	NA	24757464	24698354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_128339.known	chr7	-	1997	9	FSM	ENSG00000105928.16	ENST00000409970.6	1997	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	13.6473440639562	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGTATTCTATTAAAGGA	-24756844	True	NA	-38	True	NA	NA	NA	24757475	24698388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24699260_24702759_24702834_24706183_24706377_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24757395
transcript_128341.nic	chr7	-	1220	8	NIC	ENSG00000105928.16	novel	1848	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	13.6172159940485	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTGTTTTTTGTTCTTTT	-24756828	True	NA	1	True	TATAAA	-17	NA	24757459	24707278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_24707426_24708126_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24744561_24744755_24749563_24749794_24757395
transcript_128347.known	chr7	-	560	5	FSM	ENSG00000105928.16	ENST00000559637.6	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.4847910456137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTCCTGGAGAGGAAT	NA	False	NA	NA	False	NA	NA	NA	24724784	24708251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24708255_24710223_24710389_24717253_24717375_24719046_24719219_24724685
transcript_128348.known	chr7	-	6749	23	FSM	ENSG00000070882.13	ENST00000313367.7	6749	23	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_12	19.9771046636844	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACTTTTGTCTTTGTTT	-24978422	True	NA	-4	True	AATAAA	-16	NA	24980178	24796539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_24800280_24804314_24804438_24806775_24806903_24809806_24809952_24815058_24815204_24816609_24816689_24820174_24820239_24830767_24830906_24834485_24834737_24840689_24840784_24842278_24842414_24849068_24849177_24852503_24852635_24861612_24861770_24863199_24863293_24863495_24863600_24865341_24865466_24866069_24866238_24870731_24870846_24871741_24871796_24871952_24872070_24892376_24892622_24979885
transcript_128350.known	chr7	-	498	4	FSM	ENSG00000172115.9	ENST00000413447.1	498	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1453.43187739303	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTAATGAGTAATAATT	-25039201	True	NA	-31	True	AAGAAA	-30	NA	25125260	25123715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25124689_25124816_25125199
transcript_128351.known	chr7	-	799	4	FSM	ENSG00000172115.9	ENST00000409764.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1453.43187739303	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAATGTTCAACTTTTCA	-25039201	True	NA	14	True	AGTAAA	-45	NA	25125260	25123443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25124689_25124845_25125199
transcript_128360.known	chr7	-	974	3	FSM	ENSG00000172115.9	ENST00000409409.5	974	3	0	0	0	0	multi-exon	FALSE	canonical	2	62	junction_2	1520.5	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAAGATTCACCTGTGT	-25039190	True	NA	NA	False	AATATA	-38	NA	25125249	25123306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25124995
transcript_128368.known	chr7	-	5432	3	FSM	ENSG00000172115.9	ENST00000305786.7	5432	3	0	0	0	0	multi-exon	FALSE	canonical	3	3103	junction_1	213	38553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACCAGATGCCTGTTTT	-25039201	True	NA	-9	True	AATAAA	-17	NA	25125260	25118655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25123850_25123950_25124128_25125199
transcript_12837.nnic	chr1	-	1802	4	Intergenic	novelGene_4	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_3	1.24721912892465	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTTGGGTGTGTCTT	-171373903	True	NA	0	True	ATTAAA	-21	NA	171374045	171330454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr1_-_171331833_171332734_171332840_171351161_171351332_171373896
transcript_128370.known	chr7	-	747	1	FSM	ENSG00000270933.1	ENST00000602992.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTCTTGTGTTCATTTG	-25949378	False	NA	0	True	AATAAA	-16	NA	25949403	25948656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_25948700_25949400
transcript_128394.known	chr7	+	3740	4	FSM	ENSG00000050344.9	ENST00000056233.4	3740	4	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_1	56.1209012361309	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCTAGTATGCTTCTAG	26144312	True	NA	22	True	AATAAA	-31	NA	26152197	26187137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26153069_26177942_26178123_26183700_26183785_26184532
transcript_128401.known	chr7	-	6718	11	FSM	ENSG00000122566.22	ENST00000490912.6	6718	11	0	0	0	0	multi-exon	FALSE	canonical	3	786	junction_1	2660.1543564237	6717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26201479	False	NA	-5	True	AATAAA	-23	NA	26201529	26189926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26190461_26190992_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621
transcript_128402.known	chr7	-	2656	13	FSM	ENSG00000122566.22	ENST00000678935.1	2656	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	3828.05505718417	751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGCACTGTATATTCA	-26201251	False	NA	-19	True	AATAAA	-9	NA	26201301	26189940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26190461_26190992_26191129_26191421_26191651_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26200571
transcript_128403.known	chr7	-	1724	13	FSM	ENSG00000122566.22	ENST00000360787.8	1724	13	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_2	3874.65740689849	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTGGTGTAATGTTTACA	-26115624	True	NA	-1	True	AATAAA	-18	NA	26200746	26190124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26190461_26190992_26191129_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_128404.known	chr7	-	3664	12	FSM	ENSG00000122566.22	ENST00000354667.8	3664	12	0	0	0	0	multi-exon	FALSE	canonical	3	1575	junction_11	3045.63814371953	9914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCAGCGTTTGAGTACTC	-26115624	True	NA	-5	True	AATAAA	-23	NA	26200746	26189926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26192339_26192494_26192578_26193250_26193374_26193574_26193695_26195846_26195910_26196400_26196482_26196556_26196659_26196806_26197018_26197314_26197462_26197621_26197733_26197830_26197867_26200571
transcript_128405.known	chr7	+	2061	6	FSM	ENSG00000122565.19	ENST00000396386.7	2061	6	0	0	0	0	multi-exon	FALSE	canonical	3	3707	junction_1	195.776811701488	8393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTGTAACTGTCTTCT	26168194	True	NA	9	True	ATTAAA	-19	NA	26201744	26213607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_128406.known	chr7	+	1717	6	FSM	ENSG00000122565.19	ENST00000409747.5	1717	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	1547.40771614982	1096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26168214	True	NA	32	True	AATAAA	-24	NA	26201764	26213356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26201827_26202970_26203023_26206367_26206511_26208465_26208556_26211661_26211757_26212081
transcript_128407.known	chr7	+	2128	6	FSM	ENSG00000122565.19	ENST00000337620.8	2128	6	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	1504.55370126825	2667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGACTTTTTTCTTTA	26201065	True	NA	32	True	AATAAA	-24	NA	26201161	26213356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26201562_26202970_26203023_26206367_26206511_26208392_26208556_26211661_26211757_26212081
transcript_128409.known	chr7	+	2665	7	FSM	ENSG00000086300.16	ENST00000338523.9	2665	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	15.8263142336497	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTTTTTTATTTTTT	26291169	True	NA	60	True	AATATA	-19	NA	26291861	26374383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26292087_26346419_26346467_26360974_26361062_26364534_26364636_26365046_26365146_26371820_26372034_26372490
transcript_128410.known	chr7	-	508	2	FSM	ENSG00000225792.2	ENST00000451264.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTAGCTAGATAATTTA	NA	False	NA	NA	False	NA	NA	NA	26376701	26372331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26372569_26376430
transcript_128411.known	chr7	-	611	2	FSM	ENSG00000225792.2	ENST00000451368.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTATATCAACAAAAAAGT	-26376213	True	NA	NA	False	AATAAA	-33	NA	26376272	26372143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26372569_26376086
transcript_128412.known	chr7	+	2063	2	FSM	ENSG00000214870.10	ENST00000653790.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGCCTGTAAATCCCTGC	26398856	True	NA	NA	False	NA	NA	NA	26398929	26401216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_26399022_26399245
transcript_128413.known	chr7	-	3839	13	FSM	ENSG00000005020.13	ENST00000345317.7	3839	13	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	3.73794358200097	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTATGATGCTAATAATT	-26864229	True	NA	-5	True	AATAAA	-18	NA	26864590	26667067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26669657_26670090_26670193_26684735_26684849_26690284_26690363_26725427_26725566_26725922_26725987_26726881_26727007_26738794_26738879_26739886_26739965_26844029_26844138_26854136_26854163_26854784_26854891_26864362
transcript_128417.known	chr7	-	513	4	FSM	ENSG00000005020.13	ENST00000481204.5	513	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.4986771653491	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGACATTTTCCCACGT	-26865095	False	NA	NA	False	GATAAA	-24	NA	26865113	26844028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_26844138_26854136_26854163_26854784_26854891_26864841
transcript_128418.known	chr7	+	671	2	FSM	ENSG00000233429.9	ENST00000434063.3	671	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTTATTAGAAGCCCTAGT	NA	False	NA	NA	False	AAAAAG	-37	NA	27096093	27100154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27096389_27099778
transcript_128421.known	chr7	-	1878	8	FSM	ENSG00000106049.9	ENST00000265395.7	1878	8	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_5	22.8026135272576	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTCTTGGTGTTTTTGT	-27658118	True	NA	-6	True	AATAAA	-16	NA	27662883	27525441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_128423.known	chr7	-	1669	7	FSM	ENSG00000106049.9	ENST00000428288.2	1669	7	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_6	98.3440672107655	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTGAATTCAAATAAATT	-27658103	True	NA	-39	True	TATAAA	-13	NA	27662868	27525474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27526373_27531191_27531349_27538340_27538418_27542966_27543101_27629370_27629493_27632335_27632446_27662697
transcript_128425.nnic	chr7	-	1418	6	NNC	ENSG00000106049.9	novel	570	2	NA	NA	-82	-9879	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	108.226798899348	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTCGAAGGACATTTA	-27658200	True	NA	NA	False	NA	NA	NA	27662965	27541132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_27541756_27542966_27543101_27629370_27629493_27632335_27632446_27649472_27649634_27662697
transcript_128426.nnic	chr7	+	555	3	NNC	ENSG00000286478.1	novel	489	2	NA	NA	-14439	-4	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTGTCTGCATAC	27602948	True	NA	NA	False	ATTAAA	-18	NA	27603034	27627492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_27603171_27616646_27616796_27627222
transcript_128427.nnic	chr7	+	422	2	NNC	ENSG00000286478.1	novel	489	2	NA	NA	-14455	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCATTGTGTCTGCATAC	27602932	True	NA	NA	False	ATTAAA	-18	NA	27603018	27627492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_27603171_27627222
transcript_128432.known	chr7	+	2478	17	FSM	ENSG00000106052.14	ENST00000265393.10	2478	17	0	0	0	0	multi-exon	FALSE	canonical	3	936	junction_13	118.328577882733	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	27730081	True	NA	63	True	AGTAAA	-15	NA	27740094	27828881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_128435.known	chr7	+	3423	17	FSM	ENSG00000106052.14	ENST00000396319.7	3423	17	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_14	253.833329913548	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTGTTGTCAAATTTA	27730148	True	NA	19	True	ATTAAA	-31	NA	27740161	27829767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816521_27816889_27817039_27827737_27827821_27828627
transcript_128443.known	chr7	+	2221	16	FSM	ENSG00000106052.14	ENST00000416801.6	2221	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	290.100779423672	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	27730133	True	NA	46	True	AATATA	-11	NA	27740146	27828864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_27740270_27748517_27748687_27758030_27758134_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27816348_27816395_27816889_27817039_27827737_27827821_27828627
transcript_128444.nnic	chr7	+	2303	15	NIC	ENSG00000106052.14	novel	2478	17	NA	NA	-20	0	combination_of_known_splicesites	TRUE	canonical	3	138	junction_13	273.762596392702	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACCTAAAATAGACCAC	27730061	True	NA	63	True	AGTAAA	-15	NA	27740074	27828881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833_27766022_27769675_27769835_27785162_27785312_27785398_27785490_27787417_27787604_27792005_27792231_27793065_27793213_27794322_27794447_27796115_27796220_27799964_27800091_27827737_27827821_27828627
transcript_128455.nic	chr7	+	616	4	ISM	ENSG00000106052.14	ENST00000265393.10	2478	17	-20	62899	-20	0	5prime_fragment	FALSE	canonical	3	1114	junction_1	85.6776906006848	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGTTAGTGGTGACCAC	27730061	True	NA	NA	False	NA	NA	NA	27740074	27765982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_27740270_27748517_27748687_27758030_27758134_27765833
transcript_128457.known	chr7	-	3173	5	FSM	ENSG00000153814.13	ENST00000283928.10	3173	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	6.86931583201704	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGGCTCTTTATTTT	NA	False	NA	-21	True	AATAAA	-19	NA	28180795	27830576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_27832977_27840697_27840868_27895219_27895417_27991908_27991982_28180462
transcript_128461.nnic	chr7	-	640	3	NNC	ENSG00000153814.13	novel	2919	4	NA	NA	-23	-70112	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	43	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTCACCAGTTTTACT	NA	False	NA	NA	False	AATAAA	-22	NA	28180818	27965330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_27965542_27991908_27991982_28180462
transcript_128463.known	chr7	-	1739	13	FSM	ENSG00000106066.15	ENST00000396276.7	1739	13	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_12	137.376813505369	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGCTTTTGTTTTTGGGG	-29142948	True	NA	38	True	AATAAA	-18	NA	29146497	28995630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146340
transcript_128477.known	chr7	-	2087	13	FSM	ENSG00000106066.15	ENST00000265394.10	2087	13	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_12	62.0785233035996	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATGATGAGTCAATTCTT	-29142988	True	NA	NA	False	AATAAA	-17	NA	29146537	28995234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_28995883_29030576_29030760_29064060_29064235_29066022_29066122_29071772_29071905_29072300_29072424_29086483_29086551_29092622_29092703_29095083_29095143_29096102_29096218_29112703_29112823_29120892_29121072_29146428
transcript_128478.known	chr7	-	561	3	FSM	ENSG00000106066.15	ENST00000455893.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	276	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAAGTGAGCTTTTGTTT	-29071884	False	NA	32	True	AATAAA	-12	NA	29071904	28995636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_28995883_29030576_29030760_29071772
transcript_128483.nnic	chr7	+	992	3	NNC	ENSG00000106069.24	novel	425	3	NA	NA	-37	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGGGTACCCTGTAT	29146040	True	NA	NA	False	ATTAAA	-19	NA	29146531	29148658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_29146746_29146848_29146961_29147992
transcript_128484.known	chr7	+	425	3	FSM	ENSG00000106069.24	ENST00000461824.1	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	9.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTGGGGTACCCTGTA	29146097	True	NA	NA	False	ATTAAA	-18	NA	29146588	29148657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29146746_29146848_29146961_29148501
transcript_128486.nnic	chr7	+	570	3	NNC	ENSG00000106069.24	novel	425	3	NA	NA	1	6561	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTATTATTATTATCTAA	29146098	True	NA	NA	False	AATAAA	-15	NA	29146589	29155218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_29146746_29146848_29146961_29154916
transcript_128488.nnic	chr7	-	1194	6	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-28	4039	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	10.2371871136558	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563415	True	NA	-2	True	AATAAA	-20	NA	29563719	29510184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510412_29510502_29510641_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_12849.known	chr1	+	1931	12	FSM	ENSG00000117523.18	ENST00000476522.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.5871317979271	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTAGAACGGCAGAAAGAAAA	171470369	True	NA	-25	True	AAAAAG	-9	NA	171485550	171532792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517590_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_128495.nnic	chr7	-	1056	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-28	4039	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	8.8423695919137	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563415	True	NA	-2	True	AATAAA	-20	NA	29563719	29510184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510412_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_128497.nnic	chr7	-	1076	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-28	4039	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.70502447189084	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563415	True	NA	-2	True	AATAAA	-20	NA	29563719	29510184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510432_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_128498.nnic	chr7	-	1285	5	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-28	4039	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.2736184954957	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563415	True	NA	-2	True	AATAAA	-20	NA	29563719	29510184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510641_29512811_29512984_29515056_29515318_29561858_29561923_29563387
transcript_1285.known	chr1	+	932	5	FSM	ENSG00000069424.16	ENST00000652845.1	932	5	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	7.28010988928052	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGTTTGTGAAATCAT	6026009	True	NA	NA	False	NA	NA	NA	6026346	6082816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6026446_6040516_6040646_6072754_6072799_6073732_6073771_6082194
transcript_12850.known	chr1	+	1919	12	NNC	ENSG00000117523.18	novel	1931	12	NA	NA	0	-17	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	18.9104020524452	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAAAGAAAAAGAACTA	171470369	True	NA	-42	True	AAGAAA	-7	NA	171485550	171532775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_171485736_171512031_171512201_171512994_171513173_171514535_171514631_171515733_171515860_171517585_171517815_171522176_171522260_171523220_171523355_171523434_171523523_171524820_171524966_171527790_171527845_171532342
transcript_128501.nnic	chr7	-	1010	4	NNC	ENSG00000223813.4	novel	1397	2	NA	NA	-26	4039	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	9.7410927974683	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563413	True	NA	-2	True	AATAAA	-20	NA	29563717	29510184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510432_29512811_29512984_29515056_29515318_29563387
transcript_128502.nnic	chr7	-	1219	4	NNC	ENSG00000223813.4	novel	1397	2	NA	NA	-26	4039	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	9.41629792788369	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTCGGGAGCAATTT	-29563413	True	NA	-2	True	AATAAA	-20	NA	29563717	29510184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29510641_29512811_29512984_29515056_29515318_29563387
transcript_128503.nnic	chr7	-	937	4	NNC	ENSG00000223813.4	novel	1434	3	NA	NA	-28	1520	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	0.942809041582063	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAATCAGCTTTTGG	-29563415	True	NA	NA	False	AATAAA	-23	NA	29563719	29512703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_29512984_29515056_29515318_29561858_29561923_29563387
transcript_128505.known	chr7	-	1434	3	FSM	ENSG00000223813.4	ENST00000447171.2	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTGACAGTATCAAGAA	-29563359	True	NA	NA	False	AATAAA	-16	NA	29563663	29514223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_29515318_29561858_29561923_29563387
transcript_128507.known	chr7	-	1376	2	FSM	ENSG00000223813.4	ENST00000450540.3	1397	2	21	0	-7	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGACAGTATCAAGA	-29563366	True	NA	NA	False	AATAAA	-15	NA	29563670	29514224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_29515318_29563387
transcript_128511.known	chr7	+	1652	2	FSM	ENSG00000176532.4	ENST00000319694.3	1652	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTAAGGTGACTTTTGTA	29563341	True	NA	6	True	ATTAAA	-16	NA	29563834	29567293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29564378_29566184
transcript_128514.nnic	chr7	+	387	2	NNC	ENSG00000227855.4	novel	995	2	NA	NA	-40	-420	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTATTGTAAAATACTGT	29684425	True	NA	NA	False	CATAAA	-30	NA	29684601	29687472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_29684795_29687278
transcript_128519.known	chr7	+	4184	9	FSM	ENSG00000122574.12	ENST00000242140.10	4225	9	46	-5	46	5	multi-exon	FALSE	canonical	1	1	junction_4	7.06664701255129	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCGTTTCCTTGTTAAA	29806080	True	NA	28	True	AATAAA	-22	NA	29806553	29917066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_29806679_29834667_29834815_29875829_29875963_29879008_29879141_29883849_29884594_29888067_29888218_29889305_29889408_29904285_29904363_29914492
transcript_12852.known	chr1	-	1738	9	FSM	ENSG00000117533.15	ENST00000474047.5	1738	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	41.1747419542612	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTAAATGCTTTTGTC	-171740486	True	NA	NA	False	AATGAA	-2	NA	171742060	171701091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_171702085_171704386_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_128520.known	chr7	+	2140	14	FSM	ENSG00000106086.20	ENST00000622102.4	2140	14	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_13	62.275015172964	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGAGTTTGTGGCCTGT	30025644	True	NA	19	True	AATAAA	-16	NA	30028360	30118345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30028803_30045084_30045202_30046209_30046366_30047831_30047957_30049223_30049383_30050433_30050475_30052708_30052867_30054708_30054866_30055256_30055343_30060883_30060943_30061896_30062028_30062671_30062743_30074070_30074133_30117969
transcript_128522.known	chr7	-	5254	8	FSM	ENSG00000136193.17	ENST00000242059.10	5254	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	39.3840328155501	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCAGTGGAGTGGCCTCT	-29980756	True	NA	-10	True	AATAAA	-16	NA	29989801	29920108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_29924116_29926451_29926633_29936555_29936722_29940681_29940877_29943976_29944180_29955178_29955361_29968908_29969069_29989641
transcript_128524.known	chr7	-	703	5	FSM	ENSG00000106080.11	ENST00000412494.1	703	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	63.103090257134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTATTTTTATACAATGT	-30023958	False	NA	NA	False	AATATA	-41	NA	30026419	30014670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30014894_30018995_30019124_30020212_30020305_30022664_30022817_30026311
transcript_128527.nnic	chr7	-	1287	4	NNC	ENSG00000106080.11	novel	751	2	NA	NA	-40	4664	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	55.7554182718296	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTCTGTCATTCTGT	NA	False	NA	NA	False	NA	NA	NA	30026742	30005922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_30006499_30018995_30019124_30022664_30022817_30026311
transcript_128528.nnic	chr7	-	1082	4	NNC	ENSG00000106080.11	novel	751	2	NA	NA	-40	4459	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	55.7554182718296	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGACTATCCT	NA	False	NA	NA	False	NA	NA	NA	30026742	30006127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_30006499_30018995_30019124_30022664_30022817_30026311
transcript_128529.known	chr7	-	4978	4	FSM	ENSG00000106080.11	ENST00000222803.10	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_2	8.16496580927726	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTTGTGAAAAATTCT	-30024241	True	NA	-4	True	AATAAA	-18	NA	30026702	30010586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30014894_30018995_30019124_30022664_30022817_30026311
transcript_128538.known	chr7	-	751	2	FSM	ENSG00000106080.11	ENST00000479939.1	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATACATAAAATTTTTCA	-30024175	True	NA	NA	False	NA	NA	NA	30026636	30022390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30022817_30026311
transcript_12854.known	chr1	-	1193	8	FSM	ENSG00000117533.15	ENST00000367740.2	1193	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.0848127514248	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCAGTAAATATATTTT	-171740500	True	NA	NA	False	ACTAAA	-3	NA	171742074	171703949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710713_171710815_171719170_171719219_171728523_171728571_171738348_171738464_171741909
transcript_128540.known	chr7	-	1085	3	FSM	ENSG00000106080.11	ENST00000419018.1	1085	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTAACTGGCTCTGA	-30024201	True	NA	NA	False	AATGAA	-6	NA	30026662	30014287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30014894_30018995_30019124_30026311
transcript_128541.known	chr7	+	5761	3	FSM	ENSG00000180354.16	ENST00000324453.13	5761	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTTTGCCTCTTTT	30134767	True	NA	24	True	ATTAAA	-16	NA	30134985	30162762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30135299_30146176_30146300_30157437
transcript_128542.known	chr7	+	843	2	FSM	ENSG00000180354.16	ENST00000409688.1	843	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTACTTTTTAAGTGTC	30134769	True	NA	NA	False	AAGAAA	-16	NA	30134987	30157969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30135299_30157437
transcript_128543.known	chr7	+	614	2	FSM	ENSG00000251660.1	ENST00000511893.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTAGACTTTGACCAAA	NA	False	NA	NA	False	CATAAA	-19	NA	30157530	30159534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30157596_30158985
transcript_128548.known	chr7	-	757	5	FSM	ENSG00000106100.11	ENST00000419799.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.44862367942584	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCCACCCAGCCTGACA	-30478280	True	NA	NA	False	NA	NA	NA	30478742	30456742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30457043_30459151_30459241_30459900_30460042_30463608_30463699_30478605
transcript_12855.known	chr1	-	586	8	FSM	ENSG00000117533.15	ENST00000482519.1	586	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	46.8736904578982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATGACAGAGATCTTCAT	-171740491	True	NA	NA	False	NA	NA	NA	171742065	171704504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_171704535_171706366_171706419_171709664_171709745_171710759_171710815_171719170_171719222_171728523_171728571_171738348_171738464_171741909
transcript_128551.known	chr7	+	2552	18	FSM	ENSG00000106105.15	ENST00000444666.6	2552	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	480.460505741996	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568316	True	NA	19	True	ATTAAA	-22	NA	30594896	30634033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30627056_30627191_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_128552.known	chr7	+	2536	18	FSM	ENSG00000106105.15	ENST00000675529.1	2536	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	469.439244367415	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCAGTGGCTGCCTGATTT	30568251	True	NA	-38	True	AAGAAA	-37	NA	30594831	30633976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30595823_30595934_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_128553.known	chr7	+	2437	17	FSM	ENSG00000106105.15	ENST00000389266.8	2437	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	313.92345802759	651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATCTATTTGCTTGT	30568297	True	NA	19	True	ATTAAA	-22	NA	30594877	30634033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615895_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_128558.known	chr7	-	556	7	FSM	ENSG00000196295.13	ENST00000582549.1	556	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6679686705368	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCCACCTGACTTCCCA	-30594074	True	NA	NA	False	NA	NA	NA	30594758	30578069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30584422_30584454_30584710_30584809_30585329_30585480_30594710
transcript_128566.known	chr7	-	431	5	FSM	ENSG00000196295.13	ENST00000583664.5	431	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8.78564169540279	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCACCTGACTTCCCACT	-30594076	True	NA	NA	False	NA	NA	NA	30594760	30578067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30578092_30579005_30579129_30579230_30579315_30585329_30585480_30594710
transcript_128567.known	chr7	-	890	4	FSM	ENSG00000196295.13	ENST00000580440.7	891	4	0	1	0	-1	multi-exon	FALSE	canonical	3	14	junction_1	6.68331255192114	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTTCATGTGACTTAA	-30594090	True	NA	-3	True	AATAAA	-39	NA	30594774	30577499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30578092_30579230_30579315_30585329_30585480_30594710
transcript_128571.known	chr7	-	836	2	FSM	ENSG00000006625.18	ENST00000409144.5	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGTTTAACCTGTTGT	-30496385	True	NA	15	True	AATAAA	-5	NA	30504801	30496632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30504568
transcript_128572.known	chr7	-	1012	3	FSM	ENSG00000006625.18	ENST00000440082.5	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_2	288.5	3805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30498802_30498939_30504568
transcript_128573.known	chr7	-	1158	4	FSM	ENSG00000006625.18	ENST00000275428.9	1158	4	0	0	0	0	multi-exon	FALSE	canonical	3	608	junction_3	167.476034769821	3688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTGTCTCTACTAAAGT	-30496413	True	NA	-5	True	AATAAA	-17	NA	30504829	30496620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30498802_30498939_30500535_30500682_30504568
transcript_128574.known	chr7	-	1032	3	FSM	ENSG00000006625.18	ENST00000005374.10	1032	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	301	789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTGTTGTCTCTACTAAA	-30496425	True	NA	-7	True	AATAAA	-15	NA	30504841	30496622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497236_30500535_30500682_30504568
transcript_128575.known	chr7	-	954	4	FSM	ENSG00000006625.18	ENST00000409436.2	954	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	277.64045494528	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAGAAAGTTGATATTC	-30496400	True	NA	NA	False	ATTAAA	-16	NA	30504816	30497472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_30497897_30498802_30498939_30500535_30500682_30504568
transcript_128576.known	chr7	+	1252	7	FSM	ENSG00000106105.15	ENST00000454308.6	1252	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	464.759585401121	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTTCACTGTTAGATT	30568283	True	NA	NA	False	AATAAA	-29	NA	30594863	30605448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30604989
transcript_128577.known	chr7	+	2276	17	FSM	ENSG00000106105.15	ENST00000676140.1	2276	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	421.168909108923	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTTGACCACTTGCGCTA	30568297	True	NA	NA	False	AAAAAG	-32	NA	30594877	30633874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30595144_30598795_30598898_30599946_30600050_30601058_30601201_30603033_30603123_30603495_30603573_30609584_30609731_30612095_30612246_30615897_30616059_30617113_30617279_30621392_30621501_30622316_30622463_30626233_30626320_30628559_30628670_30631447_30631542_30632246_30632438_30633734
transcript_128584.nnic	chr7	+	1510	3	Antisense	novelGene_ENSG00000106113.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCCTGAAGTCATAATT	30642065	True	NA	NA	False	AATAAA	-21	NA	30642335	30686771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_30642837_30654317_30654428_30685872
transcript_128596.known	chr7	+	2733	18	FSM	ENSG00000106125.14	ENST00000265299.6	2733	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	8.72097261329258	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAAGGGCCCAGGCTCAT	30771009	True	NA	NA	False	TATAAA	-16	NA	30771416	30892387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_30771557_30778431_30778552_30781976_30782213_30785748_30785993_30791164_30791575_30828678_30828738_30836657_30836765_30839199_30839317_30840759_30840849_30850453_30850556_30852215_30852280_30853393_30853460_30859256_30859325_30872242_30872307_30875494_30875657_30882180_30882362_30882920_30882994_30891956
transcript_128597.nic	chr7	+	668	2	ISM	ENSG00000106128.19	ENST00000461424.5	1054	9	11855	0	-257	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	30982859	True	NA	NA	False	AATAAA	-18	NA	30983823	30985216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_30984360_30985084
transcript_1286.known	chr1	+	448	2	FSM	ENSG00000069424.16	ENST00000655748.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTTTTGGTTTTCTTT	5992242	True	NA	NA	False	TATAAA	-23	NA	5992674	6018968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_6018634
transcript_128600.known	chr7	+	1768	5	FSM	ENSG00000106341.11	ENST00000342032.8	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	8.12403840463596	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	31686336	True	NA	15	True	AATAAA	-15	NA	31687214	31708455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_31687307_31692405_31692524_31695468_31695622_31696964_31697118_31707203
transcript_128602.known	chr7	+	569	4	FSM	ENSG00000106341.11	ENST00000409146.3	569	4	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_2	15.5205956357638	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAGGAGATGTATGCCAT	31686336	True	NA	NA	False	NA	NA	NA	31687214	31707409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_31687307_31692405_31692524_31696964_31697118_31707203
transcript_128603.nnic	chr7	+	1506	3	NIC	ENSG00000106341.11	novel	1768	5	NA	NA	-44	0	intron_retention	FALSE	canonical	1	5	junction_2	18.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTGTCCTCGTGCGTT	31686292	True	NA	15	True	AATAAA	-15	NA	31687170	31708455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_31687307_31692405_31692524_31707203
transcript_128604.nnic	chr7	-	757	4	Intergenic	novelGene_56	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	5.65685424949238	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTGTGGGTGTCATC	-32464892	True	NA	NA	False	ATTAAA	-15	NA	32465037	32441222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_-_32441503_32446516_32446575_32464524_32464789_32464882
transcript_128608.nnic	chr7	-	736	3	Intergenic	novelGene_57	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	6	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGCTTGAGAGACTTG	-32464892	True	NA	NA	False	AATAAA	-18	NA	32465037	32455712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_-_32456030_32464524_32464789_32464882
transcript_128616.known	chr7	-	1295	5	FSM	ENSG00000106355.10	ENST00000223084.7	1295	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	1060.04230458034	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32490758	False	NA	-6	True	AATAAA	-16	NA	32490863	32487034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490024
transcript_128617.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000410044.5	687	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1071.72862703205	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485211	True	NA	-6	True	AATAAA	-16	NA	32490361	32487034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490130
transcript_128618.known	chr7	-	687	5	FSM	ENSG00000106355.10	ENST00000409952.3	687	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	1070.43014134506	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATGAAAATAAAGGTGTTT	-32494790	True	NA	-34	True	AAAAAG	-23	NA	32495249	32487062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32494990
transcript_128626.known	chr7	-	2214	5	FSM	ENSG00000106355.10	ENST00000450169.7	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_4	68.1945745642569	3842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTATGTTTTCTGCGTTTG	-32485230	True	NA	-5	True	NA	NA	NA	32490380	32485337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32490319
transcript_128627.known	chr7	-	740	5	FSM	ENSG00000106355.10	ENST00000409909.7	740	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	1055.71406521842	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGATTTTTCTTCTGATT	-32494824	True	NA	-5	True	ATTAAA	-18	NA	32495283	32486804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32488624_32488653_32489248_32489345_32495229
transcript_128628.known	chr7	-	504	4	FSM	ENSG00000106355.10	ENST00000409987.5	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1143.69586089232	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATTTTGTTTATTCTA	-32485230	True	NA	-6	True	AATAAA	-16	NA	32490380	32487034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32487294_32487684_32487758_32489233_32489345_32490319
transcript_128629.known	chr7	-	1736	3	FSM	ENSG00000106355.10	ENST00000480956.1	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	2334	junction_2	57.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAGATGAAAATAAAGGTGT	-32485221	True	NA	-36	True	AAAAAG	-21	NA	32490371	32487064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32488653_32489248_32489345_32490319
transcript_128633.known	chr7	+	6987	16	FSM	ENSG00000105778.20	ENST00000318709.9	6987	16	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_11	16.4673414166748	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTCCTAGAAGTACCCTG	32488239	True	NA	27	True	AATAAA	-36	NA	32495488	32588726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580218_32580273_32580801_32580891_32583791
transcript_128637.known	chr7	+	4336	15	FSM	ENSG00000105778.20	ENST00000409301.5	4336	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	36.2644060044714	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTTAATATCACTTG	32488276	True	NA	11	True	AATAAA	-21	NA	32495525	32586166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_32495803_32543140_32543262_32544693_32544780_32548846_32548919_32551333_32551424_32552228_32552296_32553726_32553768_32554557_32554597_32558558_32558629_32558928_32559465_32570019_32570155_32573198_32573419_32575954_32576073_32580801_32580891_32583791
transcript_12864.nnic	chr1	-	845	4	NNC	ENSG00000117533.15	novel	4977	8	NA	NA	-13	-23073	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	68.585712797929	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTTGGTGTAAGTTTACAA	-171742070	False	NA	NA	False	AATAAA	-18	NA	171742087	171727577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_171728083_171728523_171728571_171738348_171738464_171741909
transcript_128643.known	chr7	+	472	1	FSM	ENSG00000273014.1	ENST00000609151.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTCAAATGTATTA	NA	False	NA	11	True	ATTAAA	-30	NA	32758881	32759353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_32758900_32759400
transcript_128646.known	chr7	-	3608	4	FSM	ENSG00000170852.12	ENST00000304056.9	3608	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	6.0184900284226	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTATTTTTCTTTTGTTA	-32891731	False	NA	-19	True	AATAAA	-15	NA	32891760	32868171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_32870881_32874991_32875158_32879434_32879943_32891535
transcript_12865.nnic	chr1	-	772	4	NNC	ENSG00000117533.15	novel	4977	8	NA	NA	-13	-23146	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	68.585712797929	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGTGTGCAGGTTTTT	-171742070	False	NA	NA	False	TATAAA	-11	NA	171742087	171727650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_171728083_171728523_171728571_171738348_171738464_171741909
transcript_128656.known	chr7	-	1742	10	FSM	ENSG00000122643.23	ENST00000456458.5	1742	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_8	102.625653183588	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058989	True	NA	-19	True	AATAAA	-24	NA	33062796	33014129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33035933_33035989_33062567
transcript_128657.known	chr7	-	1667	9	FSM	ENSG00000122643.23	ENST00000610140.7	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_8	29.2123154679666	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGTCAAAACTATCT	-33058969	True	NA	-19	True	AATAAA	-24	NA	33062776	33014129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33014832_33015669_33015871_33017438_33017602_33019634_33019725_33021271_33021358_33022052_33022100_33024038_33024109_33026816_33026916_33062567
transcript_128674.known	chr7	-	1135	6	FSM	ENSG00000164610.10	ENST00000297157.8	1135	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_5	28.5965032827442	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGTATTTATTTATGA	-33106874	True	NA	0	True	AATAAA	-23	NA	33109404	33094796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_33095433_33096492_33096555_33097270_33097363_33099306_33099437_33100530_33100562_33109220
transcript_12868.nnic	chr1	-	556	3	NNC	ENSG00000117533.15	novel	4977	8	NA	NA	-13	-27586	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	79	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTAGATTTTTTTGTGTG	-171742070	False	NA	NA	False	AATAAA	-26	NA	171742087	171732090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_171732354_171738348_171738464_171741909
transcript_128685.nnic	chr7	+	1733	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-77	0	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	38.2034837788324	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	33348470	True	NA	NA	False	AATAAA	-20	NA	33351849	33605632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_128686.nnic	chr7	+	1872	10	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-77	0	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	38.2034837788324	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAACTTTCATGTGA	33348470	True	NA	-4	True	AATAAA	-7	NA	33351849	33605771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_128697.nic	chr7	+	1715	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	84.2614977317636	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGGATTTTATTTATA	33348473	True	NA	NA	False	AATAAA	-20	NA	33351852	33605632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_128698.nic	chr7	+	1854	9	NIC	ENSG00000122507.21	novel	549	5	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	96	junction_1	84.2614977317636	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGAAACTTTCATGTGA	33348473	True	NA	-4	True	AATAAA	-7	NA	33351852	33605771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991_33388145_33505462_33505646_33533953_33534177_33604864_33604976_33605194
transcript_1287.known	chr1	+	617	3	FSM	ENSG00000069424.16	ENST00000657222.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATTCTTCTTTTGGTTT	5992290	True	NA	NA	False	TATAAA	-18	NA	5992722	6018963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_5992789_5995862_5996085_6018634
transcript_128712.nnic	chr7	+	2226	6	NIC	ENSG00000122507.21	novel	549	5	NA	NA	30	-949	combination_of_known_splicesites	FALSE	canonical	3	258	junction_1	45.1353519981843	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTCA	33348577	True	NA	NA	False	NA	NA	NA	33351956	33389699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_33352050_33352858_33352874_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_128717.known	chr7	+	549	5	FSM	ENSG00000122507.21	ENST00000627264.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	116.362579895772	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTAGAAGAACTCTTA	33348547	True	NA	NA	False	GATAAA	-6	NA	33351926	33388007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_33352050_33357854_33357996_33367766_33367863_33383665_33383839_33387991
transcript_12872.nic	chr1	+	2409	9	NIC	ENSG00000010165.20	novel	3368	8	NA	NA	6	56	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	105.339258469955	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTGGGTTGGTTTGTCT	171776331	True	NA	29	True	AATAAA	-31	NA	171781669	171796959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_171781796_171781987_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_128731.nnic	chr7	+	1209	2	NNC	ENSG00000236212.2	novel	1600	2	NA	NA	-34370	-462	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCATTGATATTTTGAGAT	34174788	True	NA	4	True	AATAAA	-16	NA	34175094	34298550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_34175332_34297578
transcript_12874.known	chr1	+	2865	8	FSM	ENSG00000010165.20	ENST00000367737.9	2865	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	121.278731079464	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	171776357	True	NA	8	True	ATTAAA	-17	NA	171781695	171797717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171782121_171783739_171784040_171785886_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_128741.known	chr7	+	860	3	FSM	ENSG00000287249.1	ENST00000659178.1	860	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGGCTTCTGTGTTGTTGT	35036803	True	NA	NA	False	AAGAAA	-25	NA	35036835	35125012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35036922_35102465_35102558_35124330
transcript_128742.known	chr7	+	4200	1	FSM	ENSG00000271122.1	ENST00000605778.1	4200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTTGTAAATAATGGTT	35694752	True	NA	NA	False	AATAAA	-18	NA	35695213	35699413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35695200_35699400
transcript_128743.known	chr7	-	3845	6	FSM	ENSG00000228878.9	ENST00000412856.6	3845	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.13541565040626	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATGTATCAATAAAACAC	-35800562	True	NA	NA	False	TTTAAA	-30	NA	35800608	35751907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_35755196_35755732_35755818_35758178_35758274_35781208_35781346_35793905_35794023_35800485
transcript_128752.known	chr7	+	1464	14	FSM	ENSG00000122545.21	ENST00000635175.1	1464	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	408.407514897623	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCCATAATGATGGAT	35783521	True	NA	NA	False	NA	NA	NA	35801218	35904385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35831424_35831497_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_128758.known	chr7	+	4350	13	NNC	ENSG00000122545.21	novel	4399	13	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	367.745411256211	943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCTCCAATGAATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	35800985	35907105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_35801271_35832792_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_128760.known	chr7	+	1584	12	FSM	ENSG00000122545.21	ENST00000435235.6	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	366.627155396842	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTAAGTACCTTTCCTACA	35799720	True	NA	NA	False	NA	NA	NA	35801038	35904500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_128762.known	chr7	+	4399	13	FSM	ENSG00000122545.21	ENST00000399034.7	4399	13	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	285.620219386202	1329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGCTCCAATGAATTAT	NA	False	NA	NA	False	AATAAA	-15	NA	35800931	35907105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35832797_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822_35879941_35882483_35882577_35883890_35883988_35885827_35885880_35890667_35890794_35898247_35898384_35903075_35903216_35904253
transcript_128766.known	chr7	+	583	6	FSM	ENSG00000122545.21	ENST00000634600.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	2	20	junction_1	532.245582414735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAGGAATGCCAACAGTT	35783518	True	NA	NA	False	AAAAAG	-42	NA	35801215	35879910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_35801271_35832803_35832901_35863551_35863659_35872665_35872767_35873640_35873776_35879822
transcript_12877.known	chr1	+	3368	8	FSM	ENSG00000010165.20	ENST00000361735.4	3368	8	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_4	12.8714206437267	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTTGAATTTTGTCTTT	171776321	True	NA	7	True	ATTAAA	-16	NA	171781659	171797716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171782121_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_128772.known	chr7	+	4731	24	FSM	ENSG00000011426.11	ENST00000265748.7	4731	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	89.0889405003264	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTTTAGGAAGCACT	36384746	True	NA	38	True	AATAAA	-23	NA	36389861	36453791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_36390045_36396265_36396420_36399078_36399394_36406180_36406567_36407733_36407957_36410513_36410705_36411058_36411167_36415757_36415885_36417079_36417191_36419243_36419480_36420168_36420315_36420596_36420745_36421856_36421993_36422632_36422810_36423816_36423944_36424544_36424594_36424685_36424743_36425701_36425741_36426014_36426037_36426915_36427029_36439203_36439291_36443754_36443863_36449664_36449838_36452476
transcript_128776.nic	chr7	+	847	3	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-41	54285	-41	3085	5prime_fragment	FALSE	canonical	3	418	junction_2	6.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGAGTATCCTTTGCT	36384664	True	NA	NA	False	AATAAA	-18	NA	36389779	36399506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_36390045_36396265_36396420_36399078
transcript_128777.nic	chr7	+	1622	2	ISM	ENSG00000011426.11	ENST00000396068.6	4661	23	-41	56169	-41	1201	5prime_fragment	FALSE	canonical	3	431	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAGCCAAGTGTAG	36384664	True	NA	NA	False	AATAAA	-16	NA	36389779	36397622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_36390045_36396265
transcript_128779.known	chr7	-	5092	22	FSM	ENSG00000155849.16	ENST00000310758.9	5092	22	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_21	10.3321263284534	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGATGTTTAAATTCC	-37446470	True	NA	NA	False	AATAAA	-20	NA	37448864	36852905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_12878.known	chr1	+	3022	8	FSM	ENSG00000010165.20	ENST00000362019.7	3022	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	115.712345662749	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGAATTTTGTCTTTC	171776343	True	NA	8	True	ATTAAA	-17	NA	171781681	171797717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_171781796_171783739_171784500_171785878_171786079_171787734_171787931_171790451_171790617_171792016_171792236_171794395_171794528_171796481
transcript_128780.known	chr7	-	2621	22	FSM	ENSG00000155849.16	ENST00000448602.5	2621	22	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_21	21.803180612178	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGGCCGGGCCCAGACATG	NA	False	NA	NA	False	NA	NA	NA	37449223	36855550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_36855752_36861658_36861737_36870392_36870476_36878009_36878118_36887559_36887673_36894853_36895018_37013298_37013436_37096618_37096728_37133129_37133235_37211385_37211518_37213334_37213458_37216644_37216696_37222614_37222694_37224878_37225031_37233094_37233195_37244355_37244392_37259180_37259351_37271831_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448859
transcript_128782.known	chr7	-	2876	5	FSM	ENSG00000155849.16	ENST00000463390.1	2876	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	12.6367519561001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-37446462	True	NA	NA	False	NA	NA	NA	37448856	37269453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_37271883_37314849_37314923_37315919_37315961_37342612_37342764_37448674
transcript_128784.known	chr7	-	591	2	FSM	ENSG00000155849.16	ENST00000479447.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTTAAACCCAGGTGT	-37446556	True	NA	NA	False	NA	NA	NA	37448950	37429256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_37429757_37448859
transcript_128785.known	chr7	+	413	4	FSM	ENSG00000187037.9	ENST00000467202.1	413	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAATCTGATTGGTGTTA	37683847	False	NA	NA	False	AATAAA	-26	NA	37683865	37713510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_37683904_37685459_37685584_37709717_37709800_37713341
transcript_128786.known	chr7	+	2515	3	FSM	ENSG00000086289.12	ENST00000199448.9	2515	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	5.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTGTTATCCTCTCT	37920137	True	NA	NA	False	AATAAA	-24	NA	37920639	37951936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_37921209_37948839_37949049_37950199
transcript_128789.known	chr7	+	1703	9	FSM	ENSG00000010270.14	ENST00000009041.12	1703	9	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	36.4243651283039	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGCTGTTTTTTCA	38174473	True	NA	7	True	ATTAAA	-14	NA	38178244	38230669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_128793.known	chr7	+	1365	10	FSM	ENSG00000010270.14	ENST00000396013.5	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	133.492497592862	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGTGTAATAAAATCTG	38174579	True	NA	-24	True	NA	NA	NA	38178350	38230381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38178421_38179089_38179146_38207446_38207730_38214356_38214435_38215027_38215106_38217024_38217079_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_128810.known	chr7	+	1341	8	FSM	ENSG00000010270.14	ENST00000434197.5	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	113.590025431598	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAAGTGTAATAAAATC	38174491	True	NA	-26	True	NA	NA	NA	38178262	38230379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38178421_38207446_38207730_38214356_38214435_38215027_38215106_38217187_38217306_38219564_38219661_38228798_38228872_38229922
transcript_128824.nnic	chr7	+	941	4	FSM	ENSG00000281103.3	ENST00000687516.1	1007	4	46	20	-16	-3	multi-exon	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAAATAGTCAATTATT	38330925	True	NA	NA	False	GATAAA	-19	NA	38331094	38342702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38331397_38332791_38332874_38336716_38336827_38342255
transcript_128825.nnic	chr7	+	715	4	NIC	ENSG00000281103.3	novel	581	3	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGGTTGTATGTCCTT	38330925	True	NA	NA	False	AATAAA	-17	NA	38331094	38373585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_38331397_38332791_38332874_38336716_38336827_38373364
transcript_128828.nnic	chr7	+	906	3	FSM	ENSG00000281103.3	ENST00000690659.1	979	3	70	3	-1	-3	multi-exon	FALSE	canonical	2	3	junction_2	6.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAAATAGTCAATTATT	NA	False	NA	NA	False	GATAAA	-19	NA	38331047	38342702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38331397_38336716_38336827_38342255
transcript_128829.nnic	chr7	+	680	3	FSM	ENSG00000281103.3	ENST00000691500.1	581	3	-99	0	-1	0	multi-exon	FALSE	canonical	2	6	junction_2	5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGAGGTTGTATGTCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	38331047	38373585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38331397_38336716_38336827_38373364
transcript_128830.nnic	chr7	+	1372	3	NIC	ENSG00000281103.3	novel	979	3	NA	NA	-1	-2158	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTGTAAAACAGCCTC	NA	False	NA	NA	False	NA	NA	NA	38331047	38376469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_38331397_38336716_38336827_38375556
transcript_128831.known	chr7	+	670	2	FSM	ENSG00000281103.3	ENST00000629576.2	1019	2	211	138	-38	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAAATAGTCAATTATT	NA	False	NA	NA	False	GATAAA	-19	NA	38341576	38342702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_38341800_38342255
transcript_128835.known	chr7	-	5854	29	FSM	ENSG00000006715.16	ENST00000310301.9	5854	29	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_15	17.0430128121258	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-38903776	True	NA	NA	False	AATAAA	-13	NA	38909191	38722973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_38726327_38726908_38726989_38728541_38728587_38728691_38728792_38741984_38742122_38743401_38743543_38745558_38745614_38752175_38752314_38754701_38754753_38754894_38754937_38756837_38756983_38758353_38758482_38763454_38763548_38765579_38765662_38767536_38767599_38771197_38771255_38772521_38772638_38774114_38774245_38776678_38776777_38789800_38789868_38795464_38795612_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_128842.known	chr7	-	769	10	FSM	ENSG00000006715.16	ENST00000265745.13	769	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.616086374586	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGACATGTATCCCTGC	-38903776	True	NA	NA	False	NA	NA	NA	38909191	38795541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_38795612_38796414_38796527_38796744_38796865_38817816_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_128844.nnic	chr7	-	923	8	NNC	ENSG00000006715.16	novel	5854	29	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.0580010901315	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATGGTCTATTTATGT	-38903783	True	NA	NA	False	AATAAA	-13	NA	38909198	38722973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_38723465_38817858_38817883_38821202_38821266_38830253_38830329_38862544_38862623_38869145_38869254_38898090_38898130_38909153
transcript_128852.nnic	chr7	+	1495	3	NNC	ENSG00000106536.21	novel	1578	6	NA	NA	-23	-45584	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACATAGACTACTACT	39012690	True	NA	NA	False	AAGAAA	-37	NA	39013057	39087082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_39013210_39013439_39013560_39085859
transcript_128854.nic	chr7	+	1684	2	ISM	ENSG00000106536.21	ENST00000517348.1	1578	6	18	286626	18	-45584	5prime_fragment	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTACATAGACTACTACT	39012731	True	NA	NA	False	AAGAAA	-37	NA	39013098	39087082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_39013560_39085859
transcript_128861.nnic	chr7	-	541	4	NNC	ENSG00000233854.2	novel	1633	6	NA	NA	-14	-13283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGTGTGTGTGTGTG	-39013242	True	NA	NA	False	ATTAAA	-18	NA	39013565	38993652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_38993874_39002011_39002073_39005062_39005213_39013456
transcript_128865.known	chr7	+	871	3	FSM	ENSG00000241127.8	ENST00000223273.7	871	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	20	1952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTGTCACTGGTAATT	39562648	True	NA	NA	False	ATTAAA	-17	NA	39566403	39572881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39566548_39570505_39570628_39572276
transcript_128868.known	chr7	+	660	2	FSM	ENSG00000241127.8	ENST00000474392.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTAATTTACTTTAGTCC	39562629	True	NA	NA	False	GATAAA	-4	NA	39566384	39571002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39566548_39570505
transcript_128875.known	chr7	+	705	3	FSM	ENSG00000006451.8	ENST00000468201.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	512	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTCAAATTTACTTTAAAA	39614894	True	NA	95	True	ACTAAA	-24	NA	39623564	39706391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39623826_39696684_39696860_39706122
transcript_128878.known	chr7	+	2787	5	FSM	ENSG00000006451.8	ENST00000005257.7	2787	5	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_3	31.2209865314983	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTGGTGTTACTTGAT	39614901	True	NA	16	True	AATAAA	-16	NA	39623571	39708120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39623826_39686630_39686782_39690381_39690591_39696684_39696860_39706122
transcript_128879.known	chr7	+	768	5	FSM	ENSG00000006451.8	ENST00000434466.1	768	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	506.290677378124	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGCTTAATTGACTGA	39686620	True	NA	12	True	AATAAA	-22	NA	39686686	39706308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_39686782_39690381_39690591_39696684_39696860_39697407_39697511_39706122
transcript_128880.known	chr7	-	7627	2	FSM	ENSG00000168303.9	ENST00000306984.8	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	0	882	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATATTTACTTTCTCTTC	-40122638	True	NA	NA	False	ATTAAA	-18	NA	40134622	40126026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_40133260_40134228
transcript_128881.known	chr7	+	1563	15	FSM	ENSG00000175600.16	ENST00000628514.3	1563	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	21.6645341703053	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	40134384	True	NA	NA	False	NA	NA	NA	40135004	40860631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40684055_40684134_40749433_40749498_40860315
transcript_128884.known	chr7	+	1617	14	FSM	ENSG00000175600.16	ENST00000335693.9	1617	14	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_8	11.4555999070659	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134384	True	NA	14	True	AATAAA	-25	NA	40135004	40860763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_128885.nnic	chr7	+	1574	14	NNC	ENSG00000175600.16	novel	1617	14	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	22.4802345794158	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134331	True	NA	14	True	AATAAA	-25	NA	40134951	40860763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40617397_40617405_40749433_40749498_40860315
transcript_128887.nnic	chr7	+	1443	13	NNC	ENSG00000175600.16	novel	1593	13	NA	NA	-53	71651	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	18.5846412095819	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTGTATTATGCTTTG	40134331	True	NA	NA	False	AATAAA	-17	NA	40134951	40571165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40570880
transcript_128889.known	chr7	+	1341	13	FSM	ENSG00000175600.16	ENST00000401647.7	1341	13	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	15.8804124631572	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAATGAATCTAGTGCC	40134384	True	NA	NA	False	NA	NA	NA	40135004	40860631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40316759_40316856_40449286_40449359_40459100_40459199_40496283_40496387_40749433_40749498_40860315
transcript_128890.nnic	chr7	+	1430	13	NNC	ENSG00000175600.16	novel	1617	14	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	25.193694096385	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	40134331	True	NA	14	True	AATAAA	-25	NA	40134951	40860763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40316759_40316856_40449286_40449359_40459100_40459199_40617397_40617405_40749433_40749498_40860315
transcript_128893.nic	chr7	+	1143	10	NIC	ENSG00000175600.16	novel	1593	13	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	20.8474766806589	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATCTTTGTCTAAATCTG	40134331	True	NA	NA	False	AATAAA	-29	NA	40134951	40388158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_40135121_40180946_40180999_40181954_40182029_40188494_40188581_40189543_40189595_40194939_40195061_40237634_40237727_40274512_40274657_40316759_40316856_40387900
transcript_128895.nnic	chr7	+	670	3	NNC	ENSG00000175600.16	novel	1341	13	NA	NA	-92410	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTCCTTATTCTACTTA	NA	False	NA	14	True	AATAAA	-25	NA	40700771	40860763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_40700930_40749433_40749498_40860315
transcript_128902.known	chr7	-	1453	9	FSM	ENSG00000106588.12	ENST00000436986.5	1453	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	5187.09591046618	2588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATACTTAAGTGTCAAA	-42890159	True	NA	-27	True	AATAAA	-3	NA	42932154	42916881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42931095_42931156_42932117
transcript_128908.known	chr7	-	1397	7	FSM	ENSG00000256646.8	ENST00000677581.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	4502.62562906973	1433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	-42890219	True	NA	-6	True	AATAAA	-24	NA	42932214	42916860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42932117
transcript_128911.known	chr7	-	683	6	FSM	ENSG00000106588.12	ENST00000445517.1	683	6	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_5	4718.70369487214	1484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTCCAGCCTTTTAGGAG	-42890190	True	NA	-41	True	AATAAA	-12	NA	42932185	42917412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42932117
transcript_128915.known	chr7	-	1743	2	FSM	ENSG00000136197.14	ENST00000438029.1	1743	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTGTGGAAGTAAGT	-42910796	True	NA	NA	False	ACTAAA	-13	NA	42911910	42909621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42910922_42911467
transcript_128916.known	chr7	-	578	2	FSM	ENSG00000136197.14	ENST00000432637.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTGTTCTTCATGTCTT	-42910830	True	NA	NA	False	NA	NA	NA	42911944	42910645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42911194_42911914
transcript_128918.known	chr7	-	1823	2	FSM	ENSG00000136197.14	ENST00000447342.5	1823	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTTTTTCATTGTAT	-42911998	False	NA	-3	True	ATTAAA	-17	NA	42912090	42909274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42910922_42911914
transcript_128919.known	chr7	-	1434	8	FSM	ENSG00000106588.12	ENST00000223321.9	1434	8	0	0	0	0	multi-exon	FALSE	canonical	3	11145	junction_7	556.825623970561	26587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTAAGGCTCTTGT	-42890179	True	NA	-6	True	AATAAA	-24	NA	42932174	42916860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42926535_42926669_42927382_42927460_42932117
transcript_128920.known	chr7	-	1289	7	FSM	ENSG00000106588.12	ENST00000457444.6	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	4377.17160072829	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTATGGCTTAAGGCTC	-42890171	True	NA	-10	True	AATAAA	-20	NA	42932166	42916864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_42917691_42917777_42917836_42921857_42921932_42923324_42923407_42924674_42924798_42927382_42927460_42932117
transcript_128925.known	chr7	+	859	3	FSM	ENSG00000106591.4	ENST00000223324.3	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	1207	junction_1	5.5	13951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTTTGGCTTTGGT	42919633	True	NA	21	True	AATAAA	-24	NA	42932375	42937857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_42932517_42934954_42935137_42937321
transcript_128926.known	chr7	+	2734	3	FSM	ENSG00000106591.4	ENST00000432845.1	2734	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	569.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGAAGATTCTTTATGTT	42919633	True	NA	NA	False	AGTAAA	-17	NA	42932375	42937627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_42932517_42934954_42937242_42937321
transcript_128930.known	chr7	+	2888	4	FSM	ENSG00000002746.15	ENST00000471043.1	2888	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.79271573232759	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAAGCCCTGA	43396603	True	NA	NA	False	GGGGCT	-31	NA	43396672	43440597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43396720_43396813_43396890_43407561_43407732_43438002
transcript_128941.known	chr7	-	1085	7	FSM	ENSG00000106603.20	ENST00000310564.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	552.461059462314	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714576	True	NA	-7	True	AATAAA	-17	NA	43729489	43639256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43650492_43650713_43729428
transcript_128950.known	chr7	-	524	6	FSM	ENSG00000106603.20	ENST00000415798.5	524	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	577.148299832894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTGGGAAGGTGACGG	-43714610	True	NA	NA	False	NA	NA	NA	43729523	43640572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43711399_43711450_43729428
transcript_128957.known	chr7	-	552	3	FSM	ENSG00000106603.20	ENST00000478504.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGGTTGGTTTATGTCA	-43714586	True	NA	NA	False	NA	NA	NA	43729499	43657221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43657270_43658711_43659145_43729428
transcript_128959.known	chr7	-	1737	7	FSM	ENSG00000106603.20	ENST00000415076.6	1737	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	435.677250572791	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTTGAATGTCATT	-43714600	True	NA	-3	True	AATAAA	-15	NA	43729513	43608455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43609496_43639448_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_128960.known	chr7	-	899	6	FSM	ENSG00000106603.20	ENST00000223336.11	899	6	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_5	57.9330648248476	10974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTTCTCATTTCTTTCC	-43714610	True	NA	-7	True	AATAAA	-17	NA	43729523	43639256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43639682_43640572_43640650_43645250_43645400_43647534_43647635_43648599_43648653_43729428
transcript_128965.known	chr7	+	1161	9	FSM	ENSG00000106605.11	ENST00000402924.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	201.749225525155	1165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755990	True	NA	NA	False	ATTAAA	-20	NA	43758686	43807342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43758735_43760016_43760111_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_128966.nnic	chr7	+	1258	8	NNC	ENSG00000106605.11	novel	757	3	NA	NA	-702	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	168.191824402729	1181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	NA	False	NA	NA	False	ATTAAA	-20	NA	43757977	43807342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_43758217_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_128970.known	chr7	+	1074	8	FSM	ENSG00000106605.11	ENST00000265523.9	1074	8	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	47.0075981700223	3408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATTGTTATGAGCTATG	43755983	True	NA	NA	False	ATTAAA	-20	NA	43758679	43807342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43758735_43771137_43771171_43787903_43788026_43791248_43791369_43792714_43792813_43800464_43800573_43803675_43803848_43806976
transcript_128988.known	chr7	-	3571	6	FSM	ENSG00000106608.17	ENST00000453200.6	3571	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	16.8095211115606	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906234	True	NA	NA	False	AATAAA	-16	NA	43906596	43875912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43906561
transcript_128989.known	chr7	-	885	6	FSM	ENSG00000106608.17	ENST00000426198.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	33.7852038620459	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGCCAGTTTGCACTC	-43926313	True	NA	NA	False	AAGAAA	-16	NA	43926411	43878843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887817_43926131
transcript_128993.known	chr7	-	365	5	FSM	ENSG00000106608.17	ENST00000446958.1	365	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	41.1969355656461	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACAATGTTCCTAGT	-43906583	False	NA	NA	False	AATAAA	-22	NA	43906627	43881137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43881276_43881658_43881698_43881906_43881958_43887414_43887486_43906561
transcript_128995.known	chr7	-	729	4	FSM	ENSG00000062582.14	ENST00000467084.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	642.618082534253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCGTGGGCTACAGTG	NA	False	NA	NA	False	NA	NA	NA	43869893	43866804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869523
transcript_12900.nnic	chr1	-	913	3	NIC	ENSG00000135845.10	novel	1661	5	NA	NA	-56	-617	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCCAATGATAAATTT	-172442574	True	NA	NA	False	AATAAA	-21	NA	172444142	172393750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_172394411_172399818_172399917_172443987
transcript_129000.known	chr7	-	667	4	FSM	ENSG00000062582.14	ENST00000317534.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	1000	junction_3	172.762521655852	9783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCCTCTCTGTTTTTAC	-43861066	True	NA	-9	True	AATAAA	-15	NA	43869517	43866557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962_43869075_43869307_43869377_43869456
transcript_129001.known	chr7	-	743	3	FSM	ENSG00000062582.14	ENST00000418740.5	743	3	0	0	0	0	multi-exon	FALSE	canonical	3	1329	junction_2	33	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTTGCCTCTCTGTTT	-43861066	True	NA	-13	True	AATAAA	-11	NA	43869517	43866561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962_43869075_43869307
transcript_129002.known	chr7	-	3596	6	FSM	ENSG00000106608.17	ENST00000443736.5	3596	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	30.2549169557611	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGCACAAGTGATGGTA	-43906582	False	NA	NA	False	AATAAA	-16	NA	43906626	43875912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43879261_43881658_43881698_43881906_43881958_43887414_43887486_43887789_43887812_43906561
transcript_129003.known	chr7	-	392	2	FSM	ENSG00000062582.14	ENST00000483330.1	392	2	0	0	0	0	multi-exon	FALSE	canonical	3	1395	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCTACTTTTACAAAT	-43860698	False	8451	NA	False	NA	NA	NA	43869149	43866777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_43866983_43868962
transcript_129006.known	chr7	+	3982	7	FSM	ENSG00000078967.13	ENST00000222402.8	3982	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	8.73053390247253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGTCAATGATTTCCT	43925730	True	NA	13	True	TATAAA	-20	NA	43926435	43956136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631_43948738_43950598_43950693_43952649
transcript_129008.nnic	chr7	-	1556	7	Fusion	ENSG00000239556.4_ENSG00000241057.2	novel	1148	7	NA	NA	3833	696	multi-exon	TRUE	canonical	0	0	junction_6	5.04700130990891	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCCTTGCTTTCTTTG	NA	False	NA	-12	True	AATAAA	-21	NA	43986374	43960893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_43961746_43961972_43962091_43965866_43965962_43966263_43966396_43972629_43972692_43973209_43973324_43986191
transcript_129011.known	chr7	+	783	5	FSM	ENSG00000078967.13	ENST00000446008.5	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	2.34520787991171	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGGTTGAAGTTGAAGA	43925810	False	NA	4	True	AATAAA	-17	NA	43926515	43949199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43926557_43938430_43938495_43942825_43942858_43942953_43943032_43948631
transcript_129012.known	chr7	+	789	5	FSM	ENSG00000078967.13	ENST00000454350.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	12.9301005409857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCCTCAGCCTGGCCCC	43925736	True	NA	NA	False	NA	NA	NA	43926441	43953059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_43926557_43938430_43938495_43948631_43948738_43950598_43950693_43952649
transcript_129020.nic	chr7	-	538	4	ISM	ENSG00000214783.9	ENST00000427076.5	6466	16	-63	72667	-37	-47222	5prime_fragment	FALSE	canonical	3	79	junction_1	219.715472575076	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	44019212	44013561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_44013680_44014605_44014784_44016433_44016524_44019060
transcript_129025.nic	chr7	-	481	3	ISM	ENSG00000214783.9	ENST00000422304.1	974	9	-158	47222	-158	-47222	5prime_fragment	FALSE	canonical	3	76	junction_1	241	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCCAGTTTCTCATAATT	NA	False	NA	NA	False	ATTAAA	-18	NA	44019333	44013561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_44013680_44016433_44016524_44019060
transcript_129027.known	chr7	-	324	3	FSM	ENSG00000272655.2	ENST00000418424.2	324	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	226	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCGGGGCCTGGAGGGGC	-44018660	True	NA	NA	False	NA	NA	NA	44019113	44014602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44014784_44016433_44016524_44019060
transcript_129029.known	chr7	+	2068	13	FSM	ENSG00000136279.21	ENST00000468694.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	1	22	junction_8	132.494942251477	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGCCTGTTGTCTTCCCC	44041376	True	NA	-59	True	NA	NA	NA	44044710	44061637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058877_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_12903.known	chr1	-	744	2	FSM	ENSG00000135845.10	ENST00000478184.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTGATCTCATTGAT	-172442378	False	NA	NA	False	NA	NA	NA	172443946	172442330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_172442831_172443702
transcript_129030.known	chr7	+	2117	13	FSM	ENSG00000136279.21	ENST00000494774.5	2117	13	0	0	0	0	multi-exon	FALSE	canonical	1	98	junction_7	105.629955505055	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCAGTTTGGTCTACACA	44041382	True	NA	20	True	NA	NA	NA	44044716	44061716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_129034.known	chr7	+	1401	13	FSM	ENSG00000136279.21	ENST00000498733.5	1401	13	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	135.785446569211	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTCTCAGACATGGCTTC	44041367	True	NA	NA	False	NA	NA	NA	44044701	44060939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044867_44050224_44050281_44051829_44051943_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_129042.known	chr7	+	1513	12	FSM	ENSG00000136279.21	ENST00000452943.5	1513	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	144.548885036479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCTGCCTGTGGCCA	44041367	True	NA	NA	False	NA	NA	NA	44044701	44061172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44051829_44051943_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_129044.known	chr7	+	1622	12	FSM	ENSG00000136279.21	ENST00000429716.5	1622	12	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_2	122.184997253014	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGACCCTTGGGAACAGT	44041373	True	NA	NA	False	NA	NA	NA	44044707	44061328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_129048.known	chr7	+	1447	11	FSM	ENSG00000136279.21	ENST00000411855.5	1447	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	148.344902170584	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCATCTGGGAGGCTCTG	44041385	True	NA	NA	False	NA	NA	NA	44044719	44061237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050281_44056756_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_12905.known	chr1	-	1456	2	FSM	ENSG00000135845.10	ENST00000344529.5	1456	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTTGTCTCATGATTTT	-172442501	True	NA	-4	True	ATTAAA	-16	NA	172444069	172441456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_172442831_172443987
transcript_129050.known	chr7	+	1415	11	FSM	ENSG00000136279.21	ENST00000440166.5	1415	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	131.707858535472	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTTGCCCCTGACAGGA	44041341	True	NA	NA	False	NA	NA	NA	44044675	44061145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44052866_44052942_44056756_44056904_44057781_44057860_44058128_44058281_44058431_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_129055.known	chr7	-	837	3	FSM	ENSG00000164708.6	ENST00000297283.4	837	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	2.5	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAGTCCAGCGCAGCC	-44065369	True	NA	-1	True	AATAAA	-17	NA	44065567	44062726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44062931_44064831_44065013_44065115
transcript_129056.known	chr7	+	1854	11	FSM	ENSG00000136279.21	ENST00000441840.7	1854	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.731603904483	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTTCAGGAAAAGTAACAC	44041351	True	NA	65	True	NA	NA	NA	44044685	44061609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44044821_44050224_44050265_44056739_44056904_44057781_44057860_44058128_44058281_44058428_44058481_44058901_44058984_44059353_44059450_44059542_44059659_44060047_44060154_44060776
transcript_129057.known	chr7	-	2561	11	FSM	ENSG00000122678.17	ENST00000430942.5	2561	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	20.7566856699233	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACATGCAGTAAAGTTGA	-44081286	True	NA	NA	False	ATTAAA	-11	NA	44082514	44072261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074130_44074221_44074397_44074531_44076508_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_129059.known	chr7	-	2444	10	FSM	ENSG00000122678.17	ENST00000335195.10	2444	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.2379000772445	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTCTTGGGGTGCAGT	-44081236	True	NA	NA	False	ATTAAA	-26	NA	44082464	44072246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44073378_44073624_44073709_44073782_44074026_44074397_44074523_44076508_44076630_44078739_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_12906.known	chr1	+	5495	22	FSM	ENSG00000094975.14	ENST00000616058.4	5495	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	42.583944042907	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTACTGGCTCTTCTGTCT	172529891	True	NA	28	True	AATAAA	-21	NA	172533117	172611831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_172533498_172551511_172551627_172553259_172553371_172555868_172556024_172557279_172557418_172557643_172557795_172569018_172569143_172570046_172570172_172570662_172570731_172573890_172573999_172575517_172575624_172577538_172577560_172577763_172577820_172578297_172578390_172579201_172579268_172588759_172589927_172590983_172591072_172600063_172600169_172602063_172602219_172602695_172602788_172608746_172608803_172609815
transcript_129066.known	chr7	-	1649	6	FSM	ENSG00000122678.17	ENST00000492605.5	1649	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.0272558436134	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGGAAGGAATGAATTCG	-44081250	True	NA	NA	False	NA	NA	NA	44082478	44075718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44076630_44078755_44078812_44079570_44079742_44079860_44079960_44080732_44080917_44082250
transcript_129076.known	chr7	-	1659	11	FSM	ENSG00000106628.12	ENST00000452185.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_10	500.176968682086	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAAAAAGTGGTTTTGAC	-44106362	True	NA	-33	True	GGGGCT	-11	NA	44123530	44114784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122283_44123510
transcript_12908.nic	chr1	+	1984	3	ISM	ENSG00000094975.14	ENST00000616058.4	5495	22	5	57078	5	2601	5prime_fragment	FALSE	canonical	3	137	junction_2	23	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGTAAAGTATCTCATTA	172529896	True	NA	NA	False	NA	NA	NA	172533122	172554753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_172533498_172551511_172551627_172553259
transcript_129085.known	chr7	-	1609	11	FSM	ENSG00000106628.12	ENST00000610533.6	1609	11	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_10	251.695629679977	1952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGGCACTCTGGCTAT	-44106380	True	NA	1	True	AATAAA	-30	NA	44123548	44114679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44114946_44115294_44115397_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833_44122110_44123510
transcript_129086.known	chr7	-	1597	10	FSM	ENSG00000106628.12	ENST00000223361.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	534.150831798577	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGATGCGAGCCTTGAG	-44122184	False	NA	-18	True	AATAAA	-11	NA	44122196	44114698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44114946_44115294_44115355_44115765_44115894_44116114_44116273_44116429_44116511_44116816_44117016_44117132_44117248_44117618_44117743_44117942_44118065_44121833
transcript_12909.known	chr1	+	756	2	FSM	ENSG00000094975.14	ENST00000608566.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGAAGTAATTTATA	172530156	False	NA	NA	False	NA	NA	NA	172533382	172552152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_172533498_172551511
transcript_129091.known	chr7	-	612	7	FSM	ENSG00000106631.8	ENST00000223364.7	612	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.91070819942883	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTGTGGTGTCTTGTCTG	-44141087	False	245	2	True	AATAAA	-20	NA	44141332	44138863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960_44141075_44141302
transcript_129098.known	chr7	-	791	6	FSM	ENSG00000106631.8	ENST00000458240.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.57681974534503	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTGCTGTGGTGTCTTGTC	-44141040	False	NA	0	True	AATAAA	-18	NA	44141285	44138865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140788_44140960
transcript_129099.known	chr7	-	646	6	FSM	ENSG00000106631.8	ENST00000457314.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	2.57681974534503	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	-44140829	False	NA	-3	True	AATAAA	-15	NA	44141074	44138868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139570_44139781_44139861_44140322_44140428_44140711_44140857_44140960
transcript_129100.known	chr7	-	634	6	FSM	ENSG00000106631.8	ENST00000434895.5	634	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.72021504754765	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAATTGCTGTGGTGTCTT	-44140791	False	NA	-3	True	AATAAA	-15	NA	44141036	44138868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44139023_44139520_44139665_44139781_44139861_44140322_44140428_44140711_44140788_44140960
transcript_129101.nic	chr7	-	1473	3	ISM	ENSG00000106633.18	ENST00000672743.1	846	4	-202	503	3	0	5prime_fragment	FALSE	canonical	2	6	junction_2	26.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	-44145896	True	NA	-4	True	ATTAAA	-19	NA	44146141	44144274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_44145281_44145496_44145731_44145908
transcript_129102.known	chr7	-	1311	3	FSM	ENSG00000106633.18	ENST00000336642.9	1311	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGTCCACTGTTCT	-44145899	True	NA	-4	True	ATTAAA	-19	NA	44146144	44144274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44145281_44145496_44145731_44146073
transcript_129103.nnic	chr7	+	403	2	Antisense	novelGene_ENSG00000106633.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAATGCTTGGGTGTTTGG	44194254	True	NA	NA	False	AATACA	-19	NA	44194274	44197983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_44194339_44197644
transcript_129105.nnic	chr7	+	654	2	Antisense	novelGene_ENSG00000106633.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTATAGCAGCATGATTT	44194254	True	NA	NA	False	AATAAA	-17	NA	44194274	44198234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_44194339_44197644
transcript_129107.known	chr7	-	1641	2	FSM	ENSG00000106633.18	ENST00000459642.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGTCCACTGTTCTTT	-44145884	True	NA	-2	True	ATTAAA	-21	NA	44146129	44144272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44145281_44145496
transcript_129109.known	chr7	+	1085	8	FSM	ENSG00000106636.9	ENST00000677090.1	1085	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_6	178.822338010184	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGGAGGTCGGAGCCAGC	44189579	True	NA	71	True	NA	NA	NA	44201011	44212595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44211553_44211605_44212246
transcript_129110.known	chr7	+	2737	7	FSM	ENSG00000106636.9	ENST00000677436.1	2737	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	150.04628915401	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTCTTGAAATTTCACA	44189550	True	NA	13	True	NA	NA	NA	44200982	44214276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44201240_44204574_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44211022_44211125_44212246
transcript_129113.known	chr7	+	1270	6	FSM	ENSG00000106636.9	ENST00000496112.5	1270	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	166.334121574619	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGGCTTCCCGCAGAGG	44189535	True	NA	NA	False	NA	NA	NA	44200967	44212889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44201240_44204567_44204651_44206384_44206486_44207387_44207493_44208132_44208199_44212246
transcript_129116.known	chr7	-	8036	6	FSM	ENSG00000015676.18	ENST00000355451.8	8036	6	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_2	14.4416065588286	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGTTGCTTTTCT	-44487835	True	NA	-8	True	TATAAA	-7	NA	44490658	44379118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44386122_44392296_44392486_44404439_44404584_44427570_44427704_44484967_44485285_44490408
transcript_129121.known	chr7	+	408	1	FSM	ENSG00000146677.7	ENST00000487895.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3726	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTCGTGTGCACGTTTT	44467712	False	NA	NA	False	AAGAAA	-9	NA	44467896	44468304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44467900_44468300
transcript_129126.known	chr7	-	1853	14	FSM	ENSG00000136271.11	ENST00000446987.5	1853	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_10	132.364656788978	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGCCTCCAGCATATG	-44573842	False	11171	-20	True	AATAAA	-17	NA	44573895	44565803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44566080_44566447_44566525_44568117_44568224_44568902_44568993_44569129_44569204_44569808_44569904_44570014_44570129_44570757_44570878_44571491_44571737_44572346_44572438_44572562_44572745_44572889_44573051_44573582_44573745_44573835
transcript_129129.nnic	chr7	-	1135	5	Fusion	ENSG00000158604.15_ENSG00000136271.11	novel	1755	4	NA	NA	-67	-1936	multi-exon	FALSE	canonical	0	0	junction_1	193.001295332441	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGTCCTCACCTGTAT	-44582301	False	NA	NA	False	AAAAAG	-15	NA	44582354	44574585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_44575039_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_129130.nnic	chr7	-	930	5	NNC	ENSG00000158604.15	novel	1755	4	NA	NA	8	2404	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	193.001295332441	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGGTTGAGGGGACAC	-44571108	True	NA	NA	False	AAAAAG	-10	NA	44582279	44575489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_44575666_44580945_44581240_44581448_44581575_44581722_44581824_44582046
transcript_129134.known	chr7	-	2294	5	FSM	ENSG00000158604.15	ENST00000457408.7	2294	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.001295332441	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-44571060	True	NA	NA	False	ATTAAA	-23	NA	44582231	44577893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44579629_44581092_44581240_44581448_44581575_44581722_44581824_44582046
transcript_129139.known	chr7	-	2203	4	FSM	ENSG00000158604.15	ENST00000289577.9	2203	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	184.287818371156	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTCCTTTTGTTATTT	-44582234	False	NA	NA	False	ATTAAA	-23	NA	44582287	44577893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44579629_44581448_44581575_44581722_44581824_44582046
transcript_129143.known	chr7	-	545	4	FSM	ENSG00000158604.15	ENST00000444131.2	545	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	209.978305757735	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGCATATCTCCTTGT	-44571070	True	NA	NA	False	NA	NA	NA	44582241	44581092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44581240_44581448_44581575_44581722_44581807_44582053
transcript_129145.known	chr7	+	1158	1	FSM	ENSG00000287574.1	ENST00000658337.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTCAGTGTGTGTCTCTA	44582450	True	NA	NA	False	ATTAAA	-36	NA	44582518	44583676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44582500_44583700
transcript_129146.known	chr7	+	4193	23	FSM	ENSG00000105953.16	ENST00000222673.6	4193	23	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	36.4868367524282	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATGTCTGCTGTGTCTTT	44599240	True	NA	10	True	CATAAA	-17	NA	44606626	44709066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969_44676150_44681719_44681849_44693824_44694005_44694423_44694577_44696024_44696128_44696428_44696558_44696913_44697065_44697369_44697498_44697603_44697783_44698191_44698264_44700140_44700270_44701542_44701616_44707224_44707389_44707581_44707737_44707878
transcript_129149.known	chr7	+	1744	9	FSM	ENSG00000105953.16	ENST00000443864.6	1744	9	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	40.2336923485777	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTATGTGTGTGTGTGTG	44599201	True	NA	3	True	AATAAA	-24	NA	44606587	44676594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44606654_44624316_44624566_44645326_44645519_44647656_44647760_44666735_44666852_44673786_44673942_44674410_44674558_44675177_44675269_44675969
transcript_129151.nnic	chr7	+	699	3	NNC	ENSG00000105953.16	novel	789	6	NA	NA	-5	-41773	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	211	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGATGTAAGTCATGTC	44599180	True	NA	NA	False	NA	NA	NA	44606566	44625078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_44606654_44624316_44624566_44624715
transcript_129153.nnic	chr7	+	958	3	NNC	ENSG00000105953.16	novel	789	6	NA	NA	-3	-41773	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_2	0.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGATGTAAGTCATGTC	44599182	True	NA	NA	False	NA	NA	NA	44606568	44625078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_44606654_44618823_44618935_44624316
transcript_129155.nic	chr7	+	849	2	ISM	ENSG00000105953.16	ENST00000443864.6	1744	9	-21	51516	-5	-41773	5prime_fragment	FALSE	canonical	3	422	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGATGTAAGTCATGTC	44599180	True	NA	NA	False	NA	NA	NA	44606566	44625078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_44606654_44624316
transcript_129165.known	chr7	+	2337	6	FSM	ENSG00000196262.15	ENST00000677107.1	2337	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8452.14267745168	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCCTAGTATTTCTTATT	44515098	True	NA	28	True	AATAAA	-19	NA	44796680	44803115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44797519_44797622_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_129206.known	chr7	+	446	2	FSM	ENSG00000196262.15	ENST00000620047.5	446	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	4105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	44515110	True	NA	3	True	AATAAA	-17	NA	44796692	44801631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44801286
transcript_129207.known	chr7	+	2237	5	FSM	ENSG00000196262.15	ENST00000468812.6	2237	5	0	0	0	0	multi-exon	FALSE	canonical	3	17102	junction_2	776.443816383388	82011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTAGTATTTCTTATTCC	44515098	True	NA	30	True	AATAAA	-21	NA	44796680	44803117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_129208.known	chr7	+	818	6	FSM	ENSG00000196262.15	ENST00000355968.10	818	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	8349.59779630133	3850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGTTTGAGTTAAGAGT	44515098	True	NA	3	True	AATAAA	-17	NA	44796680	44801631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44798747_44798815_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_129209.known	chr7	+	907	6	FSM	ENSG00000196262.15	ENST00000489459.5	907	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	8361.43465201995	3009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTCGTTTGAGTTAAGAG	44515098	True	NA	2	True	AATAAA	-16	NA	44796680	44801630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44798747_44798905_44799246_44799278_44799391_44799481_44799701_44799875_44801286
transcript_129210.known	chr7	+	863	6	FSM	ENSG00000196262.15	ENST00000415933.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8744.70467425859	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTGTCCTCGTTTGAGT	44515099	True	NA	-4	True	AATAAA	-10	NA	44796681	44801624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44796794_44799246_44799278_44799391_44799481_44799701_44799875_44800423_44800544_44801286
transcript_129212.known	chr7	-	687	4	FSM	ENSG00000105968.19	ENST00000350771.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	1390.98941604728	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	-44828450	True	NA	-8	True	GATAAA	-20	NA	44848076	44834227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44847968
transcript_129219.known	chr7	-	3026	5	FSM	ENSG00000105968.19	ENST00000308153.9	3026	5	0	0	0	0	multi-exon	FALSE	canonical	3	2506	junction_4	258.780191475314	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTGTTCTGTTTTGC	-44828461	True	NA	-2	True	TATAAA	-18	NA	44848087	44831977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44835528_44835659_44840898_44841013_44843276_44843355_44847968
transcript_129220.known	chr7	-	596	4	FSM	ENSG00000105968.19	ENST00000349299.7	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	1281.088686322	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTCAAAACTGTTCTG	-44828395	True	NA	-8	True	GATAAA	-20	NA	44848021	44834227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44835528_44835659_44843276_44843355_44847968
transcript_129221.known	chr7	-	628	4	FSM	ENSG00000105968.19	ENST00000381124.9	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	1126.25761805291	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAATTAATTTGTCTCA	-44828454	True	NA	-19	True	GATAAA	-9	NA	44848080	44834238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44834563_44840898_44841013_44843276_44843355_44847968
transcript_129223.nnic	chr7	+	577	3	NNC	ENSG00000234183.1	novel	281	2	NA	NA	16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCTCCAGCGATCGTT	44848188	True	NA	NA	False	ATTAAA	-18	NA	44848431	44849565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_44848522_44848852_44849233_44849458
transcript_129224.nnic	chr7	+	197	2	NNC	ENSG00000234183.1	novel	188	2	NA	NA	15	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCTCTCCAGCGATCGT	44848187	True	NA	NA	False	ATTAAA	-17	NA	44848430	44849564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_44848522_44849458
transcript_129225.known	chr7	+	188	2	FSM	ENSG00000234183.1	ENST00000443162.1	188	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTCCAGCGATCGTTTTT	44848172	True	NA	NA	False	ATTAAA	-21	NA	44848415	44849568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44848494_44849458
transcript_129230.known	chr7	-	710	4	FSM	ENSG00000232956.10	ENST00000580458.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	218.183918340061	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATATGTGATTTAGTCTT	-44980738	True	NA	-14	True	AATAAA	-9	NA	44986650	44983033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986524
transcript_129232.known	chr7	-	509	3	FSM	ENSG00000232956.10	ENST00000438705.3	509	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	247	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGTATCTCCTGAATG	-44980658	False	NA	-65	True	NA	NA	NA	44986570	44983084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44986524
transcript_129233.known	chr7	-	1123	4	FSM	ENSG00000232956.10	ENST00000667823.2	1124	4	0	1	0	-1	multi-exon	FALSE	canonical	3	342	junction_2	76.4475128583149	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980756	True	NA	-6	True	AATAAA	-17	NA	44986668	44983025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984427_44986020_44986098_44986524
transcript_129234.known	chr7	-	982	5	FSM	ENSG00000232956.10	ENST00000578968.6	986	5	0	4	0	0	multi-exon	FALSE	canonical	3	342	junction_3	67.2806621548867	2865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	NA	False	NA	-3	True	AATAAA	-20	NA	44986834	44983022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44986020_44986098_44986524
transcript_129235.known	chr7	-	1346	4	FSM	ENSG00000232956.10	ENST00000668580.1	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_2	69.4422221866655	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-44980787	True	NA	-3	True	AATAAA	-20	NA	44986699	44983022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44984047_44984356_44984427_44986020_44986098_44986524
transcript_129236.known	chr7	-	731	4	FSM	ENSG00000232956.10	ENST00000579383.6	732	4	0	1	0	-1	multi-exon	FALSE	canonical	3	39	junction_2	219.077358229665	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980744	True	NA	-6	True	AATAAA	-17	NA	44986656	44983025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44986020_44986098_44986524
transcript_129237.known	chr7	-	953	5	FSM	ENSG00000232956.10	ENST00000585030.6	956	5	0	3	0	-1	multi-exon	FALSE	canonical	3	34	junction_3	194.497268618354	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTAGTCTTGCCTGTTT	-44980757	True	NA	-6	True	AATAAA	-17	NA	44986669	44983025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821_44984047_44984356_44984427_44985881_44986098_44986524
transcript_129238.known	chr7	-	3116	2	FSM	ENSG00000232956.10	ENST00000577700.5	3116	2	0	0	0	0	multi-exon	FALSE	canonical	3	495	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTGCCTGTTTTTT	-44980725	True	NA	-3	True	AATAAA	-20	NA	44986637	44983022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44983323_44983821
transcript_129239.known	chr7	-	1626	3	FSM	ENSG00000232956.10	ENST00000582727.3	1637	3	6	5	-5	-3	multi-exon	FALSE	canonical	3	342	junction_1	85	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTTAGTCTTGCCTGT	-44980762	True	NA	-8	True	AATAAA	-15	NA	44986674	44983027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44984427_44986020_44986098_44986524
transcript_129240.known	chr7	-	3228	2	FSM	ENSG00000232956.10	ENST00000667119.1	3228	2	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTTAAATATGTGATTTA	-44980781	True	NA	-19	True	AATAAA	-4	NA	44986693	44983038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_44986098_44986524
transcript_129243.known	chr7	+	1983	10	FSM	ENSG00000136280.17	ENST00000461377.5	1983	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	105.388288524032	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGGCTGGGCCCTTGGACG	NA	False	NA	-73	True	NA	NA	NA	44999474	45076352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_44999858_45038252_45038427_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_129246.nnic	chr7	+	1642	9	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	268	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	131.203980027284	701	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	44999257	True	NA	28	True	AAAAAG	-28	NA	44999742	45076453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_44999858_45063917_45064002_45064462_45064647_45068442_45068580_45069825_45069962_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_12925.known	chr1	-	1087	2	FSM	ENSG00000203739.5	ENST00000661092.1	1087	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACTGGAGCCTGTAGCTT	NA	False	NA	NA	False	AATAAA	-23	NA	173420501	173417792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173418623_173420244
transcript_129253.nnic	chr7	+	1303	6	NIC	ENSG00000136280.17	novel	1983	10	NA	NA	240	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	186.456429226777	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGTTGCCAAGCATGT	NA	False	NA	28	True	AAAAAG	-28	NA	44999714	45076453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_44999858_45038252_45038427_45072725_45072784_45073459_45073572_45074269_45074409_45075776
transcript_129259.nnic	chr7	-	1029	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	24.3246274380513	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-3	True	AATAAA	-21	NA	45000047	44988765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_12926.known	chr1	+	1690	5	FSM	ENSG00000117592.9	ENST00000340385.6	1690	5	0	0	0	0	multi-exon	FALSE	canonical	3	3684	junction_2	175.869269629461	14997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTCATATTTTGAA	173445783	True	NA	28	True	AATAAA	-28	NA	173477334	173488815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173477493_173481325_173481483_173485360_173485508_173486254_173486402_173487734
transcript_129262.nnic	chr7	-	1059	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	27.3404462289846	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-3	True	AATAAA	-21	NA	45000047	44988765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989048_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_129265.nnic	chr7	-	1055	5	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	28.0401497856199	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCACAGTCTTAAAAGAAAT	NA	False	NA	NA	False	AATAAA	-24	NA	45000047	44992049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44992328_44992612_44992850_44995028_44995145_44999279_44999374_44999717
transcript_129268.nnic	chr7	-	984	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	27.956315128349	92	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-3	True	AATAAA	-21	NA	45000096	44988765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989018_44992612_44992850_44995028_44995145_44999717
transcript_12927.known	chr1	-	2660	6	FSM	ENSG00000183831.7	ENST00000333279.3	2660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1.35646599662505	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAATAATAAAAACA	-173669623	True	NA	NA	False	NA	NA	NA	173669851	173608335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173610216_173624786_173624926_173627064_173627160_173646845_173647014_173659090_173659434_173669816
transcript_129271.nnic	chr7	-	959	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	31.8991466273873	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTCTGCATGAATT	NA	False	NA	-3	True	AATAAA	-21	NA	45000041	44988765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44989048_44992612_44992850_44995028_44995145_44999717
transcript_129273.nnic	chr7	-	906	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	32.3419232575925	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGCTGGCTCTGCATGAA	NA	False	NA	-5	True	AATAAA	-19	NA	45000096	44988767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44988942_44992612_44992850_44995028_44995145_44999717
transcript_129275.nnic	chr7	-	927	4	Antisense	novelGene_ENSG00000136280.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	32.7854981491648	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCACAGTCTTAAAAGAAAT	-44999386	True	NA	NA	False	AATAAA	-24	NA	45000013	44992049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_44992328_44992612_44992850_44995028_44995145_44999717
transcript_129284.known	chr7	-	2190	11	FSM	ENSG00000136270.14	ENST00000494076.5	2190	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	240.357150923371	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCACTTGTCTGTCTGCTTT	-45098353	True	NA	-4	True	NA	NA	NA	45111706	45100100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109244_45111642
transcript_129285.known	chr7	-	2226	11	FSM	ENSG00000136270.14	ENST00000258770.8	2226	11	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_10	93.6515349580561	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098344	True	NA	-3	True	NA	NA	NA	45111697	45100099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111642
transcript_129286.nic	chr7	-	2527	11	NIC	ENSG00000136270.14	novel	2226	11	NA	NA	2	0	intron_retention	FALSE	canonical	3	139	junction_10	204.18481824073	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-3	True	NA	NA	NA	45112019	45100099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45104098_45104257_45104537_45104710_45105440_45105765_45108826_45109288_45111663
transcript_129313.known	chr7	-	1917	9	FSM	ENSG00000136270.14	ENST00000361278.7	1917	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	258.020832492262	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	-45098365	True	NA	-3	True	NA	NA	NA	45111718	45100099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111642
transcript_129314.known	chr7	-	2225	9	FSM	ENSG00000136270.14	ENST00000395655.8	2225	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	315.766502933734	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTGTCTGTCTGCTTTG	NA	False	NA	-3	True	NA	NA	NA	45112047	45100099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45100427_45101257_45101373_45101502_45101615_45101824_45102071_45102346_45102492_45103332_45103444_45105440_45105765_45108826_45109288_45111663
transcript_12932.known	chr1	-	1824	2	FSM	ENSG00000183831.7	ENST00000367712.2	1824	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAGAAGAAAGAAAATA	-173669604	True	NA	NA	False	NA	NA	NA	173669832	173657625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173659434_173669816
transcript_129333.known	chr7	+	1323	3	FSM	ENSG00000122679.8	ENST00000242249.8	1323	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.5	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGTTTTGTTTCATGT	45157655	True	NA	4	True	AGTAAA	-19	NA	45157790	45184250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_45157887_45177308_45177442_45183156
transcript_129334.known	chr7	+	1647	9	FSM	ENSG00000164742.16	ENST00000621543.1	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	9.9968745115661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGGCAGTTTGGTTGCT	45574389	False	NA	2	True	AATAAA	-15	NA	45574884	45664671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_45575183_45592758_45592909_45610378_45610498_45622631_45622744_45648669_45648798_45657726_45657886_45660041_45660184_45662058_45662215_45664288
transcript_129335.known	chr7	+	12657	20	FSM	ENSG00000164742.16	ENST00000297323.12	12657	20	0	0	0	0	multi-exon	TRUE	canonical	2	21	junction_16	8.78584860637104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGGCCATTTCAGTTG	45573872	True	NA	NA	False	AATAAA	-23	NA	45574367	45723116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_45575183_45592758_45592909_45610378_45610498_45622631_45622744_45648669_45648798_45657726_45657886_45660041_45660184_45662058_45662215_45677868_45678064_45678165_45678264_45679708_45679794_45684978_45685069_45685961_45686216_45686546_45686674_45703375_45703493_45703599_45703747_45704517_45704617_45708349_45708465_45710527_45710653_45713692
transcript_12934.known	chr1	+	3414	12	FSM	ENSG00000076321.11	ENST00000209884.5	3414	12	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	8.19191296441368	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGCTAATGCTTTTTAT	173713404	True	NA	NA	False	AATAAA	-24	NA	173714980	173786692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173715079_173716002_173716067_173733712_173734287_173751763_173751923_173753212_173753308_173755922_173756039_173756975_173757160_173766145_173766290_173774304_173774439_173775633_173775843_173782123_173782231_173785162
transcript_129340.nic	chr7	-	1753	13	FSM	ENSG00000214765.9	ENST00000338231.8	1716	13	-41	4	-17	0	multi-exon	FALSE	canonical	2	27	junction_1	55.4007495938056	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTTATCATTGCATCCT	NA	False	NA	NA	False	AATAAA	-23	NA	45769059	45723787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724024_45724352_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129348.nic	chr7	-	1749	12	FSM	ENSG00000214765.9	ENST00000690171.1	1731	12	-18	0	-3	0	multi-exon	FALSE	canonical	2	27	junction_2	49.9818148748304	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCCTCTCTCTTTC	-45766747	True	NA	-27	True	AATAAA	-14	NA	45768988	45724049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724481_45726183_45726237_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129349.nnic	chr7	-	1995	12	FSM	ENSG00000214765.9	ENST00000686032.1	1978	12	-19	2	-3	0	multi-exon	FALSE	canonical	2	9	junction_3	58.2440008615792	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	-45766753	True	NA	-1	True	NA	NA	NA	45768994	45726332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45726862_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129350.nnic	chr7	-	1849	12	NNC	ENSG00000214765.9	novel	1907	12	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	59.6155728725777	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	-45766738	True	NA	-1	True	NA	NA	NA	45768979	45726332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_45726862_45728177_45728314_45735606_45735671_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129355.nnic	chr7	-	1565	11	FSM	ENSG00000214765.9	ENST00000689783.1	1492	11	-80	7	-17	3	multi-exon	FALSE	canonical	2	4	junction_1	47.1978813083808	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAAATGAACTTATCATT	NA	False	NA	NA	False	AATAAA	-16	NA	45769059	45723794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724024_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129357.nnic	chr7	-	1865	11	FSM	ENSG00000214765.9	ENST00000686085.1	1822	11	-45	2	-17	0	multi-exon	FALSE	canonical	3	64	junction_1	31.1839702411351	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	-1	True	NA	NA	NA	45769059	45726332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45726862_45728177_45728314_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129367.nic	chr7	-	838	6	ISM	ENSG00000214765.9	ENST00000686398.1	1600	10	49	20039	-3	9340	5prime_fragment	FALSE	canonical	3	123	junction_1	20.0539272961682	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTTAAAAAGATAAAGGT	-45766747	True	NA	NA	False	AATATA	-38	NA	45768988	45748643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129371.known	chr7	-	1920	13	FSM	ENSG00000214765.9	ENST00000428414.5	1920	13	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	64.3846945235348	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGCCCCCTCTCTCTTTC	-45766723	True	NA	-27	True	AATAAA	-14	NA	45768964	45724049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_45724481_45726183_45726237_45728177_45728314_45728831_45729027_45736786_45736911_45744996_45745049_45747214_45747312_45748625_45748715_45751528_45751647_45756908_45756993_45758042_45758178_45759073_45759175_45768659
transcript_129373.known	chr7	-	1304	9	FSM	ENSG00000136273.13	ENST00000458191.5	1304	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	40.0731752547761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGCATTGACCTCCTTGG	-47976352	True	NA	NA	False	NA	NA	NA	47979553	47964319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47964633_47965299_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_129374.known	chr7	-	1125	8	FSM	ENSG00000136273.13	ENST00000432325.5	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	36.8969884286244	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTCTGTTTTGCT	-47976352	True	NA	25	True	GATAAA	-15	NA	47979553	47965165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979409
transcript_129378.known	chr7	-	3007	8	FSM	ENSG00000136273.13	ENST00000258774.10	3007	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	12.0576844834338	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGGTGTCTGTTTCTG	-47976414	True	NA	-1	True	AAGAAA	-18	NA	47979615	47963287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47965439_47967805_47967926_47969218_47969319_47975612_47975688_47976729_47976838_47978416_47978594_47978688_47978817_47979467
transcript_129379.known	chr7	-	548	3	FSM	ENSG00000136273.13	ENST00000468868.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	19	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCCTCATTTTAAAATT	-47976352	True	NA	45	True	TTTAAA	-43	NA	47979553	47978259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_47978594_47978688_47978817_47979467
transcript_129382.known	chr7	+	2102	9	FSM	ENSG00000164746.14	ENST00000348904.4	2102	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.48746859276655	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGAAGTTTGTTTTTTCC	48035484	True	NA	NA	False	AATAAA	-18	NA	48035542	48061297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48035631_48036207_48036364_48041333_48041520_48043480_48043590_48046459_48046617_48049879_48049978_48052699_48052924_48054594_48054607_48060225
transcript_129384.nic	chr7	+	1337	9	NIC	ENSG00000183696.14	novel	918	7	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	81.8458917722814	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089477	False	NA	9	True	ATTAAA	-15	NA	48089492	48108419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_129393.known	chr7	+	861	7	FSM	ENSG00000183696.14	ENST00000482015.5	861	7	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	116.48414293609	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089328	False	NA	9	True	ATTAAA	-15	NA	48089343	48108419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090249_48090365_48094762_48094828_48101823_48101871_48106872_48107083_48107360_48107508_48108217
transcript_129396.known	chr7	+	782	6	FSM	ENSG00000183696.14	ENST00000417464.6	782	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	96.0104161015877	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089360	False	NA	9	True	ATTAAA	-15	NA	48089375	48108419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090249_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_129397.nic	chr7	+	945	6	NIC	ENSG00000183696.14	novel	918	7	NA	NA	117	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_1	76.9285382676676	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48089477	False	NA	9	True	ATTAAA	-15	NA	48089492	48108419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_48089637_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_129402.known	chr7	+	918	7	FSM	ENSG00000183696.14	ENST00000436673.5	918	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	70.4769465853906	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTGCAGAGGGGCCTC	48086272	True	NA	NA	False	NA	NA	NA	48089264	48103413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48089508_48089637_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296
transcript_129403.known	chr7	+	1664	9	FSM	ENSG00000183696.14	ENST00000395564.9	1664	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	75.5211063213457	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCAATGAGAGATGACTG	48086272	True	NA	NA	False	ATTAAA	-17	NA	48089264	48108736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48099669_48099788_48101823_48101983_48103296_48103412_48106872_48107083_48107360_48107508_48108217
transcript_129404.known	chr7	+	955	6	FSM	ENSG00000183696.14	ENST00000395560.7	955	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	49.366385324429	830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGTTGTGTGGACTTT	48086272	True	NA	9	True	ATTAAA	-15	NA	48089264	48108419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_48089419_48090187_48090365_48094762_48094828_48106872_48107083_48107360_48107508_48108217
transcript_129407.known	chr7	+	11322	4	FSM	ENSG00000188730.5	ENST00000340652.5	11322	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	7.11805216802087	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTGCACTTCCAGGTAGA	49773445	True	NA	NA	False	AATAAA	-17	NA	49773637	49921950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_49774114_49775332_49776132_49802710_49802841_49912033
transcript_129411.known	chr7	-	3485	4	FSM	ENSG00000132436.12	ENST00000395556.6	3485	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	6.59966329107444	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGCTTGCATTCTAA	-50449510	True	NA	-6	True	ATTAAA	-19	NA	50450350	50444132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_50447298_50448180_50448290_50449562_50449724_50450300
transcript_129412.known	chr7	-	3368	3	FSM	ENSG00000132436.12	ENST00000615084.4	3368	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTGCATTCTAAATTG	-50449550	True	NA	-2	True	ATTAAA	-23	NA	50450390	50444128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_50447298_50448180_50448290_50450300
transcript_129417.known	chr7	+	3401	4	FSM	ENSG00000170419.11	ENST00000302287.7	3401	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATGCTTCATTTATTCAT	54542307	False	NA	NA	False	AATAAA	-14	NA	54542324	54552531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_54542810_54544621_54544789_54546946_54546998_54549833
transcript_129418.known	chr7	+	865	3	FSM	ENSG00000170419.11	ENST00000495904.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATAAAATTACATATTTT	54542308	False	NA	NA	False	NA	NA	NA	54542325	54547160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_54542810_54544621_54544789_54546946
transcript_12942.known	chr1	+	450	4	FSM	ENSG00000076321.11	ENST00000479505.5	450	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	19.8158185969358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACAAGCACCCTCGACAA	173713364	True	NA	NA	False	NA	NA	NA	173714940	173733828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173715079_173715522_173715655_173716002_173716067_173733712
transcript_129423.known	chr7	+	377	1	FSM	ENSG00000232612.1	ENST00000431058.1	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGATCGTCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	54656357	54656734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_54656400_54656700
transcript_129431.known	chr7	-	512	4	FSM	ENSG00000132432.14	ENST00000450622.1	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	2267.13784318466	1637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGAATATCTCTTTTTT	-54739443	True	NA	26	True	ATTAAA	-13	NA	54759182	54752256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759037
transcript_129438.known	chr7	-	425	4	FSM	ENSG00000132432.14	ENST00000352861.9	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	3127	junction_3	868.454949896654	38804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	-54739472	True	NA	30	True	ATTAAA	-17	NA	54759211	54752252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157
transcript_129439.known	chr7	-	732	5	FSM	ENSG00000132432.14	ENST00000415949.5	732	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2029.01269094109	19131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATATCTCTTTTTTCTGT	NA	False	NA	30	True	ATTAAA	-17	NA	54759974	54752252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_54752421_54755778_54755882_54757494_54757595_54759157_54759335_54759790
transcript_12944.nic	chr1	+	934	3	ISM	ENSG00000076321.11	ENST00000209884.5	3414	12	-57	52265	-17	-86	5prime_fragment	FALSE	canonical	3	31	junction_1	12.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTTTTATTTTAGAGG	173713347	True	NA	NA	False	AATAAA	-22	NA	173714923	173734427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_173715079_173716002_173716067_173733712
transcript_129441.known	chr7	+	4459	9	FSM	ENSG00000132434.10	ENST00000254770.3	4459	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	11.7340317027013	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCGTCATTCGTTTTC	55365278	True	NA	9	True	AGTAAA	-25	NA	55365336	55433737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55366230_55391792_55391911_55398422_55398631_55399956_55400105_55401173_55401321_55411906_55412090_55425253_55425431_55428374_55428448_55431225
transcript_129444.known	chr7	-	2939	5	FSM	ENSG00000154978.13	ENST00000285279.10	2939	5	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	38.1215162342738	740	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGATTGTTTTGTT	-55568092	True	NA	-9	True	AATAAA	-15	NA	55572502	55470612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_55473046_55492281_55492419_55497612_55497691_55521071_55521131_55572270
transcript_129454.known	chr7	+	718	3	FSM	ENSG00000239789.6	ENST00000443449.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	392	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGAAGCGGGAGTGGAAG	55937074	False	NA	-71	True	NA	NA	NA	55951962	55955172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55952277_55953178_55953319_55954908
transcript_129464.known	chr7	+	1786	3	FSM	ENSG00000239789.6	ENST00000285298.9	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	182	6589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACTTTTCTTACATCCT	55936988	True	NA	14	True	AATAAA	-15	NA	55951876	55956500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_55951931_55953178_55953319_55954908
transcript_129479.nnic	chr7	-	1666	8	NNC	ENSG00000146733.14	novel	2178	8	NA	NA	-62	688	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	101.66190465038	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTATATAAACCATTTC	NA	False	NA	48	True	ATTAAA	-17	NA	56034234	56010362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_56010598_56011427_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_129486.known	chr7	-	1974	8	FSM	ENSG00000146733.14	ENST00000275605.8	1974	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	96.8459749145149	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGATTTGTGGAATTTTCAG	-56049656	True	NA	-20	True	AATAAA	-21	NA	56051444	56011063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034107_56051137
transcript_129487.known	chr7	-	2178	8	FSM	ENSG00000146733.14	ENST00000395471.7	2178	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	73.9495139419111	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	NA	False	NA	-24	True	AATAAA	-17	NA	56051604	56011067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960_56034155_56051137
transcript_129504.nic	chr7	-	1791	7	ISM	ENSG00000146733.14	ENST00000275605.8	1974	8	17210	4	-62	0	3prime_fragment	FALSE	canonical	3	259	junction_6	19.6504170156485	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACGGATTTGTGGAATTT	NA	False	NA	-24	True	AATAAA	-17	NA	56034234	56011067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_56011870_56015022_56015172_56017233_56017380_56019599_56019735_56021072_56021232_56031928_56032055_56033960
transcript_129531.known	chr7	+	2584	14	FSM	ENSG00000146731.11	ENST00000275603.9	2584	14	0	0	0	0	multi-exon	FALSE	canonical	3	2441	junction_3	270.128875663924	3140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTTGCAATGGT	56017721	True	NA	28	True	AATAAA	-18	NA	56051764	56063989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56051986_56052421_56052486_56054368_56054504_56055623_56055798_56056310_56056415_56057992_56058104_56058361_56058522_56058619_56058703_56059543_56059641_56060268_56060417_56060806_56060941_56061746_56061850_56062682_56062756_56063012
transcript_129532.known	chr7	+	765	4	FSM	ENSG00000146731.11	ENST00000482776.1	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	2595	junction_3	152.343909187951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAATTTTTTATTATTAT	56056277	False	NA	2	True	AATAAA	-11	NA	56056311	56059010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56056415_56057992_56058104_56058361_56058522_56058619
transcript_129536.known	chr7	+	1990	9	FSM	ENSG00000129103.19	ENST00000434526.8	1990	9	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_5	35.5940655165998	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTTGTGTCTTTGATCC	56056278	True	NA	29	True	AATAAA	-24	NA	56064285	56080670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_129541.known	chr7	+	1792	8	FSM	ENSG00000129103.19	ENST00000423763.5	1792	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	153.064745537732	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATAAAATCTCCTGCAA	56056293	True	NA	-3	True	NA	NA	NA	56064300	56080638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074173_56074219_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_129542.known	chr7	+	2006	8	FSM	ENSG00000129103.19	ENST00000651586.1	2006	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	148.268096944112	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056216	True	NA	28	True	AATAAA	-23	NA	56064223	56080669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_129544.known	chr7	+	913	8	FSM	ENSG00000129103.19	ENST00000452216.5	913	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	165.079819901693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCCCATCCCTCTG	56056257	True	NA	NA	False	NA	NA	NA	56064264	56079729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56072996_56073112_56074173_56074219_56074585_56074737_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_129548.known	chr7	+	1771	7	FSM	ENSG00000129103.19	ENST00000438133.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	165.689133285466	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATTTGTGTCTTTGATC	56056300	True	NA	28	True	AATAAA	-23	NA	56064307	56080669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_129553.known	chr7	+	1287	6	FSM	ENSG00000129103.19	ENST00000395435.7	1287	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	186.685189557179	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGCATTGCATTGTGGG	56056246	True	NA	NA	False	NA	NA	NA	56064253	56080187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996_56073112_56078101_56078187_56078363_56078509_56079527
transcript_129555.known	chr7	+	1683	6	FSM	ENSG00000129103.19	ENST00000436782.5	1683	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	188.606892769061	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGACATTTGTGTCTTT	56056269	True	NA	24	True	AATAAA	-19	NA	56064276	56080665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56076833_56076890_56078101_56078187_56078363_56078509_56079527
transcript_12956.known	chr1	-	688	12	FSM	ENSG00000234741.9	ENST00000454068.5	688	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	1102.45874719021	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAATCCATCTGGAGTGT	-173867804	False	NA	-47	True	AATAAA	-4	NA	173867815	173863910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867721
transcript_129561.known	chr7	+	1195	3	FSM	ENSG00000129103.19	ENST00000483327.5	1195	3	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	15.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTCTGATGGTGCCAC	56056293	True	NA	NA	False	NA	NA	NA	56064300	56073956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_56064379_56068481_56068639_56072996
transcript_129566.known	chr7	-	797	4	FSM	ENSG00000106153.13	ENST00000395422.4	797	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGGTTCATTTAGTCTA	NA	False	NA	-14	True	AATAAA	-16	NA	56106476	56101572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_56101862_56102866_56103012_56104225_56104476_56106363
transcript_129570.known	chr7	-	2993	4	FSM	ENSG00000173041.12	ENST00000309683.11	2993	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	1.69967317119759	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTATTGTGCATTCAATGA	-64561003	True	NA	-1	True	ATTAAA	-20	NA	64563071	64519877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64522501_64543706_64543803_64544305_64544433_64562924
transcript_129571.known	chr7	-	2159	4	FSM	ENSG00000173041.12	ENST00000447137.2	2159	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.2807651352991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGCCTCTGTTATTAAT	-64560973	True	NA	NA	False	NA	NA	NA	64563041	64524698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64526518_64543706_64543803_64544305_64544433_64562924
transcript_129573.known	chr7	-	769	3	FSM	ENSG00000173041.12	ENST00000476563.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	25.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTCTCAATCCTTAGTAA	-64560954	True	NA	NA	False	NA	NA	NA	64563022	64521925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64522501_64543706_64543803_64562924
transcript_129574.nnic	chr7	-	1021	3	NNC	ENSG00000173041.12	novel	2993	4	NA	NA	-31	-15499	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATACTTTTGCTTTTCTT	-64561038	True	NA	NA	False	AATAAA	-23	NA	64563106	64559844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_64560189_64560778_64561274_64562924
transcript_129577.known	chr7	+	475	1	FSM	ENSG00000224669.1	ENST00000414815.1	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAAATGGAACCCCTAAA	64580407	False	NA	NA	False	NA	NA	NA	64582732	64583207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64582700_64583200
transcript_12958.known	chr1	-	1007	12	FSM	ENSG00000234741.9	ENST00000451607.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	1105.66849006262	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTACAGCCTCAAACTTC	-173867718	False	NA	95	True	NA	NA	NA	173867729	173864033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867154
transcript_129583.nnic	chr7	+	661	3	FSM	ENSG00000286456.2	ENST00000686440.1	636	3	-32	7	-32	-7	multi-exon	FALSE	canonical	3	14	junction_2	32	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCACCAAGGCTATGTG	64572315	True	NA	11	True	AATAAA	-22	NA	64574640	64614827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64574849_64599658_64599783_64614498
transcript_129586.known	chr7	+	5174	5	FSM	ENSG00000196247.13	ENST00000344930.7	5174	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.2834820402676	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGATTATGCGTGAAC	64662318	True	NA	12	True	AATAAA	-19	NA	64666197	64711026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64666286_64679176_64679337_64691247_64691375_64691864_64691961_64706323
transcript_129587.known	chr7	+	5664	4	FSM	ENSG00000196247.13	ENST00000620827.6	5630	4	-29	-5	5	5	multi-exon	FALSE	canonical	3	60	junction_1	5.55777733351102	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTTTTCTTTGAACATG	64662224	True	NA	NA	False	AATAAA	-17	NA	64666103	64711582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64666286_64691247_64691375_64691864_64691961_64706323
transcript_129602.known	chr7	+	2574	4	FSM	ENSG00000197008.10	ENST00000437743.1	2574	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	6.84754619472471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAACTCAGCAT	64790100	True	NA	3	True	AATAAA	-17	NA	64794427	64833664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814058_64814148_64814917_64815045_64831450
transcript_129603.nnic	chr7	+	555	3	NNC	ENSG00000197008.10	novel	1066	3	NA	NA	5	-32296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCATATCTGACTTA	64790065	True	NA	7	True	CATAAA	-16	NA	64794392	64799507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_64794572_64795709_64795769_64799190
transcript_129604.nnic	chr7	+	617	3	NNC	ENSG00000197008.10	novel	1066	3	NA	NA	11	-32298	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTCATATCTGACT	64790071	True	NA	5	True	CATAAA	-14	NA	64794398	64799505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_64794572_64796979_64797109_64799190
transcript_129610.known	chr7	+	2308	2	FSM	ENSG00000197008.10	ENST00000430838.2	2308	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCATAAGGTTTTGTTT	64790162	True	NA	15	True	AATAAA	-29	NA	64794489	64833676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64831450
transcript_129614.nnic	chr7	+	496	2	NNC	ENSG00000197008.10	novel	2308	2	NA	NA	3	-32298	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTCATATCTGACT	64790063	True	NA	5	True	CATAAA	-14	NA	64794390	64799505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_64794572_64799190
transcript_129615.known	chr7	+	842	5	FSM	ENSG00000197008.10	ENST00000494380.5	842	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	24.8130510014387	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTAGAGAGAATTT	64790097	True	NA	55	True	CATAAA	-4	NA	64794424	64831803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64830939_64831077_64831450
transcript_129616.known	chr7	+	2679	4	FSM	ENSG00000197008.10	ENST00000359735.7	2679	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	29.1699998095456	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAAGGTTTTGTTTTAGTG	64790060	True	NA	20	True	AATAAA	-34	NA	64794387	64833681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64830939_64831077_64831450
transcript_129617.known	chr7	+	2579	4	FSM	ENSG00000197008.10	ENST00000307355.12	2579	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	20.9920619917784	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAAGGTTTTGTTTTAGT	64790100	True	NA	19	True	AATAAA	-33	NA	64794427	64833680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64794572_64814917_64815045_64815575_64815654_64831450
transcript_129620.known	chr7	+	3757	5	FSM	ENSG00000198039.12	ENST00000395375.3	3757	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	20.9821352583573	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGAGTCCTGAATATTT	64900531	True	NA	14	True	AATAAA	-31	NA	64903287	64930966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64903420_64917029_64917119_64917580_64917708_64918196_64918293_64927653
transcript_129621.known	chr7	+	1472	5	FSM	ENSG00000198039.12	ENST00000489672.5	1472	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.2171833058807	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTCTCTATGTGTT	64900496	True	NA	NA	False	ATTAAA	-13	NA	64903252	64924431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64903367_64917029_64917119_64917580_64917708_64918196_64918293_64923385
transcript_129627.nic	chr7	+	1259	4	NIC	ENSG00000198039.12	novel	3698	4	NA	NA	-36	-213	combination_of_known_junctions	TRUE	canonical	3	16	junction_3	31.689465477067	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTAAGACTCTTTTGAC	64900460	True	NA	NA	False	CATAAA	-18	NA	64903216	64924218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
transcript_129628.nic	chr7	+	1472	4	NIC	ENSG00000198039.12	novel	1472	5	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	31.689465477067	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGTTCTCTATGTGTT	64900460	True	NA	NA	False	ATTAAA	-13	NA	64903216	64924431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_64903420_64917580_64917708_64918196_64918293_64923385
transcript_129629.known	chr7	+	2000	4	FSM	ENSG00000198039.12	ENST00000476120.2	3698	4	-26	1724	-6	133	multi-exon	FALSE	canonical	3	46	junction_1	19.2006944318862	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTCAAAAGATCTTTC	64900490	True	NA	NA	False	AATAAA	-17	NA	64903246	64929257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64903420_64917580_64917708_64918196_64918293_64927653
transcript_129631.nic	chr7	-	748	2	ISM	ENSG00000189316.3	ENST00000340779.3	1062	3	578	0	578	0	intron_retention	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTAATTCTCACCATCA	NA	False	NA	NA	False	AATAAA	-34	NA	64889522	64888526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_64888818_64889065
transcript_129632.known	chr7	+	752	3	FSM	ENSG00000286342.2	ENST00000653683.2	933	3	98	83	28	-36	multi-exon	FALSE	canonical	3	7	junction_2	0.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAATATGTGGGTAAATC	64947812	False	NA	-78	True	NA	NA	NA	64947837	64950641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64947858_64949115_64949410_64950203
transcript_129633.nic	chr7	+	1349	3	FSM	ENSG00000286342.2	ENST00000690692.1	1023	3	-328	2	-151	0	multi-exon	TRUE	canonical	0	0	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	NA	False	NA	3	True	NA	NA	NA	64947419	64950722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_64947956_64949115_64949410_64950203
transcript_129641.known	chr7	-	3206	2	FSM	ENSG00000213462.5	ENST00000394323.3	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTCTCCGGCCTCCTG	-65004002	True	NA	-3	True	AATAAA	-19	NA	65006687	64990355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64993415_65006540
transcript_129642.known	chr7	-	1729	2	FSM	ENSG00000213462.5	ENST00000528878.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACCGTAAAATTTCCTT	-65004058	True	NA	NA	False	AATAAA	-34	NA	65006743	65003668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65005195_65006540
transcript_129643.known	chr7	-	1837	3	FSM	ENSG00000152926.16	ENST00000487644.1	1837	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	11	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATGTGGGTGTGTTATT	-65003999	True	NA	NA	False	AATAAA	-10	NA	65006684	64979922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_64981483_64981983_64982117_65006540
transcript_129644.known	chr7	-	358	2	FSM	ENSG00000213462.5	ENST00000535538.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGAGCACCAAGCTATG	-65003974	True	NA	-17	True	ATTAAA	-28	NA	65006659	65006083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65006323_65006540
transcript_129649.known	chr7	+	2238	11	FSM	ENSG00000234585.6	ENST00000426828.5	2238	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	14.3069912979634	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65037985	True	NA	NA	False	AATAAA	-18	NA	65038359	65074713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65038566_65064998_65065134_65066252_65066427_65066944_65067051_65068455_65068611_65068708_65068791_65069660_65069758_65070345_65070485_65070908_65071043_65073440_65073515_65073777
transcript_129657.nnic	chr7	+	802	3	FSM	ENSG00000282381.2	ENST00000685802.1	757	3	-45	0	-15	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCGAGTGTTTGGGGG	65268575	True	NA	NA	False	NA	NA	NA	65269343	65313902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65269539_65303528_65303803_65313569
transcript_129658.known	chr7	+	3165	4	FSM	ENSG00000146757.14	ENST00000328747.12	3165	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6144555520604	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTAGTGTATTCGATGAAG	65369069	True	NA	8	True	ATTAAA	-21	NA	65373854	65401136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65387901_65388029_65388805_65388902_65398340
transcript_129661.known	chr7	+	2957	3	FSM	ENSG00000146757.14	ENST00000450302.2	2957	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	46	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGATTGTGTGTGAACTT	65369095	True	NA	18	True	AATAAA	-19	NA	65373880	65401081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65388805_65388902_65398340
transcript_129662.known	chr7	+	2947	2	FSM	ENSG00000146757.14	ENST00000431504.1	2947	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATGCTAAGACTAGTGT	65369053	True	NA	-3	True	ATTAAA	-10	NA	65373838	65401125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65374001_65398340
transcript_129678.nic	chr7	+	1709	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	-12	552	-12	0	multi-exon	FALSE	canonical	3	44	junction_1	19.1874959283383	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAATGGTTTAATTTT	65749831	True	NA	NA	False	ATTAAA	-18	NA	65751024	65763673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_129679.nic	chr7	+	2258	11	FSM	ENSG00000228409.7	ENST00000686363.1	2249	11	-12	3	-12	0	multi-exon	FALSE	canonical	3	44	junction_1	19.1874959283383	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGGTCTTGCAATGGT	65749831	True	NA	NA	False	AATAAA	-18	NA	65751024	65764222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65761645_65761749_65762946_65763021_65763280
transcript_129685.known	chr7	+	1317	11	FSM	ENSG00000228409.7	ENST00000688478.1	2258	11	73	868	0	18	multi-exon	FALSE	canonical	3	9	junction_2	29.6033781856058	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	65749948	True	NA	NA	False	NA	NA	NA	65751141	65763354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65752163_65752311_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_129686.known	chr7	+	1170	10	FSM	ENSG00000228409.7	ENST00000688735.1	2135	10	94	871	0	18	multi-exon	FALSE	canonical	3	44	junction_1	19.2341003762575	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTCCTCTGTATCTGAGT	65749948	True	NA	NA	False	NA	NA	NA	65751141	65763354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65751279_65755779_65755953_65756468_65756575_65757982_65758138_65758235_65758318_65759174_65759272_65759859_65759999_65760423_65760557_65762946_65763021_65763280
transcript_129699.nic	chr7	+	862	3	ISM	ENSG00000228409.7	ENST00000690636.1	1243	7	-29	6770	-12	-6433	5prime_fragment	FALSE	canonical	3	44	junction_1	18.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTAATAAAGTGTGTTT	65749831	True	NA	NA	False	NA	NA	NA	65751024	65756903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_65751279_65755779_65755953_65756468
transcript_129701.known	chr7	+	5895	3	FSM	ENSG00000196715.7	ENST00000648179.1	5895	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	22	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTCTTTCATGGAGCT	65870444	True	NA	20	True	AATAAA	-20	NA	65873269	65959562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65873566_65948670_65948781_65954073
transcript_129704.known	chr7	+	1541	2	FSM	ENSG00000196715.7	ENST00000434382.2	1541	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTGACATGCTGCCCAGT	65870543	True	NA	NA	False	NA	NA	NA	65873368	65955417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_65873566_65954073
transcript_129706.known	chr7	-	2199	12	FSM	ENSG00000169919.17	ENST00000304895.9	2199	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	81.824444204782	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTGAAATCATTTCTGT	-65977891	True	NA	-7	True	AATAAA	-29	NA	65982213	65960683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_129711.nic	chr7	-	2064	11	NIC	ENSG00000169919.17	novel	2199	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	154	junction_6	53.2413373235496	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	NA	False	NA	-21	True	AATAAA	-38	NA	65982245	65960697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65976014_65976203_65979398_65979542_65979726_65979912_65980223_65980410_65981973
transcript_129741.known	chr7	-	1859	10	FSM	ENSG00000169919.17	ENST00000430730.5	1859	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	116.572342822434	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTACTGAAAAGCATCT	-65977893	True	NA	-21	True	AATAAA	-38	NA	65982215	65960697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_65961064_65964322_65964459_65967730_65967908_65970281_65970367_65974294_65974442_65974525_65974705_65974918_65975072_65976014_65976203_65980223_65980410_65981973
transcript_129744.known	chr7	+	2140	17	FSM	ENSG00000126522.17	ENST00000304874.14	2140	17	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_14	41.3655578349912	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACAACTAGCCAAACTG	66073646	True	NA	NA	False	ATTAAA	-24	NA	66075818	66093576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129752.known	chr7	+	1436	16	FSM	ENSG00000126522.17	ENST00000673518.1	1436	16	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_7	55.1505414499461	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCTGCTGTGTGTTTCCTG	66073649	True	NA	7	True	AATAAA	-15	NA	66075821	66092953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66075857_66076038_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129756.nic	chr7	+	1345	16	NIC	ENSG00000126522.17	novel	2140	17	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	19	junction_2	55.6151857759092	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCTGTGTGTTTCCTGC	66073624	True	NA	8	True	AATAAA	-16	NA	66075796	66092954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_66075857_66076038_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129767.known	chr7	+	1388	15	FSM	ENSG00000126522.17	ENST00000362000.10	1388	15	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_1	55.8715728529386	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTGTGTTTCCTGCC	66073764	True	NA	9	True	AATAAA	-17	NA	66075936	66092955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129788.known	chr7	+	2774	6	FSM	ENSG00000241258.7	ENST00000395326.8	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	6.82934843158555	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	66111577	True	NA	17	True	AATAAA	-24	NA	66114846	66154568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134375_66145442_66145501_66152207
transcript_129793.nnic	chr7	+	603	5	NNC	ENSG00000241258.7	novel	2774	6	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	28.0757902827329	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATTTTTTTCTTAAA	66111548	True	NA	17	True	AATAAA	-24	NA	66114817	66154568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_66114971_66127703_66127741_66130743_66130843_66134279_66134320_66154294
transcript_129794.known	chr7	+	1393	5	FSM	ENSG00000241258.7	ENST00000338592.5	1393	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	26.7616796931732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCAGGGGTGATGGCAC	66111580	True	NA	NA	False	AATACA	-4	NA	66114849	66153289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66114971_66127703_66127741_66134279_66134375_66145442_66145501_66152207
transcript_129804.known	chr7	+	1974	15	FSM	ENSG00000126522.17	ENST00000380839.9	1974	15	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_6	54.90738956253	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAAATGGAAGCGGAG	66073674	True	NA	NA	False	AATAAA	-11	NA	66075846	66093334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129805.known	chr7	+	1608	16	FSM	ENSG00000126522.17	ENST00000395332.8	1608	16	0	0	0	0	multi-exon	FALSE	canonical	1	54	junction_13	39.3511823908197	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAAGTGGGCGCGAGAG	66073716	True	NA	-14	True	NA	NA	NA	66075888	66092932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089275_66089336_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129806.known	chr7	+	1478	15	FSM	ENSG00000126522.17	ENST00000395331.4	1478	15	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_11	57.1586138990191	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACACCTGCCCCCTAATA	66073771	False	NA	-29	True	NA	NA	NA	66075943	66092917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66076094_66081802_66081998_66082367_66082452_66082879_66082937_66083076_66083175_66086584_66086663_66086743_66086822_66087333_66087387_66087728_66087792_66088806_66088922_66089090_66089176_66089611_66089696_66092005_66092087_66092556_66092664_66092767
transcript_129807.known	chr7	+	492	3	FSM	ENSG00000241258.7	ENST00000398684.6	492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTGTGCCTTGGGGAGA	66111571	True	NA	NA	False	AAAAAG	-3	NA	66114840	66152511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66114971_66145442_66145501_66152207
transcript_129808.known	chr7	-	4621	23	FSM	ENSG00000179406.9	ENST00000638517.1	4621	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6.51571526806884	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGGCATGCACCTGTA	-66490975	False	NA	NA	False	AATAAA	-42	NA	66491616	66388324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66390251_66395878_66395957_66399691_66399796_66400321_66400438_66400922_66401028_66402456_66402546_66407289_66407365_66409059_66409245_66411614_66411703_66427948_66428041_66429678_66429758_66429883_66430018_66439134_66439305_66450070_66450237_66467681_66467720_66476258_66476328_66479008_66479097_66480393_66480449_66481540_66481600_66485094_66485154_66487948_66488039_66489937_66490108_66491030
transcript_129809.known	chr7	+	540	2	FSM	ENSG00000237310.3	ENST00000445681.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	66493214	True	NA	14	True	ATTAAA	-25	NA	66493705	66495474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494026_66495254
transcript_129810.known	chr7	+	454	2	FSM	ENSG00000237310.3	ENST00000452565.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCTTCTGGTTTTTGGGG	66493294	True	NA	12	True	ATTAAA	-23	NA	66493785	66495472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494022_66495254
transcript_129811.known	chr7	+	926	2	FSM	ENSG00000237310.3	ENST00000654121.1	926	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTCTGGTTTTTGGGGTT	66493167	True	NA	14	True	ATTAAA	-25	NA	66493658	66495474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494365_66495254
transcript_129812.known	chr7	+	713	2	FSM	ENSG00000237310.3	ENST00000669130.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTCTTCTGGTTTTTGG	66493224	True	NA	10	True	ATTAAA	-21	NA	66493715	66495470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66494213_66495254
transcript_129816.known	chr7	-	2103	6	FSM	ENSG00000229180.8	ENST00000638711.1	2103	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.9837458719269	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTGAAAGATAGGCACAA	-66590250	True	NA	81	True	NA	NA	NA	66592397	66553484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66554838_66573384_66573551_66576754_66576930_66578528_66578728_66588511_66588581_66592256
transcript_129837.nic	chr7	-	1776	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-76	8718	-22	-84	5prime_fragment	FALSE	canonical	3	33	junction_3	22.905603390146	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATATCATGGATTTCATT	-66590272	False	NA	-3	True	TATAAA	-22	NA	66592419	66553568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_129838.nic	chr7	-	1588	4	ISM	ENSG00000229180.8	ENST00000686397.1	1520	5	-76	8906	-22	-272	5prime_fragment	FALSE	canonical	3	33	junction_3	22.905603390146	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTAGTTGAGCAGCT	-66590272	False	NA	-2	True	AATAAA	-26	NA	66592419	66553756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_66554838_66573384_66573551_66576754_66576933_66592256
transcript_129844.nnic	chr7	-	687	4	NNC	ENSG00000229180.8	novel	717	3	NA	NA	-22	5659	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.7533623350932	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGGACATCAAAACT	-66590272	False	NA	NA	False	TTTAAA	-42	NA	66592419	66567479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_66567660_66573384_66573551_66576754_66576933_66592256
transcript_129847.known	chr7	-	563	3	FSM	ENSG00000229180.8	ENST00000639153.2	635	3	0	72	0	-72	multi-exon	FALSE	canonical	3	20	junction_1	8.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTGTATTCTTCTAGT	-66590239	True	NA	-11	True	TATAAA	-15	NA	66592386	66584102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66584467_66588511_66588581_66592256
transcript_129854.nnic	chr7	-	591	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATATTTGTGCAATGTGT	-66590264	True	NA	61	True	AATATA	-17	NA	66592411	66584030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_66584467_66592256
transcript_129855.nnic	chr7	-	519	2	NIC	ENSG00000229180.8	novel	635	3	NA	NA	-14	-72	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGTGTATTCTTCTAGT	-66590264	True	NA	-11	True	TATAAA	-15	NA	66592411	66584102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_66584467_66592256
transcript_129856.known	chr7	-	395	1	FSM	ENSG00000275400.1	ENST00000622243.1	395	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAACAAATGTTAACATAAT	-66554188	False	NA	-50	True	NA	NA	NA	66554199	66553804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66553800_66554200
transcript_129857.known	chr7	-	1819	6	FSM	ENSG00000229180.8	ENST00000639011.1	1819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.8725932715484	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGGCCCTTTACCATTC	-66590239	True	NA	NA	False	AATAAA	-22	NA	66592386	66530296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66531400_66531790_66531872_66545600_66545687_66554584_66554838_66573384_66573551_66592256
transcript_129858.known	chr7	-	370	1	FSM	ENSG00000225573.4	ENST00000433398.1	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	478	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGCGCGTTGTCAATAAAG	NA	False	NA	NA	False	NA	NA	NA	66607107	66606737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66606700_66607100
transcript_129860.known	chr7	+	625	5	FSM	ENSG00000226824.8	ENST00000656515.2	929	5	46	258	-11	44	multi-exon	FALSE	canonical	1	1	junction_2	1.87082869338697	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCACAGCCCCCAGAGGC	66652607	True	NA	NA	False	NA	NA	NA	66654566	66669342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66654627_66666113_66666203_66667397_66667611_66668763_66668914_66669229
transcript_129861.known	chr7	+	1172	5	FSM	ENSG00000226824.8	ENST00000657342.1	1172	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.58113883008419	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTTATTGAATGAGATGA	66652618	True	NA	NA	False	AATAAA	-2	NA	66654577	66670413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66654627_66666113_66666203_66667397_66667611_66668763_66668914_66669742
transcript_129866.known	chr7	+	3733	9	FSM	ENSG00000154710.18	ENST00000284957.9	3733	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	20.6514981296757	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTTGGTTCTTTCTTAG	66737428	True	NA	20	True	AATAAA	-29	NA	66740732	66811464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66740793_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_129869.known	chr7	+	2654	10	FSM	ENSG00000154710.18	ENST00000607882.5	2654	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	75.7671872690723	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTTTGGAATAATTTTA	66681412	True	NA	NA	False	ATTAAA	-15	NA	66682163	66809662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66682259_66712166_66712225_66739995_66740793_66771882_66772079_66775226_66775394_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_129886.known	chr7	+	2281	10	FSM	ENSG00000154710.18	ENST00000450873.6	2281	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	58.6060292688958	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAGCACCATTTTATT	66737428	True	NA	3	True	AATGAA	-16	NA	66740732	66809817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66740793_66768830_66769026_66771882_66772079_66775226_66775394_66783674_66783842_66795510_66795593_66797373_66797507_66799322_66799415_66805139_66805397_66808885
transcript_129887.known	chr7	-	557	1	FSM	ENSG00000272831.1	ENST00000607978.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATGTATGGCGTAACGT	-66740332	False	NA	82	True	AGTAAA	-24	NA	66740385	66739828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66739800_66740400
transcript_129888.known	chr7	+	4229	7	FSM	ENSG00000106609.16	ENST00000341567.8	4229	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	26.455413224686	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCCGCGTCTTCTTCC	66916014	True	NA	13	True	AATAAA	-14	NA	66921224	66958551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66921462_66941847_66942025_66944975_66945262_66948543_66948695_66950951_66951136_66953225_66953370_66955501
transcript_129891.known	chr7	+	3330	16	FSM	ENSG00000198874.14	ENST00000359626.10	3330	16	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_9	13.5095028282564	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAGCATGAGTTTTTTA	66994980	True	NA	8	True	AATAAA	-18	NA	66996832	67239514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899_67025023_67049948_67050067_67055834_67055888_67067284_67067404_67083429_67083540_67098540_67098719_67117482_67117619_67183125_67183237_67195169_67195338_67238307
transcript_129894.nic	chr7	+	1160	7	ISM	ENSG00000198874.14	ENST00000359626.10	3330	16	-31	214493	-18	7140	5prime_fragment	FALSE	canonical	3	115	junction_2	11.3137084989848	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCGTTACTTTGGGAAA	66994949	True	NA	NA	False	AAGAAA	-6	NA	66996801	67025021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_66996983_66998064_66998196_66998816_66998955_67009582_67009685_67014366_67014562_67017852_67018144_67024899
transcript_129902.known	chr7	-	1531	5	FSM	ENSG00000126524.11	ENST00000414306.5	1531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.776938929297	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATTGTATGTAATCAAT	-66991209	True	NA	24	True	AATATA	-13	NA	66995576	66987743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66988500_66991136_66991302_66993216_66993418_66994219_66994342_66995289
transcript_129903.known	chr7	-	841	4	FSM	ENSG00000126524.11	ENST00000490953.5	841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	140.964140436101	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGATGTTGTAAACGTCAGA	-66991199	True	NA	NA	False	AATAAA	-16	NA	66995566	66991060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_66991302_66993216_66993418_66994219_66994342_66995289
transcript_129910.known	chr7	-	721	6	FSM	ENSG00000067601.9	ENST00000688434.1	933	6	57	155	0	-1	multi-exon	FALSE	canonical	0	0	junction_1	7.91454357496375	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	-67301896	True	NA	NA	False	AATAAA	-18	NA	67302419	67287540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67287720_67292462_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_129914.nic	chr7	-	2353	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	11	-1732	0	1732	multi-exon	FALSE	canonical	3	15	junction_4	3.41869858279434	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGAAAGAAAGTATCA	-67301940	True	NA	NA	False	NA	NA	NA	67302463	67290695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_129916.nic	chr7	-	1066	5	FSM	ENSG00000067601.9	ENST00000689774.1	632	5	-438	4	-427	0	multi-exon	FALSE	canonical	3	15	junction_4	3.41869858279434	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	-67302864	True	NA	NA	False	ATTAAA	-18	NA	67302912	67292431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_67292550_67295617_67295802_67297216_67297304_67299284_67299425_67302375
transcript_12992.known	chr1	-	1771	6	FSM	ENSG00000120334.16	ENST00000367710.7	1771	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	25.4746933249451	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCGTTTATTATGTTTA	-173823806	False	NA	NA	False	AATAAA	-21	NA	173824174	173799849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_129925.nnic	chr7	+	908	4	FSM	ENSG00000106610.16	ENST00000687534.1	890	4	-18	0	16	0	multi-exon	FALSE	canonical	2	5	junction_1	63.7826169282997	272	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGTGAGTGCTCTAAGT	67301040	True	NA	20	True	ATTAAA	-43	NA	67302636	67320404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_67302886_67308934_67309140_67309563_67309716_67320102
transcript_12993.known	chr1	-	2706	6	FSM	ENSG00000120334.16	ENST00000682279.1	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	11.1785508899857	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATGTGTTTATCAATGTC	-173824515	True	NA	NA	False	ATTAAA	-19	NA	173824883	173799549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173800520_173802962_173803506_173807266_173807519_173811131_173811307_173823925_173824020_173824211
transcript_129932.nnic	chr7	+	1747	2	Intergenic	novelGene_58	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGTTAGTTGCAGAGTTT	NA	False	NA	0	True	AATAAA	-14	NA	70836613	70849015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_70837033_70847687
transcript_129943.nnic	chr7	-	509	3	NNC	ENSG00000183166.11	novel	9243	6	NA	NA	115	-104146	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTTATTAGTTACTGTT	-72337045	True	NA	NA	False	AATAAA	-20	NA	72337636	72127802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72128134_72278685_72278811_72337583
transcript_129944.known	chr7	-	3117	14	FSM	ENSG00000277149.5	ENST00000620995.5	3117	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	13.6862562254057	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCAGCATGAGTTTTTTT	-72827518	True	NA	-5	True	AATAAA	-18	NA	72828200	72574512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72575720_72616671_72616840_72628886_72628998_72694686_72694823_72713620_72713799_72728821_72728932_72744483_72744602_72777415_72777534_72802399_72802523_72807065_72807357_72810470_72810666_72815379_72815482_72826854_72826986_72828071
transcript_129955.known	chr7	+	737	5	FSM	ENSG00000225648.6	ENST00000453858.2	1621	5	189	695	149	63	multi-exon	FALSE	canonical	3	50	junction_1	52.9734603362854	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACACCCATCAGTCTCTTC	72829638	False	NA	NA	False	NA	NA	NA	72829655	72836701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_129956.known	chr7	+	963	5	FSM	ENSG00000225648.6	ENST00000456312.5	963	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	67.3994621640262	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGATTGACCTGGGCTG	72827850	True	NA	NA	False	NA	NA	NA	72829500	72836579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829977_72830691_72830814_72831601_72831799_72833763_72833929_72836576
transcript_129957.nnic	chr7	+	1568	5	NNC	ENSG00000225648.6	novel	1621	5	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	67.055946790721	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72827785	True	NA	NA	False	AATAAA	-22	NA	72829435	72837376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_72829784_72830755_72830814_72831601_72831799_72833763_72833929_72836576
transcript_129961.nic	chr7	+	1677	4	FSM	ENSG00000225648.6	ENST00000685034.1	1489	4	-191	3	-156	0	multi-exon	FALSE	canonical	3	81	junction_1	44.6542271235322	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGCTTGTGTTTCTAGA	72829223	False	NA	NA	False	AATAAA	-22	NA	72829268	72837376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72831601_72831799_72833763_72833929_72836576
transcript_129963.known	chr7	+	839	4	FSM	ENSG00000225648.6	ENST00000437201.5	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	60.6648351371882	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATTGTAAACAGTCAGAT	72827856	True	NA	NA	False	AATAAA	-18	NA	72829506	72834006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72830691_72830814_72831601_72831799_72833763
transcript_129968.known	chr7	+	733	3	FSM	ENSG00000225648.6	ENST00000415772.5	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	54	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACATTGTAAACAGTCAGA	72827839	True	NA	NA	False	AATAAA	-17	NA	72829489	72834005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72831601_72831799_72833763
transcript_129969.known	chr7	+	618	3	FSM	ENSG00000225648.6	ENST00000423945.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	36.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCAAAGGTTCTTTGGAAG	72829389	False	NA	NA	False	AATAAA	-13	NA	72829424	72836638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_72829784_72831601_72831799_72836576
transcript_129971.nnic	chr7	+	598	2	ISM	ENSG00000225648.6	ENST00000691023.1	1280	3	-43	3373	1	-2	5prime_fragment	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACATTGTAAACAGTCA	72827775	True	NA	NA	False	AATAAA	-15	NA	72829425	72834003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_72829784_72833763
transcript_129978.known	chr7	-	1789	11	FSM	ENSG00000106133.18	ENST00000388955.8	1789	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	181.429903819629	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954790	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72952151_72952296_72953325_72953431_72953510_72953678_72954358_72954480_72954624
transcript_13.known	ERCC-00033	+	2014	1	FSM	ERCC-00033A	DQ516796	2014	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	2014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00033_+_0_2000
transcript_130006.nnic	chr7	-	1337	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_1	193.074899110855	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954787	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948598_72948667_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_130009.known	chr7	-	1180	7	FSM	ENSG00000106133.18	ENST00000444583.6	1180	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	201.64875953554	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACAGTTTTTTATTCTT	-72953842	True	NA	-1	True	AATAAA	-23	NA	72954713	72948292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948598_72948667_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_13001.known	chr1	-	827	5	FSM	ENSG00000120334.16	ENST00000460816.5	827	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37.7979827504061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTGATAACTTGCCTAA	-173822575	True	NA	NA	False	NA	NA	NA	173824335	173800411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173800520_173807266_173807519_173811131_173811307_173823925_173824020_173824137
transcript_130012.nnic	chr7	-	1327	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	64	junction_3	197.473767596835	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954787	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949233_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_130015.nnic	chr7	-	1504	7	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	27	0	intron_retention	FALSE	canonical	3	36	junction_5	196.247009885218	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	-72953892	True	NA	-6	True	AATAAA	-18	NA	72954763	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954358_72954480_72954624
transcript_130023.nnic	chr7	-	1407	6	NNC	ENSG00000106133.18	novel	1647	12	NA	NA	3	0	intron_retention	FALSE	canonical	3	154	junction_2	183.55119176949	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954787	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_72948809_72948891_72948981_72949102_72949492_72949845_72949962_72950057_72950197_72954624
transcript_130027.nic	chr7	-	1319	6	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	95	junction_2	196.828453227677	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954787	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72948809_72948891_72949103_72949312_72949492_72949845_72949962_72950057_72950197_72954624
transcript_130033.known	chr7	-	1776	5	FSM	ENSG00000106133.18	ENST00000602348.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	236.915069170367	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTCTTTTAATTTAGA	-72953835	True	NA	NA	False	AATAAA	-25	NA	72954706	72947580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72948809_72948891_72949103_72949845_72949962_72950057_72950197_72954624
transcript_130035.nic	chr7	-	1529	5	NIC	ENSG00000106133.18	novel	1789	11	NA	NA	3	0	intron_retention	FALSE	canonical	3	161	junction_4	175.456547327251	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	-6	True	AATAAA	-18	NA	72954787	72948297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_72948809_72948891_72949492_72949845_72949962_72950057_72950197_72954624
transcript_130039.nic	chr7	-	461	2	ISM	ENSG00000106133.18	ENST00000457352.4	1385	10	-46	5673	27	-5673	5prime_fragment	FALSE	canonical	3	391	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAGCGGAGACAGT	-72953892	True	NA	NA	False	ATTAAA	-16	NA	72954763	72954157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_72954480_72954624
transcript_13004.known	chr1	+	3057	16	FSM	ENSG00000117593.12	ENST00000648807.1	3057	16	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_12	83.4472820940796	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAGTACTTTGAAAAAC	173819823	True	NA	-8	True	GATAAA	-5	NA	173824652	173858400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_130040.known	chr7	-	708	1	FSM	ENSG00000272843.1	ENST00000608799.1	708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGTCTGCCAATACACT	-72925115	False	NA	NA	False	AATAAA	-16	NA	72925125	72924417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72924400_72925100
transcript_130041.nnic	chr7	+	466	3	NNC	ENSG00000285886.1	novel	2085	2	NA	NA	27	272	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTCATTTGT	72954804	False	NA	NA	False	ATTAAA	-15	NA	72954823	72957378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_72954903_72955127_72955176_72957039
transcript_130048.known	chr7	-	1262	8	FSM	ENSG00000174353.17	ENST00000423834.6	1262	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	21.3570234110372	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGACAGATGGAGAAG	-73001012	True	NA	NA	False	NA	NA	NA	73005922	72998489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72998791_72999054_72999163_72999470_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005575
transcript_13005.known	chr1	+	3336	17	FSM	ENSG00000117593.12	ENST00000649689.2	3336	17	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_12	34.6495287666369	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTTTTTTTTTTTAG	173819843	True	NA	25	True	ATTAAA	-41	NA	173824672	173858546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173853348_173853568_173853794_173853906_173856665_173856742_173857517
transcript_130053.known	chr7	+	1336	7	FSM	ENSG00000229018.5	ENST00000506558.2	1336	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	8.52447456836295	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	73005514	True	NA	NA	False	NA	NA	NA	73005540	73021103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73006175_73009443_73009584_73011468_73011556_73011731_73011835_73013091_73013278_73016328_73016418_73021006
transcript_13006.known	chr1	+	1793	14	FSM	ENSG00000117593.12	ENST00000648458.1	1793	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	88.2283213395253	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACATGCTGGTGTTTCAT	173824944	False	NA	NA	False	ATTAAA	-19	NA	173824959	173852014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173825357_173826686_173826787_173828332_173828400_173830659_173830762_173831534_173831631_173833375_173833500_173834472_173834520_173836939_173837047_173838189_173838260_173839366_173839547_173840865_173840974_173845228_173845292_173850326_173850480_173851835
transcript_13007.known	chr1	-	632	12	FSM	ENSG00000234741.9	ENST00000687189.1	731	12	8	91	0	0	multi-exon	FALSE	canonical	3	1906	junction_11	643.43628117622	48014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_13008.known	chr1	-	632	8	FSM	ENSG00000234741.9	ENST00000690941.1	1443	8	0	811	0	289	multi-exon	FALSE	canonical	3	1906	junction_7	777.983972344219	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACCATGCCCCGCCTC	-173805433	True	NA	NA	False	NA	NA	NA	173867989	173864954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_130084.known	chr7	-	1716	6	FSM	ENSG00000174353.17	ENST00000448173.5	1716	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	15.3674981698388	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGATGGAGAAGGATGGG	-73001005	True	NA	NA	False	NA	NA	NA	73005915	72998483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_72999551_72999760_72999860_73000357_73000482_73003020_73003138_73003644_73003731_73005692
transcript_13009.known	chr1	-	565	11	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	686	-133	2	0	3prime_fragment	FALSE	canonical	3	2064	junction_5	503.330001092722	11032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_130096.known	chr7	+	710	6	FSM	ENSG00000174384.9	ENST00000333674.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	16.9776323437634	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCACAAATGGTTCCTCT	NA	False	NA	NA	False	NA	NA	NA	73093656	73105389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73093797_73095681_73095769_73095934_73096048_73097383_73097568_73100617_73100707_73105292
transcript_13010.known	chr1	-	979	10	FSM	ENSG00000234741.9	ENST00000412059.6	985	10	4	2	0	0	multi-exon	FALSE	canonical	3	1906	junction_9	700.20675958808	1336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805431	True	NA	-37	True	AATAAA	-14	NA	173867987	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_130102.known	chr7	+	3609	24	FSM	ENSG00000233369.7	ENST00000544802.5	3609	24	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_21	490.628241985364	846	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCACACACTAAGTCATTG	73152585	True	NA	NA	False	AATAAA	-14	NA	73154937	73207283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73155344_73175414_73175526_73176856_73176923_73179086_73179271_73180538_73180598_73182076_73182149_73183114_73183299_73184660_73184720_73190065_73190138_73191370_73191555_73192496_73192556_73192950_73193026_73194625_73194728_73195635_73195702_73195878_73196063_73197963_73198020_73198692_73198774_73199695_73199780_73200448_73200633_73202111_73202141_73203422_73203465_73204562_73204605_73205382_73205459_73206151
transcript_130104.known	chr7	-	1602	10	FSM	ENSG00000130305.17	ENST00000310326.8	1602	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	166.376413926707	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTACGATAGATCACAGT	-73304395	True	NA	-17	True	AATAAA	-12	NA	73308816	73303234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73303525_73303599_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_130105.known	chr7	-	1672	9	FSM	ENSG00000130305.17	ENST00000252594.10	1672	9	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_7	63.2351761284809	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGATAGATCACAGTTTTTT	-73304385	True	NA	-12	True	AATAAA	-17	NA	73308806	73303229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73303741_73303825_73304037_73304229_73304409_73304746_73304863_73304958_73305098_73307393_73307503_73307582_73307758_73308430_73308554_73308697
transcript_130106.nic	chr7	+	824	4	NIC	ENSG00000077800.13	novel	1699	9	NA	NA	12328	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCCAGTATAAGTGAATTG	NA	False	NA	NA	False	AATAAA	-25	NA	73340673	73358625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_73340833_73341255_73341383_73342806_73342900_73358180
transcript_130108.known	chr7	-	1638	6	FSM	ENSG00000106635.8	ENST00000482231.5	1638	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	114.688098772279	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTTTTAAAATTAAACT	-73557133	False	NA	-42	True	NA	NA	NA	73557251	73536387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557040
transcript_130109.known	chr7	-	1663	6	FSM	ENSG00000106635.8	ENST00000223368.7	1663	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	48.9873453046805	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTGGTATCTGAGTGC	-73554875	True	NA	-10	True	ATTAAA	-15	NA	73557690	73536355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73543547_73543645_73552166_73552243_73557486
transcript_13011.known	chr1	-	542	11	FSM	ENSG00000234741.9	ENST00000449289.6	543	11	0	1	0	0	multi-exon	FALSE	canonical	3	90	junction_4	1146.79008105233	2985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGTGTAGTGTTTAC	-173805433	True	NA	-36	True	AATAAA	-15	NA	173867989	173863899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_130110.known	chr7	-	653	5	FSM	ENSG00000106635.8	ENST00000464288.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	154.206638962141	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTATTTATTGCATTCTGG	-73557123	False	NA	NA	False	NA	NA	NA	73557241	73537265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73537391_73537933_73538014_73539881_73540053_73552166_73552243_73557040
transcript_130113.known	chr7	-	4344	7	FSM	ENSG00000106638.18	ENST00000305632.11	4344	7	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_5	17.7263144004111	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCGGTGTATAGCCTATTT	-73576212	True	NA	NA	False	TTTAAA	-1	NA	73578579	73567536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573937_73574123_73574382_73574514_73578419
transcript_130116.known	chr7	-	2209	7	FSM	ENSG00000106638.18	ENST00000450285.5	2209	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	64.0149722070288	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTTTCTGCCATCAA	-73576223	True	NA	-7	True	AATAAA	-28	NA	73578590	73569659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73570973_73571188_73571342_73572843_73572971_73573319_73573472_73573960_73574123_73574382_73574514_73578419
transcript_13012.known	chr1	-	772	10	ISM	ENSG00000234741.9	ENST00000436285.6	805	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2175	junction_4	495.804621017415	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864705_173865228_173865283_173865470_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_13013.known	chr1	-	413	7	ISM	ENSG00000234741.9	ENST00000686995.1	580	11	1785	6	839	0	3prime_fragment	FALSE	canonical	3	178	junction_2	1292.45198707298	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173866195	False	50	-37	True	AATAAA	-14	NA	173866206	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176
transcript_130131.known	chr7	+	1201	12	FSM	ENSG00000071462.12	ENST00000265758.7	1201	12	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_10	59.1651282149732	5630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCATCTCCCAGCTC	73667815	True	NA	4	True	AATAAA	-16	NA	73683596	73698212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_130132.known	chr7	+	1219	13	FSM	ENSG00000071462.12	ENST00000423497.5	1219	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	355.89725226063	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTCTGGCATCTCCCA	73667844	True	NA	0	True	AATAAA	-12	NA	73683625	73698208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697465_73697517_73697604_73697695_73697831
transcript_130133.known	chr7	+	1260	12	FSM	ENSG00000071462.12	ENST00000430270.5	1260	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	283.48393339988	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAACATAATGAAACTTC	73667844	True	NA	NA	False	NA	NA	NA	73683625	73698104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73684001_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73692647_73693328_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_130134.known	chr7	+	1815	11	FSM	ENSG00000071462.12	ENST00000463307.5	1815	11	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_9	60.2979269958761	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGAGAGCATCTTATTT	73667827	True	NA	-52	True	AATGAA	-38	NA	73683608	73698156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73683674_73683766_73683805_73686635_73686732_73686817_73686901_73686998_73687096_73690915_73691013_73692595_73693415_73693623_73693670_73693991_73694051_73697604_73697695_73697831
transcript_13014.known	chr1	-	822	11	FSM	ENSG00000234741.9	ENST00000436656.6	825	11	2	1	0	0	multi-exon	FALSE	canonical	3	1906	junction_10	548.456279023223	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805433	True	NA	-37	True	AATAAA	-14	NA	173867989	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_130142.known	chr7	-	1447	6	FSM	ENSG00000106077.19	ENST00000437775.7	1447	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	55.8762919313728	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735802	True	NA	-7	True	AATAAA	-16	NA	73738852	73736093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738327_73738443_73738645
transcript_130143.known	chr7	-	1463	6	FSM	ENSG00000106077.19	ENST00000357419.9	1463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.8322283004659	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735802	True	NA	-7	True	AATAAA	-16	NA	73738852	73736093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737392_73737561_73737736_73738332_73738464_73738645
transcript_13015.known	chr1	-	745	10	ISM	ENSG00000234741.9	ENST00000422183.6	778	11	948	1	2	0	3prime_fragment	FALSE	canonical	3	2064	junction_4	528.073951985356	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGAGTGTGTAGTGTTT	-173867032	False	62556	-38	True	AATAAA	-13	NA	173867043	173863901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_130152.known	chr7	-	1562	5	FSM	ENSG00000106077.19	ENST00000497897.5	1562	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	67.9889696936201	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735731	True	NA	-7	True	AATAAA	-16	NA	73738781	73736093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737220_73737736_73738332_73738464_73738645
transcript_130154.known	chr7	-	1277	5	FSM	ENSG00000106077.19	ENST00000395147.9	1277	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	50.9362346468602	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735782	True	NA	-7	True	AATAAA	-16	NA	73738832	73736093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737111_73737561_73737736_73738327_73738464_73738645
transcript_130155.known	chr7	-	852	5	FSM	ENSG00000106077.19	ENST00000412965.5	852	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.128450822837	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGTGGTGGCTCATGCCT	-73738709	False	NA	NA	False	NA	NA	NA	73738739	73736535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73736928_73737221_73737561_73737736_73738327_73738464_73738645
transcript_13016.known	chr1	-	483	9	FSM	ENSG00000234741.9	ENST00000452197.5	483	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1270.89515696614	1664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173805427	True	NA	-37	True	AATAAA	-14	NA	173867983	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674_173864705_173865228_173865283_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_130166.known	chr7	+	662	4	FSM	ENSG00000225969.2	ENST00000427153.2	662	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTGCCTGTCTGAGTC	NA	False	NA	NA	False	ATTAAA	-38	NA	73735037	73736158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73735091_73735240_73735500_73735727_73735849_73735929
transcript_130169.known	chr7	-	890	4	FSM	ENSG00000106077.19	ENST00000458339.6	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	65.2703778311588	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCTAGGCAACAGAGCA	-73735773	True	NA	NA	False	NA	NA	NA	73738823	73736289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73736692_73737561_73737736_73738327_73738464_73738645
transcript_13017.known	chr1	-	723	9	ISM	ENSG00000234741.9	ENST00000456812.7	753	10	946	0	2	0	3prime_fragment	FALSE	canonical	3	178	junction_1	1227.85264155557	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGAGTGTGTAGTGTTTA	-173867032	False	62556	-37	True	AATAAA	-14	NA	173867043	173863900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864305_173864674_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_130171.nic	chr7	-	2008	3	NIC	ENSG00000106077.19	novel	1277	5	NA	NA	-23	0	intron_retention	FALSE	canonical	3	144	junction_1	15	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGGGCTGAGGTCTGTG	-73735825	True	NA	-7	True	AATAAA	-16	NA	73738875	73736093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_73737736_73738327_73738464_73738645
transcript_130172.known	chr7	+	1695	1	FSM	ENSG00000189143.10	ENST00000340958.4	1695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1656	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTCTCTGATTTCA	73827393	True	NA	24	True	AATAAA	-24	NA	73830995	73832690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_73831000_73832700
transcript_130173.known	chr7	-	922	6	FSM	ENSG00000165171.11	ENST00000297873.9	922	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	3.13687742827162	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	-73842240	True	NA	-5	True	ATTAAA	-16	NA	73842516	73834589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842017_73842145_73842489
transcript_130175.nnic	chr7	-	814	5	NIC	ENSG00000165171.11	novel	922	6	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	5.35607132140714	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGCATCTGTTCCTGTG	-73842259	True	NA	-5	True	ATTAAA	-16	NA	73842535	73834589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_73835003_73840030_73840121_73840413_73840550_73841069_73841199_73842489
transcript_130179.known	chr7	-	539	5	FSM	ENSG00000165171.11	ENST00000458679.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.41869858279434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGGATGTGGGAAGGCC	-73842240	True	NA	NA	False	AATACA	-38	NA	73842516	73834914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_73835081_73840030_73840121_73841069_73841199_73842017_73842145_73842489
transcript_13018.known	chr1	-	497	8	ISM	ENSG00000234741.9	ENST00000456812.7	753	10	959	583	15	-340	internal_fragment	FALSE	canonical	3	2064	junction_2	596.232422835941	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCAGCTTTTGGTACA	-173867019	False	62556	NA	False	NA	NA	NA	173867030	173864483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864705_173865228_173865283_173865509_173865548_173865856_173865895_173866176_173866207_173866527_173866568_173866760_173866797_173866990
transcript_130182.nic	chr7	-	715	2	ISM	ENSG00000165171.11	ENST00000493174.1	823	4	-19	1895	-19	-1895	5prime_fragment	FALSE	canonical	2	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTCATGTGGACTCAGC	-73842259	True	NA	NA	False	NA	NA	NA	73842535	73841475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_73842145_73842489
transcript_130184.known	chr7	+	2583	32	FSM	ENSG00000049540.19	ENST00000445912.5	2583	32	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	3.90549121142237	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCTTTGTAACCCCATC	NA	False	NA	NA	False	NA	NA	NA	74027788	74068763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74028270_74035363_74035415_74036554_74036585_74037706_74037740_74041215_74041252_74042613_74042707_74042983_74043035_74043117_74043169_74043878_74043921_74045221_74045294_74046187_74046218_74046695_74046768_74047674_74047717_74048141_74048202_74048502_74048557_74051749_74051840_74051923_74051984_74053162_74053310_74054715_74054770_74056270_74056436_74056671_74056714_74057639_74057697_74059885_74060048_74060139_74060185_74060375_74060502_74061100_74061140_74063152_74063225_74063309_74063370_74063620_74063696_74065693_74065733_74066731_74066777_74068656
transcript_13019.known	chr1	-	3145	2	FSM	ENSG00000234741.9	ENST00000650796.1	3145	2	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAATTTTAATAAATTT	-173805435	True	NA	-67	True	ATTAAA	-7	NA	173867991	173863930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173867044_173867959
transcript_130190.known	chr7	+	2312	5	FSM	ENSG00000106682.16	ENST00000677570.1	2312	5	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_1	1570.72871225428	4157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	74107079	True	NA	NA	False	AATAAA	-16	NA	74174355	74197093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_130192.known	chr7	+	2503	6	FSM	ENSG00000106682.16	ENST00000353999.6	2503	6	0	0	0	0	multi-exon	FALSE	canonical	3	3199	junction_1	339.923167789429	5953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74194740_74194879_74195168
transcript_130193.known	chr7	+	2563	7	FSM	ENSG00000106682.16	ENST00000265753.13	2563	7	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_4	1552.64065385394	4360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATGCTTGCCTTTATTT	74107079	True	NA	NA	False	AATAAA	-19	NA	74174355	74197096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74187610_74187799_74189672_74189738_74189821_74189919_74190246_74190307_74194740_74194879_74195168
transcript_130194.known	chr7	+	2148	3	FSM	ENSG00000106682.16	ENST00000679287.1	2148	3	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	1738	4151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTAATGCTTGCCTTTA	74107081	True	NA	NA	False	AATAAA	-16	NA	74174357	74197093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74174443_74194740_74194879_74195168
transcript_13020.known	chr1	-	424	4	ISM	ENSG00000234741.9	ENST00000451607.5	1007	12	2824	-80	1	-23	3prime_fragment	FALSE	canonical	3	3349	junction_1	119.622554543679	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGCACAAGAAGATTAAAACA	-173864894	False	NA	-90	True	NA	NA	NA	173864905	173863953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173864076_173864256_173864305_173864483_173864507_173864674
transcript_130203.known	chr7	-	1685	11	FSM	ENSG00000049541.11	ENST00000055077.8	1685	11	0	0	0	0	multi-exon	FALSE	canonical	3	1016	junction_5	112.176869273483	1502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGGTGACCATGTGAAGCC	-74243111	True	NA	-25	True	AATAAA	-23	NA	74254399	74231501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_130204.known	chr7	-	1576	10	FSM	ENSG00000049541.11	ENST00000352131.7	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	148	junction_6	335.630418433398	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCATGTGAAGCCTCG	-74243101	True	NA	-22	True	AATAAA	-26	NA	74254389	74231498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74249011_74249119_74249738_74249781_74252428_74252499_74254270
transcript_130205.known	chr7	-	1635	10	FSM	ENSG00000049541.11	ENST00000621097.4	1635	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	362.554142401986	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGGTGACCATGTGAAG	-74243170	True	NA	-27	True	AATAAA	-21	NA	74254458	74231503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74232217_74235531_74235646_74237361_74237443_74238922_74238989_74239937_74240096_74243145_74243247_74246661_74246764_74249738_74249781_74252428_74252499_74254270
transcript_130206.known	chr7	-	1029	2	FSM	ENSG00000287815.2	ENST00000661689.2	1050	2	21	0	21	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAGAGACCTTGTCTCA	-74289246	True	NA	NA	False	NA	NA	NA	74289286	74280746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74281551_74289061
transcript_13021.known	chr1	-	583	7	FSM	ENSG00000234741.9	ENST00000456293.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_6	859.455722471431	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTTTTAAAGAAGCAAAG	-173805435	True	NA	85	True	ATTAAA	-44	NA	173867991	173865248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173865283_173865509_173865548_173865856_173866207_173866527_173866568_173866760_173866797_173866990_173867044_173867959
transcript_130210.known	chr7	+	865	2	FSM	ENSG00000263001.8	ENST00000652150.1	865	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCTAATATTTATATA	74650211	True	NA	NA	False	ATTAAA	-23	NA	74650230	74651491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_74650797_74651192
transcript_13022.known	chr1	-	1060	3	FSM	ENSG00000234741.9	ENST00000421068.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_2	997	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGATGGTGATATGCTTA	-173805431	True	NA	NA	False	AATGAA	-25	NA	173867987	173865817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173866797_173866990_173867044_173867959
transcript_130221.known	chr7	-	2130	8	FSM	ENSG00000277072.5	ENST00000426587.5	2130	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	12.8555554575619	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGAAGCCCCATTGT	NA	False	NA	-25	True	AGTAAA	-16	NA	74890610	74882162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74885022_74885147_74887682_74887800_74888311_74888398_74890387
transcript_130227.nic	chr7	-	1094	7	NIC	ENSG00000277072.5	novel	1017	10	NA	NA	-13	245	combination_of_known_junctions	FALSE	canonical	2	7	junction_6	14.7845640224301	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACAAATGGAGAA	-74888294	True	NA	NA	False	NA	NA	NA	74890586	74883167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_130228.nic	chr7	-	981	7	ISM	ENSG00000289346.1	ENST00000625377.3	4346	23	-5	87018	-5	-87018	5prime_fragment	FALSE	canonical	3	13	junction_3	13.2790561913614	128	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACAAATGGAGAA	-74888298	True	NA	NA	False	NA	NA	NA	74890590	74883167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_74883464_74883727_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_13023.known	chr1	+	2300	5	FSM	ENSG00000185278.15	ENST00000427304.5	2300	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.34477204006491	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGAATACTGGTGG	173867739	True	NA	NA	False	NA	NA	NA	173868354	173886636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_173868406_173868924_173869121_173870196_173871149_173873466_173873567_173885635
transcript_130234.nic	chr7	-	876	6	ISM	ENSG00000277072.5	ENST00000652688.1	857	7	-17	14911	-17	248	5prime_fragment	FALSE	canonical	2	3	junction_1	17.1510932596147	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACAAATGGAGAAGGA	-74888298	True	NA	NA	False	NA	NA	NA	74890590	74883164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_74883464_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_13024.known	chr1	-	407	2	FSM	ENSG00000120334.16	ENST00000493233.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCCTTTGTGTTAGTCAA	-173823777	False	1760	NA	False	NA	NA	NA	173824145	173811119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_173811307_173823925
transcript_130240.nic	chr7	-	1245	6	NIC	ENSG00000277072.5	novel	2130	8	NA	NA	-17	245	intron_retention	FALSE	canonical	3	13	junction_2	14.00856880627	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGACAAATGGAGAA	-74888298	True	NA	NA	False	NA	NA	NA	74890590	74883167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_74883836_74884143_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_130243.known	chr7	-	1047	5	FSM	ENSG00000277072.5	ENST00000611766.4	1047	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	13.8089644796415	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGCCTGGCCTCTGCTGTGG	-74888274	True	NA	NA	False	NA	NA	NA	74890566	74883766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890270
transcript_130244.nic	chr7	-	1555	5	NIC	ENSG00000277072.5	novel	1026	6	NA	NA	-17	247	intron_retention	FALSE	canonical	3	13	junction_1	15.0748134316813	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAAATGGAGAAGG	-74888298	True	NA	NA	False	NA	NA	NA	74890590	74883165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_74884224_74884433_74884525_74887682_74887800_74888311_74888398_74890387
transcript_130248.nnic	chr7	+	895	7	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3379	7914	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	13.1244047484067	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	74890716	False	NA	NA	False	AATAAA	-19	NA	74890736	74905749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74896398_74896512_74897651_74897836_74900886_74900976_74905577
transcript_13025.known	chr1	-	799	6	ISM	ENSG00000234741.9	ENST00000693469.1	1886	7	1	1267	-1	76	5prime_fragment	FALSE	canonical	3	1906	junction_5	742.058649973168	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTGCAGCGGCACTATC	-173805432	True	NA	NA	False	NA	NA	NA	173867988	173865167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_173865548_173865856_173865895_173866176_173866207_173866527_173866797_173866990_173867044_173867959
transcript_130259.nnic	chr7	+	782	6	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3379	7914	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	6.59090282131363	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	74890716	False	NA	NA	False	AATAAA	-19	NA	74890736	74905749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886_74900976_74905577
transcript_13026.known	chr1	+	335	2	FSM	ENSG00000224977.2	ENST00000424181.1	335	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTGTCCCTTGTGGAA	174022424	True	NA	NA	False	TTTAAA	-2	NA	174022508	174022985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174022641_174022782
transcript_130274.nnic	chr7	+	641	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3379	3171	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_3	7.22409163839994	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	74890716	False	NA	NA	False	ATTAAA	-18	NA	74890736	74901006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74900886
transcript_130275.nnic	chr7	+	693	5	NNC	ENSG00000123965.13	novel	516	4	NA	NA	-3379	7914	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	4.84767985741633	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	74890716	False	NA	NA	False	AATAAA	-19	NA	74890736	74905749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_74890847_74894117_74894258_74896145_74896233_74897651_74897836_74905577
transcript_13028.nic	chr1	+	1586	9	NIC	ENSG00000152061.24	novel	6282	8	NA	NA	-99	0	combination_of_known_junctions	FALSE	canonical	3	167	junction_8	32.2335229225724	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAAACCTAAACATCTTAA	NA	False	NA	NA	False	NA	NA	NA	174874358	174990409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833_174982906_174988640_174988839_174989848
transcript_130292.known	chr7	-	2309	11	FSM	ENSG00000274523.5	ENST00000610322.5	2309	11	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_2	14.2481577756565	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGAAGAGATCTTCTTA	-75069496	True	NA	-26	True	AATAAA	-28	NA	75073802	75042182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75043110_75052710_75052797_75055900_75056075_75057528_75057617_75058587_75058770_75061206_75061292_75063291_75063344_75064581_75064649_75066663_75066793_75070639_75070770_75073413
transcript_130295.nnic	chr7	-	877	7	Fusion	ENSG00000276840.1_ENSG00000278416.1	novel	612	5	NA	NA	512	78	multi-exon	FALSE	canonical	1	3	junction_3	3.1091263510296	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	75359038	75288041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_75288214_75292801_75292891_75295940_75296127_75297394_75297508_75297673_75297761_75299653_75299789_75358943
transcript_130296.nnic	chr7	-	871	7	Fusion	ENSG00000273598.1_ENSG00000276840.1_ENSG00000278416.1	novel	612	5	NA	NA	518	78	multi-exon	FALSE	canonical	2	3	junction_3	3.0368111930481	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	75359032	75288041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_75288214_75292801_75292891_75295940_75296127_75297394_75297508_75297673_75297761_75327623_75327759_75358943
transcript_130301.nnic	chr7	-	736	6	Fusion	ENSG00000276840.1_ENSG00000278416.1	novel	612	5	NA	NA	512	-4651	multi-exon	FALSE	canonical	1	3	junction_2	3.26190128606002	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	NA	False	NA	NA	False	ATTAAA	-18	NA	75359038	75292770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_75292891_75295940_75296127_75297394_75297508_75297673_75297761_75299653_75299789_75358943
transcript_130341.nnic	chr7	+	987	7	ISM	ENSG00000205583.14	ENST00000687422.1	1711	8	8	1027	8	-11	5prime_fragment	FALSE	canonical	3	55	junction_3	6.9940450861191	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGACAGATGG	75359196	True	NA	NA	False	NA	NA	NA	75359208	75366619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_75359410_75361373_75361460_75361971_75362089_75365254_75365354_75365563_75365644_75365951_75366060_75366323
transcript_13036.known	chr1	+	3074	7	FSM	ENSG00000152061.24	ENST00000635248.1	3074	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	5.61990510002912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCATTCAAGACTATTTG	174158272	True	NA	NA	False	AATAAA	-22	NA	174159580	174246346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174159658_174219124_174219296_174220971_174221165_174231144_174231356_174241482_174241658_174242981_174243180_174244297
transcript_130367.nic	chr7	+	1329	6	FSM	ENSG00000223705.10	ENST00000689022.1	1269	6	-65	5	-33	0	multi-exon	FALSE	canonical	3	102	junction_4	124.798397425608	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	17	True	AATAAA	-18	NA	75410288	75416787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415771_75415980_75416192_75416274
transcript_130369.nic	chr7	+	1337	6	FSM	ENSG00000223705.10	ENST00000691741.1	1283	6	-61	7	-33	0	multi-exon	FALSE	canonical	3	85	junction_4	129.378514445019	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	NA	False	NA	17	True	AATAAA	-18	NA	75410288	75416787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75415779_75415980_75416192_75416274
transcript_13037.known	chr1	+	710	7	FSM	ENSG00000152061.24	ENST00000465412.5	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_5	32.8705372974374	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGGTAAGGAGTGAAATC	174870695	False	NA	NA	False	NA	NA	NA	174874470	174982900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174969276_174969388_174976077_174976183_174978806_174978891_174982833
transcript_130373.known	chr7	+	972	6	FSM	ENSG00000223705.10	ENST00000422386.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	163.857987293876	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409607	True	NA	17	True	AATAAA	-18	NA	75410394	75416787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415980_75416031_75416102_75416192_75416274
transcript_130380.known	chr7	+	1286	5	FSM	ENSG00000178809.12	ENST00000447409.6	1286	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.04633819296811	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCGCCTATA	NA	False	NA	NA	False	AATAAA	-14	NA	75398141	75405605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75398263_75398915_75399333_75403644_75403741_75404838_75405070_75405184
transcript_130381.nic	chr7	+	1487	5	FSM	ENSG00000223705.10	ENST00000687621.1	1476	5	-11	0	-9	0	multi-exon	FALSE	canonical	3	130	junction_1	104.986903945206	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATAGATCACAGTTTTTTA	75409553	True	NA	17	True	AATAAA	-18	NA	75410340	75416787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75410461_75414884_75415024_75415119_75415235_75415591_75416192_75416274
transcript_130392.nic	chr7	+	499	2	ISM	ENSG00000223705.10	ENST00000473960.1	500	3	-38	612	-38	-612	5prime_fragment	FALSE	canonical	3	360	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAGCGGAGACAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	75410283	75410927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_75410461_75410605
transcript_130395.known	chr7	-	1490	9	FSM	ENSG00000127957.19	ENST00000418756.5	1490	9	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_5	11.0333301863037	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTTTCTCATA	-75526718	True	NA	NA	False	ATTAAA	-15	NA	75528123	75507752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75507868_75510930_75511115_75512308_75512422_75512588_75512676_75514644_75514780_75515717_75515829_75516093_75516221_75525904_75525964_75527564
transcript_130402.known	chr7	-	503	2	FSM	ENSG00000127946.17	ENST00000479835.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCCTGCCCTCAAAAAAA	-75738420	True	NA	NA	False	NA	NA	NA	75738962	75733459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75733801_75738800
transcript_130404.nnic	chr7	-	966	2	NNC	ENSG00000127946.17	novel	583	6	NA	NA	-27354	-16337	at_least_one_novel_splicesite	FALSE	canonical	3	71	junction_1	0	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAAGAGAGTTTTTTTTT	-75635285	True	NA	NA	False	NA	NA	NA	75639197	75598428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75599248_75639050
transcript_130406.known	chr7	-	419	2	FSM	ENSG00000127946.17	ENST00000485723.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTTTCTTCTTTTTTT	-75738393	True	NA	NA	False	AATGAA	-18	NA	75738935	75654412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75654697_75738800
transcript_130428.nnic	chr7	-	705	4	NNC	ENSG00000006606.9	novel	703	4	NA	NA	1590	0	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_3	40.4502437844597	1374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75788276	False	NA	-17	True	AATAAA	-14	NA	75788306	75769537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_75769790_75771888_75772004_75772103_75772255_75788119
transcript_130432.known	chr7	-	703	4	FSM	ENSG00000006606.9	ENST00000394905.2	703	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	120.169324982155	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTCATAACATTTTTTG	NA	False	NA	-12	True	AATAAA	-19	NA	75789896	75769532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75769790_75771888_75772004_75772103_75772255_75789716
transcript_130437.known	chr7	-	475	3	FSM	ENSG00000006606.9	ENST00000005180.9	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	15.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACTTGTTCATAACATT	-75772090	True	NA	-17	True	AATAAA	-14	NA	75772211	75769537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75769790_75771888_75772004_75772103
transcript_130441.known	chr7	+	1831	5	FSM	ENSG00000005486.17	ENST00000454791.1	1831	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	116.112822289358	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTCTGCCTTTGTAT	75875641	True	NA	-31	True	NA	NA	NA	75879003	75888884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75879261_75881364_75881487_75881828_75882237_75883697_75883849_75887991
transcript_130445.known	chr7	+	1721	4	FSM	ENSG00000005486.17	ENST00000006777.11	1721	4	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_3	10.0332779621949	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCTGGCGTGTGCTTCCT	75875671	True	NA	11	True	TATAAA	-20	NA	75879033	75888926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75879261_75881828_75882237_75883697_75883849_75887991
transcript_130452.known	chr7	+	2446	16	FSM	ENSG00000127948.16	ENST00000461988.6	2446	16	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	57.3175947390212	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75903994	True	NA	26	True	AATAAA	-16	NA	75915154	75986855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158_75986242_75986336
transcript_130456.known	chr7	+	2532	15	FSM	ENSG00000127948.16	ENST00000394893.5	2532	15	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	58.9690337276736	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75904003	True	NA	26	True	AATAAA	-16	NA	75915163	75986855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75915180_75953988_75954181_75972412_75972462_75979450_75979580_75980338_75980489_75981047_75981173_75981516_75981607_75982223_75982323_75983519_75983637_75983737_75983857_75984776_75984959_75985057_75985208_75985578_75985850_75985922_75986069_75986158
transcript_13046.known	chr1	+	524	4	FSM	ENSG00000152061.24	ENST00000529474.2	524	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.49691252107735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTGTCGTTAAAGGAAGA	174238692	True	NA	NA	False	NA	NA	NA	174238821	174244320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174238950_174241482_174241658_174242981_174243180_174244297
transcript_130463.known	chr7	-	1398	12	FSM	ENSG00000189077.11	ENST00000493111.7	1398	12	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_10	28.0748703845172	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCAGAGGTTATTTAAAA	-75992954	True	NA	-32	True	AATACA	-22	NA	75994595	75986830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_130464.known	chr7	-	1161	12	FSM	ENSG00000189077.11	ENST00000439537.5	1161	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	68.3105451486987	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGCGTGTGTGTTCTC	-75992933	True	NA	-3	True	AATAAA	-17	NA	75994574	75986984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987224_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988149_75988251_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_130469.known	chr7	-	1352	11	FSM	ENSG00000189077.11	ENST00000440632.5	1352	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_9	27.7454500774451	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCCTGAAGGAAGACCTG	-75993015	True	NA	-59	True	NA	NA	NA	75994656	75987040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987286_75987359_75987429_75987537_75987603_75987717_75987811_75987922_75987985_75988082_75988342_75988420_75988517_75989164_75989225_75992143_75992261_75992438_75992558_75994489
transcript_13048.known	chr1	+	648	4	FSM	ENSG00000152061.24	ENST00000478442.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	60.1793615416079	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTAGTGGTGTTTGTT	174870682	True	NA	14	True	AATAAA	-20	NA	174874457	174958182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174874507_174877391_174877606_174957456_174957550_174957890
transcript_130490.known	chr7	+	1028	4	FSM	ENSG00000127948.16	ENST00000493973.1	1028	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_3	20.2703943940144	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTGGTATTGTGTGAG	75985543	False	NA	26	True	AATAAA	-16	NA	75985569	75986855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_75985850_75985922_75986069_75986158_75986242_75986336
transcript_130491.known	chr7	-	641	5	FSM	ENSG00000189077.11	ENST00000493251.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	112.828409542987	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGCCTGAGCGTGTGTGT	-75986570	False	NA	-7	True	AATAAA	-13	NA	75988211	75986988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75987286_75987359_75987420_75987717_75987811_75987922_75987985_75988082
transcript_130502.known	chr7	-	1415	9	FSM	ENSG00000127952.17	ENST00000248600.5	1415	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	58.5948749892002	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTGTACTGATTCTT	-76045787	True	NA	-10	True	NA	NA	NA	76048003	75996337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047661
transcript_130504.known	chr7	-	1411	9	FSM	ENSG00000127952.17	ENST00000359697.8	1411	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	60.506068910482	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045784	True	NA	-14	True	NA	NA	NA	76048000	75996341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047661
transcript_130519.known	chr7	-	953	7	FSM	ENSG00000127952.17	ENST00000340062.9	953	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	65.5413355575447	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGCCTCCTGTACTGAT	-76045767	True	NA	-14	True	NA	NA	NA	76047983	75996341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76028641_76028704_76030420_76030525_76047811
transcript_130520.known	chr7	-	1147	9	FSM	ENSG00000127952.17	ENST00000431581.5	1147	9	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_8	49.1259541892063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGGCCAGAGTGTGTATA	-76045737	True	NA	-81	True	NA	NA	NA	76047953	75996408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76013741_76013888_76021850_76021993_76028641_76028704_76030420_76030528_76047811
transcript_130521.known	chr7	-	636	5	FSM	ENSG00000127952.17	ENST00000460184.2	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	35.2987251894456	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGCCTCAGGTAGGGCCA	-76047982	False	NA	NA	False	NA	NA	NA	76048004	76013752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_76013888_76021850_76021993_76028641_76028704_76030420_76030525_76047811
transcript_130522.known	chr7	-	764	6	FSM	ENSG00000127952.17	ENST00000438695.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	67.3361715573435	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGCTGCCTGAAAGT	NA	False	NA	-38	True	NA	NA	NA	76028672	75996365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_75996600_76000889_76001003_76003757_76003856_76005258_76005405_76021850_76021993_76028641
transcript_130526.known	chr7	+	2020	8	FSM	ENSG00000146701.12	ENST00000443006.5	2020	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	911.988207048709	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATACTTGTCCTCTCTTGCA	76024841	True	NA	17	True	AATAAA	-21	NA	76048084	76067506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76048227_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_130527.known	chr7	+	648	2	FSM	ENSG00000146701.12	ENST00000461263.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGCTCGCATTGCCTT	76024807	True	NA	8	True	ATTAAA	-19	NA	76048050	76049047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76048227_76048575
transcript_130528.known	chr7	+	2170	9	FSM	ENSG00000146701.12	ENST00000315758.10	2170	9	0	0	0	0	multi-exon	FALSE	canonical	3	2650	junction_8	101.343398280302	3973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTCCTCTCTTGCATA	76024862	True	NA	19	True	AATAAA	-23	NA	76048105	76067508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76048227_76054829_76054999_76057409_76057494_76057968_76058079_76060372_76060499_76063514_76063593_76064338_76064439_76064801_76064954_76066278
transcript_13053.nnic	chr1	+	532	3	NIC	ENSG00000152061.24	novel	648	4	NA	NA	-93	0	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	47	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	NA	False	NA	19	True	AATAAA	-25	NA	174874364	174958187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_174874507_174957456_174957550_174957890
transcript_130531.known	chr7	+	527	3	FSM	ENSG00000106211.10	ENST00000429938.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1764	10009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGCCCAGGCCCTGGTG	76303486	False	NA	65	True	AATAAA	-20	NA	76303576	76304295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76303728_76303801_76303866_76303983
transcript_130533.known	chr7	+	772	3	FSM	ENSG00000106211.10	ENST00000674638.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1775.5	2846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCACTGGCCCAGGCCCTG	76283919	True	NA	62	True	AATAAA	-17	NA	76302672	76304292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76303077_76303806_76303866_76303983
transcript_130535.known	chr7	-	3705	2	FSM	ENSG00000170027.7	ENST00000307630.5	3705	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCAGTGCTCCTTAGCTTC	-76320395	True	NA	-20	True	AATAAA	-14	NA	76358991	76326798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_76330234_76358721
transcript_130537.known	chr7	+	1483	9	FSM	ENSG00000188372.15	ENST00000336517.8	1483	9	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_2	10.6763465192921	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCGTGGTGTGGTGGT	76397309	True	NA	NA	False	AATAAA	-15	NA	76397517	76442071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76397798_76425051_76425277_76429514_76429634_76432926_76433031_76433469_76433648_76434037_76434156_76440249_76440342_76440474_76440612_76441841
transcript_13054.known	chr1	+	772	4	FSM	ENSG00000152061.24	ENST00000486220.5	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	98.4287672493272	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGTGTTTGTTGCAAC	174874771	False	NA	19	True	AATAAA	-25	NA	174875545	174958187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_174875714_174877391_174877606_174957456_174957550_174957890
transcript_130543.nnic	chr7	-	649	2	NNC	ENSG00000146700.9	novel	2800	11	NA	NA	-50	-17124	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATTAATTAATTTGAAAG	-76408194	True	NA	NA	False	AATAAA	-31	NA	76409747	76406460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_76406776_76409413
transcript_130546.known	chr7	+	2769	12	FSM	ENSG00000091073.20	ENST00000324432.9	2769	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	100.663090809093	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457826	True	NA	24	True	AATAAA	-16	NA	76461700	76505991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76461837_76463544_76463710_76470299_76470420_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_130547.known	chr7	+	2641	11	FSM	ENSG00000091073.20	ENST00000430490.7	2641	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	85.8976134709225	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	76457834	True	NA	24	True	AATAAA	-16	NA	76461708	76505991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_130549.known	chr7	+	2472	10	FSM	ENSG00000091073.20	ENST00000413936.6	2472	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	94.3454383019924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCAGGTCCTGAGTGTGTGC	76457841	True	NA	27	True	AATAAA	-19	NA	76461715	76505994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76497336_76497478_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_130550.nic	chr7	+	2533	10	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	114	junction_2	48.3505716385833	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461675	76505991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_76461837_76463544_76463710_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_130553.nic	chr7	+	2373	9	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	59.1349093175934	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461670	76505991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_76461837_76480420_76480778_76482507_76483148_76492152_76492254_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_130554.nnic	chr7	+	1270	6	NIC	ENSG00000091073.20	novel	2641	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	93.0346172131643	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCAGGTCCTGAGTGTG	NA	False	NA	24	True	AATAAA	-16	NA	76461675	76505991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_76461837_76500440_76500521_76502297_76502457_76503425_76503588_76504355_76504446_76505373
transcript_130561.known	chr7	+	748	4	FSM	ENSG00000205485.13	ENST00000423084.1	748	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGTTCTACATCAGAACC	NA	False	NA	NA	False	NA	NA	NA	76549410	76621388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_76549657_76551463_76551523_76615493_76615664_76621115
transcript_130564.known	chr7	-	3200	31	FSM	ENSG00000186088.16	ENST00000257626.12	3200	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	2.16641024123626	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGCCTGACTTTCCCT	-77416307	False	NA	NA	False	ATTAAA	-16	NA	77416349	77310750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77311450_77311840_77311941_77312100_77312203_77313487_77313550_77314369_77314490_77320724_77320820_77321332_77321404_77323646_77323743_77326211_77326274_77328605_77328638_77329332_77329392_77330238_77330368_77349350_77349405_77352943_77353027_77353571_77353642_77355212_77355431_77355554_77355648_77360823_77360902_77362582_77362661_77374069_77374156_77375057_77375102_77376847_77376908_77377285_77377391_77381304_77381355_77382573_77382644_77387359_77387449_77396981_77397036_77397345_77397416_77404558_77404616_77406028_77406106_77416212
transcript_130565.known	chr7	+	3384	18	FSM	ENSG00000127947.16	ENST00000248594.11	3384	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	65.8814600779834	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTTGTTGCCTTGGCTT	77536350	False	NA	19	True	ATTAAA	-23	NA	77537294	77640069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77537646_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_130566.known	chr7	+	2316	18	FSM	ENSG00000127947.16	ENST00000415482.6	2316	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	70.3301163052897	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGGGAGCTAGAAGACAC	77537896	True	NA	NA	False	NA	NA	NA	77538034	77639280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77538107_77571077_77571187_77581426_77581504_77583554_77583651_77585542_77585582_77592184_77592257_77597841_77597902_77600663_77600807_77607234_77607302_77610764_77610843_77610947_77611047_77618479_77618566_77626704_77627676_77632347_77632426_77635781_77635850_77637017_77637049_77638623_77638732_77639218
transcript_130569.known	chr7	-	3168	3	FSM	ENSG00000214293.10	ENST00000654794.2	3180	3	12	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	2.5	843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGCTATCCAGTTTA	-77694718	True	NA	-10	True	AATAAA	-4	NA	77696265	77681580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684252_77685201_77685329_77695895
transcript_130570.nnic	chr7	-	686	3	FSM	ENSG00000214293.10	ENST00000687769.1	641	3	-42	-3	-1	0	multi-exon	FALSE	canonical	2	10	junction_2	54	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-77694728	True	NA	NA	False	AATAAA	-16	NA	77696275	77683850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684252_77685201_77685329_77696117
transcript_130571.known	chr7	-	2856	3	FSM	ENSG00000214293.10	ENST00000663654.2	2875	3	19	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	44	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCGGAGCTGTGAGAAAT	-77694708	True	NA	-36	True	NA	NA	NA	77696255	77681606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684252_77685201_77685329_77696171
transcript_130572.nic	chr7	-	1283	3	FSM	ENSG00000214293.10	ENST00000690779.1	977	3	-306	0	-291	0	multi-exon	FALSE	canonical	3	6	junction_1	53.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGTGTATTACAGGTTAA	-77696503	False	NA	NA	False	AATAAA	-16	NA	77696568	77683850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684334_77685201_77685329_77695895
transcript_130574.known	chr7	-	609	3	FSM	ENSG00000214293.10	ENST00000416650.5	609	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	12	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAAATTGTGTAGG	-77694715	True	NA	NA	False	AAAACA	-38	NA	77696262	77683942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77684334_77685201_77685329_77696171
transcript_130576.known	chr7	-	902	2	FSM	ENSG00000214293.10	ENST00000447009.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATCACATATACAGAAG	-77694706	True	NA	NA	False	ATTAAA	-37	NA	77696253	77684784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77685329_77695895
transcript_130579.known	chr7	+	6406	8	FSM	ENSG00000187257.16	ENST00000334955.13	6406	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	14.7841614091374	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTTACTTTTGTAATT	77694391	True	NA	12	True	AATAAA	-21	NA	77696458	77783022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77697056_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_130584.nic	chr7	+	843	3	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-65	33535	-65	-23866	5prime_fragment	FALSE	canonical	3	83	junction_1	1.5	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAACACAAAGAGA	NA	False	NA	-12	True	ATTAAA	-18	NA	77696393	77749487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_77697056_77736409_77736527_77749423
transcript_130585.nic	chr7	+	707	2	ISM	ENSG00000187257.16	ENST00000334955.13	6406	8	-65	46568	-65	-36899	5prime_fragment	FALSE	canonical	3	83	junction_1	0	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAGAAAAAAAGAAACATAAA	NA	False	NA	NA	False	ATTAAA	-23	NA	77696393	77736454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_77697056_77736409
transcript_130586.known	chr7	+	2667	8	FSM	ENSG00000187257.16	ENST00000445288.5	2667	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.5624328134234	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGACAAACTGACAATTCA	77697131	True	NA	38	True	AATAAA	-22	NA	77697150	77779682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77697349_77736409_77736527_77749423_77750065_77765494_77765633_77768660_77768804_77773146_77773315_77778337_77778447_77778529
transcript_130587.known	chr7	-	877	2	FSM	ENSG00000135211.6	ENST00000257663.4	877	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	2497	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTACATGACTCTTGA	-77795587	True	NA	-9	True	AATAAA	-18	NA	77798434	77793727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_77794424_77798253
transcript_130589.known	chr7	+	1977	12	FSM	ENSG00000006576.16	ENST00000424760.5	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_10	12.35695006367	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTAATTTTGTTTT	77796535	True	NA	2	True	AATAAA	-15	NA	77798812	77940459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709_77937839_77940029
transcript_130591.nic	chr7	+	1972	11	ISM	ENSG00000006576.16	ENST00000424760.5	1977	12	-57	2253	-36	193	5prime_fragment	TRUE	canonical	3	78	junction_10	12.6728055299527	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTATTTTTCTGTATCAT	77796478	True	NA	NA	False	AATAAA	-15	NA	77798755	77938206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622_77922779_77929108_77929328_77937709
transcript_130595.known	chr7	+	1738	9	FSM	ENSG00000006576.16	ENST00000415251.6	1738	9	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_8	6.10327780786685	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTACTCTTTTTGAGCT	77796610	True	NA	NA	False	AATAAA	-33	NA	77798887	77923392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761_77901921_77908792_77908959_77910244_77910410_77920278_77920466_77922622
transcript_130598.nic	chr7	+	744	5	ISM	ENSG00000006576.16	ENST00000415251.6	1738	9	-132	21310	-36	-20804	5prime_fragment	FALSE	canonical	3	111	junction_4	3.93700393700591	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTTATTTTTCAGTATAA	77796478	True	NA	NA	False	AATAAA	-44	NA	77798755	77902082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_77798972_77840220_77840301_77893607_77893665_77900710_77900781_77901761
transcript_130602.known	chr7	-	2013	9	FSM	ENSG00000187391.22	ENST00000628781.1	2013	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	7.0178344238091	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTTGTTTTTGAATTCA	-78770131	False	NA	-21	True	AATAAA	-37	NA	78771080	78255788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_78256582_78343777_78343961_78345921_78346044_78369155_78369214_78489760_78489841_78501576_78501788_78521429_78521646_78627119_78627240_78770850
transcript_130607.nic	chr7	-	1145	4	ISM	ENSG00000187391.22	ENST00000628781.1	2013	9	-275	245695	-32	237	5prime_fragment	FALSE	canonical	3	46	junction_2	4.24264068711928	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAACATGAAATTCTGG	NA	False	NA	NA	False	TATAAA	-39	NA	78771355	78501483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_78501788_78521429_78521646_78627119_78627240_78770850
transcript_130610.known	chr7	-	1605	4	FSM	ENSG00000187391.22	ENST00000635863.1	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAATAAAGCTTGTAGG	-78568276	True	NA	NA	False	NA	NA	NA	78568364	78518063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_78519127_78521429_78521646_78567948_78568005_78568094
transcript_130613.known	chr7	+	1082	5	FSM	ENSG00000234456.10	ENST00000414797.6	1082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.08972473588517	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGATGATGTGTGTC	79453903	True	NA	NA	False	AATAAA	-29	NA	79453949	79471208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79454245_79454885_79455008_79458846_79459000_79470593_79470680_79470782
transcript_130614.known	chr7	+	846	4	FSM	ENSG00000234456.10	ENST00000426835.6	846	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGTGTGAGTGTGATGA	NA	False	NA	NA	False	AATAAA	-21	NA	79453002	79471200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79453192_79458846_79459000_79470593_79470680_79470782
transcript_130615.known	chr7	+	5040	4	FSM	ENSG00000234456.10	ENST00000669576.1	5040	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAGCTAAATAAAAGA	79453824	False	NA	NA	False	NA	NA	NA	79453850	79463906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79454245_79454885_79455008_79458846_79459000_79459535
transcript_130617.known	chr7	+	4834	3	FSM	ENSG00000234456.10	ENST00000429408.6	4834	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAAAAGCTAAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	79452881	79463906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79453192_79458846_79459000_79459535
transcript_130618.known	chr7	+	676	4	FSM	ENSG00000234456.10	ENST00000655337.2	679	4	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTCTCAGTGTGAGTG	79453604	False	NA	NA	False	AATAAA	-15	NA	79453630	79471194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_79453656_79458846_79459000_79470593_79470680_79470782
transcript_130619.known	chr7	+	10083	8	FSM	ENSG00000127955.17	ENST00000649796.2	10083	8	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_5	34.2904758598343	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCCATATTATTTTT	80129562	True	NA	NA	False	AATAAA	-18	NA	80134830	80226181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_80135279_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_13062.known	chr1	+	1059	6	FSM	ENSG00000116161.18	ENST00000405362.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	1223.10146758149	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTAAAGTCGTTTTGGG	175000111	False	NA	NA	False	NA	NA	NA	175000212	175010079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_175000600_175004613_175004834_175006744_175006842_175007097_175007198_175008608_175008707_175009922
transcript_130622.known	chr7	+	1939	8	FSM	ENSG00000127955.17	ENST00000649214.1	1939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.288322368055	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAACATTGCACAGACT	80129583	True	NA	0	True	AATAAA	-11	NA	80134851	80218032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_80135279_80188924_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_130623.known	chr7	+	3237	8	FSM	ENSG00000127955.17	ENST00000649922.1	3237	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.288322368055	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTTAATAAATCCTAATA	80129584	True	NA	-24	True	AATGAA	-25	NA	80134852	80219362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_80135274_80188950_80188994_80189089_80189232_80199224_80199383_80203703_80203833_80210968_80211099_80212715_80212870_80217302
transcript_130625.known	chr7	-	4874	18	FSM	ENSG00000075223.14	ENST00000265361.8	4874	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	3.2165230857629	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTTTCTAGCTTTTAT	-80918723	True	NA	-3	True	AATAAA	-18	NA	80919051	80742537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_80745308_80748897_80749029_80751268_80751337_80758330_80758489_80761615_80761658_80765154_80765244_80789305_80789529_80798091_80798237_80800756_80800827_80802664_80802780_80804105_80804249_80805638_80805759_80810610_80810702_80818298_80818419_80827424_80827488_80828584_80828746_80916678_80916820_80918827
transcript_130629.nnic	chr7	-	839	4	NNC	ENSG00000153956.16	novel	7542	39	NA	NA	134	-182685	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	32.5371582450998	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGATAGTGAAGTGAAGAC	-82443570	False	NA	NA	False	AATAAA	-17	NA	82443581	82299728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_82300152_82335134_82335252_82349567_82349650_82443364
transcript_130639.nnic	chr7	+	982	2	Antisense	novelGene_ENSG00000170381.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	129	junction_1	0	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	83459825	False	NA	24	True	AATAAA	-22	NA	83459837	83465347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_83460267_83464794
transcript_130644.known	chr7	-	2675	17	FSM	ENSG00000170381.14	ENST00000642232.1	2675	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.1567140747936	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGACGCATCATTAAAATG	-83648525	False	NA	NA	False	ATTAAA	-36	NA	83648550	83371495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_83372288_83385293_83385434_83386982_83387051_83392554_83392722_83394296_83394339_83396637_83396730_83400027_83400251_83402631_83402777_83405449_83405520_83405944_83406060_83407096_83407240_83408367_83408488_83418389_83418484_83466481_83466602_83469242_83469303_83490113_83490275_83648427
transcript_130648.known	chr7	-	8113	17	FSM	ENSG00000075213.11	ENST00000265362.9	8113	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_15	14.9330537315714	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTTGTGTAGCTCAGT	-84194708	False	NA	NA	False	AGTAAA	-20	NA	84194789	83955776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_83961827_83963204_83963348_83977131_83977197_83981320_83981479_83985435_83985478_84001954_84002047_84005338_84005559_84007352_84007498_84011021_84011092_84011182_84011298_84014208_84014352_84046323_84046444_84060464_84060559_84110469_84110590_84129122_84129186_84134793_84134952_84194474
transcript_130654.known	chr7	-	553	5	FSM	ENSG00000075213.11	ENST00000420047.1	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	59.8806103843306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGGTAACGCTGGCTTT	-84195080	False	NA	NA	False	GGGGCT	-40	NA	84195161	84110475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_84110590_84129122_84129186_84134793_84134952_84194474_84194669_84195137
transcript_130661.known	chr7	-	1605	10	FSM	ENSG00000153993.14	ENST00000444867.1	1605	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.72618758808562	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGAAACAGTTAATATCT	-85186582	True	NA	NA	False	NA	NA	NA	85186855	85050356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_85050751_85055716_85055860_85065423_85065553_85068190_85068285_85072961_85073082_85081516_85081580_85097804_85097966_85121740_85121932_85153607_85153740_85186677
transcript_130678.known	chr7	+	3702	18	FSM	ENSG00000135164.19	ENST00000331242.12	3702	18	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_9	38.2007989191625	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAAGATTTGTTTTTAC	87148797	True	NA	13	True	AATAAA	-17	NA	87152452	87196325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87188091_87188302_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_130687.nic	chr7	-	1405	5	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_4	208.556946659659	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215860	True	NA	-2	True	AATAAA	-20	NA	87220573	87196159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220216
transcript_130688.known	chr7	-	1273	5	FSM	ENSG00000135185.12	ENST00000433078.5	1273	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_4	84.2778143997577	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTTTTTTCTTGACTT	-87215874	True	NA	-4	True	AATAAA	-18	NA	87220587	87196161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220360
transcript_130690.nnic	chr7	-	1124	5	NNC	ENSG00000135185.12	novel	1273	5	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_4	205.996965997075	208	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	NA	False	NA	-2	True	AATAAA	-20	NA	87220599	87196159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425_87219719_87220523
transcript_130694.nnic	chr7	-	973	4	NIC	ENSG00000135185.12	novel	1273	5	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_3	239.334261836639	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215865	True	NA	-2	True	AATAAA	-20	NA	87220578	87196159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_87196759_87197940_87198046_87199006_87199058_87220360
transcript_130702.known	chr7	-	769	2	FSM	ENSG00000224046.3	ENST00000433446.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTGATAACTT	-87151924	True	NA	-3	True	AATAAA	-15	NA	87152282	87151422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87151659_87151749
transcript_130703.known	chr7	-	338	2	FSM	ENSG00000224046.3	ENST00000446309.1	338	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTCAGAAGCAGCATTT	-87152385	False	NA	-20	True	NA	NA	NA	87152420	87151439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87151659_87152301
transcript_130704.known	chr7	+	3548	17	FSM	ENSG00000135164.19	ENST00000413276.6	3548	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	60.0373581613981	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTACATAGCCTTTTGC	87148753	True	NA	25	True	AATAAA	-29	NA	87152408	87196337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87152556_87163494_87163618_87164933_87165051_87166482_87166606_87170994_87171090_87173534_87173650_87174592_87174670_87179544_87179703_87181308_87181342_87182227_87182338_87184396_87184626_87185828_87185981_87190944_87191028_87193197_87193354_87193724_87194103_87194683_87194829_87195030
transcript_130705.known	chr7	-	1062	4	FSM	ENSG00000135185.12	ENST00000257637.8	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_3	40.8357142163028	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTTTTTCTTGACTTTT	-87215019	False	4713	-2	True	AATAAA	-20	NA	87219732	87196159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87196759_87197940_87198046_87199006_87199058_87219425
transcript_130717.known	chr7	-	1422	4	FSM	ENSG00000182165.19	ENST00000416560.7	1447	4	25	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	35.0269737329517	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTCTCTCTGGTTC	-87343629	True	NA	NA	False	AATAAA	-15	NA	87345515	87324586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345042_87345234_87345304
transcript_130721.known	chr7	-	526	3	FSM	ENSG00000182165.19	ENST00000432193.7	561	3	32	3	2	2	multi-exon	FALSE	canonical	1	6	junction_2	47.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCTGAGTCCTAATT	-87343616	True	NA	-3	True	AATAAA	-18	NA	87345502	87325349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345233
transcript_130722.known	chr7	-	1241	3	FSM	ENSG00000182165.19	ENST00000421293.3	1265	3	24	0	6	0	multi-exon	FALSE	canonical	3	44	junction_2	28.5	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTATTTGTTTCTCTCTGG	-87343642	True	NA	NA	False	AATAAA	-12	NA	87345528	87324589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341522_87341685_87345304
transcript_130726.known	chr7	-	849	3	FSM	ENSG00000182165.19	ENST00000610086.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGAGTCCTAATTTTG	-87343577	True	NA	0	True	AATAAA	-21	NA	87345463	87325346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87325445_87341354_87341685_87345042
transcript_130728.known	chr7	+	1213	4	FSM	ENSG00000005469.12	ENST00000412227.6	1213	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	4.49691252107735	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTATCTGTATC	87345190	True	NA	NA	False	ATTAAA	-20	NA	87345692	87360116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205
transcript_130732.known	chr7	+	3205	18	FSM	ENSG00000005469.12	ENST00000331536.8	3205	18	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	9.28666864558394	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCTGGTGCTTTTTGA	87345161	True	NA	5	True	AATAAA	-17	NA	87345663	87399794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87345768_87346339_87346431_87349047_87349184_87359205_87359331_87361389_87361572_87361727_87361853_87369375_87369485_87375631_87375726_87375827_87375954_87377348_87377451_87381909_87381994_87382073_87382182_87382412_87382544_87391588_87391713_87392565_87392645_87392729_87392824_87392947_87393068_87398523
transcript_130733.known	chr7	-	4020	28	FSM	ENSG00000005471.19	ENST00000265723.8	4020	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_26	3.03115962453483	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATCTGACTTGTAAAAT	-87475727	False	NA	NA	False	AATAAA	-18	NA	87475739	87402048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87402303_87403134_87403282_87406287_87406516_87408036_87408235_87409235_87409393_87411892_87412034_87413616_87413718_87417311_87417516_87418536_87418621_87419997_87420076_87422120_87422226_87423905_87424053_87426749_87426921_87431403_87431566_87439666_87439838_87440198_87440403_87443318_87443445_87443662_87443774_87444861_87444976_87447033_87447206_87449967_87450093_87451622_87451795_87452943_87453136_87454534_87454593_87462757_87462909_87472620_87472676_87475385_87475472_87475633
transcript_130734.known	chr7	+	2064	11	FSM	ENSG00000105784.16	ENST00000394654.4	4063	11	217	1782	161	58	multi-exon	FALSE	canonical	1	1	junction_2	2.41660919471891	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAATAACGGGAAAGTT	87628568	False	NA	NA	False	TTTAAA	-8	NA	87628614	87830514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87628946_87650821_87650938_87700420_87700555_87710569_87710656_87739790_87739881_87741498_87741580_87770580_87770750_87777797_87777956_87807372_87807520_87816140_87816263_87829884
transcript_130743.known	chr7	+	2342	12	FSM	ENSG00000006634.8	ENST00000431138.5	2342	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	96.5414311779367	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATATATGTTCGTAATT	87871277	False	NA	33	True	AATAAA	-24	NA	87876533	87908373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878134_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_130746.known	chr7	+	3655	12	FSM	ENSG00000006634.8	ENST00000265728.6	3655	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	36.454432101388	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTTTCCATTGTAAATT	87871236	True	NA	NA	False	AATAAA	-28	NA	87876492	87909553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291_87904417_87907187
transcript_130748.known	chr7	+	2694	12	FSM	ENSG00000006634.8	ENST00000413643.5	2694	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	102.745774681376	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	87876190	True	NA	36	True	AATAAA	-27	NA	87876215	87908376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900281_87900350_87900763_87900879_87904291_87904417_87907187
transcript_130750.known	chr7	-	4056	12	FSM	ENSG00000075303.13	ENST00000341119.10	4056	12	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_10	7.31126155013931	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTAATCTGTCAACATTT	-87874552	True	NA	-13	True	AATAAA	-18	NA	87876360	87833567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_87836362_87836729_87836811_87841632_87841715_87843753_87843864_87846948_87847123_87847852_87847978_87849880_87849949_87854203_87854311_87856291_87856352_87858630_87858752_87860571_87860641_87876095
transcript_130759.nic	chr7	+	1364	11	ISM	ENSG00000006634.8	ENST00000265728.6	3655	12	-76	5138	-70	-2804	5prime_fragment	FALSE	canonical	3	273	junction_2	38.0973752376722	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAATTAGTTTTATCAACC	87876358	False	NA	NA	False	AAAAAG	-5	NA	87876416	87904415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87904291
transcript_130760.nnic	chr7	+	2429	11	NIC	ENSG00000006634.8	novel	2694	12	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	3	46	junction_10	100.400996010996	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATATGTTCGTAATTGTT	87876358	False	NA	36	True	AATAAA	-27	NA	87876416	87908376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_87876779_87878052_87878226_87884978_87885159_87886843_87886895_87887328_87887399_87887982_87888060_87896473_87896511_87897293_87897340_87900220_87900350_87900763_87900879_87907187
transcript_130777.known	chr7	-	1972	8	FSM	ENSG00000075142.14	ENST00000265729.7	1972	8	0	0	0	0	multi-exon	TRUE	canonical	3	2409	junction_3	183.184528354802	3317	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTAGCCTCATTTCACTA	-88191010	True	NA	-5	True	AATAAA	-17	NA	88220038	88205114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_88206505_88208506_88208566_88209338_88209453_88209982_88210131_88210881_88210926_88217121_88217192_88218858_88218943_88219975
transcript_130778.known	chr7	+	442	3	FSM	ENSG00000235436.11	ENST00000479881.1	442	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTTTCTTCTTCTAACGA	NA	False	NA	NA	False	NA	NA	NA	90119538	90124163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90119866_90122066_90122092_90124073
transcript_13078.known	chr1	-	910	3	FSM	ENSG00000120333.4	ENST00000367677.3	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	517	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCCCCTTAACTATT	-175014741	True	NA	-49	True	NA	NA	NA	175023415	175014244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175014852_175018417_175018577_175023271
transcript_130783.known	chr7	+	1219	5	FSM	ENSG00000164647.9	ENST00000297205.7	1219	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	3.16227766016838	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGATGTTTCTCTTTGTA	90153870	True	NA	6	True	AATAAA	-16	NA	90154468	90164827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913_90162079_90164476
transcript_130784.known	chr7	+	1054	4	FSM	ENSG00000164647.9	ENST00000475789.1	1054	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2.49443825784929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACAAGTGTTTCCTAGACA	90153857	True	NA	NA	False	NA	NA	NA	90154455	90162251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90154544_90159757_90159873_90160804_90161318_90161913
transcript_130785.known	chr7	+	6612	6	FSM	ENSG00000157214.14	ENST00000394622.6	6612	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.0259831219344	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTACTATTTAATGATT	90211532	True	NA	-12	True	TATAAA	-11	NA	90211859	90237594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90211935_90212275_90212337_90225049_90225575_90226970_90227499_90229871_90230037_90232336
transcript_130788.nic	chr7	+	1470	2	ISM	ENSG00000105792.19	ENST00000485791.5	543	4	-3	8828	-3	-8828	5prime_fragment	FALSE	canonical	3	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTAAGTGGGTTGA	90244941	True	NA	NA	False	TATAAA	-14	NA	90245191	90256539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_90245545_90255422
transcript_130789.nic	chr7	+	783	9	NIC	ENSG00000157224.16	novel	527	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	108.773560666184	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	90397703	True	NA	NA	False	ATTAAA	-15	NA	90403436	90513383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_90403550_90405518_90405609_90466409_90466514_90479227_90479275_90487326_90487421_90488870_90488965_90492238_90492310_90494366_90494431_90513277
transcript_130798.nic	chr7	+	524	6	NIC	ENSG00000157224.16	novel	338	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	130.909739897381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	90397703	True	NA	NA	False	ATTAAA	-15	NA	90403436	90513383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_90403550_90405518_90405609_90466409_90466514_90479227_90479275_90494366_90494431_90513277
transcript_130799.known	chr7	+	338	5	FSM	ENSG00000157224.16	ENST00000483862.5	338	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	142.03344676519	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATTACTTTTACATTAT	90397785	True	NA	NA	False	ATTAAA	-15	NA	90403518	90513383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405609_90479227_90479275_90494366_90494431_90513277
transcript_130800.known	chr7	+	342	3	FSM	ENSG00000157224.16	ENST00000498326.5	342	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	164	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTATACTACTTTTGTTT	90397802	True	NA	NA	False	NA	NA	NA	90403535	90409184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405609_90408946
transcript_130801.known	chr7	+	3488	3	FSM	ENSG00000157224.16	ENST00000394605.2	3488	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	136	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397733	True	NA	32	True	ATTAAA	-17	NA	90403466	90415954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405613_90412643
transcript_130802.known	chr7	+	309	4	FSM	ENSG00000157224.16	ENST00000485696.1	309	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCGAGTATTTCATTA	NA	False	NA	NA	False	ATTAAA	-3	NA	90466409	90513371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90466514_90479227_90479275_90494366_90494431_90513277
transcript_130803.known	chr7	+	3533	4	FSM	ENSG00000157224.16	ENST00000496677.6	3533	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	148.963828569966	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCTGCTTCTGTTTTTTT	90397727	True	NA	32	True	ATTAAA	-17	NA	90403460	90415954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90403550_90405518_90405609_90412006_90412050_90412643
transcript_130806.known	chr7	+	7489	10	FSM	ENSG00000105793.16	ENST00000222511.11	7489	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	16.4976616375222	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCTCTCGAAATATCTT	90344530	True	NA	2	True	AATAAA	-17	NA	90346715	90391453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_130807.nic	chr7	+	1222	9	NIC	ENSG00000105793.16	novel	7489	10	NA	NA	-24	109	combination_of_known_junctions	TRUE	canonical	2	3	junction_4	38.3951494332292	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATGCTTAAAAACAAGG	90344455	True	NA	17	True	ATTAAA	-22	NA	90346640	90385185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_90346775_90352815_90353010_90354457_90354550_90355085_90355231_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_130808.known	chr7	+	6913	9	FSM	ENSG00000105793.16	ENST00000380058.7	6913	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	38.2557185267771	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCTAGTCAAGTGAATTC	90344521	True	NA	6	True	AATAAA	-2	NA	90346706	90391013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_130810.known	chr7	+	775	8	FSM	ENSG00000105793.16	ENST00000417207.5	775	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	41.5363131021814	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGTTCCAACATATCATCC	90344509	True	NA	NA	False	AAAACA	-20	NA	90346694	90384937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90354457_90354550_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_130812.known	chr7	+	1740	8	FSM	ENSG00000105793.16	ENST00000257659.12	1740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.8422694198592	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACTAAAAATATAAAAAATTA	90344479	True	NA	NA	False	NA	NA	NA	90346664	90385890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_90346775_90352815_90353010_90372154_90372229_90374301_90374355_90377506_90377615_90378133_90378212_90382955_90383080_90384891
transcript_130817.known	chr7	-	450	3	FSM	ENSG00000223969.7	ENST00000441971.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	-90595856	False	54	-2	True	AATAAA	-14	NA	90595890	90590622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_90590729_90591715_90591902_90595732
transcript_130818.known	chr7	-	449	3	FSM	ENSG00000223969.7	ENST00000412669.2	497	3	45	3	45	0	multi-exon	FALSE	canonical	3	8	junction_2	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTGTGGAATCATTGCT	-90597319	False	NA	-2	True	AATAAA	-14	NA	90597353	90590622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_90590729_90591715_90591902_90597196
transcript_13082.known	chr1	+	804	5	FSM	ENSG00000116161.18	ENST00000473925.1	804	5	0	0	0	0	multi-exon	FALSE	canonical	3	2912	junction_4	121.727153913989	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATTTTTAATAGTTT	174950669	True	NA	NA	False	TTTAAA	-24	NA	174999954	175008754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_175000196_175004613_175004834_175006744_175006842_175007097_175007198_175008608
transcript_130822.nnic	chr7	-	611	5	NNC	ENSG00000127989.14	novel	380	5	NA	NA	-44	69938	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	68.41966091702	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	NA	False	NA	NA	False	AATAAA	-28	NA	91880746	91800990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_91801269_91802481_91802600_91827414_91827481_91880054_91880114_91880656
transcript_130825.nnic	chr7	-	482	4	NNC	ENSG00000127989.14	novel	380	5	NA	NA	-44	69927	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	73.3136337176714	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACCCTCCACTTGTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	91880746	91801001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_91801269_91827414_91827481_91880054_91880114_91880656
transcript_130826.known	chr7	-	581	4	FSM	ENSG00000127989.14	ENST00000456229.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	70.0729778318449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGTTCTCCTGAATCCT	-91878821	True	NA	NA	False	NA	NA	NA	91880679	91874314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_91874765_91876877_91876927_91880054_91880114_91880656
transcript_130827.known	chr7	-	1639	4	FSM	ENSG00000127989.14	ENST00000406735.6	1639	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	66.9593574906118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAATGAAGGGGGCCTGT	-91878834	True	NA	NA	False	NA	NA	NA	91880692	91873321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_91874765_91876877_91876979_91880054_91880114_91880656
transcript_13083.known	chr1	-	2115	3	FSM	ENSG00000120333.4	ENST00000476371.1	2115	3	0	0	0	0	multi-exon	FALSE	canonical	3	991	junction_2	62.5	2901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTTGGTATTATTAAGAG	-175014751	True	NA	0	True	ATTAAA	-14	NA	175023425	175012957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175014852_175018417_175018577_175023363
transcript_130830.nnic	chr7	-	427	3	NNC	ENSG00000127989.14	novel	380	5	NA	NA	-44	69938	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	78	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	NA	False	NA	NA	False	AATAAA	-28	NA	91880746	91800990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_91801269_91880054_91880114_91880656
transcript_130831.known	chr7	-	554	3	FSM	ENSG00000127989.14	ENST00000442961.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	79	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAACGTTCTCCTGAAT	-91878832	True	NA	NA	False	NA	NA	NA	91880690	91874317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_91874765_91880054_91880114_91880642
transcript_130832.known	chr7	-	3882	2	FSM	ENSG00000127989.14	ENST00000419292.1	3882	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGCCGGCCATAGTGGTGC	-91878844	True	NA	NA	False	NA	NA	NA	91880702	91870928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_91874765_91880656
transcript_13084.known	chr1	-	4548	4	FSM	ENSG00000235750.10	ENST00000423313.6	4548	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	4.18993502999218	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGTCTGCCATATTTCT	-175191525	True	NA	0	True	AATAAA	-21	NA	175192776	175156985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175161147_175166561_175166738_175177610_175177685_175192639
transcript_130842.nic	chr7	+	1237	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-45	69926	-7	4835	5prime_fragment	FALSE	canonical	3	26	junction_6	3.79580864445326	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACAGGAAAAGGAGACAATC	91938020	True	NA	NA	False	AATAAA	-8	NA	91940832	92000887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_130845.nic	chr7	+	2507	8	ISM	ENSG00000127914.19	ENST00000680074.1	10080	26	-77	68688	-39	6073	5prime_fragment	TRUE	canonical	3	26	junction_6	3.79580864445326	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGGGTACACTTGAACA	91940770	False	NA	24	True	AAAAAG	-30	NA	91940800	92002125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602_91995801_92000847
transcript_130846.known	chr7	+	1356	7	FSM	ENSG00000127914.19	ENST00000394564.5	1356	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	3.49602949390051	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTGTCATTTATAA	91938113	True	NA	NA	False	AATACA	-15	NA	91940925	91996052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620_91994777_91995602
transcript_130851.nic	chr7	+	913	6	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-77	1346	9	-1346	5prime_fragment	FALSE	canonical	3	28	junction_3	2.63818119165458	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGATGAGACAATGAGAGAAT	91938036	True	NA	NA	False	NA	NA	NA	91940848	91994706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710_91973969_91980288_91980334_91992157_91992212_91992884_91993056_91994620
transcript_130856.nic	chr7	+	550	2	ISM	ENSG00000127914.19	ENST00000394564.5	1356	7	-260	22274	-174	-22274	5prime_fragment	FALSE	canonical	3	34	junction_1	0	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAAAACGTCAAGCAGTA	91940635	False	NA	25	True	NA	NA	NA	91940665	91973778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_91941148_91973710
transcript_130857.known	chr7	-	2642	18	ISM	ENSG00000289027.1	ENST00000692281.1	5370	26	0	19598	0	-19598	5prime_fragment	FALSE	canonical	0	0	junction_1	32.7792237347152	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTCTTCCAAATAATTA	-92243244	True	NA	NA	False	NA	NA	NA	92245924	92131773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92131873_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245135_92245789
transcript_130858.known	chr7	-	1729	10	FSM	ENSG00000001630.18	ENST00000450723.5	1729	10	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_9	230.758866180668	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATCTAGGTAATTGGC	-92134792	False	NA	63	True	NA	NA	NA	92134803	92113411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134665
transcript_130864.known	chr7	-	3155	10	FSM	ENSG00000001630.18	ENST00000003100.13	3155	10	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_9	72.5260276821916	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTCTGTATTCATGAAT	-92119143	True	NA	NA	False	ATTAAA	-17	NA	92134477	92112152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92113844_92117043_92117213_92118519_92118616_92123119_92123316_92123733_92123854_92126252_92126428_92127504_92127632_92128879_92129057_92131773_92131873_92134172
transcript_130866.known	chr7	-	4079	19	FSM	ENSG00000001631.17	ENST00000394505.7	4079	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	26.6843112921395	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGAGATATAGTCATAT	-92243234	True	NA	-22	True	AATAAA	-19	NA	92245914	92199412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234448_92234593_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244001_92244150_92244901_92245172_92245789
transcript_13088.known	chr1	-	2485	3	FSM	ENSG00000235750.10	ENST00000545251.6	2485	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTCACTTGGGCTGCTT	-175191503	True	NA	NA	False	ATTAAA	-17	NA	175192754	175158952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_175161147_175166561_175166738_175192639
transcript_130890.known	chr7	-	2827	17	FSM	ENSG00000001631.17	ENST00000394503.6	2827	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	36.1480787006723	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTACT	-92243234	True	NA	NA	False	NA	NA	NA	92245914	92200372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92200805_92201306_92201424_92213194_92213402_92213891_92213980_92214610_92214778_92221901_92222054_92222821_92222979_92225719_92225828_92226525_92226683_92234807_92234924_92235402_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92244901_92245172_92245789
transcript_130891.known	chr7	-	855	7	ISM	ENSG00000001631.17	ENST00000690529.1	3829	18	0	36159	0	665	5prime_fragment	FALSE	canonical	0	0	junction_5	37.2174540892964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAAAAACTAATGTCATA	-92243240	True	NA	NA	False	NA	NA	NA	92245920	92235578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92235647_92236412_92236543_92237666_92237760_92240992_92241153_92242033_92242138_92245426_92245596_92245789
transcript_130894.known	chr7	-	665	3	ISM	ENSG00000001631.17	ENST00000452773.6	324	4	11	-21	-1	21	intron_retention	FALSE	canonical	0	0	junction_2	33	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGCAACAGTGAAATAAC	-92243235	True	NA	NA	False	AAAAAG	-31	NA	92245915	92241080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92241153_92242033_92242138_92245426
transcript_130898.known	chr7	-	4369	24	FSM	ENSG00000127980.16	ENST00000248633.9	4369	24	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_11	21.2243395607981	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTATCTGTTCTTTGT	-92525361	True	NA	-7	True	AATAAA	-20	NA	92528520	92487024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_130900.known	chr7	-	3329	21	FSM	ENSG00000127980.16	ENST00000438045.5	3329	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_19	37.9552367928327	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTTCTTTGTATATC	-92525282	True	NA	-2	True	AATAAA	-25	NA	92528441	92487019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92487542_92489292_92489424_92489713_92489912_92491271_92491503_92492952_92493130_92494292_92494397_92494486_92494630_92496712_92496778_92499703_92499839_92501506_92501674_92501889_92502080_92503040_92503196_92504731_92504903_92506247_92506345_92506993_92507127_92509328_92509412_92510943_92511048_92511579_92511704_92513847_92513968_92522101_92522246_92528306
transcript_130901.nic	chr7	-	1790	8	ISM	ENSG00000127980.16	ENST00000428214.5	3681	23	-124	23408	-39	0	5prime_fragment	FALSE	canonical	3	117	junction_4	14.2799988566855	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTGCATTGTGAAGTGT	-92525400	True	NA	NA	False	AATAAA	-19	NA	92528559	92510864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92511048_92511579_92511704_92513847_92513968_92517275_92518043_92518140_92518256_92518994_92519079_92522101_92522246_92528306
transcript_130906.known	chr7	+	4571	5	FSM	ENSG00000157259.8	ENST00000287957.5	4571	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	9.75961064797157	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAACCATTCCAGTTCC	92445430	True	NA	NA	False	AATAAA	-29	NA	92447481	92460075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92447979_92448751_92448878_92450700_92450761_92454501_92454686_92456371
transcript_130908.known	chr7	+	1716	6	FSM	ENSG00000157259.8	ENST00000645746.1	1716	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	49.8822613761646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCTCCAGCCTGGGCAA	92445451	True	NA	NA	False	NA	NA	NA	92447502	92457119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92447979_92448751_92448878_92449091_92449214_92450700_92450761_92454501_92454686_92456371
transcript_130923.known	chr7	+	4667	5	FSM	ENSG00000127993.16	ENST00000265732.10	4667	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	21.7600551469889	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATACATAAAAAATTATTTA	92527468	True	NA	NA	False	AATAAA	-26	NA	92528794	92540481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401_92534971_92536850
transcript_130925.nic	chr7	+	1944	3	ISM	ENSG00000127993.16	ENST00000481551.5	4093	4	-23	4024	-23	1431	5prime_fragment	FALSE	canonical	3	149	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACCTTTCTATATA	NA	False	NA	NA	False	NA	NA	NA	92528749	92533981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_92528925_92529475_92529667_92532403
transcript_130926.known	chr7	+	4093	4	FSM	ENSG00000127993.16	ENST00000481551.5	4093	4	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	23.3285709425636	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACCGTGGTGTGTTGTTTTC	92527446	True	NA	19	True	GATAAA	-20	NA	92528772	92538005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92528925_92529475_92529667_92532403_92532550_92534401
transcript_130927.known	chr7	-	2434	12	FSM	ENSG00000234545.8	ENST00000438306.5	2434	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	274.835758617535	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTGTTCTTATCAGCT	-92587131	True	NA	-16	True	AATAAA	-20	NA	92590393	92560792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92585297_92585397_92590267
transcript_130931.known	chr7	-	1890	11	FSM	ENSG00000234545.8	ENST00000415397.6	1890	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	261.696484500652	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAGAATCTTAGTAAAT	-92587067	True	NA	-124	True	NA	NA	NA	92590329	92561136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566009_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577677_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_130932.known	chr7	-	931	11	FSM	ENSG00000234545.8	ENST00000427372.5	931	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	261.572188888651	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTAAGAAAAATCAGGATT	-92586808	False	3262	NA	False	AAAAAG	-34	NA	92590070	92562281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92589859
transcript_130933.known	chr7	-	2367	11	FSM	ENSG00000234545.8	ENST00000445716.6	2367	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	232.249025832187	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAACTTACAAAGATAAAC	-92587128	True	NA	19	True	NA	NA	NA	92590390	92560757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92566013_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_130950.nic	chr7	-	747	10	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-27	5292	-24	0	5prime_fragment	FALSE	canonical	3	204	junction_1	176.543353189962	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGCAGTGAAGA	-92587155	False	NA	-41	True	TTTAAA	-21	NA	92590417	92566049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92566062_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_130958.nic	chr7	-	737	9	ISM	ENSG00000234545.8	ENST00000445716.6	2367	11	-27	9063	-24	-279	5prime_fragment	FALSE	canonical	3	305	junction_4	139.757323153386	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATATGATCAAATCCAT	-92587155	False	NA	NA	False	NA	NA	NA	92590417	92569820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92569916_92575770_92575822_92577102_92577196_92577654_92577718_92578149_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_130970.nic	chr7	-	402	4	ISM	ENSG00000234545.8	ENST00000481407.5	2293	9	-27	17103	-24	0	5prime_fragment	FALSE	canonical	3	582	junction_1	46.0169051062276	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATACCACTTTTAGTTTA	-92587155	False	NA	0	True	AAAAAG	-5	NA	92590417	92578318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_92578394_92579316_92579396_92581505_92581604_92590267
transcript_130971.known	chr7	-	2293	9	FSM	ENSG00000234545.8	ENST00000481407.5	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	215.1916297164	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAACGGCTTCA	-92587128	True	NA	NA	False	AAAAAG	-14	NA	92590390	92561215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92562369_92569822_92569916_92575770_92575822_92577102_92577196_92577654_92578183_92578318_92578394_92579316_92579396_92581505_92581604_92590267
transcript_130973.known	chr7	-	11663	8	FSM	ENSG00000105810.10	ENST00000424848.3	11663	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	10.9264703862703	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTTTTTCTTTCTTT	-92834945	True	NA	2	True	ATTAAA	-19	NA	92836573	92604920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_92615287_92618071_92618208_92623035_92623087_92671425_92671536_92725625_92725794_92774695_92774832_92833090_92833691_92836477
transcript_13098.known	chr1	-	2329	2	FSM	ENSG00000224687.2	ENST00000421505.1	2329	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGTAGAATGATTTAT	-178093931	True	NA	-10	True	AATAAA	-19	NA	178093984	178091507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_178093413_178093560
transcript_130981.known	chr7	+	407	3	FSM	ENSG00000237819.6	ENST00000686356.1	593	3	122	64	2	-51	multi-exon	FALSE	canonical	0	0	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAAAGCTGCCACACCG	92836356	True	NA	-56	True	ATTAAA	-3	NA	92836488	92917123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92836564_92854908_92854954_92916836
transcript_130983.nic	chr7	+	599	3	FSM	ENSG00000237819.6	ENST00000452050.6	520	3	-116	37	4	-23	multi-exon	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCTCCTTCACATTAAAG	92836238	True	NA	-28	True	ATTAAA	-31	NA	92836370	92917151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92836564_92854908_92855000_92916836
transcript_130987.nnic	chr7	+	621	3	NIC	ENSG00000237819.6	novel	591	4	NA	NA	-9	-5	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTTTGCTGTGATCT	92836247	True	NA	3	True	ATTAAA	-13	NA	92836379	92917182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_92836564_92905729_92905821_92916836
transcript_130989.known	chr7	+	432	2	FSM	ENSG00000237819.6	ENST00000435695.2	433	2	1	0	1	0	multi-exon	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGCTGTGATCTTTTTT	92836350	True	NA	8	True	ATTAAA	-18	NA	92836482	92917187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_92836564_92916836
transcript_13099.known	chr1	-	300	2	FSM	ENSG00000224687.2	ENST00000452867.1	300	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGCAGTGTGTTGGC	-178093557	False	NA	-6	True	NA	NA	NA	178093572	178093149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_178093411_178093533
transcript_130991.known	chr7	+	5684	28	FSM	ENSG00000004766.17	ENST00000305866.10	5684	28	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.96099262902528	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGAATTGATGAATACAAG	93231380	True	NA	NA	False	AATAAA	-15	NA	93232365	93361123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164_93276306_93291702_93291836_93294544_93294637_93296741_93296837_93297144_93297244_93303459_93303551_93305827_93306005_93308823_93308943_93311165_93311273_93323610_93323733_93334116_93334198_93341426_93341576_93348710_93348808_93349874_93350034_93353639_93353762_93355890_93356081_93358316
transcript_130996.known	chr7	+	1193	12	FSM	ENSG00000004766.17	ENST00000251739.9	1193	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7.20422282042144	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTCTCCCAAGTTGT	93231354	True	NA	NA	False	AATAAA	-20	NA	93232339	93276428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93271219_93271263_93272634_93272734_93276164
transcript_130997.nnic	chr7	+	1061	10	NNC	ENSG00000004766.17	novel	1193	12	NA	NA	2	605	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_9	9.94428926011753	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGCATATTTTGCTAT	93231356	True	NA	NA	False	ATTAAA	-18	NA	93232341	93260177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93232501_93239865_93239935_93252652_93252776_93253859_93253932_93256508_93256563_93257393_93257465_93258158_93258277_93258356_93258393_93259549_93259633_93259901
transcript_13100.nnic	chr1	+	1029	7	NNC	ENSG00000075391.17	novel	9843	18	NA	NA	-57849	-14993	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	11.9953694769644	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAGAATAATTATGTAGG	178282979	True	NA	NA	False	AAAAAG	-10	NA	178283621	178442914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_178283814_178299991_178300119_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674
transcript_131005.nnic	chr7	-	965	3	Antisense	novelGene_ENSG00000225898.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	89	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCACCACAGCTCAAGGAG	NA	False	NA	NA	False	NA	NA	NA	93807661	93591266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_93591625_93793531_93793679_93807201
transcript_131011.nnic	chr7	-	934	3	Antisense	novelGene_ENSG00000225898.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAGCCGGGAAGCTCCA	NA	False	NA	NA	False	NA	NA	NA	93807661	93591296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_93591718_93793625_93793679_93807201
transcript_131013.nnic	chr7	+	976	3	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-264	-102204	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGAAAATACTTAGG	93590053	True	NA	NA	False	NA	NA	NA	93591308	93807655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93591772_93736604_93736666_93807203
transcript_131016.nnic	chr7	+	904	3	NNC	ENSG00000127928.13	novel	538	2	NA	NA	-113306	89	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTTTTATAAATGATTC	NA	False	NA	NA	False	AATAAA	-27	NA	93793260	93911164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93793683_93906735_93906843_93910789
transcript_131017.nnic	chr7	+	1208	2	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-558	-102205	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	0	71	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAAAATACTTAG	NA	False	NA	NA	False	NA	NA	NA	93591014	93807654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93591772_93807203
transcript_131018.nnic	chr7	+	818	2	NNC	ENSG00000127928.13	novel	1943	4	NA	NA	-275	-142460	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACTCTCAGATTGTAAT	93590042	True	NA	NA	False	TATAAA	-16	NA	93591297	93767399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_93591772_93767055
transcript_13102.known	chr1	+	14453	16	FSM	ENSG00000075391.17	ENST00000462775.5	14453	16	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	12.5273035140581	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGTGTGTGTGGAAGGTG	178341334	True	NA	NA	False	AATAAA	-17	NA	178341470	178484147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_178341609_178390099_178390207_178420510_178420621_178439421_178439576_178441548_178441648_178442674_178443230_178445517_178445663_178451570_178451716_178452415_178452653_178454446_178454649_178456699_178456900_178457682_178458545_178464277_178464413_178465919_178466123_178467333_178467422_178473074
transcript_131020.known	chr7	-	1144	5	FSM	ENSG00000105825.14	ENST00000650573.1	1144	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	26.7861904719577	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAACATATTTGAGAATAAAA	-93890290	True	NA	-55	True	AATATA	-13	NA	93890747	93886470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93886897_93887260_93887432_93889016_93889224_93890136_93890320_93890590
transcript_131026.known	chr7	-	583	4	FSM	ENSG00000105825.14	ENST00000647793.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	26.6207938774685	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCGCTATTATTTTAAT	-93890296	True	NA	NA	False	NA	NA	NA	93890753	93887380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93887432_93889034_93889221_93890136_93890320_93890590
transcript_13103.nnic	chr1	+	583	3	NIC	ENSG00000213057.5	novel	2577	3	NA	NA	-52	-287	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAGGTCCCTGTAATGAT	178542528	True	NA	NA	False	AATAAA	-18	NA	178542699	178548602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_178542886_178547093_178547164_178548275
transcript_131031.known	chr7	+	527	2	FSM	ENSG00000234695.1	ENST00000435257.1	527	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTAGCCCTTTTGTATCA	NA	False	NA	NA	False	AAAAAG	-13	NA	93890912	93893601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93891080_93893241
transcript_131032.known	chr7	+	3019	2	FSM	ENSG00000127920.6	ENST00000248564.6	3019	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTAGTGAGACTTAGGT	93921641	True	NA	NA	False	ATTAAA	-16	NA	93921734	93928610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_93922234_93926090
transcript_131036.known	chr7	-	1481	4	FSM	ENSG00000105829.13	ENST00000222547.8	1481	4	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	11.6714276000077	1409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTCTTTAAGTCTCTTT	-94000060	True	NA	-7	True	AATAAA	-19	NA	94004355	93993244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93994386_93996264_93996322_93999169_93999295_94004197
transcript_131037.known	chr7	-	1031	5	FSM	ENSG00000105829.13	ENST00000433727.5	1031	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	149.442923887349	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTCGACTGTGTTACT	-94000066	True	NA	-22	True	AATAAA	-4	NA	94004361	93993259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_93993911_93994351_93994386_93996264_93996322_93999169_93999295_94004197
transcript_131041.nnic	chr7	-	683	5	NIC	ENSG00000285090.1	novel	1026	9	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTCTCTTTTGGAG	NA	False	NA	NA	False	AGTAAA	-41	NA	94395633	94278679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_94278987_94279328_94279391_94307558_94307650_94391404_94391534_94395539
transcript_131046.nic	chr7	+	1184	2	ISM	ENSG00000164692.19	ENST00000297268.11	5072	52	-78	32581	-78	-18164	intron_retention	FALSE	canonical	1	43	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTTTTTATTCTGGAGA	94392535	True	NA	NA	False	AAAAAG	-1	NA	94394816	94398646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_94395102_94397747
transcript_131047.known	chr7	+	5072	52	FSM	ENSG00000164692.19	ENST00000297268.11	5072	52	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.1748466862604	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATTGAGTAAAATTCCTT	94392613	True	NA	NA	False	AATAAA	-45	NA	94394894	94431227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94395102_94397747_94397759_94398381_94398397_94399048_94399085_94400195_94400289_94401566_94401621_94404555_94404601_94404692_94404747_94404838_94404893_94405198_94405253_94405672_94405727_94406249_94406304_94407846_94407892_94408182_94408237_94408335_94408381_94408769_94408824_94409321_94409421_94409563_94409609_94409722_94409822_94410241_94410296_94410419_94410528_94410888_94410943_94411055_94411155_94412067_94412122_94412583_94412683_94413082_94413137_94413689_94413744_94413893_94413948_94414221_94414276_94415225_94415271_94416404_94416504_94417723_94417832_94418498_94418553_94419497_94419552_94420232_94420287_94420390_94420445_94420540_94420649_94421008_94421063_94421898_94421953_94422956_94423119_94424335_94424444_94425116_94425225_94425609_94425664_94425749_94425858_94425997_94426052_94426422_94426531_94427007_94427062_94427187_94427296_94427626_94427886_94428292_94428478_94429187_94429431_94430246
transcript_13105.nnic	chr1	+	760	4	Fusion	ENSG00000213057.5_ENSG00000273384.1	novel	2577	3	NA	NA	-52	2652	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTTCAGTCACTATTA	178542528	True	NA	NA	False	AATAAA	-23	NA	178542699	178654934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_178542886_178547093_178547164_178651706_178651904_178654627
transcript_131050.known	chr7	-	1646	13	FSM	ENSG00000127990.19	ENST00000642638.1	1646	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	88.4632299633896	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAATAATACAACATAACTT	-94652777	True	NA	NA	False	NA	NA	NA	94656127	94585365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94644605_94644668_94655989
transcript_131052.known	chr7	-	1733	12	FSM	ENSG00000127990.19	ENST00000646489.1	1733	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	79.682842393459	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	-94652790	True	NA	NA	False	AATAAA	-33	NA	94656140	94585229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94639340_94639449_94655989
transcript_131053.known	chr7	-	1686	12	FSM	ENSG00000127990.19	ENST00000646559.1	1686	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	77.1183484614491	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTTGATCTTTAAAATAA	-94652823	True	NA	NA	False	AAAACA	-27	NA	94656173	94585263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94644605_94644668_94655989
transcript_131056.known	chr7	-	1532	10	FSM	ENSG00000127990.19	ENST00000437425.7	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	62.845489540265	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGAAGCCTAATGACTGG	-94652827	True	NA	NA	False	AATAAA	-26	NA	94656177	94585236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94655989
transcript_131059.nnic	chr7	-	1107	7	NIC	ENSG00000127990.19	novel	1733	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	83.9000728380031	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTAATGACTGGTGAAATT	-94652825	True	NA	NA	False	AATAAA	-33	NA	94656175	94585229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94655989
transcript_131062.known	chr7	-	1868	11	FSM	ENSG00000127990.19	ENST00000648936.2	1868	11	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_4	24.7919341722263	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGGATTGTGAAACTG	-94652783	True	NA	NA	False	AATAAA	-6	NA	94656133	94584979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_131063.known	chr7	-	1713	12	FSM	ENSG00000127990.19	ENST00000644551.1	1713	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	81.9293184589039	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAAAGTTGATCTTTAA	-94652836	True	NA	NA	False	AAAACA	-22	NA	94656186	94585268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94622545_94622627_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_131064.known	chr7	-	1566	11	FSM	ENSG00000127990.19	ENST00000646098.1	1566	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	65.0323765519914	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTGATGACTTTATATT	-94652819	True	NA	NA	False	NA	NA	NA	94656169	94585293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618933_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_131065.known	chr7	-	1359	9	FSM	ENSG00000127990.19	ENST00000643206.1	1359	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	73.192276744203	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652798	True	NA	NA	False	AATAAA	-40	NA	94656148	94585222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94655989
transcript_131066.known	chr7	-	1704	12	FSM	ENSG00000127990.19	ENST00000445866.7	1704	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	81.1150595916811	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCTAATGACTGGTGAAA	-94652796	True	NA	NA	False	AATAAA	-31	NA	94656146	94585231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94597929_94598005_94598774_94598964_94599696_94599724_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_131067.known	chr7	-	1672	10	FSM	ENSG00000127990.19	ENST00000447873.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	68.8187815306114	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGGTGAAATTTACTTCA	-94652857	True	NA	NA	False	AATAAA	-40	NA	94656207	94585222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_94585516_94588688_94588733_94598774_94598964_94600645_94600858_94603289_94603453_94618757_94618957_94623324_94623398_94628201_94628360_94629718_94629842_94655989
transcript_131068.known	chr7	+	3931	18	FSM	ENSG00000127995.17	ENST00000297273.9	3931	18	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_9	19.4466709331089	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGATCCATTCATGATT	94509197	True	NA	39	True	ATTAAA	-24	NA	94509808	94557019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94510218_94517559_94517657_94518202_94518324_94527161_94527207_94528187_94528251_94533204_94533250_94533678_94533803_94535308_94535524_94537471_94537895_94538966_94539057_94544410_94544531_94545544_94545702_94547095_94547176_94549532_94549635_94551337_94551479_94552349_94552428_94554482_94554576_94555491
transcript_13107.nnic	chr1	+	823	3	Fusion	ENSG00000213057.5_ENSG00000273384.1	novel	2577	3	NA	NA	-52	-9	multi-exon	FALSE	canonical	0	0	junction_2	2.5	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCGTAAGCATGCTTGCA	178542528	True	NA	NA	False	CATAAA	-16	NA	178542699	178652273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_178542886_178547093_178547164_178651706
transcript_131071.known	chr7	+	6394	2	FSM	ENSG00000242265.6	ENST00000615790.5	6394	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTGTCCTGATCATTT	94656527	False	NA	25	True	AATAAA	-30	NA	94656545	94669692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94656581_94663333
transcript_131072.known	chr7	+	10547	20	FSM	ENSG00000158528.12	ENST00000433360.6	10547	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.54258257553717	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTTGAAGCAATTTTT	94906256	True	NA	13	True	AATAAA	-13	NA	94907593	95296400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_94907703_94909897_94911509_95111258_95111392_95120711_95120833_95161866_95161972_95198348_95198485_95203664_95203731_95225960_95226117_95247472_95247527_95250025_95250256_95251761_95251859_95251958_95252131_95268549_95268708_95269206_95269508_95273898_95273987_95274084_95274169_95284017_95284331_95286205_95286326_95288535_95288719_95290090
transcript_131073.known	chr7	-	1191	9	FSM	ENSG00000105852.11	ENST00000265627.10	1191	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.39194109070751	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGAGTGTGGCTTTTCT	-95396354	True	NA	NA	False	AGTAAA	-14	NA	95396375	95359871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95360132_95362361_95362491_95362759_95362842_95363862_95364064_95367361_95367489_95372172_95372339_95390153_95390210_95394643_95394715_95396276
transcript_131078.known	chr7	-	1726	9	FSM	ENSG00000105854.13	ENST00000433091.6	1726	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	90.6862723900371	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTAACTAAAATCCCAGT	NA	False	NA	NA	False	ATTAAA	-19	NA	95435198	95404879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_131079.nnic	chr7	-	1616	9	NNC	ENSG00000105854.13	novel	1610	9	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_6	97.8390738662218	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTGTGTTTAATTC	-95431805	True	NA	NA	False	ATTAAA	-37	NA	95435060	95404861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412452_95416241_95416298_95424514_95424586_95434877
transcript_13108.known	chr1	+	7492	20	FSM	ENSG00000116191.19	ENST00000367635.8	7492	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_15	11.6702144717728	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATTGGGTGAGGATGTTT	178721528	True	NA	-74	True	AATAAA	-14	NA	178725243	178921840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044_178808129_178811314_178811405_178821611_178821705_178833423_178833551_178877497_178877636_178878901_178878993_178883465_178883534_178885075_178885212_178885968_178886121_178889641_178889697_178892229_178892308_178893918_178894025_178897663_178897757_178902105_178902212_178906775_178906868_178916329
transcript_131081.known	chr7	-	1099	9	FSM	ENSG00000105854.13	ENST00000446142.5	1099	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	138.434099845378	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCTAAATTGTACTTTT	-95431721	True	NA	NA	False	NA	NA	NA	95434976	95405338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416171_95416246_95424514_95424586_95434877
transcript_131082.nic	chr7	-	1712	9	NIC	ENSG00000105854.13	novel	1610	9	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_6	106.812920566755	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTGTGTTTAATTC	-95431805	True	NA	NA	False	ATTAAA	-37	NA	95435060	95404861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416171_95416298_95424514_95424586_95434877
transcript_131083.known	chr7	-	1876	9	FSM	ENSG00000105854.13	ENST00000633192.1	1876	9	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_6	41.821047332653	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGGAGTTATATTAAAGA	NA	False	NA	NA	False	ATTAAA	-2	NA	95435329	95404896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411780_95412311_95412478_95416241_95416298_95424514_95424586_95434877
transcript_131087.nnic	chr7	-	1440	8	NIC	ENSG00000105854.13	novel	1726	9	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_5	107.732283452822	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTCTGTGTTTAATTC	-95431805	True	NA	NA	False	ATTAAA	-37	NA	95435060	95404861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_95405489_95406118_95406248_95406986_95407069_95409900_95410102_95411652_95411744_95416241_95416298_95424514_95424586_95434877
transcript_131090.nic	chr7	+	2461	13	NIC	ENSG00000158560.14	novel	774	7	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	2.52762514801718	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGCACCAGTGTGAGTA	95837027	True	NA	2	True	AATAAA	-14	NA	95837532	96098424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_95837650_95869882_95869999_95977511_95977602_95984814_95984978_95987055_95987156_95995947_95996074_96028174_96028322_96032666_96032781_96035618_96035753_96039276_96039422_96076056_96076198_96080362_96080489_96097482
transcript_131092.nic	chr7	+	1693	2	ISM	ENSG00000158560.14	ENST00000519371.1	774	7	-167	156945	-167	43248	5prime_fragment	FALSE	canonical	3	6	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAATACAAAATTAGAAAA	NA	False	NA	NA	False	AATACA	-32	NA	95837450	95871376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_95837650_95869882
transcript_131095.known	chr7	-	3192	18	FSM	ENSG00000004864.14	ENST00000416240.6	3192	18	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_9	101.488915650922	328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGAGTTGTTTGGTCTTGT	-96316320	True	NA	-4	True	AATAAA	-15	NA	96322147	96120220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96121378_96121654_96121746_96121838_96121998_96131742_96131882_96146555_96146697_96170044_96170126_96171471_96171525_96184276_96184436_96184926_96185015_96189293_96189379_96189580_96189675_96191108_96191248_96193036_96193184_96208837_96208978_96234801_96234918_96277195_96277339_96296897_96296952_96321941
transcript_13111.nic	chr1	+	558	5	ISM	ENSG00000116191.19	ENST00000495034.5	1970	10	29	71708	-25	-71708	5prime_fragment	FALSE	canonical	3	94	junction_4	9.63068014212911	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGTTCTGCACCAAATGC	178721478	True	NA	NA	False	AATAAA	-10	NA	178725193	178808080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_178725420_178776681_178776822_178784417_178784523_178785556_178785608_178808044
transcript_131112.known	chr7	-	582	3	FSM	ENSG00000127922.10	ENST00000623498.3	582	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	3877.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTGAGCATGCTCCGG	-96654260	True	NA	NA	False	NA	NA	NA	96709826	96645587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96645937_96694797_96694892_96709687
transcript_131113.known	chr7	-	1314	3	FSM	ENSG00000127922.10	ENST00000248566.4	458	3	-45	-811	-11	811	multi-exon	FALSE	canonical	3	7023	junction_1	367	36213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAGCATAAATATGTTT	-96654325	True	NA	NA	False	AATACA	-19	NA	96709891	96687950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96688967_96694797_96694892_96709687
transcript_131114.known	chr7	-	1590	3	FSM	ENSG00000127922.10	ENST00000444799.5	1590	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3878.5	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGAATTTCCATTCAC	-96654292	True	NA	NA	False	AATAAA	-19	NA	96709858	96649194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_96650520_96694797_96694892_96709687
transcript_131120.known	chr7	+	731	3	FSM	ENSG00000196636.8	ENST00000360382.4	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCCATATTAGTCTTCT	97110893	True	NA	NA	False	TTTAAA	-13	NA	97117722	97181487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97117898_97136387_97136468_97181011
transcript_131126.known	chr7	+	952	2	FSM	ENSG00000196636.8	ENST00000432641.3	952	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTTTCCTCCAGTGTTTG	97110868	True	NA	16	True	AATAAA	-16	NA	97117697	97181763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97117898_97181011
transcript_131127.known	chr7	+	360	2	FSM	ENSG00000196636.8	ENST00000489852.1	360	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTCTCTCAGGAAGAAG	97110871	True	NA	NA	False	AATGAA	-7	NA	97117700	97142835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97117898_97142672
transcript_131128.known	chr7	+	1061	7	FSM	ENSG00000006128.12	ENST00000319273.10	1061	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.7938424357067	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTGTCACATGTCTTT	97732057	True	NA	NA	False	AATAAA	-18	NA	97732085	97740472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734247_97734293_97734825_97734850_97736298_97736353_97739873
transcript_131129.known	chr7	+	1011	6	FSM	ENSG00000006128.12	ENST00000346867.4	1011	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.6	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGATTTTTGTCACA	97732055	True	NA	NA	False	AATAAA	-11	NA	97732083	97740465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_97732196_97732603_97732736_97733722_97733820_97734825_97734850_97736298_97736353_97739873
transcript_131135.nnic	chr7	-	943	5	Fusion	ENSG00000284707.2_ENSG00000284627.1_ENSG00000243554.1	novel	1088	2	NA	NA	-89	5302	multi-exon	FALSE	canonical	0	0	junction_2	15.4434452114805	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-97972307	False	NA	NA	False	AATAAA	-19	NA	97972388	97922779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_-_97923084_97928081_97928318_97928709_97928778_97937079_97937161_97972134
transcript_131137.nnic	chr7	-	647	2	NNC	ENSG00000284707.2	novel	3743	18	NA	NA	-13	13575	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	0	32	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-97928244	True	NA	NA	False	AATAAA	-19	NA	97928424	97922779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_97923084_97928081
transcript_131138.nnic	chr7	-	957	2	NIC	ENSG00000285725.1	novel	1910	3	NA	NA	-1950	-3617	intron_retention	FALSE	canonical	3	29	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCCTGTTTGCTTTAT	-97969419	True	NA	2	True	AATAAA	-24	NA	97972354	97969993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_97970731_97972134
transcript_131139.nnic	chr7	-	834	2	NNC	ENSG00000243554.1	novel	447	6	NA	NA	-98	-2404	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCGA	-97969417	True	NA	NA	False	NA	NA	NA	97972352	97971408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_97972025_97972134
transcript_13114.known	chr1	+	2031	6	FSM	ENSG00000186283.14	ENST00000367627.8	2031	6	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_3	55.2028984746272	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179079323	True	NA	19	True	ATTAAA	-20	NA	179082069	179095996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179082388_179082939_179083054_179085627_179085894_179087910_179088090_179094092_179094218_179094967
transcript_131141.known	chr7	-	2356	14	FSM	ENSG00000070669.17	ENST00000175506.8	2356	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	193.64858674395	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATTTATGTTCATGCAG	NA	False	NA	5	True	AATAAA	-26	NA	97872542	97852117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718_97871997_97872350
transcript_131146.known	chr7	-	1812	13	FSM	ENSG00000070669.17	ENST00000444334.5	1812	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	145.233337158595	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGGTAGATAGGGGAACAA	-97867125	True	NA	-81	True	NA	NA	NA	97872436	97852203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97869777_97869814_97872350
transcript_131148.known	chr7	-	2289	13	FSM	ENSG00000070669.17	ENST00000394309.7	2289	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	153.276144226324	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGCTGTAGTCATTTAT	-97866820	False	5311	-5	True	AATAAA	-16	NA	97872131	97852127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97871718
transcript_131150.known	chr7	-	2385	13	FSM	ENSG00000070669.17	ENST00000394308.8	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_7	62.3204086422204	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTTGTGGACCTC	-97867097	True	NA	NA	False	AATAAA	-18	NA	97872408	97851676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869180_97869777_97869814_97872350
transcript_131155.known	chr7	-	1865	12	FSM	ENSG00000070669.17	ENST00000422745.5	1865	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	162.470849260734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTCCTAAATCTAAACC	-97867156	True	NA	-23	True	NA	NA	NA	97872467	97852145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97868907_97869106_97872350
transcript_13116.nic	chr1	+	1407	3	ISM	ENSG00000186283.14	ENST00000367627.8	2031	6	5767	0	2039	0	3prime_fragment	FALSE	canonical	3	292	junction_1	35	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGGCGTACTTTCTGTT	179087488	True	NA	19	True	ATTAAA	-20	NA	179087836	179095996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_179088090_179094092_179094218_179094967
transcript_131165.known	chr7	-	1588	11	FSM	ENSG00000070669.17	ENST00000455086.5	1588	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_10	167.575684393649	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATAAAAGTCCTAAATC	-97867083	True	NA	-29	True	NA	NA	NA	97872394	97852151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_97852469_97853059_97853216_97853304_97853387_97854579_97854681_97855352_97855460_97856689_97856817_97858277_97858406_97858853_97858956_97859212_97859399_97864258_97864497_97872350
transcript_131181.nic	chr7	-	865	3	NIC	ENSG00000285725.1	novel	1910	3	NA	NA	-1949	-3617	intron_retention	FALSE	canonical	2	5	junction_1	12	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTCCTGTTTGCTTTAT	-97969418	True	NA	2	True	AATAAA	-24	NA	97972353	97969993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_97970228_97970318_97970731_97972134
transcript_131183.nnic	chr7	-	670	3	NNC	ENSG00000285725.1	novel	1910	3	NA	NA	-1948	-4003	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	12	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAAAAGAATGAGAAGATT	-97969417	True	NA	NA	False	NA	NA	NA	97972352	97970379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_97970731_97971923_97972025_97972134
transcript_131184.nic	chr7	-	569	2	ISM	ENSG00000243554.1	ENST00000453589.1	447	6	-99	1376	-99	-1376	5prime_fragment	FALSE	canonical	3	29	junction_1	0	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAAAAGAATGAGAAGAT	-97969418	True	NA	NA	False	NA	NA	NA	97972353	97970380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_97970731_97972134
transcript_131187.known	chr7	-	3645	14	FSM	ENSG00000006453.14	ENST00000005260.9	3645	14	0	0	0	0	multi-exon	TRUE	canonical	3	145	junction_9	19.8592681774626	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGAGCTGTAAGCGC	-98395618	True	NA	-14	True	AATAAA	-17	NA	98401090	98291649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_98293597_98294073_98294112_98304195_98304377_98306438_98306517_98307688_98307897_98310444_98310593_98312096_98312265_98315459_98315613_98317218_98317357_98320057_98320130_98320236_98320299_98355041_98355129_98362356_98362433_98400801
transcript_131189.nnic	chr7	+	666	3	NNC	ENSG00000164713.10	novel	667	3	NA	NA	-32	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	87	185	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	98252092	True	NA	24	True	AATAAA	-17	NA	98252346	98291524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_98252496_98282350_98282454_98291110
transcript_131190.known	chr7	+	667	3	FSM	ENSG00000164713.10	ENST00000456357.6	667	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	85.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCTGGTGCTGCTTAC	98252124	True	NA	24	True	AATAAA	-17	NA	98252378	98291524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_98252529_98282350_98282454_98291110
transcript_131192.known	chr7	+	790	3	FSM	ENSG00000164713.10	ENST00000297290.4	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	7	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGCTTTCAGAGACCCAG	98271723	True	NA	45	True	AATAAA	-38	NA	98281685	98291545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_98281938_98282350_98282454_98291110
transcript_131195.known	chr7	-	784	1	FSM	ENSG00000214389.2	ENST00000398259.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	720	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAAAGTTCAGACTTCA	NA	False	NA	NA	False	NA	NA	NA	98386584	98385800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_98385800_98386600
transcript_131197.known	chr7	+	2713	5	FSM	ENSG00000106236.4	ENST00000265634.4	2713	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.63216876123687	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTGTTTGTCTTCCTC	98617119	True	NA	8	True	ATTAAA	-16	NA	98617284	98629869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_98617888_98619642_98619860_98624921_98625167_98627164_98627345_98628401
transcript_131199.nic	chr7	+	576	2	ISM	ENSG00000196367.14	ENST00000456197.2	12675	73	28	131654	28	-8812	5prime_fragment	FALSE	canonical	3	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAAATGCATAAATATGAC	98872337	True	NA	NA	False	NA	NA	NA	98878559	98881587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_98878638_98881089
transcript_13120.known	chr1	+	6840	16	FSM	ENSG00000057252.13	ENST00000367619.8	6840	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_15	10.0642381176564	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTTTCTGATTCATT	179293382	True	NA	7	True	ATTAAA	-19	NA	179293796	179358680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179293937_179302676_179302803_179323436_179323496_179335505_179335658_179337836_179337897_179339437_179339546_179341027_179341311_179342113_179342193_179342861_179342944_179343589_179343636_179344946_179345077_179347599_179347698_179348843_179348943_179350295_179350432_179351316_179351463_179353584
transcript_131200.known	chr7	-	5668	18	FSM	ENSG00000198742.10	ENST00000361368.7	5668	18	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_2	20.8832642717464	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTGGCGTCTGTTATT	-99142300	True	NA	-17	True	AATAAA	-13	NA	99144108	99027439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99030684_99033036_99033122_99035514_99035717_99037066_99037188_99038387_99038526_99040377_99040557_99042117_99042233_99045697_99045802_99047683_99047883_99049562_99049710_99051356_99051442_99052204_99052447_99054789_99054866_99057204_99057271_99057417_99057552_99060598_99060708_99061798_99061838_99143725
transcript_131209.known	chr7	+	1578	11	FSM	ENSG00000130429.15	ENST00000427217.6	1578	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	292.654557456398	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	99365826	True	NA	NA	False	AATAAA	-35	NA	99374729	99394801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377357_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131211.known	chr7	+	1505	11	FSM	ENSG00000130429.15	ENST00000458033.6	1505	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	290.281053463708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	99365826	True	NA	NA	False	NA	NA	NA	99374729	99394712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377357_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131214.known	chr7	+	1509	11	FSM	ENSG00000130429.15	ENST00000431816.6	1509	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	294.237132259	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCCCAAAGCACTATGCT	99365826	True	NA	NA	False	NA	NA	NA	99374729	99394712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131216.known	chr7	+	1669	11	FSM	ENSG00000130429.15	ENST00000645391.1	1669	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	291.879786898648	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATGGACATGCTTGC	99365771	True	NA	NA	False	AATAAA	-35	NA	99374674	99394801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377337_99377456_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131218.known	chr7	+	1582	10	FSM	ENSG00000241685.10	ENST00000262942.10	1582	10	0	0	0	0	multi-exon	TRUE	canonical	3	741	junction_7	93.1128347758783	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTTTGTTTCCTTGT	99315648	True	NA	8	True	AATAAA	-15	NA	99325897	99366262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99326005_99333324_99333418_99338180_99338286_99344292_99344516_99348851_99348960_99353908_99354122_99358339_99358416_99359544_99359739_99363542_99363634_99365890
transcript_131224.known	chr7	+	1511	10	FSM	ENSG00000130429.15	ENST00000646101.2	1511	10	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	54.9080038690981	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTATGTGGAAGGAGA	99365826	True	NA	NA	False	AAAAAG	-15	NA	99374729	99394816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_13124.known	chr1	+	3525	17	FSM	ENSG00000162782.16	ENST00000294848.12	3525	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	0.863767185067828	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGATCTATATTTGG	179591864	False	NA	NA	False	GATAAA	-19	NA	179591889	179691272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179592126_179592601_179592848_179593459_179593868_179595627_179595819_179618598_179618683_179621034_179621092_179630766_179630921_179634456_179634630_179635666_179635888_179639838_179640052_179640378_179640446_179650866_179651068_179652038_179652198_179662103_179662287_179663347_179663492_179669193_179669405_179690695
transcript_131257.known	chr7	+	1556	11	FSM	ENSG00000130429.15	ENST00000455009.6	1556	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	297.233981906511	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCATGAACTGCTTCAAAA	99365803	True	NA	NA	False	NA	NA	NA	99374706	99394732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99377333_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131258.known	chr7	+	1715	12	FSM	ENSG00000130429.15	ENST00000451682.5	1715	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	331.407766109994	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TGTAAAAAAAAAAAAAAAAA	99365826	True	NA	NA	False	AATAAA	-10	NA	99374729	99394776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99374782_99376432_99376575_99377337_99377440_99385701_99385779_99386684_99386790_99388038_99388262_99389904_99390013_99390892_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131259.known	chr7	+	945	5	FSM	ENSG00000130429.15	ENST00000481997.5	945	5	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_2	28.0479500142167	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGTAATTATGGACA	99390857	False	NA	NA	False	AATAAA	-28	NA	99390871	99394794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99391100_99391177_99391254_99392670_99392877_99394028_99394120_99394450
transcript_131260.known	chr7	-	2604	6	FSM	ENSG00000106244.13	ENST00000350498.8	2604	6	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_5	96.7752034355909	5451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGTATTCCTTGAATAG	-99361814	True	NA	NA	False	AATAAA	-20	NA	99408597	99394672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99396741_99397861_99398014_99400302_99400425_99403397_99403506_99404861_99404954_99408535
transcript_131261.known	chr7	-	120	3	FSM	ENSG00000106244.13	ENST00000626285.1	120	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	277.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGGAAGAAGAGGAGCAA	-99408019	False	NA	NA	False	NA	NA	NA	99408548	99403510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99403526_99404861_99404954_99408535
transcript_131271.known	chr7	+	1823	8	FSM	ENSG00000160917.15	ENST00000292476.10	1823	8	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_6	201.100441956506	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATGTCTCATTAATTAAG	99434266	True	NA	26	True	ATTAAA	-14	NA	99438942	99457373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99453965_99454137_99456431
transcript_131273.known	chr7	+	1738	8	FSM	ENSG00000160917.15	ENST00000436336.6	1738	8	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	151.023987822992	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATGAAATGGATTAAAGC	99438898	False	NA	-5	True	NA	NA	NA	99438921	99457342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99439186_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_131278.known	chr7	+	942	8	FSM	ENSG00000160917.15	ENST00000441580.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	301.811672594493	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCGAGCTGGCCCGCAGA	99439365	False	NA	NA	False	NA	NA	NA	99439375	99456589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99439597_99444788_99444840_99448120_99448274_99450275_99450372_99450701_99450796_99452367_99452441_99454040_99454137_99456431
transcript_131281.known	chr7	-	5464	8	FSM	ENSG00000106246.18	ENST00000292478.9	5464	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	20.3960780543711	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-99435182	True	NA	NA	False	NA	NA	NA	99438798	99416738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99420150_99423774_99423958_99424794_99425617_99429102_99429205_99429587_99429807_99433277_99433419_99434789_99435269_99438691
transcript_131297.known	chr7	-	460	4	FSM	ENSG00000241468.8	ENST00000449683.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3452.23602257371	5818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGATTGCCTGCCTGTCTG	-99437724	True	NA	-31	True	AATAAA	-18	NA	99466167	99458189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460224_99466128
transcript_131305.known	chr7	+	1052	6	FSM	ENSG00000106245.11	ENST00000222969.10	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	287.896925999567	4208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99393070	True	NA	17	True	AATAAA	-18	NA	99408968	99419616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99409246_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_131306.known	chr7	+	1139	6	FSM	ENSG00000106245.11	ENST00000403633.6	1139	6	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	238.753764368229	6056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACGTCTCTTCTTTCA	99407582	True	NA	17	True	AATAAA	-18	NA	99408640	99419616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99409005_99410033_99410170_99411063_99411187_99416137_99416261_99417428_99417596_99419390
transcript_131307.known	chr7	-	443	4	FSM	ENSG00000241468.8	ENST00000292475.8	443	4	0	0	0	0	multi-exon	FALSE	canonical	3	2700	junction_3	2186.67179877447	17065	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99437724	True	NA	-36	True	AATAAA	-13	NA	99466167	99458194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466110
transcript_131308.known	chr7	-	306	3	FSM	ENSG00000241468.8	ENST00000488775.5	306	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	2008	2437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGTGTGCTGATTGCCTGC	-99437724	True	NA	-38	True	AATAAA	-11	NA	99466167	99458196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99460085_99460194_99466128
transcript_131309.known	chr7	-	305	4	FSM	ENSG00000241468.8	ENST00000394186.3	305	4	0	0	0	0	multi-exon	FALSE	canonical	3	4480	junction_3	1359.73698437112	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCACCCCACGACCTTG	-99437718	True	NA	-150	True	NA	NA	NA	99466161	99458308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99459146_99459264_99460085_99460194_99466128
transcript_131310.known	chr7	-	323	3	FSM	ENSG00000241468.8	ENST00000359832.8	323	3	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	1118	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGCTGATTGCCTGCCT	-99437721	True	NA	-36	True	AATAAA	-13	NA	99466164	99458194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99458356_99460085_99460194_99466110
transcript_131311.known	chr7	+	842	7	FSM	ENSG00000198556.14	ENST00000447047.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	12.4588210606872	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATACAGCAGGGGCTTCCT	99471536	True	NA	NA	False	NA	NA	NA	99472910	99486654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660_99479788_99483738_99483854_99484029_99484144_99486475
transcript_131323.nnic	chr7	+	1394	5	NNC	ENSG00000198556.14	novel	2994	4	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	14.5945195193264	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	99472766	False	NA	6	True	AATAAA	-21	NA	99472793	99482326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660_99480039_99481734
transcript_131326.known	chr7	+	1616	5	FSM	ENSG00000198556.14	ENST00000331410.10	1616	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	14.3614066163451	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCTTTGTGTAGCCAAT	99471515	True	NA	20	True	AATAAA	-26	NA	99472889	99487605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99484029_99484144_99486475
transcript_131328.known	chr7	+	5626	5	FSM	ENSG00000196652.12	ENST00000454175.1	5626	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	38.0944549770698	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTTGGAGAGATGGTA	99503781	True	NA	NA	False	NA	NA	NA	99505253	99534700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99506459_99512452_99512592_99519826_99519910_99525812_99526419_99531107
transcript_13133.nic	chr1	-	1001	5	ISM	ENSG00000169905.13	ENST00000367612.7	7905	6	-28	7638	-24	-7629	5prime_fragment	TRUE	canonical	3	6	junction_3	23.710493457539	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGGAAGAAATTAAAGAGAA	-179871515	True	NA	4	True	NA	NA	NA	179877827	179847604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_179847637_179850844_179851364_179852631_179852812_179877238_179877374_179877692
transcript_131332.nnic	chr7	+	507	4	NNC	ENSG00000198556.14	novel	510	4	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.0277457017791	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	99472766	False	NA	2	True	AATAAA	-17	NA	99472793	99482322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99472936_99476402_99476481_99479660_99479788_99482162
transcript_131335.known	chr7	+	2994	4	FSM	ENSG00000198556.14	ENST00000483089.5	2994	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	15.1730755689881	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	99471515	True	NA	6	True	AATAAA	-21	NA	99472889	99482326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99478273_99478357_99479660
transcript_131337.known	chr7	+	510	4	FSM	ENSG00000198556.14	ENST00000379724.3	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.6714276000077	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGATTGTGCCAATCTCT	99471537	True	NA	2	True	AATAAA	-17	NA	99472911	99482322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99479660_99479788_99482162
transcript_131338.nic	chr7	+	564	4	NIC	ENSG00000198556.14	novel	842	7	NA	NA	-28	-244	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	12.5698050899765	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGCCAATCTCTATTC	99471487	True	NA	NA	False	AATAAA	-21	NA	99472861	99483902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_99473057_99476402_99476481_99479660_99479788_99483738
transcript_131340.nnic	chr7	+	1220	4	NNC	ENSG00000198556.14	novel	2994	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	15.2970585407784	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTGCCAATCTCTGTTT	99471510	True	NA	6	True	AATAAA	-21	NA	99472884	99482326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99473057_99476402_99476481_99479660_99480039_99481734
transcript_131342.known	chr7	+	1884	3	FSM	ENSG00000198556.14	ENST00000488485.5	1884	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	4.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTTGCATGAATTTTT	99471517	True	NA	2	True	AATAGA	-12	NA	99472891	99481301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99473057_99476402_99476481_99479660
transcript_131347.nic	chr7	-	1248	3	ISM	ENSG00000160908.15	ENST00000651364.1	5731	5	-80	12642	11	0	5prime_fragment	FALSE	canonical	2	7	junction_1	52	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGAGTTAGCTTTTT	-99497619	True	NA	NA	False	NA	NA	NA	99500313	99486518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_99486964_99498715_99498843_99499637
transcript_131349.nic	chr7	-	911	3	ISM	ENSG00000160908.15	ENST00000651364.1	5731	5	-80	12979	11	-337	5prime_fragment	FALSE	canonical	2	7	junction_1	52	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCCTTACGCCTAATGA	-99497619	True	NA	NA	False	AAAAAG	-24	NA	99500313	99486855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_99486964_99498715_99498843_99499637
transcript_131350.nnic	chr7	-	1092	3	NNC	ENSG00000160908.15	novel	1019	2	NA	NA	11	2610	intron_retention	FALSE	canonical	1	1	junction_1	55	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTCTCACTTTGTCG	-99497619	True	NA	NA	False	AATACA	-29	NA	99500313	99490629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_99490919_99498715_99498843_99499637
transcript_131352.known	chr7	-	2163	3	FSM	ENSG00000160908.15	ENST00000337673.7	2163	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	11	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGTGACTTGGCCTGTT	-99497587	True	NA	-8	True	AATAAA	-22	NA	99500281	99493239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99494632_99498715_99498843_99499637
transcript_131354.known	chr7	-	2017	2	FSM	ENSG00000160908.15	ENST00000426306.2	2017	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTATGTGACTTGGCCTG	-99497570	True	NA	-10	True	AATAAA	-20	NA	99500264	99493241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99494632_99499637
transcript_131356.known	chr7	-	325	2	FSM	ENSG00000160908.15	ENST00000464401.1	325	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCCTCTGTACTGCTAG	-99497010	False	53	NA	False	NA	NA	NA	99499704	99498584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99498843_99499637
transcript_131358.known	chr7	+	4344	7	FSM	ENSG00000196652.12	ENST00000394170.6	4344	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	28.6860399652669	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTCTGAATCCCTGTC	99504779	False	NA	11	True	AATAAA	-16	NA	99504949	99533822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99505161_99506004_99506459_99512452_99512592_99519826_99519910_99520168_99520305_99525812_99526419_99531107
transcript_131363.known	chr7	+	1198	3	FSM	ENSG00000197343.11	ENST00000440391.5	1198	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTCTACTTTTTGGAGTA	99555037	False	NA	13	True	NA	NA	NA	99558825	99564705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99559018_99560532_99560696_99563862
transcript_131364.known	chr7	-	2468	2	FSM	ENSG00000221909.3	ENST00000449309.2	2468	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTTTCTACATAGTA	-99550199	True	NA	-14	True	AATAAA	-20	NA	99552114	99546299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99548507_99551853
transcript_131366.nnic	chr7	-	459	2	Genic_Genomic	ENSG00000221909.3	novel	1943	2	NA	NA	-19	-10948	multi-exon	FALSE	canonical	2	9	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGCATTTTATATATTT	NA	False	NA	2	True	ATTAAA	-17	NA	99558555	99557748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_-_99557902_99558249
transcript_131367.known	chr7	+	4352	8	FSM	ENSG00000197037.11	ENST00000394152.7	4352	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	12.9220583436516	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATCTCTGTCCACTCCT	99616507	True	NA	NA	False	TATAAA	-17	NA	99616945	99632408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99617017_99618524_99618652_99619047_99619133_99619560_99619994_99621372_99621575_99622548_99622641_99624056_99624181_99629190
transcript_131374.nnic	chr7	-	777	5	Antisense	novelGene_ENSG00000021461.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0.866025403784439	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGGCTCTTTTTGT	-99842985	True	NA	NA	False	AATAAA	-18	NA	99843031	99829283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_99829558_99830257_99830516_99831489_99831618_99838443_99838463_99842933
transcript_131377.nnic	chr7	-	764	4	Antisense	novelGene_ENSG00000021461.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTTGGCTCTTTTTGT	-99842987	True	NA	NA	False	AATAAA	-18	NA	99843033	99829283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_99829558_99830257_99830516_99831489_99831618_99842929
transcript_13138.nnic	chr1	-	435	3	NNC	ENSG00000169905.13	novel	7905	6	NA	NA	-24	1208	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	35	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTGTATGCTTTATAT	-179871515	True	NA	-16	True	AATAAA	-13	NA	179877827	179857821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179857987_179877238_179877374_179877692
transcript_131380.nnic	chr7	-	814	4	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4743	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	14.3836326735943	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99934253	False	NA	0	True	AATAAA	-20	NA	99934363	99923265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_99923604_99928839_99928915_99929380_99929622_99934203
transcript_131381.nnic	chr7	-	805	4	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4841	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	14.3836326735943	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99934351	False	NA	0	True	AATAAA	-20	NA	99934461	99923265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_99923604_99928839_99928915_99929487_99929622_99934203
transcript_131385.nnic	chr7	-	1292	3	NNC	ENSG00000176402.6	novel	1119	2	NA	NA	-4755	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	15.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99934265	False	NA	0	True	AATAAA	-20	NA	99934375	99923265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_99923604_99928839_99929622_99934203
transcript_13139.nnic	chr1	-	590	3	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-24	2624	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	36	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-179871515	True	NA	-15	True	AATAAA	-18	NA	179877827	179862440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179862827_179877304_179877374_179877692
transcript_131390.known	chr7	-	1119	2	FSM	ENSG00000176402.6	ENST00000312891.3	1119	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGGTCATTGGAC	-99929523	False	97	0	True	AATAAA	-20	NA	99929620	99923265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99923604_99928839
transcript_131391.known	chr7	-	1181	4	FSM	ENSG00000160862.13	ENST00000292401.9	1181	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.35702260395516	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAGAGAATCCTTTTTTT	-99975982	True	NA	NA	False	AATAAA	-24	NA	99976031	99966729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_99967287_99968154_99968431_99971745_99972007_99975944
transcript_131397.nnic	chr7	+	467	3	NIC	ENSG00000286923.2	novel	656	4	NA	NA	-10	-4	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	2	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACGAAATTGTTGAATAA	99997522	True	NA	NA	False	AATAAA	-21	NA	99997679	100011625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_99997787_99999382_99999493_100011375
transcript_1314.known	chr1	+	1138	5	FSM	ENSG00000225077.3	ENST00000441724.1	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.2671152621316	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGGACTGTTGCCACTCG	6235973	True	NA	NA	False	NA	NA	NA	6236239	6238940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6236337_6236965_6237151_6237244_6237346_6237813_6237849_6238220
transcript_13140.nnic	chr1	-	591	3	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-24	2624	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	36	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-179871515	True	NA	-15	True	AATAAA	-18	NA	179877827	179862440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179862851_179877327_179877374_179877692
transcript_131400.nnic	chr7	+	591	3	NNC	ENSG00000286923.2	novel	529	3	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCACGAAATTGTTGAATAA	99997535	True	NA	NA	False	AATAAA	-21	NA	99997692	100011625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_99997924_99999382_99999493_100011375
transcript_131401.known	chr7	+	656	4	FSM	ENSG00000286923.2	ENST00000671037.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.96655480858378	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGAATAATTTGTTTTG	99997532	True	NA	NA	False	AATAAA	-30	NA	99997689	100011634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_99997787_99999382_99999493_100008132_100008323_100011375
transcript_131402.known	chr7	+	9403	6	FSM	ENSG00000106261.17	ENST00000324306.11	9403	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	9.19565114605812	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTGTGCTGGTTTGTTT	100012308	True	NA	34	True	AATAAA	-20	NA	100015595	100041689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100015727_100023418_100023933_100024153_100024308_100029860_100029953_100030248_100030376_100033304
transcript_131408.known	chr7	+	1449	3	FSM	ENSG00000106261.17	ENST00000482979.5	1449	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTTTTTTGTTTTTAG	100012311	True	NA	NA	False	ATTAAA	-30	NA	100015598	100024960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100015727_100023418_100023933_100024153
transcript_131410.nnic	chr7	+	841	2	NNC	ENSG00000106261.17	novel	9403	6	NA	NA	0	-7074	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGGAGAATTCATTGTAA	100012308	True	NA	NA	False	AATAAA	-17	NA	100015595	100016808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100015727_100016098
transcript_131412.known	chr7	-	1441	6	FSM	ENSG00000166526.18	ENST00000413658.6	1441	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	65.214722264225	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATATATAACGTCTCTCTC	-100078310	True	NA	-4	True	ACTAAA	-19	NA	100081727	100064032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100064913_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_131415.known	chr7	-	2797	6	FSM	ENSG00000166526.18	ENST00000299667.9	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	20.0957706993288	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGAGTGTGGTTTTGTGC	-100078306	True	NA	-2	True	ATTAAA	-21	NA	100081723	100069972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100079535_100079657_100081634
transcript_131418.nic	chr7	+	2144	5	NIC	ENSG00000166529.16	novel	2009	4	NA	NA	-2	0	intron_retention	FALSE	canonical	3	37	junction_1	42.8682574873297	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	100048032	True	NA	7	True	AATAAA	-18	NA	100049771	100065040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100049842_100051477_100051611_100056910_100057406_100057697_100057891_100063787
transcript_131421.known	chr7	+	1870	5	NNC	ENSG00000166529.16	novel	2009	4	NA	NA	5	-1	intron_retention	FALSE	non_canonical	0	0	junction_2	55.4278810708113	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCCTCAGGACTATTAT	100048059	True	NA	4	True	AATAAA	-15	NA	100049798	100065037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100049842_100056910_100057277_100057387_100057406_100057697_100057891_100063787
transcript_131423.known	chr7	+	1904	5	FSM	ENSG00000166529.16	ENST00000456748.6	1904	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	51.2853536596951	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCTCAGGACTATTATT	100048034	True	NA	5	True	AATAAA	-16	NA	100049773	100065038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787_100063980_100064082
transcript_131426.known	chr7	-	735	5	FSM	ENSG00000166526.18	ENST00000449785.5	735	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	65.479004268544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTTATCTCACATCAGA	-100078322	True	NA	NA	False	AATATA	-32	NA	100081739	100071929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100077302_100077434_100081634
transcript_131427.known	chr7	-	574	5	FSM	ENSG00000166526.18	ENST00000441298.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	80.1155415634195	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAAAGGCCGCTGGGGA	-100078321	True	NA	NA	False	TTTAAA	-24	NA	100081738	100072079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100079535_100079657_100081634
transcript_13143.known	chr1	-	7067	3	FSM	ENSG00000169905.13	ENST00000482587.5	7067	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAACTGTCATACATTTG	-179871487	True	NA	-11	True	AATAAA	-37	NA	179877799	179859029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179865855_179877238_179877374_179877692
transcript_131430.known	chr7	+	2009	4	FSM	ENSG00000166529.16	ENST00000292450.9	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	30.3790863735052	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTCAGGACTATTATTAT	100048034	True	NA	7	True	AATAAA	-18	NA	100049773	100065040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100049842_100056910_100057406_100057697_100057891_100063787
transcript_131431.nic	chr7	+	1723	4	NIC	ENSG00000166529.16	novel	1904	5	NA	NA	-2	7	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	57.1722543430523	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGACTATTATTATAACAAAT	100048032	True	NA	14	True	AATAAA	-25	NA	100049771	100065047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100049842_100056910_100057406_100057697_100057891_100064082
transcript_131433.known	chr7	-	2545	4	FSM	ENSG00000166526.18	ENST00000412947.6	2545	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	82.624989494032	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATAGTTTTTCAGAAGAG	-100078325	True	NA	-21	True	ATTAAA	-2	NA	100081742	100069991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075262_100075541_100075631_100081634
transcript_131434.known	chr7	-	640	3	FSM	ENSG00000166526.18	ENST00000479192.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGCAACCTCCGCCTC	-100078320	True	NA	NA	False	NA	NA	NA	100081737	100077017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100077434_100079535_100079657_100081634
transcript_131435.known	chr7	-	2660	3	FSM	ENSG00000166526.18	ENST00000487620.1	2660	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	92	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAACAAAAAAACA	-100078345	True	NA	5	True	NA	NA	NA	100081762	100070176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100072213_100075134_100075631_100081634
transcript_131436.known	chr7	+	1107	10	FSM	ENSG00000168090.10	ENST00000418625.5	1107	10	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	805.352434161515	4727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGCTGGTGGCTCTGTC	100059278	True	NA	9	True	AATAAA	-21	NA	100088980	100091905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100089067_100089292_100089416_100089614_100089747_100090398_100090488_100090591_100090655_100090901_100090950_100091037_100091153_100091237_100091331_100091419_100091521_100091648
transcript_131437.known	chr7	+	1171	2	FSM	ENSG00000168090.10	ENST00000465027.1	1171	2	0	0	0	0	multi-exon	FALSE	canonical	3	2244	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATTACTATATGTTCTG	100059266	True	NA	NA	False	NA	NA	NA	100088968	100090362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100089067_100089289
transcript_13144.nnic	chr1	-	434	2	NNC	ENSG00000169905.13	novel	7067	3	NA	NA	-3	2624	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTGAAGACTAGTTAGT	-179871494	True	NA	-15	True	AATAAA	-18	NA	179877806	179862440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_179862761_179877692
transcript_131444.known	chr7	+	3591	15	FSM	ENSG00000221838.10	ENST00000359593.9	3591	15	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	15.3855219513114	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTGTGGTGGTTCA	100100391	True	NA	NA	False	AAAAAG	-3	NA	100101642	100109039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_13145.known	chr1	-	888	2	FSM	ENSG00000169905.13	ENST00000495650.1	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTAGACCGTATTAAC	-179871478	True	NA	NA	False	AATGAA	-11	NA	179877790	179865064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179865855_179877692
transcript_131450.known	chr7	+	1836	15	FSM	ENSG00000221838.10	ENST00000429084.5	1836	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.8462282283972	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGTGTACGTGCACGT	100100305	True	NA	45	True	NA	NA	NA	100101556	100107177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100101773_100101879_100101990_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_131458.known	chr7	-	2727	15	FSM	ENSG00000106290.16	ENST00000344095.8	2727	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_14	245.643428321523	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTGATCCACTGCAGT	-100105897	True	NA	-12	True	AATAAA	-13	NA	100119346	100107078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100118879
transcript_131460.known	chr7	-	2297	15	FSM	ENSG00000106290.16	ENST00000452041.5	2297	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	269.388044217532	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTGATCCACTGCAGTC	-100105915	True	NA	-11	True	AATAAA	-14	NA	100119364	100107077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119328
transcript_131461.known	chr7	-	2318	15	FSM	ENSG00000106290.16	ENST00000437822.6	2318	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_14	282.070813586856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGGAAGGAAGTTGTAGAT	-100119601	False	240	-41	True	NA	NA	NA	100119841	100107167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119694
transcript_131463.known	chr7	-	2685	15	FSM	ENSG00000106290.16	ENST00000421980.5	2685	15	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_11	353.696031435272	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105910	True	NA	-3	True	AATAAA	-22	NA	100119359	100107069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113679_100113770_100113867_100113955_100114053_100114269_100118879
transcript_131471.known	chr7	+	1681	14	FSM	ENSG00000221838.10	ENST00000445208.5	1681	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	31.099953385684	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCAATCTACAACTTCC	100100305	True	NA	8	True	AAAAAG	-14	NA	100101556	100107140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100101773_100101879_100101969_100102674_100102782_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_131472.known	chr7	+	1814	14	FSM	ENSG00000221838.10	ENST00000422582.5	1814	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.3542098856753	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACAACTTCCTTCCGCTT	100101957	True	NA	16	True	AAAAAG	-22	NA	100102060	100107148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100102394_100102674_100102782_100102863_100102961_100103408_100103520_100103611_100103693_100104091_100104155_100104873_100104941_100105044_100105099_100105239_100105347_100105444_100105540_100105958_100106004_100106240_100106292_100106402_100106515_100106657
transcript_131473.known	chr7	-	2900	14	FSM	ENSG00000166508.18	ENST00000485286.5	2900	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	573.047660584855	1138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTCTAGCCTGGGCCTGA	-100100728	False	22281	-9	True	AATAAA	-18	NA	100100757	100092780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099404_100099588_100099754_100100013_100100094_100100212
transcript_13149.nic	chr1	-	520	2	ISM	ENSG00000169905.13	ENST00000483123.1	2687	3	-55	3283	-24	-3283	5prime_fragment	FALSE	canonical	3	72	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGTGCTAAAAAGGGCAAA	-179871515	True	NA	NA	False	NA	NA	NA	179877827	179876988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_179877374_179877692
transcript_131491.known	chr7	+	1478	6	FSM	ENSG00000166997.8	ENST00000262932.5	1478	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	10.5451410611713	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTGGGCCCAAAGTTTC	100118130	True	NA	23	True	ATTAAA	-23	NA	100119633	100125508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100119863_100122258_100122386_100122480_100122578_100122783_100122907_100124513_100124632_100124724
transcript_131506.known	chr7	-	2467	15	FSM	ENSG00000166508.18	ENST00000303887.10	2467	15	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	354.740038476007	2136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTGTTCGTTTTTATG	-100079116	True	NA	-1	True	ATTAAA	-23	NA	100101397	100092727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100093134_100093291_100093402_100094172_100094342_100095386_100095471_100095773_100096168_100097300_100097385_100097613_100097746_100097833_100097949_100098140_100098291_100098577_100098716_100099022_100099204_100099278_100099404_100099588_100099754_100100013_100100094_100101263
transcript_131507.known	chr7	-	2424	15	FSM	ENSG00000106290.16	ENST00000453269.7	2424	15	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_14	110.253256696775	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGCAGTCCTTCCTGC	-100105909	True	NA	-3	True	AATAAA	-22	NA	100119358	100107069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100107624_100107925_100108124_100108366_100108541_100109947_100110074_100110199_100110275_100111138_100111322_100111727_100111830_100111921_100112000_100112107_100112254_100112797_100112918_100113348_100113406_100113615_100113770_100113867_100113955_100114053_100114269_100119203
transcript_131508.known	chr7	-	703	5	ISM	ENSG00000106290.16	ENST00000451699.6	2363	15	-18	6585	0	212	5prime_fragment	FALSE	canonical	3	108	junction_4	467.233881476932	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGACATCATCAATACCCCT	-100105923	True	NA	NA	False	NA	NA	NA	100119372	100113669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100113770_100113867_100113955_100114053_100114269_100118517_100118650_100119203
transcript_13151.known	chr1	+	3397	10	FSM	ENSG00000143337.19	ENST00000435319.8	3397	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_7	15.9915100932254	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGTTATAAACTTAATGA	179882452	True	NA	13	True	AATAAA	-26	NA	179882695	179920077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_179882978_179884691_179884770_179889312_179889370_179900125_179900168_179901301_179901389_179903965_179904023_179907822_179907865_179908604_179908674_179913997_179914055_179917451
transcript_131548.known	chr7	+	613	4	FSM	ENSG00000188186.11	ENST00000488241.5	613	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	815.924424604795	3233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139534	True	NA	21	True	AATAAA	-21	NA	100148993	100154203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100149054_100149498_100149580_100153399_100153518_100153849
transcript_131563.known	chr7	+	519	3	FSM	ENSG00000188186.11	ENST00000474141.5	519	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	1045	2520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139452	True	NA	21	True	AATAAA	-21	NA	100148911	100154203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100148976_100153399_100153518_100153866
transcript_13157.known	chr1	-	989	1	FSM	ENSG00000272906.1	ENST00000610272.1	989	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATCCATTATTTTTA	-179882403	False	NA	NA	False	ATTAAA	-20	NA	179882595	179881606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_179881600_179882600
transcript_131572.known	chr7	-	1103	2	FSM	ENSG00000146826.17	ENST00000470260.1	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTATTGCTTCCAACTGA	-100154035	False	NA	-60	True	NA	NA	NA	100155674	100154474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100155165_100155261
transcript_131573.known	chr7	+	564	4	FSM	ENSG00000188186.11	ENST00000474831.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	834.523949459943	3224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139474	True	NA	21	True	AATAAA	-21	NA	100148933	100154203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100148976_100149498_100149566_100153399_100153518_100153866
transcript_131574.known	chr7	+	533	3	FSM	ENSG00000188186.11	ENST00000488338.2	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1000	2287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100152591	False	NA	21	True	AATAAA	-21	NA	100152679	100154203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100152758_100153399_100153518_100153866
transcript_131575.known	chr7	+	720	4	FSM	ENSG00000188186.11	ENST00000473459.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	952.134560985065	2568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGGACATGTGTGTTT	100139897	False	NA	21	True	AATAAA	-21	NA	100149356	100154203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100149580_100152715_100152758_100153399_100153518_100153866
transcript_131576.known	chr7	-	2405	4	FSM	ENSG00000197093.11	ENST00000360039.9	2405	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	12.328828005938	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTTATGGAGGGTG	-100164649	False	3968	-6	True	AATAAA	-15	NA	100168617	100159243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100160960_100166501_100166806_100166970_100167284_100168545
transcript_13158.known	chr1	+	893	2	FSM	ENSG00000116260.17	ENST00000443059.1	893	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTTGTTAAGGCAAGC	180196671	False	NA	17	True	AATAAA	-1	NA	180196681	180198016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180196891_180197332
transcript_131582.known	chr7	-	2546	10	FSM	ENSG00000213420.8	ENST00000292377.4	2546	10	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_7	16.4991582276861	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATGTGTGGCTTCTGTG	-100173413	True	NA	-5	True	AATAAA	-16	NA	100177381	100169605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100170484_100171260_100171437_100171538_100171679_100171778_100171926_100172086_100172218_100173834_100173998_100174684_100174766_100175571_100175895_100176206_100176366_100177033
transcript_131583.known	chr7	-	2007	6	FSM	ENSG00000239521.10	ENST00000414739.3	2007	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	15.6894869259642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAACCTGTCCTCCTTT	-100270962	True	NA	-5	True	AATAAA	-29	NA	100272214	100212021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100213134_100222596_100222721_100223569_100223699_100223881_100224076_100233603_100233675_100271837
transcript_131584.nic	chr7	-	841	4	FSM	ENSG00000239521.10	ENST00000689058.1	856	4	9	6	9	-6	multi-exon	FALSE	canonical	3	53	junction_1	4.24264068711928	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGTGTGGTGGTGCATA	-100270763	False	NA	-6	True	AATACA	-7	NA	100272015	100223300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100223699_100223881_100224076_100233603_100233675_100271837
transcript_131603.known	chr7	-	1244	7	FSM	ENSG00000078319.11	ENST00000675162.2	1822	7	0	578	0	0	multi-exon	FALSE	canonical	3	66	junction_1	111.979784882014	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACATCTCCCCTGGGTCCGGT	-100336245	True	NA	-6	True	AATAAA	-18	NA	100336307	100320913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100325690_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_131605.known	chr7	-	1097	7	FSM	ENSG00000078319.11	ENST00000676204.1	1097	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	141.059089273491	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCCTGGGTCCGGTGTT	-100332448	True	NA	-3	True	AATAAA	-21	NA	100335905	100320910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100325690_100325869_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335674
transcript_131612.known	chr7	-	788	6	FSM	ENSG00000078319.11	ENST00000675610.2	837	6	45	4	-1	0	multi-exon	FALSE	canonical	3	11	junction_1	129.117001204334	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCCCCTGGGTCCGGTG	-100332482	True	NA	-5	True	AATAAA	-19	NA	100335939	100320912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_131621.known	chr7	-	747	6	FSM	ENSG00000078319.11	ENST00000674972.2	779	6	29	3	0	0	multi-exon	FALSE	canonical	3	103	junction_1	103.9838448991	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCAGTTTCCAGTAGTT	-100332493	True	NA	NA	False	ATTAAA	-18	NA	100335950	100325659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100325780_100328835_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_131633.known	chr7	-	2236	5	FSM	ENSG00000078319.11	ENST00000676200.2	2335	5	99	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	138.744369255116	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAAAATACGCCAGACG	-100332423	True	NA	NA	False	ATTAAA	-3	NA	100335880	100319221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_131634.known	chr7	-	586	5	FSM	ENSG00000078319.11	ENST00000686203.1	620	5	34	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	129.825844884599	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCCTGGGTCCGGTGTTC	-100332475	True	NA	-2	True	AATAAA	-22	NA	100335932	100320909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100321085_100325690_100325780_100330462_100330550_100332441_100332582_100335837
transcript_131637.known	chr7	-	537	5	FSM	ENSG00000078319.11	ENST00000675486.2	899	5	105	257	4	-149	multi-exon	FALSE	canonical	3	112	junction_1	93.9893611000735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGTAAATTAATCCTGG	-100332403	True	NA	NA	False	CATAAA	-25	NA	100335860	100328835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100329020_100330181_100330285_100330462_100330550_100332441_100332582_100335837
transcript_131641.known	chr7	+	683	4	FSM	ENSG00000242294.6	ENST00000422479.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	45.7019328548221	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTCCCAAGGTGTGGCT	100331443	True	NA	NA	False	AATAAA	-15	NA	100336124	100341328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100336221_100338178_100338265_100338772_100338890_100340944
transcript_131645.known	chr7	-	551	4	FSM	ENSG00000078319.11	ENST00000688316.1	816	4	51	214	-1	-214	multi-exon	FALSE	canonical	0	0	junction_3	160.15825506875	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGAGCTCACTTTGTGC	-100332451	True	NA	NA	False	NA	NA	NA	100335908	100330207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332577_100335656
transcript_131646.known	chr7	-	604	4	FSM	ENSG00000078319.11	ENST00000675836.2	757	4	63	90	0	2	multi-exon	FALSE	canonical	3	234	junction_3	50.622788017519	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTGTTAAAAAAATTGGT	-100332459	True	NA	NA	False	AATAAA	-21	NA	100335916	100329986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100330285_100330462_100330550_100332441_100332582_100335837
transcript_13165.known	chr1	-	1293	8	FSM	ENSG00000230124.8	ENST00000367595.4	1293	8	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	48.9122496238448	2443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAAGTCTCAGCAATTC	-180500780	True	NA	-15	True	AATAAA	-22	NA	180502577	180288229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_180288518_180314691_180314723_180397515_180397606_180413365_180413472_180430179_180430263_180492268_180492366_180495460_180495526_180502044
transcript_131650.known	chr7	-	2364	18	FSM	ENSG00000078487.18	ENST00000684423.1	2364	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1.455213750218	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTTGGCTGGTCTCTAA	-100423673	False	155	-18	True	AATAAA	-16	NA	100428703	100400871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100401337_100401888_100402042_100402515_100402577_100403693_100403786_100404177_100404245_100405012_100405094_100406693_100406799_100407227_100407304_100408538_100408660_100409427_100409545_100415974_100416098_100416304_100416457_100417065_100417184_100419110_100419190_100419629_100419884_100420621_100420679_100425029_100425137_100428567
transcript_131668.nic	chr7	+	1758	5	NIC	ENSG00000146834.14	novel	2822	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	75.9045453184459	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTCGGTACTGTCT	100427130	True	NA	15	True	AATAAA	-27	NA	100429378	100434118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100429514_100431029_100431690_100432918_100433138_100433262_100433390_100433501
transcript_13167.known	chr1	+	5844	6	FSM	ENSG00000121454.6	ENST00000263726.4	5844	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.81721582889959	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGATGTGTCTTGCTTTT	180229972	True	NA	10	True	AATAAA	-18	NA	180230263	180278984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180230606_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_131675.known	chr7	-	474	2	FSM	ENSG00000160813.7	ENST00000476185.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGGACTCTTCTTGGAGGC	-100431040	False	NA	-33	True	AATAAA	-17	NA	100436070	100435282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100435534_100435847
transcript_131676.known	chr7	-	758	2	FSM	ENSG00000160813.7	ENST00000470295.5	758	2	0	0	0	0	multi-exon	FALSE	canonical	3	1009	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGACTCTTCTTGGAGGCC	-100431106	False	NA	-32	True	AATAAA	-18	NA	100436136	100435281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100435534_100435630
transcript_131677.known	chr7	+	333	2	FSM	ENSG00000241357.1	ENST00000492523.1	333	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGCGGAGTCAGCAGCCC	100435241	False	NA	NA	False	NA	NA	NA	100435256	100436510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100435462_100436382
transcript_131681.known	chr7	-	2318	5	FSM	ENSG00000166925.9	ENST00000300181.7	2318	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_4	19.6389281784928	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-100476896	True	NA	-11	True	ATTAAA	-38	NA	100479214	100466518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100478308_100478793
transcript_131683.nnic	chr7	-	1305	4	NIC	ENSG00000166925.9	novel	2318	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_3	54.0514158515349	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAGGTTGACATCTCGT	-100476914	True	NA	-11	True	ATTAAA	-38	NA	100479232	100466518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_100467169_100467551_100467601_100474273_100474441_100478793
transcript_131684.known	chr7	-	1469	5	FSM	ENSG00000166925.9	ENST00000393991.5	1469	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	40.904614654095	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAGAAACTTGAAT	-100476914	True	NA	-30	True	ATTAAA	-19	NA	100479232	100466537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100467169_100467551_100467601_100474273_100474441_100477276_100477460_100478793
transcript_131687.known	chr7	-	3177	18	FSM	ENSG00000077454.17	ENST00000310300.11	3177	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_11	27.7759199686312	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTCTGAGAGCACGTGC	-100580988	True	NA	-5	True	AATAAA	-39	NA	100586129	100574010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100575305_100575704_100575783_100575870_100576009_100576237_100576324_100576693_100576778_100576901_100577006_100577085_100577155_100577272_100577390_100577496_100577559_100577663_100577741_100577821_100577913_100578158_100578259_100578398_100578512_100578649_100578787_100581776_100581883_100582040_100582168_100582314_100582460_100585880
transcript_131694.known	chr7	+	1516	9	FSM	ENSG00000106333.13	ENST00000223061.6	1516	9	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	63.1402209372124	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTCAGATCTCCATGCTT	100601011	True	NA	8	True	AATAAA	-18	NA	100602362	100608175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100602552_100603429_100603539_100603958_100604218_100605090_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_13170.nnic	chr1	+	1890	6	NNC	ENSG00000121454.6	novel	603	4	NA	NA	6976	3159	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	11.5412304370028	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGAACCCTATATTTC	180237147	True	NA	9	True	AATAAA	-19	NA	180237273	180275053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_180237593_180248284_180248457_180266391_180266595_180271379_180271535_180271834_180272007_180274184
transcript_131709.nnic	chr7	+	1275	7	NNC	ENSG00000106333.13	novel	960	4	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	90.2079387982134	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGGTCAGATCTCCAT	100604246	False	NA	4	True	AATAAA	-14	NA	100604282	100608171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100604503_100604990_100605216_100605675_100605813_100606415_100606631_100607451_100607524_100607636_100607808_100607936
transcript_13171.known	chr1	+	8484	15	FSM	ENSG00000143324.14	ENST00000367590.9	8484	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_12	14.6419860368066	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTGACTGTTTTT	180624409	True	NA	57	True	NA	NA	NA	180632021	180890279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180836521_180836717_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_131726.known	chr7	-	987	5	FSM	ENSG00000205307.12	ENST00000614631.4	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	12.852528934027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAATAAAACAGTGTTGGT	-100573573	False	NA	-31	True	NA	NA	NA	100573608	100572255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100572572_100572653_100572752_100572859_100573014_100573105_100573213_100573296
transcript_131739.known	chr7	-	668	2	FSM	ENSG00000205307.12	ENST00000611464.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGACCCCAGACACCCA	-100573031	False	NA	-92	True	NA	NA	NA	100573066	100572316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100572572_100572653
transcript_13174.nnic	chr1	-	358	2	Antisense	novelGene_ENSG00000143324.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGCTTATTTCTTTTT	-180872819	True	NA	NA	False	ATTAAA	-25	NA	180872843	180860540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_180860801_180872745
transcript_131745.known	chr7	+	1053	6	FSM	ENSG00000106330.12	ENST00000223054.8	1053	6	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	97.9109799767115	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTGTACTCATTTTCCA	100612090	False	NA	-39	True	AAAACA	-6	NA	100612101	100615326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612242_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_131747.known	chr7	+	1016	6	FSM	ENSG00000106330.12	ENST00000379527.6	1016	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	152.911739248496	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATCAGAAATGTAGGGTA	100611692	False	NA	8	True	AATAAA	-17	NA	100612429	100615373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612486_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_131749.nnic	chr7	+	1099	6	NNC	ENSG00000106330.12	novel	1154	5	NA	NA	38	0	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	141.902219855787	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611730	False	NA	12	True	AATAAA	-21	NA	100612467	100615377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_100612603_100612729_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_131754.known	chr7	+	1154	5	FSM	ENSG00000106330.12	ENST00000393950.7	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	30.2438010177292	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAATGTAGGGTACTTG	100611286	True	NA	12	True	AATAAA	-21	NA	100612539	100615377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612997_100613193_100613270_100613476_100613707_100614866_100615032_100615151
transcript_131755.known	chr7	+	1115	5	FSM	ENSG00000106330.12	ENST00000424091.2	1115	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	159.00687878202	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGGTACTTGCCCCTGT	100611302	True	NA	19	True	AATAAA	-28	NA	100612555	100615384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612997_100613193_100613270_100613506_100613707_100614866_100615032_100615151
transcript_13176.known	chr1	+	4126	14	FSM	ENSG00000143324.14	ENST00000367589.3	4126	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_10	44.2877893332199	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTTAACAATTTAGTG	180624419	True	NA	NA	False	AATAAA	-19	NA	180632031	180886126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180632271_180682359_180682412_180787752_180787855_180803387_180803612_180806061_180806212_180806473_180806558_180811406_180811489_180824752_180824944_180825164_180825345_180834873_180835046_180863707_180863875_180873802_180873943_180880075_180880298_180884005
transcript_131760.known	chr7	+	571	3	FSM	ENSG00000106330.12	ENST00000497456.1	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	36	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTCCTGGTTCAGTCT	100612785	False	NA	NA	False	GATAAA	-12	NA	100612814	100613789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100612997_100613193_100613270_100613476
transcript_131763.known	chr7	-	2421	15	FSM	ENSG00000106327.13	ENST00000476304.5	2421	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	4.86134272204959	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGTGGAGTTTCAATATC	-100633556	True	NA	NA	False	NA	NA	NA	100633650	100620462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100621127_100626762_100626904_100627263_100627492_100627576_100627662_100627743_100627821_100627906_100627975_100628072_100628137_100628223_100628307_100629252_100629373_100630888_100631053_100631805_100631946_100632081_100632199_100633000_100633124_100633228_100633341_100633415
transcript_131766.known	chr7	-	610	3	FSM	ENSG00000106327.13	ENST00000475011.1	610	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	3	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCTCTACTAAAAAAAAAAA	-100633464	True	NA	NA	False	NA	NA	NA	100633558	100632768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100633124_100633228_100633341_100633415
transcript_131768.known	chr7	-	1524	14	FSM	ENSG00000077080.10	ENST00000160382.10	1524	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.1392317197408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	100656448	100643096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222_100647285_100647443_100647534_100648555_100648663_100648728_100648824_100650037_100650136_100655018_100655120_100655420_100655587_100655802_100655880_100656329
transcript_131771.nic	chr7	-	781	6	ISM	ENSG00000077080.10	ENST00000160382.10	1524	14	9054	0	344	0	3prime_fragment	FALSE	canonical	3	12	junction_5	6.62117814289874	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	100647394	100643096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647086_100647222
transcript_131772.nic	chr7	-	784	6	ISM	ENSG00000077080.10	ENST00000487125.1	947	7	367	-45	367	0	3prime_fragment	FALSE	canonical	2	2	junction_5	10.3072789813801	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTCCGTGGGGTGG	NA	False	NA	NA	False	AGTAAA	-20	NA	100647371	100643096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100643327_100646248_100646336_100646550_100646647_100646750_100646832_100646970_100647112_100647222
transcript_131777.known	chr7	+	1664	10	FSM	ENSG00000172354.10	ENST00000303210.9	1664	10	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_1	112.494938157728	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTCTGCCCTTGCTG	100669388	True	NA	29	True	CATAAA	-22	NA	100673739	100679169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100673924_100676176_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_131778.known	chr7	+	1524	9	FSM	ENSG00000172354.10	ENST00000393924.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	72.3583746017004	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGCCCTTGCTGTGTTC	100675690	True	NA	34	True	CATAAA	-27	NA	100676137	100679174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100676323_100676534_100676574_100676692_100676800_100677351_100677416_100677497_100677661_100677751_100677819_100678097_100678300_100678397_100678615_100678694
transcript_131785.known	chr7	+	850	2	FSM	ENSG00000172336.5	ENST00000303151.5	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_1	0	4803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCCATCCCACTGCCA	100692697	True	NA	17	True	AATAAA	-19	NA	100706120	100707486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100706305_100706820
transcript_131787.known	chr7	+	483	2	FSM	ENSG00000172336.5	ENST00000457480.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACCCAAGTAATTGAAAAGA	100706270	False	NA	NA	False	NA	NA	NA	100706335	100707242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100706397_100706820
transcript_131791.known	chr7	+	3315	14	FSM	ENSG00000146828.18	ENST00000354161.8	3315	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	24.0083811795778	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCTGAGCAGTGCT	100850419	True	NA	14	True	AATAAA	-15	NA	100852712	100867010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100852836_100854155_100854379_100854619_100854755_100855705_100855838_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_131795.nic	chr7	+	2831	11	NIC	ENSG00000146828.18	novel	3315	14	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	21.4280190404993	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGCTGAGCAGTGCT	100850413	True	NA	14	True	AATAAA	-15	NA	100852706	100867010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_100852836_100856867_100857177_100858834_100858943_100859049_100859162_100859884_100860043_100860149_100860233_100861137_100861263_100861391_100861585_100861736_100861912_100862680_100862828_100865718
transcript_13181.known	chr1	-	4810	8	FSM	ENSG00000135823.14	ENST00000258301.6	4810	8	0	0	0	0	multi-exon	FALSE	canonical	1	125	junction_6	100.147646105179	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAACTTGAAAAGGACTGA	-181012011	True	NA	-9	True	AATAAA	-16	NA	181022870	180972724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181002605_181002701_181005293_181005464_181022638
transcript_131815.known	chr7	-	369	2	FSM	ENSG00000236305.2	ENST00000412754.2	388	2	19	0	19	0	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTCTGACCTGCCTCC	-100852221	True	NA	NA	False	NA	NA	NA	100852616	100837313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100837580_100852513
transcript_131816.nnic	chr7	-	348	2	NNC	ENSG00000236305.2	novel	276	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGAGTTCAGTGAGCA	-100852265	True	NA	-1	True	CATAAA	-19	NA	100852660	100851979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_100852132_100852464
transcript_131817.nnic	chr7	-	318	2	FSM	ENSG00000236305.2	ENST00000684935.1	276	2	-42	0	-42	0	multi-exon	FALSE	canonical	1	1	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGTGAGTTCAGTGAGCA	-100852284	False	NA	-1	True	CATAAA	-19	NA	100852679	100851979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100852132_100852513
transcript_131822.known	chr7	+	1693	9	FSM	ENSG00000087077.14	ENST00000200457.9	1693	9	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	63.1050711115993	813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAAGTCTGTTGTCTCA	100859670	True	NA	15	True	AAGAAA	-27	NA	100867386	100873454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100867607_100867860_100867989_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_131835.known	chr7	+	1303	8	FSM	ENSG00000087077.14	ENST00000619988.4	1303	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	268.012488286555	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCCTAGAAGTACCTGC	100859781	False	NA	NA	False	NA	NA	NA	100867497	100873303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100867607_100868107_100868234_100868494_100868867_100870369_100870464_100870573_100870744_100871542_100871722_100872623_100872745_100873171
transcript_131842.known	chr7	+	2990	20	FSM	ENSG00000087087.20	ENST00000611405.5	2990	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	238.560154611832	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858191	True	NA	19	True	AATAAA	-16	NA	100875102	100888664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
transcript_131843.known	chr7	+	2955	20	FSM	ENSG00000087087.20	ENST00000618262.4	2955	20	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_17	184.710314484623	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858214	True	NA	19	True	AATAAA	-16	NA	100875125	100888664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885212_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_131844.known	chr7	+	2964	20	FSM	ENSG00000087087.20	ENST00000614484.4	2964	20	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	243.203937313222	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858214	True	NA	19	True	AATAAA	-16	NA	100875125	100888664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888041_100888144_100888256_100888384_100888473
transcript_131845.known	chr7	+	2893	20	FSM	ENSG00000087087.20	ENST00000618411.4	2893	20	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_17	190.937633942085	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGACTCTCGTGTGTTA	100858273	True	NA	19	True	AATAAA	-16	NA	100875184	100888664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100875329_100875572_100875713_100881284_100881414_100881658_100881806_100882052_100882242_100884069_100884240_100884367_100884553_100884739_100884839_100884922_100885041_100885215_100885371_100885700_100885763_100885862_100885942_100886246_100886436_100886794_100886969_100887046_100887201_100887319_100887514_100887702_100887860_100888053_100888144_100888256_100888384_100888473
transcript_131861.known	chr7	-	995	1	FSM	ENSG00000176125.7	ENST00000388761.4	995	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAGGAGTTACTCTGGAA	-100889307	True	NA	-18	True	AATAAA	-21	NA	100889715	100888720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_100888700_100889700
transcript_131862.nic	chr7	-	652	2	ISM	ENSG00000087085.16	ENST00000412389.5	2218	4	2910	-3	2755	0	3prime_fragment	FALSE	canonical	3	30	junction_1	0	203	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100891295	False	NA	-4	True	AATAAA	-13	NA	100891478	100889993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100890336_100891168
transcript_131863.nic	chr7	-	1405	2	ISM	ENSG00000087085.16	ENST00000411582.4	2928	5	4410	0	2755	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGAGTGTGCGCGACTAGG	-100891295	False	NA	-4	True	AATAAA	-13	NA	100891478	100889993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100891089_100891168
transcript_131864.nic	chr7	-	683	2	ISM	ENSG00000087085.16	ENST00000411582.4	2928	5	4410	722	2755	-505	3prime_fragment	FALSE	canonical	3	20	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGCCTGACATTGGGGG	-100891295	False	NA	-4	True	TATAAA	-15	NA	100891478	100890715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_100891089_100891168
transcript_13187.known	chr1	-	4809	6	FSM	ENSG00000135823.14	ENST00000542060.5	4809	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	156.715538476566	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACTGAATTACTAGAATGA	NA	False	NA	4	True	AATAAA	-29	NA	181023121	180972711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_180976647_180984676_180984772_180988238_180988346_180989983_180990110_180993362_180993426_181022638
transcript_131875.nnic	chr7	+	537	3	Intergenic	novelGene_59	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTCACATGAAAACATGAGA	NA	False	NA	NA	False	AATAAA	-17	NA	100922505	100942998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_131876.nnic	chr7	+	966	3	Intergenic	novelGene_60	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	2.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	NA	False	NA	5	True	AATAAA	-21	NA	100922505	100943427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_131877.nnic	chr7	+	1239	3	Intergenic	novelGene_61	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	10	junction_1	2.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACATATAGTCTCCTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	100922505	100943700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924559_100924691_100942903
transcript_131879.nnic	chr7	+	900	3	Intergenic	novelGene_62	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	6	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATCTTAAGAGGCATTTAA	NA	False	NA	5	True	AATAAA	-21	NA	100922518	100943427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924612_100924691_100942903
transcript_131880.nnic	chr7	+	1173	3	Intergenic	novelGene_63	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	6	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATACATATAGTCTCCTAA	NA	False	NA	NA	False	ATTAAA	-22	NA	100922518	100943700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_100922817_100924612_100924691_100942903
transcript_13189.known	chr1	+	363	2	FSM	ENSG00000135835.12	ENST00000496210.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTTTATGGTGAATAC	180913130	False	NA	16	True	AATAAA	-27	NA	180913153	180914056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_180913294_180913833
transcript_131891.nic	chr7	+	1461	3	ISM	ENSG00000169894.18	ENST00000614399.1	1093	4	325	-601	325	0	3prime_fragment	FALSE	canonical	3	439	junction_2	28	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCTCTGTCTGTCTCC	100965898	False	NA	24	True	AATACA	-20	NA	100966562	100968347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_100966744_100966898_100966952_100967120
transcript_131892.known	chr7	+	11248	12	FSM	ENSG00000169894.18	ENST00000379458.9	11248	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_5	191.837181308086	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCTCTCTGTCTGTCTCC	100949508	True	NA	24	True	AATACA	-20	NA	100949533	100968347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100949686_100951840_100960646_100960751_100960938_100963150_100963267_100963687_100963753_100964694_100964844_100965281_100965348_100965703_100965867_100966385_100966560_100966651_100966744_100966898_100966952_100967120
transcript_131894.known	chr7	+	1093	4	FSM	ENSG00000169894.18	ENST00000614399.1	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_1	52.8162432927178	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCATCCTGCACCCCAGT	100965985	True	NA	NA	False	NA	NA	NA	100966237	100967746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_100966560_100966651_100966744_100966898_100966952_100967120
transcript_13190.known	chr1	+	2043	5	FSM	ENSG00000153029.16	ENST00000282990.10	2043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCCTTAATGTTCCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	181034002	181056553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_181034075_181049051_181049313_181050010_181050287_181053572_181053678_181055224
transcript_131900.nnic	chr7	-	598	4	NNC	ENSG00000227053.2	novel	442	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.006171781426	142	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	-101017122	True	NA	-1	True	AATAAA	-21	NA	101017653	101014319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101014440_101015197_101015268_101015439_101015609_101017414
transcript_131901.nnic	chr7	-	674	4	NNC	ENSG00000227053.2	novel	442	3	NA	NA	-1223	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.2703943940144	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	101018888	101014319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101014440_101015197_101015268_101015439_101015609_101018573
transcript_131906.known	chr7	+	502	3	FSM	ENSG00000205277.10	ENST00000473098.5	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	14	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101016790	False	NA	16	True	AATAAA	-22	NA	101016877	101018939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101016946_101017574_101017664_101018594
transcript_131908.nnic	chr7	+	630	3	NNC	ENSG00000205277.10	novel	502	3	NA	NA	62	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	101016852	False	NA	13	True	AATAAA	-19	NA	101016939	101018936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_101017139_101017574_101017664_101018594
transcript_131909.known	chr7	+	566	3	FSM	ENSG00000205277.10	ENST00000467414.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	101017081	True	NA	13	True	AATAAA	-19	NA	101017262	101018936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101017398_101017574_101017664_101018594
transcript_13191.known	chr1	-	4065	7	FSM	ENSG00000135821.19	ENST00000417584.6	4065	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	519.042949411061	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACTTTGGATTTTGTTCA	-182391392	False	NA	NA	False	ACTAAA	-20	NA	182391404	182381704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391174
transcript_131910.nnic	chr7	+	661	3	NNC	ENSG00000205277.10	novel	566	3	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	25.5	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAGAAGTGAGAGGTTT	101017117	False	NA	13	True	AATAAA	-19	NA	101017204	101018936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_101017435_101017574_101017664_101018594
transcript_131911.known	chr7	-	372	3	FSM	ENSG00000227053.2	ENST00000448513.2	442	3	64	6	7	-5	multi-exon	FALSE	canonical	3	23	junction_2	10	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTACCCAGTGGTGGTATT	-101017070	True	NA	-6	True	AATAAA	-16	NA	101017601	101014324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101014440_101015197_101015268_101017414
transcript_131912.nnic	chr7	-	660	3	NNC	ENSG00000227053.2	novel	442	3	NA	NA	-1378	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	19.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTGGTATTCTGTT	NA	False	NA	-1	True	AATAAA	-21	NA	101019043	101014319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101014440_101015197_101015268_101018573
transcript_131913.known	chr7	+	675	2	FSM	ENSG00000205277.10	ENST00000474482.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAAGTGAGAGGTTTCCT	101017152	False	NA	16	True	AATAAA	-22	NA	101017333	101018939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101017664_101018594
transcript_131914.known	chr7	+	3156	9	FSM	ENSG00000106366.9	ENST00000223095.5	3156	9	0	0	0	0	multi-exon	TRUE	canonical	2	11	junction_3	3.07205143186113	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATATGTCAGGACAGTCAC	101126983	True	NA	10	True	AATAAA	-16	NA	101127103	101139247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101127245_101128392_101128665_101130420_101130655_101131874_101132070_101133694_101133894_101135493_101135595_101135714_101135802_101137000_101137085_101137404
transcript_131915.known	chr7	+	1226	5	FSM	ENSG00000106367.15	ENST00000337619.11	1226	5	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	40.3260151763102	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGCTGGCCTTGGGCTCT	101148317	True	NA	12	True	AATAAA	-19	NA	101154475	101161276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101154518_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_131917.known	chr7	+	573	5	FSM	ENSG00000106367.15	ENST00000429457.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	107.728826225853	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGCTGGAGGAGATGGGT	101148366	False	NA	NA	False	NA	NA	NA	101154524	101160537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101154653_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_13192.known	chr1	-	7554	7	FSM	ENSG00000135821.19	ENST00000331872.11	7554	7	0	0	0	0	multi-exon	FALSE	canonical	3	1285	junction_2	108.651839479239	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTCTCTGTGACTCTGTT	-182385778	True	NA	NA	False	AATAAA	-14	NA	182391790	182378097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182384724_182385356_182385557_182385759_182385888_182386255_182386403_182387130_182387293_182388571_182388751_182391678
transcript_131920.known	chr7	+	779	5	FSM	ENSG00000106367.15	ENST00000646560.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	117.22734322674	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCCTGCCTTTGCAGAA	101154911	True	NA	NA	False	NA	NA	NA	101154984	101160827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101155029_101156593_101156773_101157376_101157486_101159058_101159197_101160518
transcript_131929.nnic	chr7	-	1033	2	NNC	ENSG00000205267.5	novel	744	5	NA	NA	983	426	intron_retention	FALSE	canonical	3	8	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCAGCCTGTGTGTGTTT	-101202531	False	NA	-5	True	ATTAAA	-13	NA	101202543	101201382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101202016_101202143
transcript_131930.nnic	chr7	-	825	2	NNC	ENSG00000205267.5	novel	744	5	NA	NA	983	218	intron_retention	FALSE	canonical	3	8	junction_1	0	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAATTAGCCAGACG	-101202531	False	NA	NA	False	ATTAAA	-17	NA	101202543	101201590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101202016_101202143
transcript_131932.known	chr7	-	2821	19	FSM	ENSG00000106397.12	ENST00000223127.8	2821	19	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_7	18.7077095086953	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGAGTCCATTGGTCTG	-101216079	True	NA	-11	True	AATAAA	-14	NA	101217581	101205983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101206437_101206778_101206905_101207577_101207725_101208852_101208958_101210092_101210162_101210330_101210445_101210531_101210674_101211590_101211717_101211845_101211951_101212252_101212375_101212529_101212656_101212841_101212944_101213106_101213205_101215088_101215153_101215907_101216021_101216162_101216327_101216409_101216547_101216694_101216787_101217165
transcript_131948.known	chr7	+	728	5	FSM	ENSG00000106400.12	ENST00000305105.3	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_1	165.808624624897	14905	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCTGTTTGGTCGTGG	101206560	True	NA	15	True	AATAAA	-17	NA	101218164	101224190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101218218_101222603_101222775_101223476_101223557_101223672_101223843_101223936
transcript_131968.known	chr7	-	1005	5	FSM	ENSG00000214253.9	ENST00000473527.5	1005	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	265.854283395999	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTGTCTGCGTTGAGG	-101251197	True	NA	-4	True	AATAAA	-21	NA	101252291	101239611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101251894
transcript_131970.known	chr7	-	731	4	FSM	ENSG00000214253.9	ENST00000482199.5	731	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	304.992896092133	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCACTCCTGGTCCTCTCC	-101228568	False	NA	56	True	NA	NA	NA	101241785	101239551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101241589
transcript_131971.known	chr7	-	530	4	FSM	ENSG00000214253.9	ENST00000480497.1	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	302.637663808647	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCCCCCGTCTCTATCCT	-101243637	False	13217	NA	False	NA	NA	NA	101244731	101239731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244556
transcript_131972.known	chr7	-	631	4	FSM	ENSG00000214253.9	ENST00000442303.1	631	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	304.521847419123	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCTGCGTTGAGGGGAGG	-101231831	True	NA	1	True	AATAAA	-26	NA	101245048	101239606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244897
transcript_131974.known	chr7	-	915	4	FSM	ENSG00000214253.9	ENST00000474120.5	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	284.267870541541	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGAGGGGTGGGTTCTGAA	-101251222	True	NA	14	True	AATAAA	-39	NA	101252316	101239593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101251894
transcript_131977.known	chr7	-	870	5	FSM	ENSG00000214253.9	ENST00000223136.5	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_3	78.1040972036679	5216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTCCTTCCTCCCTTTCC	-101231864	True	NA	NA	False	NA	NA	NA	101245081	101239471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244006_101244140_101244959
transcript_131978.known	chr7	-	745	4	FSM	ENSG00000214253.9	ENST00000449367.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	248.476692401253	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGAAGCCATGTCCT	-101231858	True	NA	NA	False	NA	NA	NA	101245075	101239457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101239904_101240141_101240248_101240829_101240907_101244959
transcript_131979.known	chr7	-	345	2	FSM	ENSG00000214252.4	ENST00000454506.2	345	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGTGAACAACAGACCGCG	-101289543	True	NA	NA	False	NA	NA	NA	101289771	101287481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101287744_101289688
transcript_131983.nnic	chr7	+	1097	3	Fusion	ENSG00000232301.3_ENSG00000288749.1	novel	826	2	NA	NA	-5	-16	multi-exon	FALSE	canonical	2	27	junction_1	484	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTTTGAGATGATCAA	101289323	True	NA	14	True	ATTAAA	-16	NA	101299552	101304562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_101299867_101302798_101303029_101304009
transcript_131988.known	chr7	+	867	2	FSM	ENSG00000232301.3	ENST00000429254.3	887	2	20	0	20	0	multi-exon	FALSE	canonical	3	765	junction_1	0	4746	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTCGATTTTGCAAGAT	101289348	True	NA	12	True	AATAAA	-17	NA	101299577	101301346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101299867_101300768
transcript_13199.known	chr1	-	2408	5	FSM	ENSG00000143333.7	ENST00000367558.6	2408	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	19.536824204563	218	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGTCTTCAAGTGCTG	-182603063	True	NA	-1	True	AATAAA	-19	NA	182604389	182598622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_182600514_182601965_182602133_182602419_182602485_182603228_182603340_182604215
transcript_131995.known	chr7	-	4881	5	FSM	ENSG00000128581.17	ENST00000315322.10	4881	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_3	18.6731759484026	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAGTTTTGAGAGTT	-101319978	True	NA	-6	True	ATTAAA	-26	NA	101321812	101310913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319033_101321670
transcript_131996.known	chr7	-	933	5	FSM	ENSG00000128581.17	ENST00000430911.5	933	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	78.654306938654	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATTTACCACCTCACATA	-101319963	True	NA	NA	False	NA	NA	NA	101321797	101314877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101318955_101319064_101321670
transcript_132004.known	chr7	-	917	4	FSM	ENSG00000128581.17	ENST00000498704.6	917	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	75.4733212613717	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAACAAATACCGACTGGC	-101319930	True	NA	-25	True	NA	NA	NA	101321764	101314752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101318214_101321670
transcript_132005.known	chr7	-	1727	4	FSM	ENSG00000128581.17	ENST00000440362.5	1727	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	16.539514973407	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGCTTGAATGTGATTT	-101319956	True	NA	-60	True	NA	NA	NA	101321790	101314787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318123_101319033_101321670
transcript_132006.known	chr7	-	875	4	FSM	ENSG00000128581.17	ENST00000437644.2	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	81.1842896679455	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACGTGTATTGGCTTGAAT	-101319943	True	NA	-67	True	NA	NA	NA	101321777	101314794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101318955_101319033_101321670
transcript_132008.nic	chr7	-	523	4	ISM	ENSG00000128581.17	ENST00000422177.5	1785	6	-20	2637	-2	-506	5prime_fragment	FALSE	canonical	3	165	junction_2	14.9888847706114	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAATTTCTCTTCCTCTT	-101319980	True	NA	3	True	GATAAA	-26	NA	101321814	101316330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_101316543_101318123_101318214_101318955_101319033_101321670
transcript_13201.known	chr1	+	1376	1	FSM	ENSG00000261504.1	ENST00000566297.1	1376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGTGCCTGTTTATAT	182615210	False	NA	14	True	AATAAA	-17	NA	182615253	182616629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182615300_182616600
transcript_132026.nnic	chr7	+	1089	3	NNC	ENSG00000232445.2	novel	1194	3	NA	NA	-10	698	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	240	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGTGATTCTGTACATTA	101308236	False	NA	14	True	AATAAA	-17	NA	101308259	101312041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_101308549_101310483_101311121_101311878
transcript_132027.known	chr7	+	1194	3	FSM	ENSG00000232445.2	ENST00000419422.2	1194	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	1.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTTGAGGTGGTCAA	101297684	True	NA	10	True	ATTAAA	-17	NA	101308295	101311343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101308549_101309613_101309695_101310483
transcript_132028.known	chr7	-	567	3	FSM	ENSG00000128581.17	ENST00000495166.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	101	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATCACATCCAGCTCCTG	-101319989	True	NA	NA	False	NA	NA	NA	101321823	101315071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101315283_101316339_101316543_101321670
transcript_13203.known	chr1	+	2543	13	FSM	ENSG00000135838.14	ENST00000367553.6	2543	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	8.42450130406674	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGCTTTTGTGAAGTCA	182789062	True	NA	NA	False	AATAAA	-19	NA	182789772	182830384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182789806_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_132030.known	chr7	-	923	3	FSM	ENSG00000128581.17	ENST00000485695.1	923	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	68.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTACTCAGGAGGCTGAG	-101319951	True	NA	NA	False	AATACA	-38	NA	101321785	101315824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101316543_101318123_101318214_101321670
transcript_132033.known	chr7	+	4596	2	FSM	ENSG00000232445.2	ENST00000663483.1	4596	2	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	0	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTGTATCATTGGGCT	101297658	True	NA	NA	False	ATTAAA	-2	NA	101308269	101314800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101308549_101310483
transcript_132034.known	chr7	-	1170	2	FSM	ENSG00000128581.17	ENST00000468833.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAGAAGACCTGGAAAG	-101319956	True	NA	NA	False	AATAGA	-23	NA	101321790	101315492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_101316543_101321670
transcript_132036.known	chr7	+	2978	13	FSM	ENSG00000160963.14	ENST00000313669.12	2978	13	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_2	48.7125212057662	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357067	True	NA	19	True	AATAAA	-15	NA	101362874	101559024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101363191_101419976_101420100_101447683_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_132037.known	chr7	+	2970	13	FSM	ENSG00000160963.14	ENST00000613501.1	2970	13	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	48.7125212057662	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTCTGTTTGTGTGGT	101357069	True	NA	19	True	AATAAA	-15	NA	101362876	101559024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101363191_101419976_101420100_101447689_101447788_101533081_101533144_101539892_101540050_101543997_101544097_101545337_101545491_101547155_101547240_101549170_101549224_101551107_101551144_101553325_101553377_101555786_101555872_101557369
transcript_132038.nnic	chr7	-	838	7	NNC	ENSG00000106436.7	novel	1004	8	NA	NA	2707	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.816496580927726	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTTTGTGCGGTAAAT	-101624793	True	NA	NA	False	AATAAA	-15	NA	101624817	101613329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_101613574_101613661_101613711_101616219_101616299_101622095_101622201_101622996_101623073_101624171_101624265_101624625
transcript_132041.known	chr7	+	2929	23	FSM	ENSG00000257923.12	ENST00000622516.6	2929	23	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_18	30.189621116213	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	101812596	True	NA	13	True	AATAAA	-16	NA	101816006	102283958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178468_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_132042.known	chr7	+	3026	23	FSM	ENSG00000257923.12	ENST00000437600.9	3026	23	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_10	38.1300785805902	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGCCCTGTGCTCTG	101815620	False	NA	13	True	AATAAA	-16	NA	101815903	102283958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102158559_102158609_102170445_102170551_102178474_102178658_102189812_102189872_102193841_102193891_102195506_102195604_102273365_102273494_102274243_102274311_102275246_102275360_102277948_102278066_102280036_102280121_102280803_102280861_102281839_102281921_102282711_102282777_102283020
transcript_132043.nic	chr7	+	1104	9	NIC	ENSG00000257923.12	novel	13651	22	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	72.3286768854512	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCATGCAGTCTCAGC	101815601	False	NA	NA	False	TATAAA	-38	NA	101815884	102125778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697_102111775_102115206_102115274_102125527
transcript_132046.known	chr7	+	947	7	FSM	ENSG00000257923.12	ENST00000497815.5	947	7	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	13.1497781983829	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACACGCCATCCTTGCT	101812549	True	NA	NA	False	NA	NA	NA	101815959	102112010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114_101916226_102028097_102028146_102070338_102070418_102097363_102097502_102104335_102104460_102111697
transcript_132050.known	chr7	+	559	2	FSM	ENSG00000257923.12	ENST00000607092.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGTGGGGTGGAAGGTC	101812597	True	NA	NA	False	NA	NA	NA	101816007	101916587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_101816094_101916114
transcript_132055.known	chr7	+	2159	6	FSM	ENSG00000128563.13	ENST00000397912.3	2159	6	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	23.1948270094864	595	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGAAACCTGTTTTTC	102393832	True	NA	7	True	AATAAA	-22	NA	102396362	102426666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102396538_102397619_102397699_102399547_102399649_102404597_102404684_102407433_102407499_102425013
transcript_132059.known	chr7	+	491	5	FSM	ENSG00000239969.6	ENST00000484974.5	491	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	39.8057784749903	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGGTCTCATCATTATC	102364129	False	NA	37	True	TATAAA	-40	NA	102364161	102380633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102364207_102366017_102366077_102375822_102375950_102376211_102376323_102380484
transcript_13206.nnic	chr1	+	1285	13	NNC	ENSG00000135838.14	novel	2543	13	NA	NA	-1	-653	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	10.3638661812194	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAGCATTGAGGTACCT	182789061	True	NA	NA	False	AATAAA	-24	NA	182789771	182829026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_182789905_182792231_182792287_182794355_182794440_182803697_182803772_182806144_182806233_182812155_182812214_182814782_182814859_182816713_182816807_182818540_182818690_182818812_182818860_182822114_182822200_182825780_182825821_182828723
transcript_132061.known	chr7	+	602	5	FSM	ENSG00000239969.6	ENST00000492837.1	602	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	33.6191909480285	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACACTTGGTCTCATCATTA	102364265	False	NA	35	True	TATAAA	-38	NA	102364297	102380631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102364412_102365973_102366077_102375822_102375950_102376211_102376323_102380484
transcript_132069.known	chr7	+	10747	4	FSM	ENSG00000160991.17	ENST00000495936.7	10747	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	7.54247233265651	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCCATTTTTTTTTTTT	102431858	True	NA	NA	False	AATAAA	-19	NA	102433574	102456825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102433662_102436224_102436334_102438943_102439182_102446512
transcript_132070.known	chr7	-	1405	3	FSM	ENSG00000160993.4	ENST00000490528.1	1405	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	55	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGAACATTTTAAATGATT	-102463566	True	NA	NA	False	NA	NA	NA	102464863	102456833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102457982_102459603_102459711_102464713
transcript_132071.known	chr7	-	2092	3	FSM	ENSG00000160993.4	ENST00000292566.4	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	26.5	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCTCACCTCCCACTACA	-102463566	True	NA	-20	True	AATAAA	-20	NA	102464863	102456237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102457982_102459603_102459802_102464713
transcript_132084.known	chr7	-	932	4	FSM	ENSG00000005075.16	ENST00000292614.10	937	4	15	-10	15	10	multi-exon	FALSE	canonical	3	2609	junction_3	82.8908251188809	5235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCCATCGGCCCAAAGC	-102468978	True	NA	-1	True	AATAAA	-25	NA	102478907	102473117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102473685_102474360_102474536_102476180_102476271_102478807
transcript_132085.known	chr7	+	2160	15	FSM	ENSG00000161036.13	ENST00000292616.10	2160	15	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_9	26.4074239716093	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTGGAAAGGTGTTTCG	102461486	True	NA	19	True	ATTAAA	-19	NA	102464983	102473168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102465161_102465816_102466052_102466153_102466271_102467338_102467480_102467718_102467824_102468061_102468188_102468262_102468378_102468553_102468655_102468854_102469063_102469573_102469647_102469741_102469883_102472217_102472310_102472453_102472610_102472691_102472805_102472908
transcript_132096.known	chr7	-	1598	9	FSM	ENSG00000168255.20	ENST00000379340.9	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	571.380113737781	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102572371	True	NA	-19	True	AATAAA	-16	NA	102572539	102537918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102568009_102568185_102569834_102569925_102572471
transcript_132102.known	chr7	-	1598	9	FSM	ENSG00000267645.5	ENST00000476151.5	1598	9	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	249.234797680821	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATAAATGCCCCCAAAA	-102670447	True	NA	-25	True	NA	NA	NA	102671641	102637048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102666076_102666164_102667089_102667265_102668914_102669005_102671551
transcript_132105.known	chr7	-	1532	8	FSM	ENSG00000168255.20	ENST00000486319.5	1532	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_2	147.812622697019	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTGTCCGTGACATC	-102572481	True	NA	-20	True	AATAAA	-15	NA	102572649	102537919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102538526_102539605_102539727_102540014_102540092_102541092_102541304_102541500_102541663_102566996_102567084_102569834_102569925_102572471
transcript_132107.known	chr7	-	2787	20	FSM	ENSG00000105808.19	ENST00000449970.6	2787	20	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	15.6615873575943	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCTGGGGTCTTGT	-102616711	True	NA	NA	False	AGTAAA	-14	NA	102616756	102582324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102582893_102583003_102583069_102584217_102584339_102587634_102587771_102592284_102592455_102592993_102593139_102593706_102593845_102594049_102594243_102594446_102594560_102595304_102595370_102595633_102595785_102596011_102596130_102599859_102599955_102600256_102600389_102602323_102602406_102605857_102605988_102608760_102608823_102609340_102609455_102611085_102611143_102616624
transcript_132114.nnic	chr7	-	1352	7	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	-67	24	combination_of_known_splicesites	FALSE	canonical	1	8	junction_4	190.63898400438	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670514	True	NA	-1	True	AATAAA	-16	NA	102671708	102637024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102666076_102666164_102668914_102669005_102671551
transcript_132123.nnic	chr7	-	1204	6	NIC	ENSG00000267645.5	novel	1598	9	NA	NA	-130	24	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	203.950386123685	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	-102670577	True	NA	-1	True	AATAAA	-16	NA	102671771	102637024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_102637634_102638713_102638835_102639122_102639200_102666076_102666164_102668914_102669005_102671551
transcript_132147.known	chr7	-	348	4	FSM	ENSG00000285437.2	ENST00000621093.4	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	809.478158376672	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	-102572353	False	NA	NA	False	NA	NA	NA	102572521	102567050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102567084_102568009_102568185_102569834_102569925_102572471
transcript_132154.known	chr7	-	348	4	FSM	ENSG00000228049.7	ENST00000333432.8	348	4	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	382.23669223256	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTCCTGAGGCCT	-102670407	False	NA	NA	False	NA	NA	NA	102671601	102666130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102666164_102667089_102667265_102668914_102669005_102671551
transcript_132164.known	chr7	-	4630	3	FSM	ENSG00000285437.2	ENST00000511313.5	4630	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	125.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAGAAAATTAGCTTTA	-102572415	True	NA	NA	False	AATAAA	-34	NA	102572583	102562655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102567084_102569834_102569925_102572471
transcript_132167.known	chr7	-	2096	3	ISM	ENSG00000168255.20	ENST00000489144.5	2553	8	-13	28370	3	-22720	5prime_fragment	FALSE	canonical	3	653	junction_2	691.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAATAAAAAAAAGGTCC	-102572412	True	NA	NA	False	NA	NA	NA	102572580	102566287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_102568185_102569834_102569925_102572471
transcript_132175.nnic	chr7	-	428	3	NIC	ENSG00000228049.7	novel	348	4	NA	NA	-142	85	combination_of_known_splicesites	FALSE	canonical	3	324	junction_1	117.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCTCATAGTT	-102670577	True	NA	NA	False	ATTAAA	-18	NA	102671771	102666045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_102666164_102668914_102669005_102671551
transcript_132176.known	chr7	-	1342	6	FSM	ENSG00000267368.1	ENST00000340457.8	1342	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	154.592884700429	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTGTCCGTGACATCA	NA	False	NA	-1	True	AATAAA	-16	NA	102642791	102637024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102637634_102638713_102638835_102639122_102639200_102640203_102640415_102640611_102640774_102642629
transcript_132177.known	chr7	-	2065	3	FSM	ENSG00000228049.7	ENST00000358438.6	2065	3	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_2	244	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAATAAAAAAAAAGTCC	-102670435	True	NA	NA	False	NA	NA	NA	102671629	102665367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102667265_102668914_102669005_102671551
transcript_132178.known	chr7	-	546	3	FSM	ENSG00000285437.2	ENST00000513438.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	326.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGTCAAGATTAGCT	-102572415	True	NA	NA	False	NA	NA	NA	102572583	102569199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102569544_102569834_102569925_102572471
transcript_132179.known	chr7	-	1336	3	FSM	ENSG00000286830.1	ENST00000664535.1	1336	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCGTTTGGTTTCACCTT	-102748674	True	NA	NA	False	AATAAA	-13	NA	102748695	102699227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102700259_102703314_102703528_102748603
transcript_132186.known	chr7	+	1958	8	FSM	ENSG00000222011.9	ENST00000420217.1	1958	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	3.99489470117416	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGCTACTGATTCTTAAT	102748520	True	NA	14	True	AATAAA	-18	NA	102749009	102809224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_132193.known	chr7	+	1446	7	FSM	ENSG00000222011.9	ENST00000409231.7	1446	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.8192563486863	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCACATGCCTTCTCAT	102748538	True	NA	NA	False	NA	NA	NA	102749027	102808840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102749418_102757853_102757947_102761272_102761412_102772408_102772451_102777252_102777349_102787334_102787470_102808289
transcript_132201.nnic	chr7	+	2047	5	NNC	ENSG00000222011.9	novel	1958	8	NA	NA	-2	6800	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	13.2547161418116	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTTTTTATGGGAAAATA	102748518	True	NA	NA	False	AATAAA	-21	NA	102749007	102764676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_102749418_102751691_102751802_102757853_102757947_102761272_102761412_102763381
transcript_132208.known	chr7	-	2478	19	FSM	ENSG00000161040.17	ENST00000379305.7	2478	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.87988047952096	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTCTGATTCTTATTC	-103074662	False	NA	NA	False	NA	NA	NA	103074833	102813229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_102813532_102822039_102822204_102832839_102832975_102877466_102877594_102878330_102878451_102883304_102883468_102883567_102883686_102884213_102884313_102913085_102913216_102926273_102926375_102931880_102931934_102963532_102963666_102968021_102968118_103025062_103025231_103027448_103027559_103028599_103028749_103029350_103029419_103055643_103055748_103074695
transcript_132209.known	chr7	+	2116	4	FSM	ENSG00000128606.13	ENST00000339431.9	2116	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.49443825784929	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCCTGATACATCCAA	102912930	True	NA	20	True	AATAAA	-32	NA	102912999	102945111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_102913146_102933773_102934686_102939429_102939586_102944209
transcript_13221.known	chr1	+	4493	28	FSM	ENSG00000135829.17	ENST00000367549.4	4493	28	0	0	0	0	multi-exon	TRUE	canonical	3	773	junction_11	101.215832352418	1515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTCCCATAT	182825464	True	NA	7	True	AATAAA	-21	NA	182839346	182887982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_182839457_182842544_182842678_182843293_182843435_182852232_182852345_182853305_182853419_182854029_182854179_182856531_182856579_182858103_182858241_182858550_182858641_182858732_182858895_182859039_182859118_182859992_182860185_182866443_182866586_182866960_182867044_182872336_182872494_182874853_182874955_182876049_182876264_182876446_182876542_182876829_182876904_182878020_182878174_182879249_182879411_182880496_182880609_182881263_182881426_182881519_182881648_182883138_182883369_182883519_182883636_182884612_182884814_182887082
transcript_132211.known	chr7	+	2371	7	FSM	ENSG00000170632.14	ENST00000323716.8	2371	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	176.295916004881	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTACAAGGTTATACATATT	103068507	True	NA	22	True	AATAAA	-15	NA	103075139	103099759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103075412_103075776_103075882_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_132212.known	chr7	+	2524	6	FSM	ENSG00000170632.14	ENST00000441711.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_4	47.9391280688333	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	103074047	True	NA	21	True	AATAAA	-14	NA	103074880	103099758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103092476_103092654_103097276_103097349_103098298
transcript_132213.known	chr7	+	2347	5	FSM	ENSG00000170632.14	ENST00000454559.5	2347	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_3	164.921951237548	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTACAAGGTTATACATAT	103074047	True	NA	21	True	AATAAA	-14	NA	103074880	103099758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103075412_103083681_103083831_103086629_103086765_103097276_103097349_103098298
transcript_132214.known	chr7	+	688	3	FSM	ENSG00000170632.14	ENST00000431642.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	272	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCGTGGTTCTCAGATT	103086626	True	NA	20	True	AGTAAA	-31	NA	103086638	103098683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103086765_103092476_103092654_103098298
transcript_132217.known	chr7	-	1822	5	FSM	ENSG00000161048.12	ENST00000427257.5	1822	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.89711431702997	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTTTTTTCCATTCTT	NA	False	NA	NA	False	NA	NA	NA	103149560	103103086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103103555_103115059_103115175_103119576_103120224_103128482_103128793_103149278
transcript_132218.nic	chr7	-	2086	2	ISM	ENSG00000161048.12	ENST00000427257.5	1822	5	198	23704	-127	-1	5prime_fragment	FALSE	canonical	3	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAATACAAAAAATTA	-103149341	False	NA	NA	False	NA	NA	NA	103149362	103126790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_103128793_103149278
transcript_132224.known	chr7	+	3859	13	FSM	ENSG00000161057.13	ENST00000679205.1	3859	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	270.785123914393	3276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	103344206	False	NA	NA	False	CATAAA	-19	NA	103344265	103370346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103344343_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_132226.known	chr7	+	3988	13	FSM	ENSG00000161057.13	ENST00000679341.1	3988	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	271.322174217704	3262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTTCCCTCCCTCATCC	103344260	False	NA	NA	False	CATAAA	-19	NA	103344319	103370346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103344526_103347523_103347782_103353920_103353959_103354867_103354950_103355693_103355794_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_132238.known	chr7	+	2479	9	FSM	ENSG00000161057.13	ENST00000679250.1	2479	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	321.681495232474	832	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACACATTTAGAACACA	103338982	True	NA	-11	True	ATTAAA	-4	NA	103347635	103369375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103347782_103361956_103362089_103362685_103362759_103363343_103363440_103364142_103364308_103366075_103366164_103367412_103367616_103367712_103367810_103367896
transcript_132241.known	chr7	-	854	8	FSM	ENSG00000105821.15	ENST00000454277.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_7	119.369602666744	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAACAGAATAAGAACATTA	-103337930	True	NA	NA	False	AAAAAG	-7	NA	103344778	103322726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341866_103344558
transcript_132246.known	chr7	+	1509	13	FSM	ENSG00000105819.14	ENST00000453466.1	1509	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	197.799140544139	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAGAGCTAGAGAAAAATA	103289859	True	NA	47	True	ATTAAA	-41	NA	103297456	103312312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299534_103300186_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055_103312132_103312206
transcript_132247.known	chr7	+	1714	12	FSM	ENSG00000105819.14	ENST00000428154.5	1714	12	0	0	0	0	multi-exon	TRUE	canonical	3	651	junction_1	45.7331461978839	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGTTTTGTATTAATGGT	103289837	True	NA	25	True	ATTAAA	-45	NA	103297434	103312415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951_103309096_103310314_103310476_103311642_103311729_103311807_103311897_103312055
transcript_132248.known	chr7	-	2291	17	FSM	ENSG00000105821.15	ENST00000379263.8	2291	17	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_11	41.4366987102013	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGATTAGGAGCATTTTA	-103337919	True	NA	-25	True	TATAAA	-18	NA	103344767	103312288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103312644_103312946_103313102_103315763_103315872_103315987_103316089_103316829_103317015_103319608_103319679_103319755_103319845_103321931_103322082_103322510_103322633_103322702_103322795_103323597_103323664_103324481_103324563_103326542_103326685_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_132249.known	chr7	-	942	8	FSM	ENSG00000105821.15	ENST00000379257.7	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	147.543144848674	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGTATGCAAATCATTAA	-103337950	True	NA	27	True	AAAAAG	-14	NA	103344798	103323597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_103323664_103324481_103324563_103326542_103326685_103327331_103327379_103327655_103327755_103337735_103337812_103341763_103341955_103344558
transcript_132250.known	chr7	+	1161	8	FSM	ENSG00000105819.14	ENST00000498530.5	1161	8	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	37.4966665185054	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGTTTCTTTTTTTCTT	103289858	True	NA	NA	False	TATAAA	-27	NA	103297455	103309259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_103297559_103298567_103298709_103299442_103299530_103300177_103300308_103303841_103304041_103304410_103304491_103307595_103307709_103308951
transcript_132253.known	chr7	-	1924	14	FSM	ENSG00000164815.11	ENST00000297431.9	1924	14	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	18.1567794240403	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGTGTATTTATCTTT	-104205186	True	NA	-1	True	AATAAA	-24	NA	104208013	104126340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104126894_104136780_104136894_104161071_104161183_104165234_104165283_104166771_104166885_104168472_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_132254.known	chr7	-	1409	9	FSM	ENSG00000164815.11	ENST00000447452.6	1409	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_7	13.3878442999611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGAGCAAATATTGAAAAAAA	-104205130	True	NA	NA	False	ATTAAA	-25	NA	104207957	104167993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104168526_104183942_104184034_104184122_104184172_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_132255.known	chr7	-	1214	7	FSM	ENSG00000164815.11	ENST00000485726.1	1214	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	84.1732670679289	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATATATCTGAGGCTGG	-104205182	True	NA	NA	False	NA	NA	NA	104208009	104187542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104187968_104188250_104188382_104195142_104195255_104197724_104197800_104200757_104200959_104204141_104204235_104207832
transcript_132256.known	chr7	-	344	3	FSM	ENSG00000164815.11	ENST00000626700.1	344	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	116.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCATGGATGGTACAAAT	NA	False	NA	NA	False	NA	NA	NA	104208047	104202508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104202545_104204141_104204235_104207832
transcript_132260.nnic	chr7	-	1457	2	NNC	ENSG00000228393.5	novel	1169	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGTGCAATTTTTAAAA	-105011649	True	NA	0	True	AATAAA	-20	NA	105013053	104981742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_104982692_105012545
transcript_132261.nnic	chr7	-	1274	2	FSM	ENSG00000228393.5	ENST00000687790.1	1169	2	-109	4	-109	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCTCAGTGCAATTTTT	-104983978	False	NA	-4	True	AATAAA	-16	NA	104984035	104981746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104982692_104983706
transcript_132262.known	chr7	-	686	2	FSM	ENSG00000228393.5	ENST00000445184.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTTTTTAAAACATGT	-105011620	True	NA	NA	False	NA	NA	NA	105013024	104982098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_104982692_105012931
transcript_132268.known	chr7	+	2523	15	FSM	ENSG00000005483.22	ENST00000476671.5	2523	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	24.022948212414	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTTCAGAATGTCTTTT	105010007	True	NA	NA	False	AATAAA	-16	NA	105014217	105091609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215
transcript_132273.nic	chr7	+	2039	14	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-51	1477	3	0	5prime_fragment	FALSE	canonical	3	22	junction_1	24.3500118464669	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009956	True	NA	-2	True	AAAAAG	-9	NA	105014166	105090132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105014536_105038125_105038200_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_132278.nic	chr7	+	1971	13	NIC	ENSG00000005483.22	novel	1745	14	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_2	15.8499912372917	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009950	True	NA	-2	True	AAAAAG	-9	NA	105014160	105090132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_132286.known	chr7	+	1500	10	FSM	ENSG00000005483.22	ENST00000478990.5	1500	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.4785965459855	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGATATTTCAAAAGA	105009995	True	NA	-2	True	AAAAAG	-9	NA	105014205	105090132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105040838_105041024_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008
transcript_132289.known	chr7	+	1133	7	FSM	ENSG00000005483.22	ENST00000495267.5	1133	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	12.4152683776425	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGGGAGAAAGAACAACAC	105009997	True	NA	NA	False	GATAAA	-14	NA	105014207	105074777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105014536_105040838_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642
transcript_132296.nic	chr7	+	668	3	ISM	ENSG00000005483.22	ENST00000476671.5	2523	15	-51	50546	3	207	5prime_fragment	FALSE	canonical	3	22	junction_1	1.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCTTCTGGAGCTAGAA	105009956	True	NA	NA	False	TTTAAA	-28	NA	105014166	105041063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105014536_105038125_105038200_105040838
transcript_132299.nic	chr7	+	603	2	ISM	ENSG00000005483.22	ENST00000495267.5	1133	7	-47	33711	-3	210	5prime_fragment	FALSE	canonical	3	57	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTCTGGAGCTAGAAAGT	105009950	True	NA	NA	False	TTTAAA	-31	NA	105014160	105041066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105014536_105040838
transcript_13230.known	chr1	+	7929	28	FSM	ENSG00000135862.6	ENST00000258341.5	7929	28	0	0	0	0	multi-exon	TRUE	canonical	3	464	junction_2	77.236529450005	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTGTGGCCTGAGTG	183014843	True	NA	30	True	AATAAA	-24	NA	183023419	183145592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183024135_183103327_183103633_183108275_183108407_183110487_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766_183116904_183117319_183117443_183117533_183117724_183118033_183118147_183121722_183121945_183122062_183122252_183124630_183124877_183125396_183125551_183126119_183126263_183127225_183127405_183128593_183128751_183130343_183130550_183131298_183131379_183132399_183132538_183133405_183133551_183134659_183134810_183135041_183135157_183136385_183136586_183137668_183137828_183140403_183140504_183142533
transcript_132300.known	chr7	+	6714	26	NNC	ENSG00000005483.22	novel	7782	27	NA	NA	0	-277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	25.3732457521697	133	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGATTGTCCTGTACAAC	105009979	True	NA	7	True	AATAAA	-20	NA	105014189	105114084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_105014498_105040874_105041024_105062163_105062279_105063350_105063581_105066726_105066808_105073618_105073678_105074642_105074816_105076042_105076082_105076962_105077194_105077302_105077434_105078845_105078964_105081687_105081798_105090008_105090274_105091215_105091315_105101424_105101590_105101885_105102195_105105438_105105694_105105858_105106004_105106521_105106773_105107165_105107223_105107361_105107926_105108941_105109229_105110279_105110369_105110476_105110603_105110770_105110869_105111824
transcript_132301.known	chr7	+	883	2	FSM	ENSG00000005483.22	ENST00000479838.2	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAGACTTAAGCAATTA	NA	False	NA	15	True	AATAAA	-17	NA	105101470	105102649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105101590_105101885
transcript_132302.nnic	chr7	-	672	2	FSM	ENSG00000239569.4	ENST00000687813.1	652	2	-22	2	-9	0	multi-exon	FALSE	canonical	2	3	junction_1	0	559	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCGATTCCGGCTCTTG	-105014082	False	NA	NA	False	AATAAA	-25	NA	105014108	105013282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105013727_105013880
transcript_132304.known	chr7	-	3679	16	FSM	ENSG00000135250.17	ENST00000393651.8	3679	16	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_14	35.0551311824991	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCCTTGGTCATTGCCC	-105384372	True	NA	-1	True	ATTAAA	-26	NA	105388921	105116373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105118023_105126247_105126341_105126992_105127063_105132790_105132899_105133003_105133105_105142007_105142491_105143083_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_132308.nic	chr7	-	1036	11	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	-11	17003	combination_of_known_junctions	FALSE	canonical	2	9	junction_9	109.583757920597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAAAAAGAAACAGAAGAG	-105384383	True	NA	NA	False	AAAAAG	-7	NA	105388932	105143297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
transcript_13231.known	chr1	+	700	5	FSM	ENSG00000135862.6	ENST00000479499.1	700	5	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_4	38.5324538538619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGCTTTTTGATGGTTGG	183110546	True	NA	NA	False	AATAAA	-15	NA	183110580	183116986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183110655_183114530_183114720_183115519_183115638_183116576_183116676_183116766
transcript_132310.nic	chr7	-	972	10	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-11	26924	-11	17003	5prime_fragment	FALSE	canonical	3	203	junction_8	37.016512831738	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTGAAAAAGAAACAGAAGAG	-105384383	True	NA	NA	False	AAAAAG	-7	NA	105388932	105143297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105143331_105145282_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_132315.nic	chr7	-	939	9	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-11	28909	-11	15018	5prime_fragment	FALSE	canonical	3	203	junction_7	37.8318648760539	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTACTTACGCATATTA	-105384383	True	NA	NA	False	NA	NA	NA	105388932	105145282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105145309_105146492_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_132318.nic	chr7	-	977	9	NIC	ENSG00000135250.17	novel	3679	16	NA	NA	-11	13808	combination_of_known_junctions	FALSE	canonical	2	9	junction_7	121.938252816743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAGCTGAGCCAGCT	-105384383	True	NA	NA	False	NA	NA	NA	105388932	105146492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105268805_105268870_105388647_105388703_105388790
transcript_132319.nic	chr7	-	913	8	ISM	ENSG00000135250.17	ENST00000393651.8	3679	16	-11	30119	-11	13808	5prime_fragment	FALSE	canonical	3	203	junction_6	39.3134966698227	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGAGCTGAGCCAGCT	-105384383	True	NA	NA	False	NA	NA	NA	105388932	105146492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105146659_105160506_105160614_105167376_105167465_105168007_105168096_105169156_105169266_105203627_105203786_105388647_105388703_105388790
transcript_132322.nic	chr7	-	1269	3	ISM	ENSG00000135250.17	ENST00000465112.5	568	6	-34	101806	-11	-101777	5prime_fragment	FALSE	canonical	1	2	junction_1	112	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGGTCTTTTGTATA	-105384383	True	NA	NA	False	AATAAA	-16	NA	105388932	105305499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105306572_105388647_105388703_105388790
transcript_132324.known	chr7	+	319	1	FSM	ENSG00000213361.2	ENST00000393647.2	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTCCCTGCCCTCTC	NA	False	NA	NA	False	AAGAAA	-7	NA	105244651	105244970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105244700_105245000
transcript_132327.known	chr7	-	3480	16	FSM	ENSG00000091127.14	ENST00000356362.6	3480	16	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_15	77.5217818852654	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGCAGATAAGAATCTT	-105515634	True	NA	-11	True	AATAAA	-20	NA	105522258	105456510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_132328.known	chr7	-	3525	16	FSM	ENSG00000091127.14	ENST00000469408.6	3525	16	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_11	32.3639030746018	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAGAATCTTGACCTTGA	-105515647	True	NA	-3	True	AATAAA	-28	NA	105522271	105456502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105457927_105459167_105459260_105462620_105462751_105465312_105465415_105468336_105468464_105470687_105470849_105472131_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_132340.nic	chr7	-	1537	10	ISM	ENSG00000091127.14	ENST00000356362.6	3480	16	6	15530	6	-1755	5prime_fragment	FALSE	canonical	3	111	junction_9	98.6975677336742	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGTTTCAGTATTTT	-105515628	True	NA	0	True	AATAAA	-19	NA	105522252	105472040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508521_105522051
transcript_132341.nic	chr7	-	1581	10	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	-1	15538	-1	-1755	5prime_fragment	FALSE	canonical	3	347	junction_5	34.8906581292379	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGTTTCAGTATTTT	-105515648	True	NA	0	True	AATAAA	-19	NA	105522272	105472040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105472194_105481051_105481178_105482311_105482441_105491539_105491618_105495141_105495254_105502419_105502565_105505954_105506057_105506188_105506274_105508114_105508545_105522051
transcript_132353.nic	chr7	-	834	3	ISM	ENSG00000091127.14	ENST00000469408.6	3525	16	-1	49588	-1	-14505	5prime_fragment	FALSE	canonical	3	359	junction_2	38.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCATTGTGAGTTCTCA	-105515648	True	NA	NA	False	ATTAAA	-16	NA	105522272	105506090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105506274_105508114_105508545_105522051
transcript_132354.nnic	chr7	-	650	3	Antisense	novelGene_ENSG00000223886.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTCTGTTTTATTGTTG	-105532064	True	NA	NA	False	AATAAA	-13	NA	105532093	105530034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_105530458_105531496_105531652_105532021
transcript_132358.known	chr7	+	2627	15	FSM	ENSG00000135249.8	ENST00000497979.5	2627	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	54.1854807723491	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTGAATGCATATTTGTA	105528916	True	NA	14	True	AATAAA	-15	NA	105532211	105567676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105532358_105532823_105532870_105536564_105536613_105542491_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_132359.known	chr7	+	2860	15	FSM	ENSG00000135249.8	ENST00000257700.7	2860	15	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_5	26.3009466734254	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAATGCATATTTGTAA	105528905	True	NA	15	True	AATAAA	-16	NA	105532200	105567677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_105532358_105532823_105532870_105536564_105536750_105542407_105542650_105546909_105547084_105547183_105547334_105548553_105548711_105550054_105550166_105550260_105550487_105551569_105551708_105555027_105555228_105563732_105563948_105565276_105565458_105565529_105565649_105567118
transcript_132369.nnic	chr7	-	893	5	NNC	ENSG00000185055.11	novel	737	5	NA	NA	79	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	14.0712472794703	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	NA	False	NA	-15	True	AATAAA	-1	NA	105581611	105565123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_105565448_105567428_105567491_105569202_105569291_105569406_105569572_105581357
transcript_13237.known	chr1	+	855	3	FSM	ENSG00000286966.1	ENST00000665299.1	855	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	183613536	183619335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_183613790_183616000_183616199_183618931
transcript_132370.known	chr7	-	737	5	FSM	ENSG00000185055.11	ENST00000480514.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	6.53834841531101	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCTGTATTTATATTTT	-105581204	True	NA	-15	True	AATAAA	-1	NA	105581493	105565123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105565448_105567466_105567491_105569202_105569291_105569406_105569572_105581357
transcript_132371.known	chr7	-	799	5	FSM	ENSG00000185055.11	ENST00000485614.5	799	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.7797338380595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGTTTTTAAATCA	-105581207	True	NA	NA	False	AAAACA	-33	NA	105581496	105565232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105565616_105567466_105567491_105569202_105569291_105569406_105569572_105581357
transcript_132372.known	chr7	-	841	5	FSM	ENSG00000185055.11	ENST00000490493.1	841	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.1383571472171	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGGGAAATGAGATCTCC	-105600840	True	NA	NA	False	AATACA	-31	NA	105600875	105567101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105567491_105569202_105569291_105569406_105569572_105591304_105591392_105600763
transcript_132376.known	chr7	-	1550	4	FSM	ENSG00000185055.11	ENST00000486180.5	1550	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	2.82842712474619	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGTCAAATGTTTAAGG	-105581197	True	NA	NA	False	NA	NA	NA	105581486	105566322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105567491_105569202_105569291_105569406_105569572_105581357
transcript_132387.nic	chr7	-	2667	4	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38657	0	-15095	0	3prime_fragment	FALSE	canonical	3	88	junction_1	34.1792659696229	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTTGATCTGATCTGTT	NA	False	NA	-3	True	ATTAAA	-16	NA	105639361	105613473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105614817_105620199_105620322_105624074_105624268_105638352
transcript_132389.nnic	chr7	-	813	4	NNC	ENSG00000146776.15	novel	410	3	NA	NA	-942	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	29.9369708257569	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGCCGTATGTAACT	NA	False	NA	-1	True	AATAAA	-21	NA	105877541	105875090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_105875235_105875811_105875881_105876377_105876586_105877149
transcript_132391.nic	chr7	-	1429	3	ISM	ENSG00000146776.15	ENST00000474433.5	2732	9	38657	6621	-15095	138	internal_fragment	FALSE	canonical	3	120	junction_1	25.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTCTGAAGTCAGGATGC	NA	False	NA	NA	False	AATAAA	-31	NA	105639361	105620094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_105620322_105624074_105624268_105638352
transcript_132394.known	chr7	-	1115	3	FSM	ENSG00000146776.15	ENST00000478915.1	1115	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGATAGCTGGAGCGTG	-105875592	True	NA	NA	False	NA	NA	NA	105876477	105760553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105761464_105788603_105788709_105876377
transcript_132397.known	chr7	-	1470	4	FSM	ENSG00000146776.15	ENST00000318724.8	1470	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	18.3726850393609	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTTTCCTCATATATAA	-105875697	True	NA	NA	False	AATAAA	-18	NA	105876582	105760372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105761464_105788603_105788709_105875811_105875881_105876377
transcript_132398.known	chr7	-	410	3	FSM	ENSG00000146776.15	ENST00000464874.1	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	28	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCTGCCGTATGTAACT	-105875689	True	NA	-1	True	AATAAA	-21	NA	105876574	105875090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_105875235_105875811_105875881_105876377
transcript_13240.known	chr1	-	7266	4	FSM	ENSG00000162704.16	ENST00000359856.11	7266	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	376.263501049759	1264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGAGTTTATTAATC	-183630965	True	NA	NA	False	AATAAA	-20	NA	183635783	183620845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_183627595_183630460_183630638_183633081_183633155_183635516
transcript_132412.nic	chr7	+	1303	2	ISM	ENSG00000128536.16	ENST00000470188.5	2199	15	-9	120592	-6	1275	5prime_fragment	FALSE	canonical	3	60	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGTTGTTTTAACTCC	105875327	True	NA	NA	False	AATAAA	-17	NA	105876811	105911873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_105877258_105911016
transcript_132414.known	chr7	-	1193	6	FSM	ENSG00000008282.9	ENST00000470347.1	1193	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	247.073268485281	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAGAAAAACCTTTATTT	-106105080	True	NA	NA	False	AAAACA	-22	NA	106112221	106091456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106091940_106092563_106092670_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_132419.known	chr7	-	835	6	FSM	ENSG00000008282.9	ENST00000634737.1	835	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	262.065945899119	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTAAGATGTAAATGTATT	-106112129	False	NA	45	True	CATAAA	-20	NA	106112142	106091639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106091940_106092948_106093138_106096292_106096303_106097689_106097898_106099157_106099283_106112139
transcript_132422.known	chr7	-	2130	5	FSM	ENSG00000008282.9	ENST00000455385.7	2130	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_2	22.4763764873255	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	-106105171	True	NA	NA	False	AATAAA	-15	NA	106112312	106090504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139
transcript_132427.known	chr7	-	2127	6	FSM	ENSG00000008282.9	ENST00000011473.6	2127	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	210.661434534183	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCACTGATTGTTAATA	NA	False	NA	NA	False	AATAAA	-15	NA	106112576	106090504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106091940_106092948_106093138_106097689_106097898_106099157_106099283_106112139_106112212_106112478
transcript_132428.known	chr7	-	2265	11	FSM	ENSG00000105835.13	ENST00000681936.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	203.016255506794	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGAATGTCTAGGCACT	-106284507	False	5000	NA	False	ATTAAA	-16	NA	106284544	106250430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272656_106274945_106275050_106277022_106277180_106284347
transcript_132429.known	chr7	-	2598	11	FSM	ENSG00000105835.13	ENST00000681878.1	2598	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	169.118567874731	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCATTTATTAATTTTAAA	-106284934	False	NA	-17	True	ATTAAA	-22	NA	106284971	106250038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106251194_106253016_106253152_106254363_106254505_106261587_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275041_106277022_106277180_106284827
transcript_132434.known	chr7	-	1495	8	FSM	ENSG00000105835.13	ENST00000354289.9	1495	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_3	44.3911188028802	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTGTTTATGTTGGTA	-106285155	False	NA	NA	False	TATAAA	-17	NA	106285192	106261489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_106261708_106263391_106263618_106268463_106268601_106269153_106269313_106272529_106272659_106274945_106275050_106277022_106277180_106284827
transcript_132436.known	chr7	+	847	1	FSM	ENSG00000273320.1	ENST00000609281.1	847	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGAAGTCAGTATATA	106285457	False	NA	NA	False	AATAAA	-21	NA	106285479	106286326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_106285500_106286300
transcript_132437.known	chr7	+	3689	11	FSM	ENSG00000005249.13	ENST00000265717.5	3689	11	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_5	21.679714020254	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGGATGTCATTATTTA	107041536	True	NA	11	True	ATTAAA	-16	NA	107044704	107161811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107045215_107070280_107070317_107121951_107122005_107128211_107128296_107140846_107140954_107146307_107146462_107150921_107151024_107153176_107153252_107156983_107157050_107157185_107157325_107159448
transcript_132439.known	chr7	-	4658	22	FSM	ENSG00000164597.15	ENST00000297135.9	4658	22	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_15	17.3386961876471	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACATAGTAATCCTATATAT	-107561521	True	NA	-20	True	AATAAA	-30	NA	107563920	107201371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107203631_107210525_107210606_107211098_107211226_107230614_107230692_107236449_107236688_107248395_107248500_107256731_107256795_107258272_107258384_107281299_107281400_107283570_107283733_107298141_107298347_107324439_107324522_107362032_107362111_107362307_107362421_107372594_107372761_107412501_107412633_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_13244.known	chr1	-	2455	3	FSM	ENSG00000162704.16	ENST00000462965.1	2455	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	25	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTCTCTGACTTTAACA	-183630011	False	NA	-23	True	AATAAA	-21	NA	183633958	183626193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_183627595_183630460_183630638_183633081
transcript_132445.nnic	chr7	-	1219	7	NNC	ENSG00000164597.15	novel	576	6	NA	NA	10	67774	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	61.374985856527	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGTGAAATCCTTGCCT	-107564135	False	NA	NA	False	AATAAA	-28	NA	107564251	107459462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_107459789_107527236_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_132446.known	chr7	-	576	6	FSM	ENSG00000164597.15	ENST00000605888.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_2	12.9553077925613	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTTTTTTTTT	-107561535	True	NA	NA	False	AATGAA	-5	NA	107563934	107527236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107527358_107548110_107548181_107548277_107548333_107554284_107554343_107557975_107558116_107563802
transcript_13245.nnic	chr1	+	1121	3	NNC	ENSG00000143344.16	novel	5100	19	NA	NA	-38	-206288	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAAATGAACTTGAAGGCA	NA	False	NA	NA	False	NA	NA	NA	183636046	183722243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_183636502_183697402_183697513_183721687
transcript_132454.known	chr7	+	2704	11	FSM	ENSG00000105856.14	ENST00000468410.5	2704	11	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	32.9842386603056	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTGCTTATCTCTG	107165508	True	NA	14	True	AATAAA	-6	NA	107168960	107202508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_132455.known	chr7	+	2834	11	FSM	ENSG00000105856.14	ENST00000222574.9	2834	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	48.7677147301368	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGACGTCTACTGATTG	107165550	True	NA	28	True	AATAAA	-20	NA	107169002	107202522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107169186_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159_107200302_107201413
transcript_132458.nic	chr7	+	1622	10	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	17	2177	-12	0	5prime_fragment	FALSE	canonical	3	80	junction_1	34.3223643031482	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	107165525	True	NA	8	True	AATAAA	-16	NA	107168977	107200331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833_107196152_107200159
transcript_132461.nic	chr7	+	1497	9	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	17	6310	-12	225	5prime_fragment	FALSE	canonical	3	80	junction_1	36.3814427284021	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGGTTCATGGTAACTGGA	107165525	True	NA	NA	False	AATAAA	-16	NA	107168977	107196198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_132462.nic	chr7	+	2421	9	ISM	ENSG00000105856.14	ENST00000468410.5	2704	11	17	5386	-12	0	5prime_fragment	FALSE	canonical	3	80	junction_1	36.3814427284021	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTGCCTGTACCCTTA	107165525	True	NA	8	True	AATAAA	-22	NA	107168977	107197122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_107169028_107179878_107180063_107182372_107182602_107185800_107185943_107186360_107186473_107186568_107186682_107189291_107189449_107190172_107190318_107195833
transcript_132468.known	chr7	+	476	2	FSM	ENSG00000105856.14	ENST00000607681.1	476	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTTATCCGTGCAGG	107195837	False	NA	8	True	AATAAA	-16	NA	107195847	107200331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107196152_107200159
transcript_13247.known	chr1	+	1632	6	FSM	ENSG00000198860.14	ENST00000462677.3	1632	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	200.741226458344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCGTGGCTTTGTTCCAG	184048531	True	NA	NA	False	CATAAA	-6	NA	184051755	184073846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184070615_184070733_184072156_184072299_184072826
transcript_132472.nic	chr7	+	2032	8	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-6	-103	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	21.826776291182	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTTTGTTTTGCCAA	107562687	True	NA	10	True	AATAAA	-17	NA	107563951	107578420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_132479.known	chr7	+	1676	8	FSM	ENSG00000105865.11	ENST00000443233.5	1676	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.2176910345043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGATGGGTAGAGTGGGA	107562723	True	NA	NA	False	NA	NA	NA	107563987	107577850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564248_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573884_107575187_107575311_107576365_107576593_107577312
transcript_132484.nic	chr7	+	2100	7	NIC	ENSG00000105865.11	novel	2266	8	NA	NA	-13	-103	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	20.9920619917784	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTATTTTGTTTTGCCAA	107562680	True	NA	10	True	AATAAA	-17	NA	107563944	107578420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_107564210_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_132498.known	chr7	+	942	7	FSM	ENSG00000075790.12	ENST00000465919.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	63.5437294747134	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATATGGTGGCTGTTTAC	107577114	True	NA	-36	True	AATATA	-41	NA	107580245	107618615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107580302_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_1325.known	chr1	-	524	5	FSM	ENSG00000116251.11	ENST00000471204.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3253.49284423679	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGGAAGACGAGGATTAA	-6209193	False	NA	NA	False	NA	NA	NA	6209244	6186691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6208680_6208740_6209134
transcript_13250.known	chr1	+	1834	5	FSM	ENSG00000198860.14	ENST00000533373.6	1834	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	168.674798058275	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048474	True	NA	17	True	AATAAA	-19	NA	184051698	184074212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072195_184072826
transcript_132519.known	chr7	+	2266	8	FSM	ENSG00000105865.11	ENST00000265720.8	2266	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	14.549002350256	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTGCCATCTTTT	107562706	True	NA	113	True	AATGAA	-16	NA	107563970	107578523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564210_107564587_107564677_107567049_107567187_107571144_107571267_107573703_107573822_107575187_107575311_107576365_107576593_107577312
transcript_13252.known	chr1	+	1907	5	FSM	ENSG00000198860.14	ENST00000645668.2	1907	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_4	111.777401562212	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048505	True	NA	17	True	AATAAA	-19	NA	184051729	184074212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072156_184072299_184072826
transcript_132520.known	chr7	+	1375	7	FSM	ENSG00000105865.11	ENST00000431839.5	1375	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	28.9865869364129	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAATACTAAGAAATTATG	107562715	True	NA	NA	False	AATAAA	-2	NA	107563979	107577909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107564060_107564587_107564677_107567049_107567187_107571144_107571267_107575187_107575311_107576365_107576593_107577312
transcript_132521.known	chr7	+	2911	8	FSM	ENSG00000075790.12	ENST00000005259.9	2911	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	20.3098448029119	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTTGCATATTAAATT	107577114	True	NA	11	True	AATAAA	-20	NA	107580245	107620478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107618327
transcript_132522.known	chr7	+	1157	9	FSM	ENSG00000075790.12	ENST00000445771.6	1157	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	73.1247863244741	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTCCAAAATTAGAAGTT	107577133	True	NA	13	True	AATAAA	-23	NA	107580264	107618664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107580302_107580758_107580865_107583881_107583983_107593954_107594106_107595866_107596003_107600396_107600506_107613331_107613433_107613653_107613733_107618327
transcript_132523.known	chr7	+	573	7	FSM	ENSG00000105879.12	ENST00000432748.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	142.809896949289	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTCTCTCTTCATGTGT	107740663	True	NA	NA	False	NA	NA	NA	107744141	107758180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744177_107748879_107749048_107752544_107752618_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_132528.known	chr7	+	3987	6	FSM	ENSG00000105879.12	ENST00000440859.8	3987	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	59.76286472384	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCCTAGATGAATTTTT	107740663	True	NA	NA	False	AATAAA	-19	NA	107744141	107761667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744177_107748879_107749048_107753410_107753512_107753894_107753979_107755417_107755492_107758142
transcript_132533.known	chr7	+	587	4	FSM	ENSG00000105879.12	ENST00000493361.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	123.134073269749	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAAATTAGAATAATTTC	107740666	True	NA	NA	False	AATAAA	-2	NA	107744144	107754183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107744177_107748879_107749048_107753413_107753512_107753894
transcript_132534.known	chr7	-	553	2	FSM	ENSG00000241764.5	ENST00000609979.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAGAAAGGAGCACAATTA	-107743930	True	NA	NA	False	NA	NA	NA	107744050	107742968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107743932
transcript_132535.known	chr7	-	651	2	FSM	ENSG00000241764.5	ENST00000440971.2	651	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAGCACAATTAATGGAAA	-107744565	True	NA	NA	False	AATAGA	-2	NA	107744581	107742961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107744372
transcript_132536.known	chr7	-	772	2	FSM	ENSG00000241764.5	ENST00000663315.2	776	2	1	3	1	2	multi-exon	FALSE	canonical	2	4	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATCTTTGTAGTTGTACGG	-107743590	False	120	55	True	AATAAA	-20	NA	107743606	107742753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107743404_107743484
transcript_132540.known	chr7	-	5650	34	FSM	ENSG00000091136.15	ENST00000222399.11	5650	34	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_33	58.4519769453132	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-107997843	True	NA	-1	True	AATAAA	-21	NA	108003161	107923798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975233_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_132543.known	chr7	+	3537	14	FSM	ENSG00000091140.15	ENST00000205402.10	3537	14	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_10	106.790343733846	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACTGTTATCTACTAAGC	107877031	True	NA	23	True	AATAAA	-33	NA	107891182	107921198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107902324_107902394_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_132548.known	chr7	+	1993	13	FSM	ENSG00000091140.15	ENST00000440410.5	1993	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	358.453652280645	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTCTATAAACCGAACT	107877021	True	NA	-19	True	NA	NA	NA	107891172	107919713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_107891290_107893199_107893279_107901737_107901818_107903477_107903548_107904957_107905059_107905360_107905505_107906266_107906369_107915505_107915697_107916793_107916965_107917272_107917463_107917923_107918062_107919009_107919100_107919193
transcript_13255.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000645963.2	609	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	222.248734529581	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	184048531	True	NA	8	True	AATAAA	-18	NA	184051755	184095845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184093624_184093725_184095689
transcript_132555.known	chr7	-	5706	34	FSM	ENSG00000091136.15	ENST00000678704.1	5706	34	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_23	71.2221269566399	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGTGTACTTGTTACTT	-108003196	False	NA	-1	True	AATAAA	-21	NA	108003213	107923798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_107924088_107924229_107924390_107926182_107926360_107929063_107929206_107929411_107929620_107931355_107931501_107932173_107932378_107935414_107935657_107937092_107937278_107939988_107940359_107951225_107951323_107952008_107952224_107953529_107953755_107955466_107955631_107959248_107959481_107959690_107959835_107960444_107960650_107961205_107961330_107961548_107961677_107962904_107963064_107964551_107964688_107972991_107973072_107974985_107975099_107975229_107975414_107975688_107975878_107978046_107978168_107980608_107980812_107986021_107986086_107986174_107986364_107994886_107994961_107998356_107998493_108001557_108001734_108002848_108002972_108003110
transcript_132558.known	chr7	-	4569	11	FSM	ENSG00000135241.17	ENST00000257694.13	4569	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	34.0052937055394	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGCTTCTTTCTTTCT	-108524426	True	NA	NA	False	AATACA	-19	NA	108526135	108470416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108521475_108521522_108526028
transcript_13256.known	chr1	+	609	5	FSM	ENSG00000198860.14	ENST00000647465.1	609	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	224.223103180738	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGTCTGTGGTATTTTG	184048493	True	NA	8	True	AATAAA	-18	NA	184051717	184095845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095030_184095093_184095689
transcript_132564.known	chr7	-	3366	10	FSM	ENSG00000135241.17	ENST00000453144.5	3366	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	41.7239606088503	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTGTTAAAAGGCTAAT	-108526283	True	NA	-17	True	AATAAA	-13	NA	108526315	108471626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515448_108526028
transcript_132565.known	chr7	-	3462	10	FSM	ENSG00000135241.17	ENST00000436062.5	3462	10	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	19.9654021735255	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTATCATTAACAAAAATA	-108526286	True	NA	-51	True	TATAAA	-27	NA	108526318	108471660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487758_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_132569.known	chr7	-	4268	10	FSM	ENSG00000135241.17	ENST00000426128.6	4268	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.634890269141	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCATGGCTTCTTTC	-108524362	True	NA	NA	False	AATACA	-14	NA	108526071	108470421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108472676_108479183_108479380_108487944_108487954_108491409_108491468_108496583_108496756_108497482_108497578_108502490_108502643_108514143_108514294_108514435_108515575_108526028
transcript_132574.nnic	chr7	-	790	3	NIC	ENSG00000177683.14	novel	425	2	NA	NA	-21	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	33.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTGACAGTATTTTTA	NA	False	NA	NA	False	ATTAAA	-20	NA	108569771	108554544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_108554860_108565829_108566023_108569489
transcript_132575.known	chr7	-	3384	3	FSM	ENSG00000177683.14	ENST00000415914.4	3384	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	9.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATCTGAAAATCCAAAATG	-108566895	True	NA	95	True	AATAAA	-18	NA	108569706	108562131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108565106_108565829_108566023_108569489
transcript_132576.known	chr7	-	868	3	FSM	ENSG00000177683.14	ENST00000438865.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	30.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGCCATTTTTGTAC	-108566939	True	NA	NA	False	AATAAA	-6	NA	108569750	108564569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108565106_108565951_108566023_108569489
transcript_132579.known	chr7	-	425	2	FSM	ENSG00000177683.14	ENST00000468884.1	425	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGACAGTATTTTTAAT	-108566786	True	NA	NA	False	ATTAAA	-22	NA	108569597	108554542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108554860_108569489
transcript_13258.known	chr1	+	1844	4	FSM	ENSG00000198860.14	ENST00000423085.7	1844	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	191.731293452292	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTTGAAATCTGTATT	184048426	True	NA	17	True	AATAAA	-19	NA	184051650	184074212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184072826
transcript_132580.known	chr7	-	880	2	FSM	ENSG00000177683.14	ENST00000493722.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTTGGCAGAAAGTCTCT	-108566834	True	NA	NA	False	TATAAA	-9	NA	108569645	108564381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108565106_108569489
transcript_132581.known	chr7	-	1051	2	FSM	ENSG00000177683.14	ENST00000484452.1	1051	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAGCACTAGCATAATAAGC	-108566877	True	NA	NA	False	AATAAA	-38	NA	108569688	108565170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_108566023_108569489
transcript_132583.known	chr7	+	744	1	FSM	ENSG00000231006.1	ENST00000457119.1	744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	111	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGACTATTT	NA	False	NA	NA	False	AATGAA	-5	NA	108510232	108510976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_108510200_108511000
transcript_132584.known	chr7	+	2409	3	FSM	ENSG00000128590.5	ENST00000249356.4	2409	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	11	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGCTGAGGATTATCT	108567308	True	NA	4	True	AATAAA	-18	NA	108569873	108574850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_108570104_108571716_108571944_108572898
transcript_132589.known	chr7	+	584	2	FSM	ENSG00000128590.5	ENST00000491582.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGGGTGATTCTCTGA	108567301	True	NA	NA	False	NA	NA	NA	108569866	108572063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_108570104_108571716
transcript_132596.nnic	chr7	-	748	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-128	-11821	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6.36396103067893	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	-109596537	False	NA	-3	True	AATAAA	-17	NA	109597294	109533801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109559035_109559130_109562744_109562836_109565250_109565333_109597040
transcript_132598.nnic	chr7	-	1129	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-127	-11821	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	7.15454401062709	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	-109596536	True	NA	-3	True	AATAAA	-17	NA	109597293	109533801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109595209_109595686_109597040
transcript_132600.nnic	chr7	-	769	5	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-128	-27835	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8.07774721070176	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGCATAAAAAACAGTGC	-109596537	False	NA	NA	False	AATAAA	-20	NA	109597294	109549815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109550064_109559035_109559130_109562744_109562836_109565250_109565333_109597040
transcript_132607.nnic	chr7	-	654	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-128	-11821	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_3	3.74165738677394	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATTTTGTTGTTGTTGT	-109596537	False	NA	-3	True	AATAAA	-17	NA	109597294	109533801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109534029_109562744_109562836_109565250_109565333_109597040
transcript_13261.known	chr1	+	2219	4	FSM	ENSG00000198860.14	ENST00000643231.1	2219	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	155.982905046248	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATTAAACCGACTTCTTT	184048461	True	NA	NA	False	NA	NA	NA	184051685	184097485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184051891_184054353_184054436_184054727_184054864_184095689
transcript_132610.nnic	chr7	-	670	4	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-128	-14916	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.60232526704263	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTAGGAGTTTGTTAT	-109596537	False	NA	NA	False	AATAAA	-24	NA	109597294	109536896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109537140_109562744_109562836_109565250_109565333_109597040
transcript_132615.nnic	chr7	-	1864	3	NNC	ENSG00000234273.1	novel	388	4	NA	NA	-127	-42217	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	8.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTTTATTTCAGT	-109596536	True	NA	NA	False	ATTAAA	-14	NA	109597293	109564197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_109565333_109595209_109595686_109597040
transcript_132625.nnic	chr7	-	427	3	NNC	ENSG00000184903.10	novel	2130	6	NA	NA	-30	-72084	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	42.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAAACTGTCATGATTT	-111560587	True	NA	NA	False	AATAAA	-16	NA	111562547	111559323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_111559594_111561850_111561924_111562463
transcript_132626.known	chr7	-	1205	7	FSM	ENSG00000184903.10	ENST00000331762.7	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	12.2667119564381	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGTCCTGTTTTGAGTA	-111560557	True	NA	-8	True	AATAAA	-12	NA	111562517	110663053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_110663722_110886592_110886696_110963499_110963566_111487237_111487342_111521312_111521450_111561850_111561924_111562463
transcript_132627.known	chr7	-	421	5	FSM	ENSG00000184903.10	ENST00000452753.1	421	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	50.3556104123463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAGTAACTCAGAAGCA	-111560544	True	NA	NA	False	NA	NA	NA	111562504	111487239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_111487342_111521312_111521450_111532517_111532586_111561850_111561924_111562463
transcript_132629.known	chr7	+	1736	12	FSM	ENSG00000198839.10	ENST00000361946.8	1736	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	39.481557573502	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTCAGTCTCCTCCCCA	112204223	True	NA	76	True	TATAAA	-18	NA	112206694	112343094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112206808_112286876_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083_112330217_112336103_112336172_112337729_112337827_112339842_112339886_112340871_112341047_112342560
transcript_132630.known	chr7	+	1075	7	FSM	ENSG00000198839.10	ENST00000450657.1	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	12.8797860575744	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATTTGGATATCCAC	112204229	True	NA	NA	False	NA	NA	NA	112206700	112330474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112206808_112286872_112287075_112295868_112295958_112296228_112296312_112318181_112318274_112327716_112327828_112330083
transcript_132632.known	chr7	+	2415	13	FSM	ENSG00000006652.15	ENST00000674887.1	2415	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	83.370158530096	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATTTTACTTTGAAAT	112445755	True	NA	-30	True	NA	NA	NA	112450459	112476149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112465638_112465839_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_132636.known	chr7	+	2364	13	FSM	ENSG00000006652.15	ENST00000674915.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	79.8924624451866	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATAAAGATTTTTTTCC	112445755	True	NA	-16	True	NA	NA	NA	112450459	112476163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112470898_112471034_112472218_112472348_112472765_112472862_112475429
transcript_132637.known	chr7	+	3232	12	FSM	ENSG00000006652.15	ENST00000621379.4	3232	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	68.8725016795768	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	112422909	True	NA	20	True	AATAAA	-32	NA	112423143	112477200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112423433_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_132638.known	chr7	+	3269	12	FSM	ENSG00000006652.15	ENST00000403825.8	3269	12	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	36.2712462673276	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTTTGTTTTTGAG	112445755	True	NA	23	True	AATAAA	-35	NA	112450459	112477203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_132641.known	chr7	+	3397	12	FSM	ENSG00000006652.15	ENST00000535603.5	3397	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	67.4068687183526	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGGTTTTTGTTTGTTTTT	112452042	False	NA	20	True	AATAAA	-32	NA	112452057	112477200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112452512_112455762_112455868_112456001_112456087_112456913_112457039_112458860_112459019_112461865_112461917_112462000_112462180_112462269_112462379_112467980_112468116_112472218_112472348_112472765_112472862_112475429
transcript_132646.known	chr7	+	1938	4	FSM	ENSG00000006652.15	ENST00000429071.5	1938	4	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	8.83176086632785	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGTTAATAAATGTATT	112445753	True	NA	NA	False	NA	NA	NA	112450457	112458336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_112450783_112455762_112455868_112456001_112456087_112456913
transcript_132651.known	chr7	-	2659	6	FSM	ENSG00000146802.13	ENST00000454074.5	2659	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	57.6589975632598	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTCACTTTGTCTTT	-112788937	True	NA	NA	False	NA	NA	NA	112790393	112767084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112788453_112788545_112790159
transcript_132652.known	chr7	-	7276	5	FSM	ENSG00000146802.13	ENST00000312814.11	7276	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	14.3003496460751	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGCATTAATTTTTAATAT	-112788937	True	NA	NA	False	ATTAAA	-29	NA	112790393	112762376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112783697_112784954_112790159
transcript_132654.known	chr7	-	1291	4	FSM	ENSG00000146802.13	ENST00000447395.5	1291	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	61.4401244211703	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTATGCTGTATTTT	-112788967	True	NA	NA	False	NA	NA	NA	112790423	112767135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112767745_112772780_112773056_112775175_112775319_112790159
transcript_132655.known	chr7	-	3940	5	FSM	ENSG00000164603.12	ENST00000297145.9	3940	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.40254569624358	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTCTGTTACTTGTA	-112938690	True	NA	-1	True	ATTAAA	-20	NA	112939875	112819146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_112822374_112832560_112832676_112895568_112895740_112915305_112915448_112939590
transcript_132656.nnic	chr7	-	1559	5	NNC	ENSG00000164603.12	novel	3940	5	NA	NA	0	-8528	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	20.0810856280232	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATTTAAAGCATCAAGCAT	-112938690	True	NA	NA	False	NA	NA	NA	112939875	112830880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_112831439_112832272_112832676_112895568_112895740_112915305_112915448_112939590
transcript_132659.known	chr7	-	962	3	FSM	ENSG00000214194.9	ENST00000441359.1	962	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	170.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATTTAATGTTAAAAAAA	-113116065	True	NA	NA	False	AAAACA	-45	NA	113118560	113116860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_113117608_113118067_113118162_113118439
transcript_132660.known	chr7	-	1011	3	FSM	ENSG00000214194.9	ENST00000397764.8	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_2	37	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCGTGTCCATTTCTTA	-113116059	True	NA	0	True	ATTAAA	-27	NA	113118554	113116717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_113117608_113118067_113118162_113118527
transcript_132661.known	chr7	+	240	3	NNC	ENSG00000128573.27	novel	309	3	NA	NA	5	42	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	3	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTCAGCCTTCAGCGTCA	NA	False	NA	NA	False	NA	NA	NA	114629858	114631626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_114629989_114631035_114631044_114631524
transcript_132662.known	chr7	+	474	2	FSM	ENSG00000135272.13	ENST00000423503.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCAAGAATGAATTAGC	114922840	False	NA	NA	False	AATAAA	-23	NA	114922853	114923658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_114923128_114923458
transcript_132664.nic	chr7	+	1010	6	NIC	ENSG00000225535.7	novel	952	5	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	1.01980390271856	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	115030528	True	NA	NA	False	AATAAA	-16	NA	115030575	115125935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_115030769_115031786_115031826_115118732_115118826_115118934_115119057_115122177_115122248_115125442
transcript_132665.known	chr7	+	952	5	FSM	ENSG00000225535.7	ENST00000660905.1	952	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.11803398874989	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	115030563	115125935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_115030769_115031786_115031826_115118732_115118826_115118934_115119057_115125442
transcript_132666.known	chr7	+	816	5	FSM	ENSG00000225535.7	ENST00000669990.1	816	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.707106781186548	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	115030600	True	NA	NA	False	AATAAA	-16	NA	115030647	115125935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_115030769_115031786_115031826_115118732_115118826_115122177_115122248_115125442
transcript_132669.nic	chr7	+	764	4	NIC	ENSG00000225535.7	novel	952	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGACTCTGCTTGTTT	115030582	True	NA	NA	False	AATAAA	-16	NA	115030629	115125935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_115030769_115031786_115031826_115118732_115118826_115125442
transcript_132670.known	chr7	+	2953	3	FSM	ENSG00000105971.15	ENST00000222693.5	2953	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	3	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTGTGTATTGCTTTT	116499397	True	NA	8	True	AATAAA	-16	NA	116499737	116508541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116499932_116500259_116500448_116505970
transcript_132673.known	chr7	+	1179	2	FSM	ENSG00000105971.15	ENST00000393480.3	1179	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCACTTTAATCTGAGAG	116499439	False	NA	NA	False	AATAAA	-19	NA	116499779	116501286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116499932_116500259
transcript_132674.known	chr7	+	2736	7	FSM	ENSG00000135269.18	ENST00000358204.9	2736	7	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	19.9888858007533	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205315	True	NA	NA	False	AATAAA	-17	NA	116210538	116258783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_132677.nic	chr7	+	1537	6	ISM	ENSG00000135269.18	ENST00000358204.9	2736	7	-29	6045	4	0	5prime_fragment	FALSE	canonical	3	379	junction_2	21.8961183774659	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGGGAATGAGATT	116205286	True	NA	5	True	AATAAA	-18	NA	116210509	116252738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_116210735_116234533_116234620_116249019_116249273_116250160_116250497_116251759_116251976_116252317
transcript_132681.nic	chr7	+	2675	6	NIC	ENSG00000135269.18	novel	2736	7	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	152.950187969809	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCATTGTATCTTTTTAT	116205290	True	NA	NA	False	AATAAA	-17	NA	116210513	116258783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_116210735_116249019_116249273_116250160_116250497_116251759_116251976_116252317_116252477_116257293
transcript_132688.known	chr7	+	873	3	FSM	ENSG00000135269.18	ENST00000461440.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_2	2.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATCTTAAGATGGTAAAG	116205282	True	NA	NA	False	NA	NA	NA	116210505	116249577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116210735_116234533_116234620_116249019
transcript_13269.nnic	chr1	+	726	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-153	-182	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	94.2452120799778	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCGAACTTTCTTTG	184386864	False	NA	1	True	AATGAA	-38	NA	184386875	184619754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_132691.known	chr7	+	699	3	FSM	ENSG00000135269.18	ENST00000393484.2	699	3	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_2	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAATGGGAATGAGATT	NA	False	NA	5	True	AATAAA	-18	NA	116250434	116252738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116250497_116251759_116251976_116252317
transcript_132693.known	chr7	+	2456	3	FSM	ENSG00000105974.13	ENST00000341049.7	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	68.5	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	116524642	True	NA	16	True	AATAAA	-18	NA	116525035	116561179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116525093_116526524_116526690_116558945
transcript_132696.known	chr7	+	1653	3	FSM	ENSG00000105974.13	ENST00000451122.5	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	76.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAACCTCAACTGCCTA	116524615	True	NA	NA	False	AAAAAG	-8	NA	116525008	116559636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116525806_116526524_116526690_116558945
transcript_13270.nnic	chr1	+	1298	6	NNC	ENSG00000116667.15	novel	2607	6	NA	NA	-153	390	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	94.2452120799778	272	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTCTTCTCCCATTCA	184386864	False	NA	10	True	AATAAA	-21	NA	184386875	184620326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_184386993_184477464_184477604_184507587_184507683_184590738_184590816_184598400_184598462_184619517
transcript_132703.known	chr7	+	845	3	FSM	ENSG00000105974.13	ENST00000393468.1	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	75.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTTTATTTGCATGT	116526070	False	NA	87	True	TTTAAA	-21	NA	116526276	116559513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116526389_116526524_116526690_116558945
transcript_132708.known	chr7	+	2628	2	FSM	ENSG00000105974.13	ENST00000393467.1	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAGTCAGCTTTATTATT	116525089	True	NA	13	True	AATAAA	-15	NA	116526292	116561176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116526690_116558945
transcript_13271.known	chr1	+	2656	6	FSM	ENSG00000116667.15	ENST00000675061.1	2656	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.8442934498433	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCCTCTACCCAAA	184387256	False	NA	NA	False	NA	NA	NA	184387288	184621652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_184387369_184477385_184477604_184507597_184507683_184590738_184590816_184598400_184598462_184619517
transcript_132711.known	chr7	+	2652	3	FSM	ENSG00000105974.13	ENST00000405348.6	2652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCAGCTTTATTATTTTT	116525324	True	NA	16	True	AATAAA	-18	NA	116525530	116561179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116525784_116526524_116526690_116558945
transcript_132712.nnic	chr7	+	1924	12	NNC	ENSG00000105976.16	novel	741	6	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	9.21461290066441	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTGCATTCCTAGTTGTT	116723651	True	NA	31	True	AATAAA	-43	NA	116724043	116769909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_116724165_116724692_116724848_116731667_116731860_116739949_116740085_116740851_116741026_116755354_116755516_116757436_116757540_116757637_116757775_116758458_116758621_116759390_116759491_116763049_116763269_116769644
transcript_132718.known	chr7	+	5068	10	FSM	ENSG00000198898.15	ENST00000361183.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	82.062306951622	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTCGTTCATTGCAAATG	116847606	True	NA	NA	False	ATTAAA	-18	NA	116862586	116922049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910232_116910312_116912068_116912141_116916059_116916123_116917726
transcript_132719.known	chr7	+	621	2	FSM	ENSG00000198898.15	ENST00000461878.5	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGTGTGGTGGCATGCT	116847622	True	NA	NA	False	NA	NA	NA	116862602	116888699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126
transcript_132720.known	chr7	+	809	5	FSM	ENSG00000198898.15	ENST00000490693.5	809	5	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_1	84.1468210926592	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGTTTCTGTATTTTA	116847619	True	NA	NA	False	AATAAA	-18	NA	116862599	116904754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176
transcript_132721.known	chr7	+	1214	10	FSM	ENSG00000198898.15	ENST00000426421.5	1214	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	468.446710936958	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGATGTCTTTTGGTTTA	116847619	True	NA	NA	False	NA	NA	NA	116862599	116918188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116862651_116888126_116888191_116892993_116893046_116898771_116898836_116904176_116904384_116906262_116906343_116910212_116910312_116912068_116912141_116916059_116916123_116917726
transcript_132724.known	chr7	+	2093	16	FSM	ENSG00000004866.22	ENST00000323984.8	2093	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	24.912290585617	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGGGAACCTGGATC	116953477	False	NA	6	True	AATAAA	-19	NA	116953500	117230176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_116953692_117099761_117099845_117119560_117119721_117129792_117129848_117130490_117130607_117131884_117131961_117134123_117134193_117136080_117136236_117138434_117138533_117170861_117170977_117189320_117189394_117190833_117190937_117209786_117209938_117219083_117219177_117221922_117222063_117229761
transcript_132725.known	chr7	-	570	4	FSM	ENSG00000077063.11	ENST00000454375.5	570	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.5194802399374	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAGCTCTCAGGCAAAGT	-117872169	False	2573	-63	True	NA	NA	NA	117872220	117792661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_117792782_117810764_117810990_117861208_117861317_117872103
transcript_132726.nic	chr7	-	717	4	ISM	ENSG00000077063.11	ENST00000441556.5	5517	23	-93	81723	-81	0	5prime_fragment	FALSE	canonical	3	52	junction_3	12.3648246606609	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACGAATGAATTAGAA	-117870949	True	NA	13	True	NA	NA	NA	117873522	117792585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_117792782_117810764_117810990_117861208_117861317_117873334
transcript_132727.known	chr7	-	5904	23	FSM	ENSG00000077063.11	ENST00000160373.8	5904	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	14.6930016511488	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGCTGTACTTTTTA	-117870868	True	NA	-3	True	AATAAA	-18	NA	117873441	117710650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_117711783_117718017_117718120_117719503_117719637_117721066_117721131_117724546_117724733_117725051_117725258_117728088_117728268_117734912_117735101_117735268_117735422_117745830_117745931_117746012_117746100_117756554_117756635_117757874_117757971_117760434_117760711_117767058_117767177_117777510_117777766_117780440_117780592_117782861_117782962_117784250_117784455_117791127_117792782_117810764_117810990_117861208_117861317_117873334
transcript_132736.known	chr7	+	12384	4	FSM	ENSG00000128534.8	ENST00000249299.7	12384	4	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	64.3238334954903	4665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGAATGTCCATGTTTTT	118177815	True	NA	NA	False	AATAAA	-18	NA	118184163	118204035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_118184255_118185653_118185695_118188277_118188406_118191911
transcript_132740.nic	chr7	+	647	4	NIC	ENSG00000128534.8	novel	1920	3	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_1	329.940398658101	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177714	True	NA	29	True	ATTAAA	-29	NA	118184062	118192164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_118184281_118185646_118185695_118188277_118188406_118191911
transcript_132745.known	chr7	+	4030	3	FSM	ENSG00000128534.8	ENST00000424702.1	4030	3	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_1	78.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAAACCTTTTTTTTT	118177795	True	NA	20	True	ATTAAA	-20	NA	118184143	118192155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_118184255_118185653_118185695_118188277
transcript_132747.known	chr7	+	290	3	FSM	ENSG00000128534.8	ENST00000411938.1	290	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	365.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTAAAATATATCTGTT	118177818	True	NA	NA	False	NA	NA	NA	118184166	118188405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_118184281_118185646_118185695_118188277
transcript_132750.known	chr7	+	1920	3	FSM	ENSG00000128534.8	ENST00000422760.1	1920	3	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_2	33.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTTTTTTTGCCTAAATA	118177807	True	NA	29	True	ATTAAA	-29	NA	118184155	118192164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_118185695_118188277_118188406_118191911
transcript_132752.nnic	chr7	+	1429	7	NNC	ENSG00000106013.15	novel	744	6	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	3.35410196624968	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAGGAAAACATTATAAA	118214479	True	NA	10	True	AATAAA	-25	NA	118214622	118242692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_118215085_118234430_118234546_118234700_118234875_118236040_118236148_118236789_118236927_118239908_118239999_118242348
transcript_132754.nic	chr7	+	1130	7	NIC	ENSG00000106013.15	novel	744	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	2.73353657780945	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGAAGGAAAACATTATAAA	118214498	True	NA	10	True	AATAAA	-25	NA	118214641	118242692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_118214805_118234430_118234546_118234700_118234875_118236040_118236148_118236789_118236927_118239908_118239999_118242348
transcript_132759.known	chr7	-	1495	9	FSM	ENSG00000106025.9	ENST00000415871.5	1495	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	54.675748737443	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTCATACCCACTGTGTAG	-120858312	True	NA	NA	False	NA	NA	NA	120858323	120788373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819_120857989_120858203
transcript_132764.known	chr7	-	2585	8	FSM	ENSG00000106025.9	ENST00000222747.8	2585	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	20.735457160947	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTCTCTGCCTACTT	-120856536	True	NA	-2	True	AATAAA	-18	NA	120858144	120787319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_120788898_120806548_120806693_120810462_120810571_120815728_120815804_120838776_120838913_120840026_120840110_120856697_120856834_120857819
transcript_132771.nnic	chr7	-	523	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-10	-16349	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	28	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	-120857352	False	NA	-14	True	AATAAA	-19	NA	120857363	120855125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_120855382_120856697_120856834_120857232
transcript_132773.nnic	chr7	-	910	3	NNC	ENSG00000106025.9	novel	2585	8	NA	NA	-14	-16349	intron_retention	FALSE	canonical	3	60	junction_1	65.5	175	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTAATACTTTACATTG	NA	False	NA	-14	True	AATAAA	-19	NA	120858337	120855125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_120855382_120856697_120856834_120857819
transcript_132775.known	chr7	+	3749	12	FSM	ENSG00000071243.16	ENST00000315870.10	3749	12	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	29.1728958322562	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCTGAGTGTTTGATAA	120949748	True	NA	12	True	AATAAA	-22	NA	120950776	120977216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120964741_120964839_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_132778.known	chr7	+	1718	11	FSM	ENSG00000071243.16	ENST00000427726.5	1718	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	53.9926846896874	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGCTTCTAAAAAGAA	120949756	True	NA	NA	False	TATAAA	-22	NA	120950784	120975290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120966625_120966698_120967528_120967649_120967933_120968092_120969010_120969205_120970687_120970881_120973204_120973244_120974727
transcript_132780.known	chr7	+	1222	5	FSM	ENSG00000071243.16	ENST00000339121.9	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	78.8257572117135	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTATTCATCTC	NA	False	NA	9	True	CATAAA	-20	NA	120950762	120956980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558_120955625_120956159
transcript_132783.known	chr7	+	1723	4	FSM	ENSG00000071243.16	ENST00000445699.5	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_3	13.589211407093	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTATTCATC	120949766	True	NA	7	True	CATAAA	-18	NA	120950794	120956978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_120950925_120951163_120951236_120953303_120953405_120955558
transcript_132792.known	chr7	-	2455	10	FSM	ENSG00000196937.11	ENST00000359943.8	2455	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_7	196.126061753061	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATACTCTTGGTTTTGCT	-121390588	True	NA	-28	True	AATAAA	-28	NA	121396308	121348877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_121350551_121351142_121351270_121360042_121360128_121362896_121362948_121364129_121364189_121371299_121371424_121372109_121372140_121378909_121379015_121382956_121383011_121396161
transcript_132795.nic	chr7	-	677	2	ISM	ENSG00000196937.11	ENST00000426156.1	662	9	-74	22463	-18	-19850	5prime_fragment	FALSE	canonical	3	638	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAACCTAAAGACTGTATA	-121390662	True	NA	NA	False	NA	NA	NA	121396382	121382554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_121383011_121396161
transcript_132798.known	chr7	+	8103	30	FSM	ENSG00000106278.12	ENST00000393386.7	8103	30	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_3	129.828634881509	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTGCTTGTGGAGC	121865248	True	NA	9	True	AATAAA	-19	NA	121873160	122062036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122013890_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_132799.known	chr7	+	5633	31	FSM	ENSG00000106278.12	ENST00000651065.1	5633	31	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_23	166.487436963474	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAACACCTTACCAAAC	121865176	True	NA	-70	True	AATAGA	-31	NA	121873088	122061957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381_121996567_121997879_121998007_122004613_122004661_122010333_122011310_122019123_122019269_122028551_122028644_122031473_122031560_122034094_122034116_122034281_122034379_122036599_122036683_122038754_122038890_122039453_122039589_122040815_122040980_122042607_122042744_122044421_122044569_122047673_122047791_122051427_122051522_122051865_122051940_122053909_122054039_122054940_122055088_122058799_122058943_122059752_122059889_122061079
transcript_132802.nic	chr7	+	2629	9	ISM	ENSG00000106278.12	ENST00000449182.1	4627	29	-261	63679	11	-15630	5prime_fragment	FALSE	canonical	3	248	junction_3	23.6507795854598	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTAGCTTTCCAGTTCTTC	121865187	True	NA	NA	False	AAAAAG	-17	NA	121873099	121997682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_121873558_121928155_121928222_121967950_121968131_121972540_121972693_121976172_121976269_121976784_121976852_121983664_121983823_121983966_121984118_121996381
transcript_132812.nic	chr7	+	1817	2	ISM	ENSG00000106278.12	ENST00000471837.1	568	3	-61	37509	11	-37509	5prime_fragment	FALSE	canonical	3	278	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTCAAGCCAGGTG	121865187	True	NA	NA	False	NA	NA	NA	121873099	121929514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_121873558_121928155
transcript_132817.known	chr7	-	5774	24	FSM	ENSG00000008311.16	ENST00000679511.1	5774	24	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_23	1377.73664149145	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	-122099915	True	NA	7	True	NA	NA	NA	122144239	122073582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101370_122101439_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133735_122144160
transcript_132822.known	chr7	-	5728	23	FSM	ENSG00000008311.16	ENST00000679847.1	5728	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	1392.71120406705	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTCAAGTTGTTATAAAA	-122099930	True	NA	7	True	NA	NA	NA	122144254	122073582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122098744_122098867_122101620_122101681_122113117_122113230_122113597_122113721_122115073_122115223_122116632_122116761_122116878_122116958_122118306_122118454_122118562_122118631_122126374_122126460_122129360_122129538_122133516_122133742_122144160
transcript_13283.nic	chr1	-	1166	5	ISM	ENSG00000135842.17	ENST00000367511.4	6884	14	-3	93191	-3	3516	5prime_fragment	FALSE	canonical	3	13	junction_1	4.03112887414927	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGCCACAGATGG	-184973632	True	NA	NA	False	NA	NA	NA	184974511	184884222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_184884801_184890107_184890223_184894074_184894207_184899178_184899310_184974301
transcript_132834.known	chr7	-	1816	13	FSM	ENSG00000008311.16	ENST00000473553.5	1816	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_10	1430.00958378684	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGGAGTGCAGTGGCGC	-122099931	True	NA	72	True	NA	NA	NA	122144255	122076148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122076608_122077837_122078015_122078861_122078951_122079596_122079713_122081499_122081596_122086011_122086180_122091702_122091844_122092842_122092952_122093047_122093159_122098449_122098577_122101370_122101439_122101620_122101681_122144160
transcript_132855.nnic	chr7	+	1165	2	NNC	ENSG00000234418.3	novel	1460	5	NA	NA	0	-37625	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCTTCTGGTCCATATTT	122144006	True	NA	2	True	ATTAAA	-14	NA	122144412	122177140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_122144497_122176059
transcript_132856.known	chr7	+	472	3	FSM	ENSG00000234418.3	ENST00000446053.1	472	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATATGAATATTATTTT	NA	False	NA	NA	False	AATAAA	-29	NA	122216346	122218437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_122216463_122216968_122217029_122218141
transcript_132860.nnic	chr7	+	1509	5	NNC	ENSG00000230316.8	novel	3039	4	NA	NA	-47	-938	intron_retention	FALSE	canonical	3	10	junction_2	4.02336923485777	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATGCATGCTTTGTATAG	122304679	True	NA	14	True	AAAAAG	-20	NA	122304902	122307619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_122305188_122305287_122305368_122305884_122306263_122306515_122306661_122306998
transcript_132862.known	chr7	-	2435	4	FSM	ENSG00000128610.12	ENST00000442488.7	2435	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0.471404520791032	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGGGCTCTGTTCATAC	-122304736	False	357	-20	True	AATAAA	-31	NA	122304750	122301302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122302356_122302798_122302932_122303176_122303312_122303636
transcript_132868.known	chr7	-	688	2	FSM	ENSG00000128610.12	ENST00000418046.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCGCGCACCCCAGAGC	-122310334	True	NA	NA	False	NA	NA	NA	122310691	122304330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_122304512_122310184
transcript_132869.known	chr7	+	768	2	ISM	ENSG00000230316.8	ENST00000437317.2	3039	4	0	2862	0	-2740	5prime_fragment	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACAGGTGCACTTGTGCC	122304726	True	NA	NA	False	NA	NA	NA	122304949	122305817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_122305188_122305287
transcript_132870.known	chr7	+	886	4	FSM	ENSG00000230316.8	ENST00000653165.1	886	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAGTAGAGGTAAATAAAAA	122306693	False	NA	41	True	ATTAAA	-40	NA	122306997	122310119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_122307088_122307299_122307489_122308486_122308558_122309583
transcript_132874.nnic	chr7	+	585	4	NNC	ENSG00000232524.1	novel	451	3	NA	NA	-16188	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_1	0.816496580927726	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTATTAACAAAATATT	NA	False	NA	NA	False	AATAAA	-36	NA	123440440	123459856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_123440571_123456624_123456766_123457398_123457549_123459692
transcript_132877.known	chr7	+	451	3	FSM	ENSG00000232524.1	ENST00000419832.1	451	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATTTATTAACAAAATATT	NA	False	NA	NA	False	AATAAA	-36	NA	123456628	123459856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_123456766_123457398_123457549_123459692
transcript_132879.known	chr7	-	1905	6	FSM	ENSG00000128609.16	ENST00000677391.1	1905	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	1219.53886366938	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGC	-123542288	True	NA	85	True	NA	NA	NA	123557781	123540909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123551367_123551577_123557403_123557449_123557624
transcript_13288.known	chr1	+	3407	7	FSM	ENSG00000121481.11	ENST00000367510.8	3407	7	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	34.5253530032641	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTAGCAACCTCTATTCT	185043389	True	NA	NA	False	ATTAAA	-25	NA	185045557	185102603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185093060_185093277_185098071_185098345_185099790_185099963_185100199
transcript_132881.known	chr7	-	5608	5	FSM	ENSG00000128609.16	ENST00000471770.5	5608	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	1112.89296430519	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTGTGTGTATGTGC	-123542287	True	NA	NA	False	TATAAA	-18	NA	123557780	123536996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557403_123557449_123557624
transcript_132885.known	chr7	-	1685	4	FSM	ENSG00000128609.16	ENST00000676516.1	1685	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1185.87023835756	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGC	-123542322	True	NA	85	True	NA	NA	NA	123557815	123540909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557624
transcript_132886.known	chr7	-	1504	4	FSM	ENSG00000128609.16	ENST00000611607.4	1504	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	1159.00685454784	794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	NA	False	NA	-35	True	AATAAA	-24	NA	123557904	123541029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123550469_123550587_123557774
transcript_132890.known	chr7	-	1432	4	FSM	ENSG00000128609.16	ENST00000618945.4	1432	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1038.58921405701	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCCCTGTCATTCCTAAA	NA	False	NA	-35	True	AATAAA	-24	NA	123557904	123541029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123557403_123557449_123557774
transcript_132891.known	chr7	-	1429	6	FSM	ENSG00000128609.16	ENST00000378795.9	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1168.51290108411	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCTTAAGGTTAAACAAAAA	-123542311	True	NA	-82	True	AAAACA	-33	NA	123557804	123541076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123544734_123544762_123545610_123545677_123550469_123550587_123557403_123557449_123557774
transcript_132892.known	chr7	-	1803	7	FSM	ENSG00000128609.16	ENST00000467117.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1002.8207577739	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	-123542311	True	NA	-50	True	AATAAA	-9	NA	123557804	123541044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123546657_123546818_123550469_123550587_123551367_123551577_123557403_123557449_123557774
transcript_132893.known	chr7	-	1670	6	FSM	ENSG00000128609.16	ENST00000679052.1	1670	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1175.77099811145	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCGCCTTCCTAGCTC	-123542312	True	NA	-50	True	AATAAA	-9	NA	123557805	123541044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123542221_123545610_123545677_123546582_123546818_123550469_123550587_123557403_123557449_123557774
transcript_132894.known	chr7	-	2802	2	FSM	ENSG00000128609.16	ENST00000490618.1	2802	2	0	0	0	0	multi-exon	FALSE	canonical	3	1590	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGATA	-123542329	True	NA	NA	False	AAAAAG	-1	NA	123557822	123554694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123557449_123557774
transcript_132895.known	chr7	+	2287	3	FSM	ENSG00000170807.12	ENST00000458573.3	2287	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGGGTCCTAAGCATT	NA	False	NA	NA	False	ATTAAA	-28	NA	123655865	123664290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_123656237_123661859_123663204_123663718
transcript_132898.known	chr7	-	4363	11	FSM	ENSG00000106299.8	ENST00000223023.5	4363	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	38.2721831099299	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATAATGTGTTTCATGT	-123740890	True	NA	-16	True	AATAAA	-22	NA	123749003	123681942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123684581_123689041_123689151_123692346_123692868_123694714_123694869_123695822_123695866_123696578_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_132899.nic	chr7	-	965	6	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-129	14698	-129	-14698	5prime_fragment	FALSE	canonical	3	159	junction_2	39.9969998874916	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGGAAAAGCTAAAAAGAA	-123749102	False	NA	-4	True	AAGAAA	-6	NA	123749132	123696640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_123696748_123704633_123704658_123706276_123706374_123706739_123706827_123709088_123709224_123748617
transcript_132900.nic	chr7	-	785	4	ISM	ENSG00000106299.8	ENST00000223023.5	4363	11	-129	24383	-129	-24383	5prime_fragment	FALSE	canonical	3	202	junction_1	25.3113940087595	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCGAAAAGCAGTTACAGA	-123749102	False	NA	NA	False	AATGAA	-16	NA	123749132	123706325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_123706374_123706739_123706827_123709088_123709224_123748617
transcript_132901.known	chr7	-	107	1	FSM	ENSG00000201104.1	ENST00000364234.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	123790711	123790604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_123790600_123790700
transcript_132902.nnic	chr7	-	475	4	Antisense	novelGene_ENSG00000106304.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	1	junction_1	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGCTGATCCTTTGTTTA	-123946020	True	NA	NA	False	AATAAA	-26	NA	123946107	123943123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_123943338_123944755_123944820_123945223_123945378_123946064
transcript_132908.nnic	chr7	+	597	4	NNC	ENSG00000242593.7	novel	1613	11	NA	NA	0	-221760	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.4142135623731	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGTTTTGT	124032443	False	NA	8	True	AATAAA	-21	NA	124032457	124090568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_124032680_124049131_124049225_124077246_124077373_124090412
transcript_132909.nnic	chr7	+	574	4	NNC	ENSG00000242593.7	novel	1613	11	NA	NA	0	-221760	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	0.942809041582063	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCAGGTGTTTTGT	124032443	False	NA	8	True	AATAAA	-21	NA	124032457	124090568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_124032680_124049131_124049225_124077246_124077373_124090435
transcript_132917.nnic	chr7	+	743	2	Antisense	novelGene_ENSG00000279419.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCTCTAGTTGAA	NA	False	NA	NA	False	TATAAA	-27	NA	124729406	124746896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_124729703_124746449
transcript_132920.known	chr7	-	5298	2	FSM	ENSG00000170775.3	ENST00000303921.3	5298	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	TAAACAACAAAAAAAAAAAA	-124765782	False	NA	NA	False	NA	NA	NA	124765792	124743884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124747344_124763953
transcript_132924.known	chr7	-	3145	19	FSM	ENSG00000128513.16	ENST00000653241.1	3145	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	18.2185802593579	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAATTTTATACAAACA	-124927964	True	NA	29	True	TTTAAA	-9	NA	124929801	124823375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929558
transcript_132925.known	chr7	-	2877	19	FSM	ENSG00000128513.16	ENST00000668382.1	2877	19	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_18	15.2990760634445	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCTAATAAAAGTGGTCAG	-124929726	True	NA	-46	True	NA	NA	NA	124929944	124823548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124870910_124871042_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124928997_124929793
transcript_13293.known	chr1	+	1677	6	FSM	ENSG00000121481.11	ENST00000367509.8	1677	6	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	129.852839784119	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTTTGAGAGTGCTTTTTT	185044999	False	NA	22	True	ATTAAA	-29	NA	185045525	185101057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185045650_185087551_185087641_185091578_185091740_185098071_185098345_185099790_185099963_185100199
transcript_132931.known	chr7	-	3950	18	FSM	ENSG00000128513.16	ENST00000393329.5	3950	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	17.1035923703858	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTTTGGTTTATTGTG	-124929765	False	NA	-3	True	AATAAA	-17	NA	124929983	124822386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_124824075_124825251_124825358_124827213_124827306_124829253_124829343_124835278_124835415_124840972_124841179_124842806_124842964_124846941_124846999_124851871_124851952_124852971_124853139_124858956_124859113_124863349_124863641_124892265_124892381_124897164_124897213_124898260_124898375_124915573_124915647_124928814_124929000_124929793
transcript_132938.nnic	chr7	+	645	6	NIC	ENSG00000224897.9	novel	689	7	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.979795897113271	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTACTCAGTCTCAG	124929780	True	NA	NA	False	AATAAA	-12	NA	124929861	125102050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_124930017_124940279_124940386_125020332_125020414_125080711_125080814_125099403_125099514_125101959
transcript_132940.nnic	chr7	+	543	5	FSM	ENSG00000224897.9	ENST00000688691.1	541	5	-11	9	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAATTACTCAGTCTCAG	124929780	True	NA	NA	False	AATAAA	-12	NA	124929861	125102050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_124930017_124940279_124940386_125020332_125020414_125099403_125099514_125101959
transcript_132942.known	chr7	+	667	3	FSM	ENSG00000224897.9	ENST00000659682.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATGGTTTCCATGAACT	124929801	True	NA	NA	False	AATAAA	-39	NA	124929882	124992289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_124930017_124940279_124940386_124991862
transcript_132943.nnic	chr7	+	730	3	NNC	ENSG00000224897.9	novel	1244	6	NA	NA	67376	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCAAGTAATTCTTTTTC	125262070	True	NA	NA	False	AATAAA	-15	NA	125262099	125466764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_125262252_125347124_125347208_125466269
transcript_132965.nnic	chr7	-	1836	3	NNC	ENSG00000219445.2	novel	1918	5	NA	NA	-47	124	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.5	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAGGTAGTATCT	-125264290	False	48	NA	False	ATTAAA	-21	NA	125264338	125229454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_125230842_125262091_125262245_125264042
transcript_132968.nnic	chr7	-	1783	2	NIC	ENSG00000219445.2	novel	1918	5	NA	NA	-147	124	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	67	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAGGTAGTATCT	-125264390	True	NA	NA	False	ATTAAA	-21	NA	125264438	125229454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_125230842_125264042
transcript_13298.known	chr1	-	4361	15	FSM	ENSG00000121486.12	ENST00000367506.10	4361	15	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_13	14.2006395371936	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACGAGTTAAGGAAACCAG	-185155179	True	NA	-20	True	ATTAAA	-16	NA	185156953	185118100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185120272_185120382_185120510_185123856_185123920_185124943_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_13300.nic	chr1	-	2124	12	ISM	ENSG00000121486.12	ENST00000367506.10	4361	15	-20	6739	-20	0	5prime_fragment	FALSE	canonical	3	173	junction_10	14.3992653623442	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTAGTAAATC	-185155199	True	NA	NA	False	AATAAA	-18	NA	185156973	185124839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_185125111_185128668_185128748_185137605_185137797_185139366_185139580_185139972_185140223_185143356_185143437_185143905_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156477
transcript_13301.known	chr1	-	735	4	FSM	ENSG00000121486.12	ENST00000458395.1	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	15.5777619273972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGTTTTTAGTAAATC	NA	False	NA	NA	False	AATAAA	-18	NA	185139560	185124839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185125111_185128668_185128748_185137605_185137797_185139366
transcript_13302.known	chr1	-	619	6	FSM	ENSG00000121486.12	ENST00000487028.1	619	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	78.3081094140319	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGAAACTAAATCGGTAAGA	-185157056	True	NA	NA	False	AAAACA	-22	NA	185157072	185143919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185144030_185145438_185145569_185147181_185147247_185150378_185150493_185151824_185151936_185156983
transcript_133021.known	chr7	+	837	5	FSM	ENSG00000197462.3	ENST00000411856.1	837	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33.176610737084	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGAAAGTGACATCCTG	125917026	True	NA	NA	False	NA	NA	NA	125917870	125933832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_125918119_125920056_125920154_125923693_125923951_125924211_125924388_125933773
transcript_133025.known	chr7	-	4128	2	FSM	ENSG00000179562.3	ENST00000321407.3	4128	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTGGTTCCTTAATAG	-127583805	True	NA	-15	True	ATTAAA	-15	NA	127585596	127580627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_127583310_127584150
transcript_133026.known	chr7	+	1509	5	FSM	ENSG00000004059.11	ENST00000463733.5	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_3	96.2366873910361	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTGCTGTGGTTTGTAC	127571095	True	NA	3	True	NA	NA	NA	127588385	127591681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127590138_127590962_127591089_127591212
transcript_133027.known	chr7	+	1032	6	FSM	ENSG00000004059.11	ENST00000000233.10	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	86.751599408887	2695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGTGTTGTCTGTAGCCT	127571120	True	NA	22	True	AATAAA	-17	NA	127588410	127591700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962_127591089_127591212
transcript_133028.known	chr7	+	566	5	FSM	ENSG00000004059.11	ENST00000489673.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	1344	junction_4	93.9078670825826	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATCCTGCCTCTTGAGGG	127571122	True	NA	NA	False	NA	NA	NA	127588412	127591112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127588566_127589082_127589164_127589484_127589595_127590065_127590138_127590962
transcript_13303.known	chr1	+	3838	19	FSM	ENSG00000116668.13	ENST00000367500.9	3838	19	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	8.82634244677003	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACTAGTTGGTGTAGA	185156520	True	NA	3	True	AATAAA	-18	NA	185157166	185291781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_185157315_185160832_185160926_185166571_185166653_185168339_185168399_185174371_185175114_185180390_185180451_185181945_185182058_185184242_185184345_185184742_185184932_185190548_185190643_185202653_185202800_185204699_185204864_185206624_185206764_185214506_185214656_185221848_185222037_185231576_185231709_185271322_185271390_185276603_185276669_185290673
transcript_133030.known	chr7	+	3448	24	FSM	ENSG00000197157.11	ENST00000354725.8	3448	24	0	0	0	0	multi-exon	FALSE	canonical	3	1220	junction_16	123.55397250183	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTATTGATCACAGTGT	127638562	True	NA	25	True	AATAAA	-20	NA	127652193	128092593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_127652452_127686612_127686763_127694827_127694949_127698874_127698954_127701162_127701324_127702434_127702527_127703164_127703324_127704838_127704946_127707556_127707648_127721286_127721401_127807483_127807574_127844323_127844425_127887901_127888013_127904746_127904820_127929187_127929330_127990946_127991057_128074501_128074691_128081359_128081502_128084723_128084848_128085710_128085781_128086937_128087052_128089488_128089693_128091836_128091882_128091992
transcript_133035.known	chr7	-	15507	19	FSM	ENSG00000106344.8	ENST00000223073.6	15507	19	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_12	25.9277248053169	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATAGCAGCATGATTTA	-128338111	True	NA	NA	False	AATAAA	-18	NA	128343908	128297684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128310932_128313174_128313275_128314763_128315021_128317658_128317734_128317956_128318107_128321265_128321425_128323526_128323592_128324558_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_133044.nic	chr7	-	1645	12	ISM	ENSG00000106344.8	ENST00000223073.6	15507	19	-22	26705	-22	-831	5prime_fragment	FALSE	canonical	3	173	junction_5	16.2272090653195	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCACTCGTTTTTGTGGA	NA	False	NA	NA	False	AATAAA	-21	NA	128343930	128324389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_128324695_128325817_128325892_128330818_128330929_128333289_128333363_128335542_128335680_128335846_128336043_128337130_128337203_128338249_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_133048.nic	chr7	-	1365	5	ISM	ENSG00000106344.8	ENST00000223073.6	15507	19	-22	39878	-22	717	5prime_fragment	FALSE	canonical	3	184	junction_1	8.67467578644874	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTATTGCCGTAGAGAT	NA	False	NA	NA	False	NA	NA	NA	128343930	128337562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128343675
transcript_133051.known	chr7	-	728	6	FSM	ENSG00000106344.8	ENST00000459726.1	728	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	90.5065743468396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAGGCATGAACATGAAA	-128338111	True	NA	NA	False	NA	NA	NA	128343908	128338279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128338343_128338725_128338802_128339226_128339322_128339632_128339792_128341117_128341220_128343675
transcript_133052.nic	chr7	-	403	2	ISM	ENSG00000106344.8	ENST00000478061.5	932	7	-56	4099	-22	-1364	5prime_fragment	FALSE	canonical	3	206	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAAAAATGGTGAGTTTC	NA	False	NA	3	True	AAGAAA	-27	NA	128343930	128339643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_128339792_128343675
transcript_133053.nic	chr7	-	2380	14	ISM	ENSG00000106348.18	ENST00000348127.10	2479	15	3989	0	-45	0	3prime_fragment	FALSE	canonical	1	63	junction_10	63.1330894400751	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-128402982	True	NA	-26	True	AATAAA	-3	NA	128405993	128392300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766
transcript_133055.known	chr7	-	2479	15	FSM	ENSG00000106348.18	ENST00000348127.10	2479	15	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_14	86.4446266079492	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGGTCTCAACGCCTCC	-128409016	True	NA	-26	True	AATAAA	-3	NA	128409982	128392300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128400816_128400892_128401014_128401117_128403705_128403755_128405766_128405866_128409755
transcript_133056.known	chr7	-	2283	13	FSM	ENSG00000106348.18	ENST00000496200.5	2283	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	79.9181438862429	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTCTGTATGCCCTGT	-128402937	True	NA	-3	True	AATAAA	-26	NA	128405948	128392277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128393029_128394277_128394362_128394455_128394600_128394888_128395034_128395130_128395275_128396599_128396696_128396931_128397023_128398413_128398614_128400094_128400183_128400332_128400540_128401014_128401117_128403705_128403755_128405766
transcript_13306.nnic	chr1	+	1108	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99827	-286	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	22.1710521977545	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGCAGTGACTGATG	NA	False	NA	6	True	AATAAA	-15	NA	185257308	185291495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_133062.nic	chr7	+	1316	9	NIC	ENSG00000165055.16	novel	5841	9	NA	NA	-7	92	combination_of_known_junctions	TRUE	canonical	3	13	junction_8	152.546714156681	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCCATGGAATTTTAAGCA	NA	False	NA	5	True	AATAAA	-17	NA	128476721	128502924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761_128501833_128502613
transcript_133067.known	chr7	+	5841	9	FSM	ENSG00000165055.16	ENST00000262432.13	5841	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	129.181981618955	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	128471288	True	NA	6	True	AATAAA	-18	NA	128476747	128506602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_13307.nnic	chr1	+	1301	4	NNC	ENSG00000116668.13	novel	3001	19	NA	NA	99827	-93	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	22.1710521977545	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTTTTTACTTCCA	NA	False	NA	4	True	AATAAA	-18	NA	185257308	185291688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_185257463_185271322_185271390_185276603_185276669_185290673
transcript_133071.known	chr7	+	5743	8	FSM	ENSG00000165055.16	ENST00000480046.5	5743	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	142.106312603039	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGCTCTGAATGGTATC	128471294	True	NA	6	True	AATAAA	-18	NA	128476753	128506602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_13309.known	chr1	-	3657	16	FSM	ENSG00000116679.16	ENST00000459929.5	3657	16	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	512.507543575919	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGGTGTCTAATGTGTAG	-185296895	True	NA	-1	True	GATAAA	-15	NA	185317273	185297014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185306484_185306626_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_133107.nic	chr7	+	977	6	NIC	ENSG00000165055.16	novel	977	8	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_5	154.478995335936	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACCTGCCATTCCAT	128471273	True	NA	1	True	AATAAA	-20	NA	128476732	128488597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_128476876_128477081_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128488322
transcript_13311.known	chr1	-	4113	15	FSM	ENSG00000116679.16	ENST00000367498.8	4113	15	0	0	0	0	multi-exon	TRUE	canonical	3	1506	junction_11	80.8084154033477	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGAGATCACTTCTCAT	-185296865	True	NA	-16	True	AATAAA	-28	NA	185317243	185296387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185298289_185299709_185299884_185299998_185300131_185300216_185300344_185300436_185300559_185300971_185301197_185301433_185301564_185305535_185305644_185307013_185307140_185307488_185307663_185308799_185308876_185309002_185309173_185309382_185309512_185311094_185311323_185316952
transcript_133116.nic	chr7	+	896	5	NIC	ENSG00000165055.16	novel	411	4	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	2	17	junction_4	178.433460987563	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAACCTGCCATTCCAT	NA	False	NA	1	True	AATAAA	-20	NA	128476721	128488597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_128476876_128479157_128479514_128480646_128480697_128488100_128488162_128488322
transcript_133135.known	chr7	+	1364	2	FSM	ENSG00000135245.10	ENST00000257696.5	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	0	1103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	128449353	True	NA	14	True	AATAAA	-19	NA	128455877	128458418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128456024_128457200
transcript_133137.known	chr7	+	785	2	FSM	ENSG00000135245.10	ENST00000435296.2	785	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAGCCTGTTTAATGCA	128449324	True	NA	NA	False	AAAAAG	-5	NA	128455848	128457924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128455910_128457200
transcript_133139.known	chr7	+	1370	2	FSM	ENSG00000135245.10	ENST00000481454.1	1370	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTCATGTTGACTTC	128449378	True	NA	14	True	AATAAA	-19	NA	128455902	128458418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128456701_128457846
transcript_13314.known	chr1	-	621	3	FSM	ENSG00000228309.7	ENST00000654367.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGGAATAGAAAGAGATTA	NA	False	NA	NA	False	AATAAA	-18	NA	185628517	185562882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185563329_185626491_185626556_185628406
transcript_133140.known	chr7	+	1590	8	FSM	ENSG00000165055.16	ENST00000482555.5	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	131.633070715996	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCTCGTTGATGCTGG	128471269	True	NA	NA	False	AATAAA	-12	NA	128476728	128502126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128477174_128479157_128479514_128480646_128480697_128488100_128488162_128493803_128493944_128498035_128498143_128500902_128500969_128501761
transcript_133141.known	chr7	-	448	1	FSM	ENSG00000213280.2	ENST00000393266.2	448	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	391	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGAGGATTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	128570688	128570240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128570200_128570700
transcript_133145.known	chr7	+	1574	8	FSM	ENSG00000135248.16	ENST00000485070.5	1574	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.91662969499982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAAATGTTTTCT	128708902	True	NA	NA	False	AGTAAA	-10	NA	128709060	128731611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128709208_128713922_128714133_128716812_128716998_128718891_128719084_128723196_128723319_128726833_128726872_128729901_128730070_128731099
transcript_133155.nic	chr7	+	429	2	ISM	ENSG00000135248.16	ENST00000493738.5	873	5	-35	9228	-6	-4884	5prime_fragment	FALSE	canonical	2	4	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGTCCTTTGTGTGTAA	128708896	True	NA	NA	False	AATACA	-15	NA	128709054	128714198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_128709208_128713922
transcript_133164.known	chr7	+	5266	7	FSM	ENSG00000128595.17	ENST00000249364.9	5266	7	0	0	0	0	multi-exon	FALSE	canonical	3	1763	junction_2	283.868171672854	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTCTTTGGAGCAACT	128703655	True	NA	21	True	AATAAA	-14	NA	128739358	128773400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128739433_128748572_128748805_128754261_128754456_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_133165.known	chr7	+	2438	7	FSM	ENSG00000128595.17	ENST00000449187.6	2438	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_3	897.549147524648	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAGGAAA	128703659	True	NA	27	True	NA	NA	NA	128739362	128770576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128739433_128748572_128748805_128754528_128754723_128758870_128759038_128759791_128759853_128767455_128767656_128769062
transcript_13317.nic	chr1	-	2512	17	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-157	1652	-157	-1652	5prime_fragment	FALSE	canonical	3	232	junction_3	26.9350346899721	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GCAGAAAATGAAAAAATACA	-186374503	False	NA	NA	False	AAAAAG	-6	NA	186375482	186355522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_133173.known	chr7	+	711	3	FSM	ENSG00000128524.5	ENST00000492758.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGATGGGTTGGGTGCTGG	128844385	True	NA	36	True	ATTAAA	-20	NA	128862903	128865844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128863063_128865119_128865204_128865376
transcript_133175.known	chr7	+	678	2	FSM	ENSG00000128524.5	ENST00000249289.5	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	1883	junction_1	0	16719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTTGGGTGCTGGAAA	128844337	True	NA	39	True	ATTAAA	-23	NA	128862855	128865847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_128863063_128865376
transcript_133179.known	chr7	-	4345	23	FSM	ENSG00000064419.14	ENST00000265388.10	4345	23	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_17	6.42068583654194	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTGTTTCTTTGTTTTTA	-129050570	True	NA	-6	True	AATAAA	-15	NA	129055111	128954184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_133180.known	chr7	-	4514	23	FSM	ENSG00000064419.14	ENST00000627585.2	4514	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	8.00516362281866	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTGTTTTTACTTTC	-129055161	False	NA	-1	True	AATAAA	-20	NA	129055173	128954179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990203_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129054650
transcript_133184.known	chr7	-	3585	24	FSM	ENSG00000064419.14	ENST00000482320.5	3585	24	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	8.53060763021267	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGACTAAACAGAAACCA	-129050552	True	NA	NA	False	AGTAAA	-17	NA	129055093	128955087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_128955386_128957223_128957316_128967279_128967393_128970147_128970316_128972425_128972583_128974867_128974963_128975818_128975936_128978982_128979124_128979970_128980032_128982247_128982325_128984167_128984260_128986728_128986921_128989960_128990101_128991998_128992091_128993806_128993915_128997388_128997536_129000428_129000568_129001058_129001235_129005015_129005160_129014978_129015136_129016982_129017057_129017956_129018158_129041556_129041718_129054650
transcript_133186.nnic	chr7	-	760	3	Genic_Genomic	ENSG00000238072.1	novel	258	1	NA	NA	-23970	300	multi-exon	FALSE	canonical	1	2	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTAGCTATCTCCTAGGAT	-129434275	False	NA	NA	False	AATAAA	-21	NA	129434340	129409812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_-_129410384_129433326_129433398_129434222
transcript_133187.known	chr7	+	3518	11	FSM	ENSG00000106459.15	ENST00000393232.6	3518	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	22.31793001154	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTGGAATTGTTCAT	129610593	True	NA	14	True	AATAAA	-19	NA	129611719	129757076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129611825_129657345_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_133188.known	chr7	+	2424	11	FSM	ENSG00000106459.15	ENST00000223190.8	2424	11	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	13.4922199804183	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	129610629	True	NA	15	True	ATTAAA	-24	NA	129611755	129756015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129755017
transcript_133190.known	chr7	+	513	3	FSM	ENSG00000106459.15	ENST00000477428.5	513	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAGTGATGTGTGTGTGTG	129610612	True	NA	NA	False	NA	NA	NA	129611738	129633780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129611825_129630077_129630169_129633444
transcript_133192.known	chr7	+	2481	12	FSM	ENSG00000106459.15	ENST00000311967.6	2481	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_11	38.1348195591629	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGAATTGCTCGTATAT	129610629	True	NA	15	True	ATTAAA	-24	NA	129611755	129756015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_129611825_129657342_129657575_129671428_129671544_129677631_129677759_129690405_129690547_129709074_129709234_129710373_129710572_129711474_129711577_129717218_129717377_129727240_129727366_129744172_129744230_129755017
transcript_133197.known	chr7	-	5162	7	FSM	ENSG00000186591.13	ENST00000355621.8	5162	7	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_3	36.4539283053128	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGGACCTTGATCAATA	-129944247	True	NA	0	True	AATAAA	-21	NA	129952960	129830731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880894_129880972_129952502
transcript_13320.known	chr1	-	9636	51	FSM	ENSG00000047410.14	ENST00000367478.9	9636	51	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_37	98.2437702859576	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTGTAATTCTTTAA	-186365834	True	NA	NA	False	AATAAA	-7	NA	186375253	186311651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_186314027_186314628_186314725_186317481_186317601_186318446_186318604_186318732_186318829_186320311_186320419_186322317_186322413_186322517_186322587_186323685_186323871_186325763_186325855_186326103_186326236_186327459_186327661_186331497_186331582_186332194_186332344_186333121_186333395_186334324_186334534_186335067_186335130_186335337_186335544_186336495_186336695_186337012_186337157_186338032_186338244_186339641_186339773_186341027_186341160_186341251_186341390_186343325_186343474_186343905_186344091_186344374_186344579_186345579_186345697_186346134_186346288_186347291_186347459_186350222_186350389_186351329_186351471_186351975_186352111_186353687_186353851_186355409_186355559_186355634_186355769_186356285_186356450_186357396_186357624_186358542_186358651_186359798_186359997_186360272_186360365_186360764_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_133207.known	chr7	-	561	7	FSM	ENSG00000186591.13	ENST00000496698.5	561	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	255.1901252008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTAGAAAAAGCACCTGC	-129942614	False	8713	NA	False	NA	NA	NA	129951327	129834940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_129835062_129839206_129839336_129857510_129857564_129858901_129858942_129879567_129879643_129880878_129880972_129951277
transcript_133208.known	chr7	-	1934	11	FSM	ENSG00000091732.17	ENST00000467642.5	1934	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	392.101313438249	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTCATTGTTGGAGAACT	-130048227	True	NA	-7	True	AATAAA	-13	NA	130051374	130018292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130050442_130050489_130051220
transcript_133211.nic	chr7	-	1632	8	NIC	ENSG00000091732.17	novel	1889	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	289.611492048452	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048233	True	NA	-6	True	AATAAA	-14	NA	130051380	130018291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130051220
transcript_133214.known	chr7	-	1889	10	FSM	ENSG00000091732.17	ENST00000358303.9	1889	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	287.088879428232	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048227	True	NA	-6	True	AATAAA	-14	NA	130051374	130018291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_133215.known	chr7	-	1741	10	FSM	ENSG00000091732.17	ENST00000481503.5	1741	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	369.761317742629	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGACAGTGTGTATTAATAA	-130048242	True	NA	-40	True	NA	NA	NA	130051389	130018325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130018733_130022318_130022526_130023510_130023724_130024262_130024378_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_133216.known	chr7	-	1676	9	FSM	ENSG00000091732.17	ENST00000360708.9	1676	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	391.958683249906	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTTGGAGAACTG	-130048227	True	NA	-6	True	AATAAA	-14	NA	130051374	130018291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130018733_130022318_130022526_130024262_130024507_130026157_130026313_130028901_130029030_130039463_130039548_130040950_130041102_130049032_130049145_130051220
transcript_133218.nnic	chr7	+	417	3	NNC	ENSG00000128607.14	novel	370	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGAGACCTTTTCTCTA	130069996	True	NA	NA	False	NA	NA	NA	130070533	130117666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_130070714_130116577_130116667_130117518
transcript_133221.known	chr7	-	3455	15	FSM	ENSG00000146842.17	ENST00000397622.7	3455	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_14	30.8263735480262	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGATGAAATGTCTTTTTT	-130202108	True	NA	-4	True	ATTAAA	-31	NA	130205406	130164712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130178401_130178528_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_133222.known	chr7	-	1961	14	FSM	ENSG00000146842.17	ENST00000473456.5	1961	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	65.4724297185803	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCAGTCTTTTTTTT	-130202105	True	NA	NA	False	NA	NA	NA	130205403	130166077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130166506_130170399_130170474_130173631_130173730_130173824_130173940_130175511_130175610_130181622_130181720_130184183_130184256_130185191_130185368_130192621_130192824_130201849_130202092_130202531_130202664_130203787_130203847_130203973_130204111_130205372
transcript_133225.known	chr7	-	2612	12	FSM	ENSG00000106477.20	ENST00000676115.1	2612	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	33.6289918211815	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGGTAAGATTTGCCTTA	-130439992	True	NA	NA	False	NA	NA	NA	130441010	130397575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130426628_130426760_130427954_130428019_130440933
transcript_133226.known	chr7	-	1700	11	FSM	ENSG00000106477.20	ENST00000675803.1	1700	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.8201365920443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTTGTTTTGTTTTT	-130439830	False	NA	NA	False	AAAAAG	-14	NA	130440848	130398594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440533
transcript_133227.known	chr7	-	2541	11	FSM	ENSG00000106477.20	ENST00000676243.1	2541	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	27.371700714424	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTAAGATTTGCCTTAAC	-130440041	True	NA	NA	False	NA	NA	NA	130441059	130397573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_133228.known	chr7	-	2465	11	FSM	ENSG00000106477.20	ENST00000674630.1	2465	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	28.2630500831032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	-130440028	True	NA	NA	False	NA	NA	NA	130441046	130397551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402800_130404639_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_13323.nic	chr1	-	1478	10	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-157	6969	-157	-6969	5prime_fragment	FALSE	canonical	3	245	junction_1	26.0104442460436	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTGAGAAAATAGGGAGA	-186374503	False	NA	12	True	AAAAAG	-4	NA	186375482	186360839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_186360906_186361621_186361710_186361788_186361870_186362287_186362381_186362836_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_133231.known	chr7	-	2589	10	FSM	ENSG00000106477.20	ENST00000675596.1	2589	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	25.7413535765044	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGTATGAGAAATAA	NA	False	NA	-74	True	NA	NA	NA	130441237	130397478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400706_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_133238.known	chr7	-	2010	7	FSM	ENSG00000106477.20	ENST00000674539.1	2010	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	33.8066397160216	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATTTTCTCGCCACCAA	-130440048	True	NA	NA	False	NA	NA	NA	130441066	130397551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_13324.nic	chr1	-	1144	6	ISM	ENSG00000047410.14	ENST00000613151.1	2478	18	-157	8972	-157	-8972	5prime_fragment	FALSE	canonical	3	258	junction_2	23.6186367091752	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGTTAGTAAAA	-186374503	False	NA	14	True	AATAAA	-4	NA	186375482	186362842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_186363002_186363341_186363446_186367885_186367983_186370969_186371044_186373358_186373464_186374877
transcript_133240.known	chr7	-	3161	3	FSM	ENSG00000106477.20	ENST00000489512.5	3161	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	44	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGAAATGAAGTGTAGACA	-130440038	True	NA	NA	False	AATAAA	-39	NA	130441056	130419033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130422008_130427954_130428019_130440933
transcript_133242.known	chr7	-	1272	11	FSM	ENSG00000106477.20	ENST00000675935.1	1272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.5392711890125	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-130440060	True	NA	-6	True	AATAAA	-21	NA	130441078	130398843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400038_130400255_130400706_130400822_130401880_130401949_130402647_130402791_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_133243.known	chr7	-	1012	10	FSM	ENSG00000106477.20	ENST00000343969.10	1012	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29.8804201137273	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTGAGCATTTCCCAAGT	-130439998	True	NA	-6	True	AATAAA	-21	NA	130441016	130398843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130399040_130400697_130400822_130401880_130401949_130402647_130402800_130404563_130404709_130411121_130411192_130412178_130412241_130416918_130416967_130427954_130428019_130440933
transcript_133244.known	chr7	-	3134	24	FSM	ENSG00000158623.14	ENST00000425248.5	3134	24	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_7	15.3210136530609	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTATACTTGAAGTTGC	-130660597	True	NA	-33	True	AATAAA	-20	NA	130668748	130506237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_130506807_130507273_130507373_130507684_130507824_130508561_130508660_130547673_130547846_130548402_130548543_130549313_130549377_130550523_130550650_130551240_130551345_130552354_130552431_130554480_130554725_130555036_130555133_130561032_130561222_130563268_130563337_130564259_130564394_130610952_130611111_130612151_130612239_130613543_130613637_130616989_130617066_130652868_130652949_130662966_130663039_130666848_130666930_130667481_130667535_130668631
transcript_133247.known	chr7	+	2443	12	FSM	ENSG00000106484.16	ENST00000341441.9	2443	12	0	0	0	0	multi-exon	TRUE	canonical	3	809	junction_1	163.03586787844	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486170	130506292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_133252.nic	chr7	+	2407	12	NIC	ENSG00000106484.16	novel	2443	12	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_1	335.282587115914	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	130477317	True	NA	16	True	AATAAA	-18	NA	130486330	130506292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130500788_130500891_130502643_130502721_130503932_130503997_130504938
transcript_133255.known	chr7	+	2337	11	FSM	ENSG00000106484.16	ENST00000416162.7	2337	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	359.358609191431	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGACTCTGGCTTCCCCTC	NA	False	NA	16	True	AATAAA	-18	NA	130486174	130506292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130486396_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_133259.known	chr7	+	2473	11	FSM	ENSG00000106484.16	ENST00000427521.6	2473	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	458.229429434645	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGACCAAGTAGAATAAAAAG	130477322	True	NA	NA	False	NA	NA	NA	130486335	130506465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_130486520_130495367_130495523_130497155_130497236_130497935_130498014_130498138_130498276_130498418_130498478_130499874_130499916_130500461_130500533_130502643_130502721_130503932_130503997_130504938
transcript_133264.known	chr7	+	2448	18	FSM	ENSG00000128585.18	ENST00000458153.5	2448	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	86.8920102960404	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATATATATATATATATAT	131322094	True	NA	13	True	AATAAA	-25	NA	131327896	131487962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399237_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622_131478678_131487606
transcript_133267.known	chr7	+	2386	17	FSM	ENSG00000128585.18	ENST00000494785.5	2386	17	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_11	24.1621313991543	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGAATGCAGGCTGTTTT	131322080	True	NA	NA	False	AATAAA	-20	NA	131327882	131478960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_131327998_131375423_131375494_131387119_131387263_131388883_131388973_131397266_131397377_131399240_131399434_131411305_131411384_131414644_131414711_131429032_131429146_131437784_131437998_131443480_131443703_131445773_131445904_131463216_131463365_131464293_131464409_131466275_131466416_131470841_131470945_131478622
transcript_133279.nic	chr7	+	1087	2	ISM	ENSG00000128585.18	ENST00000494785.5	2386	17	-35	102600	2	-22937	5prime_fragment	FALSE	canonical	3	401	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGCGCGGTGGCTCA	131322045	True	NA	NA	False	NA	NA	NA	131327847	131376360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_131327998_131375423
transcript_133280.known	chr7	+	406	1	FSM	ENSG00000233287.1	ENST00000427253.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTAGATGCTTCGTTTTG	NA	False	NA	NA	False	NA	NA	NA	131242589	131242995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_131242600_131243000
transcript_133281.known	chr7	-	1900	7	FSM	ENSG00000236753.7	ENST00000670684.1	1900	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.71404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAACCCTGTCTCTACT	-131327605	True	NA	NA	False	NA	NA	NA	131327763	131309926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131310774_131311129_131311224_131321878_131321932_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_133283.known	chr7	-	2043	6	FSM	ENSG00000236753.7	ENST00000429067.5	2043	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.15363949069005	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-131327618	True	NA	NA	False	NA	NA	NA	131327776	131309743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131310774_131311129_131311224_131323364_131323869_131324302_131324426_131326805_131326936_131327614
transcript_133286.known	chr7	-	1497	4	FSM	ENSG00000236753.7	ENST00000444245.6	1497	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCCGTCTCTACTAAAA	-131327588	True	NA	NA	False	NA	NA	NA	131327746	131322767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326896_131327614
transcript_133287.known	chr7	-	1349	4	FSM	ENSG00000236753.7	ENST00000416220.6	1349	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.78423336480244	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	-131327566	True	NA	NA	False	TTTAAA	-41	NA	131327724	131322842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324302_131324426_131326805_131326896_131327614
transcript_133288.nic	chr7	-	1918	4	ISM	ENSG00000236753.7	ENST00000670684.1	1900	7	-49	12475	-33	243	5prime_fragment	FALSE	canonical	2	6	junction_3	3.39934634239519	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTCTCAGGTAGTTCTT	-131327732	False	NA	NA	False	ATTAAA	-21	NA	131327812	131322401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_131323869_131324302_131324426_131326805_131326936_131327614
transcript_133289.known	chr7	-	578	4	FSM	ENSG00000236753.7	ENST00000447514.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	4.32049379893857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTGCCATCTGACA	-131328142	False	NA	NA	False	NA	NA	NA	131328222	131323776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324302_131324426_131326805_131326936_131327989
transcript_13329.nnic	chr1	+	1813	15	NNC	ENSG00000157181.16	novel	3820	14	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_11	50.9067274332105	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTTGTTTAGCCTGCT	186374154	True	NA	6	True	ATTAAA	-13	NA	186375785	186419233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186411810_186411894_186417543_186417655_186419008
transcript_133293.known	chr7	-	1510	4	FSM	ENSG00000236753.7	ENST00000454515.6	1510	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.02768199119819	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCGTCTCTACTAAAAAT	-131327559	True	NA	NA	False	NA	NA	NA	131327717	131322765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_131323869_131324251_131324426_131326805_131326936_131327614
transcript_133298.nnic	chr7	-	686	2	NNC	ENSG00000106554.13	novel	1604	8	NA	NA	-148	-44996	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	0	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGACTGTCGAACTCAGT	NA	False	NA	NA	False	ATTAAA	-17	NA	133082238	133080744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_133081049_133081856
transcript_133300.nnic	chr7	-	618	2	NNC	ENSG00000106554.13	novel	1604	8	NA	NA	-148	-45064	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	0	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTAAAAACTTTTTCTTC	NA	False	NA	NA	False	AATAAA	-20	NA	133082238	133080812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_133081049_133081856
transcript_133302.known	chr7	-	1604	8	FSM	ENSG00000106554.13	ENST00000262570.10	1604	8	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_6	59.3859737442354	5334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGCATTGTAGCTCCTC	-133064552	True	NA	-12	True	AATAAA	-17	NA	133082090	132784869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_133303.known	chr7	-	1038	9	FSM	ENSG00000106554.13	ENST00000448878.6	1038	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	480.390726388426	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGATTAAAAGAGAAGGGCA	-133064494	True	NA	-46	True	ATTAAA	-34	NA	133082032	132785392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_132785661_132796441_132796578_132838398_132838470_132885661_132885746_132886973_132886989_132975168_132975287_133024545_133024628_133070141_133070230_133081856
transcript_133305.nnic	chr7	+	908	2	Antisense	novelGene_ENSG00000284135.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	267	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATCCAGTCTTAAAAGTG	NA	False	NA	NA	False	AAGAAA	-4	NA	133034508	133035941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_133035061_133035585
transcript_133307.known	chr7	-	1099	1	FSM	ENSG00000237821.1	ENST00000421179.1	1099	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGTAATGCCCTTCTGATA	NA	False	NA	NA	False	AGTAAA	-23	NA	133170514	133169415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_133169400_133170500
transcript_133308.known	chr7	+	4182	18	FSM	ENSG00000131558.15	ENST00000253861.5	4182	18	0	0	0	0	multi-exon	TRUE	canonical	3	259	junction_10	24.8968807540277	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCATGTTATTTTTCTT	133248416	True	NA	15	True	ATTAAA	-22	NA	133253077	134065761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049_133480139_133630044_133630142_133817324_133817545_133895598_133895736_133917582_133917739_133937890_133938070_133997491_133997634_134004911_134005091_134007675_134007836_134064290
transcript_133310.known	chr7	+	2364	9	FSM	ENSG00000131558.15	ENST00000462055.5	2364	9	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_8	22.1045102863646	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACATTGGTGAGGGCCTGC	133248433	True	NA	NA	False	AAAAAG	-22	NA	133253094	133481078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876_133306062_133317283_133317391_133356329_133356574_133374827_133375003_133475327_133475474_133480049
transcript_133313.nic	chr7	+	674	4	ISM	ENSG00000131558.15	ENST00000462055.5	2364	9	-22	175028	0	139	5prime_fragment	FALSE	canonical	3	297	junction_3	24.0554914035583	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAATCAGGTTAAAGAG	133248411	True	NA	NA	False	NA	NA	NA	133253072	133306050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_133253188_133274981_133275172_133288921_133289117_133305876
transcript_133314.known	chr7	+	568	2	FSM	ENSG00000131558.15	ENST00000481074.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTCAACTCGTTTATTT	133248437	True	NA	25	True	AATAAA	-37	NA	133253098	133254018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_133253188_133253539
transcript_133318.nic	chr7	+	1499	5	ISM	ENSG00000155530.3	ENST00000645682.1	3462	16	41	61136	-18	7422	5prime_fragment	TRUE	canonical	3	3	junction_4	6.04152298679729	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAACTTTTGATTTGATT	NA	False	NA	NA	False	TTTAAA	-29	NA	134127339	134149120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134127665_134137022_134137131_134139435_134139518_134143061_134143163_134148237
transcript_133323.known	chr7	-	6676	10	FSM	ENSG00000205060.11	ENST00000378509.9	6676	10	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_6	17.7458045815599	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTCTTTTTGCCATTATT	-134310369	True	NA	-2	True	AATAAA	-19	NA	134316930	134289331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134295080_134296390_134296467_134299522_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_133333.known	chr7	-	1033	8	FSM	ENSG00000205060.11	ENST00000470969.2	1033	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_4	18.2275861802704	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCATTTTGCTTTGGA	-134310336	True	NA	NA	False	AGTAAA	-14	NA	134316897	134299308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134299599_134300151_134300262_134301760_134301822_134302028_134302111_134304804_134304855_134306671_134306775_134309365_134309480_134316674
transcript_133336.known	chr7	-	1997	3	FSM	ENSG00000273297.3	ENST00000665177.1	1997	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATATATCATATATATAT	-134432435	True	NA	NA	False	AATAAA	-15	NA	134432458	134417240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134418975_134430274_134430393_134432313
transcript_133337.known	chr7	-	1855	2	FSM	ENSG00000273297.3	ENST00000609619.2	1855	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGGAGTCTTCTTCTA	NA	False	NA	NA	False	ATTAAA	-19	NA	134432485	134417291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134418975_134432313
transcript_133340.known	chr7	-	1970	3	FSM	ENSG00000273297.3	ENST00000656398.1	1970	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAAAGAGTCACTGTCTT	-134432420	True	NA	NA	False	AAAAAG	-12	NA	134432443	134415575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134416413_134417971_134418975_134432313
transcript_133350.known	chr7	-	1361	10	FSM	ENSG00000085662.14	ENST00000285930.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_6	125.151562436299	8147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTTTTGTGAGCTTTG	-134448769	True	NA	-7	True	AATAAA	-15	NA	134459100	134442355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134447382_134447979_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_133351.known	chr7	-	1930	9	FSM	ENSG00000085662.14	ENST00000465351.5	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_5	132.214787372669	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTGCCTCAAATAAAAAG	-134448771	True	NA	-38	True	NA	NA	NA	134459102	134442386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134442771_134445237_134445321_134447297_134448062_134448386_134448494_134448996_134449120_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_133352.known	chr7	-	577	5	FSM	ENSG00000085662.14	ENST00000489022.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	630.092602321278	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTGGAGATGATCTTAA	-134448798	True	NA	NA	False	NA	NA	NA	134459129	134449054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_134449136_134449719_134449798_134450785_134450903_134451585_134451754_134458996
transcript_133354.known	chr7	+	2051	4	FSM	ENSG00000172331.12	ENST00000393132.2	2051	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	103.266645147405	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGTGTCTCCGTGTGTTTG	134644362	True	NA	25	True	AATAAA	-37	NA	134646830	134679813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134646938_134658347_134658669_134661446_134662109_134678852
transcript_133355.known	chr7	+	1870	4	FSM	ENSG00000172331.12	ENST00000418040.5	1870	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	102.779159149876	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCAAAGTGTCTCCGTGT	134644342	True	NA	20	True	AATAAA	-32	NA	134646810	134679808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134646938_134647134_134647260_134661446_134662109_134678852
transcript_133357.known	chr7	+	1711	3	FSM	ENSG00000172331.12	ENST00000344924.8	1711	3	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	28.5	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTCCGTGTGTTTGGTG	134644384	True	NA	28	True	AATAAA	-40	NA	134646852	134679816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134646938_134661446_134662109_134678852
transcript_133360.known	chr7	+	2665	15	FSM	ENSG00000122786.20	ENST00000422748.5	2665	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	274.880688403429	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	134779396	True	NA	86	True	NA	NA	NA	134779419	134968859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_133365.known	chr7	+	4114	14	FSM	ENSG00000122786.20	ENST00000361901.6	4114	14	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_3	124.61980049156	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTCACTTATTT	134756594	True	NA	40	True	AATAAA	-21	NA	134779677	134970641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_13337.known	chr1	+	3820	14	FSM	ENSG00000157181.16	ENST00000287859.11	3820	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	41.5777591889173	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTGGAATTTTTAAATA	186374206	True	NA	NA	False	AATAAA	-20	NA	186375837	186421375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_133371.known	chr7	+	2199	13	FSM	ENSG00000122786.20	ENST00000495522.1	2199	13	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_8	305.303526110583	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	134891471	False	NA	86	True	NA	NA	NA	134891609	134968859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958211_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_133372.known	chr7	+	2124	12	FSM	ENSG00000122786.20	ENST00000424922.5	2124	12	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	150.490877239225	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGAAATGTA	134891471	False	NA	86	True	NA	NA	NA	134891609	134968859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134891674_134928753_134928901_134932987_134933391_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_133388.nic	chr7	+	962	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-260	29147	-30	0	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	2	True	AAAAAG	-16	NA	134779389	134933242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_133389.nic	chr7	+	963	5	ISM	ENSG00000122786.20	ENST00000482470.5	3941	11	-179	29065	51	82	5prime_fragment	FALSE	canonical	3	467	junction_3	140.637832747807	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	134779451	False	NA	5	True	AAGAAA	-9	NA	134779470	134933324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987
transcript_13339.known	chr1	+	3754	13	FSM	ENSG00000157181.16	ENST00000367470.8	3754	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	55.2149209906163	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGAATTTTTAAATAAGG	186374206	True	NA	NA	False	AATAAA	-23	NA	186375837	186421378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_133398.nic	chr7	+	722	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-256	35617	-46	0	5prime_fragment	FALSE	canonical	3	295	junction_1	266	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATACGAGATAGAGGAAA	NA	False	NA	2	True	AAAAAG	-16	NA	134891353	134933242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_133399.nic	chr7	+	804	3	ISM	ENSG00000122786.20	ENST00000424922.5	2124	12	-256	35535	-46	82	5prime_fragment	FALSE	canonical	3	295	junction_1	266	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGACAAGGAAAAGGAGGA	NA	False	NA	5	True	AAGAAA	-9	NA	134891353	134933324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134891674_134928753_134928901_134932987
transcript_13340.known	chr1	+	1900	13	FSM	ENSG00000157181.16	ENST00000419367.8	1900	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_10	53.8413306753175	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTAGCTGG	186374206	True	NA	NA	False	NA	NA	NA	186375837	186419551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186375975_186379766_186379885_186383021_186383157_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082_186406269_186417543_186417655_186419008
transcript_133402.known	chr7	+	5011	15	FSM	ENSG00000122786.20	ENST00000361675.7	5011	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	254.574204329905	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTTGAGTCTTGGTT	134756550	True	NA	12	True	AATAAA	-25	NA	134779633	134970729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134779750_134843883_134843972_134867692_134867805_134928753_134928901_134932987_134934078_134935687_134935766_134941091_134941238_134947507_134947770_134950373_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968339
transcript_133403.known	chr7	+	422	3	FSM	ENSG00000122786.20	ENST00000489019.6	422	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	270.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAACAATAAAATAAAATAA	134843844	True	NA	NA	False	AATAAA	-1	NA	134843883	134900053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134843972_134867692_134867805_134899831
transcript_133404.known	chr7	+	903	7	FSM	ENSG00000122786.20	ENST00000466704.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	251.151127588329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACTGTTAAGGTATTACT	134950336	True	NA	102	True	AAAAAG	-4	NA	134950374	134968875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134950515_134958068_134958113_134958208_134958291_134959973_134960112_134960532_134960629_134965305_134965387_134968553
transcript_133406.nnic	chr7	-	748	4	NNC	ENSG00000286458.1	novel	2368	2	NA	NA	-79712	-158855	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTGTTCACTGGAC	-135077723	True	NA	NA	False	AATAAA	-20	NA	135077865	134975397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_134975640_134998082_134998152_134999833_135000040_135077634
transcript_13341.nic	chr1	+	2038	12	ISM	ENSG00000157181.16	ENST00000287859.11	3820	14	-19	14430	-19	-4948	5prime_fragment	FALSE	non_canonical	0	0	junction_11	41.9294961170308	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTAGTTATTCTTTGCA	186374187	True	NA	NA	False	AATAAA	-21	NA	186375818	186406945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_186375975_186379766_186379885_186383021_186383157_186385987_186386084_186388441_186388549_186389587_186389625_186390710_186390852_186391695_186391792_186393946_186394016_186398312_186398442_186398953_186399045_186406082
transcript_133414.nnic	chr7	-	401	3	NNC	ENSG00000286458.1	novel	2368	2	NA	NA	-79638	-138917	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTATGGTATTTTGT	-135077649	True	NA	NA	False	AATACA	-19	NA	135077791	134955459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_134955635_134998082_134998152_135077634
transcript_133420.known	chr7	+	856	5	FSM	ENSG00000146856.14	ENST00000494702.2	856	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.95474734428616	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTTCTATTGAAATTCT	134985947	True	NA	-36	True	NA	NA	NA	134986554	134995550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134986702_134987874_134987997_134989249_134989311_134993492_134993679_134995210
transcript_133422.known	chr7	+	2979	5	FSM	ENSG00000146856.14	ENST00000476700.5	2979	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	10.5208127062504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTTTGGCCCTGTG	134985940	True	NA	9	True	AATAAA	-14	NA	134986547	135012511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_134986702_134987888_134987997_134989249_134989311_134993492_134993679_135010041
transcript_133426.nnic	chr7	+	905	4	NIC	ENSG00000146856.14	novel	2979	5	NA	NA	-12	-1940	combination_of_known_splicesites	TRUE	canonical	1	1	junction_3	12.5521135891752	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGGTTGTATTATGG	134985888	True	NA	NA	False	AATAAA	-19	NA	134986495	135010571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_134986702_134987888_134987997_134989249_134989311_135010041
transcript_133428.nic	chr7	+	752	3	ISM	ENSG00000146856.14	ENST00000476700.5	2979	5	-52	22824	-12	1323	5prime_fragment	FALSE	canonical	3	26	junction_1	1.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTGGACATCTTGA	134985888	True	NA	4	True	AATAAA	-21	NA	134986495	134989687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_134986702_134987888_134987997_134989249
transcript_133430.nnic	chr7	+	844	3	NIC	ENSG00000146856.14	novel	2979	5	NA	NA	-12	-1940	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	11.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGATGGTTGTATTATGG	134985888	True	NA	NA	False	AATAAA	-19	NA	134986495	135010571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_134986702_134987888_134987997_135010041
transcript_133434.known	chr7	-	1727	4	FSM	ENSG00000122783.17	ENST00000617987.1	1727	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	102.878569196893	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGTGCTAATGTCTTTC	-135170489	False	NA	0	True	AATACA	-37	NA	135170524	135165781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170275
transcript_133441.known	chr7	-	1579	4	FSM	ENSG00000122783.17	ENST00000430372.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100.180947401301	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAATACACAAGTGCTA	-135170760	False	NA	-47	True	AATAAA	-17	NA	135170795	135165828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168744_135169061_135170651
transcript_133442.known	chr7	-	1738	4	FSM	ENSG00000122783.17	ENST00000424142.5	1738	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.5870749049728	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135170626	False	NA	-3	True	AATACA	-34	NA	135170661	135165784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168748_135169061_135170398
transcript_133443.known	chr7	-	1494	4	FSM	ENSG00000122783.17	ENST00000393114.8	1494	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	67.4405087630737	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAAGTTGTGCTAATGTCT	-135166020	True	NA	-3	True	AATACA	-34	NA	135170707	135165784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135166872_135167731_135167808_135168785_135169061_135170651
transcript_133444.known	chr7	+	1053	2	FSM	ENSG00000287733.1	ENST00000670978.1	1053	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTACCTGTTCTTTGTCTT	135170779	True	NA	10	True	TATAAA	-22	NA	135170815	135172414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135171154_135171699
transcript_133446.known	chr7	-	4580	15	FSM	ENSG00000105875.15	ENST00000354475.5	4580	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	6.72074157715789	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTATCTCTCCTTCCATA	-135210791	True	NA	-5	True	AATAAA	-16	NA	135211526	135183838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135186316_135186971_135187170_135188432_135188546_135189343_135189453_135193230_135193400_135193577_135193673_135194933_135195085_135196143_135196338_135197992_135198152_135204267_135204434_135205927_135206059_135207119_135207203_135208790_135208999_135209575_135209756_135211379
transcript_133449.known	chr7	-	3507	12	FSM	ENSG00000080802.20	ENST00000451834.5	3507	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	30.9173785680588	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGGTTGTCCTTGTTTTT	-135505586	True	NA	1	True	AATAAA	-22	NA	135510080	135361794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135363187_135363853_135364067_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_133450.known	chr7	-	3297	11	FSM	ENSG00000080802.20	ENST00000423368.6	3297	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.8275798681535	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACTTGGGTTGTCCTTGTT	-135505583	True	NA	-2	True	AATAAA	-19	NA	135510077	135361797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_133451.known	chr7	-	2215	11	FSM	ENSG00000080802.20	ENST00000361528.8	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	24.943135328182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAGAGGAGCAACCATTA	-135505597	True	NA	NA	False	NA	NA	NA	135510091	135362884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135363187_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_133452.known	chr7	-	3783	11	FSM	ENSG00000080802.20	ENST00000315544.6	3783	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	32.6563929422709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCTGTGGAGCTGAGGC	-135505633	True	NA	NA	False	NA	NA	NA	135510127	135387069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410514_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_133453.known	chr7	-	4642	11	FSM	ENSG00000080802.20	ENST00000428680.6	4642	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	24.6919015063644	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGCCTTGAAATGTTTT	-135505582	True	NA	NA	False	AAAAAG	-3	NA	135510076	135386150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135388895_135393917_135394416_135395633_135395884_135398168_135398227_135410523_135410649_135413487_135413614_135414330_135414433_135415175_135415263_135422155_135422354_135438157_135438424_135509888
transcript_133459.nic	chr7	-	564	3	ISM	ENSG00000080802.20	ENST00000315544.6	3783	11	19	35206	-6	0	5prime_fragment	FALSE	canonical	3	78	junction_2	24.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAAATGAGAGAAAACA	-135505614	True	NA	-29	True	GATAAA	-17	NA	135510108	135422275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_135422354_135438157_135438424_135509888
transcript_133460.known	chr7	+	6264	43	FSM	ENSG00000155561.15	ENST00000285968.11	6264	43	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	85.8674194256521	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGTATGGTTAATCTTT	135546248	True	NA	NA	False	AATAAA	-21	NA	135557916	135648753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968_135577129_135577795_135578025_135578750_135578916_135584831_135585008_135587574_135587692_135587854_135587993_135591449_135591601_135592986_135593193_135594546_135594730_135597367_135597419_135597997_135598208_135600869_135600970_135601369_135601508_135602804_135602995_135604339_135604461_135606144_135606227_135606750_135606916_135607246_135607372_135614158_135614274_135615915_135616066_135616654_135616727_135617089_135617248_135617601_135617683_135618411_135618604_135619422_135619691_135619789_135619889_135622776_135622926_135625163_135625356_135626239_135626362_135627972_135628112_135630343_135630471_135635580_135635658_135637930_135638060_135638556_135638684_135643191_135643359_135644894_135645019_135645467_135645597_135646157_135646232_135648403
transcript_133463.nic	chr7	+	1143	5	ISM	ENSG00000155561.15	ENST00000285968.11	6264	43	-222	71380	-222	3596	5prime_fragment	FALSE	canonical	3	352	junction_1	54.4948392051945	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAACGTTTATTATTTC	NA	False	NA	NA	False	AATAAA	-22	NA	135557694	135577373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_135557973_135571104_135571248_135573653_135573826_135576269_135576415_135576968
transcript_133466.nic	chr7	+	373	2	ISM	ENSG00000155561.15	ENST00000285968.11	6264	43	6	77326	6	-2350	5prime_fragment	FALSE	canonical	3	352	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGGTCTAACTTTGTAGC	135546254	True	NA	NA	False	AAAAAG	-1	NA	135557922	135571427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_135557973_135571104
transcript_133467.known	chr7	-	2897	16	FSM	ENSG00000164707.16	ENST00000354042.8	2897	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	1.6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAAAGTTGTATCTAGTCT	-135728101	True	NA	NA	False	AATAAA	-33	NA	135728186	135681236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135681701_135684123_135684262_135685521_135685684_135691200_135691326_135691547_135691646_135692322_135692425_135694136_135694239_135695367_135695488_135699363_135699549_135701679_135701761_135702844_135702882_135705595_135705651_135706127_135706301_135708113_135708251_135721394_135721524_135727397
transcript_133469.known	chr7	+	2004	3	FSM	ENSG00000243317.8	ENST00000422968.2	2004	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATGGAAAGAAGTGTTAAC	135655004	False	NA	NA	False	AATACA	-21	NA	135662563	135693418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135662595_135688903_135689029_135691570
transcript_13347.known	chr1	+	2879	18	FSM	ENSG00000116711.10	ENST00000367466.4	2879	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.59642267473712	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGAGATAACTGAGTTTT	186828849	True	NA	NA	False	AATAAA	-20	NA	186828948	186988981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_186829036_186854285_186854388_186870434_186870517_186893010_186893160_186894097_186894212_186906964_186907003_186911247_186911390_186932762_186932900_186939007_186939231_186939979_186940095_186946636_186946775_186946868_186946962_186950656_186950729_186956101_186956345_186965408_186965594_186977592_186977789_186979314_186979473_186988376
transcript_133472.known	chr7	+	2461	3	FSM	ENSG00000243317.8	ENST00000507606.3	2461	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_1	85	1692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGCTTTTTGGCTAGT	135654954	True	NA	9	True	AATAAA	-20	NA	135662513	135676416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_135662595_135672752_135672807_135674090
transcript_133476.known	chr7	-	3782	4	FSM	ENSG00000105887.11	ENST00000393085.4	3782	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	8.83176086632785	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAATGTGTCAGCAGCATT	-135971346	True	NA	-7	True	AATAAA	-17	NA	135977359	135926759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_135930013_135950598_135950683_135951516_135951631_135977028
transcript_13348.known	chr1	+	2393	3	FSM	ENSG00000230426.5	ENST00000429725.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTCTAGAAATCATTTCA	187641035	True	NA	NA	False	AATAAA	-23	NA	187641225	187643860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_187641270_187641375_187641482_187641617
transcript_133481.known	chr7	-	1482	5	FSM	ENSG00000105894.12	ENST00000348225.7	1482	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.1026313764871	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTGTGTTCAATAA	-137343620	True	NA	NA	False	AATAAA	-24	NA	137343733	137227340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137228076_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_133482.known	chr7	-	1599	6	FSM	ENSG00000105894.12	ENST00000393083.2	1599	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	97.6577697881741	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAGGTGATGCTGAAAAAA	-137343706	False	NA	NA	False	AATAAA	-1	NA	137343774	137227363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137228076_137236143_137236243_137251229_137251392_137253463_137253638_137254858_137254975_137343438
transcript_133483.known	chr7	+	75	1	FSM	ENSG00000279483.2	ENST00000623936.2	75	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	716	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCGCTAGCTTGTTGCA	137433202	False	NA	61	True	AAGAAA	-20	NA	137513858	137513933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_137513900_137513900
transcript_133484.known	chr7	+	862	1	FSM	ENSG00000230383.1	ENST00000456481.1	862	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	887	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTAAATGTCTTAAGAAC	137721903	False	NA	NA	False	NA	NA	NA	137721984	137722846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_137722000_137722800
transcript_133487.known	chr7	-	1105	4	FSM	ENSG00000182158.16	ENST00000452463.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	7.25718035235908	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTTTCCCATATATG	-137997730	True	NA	2	True	AATAAA	-35	NA	138002047	137912810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137913079_137915836_137916013_137928149_137928367_138001603
transcript_133488.nnic	chr7	-	914	3	NIC	ENSG00000182158.16	novel	7441	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	44	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAAGCTAACTATTAT	-137997769	True	NA	-11	True	AATAAA	-22	NA	138002086	137912823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_137913079_137915836_137916013_138001603
transcript_133489.known	chr7	-	2360	10	FSM	ENSG00000182158.16	ENST00000456390.5	2360	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	10.130018951148	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-137997750	True	NA	NA	False	NA	NA	NA	138002067	137884266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_137885122_137885402_137885503_137901353_137901423_137903958_137904018_137905701_137905849_137908251_137908437_137912990_137913079_137915836_137916013_137928149_137928367_138001603
transcript_133490.known	chr7	+	8488	19	FSM	ENSG00000122779.18	ENST00000343526.9	8488	19	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_9	94.5673709813326	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTGGTATGGAATAAAGG	138442558	True	NA	8	True	AATAAA	-21	NA	138460258	138589996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_138460913_138504289_138504409_138515211_138515360_138519188_138519322_138525240_138525358_138529115_138529231_138538656_138538804_138551062_138551181_138554697_138554967_138567480_138567655_138570829_138571004_138573506_138573643_138576372_138576446_138577419_138577589_138579203_138579533_138580561_138580695_138581696_138581772_138583849_138584000_138584741
transcript_133493.nnic	chr7	-	1583	13	NNC	ENSG00000157703.16	novel	1804	15	NA	NA	-613	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_11	7.38382240667619	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	-138664826	False	NA	-1	True	AATAAA	-19	NA	138664837	138594284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138659863_138659989_138663073_138663146_138664785
transcript_133498.known	chr7	-	665	4	FSM	ENSG00000157703.16	ENST00000478865.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.79271573232759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTGATATTCTCCCAT	-138626056	True	NA	-3	True	AATAAA	-17	NA	138626094	138594286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968
transcript_133500.known	chr7	-	1413	11	FSM	ENSG00000157703.16	ENST00000288513.9	1413	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	6.81248853210044	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGATATTCTCCCATGA	-138663141	False	NA	-1	True	AATAAA	-19	NA	138663152	138594284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_138594622_138596416_138596531_138621045_138621136_138625968_138626051_138627349_138627462_138628157_138628364_138630048_138630123_138644716_138644846_138649011_138649138_138656447_138656512_138663073
transcript_133501.known	chr7	+	4125	3	FSM	ENSG00000214128.11	ENST00000442682.7	4125	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTGGCATAATTATCTGA	138797983	True	NA	NA	False	AATAAA	-15	NA	138797993	138806759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_138798187_138801326_138801399_138802899
transcript_133502.known	chr7	+	1153	3	FSM	ENSG00000214128.11	ENST00000397602.7	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGGCGGCAGAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	138797951	138803748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_138798187_138801329_138801399_138802899
transcript_133503.nnic	chr7	+	490	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTCTACTTTCCT	NA	False	NA	10	True	AATAAA	-18	NA	139035148	139036950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_139035341_139036652
transcript_133505.nnic	chr7	+	500	2	Antisense	novelGene_ENSG00000146858.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	60	junction_1	0	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGCTTCTACTTTCCT	139035773	False	NA	10	True	AATAAA	-18	NA	139035783	139036950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_+_139035986_139036652
transcript_133507.known	chr7	-	7177	13	FSM	ENSG00000105939.14	ENST00000242351.10	7177	13	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	29.1617853058111	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTACTGCCTTTATTTGAT	-139107416	True	NA	-4	True	AATAAA	-19	NA	139109720	139043514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139047854_139053450_139053582_139053964_139054096_139055204_139055296_139061035_139061139_139064878_139065000_139073855_139074031_139076285_139076410_139078551_139078654_139079469_139080244_139083779_139084033_139089623_139089760_139109023
transcript_13351.nic	chr1	+	1124	3	NIC	ENSG00000230426.5	novel	1142	4	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTGCTATATATATT	187640982	True	NA	NA	False	AATAAA	-15	NA	187641172	187686621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_187641270_187641375_187641482_187685700
transcript_133510.known	chr7	+	4299	18	FSM	ENSG00000105948.13	ENST00000464848.5	4299	18	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	14.4586272901056	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGATATTCTGTTGAGTG	139132752	True	NA	9	True	ATTAAA	-20	NA	139133777	139191986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_133513.nnic	chr7	+	2077	17	NIC	ENSG00000105948.13	novel	4299	18	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	19.1122302139232	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAGCATCATTGTATCAT	139132713	True	NA	5	True	NA	NA	NA	139133738	139189800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_133518.known	chr7	+	1599	15	FSM	ENSG00000105948.13	ENST00000495038.5	1599	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	20.8889190427727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCTTTCTTCCAAAAATG	139132738	True	NA	NA	False	NA	NA	NA	139133763	139189665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_133519.known	chr7	+	1267	11	FSM	ENSG00000105948.13	ENST00000481482.5	1267	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_8	15.7546818438203	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAACTTGTAACC	139132754	True	NA	NA	False	NA	NA	NA	139133779	139168581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343
transcript_133522.known	chr7	+	1193	8	FSM	ENSG00000105948.13	ENST00000474035.6	1193	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	13.4998110342028	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATGGCTGAGATTTGGA	139132752	True	NA	NA	False	AATAAA	-24	NA	139133777	139161343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947
transcript_133524.known	chr7	+	553	7	FSM	ENSG00000105948.13	ENST00000468866.1	553	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.4663544089041	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTGGATTACTATGATGT	139132796	True	NA	NA	False	NA	NA	NA	139133821	139148248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134722_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205
transcript_133525.nic	chr7	+	1023	7	ISM	ENSG00000105948.13	ENST00000474035.6	1193	8	-39	12779	-5	316	5prime_fragment	FALSE	canonical	3	62	junction_5	8.67947771086102	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTGTGTTATGTCCATT	139132713	True	NA	NA	False	AAAAAG	-17	NA	139133738	139148564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205
transcript_133528.known	chr7	+	4198	17	FSM	ENSG00000105948.13	ENST00000430935.5	4198	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	20.778500757995	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGATATTCTGTTGAGT	139132718	True	NA	8	True	ATTAAA	-19	NA	139133743	139191985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139147144_139147291_139148205_139148378_139160947_139161023_139165131_139165235_139166839_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139189320
transcript_133529.known	chr7	+	1794	16	FSM	ENSG00000105948.13	ENST00000478836.6	1794	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	24.8608572302369	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCATCATTGTATCATTT	139132752	True	NA	7	True	NA	NA	NA	139133777	139189802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139133861_139134654_139134793_139137846_139137940_139139889_139140005_139142255_139142306_139160947_139161023_139165131_139165235_139166842_139166896_139168343_139168398_139169288_139169353_139178213_139178303_139178514_139178599_139179573_139179644_139181091_139181199_139187405_139187540_139189320
transcript_13353.known	chr1	+	1157	2	FSM	ENSG00000230426.5	ENST00000662036.1	1157	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTGCTATATATATT	187641055	True	NA	NA	False	AATAAA	-15	NA	187641245	187686621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_187641482_187685700
transcript_133532.known	chr7	-	275	2	FSM	ENSG00000228360.1	ENST00000451614.1	275	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCCTCTACTCTTTGAG	-139227816	False	NA	-91	True	NA	NA	NA	139227828	139227536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139227618_139227634
transcript_133533.known	chr7	+	14692	18	FSM	ENSG00000157741.15	ENST00000473989.8	14692	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_17	9.34276175613153	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCGTGTCTGTTGTGTTA	139227086	True	NA	18	True	AATAAA	-18	NA	139231236	139308236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139231953_139237004_139237098_139251955_139252058_139258487_139258626_139259266_139259371_139261251_139261742_139266332_139266404_139269393_139269524_139272321_139272441_139273296_139273411_139273930_139274075_139276096_139276148_139279317_139279361_139282004_139282056_139283023_139284575_139293231_139293464_139293888_139293982_139297786
transcript_133537.known	chr7	+	2411	11	FSM	ENSG00000146963.18	ENST00000456182.5	2411	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	317.14482496172	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCACCATTATTAAACTG	139347419	True	NA	-28	True	AATAAA	-17	NA	139359911	139423151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139360323_139374400_139374472_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_13355.nnic	chr1	+	457	2	NNC	ENSG00000230426.5	novel	1157	2	NA	NA	0	-18133	intron_retention	FALSE	canonical	2	10	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCAAAAGTCTTAGTG	187641055	True	NA	NA	False	AAGAAA	-37	NA	187641245	187667997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_187641482_187667776
transcript_133552.nnic	chr7	+	527	2	NIC	ENSG00000164898.13	novel	460	2	NA	NA	-164	0	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTTCTCTGTAATTTTG	NA	False	NA	10	True	ATTAAA	-17	NA	139340285	139345795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_139340518_139345500
transcript_133553.known	chr7	+	386	2	FSM	ENSG00000164898.13	ENST00000482181.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTAAGTTTAAGG	139340294	True	NA	-8	True	NA	NA	NA	139340490	139345777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139340600_139345500
transcript_133554.known	chr7	+	1014	2	FSM	ENSG00000164898.13	ENST00000297534.7	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	0	2324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCCTTGTCCCCA	139338731	True	NA	NA	False	AATAAA	-20	NA	139341336	139346328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139341523_139345500
transcript_133555.known	chr7	-	535	1	FSM	ENSG00000273391.1	ENST00000608266.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTTTCCCTGGTGTTTC	-139359420	False	NA	-21	True	AATAAA	-13	NA	139359566	139359031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139359000_139359600
transcript_133556.known	chr7	+	460	2	FSM	ENSG00000164898.13	ENST00000481123.1	460	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGGTTTTTCTCTGTAA	139340431	True	NA	5	True	ATTAAA	-12	NA	139340449	139345790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139340620_139345500
transcript_133557.known	chr7	+	2661	10	FSM	ENSG00000146963.18	ENST00000354926.9	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	683	junction_1	63.8783566197851	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATGAGACTTAAGTTTC	139347401	True	NA	29	True	AATAAA	-19	NA	139359893	139423454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139360323_139376061_139376157_139398598_139398698_139402136_139402248_139405643_139405788_139407173_139407351_139409562_139409655_139412550_139412581_139417537_139417730_139422162
transcript_133558.known	chr7	-	2158	5	FSM	ENSG00000188883.5	ENST00000340940.5	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	4.65698400254929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTCCAGCTAGACCTCCA	-139482541	True	NA	NA	False	NA	NA	NA	139483673	139452689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_139453708_139454110_139454215_139479626_139479773_139480145_139480248_139482885
transcript_133560.known	chr7	+	1531	5	FSM	ENSG00000236279.7	ENST00000422142.7	1531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCAGAGAAGTCTGCCGC	139523671	True	NA	NA	False	AATAAA	-15	NA	139523684	139544985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139524118_139536273_139536349_139540320_139540488_139542020_139542122_139544230
transcript_133562.known	chr7	+	728	5	FSM	ENSG00000059377.18	ENST00000481440.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.8613807855649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAGCATTGCAAAGTC	139778055	True	NA	NA	False	ATTAAA	-16	NA	139778255	139797483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139778472_139780739_139780825_139782665_139782730_139787337_139787427_139797209
transcript_133568.known	chr7	+	582	3	FSM	ENSG00000059377.18	ENST00000474763.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAGCATTGCAAAGTCT	139778053	True	NA	NA	False	ATTAAA	-17	NA	139778253	139797484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_139778472_139787337_139787427_139797209
transcript_133570.known	chr7	+	2457	1	FSM	ENSG00000260231.2	ENST00000566699.2	2457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTCTCAGATATTTTTC	140177056	True	NA	NA	False	ATTAAA	-21	NA	140177183	140179640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140177200_140179600
transcript_133574.nnic	chr7	+	765	2	Intergenic	novelGene_64	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGAACTTTAGAATATG	140231464	True	NA	NA	False	AATACA	-18	NA	140231497	140254196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr7_+_140231622_140253555
transcript_133576.known	chr7	-	3330	15	FSM	ENSG00000157800.18	ENST00000326232.14	3330	15	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_7	59.0634387410551	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392400	True	NA	NA	False	AATAAA	-18	NA	140398530	140333751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_133580.known	chr7	-	2111	14	FSM	ENSG00000157800.18	ENST00000460560.5	2111	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	151.163260618931	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGATCTTGGATTGTC	-140392378	True	NA	NA	False	GGGGCT	-37	NA	140398508	140335320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140335505_140337283_140337350_140343411_140343564_140345215_140345264_140345868_140345971_140348625_140348768_140351272_140351970_140352061_140352147_140355667_140355765_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_133588.known	chr7	-	2955	12	FSM	ENSG00000157800.18	ENST00000340308.7	2955	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	123.076674348128	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCATTTCGTTACTTAAA	-140392327	True	NA	NA	False	AATAAA	-18	NA	140398457	140333751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_140335505_140337283_140337350_140348625_140348768_140351272_140351452_140352061_140352147_140355667_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_133601.nic	chr7	-	1739	7	ISM	ENSG00000157800.18	ENST00000326232.14	3330	15	-12	20992	8	-2682	5prime_fragment	FALSE	canonical	3	419	junction_2	33.4912924006624	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACACCAAAAAGCAAAGAC	-140392412	True	NA	NA	False	NA	NA	NA	140398542	140354743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_140355765_140358639_140358786_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_133603.nnic	chr7	-	975	6	NNC	ENSG00000157800.18	novel	551	6	NA	NA	8	-1294	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	197.188640646463	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTACAGACTTTTTTG	-140392412	True	NA	NA	False	AATAAA	-16	NA	140398542	140359933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_140360337_140364407_140364492_140369589_140369683_140380281_140380391_140382437_140382597_140398415
transcript_133607.nnic	chr7	-	517	4	NNC	ENSG00000157800.18	novel	550	2	NA	NA	8	3726	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	227.428132726705	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGATTGTGATTTTTGT	-140392412	True	NA	-3	True	AATAAA	-16	NA	140398542	140375532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_140375655_140380281_140380391_140382437_140382597_140398415
transcript_133609.nnic	chr7	-	750	4	NNC	ENSG00000157800.18	novel	550	2	NA	NA	8	-275	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	233.079862326676	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTAATGTCTTGGTATT	-140392412	True	NA	NA	False	ACTAAA	-21	NA	140398542	140379533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_140379889_140380281_140380391_140382437_140382597_140398415
transcript_133611.known	chr7	+	2661	4	FSM	ENSG00000146955.11	ENST00000537763.6	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.18544972870135	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGTGTTGTACTGCCCCT	140404038	True	NA	16	True	ATTAAA	-29	NA	140404057	140427974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140404218_140407623_140407848_140411873_140412058_140425881
transcript_133622.known	chr7	+	2574	8	FSM	ENSG00000133597.11	ENST00000072869.9	2574	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	4.89064079103534	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTCATTTCTTGAC	140672503	True	NA	16	True	AATAAA	-16	NA	140672944	140695110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140674264_140674610_140674758_140679154_140679284_140681041_140681138_140686989_140687242_140689596_140689726_140690759_140690814_140694662
transcript_133634.known	chr7	+	503	5	FSM	ENSG00000090266.13	ENST00000472695.5	503	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1856.13541733894	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140695962	True	NA	23	True	ATTAAA	-33	NA	140696991	140706643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140697075_140700869_140700960_140702865_140703011_140704859_140704964_140706562
transcript_133647.known	chr7	+	420	4	FSM	ENSG00000090266.13	ENST00000460088.5	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1753.45075652428	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTTGTGGATCTTTTTT	140695958	True	NA	26	True	ATTAAA	-36	NA	140696987	140706646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140697075_140702865_140703011_140704859_140704964_140706562
transcript_133650.known	chr7	+	499	4	FSM	ENSG00000090266.13	ENST00000471136.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1765.2944985658	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGAGTTGTGGATCTTTT	140697205	False	NA	24	True	ATTAAA	-34	NA	140697223	140706644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140697392_140702865_140703011_140704859_140704964_140706562
transcript_133655.known	chr7	+	559	2	FSM	ENSG00000090266.13	ENST00000461457.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTCTGGAAACTGATAAA	140671714	True	NA	NA	False	AAGAAA	-45	NA	140696687	140721955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140721551
transcript_133656.known	chr7	+	465	4	FSM	ENSG00000090266.13	ENST00000247866.9	465	4	0	0	0	0	multi-exon	FALSE	canonical	3	3075	junction_3	466.612139671579	27405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGAGTTGTGGATCTTT	140671734	True	NA	23	True	ATTAAA	-33	NA	140696707	140706643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706562
transcript_133657.known	chr7	+	726	4	FSM	ENSG00000090266.13	ENST00000464566.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	1761.85981281145	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGATTTGAATTAGTGA	140671774	False	NA	NA	False	AATAAA	-25	NA	140696747	140706500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_140696843_140702865_140703011_140704859_140704964_140706118
transcript_13366.known	chr1	+	472	2	FSM	ENSG00000237457.6	ENST00000436905.5	472	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAACAAGAATATTAATT	190478421	False	NA	33	True	AATAAA	-37	NA	190478550	190480735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_190478632_190480344
transcript_133666.known	chr7	-	622	3	FSM	ENSG00000090263.16	ENST00000467334.1	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	487	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGATGATTTGTTTGG	-141006244	True	NA	-10	True	AATAAA	-12	NA	141014966	141006168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010618_141014910
transcript_133668.known	chr7	-	688	3	FSM	ENSG00000090263.16	ENST00000496958.5	688	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	574	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-141014417	False	NA	-9	True	AATAAA	-13	NA	141014429	141006167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010661_141014351
transcript_133669.known	chr7	-	853	3	FSM	ENSG00000090263.16	ENST00000393008.7	853	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	546	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAAACTTCTTTCATC	-141014667	False	NA	NA	False	NA	NA	NA	141014679	141006053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010661_141014550
transcript_13367.known	chr1	+	526	2	FSM	ENSG00000237457.6	ENST00000424735.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATAACAAGAATATTAATT	190478985	False	NA	33	True	AATAAA	-37	NA	190479005	190480735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_190479141_190480344
transcript_133670.known	chr7	-	4210	3	FSM	ENSG00000090263.16	ENST00000324787.10	4210	3	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_2	281.5	6979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCTTCACCCCGTCTC	-141006230	True	NA	NA	False	AATAAA	-17	NA	141014952	141002609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141010418_141010661_141014910
transcript_133672.known	chr7	-	466	2	FSM	ENSG00000090263.16	ENST00000484502.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGATGATTTGTTTGGG	-141014636	False	8722	-9	True	AATAAA	-13	NA	141014648	141006167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141006536_141014550
transcript_133674.known	chr7	-	535	2	FSM	ENSG00000090263.16	ENST00000485202.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCTTGTTGGAAGATA	-141014640	False	8722	NA	False	AAAAAG	-5	NA	141014652	141010227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141010661_141014550
transcript_133676.known	chr7	-	541	2	FSM	ENSG00000090263.16	ENST00000496641.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	3	589	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGAGGTGTTTAATCAT	-141006227	True	NA	NA	False	AATAGA	-10	NA	141014949	141010158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141010661_141014910
transcript_133678.known	chr7	+	3628	16	FSM	ENSG00000006530.18	ENST00000649286.2	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_9	36.3688511412353	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTTTTCTTGATTCAGG	141549278	True	NA	4	True	TATAAA	-17	NA	141551409	141655244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141651524_141651610_141652786
transcript_133683.nic	chr7	+	1252	15	NIC	ENSG00000006530.18	novel	1201	14	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_14	73.9010991053556	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATTAGCTTTTACTGT	141549238	True	NA	NA	False	AATAAA	-20	NA	141551369	141650599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141650472
transcript_133690.nic	chr7	+	1562	4	ISM	ENSG00000006530.18	ENST00000495028.5	567	5	-40	1405	-25	563	5prime_fragment	FALSE	canonical	3	217	junction_1	45.6143252352445	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	141549238	True	NA	NA	False	AATAGA	-29	NA	141551369	141597903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_141551435_141555452_141555568_141593145_141593186_141596561
transcript_133692.known	chr7	+	1046	3	FSM	ENSG00000006530.18	ENST00000492693.5	1046	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	153	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGATCCCCGTCCCAAGCC	141555438	True	NA	NA	False	AATAAA	-19	NA	141555452	141594195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141555568_141593145_141593186_141593304
transcript_133693.known	chr7	+	1201	14	FSM	ENSG00000006530.18	ENST00000650006.1	1201	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	76.1914437103968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATTAGCTTTTACTGT	141553307	False	NA	NA	False	AATAAA	-20	NA	141555438	141650599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141555568_141593145_141593186_141596561_141596642_141601204_141601281_141611194_141611288_141614145_141614179_141615470_141615566_141621731_141621802_141633900_141633981_141636959_141637018_141641247_141641399_141641810_141641909_141649262_141649334_141650472
transcript_133694.known	chr7	-	1150	2	FSM	ENSG00000261570.2	ENST00000663125.1	1150	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTGACAATGGGCTCGTA	-141511781	False	NA	NA	False	NA	NA	NA	141511823	141500248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141501301_141511725
transcript_133695.known	chr7	-	925	1	FSM	ENSG00000270157.1	ENST00000602609.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGATTATCTGGTGAG	-141663832	False	NA	NA	False	ATTAAA	-27	NA	141663846	141662921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_141662900_141663800
transcript_13370.known	chr1	+	522	1	FSM	ENSG00000231767.4	ENST00000647225.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3096	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTATGACTTAATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	192716131	192716653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_192716100_192716700
transcript_133701.known	chr7	+	989	7	FSM	ENSG00000106028.11	ENST00000481508.1	989	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1447.11384217767	6119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	141738588	False	NA	16	True	ATTAAA	-19	NA	141738606	141750461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738999_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_133707.known	chr7	+	676	7	FSM	ENSG00000106028.11	ENST00000484178.5	676	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1447.11384217767	6101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTAATAATCTTTTTTCT	141738581	False	NA	16	True	ATTAAA	-19	NA	141738599	141750461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738679_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_13371.known	chr1	+	1348	5	FSM	ENSG00000116741.8	ENST00000235382.7	1348	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	5.11737237261468	389	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTGGAGTCTAGATGTGA	192807953	True	NA	14	True	AATAAA	-25	NA	192809038	192812275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_192809182_192810165_192810268_192810369_192810432_192810980_192811148_192811401
transcript_133711.known	chr7	+	677	7	FSM	ENSG00000106028.11	ENST00000265304.11	677	7	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_1	723.73544890381	36309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTCGCTCTCCTTTTTGT	141680488	True	NA	43	True	NA	NA	NA	141738357	141750488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738411_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_133712.known	chr7	+	636	7	FSM	ENSG00000106028.11	ENST00000498107.5	636	7	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_1	1050.67038123286	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGATGATTCTTCTTTGG	141680488	True	NA	21	True	NA	NA	NA	141738357	141750354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738504_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_133713.known	chr7	+	630	7	FSM	ENSG00000106028.11	ENST00000467681.5	630	7	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	1305.25931863706	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATATTTCTGAGTGACC	141680526	True	NA	-19	True	NA	NA	NA	141738395	141750314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_141738576_141739123_141739191_141742168_141742230_141743560_141743702_141743901_141743990_141745495_141745585_141750310
transcript_133714.known	chr7	+	809	5	FSM	ENSG00000204983.15	ENST00000311737.12	809	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTGTGCCTGCT	NA	False	NA	NA	False	AATAAA	-17	NA	142749471	142753072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142749525_142750554_142750715_142751773_142752028_142752430_142752568_142752867
transcript_133718.nnic	chr7	+	1052	5	Fusion	ENSG00000211772.11_ENSG00000211764.1	novel	758	4	NA	NA	-244	0	multi-exon	FALSE	canonical	3	76	junction_1	20.3224014329016	214	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	NA	False	NA	18	True	AATAAA	-29	NA	142796120	142802748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796415_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_133720.nnic	chr7	+	964	5	Fusion	ENSG00000211772.11_ENSG00000211764.1_ENSG00000211765.1	novel	758	4	NA	NA	40	0	multi-exon	FALSE	canonical	3	8	junction_1	49.6990945591567	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796384	False	NA	18	True	AATAAA	-29	NA	142796404	142802748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796611_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_133721.nnic	chr7	+	830	5	Fusion	ENSG00000211772.11_ENSG00000211765.1	novel	758	4	NA	NA	32	0	multi-exon	FALSE	canonical	3	6	junction_1	50.564315480386	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796571	False	NA	18	True	AATAAA	-29	NA	142796591	142802748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796664_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_133722.nnic	chr7	+	1013	5	Fusion	ENSG00000211766.1_ENSG00000211772.11_ENSG00000211767.1	novel	758	4	NA	NA	-56	0	multi-exon	FALSE	canonical	3	12	junction_1	47.9687398208458	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796617	False	NA	18	True	AATAAA	-29	NA	142796640	142802748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142796896_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_133723.nnic	chr7	+	1116	5	Fusion	ENSG00000211766.1_ENSG00000211772.11_ENSG00000211768.1_ENSG00000211767.1	novel	758	4	NA	NA	-7	0	multi-exon	FALSE	canonical	3	17	junction_1	45.8059766842712	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142796666	False	NA	18	True	AATAAA	-29	NA	142796689	142802748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr7_+_142797048_142801040_142801428_142801943_142801962_142802104_142802212_142802502
transcript_133739.known	chr7	+	758	4	FSM	ENSG00000211772.11	ENST00000466254.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	2.49443825784929	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGTGTCTGTGGAGTTC	142801030	False	NA	18	True	AATAAA	-29	NA	142801040	142802748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142801428_142801943_142801962_142802104_142802212_142802502
transcript_133740.known	chr7	-	447	2	FSM	ENSG00000237254.2	ENST00000417977.2	447	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACACTGAGCTGGGTGGGGC	NA	False	NA	NA	False	NA	NA	NA	142813399	142812585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_142812878_142813244
transcript_133741.known	chr7	+	3999	20	FSM	ENSG00000106123.12	ENST00000652003.1	3999	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	14.9573724861605	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGGTGTGGTGAGGCCT	142855050	False	NA	11	True	ATTAAA	-21	NA	142855075	142871093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863126_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_133746.known	chr7	+	4011	20	FSM	ENSG00000106123.12	ENST00000619012.4	4011	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	22.95509285733	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGTGTGGTGAGGCCTC	142855035	False	NA	12	True	ATTAAA	-22	NA	142855060	142871094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142855386_142861051_142861187_142862016_142862134_142862755_142862834_142863130_142863328_142863630_142863696_142863965_142864750_142865474_142865631_142865959_142866317_142866480_142866606_142866905_142867069_142867607_142867723_142867996_142868050_142868240_142868361_142868491_142868740_142868973_142869148_142869816_142869967_142870213_142870408_142870529_142870686_142870795
transcript_133749.known	chr7	+	584	4	FSM	ENSG00000106123.12	ENST00000497095.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3295452099452	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGAAAGAACTGGAATAA	142855078	False	NA	NA	False	AGTAAA	-3	NA	142855103	142862788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_142855386_142861051_142861187_142861999_142862134_142862755
transcript_133757.known	chr7	-	2494	19	FSM	ENSG00000197993.9	ENST00000355265.7	2494	19	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_13	3.2867109906109	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCCTGCTATGTT	NA	False	NA	2	True	AATAAA	-32	NA	142962363	142941113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_142941414_142942433_142942530_142942874_142943045_142943275_142943344_142943485_142943597_142943782_142943884_142944322_142944401_142944642_142944742_142946206_142946318_142952508_142952639_142953807_142953957_142954183_142954373_142954464_142954528_142957826_142957974_142958303_142958429_142960927_142961105_142961359_142961502_142961794_142961873_142962203
transcript_133758.known	chr7	+	1032	8	FSM	ENSG00000197448.14	ENST00000358406.10	1032	8	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_4	27.6028688245794	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260842	True	NA	22	True	AATAAA	-23	NA	143263440	143269115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143265260_143265297_143267616_143267734_143268090_143268185_143268787
transcript_133760.known	chr7	+	888	7	FSM	ENSG00000197448.14	ENST00000409500.7	888	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	97.6672354932241	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAAGACGTCCACCATT	143260830	True	NA	-98	True	NA	NA	NA	143263428	143268995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265093_143267616_143267734_143268090_143268185_143268787
transcript_133761.known	chr7	+	1185	7	FSM	ENSG00000197448.14	ENST00000479303.1	1185	7	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_3	24.2653158964716	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTGTCTGTATCTGCC	143260857	True	NA	22	True	AATAAA	-23	NA	143263455	143269115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143263586_143264085_143264168_143264547_143264677_143264991_143265297_143267616_143267734_143268090_143268185_143268787
transcript_133765.known	chr7	+	1257	4	FSM	ENSG00000178826.11	ENST00000409244.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTGATCCCAAAGCCTAT	143284880	True	NA	NA	False	ATTAAA	-15	NA	143284950	143287296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143284975_143285347_143285446_143285940_143286203_143286423
transcript_133768.known	chr7	+	1907	3	FSM	ENSG00000178826.11	ENST00000409541.5	1907	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCCGTCTCCGTGAAGTT	143284883	True	NA	24	True	AATAAA	-15	NA	143284953	143288047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143284975_143285940_143286203_143286423
transcript_133771.known	chr7	+	675	2	FSM	ENSG00000178826.11	ENST00000487419.1	675	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGATGAGGTAGGGAGGT	143284876	True	NA	NA	False	NA	NA	NA	143284946	143287070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143284975_143286423
transcript_133774.known	chr7	+	1724	2	FSM	ENSG00000178826.11	ENST00000471161.1	1724	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTCCGTGAAGTTA	143285276	False	NA	25	True	AATAAA	-16	NA	143285346	143288048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143285446_143286423
transcript_133777.known	chr7	+	4089	11	FSM	ENSG00000106144.20	ENST00000310447.10	4089	11	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_10	9.95238664843765	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCTCAATATCTGTTT	143286045	True	NA	19	True	AATAAA	-20	NA	143288350	143307696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143288530_143291539_143291691_143292299_143292468_143292616_143292699_143294229_143294325_143294596_143294774_143299922_143300052_143300203_143300295_143303783_143303934_143304673_143304784_143304939
transcript_133778.known	chr7	+	3187	23	FSM	ENSG00000188037.14	ENST00000343257.7	3187	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.09820905193089	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTTTTAATGTGATAG	143316090	False	NA	NA	False	NA	NA	NA	143316110	143352083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143316393_143319754_143319876_143320663_143320796_143321364_143321494_143321714_143321849_143323308_143323387_143324413_143324493_143330771_143330898_143331231_143331317_143331550_143331653_143332418_143332504_143332723_143332874_143339252_143339323_143339510_143339622_143341928_143342143_143342371_143342506_143345520_143345763_143346139_143346252_143346578_143346659_143346910_143346950_143350371_143350477_143350567_143350655_143351593
transcript_133783.nnic	chr7	+	695	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2059	80	multi-exon	FALSE	canonical	0	0	junction_1	8.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	143361652	True	NA	83	True	ATTAAA	-19	NA	143361839	143364309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_143362058_143363189_143363258_143363900
transcript_133786.nnic	chr7	+	642	3	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-1591	80	multi-exon	FALSE	canonical	0	0	junction_1	8.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	143362297	False	NA	83	True	ATTAAA	-19	NA	143362307	143364309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_143362473_143363189_143363258_143363900
transcript_133788.nnic	chr7	+	534	2	Genic_Genomic	ENSG00000272619.1	novel	331	1	NA	NA	-2249	80	multi-exon	FALSE	canonical	2	9	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTCCATTATTCTAGCA	NA	False	NA	83	True	ATTAAA	-19	NA	143361649	143364309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_143361775_143363900
transcript_133789.known	chr7	+	331	1	FSM	ENSG00000272619.1	ENST00000609674.1	331	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGCTTTCATGGAATAT	143363876	False	NA	3	True	TATAAA	-16	NA	143363898	143364229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143363900_143364200
transcript_133790.known	chr7	-	648	2	FSM	ENSG00000232533.2	ENST00000429630.2	1186	2	535	3	-241	0	multi-exon	FALSE	canonical	3	72	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGCTATATGACTCAGTAT	-143380485	False	NA	-11	True	AATAAA	-19	NA	143380495	143379691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143380110_143380265
transcript_133797.nnic	chr7	+	825	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	-170	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	31.2836485510668	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	NA	False	NA	9	True	AATAAA	-23	NA	143407613	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143407891_143414323_143414446_143415067_143415200_143415536
transcript_133802.nnic	chr7	+	966	4	NNC	ENSG00000229153.6	novel	516	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	34.5671648951558	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143407679	True	NA	9	True	AATAAA	-23	NA	143407812	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143407891_143413983_143414446_143415067_143415200_143415536
transcript_133803.nnic	chr7	+	638	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	1147	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	37.3838943337309	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143408923	True	NA	9	True	AATAAA	-23	NA	143408959	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143409050_143414323_143414446_143415067_143415200_143415536
transcript_133810.nnic	chr7	+	1087	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2969	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	23.7954243967663	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410745	False	NA	9	True	AATAAA	-23	NA	143410781	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143413983_143414446_143415067_143415200_143415536
transcript_133811.nnic	chr7	+	726	4	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2990	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	24.7296493213219	170	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410298	True	NA	9	True	AATAAA	-23	NA	143410802	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143414323_143414446_143415067_143415200_143415536
transcript_133816.known	chr7	+	484	3	FSM	ENSG00000229153.6	ENST00000421648.2	516	3	29	3	20	0	multi-exon	FALSE	canonical	3	16	junction_1	33.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143407699	False	NA	9	True	AATAAA	-23	NA	143407832	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143407891_143415067_143415200_143415536
transcript_133823.nnic	chr7	+	630	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	2964	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	33	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTGATTTCTTGAGT	143410740	False	NA	9	True	AATAAA	-23	NA	143410776	143415830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067_143415200_143415536
transcript_133824.nnic	chr7	+	1050	3	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3051	-6	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	7	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAAGTCCAGGACAATTT	143410359	True	NA	4	True	AATAAA	-14	NA	143410863	143496766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067_143415200_143495965
transcript_133831.nnic	chr7	+	449	2	NNC	ENSG00000229153.6	novel	529	3	NA	NA	3019	-463	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCTAAGAGAGATCACT	143410327	True	NA	NA	False	NA	NA	NA	143410831	143415367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_143410981_143415067
transcript_133833.known	chr7	-	3310	18	FSM	ENSG00000146904.9	ENST00000275815.4	3310	18	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_12	63.0751186145162	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTGACTACTGAGAATTC	-143400254	True	NA	-6	True	NA	NA	NA	143408856	143391128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143391536_143391619_143391776_143393670_143393865_143394193_143394344_143394807_143395015_143395120_143395183_143395318_143395505_143396384_143396511_143397303_143397363_143397560_143397658_143397919_143398071_143398320_143398449_143398600_143398946_143399257_143399414_143399650_143400054_143401323_143401606_143407610_143407679_143408723
transcript_133839.known	chr7	+	2228	10	FSM	ENSG00000159840.16	ENST00000322764.10	2228	10	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_1	224.438448764802	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTAGTCAGCTCTTT	143367478	True	NA	17	True	AATAAA	-22	NA	143381344	143391111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_143381410_143381556_143381780_143382247_143382448_143382592_143382686_143382800_143383323_143388218_143388340_143388488_143388659_143388766_143388946_143389856_143389978_143390577
transcript_133842.nic	chr7	-	1402	3	ISM	ENSG00000146904.9	ENST00000488068.5	2922	16	-84	9027	-33	388	5prime_fragment	FALSE	canonical	3	508	junction_2	55	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATAACTCATCATGT	-143400287	True	NA	-13	True	AATAAA	-13	NA	143408889	143400437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_143401606_143407610_143407679_143408723
transcript_133844.known	chr7	-	651	2	FSM	ENSG00000146904.9	ENST00000458129.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTCTTCTCTCAGCTCCT	-143391363	False	NA	-1	True	AATAAA	-28	NA	143391391	143390288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143390646_143391097
transcript_133847.known	chr7	-	576	2	FSM	ENSG00000198420.10	ENST00000478172.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGCTTGCTCATAGGAGGAC	NA	False	NA	NA	False	AATGAA	-42	NA	143902198	143876171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143876623_143902073
transcript_133848.nic	chr7	-	652	2	ISM	ENSG00000198420.10	ENST00000479870.6	5754	9	-12	24824	10	-27	5prime_fragment	FALSE	canonical	3	53	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTCAAGTTCATGAAAT	-143900266	True	NA	NA	False	AATGAA	-15	NA	143902188	143876198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_143876623_143901960
transcript_133849.nic	chr7	-	575	2	ISM	ENSG00000198420.10	ENST00000355951.2	3343	9	-51	22503	-1	-27	5prime_fragment	FALSE	canonical	3	20	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTCAAGTTCATGAAAT	-143900255	True	NA	NA	False	AATGAA	-15	NA	143902177	143876198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_143876623_143902026
transcript_133850.known	chr7	-	5754	9	FSM	ENSG00000198420.10	ENST00000479870.6	5754	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	23.0162985729678	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGACTTCACATTGATT	-143900254	True	NA	NA	False	AATAAA	-17	NA	143902176	143851374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143854143_143857099_143857351_143858823_143859162_143860207_143860448_143861094_143861309_143862415_143862514_143862801_143863797_143875988_143876623_143901960
transcript_133851.known	chr7	-	634	2	FSM	ENSG00000198420.10	ENST00000491908.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGACAAGCCTGGGATTG	-143882712	True	NA	NA	False	NA	NA	NA	143882905	143876158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_143876623_143882735
transcript_133862.known	chr7	+	819	6	FSM	ENSG00000244198.7	ENST00000464929.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_3	180.666543665395	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	144195343	False	NA	NA	False	AATAAA	-15	NA	144195353	144243831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144239042_144239096_144239274_144239389_144243746
transcript_133869.nic	chr7	+	552	5	NIC	ENSG00000244198.7	novel	531	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	199.123077517399	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	144195510	False	NA	NA	False	AATAAA	-19	NA	144195520	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144243746
transcript_133870.known	chr7	+	531	5	FSM	ENSG00000244198.7	ENST00000493248.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_4	224.487611016733	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	144195508	False	NA	NA	False	AATAAA	-43	NA	144195518	144250505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144195702_144207692_144207805_144239039_144239096_144239274_144239389_144250439
transcript_133871.nic	chr7	+	473	5	NIC	ENSG00000244198.7	novel	819	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	196	junction_2	192.658214203288	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195596	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144195702_144207692_144207805_144239042_144239096_144239274_144239389_144243746
transcript_133872.nnic	chr7	+	528	5	NIC	ENSG00000244198.7	novel	819	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_3	182.558723428928	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195595	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144195702_144200170_144200278_144207692_144207805_144239274_144239389_144243746
transcript_133877.nic	chr7	+	591	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	171	junction_2	78.6650335282456	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195837	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144196058_144207692_144207805_144239039_144239096_144239274_144239389_144243746
transcript_133879.nic	chr7	+	588	5	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	73.030815413769	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195837	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144196058_144207692_144207805_144239042_144239096_144239274_144239389_144243746
transcript_133884.nnic	chr7	+	421	4	NIC	ENSG00000244198.7	novel	819	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	286	junction_2	195.080040553159	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195595	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144195702_144207692_144207805_144239274_144239389_144243746
transcript_133885.known	chr7	+	773	4	FSM	ENSG00000244198.7	ENST00000474656.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	165.572407792549	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACAAAAATGCTGATACT	144195347	False	NA	NA	False	AAGAAA	-44	NA	144195357	144214223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144195702_144200170_144200278_144207692_144207805_144214013
transcript_133891.nnic	chr7	+	535	4	NIC	ENSG00000244198.7	novel	423	5	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	3	172	junction_1	58.7329171381395	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTGTGATATTCT	NA	False	NA	NA	False	AATAAA	-19	NA	144195837	144243835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144196058_144207692_144207805_144239274_144239389_144243746
transcript_133895.known	chr7	+	4894	3	FSM	ENSG00000244198.7	ENST00000663681.1	4894	3	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	260	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAATATACTGTGCTATAC	NA	False	NA	-22	True	ATTAAA	-42	NA	144195596	144255116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144195702_144207692_144207805_144250439
transcript_133898.nic	chr7	+	2262	3	NIC	ENSG00000244198.7	novel	556	3	NA	NA	-50	-714	combination_of_known_junctions	FALSE	canonical	3	172	junction_1	206	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	NA	False	NA	NA	False	AATGAA	-18	NA	144195837	144215943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_144196058_144207692_144207805_144214013
transcript_133907.known	chr7	-	2609	2	FSM	ENSG00000213214.6	ENST00000378115.3	2609	2	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_1	0	442	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCATATTCAAACCATCT	NA	False	NA	NA	False	AATAAA	-22	NA	144195833	144186082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144188396_144195537
transcript_133909.known	chr7	-	2588	1	FSM	ENSG00000289604.1	ENST00000487179.2	2615	1	0	27	0	-27	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAATAAAGATGGTTTGA	-144269277	False	NA	NA	False	NA	NA	NA	144269288	144266700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144266700_144269300
transcript_133922.nnic	chr7	-	693	6	NIC	ENSG00000244479.7	novel	819	6	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	200	junction_3	177.367866311798	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355055	False	NA	NA	False	AATAAA	-18	NA	144355200	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144354981
transcript_133923.known	chr7	-	819	6	FSM	ENSG00000244479.7	ENST00000486094.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	173.525790590333	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCCAGTCTGTGATA	NA	False	NA	NA	False	AATAAA	-15	NA	144355685	144307147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144350717_144350825_144355337
transcript_133933.known	chr7	-	531	5	FSM	ENSG00000244479.7	ENST00000496968.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	221.876091546611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATGCAACACATCTAAAA	NA	False	NA	NA	False	AATAAA	-43	NA	144355520	144300470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144300537_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_133935.nic	chr7	-	586	5	NIC	ENSG00000244479.7	novel	422	5	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_4	76.1216132251544	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355055	False	NA	NA	False	AATAAA	-18	NA	144355200	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144354981
transcript_133937.nic	chr7	-	472	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	200	junction_3	188.703967896809	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355297	True	NA	NA	False	AATAAA	-18	NA	144355442	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311937_144343186_144343299_144355337
transcript_133939.nic	chr7	-	589	5	NIC	ENSG00000244479.7	novel	422	5	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_4	82.1047349426329	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355055	False	NA	NA	False	AATAAA	-18	NA	144355200	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311940_144343186_144343299_144354981
transcript_133941.nic	chr7	-	475	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_3	195.843687669529	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355297	True	NA	NA	False	AATAAA	-18	NA	144355442	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144311883_144311940_144343186_144343299_144355337
transcript_133943.nnic	chr7	-	640	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	19	0	combination_of_known_splicesites	FALSE	canonical	3	277	junction_4	182.221534128105	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355055	False	NA	NA	False	AATAAA	-18	NA	144355200	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144350717_144350825_144354981
transcript_133945.nic	chr7	-	526	5	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_2	175.909600363368	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355297	True	NA	NA	False	AATAAA	-18	NA	144355442	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144350717_144350825_144355337
transcript_133956.nic	chr7	-	533	4	NIC	ENSG00000244479.7	novel	422	5	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	172	junction_3	60.7965642304088	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355055	False	NA	NA	False	AATAAA	-18	NA	144355200	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144354981
transcript_133958.nic	chr7	-	419	4	NIC	ENSG00000244479.7	novel	819	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	284	junction_2	191.991319248206	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTGTGATATTC	-144355297	True	NA	NA	False	AATAAA	-18	NA	144355442	144307144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144307233_144311590_144311705_144343186_144343299_144355337
transcript_133968.nnic	chr7	-	2368	4	NIC	ENSG00000244479.7	novel	773	4	NA	NA	19	1720	combination_of_known_splicesites	FALSE	canonical	3	277	junction_3	177.571268947303	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355055	False	NA	NA	False	AATGAA	-18	NA	144355200	144335047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144336978_144343186_144343299_144350717_144350825_144354981
transcript_133981.nic	chr7	-	2261	3	NIC	ENSG00000244479.7	novel	773	4	NA	NA	19	1720	combination_of_known_junctions	FALSE	canonical	3	172	junction_2	173.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGTATGTCTTTATC	-144355055	False	NA	NA	False	AATGAA	-18	NA	144355200	144335047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_144336978_144343186_144343299_144354981
transcript_133983.known	chr7	+	5482	15	FSM	ENSG00000050327.15	ENST00000056217.10	5482	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	176.289013629695	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTCAAACTCCTCA	144344241	True	NA	12	True	AATAAA	-20	NA	144355401	144380632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_144355502_144362657_144365824_144366354_144366413_144366845_144366911_144367101_144367356_144371160_144371322_144371876_144372030_144372298_144372429_144372682_144372758_144373194_144373285_144374731_144374890_144375513_144375676_144377119_144377191_144378761_144378867_144379898
transcript_133984.known	chr7	-	602	4	FSM	ENSG00000244479.7	ENST00000470435.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	308.547493192791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGCGTCCGTGTGAAGAGA	-144355074	False	NA	NA	False	ACTAAA	-40	NA	144355219	144343170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144343299_144350717_144350825_144354031_144354161_144354981
transcript_133985.known	chr7	-	2439	9	FSM	ENSG00000196511.15	ENST00000360057.7	2439	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.10653744329409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTTCCTGAAGCTTAG	-144836040	False	NA	NA	False	AATAAA	-22	NA	144836053	144451940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144453664_144548490_144548603_144591422_144591570_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_133986.known	chr7	-	2283	8	FSM	ENSG00000196511.15	ENST00000378099.7	2283	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.65892813567591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAATATAGTTTCCT	-144836040	False	NA	NA	False	AATAAA	-13	NA	144836053	144451949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144453664_144548490_144548603_144623165_144623262_144648806_144648880_144682908_144682979_144765879_144765952_144835559_144835619_144835966
transcript_133989.known	chr7	-	521	2	FSM	ENSG00000196511.15	ENST00000548460.2	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAAGTGTTTTAAATCTA	-144835654	True	NA	NA	False	AATAAA	-18	NA	144835999	144835130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_144835619_144835966
transcript_133990.known	chr7	+	6076	4	FSM	ENSG00000174469.23	ENST00000463592.3	6076	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	18.1536650722535	688	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGATTCTTCGTGTTTTGTA	NA	False	NA	25	True	AATAAA	-31	NA	148339460	148420998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148339634_148383648_148383889_148409390_148409472_148415416
transcript_133991.known	chr7	+	3086	22	FSM	ENSG00000055130.18	ENST00000662716.1	3086	22	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	122.473505858158	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTTTAATGTGTGAAAA	NA	False	NA	4	True	NA	NA	NA	148698071	148800988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148698260_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_133992.known	chr7	+	2938	22	FSM	ENSG00000055130.18	ENST00000665936.1	2938	22	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	124.034941313594	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAATAAAGAAAATTAAAGG	148698485	False	NA	-12	True	NA	NA	NA	148698516	148801004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148698541_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_133993.known	chr7	+	3054	22	FSM	ENSG00000055130.18	ENST00000602748.5	3054	22	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	113.574633078481	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTACAAGTCGCATTG	148698484	True	NA	9	True	AATAAA	-14	NA	148698644	148801025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148698764_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_133994.known	chr7	+	3147	22	FSM	ENSG00000055130.18	ENST00000325222.9	3147	22	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_1	53.5740740087562	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTAGTGTCTTCCTGT	148692683	True	NA	24	True	AATAAA	-25	NA	148698902	148801110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_133996.known	chr7	+	3080	21	FSM	ENSG00000055130.18	ENST00000662132.1	3080	21	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	125.588803242964	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAATGATTGTGCAAATT	148692677	True	NA	2	True	AATAAA	-3	NA	148698896	148801088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756982_148757151_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_134003.nic	chr7	+	1824	2	ISM	ENSG00000055130.18	ENST00000655324.1	2887	21	-51	69411	-42	-28914	5prime_fragment	FALSE	canonical	3	455	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTGCAGTGGTTTTTAG	148698768	False	NA	3	True	CATAAA	-21	NA	148698814	148731570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_148699030_148729961
transcript_134005.known	chr7	+	3056	22	FSM	ENSG00000055130.18	ENST00000662670.1	3056	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	128.306517208896	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGTACAAGTCGCATT	148692703	True	NA	8	True	AATAAA	-13	NA	148698922	148801024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148699030_148729961_148730263_148753975_148754151_148756967_148757151_148759303_148759355_148759547_148759639_148760332_148760497_148766560_148766724_148767618_148767750_148783782_148783891_148783970_148784078_148786550_148786600_148786988_148787121_148788556_148788675_148789749_148789827_148790309_148790442_148792725_148792819_148797811_148797860_148797936_148798020_148798571_148798678_148799274_148799389_148800501
transcript_134006.nnic	chr7	-	702	4	NNC	ENSG00000106462.12	novel	2522	20	NA	NA	1780	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	177.01663449769	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTGAATCATCTCTCA	-148810032	False	NA	-19	True	AATAAA	-17	NA	148810043	148807383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_148807707_148809070_148809156_148809309_148809391_148809830
transcript_134007.known	chr7	-	2591	20	FSM	ENSG00000106462.12	ENST00000460911.5	2591	20	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_17	54.9116136947327	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTTGAATCATCTCTC	-148877897	True	NA	-20	True	AATAAA	-16	NA	148884245	148807384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_148807707_148809070_148809156_148809309_148809391_148810332_148810415_148811624_148811721_148813958_148814138_148814913_148815040_148815505_148815547_148816683_148816779_148817221_148817392_148817876_148818118_148819595_148819688_148826468_148826633_148827163_148827267_148828739_148828881_148829727_148829849_148832633_148832751_148846469_148846599_148847181_148847306_148884163
transcript_134008.known	chr7	+	1906	1	FSM	ENSG00000281189.1	ENST00000627071.1	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGATGTTGGTGTTGATATG	148987449	True	NA	NA	False	AATAAA	-20	NA	148987526	148989432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_148987500_148989400
transcript_13401.known	chr1	+	8291	9	FSM	ENSG00000116747.13	ENST00000400968.7	8291	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	11.8189466535728	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193052198	True	NA	NA	False	NA	NA	NA	193059611	193091219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_134011.known	chr7	-	2921	10	FSM	ENSG00000155660.11	ENST00000286091.9	2921	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	1143.39631615747	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTAAGAACTGCGTTAGAA	-149028648	False	NA	-23	True	AATAAA	-14	NA	149028662	149003067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149004210_149005140_149005375_149005896_149006057_149008158_149008311_149011845_149012005_149012154_149012361_149014903_149015043_149018991_149019198_149020966_149021148_149028320
transcript_134013.known	chr7	-	3209	4	FSM	ENSG00000197362.15	ENST00000491431.2	3209	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	12.9700509722291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAT	-149088519	True	NA	NA	False	NA	NA	NA	149090718	149069640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149072474_149074385_149074539_149080590_149080718_149090622
transcript_134015.known	chr7	-	3144	3	FSM	ENSG00000197362.15	ENST00000316286.13	3144	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TCAAAAAAAAAAAAAAAAAA	-149088583	True	NA	NA	False	NA	NA	NA	149090782	149069642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149072474_149074385_149074539_149090622
transcript_134018.known	chr7	-	3198	4	FSM	ENSG00000204947.9	ENST00000378061.7	3198	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	5.8878405775519	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTACCCATGTGTTCTTT	-149126304	False	NA	-6	True	AATAAA	-28	NA	149126324	149102783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149105567_149112136_149112296_149118221_149118349_149126195
transcript_134019.nic	chr7	-	489	3	ISM	ENSG00000204947.9	ENST00000378061.7	3198	4	42	9237	24	-3	5prime_fragment	FALSE	canonical	3	51	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTAGTTTTCTTTACT	-149125339	True	NA	NA	False	AATAAA	-19	NA	149126282	149112020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_149112296_149118221_149118349_149126195
transcript_134024.nnic	chr7	-	1685	2	Antisense	novelGene_ENSG00000197024.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGTATAATTTTATT	-149147352	False	NA	NA	False	AAGAAA	-2	NA	149147365	149144930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_149146353_149147102
transcript_134027.nnic	chr7	-	752	2	Antisense	novelGene_ENSG00000197024.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGACCTGCGAGA	-149147297	True	NA	NA	False	NA	NA	NA	149147332	149145950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_149146353_149146982
transcript_134029.nnic	chr7	-	665	2	Antisense	novelGene_ENSG00000197024.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGACCTGCGAGA	-149147352	False	NA	NA	False	NA	NA	NA	149147365	149145950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_149146353_149147102
transcript_13403.known	chr1	+	3081	9	FSM	ENSG00000116747.13	ENST00000367446.7	3081	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	25.3448096264304	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTTGCTCATAATTTT	193060013	False	NA	10	True	ATTAAA	-20	NA	193060033	193085985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193060223_193069033_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_134032.known	chr7	+	5268	7	FSM	ENSG00000197024.9	ENST00000426851.6	5268	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118.220133649053	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGATGGCCCTGCTCCTTT	149125909	True	NA	32	True	AATAAA	-32	NA	149126415	149182802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149126656_149128822_149128945_149153944_149154341_149166157_149166285_149166816_149166931_149176467_149176582_149178647
transcript_134033.known	chr7	+	3651	8	FSM	ENSG00000170265.12	ENST00000610704.5	3651	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_2	3.71977616179758	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAATTCAATGGGGTATTT	149192148	True	NA	13	True	AGTAAA	-18	NA	149195545	149226238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149195755_149198332_149198753_149206695_149206823_149207350_149207471_149210584_149210705_149212357_149212472_149213700_149213815_149223811
transcript_134034.known	chr7	+	2807	5	FSM	ENSG00000170260.9	ENST00000335870.7	2807	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	15.1554445662277	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATACTGGATGTTTTTC	149238254	True	NA	6	True	AATAAA	-30	NA	149239650	149255606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149239803_149250158_149250549_149250680_149250808_149252705_149252796_149253558
transcript_134035.nic	chr7	+	1149	5	NIC	ENSG00000133619.18	novel	3827	17	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	14.0423466699836	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCCATTTAGCTGTGGTT	149713678	True	NA	9	True	AATAAA	-21	NA	149714981	149722040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_149715067_149719545_149719673_149720007_149720128_149720834_149720991_149721379
transcript_134044.known	chr7	-	2973	4	FSM	ENSG00000204934.10	ENST00000461019.5	2973	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGAAAGCACTTTGTAAA	-149873745	True	NA	-5	True	AGTAAA	-17	NA	149873845	149867772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_149869859_149870241_149870352_149871641_149871797_149873223
transcript_134046.known	chr7	+	1666	4	FSM	ENSG00000171130.19	ENST00000479613.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	78.4063489492755	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGATTACTGTTTGGTGA	149870941	True	NA	26	True	AATAAA	-12	NA	149873975	149880689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878747_149879334
transcript_134047.known	chr7	+	1723	4	FSM	ENSG00000171130.19	ENST00000425642.3	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	5.43650214343336	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTTTGGTGACAAAGC	149870934	True	NA	32	True	AATAAA	-18	NA	149873968	149880695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149878677_149878791_149879334
transcript_134051.known	chr7	+	893	3	FSM	ENSG00000171130.19	ENST00000606024.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	80	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGATGTCTTCCCTC	149870952	True	NA	NA	False	NA	NA	NA	149873986	149879996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149879334
transcript_134052.known	chr7	+	495	5	FSM	ENSG00000171130.19	ENST00000464683.5	495	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	82.2507598749094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCCACTGTCCCTGACA	149870941	True	NA	NA	False	NA	NA	NA	149873975	149879357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_149874170_149875597_149875646_149875972_149876090_149878677_149878791_149879334
transcript_134053.known	chr7	-	1157	8	FSM	ENSG00000106526.11	ENST00000683684.1	1157	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	33.6409614267233	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTTTGTTTTTCTCA	-150323455	True	NA	NA	False	AATAAA	-16	NA	150323545	150247211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150247570_150248947_150249055_150284752_150284846_150286366_150286541_150289449_150289594_150293311_150293420_150295251_150295348_150323468
transcript_13407.known	chr1	+	7848	8	FSM	ENSG00000116747.13	ENST00000432079.5	7848	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	27.452370627347	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATTCCAAGAAGTGAATAT	193059290	True	NA	NA	False	NA	NA	NA	193059453	193091219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_134075.known	chr7	+	1815	3	FSM	ENSG00000127399.15	ENST00000359623.9	1815	3	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_2	13.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGCCTGGCATTTCATG	150320821	True	NA	21	True	ATTAAA	-21	NA	150323354	150338156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150323561_150325840_150326011_150336717
transcript_134078.known	chr7	-	685	6	FSM	ENSG00000106538.10	ENST00000223271.8	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	1941	junction_5	117.264828486635	14577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTCTCAGCTCCTTGT	-150315856	True	NA	-15	True	AATAAA	-13	NA	150341629	150338328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_134079.known	chr7	-	1618	5	FSM	ENSG00000106538.10	ENST00000466675.5	1618	5	0	0	0	0	multi-exon	FALSE	canonical	3	1956	junction_1	115.371952830833	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGCCATGATAATAAAGCT	-150315870	True	NA	-44	True	NA	NA	NA	150341643	150338357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338614_150338742_150338985_150339082_150340099_150340205_150340435
transcript_134080.known	chr7	-	583	5	FSM	ENSG00000106538.10	ENST00000467793.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	895.027792864557	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCCAGCTGCCTCTCAG	-150315889	True	NA	-23	True	AATAAA	-5	NA	150341662	150338336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338440_150338985_150339082_150340099_150340205_150340435_150340630_150341577
transcript_134081.known	chr7	-	563	5	FSM	ENSG00000106538.10	ENST00000482669.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	905.044025172257	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGCACTGGTAGGCACCA	-150315887	True	NA	NA	False	NA	NA	NA	150341660	150338624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150338742_150338985_150339082_150340099_150340205_150340435_150340630_150341609
transcript_134083.known	chr7	+	582	3	FSM	ENSG00000284048.2	ENST00000483664.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTTCCAGATGTGAATG	150377387	True	NA	NA	False	NA	NA	NA	150379328	150410597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150379393_150388421_150388502_150410159
transcript_134085.nnic	chr7	+	590	2	NNC	ENSG00000196456.13	novel	2261	3	NA	NA	-43	-11129	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGGAGATAGTTTTGTG	150377345	True	NA	2	True	AATAAA	-16	NA	150379286	150385786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_150379393_150385302
transcript_134086.known	chr7	+	559	2	FSM	ENSG00000284691.1	ENST00000641234.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGACACATCCAGTAAG	150404852	False	NA	NA	False	NA	NA	NA	150404863	150410264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150405318_150410159
transcript_134087.known	chr7	+	571	2	FSM	ENSG00000284691.1	ENST00000642008.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCCAGATGTGAATGAA	150405466	False	NA	NA	False	NA	NA	NA	150405773	150410599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150405905_150410159
transcript_134088.nnic	chr7	-	549	2	Antisense	novelGene_ENSG00000284691.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTTCCTCCAACACTCA	-150405541	False	NA	-15	True	AATAAA	-14	NA	150405597	150404455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr7_-_150404778_150405370
transcript_13409.known	chr1	+	1474	7	FSM	ENSG00000116747.13	ENST00000460715.2	1474	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.2925266193419	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGATTAAATTATGAATGA	193052209	True	NA	-24	True	NA	NA	NA	193059622	193085235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_134090.known	chr7	+	2261	3	FSM	ENSG00000196456.13	ENST00000329630.10	2261	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	7.5	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGGTTTGATGTCCCT	150377388	True	NA	7	True	AATAAA	-15	NA	150379329	150398630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150379393_150388421_150388502_150396512
transcript_134095.known	chr7	+	1033	7	FSM	ENSG00000002933.9	ENST00000004103.8	1033	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.15470053837925	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCGCTTAGTTATTCC	NA	False	NA	NA	False	AATAAA	-21	NA	150800768	150805118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150800829_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804361_150804473_150804826
transcript_134096.known	chr7	+	1530	7	FSM	ENSG00000002933.9	ENST00000484928.5	1530	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.06718737290547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTCCCAGGTTCTCGCTT	NA	False	NA	NA	False	AATAAA	-12	NA	150800402	150805109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_150800969_150801535_150801725_150802214_150802326_150803399_150803457_150803619_150803833_150804361_150804473_150804826
transcript_134097.known	chr7	-	1430	7	FSM	ENSG00000106565.18	ENST00000447204.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.38443731048635	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATGGTTTCCCTTTGTTT	NA	False	NA	3	True	AATAAA	-30	NA	150801360	150791286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800992
transcript_134099.known	chr7	-	1115	7	FSM	ENSG00000106565.18	ENST00000326442.10	1115	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	1.10554159678513	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTGCCCAGAAAGATATG	NA	False	NA	-11	True	AATAAA	-16	NA	150800364	150791300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_150791624_150792055_150792176_150793087_150793316_150793543_150793601_150793960_150794072_150796365_150796575_150800297
transcript_134102.known	chr7	+	1143	7	FSM	ENSG00000164867.11	ENST00000475017.1	1143	7	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_6	7.97913946905722	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAACTGAAAGTGTCTT	151008779	True	NA	8	True	AATAAA	-18	NA	151008936	151012065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151009063_151009188_151009268_151009397_151009586_151010114_151010288_151010596_151010808_151010898_151010987_151011787
transcript_134104.known	chr7	+	1111	6	FSM	ENSG00000164867.11	ENST00000477227.1	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	6.41872261435249	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAAGGATTCAGCATTAT	151010423	True	NA	NA	False	NA	NA	NA	151010532	151014289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151010808_151010898_151010987_151012350_151012473_151013230_151013380_151013723_151013919_151014007
transcript_134110.known	chr7	+	2487	17	FSM	ENSG00000197150.13	ENST00000297504.10	2487	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.0783008144898	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAGAGTCTGCCAGAGTCA	151027181	True	NA	13	True	NA	NA	NA	151028449	151045562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151031240_151031292_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_134111.known	chr7	+	4656	16	FSM	ENSG00000197150.13	ENST00000358849.9	4656	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	10.0111049451208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGGTATGCAGCCCTTT	151027181	True	NA	13	True	AATAAA	-20	NA	151028449	151047782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_134114.known	chr7	+	1994	15	FSM	ENSG00000197150.13	ENST00000482309.5	1994	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	21.6258773562732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGGAGCCTACTGGGGACT	151027157	True	NA	NA	False	GGGGCT	-7	NA	151028425	151045409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151040267_151040302_151040497_151040635_151040827_151040923_151041098_151041233_151041960_151042109_151043970_151044222_151045208
transcript_134115.known	chr7	+	1596	10	FSM	ENSG00000197150.13	ENST00000477092.5	1596	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	22.7341044726384	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCTGTAACAGATCATC	151027198	True	NA	18	True	CATAAA	-29	NA	151028466	151037570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037240
transcript_134116.nic	chr7	+	1610	10	NIC	ENSG00000197150.13	novel	1596	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	24.9977776790036	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAAAGGGTGAAGACCCG	151027157	True	NA	34	True	AGTAAA	-16	NA	151028425	151037586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_151028611_151033604_151033918_151034272_151034429_151034504_151034600_151034723_151034830_151035580_151035743_151035881_151035968_151036072_151036171_151036543_151036650_151037283
transcript_134123.known	chr7	+	2053	11	FSM	ENSG00000213199.8	ENST00000349064.10	2053	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.2142615011411	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCAGCTGTTTCTCTTAC	NA	False	NA	6	True	AATAAA	-15	NA	151048530	151052754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151049420_151050105_151050257_151050480_151050609_151050757_151050954_151051038_151051096_151051171_151051320_151051809_151051902_151051982_151052063_151052165_151052238_151052415_151052475_151052573
transcript_134125.known	chr7	+	825	4	FSM	ENSG00000213199.8	ENST00000498105.1	825	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.24264068711928	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATAAAGTCCTAATGCAT	NA	False	NA	-16	True	NA	NA	NA	151051233	151052732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151051320_151051809_151051902_151051982_151052063_151052165
transcript_134126.known	chr7	+	4119	23	FSM	ENSG00000164889.15	ENST00000413384.7	4119	23	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	49.1571312600624	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATCTGTGGCCTTTTGTC	151054577	True	NA	2	True	AGTAAA	-16	NA	151059588	151076523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151059763_151061924_151062039_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_134128.known	chr7	+	3947	22	FSM	ENSG00000164889.15	ENST00000392826.6	3947	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	90.2805905719142	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTATCTGTGGCCTTTTGT	151062536	False	NA	1	True	AGTAAA	-15	NA	151062546	151076522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151062664_151064201_151064368_151064525_151064768_151064847_151064967_151066516_151066762_151066850_151066994_151067873_151068055_151069946_151070083_151070180_151070347_151070456_151070572_151070726_151070912_151071071_151071298_151071389_151071606_151071688_151071838_151071941_151072137_151074038_151074294_151074398_151074489_151074674_151074842_151075254_151075509_151075605_151075776_151076012_151076187_151076286
transcript_13413.known	chr1	-	1131	4	FSM	ENSG00000023572.10	ENST00000367440.3	1131	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.6650485246234	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCACTTGCCAATTCTT	NA	False	NA	-23	True	AATAAA	-19	NA	193106114	193096467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105516
transcript_134141.known	chr7	-	1122	12	FSM	ENSG00000164885.13	ENST00000485972.6	1122	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.1518761102435	2024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTGATGTGGTGGTC	-151055184	True	NA	-8	True	CATAAA	-18	NA	151057897	151053814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151054096_151054211_151054293_151054404_151054466_151055026_151055097_151055276_151055374_151055531_151055607_151055752_151055849_151056579_151056637_151056735_151056797_151056907_151056976_151057071_151057161_151057811
transcript_134143.known	chr7	-	1402	9	FSM	ENSG00000164896.21	ENST00000353841.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	138.739357699969	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071392	False	9450	26	True	ATTAAA	-14	NA	151080842	151076625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151080684
transcript_134147.known	chr7	-	1521	8	FSM	ENSG00000164896.21	ENST00000460980.5	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	147.091253086966	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCGTTGTGAATCTCAG	-151071416	False	9450	23	True	ATTAAA	-11	NA	151080866	151076628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151078093_151078561_151078702_151078841_151079022_151080684
transcript_134161.known	chr7	-	1794	10	FSM	ENSG00000164896.21	ENST00000297532.11	1794	10	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_9	56.5921078125446	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGTGAATCTCAGTTTTG	-151071359	False	9450	28	True	ATTAAA	-16	NA	151080809	151076623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_134162.known	chr7	-	1764	10	FSM	ENSG00000164896.21	ENST00000482571.2	1764	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	130.256157883866	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGTTGTGAATCTCAGTTT	-151071412	False	9450	26	True	ATTAAA	-14	NA	151080862	151076625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077237_151077309_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078922_151079022_151079499_151079923_151080684
transcript_134163.known	chr7	-	1826	9	FSM	ENSG00000164896.21	ENST00000482806.5	1826	9	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_8	59.8560773856757	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAAAGTTCCTTTCCTTC	-151071340	False	9450	6	True	NA	NA	NA	151080790	151076645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151076833_151076912_151077028_151077100_151077402_151077620_151077781_151077878_151078093_151078561_151078702_151078841_151079022_151079499_151079923_151080684
transcript_13417.known	chr1	+	592	2	FSM	ENSG00000116747.13	ENST00000469214.2	592	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAACAAATGTCGTGTA	193052181	True	NA	NA	False	NA	NA	NA	193059594	193060283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193059777_193059873
transcript_134175.nnic	chr7	+	960	2	NNC	ENSG00000133612.19	novel	604	5	NA	NA	-4	-12557	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCAGAGTGCACATTTAT	151085836	False	NA	3	True	AATAAA	-13	NA	151085862	151105125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_+_151086061_151104363
transcript_134176.known	chr7	+	422	2	FSM	ENSG00000133612.19	ENST00000467250.1	422	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTAATTGATGGCTCCAT	151134448	True	NA	NA	False	NA	NA	NA	151134481	151136560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151134569_151136225
transcript_13418.known	chr1	-	1355	12	FSM	ENSG00000116750.14	ENST00000367450.7	1355	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	174.000189987547	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACTGTTAGTTTTCTGGT	-193059182	False	NA	38	True	NA	NA	NA	193059296	193016102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023040_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_134180.known	chr7	-	4527	15	FSM	ENSG00000033050.9	ENST00000287844.7	4527	15	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_14	40.4058492431631	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGCCTTGTTTTGGATT	-151222323	True	NA	-2	True	AATACA	-15	NA	151227205	151211483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151214192_151214878_151215083_151215603_151215733_151215966_151216030_151218080_151218192_151218560_151218651_151218753_151218874_151219063_151219160_151221577_151221681_151222520_151222617_151223677_151223850_151223931_151224115_151224775_151224989_151226304_151226501_151227162
transcript_134183.known	chr7	+	574	1	FSM	ENSG00000272661.1	ENST00000607902.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCAGGTTTATCTGCTG	151240387	False	NA	9	True	AATAAA	-19	NA	151240398	151240972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151240400_151241000
transcript_134187.known	chr7	+	3107	15	FSM	ENSG00000013374.17	ENST00000413040.7	3107	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_12	126.441101074043	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	151336348	True	NA	16	True	AATAAA	-23	NA	151341771	151378449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374202_151375847_151375944_151376633_151376812_151377046
transcript_134189.known	chr7	+	3109	15	FSM	ENSG00000013374.17	ENST00000568733.6	3109	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	137.027946650548	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCACCCTAATTTTGCAT	151336388	True	NA	16	True	AATAAA	-23	NA	151341811	151378449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_13419.known	chr1	-	1507	11	FSM	ENSG00000116750.14	ENST00000367449.5	1507	11	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	133.04469173928	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193059295	False	NA	NA	False	AATAAA	-20	NA	193059409	193018404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193018821_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_134193.known	chr7	+	3210	15	FSM	ENSG00000013374.17	ENST00000470229.6	3210	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	144.256450356259	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAATATATTCAAAAATT	151336388	True	NA	-2	True	AATAAA	-5	NA	151341811	151378431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360248_151366938_151367126_151367860_151367969_151368734_151368888_151374096_151374244_151375847_151375944_151376633_151376812_151377046
transcript_1342.known	chr1	-	786	4	FSM	ENSG00000116251.11	ENST00000497965.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	2976.84053243629	136821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTTTATCCTTGTATC	-6199956	True	NA	NA	False	AATAAA	-16	NA	6200842	6186614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6200488
transcript_13420.known	chr1	-	1534	12	FSM	ENSG00000116750.14	ENST00000367448.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	158.620447234875	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGAGACTTCTATTT	-193050739	True	NA	NA	False	AATAAA	-20	NA	193059361	193018404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193018821_193020306_193020382_193021096_193021196_193022925_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_13421.known	chr1	-	834	9	FSM	ENSG00000116750.14	ENST00000421683.1	834	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	154.724755614607	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGCTTATTGAAGAAGAAGT	-193059407	False	NA	-16	True	NA	NA	NA	193059521	193022967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193023037_193023843_193023947_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059412
transcript_134210.known	chr7	+	1703	9	FSM	ENSG00000013374.17	ENST00000468404.5	1703	9	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_8	95.4502488210481	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	151336380	True	NA	22	True	AATAAA	-28	NA	151341803	151361249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151341847_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_134211.nic	chr7	+	1818	9	NIC	ENSG00000013374.17	novel	1703	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	136.516253611063	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACCAAAGAGGTTTCTT	151336384	True	NA	22	True	AATAAA	-28	NA	151341807	151361249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_+_151341966_151345347_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_13422.known	chr1	+	1791	8	FSM	ENSG00000116747.13	ENST00000367441.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	11.141025490483	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAGGAAA	193068898	False	NA	16	True	AATGAA	-44	NA	193069015	193084866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193069635_193075819_193076041_193076500_193076648_193076912_193077051_193081363_193081481_193082185_193082300_193082561_193082709_193084578
transcript_134224.known	chr7	+	704	4	FSM	ENSG00000243836.6	ENST00000480632.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7.78888096369861	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTTTGTGTAAGATGAT	151409186	True	NA	18	True	AATAAA	-33	NA	151409235	151413048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151409383_151411669_151411793_151411966_151412071_151412718
transcript_13423.known	chr1	-	5612	5	FSM	ENSG00000023572.10	ENST00000608166.2	5612	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.4710674620516	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGAGTTCTGTATTTCA	-193103513	True	NA	0	True	ATTAAA	-14	NA	193105433	193090865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193095250_193095942_193096760_193097583_193097761_193101140_193101205_193105263
transcript_134231.known	chr7	+	767	7	FSM	ENSG00000013374.17	ENST00000483358.5	767	7	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	26.9552097623694	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCCATGTCTGTTGGA	151339921	False	NA	NA	False	AAGAAA	-14	NA	151345344	151360209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151345467_151349072_151349241_151351423_151351483_151352811_151352883_151355767_151355951_151356127_151356223_151360140
transcript_134232.known	chr7	+	1752	9	FSM	ENSG00000013374.17	ENST00000470316.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	182.28544751296	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCCTCCAAAGGTGACCA	151339921	False	NA	10	True	AATAAA	-16	NA	151345344	151361237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151345467_151349072_151349241_151351423_151351483_151352092_151352194_151352811_151352883_151355767_151355951_151356127_151356223_151360140_151360915_151361058
transcript_134233.known	chr7	-	1989	4	FSM	ENSG00000127377.10	ENST00000337323.3	1989	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGGCAGCTTGTAATT	-151440079	True	NA	NA	False	AAAACA	-18	NA	151440141	151428831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151430181_151436179_151436326_151437995_151438245_151439896
transcript_134235.known	chr7	-	2367	4	FSM	ENSG00000127377.10	ENST00000476631.5	2367	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTGGGCAGCTTGTA	-151440797	False	NA	NA	False	AAAACA	-15	NA	151440813	151428834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151430181_151436179_151436326_151437838_151438245_151440344
transcript_13424.known	chr1	-	682	4	FSM	ENSG00000023572.10	ENST00000367439.8	682	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	10.7082522694727	1316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCACTTGCCAATTC	-193103494	True	NA	-25	True	AATAAA	-17	NA	193105414	193096469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193096760_193097583_193097761_193101140_193101205_193105263
transcript_134241.known	chr7	-	1153	9	FSM	ENSG00000106615.10	ENST00000478470.5	1153	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	994.605378718113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGAGTTCACTTCCATT	-151519839	False	NA	NA	False	NA	NA	NA	151519851	151466952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151498088_151498181_151519459
transcript_134245.known	chr7	-	2046	8	FSM	ENSG00000106615.10	ENST00000262187.10	2046	8	0	0	0	0	multi-exon	FALSE	canonical	3	2151	junction_6	110.51105771619	3216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATTGTTAATGAAAAAT	-151519883	False	NA	-3	True	AATAAA	-19	NA	151519895	151466011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519459
transcript_134246.known	chr7	-	744	8	FSM	ENSG00000106615.10	ENST00000496004.5	744	8	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	798.113208685053	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACTGGGAATATATTCT	NA	False	NA	NA	False	NA	NA	NA	151520120	151467100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151467212_151470570_151470653_151471393_151471442_151471548_151471606_151477332_151477416_151484736_151484805_151490942_151491015_151519897
transcript_13425.known	chr1	-	1346	12	FSM	ENSG00000116750.14	ENST00000367451.8	1346	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	169.214373302717	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAATGAAAGTGATATTAA	-193050727	True	NA	-21	True	CATAAA	-38	NA	193059349	193016161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193016396_193021096_193021196_193022925_193023037_193023843_193023947_193027874_193027956_193028084_193028149_193029178_193029310_193029387_193029450_193029531_193029658_193049745_193049852_193051753_193051818_193059184
transcript_134259.known	chr7	-	2318	12	FSM	ENSG00000106617.15	ENST00000418337.6	2318	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_5	19.0826822100715	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTTAAAGAAGTTATTT	-151632342	False	65	1	True	ATTAAA	-21	NA	151632353	151556123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595455_151632068
transcript_13426.known	chr1	-	784	5	FSM	ENSG00000116750.14	ENST00000449480.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	190.62594262062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTAAACTGGTTGTCTTAT	-193023927	False	NA	NA	False	TTTAAA	-29	NA	193023940	193015993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_193016396_193020306_193020382_193021096_193021196_193022925_193023037_193023843
transcript_134264.known	chr7	-	1910	4	FSM	ENSG00000106617.15	ENST00000652572.1	1910	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	11.7851130197758	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTACAAAAAAAAAAAAAAA	-151631593	True	NA	NA	False	NA	NA	NA	151632203	151573366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151574950_151576370_151576453_151595344_151595455_151632068
transcript_134265.known	chr7	-	2696	14	FSM	ENSG00000106617.15	ENST00000492843.6	2696	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	58.5431616429103	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGATTGAAAAATTAAAATA	NA	False	NA	13	True	NA	NA	NA	151736314	151556160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151557233_151560523_151560618_151564077_151564225_151565345_151565384_151565719_151565886_151568715_151568843_151570170_151570226_151572663_151572710_151574890_151574950_151576370_151576453_151595344_151595452_151632068_151632139_151675419_151675638_151735899
transcript_134266.known	chr7	-	510	2	FSM	ENSG00000106617.15	ENST00000474383.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAATGAAAAATACCAGG	-151876774	False	NA	NA	False	AATAAA	-9	NA	151876788	151837267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_151837496_151876506
transcript_134267.known	chr7	+	1064	2	FSM	ENSG00000239911.3	ENST00000467458.3	1076	2	6	6	6	0	multi-exon	FALSE	canonical	3	5	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGAGCCTTTTTTTAA	151877447	True	NA	12	True	ATTAAA	-23	NA	151877464	151879223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151877867_151878561
transcript_134268.nnic	chr7	+	605	2	FSM	ENSG00000239911.3	ENST00000690829.1	751	2	137	9	-35	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGCATTTTAAGAGCC	151877599	False	NA	3	True	ATTAAA	-14	NA	151877616	151879214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_151877867_151878859
transcript_134269.known	chr7	+	2739	12	FSM	ENSG00000178234.13	ENST00000430044.7	2739	12	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	27.1067677804664	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGGATATTTTGTCTTGT	152021880	True	NA	13	True	AATAAA	-16	NA	152025673	152122340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_152025885_152094189_152094523_152100797_152100922_152103111_152103279_152105244_152105371_152108037_152108288_152110527_152110646_152113245_152113399_152117156_152117376_152118677_152118783_152120830_152120969_152121545
transcript_13427.known	chr1	+	5869	17	FSM	ENSG00000134371.14	ENST00000367435.5	5869	17	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_8	27.633482860472	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTCATGCTATGTCG	193115884	True	NA	27	True	AATAAA	-28	NA	193122030	193254815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_193122332_193125111_193125218_193130173_193130244_193135390_193135454_193135536_193135590_193138084_193138174_193141849_193142067_193147866_193147966_193150303_193150383_193152379_193152445_193203794_193203853_193212064_193212101_193212389_193212478_193232992_193233155_193236255_193236357_193249729_193249872_193250675
transcript_134301.known	chr7	-	4771	3	FSM	ENSG00000196584.3	ENST00000359321.2	4771	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	18.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATGATGTCTTTTGTTT	-152668883	True	NA	-28	True	TATAAA	-1	NA	152676141	152644775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_152649364_152660700_152660783_152676040
transcript_134307.nnic	chr7	-	703	3	NNC	ENSG00000196584.3	novel	4771	3	NA	NA	-67	-12001	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	52.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATGTAAGACAAAAAACAGA	-152668950	True	NA	NA	False	AATAAA	-19	NA	152676208	152656779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_152657233_152660700_152660783_152676040
transcript_134311.nic	chr7	-	296	2	ISM	ENSG00000196584.3	ENST00000359321.2	4771	3	-67	15879	-67	-15876	5prime_fragment	FALSE	canonical	3	124	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTTTCACATAAGCTCA	-152668950	True	NA	NA	False	AATAAA	-18	NA	152676208	152660654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_152660783_152676040
transcript_134314.known	chr7	+	2213	12	FSM	ENSG00000133627.18	ENST00000256001.13	2213	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_2	45.6119094205859	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTGTAGTGTGGTGG	152754643	True	NA	20	True	AATAAA	-26	NA	152759751	152855378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_152759927_152783186_152783243_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_134318.known	chr7	+	1692	11	FSM	ENSG00000133627.18	ENST00000397282.2	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	59.3164395425079	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGTAAATAAAATGTTTAAA	152754679	True	NA	-17	True	NA	NA	NA	152759787	152854949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_152759927_152800530_152800656_152801620_152801732_152814549_152814646_152816480_152816589_152820298_152820443_152823341_152823516_152825029_152825123_152852125_152852252_152853493_152853578_152854457
transcript_134322.nnic	chr7	+	1007	3	Genic_Genomic	ENSG00000273344.1	novel	2256	1	NA	NA	-45	-835	multi-exon	FALSE	canonical	0	0	junction_1	39	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGGTTGTTTTAGT	155001795	True	NA	24	True	AATATA	-22	NA	155003402	155004868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr7_+_155003709_155003961_155004135_155004340
transcript_134324.known	chr7	+	2256	1	FSM	ENSG00000273344.1	ENST00000608317.1	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGACCTGTGTGAGAGAACT	155001840	True	NA	26	True	AATAAA	-38	NA	155003447	155005703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155003400_155005700
transcript_134325.known	chr7	-	1624	1	FSM	ENSG00000273117.1	ENST00000609974.1	1624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTCTGACTCTGT	-155297519	False	NA	-5	True	AATAAA	-16	NA	155297541	155295917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155295900_155297500
transcript_134327.known	chr7	+	2908	6	FSM	ENSG00000186480.13	ENST00000340368.9	2908	6	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	39.1867324486235	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTATTTATGTTTGCT	155292160	True	NA	17	True	ATTAAA	-14	NA	155297877	155310235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155297960_155298258_155298698_155301565_155301691_155302250_155302418_155302746_155302847_155308240
transcript_134329.known	chr7	-	2977	7	FSM	ENSG00000283128.3	ENST00000635770.1	2977	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.8069099546056	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCTTGTATCTTGCAAATT	-155643916	True	NA	NA	False	ATTAAA	-4	NA	155644396	155501146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155503106_155507019_155507117_155508893_155509098_155545830_155545944_155576549_155576834_155643467_155643605_155644213
transcript_134332.known	chr7	-	2575	5	FSM	ENSG00000146910.14	ENST00000682997.2	2575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.87228132326901	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATATCTCATGACTT	NA	False	NA	NA	False	ATTAAA	-22	NA	155510162	155501128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155502876_155503020_155503106_155507019_155507117_155508893_155509098_155509720
transcript_134334.nic	chr7	-	699	4	ISM	ENSG00000146910.14	ENST00000682997.2	2575	5	193	1828	193	-943	5prime_fragment	FALSE	canonical	2	5	junction_2	1.4142135623731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACCGTGTTTGTCTCCGT	-155509851	True	NA	-3	True	AAGAAA	-17	NA	155509969	155502956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_155503106_155507019_155507117_155508893_155509098_155509720
transcript_134335.known	chr7	+	1580	7	FSM	ENSG00000184863.11	ENST00000392759.7	1580	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	90.2134813773541	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACGGAGACTTTTAATA	155636412	True	NA	NA	False	NA	NA	NA	155644701	155701490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155684932_155685053_155700772
transcript_134336.known	chr7	+	1404	6	FSM	ENSG00000184863.11	ENST00000287912.7	1404	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_5	11.2142766151009	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTGAGTCTGTGGC	155644265	True	NA	NA	False	AATAAA	-24	NA	155644450	155701183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_155644920_155665174_155665254_155672866_155672916_155678607_155678685_155680589_155680909_155700772
transcript_134339.nnic	chr7	-	916	4	NNC	ENSG00000216895.9	novel	1356	3	NA	NA	-213	279	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	19.1543438647449	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGTGCATACCTTT	-155644569	False	NA	NA	False	AATAAA	-16	NA	155644619	155641636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_155641825_155642785_155642971_155643467_155643605_155644213
transcript_134344.nnic	chr7	-	526	3	NNC	ENSG00000216895.9	novel	597	2	NA	NA	-8	279	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	23	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGTGGTGCATACCTTT	-155644364	False	NA	NA	False	AATAAA	-16	NA	155644414	155641636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_155641825_155643467_155643605_155644213
transcript_134345.nnic	chr7	-	593	3	NIC	ENSG00000216895.9	novel	1356	3	NA	NA	187	319	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	13	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTCCTTATCTATGAA	-155644140	False	NA	-12	True	AGTAAA	-13	NA	155644190	155642764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_155642971_155643467_155643605_155643940
transcript_134346.known	chr7	-	1356	3	FSM	ENSG00000216895.9	ENST00000460022.6	1356	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCGTCTCAGTAATGAT	-155643897	True	NA	-2	True	AATAAA	-16	NA	155644377	155641915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155642971_155643467_155643605_155644213
transcript_134349.nnic	chr7	-	511	3	NIC	ENSG00000216895.9	novel	1356	3	NA	NA	187	237	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	13	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCACTGGAAAAATTTTT	-155644140	False	NA	-2	True	TATAAA	-15	NA	155644190	155642846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_155642971_155643467_155643605_155643940
transcript_134352.known	chr7	-	597	2	FSM	ENSG00000216895.9	ENST00000469539.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCCTGGGTGACAGAGCG	-155643926	True	NA	NA	False	NA	NA	NA	155644406	155643200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_155643605_155644213
transcript_134355.known	chr7	-	750	5	FSM	ENSG00000182648.14	ENST00000656928.1	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6583123951777	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATAGTTACTACAATCAGA	-156639918	True	NA	NA	False	ATTAAA	-4	NA	156640562	156438723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156438996_156441229_156441381_156605187_156605381_156605657_156605765_156640535
transcript_134356.known	chr7	-	947	4	FSM	ENSG00000182648.14	ENST00000447933.7	957	4	10	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.942809041582063	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-156639923	True	NA	2	True	AATAAA	-36	NA	156640567	156472096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156472712_156605187_156605381_156605657_156605765_156640535
transcript_134357.known	chr7	-	640	4	FSM	ENSG00000182648.14	ENST00000418309.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATCATGCATTTTTATT	-156639937	True	NA	NA	False	ATTAAA	-17	NA	156640581	156603617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156603912_156605187_156605381_156605657_156605765_156640535
transcript_134358.nic	chr7	-	894	3	ISM	ENSG00000182648.14	ENST00000661595.1	2149	5	-54	33317	-22	0	5prime_fragment	FALSE	canonical	1	1	junction_2	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTTGTTCTATTATTTG	-156639977	True	NA	2	True	AATAAA	-36	NA	156640621	156472096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_156472712_156605187_156605381_156640535
transcript_134361.known	chr7	-	545	2	FSM	ENSG00000182648.14	ENST00000435354.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATGACAATTATTGTGTT	-156639919	True	NA	-8	True	AGTAAA	-20	NA	156640563	156639431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156639949_156640535
transcript_134362.known	chr7	-	2292	1	FSM	ENSG00000182648.14	ENST00000333319.6	2292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGAATTTTTTATTTT	NA	False	NA	2	True	AATAAA	-30	NA	156640654	156638362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156638400_156640700
transcript_134363.known	chr7	-	7950	17	FSM	ENSG00000105983.23	ENST00000353442.10	7950	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	69.6459797834735	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCACATCCCAATATATG	-156887838	True	NA	43	True	NA	NA	NA	156893183	156677790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_156684164_156688029_156688192_156724111_156724179_156725434_156725526_156725763_156725838_156727929_156728008_156728643_156728721_156734176_156734258_156756392_156756466_156762133_156762199_156763107_156763177_156763668_156763796_156796388_156796493_156826604_156826745_156833752_156833793_156836812_156836886_156892927
transcript_134365.known	chr7	+	1679	9	FSM	ENSG00000105982.17	ENST00000317955.10	1679	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.34877322383367	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAAATTTTAATGTCTTA	156640600	True	NA	NA	False	AATAAA	-42	NA	156640773	156677130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
transcript_134367.known	chr7	+	1893	9	FSM	ENSG00000105982.17	ENST00000432459.6	1893	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.34877322383367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGTGCAAATTTTAAT	156640573	True	NA	NA	False	AATAAA	-36	NA	156640746	156677124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156641005_156643800_156643893_156644498_156644758_156654575_156654719_156657540_156657574_156658127_156658253_156658461_156658571_156675695_156675864_156676418
transcript_134370.nic	chr7	+	824	4	ISM	ENSG00000105982.17	ENST00000317955.10	1679	9	-89	22209	11	0	5prime_fragment	FALSE	canonical	0	0	junction_1	7.36357401145817	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	156640511	True	NA	NA	False	ATTAAA	-21	NA	156640684	156654921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_+_156640812_156643800_156643893_156644498_156644758_156654575
transcript_134372.known	chr7	+	904	4	FSM	ENSG00000105982.17	ENST00000469382.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6.59966329107444	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTATTCTCAAGTACTAA	156640575	True	NA	NA	False	ATTAAA	-21	NA	156640748	156654921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156640956_156643800_156643893_156644498_156644758_156654575
transcript_134377.known	chr7	+	6082	11	FSM	ENSG00000146909.8	ENST00000275820.4	6082	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	9.73858305915188	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAGTAACAGTGAATGT	156946407	True	NA	10	True	AATAAA	-20	NA	156949711	156973176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_156950725_156952473_156952599_156954102_156954299_156959850_156960175_156962150_156962262_156963007_156963176_156963904_156964027_156966269_156966403_156966960_156967093_156969086_156969197_156969528
transcript_134379.known	chr7	+	465	1	FSM	ENSG00000225224.1	ENST00000429552.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGCGTATGAGTTAATAAAA	157192339	False	NA	NA	False	NA	NA	NA	157192367	157192832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_157192400_157192800
transcript_13438.nic	chr1	-	1968	9	ISM	ENSG00000162687.19	ENST00000609185.5	3622	27	-532	201151	-331	63252	5prime_fragment	TRUE	canonical	3	20	junction_5	2.93417364857638	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCTGAACATGGTATGTAA	-196608767	True	NA	NA	False	NA	NA	NA	196608891	196429009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_196429758_196465292_196465388_196467702_196467787_196468993_196469069_196479178_196479239_196482330_196482380_196489837_196489938_196492261_196492342_196608214
transcript_134385.known	chr7	+	2489	10	FSM	ENSG00000105993.15	ENST00000262177.9	2489	10	0	0	0	0	multi-exon	FALSE	canonical	3	1378	junction_8	856.898671567026	924	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGCCTGCTGTCCTTTGT	157327664	True	NA	103	True	AATAAA	-21	NA	157337003	157417439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_157337145_157358546_157358638_157363160_157363271_157366501_157366562_157367372_157367484_157382245_157382378_157384866_157385009_157385540_157385612_157409794_157410002_157416015
transcript_134386.known	chr7	+	1543	1	FSM	ENSG00000280266.1	ENST00000624122.1	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCCGCTCATTATGAGGG	NA	False	NA	NA	False	AATAAA	-18	NA	157525782	157527325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_157525800_157527300
transcript_134389.nic	chr7	-	2019	3	ISM	ENSG00000155093.19	ENST00000389416.8	4692	22	1018595	-5	52393	0	3prime_fragment	FALSE	canonical	3	25	junction_1	1	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGGTGGTCTTTATTTGG	-157569021	True	NA	1	True	ATTAAA	-15	NA	157569116	157539055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_157540786_157548945_157549020_157568901
transcript_134390.nic	chr7	-	562	3	ISM	ENSG00000155093.19	ENST00000648371.1	958	10	52393	176	52393	-176	internal_fragment	FALSE	canonical	3	25	junction_1	1	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACGGGTGGAGGGGAATC	-157569021	True	NA	0	True	AATAAA	-23	NA	157569116	157540512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_157540786_157548945_157549020_157568901
transcript_134395.known	chr7	-	4049	28	FSM	ENSG00000146918.20	ENST00000356309.8	4049	28	0	0	0	0	multi-exon	TRUE	canonical	3	550	junction_27	63.5442448711245	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTCTACCAAAAATACAAAAT	-158693610	True	NA	NA	False	NA	NA	NA	158704804	158631168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_134398.nic	chr7	-	3800	27	NIC	ENSG00000146918.20	novel	3957	29	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_4	119.502896649798	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693647	True	NA	-4	True	AATAAA	-12	NA	158704841	158631313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_134402.nnic	chr7	-	962	7	NNC	ENSG00000146918.20	novel	4049	28	NA	NA	-37	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	235.347084111956	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTATTTGAAAGTA	-158693647	True	NA	-1	True	AATAAA	-15	NA	158704841	158631310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr7_-_158631509_158689883_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158704723
transcript_134407.nic	chr7	-	504	4	ISM	ENSG00000146918.20	ENST00000409339.3	5253	28	-43	53081	-37	535	5prime_fragment	FALSE	canonical	3	550	junction_3	53.1057644914582	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCTACTGGAATGTG	-158693647	True	NA	NA	False	AATAAA	-16	NA	158704841	158692876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_158692957_158693308_158693498_158701821_158701939_158704723
transcript_134408.known	chr7	-	3957	29	FSM	ENSG00000146918.20	ENST00000409423.5	3957	29	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_28	156.934325923493	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCATTTGTTTATTTGAAA	-158693610	True	NA	-4	True	AATAAA	-12	NA	158704804	158631313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_158631718_158644288_158644389_158645518_158645620_158646459_158646564_158650831_158650973_158652292_158652481_158654594_158654695_158655117_158655259_158655338_158655456_158656259_158656434_158656551_158656706_158658337_158658409_158662193_158662368_158664183_158664297_158664527_158664751_158671513_158671667_158675476_158675657_158679959_158680086_158680720_158680817_158683299_158683387_158686171_158686242_158687347_158687443_158689818_158689954_158690567_158690723_158692841_158692957_158693308_158693498_158701821_158701939_158703649_158703703_158704723
transcript_134410.nic	chr7	-	422	3	ISM	ENSG00000146918.20	ENST00000409339.3	5253	28	-43	53515	-37	101	5prime_fragment	FALSE	canonical	3	550	junction_2	59.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAGTATTTGTTTTTCAA	-158693647	True	NA	-2	True	NA	NA	NA	158704841	158693310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr7_-_158693498_158701821_158701939_158704723
transcript_134412.known	chr7	+	3789	25	FSM	ENSG00000126870.16	ENST00000407559.8	3789	25	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_4	25.3950727941903	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTCTGCCAATAGTGTT	158856539	False	NA	6	True	ATTAAA	-20	NA	158856557	158946189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_+_158856751_158869854_158869909_158871141_158871563_158876608_158876692_158879683_158879990_158884563_158884620_158887020_158887076_158891264_158891334_158901738_158901817_158902375_158902596_158905988_158906092_158911549_158911680_158912984_158913097_158914232_158914322_158918739_158918870_158922376_158922550_158923570_158923734_158926186_158926301_158926401_158926464_158926991_158927044_158930454_158930516_158934128_158934229_158934417_158934550_158941924_158942149_158945580
transcript_134417.known	chr7	-	3854	13	FSM	ENSG00000106018.14	ENST00000262178.7	3854	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	8.71261856287891	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGAGTAAGAACTTGCTC	-159144028	True	NA	1	True	AATAAA	-20	NA	159144867	159028174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr7_-_159030790_159031827_159031870_159031937_159032068_159034212_159034305_159034580_159034651_159035951_159036013_159036751_159036903_159043034_159043177_159058480_159058579_159103756_159103855_159109811_159109920_159142445_159142546_159144720
transcript_13442.nnic	chr1	+	954	4	NNC	ENSG00000116785.15	novel	785	2	NA	NA	-3305	73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.24721912892465	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTTATCAATGAATTAGT	196786434	True	NA	NA	False	AATAAA	-19	NA	196786454	196793748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_196786611_196788215_196788399_196790044_196790228_196793316
transcript_134424.known	chr8	-	370	3	FSM	ENSG00000223508.5	ENST00000606507.1	370	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGCCTCTGACGGTTTT	-231996	True	NA	NA	False	AATAAA	-13	NA	232231	230007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_230171_230803_230908_232128
transcript_134426.known	chr8	-	736	3	FSM	ENSG00000223508.5	ENST00000606975.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATAAGAGTGACA	-231976	True	NA	NA	False	CATAAA	-8	NA	232211	213185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_213711_219289_219418_232128
transcript_134427.known	chr8	+	10356	10	FSM	ENSG00000147364.17	ENST00000350302.8	10356	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	12.2877033786216	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTTGTACTCGTTACTT	406109	True	NA	5	True	ATTAAA	-16	NA	406957	477967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_407067_413072_413214_431340_431445_432885_432936_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_134432.known	chr8	+	2360	9	FSM	ENSG00000147364.17	ENST00000352684.2	2360	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	21.821720830402	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATAGGACTAAAAAAAG	NA	False	NA	NA	False	AATAAA	-20	NA	406807	469871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_407067_413072_413214_431340_431445_435614_435708_449989_450084_451268_451454_458368_458552_463006_463151_468714
transcript_134440.known	chr8	-	630	1	FSM	ENSG00000272293.1	ENST00000607549.1	630	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACATCATTTTTGAGATA	-451331	False	NA	0	True	AATAAA	-28	NA	451343	450713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_450700_451300
transcript_134441.known	chr8	-	3088	3	FSM	ENSG00000180190.13	ENST00000324079.11	3088	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_1	28	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTATTGGTTTGCATG	-536401	True	NA	-9	True	AATAAA	-19	NA	544834	489945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_492745_494493_494598_544649
transcript_13445.known	chr1	-	6132	27	FSM	ENSG00000066279.19	ENST00000294732.11	6132	27	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_10	62.826943679213	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATATTATTCCTGTCTAT	-197142128	True	NA	NA	False	AATAAA	-19	NA	197146694	197084127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_197084427_197086802_197086973_197088255_197088433_197089929_197090085_197090195_197090389_197090849_197091042_197091906_197092057_197093051_197093262_197094083_197094181_197095997_197096165_197117788_197117984_197121914_197122044_197122158_197122302_197122387_197122596_197124109_197124332_197124869_197124956_197125045_197125192_197128489_197128666_197129186_197129318_197129914_197130057_197132284_197132353_197133349_197133596_197135095_197135243_197139766_197139872_197142330_197143811_197143956_197144101_197146140
transcript_134455.known	chr8	-	1798	6	FSM	ENSG00000104714.14	ENST00000262109.8	1798	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	52.7658980782096	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATAGTTGAGTTT	-726155	True	NA	NA	False	ATTAAA	-18	NA	731224	664199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_664677_668597_668793_673288_674048_692477_692613_715860_716008_731139
transcript_134470.nic	chr8	-	577	4	ISM	ENSG00000104714.14	ENST00000262109.8	1798	6	-27	9665	-27	0	5prime_fragment	FALSE	canonical	3	278	junction_1	35.5933826558939	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAACTGAAAAAGAAACAG	-726182	True	NA	NA	False	AATAAA	-5	NA	731251	673864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_674048_692477_692613_715860_716008_731139
transcript_13448.known	chr1	-	8595	11	FSM	ENSG00000177888.8	ENST00000367405.5	8595	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.3	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATATCTAGGTTTTA	-197200464	True	NA	NA	False	AATAAA	-22	NA	197201293	197153681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_197160015_197172159_197172249_197175009_197175116_197176563_197176671_197178416_197178513_197180987_197181118_197188291_197188440_197190761_197190832_197191691_197191900_197199353_197200591_197201222
transcript_134485.nnic	chr8	+	402	3	NNC	ENSG00000198010.13	novel	10418	15	NA	NA	8493	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATGCCTGTCTTTATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	891820	910575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_891978_907911_907967_910385
transcript_134486.nnic	chr8	+	617	3	NNC	ENSG00000198010.13	novel	10418	15	NA	NA	8434	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTTCTGCCTGAC	NA	False	NA	22	True	ATTAAA	-19	NA	891761	1032931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_891978_907911_907967_1032585
transcript_134488.known	chr8	+	1305	4	FSM	ENSG00000182372.10	ENST00000520991.3	1305	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	41.9867704031745	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGTCAGTTTAGCCGC	1761491	True	NA	21	True	AAGAAA	-25	NA	1763831	1780772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763886_1770931_1771598_1772923_1772986_1780249
transcript_13449.known	chr1	+	600	3	FSM	ENSG00000203724.11	ENST00000367393.8	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAACAAATGTTTGTGTGT	197902565	True	NA	NA	False	AATAAA	-9	NA	197902629	197907362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_197902914_197905795_197905898_197907148
transcript_134492.nnic	chr8	+	1879	4	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-68	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	53.8578375602536	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	NA	False	NA	20	True	AATAAA	-15	NA	1763691	1782742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_1763886_1770931_1771598_1780249_1780882_1782355
transcript_134495.known	chr8	+	1958	4	FSM	ENSG00000182372.10	ENST00000635970.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.8578375602536	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTTTACAGAACCCAAA	1761474	True	NA	-9	True	AATAAA	-6	NA	1763814	1782681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763886_1770931_1771598_1780249_1781145_1782355
transcript_134504.known	chr8	+	2001	4	FSM	ENSG00000182372.10	ENST00000637083.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	58.4541605780879	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTCTCTCAAAAAAAAAAAA	1761474	True	NA	NA	False	NA	NA	NA	1763814	1781357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763886_1765067_1765224_1770931_1771598_1780249
transcript_134509.nnic	chr8	+	748	3	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-68	61	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	50.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	NA	False	NA	20	True	AATAAA	-15	NA	1763691	1782742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_1763886_1770931_1771099_1782355
transcript_13451.known	chr1	+	394	3	FSM	ENSG00000203724.11	ENST00000436652.1	394	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTTTGTGTGTTTCTG	197902713	False	NA	NA	False	AATAAA	-14	NA	197902777	197907367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_197902851_197905795_197905898_197907148
transcript_134511.nnic	chr8	+	1009	3	NNC	ENSG00000182372.10	novel	1958	4	NA	NA	-68	61	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGTGAATGCTTTATCT	NA	False	NA	20	True	AATAAA	-15	NA	1763691	1782742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_1763886_1770931_1771360_1782355
transcript_134515.known	chr8	+	7084	3	FSM	ENSG00000182372.10	ENST00000331222.6	7084	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	11.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGTCTCTATTTCCTTTCT	1761448	True	NA	10	True	AATATA	-43	NA	1763788	1786570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763886_1770931_1771598_1780249
transcript_134519.known	chr8	+	1769	3	FSM	ENSG00000182372.10	ENST00000519254.2	1769	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	58.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATCGCACCACT	1761419	True	NA	NA	False	NA	NA	NA	1763759	1781300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763812_1770931_1771598_1780249
transcript_134523.known	chr8	+	1897	3	FSM	ENSG00000182372.10	ENST00000637156.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTCTCTCAAAAAAAAA	1761459	True	NA	NA	False	NA	NA	NA	1763799	1781354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763926_1770931_1771598_1780249
transcript_134525.known	chr8	+	1807	3	FSM	ENSG00000182372.10	ENST00000635751.1	1807	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	58	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACCTGTAATCCCAGC	1761436	True	NA	NA	False	ACTAAA	-28	NA	1763776	1781225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_1763942_1770931_1771598_1780249
transcript_134533.known	chr8	-	579	2	FSM	ENSG00000253982.3	ENST00000518481.2	621	2	42	0	36	0	multi-exon	FALSE	canonical	3	99	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACATGTGGGAAAACGTTG	-1763285	False	NA	-20	True	AATAAA	-27	NA	1763297	1762624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_1762929_1763022
transcript_134534.known	chr8	-	978	2	FSM	ENSG00000253982.3	ENST00000518822.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGACTGCCTTTGTAG	-1764327	False	NA	NA	False	AAGAAA	-43	NA	1764339	1761989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_1762929_1764300
transcript_134535.known	chr8	-	917	2	FSM	ENSG00000253982.3	ENST00000517959.1	917	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCCTTGTTCATTCCTG	-1764490	True	NA	NA	False	NA	NA	NA	1764502	1762080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_1762929_1764433
transcript_134536.nnic	chr8	+	643	2	NIC	ENSG00000176595.4	novel	6911	2	NA	NA	196	-30458	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCATGTCTTATGTGC	1973536	True	NA	NA	False	AATAAA	-21	NA	1973872	1976478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_1973936_1975898
transcript_134538.known	chr8	+	8008	14	FSM	ENSG00000147316.15	ENST00000344683.10	8008	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	45.272612774785	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCAGTCTCACTCTGGAA	6404369	True	NA	NA	False	AATAAA	-27	NA	6406626	6648508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392_6445548_6455142_6455253_6477593_6477632_6480713_6480877_6499851_6499930_6621453_6621692_6642993
transcript_134539.known	chr8	+	3773	8	FSM	ENSG00000147316.15	ENST00000519480.6	3773	8	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	19.9407284987591	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTACTTGTTGCTGTTGT	6404334	True	NA	27	True	AATAAA	-31	NA	6406591	6447419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6406690_6409278_6409371_6414764_6414884_6431498_6431587_6436047_6436163_6438952_6439097_6442066_6442157_6444392
transcript_134549.nnic	chr8	-	500	3	NNC	ENSG00000246089.4	novel	2415	2	NA	NA	0	491	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	14	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	-6405515	True	NA	-4	True	ATTAAA	-19	NA	6406548	6404914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6405121_6405705_6405875_6406423
transcript_134552.nnic	chr8	-	767	3	NNC	ENSG00000246089.4	novel	2415	2	NA	NA	-331	491	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	14.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	-6407453	True	NA	-4	True	ATTAAA	-19	NA	6407473	6404914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6405121_6405705_6405875_6407081
transcript_134553.nnic	chr8	-	1260	3	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	-327	491	combination_of_known_splicesites	FALSE	canonical	3	5	junction_2	12	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	-6407449	True	NA	-4	True	ATTAAA	-19	NA	6407469	6404914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6405121_6405705_6406372_6407081
transcript_134554.nnic	chr8	-	1080	2	NNC	ENSG00000246089.4	novel	2415	2	NA	NA	0	491	intron_retention	FALSE	canonical	3	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	-6405515	True	NA	-4	True	ATTAAA	-19	NA	6406548	6404914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6405121_6405674
transcript_134555.known	chr8	-	2413	2	FSM	ENSG00000246089.4	ENST00000500118.3	2415	2	2	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGGGAGATTTTGGAG	-6405515	True	NA	NA	False	AATAAA	-25	NA	6406548	6403550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6405121_6405705
transcript_134556.nnic	chr8	-	621	2	NIC	ENSG00000246089.4	novel	2415	2	NA	NA	-354	491	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTTCCTTTGTGCTTA	NA	False	NA	-4	True	ATTAAA	-19	NA	6407496	6404914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6405121_6407081
transcript_134557.nic	chr8	-	1047	2	ISM	ENSG00000246089.4	ENST00000523225.1	1017	3	534	-191	-30	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6406588	False	NA	-3	True	AATAAA	-15	NA	6406608	6405405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_6406372_6406527
transcript_134558.nnic	chr8	-	1121	2	NIC	ENSG00000246089.4	novel	1017	3	NA	NA	-94	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6407216	False	NA	-3	True	AATAAA	-15	NA	6407236	6405405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6406372_6407081
transcript_134559.known	chr8	-	1137	1	FSM	ENSG00000246089.4	ENST00000606853.1	1137	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	311	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTGTTATGGTTTACTT	-6405509	True	NA	-3	True	AATAAA	-15	NA	6406542	6405405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6405400_6406500
transcript_134571.known	chr8	-	1198	3	FSM	ENSG00000249898.9	ENST00000527490.2	1198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAATCAGGCGGAGGCTA	-6707678	True	NA	NA	False	AAAACA	-45	NA	6708224	6627021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6627311_6634594_6635420_6708140
transcript_134572.nnic	chr8	-	506	3	NNC	ENSG00000249898.9	novel	1198	3	NA	NA	-47	1033	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTGTCTTTTCATAA	-6708208	False	NA	-4	True	AATAAA	-18	NA	6708271	6625567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6625783_6627150_6627311_6708140
transcript_134573.nnic	chr8	-	414	3	NNC	ENSG00000249898.9	novel	1198	3	NA	NA	-2	677	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCAGAGAGGTTCCTAG	-6707673	True	NA	NA	False	AATAAA	-20	NA	6708219	6625923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6626099_6627150_6627311_6708140
transcript_134574.nnic	chr8	-	1184	3	NIC	ENSG00000249898.9	novel	3652	5	NA	NA	-16	122	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	4	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAACAAAAAAACCA	-6707694	True	NA	82	True	NA	NA	NA	6708240	6626478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_6627311_6669988_6670241_6708140
transcript_134575.nic	chr8	-	967	2	FSM	ENSG00000249898.9	ENST00000692160.1	787	2	-54	-126	-47	126	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAACAAAAAAACCAAACA	-6708208	False	NA	86	True	NA	NA	NA	6708271	6626474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6627311_6708140
transcript_134579.known	chr8	-	3024	2	FSM	ENSG00000249898.9	ENST00000670222.1	3024	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGATTTATCTTGTATA	-6707670	True	NA	NA	False	NA	NA	NA	6708216	6667292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6670241_6708140
transcript_134580.nnic	chr8	-	1134	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	0	-20633	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATGCTTGAGTCTTC	-6707671	True	NA	0	True	ATTAAA	-30	NA	6708217	6687925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6688983_6708140
transcript_134581.nnic	chr8	-	1046	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	0	-20721	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTCTAAATTTAAAGTA	-6707671	True	NA	-88	True	AATAAA	-23	NA	6708217	6688013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6688983_6708140
transcript_134582.nnic	chr8	-	403	2	NNC	ENSG00000249898.9	novel	2490	5	NA	NA	0	-21364	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCTCTCTCTGTCACTC	-6707671	True	NA	NA	False	NA	NA	NA	6708217	6688656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_6688983_6708140
transcript_134584.known	chr8	+	5237	8	FSM	ENSG00000155189.12	ENST00000285518.11	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_2	53.0575351935644	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGTGATAAAAAGTTATTT	6706906	True	NA	13	True	AATAAA	-22	NA	6708641	6761503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6708888_6724869_6724940_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_134590.known	chr8	+	2525	7	FSM	ENSG00000155189.12	ENST00000523234.5	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	326.565673163743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATACCAGTTGGATC	6706930	True	NA	NA	False	AATATA	-14	NA	6708665	6758885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6708888_6730710_6730827_6732560_6732651_6741660_6741752_6747669_6747829_6755050_6755175_6757162
transcript_134595.known	chr8	+	852	3	FSM	ENSG00000155189.12	ENST00000518327.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	414.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGCTGCATTTTTGAGC	6708582	True	NA	NA	False	NA	NA	NA	6708692	6757695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6708888_6755050_6755175_6757162
transcript_134597.nic	chr8	+	322	2	ISM	ENSG00000155189.12	ENST00000285518.11	5237	8	-38	36596	-38	-5836	5prime_fragment	FALSE	canonical	3	958	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATATATTTAGCAAATC	6701023	False	NA	NA	False	AATAAA	-6	NA	6708603	6724907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_6708888_6724869
transcript_134600.known	chr8	-	4773	7	FSM	ENSG00000275591.5	ENST00000618742.3	4773	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	3.02305952453618	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGCTGAGCACCTATCA	-6834889	True	NA	NA	False	AATAAA	-20	NA	6835524	6808516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6812340_6815806_6815919_6821868_6822039_6823520_6823731_6825164_6825350_6832716_6832901_6835435
transcript_134609.known	chr8	+	1129	3	FSM	ENSG00000245857.3	ENST00000500823.3	1129	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCAGAAATTCTTATTTTC	6835420	False	NA	NA	False	TATAAA	-18	NA	6835534	6842457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_6835618_6835965_6836222_6841667
transcript_134610.known	chr8	-	465	2	FSM	ENSG00000164822.5	ENST00000297436.3	465	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTTGTGTTTGTGCTT	NA	False	NA	NA	False	AATAAA	-14	NA	6926076	6924696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_6924928_6925842
transcript_134614.nnic	chr8	-	680	2	Genic_Genomic	ENSG00000284614.1	novel	218	1	NA	NA	-150	6174	multi-exon	FALSE	canonical	2	16	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAACAATTATT	-7221914	False	NA	NA	False	AATAAA	-26	NA	7222080	7215538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_7215851_7221712
transcript_134615.known	chr8	-	337	2	FSM	ENSG00000177257.3	ENST00000318157.3	337	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATCCTAGTAATTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	7416863	7414854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_7415098_7416769
transcript_134617.nnic	chr8	-	686	2	Genic_Genomic	ENSG00000284655.1	novel	218	1	NA	NA	-144	6186	multi-exon	FALSE	canonical	3	21	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTATTTTTGTAAAGAGA	-7680548	True	NA	NA	False	AATAAA	-38	NA	7680670	7674122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_7674447_7680308
transcript_134618.known	chr8	+	337	2	FSM	ENSG00000171711.3	ENST00000302247.3	337	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATCCTAGTAATTGTG	NA	False	NA	NA	False	ATTAAA	-24	NA	7894676	7896716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_7894771_7896473
transcript_134623.nnic	chr8	+	538	2	NNC	ENSG00000284606.1	novel	3196	4	NA	NA	-259	-119858	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAAAAAAAGGC	NA	False	NA	NA	False	NA	NA	NA	8059312	8060669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8059675_8060493
transcript_134624.nnic	chr8	+	844	3	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-149	-108506	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	2.5	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	8065473	False	NA	NA	False	AATAAA	-41	NA	8065496	8072021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8065817_8070775_8070973_8071694
transcript_134625.nnic	chr8	+	627	2	NNC	ENSG00000284606.1	novel	3297	4	NA	NA	-151	-108528	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	0	145	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	8065471	False	NA	NA	False	AATAAA	-19	NA	8065494	8071999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_8065817_8071694
transcript_134641.known	chr8	+	1409	9	FSM	ENSG00000173295.9	ENST00000522601.5	1409	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.056672193748	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCGTGTTGTCTGTTGGC	8228362	True	NA	16	True	ATTAAA	-19	NA	8228594	8244865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_8228701_8230842_8230906_8232793_8232875_8234482_8234585_8235815_8235950_8236031_8236300_8237125_8237276_8244098_8244323_8244584
transcript_134642.known	chr8	-	4845	6	FSM	ENSG00000275342.5	ENST00000615670.5	4845	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.19523539268061	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAGCTCTTTATCCTTAA	-8385987	True	NA	-20	True	ATTAAA	-23	NA	8386439	8317735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_8319303_8327709_8328462_8339477_8339636_8376246_8378079_8381417_8381835_8386320
transcript_134644.known	chr8	-	6399	3	FSM	ENSG00000147324.11	ENST00000276282.7	6399	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	8.5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTATTCCCAGAACTT	-8891856	True	NA	-20	True	AATAAA	-21	NA	8893630	8783353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_8786056_8797364_8797492_8890060
transcript_134645.known	chr8	-	286	1	FSM	ENSG00000270966.1	ENST00000603391.1	286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTCTATCACCTTACTA	NA	False	NA	NA	False	NA	NA	NA	8934006	8933720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_8933700_8934000
transcript_134646.known	chr8	+	4521	7	FSM	ENSG00000104626.15	ENST00000250263.8	4521	7	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_6	12.1209185570511	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTCTCATTTGTTTT	8999662	True	NA	8	True	AATAAA	-14	NA	9002896	9033338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9003172_9007969_9008149_9011541_9011753_9016321_9016406_9018296_9018407_9020349_9020465_9029791
transcript_134647.known	chr8	-	5510	2	FSM	ENSG00000173281.5	ENST00000310455.4	5510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAAGTGTCCTTCTATTC	-9148777	False	1881	NA	False	AATAAA	-17	NA	9150658	9136254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9141669_9150562
transcript_134648.known	chr8	-	2334	2	FSM	ENSG00000173281.5	ENST00000519699.1	2334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAAAAAAGAGAATTTT	-9149693	True	NA	NA	False	NA	NA	NA	9151574	9139562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9141669_9151346
transcript_134655.known	chr8	+	1038	6	FSM	ENSG00000248538.9	ENST00000650612.1	1038	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTGTGGATGTTTGGC	9151767	True	NA	10	True	AATAAA	-26	NA	9151783	9202858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9151917_9156151_9156305_9156773_9156848_9189347_9189598_9198923_9198992_9202498
transcript_134659.nnic	chr8	+	1242	5	NNC	ENSG00000248538.9	novel	826	4	NA	NA	-5	2252	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.87386354243376	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGCATTTGTTATAAAGGCT	NA	False	NA	NA	False	AATAAA	-16	NA	9151689	9158621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_9151917_9154965_9155150_9156151_9156305_9156770_9156848_9158020
transcript_134672.nic	chr8	+	890	4	NIC	ENSG00000248538.9	novel	622	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	1.4142135623731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCAGTGTGGATGTTTGGC	9188192	True	NA	10	True	AATAAA	-26	NA	9188220	9202858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_9188444_9189347_9189587_9198923_9198992_9202498
transcript_134676.known	chr8	+	439	3	FSM	ENSG00000248538.9	ENST00000521718.3	550	3	104	7	8	-1	multi-exon	FALSE	canonical	3	16	junction_2	1	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGGAAATCATAAGG	9151783	False	NA	NA	False	AATAAA	-20	NA	9151799	9156362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9151917_9154965_9155077_9156151
transcript_134678.nic	chr8	+	619	3	ISM	ENSG00000248538.9	ENST00000517816.1	826	4	-102	11777	-5	0	5prime_fragment	FALSE	canonical	2	5	junction_2	6.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCTTAAGGAAATCATA	NA	False	NA	NA	False	AATAAA	-17	NA	9151689	9156359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_9151917_9154965_9155150_9156151
transcript_134680.known	chr8	+	819	3	FSM	ENSG00000248538.9	ENST00000649837.1	819	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATACCTGGTGTTTT	9188222	True	NA	NA	False	AATAAA	-19	NA	9188250	9193796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9188444_9189347_9189587_9193409
transcript_134682.nnic	chr8	-	655	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-881	12200	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	143.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTTATGTTTAAAAGAA	-9180731	True	NA	NA	False	AATAAA	-23	NA	9183400	9168050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_9168615_9182463_9182516_9183361
transcript_134684.nnic	chr8	-	492	3	NNC	ENSG00000253252.2	novel	328	2	NA	NA	-881	12037	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	143.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTAGTGATTTGTTGAC	-9180731	True	NA	36	True	ATTAAA	-16	NA	9183400	9168213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_9168615_9182463_9182516_9183361
transcript_134687.nic	chr8	+	433	2	ISM	ENSG00000248538.9	ENST00000647722.1	1542	7	-76	46265	0	0	5prime_fragment	FALSE	canonical	2	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAAGGAAATCATAAGGA	NA	False	NA	NA	False	AATAAA	-21	NA	9151695	9156363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_9151917_9156151
transcript_134688.known	chr8	+	636	4	FSM	ENSG00000248538.9	ENST00000518496.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.54247233265651	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTTAAGGAAATCATAAGGA	NA	False	NA	NA	False	AATAAA	-21	NA	9151741	9156363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9151917_9154205_9154344_9154965_9155077_9156151
transcript_134689.known	chr8	+	349	2	FSM	ENSG00000248538.9	ENST00000648549.1	349	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCTTAAGGAAATCATA	9154992	False	NA	NA	False	AATAAA	-17	NA	9155008	9156359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_9155150_9156151
transcript_134692.known	chr8	-	328	2	FSM	ENSG00000253252.2	ENST00000521298.2	328	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTAGGAAGTCATCAAAAT	-9182480	False	NA	-4	True	AATAAA	-25	NA	9182519	9180250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9180523_9182463
transcript_134696.known	chr8	-	2903	3	FSM	ENSG00000253230.10	ENST00000665174.1	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	72.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900199_9900554_9900613_9900688
transcript_134697.known	chr8	-	3001	3	FSM	ENSG00000253230.10	ENST00000519461.2	3001	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	66.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9903356	False	NA	-20	True	AATAAA	-16	NA	9903398	9900063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900287_9900544_9900613_9900688
transcript_134698.nic	chr8	-	549	3	FSM	ENSG00000253230.10	ENST00000689122.1	464	3	-85	0	-85	0	multi-exon	FALSE	canonical	0	0	junction_2	65.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCATCTACAATTCTTTC	-9901810	True	NA	-20	True	AATAAA	-16	NA	9904337	9900063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9900287_9900554_9900613_9904069
transcript_134701.known	chr8	-	716	4	FSM	ENSG00000253230.10	ENST00000521242.1	716	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTTCACAGCGGACCTT	-9905324	False	579	NA	False	NA	NA	NA	9905366	9903460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9903754_9904069_9904188_9904531_9904629_9905158
transcript_134706.nnic	chr8	+	866	7	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1294	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.7366487830285	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	10057365	True	NA	NA	False	AGTAAA	-16	NA	10057675	10428365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10069487_10069627_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_134707.nnic	chr8	+	1386	7	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1294	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	12.7366487830285	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	10057365	True	NA	6	True	AATAAA	-18	NA	10057675	10428885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10069487_10069627_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_134709.known	chr8	+	1512	6	FSM	ENSG00000175806.15	ENST00000317173.9	1512	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.71293199325011	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTGACATCTCCTCTGT	10053865	True	NA	12	True	AATAAA	-24	NA	10054291	10428891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_10054659_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_134711.nnic	chr8	+	793	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1360	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.1508620323596	88	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAATGCTTGTGTGAT	10057569	False	NA	NA	False	AGTAAA	-16	NA	10057609	10428365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_134712.nnic	chr8	+	1313	6	NNC	ENSG00000175806.15	novel	559	3	NA	NA	-1360	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	10.1508620323596	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAACTGCCTGACATCTC	10057569	False	NA	6	True	AATAAA	-18	NA	10057609	10428885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_10057784_10207832_10207902_10245103_10245224_10301533_10301639_10319882_10319990_10428147
transcript_134718.known	chr8	-	2946	3	FSM	ENSG00000286622.1	ENST00000659604.1	2946	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTATATATGTTCAGCTT	-10054944	False	97	NA	False	NA	NA	NA	10055041	9984003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_9986762_9990625_9990698_10054925
transcript_134725.known	chr8	-	610	7	FSM	ENSG00000254093.9	ENST00000524114.5	610	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	82.2936814099357	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAACAAGCCCCAGGTT	-10833388	False	NA	NA	False	NA	NA	NA	10839771	10765822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839707
transcript_134726.known	chr8	-	1546	7	FSM	ENSG00000254093.9	ENST00000314787.8	1546	7	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_2	27.697272228306	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGATTCAGATTGTTCT	-10833492	True	NA	-6	True	ATTAAA	-17	NA	10839875	10764960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_10765917_10820192_10820270_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_134734.known	chr8	-	1272	6	FSM	ENSG00000254093.9	ENST00000519088.5	1272	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	77.7395652161755	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTCAGCAAGAGAGTTT	-10833493	True	NA	-10	True	AATAAA	-19	NA	10839876	10765158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_10765917_10826151_10826245_10831664_10831744_10832891_10832985_10834665_10834776_10839737
transcript_134739.nnic	chr8	+	1332	4	Antisense	novelGene_ENSG00000280294.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	3.39934634239519	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGTGAGGATACGAACAACA	10850630	True	NA	4	True	AATAAA	-27	NA	10850660	10858107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_10850732_10856215_10856304_10856456_10856580_10857057
transcript_134743.nnic	chr8	-	1315	4	NNC	ENSG00000171044.11	novel	728	3	NA	NA	430	622	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	18.5172592164415	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAGAAA	-11200381	False	NA	NA	False	ACTAAA	-11	NA	11200404	11111022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11114020_11114093_11195090_11195222_11200162
transcript_134744.nnic	chr8	-	756	4	NNC	ENSG00000171044.11	novel	728	3	NA	NA	430	-86	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	5.79271573232759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	-11200381	False	NA	-9	True	ATTAAA	-21	NA	11200404	11111730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113871_11114093_11195090_11195222_11200162
transcript_134751.nnic	chr8	-	1433	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	331	623	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAATAGAAAA	-11200480	False	NA	NA	False	ACTAAA	-12	NA	11200503	11111021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113871_11114093_11200162
transcript_134752.nnic	chr8	-	1180	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	434	622	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	13	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAATAGAAA	-11200377	False	NA	NA	False	ACTAAA	-11	NA	11200400	11111022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11114020_11114093_11200162
transcript_134754.nnic	chr8	-	625	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	430	-86	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	1.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	-11200381	False	NA	-9	True	ATTAAA	-21	NA	11200404	11111730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113871_11114093_11200162
transcript_134755.known	chr8	-	728	3	FSM	ENSG00000171044.11	ENST00000529336.1	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGTTTTGGGGTTCTTATG	-11200811	False	433	77	True	NA	NA	NA	11200834	11111644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11111893_11113871_11114093_11200575
transcript_134756.nnic	chr8	-	470	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	477	-86	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	11.5	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	-11200334	False	433	-9	True	ATTAAA	-21	NA	11200357	11111730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11113979_11114093_11200162
transcript_134757.nnic	chr8	-	575	3	NNC	ENSG00000171044.11	novel	728	3	NA	NA	331	-86	at_least_one_novel_splicesite	FALSE	canonical	2	25	junction_2	13	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTACTTCTGGGTT	-11200480	False	NA	-9	True	ATTAAA	-21	NA	11200503	11111730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11111893_11114020_11114093_11200162
transcript_134758.known	chr8	+	7081	10	FSM	ENSG00000104643.10	ENST00000221086.8	7081	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_9	15.8939385915077	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGGCTTATTTGAATT	11283728	True	NA	21	True	AATAAA	-33	NA	11284815	11328146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11285071_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_134761.known	chr8	+	1960	10	FSM	ENSG00000104643.10	ENST00000526292.1	1960	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	36.9327049017267	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCCATTTGTGTTTCATG	11284006	False	NA	-2	True	AATAGA	-11	NA	11285093	11323057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11285317_11295193_11295303_11300022_11300149_11304840_11305015_11306189_11306408_11309526_11309689_11314922_11315065_11316672_11316894_11319686_11319839_11322624
transcript_134763.known	chr8	-	1588	1	FSM	ENSG00000280273.2	ENST00000638924.1	1588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTACCAACTTTCCTTGG	-11285000	True	NA	3	True	AATAAA	-37	NA	11285068	11283480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11283500_11285100
transcript_134767.known	chr8	+	1421	8	FSM	ENSG00000154316.16	ENST00000534302.5	1421	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.88441513689613	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	11347530	True	NA	6	True	ATTAAA	-17	NA	11347644	11366088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11361634_11361808_11364719_11364990_11365582
transcript_134770.nnic	chr8	+	1280	7	NIC	ENSG00000154316.16	novel	1421	8	NA	NA	-32	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	2.03442593595562	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTAAGACTCGATTATTC	11347498	True	NA	6	True	ATTAAA	-17	NA	11347612	11366088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_11347706_11355068_11355179_11356104_11356292_11358135_11358179_11359213_11359285_11364719_11364990_11365582
transcript_134772.nnic	chr8	-	1086	3	NNC	ENSG00000255020.1	novel	1099	2	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCTTGCCCTTGAAT	-11347479	True	NA	NA	False	AATAAA	-15	NA	11347543	11345747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_11345876_11345929_11346641_11347296
transcript_134773.known	chr8	-	1099	2	FSM	ENSG00000255020.1	ENST00000525867.1	1099	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGGCTTGCCCTTGAAT	-11347438	True	NA	NA	False	AATAAA	-15	NA	11347502	11345747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11346641_11347296
transcript_134774.known	chr8	+	2323	6	FSM	ENSG00000154328.16	ENST00000455213.6	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	66.1350134195193	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCTGTTTTTGTCTTTAT	11768232	True	NA	12	True	AATAAA	-12	NA	11769698	11787340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11769792_11770173_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_134775.known	chr8	+	2226	5	FSM	ENSG00000154328.16	ENST00000436750.7	2226	5	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_1	41.105808591974	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	NA	False	NA	17	True	AATAAA	-17	NA	11769638	11787345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11769792_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_134776.known	chr8	+	2699	5	FSM	ENSG00000154328.16	ENST00000284503.7	2699	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	40.7246853885945	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768243	True	NA	17	True	AATAAA	-17	NA	11769709	11787345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11770336_11771445_11771586_11779597_11779951_11783202_11783400_11785962
transcript_134777.known	chr8	+	2016	4	FSM	ENSG00000154328.16	ENST00000403422.7	2016	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	91.1604202613295	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTGTCTTTATTTGGT	11768242	True	NA	17	True	AATAAA	-17	NA	11769708	11787345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11769792_11779597_11779951_11783202_11783400_11785962
transcript_134779.known	chr8	+	1773	9	FSM	ENSG00000079459.13	ENST00000525607.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1690.16707753997	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCTCATGGCAGAGCA	11757494	True	NA	NA	False	NA	NA	NA	11802740	11838839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11803321_11803519_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_13478.nnic	chr1	-	632	3	NNC	ENSG00000203721.8	novel	1186	5	NA	NA	-5	30946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAACTCTATAAGGTAAG	-200373862	True	NA	NA	False	TATAAA	-16	NA	200374148	200311594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_200312016_200373092_200373170_200374014
transcript_13479.nnic	chr1	-	560	3	NNC	ENSG00000203721.8	novel	1186	5	NA	NA	-5	30874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATATGTGTTCACTGTGT	-200373862	True	NA	NA	False	NA	NA	NA	200374148	200311666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_200312016_200373092_200373170_200374014
transcript_13480.nnic	chr1	-	426	3	FSM	ENSG00000203721.8	ENST00000688178.1	408	3	-17	-1	-5	-1	multi-exon	FALSE	canonical	1	1	junction_1	4.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTTTTCTTTT	-200373862	True	NA	NA	False	AATAAA	-17	NA	200374148	200342542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200342758_200373092_200373170_200374014
transcript_134813.known	chr8	+	1558	5	FSM	ENSG00000079459.13	ENST00000446331.6	1558	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1729.16907429551	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGCTTTTGACCTTTTA	11802620	False	NA	43	True	TTTAAA	-29	NA	11802642	11839210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802911_11826078_11826216_11830243_11830421_11831517_11831671_11838387
transcript_134859.known	chr8	+	642	2	FSM	ENSG00000079459.13	ENST00000527045.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTTTGTCCCCAGTA	11757537	True	NA	-15	True	AATAAA	-3	NA	11802783	11803815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11803321
transcript_134861.known	chr8	+	2035	8	FSM	ENSG00000079459.13	ENST00000220584.9	2035	8	0	0	0	0	multi-exon	FALSE	canonical	3	3358	junction_3	338.434812702505	4464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCAAGTACAGTTCGCT	11757494	True	NA	11	True	AATAAA	-19	NA	11802740	11839298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_134862.known	chr8	+	1393	7	FSM	ENSG00000079459.13	ENST00000443614.6	1393	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_3	1498.91976844067	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGGTGCCTCATCCCA	11757492	True	NA	147	True	NA	NA	NA	11802738	11838783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802932_11808793_11808892_11809666_11809851_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_134863.known	chr8	+	1596	8	FSM	ENSG00000079459.13	ENST00000525900.5	1596	8	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	1313.43512848359	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATCCTACTTAGTATGAT	11757519	True	NA	-42	True	NA	NA	NA	11802765	11838905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_11802911_11808793_11808892_11809666_11809851_11821749_11821879_11826023_11826216_11830243_11830421_11831517_11831671_11838387
transcript_134864.known	chr8	-	1553	12	FSM	ENSG00000164733.22	ENST00000526481.7	1553	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	178.096129674282	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTGATTCATTCCATG	-11862806	True	NA	-3	True	AATAAA	-19	NA	11868079	11842523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11842683_11844014_11844242_11845081_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_134865.known	chr8	-	2039	11	FSM	ENSG00000164733.22	ENST00000345125.8	2039	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	181.977031517717	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTTTTCTCCAACTTG	-11862817	True	NA	-32	True	NA	NA	NA	11868090	11844339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11861360_11861480_11868000
transcript_134866.known	chr8	-	2254	11	FSM	ENSG00000164733.22	ENST00000679051.1	2254	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	180.566580518101	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGGTAAGCTTGCCCTT	-11862841	True	NA	-55	True	NA	NA	NA	11868114	11844103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11861405_11861480_11868000
transcript_134867.known	chr8	-	1802	11	FSM	ENSG00000164733.22	ENST00000527243.6	1802	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	185.676735214727	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAACCTCTCTGATCTTGTG	-11862853	True	NA	NA	False	NA	NA	NA	11868126	11844627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11862344_11862479_11868000
transcript_134868.known	chr8	-	3835	11	FSM	ENSG00000164733.22	ENST00000678242.1	3835	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_10	177.235323792973	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCATAACCTCAATAAAGT	-11862864	True	NA	-39	True	NA	NA	NA	11868137	11842559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847823_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_134869.known	chr8	-	1913	10	FSM	ENSG00000164733.22	ENST00000679214.1	1913	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.403130237061	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACTTGAAGTCTACTCT	-11862806	True	NA	-21	True	AATAAA	-8	NA	11868079	11844328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11847678_11847816_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_134870.known	chr8	-	3128	9	FSM	ENSG00000164733.22	ENST00000677047.1	3128	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	149.381851307312	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTGCAGTGAGCCAAGA	-11862863	True	NA	NA	False	NA	NA	NA	11868136	11843033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11868000
transcript_134872.known	chr8	-	1875	10	FSM	ENSG00000164733.22	ENST00000524500.6	1875	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	212.067657501149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTGTGCCAATAAAAGTT	-11862840	True	NA	-44	True	NA	NA	NA	11868113	11844351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_11845223_11845660_11845790_11847051_11847169_11848066_11848153_11849045_11849165_11850865_11850981_11852609_11852696_11853328_11853480_11864375_11864464_11868000
transcript_134875.known	chr8	-	3141	2	FSM	ENSG00000284610.1	ENST00000641966.1	3141	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAATAGAAGAAATATTTGA	NA	False	NA	NA	False	AATATA	-35	NA	12015193	12006187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12008966_12014830
transcript_134896.known	chr8	-	2254	6	FSM	ENSG00000186523.15	ENST00000534187.6	2254	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.1223227551278	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-12194092	True	NA	NA	False	AATAAA	-17	NA	12194105	12182109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193876
transcript_134899.known	chr8	-	2145	6	FSM	ENSG00000186523.15	ENST00000340537.9	2145	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	11.499565209172	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTACAGATGATCTGTGG	-12194069	True	NA	NA	False	AATAAA	-29	NA	12194082	12182097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_12183707_12185375_12185526_12186699_12186834_12189807_12189889_12191778_12191842_12193974
transcript_134909.known	chr8	+	1361	2	FSM	ENSG00000255495.1	ENST00000528514.1	1361	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATAGCTATTGTCTTTC	12194120	False	NA	NA	False	GATAAA	-25	NA	12194466	12196280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_12195438_12195890
transcript_134913.known	chr8	-	806	6	NIC	ENSG00000145002.13	novel	953	7	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	12.1424873893284	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAAAACTGCCCTCTAAT	-12436280	False	NA	NA	False	ATTAAA	-13	NA	12436298	12425760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_12425990_12427656_12427807_12428980_12429115_12432081_12432163_12434051_12434115_12436149
transcript_134944.nnic	chr8	-	834	4	Fusion	ENSG00000284613.1_ENSG00000283674.3	novel	701	2	NA	NA	-35	0	multi-exon	FALSE	canonical	1	2	junction_2	15.121728296285	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGTCCTGGCTGCA	-12664963	True	NA	0	True	TATAAA	-22	NA	12665623	12626391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr8_-_12626571_12659129_12659371_12659761_12659830_12665277
transcript_134946.nic	chr8	-	884	3	ISM	ENSG00000283674.3	ENST00000637678.1	1770	6	63997	0	4209	0	3prime_fragment	FALSE	canonical	1	2	junction_1	5.5	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTTGTAAAGAGAATG	-12601230	True	NA	NA	False	AATAAA	-41	NA	12601517	12594969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_12595297_12596017_12596215_12601157
transcript_134951.nic	chr8	-	674	2	ISM	ENSG00000283674.3	ENST00000636622.1	1014	6	4207	0	4207	0	3prime_fragment	FALSE	canonical	3	72	junction_1	0	387	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAATAATTATT	-12601232	True	NA	NA	False	AATAAA	-26	NA	12601519	12594984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_12595297_12601157
transcript_134952.nnic	chr8	-	1222	2	NNC	ENSG00000283674.3	novel	4514	6	NA	NA	7	-11309	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCAGT	NA	False	NA	NA	False	NA	NA	NA	12607653	12606293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_12607153_12607290
transcript_134959.known	chr8	+	1420	1	FSM	ENSG00000164743.5	ENST00000297324.5	1420	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGGCTCTGACTTGTGCG	13566758	True	NA	NA	False	AATAAA	-22	NA	13566868	13568288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_13566900_13568300
transcript_134968.known	chr8	+	3683	10	FSM	ENSG00000104723.21	ENST00000382020.8	3683	10	0	0	0	0	multi-exon	TRUE	canonical	3	220	junction_9	43.0188015169021	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGCTTACTGCAGTTT	15535922	True	NA	105	True	NA	NA	NA	15540222	15766649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
transcript_134971.nnic	chr8	+	1331	10	NNC	ENSG00000104723.21	novel	1203	10	NA	NA	20300	68	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	104.005104338177	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTTAGAGCTGTTT	15581886	True	NA	19	True	AATAAA	-19	NA	15581918	15764486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_15582076_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15748374_15748466_15764202
transcript_134978.known	chr8	+	1546	9	FSM	ENSG00000104723.21	ENST00000506802.5	1546	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	104.749403339589	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTGAAAATTAAACTTACT	15535932	True	NA	-25	True	GATAAA	-25	NA	15540232	15764613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_15540569_15623079_15623250_15650696_15650815_15659506_15659648_15662155_15662297_15673746_15673837_15730665_15730730_15743537_15743613_15764202
transcript_134981.known	chr8	-	1840	3	FSM	ENSG00000078579.9	ENST00000180166.6	1840	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTTTTGGCTTCATTGC	NA	False	NA	NA	False	ATTAAA	-39	NA	17002345	16992180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_16993318_16995654_16995759_17001746
transcript_134987.known	chr8	+	5924	13	FSM	ENSG00000104219.13	ENST00000262096.13	5924	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_7	22.1226065874305	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTGAAAGCTGAATACT	17154783	True	NA	10	True	AATGAA	-16	NA	17156481	17224799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17156854_17184788_17184816_17186330_17186426_17195503_17195625_17197581_17197652_17198380_17198414_17205654_17205776_17207959_17208093_17209931_17210059_17210387_17210481_17215236_17215350_17217171_17217247_17220255
transcript_134989.nnic	chr8	-	529	2	Antisense	novelGene_ENSG00000104219.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAACTTTTTTTTGTTA	-17157071	True	NA	NA	False	AATAAA	-14	NA	17157117	17154627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_-_17155009_17156969
transcript_135011.known	chr8	-	6890	7	FSM	ENSG00000198791.12	ENST00000361272.9	6890	7	0	0	0	0	multi-exon	TRUE	canonical	3	1184	junction_1	100.045684009301	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTGTATACAGACTTT	-17238342	True	NA	-33	True	AATAAA	-18	NA	17246857	17224965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17230849_17232426_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_135012.known	chr8	-	1885	6	FSM	ENSG00000198791.12	ENST00000523917.5	1885	6	0	0	0	0	multi-exon	FALSE	canonical	3	1190	junction_3	102.868070848053	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTTTTTGTAGCAATGT	-17238363	True	NA	0	True	ATTAAA	-17	NA	17246878	17231569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17232538_17234715_17234861_17237211_17237374_17242991_17243186_17245035_17245248_17246674
transcript_135013.known	chr8	-	5110	14	FSM	ENSG00000003987.14	ENST00000180173.10	5110	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	3.8829013735766	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATGTGATTATGTAGAAC	-17412488	True	NA	-20	True	AATAAA	-19	NA	17413351	17296793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17300225_17302153_17302281_17304378_17304520_17305756_17305958_17309276_17309327_17311510_17311637_17313291_17313402_17331149_17331283_17341362_17341498_17348952_17349082_17361116_17361275_17371036_17371200_17373117_17373241_17413268
transcript_135015.nic	chr8	-	1184	4	ISM	ENSG00000003987.14	ENST00000521857.5	2158	13	-43	58828	-19	12516	5prime_fragment	FALSE	canonical	3	17	junction_3	4.24264068711928	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCAAACCCACCATCCCAT	-17412507	True	NA	NA	False	NA	NA	NA	17413370	17360478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_17361275_17371036_17371200_17373117_17373241_17413268
transcript_135016.known	chr8	-	506	2	FSM	ENSG00000003987.14	ENST00000521177.1	506	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGGAATGTGTGTTTG	NA	False	NA	NA	False	NA	NA	NA	17413528	17372994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17373241_17413268
transcript_13502.known	chr1	+	1391	3	FSM	ENSG00000230623.7	ENST00000654000.1	1391	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATTTTCATGAGTCAC	200406491	True	NA	4	True	AGTAAA	-15	NA	200411720	200474725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200444613_200444946_200473908
transcript_135020.known	chr8	+	4051	12	FSM	ENSG00000155975.10	ENST00000425020.6	4051	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	131.479753649886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGCATTCTATATATT	17242753	False	NA	NA	False	AATAAA	-1	NA	17247093	17297587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17271992_17272064_17274775_17274959_17276396_17276468_17280027_17280156_17280238_17280444_17284472_17284617_17286346_17286428_17294986
transcript_135022.known	chr8	+	4519	12	FSM	ENSG00000155975.10	ENST00000324849.9	4519	12	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	30.6963265360844	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTGTCATTTTTTAA	17242617	True	NA	5	True	AATAAA	-22	NA	17246957	17298024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_135028.nic	chr8	+	1729	11	ISM	ENSG00000155975.10	ENST00000324849.9	4519	12	-64	11413	-37	0	5prime_fragment	FALSE	canonical	3	266	junction_2	32.1801180855509	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGGATATTTTCTGTG	17242553	True	NA	NA	False	TATAAA	-18	NA	17246893	17286611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346
transcript_135032.known	chr8	+	1307	11	FSM	ENSG00000155975.10	ENST00000521829.5	1307	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	99.6295638854251	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTTTGCAAACTGGCATT	17242782	False	NA	NA	False	NA	NA	NA	17247122	17295052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17280027_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_135039.known	chr8	+	2102	12	FSM	ENSG00000155975.10	ENST00000520140.5	2102	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	96.1877468528507	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTAGCTAGTTTTTAATA	17242593	True	NA	3	True	ATTAAA	-15	NA	17246933	17295277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17247370_17265906_17265982_17268257_17268373_17268855_17268957_17274732_17274959_17276396_17276468_17279721_17280156_17280238_17280298_17280374_17280444_17284472_17284617_17286346_17286428_17294986
transcript_135041.known	chr8	-	546	4	FSM	ENSG00000129422.15	ENST00000521635.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.7279220613579	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTTCCCCTCTTGATAA	-17692205	True	NA	NA	False	NA	NA	NA	17692226	17674836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17675016_17675185_17675253_17684327_17684543_17692141
transcript_135042.known	chr8	-	567	3	FSM	ENSG00000129422.15	ENST00000519066.5	567	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAAAAGGCACGTTC	NA	False	NA	NA	False	NA	NA	NA	17676494	17674734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_17675016_17675185_17675253_17676275
transcript_135046.known	chr8	+	1508	6	FSM	ENSG00000104213.13	ENST00000251630.11	1508	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.63151361133557	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGACTTAAAATACATCCA	17576597	True	NA	NA	False	AATAAA	-28	NA	17577215	17643144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17577308_17589467_17589766_17621050_17621203_17628486_17628781_17634073_17634214_17642612
transcript_135048.nnic	chr8	+	1240	5	NIC	ENSG00000104213.13	novel	1905	7	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	16.0837651064668	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGTTAAGTTGACTTA	17576560	True	NA	NA	False	AATAAA	-17	NA	17577178	17643133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_17577308_17589467_17589766_17621050_17621203_17634073_17634214_17642612
transcript_135052.nic	chr8	+	1875	10	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-253	2832	-222	0	5prime_fragment	FALSE	canonical	3	61	junction_7	60.6528270742491	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	17922677	True	NA	NA	False	AAGAAA	-5	NA	17922745	17953123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17940041_17940159_17947185_17947364_17950614_17950725_17952969
transcript_135055.nic	chr8	+	1758	9	ISM	ENSG00000078674.19	ENST00000519253.5	6443	39	-282	74680	-222	0	5prime_fragment	FALSE	canonical	3	107	junction_6	37.4797862187073	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	17922677	True	NA	NA	False	AAGAAA	-5	NA	17922745	17953123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_135059.known	chr8	+	1426	8	FSM	ENSG00000078674.19	ENST00000523055.5	1426	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	76.149155461837	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGACAAATTGCTTGGA	17914798	False	NA	NA	False	AAGAAA	-5	NA	17923009	17953123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17923189_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969
transcript_135061.nic	chr8	+	686	4	ISM	ENSG00000078674.19	ENST00000518537.5	2171	11	-253	18765	-222	-131	5prime_fragment	FALSE	canonical	3	166	junction_2	19.6129209111409	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTGTAGAAAGTGATAA	17922677	True	NA	NA	False	AATAGA	-25	NA	17922745	17937190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133
transcript_135065.known	chr8	+	6820	39	FSM	ENSG00000078674.19	ENST00000325083.13	8652	39	-148	1980	-128	-7	multi-exon	TRUE	canonical	3	107	junction_6	78.0897496651775	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTATCTTTTTTGGAAA	17921897	False	NA	NA	False	AATAAA	-16	NA	17922839	18027968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_17923189_17924712_17924781_17935588_17935707_17937133_17937380_17938739_17939010_17939690_17939862_17947185_17947364_17950614_17950725_17952969_17953187_17955469_17955654_17956603_17956778_17957263_17957422_17957539_17957776_17960013_17960166_17960314_17960445_17962033_17962175_17963100_17963292_17964567_17964769_17965998_17966219_17966327_17966474_17966979_17967171_17969576_17969749_17972328_17972688_17980590_17980756_17985446_17985620_17985958_17986088_17989858_17989980_17991541_17991701_17993482_17993620_18006262_18006398_18009546_18009745_18010608_18010669_18011236_18011367_18011666_18011828_18013963_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
transcript_135066.known	chr8	+	796	5	FSM	ENSG00000078674.19	ENST00000519802.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	48.0234317807464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTTGACACTGCTTTTT	18013803	False	NA	15	True	AATAAA	-26	NA	18013827	18027758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18014037_18014583_18014841_18025360_18025454_18025543_18025659_18027636
transcript_135067.known	chr8	-	1940	14	FSM	ENSG00000104763.20	ENST00000636033.1	1940	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	292.996314373895	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTGAAGTGTTCCCTTT	-18076423	True	NA	NA	False	NA	NA	NA	18084074	18056879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083898
transcript_135068.known	chr8	-	1989	14	FSM	ENSG00000104763.20	ENST00000636920.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	291.601454530021	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCTAAGGAAGTTGCTAAC	-18076469	True	NA	NA	False	NA	NA	NA	18084120	18056834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083940
transcript_135069.known	chr8	-	2512	14	FSM	ENSG00000104763.20	ENST00000381733.9	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	291.475779744244	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGCCAGTCAGCAGTCAT	-18084850	False	NA	-39	True	AATAAA	-14	NA	18084998	18056454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084675
transcript_135073.known	chr8	-	918	5	FSM	ENSG00000104763.20	ENST00000518087.7	918	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	426.728470458675	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076422	True	NA	-3	True	AATAAA	-24	NA	18084073	18066762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083916
transcript_135076.known	chr8	-	581	5	FSM	ENSG00000104763.20	ENST00000637792.1	581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	497.532913484123	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAGTTCACTTAGAAG	-18084812	True	NA	NA	False	AATGAA	-31	NA	18084960	18067221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069873_18071299_18071391_18075540_18075588_18084675
transcript_135080.known	chr8	+	451	4	FSM	ENSG00000245281.8	ENST00000505114.6	451	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2.05480466765633	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACTTTGTAAAATAAATGC	18084833	True	NA	NA	False	AATAAA	-21	NA	18084867	18088211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18084940_18086882_18086937_18087024_18087138_18087999
transcript_135087.known	chr8	+	2412	3	FSM	ENSG00000245281.8	ENST00000665050.1	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACTGCATTTGCTATCCTT	18084337	True	NA	NA	False	AATAAA	-3	NA	18084385	18097629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18084940_18086882_18086937_18095825
transcript_135090.known	chr8	-	2328	14	FSM	ENSG00000104763.20	ENST00000636160.1	2328	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	282.766510407941	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAATAAACAGTCACTGGA	-18076469	True	NA	-61	True	NA	NA	NA	18084120	18056476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18069791_18069879_18071299_18071412_18075540_18075588_18083980
transcript_135091.known	chr8	-	929	5	FSM	ENSG00000104763.20	ENST00000637561.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_4	29.5338788512447	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGGGGTGTCTGGGTAC	-18076497	True	NA	-3	True	AATAAA	-24	NA	18084148	18066762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_135092.known	chr8	-	780	5	FSM	ENSG00000104763.20	ENST00000637805.1	780	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	429.321776177263	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATGAACTGTCCTGTGTGA	-18084669	False	NA	-19	True	TATAAA	-13	NA	18084817	18066889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18084671
transcript_135093.known	chr8	-	2245	13	FSM	ENSG00000104763.20	ENST00000520781.6	2245	13	0	0	0	0	multi-exon	FALSE	canonical	1	30	junction_8	321.486607635355	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGTCAGCAGTCATGCA	-18076457	True	NA	-36	True	AATAAA	-17	NA	18084108	18056451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18067219_18067299_18069791_18069879_18071299_18071391_18075540_18075588_18083980
transcript_135094.known	chr8	-	2158	12	FSM	ENSG00000104763.20	ENST00000636701.1	2158	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	208.29972841918	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGTCACTGGAAAGAGTG	-18076491	True	NA	-54	True	NA	NA	NA	18084142	18056469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_18057624_18058834_18058892_18059340_18059465_18059571_18059704_18061376_18061459_18061685_18061741_18062278_18062424_18063184_18063231_18064456_18064532_18067219_18067299_18075540_18075588_18083980
transcript_135098.known	chr8	+	2162	4	FSM	ENSG00000171428.15	ENST00000518029.5	2162	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	9.20144916122817	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209737	True	NA	NA	False	AATAAA	-31	NA	18210129	18223689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18210181_18212390_18212775_18219410_18219490_18222041
transcript_13510.known	chr1	+	1098	3	FSM	ENSG00000230623.7	ENST00000659976.2	1179	3	0	81	0	-14	multi-exon	FALSE	canonical	0	0	junction_1	2	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCCCAAATGAAATTCCAA	200406454	True	NA	-73	True	ATTAAA	-18	NA	200411683	200474648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200472040_200472120_200473908
transcript_135101.known	chr8	+	1799	3	FSM	ENSG00000171428.15	ENST00000307719.9	1799	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCATCTGCCTGCTT	18209716	True	NA	NA	False	AATAAA	-31	NA	18210108	18223689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18210181_18219410_18219490_18222041
transcript_135108.known	chr8	+	1446	1	FSM	ENSG00000171428.15	ENST00000520546.1	1446	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAAAGTTTTATTGGTA	NA	False	NA	NA	False	NA	NA	NA	18221776	18223222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18221800_18223200
transcript_135109.nic	chr8	+	567	2	ISM	ENSG00000285624.2	ENST00000660285.1	549	3	418	0	418	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTCTCTTTTCAGGA	NA	False	NA	6	True	AATAAA	-21	NA	18386728	18388323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_18387037_18388064
transcript_135110.known	chr8	+	344	2	FSM	ENSG00000285624.2	ENST00000648666.1	344	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAACTGTCTGTCTCTTTTC	18387220	False	NA	2	True	AATAAA	-17	NA	18387267	18388319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18387357_18388064
transcript_135111.known	chr8	+	1285	2	FSM	ENSG00000156006.5	ENST00000286479.4	1285	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTGTCTCTAAAGTTTA	18391254	True	NA	7	True	AATAAA	-17	NA	18391281	18401218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_18391346_18399997
transcript_135112.known	chr8	+	3276	10	FSM	ENSG00000104611.12	ENST00000265807.8	3276	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	17.4928556845359	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTACAAGCTTGTTG	19313647	True	NA	9	True	AATAAA	-18	NA	19313692	19396218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19313824_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_135113.known	chr8	+	1984	10	FSM	ENSG00000104611.12	ENST00000519207.5	1984	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	12.6227308191743	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGTGTACTTGAAAACG	19312856	True	NA	NA	False	AATAAA	-31	NA	19313975	19394953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19314080_19319343_19319729_19332954_19333115_19334685_19334858_19357202_19357284_19361202_19361315_19364071_19364283_19373529_19373661_19393317_19393542_19394549
transcript_13512.known	chr1	+	1768	2	FSM	ENSG00000230623.7	ENST00000634596.2	2379	2	168	443	-12	-443	multi-exon	FALSE	canonical	3	338	junction_1	0	859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTCGATTGGAATA	200406570	True	NA	27	True	AATAAA	-20	NA	200411799	200475513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200473908
transcript_135123.known	chr8	+	2517	17	FSM	ENSG00000104613.12	ENST00000397977.8	2517	17	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_15	26.5717630907322	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	19813911	True	NA	18	True	AATAAA	-20	NA	19817415	19852067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872_19824045_19824802_19824973_19826425_19826560_19830405_19830560_19832027_19832111_19833168_19833322_19837051_19837161_19842847_19842928_19844075_19844239_19845703_19845798_19851648
transcript_135133.nic	chr8	+	1239	7	ISM	ENSG00000104613.12	ENST00000397977.8	2517	17	-260	28002	-235	-427	5prime_fragment	FALSE	canonical	3	269	junction_6	18.033918659632	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGCCTATTGATTCTTT	19817048	True	NA	12	True	AATAAA	-14	NA	19817155	19824065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_19817667_19818274_19818343_19819572_19819677_19820378_19820519_19822438_19822521_19823300_19823442_19823872
transcript_135135.known	chr8	+	631	3	FSM	ENSG00000104613.12	ENST00000520827.1	631	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	132.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAAAATTTAATTCT	19844117	True	NA	18	True	AATAAA	-20	NA	19844127	19852067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19844239_19845696_19845798_19851648
transcript_135136.known	chr8	+	3565	10	FSM	ENSG00000175445.17	ENST00000650287.1	3565	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.76095228569523	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCATTATTTTGTATC	19938176	True	NA	11	True	AATAAA	-24	NA	19939252	19967259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_19939529_19948179_19948341_19951768_19951949_19953309_19953422_19954119_19954354_19955840_19956084_19959259_19959381_19960900_19961084_19962114_19962220_19965309
transcript_135142.known	chr8	+	2856	14	FSM	ENSG00000147416.11	ENST00000276390.7	2856	14	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_8	81.6657931765065	841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAAGTGACTCTCTATCTT	20188307	True	NA	20	True	AATAAA	-23	NA	20197380	20221696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176_20211317_20211651_20211754_20212101_20212200_20212781_20212906_20214817_20214969_20216412_20216496_20217219_20217325_20218152_20218283_20220262
transcript_13515.known	chr1	+	319	2	FSM	ENSG00000230623.7	ENST00000635220.2	483	2	163	1	4	0	multi-exon	FALSE	canonical	3	307	junction_1	0	2393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGCCCCATAATTGTA	200406600	True	NA	20	True	AATAAA	-22	NA	200411829	200415550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200415364
transcript_135150.known	chr8	+	670	6	FSM	ENSG00000147416.11	ENST00000519667.1	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_3	62.7292595205778	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCAGTGTTATTGTTTGT	20188365	True	NA	NA	False	AATAAA	-17	NA	20197438	20211415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_20197543_20204483_20204540_20209432_20209532_20210345_20210440_20210568_20210647_20211176
transcript_135153.known	chr8	+	4870	28	FSM	ENSG00000130227.17	ENST00000252512.14	4870	28	0	0	0	0	multi-exon	FALSE	canonical	2	207	junction_16	40.9054917982813	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916935	True	NA	24	True	AATAAA	-20	NA	21919661	22006585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974775_21976355_21976522_21977769_21977844_21980083_21980204_21981730_21981878_21982639_21982813_21984645_21984840_21985585_21985692_21987140_21987277_21987783_21987858_21989002_21989084_21990343_21990408_21990810_21990920_21991867_21991975_21994362_21994452_21995491_21995600_21998754_21998838_21999090_21999306_21999535_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_135155.nnic	chr8	+	1561	7	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	25	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	118.009415820189	91	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGACCTGGCTTCAGCAAT	21916960	True	NA	19	True	AATAAA	-15	NA	21919686	22006580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_21974669_21974704_22005629
transcript_135158.nnic	chr8	+	2046	6	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	107.861021689951	130	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916942	True	NA	24	True	AATAAA	-20	NA	21919668	22006585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_21919721_21999659_21999675_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_135159.nnic	chr8	+	683	6	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	126.993543142949	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916960	True	NA	24	True	AATAAA	-20	NA	21919686	22006585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_21919789_21966856_21967004_21969482_21969577_21970143_21970311_21971875_21971942_22006478
transcript_135163.nnic	chr8	+	2041	5	NNC	ENSG00000130227.17	novel	4870	28	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	122.40302283849	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGCTTCAGCAATCATGT	21916942	True	NA	24	True	AATAAA	-20	NA	21919668	22006585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_21919731_22002111_22002273_22003218_22003318_22003902_22004031_22004994
transcript_135165.known	chr8	+	1490	10	FSM	ENSG00000158806.14	ENST00000518119.6	1490	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.42216638714053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22023913	True	NA	NA	False	AATAAA	-16	NA	22024133	22036897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22024624_22024723_22024831_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_135166.nic	chr8	+	1055	9	NIC	ENSG00000158806.14	novel	1490	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	3.74165738677394	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22023875	True	NA	NA	False	AATAAA	-16	NA	22024095	22036897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_22024258_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_135169.known	chr8	+	1100	9	FSM	ENSG00000158806.14	ENST00000289820.10	1100	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.278719262151	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22024812	False	NA	NA	False	AATAAA	-16	NA	22024842	22036897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22025050_22025215_22025307_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_135170.nnic	chr8	+	1003	8	NIC	ENSG00000158806.14	novel	1490	10	NA	NA	-68	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	4.3985155195259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	NA	False	NA	NA	False	AATAAA	-16	NA	22024056	22036897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_22024258_22025435_22025522_22025646_22025773_22033129_22033224_22034108_22034276_22034509_22034545_22036492_22036527_22036637
transcript_13518.known	chr1	-	4891	2	FSM	ENSG00000162702.8	ENST00000294740.3	4891	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGATATTACTTAATATCC	-200404972	True	NA	-20	True	AATAAA	-29	NA	200410056	200404939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200409720_200409945
transcript_135183.known	chr8	+	497	4	FSM	ENSG00000158806.14	ENST00000520456.5	497	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0.942809041582063	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTCTCTTCCCTGGA	22034077	False	NA	NA	False	AATAAA	-16	NA	22034107	22036897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22034276_22034509_22034545_22036492_22036527_22036637
transcript_135184.known	chr8	+	178	2	FSM	ENSG00000158806.14	ENST00000524322.1	178	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAACAGGGGTGTTGCGG	NA	False	NA	NA	False	NA	NA	NA	22036490	22036779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22036527_22036637
transcript_135185.known	chr8	+	1320	5	FSM	ENSG00000158815.11	ENST00000359441.4	1320	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTTATCTGAAGCGGGGC	22042763	False	NA	5	True	AATAAA	-17	NA	22042819	22048809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22042964_22043144_22043182_22046113_22046292_22046526_22046634_22047955
transcript_135186.known	chr8	+	1706	5	FSM	ENSG00000158815.11	ENST00000518533.5	1706	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGGTTATCTGAAGCGG	22042341	True	NA	2	True	AATAAA	-14	NA	22042397	22048806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22042964_22043144_22043182_22046146_22046292_22046526_22046634_22047955
transcript_13519.known	chr1	-	4864	2	FSM	ENSG00000162702.8	ENST00000367353.2	4864	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTGAAGAAAGGAGATATT	-200404952	True	NA	-31	True	AATAAA	-18	NA	200410036	200404950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200409724_200409945
transcript_135191.nnic	chr8	-	1485	9	NNC	ENSG00000168476.12	novel	1666	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_8	125.796897318654	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22136038	True	NA	-19	True	AATAAA	-14	NA	22141951	22138019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450_22141660_22141884
transcript_135192.known	chr8	-	1666	8	FSM	ENSG00000168476.12	ENST00000306306.8	1666	8	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_6	14.5447935842405	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22135994	True	NA	-19	True	AATAAA	-14	NA	22141907	22138019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22138553_22138638_22138794_22138925_22139062_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_135194.known	chr8	-	1476	7	FSM	ENSG00000168476.12	ENST00000334530.9	1476	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	137.255742644484	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCTCCTGATTCTTA	-22135940	True	NA	-19	True	AATAAA	-14	NA	22141853	22138019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22138553_22138638_22138794_22139415_22139530_22139962_22140084_22140171_22140249_22140624_22140698_22141450
transcript_135195.known	chr8	-	2976	5	FSM	ENSG00000168490.14	ENST00000454243.7	2976	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGCTGCTGTAACAAAA	-22231513	True	NA	1	True	AATAAA	-37	NA	22232099	22219702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22221888_22224225_22224344_22226850_22227026_22228192_22228387_22231795
transcript_135197.known	chr8	+	5494	8	FSM	ENSG00000168495.13	ENST00000397802.8	5494	8	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_4	14.030578849682	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACTGCCCTGCGTGGTCCG	22243785	False	NA	9	True	ATTAAA	-21	NA	22245234	22254600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22245615_22247220_22247265_22247856_22248009_22248153_22248279_22248480_22248650_22249043_22249310_22250074_22250228_22250395
transcript_135198.nnic	chr8	+	2727	21	NNC	ENSG00000197181.12	novel	3488	22	NA	NA	-27	-33503	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_20	7.29657453878188	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGGTTTTTTTTTTTG	22274748	True	NA	7	True	AATAAA	-15	NA	22275288	22322013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_22275399_22279340_22279585_22281119_22281208_22281376_22281516_22283033_22283241_22284161_22284273_22287527_22287646_22288541_22288667_22289846_22289928_22290232_22290347_22304020_22304210_22304783_22304869_22305926_22306017_22307932_22308074_22309960_22310075_22311111_22311301_22314327_22314430_22315028_22315146_22316244_22316334_22318169_22318276_22321845
transcript_13520.nnic	chr1	+	737	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	-12	0	-12	0	multi-exon	FALSE	canonical	3	40	junction_2	149	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGCATTATATTCTGCA	200406570	True	NA	4	True	TATAAA	-15	NA	200411799	200478349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_135202.known	chr8	+	4663	9	FSM	ENSG00000104635.15	ENST00000381237.6	4663	9	0	0	0	0	multi-exon	FALSE	canonical	3	1384	junction_5	118.754934108019	147	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGGTGGCGATGGTGTC	22351865	True	NA	20	True	AATAAA	-26	NA	22367277	22422736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22367409_22404695_22404981_22408309_22408497_22412036_22412207_22414779_22414903_22415768_22415958_22416072_22416281_22417650_22417836_22419551
transcript_135204.known	chr8	+	2194	14	FSM	ENSG00000120910.15	ENST00000240139.10	2194	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_12	8.70013262498381	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTTCTGACTTGAAC	22440702	True	NA	8	True	AATAAA	-21	NA	22441077	22541125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22441459_22474953_22475152_22475499_22475625_22498000_22498113_22511085_22511232_22513292_22513433_22522490_22522569_22522654_22522750_22527391_22527518_22528505_22528578_22532224_22532307_22532920_22533019_22539468_22539499_22540614
transcript_135206.known	chr8	+	3227	21	FSM	ENSG00000120896.14	ENST00000240123.12	3227	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	294.56018060831	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCAGACTGTTTTGATT	22551916	False	NA	NA	False	NA	NA	NA	22551926	22575788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22552023_22554451_22554609_22554862_22554981_22556714_22556909_22558128_22558193_22561334_22561374_22561864_22561932_22563986_22564078_22564282_22564370_22564467_22564522_22565267_22565355_22565825_22565873_22566344_22566485_22566660_22566714_22566821_22566869_22567060_22567176_22569147_22569274_22570909_22571222_22571717_22571822_22572339_22572447_22574666
transcript_135209.known	chr8	+	1491	10	FSM	ENSG00000120913.24	ENST00000397761.6	1491	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	157.861714762175	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTCTATAAATATATGAATA	22578763	False	NA	-18	True	GGGGCT	-35	NA	22579149	22594265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22579225_22580602_22580698_22581378_22581531_22584820_22584891_22585016_22585163_22585320_22585400_22589297_22589375_22589595_22589742_22591550_22591669_22593732
transcript_13522.nnic	chr1	+	1118	3	FSM	ENSG00000230623.7	ENST00000427825.2	725	3	-12	-381	-12	61	multi-exon	FALSE	canonical	3	40	junction_2	149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGGCGGGGTGGCTCA	200406570	True	NA	NA	False	AAAAAG	-1	NA	200411799	200478730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200411963_200473908_200474101_200477967
transcript_135225.known	chr8	+	599	4	FSM	ENSG00000120913.24	ENST00000614502.4	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	73.9203775844132	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACAATGGTGGGCAGT	22585522	True	NA	NA	False	NA	NA	NA	22589281	22593974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22589375_22589595_22589742_22591550_22591669_22593732
transcript_135229.known	chr8	+	701	3	FSM	ENSG00000120913.24	ENST00000443561.3	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	169	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGTGGGAAGGAGAG	22585523	True	NA	-88	True	NA	NA	NA	22589282	22594195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22589375_22589595_22589742_22593732
transcript_135231.known	chr8	+	4853	21	FSM	ENSG00000158941.17	ENST00000308511.9	3685	21	-125	-1043	-125	550	multi-exon	FALSE	canonical	3	780	junction_7	69.7530465284492	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGATGGGACAGGTCTC	22603474	False	NA	NA	False	NA	NA	NA	22604631	22621514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22604843_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_135233.known	chr8	+	3980	21	FSM	ENSG00000158941.17	ENST00000389279.7	3980	21	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	193.186406095253	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGAGTGTGTCCTCCACA	22604976	False	NA	62	True	AATAAA	-18	NA	22605037	22620471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_22605419_22605735_22605832_22606084_22606177_22606606_22606699_22606909_22607025_22607195_22607326_22607968_22608066_22613016_22613137_22614091_22614315_22614389_22614504_22614837_22615002_22615424_22615597_22615681_22615913_22616011_22616249_22617419_22617565_22617695_22617779_22618348_22618496_22618616_22618729_22618826_22619016_22619149_22619356_22619637
transcript_135238.nnic	chr8	-	1581	9	NNC	ENSG00000147439.14	novel	1836	9	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	52.9598904832704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	-22666535	True	NA	37	True	AGTAAA	-19	NA	22669134	22620711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636895_22636963_22644754_22644804_22669043
transcript_13524.nnic	chr1	+	1301	3	NIC	ENSG00000230623.7	novel	1347	5	NA	NA	5	57	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	169	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTAGCCTGGCGGGGTGG	200406469	True	NA	NA	False	AAGAAA	-7	NA	200411698	200478726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_200411963_200473908_200474187_200477967
transcript_135240.known	chr8	-	1836	9	FSM	ENSG00000147439.14	ENST00000276416.11	1836	9	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	8.7740740252177	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCAACTTTATATACAAAG	-22666522	True	NA	NA	False	TTTAAA	-28	NA	22669121	22620417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22644754_22644804_22669043
transcript_135242.known	chr8	-	893	8	FSM	ENSG00000147439.14	ENST00000519335.5	893	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	54.0551494649073	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCAGGAGCCCTAGGCAG	-22666480	True	NA	NA	False	AATGAA	-19	NA	22669079	22621269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636524_22636587_22636921_22636963_22669043
transcript_135243.nic	chr8	-	1493	8	NIC	ENSG00000147439.14	novel	1836	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_5	52.3200511764088	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	-22666535	True	NA	37	True	AGTAAA	-19	NA	22669134	22620711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22636921_22636963_22644754_22644804_22669043
transcript_135245.known	chr8	-	1431	7	FSM	ENSG00000147439.14	ENST00000519513.5	1431	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	59.2267300765082	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTATTGTGCTGTAAC	-22666514	True	NA	37	True	AGTAAA	-19	NA	22669113	22620711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_22621569_22623914_22624050_22624221_22624364_22629963_22630005_22630441_22630579_22644754_22644804_22669043
transcript_135247.known	chr8	-	1723	10	FSM	ENSG00000120889.13	ENST00000347739.3	1723	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_5	69.8030739710112	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCGACTTCACTTGATAC	-23061005	True	NA	2	True	NA	NA	NA	23069021	23022310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028442_23028528_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_135251.known	chr8	-	3998	9	FSM	ENSG00000120889.13	ENST00000276431.9	3998	9	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_7	21.9512955198549	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTGTGGTTTTTGTCTCC	-23061015	True	NA	NA	False	ATTAAA	-21	NA	23069031	23020132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23022985_23024187_23024261_23027132_23027289_23027721_23027754_23028330_23028603_23029609_23029722_23030758_23030873_23043137_23043244_23068750
transcript_135267.known	chr8	+	1395	5	FSM	ENSG00000173535.15	ENST00000356864.4	1395	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	11.9242400177118	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCGTGTGTTGGTTTTT	23102650	True	NA	NA	False	NA	NA	NA	23102920	23117445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23103182_23111719_23111826_23114656_23114771_23115507_23115617_23116640
transcript_13527.known	chr1	-	7291	30	FSM	ENSG00000118193.12	ENST00000367350.5	7291	30	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_20	15.5422786515913	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTCGTGGTCTATGCTT	-200617121	True	NA	-4	True	AATAAA	-18	NA	200620751	200551499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200553768_200554467_200554607_200555379_200555455_200559329_200559453_200560721_200560881_200565068_200565254_200565444_200565670_200569910_200570006_200575590_200575692_200580253_200580384_200581200_200581295_200586100_200586228_200589216_200589370_200590124_200590273_200592079_200592241_200593666_200593770_200598236_200598422_200600049_200600114_200600355_200600504_200601895_200602069_200603225_200603342_200603838_200603956_200605282_200605391_200605863_200605895_200606745_200606799_200608829_200608929_200614317_200614406_200615354_200615610_200617611_200618839_200620410
transcript_135271.known	chr8	+	1242	4	FSM	ENSG00000284948.1	ENST00000397703.6	1242	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.24721912892465	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTTCCTTGGAGATCGGT	23084201	True	NA	12	True	AATAAA	-27	NA	23084354	23103558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23084546_23090147_23090289_23100636_23100685_23102696
transcript_135272.nnic	chr8	+	654	4	NNC	ENSG00000173535.15	novel	1395	5	NA	NA	-22	-1363	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	81.0980202525862	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGACTCCTCTGAGTGC	23102628	True	NA	NA	False	AATAAA	-19	NA	23102898	23115311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_23103182_23111719_23111826_23114656_23114771_23115160
transcript_135274.known	chr8	-	3535	9	FSM	ENSG00000173530.6	ENST00000312584.4	3535	9	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	16.1380760935125	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGTTCGTTTATTT	-23161665	True	NA	NA	False	AATAAA	-22	NA	23164027	23135587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23138004_23138187_23138261_23144449_23144636_23145057_23145090_23145667_23145922_23146960_23147073_23148437_23148552_23154873_23154980_23163785
transcript_135277.known	chr8	-	2690	10	FSM	ENSG00000104689.10	ENST00000221132.8	2690	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	4.24264068711928	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAAAAGAATTGCTTCC	-23223443	True	NA	99	True	NA	NA	NA	23225102	23190451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23192014_23197131_23197205_23199265_23199449_23199885_23199918_23200504_23200601_23200686_23200761_23201807_23201920_23202647_23202762_23212115_23212213_23224755
transcript_135286.nnic	chr8	+	1333	3	NNC	ENSG00000246582.3	novel	1239	2	NA	NA	-18	-3	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	24	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATTATTTCTTCTTTC	23224995	True	NA	15	True	AATAAA	-27	NA	23225202	23228656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_23225626_23225804_23226124_23228065
transcript_135290.known	chr8	+	3367	10	FSM	ENSG00000147457.14	ENST00000313219.8	3367	10	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	22.7796747177591	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTCTCCTCTTTAGGT	NA	False	NA	11	True	ATTAAA	-18	NA	23246090	23261999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23246995_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_135293.known	chr8	+	2639	10	FSM	ENSG00000147457.14	ENST00000517325.5	2639	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	96.0578529382742	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACACTTGTCCCGTCTCCTC	23243935	True	NA	4	True	ATTAAA	-11	NA	23246641	23261992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23246825_23249209_23249382_23255246_23255433_23256459_23256594_23258032_23258082_23258329_23258450_23258731_23258831_23259065_23259127_23260143_23260324_23260537
transcript_135302.known	chr8	+	1500	9	FSM	ENSG00000104679.12	ENST00000522012.6	1500	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.3118512860654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGCGTCCCGACGTAGCT	NA	False	NA	NA	False	NA	NA	NA	23287907	23296121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290220_23290334_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_135306.known	chr8	+	1573	8	FSM	ENSG00000104679.12	ENST00000265806.12	1573	8	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	25.6316131337209	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTGAAATGTGGTCTG	23286140	True	NA	21	True	AATAAA	-23	NA	23288107	23296279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23288158_23288505_23288634_23289015_23289154_23289865_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295966
transcript_135315.known	chr8	+	569	5	FSM	ENSG00000104679.12	ENST00000520480.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	107.057227686878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGGTGTTCCATCCTG	23290394	False	NA	NA	False	AATAAA	-23	NA	23290412	23295630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23290470_23291360_23291534_23293302_23293374_23294768_23294865_23295458
transcript_135316.known	chr8	-	3721	14	FSM	ENSG00000134013.16	ENST00000389131.8	3721	14	0	0	0	0	multi-exon	TRUE	canonical	2	103	junction_11	38.4795342515085	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAAGGCATAGGAGTTGT	-23399148	True	NA	NA	False	NA	NA	NA	23404120	23296896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23298123_23298835_23298948_23302026_23302164_23303281_23303398_23309667_23309912_23316948_23317115_23319884_23320053_23322129_23322282_23328381_23328566_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_135318.nnic	chr8	-	1397	6	NNC	ENSG00000134013.16	novel	975	4	NA	NA	-29	832	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	66.9907456295271	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTCCCTTGGTTTCTTT	-23399183	True	NA	5	True	ATTAAA	-25	NA	23404155	23330604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_23330751_23333400_23333624_23340991_23341204_23360089_23360266_23367996_23368435_23403953
transcript_135320.known	chr8	-	5803	13	FSM	ENSG00000197217.13	ENST00000358689.9	5803	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_5	46.5983875495947	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCGTAGACTGTGTGGG	-23453996	True	NA	-10	True	AATAAA	-20	NA	23457647	23429161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_135321.known	chr8	-	2063	13	FSM	ENSG00000197217.13	ENST00000417069.6	2063	13	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	36.4793510846281	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCTCACAGCTCCACGA	-23454044	True	NA	NA	False	NA	NA	NA	23457695	23432925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23433155_23434316_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441592_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_135324.known	chr8	-	2026	12	FSM	ENSG00000197217.13	ENST00000523958.5	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	48.6660062599065	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTTTGGTTATTCTC	-23453988	True	NA	NA	False	AATACA	-20	NA	23457639	23434092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23434479_23435391_23435478_23436933_23437259_23439748_23439916_23441568_23441724_23442006_23442067_23443849_23443954_23444455_23444607_23447679_23447886_23448741_23448940_23449892_23449998_23457556
transcript_135328.nic	chr8	-	461	2	ISM	ENSG00000197217.13	ENST00000518471.5	790	5	32941	0	30587	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTATTTTATTCTAC	-23399179	True	NA	NA	False	AATAAA	-19	NA	23404151	23385782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_23386046_23403953
transcript_135329.known	chr8	+	4672	4	FSM	ENSG00000147454.14	ENST00000519973.6	4672	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	104.964544278321	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGTGGGCTCTGTGGTG	23526343	True	NA	16	True	AATAAA	-16	NA	23528955	23575463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107_23566337_23568321_23568379_23571334
transcript_135333.known	chr8	+	1889	4	FSM	ENSG00000147454.14	ENST00000290075.10	1889	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	106.686456497533	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	23526343	True	NA	NA	False	AAGAAA	-23	NA	23528955	23572203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107_23566814_23568321_23568379_23571334
transcript_135338.nic	chr8	+	1248	3	ISM	ENSG00000147454.14	ENST00000523930.1	823	4	-224	2895	-120	-2	5prime_fragment	FALSE	canonical	3	45	junction_2	36.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAAATGCTAATTCTG	NA	False	NA	NA	False	NA	NA	NA	23528835	23568963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_23529213_23566107_23566337_23568321
transcript_135339.known	chr8	+	3018	2	FSM	ENSG00000147454.14	ENST00000520654.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTAATTCTGGC	23529023	False	NA	NA	False	NA	NA	NA	23529052	23568965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23566107
transcript_13534.known	chr1	-	2229	8	FSM	ENSG00000118197.14	ENST00000331314.11	2229	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	10.5810766783664	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAAGTTTCTTTTTTCTTTT	-200668343	True	NA	NA	False	AATAAA	-23	NA	200669907	200644036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_200644518_200648438_200648568_200649073_200649227_200650424_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_135340.known	chr8	+	479	2	FSM	ENSG00000147454.14	ENST00000519192.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTATTAGTGAGAGTGTAA	23526362	True	NA	NA	False	AATAAA	-16	NA	23528974	23531925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_23529213_23531684
transcript_135341.known	chr8	-	3868	4	FSM	ENSG00000159167.12	ENST00000290271.7	3868	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	10.2089285540757	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTTTCCCCCCATGTCTT	-23854412	True	NA	-14	True	AATAAA	-14	NA	23854806	23841928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854405
transcript_135342.known	chr8	-	1748	4	FSM	ENSG00000159167.12	ENST00000524323.1	1748	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	98.8612945270067	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGGAATGGAATAACTAT	-23853917	False	NA	NA	False	NA	NA	NA	23854311	23843913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_23845041_23851319_23851532_23852241_23852385_23854045
transcript_135347.known	chr8	+	3271	3	FSM	ENSG00000104722.14	ENST00000221166.10	3271	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.5	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	24911334	True	NA	12	True	AATAAA	-19	NA	24913760	24919093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24914874_24915604_24915730_24917060
transcript_135349.known	chr8	+	2519	3	FSM	ENSG00000104722.14	ENST00000433454.3	2519	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	76.5	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGTCTTATGTCATT	24912515	False	NA	17	True	AATAAA	-24	NA	24914941	24919098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24915298_24915604_24915730_24917060
transcript_135353.nic	chr8	+	2294	2	ISM	ENSG00000104722.14	ENST00000433454.3	2519	3	527	5	527	0	3prime_fragment	FALSE	canonical	3	165	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATTGCTGAGTCTTATG	24915215	True	NA	12	True	AATAAA	-19	NA	24915468	24919093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_24915730_24917060
transcript_135355.known	chr8	-	2553	1	FSM	ENSG00000272163.1	ENST00000607058.1	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACACAGACTTCTTGCTGTC	-24913786	False	NA	-7	True	ATTAAA	-24	NA	24914717	24912164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_24912200_24914700
transcript_135356.known	chr8	-	3584	4	FSM	ENSG00000277586.4	ENST00000610854.2	3584	4	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	54.6158300210561	260	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGCTTAAAGTCTTTTTT	-24952531	True	NA	-3	True	AATAAA	-18	NA	24956612	24950954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_24952953_24953475_24953796_24954180_24954306_24955471
transcript_135358.known	chr8	+	490	1	FSM	ENSG00000272157.1	ENST00000607735.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAGTATGTATGGAGAAGA	24956568	False	NA	8	True	AATAAA	-19	NA	24956620	24957110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_24956600_24957100
transcript_135360.known	chr8	-	3367	12	FSM	ENSG00000104756.16	ENST00000221200.9	3367	12	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_11	10.816271794717	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTATTTTTATCATTC	-25457774	True	NA	-4	True	ATTAAA	-20	NA	25458433	25427846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_25429974_25432503_25432638_25433329_25433436_25435362_25435513_25436234_25436331_25436417_25436486_25439278_25439408_25439605_25439665_25440576_25440674_25444291_25444336_25446128_25446251_25458198
transcript_135372.known	chr8	+	3486	15	FSM	ENSG00000184661.14	ENST00000330560.8	3486	15	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_13	24.2374520449789	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAGAAAACATTCTATTAA	25448857	True	NA	24	True	AATAAA	-20	NA	25459232	25507911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_25459474_25460239_25460301_25460383_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_135374.known	chr8	+	3565	14	FSM	ENSG00000184661.14	ENST00000380665.3	3565	14	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_12	25.0523711806916	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTTATGTAGAAATAAAT	25448823	True	NA	-14	True	AATAAA	-23	NA	25459198	25507873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_25459474_25460239_25460555_25462053_25462209_25466174_25466326_25468216_25468414_25469895_25469981_25479912_25480125_25483398_25483487_25483965_25484211_25485758_25485838_25487245_25487335_25488551_25488690_25503372_25503545_25506509
transcript_135382.nic	chr8	+	1496	3	ISM	ENSG00000184661.14	ENST00000330560.8	3486	15	-294	46628	-260	-788	5prime_fragment	FALSE	canonical	3	233	junction_1	11.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACACAAACAGAAG	25458882	True	NA	NA	False	NA	NA	NA	25458938	25461283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_25459474_25460239_25460301_25460383
transcript_135384.nic	chr8	+	1498	2	ISM	ENSG00000184661.14	ENST00000380665.3	3565	14	-182	46593	-182	-791	5prime_fragment	FALSE	canonical	3	233	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAACACAAACAG	25458460	True	NA	NA	False	NA	NA	NA	25459016	25461280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_25459474_25460239
transcript_135385.known	chr8	-	5166	16	FSM	ENSG00000221818.9	ENST00000520164.6	5166	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	3.97994974842648	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGACCTTTGCTTTTT	-26044624	True	NA	NA	False	AATAAA	-19	NA	26045413	25841724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_25844641_25850593_25850762_25858318_25858505_25861048_25861227_25861308_25861375_25862708_25862798_25886754_25886882_25887841_25887973_25889751_25889870_25908473_25908556_26033084_26033154_26040027_26040102_26040615_26040672_26040938_26041003_26042094_26042252_26044728
transcript_135394.known	chr8	+	3923	10	FSM	ENSG00000221914.11	ENST00000380737.8	3923	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_7	27.2600644003478	637	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTGTCAAGTTGCT	26288365	True	NA	14	True	AATAAA	-19	NA	26291507	26372680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26291827_26293665_26293741_26338889_26338988_26354467_26354634_26360168_26360282_26360973_26361152_26362683_26362849_26363720_26363891_26366314_26366407_26370133
transcript_135416.known	chr8	+	3452	6	FSM	ENSG00000104765.16	ENST00000380629.7	3452	6	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	59.2128364461626	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTCAGTATATCATTT	26377840	True	NA	12	True	ATTAAA	-16	NA	26383053	26413127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_135418.known	chr8	+	875	6	FSM	ENSG00000104765.16	ENST00000523949.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	404.53331136014	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTGTTAAAATTTG	26377983	False	NA	NA	False	AATAAA	-19	NA	26383196	26505636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383231_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26505306
transcript_135420.known	chr8	+	915	6	FSM	ENSG00000104765.16	ENST00000523515.5	915	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	403.133030152579	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCTTTTCCGCAAATG	26378164	False	NA	NA	False	NA	NA	NA	26383377	26410666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383479_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_135422.known	chr8	+	739	6	FSM	ENSG00000104765.16	ENST00000520409.5	739	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	402.341645868284	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACCACCCTGTTTTTACA	26383276	True	NA	NA	False	NA	NA	NA	26383414	26410509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_26383497_26391242_26391427_26395229_26395303_26407999_26408104_26408226_26408377_26410363
transcript_135427.known	chr8	-	4730	3	FSM	ENSG00000240694.9	ENST00000522362.7	4730	3	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGTTTTTCTGTTTCC	-26513098	True	NA	-21	True	AATAAA	-16	NA	26513872	26504700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_26509244_26509547_26509678_26513815
transcript_135428.known	chr8	-	1224	8	FSM	ENSG00000015592.17	ENST00000523048.5	1224	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTGAAGGACAGAGTCCTG	NA	False	NA	NA	False	NA	NA	NA	27258420	27236474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27236906_27239225_27239280_27239970_27240163_27241053_27241263_27241676_27241758_27242396_27242493_27243710_27243802_27258350
transcript_13543.nic	chr1	-	1524	5	ISM	ENSG00000118197.14	ENST00000331314.11	2229	8	-76	6406	-76	0	5prime_fragment	FALSE	canonical	3	59	junction_1	10.8943792847505	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTGAAATTTTAAATGT	-200668419	True	NA	NA	False	AAAAAG	-7	NA	200669983	200650442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_200650677_200659026_200659117_200663918_200664087_200665936_200666752_200669766
transcript_135430.known	chr8	-	1250	6	FSM	ENSG00000015592.17	ENST00000265770.11	1250	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAAGTGTCCAGTTCTTT	NA	False	NA	-4	True	AATGAA	-8	NA	27258409	27236302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27236906_27239970_27240163_27241053_27241263_27242396_27242493_27243710_27243802_27258350
transcript_135435.known	chr8	+	2776	19	FSM	ENSG00000120915.14	ENST00000521400.6	2776	19	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_13	7.6955975870768	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGCAGCACACTTGCA	27489451	True	NA	NA	False	NA	NA	NA	27491142	27545564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27515717_27515814_27516319_27516399_27518037_27518073_27520882_27520910_27522422_27522509_27525361_27525474_27536783_27536856_27538658_27538693_27540553_27540657_27541472_27541543_27543748_27543830_27544185_27544245_27544443
transcript_135442.nnic	chr8	+	990	9	NIC	ENSG00000120915.14	novel	1923	14	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	30.511268410212	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGGCCTCGGGCAATA	27489411	True	NA	NA	False	NA	NA	NA	27491102	27522509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835_27511911_27518037_27518073_27520882_27520910_27522422
transcript_135443.nnic	chr8	+	854	6	NNC	ENSG00000120915.14	novel	1923	14	NA	NA	-22	1837	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_5	35.0394063876659	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATCTTTGTGTGTGT	27489411	True	NA	39	True	NA	NA	NA	27491102	27508741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27508653
transcript_135444.nic	chr8	+	1031	6	ISM	ENSG00000120915.14	ENST00000520623.5	1923	14	-22	27155	-22	0	5prime_fragment	FALSE	canonical	3	80	junction_3	5.70613704707484	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	27489411	True	NA	NA	False	NA	NA	NA	27491102	27512100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_27491310_27500925_27501011_27503603_27503764_27504955_27505147_27506871_27506995_27511835
transcript_135448.known	chr8	+	488	3	FSM	ENSG00000120915.14	ENST00000521924.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGG	NA	False	NA	NA	False	NA	NA	NA	27505046	27512100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_27505147_27506871_27506995_27511835
transcript_135454.known	chr8	-	2098	9	FSM	ENSG00000120885.22	ENST00000405140.7	2098	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	433.480968440369	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCACTTCAAGAATTGCT	-27610808	False	NA	NA	False	AATAAA	-36	NA	27611431	27597807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27611145
transcript_135458.known	chr8	-	2749	9	FSM	ENSG00000120885.22	ENST00000316403.15	2749	9	0	0	0	0	multi-exon	TRUE	canonical	3	1088	junction_4	105.03087343729	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTTTTCCACTGTTA	-27614077	True	NA	NA	False	NA	NA	NA	27614700	27596916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27598251_27598459_27598636_27599779_27600010_27604290_27604396_27604923_27605336_27606353_27606525_27608937_27609087_27610474_27610601_27614654
transcript_135459.known	chr8	-	303	3	FSM	ENSG00000120885.22	ENST00000519472.5	303	3	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_2	123.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGAGGAGCCGCTACCGC	-27614058	True	NA	21	True	AAGAAA	-5	NA	27614681	27608936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27609087_27610474_27610601_27614654
transcript_135463.known	chr8	+	3754	11	FSM	ENSG00000171320.15	ENST00000305188.13	3754	11	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_4	17.8044938147649	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGAGGCTTCCCTTAATC	27770245	True	NA	NA	False	NA	NA	NA	27774553	27805316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_27774608_27775498_27775568_27776361_27777170_27780173_27780268_27783999_27784058_27787884_27788003_27788846_27788979_27791962_27792053_27792667_27792812_27799540_27799717_27803305
transcript_135467.known	chr8	-	1836	8	FSM	ENSG00000168078.10	ENST00000301905.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	12.0678354753959	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTCTCAGCATTATT	-27836993	True	NA	-24	True	AATAAA	-44	NA	27837817	27809623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27822318_27822489_27823062_27823206_27828104_27828199_27833055_27833134_27837651
transcript_135473.known	chr8	-	785	7	FSM	ENSG00000147419.19	ENST00000522915.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	186.071148279958	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGACAGAAAAGGATCAGA	-27764862	True	NA	48	True	TTTAAA	-18	NA	27772634	27736051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27772512
transcript_135477.known	chr8	-	819	6	FSM	ENSG00000168078.10	ENST00000524266.1	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	53.5708876163164	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAAGTGTGGCTTGCGTA	-27836959	True	NA	NA	False	NA	NA	NA	27837783	27810293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27810502_27810957_27811135_27820564_27820695_27828104_27828199_27833055_27833134_27837651
transcript_13548.known	chr1	+	345	1	FSM	ENSG00000231333.2	ENST00000432390.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	130	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGAAGCTTTTTTGAG	200863797	False	NA	NA	False	NA	NA	NA	200863807	200864152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_200863800_200864200
transcript_135484.known	chr8	-	3627	9	FSM	ENSG00000147419.19	ENST00000356537.9	3627	9	0	0	0	0	multi-exon	FALSE	canonical	3	382	junction_6	36.5684290064531	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGTGTGAGAGAGATT	-27764868	True	NA	-5	True	AATAAA	-21	NA	27772640	27733315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_135485.known	chr8	-	3586	8	FSM	ENSG00000147419.19	ENST00000520486.5	3586	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	127.942908186042	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGTGTGTGTGAGAGAGA	-27764881	False	NA	-7	True	AATAAA	-19	NA	27772653	27733317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27748494_27748599_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_135486.known	chr8	-	1734	7	FSM	ENSG00000147419.19	ENST00000520202.5	1734	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	189.310517991532	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACATTGATATATGAATTC	-27764867	True	NA	-15	True	AATAAA	-23	NA	27772639	27735051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27762418_27762459_27765203_27765252_27772512
transcript_135487.known	chr8	-	977	8	FSM	ENSG00000147419.19	ENST00000519509.5	977	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	147.612841651423	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTTGAAACACTTTTCA	-27764868	True	NA	33	True	AAAACA	-2	NA	27772640	27735861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27748076_27748280_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_135488.known	chr8	-	877	8	FSM	ENSG00000147419.19	ENST00000517979.1	877	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	195.603722680655	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGAGCTGTGGCATTGAGA	-27764841	True	NA	NA	False	AAAAAG	-43	NA	27772613	27748071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27748280_27748494_27748599_27752511_27752588_27756718_27756771_27762418_27762459_27764285_27764534_27765203_27765252_27772512
transcript_135489.known	chr8	-	460	7	FSM	ENSG00000147419.19	ENST00000524084.5	460	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	168.31815113053	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTTTGGTTTCATCTG	-27764855	True	NA	-63	True	NA	NA	NA	27772627	27736162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_27736246_27740471_27740518_27752511_27752588_27756718_27756771_27762418_27762459_27765203_27765252_27772512
transcript_135494.known	chr8	+	3148	15	FSM	ENSG00000134014.17	ENST00000256398.13	3148	15	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	28.6624443180569	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGAGTCATGTGGTTTTCT	28090155	True	NA	7	True	AATAAA	-19	NA	28093138	28191153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_135497.known	chr8	+	1914	14	FSM	ENSG00000134014.17	ENST00000524103.5	1914	14	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	50.2679212353708	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCTGCAGGTGGCCTATT	28090128	True	NA	-94	True	NA	NA	NA	28093111	28189992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_135502.known	chr8	+	1924	13	FSM	ENSG00000134014.17	ENST00000519261.5	1924	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	69.2597265531869	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTAAGAGTAGTTTATT	28090156	True	NA	8	True	AATAAA	-22	NA	28093139	28190094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28093234_28099827_28099967_28106712_28106784_28110369_28110439_28113018_28113174_28129501_28129664_28132277_28132405_28137697_28137892_28155941_28156033_28158567_28158634_28160228_28160457_28161996_28162079_28189648
transcript_135505.nic	chr8	+	798	7	NIC	ENSG00000134014.17	novel	879	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_6	64.6849201042166	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTATATTTGTCTT	28090125	True	NA	NA	False	AATAAA	-17	NA	28093108	28112701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28112471
transcript_135508.nic	chr8	+	734	6	NIC	ENSG00000134014.17	novel	879	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_5	75.5449535045194	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTATATTTGTCTT	28090125	True	NA	NA	False	AATAAA	-17	NA	28093108	28112701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_28093234_28097218_28097319_28099827_28099967_28106712_28106784_28110369_28110439_28112471
transcript_135509.known	chr8	+	563	5	FSM	ENSG00000134014.17	ENST00000522063.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	78.6650335282456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTATTATATTTGTCTT	28096854	False	NA	NA	False	AATAAA	-17	NA	28099837	28112701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28099967_28106712_28106784_28107912_28107977_28110369_28110439_28112471
transcript_135513.known	chr8	-	1254	9	FSM	ENSG00000214050.8	ENST00000380254.7	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.6810274454602	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	-28489191	True	NA	-25	True	AGTAAA	-16	NA	28490229	28428411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483463_28490185
transcript_135514.nic	chr8	-	1339	9	NIC	ENSG00000214050.8	novel	1254	9	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	34.1723572496836	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGTGGACAGATTTACG	-28489255	True	NA	-25	True	AGTAAA	-16	NA	28490293	28428411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_28428737_28429377_28429404_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28473771_28473808_28483347_28483484_28490185
transcript_135524.known	chr8	-	1205	7	FSM	ENSG00000214050.8	ENST00000346498.6	1205	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	22.300971578237	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTACGGTATTTCAGTAA	-28489240	True	NA	-61	True	NA	NA	NA	28490278	28428447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28428737_28447170_28447274_28452243_28452477_28456765_28456931_28463611_28463819_28483347_28483463_28490185
transcript_135535.nic	chr8	-	1371	4	ISM	ENSG00000214050.8	ENST00000517673.5	607	5	-63	10434	-9	2498	5prime_fragment	FALSE	canonical	3	72	junction_1	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGTCATTTTGTTGAG	-28489249	True	NA	NA	False	ATTAAA	-29	NA	28490287	28462700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_28463819_28473771_28473808_28483347_28483463_28490185
transcript_135538.nic	chr8	-	554	4	NIC	ENSG00000214050.8	novel	398	3	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	32.7651576458218	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGTTGACATTTTGT	-28489303	True	NA	-2	True	AATAAA	-21	NA	28490341	28465198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_28465446_28473771_28473808_28483347_28483463_28490185
transcript_135542.known	chr8	-	398	3	FSM	ENSG00000214050.8	ENST00000519471.2	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	34.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTGTTGACATTTTGT	-28482424	False	NA	-2	True	AATAAA	-21	NA	28483462	28465198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28465446_28473771_28473808_28483347
transcript_135544.known	chr8	-	4797	10	FSM	ENSG00000186918.14	ENST00000344423.10	4797	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	23.6220236220354	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGTGTGCCTGTCCTT	NA	False	NA	-5	True	AATAAA	-17	NA	28386460	28345589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28348831_28349124_28349229_28350063_28350157_28351494_28351808_28352572_28352674_28353172_28353409_28356669_28356780_28359591_28359825_28360884_28361183_28386392
transcript_135545.known	chr8	+	13770	8	FSM	ENSG00000104290.11	ENST00000240093.8	13770	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	42.5186633690886	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTCATTAGTACCTG	28489869	True	NA	12	True	AATAAA	-15	NA	28494211	28574258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28494344_28499932_28499979_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_135546.known	chr8	+	13740	7	FSM	ENSG00000104290.11	ENST00000537916.2	13740	7	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_5	48.0326856306088	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAGTACCTGATTAATTAT	28489862	True	NA	21	True	AATAAA	-24	NA	28494204	28574267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28494344_28502669_28503203_28520637_28520835_28527146_28528165_28551602_28551752_28555737_28555972_28562797
transcript_135553.known	chr8	+	580	2	FSM	ENSG00000104290.11	ENST00000523546.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAAGATTTGCCTTATAAT	28489871	True	NA	NA	False	NA	NA	NA	28494213	28503119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28494344_28502669
transcript_135555.nnic	chr8	+	670	2	NNC	ENSG00000012232.9	novel	803	4	NA	NA	51	-10987	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACTTAAATTTTGTGGA	28696703	True	NA	16	True	AATAAA	-17	NA	28701551	28702526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_28701660_28701964
transcript_135560.known	chr8	-	2549	17	FSM	ENSG00000104299.15	ENST00000521022.6	2549	17	0	0	0	0	multi-exon	TRUE	canonical	3	133	junction_3	15.6599608875629	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28887292	True	NA	-5	True	AATAAA	-18	NA	28889969	28767660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_135561.known	chr8	-	2759	16	FSM	ENSG00000104299.15	ENST00000416984.6	2759	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	42.8620526288179	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGTCCTCTGTTGAAC	-28890231	False	NA	-5	True	AATAAA	-18	NA	28890242	28767660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28768323_28769888_28770027_28770981_28771081_28775758_28775927_28777828_28777954_28780822_28780995_28787828_28787890_28793806_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28850212_28850274_28859435_28859564_28889873
transcript_135569.known	chr8	-	1154	10	FSM	ENSG00000104299.15	ENST00000520983.5	1154	10	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	15.5547618845147	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTTCTCACATTACTG	-28887244	True	NA	NA	False	AATAAA	-9	NA	28889921	28793728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28793988_28796543_28796656_28812326_28812462_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_135572.known	chr8	-	929	9	FSM	ENSG00000104299.15	ENST00000523436.5	929	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	56.0623258079791	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGTCCGTGGTTTTTTTT	-28887232	True	NA	NA	False	NA	NA	NA	28889909	28793806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_28793988_28796543_28796656_28813491_28813613_28835291_28835379_28837636_28837777_28846746_28846810_28850212_28850274_28859435_28859564_28889873
transcript_135584.nic	chr8	+	2449	11	NIC	ENSG00000147421.18	novel	1731	10	NA	NA	-16	-2	combination_of_known_junctions	FALSE	canonical	1	1	junction_10	3.80131556174964	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCCAGCTTGAGAGCATT	NA	False	NA	NA	False	ATTAAA	-44	NA	28890378	29051915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29049289_29049362_29051017
transcript_135588.known	chr8	+	3711	10	FSM	ENSG00000147421.18	ENST00000287701.15	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3.28107179116298	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGAAGTGAAGTGGAGC	28889965	True	NA	NA	False	AATATA	-22	NA	28890394	29053262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048953_29049049_29051017
transcript_135589.nic	chr8	+	2379	10	NIC	ENSG00000147421.18	novel	2216	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	3.43187671366233	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGCTTGAGAGCATTGG	NA	False	NA	NA	False	ATTAAA	-17	NA	28890378	29051917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_28890679_28963810_28963891_28970042_28970520_28980070_28980157_29009071_29009183_29018759_29018914_29045360_29045444_29047357_29047454_29048956_29049049_29051017
transcript_13559.known	chr1	+	2497	2	FSM	ENSG00000229191.1	ENST00000446333.1	2497	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	201023639	True	NA	NA	False	NA	NA	NA	201023948	201027790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201024077_201025421
transcript_135596.known	chr8	-	8743	40	FSM	ENSG00000197892.13	ENST00000524189.6	8743	40	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_21	4.23954024773478	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTCTGAGGCCAGTCTT	-29261757	True	NA	-9	True	AATAAA	-23	NA	29263070	29067277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_29070767_29071619_29072317_29075280_29075344_29092744_29092879_29099132_29099242_29108138_29108193_29109433_29109512_29109917_29110071_29113462_29113556_29116830_29117008_29118867_29118993_29122590_29122647_29123365_29123493_29124023_29124124_29126481_29126512_29127121_29127269_29130532_29130666_29132307_29132466_29134039_29134211_29140062_29140192_29140467_29140618_29142156_29142304_29146377_29146541_29147391_29147603_29148576_29148768_29150296_29150384_29155725_29155857_29160732_29160868_29165661_29165773_29167372_29167586_29176067_29176180_29177465_29177579_29180103_29180239_29181918_29182007_29186291_29186473_29188514_29188608_29190996_29191058_29196186_29196200_29245345_29245440_29262979
transcript_135597.known	chr8	-	5553	4	FSM	ENSG00000120875.9	ENST00000240100.7	5553	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	3.77123616632825	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGCTTGGTTAGACCT	-29350207	True	NA	-1	True	AATAAA	-15	NA	29350684	29333063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_29337412_29338281_29338502_29340097_29340244_29349845
transcript_135598.known	chr8	-	1803	5	FSM	ENSG00000133872.14	ENST00000520303.5	1803	5	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	259.908036620648	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAGAATCAATAAA	-30083120	False	NA	-51	True	NA	NA	NA	30083153	30063129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30082846
transcript_13560.known	chr1	+	3496	2	FSM	ENSG00000229191.1	ENST00000458003.1	3496	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAACTTACAAGTTGTGTG	201023651	True	NA	8	True	AATAAA	-18	NA	201023960	201028792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201024086_201025421
transcript_135600.known	chr8	-	1981	6	FSM	ENSG00000133872.14	ENST00000518174.5	1981	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	300.864487768164	1353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTCTCATTCTTTCTA	-30083091	False	NA	-19	True	AATAAA	-13	NA	30083124	30063097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30063914_30065987_30066140_30066776_30066919_30069641_30070060_30073876_30074052_30082846
transcript_135607.known	chr8	+	589	3	FSM	ENSG00000104660.19	ENST00000518001.1	589	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	315.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTGAAGGATTAAAAGGAT	30088582	True	NA	-17	True	NA	NA	NA	30095409	30106028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30095529_30104299_30104487_30105745
transcript_135609.known	chr8	-	396	1	FSM	ENSG00000241511.1	ENST00000492525.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTAATGCAGCATATAT	NA	False	NA	NA	False	AAAACA	-35	NA	30117779	30117383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30117400_30117800
transcript_135610.known	chr8	-	403	1	FSM	ENSG00000271869.1	ENST00000607315.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	230	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCGCGTCATTATGCCCT	-30156029	True	NA	-2	True	AATAAA	-19	NA	30156232	30155829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30155800_30156200
transcript_135611.known	chr8	+	1054	7	FSM	ENSG00000104671.8	ENST00000221114.8	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	26.1241693116207	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTTGTGGATTTGTAGC	30153574	True	NA	7	True	ATTAAA	-19	NA	30156368	30183639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487_30180631_30183074
transcript_135612.known	chr8	+	880	6	FSM	ENSG00000104671.8	ENST00000520829.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	18.7296556295091	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAATAAATAAAAA	30153574	True	NA	NA	False	NA	NA	NA	30156368	30181021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30156407_30164110_30164176_30175084_30175191_30177125_30177215_30179407_30179456_30180487
transcript_135613.known	chr8	+	1646	1	FSM	ENSG00000127589.4	ENST00000518096.1	1646	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTGGAAAAAAAAAAAAAAAA	NA	False	NA	83	True	AATAAA	-11	NA	30351872	30353518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30351900_30353500
transcript_135624.known	chr8	+	2874	9	FSM	ENSG00000157110.16	ENST00000397323.9	2874	9	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_8	396.069122755107	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCATTGCTTGACAAATTC	30374733	True	NA	25	True	AATAAA	-20	NA	30384540	30572256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_135625.nic	chr8	+	946	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	579.940298651508	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	30385183	False	NA	27	True	AATAAA	-24	NA	30385201	30570757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_13563.known	chr1	-	545	6	FSM	ENSG00000116857.17	ENST00000414605.2	545	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	503.553214665541	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	-201147093	True	NA	NA	False	NA	NA	NA	201154464	201135800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153782_201153960_201154444
transcript_135635.nic	chr8	+	1008	9	NIC	ENSG00000157110.16	novel	839	9	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	564.792868558908	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	30441798	True	NA	27	True	AATAAA	-24	NA	30442549	30570757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30558886_30558957_30566256_30566361_30570636
transcript_13564.known	chr1	-	938	6	FSM	ENSG00000116857.17	ENST00000485839.6	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	473.699229469502	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGGGCTACTTCTCCCTT	-201147062	True	NA	NA	False	NA	NA	NA	201154433	201135598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154147
transcript_135657.known	chr8	+	1341	7	FSM	ENSG00000157110.16	ENST00000339877.8	1341	7	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_6	339.027366971393	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30384297	False	NA	NA	False	AATAAA	-28	NA	30384510	30547522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30385159_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_135658.known	chr8	+	842	7	FSM	ENSG00000157110.16	ENST00000520161.5	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	642.914889822561	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTCAATAAAAATTTTAA	30385184	False	NA	NA	False	NA	NA	NA	30385202	30547483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30385391_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_135661.known	chr8	+	780	7	FSM	ENSG00000157110.16	ENST00000519647.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_1	641.332142237286	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATTTTAATCAGAGCAA	30387163	True	NA	NA	False	NA	NA	NA	30387207	30547492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30387325_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_135666.nic	chr8	+	944	7	NIC	ENSG00000157110.16	novel	1613	6	NA	NA	-67	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	623.085712848205	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAGACTGCAGCGTTTTG	30441798	True	NA	NA	False	AATAAA	-28	NA	30442549	30547522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493_30544625_30547291
transcript_13567.known	chr1	-	507	6	FSM	ENSG00000116857.17	ENST00000435310.5	507	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	480.431306223897	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGCTGCTGCATCCCT	-201147047	False	NA	NA	False	NA	NA	NA	201154418	201135800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201154361
transcript_13568.known	chr1	-	1544	6	FSM	ENSG00000116857.17	ENST00000367332.5	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	485.806710534138	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCTGGTTTTTAAGAGA	-201147130	True	NA	-6	True	ATTAAA	-17	NA	201154501	201134772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153848_201153960_201154444
transcript_135681.known	chr8	+	494	2	FSM	ENSG00000157110.16	ENST00000522099.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTAGACTGCAGCGTT	30545184	False	NA	NA	False	AATAAA	-25	NA	30545199	30547519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30545466_30547291
transcript_135682.known	chr8	+	1613	6	FSM	ENSG00000157110.16	ENST00000520191.5	1613	6	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	639.836041498133	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGGCTGGGTGAAATAAACA	30441865	True	NA	NA	False	NA	NA	NA	30442616	30545591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30442801_30474778_30474857_30477798_30477838_30479314_30479378_30504285_30504437_30544493
transcript_135683.known	chr8	+	453	4	FSM	ENSG00000157110.16	ENST00000523104.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	375.367375602444	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATTGTAAGAAATAGCGT	30556620	False	NA	27	True	AATAAA	-24	NA	30556636	30570757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30556795_30558886_30558957_30566256_30566361_30570636
transcript_135685.nic	chr8	-	952	4	NIC	ENSG00000254109.6	novel	1031	4	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	58.925565098879	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGGACTTTGTCC	-30384755	True	NA	NA	False	AATAAA	-24	NA	30384784	30382123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_30382616_30383127_30383363_30383543_30383698_30384713
transcript_135687.nic	chr8	-	802	3	NIC	ENSG00000254109.6	novel	909	3	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	60.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGACTTTGTCCATTGT	-30384844	False	NA	NA	False	AATAAA	-29	NA	30384864	30382118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_30382616_30383543_30383698_30384713
transcript_135688.known	chr8	-	754	3	FSM	ENSG00000254109.6	ENST00000523643.5	754	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAAGCCAGGACTTTGTCC	-30384720	False	NA	NA	False	AATAAA	-24	NA	30384740	30382123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30382616_30383127_30383363_30384713
transcript_13569.known	chr1	-	1564	6	FSM	ENSG00000116857.17	ENST00000367333.6	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	501.034928922126	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201171550	True	NA	-5	True	ATTAAA	-18	NA	201171574	201134771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857_201153960_201171489
transcript_135694.known	chr8	-	1747	8	FSM	ENSG00000197265.9	ENST00000355904.9	1747	8	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	18.3647844017415	351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAATGTTTTCTTTTAA	-30655616	True	NA	1	True	AATAAA	-17	NA	30658236	30578317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30579038_30580280_30580397_30607056_30607151_30612298_30612482_30614607_30614716_30635031_30635124_30653432_30653603_30657972
transcript_135703.known	chr8	+	1451	8	FSM	ENSG00000104691.16	ENST00000265616.10	1451	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	4.67297920965604	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743170	True	NA	27	True	AATAAA	-38	NA	30744163	30767006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_135706.known	chr8	+	1624	8	FSM	ENSG00000104691.16	ENST00000380154.9	1624	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	13.5269949300181	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743180	True	NA	27	True	AATAAA	-38	NA	30744173	30767006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744461_30751395_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_135708.known	chr8	+	702	8	FSM	ENSG00000104691.16	ENST00000615729.4	702	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.914311361867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAAGGGAGAGCTCCCT	30743196	True	NA	-75	True	NA	NA	NA	30744189	30766394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744278_30751506_30751519_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_135712.known	chr8	+	1202	7	FSM	ENSG00000104691.16	ENST00000341403.9	1202	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	15.1986841535707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATAATTTTGCCTTGTATT	30743195	True	NA	-74	True	NA	NA	NA	30744188	30766905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_30744278_30751395_30751519_30753034_30753106_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_135716.nnic	chr8	+	1334	7	NIC	ENSG00000104691.16	novel	1451	8	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	16.3749469888879	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATCTATCTCATCATTT	30743164	True	NA	27	True	AATAAA	-38	NA	30744157	30767006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_30744278_30753034_30753106_30754664_30754788_30756764_30756888_30760887_30760930_30763272_30763348_30766226
transcript_135720.known	chr8	-	1946	7	FSM	ENSG00000104695.13	ENST00000221138.9	1946	7	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_4	25.0183266160362	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTTATTGTGTTGTG	-30806465	True	NA	NA	False	AATAAA	-21	NA	30812818	30785615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30786308_30791196_30791316_30793916_30794079_30794191_30794282_30797580_30797755_30799545_30799756_30812319
transcript_135730.known	chr8	-	2218	2	FSM	ENSG00000172733.12	ENST00000523392.2	2218	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTATACTTTATGCTTC	-31032688	True	NA	NA	False	AATATA	-13	NA	31033356	31030849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_31032789_31033077
transcript_135731.known	chr8	-	2693	2	FSM	ENSG00000172733.12	ENST00000339382.3	2693	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTTGGATTCTTAATTA	NA	False	NA	-2	True	AATAAA	-18	NA	31033715	30995801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_30996698_31031918
transcript_135732.known	chr8	+	7575	35	FSM	ENSG00000165392.11	ENST00000298139.7	7575	35	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	16.4021688159985	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCACTGCTTTGACCTTTT	31027312	True	NA	NA	False	ATTAAA	-27	NA	31033809	31176138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866_31081297_31083698_31083780_31085165_31085247_31087775_31087921_31088889_31088966_31090464_31090533_31090833_31090943_31091829_31091899_31096767_31096851_31100848_31100956_31111614_31111800_31116353_31116529_31120242_31120425_31124521_31124624_31124907_31125001_31132364_31132507_31141429_31141601_31141680_31141776_31142625_31142702_31143549_31143624_31147052_31147129_31147363_31147477_31150340_31150456_31154623_31154756_31157367_31157531_31167021_31167231_31172994
transcript_135736.nic	chr8	+	1756	9	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-36	94631	-14	-3721	5prime_fragment	FALSE	canonical	3	86	junction_4	12.3995967676372	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGGGCCACATTTGGC	31027276	True	NA	NA	False	AATAAA	-19	NA	31033773	31081507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172_31076288_31080866
transcript_135739.nic	chr8	+	1439	8	ISM	ENSG00000165392.11	ENST00000298139.7	7575	35	-36	99527	-14	-8617	5prime_fragment	FALSE	canonical	3	86	junction_4	13.1800715367666	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAGATTCAAAGTTGTCA	31027276	True	NA	NA	False	AATAAA	-20	NA	31033773	31076611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_31033974_31058371_31058544_31059152_31059266_31064288_31064435_31064914_31065064_31067032_31067183_31068257_31068328_31076172
transcript_135744.known	chr8	+	1703	7	FSM	ENSG00000157168.20	ENST00000650919.1	1703	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_4	2.7938424357067	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTGCATTGAGGCATTT	32548056	True	NA	36	True	AATAAA	-42	NA	32548234	32743253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32548827_32595827_32596006_32605561_32605684_32614513_32614565_32616834_32616886_32727948_32728079_32742674
transcript_135746.known	chr8	+	1945	3	FSM	ENSG00000157168.20	ENST00000520502.7	1945	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACATAATAAAAGGAGT	32647085	True	NA	-10	True	NA	NA	NA	32647102	32743207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32648385_32727948_32728079_32742674
transcript_135747.known	chr8	+	927	5	FSM	ENSG00000247134.8	ENST00000666221.1	927	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	133.642246314554	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	32922414	True	NA	24	True	AATAAA	-21	NA	32928000	33044855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32951027_32951120_32996200_32996317_33041634_33041772_33044366
transcript_135748.known	chr8	+	1477	4	FSM	ENSG00000247134.8	ENST00000666042.1	1477	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	16.3571255285137	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922334	True	NA	23	True	AGTAAA	-1	NA	32927920	33045445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041744_33044366
transcript_135750.nic	chr8	+	649	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	-7	241	2	0	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	32922359	True	NA	22	True	AATAAA	-19	NA	32927945	33044614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_135751.nic	chr8	+	890	4	FSM	ENSG00000247134.8	ENST00000685531.1	883	4	-7	0	2	0	multi-exon	FALSE	canonical	3	68	junction_2	116.312796659124	584	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGGGAGTCTGAATTAG	32922359	True	NA	24	True	AATAAA	-21	NA	32927945	33044855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33041634_33041772_33044366
transcript_135753.known	chr8	+	657	4	FSM	ENSG00000247134.8	ENST00000670899.1	657	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	136.675609463511	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTCATACATATATAT	32922390	True	NA	22	True	AATAAA	-19	NA	32927976	33044614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996356_33041634_33041772_33044366
transcript_135757.known	chr8	+	1314	3	FSM	ENSG00000247134.8	ENST00000666659.1	1314	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	99	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922381	True	NA	23	True	AGTAAA	-1	NA	32927967	33045445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_33041634_33041744_33044366
transcript_135759.known	chr8	+	1397	3	FSM	ENSG00000247134.8	ENST00000659524.1	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	38.5	2546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCCATCACCCAATCCA	32922326	True	NA	23	True	AGTAAA	-1	NA	32927912	33045445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_33041634_33041772_33044366
transcript_135761.known	chr8	+	1277	3	FSM	ENSG00000247134.8	ENST00000657565.1	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	38	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTACCCCAGCCAAACACT	32922390	True	NA	-12	True	NA	NA	NA	32927976	33045410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_32996200_32996317_33044366
transcript_135764.known	chr8	+	634	2	FSM	ENSG00000247134.8	ENST00000664284.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACTTCAGGGAGTCTGA	32922357	True	NA	19	True	AATAAA	-45	NA	32927943	33044850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_32928094_33044366
transcript_135771.known	chr8	-	3549	5	FSM	ENSG00000172728.16	ENST00000327671.10	3549	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	19.0705925445435	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGAGTTGTGTTTTTT	-33471499	True	NA	NA	False	TATAAA	-2	NA	33473146	33370823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33372805_33388962_33389799_33453215_33453511_33461371_33461726_33473063
transcript_135774.nnic	chr8	-	1459	4	NIC	ENSG00000172728.16	novel	3549	5	NA	NA	-1	0	intron_retention	FALSE	canonical	2	26	junction_1	46.4494946749214	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTATCCACTCTTCAAG	-33471500	True	NA	-32	True	AATAAA	-17	NA	33473147	33372078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_33372805_33453215_33453511_33461371_33461726_33473063
transcript_135777.known	chr8	-	2187	3	FSM	ENSG00000172728.16	ENST00000416169.5	2187	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	11.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATCCAGTCTTGGGTA	-33471466	True	NA	NA	False	ATTAAA	-15	NA	33473113	33451727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33453511_33461371_33461726_33473063
transcript_135782.known	chr8	+	3561	10	FSM	ENSG00000198042.11	ENST00000360128.11	3561	10	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	27.4307208152546	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTGACTGGGAGAAAAAA	33477070	True	NA	27	True	AATAAA	-18	NA	33485181	33501262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231_33497298_33498431
transcript_135787.nic	chr8	+	810	9	ISM	ENSG00000198042.11	ENST00000360128.11	3561	10	-26	3911	-26	-1295	5prime_fragment	FALSE	canonical	3	243	junction_1	29.0729148005493	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAACAGGGAGGTGG	33477044	True	NA	NA	False	AAAAAG	-34	NA	33485155	33497351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_33485222_33488377_33488428_33488519_33488630_33488733_33488799_33488987_33489140_33490284_33490340_33495541_33495617_33496624_33496742_33497231
transcript_135792.known	chr8	-	2516	8	FSM	ENSG00000129696.13	ENST00000613904.1	2516	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	112.840505102719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTTTCTTCCTCCTCCTC	NA	False	NA	NA	False	NA	NA	NA	33513185	33498508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33512959
transcript_135793.known	chr8	-	2131	8	FSM	ENSG00000129696.13	ENST00000431156.7	2131	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	80.3416175478443	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAAACTGGAGGTGTGTA	-33510830	True	NA	-5	True	AATAAA	-35	NA	33513135	33498721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966_33512713_33513081
transcript_13580.known	chr1	-	1994	5	FSM	ENSG00000116857.17	ENST00000367330.6	1994	5	0	0	0	0	multi-exon	FALSE	canonical	3	1148	junction_4	75.1976562134752	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGGTTTTTAAGAGAT	-201147103	True	NA	-5	True	ATTAAA	-18	NA	201154474	201134771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201135816_201143819_201143952_201146739_201146849_201151760_201151853_201153857
transcript_135801.nic	chr8	-	1695	7	NIC	ENSG00000129696.13	novel	2131	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	74	junction_4	119.062541921836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	NA	False	NA	-50	True	NA	NA	NA	33513188	33499117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966_33512713_33513081
transcript_135802.known	chr8	-	2242	7	FSM	ENSG00000129696.13	ENST00000360742.9	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	42.3936578065897	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAGTAATGTAGCATTT	-33510804	True	NA	-4	True	AATAAA	-19	NA	33513109	33498953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33507228_33507322_33509745_33509933_33511966
transcript_135803.known	chr8	-	1588	6	FSM	ENSG00000129696.13	ENST00000520636.5	1588	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_4	109.806375042618	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGGAGTTATTTAAGAAAA	-33510407	False	NA	-50	True	NA	NA	NA	33512712	33499117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33499278_33500327_33500491_33503428_33503573_33503747_33503936_33509745_33509933_33511966
transcript_135804.known	chr8	+	104	1	FSM	ENSG00000239039.1	ENST00000459299.1	104	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACTTCAAGGATCGATTT	33513286	True	NA	21	True	NA	NA	NA	33513474	33513578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_33513500_33513600
transcript_135805.known	chr8	-	1872	6	FSM	ENSG00000133874.2	ENST00000256257.2	1872	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.92341345003647	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGCTTGTGGTTGTGGC	-33564286	True	NA	-1	True	AATAAA	-26	NA	33567128	33547753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33548868_33549409_33549493_33551043_33551086_33551343_33551390_33558614_33558772_33566698
transcript_135806.known	chr8	-	1754	4	FSM	ENSG00000133878.9	ENST00000256261.9	1754	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.6144555520604	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGTTTCTTGAAGTCATT	NA	False	NA	-1	True	AATAAA	-16	NA	33600023	33591329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33592213_33593532_33593748_33597294_33597592_33599664
transcript_135807.known	chr8	-	313	1	FSM	ENSG00000188512.6	ENST00000523393.1	313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAATAATTGGCCACTGC	NA	False	NA	NA	False	AAAAAG	-9	NA	33969879	33969566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_33969600_33969900
transcript_135808.known	chr8	+	475	1	FSM	ENSG00000243181.2	ENST00000477341.2	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAGGTGTTAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	34874158	34874633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_34874200_34874600
transcript_135810.known	chr8	-	510	2	FSM	ENSG00000253414.3	ENST00000521989.2	510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTGTGTGCCTCTGGT	NA	False	NA	NA	False	AATAAA	-14	NA	37517021	37516409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_37516701_37516802
transcript_135813.known	chr8	+	5387	12	FSM	ENSG00000147475.17	ENST00000519638.3	5387	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	11.6107673026106	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGCATACGAAGGGCTTT	37731475	True	NA	NA	False	AATAAA	-25	NA	37736633	37758422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625_37751716_37753449_37753530_37753914
transcript_13582.known	chr1	-	1165	17	FSM	ENSG00000118194.21	ENST00000656932.1	1165	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	12.6982712898252	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	-201377647	False	440	-5	True	AATAAA	-18	NA	201377680	201359013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_135824.known	chr8	+	1466	7	FSM	ENSG00000147475.17	ENST00000648919.1	1466	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	8.20568908339411	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTATCTCACTA	37731475	True	NA	NA	False	AGTAAA	-15	NA	37736633	37746550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570_37744697_37745568
transcript_135832.known	chr8	+	2347	6	FSM	ENSG00000147475.17	ENST00000523887.5	2347	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	6.34350061086148	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGTTTATCTCACTA	37731466	True	NA	NA	False	AGTAAA	-15	NA	37736624	37746550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37740364_37740447_37741771_37741819_37744354_37744417_37744570
transcript_135841.nnic	chr8	+	494	4	NNC	ENSG00000147475.17	novel	2347	6	NA	NA	-25	682	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.5143607047182	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATAGGGTTTGGTAC	37731417	True	NA	NA	False	ATTAAA	-15	NA	37736575	37741396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_37736679_37737907_37738030_37740364_37740447_37741209
transcript_135842.known	chr8	+	663	8	FSM	ENSG00000147475.17	ENST00000518526.5	663	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	12.6716782065924	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCAGAAATTGAAGGT	37731464	True	NA	NA	False	NA	NA	NA	37736622	37751697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37736679_37737907_37738030_37744354_37744417_37744570_37744697_37749558_37749633_37749793_37749853_37750394_37750487_37751625
transcript_135843.known	chr8	+	2507	8	FSM	ENSG00000147471.12	ENST00000328195.8	2507	8	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_7	73.976554476705	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTGTAGTGACTGAATA	37754276	True	NA	17	True	ATTAAA	-18	NA	37762644	37779768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754_37772890_37775338_37775482_37775917_37776017_37777972
transcript_135848.known	chr8	+	559	5	FSM	ENSG00000147471.12	ENST00000523994.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	167.847400933109	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAGTAAGTATAGTAAAG	37754286	True	NA	NA	False	AATAAA	-28	NA	37762654	37766716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37766481
transcript_135856.known	chr8	+	770	4	FSM	ENSG00000147471.12	ENST00000520073.5	770	4	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	28.7672653471886	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGAATTATAGTAAAGTA	37754226	True	NA	NA	False	AATAAA	-36	NA	37762594	37766741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279
transcript_135864.known	chr8	+	516	5	FSM	ENSG00000147471.12	ENST00000523358.5	516	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	62.88083968905	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTAACCAGACCTGAATTG	37754231	True	NA	NA	False	NA	NA	NA	37762599	37772891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_37762759_37765525_37765634_37765710_37765747_37766279_37766356_37772754
transcript_135866.known	chr8	-	1192	5	FSM	ENSG00000104221.13	ENST00000520601.5	1192	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	52.7967802048572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGGCCAGTCCTGCCCTT	-37847595	True	NA	NA	False	NA	NA	NA	37849838	37844701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_37845214_37845685_37845775_37846853_37847176_37848595_37848656_37849629
transcript_13587.known	chr1	-	1330	16	FSM	ENSG00000118194.21	ENST00000509001.5	1330	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.8123937904413	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCCACCACACACTGA	-201377729	False	440	-25	True	NA	NA	NA	201377762	201359033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373402_201377622
transcript_135872.nnic	chr8	-	492	4	Antisense	novelGene_ENSG00000020181.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1.4142135623731	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCCTCTGTGCTGTCTCTG	-37800303	True	NA	-21	True	AATAAA	-13	NA	37800315	37790316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_-_37790487_37790830_37790940_37794504_37794592_37800189
transcript_135874.known	chr8	-	2560	4	FSM	ENSG00000104221.13	ENST00000220659.11	2560	4	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_3	6.34209919681348	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTAGGGAGATGGGTCTT	-37847618	True	NA	NA	False	NA	NA	NA	37849861	37843267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_37845214_37846853_37847176_37848595_37848656_37849629
transcript_135879.nnic	chr8	+	1028	3	NNC	ENSG00000187840.5	novel	827	3	NA	NA	-565	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	1485.5	2275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	NA	False	NA	19	True	AATAAA	-26	NA	38029968	38060365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_38030355_38057080_38057261_38059903
transcript_135883.known	chr8	+	827	3	FSM	ENSG00000187840.5	ENST00000338825.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	2884	junction_1	59.5	7940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCCCGTCTGAGCTT	38006138	True	NA	19	True	AATAAA	-26	NA	38030533	38060365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38030719_38057080_38057261_38059903
transcript_135886.known	chr8	+	2918	16	FSM	ENSG00000129691.16	ENST00000343823.11	2918	16	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_1	32.1890250447778	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	38097796	True	NA	NA	False	ATTAAA	-38	NA	38105528	38140080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38105739_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_135887.known	chr8	+	2678	16	FSM	ENSG00000129691.16	ENST00000428278.6	2678	16	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	85.5473877775093	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38098060	False	NA	8	True	AATAAA	-18	NA	38105792	38139703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38135667_38135767_38138815_38138876_38138963
transcript_135890.known	chr8	+	2433	15	FSM	ENSG00000129691.16	ENST00000521652.5	2433	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_13	126.874777570932	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACACTTTGCTTCCCTT	38104969	False	NA	8	True	AATAAA	-18	NA	38105938	38139703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38106140_38106377_38106445_38107020_38107167_38110378_38110468_38110738_38110834_38114191_38114288_38114904_38115001_38116649_38116726_38119269_38119364_38120931_38121150_38128290_38128459_38128757_38128952_38133453_38133547_38138815_38138876_38138963
transcript_135901.known	chr8	-	2565	7	FSM	ENSG00000147465.12	ENST00000276449.9	2565	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	5.39804491356722	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGAGCTGGGCGTGGTG	-38150857	False	NA	NA	False	ACTAAA	-6	NA	38150952	38142699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38144387_38145221_38145316_38145962_38146148_38146288_38146448_38148199_38148328_38148640_38148755_38150754
transcript_135908.known	chr8	+	4197	5	FSM	ENSG00000156735.11	ENST00000287322.5	4197	5	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	34.1933838629639	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGTTTTTTTTTTTTTAT	38167893	True	NA	NA	False	AATAAA	-30	NA	38176854	38213301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38177140_38192687_38192796_38207511_38207767_38209012_38209268_38210007
transcript_135913.known	chr8	+	1943	4	FSM	ENSG00000156735.11	ENST00000432471.6	1943	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	85.7956227839678	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCACATTTTTGTACAT	38176317	False	NA	NA	False	TTTAAA	-12	NA	38176587	38210888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38177140_38207511_38207767_38209012_38209268_38210007
transcript_135916.known	chr8	-	1568	4	FSM	ENSG00000175324.10	ENST00000522515.5	1568	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	277.860076697287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATATGAATCTCAAAA	-38175542	True	NA	-36	True	NA	NA	NA	38176716	38163358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38175815
transcript_135919.known	chr8	-	776	4	FSM	ENSG00000175324.10	ENST00000520286.5	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	264.670864786184	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACTTCTTTATATTGTTC	-38175556	True	NA	-105	True	AAGAAA	-42	NA	38176730	38163427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176552
transcript_13593.known	chr1	-	1156	16	FSM	ENSG00000118194.21	ENST00000422165.6	1156	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	12.2074658394862	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCATTTCTGTCACGTCC	-201377647	False	440	-5	True	AATAAA	-18	NA	201377680	201359013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_135932.known	chr8	-	906	4	FSM	ENSG00000175324.10	ENST00000311351.9	906	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	29.3295452099452	3720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCATGTTATTTCCAAGT	-38170547	True	NA	-16	True	AATAAA	-16	NA	38176493	38163338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38169801_38169918_38171964_38172034_38176274
transcript_135933.known	chr8	-	975	3	FSM	ENSG00000175324.10	ENST00000520755.5	975	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	293.5	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTATTTCCAAGTTTGA	-38175500	False	NA	-12	True	AATAAA	-20	NA	38176674	38163334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38163841_38171964_38172034_38176274
transcript_135935.known	chr8	-	1524	2	FSM	ENSG00000147548.17	ENST00000528627.1	1524	2	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACAATCCTTAAATATTT	-38326820	False	18	-2	True	AATAAA	-19	NA	38326835	38319754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38321173_38326729
transcript_13595.known	chr1	-	2308	15	FSM	ENSG00000118194.21	ENST00000491504.5	2308	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	13.6366852157505	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTCACGTCCCCTTCA	-201377647	False	440	1	True	AATAAA	-24	NA	201377680	201359007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201362385_201362395_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_135955.known	chr8	-	794	5	FSM	ENSG00000147535.17	ENST00000419686.2	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	97.3354380480203	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTATGTGTCAGGTACT	-38263542	True	NA	-6	True	AATAAA	-18	NA	38269243	38266979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_135956.known	chr8	-	2134	7	FSM	ENSG00000147535.17	ENST00000424479.7	2134	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	177.161335761754	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAATGTGTGCTTTTTT	-38263523	True	NA	-10	True	AATAAA	-2	NA	38269224	38263129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_135957.known	chr8	-	496	3	FSM	ENSG00000147535.17	ENST00000530193.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	154	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAATGGTAAATGTGT	-38267269	False	NA	-18	True	AGTAAA	-11	NA	38267322	38263137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38263407_38266140_38266312_38267266
transcript_135958.known	chr8	-	853	7	FSM	ENSG00000147535.17	ENST00000422581.6	853	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	222.755783064972	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAAGTCTGGAATTGAGG	-38263506	True	NA	-6	True	AATAAA	-18	NA	38269207	38264738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264950_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268462_38268881_38268991_38269125
transcript_135959.known	chr8	-	831	7	FSM	ENSG00000147535.17	ENST00000524616.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	251.201556966159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCAACATGGTGAACCCT	-38263495	True	NA	NA	False	NA	NA	NA	38269196	38264350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38264605_38266140_38266312_38267266_38267392_38267896_38267961_38268370_38268408_38268881_38268991_38269125
transcript_135960.known	chr8	-	1590	3	FSM	ENSG00000147535.17	ENST00000528814.1	1590	3	0	0	0	0	multi-exon	FALSE	canonical	3	584	junction_2	96	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAATACCTTTAACGAAG	-38263529	True	NA	-27	True	NA	NA	NA	38269230	38267000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38267392_38267896_38268991_38269125
transcript_135962.known	chr8	+	1459	10	FSM	ENSG00000165046.13	ENST00000524874.5	1459	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.13058451009802	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTACTTGAGGATGGAG	38386287	True	NA	NA	False	NA	NA	NA	38386475	38408274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38386569_38387949_38388031_38392541_38392996_38400271_38400410_38400852_38401054_38402524_38402645_38404392_38404507_38406945_38407039_38407361_38407464_38408211
transcript_135966.known	chr8	-	826	6	FSM	ENSG00000077782.22	ENST00000484370.5	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	284.454987651825	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTGTGGAGAATGAGTAC	-38457318	True	NA	NA	False	NA	NA	NA	38457446	38426178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38426246_38427920_38428094_38428351_38428436_38429246_38429391_38429681_38429949_38457355
transcript_135967.known	chr8	+	2240	3	FSM	ENSG00000165046.13	ENST00000519476.6	2240	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATACTTTAGGGTCCAC	38386292	False	NA	17	True	ATTAAA	-30	NA	38386302	38394434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38386569_38387949_38388031_38392541
transcript_13597.known	chr1	-	1182	15	NNC	ENSG00000118194.21	novel	1156	16	NA	NA	-16	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_13	10.9702752369989	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTCACGTCCCCTTC	-201377667	False	440	0	True	AATAAA	-23	NA	201377700	201359008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201369815_201369846_201372026_201372046_201373205_201373269_201377622
transcript_135979.nnic	chr8	-	386	3	NIC	ENSG00000253361.3	novel	1635	4	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGGGGTTTTTGTTGTT	NA	False	NA	NA	False	TTTAAA	-7	NA	38553810	38543651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_38543847_38544083_38544180_38553715
transcript_135980.known	chr8	-	537	5	FSM	ENSG00000253361.3	ENST00000519764.1	537	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCCAGCATTCCTT	NA	False	NA	NA	False	AATAAA	-15	NA	38559020	38552247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38552381_38552958_38553092_38553715_38553869_38554888_38554956_38558969
transcript_135983.known	chr8	+	4112	22	FSM	ENSG00000168615.13	ENST00000487273.7	4112	22	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_18	27.4217087975692	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGTCCATCGTTTCATT	38992513	True	NA	NA	False	ATTAAA	-20	NA	38996972	39105261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091258_39091347_39101862_39101931_39103606
transcript_135987.nnic	chr8	+	660	5	NNC	ENSG00000168615.13	novel	2053	5	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	65.49236596734	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGACTGGCCTAAAGTAAT	38992445	True	NA	NA	False	AATAAA	-18	NA	38996904	39016019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39015851
transcript_135988.known	chr8	+	3894	22	FSM	ENSG00000168615.13	ENST00000677359.1	3894	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	40.7923228738224	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATTTACAATAAATAAAAT	38992454	True	NA	-24	True	AATACA	-1	NA	38996913	39104968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_38997161_39007885_39007984_39011657_39011717_39013964_39014044_39016117_39016195_39017218_39017415_39018852_39018919_39021642_39021715_39023155_39023326_39025802_39025885_39026676_39026811_39041945_39042118_39054480_39054574_39055576_39055773_39071297_39071404_39077227_39077412_39082640_39082722_39082967_39083074_39090046_39090189_39091242_39091347_39101862_39101931_39103606
transcript_135993.known	chr8	-	469	4	FSM	ENSG00000169490.17	ENST00000522434.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	271.825107171668	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAAGTGATGGCAGCA	-38986744	True	NA	NA	False	NA	NA	NA	38996509	38991371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996418
transcript_135995.known	chr8	-	3295	4	FSM	ENSG00000169490.17	ENST00000456845.6	3295	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	284.51869690565	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986718	True	NA	0	True	AATAAA	-21	NA	38996483	38988807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995694_38996418
transcript_135996.known	chr8	-	1631	4	FSM	ENSG00000169490.17	ENST00000397070.6	1631	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	264.30453815417	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTACTGTATGAGTATTTTC	-38986744	True	NA	-8	True	AATAAA	-15	NA	38996509	38990804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996212
transcript_136007.known	chr8	-	885	4	FSM	ENSG00000169490.17	ENST00000522142.1	885	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	289.691023141707	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGATCGATTCTGTTTGG	NA	False	NA	NA	False	NA	NA	NA	38996824	38991485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995795_38996592
transcript_13601.known	chr1	-	1108	15	FSM	ENSG00000118194.21	ENST00000412633.3	1108	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	12.6686580962304	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGGCATTTCTGTCAC	-201377633	False	440	-9	True	AATAAA	-14	NA	201377666	201359017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365190_201365308_201365609_201365671_201366837_201366872_201367770_201367807_201368161_201368228_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_136011.known	chr8	-	3239	4	FSM	ENSG00000169490.17	ENST00000456397.7	3239	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_3	77.6831169989121	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTGGCACTGTGTTCTT	-38986744	True	NA	0	True	AATAAA	-21	NA	38996509	38988807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_38991546_38993544_38993661_38995317_38995406_38996212
transcript_136012.known	chr8	+	1429	6	FSM	ENSG00000168619.16	ENST00000520772.5	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGTTTCAGGTAAGA	NA	False	NA	NA	False	AATAAA	-18	NA	39584584	39611575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39584678_39585275_39585353_39606306_39606363_39609041_39609121_39609484_39609562_39610528
transcript_136014.nic	chr8	+	1777	12	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	70.7395408850531	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	39901451	True	NA	12	True	AATAAA	-17	NA	39902310	39928426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_136017.nnic	chr8	+	1791	11	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	-126	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_8	65.173921164834	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	NA	False	NA	12	True	AATAAA	-17	NA	39902148	39928426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_136019.nnic	chr8	+	1632	10	NIC	ENSG00000131203.13	novel	1709	12	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	84.9234949822486	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	39901444	True	NA	12	True	AATAAA	-17	NA	39902303	39928426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918945_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_13602.known	chr1	-	1007	15	FSM	ENSG00000118194.21	ENST00000367320.6	1007	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.1947101385822	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACACTGACTGGCATTTC	-201377628	False	440	-15	True	AATAAA	-8	NA	201377661	201359023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201359256_201359622_201359664_201361278_201361370_201361912_201362023_201363295_201363407_201364297_201364376_201365609_201365671_201366837_201366872_201367770_201367804_201368161_201368228_201369815_201369846_201372026_201372042_201372144_201372156_201373213_201373269_201377622
transcript_136026.nnic	chr8	+	437	4	NNC	ENSG00000131203.13	novel	612	5	NA	NA	-5	-2208	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_3	94.9818696149721	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	39901410	True	NA	NA	False	AATAAA	-26	NA	39902269	39915721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_39902449_39913888_39914010_39914193_39914246_39915636
transcript_136031.nnic	chr8	+	346	3	NIC	ENSG00000131203.13	novel	612	5	NA	NA	29	-2213	combination_of_known_splicesites	FALSE	canonical	3	21	junction_2	128.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAACTTTGTATCATGGGT	39901444	True	NA	NA	False	AATAAA	-21	NA	39902303	39915716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_39902449_39913888_39914010_39915636
transcript_136034.known	chr8	+	1709	12	FSM	ENSG00000131203.13	ENST00000522495.5	1709	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	59.7887465571577	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGCATAAGATATATT	39901515	True	NA	12	True	AATAAA	-17	NA	39902374	39928426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39902449_39913000_39913149_39913888_39914010_39917874_39917971_39918087_39918208_39918814_39918934_39920099_39920115_39922551_39922652_39923468_39923587_39924720_39924773_39925222_39925372_39927829
transcript_136035.known	chr8	+	102	2	FSM	ENSG00000253838.1	ENST00000520185.1	102	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTATCATGGGTTTTGT	NA	False	NA	NA	False	AATAAA	-26	NA	39914228	39915721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39914246_39915636
transcript_136036.known	chr8	+	1525	9	FSM	ENSG00000131203.13	ENST00000253513.11	1525	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.7558526136917	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCGGCTGGGCGCGGT	NA	False	NA	30	True	AATAAA	-35	NA	39913868	39928444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_39914010_39917874_39917971_39918087_39918208_39918814_39918945_39922551_39922652_39923468_39923591_39924720_39924773_39925222_39925372_39927829
transcript_136040.known	chr8	-	2471	7	FSM	ENSG00000165061.15	ENST00000297737.11	2471	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	9.62635271879577	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-40895719	True	NA	NA	False	AGTAAA	-20	NA	40897826	40530589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40532239_40581164_40581262_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_136046.nnic	chr8	-	2424	6	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	-43	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	17.9488161169477	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	40897876	40530589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_40532239_40674703_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_136047.known	chr8	-	2250	6	FSM	ENSG00000165061.15	ENST00000315769.11	2250	6	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_2	15.5897402159241	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTTTCAGTTTGGGTTT	-40895726	True	NA	NA	False	AGTAAA	-20	NA	40897833	40530589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40532239_40581164_40581262_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_136053.nic	chr8	-	1398	6	NIC	ENSG00000165061.15	novel	2471	7	NA	NA	-1	271	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	21.7752152687407	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGATAA	-40895718	True	NA	NA	False	TTTAAA	-10	NA	40897825	40674092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_40674932_40697244_40697402_40767640_40767731_40808508_40808572_40825574_40825681_40897682
transcript_136055.nic	chr8	-	1386	5	ISM	ENSG00000165061.15	ENST00000297737.11	2471	7	-50	143503	-43	271	5prime_fragment	FALSE	canonical	3	29	junction_1	8.15475321515004	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAGATGATAA	NA	False	NA	NA	False	TTTAAA	-10	NA	40897876	40674092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_40674932_40697244_40697402_40767640_40767731_40825574_40825681_40897682
transcript_136057.known	chr8	-	564	5	FSM	ENSG00000165061.15	ENST00000523188.5	564	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	22.0737400546441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGACCCCATTAAAGAC	-40895717	True	NA	NA	False	NA	NA	NA	40897824	40697269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40697402_40767640_40767731_40786688_40786783_40825574_40825681_40897682
transcript_136058.known	chr8	-	515	5	FSM	ENSG00000165061.15	ENST00000523542.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.2525771826418	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAGAAGACCCCATTAA	-40895703	True	NA	NA	False	NA	NA	NA	40897810	40697273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_40697402_40767640_40767731_40808508_40808572_40825574_40825681_40897682
transcript_13606.known	chr1	-	2627	10	FSM	ENSG00000159166.15	ENST00000391967.7	2627	10	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_3	19.0904280843685	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGATTGACTGCCCTA	-201397398	True	NA	0	True	TTTAAA	-15	NA	201399324	201380832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201381894_201382251_201382327_201382652_201382740_201383073_201383212_201383316_201383390_201384791_201384836_201385700_201385806_201386334_201387179_201389159_201389304_201399268
transcript_136060.nic	chr8	-	2006	4	ISM	ENSG00000165061.15	ENST00000315769.11	2250	6	-43	165196	-43	1210	5prime_fragment	FALSE	canonical	3	38	junction_2	4.96655480858378	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAATTG	NA	False	NA	NA	False	NA	NA	NA	40897876	40695785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_40697402_40767640_40767731_40825574_40825681_40897682
transcript_136062.known	chr8	-	4464	3	FSM	ENSG00000104332.12	ENST00000220772.8	4464	3	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	22.5	270	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTGTGAGCTGTGACT	-41295946	True	NA	-17	True	ACTAAA	-18	NA	41309473	41261961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41265490_41303460_41303539_41308615
transcript_136067.known	chr8	+	6298	13	FSM	ENSG00000158669.11	ENST00000396987.7	6298	13	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	27.7648858972784	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTCTTTGATTTATTAAA	41573831	True	NA	NA	False	AATAAA	-17	NA	41578199	41625001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41578279_41598291_41599305_41609415_41609486_41609654_41609956_41610735_41610811_41611902_41611993_41612179_41612274_41612844_41612961_41614385_41614442_41614962_41615049_41618683_41618813_41618897_41618978_41620892
transcript_136088.known	chr8	+	3770	8	FSM	ENSG00000147536.12	ENST00000276533.4	3770	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_7	14.8804761828569	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGGAACAGGAAATGA	41523286	True	NA	12	True	AATAAA	-21	NA	41529260	41545030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41539677_41539776_41539915_41540005_41541808_41541900_41541990
transcript_136098.known	chr8	+	1903	6	FSM	ENSG00000147533.18	ENST00000405786.2	1903	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	265.097416056815	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAAGTTGTCTCTGTGTC	41481317	True	NA	NA	False	AATAAA	-10	NA	41490561	41510974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490618_41490832_41490966_41497508_41497662_41505910_41506013_41507053_41507122_41509583
transcript_136100.known	chr8	+	808	6	FSM	ENSG00000147533.18	ENST00000518270.5	808	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	263.602731397078	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTGTAGGACTCTGT	NA	False	NA	NA	False	NA	NA	NA	41490395	41509769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490567_41490832_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_136105.known	chr8	+	582	6	FSM	ENSG00000147533.18	ENST00000523420.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	264.77054216812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCAGAGCCACGGTGCCA	41481367	True	NA	NA	False	NA	NA	NA	41490611	41509673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490690_41490869_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_136106.known	chr8	+	835	6	FSM	ENSG00000147536.12	ENST00000520354.5	835	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	60.570619940694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTGTTGGTGGTGTGCACC	41523243	True	NA	NA	False	AATACA	-13	NA	41529217	41542239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179_41537294_41541808_41541900_41541990
transcript_136113.known	chr8	+	494	4	FSM	ENSG00000147536.12	ENST00000520631.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_3	0.942809041582063	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGATACCTGGAGGGATT	41523252	True	NA	NA	False	NA	NA	NA	41529226	41537301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41529397_41530183_41530299_41536359_41536447_41537179
transcript_136114.nnic	chr8	+	521	3	NNC	ENSG00000147536.12	novel	375	3	NA	NA	-45	-5144	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	67.5	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTCTATGTCCTGGAGT	NA	False	NA	5	True	AATAAA	-19	NA	41529172	41531308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_41529397_41530183_41530299_41531126
transcript_136119.known	chr8	+	1595	2	FSM	ENSG00000287535.1	ENST00000665362.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTGAGA	41566812	True	NA	NA	False	NA	NA	NA	41566857	41568641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41566924_41567112
transcript_13612.known	chr1	-	6110	9	FSM	ENSG00000159173.19	ENST00000361379.9	6110	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	0.695970545353753	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTGTAAACCTTACTT	-201421717	True	NA	NA	False	AATACA	-16	NA	201421730	201403783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415255_201417115_201417120_201417782_201417813_201421672
transcript_136121.known	chr8	+	2099	5	FSM	ENSG00000147533.18	ENST00000357743.9	2099	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	67.9535687068751	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTGTGTCATATTT	41481337	True	NA	NA	False	AATAAA	-16	NA	41490581	41510980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41490966_41497508_41497662_41505910_41506013_41507058_41507122_41509583
transcript_136122.known	chr8	+	2022	3	FSM	ENSG00000147536.12	ENST00000520710.5	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTGCAAAACATTCCTA	41523246	True	NA	NA	False	NA	NA	NA	41529220	41538036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41530299_41536359_41536447_41537179
transcript_136123.known	chr8	+	515	2	FSM	ENSG00000147536.12	ENST00000518430.1	515	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAAACTAGGCATAAACTCA	NA	False	NA	NA	False	AAAACA	-16	NA	41541803	41542409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_41541900_41541990
transcript_136124.known	chr8	-	1770	1	FSM	ENSG00000260588.1	ENST00000563810.1	1770	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCGACCGGGAACTCCAT	NA	False	NA	-7	True	ATTAAA	-15	NA	41829934	41828164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_41828200_41829900
transcript_136127.known	chr8	+	3669	10	FSM	ENSG00000070718.12	ENST00000518421.5	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	35.3022225019934	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTATGTCCTAAGTGGTT	NA	False	NA	23	True	AATAAA	-17	NA	42152945	42171182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42153106_42154477_42154537_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_136128.known	chr8	+	3494	9	FSM	ENSG00000070718.12	ENST00000396926.8	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	18.2581317499902	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATGTCCTAAGTGGTTT	42152646	True	NA	24	True	AATAAA	-18	NA	42153062	42171183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426_42165561_42167163_42167372_42167665_42167811_42168960
transcript_13613.known	chr1	-	6142	8	FSM	ENSG00000159173.19	ENST00000622580.4	6142	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	0.699854212223765	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTAAGTGCATGCATTTTG	-201421733	True	NA	NA	False	AATACA	-32	NA	201421746	201403767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201409251_201410325_201410436_201411356_201411534_201413031_201413122_201414517_201414650_201415212_201415259_201417782_201417813_201421672
transcript_136136.nic	chr8	+	1180	6	ISM	ENSG00000070718.12	ENST00000530375.5	1212	8	-65	3352	-9	0	5prime_fragment	FALSE	canonical	3	70	junction_1	22.1142488002645	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	42152603	True	NA	NA	False	AATAAA	-21	NA	42153019	42165779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_42153106_42154615_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_136144.known	chr8	+	478	3	FSM	ENSG00000070718.12	ENST00000520685.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGGAAAAGGTCACCAGG	42152612	True	NA	82	True	NA	NA	NA	42153028	42169216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42153106_42167665_42167811_42168960
transcript_136146.nic	chr8	+	538	2	ISM	ENSG00000070718.12	ENST00000530375.5	1212	8	-65	14064	-9	349	5prime_fragment	FALSE	canonical	3	70	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATTACTCACTTCC	42152603	True	NA	NA	False	AAGAAA	-21	NA	42153019	42155067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_42153106_42154615
transcript_136147.known	chr8	+	1094	5	FSM	ENSG00000070718.12	ENST00000517922.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	18.9538914210249	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAATAAGAGAATCTGAATAG	42154591	False	NA	NA	False	AATAAA	-21	NA	42154615	42165779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42154961_42157940_42158113_42162280_42162419_42165070_42165157_42165426
transcript_136149.known	chr8	-	3062	14	FSM	ENSG00000104368.19	ENST00000220809.9	3062	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.30858664117024	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCAACGAGGAGCCATGG	-42207292	True	NA	NA	False	GGGGCT	-39	NA	42207565	42174717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42188933_42189072_42191371_42191415_42193113_42193212_42207493
transcript_136150.known	chr8	-	2516	13	FSM	ENSG00000104368.19	ENST00000352041.7	2516	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	5.77530662966623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAGAGTGGAATGGTT	-42207657	False	NA	-8	True	AATAAA	-28	NA	42207676	42175236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42176152_42178896_42179064_42179925_42180067_42180241_42180379_42180489_42180686_42181936_42182023_42182718_42182891_42185080_42185173_42187397_42187573_42187905_42188017_42191371_42191415_42193113_42193212_42207493
transcript_136154.nnic	chr8	+	379	2	Antisense	novelGene_ENSG00000104368.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAGTGCTGAGTTTGAA	NA	False	NA	NA	False	AATATA	-16	NA	42207342	42208772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_42207475_42208525
transcript_136157.known	chr8	-	955	3	FSM	ENSG00000253408.6	ENST00000518994.2	955	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTATATGATTTTTTTT	NA	False	NA	NA	False	ATTAAA	-26	NA	42271266	42255319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42255515_42263328_42263473_42270650
transcript_136158.known	chr8	+	3938	22	FSM	ENSG00000104365.16	ENST00000520810.6	3938	22	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_5	21.2645575052878	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACAGTGGGAAATAACACC	NA	False	NA	16	True	AATAAA	-26	NA	42271301	42332460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42271470_42272082_42272206_42288633_42288729_42290155_42290274_42293442_42293513_42305186_42305276_42306342_42306433_42308900_42309026_42314321_42314430_42316209_42316340_42316709_42316905_42317656_42317772_42318551_42318676_42319269_42319422_42319584_42319647_42320734_42320845_42321895_42321946_42322053_42322154_42322346_42322495_42325969_42326098_42329123_42329215_42330913
transcript_136168.nnic	chr8	+	520	4	NNC	ENSG00000104365.16	novel	3938	22	NA	NA	0	-15846	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	41.3467720088952	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGACTTTTCTTTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	42271301	42289390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_42271470_42272082_42272206_42288633_42288729_42289256
transcript_136169.known	chr8	+	373	3	FSM	ENSG00000104365.16	ENST00000523018.5	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	10.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTTGTTTGTTTGCTTGT	42322427	False	NA	31	True	AATAGA	-42	NA	42322440	42329314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42322495_42325969_42326098_42329123
transcript_13617.known	chr1	-	1820	6	FSM	ENSG00000159176.14	ENST00000340006.7	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	7.88416133777081	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGTGTCCAATCCTGTG	-201505842	True	NA	-1	True	AATAAA	-17	NA	201507123	201483529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_201484790_201485282_201485377_201488854_201488985_201490175_201490345_201496191_201496305_201507069
transcript_136170.nic	chr8	+	1436	15	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	43.9396617823922	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338452	42371808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42354416_42354522_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_136172.known	chr8	+	1341	15	FSM	ENSG00000070501.12	ENST00000522610.5	1341	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	46.4872705859423	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCTTGCAATGTAGT	42336911	True	NA	-27	True	TTTAAA	-19	NA	42338506	42371765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361095_42361203_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_136176.known	chr8	+	1290	14	FSM	ENSG00000070501.12	ENST00000265421.9	1290	14	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	27.6771325942384	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	42336898	True	NA	16	True	AATAAA	-17	NA	42338493	42371808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42338686_42339011_42339070_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_136190.nic	chr8	+	1272	13	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_1	27.1971965467031	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338453	42371808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42362611_42362699_42369270_42369336_42369848_42369989_42371562
transcript_1362.known	chr1	+	551	3	FSM	ENSG00000158286.13	ENST00000484435.1	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCAATGCTTGCACATGCA	6206078	False	NA	NA	False	NA	NA	NA	6206128	6207564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6206303_6206535_6206727_6207378
transcript_13620.known	chr1	+	11416	24	FSM	ENSG00000198700.10	ENST00000361565.9	11416	24	0	0	0	0	multi-exon	FALSE	canonical	2	592	junction_8	87.5818170009457	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTCGTAGTGCTGCCTC	201814733	True	NA	6	True	AATAAA	-17	NA	201829156	201884291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201852103_201852193_201853010_201853098_201854594_201854715_201854822_201854924_201855123_201855183_201855782_201855935_201857095_201857195_201858446_201858554_201858854_201858995_201863447_201863608_201866732_201866960_201868647_201868797_201869589_201869719_201870582_201870859_201871160_201871328_201872827_201872962_201874249_201874373_201874831_201874937_201875151_201875229_201875943
transcript_136200.nic	chr8	+	1185	12	NIC	ENSG00000070501.12	novel	1290	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_9	41.4330087596355	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42338453	42371808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_136236.known	chr8	+	725	9	FSM	ENSG00000070501.12	ENST00000520008.5	725	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	30.7113578338699	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGTGCCTCAGAGTTTAT	NA	False	NA	NA	False	NA	NA	NA	42338458	42361361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42338686_42344952_42345020_42349015_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294
transcript_136237.known	chr8	+	863	10	FSM	ENSG00000070501.12	ENST00000521290.5	863	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	41.1333273305716	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATGATGATGATCTTAT	NA	False	NA	16	True	AATAAA	-17	NA	42349038	42371808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42349091_42350006_42350066_42352518_42352569_42355515_42355568_42357168_42357224_42357319_42357393_42361294_42361366_42369270_42369336_42369848_42369989_42371562
transcript_136238.known	chr8	-	896	4	FSM	ENSG00000104371.5	ENST00000220812.3	896	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAATCTTGGACATTAAC	NA	False	NA	NA	False	AATAAA	-23	NA	42377229	42374062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42374360_42374760_42374914_42375679_42375831_42376934
transcript_136245.known	chr8	+	1418	10	FSM	ENSG00000078668.14	ENST00000022615.9	1418	10	0	0	0	0	multi-exon	FALSE	canonical	3	1118	junction_5	81.955272354295	9134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATTTGTTTTAAGAAGC	42379441	True	NA	62	True	NA	NA	NA	42391879	42405937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42398711_42398865_42399650_42399704_42401787_42402016_42403310_42403462_42404866_42404925_42405370
transcript_136246.known	chr8	+	799	9	FSM	ENSG00000078668.14	ENST00000522572.5	799	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	624.942984899423	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGACCCACCAGTTTGT	42379425	True	NA	42	True	ATTAAA	-42	NA	42391863	42405749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42396677_42396681_42398711_42398865_42399650_42399704_42401787_42401837_42405432
transcript_136247.known	chr8	+	784	8	FSM	ENSG00000078668.14	ENST00000521348.5	784	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	584.825213728209	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCTGGTGCACGTGGTG	42379451	True	NA	NA	False	NA	NA	NA	42391889	42402164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42391929_42393844_42393885_42394209_42394279_42395083_42395134_42396677_42396681_42398711_42398865_42399650_42399704_42401787
transcript_136253.nic	chr8	-	926	2	ISM	ENSG00000168575.10	ENST00000518384.1	557	3	-147	62295	-17	59	5prime_fragment	FALSE	canonical	2	4	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTATAGTTGCATTC	-42540284	True	NA	53	True	ATTAAA	-15	NA	42541728	42534600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_42535336_42541537
transcript_136258.known	chr8	+	2958	4	FSM	ENSG00000176209.12	ENST00000438528.7	2958	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	290.050953378119	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGTGGTATAGAGCCAAGT	42540948	True	NA	NA	False	AATAAA	-36	NA	42541154	42555193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42541200_42546468_42546607_42548655_42548781_42552543
transcript_136262.known	chr8	+	3704	4	FSM	ENSG00000176209.12	ENST00000417410.7	3704	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	256.190467339352	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGGTATAGAGCCAAGTAA	42535542	True	NA	NA	False	AATAAA	-38	NA	42541584	42555195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42542374_42546468_42546607_42548655_42548781_42552543
transcript_136263.known	chr8	+	691	4	FSM	ENSG00000176209.12	ENST00000416469.6	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	268.415515365429	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCTCAGAAAAAGAGCAAC	42541770	False	NA	-76	True	NA	NA	NA	42541792	42552608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42542156_42546468_42546607_42548655_42548781_42552543
transcript_136266.known	chr8	+	793	4	FSM	ENSG00000176209.12	ENST00000414154.6	793	4	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	117.941605136704	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTTCATTGTATTC	42535570	True	NA	14	True	AATAAA	-27	NA	42541612	42552980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42541706_42546468_42546607_42548655_42548781_42552543
transcript_136267.known	chr8	+	487	3	FSM	ENSG00000176209.12	ENST00000490331.2	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_1	23	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATTGTTCTGTGCATTG	42546414	False	NA	10	True	CATAAA	-23	NA	42546427	42552726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42546607_42548655_42548781_42552543
transcript_136268.known	chr8	+	233	2	FSM	ENSG00000176209.12	ENST00000518574.1	233	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATATTCTGTGCTGA	42535555	True	NA	NA	False	NA	NA	NA	42541597	42548780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42541706_42548655
transcript_136270.known	chr8	-	2161	3	FSM	ENSG00000131931.8	ENST00000254250.7	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	14.5	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGTGTCTTTTGTAGA	-42841029	True	NA	-6	True	ATTAAA	-18	NA	42843325	42836673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42838337_42839185_42839382_42843023
transcript_136273.known	chr8	+	1505	2	FSM	ENSG00000286837.1	ENST00000669010.1	1505	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGTACTTTCACCACTTT	42842945	True	NA	NA	False	NA	NA	NA	42842988	42844876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42843384_42843766
transcript_136274.known	chr8	-	1943	2	FSM	ENSG00000131931.8	ENST00000345117.2	1943	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCAAAGTGTCTTTTGTA	-42841009	True	NA	-8	True	ATTAAA	-16	NA	42843305	42836675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42838337_42843023
transcript_136277.known	chr8	+	14348	22	FSM	ENSG00000168172.9	ENST00000307602.9	14348	22	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_16	12.5418121559125	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCCTAGATTTCTTTTT	42894415	True	NA	96	True	AATAAA	-15	NA	42896977	43030535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_42897189_42906172_42906259_42925556_42925630_42930121_42930173_42943312_42943446_42950387_42950456_42957093_42957157_42959230_42959315_42964310_42964475_42966472_42966614_42968012_42968215_42973288_42973400_42974106_42974195_42982626_42982697_42986654_42986796_42997549_42997638_43002106_43002142_43007846_43007930_43010304_43010406_43013050_43013156_43013328_43013401_43018357
transcript_136285.known	chr8	-	4116	7	FSM	ENSG00000120925.16	ENST00000534961.5	4116	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	24.2950612265127	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGTTATTTTTCTGTT	-42896460	False	NA	0	True	AATAAA	-23	NA	42896723	42853296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_136286.known	chr8	-	3764	7	FSM	ENSG00000120925.16	ENST00000527424.6	3764	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	9.16515138991168	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTGTTATTTTTC	-42896118	True	NA	-4	True	AATAAA	-19	NA	42896605	42853300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_136287.nic	chr8	-	1774	7	NIC	ENSG00000120925.16	novel	4116	7	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	21.0713075057055	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42897318	42855247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_136289.known	chr8	-	1338	7	FSM	ENSG00000120925.16	ENST00000526349.5	1338	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	30.4795013082563	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	-42896443	False	NA	-5	True	AATAAA	-15	NA	42896706	42855706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887848_42887872_42896483
transcript_136292.nic	chr8	-	1315	7	NIC	ENSG00000120925.16	novel	4116	7	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_6	21.0713075057055	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGAAAATTCAGTATTTC	NA	False	NA	-5	True	AATAAA	-15	NA	42897318	42855706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_42856429_42861744_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_136300.known	chr8	-	2023	6	FSM	ENSG00000120925.16	ENST00000240159.8	2023	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	30.6555052152138	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42896168	True	NA	NA	False	NA	NA	NA	42896655	42855247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896253
transcript_136301.known	chr8	-	1265	6	FSM	ENSG00000120925.16	ENST00000319073.5	1265	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	22.8508205541945	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGGGGAAAATTCAGTATT	-42896101	True	NA	-7	True	AATAAA	-13	NA	42896588	42855708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42856429_42861744_42861856_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_136309.known	chr8	-	1169	6	FSM	ENSG00000120925.16	ENST00000528318.5	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	9.01997782702374	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	-42896460	False	NA	NA	False	AAAAAG	-11	NA	42896723	42861329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42896483
transcript_136310.nic	chr8	-	1008	6	NIC	ENSG00000120925.16	novel	1169	6	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	21.8814990345726	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCATTATATGTGTTGGG	NA	False	NA	NA	False	AAAAAG	-11	NA	42897318	42861329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_42861856_42865415_42865490_42870003_42870113_42873930_42874007_42887727_42887872_42897239
transcript_13632.nic	chr1	+	940	5	NIC	ENSG00000198700.10	novel	704	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	366.863394194624	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGACTTTATCCTTGAG	201814729	True	NA	NA	False	AATAAA	-22	NA	201829152	201850816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_201829373_201847278_201847341_201847551_201847639_201848392_201848595_201850447
transcript_136320.nnic	chr8	+	1556	9	NNC	ENSG00000168522.13	novel	874	7	NA	NA	-164	0	intron_retention	FALSE	canonical	1	3	junction_1	183.980934813909	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43056129	True	NA	24	True	AATAAA	-21	NA	43056143	43085785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_43056257_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_136321.known	chr8	+	1667	9	FSM	ENSG00000168522.13	ENST00000302279.8	1667	9	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_5	45.6124982872019	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43053572	True	NA	24	True	AATAAA	-21	NA	43056322	43085785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_136327.known	chr8	+	982	8	FSM	ENSG00000168522.13	ENST00000533383.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	189.740961979909	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGAAAGGAATATTGGAGA	43053579	True	NA	NA	False	AAGAAA	-10	NA	43056329	43085193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43064100_43064216_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_136329.nic	chr8	+	1390	7	NIC	ENSG00000168522.13	novel	1667	9	NA	NA	-16	0	intron_retention	FALSE	canonical	3	41	junction_1	188.215671209623	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGCCATAGAAGTTTGAT	43053648	True	NA	24	True	AATAAA	-21	NA	43056398	43085785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_43056547_43069554_43069660_43072180_43072308_43077215_43077365_43083117_43083181_43084709_43084882_43085159
transcript_136337.known	chr8	+	750	5	FSM	ENSG00000168522.13	ENST00000524546.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	245.456080592843	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTGTAGCCTGTTGATTA	43053604	True	NA	NA	False	AATAAA	-35	NA	43056354	43070353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43056547_43059091_43059178_43064100_43064216_43069554_43069660_43070101
transcript_136340.known	chr8	+	2342	4	FSM	ENSG00000185900.11	ENST00000674727.1	2342	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAATAAACATCGGGATGC	43086921	True	NA	NA	False	NA	NA	NA	43093514	43105632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43093564_43097523_43097616_43102504_43102601_43103527
transcript_136342.known	chr8	+	9535	4	FSM	ENSG00000185900.11	ENST00000676193.1	9535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.5108266385218	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGTGTAGACATATGT	43086904	True	NA	15	True	AATAAA	-25	NA	43093497	43131180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_43093564_43097523_43097616_43103527_43103831_43122106
transcript_136343.known	chr8	+	654	1	FSM	ENSG00000188873.4	ENST00000479243.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	402	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCACAATTTGAATAAATTC	NA	False	NA	NA	False	NA	NA	NA	47157117	47157771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47157100_47157800
transcript_136345.known	chr8	+	3625	20	FSM	ENSG00000164808.17	ENST00000297423.9	3625	20	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	12.1452429044361	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGCGGCTTTTTAATTAA	47256493	True	NA	NA	False	NA	NA	NA	47260937	47736306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375_47396627_47407860_47407962_47440322_47440543_47595810_47596007_47598945_47599197_47673800_47673942_47700402_47700491_47701720_47701865_47701955_47702016_47712661_47712873_47713488_47713642_47727199_47727294_47728932_47729048_47729411_47729466_47735306
transcript_13635.known	chr1	+	914	5	FSM	ENSG00000198892.7	ENST00000464117.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	42.0319818709516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAAGATCCCAGCCAG	201888604	False	NA	NA	False	NA	NA	NA	201888679	201892137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201888782_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_136356.nic	chr8	+	1728	6	ISM	ENSG00000164808.17	ENST00000524141.5	2761	15	-54	315921	-12	9036	5prime_fragment	FALSE	canonical	3	127	junction_5	11.3066352200821	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGAGAACCTGTAGGAAG	47256456	True	NA	NA	False	AAAAAG	-4	NA	47260900	47397520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_47260992_47279861_47280018_47284027_47284095_47291032_47291138_47293866_47294031_47396375
transcript_136358.known	chr8	-	13459	86	FSM	ENSG00000253729.8	ENST00000314191.7	13459	86	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_70	209.979113807288	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGTGTATCTCTTTTAT	-47930216	True	NA	-4	True	AATAAA	-15	NA	47960136	47773110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_47774378_47776843_47776984_47777685_47777875_47778458_47778661_47778727_47778800_47779003_47779094_47782161_47782255_47782377_47782599_47783741_47783810_47785112_47785318_47788905_47789050_47789150_47789239_47794289_47794502_47798236_47798398_47799209_47799391_47800792_47800987_47803305_47803481_47807136_47807327_47817449_47817562_47819401_47819511_47820718_47820944_47821603_47821793_47823857_47823997_47826655_47826862_47828167_47828348_47830604_47830737_47831813_47831927_47834195_47834397_47836337_47836528_47837211_47837420_47839147_47839247_47840015_47840190_47849153_47849304_47849378_47849504_47852672_47852785_47854082_47854215_47855221_47855374_47857155_47857300_47858515_47858636_47858848_47858987_47859610_47859760_47860898_47860972_47862061_47862128_47862372_47862542_47863398_47863578_47864555_47864764_47877723_47877852_47879490_47879659_47881415_47881521_47881911_47882098_47885943_47886148_47887546_47887706_47888517_47888651_47889013_47889223_47890256_47890481_47893138_47893388_47897160_47897295_47898469_47898570_47900372_47900468_47902568_47902796_47904868_47904977_47912409_47912563_47913900_47914065_47915327_47915419_47918276_47918384_47927193_47927354_47927770_47927891_47929091_47929179_47929852_47930013_47930671_47930788_47933019_47933173_47933964_47934091_47935008_47935059_47935731_47935901_47936352_47936518_47939550_47939698_47943208_47943367_47943852_47943884_47943973_47944030_47953619_47953720_47953806_47953920_47954337_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_136359.nic	chr8	-	561	5	ISM	ENSG00000253729.8	ENST00000338368.7	12784	85	-13	180615	-13	0	5prime_fragment	FALSE	canonical	3	216	junction_2	17.0934929139717	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGATACAGGTGAGATG	-47930271	True	NA	NA	False	AGTAAA	-32	NA	47960191	47954349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_47954447_47955873_47955949_47957170_47957264_47957354_47957432_47959972
transcript_13636.known	chr1	+	1432	5	FSM	ENSG00000198892.7	ENST00000362011.7	1432	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	7.21110255092798	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGCACTGCTAACTGTAC	201887876	True	NA	NA	False	NA	NA	NA	201888897	201892587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201889068_201889444_201889617_201890453_201890588_201891400_201891569_201891799
transcript_136362.nnic	chr8	+	3347	18	NNC	ENSG00000104738.18	novel	4062	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	378.224215371551	74	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932113	True	NA	8	True	AATAAA	-21	NA	47960897	47978160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685_47976979_47977736
transcript_136363.nnic	chr8	+	3109	18	NNC	ENSG00000104738.18	novel	3157	18	NA	NA	0	-238	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_17	378.224215371551	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATACTTGGTTACCTG	47932113	True	NA	5	True	AATAAA	-10	NA	47960897	47977922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685_47976979_47977736
transcript_136365.known	chr8	+	4062	17	FSM	ENSG00000104738.18	ENST00000649973.1	4062	17	0	0	0	0	multi-exon	FALSE	canonical	3	1210	junction_1	130.354549570585	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932156	True	NA	8	True	AATAAA	-21	NA	47960940	47978160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47963041_47964573_47964713_47966186_47966408_47967364_47967486_47969797_47970058_47970510_47970877_47971340_47971469_47972856_47973065_47974733_47974963_47975714_47975849_47976685
transcript_136370.nnic	chr8	+	933	8	NNC	ENSG00000104738.18	novel	2598	15	NA	NA	0	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	531.163605219902	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTTACCTGGCATTA	47932113	True	NA	11	True	AATAAA	-16	NA	47960897	47977928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47962958_47977736
transcript_136371.nnic	chr8	+	1165	8	NNC	ENSG00000104738.18	novel	4062	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	531.163605219902	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932113	True	NA	8	True	AATAAA	-21	NA	47960897	47978160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47962958_47977736
transcript_136372.nnic	chr8	+	957	8	NNC	ENSG00000104738.18	novel	2598	15	NA	NA	0	-232	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	531.163605219902	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGTTACCTGGCATTA	47932113	True	NA	11	True	AATAAA	-16	NA	47960897	47977928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47962982_47977736
transcript_136373.nnic	chr8	+	1189	8	NNC	ENSG00000104738.18	novel	4062	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	531.163605219902	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932113	True	NA	8	True	AATAAA	-21	NA	47960897	47978160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47962944_47962982_47977736
transcript_136376.nnic	chr8	+	1152	7	NIC	ENSG00000104738.18	novel	4062	17	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_6	565.813696271917	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATGAGTTGGGCCTTTT	47932113	True	NA	8	True	AATAAA	-21	NA	47960897	47978160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_47961015_47961130_47961215_47961515_47961681_47962052_47962217_47962304_47962407_47962763_47962860_47977736
transcript_136384.known	chr8	+	1322	5	FSM	ENSG00000169139.12	ENST00000521346.5	1322	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2028.80291058545	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCAACAAAAAGGAAATAGG	47985068	True	NA	-64	True	NA	NA	NA	48008418	48061480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008471_48034865_48035062_48043032_48043182_48049852_48049979_48060681
transcript_136386.known	chr8	+	918	3	FSM	ENSG00000169139.12	ENST00000523432.5	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	2086	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATGGTAAATATTTGTT	47985064	True	NA	48	True	NA	NA	NA	48008414	48061417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008471_48049852_48049979_48060681
transcript_136387.known	chr8	+	4342	4	FSM	ENSG00000169139.12	ENST00000523111.7	4342	4	0	0	0	0	multi-exon	FALSE	canonical	3	3322	junction_1	381.393060590602	4240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGAGTTACATGATTGA	47985080	True	NA	28	True	AATAAA	-19	NA	48008430	48064708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48008471_48043032_48043182_48049852_48049979_48060681
transcript_136388.known	chr8	+	625	4	FSM	ENSG00000169139.12	ENST00000520595.2	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1985.55600945092	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAATACACATTAAGTAAA	48042981	True	NA	-9	True	ATTAAA	-11	NA	48043032	48060903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_48043182_48043498_48043627_48049852_48049979_48060681
transcript_136389.known	chr8	-	648	5	FSM	ENSG00000034239.11	ENST00000523092.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCTTATTTTTTCTACT	NA	False	NA	NA	False	AGTAAA	-17	NA	48735268	48724690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_48724802_48729041_48729147_48729719_48729872_48730539_48730645_48735093
transcript_13639.nic	chr1	+	1285	4	ISM	ENSG00000198892.7	ENST00000362011.7	1432	5	243	281	207	169	3prime_fragment	FALSE	canonical	3	91	junction_3	8.2192186706253	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGTCGCATCATTGGAC	201889130	False	NA	29	True	ATTAAA	-20	NA	201889140	201892306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_201889617_201890453_201890588_201891400_201891569_201891799
transcript_136394.known	chr8	+	417	3	FSM	ENSG00000147481.17	ENST00000521574.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCGGAGGGGAGAAGG	49909759	True	NA	NA	False	AAAAAG	-20	NA	49909803	49911583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_49909905_49910891_49911045_49911420
transcript_136395.nnic	chr8	+	553	3	NNC	ENSG00000147481.17	novel	417	3	NA	NA	-214	-20	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAGAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	49909574	49911563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_49909905_49910891_49911045_49911493
transcript_136398.nic	chr8	+	984	2	ISM	ENSG00000147481.17	ENST00000521574.1	417	3	420	0	420	0	3prime_fragment	FALSE	canonical	3	10	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACCGGAGGGGAGAAGG	49910179	False	NA	NA	False	AAAAAG	-20	NA	49910223	49911583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_49911045_49911420
transcript_136399.nnic	chr8	+	784	2	NNC	ENSG00000147481.17	novel	567	2	NA	NA	527	-20	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAGAAAAAAGAAAAAAAA	49910286	False	NA	NA	False	NA	NA	NA	49910330	49911563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_49911045_49911493
transcript_13640.nnic	chr1	+	760	2	NNC	ENSG00000223774.5	novel	494	3	NA	NA	1210	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGATGCAGTCTGAGTT	201895041	False	NA	2	True	AGTAAA	-17	NA	201895051	201899978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_201895563_201899729
transcript_136404.known	chr8	-	1204	6	FSM	ENSG00000168300.14	ENST00000519559.1	1204	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	50.2179250865664	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAATGTTGTTTTAGCT	-51895433	False	NA	7	True	AATAAA	-39	NA	51898970	51820146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51839446_51839639_51845660_51845764_51898929
transcript_136405.known	chr8	-	4044	6	FSM	ENSG00000168300.14	ENST00000522514.6	4044	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	16.4389780704276	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTTTCTCCCATGGCCT	-51895499	True	NA	-13	True	AATAAA	-18	NA	51899036	51817582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51860844_51861247_51898929
transcript_136417.nic	chr8	-	780	5	NIC	ENSG00000168300.14	novel	4044	6	NA	NA	7	-441	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	41.8509259156832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGTTAAACAGAGAATTAA	NA	False	NA	NA	False	AAGAAA	-2	NA	51899179	51820587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_51820719_51831443_51831568_51833517_51833690_51845660_51845764_51898929
transcript_136419.nnic	chr8	-	1791	4	NNC	ENSG00000168300.14	novel	856	2	NA	NA	20	1960	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	52.0597946809457	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTTCCAGTTTTTTTTA	-51895629	True	NA	NA	False	AATAAA	-15	NA	51899166	51842848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_51843898_51845660_51845764_51860844_51861247_51898929
transcript_136422.known	chr8	-	1712	3	FSM	ENSG00000168300.14	ENST00000521344.1	1712	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTTTTATTAATGCA	-51895576	True	NA	NA	False	AATAAA	-29	NA	51899113	51848944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51850087_51860860_51861247_51898929
transcript_136423.nnic	chr8	-	1329	3	NNC	ENSG00000168300.14	novel	1712	3	NA	NA	20	-580	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	61.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTATGTTCTCTTTAA	-51895629	True	NA	-1	True	AATAAA	-17	NA	51899166	51849524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_51850215_51860844_51861247_51898929
transcript_136424.known	chr8	-	856	2	FSM	ENSG00000168300.14	ENST00000521046.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTAAGAGAGACAGGAGA	-51895487	True	NA	NA	False	TATAAA	-36	NA	51899024	51860485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_51861247_51898929
transcript_136426.known	chr8	+	423	2	FSM	ENSG00000228801.7	ENST00000521612.1	423	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGGAGTGTGTGGTGCCT	51899699	False	NA	NA	False	AATAAA	-19	NA	51899733	51911729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_51899847_51911419
transcript_136427.known	chr8	+	407	1	FSM	ENSG00000272024.1	ENST00000607201.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAAATGGATCTGGTAAT	NA	False	NA	NA	False	AATAAA	-19	NA	51950283	51950690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_51950300_51950700
transcript_136428.known	chr8	-	1140	5	FSM	ENSG00000196711.9	ENST00000358543.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1.92028643696715	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGCTTTTGAAGTGTG	-52565209	True	NA	NA	False	ATTAAA	-16	NA	52565430	52534036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_52534601_52538430_52538508_52539830_52539912_52542391_52542446_52565066
transcript_136432.nnic	chr8	-	1333	5	NNC	ENSG00000023287.13	novel	1297	8	NA	NA	5042	-428	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	148.611069574241	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGCCTTTTAAAGAA	-52630955	True	NA	0	True	AATAAA	-17	NA	52630992	52622886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_52623860_52624716_52624788_52628031_52628169_52630469_52630529_52630899
transcript_136433.nnic	chr8	-	1324	5	NNC	ENSG00000023287.13	novel	6614	24	NA	NA	5042	-428	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	143.161403667329	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGCCTTTTAAAGAA	-52630955	True	NA	0	True	AATAAA	-17	NA	52630992	52622886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_52623860_52624716_52624788_52628040_52628169_52630469_52630529_52630899
transcript_136441.nnic	chr8	-	1250	4	NNC	ENSG00000023287.13	novel	6614	24	NA	NA	6389	-428	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	148.344943365867	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTGCCTTTTAAAGAA	-52629608	False	NA	0	True	AATAAA	-17	NA	52629645	52622886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_52623860_52624716_52624788_52628040_52628169_52629567
transcript_136443.nnic	chr8	+	808	2	FSM	ENSG00000288818.1	ENST00000685233.1	741	2	-65	-2	-65	2	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTGACTTTTTTCTT	52714352	True	NA	NA	False	TATAAA	-1	NA	52714539	52716277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_52714991_52715920
transcript_136446.nnic	chr8	-	572	3	NNC	ENSG00000253369.3	novel	868	5	NA	NA	6685	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGCAGTAGTTGTATTCGA	-53414444	True	NA	NA	False	NA	NA	NA	53414491	53408392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_53408580_53408698_53408789_53414196
transcript_136450.known	chr8	-	1892	14	FSM	ENSG00000047249.18	ENST00000396774.6	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	71.481615131271	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTCTGTATTTATTGTTC	-53839481	False	NA	-62	True	AAGAAA	-27	NA	53843042	53715730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_136452.known	chr8	-	2120	14	FSM	ENSG00000047249.18	ENST00000359530.7	2120	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_7	45.3247323317716	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGTCTCTATGCAGCTC	-53839684	True	NA	2	True	AATAAA	-27	NA	53843245	53715542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53811163_53811218_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_136459.nic	chr8	-	1882	13	NIC	ENSG00000047249.18	novel	1892	14	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_12	86.0039970001395	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	-53839464	False	NA	-1	True	AATAAA	-30	NA	53843025	53715669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53842870
transcript_136461.known	chr8	-	2365	13	FSM	ENSG00000047249.18	ENST00000355221.7	2365	13	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	64.7179242731272	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGCTCTATCAATCTATG	NA	False	NA	-12	True	AATAAA	-13	NA	53843558	53715556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53795646_53795840_53801798_53801897_53814661_53814767_53817416_53817531_53829443_53829534_53832983_53833087_53841577_53841726_53843033
transcript_13647.known	chr1	+	1650	6	FSM	ENSG00000134375.11	ENST00000367287.5	1650	6	0	0	0	0	multi-exon	FALSE	canonical	3	794	junction_1	100.041991183702	4002	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTGTATAATTCAG	201952190	True	NA	NA	False	CATAAA	-18	NA	201955502	201970664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201955553_201957280_201957381_201957510_201957575_201963615_201963745_201965432_201965544_201969468
transcript_136493.nnic	chr8	-	1248	6	NNC	ENSG00000047249.18	novel	2365	13	NA	NA	-3308	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	121.74629357808	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	-53775262	False	NA	-1	True	AATAAA	-30	NA	53775373	53715669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_53716025_53743576_53743691_53756554_53756657_53769617_53769744_53771988_53772168_53775001
transcript_136496.known	chr8	-	1672	3	FSM	ENSG00000047249.18	ENST00000521335.1	1672	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	20.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGTCTCTACTAAAAATACAA	-53839698	True	NA	NA	False	NA	NA	NA	53843259	53831788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53833087_53841577_53841726_53843033
transcript_136499.known	chr8	-	494	2	FSM	ENSG00000047249.18	ENST00000518072.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTCTCTCTTTACTT	NA	False	NA	-1	True	AATAAA	-30	NA	53743715	53715669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576
transcript_136500.known	chr8	-	527	3	FSM	ENSG00000047249.18	ENST00000523899.5	527	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	151.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCACTCCAAACATGGCC	-53769577	False	111	-14	True	AATAAA	-17	NA	53769688	53715682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53716025_53743576_53743691_53769617
transcript_136501.known	chr8	+	1664	5	FSM	ENSG00000147509.14	ENST00000276500.4	1664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAATAAAGCACAAGAATT	53880860	True	NA	NA	False	AAGAAA	-23	NA	53880893	53959274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_53881085_53939575_53939725_53946664_53946749_53954075_53954311_53958269
transcript_136503.known	chr8	+	1559	4	FSM	ENSG00000147509.14	ENST00000522225.5	1559	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAATCTTTATTTTTCC	53880838	True	NA	NA	False	AATAAA	-14	NA	53880871	53959296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_53881085_53946664_53946749_53954075_53954311_53958269
transcript_136506.known	chr8	+	610	2	FSM	ENSG00000147509.14	ENST00000523064.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTCGATCACTTACTGA	53880867	True	NA	NA	False	AATAAA	-17	NA	53880900	53913922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_53881085_53913496
transcript_136509.known	chr8	-	2718	9	FSM	ENSG00000187735.15	ENST00000396401.7	2718	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	624.994799978368	1823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTTGTCATTTTATTTA	-54001146	True	NA	2	True	AATAAA	-27	NA	54022448	53966551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54022062
transcript_136510.known	chr8	-	2777	10	FSM	ENSG00000187735.15	ENST00000521604.7	2777	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	520.453031526084	2982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCACATTTTGTCATTTTA	-54001146	True	NA	-2	True	AATAAA	-23	NA	54022448	53966555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_53968113_53970391_53970464_53979024_53979172_53984362_53984518_53986968_53987026_53988113_53988260_53993667_53993756_53999944_54000051_54010429_54010493_54022062
transcript_136521.known	chr8	-	2515	9	FSM	ENSG00000120992.18	ENST00000316963.8	2515	9	0	0	0	0	multi-exon	TRUE	canonical	3	1411	junction_6	92.2936041933568	1072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTATTTTAATATTT	-54086198	True	NA	-1	True	AATAAA	-24	NA	54101947	54046366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_136523.nnic	chr8	-	2452	9	NNC	ENSG00000120992.18	novel	2515	9	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	3	128	junction_6	487.435893220842	179	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54086176	True	NA	-2	True	AATAAA	-23	NA	54101925	54046367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065787_54065814_54100907_54100940_54101754
transcript_136536.nic	chr8	-	2426	8	NIC	ENSG00000120992.18	novel	2515	9	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	146	junction_6	509.086496800386	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54086176	True	NA	-2	True	AATAAA	-23	NA	54101925	54046367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54100907_54100940_54101754
transcript_136537.known	chr8	-	1308	8	FSM	ENSG00000120992.18	ENST00000343231.10	1308	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	549.952205715577	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAAGTTTGTTTTTTCTT	-54086079	True	NA	37	True	AAGAAA	-4	NA	54101828	54047406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54065747_54065814_54100907_54100940_54101754
transcript_136543.known	chr8	-	2482	8	FSM	ENSG00000120992.18	ENST00000618914.4	2482	8	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_2	532.612927567708	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54101949	False	NA	-2	True	AATAAA	-23	NA	54102017	54046367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101754
transcript_136572.known	chr8	-	2526	9	FSM	ENSG00000120992.18	ENST00000618741.1	2526	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	493.19048994785	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGAGTATTTTAATATT	-54101486	False	NA	-2	True	AATAAA	-23	NA	54101554	54046367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_54048119_54051011_54051189_54052654_54052757_54055059_54055134_54062253_54062325_54063327_54063376_54065747_54065814_54100907_54100940_54101349
transcript_136574.known	chr8	+	853	5	FSM	ENSG00000137547.9	ENST00000522521.2	853	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	408.624751452968	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTAAAATTAAATGGCAG	54124615	False	NA	-27	True	NA	NA	NA	54136507	54147858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_54136539_54136610_54136666_54137267_54137434_54142662_54142787_54147381
transcript_136581.known	chr8	-	2573	8	FSM	ENSG00000167904.16	ENST00000434581.7	2573	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	23.1384475516842	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-55770811	True	NA	-14	True	AATAAA	-1	NA	55773378	55738757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_136596.known	chr8	-	2401	6	FSM	ENSG00000167904.16	ENST00000334667.6	2401	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.0245852095694	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGTTGCAGTTAATTTT	-55770840	False	NA	-14	True	AATAAA	-1	NA	55773407	55738757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55740219_55750963_55751158_55756243_55756412_55762634_55763029_55763935_55763981_55773268
transcript_13661.known	chr1	+	3104	9	FSM	ENSG00000163435.16	ENST00000367284.10	3104	9	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_3	4.51213641194501	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGCTTGTGTGTGGATT	202010310	True	NA	NA	False	GATAAA	-19	NA	202010586	202017183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202010707_202011128_202011300_202011956_202012179_202012343_202012437_202012639_202012760_202012946_202013037_202013181_202013299_202013828_202014025_202015208
transcript_136622.known	chr8	-	826	3	FSM	ENSG00000167904.16	ENST00000522576.5	826	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	78.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTTGAAATAAGAAAATTT	-55770811	True	NA	-87	True	ATTAAA	-29	NA	55773378	55762399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55763029_55763935_55763981_55773226
transcript_136623.known	chr8	-	2400	3	FSM	ENSG00000167904.16	ENST00000521229.5	2400	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	24.5	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTCCATTTGAGTAGC	-55770800	True	NA	NA	False	ATTAAA	-18	NA	55773367	55760772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55763029_55763935_55763981_55773268
transcript_13663.known	chr1	+	2093	10	FSM	ENSG00000176393.11	ENST00000471105.5	2093	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	225.36094505383	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGGATTGAGTGACTATTAAA	201982925	False	NA	16	True	AATAAA	-24	NA	201982954	202006147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_201983114_201988903_201989045_201996146_201996410_201997318_201997555_201999901_202000016_202001375_202001489_202001658_202001768_202003236_202003462_202004353_202004497_202005557
transcript_136632.known	chr8	-	2477	7	FSM	ENSG00000167904.16	ENST00000617782.4	2477	7	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_3	24.704925284917	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTCTTGAGAAATTACA	-55761413	False	88	0	True	AATAAA	-15	NA	55763980	55738743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_55740219_55743480_55743621_55745060_55745122_55750963_55751158_55756243_55756412_55762634_55763029_55763935
transcript_136633.known	chr8	+	4477	13	FSM	ENSG00000137574.11	ENST00000260129.6	4477	13	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	18.3626659284539	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGAAGTGTTCTAGTCT	55768491	True	NA	NA	False	GATAAA	-38	NA	55773445	55826445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55810880_55811098_55813039_55813119_55824580
transcript_136637.nic	chr8	+	573	4	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-16	40163	-16	-12716	5prime_fragment	FALSE	canonical	3	170	junction_1	6.23609564462324	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCAAAAGAAATACTTAGA	55768475	True	NA	NA	False	AATAAA	-22	NA	55773429	55786282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_55773720_55782747_55782813_55785718_55785892_55786237
transcript_136639.nic	chr8	+	531	3	ISM	ENSG00000137574.11	ENST00000260129.6	4477	13	-16	40551	-16	-13104	5prime_fragment	FALSE	canonical	3	170	junction_1	7.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTAATTTACTTTTATT	55768475	True	NA	NA	False	NA	NA	NA	55773429	55785894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_55773720_55782747_55782813_55785718
transcript_136643.known	chr8	+	3159	11	FSM	ENSG00000137574.11	ENST00000523948.5	3159	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	78.2173893709065	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATATGTGTTGCTTAATT	55768515	True	NA	17	True	ATTAAA	-19	NA	55773469	55825448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_55773720_55785718_55785892_55786237_55787061_55790181_55790300_55792697_55792785_55795977_55796153_55798913_55799221_55802456_55802607_55804892_55805037_55813054_55813119_55824580
transcript_136644.known	chr8	+	5872	13	FSM	ENSG00000254087.8	ENST00000519728.6	5872	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	18.8569173868194	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTAGAATCTCCCTGA	55875457	True	NA	NA	False	AATAAA	-15	NA	55879834	56014169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_55880104_55941854_55941992_55946447_55946494_55947617_55947724_55950458_55950558_55950680_55950785_55951965_55952116_55953831_55953985_55966714_55966898_55969716_55969794_55998345_55998500_55999417_55999550_56009907
transcript_136645.known	chr8	-	1170	1	FSM	ENSG00000236814.1	ENST00000435260.1	1170	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACTGTAAGATTTTTGAT	NA	False	NA	NA	False	NA	NA	NA	56051207	56050037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56050000_56051200
transcript_13667.known	chr1	-	1789	7	FSM	ENSG00000143862.8	ENST00000272217.7	1789	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	60.2035897785358	200	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGTGTATGGTGCTGGTT	-202138779	True	NA	-3	True	AATAAA	-20	NA	202144737	202133403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202134517_202135149_202135221_202135458_202135527_202135706_202135801_202137964_202138039_202138367_202138449_202144449
transcript_136671.known	chr8	-	650	4	FSM	ENSG00000008988.11	ENST00000521262.5	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	4338.02545968657	4154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869825	True	NA	-5	True	AATAAA	-19	NA	56074510	56073053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074253
transcript_136680.known	chr8	-	423	3	FSM	ENSG00000008988.11	ENST00000520627.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4780	3543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869825	True	NA	-5	True	AATAAA	-19	NA	56074510	56073053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074380
transcript_136682.known	chr8	-	899	3	FSM	ENSG00000008988.11	ENST00000523936.5	899	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_2	4508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGATGACCAGTTGTTAAC	-55869671	False	NA	-24	True	NA	NA	NA	56074356	56073072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073769_56074059_56074160_56074253
transcript_136683.known	chr8	-	519	4	FSM	ENSG00000008988.11	ENST00000009589.8	519	4	0	0	0	0	multi-exon	FALSE	canonical	3	9148	junction_3	183.571965906199	265401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTTGGTTTTTATTCA	-55869821	True	NA	-5	True	AATAAA	-19	NA	56074506	56073053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059_56074160_56074380
transcript_136684.known	chr8	-	752	3	FSM	ENSG00000008988.11	ENST00000524349.5	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	9198	junction_2	181	3545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTCAGAATACTGGCAG	-55869821	True	NA	7	True	AATAAA	-31	NA	56074506	56073041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56073694_56073769_56074059
transcript_136685.known	chr8	-	424	3	FSM	ENSG00000008988.11	ENST00000519606.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_1	4512	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGATGACCAGTTGTTA	-55869821	True	NA	-26	True	NA	NA	NA	56074506	56073074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56073273_56074059_56074160_56074380
transcript_136690.known	chr8	-	7311	5	FSM	ENSG00000181690.8	ENST00000316981.8	7311	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	6.12372435695795	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAATGTAGATCTTCCTGA	-56209714	True	NA	-3	True	AATAAA	-18	NA	56211273	56160908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56179408_56179514_56211120
transcript_136692.known	chr8	-	1899	4	FSM	ENSG00000181690.8	ENST00000429357.2	1899	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.39266853573691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTGGGACATGGATTCA	-56209741	True	NA	NA	False	NA	NA	NA	56211300	56166242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56167504_56168027_56168387_56171090_56171190_56211120
transcript_136693.known	chr8	-	1684	3	FSM	ENSG00000181690.8	ENST00000423799.6	1684	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTAGCTTTTAAACTGAGC	-56209741	True	NA	NA	False	TATAAA	-6	NA	56211300	56166098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56167504_56171090_56171190_56211120
transcript_136694.known	chr8	-	435	2	FSM	ENSG00000181690.8	ENST00000519027.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAAGGAATTGTGGAAA	-56209765	True	NA	NA	False	NA	NA	NA	56211324	56209252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56209484_56211120
transcript_136702.known	chr8	+	1697	4	FSM	ENSG00000170791.18	ENST00000355315.8	1697	4	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	150.019998666844	2799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACTCTTGTTGAGTCTT	56200999	True	NA	NA	False	NA	NA	NA	56211788	56218809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56214597_56214668_56216432_56216532_56217330
transcript_136703.known	chr8	+	573	4	FSM	ENSG00000170791.18	ENST00000521831.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	236.322284650056	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGTTCTTCAAGTGGAGA	56200896	True	NA	51	True	NA	NA	NA	56211685	56217538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56214597_56214668_56216388_56216532_56217330
transcript_136704.known	chr8	+	1670	5	FSM	ENSG00000170791.18	ENST00000518801.5	1670	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.10078941735	654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGATTTGTATTGAC	56201008	True	NA	17	True	AATAAA	-20	NA	56211797	56218619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216388_56216532_56217330
transcript_136705.known	chr8	+	552	6	FSM	ENSG00000170791.18	ENST00000521982.5	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	227.025461127161	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATTAAAAGTGTTTATATA	56200999	True	NA	-15	True	NA	NA	NA	56211788	56217441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216432_56216532_56216679_56216755_56217330
transcript_136706.known	chr8	+	1805	5	FSM	ENSG00000170791.18	ENST00000523975.5	1805	5	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	239.675170804153	662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTGTCCTGATGCCACTCT	56201008	True	NA	NA	False	NA	NA	NA	56211797	56218798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212890_56214597_56214668_56216432_56216532_56217330
transcript_136707.known	chr8	+	559	6	FSM	ENSG00000170791.18	ENST00000523667.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	112.097457598288	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGAATGTTTGCATTAAA	56200999	True	NA	-27	True	NA	NA	NA	56211788	56217429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216507_56216679_56216755_56217330
transcript_136708.known	chr8	+	567	6	FSM	ENSG00000170791.18	ENST00000523532.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	106.168545247639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGGAAATATGCCCTAT	56200999	True	NA	-44	True	NA	NA	NA	56211788	56217412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56212761_56212910_56214597_56214668_56216388_56216532_56216679_56216755_56217330
transcript_136709.known	chr8	+	557	4	FSM	ENSG00000170791.18	ENST00000523061.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	261.10576826685	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAGAGTATGATGTGAA	56201018	True	NA	NA	False	NA	NA	NA	56211807	56217713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56211838_56214597_56214668_56216432_56216507_56217330
transcript_136710.known	chr8	+	3157	3	FSM	ENSG00000170791.18	ENST00000522166.1	3157	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	286	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGCAGATGAATATTTCT	56200999	True	NA	9	True	ATTAAA	-17	NA	56211788	56217465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56214668_56216388_56216532_56217330
transcript_136711.known	chr8	-	2536	7	FSM	ENSG00000170786.13	ENST00000303749.8	2536	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.21335164821342	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTATTCCACTGTAGAT	-56320140	True	NA	NA	False	AATAAA	-21	NA	56320175	56300004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56301574_56305596_56305723_56306675_56306821_56308927_56309028_56312156_56312289_56316014_56316362_56320058
transcript_136713.known	chr8	-	1251	4	FSM	ENSG00000181195.11	ENST00000451791.7	1251	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.85861230093008	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATCCTTGTAAGTCTCT	-56446567	True	NA	NA	False	AATAAA	-19	NA	56446641	56440956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56441938_56445815_56445957_56446425_56446482_56446568
transcript_136714.known	chr8	-	1199	2	FSM	ENSG00000181195.11	ENST00000314922.3	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTTGTAAGTCTCTTTT	-56445956	False	NA	NA	False	AATAAA	-22	NA	56446030	56440953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_56441938_56445815
transcript_136715.known	chr8	+	403	1	FSM	ENSG00000241431.1	ENST00000464216.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14700	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCCCTACAGGCCAATTTT	NA	False	NA	NA	False	AATAAA	-34	NA	56588384	56588787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56588400_56588800
transcript_136716.known	chr8	+	294	1	FSM	ENSG00000241431.1	ENST00000460682.1	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAACGATTAGTCATGCA	NA	False	NA	NA	False	NA	NA	NA	56588406	56588700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_56588400_56588700
transcript_136717.known	chr8	+	2109	3	FSM	ENSG00000205293.5	ENST00000522992.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGGTGTCTGAGGGATTCT	NA	False	NA	NA	False	AATAAA	-18	NA	57978357	57984126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_57978485_57980893_57981015_57982265
transcript_136725.known	chr8	+	717	7	FSM	ENSG00000215114.10	ENST00000522978.1	717	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	91.1604202613295	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTTAGTTTGAAGT	58407224	True	NA	NA	False	NA	NA	NA	58411358	58434941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58411470_58413298_58413372_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_136727.known	chr8	+	4971	8	FSM	ENSG00000215114.10	ENST00000399598.7	4971	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_5	29.2372421156752	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAAAGGTTTTTCAAATT	58407226	True	NA	13	True	AATAAA	-22	NA	58411360	58451501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58439632_58439771_58445906_58446069_58447388
transcript_136728.known	chr8	+	1225	9	FSM	ENSG00000215114.10	ENST00000523409.5	1225	9	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_6	80.4129964620148	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTCCAATCTGAATATA	58407246	True	NA	28	True	GATAAA	-21	NA	58411380	58447684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58411470_58416849_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857_58434949_58439632_58439771_58445906_58446069_58447388
transcript_136729.known	chr8	+	618	5	FSM	ENSG00000215114.10	ENST00000521796.1	618	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	79.7915252392132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAAGTGGAGTTATTTC	58416919	False	NA	NA	False	AATAAA	-27	NA	58416929	58435106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58416954_58430518_58430670_58433159_58433244_58434394_58434505_58434857
transcript_136736.known	chr8	+	2073	9	FSM	ENSG00000137575.12	ENST00000260130.9	2073	9	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_4	92.6437228040842	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	58543483	True	NA	26	True	AATAAA	-19	NA	58553260	58582858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58553304_58565018_58565085_58570886_58570966_58572204_58572315_58575899_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_136737.known	chr8	+	3589	10	FSM	ENSG00000137575.12	ENST00000523483.5	3589	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	394.164595562643	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACTGCATCATTTGCTT	58543476	True	NA	26	True	AATAAA	-19	NA	58553253	58582858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_58553304_58560283_58561796_58565018_58565085_58570886_58570966_58572204_58572315_58575902_58576062_58578032_58578209_58579622_58579795_58580516_58580609_58581685
transcript_136738.known	chr8	-	3574	31	FSM	ENSG00000035681.9	ENST00000038176.8	3574	31	0	0	0	0	multi-exon	TRUE	canonical	3	76	junction_24	18.7980199902957	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCTGTTTTCACTTTAT	-58659804	False	NA	NA	False	ATTAAA	-17	NA	58659853	58583507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_58584201_58585651_58585762_58585897_58586001_58586457_58586609_58587617_58587702_58589451_58589576_58590006_58590075_58590866_58590935_58594231_58594291_58595559_58595660_58597386_58597551_58597859_58597903_58599231_58599364_58599749_58599871_58599969_58600022_58601284_58601349_58601444_58601536_58602057_58602138_58603209_58603387_58605926_58606036_58607768_58607841_58609603_58609734_58623219_58623273_58623376_58623425_58623708_58623781_58631495_58631547_58635188_58635226_58635304_58635373_58635467_58635547_58642983_58643074_58659572
transcript_136740.known	chr8	-	4076	9	FSM	ENSG00000198846.6	ENST00000361421.2	4076	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	5.8309518948453	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTGGTGATCCATCA	-59119081	False	NA	1	True	AATAAA	-44	NA	59119147	58805411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_58807784_58808117_58808270_58815337_58815725_58826821_58826903_58838080_58838312_58851523_58851806_58939301_58939545_58959942_58960009_59118885
transcript_136742.known	chr8	+	3207	2	FSM	ENSG00000167912.7	ENST00000665670.1	3207	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATGCAATAAGTAATATC	59119036	True	NA	NA	False	TTTAAA	-14	NA	59119221	59123478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_59119286_59120335
transcript_136745.known	chr8	+	1106	2	FSM	ENSG00000167912.7	ENST00000517898.1	1106	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTTTAAAAATAAAACTT	59119839	False	NA	-25	True	NA	NA	NA	59119945	59121315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_59120072_59120335
transcript_136748.known	chr8	-	5735	9	FSM	ENSG00000178538.10	ENST00000317995.5	5735	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	9.73315853153538	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTGACTATTCATTTC	-60280774	True	NA	1	True	ATTAAA	-22	NA	60281400	60185411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60189986_60208749_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_136750.known	chr8	-	1825	8	FSM	ENSG00000178538.10	ENST00000524872.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	7.586238884201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGATTATTTATTTACC	-60280759	True	NA	NA	False	AATAAA	-43	NA	60281385	60208070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60208920_60222648_60222762_60224536_60224586_60226872_60226936_60232283_60232380_60265924_60266050_60279688_60279881_60281047
transcript_136761.known	chr8	-	2063	3	FSM	ENSG00000251396.8	ENST00000656656.1	2063	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGGGCTGCGTGCTGTGGCT	-60516622	True	NA	NA	False	AATGAA	-4	NA	60516787	60403492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60405250_60508646_60508763_60516597
transcript_136762.known	chr8	-	568	3	FSM	ENSG00000251396.8	ENST00000532232.1	568	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCATTACAATAAGCTGT	-60516630	True	NA	NA	False	NA	NA	NA	60516795	60468862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_60469117_60508646_60508763_60516597
transcript_136765.known	chr8	+	3735	8	FSM	ENSG00000104388.15	ENST00000262646.12	3735	8	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	99.4769997003717	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGGATGTACTAGGTATTA	60501195	True	NA	20	True	AATAAA	-34	NA	60516986	60623644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_136768.known	chr8	+	680	7	FSM	ENSG00000104388.15	ENST00000529579.5	680	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	394.553228348217	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATTCTTGTATAACTTTG	60516165	True	NA	-35	True	NA	NA	NA	60517180	60620895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60618579_60618649_60620673
transcript_136770.known	chr8	+	1058	7	FSM	ENSG00000104388.15	ENST00000531289.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	371.352333445685	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAATTGATGTGATTATT	60501144	True	NA	58	True	NA	NA	NA	60516935	60620988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60572045_60572114_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_136771.known	chr8	+	594	6	FSM	ENSG00000104388.15	ENST00000429861.5	594	6	0	0	0	0	multi-exon	FALSE	canonical	3	896	junction_5	104.851514056784	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTCACCTTCTGTCAGAC	60517223	False	NA	NA	False	CATAAA	-35	NA	60517235	60592117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60584207_60584291_60584722_60584816_60591857
transcript_136772.known	chr8	+	866	9	FSM	ENSG00000104388.15	ENST00000466595.5	866	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	425.773927689331	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGATTGTATTCATAT	60517211	False	NA	18	True	AATAAA	-28	NA	60517223	60620948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60517254_60558851_60558924_60572045_60572114_60576233_60576298_60584207_60584291_60584722_60584816_60591857_60591970_60618579_60618649_60620673
transcript_136773.known	chr8	+	11606	38	FSM	ENSG00000171316.12	ENST00000423902.7	11606	38	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_15	28.7396311533614	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTTGTAGTATTGGAAA	60675895	True	NA	23	True	AATAAA	-30	NA	60678739	60868028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_60679083_60741258_60743098_60780999_60781431_60794985_60795128_60800387_60800526_60801527_60801594_60808216_60808273_60816386_60816502_60820006_60820091_60821789_60821928_60822023_60822146_60822502_60822747_60823839_60824017_60828662_60828807_60830321_60830578_60836072_60836284_60836816_60837013_60837667_60837836_60838075_60838256_60841643_60841755_60841846_60842053_60844863_60845064_60845249_60845410_60848514_60848605_60849050_60849155_60850492_60850623_60851031_60851105_60851261_60851320_60852018_60852248_60852497_60852707_60852828_60853501_60854362_60854524_60855974_60856203_60856444_60856889_60860903_60861126_60862195_60862337_60862547_60862653_60865015
transcript_136781.known	chr8	-	2874	15	FSM	ENSG00000198363.18	ENST00000519234.5	2874	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	223.564821901472	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTCATTATTTTTGA	-61707240	True	NA	-12	True	AATAAA	-17	NA	61714525	61624536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638361_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61682438_61682484_61684038_61684189_61714268
transcript_136784.known	chr8	-	3730	14	FSM	ENSG00000198363.18	ENST00000356457.9	3730	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	153.053612450094	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	-61707311	True	NA	NA	False	AATAAA	-20	NA	61714596	61623709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_136788.known	chr8	-	2744	13	FSM	ENSG00000198363.18	ENST00000518068.5	2744	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	193.752562707066	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATATTGTCATTATTTTT	-61707283	True	NA	-14	True	AATAAA	-15	NA	61714568	61624538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_136789.known	chr8	-	3717	13	FSM	ENSG00000198363.18	ENST00000445642.6	3717	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	195.870847470697	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAATATACTAATTTCTT	-61707355	True	NA	NA	False	AATAAA	-20	NA	61714640	61623709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61626281_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_13679.known	chr1	-	1065	6	FSM	ENSG00000077152.11	ENST00000487227.6	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_5	128.543533481852	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-202327505	True	NA	-16	True	AATAAA	-18	NA	202341980	202331656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202331961_202333009_202333336_202333449_202333556_202334988_202335059_202335645_202335819_202341894
transcript_136795.known	chr8	-	6337	4	FSM	ENSG00000198363.18	ENST00000517856.5	6337	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	256.549323825957	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATGACTGAATTGAGCTT	-61707302	True	NA	-10	True	AATAAA	-20	NA	61714587	61656127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61661927_61680967_61681037_61684038_61684189_61714268
transcript_136796.nnic	chr8	-	552	4	NNC	ENSG00000198363.18	novel	6337	4	NA	NA	-23	141	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	258.591483919242	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGTAAACAAGTGTCATTT	NA	False	NA	NA	False	AATAAA	-35	NA	61714663	61661672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_61661927_61680967_61681037_61684038_61684189_61714584
transcript_136799.known	chr8	-	5301	25	FSM	ENSG00000198363.18	ENST00000379454.9	5301	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	182.864628133005	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCATTTCTAGTCTTCT	-61707307	True	NA	-7	True	AATAAA	-19	NA	61714592	61500555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_61503510_61517527_61517662_61518031_61518124_61525976_61526113_61548070_61548209_61553030_61553121_61555923_61556023_61562743_61562881_61567167_61567319_61576771_61576859_61583943_61584030_61618977_61619020_61633682_61633728_61637946_61638004_61638321_61638364_61642887_61642921_61643385_61643434_61643944_61644002_61644599_61644633_61646749_61646879_61651049_61651125_61653567_61653661_61680967_61681037_61684038_61684189_61714268
transcript_13680.known	chr1	-	824	7	FSM	ENSG00000077152.11	ENST00000643045.1	824	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	485.39502813001	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGTAGTTTATTTAT	-202327484	True	NA	-14	True	AATATA	-14	NA	202341959	202331737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335059_202335641_202335819_202341894
transcript_136801.known	chr8	-	1371	9	FSM	ENSG00000137563.13	ENST00000518466.6	1371	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	168.327062589472	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTATGTGTGTGCATGTG	-63038493	False	NA	90	True	NA	NA	NA	63038545	63014880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038473
transcript_136805.known	chr8	-	1248	9	FSM	ENSG00000137563.13	ENST00000260118.7	1248	9	0	0	0	0	multi-exon	FALSE	canonical	3	446	junction_1	39.6703210851639	3052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTCTAATTGATTTG	-63033602	True	NA	-15	True	AATAAA	-17	NA	63038806	63015078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63015454_63017492_63017631_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_136806.known	chr8	-	961	8	FSM	ENSG00000137563.13	ENST00000518113.2	961	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	173.195890039373	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAAGAGTTGAGTGGAA	-63033597	True	NA	-5	True	AATAAA	-17	NA	63038801	63023508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63023740_63023906_63023998_63024079_63024187_63026157_63026297_63027180_63027266_63030166_63030218_63035655_63035771_63038659
transcript_136807.known	chr8	-	718	1	FSM	ENSG00000270673.1	ENST00000603538.1	718	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGTCCATGGAAGGAA	-63167983	True	NA	NA	False	AATAAA	-25	NA	63168442	63167724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_63167700_63168400
transcript_136809.known	chr8	+	2370	6	FSM	ENSG00000185728.17	ENST00000621413.4	2370	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	212.739841120557	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGTAATTATGCAT	63152625	True	NA	NA	False	NA	NA	NA	63168660	63209955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_63168902_63169386_63169412_63172652_63172799_63175330_63175417_63186146_63187746_63209682
transcript_13681.known	chr1	-	1499	6	FSM	ENSG00000077152.11	ENST00000646595.1	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_5	138.33669072231	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTGTTTATCCTGAATG	-202327495	True	NA	-16	True	AATAAA	-18	NA	202341970	202331656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202331961_202333009_202333094_202333236_202333336_202333449_202333556_202334988_202335819_202341894
transcript_136811.known	chr8	+	2387	5	FSM	ENSG00000185728.17	ENST00000621957.4	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	180.626686843334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTCGATTTTTAGCT	63152616	True	NA	NA	False	NA	NA	NA	63168651	63210115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_63168902_63169386_63169412_63175336_63175417_63186146_63187746_63209682
transcript_13682.known	chr1	+	1808	10	FSM	ENSG00000077157.22	ENST00000480184.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	4.80740170061865	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTTCCTTTTGGTTTGTT	202347170	True	NA	NA	False	AATAAA	-16	NA	202348719	202438242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202349143_202416786_202416918_202422619_202422739_202425565_202425726_202427039_202427185_202428854_202428930_202430730_202430811_202431479_202431620_202434655_202434769_202437820
transcript_136820.known	chr8	+	3122	4	FSM	ENSG00000185728.17	ENST00000517371.5	3122	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	193.402861061223	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATCAGCTTAAGTCATTT	63152618	True	NA	2	True	AATAAA	-7	NA	63168653	63212445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_63168902_63169386_63169412_63175330_63175417_63209682
transcript_13683.known	chr1	-	254	1	FSM	ENSG00000236439.4	ENST00000422457.2	254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCTGAGTCAAGAT	NA	False	NA	NA	False	NA	NA	NA	202472117	202471863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202471900_202472100
transcript_136852.known	chr8	+	1000	2	FSM	ENSG00000254377.7	ENST00000520799.5	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGTACCAGAGGGGTAA	64373303	False	NA	NA	False	AGTAAA	-21	NA	64373327	64378834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_64373552_64378058
transcript_136855.known	chr8	-	3000	7	FSM	ENSG00000104442.10	ENST00000276569.8	3000	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_4	14.8772757362809	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACTTGTGGTATAAGCAT	-65630638	True	NA	-14	True	AATAAA	-32	NA	65634177	65602457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_65604586_65605262_65605338_65605421_65605539_65613243_65613434_65622262_65622355_65627215_65627434_65633997
transcript_136864.nic	chr8	-	858	3	ISM	ENSG00000104442.10	ENST00000528721.5	887	6	-54	17568	-8	-8605	5prime_fragment	FALSE	canonical	3	186	junction_1	10	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAATTTTAGGTAGAGAA	-65630686	True	NA	NA	False	NA	NA	NA	65634225	65621942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_65622355_65627215_65627434_65633997
transcript_136875.known	chr8	+	2651	8	FSM	ENSG00000066855.16	ENST00000262146.9	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	17.7798326476824	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATAGTGCTTCCATTTTTT	65640536	True	NA	15	True	AATAAA	-29	NA	65644733	65710562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_65644785_65669872_65670019_65682352_65682452_65693643_65693760_65704693_65704930_65707009_65707257_65707842_65708012_65708975
transcript_13688.known	chr1	+	748	2	FSM	ENSG00000228288.8	ENST00000417262.5	748	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	202809860	True	NA	23	True	NA	NA	NA	202810961	202811913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202811371_202811574
transcript_136886.known	chr8	-	6961	13	FSM	ENSG00000205268.11	ENST00000401827.8	6961	13	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_11	33.2615894589139	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATTAATGTGTTCCC	-65838355	True	NA	NA	False	AATAAA	-20	NA	65842064	65714333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_65719496_65723540_65723622_65724254_65724352_65724776_65724922_65726874_65726967_65727169_65727302_65734793_65734895_65739501_65739598_65745406_65745471_65747651_65747804_65779719_65779804_65782782_65782844_65841370
transcript_136887.known	chr8	+	580	1	FSM	ENSG00000272192.1	ENST00000607622.1	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTCTTGTGGATTTTGT	65842699	False	NA	NA	False	ATTAAA	-18	NA	65842751	65843331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_65842800_65843300
transcript_136889.known	chr8	+	2229	14	FSM	ENSG00000147576.17	ENST00000424777.6	2229	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	8.44754086971837	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAAGTATTCATTATTGG	66432374	True	NA	9	True	AATAAA	-14	NA	66432497	66468809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66440161_66440200_66442797_66442845_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66453709_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_13689.known	chr1	+	634	2	FSM	ENSG00000228288.8	ENST00000425295.2	705	2	69	2	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTCTTTTTTCCGCGG	202809860	True	NA	23	True	NA	NA	NA	202810961	202811913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202811371_202811688
transcript_136892.known	chr8	+	1830	13	FSM	ENSG00000147576.17	ENST00000276576.11	1830	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	10.5185022169931	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTAAGTATTCATTATT	66432375	True	NA	7	True	AATAAA	-12	NA	66432498	66468807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66432576_66440161_66440200_66444366_66444421_66444593_66444749_66445217_66445415_66447263_66447342_66448864_66448971_66451952_66452106_66454058_66454158_66456816_66456896_66457069_66457167_66460307_66460466_66468268
transcript_136896.known	chr8	+	1720	1	FSM	ENSG00000179041.4	ENST00000320270.4	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTGACTACTGGGTAGA	66422198	True	NA	33	True	AATAAA	-27	NA	66429013	66430733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66429000_66430700
transcript_136898.nnic	chr8	+	222	2	NIC	ENSG00000288596.2	novel	598	4	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665993	True	NA	3	True	AATAAA	-15	NA	66667556	66678295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66678218
transcript_136900.nic	chr8	+	911	2	ISM	ENSG00000288596.2	ENST00000521113.1	575	3	-54	5074	-54	-510	5prime_fragment	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTATCCTGTCAGAGA	66665997	True	NA	NA	False	AATAAA	-24	NA	66667560	66680490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66679720
transcript_136909.nnic	chr8	+	459	4	NNC	ENSG00000288596.2	novel	598	4	NA	NA	-98	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	14.142135623731	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665953	True	NA	3	True	AATAAA	-15	NA	66667516	66678295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_66667702_66676744_66676903_66677641_66677681_66678218
transcript_136910.known	chr8	+	598	4	FSM	ENSG00000288596.2	ENST00000521889.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	11.3137084989848	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66666088	False	NA	3	True	AATAAA	-15	NA	66667651	66678295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66667702_66676744_66676903_66677641_66677955_66678218
transcript_136914.nic	chr8	+	695	4	NIC	ENSG00000288596.2	novel	732	3	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	4.96655480858378	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATCTAATGTTAATCGTT	66665993	True	NA	14	True	AATAAA	-15	NA	66667556	66685560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66679720_66680025_66680392_66680459_66685380
transcript_136916.nic	chr8	+	942	4	NIC	ENSG00000288596.2	novel	575	3	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	7.40870359029762	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	66665997	True	NA	18	True	AATAAA	-19	NA	66667560	66685564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66677641_66677955_66679720_66680025_66685380
transcript_136923.nic	chr8	+	826	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-135	171	-98	-171	5prime_fragment	FALSE	canonical	3	35	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATCCTCTCATAAATGAC	66665953	True	NA	NA	False	AATAAA	-21	NA	66667516	66678124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_136924.nic	chr8	+	997	3	ISM	ENSG00000288596.2	ENST00000521889.5	598	4	-135	0	-98	0	intron_retention	FALSE	canonical	3	35	junction_1	0	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665953	True	NA	3	True	AATAAA	-15	NA	66667516	66678295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66676744_66676903_66677641
transcript_136926.known	chr8	+	575	3	FSM	ENSG00000288596.2	ENST00000521113.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.5	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGTTAATCGTTTTGA	66666051	True	NA	18	True	AATAAA	-19	NA	66667614	66685564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66667702_66679720_66680025_66685380
transcript_136928.nic	chr8	+	531	3	NIC	ENSG00000288596.2	novel	598	4	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	3.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665997	True	NA	3	True	AATAAA	-15	NA	66667560	66678295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_66667702_66677641_66677955_66678218
transcript_136929.known	chr8	+	1835	3	FSM	ENSG00000288596.2	ENST00000661636.1	1835	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTTTATATTACAAAGAAT	66666054	True	NA	NA	False	AAAAAG	-9	NA	66667617	66681158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66667702_66677641_66677955_66679720
transcript_136933.nic	chr8	+	795	2	ISM	ENSG00000288596.2	ENST00000661636.1	1835	3	-57	2863	-54	0	5prime_fragment	FALSE	canonical	3	18	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTGTTTGTGTTTTT	66665997	True	NA	3	True	AATAAA	-15	NA	66667560	66678295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_66667702_66677641
transcript_136936.known	chr8	+	4190	17	FSM	ENSG00000104205.16	ENST00000396596.2	4190	17	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	8.07363572066513	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAATGTCTGTCATTATT	66774281	True	NA	4	True	AATAAA	-16	NA	66775180	66862020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66843451_66843548_66847192_66847349_66850830_66850921_66859410
transcript_13694.known	chr1	-	1835	3	FSM	ENSG00000214796.9	ENST00000443294.6	1982	3	147	0	12	0	multi-exon	FALSE	canonical	3	60	junction_1	64.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTTCAAGCGATTCTCC	-202858680	True	NA	NA	False	NA	NA	NA	202861608	202851827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202853281_202858881_202859103_202861447
transcript_136942.known	chr8	+	2483	16	FSM	ENSG00000104205.16	ENST00000520976.5	2483	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	14.4950566286119	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAGTA	66774327	True	NA	NA	False	NA	NA	NA	66775226	66860455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66828653_66828704_66831253_66831312_66835762_66835847_66835942_66836075_66840002_66840116_66840210_66840248_66841023_66841111_66847192_66847349_66850830_66850921_66859410
transcript_136946.nnic	chr8	+	1280	7	NNC	ENSG00000104205.16	novel	666	7	NA	NA	2	4173	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	20.7819366010218	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGTGCCAATGTTGTTT	66774283	True	NA	NA	False	AATAAA	-19	NA	66775182	66826600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66825995
transcript_136949.known	chr8	+	666	7	FSM	ENSG00000104205.16	ENST00000522629.5	666	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	20.7819366010218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTATGCTGTCAAAGTGT	66774324	True	NA	NA	False	NA	NA	NA	66775223	66835794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66775320_66793615_66793833_66798541_66798626_66804374_66804448_66813852_66813929_66822371_66822460_66835762
transcript_13695.known	chr1	-	631	3	FSM	ENSG00000214796.9	ENST00000430114.2	1112	3	0	481	0	-481	multi-exon	FALSE	canonical	3	92	junction_1	48.5	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGATGCCGTGCATCATC	-202858692	True	NA	NA	False	AAAAAG	-14	NA	202861620	202857927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202858165_202858881_202859103_202861447
transcript_136950.known	chr8	+	1831	9	FSM	ENSG00000178460.18	ENST00000492775.5	1831	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAATTGAACAGATTATGT	66870776	False	NA	NA	False	AATAAA	-18	NA	66870789	66884622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_66870832_66874052_66874235_66874325_66874457_66874526_66874587_66877348_66877545_66878573_66878697_66878814_66878920_66880848_66880975_66883756
transcript_136965.known	chr8	-	479	4	FSM	ENSG00000245910.9	ENST00000520619.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	389.144646057935	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACATCACAATAAATTATG	-66926325	False	NA	-104	True	NA	NA	NA	66926398	66922017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66926197
transcript_136976.known	chr8	-	302	3	FSM	ENSG00000245910.9	ENST00000521399.6	366	3	4	60	0	-1	multi-exon	FALSE	canonical	3	174	junction_2	330.5	4590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTGGCTAACTTTTAAT	-66908738	True	NA	-73	True	AATAAA	-17	NA	66925541	66921986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922115_66922323_66922393_66925436
transcript_136982.known	chr8	-	638	4	FSM	ENSG00000245910.9	ENST00000520944.6	639	4	1	0	1	0	multi-exon	FALSE	canonical	3	651	junction_3	86.5036929205273	9379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGGGAGACATTGCTT	-66908793	True	NA	96	True	NA	NA	NA	66925596	66921817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922115_66922323_66922393_66922613_66922726_66925436
transcript_136983.known	chr8	-	560	2	FSM	ENSG00000245910.9	ENST00000521127.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTTAAGGGTGGGGGCAG	-66908738	True	NA	NA	False	NA	NA	NA	66925541	66922270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_66922726_66925436
transcript_136985.known	chr8	+	4302	18	FSM	ENSG00000104218.16	ENST00000678156.1	4302	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	17.8985994310084	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTATAATTGTTCCTATG	67062059	True	NA	NA	False	TATAAA	-3	NA	67064335	67166342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67064539_67074242_67074352_67076481_67076582_67086006_67086111_67091802_67091884_67093542_67093642_67095292_67095733_67118247_67118370_67118742_67118822_67131950_67132081_67137455_67137604_67149782_67149936_67154023_67154137_67158446_67158597_67158990_67159138_67161810_67161916_67163731_67163799_67164390
transcript_136995.known	chr8	-	400	3	FSM	ENSG00000178125.15	ENST00000520633.1	400	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTGGATTTGTTCTAA	-67028518	True	NA	NA	False	AATAAA	-17	NA	67028537	67010617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_67010832_67012957_67013097_67028490
transcript_136996.known	chr8	-	1296	8	FSM	ENSG00000121022.14	ENST00000357849.9	1296	8	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_7	43.1367072248692	6581	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCCTTTGATTTTTTTGT	-67055434	True	NA	NA	False	AATAAA	-17	NA	67062133	67043078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_67043318_67045811_67045961_67051229_67051342_67056518_67056605_67057379_67057446_67058082_67058212_67059210_67059446_67061853
transcript_136997.known	chr8	-	7320	39	FSM	ENSG00000066777.9	ENST00000262215.8	7320	39	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_34	56.6389217016315	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATAACCCACCCCCAT	-67340066	True	NA	-14	True	AATAAA	-33	NA	67343781	67197657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_67199099_67200395_67200514_67201466_67201606_67203082_67203252_67204679_67204820_67211482_67211616_67216589_67216663_67217781_67217921_67218002_67218139_67219430_67219561_67224902_67225034_67226022_67226184_67227136_67227310_67227446_67227599_67227962_67228133_67228223_67228265_67232854_67232946_67238342_67238494_67238734_67238894_67240161_67240291_67251298_67251451_67253450_67253623_67257731_67257817_67258084_67258291_67259814_67259927_67266005_67266208_67266875_67266985_67267090_67267231_67267342_67267443_67271701_67271937_67275975_67276110_67277281_67277458_67287954_67288066_67291846_67292124_67296430_67296611_67299208_67299356_67301223_67301381_67302435_67302467_67343163
transcript_137.known	SIRV1	+	702	3	FSM	SIRV1B	SIRV108	702	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	19.5	5700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAGACATAGGGCGTGG	NA	False	NA	NA	False	NA	NA	NA	10582	11606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_+_10792_10897_11188_11403
transcript_137001.known	chr8	+	1113	1	FSM	ENSG00000271966.1	ENST00000607397.1	1113	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCATTTCTTTTATTTTT	67343947	True	NA	NA	False	AATAAA	-15	NA	67343974	67345087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67344000_67345100
transcript_137002.known	chr8	+	550	2	FSM	ENSG00000255130.1	ENST00000526382.1	550	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGCAGTCTTTTTTTT	67732518	False	NA	NA	False	ATTAAA	-18	NA	67732586	67735665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67732666_67735194
transcript_137005.known	chr8	+	10824	40	FSM	ENSG00000046889.19	ENST00000288368.5	10824	40	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_38	12.2506691843144	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTTCTTTCCATTTAA	67951998	True	NA	12	True	AATAAA	-21	NA	67952045	68237032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_67952536_68017845_68017918_68019548_68019672_68022035_68022141_68027221_68027324_68030496_68030659_68038158_68038293_68044486_68044591_68053096_68053247_68055829_68055975_68060678_68060780_68069032_68069137_68069834_68069885_68072494_68072571_68077396_68077470_68080442_68080586_68080745_68080839_68083239_68083389_68087723_68087810_68090578_68090716_68093604_68093723_68097016_68097202_68099681_68099844_68108108_68108332_68109415_68109624_68115752_68115933_68118549_68118645_68119431_68119515_68120195_68120287_68120920_68121050_68127377_68127420_68134058_68134277_68138414_68138518_68146208_68146353_68157321_68157437_68191721_68191789_68192334_68192526_68217615_68217719_68224558_68224627_68231332
transcript_137010.nnic	chr8	+	602	5	NNC	ENSG00000165084.16	novel	2452	14	NA	NA	134652	287	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	2.1650635094611	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGCTTAAAATTTTTCTG	68760092	True	NA	NA	False	ATTAAA	-20	NA	68760110	68818561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_68760185_68776398_68776450_68787442_68787537_68815885_68815946_68818238
transcript_137012.known	chr8	-	1684	4	FSM	ENSG00000248801.7	ENST00000512294.7	1684	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.55902608401044	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCATTGAATAAAAATG	-68331344	True	NA	-39	True	NA	NA	NA	68331509	68303505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_68304802_68306517_68306599_68308859_68308964_68331306
transcript_137014.known	chr8	-	2842	3	FSM	ENSG00000248801.7	ENST00000660308.1	2842	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGGCATTATGAAATG	-68331346	True	NA	NA	False	AATGAA	-9	NA	68331511	68302245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_68304802_68306517_68306599_68331306
transcript_137015.nnic	chr8	-	859	3	NNC	ENSG00000248801.7	novel	1736	4	NA	NA	-1	-12103	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCACGGCCTAGAATT	-68331314	True	NA	NA	False	AATAAA	-20	NA	68331479	68316384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_68317013_68317425_68317484_68331306
transcript_137020.nic	chr8	+	2341	11	ISM	ENSG00000137573.14	ENST00000458141.6	5551	22	0	56720	0	6603	5prime_fragment	FALSE	canonical	2	67	junction_10	9.73087868591526	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTATCATGGGTGTAGA	69464973	True	NA	8	True	AATAAA	-22	NA	69466623	69604195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653_69601830_69603191_69603321_69603599
transcript_137026.nic	chr8	+	2183	9	ISM	ENSG00000137573.14	ENST00000458141.6	5551	22	0	58519	0	4804	5prime_fragment	FALSE	canonical	2	78	junction_4	7.06996287118964	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAGGATGTTTTGAATAA	69464973	True	NA	NA	False	CATAAA	-17	NA	69466623	69602396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_69466951_69501873_69501969_69563538_69563612_69563915_69564148_69575969_69576210_69586356_69586509_69588971_69589142_69600602_69600754_69601653
transcript_137035.known	chr8	+	1256	2	FSM	ENSG00000246528.4	ENST00000528800.3	1298	2	39	3	-24	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTCTTTCCTGATCTTC	69834047	True	NA	NA	False	AATAAA	-21	NA	69834128	69837829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_69834194_69836638
transcript_137036.known	chr8	+	828	2	FSM	ENSG00000246528.4	ENST00000501104.3	1315	2	24	463	21	-462	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAACATTCAGCAAGAAGC	69834029	True	NA	NA	False	AAAAAG	-42	NA	69834110	69837370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_69834207_69836638
transcript_13704.known	chr1	+	2321	3	FSM	ENSG00000234996.4	ENST00000456105.2	2321	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTCCATTTTCAAAAGTCT	202861287	True	NA	24	True	AATAAA	-21	NA	202861753	202875241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_202861810_202872199_202872280_202873056
transcript_137042.nnic	chr8	-	1946	8	NNC	ENSG00000147596.4	novel	2269	8	NA	NA	-75	1018	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	119.270914394114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTCGAGTCAGAGCTTC	-70065204	True	NA	-26	True	AATAAA	-21	NA	70071327	70050632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_70051327_70052018_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70071149
transcript_137045.known	chr8	-	2269	8	FSM	ENSG00000147596.4	ENST00000276594.3	2269	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_7	31.6518046040645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATTCCAACACTTTGGGA	-70065129	True	NA	NA	False	NA	NA	NA	70071252	70051650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70069160_70069885_70071149
transcript_137048.nnic	chr8	-	2385	7	NIC	ENSG00000147596.4	novel	2269	8	NA	NA	0	840	combination_of_known_splicesites	FALSE	canonical	3	24	junction_6	95.4767278217868	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAAAACTAGCCAGG	-70065129	True	NA	NA	False	NA	NA	NA	70071252	70050810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_70052305_70055299_70055402_70058639_70058843_70066234_70066506_70068229_70068388_70068478_70068533_70071149
transcript_13705.nnic	chr1	+	1469	2	NIC	ENSG00000234996.4	novel	2321	3	NA	NA	-23	120	combination_of_known_splicesites	FALSE	canonical	3	38	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGGTCCTTGAAGCTTG	202861264	True	NA	5	True	AATAAA	-21	NA	202861730	202874446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_202861810_202873056
transcript_137066.known	chr8	-	8430	23	FSM	ENSG00000140396.13	ENST00000452400.7	8430	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_22	11.1281045440723	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGCTTTAGAGATTTTAA	-70402960	True	NA	-20	True	AATAAA	-22	NA	70403808	70109781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70113644_70121301_70121392_70123883_70124083_70124687_70124866_70126812_70127048_70128432_70128511_70128701_70128981_70131836_70132003_70138202_70138333_70141183_70141400_70144641_70144849_70148272_70148484_70155970_70157241_70159504_70159653_70162710_70162855_70163464_70163567_70166565_70166755_70170201_70170380_70174755_70174860_70213902_70214076_70216659_70216765_70296743_70296801_70403699
transcript_137067.known	chr8	+	2367	4	FSM	ENSG00000253967.1	ENST00000520259.1	2367	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGCTCTGCGTTCAC	NA	False	NA	NA	False	AATAAA	-43	NA	70471133	70485687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_70471846_70478092_70478164_70480721_70481309_70484690
transcript_137069.known	chr8	-	3394	11	FSM	ENSG00000067167.8	ENST00000521425.5	3394	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_10	229.347792664329	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATCCTGGATGTTTCT	-70607717	False	NA	-12	True	AATAAA	-18	NA	70607778	70573441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70606876
transcript_137071.known	chr8	-	3056	11	FSM	ENSG00000067167.8	ENST00000262213.7	3056	11	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_6	40.2055966253456	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAAGGTGTCTCTTTATT	-70599412	True	NA	NA	False	AATAAA	-26	NA	70608416	70573217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70575006_70583163_70583325_70583649_70583794_70586894_70587000_70587105_70587177_70594505_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_13708.known	chr1	-	3119	2	FSM	ENSG00000183155.5	ENST00000367262.4	3119	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGAAGTAGGGGATGGGG	-202887027	True	NA	NA	False	NA	NA	NA	202889149	202878281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202881224_202888972
transcript_137080.nic	chr8	-	815	6	ISM	ENSG00000067167.8	ENST00000262213.7	3056	11	-23	21283	-23	0	5prime_fragment	FALSE	canonical	3	716	junction_1	51.7014506566305	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATTTTGTAGTGTTAA	-70608378	False	NA	NA	False	AAAAAG	-5	NA	70608439	70594500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_70594591_70596262_70596322_70597894_70598012_70598133_70598256_70600018_70600083_70608076
transcript_137087.known	chr8	-	1526	7	FSM	ENSG00000147592.9	ENST00000276590.5	1526	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5669482563998	696	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATATGATAAATAATTATT	-70666531	True	NA	99	True	ATTAAA	-17	NA	70669185	70637265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_70637904_70638547_70638630_70640901_70641051_70644064_70644244_70657755_70657883_70661733_70661898_70668998
transcript_137088.known	chr8	+	3200	5	FSM	ENSG00000221947.8	ENST00000408926.8	3200	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.80277563773199	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	70669312	True	NA	NA	False	AATAAA	-23	NA	70669338	70735942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_70669539_70674817_70674900_70680780_70681331_70706932_70707154_70733795
transcript_137096.nnic	chr8	-	465	3	NNC	ENSG00000104313.20	novel	837	2	NA	NA	-56	2834	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACATACTTGATGTTCTT	-71592032	True	NA	NA	False	ATTAAA	-25	NA	71592081	71565338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_71565470_71568724_71568928_71591950
transcript_137108.known	chr8	+	473	3	FSM	ENSG00000254277.2	ENST00000521131.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	54	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGGAAACAACAAAAATGT	71663462	False	NA	NA	False	AGTAAA	-15	NA	71675376	71702435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71675536_71695940_71696034_71702214
transcript_13711.known	chr1	-	3311	12	FSM	ENSG00000117153.16	ENST00000367261.8	3311	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	28.1782989004947	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCGAGAGTTTGTGGCTAA	-202925377	True	NA	-22	True	ATTAAA	-17	NA	202927234	202891119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202892660_202893238_202893426_202894183_202894283_202894590_202894750_202895521_202895718_202896853_202896961_202909009_202909125_202911053_202911204_202918170_202918389_202919754_202919909_202924967_202925208_202927088
transcript_137113.nnic	chr8	+	690	3	FSM	ENSG00000254277.2	ENST00000693596.1	452	3	-242	4	-193	-4	multi-exon	FALSE	canonical	3	67	junction_1	73.5	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACTGGAAACAACAAAA	71675093	False	NA	NA	False	AGTAAA	-11	NA	71675106	71702431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71675536_71697626_71697671_71702214
transcript_137125.known	chr8	+	808	2	FSM	ENSG00000254277.2	ENST00000519840.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	0	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTGTGTTTTCAGT	71663385	True	NA	NA	False	NA	NA	NA	71675299	71702786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71675536_71702214
transcript_137126.known	chr8	+	5653	4	FSM	ENSG00000235531.11	ENST00000656742.1	5653	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCAATGTAGATTGACTT	71844017	True	NA	NA	False	ATTAAA	-24	NA	71844113	71971833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_71844423_71962922_71963049_71965408_71965535_71966741
transcript_137127.known	chr8	-	1956	2	FSM	ENSG00000178860.9	ENST00000325509.5	1956	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCCTTGGAGGTGTCAGG	-71844136	True	NA	-17	True	AATAAA	-43	NA	71844412	71841559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_71842748_71843644
transcript_137136.known	chr8	+	2933	10	FSM	ENSG00000147601.15	ENST00000678997.1	2933	10	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	2048.54521701935	3254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCCTATATATAAACAGAA	72959189	True	NA	-14	True	NA	NA	NA	73008863	73047711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73012855_73012932_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_137168.known	chr8	+	3329	10	FSM	ENSG00000147601.15	ENST00000276603.10	3329	10	0	0	0	0	multi-exon	FALSE	canonical	3	1645	junction_7	1424.6238836537	6259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCCAGTCTGAGTATT	72959189	True	NA	10	True	AATATA	-15	NA	73008863	73048123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73045960
transcript_137169.known	chr8	+	3268	9	FSM	ENSG00000147601.15	ENST00000276602.10	3268	9	0	0	0	0	multi-exon	FALSE	canonical	3	3332	junction_6	606.236082314473	8389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTCTCCAGTCTGAGTAT	72959189	True	NA	9	True	AATATA	-14	NA	73008863	73048122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73039115_73039220_73045960
transcript_137170.known	chr8	+	2715	10	FSM	ENSG00000147601.15	ENST00000678860.1	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_8	2013.86725812138	5379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959189	True	NA	NA	False	AATAAA	-7	NA	73008863	73047479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73032041_73032134_73038705_73038796_73039115_73039220_73045960
transcript_137171.known	chr8	+	801	5	FSM	ENSG00000147601.15	ENST00000518874.6	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2183.20914882198	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTAATTTAATCAATTT	72959202	True	NA	76	True	AAAAAG	-1	NA	73008876	73027052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73020683_73020806_73022215_73022303_73024821_73024972_73026939
transcript_137172.known	chr8	+	2764	11	FSM	ENSG00000147601.15	ENST00000679115.1	2764	11	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_9	2054.7239230612	2315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATACCTTACTAAACA	72959185	True	NA	NA	False	AATAAA	-7	NA	73008859	73047479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73009206_73013894_73013991_73020683_73020806_73022215_73022303_73024821_73024972_73026939_73027053_73030335_73030396_73032041_73032134_73039115_73039220_73039544_73039620_73045960
transcript_137190.known	chr8	-	1233	7	FSM	ENSG00000147604.14	ENST00000352983.7	1233	7	0	0	0	0	multi-exon	FALSE	canonical	3	22642	junction_1	5489.87466968863	115497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTTCTTGTTTTGC	-73216371	True	NA	0	True	TATAAA	-38	NA	73293633	73290241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73290706_73291042_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293598
transcript_137191.known	chr8	-	534	2	FSM	ENSG00000147604.14	ENST00000487500.2	534	2	0	0	0	0	multi-exon	FALSE	canonical	3	22642	junction_1	0	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTTCCTTTTGCA	-73291120	False	NA	-25	True	TATAAA	-13	NA	73291137	73290266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73290706_73291042
transcript_137192.known	chr8	-	1308	6	FSM	ENSG00000147604.14	ENST00000396465.5	1308	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	14506.070108751	1070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGACCTCATCCTGAGA	-73294198	True	NA	NA	False	AATGAA	-7	NA	73294438	73291041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73291253_73291551_73291662_73291772_73291911_73292238_73292406_73292688_73292798_73293865
transcript_137203.known	chr8	-	2173	11	FSM	ENSG00000040341.18	ENST00000522509.5	2173	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	129.854880539778	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCCTTTTTTTACATA	-73747679	False	NA	NA	False	NA	NA	NA	73747708	73551642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73747386
transcript_137205.known	chr8	-	1603	10	FSM	ENSG00000040341.18	ENST00000523558.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	151.15416053458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGATCCTGCTACTGG	-73742413	True	NA	42	True	NA	NA	NA	73746840	73421129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73746782
transcript_13721.nnic	chr1	-	2041	8	NNC	ENSG00000159346.13	novel	2091	8	NA	NA	278	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	386.638047263635	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-202956023	False	NA	-9	True	AATAAA	-31	NA	202957986	202940831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202957908
transcript_137219.known	chr8	-	4061	12	FSM	ENSG00000040341.18	ENST00000355780.9	4061	12	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_2	45.3677352857587	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTTTTAACTTTTAA	-73742413	True	NA	-19	True	AGTAAA	-23	NA	73746840	73549603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_137220.known	chr8	-	2173	6	FSM	ENSG00000040341.18	ENST00000524104.5	2173	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	138.278559437101	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTAGTAAGTAATGCAT	-73742413	True	NA	-3	True	ATTAAA	-29	NA	73746840	73652256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73653897_73673106_73673243_73688653_73688814_73738283_73738350_73739755_73739869_73746782
transcript_137221.known	chr8	-	2970	15	FSM	ENSG00000040341.18	ENST00000524300.6	2970	15	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_12	137.123826804648	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGTTGTTGTTCTTTTG	-73742413	True	NA	-4	True	AGTAAA	-24	NA	73746840	73420368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73421466_73422613_73422703_73552011_73552320_73582769_73582831_73595165_73595298_73603725_73603864_73613743_73613957_73615674_73615783_73617291_73617452_73673106_73673243_73688653_73688814_73709031_73709163_73738283_73738350_73739755_73739869_73746782
transcript_137225.known	chr8	-	2268	7	FSM	ENSG00000104343.21	ENST00000651945.1	2268	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	119.512435429215	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAATTAAAAC	-73872742	True	NA	-34	True	NA	NA	NA	73878862	73792362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73870268_73870302_73878807
transcript_137228.nnic	chr8	-	736	6	NNC	ENSG00000258677.2	novel	776	8	NA	NA	-56	-87631	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	101.996078355984	74	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTTTGTGGTACTTTAT	-73872790	True	NA	-3	True	AATAAA	-19	NA	73878910	73776321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_73776528_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_13723.known	chr1	-	2091	8	FSM	ENSG00000159346.13	ENST00000340990.10	2091	8	0	0	0	0	multi-exon	FALSE	canonical	3	985	junction_3	60.9516369002205	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCACATGTATGGTCTT	-202947405	True	NA	-9	True	AATAAA	-31	NA	202958312	202940831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202941702_202942024_202942219_202943757_202943946_202944982_202945170_202946438_202946611_202948303_202948421_202950929_202951165_202958184
transcript_137232.nnic	chr8	-	843	6	NNC	ENSG00000104343.21	novel	850	5	NA	NA	0	-413	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	101.235566872518	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTTCATACTATCTAT	-73872790	True	NA	NA	False	AATAAA	-33	NA	73878910	73780509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_73780823_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_137235.known	chr8	-	8426	6	FSM	ENSG00000104343.21	ENST00000517608.5	8426	6	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	31.5467906450086	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGTTTTGGCTTTTTTTA	-73872790	True	NA	-3	True	AATAAA	-17	NA	73878910	73786219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73825146_73825250_73830380_73830473_73878807
transcript_137244.known	chr8	-	3903	5	FSM	ENSG00000104343.21	ENST00000422906.6	3903	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	97.7941076957094	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATGGTTACTGCTGC	-73872755	True	NA	-12	True	AATAAA	-24	NA	73878875	73790604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73794116_73805650_73805727_73810473_73810630_73830380_73830473_73878807
transcript_137247.known	chr8	-	850	5	FSM	ENSG00000104343.21	ENST00000523278.5	850	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	116.558997936667	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCAGTTTGAACTACTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	73830474	73780096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73780518_73805650_73805727_73810473_73810630_73825146_73825250_73830380
transcript_137254.known	chr8	-	719	6	FSM	ENSG00000154582.18	ENST00000523815.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	1781.98496065483	1167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGAACTATATAAAGTTC	-73971894	False	26019	45	True	NA	NA	NA	73971908	73946533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73970578_73970635_73971869
transcript_13726.known	chr1	-	1624	9	FSM	ENSG00000159348.13	ENST00000367249.9	1624	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	9.32402809948576	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTGTTGTGTCTGGGGTC	-202965294	True	NA	-4	True	AATAAA	-31	NA	202967257	202961872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966527_202966601_202966748_202966899_202967190
transcript_13727.known	chr1	-	863	8	FSM	ENSG00000159348.13	ENST00000482572.5	863	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	35.2113154354375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGCGATTCACCTACTGA	-202965280	True	NA	NA	False	NA	NA	NA	202967243	202962546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_202962700_202963065_202963166_202963641_202963728_202964611_202964696_202965370_202965501_202965886_202965994_202966748_202966899_202967190
transcript_137281.known	chr8	-	1976	5	FSM	ENSG00000154582.18	ENST00000622804.2	1992	5	44	-28	0	-19	multi-exon	FALSE	canonical	3	18	junction_4	1850.40738757712	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-73971894	False	26019	NA	False	NA	NA	NA	73971908	73945137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578_73970635_73971869
transcript_137322.known	chr8	-	634	5	FSM	ENSG00000154582.18	ENST00000519082.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_4	1756.52049518359	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAATTCCCAATTGCAC	-73946233	True	NA	-121	True	NA	NA	NA	73972252	73946699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73964486_73964626_73972076
transcript_137323.known	chr8	-	1451	3	FSM	ENSG00000154582.18	ENST00000520210.1	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1899.5	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCATTCAGCTTTTCTATT	-73946151	True	NA	2	True	AATAAA	-37	NA	73972170	73945607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73972076
transcript_137324.known	chr8	-	2015	4	FSM	ENSG00000154582.18	ENST00000520242.6	2015	4	0	0	0	0	multi-exon	FALSE	canonical	3	2357	junction_3	664.922551881044	10223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACTGGCCTAATATG	-73946172	True	NA	NA	False	NA	NA	NA	73972191	73945118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972076
transcript_137325.known	chr8	-	683	4	FSM	ENSG00000154582.18	ENST00000284811.12	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	1721.28756716851	2467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTAGGTGGTTTTGCCTT	-73946087	True	NA	-10	True	AATAAA	-13	NA	73972106	73946400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73972041
transcript_137326.known	chr8	-	814	4	ISM	ENSG00000154582.18	ENST00000622804.2	1992	5	1315	1098	1271	137	3prime_fragment	FALSE	canonical	3	45	junction_3	1740.99058648294	1723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAGAAACCTAATCT	-73970623	False	NA	NA	False	NA	NA	NA	73970637	73946263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_73946821_73955910_73956055_73959764_73959819_73970578
transcript_137327.known	chr8	-	816	5	FSM	ENSG00000154582.18	ENST00000522337.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	1847.14365643282	1166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATTTGTTTGCTAC	-73946213	True	NA	-82	True	NA	NA	NA	73972232	73946472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_73946821_73955910_73956055_73959764_73959819_73969559_73969674_73972076
transcript_137329.known	chr8	+	928	4	FSM	ENSG00000175606.11	ENST00000416961.6	928	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	132.467186712618	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTGAAGAGAAACGGCAT	73970272	True	NA	NA	False	AAGAAA	-1	NA	73976194	73981586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_73976492_73978755_73978862_73979078_73979172_73981154
transcript_137332.known	chr8	+	2471	7	FSM	ENSG00000104381.14	ENST00000434412.3	2471	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.2248992175074	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGTAGCAGCTTTTATAA	74346824	True	NA	16	True	AATAAA	-31	NA	74350402	74365834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74351453_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_137334.known	chr8	+	3500	6	FSM	ENSG00000104381.14	ENST00000675625.1	3500	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	52.1359760626	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAAAGTACTCACTTTG	74346816	True	NA	NA	False	AATAAA	-28	NA	74350394	74366868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_137336.known	chr8	+	3616	6	FSM	ENSG00000104381.14	ENST00000675165.1	3616	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.9312297331855	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATATGAACCCTAA	74346824	True	NA	NA	False	AATAAA	-10	NA	74350402	74366850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74363987
transcript_137338.known	chr8	+	945	6	FSM	ENSG00000104381.14	ENST00000676207.1	945	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	52.6513057767801	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	74346834	True	NA	NA	False	AATAAA	-25	NA	74350412	74488879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351467_74360136_74360311_74361883_74361979_74362938_74363054_74488677
transcript_137339.known	chr8	+	3606	5	FSM	ENSG00000104381.14	ENST00000675821.1	3606	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	67.4291294619766	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATGAACCCTAAAACAAAG	74320569	True	NA	NA	False	AATAAA	-17	NA	74320612	74366857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74320962_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_137344.known	chr8	+	3407	5	FSM	ENSG00000104381.14	ENST00000675220.1	3407	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.2582412606712	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAATTGGAAAATAAATAT	74320983	True	NA	NA	False	AATAAA	-1	NA	74321079	74366841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74321246_74360136_74360311_74361883_74361979_74362938_74363054_74363984
transcript_137345.known	chr8	+	964	5	FSM	ENSG00000104381.14	ENST00000676120.1	964	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	63.7436271324436	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTCTTTTTTTTTTTTT	74346867	True	NA	NA	False	NA	NA	NA	74350445	74362777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362263
transcript_137346.known	chr8	+	4137	5	FSM	ENSG00000104381.14	ENST00000674944.1	4137	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	48.882512210401	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCCAAAATTTGTATAAAT	74346824	True	NA	NA	False	NA	NA	NA	74350402	74366582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74360136_74360311_74361883_74361979_74362938
transcript_137347.known	chr8	+	3273	5	FSM	ENSG00000104381.14	ENST00000675336.1	3273	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	70.1654295219519	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTAAGATCAATAAAAG	74346824	True	NA	NA	False	NA	NA	NA	74350402	74366823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74361883_74361979_74362938_74363054_74363984
transcript_137351.known	chr8	+	541	4	FSM	ENSG00000104381.14	ENST00000524195.2	541	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.8108555710038	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTATCTTATTTTGTAT	74346824	True	NA	NA	False	AATAAA	-25	NA	74350402	74488879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74350579_74351273_74351322_74362938_74363054_74488677
transcript_137352.known	chr8	-	590	2	FSM	ENSG00000253596.1	ENST00000521872.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTTTATTTCTTTATG	-74350005	False	NA	NA	False	AATATA	-2	NA	74350050	74347756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_74348206_74349909
transcript_137353.nic	chr8	+	697	6	ISM	ENSG00000254349.6	ENST00000523442.5	550	7	7	64963	7	-2	5prime_fragment	FALSE	canonical	0	0	junction_2	4.40908153700972	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAATTGTCCTGCATATT	74599509	True	NA	NA	False	AATAAA	-23	NA	74599787	74758350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_74599909_74612852_74612941_74702378_74702457_74703605_74703683_74752440_74752534_74758110
transcript_137355.nnic	chr8	+	690	5	NNC	ENSG00000254349.6	novel	2125	6	NA	NA	22	1728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.9180788932265	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGGATGTAAAAGTCATATA	74599524	True	NA	NA	False	AGTAAA	-18	NA	74599802	74705407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_74599909_74612852_74612941_74702378_74702457_74703605_74703683_74705066
transcript_137358.known	chr8	+	2125	6	FSM	ENSG00000254349.6	ENST00000523118.5	2125	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.53431361950185	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGTCCTGCATATTCT	74599587	True	NA	NA	False	AATAAA	-25	NA	74599865	74758352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74599909_74612852_74612941_74702378_74702457_74703605_74703683_74752440_74752534_74756606
transcript_137363.nnic	chr8	-	1185	5	NNC	ENSG00000253706.5	novel	454	4	NA	NA	-36	-1849	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	21.9658826364888	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCCTTTTTCTAATCC	-74866764	True	NA	NA	False	AATAAA	-15	NA	74866975	74817899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_74818669_74844924_74845036_74845876_74845954_74866517_74866635_74866864
transcript_137368.known	chr8	-	773	4	FSM	ENSG00000253706.5	ENST00000523860.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	21.9241115365405	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTTCAATTGAGGT	-74866714	True	NA	NA	False	TTTAAA	-28	NA	74866925	74798783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_74799320_74818609_74818669_74866517_74866635_74866864
transcript_137373.nnic	chr8	-	597	3	NNC	ENSG00000253706.5	novel	773	4	NA	NA	-46	87130	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	28	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGACTGGATACTACATTTG	-74866774	True	NA	NA	False	AATAAA	-21	NA	74866985	74711653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_74712013_74866517_74866635_74866864
transcript_137375.nnic	chr8	-	801	3	NIC	ENSG00000253706.5	novel	773	4	NA	NA	-100	-27	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	27	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCCCTCCATTTCTTTT	NA	False	NA	NA	False	ATTAAA	-27	NA	74867039	74798810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_74799320_74866517_74866635_74866864
transcript_137376.nnic	chr8	-	692	3	NIC	ENSG00000253706.5	novel	773	4	NA	NA	-100	-136	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	27	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACTAACACTACTTTTA	NA	False	NA	-1	True	AATAAA	-19	NA	74867039	74798919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_74799320_74866517_74866635_74866864
transcript_137377.known	chr8	-	2810	3	FSM	ENSG00000253706.5	ENST00000518128.5	2810	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	23.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAGAAGGAACTATGTTG	-74866728	True	NA	NA	False	AATAAA	-17	NA	74866939	74816050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_74818669_74866517_74866635_74866864
transcript_137379.known	chr8	+	4297	15	FSM	ENSG00000121005.9	ENST00000262207.9	4297	15	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_14	26.309868560551	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACCATTGTAATTATTT	74983020	True	NA	64	True	ATTAAA	-27	NA	74984504	75034558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_74984921_74985925_74986246_75012432_75012552_75012889_75013023_75013986_75014103_75014811_75014913_75016564_75016706_75016880_75016942_75017046_75017114_75017319_75017451_75019869_75019914_75020006_75020080_75025545_75025622_75029386_75029518_75032190
transcript_137392.nnic	chr8	-	544	3	NIC	ENSG00000249395.4	novel	668	3	NA	NA	88	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACGTTTGTGGTCATT	-75278820	True	NA	NA	False	AATAAA	-16	NA	75278836	75120412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_75120708_75278356_75278482_75278712
transcript_137396.known	chr8	-	1120	3	FSM	ENSG00000249395.4	ENST00000521147.2	1120	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAAAGAAAAGAAGAGG	-75324327	True	NA	NA	False	NA	NA	NA	75324653	75223452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75278356_75278482_75324564
transcript_137397.known	chr8	-	1484	3	FSM	ENSG00000249395.4	ENST00000675897.1	1484	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAAAATTCTATAGCTAA	NA	False	NA	-18	True	AATAAA	-12	NA	75324711	75223134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75324220_75324334_75324564
transcript_137398.nnic	chr8	-	605	3	NNC	ENSG00000249395.4	novel	668	3	NA	NA	-1	-89701	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTTTTCCTGACTGGACCC	-75324367	True	NA	NA	False	ATTAAA	-17	NA	75324693	75313372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_75313736_75324220_75324334_75324564
transcript_137399.nnic	chr8	-	768	2	NIC	ENSG00000249395.4	novel	668	3	NA	NA	95	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACGTTTGTGGTCATT	-75278813	False	NA	NA	False	AATAAA	-16	NA	75278829	75120412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_75120708_75278356
transcript_137401.known	chr8	-	1513	2	FSM	ENSG00000249395.4	ENST00000670695.1	1513	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	-75278621	False	NA	-10	True	AATAAA	-20	NA	75278637	75223126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75278356
transcript_137402.known	chr8	-	1704	2	FSM	ENSG00000249395.4	ENST00000669950.1	1704	2	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATAGCTAATGGAAGTG	-75324366	True	NA	-10	True	AATAAA	-20	NA	75324692	75223126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75324220
transcript_137403.known	chr8	-	1218	2	FSM	ENSG00000249395.4	ENST00000654852.2	1218	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCCAAGCGACATCATT	NA	False	NA	NA	False	AATAAA	-12	NA	75324741	75223317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75224359_75324564
transcript_137404.known	chr8	-	386	1	FSM	ENSG00000249395.4	ENST00000675539.1	386	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACGTTTGTGGTCATT	NA	False	NA	NA	False	AATAAA	-16	NA	75120798	75120412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_75120400_75120800
transcript_137408.nnic	chr8	+	739	4	NNC	ENSG00000164749.13	novel	470	5	NA	NA	-32	-13548	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.49443825784929	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATCTTTGCATTTTTAT	75407600	True	NA	NA	False	AATAAA	-22	NA	75407881	75513586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_75407965_75485784_75485817_75490088_75490209_75513082
transcript_137410.nnic	chr8	+	710	3	NNC	ENSG00000164749.13	novel	470	5	NA	NA	-35	-13548	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	1.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATCTTTGCATTTTTAT	75407597	True	NA	NA	False	AATAAA	-22	NA	75407878	75513586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_75407965_75490088_75490209_75513082
transcript_137413.nnic	chr8	-	551	5	NNC	ENSG00000287352.1	novel	1177	3	NA	NA	-289	8245	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.80409338312195	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGGTAGGCAAATTGC	-76308339	True	NA	NA	False	AATAAA	-18	NA	76308604	76153873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_76153998_76154087_76154179_76162960_76163015_76306337_76306468_76308452
transcript_137414.nnic	chr8	-	1178	3	NNC	ENSG00000287352.1	novel	1177	3	NA	NA	-289	0	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_1	3.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTTCACTTAATTCTT	-76308339	True	NA	NA	False	NA	NA	NA	76308604	76162118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_76163015_76306337_76306468_76308452
transcript_137420.known	chr8	-	4169	4	FSM	ENSG00000164751.15	ENST00000357039.9	4169	4	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	10.2306728354819	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTGTATTATTTTGATAG	-76997150	True	NA	NA	False	AATAAA	-23	NA	77000078	76980257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_76984196_76986186_76986297_76988306_76988339_76999989
transcript_137423.known	chr8	-	1627	3	FSM	ENSG00000164751.15	ENST00000522527.5	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	90	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGGATTCTAAAGATAAAG	-77000255	False	NA	-51	True	AAAACA	-3	NA	77000267	76982956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_76984196_76986186_76986297_76999989
transcript_137427.known	chr8	+	558	2	FSM	ENSG00000254001.5	ENST00000521879.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTCTTTCTTTCCATTA	NA	False	NA	NA	False	AATAAA	-18	NA	78148100	78153913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78148283_78153537
transcript_137432.known	chr8	+	3962	4	FSM	ENSG00000171033.13	ENST00000396418.7	3962	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	36.9173250505625	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTCTATTAAGAGTATT	78513256	True	NA	9	True	ATTAAA	-25	NA	78516339	78605267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78516469_78572810_78572940_78598357_78598536_78601741
transcript_137434.known	chr8	+	1736	3	FSM	ENSG00000171033.13	ENST00000352966.9	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	96.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGTGGTAATAAATAAGG	78513271	True	NA	-23	True	NA	NA	NA	78516354	78603185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78516469_78598357_78598536_78601741
transcript_13744.known	chr1	+	3031	8	FSM	ENSG00000163444.12	ENST00000367242.4	3031	8	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_3	189.042269325769	693	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGACTCAGCTCTGAGTT	202986615	True	NA	NA	False	AATAAA	-19	NA	203007373	203024848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203007575_203007773_203007864_203008642_203008811_203014888_203015049_203015959_203016141_203018480_203018562_203020792_203020949_203022854
transcript_137442.known	chr8	+	3310	9	FSM	ENSG00000104427.12	ENST00000263849.9	3310	9	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_7	25.8647322622911	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAGTTCGTATTCACTGA	78662936	True	NA	14	True	AATAAA	-18	NA	78666088	78719765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78666165_78675786_78675864_78678562_78678680_78686466_78686609_78689221_78689374_78697406_78697507_78698413_78698514_78715220_78715329_78717327
transcript_137454.known	chr8	+	981	3	FSM	ENSG00000104427.12	ENST00000521873.1	981	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTCCCATGTGCTTTA	78662936	True	NA	NA	False	NA	NA	NA	78666088	78679390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78666165_78675786_78675864_78678562
transcript_137456.known	chr8	+	601	5	FSM	ENSG00000104427.12	ENST00000519307.1	601	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	50.4300257783	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAAAAAAAAAAAAGCCAA	NA	False	NA	NA	False	AATAGA	-5	NA	78697405	78717502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_78697507_78698413_78698514_78711989_78712107_78715220_78715329_78717327
transcript_137458.known	chr8	+	1903	5	FSM	ENSG00000104435.14	ENST00000220876.12	1903	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	1.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAAGGTTTGGTCTGTTCTC	79610856	True	NA	NA	False	AATAAA	-23	NA	79611116	79666158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_79611215_79636801_79636898_79641377_79641551_79654870_79655063_79664814
transcript_137461.nnic	chr8	+	521	3	NNC	ENSG00000104435.14	novel	1903	5	NA	NA	0	-48872	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTTACTTCTTCATC	79610856	True	NA	NA	False	AATAAA	-19	NA	79611116	79616009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_79611215_79613822_79613938_79615701
transcript_137463.nnic	chr8	+	484	2	NNC	ENSG00000104435.14	novel	1903	5	NA	NA	0	-47674	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTTTCTAAGGAAGT	79610856	True	NA	NA	False	AATAAA	-18	NA	79611116	79617207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_79611215_79616821
transcript_137464.known	chr8	-	2296	5	FSM	ENSG00000164683.18	ENST00000337919.9	2296	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	7.53325958665968	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTCTGTGGTGTATGTCT	-79767415	True	NA	NA	False	AATAAA	-15	NA	79767857	79764012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79765772_79766650_79766733_79766996_79767093_79767218_79767295_79767574
transcript_137466.known	chr8	+	571	3	FSM	ENSG00000272138.3	ENST00000607754.3	618	3	0	47	0	-43	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTGTGGATGTATTAT	79783595	True	NA	NA	False	ATTAAA	-14	NA	79783638	79802799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_79783767_79800560_79800691_79802486
transcript_137470.known	chr8	-	411	4	FSM	ENSG00000147586.10	ENST00000520946.1	411	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	279.072670742865	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCAGGAGAGTAAAGACT	-80023418	False	6556	NA	False	NA	NA	NA	80029974	79919031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003121_80028694_80028797_80029904
transcript_137476.known	chr8	-	487	4	FSM	ENSG00000147586.10	ENST00000518271.1	487	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	276.529684964683	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGTTGCGGCTATTAGATC	-80023676	False	NA	NA	False	NA	NA	NA	80030232	79919124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80028694_80028797_80030053
transcript_13748.known	chr1	+	924	4	FSM	ENSG00000163444.12	ENST00000543891.5	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	1032	junction_2	229.948303368871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGCCATTCCAGAAAGCA	202986644	True	NA	NA	False	NA	NA	NA	203007402	203016094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203007864_203008642_203008811_203014888_203015049_203015959
transcript_137483.known	chr8	-	555	3	FSM	ENSG00000147586.10	ENST00000519386.5	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	294	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTATTAGAATTTTCTTT	-80023283	False	NA	NA	False	AATAAA	-23	NA	80029839	79918854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80029760
transcript_13749.known	chr1	-	494	2	FSM	ENSG00000133063.16	ENST00000479483.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGAATAGTAAGTGAATTA	NA	False	NA	NA	False	AATAAA	-10	NA	203218021	203212834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_203213046_203217738
transcript_137491.known	chr8	-	437	2	FSM	ENSG00000147586.10	ENST00000521605.1	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATTGACTCCTTTGCTG	-80023733	True	NA	NA	False	AATAAA	-14	NA	80030289	79918965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80030035
transcript_137493.known	chr8	-	838	3	FSM	ENSG00000147586.10	ENST00000276585.9	838	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_2	191	6401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCATGGTACTAGTTTAA	-80023703	True	NA	-4	True	AATAAA	-21	NA	80030259	79918716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80030035
transcript_137494.known	chr8	-	403	3	FSM	ENSG00000147586.10	ENST00000519120.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	266.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATAAATGAACTTTGCT	-80023408	False	6556	NA	False	AGTAAA	-29	NA	80029964	79918987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_79919149_80002998_80003181_80029904
transcript_1375.known	chr1	-	378	3	FSM	ENSG00000226944.1	ENST00000455744.1	378	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATATTTGAGCTGTTTTCG	-6205729	False	NA	-4	True	AATAAA	-19	NA	6205780	6204839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6204983_6205205_6205414_6205753
transcript_13750.known	chr1	+	1275	3	FSM	ENSG00000159388.6	ENST00000475157.1	1275	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTACTTTAATAAAAAT	203304612	True	NA	-18	True	NA	NA	NA	203305490	203309569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203305749_203307103_203307689_203309137
transcript_137508.known	chr8	+	676	4	FSM	ENSG00000164687.11	ENST00000297258.11	676	4	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_2	232.626070956995	12125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATCTTGTATGCATTCTT	81274885	True	NA	NA	False	AATAAA	-19	NA	81280535	81284775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_81280675_81283365_81283539_81283872_81283975_81284513
transcript_13751.known	chr1	+	2729	2	FSM	ENSG00000159388.6	ENST00000290551.5	2729	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGGTGTAGAGAAGT	203304640	True	NA	15	True	AATAAA	-17	NA	203305518	203309602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203305749_203307103
transcript_137512.known	chr8	-	620	2	FSM	ENSG00000254027.1	ENST00000518880.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCATTCAAGAATGTTTGA	-81281397	True	NA	NA	False	ACTAAA	-36	NA	81281446	81279870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81280377_81281332
transcript_137515.known	chr8	-	1180	10	FSM	ENSG00000133731.10	ENST00000449740.6	1180	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	63.7926811855365	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTAAATTCTCTTTGTCC	-81683929	True	NA	NA	False	NA	NA	NA	81686283	81659261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81685762_81685964_81686251
transcript_137522.known	chr8	-	3369	9	FSM	ENSG00000133731.10	ENST00000256108.10	3369	9	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_2	15.352117117844	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAATTGTGTTCATTCTAT	-81683971	True	NA	NA	False	CATAAA	-44	NA	81686325	81656913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81659467_81660515_81660668_81670938_81671048_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_137523.known	chr8	-	1106	8	FSM	ENSG00000133731.10	ENST00000311489.8	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	65.212681876695	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGAAATTTTGACTTAG	-81683947	True	NA	NA	False	NA	NA	NA	81686301	81659043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81659467_81660515_81660668_81673840_81673950_81676233_81676280_81679125_81679231_81680649_81680784_81681497_81681585_81686251
transcript_13753.known	chr1	+	5769	3	FSM	ENSG00000188783.6	ENST00000343110.3	5769	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCGCTTC	203475779	True	NA	NA	False	AATAAA	-22	NA	203475805	203491352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203475939_203483168_203484158_203486705
transcript_137536.known	chr8	-	772	7	FSM	ENSG00000104231.11	ENST00000521287.5	772	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	150.368436404276	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGTCAGAAATCACAGGGA	-81717133	True	NA	NA	False	NA	NA	NA	81721295	81702681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721248
transcript_137544.known	chr8	-	540	6	FSM	ENSG00000104231.11	ENST00000523361.5	540	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	156.948399163547	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTACCTAAAGGGAGCAAAG	-81732762	True	NA	NA	False	NA	NA	NA	81732881	81703098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81732752
transcript_137546.known	chr8	+	1852	5	FSM	ENSG00000164695.5	ENST00000297265.5	1852	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	6.34428877022476	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGCCGTTATTATTTTT	81731523	True	NA	NA	False	AATAAA	-2	NA	81732447	81759515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_81732817_81753063_81753242_81755369_81755485_81758141_81758296_81758479
transcript_13755.known	chr1	+	1434	8	FSM	ENSG00000188770.10	ENST00000367222.7	1434	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.39970842444753	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAGCCCACACAGAACG	203494108	True	NA	88	True	NA	NA	NA	203494152	203508949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203494218_203495964_203496237_203496976_203497116_203498680_203498840_203499648_203499852_203502913_203503010_203503549_203503746_203508645
transcript_137550.known	chr8	-	2184	8	FSM	ENSG00000104231.11	ENST00000220669.10	2184	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	52.9146405418526	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTAATAATATCTGAGCCT	-81717138	True	NA	NA	False	AGTAAA	-23	NA	81721300	81701336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_137551.known	chr8	-	1778	8	FSM	ENSG00000104231.11	ENST00000523096.5	1778	8	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	117.569085204906	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTATTTCCTTTCTA	-81717138	True	NA	-10	True	AATAAA	-14	NA	81721300	81701721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703104_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_137552.known	chr8	-	1705	7	FSM	ENSG00000104231.11	ENST00000522520.5	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	95.9073627112237	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCTATAGGTTTACTTAA	-81717127	True	NA	-53	True	NA	NA	NA	81721289	81701764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_137553.known	chr8	-	633	6	FSM	ENSG00000104231.11	ENST00000517588.5	633	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	99.7484836977485	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717101	True	NA	-3	True	AATAAA	-18	NA	81721263	81702913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81718181_81718225_81721226
transcript_137554.known	chr8	-	698	7	FSM	ENSG00000104231.11	ENST00000519523.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	51.6346675101999	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGCATGTTTATTTATT	-81717126	True	NA	-3	True	AATAAA	-18	NA	81721288	81702913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81703125_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_137555.known	chr8	-	1006	9	FSM	ENSG00000104231.11	ENST00000519464.5	1006	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	146.102489711846	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGTTTTTTGGTTTTAA	-81717125	True	NA	-26	True	TTTAAA	-15	NA	81721287	81702543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81702866_81702968_81703125_81708787_81708830_81713917_81714040_81714803_81714896_81714986_81715115_81717248_81717289_81718181_81718225_81721226
transcript_137557.known	chr8	-	3452	9	FSM	ENSG00000104497.15	ENST00000396330.6	3452	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	23.1729233158011	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACAGTAGCTGTGTTGTT	-81841634	True	NA	-6	True	AATAAA	-14	NA	81842286	81799586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81840197_81840444_81842121
transcript_137562.known	chr8	-	3109	8	FSM	ENSG00000104497.15	ENST00000345957.9	3109	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	7.74069553379661	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGCTGTGTTGTTCATA	-81841533	True	NA	-2	True	AATAAA	-18	NA	81842185	81799582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_81801594_81802379_81802500_81803091_81803229_81815324_81815395_81823791_81823941_81829429_81829517_81839611_81840083_81842121
transcript_137563.known	chr8	+	1521	2	FSM	ENSG00000253898.1	ENST00000522365.1	1521	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAAGTAATTTTTCTG	NA	False	NA	NA	False	AATAAA	-19	NA	83403757	83408900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_83404070_83407691
transcript_137566.known	chr8	+	3726	19	FSM	ENSG00000133739.16	ENST00000360375.8	3726	19	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	22.1203916871981	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTCTGTTCCTGAAGAG	85105609	True	NA	7	True	ATTAAA	-24	NA	85107237	85146080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85107400_85109594_85109801_85110114_85110181_85112931_85113100_85115099_85115276_85115374_85115585_85123412_85123607_85124791_85124940_85126688_85126838_85129174_85129380_85129918_85130059_85131759_85131962_85134846_85135033_85135788_85135964_85137463_85137628_85138034_85138244_85138337_85138476_85141381_85141518_85145388
transcript_137584.known	chr8	-	887	4	FSM	ENSG00000176731.12	ENST00000619594.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_3	407.259404093045	3406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATCAGAGCCCTTTGTTT	-85201955	True	NA	NA	False	ATTAAA	-17	NA	85220374	85214047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85220305
transcript_137585.known	chr8	-	586	5	FSM	ENSG00000176731.12	ENST00000612977.4	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_4	374.532625414663	14425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAATGTACAGGCAT	-85201965	True	NA	0	True	AATAAA	-33	NA	85220384	85214486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219364_85220305
transcript_137586.known	chr8	-	475	5	FSM	ENSG00000176731.12	ENST00000612809.4	475	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	615.085563153615	4125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-85201956	True	NA	-15	True	AATAAA	-18	NA	85220375	85214501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219322_85219364_85220305
transcript_137587.known	chr8	-	491	4	FSM	ENSG00000176731.12	ENST00000545322.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	331.078037125187	3346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTAAAAATCTTG	-85202002	True	NA	-15	True	AATAAA	-18	NA	85220421	85214501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85217385_85217503_85219235_85219364_85220305
transcript_137588.known	chr8	-	483	5	FSM	ENSG00000176731.12	ENST00000615697.4	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	554.178220430937	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGATGCATCTAATTCT	-85201934	True	NA	-69	True	AATATA	-1	NA	85220353	85214555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85214632_85214920_85215038_85217385_85217503_85219235_85219361_85220305
transcript_137589.known	chr8	+	700	4	FSM	ENSG00000185015.8	ENST00000522631.1	700	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.78423336480244	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTCTGTGACATAGGAGG	85220912	False	NA	NA	False	AATACA	-1	NA	85220926	85230336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85221126_85224954_85225296_85230084_85230201_85230292
transcript_137593.nic	chr8	+	853	2	ISM	ENSG00000185015.8	ENST00000522631.1	700	4	-420	5148	-80	-5148	5prime_fragment	FALSE	canonical	3	11	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTCTGCCTTTAAA	85220194	True	NA	NA	False	AATAAA	-15	NA	85220506	85225188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_85221126_85224954
transcript_137594.known	chr8	+	1721	7	FSM	ENSG00000164879.7	ENST00000285381.3	1721	7	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_3	4.88762609953839	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGAGTGTTGTGTTTTTT	85438708	True	NA	6	True	AATAAA	-16	NA	85438858	85449040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85438944_85439711_85439910_85442072_85442192_85444033_85444127_85445155_85445219_85446141_85446298_85448033
transcript_137595.known	chr8	+	1562	7	FSM	ENSG00000104267.10	ENST00000285379.10	1562	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	10.1816828995342	383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGTTATTTATTTATT	85463069	True	NA	17	True	AATAAA	-44	NA	85464006	85481493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_85464116_85465271_85465470_85473692_85473812_85474323_85474417_85475797_85475861_85477119_85477276_85480669
transcript_137596.known	chr8	-	2042	3	FSM	ENSG00000253549.6	ENST00000521761.6	2042	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTATACTGATTTGCTT	NA	False	NA	NA	False	AATAAA	-21	NA	85464915	85440595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85442238_85462735_85462802_85464581
transcript_137598.nic	chr8	-	738	3	NIC	ENSG00000253549.6	novel	796	3	NA	NA	41	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGATTGCTTTTTT	NA	False	NA	2	True	AATAAA	-36	NA	85464874	85456484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_85456864_85462735_85462802_85464581
transcript_137599.known	chr8	-	796	3	FSM	ENSG00000253549.6	ENST00000524052.2	796	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGTGATTGCTTTTTT	-85463265	False	NA	2	True	AATAAA	-36	NA	85463282	85456484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_85456864_85462735_85462802_85462931
transcript_137616.nic	chr8	-	1169	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	86.9316462003977	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	-86508705	False	NA	-10	True	AATAAA	-19	NA	86508803	86472348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_86472480_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_137617.known	chr8	-	950	10	FSM	ENSG00000176623.12	ENST00000523911.5	950	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	101.721842950928	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATTTTGACTGTGACCTG	-86514240	True	NA	-14	True	AATAAA	-15	NA	86514338	86472352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86472480_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86514241
transcript_137621.nic	chr8	-	1208	10	NIC	ENSG00000176623.12	novel	2970	10	NA	NA	-117	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_1	63.5032807551442	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	-86508705	False	NA	-10	True	AATAAA	-19	NA	86508803	86472348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_86472480_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_137626.known	chr8	-	2970	10	FSM	ENSG00000176623.12	ENST00000406452.8	2970	10	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	30.4959013639538	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGACTGTGACCTGTTAT	-86504937	True	NA	-10	True	AATAAA	-19	NA	86508686	86472348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_137646.known	chr8	-	1164	9	FSM	ENSG00000176623.12	ENST00000519966.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	96.8336201946411	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGGGAGATCAAGCAAAG	-86504932	True	NA	72	True	NA	NA	NA	86508681	86474020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86474359_86474819_86474915_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_137647.known	chr8	-	1106	9	FSM	ENSG00000176623.12	ENST00000430676.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	77.4216337660218	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTCCATGGCTCAGGCA	-86504926	True	NA	-19	True	AATAAA	-26	NA	86508675	86474111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86474359_86474819_86474954_86477293_86477325_86478922_86479011_86480276_86480333_86486483_86486644_86488551_86488640_86506994_86507113_86508491
transcript_13765.known	chr1	+	944	3	FSM	ENSG00000058673.17	ENST00000466470.5	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	22	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTAAACACTCCCTGAT	203787292	True	NA	NA	False	NA	NA	NA	203795653	203802173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203795795_203796292_203796497_203801574
transcript_137662.known	chr8	-	728	8	FSM	ENSG00000176623.12	ENST00000519789.5	728	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	91.1918811280559	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACTGTGACCTGTTATG	-86506979	False	3749	-9	True	AATAAA	-20	NA	86507077	86472347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_86472480_86477293_86477325_86478922_86479011_86480276_86480333_86484871_86484962_86486483_86486644_86488551_86488640_86506994
transcript_137664.known	chr8	+	4857	17	FSM	ENSG00000085719.13	ENST00000517490.6	4857	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	28.1790452952189	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGACTTCATATTTTACT	86509981	True	NA	15	True	AATAAA	-20	NA	86514434	86561498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594_86546682_86547710_86547771_86548300_86548435_86551045_86551101_86551182_86551235_86554850_86554985_86556101_86556339_86558287
transcript_137670.nic	chr8	+	944	10	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-11	14858	-11	1307	5prime_fragment	FALSE	canonical	3	187	junction_2	26.0061721069119	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACAAGAATTCAGGTGTT	86509970	True	NA	NA	False	CATAAA	-27	NA	86514423	86546640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739_86544839_86546594
transcript_137672.nic	chr8	+	868	9	ISM	ENSG00000085719.13	ENST00000517490.6	4857	17	-11	16690	-11	0	5prime_fragment	FALSE	canonical	3	187	junction_2	27.4246125770265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGAAAGAAGCCTCCAG	86509970	True	NA	NA	False	NA	NA	NA	86514423	86544808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_86514542_86515461_86515500_86528535_86528678_86528944_86529125_86531154_86531230_86532508_86532581_86537562_86537647_86540244_86540335_86544739
transcript_137682.nnic	chr8	+	502	3	NNC	ENSG00000253553.8	novel	1715	5	NA	NA	-15	92043	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTCTCACCCCAACTT	88327259	True	NA	NA	False	AATAAA	-32	NA	88327768	88421510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_88327899_88328928_88329053_88421262
transcript_137684.known	chr8	+	594	2	FSM	ENSG00000253553.8	ENST00000520849.5	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAACGTTCCAGCAAA	88327334	True	NA	NA	False	AGTAAA	-12	NA	88327843	88329467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_88327899_88328928
transcript_137690.known	chr8	-	4227	5	FSM	ENSG00000251136.10	ENST00000653574.1	4227	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.17960354715414	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATGATATAACTTTAACT	NA	False	NA	NA	False	ACTAAA	-12	NA	89757812	89718519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89721375_89722014_89722157_89724628_89724967_89725517_89725642_89757044
transcript_137698.nnic	chr8	-	958	3	NIC	ENSG00000251136.10	novel	810	4	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCATTTATTCTTA	-89757432	True	NA	NA	False	AATACA	-22	NA	89757676	89616928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_89617157_89629153_89629252_89757044
transcript_137699.known	chr8	-	1750	3	FSM	ENSG00000251136.10	ENST00000655144.2	1999	3	0	249	0	-56	multi-exon	FALSE	canonical	3	12	junction_1	2	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAATCCTCCAAAATTTT	-89757678	True	NA	NA	False	NA	NA	NA	89757722	89724018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89724967_89725517_89725642_89757044
transcript_137700.known	chr8	+	2516	11	FSM	ENSG00000104312.8	ENST00000220751.5	2516	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	35.3723055510946	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCTGTCCCTTTCTTCC	89756109	True	NA	10	True	AATAAA	-20	NA	89757815	89791064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_89758234_89762828_89762983_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_137705.known	chr8	+	1916	10	FSM	ENSG00000104312.8	ENST00000522965.1	1916	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	49.3783578323765	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCAATTTTTATGTCTCT	89756099	True	NA	19	True	AGTAAA	-21	NA	89757805	89790608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_89758234_89765340_89765497_89769771_89769930_89771740_89771791_89772666_89772829_89780074_89780161_89784049_89784140_89786592_89786687_89789320_89789483_89790078
transcript_137710.known	chr8	+	4209	6	FSM	ENSG00000164823.11	ENST00000297438.6	4209	6	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	41.2485151247896	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATGCAAGTTCCACTAAA	NA	False	NA	NA	False	AATAAA	-14	NA	89901858	89927868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079_89921172_89924502
transcript_137714.nic	chr8	+	844	5	ISM	ENSG00000164823.11	ENST00000297438.6	4209	6	147	6549	147	0	5prime_fragment	FALSE	canonical	3	40	junction_1	46.0943326234365	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTAGTTTTCATTTAGA	89901482	True	NA	NA	False	AATAAA	-28	NA	89902005	89921319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_89902126_89909566_89909722_89914076_89914214_89914554_89914747_89921079
transcript_137717.known	chr8	-	4907	19	FSM	ENSG00000104320.14	ENST00000396252.6	4907	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	71.7438000074304	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATACTGTATTTAAGTC	NA	False	NA	-11	True	AATAAA	-14	NA	90003228	89933335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89981952_89982003_89982721_89982856_89984524_89984734_89984916_89984974_90003111
transcript_137723.known	chr8	-	4622	16	FSM	ENSG00000104320.14	ENST00000265433.8	4622	16	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_14	29.9053321146729	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTGTATTTAAGTCAAAAG	-89981999	True	NA	-6	True	AATAAA	-19	NA	89984667	89933330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_89935613_89937025_89937076_89943252_89943367_89946139_89946296_89947823_89947893_89953243_89953692_89955282_89955556_89958724_89958855_89964409_89964508_89970363_89970558_89971172_89971291_89978219_89978324_89980733_89980894_89981374_89981524_89982721_89982856_89984524
transcript_137730.known	chr8	+	1766	12	FSM	ENSG00000104325.7	ENST00000522161.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	174.084856291645	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATTCATTGAATATGTA	89996893	True	NA	NA	False	AATAAA	-13	NA	90001476	90051999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90005447_90005846_90006035_90006278_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_137744.known	chr8	+	2760	10	FSM	ENSG00000104325.7	ENST00000220764.7	2760	10	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	33.4490583749803	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCAACCTTTTTT	89996893	True	NA	NA	False	AATAAA	-16	NA	90001476	90053633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_137749.known	chr8	+	897	9	FSM	ENSG00000104325.7	ENST00000517597.5	897	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.022112443709	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAGTCTAATAAATTCTT	89996892	True	NA	NA	False	AATAGA	-34	NA	90001475	90051972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90036840_90036941_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_137753.known	chr8	+	816	8	FSM	ENSG00000104325.7	ENST00000519328.5	816	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	171.652829506394	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTACAGAAAAGGGAATAGAA	89996821	True	NA	NA	False	NA	NA	NA	90001404	90051920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90018908_90018967_90019085_90019173_90020908_90021057_90042727_90042801_90044848_90044996_90051676_90051740_90051837
transcript_137757.known	chr8	+	762	6	FSM	ENSG00000104325.7	ENST00000519007.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	155.05147532352	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACCAGCAGCCTTGTGA	89996893	True	NA	NA	False	NA	NA	NA	90001476	90029464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90001562_90017123_90017327_90018908_90018967_90019085_90019173_90020908_90021057_90029283
transcript_137765.nnic	chr8	-	2343	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	114.205122477059	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082869	False	NA	-1	True	AATAAA	-22	NA	90082879	90058607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_137767.nnic	chr8	-	1532	11	NNC	ENSG00000104327.7	novel	2533	11	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_10	114.205122477059	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACTCTGTGTAATCTCT	-90082869	False	NA	-55	True	NA	NA	NA	90082879	90059418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082808
transcript_137774.known	chr8	-	2533	11	FSM	ENSG00000104327.7	ENST00000265431.7	2533	11	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_10	41.947586342959	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGTATTTGTTTTTTC	-90082869	False	NA	-1	True	AATAAA	-22	NA	90082879	90058607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90060287_90060628_90060701_90063099_90063154_90063280_90063321_90063405_90063462_90065897_90065976_90068997_90069055_90069153_90069238_90078372_90078448_90082025_90082103_90082618
transcript_137775.nnic	chr8	+	574	2	NNC	ENSG00000253394.7	novel	1053	5	NA	NA	460622	5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGTGCATTTTGTCC	90682182	True	NA	3	True	AATAAA	-20	NA	90682216	90687868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_90682283_90687360
transcript_137777.known	chr8	-	4992	3	FSM	ENSG00000180694.14	ENST00000458549.7	4992	3	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	6.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTTCTCGCTTTTCTTT	-90645271	True	NA	-6	True	AATAAA	-14	NA	90646083	90621999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90625863_90631551_90631708_90645110
transcript_137779.known	chr8	-	1174	2	FSM	ENSG00000180694.14	ENST00000422900.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATTTACACCTATTCACAA	-90645452	False	NA	NA	False	NA	NA	NA	90645512	90625090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90625863_90645110
transcript_13778.known	chr1	+	478	4	FSM	ENSG00000182004.13	ENST00000470492.5	478	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2239.64347361112	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAAATTTACATTGCTTC	203838077	True	NA	19	True	AATAAA	-21	NA	203861608	203870077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861744_203863662_203863726_203865040_203865120_203869876
transcript_137780.known	chr8	+	5049	13	FSM	ENSG00000123119.12	ENST00000417640.7	5049	13	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	5.76085931090146	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGTCTACAAATGAAAAA	90791608	True	NA	NA	False	AATAAA	-16	NA	90791774	90959393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90791986_90801690_90801716_90824716_90824826_90872127_90872154_90881032_90881131_90917491_90917629_90925534_90925657_90928222_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_137781.nic	chr8	+	929	6	ISM	ENSG00000123119.12	ENST00000417640.7	5049	13	136322	3518	-12095	57	3prime_fragment	FALSE	canonical	3	24	junction_5	4.53431361950185	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCATAGGGCAGATTT	NA	False	NA	NA	False	AATAAA	-19	NA	90928096	90955875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_90928300_90934303_90934358_90940785_90940899_90949806_90949885_90951112_90951205_90955486
transcript_137783.known	chr8	+	656	3	FSM	ENSG00000123119.12	ENST00000522729.5	656	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTTCTGCCATTAATTTA	90791574	True	NA	NA	False	AATAAA	-2	NA	90791740	90825102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_90791986_90801690_90801716_90824716
transcript_137786.known	chr8	-	1041	6	FSM	ENSG00000253250.3	ENST00000517562.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	23.5762592452662	378	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTATTTCTTTTCAGATA	-90983499	True	NA	-5	True	AATAAA	-20	NA	90985238	90958470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90959031_90960741_90960849_90971065_90971142_90978578_90978653_90980362_90980462_90985113
transcript_137792.known	chr8	-	838	7	FSM	ENSG00000155099.8	ENST00000520014.1	838	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	119.366964534674	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAAGAGTCAGTTATC	-91037204	True	NA	NA	False	NA	NA	NA	91040835	90995716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90995821_90996653_90996745_91008742_91008796_91018389_91018514_91020156_91020264_91021255_91021423_91040643
transcript_137799.known	chr8	-	867	6	FSM	ENSG00000155099.8	ENST00000518359.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.376741939629	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGATTCCATTCTGGTTT	-91037180	True	NA	NA	False	TTTAAA	-12	NA	91040811	90995592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_90995821_90996653_90996745_91018389_91018514_91020156_91020264_91021255_91021405_91040643
transcript_137802.known	chr8	+	3148	7	FSM	ENSG00000155100.11	ENST00000404789.8	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	12.2701082128706	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTATTTGCTTGAATTGT	91063545	True	NA	NA	False	AATAAA	-21	NA	91070343	91087093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_137805.known	chr8	-	2171	2	FSM	ENSG00000253738.3	ENST00000524003.1	2171	2	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	0	568	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGGACTATGACTTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	91070189	91067910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91069823_91069930
transcript_137806.known	chr8	+	1631	8	FSM	ENSG00000155100.11	ENST00000522894.5	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	91.5797856672374	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGCTTGCTTTAATAATT	91063526	True	NA	NA	False	AATATA	-24	NA	91070324	91085417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_91070467_91071137_91071290_91073830_91073912_91076591_91076732_91078355_91078669_91080668_91080731_91084007_91084115_91084783
transcript_137808.nnic	chr8	+	576	3	NNC	ENSG00000147606.9	novel	5094	18	NA	NA	-12127	-99232	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	1	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCATTATAACGTTCCC	91197065	True	NA	NA	False	AATAAA	-12	NA	91197366	91219127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_91197525_91200612_91200793_91218889
transcript_137809.nnic	chr8	+	706	3	NNC	ENSG00000147606.9	novel	5094	18	NA	NA	-12127	-99102	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_2	1	840	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTTTTTCCTGCTGTTT	91197065	True	NA	22	True	AATAAA	-19	NA	91197366	91219257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_91197525_91200612_91200793_91218889
transcript_137817.nnic	chr8	-	850	3	NNC	ENSG00000253901.1	novel	564	4	NA	NA	37519	-76965	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTACATTCATATGA	-91869894	True	NA	2	True	AATAAA	-17	NA	91869934	91641944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_91642503_91773069_91773200_91869772
transcript_137818.nnic	chr8	-	835	3	NNC	ENSG00000253901.1	novel	564	4	NA	NA	37449	-76965	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGTACATTCATATGA	-91869964	False	NA	2	True	AATAAA	-17	NA	91870004	91641944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_91642503_91773069_91773200_91869857
transcript_137820.known	chr8	-	7483	12	FSM	ENSG00000079102.16	ENST00000614812.4	7483	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	9.62434928572076	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGGTCAGTCTATTCTC	-92095240	True	NA	0	True	AATAAA	-25	NA	92095654	91954966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92075964_92076138_92095346
transcript_137821.known	chr8	-	2370	11	FSM	ENSG00000079102.16	ENST00000360348.6	2370	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	9.00055553840984	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAAGGGCATGAGCATT	-92095204	False	NA	NA	False	AAAAAG	-8	NA	92095215	91959786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095027
transcript_137822.known	chr8	-	2103	11	FSM	ENSG00000079102.16	ENST00000520724.5	2103	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	9.78774744259372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTATTTCAGTACTTCAG	-92095600	False	NA	NA	False	NA	NA	NA	92095611	91960130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_91960518_91970657_91970849_91975904_91975974_91986123_91986326_91986886_91986973_91991638_91991890_92005115_92005298_92011001_92011092_92014578_92014821_92017225_92017364_92095346
transcript_137825.known	chr8	-	2061	4	FSM	ENSG00000079102.16	ENST00000523290.5	2061	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	12.0830459735946	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCAAATACCACTGGTTT	-92095251	False	NA	NA	False	NA	NA	NA	92095262	92009645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92011092_92014578_92014821_92017225_92017364_92095027
transcript_137831.known	chr8	-	348	1	FSM	ENSG00000233778.3	ENST00000465478.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	92144435	92144087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92144100_92144400
transcript_137833.known	chr8	-	1596	6	FSM	ENSG00000205133.12	ENST00000378861.9	1596	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	47.3387790294596	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTCTCTTGAGATTT	-92964257	True	NA	NA	False	TATAAA	-5	NA	92966098	92885713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_137834.known	chr8	-	1882	6	FSM	ENSG00000205133.12	ENST00000517858.5	1882	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	45.6403330399768	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTTTCCTGCTAGCCAA	-92964246	True	NA	-14	True	AATAAA	-13	NA	92966087	92885348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92921502_92921661_92954405_92954565_92966006
transcript_137836.known	chr8	-	3563	5	FSM	ENSG00000205133.12	ENST00000518748.5	3563	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	30.8706980808663	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGATGCCTTTTAGTCCTC	-92964303	True	NA	-4	True	AATAAA	-18	NA	92966144	92883634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_137837.known	chr8	-	1829	5	FSM	ENSG00000205133.12	ENST00000520430.5	1829	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	49.8767230278815	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCAAGAGAAGAAATCCTT	-92964270	True	NA	0	True	AATAAA	-27	NA	92966111	92885334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92921502_92921661_92966006
transcript_137838.known	chr8	-	3667	5	FSM	ENSG00000205133.12	ENST00000521988.6	3667	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	20.1912728672563	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTCGGCATTTACCATT	-92964303	True	NA	-2	True	AATAAA	-22	NA	92966144	92883533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_137840.nic	chr8	-	1812	5	NIC	ENSG00000205133.12	novel	1882	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	40.2833712591188	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAATATCTAAGG	-92964305	True	NA	15	True	AATAAA	-42	NA	92966146	92885319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_92886668_92891988_92892075_92916928_92917008_92954405_92954565_92966006
transcript_137841.known	chr8	-	598	5	FSM	ENSG00000205133.12	ENST00000519069.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	38.8780143525875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTCTTTCTGCTAATAT	-92964303	True	NA	NA	False	NA	NA	NA	92966144	92886533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917011_92921502_92921661_92966006
transcript_137842.known	chr8	-	865	5	FSM	ENSG00000205133.12	ENST00000524037.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	37.0295490115664	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCTCAAATCACATTCAG	-92964268	True	NA	NA	False	NA	NA	NA	92966109	92886232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917011_92954405_92954565_92966006
transcript_137853.known	chr8	-	3510	4	FSM	ENSG00000205133.12	ENST00000537541.1	3510	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	47.3168985552613	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTCGGCATTTACCATTTA	-92964303	True	NA	0	True	AATAAA	-24	NA	92966144	92883531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917011_92966006
transcript_137854.known	chr8	-	1753	4	FSM	ENSG00000205133.12	ENST00000517540.5	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.9688792038494	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTGTTTTCCTGCTAGCC	-92964288	True	NA	-16	True	AATAAA	-11	NA	92966129	92885350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92954405_92954565_92966006
transcript_137855.known	chr8	-	1630	4	FSM	ENSG00000205133.12	ENST00000523580.5	1630	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	40.8275506109403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGGAAATATCTAAGG	-92964282	True	NA	15	True	AATAAA	-42	NA	92966123	92885319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886668_92891988_92892075_92916928_92917008_92966006
transcript_137857.known	chr8	-	774	4	FSM	ENSG00000205133.12	ENST00000521617.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	44.4996878890428	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCTCAAATCACATTC	-92964273	True	NA	NA	False	NA	NA	NA	92966114	92886234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_92886736_92891988_92892075_92916928_92917008_92966006
transcript_13786.known	chr1	+	1560	5	FSM	ENSG00000182004.13	ENST00000414487.7	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	3867	junction_1	431.785247547899	30947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGTTTGAAATTAAT	203838067	True	NA	4	True	AATAAA	-22	NA	203861598	203871152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861714_203862195_203862223_203863662_203863726_203865040_203865120_203869876
transcript_137867.nic	chr8	-	1651	3	ISM	ENSG00000205133.12	ENST00000522925.5	559	5	-3	28996	-2	1308	5prime_fragment	FALSE	canonical	3	57	junction_1	24.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGTCGTGATGG	-92964305	True	NA	NA	False	AATACA	-14	NA	92966146	92915658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_92917011_92954405_92954565_92966006
transcript_137868.nic	chr8	-	361	2	ISM	ENSG00000205133.12	ENST00000519792.1	567	3	-31	1257	0	-1257	5prime_fragment	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAAGCATTATTGATTAC	-92964303	True	NA	NA	False	ATTAAA	-18	NA	92966144	92964733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_92964957_92966006
transcript_137869.known	chr8	+	1943	10	FSM	ENSG00000188343.14	ENST00000518116.5	1943	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.882203613641	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTGTCAATCATGGCT	93697221	True	NA	11	True	AATAAA	-19	NA	93700613	93729250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93724509_93724596_93726393_93726514_93728204
transcript_13787.known	chr1	+	532	5	FSM	ENSG00000182004.13	ENST00000475035.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	1954.97858044532	3100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATTGCTTCTTACTAT	203838071	True	NA	26	True	AATAAA	-28	NA	203861602	203870084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861744_203862181_203862223_203863662_203863726_203865040_203865120_203869876
transcript_137871.known	chr8	+	1014	9	NNC	ENSG00000188343.14	novel	4198	9	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	119.268604418766	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	93697200	True	NA	NA	False	ACTAAA	-41	NA	93700592	93728389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705006_93709759_93709768_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_137873.known	chr8	+	4198	9	FSM	ENSG00000188343.14	ENST00000518322.6	4198	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	111.400179533069	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCCATAGCAAGCAGGAT	93697157	True	NA	NA	False	NA	NA	NA	93700549	93731527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93718674_93718789_93726393_93726514_93728204
transcript_137879.known	chr8	+	914	8	FSM	ENSG00000188343.14	ENST00000423990.6	914	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	132.402755998198	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAAGTCCAACTGGAAAC	93697189	True	NA	NA	False	ACTAAA	-41	NA	93700581	93728389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908_93705011_93708010_93708017_93709770_93709876_93726393_93726514_93728204
transcript_13788.known	chr1	+	967	4	FSM	ENSG00000182004.13	ENST00000483099.5	967	4	0	0	0	0	multi-exon	FALSE	canonical	3	4258	junction_1	357.044348319178	1625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTACATTGCTTCTTAC	203838071	True	NA	23	True	AATAAA	-25	NA	203861602	203870081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203862223_203863662_203863726_203865040_203865120_203869876
transcript_13789.known	chr1	+	248	3	FSM	ENSG00000182004.13	ENST00000469451.1	248	3	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	2025.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGGATAGAAGTGGTCTT	203860407	True	NA	NA	False	AAGAAA	-9	NA	203861849	203865119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203861956_203863662_203863726_203865040
transcript_137893.known	chr8	+	1072	4	FSM	ENSG00000188343.14	ENST00000522324.5	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_3	15.6276108929747	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGACTTTCTTAAACTA	93697157	True	NA	NA	False	NA	NA	NA	93700549	93705552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93700674_93701223_93701459_93703619_93703689_93704908
transcript_137897.known	chr8	-	8530	4	FSM	ENSG00000183808.12	ENST00000520560.6	8530	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	36.5361312797194	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	-93735664	True	NA	-4	True	AATAAA	-19	NA	93741009	93728154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93736439_93737306_93737356_93740628_93740697_93740880
transcript_137898.known	chr8	-	8470	3	FSM	ENSG00000183808.12	ENST00000399300.7	8470	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	35	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACATTCTTGGTATATT	-93735672	True	NA	-4	True	AATAAA	-19	NA	93741017	93728154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93736439_93737306_93737356_93740880
transcript_1379.known	chr1	-	2061	4	FSM	ENSG00000116251.11	ENST00000234875.9	2061	4	0	0	0	0	multi-exon	FALSE	canonical	3	4433	junction_3	985.051718890378	126394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTTTGTTTTTTTTAA	-6124124	True	NA	-1	True	ATTAAA	-30	NA	6199595	6185019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199561
transcript_13790.known	chr1	+	355	3	FSM	ENSG00000182004.13	ENST00000367208.1	355	3	0	0	0	0	multi-exon	FALSE	canonical	3	4367	junction_1	348.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATACTATGGGATTGT	203863587	False	NA	-7	True	NA	NA	NA	203863624	203870051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_203863726_203865040_203865120_203869876
transcript_137901.nic	chr8	-	754	2	ISM	ENSG00000183808.12	ENST00000520560.6	8530	4	-67	11984	-59	-9506	5prime_fragment	FALSE	canonical	3	63	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGGTTGGTGTAGATTA	-93735731	True	NA	NA	False	TATAAA	-24	NA	93741076	93740138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_93740697_93740880
transcript_137902.known	chr8	-	736	1	FSM	ENSG00000271971.1	ENST00000607706.1	736	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGATGTTTCTTGCTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	93716113	93715377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93715400_93716100
transcript_137903.known	chr8	+	530	2	FSM	ENSG00000253848.1	ENST00000523945.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCGGAGAAGCACTGCTTT	93741176	True	NA	NA	False	AATAAA	-19	NA	93741192	93744534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93741460_93744271
transcript_137905.known	chr8	+	3296	29	FSM	ENSG00000164953.17	ENST00000323130.8	3296	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_28	16.5582999102676	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAGATTACTGATCTCAAT	93754081	True	NA	NA	False	AATAAA	-21	NA	93754914	93819234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371_93816516_93818989
transcript_137906.known	chr8	+	4134	29	FSM	ENSG00000164953.17	ENST00000684064.1	4134	29	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14.7720779078059	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGATGAAAATATATACTAAA	NA	False	NA	-16	True	TATAAA	-19	NA	93754843	93817637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93754910_93755019_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_137907.known	chr8	+	4678	28	FSM	ENSG00000164953.17	ENST00000453321.8	4678	28	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	10.6909445932666	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCGACTCCTTTGTTC	93754060	True	NA	83	True	CATAAA	-21	NA	93754893	93818121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93763841_93763942_93765405_93765476_93765571_93765647_93772588_93772652_93780592_93780748_93780873_93780983_93781657_93781745_93782394_93782461_93785221_93785379_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_13791.known	chr1	-	776	5	FSM	ENSG00000174567.8	ENST00000308302.4	776	5	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	8.38152730712011	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213553	True	NA	-3	True	ATTAAA	-20	NA	204213988	204198162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204198497_204199194_204199259_204201632_204201812_204202895_204202988_204213881
transcript_137910.known	chr8	+	2535	19	FSM	ENSG00000164953.17	ENST00000453906.6	2535	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.7384909426065	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCATGTTTTGTGTGC	93754060	True	NA	-43	True	NA	NA	NA	93754893	93816860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482_93758577_93786222_93786347_93787843_93787950_93791262_93791320_93793197_93793297_93795408_93795508_93795900_93795988_93797133_93797234_93797330_93797471_93799617_93799759_93803603_93803685_93804761_93804879_93808839_93808957_93809056_93809162_93809784_93809888_93815304_93815448_93816371
transcript_137912.nnic	chr8	+	723	4	NNC	ENSG00000164953.17	novel	1319	3	NA	NA	0	-4	intron_retention	FALSE	non_canonical	0	0	junction_3	29.6348143611905	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGTAAAATATCAT	93754031	True	NA	NA	False	NA	NA	NA	93754864	93759476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_93755138_93755777_93755867_93758482_93758717_93759349
transcript_137913.known	chr8	+	1319	3	FSM	ENSG00000164953.17	ENST00000475305.1	1319	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	6	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTAAAATATCATTGTT	93754072	True	NA	NA	False	NA	NA	NA	93754905	93759480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777_93755867_93758482
transcript_137916.known	chr8	+	1579	2	FSM	ENSG00000164953.17	ENST00000481620.1	1579	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCCTGTATAAATGTAT	93754078	True	NA	NA	False	AATAAA	-43	NA	93754911	93757130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93755138_93755777
transcript_137918.known	chr8	+	2554	3	FSM	ENSG00000164951.16	ENST00000520728.5	2554	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTATTTGTATTAA	93915141	True	NA	NA	False	AAGAAA	-9	NA	93916933	93924388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93917080_93917910_93917946_93922015
transcript_137919.known	chr8	+	4210	2	FSM	ENSG00000164951.16	ENST00000297598.5	4210	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTTGGTTTTTAA	93915130	True	NA	11	True	ATTAAA	-22	NA	93916922	93926068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_93917080_93922015
transcript_137920.known	chr8	-	949	1	FSM	ENSG00000264448.5	ENST00000607097.1	949	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCCTTTATAACTCCTG	-93916585	True	NA	NA	False	AATAAA	-19	NA	93916682	93915733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93915700_93916700
transcript_137921.known	chr8	-	354	1	FSM	ENSG00000240509.1	ENST00000466433.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	284	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAACTTTTTTGAGTA	NA	False	NA	NA	False	NA	NA	NA	93957691	93957337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_93957300_93957700
transcript_137922.known	chr8	-	2187	5	FSM	ENSG00000164949.8	ENST00000297596.3	2187	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	3.35410196624968	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-94261547	True	NA	NA	False	AATAAA	-23	NA	94262319	94249252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262089
transcript_137923.known	chr8	-	2103	5	FSM	ENSG00000164949.8	ENST00000396194.6	2103	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	4.49305018890286	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATTCTTGATTGATTTTC	-94261578	True	NA	NA	False	AATAAA	-23	NA	94262350	94249252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94250588_94252018_94252224_94253035_94253113_94260172_94260513_94262204
transcript_137928.known	chr8	-	3074	15	FSM	ENSG00000197275.14	ENST00000336148.10	3074	15	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_10	21.3875798403787	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTTAATAATTCCTTG	-94472004	True	NA	-1	True	AATAAA	-21	NA	94475115	94371959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94372388_94378179_94378381_94378567_94378635_94380144_94380407_94386983_94387160_94391608_94391900_94393742_94393883_94399413_94399622_94400237_94400464_94404076_94404240_94407438_94407721_94411120_94411316_94458267_94458437_94467404_94467556_94475000
transcript_13793.nnic	chr1	-	783	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-186	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	20.704266871026	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204214163	False	NA	-3	True	ATTAAA	-20	NA	204214174	204198162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_204198497_204199194_204199259_204202895_204202988_204213881
transcript_13794.nnic	chr1	-	845	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-133	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	19.1369334592098	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213686	True	NA	-3	True	ATTAAA	-20	NA	204214121	204198162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_204198497_204201632_204201812_204202895_204202988_204213881
transcript_137940.known	chr8	-	1879	4	FSM	ENSG00000197275.14	ENST00000297592.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	66.0454389038335	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCTCAATTCTTAAAGCATA	-94471951	True	NA	NA	False	AATAAA	-1	NA	94475062	94431159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94432657_94458267_94458437_94467404_94467556_94475000
transcript_137941.nic	chr8	-	1308	2	ISM	ENSG00000197275.14	ENST00000297592.5	1879	4	-99	35249	-46	-35249	5prime_fragment	FALSE	canonical	3	214	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATACTGGAAGCAGTCT	-94472050	True	NA	NA	False	NA	NA	NA	94475161	94466408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_94467556_94475000
transcript_137942.known	chr8	-	5391	2	FSM	ENSG00000265817.4	ENST00000481490.3	5391	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTTGTGTACTTTTTTT	-94436229	True	NA	-4	True	AATACA	-16	NA	94436944	94427715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94432657_94436494
transcript_137943.known	chr8	+	1789	2	FSM	ENSG00000253704.3	ENST00000523011.1	1789	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATTAGCCGGGCGAGG	94553658	True	NA	NA	False	ACTAAA	-10	NA	94553721	94569745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94553908_94568142
transcript_137944.known	chr8	+	953	3	FSM	ENSG00000253704.3	ENST00000659133.2	1127	3	57	117	4	3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTTAGAAAGTGTTTCTA	94553706	True	NA	NA	False	NA	NA	NA	94553769	94570531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94553908_94568142_94568536_94570109
transcript_137946.nnic	chr8	-	659	3	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-31	-9	multi-exon	FALSE	canonical	1	4	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCCTCAGAGGACATTT	-94639167	False	NA	-14	True	ATTAAA	-11	NA	94639498	94637293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94638036_94638108_94639359
transcript_137947.nnic	chr8	-	594	3	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-31	-74	multi-exon	FALSE	canonical	1	4	junction_1	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTATAAGGGAATTATTA	-94639167	False	NA	-19	True	AATAAA	-18	NA	94639498	94637358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94638036_94638108_94639359
transcript_137948.nnic	chr8	-	376	3	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-31	-292	multi-exon	FALSE	canonical	1	4	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTAGATTAGATAATAGT	-94639167	False	NA	NA	False	AATAAA	-13	NA	94639498	94637576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94638036_94638108_94639359
transcript_13795.nic	chr1	-	1660	4	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-186	0	intron_retention	FALSE	canonical	3	39	junction_2	8.65383665716478	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204214163	False	NA	-3	True	ATTAAA	-20	NA	204214174	204198162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_204199259_204201632_204201812_204202895_204202988_204213881
transcript_137950.nnic	chr8	-	622	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-55	1	multi-exon	FALSE	canonical	3	22	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGACATTTTGCTGCCACC	-94639191	False	NA	-4	True	ATTAAA	-21	NA	94639522	94637283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94639359
transcript_137951.nnic	chr8	-	544	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-55	-77	multi-exon	FALSE	canonical	3	22	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCTGTATAAGGGAATTA	-94639191	False	NA	-22	True	AATAAA	-15	NA	94639522	94637361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94639359
transcript_137952.nnic	chr8	-	340	2	Genic_Genomic	ENSG00000261437.1	novel	2183	1	NA	NA	-55	-281	multi-exon	FALSE	canonical	3	22	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAATAGTTTTATATCCAT	-94639191	False	NA	NA	False	AATAAA	-24	NA	94639522	94637565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr8_-_94637743_94639359
transcript_137953.known	chr8	-	2183	1	FSM	ENSG00000261437.1	ENST00000562760.1	2183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGACATTTTGCTGCCAC	-94639136	False	331	-5	True	ATTAAA	-20	NA	94639467	94637284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94637300_94639500
transcript_137955.known	chr8	+	3768	16	FSM	ENSG00000104413.18	ENST00000433389.8	3768	16	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_14	99.684702938816	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635827	True	NA	20	True	AATAAA	-21	NA	94641173	94707466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94692676_94692828_94696851_94696962_94705924
transcript_137957.known	chr8	+	3746	15	FSM	ENSG00000104413.18	ENST00000423620.6	3746	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	185.06711413618	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94641025	False	NA	20	True	AATAAA	-21	NA	94641073	94707466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94692676_94692828_94705924
transcript_137960.nic	chr8	+	3660	15	NIC	ENSG00000104413.18	novel	3768	16	NA	NA	-43	0	combination_of_known_junctions	FALSE	canonical	3	121	junction_13	129.697233775357	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635784	True	NA	20	True	AATAAA	-21	NA	94641130	94707466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674507_94678202_94678372_94696851_94696962_94705924
transcript_137961.known	chr8	+	3465	14	FSM	ENSG00000104413.18	ENST00000454170.7	3465	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	179.613523297883	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	94635857	True	NA	20	True	AATAAA	-21	NA	94641203	94707466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948_94668251_94671452_94671672_94674307_94674495_94678202_94678372_94705924
transcript_137968.nic	chr8	+	1684	10	ISM	ENSG00000104413.18	ENST00000646773.1	3274	14	-216	38893	-91	0	5prime_fragment	FALSE	canonical	3	494	junction_4	39.8723271096108	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGCATGAAAATAGTCT	94640972	False	NA	12	True	AATAAA	-22	NA	94640982	94668365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_94641451_94641955_94642085_94643302_94643417_94646167_94646283_94662271_94662371_94662500_94662556_94664696_94664808_94664926_94665060_94665153_94665197_94667948
transcript_137974.known	chr8	+	1813	1	FSM	ENSG00000104413.18	ENST00000523347.1	1813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCGATTTTTTTTTTG	NA	False	NA	20	True	AATAAA	-21	NA	94705653	94707466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94705700_94707500
transcript_137975.known	chr8	+	6197	19	FSM	ENSG00000156162.16	ENST00000414645.6	6197	19	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_7	21.8586932165627	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCTGAGTTTAGCATAAA	94717721	True	NA	10	True	AATAAA	-19	NA	94719899	94793836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94756035_94756160_94761699_94761835_94765182_94765315_94765710_94765810_94766611_94766686_94768394_94768554_94770451_94770572_94777665_94777787_94780358_94780416_94781083_94781167_94783669_94783803_94787893_94788053_94789745
transcript_13798.nnic	chr1	-	666	3	NIC	ENSG00000174567.8	novel	776	5	NA	NA	-133	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	23	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGGCTCAGAGTTGGCG	-204213686	True	NA	-3	True	ATTAAA	-20	NA	204214121	204198162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_204198497_204202895_204202988_204213881
transcript_137985.nic	chr8	+	1485	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	-11	-3	combination_of_known_junctions	FALSE	canonical	2	12	junction_6	41.479579982873	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATTCGTGTTCTTAAT	94717685	True	NA	125	True	ATTAAA	-18	NA	94719863	94745081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744342
transcript_137986.nic	chr8	+	1245	7	NIC	ENSG00000156162.16	novel	6197	19	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	36.7786169759912	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGCTGTCTCTTTATT	94717685	True	NA	27	True	AATACA	-17	NA	94719863	94744983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
transcript_137987.nic	chr8	+	1346	7	NIC	ENSG00000156162.16	novel	1124	6	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_6	36.7786169759912	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCGTGTTCTTAATGGT	94717685	True	NA	NA	False	ATTAAA	-21	NA	94719863	94745084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_94720015_94726330_94726442_94734629_94734755_94738368_94738460_94739412_94739535_94739644_94739791_94744484
transcript_13799.known	chr1	-	483	1	FSM	ENSG00000219133.2	ENST00000403842.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	204347258	204346775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204346800_204347300
transcript_138.known	SIRV1	-	744	3	FSM	SIRV1A	SIRV107	744	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	4939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGGCGCAAGGTACAT	NA	False	NA	NA	False	GATAAA	-18	NA	11643	10647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_10792_10882_11243_11403
transcript_1380.known	chr1	-	2279	3	FSM	ENSG00000116251.11	ENST00000480661.1	2279	3	0	0	0	0	multi-exon	FALSE	canonical	3	6384	junction_2	127	130421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATTGGAAATCATAGTC	-6124092	True	NA	NA	False	NA	NA	NA	6199563	6186574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651
transcript_13800.known	chr1	-	5259	2	FSM	ENSG00000158615.10	ENST00000367188.5	5259	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTTGGTTCAACTT	-204408731	True	NA	-15	True	AATAAA	-26	NA	204411817	204403380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_204406314_204409491
transcript_138009.known	chr8	+	946	9	FSM	ENSG00000156170.13	ENST00000454358.6	946	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	52.0923158920776	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTCATGGCATTGA	95023443	True	NA	-12	True	AAAACA	-6	NA	95025067	95057936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95025206_95031994_95032099_95035453_95035577_95041569_95041627_95045544_95045648_95046993_95047128_95048456_95048559_95052173_95052231_95057808
transcript_138013.known	chr8	+	4645	27	FSM	ENSG00000164941.14	ENST00000523731.6	4645	27	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	35.528157846981	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATACATGGGAAGAAATCAT	94815467	True	NA	NA	False	NA	NA	NA	94823286	94881746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94823562_94824892_94825068_94827262_94827404_94827721_94827794_94828974_94829027_94831991_94832175_94836523_94836632_94838462_94838619_94841490_94841592_94842346_94842489_94849461_94849533_94849915_94850092_94851552_94851687_94853804_94853916_94856776_94856979_94859510_94859633_94865505_94865691_94866157_94866192_94867139_94867197_94867275_94867338_94871883_94872003_94873373_94873478_94874551_94874603_94876073_94876148_94876220_94876286_94876445_94876490_94880117
transcript_138018.known	chr8	-	2674	12	FSM	ENSG00000175305.18	ENST00000308108.9	2674	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	7.73742648398299	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGCCATTGCTTGGAGA	-94894900	True	NA	NA	False	AATAAA	-32	NA	94895201	94880223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_94881746_94882131_94882290_94882780_94882893_94885066_94885202_94885462_94885559_94887926_94888074_94890414_94890551_94892817_94892970_94893890_94893945_94894022_94894120_94894207_94894248_94895176
transcript_138023.known	chr8	+	709	3	FSM	ENSG00000253878.5	ENST00000523905.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTGGGGTAGTTTT	94949397	False	NA	NA	False	AATAAA	-20	NA	94950036	94951396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_94950360_94950770_94950810_94951049
transcript_138024.known	chr8	+	2901	2	FSM	ENSG00000175895.4	ENST00000315367.4	2901	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTCTCTGTATATT	95133726	True	NA	15	True	AATAAA	-18	NA	95133784	95156685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_95134031_95154030
transcript_138026.known	chr8	-	3340	6	FSM	ENSG00000156172.6	ENST00000286688.6	3340	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	3.12409987036266	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAATCATTTTGATGTT	-95268752	True	NA	2	True	AGTAAA	-24	NA	95269201	95244912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_95247771_95252187_95252284_95259839_95259906_95260467_95260533_95263686_95263775_95269034
transcript_13803.known	chr1	+	2462	16	FSM	ENSG00000163531.17	ENST00000403080.5	2462	16	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	11.1586538415508	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCAAGACTGAGTTTGTG	204827626	True	NA	3	True	ATTAAA	-14	NA	204828694	204977139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_204828783_204920631_204920741_204944225_204944407_204950556_204950575_204952010_204952117_204954187_204954385_204954828_204954952_204957655_204957827_204968248_204968361_204968797_204968983_204970615_204970748_204973275_204973420_204974178_204974291_204974656_204974824_204975270_204975419_204976670
transcript_138040.known	chr8	-	1041	5	FSM	ENSG00000156467.10	ENST00000517603.5	1041	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3109.10158848179	5112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGAAATGATTGTTAT	-96196476	True	NA	17	True	TATAAA	-39	NA	96235543	96230476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96231133_96231773_96231941_96233155_96233228_96234422_96234537_96235511
transcript_138041.known	chr8	-	982	5	FSM	ENSG00000156467.10	ENST00000521036.5	982	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2880.65248685085	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGGGTATGCACCCCCTAG	-96196479	True	NA	-33	True	AATAAA	-4	NA	96235546	96230714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96231133_96231225_96231516_96231773_96231941_96233155_96233228_96235511
transcript_138042.known	chr8	-	515	4	FSM	ENSG00000156467.10	ENST00000517523.1	515	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	3063.24414088506	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGGAGTTTTTGAATTC	-96194152	False	39067	-45	True	AATAAA	-13	NA	96233219	96230938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96231133_96231531_96231622_96231773_96231941_96233155
transcript_138043.known	chr8	-	595	5	FSM	ENSG00000156467.10	ENST00000518406.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2880.65248685085	1767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTGGAGTTTTTGAA	-96196472	True	NA	-48	True	AATAAA	-10	NA	96235539	96230941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96231133_96231378_96231516_96231773_96231941_96233155_96233228_96235511
transcript_138054.known	chr8	-	1463	8	FSM	ENSG00000156469.9	ENST00000287025.4	1463	8	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_6	40.5276423681216	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGGAAACCATTTGATAC	-96258295	True	NA	14	True	AATAAA	-36	NA	96261610	96239401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96239686_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_138055.known	chr8	-	1529	9	FSM	ENSG00000156469.9	ENST00000523821.5	1529	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	199.264859859936	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAACCATTTGATACTGTA	-96258295	True	NA	18	True	AATAAA	-40	NA	96261610	96239397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_96239686_96239793_96239856_96243918_96244081_96245859_96245932_96246306_96246455_96250905_96251096_96256961_96257115_96258356_96258701_96261500
transcript_138056.known	chr8	+	4990	13	FSM	ENSG00000156471.13	ENST00000517309.6	4990	13	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_5	24.4364254523629	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	96255002	True	NA	NA	False	NA	NA	NA	96261901	96336995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96262220_96273298_96273391_96284108_96284154_96287021_96287147_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_13806.known	chr1	-	1332	1	FSM	ENSG00000174529.7	ENST00000367167.4	1332	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTATGGAGACCTTTTTC	-205084440	False	NA	-18	True	AATAAA	-15	NA	205084460	205083128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205083100_205084500
transcript_138062.known	chr8	+	2366	11	FSM	ENSG00000156471.13	ENST00000337004.8	2366	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_2	90.4933146702009	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGTCTGTAAAATGCTC	96255013	True	NA	25	True	AATAAA	-27	NA	96261912	96334552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96262220_96273298_96273391_96295097_96295257_96299693_96299846_96304039_96304182_96306443_96306557_96309556_96309623_96320245_96320346_96330212_96330282_96331025_96331096_96333456
transcript_138067.known	chr8	+	677	5	FSM	ENSG00000169439.12	ENST00000522911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	178.665189670512	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGCCATTCTGGCACT	96493992	False	NA	NA	False	AATAAA	-44	NA	96494007	96609643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96494044_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_138069.known	chr8	+	3307	5	FSM	ENSG00000169439.12	ENST00000302190.9	3307	5	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_2	34.0807863759039	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTTTCTTCAACTGTA	96488150	True	NA	27	True	AATAAA	-40	NA	96493812	96611790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96494332_96593479_96593592_96602394_96602529_96608334_96608471_96609384
transcript_138076.known	chr8	+	1932	8	FSM	ENSG00000104324.16	ENST00000220763.10	1932	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	2.6954231805876	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTGTTCATTTATG	96645133	True	NA	7	True	AATAAA	-19	NA	96645241	97143501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_96645403_96784863_96785331_96834972_96835181_96879797_96880006_96965934_96966047_97029402_97029495_97066008_97066211_97143019
transcript_138078.known	chr8	+	7662	12	FSM	ENSG00000147649.10	ENST00000336273.8	7662	12	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	25.8680695992838	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGCTCAAGAAATATAAC	97641428	True	NA	6	True	AATAAA	-23	NA	97644183	97730260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97644888_97661071_97661174_97686667_97686753_97687428_97687606_97689037_97689104_97690951_97691189_97699753_97699853_97706625_97706751_97713661_97713770_97719048_97719190_97722878_97723036_97724599
transcript_13808.known	chr1	-	4367	14	FSM	ENSG00000117222.14	ENST00000264515.11	4367	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	15.1302041269468	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-205118165	True	NA	NA	False	AATAAA	-21	NA	205121978	205086141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205088816_205094872_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_138088.known	chr8	+	432	1	FSM	ENSG00000243504.1	ENST00000491662.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTAATGGTGAAAACACT	NA	False	NA	NA	False	NA	NA	NA	97865053	97865485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97865100_97865500
transcript_138090.known	chr8	+	2031	8	FSM	ENSG00000132561.14	ENST00000523490.1	2031	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_6	12.162169516453	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGAAT	97868148	True	NA	NA	False	NA	NA	NA	97869112	98004286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_97869288_97888074_97888243_97930952_97931523_97941776_97941900_97961407_97961531_97978885_97979009_97994479_97994603_98003660
transcript_1381.known	chr1	-	508	4	FSM	ENSG00000116251.11	ENST00000465387.5	508	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3071.06597490549	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTACTTCCAGATTAACCA	-6199502	False	NA	NA	False	NA	NA	NA	6199553	6186722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6186817_6192929_6193055_6197651_6197757_6199369
transcript_13810.known	chr1	-	4290	14	FSM	ENSG00000117222.14	ENST00000367164.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	16.0984397788609	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTGTAGATGTTTATTTG	-205118202	True	NA	NA	False	AATAAA	-21	NA	205122015	205086141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205088816_205094986_205095065_205096681_205096912_205097325_205097396_205098988_205099107_205099740_205099813_205099910_205100065_205100151_205100272_205101599_205101710_205103856_205104020_205105027_205105169_205114788_205114962_205115857_205115884_205121854
transcript_138101.known	chr8	-	1129	5	FSM	ENSG00000156482.11	ENST00000521726.1	1129	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2896.32961694625	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAACCTTTTCACCTAC	NA	False	NA	-104	True	NA	NA	NA	98046469	98041806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045714
transcript_138110.known	chr8	-	498	5	FSM	ENSG00000156482.11	ENST00000287038.8	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_4	1136.98779676829	88705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980496	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346_98045400_98045507
transcript_138111.known	chr8	-	575	4	FSM	ENSG00000156482.11	ENST00000521291.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	6222	junction_1	334.068189978566	26236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980465	True	NA	-18	True	AATAAA	-19	NA	98045514	98041720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044942_98045089_98045346
transcript_138112.known	chr8	-	440	5	FSM	ENSG00000156482.11	ENST00000396070.6	440	5	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	2517.76716556555	4434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980495	True	NA	-18	True	AATAAA	-19	NA	98045544	98041720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042719_98044942_98045089_98045346_98045400_98045507
transcript_138113.known	chr8	-	274	4	FSM	ENSG00000156482.11	ENST00000523172.5	274	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	2579.92364228091	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCACCTACAAAATTT	-97980497	True	NA	-97	True	AGTAAA	-1	NA	98045546	98041799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98045346_98045400_98045507
transcript_138114.known	chr8	-	614	5	FSM	ENSG00000156482.11	ENST00000518850.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	2638.42750279404	1864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTATCTATTTCAGTAT	-97980496	True	NA	-18	True	AATAAA	-19	NA	98045545	98041720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98041851_98042644_98042776_98044826_98045089_98045346_98045400_98045507
transcript_138115.known	chr8	-	631	3	FSM	ENSG00000156482.11	ENST00000517489.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_2	1459.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGCTTTTTAAATCATAA	-97980501	True	NA	NA	False	NA	NA	NA	98045550	98042644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98042776_98044942_98045400_98045507
transcript_138116.known	chr8	-	573	2	FSM	ENSG00000156482.11	ENST00000521112.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	4116	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGTACCATGAACTCG	-97980499	True	NA	NA	False	AATATA	-19	NA	98045548	98044867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98045400_98045507
transcript_138117.known	chr8	+	1503	3	FSM	ENSG00000177459.11	ENST00000318528.8	1503	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTGAGGGTGACTTTCT	98064357	True	NA	7	True	AATAAA	-19	NA	98064567	98093609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98064728_98089075_98090030_98093220
transcript_138118.known	chr8	+	596	2	FSM	ENSG00000177459.11	ENST00000545282.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGAGGGTGACTTTCTT	98064311	True	NA	8	True	AATAAA	-20	NA	98064521	98093610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98064728_98093220
transcript_138126.known	chr8	-	761	5	FSM	ENSG00000132541.11	ENST00000521560.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	262.328991916639	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTCTGCTTTTACTTGAG	-98113637	True	NA	NA	False	TTTAAA	-39	NA	98117171	98102463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98117031
transcript_138128.known	chr8	-	884	6	FSM	ENSG00000132541.11	ENST00000522791.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	248.887926585441	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGTTATATAGATAATA	-98113625	True	NA	-64	True	ATTAAA	-38	NA	98117159	98102396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108714_98117031
transcript_138129.known	chr8	-	848	6	FSM	ENSG00000132541.11	ENST00000520507.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	254.843481376315	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGTGTTTAAATTTGAG	-98113576	True	NA	-106	True	AGTAAA	-2	NA	98117110	98102438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98102905_98104488_98104545_98105937_98106007_98106271_98106327_98108645_98108769_98117031
transcript_138130.known	chr8	+	4739	16	FSM	ENSG00000104356.11	ENST00000401707.7	4739	16	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	6.23395718803251	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAGTTGTGAATATTTA	98115973	True	NA	10	True	AATAAA	-17	NA	98117292	98159835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98117391_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_138134.known	chr8	+	3244	16	FSM	ENSG00000104356.11	ENST00000349693.3	3244	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.537169866694	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATGAAATGTTTACATCAT	98116520	False	NA	8	True	AATAAA	-20	NA	98117839	98158412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_98117866_98123335_98123480_98127594_98127763_98128364_98128541_98129977_98130227_98133948_98134037_98134471_98134660_98136481_98136739_98136860_98136955_98140077_98140190_98140768_98140889_98146567_98146684_98148814_98149007_98150484_98150640_98156049_98156413_98157616
transcript_138135.known	chr8	-	2833	11	FSM	ENSG00000104375.17	ENST00000419617.7	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	19.1373979422491	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCGTTTCTGTATCTTT	-98823778	True	NA	-2	True	AATAAA	-21	NA	98825688	98454632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_13814.known	chr1	-	7739	12	FSM	ENSG00000133059.17	ENST00000367161.7	7739	12	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_1	9.35613114928626	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTTTCTATCTGTTTGGT	-205211487	False	NA	-9	True	AATAAA	-17	NA	205211566	205142504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205147746_205150679_205150795_205157272_205157387_205159546_205159680_205160113_205160271_205161257_205161388_205162035_205162213_205162922_205163007_205163722_205163956_205169162_205169833_205187417_205187807_205211270
transcript_138140.known	chr8	-	2485	9	FSM	ENSG00000104375.17	ENST00000617590.1	2485	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	45.4745808117018	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTTTCTGTATCTTTGT	-98823761	True	NA	0	True	AATAAA	-23	NA	98825671	98454630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98456001_98526741_98526918_98547968_98548162_98579663_98579790_98596031_98596170_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_138146.nic	chr8	-	1422	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-40	124745	-40	292	5prime_fragment	FALSE	canonical	3	113	junction_1	15.0658418894111	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTTTGTGTCATATCT	-98823818	True	NA	-1	True	AATAAA	-17	NA	98825728	98579377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_138147.nic	chr8	-	1232	8	ISM	ENSG00000104375.17	ENST00000419617.7	2833	11	-40	124935	-40	102	5prime_fragment	FALSE	canonical	3	113	junction_1	15.0658418894111	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTAAGATATGTTTTTTC	-98823818	True	NA	NA	False	ATTAAA	-22	NA	98825728	98579567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_98579790_98596031_98596170_98706466_98706635_98707146_98707312_98749275_98749391_98767242_98767372_98774738_98774820_98825514
transcript_13815.known	chr1	-	3391	7	FSM	ENSG00000163545.11	ENST00000367157.6	3391	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	5.66911711723165	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCCTGCTGTTCTCTT	-205320043	True	NA	-6	True	ATTAAA	-20	NA	205321745	205302062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205304514_205305198_205305332_205306187_205306308_205308164_205308231_205308580_205308733_205311704_205311826_205321397
transcript_138154.known	chr8	+	14011	62	FSM	ENSG00000132549.20	ENST00000357162.7	14011	62	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_48	5.01258829216244	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGAATAAGTGTCATTT	99011082	True	NA	NA	False	AATAAA	-17	NA	99013273	99877580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176_99121446_99134631_99134728_99135014_99135138_99135595_99135734_99136664_99136753_99142973_99143166_99147840_99148011_99156548_99156744_99170038_99170164_99192875_99193058_99274197_99274333_99275080_99275255_99384207_99384318_99391556_99391705_99431536_99431665_99442400_99442636_99467413_99467635_99481598_99481803_99501686_99501859_99502835_99502951_99507136_99507204_99511103_99511513_99520898_99521011_99556449_99556654_99575657_99575785_99577489_99577634_99641810_99642499_99661353_99661492_99699524_99699933_99717170_99717374_99720344_99720553_99720862_99721048_99766773_99766971_99776774_99776957_99778681_99779032_99784314_99784477_99809374_99809531_99817539_99817804_99818450_99818535_99818712_99818889_99819411_99819583_99819920_99820123_99821293_99821483_99823831_99823979_99832368_99832653_99835196_99835325_99835538_99835739_99848775_99848895_99853450_99854257_99859303_99859481_99861775_99861947_99868288_99868466_99870784_99870888_99871447_99871698_99875417
transcript_138155.known	chr8	+	1626	8	FSM	ENSG00000132549.20	ENST00000441350.2	1626	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	4.65547735337152	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCCGTGAATTCTTTTA	99011082	True	NA	NA	False	ATTAAA	-21	NA	99013273	99121762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311_99096433_99102952_99103121_99111097_99111280_99115699_99115875_99121176
transcript_138156.nic	chr8	+	861	4	ISM	ENSG00000132549.20	ENST00000682806.1	2591	7	-10	18085	0	-18085	5prime_fragment	FALSE	canonical	3	19	junction_1	4.24264068711928	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGATCATTGTTTTAGT	99011074	True	NA	NA	False	NA	NA	NA	99013265	99096770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_99013348_99013759_99013936_99038422_99038567_99096311
transcript_13816.known	chr1	+	225	1	FSM	ENSG00000235363.1	ENST00000432323.1	225	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAAATAATGGCTGGTCA	205347326	True	NA	NA	False	NA	NA	NA	205351246	205351471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205351200_205351500
transcript_138160.known	chr8	-	380	2	FSM	ENSG00000253948.3	ENST00000521696.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	0	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTTTTAATTTCTAA	-99013033	False	NA	-5	True	AATAAA	-19	NA	99013044	98996762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_98996967_99012868
transcript_138172.known	chr8	-	513	4	FSM	ENSG00000164919.11	ENST00000524245.5	513	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	2245.89002402166	2372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGACAGTAAGTCTTT	-99893125	False	NA	-15	True	AATAAA	-13	NA	99893135	99878149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893012
transcript_138174.known	chr8	-	694	4	FSM	ENSG00000164919.11	ENST00000522940.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_3	2077.52967621537	2111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTGGACAGTAAGTCTT	-99858344	True	NA	-16	True	AATAAA	-12	NA	99893623	99878150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893318
transcript_138177.known	chr8	-	571	4	FSM	ENSG00000164919.11	ENST00000520271.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_3	2027.37800016562	10292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858343	True	NA	-14	True	AATAAA	-14	NA	99893622	99878148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892053_99893442
transcript_138178.known	chr8	-	429	4	FSM	ENSG00000164919.11	ENST00000517682.6	429	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_3	2114.56635953779	45932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGGACAGTAAGTCTTTC	-99858402	True	NA	-14	True	AATAAA	-14	NA	99893681	99878148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_99878266_99887489_99887619_99891907_99892048_99893638
transcript_138183.known	chr8	+	947	4	FSM	ENSG00000147669.11	ENST00000353107.8	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2053	junction_3	222.549370302911	13401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGTGTCACTGTGTCA	100134703	True	NA	15	True	AATAAA	-16	NA	100150635	100154003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_100150710_100151346_100151417_100151823_100151917_100153293
transcript_138201.known	chr8	+	1021	3	FSM	ENSG00000147669.11	ENST00000519765.1	1021	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1026.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTACTCACCTATTTTA	100134692	True	NA	45	True	NA	NA	NA	100150624	100153646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_100150710_100151333_100151917_100153293
transcript_138206.known	chr8	-	4186	10	FSM	ENSG00000034677.13	ENST00000341084.7	4186	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	12.4225998749988	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCCTTCTGGTGTGTA	-100309425	True	NA	-11	True	AATAAA	-17	NA	100309953	100257066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100259247_100259853_100259998_100261541_100261756_100264033_100264196_100264670_100264786_100268784_100268948_100269868_100270014_100274952_100275162_100287500_100288268_100309866
transcript_138210.nic	chr8	-	577	2	ISM	ENSG00000034677.13	ENST00000341084.7	4186	10	-210	30921	-15	-81	5prime_fragment	FALSE	canonical	3	36	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAATTTCAATAGGCTCC	NA	False	NA	NA	False	AAAAAG	-14	NA	100310163	100287987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_100288268_100309866
transcript_138211.known	chr8	-	2779	6	FSM	ENSG00000186106.11	ENST00000519597.5	2779	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	52.1167919196875	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-100557604	True	NA	-5	True	AATAAA	-21	NA	100559784	100520771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100532355_100532461_100533208_100533312_100559710
transcript_138213.known	chr8	-	2649	5	FSM	ENSG00000186106.11	ENST00000335659.7	2649	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	21.7987958383026	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACGATTTCTCTTTTTTTT	-100557579	True	NA	-5	True	AATAAA	-21	NA	100559759	100520771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100522772_100527844_100528004_100529522_100529861_100533208_100533312_100559710
transcript_138218.known	chr8	-	2401	16	FSM	ENSG00000070756.17	ENST00000519004.5	2401	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_15	2054.1988370706	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAAAGAATTTTCAGCA	-100666146	True	NA	-52	True	AGTAAA	-33	NA	100722087	100703098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390_100721453_100721728
transcript_13824.nic	chr1	-	772	4	NIC	ENSG00000186007.10	novel	741	4	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	2.62466929133727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	-205449952	False	846	NA	False	ATTAAA	-35	NA	205449966	205381380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_205381857_205384287_205384365_205420454_205420575_205449867
transcript_138249.known	chr8	-	2861	15	FSM	ENSG00000070756.17	ENST00000318607.10	2861	15	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_10	762.957350293807	6249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGATTTGCTTTTTTTCA	-100666147	True	NA	-6	True	AATAAA	-17	NA	100722088	100702915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705057_100705588_100705674_100706650_100706806_100706886_100706998_100709132_100709224_100709458_100709732_100712361_100712458_100712651_100712790_100713086_100713182_100715461_100715602_100717772_100717889_100718086_100718281_100721390
transcript_13825.nic	chr1	-	1301	4	Fusion	ENSG00000281406.2_ENSG00000186007.10	novel	741	4	NA	NA	202	0	multi-exon	FALSE	canonical	2	5	junction_2	10.6144555520604	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	-205456530	False	15	NA	False	ATTAAA	-35	NA	205456544	205381380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_205381857_205384287_205384365_205420454_205420575_205455916
transcript_138250.known	chr8	-	487	5	FSM	ENSG00000070756.17	ENST00000517990.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	2	250	junction_3	3685.04090886384	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGGAAAAAAAACATTGCAA	-100706127	False	114	2	True	AAGAAA	-31	NA	100706779	100703284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100703360_100704296_100704391_100704925_100705030_100705588_100705674_100706650
transcript_138251.known	chr8	+	348	1	FSM	ENSG00000212994.5	ENST00000475156.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	313	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	100895701	False	NA	NA	False	NA	NA	NA	100895770	100896118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_100895800_100896100
transcript_138260.known	chr8	-	812	6	FSM	ENSG00000164924.18	ENST00000395948.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	1764.54746606602	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATTTATGACAGGTTTATG	-100952980	False	7530	NA	False	NA	NA	NA	100952990	100920602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948733_100952849
transcript_138261.known	chr8	-	964	6	FSM	ENSG00000164924.18	ENST00000395951.7	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	1672.70958627013	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCCCACAAATAGTTTT	-100950547	False	1354	82	True	NA	NA	NA	100950557	100920629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100950405
transcript_138262.known	chr8	-	2974	6	FSM	ENSG00000164924.18	ENST00000395956.7	2974	6	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_5	1635.58031291649	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTTTTGTTGCTTGTTT	-100951439	False	NA	-13	True	NA	NA	NA	100951449	100918682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951234
transcript_138263.known	chr8	-	994	6	FSM	ENSG00000164924.18	ENST00000395953.6	994	6	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_5	1649.15408619086	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTACTTCTATTTGAAT	-100951584	False	NA	NA	False	NA	NA	NA	100951594	100920586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100951455
transcript_138264.known	chr8	-	2829	6	FSM	ENSG00000164924.18	ENST00000353245.7	2829	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_5	1651.15026572387	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACACTGTTTTGTTGCTTG	-100953331	False	NA	13	True	NA	NA	NA	100953341	100918685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100953268
transcript_138275.known	chr8	-	1399	5	FSM	ENSG00000164924.18	ENST00000521309.5	1399	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1930.72050993923	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAATAACTTGAGATGAT	-100902511	True	NA	54	True	NA	NA	NA	100952019	100919828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100951928
transcript_138279.known	chr8	-	876	4	FSM	ENSG00000164924.18	ENST00000517727.5	876	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	1957.89416352252	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAATGCAATTACTGAGA	-100950530	False	1354	NA	False	NA	NA	NA	100950540	100923986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100950405
transcript_138281.known	chr8	-	883	4	FSM	ENSG00000164924.18	ENST00000518736.5	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	1930.1140438384	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATGCAATTACTGAGAGA	-100951585	False	NA	NA	False	NA	NA	NA	100951595	100923984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100924299_100924915_100925040_100948595_100948901_100951455
transcript_138283.known	chr8	-	3007	6	FSM	ENSG00000164924.18	ENST00000457309.2	3007	6	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_5	1522.61677384692	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCTTGGGGTCTTTATTT	-100952983	False	7530	-36	True	AATAAA	-11	NA	100952993	100918578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100920753_100923954_100924051_100924134_100924299_100924915_100925040_100948595_100948901_100952849
transcript_138284.known	chr8	-	996	2	FSM	ENSG00000164924.18	ENST00000418997.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	3521	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAATCAATTCAGTCTG	-100952609	False	NA	NA	False	NA	NA	NA	100952619	100948595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_100948901_100951928
transcript_138285.known	chr8	-	732	6	FSM	ENSG00000120963.12	ENST00000521272.5	732	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	773.337028726803	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCAGCAAAAATAAAGGG	-101191749	True	NA	NA	False	NA	NA	NA	101205682	101199159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101204649_101204694_101205434
transcript_138287.known	chr8	-	959	5	FSM	ENSG00000120963.12	ENST00000519882.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	776.360418877727	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACAGGATAAATGGTT	-101205719	False	NA	NA	False	AATAAA	-19	NA	101205732	101198938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332_101202448_101205434
transcript_138291.known	chr8	-	2672	4	FSM	ENSG00000120963.12	ENST00000311212.9	2672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1612	junction_2	39.5979797464467	2547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAACTAGTCTAATTTCTT	-101191740	True	NA	NA	False	ATTAAA	-18	NA	101205673	101197051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101205434
transcript_138292.known	chr8	-	3502	4	FSM	ENSG00000120963.12	ENST00000520347.5	3502	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_3	685.808687284986	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCACAGGATAAATGGTTT	-101205274	False	NA	NA	False	AATAAA	-20	NA	101205287	101198937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101202332
transcript_138293.known	chr8	-	604	4	FSM	ENSG00000120963.12	ENST00000517844.5	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	773.392670137377	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGATAAATGGTTTTAGAA	-101204688	False	NA	NA	False	AATAAA	-25	NA	101204701	101198932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101199240_101199989_101200098_101201606_101201744_101204649
transcript_138294.nic	chr8	+	1348	6	ISM	ENSG00000083307.12	ENST00000646743.1	5232	16	-10	95786	-10	29870	5prime_fragment	FALSE	canonical	3	37	junction_3	4.42718872423573	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGAATGTCAGAGAGTTG	101489499	True	NA	NA	False	AATAAA	-23	NA	101492428	101573940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667
transcript_138298.nnic	chr8	+	691	2	NNC	ENSG00000083307.12	novel	1178	2	NA	NA	-38	12196	intron_retention	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAGGCTAAAAA	101489471	True	NA	NA	False	NA	NA	NA	101492400	101504985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_101492790_101504683
transcript_1383.nic	chr1	+	332	3	ISM	ENSG00000173673.8	ENST00000377898.4	710	4	-1	859	-1	-859	5prime_fragment	FALSE	canonical	3	195	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGACCCCGGGCTTTT	6238560	True	NA	NA	False	AATAAA	-18	NA	6244177	6244719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_6244242_6244350_6244447_6244547
transcript_13830.nnic	chr1	-	908	4	NNC	ENSG00000186007.10	novel	637	3	NA	NA	-1253	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	10.6770782520313	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTGTCTGGCGTTTTTCT	-205457193	False	NA	NA	False	ATTAAA	-35	NA	205457207	205381380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_205381857_205420454_205420575_205455916_205456036_205457014
transcript_138300.known	chr8	+	5232	16	FSM	ENSG00000083307.12	ENST00000646743.1	5232	16	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	5.60793089195016	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACAGTGTCTGGTGCTTTC	101489509	True	NA	27	True	AATAAA	-23	NA	101492438	101669726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_101492790_101543240_101543437_101552714_101552783_101558418_101558813_101570338_101570395_101573667_101573825_101577407_101577520_101599056_101599152_101619538_101619698_101631636_101631725_101632225_101632366_101636896_101636929_101644130_101644226_101649413_101649500_101664453_101664519_101666588
transcript_138302.known	chr8	-	469	2	FSM	ENSG00000104490.18	ENST00000524101.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTATGCAGGTTTACAA	-101790921	False	NA	NA	False	CATAAA	-2	NA	101790934	101788633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_101789030_101790861
transcript_138303.known	chr8	-	1613	9	FSM	ENSG00000048392.13	ENST00000522368.5	1613	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_8	187.933332594301	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATTAGGATGCAAAAATAAA	-102238747	False	NA	NA	False	TTTAAA	-44	NA	102238775	102207744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238558
transcript_138304.known	chr8	-	900	8	FSM	ENSG00000048392.13	ENST00000395912.6	900	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	199.365319482213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTCTCGTTTTAAAAC	-102238846	False	NA	-43	True	NA	NA	NA	102238874	102208132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102238826
transcript_138308.known	chr8	-	4774	9	FSM	ENSG00000048392.13	ENST00000251810.8	4774	9	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	34.6112337254828	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGTGTCTGCAGATAAA	-102235118	True	NA	-4	True	AATAAA	-18	NA	102238961	102204501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102208286_102212775_102212890_102214053_102214159_102218813_102218948_102224045_102224141_102224884_102225019_102225917_102226035_102232148_102232305_102238826
transcript_138311.known	chr8	+	2376	3	FSM	ENSG00000246263.4	ENST00000520820.3	2384	3	8	0	8	0	multi-exon	FALSE	canonical	1	5	junction_2	16	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCGCAATAAAAGTGGTTTT	102238877	True	NA	NA	False	NA	NA	NA	102239393	102253750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102239701_102244004_102244122_102251798
transcript_138314.nnic	chr8	+	592	3	Fusion	ENSG00000272037.1_ENSG00000246263.4	novel	2384	3	NA	NA	-16	0	multi-exon	FALSE	canonical	0	0	junction_2	18.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGACTTGGGGGGGAGC	NA	False	NA	NA	False	AATAAA	-22	NA	102239369	102257821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr8_+_102239701_102244004_102244122_102257677
transcript_138315.nnic	chr8	+	887	3	NNC	ENSG00000246263.4	novel	2384	3	NA	NA	-16	-2747	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCAATCACAGTGCCT	NA	False	NA	NA	False	ATTAAA	-17	NA	102239369	102250549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102239701_102244004_102244126_102250114
transcript_138317.known	chr8	+	592	2	FSM	ENSG00000253633.2	ENST00000523572.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTAAGCACATATTTATA	NA	False	NA	NA	False	TATAAA	-45	NA	102528754	102529801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102528856_102529310
transcript_13832.known	chr1	-	637	3	FSM	ENSG00000186007.10	ENST00000495594.2	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTGGCGTTTTTCTTTC	-205455940	False	40	NA	False	ATTAAA	-38	NA	205455954	205381377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205381857_205420454_205420575_205455916
transcript_138320.known	chr8	-	3659	4	FSM	ENSG00000155090.15	ENST00000395884.3	3659	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	80.2662236975595	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGGAATGGTCATTGCA	-102650617	False	NA	-7	True	AATAAA	-14	NA	102654375	102648785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102653469
transcript_138321.known	chr8	-	2915	4	FSM	ENSG00000155090.15	ENST00000285407.11	2915	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	15.5777619273972	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAATGGTCATTGCATT	-102651967	True	NA	-5	True	AATAAA	-16	NA	102655725	102648783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102650392_102651148_102652062_102652163_102652398_102655565
transcript_138324.nnic	chr8	+	390	2	FSM	ENSG00000283959.2	ENST00000689431.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAAATTTATTTCTCA	102656371	True	NA	NA	False	AATAAA	-26	NA	102656486	102666410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102656669_102666202
transcript_138325.nic	chr8	+	508	2	FSM	ENSG00000283959.2	ENST00000687500.1	763	2	246	9	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACAGAAATTTATTTCTCA	102656371	True	NA	NA	False	AATAAA	-26	NA	102656486	102666410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102656787_102666202
transcript_13833.known	chr1	-	6454	3	FSM	ENSG00000281406.2	ENST00000626538.2	6454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGCAGTAAATGGATT	-205456732	False	NA	NA	False	AATAAA	-16	NA	205456746	205434884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205441063_205455916_205456036_205456589
transcript_138332.nnic	chr8	+	1065	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.4599357943771	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	102929933	True	NA	11	True	ATTAAA	-20	NA	102930170	102977876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102937623_102937758_102941538_102941699_102941920_102942054_102977586
transcript_138334.nnic	chr8	+	1134	5	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-163	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	12.7279220613579	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	102929968	True	NA	11	True	ATTAAA	-20	NA	102930018	102977876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102937623_102937758_102941920_102942054_102967596_102967674_102977586
transcript_138339.nnic	chr8	+	887	5	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-192	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	11.8743420870379	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	102929976	True	NA	11	True	ATTAAA	-20	NA	102929989	102977876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930115_102930313_102930519_102937623_102937758_102941920_102942054_102977586
transcript_13834.known	chr1	+	2986	16	FSM	ENSG00000117266.16	ENST00000429964.7	2986	16	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	21.9048447203403	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCGAGCAGTCTCGTACA	205502026	True	NA	16	True	AATATA	-20	NA	205504668	205532790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_138344.known	chr8	+	756	4	FSM	ENSG00000253320.7	ENST00000517996.5	756	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.328828005938	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTAAAAGTATATGAAATC	102929944	True	NA	NA	False	NA	NA	NA	102930181	102977738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102930519_102937623_102937758_102941920_102942054_102977586
transcript_138348.nnic	chr8	+	749	4	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-192	1229	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	11.2644968324772	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGACT	102929976	True	NA	NA	False	AATACA	-25	NA	102929989	102938947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930115_102930313_102930519_102937623_102937758_102938662
transcript_13835.known	chr1	+	2143	16	FSM	ENSG00000117266.16	ENST00000506784.5	2143	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	32.7972898609355	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTAGTCCCCCTTTCTG	NA	False	NA	NA	False	NA	NA	NA	205504597	205531786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205504797_205523146_205523298_205523482_205523716_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774_205526838_205527793_205527918_205528047_205528169_205528998_205529097_205529323_205529430_205529520_205529564_205530258_205530350_205530627_205530706_205531343
transcript_138353.nnic	chr8	+	983	3	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-227	1229	at_least_one_novel_splicesite	TRUE	canonical	2	9	junction_2	10.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGACT	102929921	False	NA	NA	False	AATACA	-25	NA	102929954	102938947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102937623_102937758_102938662
transcript_138357.nnic	chr8	+	509	3	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-192	-6505	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTATTGGTTTTGATTC	102929976	True	NA	NA	False	AATAAA	-21	NA	102929989	102931213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930115_102930313_102930519_102931034
transcript_138362.nnic	chr8	+	821	3	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	102930093	False	NA	11	True	ATTAAA	-20	NA	102930120	102977876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102941920_102942054_102977586
transcript_138364.known	chr8	+	504	2	FSM	ENSG00000253320.7	ENST00000524007.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAAGCGACCTTCCTGTG	102863881	True	NA	NA	False	AATAAA	-18	NA	102864336	102865319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102864624_102865102
transcript_138365.nnic	chr8	+	997	2	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-192	-6509	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGATCCTATTGGTTTTG	102929976	True	NA	NA	False	AATAAA	-17	NA	102929989	102931209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102930741
transcript_138367.nnic	chr8	+	641	2	NIC	ENSG00000253320.7	novel	756	4	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	102929930	True	NA	11	True	ATTAAA	-20	NA	102930167	102977876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_102930519_102977586
transcript_138368.nnic	chr8	+	520	2	NNC	ENSG00000253320.7	novel	756	4	NA	NA	-4	-6505	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTATTGGTTTTGATTC	102929940	True	NA	NA	False	AATAAA	-21	NA	102930177	102931213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_102930519_102931034
transcript_138369.known	chr8	+	499	3	FSM	ENSG00000253320.7	ENST00000519648.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATGTATCAATATTTAAT	NA	False	NA	11	True	ATTAAA	-20	NA	102941622	102977876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_102941699_102941920_102942054_102977586
transcript_138370.known	chr8	-	2857	13	FSM	ENSG00000155096.15	ENST00000347770.8	2857	13	0	0	0	0	multi-exon	FALSE	canonical	1	457	junction_10	442.215280340545	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAAGTTCAGATTCATTA	-102864160	False	NA	-4	True	AGTAAA	-17	NA	102864193	102827822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102849998_102850145_102858012_102858151_102863806
transcript_138379.known	chr8	-	4196	12	FSM	ENSG00000155096.15	ENST00000337198.10	4196	12	0	0	0	0	multi-exon	FALSE	canonical	1	642	junction_2	295.241797529185	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTATGTGTATTAACAAT	-102832217	True	NA	-11	True	AATAGA	-20	NA	102864163	102826307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_102828679_102829271_102829487_102829820_102829937_102833055_102833219_102834188_102834264_102834665_102834748_102836255_102836391_102838743_102838917_102839649_102839824_102843550_102843748_102858012_102858151_102863806
transcript_138389.nic	chr8	-	2427	2	ISM	ENSG00000155096.15	ENST00000347770.8	2857	13	22	28266	-8	-6090	5prime_fragment	FALSE	canonical	3	1534	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTGACCTGGATCTGT	-102832225	True	NA	NA	False	AAAACA	-4	NA	102864171	102856088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_102858151_102863806
transcript_138394.known	chr8	+	5635	13	FSM	ENSG00000155097.12	ENST00000518738.2	5635	13	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_3	27.2930343168769	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	103014918	True	NA	14	True	AATAAA	-16	NA	103021082	103073051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103021226_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_138397.known	chr8	+	5612	13	FSM	ENSG00000155097.12	ENST00000395862.7	5612	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	96.6181990563315	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAGAGAGATGTGGTTT	103014898	True	NA	14	True	AATAAA	-16	NA	103021062	103073051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103021183_103040797_103040969_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_1384.known	chr1	-	1614	9	FSM	ENSG00000097021.20	ENST00000377855.6	1614	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	256.698236018481	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCACGTGTCCTGGGTGGT	-6385801	False	6027	-7	True	AATAAA	-17	NA	6385813	6264272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6264696_6281101_6281287_6294863_6294981_6318491_6318579_6327298_6327414_6333476_6333569_6339432_6339590_6349748_6349867_6385493
transcript_138402.known	chr8	+	1484	12	FSM	ENSG00000155097.12	ENST00000521514.5	1484	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	102.878970857159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTGTTCACAGGGG	103014923	True	NA	67	True	NA	NA	NA	103021087	103069076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103021226_103042339_103042408_103048869_103048956_103051049_103051145_103052730_103052823_103053883_103053983_103055867_103055937_103062954_103063048_103063134_103063229_103064713_103064812_103066320_103066448_103068651
transcript_13841.known	chr1	+	1134	7	FSM	ENSG00000117266.16	ENST00000512922.5	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	30.1464020333365	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAGGCCTCGGGGGCAG	NA	False	NA	NA	False	NA	NA	NA	205504595	205526835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205504797_205523146_205523626_205524231_205524358_205525138_205525196_205526064_205526180_205526366_205526462_205526774
transcript_138413.known	chr8	-	496	2	FSM	ENSG00000236939.3	ENST00000436771.2	666	2	170	0	170	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACATGTCCCCGTCTCTG	NA	False	NA	NA	False	AATAAA	-20	NA	103141342	103132962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103133370_103141253
transcript_138414.known	chr8	-	421	2	FSM	ENSG00000236939.3	ENST00000521246.2	469	2	45	3	37	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTACATGTCCCCGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	103141475	103132965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103133370_103141458
transcript_138415.known	chr8	+	2774	8	FSM	ENSG00000164930.12	ENST00000523739.5	2774	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	22.7138364735449	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGCTTTTACACTGAATT	103297430	True	NA	NA	False	NA	NA	NA	103298864	103331994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103298996_103299955_103300085_103300199_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_138417.known	chr8	+	3728	7	FSM	ENSG00000164930.12	ENST00000358755.5	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	11.3834675443528	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103297463	True	NA	16	True	AATAAA	-19	NA	103298897	103332866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103328267_103328417_103329654_103330066_103331340
transcript_138419.known	chr8	+	3646	6	FSM	ENSG00000164930.12	ENST00000522484.5	3646	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	25.1507455157894	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGAGTATTCTGTGGTT	103298819	False	NA	16	True	AATAAA	-19	NA	103298830	103332866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103298996_103299955_103300285_103318589_103318787_103324480_103325499_103329654_103330066_103331340
transcript_138428.known	chr8	-	2891	7	FSM	ENSG00000164933.12	ENST00000297578.9	2891	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	23.5065002830186	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCTTGTGTGATAGATAA	-103412004	True	NA	-1	True	AATAAA	-28	NA	103415107	103398637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103404775_103404862_103407633_103407785_103414783
transcript_138432.known	chr8	-	1347	6	FSM	ENSG00000164933.12	ENST00000523866.1	1347	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	53.0056600751278	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATTGCTTTAAAATTAACC	-103411966	True	NA	NA	False	NA	NA	NA	103415069	103400057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_103400547_103401515_103401662_103401940_103402055_103403163_103403325_103407633_103407785_103414783
transcript_138436.known	chr8	+	1970	11	FSM	ENSG00000164934.14	ENST00000612750.5	1970	11	0	0	0	0	multi-exon	FALSE	canonical	2	1353	junction_2	226.809699968939	5060	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCCTATTTTTGGTAA	103405890	True	NA	12	True	ATTAAA	-21	NA	103415385	103443453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_103415517_103420263_103420464_103420974_103421083_103426055_103426146_103427096_103427253_103430611_103430690_103432658_103432742_103435625_103435791_103440135_103440272_103441454_103441619_103442794
transcript_138438.known	chr8	+	1062	6	FSM	ENSG00000176406.23	ENST00000523362.5	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.12795348811006	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCAACCTTGGCCCCTCT	104223278	True	NA	NA	False	NA	NA	NA	104223363	104251736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_104223794_104244915_104245058_104248700_104248814_104249486_104249589_104251023_104251164_104251601
transcript_13844.known	chr1	+	588	4	FSM	ENSG00000174514.13	ENST00000465651.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTCTCAATGGCTATTCA	205592009	True	NA	NA	False	NA	NA	NA	205592036	205600550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_205592288_205597779_205597851_205599130_205599252_205600405
transcript_138441.nic	chr8	+	1035	2	ISM	ENSG00000176406.23	ENST00000632716.1	3500	20	-251	317058	-196	-70944	5prime_fragment	FALSE	canonical	1	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAAACCCACAAAA	103500479	False	NA	NA	False	NA	NA	NA	103500499	103697557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_103501063_103697085
transcript_138444.known	chr8	+	2956	16	FSM	ENSG00000164830.19	ENST00000442977.6	2956	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.1470561435173	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTGTTAGAATTTGGGC	NA	False	NA	NA	False	NA	NA	NA	106447923	106751173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106448049_106518942_106519140_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_138445.known	chr8	+	4406	14	FSM	ENSG00000164830.19	ENST00000312046.10	4406	14	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_9	22.0808090924566	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTTGGATTTATTGAAT	106656104	True	NA	NA	False	AATAAA	-21	NA	106657853	106752694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381_106707146_106710621_106710791_106713822_106713986_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_138447.known	chr8	+	1436	7	FSM	ENSG00000164830.19	ENST00000438229.6	1436	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	30.0702880302504	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGGAGCAAAATCAGGA	106656141	True	NA	NA	False	TTTAAA	-31	NA	106657890	106706982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106658086_106679209_106679293_106683198_106683307_106684245_106684360_106692727_106692878_106702905_106703091_106706381
transcript_138448.known	chr8	+	1944	7	FSM	ENSG00000164830.19	ENST00000297447.10	1944	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	41.0301379746915	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATGAAAAGATAGAATA	NA	False	NA	NA	False	NA	NA	NA	106726106	106752016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106726310_106737519_106737601_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_138452.known	chr8	+	2621	6	FSM	ENSG00000164830.19	ENST00000449762.6	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	39.8878427594173	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAATACAAATGAGT	NA	False	NA	NA	False	AATAAA	-6	NA	106726011	106752679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106726310_106739457_106739584_106740342_106740496_106742221_106742318_106745788_106745863_106750805
transcript_138457.nic	chr8	+	1077	5	ISM	ENSG00000164830.19	ENST00000312046.10	4406	14	-1	59528	-1	8826	5prime_fragment	FALSE	canonical	3	73	junction_2	10.4970233876085	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTGTGGAGTGTGAA	106656103	True	NA	NA	False	AATAAA	-14	NA	106657852	106693166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_106658186_106679209_106679293_106683198_106683307_106684245_106684360_106692727
transcript_138458.nnic	chr8	+	894	2	NNC	ENSG00000164830.19	novel	1148	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106270267	True	NA	15	True	AATAAA	-17	NA	106270290	106272774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_106270368_106271957
transcript_138459.nnic	chr8	+	1019	2	NNC	ENSG00000164830.19	novel	1318	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGCCTGTATTGTTTTG	106270267	True	NA	NA	False	AATAAA	-14	NA	106270290	106272899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_106270368_106271957
transcript_138460.known	chr8	+	1148	2	FSM	ENSG00000164830.19	ENST00000658832.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGGCTTTTATGGCTAT	106270266	True	NA	15	True	AATAAA	-17	NA	106270289	106272774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106270368_106271704
transcript_138462.known	chr8	+	1174	2	FSM	ENSG00000164830.19	ENST00000661818.1	1174	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCTGTATTGTTTTGTTT	106270267	True	NA	NA	False	AATAAA	-17	NA	106270290	106272902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_106270368_106271805
transcript_138464.nnic	chr8	-	284	2	NNC	ENSG00000253582.1	novel	504	4	NA	NA	-7	-135764	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTCAGTCTATGGTGCT	-106657468	True	NA	NA	False	AATAAA	-18	NA	106657555	106656237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_106656366_106657399
transcript_138466.known	chr8	-	4353	9	FSM	ENSG00000154188.10	ENST00000297450.7	4353	9	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_8	4.789311015167	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAACTTCATTTT	-107497761	False	NA	NA	False	AATAAA	-12	NA	107498055	107249492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_107252016_107264220_107264352_107284681_107284849_107293935_107294038_107303239_107303368_107321898_107322129_107336149_107336272_107346941_107347098_107497261
transcript_138470.known	chr8	-	1732	14	FSM	ENSG00000104408.11	ENST00000518100.6	1732	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	1363.4735314651	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCAGTTTTCTTGCAT	-108209452	True	NA	-25	True	AATAAA	-18	NA	108248716	108201739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108242111_108242347_108248612
transcript_138472.known	chr8	-	1609	14	FSM	ENSG00000104408.11	ENST00000676642.1	1609	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	1607.08969567378	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATATTACGTATAAATTT	-108209452	True	NA	-79	True	AATAAA	-36	NA	108248716	108201793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235098_108236160_108236204_108239957_108240076_108241798_108241914_108243292_108243464_108248612
transcript_138477.known	chr8	-	1394	12	FSM	ENSG00000104408.11	ENST00000519030.6	1394	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	1126.36626311235	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-108209469	True	NA	-30	True	AATAAA	-13	NA	108248733	108201744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108248612
transcript_138480.known	chr8	-	2467	11	FSM	ENSG00000104408.11	ENST00000678773.1	2467	11	0	0	0	0	multi-exon	FALSE	canonical	2	95	junction_10	1124.30204571547	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATTTACAAAAACAGGC	-108209466	True	NA	NA	False	NA	NA	NA	108248730	108200550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108248612
transcript_138482.known	chr8	-	1121	9	FSM	ENSG00000104408.11	ENST00000519627.2	1121	9	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_8	1223.03213750702	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTGCTGTCAGTTTTCT	-108209462	True	NA	-30	True	AATAAA	-13	NA	108248726	108201744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108248612
transcript_138488.known	chr8	-	527	4	FSM	ENSG00000104408.11	ENST00000522352.6	527	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	1857.18520586636	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209456	True	NA	-28	True	AATAAA	-15	NA	108248720	108201742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108248612
transcript_138491.known	chr8	-	1158	10	FSM	ENSG00000104408.11	ENST00000521297.2	1158	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	1255.16619331446	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209455	True	NA	-28	True	AATAAA	-15	NA	108248719	108201742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_138492.known	chr8	-	1501	13	FSM	ENSG00000104408.11	ENST00000676698.1	1501	13	0	0	0	0	multi-exon	FALSE	canonical	2	45	junction_1	1087.26798291252	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTGTCAGTTTTCTTG	-108209466	True	NA	-28	True	AATAAA	-15	NA	108248730	108201742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202989_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_138493.known	chr8	-	1485	13	FSM	ENSG00000104408.11	ENST00000522445.6	1485	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	1089.63097728849	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGAAGAATTGGAATAAA	-108209454	True	NA	-62	True	TATAAA	-40	NA	108248718	108201776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108201924_108202982_108203118_108203400_108203504_108214606_108214717_108216411_108216514_108217333_108217461_108228266_108228392_108229069_108229196_108234997_108235103_108236160_108236204_108239957_108240099_108241798_108241914_108248612
transcript_138494.known	chr8	-	4050	6	FSM	ENSG00000104408.11	ENST00000677447.1	4050	6	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	1571.52290470104	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTAGACATGTATTCTTC	-108209466	True	NA	1	True	ATTAAA	-19	NA	108248730	108230121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108233673_108234997_108235103_108236160_108236204_108239957_108240076_108241798_108241914_108248612
transcript_138501.known	chr8	+	3527	11	FSM	ENSG00000104412.8	ENST00000220853.8	3527	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	36.2403090494549	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGTTTCCTGTTACTT	108437445	True	NA	17	True	AATAAA	-21	NA	108443623	108489196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872_108455931_108469825_108469912_108470061_108470122_108475881_108475964_108476781_108476893_108479005_108479111_108486511
transcript_138502.known	chr8	+	532	5	FSM	ENSG00000104412.8	ENST00000517593.5	532	5	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	21.5450110234365	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCATGATGGGCCACAGTT	108437454	True	NA	NA	False	ATTAAA	-28	NA	108443632	108456073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_108443699_108449822_108449937_108450427_108450493_108453061_108453148_108455872
transcript_138503.known	chr8	-	6283	2	FSM	ENSG00000164841.5	ENST00000297459.4	6283	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGTTTGTCATTCTTCT	-108786785	True	NA	0	True	ATTAAA	-19	NA	108787594	108778973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_108785138_108787475
transcript_138508.known	chr8	-	3811	10	FSM	ENSG00000120526.12	ENST00000678094.1	3811	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	168.719652049352	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATAGTACCTTGTATT	-109324238	True	NA	-109	True	NA	NA	NA	109334121	109241020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109243302_109245321_109245442_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_138512.known	chr8	-	3919	10	FSM	ENSG00000120526.12	ENST00000239690.9	3919	10	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	42.1841934003663	811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAGAGTCATTAACAAT	-109324204	True	NA	-7	True	AATAAA	-23	NA	109334087	109240918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109243302_109245321_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_138520.known	chr8	-	2542	9	FSM	ENSG00000120526.12	ENST00000676569.1	2542	9	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_5	26.1698180161804	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTATAGGGGAATTCTA	-109324238	True	NA	NA	False	NA	NA	NA	109334121	109244349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_109245482_109271004_109271131_109275351_109275497_109280967_109281173_109289750_109289934_109293343_109293525_109296383_109296570_109322308_109322464_109333892
transcript_138542.known	chr8	+	541	4	FSM	ENSG00000120533.13	ENST00000522407.5	541	4	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_1	1640.18677798191	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCTTGGATTTTGAAAT	109310481	True	NA	28	True	AATAAA	-22	NA	109334346	109343671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334475_109339319_109339391_109340488_109340564_109343404
transcript_138543.known	chr8	+	546	5	FSM	ENSG00000120533.13	ENST00000339942.11	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1627.19027390776	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGCTTGGATTTTGAAA	109310473	True	NA	27	True	AATAAA	-21	NA	109334338	109343670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334403_109336132_109336205_109339319_109339391_109340490_109340564_109343404
transcript_138544.known	chr8	+	567	5	FSM	ENSG00000120533.13	ENST00000522766.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_3	1442.82890531067	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTAAATGTGTTATTTT	109310458	True	NA	-19	True	NA	NA	NA	109334323	109343624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334403_109336127_109336205_109339319_109339391_109340443_109340564_109343404
transcript_138545.known	chr8	+	2150	4	FSM	ENSG00000120533.13	ENST00000517350.5	2150	4	0	0	0	0	multi-exon	FALSE	canonical	3	3293	junction_1	114.77223822278	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTTTTCAGTAATGATG	109310515	True	NA	26	True	AATAAA	-22	NA	109334380	109343584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109336205_109339319_109339391_109340488_109340564_109343404
transcript_138546.known	chr8	+	1540	5	FSM	ENSG00000120533.13	ENST00000523335.1	1540	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_3	1285.7204935366	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATGGTACCTCCTAGC	109310485	True	NA	NA	False	NA	NA	NA	109334350	109344599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334475_109336127_109336205_109339319_109339391_109340490_109340564_109343404
transcript_138547.known	chr8	+	857	6	FSM	ENSG00000120533.13	ENST00000520147.5	857	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1671.1403292363	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAATTGTAATGCC	109310478	True	NA	-19	True	NA	NA	NA	109334343	109343855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334407_109336127_109336205_109339319_109339391_109340488_109340564_109342689_109342810_109343404
transcript_138548.known	chr8	+	445	3	FSM	ENSG00000120533.13	ENST00000517756.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1237.5	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGTTTGCTTGGATTT	109310502	True	NA	22	True	AATAAA	-16	NA	109334367	109343665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334475_109336127_109336205_109343404
transcript_138549.known	chr8	+	561	3	FSM	ENSG00000120533.13	ENST00000519754.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	1278.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCATCTATGAAAGCTCTT	109310480	True	NA	NA	False	NA	NA	NA	109334345	109339746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109334403_109336127_109336205_109339319
transcript_138551.known	chr8	+	19969	78	FSM	ENSG00000205038.12	ENST00000378402.10	19969	78	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	0.61025143503744	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAGAACAGCAGGTCTAAA	109362444	True	NA	NA	False	AATAAA	-18	NA	109362460	109537207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109362654_109364546_109364637_109381369_109381515_109382462_109382572_109384069_109384128_109385536_109385631_109388496_109388551_109389078_109389153_109390451_109390495_109394414_109394486_109396026_109396138_109398458_109398549_109400075_109400345_109401496_109401589_109404553_109404714_109404994_109405131_109406334_109406479_109408048_109408207_109409864_109409979_109412264_109412415_109413420_109413546_109419096_109419261_109420517_109420691_109425084_109425233_109427001_109427157_109429339_109429463_109429931_109430038_109433105_109433217_109435189_109435355_109436337_109436460_109438323_109438457_109438896_109439093_109440709_109440853_109441274_109441380_109442006_109442196_109442945_109443117_109443675_109443903_109444660_109445646_109448142_109448392_109449337_109449488_109450974_109451150_109452123_109452281_109452717_109452875_109454166_109454247_109454722_109454853_109456261_109456392_109459594_109459837_109461771_109461909_109464215_109465246_109466577_109466770_109475117_109475270_109476507_109476668_109477224_109477397_109479550_109479640_109479990_109480140_109481432_109481563_109482986_109483106_109485043_109485174_109486647_109486822_109489951_109490056_109490971_109491102_109491872_109491995_109493660_109493752_109496918_109497068_109497149_109497273_109498461_109498574_109498654_109498772_109504326_109504493_109507662_109507896_109508096_109508265_109510776_109510935_109515169_109515306_109518166_109518509_109522185_109522338_109522743_109522891_109523232_109523387_109526783_109527021_109530079
transcript_138555.known	chr8	+	1467	7	FSM	ENSG00000147654.15	ENST00000395785.6	1467	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	39.1648935768871	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTTTGTACATCATTA	109539253	True	NA	NA	False	ATTAAA	-22	NA	109539710	109565160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109539920_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_138561.known	chr8	+	2383	7	FSM	ENSG00000147654.15	ENST00000337573.10	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	51.9575146955023	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGCTCAAAGTTTTAATA	109539177	False	NA	NA	False	AATAAA	-19	NA	109540172	109565996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_109540462_109550809_109550908_109553864_109553944_109554728_109554888_109556934_109557043_109560837_109560930_109564438
transcript_13858.known	chr1	-	6399	7	FSM	ENSG00000069275.13	ENST00000367142.5	6399	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	24.2859126976022	2989	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACACACTTGCATTCAATT	-205742774	True	NA	-1	True	AATAAA	-21	NA	205750182	205712821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205718480_205719526_205719677_205720500_205720654_205723925_205723982_205727699_205727806_205729571_205729622_205749956
transcript_13859.known	chr1	-	3308	6	FSM	ENSG00000117280.13	ENST00000367139.8	3308	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	23.9131762842162	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGTGGTTATTGGCCT	-205774606	True	NA	-12	True	AATAAA	-19	NA	205775482	205767985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775272
transcript_138596.known	chr8	+	836	3	FSM	ENSG00000254339.6	ENST00000523682.1	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	238	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCATGGAAGTATTTCAAA	114265208	True	NA	NA	False	NA	NA	NA	114282068	114295813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284252_114284515_114295465
transcript_138599.known	chr8	+	877	3	FSM	ENSG00000254339.6	ENST00000520543.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	228.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATGAATATTGATTAT	114265212	True	NA	NA	False	NA	NA	NA	114282072	114295839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284252_114284534_114295465
transcript_138600.nnic	chr8	+	1113	3	NIC	ENSG00000254339.6	novel	925	3	NA	NA	-182	0	combination_of_known_junctions	FALSE	canonical	3	333	junction_2	43	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTGCTAGGTGTGCTA	114281783	True	NA	NA	False	AATAAA	-14	NA	114281854	114304805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_114282295_114284252_114284534_114304413
transcript_138625.nnic	chr8	+	1196	2	NIC	ENSG00000254339.6	novel	1734	3	NA	NA	-143	-401	combination_of_known_splicesites	FALSE	canonical	3	103	junction_1	0	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGGAGGCCAAGAGGGAA	114281128	True	NA	-52	True	AATATA	-21	NA	114281893	114296260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_114282295_114295465
transcript_138626.known	chr8	+	730	3	FSM	ENSG00000254339.6	ENST00000519248.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	902	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAAAAAGTCTTCTT	114265275	False	NA	NA	False	NA	NA	NA	114282135	114287996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284218_114284515_114287721
transcript_138627.known	chr8	+	866	3	FSM	ENSG00000254339.6	ENST00000521523.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	895	junction_2	592	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGTTTATCATGGAAGTAT	114265206	True	NA	NA	False	NA	NA	NA	114282066	114295807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284218_114284515_114295465
transcript_138628.known	chr8	+	697	3	FSM	ENSG00000254339.6	ENST00000507929.3	1734	3	0	1037	0	-183	multi-exon	FALSE	canonical	3	876	junction_2	601.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTAGCAAGTTTGAATAGC	114265211	True	NA	NA	False	NA	NA	NA	114282071	114295624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_114282295_114284218_114284534_114295465
transcript_138630.nnic	chr8	-	868	4	Intergenic	novelGene_66	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_3	18.6964048831735	73	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATCCTTTACA	NA	False	NA	NA	False	ATTAAA	-28	NA	114504572	114302730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_-_114303145_114304406_114304496_114394909_114394988_114504285
transcript_138631.nnic	chr8	-	715	4	Intergenic	novelGene_67	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_3	18.6964048831735	77	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTTTGATGAATTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	114504572	114302883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_-_114303145_114304406_114304496_114394909_114394988_114504285
transcript_138633.nnic	chr8	-	789	3	Intergenic	novelGene_65	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	9	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATCCTTTACA	NA	False	NA	NA	False	ATTAAA	-28	NA	114504571	114302730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_-_114303145_114304406_114304496_114504285
transcript_138638.nnic	chr8	+	1158	4	Antisense	novelGene_ENSG00000253756.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_3	4.96655480858378	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGCTTTGTTTGTGTGT	114585686	True	NA	NA	False	AGTAAA	-14	NA	114585915	114902990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_114586397_114597954_114598044_114648375_114648438_114902464
transcript_138641.nnic	chr8	+	870	3	Antisense	novelGene_ENSG00000253756.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	1	5	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGCTTTGTTTGTGTGT	114636374	True	NA	NA	False	AGTAAA	-14	NA	114636774	114902990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_114637057_114648375_114648438_114902464
transcript_13866.known	chr1	-	1306	5	FSM	ENSG00000117280.13	ENST00000437324.6	1306	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	29.8024747294583	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCCAGCACTTGGGGAGG	-205774575	True	NA	NA	False	NA	NA	NA	205775451	205769702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205775272
transcript_138661.known	chr8	-	3961	8	FSM	ENSG00000147677.12	ENST00000521861.6	3961	8	0	0	0	0	multi-exon	FALSE	canonical	3	1636	junction_5	79.1758569674532	5400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTATGTAATACACTGT	-116738331	True	NA	-2	True	AATAAA	-16	NA	116755823	116642129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726173_116755665
transcript_138662.known	chr8	-	1265	9	NNC	ENSG00000147677.12	novel	3961	8	NA	NA	0	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	751.92432298736	3268	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTAGATGTATTTTCTCT	-116738331	True	NA	-11	True	AATAAA	-33	NA	116755823	116644816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_116645104_116646470_116646604_116648805_116648927_116655855_116656006_116657214_116657315_116658812_116658981_116726015_116726161_116737712_116737716_116755665
transcript_138663.known	chr8	-	1047	3	FSM	ENSG00000147677.12	ENST00000518034.5	1047	3	0	0	0	0	multi-exon	FALSE	canonical	3	1687	junction_2	20	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTGCATATAGTTTCCAGC	-116738331	True	NA	NA	False	NA	NA	NA	116755823	116658248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_116658981_116726015_116726173_116755665
transcript_138666.known	chr8	+	3672	3	FSM	ENSG00000147679.12	ENST00000309822.7	3672	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	12.5	356	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCATCTCCTTGTACTTC	116764241	True	NA	NA	False	ATTAAA	-17	NA	116766523	116774684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116766792_116770191_116770367_116771455
transcript_138671.known	chr8	-	3660	14	FSM	ENSG00000164754.16	ENST00000297338.7	3660	14	0	0	0	0	multi-exon	FALSE	canonical	3	872	junction_13	77.9100528260695	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTATTCATTAT	-116864589	True	NA	-1	True	AATAAA	-20	NA	116874776	116845933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_116847692_116848945_116849030_116850617_116850768_116851947_116852097_116852548_116852709_116854244_116854469_116856165_116856289_116856645_116856772_116857266_116857474_116858351_116858459_116861840_116861941_116863129_116863260_116866585_116866762_116874610
transcript_138673.known	chr8	+	2291	2	FSM	ENSG00000205002.4	ENST00000378279.4	2291	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATCTGAGAATTATCTGG	NA	False	NA	NA	False	AATAAA	-45	NA	116938206	116944487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116938568_116942557
transcript_138674.known	chr8	+	500	2	FSM	ENSG00000205002.4	ENST00000523536.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGACAGAGCTTGCAG	116938498	False	NA	NA	False	NA	NA	NA	116938545	116942922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_116938681_116942557
transcript_138678.known	chr8	+	985	4	FSM	ENSG00000164758.7	ENST00000297347.7	985	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	2.49443825784929	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGATTAATGGATTTAC	117518532	True	NA	14	True	AATAAA	-21	NA	117520712	117540262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_117521054_117528650_117528810_117530722_117530828_117539882
transcript_138679.known	chr8	+	476	3	FSM	ENSG00000164758.7	ENST00000522839.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	85	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGATATTTAAATTTCCTG	117518652	True	NA	NA	False	TATAAA	-26	NA	117520832	117539978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_117521054_117528650_117528810_117539882
transcript_138684.known	chr8	-	782	5	FSM	ENSG00000177570.15	ENST00000524796.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	11.3880419739304	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAAATCTTGCTTTGCT	-118620465	True	NA	NA	False	AAAAAG	-28	NA	118621949	118197546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_118197733_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_138685.known	chr8	-	8809	5	FSM	ENSG00000177570.15	ENST00000409003.5	8809	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.7931142241337	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTTTTGATTCTGATTTTC	-118620430	True	NA	4	True	ATTAAA	-28	NA	118621914	118189454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_118197733_118379559_118379701_118439861_118439962_118580714_118580894_118621803
transcript_138686.nic	chr8	-	796	5	NIC	ENSG00000177570.15	novel	780	5	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	11.7579760163048	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAAGGAAAAAGGGTGA	-118620509	True	NA	NA	False	AATAAA	-15	NA	118621993	118375700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_118375857_118379559_118379701_118439831_118439962_118580714_118580894_118621803
transcript_138694.known	chr8	+	1980	7	FSM	ENSG00000281641.3	ENST00000664584.1	1980	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.7950549357115	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGCAGACATTCAGGAAG	118621324	True	NA	NA	False	ATTAAA	-3	NA	118621405	118906083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_118621656_118668449_118668602_118724518_118724629_118725935_118726068_118764268_118764385_118903658_118903780_118904984
transcript_138695.known	chr8	-	2087	5	FSM	ENSG00000164761.9	ENST00000297350.9	2087	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.92028643696715	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTTTTCTGTTGCTTTT	-118951838	False	47	-2	True	ATTAAA	-20	NA	118951885	118923556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_118924763_118926493_118926719_118928737_118928930_118932930_118933301_118951791
transcript_138696.known	chr8	+	2826	4	FSM	ENSG00000147676.14	ENST00000614891.5	2826	4	0	0	0	0	multi-exon	FALSE	canonical	3	1174	junction_2	160.441751285492	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGGTCATCTTTTAC	119198062	True	NA	30	True	AATAAA	-16	NA	119208362	119245673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_119208605_119221586_119221758_119240164_119240321_119243416
transcript_138698.known	chr8	+	892	4	FSM	ENSG00000147676.14	ENST00000531508.1	892	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	661.109673201051	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTAATTTTATTATGAT	119208827	False	NA	-37	True	NA	NA	NA	119208867	119243648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_119209201_119221586_119221758_119240164_119240321_119243416
transcript_13870.known	chr1	-	1441	4	FSM	ENSG00000117280.13	ENST00000446390.6	1441	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	32.8362942827327	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCTCATGCCTGTAATCC	-205774357	False	NA	NA	False	NA	NA	NA	205775233	205769717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205774832
transcript_138701.known	chr8	-	3086	25	FSM	ENSG00000136960.13	ENST00000075322.11	3086	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	5.58208941367139	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTTTATTTGGCTTT	-119638750	True	NA	-1	True	AATAAA	-17	NA	119638839	119557085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119557692_119562856_119563014_119564822_119564956_119568174_119568253_119569234_119569371_119570704_119570842_119580115_119580168_119582417_119582603_119583716_119583805_119583961_119584050_119586185_119586314_119587043_119587076_119590504_119590631_119593751_119593861_119600677_119600751_119601396_119601463_119607921_119607978_119616264_119616385_119617163_119617244_119617465_119617564_119619243_119619305_119621393_119621520_119626564_119626721_119638424_119638528_119638747
transcript_138704.known	chr8	-	5027	26	FSM	ENSG00000064313.13	ENST00000378164.7	5027	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	33.4137696167314	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTCTGTCTTTGTAGCTT	-119828126	True	NA	-2	True	AATAAA	-17	NA	119832841	119730773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119732187_119742533_119742657_119744287_119744394_119746704_119746935_119756005_119756116_119758072_119758143_119760598_119760739_119762414_119762609_119778018_119778130_119781052_119781194_119783380_119783634_119785200_119785267_119788337_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_138707.nic	chr8	-	2073	14	ISM	ENSG00000064313.13	ENST00000690144.1	5377	26	-5	57302	1	6372	5prime_fragment	FALSE	canonical	0	0	junction_13	35.0117478170842	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCCAAAAGTAGAAGGTAG	-119828145	True	NA	-17	True	AAGAAA	-28	NA	119832860	119788353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_119788448_119788789_119788905_119789591_119789747_119791323_119791460_119793365_119793452_119795531_119795632_119796989_119797104_119797661_119797847_119801793_119802026_119803877_119804020_119806282_119806402_119819345_119819507_119831676_119831732_119832481
transcript_138713.known	chr8	-	2198	9	FSM	ENSG00000136982.6	ENST00000313655.5	2198	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_7	21.8113359288238	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGGATTATATGATATATA	-119849940	True	NA	-34	True	AATAAA	-15	NA	119855894	119833975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119835002_119838258_119838408_119841793_119841949_119842775_119842829_119843608_119843748_119846989_119847081_119850381_119850517_119853046_119853216_119855613
transcript_13872.nnic	chr1	-	810	3	NNC	ENSG00000117280.13	novel	3308	6	NA	NA	8	-2579	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	4.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGTGAAATATACCACTT	-205774598	True	NA	NA	False	AATAAA	-23	NA	205775474	205774176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_205774531_205774832_205775087_205775272
transcript_138739.known	chr8	-	703	2	FSM	ENSG00000136982.6	ENST00000521795.1	703	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGTAGATTTTGCTGT	-119849904	True	NA	NA	False	NA	NA	NA	119855858	119852757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_119853216_119855613
transcript_138741.known	chr8	+	2569	9	FSM	ENSG00000155792.10	ENST00000286234.6	2569	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	6.40312423743285	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTCTTTTCATTAGGT	119873687	False	NA	13	True	AATAAA	-20	NA	119873721	120050918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_119873969_119928399_119928579_119929814_119929939_119965231_119965411_120001524_120001711_120002976_120003112_120006804_120006876_120009028_120009134_120049575
transcript_138744.nic	chr8	+	801	3	ISM	ENSG00000155792.10	ENST00000286234.6	2569	9	-34	120763	-29	-119436	5prime_fragment	FALSE	canonical	3	45	junction_2	1.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTATTTAAGTTGAT	NA	False	NA	NA	False	AATAAA	-19	NA	119873687	119930155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_119873969_119928399_119928579_119929814
transcript_138748.nic	chr8	+	727	5	ISM	ENSG00000187955.13	ENST00000432943.6	3828	27	-122	109683	-80	-48310	5prime_fragment	FALSE	canonical	3	24	junction_1	2.9474565306379	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCAAAGCCCAGAGTCA	120124999	False	NA	NA	False	AAAAAG	-4	NA	120125021	120168182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160
transcript_13875.known	chr1	-	1723	6	FSM	ENSG00000117280.13	ENST00000235932.8	1723	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	23.9131762842162	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAATAGTCATTTT	-205774573	True	NA	NA	False	NA	NA	NA	205775449	205769436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205770454_205770732_205770855_205771471_205771654_205772495_205772568_205774832_205775087_205775373
transcript_138751.known	chr8	+	8009	48	FSM	ENSG00000187955.13	ENST00000297848.8	8009	48	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_47	6.7565838990283	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTACTCTTCAGAATTCTC	120124159	True	NA	NA	False	AATAAA	-18	NA	120125101	120373573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120125341_120147805_120147931_120158129_120158247_120162425_120162570_120168160_120168248_120196790_120196947_120197810_120197931_120199401_120199567_120203708_120203871_120206942_120207095_120208231_120208362_120209755_120209902_120212447_120212578_120216350_120216491_120225087_120225215_120226626_120226767_120227219_120227353_120228709_120228770_120231466_120231619_120243878_120244009_120247612_120247736_120250616_120250767_120255239_120255357_120262867_120263015_120266826_120266884_120270034_120270175_120278110_120278235_120278434_120278579_120279934_120280100_120280710_120280750_120280920_120281060_120283635_120283779_120285860_120285971_120289607_120289767_120297510_120297589_120300731_120300819_120310008_120310063_120313931_120314028_120315532_120315587_120315943_120315998_120332140_120332195_120332663_120332736_120341324_120341361_120342379_120342447_120345374_120345564_120367170_120367249_120369329_120369486_120371151
transcript_138754.known	chr8	+	3067	22	FSM	ENSG00000172167.8	ENST00000305949.6	3067	22	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_17	14.3789024082897	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGATTTCATGTCTT	120442817	True	NA	NA	False	AATAAA	-19	NA	120445418	120523636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170_120451323_120453846_120453906_120455434_120455580_120456552_120456671_120459214_120459350_120461160_120461256_120463691_120463762_120470819_120470938_120488158_120488333_120490462_120490571_120497392_120497555_120502491_120502610_120506705_120506862_120509933_120510030_120515924_120516192_120517850_120518101_120518703_120518818_120522653_120522720_120523297
transcript_13876.known	chr1	-	5017	11	FSM	ENSG00000133065.11	ENST00000367137.4	5017	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	10.6117859005919	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTGGTGTTTCCTGTA	-205810316	True	NA	-2	True	AATAAA	-16	NA	205813198	205789094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205791719_205794869_205795019_205795343_205795479_205796923_205797004_205797903_205798052_205798668_205798816_205798956_205799102_205799758_205799831_205800952_205801061_205810069_205811088_205812807
transcript_138773.known	chr8	+	1981	4	FSM	ENSG00000172167.8	ENST00000522308.1	1981	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	6.48074069840786	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	120442820	True	NA	NA	False	NA	NA	NA	120445421	120452829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_120445589_120446432_120446514_120451002_120451077_120451170
transcript_138775.known	chr8	+	1656	4	FSM	ENSG00000248690.8	ENST00000514180.5	1656	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTACATACCAACTTAATA	NA	False	NA	NA	False	AATAAA	-4	NA	121639345	121644693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_121640169_121641189_121641447_121642583_121642732_121644265
transcript_138779.known	chr8	+	1462	4	FSM	ENSG00000248690.8	ENST00000656304.1	1462	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTACTCTGATAACACA	121641267	True	NA	NA	False	ATTAAA	-7	NA	121641319	121645299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_121641455_121642583_121642732_121643372_121643518_121644265
transcript_138780.known	chr8	-	4240	4	FSM	ENSG00000170961.7	ENST00000303924.5	4240	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	17.0163320241336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGCCTTTTTTTCTAAG	-121641059	True	NA	0	True	AATAAA	-16	NA	121641440	121612115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_121615039_121617104_121617207_121628713_121629341_121640852
transcript_138783.nic	chr8	-	926	2	ISM	ENSG00000170961.7	ENST00000303924.5	4240	4	-119	17006	-119	-17006	5prime_fragment	FALSE	canonical	3	209	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCTAGAAACCCCCATAAA	-121641178	True	NA	NA	False	AATGAA	-5	NA	121641559	121629121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_121629341_121640852
transcript_138784.known	chr8	-	860	1	FSM	ENSG00000272384.1	ENST00000607710.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATGGCCTGCACCTGTT	-122780812	False	NA	-13	True	ATTAAA	-22	NA	122780830	122779970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_122780000_122780800
transcript_138786.known	chr8	+	4361	4	FSM	ENSG00000178764.8	ENST00000314393.6	4361	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	9.53356643071673	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCCTCTACTTCGCCT	122780988	True	NA	28	True	AATAAA	-24	NA	122781654	122974510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_122781947_122863476_122863540_122951291_122954029_122973241
transcript_138787.known	chr8	+	3478	22	FSM	ENSG00000156787.17	ENST00000287380.6	3478	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_11	35.6403679507437	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTAAGCTTTCAGGT	123070313	True	NA	14	True	AATAAA	-22	NA	123072706	123152153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123105287_123105465_123109316_123109397_123109473_123109621_123120054_123120189_123126055_123126190_123126507_123126688_123128280_123128514_123129065_123129219_123130197_123130334_123134113_123134207_123140760_123140902_123142261_123142457_123144716_123144856_123150035_123150129_123151805
transcript_13879.known	chr1	-	2164	13	FSM	ENSG00000162877.13	ENST00000367136.5	2164	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	0.9537935951883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCTGGTCACTGAGAGGT	-205850071	True	NA	NA	False	AATAAA	-16	NA	205850132	205828024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_205828744_205830279_205830380_205832597_205832767_205840251_205840324_205841810_205841890_205842153_205842216_205842675_205842752_205843666_205843787_205844086_205844218_205844810_205844898_205845324_205845558_205847884_205847972_205849903
transcript_138793.nic	chr8	+	1420	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-47	1412	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATTCTCAGAAGATTCTGA	123070241	True	NA	NA	False	AATACA	-18	NA	123072634	123102499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_138794.nic	chr8	+	2273	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-47	-849	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATATCTGCTCTTACTGA	123070241	True	NA	3	True	AATAAA	-15	NA	123072634	123103352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_138795.nic	chr8	+	3122	8	NIC	ENSG00000156787.17	novel	2985	20	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_7	34.7885742444151	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTCATGGTGTAAACAAG	123070241	True	NA	2	True	AATAAA	-33	NA	123072634	123104201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806_123101008_123102246
transcript_138799.known	chr8	+	1159	7	FSM	ENSG00000156787.17	ENST00000518099.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	20.4911905190716	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTTCTAACTTACCTGGA	123070329	True	NA	NA	False	AATAAA	-13	NA	123072722	123101087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123072847_123077110_123077258_123082701_123082818_123084161_123084341_123093590_123093743_123097281_123097442_123100806
transcript_13880.nnic	chr1	+	623	3	NNC	ENSG00000226780.1	novel	630	3	NA	NA	-658	-8492	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGCTTACAGCTCAAT	NA	False	NA	NA	False	AATAAA	-22	NA	206117124	206118313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_206117371_206117692_206117826_206118069
transcript_138802.nnic	chr8	+	465	3	NNC	ENSG00000156787.17	novel	1159	7	NA	NA	-47	-6789	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	92	147	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTAGTAGTTTCCTTTTT	123070241	True	NA	3	True	ATTAAA	-19	NA	123072634	123077480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_123072847_123077110_123077258_123077374
transcript_138807.known	chr8	-	918	4	FSM	ENSG00000136986.10	ENST00000419562.6	918	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	171.930864658508	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGGGTTTTAGCGGGT	-123036742	True	NA	36	True	NA	NA	NA	123042302	123015164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123041969
transcript_138811.known	chr8	-	3213	8	FSM	ENSG00000136986.10	ENST00000259512.9	3213	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_6	27.7892946646579	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGTGAGGAGTCATAT	-123036742	True	NA	NA	False	AATGAA	-17	NA	123042302	123013169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123015586_123019194_123019306_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_138812.known	chr8	-	1994	8	FSM	ENSG00000136986.10	ENST00000405944.7	1994	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	127.78425695887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTTTTCACACAGTTAT	-123042106	False	NA	-5	True	AATAAA	-15	NA	123042122	123014148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123015586_123019194_123019246_123021446_123021500_123022683_123022780_123023712_123023740_123024985_123025051_123030604_123030717_123041969
transcript_13882.known	chr1	+	6884	23	FSM	ENSG00000266028.8	ENST00000573034.8	6884	23	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_11	58.6714482774646	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCAGTTCATATCCCTT	206199393	True	NA	10	True	AATAAA	-20	NA	206203540	206464436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206203651_206205428_206206038_206303280_206303474_206342845_206343009_206384013_206384077_206392688_206392905_206393544_206393674_206401420_206401646_206405248_206405351_206406376_206406575_206415888_206415974_206419372_206419401_206421249_206421275_206430161_206430223_206436964_206437043_206437963_206438099_206439975_206440082_206446074_206446300_206450385_206450466_206453199_206453381_206454877_206455025_206458622_206458948_206461036
transcript_138820.known	chr8	-	4899	4	FSM	ENSG00000165156.15	ENST00000395571.8	4899	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	7.25718035235908	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGACCTTTTTTTTTTCA	-123274017	True	NA	NA	False	AATAAA	-20	NA	123274286	123248455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123250321_123253321_123256172_123267272_123267387_123274216
transcript_138825.known	chr8	-	1014	1	FSM	ENSG00000165156.15	ENST00000602651.1	1014	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTGGCATGTTCCTTAA	NA	False	NA	0	True	AATAAA	-19	NA	123253442	123252428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123252400_123253400
transcript_138826.known	chr8	-	1310	6	FSM	ENSG00000189376.12	ENST00000276704.6	1310	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	12.2081939696255	630	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTACTGCATTCAGTTTA	-123237429	True	NA	-10	True	TATAAA	-43	NA	123241377	123219966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123220298_123226499_123226633_123231299_123231758_123237797_123237942_123239048_123239145_123241229
transcript_138827.known	chr8	-	5547	28	FSM	ENSG00000156802.13	ENST00000287394.10	5547	28	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_21	25.8934187739369	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCTATTTCTTAAGT	-123390113	True	NA	0	True	AATAAA	-26	NA	123396447	123319849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_123321176_123322937_123323067_123325892_123326027_123328189_123328580_123333877_123334022_123334199_123334323_123336372_123336533_123337624_123337822_123339310_123339447_123344883_123345070_123346085_123346273_123346617_123346751_123347091_123347407_123348182_123348274_123349284_123349445_123356388_123356478_123357561_123357737_123359220_123359337_123359576_123359686_123361538_123361647_123369057_123369176_123369820_123370025_123370902_123370991_123371235_123371339_123371669_123371836_123372636_123372687_123380528_123380678_123396186
transcript_138834.nic	chr8	-	661	3	ISM	ENSG00000156802.13	ENST00000521496.5	3133	19	-272	28149	-226	0	5prime_fragment	FALSE	canonical	3	150	junction_2	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGAAGAGCACAG	-123396656	True	NA	NA	False	AATATA	-27	NA	123396673	123372661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_123372687_123380528_123380678_123396186
transcript_138839.known	chr8	+	853	8	FSM	ENSG00000156795.8	ENST00000523551.1	853	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	35.9818548375569	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCATGTTGGTGAAGCTA	123415287	True	NA	NA	False	NA	NA	NA	123416802	123467230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441350_123448046_123448225_123467078
transcript_138845.known	chr8	+	909	7	FSM	ENSG00000156795.8	ENST00000517609.5	909	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.1126489443369	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCGTACTTGCTAAGATATT	123415276	True	NA	52	True	CATAAA	-40	NA	123416791	123441623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_138851.known	chr8	+	3502	7	FSM	ENSG00000156795.8	ENST00000650311.1	3502	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	31.1001964981288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTGGTCCCCATGATGG	123415258	True	NA	NA	False	TATAAA	-12	NA	123416773	123470028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441350_123467078
transcript_138852.known	chr8	+	764	7	FSM	ENSG00000156795.8	ENST00000524254.5	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	28.8121309328014	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAGAAGAGCCACCATCAG	123415239	True	NA	NA	False	NA	NA	NA	123416754	123448091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305_123441498_123448046
transcript_138854.known	chr8	+	949	7	FSM	ENSG00000156795.8	ENST00000519199.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	32.2076595444831	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGTCAAATTGAAACTT	123415285	True	NA	25	True	TATAAA	-26	NA	123416800	123441596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123435441_123435543_123436452_123436602_123437209_123437335_123441305
transcript_138855.known	chr8	+	869	7	FSM	ENSG00000156795.8	ENST00000523356.1	869	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	36.0296945433748	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTAATTTGATTGAGT	123415297	True	NA	-47	True	NA	NA	NA	123416812	123441524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123438133_123438239_123441305
transcript_138859.known	chr8	+	1491	6	FSM	ENSG00000156795.8	ENST00000523984.5	1491	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	15.7480157480236	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	123415210	True	NA	NA	False	NA	NA	NA	123416725	123442240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416857_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_138864.known	chr8	+	1519	6	FSM	ENSG00000156795.8	ENST00000287387.7	1519	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	12.6491106406735	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGAACAACTTCTTATA	123415258	True	NA	NA	False	NA	NA	NA	123416773	123442240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982_123430034_123436452_123436602_123437209_123437335_123441305
transcript_13887.known	chr1	-	740	5	FSM	ENSG00000196550.11	ENST00000431655.2	740	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	143.706297704728	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGAATTATGATATATA	NA	False	NA	NA	False	NA	NA	NA	206202827	206187280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873_206202006_206202515
transcript_138874.known	chr8	+	341	3	FSM	ENSG00000156795.8	ENST00000522194.5	341	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCATTATGACTTGTAACCC	123415255	True	NA	NA	False	AATACA	-12	NA	123416770	123430061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_123416933_123427923_123428024_123429982
transcript_138875.known	chr8	-	9038	7	FSM	ENSG00000164983.8	ENST00000297632.8	9038	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	5.84997625826141	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAATGGTTATTTTACTTT	-124371854	True	NA	-15	True	AATAAA	-20	NA	124372701	124306188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124314062_124320085_124320192_124322104_124322148_124323320_124323376_124327353_124327422_124330747_124330793_124371853
transcript_138877.known	chr8	+	2207	1	FSM	ENSG00000183665.5	ENST00000328599.4	2207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	94	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTTAAGAATCACCAGT	124450405	True	NA	NA	False	TATAAA	-22	NA	124450819	124453026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124450800_124453000
transcript_138878.known	chr8	-	359	3	FSM	ENSG00000245149.5	ENST00000519861.2	569	3	210	0	164	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGCTTCAGTCTTTATT	-124474340	False	NA	NA	False	AATAAA	-32	NA	124474354	124472807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124472988_124474084_124474195_124474285
transcript_138879.known	chr8	-	1767	1	FSM	ENSG00000245149.5	ENST00000530778.1	1767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAATGCTTCAGTCTTTA	-124474483	True	NA	NA	False	AATAAA	-30	NA	124474576	124472809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124472800_124474600
transcript_138880.known	chr8	-	355	4	FSM	ENSG00000170873.19	ENST00000524243.5	355	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.54606056566195	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTATATGTTTGGTATGG	-124727984	False	NA	NA	False	AATAAA	-15	NA	124727998	124698038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124698143_124699525_124699600_124704129_124704192_124727883
transcript_138881.known	chr8	-	707	3	FSM	ENSG00000170873.19	ENST00000472084.2	707	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATTGGGTTGTATCTAT	-124728004	False	NA	NA	False	CATAAA	-26	NA	124728018	124699089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124699600_124704129_124704192_124727883
transcript_138908.known	chr8	-	889	10	FSM	ENSG00000147687.19	ENST00000519548.5	889	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	130.458545518358	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGTTGTCTAAAGAAAT	-124534293	True	NA	65	True	AATAAA	-10	NA	124539076	124488512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124539024
transcript_138924.known	chr8	+	636	4	FSM	ENSG00000147684.10	ENST00000517367.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1384.67428982013	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGTATGACTGACGTTC	124524492	True	NA	16	True	AATAAA	-17	NA	124539143	124549978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124539288_124543119_124543280_124546999_124547114_124549760
transcript_138928.known	chr8	-	690	7	FSM	ENSG00000147687.19	ENST00000520938.3	690	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	156.248111099694	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAGTTAAAACCAAAGTCT	-124534305	True	NA	NA	False	NA	NA	NA	124539088	124508602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124508689_124515745_124515789_124515886_124516031_124518741_124518882_124522150_124522201_124522936_124523003_124538927
transcript_138930.known	chr8	+	3199	2	FSM	ENSG00000170881.5	ENST00000303545.4	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTATTGTTATATAGTGT	124473383	True	NA	NA	False	NA	NA	NA	124474879	124488618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124475291_124485830
transcript_138935.known	chr8	-	1029	12	FSM	ENSG00000147687.19	ENST00000276692.11	1029	12	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_11	48.2791469793932	5376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATACTATATATCGGTAC	-124534302	True	NA	80	True	AATAAA	-25	NA	124539085	124488497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_138936.known	chr8	-	915	10	FSM	ENSG00000147687.19	ENST00000630259.1	915	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_8	130.809540181399	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAATACTATATATCGG	-124534305	True	NA	77	True	AATAAA	-22	NA	124539088	124488500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124522936_124523003_124539024
transcript_138937.known	chr8	-	990	13	FSM	ENSG00000147687.19	ENST00000522810.5	990	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	145.998929790598	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATACTATTAAAGTATT	-124534287	True	NA	-52	True	AATACA	-7	NA	124539070	124488629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124488697_124493832_124493960_124495471_124495543_124503839_124503952_124504274_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_138938.known	chr8	-	677	9	FSM	ENSG00000147687.19	ENST00000519776.5	677	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	126.80638538733	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTGTTTTCAGAACT	-124534326	True	NA	NA	False	NA	NA	NA	124539109	124495471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124495543_124504270_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522936_124523003_124539024
transcript_138939.known	chr8	-	726	9	FSM	ENSG00000147687.19	ENST00000605953.5	726	9	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_8	55.8993235647803	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGTGTGTTTGCATTG	-124534299	True	NA	-23	True	ATTAAA	-1	NA	124539082	124504173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124504348_124508473_124508515_124508602_124508689_124515745_124515789_124515886_124516031_124518817_124518882_124522150_124522201_124522936_124523003_124539024
transcript_138940.known	chr8	+	1565	4	FSM	ENSG00000147684.10	ENST00000606244.2	1565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1416.68368617228	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCAGTCTTACCTTTGTT	124524449	True	NA	NA	False	AATAAA	-21	NA	124539100	124580648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124539288_124543086_124543280_124546999_124547114_124579577
transcript_138941.known	chr8	+	3288	3	FSM	ENSG00000147684.10	ENST00000677782.1	3288	3	0	0	0	0	multi-exon	FALSE	canonical	3	2966	junction_1	38.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTGGTATGACTGAC	124524516	True	NA	12	True	AATAAA	-13	NA	124539167	124549974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124539288_124543086_124543280_124546999
transcript_138942.known	chr8	+	1423	4	FSM	ENSG00000147684.10	ENST00000677950.1	1423	4	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	1261.20497937488	978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAAATACAGGACTTTTT	124524526	True	NA	NA	False	NA	NA	NA	124539177	124550768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124539288_124543088_124543280_124546999_124547114_124549760
transcript_138943.known	chr8	+	3278	3	FSM	ENSG00000180938.6	ENST00000319286.6	3278	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTATTGGAGAATTTGGGGG	124973102	True	NA	9	True	AATAAA	-20	NA	124973294	124979389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124973417_124975605_124975720_124976347
transcript_138944.known	chr8	-	412	2	FSM	ENSG00000253513.1	ENST00000523030.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCACAGGCGTTCACTTG	-124998165	True	NA	NA	False	AATAAA	-20	NA	124998198	124996984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_124997161_124997962
transcript_138945.known	chr8	+	1879	11	FSM	ENSG00000104549.12	ENST00000523430.5	1879	11	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	300.330634468081	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTCGTGTCTTTTTGTT	124981924	True	NA	10	True	AATAAA	-11	NA	124998496	125022281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124998606_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_138946.nnic	chr8	+	1914	11	NIC	ENSG00000104549.12	novel	2962	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	304.796719142447	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	124981932	True	NA	12	True	AATAAA	-13	NA	124998504	125022283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_124998647_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_138949.known	chr8	+	2962	11	FSM	ENSG00000104549.12	ENST00000265896.10	2962	11	0	0	0	0	multi-exon	FALSE	canonical	3	913	junction_1	46.8453839775063	925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCGTGTCTTTTTGTTTC	124981932	True	NA	12	True	AATAAA	-13	NA	124998504	125022283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_124999695_125003175_125003429_125005524_125005706_125007390_125007488_125008970_125009085_125009171_125009344_125011536_125011633_125018058_125018202_125018630_125018728_125020783_125020872_125021752
transcript_138954.known	chr8	+	1188	8	FSM	ENSG00000156831.8	ENST00000287437.8	1188	8	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	31.16185527997	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	125089906	True	NA	5	True	AATAAA	-17	NA	125091859	125367120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_138958.nic	chr8	+	1251	8	NIC	ENSG00000156831.8	novel	1188	8	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	42.8847530110216	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCCTCCCTGCATGCCTC	125089880	True	NA	5	True	AATAAA	-17	NA	125091833	125367120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_138964.known	chr8	+	1037	7	FSM	ENSG00000156831.8	ENST00000522563.5	1037	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	39.2031744746377	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGTGTTCTATAATG	125089916	True	NA	-40	True	AAAACA	-42	NA	125091869	125367075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711_125357819_125366767
transcript_13897.known	chr1	-	2364	4	FSM	ENSG00000196550.11	ENST00000367128.8	2364	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	86.9495383669299	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	206202839	206186178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201873
transcript_13898.known	chr1	-	1774	4	FSM	ENSG00000196550.11	ENST00000341209.9	1774	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	110.882320001382	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	206202446	206186255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206201993
transcript_138982.known	chr8	+	841	7	FSM	ENSG00000156831.8	ENST00000517532.5	841	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	45.4364635752192	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCGCATGATTGAGTC	125089890	True	NA	NA	False	AATAAA	-31	NA	125091843	125357771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102_125182257_125357218_125357320_125357711
transcript_13899.known	chr1	-	676	4	FSM	ENSG00000196550.11	ENST00000367129.6	676	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	114.076972065161	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGATTGAAGCCAGTGA	NA	False	NA	NA	False	NA	NA	NA	206204065	206187122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206187374_206195751_206195877_206199806_206199885_206203843
transcript_138993.known	chr8	+	1183	5	FSM	ENSG00000156831.8	ENST00000520866.5	1183	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	33.9521722427299	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTTAGTGGACATAA	125089890	True	NA	NA	False	AATAAA	-12	NA	125091843	125182796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_138995.known	chr8	+	787	5	FSM	ENSG00000156831.8	ENST00000523741.5	787	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.844062980705	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTCAACATGCTTTGCT	NA	False	NA	-99	True	ACTAAA	-9	NA	125091678	125182256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091901_125102013_125102147_125102316_125102488_125151170_125151278_125182102
transcript_138996.known	chr8	+	848	5	FSM	ENSG00000156831.8	ENST00000519010.5	848	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	59.5876455316033	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAGGGAAATTGGGAAAAC	125089890	True	NA	-49	True	NA	NA	NA	125091843	125182519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091901_125102050_125102147_125102316_125102488_125151170_125151278_125182102
transcript_138998.nic	chr8	+	805	5	ISM	ENSG00000156831.8	ENST00000517532.5	841	7	-10	175400	-10	-59	5prime_fragment	FALSE	canonical	3	16	junction_1	54.5819338242976	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTTGCGTTTTATTG	125089880	True	NA	16	True	TATAAA	-30	NA	125091833	125182371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170_125151278_125182102
transcript_1390.known	chr1	-	507	3	FSM	ENSG00000069812.11	ENST00000377836.8	507	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCAGATGTCCAGGCCC	-6419714	False	NA	47	True	NA	NA	NA	6419903	6412999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6413283_6419606_6419703_6419775
transcript_139012.known	chr8	+	592	4	FSM	ENSG00000156831.8	ENST00000523824.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.4944441975089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTCCTTATCCTTAATG	125089916	True	NA	NA	False	NA	NA	NA	125091869	125151369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125091959_125102013_125102147_125102316_125102488_125151170
transcript_139015.nic	chr8	+	665	4	ISM	ENSG00000156831.8	ENST00000522563.5	1037	7	-29	184704	-3	-59	5prime_fragment	FALSE	canonical	3	33	junction_1	53.2749680640188	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAAGTTGCGTTTTATTG	125089887	True	NA	16	True	TATAAA	-30	NA	125091840	125182371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_125091959_125102316_125102488_125151170_125151278_125182102
transcript_139022.known	chr8	-	4139	29	FSM	ENSG00000164961.16	ENST00000318410.12	4139	29	0	0	0	0	multi-exon	FALSE	canonical	2	179	junction_22	41.5632509138856	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGTCTCGCTTATGATTCA	-125087666	True	NA	-1	True	AGTAAA	-22	NA	125091792	125024259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_125024674_125028619_125028708_125032240_125032395_125037236_125037334_125038829_125038960_125039794_125039899_125043824_125043905_125043991_125044095_125044535_125044699_125047206_125047332_125049005_125049186_125050563_125050666_125055590_125055672_125056676_125056818_125057555_125057667_125059221_125059298_125059375_125059543_125061081_125061195_125063521_125063652_125067591_125067720_125073152_125073325_125074997_125075112_125076347_125076501_125078737_125078931_125081660_125081762_125082382_125082468_125083112_125083259_125083712_125084023_125091614
transcript_139026.known	chr8	+	3596	3	FSM	ENSG00000173334.4	ENST00000311922.4	3596	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	19	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTGGTGAATTTCTTT	125429161	True	NA	15	True	AATAAA	-15	NA	125430357	125438403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_125431263_125433316_125433610_125436005
transcript_139029.nnic	chr8	-	451	2	Intergenic	novelGene_68	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTGTGAATCTGCAGATT	NA	False	NA	NA	False	AATAAA	-23	NA	127312075	127311479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_-_127311690_127311834
transcript_139031.known	chr8	-	5488	2	FSM	ENSG00000168672.4	ENST00000304916.4	5488	2	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTTTTTTCCACTTGA	-126552092	True	NA	-6	True	AATAAA	-18	NA	126558478	126552442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_126557486_126558033
transcript_139037.known	chr8	+	3721	3	FSM	ENSG00000136997.21	ENST00000621592.8	3721	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	114	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGACTCCTAGAATAATC	127732692	True	NA	NA	False	AATAAA	-17	NA	127736230	127742951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127736624_127738247_127739020_127740395
transcript_139038.known	chr8	+	2150	3	FSM	ENSG00000136997.21	ENST00000524013.2	2150	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	227.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATTGTTTTTAGAAA	127732681	True	NA	-28	True	TTTAAA	-9	NA	127736219	127741372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127736624_127738250_127739020_127740395
transcript_139045.known	chr8	-	1095	3	FSM	ENSG00000249375.8	ENST00000672942.1	1095	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCTTCTTTTATTTT	NA	False	NA	NA	False	AGTAAA	-18	NA	127738987	127730156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_127730923_127733824_127733960_127738793
transcript_139049.known	chr8	+	1701	9	FSM	ENSG00000249859.13	ENST00000667305.1	1701	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	39.5719281814773	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792565	True	NA	38	True	ATTAAA	-18	NA	127794525	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128100979
transcript_139068.known	chr8	+	1410	7	FSM	ENSG00000249859.13	ENST00000665737.1	1410	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	24.7571538482651	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCCGTGGTCTTTCTTTA	127792598	True	NA	36	True	ATTAAA	-16	NA	127794558	128101254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_139072.known	chr8	+	1269	7	FSM	ENSG00000249859.13	ENST00000667714.1	1269	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	47.7240330790822	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGTGGTCTTTCTTTAT	127792714	False	NA	37	True	ATTAAA	-17	NA	127794674	128101255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_139081.known	chr8	+	1433	7	FSM	ENSG00000249859.13	ENST00000668123.1	1433	7	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_5	41.3820277683709	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCCGTGGTCTTTCTTTAT	127795461	True	NA	37	True	ATTAAA	-17	NA	127795807	128101255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128070159_128070273_128096520_128096655_128100979
transcript_139086.known	chr8	+	1321	6	FSM	ENSG00000249859.13	ENST00000670223.1	1321	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	35.4265437207752	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792576	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_139089.known	chr8	+	1275	6	FSM	ENSG00000249859.13	ENST00000653522.1	1275	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	32.6398529408452	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792566	True	NA	38	True	ATTAAA	-18	NA	127794526	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_13909.known	chr1	-	629	2	FSM	ENSG00000196550.11	ENST00000468509.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGACTGTAGAACCTCTTC	NA	False	NA	NA	False	AATAAA	-15	NA	206204093	206203179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206203559_206203843
transcript_139091.nic	chr8	+	1027	6	NIC	ENSG00000249859.13	novel	1206	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	41.6797312851223	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792573	True	NA	38	True	ATTAAA	-18	NA	127794533	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_127794735_127939507_127939677_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_139096.known	chr8	+	1330	6	FSM	ENSG00000249859.13	ENST00000663059.1	1330	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.2706809370441	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795452	True	NA	38	True	ATTAAA	-18	NA	127795798	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127939507_127939677_127989161_127989292_128096520_128096655_128100979
transcript_139097.nic	chr8	+	1321	6	NIC	ENSG00000249859.13	novel	1449	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	38.6522961801754	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795408	True	NA	38	True	ATTAAA	-18	NA	127795754	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_127796009_127890588_127890999_127989161_127989292_128070159_128070273_128096517_128096655_128100979
transcript_139098.known	chr8	+	1363	6	FSM	ENSG00000249859.13	ENST00000659625.1	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	46.3611906663321	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795455	True	NA	38	True	ATTAAA	-18	NA	127795801	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127989161_127989292_128070159_128070362_128096517_128096655_128100979
transcript_13910.known	chr1	+	3240	22	FSM	ENSG00000263528.8	ENST00000581977.7	3240	22	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_21	8.64990529878822	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGGCTCTCCCTGGGC	206469984	True	NA	20	True	AATAAA	-20	NA	206470475	206496889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493265_206493379_206493919_206493992_206496111
transcript_139101.known	chr8	+	1017	5	FSM	ENSG00000249859.13	ENST00000656880.1	1017	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	41.7874083905666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTAAGTGCCATCCTC	127792576	True	NA	NA	False	CATAAA	-30	NA	127794536	127996670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_127996560
transcript_139102.known	chr8	+	1152	5	FSM	ENSG00000249859.13	ENST00000662766.1	1152	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	43.8826560271823	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792576	True	NA	38	True	ATTAAA	-18	NA	127794536	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_139103.nic	chr8	+	914	5	FSM	ENSG00000249859.13	ENST00000690350.1	922	5	8	0	1	0	multi-exon	FALSE	canonical	2	7	junction_1	50.101771425769	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792573	True	NA	38	True	ATTAAA	-18	NA	127794533	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127939507_127939677_127989161_127989292_128096517_128096655_128100979
transcript_139107.nic	chr8	+	1612	5	NIC	ENSG00000249859.13	novel	1378	6	NA	NA	-2	0	intron_retention	FALSE	canonical	3	21	junction_1	45.9748572591585	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127795302	True	NA	38	True	ATTAAA	-18	NA	127795350	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_127796009_127890588_127890999_127989161_127989292_128096517_128096655_128100979
transcript_13911.known	chr1	+	2493	21	FSM	ENSG00000263528.8	ENST00000578328.6	2493	21	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_19	9.9674470151589	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGATGTCGCCAGCATTAC	206470003	True	NA	NA	False	NA	NA	NA	206470494	206496274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864_206474995_206476180_206476363_206476677_206476839_206477748_206477860_206478159_206478340_206478942_206479134_206479869_206479935_206480021_206480114_206480446_206480534_206484996_206485073_206485193_206485307_206487913_206487991_206490818_206490859_206491647_206491750_206493022_206493120_206493919_206493992_206496111
transcript_139111.known	chr8	+	897	4	FSM	ENSG00000249859.13	ENST00000667204.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.94392028877595	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGTTATATTTCTATCT	127792639	True	NA	NA	False	AATAAA	-22	NA	127794599	127932701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127795893_127796009_127890588_127890999_127932464
transcript_139112.known	chr8	+	1036	4	FSM	ENSG00000249859.13	ENST00000664139.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	6.68331255192114	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTATCTTATAATA	127792570	True	NA	NA	False	AATAAA	-29	NA	127794530	127932708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127795893_127796072_127890588_127890999_127932464
transcript_139116.known	chr8	+	861	3	FSM	ENSG00000249859.13	ENST00000664214.1	861	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	48	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTATCTTATAAT	127792566	True	NA	NA	False	AATAAA	-28	NA	127794526	127932707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127932464
transcript_139118.known	chr8	+	1516	3	FSM	ENSG00000249859.13	ENST00000669416.1	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTCTATCTTATAATACA	127793188	False	NA	NA	False	AATAAA	-31	NA	127795148	127932710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796009_127890588_127890999_127932464
transcript_139119.known	chr8	+	1546	3	FSM	ENSG00000249859.13	ENST00000661160.1	1546	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTCTATCTTATAATA	127793219	False	NA	NA	False	AATAAA	-29	NA	127795179	127932708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127796072_127890588_127890999_127932464
transcript_139121.known	chr8	+	1581	8	FSM	ENSG00000249859.13	ENST00000657289.1	1581	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	44.7113189339828	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	127792572	True	NA	38	True	ATTAAA	-18	NA	127794532	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588_127890999_127939507_127939677_127989161_127989292_128009589_128009719_128010317_128010445_128096517_128096655_128100979
transcript_139122.known	chr8	+	837	2	FSM	ENSG00000249859.13	ENST00000523427.2	837	2	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTTCTGTGTCCTTAAGA	127792606	True	NA	NA	False	TATAAA	-13	NA	127794566	127891257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_127794735_127890588
transcript_139123.known	chr8	+	963	6	ISM	ENSG00000249859.13	ENST00000523190.7	1466	8	33664	0	735	0	3prime_fragment	FALSE	canonical	2	11	junction_5	21.3410402745508	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTGGTCTTTCTTTATG	NA	False	NA	38	True	ATTAAA	-18	NA	128009613	128101256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_+_128009719_128010317_128010445_128070159_128070273_128096517_128096655_128099369_128099574_128100979
transcript_139126.nnic	chr8	-	1287	4	NNC	ENSG00000254275.6	novel	892	2	NA	NA	-52598	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.40870359029762	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAAAGGATGTGGGTCA	NA	False	NA	NA	False	NA	NA	NA	128617277	128559713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_128560549_128561069_128561127_128615101_128615251_128617031
transcript_13913.known	chr1	+	678	5	FSM	ENSG00000263528.8	ENST00000579827.6	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	9.28372231381357	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATGTTCACAGCAGCA	206470150	False	NA	3	True	ATTAAA	-17	NA	206470641	206475135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206470699_206471155_206471246_206473195_206473315_206474330_206474472_206474864
transcript_139130.nnic	chr8	+	1703	3	Antisense	novelGene_ENSG00000229140.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTATAAGCAGCAATGAG	NA	False	NA	NA	False	AATAAA	-24	NA	128614165	128777472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_128615258_128737981_128738275_128777154
transcript_139140.known	chr8	-	1902	14	FSM	ENSG00000153310.20	ENST00000519110.5	1902	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	344.202207667693	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-130016658	False	NA	-5	True	AATAAA	-22	NA	130016672	129841469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129970942_129970996_130016606
transcript_139144.known	chr8	-	2021	13	FSM	ENSG00000153310.20	ENST00000519540.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_12	234.86107004402	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATCAGCTTTCATT	NA	False	NA	-32	True	NA	NA	NA	129939872	129841496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129904498_129904586_129939607
transcript_139146.known	chr8	-	1817	13	FSM	ENSG00000153310.20	ENST00000517654.5	1817	13	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_11	325.834910482117	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-130015281	True	NA	-19	True	AATAAA	-8	NA	130016451	129841483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129970942_129970996_130016369
transcript_139153.known	chr8	-	3798	12	FSM	ENSG00000153310.20	ENST00000519824.6	3798	12	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_11	220.800609353573	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCACTCATTTGTTGACA	-129939814	False	NA	-5	True	AATAAA	-18	NA	129939832	129839592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129879388_129879472_129903311_129903351_129939607
transcript_139155.nic	chr8	-	1914	12	NIC	ENSG00000153310.20	novel	2196	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_9	256.259263085952	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-129926758	True	NA	-5	True	AATAAA	-22	NA	129939821	129841469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_139162.nic	chr8	-	1838	11	NIC	ENSG00000153310.20	novel	3798	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	371	junction_9	242.940239565207	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCTTGGTTTACTGAT	-129939814	False	NA	-5	True	AATAAA	-22	NA	129939832	129841469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129903311_129903351_129939607
transcript_139166.known	chr8	-	1700	11	FSM	ENSG00000153310.20	ENST00000522941.5	1700	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	355.158218263354	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGATAAAATAAAAATCAGCT	-129926683	True	NA	-38	True	NA	NA	NA	129939746	129841502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129871374_129871497_129903311_129903351_129904498_129904586_129939607
transcript_139169.known	chr8	-	1647	10	FSM	ENSG00000153310.20	ENST00000522250.5	1647	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	307.081281715846	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTAAGTGTGG	-129926631	True	NA	-19	True	AATAAA	-8	NA	129939694	129841483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129842206_129846803_129846875_129849242_129849370_129850834_129850915_129852161_129852279_129854265_129854344_129855610_129855748_129862228_129862335_129871374_129871497_129939607
transcript_13918.known	chr1	-	2011	15	FSM	ENSG00000143486.16	ENST00000271764.7	2011	15	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_6	19.8889775647575	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610250	True	NA	-6	True	AATAAA	-19	NA	206612465	206591641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_139181.known	chr8	-	507	2	FSM	ENSG00000153310.20	ENST00000518285.1	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCACACCTGTAATCC	-130016542	False	NA	NA	False	TTTAAA	-23	NA	130016556	129970675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_129970996_130016369
transcript_139182.nnic	chr8	+	941	3	Antisense	novelGene_ENSG00000155897.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATGTTGTGTGGTTCTTA	NA	False	NA	NA	False	ATTAAA	-5	NA	131039030	131089583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_131039611_131077120_131077233_131089334
transcript_139184.known	chr8	+	884	5	FSM	ENSG00000253507.6	ENST00000524275.5	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	1242.22391298831	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTTCATTGTGCTGGA	131306906	True	NA	NA	False	NA	NA	NA	131308544	131317632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_131308672_131310552_131310713_131312555_131312730_131315759_131315884_131317333
transcript_139187.nnic	chr8	+	790	4	NNC	ENSG00000253507.6	novel	1158	5	NA	NA	-47	-1695	at_least_one_novel_splicesite	FALSE	canonical	3	565	junction_1	1082.06726018097	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	16	True	AATAAA	-22	NA	131308497	131315811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_131308672_131310552_131310713_131312555_131312749_131315548
transcript_139189.nnic	chr8	+	1081	4	NIC	ENSG00000253507.6	novel	1158	5	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	3	565	junction_1	1090.04617639193	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTATTTGCCTGTTTATT	NA	False	NA	27	True	AATAAA	-20	NA	131308497	131317887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_131308672_131310552_131310713_131312555_131312749_131317333
transcript_139198.nnic	chr8	+	851	2	NIC	ENSG00000253507.6	novel	731	4	NA	NA	-59	-3	combination_of_known_splicesites	FALSE	canonical	3	80	junction_1	0	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATTTATTTGCCTGTTT	131308774	False	NA	24	True	AATAAA	-17	NA	131310412	131317884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_131310713_131317333
transcript_139207.nnic	chr8	-	1049	6	NNC	ENSG00000132297.13	novel	4188	17	NA	NA	-4563	-11442	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	56.0478367111524	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTCTCCTTTTTCATGT	-132085653	False	NA	NA	False	ATTAAA	-14	NA	132085667	132075226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_132075374_132076054_132076130_132076474_132076544_132077725_132077972_132079717_132079967_132085404
transcript_139210.nnic	chr8	+	711	4	Antisense	novelGene_ENSG00000132297.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGCAATATTTGTGT	132083361	True	NA	NA	False	AATAAA	-24	NA	132083428	132119040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_132083587_132109982_132110084_132110585_132110700_132118702
transcript_139212.known	chr8	-	2413	18	FSM	ENSG00000258417.3	ENST00000262283.5	2413	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	42.6896744482582	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAATAAATACTCCAATCAA	-132085571	True	NA	-25	True	NA	NA	NA	132085655	132024237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_132024777_132029072_132029180_132031880_132032053_132033038_132033165_132034780_132034835_132036370_132036419_132037437_132037489_132038789_132038832_132038994_132039124_132041043_132041157_132041524_132041700_132044432_132044490_132045817_132045884_132054980_132055074_132076054_132076130_132076474_132076544_132077725_132077972_132085404
transcript_139216.known	chr8	-	1736	12	FSM	ENSG00000129295.10	ENST00000519595.5	1736	12	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_1	3.64997452725177	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGTAAGATCATAGAACT	-132675340	True	NA	NA	False	AATAAA	-19	NA	132675592	132572069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_132572481_132583693_132583776_132610161_132610262_132611293_132611364_132615037_132615098_132622610_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_13922.nnic	chr1	-	1947	14	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-86	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_5	50.435851811276	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	NA	False	NA	-6	True	AATAAA	-19	NA	206612551	206591641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599732_206599837_206600262_206600309_206602335_206602454_206602950_206603205_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_139227.nic	chr8	-	1076	7	ISM	ENSG00000129295.10	ENST00000250173.5	1672	13	-60	50374	-27	2697	5prime_fragment	FALSE	canonical	3	14	junction_4	2.62466929133727	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCAGTCAATGGTGTTGG	-132675367	False	NA	NA	False	AATAGA	-18	NA	132675619	132622574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_132622689_132625271_132625455_132632739_132632964_132637934_132638108_132656829_132656908_132661459_132661628_132675483
transcript_139237.nnic	chr8	+	355	2	Intergenic	novelGene_69	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGCTCACTATAAAGATTC	NA	False	NA	NA	False	AATGAA	-18	NA	132675617	132676058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr8_+_132675806_132675891
transcript_13924.known	chr1	-	1633	13	FSM	ENSG00000143486.16	ENST00000367114.7	1633	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	60.2385881308651	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610244	True	NA	-6	True	AATAAA	-19	NA	206612459	206591641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206605399_206605508_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_139243.nic	chr8	-	2444	4	ISM	ENSG00000155926.14	ENST00000427060.6	1914	7	12360	-911	-7657	0	3prime_fragment	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGGGAGAGTTTCTGGGT	-133047908	True	NA	1	True	AATAAA	-17	NA	133047998	133036727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_133038738_133039997_133040131_133044983_133045116_133047829
transcript_139245.known	chr8	-	3025	16	FSM	ENSG00000104419.17	ENST00000323851.13	3025	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.74610678049451	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTTGTGTCTTTTTTCT	-133297220	True	NA	-4	True	AATAAA	-15	NA	133297252	133237174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_133239120_133242022_133242075_133244354_133244391_133246615_133246664_133247874_133247927_133248714_133248772_133250439_133250544_133254538_133254596_133256776_133256864_133258365_133258427_133259167_133259231_133262046_133262168_133264546_133264653_133280231_133280268_133284248_133284330_133297133
transcript_139246.known	chr8	+	1102	1	FSM	ENSG00000225259.4	ENST00000522430.1	1102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAATGCCCTTCTGAT	NA	False	NA	NA	False	AGTAAA	-23	NA	133408005	133409107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_133408000_133409100
transcript_139247.known	chr8	-	393	2	FSM	ENSG00000008513.16	ENST00000522285.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTCCACATGGTTCTG	-133571729	False	NA	NA	False	AATAAA	-24	NA	133571746	133566981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_133567321_133571692
transcript_139250.known	chr8	+	679	1	FSM	ENSG00000261220.2	ENST00000561761.2	679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTTTATTGTATGGAT	133573015	False	NA	NA	False	AATAAA	-25	NA	133573182	133573861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_133573200_133573900
transcript_139251.known	chr8	+	1978	9	FSM	ENSG00000131773.14	ENST00000355849.10	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	9.27024810886958	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGTGTGAGCTAAC	135456212	True	NA	14	True	AATAAA	-14	NA	135457455	135647610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_135457955_135521236_135521356_135542653_135542771_135548753_135548901_135557447_135557588_135581877_135582074_135606954_135607038_135645058_135645118_135646992
transcript_139254.known	chr8	+	453	3	FSM	ENSG00000253574.5	ENST00000518354.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGCCAATTTTCATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	139911237	139916620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_139911301_139913924_139914092_139916397
transcript_139255.known	chr8	+	2481	3	FSM	ENSG00000104472.10	ENST00000220913.10	2481	3	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	7.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGTTTGGTGGCCTGTC	140507515	True	NA	8	True	ATTAAA	-23	NA	140511321	140517154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_140511647_140514368_140514496_140515125
transcript_139257.known	chr8	+	811	3	FSM	ENSG00000104472.10	ENST00000519618.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	120	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAAAGATCTGTACATA	140511832	True	NA	NA	False	AATATA	-6	NA	140511981	140515765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_140512026_140514368_140514496_140515125
transcript_139260.known	chr8	+	1678	2	FSM	ENSG00000104472.10	ENST00000519533.1	1678	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATGAAAAAGTTTATAA	140507504	True	NA	NA	False	NA	NA	NA	140511310	140516467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_140511647_140515125
transcript_139275.known	chr8	-	571	4	FSM	ENSG00000169398.19	ENST00000520892.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	177.994381933813	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTTGATTTCTTTTGCTT	-141000903	False	NA	NA	False	NA	NA	NA	141000937	140879440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140879638_140890542_140890770_140925660_140925750_141000879
transcript_139276.nic	chr8	-	920	4	ISM	ENSG00000169398.19	ENST00000395218.3	4415	31	61	220780	8	0	5prime_fragment	FALSE	canonical	3	187	junction_3	118.502695703047	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-140993208	True	NA	-1	True	AATAAA	-17	NA	141001252	140879161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_140879638_140890542_140890770_140925660_140925750_141001124
transcript_139277.known	chr8	-	602	4	FSM	ENSG00000169398.19	ENST00000520045.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	185.735175870258	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAGTGGAAGTAAGATAC	-140993241	True	NA	NA	False	NA	NA	NA	141001285	140879481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140879638_140890542_140890770_140948665_140948724_141001124
transcript_139282.known	chr8	-	863	3	FSM	ENSG00000169398.19	ENST00000519881.5	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_2	98	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATGTATA	-140993240	True	NA	-1	True	AATAAA	-17	NA	141001284	140879161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_140879638_140890542_140890770_141001124
transcript_139286.nnic	chr8	-	790	3	NNC	ENSG00000253210.3	novel	776	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATGGGGACGCTGCAGG	-141128158	True	NA	-9	True	AATAAA	-14	NA	141128310	141125944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_141126472_141127538_141127558_141128066
transcript_139288.known	chr8	-	483	2	FSM	ENSG00000253210.3	ENST00000520885.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCGAGCACAGCATTGTG	-141127969	False	NA	-108	True	TATAAA	-25	NA	141128121	141126043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_141126472_141128066
transcript_139289.nnic	chr8	+	622	2	Antisense	novelGene_ENSG00000022567.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCGGCTCATCTGGCTA	141221495	True	NA	NA	False	AATAAA	-13	NA	141221520	141223003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr8_+_141221738_141222598
transcript_139297.known	chr8	+	2849	6	FSM	ENSG00000184489.13	ENST00000521578.6	2849	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	41.4805978741869	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGCTGTATTTTTTCAAT	141390590	True	NA	8	True	AGTAAA	-21	NA	141392020	141432454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141427749_141427825_141430926
transcript_139303.known	chr8	+	1866	5	FSM	ENSG00000184489.13	ENST00000520105.5	1866	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	89.9235786654424	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTGTGGAGTGGGC	141390564	True	NA	18	True	AATAAA	-13	NA	141391994	141431520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_141392085_141421387_141422346_141425047_141425141_141426938_141427070_141430926
transcript_13931.nnic	chr1	-	1536	12	NIC	ENSG00000143486.16	novel	2011	15	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_8	62.9147396307886	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGACTTCCCTCTTGTTTC	-206610255	True	NA	-6	True	AATAAA	-19	NA	206612470	206591641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_206591846_206593618_206593794_206595717_206595839_206597099_206597196_206599002_206599093_206599462_206599613_206599732_206599837_206600262_206600309_206608235_206608327_206609375_206609460_206611183_206611375_206612286
transcript_139315.known	chr8	-	589	4	FSM	ENSG00000171045.16	ENST00000520462.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.0213499897497	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTGAAGGCCGAGCCC	-142402828	False	1046	NA	False	NA	NA	NA	142402888	142344259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142344473_142345742_142345893_142354636_142354764_142402789
transcript_139316.known	chr8	-	2950	3	FSM	ENSG00000198576.4	ENST00000356613.4	2950	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	6.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGTGTTCATGTTGTTT	-142614098	True	NA	-10	True	AATAAA	-14	NA	142614479	142611048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142611858_142612107_142612253_142612483
transcript_139317.known	chr8	+	735	3	FSM	ENSG00000167653.5	ENST00000510969.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCTCCAGGACTCCC	NA	False	NA	NA	False	NA	NA	NA	142670320	142682299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_142670569_142681326_142681435_142681920
transcript_139318.nnic	chr8	-	828	3	NIC	ENSG00000234616.9	novel	2823	4	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	4	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGCCTCAGGTGTTA	-142667965	True	NA	NA	False	AATAAA	-18	NA	142670018	142657462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_142658081_142658821_142658945_142669931
transcript_139319.known	chr8	+	2671	3	FSM	ENSG00000160886.13	ENST00000292430.10	2671	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTGATTTCTTTGAGGC	NA	False	NA	NA	False	NA	NA	NA	142700110	142705127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_142700631_142701599_142701714_142703090
transcript_139322.known	chr8	-	639	4	FSM	ENSG00000180155.20	ENST00000613110.4	639	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	3.55902608401044	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCAGTACGACCTCTG	-142777289	False	NA	NA	False	NA	NA	NA	142777328	142775265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142775364_142775592_142775695_142775905_142776122_142777105
transcript_139325.known	chr8	+	740	5	FSM	ENSG00000160932.11	ENST00000521003.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	560.567290786753	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCCAGGTCAGGCCCACCC	143003150	True	NA	NA	False	NA	NA	NA	143018528	143021902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020261_143020378_143020882_143020992_143021313_143021434_143021565
transcript_139326.known	chr8	+	635	5	FSM	ENSG00000160932.11	ENST00000519611.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	509.556915368637	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCCGATCCCCCAGC	143003165	True	NA	NA	False	NA	NA	NA	143018543	143021800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020261_143020378_143020887_143020992_143021313_143021434_143021548
transcript_139327.known	chr8	+	868	5	FSM	ENSG00000160932.11	ENST00000522024.1	868	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	563.292552764547	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCTTGGTCCCAGGTC	143003178	True	NA	NA	False	NA	NA	NA	143018556	143021892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143018832_143019120_143020887_143020992_143021313_143021434_143021565
transcript_139329.known	chr8	+	857	4	FSM	ENSG00000160932.11	ENST00000522971.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	531.216423775554	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGGGGAGGGAGGT	143003163	True	NA	NA	False	NA	NA	NA	143018541	143022182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020916_143020992_143021313_143021434_143021565
transcript_139334.known	chr8	-	995	2	FSM	ENSG00000247317.4	ENST00000517833.2	1036	2	41	0	7	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATAAAGGTGAAATAAAT	NA	False	NA	NA	False	NA	NA	NA	143018390	142981737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_142982502_143018159
transcript_139335.known	chr8	+	427	4	FSM	ENSG00000160932.11	ENST00000523847.5	427	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	494.590290599761	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAACTTGCGCTTCCATCT	143003174	True	NA	5	True	NA	NA	NA	143018552	143023832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143023668
transcript_139336.known	chr8	+	1079	4	FSM	ENSG00000160932.11	ENST00000521182.5	1079	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	450.271276257127	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTGCTCTGAGTGTGG	143003167	True	NA	31	True	AATAAA	-16	NA	143018545	143022409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020882_143020992_143021348_143021434_143021565
transcript_139337.known	chr8	+	971	4	FSM	ENSG00000160932.11	ENST00000519546.5	971	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	490.072103538517	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGCACTTCAAGGGCAG	143003173	True	NA	NA	False	NA	NA	NA	143018551	143022255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143018587_143020882_143020992_143021313_143021434_143021548
transcript_139338.known	chr8	+	1554	6	FSM	ENSG00000177335.12	ENST00000517653.5	1554	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.4	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCTCATGGGAAGCCTT	NA	False	NA	NA	False	NA	NA	NA	143039208	143053938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143039570_143043177_143043263_143044648_143044818_143047678_143047815_143049208_143049299_143053225
transcript_139344.known	chr8	+	1300	4	FSM	ENSG00000261667.2	ENST00000562505.2	1300	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.942809041582063	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTCATTCCTTCCTTC	143080605	True	NA	3	True	AATAAA	-15	NA	143080629	143083486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143080660_143081035_143081127_143081210_143081328_143082424
transcript_139346.known	chr8	-	925	4	FSM	ENSG00000176956.13	ENST00000430474.6	925	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGGTCTGAGCCTGGGTG	-143160024	False	NA	NA	False	AATAAA	-21	NA	143160040	143157913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143158486_143158802_143158923_143159581_143159710_143159935
transcript_139347.known	chr8	+	1082	4	FSM	ENSG00000250571.7	ENST00000521682.5	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	19.1891172861657	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTCCCATCCACTGGGT	143266510	True	NA	NA	False	NA	NA	NA	143267436	143275751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143267485_143269359_143269521_143274703_143274803_143274977
transcript_139348.known	chr8	+	4786	3	FSM	ENSG00000181638.20	ENST00000330701.7	4786	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTCTTCATTGAGCTC	143245930	True	NA	10	True	AGTAAA	-19	NA	143246938	143262705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143247143_143249689_143251341_143259774
transcript_139354.known	chr8	-	660	3	FSM	ENSG00000253716.7	ENST00000517411.3	684	3	21	3	-5	0	multi-exon	FALSE	canonical	3	16	junction_1	14.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-143280714	True	NA	-12	True	AATAAA	-20	NA	143281670	143280160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280516_143280881_143280998_143281481
transcript_139356.known	chr8	-	328	2	FSM	ENSG00000253716.7	ENST00000519852.5	328	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-143281110	False	NA	-14	True	ATTAAA	-16	NA	143281250	143280827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280998_143281092
transcript_139359.known	chr8	-	379	2	FSM	ENSG00000253716.7	ENST00000518073.2	1048	2	2	667	1	0	multi-exon	FALSE	canonical	3	45	junction_1	0	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAGGTTGGAGAATCAA	-143280734	True	NA	-14	True	ATTAAA	-16	NA	143281690	143280827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280998_143281481
transcript_139360.known	chr8	-	1527	1	FSM	ENSG00000253716.7	ENST00000671046.1	1527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTCCAAACTTAAGCTCAT	-143280731	True	NA	-12	True	AATAAA	-20	NA	143281687	143280160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143280200_143281700
transcript_139362.known	chr8	-	1942	14	FSM	ENSG00000184428.13	ENST00000329245.9	1942	14	0	0	0	0	multi-exon	TRUE	canonical	3	267	junction_13	26.3512909084997	633	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCCAGGCCGGCCGGGCA	-143328067	True	NA	-3	True	AATAAA	-34	NA	143334880	143309323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143309544_143310067_143310218_143315726_143315822_143315998_143316127_143317722_143317838_143318017_143318087_143321200_143321387_143323998_143324143_143324484_143324630_143325345_143325534_143326221_143326345_143329349_143329472_143331223_143331340_143334739
transcript_139366.known	chr8	-	1918	1	FSM	ENSG00000254389.3	ENST00000518049.1	1918	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGAGATGGAGTCTTG	-143368346	True	NA	-7	True	NA	NA	NA	143368548	143366630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143366600_143368500
transcript_139367.known	chr8	+	417	2	FSM	ENSG00000254338.1	ENST00000519762.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTGTTCCTTCAGCTCT	143417318	False	NA	12	True	ATTAAA	-21	NA	143417678	143419150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143417920_143418974
transcript_139368.known	chr8	-	3270	12	FSM	ENSG00000014164.7	ENST00000262577.6	3270	12	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_2	28.0975279051408	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	-143538677	True	NA	-5	True	AATAAA	-15	NA	143541447	143437658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143438088_143440040_143440364_143440935_143441121_143465716_143465849_143468208_143468279_143468381_143468541_143468616_143468660_143475397_143475586_143507745_143507900_143536256_143536454_143538002_143539321_143541375
transcript_13937.known	chr1	+	8128	3	FSM	ENSG00000143479.18	ENST00000367109.8	8128	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTAGCATCCTGATTGT	206634838	True	NA	17	True	AATAAA	-19	NA	206635535	206655158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206635781_206637649_206637762_206647387
transcript_139373.nnic	chr8	-	788	4	NNC	ENSG00000014164.7	novel	3270	12	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	143.204593346567	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTTGGCTTGTCCTGACT	-143538688	True	NA	-5	True	AATAAA	-15	NA	143541458	143437658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_143438088_143440040_143440212_143539215_143539321_143541375
transcript_139374.known	chr8	+	2496	14	FSM	ENSG00000104518.11	ENST00000526406.5	2496	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	57.2099838185671	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	NA	False	NA	19	True	AATAAA	-19	NA	143553206	143563062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143553761_143555058_143555197_143555933_143556031_143558361_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_139379.known	chr8	+	1723	11	FSM	ENSG00000104518.11	ENST00000262580.9	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	11.8932754109202	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGGTAGCAGAGTTTTTG	143558276	False	NA	19	True	AATAAA	-19	NA	143558345	143563062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143558452_143559331_143559553_143559776_143559970_143560602_143560772_143561001_143561105_143561369_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_139388.known	chr8	+	2213	9	FSM	ENSG00000104518.11	ENST00000531184.5	2213	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	13.228756555323	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAAGGCTGGTAGCAGA	143558268	False	NA	12	True	AATAAA	-12	NA	143558337	143563055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143558452_143559331_143559970_143560602_143560772_143561001_143561424_143561741_143561829_143561958_143562132_143562208_143562351_143562447_143562522_143562661
transcript_13939.nic	chr1	-	1130	2	FSM	ENSG00000237605.3	ENST00000688109.1	1138	2	-7	15	-7	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTTTTTAAAGTTTA	-206635349	False	NA	NA	False	AATAAA	-15	NA	206635440	206634198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_206634984_206635095
transcript_139394.known	chr8	-	2350	10	FSM	ENSG00000104529.19	ENST00000618139.4	2090	10	-260	0	4	0	multi-exon	FALSE	canonical	3	20	junction_9	1800.376071825	3450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	NA	False	NA	-34	True	ATTAAA	-14	NA	143597675	143579727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143588990_143590082_143592646_143592661_143597347
transcript_139399.known	chr8	-	1118	9	FSM	ENSG00000104529.19	ENST00000534380.6	1118	9	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	1673.36210497758	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578553	True	NA	-42	True	ATTAAA	-6	NA	143597362	143579735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586850_143593874_143594072_143597347
transcript_13940.known	chr1	+	2218	4	FSM	ENSG00000143479.18	ENST00000367108.7	2218	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.49691252107735	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTGTTATTATCGTCAGA	206634881	True	NA	14	True	ATTAAA	-23	NA	206635578	206649197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206635781_206636874_206636969_206637649_206637762_206647387
transcript_139407.known	chr8	-	1143	9	FSM	ENSG00000104529.19	ENST00000530191.6	1143	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1675.8930781452	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578593	True	NA	-42	True	ATTAAA	-6	NA	143597402	143579735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143593892_143594072_143597347
transcript_13941.known	chr1	+	3091	10	FSM	ENSG00000162889.11	ENST00000367103.4	3091	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2.86744175568088	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGAGTTTTTCTTTCTCTTT	206682888	True	NA	21	True	ACTAAA	-15	NA	206684904	206734281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_206685509_206728709_206728850_206729034_206729100_206729395_206729476_206729971_206730099_206730687_206730764_206731137_206731263_206731639_206731726_206731838_206731920_206732574
transcript_13942.known	chr1	-	5501	4	FSM	ENSG00000182795.13	ENST00000359470.6	5501	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1.69967317119759	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGTCTTATTTTTTT	-207032601	True	NA	-1	True	AATAAA	-13	NA	207032756	207018521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_207023481_207024886_207025065_207027493_207027680_207032578
transcript_13943.known	chr1	-	3142	3	FSM	ENSG00000182795.13	ENST00000461135.2	3142	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTATTGCTGTGGCTTTT	-207032601	True	NA	-1	True	ATTAAA	-16	NA	207032756	207020694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_207023481_207024886_207025065_207032578
transcript_139433.known	chr8	-	2678	6	FSM	ENSG00000104524.14	ENST00000220966.10	2678	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	5.38144961882948	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGAAGGTC	-143599158	False	NA	NA	False	NA	NA	NA	143609614	143603912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143605883_143606061_143606155_143606466_143606680_143606952_143607133_143608061_143608127_143609457
transcript_139444.known	chr8	-	533	3	FSM	ENSG00000104529.19	ENST00000530109.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	4144	junction_1	100.5	3152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143580717	False	NA	-34	True	ATTAAA	-14	NA	143580740	143579727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505
transcript_139445.known	chr8	-	886	7	FSM	ENSG00000104529.19	ENST00000534377.6	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_6	1616.21316663366	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578590	True	NA	-42	True	ATTAAA	-6	NA	143597399	143579735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586728_143586850_143597347
transcript_139446.known	chr8	-	840	7	FSM	ENSG00000104529.19	ENST00000531621.5	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1664.47376568892	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	-143578591	True	NA	-35	True	ATTAAA	-13	NA	143597400	143579728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586728_143586853_143597347
transcript_139447.known	chr8	-	861	8	FSM	ENSG00000104529.19	ENST00000529007.5	861	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1332.6258565214	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGGCTCCGTCCTGGT	-143578578	True	NA	-35	True	ATTAAA	-13	NA	143597387	143579728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143597347
transcript_139448.known	chr8	-	831	7	FSM	ENSG00000104529.19	ENST00000533833.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	1699.79849295929	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGGCTCCGTCCTGGTC	-143578619	True	NA	-34	True	ATTAAA	-14	NA	143597428	143579727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580633_143581053_143581155_143581228_143581329_143586728_143586853_143597347
transcript_139449.known	chr8	-	419	4	FSM	ENSG00000104529.19	ENST00000532400.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1750.17161063327	2606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTCCTGGTCATTTCC	-143578587	True	NA	-28	True	ATTAAA	-20	NA	143597396	143579721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580174_143586753_143586853_143597347
transcript_13945.known	chr1	+	3494	15	FSM	ENSG00000123836.15	ENST00000367079.3	3494	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_14	10.1219603650999	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCAATTAATTTTTAAG	207051550	True	NA	NA	False	AATAAA	-16	NA	207053310	207081024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207053367_207054700_207054803_207061952_207062079_207062619_207062717_207063142_207063210_207063346_207063422_207063772_207063830_207065035_207065161_207067498_207067707_207068162_207068310_207069423_207069529_207070279_207070410_207071187_207071251_207071508_207071574_207078953
transcript_139450.known	chr8	-	899	8	FSM	ENSG00000104529.19	ENST00000529516.6	899	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	1557.08931755925	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578588	True	NA	-42	True	ATTAAA	-6	NA	143597397	143579735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581285_143581329_143586218_143586291_143586728_143586850_143597347
transcript_139451.known	chr8	-	1155	9	FSM	ENSG00000104529.19	ENST00000533494.6	1155	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1677.36735690188	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGACCGGCCCTCTGGCTCCG	-143578556	True	NA	-42	True	ATTAAA	-6	NA	143597365	143579735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143579831_143580011_143580207_143580505_143580728_143581053_143581155_143581228_143581329_143586218_143586291_143586728_143586853_143592714_143592943_143597347
transcript_139455.known	chr8	-	1324	11	FSM	ENSG00000104522.16	ENST00000529064.5	1324	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_10	200.976142862779	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607026	True	NA	-11	True	AATAAA	-17	NA	143617482	143612617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617427
transcript_139458.known	chr8	-	1345	11	FSM	ENSG00000104522.16	ENST00000425753.7	1345	11	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_10	91.1757094844893	2402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	NA	False	NA	-11	True	AATAAA	-17	NA	143617549	143612617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614454_143614623_143614698_143614786_143614916_143616105_143616221_143616566_143616724_143617473
transcript_139459.known	chr8	-	2220	9	FSM	ENSG00000104522.16	ENST00000531473.5	2220	9	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_3	51.9974458507339	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGGCAGCTCTGTG	-143607048	True	NA	-11	True	AATAAA	-17	NA	143617504	143612617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143612966_143613195_143613296_143613523_143613604_143613750_143613818_143614163_143614229_143614319_143614698_143614786_143614916_143616105_143616221_143616566
transcript_13946.known	chr1	-	6396	2	FSM	ENSG00000180667.11	ENST00000315927.9	6396	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAGTATATTTTGGGA	-207051181	False	NA	-2	True	AATAAA	-15	NA	207051208	207043848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_207049724_207050687
transcript_139460.nnic	chr8	+	513	2	NNC	ENSG00000183309.12	novel	3960	2	NA	NA	-7	-11419	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGCAGCA	143634338	True	NA	NA	False	TTTAAA	-14	NA	143636011	143640957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_143636146_143640578
transcript_139461.known	chr8	+	3960	2	FSM	ENSG00000183309.12	ENST00000526926.6	3960	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGTTTCAGTAGTTC	143634345	True	NA	NA	False	NA	NA	NA	143636018	143653730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143636146_143649897
transcript_139462.known	chr8	+	525	5	FSM	ENSG00000181135.16	ENST00000530574.5	525	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.81534007106456	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAGGACAGACGCCAAGC	143683297	True	NA	NA	False	NA	NA	NA	143684472	143693827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691200_143691609_143691714_143693670
transcript_139463.known	chr8	+	2114	5	FSM	ENSG00000181135.16	ENST00000533031.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.64005494464026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGCCGTGTTTCAGGTT	143683280	True	NA	-19	True	NA	NA	NA	143684455	143695356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056_143690124_143691072_143691233_143691599_143691714_143693670
transcript_139464.known	chr8	+	444	2	FSM	ENSG00000181135.16	ENST00000525619.5	444	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAGCTGGGCACGCACCT	143683286	True	NA	NA	False	AATACA	-4	NA	143684461	143690419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143690056
transcript_139465.known	chr8	+	2185	6	FSM	ENSG00000181135.16	ENST00000358656.9	2185	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.57820925690384	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGCTTTTGCCTGTTTT	143683303	True	NA	10	True	NA	NA	NA	143684478	143695385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143684543_143689203_143689302_143690056_143690124_143691072_143691200_143691599_143691714_143693670
transcript_139467.known	chr8	+	1871	14	FSM	ENSG00000181085.15	ENST00000338033.9	1871	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	6.7893058964973	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAAGCAGCCATCGTTCCT	143716096	True	NA	8	True	AATAAA	-18	NA	143716348	143722458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143716444_143717693_143717793_143718046_143718077_143718211_143718303_143718774_143718906_143718992_143719157_143719342_143719483_143720229_143720288_143720702_143720841_143720999_143721106_143721230_143721412_143721548_143721674_143721751_143721881_143722074
transcript_13948.known	chr1	+	339	2	FSM	ENSG00000123836.15	ENST00000468857.1	339	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAAGTAGACTTAGTGA	207051522	True	NA	NA	False	NA	NA	NA	207053282	207054955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207053367_207054700
transcript_139481.known	chr8	-	1842	12	FSM	ENSG00000179950.14	ENST00000453551.6	1842	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	621.597767952851	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828971	False	20809	-28	True	GATAAA	-25	NA	143829026	143816376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_139485.known	chr8	-	1736	11	FSM	ENSG00000179950.14	ENST00000456095.6	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_10	613.889371141088	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143829248	False	NA	-28	True	GATAAA	-25	NA	143829303	143816376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143829279
transcript_139488.known	chr8	-	1804	11	FSM	ENSG00000179950.14	ENST00000313352.11	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	588.825959006564	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143828984	False	20809	-28	True	GATAAA	-25	NA	143829039	143816376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143828983
transcript_139489.known	chr8	-	1559	10	FSM	ENSG00000179950.14	ENST00000527197.5	1559	10	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_9	576.261514707805	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGGTCCCTCTCCCCGGA	-143808511	True	NA	NA	False	NA	NA	NA	143829320	143816519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143829279
transcript_13949.known	chr1	+	1691	10	FSM	ENSG00000196352.17	ENST00000367063.6	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	27.446018848228	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTGATATATTGGTTT	207321455	True	NA	6	True	AATAAA	-17	NA	207321531	207340766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207340390
transcript_139494.known	chr8	-	1821	11	FSM	ENSG00000179950.14	ENST00000349157.10	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	1020	junction_7	364.01565900384	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCCGTGTGTCTGCCGTCG	-143808543	True	NA	-28	True	GATAAA	-25	NA	143829352	143816376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_139495.known	chr8	-	1868	12	FSM	ENSG00000179950.14	ENST00000526683.6	1868	12	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_7	456.237650121545	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGGCGTGTGTCCTTAG	-143808506	True	NA	5	True	NA	NA	NA	143829315	143816343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143816820_143816909_143817146_143817330_143817467_143817591_143817783_143817861_143818076_143818192_143818286_143818372_143818535_143820665_143820717_143821596_143821687_143821817_143821914_143824312_143824400_143829279
transcript_139497.known	chr8	+	2674	2	FSM	ENSG00000287222.1	ENST00000654408.1	2674	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATACTTTTGTCTCTGTG	143829340	True	NA	NA	False	NA	NA	NA	143829517	143832861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143830039_143830708
transcript_139498.known	chr8	+	1858	7	FSM	ENSG00000178719.17	ENST00000395068.9	1858	7	0	0	0	0	multi-exon	TRUE	canonical	3	313	junction_2	46.639575469766	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCCTGGTCACTCTTCT	143985462	True	NA	18	True	AATAAA	-18	NA	143990055	143993415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_143990200_143991199_143991603_143991691_143991805_143991877_143992079_143992244_143992374_143992464_143992609_143992691
transcript_139499.known	chr8	-	3505	11	FSM	ENSG00000178685.14	ENST00000313028.12	3505	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.63868107973205	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTGCGACCTCTGTT	-143986434	True	NA	-5	True	AATAAA	-36	NA	143986460	143977157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_143977831_143977906_143978082_143982931_143983066_143983166_143983812_143984007_143984105_143984209_143984432_143984543_143985329_143985411_143985649_143985720_143985976_143986054_143986234_143986357
transcript_13950.known	chr1	+	2590	10	FSM	ENSG00000196352.17	ENST00000367064.9	2590	10	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.4680584118346	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGTTATCACAACTAGC	207320037	True	NA	NA	False	AATAAA	-19	NA	207321677	207360966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207321866_207322381_207322568_207324558_207324751_207325621_207325722_207326751_207326838_207331107_207331297_207336692_207336819_207337328_207337410_207339396_207339418_207359545
transcript_139504.nic	chr8	+	871	3	FSM	ENSG00000204791.11	ENST00000686861.1	869	3	-2	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	144050506	False	NA	9	True	ATTAAA	-16	NA	144050526	144051646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144050629_144050794_144050859_144050941
transcript_139505.nic	chr8	+	862	3	NIC	ENSG00000204791.11	novel	1374	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	5	junction_2	5.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	144050506	False	NA	9	True	ATTAAA	-16	NA	144050526	144051646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144050629_144050794_144051022_144051113
transcript_139510.nic	chr8	+	1293	2	FSM	ENSG00000204791.11	ENST00000691496.1	963	2	-339	9	-339	0	multi-exon	FALSE	canonical	3	16	junction_1	0	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	144050167	False	NA	9	True	ATTAAA	-16	NA	144050187	144051646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144050629_144050794
transcript_139511.nic	chr8	+	1039	2	NIC	ENSG00000204791.11	novel	869	3	NA	NA	-2	0	intron_retention	FALSE	canonical	2	5	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGCAACTGTTCCCCCT	144050504	False	NA	9	True	ATTAAA	-16	NA	144050524	144051646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144050859_144050941
transcript_139512.nnic	chr8	+	1019	2	NNC	ENSG00000204791.11	novel	963	2	NA	NA	1	-2	intron_retention	FALSE	canonical	3	9	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCAACTGTTCCCCCTCT	144050000	True	NA	11	True	ATTAAA	-18	NA	144050530	144051648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144050696_144050794
transcript_139514.known	chr8	+	606	3	FSM	ENSG00000178896.9	ENST00000525936.1	606	3	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_2	168.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTGCCCGAGATGTGC	144069622	True	NA	NA	False	NA	NA	NA	144078647	144080516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144078900_144079942_144080022_144080241
transcript_139516.known	chr8	+	842	3	FSM	ENSG00000178896.9	ENST00000316052.6	842	3	0	0	0	0	multi-exon	FALSE	canonical	2	362	junction_1	45	4194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCTCACTGTACGTTATCA	144069646	True	NA	19	True	AATAAA	-20	NA	144078671	144080648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144078900_144079942_144080150_144080241
transcript_13952.known	chr1	+	4063	19	FSM	ENSG00000117322.18	ENST00000367058.7	4063	19	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_10	4.59468291736341	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGCCTTATTTTGTTTT	207453671	True	NA	NA	False	AATAAA	-26	NA	207454229	207489895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207454477_207466525_207466913_207468526_207468716_207468799_207468900_207469149_207469233_207469694_207470103_207470739_207470917_207470996_207471088_207471422_207471500_207472771_207473180_207473800_207473886_207474240_207474324_207474823_207475217_207476233_207476420_207477884_207478071_207479256_207479281_207479977_207480054_207485463_207485573_207489141
transcript_139522.known	chr8	-	1264	1	FSM	ENSG00000255224.1	ENST00000524499.1	1264	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGCTGCAATCTGGGG	-144079151	False	NA	-11	True	AATAAA	-14	NA	144079265	144078001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144078000_144079300
transcript_139524.known	chr8	+	2054	12	FSM	ENSG00000197858.11	ENST00000355091.9	2054	12	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_1	36.8447715433634	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	144079294	True	NA	16	True	AATAAA	-23	NA	144082633	144086216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144082805_144083123_144083304_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_139528.known	chr8	+	1840	11	FSM	ENSG00000197858.11	ENST00000361036.10	1840	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	180.880623616793	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTCCTGGCCCGCTG	144079328	True	NA	16	True	AATAAA	-23	NA	144082667	144086216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144082805_144083388_144083501_144083713_144083862_144083938_144084041_144084133_144084331_144084412_144084610_144084721_144084876_144085042_144085139_144085288_144085480_144085572_144085744_144085881
transcript_13953.nic	chr1	+	687	4	ISM	ENSG00000203710.12	ENST00000434033.5	2377	11	-194	23262	0	4123	5prime_fragment	FALSE	canonical	0	0	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTGCAATCTGTC	NA	False	NA	NA	False	AATAAA	-14	NA	207496146	207511733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_207496389_207505903_207506084_207506713_207506814_207511568
transcript_139534.known	chr8	+	1191	7	FSM	ENSG00000179091.5	ENST00000318911.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	4240	junction_3	145.057938616111	363	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATTTGAGTTATTATATG	144069250	True	NA	14	True	AATAAA	-18	NA	144095075	144097525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144095229_144095832_144096030_144096123_144096251_144096336_144096495_144096583_144096745_144097033_144097135_144097231
transcript_139542.known	chr8	-	1348	9	FSM	ENSG00000179526.17	ENST00000398712.7	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_3	83.5434018938659	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144099810	True	NA	-6	True	ATTAAA	-16	NA	144103773	144098636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_139543.nic	chr8	-	1555	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	182.891873794327	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144104006	False	NA	-6	True	ATTAAA	-16	NA	144104274	144098636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103846
transcript_139544.nic	chr8	-	1353	9	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_8	182.597533868889	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103656	True	NA	-6	True	ATTAAA	-16	NA	144104250	144098636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099206_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_139545.known	chr8	+	1098	8	FSM	ENSG00000179632.10	ENST00000532522.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	298.016709571248	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGCACTGCCC	144104947	True	NA	NA	False	NA	NA	NA	144104974	144107217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144105150_144105639_144105767_144105868_144105998_144106075_144106242_144106342_144106465_144106554_144106675_144106834_144106964_144107087
transcript_139551.nic	chr8	-	1424	8	NIC	ENSG00000179526.17	novel	1348	9	NA	NA	0	0	intron_retention	FALSE	canonical	3	44	junction_7	186.347491947442	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103656	True	NA	-6	True	ATTAAA	-16	NA	144104250	144098636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099080_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_139554.known	chr8	-	1687	8	FSM	ENSG00000179526.17	ENST00000359551.6	1687	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	168.834177795364	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103643	True	NA	-6	True	ATTAAA	-16	NA	144104237	144098636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144103552
transcript_139556.nic	chr8	-	1228	8	NIC	ENSG00000179526.17	novel	1687	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_7	232.355463082945	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGCATCCCTTTCATGGT	-144103656	True	NA	-6	True	ATTAAA	-16	NA	144104250	144098636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144098789_144098865_144098995_144099276_144099431_144099509_144099619_144099702_144099845_144099928_144100070_144103050_144103226_144104024
transcript_139565.known	chr8	+	1712	12	FSM	ENSG00000179832.18	ENST00000423230.6	1712	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	19.5904345017394	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGGGACATTTTTGTA	144145330	True	NA	6	True	AATAAA	-17	NA	144148035	144213467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144148077_144163770_144163849_144168294_144168441_144179454_144179587_144180177_144180341_144180424_144180524_144190783_144190936_144191714_144191856_144192308_144192402_144199121_144199201_144200427_144200542_144212993
transcript_139572.nnic	chr8	+	770	5	NNC	ENSG00000179832.18	novel	5349	44	NA	NA	0	-21166	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	29.364093720052	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTCTTGACATATTTTG	144145310	True	NA	NA	False	AATAAA	-18	NA	144148015	144172116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144148077_144160969_144161090_144163770_144163849_144168294_144168441_144171751
transcript_139577.known	chr8	-	2428	16	FSM	ENSG00000261236.8	ENST00000569669.6	2428	16	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_11	105.517054966905	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCGAGCCTTCCCCTCAC	-144280863	True	NA	-5	True	NA	NA	NA	144291438	144262044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144262318_144262395_144262504_144262587_144262673_144262852_144263142_144263220_144263402_144263477_144263611_144263691_144263762_144263830_144263912_144263980_144264143_144264224_144264438_144264514_144264617_144264713_144264832_144264916_144265072_144276223_144276305_144289094_144289305_144291271
transcript_139581.known	chr8	+	1106	2	FSM	ENSG00000260428.3	ENST00000567180.3	1106	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGGCCAACTGTCCTC	144266159	True	NA	20	True	ATTAAA	-22	NA	144266452	144268481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144267181_144268103
transcript_139583.known	chr8	+	2134	13	FSM	ENSG00000185122.11	ENST00000528838.6	2134	13	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_9	85.0406765416801	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTCCATGTGTTTCC	144279576	True	NA	35	True	TATAAA	-17	NA	144291603	144314720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144291875_144308905_144309015_144309454_144309592_144309771_144309897_144311173_144311250_144311320_144311383_144311504_144311602_144311699_144311837_144311962_144312245_144313510_144313617_144313845_144313912_144313984_144314055_144314124
transcript_139587.known	chr8	+	1757	5	FSM	ENSG00000185803.12	ENST00000530047.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	201.695779579048	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGAGTTGGCATTAATTCT	144356181	True	NA	26	True	AATAAA	-13	NA	144358556	144361270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144358611_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_139588.known	chr8	+	1247	5	FSM	ENSG00000185803.12	ENST00000526338.7	1247	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	252.821453796943	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356201	True	NA	28	True	AATAAA	-15	NA	144358576	144361272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144358611_144359183_144359424_144360114_144360494_144360589_144360714_144360802
transcript_139589.known	chr8	+	2158	5	FSM	ENSG00000185803.12	ENST00000643944.2	2158	5	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_1	55.2827956963104	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGGCATTAATTCTTT	144356237	True	NA	28	True	AATAAA	-15	NA	144358612	144361272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144359066_144359183_144359424_144359622_144360494_144360589_144360714_144360802
transcript_139592.nic	chr8	-	797	4	ISM	ENSG00000261587.2	ENST00000565365.1	975	5	463	0	-381	0	3prime_fragment	FALSE	canonical	3	27	junction_1	8.48528137423857	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGGATCATTTTAGGGG	-144350426	False	4025	-9	True	AATAAA	-15	NA	144354451	144353227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_144353528_144353777_144353864_144353953_144354150_144354236
transcript_139595.known	chr8	-	2007	5	FSM	ENSG00000182325.11	ENST00000524492.5	2007	5	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	16.0058583025091	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGTGTGTGTGGTCCTC	-144353948	False	NA	-6	True	AATAAA	-13	NA	144357973	144355430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144355679_144355967_144356215_144356299_144356532_144356599_144356714_144356807
transcript_139598.known	chr8	+	1960	15	FSM	ENSG00000173137.12	ENST00000308860.11	1960	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	10.8984177844347	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373066	True	NA	NA	False	NA	NA	NA	144374046	144393242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391782_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_13960.known	chr1	+	663	4	FSM	ENSG00000197721.17	ENST00000531844.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	5.8878405775519	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCTGTGCAATCTGTA	207643643	True	NA	6	True	AATAAA	-14	NA	207645112	207684036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207645331_207677388_207677569_207678197_207678298_207683871
transcript_139602.nnic	chr8	+	1910	14	NIC	ENSG00000173137.12	novel	1960	15	NA	NA	-29	0	combination_of_known_splicesites	TRUE	canonical	2	2	junction_8	17.1950178555666	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	NA	False	NA	NA	False	NA	NA	NA	144374012	144393242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390855_144391057_144391133_144391275_144391360_144391475_144391579_144391712_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_139603.known	chr8	+	2027	14	FSM	ENSG00000173137.12	ENST00000529654.5	2027	14	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	13.8739038161792	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTCCTTGTGTTTTGT	144373065	True	NA	NA	False	NA	NA	NA	144374045	144393242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144374108_144379386_144379491_144383080_144383231_144390670_144390747_144390860_144391057_144391133_144391275_144391360_144391475_144391579_144391867_144391940_144392023_144392091_144392171_144392253_144392346_144392444_144392698_144392775_144392893_144392968
transcript_139608.known	chr8	-	4480	38	FSM	ENSG00000071894.17	ENST00000616140.2	4480	38	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_37	76.8452097879134	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTGTGTGGTCATTAC	-144403783	True	NA	-4	True	AAAACA	-25	NA	144409335	144393230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144393366_144393451_144393591_144393666_144393797_144393882_144394039_144394112_144394161_144394233_144394301_144394378_144394556_144394643_144394797_144394881_144395024_144395097_144395183_144395264_144395356_144395434_144395552_144396347_144396501_144396597_144396742_144396839_144396930_144397206_144397414_144397486_144397662_144397742_144397880_144397953_144398133_144398301_144398444_144398524_144398639_144398778_144398869_144398957_144399039_144399127_144399203_144399275_144399374_144399451_144399504_144399587_144399711_144399780_144399869_144399991_144400086_144400165_144400277_144400353_144400494_144400670_144400818_144400923_144401076_144401210_144401292_144401429_144401564_144401645_144401674_144409014_144409173_144409288
transcript_139609.known	chr8	-	668	4	FSM	ENSG00000147804.10	ENST00000532718.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.09120616516523	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144412872	True	NA	-5	True	AGTAAA	-19	NA	144413586	144412413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512
transcript_139610.known	chr8	-	498	3	FSM	ENSG00000147804.10	ENST00000530807.5	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	31.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144412855	True	NA	-5	True	AGTAAA	-19	NA	144413569	144412413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413512
transcript_139611.known	chr8	-	2778	3	FSM	ENSG00000147804.10	ENST00000529462.5	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCACATGTTTCTGTGAG	-144412871	True	NA	NA	False	ATTAAA	-13	NA	144413585	144410394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412947_144413236_144413390_144413512
transcript_139612.known	chr8	+	485	1	FSM	ENSG00000272115.1	ENST00000607491.1	485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCGTGGAAATATGTGTTT	144409468	False	NA	NA	False	AATAAA	-30	NA	144409491	144409976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144409500_144410000
transcript_139613.known	chr8	-	795	3	FSM	ENSG00000147804.10	ENST00000531013.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.5	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCATGGCTGTGCTCTCCTT	-144412877	True	NA	-6	True	AGTAAA	-18	NA	144413591	144412414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413236
transcript_139614.known	chr8	-	2123	12	FSM	ENSG00000147804.10	ENST00000301305.8	2123	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	29.6815049405718	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGGCTGTGCTCTCCTTG	-144416832	False	NA	-5	True	AGTAAA	-19	NA	144416844	144412413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144412667_144412758_144412947_144413236_144413390_144413512_144413568_144413749_144413882_144413957_144414096_144414261_144414435_144414724_144414897_144414973_144415111_144415226_144415420_144415809_144416092_144416597
transcript_139622.known	chr8	-	650	10	FSM	ENSG00000160948.14	ENST00000533806.5	650	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	107.337474040213	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGCTGTTCGACCTGGAG	-144424480	True	NA	NA	False	NA	NA	NA	144428548	144423863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425001_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_13963.known	chr1	+	3371	14	FSM	ENSG00000117335.20	ENST00000358170.6	3371	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	325.560381696203	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_139631.known	chr8	-	948	10	FSM	ENSG00000160948.14	ENST00000292510.6	948	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_9	55.0434172065814	1250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144424480	True	NA	-22	True	AATAAA	-18	NA	144428548	144423616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_139658.known	chr8	-	573	9	FSM	ENSG00000160948.14	ENST00000531032.5	573	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_8	57.9459608169543	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATGCACCGCATGAGC	-144424475	True	NA	NA	False	NA	NA	NA	144428543	144424104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908_144426980_144428488
transcript_13967.known	chr1	+	3278	13	FSM	ENSG00000117335.20	ENST00000322875.8	3278	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_6	278.463180789769	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767606_207767652_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_139681.known	chr8	-	892	9	FSM	ENSG00000160948.14	ENST00000526054.5	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_5	35.3022662162077	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGGGTGGCTCCCCCA	-144422915	False	NA	-22	True	AATAAA	-18	NA	144426983	144423616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144423923_144424040_144424133_144424214_144424269_144424717_144424820_144424945_144425052_144425682_144425773_144426025_144426064_144426179_144426209_144426908
transcript_139685.known	chr8	-	853	3	FSM	ENSG00000187954.13	ENST00000533764.5	853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	60.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTGGGTGTGGCAGGCC	-144464272	True	NA	NA	False	NA	NA	NA	144465434	144464274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465207
transcript_139686.known	chr8	-	1216	3	FSM	ENSG00000187954.13	ENST00000306145.10	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	33	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAAAACTGCCCATTTTT	-144464330	True	NA	-8	True	AATAAA	-21	NA	144465492	144463824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465352
transcript_139687.known	chr8	-	581	3	FSM	ENSG00000187954.13	ENST00000530637.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	51	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGGCTGCCACCACCA	-144465624	False	NA	NA	False	GGGGCT	-21	NA	144465667	144464577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465409
transcript_139688.known	chr8	-	1162	3	FSM	ENSG00000187954.13	ENST00000424149.6	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	47	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCCATTTTTGAGAGGGA	-144465605	False	NA	0	True	AATAAA	-29	NA	144465648	144463816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144464613_144464808_144465097_144465570
transcript_139690.known	chr8	-	592	2	FSM	ENSG00000187954.13	ENST00000524623.1	592	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTCTTGGCTGCCACCA	-144464266	True	NA	NA	False	GGGGCT	-18	NA	144465428	144464580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144465097_144465352
transcript_139694.known	chr8	-	492	3	FSM	ENSG00000160973.8	ENST00000525197.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	417.5	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGCCCAGTCCCCCGCCA	-144463736	True	NA	NA	False	NA	NA	NA	144475823	144474872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144475057_144475156_144475224_144475582
transcript_139698.known	chr8	+	807	2	FSM	ENSG00000160972.10	ENST00000528430.2	807	2	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_1	0	295	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTCGTTGTGTGTTGTGT	144500488	True	NA	18	True	GATAAA	-18	NA	144501088	144502120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144501295_144501519
transcript_13970.known	chr1	+	3320	13	FSM	ENSG00000117335.20	ENST00000367042.6	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_11	272.761138890585	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCATGATGATGTGT	207738347	True	NA	14	True	AATAAA	-15	NA	207752053	207795504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_139703.nic	chr8	+	952	4	NIC	ENSG00000167700.9	novel	1552	5	NA	NA	-97	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	248.813629494492	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTGTGCCTGGAATAT	144509511	False	NA	32	True	AATAAA	-24	NA	144509521	144511213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144510016_144510597_144510723_144510793_144510904_144510990
transcript_139705.known	chr8	+	5337	4	FSM	ENSG00000160959.8	ENST00000292524.6	5337	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	74.7187318474349	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAACATTTTCTTAAAGC	144516618	True	NA	35	True	AATAAA	-23	NA	144517991	144525172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144518042_144519614_144520055_144520237_144520823_144520910
transcript_139707.nic	chr8	+	2117	4	NIC	ENSG00000160959.8	novel	2243	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	75.19012937584	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGGCTGTTTTTTTTTC	144516604	True	NA	12	True	NA	NA	NA	144517977	144522024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_+_144518042_144519700_144520055_144520237_144520823_144520910
transcript_139708.known	chr8	-	1637	4	FSM	ENSG00000213563.7	ENST00000534680.5	1637	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	39.3474550920669	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTCCATTAAAACTTT	NA	False	NA	-39	True	NA	NA	NA	144529132	144526251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144526640_144526959_144527788_144528023_144528073_144528760
transcript_139710.known	chr8	+	586	3	FSM	ENSG00000255085.8	ENST00000578723.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCATGGATGCCATGTG	144700522	True	NA	NA	False	NA	NA	NA	144700658	144707335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144700729_144705952_144706043_144706909
transcript_139712.known	chr8	+	693	2	FSM	ENSG00000255085.8	ENST00000528794.3	693	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTGGTGGTGTATG	144700522	True	NA	NA	False	ACTAAA	-14	NA	144700658	144707532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144700729_144706909
transcript_139713.known	chr8	+	423	2	FSM	ENSG00000255085.8	ENST00000524514.1	423	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCACAAAGCCTGTTGTA	NA	False	NA	NA	False	AATAAA	-20	NA	144700352	144707206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144700479_144706909
transcript_139715.known	chr8	-	2953	5	FSM	ENSG00000198169.9	ENST00000292562.12	2953	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	15.8804124631572	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTCTTTGGGCTTTGACA	-144755197	True	NA	-5	True	AATAAA	-20	NA	144755531	144720908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144723383_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_139722.nnic	chr8	-	844	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-86	6696	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	25.8976350271603	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGCCCAAATTTGATA	-144755495	False	NA	10	True	AATAAA	-18	NA	144755617	144746757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144747037_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_139726.nnic	chr8	-	783	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-86	1543	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	23.8156986040721	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCAATTCCATCCTTCT	-144755495	False	NA	NA	False	AATATA	-17	NA	144755617	144751910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_139728.nnic	chr8	-	621	5	NNC	ENSG00000198169.9	novel	618	4	NA	NA	-86	1381	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	23.8156986040721	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTTTCTTCACTTTAA	-144755495	False	NA	NA	False	AATACA	-18	NA	144755617	144752072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_-_144752129_144753682_144753797_144754191_144754322_144754695_144754804_144755404
transcript_139732.known	chr8	-	618	4	FSM	ENSG00000198169.9	ENST00000525191.2	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	17.1464281994822	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTTGGTGATTTAC	-144755107	True	NA	1	True	AATATA	-22	NA	144755441	144753453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144753797_144754191_144754322_144754695_144754804_144755404
transcript_139739.known	chr8	-	1901	6	FSM	ENSG00000196378.13	ENST00000343459.8	1901	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	34.3546212320846	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGCATGTTCATTTTAG	-144787283	False	2180	-1	True	ATTAAA	-25	NA	144787304	144773113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144774606_144777457_144777578_144778037_144778165_144778438_144778526_144780231_144780281_144787278
transcript_139753.known	chr8	-	556	4	FSM	ENSG00000161016.18	ENST00000529163.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_3	15978.8128539708	4359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGCCCACCCCCATG	-144615243	True	NA	-17	True	AATAAA	-19	NA	144792390	144789766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144792365
transcript_139754.known	chr8	-	1041	6	FSM	ENSG00000161016.18	ENST00000262584.7	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	9348	junction_5	9970.84211087509	70349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGCTGTGCCCACCCCC	-144792542	False	NA	-20	True	AATAAA	-16	NA	144792587	144789769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792365
transcript_139755.known	chr8	-	965	6	FSM	ENSG00000161016.18	ENST00000394920.6	965	6	0	0	0	0	multi-exon	FALSE	canonical	3	1447	junction_5	12049.3929042089	24582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615242	True	NA	-19	True	AATAAA	-17	NA	144792389	144789768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792244
transcript_139756.known	chr8	-	540	5	FSM	ENSG00000161016.18	ENST00000528296.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13943.9055594191	3699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144792080	False	NA	-19	True	AATAAA	-17	NA	144792125	144789768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791308_144791849_144791915_144791991
transcript_139757.known	chr8	-	717	4	FSM	ENSG00000161016.18	ENST00000526668.5	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	17173	junction_2	10267.8600280465	4986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGTGCCCACCCCCAT	-144791914	False	NA	-18	True	AATAAA	-18	NA	144791959	144789767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772
transcript_139758.known	chr8	-	698	5	FSM	ENSG00000161016.18	ENST00000531975.5	698	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	13945.6670578176	4873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGTGCCCACCCCCATGG	-144792012	False	NA	-16	True	AATAAA	-20	NA	144792057	144789765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791496_144791772_144791873_144791991
transcript_139759.known	chr8	-	551	5	FSM	ENSG00000161016.18	ENST00000527914.5	551	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14532.575500836	3824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTGCCCACCCCCA	-144615276	True	NA	-19	True	AATAAA	-17	NA	144792423	144789768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791311_144791991_144792141_144792365
transcript_13976.known	chr1	+	3233	12	FSM	ENSG00000117335.20	ENST00000354848.5	3233	12	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_6	171.944926797041	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_139760.known	chr8	-	730	6	FSM	ENSG00000161016.18	ENST00000533397.5	730	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12479.3642241903	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAGTGCTGAGGGCCTCAA	-144792108	False	177147	-59	True	NA	NA	NA	144792153	144789808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144791276_144791308_144791370_144791496_144791772_144791915_144791991
transcript_139761.known	chr8	-	876	6	FSM	ENSG00000161016.18	ENST00000529920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	2	120	junction_2	14576.3084489867	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGGCCTCAATAAAGTT	-144792098	False	NA	-52	True	NA	NA	NA	144792143	144789801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144789963_144790354_144790471_144790677_144790764_144791276_144791496_144791772_144791915_144791991
transcript_139762.known	chr8	-	745	5	FSM	ENSG00000161016.18	ENST00000532702.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	7806.62892595133	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAACCCAGAAATGCA	-144615237	True	NA	NA	False	NA	NA	NA	144792384	144790354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144790471_144791276_144791496_144791772_144791915_144791991_144792141_144792265
transcript_139767.nnic	chr8	+	563	5	NNC	ENSG00000197363.11	novel	3238	5	NA	NA	-18	-200	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	2.38484800354236	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTTCGTTTGTGAGT	144798332	True	NA	NA	False	AATAAA	-18	NA	144798857	144807127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144798938_144802869_144802948_144803640_144803768_144804124_144804239_144806963
transcript_139768.nnic	chr8	+	542	5	NNC	ENSG00000197363.11	novel	456	5	NA	NA	-18	-200	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.90512483795333	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGAAGTTCGTTTGTGAGT	144798332	True	NA	NA	False	AATAAA	-18	NA	144798857	144807127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr8_+_144798938_144802869_144802948_144803640_144803768_144804145_144804239_144806963
transcript_139771.known	chr8	+	546	5	FSM	ENSG00000147789.16	ENST00000529767.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	35.5457451743524	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGAAAGTGACAGGCTT	144824899	True	NA	NA	False	NA	NA	NA	144827576	144841524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829091_144829426_144829605_144837390_144837508_144841354
transcript_139773.known	chr8	+	1906	5	FSM	ENSG00000147789.16	ENST00000325217.10	1906	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	28.6792607994	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAATTGCTTTTTATC	144824882	True	NA	8	True	AATAAA	-18	NA	144827559	144847509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829091_144829444_144829605_144837390_144837508_144845978
transcript_139775.known	chr8	+	2738	5	FSM	ENSG00000147789.16	ENST00000527218.6	2738	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	33.176610737084	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAGTAGGTTAAAATAA	144824901	True	NA	89	True	NA	NA	NA	144827578	144843772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837393_144837508_144841354
transcript_139776.known	chr8	+	1874	5	FSM	ENSG00000147789.16	ENST00000525266.5	1874	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	26.119915773218	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGAATTGCTTTTTATC	144824881	True	NA	8	True	AATAAA	-18	NA	144827558	144847509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829091_144829477_144829605_144837390_144837508_144845978
transcript_139779.known	chr8	+	2125	4	FSM	ENSG00000147789.16	ENST00000544249.2	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	36.8510515453766	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTATATGGAATCGTT	144824840	True	NA	22	True	AATAAA	-19	NA	144827517	144843222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829091_144837390_144837508_144841354
transcript_139780.known	chr8	+	855	4	FSM	ENSG00000147789.16	ENST00000532382.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	20.8859335970941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACGTTTCTGATTCTGAGG	144824877	True	NA	NA	False	NA	NA	NA	144827554	144841475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144829042_144829605_144837390_144837508_144841354
transcript_139785.known	chr8	+	569	3	FSM	ENSG00000147789.16	ENST00000532393.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	43.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAATGCCAAAAAAAGTT	144824905	True	NA	NA	False	AATACA	-19	NA	144827582	144841782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_144827610_144837393_144837508_144841354
transcript_139787.known	chr8	-	849	2	FSM	ENSG00000170619.10	ENST00000529143.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCCGAGCGTCCTGATG	-144852636	False	2608	NA	False	NA	NA	NA	144852657	144850824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852379
transcript_139788.known	chr8	-	848	2	FSM	ENSG00000170619.10	ENST00000533270.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGCCGAGCGTCCTGAT	-144850395	True	NA	NA	False	NA	NA	NA	144853003	144850825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852725
transcript_139789.known	chr8	-	1305	2	FSM	ENSG00000170619.10	ENST00000402718.4	1305	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCGTGTGATGCAG	-144850459	True	NA	-4	True	AATAAA	-30	NA	144853067	144850165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852992
transcript_13979.known	chr1	+	3281	12	FSM	ENSG00000117335.20	ENST00000367041.5	3281	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_10	307.388950585653	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207790252_207790346_207793518
transcript_139790.known	chr8	-	1430	2	FSM	ENSG00000170619.10	ENST00000305103.4	1430	2	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCTCATCAGAGGATGGCG	-144850440	True	NA	-14	True	AATAAA	-20	NA	144853048	144850175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144851396_144852838
transcript_139793.known	chr8	-	6337	6	FSM	ENSG00000196150.14	ENST00000417550.7	6337	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	16.4365446490435	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTATTTGCAGTGAAGAA	-144899330	True	NA	NA	False	AATAAA	-17	NA	144901453	144876954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144882837_144886839_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_139797.known	chr8	-	593	5	FSM	ENSG00000196150.14	ENST00000533221.5	593	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	27.9049726751344	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACATGTGTGTTGAGTGT	-144899300	True	NA	NA	False	NA	NA	NA	144901423	144882605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144882837_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_139798.nic	chr8	-	774	5	ISM	ENSG00000196150.14	ENST00000533622.5	672	6	-38	3939	1	3093	5prime_fragment	FALSE	canonical	3	12	junction_4	26.1438329248027	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144899341	True	NA	-2	True	ATTAAA	-18	NA	144901464	144886593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901336
transcript_139799.nic	chr8	-	749	5	ISM	ENSG00000196150.14	ENST00000417550.7	6337	6	-48	9639	-22	3093	5prime_fragment	FALSE	canonical	3	47	junction_4	12.6762573340872	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144901421	False	NA	-2	True	ATTAAA	-18	NA	144901501	144886593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr8_-_144886903_144889580_144889695_144889932_144890060_144890307_144890404_144901398
transcript_1398.nic	chr1	+	2279	11	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_1	24.7469190001503	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578517	True	NA	16	True	AATAAA	-24	NA	6579995	6589280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_6580071_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_139803.nnic	chr8	-	635	4	NIC	ENSG00000196150.14	novel	6337	6	NA	NA	-22	3093	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	29.2004566174344	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTGTTTCCTTTTATT	-144901421	False	NA	-2	True	ATTAAA	-18	NA	144901501	144886593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr8_-_144886903_144889932_144890060_144890307_144890404_144901398
transcript_139805.known	chr8	-	696	3	FSM	ENSG00000170631.15	ENST00000532351.5	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACCTTATTCAGCGTCAA	-144949774	True	NA	NA	False	NA	NA	NA	144950819	144932122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144932591_144946010_144946216_144950796
transcript_139806.known	chr8	-	568	3	FSM	ENSG00000170631.15	ENST00000527512.5	568	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCCTCTCCCAGGAGGGG	-144949830	True	NA	NA	False	NA	NA	NA	144950875	144932404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144932591_144945912_144946216_144950796
transcript_139807.known	chr8	-	2206	2	FSM	ENSG00000170631.15	ENST00000527427.1	2206	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAGAAAAAAAAAAAGAAAAA	-144949830	True	NA	NA	False	NA	NA	NA	144950875	144944088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144946216_144950796
transcript_139809.known	chr8	-	876	5	FSM	ENSG00000196922.11	ENST00000690545.1	2085	5	9	1200	0	-385	multi-exon	FALSE	canonical	3	14	junction_2	5.43139024560011	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGAAAGAGCCTATCAGA	-145001757	True	NA	NA	False	NA	NA	NA	145002895	144978138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144978554_144994478_144994593_144996506_144996608_144999602_144999770_145002816
transcript_139811.known	chr8	-	599	4	FSM	ENSG00000196922.11	ENST00000528392.6	1980	4	17	1364	0	-561	multi-exon	FALSE	canonical	2	5	junction_2	9.28559218478941	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTCTCTAGAGAGAATGG	-145001757	True	NA	NA	False	NA	NA	NA	145002895	144978314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144978554_144994478_144994593_144999602_144999770_145002816
transcript_139812.known	chr8	-	1112	3	FSM	ENSG00000196922.11	ENST00000534037.7	1136	3	20	4	6	-4	multi-exon	FALSE	canonical	3	14	junction_1	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTTGGGTGTAGGT	-145001737	True	NA	NA	False	ATTAAA	-14	NA	145002875	144995721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_-_144996608_144999602_144999770_145002816
transcript_139819.known	chr8	+	2588	5	FSM	ENSG00000182307.14	ENST00000331434.7	2588	5	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_2	190.129561089274	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_145052498_145052585_145052898_145053061_145053147_145053296_145053444_145054017
transcript_139826.known	chr8	+	2676	4	FSM	ENSG00000182307.14	ENST00000530455.5	2676	4	0	0	0	0	multi-exon	FALSE	canonical	1	182	junction_1	197.924227925739	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	145042794	True	NA	18	True	NA	NA	NA	145052466	145056030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr8_+_145052898_145053061_145053147_145053296_145053444_145054017
transcript_139833.known	chr9	+	2923	2	FSM	ENSG00000227518.5	ENST00000422679.1	2923	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTGGTATTTTG	NA	False	NA	NA	False	GATAAA	-18	NA	27656	30891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_30446_30757
transcript_139838.known	chr9	-	1771	16	FSM	ENSG00000172785.18	ENST00000314367.14	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_15	533.237591406391	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	NA	False	NA	NA	False	ATTAAA	-44	NA	179047	121059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_177722_177821_178815
transcript_139854.known	chr9	-	1807	4	FSM	ENSG00000172785.18	ENST00000382389.5	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_3	703.347393224398	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	-173521	True	NA	NA	False	ATTAAA	-39	NA	179023	171952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_173367_175697_175785_177722_177821_178815
transcript_139857.known	chr9	-	1792	15	FSM	ENSG00000172785.18	ENST00000377400.8	1792	15	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_8	468.051829722011	2790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTTGATGTTGACGACC	NA	False	NA	NA	False	AATAAA	-17	NA	179147	121040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_146101_146159_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_139858.known	chr9	-	1241	14	FSM	ENSG00000172785.18	ENST00000382447.8	1241	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	567.388401038597	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	-173519	True	NA	-6	True	AATAAA	-20	NA	179021	121408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_154708_154796_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_139859.known	chr9	-	1143	13	FSM	ENSG00000172785.18	ENST00000613508.4	1143	13	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	635.937032828111	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	-173506	True	NA	-4	True	AATAAA	-22	NA	179008	121406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121574_121960_122091_123216_123283_123385_123455_134978_135031_152033_152079_156480_156528_162431_162470_163977_164038_172080_172173_173269_173367_175697_175785_178815
transcript_13986.known	chr1	+	1258	11	FSM	ENSG00000117335.20	ENST00000480003.5	1258	11	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_7	257.275027937031	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTTGTTATTCTGTAGTT	207738416	True	NA	NA	False	ATTAAA	-8	NA	207752122	207793646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207767778_207767824_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_139860.known	chr9	-	1731	3	FSM	ENSG00000172785.18	ENST00000382393.2	1731	3	0	0	0	0	multi-exon	FALSE	canonical	3	1761	junction_1	2	2070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGGAAAAGTACTCGG	NA	False	NA	NA	False	ATTAAA	-39	NA	179045	171952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_173367_175697_175785_178815
transcript_139862.nnic	chr9	+	909	6	NNC	ENSG00000107104.21	novel	2232	5	NA	NA	-66	50	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	19.3638839079354	22	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAAGCTCTGATCTTTT	NA	False	NA	7	True	AATAAA	-18	NA	470224	475515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_470375_470555_470678_471211_471327_471448_471587_473193_473274_475211
transcript_139866.nnic	chr9	+	771	5	NNC	ENSG00000107104.21	novel	2232	5	NA	NA	-66	50	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	19.4550764583437	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAAGCTCTGATCTTTT	NA	False	NA	7	True	AATAAA	-18	NA	470224	475515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_470375_470555_470678_471211_471327_473193_473274_475211
transcript_139868.nnic	chr9	+	794	5	NIC	ENSG00000107104.21	novel	2232	5	NA	NA	-66	50	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	18.1176709319934	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAAGCTCTGATCTTTT	NA	False	NA	7	True	AATAAA	-18	NA	470224	475515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_470375_470555_470678_471448_471587_473193_473274_475211
transcript_13987.known	chr1	+	3188	11	FSM	ENSG00000117335.20	ENST00000357714.5	3188	11	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	222.804420961524	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738350	True	NA	23	True	AATAAA	-24	NA	207752056	207795513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248_207761447_207767012_207767196_207770320_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_139876.nnic	chr9	+	661	4	NIC	ENSG00000107104.21	novel	5581	16	NA	NA	-66	50	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	15.542057635833	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTAAGCTCTGATCTTTT	NA	False	NA	7	True	AATAAA	-18	NA	470224	475515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_470375_470555_470683_473193_473274_475211
transcript_139877.nnic	chr9	+	1088	4	NNC	ENSG00000107104.21	novel	2232	5	NA	NA	0	1656	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	11.8977121983832	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTCTGCATGAGTGCCT	469397	True	NA	NA	False	AATAAA	-21	NA	470294	478425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_470375_470555_470683_473193_473274_477624
transcript_139891.nnic	chr9	+	1652	3	NIC	ENSG00000107104.21	novel	3708	4	NA	NA	5	140	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTTTAGAAAAGTTGCC	504305	False	NA	NA	False	AAGAAA	-6	NA	504684	595030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_504755_540507_540668_593608
transcript_139896.known	chr9	+	1781	7	FSM	ENSG00000080503.24	ENST00000324954.10	1781	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.6059888828115	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	2157659	False	NA	10	True	AATAAA	-18	NA	2157682	2193574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_2157891_2161685_2161904_2181570_2181677_2182140_2182243_2186095_2186229_2191265_2191409_2192703
transcript_139899.nic	chr9	+	1406	4	ISM	ENSG00000080503.24	ENST00000635273.1	672	6	751	-778	413	0	3prime_fragment	FALSE	canonical	3	58	junction_2	8.64098759787715	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTGGTGTTGGTGCTTT	2181973	False	NA	10	True	AATAAA	-18	NA	2181983	2193574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_2182243_2186095_2186229_2191265_2191409_2192703
transcript_139909.nnic	chr9	-	1125	4	NNC	ENSG00000236404.12	novel	806	4	NA	NA	-68	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	34.8361242901037	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621457	False	NA	0	True	AATAAA	-25	NA	2621489	2535651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2536016_2536358_2536454_2539147_2539553_2621228
transcript_139913.nic	chr9	-	874	4	FSM	ENSG00000236404.12	ENST00000691704.1	806	4	-68	0	-68	0	multi-exon	FALSE	canonical	3	57	junction_3	15.7480157480236	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2621457	False	NA	0	True	AATAAA	-25	NA	2621489	2535651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2621228
transcript_139914.nnic	chr9	-	863	4	NNC	ENSG00000236404.12	novel	746	4	NA	NA	335	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	35.1978534699048	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2622006	False	NA	0	True	AATAAA	-25	NA	2622038	2535651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_2536016_2536358_2536454_2539398_2539553_2621788
transcript_139915.known	chr9	-	887	4	FSM	ENSG00000236404.12	ENST00000453601.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	32.124756808418	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATTTCCTTATCTTC	-2622341	False	NA	0	True	AATAAA	-25	NA	2622373	2535651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_2536016_2536358_2536454_2539398_2539553_2622099
transcript_139921.known	chr9	+	5723	18	FSM	ENSG00000147852.17	ENST00000681306.1	5723	18	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	21.126902772561	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTTCTTGATGAATA	2622023	False	NA	NA	False	TTTAAA	-18	NA	2622052	2656916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_2622272_2635452_2635573_2639858_2639982_2641376_2641500_2643159_2643532_2643627_2643751_2643836_2643960_2644733_2644854_2644956_2645083_2645573_2645746_2646333_2646553_2647473_2647593_2648207_2648348_2648668_2648811_2650369_2650517_2651873_2651955_2652779_2652950_2653832
transcript_139923.known	chr9	-	2187	18	FSM	ENSG00000080608.10	ENST00000397885.3	2187	18	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_9	49.1366993693461	1787	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCAGCTGTCTCCTCTGTT	-2821136	True	NA	-4	True	TATAAA	-30	NA	2844095	2804151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_2804464_2807813_2807905_2810343_2810432_2811360_2811584_2812219_2812363_2820017_2820099_2823780_2823835_2824716_2824816_2827072_2827152_2828674_2828779_2829773_2829949_2830961_2831029_2831250_2831345_2833356_2833433_2834030_2834167_2837179_2837402_2838425_2838518_2844044
transcript_139924.nnic	chr9	-	1544	2	NNC	ENSG00000080298.16	novel	9307	18	NA	NA	-434	-178178	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTTTAACCTGGAACA	-3526412	False	NA	1	True	AATAAA	-22	NA	3526438	3522909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_3523762_3525746
transcript_139932.nnic	chr9	-	528	5	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	2	-8295	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	6.96419413859206	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	-4666266	True	NA	NA	False	AATAAA	-21	NA	4666421	4654593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4666211_4666257_4666336
transcript_139933.nnic	chr9	-	647	5	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	28	-8295	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	4.15331193145904	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	NA	False	NA	NA	False	AATAAA	-21	NA	4666638	4654593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4666211_4666257_4666434
transcript_139934.nnic	chr9	-	536	4	NNC	ENSG00000106686.17	novel	1444	11	NA	NA	60026	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	4.10960933531265	82	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTGTCAAGCTGGAAA	-4606205	True	NA	-17	True	ATTAAA	-25	NA	4606281	4600609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4600810_4604178_4604270_4605346_4605441_4606130
transcript_139935.nnic	chr9	-	531	4	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	4011	-8295	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	4.49691252107735	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	-4662141	False	155	NA	False	AATAAA	-21	NA	4662296	4654593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4662163
transcript_139937.nnic	chr9	-	636	4	NNC	ENSG00000106686.17	novel	2437	13	NA	NA	0	-8295	intron_retention	FALSE	canonical	2	9	junction_1	4.49691252107735	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGTGTGATCCTATTC	-4666294	True	NA	NA	False	AATAAA	-21	NA	4666449	4654593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4654805_4656040_4656090_4661898_4662037_4666211
transcript_139941.nnic	chr9	-	580	4	NNC	ENSG00000273061.2	novel	256	2	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8.33999733546454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-4679363	False	NA	-10	True	AATAAA	-15	NA	4679547	4676599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4676750_4677934_4678040_4679001_4679166_4679386
transcript_139950.nnic	chr9	-	569	3	NNC	ENSG00000273061.2	novel	256	2	NA	NA	-139	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	NA	False	NA	-10	True	AATAAA	-15	NA	4679641	4676599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_4676750_4679001_4679166_4679386
transcript_139958.known	chr9	-	235	2	FSM	ENSG00000273061.2	ENST00000609131.2	256	2	21	0	21	0	multi-exon	FALSE	canonical	3	26	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTAGTGAAATCCTTAT	-4679287	True	NA	-10	True	AATAAA	-15	NA	4679471	4676599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4676750_4679386
transcript_139959.known	chr9	-	463	2	FSM	ENSG00000273061.2	ENST00000607997.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCCATGTGTTTAGA	-4679318	True	NA	NA	False	AATAAA	-16	NA	4679502	4678818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4679166_4679386
transcript_139965.known	chr9	+	3500	7	FSM	ENSG00000106993.12	ENST00000381854.4	3500	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	18.3484785926972	279	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTGTCCATTTATTCTCT	4675693	True	NA	5	True	AATAAA	-18	NA	4679568	4708399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_4679900_4684876_4685159_4688512_4688607_4697095_4697212_4697756_4697880_4701863_4702029_4706010
transcript_139969.known	chr9	-	4219	5	FSM	ENSG00000147853.17	ENST00000381809.8	4219	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	32.8176781628439	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCAGCACTGTGTCAT	-4738989	True	NA	-2	True	AATAAA	-21	NA	4741202	4709555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4722505_4722626_4740936
transcript_139973.known	chr9	-	705	4	FSM	ENSG00000147853.17	ENST00000447596.4	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	110.460651616562	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGTGTGTAACTATT	-4739014	True	NA	NA	False	ACTAAA	-41	NA	4741227	4712974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_4713097_4718418_4718538_4719134_4719308_4740936
transcript_139975.known	chr9	+	2061	9	FSM	ENSG00000120158.12	ENST00000381750.9	2061	9	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_1	16.4083629591742	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAAGTGTAATAAGTGTAA	4790234	True	NA	75	True	ATTAAA	-17	NA	4792943	4861066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_4793228_4823547_4823620_4826857_4827034_4833153_4833229_4834140_4834266_4841231_4841358_4844524_4844682_4849446_4849551_4860124
transcript_139979.nic	chr9	-	748	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	158	0	158	0	3prime_fragment	FALSE	canonical	3	59	junction_1	0	311	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGAAAAGCCTTTTT	NA	False	NA	-12	True	ATTAAA	-11	NA	5304274	5299875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_5300445_5304095
transcript_139980.nic	chr9	-	503	2	ISM	ENSG00000107014.9	ENST00000416837.1	733	3	158	245	158	-245	3prime_fragment	FALSE	canonical	3	59	junction_1	0	64	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTGCTAGATTTTGC	NA	False	NA	-1	True	AATAAA	-26	NA	5304274	5300120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_5300445_5304095
transcript_139981.nnic	chr9	-	620	4	NNC	ENSG00000107018.8	novel	764	2	NA	NA	-26	26849	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	4.78423336480244	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCCAAATCTCAATGAAA	-5339405	True	NA	-6	True	AATAAA	-19	NA	5339422	5308080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_5308269_5310931_5311073_5335467_5335598_5339261
transcript_139984.nnic	chr9	-	488	3	NNC	ENSG00000107018.8	novel	764	2	NA	NA	-26	26858	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	6	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAATGAAATAATAATTT	-5339405	True	NA	3	True	AATAAA	-28	NA	5339422	5308071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_5308269_5335467_5335598_5339261
transcript_139987.known	chr9	-	1009	2	FSM	ENSG00000107018.8	ENST00000223862.2	1009	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGGTGGACCAAAATGT	NA	False	NA	NA	False	AATACA	-18	NA	5339876	5334929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5335598_5339535
transcript_139988.known	chr9	-	764	2	FSM	ENSG00000107018.8	ENST00000487557.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCATACATAATAACAATA	-5339379	True	NA	NA	False	AATAAA	-15	NA	5339396	5334968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5335598_5339261
transcript_13999.nic	chr1	+	685	5	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-86	32364	-17	1558	5prime_fragment	FALSE	canonical	3	620	junction_4	55.5444641706084	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAACACACCTTTAGTG	207738330	True	NA	NA	False	AATAAA	-4	NA	207752036	207761282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207759725_207761248
transcript_14.known	ERCC-00034	+	1003	1	FSM	ERCC-00034A	DQ855001	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00034_+_0_1000
transcript_1400.known	chr1	+	2347	11	FSM	ENSG00000204859.13	ENST00000377674.9	2347	11	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	28.8749025972383	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578515	True	NA	16	True	AATAAA	-24	NA	6579993	6589280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6580137_6580540_6581300_6582057_6582300_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_140003.known	chr9	-	981	6	FSM	ENSG00000107020.10	ENST00000223864.7	981	6	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	41.5384159543909	3089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGCCCAGCTGCTCTC	-5435087	True	NA	-2	True	AATAAA	-20	NA	5437925	5357970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5358361_5361077_5361188_5361757_5361889_5431896_5431984_5436568_5436695_5437788
transcript_140004.known	chr9	-	530	3	FSM	ENSG00000107020.10	ENST00000473877.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGATTGTCAATGGCAGT	-5436676	False	NA	NA	False	AATAAA	-17	NA	5436694	5392332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5392650_5431896_5431984_5436568
transcript_140007.known	chr9	-	683	2	FSM	ENSG00000286162.3	ENST00000650674.2	717	2	34	0	-34	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTCTTCCCTCACCA	-5628926	True	NA	NA	False	AATAAA	-22	NA	5628981	5577020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_5577512_5628789
transcript_140008.nnic	chr9	-	1023	2	NIC	ENSG00000286162.3	novel	717	2	NA	NA	-350	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCCTCTTCCCTCACCA	-5630063	False	NA	NA	False	AATAAA	-22	NA	5630098	5577020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_5577512_5629566
transcript_140009.nnic	chr9	-	764	2	NIC	ENSG00000286162.3	novel	717	2	NA	NA	-350	-259	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGTTTTAAGTCACTAA	-5630063	False	NA	-18	True	TATAAA	-17	NA	5630098	5577279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_5577512_5629566
transcript_14001.known	chr1	+	408	4	FSM	ENSG00000117335.20	ENST00000493796.5	408	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	337.994411525135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	207738361	True	NA	NA	False	NA	NA	NA	207752067	207759724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752098_207757013_207757203_207757539_207757643_207759638
transcript_140013.known	chr9	-	1000	2	FSM	ENSG00000137040.10	ENST00000485372.1	1000	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTGGAATATACAGAACAA	-6013417	True	NA	NA	False	NA	NA	NA	6015612	6013497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_6014357_6015471
transcript_140014.known	chr9	-	4600	1	FSM	ENSG00000137040.10	ENST00000259569.6	4600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTATTGTGTCTGGAACT	-6013429	True	NA	-5	True	AATAAA	-31	NA	6015624	6011024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_6011000_6015600
transcript_140016.known	chr9	+	802	3	FSM	ENSG00000147854.17	ENST00000381373.3	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	25	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGAATGGCAGTTTTGCTTT	6413389	False	NA	NA	False	AATAAA	-15	NA	6413417	6422979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6413644_6420911_6421143_6422634
transcript_140017.known	chr9	+	3576	16	FSM	ENSG00000147854.17	ENST00000276893.10	3576	16	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_4	10.7732178211629	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCATTTTGCTTTACTT	6411124	True	NA	15	True	AATAAA	-20	NA	6413198	6507054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6413644_6420911_6421143_6433913_6434174_6460572_6460792_6475390_6475501_6477621_6477809_6481642_6481767_6481991_6482100_6486820_6486926_6493825_6493933_6497197_6497361_6498017_6498159_6499834_6499932_6500551_6500710_6504592_6504692_6506032
transcript_140018.known	chr9	-	3843	25	FSM	ENSG00000178445.10	ENST00000321612.8	3843	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	245.695833721969	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCCTTTCTCTTGGTGT	NA	False	NA	-1	True	AATAAA	-17	NA	6645729	6532466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_6533161_6534707_6534789_6536063_6536237_6540050_6540147_6550802_6550915_6553367_6553510_6554668_6554782_6556152_6556303_6558558_6558685_6565353_6565430_6587140_6587284_6588400_6588443_6588617_6588703_6589194_6589293_6592142_6592224_6592850_6592991_6595013_6595120_6602108_6602206_6604587_6604785_6605130_6605279_6606591_6606670_6610191_6610357_6620183_6620320_6644613_6644693_6645244
transcript_140026.known	chr9	+	526	3	FSM	ENSG00000236924.2	ENST00000413145.2	906	3	135	245	81	-245	multi-exon	FALSE	canonical	3	66	junction_2	14.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTCTGTTTTGAAAC	6643659	True	NA	16	True	AATAAA	-16	NA	6645955	6670635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6646086_6669543_6669729_6670424
transcript_140028.nnic	chr9	+	1075	3	Genic_Genomic	ENSG00000206147.5_ENSG00000232946.1	novel	466	1	NA	NA	-10	395	multi-exon	TRUE	non_canonical	0	0	junction_1	0	606	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAATTGTTCTATTATC	NA	False	NA	NA	False	ATTAAA	-23	NA	6639128	6676009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_6639669_6675162_6675648_6675959
transcript_14003.nic	chr1	+	651	4	ISM	ENSG00000117335.20	ENST00000480003.5	1258	11	-86	33922	-17	0	5prime_fragment	FALSE	canonical	3	656	junction_1	46.5068692656138	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAATTCTTTTTTTT	207738330	True	NA	NA	False	NA	NA	NA	207752036	207759724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638
transcript_140033.known	chr9	+	511	3	FSM	ENSG00000229611.2	ENST00000664463.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTCATGGGTAATTTTTG	6704206	True	NA	NA	False	AATAAA	-16	NA	6704269	6707777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6704344_6704452_6704654_6707541
transcript_140034.known	chr9	+	475	3	FSM	ENSG00000229611.2	ENST00000412339.2	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGGGTAATTTTTGTAT	6704268	True	NA	NA	False	AATAAA	-19	NA	6704331	6707780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6704367_6704452_6704654_6707541
transcript_140039.known	chr9	+	4338	22	FSM	ENSG00000107077.19	ENST00000381309.8	4338	22	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_12	11.8300512838569	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTCTGACTTGCTT	6757926	True	NA	6	True	AATAAA	-18	NA	6757972	7175648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094_6893233_6980924_6981119_6984165_6984405_6986343_6986667_6990415_6990525_7011697_7011880_7013787_7014002_7015852_7015930_7046861_7046918_7049091_7049201_7103684_7103871_7128065_7128237_7165237_7165358_7169797_7169891_7174552
transcript_140042.known	chr9	+	1439	8	FSM	ENSG00000107077.19	ENST00000489243.5	1439	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	8.88015443881146	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGTAGCAAGAGATGG	6757463	False	NA	NA	False	AAAACA	-27	NA	6758102	6893632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6849506_6849701_6880011_6880062_6887959_6888064_6893094
transcript_140045.nic	chr9	+	829	5	NIC	ENSG00000107077.19	novel	1439	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	40.0312378024962	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTCTTTTAAGATA	6757622	False	NA	NA	False	AATAAA	-18	NA	6757958	6819079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630_6814746_6818947
transcript_140047.known	chr9	+	1406	4	FSM	ENSG00000107077.19	ENST00000401787.7	1406	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	11.8977121983832	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTTATATTGTCCTTTT	6757317	True	NA	NA	False	ATTAAA	-18	NA	6757653	6815149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6758204_6792971_6793133_6805598_6805775_6814630
transcript_140058.nnic	chr9	+	638	2	FSM	ENSG00000225489.8	ENST00000687821.1	360	2	-140	-138	-121	138	multi-exon	FALSE	canonical	2	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAGAAAAAGAAAACTGC	NA	False	NA	NA	False	NA	NA	NA	6716035	6718230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6716316_6717872
transcript_140059.known	chr9	+	1214	2	FSM	ENSG00000225489.8	ENST00000666851.1	1214	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACAAGTTCAGGTGCAGTG	6716044	True	NA	NA	False	AAAACA	-15	NA	6716156	6718626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_6716617_6717872
transcript_140061.known	chr9	-	279	1	FSM	ENSG00000256968.1	ENST00000397592.3	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	-6748924	False	NA	NA	False	NA	NA	NA	6748981	6748702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_6748700_6749000
transcript_140065.known	chr9	-	2456	2	FSM	ENSG00000137038.8	ENST00000358227.5	2456	2	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_1	0	6488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCCAAAGTGTGTTTGG	-7788888	True	NA	NA	False	AATAAA	-20	NA	7799778	7796499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_7798638_7799460
transcript_140068.nnic	chr9	-	611	2	NNC	ENSG00000137038.8	novel	458	3	NA	NA	-85	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	0	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTCTTTGTCTTATCTG	NA	False	NA	NA	False	AATAAA	-18	NA	7799863	7798343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_7798638_7799546
transcript_14007.known	chr1	+	7826	9	FSM	ENSG00000117335.20	ENST00000469535.5	7826	9	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_8	153.20411221635	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGATGTGTTTATTTCTA	207738361	True	NA	23	True	AATAAA	-24	NA	207752067	207795513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_207752310_207757013_207757203_207757539_207757643_207759638_207761447_207767012_207770363_207783291_207783331_207785070_207785107_207785618_207785683_207793518
transcript_140074.known	chr9	+	1959	2	FSM	ENSG00000225706.2	ENST00000430766.1	1959	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCTTTGTGAGGACT	8858077	True	NA	NA	False	AATAAA	-13	NA	8858133	8861724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_8858324_8859955
transcript_140075.known	chr9	+	1668	2	FSM	ENSG00000225706.2	ENST00000447950.1	1668	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACAGGAGAATTGCTTG	8858073	True	NA	NA	False	NA	NA	NA	8858129	8862255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_8858324_8860781
transcript_140077.known	chr9	+	348	1	FSM	ENSG00000212829.8	ENST00000470205.2	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	9090744	False	NA	NA	False	NA	NA	NA	9090897	9091245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_9090900_9091200
transcript_140083.nnic	chr9	-	845	4	NNC	ENSG00000235448.3	novel	994	2	NA	NA	-136551	10405	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGTGAGTTTGATTA	-12950893	False	NA	NA	False	ATTAAA	-15	NA	12950928	12688148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_12688551_12759551_12759625_12790619_12790766_12950704
transcript_140085.known	chr9	+	739	2	FSM	ENSG00000153714.6	ENST00000489107.1	739	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCTCAGTAGCTCA	12775618	False	NA	NA	False	AATAAA	-20	NA	12775667	12777578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_12776028_12777199
transcript_140086.known	chr9	+	2683	2	FSM	ENSG00000153714.6	ENST00000319264.4	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCACTGATCTTTTC	12774970	True	NA	NA	False	ATTAAA	-16	NA	12775019	12823060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_12776028_12821385
transcript_14009.known	chr1	-	473	3	FSM	ENSG00000232537.2	ENST00000416349.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTGTGTTCATGTAAG	-209155071	False	NA	NA	False	GATAAA	-22	NA	209155101	209147266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209147595_209151404_209151506_209155057
transcript_14010.nnic	chr1	-	564	3	NNC	ENSG00000232537.2	novel	475	3	NA	NA	-2549	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTAGTGTGTTC	-209157620	True	NA	NA	False	GATAAA	-15	NA	209157650	209147273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209147595_209151404_209151506_209157508
transcript_140104.nnic	chr9	+	2127	3	Antisense	novelGene_ENSG00000214121.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	4	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAATTGTCTATTCTTGC	NA	False	NA	9	True	ATTAAA	-19	NA	12948540	12974182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_+_12948974_12958413_12958491_12972565
transcript_140106.known	chr9	-	7821	47	FSM	ENSG00000107186.17	ENST00000319217.12	7821	47	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_20	32.8292037103718	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCAGCAAGCATTTTTTT	-13277049	True	NA	-12	True	AATAAA	-25	NA	13279692	13105706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_13107112_13108935_13109060_13109951_13110065_13110635_13110741_13112023_13112147_13113010_13113055_13113930_13114022_13115247_13115335_13119501_13119650_13121738_13121933_13122086_13122171_13123152_13123299_13125215_13125391_13126515_13126591_13126679_13126773_13133823_13133905_13136091_13136183_13136711_13136804_13137956_13138154_13139986_13140150_13143465_13143565_13147547_13147659_13150510_13150689_13158017_13158111_13162690_13162796_13168365_13168565_13175751_13175876_13176135_13176418_13183417_13183586_13186269_13186387_13188783_13188994_13190113_13190300_13192130_13192296_13193166_13193314_13196120_13196231_13205035_13205108_13205915_13206100_13216773_13216863_13217179_13217295_13219558_13219769_13221371_13221501_13222232_13222447_13223570_13223711_13224373_13224584_13247634_13247802_13250299_13250373_13279399
transcript_140109.nnic	chr9	-	435	4	NNC	ENSG00000234740.1	novel	457	3	NA	NA	-184	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACTTTTTTTCTTCTG	-13276728	False	2643	NA	False	AATAAA	-23	NA	13279371	13274509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_13274611_13276573_13276772_13278411_13278503_13279326
transcript_14011.nnic	chr1	-	506	2	NNC	ENSG00000232537.2	novel	673	3	NA	NA	-2592	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTATTTTAGTGTGTTC	-209157663	False	NA	NA	False	GATAAA	-15	NA	209157693	209147273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209147595_209157508
transcript_140110.nnic	chr9	-	348	3	NNC	ENSG00000234740.1	novel	457	3	NA	NA	-188	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTACTTTTTTTCTTCTG	-13276732	False	NA	NA	False	AATAAA	-23	NA	13279375	13274509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_13274611_13276573_13276772_13279326
transcript_140114.known	chr9	-	8198	9	FSM	ENSG00000147862.18	ENST00000380959.7	8198	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.10327780786685	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGCCTCATGTTTTATT	-14313901	False	NA	-1	True	AATAAA	-18	NA	14313985	14081847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14088327_14120439_14120625_14125631_14125767_14146688_14146808_14150144_14150266_14155824_14155894_14179726_14179781_14306988_14307521_14313481
transcript_140120.known	chr9	-	9121	10	FSM	ENSG00000175893.12	ENST00000380916.9	9121	10	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	13.5646599662505	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGTTTTTATCCTCTTA	-14693319	False	NA	0	True	AATAAA	-18	NA	14693432	14611070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14619099_14619638_14619683_14639895_14640013_14658748_14658888_14662214_14662327_14672829_14672929_14674186_14674386_14680032_14680163_14690336_14690386_14693228
transcript_14013.nnic	chr1	-	435	2	NNC	ENSG00000232537.2	novel	564	3	NA	NA	-2567	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCATCCTCTGATTTTCA	-209157638	True	NA	NA	False	ATTAAA	-18	NA	209157668	209155621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_209155897_209157508
transcript_140131.known	chr9	-	1231	2	FSM	ENSG00000147869.5	ENST00000380911.4	1231	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAAGCGAGACCATAAA	-14722391	True	NA	NA	False	NA	NA	NA	14722733	14719723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_14720387_14722165
transcript_140139.nic	chr9	-	1263	5	ISM	ENSG00000232000.3	ENST00000652088.1	7242	6	-50	8625	-10	-8625	5prime_fragment	FALSE	canonical	0	0	junction_1	1.22474487139159	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCAGGACTCCTTGTCTG	-14992901	True	NA	NA	False	ATTAAA	-22	NA	14993205	14931360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_14931724_14987892_14987957_14989299_14989341_14990227_14990346_14992528
transcript_140141.nnic	chr9	-	1301	5	NNC	ENSG00000232000.3	novel	1944	10	NA	NA	-10	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.22474487139159	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTTAGCCTCCCGATG	-14992901	True	NA	NA	False	AATAAA	-28	NA	14993205	14987300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_14987702_14987892_14987957_14989299_14989341_14990227_14990346_14992528
transcript_140156.nnic	chr9	+	773	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	7.66077672302228	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTCTGCCTGGTTTTC	NA	False	NA	18	True	AATAAA	-23	NA	14993253	15019729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_14993350_14997163_14997324_15001633_15001733_15017354_15017528_15019484
transcript_140157.nnic	chr9	+	959	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.98436277385793	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTCTGCCTGGTTTTC	14993185	True	NA	18	True	AATAAA	-23	NA	14993299	15019729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_14993582_14997163_14997324_15001633_15001733_15017354_15017528_15019484
transcript_140158.nnic	chr9	+	901	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	7.90569415042095	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTCTGCCTGGTTTTC	14993204	True	NA	18	True	AATAAA	-23	NA	14993318	15019729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_14993543_14997163_14997324_15001633_15001733_15017354_15017528_15019484
transcript_140159.nnic	chr9	+	1383	5	NNC	ENSG00000215237.6	novel	1188	8	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.65660395791398	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTCTGCCTGGTTTTC	14993205	True	NA	18	True	AATAAA	-23	NA	14993319	15019729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_14994026_14997163_14997324_15001633_15001733_15017354_15017528_15019484
transcript_140164.known	chr9	-	10483	20	FSM	ENSG00000155158.20	ENST00000512701.6	10483	20	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	6.03360854986168	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTCTTATTCTGGTTG	NA	False	NA	-10	True	AATAAA	-16	NA	15307360	15163621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_15172110_15175018_15175136_15177696_15177815_15182306_15182416_15185279_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_14017.nnic	chr1	+	845	6	NNC	ENSG00000230937.13	novel	1072	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	52.3465376123388	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418099	True	NA	20	True	ACTAAA	-21	NA	209428817	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_209428883_209429017_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
transcript_140174.nic	chr9	-	1667	16	ISM	ENSG00000155158.20	ENST00000512701.6	10483	20	145	21497	-6	1468	5prime_fragment	FALSE	canonical	3	29	junction_1	5.51200709562517	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAGCTAATGGTTTTTGA	-15306039	True	NA	NA	False	AATAAA	-18	NA	15307215	15185118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_15185407_15186943_15187036_15187970_15188133_15189573_15189634_15189724_15189793_15190553_15190663_15191189_15191256_15192589_15192696_15199860_15199926_15203822_15203891_15210087_15210165_15211265_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_140176.nic	chr9	-	638	5	ISM	ENSG00000155158.20	ENST00000505732.5	1881	15	13	24679	13	2872	5prime_fragment	FALSE	canonical	3	37	junction_4	4.76313972081441	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGACGAGTCATTAAATA	-15307202	False	NA	NA	False	NA	NA	NA	15307347	15211265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_15211398_15214138_15214250_15225916_15226013_15267913_15267949_15307083
transcript_140177.nnic	chr9	-	982	2	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	0	-56528	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAGACTGCAGAAAAGAT	NA	False	NA	-53	True	AATAAA	-16	NA	15307360	15305569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_15306275_15307083
transcript_140178.nnic	chr9	-	557	2	NNC	ENSG00000155158.20	novel	10483	20	NA	NA	0	-56953	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACAGCTCCTCTGCATGAC	NA	False	NA	NA	False	AATAAA	-19	NA	15307360	15305994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_15306275_15307083
transcript_140179.known	chr9	-	900	4	FSM	ENSG00000155158.20	ENST00000506891.1	900	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.4419672692682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCATATAATTTGGCTAC	-15306033	True	NA	NA	False	AATAAA	-18	NA	15307209	15249041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_15249688_15249917_15250011_15267913_15267949_15307083
transcript_140180.known	chr9	+	2453	12	FSM	ENSG00000164975.16	ENST00000610884.4	2453	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	141.946736605876	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAAGCCCTTTCCATCATT	NA	False	NA	NA	False	NA	NA	NA	15422733	15465832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630_15461806_15462864_15462991_15465509
transcript_140185.known	chr9	+	2524	10	FSM	ENSG00000164975.16	ENST00000490969.5	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	74.8242384970717	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTTTCTCTTTTTTCGA	15415733	True	NA	9	True	TATAAA	-16	NA	15422868	15462460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718_15460314_15461630
transcript_140190.known	chr9	+	5680	9	FSM	ENSG00000164975.16	ENST00000380821.8	3000	9	-172	-2508	-30	1674	multi-exon	TRUE	canonical	3	322	junction_4	16.5184555876147	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAGTTAAAACTGTATA	NA	False	NA	NA	False	AATAAA	-4	NA	15422703	15464134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_15423194_15423908_15423987_15433551_15433637_15444601_15444707_15447094_15447245_15451319_15451403_15453040_15453206_15457959_15458068_15459718
transcript_14020.nnic	chr1	+	869	6	NNC	ENSG00000230937.13	novel	1007	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	54.1169104809208	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418099	True	NA	20	True	ACTAAA	-21	NA	209428817	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_209428883_209429017_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_140213.nic	chr9	-	944	5	NIC	ENSG00000173068.18	novel	662	3	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	14.9666295470958	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCATTCCTAAGA	-16870773	False	NA	NA	False	AATAAA	-19	NA	16870801	16579790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_16580149_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_140218.known	chr9	-	662	3	FSM	ENSG00000173068.18	ENST00000468187.6	662	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAGTTCATTCCTAAGA	-16727985	False	NA	NA	False	AATAAA	-19	NA	16727997	16579790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_16580149_16582982_16583086_16727796
transcript_140219.known	chr9	-	4841	9	FSM	ENSG00000173068.18	ENST00000484726.5	4841	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.2896688560438	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAACATGGTCTTGTTTT	-16869834	True	NA	NA	False	AAAAAG	-2	NA	16870760	16418293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_16419650_16421261_16421296_16429299_16430000_16435554_16437525_16552529_16552766_16582982_16583086_16727796_16727998_16738359_16738486_16870645
transcript_140220.known	chr9	+	428	3	FSM	ENSG00000234779.1	ENST00000450445.1	428	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	16726409	True	NA	4	True	AATAAA	-17	NA	16726813	16727524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_16726956_16727030_16727107_16727314
transcript_140221.nic	chr9	+	569	2	NIC	ENSG00000234779.1	novel	428	3	NA	NA	-66	0	intron_retention	FALSE	canonical	3	32	junction_1	0	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGATTGTACTGTGAAAC	NA	False	NA	4	True	AATAAA	-17	NA	16726747	16727524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_16727107_16727314
transcript_140230.known	chr9	+	4871	7	FSM	ENSG00000044459.15	ENST00000380641.4	4871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.2799779361785	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTATTCATTATAGTGTA	17132850	True	NA	23	True	AATAAA	-35	NA	17135039	17302051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_140231.nnic	chr9	+	1912	7	NNC	ENSG00000044459.15	novel	4871	7	NA	NA	-27	-2797	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	32.9076992004404	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAACCTTTAC	17132823	True	NA	NA	False	NA	NA	NA	17135012	17299254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_17135237_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189
transcript_140235.nnic	chr9	+	969	6	NNC	ENSG00000044459.15	novel	5518	26	NA	NA	-125322	64709	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.242529486208	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTAATTCTTGATGTTT	NA	False	NA	16	True	AATAAA	-24	NA	17290495	17366760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_17290776_17330631_17330809_17332604_17332731_17340826_17340949_17342324_17342445_17366616
transcript_140238.nic	chr9	+	900	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-49	65487	9	-65487	5prime_fragment	FALSE	canonical	3	69	junction_4	22.6315598225133	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGCACTGATGCAAAAAT	17132801	True	NA	NA	False	AAGAAA	-3	NA	17134990	17236564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_14024.nic	chr1	+	987	5	NIC	ENSG00000230937.13	novel	1007	5	NA	NA	-6	0	combination_of_known_junctions	TRUE	canonical	3	81	junction_3	28.7402157263998	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418092	True	NA	20	True	ACTAAA	-21	NA	209428810	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432203
transcript_140241.nic	chr9	+	2547	5	ISM	ENSG00000044459.15	ENST00000380641.4	4871	7	-26	63817	-26	-63817	5prime_fragment	FALSE	canonical	3	69	junction_4	22.6315598225133	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGAATTTTGGTAGTC	17132824	True	NA	NA	False	AATAAA	-20	NA	17135013	17238234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408
transcript_140244.known	chr9	+	2272	3	FSM	ENSG00000044459.15	ENST00000484374.1	2272	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTCATGCTGATTCTG	17132792	True	NA	0	True	AATAAA	-8	NA	17134981	17168556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17135426_17143287_17143377_17166817
transcript_14025.known	chr1	+	798	5	FSM	ENSG00000230937.13	ENST00000657184.2	809	5	1	10	0	-10	multi-exon	FALSE	canonical	3	28	junction_4	50.4894791020862	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAAGGCAGATTGCAGAT	209418101	True	NA	10	True	AATAAA	-21	NA	209428819	209432838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209431742_209431826_209432672
transcript_140251.nnic	chr9	+	445	2	NNC	ENSG00000044459.15	novel	4871	7	NA	NA	-125279	-3654	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTATGAACATATATAGAAT	NA	False	NA	NA	False	AATAAA	-23	NA	17290538	17298397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_17290776_17298189
transcript_140252.known	chr9	+	5518	26	FSM	ENSG00000044459.15	ENST00000380647.8	5518	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.772853935876	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGCTCATTCATTTCTT	17132850	True	NA	9	True	AATAAA	-17	NA	17135039	17503923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_17135426_17143287_17143377_17226202_17226288_17235657_17235793_17236408_17236589_17273732_17273867_17298189_17298353_17309057_17309253_17330631_17330809_17332604_17332731_17340826_17340949_17342324_17342445_17366616_17366718_17388161_17388254_17394533_17395070_17409292_17409474_17415787_17415882_17415965_17416190_17457523_17457716_17462915_17463014_17464496_17464624_17465980_17466119_17466705_17466892_17484294_17484481_17486988_17487067_17502550
transcript_140253.known	chr9	+	1864	13	FSM	ENSG00000178031.18	ENST00000327883.11	1864	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	2.47767812455308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGTCAAAGCTGATGA	18473905	True	NA	NA	False	ATTAAA	-20	NA	18474099	18684957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029_18574267_18622242_18622370_18635942_18636018_18639253_18639412_18657638_18657751_18661934_18662074_18675856_18675908_18680311_18680517_18681811_18681960_18684715
transcript_140255.known	chr9	+	824	4	FSM	ENSG00000178031.18	ENST00000431052.6	824	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.4142135623731	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCAATTATGTACTAGACT	18473949	True	NA	NA	False	AATAAA	-18	NA	18474143	18574527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_18474296_18504828_18504957_18533246_18533293_18574029
transcript_140256.nic	chr9	+	489	2	ISM	ENSG00000178031.18	ENST00000431052.6	824	4	-62	69424	-18	-69424	5prime_fragment	FALSE	canonical	3	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTCTTACGTGTTTT	18473887	True	NA	NA	False	ATTAAA	-21	NA	18474081	18505103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_18474296_18504828
transcript_140257.known	chr9	+	1599	1	FSM	ENSG00000155876.6	ENST00000380527.3	1599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTCCTTATTTGAAATAA	19044253	True	NA	10	True	AATAAA	-19	NA	19049426	19051025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_19049400_19051000
transcript_140258.known	chr9	-	6323	17	FSM	ENSG00000147874.11	ENST00000380502.8	6323	17	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_2	76.3611638449153	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGGAATTTCCTATA	-19094240	True	NA	-4	True	AATAAA	-15	NA	19102904	19053140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19056405_19057960_19059002_19060087_19060224_19063007_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_140262.nic	chr9	-	1790	14	ISM	ENSG00000147874.11	ENST00000380502.8	6323	17	-62	10021	-62	-4398	5prime_fragment	FALSE	canonical	3	248	junction_9	25.3255723604545	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCAATTTCTAAGAAAA	-19094302	False	NA	NA	False	AAGAAA	-5	NA	19102966	19063161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_19063194_19063513_19063581_19070218_19070301_19076601_19076705_19078175_19078303_19080478_19080673_19082872_19083044_19086733_19086783_19087090_19087157_19089411_19089560_19093170_19093304_19094316_19094396_19096673_19096770_19102523
transcript_14027.known	chr1	+	1007	5	FSM	ENSG00000230937.13	ENST00000429156.6	1007	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	35.688758734369	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTGCCTCTATGTTTTA	209418098	True	NA	22	True	ACTAAA	-23	NA	209428816	209432551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209431742_209431826_209432203
transcript_140274.known	chr9	-	1897	8	FSM	ENSG00000147872.10	ENST00000276914.7	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_4	30.358403335176	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTTTGTTCCATATG	-19125191	True	NA	-17	True	AATAAA	-25	NA	19127492	19115760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19116650_19118320_19118456_19119649_19119832_19120879_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_140279.nic	chr9	-	740	5	ISM	ENSG00000147872.10	ENST00000276914.7	1897	8	-49	5119	-49	220	5prime_fragment	FALSE	canonical	3	238	junction_1	31.8463106183432	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTGGAATTTTATCTTG	-19125240	True	NA	0	True	NA	NA	NA	19127541	19120879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_19121166_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_140280.known	chr9	-	631	5	FSM	ENSG00000147872.10	ENST00000380465.7	631	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	123.726512922655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTCACCTGGCTTGT	-19125175	True	NA	NA	False	AATAAA	-21	NA	19127476	19123234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19123477_19123564_19123648_19126113_19126310_19126396_19126449_19127418
transcript_140281.known	chr9	-	655	4	FSM	ENSG00000147872.10	ENST00000380464.7	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	30.0702880302504	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTCCTATAAATGAAATTGC	-19125189	True	NA	NA	False	NA	NA	NA	19127490	19123312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19123648_19126113_19126310_19126396_19126449_19127418
transcript_140282.known	chr9	-	790	3	FSM	ENSG00000147872.10	ENST00000464326.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	150	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGACTTCATGATTTTTT	-19118422	False	NA	NA	False	ATTAAA	-44	NA	19118446	19108374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19108748_19116358_19116650_19118320
transcript_140317.known	chr9	-	863	6	FSM	ENSG00000137154.13	ENST00000315377.4	863	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10857.96950447	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGTAACAAATAAATAAGAT	-19113333	True	NA	27	True	NA	NA	NA	19380198	19376284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380087
transcript_140333.known	chr9	-	1369	6	FSM	ENSG00000137154.13	ENST00000380394.9	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	23091	junction_5	2518.69100923476	133132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCACAAAGTATGTACTTTT	-19113371	True	NA	NA	False	ACTAAA	-24	NA	19380236	19375714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486_19379619_19380189
transcript_140334.known	chr9	-	1355	5	FSM	ENSG00000137154.13	ENST00000380384.5	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24266	junction_1	2325.39893082886	1975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTGATCTCT	-19113341	True	NA	-37	True	AATAAA	-2	NA	19380206	19376269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19376389_19376493_19376652_19378367_19378515_19378707_19378919_19379486
transcript_140335.known	chr9	-	345	2	FSM	ENSG00000234853.2	ENST00000449348.2	345	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTAAATGACTTTGGTAG	NA	False	NA	NA	False	AATATA	-2	NA	19383887	19383216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_19383350_19383675
transcript_140339.nnic	chr9	+	466	3	NNC	ENSG00000286685.2	novel	243	2	NA	NA	-66	-5	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	0.5	66	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAACAAGAATTTATTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	19789092	19791060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_19789279_19789605_19789750_19790924
transcript_140345.nnic	chr9	+	628	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	-48	-96200	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	8	143	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTGTAAAAGTTTTTC	NA	False	NA	21	True	AATAAA	-29	NA	20658260	20673912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658460_20658690_20658827_20673619
transcript_140346.nnic	chr9	+	591	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	12	-91210	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGATTGTACCATCTGTT	20656379	True	NA	10	True	ATTAAA	-18	NA	20658320	20678902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658460_20658690_20658827_20678586
transcript_140347.nnic	chr9	+	449	3	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	-48	-87887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGTCTAAGATACTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	20658260	20682225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658460_20658690_20658827_20682111
transcript_140350.nnic	chr9	+	828	2	NNC	ENSG00000188352.13	novel	6096	46	NA	NA	-17	-96200	intron_retention	FALSE	canonical	3	27	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTTGTAAAAGTTTTTC	20656350	True	NA	21	True	AATAAA	-29	NA	20658291	20673912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_20658827_20673619
transcript_140351.nic	chr9	+	854	2	ISM	ENSG00000188352.13	ENST00000380249.5	6096	46	19	336543	19	-110700	5prime_fragment	FALSE	canonical	3	43	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAAGGAGAAAGAA	20656386	True	NA	NA	False	NA	NA	NA	20658327	20659412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_20658460_20658690
transcript_140356.nnic	chr9	-	1028	9	NNC	ENSG00000188921.14	novel	8277	7	NA	NA	-39	-7441	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	11.3406073470516	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCTTGTATTTGATAAAAA	NA	False	NA	-1	True	AATAAA	-27	NA	21031679	21006949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_21007120_21008020_21008147_21010724_21010783_21011343_21011439_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_14036.known	chr1	+	704	4	FSM	ENSG00000230937.13	ENST00000366437.7	704	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.8872107200038	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418292	False	NA	20	True	ACTAAA	-21	NA	209429010	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430477_209432203
transcript_140363.known	chr9	-	8277	7	FSM	ENSG00000188921.14	ENST00000495827.3	8277	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	4.30761599444003	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATGTCAGAAATGTGT	-21031364	True	NA	NA	False	AATAAA	-26	NA	21031640	20999508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_21007120_21008020_21008147_21011588_21011696_21015897_21016011_21026595_21026724_21029294_21029399_21031552
transcript_14037.known	chr1	+	916	4	FSM	ENSG00000230937.13	ENST00000667171.1	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	68.0049017841116	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418104	True	NA	20	True	ACTAAA	-21	NA	209428822	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209430424_209430501_209432203
transcript_140376.nnic	chr9	-	786	4	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	-3	5613	multi-exon	TRUE	canonical	1	1	junction_2	3.55902608401044	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTTTTGATTAAT	-21332360	True	NA	-2	True	AATAAA	-17	NA	21335407	21324051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_21324322_21329330_21329416_21330793_21330914_21335096
transcript_140378.nnic	chr9	-	672	3	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	-5	5613	multi-exon	FALSE	canonical	1	3	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTTTTGATTAAT	-21332362	True	NA	-2	True	AATAAA	-17	NA	21335409	21324051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_21324322_21329330_21329420_21335096
transcript_14038.known	chr1	+	908	4	FSM	ENSG00000230937.13	ENST00000431096.6	926	4	18	0	1	0	multi-exon	FALSE	canonical	3	42	junction_2	45.536310297998	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418119	True	NA	20	True	ACTAAA	-21	NA	209428837	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209431742_209431826_209432203
transcript_140380.nnic	chr9	-	586	2	Genic_Genomic	ENSG00000198642.7	novel	5740	1	NA	NA	-8	5613	multi-exon	FALSE	canonical	3	7	junction_1	0	51	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTGAGTTTTTGATTAAT	-21332365	True	NA	-2	True	AATAAA	-17	NA	21335412	21324051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_21324322_21335096
transcript_140382.nic	chr9	-	471	3	ISM	ENSG00000171889.6	ENST00000654736.1	2557	4	40	23000	9	-22515	5prime_fragment	FALSE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTTGTCTGAGCTTC	-21559535	True	NA	NA	False	AATAAA	-24	NA	21559860	21476801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_21477036_21477168_21477293_21559747
transcript_140384.known	chr9	+	6032	8	FSM	ENSG00000099810.21	ENST00000644715.2	6032	8	0	0	0	0	multi-exon	TRUE	canonical	3	294	junction_1	15.8655061600406	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTCTTATTTTTATTTT	21795427	True	NA	6	True	ATTAAA	-17	NA	21802635	21867081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_140385.known	chr9	+	310	2	FSM	ENSG00000099810.21	ENST00000580675.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTGTTTTGGCAGCC	21795438	True	NA	NA	False	ATTAAA	-15	NA	21802646	21815607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432
transcript_140386.known	chr9	+	1309	8	FSM	ENSG00000099810.21	ENST00000580718.1	1309	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	110.940138298608	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGACTCTTTGGTTATTTA	21795453	True	NA	57	True	AAGAAA	-1	NA	21802661	21862367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432_21815520_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859285_21859426_21861975
transcript_140387.known	chr9	+	2241	8	FSM	ENSG00000099810.21	ENST00000419385.5	2241	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.037592457579	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTATTGTTATTT	21795448	True	NA	5	True	AATAAA	-21	NA	21802656	21863286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_21802782_21815432_21815545_21816713_21816773_21818034_21818203_21837907_21838011_21854630_21854871_21859302_21859426_21861975
transcript_140388.known	chr9	+	5586	2	FSM	ENSG00000176399.4	ENST00000325870.3	5586	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGTTTATGCTACATT	22446583	True	NA	10	True	AATAAA	-14	NA	22446823	22455740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_22447733_22451063
transcript_140396.known	chr9	+	879	2	FSM	ENSG00000287843.1	ENST00000658911.1	879	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATATCTGGATGTAGATT	23826459	True	NA	NA	False	AATAAA	-30	NA	23826490	23828877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_23826518_23828025
transcript_140407.known	chr9	-	1236	6	FSM	ENSG00000120159.13	ENST00000483493.6	1236	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	178.888121461432	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCACAGCAACTGGAGCT	-26887898	True	NA	NA	False	NA	NA	NA	26892787	26842393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884903_26886103_26886189_26887312_26887514_26892258
transcript_140408.known	chr9	-	2789	6	FSM	ENSG00000120159.13	ENST00000333916.8	2789	6	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_5	31.2512399753994	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTGTGTCTGTTCTAC	-26887913	True	NA	-2	True	ATTAAA	-18	NA	26892802	26840684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26842648_26861065_26861140_26884809_26884886_26886103_26886189_26887312_26887514_26892412
transcript_14041.known	chr1	+	1072	4	FSM	ENSG00000230937.13	ENST00000451937.6	1072	4	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	25.4209012865835	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418099	True	NA	20	True	ACTAAA	-21	NA	209428817	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432203
transcript_14042.known	chr1	+	849	4	FSM	ENSG00000230937.13	ENST00000458250.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	46.9964537669244	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTATATTGTAATAAAGT	209418104	True	NA	1	True	ATTAAA	-14	NA	209428822	209432800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424_209430477_209431742_209431826_209432672
transcript_140424.known	chr9	-	773	2	FSM	ENSG00000120159.13	ENST00000520187.1	773	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAAGCCACATCATTTAA	-26887914	True	NA	NA	False	AAAAAG	-45	NA	26892803	26842265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26842648_26892412
transcript_140433.known	chr9	+	5325	20	FSM	ENSG00000096872.17	ENST00000380062.10	5325	20	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	14.2712154362444	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTATTTGTAATTTA	26954224	True	NA	NA	False	ATTAAA	-27	NA	26956411	27066134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_140438.nic	chr9	+	2064	19	NIC	ENSG00000096872.17	novel	652	7	NA	NA	24	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	35.9261932025186	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTACCATCTTCTTTT	26976578	True	NA	8	True	AATAAA	-14	NA	26976590	27062925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_26976783_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27044741_27044796_27047273_27047372_27048147_27048275_27055608_27055773_27056333_27056460_27060590_27060652_27062617
transcript_14044.known	chr1	+	1094	4	FSM	ENSG00000230937.13	ENST00000670788.1	1094	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	33.1360830515618	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418101	True	NA	20	True	ACTAAA	-21	NA	209428819	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424_209430501_209431742_209431826_209432203
transcript_140443.known	chr9	+	1462	14	FSM	ENSG00000096872.17	ENST00000429045.6	1462	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_13	41.5384615384615	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCGTGTGATTTACCAAA	26954291	True	NA	NA	False	AATAAA	-21	NA	26956478	27036800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27029024_27029105_27036449
transcript_140444.nnic	chr9	+	1479	13	NNC	ENSG00000096872.17	novel	1462	14	NA	NA	-37	-16518	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_12	43.7234840281005	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCTAGTATCAGCTGAAT	26954125	True	NA	NA	False	ATTAAA	-14	NA	26956312	27020282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_27009019_27009159_27011905_27011969_27016906_27017051_27018646_27018688_27020000
transcript_140447.nic	chr9	+	1133	9	ISM	ENSG00000096872.17	ENST00000648373.1	2432	21	-37	70179	-37	2541	5prime_fragment	FALSE	canonical	3	16	junction_8	49.6284633552158	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACAAAAAGTATTGTTACG	26954125	True	NA	NA	False	NA	NA	NA	26956312	26992705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_26956517_26961948_26962088_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133_26990196_26992382
transcript_140450.known	chr9	+	652	7	FSM	ENSG00000096872.17	ENST00000517866.1	652	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	58.5047481453903	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGATGTCATATTTACT	26976496	False	NA	-19	True	NA	NA	NA	26976566	26990164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_26976783_26978127_26978264_26980570_26980620_26984256_26984356_26984498_26984560_26988668_26988729_26990133
transcript_140451.known	chr9	-	4724	14	FSM	ENSG00000137055.15	ENST00000397292.8	4724	14	0	0	0	0	multi-exon	TRUE	canonical	3	276	junction_4	40.6137820196646	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGATATACCCATTTCTT	-26941386	True	NA	-5	True	AATAAA	-16	NA	26947242	26903371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26906077_26907833_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_140452.known	chr9	-	2041	13	FSM	ENSG00000137055.15	ENST00000520884.5	2041	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_3	40.4793328612131	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCAAGAAGTTTTATCTT	-26941377	True	NA	2	True	AATAAA	-23	NA	26947233	26907802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26907999_26910337_26910440_26913878_26913948_26917096_26917166_26919309_26919530_26920226_26920385_26923177_26923348_26925824_26925961_26926392_26926561_26928099_26928221_26928307_26928409_26935012_26935207_26946896
transcript_140453.known	chr9	-	405	2	FSM	ENSG00000234676.1	ENST00000456198.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCCTTCCAATCTTCAT	-26956281	False	14	NA	False	AATAAA	-16	NA	26956295	26955779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_26956016_26956126
transcript_140454.known	chr9	-	1049	8	FSM	ENSG00000120160.11	ENST00000380032.8	1049	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.25876975726313	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTCTTTATGTCTTCT	NA	False	NA	NA	False	AATAAA	-27	NA	27297150	27284653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27284973_27286208_27286363_27289671_27289732_27291018_27291064_27292400_27292488_27294315_27294403_27296612_27296739_27296979
transcript_140455.known	chr9	-	6487	4	FSM	ENSG00000120162.10	ENST00000262244.6	6487	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	9.62635271879577	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTGTCTTTTTTTAA	-27525397	True	NA	-2	True	AATAAA	-17	NA	27529814	27325208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27330617_27359033_27359237_27455132_27455749_27529554
transcript_140456.known	chr9	-	2678	12	FSM	ENSG00000147894.17	ENST00000644136.1	2678	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	75.4733820956679	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTTTGTTTTCTTAAT	-27571763	True	NA	NA	False	NA	NA	NA	27573457	27547107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27554592_27554626_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_140458.known	chr9	-	3231	11	FSM	ENSG00000147894.17	ENST00000380003.8	3231	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_10	25.7699437329615	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	-27571787	True	NA	-2	True	AATAAA	-17	NA	27573481	27546545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_140459.known	chr9	-	3338	11	FSM	ENSG00000147894.17	ENST00000619707.5	3338	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	58.2480900974444	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTTCAGTTGTTCATT	NA	False	NA	-2	True	AATAAA	-17	NA	27573866	27546545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27548423_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573708
transcript_140461.known	chr9	-	2318	12	FSM	ENSG00000147894.17	ENST00000673600.1	2318	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	76.2794991034359	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATCACCTTACTCTTTT	-27571800	True	NA	NA	False	NA	NA	NA	27573494	27535639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_27536287_27548114_27548419_27548556_27548667_27550649_27550708_27556560_27556797_27558490_27558608_27560226_27560300_27561584_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_140468.nic	chr9	-	1577	5	ISM	ENSG00000147894.17	ENST00000644136.1	2678	12	-42	13678	-5	-285	5prime_fragment	FALSE	canonical	3	138	junction_4	28.6738120939648	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCACTTTTATGTTCAC	-27571805	True	NA	NA	False	AATAAA	-20	NA	27573499	27560785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_27561650_27562380_27562477_27565530_27565591_27566676_27567165_27573430
transcript_140474.nnic	chr9	-	529	4	Antisense	novelGene_ENSG00000277646.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.09120616516523	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTATTTCTT	-29450648	True	NA	NA	False	ATTAAA	-21	NA	29450885	29303910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_-_29304025_29304815_29304881_29450388_29450507_29450653
transcript_140476.nnic	chr9	-	485	3	Antisense	novelGene_ENSG00000277646.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	3.5	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTCTCAGGCAGTTATT	-29450648	True	NA	1	True	ATTAAA	-21	NA	29450885	29304745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_-_29304881_29450388_29450507_29450653
transcript_140478.known	chr9	+	7443	21	FSM	ENSG00000122729.19	ENST00000309951.8	7443	21	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_5	45.4502750266706	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTAAGTTCTCCTTATTTA	32379519	True	NA	NA	False	ATTAAA	-16	NA	32384642	32454769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300_32427437_32429418_32429504_32430417_32430575_32431718_32431844_32433727_32433833_32434558_32434702_32436249_32436398_32440464_32440588_32448895_32449082_32449997
transcript_14048.nic	chr1	+	703	3	ISM	ENSG00000230937.13	ENST00000429156.6	1007	5	-6	1930	-6	0	5prime_fragment	FALSE	canonical	3	143	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGGCAAAGAATCTTGC	209418092	True	NA	NA	False	NA	NA	NA	209428810	209430621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_209429089_209429180_209429409_209430424
transcript_140480.nic	chr9	+	1978	12	ISM	ENSG00000122729.19	ENST00000309951.8	7443	21	-25	26979	-2	-23042	5prime_fragment	FALSE	canonical	3	542	junction_5	48.8724093604379	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTAAACCGTAGCTTAC	32379494	True	NA	NA	False	AATAAA	-20	NA	32384617	32427790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_32384736_32405484_32405604_32407260_32407430_32408513_32408652_32418127_32418198_32418327_32418512_32419037_32419178_32420855_32421028_32423318_32423420_32424548_32424666_32425837_32425998_32427300
transcript_140484.known	chr9	-	4628	18	FSM	ENSG00000107201.11	ENST00000379883.3	4628	18	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_9	28.535899808043	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-32525534	True	NA	NA	False	TATAAA	-4	NA	32526196	32455301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32457419_32459370_32459515_32466289_32466442_32467761_32467933_32472974_32473066_32476982_32477132_32480218_32480355_32481339_32481498_32485174_32485280_32487470_32487634_32487944_32488204_32488733_32488888_32489343_32489452_32491300_32491421_32492390_32492539_32493760_32493943_32500804_32500940_32526060
transcript_140488.known	chr9	-	1361	4	FSM	ENSG00000165264.11	ENST00000379847.8	1361	4	0	0	0	0	multi-exon	FALSE	canonical	3	2698	junction_1	181.715895470558	11137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGAATTTTATTTTTA	-32560374	True	NA	NA	False	AATAAA	-14	NA	32573159	32553000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32553945_32558909_32558955_32570959_32571053_32572880
transcript_14049.nic	chr1	+	852	3	FSM	ENSG00000230937.13	ENST00000692388.1	843	3	-9	0	-6	0	multi-exon	FALSE	canonical	3	28	junction_2	62.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418092	True	NA	20	True	ACTAAA	-21	NA	209428810	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429089_209429180_209429409_209432203
transcript_140491.known	chr9	-	4131	3	FSM	ENSG00000197579.8	ENST00000360538.7	4131	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	24.5	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTACATTGGTAGTT	-32550338	True	NA	-8	True	AATAAA	-21	NA	32552586	32540543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32544327_32550773_32550969_32552433
transcript_140493.known	chr9	-	761	3	FSM	ENSG00000165264.11	ENST00000366466.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1302.5	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAGCAATTCCATGCA	-32560399	True	NA	-11	True	AATAAA	-8	NA	32573184	32553532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32553945_32558909_32558955_32572880
transcript_140494.known	chr9	-	666	3	FSM	ENSG00000165264.11	ENST00000350021.2	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	1483.5	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGGAAAACGGTATGGAAAA	-32560374	True	NA	22	True	NA	NA	NA	32573159	32553650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32553945_32570959_32571053_32572880
transcript_140495.known	chr9	+	318	2	FSM	ENSG00000235453.12	ENST00000635960.1	318	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTATTTTTGCATTATC	32551082	False	NA	12	True	AATAAA	-21	NA	32552542	32553010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32552651_32552800
transcript_140496.known	chr9	+	668	1	FSM	ENSG00000235453.12	ENST00000644531.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTTTTGCATTATCCT	32550884	True	NA	14	True	AATAAA	-23	NA	32552344	32553012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32552300_32553000
transcript_140497.known	chr9	+	1003	3	FSM	ENSG00000235453.12	ENST00000453396.5	1003	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	248.5	4956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGTTTATTTTTGCATT	NA	False	NA	9	True	AATAAA	-18	NA	32551143	32553007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32551694_32552233_32552480_32552800
transcript_140498.known	chr9	+	5342	2	FSM	ENSG00000188133.6	ENST00000342743.6	5342	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGTCCAGTTCACATA	32783501	True	NA	NA	False	AATAAA	-19	NA	32783539	32789201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_32783806_32784125
transcript_140500.known	chr9	-	1914	9	FSM	ENSG00000137074.20	ENST00000465003.6	1914	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	133.762324198558	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-32997698	True	NA	-13	True	AATAAA	-10	NA	33001583	32972619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_32997242_32997349_33001566
transcript_140503.known	chr9	-	2057	9	FSM	ENSG00000137074.20	ENST00000479656.6	2057	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	127.371933230991	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACAGTTGTATTCAGTTG	-32997728	True	NA	-15	True	AATAAA	-8	NA	33001613	32972621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_32997242_32997349_33001566
transcript_140504.known	chr9	-	1938	9	FSM	ENSG00000137074.20	ENST00000379819.6	1938	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	146.253151675443	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTAGGTGGAAACTATT	-32997735	True	NA	-2	True	AATAAA	-25	NA	33001620	32972752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_32997242_32997349_33001566
transcript_14051.nic	chr1	+	1018	3	NIC	ENSG00000230937.13	novel	1094	4	NA	NA	0	0	intron_retention	FALSE	canonical	3	42	junction_1	32.5	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418101	True	NA	20	True	ACTAAA	-21	NA	209428819	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_209429409_209431742_209431826_209432203
transcript_140520.known	chr9	-	2101	8	FSM	ENSG00000137074.20	ENST00000673487.1	2101	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	123.716100283624	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-33024080	True	NA	-30	True	AAAAAG	-32	NA	33025130	32972636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988125_32989758_32989896_33024803
transcript_140527.known	chr9	-	2099	8	FSM	ENSG00000137074.20	ENST00000494649.5	2099	8	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_7	109.197630235182	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997636	True	NA	-9	True	AATAAA	-14	NA	33001521	32972615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987843_32988078_32988125_32989758_32989896_33001332
transcript_140529.known	chr9	-	1938	8	FSM	ENSG00000137074.20	ENST00000467331.6	1938	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	141.319294001714	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATAAATTTGGATAAAAC	-33023802	False	NA	-30	True	AAAAAG	-32	NA	33024852	32972636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988125_32989758_32989896_33024803
transcript_14053.nic	chr1	+	651	2	ISM	ENSG00000230937.13	ENST00000429156.6	1007	5	-6	2998	-6	-1068	5prime_fragment	FALSE	canonical	3	153	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTATTTTGAAGCAAACT	209418092	True	NA	NA	False	NA	NA	NA	209428810	209429553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_209429089_209429180
transcript_140531.known	chr9	-	1345	8	FSM	ENSG00000137074.20	ENST00000463596.6	1345	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	139.478474676056	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997637	True	NA	-7	True	ATTAAA	-21	NA	33001522	32973375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001332
transcript_14054.known	chr1	+	523	2	FSM	ENSG00000230937.13	ENST00000444286.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGGCAAAGAATCTTGC	209429063	False	NA	NA	False	NA	NA	NA	209429082	209430621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209430424
transcript_14055.nic	chr1	+	936	2	FSM	ENSG00000230937.13	ENST00000691439.1	935	2	-1	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTCTGCCTCTATGTTT	209418100	True	NA	20	True	ACTAAA	-21	NA	209428818	209432549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209429409_209432203
transcript_14056.nnic	chr1	+	524	2	NNC	ENSG00000008118.10	novel	2456	13	NA	NA	0	-18477	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGCTTCCTATTTCTTAT	209583672	True	NA	NA	False	ATTAAA	-17	NA	209583713	209591436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_209583773_209590971
transcript_140562.known	chr9	-	1742	7	FSM	ENSG00000137074.20	ENST00000309615.8	1742	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	138.950130942324	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTCTGATGCATGGAAAGG	-32997710	True	NA	44	True	NA	NA	NA	33001595	32972706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001515
transcript_140564.known	chr9	-	1962	7	FSM	ENSG00000137074.20	ENST00000472896.6	1962	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	142.285413478996	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTTGTATTCAGTTGTT	-32997728	True	NA	-13	True	AATAAA	-10	NA	33001613	32972619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32989758_32989896_33001515
transcript_140575.known	chr9	-	1805	7	FSM	ENSG00000137074.20	ENST00000672438.1	1805	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	155.739543968626	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTTTCCCTGAGAATA	-32997743	True	NA	-44	True	AAAAAG	-18	NA	33001628	32972650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_33001566
transcript_14058.known	chr1	-	381	3	FSM	ENSG00000227591.6	ENST00000445272.6	422	3	33	8	33	2	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATTTTGTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	209675247	209661363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209661568_209662910_209663062_209675221
transcript_14059.known	chr1	+	876	2	FSM	ENSG00000123689.6	ENST00000367029.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTAATTCCTGAGAG	209675334	True	NA	10	True	AATAAA	-19	NA	209675411	209676390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209675550_209675652
transcript_140590.known	chr9	-	1394	5	FSM	ENSG00000137074.20	ENST00000673598.1	1394	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	143.991970262234	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCACTACTTTCTTTTTC	-32997692	True	NA	-54	True	AAAAAG	-8	NA	33001577	32972660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_33001566
transcript_140595.known	chr9	-	645	2	FSM	ENSG00000137074.20	ENST00000473270.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCCCATAATCTTGTTG	-33024060	True	NA	NA	False	NA	NA	NA	33025110	33015887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33016226_33024803
transcript_140596.known	chr9	-	397	2	FSM	ENSG00000137074.20	ENST00000489583.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATATTCACCCTCAGCGT	-33023937	False	NA	NA	False	NA	NA	NA	33024987	33019953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33020167_33024803
transcript_140597.known	chr9	-	1977	8	FSM	ENSG00000137074.20	ENST00000379817.7	1977	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.262074932528	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997743	True	NA	-9	True	AATAAA	-14	NA	33001628	32972615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_140598.known	chr9	-	2023	8	FSM	ENSG00000137074.20	ENST00000379825.7	2023	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	133.751063318299	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTTTTTGGGATAATAT	-32997743	True	NA	1	True	AATAAA	-24	NA	33001628	32972605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973689_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987847_32988082_32988130_32989758_32989896_33001566
transcript_140599.known	chr9	-	1846	7	FSM	ENSG00000137074.20	ENST00000436040.7	1846	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	145.419699108783	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTTGTATTCAGTTGTTT	-33024068	True	NA	-12	True	AATAAA	-11	NA	33025118	32972618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33025022
transcript_14060.known	chr1	-	4478	9	FSM	ENSG00000117595.12	ENST00000367021.8	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	9.7178958627884	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAAGACTACTTTCTACT	-209804074	True	NA	-2	True	AATAAA	-26	NA	209806142	209785616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209801239_209801417_209801971_209802044_209805946
transcript_140600.known	chr9	-	1814	8	FSM	ENSG00000137074.20	ENST00000485479.6	1814	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	143.319679780011	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTTCTTTTTCCCTGAGA	-33024015	True	NA	-47	True	AAAAAG	-15	NA	33025065	32972653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988091_32988125_32989758_32989896_33024999
transcript_140601.known	chr9	-	1068	7	FSM	ENSG00000137074.20	ENST00000476858.6	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	112.724837054169	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTCTATTATTGAGTGG	-32997756	True	NA	-7	True	ATTAAA	-21	NA	33001641	32973375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32989758_32989896_33001566
transcript_140602.known	chr9	-	1740	8	FSM	ENSG00000137074.20	ENST00000397172.8	1740	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	136.487272337768	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATTCAGTTGTTTTTT	-32997722	True	NA	-9	True	AATAAA	-14	NA	33001607	32972615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987759_32987847_32988082_32988130_32989758_32989896_33001566
transcript_140603.known	chr9	-	2022	8	FSM	ENSG00000137074.20	ENST00000483148.6	2022	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	121.435461989369	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTTTCCCTGAGAATAAA	-32997702	True	NA	-42	True	AAAAAG	-20	NA	33001587	32972648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001332
transcript_140604.known	chr9	-	2032	7	FSM	ENSG00000137074.20	ENST00000672286.1	2032	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	72.3642407086078	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTTAAGTAGGTGGAAACT	-32997702	True	NA	-5	True	AATAAA	-22	NA	33001587	32972755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32973653_32974457_32974562_32984630_32984858_32985970_32986031_32987543_32988130_32989758_32989896_33001566
transcript_140605.known	chr9	-	684	6	FSM	ENSG00000137074.20	ENST00000478279.6	684	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	84.9978823265615	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTACCACGCCATTCCG	-32997734	True	NA	NA	False	NA	NA	NA	33001619	32984658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_32984858_32985970_32986031_32987543_32987732_32988082_32988130_32989758_32989896_33001566
transcript_140612.known	chr9	+	2319	9	FSM	ENSG00000086061.16	ENST00000330899.5	2319	9	0	0	0	0	multi-exon	FALSE	canonical	3	1963	junction_5	122.308779325116	3827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCACTACAGGCTTT	32987745	True	NA	14	True	AATATA	-22	NA	33025272	33039907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33025384_33026474_33026617_33026812_33026991_33029884_33029990_33030439_33030668_33034215_33034331_33036573_33036690_33037014_33037116_33038684
transcript_140617.known	chr9	+	3752	4	FSM	ENSG00000233554.6	ENST00000654325.1	3752	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAGAAAATAGTGTAAGTC	33166937	True	NA	NA	False	AATATA	-7	NA	33166947	33182865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33167047_33177419_33177470_33178895_33178958_33179324
transcript_140621.known	chr9	-	1396	8	FSM	ENSG00000107262.26	ENST00000379707.7	1396	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	207.086888990676	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCTCCTATCTGTTT	-33258298	True	NA	-33	True	AATGAA	-23	NA	33264720	33255048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262104_33262247_33262701_33262831_33264223
transcript_140627.known	chr9	-	1128	7	FSM	ENSG00000107262.26	ENST00000379704.7	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	445	junction_6	25.4389246802786	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGTCTCTGTGGTTGT	-33258149	False	NA	-10	True	AGTAAA	-18	NA	33264571	33255025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33255309_33255864_33255928_33256800_33256909_33258919_33259034_33261086_33261170_33262701_33262831_33264223
transcript_14063.known	chr1	-	4256	7	FSM	ENSG00000117595.12	ENST00000542854.5	4256	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	39.53655130242	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATTAGAAGACTACTT	-209804107	True	NA	-8	True	AATAAA	-20	NA	209806175	209785622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_209788645_209789666_209789786_209790494_209790888_209792268_209792428_209795289_209795419_209796347_209796553_209805946
transcript_140635.known	chr9	+	1901	8	FSM	ENSG00000086065.14	ENST00000223500.9	1901	8	0	0	0	0	multi-exon	FALSE	canonical	3	766	junction_1	55.8120022202817	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTAGAAGTCTCTGTA	33252155	True	NA	NA	False	AATAAA	-16	NA	33265048	33282070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33278112_33278226_33280808
transcript_140643.known	chr9	+	1957	7	FSM	ENSG00000086065.14	ENST00000419016.6	1957	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_6	319.747122304834	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTTTGTAGAAGTCTCTGT	33264848	False	NA	NA	False	AATAAA	-15	NA	33264878	33282069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33265148_33266009_33266115_33267852_33267900_33270622_33270717_33271151_33271224_33276455_33276565_33280808
transcript_140647.known	chr9	+	3513	16	FSM	ENSG00000086102.19	ENST00000318524.6	3513	16	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_15	22.4267697183522	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCATATTTATTGTAC	33286906	True	NA	15	True	AATAAA	-15	NA	33290544	33348723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33290598_33294419_33295428_33301262_33301422_33303190_33303269_33307193_33307300_33311105_33311178_33313653_33313794_33318730_33318831_33318909_33319128_33328580_33328679_33332471_33332503_33338509_33338590_33342745_33342855_33344068_33344189_33347037_33347118_33347662
transcript_140649.nnic	chr9	+	794	3	NNC	ENSG00000086102.19	novel	3513	16	NA	NA	-37	-40074	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCCATGGCCAGTTTC	33286836	True	NA	NA	False	AATAAA	-15	NA	33290474	33292583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_33290598_33291420_33291579_33292070
transcript_14065.known	chr1	+	8481	12	FSM	ENSG00000117597.18	ENST00000491415.7	8481	12	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	7.05117070169648	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTTTGGAGTACTGATT	209826223	True	NA	5	True	ATTAAA	-19	NA	209827971	209857565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209828171_209830107_209830148_209830802_209831044_209833184_209833359_209835074_209835164_209836800_209837212_209838908_209839129_209840852_209841056_209842264_209842448_209842582_209842696_209843450_209843697_209851203
transcript_140652.known	chr9	-	1825	6	FSM	ENSG00000165272.16	ENST00000297991.6	1825	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	2.33238075793812	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTTGTGCAAATATC	-33447118	True	NA	-13	True	AATAAA	-19	NA	33447593	33441159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33442212_33442300_33442519_33442851_33442971_33443320_33443459_33443765_33443893_33447422
transcript_140653.known	chr9	-	4834	26	FSM	ENSG00000165271.17	ENST00000297990.9	4834	26	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_19	19.2210717703254	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCGTGTCCTTCCTAG	-33468904	True	NA	-1	True	NA	NA	NA	33473924	33461352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33462814_33463032_33463135_33463246_33463442_33463830_33463921_33464036_33464162_33464878_33464977_33465206_33465360_33465733_33465898_33466070_33466226_33466307_33466426_33466568_33466710_33466911_33466988_33467113_33467263_33467393_33467517_33467690_33467869_33468029_33468146_33468320_33468423_33468507_33468567_33468751_33468873_33468957_33469122_33469206_33469342_33469498_33469668_33470011_33470192_33472003_33472121_33472205_33472413_33473788
transcript_140661.nic	chr9	+	1766	9	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	-449	31786	-449	1669	5prime_fragment	FALSE	canonical	3	11	junction_6	3.89711431702997	55	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	33523537	True	NA	NA	False	AAAAAG	-45	NA	33523801	33541227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_140662.nic	chr9	+	1545	7	ISM	ENSG00000230453.10	ENST00000290943.10	3773	16	-592	31806	-449	1637	5prime_fragment	FALSE	canonical	1	2	junction_6	7.44796765716811	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATTGAAAAAAAGAAAAG	33523537	True	NA	NA	False	AAAAAG	-13	NA	33523801	33541195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_33524696_33528726_33528842_33528999_33529174_33533438_33533546_33534369_33534508_33536877_33536946_33541146
transcript_140664.known	chr9	+	536	6	ISM	ENSG00000230453.10	ENST00000684830.1	4160	19	9235	31786	44	1669	internal_fragment	FALSE	canonical	3	11	junction_3	3.86781592116274	2	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGACACTTGAGTATCTC	33533468	False	NA	NA	False	AAAAAG	-45	NA	33533485	33541227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_33533546_33534369_33534508_33536877_33536946_33539448_33539503_33540077_33540213_33541146
transcript_140671.nnic	chr9	+	1369	5	NNC	ENSG00000107341.5	novel	4477	5	NA	NA	-649	-2412	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.029183146132	436	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGAGCACTTGGTTGCT	33816480	True	NA	16	True	AATAAA	-18	NA	33816510	33917987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_33816590_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_140672.known	chr9	+	4477	5	FSM	ENSG00000107341.5	ENST00000263228.4	4477	5	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_4	31.2999600638723	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATGACCCTCTTCTTTT	33816739	True	NA	35	True	AATAAA	-36	NA	33817159	33920399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33817935_33886880_33886968_33900173_33900272_33911963_33912099_33917017
transcript_140677.known	chr9	+	804	5	FSM	ENSG00000010438.17	ENST00000361005.10	804	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.12132034355964	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGTCTGTGCCGGCTC	33750601	True	NA	16	True	AATAAA	-16	NA	33750678	33799231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33750728_33796642_33796803_33797828_33798083_33798485_33798623_33799027
transcript_140681.known	chr9	+	920	6	FSM	ENSG00000010438.17	ENST00000342836.9	920	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.01996015920445	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCTGTGTCTGTGCCGGCT	33750612	True	NA	15	True	AATAAA	-15	NA	33750689	33799230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_33750728_33794745_33794874_33796642_33796803_33797828_33798083_33798485_33798623_33799027
transcript_140682.known	chr9	-	4275	29	FSM	ENSG00000137073.24	ENST00000379238.7	4275	29	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_21	38.6693861933627	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTCTCTGTGTGGTGTG	-34043835	True	NA	-7	True	AATAAA	-15	NA	34048887	33921692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933629_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33971650_33971755_33973182_33973238_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_140684.known	chr9	-	4079	27	FSM	ENSG00000137073.24	ENST00000379239.9	4079	27	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	68.6172063400803	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCCAATCCCCACCTAATA	-34043816	True	NA	-43	True	NA	NA	NA	34048868	33921728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_33922600_33922686_33922879_33922965_33923034_33923185_33923294_33923378_33923479_33923794_33924001_33924205_33924285_33926616_33926665_33926988_33927081_33927796_33927993_33932561_33932629_33933489_33933647_33935838_33935879_33941648_33941863_33943419_33943590_33944364_33944640_33948373_33948588_33953284_33953475_33956078_33956147_33960825_33960879_33963725_33963792_33986759_33986838_33988972_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_140685.nic	chr9	-	485	5	ISM	ENSG00000137073.24	ENST00000683084.1	4165	25	-30	67183	-10	5417	5prime_fragment	FALSE	canonical	3	197	junction_4	24.4169510791171	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAATAGAGAGAAGAAAAG	-34043865	True	NA	-41	True	AAAAAG	-31	NA	34048917	33989063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_33989127_33996222_33996334_33998786_33998865_34017049_34017190_34048824
transcript_140691.known	chr9	-	3592	9	FSM	ENSG00000198876.13	ENST00000361264.9	3592	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_7	23.576670142325	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGTGTGAGTGAGTATT	-34123481	True	NA	-3	True	AATAAA	-16	NA	34126698	34086386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34088509_34089411_34089591_34093285_34093449_34096715_34096782_34098323_34098518_34106433_34106495_34107358_34107566_34125022_34125278_34126353
transcript_140702.known	chr9	+	2705	7	FSM	ENSG00000165006.14	ENST00000297661.9	2705	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_4	37.9286611065212	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGTGTGATAACTTC	34173629	True	NA	9	True	AATAAA	-14	NA	34179042	34252523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34179241_34220907_34220949_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_140708.known	chr9	+	1753	6	FSM	ENSG00000165006.14	ENST00000626262.2	1753	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	108.8154400809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGGTGGGGAAGATTCGG	34173631	True	NA	-78	True	NA	NA	NA	34179044	34251698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34179241_34220907_34220949_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_140709.known	chr9	+	2029	6	FSM	ENSG00000165006.14	ENST00000625521.2	2029	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	101.749889434829	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCCTGGCCTAGTTGCTG	34173591	True	NA	74	True	NA	NA	NA	34179004	34251850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34179241_34234215_34234341_34241184_34242109_34249778_34249962_34250657_34250760_34251391
transcript_140714.nnic	chr9	+	840	3	NNC	ENSG00000165006.14	novel	2524	6	NA	NA	8	-28278	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	149.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGAATTCTTAACCAAA	34173599	True	NA	NA	False	NA	NA	NA	34179012	34223420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_34179241_34220907_34221416_34223316
transcript_140718.nic	chr9	-	549	2	ISM	ENSG00000186638.17	ENST00000402558.7	6295	13	-23	58629	-23	113	5prime_fragment	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGGTTTGAAATGTGCA	-34328472	True	NA	NA	False	AATAAA	-18	NA	34329291	34311008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_34311372_34329105
transcript_140719.known	chr9	+	998	5	FSM	ENSG00000164978.18	ENST00000379158.7	998	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	36.0936282465479	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGTCCTTCTAACCTGTT	34327712	True	NA	23	True	AATAAA	-16	NA	34329568	34343699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34336228_34336342_34338712_34338848_34339023_34339167_34343123
transcript_140721.known	chr9	+	1002	5	FSM	ENSG00000164978.18	ENST00000379155.9	1002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36.8874978820738	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34336299_34336342_34338712_34338848_34339023_34339167_34343123
transcript_140726.known	chr9	+	825	3	FSM	ENSG00000164978.18	ENST00000618590.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	41.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34339023_34339167_34343123
transcript_140727.known	chr9	+	960	4	FSM	ENSG00000164978.18	ENST00000346365.8	960	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	13.0979218029257	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTGTTTATTTCT	34327649	True	NA	35	True	AATAAA	-28	NA	34329505	34343711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34329600_34338712_34338848_34339023_34339167_34343123
transcript_140728.known	chr9	-	6447	2	FSM	ENSG00000164976.9	ENST00000297625.8	6447	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTGTTTTATTGATTAA	-34375836	True	NA	NA	False	AATAAA	-21	NA	34376898	34366665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34373007_34376792
transcript_140729.known	chr9	-	596	5	FSM	ENSG00000164972.14	ENST00000379127.1	596	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	11.9451873154003	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381406	True	NA	2	True	AATAAA	-20	NA	34381560	34379018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34379182_34379645_34379733_34380896_34381132_34381368_34381445_34381525
transcript_140732.known	chr9	-	712	4	FSM	ENSG00000164972.14	ENST00000379133.7	712	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11.2644968324772	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381446	True	NA	2	True	AATAAA	-20	NA	34381600	34379018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34379182_34379645_34379733_34380901_34381132_34381368
transcript_140734.nnic	chr9	-	743	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	702	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	11.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34380675	False	154	2	True	AATAAA	-20	NA	34380829	34379018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_34379182_34379645_34379733_34380336
transcript_140735.nnic	chr9	-	390	3	NNC	ENSG00000164972.14	novel	648	4	NA	NA	700	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	14.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34380677	False	154	2	True	AATAAA	-20	NA	34380831	34379018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_34379182_34379645_34379733_34380691
transcript_140736.nnic	chr9	-	472	3	NIC	ENSG00000164972.14	novel	712	4	NA	NA	10	0	intron_retention	FALSE	canonical	2	5	junction_2	13.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34381436	True	NA	2	True	AATAAA	-20	NA	34381590	34379018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_34379182_34379645_34379733_34381368
transcript_140737.known	chr9	-	293	2	FSM	ENSG00000164972.14	ENST00000481295.5	293	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCCTGTGTCCTTA	-34379621	False	154	2	True	AATAAA	-20	NA	34379775	34379018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34379182_34379645
transcript_140740.known	chr9	+	656	4	FSM	ENSG00000122735.16	ENST00000442556.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACACCTTTAATTGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	34513111	34520984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34513192_34514393_34514543_34514639_34514740_34520657
transcript_140742.nnic	chr9	+	731	4	NNC	ENSG00000122735.16	novel	2598	20	NA	NA	659	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.942809041582063	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCACACCTTTAATTGTGC	NA	False	NA	NA	False	AATAAA	-17	NA	34513802	34520984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_34513958_34514393_34514543_34514639_34514740_34520657
transcript_140749.known	chr9	-	1028	2	FSM	ENSG00000168913.7	ENST00000399775.3	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGAGGTTTTCTTCTCTT	-34521325	True	NA	-5	True	AATAAA	-17	NA	34522990	34521042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34521857_34522776
transcript_14075.known	chr1	+	2997	9	FSM	ENSG00000143469.20	ENST00000367019.5	2997	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	7.1239034243875	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATCTTGTGCCTTTCAT	209935888	True	NA	NA	False	GATAAA	-15	NA	209938173	210162223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_209938278_209952708_209952757_210013632_210013798_210021038_210021255_210094321_210094594_210100011_210100462_210155720_210155911_210159420_210159478_210160728
transcript_140751.known	chr9	-	1092	2	FSM	ENSG00000164967.10	ENST00000297613.4	1092	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCAGCCTGCTATGTGGAG	-34608414	False	3690	-1	True	AATAAA	-26	NA	34612104	34610485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34611333_34611859
transcript_140752.known	chr9	-	872	2	FSM	ENSG00000164967.10	ENST00000378959.9	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	1400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCTCTACTCAGCCTGC	-34608407	False	3690	-10	True	AATAAA	-17	NA	34612097	34610494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34611333_34612063
transcript_140757.known	chr9	-	828	7	FSM	ENSG00000137100.16	ENST00000259632.12	828	7	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_6	12.495554765151	2801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGTGCTGGCTTCTTGG	-34616805	True	NA	1	True	AATAAA	-18	NA	34620495	34613545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34613872_34614041_34614102_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_140758.known	chr9	-	899	7	FSM	ENSG00000137100.16	ENST00000341694.6	899	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	101.725802473556	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGGAGTGTGCTGGCTT	-34616784	True	NA	-4	True	AATAAA	-13	NA	34620474	34613550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34613872_34614041_34614199_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_140759.known	chr9	-	713	6	FSM	ENSG00000137100.16	ENST00000477738.6	713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.921062585839	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCCCCCCAATCAGTGT	-34616778	True	NA	-57	True	NA	NA	NA	34620468	34613603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34613902_34614709_34614769_34616029_34616114_34617884_34617972_34618675_34618761_34620368
transcript_140760.known	chr9	-	864	4	FSM	ENSG00000147955.18	ENST00000680244.1	864	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	581.764175208095	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTTTCCATAGCTCCAC	-34628375	True	NA	NA	False	NA	NA	NA	34637793	34635317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635641_34636996_34637090_34637219_34637421_34637546
transcript_140762.known	chr9	-	1672	4	FSM	ENSG00000147955.18	ENST00000277010.9	1672	4	0	0	0	0	multi-exon	TRUE	canonical	3	1026	junction_2	163.399986400108	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628369	True	NA	-16	True	AATAAA	-20	NA	34637787	34634721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635859_34636996_34637090_34637219_34637421_34637546
transcript_140763.known	chr9	-	1582	4	FSM	ENSG00000147955.18	ENST00000353468.4	1582	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	593.95529199502	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTGTGTCTGAGCA	-34628326	True	NA	-16	True	AATAAA	-20	NA	34637744	34634721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635859_34636996_34637090_34637266_34637421_34637546
transcript_140764.known	chr9	-	1842	3	FSM	ENSG00000147955.18	ENST00000497006.2	1842	3	0	0	0	0	multi-exon	FALSE	canonical	3	1162	junction_1	129	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGATCTGTTCCATCT	NA	False	NA	-33	True	AATAAA	-3	NA	34637844	34634738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635859_34636996_34637421_34637546
transcript_140765.known	chr9	-	840	3	FSM	ENSG00000147955.18	ENST00000477726.1	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	684	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCCAAACACAGAGACCCAT	-34628391	True	NA	NA	False	NA	NA	NA	34637809	34635482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34635859_34637219_34637421_34637546
transcript_140767.known	chr9	+	1722	13	FSM	ENSG00000137070.19	ENST00000441545.7	1722	13	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_1	6.75102872819313	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATCCAATGCTGCTTT	34651960	True	NA	29	True	AATAAA	-37	NA	34652184	34661902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34652234_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_140771.known	chr9	+	1728	13	FSM	ENSG00000137070.19	ENST00000318041.13	1728	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.16836716989523	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTCAGAAATTATTATCCA	34653882	True	NA	19	True	AATAAA	-27	NA	34653934	34661892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34654000_34655217_34655318_34655604_34655666_34656738_34656909_34657034_34657150_34657302_34657336_34657420_34657588_34658519_34658684_34659758_34659901_34660273_34660394_34660503_34660601_34660853_34660937_34661481
transcript_140783.known	chr9	+	1756	11	FSM	ENSG00000213930.12	ENST00000378842.8	1756	11	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_5	23.5034040087814	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGTAGGGAGTGTGTAGG	34643646	True	NA	NA	False	GGGGCT	-7	NA	34646674	34651035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34646787_34647088_34647259_34647491_34647568_34647656_34647706_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_1408.nnic	chr1	+	1278	9	NIC	ENSG00000204859.13	novel	2347	11	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	35.1459012546271	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCAGCCTGACAGTCTGTT	6578517	True	NA	16	True	AATAAA	-24	NA	6579995	6589280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_6580071_6585918_6586031_6586694_6586788_6587204_6587292_6587477_6587633_6588059_6588197_6588277_6588443_6588755_6588845_6588915
transcript_140802.known	chr9	+	1164	9	FSM	ENSG00000213930.12	ENST00000554550.5	1164	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	96.1193919040274	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAATTTGGGCAGATA	34643607	True	NA	-40	True	NA	NA	NA	34646635	34650529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34646787_34647088_34647259_34647831_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_140813.known	chr9	+	1712	8	FSM	ENSG00000213930.12	ENST00000554638.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	22.2948699141707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCATTAATAAAACTGTGC	34643652	True	NA	-20	True	NA	NA	NA	34646680	34650549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34646787_34647088_34647962_34648114_34648172_34648333_34648457_34648761_34648895_34648997_34649082_34649409_34649565_34650368
transcript_140830.known	chr9	-	338	4	FSM	ENSG00000187186.15	ENST00000544078.2	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_3	30.092450142113	1008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAAGCCCACCGTACTGACC	-34664410	True	NA	-17	True	ATTAAA	-10	NA	34666028	34665031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34665191_34665313_34665374_34665612_34665681_34665977
transcript_140834.known	chr9	+	1410	3	FSM	ENSG00000230074.4	ENST00000654838.1	1410	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTTTTTTTGAGGCAG	34665151	True	NA	NA	False	AAAAAG	-26	NA	34665606	34681981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34665768_34678095_34678269_34680905
transcript_140840.known	chr9	-	465	3	FSM	ENSG00000187186.15	ENST00000416454.5	465	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_2	35	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCGTACTGACCTCCT	-34664410	True	NA	-13	True	ATTAAA	-14	NA	34666028	34665027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34665374_34665612_34665681_34665977
transcript_140847.known	chr9	-	3264	5	FSM	ENSG00000261215.1	ENST00000564224.1	3264	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	91.1300581586559	398	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTGAGTATAATCTCCAA	-34664411	True	NA	NA	False	AATAAA	-18	NA	34666029	34661902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_34662080_34662283_34665191_34665313_34665374_34665612_34665681_34665977
transcript_140848.known	chr9	+	665	3	FSM	ENSG00000230074.4	ENST00000434627.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGACCAATCAGGTGTGT	34665209	True	NA	NA	False	NA	NA	NA	34665664	34681298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34665768_34678099_34678269_34680905
transcript_140849.known	chr9	+	2391	4	FSM	ENSG00000137094.16	ENST00000312316.9	2391	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	22.3059533657621	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGAGCAGGAGCAACAA	34987242	True	NA	18	True	AATAAA	-18	NA	34989693	34998431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34989832_34993199_34993445_34996264_34996867_34997025
transcript_14085.nnic	chr1	-	717	4	NNC	ENSG00000203706.8	novel	726	2	NA	NA	148	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.71404520791032	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210233772	True	NA	2	True	AATAAA	-35	NA	210233896	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_210231772_210232189_210232247_210232697_210232780_210233634
transcript_140850.known	chr9	+	2818	4	FSM	ENSG00000137094.16	ENST00000454002.6	2818	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	84.3682404699778	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGCAGGAGCAACAAAC	34987798	False	NA	20	True	AATAAA	-20	NA	34990249	34998433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34990813_34993199_34993445_34996264_34996867_34997025
transcript_140851.known	chr9	+	3068	4	FSM	ENSG00000137094.16	ENST00000545841.5	3068	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	89.5408038581046	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCTAGGTTCAAGCGAC	34989771	True	NA	NA	False	NA	NA	NA	34990265	34998900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_34990612_34993199_34993445_34996264_34996867_34997025
transcript_140852.nic	chr9	+	2346	4	NIC	ENSG00000137094.16	novel	5228	3	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	87.6596955403236	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATCTGAGCAGGAGCAA	34991150	True	NA	15	True	AATAAA	-15	NA	34991320	34998428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_34991417_34993199_34993445_34996264_34996867_34997025
transcript_140855.known	chr9	-	3382	17	FSM	ENSG00000165280.18	ENST00000417448.2	3382	17	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_16	692.294055003905	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATAAACGTTGGGTCAAA	-35069327	False	NA	-40	True	NA	NA	NA	35072205	35056587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35071756
transcript_140856.known	chr9	-	3746	17	FSM	ENSG00000165280.18	ENST00000358901.11	3746	17	0	0	0	0	multi-exon	FALSE	canonical	2	2023	junction_3	239.2966255508	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAGTATTGAATTTTTTT	-35031178	True	NA	-11	True	ATTAAA	-28	NA	35072625	35056063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35057223_35057375_35057531_35059063_35059220_35059492_35059802_35060312_35060526_35060800_35060924_35061014_35061180_35061576_35061690_35062002_35062139_35062216_35062351_35062977_35063081_35064153_35064286_35065250_35065382_35066674_35066818_35067890_35068064_35068250_35068363_35072336
transcript_140860.nic	chr9	-	2464	15	NIC	ENSG00000221829.10	novel	2556	14	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_14	65.1555438773953	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077167	True	NA	-40	True	AGTAAA	-13	NA	35080045	35073838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440_35079536_35079730
transcript_140863.known	chr9	-	2556	14	FSM	ENSG00000221829.10	ENST00000378643.8	2556	14	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	42.1925706464003	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGTCTGCCTACTACATA	-35077064	True	NA	-40	True	AGTAAA	-13	NA	35079942	35073838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35074217_35074370_35074495_35074926_35075083_35075278_35075326_35075464_35075755_35075961_35076029_35076431_35076584_35076723_35076871_35076970_35077102_35077263_35077400_35078140_35078344_35078604_35078737_35079150_35079242_35079440
transcript_140874.known	chr9	-	2464	12	FSM	ENSG00000165282.14	ENST00000361778.6	2464	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_11	33.1876707167482	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGTGTCTGAGATGTGGG	-35096591	False	25619	NA	False	AATAAA	-15	NA	35096601	35088688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35091292_35092542_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096560
transcript_140877.known	chr9	-	4112	11	FSM	ENSG00000165282.14	ENST00000378617.4	4112	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	39.9399549323732	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCTGAGATGTGGGG	-35096581	False	25619	NA	False	AATAAA	-16	NA	35096591	35088687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35089222_35089379_35089451_35090065_35090281_35090465_35090673_35091239_35092768_35093029_35093210_35093420_35093581_35093900_35094025_35094215_35094360_35095054_35095567_35096154
transcript_14088.nnic	chr1	-	461	3	NNC	ENSG00000203706.8	novel	591	2	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234148	False	NA	2	True	AATAAA	-35	NA	210234180	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_210231772_210232189_210232237_210234082
transcript_14089.nnic	chr1	-	623	3	NNC	ENSG00000203706.8	novel	726	2	NA	NA	160	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210233760	True	NA	2	True	AATAAA	-35	NA	210233884	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_210231772_210232189_210232247_210233634
transcript_140897.known	chr9	-	1365	10	FSM	ENSG00000165283.16	ENST00000356493.10	1365	10	0	0	0	0	multi-exon	FALSE	canonical	3	1498	junction_9	210.517058925792	5699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCATTTTTGTCTTCAAG	-35077512	True	NA	NA	False	NA	NA	NA	35103131	35099777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35100173_35100597_35100727_35100931_35101012_35101134_35101280_35101425_35101561_35101709_35101812_35101903_35101963_35102094_35102195_35102685_35102824_35103049
transcript_140899.known	chr9	-	2998	9	FSM	ENSG00000005238.20	ENST00000322813.10	2998	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_8	7.07879756738388	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTACTTTTGTTGTTGTT	-35115413	True	NA	-5	True	AATAAA	-25	NA	35115862	35104116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35105375_35105681_35105858_35105940_35106010_35106251_35106411_35106537_35106644_35106832_35106892_35107380_35108350_35108593_35108738_35115804
transcript_14090.nnic	chr1	-	669	3	NNC	ENSG00000203706.8	novel	726	2	NA	NA	146	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210233774	True	NA	2	True	AATAAA	-35	NA	210233898	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_210231772_210232189_210232279_210233634
transcript_140902.nic	chr9	+	1843	7	ISM	ENSG00000198722.15	ENST00000634487.1	5063	42	-133	144000	-21	16704	5prime_fragment	FALSE	canonical	3	150	junction_5	11.6285090283416	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAACCAAGTGTGA	35158582	True	NA	NA	False	NA	NA	NA	35161970	35260054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_35162306_35228014_35228045_35231119_35231220_35236468_35236587_35237702_35237827_35243290_35243365_35258992
transcript_140907.nnic	chr9	-	1437	7	NNC	ENSG00000137101.14	novel	1531	9	NA	NA	1162	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_5	4.84481395124954	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCACGTGTTAGTCTCATG	-35617098	True	NA	-27	True	TTTAAA	-4	NA	35617191	35609981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35610301_35610601_35610754_35611803_35611920_35612847_35612994_35615942_35616279_35616599_35616690_35616913
transcript_14091.nnic	chr1	-	496	3	NNC	ENSG00000203706.8	novel	591	2	NA	NA	-130	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234145	True	NA	2	True	AATAAA	-35	NA	210234177	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_210231772_210232189_210232279_210234086
transcript_140919.known	chr9	-	1317	5	NNC	ENSG00000137078.10	novel	1222	5	NA	NA	-19	-8	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	23.5199383502593	126	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGTGTTTAGATTTTTA	-35648183	False	2767	-19	True	AATAAA	-8	NA	35650950	35649302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35650082_35650183_35650246_35650356_35650415_35650416_35650638_35650753
transcript_140921.known	chr9	-	1222	5	FSM	ENSG00000137078.10	ENST00000259608.8	1222	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	7.34846922834953	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGATTTTTACCTAGAAG	-35648164	False	2767	-11	True	AATAAA	-16	NA	35650931	35649294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35650082_35650183_35650246_35650356_35650416_35650501_35650638_35650753
transcript_140929.known	chr9	-	3678	9	FSM	ENSG00000137135.18	ENST00000378387.4	3678	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	23.7562491778479	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTCACATCTACCTGGG	-35662381	True	NA	0	True	ATTAAA	-18	NA	35665195	35659342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_14093.known	chr1	-	591	2	FSM	ENSG00000203706.8	ENST00000475406.5	591	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210232940	False	NA	2	True	AATAAA	-35	NA	210232972	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_210231772_210232697
transcript_14094.known	chr1	-	726	2	FSM	ENSG00000203706.8	ENST00000437764.5	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234012	False	NA	2	True	AATAAA	-35	NA	210234044	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_210231772_210233634
transcript_14095.known	chr1	-	413	2	FSM	ENSG00000203706.8	ENST00000480052.1	413	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTGAAGGTGTTTTT	-210234015	False	NA	2	True	AATAAA	-35	NA	210234047	210231455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_210231772_210233950
transcript_140953.known	chr9	+	1173	6	FSM	ENSG00000159884.12	ENST00000378409.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	43.4649283906002	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAACATAAAAATAGCCACA	35656557	True	NA	NA	False	AATAAA	-16	NA	35658289	35661499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745_35660859_35660939
transcript_140956.known	chr9	+	804	6	FSM	ENSG00000159884.12	ENST00000327351.6	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	76.6540279437421	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCATGATGGAGTGCTC	35656584	True	NA	5	True	ACTAAA	-10	NA	35658316	35661177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660765_35660859_35660939
transcript_140960.known	chr9	+	1264	5	FSM	ENSG00000159884.12	ENST00000426546.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	17.6405073623181	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCACATTTACAAAGCTG	35656559	True	NA	NA	False	AATAAA	-28	NA	35658291	35661511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660745
transcript_140961.known	chr9	+	899	5	FSM	ENSG00000159884.12	ENST00000378407.7	899	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	77.6768144300473	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGAGTGCTCCTGTGTGTT	35656571	True	NA	14	True	ACTAAA	-19	NA	35658303	35661186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35660773
transcript_140962.nnic	chr9	+	630	5	NNC	ENSG00000159884.12	novel	1264	5	NA	NA	-3	4422	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	76.8126779900297	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAACTGTGGTTTTTATCT	35656554	True	NA	NA	False	AATAAA	-24	NA	35658286	35665933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556_35660648_35665806
transcript_140964.known	chr9	+	1016	4	FSM	ENSG00000159884.12	ENST00000378406.5	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	5.8878405775519	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTGCTCCTGTGTGTTT	35656581	True	NA	15	True	ACTAAA	-20	NA	35658313	35661187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400_35660462_35660556
transcript_140970.known	chr9	+	1324	3	FSM	ENSG00000159884.12	ENST00000421582.2	1324	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	7	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTCATAGCAAAACTGAGA	35656584	True	NA	NA	False	NA	NA	NA	35658316	35661403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35658486_35658575_35658728_35660400
transcript_140972.known	chr9	-	2862	8	FSM	ENSG00000137135.18	ENST00000475323.5	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	107.40805275173	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGGACTACTGTCTTTATT	-35662378	True	NA	-2	True	NA	NA	NA	35665192	35658876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35659174_35660093_35662003_35662178_35662268_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35665031
transcript_140973.known	chr9	-	4498	12	FSM	ENSG00000137135.18	ENST00000490638.5	4498	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	118.123272211773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACTACTGTCTTTATTTT	-35675847	False	NA	0	True	NA	NA	NA	35675866	35658874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35659174_35660093_35660968_35661712_35662003_35662178_35662268_35662511_35662742_35662945_35663075_35663321_35663393_35664007_35664127_35664371_35664493_35664755_35664851_35669583_35669709_35673810
transcript_140974.known	chr9	+	697	7	FSM	ENSG00000107159.14	ENST00000493245.1	697	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.21455025366432	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATAAATATTTATAATAAA	35676119	False	NA	NA	False	AAGAAA	-8	NA	35676162	35681138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35676207_35677789_35677857_35679184_35679343_35679853_35679999_35680112_35680140_35680752_35680835_35680964
transcript_140975.known	chr9	-	1182	9	FSM	ENSG00000198467.16	ENST00000378292.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	172.649029826408	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTGTTGGCAATGGA	-35690037	False	NA	0	True	AATAAA	-38	NA	35690056	35681992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_140979.known	chr9	-	1018	9	FSM	ENSG00000198467.16	ENST00000329305.6	1018	9	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_4	112.665364575809	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGGCCCTTTAATCCT	-35676452	True	NA	-21	True	AATAAA	-17	NA	35689913	35682013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35682164_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_140980.known	chr9	-	1190	9	FSM	ENSG00000198467.16	ENST00000645482.3	1190	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	199.280228259103	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCATGCTGTTTTCCTGC	-35676464	True	NA	-13	True	AATAAA	-13	NA	35689925	35682931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35684731_35684808_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_140981.known	chr9	-	1185	9	FSM	ENSG00000198467.16	ENST00000647435.1	1185	9	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	223.560953656939	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTCTCCATGCTGTTTT	-35676464	True	NA	-18	True	AATAAA	-8	NA	35689925	35682936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35683242_35684245_35684316_35684487_35684551_35685063_35685140_35685268_35685340_35685433_35685552_35685646_35685781_35689145_35689272_35689703
transcript_140982.known	chr9	-	8623	57	FSM	ENSG00000137076.21	ENST00000314888.10	8623	57	0	0	0	0	multi-exon	TRUE	canonical	3	231	junction_48	46.8515859890984	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTGTAAGTGTCTGAG	-35728601	True	NA	NA	False	NA	NA	NA	35732195	35696947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35697917_35698043_35698173_35698322_35698506_35698616_35698680_35698807_35698934_35699031_35699157_35699355_35699462_35699973_35700082_35700190_35700377_35703559_35703677_35703774_35703901_35703990_35704175_35704331_35704499_35704668_35704816_35705550_35705671_35705749_35705852_35705961_35706112_35706195_35706367_35706449_35706552_35706767_35706901_35707071_35707254_35707347_35707489_35707730_35707893_35708340_35708485_35710560_35710684_35710796_35710887_35710988_35711083_35711254_35711395_35711594_35711793_35712004_35712125_35712834_35713044_35713195_35713299_35713952_35714082_35714238_35714374_35714573_35714688_35714759_35714877_35715058_35715188_35716389_35716557_35717145_35717441_35717618_35717787_35718811_35718911_35719073_35719283_35719518_35719628_35719739_35719854_35720038_35720220_35720432_35720510_35720811_35720914_35721647_35721804_35722118_35722224_35722860_35722922_35723951_35724080_35724191_35724335_35724571_35724725_35724829_35724960_35725223_35725322_35725564_35725728_35732074
transcript_140984.nnic	chr9	-	426	2	NNC	ENSG00000137076.21	novel	8623	57	NA	NA	43	-5948	at_least_one_novel_splicesite	FALSE	canonical	3	73	junction_1	0	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTTTTATTATCTCTAT	-35728558	True	NA	-10	True	AATAAA	-14	NA	35732152	35729051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35729400_35732074
transcript_140985.known	chr9	-	3611	17	FSM	ENSG00000070610.14	ENST00000378103.7	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	244	junction_14	79.6193090587955	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTGTGGTGTGTTTGAG	-35744769	True	NA	-4	True	AATAAA	-16	NA	35749228	35736865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35737448_35737747_35737940_35738036_35738153_35738231_35738375_35738525_35738633_35738751_35738904_35739001_35739110_35739314_35739420_35739627_35739801_35739997_35740124_35740208_35740363_35740525_35740629_35740824_35741065_35741671_35741891_35744296_35744413_35744614_35744707_35748345
transcript_140992.known	chr9	+	1496	9	FSM	ENSG00000107175.12	ENST00000353704.3	1496	9	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	28.577744837548	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCCTAGGTCACCCTCA	35729792	True	NA	4	True	AATAAA	-14	NA	35732665	35736999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35732902_35732995_35733144_35733214_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_140996.known	chr9	+	1496	8	FSM	ENSG00000107175.12	ENST00000486056.1	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	23.8507262542914	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAATGGCTTTCTGGGTCT	35729724	True	NA	13	True	NA	NA	NA	35732597	35736860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35732902_35732995_35733283_35733395_35733486_35735108_35735216_35735305_35735375_35736047_35736133_35736226_35736312_35736391
transcript_141001.known	chr9	+	7028	9	FSM	ENSG00000107185.10	ENST00000378078.5	7028	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	6.30352084156148	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAAAATGTCT	35747625	True	NA	NA	False	AATGAA	-9	NA	35749286	35758585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35749409_35749736_35749872_35750242_35750380_35750657_35750742_35750839_35750990_35751265_35751413_35751626_35751755_35751955_35752146_35752650
transcript_141002.known	chr9	-	696	2	FSM	ENSG00000228843.2	ENST00000425499.2	696	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGCTTGCAAGAGCAGAAG	NA	False	NA	NA	False	NA	NA	NA	35757940	35756711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35757195_35757727
transcript_141003.nnic	chr9	+	383	2	NNC	ENSG00000107185.10	novel	7028	9	NA	NA	7909	-648	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGCACAATCTAATTCAAT	35757188	False	NA	8	True	AATAAA	-18	NA	35757199	35757937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_35757376_35757730
transcript_141004.known	chr9	-	515	3	FSM	ENSG00000215183.5	ENST00000414286.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCGACTCTCACTGTCC	-35756559	False	NA	-3	True	AATAAA	-17	NA	35756613	35752991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35753281_35753659_35753769_35756496
transcript_14101.known	chr1	+	1827	11	FSM	ENSG00000117625.14	ENST00000452621.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	8.44037913840368	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGGTGTTATGTTTTTGT	211257281	True	NA	13	True	AATAAA	-23	NA	211259387	211313298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211312719
transcript_141017.nnic	chr9	+	420	4	Fusion	ENSG00000107185.10_ENSG00000227388.3	novel	1534	2	NA	NA	7446	0	multi-exon	FALSE	canonical	3	5	junction_3	7.48331477354788	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATTGTCCTTAATTTC	35756531	True	NA	NA	False	AATAAA	-20	NA	35756736	35790432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_35756862_35786646_35786776_35790155_35790268_35790378
transcript_141022.nnic	chr9	+	531	3	Fusion	ENSG00000107185.10_ENSG00000227388.3	novel	1534	2	NA	NA	7446	0	multi-exon	FALSE	canonical	3	11	junction_1	6	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATTGTCCTTAATTTC	35756531	True	NA	NA	False	AATAAA	-20	NA	35756736	35790432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_35756862_35786646_35786776_35790155
transcript_141023.nnic	chr9	+	632	3	Fusion	ENSG00000107185.10_ENSG00000227388.3	novel	1534	2	NA	NA	7681	0	multi-exon	FALSE	canonical	3	9	junction_1	7	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGCATTGTCCTTAATTTC	35756944	False	NA	NA	False	AATAAA	-20	NA	35756971	35790432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_35757198_35786646_35786776_35790155
transcript_141028.known	chr9	-	569	5	FSM	ENSG00000137133.11	ENST00000472085.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	190.354110804049	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35812960	True	NA	0	True	AATAAA	-16	NA	35814992	35812959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813520_35813643_35813785_35814898
transcript_141030.known	chr9	-	649	5	FSM	ENSG00000137133.11	ENST00000259667.6	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	10.7092249953019	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35813010	True	NA	0	True	AATAAA	-16	NA	35815042	35812959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35814898
transcript_141031.known	chr9	-	853	5	FSM	ENSG00000137133.11	ENST00000474848.6	853	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	177.27291812344	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35815342	False	NA	0	True	AATAAA	-16	NA	35815354	35812959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815006
transcript_141032.nnic	chr9	-	862	5	NNC	ENSG00000137133.11	novel	853	5	NA	NA	-131	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	193.712899673718	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35815473	False	NA	0	True	AATAAA	-16	NA	35815485	35812959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_35813146_35813265_35813339_35813444_35813550_35813643_35813785_35815128
transcript_141038.known	chr9	-	734	4	FSM	ENSG00000137133.11	ENST00000461169.1	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_3	12.0369800568452	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCTCCCTTAATTATGC	-35812989	True	NA	-14	True	AATAAA	-2	NA	35815021	35812973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813339_35813444_35813550_35813643_35813785_35814898
transcript_141040.nic	chr9	+	645	2	ISM	ENSG00000137103.20	ENST00000439587.6	2150	11	17158	0	16609	0	3prime_fragment	FALSE	canonical	3	45	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTCCACACTCTGTCCA	35846369	False	NA	2	True	AATAAA	-18	NA	35846385	35847235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_35846612_35846816
transcript_141041.known	chr9	-	717	2	FSM	ENSG00000137133.11	ENST00000490578.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCTCTCCTGTCTTTAA	-35813758	False	2032	0	True	AATAAA	-16	NA	35813770	35812959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35813550_35813643
transcript_141042.known	chr9	+	865	4	FSM	ENSG00000235387.5	ENST00000650257.1	865	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTACCCAGTCTCAGATAT	NA	False	NA	NA	False	AATAAA	-17	NA	35915460	35937152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_35916013_35930056_35930135_35935706_35935806_35937016
transcript_141043.known	chr9	-	975	1	FSM	ENSG00000213866.3	ENST00000444752.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGCTTACCATCTCTA	NA	False	NA	NA	False	NA	NA	NA	35972318	35971343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_35971300_35972300
transcript_141049.known	chr9	+	1717	9	FSM	ENSG00000122707.12	ENST00000479053.1	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	52.1989882564787	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTCGCTACTGTACTATT	36033547	True	NA	18	True	ATTAAA	-27	NA	36036939	36086195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085174
transcript_14105.known	chr1	+	2525	11	FSM	ENSG00000117625.14	ENST00000367006.8	2525	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	23.631335129442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGAGTTGGTTTTTTTTGTT	211259248	False	NA	6	True	AATATA	-23	NA	211259278	211314591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211271231_211271310_211274209_211274263_211276256_211276419_211278116_211278242_211279237_211279317_211289177_211289397_211295675_211295754_211304082_211304141_211313423
transcript_141053.nic	chr9	+	994	9	NIC	ENSG00000122707.12	novel	1128	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	48.5938203375697	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATATCTTGTCAGAGTTC	36033529	True	NA	4	True	ATTAAA	-13	NA	36036921	36086181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_36037099_36052264_36052324_36058826_36058902_36060118_36060156_36063794_36063881_36065576_36065625_36080604_36080639_36083364_36083563_36085901
transcript_141057.known	chr9	+	1895	5	FSM	ENSG00000122694.16	ENST00000377960.9	1895	5	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_4	2.58602010819715	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCTCCTCCAATGTGATT	36136077	True	NA	4	True	AATAAA	-19	NA	36136732	36163906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36150871_36150950_36162361
transcript_141064.known	chr9	+	812	4	FSM	ENSG00000122694.16	ENST00000377959.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	21.7460085737335	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGCGTCGTAATCTA	36136086	True	NA	42	True	NA	NA	NA	36136741	36162910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36136792_36147785_36147895_36148546_36148651_36162361
transcript_141067.nnic	chr9	+	959	5	NNC	ENSG00000122705.17	novel	1181	6	NA	NA	-178	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	664.914797173292	1584	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	36190665	True	NA	37	True	AATAAA	-19	NA	36190677	36212059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_36190912_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_141068.known	chr9	+	1078	5	FSM	ENSG00000122705.17	ENST00000345519.10	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	1458	junction_1	75.8102070964062	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGAAGCTTCTTTATT	36152098	True	NA	37	True	AATAAA	-19	NA	36190920	36212059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36191274_36197550_36197589_36198978_36199097_36204067_36204180_36211602
transcript_141075.known	chr9	+	989	3	FSM	ENSG00000122705.17	ENST00000540080.5	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	778.5	1230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGAAGCTTCTTTATTGA	36152033	True	NA	39	True	AATAAA	-21	NA	36190855	36212061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36191274_36204067_36204180_36211602
transcript_141079.nic	chr9	-	1163	3	ISM	ENSG00000159921.20	ENST00000447283.6	2174	11	-174	28520	-55	19264	5prime_fragment	FALSE	canonical	2	9	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTTCATTTTATTTTA	-36257765	True	NA	NA	False	TATAAA	-16	NA	36258503	36245708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_36246483_36249191_36249398_36258320
transcript_14108.known	chr1	+	452	3	FSM	ENSG00000117625.14	ENST00000472734.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	32	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTTGGAGAGAAACAAT	211257499	False	NA	3	True	ATTAAA	-14	NA	211259605	211261202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211259727_211260107_211260165_211260928
transcript_141082.known	chr9	-	5104	11	FSM	ENSG00000137075.18	ENST00000350199.8	5104	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	37.7201537642677	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATCTGTTGTGTTTCA	-36400694	False	NA	-9	True	AATAAA	-17	NA	36400923	36336403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_36339815_36342324_36342425_36344831_36344954_36351114_36351200_36352741_36352849_36353169_36353332_36356302_36356474_36357774_36357943_36369718_36369933_36375933_36376128_36400553
transcript_141089.known	chr9	+	2452	18	FSM	ENSG00000165304.8	ENST00000298048.7	2452	18	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	74.8205234320343	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCTTCTCTTTTTTGTA	36568320	True	NA	10	True	AATAAA	-17	NA	36572894	36677682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141102.known	chr9	+	2363	17	FSM	ENSG00000165304.8	ENST00000541717.4	2363	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	99.9229195117417	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141104.known	chr9	+	2342	17	FSM	ENSG00000165304.8	ENST00000536860.5	2342	17	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	98.925792895483	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141106.known	chr9	+	2400	17	FSM	ENSG00000165304.8	ENST00000543751.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	87.6815972710352	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141115.known	chr9	+	2236	16	FSM	ENSG00000165304.8	ENST00000545008.5	2236	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	104.854481173778	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568322	True	NA	9	True	AATAAA	-16	NA	36572896	36677681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36583626_36583713_36589535_36589653_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_14112.known	chr1	+	3976	11	FSM	ENSG00000082512.15	ENST00000261464.10	3976	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_8	18.0124956627337	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTTGTGATTTTTGTTTT	211325466	True	NA	20	True	AGTAAA	-22	NA	211326832	211374946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211326890_211353238_211353458_211354409_211354468_211356366_211356469_211359911_211360077_211360701_211360780_211361087_211361163_211365375_211365469_211369451_211369593_211371301_211371471_211372127
transcript_141122.known	chr9	+	2283	16	FSM	ENSG00000165304.8	ENST00000536329.5	2283	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105.475979361285	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTTCTCTTTTTTGTAT	36568287	True	NA	11	True	AATAAA	-18	NA	36572861	36677683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36581643_36581740_36594627_36594772_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141123.known	chr9	+	1966	16	FSM	ENSG00000165304.8	ENST00000626154.2	1966	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	124.611502946825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTTCATTGGAACTACCA	36568355	True	NA	NA	False	CATAAA	-25	NA	36572929	36677417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36589535_36589653_36594627_36594772_36597221_36597291_36599393_36599487_36607578_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141128.known	chr9	+	2125	15	FSM	ENSG00000165304.8	ENST00000536987.5	2125	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	124.432835747824	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCAGGCTTCTCTTTTTTGT	36568320	True	NA	9	True	AATAAA	-16	NA	36572894	36677681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_36573008_36589535_36589653_36597221_36597291_36599393_36599487_36607574_36607674_36630298_36630368_36633101_36633201_36642996_36643084_36651745_36651878_36657240_36657364_36665349_36665582_36669309_36669407_36670997_36671167_36674833_36674938_36677159
transcript_141138.known	chr9	+	4429	3	FSM	ENSG00000281649.3	ENST00000658888.2	4447	3	18	0	3	0	multi-exon	FALSE	canonical	2	11	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCCAAATTCAGATCAG	37074708	True	NA	-45	True	NA	NA	NA	37079876	37090342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080537_37084198_37084293_37086667
transcript_14114.known	chr1	-	602	2	FSM	ENSG00000287033.2	ENST00000667187.2	632	2	0	30	0	-30	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGTGAATTAAACTCTT	NA	False	NA	NA	False	AATAAA	-23	NA	211382717	211376833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211377117_211382398
transcript_141140.known	chr9	+	1656	3	FSM	ENSG00000281649.3	ENST00000665375.1	1656	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	57	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGGCATATTGAAAACAG	37074737	True	NA	NA	False	AAGAAA	-8	NA	37079905	37087995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080039_37080341_37080537_37086667
transcript_141141.known	chr9	+	636	2	FSM	ENSG00000281649.3	ENST00000631093.1	636	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAGAAGCAATTCAAGAC	37074739	True	NA	NA	False	NA	NA	NA	37079907	37087176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080035_37086667
transcript_141143.known	chr9	+	4520	2	FSM	ENSG00000281649.3	ENST00000625445.1	4520	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTGTACCCTCTTTCT	NA	False	NA	6	True	AATATA	-19	NA	37079856	37090507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080537_37086667
transcript_141146.known	chr9	+	311	2	FSM	ENSG00000281649.3	ENST00000625218.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAATCAGTGTTTGATCC	37074766	True	NA	NA	False	NA	NA	NA	37079934	37086874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080039_37086667
transcript_141148.known	chr9	+	579	2	FSM	ENSG00000281649.3	ENST00000627197.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATCCGTGCCAGCAGTCT	37074768	True	NA	NA	False	NA	NA	NA	37079936	37087152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080031_37086667
transcript_14115.known	chr1	+	786	7	FSM	ENSG00000153363.14	ENST00000662549.1	786	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.5733027404253	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	211382343	True	NA	8	True	AATAAA	-15	NA	211382776	211432535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211394951_211395002_211396766_211396832_211426210_211426284_211432318
transcript_141150.known	chr9	+	2365	3	FSM	ENSG00000281649.3	ENST00000664088.2	2404	3	39	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	57	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTTGCTTTACTGAC	37074729	True	NA	7	True	ATTAAA	-18	NA	37079897	37088704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37080031_37080341_37080537_37086667
transcript_141155.known	chr9	+	2584	9	FSM	ENSG00000147905.18	ENST00000336755.10	2584	9	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	35.8780486509509	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115043	True	NA	7	True	AATAAA	-16	NA	37120573	37358149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37120624_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_141160.nnic	chr9	+	2719	9	NIC	ENSG00000147905.18	novel	2793	9	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	33	junction_1	46.7103775942777	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATGTGTTTATTATGTAA	37115061	True	NA	7	True	AATAAA	-16	NA	37120591	37358149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_37120777_37126311_37126943_37302187_37302232_37304187_37304314_37305543_37305715_37327798_37327835_37349356_37349453_37354709_37354825_37356834
transcript_14117.known	chr1	+	778	7	FSM	ENSG00000153363.14	ENST00000653498.1	778	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	51.1490197581754	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTGAAGGCCCAC	211382396	True	NA	10	True	AATAAA	-17	NA	211382829	211432537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211384441_211384535_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432318
transcript_141180.nnic	chr9	+	1086	3	NNC	ENSG00000147905.18	novel	2584	9	NA	NA	-97	-26682	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	33	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGTGGTGGGGTGTGCCTG	NA	False	NA	NA	False	AATAAA	-17	NA	37120476	37160372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_37120624_37126311_37126943_37160064
transcript_141182.nic	chr9	+	1069	3	NIC	ENSG00000147905.18	novel	1219	4	NA	NA	-97	-52	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	33.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCACTGCTTTTTTCT	NA	False	NA	6	True	AGTAAA	-19	NA	37120476	37187002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_37120624_37126311_37126943_37186711
transcript_141184.nnic	chr9	+	1107	3	NIC	ENSG00000147905.18	novel	1219	4	NA	NA	-6	-52	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	16.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTCACTGCTTTTTTCT	37115061	True	NA	6	True	AGTAAA	-19	NA	37120591	37187002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_37120777_37126311_37126943_37186711
transcript_141189.known	chr9	+	1080	9	FSM	ENSG00000137106.18	ENST00000460882.5	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	139.061081453439	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTGGATCCACAGGCAG	37414954	True	NA	NA	False	NA	NA	NA	37422695	37436848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_14119.known	chr1	+	715	6	FSM	ENSG00000153363.14	ENST00000663427.1	715	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.2769292160344	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATAAACCTTTAGCTATT	211382374	True	NA	NA	False	AATAAA	-22	NA	211382807	211408439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211399376_211399438_211408200
transcript_14120.known	chr1	+	704	6	FSM	ENSG00000153363.14	ENST00000656082.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.6704944818607	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTTTGTTTTTGAAGGC	211382383	True	NA	6	True	AATAAA	-13	NA	211382816	211432533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396842_211426210_211426284_211432318
transcript_141203.known	chr9	+	602	6	FSM	ENSG00000137106.18	ENST00000491488.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	217.543191113857	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACCCGCAACACCATGTC	37414983	True	NA	NA	False	NA	NA	NA	37422724	37436692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422834_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_141204.known	chr9	+	1136	5	FSM	ENSG00000137106.18	ENST00000493368.5	1136	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	168.701474504522	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACGAACAGCCCTGCCTC	37414924	True	NA	NA	False	NA	NA	NA	37422665	37429158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422806_37424844_37424976_37425921_37425995_37426537_37426655_37428483
transcript_141210.known	chr9	+	1250	9	FSM	ENSG00000137106.18	ENST00000318158.11	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	58.6662967554626	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTCTTGGCCTGTAAAT	37414954	True	NA	14	True	ATTAAA	-14	NA	37422695	37436990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37436660
transcript_141211.known	chr9	+	1704	9	FSM	ENSG00000137106.18	ENST00000607784.1	1704	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	177.020081841016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTCAGCAACCAAAAACCAT	37415004	True	NA	-10	True	NA	NA	NA	37422745	37434879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37422834_37424844_37424976_37425921_37425995_37426537_37426655_37428483_37428573_37429731_37429837_37430510_37430647_37432007_37432139_37434045
transcript_141212.known	chr9	-	4690	2	FSM	ENSG00000168795.5	ENST00000307750.5	4690	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTTCTTTTTCTTTAC	-37465147	True	NA	0	True	AATAAA	-27	NA	37465450	37438101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37442556_37465214
transcript_141217.known	chr9	+	1855	12	FSM	ENSG00000137054.16	ENST00000377798.9	1855	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	9.82827763762879	582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTCCTTTGGTATTAT	37482438	True	NA	14	True	TATAAA	-23	NA	37485947	37503697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37486124_37486702_37486807_37487862_37487940_37489314_37489401_37492656_37492716_37493558_37493704_37495168_37495277_37495889_37495987_37498090_37498225_37500839_37500922_37501712_37501845_37503042
transcript_14122.known	chr1	+	1811	6	FSM	ENSG00000153363.14	ENST00000661331.1	1811	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.417554311509	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATCACAGTGTTTTATAA	211382328	True	NA	NA	False	AATAAA	-18	NA	211382761	211433679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391910_211391977_211396766_211396832_211426210_211426284_211432318
transcript_141226.nnic	chr9	-	1403	4	NNC	ENSG00000122696.14	novel	1871	4	NA	NA	-6	31535	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.73053390247253	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGATTGTTCATTGCT	-37902526	True	NA	NA	False	ATTAAA	-17	NA	37904133	37847864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_37848966_37881517_37881632_37899828_37899951_37904067
transcript_141228.known	chr9	-	4702	11	FSM	ENSG00000147912.13	ENST00000432825.7	4702	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	7.60591874792257	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGGAAGCCTTTCCTTA	-37575257	True	NA	1	True	AATAAA	-23	NA	37576380	37510891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37512722_37515903_37516086_37518124_37518439_37521568_37521839_37522824_37522978_37525101_37525173_37529123_37529261_37531908_37532059_37537109_37537944_37541183_37541775_37576210
transcript_141229.known	chr9	-	351	3	FSM	ENSG00000147912.13	ENST00000544208.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	18.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTCTACTCAGCCCTTT	NA	False	NA	NA	False	AATAAA	-15	NA	37525157	37522346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37522489_37522824_37522978_37525101
transcript_141230.known	chr9	-	635	2	FSM	ENSG00000175768.13	ENST00000544379.1	635	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTGTAAATAATGTCAAA	-37583574	True	NA	58	True	NA	NA	NA	37592596	37588641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592252
transcript_141231.known	chr9	-	789	2	FSM	ENSG00000175768.13	ENST00000401811.3	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCATTATTAGTCTATGTTT	-37583582	True	NA	54	True	NA	NA	NA	37592604	37588457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592290
transcript_141234.known	chr9	-	706	2	FSM	ENSG00000175768.13	ENST00000321301.7	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	4980	junction_1	0	13768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592411
transcript_141235.known	chr9	-	808	2	FSM	ENSG00000175768.13	ENST00000377773.9	808	2	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	0	899	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGTTTCTATTTTTCTT	-37583575	True	NA	99	True	AATAAA	-18	NA	37592597	37588412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37588933_37592309
transcript_141238.known	chr9	+	2293	9	FSM	ENSG00000165275.10	ENST00000297994.4	2293	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	8.89873586527884	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGATTAAGTCTGTCTT	37751973	True	NA	8	True	ATTAAA	-17	NA	37753804	37778972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763754_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_14124.known	chr1	+	557	6	FSM	ENSG00000153363.14	ENST00000656886.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.417554311509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTTTGTTTTTGAAGG	211382396	True	NA	5	True	AATAAA	-12	NA	211382829	211432532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391949_211391977_211396766_211396832_211426210_211426284_211432318
transcript_141244.known	chr9	+	1443	9	FSM	ENSG00000165275.10	ENST00000488673.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	15.7950743904548	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAATGCAGCTGCAGGAG	37751985	True	NA	-5	True	AATAAA	-5	NA	37753816	37778022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37753853_37761902_37762118_37762576_37762686_37763628_37763866_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777600
transcript_14126.known	chr1	+	1671	5	FSM	ENSG00000153363.14	ENST00000664255.1	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	13.0072095393286	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGTACTCTGTCCCTT	NA	False	NA	NA	False	TTTAAA	-6	NA	211382735	211399219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211398035
transcript_141274.known	chr9	-	535	4	FSM	ENSG00000107371.14	ENST00000489414.5	535	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.393663975089	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAAAGTTGATATAGGTG	-37800663	True	NA	NA	False	AAGAAA	-20	NA	37800709	37780690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37800666
transcript_141281.known	chr9	-	773	3	FSM	ENSG00000107371.14	ENST00000490516.5	773	3	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_2	84.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTATGTATTATTA	-37770353	False	NA	NA	False	TTTAAA	-17	NA	37784713	37780587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37780881_37783913_37784064_37784383
transcript_141289.known	chr9	+	2027	7	FSM	ENSG00000165275.10	ENST00000377753.6	2027	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.9722073677914	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACACAGTATTGATTAAGT	37751971	True	NA	1	True	ATTAAA	-10	NA	37753802	37778965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_37753853_37761902_37762118_37768075_37768229_37769940_37770020_37770671_37770740_37776281_37776406_37777627
transcript_14129.known	chr1	+	1115	4	FSM	ENSG00000153363.14	ENST00000662409.1	1115	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2.35702260395516	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTGCTCCTTCTCA	211382356	True	NA	NA	False	ATTAAA	-15	NA	211382789	211397513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766
transcript_141290.known	chr9	-	1813	4	FSM	ENSG00000107371.14	ENST00000327304.10	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	88.2660120821649	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGCTTCGTGTGTTTCTAA	-37770704	True	NA	NA	False	GATAAA	-7	NA	37785064	37779713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37780881_37781985_37782138_37783913_37784064_37784720
transcript_141291.known	chr9	-	768	3	FSM	ENSG00000107371.14	ENST00000396521.3	768	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	279	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACTCAGAAGATAAGGT	-37770704	True	NA	NA	False	NA	NA	NA	37785064	37780606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37780881_37783913_37784064_37784720
transcript_141292.known	chr9	-	1871	4	FSM	ENSG00000122696.14	ENST00000496760.5	1871	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.54606056566195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTGAGTAGCAAACTGAG	-37904090	True	NA	-1	True	AATAAA	-18	NA	37904353	37879399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37880749_37881517_37881632_37899828_37899951_37904067
transcript_141297.known	chr9	-	1171	3	FSM	ENSG00000122696.14	ENST00000242275.7	1171	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	2.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTTTGGCCTCTTTTTT	-37902520	True	NA	-3	True	AATAGA	-15	NA	37904127	37887603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_37888593_37899828_37899951_37904067
transcript_141301.known	chr9	+	3028	2	FSM	ENSG00000137124.8	ENST00000377698.4	3028	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	169	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTGTCTCCATATTG	38385649	True	NA	22	True	AATAAA	-22	NA	38392701	38398661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_38392808_38395739
transcript_141305.known	chr9	-	3566	5	FSM	ENSG00000137142.5	ENST00000377694.2	3566	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.79613860953409	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTGTGGTGTCTTTGTT	-38422694	True	NA	-5	True	AATAAA	-15	NA	38424454	38406527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_38409218_38411390_38411550_38413236_38413354_38414093_38414204_38423964
transcript_141311.nnic	chr9	-	1013	5	NNC	ENSG00000283486.2	novel	930	6	NA	NA	6968	2	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_4	5.76085931090146	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCAGTCTCTCTCTGTG	NA	False	NA	-5	True	AATAAA	-18	NA	38564184	38540566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_38540850_38541455_38541563_38542311_38542590_38563464_38563605_38563979
transcript_141318.nnic	chr9	-	1882	3	NNC	ENSG00000278175.5	novel	1884	3	NA	NA	0	-9	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	4	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCGGG	-39810001	False	NA	NA	False	NA	NA	NA	39810118	39807369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_39808762_39809485_39809588_39809730
transcript_141319.known	chr9	-	1845	3	FSM	ENSG00000278175.5	ENST00000627065.3	1884	3	39	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	44.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAAGTAGAGGCTTCAGT	-39809647	True	NA	NA	False	AAGAAA	-30	NA	39810089	39807405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39808762_39809485_39809616_39809730
transcript_141323.nnic	chr9	-	854	3	NNC	ENSG00000278175.5	novel	902	3	NA	NA	0	-13	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_2	38.5	224	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39810001	False	NA	NA	False	AATAAA	-15	NA	39810118	39803495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_39803860_39809485_39809588_39809730
transcript_141324.known	chr9	-	826	3	FSM	ENSG00000278175.5	ENST00000667968.2	902	3	61	15	0	-13	multi-exon	FALSE	canonical	3	105	junction_1	2	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809945	False	442	NA	False	AATAAA	-15	NA	39810062	39803495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39803860_39809485_39809616_39809730
transcript_141329.known	chr9	-	1397	2	FSM	ENSG00000278175.5	ENST00000670314.1	1397	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	-39809955	False	NA	NA	False	AATAAA	-21	NA	39810072	39808560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39809616_39809730
transcript_141332.known	chr9	-	694	2	FSM	ENSG00000278175.5	ENST00000666906.2	1012	2	305	13	96	-13	multi-exon	FALSE	canonical	3	105	junction_1	0	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	-39809698	False	NA	NA	False	AATAAA	-15	NA	39809815	39803495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39803860_39809485
transcript_141334.known	chr9	-	1739	5	FSM	ENSG00000204837.5	ENST00000640486.1	1739	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.49583217528247	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTATTGTTTTGTTATT	NA	False	NA	NA	False	ATTAAA	-21	NA	39874206	39816599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39817730_39818820_39818925_39830012_39830111_39863832_39863943_39873909
transcript_141336.nnic	chr9	-	1104	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-35	-107556	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	330	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTCCTCTGTGCAA	NA	False	NA	NA	False	AATAAA	-14	NA	40106646	40091348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_40092164_40106357
transcript_141337.nnic	chr9	-	805	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-35	-107855	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	134	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTGATACCATTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	40106646	40091647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_40092164_40106357
transcript_141339.nnic	chr9	-	2065	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	-367	-1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	6.34209919681348	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATCTGTTTCATATGCTT	NA	False	NA	NA	False	TATAAA	-17	NA	39874573	39816542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_141340.nnic	chr9	-	2009	4	NIC	ENSG00000204837.5	novel	1739	5	NA	NA	-367	1	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	6.34209919681348	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874573	39816598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_39817730_39818820_39818925_39863832_39863943_39873909
transcript_141342.known	chr9	-	1888	3	FSM	ENSG00000283886.3	ENST00000622735.2	1888	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	5	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTATTGTTTTGTTATTT	NA	False	NA	NA	False	ATTAAA	-22	NA	39874562	39816598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_39817730_39818820_39818925_39873909
transcript_141345.nnic	chr9	-	787	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-17	-107855	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTGATACCATTTCCA	NA	False	NA	NA	False	AATAAA	-19	NA	40106628	40091647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_40092164_40106357
transcript_141347.nnic	chr9	-	664	2	NNC	ENSG00000284116.1	novel	1066	4	NA	NA	-17	-107978	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTCTCAGTAAAAATTTG	NA	False	NA	NA	False	CATAAA	-15	NA	40106628	40091770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_40092164_40106357
transcript_14135.known	chr1	+	469	3	FSM	ENSG00000153363.14	ENST00000610948.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	18	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTTTGTTTTTGAAGGCC	211398078	False	NA	7	True	AATAAA	-14	NA	211399257	211432534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211399438_211426210_211426284_211432318
transcript_141351.nnic	chr9	+	1316	7	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	-66	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	11.8743420870379	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	NA	False	NA	NA	False	AATAAA	-32	NA	40992178	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_141357.nnic	chr9	+	1531	7	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_4	11.0817668065862	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990867	True	NA	NA	False	AATAAA	-32	NA	40992259	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_141361.nnic	chr9	+	1190	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	-66	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	16.2160414404996	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	NA	False	NA	NA	False	AATAAA	-32	NA	40992178	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_141363.nnic	chr9	+	1065	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	16.9870538940689	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990867	True	NA	NA	False	AATAAA	-32	NA	40992259	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40993252_40993435_40994632_40994700_41008880_41009007_41011616_41011731_41013780
transcript_141364.nnic	chr9	+	1063	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	1	-1068	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.1248529406111	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990857	True	NA	NA	False	AATAAA	-32	NA	40992249	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_141365.nnic	chr9	+	1352	6	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	-3	-1068	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	16.2111073033276	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990864	True	NA	NA	False	AATAAA	-32	NA	40992256	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40994632_40994700_41007439_41007610_41008880_41009007_41011616_41011731_41013780
transcript_141369.nnic	chr9	+	1405	6	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_4	15.6	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990867	True	NA	NA	False	AATAAA	-32	NA	40992259	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_141374.nnic	chr9	+	937	5	NNC	ENSG00000276291.6	novel	1068	7	NA	NA	1	-1068	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	22.92787604642	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990857	True	NA	NA	False	AATAAA	-32	NA	40992249	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992480_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_141379.nnic	chr9	+	1226	5	NNC	ENSG00000276291.6	novel	2139	9	NA	NA	-3	-1068	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	20.2854627751008	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990864	True	NA	NA	False	AATAAA	-32	NA	40992256	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40994632_40994700_41007439_41007610_41011616_41011731_41013780
transcript_14138.known	chr1	+	681	6	FSM	ENSG00000153363.14	ENST00000657539.1	681	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.4790180567115	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTTTGAAGGCCC	211382396	True	NA	8	True	AATAAA	-15	NA	211382829	211432535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432320
transcript_141381.nnic	chr9	+	1235	5	NNC	ENSG00000276291.6	novel	1307	6	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	16.4677715553745	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAACTGCTTACTGTTT	40990867	True	NA	NA	False	AATAAA	-32	NA	40992259	41014136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_40992776_40993252_40993435_40994632_40994700_41011616_41011731_41013780
transcript_141382.known	chr9	+	576	4	ISM	ENSG00000276291.6	ENST00000610803.5	1068	7	1	25475	0	-4360	5prime_fragment	FALSE	canonical	3	28	junction_1	13.4246870437348	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCAAACCAAAGGCAAAGAA	40990868	True	NA	NA	False	NA	NA	NA	40992260	41007547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992480_40993252_40993435_40994632_40994700_41007439
transcript_141388.known	chr9	+	830	4	ISM	ENSG00000276291.6	ENST00000692434.1	1473	7	0	48288	0	-2961	5prime_fragment	FALSE	canonical	1	3	junction_3	20.5480466765633	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCTATATACATGCACTC	40990868	True	NA	NA	False	NA	NA	NA	40992260	41008946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992776_40993252_40993435_40994632_40994700_41008880
transcript_141389.nic	chr9	+	397	2	ISM	ENSG00000276291.6	ENST00000684885.1	816	4	4	1767	-3	267	5prime_fragment	FALSE	canonical	3	28	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	40990872	True	NA	NA	False	AATAAA	-7	NA	40992264	40993434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_40992480_40993252
transcript_14139.known	chr1	+	784	6	FSM	ENSG00000153363.14	ENST00000669618.1	784	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.4790180567115	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAATGTGTTCTACTTATT	211382323	True	NA	NA	False	AATAAA	-18	NA	211382756	211432290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_211382926_211391615_211391698_211391826_211391977_211396766_211396832_211426210_211426284_211432045
transcript_14140.known	chr1	-	2134	8	FSM	ENSG00000117650.13	ENST00000366999.9	2134	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.8321595661992	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTGTCTTGCATTTGT	-211673074	True	NA	0	True	AATAAA	-23	NA	211675621	211662771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211663653_211667105_211667232_211669112_211669333_211670280_211670408_211671201_211671285_211673482_211673724_211674295_211674514_211675383
transcript_14141.nnic	chr1	+	312	3	NNC	ENSG00000231057.4	novel	755	4	NA	NA	-19	-9308	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCAGTCTGTGGCATCCT	211675712	True	NA	NA	False	AATAAA	-16	NA	211675729	211677406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_211675867_211677066_211677155_211677319
transcript_14142.known	chr1	-	4430	20	FSM	ENSG00000143493.13	ENST00000366994.8	4430	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.8036349692082	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTTGCCTTTTTCTCT	-212032943	True	NA	-5	True	AATAAA	-17	NA	212035557	211940402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212020121_212020269_212021082_212021213_212035343
transcript_14144.known	chr1	-	3136	19	FSM	ENSG00000143493.13	ENST00000440600.6	3136	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	48.6129840909013	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAATTAGCCAAGCATG	-212032925	True	NA	NA	False	ACTAAA	-7	NA	212035539	211941531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_211942112_211944783_211944970_211946606_211946706_211952568_211952702_211966429_211966499_211967877_211967982_211968512_211968708_211975165_211975373_211976581_211976720_211978271_211978512_211981092_211981191_211982675_211982811_211987885_211988004_212006638_212006762_212007249_212007450_212011374_212011422_212016885_212017024_212021082_212021213_212035343
transcript_141445.known	chr9	-	1820	16	FSM	ENSG00000215126.11	ENST00000613716.4	1820	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	285.831061215459	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	41189364	41131305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_41131841_41132227_41132358_41133504_41133571_41133673_41133743_41145280_41145333_41156382_41156440_41162332_41162378_41165000_41165088_41166783_41166831_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41188009_41188108_41189104
transcript_141446.known	chr9	-	721	7	FSM	ENSG00000215126.11	ENST00000617933.1	721	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	588.511894527205	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGCAGAAGAGAATGAAATC	NA	False	NA	NA	False	AGTAAA	-38	NA	41189436	41171919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_41171935_41172711_41172750_41174292_41174353_41182374_41182467_41183563_41183661_41185992_41186080_41189104
transcript_141448.nic	chr9	-	643	3	ISM	ENSG00000215126.11	ENST00000617933.1	721	7	23	11494	23	-11494	5prime_fragment	FALSE	canonical	3	1131	junction_1	231.5	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAAAGTGTTTCTTG	NA	False	NA	NA	False	AATAAA	-15	NA	41189413	41183413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_41183661_41185992_41186080_41189104
transcript_141451.known	chr9	-	1059	3	FSM	ENSG00000276412.2	ENST00000611630.2	1059	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACAGTAGTTATAGGAGC	NA	False	NA	NA	False	AATATA	-24	NA	41654594	41651657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_41652143_41652916_41653179_41654282
transcript_141452.known	chr9	-	1479	3	FSM	ENSG00000237357.2	ENST00000428895.1	1479	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	9	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	42569310	42566992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_42568060_42568784_42568915_42569028
transcript_141454.nnic	chr9	-	727	2	NNC	ENSG00000237357.2	novel	2579	2	NA	NA	-33	3873	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTATCATCTGTTCCAG	NA	False	NA	NA	False	AATAAA	-20	NA	42569386	42562805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_42563175_42569028
transcript_141455.known	chr9	-	2579	2	FSM	ENSG00000237357.2	ENST00000435586.1	2579	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	42569353	42566678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_42568933_42569028
transcript_141456.known	chr9	+	291	2	FSM	ENSG00000204816.5	ENST00000441829.3	291	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGCATATGGTATATAAA	NA	False	NA	NA	False	AAGAAA	-41	NA	42625435	42626813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_42625534_42626620
transcript_141459.known	chr9	+	559	3	FSM	ENSG00000231527.7	ENST00000657353.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGTTTTTGTAAGTTT	61856551	False	NA	NA	False	AAGAAA	-18	NA	61856570	61975965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_61856815_61917467_61917608_61975790
transcript_141460.known	chr9	+	616	2	FSM	ENSG00000231527.7	ENST00000377542.3	616	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGAGATCCGTGTCA	61854142	False	NA	NA	False	AAAAAG	-28	NA	61854161	61855331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_61854377_61854930
transcript_141461.known	chr9	-	439	2	FSM	ENSG00000235659.1	ENST00000377547.3	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTGGCTCTACTGACAG	NA	False	NA	NA	False	NA	NA	NA	61866965	61865754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_61866078_61866849
transcript_141462.nnic	chr9	+	2073	4	NNC	ENSG00000227449.8	novel	1890	3	NA	NA	-16	57	intron_retention	FALSE	canonical	1	1	junction_2	6.12825877028341	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTCATATGCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	62376144	62435256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_62376814_62386773_62386884_62432875_62432980_62434066
transcript_141464.nnic	chr9	+	1620	4	NNC	ENSG00000227449.8	novel	1890	3	NA	NA	2	57	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.29983164553722	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTTTCATATGCTTTT	NA	False	NA	NA	False	ATTAAA	-18	NA	62376518	62435256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_62376814_62386852_62386884_62432875_62432980_62434066
transcript_141465.known	chr9	+	1890	3	FSM	ENSG00000227449.8	ENST00000377614.7	1890	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATTTTGTTATTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	62376160	62435199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62376814_62432875_62432980_62434066
transcript_141468.known	chr9	-	1480	3	FSM	ENSG00000204802.3	ENST00000429818.1	1480	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	62376780	62374461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62375529_62376252_62376383_62376497
transcript_141469.known	chr9	-	2541	2	FSM	ENSG00000204802.3	ENST00000377518.3	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCGGGCAAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62376783	62374127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62376383_62376497
transcript_141471.known	chr9	-	256	2	FSM	ENSG00000204802.3	ENST00000412631.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	-62376040	False	NA	NA	False	AATAAA	-21	NA	62376126	62375327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62375529_62376071
transcript_141472.known	chr9	-	781	2	FSM	ENSG00000204802.3	ENST00000430302.1	781	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTAGCCTTGGATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	62376836	62375331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62375529_62376252
transcript_141475.known	chr9	+	1549	3	FSM	ENSG00000226007.3	ENST00000450704.1	1549	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	13	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGGTGGAGTGCTCTGT	NA	False	NA	NA	False	NA	NA	NA	62532336	62534724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62532689_62532802_62532933_62533657
transcript_141476.known	chr9	+	841	3	FSM	ENSG00000226007.3	ENST00000420615.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62532377	62533858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62532689_62532784_62533114_62533657
transcript_141478.nnic	chr9	+	744	2	NNC	ENSG00000226007.3	novel	2245	2	NA	NA	-16	4193	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTGTTCCAGTTCTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	62532320	62538917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_62532689_62538541
transcript_141480.known	chr9	+	667	3	FSM	ENSG00000170161.7	ENST00000671425.1	667	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.5	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	NA	False	NA	NA	False	AATAAA	-21	NA	62897370	62898904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897735_62897877_62897980_62898703
transcript_141483.known	chr9	+	1567	3	FSM	ENSG00000170161.7	ENST00000476224.2	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	9.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTGCTCTGTTTACTTA	NA	False	NA	NA	False	NA	NA	NA	62897371	62899777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897735_62897849_62897980_62898703
transcript_141486.nic	chr9	-	1248	3	ISM	ENSG00000234665.9	ENST00000445604.7	1610	5	-211	2392	-211	-115	5prime_fragment	FALSE	canonical	3	35	junction_1	1.5	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGACAATTTCTTAAAA	NA	False	NA	-22	True	AATAAA	-19	NA	62898306	62867988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_62868234_62869189_62869305_62897418
transcript_141487.known	chr9	-	1713	3	FSM	ENSG00000234665.9	ENST00000654882.1	1713	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	13.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTAACTGCTTTGTT	NA	False	NA	NA	False	GATAAA	-20	NA	62898095	62867202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_62868234_62869189_62869305_62897528
transcript_141489.nic	chr9	-	1100	3	ISM	ENSG00000234665.9	ENST00000445604.7	1610	5	-211	2540	-211	0	5prime_fragment	FALSE	canonical	3	35	junction_1	1.5	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCAGTATTTTATGTG	NA	False	NA	-7	True	AATAAA	-19	NA	62898306	62868136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_62868234_62869189_62869305_62897418
transcript_141491.nnic	chr9	+	994	2	NNC	ENSG00000170161.7	novel	1604	2	NA	NA	-18	3865	intron_retention	FALSE	canonical	3	71	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATGTCTTATCATCTGT	NA	False	NA	NA	False	AATAAA	-15	NA	62897349	62903969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_62897980_62903605
transcript_141492.known	chr9	+	2541	2	FSM	ENSG00000170161.7	ENST00000305709.5	2541	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCGGGCCAGGCACGAT	NA	False	NA	NA	False	NA	NA	NA	62897448	62900104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897735_62897849
transcript_141493.known	chr9	+	256	2	FSM	ENSG00000170161.7	ENST00000467494.2	256	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCCTTGGATTTTCAAAT	62898093	False	NA	NA	False	AATAAA	-21	NA	62898105	62898904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62898161_62898703
transcript_141494.known	chr9	+	1604	2	FSM	ENSG00000170161.7	ENST00000661415.1	1604	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACCTGGTGGAGTGC	NA	False	NA	NA	False	NA	NA	NA	62897437	62899765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_62897980_62898703
transcript_141499.nnic	chr9	+	1210	2	Antisense	novelGene_ENSG00000232815.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	63817442	True	NA	NA	False	NA	NA	NA	63817487	63819207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_+_63818277_63818786
transcript_1415.nic	chr1	+	1214	2	ISM	ENSG00000204859.13	ENST00000435905.5	1001	3	-21	566	2	-566	5prime_fragment	FALSE	canonical	3	43	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGGACCTTAAGACAAT	6578517	True	NA	NA	False	NA	NA	NA	6579995	6581679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_6580071_6580540
transcript_14150.known	chr1	+	4409	15	FSM	ENSG00000143476.18	ENST00000366991.5	4409	15	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_10	15.0829339970439	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAGCATTTAAGATGGC	212029167	True	NA	8	True	AATAAA	-22	NA	212035747	212105013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212035943_212042992_212043119_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_141502.nnic	chr9	-	1127	6	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16374	430	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	732.003715837563	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	NA	False	NA	NA	False	AATAAA	-16	NA	65306641	65287483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65306363
transcript_141505.nnic	chr9	-	692	6	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16438	59	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_5	732.003715837563	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	-65306406	True	NA	NA	False	AATAAA	-16	NA	65306577	65287854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65306363
transcript_141506.nnic	chr9	-	596	6	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16449	59	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	734.727595779552	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	-65306395	True	NA	NA	False	AATAAA	-16	NA	65306566	65287854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65289826_65289896_65301424_65301477_65306448
transcript_141510.nnic	chr9	-	875	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16472	430	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	579.383023137544	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	-65306372	True	NA	NA	False	AATAAA	-16	NA	65306543	65287483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65301424_65301477_65306448
transcript_141513.nnic	chr9	-	843	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16396	383	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	777.08441465519	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGTCACCATTTTATG	NA	False	NA	NA	False	ATTAAA	-15	NA	65306619	65287530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65306448
transcript_141514.nnic	chr9	-	687	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16374	59	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	577.725929831784	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65306641	65287854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65301424_65301477_65306363
transcript_141515.nnic	chr9	-	580	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16396	59	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	579.383023137544	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65306619	65287854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65288402_65288533_65289657_65289724_65301424_65301477_65306448
transcript_141518.nnic	chr9	-	626	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16374	59	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_4	774.235267861133	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65306641	65287854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65306363
transcript_141519.nnic	chr9	-	519	5	NNC	ENSG00000204778.4	novel	655	9	NA	NA	16396	59	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	777.08441465519	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	65306619	65287854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_65288016_65289657_65289724_65289826_65289896_65301424_65301477_65306448
transcript_141522.known	chr9	+	1483	16	FSM	ENSG00000147996.17	ENST00000377389.5	1483	16	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	575.693166732264	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTCAAGCATTTATTTA	65669484	True	NA	3	True	AATAAA	-19	NA	65675836	65733673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141525.nnic	chr9	+	758	6	NNC	ENSG00000147996.17	novel	722	4	NA	NA	-4498	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	688.309407170932	365	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	NA	False	NA	2	True	AATAAA	-18	NA	65714886	65733672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_65715165_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141539.known	chr9	+	894	4	FSM	ENSG00000147996.17	ENST00000377380.5	894	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	526.087445202791	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAACCTTACATTATGT	65669522	True	NA	NA	False	AATAAA	-14	NA	65675874	65682026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65677127_65677226_65679165_65679253_65681573
transcript_14154.known	chr1	+	4471	14	FSM	ENSG00000143476.18	ENST00000542077.5	4471	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	97.3838862531946	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAGACTTTGAGCATTTA	212035538	False	NA	1	True	AATAAA	-15	NA	212035552	212105006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212035943_212044659_212044759_212047150_212047213_212047296_212047418_212062883_212062950_212064916_212065030_212066811_212066886_212068223_212068328_212068598_212068704_212072100_212072214_212078172_212078263_212080614_212080751_212100251_212101085_212102841
transcript_141540.known	chr9	+	1347	3	FSM	ENSG00000147996.17	ENST00000377384.5	1347	3	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_2	174.5	2673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTATTGTTTTCTCCC	65669522	True	NA	NA	False	AATAAA	-42	NA	65675874	65682577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573
transcript_141541.known	chr9	+	1411	16	FSM	ENSG00000147996.17	ENST00000497250.5	1411	16	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	559.151007232294	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	65669543	True	NA	0	True	AATAAA	-16	NA	65675895	65733670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141542.known	chr9	+	2863	17	FSM	ENSG00000147996.17	ENST00000377392.9	2863	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	604.890020995553	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGATGTTGATGTTGACGA	65669481	True	NA	NA	False	AATAAA	-15	NA	65675833	65734040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65693385_65693474_65698514_65698562_65700250_65700338_65702969_65703015_65704330_65704589_65708139_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141543.known	chr9	+	1662	15	FSM	ENSG00000147996.17	ENST00000382405.8	1662	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	550.338597073267	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTTGATGTTGACGAC	65669575	True	NA	NA	False	AATAAA	-16	NA	65675927	65734041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141544.known	chr9	+	1242	14	FSM	ENSG00000147996.17	ENST00000430059.6	1242	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	591.079275612985	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCAAGCATTTATTTAT	65669571	True	NA	4	True	AATAAA	-20	NA	65675923	65733674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65700250_65700338_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141545.known	chr9	+	1143	13	FSM	ENSG00000147996.17	ENST00000377395.8	1143	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	629.798623018148	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAGCATTTATTTATTA	65669585	True	NA	6	True	AATAAA	-22	NA	65675937	65733676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65698514_65698562_65702969_65703015_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141546.known	chr9	+	1436	16	FSM	ENSG00000147996.17	ENST00000486221.5	1436	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	590.823177157656	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	65669577	True	NA	2	True	AATAAA	-18	NA	65675929	65733672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_65676131_65679165_65679253_65681573_65681671_65682765_65682858_65690966_65691027_65692570_65692609_65694904_65695050_65698514_65698562_65700250_65700338_65702969_65703015_65708901_65708959_65720040_65720093_65731629_65731699_65731801_65731868_65732992_65733123_65733509
transcript_141549.known	chr9	+	1771	16	FSM	ENSG00000196873.16	ENST00000615061.4	1771	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	337.809939989272	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGTTATGACTGTTATT	NA	False	NA	NA	False	ATTAAA	-44	NA	68241953	68299994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_141563.known	chr9	+	1403	4	FSM	ENSG00000196873.16	ENST00000377349.6	1403	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	528.831626218486	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTCTTTTTACCTAT	NA	False	NA	NA	False	AATAAA	-14	NA	68241944	68248589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68243182_68243281_68245212_68245300_68247612
transcript_141566.known	chr9	+	1736	3	FSM	ENSG00000196873.16	ENST00000478048.5	1736	3	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_2	233.5	2449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAAGTACTCGTTTGTCA	NA	False	NA	NA	False	ATTAAA	-45	NA	68241955	68249031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68245212_68245300_68247612
transcript_141567.known	chr9	+	1665	14	FSM	ENSG00000196873.16	ENST00000377342.9	1665	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	428.032861095401	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	68241925	68300015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_141568.known	chr9	+	1685	15	FSM	ENSG00000196873.16	ENST00000360171.11	1685	15	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_12	408.430301550325	1569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTGGCTGAAGGAGTG	NA	False	NA	NA	False	AATAAA	-39	NA	68241982	68300035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_68242186_68245212_68245300_68247612_68247710_68248805_68248898_68256920_68256981_68258531_68258570_68264467_68264515_68266219_68266307_68268933_68268979_68274881_68274939_68285988_68286041_68297579_68297649_68297751_68297818_68298963_68299094_68299480
transcript_141572.known	chr9	+	4806	25	FSM	ENSG00000285130.2	ENST00000642889.1	4806	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	119.621596665857	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTGCAATCCGTAATTT	69031593	True	NA	-3	True	AATAAA	-7	NA	69035749	69255187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69035948_69099900_69100062_69151650_69151772_69212547_69212602_69216338_69216464_69218256_69218360_69220886_69221497_69225303_69225408_69226021_69226176_69227764_69227874_69227980_69228115_69229183_69229251_69230081_69230233_69234438_69234548_69236027_69236239_69236948_69237137_69237877_69237974_69238709_69238790_69239936_69240148_69246689_69246791_69248011_69248225_69249374_69249486_69251034_69251365_69252814_69252901_69254208
transcript_141575.known	chr9	+	922	5	FSM	ENSG00000165060.15	ENST00000396366.6	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	189.432705729502	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCTTATGCCTATACCT	69031605	True	NA	NA	False	NA	NA	NA	69035761	69073022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69035948_69046384_69046483_69053139_69053261_69064937_69065044_69072611
transcript_141578.known	chr9	+	856	5	FSM	ENSG00000165060.15	ENST00000498653.5	856	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	215.20106877058	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTCACTCTTCATTCT	69036138	False	NA	NA	False	AAAAAG	-41	NA	69036160	69073105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69036206_69046384_69046483_69053139_69053261_69064937_69065036_69072611
transcript_141579.known	chr9	+	2632	4	FSM	ENSG00000165060.15	ENST00000644653.1	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	210.492016211753	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGCCAGTGCCAGTGAG	69031594	True	NA	-38	True	AATAAA	-36	NA	69035750	69074850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69035948_69046384_69046483_69064937_69065036_69072611
transcript_141586.known	chr9	-	750	4	FSM	ENSG00000278910.5	ENST00000624238.3	764	4	7	7	-2	-3	multi-exon	FALSE	canonical	0	0	junction_3	5.90668171555645	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	-69307061	True	NA	NA	False	AATAAA	-17	NA	69307135	69296684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69296868_69304935_69305078_69306147_69306291_69306853
transcript_141590.nic	chr9	-	1135	3	FSM	ENSG00000278910.5	ENST00000690153.1	617	3	-525	7	-521	-3	multi-exon	FALSE	canonical	3	8	junction_2	2.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGTTTTACTGTGCACAT	-69307653	False	NA	NA	False	AATAAA	-17	NA	69307663	69296684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69296868_69304935_69305078_69306853
transcript_141593.known	chr9	-	558	4	FSM	ENSG00000278910.5	ENST00000625062.4	558	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.35412613473634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTACTGTGCACATTTC	NA	False	NA	NA	False	AATAAA	-20	NA	69311111	69296681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69296868_69304935_69305078_69306853_69306989_69311016
transcript_141594.known	chr9	+	2216	11	FSM	ENSG00000135063.20	ENST00000455972.6	2216	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	26.4764045897475	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGATCACGGACAATAAATC	NA	False	NA	-25	True	NA	NA	NA	69324566	69392558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69324631_69336212_69336270_69371498_69371610_69375735_69375865_69377369_69377478_69377610_69377745_69383629_69383760_69383946_69384026_69385794_69385948_69388157_69388451_69391600
transcript_141595.known	chr9	-	10099	8	FSM	ENSG00000188647.13	ENST00000340434.5	10099	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	16.8559321599131	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTTAAGTGTGATTTT	-69752823	True	NA	-4	True	AGTAAA	-18	NA	69760011	69709524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69718569_69718649_69718685_69723325_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_141602.nic	chr9	-	1323	6	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	-1	13499	-1	-5003	5prime_fragment	FALSE	canonical	3	48	junction_4	6.29285308902091	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGACTCCTTCCTTGGA	-69752824	True	NA	NA	False	AATAAA	-16	NA	69760012	69723023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_69723631_69732138_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_141606.nic	chr9	-	923	5	ISM	ENSG00000188647.13	ENST00000340434.5	10099	8	-1	22407	-1	0	5prime_fragment	FALSE	canonical	3	48	junction_3	7.01338006955277	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAGTGCATTGGTAAAGC	-69752824	True	NA	22	True	AATAAA	-42	NA	69760012	69731931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_69732353_69734149_69734255_69741791_69741859_69750780_69750951_69759852
transcript_141608.nnic	chr9	-	735	2	NNC	ENSG00000188647.13	novel	1689	2	NA	NA	-3	-560	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTTTTTCTTGTCC	-69752826	True	NA	NA	False	NA	NA	NA	69760014	69757682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_69758256_69759852
transcript_141609.known	chr9	-	1689	2	FSM	ENSG00000188647.13	ENST00000472967.2	1689	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAAGTGTTGTGGGTACC	-69752771	True	NA	NA	False	ATTAAA	-17	NA	69759959	69757122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_69758705_69759852
transcript_141611.nnic	chr9	-	654	2	NNC	ENSG00000188647.13	novel	1689	2	NA	NA	-3	-641	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTAAGGCATTGTTT	-69752826	True	NA	NA	False	AATAAA	-19	NA	69760014	69757763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_69758256_69759852
transcript_141618.known	chr9	+	794	6	FSM	ENSG00000204711.9	ENST00000466872.2	794	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	72.7780186594826	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818873	True	NA	4	True	AATAAA	-17	NA	69820827	69906227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69885052_69885123_69886837_69886896_69905953
transcript_141620.known	chr9	+	844	6	FSM	ENSG00000204711.9	ENST00000377197.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	55.3642483919	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATAGTAGATTCCTTTAAG	69818862	True	NA	4	True	AATAAA	-17	NA	69820816	69906227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_141622.known	chr9	+	697	5	FSM	ENSG00000204711.9	ENST00000529446.5	697	5	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	13.6633634219397	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	69818872	True	NA	-24	True	AATGAA	-28	NA	69820826	69906199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69856554_69856674_69857908_69857978_69886837_69886896_69905953
transcript_141623.known	chr9	+	748	5	FSM	ENSG00000204711.9	ENST00000527647.5	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	56.5392562738492	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	69818872	True	NA	-24	True	AATGAA	-28	NA	69820826	69906199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908_69857978_69905953
transcript_141625.nic	chr9	+	711	4	NIC	ENSG00000204711.9	novel	748	5	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_3	63.2947250742289	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTTAATAAATGCAATGG	NA	False	NA	-24	True	AATGAA	-28	NA	69820754	69906199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_69821032_69856554_69856674_69857908_69857978_69905953
transcript_141627.known	chr9	+	550	4	FSM	ENSG00000204711.9	ENST00000480564.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	54.7905101272109	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAACAGTAAATCCTC	69819005	False	NA	-19	True	NA	NA	NA	69820959	69858158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69844516_69844626_69856554_69856674_69857908
transcript_141629.known	chr9	+	502	3	FSM	ENSG00000204711.9	ENST00000495399.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	17	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGCAGATCCTGTATT	69818965	True	NA	2	True	AATAAA	-15	NA	69820919	69858179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_69821032_69856554_69856674_69857908
transcript_141630.known	chr9	+	3351	14	FSM	ENSG00000165072.10	ENST00000377182.5	3351	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	8.13204633009385	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACTAGCAATTAACTCAT	NA	False	NA	10	True	AATAAA	-18	NA	70043847	70226972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_70044232_70044583_70044698_70108210_70108483_70109719_70109805_70112994_70113133_70126158_70126416_70131518_70131613_70140144_70140289_70143553_70143820_70168701_70168796_70170478_70170632_70218336_70218597_70225749_70225835_70225967
transcript_141637.known	chr9	+	474	1	FSM	ENSG00000236801.1	ENST00000446071.1	474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	699	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGGCAGATTAGATTTTTA	NA	False	NA	NA	False	NA	NA	NA	70217194	70217668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_70217200_70217700
transcript_141638.known	chr9	-	1153	2	FSM	ENSG00000268364.3	ENST00000670800.2	1308	2	141	14	129	-11	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATCACAGGCACTATTT	-70258570	False	NA	NA	False	ATTAAA	-8	NA	70258681	70229003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_70229390_70257914
transcript_141645.known	chr9	+	5949	25	FSM	ENSG00000198887.9	ENST00000361138.7	5949	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	39.5660488578557	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTGTATGTTATTTTA	70254508	True	NA	28	True	AATAAA	-18	NA	70258977	70354873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_70259264_70264303_70264446_70267922_70267976_70277309_70277473_70278490_70278626_70280758_70280900_70282421_70282584_70286199_70286272_70297965_70298222_70300045_70300201_70305246_70305361_70314741_70314837_70315445_70315579_70318513_70318688_70318793_70318964_70323482_70323607_70324020_70324144_70344143_70344270_70346604_70346650_70347065_70347162_70347612_70347718_70347918_70348039_70350113_70350294_70350375_70350472_70352190
transcript_14165.nnic	chr1	+	1401	3	NNC	ENSG00000143476.18	novel	4471	14	NA	NA	-4	-1158	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	193.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTGTGGGGTTTTTTT	212029163	True	NA	11	True	AATACA	-15	NA	212035743	212103436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212035801_212100335_212101085_212102841
transcript_141653.known	chr9	+	333	1	FSM	ENSG00000229814.1	ENST00000437667.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAACGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	71589600	71589933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71589600_71589900
transcript_141654.known	chr9	-	6152	24	FSM	ENSG00000135048.14	ENST00000377044.9	6152	24	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_22	20.2386517479468	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTGTGTATGTGAATT	-71765795	True	NA	-11	True	AATAAA	-22	NA	71768513	71683365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_71685394_71685742_71685847_71690091_71690247_71694508_71694608_71697984_71698205_71700641_71700825_71704594_71704804_71709258_71709475_71712082_71712261_71714933_71715090_71716516_71716553_71717947_71718080_71722426_71722516_71725580_71725710_71729844_71729915_71730047_71730254_71730704_71730915_71732350_71732521_71734805_71734995_71740062_71740233_71745017_71745580_71746200_71746342_71750042_71750386_71768356
transcript_141663.known	chr9	+	539	5	FSM	ENSG00000155621.15	ENST00000377027.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	46.3060471212994	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCACTGTATTAAAAGTCTG	71911642	False	NA	NA	False	AATGAA	-6	NA	71911801	71972843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71918424_71918556_71947005_71947113_71971504_71971619_71972691
transcript_141665.known	chr9	+	1185	4	FSM	ENSG00000155621.15	ENST00000334731.7	1185	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	10.1980390271856	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGTCGCTTATGTTTAA	71911554	False	NA	9	True	AATAAA	-16	NA	71911638	71973457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71972691
transcript_141668.known	chr9	+	1107	4	FSM	ENSG00000155621.15	ENST00000377031.7	1107	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	38.7327022323801	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAAGTGCTGGGCTTACA	71910426	False	NA	NA	False	NA	NA	NA	71911544	71983250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71947005_71947113_71971504_71971619_71982656
transcript_14167.nnic	chr1	+	469	2	NNC	ENSG00000143476.18	novel	3662	13	NA	NA	-18	-61540	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTATCTAATATAATTTAA	212029149	True	NA	NA	False	AATAAA	-22	NA	212035729	212038886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212035943_212038630
transcript_141671.known	chr9	+	902	3	FSM	ENSG00000155621.15	ENST00000479413.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	40.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATAAAAAGTCAATTTA	71910391	False	NA	-24	True	NA	NA	NA	71911509	71973152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_71911837_71971504_71971619_71972691
transcript_14168.known	chr1	-	483	1	FSM	ENSG00000220749.4	ENST00000401418.2	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4543	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGGTGTTAAAAAAAAAAAA	-212051489	False	NA	NA	False	NA	NA	NA	212052006	212051523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212051500_212052000
transcript_141684.known	chr9	-	1073	7	FSM	ENSG00000107372.13	ENST00000343431.6	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	256.153220206622	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTTATAATTGATATT	-72364603	False	NA	29	True	NA	NA	NA	72364626	72355832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72363469_72363607_72364461
transcript_141688.known	chr9	-	5310	6	FSM	ENSG00000107372.13	ENST00000237937.7	5310	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	263.673737789716	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGTGCCATAAATGTA	-72364569	False	NA	2	True	AATAAA	-20	NA	72364592	72351424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72356102_72356930_72357057_72359417_72359522_72360109_72360222_72360627_72360788_72364461
transcript_141690.known	chr9	+	671	2	FSM	ENSG00000225434.4	ENST00000451596.3	677	2	0	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTGTG	72305417	True	NA	NA	False	AATAAA	-17	NA	72305429	72315464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_72305626_72314989
transcript_141697.known	chr9	-	2096	13	FSM	ENSG00000165092.13	ENST00000297785.8	2096	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.8124228384477	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTACTTTTGAATTT	-72952968	True	NA	-2	True	AATAAA	-16	NA	72953053	72900670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_72901281_72905957_72906033_72909601_72909760_72911957_72912123_72916919_72917105_72918719_72918823_72924018_72924133_72925483_72925613_72927115_72927178_72928891_72929022_72930878_72931020_72940147_72940253_72952934
transcript_141698.known	chr9	+	1401	13	FSM	ENSG00000135046.14	ENST00000257497.11	1401	13	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_12	4.66071048470319	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTGTCATTGACTCTT	73151549	True	NA	8	True	AATAAA	-18	NA	73151864	73170393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_73151925_73158521_73158602_73158694_73158804_73159328_73159424_73160262_73160377_73160802_73160894_73162781_73162862_73163475_73163533_73165115_73165210_73166096_73166193_73167496_73167556_73169031_73169155_73170050
transcript_1417.known	chr1	-	3201	16	FSM	ENSG00000007923.17	ENST00000377577.10	3201	16	0	0	0	0	multi-exon	FALSE	canonical	3	681	junction_10	100.823850793792	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTGGCGCTCTTCCGTG	-6679110	True	NA	-16	True	AATAAA	-16	NA	6701816	6634169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6639901_6640058_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_141703.known	chr9	+	9581	10	FSM	ENSG00000198963.11	ENST00000376896.8	9581	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.89998417217428	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGCCTAATGGTTTTCT	74496587	True	NA	NA	False	ATTAAA	-18	NA	74497334	74693177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_74497984_74630281_74630368_74634630_74634773_74642413_74642816_74660616_74660739_74662473_74662607_74665487_74665596_74667790_74667902_74671788_74671902_74685462
transcript_141707.nnic	chr9	+	611	2	Intergenic	novelGene_70	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	70	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCACAGTAGGTTGTTAT	74952104	True	NA	NA	False	AATAAA	-16	NA	74952282	74953501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr9_+_74952573_74953180
transcript_141709.known	chr9	-	2351	2	FSM	ENSG00000135045.7	ENST00000376854.6	2351	2	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTGTTTATTGTCAA	-74951376	True	NA	-18	True	AATAAA	-15	NA	74952912	74946582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_74948207_74952185
transcript_141716.known	chr9	-	453	2	FSM	ENSG00000106733.21	ENST00000490321.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGTGTCCGTAAAATTT	-75087011	True	NA	NA	False	AATATA	-38	NA	75088135	75087543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75087869_75088007
transcript_141717.known	chr9	-	2050	10	FSM	ENSG00000106733.21	ENST00000376811.5	2050	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	25.8891273236517	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAATCTTTTTTTTATATA	-75087066	True	NA	NA	False	AATAAA	-19	NA	75088190	75060572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75078325_75078583_75083086_75083151_75088007
transcript_141718.known	chr9	-	1754	9	FSM	ENSG00000106733.21	ENST00000361092.9	1754	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	11.5589521583922	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTCAATCTTTTTTTTA	-75087031	True	NA	NA	False	AATAAA	-15	NA	75088155	75060576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069741_75069814_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_141719.known	chr9	-	1121	8	FSM	ENSG00000106733.21	ENST00000376808.8	1121	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	25.0420055270405	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTGGAATTCATTGTG	-75087093	True	NA	-1	True	AATAAA	-19	NA	75088217	75061199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75069103_75069894_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_141720.known	chr9	-	1903	7	FSM	ENSG00000106733.21	ENST00000494066.1	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	10.6052921799554	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATCTGTGGAATTCATTG	-75087085	True	NA	-3	True	AATAAA	-17	NA	75088209	75061201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_75061568_75066756_75066841_75068995_75070043_75077158_75077208_75077489_75077581_75083086_75083151_75088007
transcript_141723.nnic	chr9	+	1267	9	NIC	ENSG00000134996.12	novel	1348	10	NA	NA	-33	-67	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	86.2698346758587	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTGTCCGTTTCTGT	75086784	True	NA	21	True	AATAAA	-18	NA	75088480	75147198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_75088727_75127568_75127620_75130577_75130642_75131769_75131824_75133293_75133402_75134345_75134396_75137537_75137617_75140833_75140933_75146682
transcript_141724.known	chr9	-	962	4	FSM	ENSG00000135002.12	ENST00000483155.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	80.0791275343748	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGTAATCCCAGCACTTTG	-76393811	False	NA	NA	False	AGTAAA	-30	NA	76393957	76386980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76393799
transcript_141725.known	chr9	-	2596	4	FSM	ENSG00000135002.12	ENST00000376736.6	2596	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_3	7.25718035235908	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTTCCCTGTGTCA	-76394280	False	NA	-15	True	AATAAA	-17	NA	76394426	76385525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_76387530_76388553_76388657_76392417_76392570_76394089
transcript_14173.known	chr1	-	2469	8	FSM	ENSG00000065600.13	ENST00000261455.9	2469	8	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_2	14.9734458837187	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCCTGCCACTTTTCTG	-212412946	True	NA	NA	False	ATTAAA	-20	NA	212414886	212363927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212414721
transcript_141730.known	chr9	+	5566	4	FSM	ENSG00000187210.14	ENST00000376730.5	5566	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	34.0978982734518	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGTCTGCAGAAATTT	76457071	True	NA	12	True	ATTAAA	-21	NA	76459181	76507416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_76459306_76460059_76460178_76500915_76501062_76502238
transcript_141733.known	chr9	+	461	3	FSM	ENSG00000187210.14	ENST00000480311.5	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	22.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTTTTAAGGATTCATCAA	76457111	True	NA	NA	False	NA	NA	NA	76459221	76502469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_76459306_76500915_76501062_76502238
transcript_141737.nnic	chr9	+	851	3	NNC	ENSG00000187210.14	novel	5566	4	NA	NA	-15	-40483	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	19	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGTTTGCAAAACTCT	76457096	True	NA	NA	False	AATAAA	-20	NA	76459206	76461933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_76459306_76460059_76460178_76461299
transcript_14174.known	chr1	-	2119	9	FSM	ENSG00000065600.13	ENST00000535273.2	2119	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	57.7597394384705	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAGTGTGACAATATGAA	-212412961	True	NA	-12	True	AATAAA	-16	NA	212414901	212364475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212365377_212375192_212375301_212377561_212377707_212379894_212380038_212385273_212385426_212386890_212387101_212410424_212410522_212413897_212414081_212414721
transcript_141744.known	chr9	-	1264	6	FSM	ENSG00000106772.19	ENST00000492157.5	1264	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.58693797647189	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGCAAGTTGTCT	-76906030	False	NA	NA	False	AAAAAG	-7	NA	76906087	76823247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_76823727_76826579_76826733_76846514_76846679_76850462_76850666_76854103_76854209_76905927
transcript_141745.nic	chr9	+	1162	8	NIC	ENSG00000197969.14	novel	10086	69	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_7	10.6195814514547	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAAATGCCCTCCAA	77174212	True	NA	NA	False	TTTAAA	-23	NA	77177502	77211617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77211212
transcript_141748.known	chr9	+	11145	71	FSM	ENSG00000197969.14	ENST00000376636.7	11145	71	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_29	18.6981173340188	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGAATCAAACCACAAGTT	77177386	False	NA	NA	False	NA	NA	NA	77177444	77417483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_77177805_77199944_77199989_77201364_77201408_77205312_77205409_77205977_77206080_77209422_77209533_77210615_77210676_77212968_77213029_77213233_77213315_77214328_77214387_77219953_77220082_77220276_77220384_77221184_77221357_77225925_77225989_77226465_77226599_77227390_77227486_77228121_77228265_77238001_77238192_77238271_77238387_77247258_77247396_77250096_77250230_77252234_77252353_77260085_77260225_77273279_77273365_77275497_77275653_77276064_77276222_77280158_77280239_77281866_77281927_77282120_77282275_77283546_77283651_77293340_77293509_77295541_77295847_77302914_77303063_77307944_77308099_77313991_77314120_77314494_77314665_77315252_77315471_77316173_77316407_77317605_77317699_77318234_77318592_77319571_77319674_77321168_77321328_77321490_77321747_77323066_77323228_77332009_77332114_77337254_77337538_77339515_77339912_77340177_77340283_77340403_77340551_77344152_77344282_77345008_77345143_77351316_77351447_77353408_77353642_77356713_77356868_77357691_77357839_77358356_77358439_77359332_77359403_77360535_77360642_77365459_77365574_77366726_77366873_77368054_77368137_77369298_77369413_77370256_77370333_77370414_77370579_77370889_77370936_77371025_77371150_77381975_77382088_77403235_77403322_77405863_77405988_77407532_77407608_77415955
transcript_141749.known	chr9	-	2497	7	FSM	ENSG00000156049.7	ENST00000341700.7	2497	7	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_4	7.82446306287034	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGGTTATGTTGTGTT	-77647621	True	NA	-8	True	AATATA	-15	NA	77648322	77423078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_77424170_77425561_77425716_77428906_77429037_77431320_77431450_77434367_77434523_77529068_77529254_77647669
transcript_14175.nnic	chr1	-	681	3	NNC	ENSG00000287445.1	novel	1727	2	NA	NA	-55	308	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	2	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGGTGGTCTTCT	-212432777	True	NA	0	True	AATAAA	-22	NA	212432830	212429960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_212430332_212431740_212431845_212432624
transcript_141752.known	chr9	-	6882	7	FSM	ENSG00000156052.11	ENST00000286548.9	6882	7	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	15.0526852532475	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAAAACCTTTTCCCT	-78030302	True	NA	60	True	AATAAA	-30	NA	78031811	77716096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_77721514_77728513_77728668_77794462_77794593_77797519_77797649_77815615_77815771_77922160_77922346_78031099
transcript_14176.nnic	chr1	-	619	3	NNC	ENSG00000287445.1	novel	1727	2	NA	NA	-34	308	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTAGGTGGTCTTCT	-212432756	True	NA	0	True	AATAAA	-22	NA	212432809	212429960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_212430332_212431740_212431845_212432665
transcript_141761.known	chr9	+	2206	9	FSM	ENSG00000135069.14	ENST00000376588.4	2206	9	0	0	0	0	multi-exon	FALSE	canonical	3	1090	junction_7	128.864209053561	3200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTTGTCAATGAATTTCT	78266249	True	NA	72	True	ATTAAA	-17	NA	78297124	78330093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328050_78328189_78328980
transcript_141762.known	chr9	+	1411	8	FSM	ENSG00000135069.14	ENST00000347159.6	1411	8	0	0	0	0	multi-exon	TRUE	canonical	3	174	junction_7	449.466259431503	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGGCCCTCTAGGTGCTG	78266267	True	NA	NA	False	NA	NA	NA	78297142	78329454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_78297271_78300601_78300663_78301953_78302024_78304734_78304941_78306313_78306487_78308413_78308584_78317675_78317805_78328980
transcript_141766.nic	chr9	+	1021	4	ISM	ENSG00000106829.20	ENST00000461758.6	1536	5	725	-19	28	19	intron_retention	FALSE	canonical	3	175	junction_1	40.0083324654586	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAGTCAGAAAGCACTG	79572643	True	NA	NA	False	NA	NA	NA	79572665	79576821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132
transcript_141767.known	chr9	+	1536	5	FSM	ENSG00000106829.20	ENST00000461758.6	1536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	105.856919943856	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAGCAAAAAAAAAAAAAAAT	79567225	True	NA	NA	False	NA	NA	NA	79571940	79576802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_79572836_79573688_79573787_79574872_79574937_79576132_79576284_79576474
transcript_141768.known	chr9	+	723	6	FSM	ENSG00000106829.20	ENST00000485159.5	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	83.5789447169561	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATAGATTGCCCTGAC	79573265	False	NA	NA	False	NA	NA	NA	79573296	79627752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_79573371_79573688_79573787_79574872_79574937_79576132_79576178_79612655_79612719_79627373
transcript_14177.known	chr1	+	875	4	FSM	ENSG00000117691.10	ENST00000473900.1	875	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	266.653749687159	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAATTCTTCCCCA	212428156	True	NA	3	True	AATAAA	-15	NA	212432972	212446372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212433121_212442545_212442626_212444338_212444443_212445829
transcript_141771.known	chr9	-	1115	6	FSM	ENSG00000196781.16	ENST00000376463.3	1115	6	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	165.306261224432	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGGCTTGTGTTCTAAT	-81687356	False	486	-2	True	AATAAA	-18	NA	81687368	81633468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_81634302_81652213_81652289_81653973_81654037_81685675_81685721_81685832_81685897_81687333
transcript_141773.nnic	chr9	+	440	2	NNC	ENSG00000228430.9	novel	1301	10	NA	NA	258751	1	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	104	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTGTTTTTTGATT	82750632	True	NA	NA	False	AATAAA	-18	NA	82750702	82780195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_82750826_82779878
transcript_141774.nnic	chr9	+	574	2	NNC	ENSG00000228430.9	novel	1301	10	NA	NA	271841	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTGTTTTTTGATT	82763767	True	NA	NA	False	AATAAA	-18	NA	82763792	82780195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_82764050_82779878
transcript_141784.nnic	chr9	-	427	3	Genic_Genomic	ENSG00000233309.1	novel	726	1	NA	NA	-135038	-216	multi-exon	FALSE	canonical	2	6	junction_2	37	126	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTAGAGATTCAGTGTCT	-82879797	False	380	-7	True	AATAAA	-25	NA	82879830	82744282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_-_82744445_82831037_82831127_82879654
transcript_14179.known	chr1	+	845	3	FSM	ENSG00000117691.10	ENST00000479589.5	845	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	272	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGAGAATTCTTCCCCA	212428106	True	NA	3	True	AATAAA	-15	NA	212432922	212446372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212433121_212444338_212444443_212445829
transcript_141793.nnic	chr9	+	1541	2	NNC	ENSG00000286451.1	novel	1262	2	NA	NA	-441	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGAATGAAATTATTTCT	83062942	False	NA	NA	False	AATAAA	-24	NA	83062956	83069143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_83063419_83068064
transcript_141796.known	chr9	+	936	5	FSM	ENSG00000148057.16	ENST00000376419.5	936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.96074487943871	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCATTCCCTGGAAATT	83622972	True	NA	2	True	AATAAA	-16	NA	83623142	83644123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83623222_83628180_83628212_83628872_83628960_83641547_83641592_83643428
transcript_141797.known	chr9	+	607	5	FSM	ENSG00000148057.16	ENST00000530832.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.03118920210451	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAGAGGGACATTTTAT	83622976	True	NA	NA	False	NA	NA	NA	83623146	83643624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83623222_83628006_83628212_83628872_83628960_83641547_83641592_83643428
transcript_141798.known	chr9	+	629	4	FSM	ENSG00000148057.16	ENST00000405990.3	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	7.40870359029762	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAAATGTTTCTAAAGGC	83622995	True	NA	NA	False	NA	NA	NA	83623165	83643870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83623222_83628872_83628960_83641547_83641592_83643428
transcript_141799.known	chr9	-	3868	11	FSM	ENSG00000135018.14	ENST00000376395.9	3868	11	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_4	294.90996931267	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGATTTGTCTTGCCTCTT	-83687490	True	NA	-6	True	AATAAA	-16	NA	83707958	83659967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83666349_83666434_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_14180.nnic	chr1	+	762	3	Antisense	novelGene_ENSG00000237980.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTGACAAAAACAGTTTA	NA	False	NA	NA	False	AATAAA	-13	NA	212658018	212675385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_212658118_212673924_212674066_212674863
transcript_141801.known	chr9	-	2299	10	FSM	ENSG00000135018.14	ENST00000257468.11	2299	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	330.727406309109	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATCATTTGCACTCTAT	-83687466	True	NA	-22	True	AATAAA	-15	NA	83707934	83661428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83661940_83663874_83664044_83665029_83665146_83669184_83669328_83677726_83677962_83678440_83678600_83679774_83680038_83682950_83683067_83686003_83686156_83707499
transcript_141805.known	chr9	+	489	2	FSM	ENSG00000254473.2	ENST00000524818.1	489	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGAAAAACAAAAAAATTG	83707423	False	NA	NA	False	AAAAAG	-28	NA	83707593	83712869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83707711_83712497
transcript_141806.known	chr9	+	1017	2	FSM	ENSG00000254473.2	ENST00000531661.2	1175	2	40	118	40	-118	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAACGCTTCCACAACC	83708286	True	NA	NA	False	NA	NA	NA	83708317	83713378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83708454_83712497
transcript_141807.known	chr9	-	1801	13	FSM	ENSG00000165113.13	ENST00000376371.7	1801	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	13.8831932766045	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-83817027	True	NA	-4	True	AATAAA	-18	NA	83817769	83739424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83768817_83768971_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_141808.known	chr9	-	1511	12	FSM	ENSG00000165113.13	ENST00000376365.7	1511	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	10.0995049383621	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATATGTTTGATTTGTTA	-83816890	False	NA	-4	True	AATAAA	-18	NA	83817632	83739424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83739745_83741951_83742030_83742529_83742601_83748308_83748373_83753257_83753360_83780381_83780405_83784714_83784839_83788600_83788679_83799184_83799329_83806301_83806561_83816995_83817128_83817516
transcript_141814.nnic	chr9	-	1505	3	NNC	ENSG00000165115.15	novel	4400	16	NA	NA	-93	-15773	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	18.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCTCATTAAATGCATG	-83920800	True	NA	NA	False	AATAAA	-26	NA	83921558	83914468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_83915679_83920105_83920213_83921370
transcript_141817.nnic	chr9	-	577	3	NNC	ENSG00000165115.15	novel	7257	18	NA	NA	-93	-20836	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_2	7.5	154	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTGTGTTACTTAATG	-83920800	True	NA	NA	False	AATAAA	-17	NA	83921558	83919531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_83919814_83920105_83920213_83921370
transcript_141819.known	chr9	-	2067	5	FSM	ENSG00000165118.15	ENST00000314700.5	2067	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	22.8623598956888	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGGAATGGATTATTT	-83956961	True	NA	-8	True	AATAAA	-20	NA	83956986	83938313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163_83956255_83956896
transcript_141820.known	chr9	-	2468	4	FSM	ENSG00000165118.15	ENST00000376344.8	2468	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	5.43650214343336	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAATGGATTATTTCAT	-83955483	True	NA	-5	True	AATAAA	-23	NA	83956742	83938310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83939744_83944793_83944990_83955380_83955641_83956163
transcript_141822.nnic	chr9	-	1178	3	NNC	ENSG00000165118.15	novel	2468	4	NA	NA	-1	1678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	23.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGTCATGTGTTTTTAACG	-83955484	True	NA	NA	False	AATAAA	-28	NA	83956743	83951969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_83952308_83955380_83955641_83956163
transcript_141823.known	chr9	-	620	3	FSM	ENSG00000165118.15	ENST00000376340.2	620	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGGCGTGGTGGCTC	-83956302	False	NA	NA	False	AATAAA	-18	NA	83956327	83953647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83953844_83955380_83955641_83956163
transcript_141857.known	chr9	-	2928	17	FSM	ENSG00000165119.21	ENST00000376281.8	2928	17	0	0	0	0	multi-exon	TRUE	canonical	3	5662	junction_16	1090.54421620584	5463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83963568	True	NA	-4	True	AATATA	-14	NA	83980604	83968082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980502
transcript_141858.known	chr9	-	2889	17	FSM	ENSG00000165119.21	ENST00000376263.8	2889	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1552.19392614937	5461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGTGTGAAGTGTTT	-83943539	True	NA	-4	True	AATATA	-14	NA	83980215	83968082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969441_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_141859.known	chr9	-	2652	16	FSM	ENSG00000165119.21	ENST00000351839.7	2652	16	0	0	0	0	multi-exon	FALSE	canonical	3	6067	junction_1	927.935907748422	4745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAACACCCATGATGCTAG	-83978437	False	4887	-25	True	AATAAA	-1	NA	83978452	83968196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372
transcript_141860.known	chr9	-	2038	17	FSM	ENSG00000165119.21	ENST00000360384.9	2038	17	0	0	0	0	multi-exon	FALSE	canonical	3	3164	junction_16	1584.04012240063	10148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTGGTCATTTTTTT	-83943574	True	NA	-18	True	AATAAA	-14	NA	83980250	83968908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83969381_83970161_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83973901_83973974_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_141861.known	chr9	-	1283	15	FSM	ENSG00000165119.21	ENST00000457156.5	1283	15	0	0	0	0	multi-exon	FALSE	canonical	3	1279	junction_8	2420.56240829461	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGGTGGTCAGCGGATT	-83943514	True	NA	NA	False	TTTAAA	-32	NA	83980190	83970312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_83970332_83970736_83970820_83970896_83970913_83971272_83971357_83971671_83971727_83971881_83972190_83972843_83972973_83973285_83973400_83974516_83974590_83975461_83975506_83976994_83977052_83977688_83977787_83978194_83978280_83978372_83978453_83980152
transcript_141864.nnic	chr9	+	3465	4	NNC	ENSG00000178966.17	novel	3300	3	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	113.373522286094	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977492	True	NA	110	True	ATTAAA	-21	NA	83980715	84004074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_83980892_83988328_83988405_83999708_83999798_84000950
transcript_141867.known	chr9	+	3300	3	FSM	ENSG00000178966.17	ENST00000445877.6	3300	3	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_1	46.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977581	True	NA	110	True	ATTAAA	-21	NA	83980804	84004074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83980892_83999708_83999798_84000950
transcript_141870.known	chr9	+	3420	3	FSM	ENSG00000178966.17	ENST00000325875.7	3420	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	111.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTTTTATTTTA	83977574	True	NA	110	True	ATTAAA	-21	NA	83980797	84004074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_83981005_83999708_83999798_84000950
transcript_141877.nnic	chr9	-	697	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-13968	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	-85458261	False	NA	-5	True	ATTAAA	-15	NA	85458377	85402167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_85402688_85457364_85457476_85458311
transcript_141879.nnic	chr9	-	749	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-15959	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	10	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	-85460252	False	NA	-5	True	ATTAAA	-15	NA	85460368	85402167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_85402688_85457364_85457476_85460250
transcript_141880.nnic	chr9	-	705	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-15997	-2	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	9	110	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	-85460290	False	NA	-5	True	ATTAAA	-15	NA	85460406	85402167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_85402688_85457364_85457476_85460332
transcript_141881.nnic	chr9	-	879	3	NNC	ENSG00000285634.3	novel	4264	3	NA	NA	-16603	-2	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	3.5	210	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGACTTGTTTGTTTTCC	NA	False	NA	-5	True	ATTAAA	-15	NA	85461012	85402167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_85402688_85457364_85457476_85460764
transcript_141887.known	chr9	+	5813	23	FSM	ENSG00000135040.16	ENST00000361671.10	5813	23	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	32.4030658686173	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGATCATAAAATGCAAG	85937574	True	NA	NA	False	NA	NA	NA	85941145	86025462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_14189.known	chr1	-	836	3	FSM	ENSG00000123685.9	ENST00000243440.2	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	2	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCGTCTTCTGTCTTCT	-212699590	False	NA	-1	True	AATACA	-16	NA	212699840	212686416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212686980_212696960_212697066_212699672
transcript_141890.nnic	chr9	+	2736	23	NNC	ENSG00000135040.16	novel	5813	23	NA	NA	9	-3164	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	57.2110779309089	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTGCTGGAGATGAAAA	85937619	True	NA	74	True	AATAAA	-20	NA	85941190	86022298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_85941406_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538_86016676_86017497_86017566_86018254_86018396_86018698_86018822_86020888_86020970_86021900
transcript_141901.nic	chr9	+	1849	18	ISM	ENSG00000135040.16	ENST00000361671.10	5813	23	-20	8796	-20	-8796	5prime_fragment	TRUE	canonical	3	177	junction_1	30.0570392010978	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAAGGTGCTGTGGAT	85937554	True	NA	NA	False	AGTAAA	-14	NA	85941125	86016666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85996398_85996578_86003584_86003645_86007357_86007465_86009864_86009932_86013045_86013145_86013718_86013898_86016538
transcript_141925.nic	chr9	+	1183	4	ISM	ENSG00000135040.16	ENST00000416045.4	690	7	2	7271	2	-7271	5prime_fragment	FALSE	canonical	3	177	junction_1	31.0304509939654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTTTTCTTTCTAAGT	85937612	True	NA	NA	False	AAAACA	-11	NA	85941183	85959401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471
transcript_141926.known	chr9	+	1797	12	FSM	ENSG00000135040.16	ENST00000376040.2	1797	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	91.0936308793148	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTTGTACTGCATTCAAA	85941453	True	NA	NA	False	AATAAA	-12	NA	85941528	85987041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_85941875_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85974966_85975034_85975113_85975158_85976684_85976736_85977362_85977447_85978266_85978382_85986472
transcript_141927.known	chr9	+	690	7	FSM	ENSG00000135040.16	ENST00000416045.4	690	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	96.4140377054434	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTAAGTTGACACTTCTGT	85937610	True	NA	NA	False	AATATA	-38	NA	85941181	85966672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_85941274_85942154_85942284_85956359_85956394_85958471_85958587_85959792_85959868_85962012_85962181_85966595
transcript_141928.known	chr9	-	3046	10	FSM	ENSG00000135052.16	ENST00000388712.7	3046	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	363.547643217349	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTTGTCACAGCTCTG	-86091481	True	NA	NA	False	AATAAA	-18	NA	86099558	86026145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86099410
transcript_141929.known	chr9	-	3022	10	FSM	ENSG00000135052.16	ENST00000388711.7	3022	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	472.028430824005	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACTTGTCACAGCTCT	-86099797	True	NA	NA	False	AATAAA	-17	NA	86100149	86026146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86027894_86033281_86033396_86035367_86035626_86036347_86036508_86040738_86040869_86046469_86046573_86052536_86052592_86077411_86077592_86079191_86079342_86100024
transcript_141938.known	chr9	-	813	4	FSM	ENSG00000135070.15	ENST00000311534.6	813	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	192.236544103583	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGAGACAGGACATCGTG	-86278716	False	3392	81	True	NA	NA	NA	86282108	86265678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86281968
transcript_141943.known	chr9	-	1967	4	FSM	ENSG00000135070.15	ENST00000375991.9	1967	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	32.2214559295855	947	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCTTTTATTATTGAGGG	-86279146	True	NA	NA	False	ATTAAA	-30	NA	86282538	86264545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86266192_86272006_86272113_86274188_86274243_86282377
transcript_141947.nic	chr9	-	1749	10	ISM	ENSG00000083223.18	ENST00000277141.10	5724	28	-40	49603	4	-457	5prime_fragment	FALSE	canonical	3	73	junction_1	7.57350808353421	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACCTAACCAGAACTGAC	-86353140	True	NA	-7	True	ATTAAA	-23	NA	86354450	86337335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_86337539_86338822_86338950_86340035_86340106_86341001_86341054_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_141950.known	chr9	-	4939	20	FSM	ENSG00000083223.18	ENST00000375960.6	4939	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	23.3431584643427	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATCTACATTATTTTCT	-86353144	True	NA	-24	True	AATAAA	-21	NA	86354454	86287732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_86288745_86301275_86301602_86303085_86303202_86304855_86304948_86305191_86305240_86308428_86308607_86309211_86309290_86309462_86309577_86309927_86310018_86310705_86310810_86317218_86317277_86322872_86323961_86325333_86325515_86328339_86328493_86343074_86343164_86344976_86345155_86345668_86345786_86346298_86346481_86352679_86353231_86354270
transcript_141951.known	chr9	+	1005	2	FSM	ENSG00000226237.3	ENST00000654660.2	1042	2	37	0	-33	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCACTTCTTGTCTTCTA	NA	False	NA	NA	False	AATAAA	-29	NA	86948665	86951543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_86948994_86950866
transcript_141952.nnic	chr9	-	516	2	NNC	ENSG00000269994.3	novel	2028	2	NA	NA	-3	2235	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTTGGGATTGTTACAAG	-87041724	True	NA	NA	False	AATAAA	-18	NA	87042130	87006204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_87006461_87041870
transcript_141953.known	chr9	-	2245	2	FSM	ENSG00000269994.3	ENST00000669870.1	2245	2	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAAATTACTTTTTATCCA	NA	False	NA	NA	False	AATAGA	-5	NA	87042419	87008514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87010211_87041870
transcript_141955.nnic	chr9	-	1151	2	NNC	ENSG00000269994.3	novel	2028	2	NA	NA	-1	-4215	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGTAATTACACAGCAGT	-87041722	True	NA	NA	False	ATTAAA	-17	NA	87042128	87013247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_87014141_87041870
transcript_141957.known	chr9	+	3239	2	FSM	ENSG00000204446.4	ENST00000623052.1	3239	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTGTTGGTAATCACAA	87148611	False	NA	NA	False	NA	NA	NA	87148643	87159556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87148899_87156572
transcript_141960.known	chr9	+	2499	16	FSM	ENSG00000196730.13	ENST00000469067.5	2499	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_2	35.9767826367074	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAGACAATAAACCACTC	87497562	True	NA	NA	False	AATAGA	-34	NA	87497735	87650511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87498108_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920
transcript_141964.known	chr9	+	626	3	FSM	ENSG00000196730.13	ENST00000495182.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	236	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAGTTGTGTTTTATCT	87493929	True	NA	4	True	AATAAA	-14	NA	87497834	87507002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87498108_87498969_87499140_87506819
transcript_141965.known	chr9	+	5772	26	FSM	ENSG00000196730.13	ENST00000622514.4	5772	26	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	99.0735161382698	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTTTGATCTTTAATT	87498523	False	NA	18	True	AATAAA	-18	NA	87498534	87708633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87498637_87498969_87499140_87604953_87605176_87637942_87638082_87639353_87639484_87639649_87639699_87639788_87639816_87640297_87640451_87640801_87640848_87641968_87642059_87643375_87643469_87645894_87646015_87646460_87646560_87647304_87647404_87648780_87648880_87649920_87650119_87651526_87651725_87658028_87658128_87668596_87668675_87681403_87681627_87686550_87686740_87697006_87697205_87698655_87698795_87700116_87700238_87703028_87703218_87706131
transcript_141967.nnic	chr9	+	879	3	Genic_Genomic	ENSG00000219928.2_ENSG00000288968.1	novel	174	1	NA	NA	25	101	multi-exon	FALSE	non_canonical	0	0	junction_1	0	569	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGTTGAATAAACGAAGGC	87410879	False	NA	NA	False	AATAAA	-26	NA	87410916	87525576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_87411295_87413277_87413465_87525262
transcript_141968.known	chr9	+	174	1	FSM	ENSG00000219928.2	ENST00000401543.2	174	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	81	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTTCCTTCAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	87525301	87525475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87525300_87525500
transcript_141969.known	chr9	+	1536	9	FSM	ENSG00000135047.16	ENST00000340342.11	1536	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	83.7114650152534	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTGGTGGGGCTTCTTTCT	87723398	True	NA	31	True	AATAAA	-16	NA	87726121	87731391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141971.known	chr9	+	1593	9	FSM	ENSG00000135047.16	ENST00000676881.1	1593	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	83.4966316685889	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	87723398	True	NA	33	True	AATAAA	-18	NA	87726121	87731393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726309_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141972.known	chr9	+	1613	9	FSM	ENSG00000135047.16	ENST00000677262.1	1613	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.7144514107331	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	87723395	True	NA	33	True	AATAAA	-18	NA	87726118	87731393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726399_87727360_87727396_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141973.known	chr9	+	1719	9	FSM	ENSG00000135047.16	ENST00000677821.1	1719	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.9270516579726	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	87723362	True	NA	33	True	AATAAA	-18	NA	87726085	87731393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726399_87727360_87727469_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141975.known	chr9	+	1654	8	FSM	ENSG00000135047.16	ENST00000343150.10	1654	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	46.7756259570459	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	87723395	True	NA	10	True	AATAAA	-27	NA	87726118	87731469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726399_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141977.known	chr9	+	1813	8	FSM	ENSG00000135047.16	ENST00000676531.1	1813	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	65.8870400064863	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	NA	False	NA	33	True	AATAAA	-18	NA	87725734	87731393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726250_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141982.known	chr9	+	1373	7	FSM	ENSG00000135047.16	ENST00000677864.1	1373	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.7272999321427	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGCCAGTGGCTCAC	87723395	True	NA	10	True	AATAAA	-27	NA	87726118	87731469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380_87730499_87731007
transcript_141986.known	chr9	+	1010	6	FSM	ENSG00000135047.16	ENST00000679030.1	1010	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	81.3815703952682	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGGGGCTTCTTTCTAT	87723446	True	NA	33	True	AATAAA	-18	NA	87726169	87731393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87729572_87729736_87730380_87730499_87731007
transcript_141990.known	chr9	+	1897	7	FSM	ENSG00000135047.16	ENST00000678649.1	1897	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	51.4252423966631	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAAATTTTTACCTGTT	87723395	True	NA	-12	True	TTTAAA	-5	NA	87726118	87731348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_87726254_87727593_87727730_87728026_87728150_87728249_87728397_87728584_87728810_87729572_87729736_87730380
transcript_141994.known	chr9	-	2149	8	FSM	ENSG00000156345.18	ENST00000325303.9	2149	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	9.89743318610787	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGACTAGAGAAACTTATTC	-87974262	True	NA	NA	False	AATAAA	-29	NA	87974533	87966440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967660_87969193_87969350_87969795_87969920_87970567_87970631_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_141997.known	chr9	-	1907	6	FSM	ENSG00000156345.18	ENST00000375871.8	1907	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	10.2878569196893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGATAAAAACAGACTAGAGA	-87974466	False	NA	NA	False	AATAAA	-20	NA	87974487	87966449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967660_87969193_87969350_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_141998.known	chr9	-	1860	7	FSM	ENSG00000156345.18	ENST00000605159.5	1860	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	13.8041861605658	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTTTTTCCTTATT	-87974234	True	NA	NA	False	AATAAA	-17	NA	87974505	87966610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_87967632_87969193_87969350_87969795_87969920_87970775_87970898_87971146_87971336_87973921_87974036_87974371
transcript_141999.known	chr9	+	494	1	FSM	ENSG00000217716.3	ENST00000439253.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATTGGAGAGGATTCTT	NA	False	NA	NA	False	NA	NA	NA	88016299	88016793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88016300_88016800
transcript_142000.nnic	chr9	-	617	3	NNC	ENSG00000287750.2	novel	588	3	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAATAATTCCTGCTT	-88077026	False	61	NA	False	AATAAA	-17	NA	88077087	88066434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_88066782_88068643_88068742_88076915
transcript_142005.nnic	chr9	-	603	3	NNC	ENSG00000287750.2	novel	484	2	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAATAATTCCTGCTT	-88077816	True	NA	NA	False	AATAAA	-17	NA	88077877	88066434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_88066782_88077382_88077484_88077722
transcript_142006.nnic	chr9	-	728	2	FSM	ENSG00000287750.2	ENST00000689352.1	1595	2	-243	1110	-243	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAATAATTCCTGCTT	-88077235	False	NA	NA	False	AATAAA	-17	NA	88077296	88066434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_88066782_88076915
transcript_142008.nnic	chr9	-	535	2	FSM	ENSG00000287750.2	ENST00000692550.1	484	2	-51	0	-51	0	multi-exon	FALSE	canonical	3	10	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTAATAATTCCTGCTT	NA	False	NA	NA	False	AATAAA	-17	NA	88077910	88066434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_88066782_88077722
transcript_142009.known	chr9	+	4459	6	FSM	ENSG00000106723.17	ENST00000375859.4	4459	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_4	95.975830290756	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTGACTGTAAAGTTTGT	88375091	True	NA	18	True	AATAAA	-15	NA	88388443	88478694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_142015.known	chr9	+	706	5	FSM	ENSG00000106723.17	ENST00000485565.6	706	5	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	289.248163347669	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCGTCTATTTCATC	88375099	True	NA	NA	False	NA	NA	NA	88388451	88475203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88388539_88426381_88426592_88448940_88448990_88468371_88468606_88475077
transcript_142017.known	chr9	+	814	5	FSM	ENSG00000106723.17	ENST00000485804.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	265.796327100282	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTCTACGATTTGGTG	88375077	True	NA	NA	False	NA	NA	NA	88388429	88475245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88388539_88448940_88448990_88462495_88462750_88468371_88468606_88475077
transcript_142018.nic	chr9	+	609	4	ISM	ENSG00000106723.17	ENST00000375859.4	4459	6	-32	15976	-18	80	5prime_fragment	FALSE	canonical	3	632	junction_3	75.8302197162993	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCGCTTGAAGTCCTCCC	88375059	True	NA	19	True	AATAAA	-13	NA	88388411	88462718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_88388539_88426381_88426592_88448940_88448990_88462495
transcript_142030.known	chr9	+	994	3	FSM	ENSG00000130045.17	ENST00000649870.2	989	3	0	-5	0	5	multi-exon	FALSE	canonical	1	1	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCTATTGCCTTCTTTCT	88533936	True	NA	NA	False	AATAAA	-28	NA	88534032	88544978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88534089_88535398_88535737_88544378
transcript_142032.known	chr9	+	1234	2	FSM	ENSG00000130045.17	ENST00000375854.8	1154	2	-73	-7	0	7	multi-exon	FALSE	canonical	2	2	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATTGCCTTCTTTCTCA	88535008	False	NA	NA	False	AATAAA	-30	NA	88535104	88544980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_88535737_88544378
transcript_142035.nnic	chr9	-	564	5	NNC	ENSG00000148082.10	novel	9819	12	NA	NA	-132158	-74052	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.06917857360853	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGTGTTTCTTAGTCA	-89310950	False	NA	NA	False	AATAGA	-23	NA	89310976	89111417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_89111571_89112555_89112627_89288486_89288618_89308857_89308947_89310856
transcript_142037.known	chr9	-	9819	12	FSM	ENSG00000148082.10	ENST00000375835.9	9819	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8.06891802018889	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCATTTGGATGATGGA	-89177929	True	NA	0	True	AATAAA	-18	NA	89178818	89005770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_89013576_89037992_89038289_89042025_89042185_89045745_89045834_89046843_89046995_89052036_89052164_89065528_89065581_89071198_89071253_89075108_89075229_89077839_89077904_89112555_89112627_89177986
transcript_142042.known	chr9	-	583	2	FSM	ENSG00000224945.1	ENST00000456944.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTATGTCCATGGAGTT	NA	False	NA	-1	True	ATTAAA	-22	NA	89109298	89088603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_89088936_89109047
transcript_142055.known	chr9	+	616	3	FSM	ENSG00000123975.5	ENST00000314355.7	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	5422	junction_1	153.5	65446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCAAGTTTTTGA	89279518	True	NA	26	True	AATAAA	-19	NA	89311194	89316703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89311352_89315169_89315298_89316372
transcript_142056.known	chr9	+	3481	17	FSM	ENSG00000187742.15	ENST00000375807.8	3481	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_6	64.5822815774575	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGGCTTCTCAGTGGTC	89308888	True	NA	36	True	AATAAA	-36	NA	89318499	89359663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_14206.known	chr1	-	13115	6	FSM	ENSG00000117697.15	ENST00000366977.8	13115	6	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_2	24.5519856630783	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTAGTCTGTTCTTTTCA	-212785388	True	NA	0	True	AATAAA	-23	NA	212791777	212726152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212738687_212739533_212739602_212782371_212782427_212784362_212784494_212787558_212787638_212791529
transcript_142061.known	chr9	+	3320	17	FSM	ENSG00000187742.15	ENST00000339901.8	3320	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	87.3012027408558	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTCAGACTCTGGTG	89308907	True	NA	15	True	AATAAA	-15	NA	89318518	89359642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_142063.known	chr9	+	3584	17	FSM	ENSG00000187742.15	ENST00000534113.6	3584	17	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.438083383496	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGCTTCTCAGTGGT	89318773	True	NA	35	True	AATAAA	-35	NA	89318850	89359662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_89319068_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457_89338581_89339863_89339954_89341346_89341480_89346881_89347049_89348078_89348215_89349775_89349930_89350631_89350853_89357410_89357566_89357998_89358192_89358720
transcript_14207.known	chr1	-	685	3	FSM	ENSG00000117697.15	ENST00000487995.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	21	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGAAAGTTATAGTGAGT	-212785393	True	NA	NA	False	AATGAA	-3	NA	212791782	212784140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212784494_212787558_212787638_212791529
transcript_142073.nic	chr9	+	1249	8	ISM	ENSG00000187742.15	ENST00000375807.8	3481	17	-30	21153	-30	0	5prime_fragment	FALSE	canonical	3	131	junction_6	64.8181128628568	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308858	True	NA	NA	False	AAGAAA	-4	NA	89318469	89338510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_142074.nic	chr9	+	1135	8	NIC	ENSG00000187742.15	novel	3481	17	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_6	66.4889126862824	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308858	True	NA	NA	False	AAGAAA	-4	NA	89318469	89338510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_89318613_89319651_89319798_89325426_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_142075.nic	chr9	+	1128	8	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-49	21132	-30	0	5prime_fragment	FALSE	canonical	3	78	junction_2	96.9159113745056	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308858	True	NA	NA	False	AAGAAA	-4	NA	89318469	89338510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334521_89334731_89338457
transcript_142077.nic	chr9	+	1014	8	NIC	ENSG00000187742.15	novel	3320	17	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_2	97.8401445090461	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAGAAAAAGAAAGAAAAAT	89308858	True	NA	NA	False	AAGAAA	-4	NA	89318469	89338510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_89318613_89319651_89319798_89325547_89325677_89325896_89326039_89328659_89328887_89332907_89332987_89334635_89334731_89338457
transcript_142086.nic	chr9	+	864	2	ISM	ENSG00000187742.15	ENST00000339901.8	3320	17	-49	39270	-30	-10073	5prime_fragment	FALSE	canonical	3	320	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCCCGTTTCAAG	89308858	True	NA	NA	False	NA	NA	NA	89318469	89320372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_89318613_89319651
transcript_142087.nnic	chr9	+	1209	5	NNC	ENSG00000237372.4	novel	1570	5	NA	NA	-905	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	3.41869858279434	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTTGGGTCTCTAGGTG	89695446	True	NA	9	True	AATAAA	-24	NA	89695506	89719759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_89695629_89696812_89697089_89698032_89698200_89701917_89701989_89719186
transcript_142089.nnic	chr9	+	1410	4	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	10	junction_1	40.6639343344389	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGCATATGGATTTC	90412985	False	NA	18	True	AATAAA	-29	NA	90413023	90429456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_+_90413293_90415022_90415122_90427768_90427834_90428479
transcript_142098.nnic	chr9	+	1430	3	Antisense	novelGene_ENSG00000231107.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	44.5	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTTGCATATGGATTTC	NA	False	NA	18	True	AATAAA	-29	NA	90412904	90429456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr9_+_90413293_90427768_90427834_90428479
transcript_142106.known	chr9	-	1434	3	FSM	ENSG00000230537.2	ENST00000665623.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTCCAATTATCAGAAA	-91118076	True	NA	NA	False	AATGAA	-3	NA	91118087	91104326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_91105383_91106464_91106672_91117916
transcript_142107.nnic	chr9	+	547	3	Fusion	ENSG00000235641.5_ENSG00000229694.8	novel	561	4	NA	NA	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCTGACTTTACAACCTT	NA	False	NA	NA	False	AATAAA	-19	NA	91159558	91182717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr9_+_91159808_91170672_91170722_91182468
transcript_14211.known	chr1	+	1381	10	FSM	ENSG00000203705.11	ENST00000532324.5	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	109.276520921428	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGCAACCTCCACTTCCCA	212789564	True	NA	NA	False	NA	NA	NA	212791827	212815597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812226_212812329_212815012
transcript_142111.known	chr9	-	1574	10	FSM	ENSG00000148090.12	ENST00000375731.9	1574	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	28.9473766908843	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGGAATTTTTCTCTTAC	-91355293	True	NA	93	True	AATAAA	-17	NA	91361918	91213822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_91214426_91216058_91216107_91217276_91217328_91220804_91220993_91296020_91296078_91297983_91298077_91325317_91325405_91355882_91355971_91356087_91356156_91361627
transcript_142113.known	chr9	-	370	2	FSM	ENSG00000169071.15	ENST00000493846.1	370	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATGATGAGTTATTGATT	-91948699	False	NA	NA	False	ATTAAA	-21	NA	91948715	91923667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_91923929_91948606
transcript_14212.known	chr1	+	2527	10	FSM	ENSG00000203705.11	ENST00000366974.9	2527	10	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_8	77.166646668264	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTATTTCTTTTCCCTA	212789630	True	NA	15	True	ATTAAA	-26	NA	212791893	212816830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_142120.known	chr9	-	2783	15	FSM	ENSG00000090054.16	ENST00000262554.7	2783	15	0	0	0	0	multi-exon	FALSE	canonical	3	688	junction_4	56.4137864898506	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAGTCTATTTGCATAT	-92105036	True	NA	-11	True	AATAAA	-14	NA	92115413	92031146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92032559_92034809_92034884_92038247_92038366_92045998_92046054_92047171_92047269_92047612_92047709_92049959_92050068_92055404_92055495_92059178_92059309_92067965_92068099_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_142128.known	chr9	-	946	6	FSM	ENSG00000090054.16	ENST00000337841.4	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	298.956451678167	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTGCTGGAAATAGCAT	-92105006	True	NA	NA	False	AATAAA	-27	NA	92115383	92079060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92079567_92080015_92080089_92080869_92080964_92108739_92108835_92112454_92112563_92115313
transcript_142130.known	chr9	-	686	5	FSM	ENSG00000090054.16	ENST00000488921.6	1311	5	0	625	0	-625	multi-exon	FALSE	canonical	3	7	junction_1	323.487538399859	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACTTTTATATATTCT	-92105005	True	NA	NA	False	NA	NA	NA	92115382	92107800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92108070_92108739_92108835_92112454_92112563_92114921_92115067_92115313
transcript_142132.nic	chr9	-	1179	4	FSM	ENSG00000090054.16	ENST00000692363.1	1197	4	18	0	-2	0	multi-exon	FALSE	canonical	3	7	junction_1	377.325971659637	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTATCTCCGTGTTCTTC	-92105018	True	NA	NA	False	AATAAA	-17	NA	92115395	92107175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92108070_92108739_92108835_92112454_92112563_92115313
transcript_142134.known	chr9	+	456	2	FSM	ENSG00000225511.7	ENST00000444476.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGCAATTAAATCTCATT	92147683	False	NA	NA	False	AATAAA	-18	NA	92147711	92148306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92147783_92147921
transcript_142136.nnic	chr9	+	651	2	NNC	ENSG00000225511.7	novel	467	2	NA	NA	-111	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGCAGGCAATTAAATCTC	92147452	True	NA	NA	False	AATAAA	-15	NA	92147480	92148303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_92147750_92147921
transcript_142137.known	chr9	+	467	2	FSM	ENSG00000225511.7	ENST00000421234.5	467	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGGCAATTAAATCTCATT	92147563	False	NA	NA	False	AATAAA	-18	NA	92147591	92148306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92147674_92147921
transcript_142141.known	chr9	-	4656	34	FSM	ENSG00000196305.19	ENST00000375643.7	4656	34	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_33	329.625992248549	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-92275074	True	NA	-4	True	AATAAA	-15	NA	92293700	92210206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293440
transcript_142142.known	chr9	-	4483	34	FSM	ENSG00000196305.19	ENST00000443024.7	4483	34	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_33	278.138997826679	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGGTGATAATTTGAGT	-92275071	True	NA	-4	True	AATAAA	-15	NA	92293697	92210206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92251807_92251886_92253361_92253454_92256679_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_142147.nic	chr9	-	2606	20	ISM	ENSG00000196305.19	ENST00000683469.1	4300	34	-18	45993	0	-15579	5prime_fragment	FALSE	canonical	3	1048	junction_19	116.239007760767	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGGCCATGGAGGCG	-92275108	True	NA	NA	False	AATATA	-19	NA	92293734	92256341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_92256801_92258853_92258999_92260150_92260235_92262968_92263056_92264928_92265124_92265479_92265554_92268173_92268301_92269884_92269984_92270984_92271077_92271532_92271656_92274425_92274522_92277862_92277924_92278198_92278287_92280745_92280894_92285721_92285840_92286535_92286619_92287790_92287911_92288125_92288283_92289300_92289427_92293610
transcript_14215.known	chr1	+	2321	10	FSM	ENSG00000203705.11	ENST00000366973.8	2321	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_8	83.003049177964	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAAAGTGATTTTATGAAAT	212789620	True	NA	14	True	AATAAA	-10	NA	212791883	212816617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812250_212812329_212815012
transcript_142152.nnic	chr9	-	2184	15	NNC	ENSG00000196305.19	novel	4406	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	132	junction_12	523.517328134555	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275108	True	NA	-18	True	AATAAA	-12	NA	92293734	92210344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92288217_92288283_92289300_92289427_92293610
transcript_142154.nnic	chr9	-	2259	15	NNC	ENSG00000196305.19	novel	4406	33	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_12	552.4145007259	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275108	True	NA	-18	True	AATAAA	-12	NA	92293734	92210344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92288217_92288283_92289300_92289427_92293610
transcript_142158.nnic	chr9	-	1975	13	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	147	junction_12	515.860627980078	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275090	True	NA	-18	True	AATAAA	-12	NA	92293716	92210344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250760_92293610
transcript_142159.nnic	chr9	-	2051	13	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_12	555.185329417124	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275091	True	NA	-18	True	AATAAA	-12	NA	92293717	92210344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92242153_92242331_92243215_92243312_92244958_92245072_92247376_92247552_92249857_92249942_92250186_92250290_92250712_92250835_92293610
transcript_142165.nnic	chr9	-	1406	8	NIC	ENSG00000196305.19	novel	4186	33	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	918.877731645667	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAATGTGTTGAAAGTAAT	-92275091	True	NA	-18	True	AATAAA	-12	NA	92293717	92210344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_92210890_92222519_92222673_92223345_92223490_92229000_92229127_92240855_92240962_92250186_92250290_92250712_92250835_92293610
transcript_142167.known	chr9	-	4053	18	FSM	ENSG00000198000.12	ENST00000536593.5	4053	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	78.6010468599118	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCAGCCTAGGCTTTGT	-92321609	True	NA	-18	True	AATAAA	-19	NA	92325350	92297483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323235_92323352_92323440_92323504_92324022_92324210_92325317
transcript_142169.known	chr9	-	4075	17	FSM	ENSG00000198000.12	ENST00000442668.7	4075	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	59.7821239481335	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGTTTTGGTGAATG	-92321609	True	NA	-1	True	GATAAA	-24	NA	92325350	92297357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325305
transcript_142170.known	chr9	-	3136	13	FSM	ENSG00000198000.12	ENST00000432670.6	3136	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	59.477061404657	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACGAAAAAAGAAAAGGG	-92321617	True	NA	NA	False	AGTAAA	-3	NA	92325358	92301816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325179
transcript_142176.known	chr9	-	1098	7	FSM	ENSG00000198000.12	ENST00000421075.6	1098	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.3079331296518	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGATTCCATTACTCCTT	-92325549	True	NA	NA	False	AATAGA	-43	NA	92325594	92315851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92325317
transcript_142182.known	chr9	-	4343	17	FSM	ENSG00000198000.12	ENST00000545558.5	4343	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	68.0833301458588	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTATTTTCCAGCCTAGG	-92321609	True	NA	-24	True	AATAAA	-13	NA	92325350	92297489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92297887_92298256_92298337_92298883_92298955_92299889_92300017_92301550_92301823_92305752_92305831_92306885_92307025_92310170_92310262_92310552_92310676_92311145_92311260_92314266_92316139_92318617_92318687_92319220_92319357_92321667_92321747_92323440_92323504_92324022_92324210_92324905
transcript_142184.known	chr9	+	8293	8	FSM	ENSG00000188312.14	ENST00000375587.8	8293	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	10.7494660522355	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTGGGCCTCACACATC	92324897	True	NA	NA	False	AATAAA	-17	NA	92325952	92620529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762_92379860_92611313_92611394_92612522_92612615_92613018
transcript_142186.nnic	chr9	+	1138	6	NNC	ENSG00000188312.14	novel	570	5	NA	NA	-300	-29720	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	46.0807986041909	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTGTGTTCGCTTT	92325003	True	NA	NA	False	AATAAA	-23	NA	92325652	92350145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92347411_92347507_92349915
transcript_142196.known	chr9	+	570	5	FSM	ENSG00000188312.14	ENST00000618653.1	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	9.30053761886914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGTCTTTGAATTTAA	92324943	False	NA	NA	False	TTTAAA	-16	NA	92325998	92379865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92326106_92332169_92332352_92337540_92337630_92345698_92345788_92379762
transcript_142199.known	chr9	-	4268	13	FSM	ENSG00000127080.10	ENST00000287996.8	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	10.1280002413551	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTTCATCCTCCACGTT	-92667679	True	NA	NA	False	AATAAA	-21	NA	92670131	92613182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92616058_92619485_92619566_92634385_92634489_92635157_92635309_92638000_92638281_92640709_92640783_92642751_92642811_92648058_92648149_92649452_92649575_92652572_92652640_92656455_92656552_92658633_92658682_92669907
transcript_142200.known	chr9	-	2920	2	FSM	ENSG00000288062.1	ENST00000655112.1	2920	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGTTACAAAATAAAAATA	-92809158	False	NA	-50	True	NA	NA	NA	92809171	92805430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92808088_92808908
transcript_142206.nnic	chr9	+	1733	8	NNC	ENSG00000187984.13	novel	862	7	NA	NA	-590	-4320	at_least_one_novel_splicesite	TRUE	canonical	1	4	junction_7	6.53405521487387	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTCAGTGTACTTT	92808952	False	NA	13	True	NA	NA	NA	92808977	92834137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_92809871_92813595_92813711_92813873_92814048_92818317_92818425_92819241_92819380_92822209_92822278_92826524_92826579_92833953
transcript_142211.known	chr9	-	4031	6	FSM	ENSG00000127081.14	ENST00000395506.7	4031	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.2557236880984	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTAACATTTCTGGACAA	-92876225	True	NA	NA	False	ATTAAA	-16	NA	92878038	92845030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92862139_92862166_92875014_92875060_92877819
transcript_142213.known	chr9	-	4784	5	FSM	ENSG00000127081.14	ENST00000375495.8	4784	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.51314879522022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATGGTCTGGATAATAT	-92876225	True	NA	NA	False	ATTAAA	-14	NA	92878038	92844181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92875014_92875060_92877889
transcript_142215.nic	chr9	+	763	4	NIC	ENSG00000226668.5	novel	461	3	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTTCTGTAAT	92882459	True	NA	NA	False	AATAAA	-33	NA	92882492	92899608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_92882790_92883905_92884001_92884565_92884627_92899298
transcript_142216.known	chr9	-	3960	4	FSM	ENSG00000127081.14	ENST00000395505.6	3960	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.3781471969828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTAACATTTCTGGACAA	-92876225	True	NA	NA	False	ATTAAA	-16	NA	92878038	92845030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877819
transcript_142217.known	chr9	-	2836	4	FSM	ENSG00000127081.14	ENST00000332591.6	2836	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	11.0453610171873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCAGTCTTTCTTGTTTC	-92876209	True	NA	-31	True	AGTAAA	-16	NA	92878022	92846068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_92848552_92855810_92855904_92856191_92856319_92877889
transcript_142220.known	chr9	+	461	3	FSM	ENSG00000226668.5	ENST00000425090.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTGTTTCTGTAAT	92883894	False	NA	NA	False	AATAAA	-33	NA	92883910	92899608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_92884001_92884565_92884627_92899298
transcript_142228.known	chr9	+	1196	5	FSM	ENSG00000157303.11	ENST00000375472.8	1196	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	5.54526825320471	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACTACCTCAGCATCTT	93057890	True	NA	30	True	AATAAA	-39	NA	93058700	93085133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93079470_93079603_93084536
transcript_142229.known	chr9	+	1076	4	FSM	ENSG00000157303.11	ENST00000617293.4	1076	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	35.6931365951495	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTACCTCAGCATCT	93057877	True	NA	29	True	AATAAA	-38	NA	93058687	93085132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93058831_93075783_93075973_93077845_93077994_93084536
transcript_14223.known	chr1	+	794	9	FSM	ENSG00000203705.11	ENST00000526997.5	794	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	127.454832685936	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGAAGAATCTGAACTGAAG	212789642	True	NA	-88	True	AATAGA	-10	NA	212791905	212815225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319_212804430_212804595_212804652_212812250_212812329_212815012
transcript_142233.known	chr9	+	759	6	FSM	ENSG00000165233.18	ENST00000490488.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	66.6651333156996	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTTCTCTCAGCCTGCCTC	93095137	False	NA	14	True	ATTAAA	-6	NA	93096314	93113272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93096353_93107673_93107828_93110567_93110722_93111878_93111939_93112217_93112290_93112991
transcript_142238.known	chr9	+	660	5	FSM	ENSG00000165233.18	ENST00000468781.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	110.298175415553	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTATTTATAATTTGTGTAA	93095100	True	NA	27	True	NA	NA	NA	93096277	93113207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93096353_93107673_93107817_93110567_93110722_93112217_93112290_93112991
transcript_142239.nnic	chr9	+	694	5	NIC	ENSG00000165233.18	novel	857	6	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	117.163347511071	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTCGTTCCTCAGTC	93095059	True	NA	25	True	ATTAAA	-17	NA	93096236	93113283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_93096353_93107673_93107828_93111878_93111939_93112217_93112290_93112991
transcript_14224.known	chr1	+	1073	9	FSM	ENSG00000203705.11	ENST00000526641.5	1073	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	120.81798034647	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTTTATATAGAACCACC	212789606	True	NA	102	True	NA	NA	NA	212791869	212815415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_142241.known	chr9	-	861	5	FSM	ENSG00000131669.10	ENST00000461162.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.511748986844	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATGGGCTGGATGAGTG	-93129998	True	NA	NA	False	NA	NA	NA	93134219	93121896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93131484_93131542_93134142
transcript_142242.known	chr9	-	834	4	FSM	ENSG00000131669.10	ENST00000470314.5	834	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	179.150464383682	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTCTCCCTCTCCCAA	-93130017	True	NA	NA	False	NA	NA	NA	93134238	93121832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126586_93134142
transcript_142243.known	chr9	-	1237	4	FSM	ENSG00000131669.10	ENST00000375446.5	1237	4	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_3	16.6799946709291	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCATCTCCCTGTTCCC	-93130030	True	NA	-17	True	AATAAA	-25	NA	93134251	93121495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93122231_93124898_93125063_93126409_93126639_93134142
transcript_142247.nic	chr9	+	933	3	NIC	ENSG00000165238.17	novel	559	2	NA	NA	4734	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGGGCTGGAGTTTTGTT	93297854	False	NA	25	True	AGTAAA	-17	NA	93297866	93309195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_93298068_93308327_93308585_93308720
transcript_142252.nnic	chr9	-	1108	6	NNC	ENSG00000204352.4	novel	1154	5	NA	NA	-357	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	36.1684945774634	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	-93346714	False	209	-28	True	AATAAA	-17	NA	93346771	93318198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073_93346217_93346619
transcript_142254.known	chr9	-	1154	5	FSM	ENSG00000204352.4	ENST00000648864.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	36.9966214673719	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCAATTGCAAATGAAACCT	-93346357	False	NA	-28	True	AATAAA	-17	NA	93346414	93318198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93318550_93319100_93319175_93335373_93335661_93335875_93335977_93346073
transcript_14226.known	chr1	+	2206	9	FSM	ENSG00000203705.11	ENST00000525574.5	2206	9	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	133.718687923566	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATGAAATGATCTTCAA	212789662	True	NA	23	True	AATAAA	-19	NA	212791925	212816626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212802700_212802764_212804319_212804430_212804595_212804652_212807735_212807849_212812247_212812329_212815012
transcript_142261.known	chr9	-	467	3	FSM	ENSG00000204352.4	ENST00000649569.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGGTGCGTGGGTCGC	-93346095	False	NA	NA	False	NA	NA	NA	93346152	93335373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93335661_93335875_93335977_93346073
transcript_142264.known	chr9	+	5160	18	FSM	ENSG00000048828.17	ENST00000277165.11	5160	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	19.4527197198302	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTGGCTTTTAAAT	93450925	True	NA	22	True	AATAAA	-24	NA	93451684	93566112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93452390_93471140_93471388_93476255_93476339_93497470_93497600_93498789_93498887_93515666_93515768_93515982_93516270_93527154_93527243_93529352_93529581_93532154_93532330_93543221_93543472_93550576_93550692_93556381_93556592_93557826_93558011_93558580_93558719_93561108_93561251_93562207_93562305_93564228
transcript_142266.known	chr9	-	1491	4	FSM	ENSG00000188938.17	ENST00000476484.5	1491	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.406116896887	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGCGCTTCATAGGTTC	-93447829	True	NA	NA	False	NA	NA	NA	93451562	93446923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93448368_93448490_93450478_93450600_93451087
transcript_142267.nic	chr9	-	1825	4	NIC	ENSG00000188938.17	novel	1553	4	NA	NA	732	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	134.219554793215	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-93452091	False	NA	NA	False	AGTAAA	-25	NA	93452525	93446493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_93447698_93448368_93448490_93450478_93450600_93452146
transcript_142271.known	chr9	-	1735	3	FSM	ENSG00000188938.17	ENST00000523407.1	1735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAAACTATATTTTACAA	-93447791	True	NA	NA	False	NA	NA	NA	93451524	93446524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450474_93450600_93451087
transcript_142272.known	chr9	-	5922	3	FSM	ENSG00000188938.17	ENST00000375412.11	5922	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTGTAATTTAAAACATTA	-93453147	True	NA	-19	True	AATAAA	-16	NA	93453581	93443331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450478_93450600_93452146
transcript_142273.known	chr9	-	1432	3	FSM	ENSG00000188938.17	ENST00000483149.6	1432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGAGTTTTTATCTTTTA	-93452823	False	NA	NA	False	NA	NA	NA	93453257	93446904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450478_93450600_93452739
transcript_142274.known	chr9	-	1905	3	FSM	ENSG00000188938.17	ENST00000479094.5	1905	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGAGTTTTTTTTTTA	-93447791	True	NA	NA	False	AGTAAA	-25	NA	93451524	93446493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_93447698_93450478_93450600_93450944
transcript_142275.known	chr9	+	5392	22	FSM	ENSG00000197724.11	ENST00000359246.9	5392	22	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	6.96443833776595	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCTGTGTCATTTCTG	93576297	True	NA	17	True	AGTAAA	-24	NA	93576583	93679587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93576872_93629969_93630056_93636410_93636526_93645628_93645790_93649070_93649213_93653178_93653366_93654412_93654576_93655933_93656022_93656488_93656596_93658144_93658237_93659510_93659601_93660191_93660561_93662906_93663027_93663516_93663636_93665685_93665865_93665989_93666061_93667079_93667241_93673584_93673863_93674926_93675023_93675679_93675790_93676593_93676964_93677587
transcript_142278.known	chr9	+	1494	4	FSM	ENSG00000231990.2	ENST00000669339.1	1494	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.69967317119759	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGTGACCTTGCCACTT	NA	False	NA	NA	False	AATAAA	-27	NA	93808348	93858340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_93808565_93825710_93826516_93857007_93857251_93858110
transcript_142279.nnic	chr9	+	501	3	NNC	ENSG00000231990.2	novel	691	3	NA	NA	18856	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCCACAGCCCCAGTGA	93827195	False	NA	NA	False	AATAAA	-16	NA	93827212	93858329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_93827252_93857007_93857251_93858110
transcript_142280.nnic	chr9	+	500	3	NNC	ENSG00000235601.1	novel	307	3	NA	NA	-99	21514	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGCCCAGTTTGTGGTAGA	93955445	True	NA	NA	False	AATAAA	-19	NA	93955497	93980654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_93955641_93969692_93969814_93980418
transcript_142283.nnic	chr9	+	593	5	NNC	ENSG00000175787.17	novel	2716	4	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.82623792124926	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTGTGAATATAATG	94258773	True	NA	3	True	AATAAA	-19	NA	94259277	94295846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94295632
transcript_142286.known	chr9	+	2374	5	FSM	ENSG00000175787.17	ENST00000395395.7	2374	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	6.04152298679729	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATACAGTCACACTACACA	94258793	True	NA	NA	False	NA	NA	NA	94259297	94301829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94259346_94278757_94278846_94292340_94292468_94292973_94293070_94299814
transcript_142288.known	chr9	+	509	2	FSM	ENSG00000269929.4	ENST00000660581.1	509	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCCGGTTTCGGGTATTT	94165863	True	NA	NA	False	AATAAA	-17	NA	94166289	94200902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94166382_94200485
transcript_142289.known	chr9	+	2716	4	FSM	ENSG00000175787.17	ENST00000480716.1	2716	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.52447456836295	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTGTGAATATAATG	NA	False	NA	3	True	AATAAA	-19	NA	94278757	94295846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94278846_94292340_94292468_94292973_94293070_94293441
transcript_142291.known	chr9	-	1487	8	FSM	ENSG00000165140.12	ENST00000415431.5	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	10.0244598816279	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTCTCCCTTGCT	NA	False	NA	NA	False	AATAAA	-14	NA	94640249	94603140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140_94639335_94640043
transcript_142292.nnic	chr9	-	1534	8	NNC	ENSG00000165140.12	novel	1487	8	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	11.9215120257286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	94640261	94603132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140_94639362_94640043
transcript_142295.nic	chr9	-	1288	7	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	7.15697018452796	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	94640236	94603132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94640043
transcript_142299.nnic	chr9	-	1150	6	NIC	ENSG00000165140.12	novel	1487	8	NA	NA	13	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	13.311649033835	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	NA	False	NA	NA	False	AATAAA	-22	NA	94640236	94603132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_94603573_94605456_94605577_94609920_94610062_94617767_94617861_94620328_94620492_94640043
transcript_1423.known	chr1	-	2210	15	FSM	ENSG00000007923.17	ENST00000294401.11	2210	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	236.684798577245	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTTGGAAATTAGTCGT	NA	False	NA	NA	False	TATAAA	-24	NA	6701924	6635112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6635701_6636116_6636247_6637197_6637341_6637446_6637505_6638294_6638365_6644557_6644675_6645040_6645127_6645788_6645979_6651528_6651603_6652828_6652952_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_142303.known	chr9	+	1164	3	FSM	ENSG00000231806.4	ENST00000452148.3	1193	3	15	14	-14	-14	multi-exon	FALSE	canonical	3	14	junction_1	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAAATGTGTG	94553773	True	NA	NA	False	NA	NA	NA	94555068	94568127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94555311_94558968_94559153_94567389
transcript_142305.known	chr9	+	3974	3	FSM	ENSG00000231806.4	ENST00000644721.1	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	11	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTGTAAATCAAAAACTTAA	94553787	True	NA	NA	False	AATAAA	-3	NA	94555082	94570916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94555346_94558968_94559153_94567389
transcript_142307.nnic	chr9	+	1108	3	NNC	ENSG00000231806.4	novel	1193	3	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	1	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTACAGTTATTTTG	94553744	True	NA	NA	False	NA	NA	NA	94555039	94568141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_94555311_94558883_94558969_94567389
transcript_142313.nnic	chr9	+	1133	3	NNC	ENSG00000231806.4	novel	3974	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGTACAGTTATTTTG	94553754	True	NA	NA	False	NA	NA	NA	94555049	94568141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_94555346_94558883_94558969_94567389
transcript_142314.nnic	chr9	+	1329	3	NNC	ENSG00000231806.4	novel	3974	3	NA	NA	-4	196	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCATGTAGCCACTGTG	94553754	True	NA	10	True	AATAAA	-22	NA	94555049	94568337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_94555346_94558883_94558969_94567389
transcript_142317.known	chr9	-	1473	7	FSM	ENSG00000165140.12	ENST00000375326.9	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	5.05525029603437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCCTTGCTTTGTGTCA	-94639251	False	267	NA	False	AATAAA	-22	NA	94639518	94603132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_94603573_94605456_94605577_94606814_94606953_94609920_94610062_94617767_94617861_94620328_94620492_94639140
transcript_142318.known	chr9	+	2820	15	FSM	ENSG00000148120.18	ENST00000297979.9	2820	15	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_7	13.0899556445204	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	94725193	True	NA	14	True	AATAAA	-23	NA	94726711	95087159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_94726752_94759648_94760581_94773001_94773169_94792764_94792919_94800756_94801003_94955176_94955280_94955907_94956016_94967757_94967802_94979366_94979428_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_142322.nic	chr9	+	1080	7	NIC	ENSG00000148120.18	novel	919	6	NA	NA	255	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	12.5222025041746	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTTGCTTCTAAATT	95003983	True	NA	14	True	AATAAA	-23	NA	95004171	95087159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95082574_95082720_95086681
transcript_142325.nic	chr9	+	931	6	NIC	ENSG00000148120.18	novel	919	6	NA	NA	255	-4	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	13.9370011121475	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	95003983	True	NA	10	True	AATAAA	-19	NA	95004171	95087155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_95004287_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_142327.nnic	chr9	+	934	6	NNC	ENSG00000148120.18	novel	919	6	NA	NA	503	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	18.914544668059	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATACGTGTTTGCTTCTA	95004231	False	NA	10	True	AATAAA	-19	NA	95004419	95087155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_95004538_95005157_95005221_95005541_95005617_95060693_95060811_95080693_95080781_95086681
transcript_14233.known	chr1	+	498	6	FSM	ENSG00000203705.11	ENST00000488246.6	498	6	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_5	21.918029108476	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTCTACATTTATTTT	212789660	True	NA	5	True	ATTAAA	-24	NA	212791923	212804498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212797111_212797197_212802700_212802764_212804319
transcript_142336.nic	chr9	+	1268	3	ISM	ENSG00000148120.18	ENST00000277198.6	1966	8	-38	158585	-36	-7	5prime_fragment	FALSE	canonical	3	18	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAAGAGCTCCTTTATT	94725144	True	NA	NA	False	AATAAA	-16	NA	94726662	94773248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_94726752_94759648_94760581_94773001
transcript_142337.known	chr9	-	4592	15	FSM	ENSG00000158169.13	ENST00000289081.8	4592	15	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_14	6.37637540184909	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATCCATTAAATATT	-95317293	True	NA	0	True	AATAAA	-19	NA	95317709	95099053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95101851_95107065_95107270_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_142346.nnic	chr9	-	1631	3	NNC	ENSG00000158169.13	novel	1404	2	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTCTTT	-95426216	True	NA	-7	True	AATAAA	-19	NA	95426830	95414832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_95416165_95423100_95423293_95426723
transcript_142347.nnic	chr9	-	1329	2	NNC	ENSG00000158169.13	novel	652	7	NA	NA	-38	4374	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTGTTTTTGATTCAGT	-95426220	True	NA	2	True	TTTAAA	-21	NA	95426834	95410459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_95411678_95426723
transcript_142348.known	chr9	-	1404	2	FSM	ENSG00000158169.13	ENST00000433644.2	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAGTCTATGGTATTCTT	-95426182	True	NA	-8	True	AATAAA	-18	NA	95426796	95414833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95416165_95426723
transcript_142349.known	chr9	-	2387	14	FSM	ENSG00000158169.13	ENST00000490972.7	2387	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	11.1599452820444	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCACGTATGTATTTGA	-95317255	False	NA	NA	False	AATAAA	-18	NA	95317671	95110511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95111346_95111462_95111638_95114628_95114711_95117314_95117391_95125085_95125186_95126528_95126582_95135345_95135503_95149922_95150088_95171078_95171144_95172036_95172148_95240648_95240744_95247431_95247517_95249126_95249370_95317525
transcript_142355.known	chr9	-	290	3	FSM	ENSG00000175611.13	ENST00000448465.2	1225	3	935	0	9	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTGAGTCCTGGTGTTT	-95875033	False	NA	0	True	AATAAA	-22	NA	95875070	95870282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874508_95874549_95874979
transcript_142359.known	chr9	-	962	2	FSM	ENSG00000175611.13	ENST00000670189.2	1384	2	422	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTTAAAGAGTAATT	-95874795	True	NA	NA	False	AATAAA	-13	NA	95875587	95870087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874979
transcript_14236.known	chr1	+	492	5	FSM	ENSG00000203705.11	ENST00000530441.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	169.707100617505	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACATTTATTTTTCTCCA	212789587	True	NA	11	True	ATTAAA	-30	NA	212791850	212804504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212791988_212795094_212795128_212796516_212796591_212802700_212802764_212804319
transcript_142361.known	chr9	-	1148	2	FSM	ENSG00000175611.13	ENST00000671508.1	1148	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAATCATACTGCATAT	-95874669	True	NA	36	True	NA	NA	NA	95875461	95870246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874508
transcript_142363.known	chr9	-	1269	3	FSM	ENSG00000175611.13	ENST00000321517.3	1269	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCTGAGTCCTGGTGTT	-95875939	True	NA	-1	True	AATAAA	-21	NA	95875976	95870283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_95870442_95874508_95874623_95874979
transcript_142364.known	chr9	+	4564	14	FSM	ENSG00000182150.19	ENST00000288985.12	4564	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	10.2697349343253	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAAGTCTGCATTCTATA	95872703	True	NA	NA	False	AATAAA	-18	NA	95875700	95968840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_95876085_95880868_95881294_95897848_95897972_95907077_95907272_95915667_95915830_95916226_95916435_95921174_95921316_95922304_95922419_95923259_95923380_95928078_95928151_95928718_95928865_95941453_95941550_95955913_95956014_95966561
transcript_142366.known	chr9	+	2186	2	FSM	ENSG00000182150.19	ENST00000665077.3	2186	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCAAATAATGCTACTGT	95872710	True	NA	NA	False	AAAAAG	-16	NA	95875707	95882677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_95876085_95880868
transcript_142367.known	chr9	-	654	1	FSM	ENSG00000286835.1	ENST00000658405.1	654	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGTGTAATGAATGAAT	-96417285	False	1127	NA	False	AATAAA	-14	NA	96417377	96416723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96416700_96417400
transcript_142368.known	chr9	+	2651	8	FSM	ENSG00000130956.14	ENST00000375249.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_6	22.5352331848126	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTGTGTAGAGAAAACAGT	96448649	True	NA	4	True	AATAAA	-20	NA	96450168	96491336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96450629_96458378_96458542_96465336_96465499_96465709_96465779_96471010_96471095_96484461_96484634_96488088_96488275_96489981
transcript_142369.known	chr9	-	2899	6	FSM	ENSG00000158122.12	ENST00000375234.8	2899	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	6.34350061086148	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-96653829	True	NA	3	True	AATAAA	-21	NA	96655317	96639576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655089
transcript_142370.known	chr9	-	2723	6	FSM	ENSG00000158122.12	ENST00000446045.1	2723	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	18.8616012045637	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTTTGTGCTTTTTTTAT	-96653815	True	NA	3	True	AATAAA	-21	NA	96655303	96639576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96641887_96645892_96646025_96651389_96651496_96651658_96651713_96654704_96654774_96655251
transcript_142373.known	chr9	-	6507	6	FSM	ENSG00000081386.13	ENST00000223428.9	6507	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	11.1247471881387	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGTCTACACATTTAAT	-96777389	True	NA	3	True	AATAAA	-20	NA	96778087	96754552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96778033
transcript_142378.known	chr9	+	841	4	FSM	ENSG00000224848.3	ENST00000666834.2	897	4	54	2	17	0	multi-exon	FALSE	canonical	2	10	junction_1	3.85861230093008	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96773459
transcript_142380.known	chr9	+	774	3	FSM	ENSG00000224848.3	ENST00000656729.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686699	True	NA	2	True	AATAAA	-14	NA	96687054	96773977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687146_96720965_96721131_96773459
transcript_142383.nic	chr9	+	734	3	NIC	ENSG00000224848.3	novel	897	4	NA	NA	-4	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686663	True	NA	2	True	AATAAA	-14	NA	96687018	96773977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_96687108_96687197_96687325_96773459
transcript_142385.known	chr9	+	1299	3	FSM	ENSG00000224848.3	ENST00000661289.2	1301	3	2	0	2	0	multi-exon	FALSE	canonical	2	17	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGAAAAACTGTATTAATAA	96686694	True	NA	NA	False	AATAAA	-2	NA	96687049	96774318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687325_96720965_96721131_96773459
transcript_142388.known	chr9	+	766	2	FSM	ENSG00000224848.3	ENST00000653137.2	785	2	17	2	17	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCAGTCTGTGGTTCTTT	96686721	True	NA	2	True	AATAAA	-14	NA	96687076	96773977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687325_96773459
transcript_142389.known	chr9	+	957	3	FSM	ENSG00000224848.3	ENST00000655560.2	990	3	30	3	0	-3	multi-exon	FALSE	canonical	2	10	junction_1	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTAATTAATCCTCTG	96686700	True	NA	NA	False	AATAAA	-23	NA	96687055	96721743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687108_96687197_96687325_96720965
transcript_142390.known	chr9	+	653	4	FSM	ENSG00000224848.3	ENST00000656163.1	653	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.34846922834953	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGATTGTGTTCATTG	96686700	True	NA	NA	False	AATAAA	-17	NA	96687055	96722565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_96687108_96687197_96687325_96720965_96721131_96722256
transcript_142391.known	chr9	-	5616	6	FSM	ENSG00000081386.13	ENST00000375231.5	5616	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	14.8808601901906	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTTCCATTGATGTCATT	-96777358	True	NA	-7	True	AATAAA	-15	NA	96778056	96755864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96760478_96763117_96763214_96763505_96763633_96774787_96774847_96775999_96776246_96777581
transcript_142392.known	chr9	-	4442	6	FSM	ENSG00000196597.13	ENST00000481138.6	4442	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	7.54718490564528	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATACCACATTCCCT	NA	False	NA	NA	False	NA	NA	NA	96854514	96816268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_96819779_96827079_96827182_96844889_96845017_96851946_96852006_96852852_96853070_96854087
transcript_142396.known	chr9	-	4497	9	FSM	ENSG00000136943.12	ENST00000681927.1	4497	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	366.579779004516	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTCTTGTTCTGCAGTG	-97033143	True	NA	0	True	AGTAAA	-19	NA	97039142	97029676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038410_97038549_97039070
transcript_142400.known	chr9	-	1512	8	FSM	ENSG00000136943.12	ENST00000681737.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	290.418768719396	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033141	True	NA	NA	False	AATAAA	-19	NA	97039140	97032654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97038937
transcript_142402.known	chr9	-	1601	9	FSM	ENSG00000136943.12	ENST00000679661.1	1601	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	369.604666332826	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	NA	False	NA	NA	False	AATAAA	-19	NA	97047263	97032654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97037616_97037917_97038054_97039606_97039804_97047168
transcript_142404.known	chr9	-	1372	8	FSM	ENSG00000136943.12	ENST00000680221.1	1372	8	0	0	0	0	multi-exon	TRUE	canonical	1	29	junction_4	297.075747916251	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033140	True	NA	NA	False	AATAAA	-19	NA	97039139	97032654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036742_97037251_97037399_97037492_97037616_97037917_97038054_97039070
transcript_142405.known	chr9	-	2478	6	FSM	ENSG00000136943.12	ENST00000680435.1	2478	6	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	54.5475938974397	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTGAAATAAATTTTAAT	-97033140	True	NA	NA	False	AAAAAG	-12	NA	97039139	97032685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97036748_97037251_97037399_97037492_97038054_97039070
transcript_142406.known	chr9	-	1715	7	FSM	ENSG00000136943.12	ENST00000680159.1	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	815	junction_1	49.8029450267083	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGGCCTTTTTTTAATGC	-97033175	True	NA	NA	False	AATAAA	-19	NA	97039174	97032654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97033049_97034725_97034844_97035527_97035694_97036522_97036748_97037251_97037399_97037492_97038054_97039070
transcript_14242.nnic	chr1	-	954	4	Fusion	ENSG00000185523.6_ENSG00000198468.10	novel	506	3	NA	NA	0	-51	multi-exon	FALSE	canonical	1	1	junction_1	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCTAAATTATTTACA	-212856513	True	NA	NA	False	AATACA	-21	NA	212858138	212830191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_212830262_212831275_212831472_212835872_212836188_212857765
transcript_14243.nnic	chr1	-	758	3	Fusion	ENSG00000185523.6_ENSG00000198468.10	novel	506	3	NA	NA	0	-51	multi-exon	FALSE	canonical	0	0	junction_1	5.5	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGTCTAAATTATTTACA	-212856513	True	NA	NA	False	AATACA	-21	NA	212858138	212830191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_212830262_212835872_212836188_212857765
transcript_142459.nnic	chr9	+	949	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-144	5049	multi-exon	FALSE	canonical	3	186	junction_1	358	549	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	31	True	AATAAA	-22	NA	97214689	97219978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_97215114_97217233_97217364_97219583
transcript_142462.nnic	chr9	+	966	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-144	5049	multi-exon	FALSE	canonical	3	186	junction_1	120.5	669	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	31	True	AATAAA	-22	NA	97214689	97219978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_97215114_97217233_97217381_97219583
transcript_142467.nnic	chr9	+	1064	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-130	5049	multi-exon	FALSE	canonical	3	156	junction_1	373	687	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	31	True	AATAAA	-22	NA	97214703	97219978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_97215114_97217104_97217364_97219583
transcript_142469.nnic	chr9	+	1081	3	Genic_Genomic	ENSG00000289356.1	novel	96	1	NA	NA	-130	5049	multi-exon	FALSE	canonical	3	156	junction_1	135.5	1117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	31	True	AATAAA	-22	NA	97214703	97219978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr9_+_97215114_97217104_97217381_97219583
transcript_14248.known	chr1	-	2565	2	FSM	ENSG00000198468.10	ENST00000356684.8	2565	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTATTTTCTTTTTTTTAT	-212856500	True	NA	NA	False	CATAAA	-16	NA	212858125	212852104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212854310_212857765
transcript_142497.known	chr9	+	3688	17	FSM	ENSG00000196116.8	ENST00000355295.5	3688	17	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_8	4.06538359198735	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTACCTTTTAATTTC	97411791	True	NA	NA	False	AATAAA	-20	NA	97412095	97496125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97412239_97428459_97428673_97430932_97431075_97432024_97432239_97439244_97439319_97441657_97441876_97460177_97460765_97464841_97465029_97470557_97470670_97472292_97472496_97473491_97473627_97475382_97475470_97478438_97478574_97480827_97480939_97482848_97483352_97487171_97487333_97495662
transcript_142499.nnic	chr9	+	1215	3	NNC	ENSG00000136842.14	novel	3259	10	NA	NA	31126	-1093	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6.5	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCCTTGGAATTTTGAAA	97586519	True	NA	NA	False	AATAAA	-23	NA	97586560	97600161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_97587103_97591290_97591436_97599633
transcript_14250.known	chr1	-	633	2	FSM	ENSG00000198468.10	ENST00000424044.2	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	-212856458	True	NA	-26	True	AATAAA	-40	NA	212858083	212856603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212856919_212857765
transcript_142500.nic	chr9	-	344	2	ISM	ENSG00000136925.15	ENST00000375172.6	1503	10	-91	24701	-24	-16574	5prime_fragment	FALSE	canonical	3	105	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTCGTTTGCAAAGAAAAA	-97631251	True	NA	NA	False	AAAAAG	-4	NA	97633392	97627418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_97627613_97633242
transcript_142501.known	chr9	-	4116	10	FSM	ENSG00000136925.15	ENST00000341170.5	4116	10	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_8	9.42547113797711	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGAAGAGTGTGCCGTTT	-97631227	True	NA	-4	True	AATAAA	-25	NA	97633368	97600079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97602768_97604726_97604866_97605482_97605642_97606142_97606262_97610345_97610452_97611573_97611700_97617756_97617878_97625680_97625998_97627397_97627613_97633242
transcript_142502.known	chr9	-	500	3	FSM	ENSG00000136925.15	ENST00000484708.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTGCTTTGTTTGAGTGA	NA	False	NA	NA	False	AATAAA	-19	NA	97617852	97610844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97611123_97611573_97611700_97617756
transcript_142504.known	chr9	+	4983	23	FSM	ENSG00000136937.13	ENST00000375147.8	4983	23	0	0	0	0	multi-exon	TRUE	canonical	3	359	junction_4	44.5683614571504	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGTTTTCCTAATTTA	97633075	True	NA	5	True	AGTAAA	-1	NA	97633820	97673748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97633916_97640793_97640883_97641561_97641663_97643203_97643361_97645116_97645225_97645610_97645733_97647491_97647562_97648007_97648224_97650502_97650601_97651309_97651374_97653797_97653909_97654879_97654945_97655701_97655765_97656010_97656086_97658639_97658744_97660945_97661069_97662041_97662145_97662953_97663048_97664339_97664444_97666762_97666878_97668845_97668975_97669592_97669707_97671085
transcript_142507.known	chr9	+	300	2	FSM	ENSG00000136937.13	ENST00000491445.1	300	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAACATACTGTTTTC	97672695	False	NA	-3	True	AATAAA	-44	NA	97672710	97673740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97672782_97673511
transcript_142508.known	chr9	-	1584	7	FSM	ENSG00000136936.11	ENST00000462523.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.6958174002346	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696256	True	NA	1	True	AATAAA	-22	NA	97697293	97674908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97675588_97682199_97682431_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_14251.known	chr1	-	929	2	FSM	ENSG00000198468.10	ENST00000426161.7	942	2	13	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	0	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCGGTCTTCCTGGAA	-212856500	True	NA	-26	True	AATAAA	-40	NA	212858125	212856603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212857173_212857765
transcript_142512.known	chr9	-	1400	6	FSM	ENSG00000136936.11	ENST00000375128.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7.44580418759451	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696303	True	NA	1	True	AATAAA	-22	NA	97697340	97674908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697120
transcript_142513.nic	chr9	-	1371	6	NIC	ENSG00000136936.11	novel	1400	6	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	22.8157840101979	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTGTACTCTTG	-97696377	True	NA	1	True	AATAAA	-22	NA	97697414	97674908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697223
transcript_142516.nic	chr9	-	928	6	NIC	ENSG00000136936.11	novel	1400	6	NA	NA	-74	-285	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	22.8157840101979	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACATCTTCATAGATGAA	-97696377	True	NA	NA	False	AATAAA	-41	NA	97697414	97675351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97675588_97684922_97685041_97687095_97687262_97689533_97689640_97693648_97693760_97697223
transcript_14252.known	chr1	-	1814	2	FSM	ENSG00000198468.10	ENST00000651970.1	1814	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATGAATACTGAATTAC	-212856501	True	NA	NA	False	AATAAA	-16	NA	212858126	212855468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212856922_212857765
transcript_142523.nic	chr9	-	993	2	ISM	ENSG00000136936.11	ENST00000375128.5	1400	6	-64	18142	-64	-8090	5prime_fragment	FALSE	canonical	3	61	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTATTCCAGTCTTTAGT	-97696367	True	NA	NA	False	ATTAAA	-14	NA	97697404	97693050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_97693760_97697120
transcript_142529.known	chr9	-	1577	5	FSM	ENSG00000136932.15	ENST00000375119.8	1577	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	9.12071817347735	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	-97921979	True	NA	42	True	ATTAAA	-15	NA	97922500	97904488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_97904993_97909959_97910617_97913400_97913559_97916163_97916339_97922417
transcript_142531.nic	chr9	-	1461	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	10.8423039781937	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTCTCGATAATTTCTG	-97922038	True	NA	42	True	ATTAAA	-15	NA	97922559	97904488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
transcript_142533.nic	chr9	-	1398	4	NIC	ENSG00000136932.15	novel	1577	5	NA	NA	-59	-18	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	10.8423039781937	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAATACAGAGAAATCAC	-97922038	True	NA	-21	True	AATAAA	-15	NA	97922559	97904551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_97904993_97909959_97910617_97913400_97913559_97922417
transcript_142542.known	chr9	+	1483	7	FSM	ENSG00000136938.9	ENST00000339399.5	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_1	54.0986752764489	3241	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAGTTGTATGCTTACAT	97970670	True	NA	12	True	AATAAA	-19	NA	97983340	98015943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_97983610_97994630_97994781_97998555_97998679_98004963_98005154_98011270_98011390_98012420_98012473_98015363
transcript_142554.known	chr9	+	1179	6	FSM	ENSG00000095380.11	ENST00000210444.6	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	692	junction_3	93.4931013497788	4707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTTCCCTTGCTGAT	98045754	True	NA	20	True	AATAAA	-16	NA	98056731	98083077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_98056941_98060781_98060998_98076917_98077018_98078192_98078348_98080815_98081083_98082845
transcript_142562.known	chr9	+	649	2	FSM	ENSG00000095380.11	ENST00000480925.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	968	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGTCAGGAGTTCGAGAC	98045792	True	NA	NA	False	NA	NA	NA	98056769	98061259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_98056941_98060781
transcript_142563.known	chr9	-	5456	12	FSM	ENSG00000106789.13	ENST00000375077.5	5456	12	0	0	0	0	multi-exon	TRUE	canonical	3	326	junction_1	35.4922876036308	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCTTTCCTTTTCTTGAT	-98189409	True	NA	-4	True	AATAAA	-22	NA	98192637	98120974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98124906_98126548_98126824_98128169_98128261_98128606_98128720_98129793_98129891_98130954_98131060_98132184_98132302_98133037_98133218_98134805_98134956_98137571_98137689_98157459_98157661_98192558
transcript_142569.known	chr9	-	3174	13	FSM	ENSG00000095383.20	ENST00000375064.5	3174	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	13.0072095393286	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGCTTTGGAACTTAAACA	-98253919	True	NA	-16	True	TATAAA	-27	NA	98255580	98199028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98199585_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_142570.known	chr9	-	3265	13	FSM	ENSG00000095383.20	ENST00000465784.7	3265	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	6.57171971404746	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCTCAGTTACCAGTTG	-98253988	True	NA	2	True	TATAAA	-45	NA	98255649	98199010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98199589_98200252_98200375_98201478_98201665_98203287_98203409_98208667_98209145_98210655_98210844_98213107_98213219_98220832_98221229_98228951_98229149_98233415_98233550_98243993_98244130_98251784_98251927_98255172
transcript_142572.known	chr9	-	2586	15	FSM	ENSG00000165138.18	ENST00000375019.6	2586	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	153.893565790896	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATCTCCCTGGGTGAGGT	NA	False	NA	10	True	AATAAA	-36	NA	98796965	98731995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98732554_98736526_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98796683
transcript_142573.known	chr9	-	2272	9	FSM	ENSG00000165138.18	ENST00000444472.5	2272	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	103.931392634757	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTCCCACTTTGACTACA	-98777407	False	NA	-8	True	ATTAAA	-13	NA	98777426	98731328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98732554_98736495_98736624_98745558_98745676_98751028_98751097_98756419_98756607_98768080_98768251_98770895_98771047_98773876_98774081_98777404
transcript_142575.known	chr9	-	7190	15	FSM	ENSG00000165138.18	ENST00000353234.5	7190	15	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_4	121.434558675924	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCTTGCAGAAGGAATCT	-98792574	True	NA	-3	True	AATAAA	-23	NA	98796555	98732008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98736624_98745558_98745676_98751028_98751097_98756419_98756604_98768080_98768251_98770895_98771047_98773876_98774081_98777404_98777455_98778225_98778425_98780188_98780338_98782466_98782574_98783952_98784158_98784831_98784877_98790103_98790607_98796132
transcript_142579.known	chr9	-	1938	2	FSM	ENSG00000285706.1	ENST00000647710.1	1938	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATCATGGTGAATTGACT	-98807512	True	NA	NA	False	AATAAA	-7	NA	98807564	98798465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_98799610_98806770
transcript_14258.known	chr1	+	5919	10	FSM	ENSG00000162769.13	ENST00000366971.9	5919	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	81.047463612532	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGTGACTTTTTGAAA	212852361	True	NA	9	True	AATAAA	-19	NA	212858274	212899363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212859191_212863724_212863870_212872677_212872819_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_142580.known	chr9	+	2764	10	FSM	ENSG00000119514.7	ENST00000375011.4	2764	10	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	30.9435966370994	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCAGATCTTTTTGTACTG	98805503	True	NA	16	True	ATTAAA	-19	NA	98807669	98850081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_98808070_98823255_98823426_98826751_98826942_98831771_98831958_98835248_98835367_98836971_98837149_98840001_98840134_98844095_98844210_98845976_98846124_98848951
transcript_142592.known	chr9	+	587	4	FSM	ENSG00000106803.10	ENST00000498603.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	1534.41114293254	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	99222031	False	NA	21	True	AATAAA	-19	NA	99222063	99230615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99222172_99222545_99222644_99227898_99228001_99230336
transcript_142597.known	chr9	+	564	4	FSM	ENSG00000106803.10	ENST00000223641.5	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	3157	junction_2	98.6204846875131	47214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATCGTTGATGC	99181611	True	NA	21	True	AATAAA	-19	NA	99222281	99230615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99222367_99222545_99222644_99227898_99228001_99230336
transcript_142611.known	chr9	+	687	2	FSM	ENSG00000106803.10	ENST00000481573.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAAGCTCTTTCCTTTTCCC	99181644	True	NA	NA	False	TTTAAA	-21	NA	99222314	99223180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99222367_99222545
transcript_142615.known	chr9	-	1652	3	FSM	ENSG00000255145.3	ENST00000529965.3	1652	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	7	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTGCCCAGGTTGGAGT	-99906299	True	NA	NA	False	NA	NA	NA	99906601	99885217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_99886696_99894879_99895006_99906553
transcript_142620.known	chr9	+	6885	8	FSM	ENSG00000136874.11	ENST00000259400.11	6885	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	10.842094834863	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTAACTGAAGGCCTGTG	99905529	True	NA	5	True	AATAAA	-18	NA	99906653	99974534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99959916_99960033_99960104_99960156_99967652_99967740_99968433
transcript_142624.known	chr9	+	941	7	FSM	ENSG00000136874.11	ENST00000524405.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	21.2994522621279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGGAACACAAGTATATC	99905571	True	NA	NA	False	NA	NA	NA	99906695	99968748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059_99951286_99960104_99960156_99967652_99967740_99968433
transcript_142627.nic	chr9	+	730	4	ISM	ENSG00000136874.11	ENST00000524405.5	941	7	-45	17266	-3	298	5prime_fragment	FALSE	canonical	3	40	junction_1	13.0213499897497	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTATGGAGTGGGACTTC	99905526	True	NA	NA	False	AATAAA	-14	NA	99906650	99951482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_99906707_99915177_99915363_99928777_99928844_99951059
transcript_142635.known	chr9	-	4808	12	FSM	ENSG00000023318.9	ENST00000262455.7	4808	12	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_3	36.643468744824	1383	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAGTAAAAAAAAAAAA	-100090501	True	NA	NA	False	AATAAA	-21	NA	100099000	99979184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_99982714_99984966_99985070_100006505_100006648_100007577_100007690_100016321_100016439_100018255_100018314_100020615_100020732_100022041_100022227_100052416_100052533_100057819_100057860_100060099_100060173_100098783
transcript_14264.known	chr1	+	1108	9	FSM	ENSG00000162769.13	ENST00000419102.1	1108	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	143.409324574799	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATCCTTGGAGAGAGAT	212858904	False	NA	-60	True	NA	NA	NA	212858915	212895334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212859191_212863724_212863870_212883370_212883439_212885292_212885397_212887890_212888002_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_142655.nnic	chr9	+	1196	5	NNC	ENSG00000119509.13	novel	1654	4	NA	NA	-31	881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	21.9715725427198	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTGTGGCTGCAT	100098009	True	NA	NA	False	ATTAAA	-4	NA	100099211	100131784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675_100129745_100131159
transcript_142658.known	chr9	+	1654	4	FSM	ENSG00000119509.13	ENST00000374921.3	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	14.2361043360417	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAAGTGTTTTATAAAA	100098085	True	NA	NA	False	ATTAAA	-33	NA	100099287	100130903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100099417_100104497_100104628_100126382_100126550_100129675
transcript_142661.nic	chr9	+	605	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-76	4251	-31	-4251	5prime_fragment	FALSE	canonical	3	50	junction_1	2	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCATAGGTTTTATATA	100098009	True	NA	NA	False	AATAAA	-16	NA	100099211	100126652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_142662.nic	chr9	+	827	3	ISM	ENSG00000119509.13	ENST00000374921.3	1654	4	-76	4029	-31	-4029	5prime_fragment	FALSE	canonical	3	50	junction_1	2	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACTCAAAGATATTAATAGT	100098009	True	NA	NA	False	AATAAA	-14	NA	100099211	100126874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_100099417_100104497_100104628_100126382
transcript_142666.known	chr9	-	3077	15	FSM	ENSG00000136891.14	ENST00000374902.9	3077	15	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_12	52.3988335280666	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	-100339212	True	NA	-14	True	ATTAAA	-18	NA	100352942	100302083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100329139_100329276_100329930_100330170_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_142679.nnic	chr9	-	2795	13	NIC	ENSG00000136891.14	novel	3077	15	NA	NA	-93	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_8	185.209097298762	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGAACCTTCTTTCTT	NA	False	NA	-14	True	ATTAAA	-18	NA	100353035	100302083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_100302305_100303631_100303843_100308499_100308682_100310298_100310380_100320264_100320399_100321682_100321772_100326301_100326480_100327786_100327963_100340256_100340370_100346071_100346316_100346693_100347407_100349183_100349373_100352771
transcript_142694.known	chr9	+	786	4	FSM	ENSG00000066697.15	ENST00000374885.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	100.910301203043	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGTGCTTTAAAAAAGAT	100427225	False	NA	NA	False	AATAAA	-25	NA	100427276	100450705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100427394_100441905_100442357_100445168_100445238_100450556
transcript_142696.known	chr9	+	1880	3	FSM	ENSG00000066697.15	ENST00000395067.7	1880	3	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	30	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATAGTCACACTGTGTA	NA	False	NA	NA	False	ATTAAA	-21	NA	100427142	100451734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100427394_100441905_100442357_100450556
transcript_142698.known	chr9	+	710	3	FSM	ENSG00000066697.15	ENST00000374886.7	710	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	119.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTACAGGAGCAAAACCTC	100427138	False	NA	NA	False	AATAAA	-1	NA	100427436	100450681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100427571_100441905_100442357_100450556
transcript_14270.known	chr1	+	599	6	FSM	ENSG00000162769.13	ENST00000483790.1	599	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	175.595671928439	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACTTACTTGAAAATTA	212883388	True	NA	0	True	NA	NA	NA	212883408	212895394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212883439_212885292_212885397_212888488_212888595_212889145_212889258_212894985_212895054_212895215
transcript_142700.known	chr9	+	1755	3	FSM	ENSG00000066697.15	ENST00000613183.1	1755	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	124.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGACTTG	100429337	False	NA	NA	False	AAGAAA	-42	NA	100429513	100451711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_100429663_100441905_100442357_100450556
transcript_142701.known	chr9	+	2477	8	FSM	ENSG00000148123.15	ENST00000374874.8	2477	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.10365156891435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTCATGTCTTTTGT	NA	False	NA	17	True	AAAAAG	-16	NA	101028726	101325135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101029103_101185449_101185558_101269879_101270069_101286103_101286237_101309210_101309462_101312797_101312975_101317364_101317497_101324024
transcript_142703.nnic	chr9	+	1047	5	NNC	ENSG00000148123.15	novel	2477	8	NA	NA	-30	2678	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.59807621135332	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATCTTGTTTTGCAAT	NA	False	NA	NA	False	ATTAAA	-13	NA	101028696	101288838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_101029103_101185449_101185558_101269879_101270069_101286103_101286237_101288627
transcript_142704.known	chr9	-	3336	2	FSM	ENSG00000136897.8	ENST00000374865.5	3336	2	0	0	0	0	multi-exon	FALSE	canonical	3	1170	junction_1	0	477	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAACGTGTCATTTTTCTGA	-101388607	True	NA	-10	True	AATAAA	-16	NA	101398618	101387632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_101390851_101398500
transcript_142706.known	chr9	+	3134	3	FSM	ENSG00000136870.11	ENST00000374861.7	3134	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTTGTTACTTTAG	101398198	True	NA	22	True	ATTAAA	-23	NA	101398872	101410660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101399190_101399925_101400011_101407928
transcript_142707.known	chr9	+	3192	3	FSM	ENSG00000136870.11	ENST00000339664.7	3192	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTGTGTAAGAGTTGTTA	101398176	True	NA	16	True	ATTAAA	-17	NA	101398850	101410654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101399190_101399883_101400011_101407928
transcript_142709.known	chr9	-	4225	2	FSM	ENSG00000165152.9	ENST00000374848.8	4225	2	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGAGAAGACTTTTATC	-101484301	True	NA	-17	True	AATAAA	-21	NA	101487173	101473169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_101477170_101486948
transcript_142712.known	chr9	+	476	1	FSM	ENSG00000225376.6	ENST00000666720.1	476	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGTTGTCCTATCTTTG	NA	False	NA	NA	False	AATAAA	-26	NA	101468348	101468824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101468300_101468800
transcript_142713.known	chr9	+	3938	20	FSM	ENSG00000155827.12	ENST00000389120.8	3938	20	0	0	0	0	multi-exon	FALSE	canonical	1	48	junction_4	41.3653407183161	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTATGGTTTTTCT	101529298	True	NA	28	True	ATTAAA	-18	NA	101533852	101563344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_101533915_101535397_101535553_101540202_101540371_101540489_101540638_101540792_101540976_101544766_101544886_101546819_101546967_101547136_101547215_101547398_101547519_101550605_101550786_101551683_101551820_101552140_101552263_101552382_101552754_101553987_101554106_101554693_101554844_101557383_101557597_101560800_101560927_101561089_101561231_101561909_101562012_101562245
transcript_142719.known	chr9	+	5928	25	FSM	ENSG00000136824.19	ENST00000374793.8	5928	25	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	44.3886716028613	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTATGAGCAGTATGTAC	104090575	True	NA	9	True	AATAAA	-14	NA	104094308	104141419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104094478_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_142721.known	chr9	+	4266	25	FSM	ENSG00000136824.19	ENST00000374787.7	4266	25	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	53.3648344469985	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGATCATCAGTGTTTAA	104093810	True	NA	9	True	ATTAAA	-16	NA	104094563	104139651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104094839_104095323_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_142747.known	chr9	+	5992	25	FSM	ENSG00000136824.19	ENST00000286398.11	5992	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.9072054421577	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAATACCTGTATGAG	104094227	False	NA	-1	True	AATAAA	-4	NA	104094259	104141409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104094478_104095298_104095553_104096147_104096298_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959_104102194_104102423_104102574_104111580_104111815_104113315_104113476_104113963_104114082_104114690_104114830_104116199_104116320_104118170_104118376_104120026_104120163_104123107_104123233_104124911_104125106_104126640_104126785_104127285_104127481_104129644_104129846_104132008_104132126_104134414_104134576_104138017_104138166_104139138
transcript_142754.known	chr9	+	705	6	FSM	ENSG00000136824.19	ENST00000440179.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.068139576521	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGAACATATGTATAAGA	104090562	True	NA	NA	False	AATAGA	-26	NA	104094295	104102193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104094449_104098445_104098569_104099643_104099683_104100092_104100204_104100388_104100434_104101959
transcript_142758.known	chr9	+	1636	6	FSM	ENSG00000136783.10	ENST00000374767.5	1636	6	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	14.7512711316686	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGTTCTTTTTGTTGA	104746608	True	NA	5	True	AATAAA	-14	NA	104747682	104760120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084_104759172_104759261
transcript_14276.nnic	chr1	+	1397	4	NNC	ENSG00000282718.1	novel	554	3	NA	NA	217	2811	intron_retention	FALSE	canonical	3	25	junction_3	15.5134350376268	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGCTTTCTCATGTTTA	212916969	True	NA	12	True	AATAAA	-19	NA	212917003	212920388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212917201_212917359_212917705_212918335_212918387_212919584
transcript_142760.nic	chr9	+	1209	5	ISM	ENSG00000136783.10	ENST00000374767.5	1636	6	-21	538	-21	452	intron_retention	FALSE	canonical	3	99	junction_3	11.5839328382031	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTGACTCTTCATTTGT	104746587	True	NA	5	True	ATTAAA	-21	NA	104747661	104759582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084
transcript_142762.nic	chr9	+	1746	5	ISM	ENSG00000136783.10	ENST00000374767.5	1636	6	-21	1	-21	-1	intron_retention	FALSE	canonical	3	99	junction_3	11.5839328382031	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTGGTTCTTTTTGTTG	104746587	True	NA	4	True	AATAAA	-13	NA	104747661	104760119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_104747853_104750955_104751167_104752905_104753065_104754550_104754701_104759084
transcript_142766.known	chr9	+	5547	6	FSM	ENSG00000165028.12	ENST00000374762.4	5547	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	2.13541565040626	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTTGTCCTGTTTTCTGT	104764098	True	NA	2	True	AATAAA	-15	NA	104764128	104777764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_104764301_104766324_104766536_104768862_104769022_104770848_104770999_104772821_104772909_104772996
transcript_142769.nic	chr9	+	1124	3	ISM	ENSG00000165028.12	ENST00000460936.5	1111	6	-161	7987	-133	-3676	5prime_fragment	FALSE	canonical	1	2	junction_1	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAATTAGAGTTCTAGAG	104763982	True	NA	NA	False	NA	NA	NA	104763995	104769470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_104764301_104766324_104766536_104768862
transcript_142774.nnic	chr9	-	1225	3	NNC	ENSG00000286536.1	novel	2813	8	NA	NA	-5987	-172449	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	61	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTAGTTAGTTCCCAAC	-105245162	False	NA	NA	False	NA	NA	NA	105245208	105198380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_105199359_105226596_105226654_105245018
transcript_142778.known	chr9	+	1836	4	FSM	ENSG00000106701.13	ENST00000469022.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0.471404520791032	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGCACTATATCACTT	105447449	True	NA	NA	False	AAAACA	-6	NA	105448044	105473320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105448236_105464235_105464332_105468192_105468325_105471903
transcript_14278.nnic	chr1	+	1710	3	NNC	ENSG00000282718.1	novel	554	3	NA	NA	230	1939	intron_retention	FALSE	canonical	3	51	junction_1	5.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCTAAGCAAAAGAGTG	212916982	True	NA	NA	False	AATAAA	-39	NA	212917016	212919516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212917201_212917359_212917705_212918335
transcript_142782.known	chr9	+	4284	11	FSM	ENSG00000106692.15	ENST00000675668.1	4284	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	15.0947010569935	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATAATTACCATGCTGC	105556704	True	NA	NA	False	NA	NA	NA	105558130	105622823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105558166_105573654_105573747_105574197_105574333_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933
transcript_142783.known	chr9	+	7455	11	FSM	ENSG00000106692.15	ENST00000357998.10	7455	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.677546534668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATCTTGTATTTATTTTT	105556704	True	NA	4	True	AATAAA	-19	NA	105558130	105641118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105558166_105573654_105573747_105574944_105575138_105596597_105596658_105601144_105601349_105604214_105604493_105607818_105607952_105615277_105615408_105617958_105618093_105619933_105620062_105635050
transcript_142787.known	chr9	+	668	1	FSM	ENSG00000186051.7	ENST00000334077.6	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTGTTTATACTCAATGT	105662431	False	NA	NA	False	AATAAA	-20	NA	105662456	105663124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105662500_105663100
transcript_142796.nic	chr9	+	1014	6	NIC	ENSG00000095209.12	novel	3545	6	NA	NA	-22	5	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	120.371757484885	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGTTTAAGGGACTCACAT	105691303	True	NA	NA	False	AATAAA	-36	NA	105694518	105749287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105749075
transcript_142797.known	chr9	+	3545	6	FSM	ENSG00000095209.12	ENST00000374692.8	3545	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_5	31.230754073509	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCCTTGGTAATATTCATT	105691325	True	NA	NA	False	AATAAA	-34	NA	105694540	105776629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_105694773_105705596_105705754_105721536_105721722_105722533_105722622_105748072_105748191_105773864
transcript_14280.nic	chr1	+	793	2	NIC	ENSG00000282718.1	novel	554	3	NA	NA	-213	-52	intron_retention	FALSE	canonical	3	51	junction_1	0	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTCTTTTTTCTTTTTTT	212916562	True	NA	7	True	TATAAA	-22	NA	212916573	212917525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_212917201_212917359
transcript_14281.known	chr1	+	4224	9	FSM	ENSG00000143494.16	ENST00000366968.8	4224	9	0	0	0	0	multi-exon	FALSE	canonical	3	747	junction_2	285.968966847803	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTGTTTTTCTTCTAAAT	212922138	True	NA	17	True	AATAAA	-19	NA	212950593	212991585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212950741_212951338_212951393_212951588_212951819_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_142819.known	chr9	+	10345	13	FSM	ENSG00000148143.13	ENST00000277225.10	10345	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	7.40635987963498	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGTGCATCTGTTGTAA	106862014	True	NA	9	True	AATAAA	-19	NA	106863165	107013634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_106863356_106923353_106923604_106924132_106929760_106930524_106930690_106932445_106932550_106935502_106935622_106938915_106939108_106972004_106972273_106974136_106974274_106984185_106984410_107003293_107003427_107009544_107009669_107010822
transcript_142820.known	chr9	+	4114	10	FSM	ENSG00000119318.13	ENST00000358015.8	4114	10	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	12.0287720913105	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAACATTGCACTTCTCAT	107249376	True	NA	12	True	TATAAA	-15	NA	107283278	107332189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_107283696_107300140_107300223_107302034_107302115_107306378_107306648_107311681_107311738_107318751_107318880_107321982_107322119_107323889_107324018_107324833_107325005_107329542
transcript_142825.known	chr9	-	2393	3	FSM	ENSG00000136826.15	ENST00000497048.5	2393	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTTTTATTGTTTTG	-107488431	False	NA	NA	False	AATAAA	-21	NA	107488447	107484851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_107485927_107487027_107487193_107487294
transcript_142826.known	chr9	+	318	1	FSM	ENSG00000169253.3	ENST00000306634.3	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	335	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTTCCCCTGCCCTCT	108626810	False	NA	NA	False	AAGAAA	-7	NA	108626832	108627150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108626800_108627200
transcript_142834.known	chr9	-	2522	19	FSM	ENSG00000119326.15	ENST00000374595.8	2522	19	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_1	148.401659253311	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTAGTGTGATTTTTAAAA	-109005391	True	NA	0	True	AATAAA	-26	NA	109013522	108942568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_108942872_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_142838.known	chr9	-	2454	19	FSM	ENSG00000119326.15	ENST00000325551.9	2454	19	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_11	66.3156499787099	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCTAATTGTAGTGTGAT	-109005368	True	NA	-8	True	AATAAA	-18	NA	109013499	108942576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_108942835_108942960_108943045_108943702_108943817_108943961_108944019_108948185_108948235_108952208_108952364_108952443_108952495_108955789_108955828_108965377_108965529_108970401_108970495_108972674_108972834_108976961_108977049_108979280_108979482_108983144_108983316_108984346_108984437_108990725_108990846_108992631_108992820_108999066_108999257_109013301
transcript_14284.known	chr1	+	1206	7	FSM	ENSG00000143494.16	ENST00000366967.6	1206	7	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	391.438657036096	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGAACTTTTG	212922211	False	NA	NA	False	AGTAAA	-10	NA	212950666	212988924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_212950741_212961165_212961255_212965721_212965779_212966270_212966346_212972579_212972962_212973954_212974071_212988511
transcript_142856.known	chr9	+	1901	6	FSM	ENSG00000119328.12	ENST00000322940.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	10.0677703589226	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	108934366	False	NA	NA	False	AATAAA	-19	NA	108934399	108940954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108939195_108939273_108939384_108939455_108939548
transcript_142858.nnic	chr9	+	1759	5	NIC	ENSG00000119328.12	novel	1901	6	NA	NA	12	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	67.1355904122396	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATCATTCGATGTATTAA	108933520	True	NA	NA	False	AATAAA	-19	NA	108934411	108940954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_108934566_108935637_108935690_108939195_108939273_108939384_108939455_108939548
transcript_142860.known	chr9	+	499	4	FSM	ENSG00000119328.12	ENST00000374624.7	499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.3275859933281	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCCTTTTTCTCTT	108933595	True	NA	NA	False	AATAAA	-19	NA	108934486	108950744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_108934566_108935637_108935690_108936307_108936438_108950506
transcript_142863.known	chr9	-	671	4	FSM	ENSG00000260230.5	ENST00000644747.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGCCAACAGATTACATG	-109166940	False	NA	NA	False	NA	NA	NA	109167003	109137445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_109137628_109141342_109141590_109147050_109147190_109166900
transcript_142868.known	chr9	+	6866	4	FSM	ENSG00000157654.19	ENST00000374525.5	6866	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	3.85861230093008	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTGCTTGTTTGACC	110044499	True	NA	14	True	ATTAAA	-28	NA	110048695	110172512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_110048856_110136126_110138540_110156318_110156498_110168398
transcript_142870.known	chr9	+	572	3	FSM	ENSG00000157654.19	ENST00000495980.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATATACAATGATGAAAATG	110044501	True	NA	NA	False	ATTAAA	-43	NA	110048697	110168633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_110048856_110156318_110156498_110168398
transcript_142878.known	chr9	-	737	5	FSM	ENSG00000136810.13	ENST00000374517.6	737	5	0	0	0	0	multi-exon	FALSE	canonical	3	7766	junction_4	217.071992666028	17693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTTTGACAGAGAAAATAG	-110208292	True	NA	NA	False	AATAAA	-22	NA	110256507	110243809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_110244220_110244777_110244844_110250819_110250880_110251357_110251463_110256411
transcript_142880.nic	chr9	-	3530	30	ISM	ENSG00000136813.15	ENST00000338205.9	7078	49	72264	1194	-40305	0	3prime_fragment	FALSE	canonical	3	436	junction_27	83.3308663923398	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTCCTTATTAGCTTT	-111412051	False	42	-14	True	AATAAA	-17	NA	111412093	111361885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_111362170_111363587_111363660_111366238_111366328_111366521_111366628_111369034_111369174_111370434_111370628_111370721_111370766_111371620_111371830_111372428_111372621_111373169_111373237_111373314_111373407_111373971_111374039_111375112_111375203_111376475_111376542_111378579_111378731_111383210_111383333_111384521_111384570_111385336_111385443_111386376_111386457_111389555_111389724_111389983_111390102_111391755_111391825_111392767_111392883_111393679_111393735_111394159_111394306_111397029_111397154_111408570_111408673_111410040_111410214_111410979_111411143_111412013
transcript_142886.nic	chr9	-	587	2	ISM	ENSG00000136813.15	ENST00000602447.5	2806	23	109	42465	109	-8725	5prime_fragment	FALSE	canonical	3	73	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAGCAAAATAATTTTAT	-111483511	False	10215	NA	False	AATAAA	-7	NA	111483570	111451035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_111451556_111483503
transcript_142888.known	chr9	-	1941	11	FSM	ENSG00000106853.20	ENST00000466771.6	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	159.076836780218	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGCCGGGCGTGGTGGCT	NA	False	NA	NA	False	AATAAA	-24	NA	111599893	111562576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111563232_111564156_111564263_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_142893.known	chr9	-	1599	10	FSM	ENSG00000106853.20	ENST00000407693.7	1599	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	103.618960083997	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCTCATGCCTGTA	-111598882	True	NA	NA	False	AATAAA	-34	NA	111599647	111562566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599602
transcript_142900.known	chr9	+	1239	6	FSM	ENSG00000173258.13	ENST00000355824.7	1239	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	21.7494827524702	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAGAAT	111514287	True	NA	NA	False	NA	NA	NA	111525188	111539761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111539445
transcript_142902.known	chr9	+	14694	6	FSM	ENSG00000173258.13	ENST00000309235.6	14694	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	11.9398492452794	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGGCCGTTGTGCTATTT	111514277	True	NA	NA	False	NA	NA	NA	111525178	111555417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111541656
transcript_142903.known	chr9	+	2433	6	FSM	ENSG00000173258.13	ENST00000358151.8	2433	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	20.6106768447812	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAACAAAAAAAAGGAAT	111514257	True	NA	NA	False	NA	NA	NA	111525158	111577844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267_111527808_111530874_111530964_111533738_111533866_111534260_111534354_111576364
transcript_142913.known	chr9	-	1061	4	FSM	ENSG00000106853.20	ENST00000374313.5	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	167.572869721404	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACACAGTCTTTCCAT	-111599764	False	NA	NA	False	AATATA	-37	NA	111599816	111592297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111592983_111594221_111594268_111597316_111597433_111599602
transcript_142921.known	chr9	+	800	2	FSM	ENSG00000173258.13	ENST00000374374.3	800	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTTGTAGTTTTCTTG	111514314	True	NA	NA	False	AAAAAG	-9	NA	111525215	111528020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111525263_111527267
transcript_142923.known	chr9	-	1223	10	FSM	ENSG00000106853.20	ENST00000309195.9	1223	10	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	45.9720795566769	2327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGATGGAGGATGGAAG	-111596475	True	NA	-36	True	AATAAA	-22	NA	111599407	111562966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_111563232_111570090_111570210_111574733_111574843_111578795_111578952_111583471_111583590_111585997_111586166_111592925_111592983_111594221_111594268_111597316_111597433_111599338
transcript_142924.nnic	chr9	-	715	2	NNC	ENSG00000204173.11	novel	1103	3	NA	NA	63	-17907	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTGTGTGGTACTTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	111631226	111626920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_111627449_111631039
transcript_142933.known	chr9	+	1201	3	FSM	ENSG00000242616.4	ENST00000374293.5	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	110.5	6382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTTTCTATGACAGCAA	111654709	True	NA	15	True	AATAAA	-17	NA	111661604	111670226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111661716_111666814_111666947_111669268
transcript_142934.known	chr9	+	3959	9	FSM	ENSG00000148154.10	ENST00000374279.4	3959	9	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_4	28.1044369272896	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTAGCAATAGTGTATTTT	111894601	True	NA	9	True	AATAAA	-20	NA	111896813	111935369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_111897314_111914604_111914747_111922848_111922952_111924776_111924879_111926383_111926497_111929499_111929679_111931270_111931358_111932169_111932360_111932826
transcript_142936.known	chr9	-	7192	14	FSM	ENSG00000119314.16	ENST00000374257.6	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_12	46.9637906597848	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTCTGTGTTCTTGTCTG	-112319790	True	NA	-3	True	AATAAA	-28	NA	112333619	112218434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112275843_112276014_112297831_112297917_112333469
transcript_142937.known	chr9	-	2755	13	FSM	ENSG00000119314.16	ENST00000343327.6	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_11	64.2527020616427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGGTTTTCAATAAGTAA	-112319749	True	NA	NA	False	TTTAAA	-21	NA	112333578	112222660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112223984_112224132_112224211_112227410_112227628_112228379_112228473_112231379_112231414_112232098_112232239_112234819_112234898_112250928_112251104_112252677_112252789_112262434_112262600_112268048_112268196_112297831_112297917_112333469
transcript_142938.nic	chr9	-	1125	3	ISM	ENSG00000119314.16	ENST00000374257.6	7192	14	-12	56701	-6	774	5prime_fragment	FALSE	canonical	3	123	junction_1	69.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTATAGTATTGTCAAAAG	-112319802	True	NA	NA	False	AATAAA	-1	NA	112333631	112275135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_112276014_112297831_112297917_112333469
transcript_142939.known	chr9	+	11795	4	FSM	ENSG00000165185.15	ENST00000337530.11	11795	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	17.5562587763516	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTTTTCTTAGCTTA	112485581	True	NA	14	True	AATAAA	-16	NA	112486826	112669397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_112487119_112574056_112575252_112645649_112645823_112659262
transcript_14294.nnic	chr1	+	627	4	NNC	ENSG00000143494.16	novel	4224	9	NA	NA	15	474	at_least_one_novel_splicesite	FALSE	canonical	3	373	junction_3	555.950237581266	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGACTTCTCAGTGTGAA	212922100	True	NA	-11	True	AATGAA	-15	NA	212950555	212952286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_212950741_212951338_212951393_212951588_212951819_212952128
transcript_142940.known	chr9	+	3174	11	FSM	ENSG00000119471.15	ENST00000398805.8	3174	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	11.1986606342009	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378968	True	NA	12	True	AATAAA	-18	NA	112380107	112472405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112408906_112409022_112416840_112416945_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_142950.known	chr9	+	2983	9	FSM	ENSG00000119471.15	ENST00000398803.1	2983	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	34.0330721504833	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAATTTGTTGAGATTTTA	112378940	True	NA	12	True	AATAAA	-18	NA	112380079	112472405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_112380181_112403994_112404159_112405623_112405723_112418859_112418959_112438430_112438626_112441698_112441771_112454012_112454163_112459448_112459578_112470431
transcript_142956.nic	chr9	+	438	3	ISM	ENSG00000119471.15	ENST00000398803.1	2983	9	-9	66618	-9	-35983	5prime_fragment	FALSE	canonical	3	103	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAAATTTGTTTTGAGT	112378931	True	NA	NA	False	AATAAA	-20	NA	112380070	112405787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_112380181_112403994_112404159_112405623
transcript_142957.known	chr9	-	863	2	FSM	ENSG00000230185.6	ENST00000463223.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATTTGACCTATATGA	-112486641	False	NA	NA	False	AATAAA	-25	NA	112486651	112484960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112485562_112486389
transcript_142973.known	chr9	-	964	6	FSM	ENSG00000148153.14	ENST00000497712.6	964	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	91.7941174585823	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTATCAGTATACCTTTTG	-112716931	True	NA	30	True	NA	NA	NA	112718089	112687096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112701831_112701881_112716460_112716542_112717986
transcript_142979.known	chr9	-	4114	5	FSM	ENSG00000148153.14	ENST00000374242.9	4114	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	13.8021737418423	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTTCCTGAACAAT	-112716959	True	NA	0	True	AATAAA	-31	NA	112718117	112683925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112716460_112716542_112717986
transcript_142983.known	chr9	-	879	5	FSM	ENSG00000148153.14	ENST00000481146.6	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	70.104832215761	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCAATTGCATCCATATT	-112716928	True	NA	-5	True	AAGAAA	-35	NA	112718086	112687131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112694130_112694234_112701787_112701881_112716460_112716542_112717986
transcript_142986.known	chr9	-	874	4	FSM	ENSG00000148153.14	ENST00000374236.5	874	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	84.581321815162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTGCTGTTTATAGGAT	-112716991	True	NA	10	True	AATGAA	-27	NA	112718149	112687116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112689526_112689618_112694130_112694234_112717986
transcript_142990.nic	chr9	-	1014	4	NIC	ENSG00000148153.14	novel	4114	5	NA	NA	0	130	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	69.0909223817106	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTTTTATAAACATATG	-112716991	True	NA	-79	True	AATAAA	-18	NA	112718149	112686966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_112687634_112694130_112694234_112716460_112716542_112717986
transcript_142993.known	chr9	-	713	3	FSM	ENSG00000148153.14	ENST00000374234.1	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAATAGGCTTAAATCAA	-112716949	True	NA	-18	True	AAGAAA	-22	NA	112718107	112687144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112687634_112694130_112694234_112717986
transcript_142995.nnic	chr9	-	547	3	NNC	ENSG00000148153.14	novel	4114	5	NA	NA	0	-16675	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	86.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTGGTGTAGAGAACAAT	-112716991	True	NA	NA	False	AATAAA	-17	NA	112718149	112710708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_112711012_112716460_112716542_112717986
transcript_142996.known	chr9	-	1664	1	FSM	ENSG00000226609.2	ENST00000671283.1	1664	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTACTATTCTGAGT	-112750535	True	NA	NA	False	AATAAA	-18	NA	112750565	112748901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112748900_112750600
transcript_142998.nnic	chr9	+	957	2	NNC	ENSG00000148158.17	novel	7700	9	NA	NA	-34939	-61313	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	159	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGCTTATTTTTTTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	112803645	112805212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_112804166_112804775
transcript_143003.known	chr9	-	2414	5	FSM	ENSG00000228623.7	ENST00000638622.1	2414	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	38.0090449761632	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGGGAAAGCCTGCA	-113008633	True	NA	84	True	NA	NA	NA	113012227	112997119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112999139_112999664_112999815_113001993_113002074_113011140_113011228_113012149
transcript_143009.nic	chr9	-	439	4	FSM	ENSG00000228623.7	ENST00000685276.1	407	4	-37	5	-37	-5	multi-exon	FALSE	canonical	3	172	junction_3	19.131126469709	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAAGTGTTTTCCTGAGTT	-113008673	True	NA	-16	True	AATAAA	-14	NA	113012267	112999660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_112999815_113001993_113002074_113011140_113011228_113012149
transcript_143011.known	chr9	-	6277	4	FSM	ENSG00000136866.14	ENST00000374227.8	6277	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	2.62466929133727	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCACATTAGGATTTTAA	-113055546	True	NA	NA	False	AATAAA	-19	NA	113056724	113038376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049873_113056556
transcript_143012.known	chr9	-	2451	4	FSM	ENSG00000136866.14	ENST00000555206.5	2451	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.59966329107444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCTTTTTAAAAGGGTT	-113055581	True	NA	NA	False	NA	NA	NA	113056759	113042240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113044269_113049361_113049497_113049790_113049876_113056556
transcript_143021.known	chr9	+	1723	4	FSM	ENSG00000136867.11	ENST00000259392.8	1723	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.08248290463863	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACTGTTCTGTTCTCCT	113150805	True	NA	18	True	ATTAAA	-44	NA	113151006	113164140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113151081_113157726_113157794_113161508_113161699_113162748
transcript_143023.nnic	chr9	+	1192	4	NNC	ENSG00000136867.11	novel	1750	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.4721912892465	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATGACTGTTCTGTTCT	113150747	True	NA	15	True	ATTAAA	-41	NA	113150948	113164137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_113151081_113157726_113157794_113161508_113161699_113163334
transcript_143024.nic	chr9	-	677	4	FSM	ENSG00000119321.10	ENST00000493847.2	2983	4	-88	2394	7	623	multi-exon	FALSE	canonical	3	39	junction_1	2.62466929133727	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAAATTTGACCTTTGT	-113220239	True	NA	NA	False	AAAACA	-18	NA	113221391	113206303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113206579_113207211_113207297_113211476_113211593_113221190
transcript_143028.known	chr9	+	4762	5	FSM	ENSG00000136868.11	ENST00000374212.5	4762	5	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_4	32.962099447699	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGTCTTTCTGCCCAGA	113212813	True	NA	11	True	AATAAA	-22	NA	113221543	113264492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113221679_113256113_113256278_113257112_113257186_113258693_113258863_113260271
transcript_143046.nnic	chr9	-	873	4	NNC	ENSG00000176386.9	novel	871	4	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	565.945227031733	795	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	NA	False	NA	-50	True	AATAAA	-33	NA	113275602	113266991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_113267440_113272426_113272549_113273328_113273411_113275381
transcript_143055.known	chr9	+	475	2	FSM	ENSG00000136868.11	ENST00000496650.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTTCTAGTTTCTG	113212856	True	NA	NA	False	AATAAA	-16	NA	113221586	113227660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113221679_113227277
transcript_143056.known	chr9	-	871	4	FSM	ENSG00000176386.9	ENST00000374206.4	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	784	junction_3	225.04271199535	12817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTATAACAGTACTGTT	-113261617	True	NA	-50	True	AATAAA	-33	NA	113275572	113266991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113267440_113272426_113272549_113273328_113273439_113275381
transcript_143057.known	chr9	-	703	5	FSM	ENSG00000176386.9	ENST00000490408.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	529.526675437603	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATCTTTACTCAGAATTAT	-113261594	True	NA	NA	False	AATAAA	-15	NA	113275549	113255834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113256044_113256454_113256549_113272426_113272549_113273328_113273439_113275381
transcript_143061.known	chr9	+	2897	14	FSM	ENSG00000136875.13	ENST00000374198.5	2897	14	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	28.3129175779387	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGGTCCATAGAGGTC	113268493	True	NA	28	True	TATAAA	-38	NA	113275657	113292905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113275771_113276547_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_143068.known	chr9	+	4020	14	FSM	ENSG00000136875.13	ENST00000374199.9	4020	14	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	72.3189025679943	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTATTAGTTCCCTTC	113268477	True	NA	5	True	TTTAAA	-1	NA	113275641	113294009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113275771_113276544_113276726_113278944_113279132_113282645_113282734_113283131_113283212_113283388_113283483_113284294_113284390_113286231_113286291_113286704_113286829_113288174_113288265_113290465_113290589_113290699_113290808_113290897_113291017_113291466
transcript_143069.known	chr9	-	1366	2	FSM	ENSG00000165188.14	ENST00000441031.3	1366	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCACTTATTCATTCC	NA	False	NA	NA	False	AGTAAA	-20	NA	113299196	113297092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113298222_113298959
transcript_14307.nic	chr1	-	2198	9	NIC	ENSG00000174606.14	novel	4690	9	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	67.5248796740875	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-213015092	False	NA	9	True	AATATA	-26	NA	213015535	212994728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015225
transcript_143070.known	chr9	+	2328	6	FSM	ENSG00000119411.11	ENST00000374183.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	11.1175536877498	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGATTTATTCCATGTT	113348693	True	NA	4	True	ATTAAA	-14	NA	113349540	113371222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113349781_113354239_113354339_113360506_113360738_113362368_113362395_113368258_113368384_113369615
transcript_143071.known	chr9	-	913	3	FSM	ENSG00000119431.10	ENST00000485934.1	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	20	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGACCTCCGAGGCTG	-113376145	True	NA	NA	False	NA	NA	NA	113376925	113373887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113374530_113375452_113375527_113376728
transcript_143072.known	chr9	-	1481	3	FSM	ENSG00000119431.10	ENST00000374180.4	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	22	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTCCTAGCCTCTGCCC	-113376206	True	NA	-9	True	AATAAA	-37	NA	113376986	113373421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113374530_113375452_113375568_113376728
transcript_143077.known	chr9	-	3129	12	FSM	ENSG00000148218.16	ENST00000409155.8	3129	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	8.45112345213971	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTACTGAATGTCTTGT	-113401269	False	4920	-5	True	AATAAA	-43	NA	113401284	113386311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392170_113393446_113393635_113401211
transcript_143078.known	chr9	-	3247	12	FSM	ENSG00000148218.16	ENST00000482847.5	3247	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	23.9900116956417	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTACAGTTTCTACTGAAT	-113401228	False	NA	-12	True	AATAAA	-36	NA	113401243	113386318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113388362_113388976_113389107_113389437_113389525_113389598_113389687_113389772_113389829_113390404_113390494_113390592_113390677_113390797_113390934_113391526_113391624_113392118_113392336_113393446_113393635_113401211
transcript_14308.nnic	chr1	-	1968	9	NNC	ENSG00000174606.14	novel	4690	9	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_8	91.3769664631082	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTTCATTTCATAAT	-213015075	False	NA	9	True	AATATA	-26	NA	213015518	212994728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015438
transcript_143084.known	chr9	-	547	2	FSM	ENSG00000148218.16	ENST00000494848.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGTAAAGTGCTATGTAC	-113401269	False	4920	NA	False	NA	NA	NA	113401284	113393160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113393635_113401211
transcript_143087.known	chr9	-	2194	5	FSM	ENSG00000148229.13	ENST00000374171.5	2194	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	161.318590063266	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-113410660	False	NA	-4	True	AATAAA	-16	NA	113410675	113407234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227_113410409_113410616
transcript_143088.known	chr9	-	2109	4	FSM	ENSG00000148229.13	ENST00000374169.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	16.9705627484771	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCCTCCTGTTTCATGC	-113405462	True	NA	-4	True	AATAAA	-16	NA	113410382	113407234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113408984_113409609_113409729_113410054_113410141_113410227
transcript_143089.known	chr9	-	455	3	FSM	ENSG00000148229.13	ENST00000475080.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GCAAAAGAAGAAGGACAAAG	-113405430	True	NA	-13	True	NA	NA	NA	113410350	113408943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_113408984_113409609_113409729_113410054
transcript_14309.known	chr1	-	4690	9	FSM	ENSG00000174606.14	ENST00000366962.8	4690	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	74.5334446741864	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCTGAAGGTTTT	-213015424	False	NA	NA	False	AATAAA	-15	NA	213015867	212992181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_212995193_212997154_212997319_213000325_213000384_213000785_213000913_213005032_213005455_213007128_213007199_213008209_213008467_213013092_213013419_213015612
transcript_143090.known	chr9	+	1994	14	FSM	ENSG00000157653.12	ENST00000374165.6	1994	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.85963543006786	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTATTTTCTGTTTCTAG	113410648	True	NA	NA	False	ATTAAA	-23	NA	113410746	113429690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113411002_113413444_113413645_113413758_113413895_113419107_113419166_113421102_113421204_113422548_113422586_113423325_113423499_113424165_113424317_113425018_113425077_113425343_113425421_113425642_113425731_113428146_113428224_113428899_113428964_113429171
transcript_143094.known	chr9	+	1503	5	FSM	ENSG00000138835.22	ENST00000620489.1	1503	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	10.8397416943394	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTTGACCCTTTTTGTG	113593213	True	NA	9	True	AATAAA	-18	NA	113594128	113597729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_113594339_113594429_113594532_113594918_113594981_113595598_113595766_113596767
transcript_143095.nic	chr9	+	518	4	ISM	ENSG00000138835.22	ENST00000317613.10	2542	18	-55	57749	-52	-1351	5prime_fragment	FALSE	canonical	3	13	junction_2	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAACCAAAACAAAA	113463172	True	NA	NA	False	NA	NA	NA	113463676	113484340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_113463882_113479490_113479542_113483058_113483118_113484137
transcript_143098.nic	chr9	+	1199	2	ISM	ENSG00000138835.22	ENST00000317613.10	2542	18	-55	61605	-52	-5207	5prime_fragment	FALSE	canonical	3	16	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACATTCCAAAAATAGCG	113463172	True	NA	NA	False	AAAAAG	-6	NA	113463676	113480484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_113463882_113479490
transcript_143099.known	chr9	-	1262	10	FSM	ENSG00000106927.12	ENST00000265132.8	1262	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_8	2.29868454061969	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-114078194	False	NA	2	True	AATAAA	-24	NA	114078300	114060126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_114060271_114060924_114061099_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_1431.known	chr1	+	1366	6	FSM	ENSG00000041988.16	ENST00000054650.9	1361	6	-2	-3	-2	3	multi-exon	FALSE	canonical	0	0	junction_1	44.2248798754728	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTCCCATCATCATTT	6624837	True	NA	17	True	AATAAA	-17	NA	6624865	6633565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6624955_6625149_6625293_6628498_6628692_6630287_6630354_6632390_6632496_6632795
transcript_143100.nnic	chr9	-	1276	9	NIC	ENSG00000106927.12	novel	1262	10	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	2.77263412660235	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTGTCCTCATTGTTCA	-114078382	True	NA	2	True	AATAAA	-24	NA	114078488	114060126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_114060271_114061423_114061592_114062676_114062759_114069698_114069746_114072924_114073027_114074035_114074153_114074959_114075037_114076597_114076741_114078092
transcript_143101.known	chr9	+	764	6	FSM	ENSG00000229314.6	ENST00000259396.9	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.4	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAGTCATTTGTTCAT	NA	False	NA	NA	False	AATAAA	-24	NA	114323097	114326479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114323248_114323662_114323806_114324017_114324089_114324789_114324898_114325048_114325153_114326291
transcript_143103.nnic	chr9	+	729	6	NNC	ENSG00000228278.5	novel	759	6	NA	NA	-2637	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.0591260281974	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGCTGTTAGTCATTTG	114327160	True	NA	NA	False	AATAAA	-19	NA	114327231	114333251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_114327352_114330433_114330577_114330791_114330863_114331566_114331675_114331825_114331930_114333068
transcript_143108.known	chr9	-	1718	2	FSM	ENSG00000095397.16	ENST00000374057.3	1718	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTATTGATTGGCTT	-114503967	True	NA	NA	False	AATAAA	-18	NA	114505450	114478320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_114478772_114504183
transcript_143109.known	chr9	+	1385	3	FSM	ENSG00000136888.8	ENST00000678234.1	1385	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1287.5	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAGCACACATATCACATA	114561384	True	NA	-50	True	NA	NA	NA	114587761	114598496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114588119_114592551_114592653_114597569
transcript_143114.known	chr9	+	978	2	FSM	ENSG00000136888.8	ENST00000677452.1	978	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCATTCTTTTTTTTTTCC	114561374	True	NA	23	True	AGTAAA	-20	NA	114587751	114598378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114587921_114597569
transcript_143117.known	chr9	+	1563	3	FSM	ENSG00000136888.8	ENST00000374050.4	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_2	20.5	9641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGACTCAGGATTTTATTT	114561391	True	NA	19	True	AATACA	-32	NA	114587768	114598879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114587921_114592551_114592653_114597569
transcript_143118.known	chr9	+	470	2	FSM	ENSG00000136888.8	ENST00000473413.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTAGTTTCTGATCCCCTG	114561399	True	NA	NA	False	NA	NA	NA	114587776	114592679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114588119_114592551
transcript_143119.known	chr9	+	439	4	FSM	ENSG00000136888.8	ENST00000679150.1	439	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1236.02265351409	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGAGAAGCACCTGTGCT	114561461	True	NA	NA	False	CATAAA	-8	NA	114587838	114597743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_114587921_114592551_114592653_114596506_114596589_114597569
transcript_143123.nnic	chr9	-	456	3	NNC	ENSG00000234692.1	novel	427	3	NA	NA	-144	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACATGCCACTAATATGAT	NA	False	NA	-16	True	AATAAA	-15	NA	115254395	115252537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_115252847_115253112_115253164_115254299
transcript_143146.known	chr9	-	1757	9	FSM	ENSG00000148219.18	ENST00000341734.8	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	26.4338797757726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686220	True	NA	-5	True	ATTAAA	-18	NA	116687234	116425227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_116425627_116425875_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_143148.nic	chr9	-	2025	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-19	0	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGCTTGGGTGGTATTT	-116686239	True	NA	-5	True	ATTAAA	-18	NA	116687253	116425227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_143149.nic	chr9	-	1642	8	NIC	ENSG00000148219.18	novel	1757	9	NA	NA	-19	-21	intron_retention	FALSE	canonical	3	41	junction_7	14.5195153683108	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAAAGTCTCTCCTTTTTA	-116686239	True	NA	-2	True	NA	NA	NA	116687253	116425610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_116426089_116440608_116440793_116442452_116442554_116487358_116487501_116618323_116618473_116620309_116620444_116651527_116651794_116687065
transcript_143152.known	chr9	+	3688	2	FSM	ENSG00000119401.11	ENST00000373983.2	3688	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTGTTCTTTTCATC	116686139	True	NA	4	True	ATTAAA	-16	NA	116687329	116701300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_116687382_116697664
transcript_143154.known	chr9	+	3715	2	FSM	ENSG00000119401.11	ENST00000450136.2	3715	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTGTTCTTTTCAT	116686114	True	NA	3	True	ATTAAA	-15	NA	116687304	116701299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_116687382_116697661
transcript_143159.known	chr9	-	468	1	FSM	ENSG00000230734.1	ENST00000431607.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3199	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTCCAGATCAGTTGTT	NA	False	NA	NA	False	AATAAA	-33	NA	117181095	117180627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_117180600_117181100
transcript_143161.known	chr9	-	3171	8	FSM	ENSG00000078725.13	ENST00000265922.8	3171	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	8.87095696929144	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTTATGCTTAATT	-119368034	True	NA	-20	True	GATAAA	-27	NA	119369435	119166628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_119168225_119208718_119208942_119213918_119214156_119238654_119238761_119242046_119242217_119248959_119249151_119313137_119313406_119369055
transcript_143169.known	chr9	-	5551	35	FSM	ENSG00000136861.19	ENST00000360822.8	5173	35	-11	-367	0	6	multi-exon	FALSE	canonical	1	1	junction_17	33.6190880242873	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGATTCTGTTGTTTTGTGTG	-120577410	True	NA	-1	True	ATTAAA	-24	NA	120580170	120388868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120389293_120389740_120389788_120394511_120394639_120400741_120400886_120402805_120403072_120404035_120404114_120407011_120407249_120408346_120408469_120409126_120409317_120411357_120411475_120415039_120415160_120419787_120419961_120422692_120422742_120437294_120437528_120439398_120439973_120443619_120443743_120447894_120448127_120467859_120467998_120470110_120470218_120471747_120471879_120477349_120477451_120487293_120487438_120491306_120491478_120518426_120518646_120524985_120525079_120527805_120527926_120528743_120528798_120529977_120530141_120536371_120536527_120539040_120539165_120545713_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_143170.nic	chr9	-	971	5	ISM	ENSG00000136861.19	ENST00000472883.2	970	11	-110	17413	-1	-17413	5prime_fragment	FALSE	canonical	3	30	junction_3	5.95818764390649	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTCTTTTGTGTCTGGC	-120577411	True	NA	NA	False	TATAAA	-16	NA	120580171	120545318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120545791_120550791_120550903_120568320_120568389_120571973_120572042_120579919
transcript_143173.known	chr9	-	9142	8	FSM	ENSG00000119402.18	ENST00000608872.6	9142	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_7	43.3843760083357	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATGCGTTGAAGTGTTCT	-120785859	True	NA	2	True	NA	NA	NA	120793416	120756973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120764848_120771347_120771518_120772753_120772841_120776092_120776227_120778350_120778546_120787768_120788279_120793148_120793258_120793353
transcript_143181.nnic	chr9	+	1945	3	NNC	ENSG00000214654.9	novel	3856	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	6	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTTTGAGTCCCTT	120792650	True	NA	23	True	AATAAA	-34	NA	120793473	120801787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_120793923_120798574_120799986_120801702
transcript_143182.known	chr9	+	430	2	FSM	ENSG00000214654.9	ENST00000437707.2	3574	2	48	3096	48	-87	multi-exon	FALSE	canonical	3	12	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCATGCCTTGCTTTTT	120792727	True	NA	NA	False	NA	NA	NA	120793550	120798632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120793923_120798574
transcript_143188.known	chr9	-	3381	10	FSM	ENSG00000095261.14	ENST00000210313.8	3381	10	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	67.1284010104682	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGTTGACTGCCTATTA	-120835406	True	NA	19	True	AATAAA	-35	NA	120842922	120816052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120818164_120820838_120820980_120821354_120821465_120824493_120824686_120826764_120826908_120829098_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_143199.nic	chr9	-	1726	5	ISM	ENSG00000095261.14	ENST00000210313.8	3381	10	-392	12396	-363	-1854	5prime_fragment	FALSE	canonical	3	436	junction_1	76.5996083540902	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAATATGAGCTTTTC	-120843272	True	NA	NA	False	NA	NA	NA	120843314	120828448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120829209_120831330_120831460_120831831_120831946_120833311_120833457_120842736
transcript_143200.known	chr9	+	1970	4	FSM	ENSG00000226752.10	ENST00000640066.1	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	14.7044966667418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGACTGCCTGTATTGCT	120842180	True	NA	NA	False	AGTAAA	-29	NA	120843099	120852603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120843440_120844992_120845197_120847293_120847354_120851237
transcript_143204.known	chr9	+	707	3	FSM	ENSG00000226752.10	ENST00000640391.2	2751	3	0	2044	0	-8	multi-exon	FALSE	canonical	2	2	junction_1	17	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATCTCTGGATTTCATGT	NA	False	NA	NA	False	NA	NA	NA	120842995	120851440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120843440_120847293_120847354_120851237
transcript_143209.known	chr9	-	567	3	FSM	ENSG00000095261.14	ENST00000471789.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	22	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTAGTAAACCCCTTTC	-120835366	True	NA	NA	False	AATAAA	-14	NA	120842882	120831669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120831946_120833311_120833457_120842736
transcript_143211.nic	chr9	+	719	2	ISM	ENSG00000226752.10	ENST00000640296.2	1606	4	23	6154	-10	-8	5prime_fragment	FALSE	canonical	3	3	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGCATCTGGTTTGTGA	120842145	True	NA	NA	False	TTTAAA	-21	NA	120843064	120845336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_120843440_120844992
transcript_143212.known	chr9	+	884	2	FSM	ENSG00000226752.10	ENST00000458394.2	2154	2	1225	45	-413	-45	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGAAATTTTGTT	120844279	False	NA	NA	False	AAAAAG	-23	NA	120844299	120845276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_120844900_120844992
transcript_143214.known	chr9	-	4149	15	FSM	ENSG00000119403.15	ENST00000373896.8	4149	15	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	36.5438651709511	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTCTTCCCTATAGTGAA	-120875961	True	NA	37	True	TTTAAA	-20	NA	120877188	120855650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120861917_120862006_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120869181_120869331_120869844_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_143215.known	chr9	-	1092	9	FSM	ENSG00000119403.15	ENST00000487555.5	1092	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	9.25253343684853	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGGGGTCCTGAAAACC	-120868833	False	1227	NA	False	NA	NA	NA	120868844	120857929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120858287_120860089_120860186_120861088_120861175_120862587_120862750_120864048_120864117_120865709_120865831_120866027_120866097_120866869_120866966_120868807
transcript_143218.nic	chr9	-	854	5	ISM	ENSG00000119403.15	ENST00000436309.5	558	6	-70	288	-70	0	5prime_fragment	FALSE	canonical	0	0	junction_4	45.0721643589478	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-120877085	False	NA	-34	True	AATAAA	-27	NA	120877096	120869586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120876980
transcript_143219.known	chr9	-	836	5	FSM	ENSG00000119403.15	ENST00000312189.10	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	11.2333209693305	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGTAAATACATGTTGG	-120875961	True	NA	-34	True	AATAAA	-27	NA	120877188	120869586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_120869946_120870442_120870539_120873978_120874061_120874555_120874757_120877090
transcript_14322.nic	chr1	-	1523	4	ISM	ENSG00000174606.14	ENST00000366962.8	4690	9	-25	14357	-25	0	5prime_fragment	FALSE	canonical	3	76	junction_3	52.8667087011182	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGGTCCCATATACTTG	NA	False	NA	NA	False	AATAAA	-20	NA	213015892	213006538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_213007199_213008209_213008467_213013092_213013419_213015612
transcript_143224.nic	chr9	+	1691	10	ISM	ENSG00000119397.19	ENST00000687169.1	9959	43	-69	63739	-3	0	5prime_fragment	FALSE	canonical	2	4	junction_2	3.12694383988229	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACTGGAAGACAAAGAAAAA	121074877	False	NA	NA	False	NA	NA	NA	121074892	121113691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_121075068_121080305_121080479_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501
transcript_143225.known	chr9	+	2027	11	ISM	ENSG00000119397.19	ENST00000373847.6	5449	32	-209	42934	93	4847	5prime_fragment	FALSE	canonical	3	5	junction_1	3.0347981810987	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTACATATTACATGTCTC	121074729	False	NA	NA	False	AGTAAA	-23	NA	121074752	121118571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_121075068_121088295_121088544_121090274_121090406_121094887_121095019_121096421_121096564_121098385_121098573_121107801_121107996_121112458_121112579_121113501_121113725_121115090_121115201_121118345
transcript_143232.known	chr9	+	2595	18	FSM	ENSG00000148180.21	ENST00000432226.7	2595	18	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	42.3457510236598	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCTAGTGTGGCTCGTTT	121266750	True	NA	15	True	AATAAA	-17	NA	121268161	121332842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_121268220_121281469_121281563_121301962_121302168_121302910_121303066_121310683_121310846_121312338_121312489_121313933_121314024_121317085_121317219_121318405_121318495_121318664_121318881_121321267_121321402_121324553_121324645_121326511_121326683_121327307_121327483_121328890_121329016_121329237_121329316_121331387_121331449_121332433
transcript_143237.known	chr9	-	4149	8	FSM	ENSG00000119396.11	ENST00000373840.9	4149	8	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_5	38.386859996725	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGCACTGTGCTGCTCT	-121198395	True	NA	NA	False	AATAAA	-19	NA	121201869	121178132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121181574_121182929_121182961_121183310_121183399_121186952_121187020_121190553_121190732_121192170_121192225_121193360_121193420_121201638
transcript_14324.nic	chr1	-	1243	4	NIC	ENSG00000174606.14	novel	1243	3	NA	NA	-42	-310	combination_of_known_junctions	FALSE	canonical	3	112	junction_3	37.5618009271239	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGGCATATTTTGGC	-213015092	False	NA	-10	True	ATTAAA	-19	NA	213015535	213006848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_213007199_213008209_213008467_213013092_213013419_213015225
transcript_143244.known	chr9	-	3145	7	FSM	ENSG00000148175.13	ENST00000286713.7	3145	7	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.8836956466506	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTGGTTGGCTTCTTC	-121366642	True	NA	75	True	NA	NA	NA	121370250	121338986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_121341409_121348014_121348150_121349119_121349324_121353219_121353303_121354600_121354674_121356052_121356157_121370126
transcript_14325.nic	chr1	-	1213	4	ISM	ENSG00000174606.14	ENST00000366962.8	4690	9	-25	14667	-25	-310	5prime_fragment	FALSE	canonical	3	76	junction_3	52.8667087011182	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGGCATATTTTGGC	NA	False	NA	-10	True	ATTAAA	-19	NA	213015892	213006848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_213007199_213008209_213008467_213013092_213013419_213015612
transcript_143252.nnic	chr9	-	681	3	NIC	ENSG00000119421.7	novel	804	4	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	3	100	junction_2	766.5	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122159802	False	NA	-12	True	ATTAAA	-15	NA	122159820	122144057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_122144379_122148111_122148278_122159626
transcript_143254.known	chr9	-	804	4	FSM	ENSG00000119421.7	ENST00000373768.4	804	4	0	0	0	0	multi-exon	FALSE	canonical	3	1511	junction_2	52.6181210864343	8420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTTGTATTTTATTATGTT	-122141685	True	NA	-12	True	ATTAAA	-15	NA	122159779	122144057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122144379_122148111_122148278_122152244_122152409_122159626
transcript_143255.known	chr9	+	596	4	FSM	ENSG00000185681.13	ENST00000536616.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGTGTATTTTCCTTAA	NA	False	NA	NA	False	AATAAA	-21	NA	122159907	122200088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122160020_122166767_122166916_122174495_122174628_122199884
transcript_143260.known	chr9	+	1186	9	FSM	ENSG00000148187.18	ENST00000470366.5	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	64.2470816457837	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGGGACTTCTCTCCCTCC	122261743	True	NA	NA	False	NA	NA	NA	122264925	122322678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122285779_122285947_122286038_122286167_122291748_122291841_122313226_122313387_122322539
transcript_143279.known	chr9	-	889	7	FSM	ENSG00000119446.14	ENST00000483428.1	889	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	168.482442210853	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAATGTTTTTGGATGTTCT	-122261814	True	NA	-119	True	NA	NA	NA	122264794	122241757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122254273_122254368_122261379_122261509_122264714
transcript_143281.known	chr9	+	9594	7	FSM	ENSG00000148187.18	ENST00000344641.8	9594	7	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	15.2388392675499	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATAAGTTGGTGATTCTTT	122261699	True	NA	NA	False	ATTAAA	-21	NA	122264881	122331337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_143292.known	chr9	-	4977	6	FSM	ENSG00000119446.14	ENST00000417201.4	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	22.6503863101714	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTTTCTTAGTCAATGT	-122261860	True	NA	NA	False	AATAAA	-32	NA	122264840	122237621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122242044_122245255_122245342_122247517_122247605_122251846_122251974_122261379_122261509_122264714
transcript_143296.known	chr9	+	1176	6	FSM	ENSG00000148187.18	ENST00000373723.9	1176	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	60.294610041031	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTCTGGATTGATGATC	122261712	True	NA	NA	False	AATAAA	-36	NA	122264894	122323092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
transcript_14330.known	chr1	-	851	3	FSM	ENSG00000174606.14	ENST00000481918.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	22.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGCAAAATATTATTG	-213013207	True	NA	NA	False	ATTAAA	-16	NA	213015493	213008209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_213008467_213013092_213013419_213015225
transcript_143301.known	chr9	+	1841	6	FSM	ENSG00000148187.18	ENST00000297908.7	1841	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	61.6421933418985	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	122264570	True	NA	13	True	AATAAA	-23	NA	122264602	122323461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122264939_122270863_122271076_122285168_122285288_122291748_122291841_122313226_122313387_122322539
transcript_14332.known	chr1	+	5505	15	FSM	ENSG00000136643.12	ENST00000366960.8	5505	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	12.987631478779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTCTCATTTGATTTTT	213048770	True	NA	5	True	CATAAA	-15	NA	213051240	213274774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316_213117411_213129526_213129890_213167857_213167974_213176399_213176493_213230496_213230545_213232122_213232256_213240701_213242298_213242568_213242659_213261557_213261641_213262720_213262817_213272523
transcript_143320.known	chr9	+	1501	5	FSM	ENSG00000148187.18	ENST00000394315.3	1501	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	67.160256104336	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGCTGACTTCTTTTCTT	122270851	True	NA	13	True	AATAAA	-23	NA	122270863	122323461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122271076_122280442_122280599_122285168_122285288_122291748_122291841_122322539
transcript_143327.known	chr9	-	3017	4	FSM	ENSG00000136940.14	ENST00000259467.9	3017	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	26.5120517668642	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTTCACCATGTTGGCC	-122824413	True	NA	NA	False	NA	NA	NA	122828588	122818096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122820637_122823015_122823198_122826615_122826793_122828470
transcript_143332.nnic	chr9	-	1013	3	NIC	ENSG00000136940.14	novel	3017	4	NA	NA	-16	604	combination_of_known_splicesites	FALSE	canonical	3	28	junction_2	155	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAATGCTGAATAACCTT	-122824429	True	NA	-11	True	AATAAA	-18	NA	122828604	122819939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_122820637_122823015_122823198_122828470
transcript_143335.known	chr9	-	3623	18	FSM	ENSG00000056586.16	ENST00000423239.6	3623	18	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_2	21.6834732084282	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAATCTTGCTCTATCG	-122902706	True	NA	50	True	NA	NA	NA	122905341	122853744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122854087_122854184_122854267_122854530_122854616_122855183_122855398_122855731_122855879_122857922_122858094_122858668_122859103_122859916_122860132_122865348_122865658_122877470_122877584_122879754_122879874_122879992_122880126_122880593_122880795_122883203_122883380_122890311_122890546_122892908_122893027_122897278_122897577_122905109
transcript_143339.known	chr9	-	923	6	FSM	ENSG00000056586.16	ENST00000454740.5	923	6	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	21.9308002589965	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTTACTAGGGTAACA	NA	False	NA	NA	False	AAAAAG	-5	NA	122854606	122849436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122849823_122851099_122851230_122851322_122851437_122853951_122854087_122854184_122854267_122854530
transcript_143340.known	chr9	-	4099	2	FSM	ENSG00000186130.5	ENST00000373659.4	4099	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACAATGTGTTTTGTCTTC	-122912337	True	NA	-4	True	AATAAA	-18	NA	122913323	122908055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122912082_122913250
transcript_143345.known	chr9	-	4455	2	FSM	ENSG00000171448.9	ENST00000373656.4	4455	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGTCATTGGTTAT	-122930890	True	NA	NA	False	AATAAA	-16	NA	122931512	122915565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122919945_122931436
transcript_143349.known	chr9	+	914	1	FSM	ENSG00000261094.2	ENST00000566531.1	914	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAACCTTGTCCATTTCTG	122939154	False	NA	10	True	AATAAA	-27	NA	122939419	122940333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122939400_122940300
transcript_143357.nic	chr9	+	831	4	ISM	ENSG00000011454.18	ENST00000317419.7	2186	5	-19	4251	-19	102	5prime_fragment	FALSE	canonical	3	164	junction_1	29.9592315581618	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACTTGTGTAACGTTTC	122934497	True	NA	NA	False	AATAAA	-18	NA	122941000	122986518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214
transcript_143360.known	chr9	+	572	4	FSM	ENSG00000011454.18	ENST00000459903.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	102.066427171502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGAGACTGGTTTGTTG	122934516	True	NA	NA	False	NA	NA	NA	122941019	122986416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122941094_122957148_122957210_122984484_122984720_122986214
transcript_143364.known	chr9	+	4986	26	FSM	ENSG00000011454.18	ENST00000373647.9	4986	26	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	18.9937252796812	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCATTGCTTTGTAAAAAC	122934516	True	NA	13	True	ATTAAA	-19	NA	122941019	123104866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_122941094_122957010_122957210_122984484_122984720_122986214_122986420_122989296_122989472_122990055_122990214_122996040_122996152_122996538_122996606_122997258_122997362_122998596_122998767_123010353_123010529_123015542_123015637_123020308_123020460_123065347_123065462_123070349_123070425_123073551_123073678_123074284_123074429_123076244_123076287_123076633_123076763_123089757_123089851_123090274_123090386_123097740_123097846_123098714_123098799_123099477_123099550_123101565_123101764_123103090
transcript_143365.known	chr9	-	325	2	FSM	ENSG00000286718.2	ENST00000656036.2	519	2	0	194	0	-194	multi-exon	FALSE	canonical	1	5	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATGGAAGCGGACTGGGTA	-122941222	True	NA	NA	False	NA	NA	NA	122941260	122940732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_122940936_122941138
transcript_143369.known	chr9	-	3612	21	FSM	ENSG00000119522.17	ENST00000373620.7	3612	21	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	18.8586187193018	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGGCTACTTCCATTAC	-123928875	True	NA	NA	False	ACTAAA	-13	NA	123930126	123400098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_123401913_123403401_123403491_123440359_123440492_123450692_123450750_123452275_123452348_123454738_123454780_123457347_123457436_123457792_123457898_123557569_123557696_123583168_123583271_123609435_123609482_123630375_123630477_123652012_123652124_123667025_123667080_123671290_123671372_123676719_123676790_123757702_123757823_123769513_123769564_123792586_123792631_123878950_123879022_123929888
transcript_14337.nic	chr1	+	1263	5	ISM	ENSG00000136643.12	ENST00000615329.4	4022	13	8	155427	0	-58667	5prime_fragment	FALSE	canonical	3	102	junction_2	4.15331193145904	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCTTACTCATTTCTTTA	213048770	True	NA	NA	False	NA	NA	NA	213051240	213118037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_213051510_213071005_213071042_213077695_213077817_213104453_213104570_213117316
transcript_143379.known	chr9	-	967	7	FSM	ENSG00000136930.13	ENST00000498485.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	919.568452530256	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTGGGCACTGTGTGGT	-124392292	False	NA	-5	True	AATAAA	-26	NA	124415291	124353465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124412351_124412493_124413907_124414006_124414841_124414936_124415112
transcript_143381.known	chr9	-	984	8	FSM	ENSG00000136930.13	ENST00000259457.8	984	8	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_2	94.3616577269581	23134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGGGCACTGTGTGGTG	-124392443	True	NA	-4	True	AATAAA	-27	NA	124415442	124353464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124353710_124356763_124356916_124384597_124384657_124405316_124405433_124412351_124412493_124413907_124414006_124414841_124414936_124415363
transcript_143383.known	chr9	+	662	2	FSM	ENSG00000224020.2	ENST00000429139.2	717	2	55	0	36	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTTTTAACTTTTTTTA	124658410	False	NA	NA	False	AATAAA	-18	NA	124658466	124698631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_124658742_124698244
transcript_14340.known	chr1	+	3809	11	FSM	ENSG00000143499.14	ENST00000491455.5	3809	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	10.6494131293701	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	214280724	True	NA	8	True	ATTAAA	-13	NA	214281101	214337131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214281428_214305186_214305251_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214334309_214336703
transcript_143405.known	chr9	-	452	4	FSM	ENSG00000136942.15	ENST00000348462.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	23069	junction_3	3348.45300930976	295921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656746	True	NA	-17	True	AATAAA	-17	NA	124861957	124857882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858068_124860182_124860265_124861418_124861556_124861909
transcript_143406.known	chr9	-	785	3	FSM	ENSG00000136942.15	ENST00000487431.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	28114	junction_1	1539	4405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTGTTTCCTGGCACT	-124656725	True	NA	-17	True	AATAAA	-17	NA	124861936	124857882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858068_124860182_124860265_124861418
transcript_143407.known	chr9	-	493	5	FSM	ENSG00000136942.15	ENST00000373570.8	493	5	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	13803.3373930908	2090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTTCCTGGCACTTCC	-124656704	True	NA	-14	True	AATAAA	-20	NA	124861915	124857879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858068_124858457_124858538_124860182_124860265_124861418_124861556_124861909
transcript_143408.known	chr9	-	340	4	FSM	ENSG00000136942.15	ENST00000629845.1	340	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	13168.1220208333	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGCCGAGGTAATGGTA	-124656750	True	NA	NA	False	NA	NA	NA	124861961	124858468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124858538_124860182_124860265_124861418_124861556_124861909
transcript_143409.known	chr9	-	649	2	FSM	ENSG00000136942.15	ENST00000495728.1	649	2	0	0	0	0	multi-exon	FALSE	canonical	3	23069	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTGTAGTCCCAGCTAC	-124656770	True	NA	NA	False	NA	NA	NA	124861981	124860978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124861556_124861909
transcript_14341.known	chr1	+	1618	11	FSM	ENSG00000143499.14	ENST00000460580.5	1618	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	18.2945347030199	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGGTTTGTATTTTCTT	214281204	False	NA	8	True	ATTAAA	-13	NA	214281221	214337131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214281428_214314761_214314873_214318078_214318140_214318858_214318984_214324640_214324709_214327621_214327725_214330167_214330279_214330949_214331071_214332017_214332193_214334199_214334309_214336703
transcript_143410.known	chr9	+	1325	4	FSM	ENSG00000136950.13	ENST00000259477.6	1325	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	589.792242140306	1631	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAATAATTGATCTA	124856115	True	NA	NA	False	AATAAA	-7	NA	124869204	124877717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_124869440_124873691_124873765_124874974_124875152_124876877
transcript_143413.known	chr9	-	1968	19	FSM	ENSG00000173611.18	ENST00000373549.8	1968	19	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_16	12.0959385082375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAAGTTTTCATTTTCCA	-125141668	True	NA	NA	False	ATTAAA	-19	NA	125143496	124952787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125065989_125066059_125142632_125142678_125143384
transcript_143416.nnic	chr9	-	809	5	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-27	-52293	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	24.2731847931004	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	-125141727	True	NA	-8	True	AATAAA	-27	NA	125143555	125052203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125052596_125055875_125056008_125065989_125066059_125142632_125142678_125143384
transcript_143417.nnic	chr9	-	933	4	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-220	-52293	at_least_one_novel_splicesite	FALSE	canonical	2	28	junction_1	15.2534149181967	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTACTTTTGGTATT	-125143695	False	NA	-8	True	AATAAA	-27	NA	125143748	125052203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125052596_125055875_125056008_125142632_125142678_125143384
transcript_143418.nnic	chr9	-	652	3	NNC	ENSG00000173611.18	novel	546	2	NA	NA	10	47333	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	32.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTAGTTTCTTGTGTAAC	-125141690	True	NA	NA	False	TTTAAA	-19	NA	125143518	125094920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125095394_125142632_125142678_125143384
transcript_143419.nnic	chr9	-	837	3	NNC	ENSG00000173611.18	novel	546	2	NA	NA	-5	596	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	31.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTTCTTATTGCTTTATC	-125141683	True	NA	NA	False	AATAAA	-17	NA	125143511	125141657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_125142323_125142632_125142678_125143384
transcript_143422.known	chr9	-	546	2	FSM	ENSG00000173611.18	ENST00000468569.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGGAGGATCATTTGA	-125141678	True	NA	NA	False	NA	NA	NA	125143506	125142253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125142678_125143384
transcript_143424.known	chr9	-	12111	18	FSM	ENSG00000173611.18	ENST00000336505.11	12111	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	12.2352941176471	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGGTACTTTTTCGGT	-125141700	True	NA	0	True	AATAAA	-16	NA	125143528	124942607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124952954_124971369_124971471_124971670_124971845_124976113_124976187_124994933_124995016_124999890_124999991_125001964_125002044_125003113_125003216_125003468_125003571_125018798_125018952_125019106_125019206_125020672_125020770_125026811_125026911_125028391_125028479_125029643_125029740_125055875_125056008_125142632_125142678_125143384
transcript_143425.known	chr9	-	4877	23	FSM	ENSG00000136935.14	ENST00000373555.9	4877	23	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_22	8.63492811035937	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAAGGGCTAGAGAATGT	-124940021	True	NA	75	True	ATTAAA	-41	NA	124941083	124878274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_124880611_124881170_124881258_124881783_124881955_124882509_124882570_124888252_124888397_124889142_124889304_124889433_124889537_124890388_124890479_124898548_124898645_124899328_124899479_124900451_124900548_124908376_124908473_124911900_124912027_124921128_124921241_124921722_124921893_124923094_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
transcript_143428.nic	chr9	-	1062	8	ISM	ENSG00000136935.14	ENST00000373555.9	4877	23	-2	44639	-2	5335	5prime_fragment	FALSE	canonical	3	33	junction_7	10.1820169606888	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTTTTTCTGTTTTGTT	-124940023	True	NA	NA	False	ATTAAA	-22	NA	124941085	124922913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_124923224_124926708_124926742_124928187_124928286_124929215_124929291_124931315_124931407_124938576_124938867_124940105_124940156_124940970
transcript_143431.nic	chr9	-	702	2	ISM	ENSG00000136935.14	ENST00000373555.9	4877	23	-2	61294	-2	8038	5prime_fragment	FALSE	canonical	3	33	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-124940023	True	NA	NA	False	NA	NA	NA	124941085	124939568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_124940156_124940970
transcript_143432.known	chr9	-	4349	8	FSM	ENSG00000119414.12	ENST00000451402.5	4349	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	180.195811861	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGTTGCTTGACTGGTG	NA	False	NA	-2	True	ATTAAA	-17	NA	125189939	125146573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125188918_125188948_125189561
transcript_143433.known	chr9	-	4103	7	FSM	ENSG00000119414.12	ENST00000373547.9	4103	7	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_2	12.6809130410848	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGCTTGACTGGTGA	-125185295	True	NA	-1	True	ATTAAA	-18	NA	125189803	125146572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125149922_125153532_125153743_125153905_125153986_125158240_125158383_125160840_125160907_125171084_125171181_125189643
transcript_143435.known	chr9	+	1537	10	FSM	ENSG00000136933.17	ENST00000628863.2	1537	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	118.064117336594	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220326_125220398_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_143438.known	chr9	+	1466	9	FSM	ENSG00000136933.17	ENST00000394125.8	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	79.9730423330262	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_143443.nnic	chr9	+	1172	8	NIC	ENSG00000136933.17	novel	1466	9	NA	NA	-26	-158	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	112.411779468458	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	NA	False	NA	15	True	AATAAA	-17	NA	125200515	125234000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125213369_125213523_125227909_125228060_125232595_125232746_125233687
transcript_143444.known	chr9	+	1313	8	FSM	ENSG00000136933.17	ENST00000259460.12	1313	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	109.263022854328	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCTCTTGGGAATGACTT	125197137	True	NA	138	True	ACTAAA	-20	NA	125200541	125234158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125220538_125220701_125227909_125228060_125232595_125232746_125233687
transcript_143450.nnic	chr9	+	1019	7	NIC	ENSG00000136933.17	novel	1313	8	NA	NA	-26	-158	combination_of_known_splicesites	FALSE	canonical	3	30	junction_4	116.936473732061	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCAGTTACTTTCAGAA	NA	False	NA	15	True	AATAAA	-17	NA	125200515	125234000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_125200578_125200779_125200907_125203007_125203067_125207563_125207722_125227909_125228060_125232595_125232746_125233687
transcript_143461.known	chr9	-	3921	8	FSM	ENSG00000044574.9	ENST00000324460.7	3921	8	0	0	0	0	multi-exon	FALSE	canonical	3	5278	junction_5	421.681618943845	3586	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTGTCTGATGTCTATA	-125160052	True	NA	-27	True	ATTAAA	-15	NA	125241343	125234852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125237155_125238140_125238309_125238589_125238828_125238940_125239332_125239420_125239534_125240171_125240310_125240675_125240908_125241004
transcript_143463.known	chr9	-	3369	12	FSM	ENSG00000119487.17	ENST00000265960.8	3369	12	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	172.37610234936	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690175	True	NA	NA	False	AATAAA	-18	NA	125707208	125437393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_143464.known	chr9	-	3045	11	FSM	ENSG00000119487.17	ENST00000373503.7	3045	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	273.449465166784	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690179	True	NA	NA	False	AATAAA	-18	NA	125707212	125437393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125706970
transcript_143467.known	chr9	-	3256	11	FSM	ENSG00000119487.17	ENST00000350766.7	3256	11	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_4	143.058589396093	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGCATATTGTGTTGAG	-125690170	True	NA	NA	False	AATAAA	-18	NA	125707203	125437393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125484442_125484584_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_143469.known	chr9	-	3252	11	FSM	ENSG00000119487.17	ENST00000373511.6	3252	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	267.553658169721	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATATTGTGTTGAGT	-125690198	True	NA	NA	False	AATAAA	-19	NA	125707231	125437392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125439013_125444500_125444599_125467971_125468110_125506309_125506418_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_143482.known	chr9	-	1586	8	FSM	ENSG00000119487.17	ENST00000394060.7	1586	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	291.225909926031	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-125690198	True	NA	2	True	AATAAA	-22	NA	125707231	125521467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125669817_125669908_125672315_125672644_125706970
transcript_143485.nic	chr9	-	1160	6	NIC	ENSG00000119487.17	novel	1586	8	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_1	379.971893697415	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTGTATTTCTTTACAG	-125690190	True	NA	2	True	AATAAA	-22	NA	125707223	125521467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_125521766_125543058_125543169_125559632_125559810_125585554_125585728_125657650_125657800_125706970
transcript_143490.known	chr9	+	2840	9	FSM	ENSG00000167081.18	ENST00000373489.10	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_6	34.8532638356869	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125746969	True	NA	NA	False	AATAAA	-22	NA	125747372	125967377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_143491.known	chr9	+	2755	8	FSM	ENSG00000167081.18	ENST00000342287.9	2755	8	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	33.5978619339179	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGATGCAGTTTCTTACT	125747330	False	NA	NA	False	AATAAA	-22	NA	125747344	125967377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125747654_125748549_125748624_125915685_125915928_125929654_125929846_125935471_125935608_125960683_125960850_125963011_125963102_125965830
transcript_143493.known	chr9	+	1130	8	FSM	ENSG00000167081.18	ENST00000373482.6	1130	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	54.9151479046333	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGCGTTTTTGTAGCCCA	125747050	False	NA	NA	False	NA	NA	NA	125747453	125965990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_125747654_125748549_125748624_125929654_125929846_125935471_125935608_125960683_125960850_125962101_125962215_125963011_125963102_125965830
transcript_143494.known	chr9	+	421	3	FSM	ENSG00000196814.15	ENST00000470567.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTCTATTCTTATGGT	NA	False	NA	NA	False	ATTAAA	-19	NA	126395639	126448409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126395698_126421853_126421949_126448141
transcript_143495.known	chr9	+	5940	3	FSM	ENSG00000169155.10	ENST00000373464.5	5940	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTTTTCACTATGAG	126803354	True	NA	13	True	AATAAA	-24	NA	126805039	126838210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126805133_126808792_126808916_126832486
transcript_143496.known	chr9	+	710	2	FSM	ENSG00000169155.10	ENST00000450858.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAACTCGTCCACAGAGC	126803347	True	NA	78	True	NA	NA	NA	126805032	126833096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126805133_126832486
transcript_143498.nnic	chr9	+	452	3	NNC	ENSG00000177125.5	novel	6564	2	NA	NA	8	-6222	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	11	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGTTGCTTTCTTTTTGTT	126858652	True	NA	NA	False	ATTAAA	-18	NA	126860672	126879653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_126860740_126863591_126863713_126879389
transcript_143499.known	chr9	+	6564	2	FSM	ENSG00000177125.5	ENST00000319119.4	6564	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTGGTCTCCCTCTG	126858644	True	NA	33	True	AATAAA	-18	NA	126860664	126885878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_126860740_126879389
transcript_1435.nnic	chr1	-	829	6	ISM	ENSG00000007923.17	ENST00000685129.1	3555	15	-68	18972	34	-242	5prime_fragment	FALSE	canonical	1	2	junction_1	379.357140436291	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCCTCGTGGTCACAT	-6679184	True	NA	NA	False	ATTAAA	-15	NA	6701890	6653155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_6653388_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_143505.known	chr9	-	3443	5	FSM	ENSG00000136859.10	ENST00000373425.8	3443	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	2.1650635094611	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGATGTATCTACACTCT	-127121657	True	NA	-15	True	AATAAA	-15	NA	127122635	127087347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127089139_127091669_127091941_127093732_127093927_127107914_127108781_127122314
transcript_143512.nnic	chr9	+	642	3	NNC	ENSG00000136895.19	novel	536	5	NA	NA	-18	-74064	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTCACATAGTAGCCAA	127224239	True	NA	NA	False	AATAAA	-20	NA	127224607	127237612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_127224692_127235793_127235892_127237152
transcript_143517.known	chr9	+	628	1	FSM	ENSG00000271833.1	ENST00000607259.1	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGTGGAGGAATTTTT	NA	False	NA	5	True	AATAAA	-18	NA	127366769	127367397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127366800_127367400
transcript_143518.known	chr9	+	1763	8	FSM	ENSG00000136856.18	ENST00000610552.4	1763	8	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	78.3341872872833	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAACAGCAAAAAA	127394546	True	NA	NA	False	NA	NA	NA	127397137	127407855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127397287_127399906_127400007_127402556_127402754_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_143525.known	chr9	+	914	7	FSM	ENSG00000136856.18	ENST00000373352.5	914	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	110.67921615592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCCAAGCCCAGAGCCC	127394634	True	NA	NA	False	NA	NA	NA	127397225	127407291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127397287_127399906_127400007_127403659_127403804_127403958_127404068_127404817_127404992_127405419_127405566_127407111
transcript_14353.nic	chr1	+	1389	8	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	35413	-40	13968	5prime_fragment	FALSE	canonical	3	177	junction_2	24.8103006916112	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTTTCAAGAGGTAAGGT	214591351	True	NA	38	True	AAAAAG	-5	NA	214603154	214629158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045
transcript_143531.known	chr9	+	2194	6	FSM	ENSG00000196152.10	ENST00000543471.5	2194	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	13.7171425595858	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423591	True	NA	10	True	AATAAA	-23	NA	127424373	127445371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127424804_127428551_127428661_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_143533.known	chr9	+	2192	5	FSM	ENSG00000196152.10	ENST00000612342.4	2192	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	12.3768937944866	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGACGCTCAGCTCTCC	127423591	True	NA	10	True	AATAAA	-23	NA	127424373	127445371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127424911_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_143534.known	chr9	+	2078	5	FSM	ENSG00000196152.10	ENST00000342483.5	2078	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	11.5190060335083	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGACGCTCAGCTCTCCA	127423599	True	NA	11	True	AATAAA	-24	NA	127424381	127445372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127424804_127428831_127428921_127435089_127435217_127435907_127436004_127444028
transcript_143536.known	chr9	-	634	7	FSM	ENSG00000197958.13	ENST00000361436.10	634	7	0	0	0	0	multi-exon	FALSE	canonical	3	3600	junction_1	2119.74490734669	147194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-127372244	True	NA	-5	True	AATAAA	-23	NA	127451406	127447673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451280
transcript_143539.known	chr9	-	864	7	FSM	ENSG00000197958.13	ENST00000497825.5	864	7	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	3616.3224260136	8940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTGTGGCGTCTTC	-127372243	True	NA	-5	True	AATAAA	-23	NA	127451405	127447673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127449609_127449709_127450730_127450805_127451049
transcript_143567.known	chr9	-	499	6	FSM	ENSG00000197958.13	ENST00000536368.1	499	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_4	3708.79912640197	5311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTTCTGGTGTGGCGTC	-127372211	True	NA	-8	True	AATAAA	-20	NA	127451373	127447676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447727_127447876_127447990_127448336_127448424_127449280_127449363_127450730_127450805_127451280
transcript_143568.known	chr9	-	2275	4	FSM	ENSG00000197958.13	ENST00000497322.1	2275	4	0	0	0	0	multi-exon	FALSE	canonical	3	9090	junction_3	303.930182041132	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGATTTTCTGGTGTGGC	-127372243	True	NA	-11	True	AATAAA	-17	NA	127451405	127447679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127447990_127448336_127448424_127449280_127449363_127449609
transcript_143569.known	chr9	+	3120	26	FSM	ENSG00000148356.15	ENST00000300417.11	3120	26	0	0	0	0	multi-exon	TRUE	canonical	3	117	junction_1	23.245679168396	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449880	True	NA	19	True	AATAAA	-16	NA	127451509	127503499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127451670_127451928_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_14357.nic	chr1	+	718	5	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	45414	-40	3967	5prime_fragment	FALSE	canonical	3	177	junction_2	24.5916652547159	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAGAGGTTGAAGA	214591351	True	NA	27	True	AAGAAA	-3	NA	214603154	214619157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128
transcript_143570.known	chr9	+	3376	25	FSM	ENSG00000148356.15	ENST00000323301.8	3376	25	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.0771977238173	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGGCCTGAGTCATCAC	127449883	True	NA	19	True	AATAAA	-16	NA	127451512	127503499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495319_127495419_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_143573.known	chr9	+	3261	24	FSM	ENSG00000148356.15	ENST00000675141.1	3261	24	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_20	39.0826761693662	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTCAGTGCGCTTCTG	127449885	True	NA	5	True	AATAAA	-2	NA	127451514	127503485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127452085_127454495_127454600_127454997_127455055_127455575_127455621_127457315_127457394_127459002_127459072_127461172_127461258_127462251_127462374_127467739_127467831_127473800_127473932_127478933_127478964_127479382_127479506_127479838_127479979_127481182_127481228_127482949_127483021_127485735_127485836_127487675_127487764_127489443_127489519_127491214_127491296_127492801_127492898_127495963_127496096_127497252_127497335_127501009_127501144_127502773
transcript_143577.known	chr9	+	3754	19	FSM	ENSG00000136854.24	ENST00000373299.5	3754	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_8	17.4674300087652	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGGTGTCCAGGGGGCTC	127609321	True	NA	7	True	AATAAA	-20	NA	127612276	127692699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204_127663354_127665246_127665332_127666165_127666297_127668079_127668188_127669897_127669959_127672050_127672117_127673180_127673262_127675803_127675943_127676643_127676754_127678430_127678533_127680156_127680243_127682405_127682561_127690774
transcript_143579.nic	chr9	+	954	7	ISM	ENSG00000136854.24	ENST00000373302.8	3880	20	-12	29109	0	-132	5prime_fragment	FALSE	canonical	3	137	junction_6	11.5181016954473	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAACCTCTATGTAACTG	127609309	True	NA	NA	False	CATAAA	-22	NA	127612264	127663590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_127612441_127651602_127651653_127653714_127653797_127658374_127658452_127660029_127660109_127661101_127661206_127663204
transcript_143582.known	chr9	+	566	2	FSM	ENSG00000136854.24	ENST00000476182.3	566	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTTTCCAATGATTCT	127609405	False	NA	8	True	AATAAA	-15	NA	127612360	127613751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127612441_127613265
transcript_143584.known	chr9	-	962	5	FSM	ENSG00000187024.15	ENST00000543175.5	962	5	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_3	7.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGGTGCAGTGGCTCAC	-127714086	True	NA	NA	False	ATTAAA	-15	NA	127715663	127713806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127714283_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_143589.known	chr9	-	569	4	FSM	ENSG00000187024.15	ENST00000414832.2	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	63.4052223576436	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCCCACCAACCCAGCCAC	-127714054	True	NA	NA	False	NA	NA	NA	127715631	127714067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127714283_127714378_127714425_127714974_127715195_127715543
transcript_143590.nic	chr9	-	1489	4	ISM	ENSG00000160404.18	ENST00000373284.10	1500	5	566	0	547	0	3prime_fragment	FALSE	canonical	3	64	junction_3	6.64997911442	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTTGCTAAGACTTTT	-127733674	False	NA	-8	True	AATAAA	-19	NA	127734728	127731523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127732279_127732563_127732692_127733384_127733561_127734298
transcript_143594.known	chr9	-	759	3	FSM	ENSG00000187024.15	ENST00000335223.5	759	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAAGAAAAGCATTC	-127714070	True	NA	NA	False	NA	NA	NA	127715647	127692977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127693309_127694926_127695142_127715434
transcript_143597.known	chr9	-	645	5	FSM	ENSG00000187024.15	ENST00000456267.5	645	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	54.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGTGGGGGTGACT	-127714027	True	NA	-47	True	NA	NA	NA	127715604	127713971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127714190_127714378_127714425_127714602_127714703_127714974_127715195_127715543
transcript_1436.nnic	chr1	-	803	6	NNC	ENSG00000007923.17	novel	3555	15	NA	NA	-13	-242	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	377.789571057752	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTACCCTCGTGGTCACAT	-6679130	True	NA	NA	False	ATTAAA	-15	NA	6701836	6653155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_6653416_6653910_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_14360.nic	chr1	+	691	4	ISM	ENSG00000117724.14	ENST00000366955.8	10290	20	-40	45875	-40	3506	5prime_fragment	FALSE	canonical	3	177	junction_2	27.8248490062789	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCATTTTCTTCCTTGGT	214591351	True	NA	9	True	NA	NA	NA	214603154	214618696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572
transcript_143600.nic	chr9	-	1120	4	ISM	ENSG00000095370.20	ENST00000420366.5	2682	10	13320	0	2736	0	3prime_fragment	TRUE	canonical	2	6	junction_3	6.64997911442	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTCTCTCGGGCTCCT	NA	False	NA	-1	True	AATAAA	-16	NA	127741984	127738317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127738922_127739681_127739889_127740257_127740370_127741787
transcript_143602.known	chr9	+	2483	7	FSM	ENSG00000136807.14	ENST00000373264.5	2483	7	0	0	0	0	multi-exon	FALSE	canonical	3	879	junction_5	61.170299619632	215	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTGGAG	127777373	True	NA	NA	False	AGTAAA	-16	NA	127786033	127790792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127786241_127786700_127786783_127787517_127787609_127787946_127788114_127788213_127788386_127788543_127788693_127789177
transcript_143608.known	chr9	+	560	3	FSM	ENSG00000136877.15	ENST00000475270.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_2	8	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGCTGGAGCCCGCACT	127809948	True	NA	NA	False	NA	NA	NA	127809993	127813574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_127810107_127810944_127811012_127813194
transcript_143609.nic	chr9	+	431	2	ISM	ENSG00000136877.15	ENST00000467826.5	829	8	4928	-179	3198	179	3prime_fragment	FALSE	canonical	3	24	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGCGCATGCCTGTA	127813176	False	NA	4	True	AATACA	-17	NA	127813191	127814506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_127813324_127814207
transcript_143610.nnic	chr9	-	2086	11	NNC	ENSG00000106991.14	novel	2946	15	NA	NA	-1177	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_10	7.1281133548787	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGGGTTGGGCTGGGAG	-127825565	False	17	-3	True	AATAAA	-17	NA	127825582	127815015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127815807_127815942_127816054_127817148_127817204_127818119_127818378_127818715_127818833_127819621_127819661_127819899_127820038_127824303_127824447_127824799_127824975_127825230_127825358_127825450
transcript_143614.known	chr9	-	1947	13	FSM	ENSG00000257524.6	ENST00000646171.1	1947	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	131.708933089429	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCACTAAAGGAATTTCTAA	-127896626	True	NA	-43	True	NA	NA	NA	127899591	127867863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127885185_127885344_127886635_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_143618.known	chr9	-	2192	7	FSM	ENSG00000106992.19	ENST00000644144.2	2192	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	17.1310309737103	756	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTGAATCTATTGAAAGAAG	-127875280	True	NA	NA	False	AATAAA	-19	NA	127877675	127866485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127868077_127868320_127868513_127871822_127871940_127872689_127872854_127873025_127873062_127874610_127874650_127877622
transcript_14362.known	chr1	+	689	3	FSM	ENSG00000117724.14	ENST00000464322.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	30	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAACAAACAAACAGTG	214591391	True	NA	NA	False	NA	NA	NA	214603194	214615190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214603322_214613713_214613917_214614831
transcript_143623.known	chr9	-	2357	7	FSM	ENSG00000160408.16	ENST00000291839.10	2357	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	126.399828586382	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCTTCGTGTCCTGTGT	-127896609	True	NA	-15	True	AATAAA	-12	NA	127899574	127885325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127890655_127891044_127894511_127894692_127896241_127896333_127897955_127898011_127899502
transcript_143627.known	chr9	-	2424	6	FSM	ENSG00000160408.16	ENST00000373141.5	2424	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	148.700504370362	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127894443	False	NA	-11	True	AATAAA	-16	NA	127897408	127885321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127897237
transcript_143628.known	chr9	-	2406	6	FSM	ENSG00000160408.16	ENST00000373144.7	2406	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	85.5789693791646	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCGTGTCCTGTGTCACC	-127896690	True	NA	-11	True	AATAAA	-16	NA	127899655	127885321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127886789_127887483_127887592_127890636_127891044_127894511_127894692_127896241_127896333_127899502
transcript_143634.known	chr9	-	452	4	FSM	ENSG00000160408.16	ENST00000478319.5	452	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	179.113247850503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCACTGACGGCTATGTCC	-127896570	True	NA	NA	False	NA	NA	NA	127899535	127894548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127894692_127896241_127896333_127897825_127898011_127899502
transcript_143635.nic	chr9	-	650	4	ISM	ENSG00000160408.16	ENST00000291839.10	2357	7	-6	8940	-6	256	5prime_fragment	FALSE	canonical	3	189	junction_2	117.303973599458	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTTCACTGCTCTC	-127896615	True	NA	-11	True	NA	NA	NA	127899580	127894265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127894692_127896241_127896333_127897955_127898011_127899502
transcript_143645.nnic	chr9	-	1479	6	NNC	ENSG00000136840.19	novel	1706	6	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	56.9301326188513	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915085	True	NA	-10	True	NA	NA	NA	127917050	127907885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127908169_127908317_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_14365.known	chr1	+	10290	20	FSM	ENSG00000117724.14	ENST00000366955.8	10290	20	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_11	106.127660543376	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGATTCCTAAGTGTAAA	214591391	True	NA	27	True	AATAAA	-24	NA	214603194	214664571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_214603322_214613713_214613917_214614831_214615029_214618572_214618695_214619128_214619221_214620654_214620947_214622078_214622282_214629045_214629172_214630533_214630663_214632479_214632603_214637865_214638002_214639920_214643325_214644556_214647401_214648674_214648828_214651709_214651887_214652827_214652990_214655240_214655404_214656932_214657410_214658849_214659029_214663590
transcript_143650.known	chr9	-	1013	5	FSM	ENSG00000136840.19	ENST00000361444.3	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	46.5778917513449	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGCCAAGAAGAGGCCCA	-127915031	True	NA	NA	False	NA	NA	NA	127916996	127908446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916825
transcript_143652.known	chr9	-	1706	6	FSM	ENSG00000136840.19	ENST00000335791.10	1706	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	10.2254584249314	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTCTCTAGCGTGGTCA	-127915076	True	NA	-10	True	NA	NA	NA	127917041	127907885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127908582_127909950_127910059_127912267_127912681_127914655_127914842_127916407_127916495_127916825
transcript_143657.known	chr9	-	2176	10	FSM	ENSG00000167103.12	ENST00000388747.9	2176	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	27.177514307799	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127924431	False	6346	-6	True	ATTAAA	-19	NA	127930777	127920880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296_127927332_127927647_127927773_127928064_127928220_127928432_127928484_127929687_127929886_127930722
transcript_14366.known	chr1	+	4019	18	FSM	ENSG00000136636.13	ENST00000259154.9	4019	18	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	36.2925445364104	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTTTTCAGTTATTTAAG	215561106	True	NA	18	True	AATAAA	-15	NA	215567303	215621807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_215567769_215573785_215573840_215574072_215574119_215575900_215575975_215577669_215577729_215578000_215578082_215578999_215579138_215579908_215580000_215586494_215586686_215595355_215595472_215601866_215601955_215602084_215602202_215604131_215604303_215608016_215608173_215611824_215611922_215618885_215619071_215619152_215619292_215620056
transcript_143676.nnic	chr9	-	1177	5	NNC	ENSG00000167103.12	novel	2176	10	NA	NA	31	0	intron_retention	FALSE	canonical	2	4	junction_1	29.2777646004609	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127926660	True	NA	-6	True	ATTAAA	-19	NA	127927426	127920880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127921605_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_143677.nic	chr9	-	1658	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	11	junction_2	27.6439414700581	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127926660	True	NA	-6	True	ATTAAA	-19	NA	127927426	127920880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127922115_127925106_127925232_127925866_127925980_127927152_127927209_127927296
transcript_143680.known	chr9	-	1104	5	FSM	ENSG00000167103.12	ENST00000300432.3	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	17.5926120857592	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	-127926725	True	NA	-5	True	AATAAA	-20	NA	127927491	127921528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127922115_127925106_127925261_127925866_127925980_127927152_127927209_127927296
transcript_143681.nic	chr9	-	1596	5	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	31	0	intron_retention	FALSE	canonical	3	9	junction_2	28.4725745235657	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127926660	True	NA	-6	True	ATTAAA	-19	NA	127927426	127920880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
transcript_143689.nic	chr9	-	997	5	NIC	ENSG00000167103.12	novel	1104	5	NA	NA	16	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	28.4725745235657	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGGCTTTTGGATTCCGG	-127926709	True	NA	-5	True	AATAAA	-20	NA	127927475	127921528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127922115_127925106_127925261_127925957_127925980_127927152_127927209_127927296
transcript_143690.nnic	chr9	-	1025	4	NNC	ENSG00000167103.12	novel	1104	5	NA	NA	31	2	intron_retention	FALSE	canonical	0	0	junction_1	34.9888871246603	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACAGGCCCTCTGCTGG	-127926660	True	NA	-4	True	ATTAAA	-21	NA	127927426	127920878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_127921605_127925866_127925980_127927152_127927209_127927296
transcript_143693.nic	chr9	-	1674	4	NIC	ENSG00000167103.12	novel	2176	10	NA	NA	-35	0	intron_retention	FALSE	canonical	3	12	junction_2	26.2339898266013	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGACAGGCCCTCTGCT	-127927452	False	NA	-6	True	ATTAAA	-19	NA	127927526	127920880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_127922115_127925106_127925261_127927152_127927209_127927296
transcript_143697.nic	chr9	-	689	4	ISM	ENSG00000167103.12	ENST00000476624.1	629	6	601	-53	-35	53	3prime_fragment	FALSE	canonical	2	3	junction_1	33.6286914537109	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGTTCAAATTCAGG	-127927452	False	NA	-1	True	AATAAA	-32	NA	127927526	127925442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127925824_127925957_127925980_127927152_127927209_127927296
transcript_143702.nic	chr9	-	823	3	ISM	ENSG00000167103.12	ENST00000497234.5	361	4	-69	239	-35	53	5prime_fragment	FALSE	canonical	3	60	junction_2	11.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCAGAGTTCAAATTCAGG	-127927452	False	NA	-1	True	AATAAA	-32	NA	127927526	127925442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_127925980_127927152_127927209_127927296
transcript_143715.known	chr9	-	912	4	FSM	ENSG00000136908.18	ENST00000314392.13	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_3	357.125561485966	4304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931508	True	NA	-6	True	AATAAA	-16	NA	127937854	127935098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127936552_127936656_127937433_127937524_127937817
transcript_143721.known	chr9	-	1662	3	FSM	ENSG00000136908.18	ENST00000495270.1	1662	3	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_2	416	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTGTGCCGTGTTTAC	-127931480	True	NA	-6	True	AATAAA	-16	NA	127937826	127935098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127936552_127937524_127937817
transcript_143724.known	chr9	-	928	3	FSM	ENSG00000136908.18	ENST00000470181.1	928	3	0	0	0	0	multi-exon	FALSE	canonical	3	1272	junction_2	91	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGACTTCTCTTCCTCC	-127931472	True	NA	NA	False	NA	NA	NA	127937818	127935340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_127935781_127936552_127936656_127937433
transcript_143725.known	chr9	+	3474	10	FSM	ENSG00000148339.13	ENST00000373064.9	3474	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	20.8599089755717	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGAGCCAGTATTTTTC	128098290	False	NA	12	True	AATAAA	-17	NA	128098303	128109245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128098726_128101095_128101223_128101308_128101397_128102369_128102482_128103680_128103840_128105728_128105882_128106149_128106258_128106352_128106521_128107028_128107180_128107259
transcript_143726.nic	chr9	-	1855	3	NIC	ENSG00000171169.9	novel	3398	2	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	18	junction_1	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066891	True	NA	-2	True	ATTAAA	-24	NA	128067324	128061232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128061827_128063373_128063901_128066590
transcript_143728.known	chr9	-	3398	2	FSM	ENSG00000171169.9	ENST00000373078.5	3398	2	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128066887	True	NA	-2	True	ATTAAA	-24	NA	128067320	128061232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128063901_128066590
transcript_143729.known	chr9	-	963	2	FSM	ENSG00000171169.9	ENST00000470245.1	963	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTGTGTCTTTATTGC	-128063695	False	NA	-2	True	ATTAAA	-24	NA	128063742	128061232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128061827_128063373
transcript_143731.known	chr9	-	1614	8	FSM	ENSG00000148334.16	ENST00000277462.9	1614	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	578.149475764296	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	-128128423	False	NA	-5	True	AATAAA	-41	NA	128128462	128120693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128124778_128124872_128125243_128125442_128128247
transcript_143732.known	chr9	-	1344	8	FSM	ENSG00000148334.16	ENST00000617202.4	1344	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	583.471804750474	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCCGTGTGGCTGAGTGC	-128128149	False	NA	-5	True	AATAAA	-41	NA	128128188	128120693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123848_128124491_128124551_128125243_128125284_128125375_128125442_128128054
transcript_143733.nic	chr9	-	1441	7	NIC	ENSG00000148334.16	novel	1344	8	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_2	565.241737862857	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128149	False	NA	-4	True	AATAAA	-42	NA	128128188	128120692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128054
transcript_143734.nnic	chr9	-	1635	7	NNC	ENSG00000148334.16	novel	1598	7	NA	NA	5	0	intron_retention	FALSE	canonical	0	0	junction_2	557.382473910171	169	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128351	False	NA	-4	True	AATAAA	-42	NA	128128390	128120692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128062
transcript_143735.nic	chr9	-	1536	7	NIC	ENSG00000148334.16	novel	1614	8	NA	NA	-14	0	intron_retention	FALSE	canonical	0	0	junction_2	560.136193756086	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCGTGTGGCTGAGTGCT	-128128437	False	NA	-4	True	AATAAA	-42	NA	128128476	128120692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_128121274_128122361_128122480_128122933_128123135_128123701_128123852_128124491_128124551_128125243_128125442_128128247
transcript_143738.known	chr9	+	2100	1	FSM	ENSG00000232850.3	ENST00000443493.3	2100	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAAGCCTGACCATGCTA	128128511	True	NA	NA	False	AATAAA	-22	NA	128128528	128130628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128128500_128130600
transcript_143739.nnic	chr9	+	804	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-708	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	5.38887743412299	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	128150618	True	NA	6	True	AATAAA	-15	NA	128150791	128153453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128151124_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_143740.nnic	chr9	+	594	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-699	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8.06473806146238	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	128150627	True	NA	6	True	AATAAA	-15	NA	128150800	128153453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128150923_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_143741.nnic	chr9	+	662	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-697	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.89915248150105	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	128150629	True	NA	6	True	AATAAA	-15	NA	128150802	128153453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128150993_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_143742.nnic	chr9	+	877	6	NNC	ENSG00000148346.12	novel	485	5	NA	NA	-662	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.74985714169094	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGAGTCTACACTGTTT	128150664	True	NA	6	True	AATAAA	-15	NA	128150837	128153453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128151243_128151637_128151718_128151905_128152026_128152182_128152285_128153099_128153127_128153310
transcript_14375.nnic	chr1	+	636	2	Antisense	novelGene_ENSG00000042781.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	216008306	True	NA	12	True	AATAAA	-22	NA	216008447	216013833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_216008702_216013451
transcript_143750.known	chr9	-	1996	4	FSM	ENSG00000148337.22	ENST00000634501.1	1996	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGTATCACAAGGTCAAGAG	-128204187	True	NA	NA	False	NA	NA	NA	128204222	128196846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128198368_128199919_128200185_128202763_128202937_128204185
transcript_143753.known	chr9	+	434	3	FSM	ENSG00000171159.5	ENST00000486420.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCCTGGGCCACCCTTC	128160447	False	NA	NA	False	NA	NA	NA	128160459	128163737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128160487_128162003_128162116_128163442
transcript_143754.known	chr9	+	1570	3	FSM	ENSG00000171159.5	ENST00000492588.1	1570	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTGAGTGTCCACATTAA	128152193	True	NA	-20	True	NA	NA	NA	128160313	128163890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128160487_128162003_128162953_128163442
transcript_143758.known	chr9	+	704	2	FSM	ENSG00000171159.5	ENST00000372994.2	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	0	4882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCTGTGCCTCTCTCCTCT	128152144	True	NA	14	True	ATTAAA	-14	NA	128160264	128163924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128160487_128163442
transcript_143767.known	chr9	+	466	5	FSM	ENSG00000175854.14	ENST00000495313.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	78.4932321923362	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCACAGCTCCCAGGGAC	NA	False	NA	NA	False	NA	NA	NA	128275378	128288733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128275497_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_143769.known	chr9	+	763	5	FSM	ENSG00000175854.14	ENST00000418976.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	17.4266319178434	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCTTCTCCAATAGCC	128273272	True	NA	17	True	AATAAA	-17	NA	128276243	128288989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128276403_128276706_128276756_128284509_128284632_128285938_128286034_128288651
transcript_143772.known	chr9	+	906	5	FSM	ENSG00000175854.14	ENST00000608796.6	906	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	68.1189217471915	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCTTCTCCAATAGCCC	128276206	False	NA	18	True	AATAAA	-18	NA	128276221	128288990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938_128286034_128288651
transcript_143775.known	chr9	+	1048	4	FSM	ENSG00000175854.14	ENST00000419867.7	1048	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	72.3617455719679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTACAAACCCTTCAGTT	128273270	True	NA	NA	False	NA	NA	NA	128276241	128286534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128276403_128276586_128276756_128284509_128284632_128285938
transcript_143781.known	chr9	-	428	2	FSM	ENSG00000167110.19	ENST00000490628.3	462	2	34	0	8	0	multi-exon	FALSE	canonical	3	115	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAGTTTAAATGAGA	-128272317	True	NA	-12	True	TATAAA	-18	NA	128275987	128273639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128273973_128275892
transcript_143782.known	chr9	-	5426	8	FSM	ENSG00000167112.10	ENST00000372890.6	5426	8	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	38.9389894316633	693	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTTGCTCATTGTCTTT	-128318798	True	NA	-26	True	ATTAAA	-7	NA	128322447	128305158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128309876_128310886_128311024_128311528_128311602_128313807_128313890_128315566_128315629_128317151_128317227_128321598_128321731_128322299
transcript_143783.known	chr9	+	1245	7	FSM	ENSG00000167113.11	ENST00000300452.8	1245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	55.8271140814808	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTCTGCTTGTCCTCCTTT	128321392	True	NA	12	True	AATAAA	-18	NA	128322838	128334072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128322929_128323015_128323148_128325142_128325240_128325778_128325882_128332152_128332283_128332849_128332944_128333473
transcript_143795.known	chr9	+	781	3	FSM	ENSG00000167113.11	ENST00000608951.5	781	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTAGGGTTCTACAGTG	128322475	False	NA	8	True	AATAAA	-25	NA	128322581	128323584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128322929_128323015_128323148_128323282
transcript_143797.known	chr9	+	956	2	FSM	ENSG00000167113.11	ENST00000609948.1	956	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGGTTCTACAGTGTT	128322520	False	NA	10	True	AATAAA	-27	NA	128322543	128323586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128322929_128323015
transcript_1438.known	chr1	-	613	5	FSM	ENSG00000007923.17	ENST00000485073.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_1	84.7861279927324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATTTATGAAAGGATGC	-6679098	True	NA	NA	False	NA	NA	NA	6701804	6653808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6654040_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_14380.known	chr1	-	5859	10	FSM	ENSG00000092978.11	ENST00000366935.8	5859	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	19.8270298106174	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTAAAGTTGTCAAAAT	-217628827	True	NA	NA	False	ATTAAA	-22	NA	217631090	217426991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_217431366_217449248_217449338_217491679_217491751_217498355_217498396_217514821_217514890_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_143800.known	chr9	+	3229	13	FSM	ENSG00000167114.13	ENST00000300456.5	3229	13	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_6	13.6554832291729	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGTCACTCTAAGTGTG	128340019	True	NA	7	True	NA	NA	NA	128340526	128361470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128340839_128343126_128343294_128345154_128345550_128348544_128348704_128350311_128350382_128350483_128350576_128352637_128352748_128353024_128353235_128353414_128353542_128355052_128355191_128355397_128355563_128355649_128355797_128360333
transcript_143803.known	chr9	+	618	1	FSM	ENSG00000223551.1	ENST00000323496.5	618	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22915	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGAACACGTCTCACTAC	128342133	False	NA	0	True	AATAAA	-22	NA	128342152	128342770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128342200_128342800
transcript_143806.known	chr9	+	723	5	FSM	ENSG00000167118.11	ENST00000470840.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	238.022582962205	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCAGCCCCAGAGCCAG	128363555	True	NA	NA	False	NA	NA	NA	128371360	128390090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128377994_128378107_128387815_128387898_128389260_128389310_128389665
transcript_143810.known	chr9	+	753	3	FSM	ENSG00000167118.11	ENST00000372847.1	753	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	295	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCAGTGCAGTCTCCTT	128363565	True	NA	NA	False	NA	NA	NA	128371370	128388411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128377994_128378107_128387815
transcript_143812.known	chr9	+	2595	5	FSM	ENSG00000167118.11	ENST00000372853.9	2595	5	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	34.237223894469	1631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTTCTTTAATGAAAAG	128363568	True	NA	14	True	AATAAA	-26	NA	128371373	128392016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128378035_128378107_128387815_128387898_128389260_128389310_128389665
transcript_143813.known	chr9	+	3045	3	FSM	ENSG00000167118.11	ENST00000372850.5	3045	3	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_1	45.5	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGCTTGGAGCTTCATC	128363555	True	NA	18	True	AATAAA	-19	NA	128371360	128390734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128371416_128378035_128378107_128387815
transcript_143814.nnic	chr9	+	861	3	NIC	ENSG00000167123.20	novel	2308	13	NA	NA	-1817	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	31.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATATATGTATGTATATA	128428830	True	NA	NA	False	AATAAA	-19	NA	128428927	128437347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_128429037_128435652_128435906_128436848
transcript_143816.known	chr9	+	3899	21	FSM	ENSG00000136811.17	ENST00000444119.7	3791	21	-76	-32	0	0	multi-exon	FALSE	canonical	3	70	junction_4	16.6826256926181	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCGTACTGTGCTA	NA	False	NA	35	True	NA	NA	NA	128456005	128501292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128456256_128459566_128459658_128460512_128460667_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509_128494669_128496040_128496142_128498412_128498576_128499000_128499127_128500066
transcript_143823.known	chr9	+	2249	16	FSM	ENSG00000136811.17	ENST00000372814.7	2249	16	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	27.1825107171668	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTGTTTGCACAAAGTGA	NA	False	NA	11	True	AATAAA	-20	NA	128456056	128494839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128456256_128459566_128459658_128460941_128461068_128469182_128469354_128471307_128471469_128472912_128473043_128473609_128473742_128481579_128481652_128482815_128482888_128483937_128484055_128484700_128484887_128485364_128485475_128487889_128488026_128492425_128492537_128492700_128492806_128494509
transcript_143834.nic	chr9	+	505	2	ISM	ENSG00000136811.17	ENST00000448249.8	2069	16	-47	34908	9	-1448	5prime_fragment	FALSE	canonical	3	84	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGAAAAAAAAAGTTTA	128454212	True	NA	NA	False	AATAAA	-13	NA	128456109	128459925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_128456256_128459566
transcript_143835.known	chr9	+	3600	17	FSM	ENSG00000119392.16	ENST00000683288.1	3600	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	42.9105173588014	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTATCTAGCAAGAGAT	128502636	True	NA	NA	False	NA	NA	NA	128504736	128542479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128507215_128507341_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_143837.known	chr9	+	3302	16	FSM	ENSG00000119392.16	ENST00000309971.9	3302	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.8715407977128	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTGCTGATATATTGGT	128502618	True	NA	17	True	AATAAA	-19	NA	128504718	128542288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615_128539699_128540274_128540339_128541101
transcript_14384.known	chr1	-	3218	6	FSM	ENSG00000092978.11	ENST00000366934.3	3218	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	12.9089116504839	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-217628819	True	NA	-7	True	AATAAA	-27	NA	217631082	217608183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_217610193_217610320_217610401_217610888_217611072_217614140_217614203_217619782_217620500_217630915
transcript_143840.known	chr9	+	3217	15	FSM	ENSG00000119392.16	ENST00000684314.1	3217	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	39.4280538268303	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCCATTGCTGATATATTG	128502596	True	NA	15	True	AATAAA	-17	NA	128504696	128542286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128539615_128539699_128540274_128540339_128541101
transcript_143841.known	chr9	+	2218	14	FSM	ENSG00000119392.16	ENST00000372770.4	2218	14	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	16.7858069096921	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTCTGTCTTAAATAT	128502630	True	NA	NA	False	AATAAA	-17	NA	128504730	128539877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128504905_128508875_128509098_128515528_128515640_128522667_128522817_128523279_128523341_128523591_128523847_128525191_128525424_128527178_128527292_128527455_128527526_128533512_128533656_128533760_128533952_128536354_128536485_128537985_128538091_128539615
transcript_143843.known	chr9	-	822	4	FSM	ENSG00000228395.2	ENST00000434999.2	822	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCCATCCTAATAATTTGC	-128552369	True	NA	NA	False	AGTAAA	-19	NA	128552410	128528656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128529001_128536826_128536956_128543378_128543685_128552367
transcript_143847.known	chr9	+	351	2	FSM	ENSG00000197694.18	ENST00000497216.2	351	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTGATTTGCTTGTAAAT	128543278	True	NA	7	True	AATAAA	-19	NA	128552602	128553337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128552697_128553080
transcript_14385.nnic	chr1	-	3170	6	NNC	ENSG00000092978.11	novel	3218	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	21.0959711793508	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCAATTTGTGCTGCT	-217628841	True	NA	-7	True	AATAAA	-27	NA	217631104	217608183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_217610193_217610320_217610401_217610958_217611072_217614140_217614203_217619782_217620500_217630915
transcript_143850.known	chr9	+	2927	8	FSM	ENSG00000119335.18	ENST00000322030.13	2927	8	0	0	0	0	multi-exon	FALSE	canonical	3	4659	junction_1	683.221032749898	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGTCATTCTCCTTGTT	128642211	True	NA	19	True	AATAAA	-24	NA	128689221	128696396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128689656_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_143853.known	chr9	+	1029	8	FSM	ENSG00000119335.18	ENST00000372686.6	1043	8	14	0	14	0	multi-exon	FALSE	canonical	2	13	junction_1	2245.91717549505	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCCTTCCTGTCTGAAC	128689620	True	NA	33	True	AATACA	-43	NA	128689988	128694894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128690027_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_143858.known	chr9	+	2850	8	FSM	ENSG00000119335.18	ENST00000372692.8	2850	8	0	0	0	0	multi-exon	FALSE	canonical	3	1766	junction_1	1641.96654120874	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATTCTCCTTGTTTTAT	128683632	True	NA	23	True	AATAAA	-28	NA	128683654	128696400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128684008_128691169_128691228_128691857_128692001_128692661_128692766_128692867_128692982_128693637_128693809_128693895_128694043_128694640
transcript_143859.known	chr9	-	444	3	FSM	ENSG00000234705.3	ENST00000652876.2	463	3	16	3	16	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGAGAGGTTCAATCTGGA	-128684304	True	NA	NA	False	AATAAA	-18	NA	128684477	128663133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128663401_128663511_128663577_128684365
transcript_143860.known	chr9	+	3393	22	FSM	ENSG00000160447.7	ENST00000291906.5	3393	22	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.3129757102738	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTGGCAGCAGCCTGGG	128701880	True	NA	25	True	ATTAAA	-13	NA	128702502	128720916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128702940_128705302_128705544_128705733_128705880_128706712_128706825_128706895_128707024_128707221_128707406_128713051_128713199_128713277_128713388_128713498_128713643_128714045_128714122_128714196_128714366_128714561_128714665_128714797_128714866_128715171_128715236_128715368_128715461_128716746_128716924_128718324_128718388_128718548_128718626_128719685_128719829_128719909_128720018_128720202_128720284_128720393
transcript_143870.known	chr9	-	1146	5	FSM	ENSG00000160446.19	ENST00000372663.9	1146	5	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	55.8949908310217	2183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCATATCACTCCTTGC	-128717799	True	NA	-15	True	TATAAA	-22	NA	128724127	128720872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128721503_128721650_128721818_128722008_128722087_128722437_128722575_128723993
transcript_143871.known	chr9	-	4293	16	FSM	ENSG00000160445.11	ENST00000291900.7	4293	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_15	18.7434136580175	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGCGTCTTTTTTTGTGG	-128770674	True	NA	-1	True	AATACA	-21	NA	128771927	128729785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128731395_128733425_128733529_128735333_128735432_128739930_128740120_128740771_128740888_128741534_128741655_128741799_128741842_128742529_128742746_128750615_128750790_128751121_128751269_128751412_128751528_128752672_128752850_128753163_128753601_128753808_128753960_128755407_128755660_128771580
transcript_143876.nnic	chr9	+	842	4	NNC	ENSG00000223478.2	novel	559	2	NA	NA	-11	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	12.9700509722291	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723649	True	NA	8	True	AATAAA	-20	NA	128724423	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128729514_128729607_128730063_128730249_128732841
transcript_143879.nnic	chr9	+	451	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	-20	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	23	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723640	True	NA	8	True	AATAAA	-20	NA	128724414	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724483_128724605_128724636_128732841
transcript_143880.nnic	chr9	+	754	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	-15	-5	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	5.5	214	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723645	True	NA	8	True	AATAAA	-20	NA	128724419	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730063_128730249_128732841
transcript_143881.nnic	chr9	+	767	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	13.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723664	True	NA	8	True	AATAAA	-20	NA	128724438	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730031_128730249_128732841
transcript_143882.nnic	chr9	+	710	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	14	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723664	True	NA	8	True	AATAAA	-20	NA	128724438	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730088_128730249_128732841
transcript_143883.nnic	chr9	+	639	3	NNC	ENSG00000223478.2	novel	559	2	NA	NA	4	-5	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	11	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723664	True	NA	8	True	AATAAA	-20	NA	128724438	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_128724636_128730159_128730249_128732841
transcript_143885.known	chr9	+	544	2	FSM	ENSG00000223478.2	ENST00000443631.2	559	2	10	5	10	-5	multi-exon	FALSE	canonical	3	53	junction_1	0	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGGCCCTGATGCTCCGT	128723670	True	NA	8	True	AATAAA	-20	NA	128724444	128733194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128724636_128732841
transcript_143886.known	chr9	+	3855	12	FSM	ENSG00000107021.16	ENST00000372648.10	3855	12	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_9	22.3935498387407	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGGTGCTGTGATGAGCT	128783678	True	NA	28	True	AATAAA	-22	NA	128787252	128810430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128787377_128788333_128788408_128790734_128790776_128791379_128791442_128791593_128791694_128792491_128792575_128797054_128797215_128803249_128803461_128803955_128804120_128805858_128806020_128806253_128806312_128807813
transcript_143901.known	chr9	+	4334	4	FSM	ENSG00000136802.12	ENST00000372600.9	4334	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	21.7408984788271	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCCTTTGGAGGTCTTTG	128876362	True	NA	15	True	AATAAA	-15	NA	128882132	128918039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128882251_128886014_128886122_128907156_128909322_128916095
transcript_143902.known	chr9	-	4259	12	FSM	ENSG00000198917.13	ENST00000361256.10	4259	12	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	66.4205235632272	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCACTTGAATTATCCTGAA	-128822289	True	NA	-14	True	AATAAA	-17	NA	128829794	128819650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128822834_128823746_128823895_128824071_128824175_128824770_128824870_128824976_128825050_128826021_128826153_128826383_128826434_128826539_128826630_128827031_128827192_128828734_128828861_128829109_128829156_128829744
transcript_143903.known	chr9	-	898	3	FSM	ENSG00000198917.13	ENST00000467582.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	211	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAACGCTGCTAGGAGA	-128817317	False	NA	-40	True	NA	NA	NA	128824822	128822090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128822834_128824071_128824175_128824770
transcript_143904.known	chr9	-	1971	13	FSM	ENSG00000171097.14	ENST00000302586.8	1971	13	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_12	17.5760253375633	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879669	True	NA	-5	True	AATGAA	-15	NA	128881950	128832941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_143905.known	chr9	-	1623	12	FSM	ENSG00000171097.14	ENST00000320665.10	1623	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_9	54.3704769183661	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATTGACGGCTTCTCT	-128879648	True	NA	-6	True	AATAAA	-19	NA	128881929	128833118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836074_128836801_128836923_128837684_128837814_128838050_128838138_128842653_128842802_128845352_128845412_128881896
transcript_143906.known	chr9	-	2089	13	FSM	ENSG00000171097.14	ENST00000462722.5	2089	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	50.7074260395413	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTGTTGTTGTT	-128879755	True	NA	-5	True	AATGAA	-15	NA	128882036	128832941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128833644_128833739_128833827_128835322_128835403_128835480_128835668_128835778_128835869_128835996_128836106_128836801_128836923_128837684_128837814_128838050_128838138_128838217_128838368_128842653_128842802_128845352_128845412_128881896
transcript_143909.known	chr9	+	1599	12	FSM	ENSG00000175287.19	ENST00000308941.9	1599	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	31.3236899761029	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCCTACTGAGCCTTCT	128921364	True	NA	11	True	AATAAA	-18	NA	128921407	128942038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128921669_128921929_128922048_128922282_128922357_128927037_128927197_128933781_128933858_128934010_128934059_128936447_128936504_128936582_128936646_128940368_128940498_128940598_128940716_128941444_128941572_128941667
transcript_14391.nic	chr1	-	771	2	ISM	ENSG00000092978.11	ENST00000366934.3	3218	6	-22	11734	-14	-11734	5prime_fragment	FALSE	canonical	3	48	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATAATCAGACAAG	-217628841	True	NA	NA	False	AAAAAG	-4	NA	217631104	217619917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_217620500_217630915
transcript_143911.known	chr9	-	1365	12	FSM	ENSG00000148341.18	ENST00000372559.5	1365	12	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	163.764495289288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCTCCTGTCAGGGCC	-129025273	True	NA	-6	True	AATAAA	-21	NA	129028214	129008033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129008151_129008683_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_143913.known	chr9	-	3013	11	FSM	ENSG00000148341.18	ENST00000372564.8	3013	11	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_5	66.1589752036713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACAGAGTGTGGAAAACAGG	-129025390	True	NA	3	True	TATAAA	-29	NA	129028331	129007035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129008792_129009105_129009347_129009770_129009872_129010119_129010210_129010669_129010694_129012235_129012299_129014410_129014504_129014770_129014905_129021090_129021220_129022281_129022424_129028091
transcript_14392.nic	chr1	+	1416	11	NIC	ENSG00000162814.11	novel	5798	11	NA	NA	0	17	combination_of_known_junctions	TRUE	canonical	0	0	junction_8	1.7464249196573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAATTAATTATTGTG	217631231	True	NA	NA	False	AATAAA	-22	NA	217631323	217867150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_217631447_217648881_217648972_217651096_217651179_217669032_217669084_217683257_217683362_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217866877
transcript_143924.known	chr9	-	2074	1	FSM	ENSG00000175283.8	ENST00000372586.4	2074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	362	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAGTTTTGCTGATATA	-128945839	True	NA	-5	True	AATAAA	-17	NA	128947603	128945529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_128945500_128947600
transcript_143925.known	chr9	+	5689	44	FSM	ENSG00000095319.14	ENST00000372577.2	5689	44	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	80.0905247699327	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGATGTTTAACTTC	128934284	True	NA	32	True	ATTAAA	-17	NA	128947698	129007096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_128947752_128949188_128949244_128952772_128952847_128956349_128956435_128956951_128957033_128958009_128958055_128958801_128958895_128959014_128959135_128968505_128968718_128969399_128969515_128970757_128970959_128973159_128973250_128979261_128979328_128980605_128980726_128981263_128981391_128982548_128982702_128982901_128983029_128983292_128983381_128983473_128983551_128984899_128985015_128986557_128986679_128986808_128986876_128987588_128987718_128988046_128988187_128990119_128990227_128993196_128993404_128993524_128993695_128994372_128994443_128994855_128994924_128995318_128995515_128998150_128998229_128998537_128998624_128999171_128999318_128999623_128999806_129001528_129001730_129001883_129001977_129002816_129002976_129003316_129003455_129005146_129005222_129005302_129005531_129005644_129005777_129006049_129006124_129006238_129006369_129006501
transcript_143926.known	chr9	+	3610	16	FSM	ENSG00000148343.19	ENST00000684074.1	3610	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	25.9714373024589	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCATGTTGTTGGTTA	129034188	True	NA	17	True	AATAAA	-23	NA	129036625	129072082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129036682_129040451_129040691_129042303_129042515_129048426_129048540_129049380_129049499_129049826_129049964_129059153_129059272_129060549_129060651_129061230_129061347_129063243_129063317_129063544_129063632_129067772_129067872_129068197_129068333_129069075_129069130_129069848_129069966_129070246
transcript_14393.known	chr1	+	5798	11	FSM	ENSG00000162814.11	ENST00000366933.5	5798	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.79164728671689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGTCTCTGAGCTTAT	217631251	True	NA	NA	False	ATTAAA	-15	NA	217631343	217871696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_217631447_217648881_217648972_217651096_217651179_217669032_217669084_217683257_217683362_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217867021
transcript_143930.known	chr9	-	411	1	FSM	ENSG00000287234.1	ENST00000670830.1	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACGTCTATGCTACTTAA	-129080614	True	NA	-3	True	AATAAA	-15	NA	129080765	129080354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129080400_129080800
transcript_143931.known	chr9	+	2169	8	FSM	ENSG00000167130.18	ENST00000372546.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	14.4603610195709	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	129076255	True	NA	17	True	AATAAA	-17	NA	129081110	129090438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_143932.known	chr9	+	2037	7	FSM	ENSG00000167130.18	ENST00000406974.7	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	107.047367500975	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076255	True	NA	14	True	AATAAA	-14	NA	129081110	129090435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129081208_129084667_129084769_129085022_129085108_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_143934.nic	chr9	+	2096	7	NIC	ENSG00000167130.18	novel	2169	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	114.240122354432	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTGAGCACTTGCTGA	129076240	True	NA	14	True	AATAAA	-14	NA	129081095	129090435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_129081208_129084667_129084769_129085206_129085307_129085517_129085617_129086138_129086268_129086708_129086799_129088970
transcript_143935.known	chr9	+	1932	6	FSM	ENSG00000167130.18	ENST00000327812.12	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	148.134263423423	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAGCACTTGCTGATTG	129076278	True	NA	17	True	AATAAA	-17	NA	129081133	129090438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129081208_129084667_129084769_129085206_129085307_129085517_129085617_129086708_129086799_129088970
transcript_143936.nnic	chr9	+	1941	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	-4	-949	-4	1	multi-exon	FALSE	canonical	3	88	junction_1	338.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGAGGTATGTCTTTT	129138934	True	NA	26	True	ATTAAA	-23	NA	129139377	129148947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_143937.known	chr9	-	2768	14	FSM	ENSG00000095321.18	ENST00000318080.7	2768	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	5.82384407099929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGTTTCAGCTGAGAGG	-129110116	True	NA	-1	True	AATAAA	-20	NA	129110793	129094793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129095613_129095997_129096136_129097249_129097313_129098012_129098149_129098248_129098372_129098530_129098651_129099865_129099967_129100510_129100690_129101882_129102058_129102399_129102566_129103012_129103067_129104187_129104307_129107813_129108078_129110482
transcript_143938.known	chr9	+	2664	11	FSM	ENSG00000119383.21	ENST00000358994.9	2664	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	219.623063451906	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGTGTGAGGTATGTCT	129110659	True	NA	23	True	ATTAAA	-20	NA	129110949	129148944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111033_129111471_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_143939.known	chr9	+	2746	11	FSM	ENSG00000119383.21	ENST00000337738.6	2746	11	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	273.366804861161	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129100405	True	NA	24	True	ATTAAA	-21	NA	129111412	129148945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129127963_129128069_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_143941.known	chr9	+	2640	10	FSM	ENSG00000119383.21	ENST00000393370.7	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_6	71.0192114505767	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTGAGGTATGTCTTT	129100407	True	NA	25	True	ATTAAA	-22	NA	129111414	129148946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_143942.known	chr9	+	2526	10	FSM	ENSG00000119383.21	ENST00000452489.6	2526	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	228.912889788039	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129110788	False	NA	24	True	ATTAAA	-21	NA	129111687	129148945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111792_129120512_129120611_129123051_129123139_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_143943.known	chr9	+	2653	9	FSM	ENSG00000119383.21	ENST00000357197.8	2653	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	222.589553607082	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTGTGAGGTATGTCTT	129111023	False	NA	24	True	ATTAAA	-21	NA	129111313	129148945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129111632_129120512_129120611_129128984_129129111_129131521_129131640_129134794_129134895_129136470_129136596_129137591_129137693_129142444_129142553_129147386
transcript_143953.known	chr9	+	988	3	FSM	ENSG00000119383.21	ENST00000423100.5	988	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	338.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTCGGGTGGTGGAGA	129138938	True	NA	NA	False	NA	NA	NA	129139381	129147998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129139650_129142444_129142553_129147386
transcript_143954.known	chr9	+	1153	3	FSM	ENSG00000119383.21	ENST00000414510.5	1153	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	334	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGCAGAAACTCAGGGAG	129139564	False	NA	NA	False	NA	NA	NA	129140007	129148287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129140152_129142444_129142553_129147386
transcript_143955.known	chr9	+	857	3	FSM	ENSG00000119383.21	ENST00000432651.5	857	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	327.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTGGTGGAGAGGCCTTAG	129140530	False	NA	NA	False	NA	NA	NA	129141953	129148006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129142083_129142444_129142553_129147386
transcript_143956.known	chr9	+	618	3	FSM	ENSG00000119383.21	ENST00000435132.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	342.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGTCTGGTTTTGAGAG	129141348	True	NA	NA	False	NA	NA	NA	129141993	129147772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129142118_129142444_129142553_129147386
transcript_143957.known	chr9	+	870	3	FSM	ENSG00000119383.21	ENST00000434095.2	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	340	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTGGGGTCGGGTGGTGG	129141379	True	NA	NA	False	NA	NA	NA	129142024	129147995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129142178_129142444_129142553_129147386
transcript_143958.known	chr9	-	973	2	FSM	ENSG00000095321.18	ENST00000393384.3	973	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTGGATGCAGTGACTC	-129110034	True	NA	-2	True	AATACA	-16	NA	129110711	129107333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129108078_129110482
transcript_143959.nnic	chr9	+	790	4	NNC	ENSG00000204055.5	novel	1324	3	NA	NA	7271	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.85861230093008	98	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTGGGGTTGTTT	NA	False	NA	3	True	AATAAA	-13	NA	129208585	129214066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_129208705_129208868_129209237_129211803_129211963_129213922
transcript_14396.nnic	chr1	+	1225	7	NNC	ENSG00000162814.11	novel	927	3	NA	NA	-41843	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.11476292340825	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAATTAATTATTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	217696000	217867150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_217696260_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217866877
transcript_143960.nnic	chr9	+	631	3	NNC	ENSG00000204055.5	novel	1324	3	NA	NA	7271	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	10.5	338	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTGGGGTTGTTT	NA	False	NA	3	True	AATAAA	-13	NA	129208585	129214066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_129208705_129208868_129209237_129213922
transcript_143966.known	chr9	+	903	5	FSM	ENSG00000233901.7	ENST00000657651.1	903	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.69985632065266	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATCCAGCCCAGTCTGGC	129336629	False	NA	11	True	AATAAA	-25	NA	129336866	129359541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129355457_129355599_129359335
transcript_14397.nnic	chr1	+	1081	7	NNC	ENSG00000162814.11	novel	927	3	NA	NA	-41843	17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.11476292340825	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAATTAATTATTGTG	NA	False	NA	NA	False	AATAAA	-22	NA	217696000	217867150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_217696260_217741974_217742099_217774333_217774538_217782173_217782323_217801717_217801851_217862773_217862857_217867021
transcript_143970.known	chr9	+	935	4	FSM	ENSG00000233901.7	ENST00000436710.6	935	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.4721912892465	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	129333681	True	NA	9	True	ATTAAA	-14	NA	129333918	129347462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129334199_129338791_129338918_129341751_129342044_129347225
transcript_143971.known	chr9	+	902	4	FSM	ENSG00000233901.7	ENST00000654190.1	902	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	11.4406682011537	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	129333649	True	NA	24	True	ATTAAA	-29	NA	129333886	129347477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129334199_129338791_129338918_129341831_129342044_129347225
transcript_143972.known	chr9	+	1138	4	FSM	ENSG00000233901.7	ENST00000654148.1	1138	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	10.8012344973464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCCCTTGTTGCCGTGTG	129336481	True	NA	24	True	ATTAAA	-29	NA	129336922	129347477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341349_129342044_129347225
transcript_143973.known	chr9	+	2226	4	FSM	ENSG00000233901.7	ENST00000665063.2	2229	4	3	0	3	0	multi-exon	FALSE	canonical	2	10	junction_1	8.28653526310404	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGTTTGTGTATTGAG	129336437	True	NA	NA	False	AAGAAA	-44	NA	129336878	129348907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341735_129342044_129347225
transcript_143975.known	chr9	+	640	4	FSM	ENSG00000233901.7	ENST00000444125.3	643	4	0	3	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	11.4406682011537	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTTCTTTCAGCATTTC	129336481	True	NA	8	True	ATTAAA	-13	NA	129336922	129347461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129341831_129342044_129347225
transcript_143983.known	chr9	+	430	3	FSM	ENSG00000233901.7	ENST00000667257.1	430	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTTCTTTCAGCATTTCC	129336480	True	NA	9	True	ATTAAA	-14	NA	129336921	129347462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129336989_129338791_129338918_129347225
transcript_143985.known	chr9	+	677	4	FSM	ENSG00000233901.7	ENST00000666671.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACTTTGTATTATCCAG	129338338	False	NA	0	True	AATAAA	-14	NA	129338354	129359530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129338570_129338791_129338918_129355457_129355599_129359335
transcript_143993.known	chr9	+	1562	4	FSM	ENSG00000148335.15	ENST00000611055.4	1562	4	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	256.916761271471	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618169	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626322_129632649_129632866_129634053_129634307_129635207
transcript_143998.known	chr9	+	852	4	FSM	ENSG00000148335.15	ENST00000372480.1	852	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	272.00163398202	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTCCTGGTGGGGGGA	129626396	True	NA	-86	True	GGGGCT	-20	NA	129626443	129635492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626542_129632649_129632866_129634053_129634307_129635207
transcript_144003.known	chr9	+	1072	3	FSM	ENSG00000148335.15	ENST00000482347.1	1072	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	247.5	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATGGTGCTGTGGGGTG	129618216	True	NA	NA	False	NA	NA	NA	129626199	129635930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626296_129634053_129634307_129635207
transcript_144005.known	chr9	+	1346	3	FSM	ENSG00000148335.15	ENST00000617943.4	1346	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	284	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCACTTTGGGAGGCCG	129618169	True	NA	NA	False	AATAAA	-34	NA	129626152	129636131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626322_129634053_129634307_129635207
transcript_144006.known	chr9	+	1530	4	FSM	ENSG00000148335.15	ENST00000372483.9	1530	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_3	65.5303152916436	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTTGGGAGGCCGAGGC	129618179	True	NA	NA	False	AATAAA	-38	NA	129626162	129636135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626296_129632649_129632866_129634053_129634307_129635207
transcript_144007.known	chr9	+	1123	2	FSM	ENSG00000148335.15	ENST00000459968.6	1123	2	0	0	0	0	multi-exon	FALSE	canonical	3	716	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGGGCATGGTGGCGC	129618216	True	NA	NA	False	AATACA	-13	NA	129626199	129633676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129626296_129632649
transcript_144009.known	chr9	-	1751	3	FSM	ENSG00000148344.11	ENST00000340607.5	1751	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	3.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGGCCCAGCACCTCGTC	-129752781	True	NA	-20	True	ATTAAA	-16	NA	129753042	129738348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129739861_129748654_129748738_129752886
transcript_144010.known	chr9	+	663	2	FSM	ENSG00000136816.16	ENST00000486372.1	663	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTTACAAAGCTCTCCTAC	129801064	True	NA	NA	False	NA	NA	NA	129803156	129804480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_129803412_129804072
transcript_144013.known	chr9	-	2080	5	FSM	ENSG00000136827.12	ENST00000351698.5	2080	5	0	0	0	0	multi-exon	FALSE	canonical	1	175	junction_3	83.6551701928817	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGAGTACGTTTTTGAA	-129820516	True	NA	0	True	AATAAA	-16	NA	129824136	129812941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129814223_129818519_129818648_129818744_129818921_129822580_129822847_129823907
transcript_14402.nnic	chr1	+	655	4	NNC	ENSG00000162814.11	novel	847	8	NA	NA	0	-122593	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.88561808316413	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTTGTGTAATTATTT	217631231	True	NA	NA	False	ATTAAA	-17	NA	217631323	217651831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_217631447_217648881_217648972_217651096_217651179_217651471
transcript_144023.known	chr9	-	1795	9	FSM	ENSG00000136819.15	ENST00000372447.7	1795	9	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	77.3384404743204	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTATTGTTTGTATTATGT	-129825601	True	NA	81	True	ATTAAA	-18	NA	129835275	129827289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129831069_129831895_129831974_129833446_129833518_129833657_129833710_129834706_129834767_129835138
transcript_144024.known	chr9	-	783	6	FSM	ENSG00000136819.15	ENST00000461349.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	209.424544884309	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAAAAGTTAGCCAGGC	-129825580	True	NA	NA	False	NA	NA	NA	129835254	129827967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_129828253_129829204_129829304_129829404_129829542_129830870_129830962_129834711_129834767_129835138
transcript_144028.known	chr9	+	6991	19	FSM	ENSG00000148358.20	ENST00000372410.7	6991	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	20.631690833925	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTTGAGATGCAGGGAG	NA	False	NA	21	True	AATAAA	-21	NA	130053705	130140169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130110369_130110427_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_144030.known	chr9	+	6729	18	FSM	ENSG00000148358.20	ENST00000347136.11	6729	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	19.116470552034	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGTGTGTTTGAGATGCA	130050358	True	NA	16	True	AATAAA	-16	NA	130053905	130140164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495_130107540_130124914_130124965_130127482_130127567_130128639_130128762_130135024
transcript_144035.nic	chr9	+	2310	14	ISM	ENSG00000148358.20	ENST00000610997.1	2813	20	-212	27800	7	17417	5prime_fragment	FALSE	canonical	3	49	junction_13	8.54088669648124	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTGCTGACTCTATT	130053588	True	NA	10	True	AATAAA	-24	NA	130053712	130108323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_130054074_130075635_130075750_130076411_130076463_130077298_130077379_130079629_130079770_130083564_130083603_130086419_130086477_130090875_130090984_130092247_130092382_130099456_130099533_130100628_130100703_130101105_130101224_130104419_130104551_130107495
transcript_144036.known	chr9	+	5164	8	FSM	ENSG00000107130.10	ENST00000372398.6	5164	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	23.2712487934826	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCTGTGTGGGCCTGTTG	130169513	True	NA	15	True	ATTAAA	-25	NA	130172403	130237303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130172728_130200957_130200983_130217831_130217971_130219724_130219804_130222649_130222739_130223081_130223160_130226388_130226505_130232989
transcript_144038.known	chr9	+	1548	16	FSM	ENSG00000130707.18	ENST00000372393.7	1548	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	143.462639348678	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGTCTTTTATTTCTAG	130437869	False	NA	11	True	ATTAAA	-6	NA	130444987	130501255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130444996_130450271_130450334_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_144044.known	chr9	+	1532	15	FSM	ENSG00000130707.18	ENST00000352480.10	1532	15	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_1	43.0960010456011	1013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGTGTGTGTGTGTGTGT	130437842	True	NA	30	True	ATTAAA	-25	NA	130444960	130501274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130444996_130452223_130452334_130454304_130454374_130458400_130458590_130464110_130464168_130466724_130466800_130470833_130470905_130471484_130471516_130476870_130476962_130479715_130479801_130480384_130480450_130489332_130489465_130494866_130495024_130499504_130499571_130500975
transcript_144057.known	chr9	+	3153	19	FSM	ENSG00000107164.16	ENST00000319725.10	3153	19	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_17	52.8382110144721	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570837	True	NA	34	True	AATAAA	-31	NA	130579576	130638352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130634666_130634739_130635998_130636127_130637013
transcript_144059.nnic	chr9	+	3021	18	NIC	ENSG00000107164.16	novel	3153	19	NA	NA	56	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_16	129.872815080315	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGGCCTGTTTGCTTTC	130570897	True	NA	34	True	AATAAA	-31	NA	130579636	130638352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_130579765_130595482_130595589_130609953_130609988_130612455_130612506_130612955_130613028_130614287_130614346_130616354_130616518_130617796_130617896_130620353_130620459_130622707_130622811_130623610_130623712_130626363_130626506_130630627_130630789_130631556_130631631_130631941_130632023_130632201_130632279_130635998_130636127_130637013
transcript_144060.nnic	chr9	+	446	3	NNC	ENSG00000107164.16	novel	3153	19	NA	NA	56	14662	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	316.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAAGAGTTGAAGTATTTT	130570897	True	NA	NA	False	AATAAA	-28	NA	130579636	130596748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_130579765_130595482_130595589_130596536
transcript_144061.known	chr9	+	2228	2	FSM	ENSG00000107164.16	ENST00000467100.1	2228	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTGAAGTCTAGTGAG	NA	False	NA	NA	False	AATAAA	-19	NA	130578964	130582086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130579765_130580658
transcript_144063.known	chr9	+	2012	9	FSM	ENSG00000130713.17	ENST00000372358.10	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	7.18396652275051	513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTATCTAAAAATGGTGC	130687522	True	NA	5	True	NA	NA	NA	130693779	130704892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130698161_130698252_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_144064.known	chr9	+	1885	8	FSM	ENSG00000130713.17	ENST00000372351.7	1885	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	70.345503025555	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGAATTCCTGTGCATT	130687528	True	NA	11	True	GATAAA	-27	NA	130693785	130704861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_130693914_130695491_130695594_130697581_130697628_130699328_130699395_130700866_130700936_130702133_130702311_130703052_130703182_130703693
transcript_144065.nnic	chr9	-	972	4	NNC	ENSG00000130720.13	novel	449	3	NA	NA	-1839	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	32.9983164553722	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	NA	False	NA	-4	True	AATAAA	-16	NA	130941125	130938016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_130938216_130938535_130938649_130940355_130940487_130940596
transcript_144070.known	chr9	-	449	3	FSM	ENSG00000130720.13	ENST00000486250.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	19	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130939124	False	NA	-4	True	AATAAA	-16	NA	130939139	130938016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_130938216_130938535_130938649_130939002
transcript_144071.nnic	chr9	-	544	3	NNC	ENSG00000130720.13	novel	449	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	31.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130938681	True	NA	-4	True	AATAAA	-16	NA	130939254	130938016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_130938216_130938535_130938649_130939022
transcript_144073.known	chr9	-	385	3	FSM	ENSG00000130720.13	ENST00000463475.1	385	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	27	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACGCTGGGTATTGTGAT	-130938713	True	NA	-4	True	AATAAA	-16	NA	130939286	130938016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_130938216_130938535_130938649_130939213
transcript_144077.known	chr9	+	849	6	FSM	ENSG00000126878.13	ENST00000372298.1	849	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	478.839847965894	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGATGTTCAGGGACCC	131079155	True	NA	NA	False	NA	NA	NA	131096555	131121603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117836_131121110
transcript_144079.known	chr9	+	3284	6	FSM	ENSG00000126878.13	ENST00000372300.5	3284	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	473.676514089521	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079150	True	NA	27	True	AATAAA	-15	NA	131096550	131123145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117848_131120234
transcript_144081.known	chr9	+	3374	6	FSM	ENSG00000126878.13	ENST00000247291.8	3374	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_2	56.9792944849267	1391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAACGTCTTGATTGGTGTA	131079130	True	NA	26	True	AATAAA	-14	NA	131096530	131123144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131096661_131096801_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_144085.known	chr9	+	3398	6	FSM	ENSG00000126878.13	ENST00000372314.3	3398	6	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_1	427.368412496759	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGTCTTGATTGGTGTAT	131079129	True	NA	27	True	AATAAA	-15	NA	131096529	131123145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131096661_131096779_131096864_131111596_131111664_131114576_131114619_131117755_131117919_131120234
transcript_144100.nic	chr9	+	1867	11	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-166	18286	-13	1802	5prime_fragment	FALSE	canonical	3	129	junction_2	10.121264743104	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTATTCTTTGTGATCTT	131117705	True	NA	NA	False	AATACA	-19	NA	131125572	131141151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105_131133210_131134897_131135005_131135939_131136007_131139280_131139408_131140548
transcript_144101.nic	chr9	+	1106	8	ISM	ENSG00000126883.18	ENST00000483497.6	3275	11	8755	2	424	0	3prime_fragment	FALSE	canonical	3	173	junction_2	22.9524797468729	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAACGTATGTGGGTTTT	131198854	False	NA	23	True	ATTAAA	-15	NA	131198875	131233701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131199016_131201646_131201718_131215211_131215369_131222777_131222931_131228159_131228332_131230629_131230770_131232283_131232309_131233453
transcript_144102.nic	chr9	+	963	7	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-166	26228	-13	0	5prime_fragment	FALSE	canonical	3	129	junction_2	11.6153633893506	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCTGTGGAAGAAATT	131117705	True	NA	2	True	NA	NA	NA	131125572	131133209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105
transcript_144103.nic	chr9	+	1038	7	ISM	ENSG00000126883.18	ENST00000651022.1	2160	18	-166	26153	-13	75	5prime_fragment	FALSE	canonical	3	129	junction_2	11.6153633893506	44	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGTTTTTTTGTGTTTGTG	131117705	True	NA	77	True	AATAAA	-21	NA	131125572	131133284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131125750_131127523_131127720_131128331_131128484_131129278_131129478_131130765_131130837_131132595_131132660_131133105
transcript_144105.nic	chr9	+	699	4	ISM	ENSG00000126883.18	ENST00000528406.1	393	5	-248	3	-129	0	intron_retention	FALSE	canonical	3	221	junction_3	10.077477638554	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGAACGTATGTGGGTTTT	131228012	True	NA	23	True	ATTAAA	-15	NA	131228045	131233701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131228332_131230629_131230770_131232283_131232309_131233453
transcript_144106.known	chr9	+	972	2	FSM	ENSG00000160539.6	ENST00000372261.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTCTGGAGGCTCTA	131289572	False	NA	7	True	AATAAA	-22	NA	131289811	131291445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131290449_131291110
transcript_144107.known	chr9	+	2065	2	FSM	ENSG00000160539.6	ENST00000372264.4	2065	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCCGTGTGGCTTTTT	131289483	True	NA	8	True	AATACA	-18	NA	131289722	131309261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131290449_131307922
transcript_144108.nnic	chr9	+	645	2	NNC	ENSG00000288701.1	novel	266	2	NA	NA	8	-53208	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGGTTATCTGTCGGT	131373424	True	NA	NA	False	AATAAA	-33	NA	131373643	131377051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_131373732_131376494
transcript_14411.known	chr1	+	7765	5	FSM	ENSG00000067533.6	ENST00000366932.4	7765	5	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	19.8179211826064	2636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTTTTCTTGATTTTT	218279949	True	NA	11	True	AATAAA	-21	NA	218285292	218337983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_218285456_218302293_218302560_218305027_218305126_218307430_218307633_218330947
transcript_144110.known	chr9	+	3057	20	FSM	ENSG00000130714.19	ENST00000402686.8	3057	20	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	26.076915848432	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501423	True	NA	14	True	ATTAAA	-17	NA	131502917	131523799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_144113.known	chr9	+	2703	20	FSM	ENSG00000130714.19	ENST00000679023.1	2703	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	36.1850430526236	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501449	True	NA	14	True	ATTAAA	-17	NA	131502943	131523799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931_131523171_131523346
transcript_144114.known	chr9	+	3309	20	FSM	ENSG00000130714.19	ENST00000676640.1	3309	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	36.3833087054293	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTAGTTGGTGTTTGTT	131501411	True	NA	14	True	ATTAAA	-17	NA	131502905	131523799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503314_131504188_131504341_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_144116.known	chr9	+	2935	19	FSM	ENSG00000130714.19	ENST00000341012.13	2935	19	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	27.5444085876688	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTATTTATT	131501400	True	NA	21	True	ATTAAA	-24	NA	131502894	131523806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506113_131506221_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_14412.known	chr1	+	5868	7	FSM	ENSG00000092969.12	ENST00000366930.9	5868	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	3.18416219575713	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGTCTTGCTTTGTC	218345211	True	NA	NA	False	AATAAA	-33	NA	218345335	218444619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_218347048_218405168_218405333_218434081_218434215_218434337_218434449_218435969_218436148_218437342_218437497_218441203
transcript_144121.known	chr9	+	2461	18	FSM	ENSG00000130714.19	ENST00000677216.1	2461	18	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	32.4499081630809	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTTGCTAACTGCTGCAG	131501403	True	NA	NA	False	NA	NA	NA	131502897	131523442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131509742_131509809_131509902_131509997_131510259_131510416_131511336_131511468_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_144124.known	chr9	+	2562	16	FSM	ENSG00000130714.19	ENST00000676835.1	2562	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.4417136765508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTTTTTTAAATG	131501460	True	NA	-30	True	NA	NA	NA	131502954	131523755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506402_131506454_131507367_131507515_131508910_131509023_131510259_131510416_131511336_131511473_131512040_131512137_131513238_131513332_131515425_131515523_131518444_131518538_131518836_131518958_131519388_131519487_131520079_131520194_131521345_131521473_131522046_131522225_131522931
transcript_144127.known	chr9	-	2051	7	FSM	ENSG00000130717.13	ENST00000372210.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	137.064968374693	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527012	True	NA	-4	True	AATAAA	-21	NA	131531179	131523800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531093
transcript_144134.known	chr9	+	607	3	FSM	ENSG00000130714.19	ENST00000483472.2	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	40	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCTGGCACTTTGGGAGG	131501489	True	NA	NA	False	NA	NA	NA	131502983	131506812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_131503074_131506113_131506221_131506402
transcript_144136.nic	chr9	+	827	2	ISM	ENSG00000130714.19	ENST00000430619.2	548	6	-47	3236	-2	271	5prime_fragment	FALSE	canonical	3	13	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGAAAACAGGGAGG	131501433	True	NA	NA	False	NA	NA	NA	131502927	131507083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_131503074_131506402
transcript_144137.known	chr9	-	2162	7	FSM	ENSG00000130717.13	ENST00000372215.5	2162	7	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_3	43.3503171845374	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527096	True	NA	-4	True	AATAAA	-21	NA	131531263	131523800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_144138.known	chr9	-	2063	6	FSM	ENSG00000130717.13	ENST00000372208.7	2063	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	159.73978840602	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527092	True	NA	-4	True	AATAAA	-21	NA	131531259	131523800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131529127_131529271_131529487_131529585_131530485_131530646_131531066
transcript_144139.known	chr9	-	2114	7	FSM	ENSG00000130717.13	ENST00000372211.7	2114	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_6	140.255322735202	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCAGTTGGTTCCTTTTTT	-131527033	True	NA	-4	True	AATAAA	-21	NA	131531200	131523800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131525222_131525928_131525978_131528943_131529039_131529127_131529271_131529487_131529585_131530485_131530688_131531093
transcript_14414.known	chr1	-	557	3	FSM	ENSG00000232480.2	ENST00000414452.2	900	3	337	6	200	-1	multi-exon	FALSE	canonical	1	1	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGATGTGTGTTGTGTAT	-218345664	False	NA	NA	False	AATAAA	-37	NA	218345678	218344195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_218344463_218345174_218345389_218345602
transcript_144141.known	chr9	-	1385	8	FSM	ENSG00000160563.14	ENST00000292035.10	1385	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_2	23.460779255287	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAAGGCTTTGTCTCCTGT	-132079305	True	NA	-7	True	AATAAA	-15	NA	132079867	131860111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131893884_131893993_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_144144.known	chr9	-	1281	7	FSM	ENSG00000160563.14	ENST00000357028.6	1281	7	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	140.488137102983	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTTTGTCTCCTGTTTGTT	-132079304	True	NA	-2	True	AATAAA	-20	NA	132079866	131860106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131860673_131863062_131863141_131884057_131884100_131939380_131939475_132014336_132014468_132077441_132077587_132079641
transcript_144146.known	chr9	-	2042	4	FSM	ENSG00000160563.14	ENST00000651555.1	2042	4	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_3	19.3448241713959	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCTGCCTCCAGAGGTTG	-132079294	True	NA	NA	False	TATAAA	-28	NA	132079856	131937923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_131939475_132014336_132014468_132077441_132077587_132079641
transcript_144147.known	chr9	-	762	3	FSM	ENSG00000160563.14	ENST00000474263.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	182	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTGAATTTTTAATTT	-132079304	True	NA	NA	False	AATAAA	-15	NA	132079866	132073350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132073743_132077441_132077587_132079641
transcript_144151.known	chr9	-	1780	10	FSM	ENSG00000125482.13	ENST00000612514.4	1780	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_9	40.7370368686716	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403726	True	NA	4	True	ATTAAA	-42	NA	132406851	132375547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132406789
transcript_144154.known	chr9	-	3143	11	FSM	ENSG00000125482.13	ENST00000334270.3	3143	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	20.9047841414352	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAGGAACATATGAATTGA	-132403715	True	NA	4	True	ATTAAA	-42	NA	132406840	132375547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132376169_132379058_132379145_132386555_132386622_132388138_132388229_132390596_132390832_132392075_132392207_132396432_132396512_132398140_132398327_132400034_132400259_132401454_132402829_132406789
transcript_144155.known	chr9	+	1725	6	FSM	ENSG00000188523.9	ENST00000393216.3	1725	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	3.9496835316263	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGTCTCCATTTGAA	132409950	True	NA	18	True	ATTAAA	-20	NA	132410210	132573319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_132410467_132498694_132498795_132499371_132499601_132537600_132537707_132542945_132543048_132572387
transcript_144157.known	chr9	-	2814	20	FSM	ENSG00000125485.18	ENST00000372159.8	4159	20	-44	1389	-44	-1389	multi-exon	FALSE	canonical	3	57	junction_5	16.9948664238511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTATCACTAATTATT	-132668990	True	NA	-30	True	AAAAAG	-5	NA	132670027	132594385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132595113_132612086_132612256_132618329_132618442_132625663_132625746_132630263_132630404_132632040_132632092_132642003_132642064_132645894_132646072_132646822_132647059_132648188_132648296_132648431_132648552_132650233_132650299_132651074_132651117_132652447_132652493_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_144158.known	chr9	-	1333	7	FSM	ENSG00000125485.18	ENST00000480876.3	1333	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	32.9616780856531	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGCTTGAGTCTGTG	-132670122	True	NA	-5	True	AATAAA	-24	NA	132670401	132658080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132658359_132658670_132658736_132659709_132659781_132661207_132661252_132662260_132662337_132662438_132662696_132669859
transcript_144164.nic	chr9	+	710	5	NIC	ENSG00000165698.16	novel	2536	4	NA	NA	306	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.48746859276655	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTGACTTGGTTTC	132878221	True	NA	4	True	AATAAA	-16	NA	132878332	132890030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_132878437_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_144165.known	chr9	+	894	5	FSM	ENSG00000165698.16	ENST00000350499.6	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.27760839478607	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGAGGACCAGCAATCA	132878856	True	NA	NA	False	NA	NA	NA	132878897	132890201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_132879015_132883910_132884092_132887368_132887572_132888289_132888438_132889956
transcript_14417.known	chr1	+	2169	5	FSM	ENSG00000143353.12	ENST00000483635.5	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	134.46560898609	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172520	True	NA	13	True	AATAAA	-25	NA	219173895	219212865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219174305_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_144172.known	chr9	-	2232	12	FSM	ENSG00000165699.15	ENST00000645150.1	2232	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_11	24.7600050734985	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132941045	True	NA	-6	True	AATAAA	-19	NA	132944633	132909806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944571
transcript_144182.known	chr9	-	494	2	FSM	ENSG00000165699.15	ENST00000642249.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCTGAATTGTCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	132944834	132939070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132939277_132944546
transcript_144183.nnic	chr9	-	446	2	NIC	ENSG00000165699.15	novel	494	2	NA	NA	23	0	combination_of_known_splicesites	FALSE	canonical	3	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCTGAATTGTCCTT	NA	False	NA	NA	False	AATAAA	-21	NA	132944811	132939070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_132939277_132944571
transcript_144184.nic	chr9	-	361	2	ISM	ENSG00000165699.15	ENST00000646831.1	2005	3	-18	2703	-1	-2042	5prime_fragment	FALSE	canonical	3	4	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGCACGTGTGTCTG	-132941046	True	NA	-5	True	ATTAAA	-18	NA	132944634	132943437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_132943707_132944542
transcript_144185.nnic	chr9	-	567	2	NIC	ENSG00000165699.15	novel	2005	3	NA	NA	-35	-2042	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTATGCACGTGTGTCTG	NA	False	NA	-5	True	ATTAAA	-18	NA	132944869	132943437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_132943707_132944571
transcript_144186.known	chr9	-	2299	12	FSM	ENSG00000165699.15	ENST00000642745.1	2299	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_11	24.5558900375692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGAACATGTATGTGTAA	-132941028	True	NA	49	True	ATTAAA	-10	NA	132944616	132909751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132910693_132911001_132911114_132911452_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_144187.known	chr9	-	1298	4	FSM	ENSG00000165699.15	ENST00000493467.6	1298	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	36.2613966759264	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTGTTCTGTATTAAG	-132912448	False	NA	-6	True	AATAAA	-19	NA	132912468	132909806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132910690_132911001_132911114_132911452_132911569_132912281
transcript_144188.known	chr9	-	2005	3	FSM	ENSG00000165699.15	ENST00000646831.1	2005	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATGTGCCAAACACTGTG	-132941028	True	NA	NA	False	AATAAA	-19	NA	132944616	132940734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132942427_132943467_132943707_132944542
transcript_144189.known	chr9	-	1717	10	FSM	ENSG00000165699.15	ENST00000403810.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	22.4422441165685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTCTTAGGTTGGATT	-132941045	True	NA	NA	False	AGTAAA	-20	NA	132944633	132910998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_132911569_132912281_132912458_132921362_132921437_132921818_132921974_132923347_132923493_132925586_132925740_132927200_132927305_132928766_132928953_132935032_132935096_132944542
transcript_144193.known	chr9	+	1389	1	FSM	ENSG00000196205.8	ENST00000436459.2	1389	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1041	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTATCCCTAATACCTGC	132722914	False	NA	NA	False	NA	NA	NA	133019485	133020874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133019500_133020900
transcript_1442.known	chr1	-	581	5	FSM	ENSG00000007923.17	ENST00000460594.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	422.133865023881	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTAGCATTGTCTTTCA	-6679117	True	NA	NA	False	ATTAAA	-16	NA	6701823	6654107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6654288_6667708_6667811_6678393_6678468_6680907_6681038_6701728
transcript_14420.known	chr1	+	475	5	FSM	ENSG00000143353.12	ENST00000478794.5	475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	147.05356167057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTCATGGTACTGCAGA	219174891	False	NA	NA	False	NA	NA	NA	219174970	219211530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219175021_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_144206.known	chr9	+	1999	9	FSM	ENSG00000148308.18	ENST00000372099.10	1999	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	173.762724354218	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	NA	False	NA	25	True	ATTAAA	-14	NA	133030674	133058501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133031165_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_14421.known	chr1	+	1701	4	FSM	ENSG00000143353.12	ENST00000469590.5	1701	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	164.121905911429	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219174114	False	NA	13	True	AATAAA	-25	NA	219174193	219212865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219174305_219179146_219179247_219210531_219210648_219211491
transcript_144210.known	chr9	+	2098	11	FSM	ENSG00000148308.18	ENST00000372097.10	2098	11	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_8	51.0141156935999	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGTTTCTTGGTGTGA	133022041	True	NA	27	True	ATTAAA	-16	NA	133030996	133058503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133056011_133056095_133056765_133056909_133057813
transcript_144211.known	chr9	+	2110	12	FSM	ENSG00000148308.18	ENST00000372108.9	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_9	159.604832255602	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTCTTGGTTTCTTGGTGT	133022048	True	NA	25	True	ATTAAA	-14	NA	133031003	133058501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133031165_133042086_133042307_133043727_133043927_133050782_133050979_133052059_133052165_133053827_133053943_133054407_133054489_133054711_133054810_133054943_133054965_133056011_133056095_133056765_133056909_133057813
transcript_144215.known	chr9	-	1935	7	FSM	ENSG00000148288.13	ENST00000372043.7	1935	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.59770474137791	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGCTAGGGTGATTTTT	-133162766	True	NA	-21	True	AATAAA	-17	NA	133163919	133152952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133154243_133155177_133155313_133155900_133155937_133156014_133156066_133161466_133161533_133162341_133162533_133163753
transcript_144216.known	chr9	-	847	7	FSM	ENSG00000148288.13	ENST00000372038.7	847	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	3.76017139089283	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATGGAGACCATCAGCCA	-133162744	False	NA	NA	False	NA	NA	NA	133163897	133154074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133156014_133156103_133161466_133161533_133162341_133162533_133163753
transcript_144218.known	chr9	-	1449	6	FSM	ENSG00000148288.13	ENST00000540636.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTCACAGTAACGCGGC	-133162761	True	NA	NA	False	NA	NA	NA	133163914	133153401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133154262_133155177_133155313_133155900_133155937_133161466_133161533_133162341_133162533_133163753
transcript_144220.known	chr9	-	633	4	FSM	ENSG00000148288.13	ENST00000372036.4	633	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.0184900284226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTGGCCTTAATTTTTT	-133162742	False	NA	NA	False	ATTAAA	-14	NA	133163895	133160017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133160252_133161466_133161533_133162341_133162533_133163753
transcript_144222.known	chr9	-	390	2	FSM	ENSG00000175164.16	ENST00000679909.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATGATTTATAATCCTT	-133275186	True	NA	NA	False	AATAAA	-26	NA	133275219	133233277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133233610_133275161
transcript_144223.known	chr9	-	474	2	FSM	ENSG00000175164.16	ENST00000647353.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATAAAACTTTGGTCTCC	-133275181	True	NA	NA	False	NA	NA	NA	133275214	133250731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133251153_133275161
transcript_144226.known	chr9	-	4235	5	FSM	ENSG00000148296.7	ENST00000372022.6	4235	5	0	0	0	0	multi-exon	TRUE	canonical	3	557	junction_3	51.8700298823897	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACTGGATTTAATTCAG	-133316829	True	NA	NA	False	AATAAA	-18	NA	133336188	133328775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133332349_133332547_133332761_133333717_133333807_133334391_133334602_133336038
transcript_14423.known	chr1	+	1857	5	FSM	ENSG00000143353.12	ENST00000366928.10	1857	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_2	35.4118624192515	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGAGTCTCTGCATCGA	219172502	True	NA	6	True	AATAAA	-18	NA	219173877	219212858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219173982_219179146_219179247_219193081_219193252_219210531_219210648_219211491
transcript_144230.nic	chr9	-	314	2	ISM	ENSG00000148296.7	ENST00000372022.6	4235	5	-116	5778	-116	-2748	5prime_fragment	FALSE	canonical	3	588	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GGAAGAAAACACAAAAGAAA	NA	False	NA	NA	False	AAAAAG	-5	NA	133336304	133334553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_133334602_133336038
transcript_144233.known	chr9	-	4044	5	FSM	ENSG00000148297.16	ENST00000343730.10	4044	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	85.0951673128386	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAGAAAAAGAAATTA	-133338507	True	NA	NA	False	NA	NA	NA	133348131	133338311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347921
transcript_144234.nic	chr9	-	1434	5	NIC	ENSG00000148297.16	novel	4044	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_4	142.480700447464	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-133338510	True	NA	-9	True	ATTAAA	-20	NA	133348134	133340904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_133341695_133344124_133344334_133345171_133345253_133346539_133346701_133347941
transcript_144235.known	chr9	-	3867	4	FSM	ENSG00000148297.16	ENST00000610888.4	3867	4	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	12.1928941054479	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGCTCTTTCTTCCTCA	-133338493	True	NA	-9	True	ATTAAA	-20	NA	133348117	133340904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133344334_133345171_133345253_133346539_133346701_133347921
transcript_14424.known	chr1	+	1819	5	FSM	ENSG00000143353.12	ENST00000366927.3	1819	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	129.263297188336	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGCATCGACCTATGT	219172499	True	NA	13	True	AATAAA	-25	NA	219173874	219212865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219173982_219179146_219179247_219193129_219193252_219210531_219210648_219211491
transcript_14425.known	chr1	+	642	2	FSM	ENSG00000143353.12	ENST00000481007.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCCTGACTTTTTTATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	219210341	219211827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_219210648_219211491
transcript_14426.known	chr1	-	4862	32	FSM	ENSG00000136628.18	ENST00000366923.8	4862	32	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_18	124.085256515411	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTTGTATTCATTT	-220038987	True	NA	-5	True	AATAAA	-14	NA	220046505	219968599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_219968957_219969057_219969123_219972068_219972148_219973237_219973399_219978545_219978720_219979417_219979616_219980084_219980241_219980755_219980858_219981377_219981458_219982771_219982845_219983188_219983399_219984205_219984258_219987141_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_144281.known	chr9	+	966	7	FSM	ENSG00000148303.17	ENST00000489392.1	966	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2187.13130226179	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTGTACATAAAAATAATTGA	133347196	True	NA	-21	True	ACTAAA	-29	NA	133348936	133351385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133349043_133349386_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_144285.known	chr9	+	947	6	FSM	ENSG00000148303.17	ENST00000496554.5	947	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2306.46812247644	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACCACTGTCGCCTTCAC	133241136	True	NA	NA	False	NA	NA	NA	133348217	133350695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348574_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596
transcript_144286.known	chr9	+	887	8	FSM	ENSG00000148303.17	ENST00000323345.11	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1042.24878537336	179161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_144287.known	chr9	+	941	8	FSM	ENSG00000148303.17	ENST00000468019.5	941	8	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	1941.44053396924	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGAGTTTTCTGTACA	133241170	True	NA	15	True	ACTAAA	-16	NA	133348251	133351372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348389_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_144288.known	chr9	+	1164	7	FSM	ENSG00000148303.17	ENST00000463740.5	1164	7	0	0	0	0	multi-exon	FALSE	canonical	3	2872	junction_1	1101.84219479117	3562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133241136	True	NA	20	True	CATAAA	-31	NA	133348217	133351426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133348247_133348921_133349043_133349550_133349701_133349911_133350053_133350239_133350728_133351001_133351072_133351261
transcript_144289.known	chr9	+	680	7	FSM	ENSG00000148303.17	ENST00000315731.4	680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2190.00984903924	5460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGTCTGTTGAGTATC	133347181	True	NA	20	True	CATAAA	-31	NA	133348921	133351426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133349043_133349550_133349612_133350000_133350053_133350239_133350320_133350596_133350728_133351001_133351072_133351261
transcript_14429.known	chr1	-	2968	21	FSM	ENSG00000136628.18	ENST00000609181.5	2968	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	224.955434475364	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	-220038933	True	NA	NA	False	NA	NA	NA	220046451	219987295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018125_220018147_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_144291.known	chr9	-	1092	9	FSM	ENSG00000148290.10	ENST00000371974.8	1092	9	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_8	50.4002728167219	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTCCCAAAACTTGAT	-133356453	False	NA	45	True	CATAAA	-25	NA	133356487	133351757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356399
transcript_144292.nnic	chr9	-	1010	9	NNC	ENSG00000148290.10	novel	1092	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_8	130.150633882436	162	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356477	False	NA	-2	True	TATAAA	-25	NA	133356511	133351804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356268_133356321_133356458
transcript_144294.known	chr9	-	991	8	FSM	ENSG00000148290.10	ENST00000615505.4	991	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	137.467621419647	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATGACTGGTTCATCAT	-133356451	False	NA	-2	True	TATAAA	-25	NA	133356485	133351804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133351983_133352060_133352143_133352445_133352609_133352693_133352767_133353748_133353941_133354658_133354742_133354823_133354958_133356399
transcript_144299.known	chr9	+	833	6	FSM	ENSG00000148291.10	ENST00000371964.5	833	6	0	0	0	0	multi-exon	TRUE	canonical	3	506	junction_5	31.4044582822248	1811	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCGAGAAAGCCTTCAGA	133350446	True	NA	14	True	AATAAA	-16	NA	133356549	133361158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133356671_133356913_133357069_133357710_133357815_133359949_133360130_133360264_133360435_133361055
transcript_14430.nic	chr1	-	3080	20	ISM	ENSG00000136628.18	ENST00000366923.8	4862	32	-79	18696	-54	0	5prime_fragment	FALSE	canonical	3	596	junction_6	55.2185283448968	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAGAAGAAGAAAGAAAAA	-220046433	True	NA	NA	False	NA	NA	NA	220046584	219987295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_219987405_219988589_219988824_219996982_219997343_220001137_220001256_220005247_220005361_220006105_220006314_220007201_220007339_220010945_220011057_220018448_220018509_220018994_220019080_220019987_220020222_220022346_220022519_220024263_220024457_220025131_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_144303.known	chr9	-	2930	6	FSM	ENSG00000148248.14	ENST00000371989.8	2930	6	0	0	0	0	multi-exon	FALSE	canonical	3	1400	junction_2	41.6797312851223	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGTGATCCTATAGCG	-133359154	True	NA	-15	True	AATAAA	-18	NA	133376060	133361463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_144305.known	chr9	-	3148	6	FSM	ENSG00000148248.14	ENST00000613129.4	3148	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	591.145531996986	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCGTTGCCCAGCCTGAA	-133376152	False	NA	-1	True	AATAAA	-32	NA	133376166	133361449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133363760_133364839_133365027_133365984_133366029_133366598_133366676_133367258_133367544_133375921
transcript_144308.known	chr9	-	1206	6	FSM	ENSG00000148248.14	ENST00000485435.6	1206	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	591.059252528881	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCTTGGATTGGTGCCAA	-133359193	True	NA	-9	True	GATAAA	-18	NA	133376099	133362867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133363476_133364914_133365027_133365984_133366029_133366598_133366676_133367258_133367446_133375921
transcript_144311.known	chr9	-	2326	8	FSM	ENSG00000148300.12	ENST00000371942.8	2326	8	0	0	0	0	multi-exon	TRUE	canonical	3	239	junction_6	19.2491717288017	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCCTGTGGAGGCTCAG	-133410878	True	NA	-37	True	AATAAA	-20	NA	133418010	133406061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133407073_133407806_133407882_133408767_133408843_133410984_133411074_133412298_133412493_133412777_133412922_133414664_133415012_133417619
transcript_144316.nic	chr9	+	943	3	ISM	ENSG00000198870.8	ENST00000371957.4	2826	18	-28	21608	-28	-67	5prime_fragment	FALSE	canonical	2	2	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTAAATATTTTTTCT	133376270	True	NA	NA	False	AATAAA	-39	NA	133376337	133384488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_133376561_133379035_133379123_133383855
transcript_144317.nic	chr9	+	1010	3	ISM	ENSG00000198870.8	ENST00000371957.4	2826	18	-28	21541	-28	0	5prime_fragment	FALSE	canonical	2	2	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGTTTTCTTTTGTTTTT	133376270	True	NA	NA	False	TATAAA	-38	NA	133376337	133384555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_133376561_133379035_133379123_133383855
transcript_144318.known	chr9	+	2880	6	FSM	ENSG00000160325.15	ENST00000540581.5	2880	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	46.1761843378164	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGCCTGTGTGTGAGT	133458853	True	NA	35	True	AATAAA	-43	NA	133459964	133470787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468339_133468465_133468562
transcript_144319.known	chr9	+	2803	5	FSM	ENSG00000160325.15	ENST00000316948.9	2803	5	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	13.683932183404	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	133458866	True	NA	96	True	NA	NA	NA	133459977	133470848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133465321_133465448_133467920_133468029_133468562
transcript_144321.nnic	chr9	+	1425	4	NNC	ENSG00000160325.15	novel	2803	5	NA	NA	0	741	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	50.334437073991	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTCTGTGTTTATGATGA	133458855	True	NA	-86	True	GATAAA	-18	NA	133459966	133466594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_133460188_133463482_133463556_133465321_133465448_133465589
transcript_144323.nnic	chr9	+	744	4	NNC	ENSG00000160325.15	novel	2803	5	NA	NA	0	-1068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	51.2661898547398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCTTGTTTGCCTT	133458855	True	NA	NA	False	ATTAAA	-40	NA	133459966	133466960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_133460188_133463482_133463556_133465321_133465448_133466636
transcript_144324.known	chr9	+	2688	4	FSM	ENSG00000160325.15	ENST00000291722.11	2688	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	37.3838943337309	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCCTGTCCCGAGGCTGC	133458855	True	NA	96	True	NA	NA	NA	133459966	133470848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133467920_133468029_133468562
transcript_144325.known	chr9	+	795	3	FSM	ENSG00000160325.15	ENST00000489519.1	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGGTTGCAGAGCAGA	133458886	True	NA	NA	False	NA	NA	NA	133459997	133465853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_133460188_133463482_133463556_133465321
transcript_144328.known	chr9	-	2491	10	FSM	ENSG00000160326.14	ENST00000371899.9	2491	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.5365375376581	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTAGCGAGGAAAGAGTG	-133477247	True	NA	-15	True	AATAAA	-16	NA	133479099	133471093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133472177_133473104_133473251_133473414_133473601_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_14433.nic	chr1	-	930	7	ISM	ENSG00000136628.18	ENST00000609181.5	2968	21	-133	37852	-54	-23947	5prime_fragment	FALSE	canonical	3	659	junction_2	47	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAGATTTTGAGAAGGTAA	-220046433	True	NA	13	True	AAAAAG	-5	NA	220046584	220025147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_220025259_220030385_220030481_220032386_220032527_220033501_220033659_220034913_220035014_220040184_220040270_220046342
transcript_144332.known	chr9	-	2301	9	FSM	ENSG00000160326.14	ENST00000371897.8	2301	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	50.3878705642539	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCTAGCGAGGAAAGAGT	-133477244	True	NA	-16	True	AATAAA	-15	NA	133479096	133471094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133472177_133473104_133473251_133473979_133474089_133474960_133475114_133475399_133475612_133476236_133476337_133477034_133477242_133478253_133478417_133478967
transcript_144339.known	chr9	-	3215	21	FSM	ENSG00000123453.19	ENST00000439388.6	3215	21	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_20	11.2795168336237	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCGAAGCAAATAGGCTTC	-133737627	True	NA	-13	True	AGTAAA	-25	NA	133738352	133663559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_133664015_133666734_133666871_133670583_133670753_133671534_133671698_133685192_133685287_133690379_133690528_133694257_133694372_133696222_133696362_133702915_133703030_133704947_133705032_133708286_133708429_133712618_133712710_133713037_133713125_133717325_133717456_133718937_133719043_133729764_133729866_133730063_133730188_133731304_133731485_133732422_133732602_133733842_133734204_133738253
transcript_144342.nic	chr9	-	1560	4	ISM	ENSG00000123453.19	ENST00000427237.6	1957	15	3	36210	0	-5171	5prime_fragment	FALSE	canonical	3	36	junction_3	8.5764535535124	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCTGTTGTTATTTTGT	-133737627	True	NA	NA	False	AATATA	-19	NA	133738352	133730563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_133731485_133732422_133732602_133733842_133734204_133738253
transcript_144344.known	chr9	-	5661	12	FSM	ENSG00000169925.17	ENST00000303407.12	5661	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	28.745966299855	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTTTTTTTTTTTTGCA	-134060606	True	NA	1	True	AATAAA	-26	NA	134068026	134030304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_134033706_134034700_134034830_134036031_134036325_134040033_134040270_134041759_134041952_134045292_134045422_134048082_134048455_134050373_134050589_134051561_134051710_134052305_134052444_134053264_134053591_134067944
transcript_144348.known	chr9	+	5682	3	FSM	ENSG00000235106.10	ENST00000603928.3	5682	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	12.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAACTCACCAAGTGTCA	134024444	True	NA	NA	False	ATTAAA	-17	NA	134025480	134031587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_134025537_134025844_134026091_134026207
transcript_144350.known	chr9	+	2300	2	FSM	ENSG00000235106.10	ENST00000432807.1	2300	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTTCCTCACACTTATT	134024458	True	NA	NA	False	AATAAA	-19	NA	134025494	134028102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_134025537_134025844
transcript_144351.known	chr9	+	3157	14	FSM	ENSG00000196363.10	ENST00000358625.4	3157	14	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	27.1105560348863	522	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTCTGGTGAGAATTTC	134126613	True	NA	22	True	AATAAA	-19	NA	134136081	134159968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_134136201_134139819_134139959_134140702_134140812_134141509_134141584_134141948_134142039_134142332_134142423_134142635_134142720_134148287_134148344_134151982_134152030_134154465_134154542_134155339_134155374_134155692_134155768_134156505_134156594_134157892
transcript_144355.nic	chr9	+	715	4	NIC	ENSG00000130558.20	novel	1057	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	90.7119984713525	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTTCTGAGGACTGT	135086781	True	NA	18	True	AATAAA	-17	NA	135087645	135098107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_135087728_135090194_135090345_135095863_135096020_135097780
transcript_144356.known	chr9	+	1057	4	FSM	ENSG00000130558.20	ENST00000392991.8	1057	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	57.7484968539345	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTGCATTCTAAACTGAC	135086809	True	NA	-24	True	AAGAAA	-43	NA	135087673	135098065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135088140_135090194_135090345_135095863_135096020_135097780
transcript_144360.known	chr9	+	4951	4	FSM	ENSG00000196422.11	ENST00000356818.7	4951	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	20.9496751499609	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTACTGTTCTTTTTAAAT	135479244	True	NA	16	True	AATAAA	-16	NA	135479781	135488892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135480023_135482682_135482816_135483949_135484083_135484448
transcript_144366.known	chr9	+	1458	4	FSM	ENSG00000122140.11	ENST00000241600.10	1458	4	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	47.6864760702655	1718	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGGAGTTTGGGGCTCT	135487366	True	NA	14	True	AATAAA	-22	NA	135500681	135504671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135500754_135500997_135501124_135501843_135501974_135503541
transcript_144367.known	chr9	-	675	3	FSM	ENSG00000160345.13	ENST00000429260.7	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	8	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	-135498319	True	NA	-1	True	ATTAAA	-19	NA	135499869	135495180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135495616_135498584_135498664_135499708
transcript_144368.known	chr9	-	1278	3	FSM	ENSG00000160345.13	ENST00000371789.7	1278	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	63.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGTCTCGTCTGACGT	-135500421	True	NA	-1	True	ATTAAA	-19	NA	135500518	135495180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135495570_135498584_135498664_135499708
transcript_14437.nnic	chr1	-	1313	10	NNC	ENSG00000162813.18	novel	1152	11	NA	NA	6	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.4504822002373	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTTATTCACCAGC	-220088304	True	NA	-17	True	AATAAA	-14	NA	220089847	220057727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_220057918_220058817_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_144371.known	chr9	+	311	3	FSM	ENSG00000238058.2	ENST00000423793.1	311	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACACACACACACAAAGAT	135907562	True	NA	NA	False	NA	NA	NA	135907811	135913513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_135907876_135908651_135908789_135913403
transcript_144374.nnic	chr9	-	1709	10	NNC	ENSG00000130560.9	novel	838	6	NA	NA	-40	8298	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	180.591620329774	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTCCAGCTGTAACT	-135957814	False	NA	-16	True	AATAAA	-16	NA	135961252	135924670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_135925188_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_144375.known	chr9	-	1860	10	FSM	ENSG00000130560.9	ENST00000371756.4	1860	10	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	35.9468056926644	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTCTTCGTCTTTTC	-135957935	True	NA	-5	True	AATAAA	-14	NA	135961373	135932968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_135933516_135938221_135938361_135939672_135939760_135945027_135945251_135945888_135945998_135946268_135946372_135947797_135947906_135953679_135953754_135955294_135955416_135961024
transcript_144382.known	chr9	-	775	2	FSM	ENSG00000260193.1	ENST00000563018.1	775	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAACTCGAGTGCTGCTA	-136109404	False	52	NA	False	NA	NA	NA	136109424	136108104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136108820_136109364
transcript_144384.known	chr9	-	1274	1	FSM	ENSG00000260193.1	ENST00000566567.1	1274	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTCCTGCTCCCATAGT	-136109061	False	50	3	True	NA	NA	NA	136109081	136107807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136107800_136109100
transcript_144385.known	chr9	-	3096	3	FSM	ENSG00000213221.5	ENST00000371738.4	3096	3	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	28.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGCGGGGGGGCGCTACG	-136362073	True	NA	NA	False	AATAAA	-18	NA	136363744	136359482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136362181_136362988_136363129_136363486
transcript_144386.known	chr9	-	4060	13	FSM	ENSG00000187796.15	ENST00000481053.5	4060	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	123.445303902399	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATGCTGGGGCCTGTGGCCC	-136373632	False	NA	-9	True	AATAAA	-16	NA	136373644	136361902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136362181_136362988_136364402_136364482_136365218_136366799_136366846_136367215_136367258_136367636_136367977_136369749_136369876_136370293_136370438_136370521_136370702_136370840_136371146_136371323_136371462_136371894_136372095_136373531
transcript_144387.known	chr9	-	2111	13	FSM	ENSG00000187796.15	ENST00000371732.10	2111	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.623609564462324	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCGCTCGGACACTCGCG	-136373657	False	NA	NA	False	AATAAA	-19	NA	136373669	136363955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136364402_136364482_136364560_136365140_136365218_136366799_136366846_136367215_136367258_136367636_136367829_136369749_136369876_136370293_136370438_136370521_136370702_136370840_136371146_136371323_136371462_136371894_136372095_136373531
transcript_144389.nnic	chr9	-	375	3	NNC	ENSG00000165684.6	novel	2257	10	NA	NA	29	-3683	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	52.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCCCCAGAAATAACCAC	-136394112	True	NA	-8	True	ATTAAA	-19	NA	136400141	136396815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_136397024_136398298_136398438_136400113
transcript_144390.nic	chr9	-	445	3	ISM	ENSG00000165684.6	ENST00000682081.1	2257	10	-61	5800	-55	-3683	5prime_fragment	FALSE	canonical	3	67	junction_2	22.5	153	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTCCCCAGAAATAACCAC	-136400219	False	NA	-8	True	ATTAAA	-19	NA	136400231	136396815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_136397024_136398298_136398438_136400133
transcript_144391.known	chr9	-	626	6	FSM	ENSG00000165689.17	ENST00000417512.1	626	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	185.136706247032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCCAGTGTCGTGCCCTC	-136400541	False	NA	-6	True	AGTAAA	-14	NA	136407185	136402664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136402888_136404054_136404195_136404630_136404694_136405117_136405203_136405904_136405979_136407144
transcript_144397.known	chr9	+	2086	13	FSM	ENSG00000165688.12	ENST00000371717.8	2086	13	0	0	0	0	multi-exon	FALSE	canonical	3	762	junction_6	108.476155854127	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACGGTGTTTTCCTTCTCG	136403264	True	NA	26	True	AATAAA	-19	NA	136410657	136423761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290_136416392_136416950_136417215_136418016_136418110_136418554_136418674_136418827_136418919_136419043_136419107_136421831_136421977_136423094
transcript_144408.known	chr9	+	1174	6	FSM	ENSG00000165688.12	ENST00000612553.4	1174	6	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_5	64.1853565854393	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGCTGTCTTCAGTCAC	136403247	True	NA	NA	False	NA	NA	NA	136410640	136416904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809_136412893_136414552_136414648_136416290
transcript_144410.known	chr9	+	505	4	FSM	ENSG00000165688.12	ENST00000614402.4	505	4	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_2	56.938563381947	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGCCCCTCCCAGCGGG	136403280	True	NA	NA	False	NA	NA	NA	136410673	136412965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996_136412200_136412489_136412570_136412809
transcript_144412.known	chr9	+	416	3	FSM	ENSG00000165688.12	ENST00000619192.4	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_2	52.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGGATGTTTGAGATTT	136403250	True	NA	NA	False	NA	NA	NA	136410643	136412606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996_136412200_136412489
transcript_144413.known	chr9	+	590	2	FSM	ENSG00000165688.12	ENST00000620412.4	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	1136	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCGAGATATGAAGCGAAA	136403264	True	NA	NA	False	NA	NA	NA	136410657	136412504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136410740_136411996
transcript_144416.nnic	chr9	+	863	5	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-24	-150	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	10.8397416943394	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	136545480	True	NA	5	True	TATAAA	-16	NA	136546187	136549743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136546372_136547841_136548102_136548743_136548809_136549131_136549219_136549476
transcript_144417.nnic	chr9	+	845	5	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-75	-150	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_4	6.41774882649672	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	136545429	True	NA	5	True	TATAAA	-16	NA	136546136	136549743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136546372_136547841_136548102_136548743_136548809_136549131_136549219_136549545
transcript_144418.nnic	chr9	+	1172	4	NNC	ENSG00000237886.1	novel	738	3	NA	NA	-75	-150	intron_retention	FALSE	canonical	2	20	junction_1	3.55902608401044	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGAGGTTGGGCATTTTT	136545429	True	NA	5	True	TATAAA	-16	NA	136546136	136549743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136546372_136547841_136548102_136548743_136548809_136549131
transcript_144422.known	chr9	+	738	3	FSM	ENSG00000237886.1	ENST00000429224.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGCAGCTGTGGGAAC	136545504	True	NA	NA	False	NA	NA	NA	136546211	136549449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136546372_136547841_136548102_136549131
transcript_144424.known	chr9	+	1282	9	FSM	ENSG00000172889.16	ENST00000371698.3	1282	9	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	131.034108155091	1302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGTGTCAGTGGATGG	136660243	True	NA	NA	False	AATAAA	-13	NA	136665791	136672678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136665818_136668240_136668363_136668556_136668674_136669605_136669722_136669913_136670010_136670168_136670331_136670949_136671015_136671925_136672089_136672263
transcript_144438.known	chr9	-	1546	6	FSM	ENSG00000169692.13	ENST00000371696.7	1546	6	0	0	0	0	multi-exon	FALSE	canonical	2	356	junction_5	32.2738284063109	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGAGCTGTGGTCACTCA	-136683181	True	NA	-5	True	TATAAA	-19	NA	136687457	136673142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136673928_136674734_136674808_136676584_136676681_136676960_136677137_136677422_136677557_136687175
transcript_144439.known	chr9	+	2358	5	FSM	ENSG00000165716.11	ENST00000371692.9	2358	5	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_4	56.7951362354207	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGGTCTTAGGTTCCAG	136710808	True	NA	35	True	AATAAA	-40	NA	136712571	136724742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136712729_136717576_136717712_136721920_136722029_136722124_136722302_136722961
transcript_144440.known	chr9	-	789	5	FSM	ENSG00000233016.8	ENST00000416970.5	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	121.783362985262	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTCTTTAAGGATAATAT	-136720034	True	NA	-18	True	ATTAAA	-14	NA	136728184	136724657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136724940_136725054_136725111_136726310_136726417_136727045_136727087_136727880
transcript_144444.known	chr9	-	1123	4	FSM	ENSG00000233016.8	ENST00000653276.1	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	5.8878405775519	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTGGGCTGTTTCCTAG	-136720028	True	NA	-99	True	GGGGCT	-14	NA	136728178	136724432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136725111_136726310_136726417_136727045_136727087_136727880
transcript_144448.known	chr9	-	1995	6	FSM	ENSG00000187922.14	ENST00000497771.6	1995	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.49857113690718	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	-136742779	True	NA	-2	True	AATAAA	-21	NA	136742940	136738169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136740835_136740944_136741251_136741362_136741880_136742021_136742786
transcript_144451.known	chr9	-	615	5	FSM	ENSG00000187922.14	ENST00000527229.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.09267638593623	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	-136742798	True	NA	NA	False	NA	NA	NA	136742959	136739460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136741251_136741362_136741880_136742021_136742786
transcript_144452.known	chr9	-	443	4	FSM	ENSG00000187922.14	ENST00000532006.1	443	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.10960933531265	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGTCAAGTGGAGACCA	-136742798	True	NA	NA	False	NA	NA	NA	136742959	136739460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136741959_136742786
transcript_144453.known	chr9	-	1780	4	FSM	ENSG00000187922.14	ENST00000341040.11	1780	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.82842712474619	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGCCCGGGCAACAT	-136742779	True	NA	1	True	AATAAA	-24	NA	136742940	136738166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136739554_136739949_136740049_136741880_136742021_136742786
transcript_144454.nnic	chr9	-	1688	3	NIC	ENSG00000187922.14	novel	1995	6	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	4.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGGAGCCCGGGCAA	-136742830	True	NA	-2	True	AATAAA	-21	NA	136742991	136738169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_136739554_136739949_136740049_136742786
transcript_144455.known	chr9	-	767	7	FSM	ENSG00000177984.7	ENST00000316144.6	767	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCACCTCTTTGGAC	NA	False	NA	0	True	AATAAA	-18	NA	136764518	136759633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136759784_136761786_136761854_136762187_136762290_136763356_136763468_136763712_136763784_136763869_136764010_136764392
transcript_144457.nnic	chr9	-	435	4	NNC	ENSG00000177984.7	novel	767	7	NA	NA	1293	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCCTCACCTCTTTGGAC	NA	False	NA	0	True	AATAAA	-18	NA	136763171	136759633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_136759784_136761786_136761854_136762187_136762290_136763055
transcript_14446.known	chr1	-	2400	9	FSM	ENSG00000162813.18	ENST00000322067.12	2400	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.96869555732605	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGGTTTAAATTAACAG	-220088245	True	NA	NA	False	ATTAAA	-21	NA	220089788	220057481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220058993_220059685_220059792_220062756_220062955_220067301_220067394_220069383_220069433_220072849_220072958_220073966_220074072_220079726_220079855_220089685
transcript_144462.known	chr9	+	1580	8	FSM	ENSG00000196642.19	ENST00000371671.9	1580	8	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_7	172.926786442667	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCAGTCGTCAGATATTT	136800249	True	NA	11	True	AATAAA	-15	NA	136807942	136834340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136808327_136823524_136823660_136825778_136825827_136828493_136828547_136829392_136829485_136831720_136831862_136832264_136832371_136833719
transcript_144465.known	chr9	+	735	6	FSM	ENSG00000272896.1	ENST00000456614.2	735	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	156.975666904142	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCCTGACCACCGGCT	136787602	True	NA	NA	False	NA	NA	NA	136791378	136800595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136799101_136799224_136800001_136800170_136800388
transcript_144468.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000290079.9	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	44.1616349335031	3330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAACCTTTATTACCCT	136787567	True	NA	12	True	AAAACA	-30	NA	136791343	136793317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791710_136791778_136791946_136792031_136792250_136792359_136792818
transcript_144471.known	chr9	+	839	5	FSM	ENSG00000244187.8	ENST00000465017.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	138.378782694458	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787591	True	NA	27	True	AATAAA	-19	NA	136791367	136793256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791625_136791778_136791946_136792031_136792250_136792359_136792818
transcript_144474.known	chr9	+	551	4	FSM	ENSG00000244187.8	ENST00000489739.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	41.4755617469158	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCTGGAACACAGCCT	136787627	False	NA	NA	False	NA	NA	NA	136791403	136792869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791710_136791778_136791946_136792359_136792818
transcript_144478.known	chr9	+	491	4	FSM	ENSG00000244187.8	ENST00000479737.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	182.970550150078	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGCCGACCCTCCCCA	136787602	True	NA	NA	False	NA	NA	NA	136791378	136792902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791777_136792031_136792250_136792359_136792818
transcript_144479.known	chr9	+	683	4	FSM	ENSG00000244187.8	ENST00000483187.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	169.305115759159	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAAGTTTCCACCTGACC	136787595	True	NA	27	True	AATAAA	-19	NA	136791371	136793256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136791425_136791946_136792031_136792250_136792359_136792818
transcript_144490.known	chr9	+	985	5	FSM	ENSG00000054148.18	ENST00000371661.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1567.12555336195	1219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136848703	False	NA	4	True	ATTAAA	-13	NA	136848723	136851022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136848781_136849110_136849591_136850012_136850138_136850505_136850561_136850754
transcript_144505.known	chr9	+	577	3	FSM	ENSG00000054148.18	ENST00000247665.12	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_2	188.5	17965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCGGCTTCTGAACTCTGT	136819367	True	NA	6	True	ATTAAA	-15	NA	136849408	136851024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136849591_136850012_136850138_136850754
transcript_144513.known	chr9	+	627	2	FSM	ENSG00000054148.18	ENST00000463215.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	3446	junction_1	0	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136849628	False	NA	4	True	ATTAAA	-13	NA	136849778	136851022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136850138_136850754
transcript_144514.known	chr9	+	1316	3	FSM	ENSG00000054148.18	ENST00000492540.5	1316	3	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	1676.5	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCGGCTTCTGAACTCT	136849070	False	NA	4	True	ATTAAA	-13	NA	136849090	136851022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136849591_136850012_136850561_136850754
transcript_144515.known	chr9	+	618	4	FSM	ENSG00000054148.18	ENST00000497413.1	618	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	1647.42472429614	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTTCTGAACTCTGTCCT	136819384	True	NA	9	True	ATTAAA	-18	NA	136849425	136851027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136849591_136850012_136850138_136850505_136850561_136850754
transcript_144527.known	chr9	-	662	5	FSM	ENSG00000107223.13	ENST00000224073.6	662	5	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_1	149.47136013297	28072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-136847792	True	NA	-15	True	NA	NA	NA	136866308	136862118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136862346_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_144528.known	chr9	-	790	5	FSM	ENSG00000107223.13	ENST00000371649.5	790	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	810.257790767852	4576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGTTCTGCTGGCTGTTT	-136847769	True	NA	-15	True	NA	NA	NA	136866285	136862118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136862497_136862905_136863000_136863287_136863449_136863819_136863872_136866180
transcript_144533.known	chr9	+	2266	11	FSM	ENSG00000127191.18	ENST00000247668.7	2266	11	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	70.7814241167836	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCAGTGGCATCCATT	136882779	True	NA	12	True	ATTAAA	-14	NA	136886515	136926607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136886542_136898712_136898929_136899593_136899673_136900421_136900521_136908069_136908232_136909919_136909995_136916540_136916616_136920233_136920516_136921037_136921216_136923851_136924001_136925682
transcript_144543.known	chr9	-	2362	9	FSM	ENSG00000159069.14	ENST00000325285.8	2362	9	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_8	51.3771289096617	124	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTCCAGTCTCTGT	-136944541	False	197	-2	True	AATAAA	-16	NA	136944738	136940434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_136941172_136941250_136941464_136941536_136941685_136942045_136942467_136942546_136942696_136942768_136942944_136943348_136943507_136943890_136944107_136944593
transcript_144547.known	chr9	+	881	7	FSM	ENSG00000176919.13	ENST00000371634.7	881	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.25830573921179	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGACTCTTCTGTCCACT	136945230	False	NA	NA	False	ATTAAA	-15	NA	136945242	136946975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136945459_136945633_136945771_136945928_136946000_136946084_136946193_136946464_136946567_136946650_136946690_136946767
transcript_144551.known	chr9	+	754	6	FSM	ENSG00000107317.13	ENST00000492068.2	754	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	4.58693797647189	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTCAGGCTTCATCC	NA	False	NA	-40	True	NA	NA	NA	136978811	136981692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_144553.nnic	chr9	+	520	6	NNC	ENSG00000107317.13	novel	754	6	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.76933979345585	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGGCTCCTGGCTGTCT	136978822	True	NA	10	True	AATAAA	-20	NA	136978896	136981742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136978934_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_144558.known	chr9	+	812	7	FSM	ENSG00000107317.13	ENST00000371625.8	812	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.4189997387252	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGGCTCCTGGCTGTCT	NA	False	NA	10	True	AATAAA	-20	NA	136977503	136981742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136977693_136978992_136979133_136979222_136979300_136979945_136980063_136980182_136980285_136980832_136980856_136981578
transcript_144563.known	chr9	+	808	7	FSM	ENSG00000148362.11	ENST00000371620.4	808	7	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	71.7139378983534	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988525	True	NA	23	True	AATAAA	-18	NA	136992421	136993976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992639_136992701_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144564.nnic	chr9	+	781	7	NNC	ENSG00000148362.11	novel	808	7	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_3	128.93893903705	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988512	True	NA	23	True	AATAAA	-18	NA	136992408	136993976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136992563_136992639_136992701_136992924_136992975_136993092_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144568.nic	chr9	+	899	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-13	0	intron_retention	FALSE	canonical	3	189	junction_2	74.8534568340033	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988512	True	NA	23	True	AATAAA	-18	NA	136992408	136993976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_136992563_136992639_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144569.nnic	chr9	+	771	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	141.791396071835	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988512	True	NA	23	True	AATAAA	-18	NA	136992408	136993976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_136992563_136992639_136992701_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144571.known	chr9	+	958	6	FSM	ENSG00000148362.11	ENST00000493968.5	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	53.8961965262856	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGGCTCTGGTGGGGCT	136988594	False	NA	18	True	AATAAA	-13	NA	136992490	136993971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992639_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144576.nic	chr9	+	755	6	NIC	ENSG00000148362.11	novel	808	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	134.181369794767	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988517	True	NA	23	True	AATAAA	-18	NA	136992413	136993976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_136992563_136992924_136992975_136993052_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144577.nnic	chr9	+	715	6	NNC	ENSG00000148362.11	novel	808	7	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	169.914802180387	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTCTGGTGGGGCTCTGAC	136988517	True	NA	23	True	AATAAA	-18	NA	136992413	136993976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_+_136992563_136992924_136992975_136993092_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144580.known	chr9	+	1077	5	FSM	ENSG00000148362.11	ENST00000498095.4	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	44.8441746495573	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCTCTGACTCCTGGCA	136988566	True	NA	31	True	AATAAA	-26	NA	136992462	136993984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992639_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144582.known	chr9	+	705	5	FSM	ENSG00000148362.11	ENST00000483807.5	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	149.53260514015	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCCGCCACCACCTCCAC	136988550	True	NA	-72	True	NA	NA	NA	136992446	136993881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992563_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144583.known	chr9	+	744	5	FSM	ENSG00000148362.11	ENST00000467845.5	744	5	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	81.3153583279321	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTCTGGTGGGGCTCTGA	136992600	False	NA	22	True	AATAAA	-17	NA	136992639	136993975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_136992701_136992924_136993244_136993342_136993412_136993579_136993665_136993765
transcript_144584.known	chr9	-	2187	8	FSM	ENSG00000107281.10	ENST00000371600.7	2187	8	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_6	12.5860304808667	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTTCTGCCTGTGT	-137043721	False	NA	-18	True	ATTAAA	-13	NA	137044092	137039469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137039865_137039970_137040068_137040356_137040437_137040513_137040599_137040670_137040738_137040813_137040985_137041061_137041188_137042926
transcript_144585.nic	chr9	-	1810	4	ISM	ENSG00000054179.12	ENST00000355097.7	2102	9	2977	0	-1471	0	intron_retention	FALSE	canonical	2	9	junction_1	2.44948974278318	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGTGAAAGGAGAGTGTCT	-137050713	False	NA	-7	True	AATAAA	-15	NA	137051084	137048106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_137048861_137048940_137049076_137049869_137049990_137050283
transcript_144587.known	chr9	+	2693	13	FSM	ENSG00000177239.16	ENST00000683987.1	2693	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	85.6470064988977	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACCGCGATGTCGCCTGTG	137082201	True	NA	5	True	GATAAA	-14	NA	137086984	137109180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107541_137107663_137108387
transcript_144588.known	chr9	+	2698	13	FSM	ENSG00000177239.16	ENST00000682881.1	2698	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	84.1470274116812	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTGTGTCTTTAGGG	137086846	False	NA	14	True	GATAAA	-23	NA	137086856	137109189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107448_137107530_137107663_137108530
transcript_144589.known	chr9	+	2755	13	FSM	ENSG00000177239.16	ENST00000683135.1	2755	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_10	82.8413393179999	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAACCGCGATGTCGC	137086825	False	NA	0	True	GATAAA	-9	NA	137086903	137109175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107274_137107448_137107530_137107663_137108387
transcript_144590.known	chr9	+	2792	12	FSM	ENSG00000177239.16	ENST00000684229.1	2792	12	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_9	25.874777916562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGATAAAAGTTGATTTG	137082173	True	NA	-18	True	NA	NA	NA	137086956	137109157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137087219_137088074_137088184_137088868_137089006_137096236_137096392_137097827_137097938_137099695_137099882_137101004_137101154_137101483_137101673_137106124_137106316_137106688_137106810_137107249_137107663_137108387
transcript_144591.known	chr9	-	1601	13	FSM	ENSG00000176978.14	ENST00000371579.7	1601	13	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	29.1836855109152	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTATGTCCCGTCCTTCC	-137113733	True	NA	-6	True	AATAAA	-17	NA	137114733	137110545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137110784_137110879_137110951_137111689_137111755_137111872_137112030_137112111_137112231_137112744_137112806_137112952_137113120_137113205_137113288_137113360_137113497_137113864_137114029_137114242_137114383_137114462_137114577_137114646
transcript_144598.known	chr9	-	2655	13	FSM	ENSG00000176248.9	ENST00000323927.3	2655	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	12.6301557129488	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTCTGTCCTGGTGGCTT	-137184227	True	NA	-1	True	ATTAAA	-16	NA	137188560	137174783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137175155_137175236_137175473_137175707_137175838_137180180_137180385_137180451_137180528_137180787_137180930_137181680_137181863_137183124_137183243_137183671_137183792_137184912_137185088_137186223_137186357_137187480_137188104_137188415
transcript_1446.nic	chr1	-	1718	4	FSM	ENSG00000007923.17	ENST00000693337.1	1512	4	-1	-205	0	205	multi-exon	FALSE	canonical	3	880	junction_1	63.1259763400843	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAGAAAA	-6679117	True	NA	NA	False	NA	NA	NA	6701823	6666391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6667811_6678393_6678468_6680907_6681038_6701728
transcript_144609.known	chr9	+	863	3	FSM	ENSG00000176101.12	ENST00000322310.10	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_1	104	6070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGTGCCAGCCTGCTGC	137177340	True	NA	9	True	AATAAA	-16	NA	137188675	137190366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137188779_137189065_137189266_137189806
transcript_144610.known	chr9	+	723	3	FSM	ENSG00000176101.12	ENST00000464553.2	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	380	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177370	True	NA	13	True	AATAAA	-20	NA	137188705	137190370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137188779_137189065_137189152_137189806
transcript_144611.known	chr9	+	1170	2	FSM	ENSG00000176101.12	ENST00000459860.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_1	0	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCCAGCCTGCTGCTTGC	137177324	True	NA	13	True	AATAAA	-20	NA	137188659	137190370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137189266_137189806
transcript_144612.known	chr9	-	2659	4	FSM	ENSG00000176058.13	ENST00000409012.6	2659	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	12.7540843131393	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGTGTCCCCACTGCG	-137196284	False	4457	-13	True	AATAAA	-16	NA	137200741	137191618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137192175_137192258_137192366_137192450_137192692_137198986
transcript_144613.known	chr9	-	1567	1	FSM	ENSG00000187713.7	ENST00000343666.6	1567	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATAGTGGTTGCCTGTAA	-137201191	True	NA	NA	False	AATAAA	-23	NA	137205648	137204081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137204100_137205600
transcript_144614.known	chr9	+	4817	14	FSM	ENSG00000188566.15	ENST00000684003.1	4817	14	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	14.6767940649063	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATTGTTACTACTTGTC	137200389	True	NA	6	True	AATAAA	-15	NA	137205699	137219361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215406_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_144615.known	chr9	+	1829	14	FSM	ENSG00000188566.15	ENST00000458322.2	1829	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	34.6140170670033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCATCCTCCTGGGAGCC	137200439	True	NA	NA	False	NA	NA	NA	137205749	137216444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137205913_137206231_137206310_137212501_137212600_137213779_137213879_137213966_137214069_137214203_137214414_137214569_137214692_137214797_137215019_137215094_137215203_137215427_137215522_137215658_137215806_137215898_137216018_137216093_137216189_137216271
transcript_144619.known	chr9	+	762	2	FSM	ENSG00000197191.6	ENST00000650725.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTTTGCTGCAGGCTC	137224947	True	NA	12	True	AATAAA	-25	NA	137225173	137226315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137225234_137225613
transcript_144621.known	chr9	+	1563	4	FSM	ENSG00000188229.6	ENST00000340384.5	1563	4	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	88.3037686373325	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTCGCTTTGCCCAT	137223252	True	NA	21	True	ATTAAA	-15	NA	137241286	137243707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137241418_137241720_137241830_137241910_137242022_137242495
transcript_144622.known	chr9	+	2035	3	FSM	ENSG00000188229.6	ENST00000604929.1	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_1	64	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGTTTCGCTTTGCCCA	137223253	True	NA	20	True	ATTAAA	-14	NA	137241287	137243706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137241418_137241720_137241830_137241910
transcript_144624.known	chr9	+	2540	13	FSM	ENSG00000188986.9	ENST00000343053.6	2540	13	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_8	60.8725900732195	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAGGCTGAGATGTCTC	137251217	True	NA	15	True	AATAAA	-16	NA	137255326	137273542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137255612_137255906_137256071_137256328_137256429_137256823_137257055_137263036_137263223_137264244_137264358_137265876_137265980_137266330_137266427_137266943_137267087_137267239_137267347_137272080_137272223_137272506_137272616_137272781
transcript_14463.nnic	chr1	-	480	3	NIC	ENSG00000162813.18	novel	1152	11	NA	NA	6	3	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	27.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTTATTCACCAGC	-220088304	True	NA	-17	True	AATAAA	-14	NA	220089847	220057727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_220057918_220079726_220079855_220089685
transcript_144632.nnic	chr9	-	977	9	NNC	ENSG00000187609.16	novel	1432	11	NA	NA	-10	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	36.4037686922659	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421622	True	NA	-5	True	AATAAA	-14	NA	137423172	137366144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383352_137384168_137384193_137395302_137395405_137423113
transcript_144633.nnic	chr9	-	898	8	NNC	ENSG00000187609.16	novel	1432	11	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	29.6496549864636	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421687	True	NA	-5	True	AATAAA	-14	NA	137423237	137366144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_137366216_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_144636.known	chr9	-	962	8	FSM	ENSG00000187609.16	ENST00000479452.5	962	8	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_1	12.4638252063927	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421605	True	NA	-5	True	AATAAA	-14	NA	137423155	137366144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137366362_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_14464.known	chr1	+	3530	23	FSM	ENSG00000067704.10	ENST00000366922.3	3530	23	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_8	48.5148865285289	882	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTGATTTTGGTGCAGA	220085146	True	NA	14	True	AATAAA	-18	NA	220094131	220148041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_220094484_220096103_220096227_220100489_220100650_220102128_220102278_220102362_220102413_220102494_220102605_220102686_220102778_220103446_220103563_220105890_220106061_220107060_220107152_220110785_220110938_220114313_220114475_220125236_220125340_220126749_220126844_220134401_220134511_220136808_220136912_220137917_220138044_220139007_220139140_220140182_220140290_220141802_220141949_220142943_220143135_220145508_220145654_220147492
transcript_144641.nic	chr9	-	1175	7	ISM	ENSG00000187609.16	ENST00000340951.9	2781	22	-75	59249	-26	0	5prime_fragment	FALSE	canonical	2	65	junction_5	11.8977121983832	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTGTGTGACGTCTGTC	-137421687	True	NA	-5	True	AATAAA	-14	NA	137423237	137366144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_-_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_144644.nnic	chr9	-	640	3	NNC	ENSG00000187609.16	novel	2781	22	NA	NA	-26	6280	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	43.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTTTGTTTATTGTGA	-137421687	True	NA	NA	False	AATAAA	-27	NA	137423237	137385521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr9_-_137385936_137395302_137395405_137423113
transcript_144645.known	chr9	-	1585	3	FSM	ENSG00000187609.16	ENST00000465160.2	1585	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGCGCAGTTGAGGTCAG	-137421612	True	NA	-2	True	AATAAA	-21	NA	137423162	137391801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137393236_137395302_137395405_137423113
transcript_144646.known	chr9	-	2781	22	FSM	ENSG00000187609.16	ENST00000340951.9	2781	22	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	34.5708382476164	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGGCTCACATGTTTCAT	-137421612	True	NA	-1	True	AATAAA	-37	NA	137423162	137306895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137307264_137307607_137307647_137309606_137309701_137323724_137323857_137324089_137324144_137348070_137348239_137349109_137349283_137349368_137349532_137351037_137351148_137351317_137351529_137352065_137352202_137352619_137352787_137354338_137354378_137354699_137354774_137356267_137356369_137366492_137366633_137367935_137367990_137372904_137373073_137373425_137373600_137383312_137383378_137395302_137395405_137423113
transcript_144647.known	chr9	+	1614	14	FSM	ENSG00000188747.9	ENST00000683555.1	1614	14	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	5.70891548162445	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCACCCTCCAAGTGGGT	137423131	True	NA	7	True	AATAAA	-17	NA	137423392	137434406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137423707_137426247_137426331_137428032_137428142_137428881_137429017_137429275_137429384_137430783_137430844_137431074_137431101_137431235_137431342_137433028_137433075_137433204_137433264_137433452_137433608_137433749_137433865_137433964_137434080_137434223
transcript_144648.known	chr9	+	582	2	FSM	ENSG00000182154.8	ENST00000371443.6	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	2190	junction_1	0	1395	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGGTGTTTGTTTTTTGGC	137525080	True	NA	18	True	ATTAAA	-16	NA	137551878	137552555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137551979_137552073
transcript_144651.nic	chr9	-	1636	9	NIC	ENSG00000148399.13	novel	2302	9	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_8	71.9382330544753	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGAGTTTATAACATGTTT	-137575139	False	NA	-9	True	ATTAAA	-18	NA	137578604	137554903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578509
transcript_144652.known	chr9	-	2302	9	FSM	ENSG00000148399.13	ENST00000277540.7	2302	9	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_7	41.6863286941894	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGACAACCAGTTACAG	-137575460	True	NA	NA	False	AATAAA	-19	NA	137578925	137554443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137555649_137564433_137564607_137564892_137564959_137565084_137565155_137574207_137574381_137574751_137574844_137576079_137576168_137577469_137577604_137578624
transcript_14466.nic	chr1	+	439	2	ISM	ENSG00000067704.10	ENST00000366922.3	3530	23	-41	51892	-41	-38697	5prime_fragment	FALSE	canonical	3	578	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGACAGAATTTTGCCTT	NA	False	NA	NA	False	AAGAAA	-3	NA	220094090	220096149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_220094484_220096103
transcript_14467.known	chr1	-	388	1	FSM	ENSG00000232134.1	ENST00000419498.1	388	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAGGGATGTAATACATA	-220144334	False	NA	NA	False	AAAACA	-29	NA	220144351	220143963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220144000_220144400
transcript_144672.known	chr9	+	1556	8	FSM	ENSG00000197070.14	ENST00000371421.9	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_4	36.8776244309943	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCACCGGCCTCG	137601030	True	NA	12	True	AATAAA	-17	NA	137605685	137615360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558_137615001_137615073
transcript_14468.known	chr1	-	7256	35	FSM	ENSG00000118873.17	ENST00000358951.7	7256	35	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	32.4873811009113	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTTCCTAAACATTCA	-220264973	True	NA	-38	True	AATAAA	-14	NA	220272453	220148292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220151407_220151605_220151765_220153184_220153407_220153967_220154058_220157269_220157489_220157801_220157877_220159385_220159422_220162197_220162269_220164732_220164800_220167292_220167400_220167501_220167676_220170891_220171121_220171888_220172050_220172636_220172743_220182256_220182355_220182717_220182932_220184035_220184164_220185650_220185742_220189702_220189768_220190063_220190147_220190376_220190521_220191067_220191285_220193239_220193380_220195077_220195168_220195297_220195378_220196249_220196399_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_144683.nic	chr9	+	1645	7	ISM	ENSG00000197070.14	ENST00000371421.9	1556	8	-17	1	-16	0	intron_retention	FALSE	canonical	3	226	junction_4	39.8315899200064	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGGGCCTCACCGGCCTC	137601013	True	NA	11	True	AATAAA	-16	NA	137605668	137615359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_137605836_137612895_137613007_137613459_137613511_137613614_137613770_137614031_137614215_137614298_137614476_137614558
transcript_144692.known	chr9	-	1825	2	FSM	ENSG00000203993.7	ENST00000496793.3	1841	2	0	16	0	-16	multi-exon	FALSE	canonical	3	209	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTACAGGAGTTG	-137618887	False	NA	-16	True	AATAAA	-2	NA	137618906	137615347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137616200_137617933
transcript_144693.known	chr9	-	1409	3	FSM	ENSG00000203993.7	ENST00000371417.4	1480	3	65	6	18	0	multi-exon	FALSE	canonical	2	116	junction_2	46.5	708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCCAGGTCCCAG	-137617133	True	NA	0	True	AATAAA	-18	NA	137618813	137615331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_-_137616200_137617933_137618192_137618530
transcript_144697.nic	chr9	+	1120	3	ISM	ENSG00000181090.21	ENST00000629335.2	3600	10	-26	47139	-5	568	5prime_fragment	FALSE	canonical	3	356	junction_1	58	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAGATGCTGCTA	137604808	True	NA	NA	False	NA	NA	NA	137618986	137717618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr9_+_137619050_137710966_137711031_137716625
transcript_144699.known	chr9	+	691	5	FSM	ENSG00000181090.21	ENST00000482340.5	691	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	253.588741863672	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAACACTTCATTAATTT	137788782	False	NA	NA	False	ATTAAA	-23	NA	137788810	137803199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137788829_137790847_137790971_137798812_137798915_137800879_137800985_137802856
transcript_1447.known	chr1	-	745	4	FSM	ENSG00000007923.17	ENST00000465911.1	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	452.607998161765	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGTAATATCTTATTTAT	-6679113	True	NA	NA	False	AATAAA	-16	NA	6701819	6670460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_6670911_6678393_6678468_6680907_6681038_6701728
transcript_144700.known	chr9	+	2707	16	FSM	ENSG00000181090.21	ENST00000462484.5	2707	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	146.98335506671	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGCCTTTTGAAGCCA	137604813	True	NA	NA	False	AATAAA	-17	NA	137618991	137784393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_137619050_137710966_137711031_137716625_137717183_137728348_137728530_137743370_137743529_137743901_137744091_137752330_137752409_137754170_137754292_137757879_137758012_137762674_137762821_137775108_137775253_137776617_137776845_137777881_137778056_137779634_137779718_137782290_137782398_137784105
transcript_144705.nic	chr9	+	2505	5	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	18.4847910456137	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150021	False	NA	25	True	AATAAA	-15	NA	138150077	138177433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_138150309_138174045_138174873_138175362_138175472_138175600_138175712_138176206
transcript_144706.known	chr9	+	1735	5	FSM	ENSG00000159247.13	ENST00000503395.5	1735	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	21.2720473861826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACGCAGATGAGACCTT	138149458	True	NA	NA	False	NA	NA	NA	138150112	138176508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr9_+_138150309_138174045_138174873_138175362_138175472_138175600_138175902_138176206
transcript_144710.nnic	chr9	+	1691	4	NIC	ENSG00000159247.13	novel	1735	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	21.2759645296439	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTTCACCTCCATCTT	138150008	False	NA	25	True	AATAAA	-15	NA	138150064	138177433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr9_+_138150309_138175362_138175472_138175600_138175712_138176206
transcript_14472.nnic	chr1	-	1166	10	FSM	ENSG00000118873.17	ENST00000689820.1	1135	10	-30	-1	10	1	multi-exon	FALSE	canonical	3	3	junction_1	50.2880591083896	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTCTACTTTTT	-220264993	True	NA	1	True	AATAAA	-17	NA	220272473	220200720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220200940_220202275_220202375_220205906_220206007_220210387_220210490_220210800_220210877_220210954_220211003_220212886_220212969_220213855_220213980_220232798_220232864_220272222
transcript_144720.known	chrM	+	954	1	FSM	ENSG00000211459.2	ENST00000389680.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAGTGTAGCTTAACACAA	-105703	True	NA	NA	False	NA	NA	NA	647	1601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_600_1600
transcript_144721.known	chrM	+	1559	1	FSM	ENSG00000210082.2	ENST00000387347.2	1559	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1933	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAAGATGGCAGAGCCCGG	-5784	False	NA	NA	False	NA	NA	NA	1670	3229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_1700_3200
transcript_144722.known	chrM	+	956	1	FSM	ENSG00000198888.2	ENST00000361390.2	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1252	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATATGTCTGATAAAAG	3041	False	NA	NA	False	NA	NA	NA	3306	4262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_3300_4300
transcript_144723.known	chrM	+	1042	1	FSM	ENSG00000198763.3	ENST00000361453.3	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1510	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAATTTAGGTTAAATACA	4024	False	NA	NA	False	NA	NA	NA	4469	5511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_4500_5500
transcript_144724.known	chrM	-	66	1	FSM	ENSG00000210140.1	ENST00000387405.1	66	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTTTTTTCCCGGC	NA	False	NA	NA	False	GGGGCT	-2	NA	5826	5760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_-_5800_5800
transcript_144725.known	chrM	+	1542	1	FSM	ENSG00000198804.2	ENST00000361624.2	1542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAGGAAGGAATCGAA	-93	True	NA	NA	False	CATAAA	-8	NA	5903	7445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_5900_7400
transcript_144726.known	chrM	+	684	1	FSM	ENSG00000198712.1	ENST00000361739.1	684	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4532	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCTCTACCCCCTCTA	1651	True	NA	NA	False	NA	NA	NA	7585	8269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_7600_8300
transcript_144727.known	chrM	+	681	1	FSM	ENSG00000198899.2	ENST00000361899.2	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2323	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	8201	False	NA	NA	False	NA	NA	NA	8526	9207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_8500_9200
transcript_144728.known	chrM	+	207	1	FSM	ENSG00000228253.1	ENST00000361851.1	207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCGCCGCAGTACTG	867	True	NA	NA	False	AATGAA	-42	NA	8365	8572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_8400_8600
transcript_144729.known	chrM	+	784	1	FSM	ENSG00000198938.2	ENST00000362079.2	784	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2444	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCTTTTAGTATAAATAGT	4564	True	NA	NA	False	NA	NA	NA	9206	9990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_9200_10000
transcript_144730.known	chrM	+	346	1	FSM	ENSG00000198840.2	ENST00000361227.2	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	830	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTATATAGTTTAAACAAA	8743	False	NA	NA	False	AAAAAG	-19	NA	10058	10404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_10100_10400
transcript_144731.known	chrM	+	297	1	FSM	ENSG00000212907.2	ENST00000361335.1	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTAATCGTCCCAACAATT	-1540	True	NA	NA	False	NA	NA	NA	10469	10766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_10500_10800
transcript_144732.known	chrM	+	1378	1	FSM	ENSG00000198886.2	ENST00000361381.2	1378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATAGTTTAACCAAA	-421	False	NA	NA	False	NA	NA	NA	10759	12137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_10800_12100
transcript_144733.known	chrM	+	1812	1	FSM	ENSG00000198786.2	ENST00000361567.2	1812	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	121	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTCCCCCGAGCAATCT	10068	True	NA	NA	False	NA	NA	NA	12336	14148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_12300_14100
transcript_144734.known	chrM	+	1141	1	FSM	ENSG00000198727.2	ENST00000361789.2	1141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	984	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTGTAGTATAAACTAA	14461	False	NA	NA	False	AAAACA	-19	NA	14746	15887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrM_+_14700_15900
transcript_14474.known	chr1	-	1906	2	FSM	ENSG00000118873.17	ENST00000462353.1	1906	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGAAGTCTGGTCTTAC	-220264881	True	NA	-8	True	AGTAAA	-15	NA	220272361	220265984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_220267752_220272222
transcript_144740.known	chrX	+	5287	8	FSM	ENSG00000182378.15	ENST00000399012.6	5287	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	67.9720831049973	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGAGTATGAATTTTA	274682	True	NA	10	True	AATAAA	-18	NA	276321	303353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_276395_281481_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_144742.nnic	chrX	+	2137	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_7	55.1476681839083	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299393_302592
transcript_144743.nnic	chrX	+	1967	8	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	73.7635494298491	85	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096_299459_302828
transcript_144755.known	chrX	+	5318	7	FSM	ENSG00000182378.15	ENST00000381657.8	5318	7	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	17.4706102418382	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276726	True	NA	13	True	AATAAA	-21	NA	281380	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034_293219_299096
transcript_14476.nnic	chr1	+	772	5	NNC	ENSG00000117791.16	novel	699	3	NA	NA	-9559	7	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	15.0332963783729	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGCAAAAATGTTTTTAAA	NA	False	NA	NA	False	AATAAA	-26	NA	220770402	220784247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_220770557_220780017_220780080_220780167_220780240_220781777_220781933_220783918
transcript_144760.nic	chrX	+	1343	6	ISM	ENSG00000182378.15	ENST00000381657.8	5318	7	-19	9872	-19	1845	5prime_fragment	FALSE	canonical	3	181	junction_1	18.3150211575089	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGGTTCATGCCTGTC	276707	True	NA	2	True	AATAAA	-15	NA	281361	293484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_281685_284166_284315_288732_288870_290647_290777_291498_291655_293034
transcript_144762.nic	chrX	+	1071	6	NIC	ENSG00000182378.15	novel	587	5	NA	NA	5	1845	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	80.1214078757981	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAGTGGTTCATGCCTGTC	282827	True	NA	2	True	AATAAA	-15	NA	283469	293484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_283521_284166_284315_288732_288870_290647_290777_291498_291655_293034
transcript_144764.nnic	chrX	+	936	4	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	81.6129074758807	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276119	False	NA	13	True	AATAAA	-21	NA	276312	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_276395_281481_281685_284166_284287_302825
transcript_144766.nnic	chrX	+	952	4	NNC	ENSG00000182378.15	novel	5287	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	81.6129074758807	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276119	False	NA	13	True	AATAAA	-21	NA	276312	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_276395_281481_281685_284166_284315_302837
transcript_144770.nnic	chrX	+	974	3	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	90.5	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284287_302825
transcript_144771.nnic	chrX	+	990	3	NNC	ENSG00000182378.15	novel	5318	7	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	90.5	115	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAGTATGAATTTTATTA	276707	True	NA	13	True	AATAAA	-21	NA	281361	303356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_281685_284166_284315_302837
transcript_144774.known	chrX	-	1907	10	FSM	ENSG00000178605.13	ENST00000326153.9	1907	10	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_8	33.1588023432618	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCATTTCCAGTTCCTCC	NA	False	NA	-5	True	ATTAAA	-22	NA	318819	304749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_305198_307359_307513_307731_307881_311418_311628_312765_312925_314149_314218_314889_315021_315228_315300_316913_317052_318438
transcript_14478.known	chr1	-	2589	4	FSM	ENSG00000143507.18	ENST00000366899.4	2589	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGGATGTGTCTTTTTTT	-221741903	True	NA	NA	False	TATAAA	-10	NA	221742089	221701423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_221702678_221706094_221706467_221738933_221739788_221741980
transcript_144780.nnic	chrX	+	1217	7	NNC	ENSG00000185291.12	novel	1476	10	NA	NA	18521	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.03442593595562	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGTCCCGGTCTCTG	NA	False	NA	NA	False	GATAAA	-24	NA	1355316	1382689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_1355789_1356220_1356337_1358860_1358888_1365137_1365253_1378658_1378765_1381022_1381105_1382390
transcript_1448.nnic	chr1	-	518	4	NNC	ENSG00000007923.17	novel	1357	8	NA	NA	34	-1716	at_least_one_novel_splicesite	FALSE	canonical	3	59	junction_1	449.779946195915	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCCTGTTGAATAGAACAC	-6679184	True	NA	2	True	ATTAAA	-22	NA	6701890	6672176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_6672329_6678393_6678468_6680907_6681038_6701728
transcript_144801.known	chrX	-	1451	4	FSM	ENSG00000169100.14	ENST00000381401.11	1451	4	0	0	0	0	multi-exon	FALSE	canonical	3	4968	junction_3	246.725668619128	33213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCCTGGCCACGCACC	NA	False	NA	-27	True	AATAAA	-18	NA	1392113	1386151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1386760_1387278_1387420_1389240_1389728_1391898
transcript_144807.known	chrX	-	2065	13	FSM	ENSG00000169093.16	ENST00000381317.9	2065	13	0	0	0	0	multi-exon	TRUE	canonical	1	187	junction_11	84.1966530741507	617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCCTCCTCCATAGGG	NA	False	NA	-2	True	AATAAA	-16	NA	1452909	1403138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_144810.known	chrX	-	2035	12	FSM	ENSG00000169093.16	ENST00000381333.9	2035	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	137.164436515549	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	NA	False	NA	-4	True	AATAAA	-14	NA	1452929	1403140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1442185_1442318_1452747
transcript_144811.nnic	chrX	-	2052	12	NIC	ENSG00000169093.16	novel	2065	13	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	1	24	junction_9	146.185606011531	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCTGCCTCCTCCATAG	NA	False	NA	-4	True	AATAAA	-14	NA	1452963	1403140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_1403490_1412731_1412855_1417972_1418117_1418981_1419115_1421657_1421843_1425524_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1439096_1439145_1442185_1442318_1452747
transcript_14482.nnic	chr1	+	661	2	NNC	ENSG00000228437.5	novel	455	3	NA	NA	-92	-11554	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	221966107	True	NA	5	True	AATAAA	-16	NA	221966248	221971589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_221966503_221971182
transcript_144824.nic	chrX	-	1479	8	ISM	ENSG00000169093.16	ENST00000381317.9	2065	13	-54	22090	-34	2498	5prime_fragment	FALSE	canonical	1	187	junction_6	105.599551637886	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTAGTTGCTTATTTA	NA	False	NA	-3	True	NA	NA	NA	1452963	1425228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_1425688_1427733_1428122_1432268_1432378_1435021_1435084_1435693_1435759_1439096_1439145_1442185_1442318_1452747
transcript_14483.nnic	chr1	-	1969	12	NNC	ENSG00000143498.18	novel	1910	11	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_5	22.1583333203829	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588759	False	NA	-3	True	AATAAA	-24	NA	222589940	222558311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222566473_222566526_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_144830.known	chrX	-	851	2	FSM	ENSG00000169093.16	ENST00000474865.6	851	2	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATAATCTCTTGTGGCCG	NA	False	NA	NA	False	NA	NA	NA	1452872	1441591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_1442318_1452747
transcript_144831.known	chrX	+	553	3	FSM	ENSG00000236017.8	ENST00000419737.7	553	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCTGGAGATGGGATCAT	1403442	False	NA	11	True	GATAAA	-23	NA	1403458	1414028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1403586_1412742_1412889_1413748
transcript_144832.known	chrX	+	1087	8	FSM	ENSG00000196433.13	ENST00000381229.9	1087	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.35526185435788	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGGAACTAACGTCAAAGC	1615110	True	NA	NA	False	NA	NA	NA	1615163	1643027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1633149_1633291_1636437_1636561_1642802
transcript_144833.known	chrX	+	989	7	FSM	ENSG00000196433.13	ENST00000381233.8	989	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5723301886761	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTCTTGTTCTTGGTG	1615121	False	NA	NA	False	AATAAA	-15	NA	1615174	1643081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1636437_1636561_1642802
transcript_144834.nic	chrX	+	1025	6	ISM	ENSG00000196433.13	ENST00000381241.9	1330	9	-3	10059	-3	-3441	5prime_fragment	FALSE	canonical	0	0	junction_2	1.62480768092719	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGACCAGACATGGCGGAAG	1615002	True	NA	NA	False	AATAAA	-10	NA	1615055	1633022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_1615269_1623138_1623314_1624268_1624399_1627702_1627772_1629820_1629940_1632703
transcript_144835.nic	chrX	-	1401	8	NIC	ENSG00000169084.15	novel	2579	7	NA	NA	29	-1254	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	99.2122030018979	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCATTTTCCTTGCCGC	NA	False	NA	-12	True	CATAAA	-23	NA	2500931	2220759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2392353_2392475_2408744_2408814_2425196_2425305_2500816
transcript_144838.known	chrX	-	2579	7	FSM	ENSG00000169084.15	ENST00000334651.11	2579	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_6	58.6451191489965	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCATCCTCCGGGAATG	NA	False	NA	NA	False	AATAAA	-30	NA	2500976	2219505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2221230_2243022_2243231_2266739_2266948_2291501_2291604_2408744_2408814_2425196_2425305_2500816
transcript_144844.known	chrX	-	490	4	FSM	ENSG00000169084.15	ENST00000430536.7	490	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.5641359161074	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAAGGAAGCTCTGCTG	NA	False	NA	NA	False	NA	NA	NA	2500960	2337830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2338000_2408744_2408814_2425196_2425305_2500816
transcript_144847.nnic	chrX	-	1348	2	FSM	ENSG00000289007.1	ENST00000686824.1	1371	2	18	5	2	0	multi-exon	FALSE	canonical	2	16	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTCAGGTGCACCTCT	NA	False	NA	-2	True	AATAAA	-17	NA	2609189	2566028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2567293_2609105
transcript_144850.known	chrX	+	573	11	FSM	ENSG00000002586.20	ENST00000623253.4	573	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	300.929493403355	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGATTGTCGGCAGAAACAG	2691302	False	NA	NA	False	NA	NA	NA	2691360	2740804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2733356_2733375_2738202_2738257_2740778
transcript_144855.known	chrX	+	1089	10	FSM	ENSG00000002586.20	ENST00000624481.4	1089	10	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_8	199.353399213	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAATTAGAAACCAAG	2683423	False	NA	-8	True	NA	NA	NA	2691312	2741290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2691428_2714421_2714455_2717604_2717653_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738202_2738257_2740778
transcript_144866.known	chrX	+	892	9	FSM	ENSG00000002586.20	ENST00000381187.8	892	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	229.837986416519	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACCCCACCGAGGCACCC	2683386	True	NA	NA	False	NA	NA	NA	2691275	2741101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2691428_2714421_2714455_2719660_2719706_2720355_2720425_2722626_2722675_2723313_2723365_2726259_2726374_2738199_2738257_2740778
transcript_144869.known	chrX	+	583	3	FSM	ENSG00000002586.20	ENST00000647297.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	5.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAACCTCCACCTCCCGGGT	2683402	True	NA	NA	False	NA	NA	NA	2691291	2718018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2691428_2714421_2714455_2717604
transcript_144872.known	chrX	+	2313	10	FSM	ENSG00000124343.14	ENST00000381174.10	2313	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.2282590869912	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTGATTATTGAATA	2752035	True	NA	NA	False	AATAAA	-17	NA	2752051	2815927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2752336_2770549_2770592_2774715_2774740_2782065_2782129_2789643_2789707_2794534_2794604_2797309_2797361_2808184_2808221_2811335_2811453_2814363
transcript_144874.nnic	chrX	+	471	6	NNC	ENSG00000124343.14	novel	313	3	NA	NA	-583	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	9.53729521405309	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATTTCCTTTTATTCT	2793934	False	NA	16	True	ACTAAA	-26	NA	2793951	2814447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_2794066_2794534_2794604_2797309_2797361_2808184_2808221_2811335_2811453_2814363
transcript_14488.known	chr1	-	1910	11	FSM	ENSG00000143498.18	ENST00000352967.9	1910	11	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_4	12.6728055299527	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588752	True	NA	-3	True	AATAAA	-24	NA	222589933	222558311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222579758_222579873_222584127_222584298_222588442_222588566_222589726
transcript_144889.nnic	chrX	+	351	4	NNC	ENSG00000124343.14	novel	2943	11	NA	NA	7012	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	9.84321537348893	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATTTCCTTTTATTCT	2801439	True	NA	16	True	ACTAAA	-26	NA	2801546	2814447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_2801661_2808184_2808221_2811335_2811453_2814363
transcript_144892.nnic	chrX	+	336	3	NNC	ENSG00000124343.14	novel	2943	11	NA	NA	6991	0	at_least_one_novel_splicesite	FALSE	canonical	2	20	junction_1	5.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGATTTCCTTTTATTCT	2801418	True	NA	16	True	ACTAAA	-26	NA	2801525	2814447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_2801661_2811335_2811453_2814363
transcript_144893.known	chrX	+	3192	11	FSM	ENSG00000056998.20	ENST00000398806.8	3192	11	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	45.7475682413831	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2826403	True	NA	29	True	ATTAAA	-14	NA	2828929	2882818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_144899.nic	chrX	+	3076	10	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_2	71.0838489408594	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTGGCCTCCTTCCAG	2828892	False	NA	29	True	ATTAAA	-14	NA	2828903	2882818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2875809_2875915_2877199_2877308_2881051
transcript_144902.nic	chrX	+	3004	9	NIC	ENSG00000056998.20	novel	3192	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_8	70.249110314651	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2828892	False	NA	28	True	ATTAAA	-13	NA	2828903	2882817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_2828976_2830060_2830196_2843212_2843355_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_144906.known	chrX	+	2852	8	FSM	ENSG00000056998.20	ENST00000381161.5	2852	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	91.8488109973812	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCATGTGGCCTCCTTCCA	2826387	True	NA	28	True	ATTAAA	-13	NA	2828913	2882817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_2828976_2830060_2830196_2853979_2854155_2854992_2855156_2856497_2856625_2859842_2860066_2861521_2861723_2881051
transcript_144907.nnic	chrX	+	713	4	NNC	ENSG00000056998.20	novel	3192	11	NA	NA	-10	-11063	at_least_one_novel_splicesite	FALSE	canonical	1	12	junction_3	98.1982122489452	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGTCTAATGAATAAAGCA	2828892	False	NA	NA	False	AATAAA	-18	NA	2828903	2844018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_2828976_2830060_2830196_2843212_2843355_2843654
transcript_144910.nnic	chrX	+	626	3	NNC	ENSG00000056998.20	novel	2852	8	NA	NA	-10	-15285	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	90.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCATTTTCAAAAGGCTAC	2828892	False	NA	2	True	AATAAA	-18	NA	2828903	2839796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_2828976_2830060_2830196_2839377
transcript_144915.known	chrX	-	663	4	FSM	ENSG00000006756.16	ENST00000494870.5	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	4.71404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGATCCC	NA	False	NA	NA	False	NA	NA	NA	2929279	2920380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2920724_2921902_2922025_2925615_2925766_2929231
transcript_144917.known	chrX	-	2678	11	FSM	ENSG00000157399.17	ENST00000684364.1	2678	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	11.7851601601336	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAACAAACAAACATTAAT	NA	False	NA	NA	False	AATAAA	-4	NA	2964288	2934044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2945997_2946135_2949303_2949728_2953142_2953266_2955415_2955538_2958273_2958424_2960377_2960469_2964223
transcript_14492.nic	chr1	-	1803	10	NIC	ENSG00000143498.18	novel	1910	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	19.1717384593979	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTATATTCTACTTTT	-222588759	False	NA	-3	True	AATAAA	-24	NA	222589940	222558311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_222558773_222561363_222561519_222563172_222563297_222564058_222564126_222569509_222569669_222570534_222570666_222577444_222577644_222584127_222584298_222588442_222588566_222589726
transcript_144920.known	chrX	-	1317	9	FSM	ENSG00000157399.17	ENST00000684738.1	1317	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.5639752471638	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	NA	False	NA	-21	True	NA	NA	NA	2964263	2934831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960469_2964223
transcript_144926.known	chrX	-	1294	9	FSM	ENSG00000157399.17	ENST00000682364.1	1294	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.2807067899361	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTGCAGTGAAAAGCTG	NA	False	NA	-21	True	NA	NA	NA	2964288	2934831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2935191_2936741_2936864_2938094_2938258_2943064_2943200_2953142_2953266_2955415_2955538_2958273_2958436_2960377_2960421_2964223
transcript_144927.known	chrX	-	973	5	FSM	ENSG00000157399.17	ENST00000683071.1	973	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	16.9558249578132	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTTTAATTTTTTACCA	NA	False	NA	NA	False	AATAAA	-35	NA	2964257	2951909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_2952561_2953142_2953266_2955415_2955538_2960377_2960421_2964223
transcript_144928.known	chrX	-	6102	9	FSM	ENSG00000183943.6	ENST00000262848.6	6102	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	14.3695641896336	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCTGTGGCTTTTCTCCT	NA	False	NA	29	True	NA	NA	NA	3713649	3604339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_3608946_3612176_3612326_3615814_3615893_3621258_3621317_3626418_3626515_3641851_3641972_3655148_3655413_3674597_3674767_3713087
transcript_144931.known	chrX	-	1271	4	FSM	ENSG00000285756.2	ENST00000475317.5	1271	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.6333157709821	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTGTGTGCTGGTTGGTC	NA	False	NA	-4	True	ATTAAA	-25	NA	3843415	3817527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_3817779_3818441_3818501_3828505_3829388_3843336
transcript_144936.known	chrX	-	1334	5	FSM	ENSG00000130021.15	ENST00000424830.6	1334	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	58.0834528932294	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATCTATCGTCTGCAT	NA	False	NA	NA	False	NA	NA	NA	7148158	7049762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7116965_7117035_7148052
transcript_144939.known	chrX	-	2103	4	FSM	ENSG00000130021.15	ENST00000381077.10	2103	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	16.739839372653	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTGTATGAGAGTCAT	NA	False	NA	-3	True	AATAAA	-18	NA	7148153	7048919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7050473_7077219_7077450_7105619_7105839_7148052
transcript_144940.known	chrX	-	1376	4	FSM	ENSG00000130021.15	ENST00000412827.6	1376	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	54.3507129668048	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATTTACCTGGTATCTAC	NA	False	NA	NA	False	NA	NA	NA	7148153	7049517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7050473_7077219_7077450_7105748_7105839_7148052
transcript_144947.known	chrX	-	3342	7	FSM	ENSG00000006757.12	ENST00000381042.9	3342	7	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_6	17.1634301156072	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTTCTTTTCAATAAG	NA	False	NA	-5	True	ATTAAA	-17	NA	7927413	7898246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7925939_7926133_7927285
transcript_144952.known	chrX	-	2559	6	FSM	ENSG00000006757.12	ENST00000537427.5	2559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	68.5168592391683	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGGGGTACGTGTACAGG	NA	False	NA	NA	False	NA	NA	NA	7927739	7898762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_7900818_7901988_7902142_7912027_7912094_7921712_7921849_7922003_7922099_7927685
transcript_144961.known	chrX	-	1645	9	FSM	ENSG00000101850.13	ENST00000467482.6	1645	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	25.3068666570953	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTGCTTAATGATGGGG	NA	False	NA	57	True	AATAAA	-15	NA	9765847	9725345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9765567
transcript_144964.nic	chrX	-	1378	9	NIC	ENSG00000101850.13	novel	1645	9	NA	NA	-24	-67	combination_of_known_junctions	FALSE	canonical	3	29	junction_8	41.5645206275737	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCAGCCTGACTTGGAT	NA	False	NA	-10	True	AATAAA	-15	NA	9786321	9725412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_9725841_9739484_9739720_9741337_9741456_9743564_9743674_9746043_9746154_9748573_9748667_9759331_9759427_9760716_9760827_9786241
transcript_14497.known	chr1	+	750	3	FSM	ENSG00000225265.2	ENST00000427540.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	10	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTCCATCAATGTCAA	222589776	True	NA	NA	False	NA	NA	NA	222589930	222592733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222589963_222590257_222590408_222592165
transcript_144974.known	chrX	-	6168	10	FSM	ENSG00000101871.17	ENST00000317552.9	6168	10	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	16.7913852103973	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTGTCTCTGCCTGTCT	NA	False	NA	-1	True	AATAAA	-22	NA	10620585	10445555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_10449717_10454869_10455078_10459645_10459808_10469696_10469841_10474622_10474751_10482479_10482629_10495583_10495692_10523091_10523188_10566887_10567604_10620289
transcript_144978.nnic	chrX	-	791	2	NNC	ENSG00000101871.17	novel	6168	10	NA	NA	-43	-16900	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCACATTCCATTTTTT	NA	False	NA	NA	False	AATAAA	-26	NA	10620634	10583581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_10584028_10620289
transcript_144979.known	chrX	-	1071	4	FSM	ENSG00000234129.9	ENST00000433747.6	1071	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAAAAAAATTAAAATTT	NA	False	NA	NA	False	TTTAAA	-20	NA	11111114	10969890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_10970539_11055935_11056037_11106900_11106991_11110882
transcript_144982.known	chrX	+	2312	7	FSM	ENSG00000004961.15	ENST00000380762.5	2312	7	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_4	22.341416447685	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTGGAATAATTTTACA	11105707	True	NA	31	True	AATAAA	-27	NA	11111331	11123086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11111519_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_144986.known	chrX	+	1000	7	FSM	ENSG00000004961.15	ENST00000380763.7	1000	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	129.344071719151	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATTGCACTCATGATGT	11105717	True	NA	29	True	ATTAAA	-15	NA	11111341	11121879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11111424_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_144987.known	chrX	+	2277	7	FSM	ENSG00000004961.15	ENST00000321143.8	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	112.466291246163	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATTTTTTGGAATA	11105676	True	NA	23	True	AATAAA	-19	NA	11111300	11123078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11111461_11112018_11112161_11114834_11114987_11117266_11117416_11118500_11118621_11120906_11120994_11121611
transcript_14499.known	chr1	+	1503	2	FSM	ENSG00000225265.2	ENST00000668515.1	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCCAAGTCCTTTGTGCT	222590168	True	NA	NA	False	AATAAA	-34	NA	222590178	222593439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222590408_222592165
transcript_144999.known	chrX	+	2286	13	FSM	ENSG00000005302.19	ENST00000312196.10	2286	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	18.1680045378927	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGCCTTGTCCTCTTTA	11757876	True	NA	26	True	AATAAA	-40	NA	11758236	11775772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_145000.known	chrX	+	2329	13	FSM	ENSG00000005302.19	ENST00000398527.7	2329	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	21.1830645144234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAAGCCTGTCTTGTTT	11758531	False	NA	-20	True	NA	NA	NA	11758555	11775726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758774_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_145001.known	chrX	+	2230	13	FSM	ENSG00000005302.19	ENST00000649602.1	2230	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	20.3401627875055	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTGTTTGAAAGAACCA	11759314	True	NA	-10	True	AATAAA	-4	NA	11759603	11775736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11759713_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572_11768683_11772155_11772256_11772620_11772706_11774979
transcript_145004.known	chrX	+	1715	10	FSM	ENSG00000005302.19	ENST00000647857.1	1715	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	19.9666388424959	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACTAGCATTTAATTTT	11757889	False	NA	NA	False	AATAAA	-23	NA	11758249	11769102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_11758366_11759792_11759876_11760402_11760499_11760836_11760938_11761499_11761583_11762129_11762253_11762836_11762998_11763779_11763939_11765466_11765730_11768572
transcript_145007.known	chrX	+	2469	7	FSM	ENSG00000101911.13	ENST00000380668.10	2469	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	16.0692943909253	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTGTATGTATCATTGT	12786150	True	NA	9	True	AATAAA	-20	NA	12791411	12824222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643_12820804_12822703
transcript_145009.nic	chrX	+	1800	6	ISM	ENSG00000101911.13	ENST00000380668.10	2469	7	-50	2619	7	-1483	5prime_fragment	FALSE	canonical	3	168	junction_2	16.6493243106139	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAATTTGATGTTATAT	12786100	True	NA	NA	False	AATAAA	-25	NA	12791361	12821603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_12791620_12799206_12799391_12809233_12809333_12810021_12810147_12819506_12819681_12820643
transcript_14501.known	chr1	+	2735	23	FSM	ENSG00000154305.18	ENST00000340535.11	2735	23	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	49.0998518790582	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGTCCTTACAACTTTGAA	222644036	True	NA	11	True	AATAAA	-19	NA	222644302	222665823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222644587_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_145021.known	chrX	+	767	3	FSM	ENSG00000205542.11	ENST00000380635.5	767	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	19303.5	21450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGTGTCTGTTTGGTT	12975209	False	NA	27	True	AATAAA	-16	NA	12975243	12977227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12975444_12976245_12976362_12976776
transcript_145023.known	chrX	+	622	3	FSM	ENSG00000205542.11	ENST00000451311.7	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	37669	junction_1	535	132933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGCTGGTGTGTCTGTTT	12746358	True	NA	23	True	AATAAA	-12	NA	12975109	12977223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12975169_12976245_12976362_12976776
transcript_145024.known	chrX	+	1702	2	FSM	ENSG00000205542.11	ENST00000380636.1	1702	2	0	0	0	0	multi-exon	FALSE	canonical	3	38739	junction_1	0	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGGTGTGTCTGTTTGGT	12746358	True	NA	26	True	AATAAA	-15	NA	12975109	12977226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_12976362_12976776
transcript_145025.nnic	chrX	-	430	3	Antisense	novelGene_ENSG00000226985.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGGGTAATTTGTTG	NA	False	NA	1	True	AATAAA	-23	NA	13430254	13387550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_13387818_13423298_13423348_13430140
transcript_145027.nnic	chrX	-	518	3	Antisense	novelGene_ENSG00000226985.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTGGGTAATTTGTTG	NA	False	NA	1	True	AATAAA	-23	NA	13430254	13387550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_13387818_13423298_13423436_13430140
transcript_145033.known	chrX	+	2034	3	FSM	ENSG00000123595.8	ENST00000464506.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	2.5	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTGTGTGGTTGGTGAC	13685435	True	NA	NA	False	GATAAA	-32	NA	13689127	13710504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13689289_13703813_13703903_13708720
transcript_145035.known	chrX	+	393	3	FSM	ENSG00000123595.8	ENST00000243325.6	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	56	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACAGATATGTAACTAATA	13685468	True	NA	NA	False	TTTAAA	-45	NA	13689160	13708817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13689289_13703734_13703903_13708720
transcript_145038.known	chrX	+	737	2	FSM	ENSG00000123595.8	ENST00000618931.2	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGATTGTTGATGCATTC	13685493	True	NA	NA	False	NA	NA	NA	13689185	13709354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13689289_13708720
transcript_145040.known	chrX	-	2906	7	FSM	ENSG00000196459.15	ENST00000683569.1	2906	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.6861272403584	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGATGTTTGCTCAAG	NA	False	NA	-31	True	NA	NA	NA	13734633	13712263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13720427_13720498_13734043_13734186_13734524
transcript_145041.known	chrX	-	2836	6	FSM	ENSG00000196459.15	ENST00000683983.1	2836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.9832624474932	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	NA	False	NA	-12	True	AATAAA	-14	NA	13734620	13712244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734049_13734186_13734524
transcript_145042.known	chrX	-	794	6	FSM	ENSG00000196459.15	ENST00000458511.7	794	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	49.0118353053627	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTATTTATAAAGAGTTC	NA	False	NA	NA	False	AATAGA	-25	NA	13734599	13714199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13720427_13720498_13734524
transcript_145045.known	chrX	-	2716	5	FSM	ENSG00000196459.15	ENST00000359680.9	2716	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.8114341622264	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGTGGTAGTTTAATATCC	NA	False	NA	-11	True	AATAAA	-15	NA	13734635	13712243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734524
transcript_145047.known	chrX	-	2842	6	FSM	ENSG00000196459.15	ENST00000380579.6	2842	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.980865585589	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCGTGGTAGTTTAATATC	NA	False	NA	-12	True	AATAAA	-14	NA	13734620	13712244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13714506_13716003_13716090_13716533_13716679_13719870_13719983_13734043_13734186_13734524
transcript_145048.known	chrX	-	561	4	FSM	ENSG00000196459.15	ENST00000519885.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.8667087011182	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGAATATGTATTTAGG	NA	False	NA	NA	False	NA	NA	NA	13734575	13715836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13716090_13716533_13716679_13719870_13719983_13734524
transcript_145050.nic	chrX	-	2837	7	NIC	ENSG00000046653.15	novel	3957	7	NA	NA	-52	-95	combination_of_known_junctions	FALSE	canonical	3	518	junction_1	103.932135977708	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATACTTGTGTATGCTT	NA	False	NA	-5	True	AATAAA	-16	NA	13938690	13771033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_13773031_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_145054.known	chrX	-	1033	7	FSM	ENSG00000046653.15	ENST00000398361.7	1033	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	306.035083319253	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGATTCAGTTATTTAC	NA	False	NA	NA	False	NA	NA	NA	13938415	13774336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938326
transcript_145055.known	chrX	-	3957	7	FSM	ENSG00000046653.15	ENST00000454189.6	3957	7	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_1	170.581765991822	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCATTTGGATTCTCTT	NA	False	NA	-6	True	ATTAAA	-19	NA	13938638	13771455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13938506
transcript_14506.known	chr1	+	8126	28	FSM	ENSG00000154305.18	ENST00000344922.10	8126	28	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	42.7865791811485	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTTCAATTTAAGCTTC	222613604	True	NA	16	True	ATTAAA	-16	NA	222618096	222668007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222618244_222621158_222621293_222624767_222624855_222627574_222630390_222632164_222632327_222633103_222633250_222645553_222645686_222648828_222648851_222650291_222650381_222650633_222650712_222650792_222650904_222651976_222652049_222652227_222652333_222653007_222653131_222653227_222653340_222654242_222654299_222654388_222654480_222654654_222654794_222658721_222658824_222659452_222659514_222659621_222659658_222659733_222659802_222659905_222660007_222660176_222660315_222662055_222662125_222662252_222662333_222663997_222664149_222665308
transcript_145060.known	chrX	-	1830	7	FSM	ENSG00000046653.15	ENST00000356942.9	1830	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	308.207001146235	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTATATGTGGGTAGTT	NA	False	NA	NA	False	AAAAAG	-44	NA	13817346	13773953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_13774625_13776237_13776304_13777351_13777426_13779817_13779990_13783364_13783522_13785621_13785809_13816843
transcript_145064.known	chrX	+	3296	22	FSM	ENSG00000046651.16	ENST00000380550.6	3296	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	30.4848202067611	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTTCTCATTCATTAT	13733016	False	NA	-39	True	NA	NA	NA	13734897	13769311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779_13746954_13749426_13749534_13753367_13753442_13755150_13755243_13756577_13756768_13757659_13757791_13758336_13758449_13760114_13760721_13761084_13761212_13762343_13762445_13763744_13763856_13767126_13767285_13768053_13768225_13768717_13768786_13769065
transcript_145069.nic	chrX	+	1273	9	ISM	ENSG00000046651.16	ENST00000682953.1	4299	23	-59	22476	-45	-7118	5prime_fragment	FALSE	canonical	3	5	junction_2	36.9101527360698	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	13734687	False	NA	NA	False	ATTAAA	-18	NA	13734697	13746835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_13735084_13735247_13735347_13736107_13736297_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_145071.nic	chrX	+	1084	8	ISM	ENSG00000046651.16	ENST00000340096.11	3612	23	-50	22522	-45	-7118	5prime_fragment	FALSE	canonical	3	79	junction_5	8.70139561876632	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGAAAAGGAGTTAACCA	13734687	False	NA	NA	False	ATTAAA	-18	NA	13734697	13746835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001_13739033_13744414_13744520_13746318_13746456_13746779
transcript_145079.nic	chrX	+	1068	5	ISM	ENSG00000046651.16	ENST00000683655.1	4139	23	-123	29471	-45	0	5prime_fragment	FALSE	canonical	3	82	junction_4	7.79021822544144	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACTTTTAGGCCAAG	13734687	False	NA	NA	False	NA	NA	NA	13734697	13739314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_13735084_13735247_13735347_13736477_13736679_13738845_13738915_13739001
transcript_14508.known	chr1	+	4104	13	FSM	ENSG00000162819.12	ENST00000340934.10	4104	13	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	17.6721689544763	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTGAGATCTTTTGTT	222712214	True	NA	17	True	AATAAA	-18	NA	222712563	222735187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222712943_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167_222727258_222728742_222728829_222729619_222729702_222730026_222730178_222731356_222731517_222732627
transcript_145080.nic	chrX	+	890	5	ISM	ENSG00000046651.16	ENST00000683284.1	5598	23	-48	31541	-45	0	5prime_fragment	FALSE	canonical	2	7	junction_2	36.5991803186902	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAACTTTTAGGCCAAG	13734687	False	NA	NA	False	NA	NA	NA	13734697	13739314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_13735084_13735247_13735347_13736655_13736679_13738845_13738915_13739001
transcript_145089.known	chrX	-	3147	5	FSM	ENSG00000046647.14	ENST00000680255.1	3147	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	22.0737400546441	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTGTCTTTAAAAATCA	NA	False	NA	-19	True	AATAAA	-15	NA	14029892	14006725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026139_14026222_14029776
transcript_145092.known	chrX	-	1682	5	FSM	ENSG00000046647.14	ENST00000380523.8	1682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.4831958884068	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGGGCGCAATGGTTC	NA	False	NA	NA	False	AATAAA	-20	NA	14029892	14008278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14026051_14026222_14029776
transcript_145098.known	chrX	-	1119	4	FSM	ENSG00000046647.14	ENST00000398355.7	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	33.0286071291069	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGGTTTTTTATGTTG	NA	False	NA	-14	True	CATAAA	-17	NA	14029893	14008672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14009170_14020077_14020535_14021463_14021512_14029776
transcript_145106.known	chrX	-	2712	10	FSM	ENSG00000181544.15	ENST00000452869.1	2712	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	19.8463231660143	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAGAAAATGTTGCA	NA	False	NA	NA	False	NA	NA	NA	14873052	14843692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14868922_14869044_14872985
transcript_145109.known	chrX	-	2894	9	FSM	ENSG00000181544.15	ENST00000324138.7	2894	9	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_8	11.146748404804	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTAGGGCCATTTTATCTC	NA	False	NA	-2	True	AATAAA	-15	NA	14873069	14843406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_14843982_14844502_14844741_14844855_14845287_14850504_14850675_14853038_14853168_14857861_14857955_14859181_14859335_14864559_14865581_14872985
transcript_145111.nic	chrX	-	645	3	ISM	ENSG00000181544.15	ENST00000452869.1	2712	10	-69	21500	-52	150	5prime_fragment	FALSE	canonical	3	66	junction_2	12.5	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-2	True	AATAAA	-19	NA	14873121	14865192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_14865581_14868922_14869044_14872985
transcript_145112.nnic	chrX	-	591	3	NNC	ENSG00000181544.15	novel	3017	10	NA	NA	-19	150	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	37	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTTTACTAATCCTTCA	NA	False	NA	-2	True	AATAAA	-19	NA	14873088	14865192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_14865581_14868922_14869044_14873006
transcript_145117.known	chrX	+	4183	15	FSM	ENSG00000130150.12	ENST00000380492.8	4183	15	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_9	9.23861682376353	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGTCTCTAATTGATA	14872289	True	NA	NA	False	AATAAA	-18	NA	14873420	14922327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14919671
transcript_145119.nic	chrX	+	586	5	ISM	ENSG00000130150.12	ENST00000482354.5	1870	15	-28	24511	6	3892	5prime_fragment	FALSE	canonical	3	59	junction_3	8.84590300647707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTCATTCATTCCAAAT	14872295	True	NA	NA	False	AATAAA	-15	NA	14873426	14897245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083
transcript_145120.known	chrX	+	1870	15	FSM	ENSG00000130150.12	ENST00000482354.5	1870	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	19.6167358785964	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTGTACTTGTCTTGATT	14872323	True	NA	NA	False	TATAAA	-17	NA	14873454	14921756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_14873538_14873688_14873759_14892722_14892879_14895307_14895395_14897083_14897239_14900574_14900636_14902965_14903005_14908859_14908985_14911236_14911414_14912248_14912362_14914502_14914600_14915667_14915765_14916196_14916327_14918679_14918783_14921379
transcript_145122.known	chrX	-	1947	8	FSM	ENSG00000102048.16	ENST00000546332.1	1947	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.27775312999988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTTTTAAGCTTCCCT	NA	False	NA	NA	False	AATAAA	-24	NA	15270467	15243988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15244631_15248682_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780_15270010_15270118
transcript_145123.known	chrX	-	1652	7	FSM	ENSG00000102048.16	ENST00000380485.7	1652	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.25830573921179	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTAAGCTTCCCTGT	NA	False	NA	NA	False	AATAAA	-26	NA	15270061	15243986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15244631_15248682_15248936_15250429_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780
transcript_145124.known	chrX	-	644	6	FSM	ENSG00000102048.16	ENST00000470015.1	644	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.35646599662505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGCAACATTGACCATAA	NA	False	NA	NA	False	NA	NA	NA	15270159	15250529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15250565_15252253_15252405_15254736_15254845_15258865_15258946_15269780_15270010_15270118
transcript_145126.known	chrX	-	2113	7	FSM	ENSG00000165195.16	ENST00000637296.1	2113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	14.8033404638578	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGGTTTTTTAACC	NA	False	NA	NA	False	NA	NA	NA	15335523	15320358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331300_15331873_15331993_15335500
transcript_145127.known	chrX	-	3590	6	FSM	ENSG00000165195.16	ENST00000333590.6	3590	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	9.26498785752038	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGAGTTTGTCTTATT	NA	False	NA	-5	True	AATAAA	-23	NA	15335523	15319455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331215_15331993_15335500
transcript_145128.known	chrX	-	3246	6	FSM	ENSG00000165195.16	ENST00000635598.1	3246	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	14.4968962195361	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTGAGTTTGTCTTAT	NA	False	NA	-6	True	AATAAA	-22	NA	15335554	15319456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331589_15331993_15335500
transcript_145129.known	chrX	-	2963	6	FSM	ENSG00000165195.16	ENST00000638131.1	2963	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	15.2656477098091	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGCTACATGTCCAAAAATA	NA	False	NA	-49	True	NA	NA	NA	15335544	15319499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331819_15331993_15335500
transcript_145130.known	chrX	-	854	6	FSM	ENSG00000165195.16	ENST00000634640.1	854	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	12.214745187682	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACTATTCTCACAGTAAA	NA	False	NA	NA	False	AATAGA	-30	NA	15335554	15321564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15321773_15324664_15324872_15325019_15325153_15325913_15326047_15331873_15331993_15335500
transcript_145136.known	chrX	-	1274	10	FSM	ENSG00000087842.11	ENST00000380420.10	1274	10	0	0	0	0	multi-exon	TRUE	canonical	3	160	junction_7	17.0453280953035	763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493333	15384798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15459656_15459741_15479728_15479822_15491161_15491310_15493189
transcript_145140.nnic	chrX	-	1209	9	NIC	ENSG00000087842.11	novel	1274	10	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	62.2674423354613	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTTTCATTTGAGA	NA	False	NA	0	True	AATAAA	-24	NA	15493352	15384798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_15385117_15390184_15390252_15397448_15397532_15407505_15407551_15425905_15425991_15455847_15456055_15479728_15479822_15491161_15491310_15493189
transcript_145152.known	chrX	+	6837	8	FSM	ENSG00000169239.13	ENST00000318636.8	6837	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	3.15581743348207	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTATTACTATCTTGATT	15737944	True	NA	4	True	AATAAA	-19	NA	15738269	15788411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15738353_15749970_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484
transcript_145155.nnic	chrX	-	1441	7	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	5.87839736284947	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-2	True	AATAAA	-27	NA	15675106	15627317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717_15664777_15674988
transcript_145157.known	chrX	-	1574	7	FSM	ENSG00000147003.7	ENST00000650271.1	1574	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	7.0099136149377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATTTTCTGAATATCA	NA	False	NA	NA	False	NA	NA	NA	15675012	15627438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15667529_15667937_15674988
transcript_14516.known	chr1	-	2975	10	FSM	ENSG00000186063.13	ENST00000340020.11	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	22.4669853807485	189	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGTGATTAACTTAAC	-222706844	True	NA	-7	True	ATTAAA	-16	NA	222712491	222668012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_222669990_222670132_222670251_222673312_222673436_222676095_222676219_222686929_222687037_222687594_222687659_222693788_222693844_222694209_222694264_222703147_222703218_222712207
transcript_145165.nnic	chrX	-	1368	6	NNC	ENSG00000147003.7	novel	1352	6	NA	NA	-94	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	7.02566722810012	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-2	True	AATAAA	-27	NA	15675106	15627317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15675002
transcript_145172.nic	chrX	+	1436	5	NIC	ENSG00000186312.10	novel	926	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_1	53.4994158846618	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15674882	False	NA	NA	False	AATAAA	-21	NA	15674914	15703724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_15675025_15675689_15675779_15688660_15688859_15692962_15693059_15702781
transcript_145195.known	chrX	+	1264	4	FSM	ENSG00000186312.10	ENST00000380334.6	1264	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	39.1946708395698	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTGTCTTTATTATCATA	15674885	False	NA	NA	False	AATAAA	-21	NA	15675545	15703724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15675573_15688660_15688859_15692962_15693059_15702781
transcript_145206.nnic	chrX	+	1310	3	NIC	ENSG00000186312.10	novel	1264	4	NA	NA	-145	-3	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	3.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATAGGTGTCTTTATTATC	15675377	False	NA	NA	False	AATAAA	-18	NA	15675400	15703721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_15675573_15688660_15688859_15702781
transcript_145211.known	chrX	-	1352	6	FSM	ENSG00000147003.7	ENST00000380342.4	1352	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_5	4.84148737476408	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGATTGTGGTCTGGAA	NA	False	NA	-2	True	AATAAA	-27	NA	15664805	15627317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15628128_15639561_15639757_15644915_15645030_15659015_15659102_15664336_15664396_15664717
transcript_145212.known	chrX	+	2205	8	FSM	ENSG00000169239.13	ENST00000454127.2	2205	8	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	5.03457433905889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAATGCCTCTAAGCCTA	NA	False	NA	2	True	TATAAA	-15	NA	15749969	15784535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15750166_15764577_15764776_15772495_15772615_15774301_15774398_15775245_15775309_15776713_15776870_15782484_15783512_15784185
transcript_145213.known	chrX	+	1479	11	FSM	ENSG00000169249.14	ENST00000307771.8	1479	11	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	24.174573419194	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTATATCTTATTTAT	15788186	True	NA	18	True	AATAAA	-18	NA	15790483	15823260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199_15809319_15815676_15815891_15818586_15818643_15820206_15820317_15822730
transcript_145214.nic	chrX	+	1094	7	ISM	ENSG00000169249.14	ENST00000307771.8	1479	11	-19	13436	-6	6028	5prime_fragment	FALSE	canonical	3	110	junction_1	26.8995043324841	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAACTTGGCATGTGT	15788167	True	NA	NA	False	AAAAAG	-9	NA	15790464	15809824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687_15803797_15804110_15804198_15808232_15808272_15809199
transcript_145221.nic	chrX	+	675	4	ISM	ENSG00000169249.14	ENST00000307771.8	1479	11	-351	19464	-23	0	5prime_fragment	FALSE	canonical	3	110	junction_1	35.1883819210577	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATGGTAGGAATCACGTAA	15790103	True	NA	66	True	NA	NA	NA	15790132	15803796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_15790537_15790933_15791014_15799871_15799954_15803687
transcript_145223.known	chrX	-	2365	6	FSM	ENSG00000182287.15	ENST00000673591.1	2365	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	564.576159610021	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAAAATATGACCTAGAA	NA	False	NA	NA	False	NA	NA	NA	15854827	15831289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15833008_15833443_15833525_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_145225.known	chrX	-	3492	5	FSM	ENSG00000182287.15	ENST00000380291.5	3492	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	479.83818887204	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTCTCATGTGAATGAC	NA	False	NA	-14	True	AATAAA	-14	NA	15854804	15830058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_15833008_15845378_15845517_15845902_15846012_15852345_15852525_15854687
transcript_145228.known	chrX	-	894	5	FSM	ENSG00000238178.7	ENST00000454712.7	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGAGTGTCCCTCATA	NA	False	NA	2	True	ATTAAA	-21	NA	16167603	16153199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16153464_16154597_16154681_16157752_16157860_16159652_16159696_16167206
transcript_145229.known	chrX	+	2417	3	FSM	ENSG00000126010.6	ENST00000380289.3	2417	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTACAGTATTTATTCTTG	16123245	True	NA	NA	False	TATAAA	-7	NA	16123564	16153518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16124367_16150304_16150657_16152255
transcript_145231.nnic	chrX	-	2329	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_18	37.4955141349857	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	16712673	16589548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712412
transcript_145232.nnic	chrX	-	2233	19	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-53	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_18	41.0423223297881	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGGAGAAAGTGTGTTCA	NA	False	NA	-7	True	ATTAAA	-19	NA	16712722	16589548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712557
transcript_145233.known	chrX	-	3526	19	FSM	ENSG00000047230.15	ENST00000380241.7	3526	19	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_18	38.1164962181811	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAATGCTGAATAATTAAT	NA	False	NA	NA	False	NA	NA	NA	16712936	16588305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_145235.nnic	chrX	-	2319	18	NNC	ENSG00000047230.15	novel	3953	19	NA	NA	-52	7911	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	56.1067938697187	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	3	True	ATTAAA	-22	NA	16712988	16580087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_16580410_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712721
transcript_145247.known	chrX	-	3953	19	FSM	ENSG00000047230.15	ENST00000359276.9	3953	19	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_18	24.2207568364078	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTCACCTTTTGGTTA	NA	False	NA	NA	False	AATAAA	-26	NA	16712669	16587998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16589776_16590751_16590863_16609540_16609686_16617149_16617247_16620276_16620333_16639146_16639244_16667513_16667558_16667661_16667725_16670579_16670675_16678361_16678451_16683093_16683227_16689449_16689602_16691539_16691621_16693140_16693225_16693370_16693488_16698235_16698337_16698922_16699094_16702736_16702942_16712334
transcript_145248.known	chrX	+	6153	9	FSM	ENSG00000169895.6	ENST00000380155.4	6153	9	0	0	0	0	multi-exon	FALSE	canonical	3	587	junction_1	32.7175411667809	1514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTATAATGGTTGTTCC	16707692	True	NA	13	True	AATAAA	-27	NA	16719611	16765340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16719900_16735226_16735346_16736165_16736233_16741715_16741790_16743700_16743841_16754944_16755094_16756662_16756722_16757161_16757310_16760231
transcript_14525.known	chr1	+	782	2	FSM	ENSG00000162819.12	ENST00000496267.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATGTAGGCATTTCATA	222712209	True	NA	97	True	AATAAA	-17	NA	222712558	222713985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222712943_222713587
transcript_145254.known	chrX	-	2281	12	FSM	ENSG00000102054.18	ENST00000380087.7	2281	12	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_8	69.7395390419604	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGATATCTGCATCAT	NA	False	NA	-4	True	AATAAA	-20	NA	16870362	16844340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858850_16862954_16863101_16869075_16869221_16870037
transcript_145257.known	chrX	+	4362	10	FSM	ENSG00000086712.13	ENST00000380122.10	4362	10	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_8	14.7932250092006	163	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTATTCTTTC	16776619	True	NA	104	True	AGTAAA	-19	NA	16786465	16844519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_16786590_16818573_16818878_16820163_16820256_16828093_16828265_16829575_16829771_16832622_16832743_16834282_16834358_16837592_16837686_16839820_16839917_16841427
transcript_145266.known	chrX	-	1904	12	FSM	ENSG00000102054.18	ENST00000404022.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_9	248.445514255579	913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGATTGGCTTTGCAGA	NA	False	NA	88	True	NA	NA	NA	16870361	16844689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_16845104_16845827_16845939_16849243_16849302_16852045_16852123_16852550_16852629_16852748_16852876_16853681_16853843_16857593_16857710_16858675_16858823_16862954_16863101_16869075_16869221_16870037
transcript_145269.known	chrX	+	2887	8	FSM	ENSG00000047634.15	ENST00000380041.8	2887	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.95394908975717	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737216	True	NA	10	True	AATAAA	-20	NA	17737492	17754985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17744070_17744220_17745455_17745540_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_14527.known	chr1	+	709	8	FSM	ENSG00000162819.12	ENST00000426638.1	709	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.6808196205648	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGCCAATTTCTATCAAAA	222712051	False	NA	NA	False	ACTAAA	-38	NA	222713368	222727232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222713417_222715683_222715801_222718924_222719032_222719262_222719360_222722418_222722515_222724091_222724165_222725449_222725556_222727167
transcript_145271.known	chrX	+	2830	7	FSM	ENSG00000047634.15	ENST00000380043.7	2830	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.8049129826454	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737192	True	NA	10	True	AATAAA	-20	NA	17737468	17754985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17744070_17744220_17746014_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_145273.known	chrX	+	2679	6	FSM	ENSG00000047634.15	ENST00000380045.7	2679	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	5.0438080851674	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAAGCCTCAGATGTGAT	17737191	True	NA	10	True	AATAAA	-20	NA	17737467	17754985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_17737681_17746017_17746099_17749399_17749505_17749893_17750294_17751814_17751967_17753257
transcript_145284.nnic	chrX	-	890	5	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-139	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.77263412660235	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104783	17970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_17982490_17982595_18025374_18025486_18104550
transcript_145291.nnic	chrX	-	748	4	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-108	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.82842712474619	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104752	17970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_17982490_17982595_18104550
transcript_145292.nnic	chrX	-	667	4	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-112	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.82842712474619	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104756	17970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_17982490_17982595_18104635
transcript_145309.nnic	chrX	+	1003	3	Antisense	novelGene_ENSG00000225882.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGTATAAAGATTTAATAT	NA	False	NA	NA	False	AATAAA	-20	NA	18104287	18123534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_18104389_18121606_18121855_18122880
transcript_145311.nnic	chrX	-	679	3	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-143	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104787	17970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_18104550
transcript_145312.nnic	chrX	-	571	3	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-120	68	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104764	17970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_17970431_17971986_17972127_18104635
transcript_145319.nnic	chrX	-	540	2	NIC	ENSG00000225882.1	novel	708	5	NA	NA	-144	68	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTTCAGGGTGATTTG	NA	False	NA	-2	True	AATAAA	-20	NA	18104788	17970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_17970431_18104550
transcript_145321.nnic	chrX	-	491	2	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-139	-110953	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTTTTGTCTTACCT	NA	False	NA	NA	False	CATAAA	-20	NA	18104783	18081149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_18081408_18104550
transcript_145322.nnic	chrX	-	434	2	NNC	ENSG00000225882.1	novel	708	5	NA	NA	-139	-111010	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGAGATTTTGATGTC	NA	False	NA	NA	False	AATAAA	-18	NA	18104783	18081206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_18081408_18104550
transcript_145325.known	chrX	-	4162	15	FSM	ENSG00000102098.19	ENST00000251900.9	4162	15	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	17.9433632776658	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAAGCCTCAGATGTGAT	NA	False	NA	-3	True	AATAAA	-19	NA	18354688	18239312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_18241380_18242438_18242591_18246576_18246829_18247768_18247883_18256847_18257031_18258043_18258248_18260170_18260292_18265584_18265803_18304971_18305216_18320331_18320421_18323858_18324094_18324906_18324978_18330586_18330656_18334049_18334096_18354591
transcript_145326.known	chrX	-	5077	33	FSM	ENSG00000044446.12	ENST00000379942.5	5077	33	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_4	19.1245914989053	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTGGCCAGGAGGTGCG	NA	False	NA	0	True	AATAAA	-21	NA	18984114	18892297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_18893656_18894203_18894405_18895137_18895192_18897162_18897334_18899172_18899227_18900669_18900700_18901484_18901604_18905757_18905860_18906494_18906625_18906735_18906815_18907017_18907098_18907899_18908057_18908800_18908935_18910871_18910961_18918680_18918855_18920031_18920202_18924055_18924135_18924380_18924526_18925667_18925778_18926452_18926588_18929227_18929307_18931640_18931749_18936054_18936151_18938626_18938750_18939994_18940049_18941528_18941676_18943709_18943809_18945077_18945159_18948743_18948827_18951103_18951273_18952493_18952542_18954253_18954413_18983854
transcript_145329.known	chrX	-	2049	8	FSM	ENSG00000180815.15	ENST00000470101.1	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.52656557650139	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAATGGTCAGCGCGAA	NA	False	NA	-4	True	AATAAA	-14	NA	19373178	19360059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_19360834_19361338_19361416_19361492_19361594_19362737_19362851_19369053_19369220_19370958_19371065_19371344_19371531_19372652
transcript_145334.known	chrX	+	3484	12	FSM	ENSG00000131828.14	ENST00000379806.9	3484	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	503.779730168777	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19346509_19346624_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_145338.known	chrX	+	3391	11	FSM	ENSG00000131828.14	ENST00000545074.5	3391	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	401.569782229689	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351259_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_145340.known	chrX	+	3349	11	FSM	ENSG00000131828.14	ENST00000422285.7	3349	11	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	81.2561382296747	4274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTGAACCACGCTAATAC	19332149	True	NA	49	True	AAAAAG	-19	NA	19343926	19361718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19354490_19354584_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_145354.known	chrX	+	3277	10	FSM	ENSG00000131828.14	ENST00000540249.5	3277	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	388.732921104731	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTAACCCTGTATCACTGA	19332115	True	NA	36	True	AATAAA	-38	NA	19343892	19361705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081_19353174_19355348_19355505_19355685_19355758_19357651_19357720_19358915_19359025_19359488
transcript_145369.known	chrX	+	734	5	FSM	ENSG00000131828.14	ENST00000379805.3	734	5	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	97.5663235957982	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGATTATAATGGAGCTG	19332190	True	NA	NA	False	NA	NA	NA	19343967	19353327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280_19351408_19353081
transcript_145370.known	chrX	+	611	4	FSM	ENSG00000131828.14	ENST00000492364.1	611	4	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_1	112.431707666872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTAAGTTTCTTTTTT	19332158	True	NA	NA	False	TTTAAA	-42	NA	19343935	19351498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_19344095_19349311_19349372_19349936_19350111_19351280
transcript_145376.known	chrX	-	765	6	FSM	ENSG00000173674.11	ENST00000379593.1	765	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	386.337986742179	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAGACCATGTCTACTAA	NA	False	NA	NA	False	NA	NA	NA	20141826	20128077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20141624
transcript_145379.known	chrX	-	4414	7	FSM	ENSG00000173674.11	ENST00000379607.10	4414	7	0	0	0	0	multi-exon	FALSE	canonical	3	834	junction_4	119.757741573005	3933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTATACAATTGATTCT	NA	False	NA	-6	True	AATAAA	-18	NA	20141838	20124524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20128312_20130515_20130608_20132181_20132264_20133956_20134008_20135737_20135842_20138538_20138623_20141624
transcript_145380.known	chrX	-	7987	22	FSM	ENSG00000177189.14	ENST00000379565.9	7987	22	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_21	9.8701317688158	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTCCCTTTTATCAGA	NA	False	NA	0	True	AATAAA	-17	NA	20266909	20149910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20266563
transcript_145381.known	chrX	-	2682	22	FSM	ENSG00000177189.14	ENST00000646610.1	2682	22	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_21	18.0341072677111	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCATATACAGTACATTTC	NA	False	NA	NA	False	NA	NA	NA	20267100	20154931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_20155521_20156108_20156250_20161643_20161762_20162963_20163041_20164898_20165061_20167588_20167748_20169401_20169492_20172745_20172872_20175163_20175289_20176249_20176353_20176433_20176499_20176995_20177085_20186295_20186367_20187827_20187971_20188496_20188535_20193486_20193594_20194188_20194269_20195064_20195146_20204021_20204104_20209287_20209405_20234757_20234815_20267038
transcript_145382.known	chrX	+	3808	6	FSM	ENSG00000149970.16	ENST00000644832.1	3808	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	2.72763633939717	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACAATAATTAGCAGAAAAT	21373546	True	NA	NA	False	TTTAAA	-2	NA	21374421	21493229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21374962_21426496_21426661_21432611_21432815_21440693_21440782_21470765_21470808_21490458
transcript_145385.known	chrX	+	4446	11	FSM	ENSG00000012174.12	ENST00000379484.10	4446	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_8	11.6687617166519	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCGTCTATGTGTTGTCT	21837602	True	NA	24	True	AATAAA	-32	NA	21839616	21885423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497_21869679_21878041_21878137_21878496_21878693_21880896_21880973_21882432
transcript_145392.known	chrX	+	4457	7	FSM	ENSG00000012174.12	ENST00000365779.2	4457	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	8.49346153749394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACACCCTGGAAGTGCTTG	21837639	True	NA	NA	False	AATAAA	-16	NA	21839653	21873084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21839810_21843169_21843319_21845170_21845385_21851508_21851613_21853375_21853504_21868466_21868586_21869497
transcript_145400.known	chrX	+	1703	11	FSM	ENSG00000102172.16	ENST00000404933.7	1703	11	0	0	0	0	multi-exon	FALSE	canonical	2	1181	junction_6	111.42190089924	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTTCTGTCGTTT	21915644	True	NA	16	True	ATTAAA	-16	NA	21940708	21994837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21940874_21967195_21967317_21971896_21971991_21972506_21972572_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_145401.known	chrX	+	1174	9	FSM	ENSG00000102172.16	ENST00000379404.5	1174	9	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	481.16484636245	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTATTTTTAATTTAAAAA	21915650	True	NA	NA	False	NA	NA	NA	21940714	21994473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_21940874_21967195_21967317_21977060_21977237_21977959_21978115_21978876_21978967_21984303_21984419_21985143_21985224_21992596_21992713_21994311
transcript_145402.known	chrX	+	681	2	FSM	ENSG00000174028.6	ENST00000312214.5	681	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATGGAAATGTGGAGAGAA	23075681	False	NA	NA	False	NA	NA	NA	23075757	23076767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23076340_23076668
transcript_145404.nnic	chrX	+	985	4	NNC	ENSG00000165186.12	novel	12883	3	NA	NA	-523	-41630	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	1.24721912892465	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAATTTGTCATGTTT	23334314	False	NA	3	True	AATAAA	-16	NA	23334325	23351478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_23334462_23334874_23335227_23350473_23350608_23351115
transcript_145416.known	chrX	+	956	7	FSM	ENSG00000123131.13	ENST00000379341.9	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	2658	junction_6	355.934294810464	15197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGTGTTGCAGTAGTAAT	23641513	True	NA	18	True	AATAAA	-20	NA	23667492	23686397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23667812_23671528_23671647_23674989_23675107_23679164_23679288_23682395_23682527_23683670_23683706_23686284
transcript_145419.nic	chrX	-	1616	14	NIC	ENSG00000123130.17	novel	1675	15	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	62.3027538403775	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATTGTGAACCTACCA	NA	False	NA	-31	True	AATAAA	-15	NA	23743321	23703676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_14542.nic	chr1	+	803	5	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-24	0	intron_retention	FALSE	canonical	3	16	junction_2	35.5035209521535	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813318	True	NA	4	True	AATAAA	-17	NA	222814997	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222827427_222827602_222835118_222835216_222836995
transcript_145427.known	chrX	-	683	7	FSM	ENSG00000123130.17	ENST00000492081.1	683	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	112.996558453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACGCTGCAGAAGAGATTA	NA	False	NA	-2	True	AATAAA	-23	NA	23743250	23707830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23707945_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23743124
transcript_145431.known	chrX	-	1675	15	FSM	ENSG00000123130.17	ENST00000336430.11	1675	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	66.17744390374	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAACCTACCATGTTGC	NA	False	NA	-25	True	AATAAA	-21	NA	23743276	23703670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23735918_23736017_23743124
transcript_145432.known	chrX	-	4318	16	FSM	ENSG00000123130.17	ENST00000379303.10	4318	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	84.2906611408142	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACCCTTAAATTATT	NA	False	NA	-1	True	AGTAAA	-20	NA	23743276	23701054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23703983_23704693_23704845_23704992_23705081_23705508_23705595_23705767_23705859_23706627_23706740_23707876_23707945_23713134_23713209_23721880_23721985_23722669_23722754_23730526_23730565_23730815_23730987_23733171_23733218_23734340_23734368_23735918_23736017_23743124
transcript_145436.known	chrX	+	1049	6	FSM	ENSG00000130066.17	ENST00000379270.5	1049	6	0	0	0	0	multi-exon	FALSE	canonical	3	604	junction_5	28.032837887021	9034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779066	True	NA	24	True	AATAAA	-17	NA	23783172	23786210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23785327_23785430_23785519_23785561_23785685
transcript_145437.known	chrX	+	1135	7	FSM	ENSG00000130066.17	ENST00000489394.5	1135	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	286.757010957593	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGTGTAAGCATTTT	23779090	True	NA	24	True	AATAAA	-17	NA	23783196	23786210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23783418_23783657_23783710_23783799_23783884_23784293_23784404_23785327_23785430_23785519_23785561_23785685
transcript_145444.known	chrX	-	1122	9	FSM	ENSG00000184831.14	ENST00000379226.9	1122	9	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_1	59.0566465353393	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCGATATCACTGAGTGATG	NA	False	NA	-4	True	ATTAAA	-21	NA	23907938	23833352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833613_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_145446.nic	chrX	-	1160	9	NIC	ENSG00000184831.14	novel	1122	9	NA	NA	-147	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_1	62.408808472843	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23908085	23833359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844_23880953_23907693
transcript_145453.known	chrX	-	916	8	FSM	ENSG00000184831.14	ENST00000490078.2	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	112.332233184625	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTTAAAAAAAAAAATCCGAT	NA	False	NA	-18	True	ATTAAA	-7	NA	23907903	23833366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23878914_23879035_23880844_23880953_23907693
transcript_14546.nic	chr1	+	477	5	NIC	ENSG00000154309.9	novel	362	4	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	29.9614335438076	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813318	True	NA	4	True	AATAAA	-17	NA	222814997	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995_222837067_222837218
transcript_145467.known	chrX	-	714	8	FSM	ENSG00000184831.14	ENST00000439528.5	714	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	66.7162740603055	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATCCGATATCA	NA	False	NA	-14	True	ATTAAA	-11	NA	23880901	23833362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833511_23840312_23840378_23856301_23856383_23858641_23858734_23868592_23868689_23874402_23874458_23878914_23879035_23880844
transcript_145468.known	chrX	-	244	2	FSM	ENSG00000184831.14	ENST00000476598.1	244	2	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCCGATATCACTG	NA	False	NA	-11	True	ATTAAA	-14	NA	23840405	23833359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_23833511_23840312
transcript_145469.known	chrX	+	1549	9	FSM	ENSG00000165182.12	ENST00000379211.8	1549	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.330718913883074	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGAGTATGCTCTCTTA	NA	False	NA	NA	False	AATAAA	-20	NA	23908005	23939509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_23908330_23910282_23910419_23911756_23911857_23915699_23915795_23916216_23916329_23927238_23927371_23935195_23935426_23938546_23938701_23939243
transcript_145476.known	chrX	+	3457	12	FSM	ENSG00000130741.11	ENST00000253039.9	3457	12	0	0	0	0	multi-exon	FALSE	canonical	3	1309	junction_6	115.565229693233	577	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATCTAACATGTCCC	24038251	True	NA	25	True	AATAAA	-21	NA	24054955	24078810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24055038_24055614_24055679_24057420_24057549_24057632_24057755_24060087_24060183_24062415_24062575_24064200_24064336_24065997_24066093_24067963_24068109_24071557_24071728_24073090_24073264_24076721
transcript_145478.known	chrX	+	7612	10	FSM	ENSG00000005889.16	ENST00000304543.10	7612	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	9.82564043085962	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGCATCTGTACCGACTT	24148862	True	NA	NA	False	NA	NA	NA	24149728	24216255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24149795_24151690_24151801_24152719_24152831_24172714_24172801_24179182_24179771_24207325_24207476_24207711_24207856_24208217_24208371_24208899_24209041_24210192
transcript_145483.nnic	chrX	-	463	3	Antisense	novelGene_ENSG00000005889.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGATTTTTTTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	24297422	24200608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_24200840_24203735_24203877_24297331
transcript_145485.nnic	chrX	-	322	2	Antisense	novelGene_ENSG00000005889.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGAGATTTTTTTGTGA	NA	False	NA	NA	False	AATAAA	-14	NA	24297422	24200608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_24200840_24297331
transcript_145489.known	chrX	-	348	1	FSM	ENSG00000225071.1	ENST00000419089.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	24429920	24429572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24429600_24429900
transcript_14549.known	chr1	+	771	5	FSM	ENSG00000154309.9	ENST00000435378.6	771	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.4493345951487	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTTTTTTTTGGTATT	222813379	True	NA	5	True	AATAAA	-18	NA	222815058	222837385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222823855_222823946_222827427_222827602_222835118_222835216_222836995
transcript_145490.known	chrX	+	12720	12	FSM	ENSG00000067992.17	ENST00000568479.2	12720	12	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_11	26.0314495108583	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCGTCACTGTGGTGTT	24460115	True	NA	21	True	AATAAA	-18	NA	24465285	24550466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928_24534069_24539133
transcript_145494.known	chrX	+	1741	11	FSM	ENSG00000067992.17	ENST00000379162.9	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_3	17.9599554565149	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTATGATTCCACTTATGT	24460115	True	NA	NA	False	AATAAA	-20	NA	24465285	24534422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24465562_24494741_24494884_24498828_24498901_24503326_24503512_24505208_24505299_24518932_24519011_24526197_24526275_24527573_24527676_24528075_24528187_24531656_24531771_24533928
transcript_145495.known	chrX	-	1289	9	FSM	ENSG00000102230.14	ENST00000356768.8	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	37.3042809205592	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	NA	False	NA	-14	True	AATAAA	-14	NA	24647158	24561841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24562118_24562442_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_145496.nnic	chrX	-	1264	8	NNC	ENSG00000102230.14	novel	1289	9	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	40.5251244820508	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTGGCAAAGTGCTTCTG	NA	False	NA	-14	True	AATAAA	-14	NA	24647376	24561841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_24561938_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_145498.known	chrX	-	5558	8	FSM	ENSG00000102230.14	ENST00000379144.7	5558	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	10.6330251805305	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCGTGTGTCATTGTCAT	NA	False	NA	-5	True	AATAAA	-17	NA	24647347	24558086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24587240_24587320_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_145500.known	chrX	-	856	7	FSM	ENSG00000102230.14	ENST00000496020.1	856	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	43.8688069386691	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCACCTTCTCATGGCT	NA	False	NA	NA	False	NA	NA	NA	24647038	24562400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24562506_24575129_24575319_24579315_24579459_24590022_24590175_24607744_24607862_24618984_24619085_24646988
transcript_145503.known	chrX	+	2399	15	FSM	ENSG00000101868.13	ENST00000677890.1	2399	15	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	14.0946146902037	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATATCCCGTTTTCTCTA	24689504	True	NA	NA	False	ATTAAA	-23	NA	24693940	24728628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781
transcript_145505.known	chrX	+	1803	12	FSM	ENSG00000101868.13	ENST00000678847.1	1803	12	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_7	14.8507728602068	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCTGATAGAATGAAAATC	24689436	True	NA	NA	False	TTTAAA	-19	NA	24693872	24724848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24694005_24699424_24699550_24703250_24703348_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334
transcript_145506.known	chrX	+	5201	33	FSM	ENSG00000101868.13	ENST00000672178.1	5201	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	66.3762947143029	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTTTCTAAAGGGAAAGCA	24689472	True	NA	0	True	TATAAA	-36	NA	24693908	24996969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24694005_24699424_24699550_24704388_24704470_24714553_24714670_24715140_24715204_24716361_24716455_24716883_24716972_24717289_24717492_24717579_24717759_24723154_24723268_24724334_24724452_24725980_24726056_24726932_24727072_24727781_24727937_24732369_24732455_24735398_24735489_24741374_24741505_24743229_24743330_24744599_24744894_24745417_24745543_24748310_24748461_24748869_24748993_24809897_24809931_24810707_24810801_24812657_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_145508.nic	chrX	+	1770	6	ISM	ENSG00000101868.13	ENST00000679301.1	2668	12	17264	-32	13709	0	3prime_fragment	FALSE	canonical	3	176	junction_5	17.2232401132888	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTGGTGAATCCTTA	24826525	True	NA	17	True	AATAAA	-17	NA	24826538	24996986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_24826602_24841651_24841831_24843545_24843678_24888005_24888123_24930452_24930550_24995804
transcript_145509.known	chrX	+	806	5	FSM	ENSG00000101868.13	ENST00000494204.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	17.9304210770411	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCTTGCTTTTATTTCTG	24812806	True	NA	NA	False	TTTAAA	-31	NA	24812829	24841983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24812864_24814978_24815112_24821451_24821584_24826426_24826602_24841651
transcript_145510.known	chrX	+	130	1	FSM	ENSG00000251869.1	ENST00000516060.1	130	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATATATGTGTCTCTTGTT	24744423	False	NA	NA	False	AGTAAA	-30	NA	24744440	24744570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_24744400_24744600
transcript_145511.known	chrX	-	678	1	FSM	ENSG00000232472.1	ENST00000447718.1	678	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1415	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCCTGGATCATGGC	NA	False	NA	NA	False	NA	NA	NA	24789069	24788391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_24788400_24789100
transcript_145512.known	chrX	-	756	3	FSM	ENSG00000223742.1	ENST00000456037.1	756	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCCCTCCTGCTCCCTC	NA	False	NA	NA	False	NA	NA	NA	28586395	28571531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_28572082_28576304_28576423_28586307
transcript_145513.known	chrX	+	1607	2	FSM	ENSG00000099399.6	ENST00000378988.5	1607	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCTTGTTTATGGCTCTT	30215507	True	NA	NA	False	ATTAAA	-15	NA	30215562	30220089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30215656_30218575
transcript_145514.known	chrX	+	4515	21	FSM	ENSG00000198814.14	ENST00000427190.6	4515	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	14.4446356824947	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGTGAATTTGTAAATCA	30652750	True	NA	NA	False	AATAAA	-16	NA	30653422	30731462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_145517.known	chrX	+	3638	20	FSM	ENSG00000198814.14	ENST00000378946.7	3638	20	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_19	18.8547443642589	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30697731_30697750_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30728731
transcript_145518.known	chrX	+	3707	20	FSM	ENSG00000198814.14	ENST00000378943.7	3707	20	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_8	18.0568508188954	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCATTTCTCATTTACAG	30652686	True	NA	NA	False	AATAAA	-18	NA	30653358	30730608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616_30696684_30700413_30700450_30700837_30700906_30707555_30707599_30708053_30708135_30718537_30718617_30719418_30719516_30720010_30720096_30720620_30720742_30720851_30720996_30724100_30724182_30727465_30727553_30728731
transcript_14552.nic	chr1	+	857	5	NIC	ENSG00000154309.9	novel	890	6	NA	NA	0	0	intron_retention	FALSE	canonical	3	16	junction_2	35.2517730050561	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813357	True	NA	4	True	AATAAA	-17	NA	222815036	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222827427_222827602_222835118_222835216_222836995
transcript_145521.nic	chrX	+	966	8	ISM	ENSG00000198814.14	ENST00000378945.7	2063	19	-126	32436	-7	72	5prime_fragment	FALSE	canonical	3	50	junction_7	12.7775312999988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAAACCTAATAATT	30652679	True	NA	NA	False	AAAACA	-42	NA	30653351	30696734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30691122_30691200_30694399_30694538_30696041_30696152_30696616
transcript_145523.known	chrX	+	458	5	FSM	ENSG00000198814.14	ENST00000378941.4	458	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	33.5438146310166	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCTATAAAGTACTTGT	30652865	False	NA	NA	False	ATTAAA	-21	NA	30653537	30678114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_30653616_30665510_30665585_30668011_30668119_30677374_30677453_30677993
transcript_145526.known	chrX	-	4645	17	FSM	ENSG00000198947.18	ENST00000378723.7	4645	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	8.47030659126339	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACTGGACTGCAGTACTT	NA	False	NA	NA	False	AATAAA	-27	NA	31266952	31119218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31173538_31173605_31177931_31177971_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_145527.known	chrX	-	4535	15	FSM	ENSG00000198947.18	ENST00000680162.2	4535	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	10.2539191113865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTATGTTACAAAAAAGTA	NA	False	NA	NA	False	AATAAA	-7	NA	31266967	31119238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31121931_31134101_31134195_31146290_31146415_31147274_31147519_31169442_31169602_31172347_31172414_31178668_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_145528.known	chrX	-	1400	9	FSM	ENSG00000198947.18	ENST00000681654.1	1400	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.96735913114001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCCACTAATTGCCTTA	NA	False	NA	NA	False	NA	NA	NA	31266963	31178421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31178806_31180369_31180482_31182737_31182905_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_14553.known	chr1	+	764	5	FSM	ENSG00000154309.9	ENST00000434872.2	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.4992283877113	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	222813389	True	NA	3	True	AATAAA	-16	NA	222815068	222837383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222823883_222823946_222830928_222831043_222835118_222835216_222836995
transcript_145530.known	chrX	-	2689	3	FSM	ENSG00000198947.18	ENST00000681870.1	2689	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTTCCCGGAGTACCGG	NA	False	NA	NA	False	AATAAA	-16	NA	31266952	31237711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31240196_31260954_31261017_31266809
transcript_145531.known	chrX	-	1296	7	FSM	ENSG00000198947.18	ENST00000681334.1	1296	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.4154623774458	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGTAGTTATGGGAAGCC	NA	False	NA	NA	False	AATAAA	-20	NA	31266971	31195094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_31195646_31203960_31204119_31206581_31206668_31209497_31209700_31223046_31223122_31260954_31261017_31266809
transcript_145532.known	chrX	+	339	3	FSM	ENSG00000233928.7	ENST00000445233.1	339	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCAGAAATTGTGTGAAA	33742081	False	NA	NA	False	NA	NA	NA	33742117	33942235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_33742135_33853614_33853716_33942014
transcript_145533.known	chrX	+	616	2	FSM	ENSG00000233928.7	ENST00000659014.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGATCACTCCTAGCTAT	NA	False	NA	NA	False	AAAAAG	-10	NA	33726383	33853978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_33726636_33853614
transcript_145534.known	chrX	+	1663	4	FSM	ENSG00000130962.18	ENST00000463135.1	1663	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	20.9814733091416	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTCCAGTTGATGC	37348409	True	NA	NA	False	AATAAA	-21	NA	37349378	37442224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37440790
transcript_145535.nnic	chrX	+	1160	4	NNC	ENSG00000130962.18	novel	1663	4	NA	NA	-40	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.2910046630673	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTCCAGTTGATGCGTGC	37348299	True	NA	NA	False	AATAAA	-25	NA	37349268	37442228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_37349396_37406208_37406260_37425839_37426001_37441407
transcript_145537.known	chrX	+	4400	4	FSM	ENSG00000130962.18	ENST00000378628.9	4400	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	12.1197726417986	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTTTTTTTCTGCCATG	37348394	True	NA	5	True	AATAAA	-18	NA	37349363	37457291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37349396_37406208_37406260_37425839_37426001_37453135
transcript_145540.known	chrX	+	4509	4	FSM	ENSG00000130962.18	ENST00000543642.5	4509	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	20.1163283594862	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTTTTTTCTGCCATGT	37348360	True	NA	6	True	AATAAA	-19	NA	37349329	37457292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37349470_37406208_37406260_37425839_37426001_37453135
transcript_145541.known	chrX	+	650	3	FSM	ENSG00000130962.18	ENST00000491253.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	16	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTTAAAATACTAATGG	37348339	True	NA	NA	False	AATGAA	-26	NA	37349308	37453647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37349396_37406208_37406260_37453135
transcript_145543.nnic	chrX	-	480	2	Antisense	novelGene_ENSG00000250349.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTGTTTTCTTTTATTT	NA	False	NA	0	True	AATGAA	-41	NA	37460995	37454909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_37455108_37460713
transcript_145546.known	chrX	+	10123	5	FSM	ENSG00000147036.12	ENST00000378619.4	10123	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTCCTGATTAATAA	37571639	True	NA	NA	False	AATAAA	-16	NA	37571660	37684463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_37572444_37655687_37655812_37659461_37659660_37667281_37667490_37675653
transcript_14555.nic	chr1	+	531	5	NIC	ENSG00000154309.9	novel	517	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	29.2489316044193	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813357	True	NA	4	True	AATAAA	-17	NA	222815036	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995_222837067_222837218
transcript_145551.known	chrX	-	920	6	FSM	ENSG00000165169.11	ENST00000378581.7	920	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	37.2751928231096	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGGGCAACCACCCC	NA	False	NA	NA	False	NA	NA	NA	37847514	37836756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_37837360_37840612_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_145560.known	chrX	-	719	5	FSM	ENSG00000165169.11	ENST00000432389.2	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	37.0944739819828	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGAATTTGTCAGTGTAT	NA	False	NA	-5	True	ACTAAA	-24	NA	37847408	37840542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847042
transcript_145561.known	chrX	-	2151	5	FSM	ENSG00000165169.11	ENST00000378578.9	2151	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	15.2212844398888	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGCTTCTGGATAATCA	NA	False	NA	0	True	AATAAA	-21	NA	37847571	37838835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_37840652_37841027_37841106_37841781_37841906_37846316_37846359_37847480
transcript_145569.known	chrX	-	1846	10	FSM	ENSG00000101955.15	ENST00000378533.4	1846	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	5.61743318211757	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTAGAACTCACTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	38220871	38149338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38149895_38154461_38154584_38156895_38157030_38160016_38160197_38160932_38161055_38164768_38164896_38171880_38172058_38174159_38174352_38178284_38178345_38220695
transcript_145571.known	chrX	-	3053	19	FSM	ENSG00000156313.15	ENST00000642395.2	3053	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	7.7028133388609	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATTGATAAGTATTAATAAA	NA	False	NA	2	True	AATAAA	-27	NA	38327509	38269162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_38269833_38273385_38273478_38275088_38275147_38276586_38276773_38287093_38287246_38287860_38288042_38290958_38291025_38291392_38291485_38297283_38297453_38298955_38299142_38301246_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_145580.nic	chrX	-	1402	9	ISM	ENSG00000156313.15	ENST00000645032.1	4733	15	-61	16699	-26	-2137	5prime_fragment	FALSE	canonical	3	25	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATGTCAGACATTATG	NA	False	NA	NA	False	AATAAA	-19	NA	38327570	38301106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_38301372_38304634_38304791_38310614_38310774_38317315_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_145582.nic	chrX	-	892	6	ISM	ENSG00000156313.15	ENST00000647261.1	1325	9	-26	13645	-26	0	5prime_fragment	FALSE	canonical	3	28	junction_4	6.67532770731145	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTCTGGTTCTATAG	NA	False	NA	NA	False	ATTAAA	-16	NA	38327570	38317245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_38317466_38318828_38318988_38321026_38321090_38322852_38322946_38323398_38323525_38327339
transcript_145583.known	chrX	+	1742	8	FSM	ENSG00000156298.13	ENST00000378482.7	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	11.0804111026659	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTCTGGTTCTGTTC	38560364	True	NA	NA	False	AATAAA	-18	NA	38561541	38688918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38561628_38666120_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_145586.known	chrX	+	1683	7	FSM	ENSG00000156298.13	ENST00000419600.3	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	11.0754984838908	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTCTGGTTCTGTTCTT	NA	False	NA	NA	False	AATAAA	-20	NA	38666095	38688920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38666310_38671375_38671451_38674220_38674317_38675704_38675861_38681203_38681288_38687598_38687675_38687938
transcript_145588.nnic	chrX	-	420	2	NNC	ENSG00000287729.1	novel	1223	2	NA	NA	6396	-277	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCATAAAATACTTGAAAAG	NA	False	NA	NA	False	AATAAA	-25	NA	38794282	38779860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_38780157_38794158
transcript_145589.known	chrX	+	1812	2	FSM	ENSG00000165175.17	ENST00000457894.5	1812	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGACAAGCGTCTGGTCCT	38798189	True	NA	-61	True	AATAAA	-22	NA	38801439	38806446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38801488_38804682
transcript_145590.known	chrX	+	4814	2	FSM	ENSG00000165175.17	ENST00000336949.7	4814	2	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	0	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGTTCTCTCTGGTAT	38798204	True	NA	30	True	AATAAA	-34	NA	38801454	38806537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38804414_38804682
transcript_145592.known	chrX	+	3781	3	FSM	ENSG00000165175.17	ENST00000614558.3	3758	3	-27	4	-8	-4	multi-exon	FALSE	canonical	3	18	junction_1	197	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTAAATTTTGTGTTCT	38798181	True	NA	21	True	AATAAA	-25	NA	38801431	38806528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38801488_38802534_38804414_38804682
transcript_145593.known	chrX	+	1889	3	FSM	ENSG00000165175.17	ENST00000378474.3	1889	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	205.5	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTCAACTAAATTGGACA	38798203	True	NA	-74	True	AATAAA	-9	NA	38801453	38806433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_38801488_38804309_38804414_38804682
transcript_145594.nnic	chrX	+	813	3	NNC	ENSG00000289068.1	novel	357	2	NA	NA	-55	1897	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTTCTTTTGTGTGTT	39653013	True	NA	NA	False	AATACA	-18	NA	39653194	39673211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_39653462_39671169_39671287_39672782
transcript_145595.nnic	chrX	+	412	2	FSM	ENSG00000289068.1	ENST00000688474.1	357	2	-55	0	-55	0	multi-exon	FALSE	canonical	2	11	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGTGGTATTTTGTTA	39653013	True	NA	5	True	AATAAA	-16	NA	39653194	39671314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_39653462_39671169
transcript_145600.nnic	chrX	-	934	2	Intergenic	novelGene_71	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	5	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40146053	40144528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_40144907_40145497
transcript_145601.nnic	chrX	-	682	2	Genic_Genomic	ENSG00000183337.18	novel	288	2	NA	NA	-119	-66685	multi-exon	FALSE	canonical	3	22	junction_1	0	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40146748	40144528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chrX_-_40144907_40146444
transcript_145602.nnic	chrX	-	640	2	NNC	ENSG00000183337.18	novel	288	2	NA	NA	-100	-66685	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40146729	40144528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_40144907_40146467
transcript_145603.nnic	chrX	-	730	2	NNC	ENSG00000183337.18	novel	6338	14	NA	NA	-29	-66685	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCATGTGTCTTTGGT	NA	False	NA	-21	True	AATAAA	-21	NA	40177358	40144528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_40144907_40177006
transcript_145604.known	chrX	-	3480	3	FSM	ENSG00000183337.18	ENST00000490976.5	3480	3	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAAGGTTGCTTAAAGG	NA	False	NA	NA	False	AAAAAG	-16	NA	40077969	40071905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_40075181_40076453_40076533_40077843
transcript_145605.known	chrX	-	288	2	FSM	ENSG00000183337.18	ENST00000412952.1	288	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATGCGCCCATCTGGGC	NA	False	NA	NA	False	NA	NA	NA	40146629	40077843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_40077970_40146467
transcript_145608.known	chrX	+	2242	9	FSM	ENSG00000182220.15	ENST00000636580.2	2242	9	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_3	25.6259146178239	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAATGCATACTTTATGT	40570494	True	NA	NA	False	NA	NA	NA	40580969	40606848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_14561.known	chr1	+	517	5	FSM	ENSG00000154309.9	ENST00000457636.5	517	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	36.5136960605195	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTTGTTTTTTTTGGTA	222813398	True	NA	3	True	AATAAA	-16	NA	222815077	222837383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222823855_222823946_222835118_222835216_222836995_222837067_222837218
transcript_145610.known	chrX	+	1254	9	FSM	ENSG00000182220.15	ENST00000447485.6	1254	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	329.080703437622	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATAGATTCCATAATATG	40570560	True	NA	95	True	NA	NA	NA	40581035	40605946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600781_40600882_40605560
transcript_145615.known	chrX	+	1862	9	FSM	ENSG00000182220.15	ENST00000637526.1	1862	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	332.782375397196	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATAAAACATTTTTATTT	40570461	True	NA	NA	False	NA	NA	NA	40580936	40606466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581072_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_145617.known	chrX	+	1904	8	FSM	ENSG00000182220.15	ENST00000636287.1	1904	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	447.726775283903	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTCATTGCAGTACTA	40570522	True	NA	25	True	AATAAA	-19	NA	40580997	40606637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_145619.known	chrX	+	1877	8	FSM	ENSG00000182220.15	ENST00000636251.1	1877	8	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_7	442.313629610004	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAATGATGATTCCAAA	40570494	True	NA	5	True	NA	NA	NA	40580969	40606617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40591233_40591366_40597248_40597345_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605563
transcript_145621.known	chrX	+	1093	7	FSM	ENSG00000182220.15	ENST00000423649.2	1093	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	368.257910830017	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTATAGATTCCATAATAT	40570506	True	NA	94	True	NA	NA	NA	40580981	40605945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_145623.known	chrX	+	1187	7	FSM	ENSG00000182220.15	ENST00000636970.1	1187	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	465.37392373111	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTAATGAATTTGGAAAT	40570484	True	NA	NA	False	NA	NA	NA	40580959	40606010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40591233_40591366_40597526_40597665_40598680_40598735_40599591_40599742_40600761_40600882_40605560
transcript_145626.known	chrX	+	1995	9	FSM	ENSG00000182220.15	ENST00000635774.1	1995	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	332.320980943124	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAGAATATTAAGTGGAAG	40570461	True	NA	-73	True	NA	NA	NA	40580936	40606539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40581103_40588985_40589117_40591233_40591366_40597248_40597345_40597526_40597665_40598651_40598735_40599591_40599742_40600761_40600882_40605560
transcript_145628.known	chrX	+	900	2	FSM	ENSG00000234636.2	ENST00000456333.2	900	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATATGGGTCATTTA	40735385	False	NA	8	True	GATAAA	-21	NA	40735399	40738701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_40735791_40738192
transcript_14563.known	chr1	+	362	4	FSM	ENSG00000154309.9	ENST00000444858.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	37.6504389822424	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813371	True	NA	4	True	AATAAA	-17	NA	222815050	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222835118_222835216_222836995_222837067_222837218
transcript_145631.known	chrX	-	520	5	FSM	ENSG00000180182.11	ENST00000482034.5	520	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	94.3649829120951	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATCGGCTTGTAACCACA	NA	False	NA	NA	False	AAAACA	-33	NA	40735858	40713831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_40713908_40714536_40714711_40726745_40726852_40729318_40729346_40735721
transcript_145632.known	chrX	+	835	2	FSM	ENSG00000223714.1	ENST00000452501.1	835	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTCTCGGTGGCTCTGT	41275727	True	NA	NA	False	AATAAA	-40	NA	41275738	41276778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41275884_41276088
transcript_145634.known	chrX	+	4554	17	FSM	ENSG00000215301.11	ENST00000646319.1	4554	17	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_15	107.601986505826	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTGTTGTTGTCAATTG	41321352	False	NA	22	True	AATAAA	-19	NA	41334174	41350209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215_41343352_41343736_41343823_41344029_41344129_41344238_41344400_41345179_41345325_41345403_41345549_41346228_41346411_41346504_41346623_41346858_41347013_41347314_41347452_41347639
transcript_145639.nic	chrX	+	984	7	ISM	ENSG00000215301.11	ENST00000441189.4	4122	16	-241	6536	8	-85	5prime_fragment	FALSE	canonical	3	591	junction_6	26.4868940337586	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGACTTGATGGCTTGTGCC	41333592	True	NA	NA	False	NA	NA	NA	41333920	41343324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_41334298_41337407_41337466_41339035_41339084_41341483_41341617_41342494_41342654_41342736_41342837_41343215
transcript_145643.known	chrX	+	1434	3	FSM	ENSG00000215301.11	ENST00000643821.1	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	330	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCAATTTGTGGATTTCAA	41333968	False	NA	NA	False	ATTAAA	-22	NA	41334011	41338780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_41334298_41337407_41337466_41337690
transcript_145651.nnic	chrX	-	390	2	Antisense	novelGene_ENSG00000231772.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTTCAAAATAACCAGTG	NA	False	NA	NA	False	AATAAA	-17	NA	42430892	42424134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_42424428_42430795
transcript_145654.nnic	chrX	+	717	5	NNC	ENSG00000224294.1	novel	2228	6	NA	NA	-17	-16211	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTGTACATAGTCTT	43176927	True	NA	NA	False	AATATA	-13	NA	43176976	43210387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_43177206_43196196_43196370_43196652_43196749_43197315_43197376_43210228
transcript_145657.known	chrX	+	3931	15	FSM	ENSG00000189221.11	ENST00000338702.4	3931	15	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_13	5.71473212541989	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGACTCGACTCCTGTAT	43655912	True	NA	19	True	AATAAA	-19	NA	43656298	43746817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_43656415_43683512_43683608_43693290_43693429_43711871_43711977_43712704_43712797_43728172_43728315_43731240_43731391_43731693_43731854_43732698_43732796_43736226_43736281_43740680_43740739_43741949_43742048_43743793_43743906_43744108_43744172_43744366
transcript_145659.known	chrX	-	2570	15	FSM	ENSG00000069535.14	ENST00000378069.5	2570	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.81848852242127	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGTCCTTTCTTTTTG	NA	False	NA	NA	False	AATAAA	-16	NA	43882450	43766609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_43767619_43768653_43768717_43769306_43769419_43775174_43775273_43778681_43778740_43780341_43780396_43781447_43781545_43793418_43793579_43795738_43795889_43797124_43797267_43802171_43802264_43803299_43803405_43838867_43839006_43843669_43843765_43882253
transcript_145660.nnic	chrX	-	516	2	NNC	ENSG00000069535.14	novel	2570	15	NA	NA	12	-11861	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGTTGTTGTGTTATGA	NA	False	NA	NA	False	AATAAA	-17	NA	43882423	43855660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_43856007_43882253
transcript_145661.known	chrX	-	1719	3	FSM	ENSG00000124479.11	ENST00000642620.1	1719	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGACTGTTTAAGTATTT	NA	False	NA	-2	True	AATAAA	-17	NA	43973390	43948775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_43950027_43958471_43958853_43973303
transcript_145662.known	chrX	-	3257	15	FSM	ENSG00000183690.13	ENST00000420999.2	3257	15	0	0	0	0	multi-exon	TRUE	non_canonical	1	11	junction_9	4.23782770691181	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGTGTAAGAAGTCTATC	NA	False	NA	NA	False	ATTAAA	-26	NA	44343672	44147871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_44148897_44163921_44164028_44176291_44176385_44178366_44178565_44229648_44229780_44232480_44232678_44235304_44235448_44242120_44242290_44248271_44248411_44248802_44248917_44250193_44250446_44261074_44261299_44272685_44272837_44312567_44312757_44343546
transcript_145667.known	chrX	-	1054	5	FSM	ENSG00000069509.6	ENST00000378045.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_4	31.855140872393	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTTTTATGTTGTTT	NA	False	NA	-4	True	ATTAAA	-33	NA	44542859	44523638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944_44542102_44542804
transcript_14567.nic	chr1	+	629	4	NIC	ENSG00000154309.9	novel	890	6	NA	NA	-24	0	intron_retention	FALSE	canonical	3	27	junction_1	30.2250815640844	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813318	True	NA	4	True	AATAAA	-17	NA	222814997	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222836995
transcript_145676.known	chrX	-	1069	4	FSM	ENSG00000069509.6	ENST00000483115.1	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	8.99382504215469	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTAAGGCTGACTTTTT	NA	False	NA	20	True	TTTAAA	-18	NA	44542304	44523771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_44524276_44527236_44527366_44538466_44538543_44541944
transcript_145679.known	chrX	-	1458	3	FSM	ENSG00000231566.3	ENST00000456532.2	1458	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAACACTTACCAGTAGAA	NA	False	NA	NA	False	AAAAAG	-13	NA	45851541	45847041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_45848214_45849374_45849473_45851353
transcript_14568.nnic	chr1	+	406	4	NIC	ENSG00000154309.9	novel	362	4	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	21.4527905462721	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813318	True	NA	4	True	AATAAA	-17	NA	222814997	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815079_222823883_222823946_222835118_222835216_222837218
transcript_145681.known	chrX	-	689	2	FSM	ENSG00000231566.3	ENST00000666464.2	692	2	3	0	3	0	multi-exon	FALSE	canonical	2	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTTTGGCTGGGTGTGG	NA	False	NA	NA	False	NA	NA	NA	45851532	45848962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_45849473_45851353
transcript_145682.known	chrX	-	965	3	FSM	ENSG00000236751.3	ENST00000670979.1	965	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTTAGTGAGTCCTTCT	NA	False	NA	NA	False	AATAAA	-19	NA	46327680	46314044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46314167_46325741_46326455_46327550
transcript_145687.known	chrX	+	993	7	FSM	ENSG00000147121.16	ENST00000377919.6	993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	31.1202863454407	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGCTGCATATTAAATT	46446540	True	NA	NA	False	AATAAA	-18	NA	46447293	46472526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472024
transcript_145692.known	chrX	+	1354	6	FSM	ENSG00000147121.16	ENST00000298190.10	1354	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	19.4586741583285	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGAGTCTTGCTC	46446538	True	NA	NA	False	NA	NA	NA	46447291	46473669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463294_46472749
transcript_145695.known	chrX	+	2334	6	FSM	ENSG00000147121.16	ENST00000344302.9	2334	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	24.0283166285115	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTATTTATTTATTTT	46446543	True	NA	16	True	AATAAA	-16	NA	46447296	46474639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46472749
transcript_145702.known	chrX	+	585	5	FSM	ENSG00000147121.16	ENST00000476762.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	7.39509972887452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCTCTGCCTGGCCGCCGG	46446543	True	NA	NA	False	NA	NA	NA	46447296	46463449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46447347_46448199_46448311_46450430_46450476_46462747_46462875_46463197
transcript_145709.known	chrX	+	1247	6	FSM	ENSG00000147121.16	ENST00000487081.1	1247	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.814789663696	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTGATGAAATTTTGCA	46447479	False	NA	84	True	CATAAA	-26	NA	46448232	46473594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46448311_46450430_46450476_46462747_46462875_46463197_46463309_46471141_46471186_46472752
transcript_145715.known	chrX	-	591	6	FSM	ENSG00000251192.8	ENST00000522017.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.03315017762062	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTCCAGATGGCATCC	NA	False	NA	NA	False	NA	NA	NA	46545457	46522999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46523126_46528349_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
transcript_145716.known	chrX	-	576	6	FSM	ENSG00000251192.8	ENST00000521626.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.03315017762062	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCATCCTCCTACC	NA	False	NA	NA	False	NA	NA	NA	46545420	46522992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46523126_46528334_46528446_46528782_46528910_46542072_46542117_46544500_46544612_46545370
transcript_145719.nnic	chrX	-	426	4	NNC	ENSG00000251192.8	novel	4040	6	NA	NA	-17	-12682	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.29983164553722	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATGCATACACATAGTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	46545474	46540404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_46540572_46542072_46542117_46544500_46544612_46545370
transcript_145720.nnic	chrX	+	536	3	NNC	ENSG00000230844.3	novel	672	3	NA	NA	-19	-172	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_2	25.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGCTTCTTAAATATG	46544774	True	NA	NA	False	AATAAA	-19	NA	46545473	46548236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_46545628_46546465_46546604_46547992
transcript_145721.nnic	chrX	+	573	3	NNC	ENSG00000230844.3	novel	672	3	NA	NA	-19	-172	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	27	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGCTTCTTAAATATG	46544774	True	NA	NA	False	AATAAA	-19	NA	46545473	46548236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_46545628_46546465_46546641_46547992
transcript_145723.known	chrX	+	2078	2	FSM	ENSG00000230844.3	ENST00000421685.2	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTTTGTGAAAATACTT	46544793	True	NA	NA	False	AATATA	-20	NA	46545492	46548408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46545628_46546465
transcript_145728.nnic	chrX	+	651	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	7	-307	multi-exon	FALSE	canonical	3	22	junction_1	1.5	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGGGCAGTATTGTT	46544800	True	NA	13	True	ATTAAA	-28	NA	46545499	46598189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_145729.nnic	chrX	+	862	3	Fusion	ENSG00000230844.3_ENSG00000147119.4	novel	672	3	NA	NA	7	-96	multi-exon	FALSE	canonical	3	22	junction_1	1.5	62	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGGATTTGTTTTGTTT	46544800	True	NA	21	True	ATTAAA	-21	NA	46545499	46598400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chrX_+_46545628_46563258_46563352_46597759
transcript_145732.known	chrX	+	3700	5	FSM	ENSG00000102218.6	ENST00000218340.4	3700	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	15.945218719102	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAATGGTTTGTATA	46835427	True	NA	99	True	AATAAA	-18	NA	46837042	46882358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_46837203_46853475_46854142_46859987_46860103_46877504_46877591_46879685
transcript_145733.known	chrX	-	428	3	FSM	ENSG00000204904.7	ENST00000618037.1	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAACATATCAGAAGAAAAT	NA	False	NA	-7	True	AATAAA	-16	NA	46894592	46887420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_46887693_46890292_46890380_46894523
transcript_145734.known	chrX	+	1611	7	FSM	ENSG00000130988.13	ENST00000352078.8	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.5374989832438	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCCTTTTTATTT	47078252	True	NA	26	True	AATAAA	-20	NA	47078379	47093313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47078710_47081129_47081308_47084417_47084601_47089775_47089992_47091677_47091810_47092060_47092216_47092896
transcript_145735.nic	chrX	+	1465	6	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	3	5	junction_3	7.863841300535	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTATGTTCCTTTTTA	NA	False	NA	23	True	AATAAA	-17	NA	47078306	47093310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47091677_47091810_47092060_47092216_47092896
transcript_145736.nic	chrX	+	1333	5	NIC	ENSG00000130988.13	novel	2041	7	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	9.02773504263389	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTATTATGTTCCTTTTTA	NA	False	NA	23	True	AATAAA	-17	NA	47078306	47093310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47078710_47081129_47081308_47084417_47084601_47092060_47092216_47092896
transcript_145739.known	chrX	-	586	3	FSM	ENSG00000147123.12	ENST00000377811.4	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	1468	junction_1	246	18746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGCTAGTGTTGATTGTGT	NA	False	NA	-6	True	ATTAAA	-17	NA	47144702	47142215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47142441_47142613_47142745_47144472
transcript_14574.nic	chr1	+	683	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	30	junction_1	28.9865869364129	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813357	True	NA	4	True	AATAAA	-17	NA	222815036	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222836995
transcript_145741.known	chrX	-	948	3	FSM	ENSG00000147123.12	ENST00000687244.1	1525	3	428	149	-328	-4	multi-exon	FALSE	canonical	3	708	junction_1	626	8605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGCTAGTGTTGATT	NA	False	NA	-10	True	ATTAAA	-13	NA	47145038	47142219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47142441_47142583_47142745_47144472
transcript_145749.known	chrX	+	3397	24	FSM	ENSG00000182872.16	ENST00000377604.8	3397	24	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_10	60.392071238127	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136000	True	NA	28	True	AATAAA	-17	NA	47145220	47186813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47171027_47171259_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180041_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_14575.nnic	chr1	+	460	4	NIC	ENSG00000154309.9	novel	764	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_3	21.0607586652417	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813357	True	NA	4	True	AATAAA	-17	NA	222815036	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_222815172_222823883_222823946_222835118_222835216_222837218
transcript_145750.known	chrX	+	3105	23	FSM	ENSG00000182872.16	ENST00000628161.2	3105	23	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	80.3714645508565	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGCCTCTCCTCTTTCT	47136058	True	NA	28	True	AATAAA	-17	NA	47145278	47186813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47145486_47147356_47147499_47169314_47169499_47173127_47173198_47175018_47175093_47176499_47176587_47179102_47179164_47179318_47179496_47179879_47180038_47180211_47180310_47180418_47180507_47181214_47181402_47181506_47181647_47181748_47181867_47181950_47182043_47182161_47182327_47185054_47185205_47185301_47185368_47185441_47185631_47185715_47185791_47186064_47186172_47186257_47186388_47186473
transcript_145753.nnic	chrX	+	685	3	NNC	ENSG00000182872.16	novel	3108	23	NA	NA	-20	-20158	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	122	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTTCCAAGTGTGTTT	47135980	True	NA	NA	False	AATATA	-15	NA	47145200	47161385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_47145486_47147356_47147499_47161127
transcript_145762.known	chrX	+	3466	26	FSM	ENSG00000130985.17	ENST00000377351.8	3466	26	0	0	0	0	multi-exon	TRUE	canonical	3	275	junction_1	269.732774426839	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47187734	True	NA	14	True	AATAAA	-17	NA	47190860	47215128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47190951_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_145767.known	chrX	+	3572	26	FSM	ENSG00000130985.17	ENST00000335972.11	3572	26	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	238.456959638422	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCGCCTGCCCTGCTGGTT	47180108	True	NA	14	True	AATAAA	-17	NA	47193828	47215128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47194025_47198802_47198920_47199047_47199107_47199208_47199378_47199479_47199615_47200893_47201001_47201275_47201367_47201477_47201611_47202155_47202254_47202357_47202505_47202637_47202815_47202942_47203048_47203133_47203215_47203540_47203697_47205947_47206114_47206247_47206445_47209622_47209688_47209927_47210124_47210841_47210917_47211035_47211226_47212423_47212513_47212770_47212864_47212989_47213182_47214326_47214429_47214536_47214638_47214793
transcript_14579.known	chr1	+	373	4	FSM	ENSG00000154309.9	ENST00000669958.1	373	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	35.873233599564	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGCCCTTGTTTTTTTTG	222813449	True	NA	0	True	AATAAA	-13	NA	222815128	222837380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222835118_222835216_222836995_222837067_222837218
transcript_145792.nic	chrX	+	2224	17	NIC	ENSG00000102225.17	novel	3158	16	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	281.712813650711	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGTCTGTCTGTCTCTG	47217385	True	NA	26	True	NA	NA	NA	47218241	47228990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47218665_47222260_47222343_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_145795.known	chrX	+	3158	16	FSM	ENSG00000102225.17	ENST00000457458.6	3158	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	204.708855586551	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTTGCAAATCCCTGT	47217376	True	NA	15	True	ATTAAA	-17	NA	47218232	47229997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47218665_47223551_47223760_47224384_47224519_47224617_47224744_47224833_47224891_47224987_47225103_47225771_47225867_47225964_47226028_47226278_47226403_47226582_47226704_47226811_47226910_47226993_47227100_47227180_47227224_47227378_47227470_47228566_47228645_47228730
transcript_145798.known	chrX	+	3196	21	FSM	ENSG00000102226.10	ENST00000377107.7	3196	21	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_4	54.7231897827603	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGCAGTGTGGTTTTTTC	47230777	True	NA	19	True	TATAAA	-19	NA	47233008	47248328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47233220_47239069_47239180_47239350_47239482_47239789_47239908_47240304_47240451_47240586_47240649_47240773_47240877_47241276_47241451_47241540_47241700_47242081_47242307_47242438_47242523_47242625_47242721_47243395_47243603_47244497_47244551_47244681_47244925_47245015_47245087_47245369_47245483_47247071_47247222_47247303_47247420_47247610_47247700_47247792
transcript_145812.known	chrX	+	2378	16	FSM	ENSG00000078061.14	ENST00000377045.9	2378	16	0	0	0	0	multi-exon	FALSE	non_canonical	2	193	junction_12	41.4549822766282	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCTTGTTTATTTTGTT	47556737	True	NA	28	True	NA	NA	NA	47561204	47571908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251_47565351_47566638_47566781_47566883_47566912_47566985_47567132_47567229_47567433_47568717_47568895_47568986_47569034_47569538_47569658_47569892_47570025_47570877_47571013_47571322
transcript_145819.known	chrX	-	2489	9	FSM	ENSG00000126759.14	ENST00000396992.8	2489	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.91547594742265	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAGTGCTTTTAGCATTT	NA	False	NA	NA	False	AGTAAA	-16	NA	47629930	47623281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47624441_47626057_47626170_47626327_47626520_47626772_47626947_47627140_47627333_47627470_47627642_47628101_47628278_47629523_47629675_47629768
transcript_145824.known	chrX	+	1271	6	FSM	ENSG00000078061.14	ENST00000377039.2	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	30.6659420204239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTGTATGTGCATTA	47556754	True	NA	NA	False	AATAAA	-20	NA	47561221	47565975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47561252_47562908_47563064_47563225_47563330_47564796_47564900_47564984_47565140_47565251
transcript_145827.known	chrX	+	626	5	FSM	ENSG00000102265.12	ENST00000377017.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	195.11198707409	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578784	False	NA	12	True	AATAAA	-17	NA	47582449	47586789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47582475_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_145831.known	chrX	+	769	6	FSM	ENSG00000102265.12	ENST00000218388.9	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_4	26.2800304413827	1560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACTGTTTCTGTGTAGTG	47578770	True	NA	12	True	AATAAA	-17	NA	47582435	47586789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47582475_47583407_47583537_47584935_47585016_47585204_47585332_47585542_47585668_47586520
transcript_145832.known	chrX	-	2876	7	FSM	ENSG00000126767.18	ENST00000376983.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	59.3784940492394	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650563	47635520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47649920_47650027_47650422
transcript_145834.known	chrX	-	736	6	FSM	ENSG00000126767.18	ENST00000343894.8	736	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	72.2274186164783	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCCCTTCTGGGGTCACT	NA	False	NA	NA	False	NA	NA	NA	47650591	47636810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47636928_47637012_47637053_47639278_47639339_47641231_47641476_47649920_47650027_47650422
transcript_145835.known	chrX	-	2695	6	FSM	ENSG00000126767.18	ENST00000247161.7	2695	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_5	21.4326853193901	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGAGGCTGCTGGCACT	NA	False	NA	-5	True	AATATA	-16	NA	47650488	47635520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47636928_47637012_47637115_47637750_47638183_47638894_47639339_47641231_47641476_47650422
transcript_145847.known	chrX	-	574	7	FSM	ENSG00000126756.12	ENST00000333119.7	574	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_6	77.8388648997973	8782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTCACATGGCCCTTCTTT	NA	False	NA	-6	True	ATTAAA	-17	NA	47659161	47651797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829_47658937_47659114
transcript_145871.known	chrX	+	565	2	FSM	ENSG00000267064.2	ENST00000591832.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTTCCTTCCTTCCTTTC	47658814	True	NA	NA	False	NA	NA	NA	47658832	47660111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47659181_47659894
transcript_145872.known	chrX	-	773	6	FSM	ENSG00000126756.12	ENST00000335890.3	773	6	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_5	37.4838631947135	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACATGGCCCTTCTTTTT	NA	False	NA	-4	True	ATTAAA	-19	NA	47659180	47651795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657571_47657640_47657781_47657864_47658829
transcript_145873.known	chrX	-	627	5	FSM	ENSG00000126756.12	ENST00000485641.5	627	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	241.61384480199	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTCACATGGCCCTTC	NA	False	NA	-9	True	ATTAAA	-14	NA	47659107	47651800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47651896_47652080_47652145_47657182_47657291_47657781_47657864_47658829
transcript_145881.nnic	chrX	-	806	4	Antisense	novelGene_ENSG00000188459.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	2.86744175568088	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTTGCTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	47806911	47803098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_47803422_47803975_47804155_47804583_47804725_47806748
transcript_145883.nnic	chrX	-	700	4	Antisense	novelGene_ENSG00000188459.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	1.24721912892465	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTCTTGCTTCCTAGTT	NA	False	NA	NA	False	AATAAA	-25	NA	47806831	47803098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_47803422_47803975_47804155_47804609_47804725_47806748
transcript_145887.known	chrX	+	11230	5	FSM	ENSG00000197779.15	ENST00000338637.13	11230	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	3.16227766016838	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTGTGGACATAGTTTT	47836060	True	NA	5	True	AATAAA	-25	NA	47836901	47925627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47836988_47846104_47846322_47887998_47888126_47895844_47895941_47914923
transcript_145895.nic	chrX	+	758	4	NIC	ENSG00000197779.15	novel	11349	6	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.6562449087639	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47836050	True	NA	16	True	AATAAA	-16	NA	47836891	47861045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47836988_47842649_47842769_47846104_47846322_47860719
transcript_145898.nic	chrX	+	746	4	NIC	ENSG00000197779.15	novel	610	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	10.3387082795139	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47836082	True	NA	16	True	AATAAA	-16	NA	47836923	47861045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47837008_47842649_47842769_47846104_47846322_47860719
transcript_145899.nnic	chrX	+	715	3	NNC	ENSG00000197779.15	novel	475	2	NA	NA	-451	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	NA	False	NA	16	True	AATAAA	-16	NA	47836450	47861045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_47836623_47846104_47846322_47860719
transcript_14590.known	chr1	+	556	3	FSM	ENSG00000154309.9	ENST00000426045.5	556	3	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_2	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTACTGTTATGTGAGAG	222813357	True	NA	-41	True	NA	NA	NA	222815036	222837339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222835118_222835216_222836922
transcript_145900.nic	chrX	+	662	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	2	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47836027	True	NA	16	True	AATAAA	-16	NA	47836868	47861045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47836988_47846104_47846322_47860719
transcript_145902.nnic	chrX	+	649	3	NIC	ENSG00000197779.15	novel	475	2	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	7.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47836060	True	NA	16	True	AATAAA	-16	NA	47836901	47861045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_47837008_47846104_47846322_47860719
transcript_145904.known	chrX	+	475	2	FSM	ENSG00000197779.15	ENST00000483520.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGTTTTACTGAGTTCTA	47845331	False	NA	16	True	AATAAA	-16	NA	47846172	47861045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47846322_47860719
transcript_145905.known	chrX	+	610	4	FSM	ENSG00000197779.15	ENST00000334937.8	610	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.79271573232759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGCCCCCCAGAATGTG	47836104	True	NA	NA	False	AATAAA	-20	NA	47836945	47888210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_47837008_47842649_47842769_47846104_47846322_47887998
transcript_145906.known	chrX	-	3586	7	FSM	ENSG00000147118.12	ENST00000396965.5	3586	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	14.8483070490283	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGTTTTACTGTTATAG	NA	False	NA	-10	True	AATAAA	-15	NA	48003978	47974851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_47988523_47988618_48002594_48002654_48003507_48003703_48003903
transcript_14591.known	chr1	+	543	3	FSM	ENSG00000154309.9	ENST00000450784.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	43.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813342	True	NA	4	True	AATAAA	-17	NA	222815021	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815079_222835118_222835216_222836995
transcript_145910.known	chrX	-	3499	6	FSM	ENSG00000147118.12	ENST00000376943.8	3499	6	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	14.3721953785773	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTACTGTTATAGT	NA	False	NA	-9	True	AATAAA	-16	NA	48003989	47974850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_47977798_47982948_47983039_47983284_47983412_48002594_48002654_48003507_48003703_48003908
transcript_145913.known	chrX	-	2455	5	FSM	ENSG00000221994.12	ENST00000409324.7	2455	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.76085931090146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTGTTGTTTGGTCAT	NA	False	NA	1	True	AATAAA	-24	NA	48071116	48058213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071064
transcript_145914.known	chrX	-	988	5	FSM	ENSG00000221994.12	ENST00000428686.1	988	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATGCTTCCTGTTCTGTGC	NA	False	NA	NA	False	AAGAAA	-43	NA	48071634	48059797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48060204_48060449_48060546_48060818_48060946_48066871_48067062_48071465
transcript_145915.known	chrX	+	1268	2	FSM	ENSG00000287757.2	ENST00000668079.1	1268	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTACTCTGTCCCT	48071195	True	NA	NA	False	TTTAAA	-7	NA	48071225	48078721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48071527_48077754
transcript_145916.known	chrX	+	1223	8	FSM	ENSG00000126752.8	ENST00000376919.4	1223	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGTTCCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	48255391	48267444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48255433_48257221_48257311_48257745_48257861_48258535_48258632_48261765_48261816_48263781_48263918_48266286_48266392_48266853
transcript_145917.known	chrX	-	1270	8	FSM	ENSG00000165584.16	ENST00000298396.7	1270	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGCTCGTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	48356703	48346426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48347036_48347499_48347605_48349986_48350123_48352099_48352150_48353998_48354095_48354631_48354747_48355180_48355270_48356633
transcript_145918.known	chrX	+	1209	8	FSM	ENSG00000268009.6	ENST00000595689.3	1209	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.8070158058105	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGCATCTCTCATTA	NA	False	NA	NA	False	AATAAA	-20	NA	48383538	48393347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48383565_48384033_48384123_48384560_48384676_48385351_48385448_48387310_48387361_48389345_48389482_48391868_48391974_48392755
transcript_145919.known	chrX	-	1278	8	FSM	ENSG00000269791.6	ENST00000595235.6	1278	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.8070158058105	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTGTTTGCATCTCTC	NA	False	NA	NA	False	AATAAA	-16	NA	48411960	48402081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48402670_48403451_48403557_48405943_48406080_48408064_48408115_48409977_48410074_48410749_48410865_48411303_48411393_48411861
transcript_145926.nic	chrX	-	1964	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_15	57.7066913123792	359	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48468459	48458543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468304
transcript_145930.nic	chrX	-	2151	16	NIC	ENSG00000017483.16	novel	1990	17	NA	NA	-209	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_15	56.5773413616755	310	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGACTCAGCCTTCTGA	NA	False	NA	-12	True	AATAAA	-16	NA	48469226	48458543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_48459035_48459535_48459640_48459731_48459877_48460648_48460765_48460985_48461087_48461717_48461798_48462006_48462145_48462232_48462292_48462897_48462981_48466014_48466094_48466229_48466323_48466798_48466873_48466961_48467078_48467709_48467786_48467871_48467926_48468884
transcript_145937.known	chrX	+	1986	14	FSM	ENSG00000068438.15	ENST00000019019.6	1986	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	104.786568089956	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48473687	True	NA	16	True	ATTAAA	-20	NA	48476160	48486299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48476397_48476562_48476669_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_14594.known	chr1	+	621	3	FSM	ENSG00000154309.9	ENST00000661663.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813430	True	NA	4	True	AATAAA	-17	NA	222815109	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222835118_222835216_222836922
transcript_145942.known	chrX	+	1899	13	FSM	ENSG00000068438.15	ENST00000348411.3	1899	13	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_9	41.1713054066651	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTTCCATTGTAATTGT	48473725	True	NA	14	True	AATATA	-26	NA	48476198	48486350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596_48482795_48482985_48483028_48485735
transcript_145947.nic	chrX	+	1903	13	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	54.0509019351204	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48476108	False	NA	16	True	ATTAAA	-20	NA	48476137	48486299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48482795_48482985_48483028_48485735
transcript_14595.known	chr1	+	445	3	FSM	ENSG00000154309.9	ENST00000420335.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	40.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCAGAGCTGTCTCTCCAC	222813449	True	NA	-80	True	NA	NA	NA	222815128	222837300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815172_222835118_222835216_222836995
transcript_145962.nic	chrX	+	2094	12	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-15	0	intron_retention	FALSE	canonical	3	104	junction_9	55.171408333671	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAATTTTGTTTCAATTT	48476108	False	NA	16	True	ATTAAA	-20	NA	48476137	48486299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596_48483028_48485735
transcript_145967.nic	chrX	+	1463	11	ISM	ENSG00000068438.15	ENST00000348411.3	1899	13	-61	3396	-15	0	5prime_fragment	FALSE	canonical	3	159	junction_9	41.1107042021905	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48476108	False	NA	31	True	TATAAA	-45	NA	48476137	48482954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482402_48482507_48482596
transcript_145968.nic	chrX	+	1457	11	NIC	ENSG00000068438.15	novel	1986	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	104	junction_9	56.9160785718763	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48476108	False	NA	31	True	TATAAA	-45	NA	48476137	48482954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48476397_48477960_48478169_48478448_48478519_48478616_48478708_48479037_48479117_48481150_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_14598.known	chr1	+	583	3	FSM	ENSG00000154309.9	ENST00000663328.2	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTGTTTTTTTTGGTAT	222813679	False	NA	4	True	AATAAA	-17	NA	222815358	222837384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_222815456_222835118_222835216_222836995
transcript_145983.known	chrX	+	736	6	FSM	ENSG00000068438.15	ENST00000466371.5	736	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	72.7532817129234	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGAGTCACTTTTCTTT	48481144	True	NA	31	True	TATAAA	-45	NA	48481164	48482954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48481204_48481288_48481343_48481425_48481529_48481631_48481716_48482408_48482507_48482596
transcript_145984.known	chrX	-	653	2	FSM	ENSG00000224292.1	ENST00000445586.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATACTATTTTTCACTT	NA	False	NA	NA	False	ATTAAA	-21	NA	48508838	48506522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48507056_48508718
transcript_145988.known	chrX	+	1867	15	FSM	ENSG00000102312.24	ENST00000326194.11	1867	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	48.3908934762376	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507826	True	NA	16	True	AATAAA	-17	NA	48508991	48520808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_145996.known	chrX	+	1848	14	FSM	ENSG00000102312.24	ENST00000355961.8	1848	14	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	40.8987782112326	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTCACTGCTCAGAGG	48507836	True	NA	22	True	AATAAA	-23	NA	48509001	48520814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48512834_48512853_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_145997.known	chrX	+	1877	14	FSM	ENSG00000102312.24	ENST00000359882.8	1877	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	46.0615744308991	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGCTTCTTCTTCACTG	48507796	True	NA	14	True	AATAAA	-15	NA	48508961	48520806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514126_48514142_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_146006.nic	chrX	+	1919	14	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	35.7305829257377	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507824	True	NA	16	True	AATAAA	-17	NA	48508989	48520808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48509104_48509423_48509578_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_146007.known	chrX	+	2079	14	FSM	ENSG00000102312.24	ENST00000683923.1	2079	14	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	36.629926007159	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAATATTCAATAGGCTTC	48507853	True	NA	4	True	AATAAA	-5	NA	48509018	48520796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48509104_48509423_48509708_48509783_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_146009.nic	chrX	+	1771	13	NIC	ENSG00000102312.24	novel	1867	15	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	42	junction_2	30.9448434045696	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507818	True	NA	16	True	AATAAA	-17	NA	48508983	48520808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48509104_48509783_48509957_48511365_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_146012.nic	chrX	+	2196	13	NIC	ENSG00000102312.24	novel	2079	14	NA	NA	-2	0	intron_retention	FALSE	canonical	3	63	junction_2	25.7115408587921	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCTTCTTCTTCACTGCT	48507824	True	NA	16	True	AATAAA	-17	NA	48508989	48520808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48509104_48509423_48509957_48511294_48511488_48511891_48511936_48512325_48512508_48512588_48512720_48514239_48514366_48514524_48514626_48515716_48515794_48515889_48515954_48516060_48516147_48517182_48517294_48520374
transcript_14602.known	chr1	-	1056	6	FSM	ENSG00000143502.16	ENST00000344029.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.45527267879434	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCCATTTTTATCCTATA	-223363965	True	NA	-18	True	AATAAA	-17	NA	223364167	223234914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_223235101_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_146026.known	chrX	+	714	6	FSM	ENSG00000147155.11	ENST00000446158.5	714	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	420.328252678784	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGATGTGCTCTACTTCCTG	48514454	True	NA	NA	False	GGGGCT	-39	NA	48521855	48528245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48522144_48522253_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_146029.known	chrX	+	3785	6	FSM	ENSG00000068354.16	ENST00000376771.9	3785	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	7.8587530817554	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATGCATTCTGTGATTT	48538537	True	NA	13	True	AGTAAA	-15	NA	48539713	48562609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48539921_48541332_48541443_48544868_48545024_48558896_48559025_48559157_48559347_48559613
transcript_14603.known	chr1	-	2989	9	FSM	ENSG00000143502.16	ENST00000366878.9	2989	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	5.26782687642637	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAGTTTGAAGCGTGACT	-223363974	True	NA	-10	True	ATTAAA	-14	NA	223364176	223220830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_223222221_223223248_223223632_223227593_223227739_223229196_223229389_223264629_223264819_223268501_223268676_223292438_223292652_223363277_223363461_223364056
transcript_146031.known	chrX	+	1125	5	FSM	ENSG00000147155.11	ENST00000495186.6	1125	5	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_1	242.846659437597	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48514406	True	NA	15	True	AATAAA	-16	NA	48521807	48528716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48523698_48524073_48526988_48527026_48527154_48527286_48528233
transcript_146035.known	chrX	+	904	5	FSM	ENSG00000147155.11	ENST00000276096.10	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	349.160690084093	723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACACTGAGAGATCCT	48514397	True	NA	9	True	AATAAA	-10	NA	48521798	48528710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48523922_48524073_48526988_48527026_48527154_48527286_48528233
transcript_146037.known	chrX	+	796	5	FSM	ENSG00000147155.11	ENST00000498425.1	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	343.124157558164	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGCAAGAAGAACTGAGG	48514403	True	NA	NA	False	NA	NA	NA	48521804	48528439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48521908_48523753_48524073_48526988_48527026_48527154_48527286_48528233
transcript_146038.nnic	chrX	+	872	5	NNC	ENSG00000147155.11	novel	1125	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	3	68	junction_1	344.848789326568	276	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAGAGATCCTTAATTA	48514375	True	NA	15	True	AATAAA	-16	NA	48521776	48528716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_48521908_48523982_48524073_48526988_48527026_48527154_48527286_48528233
transcript_14604.known	chr1	+	3366	21	FSM	ENSG00000162909.18	ENST00000295006.6	3366	21	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_10	23.2969418593943	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAACTTTGATAATCT	223710453	True	NA	NA	False	ATTAAA	-32	NA	223712538	223776018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_223712878_223717761_223717832_223744099_223744219_223745305_223745440_223746996_223747166_223749038_223749123_223750889_223750976_223751996_223752072_223752795_223752957_223755479_223755650_223757368_223757381_223759269_223759482_223761580_223761618_223762185_223762252_223764149_223764208_223766366_223766432_223769840_223769910_223770446_223770526_223771808_223771926_223772180_223772240_223774833
transcript_146046.known	chrX	+	884	5	FSM	ENSG00000068354.16	ENST00000481090.6	884	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.8415599185145	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTGTCCTACTGCCAGGG	48538560	True	NA	NA	False	NA	NA	NA	48539736	48559886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48539921_48541332_48541443_48558896_48559025_48559157_48559347_48559613
transcript_146058.known	chrX	+	1375	8	FSM	ENSG00000102317.18	ENST00000466764.5	1375	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	265.222509587397	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	48564398	True	NA	NA	False	NA	NA	NA	48574490	48577977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48575814_48576084_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_14606.nic	chr1	+	1875	4	NIC	ENSG00000185495.10	novel	2669	3	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	5.43650214343336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTGGACTCTCTT	223991350	True	NA	12	True	AATAAA	-22	NA	223992724	224010612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_223993048_224003519_224003655_224007293_224007418_224009319
transcript_146065.known	chrX	+	4298	7	FSM	ENSG00000102317.18	ENST00000376759.8	4298	7	0	0	0	0	multi-exon	TRUE	canonical	3	502	junction_1	48.1332063710237	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTATATTCGTTTTTTTAA	48564391	True	NA	12	True	AATAAA	-22	NA	48574483	48581162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48574574_48575167_48575284_48575560_48575668_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_146076.known	chrX	+	724	6	FSM	ENSG00000102317.18	ENST00000489344.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	218.084020505859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAGCAATAATTGGTTCT	48564431	True	NA	NA	False	NA	NA	NA	48574523	48577735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48574574_48575167_48575284_48576313_48576420_48576507_48576605_48577025_48577110_48577464
transcript_146078.known	chrX	-	549	2	FSM	ENSG00000204620.3	ENST00000376775.3	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGTTTCACTGTGTTGGC	NA	False	NA	NA	False	NA	NA	NA	48574860	48568013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48568181_48574478
transcript_146081.known	chrX	+	425	1	FSM	ENSG00000279528.1	ENST00000623114.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATTCGTTTTTTTAATGC	48580707	False	NA	15	True	AATAAA	-25	NA	48580740	48581165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48580700_48581200
transcript_146083.known	chrX	+	5457	10	FSM	ENSG00000101940.18	ENST00000376729.10	5457	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	25.0338043058719	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCTCGGTTAACTTG	48596158	True	NA	23	True	AATAAA	-38	NA	48597491	48608869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48597615_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_146086.nic	chrX	+	1747	10	NIC	ENSG00000101940.18	novel	5457	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	44.1095717615537	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596158	True	NA	25	True	NA	NA	NA	48597491	48605193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48597615_48597957_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_146089.nnic	chrX	+	1877	10	NNC	ENSG00000101940.18	novel	5457	10	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	47.9909970980926	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	NA	False	NA	25	True	NA	NA	NA	48597435	48605193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_48597655_48597957_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_146097.known	chrX	+	2124	9	FSM	ENSG00000101940.18	ENST00000218056.9	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	16.4620776331543	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596158	True	NA	25	True	NA	NA	NA	48597491	48605193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48598038_48598716_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_146100.nic	chrX	+	2039	9	NIC	ENSG00000101940.18	novel	2124	9	NA	NA	9	0	intron_retention	FALSE	canonical	3	21	junction_1	43.5055671724895	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCATTGACTCATTTGTGC	48596209	True	NA	25	True	NA	NA	NA	48597542	48605193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_48598038_48598750_48598958_48599352_48599463_48599586_48599718_48600318_48600627_48601783_48601965_48602064_48602207_48604271_48604391_48604847
transcript_146105.known	chrX	+	1829	12	FSM	ENSG00000015285.11	ENST00000376701.5	1829	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1.23983469972599	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTCTGTTTACATTCC	48683785	True	NA	NA	False	AATAAA	-28	NA	48683798	48691427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48683986_48684282_48684424_48685546_48685634_48685733_48685837_48685945_48685988_48686080_48686135_48686780_48686956_48688053_48688097_48688299_48688454_48688659_48689067_48689319_48689435_48691106
transcript_146106.known	chrX	+	2736	6	FSM	ENSG00000101945.17	ENST00000376687.4	2736	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	15.357083056362	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGATGTGAGGTGCTTGT	48695986	True	NA	NA	False	AATAAA	-22	NA	48696733	48709016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48696804_48698901_48699048_48700090_48700754_48706264_48706412_48706497_48706628_48707436
transcript_146108.known	chrX	+	740	4	FSM	ENSG00000171433.12	ENST00000303227.11	740	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACGGGGTCTTCGTTACTGT	48761736	True	NA	NA	False	AATAAA	-20	NA	48761746	48773648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48761854_48765834_48765973_48770926_48771083_48773309
transcript_146109.known	chrX	+	4118	29	FSM	ENSG00000094631.21	ENST00000334136.11	4118	29	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_1	28.4906671077547	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800506	True	NA	28	True	AATAAA	-19	NA	48802066	48824976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_146110.known	chrX	+	4147	29	FSM	ENSG00000094631.21	ENST00000644068.1	4147	29	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	33.6717346491937	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48800607	True	NA	28	True	AATAAA	-19	NA	48802167	48824976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608_48806707_48808032_48808138_48808257_48808327_48814439_48814567_48814674_48814741_48814833_48814894_48814961_48815052_48815383_48815491_48815574_48815643_48815883_48816053_48816140_48816270_48816464_48816634_48817325_48817460_48818040_48818110_48818219_48818413_48820105_48820256_48822619_48822795_48822911_48823589_48823671_48823786_48823921_48824069_48824165_48824295_48824543
transcript_146116.known	chrX	+	736	8	FSM	ENSG00000094631.21	ENST00000376610.6	736	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	44.7099495843681	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGACTCTACAGCATTTG	48801929	False	NA	NA	False	GGGGCT	-30	NA	48801948	48806706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802023_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_146117.nic	chrX	+	1046	8	ISM	ENSG00000094631.21	ENST00000334136.11	4118	29	-55	18017	-4	0	5prime_fragment	FALSE	canonical	3	63	junction_1	24.2057507081879	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	48801992	False	NA	2	True	AATAAA	-16	NA	48802011	48806959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_146118.nic	chrX	+	1068	8	ISM	ENSG00000094631.21	ENST00000644068.1	4147	29	-48	18017	10	0	5prime_fragment	FALSE	canonical	3	12	junction_1	41.6030807336502	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	48800559	True	NA	2	True	AATAAA	-16	NA	48802119	48806959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_146120.nic	chrX	+	1031	8	ISM	ENSG00000094631.21	ENST00000643374.1	4099	29	-39	17997	10	0	5prime_fragment	FALSE	canonical	3	10	junction_1	42.2929530483628	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	48800559	True	NA	2	True	AATAAA	-16	NA	48802119	48806959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367_48806465_48806608
transcript_146121.nic	chrX	+	1191	7	ISM	ENSG00000094631.21	ENST00000334136.11	4118	29	-55	18016	-4	1	intron_retention	FALSE	canonical	3	63	junction_1	26.1448954015034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAAGGTGTACATTTTTT	48801992	False	NA	3	True	AATAAA	-17	NA	48802011	48806960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630_48805672_48806367
transcript_146124.nic	chrX	+	782	6	ISM	ENSG00000094631.21	ENST00000477528.5	4832	28	-43	19127	-4	0	5prime_fragment	FALSE	canonical	3	63	junction_1	28.2729552753157	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGTGTCAGGTGC	48801992	False	NA	NA	False	AGTAAA	-19	NA	48802011	48805855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48802143_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_146125.known	chrX	+	1999	6	FSM	ENSG00000094631.21	ENST00000462730.5	1999	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	48.3056932462417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATATTTCATTGATTCTAA	48801996	False	NA	-11	True	AATAAA	-3	NA	48802015	48806946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802273_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_146126.known	chrX	+	591	6	FSM	ENSG00000094631.21	ENST00000441703.6	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	49.0974541091491	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAATGTCATGGTCTCT	48800625	True	NA	NA	False	NA	NA	NA	48802185	48805745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48802236_48802662_48802786_48802870_48803000_48803127_48803217_48805437_48805523_48805630
transcript_146128.known	chrX	+	397	2	FSM	ENSG00000094631.21	ENST00000461608.1	397	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTAAGGTGTACATTTTT	48806408	False	NA	2	True	AATAAA	-16	NA	48806418	48806959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48806465_48806608
transcript_146129.known	chrX	+	618	3	FSM	ENSG00000094631.21	ENST00000430858.1	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	84	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAGAAAGCTTTTTGAC	48823462	False	NA	28	True	AATAAA	-19	NA	48823517	48824976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48823589_48823671_48823786_48824543
transcript_146130.known	chrX	-	1025	3	FSM	ENSG00000102109.9	ENST00000218230.6	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	27.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGTGCTTGTCTGTGTG	NA	False	NA	-8	True	AATAAA	-15	NA	48835610	48831095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48831456_48831868_48832342_48835418
transcript_14614.nnic	chr1	+	782	3	NNC	ENSG00000185495.10	novel	487	3	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	5.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTGGACTCTCTT	223991350	True	NA	12	True	AATAAA	-22	NA	223992724	224010612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_223993048_224003519_224003655_224010288
transcript_146143.known	chrX	+	784	7	FSM	ENSG00000102103.18	ENST00000470062.5	784	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	142.442581024386	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCCCTGGGTTAAAATAAA	48889836	True	NA	-20	True	NA	NA	NA	48897995	48903098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731_48902796_48902927
transcript_146144.known	chrX	+	917	7	FSM	ENSG00000102103.18	ENST00000443648.6	917	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	91.9111890178049	3189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889881	False	NA	25	True	AATAAA	-26	NA	48898040	48903143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_146149.known	chrX	+	965	7	FSM	ENSG00000102103.18	ENST00000396763.6	962	7	-4	1	-4	0	multi-exon	FALSE	canonical	2	4	junction_1	139.845152460379	1262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48898147	True	NA	24	True	AATAAA	-25	NA	48898255	48903142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898347_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_146153.known	chrX	+	675	6	ISM	ENSG00000102103.18	ENST00000472742.6	834	7	0	291	0	-58	5prime_fragment	FALSE	canonical	3	30	junction_1	161.551230264582	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGTAAGTGACAACCCCTCT	48889783	True	NA	NA	False	NA	NA	NA	48897942	48902793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_48898094_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902385_48902731
transcript_146155.known	chrX	+	760	6	FSM	ENSG00000102103.18	ENST00000376566.8	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	151.58548743201	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889752	True	NA	24	True	AATAAA	-25	NA	48897911	48903142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898083_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_146161.known	chrX	-	804	6	FSM	ENSG00000126768.12	ENST00000472645.1	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_5	401.503474455701	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTCTCAGGGCACCCCA	NA	False	NA	-107	True	NA	NA	NA	48897228	48893553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48896758_48896859_48897092
transcript_14617.known	chr1	+	1886	1	FSM	ENSG00000185495.10	ENST00000540997.2	1886	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTGGTGGACTCTCTT	NA	False	NA	12	True	AATAAA	-22	NA	224008726	224010612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224008700_224010600
transcript_146173.known	chrX	-	964	7	FSM	ENSG00000126768.12	ENST00000465150.6	964	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_5	427.19342483496	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGACTCCTTGAACTG	NA	False	NA	0	True	TTTAAA	-20	NA	48897762	48893446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895502_48896758_48896859_48897723
transcript_146174.known	chrX	-	939	7	FSM	ENSG00000126768.12	ENST00000495490.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	446.540653866538	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATGTGTGGACTCCTT	NA	False	NA	-6	True	TTTAAA	-14	NA	48897790	48893452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48893818_48893899_48894011_48894096_48894226_48895037_48895102_48895351_48895455_48896758_48896859_48897723
transcript_146175.known	chrX	-	726	2	FSM	ENSG00000126768.12	ENST00000464663.1	726	2	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	48897768	48896177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48896859_48897723
transcript_146176.known	chrX	+	938	7	FSM	ENSG00000102103.18	ENST00000376563.6	938	7	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	54.8171201967658	3072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTGAGTGCTTCCTTTGA	48889792	True	NA	25	True	AATAAA	-26	NA	48897951	48903143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902232_48902518_48902731_48902796_48902927
transcript_146177.known	chrX	+	664	6	FSM	ENSG00000102103.18	ENST00000247140.8	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	137.350063705846	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTGAGTGCTTCCTTTG	48889780	True	NA	24	True	AATAAA	-25	NA	48897939	48903142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_48898015_48898491_48898577_48901189_48901302_48901929_48902043_48902731_48902796_48902927
transcript_146178.known	chrX	-	865	5	FSM	ENSG00000102100.16	ENST00000376529.8	865	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	79.913625246262	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	48911646	48903183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48903466_48904745_48904893_48906391_48906544_48909813_48909997_48911545
transcript_146179.known	chrX	-	1456	5	FSM	ENSG00000102100.16	ENST00000247138.11	1456	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	68.3643730315725	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTTGGGTTGGGCAGCCT	NA	False	NA	-8	True	AATAAA	-19	NA	48911646	48903182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48903466_48904745_48905483_48906391_48906544_48909813_48909997_48911545
transcript_14618.known	chr1	+	5427	5	FSM	ENSG00000143756.12	ENST00000366862.10	5427	5	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_4	16.8077363139716	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGTTTTCTTTGTATT	224109320	True	NA	5	True	AATAAA	-17	NA	224114110	224162047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224114397_224130471_224130582_224134073_224134213_224153141_224153338_224157351
transcript_146180.known	chrX	-	1739	4	FSM	ENSG00000102100.16	ENST00000445167.7	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	72.9566081082904	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCACGTGTAGCTTTCTGA	NA	False	NA	-1	True	AATAAA	-18	NA	48911669	48903612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48904893_48906391_48906544_48909813_48909997_48911545
transcript_146181.known	chrX	-	3047	4	FSM	ENSG00000102100.16	ENST00000376521.6	3047	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	29.6348143611905	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTTGGGTTGGGCAGCC	NA	False	NA	-9	True	AATAAA	-18	NA	48911958	48903183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48905483_48906391_48906544_48909813_48909997_48911545
transcript_146182.known	chrX	-	2075	6	FSM	ENSG00000102096.9	ENST00000376509.4	2075	6	0	0	0	0	multi-exon	TRUE	canonical	3	1261	junction_3	92.5289143997702	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCTGGCCATTTGTAGGT	NA	False	NA	-15	True	AATAAA	-17	NA	48919024	48913181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48914295_48914394_48914572_48915019_48915393_48917780_48917832_48918535_48918646_48918773
transcript_146183.known	chrX	-	2077	10	FSM	ENSG00000068308.15	ENST00000455452.5	2077	10	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	115.079789818592	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGACTCTGTTCTGTGTGGG	NA	False	NA	-1	True	AATAAA	-22	NA	48957189	48922205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48922911_48923136_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_146185.known	chrX	-	2740	9	FSM	ENSG00000068308.15	ENST00000156084.8	2740	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	100.57211343111	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGCGACTCTGTTCTGT	NA	False	NA	-6	True	AATAAA	-17	NA	48957631	48922210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934695_48934868_48934953_48935019_48944189_48944284_48956976
transcript_146186.nnic	chrX	+	834	2	Antisense	novelGene_ENSG00000068308.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	26	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCAGACGTTCTTGGGGG	48919130	True	NA	10	True	AATAAA	-20	NA	48919254	48922681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_48919648_48922240
transcript_146188.known	chrX	-	2487	11	NNC	ENSG00000068308.15	novel	2682	10	NA	NA	-263	303	intron_retention	TRUE	non_canonical	0	0	junction_9	123.074124006633	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAAATCAACTAATCAAAA	NA	False	NA	29	True	ATTAAA	-15	NA	48957894	48922639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_48923296_48923632_48923747_48923850_48924053_48925846_48926051_48934463_48934613_48934710_48934868_48934953_48935019_48944189_48944284_48956976_48957441_48957472_48957481_48957520
transcript_146192.known	chrX	-	3031	26	FSM	ENSG00000068400.13	ENST00000376423.8	3031	26	0	0	0	0	multi-exon	TRUE	canonical	3	238	junction_16	31.7730955369476	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGTCTCGTCTCGTTCT	NA	False	NA	-5	True	NA	NA	NA	49002264	48973722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_48974286_48975154_48975310_48976017_48976112_48976240_48976364_48978304_48978436_48981214_48981315_48981415_48981473_48981595_48981692_48981794_48981873_48982978_48983093_48983227_48983441_48983774_48983871_48985267_48985403_48987784_48987878_48988120_48988199_48989610_48989711_48989834_48989883_48989971_48990004_48990684_48990733_48990925_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_146199.nic	chrX	-	664	7	ISM	ENSG00000068400.13	ENST00000376423.8	3031	26	-29	17245	-29	42	5prime_fragment	FALSE	canonical	3	296	junction_2	24.3835099105021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAAGAGATTGCTCTG	NA	False	NA	NA	False	NA	NA	NA	49002293	48990967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_48991111_48993427_48993579_48997249_48997358_48998153_48998181_48999237_48999300_48999437_48999505_49002187
transcript_146202.known	chrX	-	3279	10	FSM	ENSG00000068323.17	ENST00000493583.5	3279	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	44.9265518566515	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043410	49028725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039346_49040454_49040569_49043110
transcript_146203.known	chrX	-	3291	10	FSM	ENSG00000068323.17	ENST00000315869.8	3291	10	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_8	26.3016687261052	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTCTCCTGTCCTTGTTTT	NA	False	NA	-3	True	AATAAA	-38	NA	49043357	49028725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49030602_49031396_49031545_49033464_49033541_49033725_49033783_49034133_49034252_49038009_49038115_49038196_49038443_49039106_49039411_49040454_49040569_49043110
transcript_146214.known	chrX	-	2610	9	FSM	ENSG00000196998.19	ENST00000465806.6	2610	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	43.7733866064759	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTCAGGGGCGGGGCAT	NA	False	NA	-7	True	AATAAA	-25	NA	49080097	49074432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075946_49076429_49076525_49076644_49077912_49078040_49078113_49079938
transcript_146216.known	chrX	-	1260	3	FSM	ENSG00000243279.4	ENST00000553851.3	1260	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	13	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGCCTCCTGGGTAAAG	NA	False	NA	-4	True	AATAAA	-24	NA	49074002	49071160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49072009_49072432_49072651_49073808
transcript_146217.known	chrX	-	822	6	FSM	ENSG00000196998.19	ENST00000634671.1	822	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.0629262988973	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATCTCAGGTAAGTGCCC	NA	False	NA	NA	False	NA	NA	NA	49101170	49077652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49077748_49077884_49077912_49078040_49078113_49079938_49080096_49100204_49100555_49101049
transcript_146218.known	chrX	-	439	2	FSM	ENSG00000243279.4	ENST00000618882.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCATCCATGGCCAATTT	NA	False	NA	NA	False	NA	NA	NA	49073835	49071596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49072009_49073808
transcript_146219.known	chrX	-	1444	11	FSM	ENSG00000196998.19	ENST00000322995.13	1444	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	44.3225676151552	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTCTTGATGACTGTGT	NA	False	NA	-2	True	AATAAA	-18	NA	49079898	49074639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49074913_49075135_49075282_49075363_49075466_49075544_49075754_49075865_49075979_49076429_49076525_49076644_49076751_49077642_49077748_49077836_49077912_49078040_49078113_49079750
transcript_14622.known	chr1	+	1415	4	FSM	ENSG00000143756.12	ENST00000523990.1	1415	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	67.7757741051739	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCATCTTTTTGTTATAAG	224109328	True	NA	NA	False	TTTAAA	-30	NA	224114118	224158182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224114397_224130471_224130582_224153141_224153338_224157351
transcript_146221.known	chrX	-	1658	11	FSM	ENSG00000068394.11	ENST00000156109.7	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	6.64906008395172	430	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTAATAGAAAGATGAAATC	NA	False	NA	-22	True	AATAAA	-15	NA	49123735	49113406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49113756_49113852_49113939_49115725_49115796_49115890_49116015_49116220_49116324_49117029_49117163_49117596_49117811_49119704_49119815_49122397_49122523_49122621_49122777_49123546
transcript_14623.known	chr1	+	628	3	FSM	ENSG00000143756.12	ENST00000483773.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCATTTGTATGATCTTT	224109380	True	NA	NA	False	TATAAA	-4	NA	224114170	224134365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224114397_224130471_224130582_224134073
transcript_146235.known	chrX	-	2795	9	FSM	ENSG00000012211.13	ENST00000599218.6	2795	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	6.59545297913646	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTGGGAGTTGGTCT	NA	False	NA	-11	True	AATAAA	-18	NA	49186373	49174801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49176266_49176902_49177203_49177992_49178180_49178271_49178476_49179250_49179389_49179692_49179807_49183733_49183918_49184624_49184711_49186255
transcript_146238.known	chrX	+	1103	5	FSM	ENSG00000102007.11	ENST00000376327.6	1103	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	9.63068014212911	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGAGGCCCGGTGCGGTGG	49170484	True	NA	NA	False	ATTAAA	-19	NA	49171897	49175235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49172097_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_146241.nnic	chrX	+	1034	5	NNC	ENSG00000102007.11	novel	1103	5	NA	NA	-3	-146	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	30.364452901378	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGATAATGAATAAAGTAATC	49170481	True	NA	-18	True	AATAAA	-16	NA	49171894	49175089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_49172171_49173128_49173282_49173387_49173484_49174334_49174426_49174671
transcript_146245.known	chrX	-	2421	7	FSM	ENSG00000102003.12	ENST00000263233.9	2421	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	4.7169905660283	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTACCCGGCTCTGATTTC	NA	False	NA	-11	True	AATAAA	-16	NA	49200193	49187814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49194165_49194362_49197714_49197840_49198967_49199034_49200150
transcript_146246.known	chrX	-	761	5	FSM	ENSG00000102003.12	ENST00000472598.5	761	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	11.9451873154003	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTTATCTGTCTGAGCC	NA	False	NA	NA	False	TATAAA	-3	NA	49200176	49189136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49189283_49191432_49191764_49193271_49193464_49198967_49199034_49200150
transcript_146248.nnic	chrX	-	640	4	NNC	ENSG00000102003.12	novel	574	3	NA	NA	-44	77	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	9.7410927974683	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCAGACTGAGAGAAACTC	NA	False	NA	NA	False	AATAAA	-17	NA	49200262	49196939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_49197277_49197714_49197840_49198967_49199034_49200150
transcript_146250.known	chrX	-	574	3	FSM	ENSG00000102003.12	ENST00000472737.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCATTCTATACACATTT	NA	False	NA	NA	False	NA	NA	NA	49200195	49197376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49197840_49198967_49199034_49200150
transcript_146252.nic	chrX	-	1398	9	ISM	ENSG00000102001.13	ENST00000376251.5	5813	48	23256	0	-341	0	3prime_fragment	TRUE	canonical	2	6	junction_2	2.42061459137964	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGATTTTGTTGTCTT	NA	False	NA	NA	False	AATAAA	-45	NA	49210053	49205062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_49205368_49205615_49205814_49206510_49206624_49206727_49206856_49207004_49207113_49208514_49208685_49209261_49209394_49209628_49209760_49209940
transcript_146258.nnic	chrX	+	958	5	NIC	ENSG00000049769.14	novel	2903	6	NA	NA	112	3	combination_of_known_splicesites	FALSE	canonical	3	27	junction_2	12.0701077045733	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTCTTGCGCATCTTTTG	49270298	False	NA	12	True	AATAAA	-21	NA	49270325	49301464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_49270874_49281405_49281462_49281983_49282064_49299275_49299436_49301350
transcript_146259.known	chrX	+	2310	17	FSM	ENSG00000101997.13	ENST00000376227.4	2310	17	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_5	9.11643433585741	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTAAGCTGAGGCATGGAT	49234753	True	NA	17	True	AATAAA	-18	NA	49235469	49250520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49235687_49237085_49237264_49242015_49242149_49242885_49242993_49243117_49243185_49243283_49243463_49246730_49246926_49247495_49247559_49247648_49247769_49248190_49248311_49248406_49248524_49248632_49248735_49248816_49248925_49249166_49249263_49249508_49249569_49249650_49249726_49250147
transcript_146261.nnic	chrX	+	762	4	NNC	ENSG00000215274.6	novel	558	5	NA	NA	4608	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGCATCTTTTGTGA	NA	False	NA	NA	False	AATAAA	-24	NA	49308253	49319844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_49308483_49313693_49313992_49317170_49317289_49319727
transcript_146262.known	chrX	+	527	5	FSM	ENSG00000215269.6	ENST00000445148.2	561	5	34	0	34	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTGCGCATCTTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	49570433	49577754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49570508_49571546_49571639_49572103_49572225_49575047_49575174_49577640
transcript_146265.known	chrX	+	487	5	FSM	ENSG00000101951.17	ENST00000376141.5	487	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	4.26468052730799	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTCTTTTGTAAAATT	49829154	True	NA	11	True	AATAAA	-26	NA	49829259	49833973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49829297_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_146266.nnic	chrX	+	476	5	NNC	ENSG00000101951.17	novel	487	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.67340285895511	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCATGCGTGTCTTTTGT	49829137	True	NA	5	True	AATAAA	-20	NA	49829242	49833967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_49829297_49830420_49830507_49830996_49831085_49832524_49832651_49833845
transcript_146267.known	chrX	+	790	5	FSM	ENSG00000101951.17	ENST00000218068.7	790	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	4.43705983732471	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTAGAAGTGATGATGA	49829197	True	NA	NA	False	NA	NA	NA	49829302	49834264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_49829352_49830398_49830507_49830996_49831085_49832524_49832651_49833845
transcript_146268.known	chrX	-	2175	2	FSM	ENSG00000234390.4	ENST00000437322.2	2175	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCGGTGAAACCTAAA	NA	False	NA	NA	False	AATAAA	-23	NA	49879241	49876723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_49878748_49879090
transcript_146274.known	chrX	+	1925	2	FSM	ENSG00000122824.11	ENST00000356450.3	1925	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGAGTTATTCTTATT	51330426	True	NA	NA	False	AATAAA	-15	NA	51332821	51337525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51333460_51336238
transcript_146275.nnic	chrX	+	509	2	NNC	ENSG00000226530.3	novel	406	2	NA	NA	60023	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAGCCCTTCGATCAAT	NA	False	NA	NA	False	AATAAA	-15	NA	51456553	51465662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_51456807_51465406
transcript_146277.known	chrX	-	2381	2	FSM	ENSG00000196368.5	ENST00000375992.4	2381	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	897	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCAGAGTTTACTTGTA	NA	False	NA	-13	True	AATAAA	-15	NA	51496592	51490010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_51491750_51495950
transcript_146278.known	chrX	-	1893	1	FSM	ENSG00000224109.4	ENST00000417339.4	1893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCTGGATACTCTTTCCA	NA	False	NA	4	True	AATAAA	-31	NA	51618912	51617019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_51617000_51618900
transcript_146279.known	chrX	-	1620	1	FSM	ENSG00000283093.1	ENST00000634648.1	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51682831	51681211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_51681200_51682800
transcript_146280.known	chrX	+	1620	1	FSM	ENSG00000223591.5	ENST00000602548.2	1620	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGTGTTGGTGTGTCT	NA	False	NA	NA	False	AGTAAA	-15	NA	51710511	51712131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51710500_51712100
transcript_146284.known	chrX	+	2791	1	FSM	ENSG00000189369.9	ENST00000340438.6	2791	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAGGCTCAGGCCGTCTT	51742223	True	NA	20	True	AATAAA	-36	NA	51743441	51746232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51743400_51746200
transcript_146290.known	chrX	+	2701	13	FSM	ENSG00000179222.18	ENST00000375772.7	2701	13	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	237.329397790403	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51801229	True	NA	13	True	AATAAA	-21	NA	51803006	51902354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51803118_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_146291.known	chrX	+	2723	13	FSM	ENSG00000179222.18	ENST00000326587.12	2723	13	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_1	121.828060761423	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGATGTGCTCTCTGCTTC	51884992	True	NA	13	True	AATAAA	-21	NA	51893622	51902354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_51893756_51894268_51894350_51895052_51895761_51896408_51897078_51897207_51897272_51897546_51897627_51897794_51897887_51898113_51898194_51898284_51898328_51898580_51898644_51900181_51900297_51901552_51901939_51902145
transcript_146303.known	chrX	-	2482	13	FSM	ENSG00000187243.17	ENST00000497164.5	2482	13	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_12	258.090531058817	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069182	52061826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068174_52069129
transcript_146304.known	chrX	-	2578	13	FSM	ENSG00000187243.17	ENST00000335504.10	2513	13	-65	0	-29	0	multi-exon	FALSE	canonical	3	671	junction_12	171.506478659619	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52069248	52061826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52062039_52062233_52062665_52062986_52063102_52064046_52064110_52064500_52064544_52064628_52064709_52065329_52065422_52065809_52065890_52066082_52066147_52066249_52066454_52066864_52067699_52067962_52068204_52069129
transcript_14631.known	chr1	+	2032	3	FSM	ENSG00000143753.13	ENST00000323699.9	2032	3	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	7	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTTCAGGTGTGTTG	224181336	True	NA	19	True	AATAAA	-28	NA	224183239	224193441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224183419_224189576_224190320_224192331
transcript_146313.known	chrX	+	2537	13	FSM	ENSG00000154545.17	ENST00000471932.6	2537	13	0	0	0	0	multi-exon	FALSE	canonical	3	659	junction_1	177.320390348469	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184887	52192268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52184966_52185891_52186133_52186396_52187231_52187641_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191862_52192056
transcript_146319.known	chrX	+	2996	12	FSM	ENSG00000154545.17	ENST00000477634.5	2996	12	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	414.642412903591	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTTTCTTCCTTTA	NA	False	NA	NA	False	ATTAAA	-14	NA	52184911	52192268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52184966_52185831_52186133_52186396_52187846_52187948_52188013_52188205_52188286_52188673_52188766_52189386_52189467_52189551_52189595_52189985_52190049_52190993_52191109_52191430_52191874_52192056
transcript_146323.nnic	chrX	-	757	3	NNC	ENSG00000287215.1	novel	3144	4	NA	NA	-5833	-1655	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGGGTACCACTCAGTAAA	NA	False	NA	NA	False	AATATA	-27	NA	52222563	52198396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_52198540_52199071_52199215_52222092
transcript_146325.known	chrX	+	627	5	FSM	ENSG00000155622.7	ENST00000286049.3	627	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTCTTGCACATCTTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	52369020	52375680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52369215_52370006_52370096_52370566_52370673_52372543_52372670_52375568
transcript_146326.known	chrX	-	1292	8	FSM	ENSG00000241476.9	ENST00000337502.6	1281	8	-11	0	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	0.349927106111883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGCTCGTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	52707189	52696895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52697519_52697983_52698089_52700442_52700579_52702580_52702631_52704496_52704593_52705127_52705243_52705680_52705770_52707111
transcript_146327.known	chrX	+	1281	8	FSM	ENSG00000268447.6	ENST00000596480.6	1281	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTTGTTTGCTCGTGCC	NA	False	NA	NA	False	AATAAA	-16	NA	52751251	52761536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52751319_52752660_52752750_52753187_52753303_52753837_52753934_52755799_52755850_52757853_52757990_52760343_52760449_52760913
transcript_146328.nnic	chrX	+	1861	5	NNC	ENSG00000179304.18	novel	2942	4	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	50.5290757881044	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52897318	52908560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_52897410_52898575_52898727_52899467_52899542_52900567_52900661_52907108
transcript_146329.known	chrX	+	2942	4	FSM	ENSG00000179304.18	ENST00000593751.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	20.8326666559997	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52897399	52908556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52898727_52899467_52899542_52900567_52900661_52907108
transcript_146331.known	chrX	+	3746	3	FSM	ENSG00000179304.18	ENST00000416841.8	3757	3	11	0	11	0	multi-exon	FALSE	canonical	3	121	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52897340	52908560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_52899542_52900567_52900661_52907108
transcript_146333.known	chrX	-	2942	4	FSM	ENSG00000268350.8	ENST00000596733.7	2942	4	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	22.1058061754523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGGGTGTAGAATTCAG	NA	False	NA	NA	False	AATAAA	-16	NA	52958414	52947257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087
transcript_146334.known	chrX	-	1733	4	FSM	ENSG00000268350.8	ENST00000619518.5	1733	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	53.1099488482776	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958404
transcript_146336.known	chrX	-	1799	5	FSM	ENSG00000268350.8	ENST00000612083.5	1799	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.7367132701721	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52995443	52947253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52957087_52957239_52995414
transcript_146337.known	chrX	-	1869	4	FSM	ENSG00000268350.8	ENST00000619373.5	1869	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	58.7593964116946	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958873	52947253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272_52956347_52958623
transcript_146338.known	chrX	-	1685	3	FSM	ENSG00000268350.8	ENST00000611661.4	1685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52995464	52947253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52956272_52956347_52995305
transcript_146339.known	chrX	-	3791	3	FSM	ENSG00000268350.8	ENST00000622447.5	3791	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	3.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGTGTAGAATTCAGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	52958518	52947253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_52948706_52955153_52955247_52956272
transcript_14635.nic	chr1	+	782	2	ISM	ENSG00000143753.13	ENST00000391877.3	1345	4	-77	3029	-51	76	5prime_fragment	FALSE	canonical	3	220	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGCATCTTTACTT	224181285	True	NA	5	True	ATTAAA	-14	NA	224183188	224190128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_224183419_224189576
transcript_146355.known	chrX	-	673	4	FSM	ENSG00000124313.18	ENST00000498281.2	673	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTATATTCCACC	NA	False	NA	-2	True	AATAAA	-18	NA	53281535	53266323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53266765_53266968_53267065_53279563_53279660_53281495
transcript_146356.nic	chrX	-	702	3	NIC	ENSG00000124313.18	novel	673	4	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGATGTATATTCCACC	NA	False	NA	-2	True	AATAAA	-18	NA	53281660	53266323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_53266765_53266968_53267065_53281495
transcript_146357.known	chrX	-	922	3	FSM	ENSG00000124313.18	ENST00000639161.2	922	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTCTGATGTATATTC	NA	False	NA	-6	True	AATAAA	-14	NA	53281584	53266327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53267065_53279563_53279660_53281495
transcript_146359.known	chrX	-	835	2	FSM	ENSG00000124313.18	ENST00000485377.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTGTCTGATGTATATT	NA	False	NA	-7	True	AATAAA	-13	NA	53281594	53266328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53267065_53281495
transcript_146360.known	chrX	-	1077	2	FSM	ENSG00000124313.18	ENST00000675731.1	1077	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATCTCTTCTCTCTGTCT	NA	False	NA	-17	True	AATAAA	-3	NA	53282026	53266338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53266885_53281495
transcript_146365.nnic	chrX	+	1250	7	NNC	ENSG00000158423.17	novel	1488	8	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	5.61001089323561	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	53422796	True	NA	9	True	AATAAA	-20	NA	53422899	53431115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_53423139_53423313_53423403_53426276_53426394_53428002_53428085_53429853_53429973_53430395_53430791_53430906
transcript_146371.known	chrX	+	1488	8	FSM	ENSG00000158423.17	ENST00000375327.6	1488	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	4.62027475108464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCACATGTTGTAACAGGA	53422769	True	NA	9	True	AATAAA	-20	NA	53422872	53431115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53428282_53428628_53429853_53429973_53430395_53430791_53430906
transcript_146372.known	chrX	+	1281	6	FSM	ENSG00000158423.17	ENST00000414955.6	1281	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.2687759489278	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTGTAACAGGACACAA	53422752	True	NA	14	True	AATAAA	-25	NA	53422855	53431120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_53423005_53423313_53423403_53426276_53426394_53428002_53428085_53429853_53429973_53430395
transcript_146376.known	chrX	-	954	6	FSM	ENSG00000072506.14	ENST00000168216.11	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_5	73.6977611600244	3097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	53434370	53431260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431797_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_146377.known	chrX	-	1154	5	FSM	ENSG00000072506.14	ENST00000684692.1	1154	5	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_4	82.3771813064759	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGTAGGCAGTGTTGTGT	NA	False	NA	-6	True	AATAAA	-17	NA	53434367	53431260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_146378.known	chrX	-	823	5	FSM	ENSG00000072506.14	ENST00000375298.4	823	5	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_1	325.657795853255	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTAGGCAGTGTTGT	NA	False	NA	-8	True	AATAAA	-15	NA	53434350	53431262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_146379.known	chrX	-	916	6	FSM	ENSG00000072506.14	ENST00000375304.9	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	277.55821011096	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGCAGTGTTGTGTGCT	NA	False	NA	-3	True	AATAAA	-20	NA	53434356	53431257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53431595_53431824_53431907_53431987_53432117_53432246_53432412_53433721_53433887_53434318
transcript_146380.known	chrX	-	14796	83	FSM	ENSG00000086758.16	ENST00000342160.7	14796	83	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_67	197.101869816266	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGCTTGCCTTGTGTGG	NA	False	NA	2	True	AATAAA	-27	NA	53684169	53532095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53533412_53534006_53534198_53534515_53534698_53535383_53535502_53536146_53536253_53536379_53536668_53537555_53537697_53538336_53538455_53538834_53539081_53539656_53539813_53542442_53542540_53543840_53543969_53544559_53544763_53545028_53545162_53546435_53546593_53546703_53546826_53547672_53548274_53548958_53549506_53550665_53550769_53550900_53551190_53551265_53551481_53552310_53552442_53552637_53552894_53554632_53554921_53557381_53557428_53558654_53558810_53558970_53559061_53559353_53559533_53560187_53560417_53561755_53561925_53562110_53562245_53562830_53562930_53563745_53563822_53564573_53564723_53565066_53565240_53568691_53568875_53569615_53569828_53573749_53573965_53575154_53575222_53575642_53575789_53576899_53577068_53580830_53581027_53583557_53583917_53584185_53584346_53585011_53585189_53586489_53586572_53586781_53586910_53588381_53588535_53589546_53589817_53590403_53590500_53590999_53591123_53592397_53592629_53593363_53593602_53594498_53594622_53595186_53595404_53600117_53600310_53602563_53602659_53603367_53603502_53604588_53604835_53607522_53607700_53608851_53608910_53614533_53614746_53615743_53615836_53616969_53617148_53617339_53617447_53624594_53624676_53625156_53625259_53627409_53627516_53627738_53627880_53628492_53628621_53628751_53628903_53629515_53629617_53630934_53631035_53631413_53631483_53631566_53631615_53632486_53632565_53634235_53634299_53645310_53645464_53647367_53647575_53648211_53648311_53654062_53654132_53680048_53680187_53683873
transcript_146383.known	chrX	+	423	1	FSM	ENSG00000235916.1	ENST00000455300.1	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTATCACATTACCACCA	NA	False	NA	NA	False	NA	NA	NA	53825886	53826309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_53825900_53826300
transcript_146385.known	chrX	-	6357	22	FSM	ENSG00000172943.21	ENST00000338154.11	6357	22	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.6273700844844	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGCTTGGCATTCTT	NA	False	NA	-4	True	GATAAA	-19	NA	54044473	53936679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_53939247_53940179_53940517_53944133_53944244_53962843_53962940_53984913_53985228_53985815_53985950_53987077_53987164_53987765_53987945_53992735_53992840_53993600_53993904_53995692_53995783_53999869_53999962_54002154_54002262_54002594_54002683_54011121_54011285_54014376_54014564_54016594_54016737_54017660_54017822_54022258_54022368_54022757_54022844_54042630_54042821_54043761
transcript_146386.known	chrX	-	1140	2	FSM	ENSG00000184083.12	ENST00000477084.1	1140	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTGTTGTGCTTGTTCTTT	NA	False	NA	0	True	AATAGA	-17	NA	54183281	54173788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_54174147_54182499
transcript_146392.nnic	chrX	-	970	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-60	88	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTTCTGTGTGATTC	NA	False	NA	-6	True	AATAAA	-17	NA	54358065	54333089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54333793_54357798
transcript_146393.nnic	chrX	-	951	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-49	88	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCCTTCTGTGTGATTC	NA	False	NA	-6	True	AATAAA	-17	NA	54358054	54333089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54333793_54357806
transcript_146396.nnic	chrX	-	763	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-57	-116	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	NA	False	NA	NA	False	AATGAA	-3	NA	54358062	54333293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54333793_54357798
transcript_146397.nnic	chrX	-	747	2	NNC	ENSG00000196632.11	novel	715	2	NA	NA	-49	-116	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATGGAAGAAGAAGCAG	NA	False	NA	NA	False	AATGAA	-3	NA	54358054	54333293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_54333793_54357806
transcript_146398.known	chrX	-	4343	18	FSM	ENSG00000102302.8	ENST00000375135.4	4343	18	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_15	21.3892900794722	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAGCACTGCTGTGC	NA	False	NA	2	True	AATACA	-23	NA	54496234	54445453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_54446415_54447310_54447455_54448805_54448968_54449142_54449269_54449658_54449761_54450270_54450302_54455447_54455528_54455691_54455785_54456219_54456367_54456508_54456568_54465450_54465590_54465695_54465853_54467783_54467933_54468786_54468877_54470015_54470458_54470582_54470761_54471313_54471488_54495125
transcript_146401.known	chrX	+	4076	5	FSM	ENSG00000158526.8	ENST00000375151.5	4076	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_1	30.7652401258303	1143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCAAAATGTGTGTTTGT	54426539	True	NA	NA	False	AATAAA	-25	NA	54440403	54448032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54440503_54440689_54440781_54443399_54443492_54444007_54444185_54444415
transcript_146402.known	chrX	+	2638	17	FSM	ENSG00000130119.17	ENST00000674498.1	2638	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_16	14.4826134986058	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAAAAATTGTGAGAAAAAT	54522072	True	NA	-33	True	NA	NA	NA	54530182	54621521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519_54560648_54620844
transcript_146406.known	chrX	+	2357	16	FSM	ENSG00000130119.17	ENST00000336470.8	2357	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	8.38941131559433	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	54522100	True	NA	NA	False	NA	NA	NA	54530210	54561071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_146407.known	chrX	+	2317	16	FSM	ENSG00000130119.17	ENST00000674311.1	2317	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5840374172492	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTAAGGCAGGAGAATCG	54522149	True	NA	NA	False	NA	NA	NA	54530259	54560967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54530420_54532523_54532586_54539039_54539102_54540134_54540243_54541272_54541390_54542954_54543039_54543206_54543343_54544222_54544327_54548228_54548374_54550962_54551051_54551567_54551743_54551831_54551975_54552291_54552429_54554564_54554693_54558435_54558656_54560519
transcript_146426.nnic	chrX	+	779	5	NNC	ENSG00000130119.17	novel	2575	9	NA	NA	5	1738	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	27.6676706645138	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACAGGATGGCCAGACC	54522077	True	NA	NA	False	NA	NA	NA	54530187	54562809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540171_54562309
transcript_146429.nnic	chrX	+	566	5	NNC	ENSG00000130119.17	novel	2575	9	NA	NA	5	-2004	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	27.6676706645138	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTGTTTTCATTTAT	54522077	True	NA	15	True	AGTAAA	-25	NA	54530187	54565285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_54530303_54532519_54532586_54539039_54539102_54540134_54540171_54564998
transcript_146436.nnic	chrX	+	677	5	NNC	ENSG00000130119.17	novel	895	9	NA	NA	-9	-2004	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	30.3345924647093	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTGTTTTCATTTAT	54522083	True	NA	15	True	AGTAAA	-25	NA	54530193	54565285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_54530420_54532519_54532586_54539039_54539102_54540134_54540171_54564998
transcript_14644.known	chr1	-	2897	23	FSM	ENSG00000143748.18	ENST00000281701.11	2897	23	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_9	36.7676701770446	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTGACTATACAGAAAAGT	-224325986	True	NA	-10	True	AATAAA	-43	NA	224330172	224227344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_146443.nnic	chrX	+	1327	2	Antisense	novelGene_ENSG00000102313.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTGATAATTTCGACAT	NA	False	NA	NA	False	AATAAA	-33	NA	54769866	54772536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_54770061_54771403
transcript_146445.nnic	chrX	+	1396	2	Antisense	novelGene_ENSG00000102313.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATATTGAAGTCTGGCTG	NA	False	NA	NA	False	AATAAA	-26	NA	54769906	54772560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_54770146_54771403
transcript_14645.known	chr1	-	3003	24	FSM	ENSG00000143748.18	ENST00000482491.5	3003	24	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	68.9591259994001	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAGAAAAGTTACAGAGA	-224326003	True	NA	-2	True	AATAAA	-26	NA	224330189	224227336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224227671_224231225_224231297_224233200_224233290_224236505_224236583_224250211_224250319_224268033_224268134_224275338_224275459_224281122_224281186_224286025_224286131_224287774_224287994_224289483_224289734_224294266_224294412_224296500_224296619_224300561_224300664_224301690_224301772_224303722_224303858_224304735_224304813_224305033_224305167_224307990_224308264_224311799_224311858_224317693_224317794_224317877_224317931_224326390_224326465_224330070
transcript_146472.known	chrX	+	2051	13	FSM	ENSG00000102316.17	ENST00000375068.6	2051	13	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	213.158196339401	1101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54800603	True	NA	25	True	ATTAAA	-19	NA	54807744	54816015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_146476.known	chrX	+	2048	13	FSM	ENSG00000102316.17	ENST00000375058.5	2048	13	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	258.923559612142	757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTGAGTTTATTGCTTT	54803409	True	NA	17	True	ATTAAA	-11	NA	54808370	54816007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_146484.nic	chrX	+	2171	13	NIC	ENSG00000102316.17	novel	2026	12	NA	NA	-14	0	intron_retention	FALSE	canonical	3	130	junction_1	372.76112212336	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTATTGCTTTTTTTGGCG	54804084	False	NA	25	True	ATTAAA	-19	NA	54809045	54816015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247_54815691_54815880
transcript_146486.known	chrX	+	2066	12	FSM	ENSG00000102316.17	ENST00000375053.6	2066	12	0	0	0	0	multi-exon	TRUE	canonical	3	757	junction_1	221.898867590658	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	NA	False	NA	29	True	NA	NA	NA	54807598	54815694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54807803_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_146494.known	chrX	+	1958	12	FSM	ENSG00000102316.17	ENST00000218439.8	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	570	junction_1	270.114484451952	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	54801196	False	NA	29	True	NA	NA	NA	54808337	54815694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54808434_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_146500.known	chrX	+	2026	12	FSM	ENSG00000102316.17	ENST00000396224.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	389.332783783906	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTGGTTTCAGTGGGG	54806994	True	NA	29	True	NA	NA	NA	54809059	54815694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54809224_54809302_54809377_54809721_54810214_54810820_54811130_54811249_54811314_54811573_54811654_54812156_54812252_54812944_54813025_54813117_54813161_54813487_54813551_54814660_54814776_54815247
transcript_146513.known	chrX	+	2597	14	FSM	ENSG00000067445.22	ENST00000445561.5	2597	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	83.5108326601863	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54930740_54931032_54931203
transcript_146518.known	chrX	+	1403	14	NNC	ENSG00000067445.22	novel	1404	13	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_11	126.513231059586	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGGAGTTTTTTCTGTCT	54916853	True	NA	NA	False	ATTAAA	-12	NA	54920815	54931429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928669_54928669_54928711_54930740_54931032_54931203
transcript_146520.known	chrX	+	2306	13	FSM	ENSG00000067445.22	ENST00000375022.8	2306	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	86.8144573213471	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922217_54922292_54922577_54923769_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_146528.known	chrX	+	1115	12	FSM	ENSG00000067445.22	ENST00000399736.5	1115	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	116.444148283293	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916853	True	NA	NA	False	ATTAAA	-14	NA	54920815	54931431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_54920879_54922217_54922292_54924450_54924556_54924669_54924734_54924988_54925069_54925591_54925684_54926409_54926490_54926582_54926626_54927042_54927106_54927666_54927782_54928602_54928711_54931203
transcript_146542.nnic	chrX	+	542	4	NIC	ENSG00000067445.22	novel	1115	12	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	160.748941589742	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGAGTTTTTTCTGTCTTT	54916825	True	NA	NA	False	ATTAAA	-14	NA	54920787	54931431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_54920879_54927666_54927782_54928602_54928711_54931203
transcript_146548.known	chrX	+	3239	6	FSM	ENSG00000169188.5	ENST00000374987.4	3239	6	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_4	9.26066952223218	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTTTGTGCTTTATTTT	54997884	True	NA	3	True	AATAAA	-14	NA	55000362	55009057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55000580_55001545_55001630_55002250_55002432_55002961_55003109_55003798_55003869_55006517
transcript_146549.known	chrX	+	728	5	FSM	ENSG00000169188.5	ENST00000471758.1	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	73.3974624901979	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGCCTGAGGTGAT	54997914	True	NA	NA	False	NA	NA	NA	55000392	55006757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55000580_55001545_55001630_55002961_55003109_55003798_55003869_55006517
transcript_146555.known	chrX	-	342	3	FSM	ENSG00000182518.14	ENST00000478918.1	342	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	106.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCCAGAGAGAGCAAGTGGA	NA	False	NA	NA	False	AATGAA	-23	NA	55160941	55146268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55146312_55159128_55159229_55160742
transcript_146557.known	chrX	-	712	3	FSM	ENSG00000182518.14	ENST00000489298.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	106	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTAAAGGGGCTGTGA	NA	False	NA	-52	True	NA	NA	NA	55161102	55145937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55146312_55159128_55159229_55160864
transcript_146558.known	chrX	-	1170	3	FSM	ENSG00000182518.14	ENST00000477847.6	1170	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	93	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTAGAGTGTGCACTTCA	NA	False	NA	NA	False	NA	NA	NA	55161119	55145386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55146312_55159128_55159229_55160974
transcript_146560.known	chrX	-	1067	4	FSM	ENSG00000182518.14	ENST00000332132.8	1067	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.346326825154	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGATCTGTGTCTCTCT	NA	False	NA	-4	True	AATAAA	-22	NA	55161195	55143101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55143876_55146180_55146312_55159125_55159229_55161136
transcript_146561.known	chrX	+	1440	1	FSM	ENSG00000187601.5	ENST00000342972.3	1440	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	299	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTGCGCATTTTCTGAC	55451181	True	NA	16	True	AATAAA	-17	NA	55452126	55453566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55452100_55453600
transcript_146562.known	chrX	-	4643	3	FSM	ENSG00000247746.5	ENST00000500968.4	4643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTTCAGTTATTTGCT	NA	False	NA	0	True	AATAAA	-18	NA	55489848	55484615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_55488989_55489168_55489366_55489775
transcript_146567.known	chrX	+	1573	11	FSM	ENSG00000083750.13	ENST00000262850.7	1573	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	19.6471371960395	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAATATTGTTTCACACA	55716999	False	NA	NA	False	NA	NA	NA	55717884	55758348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55727306_55727391_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_146569.nnic	chrX	+	2149	11	NNC	ENSG00000083750.13	novel	2051	10	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_7	15.7085963726872	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716873	True	NA	NA	False	AATAAA	-17	NA	55717758	55758774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55752245_55752354_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_146570.nnic	chrX	+	2212	11	NNC	ENSG00000083750.13	novel	2051	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_7	15.9025155242811	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716858	True	NA	NA	False	AATAAA	-17	NA	55717743	55758774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55752245_55752402_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_146574.known	chrX	+	2051	10	FSM	ENSG00000083750.13	ENST00000374941.9	2051	10	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_6	11.8883696667513	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTCTATTTTTCTT	55716863	True	NA	NA	False	AATAAA	-17	NA	55717748	55758774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363_55731587_55751100_55751197_55753391_55753515_55755840_55755933_55757215_55757332_55758245
transcript_146581.nic	chrX	+	1241	5	ISM	ENSG00000083750.13	ENST00000374941.9	2051	10	-24	27066	-24	0	5prime_fragment	FALSE	canonical	3	46	junction_3	4.94974746830583	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	55716839	True	NA	NA	False	AATAAA	-24	NA	55717724	55731708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363
transcript_146582.nic	chrX	+	2533	5	ISM	ENSG00000083750.13	ENST00000374941.9	2051	10	-107	25857	-107	1209	5prime_fragment	FALSE	canonical	3	46	junction_3	4.94974746830583	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTTTTATTCACTTGT	NA	False	NA	NA	False	AATAAA	-21	NA	55717641	55732917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55718420_55719313_55719348_55722185_55722286_55729293_55729361_55731363
transcript_146584.nic	chrX	+	2065	2	ISM	ENSG00000083750.13	ENST00000262850.7	1573	11	-143	37648	-7	-11008	5prime_fragment	FALSE	canonical	3	57	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAGCCGGACATGATGGT	55716856	True	NA	NA	False	AATATA	-16	NA	55717741	55720700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_55718420_55719313
transcript_146586.known	chrX	+	507	3	FSM	ENSG00000083750.13	ENST00000498762.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTGTCATTTACTTT	55721305	False	NA	NA	False	AATAAA	-24	NA	55722190	55731708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55722286_55729293_55729361_55731363
transcript_146595.nnic	chrX	+	1254	4	NNC	ENSG00000227486.3	novel	1156	3	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_1	1.4142135623731	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGGACTTCCTGAAGT	55907964	True	NA	21	True	AATAAA	-39	NA	55908216	56015193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_55908801_55989687_55989850_56002824_56002984_56014844
transcript_146601.known	chrX	+	7897	3	FSM	ENSG00000227486.3	ENST00000658575.1	7897	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAGAGAATAGAGCAAAAA	55907979	True	NA	NA	False	NA	NA	NA	55908231	56021946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_55985998_55986225_56014844
transcript_146603.known	chrX	+	1156	3	FSM	ENSG00000227486.3	ENST00000666613.1	1156	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGGACTTCCTGAAGT	NA	False	NA	21	True	AATAAA	-39	NA	55908152	56015193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_56002824_56002984_56014844
transcript_146605.known	chrX	+	956	3	FSM	ENSG00000227486.3	ENST00000669152.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	4	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	55907990	True	NA	NA	False	NA	NA	NA	55908242	56205253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_56014844_56014962_56204972
transcript_146607.known	chrX	+	4651	3	FSM	ENSG00000227486.3	ENST00000655874.1	4651	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCTGCTCTTTTTTTGGT	55908253	True	NA	NA	False	AATATA	-4	NA	55908282	56209271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908518_56014844_56014962_56204972
transcript_14661.known	chr1	+	912	5	FSM	ENSG00000143771.12	ENST00000366860.9	912	5	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1830.06589703759	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTAGATTTCTAGTTC	224338472	True	NA	41	True	TATAAA	-24	NA	224356886	224375998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224364108_224364456_224365878_224365992_224371282_224371424_224375794
transcript_146610.known	chrX	+	911	2	FSM	ENSG00000227486.3	ENST00000653318.2	926	2	0	15	0	5	multi-exon	FALSE	canonical	3	12	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTCCCCATTCAACATCA	55907971	True	NA	6	True	AATAAA	-24	NA	55908223	56015178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_55908801_56014844
transcript_146614.known	chrX	+	9096	6	FSM	ENSG00000102349.18	ENST00000468660.6	9096	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	3.31058907144937	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGCCATTTTCTTGACT	56231914	True	NA	9	True	AATAAA	-21	NA	56232355	56291531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56233342_56250230_56250305_56265179_56265745_56269377_56269490_56270181_56270322_56284312
transcript_146616.known	chrX	+	713	2	FSM	ENSG00000230105.1	ENST00000446028.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTCATGGACAGGAAGAA	56618178	True	NA	NA	False	AAGAAA	-15	NA	56618390	56624458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56618514_56623868
transcript_146617.known	chrX	-	2436	6	FSM	ENSG00000204271.13	ENST00000640577.1	2436	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.5591410854362	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCTATGAGTGAGAACATG	NA	False	NA	NA	False	NA	NA	NA	56995542	56973434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56974899_56977072_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_146619.known	chrX	-	1717	6	FSM	ENSG00000204271.13	ENST00000475785.7	1717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.2602665504934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTATAAGAGAT	NA	False	NA	-59	True	NA	NA	NA	56995527	56976438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_146620.known	chrX	-	2998	6	FSM	ENSG00000204271.13	ENST00000639956.1	2998	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	20.9284495364563	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995533	56975141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978422_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_146621.known	chrX	-	3121	6	FSM	ENSG00000204271.13	ENST00000638819.1	3121	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	22.6892044814268	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995553	56975141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978499_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_146625.known	chrX	-	856	6	FSM	ENSG00000204271.13	ENST00000638834.1	856	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.247696509976	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTATAGTCTCTGGTAA	NA	False	NA	NA	False	NA	NA	NA	56995381	56977088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978418_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_146628.known	chrX	-	1778	6	FSM	ENSG00000204271.13	ENST00000639053.1	1778	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	21.7678662252413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTAATGTTTTTAAATAA	NA	False	NA	-42	True	NA	NA	NA	56995555	56976421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978291_56978499_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_146629.known	chrX	-	2938	5	FSM	ENSG00000204271.13	ENST00000640131.1	2938	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	5.62916512459885	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGAGTTTGACTCTTTT	NA	False	NA	-2	True	AATAAA	-15	NA	56995555	56975119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995215
transcript_146630.known	chrX	-	1620	5	FSM	ENSG00000204271.13	ENST00000478405.1	1620	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	7.36121593216773	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGTCTCTAACAGTGTGA	NA	False	NA	-2	True	AATAAA	-20	NA	56995525	56976381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995241
transcript_146631.known	chrX	-	2543	5	FSM	ENSG00000204271.13	ENST00000640187.1	2543	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	14.5494845269515	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCCAGACATCGCATTTT	NA	False	NA	NA	False	NA	NA	NA	56995507	56975401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56977197_56978579_56978661_56984265_56984479_56994722_56994950_56995280
transcript_146637.known	chrX	-	4299	4	FSM	ENSG00000204271.13	ENST00000639888.1	4299	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATAAATCTTTTCAAATA	NA	False	NA	-24	True	NA	NA	NA	56995555	56975141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995215
transcript_146638.known	chrX	-	3719	4	FSM	ENSG00000204271.13	ENST00000639482.1	3719	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGTAAACCCAAAATAAAAT	NA	False	NA	NA	False	CATAAA	-12	NA	56995530	56975670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_56978661_56984265_56984479_56994722_56994950_56995241
transcript_146640.known	chrX	+	305	3	FSM	ENSG00000204272.13	ENST00000451583.1	305	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAAGATCGGGTTGTAAG	56723959	False	NA	NA	False	NA	NA	NA	56729372	56817376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729484_56732062_56732200_56817319
transcript_146641.known	chrX	+	543	2	FSM	ENSG00000204272.13	ENST00000423617.2	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTATAAGAACTCCTATG	56723940	False	NA	10	True	AGTAAA	-20	NA	56729353	56817626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729590_56817319
transcript_146643.known	chrX	+	896	4	FSM	ENSG00000204272.13	ENST00000637096.1	896	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	503.985008595384	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCGCTGTGTTAGATCTAT	56723827	True	NA	17	True	AATAAA	-11	NA	56729240	56817569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_56729590_56732062_56732200_56811019_56811180_56817319
transcript_146652.nnic	chrX	-	1125	3	NNC	ENSG00000186787.10	novel	725	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121558	57119681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57120102_57120404_57120632_57121080
transcript_146653.known	chrX	-	725	3	FSM	ENSG00000186787.10	ENST00000374910.3	725	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121315	57119681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57120102_57120404_57120632_57121237
transcript_146656.nic	chrX	-	912	3	NIC	ENSG00000186787.10	novel	1152	2	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	8.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121554	57119681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_57120102_57120404_57120635_57121292
transcript_146657.nnic	chrX	-	1428	2	NNC	ENSG00000186787.10	novel	1261	2	NA	NA	-10	0	intron_retention	FALSE	canonical	3	25	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121558	57119681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57120632_57121080
transcript_146658.known	chrX	-	1258	2	FSM	ENSG00000186787.10	ENST00000333933.3	1258	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCTGTGTGTAAGCCCT	NA	False	NA	-3	True	AATACA	-17	NA	57121546	57119682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57120632_57121237
transcript_146660.known	chrX	-	1152	2	FSM	ENSG00000186787.10	ENST00000275988.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTGTGTAAGCCCTT	NA	False	NA	-2	True	AATACA	-18	NA	57121491	57119681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57120635_57121292
transcript_146677.known	chrX	-	1319	2	FSM	ENSG00000147059.9	ENST00000374906.4	1091	2	-228	0	-102	0	multi-exon	FALSE	canonical	3	20	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGTCTGTAAGCCCTT	NA	False	NA	NA	False	AATACA	-18	NA	57137625	57135649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_57136603_57137259
transcript_146678.nnic	chrX	-	1123	2	NNC	ENSG00000147059.9	novel	1091	2	NA	NA	200	-3	intron_retention	FALSE	canonical	3	9	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACATGCTGTCTGTAAGCC	NA	False	NA	NA	False	AATACA	-15	NA	57137197	57135652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_57136603_57137024
transcript_146690.nnic	chrX	+	1174	7	NNC	ENSG00000165591.7	novel	383	4	NA	NA	58518	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	15.3161135192102	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	57345126	True	NA	4	True	AATAAA	-16	NA	57345223	57489193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_57345280_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_146698.nnic	chrX	+	747	4	NNC	ENSG00000165591.7	novel	1980	11	NA	NA	58518	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.9267594221045	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	57345126	True	NA	4	True	AATAAA	-16	NA	57345223	57489193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_57345280_57378650_57378787_57380911_57381030_57488756
transcript_146699.known	chrX	+	1980	11	FSM	ENSG00000165591.7	ENST00000374900.5	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	6.3718129288296	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTCTGTTTTGGGT	57286601	True	NA	4	True	AATAAA	-16	NA	57286705	57489193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_57287018_57292497_57292581_57310592_57310730_57331597_57331808_57341270_57341391_57378650_57378787_57380911_57381030_57431917_57432038_57446927_57447040_57448523_57448719_57488756
transcript_146707.known	chrX	-	653	5	FSM	ENSG00000235437.9	ENST00000671338.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	27.5136329843952	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACTAAAGTAAGAAATAA	NA	False	NA	NA	False	NA	NA	NA	63560942	63426891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63426997_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_146709.known	chrX	-	3088	5	FSM	ENSG00000235437.9	ENST00000662156.1	3088	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	29.2179311382582	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGTGTTGCCATTGAGCT	NA	False	NA	-22	True	NA	NA	NA	63561075	63426574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63428982_63432363_63432492_63509943_63510080_63516909_63517083_63560831
transcript_146711.known	chrX	-	3879	4	FSM	ENSG00000235437.9	ENST00000654880.1	3879	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	34.2960963117119	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGTTAAGAAGCCAATAC	NA	False	NA	NA	False	AATAAA	-39	NA	63561063	63396557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63432363_63432492_63516909_63517083_63560831
transcript_146713.nnic	chrX	-	826	4	NNC	ENSG00000235437.9	novel	980	4	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	21.0765799460496	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561028	63426557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_63426997_63432363_63432492_63443070_63443133_63560831
transcript_146715.nic	chrX	-	941	4	NIC	ENSG00000235437.9	novel	653	5	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	16.9967317119759	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561069	63426557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_63426997_63432363_63432492_63509943_63510080_63560831
transcript_146716.known	chrX	-	980	4	FSM	ENSG00000235437.9	ENST00000665831.1	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	18.6607133363712	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561071	63426557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63426997_63432363_63432492_63516909_63517083_63560831
transcript_146719.nnic	chrX	-	1065	4	NNC	ENSG00000235437.9	novel	2973	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	31.8573208052543	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561080	63426557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_63427073_63432363_63432492_63516909_63517083_63560831
transcript_146720.known	chrX	-	2973	4	FSM	ENSG00000235437.9	ENST00000609401.6	2973	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	16.739839372653	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTTCTGTTCCGTTCT	NA	False	NA	-6	True	AATAAA	-16	NA	63561080	63426558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63428982_63432363_63432492_63516909_63517083_63560831
transcript_146722.known	chrX	-	2491	3	FSM	ENSG00000235437.9	ENST00000662689.1	2491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTGAAATCAATGACTAAC	NA	False	NA	NA	False	NA	NA	NA	63560915	63397669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63516909_63517083_63560831
transcript_146723.known	chrX	-	667	2	FSM	ENSG00000235437.9	ENST00000608788.6	667	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTGTTTGGAAAGCTAAGT	NA	False	NA	NA	False	AATAAA	-33	NA	63561035	63399440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63560831
transcript_146724.known	chrX	-	816	3	FSM	ENSG00000235437.9	ENST00000669422.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	8.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTCTGTTCCGTTCTT	NA	False	NA	-5	True	AATAAA	-17	NA	63561080	63426557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63426997_63432363_63432492_63560831
transcript_146725.known	chrX	-	2814	3	FSM	ENSG00000235437.9	ENST00000609143.7	2816	3	0	2	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTGCTTCTGTTCCGTTC	NA	False	NA	-7	True	AATAAA	-15	NA	63561095	63426559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63428982_63432363_63432492_63560831
transcript_146726.known	chrX	-	1024	4	FSM	ENSG00000235437.9	ENST00000662779.1	1024	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	36.4264860903284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTAAGTCTTCCCTCTATT	NA	False	NA	NA	False	AATAAA	-45	NA	63561071	63399428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63399904_63509943_63510080_63516909_63517083_63560831
transcript_146727.known	chrX	-	4105	1	FSM	ENSG00000186767.7	ENST00000374884.3	4105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAATTATCTTTGTATT	NA	False	NA	-9	True	AATAAA	-20	NA	63351332	63347227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63347200_63351300
transcript_146733.known	chrX	-	1888	10	FSM	ENSG00000131089.17	ENST00000624210.3	1888	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	42.1973611017397	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAACAAAAGTGTTTTCT	NA	False	NA	NA	False	NA	NA	NA	63755078	63637839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63754920
transcript_146734.known	chrX	-	1761	10	FSM	ENSG00000131089.17	ENST00000635729.1	1761	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	44.6603091108486	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	NA	False	NA	89	True	NA	NA	NA	63755216	63637867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63755157
transcript_146735.known	chrX	-	4702	10	FSM	ENSG00000131089.17	ENST00000671741.2	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	13.3979913733181	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGGCATAGCTCTCGT	NA	False	NA	0	True	AATAAA	-16	NA	63785214	63634966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63724531_63724712_63785115
transcript_146737.known	chrX	-	2143	9	FSM	ENSG00000131089.17	ENST00000623517.3	2143	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	39.7775062063976	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTCATTGCTTTTCTTG	NA	False	NA	NA	False	NA	NA	NA	63785558	63637689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63655493_63655738_63665885_63666018_63674037_63674168_63678339_63678573_63697124_63697305_63706257_63706450_63785115
transcript_146746.nic	chrX	-	472	2	ISM	ENSG00000131089.17	ENST00000636926.1	5436	11	3	114994	0	-125	5prime_fragment	FALSE	canonical	3	10	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGACAGAGACAGGGAA	NA	False	NA	NA	False	NA	NA	NA	63755124	63754408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_63754677_63754920
transcript_146747.known	chrX	-	787	1	FSM	ENSG00000131089.17	ENST00000623951.1	787	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTGTCGTGTCTTGTCT	NA	False	NA	NA	False	NA	NA	NA	63755070	63754283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63754300_63755100
transcript_146748.known	chrX	-	530	4	FSM	ENSG00000131089.17	ENST00000466925.4	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	66.7199786837163	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATAGATGGACCTTTT	NA	False	NA	-25	True	AATAAA	-14	NA	63674138	63637981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_63638210_63643979_63644049_63665885_63666018_63674037
transcript_146749.known	chrX	-	8407	2	FSM	ENSG00000184675.11	ENST00000374869.8	8407	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAATGTGCATTCTTGTGGT	NA	False	NA	-2	True	AATAAA	-32	NA	64205708	64185116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64193385_64205569
transcript_146752.nic	chrX	-	1602	11	ISM	ENSG00000102043.16	ENST00000374852.4	2660	14	-26	63341	-26	0	5prime_fragment	FALSE	canonical	3	30	junction_3	10.0319489631876	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCACTCAATGTTTGC	NA	False	NA	-22	True	AATAAA	-16	NA	64395478	64331421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64359404_64359528_64395339
transcript_146755.nnic	chrX	-	1467	10	NIC	ENSG00000102043.16	novel	2660	14	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_9	14.8457085290125	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGCACTCAATGTTTGC	NA	False	NA	-22	True	AATAAA	-16	NA	64395466	64331421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_64331758_64336078_64336129_64337267_64337394_64343610_64343721_64345044_64345178_64348659_64348795_64349941_64350071_64354776_64354935_64356175_64356339_64395339
transcript_146764.known	chrX	-	606	5	FSM	ENSG00000126970.16	ENST00000488831.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGCCAAGAGTCGGTCCCG	NA	False	NA	-42	True	NA	NA	NA	65034669	64917839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_65034628
transcript_146766.known	chrX	-	841	5	FSM	ENSG00000126970.16	ENST00000476032.1	841	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATGCCCTCTTTGCAA	NA	False	NA	-60	True	NA	NA	NA	64976363	64917857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_64976324
transcript_146767.known	chrX	-	2363	5	FSM	ENSG00000126970.16	ENST00000337990.2	2363	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	61.912741015077	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTCTGGGTAGCTCTTG	NA	False	NA	-12	True	AATACA	-19	NA	65034713	64916381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64922244_65034628
transcript_146770.known	chrX	-	2724	5	FSM	ENSG00000126970.16	ENST00000374839.8	2724	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	20.3270140453535	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAAAATATTAGCACTT	NA	False	NA	NA	False	AATAAA	-35	NA	64976450	64915806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_64917897_64919041_64919205_64920080_64920254_64921816_64921989_64976324
transcript_146772.known	chrX	-	2470	14	FSM	ENSG00000001497.18	ENST00000374811.8	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_5	223.859687669115	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534787	65512581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_146776.known	chrX	-	2386	13	FSM	ENSG00000001497.18	ENST00000374807.9	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_5	75.867574687009	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGTGTTTGTGAGATG	NA	False	NA	-5	True	AATAAA	-13	NA	65534754	65512581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65512902_65514822_65514974_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_146780.known	chrX	-	1957	12	FSM	ENSG00000001497.18	ENST00000677969.1	1957	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	237.622034763106	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCCAGTTTGACTATGA	NA	False	NA	NA	False	NA	NA	NA	65534754	65499117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65499160_65517986_65518466_65523559_65523708_65524055_65524263_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_146784.known	chrX	-	2324	12	FSM	ENSG00000001497.18	ENST00000678823.1	2324	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	310.782536710104	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTAAACACAGAACTTGGC	NA	False	NA	NA	False	NA	NA	NA	65534798	65520494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_65521288_65523559_65523708_65524055_65524263_65524563_65524615_65524964_65525051_65528259_65528370_65529211_65529259_65529593_65529879_65531356_65531439_65532560_65532631_65533609_65533736_65534479
transcript_146788.known	chrX	+	3960	13	FSM	ENSG00000147065.17	ENST00000360270.7	3960	13	0	0	0	0	multi-exon	FALSE	canonical	3	966	junction_9	63.3052569345987	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGACTCAATCGTTCTTT	65656063	True	NA	16	True	AATAAA	-17	NA	65667653	65741931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_65667854_65716817_65716902_65727813_65727910_65729437_65729713_65731106_65731191_65731837_65731985_65733183_65733281_65735266_65735431_65736794_65736926_65737177_65737339_65738524_65738618_65738969_65739195_65739728
transcript_146789.known	chrX	+	4431	21	FSM	ENSG00000089472.18	ENST00000343002.7	4431	21	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_5	22.9112963404518	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAATTTGGTGATTTTT	66162402	True	NA	20	True	ATTAAA	-22	NA	66164246	66267389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_66164471_66170557_66170738_66172354_66172600_66173588_66173802_66188358_66188542_66189683_66189939_66192129_66192299_66193501_66193639_66195097_66195230_66197682_66197895_66198877_66199029_66200539_66200753_66203363_66203578_66207194_66207335_66208114_66208247_66255034_66255142_66256104_66256331_66258839_66258980_66260099_66260263_66263643_66263689_66266439
transcript_146792.known	chrX	-	3455	7	FSM	ENSG00000131080.15	ENST00000374719.8	3455	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	22.512342293852	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTTATTCCTCTACTT	NA	False	NA	-35	True	AATAAA	-19	NA	66639078	66595636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_66598094_66599473_66599861_66602632_66602798_66604420_66604507_66605047_66605227_66615933_66616031_66638994
transcript_146802.known	chrX	-	3296	9	FSM	ENSG00000079482.14	ENST00000679914.1	3296	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	2.29128784747792	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGGAAAGAAAGAAAG	NA	False	NA	NA	False	AAGAAA	-44	NA	68433522	68208047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68210283_68212107_68212213_68213861_68213973_68234486_68234589_68274737_68274810_68283055_68283118_68299000_68299097_68432866_68433025_68433167
transcript_146806.nnic	chrX	-	703	4	NNC	ENSG00000079482.14	novel	598	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAGTCGCATTCTTCCC	NA	False	NA	NA	False	AATAAA	-21	NA	68433807	68412858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_68413016_68432866_68433025_68433167_68433379_68433630
transcript_146808.known	chrX	-	2189	3	FSM	ENSG00000079482.14	ENST00000680804.1	2189	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGAATTCTTATATTTTG	NA	False	NA	NA	False	AATAAA	-37	NA	68433301	68411118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68413016_68432866_68433025_68433167
transcript_146809.known	chrX	-	1247	2	FSM	ENSG00000079482.14	ENST00000681349.1	1247	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATGATTGTGAAAAATAA	NA	False	NA	NA	False	NA	NA	NA	68433295	68431905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_68433025_68433167
transcript_146820.known	chrX	+	6010	7	FSM	ENSG00000181704.12	ENST00000462683.6	6010	7	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_6	22.0812892135702	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTTGTGTGTGCCTATTC	68496198	True	NA	18	True	ATTAAA	-26	NA	68499050	68537282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68499124_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_146832.known	chrX	+	734	7	FSM	ENSG00000181704.12	ENST00000374643.7	734	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	122.088424239702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGATTCTCACCTTTACT	68496196	True	NA	-61	True	NA	NA	NA	68499048	68531970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68499158_68511848_68511978_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_146840.known	chrX	+	6134	6	FSM	ENSG00000181704.12	ENST00000374622.3	6134	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	130.466240844136	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACACTGGAAAAAGAAT	68498587	False	NA	2	True	ATTAAA	-10	NA	68498781	68537266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68499124_68513326_68513406_68518769_68518813_68521371_68521498_68522759_68522918_68531880
transcript_146856.known	chrX	+	375	1	FSM	ENSG00000236735.3	ENST00000422565.1	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATCACTGATCATCAAAA	NA	False	NA	NA	False	NA	NA	NA	68600098	68600473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_68600100_68600500
transcript_146863.known	chrX	-	887	2	FSM	ENSG00000181191.12	ENST00000477231.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAGAGGGAGAGGCGAG	NA	False	NA	NA	False	NA	NA	NA	69165449	69162325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_69163135_69165371
transcript_146864.known	chrX	-	2755	2	FSM	ENSG00000181191.12	ENST00000361478.1	2755	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGGTATAATGGAATTTT	NA	False	NA	-33	True	ATTAAA	-18	NA	69165521	69160861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_69163467_69165371
transcript_146867.known	chrX	+	1682	7	FSM	ENSG00000089289.16	ENST00000356413.5	1682	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	118.053660115503	1915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133022	True	NA	27	True	AATAAA	-33	NA	70133446	70166324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70133541_70133722_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_146872.known	chrX	+	1862	6	FSM	ENSG00000089289.16	ENST00000342206.10	1862	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	11.1103555298649	1913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTATCAGCTGCTTTT	70133024	True	NA	27	True	AATAAA	-33	NA	70133448	70166324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70134136_70134522_70134817_70146632_70146829_70148760_70148841_70150209_70150323_70165832
transcript_146873.known	chrX	+	4388	31	FSM	ENSG00000090889.12	ENST00000374403.4	4388	31	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	24.3276020647786	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCTGAGGAAGCTATTAA	70285100	True	NA	24	True	AATAAA	-21	NA	70290103	70420886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150_70374255_70375203_70375349_70376099_70376211_70386617_70386702_70387183_70387298_70395670_70395827_70395948_70396050_70402565_70402696_70403863_70404035_70404714_70404823_70405827_70405906_70406258_70406355_70406892_70407076_70417887_70418005_70419660_70419784_70420061
transcript_146878.nic	chrX	+	1910	16	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-124	46692	-124	-46692	5prime_fragment	FALSE	canonical	3	163	junction_1	18.8639574026472	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAAGAATTGGTTC	NA	False	NA	NA	False	CATAAA	-34	NA	70289979	70374194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899_70302067_70302303_70302399_70329404_70329522_70330156_70330333_70333627_70333690_70341798_70341932_70343702_70343762_70343876_70343983_70352599_70352657_70353621_70353808_70374150
transcript_146883.nic	chrX	+	868	6	ISM	ENSG00000090889.12	ENST00000374403.4	4388	31	-124	118827	-124	4871	5prime_fragment	FALSE	canonical	3	163	junction_1	17.7426040929735	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGACAAGTAAGTTACAATT	NA	False	NA	NA	False	AAGAAA	-6	NA	70289979	70302059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_70290151_70290437_70290579_70290690_70290806_70296997_70297189_70299112_70299203_70301899
transcript_146891.known	chrX	-	784	8	FSM	ENSG00000120509.11	ENST00000374454.1	784	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	159.68489379438	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAGGAGGATGATGATA	NA	False	NA	NA	False	NA	NA	NA	70289945	70286891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289521_70289594_70289859
transcript_146905.known	chrX	-	991	7	FSM	ENSG00000120509.11	ENST00000239666.9	991	7	0	0	0	0	multi-exon	TRUE	canonical	3	329	junction_6	33.543090031911	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGTGACTTTTGAAT	NA	False	NA	NA	False	AGTAAA	-18	NA	70289927	70286594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70287117_70287275_70287337_70287731_70287831_70288116_70288174_70288429_70288514_70289254_70289355_70289859
transcript_146920.known	chrX	+	1993	16	FSM	ENSG00000130055.14	ENST00000374382.4	1993	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.2122948389505	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	70423052	True	NA	32	True	AGTAAA	-17	NA	70423313	70433381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70423383_70424975_70425090_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_146924.known	chrX	+	2171	15	FSM	ENSG00000130055.14	ENST00000536730.5	2171	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.5525087254426	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70423383_70425353_70425458_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_146926.known	chrX	+	2067	14	FSM	ENSG00000130055.14	ENST00000538649.5	2067	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	12.6892770274468	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTGTGTGCACGTGTTC	70423019	False	NA	41	True	AGTAAA	-26	NA	70423030	70433390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70423383_70425762_70425857_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_146927.nnic	chrX	+	1886	13	NIC	ENSG00000130055.14	novel	1993	16	NA	NA	78	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	12.9708540796493	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTCTCAGACTTGTGTG	70423015	True	NA	32	True	AGTAAA	-17	NA	70423108	70433381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_70423383_70426051_70426112_70426370_70426470_70426647_70426742_70426865_70427012_70427136_70427220_70427312_70427464_70429492_70429715_70429914_70430064_70432306_70432455_70432578_70432662_70432911_70432941_70433033
transcript_14693.known	chr1	+	808	5	FSM	ENSG00000143771.12	ENST00000366856.3	808	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	1577.84734686217	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338478	True	NA	NA	False	AATAAA	-24	NA	224356892	224379452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224371282_224371424_224379068
transcript_146931.known	chrX	+	5074	14	FSM	ENSG00000082458.12	ENST00000374355.7	5074	14	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	44.6251978597705	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGACCAGCTTTGTCTTA	70451801	True	NA	9	True	AATAAA	-21	NA	70452304	70505487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70452756_70453636_70453794_70454213_70454317_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_146935.known	chrX	+	4529	12	FSM	ENSG00000082458.12	ENST00000542398.1	4529	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	19.2534208616555	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAATGACCAGCTTTGTCT	70451026	True	NA	7	True	AATAAA	-19	NA	70455095	70505485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70455264_70479149_70479265_70492106_70492284_70492520_70492597_70493375_70493476_70497179_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_14694.known	chr1	+	702	4	FSM	ENSG00000143771.12	ENST00000366858.7	702	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	1752.47602614764	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGTGGTGTTCTATT	224338443	True	NA	NA	False	AATAAA	-24	NA	224356857	224379452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224356994_224360494_224360564_224365878_224365992_224379068
transcript_146943.known	chrX	-	432	2	FSM	ENSG00000231651.1	ENST00000424211.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCTCTGTAAAAGGTCA	NA	False	NA	NA	False	AATAAA	-18	NA	70455826	70452957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70453307_70455743
transcript_146944.known	chrX	-	395	2	FSM	ENSG00000231651.1	ENST00000431103.1	395	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGAAGCCCTCTGTAAAAG	NA	False	NA	NA	False	AATAAA	-14	NA	70455994	70452961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70453307_70455944
transcript_146945.known	chrX	+	794	7	FSM	ENSG00000082458.12	ENST00000461646.1	794	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	15.5955834203861	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCCCCTTTTTTAGATA	70497154	False	NA	-8	True	NA	NA	NA	70497164	70502371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70497222_70498519_70498571_70499175_70499278_70499876_70500050_70500470_70500581_70500897_70500990_70502162
transcript_14695.known	chr1	+	1525	4	FSM	ENSG00000143771.12	ENST00000468318.5	1525	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	1741.56066663081	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTAGTTTGTGGTTTAAT	224338473	True	NA	11	True	AATAAA	-19	NA	224356887	224376884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224357069_224365878_224365992_224371282_224371424_224375794
transcript_146953.known	chrX	-	2235	12	FSM	ENSG00000165349.12	ENST00000298085.4	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_11	78.9273125170053	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAAACTGTGTCCTGT	NA	False	NA	-32	True	ATTAAA	-10	NA	70931125	70925587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70929999_70930976
transcript_14696.known	chr1	+	2539	6	FSM	ENSG00000143786.8	ENST00000272133.4	2539	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6.35609943282828	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	224616137	True	NA	16	True	ATTAAA	-18	NA	224616316	224740554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224617256_224680957_224681027_224684795_224684844_224730461_224730575_224734562_224734707_224739328
transcript_146973.known	chrX	-	2239	12	FSM	ENSG00000165349.12	ENST00000374299.8	2239	12	0	0	0	0	multi-exon	TRUE	canonical	3	194	junction_11	83.7516004534385	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCCTGTTTTTTGCTT	NA	False	NA	-23	True	AATAAA	-1	NA	70931096	70925578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_70925944_70926069_70926179_70926526_70926694_70926874_70927042_70927281_70927385_70927483_70927624_70927797_70928021_70928144_70928258_70928455_70928634_70928843_70929003_70929627_70930023_70930976
transcript_146974.known	chrX	+	330	1	FSM	ENSG00000230629.2	ENST00000429775.2	330	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2911	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATGGTGAAAACCCT	NA	False	NA	-34	True	NA	NA	NA	70962963	70963293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_70963000_70963300
transcript_146975.known	chrX	-	720	4	FSM	ENSG00000147164.12	ENST00000276105.3	720	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.56846672960488	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCATGTGGGCACTCTGC	NA	False	NA	83	True	NA	NA	NA	71068403	71060869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71061119_71061842_71061968_71062853_71062950_71068153
transcript_146976.known	chrX	-	946	3	FSM	ENSG00000147164.12	ENST00000465030.1	946	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTTTCTTAACAGTTTCT	NA	False	NA	NA	False	NA	NA	NA	71068388	71060515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71061119_71062853_71062950_71068141
transcript_146977.nic	chrX	-	885	2	ISM	ENSG00000147164.12	ENST00000465030.1	946	3	-64	1860	-4	-1506	5prime_fragment	FALSE	canonical	3	17	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAAAGTGGTAAGT	NA	False	NA	NA	False	NA	NA	NA	71068452	71062375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_71062950_71068141
transcript_146979.known	chrX	+	3644	3	FSM	ENSG00000184481.17	ENST00000374259.8	3644	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	2	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71095804	True	NA	13	True	AATAAA	-30	NA	71095850	71103532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71096982_71100683_71101741_71102076
transcript_146980.nic	chrX	+	2721	3	NIC	ENSG00000184481.17	novel	306	2	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	37.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGGTTTCTGCTGCCTT	71098669	True	NA	13	True	AATAAA	-30	NA	71099245	71103532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_71099454_71100683_71101741_71102076
transcript_146981.nic	chrX	-	624	3	ISM	ENSG00000204165.6	ENST00000374251.6	834	6	1581	98	-711	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGTGTGAAATTACTG	NA	False	NA	NA	False	AATAAA	-40	NA	71105159	71103986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_71104113_71104297_71104405_71104768
transcript_146982.nnic	chrX	+	1247	2	Antisense	novelGene_ENSG00000285171.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTACCTTGCCGGGCACAG	71103760	False	NA	NA	False	AATAAA	-24	NA	71103775	71105275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_71104126_71104378
transcript_146984.known	chrX	-	277	2	FSM	ENSG00000204165.6	ENST00000466160.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGGTGTGAAATTACTG	NA	False	NA	NA	False	AATAAA	-40	NA	71104448	71103986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71104113_71104297
transcript_146986.known	chrX	+	2812	13	FSM	ENSG00000147140.17	ENST00000420903.6	2812	13	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	883.528563331272	1360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242181	True	NA	23	True	ATTAAA	-13	NA	71283589	71301160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71284983_71285098_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_146989.known	chrX	+	2768	13	FSM	ENSG00000147140.17	ENST00000678830.1	2768	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	928.393276790008	1375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTAATTTTCTGTGGTG	71242201	True	NA	23	True	ATTAAA	-13	NA	71283609	71301160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297587_71297678_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_14699.nnic	chr1	+	2598	5	NIC	ENSG00000143786.8	novel	2539	6	NA	NA	-107	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	8.8140512819021	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCACTTAACTGGCTC	224616168	False	NA	16	True	ATTAAA	-18	NA	224616209	224740554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_224617256_224680957_224681027_224730461_224730575_224734562_224734707_224739328
transcript_146992.known	chrX	+	2995	12	FSM	ENSG00000147140.17	ENST00000677612.1	2995	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	732.235533167476	1454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCAGTAGTGGTGAGCTG	71242245	True	NA	NA	False	NA	NA	NA	71283653	71301522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283726_71284401_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_146994.known	chrX	+	1710	12	FSM	ENSG00000147140.17	ENST00000450092.6	1710	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	730.018736315652	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTTGCAGTGTCTAGTTT	71242352	False	NA	NA	False	NA	NA	NA	71283760	71300076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283989_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_146997.known	chrX	+	3206	11	FSM	ENSG00000147140.17	ENST00000473525.2	3206	11	0	0	0	0	multi-exon	FALSE	canonical	3	2009	junction_2	234.072723742003	1393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242201	True	NA	21	True	ATTAAA	-11	NA	71283609	71301158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71298509_71298706_71298817_71299941
transcript_147.known	SIRV1	-	973	3	FSM	SIRV1A	SIRV106	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	92	8667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_7552_7809_10553
transcript_147007.known	chrX	-	1841	7	FSM	ENSG00000147130.14	ENST00000373981.5	1841	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_6	48.1678200553947	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCTCAGCCTCTCCTT	NA	False	NA	-3	True	AATAAA	-15	NA	71254575	71249203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251245_71251557_71251602_71252588_71253275_71254480
transcript_147022.known	chrX	+	397	3	FSM	ENSG00000147140.17	ENST00000472185.1	397	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1036	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAAAAATCTTGTGTTA	71242263	True	NA	NA	False	NA	NA	NA	71283671	71300855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284407_71300518
transcript_147023.known	chrX	+	987	3	FSM	ENSG00000147140.17	ENST00000678414.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	1025.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGATTAAATGATATAAATG	71242232	True	NA	NA	False	NA	NA	NA	71283640	71286213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71285364
transcript_147024.known	chrX	-	1867	7	FSM	ENSG00000147130.14	ENST00000373982.5	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	51.4317238892711	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCAGCCTCTCCTTCCC	NA	False	NA	0	True	AATAAA	-18	NA	71254140	71249200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71249680_71250025_71250204_71250431_71250727_71251177_71251251_71251557_71251602_71252588_71253275_71254028
transcript_147025.known	chrX	+	2606	11	FSM	ENSG00000147140.17	ENST00000373841.5	2606	11	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	626.602776885005	1868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGTGGTGTTTTTGAA	71242224	True	NA	31	True	ATTAAA	-21	NA	71283632	71301168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297376_71297462_71297835_71297939_71298468_71298509_71298706_71298817_71299941
transcript_147026.known	chrX	+	3596	10	FSM	ENSG00000147140.17	ENST00000678323.1	3596	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	787.133163628589	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTTAATTTTCTGTGG	71242201	True	NA	21	True	ATTAAA	-11	NA	71283609	71301158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71283722_71284396_71284454_71290628_71290792_71291778_71291973_71294226_71294529_71296564_71296661_71296850_71297048_71297360_71298509_71298706_71298817_71299941
transcript_147027.nnic	chrX	+	616	2	NNC	ENSG00000147133.17	novel	1145	6	NA	NA	-80	-10656	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGTAGATGTATATTAC	71366103	True	NA	NA	False	AATAAA	-18	NA	71366141	71367329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_71366495_71367066
transcript_147028.nnic	chrX	-	783	2	Antisense	novelGene_ENSG00000147133.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGCCCATGCCACCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	71502117	71494769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_71495321_71501885
transcript_147031.known	chrX	+	5435	22	FSM	ENSG00000147162.14	ENST00000373719.8	5435	22	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	57.5932645973826	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCTGATGTATTTTGTA	71528734	True	NA	6	True	AATAAA	-19	NA	71533103	71575892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71533337_71536177_71536359_71537828_71538073_71544566_71544636_71547906_71548024_71554512_71554593_71555189_71555386_71555953_71556095_71556679_71556781_71556951_71557106_71557194_71557297_71557492_71557673_71559266_71559426_71559587_71559678_71561774_71561901_71562846_71563018_71563129_71563247_71563328_71563500_71564600_71564754_71567499_71567753_71567992_71568117_71573619
transcript_147033.known	chrX	-	623	3	FSM	ENSG00000237265.7	ENST00000433410.1	623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGGTCTGTGGTCTGC	NA	False	NA	NA	False	AATAAA	-13	NA	71664271	71662997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71663169_71663274_71663317_71663861
transcript_147034.known	chrX	+	4113	3	FSM	ENSG00000281852.1	ENST00000627173.1	4113	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	71697195	71706455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_71697302_71700820_71701044_71702671
transcript_147035.known	chrX	-	886	4	FSM	ENSG00000234442.4	ENST00000439926.2	886	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGTGGTCTGCCCT	NA	False	NA	NA	False	AATAAA	-16	NA	71763075	71760763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_71760902_71761007_71761050_71761608_71761655_71762415
transcript_14704.nic	chr1	+	549	3	NIC	ENSG00000143786.8	novel	876	6	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCGTGCATGTTGTCCTT	224434661	False	NA	NA	False	ATTAAA	-15	NA	224434671	224521221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_224434863_224515740_224515877_224520999
transcript_147042.known	chrX	+	348	1	FSM	ENSG00000196933.5	ENST00000463445.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	72044544	72044892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72044500_72044900
transcript_147050.known	chrX	+	1239	4	FSM	ENSG00000102309.15	ENST00000373669.8	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	127.146459731375	3707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTATGTGATTCTTAACAGA	72171876	True	NA	NA	False	AATAAA	-15	NA	72181756	72198340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72181829_72186460_72186535_72196784_72196905_72197367
transcript_147060.known	chrX	+	1780	3	FSM	ENSG00000102309.15	ENST00000218432.10	1780	3	0	0	0	0	multi-exon	FALSE	canonical	3	1093	junction_1	118	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTATGTGATTCTTAAC	72171795	True	NA	NA	False	AATAAA	-12	NA	72181675	72198337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72181829_72186460_72186535_72196784
transcript_147062.nnic	chrX	+	782	3	NIC	ENSG00000102309.15	novel	1323	4	NA	NA	-8	191	combination_of_known_splicesites	FALSE	canonical	3	398	junction_1	494.5	2599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTTTTATACATTTTGTT	72181295	True	NA	NA	False	AATAAA	-19	NA	72181344	72197545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_72181829_72196784_72196905_72197367
transcript_147069.known	chrX	-	4218	2	FSM	ENSG00000186871.7	ENST00000334463.4	4218	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTCCATCCACTTTGT	NA	False	NA	-13	True	ATTAAA	-15	NA	72239027	72204664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72208699_72238843
transcript_147071.known	chrX	-	4344	3	FSM	ENSG00000186871.7	ENST00000373657.2	4344	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCACTTTGTTTCACTGA	NA	False	NA	-5	True	ATTAAA	-23	NA	72239027	72204656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72208699_72237830_72237949_72238843
transcript_14708.known	chr1	+	968	3	FSM	ENSG00000143786.8	ENST00000483512.5	968	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGACTTTGGTTGGAACTC	224434621	True	NA	NA	False	NA	NA	NA	224434911	224521555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224435188_224515740_224515877_224520999
transcript_147101.known	chrX	-	1474	7	FSM	ENSG00000198034.11	ENST00000316084.10	1474	7	0	0	0	0	multi-exon	FALSE	canonical	3	9294	junction_6	1390.4663985712	62883	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGGGTCATGTCAGGC	NA	False	NA	NA	False	CATAAA	-21	NA	72277248	72272041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72272773_72273231_72273390_72273800_72273973_72275052_72275151_72275543_72275725_72276156_72276235_72277192
transcript_147102.known	chrX	-	1752	12	FSM	ENSG00000285547.1	ENST00000648922.1	1752	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.4550214167413	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTTGGACCGAGCCAATG	NA	False	NA	NA	False	NA	NA	NA	72572843	72301810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72302245_72302809_72302935_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147106.known	chrX	-	1231	3	FSM	ENSG00000125931.11	ENST00000246139.9	1231	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACGGGCCAACTAGAGGT	NA	False	NA	-10	True	AATAAA	-43	NA	72306987	72301649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72302245_72302809_72302935_72306476
transcript_147109.known	chrX	-	886	3	FSM	ENSG00000125931.11	ENST00000373619.7	886	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGGCCAACTAGAGGTGTT	NA	False	NA	-7	True	AATAAA	-22	NA	72307187	72301646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72302245_72302809_72302935_72307024
transcript_147114.known	chrX	-	1710	10	FSM	ENSG00000147099.21	ENST00000373583.6	1710	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	62.5264388523411	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTGTCCCGTTGTCTT	NA	False	NA	-1	True	AATAAA	-16	NA	72572877	72329515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147115.known	chrX	-	1274	10	FSM	ENSG00000147099.21	ENST00000415409.6	1274	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.6819472390177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATGGAAAAGAATGTAAAG	NA	False	NA	NA	False	AATAAA	-10	NA	72572843	72385108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72385296_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147116.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000650636.1	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	87.8674427760362	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCGTATAATGACTT	NA	False	NA	-2	True	TATAAA	-17	NA	72572816	72562219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72562475_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147117.known	chrX	-	747	5	FSM	ENSG00000147099.21	ENST00000373556.8	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	69.4712170614565	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	72572856	72567581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72567797_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147118.known	chrX	-	836	4	FSM	ENSG00000147099.21	ENST00000373554.6	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_2	13.9283882771841	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTCTCTAAATTCCTTT	NA	False	NA	-1	True	AATAAA	-21	NA	72572853	72567581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147119.known	chrX	-	1865	12	FSM	ENSG00000147099.21	ENST00000648452.1	1865	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	71.3022897873948	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAAATCTTTGAAAACC	NA	False	NA	7	True	NA	NA	NA	72572865	72329537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72330657_72330769_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147120.known	chrX	-	1700	11	FSM	ENSG00000147099.21	ENST00000647980.1	1700	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	64.8894444420662	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTAGTGTTATATATCT	NA	False	NA	-23	True	NA	NA	NA	72572847	72329567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72330077_72351732_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491001_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147121.known	chrX	-	1941	11	FSM	ENSG00000147099.21	ENST00000649543.1	1941	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	74.3464861308186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCGAGACCCTGTCCCAA	NA	False	NA	NA	False	NA	NA	NA	72572816	72351143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72351839_72462003_72462099_72464558_72464732_72488932_72489042_72490928_72491007_72494195_72494382_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147122.known	chrX	-	2044	7	FSM	ENSG00000147099.21	ENST00000650126.1	2044	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	86.2369152715678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAATAAATGTTAGCTGT	NA	False	NA	-30	True	AATAAA	-3	NA	72572847	72473430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72474730_72488932_72489042_72495155_72495269_72567888_72568031_72568753_72568885_72572056_72572110_72572650
transcript_147127.known	chrX	+	1490	1	FSM	ENSG00000269911.1	ENST00000602508.1	1490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCATCGACTCATTT	NA	False	NA	NA	False	AATAAA	-19	NA	72777607	72779097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72777600_72779100
transcript_147128.known	chrX	+	1460	7	FSM	ENSG00000184911.15	ENST00000334036.10	1460	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATATACGGGTTGTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	72776889	72848803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_72777249_72845041_72845200_72845498_72845558_72845871_72846006_72846884_72846946_72847129_72847278_72848262
transcript_147132.nnic	chrX	-	800	5	NNC	ENSG00000269502.6	novel	1524	6	NA	NA	-9	-63715	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	2.06155281280883	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGTGGTATTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	72943846	72935835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_72936028_72936600_72936688_72937344_72937487_72937584_72937692_72943574
transcript_147136.known	chrX	-	1363	7	FSM	ENSG00000269502.6	ENST00000615063.2	1363	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGATATACGGGTTGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	72943837	72872024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_72872565_72873549_72873698_72873881_72873943_72874824_72874959_72875272_72875332_72875630_72875789_72943574
transcript_147139.nnic	chrX	-	890	3	Genic_Genomic	ENSG00000186288.5	novel	2237	1	NA	NA	363	-517	multi-exon	FALSE	canonical	0	0	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCTCCTGGTCACTGTAA	NA	False	NA	NA	False	AGTAAA	-23	NA	73079149	73077792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chrX_-_73078146_73078327_73078447_73078731
transcript_147143.known	chrX	+	1167	4	FSM	ENSG00000231963.1	ENST00000454388.1	1167	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTGTCCTGAGTCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	73080166	73084635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73080619_73080699_73080837_73081697_73081813_73084172
transcript_147144.known	chrX	-	2044	1	FSM	ENSG00000204118.2	ENST00000373518.1	2044	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTAGCCTTCTCATTGAG	NA	False	NA	-9	True	AATAAA	-17	NA	73128080	73126036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_73126000_73128100
transcript_147145.known	chrX	-	2553	1	FSM	ENSG00000186462.9	ENST00000373517.4	2553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTATTTCTTGTTAT	NA	False	NA	-8	True	AATAAA	-36	NA	73214851	73212298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_73212300_73214900
transcript_147146.known	chrX	+	1642	3	FSM	ENSG00000131264.4	ENST00000373514.3	1642	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.5	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACTTGTCTGGCATCAA	73446763	True	NA	NA	False	AATAAA	-22	NA	73447052	73455171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73447756_73453516_73453663_73454378
transcript_147147.known	chrX	+	967	7	FSM	ENSG00000204116.12	ENST00000498407.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.41396046829795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGAGAAGCCTAGGATTT	73562345	True	NA	NA	False	GATAAA	-8	NA	73563281	73686773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73563581_73577406_73577462_73584416_73584573_73679325_73679383_73679653_73679714_73680954_73681117_73686595
transcript_147148.known	chrX	+	4158	6	FSM	ENSG00000204116.12	ENST00000373502.10	6869	6	11	2700	8	1196	multi-exon	FALSE	canonical	3	12	junction_5	3.72021504754766	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTTTGAACAAATGTATGA	73562271	True	NA	NA	False	AATAAA	-17	NA	73563207	73684411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73563581_73577406_73577462_73584416_73584573_73679325_73679383_73679653_73679714_73680954
transcript_14715.known	chr1	-	3958	4	FSM	ENSG00000233384.3	ENST00000437416.3	3958	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	11.4406682011537	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTCTGAAGCCTGCCT	-224615988	True	NA	NA	False	AATAAA	-8	NA	224616220	224608129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_224611593_224615203_224615428_224615611_224615737_224616074
transcript_147150.known	chrX	+	6797	5	FSM	ENSG00000204116.12	ENST00000373504.10	6797	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.84219357067906	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTGAATTCTGTGTTTT	73562263	True	NA	NA	False	AATAAA	-18	NA	73563199	73687102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73563581_73577406_73577462_73584416_73584573_73679325_73679383_73680954
transcript_147155.known	chrX	-	1950	6	FSM	ENSG00000230590.12	ENST00000654870.2	3111	6	0	1161	0	-3	multi-exon	FALSE	canonical	1	4	junction_1	14.1081536708387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATCCCTGTCAACCACT	NA	False	NA	NA	False	AATAAA	-34	NA	74292607	74202656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74203954_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292426
transcript_147157.known	chrX	-	1477	6	FSM	ENSG00000230590.12	ENST00000671067.1	1477	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	16.4996969669143	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATGCCATTCTGTATAC	NA	False	NA	NA	False	NA	NA	NA	74292378	74247128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74247924_74274341_74274411_74280393_74280495_74280930_74281086_74281701_74281849_74292168
transcript_147158.known	chrX	-	1658	6	FSM	ENSG00000230590.12	ENST00000671343.1	1658	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	15.8568597143318	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATATGGACTTTTGTAAC	NA	False	NA	NA	False	TATAAA	-3	NA	74292583	74246911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74247924_74274341_74274411_74280376_74280495_74280930_74281086_74281701_74281849_74292426
transcript_14716.nnic	chr1	-	673	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-9	-513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.657891697365	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224615997	True	NA	-7	True	AATAAA	-19	NA	224616229	224611400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224611593_224615203_224615428_224615611_224615737_224616097
transcript_147161.known	chrX	-	2519	4	FSM	ENSG00000230590.12	ENST00000668224.1	2519	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	18.006171781426	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGGAGGCTGAGGCAGGA	NA	False	NA	NA	False	AATACA	-42	NA	74292373	74278482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292168
transcript_147162.known	chrX	-	2778	4	FSM	ENSG00000230590.12	ENST00000429124.6	2778	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.4406682011537	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTAAAGGTTCCCAATG	NA	False	NA	NA	False	ATTAAA	-19	NA	74292620	74278212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74292426
transcript_147163.known	chrX	-	2838	4	FSM	ENSG00000230590.12	ENST00000662864.1	2838	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	7.58653778449403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCATCATCTCAAAATCAC	NA	False	NA	NA	False	NA	NA	NA	74293574	74278181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74280495_74280930_74281086_74281701_74281849_74293351
transcript_147165.nnic	chrX	+	559	3	ISM	ENSG00000225470.8	ENST00000415215.1	475	4	-41	92	0	-92	intron_retention	FALSE	canonical	3	231	junction_2	172.5	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATTGTTTGTTTGAA	73937024	True	NA	20	True	CATAAA	-20	NA	73944325	73947338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_73944466_73944583_73944663_73946998
transcript_14717.nnic	chr1	-	796	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-232	-513	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	10.2740233382816	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224616441	False	NA	-7	True	AATAAA	-19	NA	224616452	224611400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224611593_224615203_224615428_224615611_224615737_224616197
transcript_147173.known	chrX	+	606	4	FSM	ENSG00000225470.8	ENST00000654374.1	606	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	42.4604391038163	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	73937039	True	NA	16	True	AATAAA	-28	NA	73944340	74004551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73994839_73994962_73998767_73998845_74004269
transcript_147175.known	chrX	+	882	3	FSM	ENSG00000225470.8	ENST00000666493.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	109	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTTTGAATAACATTT	73937016	True	NA	19	True	AATAAA	-16	NA	73944317	73947704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944415_73944583_73944663_73946998
transcript_147179.known	chrX	+	3758	4	FSM	ENSG00000225470.8	ENST00000660836.1	3758	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	193.634248577627	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGTCAAAAAAAAAAAAAAAA	73937022	True	NA	NA	False	NA	NA	NA	73944323	74007684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_74004269
transcript_147180.known	chrX	+	1492	4	FSM	ENSG00000225470.8	ENST00000662120.1	1492	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	237.578525030264	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTATAAAACTCGCTGA	73937015	True	NA	15	True	AGTAAA	-27	NA	73944316	74000496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73999354
transcript_147181.known	chrX	+	853	4	FSM	ENSG00000225470.8	ENST00000660087.1	853	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	236.6812202098	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTGTATATCTATATGT	73937039	True	NA	7	True	AATAAA	-19	NA	73944340	74004542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_74004269
transcript_147182.known	chrX	+	782	5	FSM	ENSG00000225470.8	ENST00000602294.6	782	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.776734917848	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTATGATGTTGTTCTGG	73937040	True	NA	-3	True	AATATA	-9	NA	73944341	74004673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994863_73994962_73998767_73998845_74004269
transcript_147183.known	chrX	+	1109	7	FSM	ENSG00000225470.8	ENST00000671021.1	1109	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	199.673692141287	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTTTTGAGATATCTG	73937040	True	NA	-6	True	AATAAA	-6	NA	73944341	74004529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73962730_73962802_73994839_73994962_73998767_73998845_74004269
transcript_147184.known	chrX	+	483	2	FSM	ENSG00000225470.8	ENST00000453317.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTCTTGAAGCATCT	73937044	True	NA	NA	False	NA	NA	NA	73944345	73944946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583
transcript_147185.known	chrX	+	633	5	FSM	ENSG00000225470.8	ENST00000602985.6	633	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	239.872231615083	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATATCTATATGTGAAATT	73937037	True	NA	13	True	AATAAA	-25	NA	73944338	74004548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73962730_73962802_73998767_73998845_74004269
transcript_147186.known	chrX	+	1525	6	FSM	ENSG00000225470.8	ENST00000659373.1	1525	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	217.364578531094	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGAAGATAGTTTAAGAG	73937040	True	NA	22	True	AAAAAG	-7	NA	73944341	73999950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73994839_73994962_73997040_73997167_73998767_73998845_73998953
transcript_147187.known	chrX	+	753	6	FSM	ENSG00000225470.8	ENST00000602920.6	753	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	216.152353676753	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCTATATGTGAAATTG	73937040	True	NA	14	True	AATAAA	-26	NA	73944341	74004549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73962730_73962802_73994839_73994962_73998767_73998845_74004269
transcript_147188.known	chrX	+	962	5	FSM	ENSG00000225470.8	ENST00000667573.1	962	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	217.850149185168	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTATATGTGAAATTGAA	73937016	True	NA	16	True	AATAAA	-28	NA	73944317	74004551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73998767_73998845_74004269
transcript_147189.known	chrX	+	1818	6	FSM	ENSG00000225470.8	ENST00000663027.1	1818	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	203.692906111136	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAATTTATACATTA	73937037	True	NA	62	True	AAAAAG	-40	NA	73944338	73999990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73946998_73947375_73994839_73994962_73998767_73998845_73998953
transcript_147190.known	chrX	+	1100	6	FSM	ENSG00000225470.8	ENST00000659622.1	1100	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	222.225651084658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAGACTTTTGAGACAT	73937049	True	NA	35	True	AAAAAG	-20	NA	73944350	73999963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_73944466_73944583_73944663_73984443_73984542_73994839_73994962_73998767_73998845_73999354
transcript_147191.known	chrX	-	761	1	FSM	ENSG00000213269.2	ENST00000393214.2	761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTTTGAGTAACAAGTA	NA	False	NA	NA	False	NA	NA	NA	74376885	74376124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74376100_74376900
transcript_147192.known	chrX	-	3478	5	FSM	ENSG00000131263.13	ENST00000349225.2	3478	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	37.9143772202578	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTTTGAGATTTGTCA	NA	False	NA	NA	False	NA	NA	NA	74614617	74590117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74612581_74612644_74614421
transcript_147195.known	chrX	-	10565	4	FSM	ENSG00000131263.13	ENST00000332687.11	10565	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	25.4863798048204	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATGTACCGAGCAAATG	NA	False	NA	NA	False	TATAAA	-15	NA	74614624	74582975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_74593062_74594305_74594390_74595808_74596001_74614421
transcript_147198.known	chrX	-	2361	17	FSM	ENSG00000131269.19	ENST00000645829.3	2361	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	79.4862163758598	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATACATTCCCATTTTCTA	NA	False	NA	-21	True	ATTAAA	-5	NA	75156282	75053292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114620_75114633_75114753_75114835_75156104
transcript_147200.known	chrX	-	4592	16	FSM	ENSG00000131269.19	ENST00000373394.8	4592	16	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_15	36.9407934703929	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114832_75156104
transcript_147201.known	chrX	-	2106	16	FSM	ENSG00000131269.19	ENST00000663420.1	2106	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_15	61.2000726215982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGGAGGAAAGAAAGAAAC	NA	False	NA	-106	True	AATATA	-6	NA	75156064	75053442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75155979
transcript_147202.known	chrX	-	4595	16	FSM	ENSG00000131269.19	ENST00000253577.9	4595	16	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_15	41.7846330073097	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGTTAAAGTCTCAATAG	NA	False	NA	-7	True	AATAAA	-20	NA	75156283	75051047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75098941_75099062_75112885_75112973_75114753_75114835_75156104
transcript_147208.known	chrX	-	2234	15	FSM	ENSG00000131269.19	ENST00000339447.8	2234	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.2795563642118	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTATAATCCTTCTT	NA	False	NA	-10	True	ATTAAA	-16	NA	75156279	75053281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75053586_75060222_75060331_75062327_75062432_75065069_75065242_75069006_75069137_75069290_75069455_75070364_75070523_75071508_75071684_75073688_75073777_75073867_75073957_75075361_75075631_75076521_75076655_75112885_75112973_75114753_75114832_75156104
transcript_14721.nnic	chr1	-	659	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-9	-513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.675435561221	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224615997	True	NA	-7	True	AATAAA	-19	NA	224616229	224611400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224611593_224615217_224615428_224615611_224615737_224616097
transcript_147213.known	chrX	+	1135	8	FSM	ENSG00000094841.14	ENST00000462237.5	1135	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	44.4393647890825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAAAATAATTATCTTATG	75273076	True	NA	NA	False	NA	NA	NA	75274115	75303519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274641_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_147218.nic	chrX	+	1768	8	NIC	ENSG00000094841.14	novel	1636	7	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	53.4186392601699	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75273614	False	NA	-22	True	NA	NA	NA	75274653	75304572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_75274759_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_14722.nnic	chr1	-	742	4	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-192	-513	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	10.4243305140746	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224616401	False	NA	-7	True	AATAAA	-19	NA	224616412	224611400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224611593_224615217_224615428_224615611_224615737_224616197
transcript_147223.known	chrX	+	730	8	FSM	ENSG00000094841.14	ENST00000526850.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	57.4477579889693	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCATGTTTTGATTTTCTA	75285413	True	NA	NA	False	AGTAAA	-24	NA	75285433	75303548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75285525_75293471_75293515_75294562_75294621_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_147226.known	chrX	+	2474	7	FSM	ENSG00000094841.14	ENST00000373383.9	2474	7	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_1	21.7670750344541	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCATGGCAAATGTTGCT	75273045	True	NA	NA	False	AATAAA	-32	NA	75274084	75304885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_147228.known	chrX	+	2234	7	FSM	ENSG00000094841.14	ENST00000373379.5	2234	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	48.8651773306468	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTAGCTGATTACTTGA	75273050	True	NA	6	True	ATTAAA	-15	NA	75274089	75304600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274641_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75301016_75303404
transcript_147230.known	chrX	+	1636	7	FSM	ENSG00000094841.14	ENST00000530743.1	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	44.6081706516742	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTGATATTAAAACATTT	75274717	False	NA	-22	True	NA	NA	NA	75274727	75304572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75274759_75293471_75293515_75296341_75296412_75297490_75297554_75299734_75299897_75300866_75300966_75303404
transcript_147236.known	chrX	-	6012	11	FSM	ENSG00000102383.14	ENST00000541184.1	6012	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	8.46167832052247	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAATTGTTGGTTTTTTTTC	NA	False	NA	NA	False	ATTAAA	-12	NA	75523502	75368430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75372946_75379119_75379199_75417086_75417191_75421863_75421991_75424651_75424785_75429077_75429199_75429947_75429981_75431450_75431521_75450801_75450923_75478890_75478986_75522888
transcript_147240.known	chrX	+	483	1	FSM	ENSG00000233254.1	ENST00000453468.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGTGTTAAAAAATAAATA	NA	False	NA	NA	False	NA	NA	NA	75384345	75384828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_75384300_75384800
transcript_147241.known	chrX	-	2268	1	FSM	ENSG00000186675.7	ENST00000373359.4	2268	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTGTGCATTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	75785254	75782986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_75783000_75785300
transcript_147252.known	chrX	+	1185	6	FSM	ENSG00000102390.11	ENST00000373358.8	1185	6	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	26.1640975384209	2937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTTTCCTGTAGTGAA	76162890	True	NA	137	True	NA	NA	NA	76173061	76178314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76176880_76176993_76177615
transcript_147253.known	chrX	+	977	5	FSM	ENSG00000102390.11	ENST00000373357.3	977	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	258.396013901144	1944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTATCTATATCTGTGACTG	76162868	True	NA	19	True	AATAAA	-16	NA	76173039	76178196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_76173169_76173584_76173651_76174889_76174950_76175472_76175614_76177615
transcript_147255.known	chrX	-	3071	10	FSM	ENSG00000085224.23	ENST00000624032.3	3071	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.3463201599583	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGCAAAAAGGGAACTGAAG	NA	False	NA	98	True	GATAAA	-6	NA	77786208	77682304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77683452_77683538_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_14726.nnic	chr1	-	449	3	NNC	ENSG00000233384.3	novel	3507	3	NA	NA	-9	-513	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGAAGTAAGGCATTC	-224615997	True	NA	-7	True	AATAAA	-19	NA	224616229	224611400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224611593_224615611_224615737_224616097
transcript_147262.nic	chrX	-	1146	9	ISM	ENSG00000085224.23	ENST00000624032.3	3071	10	-58	2070	-33	103	5prime_fragment	FALSE	canonical	3	31	junction_3	17.1755640373177	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGAAGAAGATAAAAGTTG	NA	False	NA	NA	False	NA	NA	NA	77786266	77684374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77717130_77717244_77785981
transcript_147265.known	chrX	-	1860	8	FSM	ENSG00000085224.23	ENST00000623321.3	1860	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	25.6093095317675	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAATTATATGTTAAACT	NA	False	NA	NA	False	ATTAAA	-25	NA	77786225	77683506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77684594_77684938_77685007_77688817_77688928_77693823_77693938_77696576_77696705_77697582_77697636_77698573_77698630_77785981
transcript_147269.nnic	chrX	-	3395	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895458	77826363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_147270.nnic	chrX	-	2858	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895458	77826363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77827497_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_147271.nnic	chrX	-	3335	11	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2907911159895	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895458	77826363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_147272.nnic	chrX	-	2314	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-10	-10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	54.2907911159895	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGAAAGAAAAGGACTCC	NA	False	NA	NA	False	NA	NA	NA	77895458	77827444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828034_77828550_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_147274.nnic	chrX	-	2251	11	NNC	ENSG00000102158.22	novel	3407	11	NA	NA	-10	-13	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	54.2907911159895	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTAAGAAAGAAAAGGAC	NA	False	NA	NA	False	NA	NA	NA	77895458	77827447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77828025_77828601_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_147279.known	chrX	-	4047	10	FSM	ENSG00000102158.22	ENST00000358075.11	4047	10	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	12.5619452767397	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895593	77826363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_77829236_77830804_77830896_77841245_77841321_77853900_77853965_77855500_77855591_77856732_77856874_77857356_77857498_77870807_77870926_77875427_77875598_77895308
transcript_147285.nnic	chrX	-	1801	3	NNC	ENSG00000102158.22	novel	4047	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	91	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGTTTTTGATTACCA	NA	False	NA	-16	True	AATAAA	-16	NA	77895431	77826363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_77827988_77875543_77875598_77895308
transcript_147289.known	chrX	+	605	4	FSM	ENSG00000131174.7	ENST00000373335.4	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	2828.84550459881	763	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTAGGTTTTGTTTCTTTG	77874842	True	NA	25	True	AATAAA	-19	NA	77899439	77905385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_77899594_77901743_77901868_77902642_77902768_77905183
transcript_147299.known	chrX	+	4812	11	FSM	ENSG00000102144.15	ENST00000373316.5	4812	11	0	0	0	0	multi-exon	FALSE	canonical	3	6118	junction_7	297.033331462986	10549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTGCTGTTCTGTAGTTG	78054768	True	NA	4	True	ATTAAA	-16	NA	78104247	78129295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78104406_78109866_78109918_78113743_78113900_78114015_78114161_78117311_78117416_78118050_78118171_78122834_78122950_78123194_78123375_78124873_78125052_78125326_78125426_78125789
transcript_147300.known	chrX	+	960	2	FSM	ENSG00000102144.15	ENST00000476531.1	960	2	0	0	0	0	multi-exon	FALSE	canonical	3	6969	junction_1	0	4897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGATTTTTTTTTTTTTC	78124586	True	NA	20	True	AATAAA	-15	NA	78124943	78126267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78125426_78125789
transcript_147302.known	chrX	-	2657	7	FSM	ENSG00000187325.5	ENST00000341864.6	2657	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	39.8138027433815	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTTTTCATTTTTTAG	NA	False	NA	-30	True	AATAAA	-13	NA	78139650	78129747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_78131774_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_147303.nnic	chrX	-	972	7	NNC	ENSG00000187325.5	novel	2657	7	NA	NA	0	-227	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	132.870132920165	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAACTCATTGCAGTATAA	NA	False	NA	NA	False	AATAAA	-18	NA	78139650	78131947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_78132289_78133337_78133449_78136914_78136991_78137748_78137884_78137961_78138099_78138842_78138925_78139560
transcript_147308.known	chrX	+	553	5	FSM	ENSG00000147145.14	ENST00000614823.5	4454	5	14	3887	3	-179	multi-exon	FALSE	canonical	2	7	junction_1	1.29903810567666	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAACCCCTGCAGCCAGC	78746919	True	NA	NA	False	NA	NA	NA	78747733	78754827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78748035_78750173_78750224_78750729_78750793_78751209_78751312_78754790
transcript_147310.known	chrX	+	672	4	FSM	ENSG00000147145.14	ENST00000514744.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.85861230093008	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTGTATTCATCTTGG	78746916	True	NA	NA	False	NA	NA	NA	78747730	78755006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78748035_78750173_78750224_78751209_78751312_78754790
transcript_147313.nnic	chrX	+	570	4	NNC	ENSG00000147145.14	novel	792	5	NA	NA	-29	-521	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	0.942809041582063	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	78746865	True	NA	NA	False	AAGAAA	-10	NA	78747679	78750773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_78748035_78748962_78749083_78750173_78750224_78750728
transcript_147314.nnic	chrX	+	569	4	NNC	ENSG00000147145.14	novel	792	5	NA	NA	-29	-521	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.94392028877595	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	78746865	True	NA	NA	False	AAGAAA	-10	NA	78747679	78750773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_78748035_78748962_78749083_78750173_78750224_78750729
transcript_147317.nnic	chrX	+	470	3	NNC	ENSG00000147145.14	novel	672	4	NA	NA	-49	-521	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	3.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	NA	False	NA	NA	False	AAGAAA	-10	NA	78747659	78750773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_78748035_78750173_78750224_78750728
transcript_147318.nic	chrX	+	526	3	ISM	ENSG00000147145.14	ENST00000614823.5	4454	5	-117	7941	-106	-521	5prime_fragment	TRUE	canonical	2	7	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	NA	False	NA	NA	False	AAGAAA	-10	NA	78747602	78750773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_78748035_78750173_78750224_78750729
transcript_14732.nnic	chr1	-	517	3	NNC	ENSG00000233384.3	novel	3958	4	NA	NA	-9	-4280	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.5	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGCTAGTTTTCC	-224615997	True	NA	NA	False	GATAAA	-21	NA	224616229	224615167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_224615428_224615611_224615737_224616097
transcript_147321.nic	chrX	+	1660	3	NIC	ENSG00000147145.14	novel	792	5	NA	NA	-29	-521	intron_retention	FALSE	canonical	2	2	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	78746865	True	NA	NA	False	AAGAAA	-10	NA	78747679	78750773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_78748035_78748962_78750224_78750729
transcript_147323.nic	chrX	+	949	2	ISM	ENSG00000147145.14	ENST00000514744.5	672	4	-45	4233	-23	-521	5prime_fragment	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAAAGACCCAATG	78746871	True	NA	NA	False	AAGAAA	-10	NA	78747685	78750773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_78748035_78750173
transcript_147330.known	chrX	+	2611	2	FSM	ENSG00000147145.14	ENST00000435339.3	2611	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACATAAACTAAACCAAACC	78746913	True	NA	NA	False	AATAAA	-13	NA	78747727	78757094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_78748035_78754790
transcript_147337.known	chrX	-	879	6	FSM	ENSG00000078596.11	ENST00000469541.5	879	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	147.166028688689	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGGAAAAAAAAAAACTACT	NA	False	NA	NA	False	TTTAAA	-3	NA	79366927	79360961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79366856
transcript_147344.known	chrX	-	1698	5	FSM	ENSG00000078596.11	ENST00000434584.2	1698	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	130.352167224024	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACCACTGTTTCTTTTAT	NA	False	NA	-8	True	AATAAA	-12	NA	79367552	79360387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79367104
transcript_147348.known	chrX	-	523	3	FSM	ENSG00000078596.11	ENST00000482194.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTATTTTGGAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	79367318	79362580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79362692_79362941_79363140_79367104
transcript_147349.known	chrX	-	1616	6	FSM	ENSG00000078596.11	ENST00000373298.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_5	21.7678662252413	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGTTTCTTTTATTTCA	NA	False	NA	-4	True	AATAAA	-16	NA	79367334	79360383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_79361178_79361328_79361480_79362580_79362692_79362941_79363140_79363422_79363555_79367104
transcript_147351.known	chrX	+	506	2	FSM	ENSG00000122145.15	ENST00000476373.1	506	2	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTCTCTCCTACAT	NA	False	NA	NA	False	NA	NA	NA	80014768	80022654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_80014888_80022267
transcript_147355.known	chrX	-	6813	6	FSM	ENSG00000278530.5	ENST00000614414.4	6813	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	2.75680975041804	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTTTTTCTTTAAAA	NA	False	NA	-3	True	AATAAA	-18	NA	80335364	80228488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_80234591_80288905_80289058_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_14736.known	chr1	+	1103	7	FSM	ENSG00000185842.16	ENST00000366850.7	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	57.2463002200919	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTTGTCAGAAACTTTAT	224925428	True	NA	10	True	AATAAA	-23	NA	224929660	224967923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224929836_224952669_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_147360.nnic	chrX	-	711	5	NIC	ENSG00000278530.5	novel	6813	6	NA	NA	-36	-5	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	3.08220700148449	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCCTCATACCTTGTCTA	NA	False	NA	NA	False	AATAAA	-16	NA	80335400	80234474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_80234591_80289663_80289772_80290877_80291025_80310078_80310234_80335215
transcript_147362.nnic	chrX	+	2058	3	Intergenic	novelGene_72	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACTTAGTTTATCTTTG	NA	False	NA	NA	False	AATAAA	-21	NA	80808973	80847131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_80809294_80841914_80842132_80845610
transcript_147366.known	chrX	-	2099	7	FSM	ENSG00000198157.11	ENST00000358130.7	2099	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	140.166171223857	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTGTGGCCTTTGGTA	NA	False	NA	NA	False	TATAAA	-14	NA	81201913	81113698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534_81121673_81201736
transcript_147368.known	chrX	-	572	5	FSM	ENSG00000198157.11	ENST00000373250.7	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	146.823874080478	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGAAAGAAGATGGAAAAAA	NA	False	NA	-7	True	GATAAA	-31	NA	81121638	81114984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81121534
transcript_14737.known	chr1	+	929	6	FSM	ENSG00000185842.16	ENST00000366848.5	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	62.4416527648012	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTCAGAAACTTTATT	224952648	True	NA	11	True	AATAAA	-24	NA	224952669	224967924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224952780_224954958_224955099_224960152_224960303_224964478_224964610_224967430_224967584_224967679
transcript_147372.known	chrX	-	742	4	FSM	ENSG00000198157.11	ENST00000447319.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	175.789647021661	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGGGAAAGATGTAAAAGT	NA	False	NA	17	True	GATAAA	-4	NA	81121688	81114834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81121534
transcript_147373.known	chrX	-	578	6	FSM	ENSG00000198157.11	ENST00000430960.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_4	20.3115730557729	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGATGAAAAAGGGGAAGA	NA	False	NA	-76	True	NA	NA	NA	81121683	81115053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118760_81119787_81119818_81121534
transcript_147374.known	chrX	-	547	6	FSM	ENSG00000198157.11	ENST00000491275.1	547	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	149.368001928124	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAAGAAGATGAAGAAGA	NA	False	NA	59	True	AGTAAA	-17	NA	81121688	81115110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_81115231_81116203_81116342_81118431_81118486_81118729_81118781_81119787_81119818_81121534
transcript_147378.known	chrX	+	928	5	FSM	ENSG00000131171.13	ENST00000481106.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	190.58200334764	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTCTCTCATTCCTA	81198233	True	NA	6	True	ATTAAA	-16	NA	81202127	81297597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_81202246_81202436_81202577_81276983_81277170_81278330_81278412_81297194
transcript_14738.known	chr1	+	456	3	FSM	ENSG00000185842.16	ENST00000453375.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	1	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGCCTGTCTTTACTTTA	NA	False	NA	3	True	AATAAA	-16	NA	224967439	224969829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_224967584_224968758_224968875_224969633
transcript_147381.known	chrX	+	1764	4	FSM	ENSG00000131171.13	ENST00000373212.6	1764	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	7.1336448530109	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTGTTCTTGGAGTTT	81198207	True	NA	12	True	AATAAA	-23	NA	81202101	81298547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_81202246_81276983_81277170_81278330_81278412_81297194
transcript_147385.known	chrX	+	3838	1	FSM	ENSG00000196767.9	ENST00000644024.2	3838	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTCCTGGTCTTA	83508042	True	NA	NA	False	AATAAA	-20	NA	83508289	83512127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_83508300_83512100
transcript_147386.known	chrX	-	6200	10	FSM	ENSG00000165259.14	ENST00000297977.9	6200	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	5.76280110217331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATTTCTTTATTTTAA	NA	False	NA	NA	False	AATAAA	-19	NA	84502453	84317873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_84322015_84326177_84326301_84333758_84333843_84336800_84336881_84344249_84344458_84361465_84361613_84440531_84440586_84468471_84469576_84475250_84475398_84502341
transcript_14739.known	chr1	-	3748	14	FSM	ENSG00000143815.15	ENST00000272163.9	3748	14	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_2	65.9230320437869	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	-225416920	True	NA	-6	True	AATAAA	-21	NA	225428038	225401501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_147395.known	chrX	-	475	3	FSM	ENSG00000165259.14	ENST00000465509.3	475	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	6.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATACTTCTCTTTGGTGAC	NA	False	NA	NA	False	AATAAA	-17	NA	84502453	84500024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_84500305_84501428_84501512_84502341
transcript_1474.known	chr1	+	431	5	FSM	ENSG00000171735.19	ENST00000461311.1	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	2052.40943770974	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCTTTAAGACAGTTCT	6762077	False	NA	NA	False	NA	NA	NA	6785551	6887787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756_6871841_6887653
transcript_147409.nnic	chrX	-	1091	3	NNC	ENSG00000184788.14	novel	2821	8	NA	NA	-25	17552	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	5.5	65	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCAGAATGATTTAAATAT	NA	False	NA	NA	False	AATAAA	-16	NA	85243936	85191223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_85191844_85224204_85224327_85243587
transcript_14741.nnic	chr1	-	3677	13	NIC	ENSG00000143815.15	novel	3748	14	NA	NA	-7	0	intron_retention	FALSE	canonical	3	93	junction_4	182.543659161309	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGAGCCTTTTTTTTTT	-225416975	True	NA	-6	True	AATAAA	-21	NA	225428093	225401501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225427953
transcript_147410.known	chrX	-	3707	3	FSM	ENSG00000184788.14	ENST00000647304.1	3707	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTCAAACAAATTTACAAG	NA	False	NA	NA	False	NA	NA	NA	85243870	85208775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_85212078_85224204_85224327_85243587
transcript_147415.known	chrX	+	6480	9	FSM	ENSG00000155008.16	ENST00000373173.7	6480	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	7.46240577829965	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGTTTTTTGTATATTA	85001549	True	NA	13	True	AATAAA	-18	NA	85003876	85093315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_85003928_85046445_85046551_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_147417.nnic	chrX	+	829	8	NIC	ENSG00000155008.16	novel	6480	9	NA	NA	-1	-5547	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	14.1262528792374	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGAGTATTACCTAAA	85001548	True	NA	8	True	AATAAA	-20	NA	85003875	85087768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_85003928_85051388_85051509_85054343_85054399_85055826_85055926_85067126_85067219_85073997_85074112_85074273_85074392_85087589
transcript_147420.known	chrX	-	5438	15	FSM	ENSG00000188419.14	ENST00000357749.7	5438	15	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_3	7.45325569185462	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGGTGTCATATTTTGT	NA	False	NA	0	True	AATAAA	-20	NA	86047558	85861179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_85864822_85873051_85873213_85878964_85879064_85894187_85894285_85900645_85900710_85901083_85901189_85911260_85911339_85956152_85956379_85957854_85957976_85958860_85958978_85963664_85964053_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_147425.known	chrX	-	2821	5	FSM	ENSG00000188419.14	ENST00000615443.1	2821	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	20.5243757517738	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACTGATTTATTTTGAA	NA	False	NA	NA	False	AATAAA	-27	NA	86047539	85969086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_85971587_85978766_85978892_85981736_85981810_86027490_86027558_86047483
transcript_147427.known	chrX	-	678	2	FSM	ENSG00000188419.14	ENST00000483950.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTCAAGTTTAAGATAAAG	NA	False	NA	NA	False	NA	NA	NA	86047561	86026957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_86027558_86047483
transcript_147428.known	chrX	+	2417	12	FSM	ENSG00000126733.22	ENST00000373125.9	2417	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.31487853899762	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTGTCACTGAGTATTT	86147740	True	NA	2	True	AATAAA	-16	NA	86148450	86832602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_86149109_86376823_86376863_86514278_86514392_86651035_86651168_86695020_86695180_86714547_86714721_86739746_86739883_86812855_86813005_86813129_86813278_86814687_86814835_86816033_86816100_86832105
transcript_14743.known	chr1	-	3812	14	FSM	ENSG00000143815.15	ENST00000338179.6	3812	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	194.234775282373	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGAGCCTTTTTTTTT	-225428836	True	NA	-7	True	AATAAA	-20	NA	225428855	225401502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225403464_225404403_225404527_225404625_225404707_225406663_225406833_225410290_225410417_225411336_225411441_225412453_225412646_225415277_225415333_225417983_225418181_225419262_225419453_225419714_225419799_225422076_225422278_225423910_225424090_225428705
transcript_147435.nnic	chrX	-	542	2	FSM	ENSG00000289575.1	ENST00000691872.1	521	2	-21	0	-21	0	multi-exon	FALSE	canonical	3	23	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGCAAGCCTGAATTTT	NA	False	NA	2	True	AATAAA	-26	NA	87728700	87723927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_87724213_87728443
transcript_147436.known	chrX	+	3206	2	FSM	ENSG00000174740.8	ENST00000312600.4	3206	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAGTGACTGCATAGTAT	91434672	True	NA	NA	False	AATAAA	-19	NA	91434838	91438584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91434895_91435434
transcript_147437.known	chrX	+	9022	11	FSM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	35.5392740499859	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATTGTTATTGTGTGT	91774802	True	NA	NA	False	AATAAA	-17	NA	91779374	92623230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_92201374_92201456_92263113_92263144_92387734_92387934_92468298_92468323_92618263
transcript_147440.nic	chrX	+	1308	5	ISM	ENSG00000102290.23	ENST00000682573.1	9022	11	0	787106	0	-43874	5prime_fragment	FALSE	canonical	3	68	junction_2	4.18330013267038	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTAAGCCATCACCC	91774802	True	NA	NA	False	AATAAA	-22	NA	91779374	91836124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_91779685_91809465_91809635_91810472_91810579_91811236_91811296_91835460
transcript_147441.known	chrX	+	4767	6	FSM	ENSG00000102290.23	ENST00000298274.12	4767	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	20.9723627662693	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAAACCCCGTCTCTTCT	NA	False	NA	NA	False	NA	NA	NA	91779260	91884007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460_91836045_91876780_91879274_91882906
transcript_147446.nic	chrX	+	1139	4	ISM	ENSG00000102290.23	ENST00000298274.12	4767	6	114	47883	0	-43874	5prime_fragment	FALSE	canonical	3	21	junction_1	25.6645020732269	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAGTAAGCCATCACCC	91774802	True	NA	NA	False	AATAAA	-22	NA	91779374	91836124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_91779685_91810472_91810579_91811236_91811296_91835460
transcript_147458.known	chrX	-	2649	1	FSM	ENSG00000186310.10	ENST00000373079.4	2649	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	91	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGCCTTTTCTCCTGACT	NA	False	NA	NA	False	AATAAA	-31	NA	93673578	93670929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_93670900_93673600
transcript_147466.known	chrX	+	3179	4	FSM	ENSG00000179083.7	ENST00000683942.1	3179	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGATTTGGGGTCTT	93674185	True	NA	16	True	AATAAA	-16	NA	93674205	93712265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_93674275_93674680_93674753_93698396_93698486_93709316
transcript_147473.nnic	chrX	-	2364	3	Intergenic	novelGene_73	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	26	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTCATTTGTCTTTTTA	NA	False	NA	-19	True	AGTAAA	-6	NA	94702930	94568820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_94570147_94697895_94698010_94702006
transcript_147479.nnic	chrX	-	678	3	Intergenic	novelGene_74	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	6.5	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGGATATGTCTTTATCA	NA	False	NA	3	True	ATTAAA	-18	NA	94698921	94620025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_94620436_94697895_94698010_94698767
transcript_147480.nnic	chrX	-	2633	3	Intergenic	novelGene_75	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	12	junction_1	20	25	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCGGATATGTCTTTATCA	NA	False	NA	3	True	ATTAAA	-18	NA	94704115	94620025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_94620436_94697895_94698010_94702006
transcript_147541.nnic	chrX	+	860	6	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625639	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	234.222629137323	446	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	NA	False	NA	15	True	AGTAAA	-20	NA	97310480	97469835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_97310659_97326577_97326723_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_147576.nnic	chrX	+	628	5	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625726	0	at_least_one_novel_splicesite	FALSE	canonical	2	44	junction_1	199.226472889523	407	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302586	True	NA	15	True	AGTAAA	-20	NA	97310567	97469835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_97310659_97348117_97348281_97383908_97384045_97429649_97429746_97469693
transcript_147584.nnic	chrX	+	497	4	NNC	ENSG00000147202.19	novel	3730	27	NA	NA	625694	0	at_least_one_novel_splicesite	FALSE	canonical	3	44	junction_1	228.702621080059	771	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCATTTTGTCTGGTGC	97302554	True	NA	15	True	AGTAAA	-20	NA	97310535	97469835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_97310659_97383908_97384045_97429649_97429746_97469693
transcript_147611.known	chrX	+	1309	6	FSM	ENSG00000281566.3	ENST00000626665.3	1309	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.23904756996088	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	98572116	True	NA	27	True	AATAAA	-29	NA	98573858	98865564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_98573933_98578985_98579075_98644527_98644575_98731530_98731578_98785026_98785125_98864610
transcript_147618.nic	chrX	+	1208	5	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	18.5118205479634	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	98572128	True	NA	27	True	AATAAA	-29	NA	98573870	98865564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98731530_98731578_98785026_98785125_98864610
transcript_147636.nnic	chrX	+	1191	4	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_3	14.3061758225833	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGACTAACCTTGCTTGT	98572047	True	NA	27	True	AATAAA	-29	NA	98573789	98865564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98731530_98731578_98864610
transcript_147639.nnic	chrX	+	1133	4	NIC	ENSG00000281566.3	novel	1309	6	NA	NA	-17	-13	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	18.0185090023194	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTGCAACTTAGAC	98572099	True	NA	14	True	AATAAA	-16	NA	98573841	98865551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98731530_98731585_98864610
transcript_147640.nnic	chrX	+	1257	4	NNC	ENSG00000281566.3	novel	625	4	NA	NA	-20	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20.0720922897661	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCTTGTCTGCAACTT	98572047	True	NA	10	True	AATAAA	-12	NA	98573789	98865547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_98573933_98644527_98644575_98811001_98811132_98864610
transcript_147641.nnic	chrX	+	1134	4	NIC	ENSG00000281566.3	novel	625	4	NA	NA	-11	-13	combination_of_known_splicesites	FALSE	canonical	2	4	junction_3	17.7951304200522	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGTCTGCAACTTAGAC	98572105	True	NA	14	True	AATAAA	-16	NA	98573847	98865551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_98573933_98644527_98644575_98841940_98842002_98864610
transcript_147643.nnic	chrX	+	357	4	NNC	ENSG00000281566.3	novel	625	4	NA	NA	3	34301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.09901951359278	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAATTTATAATATAATGT	98572070	True	NA	NA	False	AATAAA	-18	NA	98573812	98679527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_98573933_98578985_98579075_98644527_98644575_98679426
transcript_147644.nnic	chrX	+	793	3	NNC	ENSG00000281566.3	novel	625	4	NA	NA	3	-45458	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGATAATTCGCATTGAT	98572070	True	NA	NA	False	AATAAA	-19	NA	98573812	98599768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_98573933_98578985_98579075_98599184
transcript_147645.nic	chrX	+	921	3	ISM	ENSG00000281566.3	ENST00000627700.2	625	4	-62	219802	3	13	5prime_fragment	FALSE	canonical	2	9	junction_2	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCTGCAATTGTCACCT	98572070	True	NA	22	True	NA	NA	NA	98573812	98645239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_98573933_98578985_98579075_98644527
transcript_147646.known	chrX	+	822	2	FSM	ENSG00000281566.3	ENST00000650384.1	822	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAAAATGATGCT	98572067	True	NA	9	True	NA	NA	NA	98573809	98645226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_98573933_98644527
transcript_147651.nic	chrX	+	1144	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8655	102	-33	-102	3prime_fragment	FALSE	canonical	3	18	junction_3	5.40832691319598	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCCTATGAGGCATCT	100593320	True	NA	-96	True	AATAAA	-19	NA	100593590	100599783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
transcript_147652.nic	chrX	+	1246	5	ISM	ENSG00000000005.6	ENST00000373031.5	1205	7	8655	0	-33	0	3prime_fragment	FALSE	canonical	3	18	junction_3	5.40832691319598	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGATTGCTGCTGAAC	100593320	True	NA	6	True	AATAAA	-19	NA	100593590	100599885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_100594036_100594260_100594363_100597503_100597658_100599015_100599183_100599507
transcript_147653.known	chrX	+	542	3	FSM	ENSG00000000005.6	ENST00000485971.1	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGTCAGTGATTTGGGTC	100593353	True	NA	NA	False	AAGAAA	-19	NA	100593623	100597531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100594036_100594260_100594363_100597503
transcript_147670.known	chrX	-	3768	8	FSM	ENSG00000000003.15	ENST00000373020.9	3768	8	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_7	68.3493427405211	2733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATACCATTTCTGGTTTT	NA	False	NA	-33	True	AATAAA	-17	NA	100636806	100627107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_100629987_100630758_100630867_100632484_100632569_100633404_100633540_100633930_100634030_100635177_100635253_100635557_100635747_100636607
transcript_147672.known	chrX	+	2074	15	FSM	ENSG00000101811.14	ENST00000415585.6	2074	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	115.907972820101	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTGATACACATGACCTT	100815504	True	NA	27	True	AATAAA	-27	NA	100820358	100840932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100830807_100830868_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_147675.known	chrX	+	2570	14	FSM	ENSG00000101811.14	ENST00000372972.7	2570	14	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	28.094304419729	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATACATTTCATCCTAT	100815536	True	NA	NA	False	AATAAA	-18	NA	100820390	100841520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826633_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833473_100837338_100837450_100838238_100838365_100840713
transcript_147686.nic	chrX	+	774	3	ISM	ENSG00000101811.14	ENST00000415585.6	2074	15	24	18079	-8	-1404	5prime_fragment	FALSE	canonical	3	350	junction_2	9.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGAATTTCCATTG	100815528	True	NA	NA	False	NA	NA	NA	100820382	100822853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_100820475_100821526_100821606_100822250
transcript_147687.known	chrX	+	1693	14	FSM	ENSG00000101811.14	ENST00000475126.5	1693	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	114.129118200842	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACACTGCAAATTGATACA	100815562	True	NA	18	True	AATAAA	-18	NA	100820416	100840923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_100820475_100821526_100821606_100822250_100822421_100823291_100823429_100823885_100824006_100824119_100824258_100826684_100826758_100828039_100828103_100831514_100831657_100832733_100832910_100833179_100833270_100837338_100837450_100838238_100838365_100840713
transcript_147697.known	chrX	-	2921	14	FSM	ENSG00000188917.15	ENST00000372935.5	2921	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_12	39.3915258360514	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGTAGTTATCCCTAG	NA	False	NA	NA	False	NA	NA	NA	101052070	101009541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051643_101051734_101051816
transcript_147703.known	chrX	-	3106	13	FSM	ENSG00000188917.15	ENST00000545398.5	3106	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_12	30.727634142576	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAACATTCTCTAGTCCA	NA	False	NA	-7	True	AATAAA	-23	NA	101052116	101009345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101010708_101018970_101019071_101019283_101019404_101020486_101020589_101021100_101021316_101021967_101022063_101023469_101023617_101035612_101035684_101036973_101037074_101037916_101038052_101041316_101041372_101042041_101042313_101051783
transcript_14771.known	chr1	+	1596	4	FSM	ENSG00000143742.14	ENST00000366839.8	1596	4	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_3	3141.73402226647	4352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTGTTGAAGTTT	225760896	True	NA	14	True	AATAAA	-18	NA	225777836	225790466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225778013_225783299_225783369_225786861_225786986_225789239
transcript_14772.known	chr1	+	1420	3	FSM	ENSG00000143742.14	ENST00000651761.1	1420	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	3673	1741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTGTGTTGAAGTTTTT	225760931	True	NA	16	True	AATAAA	-20	NA	225777871	225790468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225778013_225783299_225783369_225789258
transcript_147727.known	chrX	+	2039	2	FSM	ENSG00000126950.8	ENST00000372930.5	2039	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	187	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCTGGACAAATACTGAA	101078479	True	NA	22	True	AATAAA	-23	NA	101078878	101096367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101079123_101094572
transcript_14773.known	chr1	+	548	3	FSM	ENSG00000143742.14	ENST00000650651.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3713.5	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTAGTCCCAGCTACT	225760889	True	NA	NA	False	AATAGA	-26	NA	225777829	225788266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225778013_225783299_225783369_225787970
transcript_147730.known	chrX	+	3377	23	FSM	ENSG00000102384.14	ENST00000684367.1	3377	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.7681633835313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCAAGGTGGGTGGATC	101095784	True	NA	NA	False	NA	NA	NA	101098187	101163795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101098235_101098443_101098540_101099808_101099931_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_147733.known	chrX	+	5584	22	FSM	ENSG00000102384.14	ENST00000682095.1	5584	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	7.74069553379661	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCTTTTTTTGTGCCTATT	101095800	True	NA	10	True	AATAAA	-20	NA	101098203	101166126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273_101102412_101109472_101109592_101109890_101109999_101120401_101120451_101120737_101120785_101126708_101126799_101127137_101127267_101127497_101127666_101128715_101128837_101129981_101130074_101132189_101132308_101132391_101132457_101140665_101140761_101145063_101145200_101146152_101146278_101147762_101147812_101147942_101148162_101161527_101161570_101162832
transcript_147746.nic	chrX	+	674	5	NIC	ENSG00000102384.14	novel	3377	23	NA	NA	-22	1112	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	16.3458710382775	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	101095762	True	NA	4	True	ATTAAA	-20	NA	101098165	101102407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101098249_101098443_101098540_101099808_101099931_101101057_101101297_101102273
transcript_147747.nic	chrX	+	809	5	NIC	ENSG00000102384.14	novel	622	4	NA	NA	-22	1112	combination_of_known_junctions	FALSE	canonical	2	14	junction_3	11.5839328382031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	101095762	True	NA	4	True	ATTAAA	-20	NA	101098165	101102407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101098249_101098443_101098540_101099808_101100066_101101057_101101297_101102273
transcript_147748.nic	chrX	+	552	4	ISM	ENSG00000102384.14	ENST00000423383.3	2867	21	-23	61029	-22	1112	5prime_fragment	FALSE	canonical	3	24	junction_1	10.1434160364686	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTGAGGAAATG	101095762	True	NA	4	True	ATTAAA	-20	NA	101098165	101102407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_101098249_101098443_101098540_101101057_101101297_101102273
transcript_14775.known	chr1	-	4109	25	FSM	ENSG00000196187.12	ENST00000366835.8	4109	25	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_17	41.2838875955257	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTTGCTTACCACACG	-225877045	True	NA	-12	True	AGTAAA	-17	NA	225882380	225845535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225846933_225847033_225847214_225848491_225848555_225848896_225849013_225849911_225850080_225852663_225852770_225853628_225853792_225855877_225855941_225856651_225856739_225856910_225857018_225859195_225859350_225860859_225860998_225862217_225862352_225862454_225862579_225862770_225862852_225865896_225865968_225866573_225866683_225867111_225867164_225867887_225868031_225871075_225871114_225871986_225872054_225874287_225874368_225877394_225877595_225879219_225879411_225882303
transcript_147756.known	chrX	-	1526	2	FSM	ENSG00000126953.8	ENST00000647480.1	1526	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTAGGCCAATCAGAAG	NA	False	NA	NA	False	NA	NA	NA	101348575	101345783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101346661_101347926
transcript_147757.known	chrX	-	2951	2	FSM	ENSG00000126953.8	ENST00000644112.2	2951	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101348402_101348532
transcript_147759.known	chrX	-	1210	2	FSM	ENSG00000126953.8	ENST00000372902.4	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	0	2121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348742	101345660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101346661_101348532
transcript_147760.known	chrX	-	1494	3	FSM	ENSG00000126953.8	ENST00000645279.1	1494	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGATTGAGAAGGCAT	NA	False	NA	-18	True	AATAAA	-18	NA	101348685	101345660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101346661_101348060_101348402_101348532
transcript_147763.known	chrX	+	399	5	FSM	ENSG00000241343.10	ENST00000471855.1	399	5	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	3501.47561750757	5707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	101391184	False	NA	25	True	AATAAA	-19	NA	101391201	101395795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391236_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_147764.nnic	chrX	+	486	5	NNC	ENSG00000241343.10	novel	399	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	3	140	junction_1	3503.50520015313	5722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	101391207	False	NA	25	True	AATAAA	-19	NA	101391224	101395795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_101391346_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_147773.known	chrX	+	2296	2	FSM	ENSG00000126945.9	ENST00000316594.6	2296	2	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_1	0	1263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAACTGATTGATTTTT	101396930	True	NA	26	True	AATAAA	-26	NA	101408221	101414133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101408320_101411935
transcript_147774.known	chrX	+	433	6	FSM	ENSG00000241343.10	ENST00000372849.8	433	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	3755.70726228762	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCACTTCATTTGTT	101305422	True	NA	16	True	AATAAA	-10	NA	101391015	101395786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101392049_101392096_101395334_101395458_101395727
transcript_147775.known	chrX	+	691	4	FSM	ENSG00000241343.10	ENST00000392994.7	691	4	0	0	0	0	multi-exon	FALSE	canonical	3	7278	junction_1	732.126127567284	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTCATTTGTTTGCTGTT	101305395	True	NA	23	True	AATAAA	-17	NA	101390988	101395793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334
transcript_147776.known	chrX	+	761	5	FSM	ENSG00000241343.10	ENST00000553110.8	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	5778	junction_4	1234.79580801848	26521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACAGTACACTGTAACAT	101305417	True	NA	6	True	AATAAA	-22	NA	101391010	101396155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391047_101391458_101391565_101391754_101391823_101395334_101395458_101395727
transcript_147777.known	chrX	+	710	4	FSM	ENSG00000241343.10	ENST00000465744.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	5778	junction_3	1408.19340527737	3179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATTTGTTTGCTGTTCA	101391096	False	NA	25	True	AATAAA	-19	NA	101391113	101395795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101391565_101391754_101391823_101395334_101395458_101395727
transcript_147778.known	chrX	-	1318	7	FSM	ENSG00000102393.14	ENST00000218516.4	1318	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	26.4033878297632	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTGCCAACTACTA	NA	False	NA	-19	True	ATTAAA	-20	NA	101407925	101397802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_147779.known	chrX	-	1254	7	FSM	ENSG00000102393.14	ENST00000676156.1	1254	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	96.518852505036	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTTTATTTTATTGCCAA	NA	False	NA	-25	True	ATTAAA	-14	NA	101407903	101397808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398100_101398369_101398568_101398784_101398947_101400665_101400758_101401667_101401810_101403810_101403986_101407709
transcript_147780.known	chrX	-	1089	6	FSM	ENSG00000102393.14	ENST00000674634.2	1089	6	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_3	28.6454184818445	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTACTATCAGTAATAAAG	NA	False	NA	NA	False	NA	NA	NA	101407903	101398279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101398568_101398784_101398947_101400665_101400758_101401631_101401810_101403810_101403986_101407709
transcript_14779.known	chr1	+	1635	9	FSM	ENSG00000143819.13	ENST00000272167.10	1635	9	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	20.4935203174076	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCTGGAACTCAGTGACA	225796016	True	NA	30	True	GATAAA	-17	NA	225810123	225845563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225810170_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_147791.nic	chrX	+	749	5	NIC	ENSG00000196440.12	novel	5399	16	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	6.41774882649672	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAAATTATTTTTGACTA	101417017	True	NA	NA	False	ATTAAA	-7	NA	101418247	101447877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997_101446045_101447493
transcript_147792.nic	chrX	+	1190	5	NIC	ENSG00000196440.12	novel	5399	16	NA	NA	-39	441	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	6.41774882649672	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAATATACTGATTTTC	101417017	True	NA	NA	False	AATAAA	-19	NA	101418247	101448318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997_101446045_101447493
transcript_147793.known	chrX	+	403	4	FSM	ENSG00000196440.12	ENST00000430461.5	403	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	5.8878405775519	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATTAGAAAAACAATTTTA	101417067	True	NA	NA	False	NA	NA	NA	101418297	101446132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101418371_101418909_101419001_101444051_101444156_101445997
transcript_147796.known	chrX	+	346	2	FSM	ENSG00000196440.12	ENST00000453574.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTGGTGGTTCTCAAAT	101417068	True	NA	16	True	TTTAAA	-35	NA	101418298	101419183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101418371_101418909
transcript_147799.nnic	chrX	+	1415	5	NNC	ENSG00000126947.13	novel	2125	4	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	75.9683322181026	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546897	True	NA	NA	False	AATAAA	-30	NA	101550502	101554700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808_101553168_101553921
transcript_147801.nnic	chrX	+	1605	5	NNC	ENSG00000126947.13	novel	2125	4	NA	NA	-113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	76.3904444286064	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	NA	False	NA	NA	False	AATAAA	-30	NA	101550433	101554700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808_101553289_101553921
transcript_147802.known	chrX	+	2125	4	FSM	ENSG00000126947.13	ENST00000372829.8	2125	4	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	19.6129209111409	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGTTGTCCTTGTCCTTGT	101546941	True	NA	NA	False	AATAAA	-30	NA	101550546	101554700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101550661_101550970_101551025_101551568_101551634_101552808
transcript_147808.known	chrX	+	655	1	FSM	ENSG00000204072.3	ENST00000602449.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	175	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101598016	101598671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101598000_101598700
transcript_14781.known	chr1	+	1789	9	FSM	ENSG00000143819.13	ENST00000614058.4	1789	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	98.0617630628779	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCGGCTGGAACTCAGT	225810400	False	NA	26	True	GATAAA	-13	NA	225810411	225845559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_225810616_225828724_225828913_225831778_225831960_225838653_225838882_225839216_225839347_225839828_225840038_225842365_225842475_225844497_225844624_225845145
transcript_147811.known	chrX	-	542	5	FSM	ENSG00000198960.11	ENST00000462302.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	53.260562332743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTCTGCAGGCAATGTT	NA	False	NA	NA	False	GGGGCT	-31	NA	101617913	101615512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101615761_101616671_101616767_101617282_101617371_101617502_101617585_101617884
transcript_147816.known	chrX	-	846	4	FSM	ENSG00000198960.11	ENST00000497931.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	19.6015872373189	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATGGTCCTTGTCCTTGA	NA	False	NA	NA	False	AATAAA	-28	NA	101617910	101615117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101615761_101616671_101616767_101617502_101617585_101617884
transcript_147818.nnic	chrX	-	661	4	NNC	ENSG00000198960.11	novel	846	4	NA	NA	-19	-2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	55.4035698809703	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCATGGTCCTTGTCCTT	NA	False	NA	NA	False	AATAAA	-26	NA	101618020	101615119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_101615468_101616671_101616767_101617502_101617585_101617884
transcript_147819.known	chrX	-	624	4	FSM	ENSG00000198960.11	ENST00000495964.1	624	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	58.1262992686328	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGAACCTGGGGCCCCAGG	NA	False	NA	NA	False	NA	NA	NA	101617976	101616395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101616767_101617291_101617371_101617502_101617585_101617884
transcript_147822.known	chrX	-	1840	3	FSM	ENSG00000198960.11	ENST00000361910.9	1840	3	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1.5	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAGAGTCATGGTCCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	101618000	101615124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101616767_101617502_101617585_101617884
transcript_147823.known	chrX	-	670	2	FSM	ENSG00000198960.11	ENST00000467089.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTTTGCCGAGCCCAA	NA	False	NA	NA	False	NA	NA	NA	101618000	101616212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101616767_101617884
transcript_147824.known	chrX	-	1928	4	FSM	ENSG00000198960.11	ENST00000539247.5	1928	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	57.8638248150105	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAGAGTCATGGTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	101618001	101615125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101616767_101617282_101617371_101617502_101617585_101617884
transcript_147825.known	chrX	+	3348	5	FSM	ENSG00000102401.20	ENST00000471229.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	28.6476438821764	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101620922	True	NA	27	True	AATAAA	-37	NA	101623150	101627843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623277_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_147828.known	chrX	+	3730	5	FSM	ENSG00000102401.20	ENST00000341189.8	3730	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	46.8401537145215	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTAAAGTTCTATC	101622785	False	NA	27	True	AATAAA	-37	NA	101622796	101627843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623277_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_147831.known	chrX	+	506	5	FSM	ENSG00000102401.20	ENST00000467808.5	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	66.1338604649691	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTGCTATTGTCGGGGA	101621027	False	NA	NA	False	NA	NA	NA	101623255	101624952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623431_101623813_101623894_101624157_101624219_101624479_101624551_101624833
transcript_147833.known	chrX	+	3318	5	FSM	ENSG00000102401.20	ENST00000537169.1	3318	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	67.4240313241503	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTACTGTGTAAAGTTCTA	101621132	False	NA	25	True	AATAAA	-35	NA	101623360	101627841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_101623431_101623785_101623894_101624157_101624219_101624479_101624551_101624833
transcript_147835.known	chrX	-	758	6	FSM	ENSG00000184867.14	ENST00000458024.5	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	87.8831041782207	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGCTGAGGCAGTGGCCC	NA	False	NA	NA	False	NA	NA	NA	101659831	101657310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659137_101659418_101659502_101659757
transcript_147836.known	chrX	-	612	6	FSM	ENSG00000184867.14	ENST00000479333.5	612	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	84.4952069646557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAAATACACCAGGGGGA	NA	False	NA	NA	False	GGGGCT	-18	NA	101659836	101657517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658570_101659075_101659149_101659418_101659502_101659757
transcript_147837.nic	chrX	-	2833	6	NIC	ENSG00000184867.14	novel	2819	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	107.138415146016	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGTTCTAATGCTTGAATT	NA	False	NA	0	True	AATAAA	-25	NA	101659851	101655280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_101657716_101658072_101658143_101658491_101658570_101659075_101659149_101659418_101659502_101659757
transcript_147841.known	chrX	-	914	5	FSM	ENSG00000184867.14	ENST00000413506.5	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	103.82286597855	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCGGAGACTTCCAGG	NA	False	NA	NA	False	GGGGCT	-23	NA	101659834	101657086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_101657716_101658072_101658143_101658460_101658526_101659075_101659149_101659757
transcript_147844.known	chrX	+	1080	3	FSM	ENSG00000184905.9	ENST00000329035.2	1080	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	60.5	984	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTACAGAATCTGTCTGTT	102123743	True	NA	10	True	AATAAA	-16	NA	102125702	102127711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102125807_102126372_102126446_102126808
transcript_147845.known	chrX	-	1106	3	NIC	ENSG00000204071.11	novel	1104	4	NA	NA	0	0	intron_retention	TRUE	canonical	3	12	junction_1	5	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTATACGGTTATCAGCCA	NA	False	NA	-5	True	AATAAA	-26	NA	102142505	102140475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_102141356_102141713_102141787_102142352
transcript_147849.known	chrX	-	860	3	FSM	ENSG00000184515.11	ENST00000543160.5	860	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGATAGACTATTTCATTT	NA	False	NA	-5	True	AATAAA	-19	NA	102155790	102153707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_102154303_102154743_102154811_102155592
transcript_147850.known	chrX	-	777	3	FSM	ENSG00000184515.11	ENST00000333643.4	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	13	3176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTACAGATAGACTATTTC	NA	False	NA	-9	True	AATAAA	-15	NA	102155977	102153711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_102154303_102154743_102154811_102155858
transcript_147854.known	chrX	-	634	3	FSM	ENSG00000158164.7	ENST00000289373.5	634	3	0	0	0	0	multi-exon	TRUE	canonical	3	866	junction_1	5	11495	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGACTCCTGTGGTTG	NA	False	NA	-7	True	AATAAA	-20	NA	102516739	102513681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_102514125_102515063_102515181_102516665
transcript_147861.nic	chrX	+	852	7	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	42.2153868736139	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597711	True	NA	3	True	ATTAAA	-17	NA	102599504	102650145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
transcript_147865.known	chrX	+	645	6	FSM	ENSG00000271147.8	ENST00000460026.6	645	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	42.9809260021233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATAGAGAAGCTGGCTTT	102597731	True	NA	NA	False	AATAGA	-25	NA	102599524	102639538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599573_102599705_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399
transcript_147869.nic	chrX	+	754	6	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_5	25.6249878048751	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597711	True	NA	3	True	ATTAAA	-17	NA	102599504	102650145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599573_102599705_102599848_102601463_102601510_102605481_102605654_102639399_102639534_102649953
transcript_147871.known	chrX	+	964	6	FSM	ENSG00000271147.8	ENST00000466616.5	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	44.4792086260536	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597732	True	NA	3	True	ATTAAA	-17	NA	102599525	102650145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102601463_102601510_102601879_102601978_102605481_102605654_102639399_102639534_102649953
transcript_147873.known	chrX	+	1848	6	FSM	ENSG00000271147.8	ENST00000476910.6	1848	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	40.2541923282532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGGCTTCTTTTACT	102597743	True	NA	NA	False	AATACA	-14	NA	102599536	102640507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879_102601978_102605481_102605654_102639399
transcript_147888.nic	chrX	+	887	5	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	16	junction_4	28.0301177307553	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597711	True	NA	3	True	ATTAAA	-17	NA	102599504	102650145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399_102639534_102649953
transcript_147892.known	chrX	+	668	4	FSM	ENSG00000271147.8	ENST00000475738.5	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	28.7672653471886	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCTGGTAAGCAAATAGAG	102597732	True	NA	NA	False	AATAGA	-14	NA	102599525	102639527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102601463_102601510_102605481_102605654_102639399
transcript_147894.nnic	chrX	+	753	4	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-7	0	intron_retention	FALSE	canonical	0	0	junction_3	36.7241972909779	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597711	True	NA	3	True	ATTAAA	-17	NA	102599504	102650145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102601463_102601510_102605481_102605654_102649953
transcript_147898.nic	chrX	+	841	4	NIC	ENSG00000271147.8	novel	964	6	NA	NA	-7	0	intron_retention	FALSE	canonical	3	15	junction_1	9.20144916122817	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAATGATCCTTTGTCAG	102597711	True	NA	3	True	ATTAAA	-17	NA	102599504	102650145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_102599848_102605481_102605654_102639399_102639534_102649953
transcript_147907.known	chrX	+	689	7	FSM	ENSG00000271147.8	ENST00000486740.6	689	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	33.1344064212548	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTATTGACTGAGACTGTG	102597743	True	NA	NA	False	NA	NA	NA	102599536	102714671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599573_102599705_102599860_102601463_102601510_102605481_102605654_102713781_102713850_102714188_102714267_102714536
transcript_147908.known	chrX	+	2899	6	FSM	ENSG00000125962.16	ENST00000246174.6	2899	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	43.5366512262944	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102599135	True	NA	17	True	AATAAA	-25	NA	102599167	102604159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599267_102599347_102599573_102599711_102599848_102600919_102601033_102601463_102601510_102601879
transcript_147911.known	chrX	+	2777	4	FSM	ENSG00000125962.16	ENST00000473968.7	2772	4	-5	0	-5	0	multi-exon	FALSE	canonical	3	30	junction_1	43.3922676163494	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597716	True	NA	17	True	AATAAA	-25	NA	102599509	102604159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102600919_102601033_102601463_102601510_102601879
transcript_147912.known	chrX	+	2636	3	FSM	ENSG00000125962.16	ENST00000479502.2	2636	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	22	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCCTAGTTCTTCAGC	102597744	True	NA	17	True	AATAAA	-25	NA	102599537	102604159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102599848_102601463_102601510_102601879
transcript_147914.known	chrX	+	3534	5	FSM	ENSG00000158301.20	ENST00000483720.7	3536	5	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.8523672079817	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAAGTGACCCTTCTTCAG	102710967	True	NA	11	True	AATAAA	-19	NA	102712447	102717731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102712553_102713129_102713218_102713781_102713850_102714188_102714267_102714536
transcript_147916.known	chrX	+	3451	4	FSM	ENSG00000158301.20	ENST00000332262.10	3451	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.6637929966641	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACCCTTCTTCAGTT	102710964	True	NA	13	True	AATAAA	-21	NA	102712444	102717733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102712553_102713781_102713850_102714188_102714267_102714536
transcript_147917.known	chrX	+	5155	4	FSM	ENSG00000198908.12	ENST00000457056.6	5155	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.6267856622271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTCCTTTATTTCT	102719827	True	NA	NA	False	AATAAA	-16	NA	102720742	102753540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102720826_102720956_102721092_102747816_102747912_102748698
transcript_147918.known	chrX	+	4031	3	FSM	ENSG00000198908.12	ENST00000447531.5	4031	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTTTTGAATCACTTAAT	102744828	True	NA	8	True	AATAAA	-15	NA	102745978	102752438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102746175_102747816_102747912_102748698
transcript_14792.known	chr1	-	1626	4	FSM	ENSG00000243709.1	ENST00000272134.5	1626	4	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_3	37.6061460697879	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTTGTAATTTTCTATT	-225887414	True	NA	-9	True	AATAAA	-38	NA	225889146	225886281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225887091_225887398_225887639_225887785_225888033_225888816
transcript_147922.known	chrX	+	3974	3	FSM	ENSG00000198908.12	ENST00000361229.8	3974	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	11	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAATCACTTAATATT	102719810	True	NA	11	True	AATAAA	-18	NA	102720725	102752441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_102720822_102720956_102721092_102748698
transcript_147926.known	chrX	-	795	3	FSM	ENSG00000133169.6	ENST00000372728.4	795	3	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	27.5	8475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATATTCTTTTTTTGT	NA	False	NA	-5	True	AATAAA	-18	NA	103064171	103062650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103063280_103063641_103063732_103064095
transcript_147927.known	chrX	-	1956	20	FSM	ENSG00000147206.17	ENST00000395065.8	1956	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.223296878269436	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTTGAGTCAGGCATTA	NA	False	NA	NA	False	AATAAA	-35	NA	103093143	103075809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103076001_103076240_103076302_103077613_103077747_103078559_103078633_103079220_103079264_103079358_103079475_103079583_103079643_103079762_103079871_103080012_103080069_103080147_103080217_103080575_103080613_103082254_103082365_103082759_103082849_103083003_103083074_103083192_103083274_103083397_103083503_103083608_103083693_103084341_103084496_103084714_103084884_103092995
transcript_147932.known	chrX	+	1066	2	FSM	ENSG00000102409.10	ENST00000372691.3	1066	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGGTGTGTGTGTACG	103196676	True	NA	-81	True	NA	NA	NA	103215123	103217099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103215239_103216148
transcript_147933.known	chrX	+	1312	3	FSM	ENSG00000102409.10	ENST00000372695.6	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_1	16	5981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGACTGATGATTATAGGA	103196660	True	NA	66	True	ATTAAA	-25	NA	103215107	103217246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103215239_103215681_103215765_103216148
transcript_14794.known	chr1	-	1680	7	FSM	ENSG00000143811.20	ENST00000343818.11	1680	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	428.279276744613	2546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTTGTTAGGCTTAAT	-225908514	True	NA	-3	True	AATAAA	-18	NA	225924250	225919877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225921857_225922080_225922203_225922384_225923700_225923772_225924043
transcript_147941.known	chrX	-	1174	3	FSM	ENSG00000180964.17	ENST00000372685.8	1174	3	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_2	5.5	8323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	NA	False	NA	-9	True	AATAAA	-20	NA	103255155	103252994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103254018_103254604_103254678_103255077
transcript_147942.known	chrX	-	1131	2	FSM	ENSG00000180964.17	ENST00000360000.8	1131	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	3358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	NA	False	NA	-9	True	AATAAA	-20	NA	103255185	103252994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103254018_103255077
transcript_147945.nnic	chrX	-	1224	3	NNC	ENSG00000204065.3	novel	1046	3	NA	NA	476	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	25.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	NA	False	NA	-17	True	AATAAA	-21	NA	103276274	103273690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_103274591_103275274_103275343_103276018
transcript_147946.known	chrX	-	1046	3	FSM	ENSG00000204065.3	ENST00000372680.2	1046	3	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_2	8	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATACAGTATCAGCCCATTT	NA	False	NA	-17	True	AATAAA	-21	NA	103276750	103273690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103274591_103275274_103275343_103276672
transcript_147947.known	chrX	-	736	3	FSM	ENSG00000133134.12	ENST00000449185.1	736	3	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_2	200.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGAGTCATAGTTTGC	NA	False	NA	NA	False	NA	NA	NA	103310935	103309671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310585
transcript_147949.known	chrX	-	843	3	FSM	ENSG00000133134.12	ENST00000372677.8	843	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_2	31	6319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCATTCTTTTTTAC	NA	False	NA	-1	True	AATAAA	-17	NA	103310990	103309345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310859
transcript_14795.known	chr1	-	1549	6	FSM	ENSG00000143811.20	ENST00000612039.4	1549	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	553.060358369681	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTGTTAGGCTTAATC	NA	False	NA	-2	True	AATAAA	-19	NA	225924340	225919876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225920621_225921207_225921372_225921551_225921645_225922203_225922384_225923700_225923772_225924043
transcript_147950.known	chrX	-	668	3	FSM	ENSG00000133134.12	ENST00000372674.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	169.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTACCTATTTCTTGTGGG	NA	False	NA	NA	False	NA	NA	NA	103311007	103309501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103309982_103310357_103310434_103310895
transcript_147951.known	chrX	+	1134	3	FSM	ENSG00000182916.8	ENST00000332431.5	1134	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	15.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACGTTTAAGACTCAGTC	103329705	True	NA	NA	False	AATAAA	-20	NA	103330238	103332326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103330305_103330922_103331041_103331376
transcript_147953.known	chrX	+	852	3	FSM	ENSG00000182916.8	ENST00000372666.1	852	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	32.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGCCTATCTGCATC	103329695	True	NA	NA	False	NA	NA	NA	103330228	103332088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103330305_103330976_103331041_103331376
transcript_14796.known	chr1	-	342	2	FSM	ENSG00000248322.1	ENST00000513672.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCTCCTCTTTAGTTTAT	-225937531	False	NA	0	True	ATTAAA	-14	NA	225937557	225936410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225936578_225937382
transcript_147960.known	chrX	+	699	2	FSM	ENSG00000185222.10	ENST00000372656.5	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTACACATTTGTAAAAAA	103350900	True	NA	-5	True	AATAAA	-5	NA	103356488	103358195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103356607_103357614
transcript_147961.known	chrX	+	1938	1	FSM	ENSG00000185222.10	ENST00000646896.1	1938	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGCAACAAGCAGCA	103350929	True	NA	96	True	AATAAA	-11	NA	103356517	103358455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103356500_103358500
transcript_147962.known	chrX	+	1028	3	FSM	ENSG00000185222.10	ENST00000372661.6	1028	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_2	4.5	7633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAACAAGCAGCACGTATTA	103350917	True	NA	103	True	AATAAA	-18	NA	103356505	103358462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103356607_103357082_103357162_103357614
transcript_147968.known	chrX	+	805	2	FSM	ENSG00000166681.14	ENST00000372635.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTAAAAAGCAATCTATAC	103376287	False	NA	31	True	AATAAA	-4	NA	103376406	103378060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103376614_103377462
transcript_147969.known	chrX	+	810	3	FSM	ENSG00000166681.14	ENST00000361298.9	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_2	484.5	8708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGAACATTTCTGTGTG	103333378	True	NA	135	True	ATTAAA	-17	NA	103376537	103378164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103376614_103377027_103377107_103377509
transcript_14797.nic	chr1	-	1565	2	ISM	ENSG00000143768.13	ENST00000366820.10	2019	4	1497	0	378	0	3prime_fragment	FALSE	canonical	3	215	junction_1	0	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCTGTTTTTAATT	-225939697	False	NA	-5	True	AATAAA	-14	NA	225939723	225936602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_225937805_225939360
transcript_147970.known	chrX	+	913	3	FSM	ENSG00000166681.14	ENST00000372645.3	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_2	1981.5	4002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTTATTGTCTCATTAA	103376239	False	NA	48	True	AATAAA	-21	NA	103376394	103378077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103376614_103377027_103377107_103377462
transcript_147971.known	chrX	+	753	2	FSM	ENSG00000166681.14	ENST00000372634.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	3784	junction_1	0	1662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTATACATTTATTGTCT	103376836	False	NA	42	True	AATAAA	-15	NA	103376915	103378071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103377107_103377509
transcript_147981.known	chrX	+	348	2	FSM	ENSG00000281091.3	ENST00000628546.1	348	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTCACTACCCTTCCTT	103404244	True	NA	NA	False	NA	NA	NA	103404817	103408299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103405024_103408157
transcript_147986.known	chrX	+	681	4	FSM	ENSG00000133142.19	ENST00000490644.5	681	4	0	0	0	0	multi-exon	TRUE	canonical	2	19	junction_2	394.594306429612	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGGAGGGAGAGTCAGAGA	103575467	True	NA	89	True	GATAAA	-45	NA	103585522	103586905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585625_103585858_103586108_103586218_103586292_103586648
transcript_147992.known	chrX	+	1571	3	FSM	ENSG00000133142.19	ENST00000472745.1	1571	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	403	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCATAAAAATAATAAAATA	103575477	True	NA	-23	True	AAAACA	-11	NA	103585532	103587694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585625_103585858_103586292_103586648
transcript_147994.known	chrX	+	338	3	FSM	ENSG00000133142.19	ENST00000425011.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	77.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAAGGATAAAGGAAAGCC	103575559	True	NA	33	True	AAAACA	-27	NA	103585614	103586849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585684_103586218_103586292_103586653
transcript_147997.known	chrX	+	1008	3	FSM	ENSG00000133142.19	ENST00000494801.5	1008	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_2	395.5	1232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGTACATTTTTGTAAAA	103575507	True	NA	23	True	ATTAAA	-31	NA	103585562	103587526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103585625_103586218_103586292_103586653
transcript_147998.known	chrX	+	1166	4	NNC	ENSG00000133142.19	novel	1008	3	NA	NA	2	-4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	429.123395876861	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACAGTGAATATTTGAAT	103575461	True	NA	8	True	AATAAA	-15	NA	103585516	103587725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_103585625_103586218_103586292_103586653_103586862_103586948
transcript_147999.known	chrX	+	1056	3	FSM	ENSG00000196507.11	ENST00000372627.10	1056	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	21.5	913	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACAGTATCAGCCCGTTT	103605450	True	NA	21	True	AATAAA	-32	NA	103607962	103609927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103608059_103608603_103608674_103609037
transcript_14800.known	chr1	-	3987	7	FSM	ENSG00000143751.10	ENST00000272091.8	3987	7	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_1	15.6808446484521	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-225994934	True	NA	-6	True	AATAAA	-23	NA	225999343	225982701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_225985524_225987895_225988389_225991242_225991364_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_148003.known	chrX	+	721	3	FSM	ENSG00000172465.14	ENST00000372626.7	721	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGACTTTCTGTTTGCAT	103628672	True	NA	NA	False	NA	NA	NA	103628703	103630447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103628794_103629493_103629562_103629884
transcript_148004.known	chrX	+	1164	3	FSM	ENSG00000172465.14	ENST00000372624.3	1164	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103628971	True	NA	NA	False	AATAAA	-24	NA	103628998	103630953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103629026_103629493_103629562_103629884
transcript_148006.nnic	chrX	+	1701	2	NNC	ENSG00000172465.14	novel	1200	3	NA	NA	177	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103629165	False	NA	NA	False	AATAAA	-24	NA	103629175	103630953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_103629808_103629884
transcript_148007.nic	chrX	+	1274	2	ISM	ENSG00000172465.14	ENST00000372624.3	1164	3	358	0	358	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAATCCTATGTTTTTTTC	103629346	False	NA	NA	False	AATAAA	-24	NA	103629356	103630953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_103629562_103629884
transcript_148010.known	chrX	-	849	5	FSM	ENSG00000123562.18	ENST00000418819.5	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_4	691.737847742915	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGTTAATGAAGTTGTGGC	NA	False	NA	NA	False	AAGAAA	-31	NA	103688041	103676496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678601_103684680_103684730_103685170_103685261_103687988
transcript_148012.known	chrX	-	899	5	FSM	ENSG00000123562.18	ENST00000434230.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	705.391557930771	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATGAAGTTGTGGCAG	NA	False	NA	NA	False	AAGAAA	-33	NA	103688038	103676494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103687988
transcript_14802.nnic	chr1	-	820	5	NNC	ENSG00000143751.10	novel	3987	7	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	55.3398590529466	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACCATTTCTAATATTCT	-225994978	True	NA	-6	True	AATAAA	-23	NA	225999387	225982701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_225982927_225992397_225992568_225992890_225993003_225995265_225995384_225999192
transcript_148020.known	chrX	-	1824	4	FSM	ENSG00000123562.18	ENST00000360458.5	1824	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	699.718673626924	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTGTAGTGTGCCTTTCA	NA	False	NA	-2	True	AATAAA	-27	NA	103688064	103675495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678601_103685170_103685261_103687988
transcript_148022.known	chrX	-	1965	4	FSM	ENSG00000123562.18	ENST00000433176.6	1965	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	752.713461787123	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATTTGTAGTGTGCCT	NA	False	NA	-6	True	AATAAA	-23	NA	103688158	103675499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678652_103685170_103685261_103687988
transcript_148027.known	chrX	-	582	3	FSM	ENSG00000123562.18	ENST00000492116.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	70	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCGTTTAAGAATAGA	NA	False	NA	NA	False	AAGAAA	-32	NA	103688122	103676693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103685170_103685261_103687988
transcript_148028.known	chrX	-	869	5	FSM	ENSG00000123562.18	ENST00000442614.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	737.224991098376	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAGGAGTATGCAAATTG	NA	False	NA	NA	False	AAGAAA	-16	NA	103686709	103676553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103677052_103678498_103678652_103684680_103684730_103685170_103685261_103686630
transcript_148029.known	chrX	+	2086	3	FSM	ENSG00000231154.1	ENST00000435306.1	2086	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTATTTCTTTAATAAGGA	103687060	True	NA	12	True	AATAAA	-24	NA	103687283	103691772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103687487_103687951_103689481_103691418
transcript_148034.known	chrX	-	2063	7	FSM	ENSG00000188828.13	ENST00000480725.2	2063	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.74535599249993	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTATTGAGCATGTACT	NA	False	NA	NA	False	NA	NA	NA	103728624	103718347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103719272_103722151_103722293_103723855_103723939_103724077_103724302_103724540_103724609_103724897_103725029_103728132
transcript_148038.known	chrX	+	732	3	FSM	ENSG00000179363.7	ENST00000319560.7	732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCATTTGTCTTCCCTC	NA	False	NA	NA	False	AATAAA	-17	NA	103710908	103714032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103711077_103712235_103712361_103713593
transcript_148041.known	chrX	+	2896	7	FSM	ENSG00000123560.14	ENST00000619236.1	2896	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_6	8.5374989832438	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCGTGTCCTTTGAGTGAA	103776531	True	NA	6	True	AATAAA	-23	NA	103776849	103792619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103777000_103785581_103785769_103786464_103786622_103787797_103787967_103788436_103788511_103789332_103789399_103790526
transcript_148046.known	chrX	+	1666	4	FSM	ENSG00000158427.15	ENST00000419165.5	1666	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	75.455652906562	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGGTTCATTCTG	103918851	True	NA	NA	False	AATAAA	-25	NA	103918895	103965987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103919293_103962020_103962724_103964505_103964623_103965538
transcript_148047.known	chrX	+	663	4	FSM	ENSG00000158427.15	ENST00000569577.1	663	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	66.9593574906118	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAATCGTTGTTGTCT	103962492	True	NA	NA	False	AATAAA	-6	NA	103962674	103965968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103962724_103964227_103964295_103964505_103964623_103965538
transcript_148049.known	chrX	+	2002	2	FSM	ENSG00000158427.15	ENST00000455723.1	2002	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGTCAAAAGAAAAAGA	103919043	True	NA	NA	False	CATAAA	-33	NA	103919186	103932911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103919293_103931015
transcript_14805.known	chr1	+	799	5	FSM	ENSG00000163041.13	ENST00000366816.5	799	5	0	0	0	0	multi-exon	TRUE	canonical	2	82	junction_1	2222.70842667229	37491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAATTTCTCTTCTTCCTG	226061753	True	NA	NA	False	NA	NA	NA	226061850	226071523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062095_226062734_226062812_226064328_226064480_226065655_226065810_226071350
transcript_148052.known	chrX	-	576	2	FSM	ENSG00000231728.5	ENST00000674336.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAACTATGTTGAATTGGC	NA	False	NA	NA	False	AGTAAA	-12	NA	103919193	103845150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_103845365_103918831
transcript_148053.known	chrX	+	652	3	FSM	ENSG00000158427.15	ENST00000540220.6	652	3	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	18	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	103962444	True	NA	NA	False	AATAAA	-14	NA	103962626	103965976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103962724_103964505_103964623_103965538
transcript_148054.known	chrX	+	2186	3	FSM	ENSG00000158427.15	ENST00000436583.5	2186	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	70	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTGACTCTGTGGTTC	103962486	True	NA	NA	False	AATAAA	-19	NA	103962668	103965981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_103964295_103964505_103964623_103965538
transcript_148058.nnic	chrX	-	475	3	NNC	ENSG00000123569.10	novel	915	3	NA	NA	-19196	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGCATGTCTACTGGGT	NA	False	NA	NA	False	AATAAA	-13	NA	104032904	104011146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104011464_104012689_104012749_104032805
transcript_148059.nnic	chrX	+	824	5	NNC	ENSG00000101812.15	novel	1875	3	NA	NA	-7529	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.433012701892219	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTGTGTAATTAGACAAG	NA	False	NA	NA	False	AATAAA	-21	NA	104032426	104042454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_104032644_104032788_104032975_104040827_104040887_104041087_104041107_104042111
transcript_148075.nnic	chrX	-	741	4	NNC	ENSG00000269226.7	novel	947	3	NA	NA	-46	-319	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_3	63.1893099257215	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTTGTTGTCTGACTCTGT	NA	False	NA	NA	False	AATAAA	-14	NA	104076258	104072886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104073325_104074240_104074358_104074568_104074636_104076139
transcript_148076.known	chrX	-	2286	3	FSM	ENSG00000269226.7	ENST00000620307.4	2286	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	66.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAAGGGTATTTTTTA	NA	False	NA	NA	False	AATAAA	-25	NA	104076194	104063870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_104065985_104074240_104074358_104076139
transcript_148077.nnic	chrX	-	423	3	NNC	ENSG00000269226.7	novel	2286	3	NA	NA	-57	549	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	66.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTCTACAGTATTTTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	104076269	104072018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104072195_104074240_104074358_104076139
transcript_148078.known	chrX	-	947	3	FSM	ENSG00000269226.7	ENST00000598087.3	947	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	16	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTGGGTTCTCTTGCCTT	NA	False	NA	NA	False	NA	NA	NA	104076212	104072567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_104073325_104074240_104074358_104076139
transcript_148080.known	chrX	+	1241	4	FSM	ENSG00000166707.12	ENST00000422784.5	1241	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	1.24721912892465	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	104112308	True	NA	5	True	TATAAA	-8	NA	104112543	104115842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_104113002_104113194_104113247_104113433_104113574_104115251
transcript_148081.nnic	chrX	+	1289	4	NNC	ENSG00000166707.12	novel	1241	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.29983164553722	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	104112287	True	NA	5	True	TATAAA	-8	NA	104112522	104115842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_104113002_104113194_104113274_104113433_104113574_104115251
transcript_148082.nnic	chrX	-	499	4	NNC	ENSG00000269743.3	novel	731	2	NA	NA	57	-319	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.816496580927726	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGTGGTTTATTAC	NA	False	NA	NA	False	ATTAAA	-23	NA	104156931	104130922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104131224_104131847_104131946_104136815_104136862_104156877
transcript_148083.nnic	chrX	-	2179	3	NNC	ENSG00000269743.3	novel	6207	2	NA	NA	44587	-1070	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGCGTGATATATATTT	NA	False	NA	NA	False	AATAAA	-20	NA	104112401	104100283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104102211_104111307_104111474_104112315
transcript_148085.known	chrX	+	312	3	FSM	ENSG00000166707.12	ENST00000603049.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGAGAAATAACGGGGGAA	104112653	False	NA	NA	False	AATAAA	-33	NA	104112888	104113580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_104113002_104113194_104113247_104113433
transcript_148087.nnic	chrX	+	1122	3	NIC	ENSG00000166707.12	novel	2940	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCATGTCTCTGTGTGATG	104112287	True	NA	5	True	TATAAA	-8	NA	104112522	104115842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_104113002_104113194_104113247_104115251
transcript_148089.nnic	chrX	-	512	3	NNC	ENSG00000269743.3	novel	731	2	NA	NA	-2	-319	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGGGGTGGTTTATTAC	NA	False	NA	NA	False	ATTAAA	-23	NA	104156990	104130922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104131224_104131847_104131946_104156877
transcript_148090.nnic	chrX	-	512	3	NNC	ENSG00000269743.3	novel	731	2	NA	NA	0	-326	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAAGTTTTGGGGTGGT	NA	False	NA	NA	False	ATTAAA	-16	NA	104157009	104130929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_104131224_104144505_104144592_104156877
transcript_148091.known	chrX	-	731	2	FSM	ENSG00000269743.3	ENST00000467290.1	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGGATAGTGGGATGCTT	NA	False	NA	NA	False	NA	NA	NA	104156988	104130603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_104131224_104156877
transcript_148095.known	chrX	+	7624	6	FSM	ENSG00000123575.9	ENST00000493442.2	7624	6	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	9.26498785752038	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCGTGTGTGTGTTTCTT	104163281	True	NA	16	True	AATAAA	-24	NA	104166452	104195902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_104166983_104175622_104175843_104186065_104186216_104186459_104186622_104188039_104188307_104189607
transcript_148101.known	chrX	+	4173	4	FSM	ENSG00000157502.13	ENST00000357175.6	4173	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.88561808316413	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGATTTTTACTTCATC	106168210	True	NA	6	True	AATAAA	-17	NA	106168304	106208956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106168426_106171011_106171140_106203984_106204171_106205218
transcript_148103.nnic	chrX	-	785	3	Genic_Genomic	ENSG00000224816.1	novel	899	1	NA	NA	-799	1293	multi-exon	FALSE	canonical	1	1	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTGCAGATTATTTTT	NA	False	NA	NA	False	AATAAA	-17	NA	106468239	106465248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chrX_-_106465458_106466438_106466689_106467913
transcript_148105.known	chrX	+	3852	14	FSM	ENSG00000147231.14	ENST00000372548.9	3852	14	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_8	7.30080647243364	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTTTTTGGTCTCCTGTC	106611750	True	NA	6	True	ATTAAA	-16	NA	106611977	106679439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106612724_106622650_106622794_106625089_106625283_106632624_106632734_106632931_106633024_106633129_106633253_106636542_106636648_106637759_106637925_106639526_106639688_106640551_106640722_106648312_106648387_106662014_106662306_106669162_106669331_106678127
transcript_148108.known	chrX	+	4098	7	FSM	ENSG00000133138.20	ENST00000481617.6	4098	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	4.85340659285368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAACAAATTTATAAGAAAAA	106801297	True	NA	NA	False	AATGAA	-4	NA	106802704	106830083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169
transcript_148113.known	chrX	+	2589	12	FSM	ENSG00000133138.20	ENST00000310452.6	2589	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	6.00688310424792	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGAATTGTGTTTCTGA	106801281	True	NA	NA	False	AATAAA	-26	NA	106802688	106849831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_106802984_106818662_106818774_106820876_106820996_106821976_106822203_106823225_106823467_106826029_106826238_106827169_106827338_106839307_106839458_106840047_106840199_106840669_106840885_106848185_106848304_106849244
transcript_148121.nic	chrX	-	1761	8	FSM	ENSG00000089682.17	ENST00000685964.1	7005	8	-9	5253	-8	0	multi-exon	FALSE	canonical	0	0	junction_3	25.3288574635368	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-12	True	AATAAA	-21	NA	107118831	107067137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_148126.known	chrX	-	1662	7	FSM	ENSG00000089682.17	ENST00000372479.7	1662	7	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	15.8157797433098	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTTTACTAGAGCCCA	NA	False	NA	-12	True	AATAAA	-21	NA	107118804	107067137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107067694_107069254_107069403_107088435_107088840_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_148137.known	chrX	-	3315	8	FSM	ENSG00000089682.17	ENST00000495517.5	3315	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.943828249997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATTACAGACAGATACAT	NA	False	NA	NA	False	AAGAAA	-3	NA	107118823	107066299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107067694_107069254_107070426_107088734_107088840_107113396_107113469_107115351_107115557_107115861_107116055_107116649_107116767_107118765
transcript_148141.nic	chrX	-	1778	9	NIC	ENSG00000198088.10	novel	1755	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_3	8.60141703441939	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	NA	False	NA	-44	True	AATAAA	-21	NA	107206433	107123471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_107124333_107147742_107147810_107150855_107150968_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
transcript_148144.nic	chrX	-	1717	8	NIC	ENSG00000198088.10	novel	1755	9	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	8.01529150806031	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	NA	False	NA	-44	True	AATAAA	-21	NA	107206484	107123471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107154095_107154247_107167648_107167785_107175088_107175194_107206272
transcript_148148.known	chrX	-	1515	7	FSM	ENSG00000198088.10	ENST00000484614.5	1515	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	9.77098880473324	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGTAATACTGAAATTAAC	NA	False	NA	-44	True	AATAAA	-21	NA	107206433	107123471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107124333_107147742_107147810_107153171_107153307_107153453_107153504_107167648_107167785_107175088_107175194_107206272
transcript_148162.known	chrX	+	2070	7	FSM	ENSG00000147224.13	ENST00000372435.10	2070	7	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_5	13.0384048104053	6922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGGTCTGTATCATACA	107622447	True	NA	16	True	AATAAA	-19	NA	107628509	107651026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_148170.known	chrX	+	1434	6	FSM	ENSG00000147224.13	ENST00000372418.4	1434	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	165.70141821964	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAACCCCAAACCTAGTC	107622427	True	NA	NA	False	NA	NA	NA	107628489	107650469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_148172.known	chrX	+	996	6	FSM	ENSG00000147224.13	ENST00000674826.1	996	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	167.733836777199	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATCCCACATCAGGTATA	107622453	True	NA	79	True	NA	NA	NA	107628515	107650142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647766_107649939
transcript_148176.known	chrX	+	444	2	FSM	ENSG00000147224.13	ENST00000646815.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGACTTTGTGATTGGCAA	107622447	True	NA	NA	False	AATAAA	-16	NA	107628509	107630219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107630016
transcript_148177.known	chrX	+	1450	7	FSM	ENSG00000147224.13	ENST00000643795.2	1450	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	152.945160832967	1259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGGGGTCTGTATCATAC	NA	False	NA	15	True	AATAAA	-18	NA	107628427	107651025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107640901_107641001_107642365_107642491_107645176_107645351_107647605_107647703_107650577
transcript_148178.known	chrX	+	628	3	FSM	ENSG00000147224.13	ENST00000372419.3	628	3	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTGTTCACCTTA	107622467	True	NA	NA	False	AATAAA	-17	NA	107628529	107641124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_107628751_107639294_107639479_107640901
transcript_14818.known	chr1	+	1151	4	FSM	ENSG00000163041.13	ENST00000655399.1	1151	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	2565.50194352338	3440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATACCTGCTTTTGGTCTT	225971731	True	NA	NA	False	ATTAAA	-11	NA	226062749	226071997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062949_226064328_226064480_226065655_226065810_226071350
transcript_148180.known	chrX	-	956	4	FSM	ENSG00000157514.18	ENST00000506081.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	50.6118124112895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTCCACTCCAGCGACA	NA	False	NA	NA	False	NA	NA	NA	107777067	107714369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107775099_107775526_107776969
transcript_148181.known	chrX	-	1812	3	FSM	ENSG00000157514.18	ENST00000372390.8	1812	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	53.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107716545	107713220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107716314
transcript_148182.known	chrX	-	2027	3	FSM	ENSG00000157514.18	ENST00000372397.6	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	27	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107717135	107713220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107716689
transcript_148183.known	chrX	-	2269	3	FSM	ENSG00000157514.18	ENST00000372383.9	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	47	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTCTGACTGAGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	107775787	107713220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_107714750_107715898_107715951_107775099
transcript_148188.nnic	chrX	+	366	3	Antisense	novelGene_ENSG00000236064.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	4	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCACACTGATATTTGAC	NA	False	NA	NA	False	AGTAAA	-15	NA	107935762	107938730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_107935838_107937947_107938012_107938503
transcript_148194.nnic	chrX	+	927	6	NNC	ENSG00000277883.1	novel	1785	3	NA	NA	-38316	415	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_3	4.07921561087423	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTAGTCAAGGTTCT	NA	False	NA	NA	False	ATTAAA	-12	NA	107935761	107985423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_107935838_107937947_107938012_107938503_107938632_107977089_107977180_107984537_107984709_107985025
transcript_148197.nnic	chrX	-	864	4	NNC	ENSG00000170925.3	novel	1248	3	NA	NA	-42	3829	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.69967317119759	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGCTTTTGTTACCTT	NA	False	NA	NA	False	AATAAA	-34	NA	107982412	107977034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_107977159_107981413_107981560_107981668_107982160_107982309
transcript_148199.known	chrX	-	779	6	FSM	ENSG00000101843.19	ENST00000372295.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	236.793074223044	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGTTCTACTGTTGT	NA	False	NA	NA	False	NA	NA	NA	108091542	108084774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_148200.known	chrX	-	878	6	FSM	ENSG00000101843.19	ENST00000372296.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.717729530003	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTAATGTTCCTCCAT	NA	False	NA	NA	False	NA	NA	NA	108091542	108084596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108087973_108088095_108088100_108088751_108088851_108091406
transcript_148203.known	chrX	-	1470	5	FSM	ENSG00000101843.19	ENST00000217958.8	1470	5	0	0	0	0	multi-exon	FALSE	canonical	3	585	junction_2	10.688779163216	1634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAATTTTTCTTTCAA	NA	False	NA	-18	True	AATAAA	-13	NA	108091542	108084206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108088751_108088851_108091406
transcript_148205.known	chrX	-	768	5	FSM	ENSG00000101843.19	ENST00000361815.9	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	227.476372399421	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGAGTTACTTGTTCGAA	NA	False	NA	NA	False	TATAAA	-19	NA	108091542	108084829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087764_108087853_108087952_108088100_108088751_108088851_108091406
transcript_148207.known	chrX	-	713	4	FSM	ENSG00000101843.19	ENST00000340200.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	280.43577200889	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTGTTCCTGCTGAG	NA	False	NA	NA	False	TATAAA	-6	NA	108091520	108084842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108085128_108087685_108087853_108087952_108088100_108091406
transcript_148210.known	chrX	+	2501	14	FSM	ENSG00000101844.18	ENST00000372246.7	2501	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.38637948978852	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	108091403	True	NA	13	True	AATAAA	-22	NA	108091783	108154671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108091837_108126076_108126188_108126792_108127095_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_148211.known	chrX	+	2205	13	FSM	ENSG00000101844.18	ENST00000372232.8	2205	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	5.50946155868853	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTGACAGCCATATTT	108091397	True	NA	13	True	AATAAA	-22	NA	108091777	108154671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108091837_108126076_108126188_108128780_108128853_108131259_108131359_108134056_108134159_108134338_108134412_108137090_108137171_108137803_108137992_108138112_108138192_108150151_108150298_108151801_108151859_108152978_108153088_108153641
transcript_148214.nic	chrX	-	1998	6	ISM	ENSG00000197565.17	ENST00000621266.4	6627	44	-39	57220	-39	964	5prime_fragment	FALSE	canonical	2	15	junction_3	6.15142259969188	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAACCTCAAGCCTAAAT	NA	False	NA	NA	False	NA	NA	NA	108438469	108212827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_108214229_108219697_108219743_108221239_108221375_108310747_108310829_108437941_108437994_108438185
transcript_148216.known	chrX	-	1889	4	FSM	ENSG00000197565.17	ENST00000461897.5	1889	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.0213499897497	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGTATGTATGTA	NA	False	NA	-19	True	AATAAA	-19	NA	108438430	108267641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_108269153_108310747_108310829_108437941_108437994_108438185
transcript_148220.known	chrX	+	522	3	FSM	ENSG00000237863.3	ENST00000656850.1	522	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAAAGTGCTTTGAGT	108736431	False	NA	NA	False	TTTAAA	-26	NA	108736480	108738689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_108736592_108737729_108737880_108738428
transcript_148222.known	chrX	+	2692	5	FSM	ENSG00000101888.12	ENST00000218004.5	2692	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	47.097637945018	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATTTTCTCAAGATTGT	109535694	True	NA	13	True	AATAAA	-14	NA	109535780	109544684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_109535978_109536936_109537022_109538044_109538132_109541474_109541620_109542506
transcript_148223.known	chrX	+	2602	4	FSM	ENSG00000101888.12	ENST00000372106.6	2602	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	11.4406682011537	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTTTAAGGTCTTTTG	109535660	True	NA	27	True	AATAAA	-28	NA	109536843	109544698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_109537022_109538044_109538132_109541474_109541620_109542506
transcript_148225.known	chrX	+	1085	4	FSM	ENSG00000101888.12	ENST00000372103.1	1085	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	54.2361093327642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATGTTCAGTGGTCGTT	109535934	False	NA	NA	False	NA	NA	NA	109537117	109543206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_109537271_109538044_109538132_109541474_109541620_109542506
transcript_148229.known	chrX	-	4891	16	FSM	ENSG00000068366.21	ENST00000672401.1	4891	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_14	37.2304534845691	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATTTGTACTTCATTAT	NA	False	NA	-3	True	AATAAA	-18	NA	109733257	109641334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109696143_109696197_109733138
transcript_148231.known	chrX	-	5032	16	FSM	ENSG00000068366.21	ENST00000348502.10	5032	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_14	53.2596991688421	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAATTTGTACTTCATT	NA	False	NA	-5	True	AATAAA	-16	NA	109733403	109641336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683373_109696143_109696197_109733138
transcript_148232.known	chrX	-	4602	15	FSM	ENSG00000068366.21	ENST00000672282.1	4602	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_14	56.4009426032102	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTTGGATTTGGAGAGAA	NA	False	NA	-113	True	GATAAA	-11	NA	109733220	109641533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683376_109733138
transcript_148233.known	chrX	-	4971	15	FSM	ENSG00000068366.21	ENST00000502391.6	4971	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	59.2831755050215	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATGAGAACAGATAAAGAT	NA	False	NA	NA	False	NA	NA	NA	109733325	109641560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109644187_109659353_109659512_109661530_109661646_109663210_109663403_109665419_109665495_109668100_109668274_109669033_109669174_109674401_109674474_109677987_109678112_109678264_109678416_109680997_109681137_109681265_109681376_109682718_109682897_109683135_109683667_109733138
transcript_148237.known	chrX	-	683	2	FSM	ENSG00000068366.21	ENST00000504383.1	683	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGCTCACTGCAACCTC	NA	False	NA	NA	False	NA	NA	NA	109733275	109695650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_109696197_109733138
transcript_148238.nnic	chrX	-	1051	2	NNC	ENSG00000068366.21	novel	464	3	NA	NA	9490	544	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCAAGACTCTTCTCTCAGA	NA	False	NA	-3	True	AATAAA	-18	NA	109625196	109623699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_109624322_109624767
transcript_148240.known	chrX	+	5570	7	FSM	ENSG00000157600.12	ENST00000372068.7	5570	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.15320827791344	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTCCTGGCCTTGC	110002532	True	NA	13	True	ATTAAA	-14	NA	110003113	110177788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_110003179_110003500_110004165_110067346_110067397_110109079_110109147_110144797_110144877_110171419_110171521_110173244
transcript_148241.known	chrX	-	5350	6	FSM	ENSG00000101935.12	ENST00000262844.10	5350	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	12.0731106182293	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATCATTTTATGTTTCTT	NA	False	NA	-6	True	AATAAA	-14	NA	110318085	110194185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110264488_110264600_110317598
transcript_148243.known	chrX	-	3052	5	FSM	ENSG00000101935.12	ENST00000372059.6	3052	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.292877650971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGGTAAATAAAACAAGCAA	NA	False	NA	NA	False	AAAAAG	-7	NA	110318084	110196371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110198635_110200953_110201051_110202445_110202537_110216517_110216633_110317598
transcript_148244.nic	chrX	-	675	2	ISM	ENSG00000101935.12	ENST00000473662.1	418	3	-329	44947	-15	44723	5prime_fragment	FALSE	canonical	3	90	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATACTTTAACTCCTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	110318100	110264426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_110264600_110317598
transcript_148245.known	chrX	-	546	2	FSM	ENSG00000101935.12	ENST00000496695.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTAGTGTGTTTCTTTTCT	NA	False	NA	0	True	AATAAA	-18	NA	110317756	110309149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_110309538_110317598
transcript_148254.known	chrX	+	2477	15	FSM	ENSG00000077264.16	ENST00000425146.5	2477	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.17596201077367	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGCAAAAAAA	NA	False	NA	NA	False	AAAAAG	-19	NA	110944284	111220918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_110944629_111123076_111123279_111142095_111142197_111147736_111147891_111152409_111152448_111162914_111163047_111163561_111163728_111173017_111173082_111192126_111192176_111192505_111192619_111194300_111194419_111195841_111195942_111196443_111196641_111216420_111216559_111220357
transcript_148257.known	chrX	-	3532	13	FSM	ENSG00000077274.9	ENST00000324068.2	3532	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_12	5.79451368873082	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCTTGACTTGAATTGA	NA	False	NA	-2	True	AATAAA	-21	NA	111270483	111245098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_111246760_111247367_111247505_111247870_111247993_111248568_111248772_111248934_111249058_111250916_111251104_111251208_111251287_111251548_111251743_111252306_111252500_111253007_111253217_111254271_111254404_111263771_111263952_111270370
transcript_148258.known	chrX	-	2476	7	FSM	ENSG00000077279.20	ENST00000488120.2	2476	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTAGTTTAGAAATTAT	NA	False	NA	NA	False	AAAAAG	-9	NA	111412429	111300607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_111301744_111312641_111312737_111330918_111331042_111333050_111333154_111400989_111401331_111410034_111410421_111412137
transcript_14826.known	chr1	+	607	4	FSM	ENSG00000163041.13	ENST00000666609.1	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2557.96677069895	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATTTCTCTTCTTCC	226062674	True	NA	NA	False	NA	NA	NA	226063465	226071521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226063597_226064328_226064480_226065655_226065810_226071350
transcript_148260.known	chrX	+	4113	27	FSM	ENSG00000101901.12	ENST00000394780.8	4113	27	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_23	13.5327785275071	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGTGGGATTTTTTCTTTT	111678586	True	NA	14	True	AATAAA	-25	NA	111681169	111760649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111708026_111708394_111708964_111709049_111711674_111711726_111712483_111712531_111713224_111713298_111717845_111717928_111718111_111718275_111720094_111720171_111721602_111721712_111722792_111722858_111723797_111723899_111724933_111725062_111726808_111727056_111727331_111727446_111727613_111727771_111728184_111728306_111730394_111730428_111730524_111730581_111735050_111735123_111736713_111736880_111744667_111744905_111752789_111752831_111757587_111757763_111759733
transcript_148264.known	chrX	+	693	5	FSM	ENSG00000101901.12	ENST00000473389.5	693	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	34.1833292702744	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATAGGAAATTTTATGTT	111678605	True	NA	10	True	AATAAA	-19	NA	111681188	111688128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682131_111682295_111684964_111685104_111686136_111686175_111687886
transcript_148267.known	chrX	+	1098	5	FSM	ENSG00000101901.12	ENST00000492038.5	1098	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	36.1005540123694	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAAGGACTTATACCAA	111678610	True	NA	NA	False	NA	NA	NA	111681193	111688642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682235_111682295_111684964_111685104_111686136_111686175_111687886
transcript_148281.known	chrX	+	585	4	FSM	ENSG00000101901.12	ENST00000623255.1	585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.2910046630673	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAATTAATAAACTTCCTA	111678650	True	NA	-21	True	ATTAAA	-36	NA	111681233	111688097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681300_111682131_111682301_111684964_111685104_111687886
transcript_148286.nic	chrX	+	1294	4	NIC	ENSG00000101901.12	novel	2770	4	NA	NA	0	158	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.8854278742681	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGTTTTAAAATTGAC	111681107	False	NA	6	True	AATAAA	-23	NA	111681117	111688800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_111681300_111682235_111682295_111684964_111685104_111687886
transcript_148287.known	chrX	+	785	4	FSM	ENSG00000101901.12	ENST00000489033.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	20.2703943940144	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAGTGAGCATTCACA	111678632	True	NA	101	True	NA	NA	NA	111681215	111688219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681425_111682131_111682236_111684964_111685104_111687886
transcript_148288.known	chrX	+	916	4	FSM	ENSG00000101901.12	ENST00000468657.5	916	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	31.0590834807897	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTGGAATTGGAATC	111678595	True	NA	NA	False	NA	NA	NA	111681178	111688254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681425_111682131_111682295_111684964_111685104_111687886
transcript_148291.known	chrX	+	679	4	FSM	ENSG00000101901.12	ENST00000482374.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	33.8854278742681	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAATTTTATGTTGTGCAC	111678608	True	NA	16	True	AATAAA	-25	NA	111681191	111688134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681425_111682235_111682295_111684964_111685104_111687886
transcript_148294.known	chrX	+	620	4	FSM	ENSG00000101901.12	ENST00000482742.5	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	36.3715395452116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACCTATGTAATGTGATTA	111681162	True	NA	24	True	AATAAA	-39	NA	111681662	111688040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681827_111682131_111682295_111684964_111685104_111687886
transcript_148297.known	chrX	+	458	4	FSM	ENSG00000101901.12	ENST00000623189.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	38.4794317352357	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGAAATTTTATGTTGTGC	111681796	False	NA	14	True	AATAAA	-23	NA	111681812	111688132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_111681827_111682235_111682295_111684964_111685104_111687886
transcript_14830.known	chr1	+	895	4	FSM	ENSG00000163041.13	ENST00000661429.1	895	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2570.68239967523	553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTTTATAATAATTATAAATA	226062702	True	NA	NA	False	NA	NA	NA	226063493	226071752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226063682_226064328_226064480_226065655_226065810_226071350
transcript_148302.nnic	chrX	-	1743	5	NNC	ENSG00000182508.14	novel	1559	4	NA	NA	-39053	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	2.58602010819715	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	NA	False	NA	NA	False	AATAAA	-26	NA	112719107	112630647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_112631602_112660626_112660726_112671008_112671405_112716304_112716446_112718954
transcript_148309.known	chrX	-	1559	4	FSM	ENSG00000182508.14	ENST00000371968.8	1559	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.54606056566195	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	NA	False	NA	NA	False	AATAAA	-26	NA	112679938	112630647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_112631602_112660626_112660726_112671008_112671405_112679828
transcript_148320.known	chrX	-	629	3	FSM	ENSG00000182508.14	ENST00000478229.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTTAAGCCAGTAGGT	NA	False	NA	NA	False	TTTAAA	-22	NA	112680054	112631273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_112631602_112648638_112648714_112679828
transcript_148321.nnic	chrX	-	1248	3	NNC	ENSG00000182508.14	novel	1559	4	NA	NA	-39053	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTTCTGCTAGATACT	NA	False	NA	NA	False	AATAAA	-26	NA	112719107	112630647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_112631602_112716304_112716446_112718954
transcript_148341.nnic	chrX	-	529	4	NNC	ENSG00000241743.4	novel	347561	2	NA	NA	-22	-150076	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.3137084989848	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGCATTTTCAAGAT	NA	False	NA	NA	False	ATTAAA	-20	NA	113991998	113766375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_113766461_113769510_113769625_113963552_113963600_113991715
transcript_148344.nnic	chrX	-	601	4	NNC	ENSG00000241743.4	novel	347561	2	NA	NA	-22	-169783	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.84321537348893	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATGTTTCTGGTACTCT	NA	False	NA	NA	False	AATAAA	-17	NA	113991998	113786082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_113786226_113938192_113938321_113963552_113963600_113991715
transcript_148359.known	chrX	-	347561	2	FSM	ENSG00000241743.4	ENST00000674361.1	347561	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTTTTTGTTGGTTTCAG	NA	False	NA	NA	False	AATAAA	-19	NA	113991976	113616299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_113963600_113991715
transcript_148377.known	chrX	+	811	3	FSM	ENSG00000288595.1	ENST00000674257.1	811	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	14.5	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGCCTCGGTCTCTTT	114034423	True	NA	18	True	AATAAA	-18	NA	114040387	114050858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_114040637_114042335_114042534_114050494
transcript_148380.known	chrX	+	503	3	FSM	ENSG00000288595.1	ENST00000674440.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	17.5	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCCAGGAACTATTGCAGAA	114034495	False	NA	NA	False	NA	NA	NA	114040459	114055778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_114040637_114042335_114042534_114055650
transcript_148396.nnic	chrX	-	1548	3	NNC	ENSG00000289287.1	novel	1603	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	17	154	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606898	114594405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_114595599_114604483_114604586_114606645
transcript_148398.nnic	chrX	-	1603	3	FSM	ENSG00000289287.1	ENST00000688187.1	1603	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	30.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606896	114594405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_114595599_114604483_114604643_114606645
transcript_1484.known	chr1	+	567	4	FSM	ENSG00000171735.19	ENST00000473578.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	4330	junction_1	571.412868831869	7378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTTAAAATTTAAGTTT	6762005	True	NA	34	True	AATAAA	-19	NA	6785479	6872038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6871756
transcript_148400.nnic	chrX	-	1777	3	FSM	ENSG00000289287.1	ENST00000692140.1	930	3	-45	-802	-45	0	multi-exon	FALSE	canonical	3	54	junction_2	9.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTACACCCATCTCTC	NA	False	NA	-13	True	ATTAAA	-18	NA	114606941	114594405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_114595599_114604483_114604772_114606645
transcript_148405.nnic	chrX	-	900	3	NNC	ENSG00000289287.1	novel	1603	3	NA	NA	-150	6	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_2	17	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGGTTTGTTTGAATC	NA	False	NA	-16	True	AATAAA	-24	NA	114607046	114595201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_114595599_114604483_114604586_114606645
transcript_148408.nnic	chrX	-	981	3	FSM	ENSG00000289287.1	ENST00000692140.1	930	3	-45	-6	-45	6	multi-exon	FALSE	canonical	3	54	junction_2	9.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGGTTTGTTTGAATC	NA	False	NA	-16	True	AATAAA	-24	NA	114606941	114595201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_114595599_114604483_114604772_114606645
transcript_148413.known	chrX	-	4953	21	FSM	ENSG00000130224.15	ENST00000317135.13	4953	21	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_13	4.23408785926792	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTCTGGTATTTCTTT	NA	False	NA	NA	False	GATAAA	-15	NA	115234096	115110615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_115113336_115122526_115122605_115122759_115122898_115123079_115123193_115123944_115124003_115126842_115126894_115130154_115130200_115149826_115149944_115150021_115150071_115156601_115156668_115163675_115163784_115165404_115165464_115165557_115165656_115165840_115165953_115166254_115166343_115170298_115170433_115179426_115179564_115179645_115179752_115184410_115184538_115188225_115188371_115233692
transcript_148419.known	chrX	+	3288	16	FSM	ENSG00000102024.19	ENST00000355899.8	3288	16	0	0	0	0	multi-exon	TRUE	canonical	3	933	junction_8	73.7697920711603	330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTATCCAGTTCCTGC	115552978	True	NA	20	True	AGTAAA	-25	NA	115561173	115650861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_115561261_115610242_115610324_115622245_115622410_115629197_115629328_115629834_115629968_115633999_115634082_115634880_115635047_115636835_115636979_115640407_115640504_115643312_115643509_115645020_115645100_115646071_115646187_115646401_115646536_115647549_115647674_115647892_115648018_115649428
transcript_148430.known	chrX	+	444	3	FSM	ENSG00000229335.2	ENST00000451869.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	6.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	115839416	True	NA	NA	False	NA	NA	NA	115840963	115843048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_115841079_115842643_115842764_115842839
transcript_148431.known	chrX	+	280	2	FSM	ENSG00000229335.2	ENST00000415394.1	280	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATGTGTTCTTATTA	115839462	True	NA	NA	False	NA	NA	NA	115841009	115843050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_115841079_115842839
transcript_148432.nic	chrX	+	315	2	ISM	ENSG00000229335.2	ENST00000451869.1	444	3	-65	270	0	-270	5prime_fragment	FALSE	canonical	3	33	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGATAGTTTTTGGTTAT	115839351	True	NA	NA	False	NA	NA	NA	115840898	115842778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_115841079_115842643
transcript_148433.nic	chrX	+	585	2	ISM	ENSG00000229335.2	ENST00000451869.1	444	3	-65	0	0	0	intron_retention	FALSE	canonical	3	33	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTATGTGTTCTTAT	115839351	True	NA	NA	False	NA	NA	NA	115840898	115843048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_115841079_115842643
transcript_148434.known	chrX	-	517	2	FSM	ENSG00000204019.5	ENST00000371894.5	517	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGATTGTGTGTTTA	NA	False	NA	NA	False	ATTAAA	-16	NA	116462976	116461685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_116462008_116462781
transcript_148435.known	chrX	-	3322	7	FSM	ENSG00000003096.14	ENST00000545703.5	3322	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	8.47381587925744	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGTCTGAGACATCCC	NA	False	NA	-20	True	AATAAA	-14	NA	118116865	117897813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_117899396_117901832_117901947_117909300_117910097_117919520_117919718_117920237_117920371_117945433_117945576_118116507
transcript_148436.known	chrX	+	4114	20	FSM	ENSG00000131725.14	ENST00000254029.8	4114	20	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_4	23.606187272881	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGACTTTATTTTTAATTG	118344321	True	NA	30	True	ATTAAA	-40	NA	118346105	118449961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118346581_118378418_118378453_118387339_118387415_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118441367_118441560_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_14844.known	chr1	+	600	3	FSM	ENSG00000163041.13	ENST00000656829.1	600	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2656	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAATGGTGTTTGTAGCAT	225971764	False	NA	NA	False	AGTAAA	-18	NA	226062782	226071846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062812_226065734_226065810_226071350
transcript_148444.known	chrX	+	1041	3	FSM	ENSG00000131725.14	ENST00000493448.1	1041	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	52	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAAAAGGAAAAGCGAAT	118344414	True	NA	NA	False	NA	NA	NA	118346198	118393215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118346581_118387339_118387415_118392631
transcript_148445.nic	chrX	+	978	2	ISM	ENSG00000131725.14	ENST00000371822.9	3877	18	-4	71074	-4	-14331	5prime_fragment	FALSE	canonical	3	138	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAAAATTATCCAGGT	118344284	True	NA	NA	False	ACTAAA	-11	NA	118346068	118378884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_118346581_118378418
transcript_148446.known	chrX	+	3877	18	FSM	ENSG00000131725.14	ENST00000371822.9	3877	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_13	47.8889285844741	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATGACTTTATTTTTAA	118344288	True	NA	27	True	ATTAAA	-37	NA	118346072	118449958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118346581_118378418_118378453_118392631_118393272_118394054_118394186_118395248_118395345_118396969_118397107_118398386_118398471_118404337_118404445_118406874_118407027_118409488_118409628_118410894_118410960_118432780_118432895_118436701_118436825_118442243_118442346_118442564_118442681_118443559_118443688_118444359_118444495_118448892
transcript_148447.known	chrX	+	3996	11	FSM	ENSG00000131724.11	ENST00000371666.8	3996	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	11.6034477634882	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAATGTTTTCCTTTGGT	118726530	True	NA	9	True	AATAAA	-21	NA	118727605	118794533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118727727_118741016_118741157_118746953_118747093_118749657_118749779_118758054_118758243_118761137_118761290_118766529_118766578_118766843_118766977_118773878_118773976_118776426_118776512_118791761
transcript_148448.known	chrX	+	2197	4	FSM	ENSG00000174460.4	ENST00000310164.3	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.29983164553722	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTTAATGTGTCTGTG	118823713	True	NA	8	True	AATAAA	-15	NA	118823823	118826968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_118824006_118824338_118824391_118824588_118824714_118825130
transcript_148449.nnic	chrX	+	1739	3	NNC	ENSG00000101856.10	novel	1762	2	NA	NA	710	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	637.5	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	119236823	False	NA	16	True	AATAAA	-18	NA	119236994	119244466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_119237262_119240308_119240465_119243150
transcript_14845.known	chr1	-	1264	3	FSM	ENSG00000272562.2	ENST00000658138.1	1264	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAGTATGAGAATAATAA	-226061883	False	NA	NA	False	NA	NA	NA	226061898	226045560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226046591_226060989_226061082_226061756
transcript_148450.known	chrX	+	1879	3	FSM	ENSG00000101856.10	ENST00000217971.8	1879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1227	junction_1	25	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTGGTGACTTATTTAA	119214749	True	NA	16	True	AATAAA	-18	NA	119236284	119244466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119236692_119240308_119240465_119243150
transcript_148452.nnic	chrX	-	538	2	NNC	ENSG00000214992.6	novel	2719	4	NA	NA	-16066	-5418	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAGAGAAGAGGA	NA	False	NA	NA	False	AAGAAA	-9	NA	119273733	119254763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_119254863_119273294
transcript_148462.known	chrX	+	775	4	FSM	ENSG00000005022.6	ENST00000460013.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_1	3377.69033512547	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGCTCGTGATGAAGGAG	119469256	False	NA	NA	False	NA	NA	NA	119469276	119470940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119469384_119469660_119470148_119470372_119470514_119470900
transcript_148464.known	chrX	-	1874	2	FSM	ENSG00000224281.5	ENST00000446986.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTACTATTTTTGCA	NA	False	NA	-8	True	AATAAA	-13	NA	119468262	119466033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119467751_119468105
transcript_148468.known	chrX	+	1307	4	FSM	ENSG00000005022.6	ENST00000317881.9	1307	4	0	0	0	0	multi-exon	FALSE	canonical	3	7057	junction_3	401.07300526906	13078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTACATTTTTAATAAATG	119430985	True	NA	-32	True	AATAAA	-19	NA	119468443	119471396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119468627_119469660_119470148_119470372_119470514_119470900
transcript_148474.known	chrX	+	1771	6	FSM	ENSG00000077721.16	ENST00000630695.2	1771	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	236.12454340877	245	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGGTATCTTTTTTTTT	119569140	True	NA	19	True	AATAAA	-21	NA	119574562	119584425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119574756_119574907_119574982_119575374_119575401_119581506_119581597_119582587_119582677_119583126
transcript_148477.known	chrX	-	4495	11	FSM	ENSG00000125354.24	ENST00000394610.7	4495	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	46.6801885171857	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693168	119616944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119620052_119625334_119625380_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_14848.known	chr1	+	559	4	FSM	ENSG00000163041.13	ENST00000667897.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	2401.73664020202	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTGGTAGTTCTGAACG	225971739	False	NA	NA	False	NA	NA	NA	226062757	226071542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226062812_226064328_226064480_226065655_226065818_226071350
transcript_148480.known	chrX	-	1576	10	FSM	ENSG00000125354.24	ENST00000354228.8	1576	10	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	84.1917271089045	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGTCTAAAGGAGAAGACT	NA	False	NA	NA	False	NA	NA	NA	119693370	119616711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119616743_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_148481.known	chrX	-	2693	10	FSM	ENSG00000125354.24	ENST00000343984.5	2693	10	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	79.6596153705731	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACGAGGTCTTTTGATGTT	NA	False	NA	NA	False	NA	NA	NA	119693370	119617638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119618787_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_148483.known	chrX	-	4652	10	FSM	ENSG00000125354.24	ENST00000354416.7	4652	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	81.7720408615724	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGTGTGGTGTTCTTAA	NA	False	NA	-4	True	ATTAAA	-16	NA	119693370	119616944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119620052_119629317_119629509_119633359_119633493_119637026_119637196_119640691_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_148487.nic	chrX	-	1423	6	ISM	ENSG00000125354.24	ENST00000343984.5	2693	10	143	22539	-59	-11362	5prime_fragment	FALSE	canonical	3	252	junction_1	28.2588039378881	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGACTGGATAGT	NA	False	NA	NA	False	AATACA	-15	NA	119693227	119640177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_119640789_119649936_119650099_119652853_119653041_119663481_119663678_119675553_119675669_119693075
transcript_14849.known	chr1	+	1308	3	FSM	ENSG00000163041.13	ENST00000366813.1	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	5312	junction_2	138	5089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGCTTTTGGTCTTTATT	226063185	False	NA	NA	False	ATTAAA	-15	NA	226063976	226072001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226064480_226065655_226065810_226071350
transcript_148490.known	chrX	-	1061	4	FSM	ENSG00000125354.24	ENST00000467310.1	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	105.480909278515	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGATAGCCTTACCGAAT	NA	False	NA	-13	True	AATAAA	-30	NA	119633424	119619308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119620052_119625334_119625397_119629317_119629509_119633359
transcript_148491.known	chrX	+	2492	1	FSM	ENSG00000279601.1	ENST00000625181.1	2492	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGATCATGCCTTTCTT	119693550	True	NA	1	True	AATAAA	-16	NA	119693567	119696059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119693600_119696100
transcript_1485.known	chr1	+	486	4	FSM	ENSG00000171735.19	ENST00000557126.5	486	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	2079.29908061988	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAATAGAATAAAGTGAC	6762016	True	NA	NA	False	ACTAAA	-2	NA	6785490	6887865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_6887653
transcript_14850.nic	chr1	+	558	4	NIC	ENSG00000225518.3	novel	1110	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTATTGCTTTATTAA	226083498	True	NA	NA	False	ATTAAA	-18	NA	226083574	226090292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_226083642_226086795_226087054_226089489_226089655_226090224
transcript_148500.known	chrX	-	390	3	FSM	ENSG00000198918.8	ENST00000361575.4	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	9679	junction_2	667	61635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATTGTGGTTT	NA	False	NA	-9	True	AATAAA	-23	NA	119791630	119786503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119786733_119789907_119790012_119791573
transcript_148501.known	chrX	-	1915	2	FSM	ENSG00000198918.8	ENST00000468844.1	1915	2	0	0	0	0	multi-exon	FALSE	canonical	3	11013	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGCTGTTGTATTGTGGT	NA	False	NA	-11	True	AATAAA	-21	NA	119791595	119786505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119786733_119789907
transcript_148502.known	chrX	-	2343	11	FSM	ENSG00000125351.13	ENST00000276201.7	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	84.8693702109306	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGTGTGTTTATTAACT	NA	False	NA	-2	True	AATAAA	-24	NA	119852963	119834021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119840645_119840685_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_148503.known	chrX	-	2335	10	FSM	ENSG00000125351.13	ENST00000345865.6	2335	10	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	30.0185128064518	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGCTAAGTGTGTTTATT	NA	False	NA	-6	True	AATAAA	-20	NA	119852998	119834025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119835028_119837756_119838052_119838366_119838528_119841075_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_148509.nic	chrX	-	842	7	ISM	ENSG00000125351.13	ENST00000345865.6	2335	10	-87	7172	-87	-2932	5prime_fragment	FALSE	canonical	3	206	junction_2	31.0559530882925	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGAAGAGAGGAGGAAA	NA	False	NA	-30	True	AATAGA	-15	NA	119853085	119841197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_119841259_119841734_119841779_119843190_119843302_119845197_119845297_119851494_119851602_119851766_119851874_119852772
transcript_148514.nnic	chrX	+	1172	4	NNC	ENSG00000286366.1	novel	2006	2	NA	NA	-289	-11056	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	4.54606056566195	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTCATGTGTCCCAAAATA	NA	False	NA	9	True	AATAGA	-2	NA	119791681	119799893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_119792018_119798722_119798989_119799202_119799321_119799441
transcript_148524.known	chrX	+	2006	2	FSM	ENSG00000286366.1	ENST00000654639.1	2006	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATCATTGCCTACAAAAG	119791867	True	NA	NA	False	AATAAA	-14	NA	119791970	119810949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119792018_119808990
transcript_148525.known	chrX	-	1259	1	FSM	ENSG00000125352.6	ENST00000371442.4	1259	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	704	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCCTGGATTAAAAGC	NA	False	NA	52	True	NA	NA	NA	119871733	119870474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119870500_119871700
transcript_14853.known	chr1	-	3584	8	FSM	ENSG00000182827.9	ENST00000366812.6	3584	8	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_5	31.9195417081314	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTGATGTTTCATTAAT	-226179315	True	NA	0	True	ATTAAA	-15	NA	226186741	226144678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226146822_226152334_226152620_226154646_226154834_226159183_226159359_226161530_226161690_226164788_226164930_226165858_226166001_226186389
transcript_148539.known	chrX	+	421	3	FSM	ENSG00000125356.7	ENST00000371437.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	3633	junction_2	17.5	49991	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTCTTTTTTTTAAAT	119860616	True	NA	6	True	AATAAA	-17	NA	119871831	119876662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119872014_119873303_119873394_119876513
transcript_148541.known	chrX	-	1394	9	FSM	ENSG00000101882.10	ENST00000652253.1	1394	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_6	59.0591599584688	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTATTGATATAACTTTA	NA	False	NA	-20	True	AATAAA	-5	NA	119943604	119925069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_119925395_119930015_119930166_119931935_119932012_119932106_119932217_119934493_119934558_119936296_119936429_119936611_119936683_119938729_119938811_119943219
transcript_148542.nic	chrX	+	910	6	ISM	ENSG00000186471.13	ENST00000371431.8	921	7	178	0	-122	0	3prime_fragment	FALSE	canonical	1	1	junction_3	6.08604962188118	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTGTATTTTTTTGCA	119896011	True	NA	3	True	AATAAA	-15	NA	119896070	119920716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_119896268_119903213_119903393_119903494_119903587_119914698_119914879_119919910_119919964_119920507
transcript_148543.known	chrX	+	608	5	FSM	ENSG00000186471.13	ENST00000334356.2	608	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	6.57647321898295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCTGTATTTTTTTGCA	119896133	True	NA	3	True	AATAAA	-15	NA	119896192	119920716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119896268_119903213_119903393_119903494_119903587_119919910_119919964_119920507
transcript_148544.nic	chrX	-	895	5	ISM	ENSG00000101882.10	ENST00000371410.5	5942	9	-36	13846	-36	-4393	5prime_fragment	FALSE	canonical	3	130	junction_3	13.7727085208393	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAGAAGAAGAAACACA	NA	False	NA	-25	True	AAGAAA	-12	NA	119943787	119934517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_119934558_119936296_119936432_119936611_119936683_119938729_119938811_119943219
transcript_148545.known	chrX	+	412	3	FSM	ENSG00000186471.13	ENST00000371422.5	412	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCAAAAGTTTGAAGTCTGG	119896133	True	NA	3	True	AATAAA	-15	NA	119896192	119903652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_119896268_119903213_119903393_119903494
transcript_148547.known	chrX	-	501	3	FSM	ENSG00000234493.4	ENST00000635473.2	501	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTCTGAAACCTGCCTCA	NA	False	NA	NA	False	NA	NA	NA	120015407	120013372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120013455_120014780_120015115_120015322
transcript_148548.known	chrX	-	1257	4	FSM	ENSG00000203989.5	ENST00000371402.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACGGACTCTCGTCTCA	NA	False	NA	NA	False	AATAAA	-30	NA	120077690	120072263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120072846_120075899_120075946_120076876_120077289_120077473
transcript_148550.known	chrX	-	2384	3	FSM	ENSG00000233382.8	ENST00000452254.3	2424	3	40	0	10	0	multi-exon	FALSE	canonical	3	10	junction_1	6	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAATGGTGCACTGACTT	NA	False	NA	NA	False	AATAAA	-14	NA	120245233	120236457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120238243_120240226_120240356_120244763
transcript_148551.known	chrX	-	1074	2	FSM	ENSG00000233382.8	ENST00000650818.1	1074	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTTTAGAAGTTACTT	NA	False	NA	NA	False	AATAAA	-16	NA	120245211	120240395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120241022_120244763
transcript_148552.known	chrX	+	5211	2	FSM	ENSG00000177485.7	ENST00000326624.2	5211	2	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGAGTGCGTGTTTTAC	120250620	False	NA	9	True	AATAAA	-16	NA	120250751	120258398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120250978_120253413
transcript_148553.known	chrX	-	6535	9	FSM	ENSG00000005893.16	ENST00000200639.9	6535	9	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_1	81.2757651455832	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGATAACCTCATTTTT	NA	False	NA	-6	True	AATAAA	-20	NA	120469296	120426147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120431463_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_148558.known	chrX	-	4030	9	FSM	ENSG00000005893.16	ENST00000371335.4	4030	9	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	102.232272301852	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTACCTTTTTTCCCG	NA	False	NA	0	True	AATAAA	-24	NA	120469306	120436493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120439294_120441729_120441895_120442598_120442663_120446304_120446428_120447840_120448026_120448969_120449129_120455356_120455571_120456650_120456770_120469105
transcript_148564.known	chrX	-	4906	21	FSM	ENSG00000158290.19	ENST00000336592.11	4906	21	0	0	0	0	multi-exon	FALSE	non_canonical	3	52	junction_20	30.010164944565	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120561453	120524611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082_120560626_120561371
transcript_148567.known	chrX	-	5097	20	FSM	ENSG00000158290.19	ENST00000674137.11	5097	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	12	junction_6	36.5324581518266	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCCTGTGTACGTG	NA	False	NA	-71	True	NA	NA	NA	120560953	120524672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538117_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120560082
transcript_148569.known	chrX	-	4418	20	FSM	ENSG00000158290.19	ENST00000371323.3	4418	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	23	junction_19	35.8554345722605	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCTAGAGAAGATCTTTA	NA	False	NA	-10	True	AATAAA	-18	NA	120559915	120524611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120526857_120530101_120530255_120532421_120532595_120534480_120534587_120535829_120535944_120536926_120537035_120538123_120538210_120538659_120538771_120539267_120539373_120540369_120540563_120541601_120541721_120542965_120543034_120543726_120543810_120544113_120544204_120544480_120544644_120545443_120545518_120546546_120546617_120547135_120547240_120557923_120558040_120559778
transcript_14857.known	chr1	+	1965	2	FSM	ENSG00000185155.12	ENST00000366810.6	1965	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTTCTATTTAAATGA	226222622	True	NA	16	True	ATTAAA	-22	NA	226223663	226227060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226224075_226225506
transcript_148579.known	chrX	+	9577	6	FSM	ENSG00000232119.8	ENST00000371317.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	19.4010309004444	3550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACCTGTGTCTTTACTT	120600828	True	NA	NA	False	AATAAA	-19	NA	120604100	120621159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120604248_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_148580.known	chrX	+	1130	6	FSM	ENSG00000232119.8	ENST00000371315.3	1130	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	152.241124536046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTGTGTCTGTGTGTG	120604308	False	NA	-57	True	NA	NA	NA	120604320	120612312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_120604868_120605406_120605560_120606078_120606177_120608224_120608359_120611010_120611079_120612182
transcript_148588.known	chrX	-	1024	3	FSM	ENSG00000158290.19	ENST00000486604.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGTGTGTAAGAACTA	NA	False	NA	NA	False	AATAAA	-15	NA	120575524	120571175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120572001_120574550_120574631_120575405
transcript_14859.known	chr1	+	784	2	FSM	ENSG00000185155.12	ENST00000557734.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTGGGCCAGGTGCAG	226225477	False	NA	NA	False	NA	NA	NA	226225502	226226389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226225648_226225750
transcript_148590.known	chrX	-	1636	2	FSM	ENSG00000171155.8	ENST00000304661.6	1636	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCCTGAGAAAAAAAACTGA	NA	False	NA	-19	True	ATTAAA	-18	NA	120630054	120625673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120627172_120629916
transcript_148594.known	chrX	-	1492	3	FSM	ENSG00000171155.8	ENST00000371313.2	1492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTATGAACATTAGAAATCT	NA	False	NA	-29	True	AATAAA	-34	NA	120629995	120625930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120627172_120627255_120627428_120629916
transcript_148595.known	chrX	-	1298	3	FSM	ENSG00000224089.3	ENST00000430448.3	1298	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGGAAGATTTTTCAATA	NA	False	NA	NA	False	AATAAA	-28	NA	120942023	120938700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120938842_120939979_120940136_120941022
transcript_148596.known	chrX	-	1298	3	FSM	ENSG00000236126.3	ENST00000441330.3	1298	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGGGAAGATTTTTCAATA	NA	False	NA	NA	False	AATAAA	-28	NA	120976068	120972745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_120972887_120974024_120974181_120975067
transcript_148597.nnic	chrX	+	1126	6	Genic_Genomic	ENSG00000280142.1	novel	609	1	NA	NA	-19658	-223	multi-exon	FALSE	non_canonical	0	0	junction_5	46.0304247210473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGTCTCAAAATATTA	122217683	True	NA	9	True	AATAAA	-21	NA	122222349	122242393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122238600_122238964_122242184
transcript_148601.nnic	chrX	+	851	5	Intergenic	novelGene_77	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_2	40.4065279379459	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	122217669	True	NA	19	True	AGTAAA	-19	NA	122222335	122248544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_122222603_122227324_122227431_122229771_122229895_122230631_122230758_122248315
transcript_148602.nnic	chrX	+	972	5	Intergenic	novelGene_76	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_4	36.6776498701866	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTGTGTATTATTTG	NA	False	NA	19	True	AGTAAA	-19	NA	122222160	122248544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_+_122222603_122227324_122227431_122229825_122229895_122230631_122230758_122248315
transcript_148608.known	chrX	+	609	1	FSM	ENSG00000280142.1	ENST00000624911.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAACTTATTGCCCTTGT	122241991	False	NA	NA	False	AATAAA	-22	NA	122242007	122242616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_122242000_122242600
transcript_148609.nic	chrX	+	2494	11	ISM	ENSG00000125675.20	ENST00000620581.4	2991	17	-129	70635	-36	56778	5prime_fragment	FALSE	canonical	1	2	junction_5	9.67677632272236	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGTTTCCTAATTAATTG	123183568	True	NA	NA	False	AGTAAA	-28	NA	123184241	123418101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123184645_123185831_123185991_123253302_123253543_123326025_123326214_123354909_123354964_123394967_123395130_123398635_123398804_123402993_123403099_123403411_123403520_123404707_123404915_123417401
transcript_14861.known	chr1	-	2998	15	FSM	ENSG00000183814.16	ENST00000681046.1	2998	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	21.2559715499107	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-226307503	True	NA	0	True	AATAAA	-18	NA	226309164	226231156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_14862.known	chr1	-	3186	15	FSM	ENSG00000183814.16	ENST00000366808.6	3186	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_14	36.3936106749411	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTCTATATTTTCATT	-226309846	False	NA	0	True	AATAAA	-18	NA	226309869	226231156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309625
transcript_148622.known	chrX	+	936	4	FSM	ENSG00000125675.20	ENST00000611689.4	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	12.0830459735946	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	123183625	True	NA	11	True	AATAAA	-24	NA	123184298	123204683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123184645_123185831_123185991_123202635_123202783_123204399
transcript_148624.nic	chrX	+	1161	4	ISM	ENSG00000125675.20	ENST00000620581.4	2991	17	-129	162352	-36	-34939	5prime_fragment	FALSE	canonical	2	7	junction_3	11.8602979164381	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAGAAAGAAAGAAAAGAGAA	123183568	True	NA	NA	False	NA	NA	NA	123184241	123326384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_123184645_123185831_123185991_123253302_123253543_123326025
transcript_148633.known	chrX	+	644	3	FSM	ENSG00000125675.20	ENST00000479118.1	644	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTAATTTTAGAACC	123183886	False	NA	59	True	AATAAA	-27	NA	123184559	123253702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123184645_123185831_123185991_123253302
transcript_148640.known	chrX	+	784	5	FSM	ENSG00000125675.20	ENST00000616590.4	784	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	11.8822346383161	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTTCAGTTGTGTGG	123184127	False	NA	11	True	AATAAA	-24	NA	123184152	123204683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123184220_123184517_123184645_123185831_123185991_123202635_123202783_123204399
transcript_148641.known	chrX	-	5600	39	FSM	ENSG00000125676.20	ENST00000245838.13	5600	39	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	55.9499244353496	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGTATATTATTGTGTA	NA	False	NA	-9	True	AATAAA	-17	NA	123733052	123600568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_123601339_123610917_123610964_123611439_123611517_123613398_123613557_123613638_123613709_123614051_123614190_123619400_123619437_123620906_123620966_123621156_123621588_123622757_123622861_123623104_123623284_123623786_123623972_123624059_123624192_123624540_123624670_123625911_123626070_123626520_123626663_123627692_123627969_123631687_123631853_123632860_123633041_123633952_123634071_123636078_123636176_123638042_123638124_123638933_123639028_123640537_123640623_123644574_123644677_123644778_123644910_123645333_123645376_123665641_123665838_123667105_123667279_123668158_123668315_123671668_123671762_123686547_123686715_123696020_123696155_123696720_123696843_123697680_123697752_123703453_123703506_123706857_123706950_123712849_123712909_123732951
transcript_148642.known	chrX	+	8558	7	FSM	ENSG00000101966.13	ENST00000371199.8	8558	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	0.763762615825973	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATACTACCTTGTATTT	123859997	False	NA	NA	False	AATAAA	-34	NA	123860052	123913972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123860294_123885630_123886540_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_148643.known	chrX	+	598	6	FSM	ENSG00000101966.13	ENST00000481776.5	598	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.56070170039655	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAGGAGAAGCTTTGCAAA	123859745	False	NA	NA	False	NA	NA	NA	123859763	123907020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123859906_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_148644.known	chrX	+	533	6	FSM	ENSG00000101966.13	ENST00000497640.1	533	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.77359245282264	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGCAGCTAAGGCGCCT	123860147	True	NA	NA	False	NA	NA	NA	123860194	123906998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123860294_123888618_123888719_123891237_123891317_123892730_123892774_123900492_123900694_123906987
transcript_148648.known	chrX	+	4281	34	FSM	ENSG00000101972.20	ENST00000371144.7	4281	34	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	67.6676369537838	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAACAATCTGAAGAGGCAT	123958377	True	NA	NA	False	TTTAAA	-17	NA	123961738	124100902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_148650.known	chrX	+	5991	33	FSM	ENSG00000101972.20	ENST00000371157.7	5991	33	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	50.8247217773988	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958356	True	NA	NA	False	AATAAA	-22	NA	123961717	124102656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123961857_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124094017_124094145_124095371_124095450_124100573
transcript_14866.known	chr1	-	2909	14	FSM	ENSG00000183814.16	ENST00000460719.5	2909	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_11	33.0606399992463	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTCATTTAATTCAA	-226307511	True	NA	8	True	AATAAA	-26	NA	226309172	226231148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226232607_226233095_226233194_226233343_226233524_226238970_226239097_226250838_226250920_226265532_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_148672.known	chrX	+	6179	35	FSM	ENSG00000101972.20	ENST00000371145.8	6179	35	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	74.5517922197944	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATCCCTAATTGGATTA	123958344	True	NA	NA	False	AATAAA	-22	NA	123961705	124102656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_123961857_124021366_124021432_124022530_124022672_124025839_124025919_124030960_124031126_124037526_124037624_124042568_124042646_124045163_124045369_124047353_124047506_124049004_124049079_124050185_124050310_124051120_124051220_124051314_124051395_124056127_124056236_124057865_124057978_124061223_124061342_124061770_124061875_124062901_124062995_124063115_124063206_124063847_124064052_124065875_124065947_124066174_124066263_124066355_124066437_124068563_124068657_124071148_124071324_124076331_124076472_124077956_124078059_124081379_124081529_124083420_124083550_124086546_124086771_124090574_124090765_124090853_124090965_124094017_124094145_124095371_124095450_124100573
transcript_148675.known	chrX	-	326	2	FSM	ENSG00000232412.1	ENST00000426367.1	326	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCGTTTCTGTTCCATT	NA	False	NA	-3	True	CATAAA	-19	NA	123961341	123959232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_123959406_123961188
transcript_148676.known	chrX	-	84	1	FSM	ENSG00000226532.1	ENST00000412004.1	84	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	110	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAATGTGTTC	NA	False	NA	-48	True	NA	NA	NA	124326258	124326174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_124326200_124326300
transcript_148679.nnic	chrX	+	631	3	NNC	ENSG00000237208.1	novel	639	3	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCTTGTTGCTTAG	126109599	True	NA	NA	False	AATAAA	-32	NA	126109659	126115562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_126109805_126110023_126110149_126115201
transcript_148680.nic	chrX	+	1005	2	NIC	ENSG00000237208.1	novel	639	3	NA	NA	-257	0	intron_retention	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTCCTCTTGTTGCTTAG	NA	False	NA	NA	False	AATAAA	-32	NA	126109504	126115562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_126110149_126115201
transcript_148698.nnic	chrX	+	1321	3	Antisense	novelGene_ENSG00000225689.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTATTTTATAGTTTCATT	NA	False	NA	NA	False	AATAAA	-23	NA	129091313	129139646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_129091448_129096501_129096602_129138559
transcript_148700.known	chrX	-	3989	25	FSM	ENSG00000102038.16	ENST00000371121.5	3989	25	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_13	67.3621921448193	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	129523490	129446505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129493039_129493076_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_148703.known	chrX	-	3948	24	FSM	ENSG00000102038.16	ENST00000371123.5	3948	24	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_12	95.2852646714909	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTATTTCCTGTTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	129523485	129446505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129447234_129448332_129448444_129465519_129465733_129465843_129465963_129468772_129468906_129471203_129471327_129480700_129480815_129481074_129481186_129487017_129487138_129488936_129489086_129490059_129490193_129491940_129492094_129496749_129496872_129497844_129498072_129499731_129499842_129504733_129504803_129506079_129506212_129507940_129508097_129511803_129511984_129515686_129515788_129515893_129515995_129516330_129516498_129518360_129518448_129523196
transcript_148716.known	chrX	-	351	2	FSM	ENSG00000287024.1	ENST00000668487.1	351	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTTGGTATTTTGTT	NA	False	NA	NA	False	AATAAA	-21	NA	129678348	129675887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129676019_129678128
transcript_148719.known	chrX	-	4571	11	FSM	ENSG00000188706.13	ENST00000357166.11	4571	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.944869606397	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCCTCATTTCTTTAC	NA	False	NA	-18	True	AATACA	-21	NA	129843886	129803287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_129806487_129810904_129811002_129811405_129811510_129812717_129812821_129813676_129813726_129814657_129814796_129823678_129823838_129828980_129829142_129841778_129842081_129843258_129843327_129843695
transcript_148728.known	chrX	+	2507	15	FSM	ENSG00000156697.13	ENST00000394422.8	2507	15	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_4	23.0780618505001	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGAGTATATGTTG	129902523	True	NA	6	True	AATAAA	-17	NA	129906163	129929752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129911765_129911922_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_148736.known	chrX	+	2403	14	FSM	ENSG00000156697.13	ENST00000425117.6	2403	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	48.5705733105548	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATGTTGCATTGTCCC	129902480	True	NA	15	True	AATAAA	-26	NA	129906120	129929761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_129906237_129907366_129907443_129908059_129908131_129908669_129908735_129911007_129911151_129919174_129919295_129919394_129919490_129920456_129920581_129920674_129920753_129921193_129921588_129924794_129925196_129925918_129926113_129926239_129926340_129929335
transcript_148738.known	chrX	-	2107	16	FSM	ENSG00000156709.15	ENST00000675240.1	2107	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	134.185675672016	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTGAAATAAATTCTGA	NA	False	NA	NA	False	NA	NA	NA	130165825	130129396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130103_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_148744.known	chrX	-	2048	16	FSM	ENSG00000156709.15	ENST00000676436.1	2048	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	182.581561683174	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATTAAATTCTGTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	130165690	130129372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137180_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147871_130149468_130149569_130156460_130156604_130165550
transcript_148748.known	chrX	-	2154	16	FSM	ENSG00000156709.15	ENST00000675092.1	2154	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	134.894955016446	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTTCTCTTGTCAAGGG	NA	False	NA	NA	False	AATAAA	-22	NA	130165746	130129361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130194_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_148749.known	chrX	-	1883	15	FSM	ENSG00000156709.15	ENST00000674997.1	1883	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	140.440215328917	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATTAAATTCTGTTCT	NA	False	NA	NA	False	AATAAA	-11	NA	130165656	130129372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130140532_130140618_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130165550
transcript_14875.nic	chr1	-	1256	10	ISM	ENSG00000183814.16	ENST00000681046.1	2998	15	-27	34210	-19	22326	5prime_fragment	FALSE	canonical	3	98	junction_6	19.0483465469536	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAAGATCTTTCTTCT	-226309168	False	NA	NA	False	AATAAA	-20	NA	226309191	226265366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226295841_226295947_226297718_226297814_226301172_226301206_226309108
transcript_148751.known	chrX	-	1905	15	FSM	ENSG00000156709.15	ENST00000674722.1	1905	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	139.607978837537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGGTAAATTCTTAAT	NA	False	NA	NA	False	NA	NA	NA	130165669	130129421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130129629_130129969_130130167_130131674_130131800_130133312_130133456_130136044_130136186_130136642_130136732_130137077_130137186_130138592_130138702_130139794_130139872_130145478_130145570_130147492_130147624_130147751_130147877_130149468_130149569_130156460_130156604_130165550
transcript_148758.known	chrX	+	952	1	FSM	ENSG00000286650.1	ENST00000664768.1	952	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTCAGTTTACAATGG	130165905	True	NA	NA	False	ATTAAA	-19	NA	130165953	130166905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130166000_130166900
transcript_148759.known	chrX	+	945	2	FSM	ENSG00000134594.5	ENST00000257017.5	945	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACATGGCTTTTTGTCTTG	130171902	False	NA	5	True	AATAAA	-15	NA	130171961	130184870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130172321_130184284
transcript_148764.known	chrX	-	4638	19	FSM	ENSG00000056277.16	ENST00000370978.9	4638	19	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_8	10.5293534440922	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCATATAACTATAGGAGCAT	NA	False	NA	-6	True	AATAAA	-20	NA	130268899	130202706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130204993_130205116_130205154_130205296_130205416_130209652_130209716_130215192_130215334_130215790_130216102_130220348_130220481_130226758_130226906_130227681_130227783_130228976_130229135_130230509_130230728_130236213_130236321_130236468_130236640_130239581_130239694_130243562_130243700_130243799_130243866_130246858_130247006_130260418_130260466_130268761
transcript_148768.known	chrX	+	1615	11	FSM	ENSG00000102078.16	ENST00000545805.6	1615	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	35.5990168403567	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338392	True	NA	27	True	ATTAAA	-17	NA	130339918	130373357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130339977_130340106_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_148778.nnic	chrX	+	1068	7	NIC	ENSG00000102078.16	novel	1615	11	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	35.9045803330005	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTTGGCTTTGTCTTCA	130338364	True	NA	27	True	ATTAAA	-17	NA	130339890	130373357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_130339977_130349250_130349346_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_148783.known	chrX	+	1403	10	FSM	ENSG00000102078.16	ENST00000543953.5	1403	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	23.7580395749406	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTTGTCTTCATTTA	130338361	True	NA	31	True	ATTAAA	-21	NA	130339887	130373361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130339977_130345181_130345276_130346543_130346692_130349250_130349346_130350645_130350732_130358639_130358736_130364627_130364753_130365540_130365677_130371563_130371645_130372908
transcript_148784.known	chrX	+	1043	9	FSM	ENSG00000102078.16	ENST00000467496.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	27.2462726808641	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGTACATTGTGGATTT	130338607	False	NA	NA	False	TTTAAA	-1	NA	130340133	130365675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130340354_130345181_130345276_130346543_130346692_130349250_130349346_130349823_130349868_130350645_130350732_130358639_130358736_130364627_130364753_130365540
transcript_148786.known	chrX	+	1823	6	FSM	ENSG00000134597.17	ENST00000305536.11	1823	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	21.9872690436989	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGCCTTTTGTGTCTGG	130399194	True	NA	5	True	CATAAA	-16	NA	130401986	130413656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130402038_130402254_130402371_130403801_130403854_130409256_130409387_130411347_130411526_130412360
transcript_148787.known	chrX	+	729	4	FSM	ENSG00000134597.17	ENST00000469953.1	729	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	18.6726180988812	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAGCATTAAGACTTAA	130399208	True	NA	1	True	AAAAAG	-10	NA	130402000	130411524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_130402371_130403801_130403854_130409256_130409387_130411347
transcript_148790.known	chrX	-	5215	16	FSM	ENSG00000165675.19	ENST00000338144.8	5215	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_13	15.551205741035	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	130903209	130622324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130709242_130709332_130783546_130783691_130901683_130901732_130903048
transcript_148791.known	chrX	-	5126	15	FSM	ENSG00000165675.19	ENST00000394363.6	5126	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	6.59506618307835	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAAATGTGTGAGAAGTT	NA	False	NA	NA	False	AATAAA	-21	NA	130903209	130622324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_130625446_130627957_130628044_130631467_130631577_130634983_130635092_130637228_130637411_130656580_130656696_130665642_130665750_130667529_130667743_130669964_130670199_130679541_130679749_130688862_130689019_130703119_130703255_130783546_130783691_130901683_130901732_130903048
transcript_148795.nic	chrX	-	375	3	ISM	ENSG00000165675.19	ENST00000492263.1	819	7	-59	103921	-17	-103921	5prime_fragment	FALSE	canonical	3	40	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAACAAATACTCCTTCAG	NA	False	NA	NA	False	AAGAAA	-6	NA	130903251	130783566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_130783691_130901683_130901732_130903048
transcript_148796.nic	chrX	-	3198	2	ISM	ENSG00000165675.19	ENST00000492263.1	819	7	-59	219091	-17	-219091	5prime_fragment	FALSE	canonical	3	55	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAAGAACATCTTAA	NA	False	NA	NA	False	AAAACA	-17	NA	130903251	130898736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_130901732_130903048
transcript_148799.known	chrX	-	4461	20	FSM	ENSG00000147255.19	ENST00000361420.8	4461	20	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_9	32.9469480383472	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGCTGTGGTCTTCTAT	NA	False	NA	-2	True	AATAAA	-29	NA	131289306	131273505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131273932_131274082_131274207_131274598_131274878_131274998_131275287_131275477_131275766_131275960_131276249_131276938_131277227_131277855_131278135_131278460_131278752_131279142_131279176_131279270_131279342_131281217_131281339_131281665_131281945_131282443_131282738_131282979_131283265_131285178_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_14880.nic	chr1	-	1151	9	ISM	ENSG00000183814.16	ENST00000481685.1	1916	13	63	32654	-19	22326	5prime_fragment	FALSE	canonical	3	27	junction_6	39.2300904918661	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTAAAGATCTTTCTTCT	-226309168	False	NA	NA	False	AATAAA	-20	NA	226309191	226265366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_226265635_226266212_226266333_226267956_226268091_226277774_226277933_226286332_226286459_226287663_226287798_226297718_226297814_226301172_226301206_226309108
transcript_148803.known	chrX	-	1820	5	FSM	ENSG00000147255.19	ENST00000370901.4	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	12.3161479367536	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTAGTATAGCTTTTT	NA	False	NA	-7	True	AATAAA	-14	NA	131289286	131284165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131285467_131285766_131286049_131286436_131286464_131286604_131286742_131289213
transcript_148806.nnic	chrX	+	544	4	Antisense	novelGene_ENSG00000147255.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTGCGACCCAAATAAATC	131250937	True	NA	NA	False	AATAAA	-18	NA	131251085	131283736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_+_131251318_131251462_131251593_131273248_131273318_131283623
transcript_148814.nic	chrX	-	967	3	ISM	ENSG00000147255.19	ENST00000370904.6	5413	27	-271	115305	-271	-102672	5prime_fragment	FALSE	canonical	1	6	junction_2	4.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCAGCTTATTAGCAAGA	NA	False	NA	NA	False	NA	NA	NA	131579170	131388815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_131389149_131399573_131399705_131578667
transcript_148819.known	chrX	+	2508	3	FSM	ENSG00000286060.1	ENST00000651362.1	2508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTGGACTTTTCCTTGG	131578616	True	NA	NA	False	NA	NA	NA	131578680	131611684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_131578820_131587538_131589267_131611043
transcript_148830.known	chrX	-	1805	4	FSM	ENSG00000213468.7	ENST00000650184.1	1805	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	60.1793615416079	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAAATATATGGGAACTT	NA	False	NA	NA	False	AATAAA	-28	NA	131830604	131795049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131796332_131804971_131805038_131825221_131825366_131830291
transcript_148831.known	chrX	-	1240	3	FSM	ENSG00000213468.7	ENST00000668308.1	1240	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	91	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGCGCTGTCTTGGCCTT	NA	False	NA	-12	True	NA	NA	NA	131830673	131793752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131794467_131825221_131825366_131830291
transcript_148832.nnic	chrX	-	1455	3	NIC	ENSG00000213468.7	novel	1805	4	NA	NA	-5	-307	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	87	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGAAAAGAAAAGAAAG	NA	False	NA	NA	False	AATAAA	-28	NA	131830627	131795356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_131796332_131825221_131825366_131830291
transcript_148833.nnic	chrX	-	1302	3	NNC	ENSG00000213468.7	novel	2173	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	107.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830622	131823763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_131824591_131825221_131825366_131830291
transcript_148834.known	chrX	-	2173	2	FSM	ENSG00000213468.7	ENST00000657242.1	2173	2	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTGTTTGTTTGTT	NA	False	NA	NA	False	AATAAA	-18	NA	131830862	131823763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131825366_131830291
transcript_148836.known	chrX	-	881	3	FSM	ENSG00000213468.7	ENST00000653136.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	69.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGATATGAGAAAGTGC	NA	False	NA	NA	False	AATAAA	-11	NA	131830585	131804594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_131805038_131825221_131825366_131830291
transcript_148838.known	chrX	+	3251	12	FSM	ENSG00000134602.16	ENST00000394334.7	3251	12	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_1	37.6100039443526	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_148840.known	chrX	+	3179	11	FSM	ENSG00000134602.16	ENST00000354719.10	3179	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	139.187643129697	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016425	True	NA	31	True	AATAAA	-19	NA	132023301	132075943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132054630_132054862_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072965_132073094_132074134
transcript_148842.known	chrX	+	3017	11	FSM	ENSG00000134602.16	ENST00000394335.6	3017	11	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	138.344352974742	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAATGTTTGTTTTCCTTG	132016428	True	NA	31	True	AATAAA	-19	NA	132023304	132075943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132023408_132023507_132023660_132063432_132063490_132068214_132068324_132068411_132068570_132069477_132069664_132071068_132071218_132072267_132072362_132072812_132072876_132072956_132073094_132074134
transcript_148848.known	chrX	+	3771	3	FSM	ENSG00000232160.7	ENST00000441399.3	3771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAGCAAATAATGTATGAA	132218075	True	NA	NA	False	CATAAA	-27	NA	132218208	132432862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_132218838_132239619_132239712_132429812
transcript_148850.known	chrX	-	11263	8	FSM	ENSG00000076770.15	ENST00000394311.6	11263	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	2.32992949004287	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTTTCAGTCCTTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	132413608	132369316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413582
transcript_148854.known	chrX	-	1444	8	FSM	ENSG00000076770.15	ENST00000370849.7	1444	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.8642768079662	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTGTATTGTGTTGTG	NA	False	NA	NA	False	AATATA	-15	NA	132413575	132379202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_132379678_132382177_132382273_132384662_132384699_132386660_132386812_132390846_132391084_132392142_132392335_132406227_132406393_132413482
transcript_148858.known	chrX	-	2267	8	FSM	ENSG00000147257.16	ENST00000370818.8	2267	8	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_6	35.3466795484674	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133985594	133535744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_133536294_133596439_133596600_133661729_133661851_133692368_133692495_133699894_133700029_133753481_133754177_133953049_133953212_133985274
transcript_148859.nnic	chrX	-	619	3	NNC	ENSG00000147257.16	novel	1188	6	NA	NA	50452	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	197	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133611634	133535744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_133536294_133596439_133596491_133611615
transcript_148860.nnic	chrX	-	940	3	NNC	ENSG00000147257.16	novel	1188	6	NA	NA	22141	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	197	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATTGGCCCTTTTTTTGC	NA	False	NA	-28	True	AATAAA	-16	NA	133639945	133535744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_133536294_133596439_133596600_133639714
transcript_148862.nnic	chrX	+	1660	3	NNC	ENSG00000203952.9	novel	1790	3	NA	NA	159	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGCCTGTGGGTCTTAT	134236733	True	NA	11	True	AATAAA	-27	NA	134237205	134246207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_134237344_134238749_134238841_134244776
transcript_148863.known	chrX	+	1299	2	FSM	ENSG00000203952.9	ENST00000370809.4	1299	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTTAAAAAAATCCTTCCA	NA	False	NA	NA	False	NA	NA	NA	134237046	134245778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134237344_134244776
transcript_148866.known	chrX	+	4434	11	FSM	ENSG00000156531.18	ENST00000625464.2	4434	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	91.1276028434854	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTTGTCTTTTTTGTG	134366638	True	NA	15	True	AATAAA	-18	NA	134373311	134428791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200_134425331_134425660
transcript_148867.known	chrX	+	4759	10	FSM	ENSG00000156531.18	ENST00000332070.7	4759	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	61.2553852507861	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATTTGTTTGTCTTTTTTG	134366638	True	NA	13	True	AATAAA	-16	NA	134373311	134428789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490_134413658_134413822_134413967_134415015_134415121_134417168_134417303_134425200
transcript_148869.known	chrX	+	1150	8	FSM	ENSG00000156531.18	ENST00000370800.4	1150	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_5	101.921137981024	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTCTATGTAACTT	134366699	True	NA	NA	False	AATAAA	-21	NA	134373372	134415292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413487_134413658_134413822_134413967_134415015
transcript_148871.nic	chrX	+	730	6	ISM	ENSG00000156531.18	ENST00000691812.1	3892	11	-59	15212	-20	-1736	5prime_fragment	FALSE	canonical	3	173	junction_5	78.0820081708968	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCGCAAAGGAAGGCCAAGA	NA	False	NA	26	True	AGTAAA	-8	NA	134373267	134413556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_134373468_134377571_134377756_134378004_134378107_134393500_134393635_134393908_134393953_134413490
transcript_148874.nic	chrX	+	461	3	ISM	ENSG00000156531.18	ENST00000687834.1	5616	5	-73	12229	-20	-12229	5prime_fragment	FALSE	canonical	3	289	junction_2	32	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAATTAAAAGAGGCACGA	NA	False	NA	NA	False	AATGAA	-36	NA	134373267	134378081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_134373468_134377571_134377756_134378004
transcript_148875.nic	chrX	+	533	3	ISM	ENSG00000156531.18	ENST00000687834.1	5616	5	-73	12157	-20	-12157	5prime_fragment	FALSE	canonical	3	289	junction_2	32	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAGGAAATTGCTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	134373267	134378153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_134373468_134377571_134377756_134378004
transcript_14888.nic	chr1	-	568	3	ISM	ENSG00000183814.16	ENST00000481685.1	1916	13	63	64649	-19	-9669	5prime_fragment	FALSE	canonical	3	138	junction_2	12.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCATTGTGTAGCTCAAA	-226309168	False	NA	NA	False	ATTAAA	-30	NA	226309191	226297361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_226297814_226301172_226301206_226309108
transcript_148887.known	chrX	+	1395	9	FSM	ENSG00000165704.15	ENST00000298556.8	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_5	35.0158446278253	2226	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCTTTATGAATTCAATTT	134454409	True	NA	30	True	AATAAA	-16	NA	134460164	134500668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134460339_134473358_134473466_134475180_134475365_134486464_134486531_134490187_134490206_134493507_134493591_134498389_134498437_134498607_134498685_134500029
transcript_1489.known	chr1	+	863	4	FSM	ENSG00000171735.19	ENST00000476163.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	2371.92256759504	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGTCACTTGCGTCG	6761989	True	NA	15	True	AATAAA	-15	NA	6785463	6888201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6825091_6825211_6871756_6871841_6887653
transcript_14890.known	chr1	-	3978	23	FSM	ENSG00000143799.14	ENST00000366794.10	3978	23	0	0	0	0	multi-exon	FALSE	canonical	3	2138	junction_17	237.872804402647	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTATTGCGTGTCTGG	-226350354	True	NA	-7	True	ATTAAA	-20	NA	226408093	226360690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_226361542_226361968_226362084_226363098_226363161_226363942_226364071_226365001_226365155_226365953_226366053_226367479_226367609_226368198_226368322_226370433_226370518_226374225_226374355_226377107_226377304_226379141_226379275_226379572_226379642_226379921_226380165_226381067_226381209_226383035_226383184_226385503_226385681_226386325_226386443_226388655_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_148901.known	chrX	-	991	2	FSM	ENSG00000223749.11	ENST00000666697.1	991	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTCTGCAGTGCAAATTG	NA	False	NA	-14	True	ATTAAA	-15	NA	134545044	134543339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134544000_134544713
transcript_148902.known	chrX	-	1240	2	FSM	ENSG00000223749.11	ENST00000659680.1	1240	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGTGTCAATTAAGA	NA	False	NA	-1	True	AATAAA	-18	NA	134546332	134544425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134544798_134545464
transcript_148903.known	chrX	-	792	2	FSM	ENSG00000223749.11	ENST00000445415.2	792	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTGCAGTGCAAATTGT	NA	False	NA	-13	True	ATTAAA	-16	NA	134544912	134543338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134543932_134544713
transcript_148904.known	chrX	+	1298	3	FSM	ENSG00000227060.7	ENST00000654989.1	1298	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTTTCTGTGCCTGACTT	134549759	False	NA	NA	False	AATAAA	-18	NA	134549774	134560395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134549945_134558379_134558498_134559385
transcript_148905.nic	chrX	-	1157	4	NIC	ENSG00000170965.10	novel	1138	3	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.62466929133727	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGGCATTTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	134764330	134565837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_134566741_134602050_134602123_134733434_134733520_134764233
transcript_148907.nnic	chrX	-	1175	3	NNC	ENSG00000170965.10	novel	1119	3	NA	NA	19672	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGGGCATTTTTATTT	NA	False	NA	NA	False	AATAAA	-24	NA	134713964	134565837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_134566741_134602050_134602123_134713764
transcript_148908.known	chrX	-	333	3	FSM	ENSG00000170965.10	ENST00000473897.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGGTTGCCCCCCAAACC	NA	False	NA	NA	False	NA	NA	NA	134764263	134566509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134566741_134602050_134602123_134764233
transcript_148911.known	chrX	+	1592	11	FSM	ENSG00000156500.16	ENST00000645433.2	1592	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.40567815438214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATGTAATTGAGGCTTC	134806868	True	NA	NA	False	ATTAAA	-22	NA	134807236	134854832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134807342_134807539_134807709_134814770_134814850_134829225_134829283_134845204_134845249_134845346_134845402_134847382_134847476_134847882_134847972_134849166_134849229_134852799_134852897_134854090
transcript_148917.known	chrX	-	1078	11	FSM	ENSG00000156504.17	ENST00000493333.5	1078	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	43.9796543870004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACGCAGAGAACTTTGATCC	NA	False	NA	NA	False	CATAAA	-14	NA	134797187	134772078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_148919.known	chrX	-	1059	11	FSM	ENSG00000156504.17	ENST00000611027.2	1059	11	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_10	45.5487650765638	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACATAAAATGTTTAGTGG	NA	False	NA	NA	False	NA	NA	NA	134797187	134772100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_148923.nic	chrX	-	1560	10	NIC	ENSG00000156504.17	novel	1078	11	NA	NA	-52	-63	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	38.4447655734822	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTCAAGTACATTATT	NA	False	NA	-11	True	ATTAAA	-17	NA	134797284	134771636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_148927.nic	chrX	-	1563	10	NIC	ENSG00000156504.17	novel	1059	11	NA	NA	-52	-63	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	40.8849635797023	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGCTTCAAGTACATTATT	NA	False	NA	-11	True	ATTAAA	-17	NA	134797284	134771636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785951_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_148928.nic	chrX	-	1300	10	NIC	ENSG00000156504.17	novel	1078	11	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_9	38.4447655734822	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGATTGCTTAGAGGAA	NA	False	NA	-13	True	ATTAAA	-14	NA	134797284	134771896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_134772284_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134793814_134793894_134796107_134796356_134797120
transcript_148936.known	chrX	+	665	3	FSM	ENSG00000156500.16	ENST00000482240.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCATTCACTACATA	134806848	True	NA	NA	False	NA	NA	NA	134807216	134809557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134807342_134807539_134807709_134809186
transcript_148938.known	chrX	+	2483	2	FSM	ENSG00000156500.16	ENST00000475361.1	2483	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAACCTCTTGGTTCT	134806854	True	NA	NA	False	AATAAA	-17	NA	134807222	134811183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134807709_134809186
transcript_148940.known	chrX	-	2706	11	FSM	ENSG00000156504.17	ENST00000298090.10	2706	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	51.479704738858	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAGTGTTTTAAAAGTCTG	NA	False	NA	-18	True	AATAAA	-24	NA	134797232	134769566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134771355_134781820_134781918_134785885_134785948_134787471_134787534_134788729_134788832_134789084_134789140_134789222_134789267_134789579_134789637_134793814_134793894_134796107_134796356_134797120
transcript_148941.known	chrX	+	1368	7	FSM	ENSG00000156500.16	ENST00000370784.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.28099317258495	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTAATGATCCATGCTAGT	134806824	True	NA	NA	False	AGTAAA	-21	NA	134807192	134854610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134807709_134814770_134814850_134829225_134829283_134845204_134845249_134845346_134845402_134852799_134852897_134854090
transcript_148958.known	chrX	-	2348	6	FSM	ENSG00000101928.13	ENST00000370783.8	2348	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	33.956442687655	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTCACATTGATTTAAACA	NA	False	NA	-11	True	AATAAA	-18	NA	134915257	134887631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134891478_134891641_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_148959.known	chrX	-	773	5	FSM	ENSG00000101928.13	ENST00000370779.8	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	43.6828055417689	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTTAATTTGAAGGACT	NA	False	NA	98	True	AATATA	-12	NA	134915227	134889014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134896816_134897035_134899089_134899166_134899279_134899535_134915181
transcript_148960.known	chrX	-	784	5	FSM	ENSG00000101928.13	ENST00000370777.1	784	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.053287944081	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATATGAATGTGGACTG	NA	False	NA	-10	True	AGTAAA	-9	NA	134899534	134889122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134889193_134891478_134891641_134896813_134897035_134899089_134899166_134899279
transcript_148961.known	chrX	-	574	2	FSM	ENSG00000101928.13	ENST00000462060.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTCTTGAAGCTGTT	NA	False	NA	NA	False	NA	NA	NA	134915238	134899017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_134899535_134915181
transcript_148962.known	chrX	+	1483	1	FSM	ENSG00000184785.6	ENST00000330288.6	1483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	98	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTGCATTTAGAATGAA	134990885	True	NA	NA	False	ATTAAA	-21	NA	134990990	134992473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_134991000_134992500
transcript_148963.known	chrX	-	2030	1	FSM	ENSG00000212747.5	ENST00000391440.3	2030	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	101	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGAAGTTTTAGTCTT	NA	False	NA	-14	True	ATTAAA	-20	NA	135022542	135020512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135020500_135022500
transcript_148964.known	chrX	+	1192	1	FSM	ENSG00000134590.14	ENST00000257013.9	1192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	606	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027961	True	NA	NA	False	AATAAA	-24	NA	135032354	135033546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135032400_135033500
transcript_148965.known	chrX	+	616	2	FSM	ENSG00000134590.14	ENST00000464369.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTCAATGAATATGGCA	135027988	False	NA	NA	False	AATAAA	-24	NA	135032381	135033546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135032576_135033124
transcript_148966.known	chrX	-	536	2	FSM	ENSG00000203950.7	ENST00000522309.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	0	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTCTCTGATGGGTGCC	NA	False	NA	NA	False	NA	NA	NA	135052141	135051057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135051369_135051916
transcript_148967.known	chrX	-	817	2	FSM	ENSG00000203950.7	ENST00000520964.1	817	2	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAAATGGAGTCTCAAT	NA	False	NA	NA	False	AATAAA	-16	NA	135052196	135050939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135051477_135051916
transcript_148968.known	chrX	-	1204	1	FSM	ENSG00000203950.7	ENST00000370775.3	1204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	529	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	NA	False	NA	NA	False	AATAAA	-24	NA	135052135	135050931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135050900_135052100
transcript_148969.known	chrX	-	762	2	FSM	ENSG00000203950.7	ENST00000518153.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAGTCTCAATGAATATGG	NA	False	NA	NA	False	AATAAA	-24	NA	135052090	135050931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135051520_135051916
transcript_148975.known	chrX	-	726	4	FSM	ENSG00000228836.8	ENST00000617203.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATTTCTGTTAGTAAA	NA	False	NA	NA	False	NA	NA	NA	135781729	135777479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135777694_135778917_135779012_135779392_135779642_135781560
transcript_148976.known	chrX	+	4755	17	FSM	ENSG00000198689.13	ENST00000370701.6	4755	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.2995551494633	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGTATTTGAGTCACA	NA	False	NA	17	True	ATTAAA	-26	NA	135985134	136047130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135985478_135985602_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_148977.known	chrX	+	4711	16	FSM	ENSG00000198689.13	ENST00000370695.8	4711	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	29.3572629665793	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTTAACTTATGGGTTGG	135983881	True	NA	NA	False	AATAAA	-18	NA	135985434	136047261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_135985828_135994785_135994986_135998107_135998186_135998481_135998559_135998855_135998969_136002107_136002214_136010441_136010584_136012948_136013055_136013348_136013438_136016644_136016759_136022585_136022698_136024329_136024484_136030131_136030163_136033413_136033494_136040075_136040182_136044451
transcript_148978.nic	chrX	+	496	2	ISM	ENSG00000198689.13	ENST00000636347.1	4867	18	-44	72371	-44	-23987	5prime_fragment	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACGCAGCCTTCTTGCCTT	135973756	True	NA	NA	False	AAGAAA	-27	NA	135973796	135974896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_135974033_135974636
transcript_148979.known	chrX	-	5145	4	FSM	ENSG00000169446.6	ENST00000305963.3	5145	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	2.05480466765633	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGGTTTTTTTTTCA	NA	False	NA	-4	True	AATAAA	-21	NA	135973988	135960587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596
transcript_148980.known	chrX	-	1019	5	FSM	ENSG00000169446.6	ENST00000679621.1	1019	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	56.8968364674171	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGGAATCCTTTTGG	NA	False	NA	NA	False	NA	NA	NA	135974029	135964677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_135965184_135967389_135967494_135971057_135971111_135973596_135973823_135973899
transcript_148981.known	chrX	+	2441	7	FSM	ENSG00000022267.19	ENST00000651929.2	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_6	16.9156403629567	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTTTTCATTCTGC	136145892	True	NA	15	True	AATAAA	-21	NA	136147464	136211359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136147629_136169906_136169981_136206406_136206589_136207015_136207191_136207791_136207962_136208454_136208642_136209870
transcript_148983.known	chrX	-	4385	19	FSM	ENSG00000129680.16	ENST00000316077.14	4385	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	16.1563540991703	127	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGGTTTTTTCATTATAA	NA	False	NA	NA	False	AATAAA	-15	NA	136251400	136216813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136218494_136219397_136219496_136219592_136219672_136220764_136220964_136222392_136222487_136224826_136224881_136225908_136226014_136227283_136227432_136228622_136228759_136230384_136230594_136230838_136230967_136231543_136232221_136236243_136236340_136240381_136240487_136241159_136241278_136244631_136244796_136246064_136246149_136246242_136246342_136251288
transcript_148984.known	chrX	+	3019	10	FSM	ENSG00000102241.12	ENST00000535601.5	3019	10	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	147.452775449139	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATTGGACTTGAGTTAAA	136497040	False	NA	59	True	AATAAA	-27	NA	136497078	136512342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_148985.known	chrX	+	2694	9	FSM	ENSG00000102241.12	ENST00000218364.5	2694	9	0	0	0	0	multi-exon	FALSE	canonical	3	555	junction_6	65.9941995557185	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGACTTGAGTTAAATTGC	136494566	False	NA	63	True	AATAAA	-31	NA	136497591	136512346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504363_136504464_136509090_136509181_136510081_136510220_136510807
transcript_148987.known	chrX	+	1014	6	FSM	ENSG00000102241.12	ENST00000448450.5	1014	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	191.846813890666	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTAATTTTTTTCCCTT	136489789	True	NA	NA	False	NA	NA	NA	136497220	136502941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136497440_136497623_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_148988.nnic	chrX	+	1400	6	NNC	ENSG00000102241.12	novel	2694	9	NA	NA	-65	2085	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	266.1074970759	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGTTCTGAGGAATATTGT	136497301	False	NA	NA	False	AATAAA	-18	NA	136497526	136505026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777_136502942_136504518
transcript_148990.nic	chrX	+	1478	5	ISM	ENSG00000102241.12	ENST00000448450.5	1014	6	306	-586	-65	586	3prime_fragment	FALSE	canonical	3	558	junction_4	77.170266294733	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTTGTGATGTCTCATT	136497301	False	NA	NA	False	ATTAAA	-14	NA	136497526	136503527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_136497871_136499597_136499779_136500157_136500206_136500663_136500819_136502777
transcript_148991.known	chrX	+	690	3	FSM	ENSG00000233093.7	ENST00000454385.7	693	3	0	3	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTTTCTTCAAGTGTAA	NA	False	NA	NA	False	AATAAA	-15	NA	136639538	136642426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136639805_136640773_136640874_136642102
transcript_1490.known	chr1	+	546	4	FSM	ENSG00000171735.19	ENST00000467404.6	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2627.00911473274	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTAATCTGTGTTTTCAT	6762043	True	NA	15	True	ATTAAA	-23	NA	6785517	6872019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6806982_6807089_6825091_6825211_6871756
transcript_14900.nic	chr1	-	884	5	ISM	ENSG00000143799.14	ENST00000676709.1	4764	22	16	27950	16	0	5prime_fragment	FALSE	canonical	3	2242	junction_4	19.6659604392971	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAGACAAGGATAG	-226350399	True	NA	25	True	AAGAAA	-7	NA	226408138	226388697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_226388756_226390409_226390625_226392198_226392315_226402213_226402380_226407809
transcript_149000.known	chrX	-	2012	9	FSM	ENSG00000147274.14	ENST00000320676.11	2012	9	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_8	205.541358368577	6294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATGAAGCTGCAAAGGTGC	NA	False	NA	-19	True	AATAAA	-19	NA	136880725	136873460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_149001.known	chrX	-	1852	8	FSM	ENSG00000147274.14	ENST00000464781.5	1852	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	1350.67907334928	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTGCTTGCTCTTACTG	NA	False	NA	-7	True	AATAAA	-31	NA	136880725	136873448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136879016_136879124_136879318_136879454_136880596
transcript_149002.known	chrX	-	1292	7	FSM	ENSG00000147274.14	ENST00000565438.1	1292	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1457.76572763482	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACATGTTTAATTTTA	NA	False	NA	-24	True	NA	NA	NA	136880764	136873977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136874453_136875085_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136880596
transcript_149003.known	chrX	-	2148	8	FSM	ENSG00000147274.14	ENST00000562646.5	2148	8	0	0	0	0	multi-exon	FALSE	canonical	3	3462	junction_7	218.96248863349	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACTTTCGCATTGCTTT	NA	False	NA	-4	True	AGTAAA	-16	NA	136880725	136873957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_136875169_136875257_136875384_136875470_136875586_136876502_136876656_136877914_136878087_136879016_136879124_136879318_136879454_136880596
transcript_149005.known	chrX	+	646	3	FSM	ENSG00000234062.9	ENST00000431464.6	1253	3	82	525	28	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGGCCTCAGTTTGTA	136909275	False	NA	12	True	TATAAA	-15	NA	136909474	137021618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136909781_136925246_136925380_137021411
transcript_149006.known	chrX	+	1144	2	FSM	ENSG00000234062.9	ENST00000650669.2	1146	2	0	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGGGTTTATTTGCTTT	NA	False	NA	14	True	AATAAA	-16	NA	136909368	137022143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_136909781_137021411
transcript_149007.known	chrX	-	78	1	FSM	ENSG00000214748.2	ENST00000442158.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	148	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	137325049	137324971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_137325000_137325000
transcript_149008.known	chrX	-	304	3	FSM	ENSG00000224765.2	ENST00000456631.1	304	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGGACCTGGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	137563925	137556190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_137556305_137561043_137561198_137563889
transcript_149009.nic	chrX	-	425	3	FSM	ENSG00000224765.2	ENST00000690456.1	422	3	-3	0	1	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTATGGACCTGGAAC	NA	False	NA	NA	False	AATAAA	-19	NA	137564487	137556190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_137556305_137561043_137561198_137564330
transcript_149012.nnic	chrX	-	384	2	NNC	ENSG00000224765.2	novel	304	3	NA	NA	-190	-2189	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTATGTGGTCGGGTCTA	NA	False	NA	NA	False	AATAAA	-21	NA	137564115	137562857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_137563016_137563889
transcript_149014.known	chrX	+	4001	3	FSM	ENSG00000156925.12	ENST00000287538.10	4001	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	7	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTATTTGGTGCCTGA	137562330	True	NA	-16	True	AATAAA	-31	NA	137566126	137572102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_137567752_137568901_137569066_137569890
transcript_149017.known	chrX	+	1968	3	FSM	ENSG00000156925.12	ENST00000370606.3	1968	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	115	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137565960	True	NA	11	True	AATAAA	-14	NA	137566517	137577691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_137567752_137568901_137569066_137577121
transcript_149023.nnic	chrX	+	864	3	NNC	ENSG00000283692.2	novel	1835	4	NA	NA	-186	-403690	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137573512	True	NA	11	True	AATAAA	-14	NA	137573565	137577691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_137573709_137573968_137574120_137577121
transcript_149024.nnic	chrX	+	775	3	NNC	ENSG00000283692.2	novel	1835	4	NA	NA	-183	-403690	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	98	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137573515	True	NA	11	True	AATAAA	-14	NA	137573568	137577691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_137573623_137573968_137574120_137577121
transcript_149025.known	chrX	+	366	2	FSM	ENSG00000156925.12	ENST00000478471.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCTTCTGCAGTTCAAAC	137568790	False	NA	NA	False	AGTAAA	-13	NA	137568804	137569995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_137569066_137569890
transcript_149030.nic	chrX	+	928	2	ISM	ENSG00000156925.12	ENST00000370606.3	1968	3	2190	0	-97	0	3prime_fragment	FALSE	canonical	3	32	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTGATTATTGTTTTA	137568551	True	NA	11	True	AATAAA	-14	NA	137568707	137577691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_137569066_137577121
transcript_149033.known	chrX	-	19575	5	FSM	ENSG00000129682.16	ENST00000315930.11	19575	5	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_4	22.0340645365307	271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTGTGTGATCATTGGC	NA	False	NA	2	True	AATAAA	-25	NA	138711717	138614726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_138632987_138635456_138635656_138702983_138703088_138708817_138708929_138710816
transcript_149043.nnic	chrX	+	961	3	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-294	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	138711784	False	NA	NA	False	AAAAAG	-28	NA	138711812	138716617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_138711961_138714723_138714810_138715890
transcript_149044.nnic	chrX	+	1435	3	NNC	ENSG00000226031.5	novel	584	4	NA	NA	-294	474	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGTATTAATCATGTCT	138711784	False	NA	4	True	ATTAAA	-15	NA	138711812	138717091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_138711961_138714723_138714810_138715890
transcript_149047.known	chrX	+	849	3	FSM	ENSG00000226031.5	ENST00000438238.1	849	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGACACTTAACTCCAGGA	138711689	False	NA	NA	False	AAAAAG	-28	NA	138712106	138716617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_138712143_138714723_138714810_138715890
transcript_149054.nnic	chrX	+	1003	2	NIC	ENSG00000226031.5	novel	849	3	NA	NA	-252	-12	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAGAAAAGAAATAGACAC	138711437	True	NA	NA	False	AAAAAG	-16	NA	138711854	138716605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_138712143_138715890
transcript_149055.known	chrX	+	1497	1	FSM	ENSG00000230707.3	ENST00000453380.3	1234	1	-263	0	-263	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGTGACCTTATTTATT	140091376	True	NA	5	True	AATAAA	-16	NA	140091414	140092911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140091400_140092900
transcript_149056.known	chrX	+	3997	4	FSM	ENSG00000203930.13	ENST00000648508.1	3997	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTGATATTTTGAAGGA	140709648	True	NA	NA	False	NA	NA	NA	140709758	140775904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140709806_140711620_140711657_140733877_140733965_140772077
transcript_149058.known	chrX	+	802	3	FSM	ENSG00000203930.13	ENST00000602535.2	802	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGCCAGTGAATCGGG	140764385	True	NA	NA	False	AATAAA	-17	NA	140764561	140772680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140764699_140768344_140768407_140772077
transcript_149059.known	chrX	+	1354	2	FSM	ENSG00000203930.13	ENST00000669839.1	1354	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTGGCCTGTAATGAAAA	140764321	True	NA	NA	False	AAGAAA	-24	NA	140764497	140773230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_140764699_140772077
transcript_149063.nnic	chrX	-	1280	2	NNC	ENSG00000182195.9	novel	784	2	NA	NA	-41	4	intron_retention	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTTTAATGGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	141177170	141175744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_141175881_141176026
transcript_149064.nnic	chrX	-	1354	2	NNC	ENSG00000182195.9	novel	784	2	NA	NA	-50	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGTCTTTTAATGGTTA	NA	False	NA	NA	False	AATAAA	-23	NA	141177179	141175744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_141176812_141176892
transcript_149065.known	chrX	-	784	2	FSM	ENSG00000182195.9	ENST00000460721.1	784	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGATTGTCTTTTAATG	NA	False	NA	NA	False	AATAAA	-19	NA	141177016	141175748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_141176409_141176892
transcript_149066.known	chrX	-	691	2	FSM	ENSG00000198021.7	ENST00000370519.3	691	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTCTGCCTGTTTTCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	141585011	141583673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_141583960_141584606
transcript_149067.known	chrX	+	408	2	FSM	ENSG00000203926.5	ENST00000370518.4	408	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTGTATATCTCTGCC	NA	False	NA	NA	False	AATAAA	-15	NA	141589707	141590762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_141589840_141590486
transcript_149072.known	chrX	+	470	4	ISM	ENSG00000102081.16	ENST00000475038.3	2747	16	31069	978	-1448	30	3prime_fragment	FALSE	canonical	3	22	junction_3	81.0651315644128	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTAATTTCTTGCACTTCT	147943212	True	NA	4	True	AATAAA	-14	NA	147943244	147948534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_+_147943327_147944868_147945052_147945533_147945617_147948412
transcript_149076.nnic	chrX	-	885	5	Intergenic	novelGene_78	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTGTTGTTTTATAGT	NA	False	NA	NA	False	AATAAA	-26	NA	149436297	149364322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chrX_-_149364594_149366379_149366518_149378932_149379034_149379128_149379281_149436074
transcript_149080.known	chrX	-	7580	9	FSM	ENSG00000010404.18	ENST00000340855.11	7580	9	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_1	22.0535569693417	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCGTGTGTGCAATTCTT	NA	False	NA	NA	False	AATAAA	-18	NA	149505306	149476987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149483219_149486924_149487099_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_149085.known	chrX	-	1399	8	FSM	ENSG00000010404.18	ENST00000370441.8	1399	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	32.7014946921703	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGTCATTCTGTGCTT	NA	False	NA	-2	True	AATAAA	-26	NA	149505347	149487130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149487314_149490313_149490441_149496345_149496517_149498106_149498308_149500948_149501038_149503311_149503490_149504156_149504294_149505034
transcript_14909.known	chr1	+	1947	13	FSM	ENSG00000143801.18	ENST00000422240.6	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_10	29.3838343689557	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACAGCAGGTTTATCCAG	226869384	True	NA	95	True	NA	NA	NA	226870619	226895803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891745_226891845_226894006_226894126_226895423
transcript_149094.known	chrX	+	1524	6	FSM	ENSG00000197620.11	ENST00000434353.6	1524	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	26.9265668067803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCAATAAATACTGTCCA	149540912	True	NA	NA	False	NA	NA	NA	149540986	149549940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738_149546918_149549415
transcript_149096.known	chrX	+	1204	5	FSM	ENSG00000197620.11	ENST00000450602.6	1204	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	29.0807066626655	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540603	False	NA	NA	False	AATAAA	-15	NA	149540629	149547309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149540800_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_149097.nic	chrX	+	1276	5	NIC	ENSG00000197620.11	novel	1204	5	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	30.3685692781204	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149540576	149547309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_149540800_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_149098.nic	chrX	+	1484	5	NIC	ENSG00000197620.11	novel	1403	5	NA	NA	-132	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	30.1858824618397	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540795	False	NA	NA	False	AATAAA	-15	NA	149540842	149547309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_149541293_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_149099.known	chrX	+	1208	5	FSM	ENSG00000197620.11	ENST00000423540.6	1208	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31.372758884102	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTTGTGTGATGCCTC	149540908	True	NA	NA	False	NA	NA	NA	149540982	149547154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541293_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_149100.known	chrX	+	1403	5	FSM	ENSG00000197620.11	ENST00000423421.5	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	26.8374738006393	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	149540900	True	NA	NA	False	AATAAA	-15	NA	149540974	149547309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541344_149542018_149542067_149545367_149545501_149545601_149545884_149546738
transcript_149102.known	chrX	+	2407	5	FSM	ENSG00000197620.11	ENST00000393985.8	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	28.3670142947755	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAATTTGCAGTGTTTCTGA	149540937	True	NA	NA	False	ATTAAA	-42	NA	149541011	149548331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_149541344_149542018_149542086_149545367_149545501_149545601_149545884_149546738
transcript_149103.known	chrX	-	2720	7	FSM	ENSG00000269556.9	ENST00000600449.8	2720	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	25.9020591202064	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631792	149596555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149611286_149611464_149631542
transcript_149104.known	chrX	-	2662	6	FSM	ENSG00000269556.9	ENST00000611119.4	2662	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	61.6038959806926	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACGTGCATGATGTGTATC	NA	False	NA	NA	False	AATAAA	-16	NA	149631912	149596556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149603986_149604071_149608626_149608835_149631542
transcript_149107.known	chrX	-	2178	4	FSM	ENSG00000269556.9	ENST00000612022.1	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	73.6176307385368	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGCATGATGTGTATCT	NA	False	NA	NA	False	AATAAA	-17	NA	149631719	149596555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149598256_149599553_149599678_149600302_149600480_149631542
transcript_149108.known	chrX	-	903	4	FSM	ENSG00000269556.9	ENST00000507237.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	21.6487105081727	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTCTAAAGTTTAATTG	NA	False	NA	NA	False	AATAAA	-16	NA	149631698	149603708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149604071_149608626_149608835_149611286_149611464_149631542
transcript_14911.known	chr1	+	2193	12	FSM	ENSG00000143801.18	ENST00000678320.1	2193	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	37.661388254939	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	226869325	True	NA	8	True	AATAAA	-8	NA	226870560	226896086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_149118.nic	chrX	-	1887	6	NIC	ENSG00000197021.9	novel	1440	6	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_1	80.8653201316856	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938831	149929526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_149119.known	chrX	-	1440	6	FSM	ENSG00000197021.9	ENST00000462691.5	1440	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	66.9883571973518	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCTCGGTATCAGGGCAA	NA	False	NA	NA	False	AATAAA	-20	NA	149938435	149929526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149930082_149932588_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938192
transcript_14912.known	chr1	+	2026	12	FSM	ENSG00000143801.18	ENST00000678021.1	2026	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	39.5482757614346	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGTTAGAATCTTGGAG	226869376	True	NA	8	True	AATAAA	-8	NA	226870611	226896086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226871261_226871405_226875364_226875551_226881887_226882049_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_149124.known	chrX	-	1129	6	FSM	ENSG00000197021.9	ENST00000370409.7	1129	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	96.5538191890927	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCACCTGATCCCTTTG	NA	False	NA	NA	False	NA	NA	NA	149938472	149932578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149934376_149934574_149937432_149937481_149938192
transcript_14913.known	chr1	+	2144	12	FSM	ENSG00000143801.18	ENST00000677414.1	2144	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	35.4011252564306	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTAGAATCTTGGAGTT	226869332	True	NA	10	True	AATAAA	-10	NA	226870567	226896088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226870650_226875364_226875551_226881887_226882049_226883704_226883920_226885537_226885680_226888090_226888159_226888828_226889050_226890034_226890134_226891277_226891362_226891742_226891845_226894006_226894126_226895423
transcript_149132.nic	chrX	-	1724	5	NIC	ENSG00000197021.9	novel	1333	5	NA	NA	-131	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_4	73.1688970806585	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938831	149932196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938141
transcript_149133.known	chrX	-	1316	5	FSM	ENSG00000197021.9	ENST00000370404.5	1316	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	81.567073626556	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACTGGTTAGTGTTTGAG	NA	False	NA	NA	False	AATAAA	-11	NA	149938459	149932200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937413_149937481_149938192
transcript_149134.nnic	chrX	-	1383	5	NNC	ENSG00000197021.9	novel	1333	5	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_4	83.8104259624064	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTAGTGTTTGAGGCTT	NA	False	NA	NA	False	AATAAA	-15	NA	149938744	149932196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432_149937481_149938395
transcript_149137.known	chrX	-	1067	4	FSM	ENSG00000197021.9	ENST00000355203.6	1067	4	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	29.5108266385218	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGTTAGTGTTTGAGGCT	NA	False	NA	NA	False	AATAAA	-14	NA	149937514	149932197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_149932768_149933621_149933904_149934004_149934138_149937432
transcript_149138.known	chrX	+	3412	15	FSM	ENSG00000171100.16	ENST00000370396.7	3412	15	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_10	10.1882785792382	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGTTTTCAGGGCTGTGA	150567439	True	NA	10	True	AATAAA	-20	NA	150568620	150673143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037_150619140_150638942_150639027_150641268_150641419_150645682_150645872_150649715_150649902_150657820_150658028_150659663_150659757_150660370_150660485_150663432_150663610_150671427
transcript_149140.nic	chrX	+	1448	6	FSM	ENSG00000171100.16	ENST00000687365.1	1411	6	-37	0	-1	0	multi-exon	FALSE	canonical	3	65	junction_5	7.30479294709987	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTATATTAGAGTTTT	150567399	True	NA	NA	False	ATTAAA	-18	NA	150568580	150620051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150568663_150592604_150592678_150596497_150596571_150598591_150598687_150614588_150614700_150619037
transcript_149145.nic	chrX	-	671	2	ISM	ENSG00000102181.21	ENST00000491877.1	437	5	-99	15910	-40	-15910	5prime_fragment	FALSE	canonical	3	43	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAAGAAATGGTTG	NA	False	NA	NA	False	AAAAAG	-10	NA	150898708	150830809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_150831294_150898521
transcript_149146.nnic	chrX	-	1006	2	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	61	-82299	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTTGAATTTTCTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	150898755	150897198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_150897971_150898521
transcript_149147.nnic	chrX	-	481	2	NNC	ENSG00000102181.21	novel	3567	11	NA	NA	61	-82824	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGTCTTAAACATGTACC	NA	False	NA	NA	False	AATAAA	-20	NA	150898755	150897723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_150897971_150898521
transcript_149156.known	chrX	+	812	5	FSM	ENSG00000029993.15	ENST00000448905.6	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	1819.00403724126	1953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGTGAATACTTAGAGT	150918552	False	NA	6	True	AATAAA	-18	NA	150983405	150987932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150983592_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_149161.known	chrX	+	3507	5	FSM	ENSG00000029993.15	ENST00000325307.12	3507	5	0	0	0	0	multi-exon	FALSE	canonical	3	3732	junction_1	426.780974271347	8867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATCAGTGGGCTGTCTGC	150918481	True	NA	40	True	AATAAA	-26	NA	150983334	150990771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_150983377_150985594_150985750_150986050_150986191_150987127_150987303_150987776
transcript_149162.known	chrX	+	2020	2	FSM	ENSG00000102195.10	ENST00000218316.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCTTTCTAGTTTGTT	151175542	True	NA	NA	False	NA	NA	NA	151176583	151181465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151176909_151179770
transcript_149164.known	chrX	+	4715	3	FSM	ENSG00000160131.14	ENST00000330374.7	4715	3	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_2	3.5	1722	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTGTGTCCTGATTCA	151392726	True	NA	17	True	ATTAAA	-20	NA	151397205	151409364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151397362_151403630_151403741_151404915
transcript_149168.known	chrX	+	482	2	FSM	ENSG00000214915.3	ENST00000454307.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATGAACCTGTTGTAA	NA	False	NA	NA	False	NA	NA	NA	151515550	151516245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151515681_151515893
transcript_149170.known	chrX	+	5705	4	FSM	ENSG00000130032.17	ENST00000674457.1	5705	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.96655480858378	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTCGTCATCCATCTTG	151695363	True	NA	12	True	AATAAA	-23	NA	151695457	151705924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151695545_151698783_151698822_151699995_151700157_151700505
transcript_149172.known	chrX	+	1312	4	FSM	ENSG00000130032.17	ENST00000674374.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.0184900284226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAAACAAAATGAAAAAAT	151695361	True	NA	NA	False	NA	NA	NA	151695455	151701540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151695545_151698783_151698822_151700006_151700157_151700505
transcript_149174.known	chrX	+	1841	4	FSM	ENSG00000147381.12	ENST00000682265.1	1841	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.0819306696935	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151912478	False	NA	16	True	AATAAA	-13	NA	151912508	151925166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151912543_151912801_151912970_151923452_151923525_151923599
transcript_149177.known	chrX	+	735	3	FSM	ENSG00000147381.12	ENST00000431963.6	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCCTATGATGGCCTG	151912464	True	NA	NA	False	NA	NA	NA	151912494	151924214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151912543_151923452_151923525_151923599
transcript_149178.known	chrX	+	914	3	FSM	ENSG00000147381.12	ENST00000448295.5	914	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	14.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAGGAGGAAATCTGGGA	151913395	False	NA	NA	False	NA	NA	NA	151913462	151924315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151913589_151923452_151923525_151923599
transcript_149179.known	chrX	+	990	3	FSM	ENSG00000147381.12	ENST00000441865.5	990	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	26.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCAGGAAACTGCTCACC	151914762	False	NA	NA	False	NA	NA	NA	151914829	151924388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151914959_151923452_151923525_151923599
transcript_149180.known	chrX	+	1767	3	FSM	ENSG00000147381.12	ENST00000684668.1	1767	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	13.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	151916127	False	NA	18	True	AATAAA	-15	NA	151916194	151925168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151916321_151923452_151923525_151923599
transcript_149181.known	chrX	+	1770	3	FSM	ENSG00000147381.12	ENST00000393920.6	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	26.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGCTCATTTCTTCTCT	151916806	False	NA	18	True	AATAAA	-15	NA	151916873	151925168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151917003_151923452_151923525_151923599
transcript_149182.known	chrX	+	1773	3	FSM	ENSG00000147381.12	ENST00000360243.6	1773	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	33	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151918159	False	NA	20	True	AATAAA	-17	NA	151918226	151925170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151918357_151923452_151923525_151923599
transcript_149185.known	chrX	+	1724	3	FSM	ENSG00000147381.12	ENST00000276344.6	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	42.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTCATTTCTTCTCTAT	151912821	True	NA	20	True	AATAAA	-17	NA	151912888	151925170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151912970_151923452_151923525_151923599
transcript_149186.known	chrX	+	1982	3	FSM	ENSG00000147381.12	ENST00000393921.6	1982	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	48.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACTGGCTCATTTCTTCT	151916151	False	NA	16	True	AATAAA	-13	NA	151916218	151925166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_151916321_151923211_151923525_151923599
transcript_149189.nnic	chrX	-	1103	6	NNC	ENSG00000011677.13	novel	3669	10	NA	NA	-74	7038	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21.2847363150216	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGATATGTTTGCTTGT	NA	False	NA	NA	False	AATAAA	-36	NA	152451389	152244019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_152244302_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_149191.nic	chrX	-	1636	5	ISM	ENSG00000011677.13	ENST00000370314.9	3669	10	-74	88729	-74	-3905	5prime_fragment	FALSE	canonical	3	45	junction_1	5.53962995154008	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATAAGATTCTTTCCC	NA	False	NA	NA	False	AATAAA	-17	NA	152451389	152254962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_149192.known	chrX	-	3669	10	FSM	ENSG00000011677.13	ENST00000370314.9	3669	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	19.4809181723939	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTCTGCAGAACTTTCT	NA	False	NA	0	True	ATTAAA	-17	NA	152451315	152166233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152168564_152189729_152189942_152197632_152197786_152208000_152208145_152224762_152224846_152255777_152255999_152284667_152284736_152345580_152345703_152364430_152364597_152451145
transcript_149196.nnic	chrX	+	1627	9	NNC	ENSG00000268089.3	novel	6468	9	NA	NA	-30	1417	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_8	12.0208152801713	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACCAGACAATGGCTAACT	152637389	True	NA	7	True	AATAAA	-23	NA	152637864	152658959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152658828
transcript_149198.known	chrX	+	6468	9	FSM	ENSG00000268089.3	ENST00000598523.3	6468	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	10.2072278312968	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCATCGTGTTTCCTC	152637419	True	NA	11	True	AATAAA	-24	NA	152637894	152657542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152638352_152640377_152640467_152645526_152645595_152646947_152647169_152649250_152649334_152649741_152649880_152650427_152650581_152651525_152651783_152652540
transcript_149199.known	chrX	+	1682	3	FSM	ENSG00000221867.9	ENST00000370278.4	1682	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCGTTTCTTTTCCGT	152698637	True	NA	NA	False	AATAAA	-17	NA	152698793	152702347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152698830_152700621_152700688_152700767
transcript_149207.known	chrX	-	789	5	FSM	ENSG00000268902.4	ENST00000598036.1	789	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.667204298278	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152714549	152708260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152708641_152708834_152709008_152709460_152709576_152713255_152713316_152714488
transcript_149216.known	chrX	+	1886	5	FSM	ENSG00000183305.14	ENST00000682532.1	1886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	62.5319918121916	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714627	152718607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152714683_152715078_152715158_152715956_152716077_152716895_152716962_152717041
transcript_149217.known	chrX	+	879	5	FSM	ENSG00000183305.14	ENST00000423993.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	66.8893676154888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCCTCCGAGTACTTGCA	NA	False	NA	NA	False	NA	NA	NA	152714608	152717562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152714683_152715956_152716077_152716647_152716746_152716895_152716962_152717041
transcript_149221.known	chrX	+	1714	3	FSM	ENSG00000183305.14	ENST00000370293.6	1714	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	91	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152714600	152718607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152714683_152716895_152716962_152717041
transcript_149222.known	chrX	-	875	5	FSM	ENSG00000198930.13	ENST00000370287.7	875	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.33012701892219	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733735	152727483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152727864_152728073_152728225_152732444_152732505_152733020_152733237_152733667
transcript_149223.known	chrX	-	645	4	FSM	ENSG00000198930.13	ENST00000452779.3	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.49691252107735	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	1	True	AATAAA	-21	NA	152733721	152727483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152727864_152728073_152728225_152732444_152732505_152733667
transcript_149224.known	chrX	+	755	4	FSM	ENSG00000242599.7	ENST00000361201.8	755	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	152733765	True	NA	NA	False	AATAAA	-18	NA	152733826	152740985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152733860_152739682_152739880_152740250_152740402_152740611
transcript_149226.known	chrX	+	1792	3	FSM	ENSG00000213401.10	ENST00000393869.8	1792	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	152733695	True	NA	3	True	AATAAA	-4	NA	152733756	152737669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152733860_152735147_152735254_152736086
transcript_149227.known	chrX	+	1664	2	FSM	ENSG00000213401.10	ENST00000357916.8	1664	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	152733717	True	NA	3	True	AATAAA	-4	NA	152733778	152737669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152733860_152736086
transcript_149231.known	chrX	-	725	6	FSM	ENSG00000268606.6	ENST00000617846.4	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	62.3326559677991	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATCCGATGAGGGCTCCA	NA	False	NA	NA	False	NA	NA	NA	152753842	152751121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753312_152753392_152753787
transcript_149233.known	chrX	-	576	6	FSM	ENSG00000268606.6	ENST00000617505.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	64.8197500766549	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGCTTCTTCCTCTTCTAC	NA	False	NA	NA	False	NA	NA	NA	152753840	152751252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753541_152753624_152753787
transcript_149234.known	chrX	-	1947	5	FSM	ENSG00000268606.6	ENST00000620710.4	1947	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	66.5093978321861	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753884	152749862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152751724_152751823_152752393_152752514_152753787
transcript_149235.known	chrX	-	1886	5	FSM	ENSG00000268606.6	ENST00000684311.1	1886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	62.0664965984065	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753842	152749862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753312_152753392_152753787
transcript_149237.known	chrX	-	2024	4	FSM	ENSG00000268606.6	ENST00000611557.4	2024	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	78.4984076271615	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCATTTCTTTACCAT	NA	False	NA	NA	False	AATAAA	-17	NA	152753884	152749862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753612
transcript_149238.known	chrX	-	1830	4	FSM	ENSG00000268606.6	ENST00000595583.5	1830	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	62.6578007912822	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCCTGTTCACTGGCTC	NA	False	NA	NA	False	AATAAA	-4	NA	152753878	152749875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152752393_152752514_152753787
transcript_14924.known	chr1	+	2866	15	FSM	ENSG00000163050.18	ENST00000366777.4	2866	15	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_7	25.431781498827	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCGCGTGTACCCTCTT	226936860	True	NA	22	True	AATAAA	-19	NA	226940293	226987544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_226940400_226961376_226961563_226964999_226965411_226965670_226965738_226977448_226977524_226982026_226982150_226982677_226982764_226982893_226983035_226983551_226983634_226983760_226983855_226984093_226984236_226984547_226984656_226984875_226984942_226985253_226985341_226986452
transcript_149240.known	chrX	-	1728	3	FSM	ENSG00000268606.6	ENST00000611674.4	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	91.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152751508_152751575_152753787
transcript_149241.known	chrX	-	1662	2	FSM	ENSG00000268606.6	ENST00000598543.5	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGCTCATTTCTTTACCA	NA	False	NA	NA	False	AATAAA	-16	NA	152753884	152749863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152751429_152753787
transcript_149248.known	chrX	+	789	5	FSM	ENSG00000268916.6	ENST00000617158.4	789	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9380332738623	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTGTGTGTCTC	NA	False	NA	NA	False	AATAAA	-21	NA	152753920	152760222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152753982_152755154_152755215_152758906_152759022_152759475_152759649_152759842
transcript_149249.nnic	chrX	+	849	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_4	31.767711595266	407	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753886	152760219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759482_152759685_152759842
transcript_149254.nnic	chrX	+	788	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	59.5036763570118	314	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753925	152760219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_152754011_152755154_152755215_152758906_152759022_152759482_152759634_152759842
transcript_149255.nnic	chrX	+	839	5	NNC	ENSG00000268916.6	novel	789	5	NA	NA	5	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	47.2175814713121	225	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753925	152760219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_152754011_152755154_152755215_152758906_152759022_152759482_152759685_152759842
transcript_149257.nnic	chrX	+	650	4	NIC	ENSG00000268916.6	novel	789	5	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	55.1744707470966	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152753883	152760219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_152753982_152755154_152755215_152758906_152759022_152759842
transcript_149266.known	chrX	+	844	2	FSM	ENSG00000268916.6	ENST00000599845.3	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152759217	152760219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152759685_152759842
transcript_149267.known	chrX	+	793	2	FSM	ENSG00000268916.6	ENST00000638835.1	793	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGTGTGTCTGTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	152759217	152760219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152759634_152759842
transcript_149268.known	chrX	-	1740	3	FSM	ENSG00000197172.11	ENST00000329342.10	1682	3	-58	0	-31	0	multi-exon	FALSE	canonical	0	0	junction_2	2	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTCGTTTCTTTTCCGT	NA	False	NA	NA	False	AATAAA	-17	NA	152769747	152766135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152767716_152767795_152767862_152769653
transcript_14927.known	chr1	+	929	6	FSM	ENSG00000181450.18	ENST00000608949.5	929	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	21.1849002829846	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAACCCTTAAAGTTAA	227558690	True	NA	NA	False	AAAAAG	-26	NA	227563542	227677443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227650955_227651077_227654335_227654477_227677178
transcript_149272.known	chrX	-	1413	5	FSM	ENSG00000147400.10	ENST00000370277.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_2	26.9478663348325	1694	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGAATTTATTTGC	NA	False	NA	2	True	NA	NA	NA	152830757	152826993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_152827931_152828536_152828675_152829148_152829278_152829601_152829761_152830707
transcript_14928.known	chr1	+	533	5	FSM	ENSG00000181450.18	ENST00000465266.1	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	13.3486890742125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAGACCTTTTGCCAGAG	227558698	True	NA	NA	False	NA	NA	NA	227563550	227654353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227650955_227651077_227654335
transcript_149284.known	chrX	+	1630	9	FSM	ENSG00000147383.11	ENST00000440023.5	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	123.628918037003	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTGTCTCTCTGTTTA	152825846	True	NA	30	True	NA	NA	NA	152830966	152869363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152831118_152831633_152831701_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_149290.known	chrX	+	1833	8	FSM	ENSG00000147383.11	ENST00000370274.8	1833	8	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_4	35.7879240834682	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCGTGCCTGCCTGCA	152825942	True	NA	NA	False	NA	NA	NA	152831062	152869729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_152831118_152846281_152846433_152850264_152850424_152858769_152858917_152862595_152862725_152865818_152865962_152867570_152867674_152868783
transcript_149298.known	chrX	+	2353	8	FSM	ENSG00000182492.16	ENST00000331595.9	2353	8	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	3.18157963590287	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCGTGCGCTGCTCCTGT	153494803	True	NA	8	True	ATTAAA	-19	NA	153494979	153509546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153495114_153504620_153504870_153505237_153505351_153505862_153506077_153506528_153506640_153506829_153506924_153507046_153507186_153508247
transcript_149301.known	chrX	-	1306	10	FSM	ENSG00000213397.12	ENST00000370211.10	1306	10	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_2	40.964603811487	2031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGCCTCCAGCCTGCT	NA	False	NA	-32	True	AAGAAA	-15	NA	153470576	153447667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153447910_153454393_153454509_153455541_153455767_153456264_153456365_153456492_153456652_153457136_153457229_153462609_153462672_153464987_153465056_153469145_153469262_153470449
transcript_149302.known	chrX	-	843	5	FSM	ENSG00000213397.12	ENST00000435662.1	843	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	283.176071552665	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCAGTTGCCTCCAGCCTG	NA	False	NA	-34	True	AAGAAA	-13	NA	153456350	153447669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153447910_153454393_153454509_153454876_153455054_153455541_153455767_153456264
transcript_149303.known	chrX	-	1253	5	FSM	ENSG00000262919.8	ENST00000576892.8	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	31.2119768678628	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGACCCTTGGCTTTGCT	NA	False	NA	-5	True	AATAAA	-17	NA	153599139	153587924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153588455_153592505_153592734_153594546_153594680_153596003_153596188_153598961
transcript_149304.nnic	chrX	+	437	2	NNC	ENSG00000260081.2	novel	2607	2	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	153599173	True	NA	18	True	AATAAA	-30	NA	153599335	153599893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_153599572_153599692
transcript_149306.known	chrX	+	554	1	FSM	ENSG00000260081.2	ENST00000562749.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	131	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGGTATTTACCATCTCA	153599177	True	NA	18	True	AATAAA	-30	NA	153599339	153599893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153599300_153599900
transcript_149307.known	chrX	-	1473	12	FSM	ENSG00000130822.16	ENST00000340888.8	1473	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_11	6.96745682049444	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153673813	153669732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153673779
transcript_149309.nic	chrX	-	1712	12	NIC	ENSG00000130822.16	novel	1473	12	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_6	6.57945713553536	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCAGTGGTGACCTGGG	NA	False	NA	-13	True	AATAAA	-15	NA	153686773	153669732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_153670131_153670449_153670595_153670743_153670832_153670917_153670997_153671077_153671191_153671284_153671361_153671548_153671673_153671879_153672019_153672125_153672201_153672565_153672698_153673008_153673079_153686500
transcript_14932.known	chr1	+	8543	4	FSM	ENSG00000181450.18	ENST00000343776.10	8543	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	0.942809041582063	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTTGTTTTCTTTAACA	227558703	True	NA	18	True	AATAAA	-18	NA	227563555	227662461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227646543_227646671_227650955_227651077_227654335
transcript_149326.known	chrX	-	1789	8	FSM	ENSG00000185825.17	ENST00000458587.8	1789	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_7	981.915100864694	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724066	153700491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507
transcript_149330.known	chrX	-	1350	8	FSM	ENSG00000185825.17	ENST00000672675.1	1350	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	999.452829894274	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACGTGGTGCGGTGTGTGA	NA	False	NA	-9	True	AATAAA	-15	NA	153724388	153700499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724260
transcript_149335.known	chrX	-	1284	8	FSM	ENSG00000185825.17	ENST00000345046.12	1284	8	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	183.439697036873	13618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGTGTGACTGCAGCT	NA	False	NA	-1	True	AATAAA	-23	NA	153724387	153700491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_149336.known	chrX	-	1175	8	FSM	ENSG00000185825.17	ENST00000645377.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1009.72992954168	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGCGGTGTGTGACTG	NA	False	NA	-6	True	AATAAA	-18	NA	153724388	153700496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153703039_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153724333
transcript_149337.known	chrX	-	1433	9	FSM	ENSG00000185825.17	ENST00000647529.1	1433	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1216.93615665531	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTGCGGTGTGTGACTGC	NA	False	NA	-5	True	AATAAA	-19	NA	153724435	153700495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153700976_153702006_153702108_153702934_153703059_153703958_153704095_153715541_153715690_153720871_153720973_153723152_153723289_153723507_153723613_153724333
transcript_149338.known	chrX	+	1016	2	FSM	ENSG00000101986.12	ENST00000370129.4	1016	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGTTGTTTTTGTTTGT	153725806	False	NA	2	True	ATTAAA	-17	NA	153725816	153729897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153726167_153729231
transcript_14935.known	chr1	+	798	4	FSM	ENSG00000181450.18	ENST00000440339.1	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	9.39266853573691	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCATACTGGAGAGAAAC	227558727	True	NA	NA	False	NA	NA	NA	227563579	227654768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227563725_227582513_227582607_227646543_227646671_227654335
transcript_149358.known	chrX	+	745	7	FSM	ENSG00000180879.14	ENST00000370087.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	805.675010300197	4395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153793926	False	NA	44	True	AATAAA	-27	NA	153794190	153798498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794335_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_149360.known	chrX	+	1671	7	FSM	ENSG00000180879.14	ENST00000320857.7	1671	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	787.357394495452	1467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	NA	False	NA	44	True	AATAAA	-27	NA	153793515	153798498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794586_153794673_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_149365.known	chrX	+	785	7	FSM	ENSG00000180879.14	ENST00000471880.5	785	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	998.602092371576	982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153775870	True	NA	39	True	AATAAA	-22	NA	153794678	153798493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794755_153795662_153795862_153796438_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_14937.nic	chr1	+	609	3	ISM	ENSG00000181450.18	ENST00000465266.1	533	5	-35	7503	-27	-7503	5prime_fragment	FALSE	canonical	3	53	junction_2	5.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAATTTTAAGGTGGTCT	227558663	True	NA	NA	False	AATAAA	-24	NA	227563515	227646850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_227563725_227582513_227582607_227646543
transcript_149375.known	chrX	+	608	6	FSM	ENSG00000180879.14	ENST00000370086.8	608	6	0	0	0	0	multi-exon	FALSE	canonical	3	2000	junction_1	160.068735235835	8892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGCTGCTGGCTTGCG	153775859	True	NA	45	True	AATAAA	-28	NA	153794667	153798499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794755_153796433_153796553_153797457_153797533_153797724_153797815_153798070_153798137_153798328
transcript_149376.known	chrX	-	1335	13	FSM	ENSG00000067829.20	ENST00000217901.10	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_12	27.0630693422276	1291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTGGCGTGGGCCTCCCT	NA	False	NA	-34	True	AATAAA	-15	NA	153794375	153785767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153785974_153786211_153786273_153786354_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_149377.known	chrX	+	526	5	FSM	ENSG00000180879.14	ENST00000370085.3	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	867.621569291589	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGGCTGCTGGCTTGC	153775865	True	NA	44	True	AATAAA	-27	NA	153794673	153798498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153794755_153796433_153796553_153797724_153797815_153798070_153798137_153798328
transcript_149378.known	chrX	+	2482	4	FSM	ENSG00000180879.14	ENST00000460616.5	2482	4	0	0	0	0	multi-exon	FALSE	canonical	3	2083	junction_3	145.122936390726	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGACCTGGGGCTGCTGG	153775850	True	NA	39	True	AATAAA	-22	NA	153794658	153798493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153796553_153797457_153797533_153797724_153797815_153798070
transcript_149379.known	chrX	-	1662	11	FSM	ENSG00000067829.20	ENST00000370093.5	1662	11	0	0	0	0	multi-exon	TRUE	canonical	3	312	junction_10	20.2901453912977	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGGCGTGGGCCTCCCTC	NA	False	NA	-33	True	AATAAA	-16	NA	153794381	153785766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153786450_153786800_153786948_153787050_153787154_153787463_153787598_153787822_153787956_153788074_153788136_153789711_153789825_153790194_153790293_153790563_153790576_153790809_153790852_153794245
transcript_149391.nnic	chrX	-	587	3	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	1	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153844942	153841260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_153841480_153843961_153844098_153844710
transcript_149394.nnic	chrX	-	633	2	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	93	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCCATAAATGTCTTT	NA	False	NA	NA	False	AGTAAA	-20	NA	153844946	153841082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_153841480_153844710
transcript_149396.nnic	chrX	-	455	2	Antisense	novelGene_ENSG00000184844.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	23	junction_1	0	106	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCACCCATATTTAATTCT	NA	False	NA	-4	True	AATAAA	-21	NA	153844946	153841260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrX_-_153841480_153844710
transcript_149398.known	chrX	-	3372	23	FSM	ENSG00000089820.16	ENST00000370028.7	3372	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	40.9548481474033	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCCAGCTCTCTGTCT	NA	False	NA	-8	True	CATAAA	-22	NA	153926260	153907375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153919566_153919687_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_149399.known	chrX	-	3254	22	FSM	ENSG00000089820.16	ENST00000350060.10	3254	22	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_15	18.7371119727498	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGAGCCAGCTCTCTGT	NA	False	NA	-10	True	CATAAA	-20	NA	153926264	153907377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153907963_153909069_153909170_153909442_153909536_153909740_153909925_153910011_153910086_153910170_153910405_153910505_153910612_153910699_153910835_153910921_153911000_153911128_153911190_153912699_153912803_153913023_153913052_153913217_153913303_153913408_153913601_153913777_153913880_153918831_153919054_153919154_153919284_153920625_153920809_153921096_153921160_153921364_153921528_153921604_153921810_153926135
transcript_1494.known	chr1	+	538	3	FSM	ENSG00000171735.19	ENST00000490738.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	3	1083	junction_1	2282.5	2825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTAATGAGTGCATTTCC	6761979	True	NA	49	True	AATAAA	-34	NA	6785453	6872053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6825091_6825211_6871756
transcript_149403.known	chrX	-	1603	8	FSM	ENSG00000102030.16	ENST00000464845.6	1603	8	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_3	43.4111807285277	1505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCCTGTCTGTGTTGTA	NA	False	NA	-4	True	NA	NA	NA	153935037	153929224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932116_153932315_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_149404.known	chrX	-	1080	7	FSM	ENSG00000102030.16	ENST00000466877.5	1080	7	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_2	39.7425744287184	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAACTTTGTGTGTGAGCG	NA	False	NA	-16	True	AATAAA	-18	NA	153935015	153929925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153930224_153930762_153930848_153932070_153932432_153932538_153932585_153933942_153934002_153934376_153934476_153934883
transcript_149405.known	chrX	-	573	3	FSM	ENSG00000102030.16	ENST00000478177.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	48	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCGCCCAGGCTGG	NA	False	NA	NA	False	NA	NA	NA	153935015	153933659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153934002_153934376_153934476_153934883
transcript_149408.known	chrX	-	1304	11	FSM	ENSG00000102032.13	ENST00000423624.5	1304	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.74699879903904	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTGAGTCCGCTCCACCT	NA	False	NA	-17	True	NA	NA	NA	153944626	153935285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_149411.nic	chrX	-	1383	6	ISM	ENSG00000102032.13	ENST00000423624.5	1304	11	-61	6954	0	5	5prime_fragment	FALSE	canonical	0	0	junction_5	4.1182520563948	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAACAACAACTTGC	NA	False	NA	NA	False	NA	NA	NA	153944687	153942239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrX_-_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944579
transcript_149413.known	chrX	-	1334	11	FSM	ENSG00000102032.13	ENST00000393700.8	1334	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.40734500748016	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCGGCTGTGCGCGCGTC	NA	False	NA	0	True	AATAAA	-17	NA	153944643	153935268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_153935405_153935488_153935577_153940101_153940234_153941477_153941654_153941949_153942032_153942854_153943080_153943545_153943719_153943894_153943971_153944079_153944156_153944308_153944419_153944583
transcript_149414.known	chrX	+	1452	2	FSM	ENSG00000177854.8	ENST00000369982.5	1452	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATCGTCTGGAGTATCTT	153972507	True	NA	6	True	NA	NA	NA	153972753	153983194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153972861_153981849
transcript_149415.known	chrX	+	440	2	FSM	ENSG00000177854.8	ENST00000425274.1	440	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGGCTGTCGTGGCTGCA	153972611	False	NA	NA	False	NA	NA	NA	153972857	153982260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_153972887_153981849
transcript_149416.known	chrX	-	1712	5	FSM	ENSG00000169057.24	ENST00000628176.2	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.0081514516721	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAACTTAGAGTTTCGTGG	NA	False	NA	NA	False	AATAAA	-21	NA	154097737	154030238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154092183_154092308_154097603
transcript_149417.known	chrX	-	10467	4	FSM	ENSG00000169057.24	ENST00000303391.11	10467	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	23.4568161143456	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	NA	False	NA	-3	True	GATAAA	-18	NA	154097717	154021572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031451_154032206_154032558_154092183_154092308_154097603
transcript_149418.known	chrX	-	1174	4	FSM	ENSG00000169057.24	ENST00000407218.5	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	52.2642856600524	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCAGCGTCTGCAAAG	NA	False	NA	NA	False	NA	NA	NA	154097689	154030604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031287_154031395_154031451_154032206_154032558_154097603
transcript_149419.known	chrX	-	10343	3	FSM	ENSG00000169057.24	ENST00000453960.7	10343	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	33	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGTCTGGGCTTTCAT	NA	False	NA	-3	True	GATAAA	-18	NA	154097717	154021572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154031451_154032206_154032558_154097603
transcript_14942.known	chr1	+	1541	5	FSM	ENSG00000143740.15	ENST00000680695.1	1541	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	162.712937408185	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227728378	True	NA	-3	True	NA	NA	NA	227728706	227781208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227731584_227731748_227758994_227759486_227766958_227767084_227780526
transcript_149427.known	chrX	+	1114	6	FSM	ENSG00000102119.12	ENST00000684633.1	1114	6	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_1	101.286524276431	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCTTGGGGCTCCAGGA	154367874	False	NA	69	True	NA	NA	NA	154379508	154381574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379563_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_149428.known	chrX	+	798	6	FSM	ENSG00000102119.12	ENST00000684082.1	798	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.605815976428	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGGGCAGGGGCAGG	154367850	False	NA	NA	False	NA	NA	NA	154379484	154381273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380276_154380368_154380752_154380803_154380881
transcript_149429.known	chrX	+	946	6	FSM	ENSG00000102119.12	ENST00000428228.5	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	102.47028837668	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGCAGGGGCTTTATGT	154367726	True	NA	NA	False	NA	NA	NA	154379360	154381283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379538_154379689_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_14943.known	chr1	+	2552	5	FSM	ENSG00000143740.15	ENST00000680992.1	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	135.238677899483	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACAGCCCAGGGAGCTCT	227728359	True	NA	NA	False	NA	NA	NA	227728687	227781821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_149430.known	chrX	+	501	5	FSM	ENSG00000102119.12	ENST00000468294.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_4	15.3195136998535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGCCGGGACAGTGCCTA	154367890	False	NA	NA	False	NA	NA	NA	154379524	154380894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380020_154380233_154380368_154380752
transcript_149431.known	chrX	+	1281	5	FSM	ENSG00000102119.12	ENST00000683576.1	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	17.1227188261678	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTTGGCTCTTCCTGGAG	154367874	False	NA	18	True	AATAAA	-19	NA	154379508	154381523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752_154380803_154380881
transcript_149433.known	chrX	+	1284	4	FSM	ENSG00000102119.12	ENST00000486738.5	1284	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_3	13.4412301024373	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGGGGCAGGGGCTTT	154367706	True	NA	NA	False	NA	NA	NA	154379340	154381279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941_154380368_154380752
transcript_149435.known	chrX	+	765	3	FSM	ENSG00000102119.12	ENST00000494443.5	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGGGCCTCCGGGGAG	154367793	False	NA	NA	False	GATAAA	-29	NA	154379427	154380462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379567_154379689_154379795_154379941
transcript_149436.known	chrX	+	832	5	FSM	ENSG00000102119.12	ENST00000492448.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_4	18.6731759484026	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGGGGCAGGGGCTTTAT	154379609	False	NA	NA	False	NA	NA	NA	154379624	154381281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154379795_154379941_154380020_154380233_154380368_154380752_154380803_154380881
transcript_149437.known	chrX	-	3008	10	FSM	ENSG00000013563.14	ENST00000369809.5	3008	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	17.7979052727776	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCCCTCTTGGTCCGCAT	NA	False	NA	NA	False	AATAAA	-26	NA	154412090	154401237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154409417_154409676_154411890
transcript_149440.known	chrX	-	2249	9	FSM	ENSG00000013563.14	ENST00000309585.9	2249	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	17.5779513880315	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAAATGGCTGTAAACTG	NA	False	NA	NA	False	AATAAA	-20	NA	154412112	154401760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111_154409197_154411890
transcript_149447.known	chrX	-	2610	8	FSM	ENSG00000013563.14	ENST00000369807.6	2610	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	6.5121550400237	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTCTTGGTCCGCATGT	NA	False	NA	NA	False	AATAAA	-28	NA	154409254	154401235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154402842_154402941_154403191_154403268_154403382_154403521_154403623_154404827_154404915_154404994_154405084_154405433_154405656_154409111
transcript_14945.known	chr1	+	1397	5	FSM	ENSG00000143740.15	ENST00000478768.3	1397	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_4	121.004906925298	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGTGTCTCCCTAGTACT	227732483	True	NA	8	True	AATGAA	-20	NA	227735434	227770744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227770570
transcript_14946.known	chr1	+	1923	5	FSM	ENSG00000143740.15	ENST00000617596.5	1923	5	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	49.443781206538	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227732483	True	NA	15	True	AATAAA	-18	NA	227735434	227781226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227735500_227747691_227748234_227758994_227759486_227766958_227767084_227780526
transcript_149478.known	chrX	+	748	6	FSM	ENSG00000147403.18	ENST00000406022.6	748	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6965.19039222906	26759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACCTATGTCTTTGTATC	154398809	False	NA	22	True	AATAAA	-13	NA	154398889	154400909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398961_154399337_154399397_154399486_154399595_154399802_154399942_154400463_154400627_154400701
transcript_14949.known	chr1	+	1446	4	FSM	ENSG00000143740.15	ENST00000366760.5	1446	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	150.906151851628	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227728328	True	NA	15	True	AATAAA	-18	NA	227728656	227781226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227758994_227759486_227766958_227767084_227780526
transcript_149490.known	chrX	+	585	6	FSM	ENSG00000147403.18	ENST00000458500.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_5	6777.10345206564	7653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATCTACATTCT	154149298	True	NA	30	True	AATAAA	-21	NA	154398377	154400917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398395_154398496_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400701
transcript_149491.known	chrX	+	802	5	FSM	ENSG00000147403.18	ENST00000467168.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	399.40103592755	4032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154398416	True	NA	26	True	AATAAA	-17	NA	154398496	154400913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154399942_154400463
transcript_149492.known	chrX	+	839	5	FSM	ENSG00000147403.18	ENST00000485196.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_4	451.126645189574	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCCTCTGGACAAGTGGC	154149299	True	NA	-70	True	NA	NA	NA	154398378	154400817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399595_154399802_154399942_154400463_154400627_154400701
transcript_149493.known	chrX	+	1731	2	FSM	ENSG00000147403.18	ENST00000482732.1	1731	2	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154149308	True	NA	26	True	AATAAA	-17	NA	154398387	154400913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337
transcript_149494.known	chrX	+	1369	5	FSM	ENSG00000147403.18	ENST00000491035.5	1369	5	0	0	0	0	multi-exon	FALSE	canonical	3	16930	junction_4	455.263934438036	3099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCTTTGTATCTACA	154149297	True	NA	26	True	AATAAA	-17	NA	154398376	154400913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399397_154399486_154399595_154399802_154400627_154400701
transcript_149495.known	chrX	+	1519	3	FSM	ENSG00000147403.18	ENST00000489200.5	1519	3	0	0	0	0	multi-exon	FALSE	canonical	3	17060	junction_1	516.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTCCTGTCCACCTAT	154149297	True	NA	11	True	AATAAA	-2	NA	154398376	154400898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154398543_154399337_154399595_154399802
transcript_149497.known	chrX	-	598	2	FSM	ENSG00000197180.3	ENST00000360656.3	633	2	33	2	33	-2	multi-exon	FALSE	canonical	3	32	junction_1	0	193	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCTCTGGCACTTTGTT	NA	False	NA	4	True	AATAAA	-21	NA	154428479	154424379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154424626_154428127
transcript_149498.known	chrX	+	2054	10	FSM	ENSG00000071553.18	ENST00000369762.7	2054	10	0	0	0	0	multi-exon	FALSE	canonical	1	185	junction_7	121.93714227694	1055	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCCTCTTGTCGCTCA	154418953	True	NA	16	True	AATAAA	-21	NA	154428676	154436516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154428854_154429047_154429175_154431829_154431905_154432265_154432460_154432930_154432972_154433634_154433721_154434207_154434447_154435138_154435187_154435273_154435506_154435681
transcript_149501.known	chrX	+	2240	11	FSM	ENSG00000203879.12	ENST00000447750.7	2240	11	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	86.5632716572104	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154428250	True	NA	16	True	AATAAA	-17	NA	154437153	154443467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440140_154440374_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_149503.nic	chrX	+	2487	10	NIC	ENSG00000203879.12	novel	2240	11	NA	NA	-12	0	intron_retention	FALSE	canonical	3	934	junction_5	59.452024438841	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGGATCTTGATGGTTA	154428238	True	NA	16	True	AATAAA	-17	NA	154437141	154443467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005_154439141_154439940_154440507_154441095_154441196_154441622_154441795_154442110_154442256_154442373_154442429_154442519
transcript_149507.known	chrX	+	600	4	FSM	ENSG00000203879.12	ENST00000475976.5	600	4	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_1	16.5193489244852	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGTGAAGGACCAGAGAGG	154428250	True	NA	NA	False	NA	NA	NA	154437153	154439251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154437300_154438522_154438631_154438764_154438865_154439005
transcript_149509.known	chrX	+	1337	13	FSM	ENSG00000071859.15	ENST00000393600.8	1337	13	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_3	45.0555213042752	355	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTCGGACCAAATTC	154440356	True	NA	37	True	NA	NA	NA	154444140	154450654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154444347_154445632_154445718_154445811_154445912_154446414_154446561_154448483_154448561_154448689_154448757_154448892_154448955_154449220_154449298_154449680_154449736_154449882_154449932_154450028_154450100_154450208_154450320_154450423
transcript_14951.known	chr1	+	1363	4	FSM	ENSG00000143740.15	ENST00000681929.1	1363	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	144.319860803086	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAATGCTGGCTTCAGA	227732483	True	NA	-3	True	NA	NA	NA	227735434	227781208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227735500_227758994_227759486_227766958_227767084_227780526
transcript_149512.known	chrX	-	949	3	FSM	ENSG00000196976.8	ENST00000357360.5	967	3	24	-6	24	6	multi-exon	FALSE	canonical	3	1702	junction_1	76.5	426	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTTTATTTGCAGCT	NA	False	NA	-4	True	AATAAA	-19	NA	154479257	154477768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154478059_154478282_154478412_154478727
transcript_149513.known	chrX	-	2327	4	FSM	ENSG00000102178.13	ENST00000369660.9	2327	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	17.7826382244655	211	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATTGTGCGTCCAATCA	NA	False	NA	-4	True	AATAAA	-22	NA	154486615	154483716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154485650_154485770_154485980_154486227_154486334_154486536
transcript_149515.known	chrX	-	1862	3	FSM	ENSG00000126903.16	ENST00000393587.4	1862	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	51.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAATATATTTCAATAAA	NA	False	NA	-38	True	NA	NA	NA	154490663	154487342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154489083_154490306_154490359_154490593
transcript_149516.known	chrX	-	1815	11	FSM	ENSG00000071889.17	ENST00000322269.10	1815	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	34.0293990543471	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	NA	False	NA	0	True	AATAAA	-29	NA	154516242	154506159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759_154515813_154515909
transcript_149519.known	chrX	-	1901	10	FSM	ENSG00000071889.17	ENST00000621967.4	1901	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_8	33.4313374094973	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516242	154506170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512313_154512412_154512822_154512937_154515759
transcript_14952.known	chr1	+	2375	3	FSM	ENSG00000143740.15	ENST00000480897.5	2375	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	227728210	True	NA	NA	False	NA	NA	NA	227728538	227734352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_227728787_227731584_227731748_227732388
transcript_149520.known	chrX	-	1712	10	FSM	ENSG00000071889.17	ENST00000359889.9	1712	10	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_9	20.418461750262	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTTGTCAGTGCGGA	NA	False	NA	1	True	AATAAA	-30	NA	154516236	154506158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_149521.known	chrX	-	1521	10	FSM	ENSG00000071889.17	ENST00000369643.5	1521	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	31.2579866337399	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516116	154506170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515968
transcript_149523.known	chrX	-	1359	10	FSM	ENSG00000071889.17	ENST00000369641.7	1359	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	31.3514526018638	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCCATTCCTCACGCC	NA	False	NA	NA	False	NA	NA	NA	154516238	154506534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507883_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759_154515813_154515909
transcript_149525.known	chrX	-	1793	9	FSM	ENSG00000071889.17	ENST00000447601.7	1793	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	11.1908165475089	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGCCTTCAGATGCTGT	NA	False	NA	-11	True	AATAAA	-18	NA	154516232	154506170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_149526.known	chrX	-	1041	9	FSM	ENSG00000071889.17	ENST00000393572.5	1041	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	34.4564943080401	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTATGGGGGCTGCAGGGGG	NA	False	NA	NA	False	GGGGCT	-40	NA	154516160	154506639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154507810_154507862_154508288_154508348_154508473_154508598_154511847_154511872_154515759_154515813_154515909
transcript_149532.known	chrX	-	1763	8	FSM	ENSG00000071889.17	ENST00000419205.5	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	30.1587635755872	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGCTGTTGTCAGTGCGG	NA	False	NA	0	True	AATAAA	-29	NA	154516242	154506159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154506907_154507202_154507330_154507405_154507491_154508288_154508348_154508473_154508598_154511847_154511872_154512822_154512937_154515759
transcript_149535.known	chrX	-	2223	13	FSM	ENSG00000160211.19	ENST00000393562.10	2223	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	7.77951369516973	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGTCCCCTTGTCATT	NA	False	NA	-7	True	ATTAAA	-14	NA	154546846	154531390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154546788
transcript_149536.known	chrX	-	1661	13	FSM	ENSG00000160211.19	ENST00000393564.6	1661	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_12	15.7762127549323	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGGCACCCACCTCCA	NA	False	NA	NA	False	NA	NA	NA	154547572	154531999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154532091_154532187_154532281_154532385_154532463_154532566_154532803_154532941_154533129_154533575_154533670_154534034_154534161_154534337_154534497_154535167_154535386_154535936_154536046_154536140_154536179_154546035_154546164_154547467
transcript_149538.known	chrX	+	1949	10	FSM	ENSG00000269335.7	ENST00000617207.4	1949	10	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	39.3430621991969	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTGTGCATTAGTCGTGC	154546332	True	NA	NA	False	AGTAAA	-3	NA	154547640	154565033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154547746_154551987_154552190_154556164_154556377_154558534_154558651_154560406_154560560_154561687_154561785_154562809_154562954_154563558_154563702_154563958_154564021_154564318
transcript_149549.known	chrX	+	2469	15	FSM	ENSG00000130826.18	ENST00000369550.10	2469	15	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	74.0279869856182	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTATGTTTGTTTTCT	154751495	True	NA	24	True	ATTAAA	-36	NA	154762863	154777689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154774706_154775194_154775274_154776186_154776325_154776798
transcript_149550.known	chrX	+	3079	14	FSM	ENSG00000130826.18	ENST00000620277.4	3079	14	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	76.6275863005518	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTTTATGTTTGTTTTC	154762543	True	NA	23	True	ATTAAA	-35	NA	154762741	154777688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154762982_154764898_154764967_154765443_154765531_154765906_154765999_154766215_154766401_154766996_154767062_154767255_154767383_154768301_154768433_154769166_154769311_154770758_154770880_154773130_154773250_154774601_154775274_154776186_154776325_154776798
transcript_149552.known	chrX	-	2006	12	FSM	ENSG00000130830.15	ENST00000369534.8	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	13.4490160628148	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805485	154778683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154789953_154790023_154790982_154791069_154791768_154791848_154792141_154792286_154805271
transcript_149554.nic	chrX	-	1635	8	NIC	ENSG00000130830.15	novel	2006	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	28.8394570981197	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGTAACTCTGGGTT	NA	False	NA	0	True	AATAAA	-22	NA	154805492	154778683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrX_-_154779354_154781238_154781314_154781599_154781803_154783426_154783508_154784027_154784109_154785050_154785158_154786203_154786401_154805271
transcript_149556.known	chrX	-	791	6	FSM	ENSG00000185010.15	ENST00000423959.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.67332005306815	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCTCTGCCAGGTATGT	NA	False	NA	NA	False	NA	NA	NA	155026940	154984700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154984804_154987236_154987306_154992935_154993149_154996972_154997096_154999478_154999601_155026779
transcript_149557.known	chrX	-	2620	5	FSM	ENSG00000185010.15	ENST00000330287.10	2620	5	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	2.69258240356725	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTGAGAATTGTGTTT	NA	False	NA	NA	False	AATAAA	-22	NA	154886317	154835787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_154837753_154860431_154860609_154861717_154861867_154863082_154863228_154886133
transcript_149558.known	chrX	+	1707	1	FSM	ENSG00000288722.1	ENST00000610495.2	1707	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGGTTTTGGTGTCCGT	154886311	False	NA	NA	False	GATAAA	-20	NA	154886354	154888061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_154886400_154888100
transcript_14956.nnic	chr1	+	898	3	NIC	ENSG00000143740.15	novel	2362	5	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	170.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGGTTTTTGAAGATGGG	227732475	True	NA	15	True	AATAAA	-18	NA	227735426	227781226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_227735500_227766958_227767084_227780526
transcript_149561.known	chrX	+	6297	5	FSM	ENSG00000165775.18	ENST00000369498.8	6297	5	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	20.6926919466753	1585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTGTTATTATTAACAC	155024646	True	NA	NA	False	ATTAAA	-15	NA	155026843	155060304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155027072_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_149563.known	chrX	+	666	5	FSM	ENSG00000165775.18	ENST00000484175.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	209.679964469665	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATGTTCATTGTTCCTG	155027019	False	NA	NA	False	NA	NA	NA	155027152	155054681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155027373_155033402_155033554_155046508_155046585_155051669_155051802_155054594
transcript_149565.known	chrX	+	871	5	FSM	ENSG00000165775.18	ENST00000456179.1	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	247.51717112152	599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTTGGTATCTTGGT	155033292	False	NA	-3	True	AATACA	-17	NA	155033425	155055106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155033554_155046508_155046585_155047368_155047392_155051669_155051802_155054594
transcript_149566.known	chrX	+	2846	12	FSM	ENSG00000185515.16	ENST00000369462.5	2846	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	114.665377339154	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATATTATTGTCAATGTCT	155067456	True	NA	20	True	AATAAA	-23	NA	155071502	155123074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_14957.known	chr1	-	2484	6	FSM	ENSG00000081692.13	ENST00000620518.5	2484	6	0	0	0	0	multi-exon	TRUE	canonical	3	104	junction_1	11.3736537664903	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCCAGGGACCTGTA	-227733435	True	NA	-1	True	AATGAA	-15	NA	227735302	227731190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_227732677_227732880_227733028_227733413_227733682_227733906_227734033_227734650_227734817_227735011
transcript_149571.known	chrX	+	2769	11	FSM	ENSG00000185515.16	ENST00000330045.12	2769	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.9946021071747	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATTGTCAATGTCTTGG	155067461	True	NA	23	True	AATAAA	-26	NA	155071507	155123077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_149581.nnic	chrX	+	768	5	NNC	ENSG00000185515.16	novel	2641	10	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	128.399766354928	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTGATTGCTGAATATCA	NA	False	NA	NA	False	ATTAAA	-15	NA	155071395	155078930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077290_155078609
transcript_149588.known	chrX	-	881	3	FSM	ENSG00000182712.16	ENST00000369484.8	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	26	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071136	155061621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155061992_155063965_155064034_155070693
transcript_149589.nnic	chrX	-	651	3	NNC	ENSG00000182712.16	novel	881	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	81	207	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTTTTGTACTAAATG	NA	False	NA	0	True	AATAAA	-18	NA	155071176	155061621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_155061992_155063965_155064034_155070963
transcript_149590.known	chrX	+	882	10	NNC	ENSG00000185515.16	novel	1101	11	NA	NA	-4	-1168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	128.872029548696	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAGACAAAATGGGGT	155067481	True	NA	-5	True	AAGAAA	-39	NA	155071527	155120150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_155071651_155072326_155072344_155073373_155073432_155077169_155077284_155078609_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119995
transcript_149591.known	chrX	+	2694	10	FSM	ENSG00000185515.16	ENST00000453705.1	2694	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	114.74609652039	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTGATACTGAATAAAGTCT	155067485	True	NA	-18	True	AATGAA	-15	NA	155071531	155123036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155071655_155073373_155073432_155077169_155077290_155078615_155078704_155089262_155089352_155090783_155090840_155116056_155116189_155116710_155116755_155119998_155120169_155121222
transcript_149592.known	chrX	+	954	11	NNC	ENSG00000185515.16	novel	2846	12	NA	NA	-4	-1168	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	129.963110150535	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCAGGAGACAAAATGGGGT	155067481	True	NA	-5	True	AAGAAA	-39	NA	155071527	155120150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_+_155071651_155072326_155072344_155073376_155073432_155077169_155077284_155078609_155078704_155089262_155089352_155090783_155090840_155099314_155099390_155116056_155116189_155116710_155116755_155119995
transcript_149597.known	chrX	+	1616	6	FSM	ENSG00000155959.12	ENST00000286428.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_3	40.7057735462674	2454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTCTTACTATGTTT	155211594	True	NA	34	True	ATTAAA	-43	NA	155216459	155239841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155216576_155220182_155220308_155227234_155227302_155228383_155228483_155236228_155236368_155238771
transcript_149598.known	chrX	-	3413	2	FSM	ENSG00000155961.5	ENST00000369454.4	3413	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTCCAAGTGTGTGTTATA	NA	False	NA	-6	True	AGTAAA	-23	NA	155264491	155258234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155261230_155264073
transcript_149602.nnic	chrX	-	1017	6	NNC	ENSG00000155962.13	novel	2623	6	NA	NA	28807	246	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.24264068711928	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACAGGTCTTCATACTT	NA	False	NA	NA	False	CATAAA	-17	NA	155305620	155277733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_155278065_155279148_155279331_155279961_155280069_155298784_155298911_155299035_155299146_155305459
transcript_149605.known	chrX	+	591	1	FSM	ENSG00000277858.2	ENST00000354514.6	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCGCTTCAGTCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	155380708	155381299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155380700_155381300
transcript_149606.known	chrX	-	591	1	FSM	ENSG00000277745.1	ENST00000615853.1	591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCCGCTTCAGTCACTT	NA	False	NA	NA	False	AATAAA	-18	NA	155460005	155459414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155459400_155460000
transcript_14961.known	chr1	+	578	6	FSM	ENSG00000143761.16	ENST00000473949.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1379.53200760258	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGCACTCACTACGC	228053272	True	NA	NA	False	NA	NA	NA	228082790	228097894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082851_228096450_228096505_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_149616.known	chrX	-	581	2	FSM	ENSG00000185973.12	ENST00000461075.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGAATGGGTTTGTGAAT	NA	False	NA	NA	False	NA	NA	NA	155612895	155612127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155612605_155612791
transcript_149617.known	chrX	-	3952	8	FSM	ENSG00000185973.12	ENST00000334398.8	3952	8	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	30.6007869713396	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACCAGAAGTTACCACAT	NA	False	NA	NA	False	AATAAA	-24	NA	155612952	155489010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155491667_155492356_155492496_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_149618.known	chrX	-	1248	7	FSM	ENSG00000185973.12	ENST00000369439.4	1248	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	32.5819479671387	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTTTGAGATCTTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	155612877	155492534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155492701_155506897_155507135_155511672_155511793_155513985_155514266_155524455_155524633_155545095_155545278_155612791
transcript_149619.known	chrX	-	544	2	FSM	ENSG00000185973.12	ENST00000487422.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATACTTAATAGTGAGA	NA	False	NA	NA	False	AATAAA	-22	NA	155545277	155524270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_155524633_155545095
transcript_149622.known	chrX	+	2594	8	FSM	ENSG00000124333.16	ENST00000286448.12	2594	8	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	23.7770254400232	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879010	True	NA	NA	False	AATAAA	-21	NA	155881344	155943769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_149624.known	chrX	+	742	8	FSM	ENSG00000124333.16	ENST00000479687.6	742	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	80.2050942450487	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGGATTTACATG	155879023	True	NA	NA	False	NA	NA	NA	155881357	155941909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889634_155895622_155895681_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_149626.known	chrX	+	658	7	FSM	ENSG00000124333.16	ENST00000460621.6	658	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	86.8531647219733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGAGTTAAAAGCAATCC	155879043	True	NA	NA	False	AAGAAA	-42	NA	155881377	155941989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889548_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_149627.known	chrX	+	2496	7	FSM	ENSG00000124333.16	ENST00000262640.11	2496	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	86.3249674196289	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTTAGAAGTTC	155879040	True	NA	NA	False	AATAAA	-21	NA	155881374	155943769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889613_155895622_155895681_155898111_155898250_155900496_155900588_155939700_155939794_155941882
transcript_149628.known	chrX	+	696	7	FSM	ENSG00000124333.16	ENST00000488344.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	85.0588031893231	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATAGGAAAGAAGAAGTT	155879025	True	NA	NA	False	NA	NA	NA	155881359	155941944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_+_155881449_155889457_155889613_155898111_155898250_155900496_155900588_155919812_155919881_155939700_155939794_155941882
transcript_149631.nnic	chrX	-	1242	2	NNC	ENSG00000185203.12	novel	1054	2	NA	NA	-55	8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTCTTTTTTTTCCTTTA	NA	False	NA	NA	False	CATAAA	-19	NA	156016892	156014614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrX_-_156015626_156016661
transcript_149632.known	chrX	-	1054	2	FSM	ENSG00000185203.12	ENST00000399966.9	1054	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	156016837	156014622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrX_-_156015501_156016661
transcript_149636.known	chrY	-	828	1	FSM	ENSG00000184895.8	ENST00000383070.2	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	267	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTACTGGTATTTCATTT	NA	False	NA	-11	True	AATAAA	-17	NA	2787682	2786854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_2786900_2787700
transcript_14965.known	chr1	+	1840	5	FSM	ENSG00000143761.16	ENST00000272102.10	1840	5	0	0	0	0	multi-exon	FALSE	canonical	3	1992	junction_1	381.618919866403	5646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGCTCTCCAGTGCTTCCA	228053189	True	NA	17	True	AATAAA	-18	NA	228082707	228099212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082766_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_149653.known	chrY	+	1189	7	FSM	ENSG00000129824.16	ENST00000250784.13	1189	7	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_1	324.254015652338	8462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTCCCTTTTTCCTTGCT	2827547	True	NA	8	True	ATTAAA	-19	NA	2841601	2867268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_2841628_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_149661.known	chrY	+	811	7	FSM	ENSG00000129824.16	ENST00000430575.1	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	692.813045970316	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGCTGGCCACCAAACAG	2841896	False	NA	-28	True	NA	NA	NA	2841919	2866862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_2841974_2842164_2842243_2844076_2844258_2845645_2845744_2854599_2854772_2865087_2865246_2866792
transcript_14968.known	chr1	+	820	5	FSM	ENSG00000143761.16	ENST00000470558.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_1	1114.55675046181	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTTTTGTTTCCAATGA	228053270	True	NA	NA	False	NA	NA	NA	228082788	228098188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228082851_228097077_228097263_228097341_228097453_228097590_228097716_228097851
transcript_149696.nnic	chrY	-	646	4	FSM	ENSG00000206159.12	ENST00000689264.1	617	4	-32	3	-4	-3	multi-exon	FALSE	canonical	1	1	junction_1	3.55902608401044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	12421591	12378536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421439
transcript_149697.nnic	chrY	-	547	4	FSM	ENSG00000206159.12	ENST00000382965.3	534	4	-18	5	-15	-3	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTCTGCCCCCATTCT	NA	False	NA	NA	False	AATAAA	-13	NA	12421602	12378536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12378750_12406795_12406938_12420315_12420455_12421549
transcript_149699.nic	chrY	-	674	4	NIC	ENSG00000206159.12	novel	623	3	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.02768199119819	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCATTGATCTGGAAAT	NA	False	NA	NA	False	AATAAA	-39	NA	12421602	12402250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_12402591_12406795_12406938_12420315_12420455_12421549
transcript_149711.known	chrY	+	5284	4	FSM	ENSG00000114374.13	ENST00000440408.5	5284	4	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_3	156.629073503825	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATAGTGTCTAAAGCAGTG	NA	False	NA	NA	False	AATAAA	-44	NA	12662333	12692233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687463
transcript_149712.known	chrY	+	882	4	FSM	ENSG00000114374.13	ENST00000417071.1	882	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	215.810616565132	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAACTTTTTAAATTAA	12660501	True	NA	-15	True	NA	NA	NA	12662536	12688255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12662707_12664639_12664687_12686512_12686607_12687684
transcript_149713.known	chrY	-	1076	3	FSM	ENSG00000286009.2	ENST00000651143.2	1076	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAGCCCCACTTGCTCA	NA	False	NA	-26	True	ATTAAA	-18	NA	12663474	12661314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662125_12662656_12662752_12663303
transcript_149714.known	chrY	-	1023	3	FSM	ENSG00000286009.2	ENST00000656670.1	1023	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGAGCCCCACTTGCTCA	NA	False	NA	-26	True	ATTAAA	-18	NA	12663478	12661314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662125_12662656_12662752_12663360
transcript_149715.known	chrY	-	1210	3	FSM	ENSG00000286009.2	ENST00000662422.1	1210	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCCCACTTGCTCATGA	NA	False	NA	-23	True	ATTAAA	-21	NA	12663474	12661311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662125_12662525_12662752_12663303
transcript_149716.known	chrY	-	1153	3	FSM	ENSG00000286009.2	ENST00000652216.1	1153	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACTTGCTCATGATTG	NA	False	NA	-20	True	ATTAAA	-24	NA	12663474	12661308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_12662122_12662525_12662752_12663360
transcript_149718.known	chrY	+	4408	17	FSM	ENSG00000067048.17	ENST00000336079.8	4408	17	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_9	52.2673042517978	429	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTCACTTGTAGC	12891822	True	NA	18	True	AATAAA	-14	NA	12904867	12920478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_12904982_12907536_12907595_12909359_12909408_12911838_12911969_12912726_12912883_12912962_12913063_12913717_12913854_12914563_12914650_12914883_12914983_12915066_12915228_12915629_12915775_12915882_12916028_12916260_12916443_12916516_12916635_12916906_12917061_12917402_12917543_12918042
transcript_14974.known	chr1	-	1290	8	FSM	ENSG00000143793.13	ENST00000272139.5	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_4	31.5413560719437	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097944	True	NA	-8	True	AATAAA	-17	NA	228103325	228100730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228102898_228103050_228103133
transcript_149748.known	chrY	-	1539	7	FSM	ENSG00000183878.16	ENST00000382893.2	1539	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	8.04155872120988	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGAGTCTATAATTGAAT	NA	False	NA	NA	False	ATTAAA	-26	NA	13479978	13396301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_13396973_13410992_13411114_13414734_13414794_13449016_13449067_13470120_13470230_13479253_13479318_13479513
transcript_14975.nnic	chr1	-	1147	7	NIC	ENSG00000143793.13	novel	1290	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_6	125.919837815793	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097952	True	NA	-8	True	AATAAA	-17	NA	228103333	228100730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_228101255_228101338_228101474_228102079_228102166_228102309_228102383_228102477_228102561_228102642_228102689_228103133
transcript_149751.nnic	chrY	-	844	4	NNC	ENSG00000183878.16	novel	3391	19	NA	NA	39789	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	32.7448045073142	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTGTCCACGTTCCTC	NA	False	NA	-3	True	AATAAA	-24	NA	13296340	13234579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_13234827_13251016_13251188_13260277_13260405_13296041
transcript_149753.known	chrY	-	686	2	FSM	ENSG00000183878.16	ENST00000479713.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGACCGGGCTAAACCGGG	NA	False	NA	NA	False	NA	NA	NA	13479923	13479041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_13479318_13479513
transcript_149754.nnic	chrY	+	858	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1005	1629	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	35.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGTAGGATTTTACA	13702291	True	NA	11	True	AATAAA	-22	NA	13702893	13707653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13702954_13704333_13704436_13706957
transcript_149755.nnic	chrY	+	885	4	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1005	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	34.4222150491349	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13702291	True	NA	7	True	AATAAA	-18	NA	13702893	13706024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13702954_13704333_13704436_13705224_13705268_13705344
transcript_149757.nnic	chrY	+	975	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1390	-372	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTGTGAGATTGCTTGT	NA	False	NA	4	True	AAAAAG	-15	NA	13702508	13705652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13702954_13704333_13704436_13705224
transcript_149758.nnic	chrY	+	1116	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1390	-231	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTTACCTGGATATGT	NA	False	NA	8	True	AATAAA	-19	NA	13702508	13705793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13702954_13704333_13704436_13705224
transcript_149759.nnic	chrY	+	1347	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1390	0	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_2	1	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	NA	False	NA	7	True	AATAAA	-18	NA	13702508	13706024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13702954_13704333_13704436_13705224
transcript_149760.nnic	chrY	+	910	3	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-1073	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	26.5	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	NA	False	NA	7	True	AATAAA	-18	NA	13702825	13706024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13702954_13704333_13704436_13705344
transcript_149764.known	chrY	+	1337	2	FSM	ENSG00000154620.6	ENST00000284856.4	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13703824	True	NA	7	True	AATAAA	-18	NA	13703898	13706024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_13704436_13705224
transcript_149767.nnic	chrY	+	1388	2	NNC	ENSG00000154620.6	novel	1337	2	NA	NA	-171	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCTTCTAAGACCTGTAT	13703689	False	NA	7	True	AATAAA	-18	NA	13703727	13706024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_13704436_13705344
transcript_149768.known	chrY	-	510	2	FSM	ENSG00000129864.7	ENST00000250825.5	510	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	13986473	13985771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_13986147_13986338
transcript_149769.known	chrY	+	540	2	FSM	ENSG00000129862.7	ENST00000250823.5	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAGTGACTCCGTGTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	14056226	14056958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_14056392_14056583
transcript_14977.nnic	chr1	-	1074	6	NIC	ENSG00000143793.13	novel	1290	8	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	1	8	junction_5	170.008235094657	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATATCAAATTGGAAGGT	-228097952	True	NA	-8	True	AATAAA	-17	NA	228103333	228100730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_228101255_228101338_228101474_228102079_228102166_228102477_228102561_228102642_228102689_228103133
transcript_149770.known	chrY	+	7368	7	FSM	ENSG00000165246.15	ENST00000643089.1	7368	7	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	6.84754619472471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAGTATATAAAGGGTT	NA	False	NA	NA	False	AATAAA	-2	NA	14522572	14845639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14824187_14824374_14829729_14830520_14840412
transcript_149775.nic	chrY	+	1271	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_4	22.4555115728856	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	NA	False	NA	9	True	AATAAA	-23	NA	14522564	14733549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14522942_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_149783.nic	chrY	+	1080	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_4	25.2239965112589	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	14524501	False	NA	9	True	AATAAA	-23	NA	14524522	14733549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14524709_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_149784.nic	chrY	+	1287	5	NIC	ENSG00000165246.15	novel	722	4	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	27.2442654516506	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	14523881	True	NA	9	True	AATAAA	-23	NA	14524543	14733549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14524937_14622008_14622592_14719458_14719519_14723116_14723270_14733451
transcript_149786.nic	chrY	+	1160	4	NIC	ENSG00000165246.15	novel	722	4	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	22.7596133534821	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATTACACATGTTTCTTG	14520990	True	NA	9	True	AATAAA	-23	NA	14522615	14733549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_+_14522942_14622008_14622592_14723116_14723270_14733451
transcript_149795.nnic	chrY	+	597	4	Antisense	novelGene_ENSG00000252689.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0.471404520791032	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTGTGTGACGTCTTT	NA	False	NA	NA	False	AATAAA	-24	NA	16137114	16160373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_+_16137299_16154906_16154990_16156077_16156163_16160128
transcript_1498.known	chr1	+	8314	23	FSM	ENSG00000171735.19	ENST00000303635.12	8314	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1277.55304914842	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACGTGTGTGTTTTGCTTT	6761979	True	NA	18	True	ATTAAA	-22	NA	6785453	7769706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_6785576_6820180_6820251_6825091_6825211_7091303_7091372_7249490_7249627_7467829_7467902_7640399_7640554_7661725_7661867_7663352_7665200_7670910_7671038_7677598_7677734_7732447_7732600_7736343_7736541_7736930_7737010_7737254_7737571_7737958_7738483_7744834_7745023_7745844_7746092_7747709_7747782_7751198_7751393_7752458_7752534_7755637_7755669_7766458
transcript_149802.nnic	chrY	-	1217	5	NNC	ENSG00000230663.1	novel	2032	5	NA	NA	-104	-494	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	21.4636320318813	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTGTCATCTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	17579858	17553293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_17553955_17554041_17554127_17576702_17576821_17579315_17579476_17579665
transcript_149804.nnic	chrY	-	623	4	NNC	ENSG00000230663.1	novel	2032	5	NA	NA	-100	-22384	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	25.5081686262787	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	17579854	17575183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_17575368_17576702_17576793_17579315_17579476_17579665
transcript_149806.nnic	chrY	-	1410	4	NNC	ENSG00000230663.1	novel	2032	5	NA	NA	-859	-22384	at_least_one_novel_splicesite	FALSE	canonical	3	56	junction_1	3.2659863237109	205	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	17580613	17575183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_17575368_17576702_17576821_17579315_17579476_17579665
transcript_149816.nnic	chrY	+	1215	5	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-102	-494	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	21.1349828483488	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATGTGTCATCTTTGAA	NA	False	NA	NA	False	AATAAA	-19	NA	18326150	18352716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_18326342_18326530_18326691_18329190_18329309_18351883_18351969_18352055
transcript_149821.nnic	chrY	+	653	4	NNC	ENSG00000233522.1	novel	2031	5	NA	NA	-102	-22383	at_least_one_novel_splicesite	FALSE	canonical	3	55	junction_3	3.39934634239519	208	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACGGATGCACCTAAAAC	NA	False	NA	NA	False	AATAAA	-20	NA	18326150	18330827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_18326342_18326530_18326691_18329190_18329309_18330643
transcript_149887.nnic	chrY	-	651	4	NIC	ENSG00000176728.10	novel	827	5	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	21.5458168149231	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076020	18872500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_18872835_18877067_18877206_18932742_18932842_19075940
transcript_149892.known	chrY	-	615	4	FSM	ENSG00000176728.10	ENST00000670354.1	615	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.202725191719	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076008	18872500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19075940
transcript_149894.known	chrY	-	3840	8	FSM	ENSG00000176728.10	ENST00000667260.1	3840	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.6265106459282	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCATACAATACGTGACTT	NA	False	NA	NA	False	TATAAA	-4	NA	19077218	18802556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18804848_18819354_18819787_18828584_18828720_18830435_18830640_18872443_18872835_18877067_18877206_19068723_19068799_19077044
transcript_149895.known	chrY	-	640	4	FSM	ENSG00000176728.10	ENST00000667640.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.0416305603426	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19077360	18872500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19068723_19068799_19077267
transcript_149896.known	chrY	-	593	4	FSM	ENSG00000176728.10	ENST00000670243.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	21.6999743983464	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19075998	18872500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19073498_19073562_19075940
transcript_1499.known	chr1	+	2178	5	FSM	ENSG00000049245.13	ENST00000054666.11	2178	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	14.6009417504488	445	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCACCTGTGCTCCTT	7767577	True	NA	12	True	AATAAA	-17	NA	7771295	7781432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7771386_7773441_7773512_7777159_7777319_7778117_7778170_7779625
transcript_149906.nnic	chrY	-	408	4	NNC	ENSG00000176728.10	novel	615	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	19.1543438647449	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19076011	18932698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_18932842_18933356_18933476_19068723_19068799_19075940
transcript_149914.known	chrY	-	541	3	FSM	ENSG00000176728.10	ENST00000667262.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTGTTGTATCAGGTGAC	NA	False	NA	0	True	AATAAA	-15	NA	19076011	18872502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19075940
transcript_149918.nnic	chrY	-	605	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	16.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTGTTTACTTT	NA	False	NA	-1	True	AATAAA	-31	NA	19076020	18932435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_149922.known	chrY	-	978	3	FSM	ENSG00000176728.10	ENST00000669869.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	13	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGGCTTGCATGTCATTT	NA	False	NA	NA	False	AATAAA	-11	NA	19076008	18932006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18932842_19068723_19068799_19075940
transcript_149923.nnic	chrY	-	416	3	NNC	ENSG00000176728.10	novel	615	4	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	16.5	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19076094	18932698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_18932842_18933356_18933476_19075940
transcript_149930.known	chrY	-	579	3	FSM	ENSG00000176728.10	ENST00000667617.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTGTTTACTTT	NA	False	NA	-1	True	AATAAA	-31	NA	19077365	18932435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18932842_19068723_19068799_19077267
transcript_149933.known	chrY	-	515	2	FSM	ENSG00000176728.10	ENST00000331787.2	515	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19077416	18932698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18932842_19077044
transcript_149935.nnic	chrY	-	465	2	NIC	ENSG00000176728.10	novel	515	2	NA	NA	-173	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGACTTTCTGCTTGTATA	NA	False	NA	-17	True	AATAAA	-21	NA	19077589	18932698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_18932842_19077267
transcript_149936.known	chrY	-	827	5	FSM	ENSG00000176728.10	ENST00000664804.1	827	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_2	18.2671152621316	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19076029	18872500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_18932650_18932842_19068723_19068799_19075940
transcript_149937.known	chrY	-	802	3	FSM	ENSG00000176728.10	ENST00000454875.2	802	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTATCAGGTGACTG	NA	False	NA	2	True	AATAAA	-17	NA	19077374	18872500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_18872835_18877067_18877206_19077044
transcript_149939.nnic	chrY	-	1924	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCATTTGATATGTCT	NA	False	NA	NA	False	AATAAA	-15	NA	18690351	18681573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_149942.nnic	chrY	-	1399	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACAGCAGTGAAGCCA	NA	False	NA	NA	False	AATAAA	-25	NA	18690351	18682098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_149944.nnic	chrY	-	1367	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	15	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATACAGCAGTGAAGCCA	NA	False	NA	NA	False	AATAAA	-25	NA	18690339	18682098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_-_18683112_18684230_18684326_18690080
transcript_149946.nnic	chrY	-	1275	3	Antisense	novelGene_ENSG00000242153.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	27	junction_2	5	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGGAAAAAAATAGATAGTT	NA	False	NA	NA	False	AAAAAG	-7	NA	18690351	18682222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chrY_-_18683112_18684230_18684326_18690060
transcript_149958.nnic	chrY	-	622	4	NNC	ENSG00000215580.12	novel	352	4	NA	NA	-169	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	2.16024689946929	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	2	True	AATAAA	-23	NA	19567261	19555389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_19555555_19557229_19557290_19558023_19558141_19566981
transcript_149959.nnic	chrY	-	394	4	FSM	ENSG00000215580.12	ENST00000693243.1	352	4	-42	0	2	0	multi-exon	FALSE	canonical	1	6	junction_3	2.35702260395516	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	2	True	AATAAA	-23	NA	19567049	19555389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_19555555_19557229_19557290_19558039_19558141_19566981
transcript_149961.nnic	chrY	-	613	4	NNC	ENSG00000215580.12	novel	3118	4	NA	NA	-169	-628	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3.68178700572909	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATGTATGTATGTATT	NA	False	NA	NA	False	NA	NA	NA	19567261	19556017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_-_19556190_19557229_19557290_19558039_19558141_19566981
transcript_149962.nnic	chrY	-	546	3	NIC	ENSG00000215580.12	novel	352	4	NA	NA	-169	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGAGTCTAATTTTTATA	NA	False	NA	2	True	AATAAA	-23	NA	19567261	19555389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chrY_-_19555555_19558039_19558141_19566981
transcript_149973.nnic	chrY	+	1037	6	NNC	ENSG00000131002.13	novel	1000	5	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	34.1092362857922	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561087	True	NA	NA	False	AATAAA	-16	NA	19567322	19590419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_19567483_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_149981.nnic	chrY	+	1125	6	NNC	ENSG00000131002.13	novel	2098	4	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_3	29.2615789047686	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561087	True	NA	NA	False	AATAAA	-16	NA	19567322	19590419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chrY_+_19567571_19587209_19587508_19588369_19588412_19588542_19588651_19589520_19589613_19590082
transcript_149993.known	chrY	+	1000	5	FSM	ENSG00000131002.13	ENST00000407724.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.1520547419432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561077	True	NA	-18	True	NA	NA	NA	19567312	19590247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567483_19587209_19587508_19588369_19588651_19589526_19589613_19590082
transcript_15.known	ERCC-00035	+	1114	1	FSM	ERCC-00035A	DQ459413	1114	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00035_+_0_1100
transcript_15001.known	chr1	-	864	6	FSM	ENSG00000162910.19	ENST00000430433.5	864	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	278.022732883482	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTCTGTCTCCCCA	-228105245	True	NA	0	True	NA	NA	NA	228109312	228106679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108085_228108234_228108319_228108954_228109022_228109148
transcript_150028.known	chrY	+	832	4	FSM	ENSG00000131002.13	ENST00000447520.5	832	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	6.94422221866655	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTCTCTCATGTGGTCCA	19561146	True	NA	NA	False	AATAAA	-20	NA	19567381	19590423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567483_19587209_19587508_19589520_19589613_19590082
transcript_150034.known	chrY	+	2098	4	FSM	ENSG00000131002.13	ENST00000459719.6	2098	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	13.4742552876052	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTATTCTCTCATGTG	19561114	True	NA	NA	False	AATAAA	-15	NA	19567349	19590418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567571_19587209_19587508_19588369_19589613_19590082
transcript_150036.nic	chrY	+	803	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-49	176	10	0	multi-exon	FALSE	canonical	3	78	junction_1	6.54896090146283	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATAATTAAATAAATGCT	19561087	True	NA	-18	True	NA	NA	NA	19567322	19590247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_150037.nic	chrY	+	975	4	FSM	ENSG00000131002.13	ENST00000686158.1	930	4	-49	4	10	0	multi-exon	FALSE	canonical	3	78	junction_1	6.54896090146283	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTATTCTCTCATGTGG	19561087	True	NA	NA	False	AATAAA	-16	NA	19567322	19590419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19567571_19587209_19587508_19589520_19589613_19590082
transcript_150061.nic	chrY	+	1100	2	ISM	ENSG00000131002.13	ENST00000686905.1	1911	3	-18	1691	-18	-1689	5prime_fragment	FALSE	canonical	3	102	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATGGTAATATATAAAGTA	19561096	True	NA	NA	False	NA	NA	NA	19567331	19588158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chrY_+_19567483_19587209
transcript_150063.known	chrY	+	1074	1	FSM	ENSG00000131002.13	ENST00000593000.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTATTTGTTTTTATT	19593070	False	NA	13	True	AATAAA	-18	NA	19593087	19594161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_19593100_19594200
transcript_150064.known	chrY	-	2666	1	FSM	ENSG00000260197.1	ENST00000566193.1	2666	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCTTTGCATTTATGT	NA	False	NA	NA	False	ATTAAA	-17	NA	19694606	19691940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_-_19691900_19694600
transcript_15007.known	chr1	-	1423	6	FSM	ENSG00000162910.19	ENST00000366731.9	1423	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	284.646166318818	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108138_228108234_228108319_228108436_228109022_228109148
transcript_150071.known	chrY	+	1339	7	FSM	ENSG00000198692.10	ENST00000361365.7	1339	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_3	31.8821615048638	5352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTCTCAGACTGTCTCT	20572890	True	NA	3	True	AATAAA	-14	NA	20575775	20593154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20584473_20584525_20588023_20588106_20589483_20589576_20592340
transcript_150080.known	chrY	+	746	6	FSM	ENSG00000198692.10	ENST00000382772.3	746	6	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_3	180.274901192595	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACGTCAAGTAATTGGATA	20572908	True	NA	14	True	AATAAA	-26	NA	20575793	20592630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chrY_+_20575888_20579607_20579692_20582589_20582694_20588023_20588106_20589483_20589576_20592340
transcript_15017.nic	chr1	-	837	6	NIC	ENSG00000162910.19	novel	665	6	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_4	270.480609286507	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	NA	False	NA	-7	True	NA	NA	NA	228109362	228106686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228108954_228109022_228109148
transcript_15018.known	chr1	-	665	6	FSM	ENSG00000162910.19	ENST00000391867.8	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	308.30180018936	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGAGTCTGTGTCTGT	-228105232	True	NA	-7	True	NA	NA	NA	228109299	228106686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436_228108475_228108954_228109022_228109260
transcript_15045.known	chr1	-	722	5	FSM	ENSG00000162910.19	ENST00000336300.9	722	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	317.917442113515	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105239	True	NA	1	True	NA	NA	NA	228109306	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109148
transcript_15046.known	chr1	-	603	5	FSM	ENSG00000162910.19	ENST00000366747.7	603	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	321.706679290313	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108475_228109260
transcript_15047.known	chr1	-	726	5	FSM	ENSG00000162910.19	ENST00000366744.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	349.664839524937	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105213	True	NA	1	True	NA	NA	NA	228109280	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108440_228108509_228109148
transcript_15054.known	chr1	-	738	5	FSM	ENSG00000162910.19	ENST00000336520.8	738	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	211.354412066557	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGTCTGTGTCTGTCT	-228105232	True	NA	-5	True	NA	NA	NA	228109299	228106684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109148
transcript_15055.known	chr1	-	632	5	FSM	ENSG00000162910.19	ENST00000295008.8	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	257.405322400295	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108954_228109022_228109260
transcript_15063.known	chr1	-	661	4	FSM	ENSG00000162910.19	ENST00000348259.9	661	4	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	286.329646852481	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105216	True	NA	1	True	NA	NA	NA	228109283	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109148
transcript_15074.known	chr1	-	565	4	FSM	ENSG00000162910.19	ENST00000366746.7	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	314.774345982783	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228105232	True	NA	1	True	NA	NA	NA	228109299	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228109260
transcript_15075.known	chr1	-	660	5	FSM	ENSG00000162910.19	ENST00000366736.5	660	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	321.706679290313	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228109006	False	NA	1	True	NA	NA	NA	228109016	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108319_228108436_228108509_228108954
transcript_15076.known	chr1	-	990	4	FSM	ENSG00000162910.19	ENST00000366734.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	326.7438684284	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108887	False	NA	1	True	NA	NA	NA	228108897	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108436
transcript_15077.known	chr1	-	630	4	FSM	ENSG00000162910.19	ENST00000366742.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	307.419727553208	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228109045	False	NA	1	True	NA	NA	NA	228109055	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234_228108322_228108954
transcript_15078.known	chr1	-	1212	3	FSM	ENSG00000162910.19	ENST00000366735.5	1212	3	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_2	84.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108994	False	NA	1	True	NA	NA	NA	228109004	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228108234
transcript_15079.known	chr1	-	694	4	FSM	ENSG00000162910.19	ENST00000459783.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	357.482245091355	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGTCTGTCTCCCCAC	-228108315	False	NA	1	True	NA	NA	NA	228108325	228106678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228106919_228107667_228107870_228107976_228108138_228108234
transcript_15080.known	chr1	-	241	2	FSM	ENSG00000162910.19	ENST00000492170.1	241	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTAGGTCCCTGGGGA	-228105229	True	NA	NA	False	NA	NA	NA	228109296	228108225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228108319_228109148
transcript_15081.known	chr1	-	169	2	FSM	ENSG00000162910.19	ENST00000476267.1	169	2	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATGGACTTTTAGGTCCC	-228109026	False	NA	NA	False	GGGGCT	-40	NA	228109036	228108231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228108319_228108954
transcript_15087.known	chr1	+	1065	9	FSM	ENSG00000143774.17	ENST00000492871.5	1065	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	535.069840651667	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAATGAGTGGAATG	228125277	True	NA	NA	False	AATAAA	-20	NA	228140289	228148946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228141123_228141289_228145510_228145625_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_15093.known	chr1	+	937	8	FSM	ENSG00000143774.17	ENST00000366730.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	477.416174926691	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGGGTGACCCCCGAC	228139949	False	NA	NA	False	NA	NA	NA	228139961	228148840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140160_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_1510.known	chr1	+	624	7	FSM	ENSG00000116288.13	ENST00000493373.5	624	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1796.30869191981	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAGCGAACTGCGACGA	NA	False	NA	NA	False	NA	NA	NA	7954290	7985052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7954324_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_15100.known	chr1	+	656	8	FSM	ENSG00000143774.17	ENST00000453943.5	656	8	0	0	0	0	multi-exon	FALSE	canonical	3	809	junction_1	198.594654345715	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGGCTTGCTGTCTGT	228125285	True	NA	NA	False	AAGAAA	-16	NA	228140297	228148691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_15101.known	chr1	+	689	8	FSM	ENSG00000143774.17	ENST00000366721.5	689	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	575.445843122832	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCCACCCCCTTGGCAGG	228125319	True	NA	NA	False	NA	NA	NA	228140331	228148752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228145510_228145650_228146025_228146068_228146860_228146939_228147405_228147545_228147614_228147700_228148370_228148457_228148664
transcript_15104.known	chr1	+	842	7	FSM	ENSG00000143774.17	ENST00000366728.6	842	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	503.510813080403	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGAATGTGGCCCCAA	228125277	True	NA	NA	False	AATAAA	-29	NA	228140289	228148955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228140364_228145510_228145625_228146025_228146068_228146841_228146939_228147405_228147545_228147614_228147700_228148664
transcript_15108.known	chr1	+	7828	3	FSM	ENSG00000181873.13	ENST00000366711.4	7828	3	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_2	1	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTACGGGCTCTATGGTG	228164941	True	NA	7	True	AATAAA	-18	NA	228165803	228182257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228166158_228174691_228175030_228175121
transcript_15109.known	chr1	+	853	3	FSM	ENSG00000181873.13	ENST00000546123.2	853	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGGTCTTCCCGTCCCAT	228174384	False	NA	NA	False	NA	NA	NA	228174549	228175575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228174611_228174691_228175030_228175121
transcript_15110.known	chr1	-	634	4	FSM	ENSG00000162913.10	ENST00000472613.3	634	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTGCGTATAAGTGGACT	-228213468	True	NA	NA	False	NA	NA	NA	228213646	228203974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228204156_228204329_228204434_228205323_228205448_228213421
transcript_15112.nnic	chr1	+	747	2	NNC	ENSG00000231563.2	novel	387	3	NA	NA	-206	2387	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCAGTGGTCAAGGCATC	NA	False	NA	NA	False	ATTAAA	-22	NA	228407158	228413257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_228407479_228412830
transcript_15113.known	chr1	-	895	1	FSM	ENSG00000181218.6	ENST00000366695.3	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	996	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTTTGCACTTTAATTCT	-228443675	True	NA	-14	True	ATTAAA	-19	NA	228457873	228456978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228457000_228457900
transcript_15115.known	chr1	+	3118	4	FSM	ENSG00000168159.15	ENST00000305943.9	3118	4	0	0	0	0	multi-exon	FALSE	canonical	2	650	junction_2	122.11833969101	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAGTGAGATCATGTGAT	228476290	True	NA	4	True	TATAAA	-20	NA	228487381	228496188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_228487879_228488959_228489053_228493052_228493275_228493882
transcript_15116.known	chr1	-	119	1	FSM	ENSG00000199334.1	ENST00000362464.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	228632749	228632630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228632600_228632700
transcript_15117.known	chr1	-	119	1	FSM	ENSG00000199270.1	ENST00000362400.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	228634989	228634870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228634900_228635000
transcript_15118.known	chr1	-	119	1	FSM	ENSG00000202526.1	ENST00000365656.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	228637214	228637095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228637100_228637200
transcript_15119.known	chr1	-	119	1	FSM	ENSG00000201925.1	ENST00000365055.1	119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTGGCTTTTTGCTG	NA	False	NA	NA	False	NA	NA	NA	228641686	228641567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_228641600_228641700
transcript_15121.known	chr1	-	599	2	FSM	ENSG00000236975.2	ENST00000433734.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTTTCTGGGTAACCCA	-229094895	True	NA	NA	False	AATAAA	-20	NA	229094905	229092814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229093289_229094780
transcript_15125.known	chr1	+	2987	8	FSM	ENSG00000168118.12	ENST00000366690.5	2987	8	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_5	45.6530840319978	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTGTAATTTGTACTGT	229267413	True	NA	NA	False	TTTAAA	-30	NA	229271110	229305894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229286485_229286567_229288728_229288844_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_15130.known	chr1	+	708	6	FSM	ENSG00000168118.12	ENST00000473894.1	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	196.438692726255	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAGATCTTTATGGGGAA	229267496	False	NA	-84	True	NA	NA	NA	229271193	229303894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229295847_229295911_229297481_229297637_229298976_229299073_229302861_229302990_229303805
transcript_15131.known	chr1	+	2799	6	FSM	ENSG00000168118.12	ENST00000618010.4	2799	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	239.286940721804	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGATTTGTAATTTGTAC	229267364	True	NA	NA	False	TTTAAA	-27	NA	229271061	229305891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229295847_229295911_229297519_229297637_229298976_229299073_229302861_229302990_229303805
transcript_15134.known	chr1	+	531	3	FSM	ENSG00000168118.12	ENST00000481981.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	9.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAAATAATTGATGAT	229267377	True	NA	NA	False	AATAAA	-16	NA	229271074	229288882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229271371_229286485_229286567_229288728
transcript_15136.known	chr1	-	5952	2	FSM	ENSG00000177788.7	ENST00000660017.1	5952	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTTAAAACAGCCAGTGT	NA	False	NA	-15	True	AATAAA	-10	NA	229271242	229263942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229269628_229270975
transcript_15137.known	chr1	-	868	2	FSM	ENSG00000177788.7	ENST00000429227.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCATTAACAGAATGGAATT	-229270714	True	NA	NA	False	AATAAA	-15	NA	229271003	229258280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229259121_229270975
transcript_15138.known	chr1	-	1491	7	FSM	ENSG00000143632.15	ENST00000366684.7	1491	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	4.05859855396197	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTCGTGTTTATTTGCTT	-229433966	True	NA	0	True	ATTAAA	-24	NA	229434094	229431244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229431643_229431720_229431903_229431993_229432186_229432269_229432432_229432555_229432881_229432986_229433128_229434003
transcript_15140.known	chr1	-	5208	26	FSM	ENSG00000069248.12	ENST00000261396.6	5208	26	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_19	40.4009108808205	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGAATAATTTTTTCT	-229502774	True	NA	-1	True	AGTAAA	-19	NA	229508341	229440258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229442041_229444913_229445003_229449125_229449191_229450524_229450606_229452524_229452644_229458160_229458297_229460610_229460770_229463542_229463677_229464623_229464876_229465419_229465520_229466633_229466757_229470579_229470805_229475637_229475733_229477596_229477761_229484053_229484146_229486370_229486529_229487465_229487614_229489954_229490103_229495494_229495566_229495891_229496048_229498135_229498307_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_15143.known	chr1	-	779	6	FSM	ENSG00000069248.12	ENST00000366678.4	779	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	122.243363828062	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACTTTGAATGGCTGAAGC	-229502759	True	NA	NA	False	AAGAAA	-42	NA	229508326	229499166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229499221_229499683_229499819_229500755_229500864_229501998_229502103_229506039_229506159_229508067
transcript_15145.nnic	chr1	+	543	2	NIC	ENSG00000223635.2	novel	723	3	NA	NA	63	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTTTTTGTTATAAGGG	229508421	False	NA	NA	False	AATAAA	-24	NA	229508431	229514272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_229508680_229513977
transcript_15146.known	chr1	-	4062	4	FSM	ENSG00000135801.10	ENST00000366675.3	4062	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	8.5764535535124	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCCTGTAGCTTCTGTTG	-229624030	True	NA	-4	True	AATAAA	-16	NA	229625970	229599193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_229602920_229610105_229610211_229614340_229614486_229625884
transcript_15147.known	chr1	+	5601	10	FSM	ENSG00000135763.10	ENST00000258243.7	5601	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	21.2602916254693	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTCCTGTGTAATAT	229623614	True	NA	35	True	CATAAA	-19	NA	229626246	229660200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_229626357_229627620_229627760_229632268_229632446_229634916_229638248_229643532_229643694_229645858_229645970_229647509_229647753_229651234_229651323_229654248_229654389_229659099
transcript_15148.known	chr1	+	4423	16	FSM	ENSG00000143641.10	ENST00000366672.5	4423	16	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_8	29.2980090336073	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTCTTTGCTGGCCAG	230063895	True	NA	30	True	AATAAA	-19	NA	230067237	230282122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230067407_230178217_230178312_230203136_230203291_230236013_230236113_230236352_230236421_230236659_230236726_230243305_230243428_230246062_230246151_230249183_230249272_230250456_230250561_230255217_230255345_230262572_230262666_230262921_230263006_230265240_230265368_230274444_230274565_230279302
transcript_1515.known	chr1	+	1127	7	FSM	ENSG00000116288.13	ENST00000338639.10	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	1587	junction_1	1206.66054326255	5999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	7904190	True	NA	NA	False	ATTAAA	-15	NA	7961710	7985505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_15150.known	chr1	+	593	2	FSM	ENSG00000143641.10	ENST00000488903.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATGTAGTTTCTGCGTT	230063916	True	NA	NA	False	ATTAAA	-18	NA	230067258	230092033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230067407_230091588
transcript_15151.known	chr1	+	2843	18	FSM	ENSG00000135775.14	ENST00000366668.7	2843	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_14	39.1794734761522	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGCTCGTTTTCT	230639865	True	NA	8	True	AATAAA	-15	NA	230642566	230693982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230642679_230659463_230659626_230660757_230660824_230663140_230663222_230664483_230664588_230668675_230668785_230669355_230669536_230671515_230671641_230674997_230675125_230678912_230679053_230683573_230683636_230685084_230685237_230686934_230687133_230688070_230688144_230688422_230688563_230690013_230690154_230691383_230691565_230693291
transcript_15156.known	chr1	-	3276	23	FSM	ENSG00000143643.13	ENST00000366661.9	3276	23	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	6.80847794303737	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTATGTGTTTATTTTG	-230978180	True	NA	-1	True	AATAAA	-41	NA	230978861	230906242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_230907020_230908711_230908792_230908941_230909021_230911469_230911550_230912622_230912759_230916192_230916303_230920509_230920595_230921420_230921505_230923840_230923934_230924840_230924974_230925516_230925648_230928936_230929094_230931297_230931473_230931735_230931878_230933778_230933862_230939385_230939497_230940439_230940557_230943805_230943899_230945388_230945455_230954332_230954404_230958223_230958300_230961208_230961304_230978559
transcript_15162.known	chr1	+	991	6	FSM	ENSG00000173409.14	ENST00000450711.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	67.5810624361588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATCTTTTGTTTCTACTT	230976800	True	NA	NA	False	NA	NA	NA	230979115	230999803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_230999622
transcript_15163.known	chr1	+	1428	6	FSM	ENSG00000173409.14	ENST00000310256.7	1428	6	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_3	12.0896650077659	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCTCCCCTTTCCACTC	230976778	True	NA	NA	False	AATAAA	-18	NA	230979093	231000733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979280_230988319_230988440_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_15169.known	chr1	+	1170	5	FSM	ENSG00000173409.14	ENST00000366658.6	1170	5	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	70.414842185437	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTGTAAATTTTCAATT	230976778	True	NA	20	True	AATAAA	-20	NA	230979093	231000595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_230979280_230990109_230990264_230995759_230995985_230997120_230997268_231000137
transcript_15177.known	chr1	-	1432	7	FSM	ENSG00000143633.13	ENST00000366651.7	1432	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	28.4648906549806	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGACTGTTAAGT	-231239816	True	NA	-3	True	AATAAA	-17	NA	231241178	231223762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229207_231238856_231239189_231241023
transcript_15178.known	chr1	-	1430	7	FSM	ENSG00000143633.13	ENST00000366649.7	1430	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	31.0559530882925	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCCTGTGACTGTTAA	-231239813	True	NA	-5	True	AATAAA	-15	NA	231241175	231223764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231224415_231225470_231225524_231226738_231226826_231226972_231227069_231229149_231229210_231238856_231239189_231241023
transcript_15186.known	chr1	+	2641	16	FSM	ENSG00000116906.13	ENST00000366647.9	2641	16	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_8	40.1760569936319	700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATTTGAAAGAGATATTT	231235898	True	NA	88	True	ATTAAA	-18	NA	231241211	231277973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231241457_231250960_231251144_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_15187.known	chr1	+	839	6	FSM	ENSG00000116906.13	ENST00000436239.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	156.336048306205	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGATAAGATCTTGGAAGAA	231235893	True	NA	NA	False	TTTAAA	-44	NA	231241206	231266091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231241457_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013
transcript_15188.known	chr1	+	2685	17	FSM	ENSG00000116906.13	ENST00000644483.1	2685	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.673425083888	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTAGCTTGCTTTAATT	231235902	True	NA	48	True	ATTAAA	-28	NA	231241215	231277933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231241457_231250960_231251144_231258221_231258310_231260506_231260684_231262722_231262853_231265292_231265421_231265711_231265788_231266013_231266166_231266276_231266408_231267679_231267904_231270757_231271001_231272311_231272392_231273921_231274063_231275220_231275321_231275404_231275499_231276134_231276197_231277498
transcript_15189.known	chr1	+	3223	5	FSM	ENSG00000010072.16	ENST00000295050.12	3223	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	7.17635004720366	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATGTATATTATGTTC	231337393	True	NA	NA	False	AATAAA	-17	NA	231338292	231355023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303_231351572_231352609
transcript_15194.known	chr1	+	3559	4	FSM	ENSG00000010072.16	ENST00000391858.8	3559	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	5.71547606649408	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTTTTGACAATTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	231337103	231353132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768_231339869_231347796_231347926_231351303
transcript_15197.known	chr1	+	603	2	FSM	ENSG00000010072.16	ENST00000492437.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAAAAAGGCTTCTAGGG	231337395	True	NA	NA	False	AGTAAA	-12	NA	231338294	231340061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768
transcript_15199.known	chr1	+	1667	3	FSM	ENSG00000010072.16	ENST00000008440.9	1667	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAACTGTACATTAGTTT	231337356	True	NA	NA	False	AATAAA	-20	NA	231338255	231352521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231338605_231339768_231339869_231351303
transcript_1520.known	chr1	+	977	7	FSM	ENSG00000116288.13	ENST00000377491.5	977	7	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_1	1781.06023355628	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGCAGAATAAACAGGGCA	7904373	False	NA	-2	True	NA	NA	NA	7961893	7985250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7962082_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_15201.known	chr1	+	3048	11	FSM	ENSG00000270106.6	ENST00000602885.5	3048	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.9338027137617	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAGTATGCTTATTTAAG	231524638	True	NA	NA	False	AATAAA	-13	NA	231528652	231819244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231528827_231529254_231529360_231561127_231561256_231693825_231694806_231701954_231702025_231749925_231750077_231767139_231767270_231770834_231771071_231795241_231795297_231800107_231800211_231818328
transcript_15204.known	chr1	-	419	4	FSM	ENSG00000233461.6	ENST00000454631.2	419	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	34.9698282650757	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCATCCAGTCAACCCAAA	-231527623	True	NA	-68	True	NA	NA	NA	231528517	231522516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231524425_231524548_231527337_231527416_231528419
transcript_15205.known	chr1	-	2172	3	FSM	ENSG00000233461.6	ENST00000654602.1	2172	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	9.5	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGAATCTTTTCTTTTT	-231527710	True	NA	NA	False	TATAAA	-28	NA	231528604	231520728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231527337_231527416_231528419
transcript_15206.known	chr1	-	1721	3	FSM	ENSG00000233461.6	ENST00000662999.1	1721	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	38.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTCAGGCGCGGTGGTT	-231527724	True	NA	NA	False	NA	NA	NA	231528618	231521276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522721_231527337_231527416_231528419
transcript_15207.known	chr1	-	444	3	FSM	ENSG00000233461.6	ENST00000668147.1	444	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTCAGTTTGGGAATAG	-231527564	False	NA	-15	True	AATAAA	-14	NA	231528458	231522463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522791_231527337_231527416_231528419
transcript_15208.known	chr1	-	300	3	FSM	ENSG00000233461.6	ENST00000661659.1	300	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	38.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTAGTCTATGGTATT	-231527606	True	NA	NA	False	AATAAA	-15	NA	231528500	231523063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231523205_231527337_231527416_231528419
transcript_15209.known	chr1	-	280	2	FSM	ENSG00000233461.6	ENST00000416221.6	280	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGGAATAGCTTGTTAT	-231527623	True	NA	-7	True	AATAAA	-22	NA	231528517	231522455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231528419
transcript_15210.known	chr1	-	1428	2	FSM	ENSG00000233461.6	ENST00000666601.1	1428	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGACTCTGAATGAAGC	-231527702	True	NA	NA	False	NA	NA	NA	231528596	231526164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231527416_231528419
transcript_15211.known	chr1	-	416	4	FSM	ENSG00000233461.6	ENST00000440665.5	416	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.2842712474619	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGTTTGGGAATAGCTT	-231527361	False	NA	-12	True	AATAAA	-17	NA	231528255	231522460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_231522638_231527337_231527416_231527765_231527793_231528121
transcript_15212.known	chr1	+	2634	6	FSM	ENSG00000116918.15	ENST00000366639.9	2634	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	26.026140705068	299	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTTTTTTTGTTTGTTC	231524654	True	NA	NA	False	AATAAA	-21	NA	231528668	231566524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_231528827_231529254_231529360_231537212_231537328_231542480_231542612_231561127_231561256_231564527
transcript_15239.nnic	chr1	+	978	4	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41666	11646	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_3	27.1456974286698	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTGATGTTTCCACA	NA	False	NA	23	True	AATAAA	-17	NA	232118424	232197289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_232118714_232152075_232152169_232160170_232160224_232196746
transcript_15241.nnic	chr1	+	592	4	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41630	-25386	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	16.3367343397905	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	232118174	True	NA	28	True	AATAAA	-21	NA	232118460	232160257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_232118714_232120570_232120730_232152075_232152169_232160170
transcript_15244.nnic	chr1	+	469	3	NNC	ENSG00000235152.1	novel	818	3	NA	NA	-41666	-25386	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_1	13	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	NA	False	NA	28	True	AATAAA	-21	NA	232118424	232160257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_232118714_232152075_232152169_232160170
transcript_15246.known	chr1	-	7105	24	FSM	ENSG00000116991.12	ENST00000674749.1	7105	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_22	22.0157187358391	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGTCAGGTGACTAG	-232628465	True	NA	NA	False	AATAAA	-27	NA	232630122	232397964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_232399274_232402391_232402474_232403447_232403572_232415493_232415626_232425588_232425809_232428410_232428565_232432246_232432472_232439107_232439497_232441290_232441395_232441767_232441869_232443601_232443686_232445528_232445787_232460886_232461162_232464839_232465417_232471370_232471529_232479626_232479731_232483791_232483967_232490873_232491063_232493526_232493661_232513856_232515609_232533489_232533584_232574173_232574223_232608826_232608989_232629868
transcript_15247.known	chr1	+	4514	1	FSM	ENSG00000212916.6	ENST00000418460.4	4514	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATCAAAGAAATAATTCCT	232804934	True	NA	11	True	AATAAA	-20	NA	232805415	232809929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232805400_232809900
transcript_15251.nic	chr1	-	1076	8	NIC	ENSG00000135749.19	novel	3392	20	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.5857123814601	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGATTACATTTTAATG	-233181086	True	NA	NA	False	AATAAA	-15	NA	233181130	233095656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282_233160434_233161270_233161364_233177801_233177899_233179065_233179176_233181032
transcript_15252.known	chr1	-	803	4	FSM	ENSG00000135749.19	ENST00000484347.5	803	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.7156650905785	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGATAGGTTTAATGCA	-233160288	True	NA	-5	True	AATAAA	-18	NA	233160307	233095405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_233095864_233135012_233135191_233139713_233139856_233160282
transcript_15263.known	chr1	+	6324	5	FSM	ENSG00000135778.12	ENST00000366628.10	6324	5	0	0	0	0	multi-exon	FALSE	canonical	3	1435	junction_3	45.5686295602578	4784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCAGTTGTCTTATTTTC	232944432	True	NA	8	True	TATAAA	-16	NA	232950610	232983882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232978162
transcript_15280.known	chr1	+	980	4	FSM	ENSG00000135778.12	ENST00000490807.5	980	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	690.689188821973	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCTTACTGCTTAATAAAT	232944435	True	NA	-23	True	AAGAAA	-31	NA	232950613	232978751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232978162
transcript_15286.known	chr1	+	767	4	FSM	ENSG00000135778.12	ENST00000494689.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	626.91360382964	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGCACATGATTTGGGT	232944426	True	NA	-34	True	NA	NA	NA	232950604	232978482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232956346_232956444_232969908_232970119_232978162
transcript_15299.known	chr1	+	882	3	FSM	ENSG00000135778.12	ENST00000496662.5	882	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	737	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTAGGTCATCTCCCC	232944454	True	NA	-1	True	AAGAAA	-2	NA	232950632	232978722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232969908_232970119_232978162
transcript_15302.known	chr1	+	761	4	FSM	ENSG00000135778.12	ENST00000479125.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	699.932536431587	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTACAGCCAGTCCTCC	232944663	False	NA	NA	False	AAGAAA	-33	NA	232950841	232970118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232951133_232955556_232955720_232956346_232956444_232969908
transcript_15303.known	chr1	+	1762	5	FSM	ENSG00000135778.12	ENST00000366627.4	1762	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	653.670597472458	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGTGAACTCTTTGTT	232944461	True	NA	5	True	AATAAA	-17	NA	232950639	232977528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_232950745_232955556_232955720_232956346_232956444_232969908_232970119_232976341
transcript_15304.known	chr1	-	580	1	FSM	ENSG00000231940.1	ENST00000443360.1	580	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	398	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTAAACAAAAATGACTAAA	-233289411	False	NA	NA	False	NA	NA	NA	233289447	233288867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_233288900_233289400
transcript_15305.known	chr1	+	2061	3	FSM	ENSG00000135750.15	ENST00000366621.8	2061	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	13	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATGCTTTCATATATCA	233613143	True	NA	17	True	AATAAA	-23	NA	233614105	233672514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_233614527_233666594_233666991_233671270
transcript_15307.known	chr1	-	1723	2	FSM	ENSG00000233332.1	ENST00000412483.1	1723	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATTGTTGTTATCTCGTT	-234215049	True	NA	NA	False	CATAAA	-32	NA	234215088	234212605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234214108_234214867
transcript_15308.known	chr1	-	438	1	FSM	ENSG00000235605.1	ENST00000422958.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	314	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	-234356640	False	NA	NA	False	NA	NA	NA	234357141	234356703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234356700_234357100
transcript_1531.known	chr1	+	949	5	FSM	ENSG00000116288.13	ENST00000465354.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	1587	junction_1	1359.42064865883	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACCATTTTAAGATCCAT	7904227	True	NA	NA	False	NA	NA	NA	7961747	7971521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961794_7962762_7962876_7965323_7965426_7969344_7969405_7970893
transcript_15314.known	chr1	+	641	3	FSM	ENSG00000168275.16	ENST00000366613.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	313.5	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACTTTTGTTTTGTTTTT	234373668	False	NA	12	True	AGTAAA	-17	NA	234373682	234384045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_234373841_234374229_234374390_234383722
transcript_15317.known	chr1	-	575	2	FSM	ENSG00000231663.2	ENST00000451795.2	644	2	69	0	69	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATCTCTCAGCAGAGTC	NA	False	NA	NA	False	AATAAA	-20	NA	234373593	234372806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234373211_234373422
transcript_15318.known	chr1	+	697	3	FSM	ENSG00000168275.16	ENST00000619305.1	697	3	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_2	4.5	8325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTGTTTTGTTTTTGTT	234365152	True	NA	15	True	AGTAAA	-20	NA	234373467	234384048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_234373679_234374229_234374390_234383722
transcript_15319.known	chr1	+	1013	2	FSM	ENSG00000168275.16	ENST00000366612.1	1013	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTGTTTTTG	234373686	False	NA	13	True	AGTAAA	-18	NA	234373700	234384046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_234374390_234383722
transcript_15320.known	chr1	-	1650	8	FSM	ENSG00000059588.10	ENST00000462259.5	1650	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	54.2631532065578	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTCCTTTAATAAAATAT	NA	False	NA	1	True	AATAAA	-20	NA	234406380	234391377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_234391746_234392415_234392553_234393361_234393487_234393645_234393838_234398381_234398554_234400852_234400949_234401180_234401263_234405902
transcript_15329.known	chr1	-	3283	5	FSM	ENSG00000173726.11	ENST00000366607.5	3283	5	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_1	69.5678625516122	5491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCTTGGCGTATGTTT	-235113295	True	NA	-22	True	ATTAAA	-15	NA	235128837	235109340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235112109_235113767_235113911_235119817_235119900_235122325_235122373_235128594
transcript_15333.known	chr1	-	5811	23	FSM	ENSG00000054267.22	ENST00000349213.7	5811	23	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	30.2116500981474	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTTTCTAAAAGATTT	-235324143	True	NA	1	True	AATAAA	-25	NA	235328219	235166894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235168653_235172617_235172765_235175183_235175400_235177799_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235219792_235219969_235220301_235220546_235221564_235221663_235223165_235223261_235224702_235224776_235229230_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_15336.known	chr1	-	2315	11	FSM	ENSG00000054267.22	ENST00000466653.1	2315	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	11.7575507653593	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-235324141	True	NA	NA	False	NA	NA	NA	235328217	235228310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235229386_235231112_235231190_235234412_235234493_235240312_235240452_235246419_235246512_235252729_235252810_235255659_235255751_235257159_235257226_235260641_235260753_235326913_235326969_235327768
transcript_15338.known	chr1	-	1660	5	FSM	ENSG00000054267.22	ENST00000444620.2	1660	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	59.7285526360718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTAATTTTTAAAATATAA	-235213905	False	NA	65	True	AAAAAG	-27	NA	235213916	235177786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235177914_235181584_235182794_235194012_235194212_235196030_235196116_235213876
transcript_15339.known	chr1	-	1847	11	FSM	ENSG00000188739.15	ENST00000408888.8	1847	11	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_8	40.6674316867933	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGTGTGCTCAAGTTC	-235149486	True	NA	0	True	ATTAAA	-19	NA	235161250	235131182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235152705_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_15340.known	chr1	-	1273	10	FSM	ENSG00000188739.15	ENST00000447801.5	1273	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	225.478147636813	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGCTATTATCTGCTGATA	-235149456	True	NA	32	True	AATAAA	-1	NA	235161220	235131666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235131998_235135651_235135771_235136033_235136074_235137876_235137941_235138090_235138175_235148403_235148448_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_15341.known	chr1	-	881	5	FSM	ENSG00000188739.15	ENST00000476261.5	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	32.5067300724019	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAAAGCCTGCAATGTACT	-235149468	True	NA	NA	False	AATAAA	-15	NA	235161232	235152487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235152766_235154880_235155113_235160510_235160648_235160892_235161068_235161173
transcript_15344.nnic	chr1	+	1941	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	4	126	1	0	multi-exon	FALSE	canonical	3	13	junction_1	46.3369115824523	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	235363348	True	NA	2	True	AATAAA	-2	NA	235367416	235448952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15349.nic	chr1	+	1694	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-7	3687	0	10	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTGACAACCAACTAATAA	235363351	True	NA	-31	True	NA	NA	NA	235367419	235448756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15350.nic	chr1	+	1890	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	-7	3491	0	0	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAACCTACTAATGAT	235363351	True	NA	2	True	AATAAA	-2	NA	235367419	235448952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15361.known	chr1	+	1407	3	FSM	ENSG00000152904.11	ENST00000391855.2	1407	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	192	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGCCAGTTTCTATTAGC	235323306	True	NA	58	True	NA	NA	NA	235328570	235343138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235328779_235341707_235341779_235342010
transcript_15362.known	chr1	+	2895	4	FSM	ENSG00000152904.11	ENST00000282841.9	2895	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	56.7802782663136	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTTAAGTAGATTTGTTC	235323305	True	NA	8	True	ATTAAA	-24	NA	235328569	235344532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235328779_235335241_235335335_235341707_235341779_235342010
transcript_15363.known	chr1	+	2102	18	FSM	ENSG00000284770.2	ENST00000646536.1	2102	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	70.9807225645002	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363361	True	NA	-6	True	NA	NA	NA	235367429	235448944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235432945_235433172_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438927_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15364.known	chr1	+	2071	17	FSM	ENSG00000284770.2	ENST00000406207.5	2071	17	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	46.3369115824523	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTAATATCTGTCATAAG	235363344	True	NA	NA	False	AATAAA	-10	NA	235367412	235449078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367553_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15368.known	chr1	+	1908	17	FSM	ENSG00000284770.2	ENST00000646186.1	1908	17	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	48.4264906843352	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTATACATAATAGCAA	235363361	True	NA	-26	True	NA	NA	NA	235367429	235448924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419416_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1537.known	chr1	+	1088	7	FSM	ENSG00000116288.13	ENST00000493678.5	1088	7	0	0	0	0	multi-exon	FALSE	canonical	3	3700	junction_1	429.298426375976	12363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTGTGGTGGCTCATG	7904171	True	NA	NA	False	ATTAAA	-15	NA	7961691	7985505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7969344_7969405_7970893_7970964_7977651_7977739_7984893
transcript_15370.known	chr1	+	5374	17	FSM	ENSG00000284770.2	ENST00000642610.2	5374	17	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	20.2614743725623	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAGAAGATCCTCATTCT	235363358	True	NA	NA	False	ATTAAA	-19	NA	235367426	235452443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15371.known	chr1	+	1897	17	FSM	ENSG00000284770.2	ENST00000646286.1	1897	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.6654551808769	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATAGCAATAATAAAG	235363361	True	NA	-18	True	NA	NA	NA	235367429	235448932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235413875_235413998_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15378.known	chr1	+	1642	16	FSM	ENSG00000284770.2	ENST00000646848.1	1642	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	51.1948782160438	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTATCGTGTCTGGGGT	235363361	True	NA	4	True	AATAAA	-15	NA	235367429	235448791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1538.known	chr1	+	795	6	FSM	ENSG00000116288.13	ENST00000377493.9	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1848.56629851353	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGATTGTTTCTTGTTTTG	7904180	True	NA	29	True	AATAAA	-19	NA	7961700	7985281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_7961736_7962762_7962876_7965323_7965426_7970893_7970964_7977651_7977739_7984893
transcript_15380.known	chr1	+	1779	16	FSM	ENSG00000284770.2	ENST00000643142.1	1779	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	49.5441441769077	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAATAATAAAGGCTTTGAA	235363361	True	NA	-10	True	NA	NA	NA	235367429	235448940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15383.known	chr1	+	1801	16	FSM	ENSG00000284770.2	ENST00000647418.1	1801	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.8643453476129	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTTGAACCTACTAATGA	235363354	True	NA	1	True	AATAAA	-1	NA	235367422	235448951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235419472_235419562_235427139_235427240_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15386.known	chr1	+	1683	15	FSM	ENSG00000284770.2	ENST00000366601.8	1683	15	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	50.6653687624667	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363361	True	NA	-6	True	NA	NA	NA	235367429	235448944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_1539.known	chr1	+	2496	9	FSM	ENSG00000162426.16	ENST00000471889.7	2496	9	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	4.51213641194501	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTCTAGGCATTGCT	8317711	True	NA	9	True	AATAAA	-17	NA	8318113	8344165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_8318187_8324305_8324727_8325297_8325391_8325817_8326043_8330208_8330937_8335436_8335591_8337815_8337993_8339492_8339699_8343746
transcript_15395.known	chr1	+	1598	14	FSM	ENSG00000284770.2	ENST00000643524.1	1598	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	67.7773940774429	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAAAGGCTTTGAACCTA	235363361	True	NA	-6	True	NA	NA	NA	235367429	235448944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235414432_235414619_235430704_235430805_235434203_235434281_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15400.nnic	chr1	+	1539	13	NIC	ENSG00000284770.2	novel	1683	15	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	54.2936971991736	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAATGATTTTCTGATCTT	235363347	True	NA	13	True	AATAAA	-13	NA	235367415	235448963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432_235414619_235435744_235435841_235436385_235436451_235436543_235436609_235437321_235437475_235438768_235438923_235441813_235441883_235442851_235442912_235448348_235448441_235448669
transcript_15410.known	chr1	-	428	2	FSM	ENSG00000285177.1	ENST00000646955.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATGGTTTCTGTCAATT	NA	False	NA	NA	False	ATTAAA	-16	NA	235367366	235366352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235366624_235367209
transcript_15412.known	chr1	+	2001	4	FSM	ENSG00000284770.2	ENST00000644625.1	2001	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	19.2930615046504	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTGACAGAATGAGACTC	235363361	True	NA	NA	False	NA	NA	NA	235367429	235416142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_235367505_235380018_235380150_235401502_235401588_235414432
transcript_15413.known	chr1	-	4897	4	FSM	ENSG00000168243.11	ENST00000391854.7	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_3	16.2138486760204	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGAATCCTACTTTTTTG	-235649766	False	2015	-10	True	AATAAA	-24	NA	235649784	235547684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235649661
transcript_15414.known	chr1	-	4978	4	FSM	ENSG00000168243.11	ENST00000450593.5	4978	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	214.751536018307	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCAAGAATCCTACTTTTT	-235650736	False	NA	-12	True	AATAAA	-22	NA	235650754	235547686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235595399_235595512_235650548
transcript_15417.known	chr1	-	1595	3	FSM	ENSG00000168243.11	ENST00000366597.5	1595	3	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_2	13	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTTTTATTTTATTTA	-235595468	True	NA	-15	True	AATAAA	-14	NA	235595479	235550831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_235552238_235583739_235583849_235595399
transcript_15418.nic	chr1	-	617	4	NIC	ENSG00000143669.15	novel	951	4	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAGACCATGTATAGTGA	-235866887	True	NA	NA	False	AATAAA	-22	NA	235866938	235828804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_235829037_235830225_235830425_235833577_235833668_235866842
transcript_15419.nnic	chr1	+	1021	2	Antisense	novelGene_ENSG00000143669.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTGTTGAGATTATTTG	235670078	True	NA	NA	False	AATAAA	-21	NA	235670126	235711139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_235670651_235710642
transcript_15422.nnic	chr1	+	878	2	Antisense	novelGene_ENSG00000143669.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACATCAGAAATTGTAAAGA	235670150	False	NA	NA	False	AATAAA	-22	NA	235670164	235682688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_235670651_235682296
transcript_15425.nnic	chr1	+	1287	2	Antisense	novelGene_ENSG00000143669.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCAAAGGCTAATATTACT	235670034	True	NA	NA	False	AATAAA	-19	NA	235670239	235683172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_235670651_235682296
transcript_15428.nnic	chr1	-	1199	3	NNC	ENSG00000116962.15	novel	5792	20	NA	NA	-98	-70223	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	82	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCGGTTGAATATGTTAACA	-236061693	True	NA	2	True	AATAAA	-19	NA	236065207	236046052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_236046599_236048689_236048990_236064854
transcript_15429.known	chr1	-	4994	16	FSM	ENSG00000086619.15	ENST00000354619.10	4994	16	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_11	8.06804395955633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCTTATTTAATTTTTT	-236281261	True	NA	NA	False	ATTAAA	-45	NA	236281958	236215100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_236218577_236220831_236220966_236221923_236222011_236225069_236225140_236226268_236226516_236226646_236226740_236230223_236230251_236232827_236232840_236235788_236235836_236236277_236236399_236243421_236243496_236249884_236249968_236252049_236252092_236253421_236253506_236269874_236269995_236281681
transcript_1543.known	chr1	-	454	3	FSM	ENSG00000142599.19	ENST00000460659.5	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	37	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCGTCAACACACCCTC	-8422896	False	NA	NA	False	NA	NA	NA	8423419	8365854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8365975_8422726_8422808_8423166
transcript_15433.nnic	chr1	-	673	3	NNC	ENSG00000086619.15	novel	5192	2	NA	NA	9	-3133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTATCTTGTGCAGAAAT	-236281313	True	NA	NA	False	ATTAAA	-20	NA	236282010	236268212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_236268437_236269874_236269995_236281681
transcript_15435.known	chr1	+	3116	6	FSM	ENSG00000186197.15	ENST00000359362.6	3116	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	8.93532316147547	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTTGTTGGTTTATT	236394810	True	NA	22	True	AAAAAG	-45	NA	236395412	236484930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236395661_236409215_236409275_236414259_236414300_236427391_236427451_236468230_236468277_236482266
transcript_15437.nnic	chr1	+	742	4	NNC	ENSG00000186197.15	novel	3116	6	NA	NA	-84	-64486	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	15.8394724940223	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCATCTTCATTTTCT	236395290	False	NA	8	True	AATACA	-15	NA	236395328	236417833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_236395661_236409215_236409275_236414259_236414300_236417522
transcript_15446.known	chr1	+	5957	10	FSM	ENSG00000116977.19	ENST00000366584.9	5957	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	8.18007214191376	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTTGGTCTGTTATA	236523407	True	NA	NA	False	AATAAA	-32	NA	236523981	236552981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236524062_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_15449.known	chr1	+	1852	10	FSM	ENSG00000116977.19	ENST00000526634.5	1852	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.3261511041808	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTATTAGCTGCAAGC	236524006	False	NA	NA	False	AATAAA	-5	NA	236524580	236548796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236524741_236525967_236526116_236537496_236537586_236538878_236539090_236540563_236540684_236541653_236541711_236542760_236542788_236543559_236543649_236544749_236544916_236548011
transcript_1545.known	chr1	-	396	3	FSM	ENSG00000142599.19	ENST00000465125.1	396	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	40	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGATTAAGACTCGCACCG	-8423711	False	NA	NA	False	NA	NA	NA	8424234	8365879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8365975_8422726_8422808_8424014
transcript_15452.known	chr1	-	793	3	FSM	ENSG00000119285.11	ENST00000366579.1	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	38	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTCCCAAGTAGCTGGGA	-236593454	True	NA	NA	False	NA	NA	NA	236604488	236602824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_236603377_236603953_236604128_236604421
transcript_15453.nic	chr1	-	650	2	ISM	ENSG00000119285.11	ENST00000366579.1	793	3	-56	776	-28	-776	5prime_fragment	FALSE	canonical	3	478	junction_1	0	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAAGTGTTCCCTGCC	-236593510	True	NA	NA	False	NA	NA	NA	236604544	236603600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_236604128_236604421
transcript_15454.known	chr1	-	1457	1	FSM	ENSG00000223776.5	ENST00000487567.2	1457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTCTGTTAGGGACC	-236524474	True	NA	-1	True	NA	NA	NA	236524508	236523051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_236523100_236524500
transcript_15455.known	chr1	-	8459	45	FSM	ENSG00000119285.11	ENST00000366582.8	8459	45	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_41	58.7743751087282	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATCTTGCCTCTTCCTGA	-236593482	True	NA	-19	True	CATAAA	-17	NA	236604516	236549004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_236550991_236551998_236552108_236553580_236553740_236554597_236554753_236555295_236555465_236555550_236555656_236555804_236555940_236556099_236556259_236557194_236557346_236558236_236558530_236558994_236559136_236559713_236559838_236561224_236561272_236564497_236564662_236565918_236566046_236566645_236566877_236568995_236569125_236571350_236571473_236571567_236571687_236572410_236572555_236572724_236572829_236574201_236574334_236574660_236574904_236576218_236576378_236576779_236576950_236581221_236581415_236582735_236582873_236583012_236583197_236585024_236585217_236585819_236585942_236586240_236586453_236587401_236587491_236587947_236588044_236590846_236590955_236591992_236592111_236592522_236592634_236594011_236594115_236595539_236595674_236595832_236596045_236596835_236596977_236597877_236597980_236599482_236599625_236603159_236603377_236603953_236604128_236604421
transcript_15456.known	chr1	+	2965	6	FSM	ENSG00000077522.15	ENST00000461367.2	2965	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	5.51361950083609	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTAAACTTAATTTATAAA	NA	False	NA	NA	False	ATTAAA	-18	NA	236753811	236764603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236754082_236755018_236755199_236757485_236757633_236759723_236759790_236761014_236761174_236762460
transcript_15462.known	chr1	+	370	1	FSM	ENSG00000237991.3	ENST00000450819.1	370	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCACGTTGTCAATAAAG	236981250	False	NA	NA	False	NA	NA	NA	236981338	236981708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_236981300_236981700
transcript_15465.known	chr1	-	1061	3	FSM	ENSG00000215808.4	ENST00000649127.1	1061	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	43	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCATTGTTGGTCAAATT	-238485086	True	NA	NA	False	AATAAA	-29	NA	238486044	238476541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238476818_238481156_238481682_238485784
transcript_15466.known	chr1	-	1450	3	FSM	ENSG00000215808.4	ENST00000648188.1	1450	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTATCCTTAATTTTCT	-238485096	True	NA	-33	True	AATAAA	-24	NA	238486054	238480397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238481682_238485784_238485897_238486000
transcript_15467.known	chr1	-	1430	3	FSM	ENSG00000215808.4	ENST00000649385.1	1430	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	46	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAATGCATTATCCTTAA	-238485086	True	NA	-39	True	AATAAA	-18	NA	238486044	238480403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238481682_238485784_238485897_238486004
transcript_15469.known	chr1	-	1536	2	FSM	ENSG00000215808.4	ENST00000648241.1	1536	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	-238485080	True	NA	-8	True	AATAAA	-28	NA	238486038	238480372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238481682_238485811
transcript_15470.known	chr1	-	1585	2	FSM	ENSG00000215808.4	ENST00000657655.1	1585	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTGAAATGTGTATGA	-238485102	True	NA	-8	True	AATAAA	-28	NA	238486060	238480372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_238481682_238485784
transcript_15477.nnic	chr1	+	951	5	NIC	ENSG00000133019.12	novel	8780	5	NA	NA	-40	-59171	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	5.3851648071345	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGAATGGACAAATTGC	NA	False	NA	NA	False	ATTAAA	-16	NA	239629032	239827425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_239629540_239632223_239632287_239678185_239678289_239718795_239718900_239827251
transcript_15478.known	chr1	+	8780	5	FSM	ENSG00000133019.12	ENST00000255380.8	8780	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.58602010819715	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTTGCTTTTATTTA	239628879	True	NA	NA	False	AATAAA	-19	NA	239629072	239915452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_239629540_239632223_239632287_239678185_239678289_239827251_239827379_239907432
transcript_15480.nnic	chr1	+	857	3	NNC	ENSG00000133019.12	novel	8780	5	NA	NA	-40	30020	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	4	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAAAATTTTCCCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	239629032	239636227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_239629540_239632223_239632287_239635940
transcript_15481.nic	chr1	+	570	2	ISM	ENSG00000133019.12	ENST00000255380.8	8780	5	-40	283166	-40	26079	5prime_fragment	FALSE	canonical	3	10	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGATCCTTTTTCTAGTT	NA	False	NA	NA	False	AATAAA	-34	NA	239629032	239632286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_239629540_239632223
transcript_15482.known	chr1	+	473	2	FSM	ENSG00000287516.1	ENST00000413994.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTATATCGATTGAAC	241424372	False	NA	10	True	AATAAA	-24	NA	241424397	241433492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241424550_241433171
transcript_15483.nic	chr1	+	725	2	NIC	ENSG00000287516.1	novel	473	2	NA	NA	19	0	intron_retention	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCTATATCGATTGAAC	241424285	True	NA	10	True	AATAAA	-24	NA	241424310	241433492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_241424715_241433171
transcript_15485.known	chr1	-	1791	10	FSM	ENSG00000091483.8	ENST00000366560.4	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_9	72.9339291735428	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTCCTATGTTAATTGA	-241514336	True	NA	-14	True	AATAAA	-37	NA	241519755	241497602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508786_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_15486.known	chr1	-	1818	10	FSM	ENSG00000091483.8	ENST00000684483.1	1818	10	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_6	189.199352699021	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATAGTTGAATCTAT	-241514366	True	NA	8	True	AATAAA	-41	NA	241519785	241497580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241497971_241500436_241500591_241502442_241502571_241504041_241504246_241506002_241506169_241508602_241508761_241511966_241512144_241513602_241513714_241517181_241517317_241519590
transcript_15487.known	chr1	+	1281	1	FSM	ENSG00000287513.1	ENST00000653014.1	1281	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGCTATATTTTTTCCTAT	241640504	False	NA	NA	False	AATAAA	-28	NA	241640554	241641835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241640600_241641800
transcript_15488.known	chr1	+	3449	16	FSM	ENSG00000174371.17	ENST00000366548.8	3449	16	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	42.5918093325727	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTAGAGGAAATCACTGTG	241844809	True	NA	3	True	AGTAAA	-15	NA	241848203	241889939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241848354_241848730_241849028_241849111_241849217_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_15489.nic	chr1	+	3198	15	NIC	ENSG00000174371.17	novel	3449	16	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_2	28.4529687127974	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	241844762	True	NA	16	True	AATACA	-19	NA	241848156	241889746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_241848354_241848730_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889464
transcript_15494.known	chr1	+	2899	14	FSM	ENSG00000174371.17	ENST00000518483.5	2899	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	45.3133730277048	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTGGGTTGTGGTTTTTT	241848818	False	NA	16	True	AATACA	-19	NA	241848830	241889746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_241849028_241850408_241850587_241852291_241852412_241853357_241853482_241857344_241857483_241858505_241858719_241860516_241860705_241861405_241861503_241866829_241867056_241872031_241872279_241878748_241879344_241881915_241882018_241885313_241885508_241889466
transcript_15495.known	chr1	-	1207	4	FSM	ENSG00000197769.6	ENST00000357246.4	1207	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	1.88561808316413	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTAGGGCTCGGTACTAG	-241999056	True	NA	NA	False	NA	NA	NA	241999098	241995489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_241996386_241998513_241998621_241998775_241998832_241998950
transcript_15498.nnic	chr1	-	1173	3	NNC	ENSG00000180287.17	novel	8900	10	NA	NA	320	-224207	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTTTTGCTAATGT	-242523779	True	NA	NA	False	AATAAA	-27	NA	242524351	242489543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_242490359_242491187_242491282_242524087
transcript_15499.known	chr1	+	766	3	FSM	ENSG00000224525.2	ENST00000421878.2	766	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAAAGCCTGTTTGGTGGTC	NA	False	NA	NA	False	ATTAAA	-17	NA	242203554	242210827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_242203744_242209217_242209336_242210368
transcript_15502.nic	chr1	-	997	7	ISM	ENSG00000143702.16	ENST00000366544.5	6805	19	-63	74652	-36	1534	5prime_fragment	FALSE	canonical	0	0	junction_3	56.4298975130501	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAAGCTGGAACATCAG	NA	False	NA	NA	False	AAAAAG	-37	NA	243255384	243199079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_243199195_243200517_243200681_243200776_243200836_243211885_243211965_243221723_243221814_243225175_243225322_243255039
transcript_15504.known	chr1	-	608	4	FSM	ENSG00000143702.16	ENST00000522995.1	608	4	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_3	66.7149824918578	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGATATGATATCCTTAAA	NA	False	NA	NA	False	NA	NA	NA	243255348	243211894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_243211965_243221723_243221814_243225175_243225322_243255046
transcript_15506.known	chr1	-	582	3	FSM	ENSG00000143702.16	ENST00000523581.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAGCCCATATTCCAAAGAA	NA	False	NA	NA	False	AATAGA	-9	NA	243255216	243221554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_243221814_243225175_243225322_243255039
transcript_15507.known	chr1	+	2581	18	FSM	ENSG00000054282.16	ENST00000366541.8	2581	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	51.8095394083215	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	NA	False	NA	12	True	AATAAA	-16	NA	243256040	243500091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_243256241_243270104_243270258_243270977_243271064_243274542_243274657_243286271_243286398_243293090_243293220_243304712_243304778_243307988_243308178_243316754_243316894_243330539_243330693_243341038_243341174_243344214_243344332_243378720_243378864_243415701_243415830_243417967_243418077_243426426_243426559_243489013_243489141_243499755
transcript_15536.nnic	chr1	+	683	4	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_2	54.3016267405192	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	243485374	True	NA	12	True	AATAAA	-16	NA	243487751	243500091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243487879_243489013_243489141_243497866_243497960_243499755
transcript_15544.known	chr1	+	525	3	FSM	ENSG00000054282.16	ENST00000497459.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	50	2591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTGAGTTGTAATGTTTC	243485437	True	NA	10	True	AATAAA	-14	NA	243487814	243500089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_243487879_243489013_243489141_243499755
transcript_15546.nnic	chr1	+	533	3	NNC	ENSG00000054282.16	novel	525	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	36	junction_1	104.5	915	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	243485374	True	NA	12	True	AATAAA	-16	NA	243487751	243500091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243487822_243489013_243489141_243499755
transcript_15550.nnic	chr1	+	215	2	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	2206	-264	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACATTCATCTGGTTT	243487643	False	NA	8	True	AATAAA	-16	NA	243490020	243499825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243490166_243499755
transcript_15552.nnic	chr1	+	481	2	NNC	ENSG00000054282.16	novel	2581	18	NA	NA	2206	0	at_least_one_novel_splicesite	FALSE	canonical	3	272	junction_1	0	2079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTTGTAATGTTTCCT	243487643	False	NA	12	True	AATAAA	-16	NA	243490020	243500091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_243490166_243499755
transcript_15555.known	chr1	-	2555	13	FSM	ENSG00000035687.10	ENST00000366535.4	2555	13	0	0	0	0	multi-exon	FALSE	canonical	3	647	junction_9	39.0941704946744	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCGTATTGTGTTTT	-244444397	True	NA	-3	True	ATTAAA	-21	NA	244451909	244408493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_244409639_244411286_244411437_244415980_244416079_244417627_244417753_244418759_244418915_244420169_244420297_244422834_244422917_244423952_244424061_244424320_244424388_244432544_244432596_244436824_244436894_244437665_244437769_244451634
transcript_15561.nnic	chr1	+	934	3	NNC	ENSG00000179397.18	novel	2298	16	NA	NA	47	-91851	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTATGCTGTGCCTGGC	244454404	False	NA	NA	False	AATAAA	-45	NA	244454423	244460614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_244454614_244457492_244457570_244459947
transcript_15563.known	chr1	+	4017	5	FSM	ENSG00000121644.19	ENST00000302550.16	4017	5	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_3	48.7801189010441	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTATAGTGCTTTCTTT	244638563	True	NA	NA	False	ATTAAA	-19	NA	244653125	244709033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244653356_244686596_244686670_244689248_244689343_244691878_244692021_244705555
transcript_15564.known	chr1	+	859	4	FSM	ENSG00000121644.19	ENST00000263831.11	859	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	292.613890457868	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGGCGCAGGAGGGAG	244638540	True	NA	NA	False	NA	NA	NA	244653102	244705951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244653356_244686596_244686670_244691883_244692021_244705555
transcript_15568.known	chr1	+	1126	2	FSM	ENSG00000121644.19	ENST00000484738.1	1126	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCTGAGTCGTGGGAA	244638563	True	NA	1	True	AATAAA	-14	NA	244653125	244656521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244654026_244656295
transcript_15569.known	chr1	-	289	1	FSM	ENSG00000232059.3	ENST00000595491.1	289	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAATTTCAACGATGAGTA	-244694701	False	NA	NA	False	NA	NA	NA	244694720	244694431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_244694400_244694700
transcript_15570.known	chr1	-	3207	13	FSM	ENSG00000153187.20	ENST00000440865.2	3207	13	0	0	0	0	multi-exon	FALSE	canonical	2	2271	junction_4	749.468195715394	916	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAGAATTCATTTTACT	-244863040	False	NA	-40	True	AAGAAA	-37	NA	244863106	244853405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_244854504_244854972_244855045_244855423_244855609_244855903_244856159_244856456_244856626_244856727_244856857_244857597_244857718_244858010_244858275_244858728_244858842_244859274_244859375_244860334_244860475_244862460_244862535_244862618
transcript_15576.known	chr1	+	568	5	FSM	ENSG00000203667.10	ENST00000366528.3	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	917.897325412815	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAATCAAGTAAATAAAGTTT	244835537	False	NA	-6	True	CATAAA	-24	NA	244835615	244843252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244835757_244836484_244836521_244841943_244842059_244842194_244842259_244843040
transcript_15590.known	chr1	+	1005	3	FSM	ENSG00000203667.10	ENST00000391839.6	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	845	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATTAAAATATTATTTAAAA	244820726	True	NA	93	True	NA	NA	NA	244835655	244843880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244835757_244842194_244842259_244843040
transcript_15591.known	chr1	+	2290	4	FSM	ENSG00000203667.10	ENST00000498262.1	2290	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	860.254355150589	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTATACTGTGTATTTTT	244820729	True	NA	NA	False	AATAAA	-17	NA	244835658	244845057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244835757_244841943_244842059_244842198_244842259_244843040
transcript_15592.known	chr1	+	535	1	FSM	ENSG00000273175.1	ENST00000610145.1	535	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAAGTTTTCTGTAGCT	244864668	False	NA	NA	False	AATAAA	-14	NA	244864737	244865272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244864700_244865300
transcript_15598.known	chr1	+	906	6	FSM	ENSG00000203666.13	ENST00000473686.5	906	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	48.6028805730689	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGTGGAAGGTGATT	244968512	True	NA	18	True	AATGAA	-37	NA	244970350	245087794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_15602.known	chr1	+	1201	6	FSM	ENSG00000203666.13	ENST00000497591.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	69.1791876217118	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTCAAATCACTTCAATGT	244970275	False	NA	22	True	AATAAA	-35	NA	244970285	245091806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245091026
transcript_15603.known	chr1	+	1389	6	FSM	ENSG00000203666.13	ENST00000487845.5	1389	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	66.0623947492066	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTGGCCTTCTGTGTCTGG	244968551	True	NA	14	True	CATAAA	-15	NA	244970389	245122991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245121919
transcript_15609.known	chr1	+	860	8	FSM	ENSG00000203666.13	ENST00000366521.7	860	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	57.3695503392039	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTACTATTTATTTAAAAAC	244968517	True	NA	NA	False	TTTAAA	-36	NA	244970355	245087556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970444_245002120_245002233_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_15610.known	chr1	+	1233	8	FSM	ENSG00000203666.13	ENST00000366523.6	1418	8	187	-2	-113	2	multi-exon	FALSE	canonical	2	4	junction_1	56.9353374720939	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTATGAGTGCCAATT	244969837	False	NA	11	True	AATAAA	-14	NA	244969868	245087839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_244970044_244970328_244970444_245017241_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245087244
transcript_15611.known	chr1	+	550	6	FSM	ENSG00000203666.13	ENST00000425550.5	550	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	62.3300890421312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTATGTCTTCCTACT	NA	False	NA	NA	False	AATAAA	-16	NA	245017241	245086961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_245017327_245059385_245059459_245082082_245082163_245083441_245083485_245083621_245083689_245086759
transcript_15620.known	chr1	-	1209	6	FSM	ENSG00000185420.19	ENST00000403792.7	1209	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	88.820267957263	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCTCATTCCTAGTGTTA	-246503552	True	NA	NA	False	TATAAA	-45	NA	246507312	246325812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246326396_246327200_246327338_246330479_246330538_246335366_246335475_246355030_246355095_246507053
transcript_15626.nnic	chr1	-	698	4	NNC	ENSG00000185420.19	novel	1042	8	NA	NA	-2580	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	93.5746879354787	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTGGTAATTGTCTT	-245816968	True	NA	-11	True	AATAAA	-22	NA	245816991	245749346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_245749665_245764040_245764150_245814341_245814416_245816794
transcript_15627.nnic	chr1	-	636	3	NNC	ENSG00000185420.19	novel	1565	12	NA	NA	-2592	0	at_least_one_novel_splicesite	TRUE	canonical	1	33	junction_2	83	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCATCTGGTAATTGTCTT	-245816980	True	NA	-11	True	AATAAA	-22	NA	245817003	245749346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_245749665_245764040_245764150_245816794
transcript_15629.known	chr1	-	1042	8	FSM	ENSG00000185420.19	ENST00000470510.5	1042	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	95.4473890770861	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGCCATCTGGTAATTG	NA	False	NA	-15	True	AATAAA	-18	NA	245929937	245749350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_245749665_245764040_245764150_245814341_245814416_245858495_245858671_245863798_245863887_245915529_245915641_245927930_245928034_245929869
transcript_15630.known	chr1	-	368	2	FSM	ENSG00000185420.19	ENST00000490322.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAACATTTGGTTGAGGA	-245814388	False	NA	-31	True	AATAAA	-2	NA	245814411	245749366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_245749665_245814341
transcript_15636.known	chr1	-	1784	8	FSM	ENSG00000162851.8	ENST00000366514.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	16.3132599127088	1042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562898	True	NA	NA	False	ATTAAA	-17	NA	246566261	246540560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246557380_246557535_246564345_246564435_246565825
transcript_15641.nnic	chr1	-	1683	7	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	-53	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_5	54.1984522124223	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562951	True	NA	NA	False	ATTAAA	-17	NA	246566314	246540560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246556572_246556722_246564345_246564435_246565825
transcript_15647.nnic	chr1	-	1483	6	NIC	ENSG00000162851.8	novel	1784	8	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	57.7359506720033	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTTGTGGTTTCTTTTGG	-246562900	True	NA	NA	False	ATTAAA	-17	NA	246566263	246540560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_246541203_246544520_246544682_246548544_246548608_246551212_246551303_246564345_246564435_246565825
transcript_15650.known	chr1	+	5127	11	FSM	ENSG00000162852.14	ENST00000366513.9	5127	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	7.97746827007165	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGCCTTATTTTGTTTTT	246564280	True	NA	16	True	AATAAA	-28	NA	246566455	246668595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246566664_246591511_246591942_246621428_246621635_246631893_246631925_246633923_246634011_246634472_246634588_246641748_246641771_246641940_246642038_246647138_246648038_246660198_246660335_246665699
transcript_15653.nic	chr1	+	1273	3	ISM	ENSG00000162852.14	ENST00000483271.1	2767	8	-3	26187	-3	-11909	5prime_fragment	FALSE	canonical	3	83	junction_2	5.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTGTGTCCCACTCATC	246564265	True	NA	NA	False	AATAAA	-37	NA	246566440	246622048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_246566664_246591511_246591942_246621428
transcript_15654.nic	chr1	+	718	2	ISM	ENSG00000162852.14	ENST00000366511.1	645	4	-73	41951	-3	-41951	5prime_fragment	FALSE	canonical	3	94	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTTTACTGTCCTGC	246564265	True	NA	NA	False	ATTAAA	-22	NA	246566440	246592006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_246566664_246591511
transcript_15657.known	chr1	+	2141	12	FSM	ENSG00000143653.10	ENST00000366510.4	2141	12	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	25.7681974534503	454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTTGTTCATTACCTAA	246721467	True	NA	NA	False	AATAAA	-19	NA	246724408	246768137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246724613_246726891_246727005_246735974_246736056_246740171_246740302_246744075_246744126_246758225_246758357_246759033_246759152_246759956_246760077_246760170_246760228_246764245_246764358_246766057_246766140_246767194
transcript_15663.nic	chr1	-	1878	4	ISM	ENSG00000153207.16	ENST00000366508.5	8751	36	80545	1444	-969	420	3prime_fragment	FALSE	canonical	3	271	junction_2	9.0921211313239	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTTTGTGTCTTGGATTT	-246850806	False	NA	-4	True	AATAAA	-15	NA	246850818	246840541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_246840999_246842693_246842777_246843794_246843929_246849614
transcript_15664.known	chr1	+	1220	3	FSM	ENSG00000227953.7	ENST00000670093.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTGAATCGTGATAGCA	NA	False	NA	NA	False	NA	NA	NA	246789103	246792280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_246789699_246790445_246790847_246792056
transcript_15665.known	chr1	-	7041	26	FSM	ENSG00000153207.16	ENST00000470300.5	7041	26	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	78.7190853605401	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTTGCTACAACATTTTA	-246899459	False	16	-14	True	AATAAA	-18	NA	246899480	246839097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246840999_246843794_246843929_246849614_246851443_246853090_246853300_246855729_246855828_246857690_246857815_246860898_246861296_246861958_246862154_246863923_246864117_246865254_246865334_246867243_246867352_246867660_246867812_246876036_246876188_246876949_246877082_246877157_246877303_246885492_246885681_246887210_246887358_246888176_246888234_246888393_246888518_246889965_246890060_246890955_246891061_246891778_246891920_246894658_246894749_246895834_246895926_246898207_246898337_246899450
transcript_15667.nnic	chr1	-	504	4	NIC	ENSG00000197472.15	novel	885	6	NA	NA	-3	17659	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	86.2567227653719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCAGGTGGTT	-247003246	True	NA	NA	False	ATTAAA	-18	NA	247008060	246967663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_246967793_246999347_246999441_246999947_247000075_247007905
transcript_15687.known	chr1	-	504	4	FSM	ENSG00000197472.15	ENST00000498046.2	504	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	37.0435179514881	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAATCTATTTCTGATGA	-247003212	True	NA	-43	True	ATTAAA	-12	NA	247008026	246945677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_247007905
transcript_157.known	SIRV1	-	1363	6	FSM	SIRV1A	SIRV103	1363	6	0	0	0	0	multi-exon	FALSE	canonical	3	1470	junction_5	2371.66899882762	9184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10791	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10647
transcript_15700.known	chr1	-	885	6	FSM	ENSG00000197472.15	ENST00000479214.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.6182082145441	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTTTCTTTTTT	-247003242	True	NA	88	True	AATAGA	-20	NA	247008056	246945546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246945828_246967694_246967793_246988120_246988256_246999347_246999441_246999947_247000075_247007905
transcript_15701.known	chr1	-	826	6	FSM	ENSG00000197472.15	ENST00000487338.6	826	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	76.5365272272005	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATCTATTTCTGATGAATA	-247003279	True	NA	-40	True	ATTAAA	-15	NA	247008093	246945674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246945828_246967694_246967793_246988124_246988256_246999347_246999441_246999911_247000075_247007905
transcript_15702.known	chr1	-	3341	4	FSM	ENSG00000197472.15	ENST00000339986.8	3341	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	45.7116566704332	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGTGTATTTCTGAATCT	-247003243	True	NA	NA	False	AATAAA	-24	NA	247008057	246985322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_246988256_246999347_246999441_246999911_247000075_247007905
transcript_15706.known	chr1	-	4197	4	FSM	ENSG00000277462.2	ENST00000366503.3	4197	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	17.5562587763516	304	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTGGCCTTGAGTGTTTT	-247075983	True	NA	-2	True	NA	NA	NA	247078811	247034636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247038428_247038809_247038871_247039410_247039538_247078593
transcript_15709.nnic	chr1	-	1597	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-44	1928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.4353490404331	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCGTGAGTTCTTTGC	-247101586	True	NA	-10	True	CATAAA	-16	NA	247104416	247098033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247098292_247100388_247101320_247101730_247101792_247101986_247102114_247104196
transcript_15710.nnic	chr1	-	891	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-44	1931	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.4353490404331	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTGAGTTCTTTGCATT	-247101586	True	NA	-7	True	CATAAA	-19	NA	247104416	247098030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247098451_247101256_247101320_247101730_247101792_247101986_247102114_247104196
transcript_15711.nnic	chr1	-	1750	5	NNC	ENSG00000188295.15	novel	1706	4	NA	NA	-44	1928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.4353490404331	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTCGTGAGTTCTTTGC	-247101586	True	NA	-10	True	CATAAA	-16	NA	247104416	247098033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247098316_247100259_247101320_247101730_247101792_247101986_247102114_247104196
transcript_15714.known	chr1	-	1951	4	FSM	ENSG00000188295.15	ENST00000343381.10	1951	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.6599986661331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAAATAAAAAAATAA	-247101542	True	NA	NA	False	NA	NA	NA	247104372	247099990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247101320_247101730_247101792_247101986_247102114_247103938
transcript_15715.known	chr1	-	730	4	FSM	ENSG00000188295.15	ENST00000366501.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.522013940528	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACGAATGTAAGGAATGT	-247104260	False	NA	NA	False	AATACA	-27	NA	247104278	247100855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247101320_247101730_247101792_247101990_247102114_247104196
transcript_15718.known	chr1	-	489	3	FSM	ENSG00000188295.15	ENST00000366500.5	489	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGATAATGCACAGTGGA	-247104271	False	NA	NA	False	NA	NA	NA	247104289	247101050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247101320_247101986_247102114_247104196
transcript_15724.nnic	chr1	-	678	5	NNC	ENSG00000196418.13	novel	2776	4	NA	NA	-47	4	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	58.5192276093935	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCTGCTGTTCATTATT	NA	False	NA	-27	True	AATAAA	-23	NA	247172067	247154984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247155125_247155565_247155696_247159005_247159067_247159686_247159814_247171847
transcript_15726.known	chr1	-	2776	4	FSM	ENSG00000196418.13	ENST00000543802.3	2776	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	44.2894519672072	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTTTCCTGCTGTTCAT	-247171881	True	NA	-31	True	AATAAA	-19	NA	247172020	247154988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247157404_247159005_247159067_247159686_247159814_247171847
transcript_15727.known	chr1	-	2243	4	FSM	ENSG00000196418.13	ENST00000472531.5	2243	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.0911166455055	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCAGCTATCCTTATATTT	-247171866	True	NA	-2	True	AATAAA	-16	NA	247172005	247121974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247123872_247159005_247159067_247159686_247159814_247171847
transcript_15729.known	chr1	-	956	4	FSM	ENSG00000196418.13	ENST00000491356.5	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	54.485472069779	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAGTAGAATGATTT	-247171863	True	NA	-12	True	AATAAA	-17	NA	247172002	247138144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247138758_247159005_247159067_247159686_247159814_247171847
transcript_15735.known	chr1	-	1674	4	FSM	ENSG00000196418.13	ENST00000340684.10	1674	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	35.1093529798922	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAATTGAGGTG	-247171877	True	NA	NA	False	AATATA	-18	NA	247172016	247155900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247157218_247159005_247159067_247159686_247159814_247171847
transcript_15737.nnic	chr1	-	623	4	NNC	ENSG00000196418.13	novel	2776	4	NA	NA	-47	420	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	55.4156014935225	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAAAGTGTGTTGGTTAT	NA	False	NA	-4	True	AATAAA	-18	NA	247172067	247155480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247155696_247159005_247159067_247159686_247159814_247171847
transcript_15740.known	chr1	-	701	4	FSM	ENSG00000196418.13	ENST00000491848.1	701	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	44.2141254452566	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATGGAATGTGGCAAAGC	-247171866	True	NA	NA	False	NA	NA	NA	247172005	247156916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247157218_247159005_247159067_247159686_247159868_247171847
transcript_15741.nnic	chr1	-	753	4	NNC	ENSG00000196418.13	novel	2243	4	NA	NA	-47	-671	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	56.3461523876199	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGGGTTGTCATTTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	247172067	247157587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247157933_247159005_247159067_247159686_247159814_247171847
transcript_15742.known	chr1	-	1246	1	FSM	ENSG00000259865.1	ENST00000566446.1	1246	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTTTGTGGTGAAAA	-247188515	False	NA	-3	True	ATTAAA	-24	NA	247188526	247187280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247187300_247188500
transcript_15745.nnic	chr1	-	707	5	NNC	ENSG00000227671.4	novel	430	4	NA	NA	-16	-927	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	5.02493781056044	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATCGTCAAATCTAAAT	-247207694	True	NA	NA	False	AATAAA	-17	NA	247210872	247190777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247191015_247199359_247199456_247200066_247200194_247202015_247202081_247210690
transcript_15746.nnic	chr1	-	730	5	NNC	ENSG00000227671.4	novel	430	4	NA	NA	-24	-927	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	4.49305018890286	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAATCGTCAAATCTAAAT	-247207702	True	NA	NA	False	AATAAA	-17	NA	247210880	247190777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_247191015_247199359_247199456_247200066_247200194_247202015_247202096_247210690
transcript_15753.known	chr1	-	660	2	FSM	ENSG00000227671.4	ENST00000606454.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGATGGCATTCATTGCCT	-247207644	True	NA	24	True	AAGAAA	-14	NA	247210822	247201567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247202096_247210690
transcript_15754.nnic	chr1	-	1493	2	Fusion	ENSG00000232347.1_ENSG00000227671.4	novel	706	4	NA	NA	-24	2295	multi-exon	FALSE	canonical	2	2	junction_1	0	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGCTGGATTCTTCAAAC	-247207702	True	NA	-16	True	AATAAA	-17	NA	247210880	247208395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_-_247209699_247210690
transcript_15757.known	chr1	-	1367	3	FSM	ENSG00000196772.5	ENST00000641093.1	1367	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAATTAATTACATTTTTC	-247824071	True	NA	NA	False	AAAAAG	-39	NA	247824119	247814659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_247815745_247819062_247819178_247823952
transcript_15759.known	chr1	-	3148	7	FSM	ENSG00000175137.11	ENST00000366472.6	3148	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	10.85382677011	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTACTGTCCTTGCTGGA	-248824308	True	NA	-1	True	AATAAA	-21	NA	248825915	248810445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248812371_248812988_248813163_248814448_248814611_248816533_248816663_248816821_248816885_248824752_248825367_248825834
transcript_15760.nnic	chr1	+	735	4	NNC	ENSG00000171161.13	novel	3045	4	NA	NA	-5	-760	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	77.8502836646513	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATGCTCCCGTTTTTACC	248835947	True	NA	22	True	NA	NA	NA	248838218	248846341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_248838552_248844482_248844637_248845565_248845663_248846190
transcript_15761.known	chr1	+	3045	4	FSM	ENSG00000171161.13	ENST00000306562.8	3045	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	16.8193010820572	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAAGTGCCGCCTTTATC	248835952	True	NA	20	True	AATAAA	-18	NA	248838223	248849517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_248838552_248844482_248844637_248845565_248845663_248847051
transcript_15763.known	chr1	-	1916	12	FSM	ENSG00000171163.16	ENST00000412341.6	1916	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	82.5009892252238	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTCCTAAAGGACAAAAT	-248857401	True	NA	-41	True	NA	NA	NA	248859068	248850044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248850517_248850681_248850782_248850862_248850948_248853936_248854052_248855379_248855459_248855557_248855947_248856372_248856423_248856513_248856563_248857233_248857437_248857827_248857860_248858130_248858322_248858917
transcript_15765.known	chr1	-	2065	12	FSM	ENSG00000171163.16	ENST00000451251.5	2065	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.1827525499814	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGAGCTGGACTACTTT	-248858850	False	1667	-62	True	NA	NA	NA	248858860	248850065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858511
transcript_15766.known	chr1	-	1942	12	FSM	ENSG00000171163.16	ENST00000306601.9	1942	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	61.6887682826575	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGTGTGGGCAGAGCAA	-248857418	True	NA	-4	True	AATAAA	-15	NA	248859085	248850007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248850517_248850681_248850782_248853936_248854052_248855379_248855459_248855557_248855636_248855724_248855947_248856287_248856423_248856513_248856563_248857233_248857498_248857827_248857860_248858130_248858322_248858917
transcript_15788.known	chr1	-	656	4	FSM	ENSG00000171163.16	ENST00000496231.1	656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.8686350154327	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCAAGCCAGCCTCCCT	-248857400	True	NA	NA	False	NA	NA	NA	248859067	248857312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_248857498_248857827_248857860_248858130_248858420_248858917
transcript_15795.known	chr1	+	2717	3	FSM	ENSG00000185220.12	ENST00000329291.6	2717	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	2	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCCTGTTGTGCTAGCA	248904986	True	NA	8	True	ATTAAA	-16	NA	248906234	248919146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_248906343_248913815_248913880_248916601
transcript_158.known	SIRV1	-	1300	4	FSM	SIRV1A	SIRV102	1300	4	0	0	0	0	multi-exon	FALSE	canonical	3	4783	junction_1	1017.87261809456	4892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTGAATCGATGCATAC	NA	False	NA	NA	False	NA	NA	NA	10366	1006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_6337_6814_7552_7815_10282
transcript_15800.known	chr1	+	2879	3	FSM	ENSG00000185220.12	ENST00000355360.8	2879	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	21.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCACTGCATCCTCTGTCT	248904947	True	NA	NA	False	NA	NA	NA	248906195	248919946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_248906343_248913815_248913880_248917278
transcript_15804.nnic	chr1	+	800	4	Fusion	ENSG00000185220.12_ENSG00000233084.2	novel	2879	3	NA	NA	14	62	multi-exon	FALSE	canonical	3	5	junction_3	25.2234458831902	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTTTCATAAGAATG	248904961	True	NA	NA	False	CATAAA	-5	NA	248906209	248937105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_248906343_248913815_248913880_248930112_248930192_248936581
transcript_15805.nnic	chr1	+	721	3	Fusion	ENSG00000185220.12_ENSG00000233084.2	novel	2879	3	NA	NA	14	62	multi-exon	FALSE	canonical	1	1	junction_2	29	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTTTTTCATAAGAATG	248904961	True	NA	NA	False	CATAAA	-5	NA	248906209	248937105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_248906343_248913815_248913880_248936581
transcript_15808.known	chr10	+	4020	15	FSM	ENSG00000015171.20	ENST00000627286.2	4020	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_7	42.4461243152747	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAATGTATTTAAAAAAA	134461	True	NA	-1	True	AATATA	-30	NA	135507	254613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_135560_179993_180129_209888_210049_221194_221357_236837_236916_237584_237678_239437_239526_240058_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_15809.known	chr10	+	3898	14	FSM	ENSG00000015171.20	ENST00000381607.8	3898	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	33.102673339906	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAACTAGCTTTAGTA	134437	True	NA	12	True	AATAAA	-8	NA	135483	254626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_135560_179993_180129_209888_210049_236837_236916_237584_237678_239437_239526_240055_240112_240892_240971_242020_242140_246765_246974_247397_247467_248335_248609_248902_249089_252347
transcript_15812.known	chr10	+	4656	17	FSM	ENSG00000107937.19	ENST00000360803.9	4656	17	0	0	0	0	multi-exon	FALSE	canonical	1	255	junction_14	133.385191738064	825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACACTTTCTTTGGTAAT	981154	True	NA	NA	False	AATAAA	-23	NA	988433	1019932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_988528_992488_992660_995928_996033_996105_996243_997207_997309_999002_999096_1000676_1000869_1000947_1001014_1005817_1005908_1007017_1007129_1008957_1009036_1009528_1009581_1010419_1010521_1012464_1012663_1014246_1014313_1015752_1015897_1017074
transcript_15827.known	chr10	-	3370	5	FSM	ENSG00000067064.12	ENST00000429642.2	3370	5	0	0	0	0	multi-exon	TRUE	canonical	2	45	junction_4	381.843554351779	695	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCTCCCTGGGGACA	-1035570	True	NA	NA	False	NA	NA	NA	1048883	1039151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_1041505_1042631_1042763_1043300_1043394_1043998_1044172_1048263
transcript_15829.known	chr10	+	1101	4	FSM	ENSG00000232656.9	ENST00000428780.3	1101	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTTTTCTGAATGTCATA	1022611	False	NA	NA	False	ATTAAA	-26	NA	1022629	1044207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_1022784_1035813_1035977_1036788_1036894_1043528
transcript_15832.known	chr10	+	5137	14	FSM	ENSG00000047056.17	ENST00000263150.9	5137	14	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	13.6520583878349	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCTTCATCCCTCATCA	1056342	True	NA	NA	False	ATTAAA	-14	NA	1056384	1132372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_1056969_1072115_1072294_1077906_1078004_1080010_1080107_1080411_1080477_1084402_1084539_1086285_1086358_1093451_1093497_1096169_1096247_1103601_1103837_1105125_1105268_1124217_1124353_1124909_1125025_1129212
transcript_15838.nnic	chr10	+	878	2	NNC	ENSG00000047056.17	novel	4582	14	NA	NA	-473	-45648	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCCAGTTCTGGGTCAT	1048803	True	NA	NA	False	AATAAA	-19	NA	1049064	1050598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_1049642_1050297
transcript_15839.nic	chr10	-	1218	6	NIC	ENSG00000185736.16	novel	8475	10	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	2.36643191323985	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACAAATTCAGAACGTGC	NA	False	NA	-13	True	NA	NA	NA	1240594	1183042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_1183370_1184860_1185040_1199965_1200148_1216950_1217120_1233693_1233846_1240385
transcript_15842.known	chr10	-	1464	2	FSM	ENSG00000287560.1	ENST00000658425.1	1464	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTGCACGTATGTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	3047083	3042534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3043735_3046819
transcript_15843.known	chr10	-	3374	27	FSM	ENSG00000107959.17	ENST00000678987.1	3374	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	42.9490547250478	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGACTTAACCTCTGCT	-3167233	True	NA	-13	True	AATAAA	-6	NA	3172789	3137739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165331_3165412_3165484_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15844.known	chr10	-	3427	27	FSM	ENSG00000107959.17	ENST00000224949.9	3427	27	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_23	20.5429626298026	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGCTTGAGTCATTATT	-3167226	True	NA	-1	True	AATAAA	-18	NA	3172782	3137727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3138125_3138234_3138338_3138903_3139050_3140686_3140813_3143388_3143502_3144291_3144367_3145595_3145717_3147149_3147251_3147571_3147738_3147986_3148064_3148170_3148292_3149620_3149754_3151246_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15846.known	chr10	+	2626	22	FSM	ENSG00000067057.18	ENST00000381125.9	2626	22	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	137.885357750873	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCCTCTGTTTTAGTTTT	3057807	True	NA	31	True	ATTAAA	-20	NA	3067547	3136802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_3067708_3082387_3082462_3099274_3099353_3101364_3101555_3103778_3103945_3105114_3105160_3105392_3105502_3107213_3107310_3108700_3108794_3109354_3109481_3112221_3112287_3113118_3113189_3113371_3113519_3116775_3116847_3118781_3118870_3119891_3120045_3129818_3129984_3132379_3132442_3133202_3133315_3134482_3134583_3135735_3135839_3136449
transcript_15850.known	chr10	-	1844	15	FSM	ENSG00000107959.17	ENST00000430362.2	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_11	20.3034379314621	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTAGAGTCATGTCTTGG	-3172793	False	NA	NA	False	ATTAAA	-18	NA	3172807	3151175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3151364_3155590_3155730_3156929_3157065_3157434_3157532_3158039_3158154_3158913_3159043_3159847_3159937_3160203_3160331_3163724_3163886_3165237_3165335_3165412_3165528_3166228_3166381_3166935_3167043_3170103_3170207_3172716
transcript_15858.known	chr10	+	143	2	FSM	ENSG00000067057.18	ENST00000495715.1	143	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTGCGGGTACGAATGGA	3067651	False	NA	NA	False	NA	NA	NA	3067671	3069380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_3067708_3069273
transcript_15860.known	chr10	-	4590	4	FSM	ENSG00000067082.15	ENST00000497571.6	4590	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	20.9284495364563	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGTTACATCTCTTTTT	-3781943	True	NA	NA	False	AATAAA	-18	NA	3785209	3775995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3779591_3780105_3780230_3781640_3782215_3784912
transcript_15862.known	chr10	-	4537	3	FSM	ENSG00000067082.15	ENST00000542957.1	4537	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	77	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGTTACATCTCTTTT	-3782015	True	NA	NA	False	AATAAA	-17	NA	3785281	3775996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_3779591_3781640_3782215_3784912
transcript_15863.known	chr10	+	1613	10	FSM	ENSG00000165568.18	ENST00000298375.12	1613	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	2.72618758808562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATTTTAATTTCTTTT	4825820	True	NA	NA	False	AATAAA	-24	NA	4826206	4848062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4839728_4839827_4841784_4841858_4842420_4842505_4847147_4847231_4847487
transcript_15866.known	chr10	+	844	7	FSM	ENSG00000165568.18	ENST00000532248.5	844	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.40947204913349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTATTTATCATACACAT	4825909	True	NA	NA	False	AATATA	-25	NA	4826295	4847296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4837458_4837582_4842420_4842505_4847147
transcript_15868.known	chr10	+	913	7	FSM	ENSG00000165568.18	ENST00000345253.9	913	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	3.02305952453618	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTCTACTCTGAACAAATA	4825909	True	NA	NA	False	NA	NA	NA	4826295	4847745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_4826364_4830674_4830843_4833349_4833467_4835674_4835810_4842420_4842505_4847147_4847231_4847487
transcript_15875.known	chr10	+	6543	9	FSM	ENSG00000187134.14	ENST00000380872.9	6543	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.09076704298839	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTATGTTAAGAGGGTT	4963312	True	NA	NA	False	AATAAA	-16	NA	4963414	4983283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_4963529_4965913_4966082_4966926_4967044_4968308_4968387_4968821_4968945_4972200_4972311_4972583_4972750_4975850_4975934_4977699
transcript_15877.known	chr10	-	3756	9	FSM	ENSG00000151632.18	ENST00000380753.9	3215	9	-166	-375	0	375	multi-exon	FALSE	canonical	1	1	junction_7	5.37209223673607	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGGCACAAGTGACTC	NA	False	NA	NA	False	TATAAA	-35	NA	5004023	4987399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_4990039_4991830_4991914_4995318_4995485_4995755_4995866_4998624_4998748_4999199_4999278_5000549_5000667_5001513_5001682_5003751
transcript_15878.known	chr10	-	1481	8	FSM	ENSG00000151632.18	ENST00000421196.7	1481	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	6.03391773769796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGATGGGAGGGCACCAG	-5003819	True	NA	NA	False	NA	NA	NA	5003860	4989433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_4990039_4991830_4991914_4995318_4995485_4995755_4995866_4998624_4998748_5000549_5000667_5001513_5001682_5003751
transcript_15883.nnic	chr10	+	1458	10	NIC	ENSG00000196139.14	novel	1405	9	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	39.6954455203834	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5035154	True	NA	14	True	AATAAA	-21	NA	5035307	5107686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_5035617_5077899_5077978_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_15885.nic	chr10	+	1400	9	NIC	ENSG00000196139.14	novel	859	6	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	31.5792653492763	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	NA	False	NA	14	True	AATAAA	-21	NA	5035287	5107686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_5035617_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_15886.known	chr10	+	1186	9	FSM	ENSG00000196139.14	ENST00000380554.5	1186	9	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_7	6.96419413859206	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAATGTTTTCTCAAAGAT	5093970	True	NA	14	True	AATAAA	-21	NA	5094413	5107686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5094529_5096409_5096578_5097433_5097551_5098801_5098880_5099326_5099450_5102100_5102211_5102484_5102651_5105594_5105678_5107460
transcript_15887.known	chr10	+	3989	12	FSM	ENSG00000173848.19	ENST00000355029.9	3989	12	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_3	63.8880736163896	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTGTGTTTGAGAGCAT	5408482	True	NA	NA	False	ATTAAA	-20	NA	5412556	5459056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5412821_5426654_5426722_5429169_5429230_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_15891.known	chr10	+	3253	10	FSM	ENSG00000173848.19	ENST00000380359.3	3253	10	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	88.0670339521878	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTGAAGGTTTCTTGC	5443018	True	NA	16	True	ATTAAA	-23	NA	5446610	5458463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5446859_5451829_5451938_5452357_5452526_5452857_5452921_5453249_5453347_5453483_5453561_5454264_5454523_5454947_5455119_5456086_5456274_5456587
transcript_15896.known	chr10	-	874	1	FSM	ENSG00000178372.8	ENST00000380332.5	874	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCTTGGTGTTTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	5499570	5498696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5498700_5499600
transcript_15897.nic	chr10	-	1398	7	NIC	ENSG00000196372.13	novel	2717	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	35.4843470968382	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTTCACACGACTC	-5665332	True	NA	-16	True	AATAAA	-20	NA	5666600	5638866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_5639372_5640695_5640831_5641769_5641962_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_15898.known	chr10	-	2780	7	FSM	ENSG00000196372.13	ENST00000459912.5	2780	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	47.9223909624254	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCTGTGTTCACACGACT	-5665310	True	NA	-17	True	AATAAA	-19	NA	5666578	5638867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5640831_5641769_5641962_5642472_5642554_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_159.known	SIRV1	+	464	3	FSM	SIRV1B	SIRV109	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	3912	junction_2	265	9689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTTCGGCTAATCATGT	NA	False	NA	NA	False	NA	NA	NA	10711	11643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_+_10792_10882_11058_11434
transcript_15901.known	chr10	-	2717	6	FSM	ENSG00000196372.13	ENST00000357700.11	2717	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	12.4482930556763	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGTGTTCACACGACTC	-5665327	True	NA	-16	True	AATAAA	-20	NA	5666595	5638866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5640831_5641769_5641962_5648969_5649105_5651212_5651364_5652862_5653051_5666508
transcript_15902.nnic	chr10	-	743	2	NNC	ENSG00000196372.13	novel	2717	6	NA	NA	-9	-15689	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCATTCCCTATGGACG	-5665336	True	NA	NA	False	AATAAA	-30	NA	5666604	5664660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_5665308_5666508
transcript_15903.known	chr10	+	8626	21	FSM	ENSG00000108021.20	ENST00000328090.9	8626	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	53.5597563474667	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTTTCTGCAATGATTTT	5678637	True	NA	5	True	AATAAA	-16	NA	5684837	5763740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_5685176_5712822_5712919_5717658_5717751_5720543_5720669_5720754_5720775_5720870_5720971_5723676_5723778_5724429_5724534_5726884_5726958_5727060_5727124_5730486_5731204_5735303_5735547_5739617_5740498_5742096_5742527_5746178_5750028_5756612_5756739_5757519_5757674_5758886_5758993_5761289_5761472_5762531_5762647_5763028
transcript_15907.known	chr10	-	2297	11	FSM	ENSG00000057608.17	ENST00000380191.9	2297	11	0	0	0	0	multi-exon	FALSE	canonical	3	1853	junction_4	86.1605478162715	1521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCCGGTGTTGGTTTGTG	-5766889	True	NA	-5	True	AATAAA	-19	NA	5813434	5765222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5766153_5766240_5766296_5766493_5766639_5768212_5768385_5773841_5773942_5785141_5785274_5785851_5786051_5794884_5795020_5796762_5796863_5800597_5800706_5813213
transcript_15908.known	chr10	-	1694	7	FSM	ENSG00000134470.21	ENST00000534292.5	1694	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	2.54405625374562	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTTAAAATGCATTAAG	-5977955	True	NA	NA	False	AATAAA	-15	NA	5978045	5952385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5963742_5963842_5966144_5966340_5977776
transcript_15909.known	chr10	-	1581	6	FSM	ENSG00000134470.21	ENST00000532948.5	1581	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	3.86781592116274	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAATATTTTTAAAATG	-5977948	False	NA	NA	False	AATAAA	-8	NA	5978038	5952392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5966144_5966340_5977776
transcript_15910.known	chr10	-	1022	5	FSM	ENSG00000134470.21	ENST00000379974.1	1022	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.11737237261468	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCACCTGCCTGCCTGTCG	NA	False	NA	NA	False	NA	NA	NA	5978179	5952897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_5953207_5956378_5956455_5959753_5959787_5960366_5960568_5977776
transcript_15912.known	chr10	+	3275	12	FSM	ENSG00000134453.16	ENST00000379888.9	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_4	60.748499284256	1113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTGGCAAGTTTCCGT	6079142	True	NA	NA	False	AATAAA	-25	NA	6089033	6117447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6089194_6097047_6097189_6101270_6101388_6104930_6105098_6106140_6106239_6108685_6108743_6109985_6110128_6112209_6112362_6113507_6113582_6114048_6114148_6115238_6115312_6115452
transcript_15915.known	chr10	+	587	6	FSM	ENSG00000170525.21	ENST00000639949.1	587	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	68.0928777479701	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCCAATATCATGGTAAGA	6163548	True	NA	NA	False	NA	NA	NA	6163832	6217177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6164012_6213622_6213749_6215220_6215318_6216124_6216192_6216705_6216781_6217134
transcript_15916.known	chr10	-	438	2	FSM	ENSG00000213994.3	ENST00000427630.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGAGCTTTTTGTGTAT	-6202673	True	NA	NA	False	AATAAA	-14	NA	6202693	6197611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_6197796_6202439
transcript_15917.known	chr10	-	3255	18	FSM	ENSG00000065675.16	ENST00000263125.10	3255	18	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_14	11.9560903679176	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCTTAATCGTTTAC	-6579075	True	NA	-5	True	AATAAA	-11	NA	6580276	6427147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_6428363_6430809_6430939_6441892_6442082_6456673_6456813_6462302_6462366_6464312_6464405_6478991_6479166_6483439_6483601_6485151_6485270_6486034_6486145_6491682_6491813_6497034_6497121_6497219_6497252_6498395_6498559_6507435_6507497_6510994_6511195_6515017_6515145_6580210
transcript_15918.nic	chr10	+	944	4	NIC	ENSG00000237943.8	novel	1263	3	NA	NA	-34	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_3	14.7196014438797	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAGTGTCAATTT	6579369	True	NA	NA	False	AATAAA	-15	NA	6580471	6584298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_6580928_6582137_6582202_6583675_6583919_6584117
transcript_15919.known	chr10	+	1263	3	FSM	ENSG00000237943.8	ENST00000613651.2	1263	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCAGAAAATAGCTCTAAAC	6579459	False	NA	NA	False	AAAAAG	-28	NA	6580561	6584508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6580928_6582137_6582202_6583675
transcript_15920.nic	chr10	+	876	3	NIC	ENSG00000237943.8	novel	1263	3	NA	NA	-30	-1	combination_of_known_junctions	FALSE	canonical	3	16	junction_2	21.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGTCTAGTGTCAATTT	6579373	True	NA	NA	False	AATAAA	-15	NA	6580475	6584298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_6580928_6583675_6583919_6584117
transcript_15921.known	chr10	+	1254	2	FSM	ENSG00000237943.8	ENST00000667809.1	1254	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACCCTCCTCTTGGGGAG	6579453	True	NA	NA	False	NA	NA	NA	6580555	6584557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6580928_6583675
transcript_1593.known	chr1	+	456	2	FSM	ENSG00000230679.1	ENST00000442636.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATGTACTTGAATTTAA	8878723	True	NA	NA	False	ACTAAA	-39	NA	8878834	8879894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_8878961_8879564
transcript_15933.known	chr10	+	2529	2	FSM	ENSG00000223784.2	ENST00000650334.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTAATTTTACTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	6737275	6740532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_6737629_6738356
transcript_15945.nnic	chr10	+	430	2	NNC	ENSG00000238266.2	novel	3105	2	NA	NA	5546	-5867	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATTCGTGTCATTTATT	6799897	True	NA	NA	False	AAAACA	-16	NA	6800285	6873583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_6800440_6873307
transcript_15948.known	chr10	-	6360	13	FSM	ENSG00000151657.12	ENST00000379562.9	6360	13	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_10	17.0299980426697	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTATTACTCAGAAATGG	-7784554	True	NA	0	True	AATAAA	-21	NA	7787993	7750961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_7756143_7759889_7759991_7762456_7762557_7763722_7763792_7766052_7766104_7769215_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_1595.known	chr1	-	1781	12	FSM	ENSG00000074800.16	ENST00000234590.10	1781	12	0	0	0	0	multi-exon	FALSE	canonical	3	14937	junction_8	1512.45105651294	89093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGTGTGCCTGTGTATGT	-8636993	True	NA	-24	True	AATAAA	-25	NA	8878686	8860999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870451_8870511_8871890_8871987_8874823_8874918_8878579
transcript_1596.known	chr1	-	557	6	FSM	ENSG00000074800.16	ENST00000646680.1	557	6	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	6682.88954270531	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCATGCTGGCAACAAG	-8637027	True	NA	NA	False	NA	NA	NA	8878720	8866479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8866502_8867116_8867251_8867987_8868058_8871890_8871987_8874823_8874918_8878579
transcript_15960.nic	chr10	-	842	8	ISM	ENSG00000151657.12	ENST00000379562.9	6360	13	-11	18281	-11	-8010	5prime_fragment	FALSE	canonical	3	181	junction_5	14.9325011915866	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTGCACTGGATGAAAT	-7784565	True	NA	-27	True	AAAAAG	-1	NA	7788004	7769242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_7769346_7774830_7774892_7775750_7775800_7778837_7779020_7780055_7780179_7780263_7780308_7783080_7783176_7787819
transcript_1597.known	chr1	-	536	4	FSM	ENSG00000074800.16	ENST00000486051.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8213.27094132146	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGATTTTAAGAGTGGCT	-8636995	True	NA	NA	False	AAGAAA	-7	NA	8878688	8870171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8870409_8871890_8871987_8874823_8874918_8878579
transcript_15972.known	chr10	+	1096	9	FSM	ENSG00000165629.20	ENST00000493053.5	1096	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1285.63979694936	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765627	True	NA	NA	False	AATAAA	-16	NA	7788146	7807801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_1598.known	chr1	-	1782	12	FSM	ENSG00000074800.16	ENST00000647408.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6788.30886448675	6486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCGTGTGCCTGTGTAT	-8636996	True	NA	-26	True	AATAAA	-23	NA	8878689	8861001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_8861430_8862886_8862946_8863234_8863344_8863890_8864093_8865284_8865483_8866278_8866502_8867116_8867251_8867987_8868058_8870824_8870884_8871890_8871987_8874823_8874918_8878579
transcript_15984.known	chr10	+	1101	10	FSM	ENSG00000165629.20	ENST00000356708.12	1101	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	951.998495693386	17793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7765657	True	NA	NA	False	AATAAA	-16	NA	7788176	7807801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7806973_7807011_7807658
transcript_15985.known	chr10	+	1078	9	FSM	ENSG00000165629.20	ENST00000335698.4	1078	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1313.22212872575	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATATATAAGAACAATAGATA	7765657	True	NA	NA	False	AATAAA	-30	NA	7788176	7807815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026_7800092_7802269_7802426_7802757_7802855_7807658
transcript_15986.known	chr10	+	292	4	FSM	ENSG00000165629.20	ENST00000465936.5	292	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1365.45702564705	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAAAATCATTGTTTTTC	7765659	True	NA	NA	False	AATAAA	-8	NA	7788178	7807793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7806973_7807011_7807658
transcript_15987.known	chr10	+	622	6	FSM	ENSG00000165629.20	ENST00000460820.6	622	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1245.99865168466	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCCCATCTTTTCCCTT	7765664	True	NA	NA	False	NA	NA	NA	7788183	7800052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7788264_7796120_7796156_7797046_7797179_7798989_7799195_7799771_7799916_7800026
transcript_15988.known	chr10	+	460	4	FSM	ENSG00000165629.20	ENST00000480528.1	460	4	0	0	0	0	multi-exon	FALSE	canonical	3	2646	junction_3	181.358454142311	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGTTTTTCTTATATAT	7802210	False	NA	NA	False	AATAAA	-16	NA	7802242	7807801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7802426_7802757_7802855_7806973_7807011_7807658
transcript_15990.nic	chr10	+	1149	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-6	14898	-6	-14898	5prime_fragment	FALSE	canonical	3	31	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACCTGGACGTTCCAAGAG	NA	False	NA	NA	False	AAGAAA	-6	NA	7818490	7964440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15993.nic	chr10	+	2327	3	ISM	ENSG00000165632.9	ENST00000687671.1	4543	4	-6	13720	-6	-13720	5prime_fragment	FALSE	canonical	3	31	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGACAAAAAGGAGAAGAAGA	NA	False	NA	-26	True	AAGAAA	-8	NA	7818490	7965618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_7818876_7824317_7824561_7963919
transcript_15997.known	chr10	+	4875	7	FSM	ENSG00000165632.9	ENST00000344293.6	4875	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	4.18993502999218	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGCTTTTCCATTTTCTT	7817279	True	NA	9	True	AATAAA	-20	NA	7818504	8016631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_7818876_7824317_7824561_7963919_7965743_7977240_7977324_8009077_8009331_8013730_8013838_8014636
transcript_16.known	ERCC-00039	+	724	1	FSM	ERCC-00039A	DQ883656	724	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00039_+_0_700
transcript_160.nnic	SIRV12002	+	254	2	Genic_Genomic	SIRV12002A	novel	11999	1	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAGAAA	-36	NA	0	11999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_SIRV12002_+_51_11795
transcript_16002.known	chr10	-	710	4	FSM	ENSG00000225383.8	ENST00000446372.3	710	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.88561808316413	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	-10794903	False	NA	2	True	AATAAA	-21	NA	10794929	10784436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_10784670_10786644_10786736_10792371_10792526_10794697
transcript_16003.known	chr10	-	781	4	FSM	ENSG00000225383.8	ENST00000667544.1	781	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	NA	False	NA	2	True	AATAAA	-21	NA	10794980	10784436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_10784670_10786644_10786756_10792371_10792526_10794697
transcript_16004.known	chr10	-	707	4	FSM	ENSG00000225383.8	ENST00000660024.1	707	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	NA	False	NA	2	True	AATAAA	-21	NA	10795047	10784436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_10784670_10786644_10786756_10792371_10792526_10794838
transcript_16005.nnic	chr10	-	538	3	NIC	ENSG00000225383.8	novel	710	4	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTGACCTGATTC	-10794885	True	NA	2	True	AATAAA	-21	NA	10794911	10784436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_10784670_10786644_10786736_10794697
transcript_16006.known	chr10	+	7982	14	FSM	ENSG00000048740.19	ENST00000542579.5	7982	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	22.5913006244732	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAAAAGTTCTCCGGAGT	11017578	True	NA	NA	False	AATAAA	-11	NA	11017929	11336667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_16009.nic	chr10	+	2481	14	NIC	ENSG00000048740.19	novel	7982	14	NA	NA	69	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_10	14.6076902823347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AATACAAAAAAAAAAAAAAG	11018007	False	NA	12	True	NA	NA	NA	11018034	11331277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_11018164_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_16010.known	chr10	+	8044	14	FSM	ENSG00000048740.19	ENST00000417956.6	8044	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	28.6064915875181	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTCCGGAGTGCATTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	11165029	11336675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314259_11321188_11321387_11325835_11325980_11328925_11329098_11330455
transcript_16011.known	chr10	+	1892	14	FSM	ENSG00000048740.19	ENST00000608830.5	1892	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.3088347016304	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGGGAAGTCAATGTGAAA	11164385	True	NA	NA	False	NA	NA	NA	11165139	11330639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11165318_11165485_11165683_11217424_11217508_11249152_11249202_11257737_11257873_11266597_11266678_11270665_11270825_11275056_11275121_11288417_11288553_11314138_11314271_11321206_11321387_11325835_11325980_11328925_11329098_11330455
transcript_16020.known	chr10	+	3375	4	FSM	ENSG00000148426.13	ENST00000277570.10	3375	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	4.49691252107735	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTTGTTTTTGCATTG	11822311	True	NA	6	True	AATAAA	-20	NA	11823355	11872277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_11823471_11851996_11852216_11866530_11866784_11869489
transcript_16027.nic	chr10	-	579	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-141	115037	-141	0	5prime_fragment	FALSE	canonical	3	191	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	-12042688	False	NA	0	True	NA	NA	NA	12042950	12035058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_12035442_12042754
transcript_16028.nic	chr10	-	510	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-141	115106	-141	-69	5prime_fragment	FALSE	canonical	3	191	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAGAGAGAAAGAAGCAAG	-12042688	False	NA	4	True	AAAAAG	-29	NA	12042950	12035127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_12035442_12042754
transcript_16029.known	chr10	-	640	2	FSM	ENSG00000151461.20	ENST00000460569.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGCAGTTGATTGTATT	-12042908	True	NA	0	True	NA	NA	NA	12043170	12035058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12035442_12042913
transcript_16030.nic	chr10	-	439	2	ISM	ENSG00000151461.20	ENST00000357604.10	5168	22	-141	115177	-141	-140	5prime_fragment	FALSE	canonical	3	191	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGAAGAAAAGGTGAAGGC	-12042688	False	NA	-26	True	AAAAAG	-25	NA	12042950	12035198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_12035442_12042754
transcript_16033.known	chr10	-	5168	22	FSM	ENSG00000151461.20	ENST00000357604.10	5168	22	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_17	17.6272825028526	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCGTGGTGTTGTTT	-12038825	True	NA	-7	True	AATAAA	-14	NA	12042809	11920021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_11921308_11929864_11929986_11931640_11931783_11936544_11936713_11942664_11942764_11943063_11943169_11948368_11948509_11952065_11952250_11955231_11955508_11956319_11956524_11959170_11959357_11964008_11964126_11967340_11967455_11979056_11979166_11997671_11997758_11999905_12000010_12001675_12001826_12004529_12004728_12014023_12014185_12028744_12029525_12035058_12035442_12042754
transcript_16034.known	chr10	+	5173	17	FSM	ENSG00000181192.12	ENST00000263035.9	5173	17	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_13	16.1535599791501	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGGACTCCTGGACTTCT	12063978	True	NA	8	True	AATAAA	-22	NA	12068953	12123221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072_12094272_12097683_12097997_12100177_12100263_12101041_12101182_12106245_12106397_12107908_12108016_12112899_12113065_12117672_12117756_12118748_12118919_12120181_12120268_12120786
transcript_1604.nnic	chr1	+	593	4	NNC	ENSG00000234546.5	novel	488	3	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	7.78888096369861	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACTTCTCCCCA	9182128	False	NA	NA	False	TATAAA	-20	NA	9182142	9185386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_9182317_9183632_9183808_9183953_9183988_9185176
transcript_16041.nic	chr10	+	1492	7	ISM	ENSG00000181192.12	ENST00000263035.9	5173	17	-24	28920	-24	0	5prime_fragment	FALSE	canonical	3	232	junction_2	8.76863095864394	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAAAAATTAAAATTACT	12063954	True	NA	-25	True	TATAAA	-18	NA	12068929	12094301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_12069188_12081471_12081628_12084539_12084752_12087534_12087730_12088985_12089256_12091512_12091685_12094072
transcript_1605.known	chr1	+	1114	4	FSM	ENSG00000234546.5	ENST00000664915.1	1114	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.73053390247253	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTGGTGGAATGGACTG	9182150	False	NA	13	True	AATAAA	-25	NA	9182164	9192094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9182317_9183632_9183808_9191039_9191125_9191392
transcript_16055.known	chr10	+	2495	12	FSM	ENSG00000065665.21	ENST00000298428.14	2495	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	12.4701295996235	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTTCTAAGATCATTTGT	12128299	True	NA	13	True	AATAAA	-17	NA	12129676	12165407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12164267
transcript_16057.known	chr10	+	2030	12	FSM	ENSG00000065665.21	ENST00000304267.12	2030	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	31.1429654580398	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAAGTGTCTGCTTCTTTC	12128323	True	NA	NA	False	AATAAA	-14	NA	12129700	12169956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12129795_12133240_12133309_12136104_12136171_12143116_12143196_12149594_12149727_12149851_12149962_12155777_12155932_12156906_12157068_12157907_12158106_12160929_12161122_12162212_12162290_12169257
transcript_16064.known	chr10	-	919	11	FSM	ENSG00000165609.13	ENST00000378937.7	919	11	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_8	537.465943107096	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTGGTGGTGGTATGGAA	-12195804	False	NA	-3	True	AATAAA	-12	NA	12195822	12167575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184493_12184533_12184888_12184957_12186228_12186333_12195769
transcript_1607.known	chr1	+	488	3	FSM	ENSG00000234546.5	ENST00000665148.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTCACTTCTCCCCA	9181869	True	NA	NA	False	TATAAA	-20	NA	9182213	9185386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9182317_9183632_9183808_9185176
transcript_16077.known	chr10	-	1201	10	FSM	ENSG00000165609.13	ENST00000537776.5	1201	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	434.896780715313	2206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTGGTGGTGGTATGGA	-12194320	True	NA	-4	True	AATAAA	-11	NA	12196144	12167576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12167812_12170716_12170771_12170899_12170913_12172768_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_16079.known	chr10	-	1126	10	FSM	ENSG00000165609.13	ENST00000378940.7	1126	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	434.693250720807	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGTGATTTCTTTGG	-12186802	True	NA	3	True	NA	NA	NA	12195869	12169721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12170157_12170716_12170771_12170899_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_1608.known	chr1	+	1025	3	FSM	ENSG00000234546.5	ENST00000412639.4	1034	3	0	9	0	0	multi-exon	FALSE	canonical	2	13	junction_2	4	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTCATTGGTGGAATG	9182149	False	NA	8	True	AATAAA	-20	NA	9182163	9192089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9182317_9183632_9183808_9191392
transcript_16102.known	chr10	+	1321	13	FSM	ENSG00000151465.14	ENST00000281141.9	1321	13	0	0	0	0	multi-exon	FALSE	canonical	3	2482	junction_5	174.677381191727	22934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCTTTTCTACCGAGTC	12173604	True	NA	33	True	AATAAA	-18	NA	12196187	12250589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12246148_12246278_12249580_12249719_12250310
transcript_16103.known	chr10	+	959	11	FSM	ENSG00000151465.14	ENST00000455773.7	959	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_10	801.046496777809	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTTAAGCTGGTAAAGTC	12195491	False	NA	NA	False	AATAGA	-2	NA	12196129	12249706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947_12230997_12235047_12235124_12237143_12237267_12238456_12238486_12249580
transcript_16104.known	chr10	-	1258	8	FSM	ENSG00000165609.13	ENST00000378927.7	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_3	106.797538762437	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCAGCTGTGTGGCCCTT	-12195804	False	NA	-27	True	AATAAA	-3	NA	12195822	12170231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_12170909_12172764_12172867_12173717_12173814_12177792_12177901_12179082_12179133_12184888_12184957_12186228_12186333_12195769
transcript_16105.known	chr10	+	646	8	FSM	ENSG00000151465.14	ENST00000429258.6	646	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	966.211706213752	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTATAGAATATGAGGT	12195326	True	NA	NA	False	NA	NA	NA	12195964	12230978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_12196024_12196129_12196320_12198704_12198777_12209966_12210025_12210289_12210323_12215739_12215836_12217360_12217468_12230947
transcript_16108.known	chr10	+	3488	16	FSM	ENSG00000123240.17	ENST00000378752.7	3488	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	71.3700839910455	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTCTTTTGTTTAAATTT	13096209	True	NA	6	True	ATTAAA	-2	NA	13100172	13138291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13108137_13108290_13108961_13109016_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118905_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_1611.known	chr1	+	3865	7	FSM	ENSG00000171612.7	ENST00000302692.7	3865	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	25.844083784624	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATAATTTTAGTTTTCTGC	9536621	True	NA	NA	False	AATAAA	-16	NA	9539464	9585173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9539748_9553625_9553806_9567283_9567362_9570257_9570359_9573345_9573413_9579953_9580235_9582298
transcript_16113.known	chr10	+	3479	15	FSM	ENSG00000123240.17	ENST00000378747.8	3479	15	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_2	55.6627967207498	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096199	True	NA	23	True	ATTAAA	-19	NA	13100162	13138308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13108137_13108290_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_16116.known	chr10	+	3321	14	FSM	ENSG00000123240.17	ENST00000378757.6	3321	14	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	27.0968021432517	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAGAATCTCTCC	13096205	True	NA	23	True	ATTAAA	-19	NA	13100168	13138308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13109111_13109289_13110273_13110477_13112452_13112636_13116266_13116341_13118887_13119041_13122384_13122488_13123994_13124111_13125417_13125568_13125945_13126040_13127744_13127904_13132066_13132198_13133501_13133582_13136744
transcript_16132.known	chr10	+	511	3	FSM	ENSG00000123240.17	ENST00000487935.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAATTAAAAAAAAAAA	13096195	True	NA	NA	False	NA	NA	NA	13100158	13109662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13100303_13109111_13109289_13109472
transcript_16133.known	chr10	+	3157	20	FSM	ENSG00000065328.17	ENST00000484800.6	3157	20	0	0	0	0	multi-exon	TRUE	canonical	3	67	junction_4	52.7726530372243	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTCAGTTTTCTCATCTG	13154117	True	NA	-98	True	NA	NA	NA	13161578	13209736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13161607_13164127_13164210_13170921_13171264_13172375_13172481_13172624_13172766_13175509_13175682_13180441_13180608_13182932_13183101_13186163_13186281_13188880_13189081_13191298_13191400_13192254_13192366_13192450_13192569_13195040_13195270_13197622_13197768_13198688_13198808_13201420_13201535_13204218_13204365_13209090_13209134_13209226
transcript_16143.known	chr10	+	469	3	FSM	ENSG00000065328.17	ENST00000479669.5	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTGGTAAGAAGACTGTC	13154117	True	NA	NA	False	ATTAAA	-32	NA	13161578	13172474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13161607_13170921_13171264_13172375
transcript_16144.known	chr10	-	870	5	FSM	ENSG00000165623.10	ENST00000378681.8	870	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	3.35410196624968	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTATTATCTTCTCAA	-13234214	True	NA	-4	True	AATAAA	-15	NA	13234374	13221765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13222201_13229610_13229710_13233537_13233634_13233734_13233801_13234200
transcript_16145.nnic	chr10	-	814	4	NIC	ENSG00000165623.10	novel	870	5	NA	NA	-41	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	7.03957069398096	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGTATTATCTTCTCA	-13234255	True	NA	-5	True	AATAAA	-14	NA	13234415	13221766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_13222201_13229610_13229710_13233734_13233801_13234200
transcript_16146.nnic	chr10	-	690	3	NIC	ENSG00000165623.10	novel	763	4	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGTATTATCTTCTCA	-13234197	True	NA	-5	True	AATAAA	-14	NA	13234357	13221766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_13222201_13229610_13229710_13234200
transcript_16148.known	chr10	-	1541	9	FSM	ENSG00000107537.14	ENST00000263038.9	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_4	59.1164105811576	960	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGGCTTTCTCCTGTGAT	-13295661	True	NA	-7	True	AATAAA	-20	NA	13300064	13277798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13278355_13280975_13281111_13283689_13283840_13288359_13288542_13291830_13291913_13294427_13294597_13295495_13295607_13298186_13298246_13299967
transcript_1615.known	chr1	+	515	3	FSM	ENSG00000171608.17	ENST00000484851.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTGAATTTTTATAATT	9688103	False	NA	NA	False	ATTAAA	-17	NA	9688175	9691946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9688314_9691466_9691572_9691674
transcript_16153.known	chr10	-	3265	9	FSM	ENSG00000086475.15	ENST00000327347.10	3265	9	0	0	0	0	multi-exon	FALSE	canonical	3	3649	junction_8	416.541245706833	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACTGTTGAGCTTTTTTT	-13348196	False	NA	-17	True	AATAAA	-29	NA	13348293	13317427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_1616.nnic	chr1	-	588	2	NIC	ENSG00000231789.3	novel	978	3	NA	NA	-34	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	0	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTAATGGTTCATCA	-9686071	True	NA	2	True	AATAAA	-33	NA	9687607	9672404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_9672720_9687334
transcript_1617.known	chr1	-	939	3	FSM	ENSG00000231789.3	ENST00000415330.3	978	3	18	21	18	-21	multi-exon	FALSE	canonical	3	7	junction_1	35	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGGCATTTCTCATCCTA	-9686019	True	NA	-19	True	AATAAA	-12	NA	9687555	9672425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9672720_9680711_9681136_9687334
transcript_16174.known	chr10	-	2988	8	FSM	ENSG00000086475.15	ENST00000545675.5	2988	8	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_7	1549.1114240369	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGATAAACCTACTGTT	-13348201	False	NA	-28	True	AATAAA	-18	NA	13348298	13317438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13319357_13322834_13323048_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13347999
transcript_16176.known	chr10	-	2387	8	FSM	ENSG00000086475.15	ENST00000378614.8	2387	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1538.69507395463	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTTGTATAATCAGAT	-13348183	False	NA	-18	True	AATAAA	-17	NA	13348280	13318079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_13319357_13328350_13328451_13329697_13329789_13333816_13333972_13336242_13336351_13338704_13338809_13344757_13345029_13347999
transcript_1618.known	chr1	-	1206	5	FSM	ENSG00000178585.15	ENST00000400904.7	1206	5	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_4	22.6550215184184	277	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGGTTTGTGTTTGA	-9905818	True	NA	-19	True	NA	NA	NA	9910336	9850108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9850777_9871186_9871278_9871968_9872089_9877904_9877990_9910094
transcript_16193.nnic	chr10	-	569	5	NNC	ENSG00000151474.23	novel	172	2	NA	NA	-51	-13026	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2.12132034355964	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGTCTAAGAAATTTTGT	-13891735	False	NA	NA	False	NA	NA	NA	13891780	13795954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_13796113_13796495_13796589_13810813_13810909_13858846_13858913_13891623
transcript_16212.known	chr10	+	1670	10	FSM	ENSG00000165630.14	ENST00000378572.8	1670	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_6	14.0317101198995	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGGTATAACTCAAATG	13583784	True	NA	3	True	AATAGA	-19	NA	13586964	13630859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13613740_13613882_13614014_13614087_13616397_13616554_13630259
transcript_16217.nnic	chr10	+	1430	9	NIC	ENSG00000165630.14	novel	1670	10	NA	NA	-12	-137	combination_of_known_splicesites	FALSE	canonical	3	6	junction_6	36.4991438255749	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTTTTATGTAATA	13583746	True	NA	11	True	AGTAAA	-15	NA	13586926	13630722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_13587153_13597457_13597536_13600243_13600349_13605630_13605745_13610038_13610186_13611614_13611684_13614014_13614087_13616397_13616554_13630259
transcript_16226.known	chr10	-	2633	4	FSM	ENSG00000065809.14	ENST00000468747.5	2633	4	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	13.2748718344933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACTTAAGAAAGCATTTC	-14601408	True	NA	NA	False	NA	NA	NA	14604389	14519158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14521307_14521868_14522020_14530331_14530516_14604239
transcript_16227.known	chr10	-	425	2	FSM	ENSG00000065809.14	ENST00000491458.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCCACTGGACGCTT	-14601289	True	NA	-14	True	AATAAA	-18	NA	14604270	14602456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14602851_14604239
transcript_16231.known	chr10	-	1390	4	FSM	ENSG00000185267.10	ENST00000465530.2	1390	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTTAATGCTATTTTA	-14837890	True	NA	NA	False	ATTAAA	-38	NA	14838037	14819244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14820159_14825478_14825621_14828144_14828273_14837831
transcript_16235.known	chr10	+	1762	14	FSM	ENSG00000187522.16	ENST00000378372.8	1762	14	0	0	0	0	multi-exon	TRUE	canonical	3	339	junction_3	61.935259193459	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGCAACCCTTTGTTTT	14831848	True	NA	18	True	ATTAAA	-18	NA	14838305	14871741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849720_14849812_14851218_14851324_14852369_14852532_14854124_14854281_14855840_14855944_14867082_14867296_14867735_14867910_14870596_14870668_14871527
transcript_16236.known	chr10	+	4660	5	FSM	ENSG00000284024.4	ENST00000640019.3	4660	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	209.974998511728	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGGGTCAGTCCACTAC	14831848	True	NA	13	True	AATAAA	-18	NA	14838305	14846999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14842133_14842847_14843370
transcript_16237.known	chr10	+	1689	4	FSM	ENSG00000284024.4	ENST00000645667.1	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	233.128004895737	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTCATATTATTTG	14831844	True	NA	17	True	ATTAAA	-14	NA	14838301	14844737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14843370
transcript_16238.known	chr10	+	578	6	FSM	ENSG00000187522.16	ENST00000441647.1	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	183.389639838242	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCACTTGTCATTTTCTTCT	14838301	False	NA	8	True	AATAAA	-12	NA	14838436	14849668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14838460_14839904_14839986_14840074_14840158_14848608_14848658_14848789_14848896_14849432
transcript_16239.known	chr10	-	999	1	FSM	ENSG00000272853.1	ENST00000609399.1	999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTCTAGCCGTCTTAAA	-14878566	True	NA	NA	False	ATTAAA	-33	NA	14878686	14877687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14877700_14878700
transcript_1624.nic	chr1	-	1071	8	NIC	ENSG00000162441.12	novel	652	5	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	48.0832611206852	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-9941221	True	NA	-3	True	AATAAA	-23	NA	9943392	9922112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_16242.known	chr10	-	2463	15	FSM	ENSG00000152457.18	ENST00000378258.5	2463	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	9.45558899621309	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-14953699	True	NA	NA	False	NA	NA	NA	14954072	14908170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14947524_14947610_14949035_14949088_14953901
transcript_16244.known	chr10	-	5960	14	FSM	ENSG00000152457.18	ENST00000378278.7	5960	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_12	5.10829468181046	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGTTTACTGAAAATAGTC	-14953723	True	NA	NA	False	AATAAA	-16	NA	14954096	14904612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14936537_14936594_14939809_14939870_14945104_14945190_14949035_14949088_14953901
transcript_16249.known	chr10	-	2246	12	FSM	ENSG00000152457.18	ENST00000378249.5	2246	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_11	9.94364284645478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGCCAGGCATGGTGGT	-14953675	True	NA	NA	False	NA	NA	NA	14954048	14908170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_14909331_14919737_14919833_14922980_14923070_14926842_14926898_14928015_14928153_14932853_14932956_14934379_14934521_14934702_14934776_14935462_14935565_14939809_14939870_14945104_14945190_14953901
transcript_16253.known	chr10	+	1292	6	FSM	ENSG00000152455.16	ENST00000378325.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.0846085027484	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTTCAGCTTCATTTCG	14872863	True	NA	9	True	ATTAAA	-9	NA	14878862	14903085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_16254.known	chr10	+	3059	6	FSM	ENSG00000152455.16	ENST00000354919.11	3059	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	65.6676480468122	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	14872866	True	NA	NA	False	NA	NA	NA	14878865	14904315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878920_14881499_14881646_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_16256.known	chr10	+	719	6	FSM	ENSG00000152455.16	ENST00000433779.5	719	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.1525689571372	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTCAGAACAGTATGTAAA	14872848	True	NA	NA	False	AAAAAG	-2	NA	14878847	14902456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878961_14881499_14881646_14896845_14896978_14899538_14899686_14901132_14901263_14902405
transcript_16260.known	chr10	+	2959	5	FSM	ENSG00000152455.16	ENST00000378331.5	2959	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	38.3210125127194	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	14872820	True	NA	NA	False	NA	NA	NA	14878819	14904315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14878920_14896845_14897518_14899538_14899686_14901132_14901263_14902405
transcript_1627.known	chr1	-	4989	8	FSM	ENSG00000162441.12	ENST00000377223.6	4989	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	24.4682217897219	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCCACGTTTTTCTT	-9941220	True	NA	-1	True	AATAAA	-35	NA	9943391	9926292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943248
transcript_16276.nic	chr10	+	652	2	ISM	ENSG00000152455.16	ENST00000378331.5	2959	5	-66	6984	-66	-179	5prime_fragment	FALSE	canonical	3	125	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTACTCCCATCTATGA	NA	False	NA	NA	False	AATAAA	-22	NA	14878753	14897331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_14878920_14896845
transcript_16277.nic	chr10	+	1049	2	ISM	ENSG00000152455.16	ENST00000378331.5	2959	5	-66	6587	-66	218	5prime_fragment	FALSE	canonical	3	125	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATATAGTCATCTTTCAA	NA	False	NA	NA	False	AATAAA	-39	NA	14878753	14897728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_14878920_14896845
transcript_16278.known	chr10	+	682	3	FSM	ENSG00000197889.10	ENST00000407572.6	682	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCCATTTTATTT	14959366	True	NA	NA	False	ATTAAA	-22	NA	14959387	14972857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14959558_14966439_14966607_14972512
transcript_16280.known	chr10	+	516	3	FSM	ENSG00000197889.10	ENST00000496225.2	516	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATCATTTCCTTCTACAT	14959488	False	NA	NA	False	NA	NA	NA	14959509	14972681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_14959558_14970247_14970547_14972512
transcript_16287.nnic	chr10	-	1510	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6731759484026	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086454	True	NA	-3	True	ATTAAA	-21	NA	15088819	15075474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075807_15077709_15078604_15078690_15078754_15078922_15079041_15088716
transcript_16288.nnic	chr10	-	1514	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	18.6731759484026	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086454	True	NA	-3	True	ATTAAA	-21	NA	15088819	15075474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075820_15077718_15078604_15078690_15078754_15078922_15079041_15088716
transcript_16289.nnic	chr10	-	1514	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-43	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.6731759484026	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086454	True	NA	-3	True	ATTAAA	-21	NA	15088819	15075474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075897_15077795_15078604_15078690_15078754_15078922_15079041_15088716
transcript_16291.nnic	chr10	-	1512	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-43	-6	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	18.6731759484026	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTACACAAATCTCTCTG	-15086454	True	NA	-9	True	ATTAAA	-15	NA	15088819	15075480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15075935_15077829_15078604_15078690_15078754_15078922_15079041_15088716
transcript_16292.nnic	chr10	-	1078	5	NNC	ENSG00000176244.7	novel	3370	4	NA	NA	-43	-1029	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	18.6731759484026	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAAGTCTGTCCATAGCA	-15086454	True	NA	NA	False	AAAACA	-30	NA	15088819	15076503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_15076549_15077854_15078604_15078690_15078754_15078922_15079041_15088716
transcript_16296.known	chr10	-	3370	4	FSM	ENSG00000176244.7	ENST00000356189.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	6.68331255192114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAATCTCTCTGTATTAT	-15086411	True	NA	-3	True	ATTAAA	-21	NA	15088776	15075474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15078604_15078690_15078754_15078922_15079041_15088716
transcript_16301.known	chr10	-	2457	13	FSM	ENSG00000152465.18	ENST00000378150.1	2457	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_11	23.3670886790232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGCTTGAACCTGAGAGG	-15167316	True	NA	NA	False	NA	NA	NA	15168628	15108293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15140986_15141030_15141421_15141558_15168502
transcript_16304.nic	chr10	-	1904	12	NIC	ENSG00000152465.18	novel	5003	12	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	18.0810845867915	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTTAGGACTTTACTTCC	-15167402	True	NA	16	True	AGTAAA	-33	NA	15168714	15106372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_15106699_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_16305.known	chr10	-	5003	12	FSM	ENSG00000152465.18	ENST00000378165.9	5003	12	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_1	13.2284441843019	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATAGTTTCTTGTAGATT	-15167381	True	NA	NA	False	ATTAAA	-45	NA	15168693	15105769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15109216_15109701_15109840_15112795_15112964_15119342_15119514_15128349_15128459_15130141_15130313_15132816_15132934_15133052_15133145_15133244_15133364_15135273_15135419_15141421_15141558_15168502
transcript_16313.known	chr10	+	1296	3	FSM	ENSG00000152464.15	ENST00000378203.5	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGATTCATAGGGTCCTG	15097132	False	NA	3	True	AATAAA	-15	NA	15097179	15104251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097410_15102217_15102337_15103304
transcript_16314.known	chr10	+	1484	3	FSM	ENSG00000152464.15	ENST00000378197.5	1484	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	41	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATAGGGTCCTGTTTGGT	15095250	True	NA	9	True	AATAAA	-21	NA	15097354	15104257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097767_15102217_15102337_15103304
transcript_16317.known	chr10	+	1030	2	FSM	ENSG00000152464.15	ENST00000378202.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATAGGGTCCTGTTTG	15096673	False	NA	7	True	AATAAA	-19	NA	15097330	15104255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097410_15103304
transcript_16318.known	chr10	+	863	2	FSM	ENSG00000152464.15	ENST00000441850.1	863	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCGTCATTGGCTTAAAAT	15095315	False	NA	NA	False	NA	NA	NA	15097419	15103820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_15097767_15103304
transcript_16320.nic	chr10	-	270	2	ISM	ENSG00000152465.18	ENST00000378150.1	2457	13	-86	33206	-21	-8683	5prime_fragment	FALSE	canonical	3	64	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAACCAAATTCCGGAGG	-15167402	True	NA	NA	False	AAAAAG	-28	NA	15168714	15141499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_15141558_15168502
transcript_16321.known	chr10	-	1714	2	FSM	ENSG00000176236.6	ENST00000624760.1	1714	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTAGTGCTTGTGTTT	-15097287	False	32	NA	False	AATAAA	-19	NA	15097319	15095384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15096866_15097086
transcript_16326.known	chr10	-	2364	15	FSM	ENSG00000148481.14	ENST00000277632.8	2364	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_10	12.5063249304225	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTACCCTTGCATTTTTTA	-15859820	True	NA	-5	True	AATAAA	-16	NA	15860507	15778173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15838227_15838280_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_16328.known	chr10	-	2307	14	FSM	ENSG00000148481.14	ENST00000477891.1	2307	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	21.1500695929584	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCATTTTTTACATT	-15859811	True	NA	-1	True	AATAAA	-20	NA	15860498	15778169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_15779142_15782154_15782227_15786560_15786649_15789246_15789320_15796099_15796173_15816834_15816916_15821655_15821727_15833629_15833710_15834542_15834617_15837203_15837319_15841425_15841600_15843211_15843273_15847863_15847944_15860205
transcript_16347.known	chr10	+	3777	6	FSM	ENSG00000165983.15	ENST00000378000.5	3777	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7980768341691	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAATCTAAATGTATT	16436262	True	NA	2	True	AATAAA	-15	NA	16436983	16513737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_16437048_16437356_16437491_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_16351.nnic	chr10	+	1679	5	NIC	ENSG00000165983.15	novel	3777	6	NA	NA	-7	-1666	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	18.6681547025945	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAATGTTTGCCTTATGT	16436214	True	NA	NA	False	NA	NA	NA	16436935	16512071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_16437048_16437356_16437491_16486351_16486618_16505019_16505161_16511045
transcript_16352.known	chr10	+	3625	5	FSM	ENSG00000165983.15	ENST00000535784.7	3625	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	12.1346610995116	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	16436288	True	NA	10	True	AATAAA	-23	NA	16437009	16513745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_16437048_16484336_16484817_16486351_16486618_16505019_16505161_16511045
transcript_16355.known	chr10	+	3212	4	FSM	ENSG00000165983.15	ENST00000423462.6	3212	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	16.2138486760204	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAAATGTATTCAGTTGAC	16436221	True	NA	10	True	AATAAA	-23	NA	16436942	16513745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_16437048_16486351_16486618_16505019_16505161_16511045
transcript_16360.nnic	chr10	+	623	3	NNC	ENSG00000165983.15	novel	3777	6	NA	NA	-7	-46329	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTGTGGTTGTACCT	16436214	True	NA	NA	False	AATAAA	-25	NA	16436935	16440463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_16437048_16437356_16437495_16440090
transcript_16365.known	chr10	-	955	8	FSM	ENSG00000148484.18	ENST00000377911.1	955	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_7	210.230097458834	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATGCTGCGTGTGAGGC	-16807311	True	NA	-26	True	AATAAA	-1	NA	16817463	16593312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16817314
transcript_16368.known	chr10	-	3730	9	FSM	ENSG00000148484.18	ENST00000345264.10	3730	9	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_7	42.4645072383985	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTATGTCATGGTATATT	-16807272	True	NA	0	True	ATTAAA	-24	NA	16817424	16590610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_16593497_16695022_16695156_16752538_16752654_16752917_16753001_16754870_16754990_16764389_16764511_16782033_16782085_16816972_16817085_16817314
transcript_16370.known	chr10	-	8230	12	FSM	ENSG00000107614.22	ENST00000354631.7	8230	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_10	58.1281002016912	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGACAAAAGGTTCAGG	-17199757	True	NA	NA	False	AATAAA	-10	NA	17201672	17142253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17169309_17169540_17174550_17174661_17201570
transcript_16372.known	chr10	-	12918	11	FSM	ENSG00000107614.22	ENST00000377799.8	12918	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_7	24.4501533737521	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCATGGTCAAGGACTTCG	-17199757	True	NA	NA	False	AATAAA	-20	NA	17201672	17137335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17161482_17161549_17162165_17162238_17168840_17168918_17174550_17174661_17201570
transcript_16392.nic	chr10	-	1200	9	NIC	ENSG00000107614.22	novel	12918	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_6	51.3438165702551	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGGATTTTATTAAA	-17199757	True	NA	-45	True	ACTAAA	-24	NA	17201672	17148915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_17149141_17153506_17153637_17154676_17154735_17157440_17157785_17159145_17159230_17160304_17160375_17168840_17168918_17174550_17174661_17201570
transcript_16401.known	chr10	-	711	3	FSM	ENSG00000107614.22	ENST00000479046.1	711	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	82.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAATTTTTCTAGAATG	NA	False	NA	NA	False	AATAAA	-6	NA	17202054	17171907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17172025_17174550_17174661_17201570
transcript_16403.nnic	chr10	-	579	3	NNC	ENSG00000107614.22	novel	12918	11	NA	NA	37	-817	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	76	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTTATATTTATCTATA	NA	False	NA	NA	False	ATTAAA	-40	NA	17201814	17172724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_17172950_17174550_17174661_17201570
transcript_16404.nic	chr10	-	1064	2	ISM	ENSG00000107614.22	ENST00000479046.1	711	3	301	1872	-81	-1872	5prime_fragment	FALSE	canonical	3	169	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGAAATTGTGTTGT	-17199838	True	NA	NA	False	NA	NA	NA	17201753	17173779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_17174661_17201570
transcript_16406.known	chr10	+	1868	9	FSM	ENSG00000026025.16	ENST00000224237.9	1868	9	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	29.7108460835433	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	17223273	True	NA	16	True	AATAAA	-16	NA	17229277	17237593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17229986_17230649_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_16407.nic	chr10	+	1350	8	ISM	ENSG00000026025.16	ENST00000224237.9	1868	9	1182	0	-149	0	3prime_fragment	FALSE	canonical	3	148	junction_1	24.6328136883321	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTGTTATTTATTG	17230441	False	NA	16	True	AATAAA	-16	NA	17230459	17237593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_17230711_17233586_17233683_17233769_17233932_17234692_17234819_17235168_17235390_17235845_17235890_17236293_17236380_17237229
transcript_16408.known	chr10	-	918	3	FSM	ENSG00000229124.8	ENST00000605833.2	1901	3	33	950	33	-864	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTTAGAAATTCCAACT	-17229959	True	NA	NA	False	NA	NA	NA	17229985	17215195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17215365_17216166_17216275_17229344
transcript_1641.known	chr1	+	1094	5	FSM	ENSG00000173614.14	ENST00000403197.5	1094	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.11737237261468	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCCTGCAGTGGTCTCT	9942939	True	NA	NA	False	AATAAA	-17	NA	9943427	9981766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9981255
transcript_16418.nnic	chr10	-	1074	3	NNC	ENSG00000148488.17	novel	6994	8	NA	NA	89	-66320	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	11	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTTGTGTTGTTTGTTG	-17453926	False	NA	-1	True	ATTAAA	-19	NA	17454107	17386665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_17387101_17390530_17390621_17453558
transcript_1642.known	chr1	+	3734	5	FSM	ENSG00000173614.14	ENST00000377205.6	3734	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.12310562561766	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTAGTCTGATGGA	9942986	True	NA	NA	False	AATAAA	-14	NA	9943474	9985498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943516_9972017_9972189_9975591_9975776_9981030_9981171_9982300
transcript_16421.known	chr10	+	557	3	FSM	ENSG00000204832.10	ENST00000457649.6	557	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGTGTCCATATTAGCTA	17386919	True	NA	NA	False	ATTAAA	-19	NA	17386935	17408286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17387076_17399104_17399203_17407967
transcript_16422.known	chr10	+	404	3	FSM	ENSG00000204832.10	ENST00000451225.2	404	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGTGTCCATATTAGCTA	17386977	True	NA	NA	False	ATTAAA	-19	NA	17386993	17408286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17387076_17399104_17399203_17408062
transcript_16423.known	chr10	-	2234	7	FSM	ENSG00000165996.14	ENST00000361271.8	2234	7	0	0	0	0	multi-exon	TRUE	canonical	3	186	junction_1	19.7033556081755	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTACTTTCATAACTGCCTT	-17614179	True	NA	NA	False	AATAAA	-39	NA	17617374	17589031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17590447_17594204_17594384_17599289_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_16433.known	chr10	-	717	5	FSM	ENSG00000165996.14	ENST00000466335.1	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	14.7711712467224	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGTGAGACAAATTGTG	-17617224	False	NA	-4	True	AATAAA	-15	NA	17617235	17599073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_17599412_17603559_17603649_17603725_17603745_17603929_17604048_17617082
transcript_16438.known	chr10	+	3856	14	FSM	ENSG00000136738.15	ENST00000377524.8	3856	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	15.9874210908481	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTACTGTGTTAGTTTAT	17641533	True	NA	NA	False	TATAAA	-26	NA	17644150	17716824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221_17693313_17695048_17695242_17696774_17696870_17700190_17700280_17704430_17704519_17704969_17705025_17705587_17705742_17708775_17708952_17714542
transcript_16441.nic	chr10	+	729	6	ISM	ENSG00000136738.15	ENST00000377524.8	3856	14	-36	23543	-36	0	5prime_fragment	FALSE	canonical	3	179	junction_3	10.2293694820355	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AACAAAAAAGAAGAAGAAGA	NA	False	NA	NA	False	NA	NA	NA	17644114	17693281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_17644380_17660463_17660549_17684674_17684751_17684831_17684928_17688026_17688174_17693221
transcript_16445.nic	chr10	+	776	3	ISM	ENSG00000165995.23	ENST00000352115.10	1911	14	-81	137319	-81	82758	5prime_fragment	TRUE	canonical	2	10	junction_2	6	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGACTTCAAGCTATT	18140580	True	NA	NA	False	AGTAAA	-31	NA	18140655	18402405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_18140857_18150882_18150976_18401923
transcript_16448.known	chr10	-	2166	11	FSM	ENSG00000241058.4	ENST00000377304.7	2166	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_6	10.6094297678999	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTTATGAAAAGTTGTT	-18649507	True	NA	-10	True	AATAAA	-15	NA	18651587	18545560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18546146_18548111_18548238_18551822_18551972_18585948_18586094_18596207_18596328_18609844_18609927_18614459_18614614_18616183_18616294_18642475_18642556_18648489_18648646_18651128
transcript_16455.known	chr10	-	553	3	FSM	ENSG00000241058.4	ENST00000607346.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTCATCCATCTTTTCA	-18659106	True	NA	NA	False	NA	NA	NA	18659285	18653283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18653460_18654852_18655176_18659231
transcript_16457.known	chr10	-	524	2	FSM	ENSG00000241058.4	ENST00000444660.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTCTTGGACTCCTGAC	-18659088	True	NA	NA	False	NA	NA	NA	18659267	18654687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18655176_18659231
transcript_16458.known	chr10	-	392	3	FSM	ENSG00000241058.4	ENST00000456217.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACAAAACACCGT	-18659088	True	NA	NA	False	NA	NA	NA	18659267	18651265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_18651471_18655024_18655176_18659231
transcript_16459.known	chr10	+	1761	12	FSM	ENSG00000204740.11	ENST00000377265.3	1761	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.28564869306645	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTTCTTGTTTTTCTTTG	19489028	True	NA	NA	False	AATAAA	-15	NA	19489093	19734476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_19489174_19491516_19491646_19498484_19498647_19531193_19531352_19567501_19567704_19595193_19595458_19607776_19607903_19615856_19615924_19692281_19692362_19692457_19692555_19730705_19730782_19734156
transcript_16461.nic	chr10	+	1255	3	ISM	ENSG00000204740.11	ENST00000377265.3	1761	12	-74	235020	-74	-31846	5prime_fragment	FALSE	canonical	1	1	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCAGCCTATGCAGC	NA	False	NA	NA	False	AATAGA	-11	NA	19489019	19499456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_19489174_19491516_19491646_19498484
transcript_16462.nic	chr10	+	508	3	ISM	ENSG00000204740.11	ENST00000377265.3	1761	12	-74	235767	-74	-32593	5prime_fragment	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTTCAGTGTGCA	NA	False	NA	NA	False	AAGAAA	-32	NA	19489019	19498709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_19489174_19491516_19491646_19498484
transcript_16463.known	chr10	+	12275	14	FSM	ENSG00000120594.17	ENST00000377252.5	12275	14	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_13	24.5687057407416	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGAATTGTCTTTATG	19816205	True	NA	27	True	ATTAAA	-41	NA	19816431	20289856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_19817192_20001774_20001987_20046868_20047016_20068169_20068240_20143294_20143418_20147783_20147903_20164467_20164568_20176998_20177095_20177327_20177410_20211668_20211730_20217425_20217577_20219063_20219103_20245344_20245506_20279702
transcript_16464.nnic	chr10	-	807	3	NNC	ENSG00000285852.1	novel	2349	2	NA	NA	-1408	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAACAGCTAACATAACTC	-19817653	True	NA	1	True	AATAAA	-18	NA	19817686	19812371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_19812844_19814401_19814467_19817416
transcript_16471.nnic	chr10	+	244	2	Antisense	novelGene_ENSG00000078114.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGCTACAATCCTTTGAT	NA	False	NA	NA	False	AATAAA	-23	NA	20953289	20953641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_20953425_20953532
transcript_16473.nnic	chr10	-	587	2	NNC	ENSG00000078114.19	novel	6789	9	NA	NA	-132	-88920	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAATTATCTAAATTAA	-21293125	False	NA	NA	False	AAAAAG	-6	NA	21293143	21260466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_21260740_21292829
transcript_16475.nnic	chr10	+	650	2	Antisense	novelGene_ENSG00000204682.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTCTGGTCGTTCCTC	21494138	True	NA	NA	False	AATAAA	-24	NA	21494173	21495535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_21494384_21495095
transcript_16495.known	chr10	+	573	6	FSM	ENSG00000078403.17	ENST00000651097.1	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	23.4606052777843	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGAATTTCTCTTGGATT	21523984	True	NA	NA	False	NA	NA	NA	21524645	21614924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330_21595441_21612347_21612452_21614830
transcript_16504.nic	chr10	+	1914	5	ISM	ENSG00000078403.17	ENST00000377072.8	5067	24	-15	146985	-15	1063	5prime_fragment	FALSE	canonical	3	25	junction_1	25.9374246986859	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAATGTTTGAA	21534194	False	NA	NA	False	AGTAAA	-9	NA	21534216	21596645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_21534521_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_16506.nic	chr10	+	1917	5	ISM	ENSG00000078403.17	ENST00000650772.1	564	6	-252	15806	-44	1063	5prime_fragment	FALSE	canonical	3	15	junction_1	30.2324329156619	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAATGTTTGAA	21534165	True	NA	NA	False	AGTAAA	-9	NA	21534187	21596645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_21534495_21534644_21534805_21538832_21538913_21586293_21586349_21595330
transcript_16507.nic	chr10	+	1659	4	ISM	ENSG00000078403.17	ENST00000651097.1	573	6	-79	18279	-79	1063	5prime_fragment	FALSE	canonical	3	25	junction_1	29.2726645334669	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATTAAAATGTTTGAA	21524534	False	NA	NA	False	AGTAAA	-9	NA	21524566	21596645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_21524776_21538832_21538913_21586293_21586349_21595330
transcript_16508.nic	chr10	+	972	4	NIC	ENSG00000078403.17	novel	381	4	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	26.6958174002346	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	21524551	False	NA	8	True	AATAAA	-20	NA	21524583	21557182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_21524776_21534644_21534805_21538832_21538913_21556642
transcript_16510.known	chr10	+	1069	4	FSM	ENSG00000078403.17	ENST00000377100.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	24.3629956194955	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGCCTACTGTGTTGTT	21533681	True	NA	8	True	AATAAA	-20	NA	21534231	21557182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534521_21534644_21534805_21538832_21538913_21556642
transcript_16512.known	chr10	+	785	4	FSM	ENSG00000078403.17	ENST00000652497.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	27.3292679903595	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTCACTTCTTCAAATG	21534262	False	NA	-6	True	AATAAA	-6	NA	21534475	21557168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_21534495_21534644_21534805_21538832_21538913_21556642
transcript_16518.known	chr10	-	6601	4	FSM	ENSG00000180592.17	ENST00000449193.7	6601	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTCCATACATTTCTAC	-21525635	False	NA	-5	True	ATTAAA	-18	NA	21525682	21513474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_21519659_21521388_21521481_21523682_21523872_21525546
transcript_16519.nic	chr10	-	692	2	ISM	ENSG00000180592.17	ENST00000449193.7	6601	4	-278	10119	-278	-4086	5prime_fragment	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTTCTGGATATTTGT	-21525913	False	NA	NA	False	AATAAA	-26	NA	21525960	21523593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_21523872_21525546
transcript_16520.known	chr10	-	2100	12	FSM	ENSG00000136770.11	ENST00000376980.8	2100	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	10.0165152878831	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-22002515	True	NA	-12	True	AATAAA	-15	NA	22003730	21756547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21882281_21882440_21904521_21904613_21918778_21918873_21919831_21919930_21920797_21920964_21928505_21928553_21929039_21929142_22003212
transcript_16523.nnic	chr10	-	1123	5	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	53419	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	58.0086200490927	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	NA	False	NA	-12	True	AATAAA	-15	NA	21807487	21756547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21807190
transcript_16524.nnic	chr10	-	1006	5	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	-710	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	60.9974384708079	124	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTGCTATACTGTTTA	-21861604	True	NA	-12	True	AATAAA	-15	NA	21861616	21756547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_21756756_21759169_21759619_21766260_21766310_21805979_21806100_21861436
transcript_16525.nnic	chr10	-	531	3	NNC	ENSG00000136770.11	novel	2100	12	NA	NA	53513	-44268	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTATAACTTTTCTTC	NA	False	NA	NA	False	AATAAA	-37	NA	21807393	21803776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_21803985_21805979_21806100_21807190
transcript_16526.known	chr10	+	3540	10	FSM	ENSG00000168283.14	ENST00000376663.8	3540	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	3.55902608401044	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGGTGAATTTAACTCAT	22321029	False	NA	5	True	AGTAAA	-20	NA	22321098	22331484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22321697_22326430_22326562_22326889_22326987_22327594_22327651_22327741_22327793_22327949_22328059_22328133_22328180_22328599_22328699_22329047_22329129_22329212
transcript_16527.known	chr10	+	926	8	FSM	ENSG00000148444.16	ENST00000376836.8	926	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	4.29997626951212	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGATATTTTGTTTG	22316318	True	NA	7	True	AATAAA	-22	NA	22316387	22320306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318652_22318714_22318805_22318863_22318958_22319019_22319938
transcript_16530.known	chr10	+	757	6	FSM	ENSG00000148444.16	ENST00000444869.5	757	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	13.9942845476287	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGTTGTTTTCCACAAAG	22316350	True	NA	-12	True	AATAAA	-3	NA	22316419	22320287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_22316557_22317883_22317996_22318104_22318169_22318271_22318307_22318958_22319019_22319938
transcript_16534.known	chr10	-	3820	10	FSM	ENSG00000150867.14	ENST00000376573.9	3820	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	6.36735501417529	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTAGTTTCTAGAGCC	-22709583	True	NA	-16	True	AAGAAA	-17	NA	22714578	22534853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_22537282_22539970_22540075_22541803_22542048_22550658_22550773_22567850_22567890_22573310_22573458_22591628_22591782_22607926_22608024_22609619_22609718_22714182
transcript_16537.known	chr10	+	1730	5	FSM	ENSG00000148450.13	ENST00000376510.8	1730	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	13.2476412994918	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTTTTGGCTAAGT	23094064	True	NA	NA	False	AATAAA	-18	NA	23095578	23122013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_23095727_23104143_23104245_23110241_23110319_23119303_23119452_23120757
transcript_16542.known	chr10	+	892	2	FSM	ENSG00000224215.1	ENST00000443224.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTATTATTATTATTAT	NA	False	NA	NA	False	AATATA	-35	NA	23343956	23345181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_23344091_23344423
transcript_16546.known	chr10	-	1939	9	FSM	ENSG00000099256.19	ENST00000320152.11	1939	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	6.95409052285056	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTTACTGTTTTTCT	-24951605	True	NA	-9	True	AATAAA	-26	NA	24952606	24848613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24849892_24851387_24851465_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_16551.known	chr10	-	747	8	FSM	ENSG00000099256.19	ENST00000376378.5	747	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.0692678043839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTTTTCTGAGGTTAAT	-24951583	True	NA	NA	False	TATAAA	-26	NA	24952584	24849706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24849892_24855317_24855365_24856912_24856996_24858391_24858410_24871997_24872064_24937183_24937368_24942329_24942437_24952527
transcript_16553.known	chr10	-	741	4	FSM	ENSG00000099256.19	ENST00000376376.3	741	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	24.9131825880731	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTAGTCTTCTAGTTCT	-24951591	True	NA	NA	False	GATAAA	-21	NA	24952592	24908300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_24908686_24937183_24937368_24942329_24942437_24952527
transcript_16557.known	chr10	+	273	1	FSM	ENSG00000273107.1	ENST00000610158.1	273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTGTATGAGTCTGT	24953064	False	NA	6	True	ACTAAA	-26	NA	24953240	24953513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_24953200_24953500
transcript_16558.known	chr10	+	3737	3	FSM	ENSG00000185875.13	ENST00000376356.5	3737	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	4	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	25015804	True	NA	NA	False	ATTAAA	-16	NA	25016611	25026664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_25016693_25021741_25021909_25023175
transcript_16559.known	chr10	+	3788	3	FSM	ENSG00000185875.13	ENST00000524413.5	3788	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	30	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAATGGACTACTGT	25015850	True	NA	NA	False	ATTAAA	-16	NA	25016657	25026664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_25016790_25021741_25021909_25023175
transcript_1656.known	chr1	+	440	2	FSM	ENSG00000228150.1	ENST00000445884.1	440	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGAGATCTTTATTT	9942905	False	NA	NA	False	NA	NA	NA	9942922	9949974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943026_9949637
transcript_16562.known	chr10	+	2723	8	FSM	ENSG00000095777.17	ENST00000376302.5	2723	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	6.29544701043734	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCACAGCTTTATCGCTAA	25933623	True	NA	NA	False	AATAAA	-15	NA	25934273	26023481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25996489_25996595_25997158_25997259_26016819_26016897_26021502
transcript_16567.nnic	chr10	+	1283	5	NNC	ENSG00000095777.17	novel	2723	8	NA	NA	-30	-60212	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_4	6.29980158417708	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTTGCTTCATTTTTGT	25934181	True	NA	4	True	ATTAAA	-18	NA	25934198	25956703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_25934329_25935743_25935831_25952093_25952279_25954873_25955009_25955957
transcript_16569.known	chr10	+	641	4	FSM	ENSG00000136750.13	ENST00000428517.2	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	2.94392028877595	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTATTTTATTTTTTTCT	26216605	False	NA	6	True	AATAAA	-20	NA	26216732	26219320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_26216886_26217609_26217670_26217841_26217992_26219042
transcript_16572.known	chr10	-	3515	11	FSM	ENSG00000136754.18	ENST00000376140.4	3515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	116.042621480213	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	-26857424	True	NA	-16	True	AATAAA	-22	NA	26860958	26746595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_16573.known	chr10	-	3515	10	FSM	ENSG00000136754.18	ENST00000376160.5	3515	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	73.0068489937759	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857439	True	NA	-13	True	AATAAA	-25	NA	26860973	26746592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_16574.known	chr10	-	3516	10	FSM	ENSG00000136754.18	ENST00000376139.6	3516	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	65.3425919365589	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857437	True	NA	-13	True	AATAAA	-25	NA	26860971	26746592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_16575.known	chr10	-	3467	10	FSM	ENSG00000136754.18	ENST00000376137.8	3467	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	136.926942762632	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-16	True	AATAAA	-22	NA	26861087	26746595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26755654_26755742_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_16578.known	chr10	-	3503	10	FSM	ENSG00000136754.18	ENST00000376138.7	3503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.940020997651	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26860987	False	NA	-13	True	AATAAA	-25	NA	26861030	26746592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_16582.known	chr10	-	3380	9	FSM	ENSG00000136754.18	ENST00000536334.5	3380	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.138821973818	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGATATCTTTTAAA	NA	False	NA	-16	True	AATAAA	-22	NA	26861087	26746595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26765217_26765319_26768851_26768993_26770244_26770346_26771074_26771090_26777064_26777242_26823137_26823306_26860746
transcript_16584.known	chr10	-	3441	9	FSM	ENSG00000136754.18	ENST00000376166.5	3441	9	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	84.2576962360116	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGATATCTTTTAAAATG	-26857452	True	NA	-13	True	AATAAA	-25	NA	26860986	26746592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_26748746_26751597_26751784_26759061_26759236_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_16585.nic	chr10	-	2280	9	NIC	ENSG00000136754.18	novel	3503	10	NA	NA	-10	-916	combination_of_known_junctions	FALSE	canonical	3	92	junction_2	76.6794260215868	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGATTCTATTTTCTCAA	-26860997	False	NA	-5	True	AATAAA	-22	NA	26861040	26747810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_26748746_26751597_26751784_26759061_26759239_26765217_26765319_26768851_26768993_26770244_26770346_26777064_26777242_26823137_26823306_26860746
transcript_16589.known	chr10	+	1584	12	FSM	ENSG00000148459.16	ENST00000376215.10	1584	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	12.6006690101809	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTGTCTTGATTTACCG	26694929	True	NA	17	True	AATAAA	-22	NA	26697700	26746798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_26697841_26702161_26702195_26704676_26704742_26705285_26705395_26709637_26709769_26720217_26720360_26723805_26723918_26724013_26724124_26735239_26735321_26735465_26735580_26742496_26742578_26746332
transcript_16590.nnic	chr10	-	797	4	NIC	ENSG00000283709.1	novel	3620	5	NA	NA	-1569	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.63299316185545	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTACAGTATTTCTATAA	-26939416	True	NA	-16	True	AATAAA	-30	NA	26939428	26931205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_26931563_26934412_26934517_26935424_26935628_26939295
transcript_16591.known	chr10	-	6775	34	FSM	ENSG00000107890.17	ENST00000376087.5	6775	34	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_17	8.98033766884434	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGGTTGCAGACACGATG	-27099149	True	NA	-74	True	AATATA	-34	NA	27100494	27004115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27005724_27006916_27006963_27012881_27013111_27014493_27014712_27017501_27017793_27022557_27022688_27024446_27024560_27028851_27028946_27029285_27029357_27033224_27033378_27034795_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046524_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_16593.known	chr10	-	2489	13	FSM	ENSG00000107890.17	ENST00000676299.1	2489	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	8.68067777691735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTAATCCCAGCACTTTGG	-27099032	False	NA	NA	False	NA	NA	NA	27100377	27063035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27080648_27080772_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27100084
transcript_16594.known	chr10	-	3089	25	FSM	ENSG00000107890.17	ENST00000676420.1	3089	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	10.7992251522454	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAATAGACACAATAAAAA	-27099149	True	NA	-27	True	CATAAA	-39	NA	27100494	27035672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27035753_27037185_27037324_27037870_27038055_27039964_27040179_27043425_27043568_27044156_27044191_27046352_27046521_27048800_27048980_27053319_27053391_27060344_27060418_27060511_27060541_27061143_27061243_27063987_27064082_27066486_27066549_27067156_27067287_27077337_27077541_27077632_27077694_27079088_27079162_27082802_27082834_27086538_27086610_27092405_27092513_27093348_27093523_27093684_27093800_27098179_27098327_27100084
transcript_16601.known	chr10	-	1747	13	FSM	ENSG00000107897.20	ENST00000375888.5	1747	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	48.9937637754938	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCTTAGTTTGTGATGAT	-27240335	False	NA	NA	False	AATGAA	-23	NA	27240558	27197352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_16602.known	chr10	-	3903	13	FSM	ENSG00000107897.20	ENST00000396271.8	3903	13	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_12	28.8631830076541	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGCTTTTATTACTTGTT	-27239973	True	NA	-1	True	AATAAA	-18	NA	27240797	27195213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318_27240485_27240673
transcript_16606.known	chr10	+	4132	12	FSM	ENSG00000120539.15	ENST00000375940.9	4132	12	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	39.0555865783015	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATCTGTCAACATCATT	27150239	True	NA	16	True	AATAAA	-18	NA	27155351	27187953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173117_27173260_27180952_27181067_27181479_27181582_27186378
transcript_16608.known	chr10	+	3623	12	FSM	ENSG00000120539.15	ENST00000375946.8	3623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	31.9242388287237	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATTGTAATTTACTTG	27154689	False	NA	12	True	AATAAA	-17	NA	27154823	27186919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101_27167275_27169943_27171084_27173120_27173260_27180952_27181067_27181479_27181582_27186378
transcript_1661.known	chr1	-	652	5	FSM	ENSG00000162441.12	ENST00000488540.5	652	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	54.4397602860262	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATAGGCCGGGTGTGGTGG	-9933449	False	NA	-3	True	AATAAA	-23	NA	9935620	9922112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9922359_9931890_9931973_9932802_9932899_9934761_9934861_9935491
transcript_16610.known	chr10	-	4173	12	FSM	ENSG00000107897.20	ENST00000375897.7	4173	12	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_5	12.9142115324216	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGCTTTTATTACTTGT	-27240656	False	NA	-2	True	AATAAA	-17	NA	27240879	27195214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27217979_27218184_27219722_27219858_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_16611.known	chr10	-	3739	12	FSM	ENSG00000107897.20	ENST00000676732.1	3739	12	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	61.2005239538961	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTAATGAGAAATGATATG	-27240408	False	NA	-17	True	AATAAA	-2	NA	27240631	27195229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27197443_27204439_27204550_27205197_27205249_27208245_27208446_27210813_27211082_27215534_27215642_27219722_27219858_27223206_27223240_27223337_27223453_27231747_27231821_27235091_27235213_27240318
transcript_1662.known	chr1	-	945	8	FSM	ENSG00000162441.12	ENST00000377213.1	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	38.4447655734822	736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATGCTCTTCAT	NA	False	NA	-24	True	CATAAA	-14	NA	9943407	9930252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623_9942783_9943348
transcript_16627.nic	chr10	+	1358	7	ISM	ENSG00000120539.15	ENST00000342386.10	2968	11	-50	19383	-32	-19177	5prime_fragment	FALSE	canonical	3	173	junction_3	16.3137637867198	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGGTGGACCTCACTTGT	27150207	True	NA	4	True	AATAAA	-18	NA	27155319	27167541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101
transcript_16628.nic	chr10	+	1477	7	ISM	ENSG00000120539.15	ENST00000342386.10	2968	11	-50	19264	-32	-19058	5prime_fragment	FALSE	canonical	3	173	junction_3	16.3137637867198	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTTTCCTGTCAGTTTC	27150207	True	NA	4	True	TTTAAA	-22	NA	27155319	27167660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_27155613_27158548_27158687_27159618_27159759_27161093_27161183_27165063_27165171_27165388_27165540_27167101
transcript_1663.known	chr1	-	1405	7	FSM	ENSG00000162441.12	ENST00000400903.6	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.2202018532156	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGACCATCCCCCAGCCT	-9940597	False	NA	-22	True	AATAAA	-17	NA	9942768	9929719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_9930458_9931890_9931973_9932802_9932899_9934761_9934861_9935491_9935628_9936518_9936628_9942623
transcript_16632.known	chr10	-	3474	3	FSM	ENSG00000136758.20	ENST00000477432.1	3474	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	487.5	150	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTTTGTTCCAATTA	-27154900	True	NA	-5	True	AATAAA	-14	NA	27155266	27145418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27147669_27148905_27149041_27154177
transcript_16635.known	chr10	+	1800	7	FSM	ENSG00000099246.18	ENST00000683755.1	1800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	220.331127069136	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATATTGTAGATTTTTTT	27500080	True	NA	28	True	AATAAA	-39	NA	27504311	27539185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27533940_27533995_27537875
transcript_16636.known	chr10	+	870	4	FSM	ENSG00000099246.18	ENST00000683924.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	263.324050469294	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTTCTGGGATGTTTGA	27532472	True	NA	15	True	AATAAA	-15	NA	27532536	27538512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27532580_27533734_27533854_27533927_27533999_27537875
transcript_16637.known	chr10	+	985	6	FSM	ENSG00000099246.18	ENST00000465772.5	985	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_5	239.087097100617	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATAAAGAGCATGATTC	27500145	False	NA	-8	True	AATAGA	-34	NA	27504376	27538489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_27504438_27509874_27509931_27526827_27526890_27532506_27532580_27533734_27533854_27537875
transcript_16638.known	chr10	-	3603	20	FSM	ENSG00000169126.16	ENST00000305242.10	3603	20	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	6.71130026496635	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGTTTCATAGTTGTT	-27998556	True	NA	-5	True	AATAAA	-20	NA	27999079	27812167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_27812626_27860624_27860847_27862433_27862623_27907662_27907778_27935009_27935253_27936725_27936881_27939896_27940008_27940562_27940806_27944221_27944432_27944815_27944963_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_1664.known	chr1	+	514	2	FSM	ENSG00000173614.14	ENST00000492735.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATACTAGAGAACCGG	9942999	True	NA	NA	False	NA	NA	NA	9943487	9972503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9943516_9972017
transcript_16642.nnic	chr10	-	2166	11	NNC	ENSG00000169126.16	novel	555	3	NA	NA	-24	-2964	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	8.2951793229562	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTGTTAATGTTTCC	-27998580	True	NA	NA	False	TTTAAA	-20	NA	27999103	27960012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_27960645_27961567_27961716_27968922_27969019_27971107_27971314_27981465_27981583_27983842_27983980_27984183_27984291_27985018_27985212_27987385_27987544_27994918_27995181_27998993
transcript_16644.known	chr10	+	5924	14	FSM	ENSG00000095787.24	ENST00000375664.8	5924	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	109.894677927033	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCGGTGTGTTTCAATA	28532482	False	NA	NA	False	AATACA	-21	NA	28532492	28623112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_16649.nic	chr10	+	688	4	ISM	ENSG00000095787.24	ENST00000428935.6	1839	8	230	25025	-45	132	5prime_fragment	FALSE	canonical	3	31	junction_1	163.06031603878	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAACCCATGGCAAGTCTT	28532712	False	NA	NA	False	NA	NA	NA	28532722	28583568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398
transcript_16650.known	chr10	+	2176	13	FSM	ENSG00000095787.24	ENST00000375646.5	2176	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	164.364495862093	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGGGGGGGTTAATTTA	28532131	False	NA	NA	False	TTTAAA	-14	NA	28532783	28619976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583398_28583506_28589735_28589852_28590719_28590833_28608185_28608432_28610710_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_16651.known	chr10	+	3513	14	FSM	ENSG00000095787.24	ENST00000628285.3	3513	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	143.130593738394	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATAAAATTACCTTGAC	28532118	True	NA	53	True	AATAAA	-16	NA	28532770	28620986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_28533008_28533997_28534035_28535561_28535758_28583405_28583506_28589735_28589852_28590719_28590833_28595732_28596042_28608185_28608432_28610698_28610822_28611773_28611923_28614566_28614686_28616172_28616363_28617656_28617785_28619536
transcript_16654.nnic	chr10	+	931	2	NNC	ENSG00000232624.8	novel	267	3	NA	NA	3001	133	intron_retention	FALSE	canonical	3	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTCTAAATCATCTAT	28809045	True	NA	NA	False	AATAAA	-18	NA	28809121	28813591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_28809352_28812890
transcript_16655.known	chr10	-	489	1	FSM	ENSG00000229605.5	ENST00000480465.1	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAAAAATAATAAAGG	NA	False	NA	NA	False	NA	NA	NA	28899484	28898995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_28899000_28899500
transcript_16656.known	chr10	-	563	6	FSM	ENSG00000197321.16	ENST00000674490.1	563	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	7.6	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-29732855	True	NA	NA	False	AAGAAA	-20	NA	29735911	29555051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735754
transcript_16659.nnic	chr10	-	409	4	NNC	ENSG00000197321.16	novel	563	6	NA	NA	-972	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	31.7944789057611	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAAGATCTTTATAGTGGG	-29635793	True	NA	NA	False	AAGAAA	-20	NA	29635944	29555051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_29555109_29563200_29563293_29569254_29569313_29635742
transcript_16661.known	chr10	-	6729	36	FSM	ENSG00000197321.16	ENST00000375400.7	6729	36	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_35	23.8150012747068	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAAGCATGTTCCTTTCT	-29732748	True	NA	-6	True	AATAAA	-42	NA	29735804	29457337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_29458334_29458433_29458590_29462276_29462402_29463491_29463636_29465594_29465751_29467741_29467876_29470275_29470484_29471137_29471244_29473837_29473990_29480536_29480814_29481583_29481729_29484655_29484832_29486084_29486231_29486409_29486558_29487162_29487300_29488600_29488757_29490846_29491020_29493213_29493392_29494913_29495001_29495091_29495182_29499115_29499264_29512734_29512862_29522409_29522636_29523450_29524028_29524471_29524716_29529704_29529845_29530606_29530669_29531253_29531289_29550596_29551264_29554782_29554935_29555050_29555109_29563200_29563293_29569254_29569313_29657968_29658069_29686552_29686652_29735750
transcript_16662.known	chr10	-	613	4	FSM	ENSG00000197321.16	ENST00000674350.1	613	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.7944789057611	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGAAAGAATTCTTAGAA	-29634808	False	151	NA	False	NA	NA	NA	29634959	29555078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_29555109_29563200_29563293_29569254_29569313_29634526
transcript_16663.known	chr10	+	1243	3	FSM	ENSG00000224597.11	ENST00000423223.6	3228	3	24	1961	1	486	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTGGTGGTTCACTG	29409528	True	NA	NA	False	ATTAAA	-28	NA	29409557	29483918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_29409659_29415356_29415413_29482832
transcript_16667.known	chr10	-	5560	9	FSM	ENSG00000107951.15	ENST00000263063.9	5560	9	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_5	76.2789903905394	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTCTGCTGTCATTTC	-30348960	True	NA	NA	False	AATAAA	-18	NA	30349278	30309800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30313972_30315962_30316037_30316117_30316211_30322390_30322618_30326423_30326636_30336802_30337028_30340225_30340451_30341467_30341641_30349118
transcript_1667.known	chr1	+	625	4	FSM	ENSG00000162444.12	ENST00000294435.8	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	0.816496580927726	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTTTTCCTTTCCG	9996906	True	NA	10	True	AATAAA	-15	NA	9997227	10016021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9997332_10007569_10007749_10008172_10008275_10015781
transcript_16671.known	chr10	-	695	3	FSM	ENSG00000107951.15	ENST00000421701.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	3	803	junction_2	20.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTATTGATGACTGGC	-30348843	False	NA	NA	False	NA	NA	NA	30349161	30339971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30340451_30341467_30341641_30349118
transcript_16674.known	chr10	-	541	2	FSM	ENSG00000228800.1	ENST00000440932.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGATTTGTGTTCTCTGCT	NA	False	NA	NA	False	AAAAAG	-16	NA	30554483	30553853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30554237_30554325
transcript_16676.known	chr10	-	3164	7	FSM	ENSG00000183621.15	ENST00000436087.6	3164	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	4.87909372276815	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACATGCATGTGTCCTTC	-31031839	True	NA	NA	False	AATATA	-29	NA	31031937	30844637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_30845574_30848530_30850368_30876997_30877066_30908932_30909016_30941574_30941652_30984368_30984427_31031832
transcript_16678.known	chr10	-	585	2	FSM	ENSG00000237036.6	ENST00000441257.1	585	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATATCAAGAAAGTCGTC	-31318593	True	NA	NA	False	NA	NA	NA	31319027	31318087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31318541_31318895
transcript_16681.known	chr10	-	2503	1	FSM	ENSG00000237036.6	ENST00000607166.1	2503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGTGTGACGGTTGCTT	-31318596	True	NA	1	True	AATAAA	-19	NA	31319030	31316527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31316500_31319000
transcript_16683.known	chr10	-	5060	20	FSM	ENSG00000165322.18	ENST00000344936.7	5060	20	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_16	32.1572486798743	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGTTGCAGATTTAGAAAA	-31921017	True	NA	33	True	AAAAAG	-1	NA	31928831	31805397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_16686.known	chr10	-	4958	19	FSM	ENSG00000165322.18	ENST00000375245.8	4958	19	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_15	33.2636772203889	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	-31921062	True	NA	27	True	NA	NA	NA	31928876	31805403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839304_31839320_31839636_31839712_31843460_31843587_31852516_31852598_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_1669.nnic	chr1	+	488	3	NIC	ENSG00000162444.12	novel	861	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	23	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTTTTTCCTTTCC	9996863	True	NA	9	True	AATAAA	-14	NA	9997184	10016020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_9997332_10008172_10008275_10015781
transcript_16691.nnic	chr10	-	1219	4	NNC	ENSG00000165322.18	novel	5060	20	NA	NA	-2	-63900	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	77.6158632125046	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCCGTTTTTTTTTTTG	-31921064	True	NA	4	True	AATAAA	-22	NA	31928878	31884343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_31884573_31908171_31908927_31910524_31910564_31928682
transcript_16692.known	chr10	-	5084	19	FSM	ENSG00000165322.18	ENST00000396144.8	5084	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	40.7514674430926	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGTAGTTGCAGATTT	-31921062	True	NA	27	True	NA	NA	NA	31928876	31805403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_31807833_31808648_31808752_31808993_31809129_31809229_31809308_31810648_31810748_31812706_31812824_31814258_31814362_31817787_31817887_31820386_31820489_31826303_31826386_31831738_31831801_31839636_31839712_31843460_31843587_31852516_31852598_31854065_31854207_31861394_31861659_31908171_31908927_31910524_31910564_31928682
transcript_16694.known	chr10	-	5866	26	FSM	ENSG00000170759.11	ENST00000302418.5	5866	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	134.906403109712	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATGACTTTCTTAAAAC	-32048886	True	NA	-15	True	AATAAA	-19	NA	32056425	32009014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32011517_32015508_32015660_32017142_32017360_32018051_32018157_32018315_32018388_32018501_32018563_32019857_32019960_32021021_32021132_32021225_32021288_32022139_32022258_32022847_32023037_32028427_32028572_32031072_32031280_32032705_32032775_32033844_32034039_32034689_32034839_32035521_32035668_32035889_32035995_32037253_32037379_32037519_32037608_32038162_32038219_32038777_32038827_32039326_32039432_32040383_32040458_32048463_32048552_32055847
transcript_16698.known	chr10	-	3997	14	FSM	ENSG00000120616.16	ENST00000319778.11	3997	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.77315337490176	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-32344410	True	NA	-33	True	AATAAA	-29	NA	32347158	32267750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_16699.known	chr10	-	3909	14	FSM	ENSG00000120616.16	ENST00000375110.6	3909	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	4.67651820109867	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTAGTGGTCTTTTGCTT	-32378397	True	NA	-33	True	AATAAA	-29	NA	32378798	32267750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32269136_32271553_32271918_32272025_32272168_32273162_32273282_32284697_32285051_32286693_32286843_32286925_32287016_32287097_32287275_32291162_32291323_32292495_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32378490
transcript_1670.known	chr1	+	861	5	FSM	ENSG00000162444.12	ENST00000315901.4	861	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.0104144070859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAAGTTTTTCCTTTCC	9996884	True	NA	9	True	AATAAA	-14	NA	9997205	10016020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_9997332_10004092_10004308_10007569_10007749_10008172_10008275_10015781
transcript_16701.nic	chr10	-	1073	5	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-399	10682	0	-10682	5prime_fragment	FALSE	canonical	2	9	junction_3	2.54950975679639	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGAGAGCTATTGCACT	-32347204	False	NA	NA	False	GATAAA	-16	NA	32347218	32292540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32292645_32292987_32293195_32293591_32293738_32305771_32305932_32346762
transcript_16704.nic	chr10	-	854	4	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-399	11244	0	-11244	5prime_fragment	FALSE	canonical	2	9	junction_2	2.62466929133727	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGAGGGCCATCTCTTA	-32347204	False	NA	NA	False	ATTAAA	-12	NA	32347218	32293102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32293195_32293591_32293738_32305771_32305932_32346762
transcript_16707.nic	chr10	-	743	2	ISM	ENSG00000120616.16	ENST00000479380.2	2399	13	-119	33788	-5	-23643	5prime_fragment	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAGATATAGAAATAGTTT	-32378791	False	NA	NA	False	AAGAAA	-13	NA	32378803	32305501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32305932_32378490
transcript_16708.known	chr10	-	907	2	FSM	ENSG00000120616.16	ENST00000480402.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-32347204	False	NA	-1	True	ATTAAA	-16	NA	32347218	32345111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32345563_32346762
transcript_16709.known	chr10	-	871	2	FSM	ENSG00000120616.16	ENST00000469059.2	871	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCTTGTCTTTTGGTTTT	-32344373	True	NA	-1	True	ATTAAA	-16	NA	32347121	32345111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32345624_32346762
transcript_1671.known	chr1	+	4772	27	FSM	ENSG00000130939.20	ENST00000253251.12	4772	27	0	0	0	0	multi-exon	FALSE	canonical	2	219	junction_3	40.7600134718434	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTCCCCTCTCCCCCT	NA	False	NA	-45	True	NA	NA	NA	10032831	10180367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10033695_10072027_10072215_10095460_10095597_10101107_10101196_10102947_10103093_10105515_10105745_10117458_10117601_10119512_10119614_10121961_10122077_10126793_10126878_10129391_10129449_10130499_10130617_10130714_10130814_10132368_10132483_10134987_10135187_10137066_10137206_10144939_10145040_10146962_10147091_10149183_10149283_10151325_10151562_10158355_10158483_10161141_10161287_10168135_10168271_10171137_10171330_10178643_10178819_10179415_10179563_10179894
transcript_16712.nnic	chr10	-	900	2	ISM	ENSG00000120616.16	ENST00000495790.1	7386	7	-416	23646	-17	-23646	5prime_fragment	FALSE	canonical	3	15	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTCAGATATAGAAATAG	-32347221	False	NA	NA	False	AAGAAA	-10	NA	32347235	32305504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32305932_32346762
transcript_16721.known	chr10	-	402	1	FSM	ENSG00000231245.2	ENST00000426049.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGAAAAAGTAAAAGTTA	NA	False	NA	NA	False	NA	NA	NA	32511737	32511335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32511300_32511700
transcript_16722.known	chr10	-	3780	17	FSM	ENSG00000150093.20	ENST00000678766.1	3780	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	636.671962238012	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTAAAATACTTAAATCGGA	-32929358	True	NA	-20	True	ATTAAA	-5	NA	32958253	32900411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32901636_32906464_32906581_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32958144
transcript_16723.known	chr10	-	3955	17	FSM	ENSG00000150093.20	ENST00000676964.1	3955	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_14	618.876754693533	404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929337	True	NA	-16	True	ATTAAA	-3	NA	32958232	32900332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933350_32933584_32935491_32935559_32958144
transcript_16724.known	chr10	-	3839	17	FSM	ENSG00000150093.20	ENST00000679187.1	3839	17	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_14	618.716132280184	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929352	True	NA	-16	True	ATTAAA	-3	NA	32958247	32900332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32933481_32933584_32935491_32935559_32958144
transcript_16726.known	chr10	-	3741	16	FSM	ENSG00000150093.20	ENST00000678479.1	3741	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	499.225729393917	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGAGGAAAAGCATTTCT	-32929352	True	NA	-16	True	ATTAAA	-3	NA	32958247	32900332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932510_32932601_32935491_32935559_32958144
transcript_16734.known	chr10	-	3784	16	FSM	ENSG00000150093.20	ENST00000396033.6	3784	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_15	471.02679329312	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGTTGGTGGGTAGT	-32957867	False	28895	-2	True	ATTAAA	-17	NA	32957894	32900318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_32901636_32908367_32908535_32910222_32910456_32911447_32911671_32911885_32912125_32919884_32920085_32920244_32920386_32922256_32922347_32922639_32922736_32923584_32923741_32925870_32926110_32928093_32928265_32929821_32930045_32932514_32932601_32935491_32935559_32957758
transcript_16735.nic	chr10	-	369	4	ISM	ENSG00000150093.20	ENST00000484088.5	580	5	-29	3971	0	0	5prime_fragment	FALSE	canonical	3	1748	junction_1	34.6538437823121	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAAATAAAAATGTAA	-32929352	True	NA	NA	False	NA	NA	NA	32958247	32929931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_32930045_32932514_32932601_32935491_32935559_32958144
transcript_16737.known	chr10	-	2213	12	FSM	ENSG00000099250.18	ENST00000374822.8	2213	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	6.42438536147446	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTACCTCTCTTCTC	-33334604	False	48	-4	True	AATAAA	-18	NA	33334642	33197620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_33197710_33202890_33202996_33207571_33207717_33213385_33213718_33221718_33221864_33226133_33226290_33254027_33254195_33256315_33256472_33263645_33263874_33270674_33270857_33330707_33330883_33334309
transcript_16738.known	chr10	+	302	2	FSM	ENSG00000226386.1	ENST00000446211.1	302	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAAATGTCTGCAAAGA	34815756	False	NA	6	True	AATAAA	-23	NA	34815766	34816386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_34815802_34816119
transcript_16740.known	chr10	-	4312	22	FSM	ENSG00000108094.17	ENST00000374748.5	4312	22	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_21	115.900614238892	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	-35090296	False	NA	0	True	GATAAA	-16	NA	35090364	35008550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35089895_35090002_35090178
transcript_16741.known	chr10	-	4233	21	FSM	ENSG00000108094.17	ENST00000374751.7	4233	21	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_20	57.8943866018114	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTTTTCTTAAATAT	NA	False	NA	0	True	GATAAA	-16	NA	35090642	35008550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_35010443_35011847_35011965_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_16743.known	chr10	-	4115	20	FSM	ENSG00000108094.17	ENST00000626172.3	4116	20	-47	48	0	-1	multi-exon	FALSE	canonical	1	5	junction_1	103.343227715615	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCCTTTTTTTCTTAAATA	NA	False	NA	-1	True	GATAAA	-15	NA	35090642	35008551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_35010443_35013698_35013801_35016191_35016395_35025131_35025199_35028809_35028888_35029487_35029641_35031299_35031387_35031490_35031620_35032434_35032495_35033165_35033274_35035171_35035297_35038919_35039083_35044565_35044677_35044771_35044869_35049682_35049766_35054433_35054540_35060873_35060969_35062959_35063063_35071198_35071340_35090429
transcript_16755.nic	chr10	+	1380	6	NIC	ENSG00000095794.20	novel	2020	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_4	37.8713612113428	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAAGAATGGTGGCTT	35125321	True	NA	-4	True	AATATA	-3	NA	35126947	35211865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133_35179277_35206894_35207052_35211253
transcript_16768.nic	chr10	+	1271	5	NIC	ENSG00000095794.20	novel	2020	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	59	junction_3	44.1871021905714	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAAGAATGGTGGCTT	35126868	False	NA	-4	True	AATATA	-3	NA	35126932	35211865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211253
transcript_16772.known	chr10	+	747	5	FSM	ENSG00000095794.20	ENST00000461968.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	49.1579088245218	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGAAACCTTGAAAGACAT	35125321	True	NA	NA	False	NA	NA	NA	35126947	35211758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35178888_35178987_35179133_35179277_35206894_35207052_35211655
transcript_16776.known	chr10	+	1207	4	FSM	ENSG00000095794.20	ENST00000374726.7	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	23.3285709425636	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGTGCATTTTAATGGA	35126858	False	NA	8	True	AATAAA	-19	NA	35126922	35179847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35148367_35148492_35178888_35178987_35179133
transcript_16777.known	chr10	+	1074	4	FSM	ENSG00000095794.20	ENST00000490460.5	1074	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	47.1616605117146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTATGAACTGAAGGCAGC	35125332	True	NA	-58	True	AAAACA	-18	NA	35126958	35211811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35148367_35148492_35206894_35207052_35211253
transcript_1678.known	chr1	+	1273	3	FSM	ENSG00000130939.20	ENST00000377153.5	1273	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	145.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCCTCTGTATGTCTCT	10033255	False	NA	NA	False	AATAAA	-19	NA	10033273	10073118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10033695_10072027_10072215_10072453
transcript_16787.known	chr10	+	582	4	FSM	ENSG00000095794.20	ENST00000468236.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.0800688297608	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACAATATATAGCTGGCAA	35195884	True	NA	-16	True	NA	NA	NA	35195908	35211853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35196100_35201450_35201487_35206894_35207052_35211655
transcript_16788.known	chr10	+	721	3	FSM	ENSG00000095794.20	ENST00000469949.6	721	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	60.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTTCACTATTGCTCC	35125475	False	NA	NA	False	AATAAA	-19	NA	35127101	35154565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35148367_35148492_35154060
transcript_16791.known	chr10	+	415	3	FSM	ENSG00000095794.20	ENST00000482633.5	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	52	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTAGCTTTAAGTCTTC	35125421	True	NA	NA	False	AATACA	-29	NA	35127047	35179304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35178888_35178987_35179133
transcript_16792.known	chr10	+	1416	3	FSM	ENSG00000095794.20	ENST00000460270.5	1416	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	29.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGTGTAATATAAAAGA	35125490	False	NA	-18	True	TTTAAA	-30	NA	35127116	35212435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35206894_35207052_35211253
transcript_16796.known	chr10	+	1030	3	FSM	ENSG00000095794.20	ENST00000474362.5	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	13.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTTAGGAAAGGATGAT	NA	False	NA	5	True	AATAAA	-21	NA	35126790	35212125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35127194_35206894_35207052_35211655
transcript_16799.known	chr10	+	1895	3	FSM	ENSG00000095794.20	ENST00000356917.9	1895	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	35	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTTCAGGGAACAAGCCC	35195136	True	NA	-28	True	AATAAA	-1	NA	35195146	35212923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35195215_35206894_35207052_35211253
transcript_168.known	SIRV2	-	1971	11	FSM	SIRV2A	SIRV202	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	1140.72846900566	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCGCTCTATAGCTGTATC	NA	False	NA	NA	False	NA	NA	NA	5911	1035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3326_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_16800.known	chr10	+	1049	3	FSM	ENSG00000095794.20	ENST00000488328.5	1049	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	19	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTAGTGTTGGTTTAAT	35195122	True	NA	12	True	TATAAA	-14	NA	35195132	35212465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35195215_35206894_35207052_35211655
transcript_16803.known	chr10	+	626	3	FSM	ENSG00000095794.20	ENST00000474931.5	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTGAATTGGGAATGTTG	35195877	True	NA	NA	False	NA	NA	NA	35195901	35211524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35196100_35206894_35207052_35211253
transcript_16806.known	chr10	+	469	3	FSM	ENSG00000095794.20	ENST00000490511.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGCTTCTTTTCTTTGT	35195984	False	NA	7	True	AATATA	-14	NA	35196008	35211876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35196100_35206894_35207052_35211655
transcript_16809.known	chr10	+	1625	3	FSM	ENSG00000095794.20	ENST00000344351.5	1625	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	36	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTGATGACATATTTTT	35195892	True	NA	42	True	TATAAA	-44	NA	35195916	35212495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35196143_35206894_35207052_35211253
transcript_16812.known	chr10	+	5068	10	FSM	ENSG00000108100.18	ENST00000374704.8	5068	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	54.2069650665705	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGCCTGCCTTCCTGCT	35334734	True	NA	NA	False	AATAAA	-29	NA	35336508	35572667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_35337208_35483403_35483479_35501500_35501536_35516522_35516624_35525963_35526000_35529972_35530031_35530123_35530244_35553018_35553186_35566022_35566186_35569053
transcript_16816.nnic	chr10	-	601	3	NNC	ENSG00000271335.6	novel	526	3	NA	NA	-14	-20098	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGCTGTGGAGTTGTTTTG	-35336167	True	NA	NA	False	AATAAA	-33	NA	35336415	35335429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_35335686_35335927_35336077_35336219
transcript_16821.known	chr10	-	1286	7	FSM	ENSG00000198105.16	ENST00000374648.7	1286	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	9.3704618645804	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTCCTAATTATTTTGC	-37857483	False	NA	NA	False	AATAAA	-14	NA	37857558	37830855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_37831313_37833024_37833117_37837616_37837713_37837984_37838112_37856295_37856338_37856434_37856533_37857184
transcript_16824.nnic	chr10	+	740	6	NNC	ENSG00000189180.16	novel	6196	6	NA	NA	-1	83	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_5	69.6695055242966	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATGAATTTAATGCCT	38007590	True	NA	130	True	GATAAA	-16	NA	38010648	38054621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38025347_38025412_38054374
transcript_16828.nnic	chr10	+	808	6	NNC	ENSG00000189180.16	novel	6196	6	NA	NA	-58	83	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_4	69.5488317658895	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGATGAATTTAATGCCT	NA	False	NA	130	True	GATAAA	-16	NA	38010591	38054621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38034325_38034401_38054374
transcript_1683.nic	chr1	+	707	6	ISM	ENSG00000054523.19	ENST00000635499.1	2098	13	15853	544	3351	-544	3prime_fragment	FALSE	canonical	3	97	junction_1	14.2772546380598	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTGTGATTCTTGA	10368504	False	NA	3	True	GATAAA	-18	NA	10368516	10376645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_10368539_10371140_10371263_10374315_10374466_10374853_10375047_10375254_10375374_10376544
transcript_16831.known	chr10	+	1530	6	FSM	ENSG00000189180.16	ENST00000469037.2	1530	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	59.4218814915852	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGATCATCTCGCTGCAA	38007627	True	NA	NA	False	NA	NA	NA	38010685	38065088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38010784_38012297_38012351_38016870_38017016_38017290_38017387_38054374_38054512_38064087
transcript_16837.known	chr10	+	539	5	FSM	ENSG00000189180.16	ENST00000478556.1	539	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	61.4430630746873	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTCAGTGTGATTCATG	38007640	True	NA	47	True	NA	NA	NA	38010698	38054538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38010784_38012297_38012351_38016874_38017016_38017290_38017387_38054374
transcript_16847.known	chr10	+	2854	4	FSM	ENSG00000189180.16	ENST00000628825.2	2854	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	64.8553947040816	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGGGCACCTAACAAT	38007596	True	NA	27	True	AATAAA	-39	NA	38010654	38056861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_38010784_38016870_38017016_38017290_38017387_38054377
transcript_16853.nnic	chr10	+	1435	9	NNC	ENSG00000099251.14	novel	1401	8	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	21.6531608547113	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTTTCCTTCCTTTTG	38356330	True	NA	NA	False	AATAAA	-14	NA	38356362	38378505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_38356490_38358311_38358516_38361279_38361323_38362239_38362339_38363521_38363611_38365433_38365630_38369952_38370010_38371074_38371174_38377984
transcript_1686.known	chr1	+	2268	13	FSM	ENSG00000142657.21	ENST00000270776.13	2268	13	0	0	0	0	multi-exon	FALSE	canonical	2	1023	junction_6	184.027681341694	2281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTCTGATTTATTTCC	10377630	True	NA	18	True	ATTAAA	-18	NA	10399063	10420511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10399126_10399628_10399705_10400392_10400573_10403070_10403137_10404160_10404280_10408070_10408141_10411417_10411553_10413061_10413252_10416986_10417118_10417375_10417510_10418825_10418926_10419416_10419540_10419629
transcript_16860.nnic	chr10	-	566	3	NIC	ENSG00000215146.5	novel	4951	6	NA	NA	-21	-158	combination_of_known_splicesites	FALSE	canonical	3	29	junction_1	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTGGCCAATTCTTTCA	-42361169	True	NA	NA	False	AATAGA	-43	NA	42367995	42337940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42338241_42360948_42361035_42367815
transcript_16863.known	chr10	-	556	3	FSM	ENSG00000215146.5	ENST00000609502.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACATAGGGGCATCTT	-42361130	True	NA	NA	False	NA	NA	NA	42367956	42352799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42352993_42367505_42367728_42367815
transcript_16865.known	chr10	-	576	2	FSM	ENSG00000215146.5	ENST00000609034.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGTGTGAAGAATGTGACA	-42361107	True	NA	NA	False	ACTAAA	-12	NA	42367933	42337782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42338241_42367815
transcript_16866.known	chr10	-	6590	3	FSM	ENSG00000215146.5	ENST00000609841.1	6590	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATGTACTTTTTTATTGGG	-42361148	True	NA	-14	True	ATTAAA	-27	NA	42367974	42331865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42338241_42340500_42340557_42367815
transcript_16868.known	chr10	+	2254	5	FSM	ENSG00000185904.12	ENST00000429940.7	2254	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2.9474565306379	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	42475420	True	NA	NA	False	NA	NA	NA	42475542	42495337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42475881_42477260_42477443_42486978_42487127_42492079_42492343_42494014
transcript_16872.known	chr10	+	2253	5	FSM	ENSG00000185904.12	ENST00000424751.3	2253	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.26468052730799	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	42475505	True	NA	NA	False	NA	NA	NA	42475627	42495337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42475965_42477260_42477443_42486978_42487127_42492079_42492343_42494014
transcript_16874.known	chr10	+	1980	4	FSM	ENSG00000185904.12	ENST00000653292.1	1980	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTGTGTGTGTCTT	42475431	True	NA	NA	False	NA	NA	NA	42475553	42495337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42475881_42477260_42477443_42486978_42487127_42494014
transcript_16875.known	chr10	+	2304	2	FSM	ENSG00000185904.12	ENST00000670637.1	2304	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTTGAGATCTAAAAACAAA	42475519	True	NA	NA	False	NA	NA	NA	42475641	42479325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42475881_42477260
transcript_1689.known	chr1	+	571	6	FSM	ENSG00000251503.8	ENST00000602787.6	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	88.2994903722553	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGACTTTCCTCGCTT	10428165	True	NA	NA	False	TTTAAA	-38	NA	10430434	10451411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264_10442442_10451376
transcript_16893.nic	chr10	-	2234	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-12	1232	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	35.9521904756859	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATATGGCATAGCAATTTT	-42636605	True	NA	NA	False	AATAAA	-22	NA	42638582	42572952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42574679_42594594_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16898.nic	chr10	-	1002	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	35.9521904756859	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-42636605	True	NA	NA	False	NA	NA	NA	42638582	42574184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42574679_42594594_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16901.known	chr10	-	1941	6	FSM	ENSG00000196693.15	ENST00000486187.5	1941	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	27.9885690952574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTCATTCTACATGGTTT	-42636576	True	NA	-7	True	AATACA	-24	NA	42638553	42581593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42583124_42594594_42594700_42614281_42614359_42631928_42632025_42636919_42636973_42638473
transcript_16905.nic	chr10	-	955	6	NIC	ENSG00000196693.15	novel	1941	6	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	30.5587957877924	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTCTACATAATTTTAA	-42636619	True	NA	NA	False	NA	NA	NA	42638596	42582690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42583124_42594594_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16909.nic	chr10	-	1304	6	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	-91	-4846	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	19.2499350648255	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGTGGGAAAGCTTTCT	-42636684	True	NA	NA	False	GATAAA	-24	NA	42638661	42593954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42594700_42614281_42614359_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16922.nic	chr10	-	876	5	NIC	ENSG00000196693.15	novel	5982	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_4	28.8877136513086	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTCTACATAATTTTAA	-42636593	True	NA	NA	False	NA	NA	NA	42638570	42582690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_42583124_42594594_42594700_42631928_42632025_42632294_42632440_42638473
transcript_16925.known	chr10	-	5982	5	FSM	ENSG00000196693.15	ENST00000359467.8	5982	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	26.0240273593462	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGAGGAACATCTTGTTT	-42636593	True	NA	-11	True	AATAAA	-20	NA	42638570	42589108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42594700_42631928_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16938.known	chr10	-	463	4	FSM	ENSG00000196693.15	ENST00000476796.2	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGATGGAGAATACTG	-42636544	True	NA	NA	False	NA	NA	NA	42638521	42631807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42632025_42632294_42632440_42636919_42636973_42638473
transcript_16940.known	chr10	+	790	2	FSM	ENSG00000285884.2	ENST00000649715.2	822	2	32	0	32	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTCTCTCCCGTCTCTG	42638274	True	NA	2	True	AATAAA	-18	NA	42638313	42645542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42638554_42644992
transcript_16941.known	chr10	-	1701	4	FSM	ENSG00000233515.2	ENST00000668437.1	1701	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTATGAGTCTGCCTT	NA	False	NA	NA	False	AATAAA	-12	NA	42691723	42673014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_42674358_42683357_42683461_42685950_42686017_42691534
transcript_16942.known	chr10	+	7759	23	FSM	ENSG00000165733.8	ENST00000374518.6	7759	23	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	78.1601978562338	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATGAGTCAGTGGCATT	42769728	True	NA	10	True	AATAAA	-22	NA	42782794	42834937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473_42797232_42797421_42797524_42798467_42798626_42802136_42802219_42816598_42816673_42817317_42817495_42820235_42820425_42820507_42820689_42820933_42820993_42822061_42822185_42823117_42823266_42823608_42823785_42830260_42830423_42830865
transcript_16950.nic	chr10	+	2027	10	ISM	ENSG00000165733.8	ENST00000374518.6	7759	23	-20	37755	-20	-37755	5prime_fragment	FALSE	canonical	3	437	junction_1	63.9722161914408	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAAGATTACAAGGA	42769708	True	NA	19	True	NA	NA	NA	42782774	42797182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_42782831_42784361_42784571_42785481_42785673_42787167_42787248_42790322_42790512_42791626_42791770_42792492_42792615_42792956_42793145_42793851_42793992_42796473
transcript_16952.nic	chr10	-	1662	12	NIC	ENSG00000198915.12	novel	4104	13	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_11	21.0108197235269	50	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	-43202896	True	NA	-14	True	NA	NA	NA	43203874	43196092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203611
transcript_16953.nnic	chr10	-	1586	12	NNC	ENSG00000198915.12	novel	4104	13	NA	NA	-89	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_11	19.662440597442	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCTTTGGCACTTACAAAG	NA	False	NA	-14	True	NA	NA	NA	43203908	43196092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_43196269_43196475_43196549_43196975_43197100_43198003_43198196_43198932_43199013_43199091_43199195_43199675_43199769_43200181_43200257_43200666_43200889_43201807_43201946_43203297_43203421_43203721
transcript_16963.known	chr10	+	779	9	FSM	ENSG00000150201.15	ENST00000476166.6	779	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGTAGTCTTGTGATCCA	43371625	False	NA	NA	False	ATTAAA	-20	NA	43371635	43376335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43371698_43372726_43372773_43373514_43373784_43374469_43374503_43374612_43374640_43375498_43375574_43375694_43375735_43376031_43376070_43376146
transcript_16968.known	chr10	-	2670	4	FSM	ENSG00000169813.17	ENST00000356053.7	2670	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_3	1049.60638124754	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43408863	False	NA	-1	True	TATAAA	-19	NA	43408882	43385616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43408726
transcript_16969.known	chr10	-	2186	4	FSM	ENSG00000169813.17	ENST00000337970.7	2186	4	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	1017.09531947054	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGGCACAGATTACTCA	-43391776	True	NA	-32	True	AATAAA	-14	NA	43409166	43386021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409089
transcript_16970.known	chr10	-	2569	4	FSM	ENSG00000169813.17	ENST00000682386.1	2569	4	0	0	0	0	multi-exon	FALSE	canonical	3	842	junction_3	681.236294459484	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTGGTCACGCTCCTG	-43391796	True	NA	-2	True	TATAAA	-18	NA	43409186	43385617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43409130
transcript_16982.known	chr10	-	2617	4	FSM	ENSG00000169813.17	ENST00000357065.8	2617	4	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	946.893986791669	1062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGTCACGCTCCTGA	-43407800	False	17390	-1	True	TATAAA	-19	NA	43407819	43385616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43407716
transcript_16983.known	chr10	-	715	3	FSM	ENSG00000169813.17	ENST00000498176.1	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	2246	junction_2	39.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGAGGTGTTCAAGT	-43396805	False	NA	42	True	AAAAAG	-23	NA	43396817	43387642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455
transcript_16984.known	chr10	-	636	4	FSM	ENSG00000169813.17	ENST00000477108.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_3	975.162322670208	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGTCCCAACAGTGCCG	-43397266	False	NA	96	True	NA	NA	NA	43397278	43387588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43387937_43394629_43394689_43396455_43396591_43397184
transcript_16985.known	chr10	+	760	2	FSM	ENSG00000230555.2	ENST00000442526.2	760	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGTGGT	43420586	False	NA	NA	False	NA	NA	NA	43420737	43422100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43421067_43421669
transcript_16986.nnic	chr10	+	751	2	NIC	ENSG00000243660.12	novel	568	4	NA	NA	-60	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTTGATGTACTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	43436780	43454660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_43436936_43454064
transcript_16987.nnic	chr10	+	849	2	NIC	ENSG00000243660.12	novel	583	2	NA	NA	30	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTTGATGTACTTATG	43436836	False	NA	NA	False	AATAAA	-21	NA	43436902	43454660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_43437156_43454064
transcript_16988.known	chr10	+	583	2	FSM	ENSG00000243660.12	ENST00000490208.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATGTTGTTGAAAGAATA	43437033	True	NA	NA	False	NA	NA	NA	43437147	43454532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43437263_43454064
transcript_1699.known	chr1	+	905	5	FSM	ENSG00000175279.22	ENST00000309048.8	905	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	32.104322138927	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCTGGTTACTAATGT	10428163	True	NA	23	True	AATAAA	-15	NA	10430432	10442808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_16991.known	chr10	-	2069	4	FSM	ENSG00000196793.14	ENST00000374446.7	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	13.490737563232	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGCCTTGTGTTTTTC	-43572566	True	NA	0	True	NA	NA	NA	43574616	43556343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43558172_43567898_43568022_43573636_43573678_43574539
transcript_16992.known	chr10	-	2027	3	FSM	ENSG00000196793.14	ENST00000426961.1	2027	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	10	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTGCCTTGTGTTT	-43572568	True	NA	-3	True	NA	NA	NA	43574618	43556346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43558172_43567898_43568022_43574539
transcript_16995.known	chr10	-	701	2	FSM	ENSG00000196793.14	ENST00000491188.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGGAAAATACTTAACACCA	-43572547	True	NA	NA	False	NA	NA	NA	43574597	43557528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43558172_43574539
transcript_16999.known	chr10	+	2024	5	FSM	ENSG00000198298.13	ENST00000361807.8	2024	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.8909587933665	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	43604724	True	NA	3	True	AATAAA	-18	NA	43606437	43617904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_43606547_43606996_43607075_43608613_43608741_43609254_43609351_43616290
transcript_17.known	ERCC-00040	+	728	1	FSM	ERCC-00040A	DQ883661	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00040_+_0_700
transcript_17004.nnic	chr10	+	1391	4	NIC	ENSG00000198298.13	novel	2024	5	NA	NA	-15	-539	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.4276973520408	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGTGTGGCAAATTGTGC	43604690	True	NA	11	True	AATAAA	-20	NA	43606403	43617364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_43606547_43606996_43607075_43609254_43609351_43616290
transcript_17005.nnic	chr10	+	1931	4	NIC	ENSG00000198298.13	novel	2024	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32.4276973520408	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATCTCTCTCTCTCTCTC	43604690	True	NA	3	True	AATAAA	-18	NA	43606403	43617904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_43606547_43606996_43607075_43609254_43609351_43616290
transcript_17017.known	chr10	-	1201	3	FSM	ENSG00000169740.14	ENST00000395797.1	1201	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	53.5	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGTTTTATAATTTCT	-43646063	False	NA	-13	True	AATAAA	-23	NA	43648704	43643859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43644802_43646063_43646203_43648584
transcript_17019.known	chr10	-	1159	3	FSM	ENSG00000169740.14	ENST00000374433.7	1159	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	28.5	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTATGTTTTATAATTT	-43646240	True	NA	-15	True	AATAAA	-21	NA	43648881	43643861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_43644802_43646063_43646203_43648801
transcript_1702.known	chr1	+	1469	5	FSM	ENSG00000251503.8	ENST00000400900.6	1469	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	102.535359754574	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTTCATGGATTATAGC	NA	False	NA	NA	False	NA	NA	NA	10430101	10452153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10440346_10440414_10451376
transcript_17020.known	chr10	+	1110	3	FSM	ENSG00000277288.5	ENST00000649743.1	1110	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACATGAGGCTTGGGCTT	NA	False	NA	NA	False	NA	NA	NA	44292749	44294649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_44292934_44293300_44293490_44293912
transcript_17021.known	chr10	-	1126	3	FSM	ENSG00000229116.3	ENST00000624407.2	1126	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAAGATTCATTTCTGTT	NA	False	NA	NA	False	AGTAAA	-13	NA	44293457	44282488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44283289_44292594_44292735_44293271
transcript_17022.known	chr10	-	1052	4	FSM	ENSG00000107562.17	ENST00000395794.2	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	85.0463925683441	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGCAATAAAATGCTAATT	-44378206	True	NA	-43	True	ACTAAA	-28	NA	44385049	44377163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44377906_44378636_44378724_44380762_44380881_44384944
transcript_17023.known	chr10	-	1857	3	FSM	ENSG00000107562.17	ENST00000343575.11	1928	3	5	66	0	31	multi-exon	FALSE	canonical	3	195	junction_2	13	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACGTCCTACTGTATGTG	-44378249	True	NA	-12	True	AATAAA	-21	NA	44385092	44377132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44378724_44380762_44380881_44384944
transcript_17024.known	chr10	-	3532	4	FSM	ENSG00000107562.17	ENST00000374429.6	3532	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	73.368173541999	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCAACAGTTTGAAATT	-44378249	True	NA	-29	True	AATAAA	-19	NA	44385092	44370164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_44373344_44378636_44378724_44380762_44380881_44384944
transcript_17026.known	chr10	+	3631	11	FSM	ENSG00000107551.21	ENST00000340258.10	3631	11	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_10	12.517587627015	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCTATGGGAGAGTGTT	44958539	True	NA	NA	False	AATAAA	-22	NA	44959801	44995891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_44959867_44970164_44970265_44971772_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_17034.known	chr10	+	4350	10	FSM	ENSG00000107551.21	ENST00000489171.5	4350	10	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_9	12.8840987267251	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGAAGAAGTGAGAACCA	NA	False	NA	11	True	AATAAA	-15	NA	44959406	44994707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_44959867_44970164_44971849_44982520_44982664_44984021_44984114_44984812_44984971_44989273_44989376_44989669_44989722_44990947_44991070_44991904_44992003_44993268
transcript_17036.known	chr10	-	3078	2	FSM	ENSG00000165511.6	ENST00000625168.1	3078	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTGTGAACCGCTCTTG	-45000601	True	NA	0	True	AATAAA	-21	NA	45000888	44997697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_45000417_45000529
transcript_17043.known	chr10	-	396	1	FSM	ENSG00000228462.1	ENST00000455650.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAGAACAAACCATGCTGG	NA	False	NA	-57	True	NA	NA	NA	45073541	45073145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_45073100_45073500
transcript_17044.known	chr10	+	2103	2	FSM	ENSG00000165512.5	ENST00000298299.4	2103	2	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_1	0	2086	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACCTTCTGTTTATTTTTC	44992889	True	NA	20	True	AATAAA	-23	NA	45000922	45005326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_45000979_45003279
transcript_17045.known	chr10	+	2519	14	FSM	ENSG00000012779.12	ENST00000374391.7	2519	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.41940165706044	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTTGTTCCATGTGTT	NA	False	NA	6	True	AATAAA	-16	NA	45374215	45446117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_45374430_45382482_45382682_45395854_45395937_45412190_45412314_45424040_45424148_45424959_45425133_45428617_45428765_45440429_45440634_45441343_45441431_45443037_45443217_45443415_45443538_45443727_45443829_45444115_45444287_45445507
transcript_17049.known	chr10	-	5272	7	FSM	ENSG00000165406.16	ENST00000319836.7	5272	7	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_6	15.2059929706094	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGGAGTTTTGCCATGA	-45594619	True	NA	-9	True	AATAAA	-11	NA	45594906	45454592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_45458544_45459119_45459268_45461230_45461412_45464238_45464328_45489366_45489418_45533109_45533290_45594234
transcript_1706.known	chr1	+	914	5	FSM	ENSG00000175279.22	ENST00000477755.1	914	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	69.9405997972565	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGTCAGAGGATGGAAGC	10430051	False	NA	19	True	AAGAAA	-2	NA	10430782	10442334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10431402_10433841_10433966_10434656_10434691_10440346_10440414_10442264
transcript_17064.nic	chr10	+	1363	3	ISM	ENSG00000172661.20	ENST00000537517.6	4040	28	-28	62632	8	-14955	5prime_fragment	FALSE	canonical	3	200	junction_1	22.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGATCTCTTTGCCAGT	45724335	True	NA	NA	False	AATAAA	-17	NA	45727207	45729988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_45727321_45727416_45727540_45728861
transcript_17065.known	chr10	-	956	1	FSM	ENSG00000237840.6	ENST00000608637.1	956	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAGCTTAAGTGACTTAA	NA	False	NA	NA	False	ATTAAA	-18	NA	45727231	45726275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_45726300_45727200
transcript_17077.known	chr10	+	1190	7	FSM	ENSG00000265354.4	ENST00000580018.4	1190	7	0	0	0	0	multi-exon	FALSE	canonical	3	1496	junction_5	155.644894979994	11248	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGGTTGTCTCAATTT	45950040	True	NA	48	True	AATAAA	-41	NA	45972488	46003742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_45972731_45975453_45975513_45982522_45982617_45982845_45982931_45985382_45985442_45988736_45988848_46003202
transcript_17078.known	chr10	-	3489	10	FSM	ENSG00000266412.6	ENST00000585132.5	3489	10	0	0	0	0	multi-exon	TRUE	canonical	3	132	junction_9	127.27378867603	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46014827	False	8628	0	True	ATTAAA	-16	NA	46023455	46005087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46023329
transcript_17080.known	chr10	-	3461	10	FSM	ENSG00000266412.6	ENST00000581486.6	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_9	44.8778864404065	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGCGTGTTATTTTTA	-46021995	True	NA	0	True	ATTAAA	-16	NA	46030623	46005087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46006598_46009410_46009552_46010222_46011207_46012882_46013027_46013549_46013640_46014443_46014553_46014853_46014943_46015125_46015267_46016539_46016695_46030525
transcript_17101.nnic	chr10	-	629	7	NIC	ENSG00000265366.6	novel	606	7	NA	NA	-79	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_6	7.28964257620968	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGATTAATTTGGTAAAGAA	-46786826	False	NA	NA	False	AATAAA	-15	NA	46786849	46759018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_46759161_46768208_46768293_46770738_46770803_46772428_46772485_46776752_46776834_46778656_46778717_46786707
transcript_17103.known	chr10	-	486	6	FSM	ENSG00000265366.6	ENST00000631118.2	486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	7.67854152818099	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGATTAATTTGGTAA	-46786747	False	NA	NA	False	AATAAA	-11	NA	46786770	46759022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_46759161_46768208_46768293_46770738_46770803_46772428_46772485_46776752_46776834_46786707
transcript_17105.nnic	chr10	+	706	5	NNC	ENSG00000280913.2	novel	1104	4	NA	NA	-49	1054	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGATCTTTCCATTGATGAGA	NA	False	NA	NA	False	ATTAAA	-15	NA	46756941	46760794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_46757151_46758077_46758215_46758833_46758954_46759053_46759201_46760701
transcript_17106.nnic	chr10	+	1046	5	NNC	ENSG00000204177.11	novel	2391	6	NA	NA	-53	-3533	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	35.2942984063999	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATTGGTCTTATCTG	NA	False	NA	NA	False	NA	NA	NA	46786620	46793939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961_46791042_46793647
transcript_17110.nic	chr10	+	1626	4	ISM	ENSG00000204177.11	ENST00000690404.1	2391	6	-395	5735	-229	-5735	5prime_fragment	TRUE	canonical	0	0	junction_1	35.2230984819148	97	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGGCCAGGCA	NA	False	NA	NA	False	NA	NA	NA	46786444	46791737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_46786901_46788396_46788601_46789496_46789687_46790961
transcript_17112.known	chr10	+	3041	11	FSM	ENSG00000204179.11	ENST00000374339.5	3041	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	4.96386945839634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911262	True	NA	NA	False	AATAAA	-15	NA	46911427	47002322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_46911502_46932376_46932534_46940622_46940718_46943917_46944016_46946562_46946676_46964985_46965138_46967956_46968048_46984229_46984565_46987339_46987556_46999911_46999975_47000675
transcript_17114.known	chr10	+	2779	9	FSM	ENSG00000204179.11	ENST00000395721.6	2779	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.3619026473818	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911272	True	NA	NA	False	AATAAA	-15	NA	46911437	47002322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_46911502_46943917_46944016_46946562_46946676_46964985_46965138_46967956_46968048_46984229_46984565_46987339_46987556_46999911_46999975_47000675
transcript_17117.known	chr10	+	2226	7	FSM	ENSG00000204179.11	ENST00000395725.7	2226	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.01386965216377	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCCTGAAGTATTTTTA	46911272	True	NA	NA	False	AATAAA	-13	NA	46911437	47002320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_46911502_46943917_46944016_46946562_46946676_46964985_46965138_46967956_46968048_46999911_46999975_47000675
transcript_17120.known	chr10	+	1995	5	FSM	ENSG00000204179.11	ENST00000395722.7	1995	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.13901457890434	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911262	True	NA	NA	False	AATAAA	-15	NA	46911427	47002322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_46911502_46943917_46944016_46946562_46946676_46999911_46999975_47000675
transcript_17122.known	chr10	+	1929	4	FSM	ENSG00000204179.11	ENST00000374342.6	1929	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.84754619472471	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTGAAGTATTTTTATT	46911230	True	NA	NA	False	AATAAA	-15	NA	46911395	47002322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_46911502_46946562_46946676_46999911_46999975_47000675
transcript_17124.known	chr10	-	3516	2	FSM	ENSG00000265763.4	ENST00000585316.3	3516	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTGAGAAGCTGGG	-47383878	True	NA	-12	True	AATAAA	-15	NA	47384293	47365495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_47368938_47384219
transcript_17126.nic	chr10	-	1354	4	ISM	ENSG00000254929.6	ENST00000605970.5	1594	12	-23	30792	8	-25250	5prime_fragment	FALSE	canonical	2	17	junction_3	44.9518260659861	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGGCCAGACACAGT	-47551164	True	NA	NA	False	AAAAAG	-9	NA	47553506	47548607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_47549385_47550657_47550848_47551743_47551953_47553328
transcript_1713.known	chr1	+	626	4	FSM	ENSG00000251503.8	ENST00000470413.6	626	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	101.929169306708	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATCTTTCCTCTCCTCCT	10428114	True	NA	7	True	AATAAA	-16	NA	10430383	10451659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10430569_10433841_10433966_10434656_10434691_10451376
transcript_17136.nnic	chr10	+	2246	8	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5632	782	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	6.56832224718437	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	47695105	True	NA	NA	False	AATAAA	-17	NA	47695338	47731218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47715650_47715858_47719832_47720062_47726840_47726957_47730236
transcript_17139.nnic	chr10	+	2039	7	NNC	ENSG00000189014.7	novel	2712	8	NA	NA	5632	782	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	9.41629792788369	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACCCTGTG	47695105	True	NA	NA	False	AATAAA	-17	NA	47695338	47731218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_47695614_47696402_47696511_47710220_47710415_47710581_47710717_47719832_47720062_47726840_47726957_47730236
transcript_17147.known	chr10	+	5844	12	FSM	ENSG00000107643.17	ENST00000395611.7	5844	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	22.5318874134686	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTAAGAGTTTTTTCATT	48302208	True	NA	19	True	AATAAA	-28	NA	48306638	48439357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029_48410169_48420154_48420321_48424513_48424586_48425887_48426071_48426379_48426505_48427079_48427144_48431192_48431271_48434883
transcript_17149.nic	chr10	+	808	5	ISM	ENSG00000107643.17	ENST00000374189.6	5809	12	-4	29032	-4	0	5prime_fragment	FALSE	canonical	3	25	junction_1	17.3853386507137	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCCATGTTTCTTAAGCA	48302242	True	NA	NA	False	ATTAAA	-31	NA	48306672	48410328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_48306822_48401611_48401783_48404851_48404982_48409878_48409938_48410029
transcript_17151.known	chr10	-	1951	2	FSM	ENSG00000128805.15	ENST00000477708.6	1951	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCCTTGTTACCTGGCT	-48451614	False	NA	-12	True	ATTAAA	-16	NA	48451627	48446035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_48446620_48450260
transcript_17152.nic	chr10	-	825	2	ISM	ENSG00000128805.15	ENST00000491108.1	912	3	-204	8023	-71	-4	5prime_fragment	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGATAGAGAATGTCCTT	NA	False	NA	NA	False	AATGAA	-16	NA	48605159	48582724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_48583153_48604762
transcript_17153.known	chr10	-	2170	3	FSM	ENSG00000165633.13	ENST00000298454.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAACAAAAAACA	-49115445	True	NA	NA	False	NA	NA	NA	49115509	49102171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49103861_49107593_49107996_49115430
transcript_17154.known	chr10	-	3495	6	FSM	ENSG00000225830.16	ENST00000447839.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.40587727318528	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTCCTTGAATTTTT	-49538294	True	NA	NA	False	AATAAA	-19	NA	49539121	49515197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49517122_49524032_49524778_49528416_49528526_49530719_49530841_49532542_49532979_49538961
transcript_17155.known	chr10	-	3706	23	FSM	ENSG00000197444.10	ENST00000374103.9	3706	23	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_20	18.399436301103	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTTTTCATTTCATG	-49760637	True	NA	0	True	AATAAA	-18	NA	49762323	49734640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49735352_49736022_49736178_49736356_49736521_49737785_49737859_49737946_49738073_49738190_49738263_49739660_49739840_49740709_49740838_49742827_49742979_49743993_49744123_49744649_49744753_49745343_49745497_49745797_49745978_49746749_49746879_49747028_49747209_49749725_49749817_49750838_49750986_49751826_49751982_49752132_49752249_49752637_49752741_49756775_49756947_49758388_49758594_49762238
transcript_17158.known	chr10	-	4294	18	FSM	ENSG00000227345.9	ENST00000616448.2	4294	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	72.6856530014633	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGTTTAGGCATTATTTG	-49936894	True	NA	-12	True	AATAAA	-21	NA	49942027	49818278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_49819495_49820164_49820294_49832802_49832909_49841949_49842059_49843553_49843633_49857305_49857454_49861587_49861664_49865320_49865382_49869475_49869556_49879672_49879831_49885202_49885296_49915916_49915992_49922335_49922420_49922546_49922670_49932099_49932284_49933176_49934164_49935075_49935143_49941508
transcript_17173.known	chr10	+	2623	8	FSM	ENSG00000204152.14	ENST00000478381.5	2623	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	39.311420161348	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938120	True	NA	NA	False	ATTAAA	-19	NA	49942048	49974850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_49942301_49943234_49943359_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_17176.known	chr10	+	2495	7	FSM	ENSG00000204152.14	ENST00000651259.3	2495	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	17.8831081066898	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTCTATGTTGGTTAAT	49938124	True	NA	NA	False	ATTAAA	-19	NA	49942052	49974850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_49942301_49945031_49945091_49952125_49952220_49952448_49952534_49955001_49955061_49958369_49958481_49973011
transcript_17184.known	chr10	+	4642	31	FSM	ENSG00000099290.17	ENST00000282633.10	4642	31	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	45.6627735566828	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTACTTACTGT	50065570	True	NA	10	True	AATAAA	-23	NA	50067953	50133509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50068009_50068104_50068228_50069546_50069712_50078674_50078738_50080757_50080932_50084071_50084166_50085496_50085559_50087274_50087323_50090775_50090887_50091430_50091519_50092161_50092234_50093267_50093387_50093859_50093918_50095147_50095208_50095598_50095779_50097674_50097803_50099977_50100065_50104041_50104144_50106333_50106466_50110100_50110271_50113894_50113998_50117905_50118059_50119586_50119770_50125112_50125242_50125368_50125450_50126056_50126180_50127159_50127223_50127582_50127796_50129418_50130040_50130900_50131079_50132805
transcript_17186.known	chr10	-	3717	11	FSM	ENSG00000198964.14	ENST00000361781.7	3717	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	14.2632394637403	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTTATTTCTACTGTG	-50621222	True	NA	NA	False	AATAAA	-20	NA	50623956	50305599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_50307322_50307981_50308149_50311261_50311416_50327204_50327323_50343491_50344346_50433475_50433557_50460672_50460815_50466889_50466933_50519830_50519922_50590152_50590248_50623706
transcript_17189.known	chr10	+	5199	7	FSM	ENSG00000204147.11	ENST00000643505.1	5199	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	65.9772688128267	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTATAACCAAAAACTTAC	50739226	True	NA	NA	False	AATAAA	-8	NA	50739935	50759240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50739984_50742914_50743011_50743672_50743742_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_17193.known	chr10	+	5145	6	FSM	ENSG00000204147.11	ENST00000647317.2	5145	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	43.9108187124768	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCTCGACTCCCAGTTT	50739226	True	NA	NA	False	AATAAA	-23	NA	50739935	50759255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50739984_50742914_50743011_50745127_50745275_50749342_50749403_50752467_50752557_50754550
transcript_17198.known	chr10	+	632	6	FSM	ENSG00000204147.11	ENST00000374006.1	632	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	53.4280825034925	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAACTAGTGAACTACCA	50739238	True	NA	NA	False	AATGAA	-1	NA	50739947	50754809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_50740003_50742914_50743011_50745201_50745275_50749342_50749403_50752467_50752557_50754550
transcript_17206.known	chr10	-	1333	2	FSM	ENSG00000287221.1	ENST00000671395.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATTATTACCCTATTTG	-50739401	False	NA	NA	False	AAAAAG	-19	NA	50739434	50736077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_50736763_50738786
transcript_17209.known	chr10	+	1297	8	FSM	ENSG00000185532.20	ENST00000645324.1	1297	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9.25599640167146	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	51074282	False	NA	22	True	AATAAA	-38	NA	51074303	52062862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_51074902_51153163_51153331_51467722_51467837_51804584_51804691_51907506_51907571_52054483_52054562_52062536_52062632_52062787
transcript_17212.nnic	chr10	+	755	4	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-10142	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_3	6.64997911442	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	52036580	True	NA	22	True	AATAAA	-38	NA	52036605	52062862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_52037113_52054483_52054562_52062536_52062632_52062787
transcript_17213.nnic	chr10	+	374	4	NNC	ENSG00000185532.20	novel	6957	18	NA	NA	-8984	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.87400787401181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTTTCAGGTTTGTG	52037743	False	NA	22	True	AATAAA	-38	NA	52037763	52062862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_52037890_52054483_52054562_52062536_52062632_52062787
transcript_17217.nnic	chr10	+	720	3	NNC	ENSG00000185532.20	novel	1549	6	NA	NA	-242163	45178	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCATTTTGTGTATATTA	NA	False	NA	NA	False	AATAAA	-22	NA	51804584	51956383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_51804691_51907506_51907571_51955833
transcript_17218.known	chr10	+	478	2	FSM	ENSG00000185532.20	ENST00000645790.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAGAAAAAAAAGGAAGAT	NA	False	NA	NA	False	NA	NA	NA	51467722	51568789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_51467837_51568425
transcript_17219.nnic	chr10	-	978	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6318	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	-51074748	True	NA	-1	True	AATAAA	-17	NA	51074871	51062578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_51062931_51068484_51068553_51074313
transcript_17220.nnic	chr10	-	949	3	NNC	ENSG00000223502.1	novel	421	2	NA	NA	-6318	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	-51074748	True	NA	-1	True	AATAAA	-17	NA	51074871	51062578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_51062931_51068484_51068553_51074342
transcript_17222.known	chr10	-	421	2	FSM	ENSG00000223502.1	ENST00000343087.4	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTATTGATTTCTTCTT	-51068430	False	NA	-1	True	AATAAA	-17	NA	51068553	51062578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_51062931_51068484
transcript_17223.known	chr10	-	4110	1	FSM	ENSG00000177613.9	ENST00000331173.6	4110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	157	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAGTATCTGATATGTTT	-51694190	True	NA	-4	True	AATAAA	-18	NA	51699595	51695485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_51695500_51699600
transcript_17232.nnic	chr10	-	1001	2	NNC	ENSG00000150275.20	novel	754	5	NA	NA	1838	47	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTATATTTTATTGATT	-53808802	True	NA	NA	False	AATAAA	-22	NA	53808826	53806275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_53807131_53808680
transcript_17240.known	chr10	-	1857	9	FSM	ENSG00000122952.17	ENST00000373944.8	1857	9	0	0	0	0	multi-exon	TRUE	canonical	3	666	junction_3	104.519062256605	1555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGATGTCATCTTTTTTA	-56347010	True	NA	15	True	AATAAA	-42	NA	56361259	56357226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_17241.known	chr10	-	1851	8	FSM	ENSG00000122952.17	ENST00000395405.5	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_2	111.725976735722	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56347024	True	NA	-6	True	AATAAA	-20	NA	56361273	56357437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56359854_56360017_56360142_56360292_56360384_56361195
transcript_17242.known	chr10	-	1961	7	FSM	ENSG00000122952.17	ENST00000494312.5	1961	7	0	0	0	0	multi-exon	FALSE	canonical	3	666	junction_3	115.060370627288	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGACTTCCTTTATTTT	-56347010	True	NA	-6	True	AATAAA	-20	NA	56361259	56357437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358725_56358804_56358948_56359475_56359533_56359686_56360384_56361195
transcript_17243.known	chr10	-	1621	8	FSM	ENSG00000122952.17	ENST00000489649.6	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	252.008503257897	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTGTTTTCTCAAATA	-56347016	True	NA	-47	True	NA	NA	NA	56361265	56357478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_56358186_56358376_56358460_56358555_56358688_56358908_56358948_56359475_56359533_56359686_56359854_56360017_56360384_56361195
transcript_17245.known	chr10	+	1068	2	FSM	ENSG00000287016.1	ENST00000655098.1	1068	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATAGTTTCTCTGAAGT	56361239	True	NA	5	True	AATAAA	-16	NA	56361478	56364714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_56361857_56364024
transcript_17247.known	chr10	+	698	5	FSM	ENSG00000122873.12	ENST00000464703.5	698	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	396.571872426676	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTCATGAAGAATGTCTTA	58261455	True	NA	92	True	TTTAAA	-2	NA	58269177	58288348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58269305_58276117_58276213_58277116_58277323_58287560_58287758_58288275
transcript_17257.known	chr10	+	2375	3	FSM	ENSG00000122873.12	ENST00000333926.6	2375	3	0	0	0	0	multi-exon	FALSE	canonical	3	934	junction_2	21.5	1783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTGGTTAGGTTAAT	58261439	True	NA	NA	False	ATTAAA	-34	NA	58269161	58289586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58269305_58277116_58277323_58287560
transcript_17259.known	chr10	+	2623	7	FSM	ENSG00000072401.15	ENST00000373910.9	2623	7	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_5	25.6883025692413	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAACTTGTTTGCCTTTGC	58326390	True	NA	10	True	ATTAAA	-15	NA	58335005	58370748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58335226_58361337_58361402_58361494_58361527_58363608_58363687_58364770_58364877_58367922_58368017_58368719
transcript_17261.known	chr10	+	5025	7	FSM	ENSG00000108064.11	ENST00000487519.6	5025	7	0	0	0	0	multi-exon	FALSE	canonical	3	323	junction_4	58.4534477644865	1597	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCATTTATATATTGGTT	58372925	True	NA	21	True	AATAAA	-23	NA	58385409	58399220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_58385649_58386219_58386339_58388189_58388261_58388669_58388820_58390764_58390861_58394357_58394415_58394927
transcript_17262.known	chr10	-	3328	14	FSM	ENSG00000148541.13	ENST00000618804.5	3328	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	3.19948220662853	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATTATGTTGAAACACAG	-59362423	True	NA	NA	False	AATAAA	-17	NA	59362549	59246132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_59247738_59251574_59251677_59252798_59252999_59254347_59254444_59262433_59262646_59264084_59264167_59268552_59268692_59269898_59270110_59283362_59283448_59302800_59302865_59323987_59324107_59352269_59352475_59355886_59355944_59362398
transcript_17263.known	chr10	-	3811	21	FSM	ENSG00000151150.22	ENST00000355288.6	3811	21	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_20	21.2800375939518	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAACCACCCACAT	-60141005	False	NA	14	True	AAAAAG	-5	NA	60141016	60029689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60140351
transcript_17267.known	chr10	-	493	3	FSM	ENSG00000151150.22	ENST00000486349.2	493	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	33	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTTGTTTATTAAAGTT	-60140504	False	NA	NA	False	ATTAAA	-23	NA	60140515	60138516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60138722_60138963_60139088_60140351
transcript_17270.known	chr10	-	7202	44	FSM	ENSG00000151150.22	ENST00000373827.6	7202	44	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_20	34.0692673985052	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTCTACAGTCTCCT	-60731008	True	NA	-2	True	AATAAA	-22	NA	60733490	60028400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_60029827_60042671_60042760_60055657_60056037_60059339_60059431_60059697_60060007_60063110_60063255_60064156_60064289_60067934_60068010_60080536_60080619_60082614_60082738_60083491_60083618_60084601_60084831_60085156_60085254_60086676_60086885_60088146_60088359_60105904_60106060_60108829_60109055_60114224_60114332_60134270_60134374_60138963_60139088_60166590_60166654_60166823_60166897_60172307_60172404_60172899_60172999_60173087_60173187_60181328_60181428_60186714_60186913_60196144_60196244_60196526_60196626_60198339_60198538_60200128_60200228_60203001_60203101_60205791_60205891_60208035_60208234_60213411_60213511_60234687_60234787_60261858_60261958_60263834_60264021_60270130_60270230_60278773_60278873_60279049_60279149_60279537_60279640_60615185_60615225_60733262
transcript_17273.nnic	chr10	+	548	3	NNC	ENSG00000254271.1	novel	434	2	NA	NA	-818	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGAAATATGGGGCATTA	60733506	False	NA	NA	False	AATAAA	-16	NA	60733523	60741828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_60733639_60734342_60734429_60741481
transcript_17287.known	chr10	+	1889	8	FSM	ENSG00000170312.17	ENST00000395284.8	1889	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	479.76775844237	8892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCTCATTGTGATTCTT	60763042	True	NA	NA	False	ATTAAA	-16	NA	60778477	60794852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792147_60792290_60793876
transcript_17288.known	chr10	+	1733	7	FSM	ENSG00000170312.17	ENST00000316629.8	1733	7	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_4	458.13498738545	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763018	True	NA	NA	False	ATTAAA	-7	NA	60778453	60794843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60791889_60792054_60792147_60792290_60793876
transcript_17289.known	chr10	+	1948	8	FSM	ENSG00000170312.17	ENST00000448257.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	428.650659342899	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTAAACTGTTTAACAA	60763057	True	NA	NA	False	AAAAAG	-37	NA	60778492	60794828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_60778669_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788235_60791893_60792054_60792147_60792290_60793876
transcript_17290.known	chr10	+	1884	9	NNC	ENSG00000170312.17	novel	1889	8	NA	NA	3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	657.148908163135	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAATAATGCTGCTCATT	60763060	True	NA	NA	False	ATTAAA	-7	NA	60778495	60794843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_60778571_60780140_60780203_60784704_60784862_60785663_60785788_60788059_60788231_60791889_60792054_60792122_60792130_60792132_60792290_60793876
transcript_17295.known	chr10	-	5087	6	FSM	ENSG00000196932.12	ENST00000399298.8	5087	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3.49857113690718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAATGTGGATTTTTGCT	-61453365	False	NA	-4	True	ATTAAA	-20	NA	61453381	61406641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_61410747_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_17297.nic	chr10	-	1146	6	NIC	ENSG00000196932.12	novel	2520	7	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	4.67332857821917	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTTGCAAGAAGTAATCT	-61453423	False	16	NA	False	AATAAA	-16	NA	61453439	61412892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_61412999_61413458_61413536_61428925_61429147_61431218_61431333_61436169_61436249_61452890
transcript_173.known	SIRV2	-	2051	11	FSM	SIRV2A	SIRV201	2051	11	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_6	1137.82325516752	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATCCCAACGTGGCATGCG	NA	False	NA	NA	False	NA	NA	NA	5907	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_1662_1741_1854_1973_2065_2674_2803_2881_3011_3105_3375_3665_3826_3966_4095_4338_4480_4687_4801_5788
transcript_17301.nnic	chr10	-	1604	2	NNC	ENSG00000196932.12	novel	5087	6	NA	NA	-58	-37875	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCACCTTTATTTTGGAA	-61453423	False	16	NA	False	AATAAA	-35	NA	61453439	61450767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_61451823_61452890
transcript_17303.nic	chr10	+	1438	9	ISM	ENSG00000150347.17	ENST00000279873.12	7492	10	-62	11077	-47	-7197	5prime_fragment	FALSE	canonical	0	0	junction_4	1.08972473588517	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGCCCCAAAGCCCCA	NA	False	NA	NA	False	AAGAAA	-7	NA	61901636	62085867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_61901731_61902158_61902414_61940182_61940409_62000090_62000322_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701
transcript_17305.known	chr10	+	3141	7	FSM	ENSG00000150347.17	ENST00000309334.5	3141	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGAGCTTCACTCCTT	NA	False	NA	NA	False	NA	NA	NA	62049210	62093064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_62049484_62050887_62051001_62057116_62057319_62059242_62059296_62069699_62069798_62085701_62085901_62090861
transcript_17313.known	chr10	-	6886	12	FSM	ENSG00000182010.11	ENST00000373789.8	6886	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	60.3908755627841	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTAGCAATTTTATA	-62268832	True	NA	2	True	AATAAA	-13	NA	62268844	62193085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_62198444_62199753_62199862_62204856_62205023_62217117_62217250_62218194_62218302_62223237_62223333_62236065_62236264_62239647_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_1732.known	chr1	+	584	3	FSM	ENSG00000175279.22	ENST00000462462.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	123	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAATAAAATAAAAAG	10431092	False	NA	-12	True	AATAGA	-5	NA	10431122	10442502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10431402_10440346_10440414_10442264
transcript_17320.known	chr10	-	2076	5	FSM	ENSG00000182010.11	ENST00000395260.3	2076	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	32.4114177412837	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGAAGTTATTCCTGGGA	-62264807	True	NA	NA	False	AATAAA	-12	NA	62268707	62238156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_62239766_62241141_62241196_62245998_62246058_62262624_62262822_62268550
transcript_17333.known	chr10	-	688	3	FSM	ENSG00000238280.2	ENST00000425290.1	688	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGATATTCAGAAAAGGC	NA	False	NA	NA	False	ATTAAA	-42	NA	62805887	62793561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_62793975_62794292_62794409_62805728
transcript_17338.known	chr10	+	1813	4	FSM	ENSG00000148572.16	ENST00000277746.11	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	477	junction_1	14.142135623731	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTTGTTGAACGTGGTT	63129961	True	NA	9	True	AATAAA	-15	NA	63133327	63155024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63133501_63146208_63146294_63152149_63152191_63153510
transcript_17341.known	chr10	+	1816	3	FSM	ENSG00000148572.16	ENST00000435510.6	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	248.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAACGTGGTTGATAGTT	63129880	True	NA	16	True	AATAAA	-22	NA	63133246	63155031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63133501_63152149_63152191_63153510
transcript_17345.nic	chr10	-	1822	6	NIC	ENSG00000171988.20	novel	8149	25	NA	NA	7	934	combination_of_known_junctions	FALSE	canonical	3	46	junction_4	40.5294954323391	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGACCAGAGCTGGGT	-63261909	True	NA	NA	False	AAAACA	-41	NA	63269246	63214489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_63215152_63215262_63215456_63215552_63215697_63217206_63217332_63264650_63264765_63268662
transcript_17346.known	chr10	-	734	6	FSM	ENSG00000171988.20	ENST00000469152.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.3696222587687	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACCAGCAATGAACTCCC	-63268860	False	953	-127	True	NA	NA	NA	63268875	63215423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_63215456_63215552_63215697_63217206_63217332_63219877_63219984_63264650_63264765_63268662
transcript_17350.nnic	chr10	-	1992	3	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-49	-155316	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCCAATTTTTA	-63465294	True	NA	NA	False	NA	NA	NA	63466026	63375192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_63376488_63380317_63380483_63465494
transcript_17353.nic	chr10	-	481	2	ISM	ENSG00000171988.20	ENST00000633035.1	499	4	9	160229	9	-160229	5prime_fragment	FALSE	canonical	3	42	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGGATGTGGTGGCACA	-63521816	False	NA	NA	False	AAAAAG	-37	NA	63521841	63380105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63380483_63521737
transcript_17354.known	chr10	+	891	1	FSM	ENSG00000234369.1	ENST00000414123.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	221	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGGTATATGTCTTCCA	NA	False	NA	NA	False	ATTAAA	-19	NA	63222154	63223045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63222200_63223000
transcript_17355.nnic	chr10	-	828	3	NNC	ENSG00000171988.20	novel	8758	26	NA	NA	-49	-156480	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATGAAGCTTTTCCCCT	-63465294	True	NA	NA	False	ATTAAA	-19	NA	63466026	63376356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_63376488_63380317_63380483_63465494
transcript_17357.nnic	chr10	-	1072	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-49	212718	-49	-160066	5prime_fragment	FALSE	canonical	3	19	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAATAAATGAAAATTTAAGA	-63465294	True	NA	NA	False	NA	NA	NA	63466026	63379942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63380483_63465494
transcript_17359.nnic	chr10	-	904	2	ISM	ENSG00000171988.20	ENST00000399262.7	8758	26	-49	212886	-49	-160234	5prime_fragment	FALSE	canonical	3	19	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATAGCTGGATGTGGTG	-63465294	True	NA	NA	False	AAAAAG	-32	NA	63466026	63380110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_63380483_63465494
transcript_17361.known	chr10	+	5172	8	FSM	ENSG00000165476.14	ENST00000373758.5	5172	8	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_5	35.8466119994168	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGAACGGCATTTTTTT	63518503	True	NA	NA	False	AATAAA	-18	NA	63521400	63625128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169_63599284_63610186_63610335_63619654_63619801_63620812
transcript_17363.nic	chr10	+	596	5	ISM	ENSG00000165476.14	ENST00000373758.5	5172	8	49	25762	49	-21456	5prime_fragment	FALSE	canonical	3	181	junction_4	23.466731770743	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGGCATTTTGCTATATT	63518552	True	NA	NA	False	AATAAA	-31	NA	63521449	63599366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_63521578_63566337_63566411_63594777_63594855_63598023_63598145_63599169
transcript_17367.known	chr10	+	1246	7	FSM	ENSG00000228065.12	ENST00000666779.1	1246	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	10.0898739117769	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTCTTTTTTACGCATT	65569632	True	NA	NA	False	ATTAAA	-41	NA	65570465	65698429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570546_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65689507_65689612_65698088
transcript_17369.known	chr10	+	1337	7	FSM	ENSG00000228065.12	ENST00000666619.1	1337	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	9.8770215933527	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACCATGTAATAGAGATAG	65569676	True	NA	NA	False	ATTAAA	-19	NA	65570509	65698407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65679351_65679413_65698102
transcript_17370.known	chr10	+	1701	7	FSM	ENSG00000228065.12	ENST00000671055.1	1701	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.22707369044427	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGAGAGTGAGATGGTG	65569693	True	NA	NA	False	AATAAA	-26	NA	65570526	65698726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65689502_65689612_65698088
transcript_17377.known	chr10	+	1319	4	FSM	ENSG00000228065.12	ENST00000657227.2	1320	4	1	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGATCCAAGTGGTGAAATC	65569679	True	NA	13	True	AATAAA	-26	NA	65570512	65586279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484
transcript_17382.known	chr10	+	2006	6	FSM	ENSG00000228065.12	ENST00000670657.1	2006	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	8.49941174435031	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGTATGCATGTGTGTT	65569686	True	NA	NA	False	AATAAA	-23	NA	65570519	65660839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65659794
transcript_17383.known	chr10	+	1380	7	FSM	ENSG00000228065.12	ENST00000598092.3	1380	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.4339811320566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTATGTCTTCATTTTTTC	65569688	True	NA	NA	False	AATAAA	-20	NA	65570521	65672549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_65570760_65571424_65571580_65572934_65573057_65585484_65585803_65615635_65615762_65670688_65670872_65672311
transcript_17387.known	chr10	-	2056	12	FSM	ENSG00000183230.18	ENST00000683272.1	2056	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.51606409147237	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTAGACTCTATCTCAAAA	NA	False	NA	NA	False	NA	NA	NA	67665652	66520285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_66520774_66621691_66621785_66766263_66766417_66775443_66775525_67180316_67180521_67219606_67219871_67521841_67521962_67539502_67539670_67606856_67607050_67647414_67647519_67648739_67648817_67665540
transcript_1739.known	chr1	+	1922	9	FSM	ENSG00000142655.13	ENST00000356607.9	1922	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	8.27552868401772	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471629	True	NA	10	True	AATAAA	-21	NA	10474949	10630758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_10475003_10495273_10495322_10536212_10536298_10599237_10599367_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_17393.known	chr10	-	1221	5	FSM	ENSG00000108176.15	ENST00000225171.7	1221	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3.83242742918897	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATGAATTTATAATTCAA	-67837956	True	NA	-18	True	AATAAA	-19	NA	67838188	67796668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67797211_67805582_67805788_67811523_67811664_67823313_67823393_67837933
transcript_17394.known	chr10	+	1222	1	FSM	ENSG00000272892.1	ENST00000610279.1	1222	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTGTTTGTTTGTTT	67849381	True	NA	NA	False	ACTAAA	-15	NA	67849524	67850746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_67849500_67850700
transcript_17395.known	chr10	+	4107	9	FSM	ENSG00000096717.12	ENST00000212015.11	4107	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_6	30.7771729533432	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGTTTAAGGTATATAAT	67873227	True	NA	48	True	ATTAAA	-31	NA	67884655	67918390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_67885152_67887416_67887534_67888881_67889124_67891401_67891555_67906789_67906938_67908045_67908126_67909255_67909443_67912473_67913032_67916264
transcript_17402.known	chr10	+	673	4	FSM	ENSG00000096717.12	ENST00000497639.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	154.389838468153	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTTTGATATTGAATATT	67885158	False	NA	NA	False	NA	NA	NA	67885180	67891496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_67885400_67887416_67887534_67888881_67889124_67891401
transcript_17404.known	chr10	-	4445	26	FSM	ENSG00000148634.16	ENST00000395198.7	4445	26	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_9	25.4704848795621	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCAGTGGTTCTCAT	-68072393	True	NA	-8	True	AATAAA	-21	NA	68075283	67921907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67959112_67959137_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_17405.known	chr10	-	4424	25	FSM	ENSG00000148634.16	ENST00000373700.9	4424	25	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_9	17.194152752866	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAGTGGTTCTCATATA	-68072393	True	NA	-5	True	AATAAA	-24	NA	68075283	67921904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_67923140_67925084_67925188_67932596_67932781_67936152_67936236_67939587_67939655_67940938_67941106_67954594_67954739_67954962_67955131_67956877_67956977_67966682_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_17409.nic	chr10	-	2335	16	ISM	ENSG00000148634.16	ENST00000412272.6	4211	24	-94	44708	-76	-1824	5prime_fragment	FALSE	canonical	3	68	junction_3	11.9925903049434	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGGTTTTGAAATGAGAA	NA	False	NA	-18	True	AATAAA	-14	NA	68075377	67966615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_67966803_67988662_67988836_67990210_67990401_67990903_67991016_67991139_67991200_67992198_67992324_67992605_67992683_68014025_68014187_68025545_68025677_68032777_68032870_68033964_68034187_68038092_68038170_68044403_68044564_68072882_68073187_68073656_68073687_68075143
transcript_17416.known	chr10	-	3385	4	FSM	ENSG00000148634.16	ENST00000492996.6	3385	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	43.058100283222	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGATTACTTGGCTTGC	-68072393	True	NA	-15	True	AATAAA	-18	NA	68075283	68067688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68070600_68072882_68073187_68073656_68073687_68075143
transcript_1742.nnic	chr1	+	1860	8	NIC	ENSG00000142655.13	novel	1922	9	NA	NA	-67	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_3	33.3894765286481	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGTGGCTCCCTG	10471562	True	NA	10	True	AATAAA	-21	NA	10474882	10630758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_10475003_10495273_10495322_10536212_10536298_10618331_10618418_10623018_10623122_10624339_10624438_10627271_10627364_10629530
transcript_17424.known	chr10	-	1519	1	FSM	ENSG00000179774.9	ENST00000373673.5	1519	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCTTGCCAGTTTCCTGA	-68232058	False	NA	NA	False	AATAAA	-26	NA	68232113	68230594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68230600_68232100
transcript_17430.known	chr10	-	2588	10	FSM	ENSG00000108187.16	ENST00000358769.7	2588	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.00308522992263	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATGCCTTAACTTACTG	-68332833	True	NA	NA	False	AATAAA	-17	NA	68332928	68282659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68284290_68285347_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306904_68332783
transcript_17439.known	chr10	-	1349	9	FSM	ENSG00000108187.16	ENST00000495025.2	1349	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.14578098794425	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGAGAGGTTATTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	68333049	68285080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68285411_68288482_68288662_68288930_68289020_68292009_68292040_68292128_68292239_68296265_68296365_68296885_68296986_68306760_68306907_68332783
transcript_17462.known	chr10	-	983	6	FSM	ENSG00000204130.14	ENST00000342616.4	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	4.31740662898458	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACTTCAAGATCGAACTA	-68406574	True	NA	NA	False	AATAAA	-41	NA	68407277	68393763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68394137_68394327_68394452_68396779_68396882_68401619_68401738_68404670_68404845_68407185
transcript_17465.known	chr10	+	2356	10	FSM	ENSG00000096746.18	ENST00000265866.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_1	341.210083361636	5088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGGCGTCTGTCCTAGAA	68304824	True	NA	30	True	AATAAA	-21	NA	68332063	68343193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338688_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_17466.known	chr10	+	1332	10	FSM	ENSG00000096746.18	ENST00000354695.5	1332	10	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_4	394.725815137296	7458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGATGTTGATACTTTTT	68304882	True	NA	29	True	AATAAA	-16	NA	68332121	68342272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332217_68337198_68337334_68337857_68337997_68338502_68338643_68339139_68339227_68339439_68339556_68341173_68341310_68341584_68341681_68341758_68341852_68341977
transcript_17467.known	chr10	+	752	6	FSM	ENSG00000096746.18	ENST00000480987.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_2	548.208135656522	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTAAAGATAAAAATAACAT	68304836	True	NA	NA	False	NA	NA	NA	68332075	68341287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68332236_68337198_68337334_68338502_68338643_68339139_68339227_68339439_68339556_68341173
transcript_17468.known	chr10	-	2657	12	FSM	ENSG00000204130.14	ENST00000399200.7	2657	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.9242319169453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGGCATACTACATGTT	-68406562	True	NA	NA	False	AATAAA	-19	NA	68407265	68377192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68378671_68379423_68379522_68381231_68381400_68383797_68383915_68384050_68384153_68386058_68386129_68393137_68393204_68394074_68394137_68394327_68394452_68401619_68401738_68404670_68404845_68407185
transcript_17472.known	chr10	-	4267	21	FSM	ENSG00000138346.15	ENST00000358410.8	4267	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.3624696542946	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAACTGTGTCAATTATT	-68467495	True	NA	-4	True	AATAAA	-18	NA	68471973	68414063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68415108_68416708_68416856_68419033_68419214_68419802_68419893_68422224_68422430_68422514_68422605_68422696_68422891_68430435_68430661_68431861_68431972_68432205_68432316_68432393_68432511_68437010_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_17475.nic	chr10	-	2204	10	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	138	21583	-10	282	internal_fragment	FALSE	canonical	3	173	junction_2	23.7008100085573	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATCATTAACCATTTTAA	-68467505	True	NA	NA	False	AATAAA	-26	NA	68471983	68436571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_68437242_68442916_68443112_68444920_68445084_68446295_68446414_68450027_68450248_68459103_68459236_68465666_68465813_68468122_68468307_68469980_68470164_68471790
transcript_17478.nic	chr10	-	1193	3	ISM	ENSG00000138346.15	ENST00000399179.6	3207	22	138	52501	-10	677	internal_fragment	FALSE	canonical	3	229	junction_1	3.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGCTTTTTATTTATT	-68467505	True	NA	NA	False	AATAAA	-16	NA	68471983	68467489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_68468307_68469980_68470164_68471790
transcript_17484.known	chr10	-	1779	2	FSM	ENSG00000122912.15	ENST00000439904.3	1779	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTACAGCTTGTGGAAAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	68480764	68477998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_68478804_68479790
transcript_17490.known	chr10	+	9612	12	FSM	ENSG00000138336.9	ENST00000373644.5	9612	12	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	44.4918044268495	930	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTCATCTAACATTATTT	68551953	True	NA	12	True	AATAAA	-32	NA	68560336	68694487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68560743_68572216_68574253_68600980_68601035_68644697_68647006_68651845_68651937_68652500_68652595_68667044_68667257_68672894_68673046_68681398_68681489_68682835_68682974_68686355_68686708_68690807
transcript_17491.known	chr10	+	4658	25	FSM	ENSG00000060339.14	ENST00000265872.11	4658	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	121.453344665989	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	68713592	True	NA	19	True	ATTAAA	-19	NA	68721238	68792377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142_68788329_68789709_68789916_68791206
transcript_17498.known	chr10	+	2432	17	FSM	ENSG00000060339.14	ENST00000541012.5	2432	17	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_13	92.7738345386241	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGTAATAACAACCTGC	68713580	True	NA	13	True	GATAAA	-30	NA	68721226	68771444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68737844_68737890_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68757293_68757378_68761006_68761193_68765887_68766080_68771205
transcript_17503.nnic	chr10	+	688	4	NNC	ENSG00000060339.14	novel	4658	25	NA	NA	11	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	190.952582828536	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGTACTTCCTTCAGAA	68721026	True	NA	19	True	ATTAAA	-19	NA	68721154	68792377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_68721283_68722454_68722578_68736875_68736978_68792042
transcript_17504.nic	chr10	+	892	3	ISM	ENSG00000060339.14	ENST00000543225.5	2407	16	-87	33785	11	606	5prime_fragment	FALSE	canonical	3	289	junction_1	87	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAGTTGAATAGTCAAAA	68721026	True	NA	NA	False	NA	NA	NA	68721154	68737516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_68721283_68722454_68722578_68736875
transcript_17505.known	chr10	+	570	3	FSM	ENSG00000060339.14	ENST00000494903.2	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	228	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATCTCCTACCATTTATAC	68713605	False	NA	NA	False	NA	NA	NA	68721251	68736910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721664_68722454_68722578_68736875
transcript_17506.known	chr10	+	3224	22	FSM	ENSG00000060339.14	ENST00000539539.5	3224	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	140.865851818731	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAAACAGGTAAGGGT	68713592	True	NA	13	True	AAAAAG	-37	NA	68721238	68788316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68721283_68722454_68722578_68736875_68737049_68740628_68740662_68742375_68742570_68747160_68747276_68747373_68747567_68749135_68749266_68749523_68749686_68753851_68754078_68754713_68754828_68755369_68755537_68756272_68756484_68757293_68757378_68761006_68761193_68765887_68766080_68771205_68771446_68772987_68773100_68786135_68786219_68786545_68786693_68787926_68788048_68788142
transcript_17508.nic	chr10	+	2663	16	NIC	ENSG00000107625.14	novel	2501	15	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	103.207148761874	787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	68896751	True	NA	24	True	AATAAA	-28	NA	68901264	68946847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_68901472_68906225_68906338_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_17509.known	chr10	+	2501	15	FSM	ENSG00000107625.14	ENST00000373585.8	2501	15	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_6	31.1796146119053	1088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTGTTAAGAATTTTC	68896801	True	NA	24	True	AATAAA	-28	NA	68901314	68946847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68901472_68906710_68907008_68910306_68910383_68911067_68911247_68913161_68913280_68913390_68913577_68914058_68914205_68919831_68919982_68934198_68934361_68934798_68934919_68936005_68936080_68936935_68937096_68941059_68941195_68943212_68943258_68946351
transcript_17519.known	chr10	+	4829	15	FSM	ENSG00000165732.14	ENST00000620315.2	4776	15	29	-82	29	-1	multi-exon	FALSE	canonical	3	26	junction_1	189.216806864507	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTAGTGGCTTTTGTTTT	68956417	True	NA	13	True	AATAAA	-15	NA	68956439	68985067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68956749_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_17525.known	chr10	+	4664	15	FSM	ENSG00000165732.14	ENST00000354185.9	4664	15	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_3	56.7997287288722	2034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGTGGCTTTTGTTTTC	68932654	True	NA	14	True	AATAAA	-16	NA	68956169	68985068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68956313_68959805_68960250_68962081_68962158_68963290_68963470_68965376_68965495_68967017_68967204_68968975_68969122_68970200_68970351_68971890_68972053_68973544_68973665_68974669_68974744_68977528_68977689_68978841_68978977_68981536_68981582_68982542
transcript_17526.known	chr10	+	2583	8	FSM	ENSG00000198954.9	ENST00000635779.2	2583	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	165.181903441296	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69007626_69007752_69008840_69008926_69010899_69011016_69015540
transcript_17527.known	chr10	+	2533	8	FSM	ENSG00000198954.9	ENST00000638119.2	2533	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	165.902479345733	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_68995203_68995279_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_17528.known	chr10	+	2462	7	FSM	ENSG00000198954.9	ENST00000361983.7	2462	7	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_3	23.2999761564017	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTTTCCTTTTTGTTT	68983412	True	NA	NA	False	AATAAA	-29	NA	68988802	69016982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_1753.nnic	chr1	+	378	3	NNC	ENSG00000142655.13	novel	637	6	NA	NA	-67	-16277	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_2	51	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTAGTGACAGGGT	10471562	True	NA	NA	False	AATAAA	-21	NA	10474882	10520012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_10475003_10495273_10495322_10519802
transcript_17530.known	chr10	+	2359	6	FSM	ENSG00000198954.9	ENST00000675576.1	2359	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	151.112408491163	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_69005045_69005126_69005731_69005916_69008840_69008926_69010899_69011016_69015540
transcript_17531.known	chr10	+	2342	6	FSM	ENSG00000198954.9	ENST00000626493.2	2342	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	154.355952266182	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTTCTGTTTCCTTTTT	68983412	True	NA	NA	False	AATAAA	-25	NA	68988802	69016978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_68989259_69000423_69000523_69005045_69005126_69005731_69005916_69008840_69008926_69015540
transcript_17537.known	chr10	+	4227	9	FSM	ENSG00000122958.15	ENST00000263559.11	4227	9	0	0	0	0	multi-exon	FALSE	canonical	3	611	junction_8	60.8911682840788	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGAATTTTCTCATTGTT	69114356	True	NA	NA	False	ATTAAA	-21	NA	69124177	69174412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69168488_69168632_69171155
transcript_17541.known	chr10	+	2554	8	FSM	ENSG00000122958.15	ENST00000395098.5	2554	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	244.31704059793	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAACTGAGCTTGCTGTTT	69114330	True	NA	2	True	AATAAA	-12	NA	69124151	69172856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69124281_69132897_69133048_69155811_69155888_69157006_69157164_69158046_69158212_69162405_69162513_69166041_69166111_69171155
transcript_17552.nic	chr10	+	2614	16	NIC	ENSG00000156502.14	novel	2477	15	NA	NA	-2	0	combination_of_known_junctions	TRUE	canonical	2	20	junction_1	94.4374219611414	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	69176850	True	NA	5	True	AATAAA	-14	NA	69180231	69209093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_69180563_69182519_69182655_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_17555.known	chr10	+	2477	15	FSM	ENSG00000156502.14	ENST00000359655.9	2477	15	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_3	44.6778148845391	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTCCTCATATGCAT	69176852	True	NA	5	True	AATAAA	-14	NA	69180233	69209093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654_69191767_69195187_69195266_69196991_69197084_69198371_69198553_69199103_69199198_69200279_69200500_69202438_69202520_69202866_69203044_69207792_69207942_69208599
transcript_17570.nic	chr10	+	879	3	ISM	ENSG00000156502.14	ENST00000471069.5	2392	6	-26	6359	-10	-6359	5prime_fragment	FALSE	canonical	3	244	junction_1	8	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAAATATCATAGTTTCA	69176842	True	NA	NA	False	TATAAA	-14	NA	69180223	69186904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_69180563_69185986_69186065_69186442
transcript_17572.known	chr10	+	2392	6	FSM	ENSG00000156502.14	ENST00000471069.5	2392	6	0	0	0	0	multi-exon	FALSE	canonical	2	150	junction_3	40.8137231822827	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTTTACTATTTGGTAG	69176868	True	NA	NA	False	ATTAAA	-11	NA	69180249	69193263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69180563_69185986_69186065_69186442_69186551_69187641_69187757_69189266_69189436_69191654
transcript_17574.known	chr10	+	3602	18	FSM	ENSG00000156515.24	ENST00000359426.7	3602	18	0	0	0	0	multi-exon	FALSE	canonical	3	1398	junction_10	111.849441562552	1438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCCGAGTGATGCTTAATG	69309303	True	NA	29	True	AGTAAA	-18	NA	69318846	69401882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69319011_69343826_69343990_69359896_69360046_69364782_69364903_69368535_69368632_69369236_69369337_69369440_69369625_69376933_69377090_69379861_69380096_69382486_69382792_69384332_69384482_69384795_69384916_69386322_69386419_69389196_69389297_69392124_69392309_69394949_69395106_69398594_69398829_69400990
transcript_17587.known	chr10	+	1703	8	FSM	ENSG00000099282.10	ENST00000373290.7	1703	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.53405521487387	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	69450649	True	NA	16	True	AATAAA	-22	NA	69451464	69507666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_17588.nnic	chr10	+	1829	7	Fusion	ENSG00000099282.10_ENSG00000287306.1	novel	1703	8	NA	NA	-2	5215	multi-exon	FALSE	canonical	2	5	junction_6	19.9784606236038	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGCTATGAATACTTGTG	69450659	True	NA	NA	False	NA	NA	NA	69451474	69512881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_+_69451691_69483690_69483877_69485140_69485216_69495593_69495690_69498279_69498397_69504437_69504486_69511790
transcript_17593.nnic	chr10	+	1415	6	NIC	ENSG00000099282.10	novel	1703	8	NA	NA	15	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	19.7686620690425	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGCCTTTCCTGTGT	69450676	True	NA	16	True	AATAAA	-22	NA	69451491	69507666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_69451691_69495593_69495690_69498279_69498397_69504437_69504486_69506123_69506241_69506828
transcript_17594.known	chr10	+	616	2	FSM	ENSG00000099282.10	ENST00000478112.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTGTGTTCATCTGGAT	69450661	True	NA	NA	False	NA	NA	NA	69451476	69484092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69451691_69483690
transcript_17596.known	chr10	-	1560	2	FSM	ENSG00000122859.5	ENST00000242462.5	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGCATCTTTTTTTTTTAA	-69573217	True	NA	NA	False	NA	NA	NA	69573422	69571697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_69573045_69573209
transcript_1762.known	chr1	-	6035	6	FSM	ENSG00000160049.12	ENST00000377038.8	6035	6	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	118.404391810439	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTGTTCAAGCTTTTTT	-10459169	True	NA	0	True	AATAAA	-33	NA	10472529	10456521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_10461703_10463057_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_1763.known	chr1	-	1403	5	FSM	ENSG00000160049.12	ENST00000377036.2	1403	5	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	48.9846914862184	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGTTGGTGTTGTAAG	-10459128	True	NA	-9	True	AGTAAA	-15	NA	10472488	10462467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_10463210_10463430_10463621_10467189_10467333_10469176_10469339_10472322
transcript_17633.known	chr10	+	1073	4	FSM	ENSG00000171224.9	ENST00000373279.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	37.1573231902766	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628093	True	NA	115	True	AATAAA	-17	NA	69630246	69633596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69630314_69631479_69631548_69631708_69631840_69632789
transcript_17639.known	chr10	+	403	4	FSM	ENSG00000171224.9	ENST00000421716.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	97.8309199020887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCTTCAATGACCTCAAC	69628390	False	NA	NA	False	NA	NA	NA	69630543	69632877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69630660_69631479_69631548_69631708_69631840_69632789
transcript_1764.known	chr1	-	4405	16	FSM	ENSG00000130940.15	ENST00000344008.5	4405	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	5.29989517716048	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCGCCTGAGTGGCAGCTG	-10796201	True	NA	-9	True	AATAAA	-22	NA	10796650	10647212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_10648140_10649069_10649193_10649282_10649438_10650691_10650756_10650940_10651077_10653376_10654219_10654418_10654592_10655648_10655814_10656645_10656737_10658507_10658577_10659701_10660537_10665082_10665572_10693873_10693913_10705491_10705545_10760700_10760858_10796563
transcript_17642.known	chr10	+	746	3	FSM	ENSG00000171224.9	ENST00000491890.1	746	3	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	45.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGAGCAGGCATATTTG	69628097	True	NA	NA	False	NA	NA	NA	69630250	69633112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_69630314_69631479_69631840_69632789
transcript_17643.nnic	chr10	+	1041	3	NIC	ENSG00000171224.9	novel	1073	4	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	106.5	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGTCCATATAAAGAAATG	69628057	True	NA	115	True	AATAAA	-17	NA	69630210	69633596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_69630314_69631708_69631840_69632789
transcript_17648.known	chr10	+	1932	9	FSM	ENSG00000099284.15	ENST00000373255.9	1932	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	29.7436968112573	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTTTTATTGCAACATT	70049154	True	NA	30	True	AATAAA	-25	NA	70052845	70112282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70053001_70075599_70075831_70090059_70090167_70091756_70091955_70093734_70093846_70095653_70095754_70100207_70100298_70109032_70109208_70111517
transcript_17650.known	chr10	-	3134	9	FSM	ENSG00000042286.15	ENST00000307864.3	3134	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	9.06831709855803	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTGGATCTTTTATTTT	-70132085	True	NA	NA	False	AATAAA	-19	NA	70132825	70112270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70132733
transcript_17652.nnic	chr10	-	1496	9	Fusion	ENSG00000156521.14_ENSG00000042286.15	novel	3134	9	NA	NA	6	796	multi-exon	FALSE	canonical	2	7	junction_8	16.0993012270719	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGGGTTTGGAAGGTG	-70144433	True	NA	0	True	ATTAAA	-23	NA	70146694	70113978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_70114330_70114919_70115121_70116621_70116775_70117811_70117921_70120506_70120600_70121091_70121212_70123404_70123521_70123906_70124098_70146532
transcript_17661.known	chr10	-	2620	4	FSM	ENSG00000156521.14	ENST00000479086.1	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	53.597263611743	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAAGTGTGTCTCTGAGC	-70144415	True	NA	-6	True	AATAAA	-12	NA	70146676	70137982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70140142_70142667_70142854_70143841_70143973_70146532
transcript_17662.nnic	chr10	-	1317	4	NNC	ENSG00000156521.14	novel	3758	4	NA	NA	-18	-1225	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	70.4320003028926	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70146705	False	NA	-18	True	AATAAA	-18	NA	70146718	70139207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_70140142_70142667_70142854_70143841_70143973_70146652
transcript_17663.nnic	chr10	-	1234	3	NIC	ENSG00000156521.14	novel	3758	4	NA	NA	0	-1224	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	13.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTGTATTTATATATCAAA	-70144439	True	NA	-17	True	AATAAA	-19	NA	70146700	70139206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_70140142_70143841_70143973_70146532
transcript_17664.nnic	chr10	-	1102	2	NIC	ENSG00000156521.14	novel	3758	4	NA	NA	0	-1225	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGTATTTATATATCAA	-70144439	True	NA	-18	True	AATAAA	-18	NA	70146700	70139207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_70140142_70146532
transcript_17671.known	chr10	-	5981	8	FSM	ENSG00000079332.15	ENST00000373242.6	5981	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	183.89815282445	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154894	True	NA	-17	True	ATTAAA	-14	NA	70170523	70147288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70162689_70162760_70170412
transcript_17680.known	chr10	-	5902	7	FSM	ENSG00000079332.15	ENST00000373241.9	5902	7	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_6	54.8171201967658	3140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTACTGTTCATAGTCGATT	-70154885	True	NA	-17	True	ATTAAA	-14	NA	70170514	70147288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70152593_70153837_70153970_70157763_70157868_70161003_70161070_70161618_70161739_70161857_70161932_70170412
transcript_17698.known	chr10	-	1292	11	FSM	ENSG00000180817.12	ENST00000373232.8	1292	11	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_8	85.3789201149792	10992	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCTTAGGATATTTTTA	-70216474	True	NA	-5	True	AATAAA	-16	NA	70233429	70202834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70203187_70204872_70204916_70206263_70206334_70209204_70209291_70209557_70209686_70213462_70213590_70214499_70214587_70217811_70217932_70218763_70218818_70230340_70230400_70233263
transcript_17700.known	chr10	-	3095	5	FSM	ENSG00000172731.15	ENST00000373224.5	3095	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	41.583500333666	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGTTGGTGTTTGATT	-70379206	True	NA	-6	True	AATAAA	-19	NA	70382589	70298972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382493
transcript_17701.known	chr10	-	3074	5	FSM	ENSG00000172731.15	ENST00000446961.4	3074	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	12.5299640861417	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCTGGTTGGTGTTTGA	-70379242	True	NA	-8	True	AATAAA	-17	NA	70382625	70298974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70376451_70376597_70382548
transcript_17703.known	chr10	-	2959	4	FSM	ENSG00000172731.15	ENST00000395010.5	2959	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	37.0944739819828	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTGGTGTTTGATTCAT	-70379267	True	NA	-3	True	AATAAA	-22	NA	70382650	70298969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70340552_70340703_70382548
transcript_17704.known	chr10	-	2924	4	FSM	ENSG00000172731.15	ENST00000358141.6	2924	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	48.451579494951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379243	True	NA	-9	True	AATAAA	-16	NA	70382626	70298975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70323862_70324031_70376451_70376597_70382548
transcript_17705.known	chr10	-	2906	4	FSM	ENSG00000172731.15	ENST00000357631.6	2906	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	34.2928563989645	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCTGCCTGGTTGGTGTTTG	-70379243	True	NA	-9	True	AATAAA	-16	NA	70382626	70298975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70301509_70340552_70340703_70376451_70376597_70382548
transcript_17728.known	chr10	-	2058	3	FSM	ENSG00000156574.10	ENST00000287139.8	2058	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	106.5	831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTGTAGACTGAATAGGA	-70436508	True	NA	NA	False	ATTAAA	-36	NA	70441681	70431935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70433089_70435285_70435984_70441474
transcript_17729.known	chr10	+	5778	15	FSM	ENSG00000166224.17	ENST00000373202.8	5778	15	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_8	12.2865448224254	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGAAAGTGTTACCTGT	70809427	True	NA	135	True	AATAAA	-25	NA	70815947	70881184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70816127_70816810_70816881_70844472_70844639_70851142_70851211_70854707_70854856_70857613_70857691_70859370_70859500_70868344_70868434_70869791_70869898_70871047_70871147_70871836_70871987_70873350_70873590_70875401_70875549_70876540_70876662_70877194
transcript_17735.known	chr10	+	537	3	FSM	ENSG00000166224.17	ENST00000486993.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTGGGTCAGGCGTGG	70809440	True	NA	NA	False	ATTAAA	-16	NA	70815960	70820484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_70816127_70816810_70816881_70820183
transcript_17739.known	chr10	-	732	4	FSM	ENSG00000166228.9	ENST00000493228.1	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.984604373083	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTCTTCCGGGGGAAGGG	-70888232	False	3951	NA	False	NA	NA	NA	70888254	70883931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70887852
transcript_17745.known	chr10	-	389	3	FSM	ENSG00000166228.9	ENST00000493961.5	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	163	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGATGGTCTCTTCAGTT	-70885877	False	90	NA	False	AATACA	-35	NA	70885899	70882279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70882486_70885151_70885233_70885797
transcript_17746.known	chr10	-	787	4	FSM	ENSG00000166228.9	ENST00000299299.4	787	4	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	57.1858568373529	2599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGCTCTAGAAACTTC	-70884614	True	NA	-13	True	AATAAA	-18	NA	70888565	70883509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_70884049_70885151_70885233_70885797_70885930_70888530
transcript_17747.nnic	chr10	+	907	4	NNC	ENSG00000107731.12	novel	6841	17	NA	NA	57045	-22341	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_1	3.74165738677394	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGATAGTATTAAGTAAAT	71269816	True	NA	NA	False	AATAAA	-24	NA	71269971	71280523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_71270061_71274457_71274516_71278313_71278371_71279820
transcript_17752.known	chr10	-	472	2	FSM	ENSG00000237512.7	ENST00000449737.5	472	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	-71217253	False	NA	-3	True	AAGAAA	-16	NA	71217825	71217223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_71217636_71217765
transcript_17753.known	chr10	-	647	2	FSM	ENSG00000237512.7	ENST00000447119.3	717	2	66	4	66	0	multi-exon	FALSE	canonical	3	34	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTGTTTGGTTTCATT	NA	False	NA	-3	True	AAGAAA	-16	NA	71218228	71217223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_71217636_71217993
transcript_17754.known	chr10	+	2256	6	FSM	ENSG00000198246.9	ENST00000373189.6	2256	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	23.9382539045771	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGCCTCATTGATGTCT	71318302	True	NA	14	True	AATAAA	-16	NA	71319258	71363385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319311_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_17755.known	chr10	+	1927	4	FSM	ENSG00000198246.9	ENST00000644088.1	1927	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	53.9032054293208	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCATTGATGTCTCTGTT	71318326	True	NA	19	True	AATAAA	-21	NA	71319282	71363390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319311_71322755_71323055_71356080_71356244_71361953
transcript_17757.known	chr10	+	2496	6	FSM	ENSG00000198246.9	ENST00000644895.1	2496	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	59.7809334152621	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTGGTATGTGATTATT	71318322	True	NA	NA	False	ATTAAA	-20	NA	71319278	71381423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319311_71322755_71323055_71351561_71351789_71356080_71356244_71375694_71375812_71379765
transcript_17758.known	chr10	+	2621	6	FSM	ENSG00000198246.9	ENST00000479577.2	2621	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	51.9499759383967	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCAAGGGCGTAATAAATA	71318325	True	NA	-19	True	NA	NA	NA	71319281	71363352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_71319732_71322755_71323055_71344208_71344292_71351561_71351789_71356080_71356244_71361953
transcript_17762.known	chr10	-	2830	14	NNC	ENSG00000197746.15	novel	2748	14	NA	NA	-74	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	1393.18805146526	2062	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCTAATGTTTCTG	-71828478	True	NA	-22	True	AATAAA	-15	NA	71851325	71816298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_71817477_71818616_71818725_71819030_71819112_71819464_71819623_71819713_71819901_71820239_71820336_71821875_71822017_71825836_71825894_71828013_71828158_71828876_71829078_71831125_71831252_71831845_71831921_71834371_71834506_71851181
transcript_17763.known	chr10	-	5224	11	FSM	ENSG00000107742.14	ENST00000373109.7	5224	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	7.34846922834953	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCTGGCAATACTCTGAT	-72088470	True	NA	-2	True	AATAAA	-17	NA	72088551	72059033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72062906_72063024_72063163_72064177_72064241_72066901_72067121_72067612_72067733_72068186_72068302_72070311_72070427_72072143_72072259_72072502_72072549_72072901_72072911_72088139
transcript_17769.nic	chr10	-	2125	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.0808769376539	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	-72214080	False	NA	-13	True	ATTAAA	-15	NA	72215987	72096521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_17773.nic	chr10	-	1604	10	NIC	ENSG00000138303.18	novel	2167	11	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	46	junction_9	34.0808769376539	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	-72214080	False	NA	-2	True	CATAAA	-19	NA	72215987	72097042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72215781
transcript_17781.nnic	chr10	+	374	2	ISM	ENSG00000166295.9	ENST00000299381.5	3231	4	20	11706	3	-9461	5prime_fragment	FALSE	canonical	3	551	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAGCTCCACATTTCATT	72208282	True	NA	16	True	ATTAAA	-17	NA	72216031	72224154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_72216139_72223887
transcript_17783.known	chr10	-	2479	10	FSM	ENSG00000138303.18	ENST00000672957.1	2479	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	12.9022918817731	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTTAGTATGATCACA	-72214369	True	NA	-15	True	AATAAA	-14	NA	72216276	72096031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_17784.known	chr10	-	1816	8	FSM	ENSG00000138303.18	ENST00000317168.11	1816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	61.4654374425172	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTGGTCTATCATTTT	-72214400	False	NA	-11	True	ATTAAA	-17	NA	72216307	72096519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_17785.known	chr10	-	1349	9	FSM	ENSG00000138303.18	ENST00000672940.1	1349	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	43.876068363061	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTGCACAGTTCAGT	-72214370	True	NA	-2	True	CATAAA	-19	NA	72216277	72097042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72128081_72128168_72133056_72133182_72161537_72161675_72196810_72196990_72203426_72203525_72210731_72210832_72213186_72213332_72216206
transcript_17786.known	chr10	-	1798	9	FSM	ENSG00000138303.18	ENST00000486689.6	1798	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	62.7514940061191	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGCTTGGTCTATCATT	-72208830	False	NA	-13	True	ATTAAA	-15	NA	72210737	72096521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72102849_72102968_72128081_72128168_72133056_72133182_72152868_72152989_72161537_72161675_72196810_72196990_72203426_72203525_72210731
transcript_17787.known	chr10	-	839	6	FSM	ENSG00000138303.18	ENST00000530394.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	71.3851525178731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGCACAGTTCAGTAA	-72161540	False	NA	0	True	CATAAA	-21	NA	72161556	72097040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72097451_72102333_72102413_72128081_72128168_72133056_72133182_72152868_72152989_72161537
transcript_17799.known	chr10	+	3567	5	FSM	ENSG00000166295.9	ENST00000621663.4	3567	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_2	371.520776673391	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCACCTTTCTCATTGATC	72208250	True	NA	4	True	ATTAAA	-16	NA	72215999	72235858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72216139_72220053_72220380_72223887_72224057_72230365_72230441_72233000
transcript_17805.known	chr10	+	3231	4	FSM	ENSG00000166295.9	ENST00000299381.5	3231	4	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	226.582337254155	1523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTCTCATTGATCAC	72208262	True	NA	6	True	ATTAAA	-18	NA	72216011	72235860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72216139_72223887_72224057_72230365_72230441_72233000
transcript_17810.nic	chr10	+	630	4	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-18	-320	combination_of_known_junctions	FALSE	canonical	3	176	junction_1	394.659628315619	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	72208232	True	NA	29	True	NA	NA	NA	72215981	72233295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216073_72223887_72224057_72230365_72230441_72233000
transcript_17827.nnic	chr10	+	539	3	NIC	ENSG00000166295.9	novel	3231	4	NA	NA	-30	-320	combination_of_known_splicesites	FALSE	canonical	3	185	junction_1	459	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAATGTTTTGTTTATTTG	72208220	True	NA	29	True	NA	NA	NA	72215969	72233295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216139_72230365_72230441_72233000
transcript_1783.nic	chr1	+	1203	8	NIC	ENSG00000120948.19	novel	1793	10	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	2	33	junction_7	509.441711231871	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGTTTTGCAG	10992061	True	NA	3	True	AATAAA	-15	NA	11012637	11024043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022251_11023262_11023330_11023866
transcript_17832.known	chr10	+	734	3	FSM	ENSG00000166295.9	ENST00000478193.5	734	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	515	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTTTAGACATCAATT	72208279	True	NA	NA	False	TTTAAA	-16	NA	72216028	72233615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72216073_72230365_72230441_72233000
transcript_17855.nnic	chr10	+	372	2	NIC	ENSG00000166295.9	novel	734	3	NA	NA	-14	-13277	combination_of_known_splicesites	FALSE	canonical	3	74	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAGAAAAGAAAA	72208236	True	NA	NA	False	NA	NA	NA	72215985	72220338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_72216073_72220053
transcript_17857.known	chr10	+	1676	3	FSM	ENSG00000168209.6	ENST00000681898.1	1676	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	542.5	2763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	72269623	True	NA	8	True	AATAAA	-17	NA	72273923	72276036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72274061_72274224_72274422_72274694
transcript_17858.known	chr10	+	1744	3	FSM	ENSG00000168209.6	ENST00000307365.4	1744	3	0	0	0	0	multi-exon	FALSE	canonical	3	1075	junction_1	5	3583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTTGAGTCTCTCATCA	72269623	True	NA	8	True	AATAAA	-17	NA	72273923	72276036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72274061_72274156_72274422_72274694
transcript_17859.known	chr10	+	1830	2	FSM	ENSG00000168209.6	ENST00000473155.2	1830	2	0	0	0	0	multi-exon	FALSE	canonical	3	1085	junction_1	0	2626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAAAACAGTTGGTTGAG	72269623	True	NA	-2	True	AATAAA	-7	NA	72273923	72276026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_72274422_72274694
transcript_17861.known	chr10	-	2935	9	FSM	ENSG00000148719.16	ENST00000444643.8	2935	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	40.3322141718007	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTGTTAATATATGTTTA	-72352243	True	NA	32	True	NA	NA	NA	72354919	72332862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72334618_72335779_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_17862.nic	chr10	-	1304	9	NIC	ENSG00000148719.16	novel	3198	9	NA	NA	-65	18	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	45.4278273748591	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTGCACAGCTGCCCTCTC	-72352308	True	NA	-8	True	ATTAAA	-19	NA	72354984	72334504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_72334618_72335833_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_17864.known	chr10	-	4360	8	FSM	ENSG00000148719.16	ENST00000338820.7	4360	8	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	12.3337929680854	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGTGGGTCTGCATTGAG	-72355135	True	NA	0	True	AATATA	-20	NA	72355149	72332829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72335932_72336523_72336697_72338201_72338312_72340788_72340869_72340984_72341171_72343365_72343512_72344949_72345128_72354764
transcript_17873.known	chr10	-	2357	12	FSM	ENSG00000107745.20	ENST00000361114.10	2357	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_9	26.0609584190415	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTCTCCTTTATTTTAG	-72619676	True	NA	-14	True	AATAAA	-14	NA	72626079	72367339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508270_72533745_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_17883.known	chr10	-	580	3	FSM	ENSG00000107745.20	ENST00000604025.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_1	18	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGATCTAGGACCAATAA	-72619671	True	NA	NA	False	NA	NA	NA	72626074	72562710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72563064_72566632_72566795_72626009
transcript_17887.nnic	chr10	-	781	2	NNC	ENSG00000107745.20	novel	2357	12	NA	NA	-27	-58889	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTGTGGATATGATT	-72619755	True	NA	NA	False	AATAAA	-31	NA	72626158	72621599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_72622232_72626009
transcript_17891.known	chr10	-	2488	12	NNC	ENSG00000107745.20	novel	2357	12	NA	NA	-60	13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	76.4761076501826	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGGGTCCTCTAGGCC	-72619788	True	NA	-1	True	AATAAA	-27	NA	72626191	72367326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_72368356_72375782_72375873_72407928_72408038_72423233_72423372_72475099_72475298_72477173_72477257_72508154_72508272_72533741_72533790_72551178_72551342_72562894_72563064_72566632_72566795_72626009
transcript_17892.known	chr10	-	1564	4	FSM	ENSG00000138308.6	ENST00000373032.4	1564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAACCAGTAAATATG	NA	False	NA	NA	False	NA	NA	NA	72954806	72934761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_72935739_72941168_72941335_72942651_72942741_72954474
transcript_17893.known	chr10	-	546	2	FSM	ENSG00000213700.3	ENST00000396131.2	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCAGCATTAAAATAAA	-73006575	False	NA	NA	False	AAGAAA	-32	NA	73006595	73005832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73006150_73006366
transcript_17899.known	chr10	-	2844	15	FSM	ENSG00000122884.13	ENST00000263556.3	2844	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	99.9639986215445	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	-73096864	False	NA	-20	True	NA	NA	NA	73096974	73007223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_1790.known	chr1	+	1001	7	FSM	ENSG00000120948.19	ENST00000472476.5	1001	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	561.71624410274	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATCCAATGCCGAACCTA	10992077	True	NA	-24	True	ATTAAA	-15	NA	11012653	11022176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11016122_11016255_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_17903.known	chr10	-	2743	15	FSM	ENSG00000122884.13	ENST00000394890.7	2743	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	135.323139339938	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTTCTGTGTGGTG	-73092893	True	NA	-13	True	TTTAAA	-5	NA	73096866	73007216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73016845_73016900_73030270_73030371_73044980_73045052_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17910.known	chr10	-	2790	14	FSM	ENSG00000122884.13	ENST00000440381.5	2790	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	101.796525207783	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAATGTTTGTTTTCTG	-73096864	False	NA	-20	True	NA	NA	NA	73096974	73007223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73008293_73009806_73009904_73010968_73011038_73014223_73014290_73030270_73030371_73043886_73043958_73046924_73047102_73051052_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17918.nic	chr10	-	1232	7	ISM	ENSG00000122884.13	ENST00000440381.5	2790	14	-163	43901	-163	-41485	5prime_fragment	FALSE	canonical	3	353	junction_4	18.9032625050104	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTTGCTGTGGATTACCT	NA	False	NA	NA	False	AAGAAA	-4	NA	73097137	73051124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73051250_73053350_73053591_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17920.nnic	chr10	-	941	6	NNC	ENSG00000122884.13	novel	2727	15	NA	NA	-67	-53522	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	143.384239022286	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCCAGTCCTTGGTATTT	-73096931	False	NA	NA	False	AATAAA	-17	NA	73097041	73063161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_73063332_73068845_73068984_73072028_73072181_73073730_73073828_73074807_73074916_73096765
transcript_17927.known	chr10	-	3006	14	FSM	ENSG00000122882.11	ENST00000372979.9	3006	14	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_11	39.8272898619964	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTTTACAGACAGCTC	-73163110	True	NA	-41	True	ATTAAA	-13	NA	73168008	73133667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73163732_73163951_73167865
transcript_17932.known	chr10	-	1679	12	FSM	ENSG00000122882.11	ENST00000484976.6	1679	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	187.677717430266	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTAGTTTAGATTACTCA	-73163050	True	NA	-11	True	AATAAA	-22	NA	73167948	73134523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73134814_73136703_73136919_73138002_73138071_73139308_73139496_73139630_73139738_73146275_73146362_73148275_73148405_73152292_73152422_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_17942.known	chr10	-	877	6	FSM	ENSG00000122882.11	ENST00000413026.1	877	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	187.263023579136	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTTGTCGTGTTTTCAA	-73163180	False	NA	NA	False	NA	NA	NA	73168078	73154309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73154449_73156274_73156454_73156567_73156578_73160433_73160552_73163732_73163951_73167865
transcript_17944.known	chr10	-	128	1	FSM	ENSG00000221164.1	ENST00000408237.1	128	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGAAAAAAAATTATA	NA	False	NA	0	True	NA	NA	NA	73126207	73126079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73126100_73126200
transcript_17945.known	chr10	+	365	3	FSM	ENSG00000166321.14	ENST00000469925.1	365	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATATATATTTTTACT	73110238	True	NA	NA	False	AATAAA	-13	NA	73110519	73115168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73114943
transcript_17946.known	chr10	+	1919	8	FSM	ENSG00000166321.14	ENST00000372997.3	1919	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.80645824036021	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	73110248	True	NA	NA	False	AATAAA	-19	NA	73110529	73131828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73126672_73126828_73130702
transcript_17947.known	chr10	-	884	6	FSM	ENSG00000122882.11	ENST00000453402.5	884	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	167.579712375932	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTCCATCTGATCCC	NA	False	NA	NA	False	NA	NA	NA	73168095	73152345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73152422_73154255_73154449_73156274_73156454_73156567_73156656_73160433_73160552_73167865
transcript_17948.known	chr10	-	2295	5	FSM	ENSG00000213551.7	ENST00000372950.6	2295	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	17.8115131305569	860	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGCTGCATTCATGAAT	-73224979	False	22276	-3	True	AATAAA	-19	NA	73247255	73241953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73243520_73243842_73243930_73245921_73246177_73246687_73246829_73247009
transcript_17949.known	chr10	+	1835	7	FSM	ENSG00000166321.14	ENST00000349051.9	1835	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.35412613473634	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGATGTCTTTTTCTGT	73110177	True	NA	NA	False	AATAAA	-19	NA	73110458	73131828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73110568_73114356_73114449_73120017_73120158_73122174_73122310_73124213_73124321_73125117_73125244_73130702
transcript_17961.known	chr10	+	548	3	FSM	ENSG00000227540.1	ENST00000457758.1	548	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTTCACATTATTA	73252252	False	NA	2	True	ATTAAA	-20	NA	73253031	73254344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73253064_73253190_73253255_73253892
transcript_17973.known	chr10	-	612	3	FSM	ENSG00000182180.14	ENST00000473427.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	657	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTGCCCTTGCTCTTCT	-73230358	True	NA	31	True	AATAAA	-11	NA	73252634	73250743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73250992_73251762_73252024_73252531
transcript_17975.known	chr10	+	762	2	FSM	ENSG00000227540.1	ENST00000457147.1	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	73252011	True	NA	7	True	ATTAAA	-25	NA	73252790	73254349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73253096_73253892
transcript_17976.known	chr10	+	635	2	FSM	ENSG00000227540.1	ENST00000394864.2	635	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTCACATTATTACCAGC	73252389	False	NA	7	True	ATTAAA	-25	NA	73253168	73254349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73253255_73253800
transcript_17978.known	chr10	-	866	3	FSM	ENSG00000182180.14	ENST00000372940.3	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	688	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTACATAATTTGGCTA	-73230417	True	NA	-120	True	AAAAAG	-3	NA	73252693	73248937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73249319_73251762_73252024_73252469
transcript_17979.known	chr10	-	658	3	FSM	ENSG00000182180.14	ENST00000471251.5	658	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	658.5	2136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGCCCTTGCTCTTCTGGC	-73230128	False	NA	-29	True	AATAAA	-14	NA	73252404	73250740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73250992_73251762_73252024_73252258
transcript_17981.known	chr10	-	2174	14	FSM	ENSG00000138279.16	ENST00000372919.8	2174	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	342.437106046692	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-73405633	True	NA	-26	True	AATAAA	-13	NA	73414067	73375444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396043_73396110_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_17984.known	chr10	-	2443	13	FSM	ENSG00000138279.16	ENST00000372921.10	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_12	126.357957142925	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTCTGTGTCTGGCT	-73405624	True	NA	-5	True	TATAAA	-13	NA	73414058	73375100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73400802_73400858_73414011
transcript_17988.nic	chr10	-	2062	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	260.900981818869	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAGGTGTACAATATGGT	-73405642	True	NA	-26	True	AATAAA	-13	NA	73414076	73375444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_1799.known	chr1	+	1031	7	FSM	ENSG00000120948.19	ENST00000629725.2	1031	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	423.427942184054	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTGCCATAGGAATAC	10992045	True	NA	NA	False	NA	NA	NA	11012621	11023248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022251_11023192
transcript_17991.nic	chr10	-	1726	12	NIC	ENSG00000138279.16	novel	2174	14	NA	NA	0	-132	combination_of_known_junctions	FALSE	canonical	3	38	junction_11	260.900981818869	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGTGTAATAATATTGAA	-73405642	True	NA	0	True	AATAAA	-19	NA	73414076	73375780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_73376218_73378910_73379024_73379878_73379955_73380030_73380202_73383174_73383346_73383576_73383691_73387688_73387784_73388311_73388415_73396518_73396584_73397163_73397275_73398180_73398386_73414011
transcript_17998.known	chr10	-	438	1	FSM	ENSG00000229659.1	ENST00000440913.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	338	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATCTTATATACAAGCT	NA	False	NA	NA	False	AATACA	-33	NA	73422696	73422258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73422300_73422700
transcript_18.known	ERCC-00042	+	1007	1	FSM	ERCC-00042A	DQ516783	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	964	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAACA	-5	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00042_+_0_1000
transcript_18003.known	chr10	+	2394	5	FSM	ENSG00000221817.11	ENST00000422977.2	2394	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCTGTCTCTACTAAAAA	NA	False	NA	NA	False	NA	NA	NA	73495524	73505691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73495818_73496141_73496907_73499594_73499688_73504183_73504273_73504537
transcript_18007.known	chr10	+	489	2	ISM	ENSG00000221817.11	ENST00000600887.2	1212	3	1047	0	141	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTTTGGCCTAAAATAG	73496687	False	NA	NA	False	AATGAA	-19	NA	73496749	73499926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_73496907_73499594
transcript_18008.known	chr10	+	795	1	FSM	ENSG00000268584.1	ENST00000595595.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	69	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGGCTCACGCCTGTAA	NA	False	NA	NA	False	NA	NA	NA	73625995	73626790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73626000_73626800
transcript_18009.known	chr10	+	935	1	FSM	ENSG00000272791.1	ENST00000609434.1	935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGAATGTGGTTTTGTGCG	73630240	False	NA	5	True	AATAAA	-17	NA	73630555	73631490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73630600_73631500
transcript_18010.nnic	chr10	-	1502	7	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3526	0	multi-exon	FALSE	canonical	3	21	junction_6	6.3355259362494	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73647191	False	NA	NA	False	AATGAA	-43	NA	73647503	73631611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_18014.nnic	chr10	-	1400	6	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3526	0	multi-exon	FALSE	canonical	2	4	junction_5	11.6516093309036	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73647191	False	NA	NA	False	AATGAA	-43	NA	73647503	73631611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73647339
transcript_18016.nnic	chr10	-	933	5	Fusion	ENSG00000166317.12_ENSG00000177791.12	novel	1300	6	NA	NA	3526	-2725	multi-exon	FALSE	canonical	3	21	junction_4	0.866025403784439	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTGGTGAATTACCTGG	-73647191	False	NA	NA	False	ATTAAA	-30	NA	73647503	73634336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_73634734_73637743_73637923_73639944_73640036_73641410_73641513_73647339
transcript_18018.known	chr10	-	1300	6	FSM	ENSG00000177791.12	ENST00000359322.5	1300	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	6.32455532033676	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAACAATGCACAGAGACTA	-73641162	False	NA	NA	False	AATGAA	-43	NA	73641474	73631611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73632162_73633899_73634066_73634483_73634734_73637743_73637923_73639944_73640036_73641410
transcript_18020.known	chr10	-	1716	10	FSM	ENSG00000242338.6	ENST00000584747.5	1716	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	21.4941852602047	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACAGTGAAATAGATGT	-73729333	True	NA	NA	False	AATAAA	-18	NA	73730469	73715842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73716181_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730315
transcript_18021.nic	chr10	-	1651	10	NIC	ENSG00000242338.6	novel	1716	10	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	18.5831464863551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCACAGTGAAATAGATGT	NA	False	NA	NA	False	AATAAA	-18	NA	73730527	73715842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_73716181_73718014_73718166_73719159_73719300_73720537_73720660_73721361_73721505_73722388_73722578_73725960_73726041_73727292_73727483_73728378_73728588_73730438
transcript_18026.nic	chr10	-	1725	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-45	9071	-45	-7799	5prime_fragment	FALSE	canonical	0	0	junction_3	31.3723161756065	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAAAATAAGCCA	-73729378	True	NA	NA	False	NA	NA	NA	73730514	73724913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_18027.nic	chr10	-	1615	4	ISM	ENSG00000242288.9	ENST00000399449.3	3810	19	-61	50619	-61	-50619	5prime_fragment	FALSE	canonical	3	21	junction_3	22.1259023670348	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGCAAAAAATAAGCCA	NA	False	NA	NA	False	NA	NA	NA	73730527	73724913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730438
transcript_18029.nic	chr10	-	1414	4	ISM	ENSG00000242338.6	ENST00000584747.5	1716	10	-45	9382	-45	-8110	5prime_fragment	FALSE	canonical	0	0	junction_3	31.3723161756065	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	-73729378	True	NA	NA	False	AATAAA	-25	NA	73730514	73725224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730315
transcript_18030.nic	chr10	-	1304	4	ISM	ENSG00000242288.9	ENST00000399449.3	3810	19	-61	50930	-61	-50930	5prime_fragment	FALSE	canonical	3	21	junction_3	22.1259023670348	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAAGAAAAAGGCCAG	NA	False	NA	NA	False	AATAAA	-25	NA	73730527	73725224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73726041_73727292_73727483_73728378_73728588_73730438
transcript_18032.nnic	chr10	+	922	3	FSM	ENSG00000250959.3	ENST00000686626.1	897	3	-25	0	-2	0	multi-exon	FALSE	canonical	2	6	junction_2	3	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGCACTGCC	73730251	True	NA	8	True	AATAAA	-16	NA	73730559	73737787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73730874_73731187_73731256_73737247
transcript_18039.known	chr10	-	1236	1	FSM	ENSG00000279088.1	ENST00000625041.1	1236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	277	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGTAATAATAAAACTCT	-73744215	False	NA	-34	True	NA	NA	NA	73744230	73742994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73743000_73744200
transcript_18040.known	chr10	+	4513	24	FSM	ENSG00000176986.16	ENST00000339365.2	4513	24	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	125.304755151255	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736166	True	NA	13	True	AATAAA	-17	NA	73744390	73772161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73744438_73746629_73746717_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_18041.known	chr10	+	4445	23	FSM	ENSG00000176986.16	ENST00000345254.9	4445	23	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_1	42.3223560093459	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736147	True	NA	13	True	AATAAA	-17	NA	73744371	73772161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73744438_73746804_73747005_73751107_73751244_73759621_73759795_73760017_73760387_73760712_73760850_73763489_73763602_73763855_73763984_73765450_73765590_73765799_73765916_73766085_73766211_73766349_73766542_73766759_73766854_73767053_73767171_73767836_73768008_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_18045.nnic	chr10	+	2323	10	NIC	ENSG00000176986.16	novel	4513	24	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	209.074917165246	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736147	True	NA	13	True	AATAAA	-17	NA	73744371	73772161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_73744438_73746629_73746717_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_18046.nnic	chr10	+	2238	9	NIC	ENSG00000176986.16	novel	4445	23	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_1	171.800711217969	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTAGCCTCATCTTTACT	73736145	True	NA	13	True	AATAAA	-17	NA	73744369	73772161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_73744438_73768809_73768907_73769006_73769153_73769346_73769486_73769614_73769734_73769835_73770016_73770279_73770472_73770708_73770799_73770954
transcript_18049.known	chr10	+	2071	3	FSM	ENSG00000196968.11	ENST00000372841.8	2071	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTATTTTACTTATTTAT	73771104	True	NA	42	True	NA	NA	NA	73772275	73776219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73773042_73773189_73773816_73775540
transcript_18051.nnic	chr10	+	1660	3	NNC	ENSG00000196968.11	novel	2071	3	NA	NA	470	-1164	intron_retention	FALSE	canonical	2	7	junction_2	16.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACCTTCAAAAATAT	73773022	False	NA	NA	False	ACTAAA	-11	NA	73773033	73779087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_73773816_73775540_73776159_73778827
transcript_18057.known	chr10	+	850	3	FSM	ENSG00000172586.8	ENST00000372833.6	850	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	43	9657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCAGATATGTTT	73766423	True	NA	12	True	AATAAA	-21	NA	73782047	73783652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73782200_73782322_73782442_73783073
transcript_18058.known	chr10	+	1202	2	FSM	ENSG00000172586.8	ENST00000372837.3	1202	2	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_1	0	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGGCCTTTTGTTGTGA	73782035	False	NA	15	True	AATAAA	-14	NA	73782046	73783371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73782200_73782322
transcript_18059.known	chr10	-	3535	13	FSM	ENSG00000166507.19	ENST00000299641.8	3535	13	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_10	10.8806658292996	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCCTGGAGTGG	-73808721	False	NA	0	True	AATAAA	-20	NA	73808731	73801910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73802577_73802673_73802777_73802971_73803082_73803188_73803360_73803573_73803749_73803892_73804017_73804772_73804870_73805586_73805770_73805899_73806029_73806288_73806475_73806656_73806812_73807107_73807196_73807383
transcript_18061.nic	chr10	-	1219	3	ISM	ENSG00000166507.19	ENST00000309979.11	3758	15	-3	5828	-3	723	5prime_fragment	FALSE	canonical	3	102	junction_1	11	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCCTAGAACCAGGGCCACT	-73811591	False	1133	NA	False	NA	NA	NA	73811601	73807743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_73808730_73810798_73810904_73811473
transcript_18062.known	chr10	-	545	2	FSM	ENSG00000166507.19	ENST00000398701.2	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGGCAAGTTGTAATTT	-73810665	True	NA	2	True	ATTAAA	-24	NA	73811798	73810683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73810904_73811473
transcript_18068.known	chr10	-	3563	19	FSM	ENSG00000148660.21	ENST00000351293.7	3563	19	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	18.3541968827262	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTTACTGCTGTTGG	-73871447	True	NA	0	True	AATAAA	-18	NA	73874519	73812500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829_73860890_73872988_73873084_73874396
transcript_18069.known	chr10	-	1618	18	FSM	ENSG00000148660.21	ENST00000433289.5	1618	18	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	15.0102617724512	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATCCATACCATGATGCG	NA	False	NA	NA	False	AAAAAG	-26	NA	73860854	73814261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_73814506_73815002_73815248_73817022_73817118_73817478_73817555_73821681_73821731_73824039_73824085_73825278_73825348_73837467_73837512_73842168_73842212_73842457_73842542_73847224_73847348_73847987_73848083_73848525_73848610_73849012_73849116_73849260_73849334_73852253_73852320_73853191_73853247_73860829
transcript_18070.known	chr10	+	2343	11	FSM	ENSG00000122861.16	ENST00000372764.4	2343	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	13.9789126901916	154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACAAATCTCCCTGGTGCT	73910540	True	NA	24	True	AATAAA	-29	NA	73911131	73917494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73911219_73911524_73911613_73912040_73912069_73912214_73912323_73912923_73913099_73913289_73913382_73913538_73913759_73913979_73914129_73914775_73914917_73915250_73915400_73916388
transcript_18071.known	chr10	+	6489	21	FSM	ENSG00000035403.18	ENST00000372755.7	6489	21	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_5	102.551194532292	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGCAGGAAAGAATCATTT	73953368	True	NA	NA	False	AATAAA	-17	NA	73998113	74121363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_73998376_74043082_74043154_74070669_74070821_74070974_74071084_74072729_74072853_74074742_74074904_74082453_74082545_74083365_74083514_74089195_74089350_74090022_74090199_74094270_74094462_74095655_74095856_74097203_74097333_74100947_74101098_74103819_74103929_74105050_74105354_74107229_74107355_74108970_74109157_74114183_74114388_74114794_74114900_74118022
transcript_18081.known	chr10	-	2320	10	FSM	ENSG00000185009.13	ENST00000372745.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	106.121639966294	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAACTTAAGTGAAACCT	-74150630	False	NA	-15	True	ATTAAA	-10	NA	74150842	74122963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74138805_74138932_74150754
transcript_18087.known	chr10	-	4889	9	FSM	ENSG00000185009.13	ENST00000355264.9	4889	9	0	0	0	0	multi-exon	TRUE	canonical	3	74	junction_8	79.7134516565429	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGAGGATTAGTTTCATT	-74148235	True	NA	-5	True	AATAAA	-18	NA	74150828	74120254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_74123911_74124379_74124525_74126147_74126356_74129107_74129242_74129906_74129993_74134026_74134165_74136631_74136804_74138106_74138383_74150754
transcript_18102.known	chr10	+	1992	11	FSM	ENSG00000156110.15	ENST00000539909.6	1992	11	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	74.4782518591837	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74149673	True	NA	7	True	AATAAA	-19	NA	74151220	74709290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_18108.known	chr10	+	1993	11	FSM	ENSG00000156110.15	ENST00000372734.5	1993	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	50.3444137914029	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGGTATAATTGGACT	74174330	True	NA	7	True	AATAAA	-19	NA	74176762	74709290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_1811.known	chr1	+	929	6	FSM	ENSG00000120948.19	ENST00000476201.5	929	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	589.863509635916	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATCAGGTATTTTTCT	10992077	True	NA	NA	False	NA	NA	NA	11012653	11020589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11015523_11015647_11016843_11017008_11018732_11018874_11020428
transcript_18117.known	chr10	+	2494	10	FSM	ENSG00000156110.15	ENST00000673352.1	2494	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	138.834656078355	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCAGTGAGGCAAGATCAC	74149692	True	NA	NA	False	NA	NA	NA	74151239	74709926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74670182_74670270_74708320
transcript_18122.known	chr10	+	1249	10	FSM	ENSG00000156110.15	ENST00000672429.1	1249	10	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_6	136.114965931808	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGAAATTTTTATTTCAT	74149654	True	NA	6	True	ATTAAA	-18	NA	74151201	74708699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74151344_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_1814.known	chr1	+	4185	6	FSM	ENSG00000120948.19	ENST00000240185.8	4185	6	0	0	0	0	multi-exon	FALSE	canonical	3	1107	junction_4	60.7177074666032	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAGTGTCTGGAGTCTTA	10992077	True	NA	4	True	AATAAA	-20	NA	11012653	11025492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123
transcript_18142.known	chr10	+	1188	10	FSM	ENSG00000156110.15	ENST00000673027.1	1188	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	128.02777476435	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTTCCTACTATAATAAT	74174330	True	NA	NA	False	AATAAA	-19	NA	74176762	74708539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74176887_74200763_74200839_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_18173.known	chr10	+	3212	12	FSM	ENSG00000156110.15	ENST00000673310.1	3212	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	158.717640028443	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCAATAGAGTGAGACTC	74175703	True	NA	NA	False	NA	NA	NA	74176550	74709963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74176887_74200763_74200839_74224537_74224592_74314666_74314746_74394140_74394314_74398470_74398580_74525255_74525427_74527759_74528094_74589281_74589318_74600378_74600494_74670182_74670270_74708320
transcript_18175.known	chr10	+	877	3	FSM	ENSG00000156650.14	ENST00000648828.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	28.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATGGGTTGGATAAGAAG	74824858	True	NA	NA	False	NA	NA	NA	74824926	74842972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74825361_74838682_74838753_74842599
transcript_18178.known	chr10	+	7297	18	FSM	ENSG00000156650.14	ENST00000372711.2	7297	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.8527101924423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTTTAGCCTCTTGTGTC	74826928	True	NA	0	True	AATAAA	-12	NA	74827057	75032285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_74827115_74838682_74838753_74842599_74843479_74959969_74960079_74969659_74969776_74970019_74970102_74972506_74972640_74975398_74975782_74977315_74977438_74979223_74979340_74981786_74981929_74985079_74985242_74989018_74989113_75020581_75020814_75021125_75021286_75021880_75022232_75024957_75025250_75028488
transcript_18181.nic	chr10	+	1493	6	NIC	ENSG00000156671.15	novel	6906	6	NA	NA	-35	-3180	combination_of_known_junctions	FALSE	canonical	3	55	junction_1	13.614697940094	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTAACTTTGCGTTCTCC	75111047	False	NA	18	True	ATTAAA	-21	NA	75111599	75176743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_75111779_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_18182.known	chr10	+	6761	6	FSM	ENSG00000156671.15	ENST00000542569.6	6761	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	15.587174214719	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGTTTCTTATTGAAAT	75110496	True	NA	NA	False	AATAAA	-17	NA	75111655	75182123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75111723_75150513_75151107_75164644_75164741_75168540_75168659_75176065_75176217_75176387
transcript_18185.nnic	chr10	-	1258	6	NNC	ENSG00000079393.21	novel	1129	6	NA	NA	2581	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	4.57820925690384	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75106399	True	NA	NA	False	AATAAA	-18	NA	75106518	75094435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75103893_75104098_75106397
transcript_18187.nnic	chr10	-	1072	5	NNC	ENSG00000079393.21	novel	1110	5	NA	NA	2563	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	4.63680924774785	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75106417	True	NA	NA	False	AATAAA	-18	NA	75106536	75094435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75101866_75101962_75106397
transcript_18191.nnic	chr10	-	973	4	NNC	ENSG00000079393.21	novel	1320	4	NA	NA	2567	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.97614984548545	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75106413	True	NA	NA	False	AATAAA	-18	NA	75106532	75094435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75097711_75097886_75106397
transcript_18192.known	chr10	-	781	4	FSM	ENSG00000079393.21	ENST00000372700.7	781	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.40870359029762	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGCAGGCAGCCAGGATC	NA	False	NA	NA	False	NA	NA	NA	75109191	75094675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75094879_75095574_75095796_75097711_75097886_75109008
transcript_18194.nnic	chr10	-	795	3	NNC	ENSG00000079393.21	novel	1320	4	NA	NA	2571	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75106409	True	NA	NA	False	AATAAA	-18	NA	75106528	75094435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_75094879_75095574_75095796_75106397
transcript_18198.known	chr10	-	684	3	FSM	ENSG00000079393.21	ENST00000464872.5	684	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGGTGATCTTTTGGTGG	-75097765	False	NA	NA	False	AATAAA	-18	NA	75097884	75094435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75094879_75095727_75095796_75097711
transcript_1820.known	chr1	+	816	5	FSM	ENSG00000120948.19	ENST00000621715.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	520.312646396376	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATCAAGGTAGTAATATG	10992093	True	NA	110	True	NA	NA	NA	11012669	11022310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11016843_11017008_11018732_11018874_11022123
transcript_18208.known	chr10	+	1424	10	FSM	ENSG00000165637.14	ENST00000543351.5	1424	10	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	908.496451544603	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAATGGCTCCAAGTA	75210129	False	NA	10	True	AATAAA	-11	NA	75210153	75231444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75210213_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_1821.known	chr1	+	1388	5	FSM	ENSG00000120948.19	ENST00000439080.6	1388	5	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_2	476.142310659324	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAATATTGAGTGGTTG	10992076	True	NA	9	True	AAAAAG	-41	NA	11012652	11022858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012744_11013715_11013966_11018732_11018874_11020428_11020600_11022123
transcript_18226.known	chr10	+	1557	10	FSM	ENSG00000165637.14	ENST00000332211.11	1512	10	-45	0	-24	0	multi-exon	FALSE	canonical	3	2672	junction_4	152.087775176129	6736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGGCTCCAAGTATTTG	75210457	False	NA	14	True	AATAAA	-15	NA	75210750	75231448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75210939_75211133_75211190_75212229_75212299_75214020_75214071_75219062_75219216_75219303_75219357_75220742_75220971_75222251_75222403_75229643_75229702_75230897
transcript_18227.known	chr10	-	1250	7	FSM	ENSG00000165644.11	ENST00000372538.8	1250	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	55.9665078417441	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACGGGTGTCACTTGTGTG	-75234449	True	NA	NA	False	NA	NA	NA	75235957	75233640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235615_75235744_75235834
transcript_18229.known	chr10	-	796	5	FSM	ENSG00000165644.11	ENST00000470947.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_3	17.1810215063017	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACACGACCTCCTG	-75235500	False	NA	-20	True	AATAAA	-7	NA	75235512	75233983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266
transcript_18230.known	chr10	-	562	4	FSM	ENSG00000165644.11	ENST00000490521.1	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	19.1543438647449	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCCCGGGCACCTCCC	-75235324	False	NA	NA	False	NA	NA	NA	75235336	75234425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234744_75234937_75234993_75235059_75235179_75235266
transcript_18232.known	chr10	-	539	4	FSM	ENSG00000165644.11	ENST00000494596.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	112.384261452493	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACGACCTCCTGAGCCTC	-75234428	True	NA	-14	True	AATAAA	-13	NA	75235936	75233977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235834
transcript_18233.known	chr10	-	871	7	FSM	ENSG00000165644.11	ENST00000469299.1	871	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	94.1713863124038	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACACACGACCTCCTG	-75234417	True	NA	-20	True	AATAAA	-7	NA	75235925	75233983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_75234226_75234609_75234744_75234937_75234993_75235059_75235179_75235266_75235373_75235619_75235744_75235834
transcript_18234.known	chr10	+	1905	3	FSM	ENSG00000272692.2	ENST00000609200.2	1905	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATTGTGTTATTGCCTAT	NA	False	NA	NA	False	AATAAA	-20	NA	75409141	75411842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_75409441_75410129_75410185_75410291
transcript_18235.nnic	chr10	+	573	4	NNC	ENSG00000148655.15	novel	393	3	NA	NA	-33411	43	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.82842712474619	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTACACCCCAGGGCAT	NA	False	NA	NA	False	NA	NA	NA	76002594	76058832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_76002734_76036007_76036135_76047163_76047304_76058665
transcript_18236.known	chr10	+	393	3	FSM	ENSG00000148655.15	ENST00000611306.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTACTTGCTGTTCTTCA	NA	False	NA	NA	False	NA	NA	NA	76036005	76058789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_76036135_76047163_76047304_76058665
transcript_18238.known	chr10	-	2963	2	FSM	ENSG00000156113.24	ENST00000480683.2	2963	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAACCTCTCTGGTGTCTA	-77637783	False	NA	NA	False	AATAAA	-22	NA	77637821	77634109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77636516_77637264
transcript_18239.known	chr10	-	896	2	FSM	ENSG00000156113.24	ENST00000481070.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGTGAGCCAGCTGCCTT	-77637751	False	NA	NA	False	AATAAA	-21	NA	77637789	77636198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77636570_77637264
transcript_18245.nnic	chr10	+	483	2	NNC	ENSG00000233871.2	novel	487	2	NA	NA	-1340	1	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	0	246	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGGTTCTTGTTTTAA	NA	False	NA	5	True	AATAAA	-15	NA	77926031	77929825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_77926278_77929588
transcript_18246.known	chr10	+	487	2	FSM	ENSG00000233871.2	ENST00000449852.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCAGTGGTTCTTGTTTTA	NA	False	NA	4	True	AATAAA	-14	NA	77927371	77929824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_77927623_77929588
transcript_18248.known	chr10	-	6610	31	FSM	ENSG00000148606.14	ENST00000372371.8	6610	31	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_13	23.5518340875799	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATGAATAGTTACAAATT	-78025007	True	NA	-30	True	AATAAA	-23	NA	78029515	77975148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_77977627_77980140_77980274_77981427_77981560_77982153_77982319_77982652_77982818_77983919_77984013_77984204_77984299_77985169_77985341_77985902_77985986_77986072_77986160_77991053_77991168_77993196_77993368_77999980_78000119_78000975_78001095_78002196_78002309_78004715_78004889_78007701_78007867_78009536_78009676_78009863_78009992_78010470_78010541_78013649_78013791_78017574_78017717_78019161_78019266_78021545_78021683_78021859_78022023_78022144_78022385_78024548_78024704_78024970_78025143_78025621_78025760_78026093_78026230_78029363
transcript_1826.known	chr1	+	870	1	FSM	ENSG00000120948.19	ENST00000607145.1	870	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGTTTGTAGTAGTCA	11029648	False	NA	7	True	ATTAAA	-15	NA	11029658	11030528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11029700_11030500
transcript_1827.known	chr1	+	701	5	FSM	ENSG00000120948.19	ENST00000473118.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	505.888574688142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTGAGGATGAGCTGCGG	11012229	True	NA	NA	False	NA	NA	NA	11012343	11020489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11012429_11013715_11013966_11016843_11017008_11018732_11018874_11020428
transcript_18274.known	chr10	+	539	5	FSM	ENSG00000138326.21	ENST00000482069.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5910.82855338403	5086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGTCTGGTTGTTTGAAA	77943727	False	NA	13	True	AATAAA	-12	NA	78033916	78040696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033987_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_1828.known	chr1	+	1835	6	FSM	ENSG00000120948.19	ENST00000315091.7	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	446.732403122943	1381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCAAGTCAAATGGATTC	10993139	False	NA	9	True	AATAAA	-16	NA	11013715	11024183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11013966_11016843_11017008_11018732_11018874_11020428_11020600_11022123_11022242_11023192
transcript_18284.known	chr10	+	2146	1	FSM	ENSG00000138326.21	ENST00000480662.2	2146	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	78038492	False	NA	18	True	AATAAA	-17	NA	78038555	78040701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78038600_78040700
transcript_18285.known	chr10	+	634	5	FSM	ENSG00000138326.21	ENST00000613865.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	3	5804	junction_4	3360.69869037675	114181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGCAGTTTCCTGGG	77943570	True	NA	33	True	AATAAA	-32	NA	78033759	78040716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040614
transcript_18286.known	chr10	+	583	7	FSM	ENSG00000138326.21	ENST00000645440.1	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_5	5899.16990629473	5410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTTGTTTGAAATGTAT	77943646	True	NA	18	True	AATAAA	-17	NA	78033835	78040701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78037964_78037983_78040203_78040226_78040614
transcript_18287.known	chr10	+	534	6	FSM	ENSG00000138326.21	ENST00000372360.9	534	6	0	0	0	0	multi-exon	FALSE	canonical	3	4485	junction_4	4239.05690454846	71733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	77943673	True	NA	14	True	AATAAA	-13	NA	78033862	78040697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78040203_78040226_78040614
transcript_18288.known	chr10	+	714	4	FSM	ENSG00000138326.21	ENST00000475468.6	714	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6595.43308324446	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTCAAGAAAGCAACGAAAG	77943714	True	NA	-23	True	AAAAAG	-2	NA	78033903	78037218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78034317_78035351_78035418_78035510_78035721_78037193
transcript_18289.known	chr10	+	1008	4	FSM	ENSG00000138326.21	ENST00000478655.6	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	10554	junction_1	1643.97816963067	1742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTGTTCTGTGAACT	77943673	True	NA	NA	False	AATAGA	-32	NA	78033862	78037883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193
transcript_1829.known	chr1	+	434	2	FSM	ENSG00000120948.19	ENST00000617757.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCTTCAAATAAACTTA	11023300	False	NA	-22	True	CATAAA	-20	NA	11023322	11024152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11023668_11024063
transcript_18290.known	chr10	+	2712	5	FSM	ENSG00000138326.21	ENST00000440692.6	2712	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	5736.06085981486	1738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGAGTTGGTTTATCTGT	77943673	True	NA	9	True	AATAAA	-22	NA	78033862	78056813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78033905_78035351_78035418_78035510_78035721_78037193_78037305_78054530
transcript_18291.known	chr10	+	400	5	FSM	ENSG00000138326.21	ENST00000645195.1	400	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	5821.03392877932	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGGTTGTTTGAAAT	78034747	False	NA	14	True	AATAAA	-13	NA	78035565	78040697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78035721_78037193_78037305_78037964_78037994_78040203_78040226_78040614
transcript_18293.known	chr10	+	1232	2	FSM	ENSG00000230417.12	ENST00000635520.1	1232	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCTGAGTCCCAAACTC	78179173	True	NA	NA	False	AGTAAA	-16	NA	78179197	78214996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_78179247_78213813
transcript_18294.known	chr10	+	2196	6	FSM	ENSG00000108179.14	ENST00000225174.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_5	19.4894843441277	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTCAGTCTCAAGTATTT	79336051	True	NA	NA	False	AATAAA	-1	NA	79347468	79355334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_79347744_79349075_79349107_79349664_79349754_79351486_79351584_79352316_79352393_79353706
transcript_18296.known	chr10	-	993	7	FSM	ENSG00000225484.7	ENST00000670682.1	993	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	70.7106781186548	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCGGGTGTGGTGGCTCA	-79826271	False	NA	-26	True	AATAAA	-13	NA	79826282	79691503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79692057_79766270_79766325_79804484_79804528_79806038_79806123_79808762_79808833_79814612_79814717_79826197
transcript_18298.known	chr10	-	4096	6	FSM	ENSG00000225484.7	ENST00000665716.1	4096	6	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	12.687001221723	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTCACACTTTTCTTGGT	-79823163	True	NA	NA	False	AATAGA	-31	NA	79826484	79762820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79766325_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_1830.known	chr1	-	1260	8	FSM	ENSG00000116649.10	ENST00000376957.7	1260	8	0	0	0	0	multi-exon	FALSE	canonical	3	2586	junction_1	81.3330266527061	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	-11040429	True	NA	-7	True	NA	NA	NA	11060018	11054588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224_11059346_11059776
transcript_18300.known	chr10	-	716	6	FSM	ENSG00000225484.7	ENST00000496359.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	49.9799959983992	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATATGGTTCTATCTGGC	-79826277	False	NA	NA	False	GATAAA	-14	NA	79826288	79797707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_18301.known	chr10	-	1152	6	FSM	ENSG00000225484.7	ENST00000495430.2	1152	6	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	73.834951073323	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGGTTCTATCTGGCTTG	-79826583	False	NA	NA	False	GATAAA	-17	NA	79826594	79797704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79798028_79804484_79804528_79806038_79806123_79808762_79808964_79814612_79814717_79826197
transcript_18302.known	chr10	-	880	5	FSM	ENSG00000225484.7	ENST00000669121.1	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	13.4976849866931	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTTTATTATTTTAA	-79826333	False	NA	NA	False	AATAAA	-16	NA	79826344	79804056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_79804528_79806038_79806123_79808758_79808833_79814612_79814717_79826197
transcript_18308.known	chr10	-	3121	6	FSM	ENSG00000230091.6	ENST00000412298.5	3121	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTTTTATTCTCGC	-80078837	True	NA	NA	False	AATACA	-19	NA	80078895	80046859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80049179_80053395_80053587_80055915_80056127_80056318_80056406_80060789_80060934_80078726
transcript_1831.nic	chr1	-	1225	7	ISM	ENSG00000116649.10	ENST00000376957.7	1260	8	466	0	134	0	3prime_fragment	FALSE	canonical	3	2586	junction_1	78.0848897034503	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGGAGTCCTGTGTCTCC	-11039963	False	NA	-7	True	NA	NA	NA	11059552	11054588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_11054886_11054961_11055085_11055780_11055927_11056010_11056095_11056603_11056758_11058799_11058893_11059224
transcript_18310.known	chr10	+	860	5	FSM	ENSG00000133678.14	ENST00000372275.5	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	100.614052199482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGCTGCACTAAGATAAAG	80075706	True	NA	NA	False	NA	NA	NA	80078681	80091335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_18313.known	chr10	+	2154	5	FSM	ENSG00000133678.14	ENST00000613758.4	2154	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	97.3508474539385	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTGAATGCTTTTCTTGTA	NA	False	NA	15	True	AATAAA	-19	NA	80078645	80092550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_18318.known	chr10	+	785	5	FSM	ENSG00000133678.14	ENST00000476173.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	93.1541061896898	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGACACTTCCACTATAT	80078837	False	NA	NA	False	NA	NA	NA	80079294	80091352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090379_80090432_80090796
transcript_18320.known	chr10	+	847	5	FSM	ENSG00000133678.14	ENST00000463029.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	94.0438727403333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGTGACACTTCCACTA	80078815	True	NA	NA	False	NA	NA	NA	80079272	80091349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079308_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_18323.known	chr10	+	878	5	FSM	ENSG00000133678.14	ENST00000483732.5	878	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	97.6140358759948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGTTAGTCAGTTTTTTC	80078870	False	NA	NA	False	NA	NA	NA	80079327	80091050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079693_80081639_80081735_80081840_80081945_80082144_80082205_80090796
transcript_18326.nic	chr10	+	497	4	ISM	ENSG00000133678.14	ENST00000372277.7	366	5	19	3971	0	0	5prime_fragment	FALSE	canonical	3	29	junction_3	87.2900656177755	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATAAATTTACTTTCCAAAA	80075689	True	NA	NA	False	ACTAAA	-24	NA	80078664	80086441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_80078787_80081840_80081945_80082144_80082205_80086230
transcript_18328.known	chr10	+	2041	4	FSM	ENSG00000133678.14	ENST00000372281.8	2041	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	19.5959179422654	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAATGCTTTTCTTGTAT	80075689	True	NA	16	True	AATAAA	-20	NA	80078664	80092551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80078787_80081840_80081945_80082144_80082205_80090796
transcript_18333.known	chr10	+	1963	4	FSM	ENSG00000133678.14	ENST00000467529.5	1963	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	94.4504573249325	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCTTGTATTTGTCA	80078812	True	NA	22	True	AATAAA	-26	NA	80079269	80092557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80079308_80081840_80081945_80082144_80082205_80090796
transcript_18337.known	chr10	+	776	4	FSM	ENSG00000189129.14	ENST00000372263.4	776	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	5.35412613473634	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCCTATGAAGTGAAAT	80132502	False	NA	NA	False	ATTAAA	-25	NA	80132729	80145359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80132827_80142081_80142180_80144222_80144344_80144899
transcript_18338.known	chr10	-	6734	16	FSM	ENSG00000122359.18	ENST00000422982.8	6734	16	0	0	0	0	multi-exon	TRUE	canonical	2	204	junction_15	69.7564015381782	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-80198054	True	NA	-2	True	AATAAA	-18	NA	80205537	80150888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80176106_80176156_80205342
transcript_18339.known	chr10	-	6720	15	FSM	ENSG00000122359.18	ENST00000372231.7	6720	15	0	0	0	0	multi-exon	FALSE	canonical	2	170	junction_14	70.4796974674412	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTTTGTTGTGTTTTAGC	-80198089	True	NA	-2	True	AATAAA	-18	NA	80205572	80150888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80155913_80157640_80157764_80157966_80158026_80159099_80159196_80161934_80162029_80163348_80163406_80163533_80163614_80164052_80164144_80166083_80166198_80166889_80166985_80167225_80167314_80168968_80169359_80170799_80170916_80172806_80172870_80205342
transcript_1834.known	chr1	-	2796	25	FSM	ENSG00000171824.14	ENST00000376936.9	2796	25	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_10	47.9402840347586	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089838	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_18342.known	chr10	-	3384	9	FSM	ENSG00000151224.13	ENST00000372213.8	3384	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	3.82222121285516	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTATGCTTAGTTATTCTC	-80289521	True	NA	0	True	AATAAA	-18	NA	80289658	80271819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_80273884_80274519_80274654_80275016_80275200_80276375_80276595_80280172_80280317_80280679_80280793_80283915_80284039_80285511_80285590_80289332
transcript_18348.known	chr10	+	1863	5	FSM	ENSG00000133665.13	ENST00000256039.3	1863	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	12.0908022893437	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTTTTGTGACTGGCT	80356536	True	NA	7	True	TATAAA	-18	NA	80356780	80368073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80356826_80357892_80358046_80362434_80362591_80362950_80363074_80366687
transcript_18351.known	chr10	+	1173	4	FSM	ENSG00000133665.13	ENST00000444807.6	1173	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.9124245031395	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGAAAGAGAAAAGACAA	NA	False	NA	NA	False	GGGGCT	-19	NA	80356296	80367281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80356597_80362434_80362591_80362950_80363074_80366687
transcript_1836.nnic	chr1	-	2753	24	NIC	ENSG00000171824.14	novel	2796	25	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	3	38	junction_9	130.843995768753	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089874	True	NA	NA	False	ATTAAA	-17	NA	11099905	11066617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11073933_11074009_11074230_11074327_11076841_11076949_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_1837.known	chr1	-	2721	24	FSM	ENSG00000171824.14	ENST00000304457.11	2721	24	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	135.895726177076	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089838	True	NA	NA	False	ATTAAA	-17	NA	11099869	11066617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11066749_11068007_11068085_11068644_11068707_11069558_11069731_11070899_11070974_11072086_11072172_11074230_11074327_11076841_11076949_11077364_11077444_11077600_11077652_11079710_11079823_11080498_11080550_11080763_11080913_11081081_11081239_11082687_11082879_11087447_11087592_11087799_11087911_11088122_11088199_11090553_11090669_11091013_11091180_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_18380.known	chr10	+	5801	6	FSM	ENSG00000122378.14	ENST00000606162.6	5801	6	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	67.8539608276481	811	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTTGTCAGTGATT	80403694	True	NA	11	True	AATAAA	-25	NA	80408550	80437115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80408644_80420465_80420646_80422416_80422509_80425865_80426007_80427331_80427497_80431985
transcript_18381.known	chr10	+	16183	9	FSM	ENSG00000108219.15	ENST00000429989.7	16183	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	27.617928959283	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAAGTGTCATTTTTCTCC	80454096	False	NA	NA	False	TATAAA	-16	NA	80454165	80533123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80454372_80489216_80489315_80504727_80504779_80507227_80507375_80509300_80509472_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_18383.known	chr10	+	808	6	FSM	ENSG00000108219.15	ENST00000481124.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	86.0850741998867	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTATGTGGGAGTGGT	80451305	True	NA	NA	False	NA	NA	NA	80454264	80518216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_80454372_80489216_80489315_80512143_80512270_80514018_80514064_80516203_80516324_80517904
transcript_18384.known	chr10	-	3509	2	FSM	ENSG00000287358.1	ENST00000666227.1	3509	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTAGTTCTAACCATAC	-81875121	False	NA	NA	False	AATAAA	-45	NA	81875133	81870777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_81873502_81874348
transcript_18391.nnic	chr10	+	1666	6	NIC	ENSG00000229404.6	novel	2685	6	NA	NA	0	1539	combination_of_known_splicesites	TRUE	canonical	0	0	junction_5	3.77359245282264	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTATGGTCAGTTCTCT	84279742	True	NA	NA	False	AATACA	-14	NA	84279967	84292158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_84280066_84288223_84288421_84288593_84288781_84288974_84289045_84289518_84289881_84291406
transcript_18394.known	chr10	+	821	1	FSM	ENSG00000178429.9	ENST00000389400.4	821	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	163	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCAGACTTCAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	84560442	84561263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_84560400_84561300
transcript_18395.known	chr10	+	3058	2	FSM	ENSG00000227896.2	ENST00000428940.2	3058	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGCATGTTGTGGTTAT	86521665	True	NA	NA	False	AATAAA	-14	NA	86521944	86525101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86522410_86522508
transcript_18403.nnic	chr10	+	2636	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-4042	0	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	22.0181743112366	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	NA	False	NA	16	True	AATAAA	-17	NA	86954556	86963258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_86956426_86958587_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_18406.nnic	chr10	+	1061	6	NNC	ENSG00000173267.14	novel	756	5	NA	NA	-2414	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	37.0059454682623	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86955939	True	NA	16	True	AATAAA	-17	NA	86956184	86963258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_86956426_86958534_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_18418.known	chr10	+	627	3	FSM	ENSG00000148671.14	ENST00000372013.8	627	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTGCCCCTCTCCCGCC	86968426	False	NA	NA	False	NA	NA	NA	86968481	86970915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86968606_86970199_86970263_86970475
transcript_18419.known	chr10	+	357	3	FSM	ENSG00000188100.9	ENST00000343959.5	357	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGCGCTGGATTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	87020293	87024730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87020398_87022313_87022377_87024540
transcript_18420.known	chr10	+	229	2	FSM	ENSG00000148671.14	ENST00000416348.1	229	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTGACACCTTCTCTG	86968376	False	NA	NA	False	NA	NA	NA	86968431	86970530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86968606_86970475
transcript_18421.known	chr10	+	756	5	FSM	ENSG00000173267.14	ENST00000372017.4	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	5.30919014539883	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86958211	True	NA	16	True	AATAAA	-17	NA	86958598	86963258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86958819_86959632_86959675_86960000_86960129_86962603_86962676_86962964
transcript_18422.known	chr10	+	794	4	FSM	ENSG00000173267.14	ENST00000483064.1	794	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	4.49691252107735	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGCTTCCTCTGGGTGC	86959319	True	NA	16	True	AATAAA	-17	NA	86959374	86963258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_86959675_86960000_86960129_86962603_86962676_86962964
transcript_18423.known	chr10	-	3300	13	FSM	ENSG00000148672.10	ENST00000277865.5	3300	13	0	0	0	0	multi-exon	TRUE	canonical	3	581	junction_10	43.7653941170672	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTTGAGAAAGAGGCTCT	-87086218	True	NA	NA	False	ATTAAA	-15	NA	87094843	87050201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87051871_87053341_87053405_87057690_87057783_87059149_87059274_87060160_87060242_87060687_87060826_87060914_87061053_87062655_87062836_87068062_87068158_87074550_87074615_87075967_87076024_87076575_87076657_87094324
transcript_18426.known	chr10	+	3601	10	FSM	ENSG00000122376.12	ENST00000298786.5	3601	10	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	28.3783955383904	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	87092226	True	NA	6	True	AATAAA	-17	NA	87095205	87191465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_18432.known	chr10	+	3402	9	FSM	ENSG00000122376.12	ENST00000298784.5	3402	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	50.8226081581809	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAGCTTCTTTTACTCTG	87092216	True	NA	4	True	AATAAA	-15	NA	87095195	87191463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87095249_87096933_87096990_87151349_87152880_87158047_87158156_87170477_87170673_87170839_87170975_87180074_87180304_87187084_87187201_87190483
transcript_18437.nnic	chr10	+	2218	8	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	61808	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	70.8911208855394	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGCTTCTTTTACTCTGTG	87156921	True	NA	6	True	AATAAA	-17	NA	87157013	87191465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_87157260_87158047_87158156_87170477_87170673_87170839_87170975_87175888_87176096_87180074_87180304_87187084_87187201_87190483
transcript_18441.nnic	chr10	+	527	3	NNC	ENSG00000122376.12	novel	3402	9	NA	NA	-19	-29444	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	84.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCTACATTCATGAGT	87092197	True	NA	NA	False	NA	NA	NA	87095176	87122190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_87095249_87096933_87096990_87121791
transcript_18453.known	chr10	-	6096	7	FSM	ENSG00000223482.9	ENST00000667520.2	6154	7	58	0	5	0	multi-exon	FALSE	canonical	3	11	junction_4	95.3496489534993	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAATCTCTTTCATTTT	-87342287	False	NA	NA	False	TTTAAA	-42	NA	87342335	87240256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
transcript_18460.nnic	chr10	-	839	6	NIC	ENSG00000223482.9	novel	5671	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	95.8611495862636	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTTGTTTTTATTTA	-87342388	False	NA	-9	True	AATAAA	-20	NA	87342436	87208167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_87208513_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18462.known	chr10	-	782	6	FSM	ENSG00000223482.9	ENST00000664664.1	782	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.141351440407	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGCAGTTTTGTTTTTAT	-87342331	False	NA	-12	True	AATAAA	-17	NA	87342379	87208170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87208510_87288441_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
transcript_18464.known	chr10	-	855	6	FSM	ENSG00000223482.9	ENST00000433530.7	916	6	61	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	95.2289871835252	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGCTCAAAAAGATTGTCCA	-87342297	False	NA	NA	False	ATTAAA	-40	NA	87342345	87238397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87238850_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18467.known	chr10	-	876	6	FSM	ENSG00000223482.9	ENST00000433920.5	876	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	97.7723887403801	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCTCTATTGTTTAAAATT	-87342564	False	NA	1	True	AATAAA	-18	NA	87342612	87238666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87238873_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18469.known	chr10	-	6174	6	FSM	ENSG00000223482.9	ENST00000663113.1	6174	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	87.5588944653826	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAAAGTTGTTGAGTGA	-87342388	False	NA	NA	False	ACTAAA	-35	NA	87342436	87240175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87245856_87246114_87246213_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18475.known	chr10	-	511	5	FSM	ENSG00000223482.9	ENST00000663644.1	511	5	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_1	105.920666066637	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATCTGAAAACAATGTC	-87342318	False	NA	NA	False	AATAAA	-20	NA	87342366	87207623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87207809_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18477.nnic	chr10	-	741	5	FSM	ENSG00000223482.9	ENST00000687947.1	1259	5	-28	546	0	0	multi-exon	TRUE	canonical	3	10	junction_1	103.398198727057	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTTTTGTTTTTATTTA	-87342388	False	NA	-9	True	AATAAA	-20	NA	87342436	87208167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87208513_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18479.known	chr10	-	532	5	FSM	ENSG00000223482.9	ENST00000666515.2	536	5	0	4	0	-1	multi-exon	FALSE	canonical	2	7	junction_1	104.658969993021	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTCTCTATTGTTTAA	-87342345	False	NA	-3	True	AATAAA	-14	NA	87342393	87238670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87238850_87288441_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18481.known	chr10	-	933	5	FSM	ENSG00000223482.9	ENST00000668676.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	110.975222459791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342338	False	NA	NA	False	ATTAAA	-24	NA	87342386	87287958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87307956_87308061_87326629_87326673_87336785_87336890_87342241
transcript_18482.known	chr10	-	867	5	FSM	ENSG00000223482.9	ENST00000413722.6	867	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	119.834260543469	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342302	False	NA	NA	False	ATTAAA	-24	NA	87342350	87287958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87326629_87326673_87330891_87330966_87336785_87336890_87342241
transcript_18483.known	chr10	-	1014	5	FSM	ENSG00000223482.9	ENST00000655272.2	1039	5	25	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	115.569243313262	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342318	False	NA	NA	False	ATTAAA	-24	NA	87342366	87287958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_18485.known	chr10	-	1446	5	FSM	ENSG00000223482.9	ENST00000417860.7	2036	5	0	590	0	-590	multi-exon	FALSE	canonical	3	27	junction_3	99.5866456910765	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGCCACTTCATGTAACA	-87342343	False	466	NA	False	AATAAA	-17	NA	87342391	87319255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87320200_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_18493.known	chr10	-	4023	4	FSM	ENSG00000223482.9	ENST00000654503.2	4041	4	18	0	1	0	multi-exon	FALSE	canonical	3	201	junction_2	28.9405520948643	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAACCATTTCACAATT	-87342340	False	NA	NA	False	NA	NA	NA	87342388	87284766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87326629_87326673_87336785_87336890_87342241
transcript_18495.known	chr10	-	1295	4	FSM	ENSG00000223482.9	ENST00000660726.2	1835	4	16	524	0	-522	multi-exon	FALSE	canonical	3	48	junction_1	91.3831980666517	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTAGCTTTGCAACATC	-87342329	False	466	NA	False	AATGAA	-4	NA	87342377	87319187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87320200_87326629_87326673_87336785_87336890_87342241
transcript_18499.known	chr10	-	535	3	FSM	ENSG00000223482.9	ENST00000667985.2	734	3	8	191	0	126	multi-exon	FALSE	canonical	3	201	junction_1	32.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGTATATGTTTGTGT	-87342341	False	NA	NA	False	CATAAA	-15	NA	87342389	87326389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87326673_87336785_87336890_87342241
transcript_18500.known	chr10	-	3270	3	FSM	ENSG00000223482.9	ENST00000662586.1	3270	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	125.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTATTTACGTATGA	-87342506	False	NA	NA	False	AATAAA	-10	NA	87342554	87331961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87334815_87336785_87336890_87342241
transcript_18502.known	chr10	-	924	5	FSM	ENSG00000223482.9	ENST00000660454.1	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	105.000892853347	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCTCCAAAATCAGACAAC	-87342282	False	NA	NA	False	AATAAA	-31	NA	87342330	87307577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87308061_87326629_87326673_87330891_87331097_87336785_87336890_87342241
transcript_18503.known	chr10	-	1418	5	FSM	ENSG00000223482.9	ENST00000653080.1	1418	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	118.499736286626	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTGCTTGTACAGCCT	-87342329	False	466	NA	False	ATTAAA	-24	NA	87342377	87287958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87288496_87291935_87292534_87326629_87326673_87336785_87336890_87342241
transcript_18507.known	chr10	+	2470	5	FSM	ENSG00000107789.16	ENST00000371996.9	2470	5	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	35.4568399607184	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGACTCACCTGGCAAT	87502449	True	NA	88	True	AATACA	-38	NA	87504892	87553461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87505553_87508335_87508534_87513123_87513222_87521035_87521170_87552081
transcript_18511.known	chr10	+	2183	3	FSM	ENSG00000107789.16	ENST00000371994.8	2183	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	175.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCAGGACTTTTCTCTTC	87502431	True	NA	15	True	AATAAA	-20	NA	87504874	87553388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87505553_87508335_87508534_87552081
transcript_18512.known	chr10	+	3699	13	FSM	ENSG00000198682.13	ENST00000456849.2	3699	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	51.8737784327389	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	87659228	True	NA	15	True	AATAAA	-15	NA	87659877	87747705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87721755_87721771_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_18515.known	chr10	+	3949	12	FSM	ENSG00000198682.13	ENST00000361175.8	3949	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	17.7768537409076	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGAGTTTTTTCTGCCTG	87659369	False	NA	15	True	AATAAA	-15	NA	87659612	87747705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87660009_87709195_87709314_87713074_87713311_87714043_87714183_87714744_87714864_87714984_87715099_87715731_87715844_87727283_87727490_87741234_87741371_87743372_87743642_87745001_87745232_87745831
transcript_18526.known	chr10	-	4640	10	FSM	ENSG00000138138.14	ENST00000308448.11	4640	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_9	76.9617509618324	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-87811780	True	NA	NA	False	ATTAAA	-19	NA	87818160	87751511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87817794
transcript_18527.known	chr10	-	4334	10	FSM	ENSG00000138138.14	ENST00000680024.1	4334	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_9	56.9179613214287	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTAAAATGTGATTGTC	-87811846	True	NA	NA	False	ATTAAA	-19	NA	87818226	87751511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_1854.nnic	chr1	-	759	6	NIC	ENSG00000171824.14	novel	2721	24	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	270.219614388001	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATTCCTGACTTTTATT	-11089874	True	NA	NA	False	ATTAAA	-17	NA	11099905	11066617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_11066749_11068007_11068085_11091492_11091598_11095757_11095882_11098019_11098157_11099720
transcript_18548.known	chr10	+	470	2	FSM	ENSG00000223820.5	ENST00000415212.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCAGCTTGTGCCTTT	87818311	False	NA	NA	False	NA	NA	NA	87818424	87819081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_87818715_87818901
transcript_1855.known	chr1	+	440	2	FSM	ENSG00000230337.2	ENST00000435388.2	685	2	245	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATACTTGCTTTTCACT	11099516	False	NA	NA	False	AATAAA	-21	NA	11099674	11102100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11099815_11101800
transcript_18551.nic	chr10	-	1389	2	ISM	ENSG00000138138.14	ENST00000681308.1	4045	11	-85	61478	-72	-28804	5prime_fragment	FALSE	canonical	3	186	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAACTAGTTTGAGT	-87818278	False	NA	NA	False	TTTAAA	-10	NA	87818298	87813355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_87814613_87818166
transcript_18553.known	chr10	-	4045	11	FSM	ENSG00000138138.14	ENST00000681308.1	4045	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	145.80617270884	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAGAAAATAAATTGGATG	-87811833	True	NA	-31	True	NA	NA	NA	87818213	87751877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_87754808_87756788_87756923_87767672_87767724_87770951_87771042_87776320_87776428_87784469_87784671_87789039_87789130_87790309_87790431_87792656_87792756_87814437_87814613_87818166
transcript_18556.nnic	chr10	+	330	2	Antisense	novelGene_ENSG00000227905.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTGTAAGTTAAATTTAG	NA	False	NA	NA	False	ATTAAA	-17	NA	88042666	88058177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_88042813_88057993
transcript_1856.known	chr1	+	487	2	FSM	ENSG00000230337.2	ENST00000447600.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCCACCCATTAAGTC	11099516	False	NA	NA	False	AATACA	-2	NA	11099674	11102051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11099911_11101800
transcript_18560.known	chr10	-	2409	7	FSM	ENSG00000184719.12	ENST00000331772.9	2409	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	5.43905629069357	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGGTTAATGTCACTTA	-88582946	True	NA	NA	False	AATAAA	-24	NA	88583318	88284101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88285507_88314465_88314642_88362551_88362726_88572902_88573062_88581566_88581710_88582201_88582308_88583072
transcript_18562.nnic	chr10	-	1354	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-145	-859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.996363335788	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCTTCGGATGTGT	NA	False	NA	-4	True	AATAAA	-26	NA	88583477	88284960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362659_88523215_88523230_88582201_88582308_88583072
transcript_18565.nnic	chr10	-	1390	6	NNC	ENSG00000184719.12	novel	2409	7	NA	NA	-145	-859	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	21.996363335788	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTAAGTCTTCGGATGTGT	NA	False	NA	-4	True	AATAAA	-26	NA	88583477	88284960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_88285507_88314465_88314642_88362551_88362695_88523215_88523230_88582201_88582308_88583072
transcript_18571.known	chr10	-	525	4	FSM	ENSG00000184719.12	ENST00000437752.2	525	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.43650214343336	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGTCTGCTTTTGCCAT	-88583091	False	NA	NA	False	NA	NA	NA	88583190	88572903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88573062_88581566_88581710_88582201_88582308_88583072
transcript_18572.known	chr10	+	2021	11	FSM	ENSG00000138134.12	ENST00000371926.8	2021	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	7.07389567353096	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTCTTGTATTTATAGAG	88879713	True	NA	7	True	AATAAA	-16	NA	88880244	88923487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88880639_88901655_88901739_88905442_88905661_88908701_88908778_88910915_88911012_88913100_88913459_88914533_88914659_88916679_88916818_88921282_88921396_88922336_88922437_88923167
transcript_18575.known	chr10	+	3696	9	FSM	ENSG00000026103.23	ENST00000652046.1	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	5.02493781056044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTGCTGTTGATTAT	88990767	True	NA	NA	False	ATTAAA	-15	NA	88990797	89017059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89010752_89010816_89011998_89012082_89013342_89013368_89014118
transcript_18578.nic	chr10	-	1536	9	Fusion	ENSG00000286116.1_ENSG00000107796.13	novel	1349	9	NA	NA	37	0	multi-exon	FALSE	canonical	1	2	junction_8	5.93717104351896	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCGTTGGCCTCCGA	-88991087	True	NA	0	True	AATAAA	-22	NA	88991251	88935073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr10_-_88935367_88938060_88938243_88939506_88939699_88941228_88941391_88941784_88941870_88943796_88943908_88947257_88947387_88948801_88948954_88991021
transcript_18579.known	chr10	+	1044	8	FSM	ENSG00000026103.23	ENST00000357339.6	1044	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	6.6944997222057	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTGAAAAACAACAAATTCA	88990756	False	NA	NA	False	AATGAA	-19	NA	88990777	89014450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_88990907_89003028_89003195_89007699_89007838_89008888_89008998_89010538_89010601_89011998_89012082_89013342_89013368_89014118
transcript_1858.known	chr1	+	3654	2	FSM	ENSG00000120942.14	ENST00000376810.6	3654	2	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	0	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAATGGTCTGGCTTCTGGT	11271610	True	NA	14	True	ATTAAA	-23	NA	11273197	11288434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11274061_11285643
transcript_18582.known	chr10	-	1349	9	FSM	ENSG00000107796.13	ENST00000224784.10	1349	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	6.45658578507248	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGCGTTGGCCTCCGA	NA	False	NA	0	True	AATAAA	-22	NA	88952773	88935073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_88935367_88938060_88938243_88939506_88939699_88941228_88941391_88941784_88941870_88943796_88943908_88947257_88947387_88948801_88948954_88952730
transcript_18588.known	chr10	-	2496	10	FSM	ENSG00000107798.18	ENST00000336233.10	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_9	25.7552583627758	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGTGTGTATGTTTTTT	-89247267	True	NA	-6	True	AATAAA	-26	NA	89251775	89213571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89245675_89245794_89247537_89247650_89251736
transcript_18590.known	chr10	-	2527	8	FSM	ENSG00000107798.18	ENST00000456827.5	2527	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	136.141582965106	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGAATTGTGTGTATGTTT	-89252026	False	NA	-9	True	AATAAA	-23	NA	89252039	89213574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89215062_89215937_89216010_89222510_89222583_89223683_89223831_89225091_89225229_89226894_89227005_89228199_89228399_89251736
transcript_18595.nnic	chr10	+	532	3	NIC	ENSG00000232110.9	novel	495	3	NA	NA	-807	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTGAGCATCTT	89284950	True	NA	NA	False	AATAAA	-18	NA	89284968	89292125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_89285265_89287144_89287242_89291986
transcript_18597.nic	chr10	+	437	2	ISM	ENSG00000232110.9	ENST00000680136.1	438	3	1192	-1	-809	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGTTTTTGAGCATCTT	89284948	True	NA	NA	False	AATAAA	-18	NA	89284966	89292125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_89285265_89291986
transcript_18599.known	chr10	+	4302	2	FSM	ENSG00000185745.10	ENST00000371804.4	4302	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCTGCACTGCT	89392501	True	NA	NA	False	AATAAA	-16	NA	89392622	89406487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89392718_89402280
transcript_18601.known	chr10	+	4029	2	FSM	ENSG00000152778.10	ENST00000371795.5	4029	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTATATTGTCCTGCACCT	NA	False	NA	NA	False	AATAAA	-17	NA	89414567	89420997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89414804_89417204
transcript_1861.known	chr1	+	5265	21	FSM	ENSG00000204624.8	ENST00000294484.7	5265	21	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_18	3.73195659138742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGCTGCTGTTAATACGA	11478228	True	NA	4	True	ATTAAA	-17	NA	11479154	11537551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11479373_11500989_11502089_11502677_11502898_11514389_11514527_11515368_11515504_11516000_11516162_11517462_11517603_11519354_11519504_11519718_11519881_11520686_11520849_11523941_11524056_11525175_11525313_11526650_11526836_11529555_11529687_11529786_11529960_11530906_11531034_11531564_11531711_11534380_11534541_11535010_11535125_11535477_11535645_11536323
transcript_18610.nnic	chr10	-	312	2	NIC	ENSG00000152779.14	novel	4655	8	NA	NA	-30	7	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACCATGGCAAAAGTAA	-89534793	True	NA	NA	False	AAAAAG	-1	NA	89535624	89462495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_89462625_89535441
transcript_18611.known	chr10	-	4655	8	FSM	ENSG00000152779.14	ENST00000371790.5	4655	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	20.0479018190667	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAAGACATTTTTCCC	-89534763	True	NA	-5	True	AATAAA	-20	NA	89535594	89430298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89433327_89436059_89436320_89438603_89439184_89441107_89441252_89443755_89443860_89462378_89462625_89534500_89534641_89535441
transcript_18612.known	chr10	-	2703	7	FSM	ENSG00000152782.18	ENST00000342512.3	2703	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	69.4686180148194	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-89643877	False	NA	-13	True	AATAAA	-18	NA	89643887	89582987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89593812_89593990_89599251_89599506_89611695_89612049_89643696
transcript_18614.known	chr10	-	2513	6	FSM	ENSG00000152782.18	ENST00000322191.10	2513	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	95.1659603009395	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTGTATATGTTA	-89643864	False	NA	-13	True	AATAAA	-18	NA	89643874	89582987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89584466_89588651_89588778_89593196_89593321_89599251_89599506_89611695_89612049_89643696
transcript_18615.nnic	chr10	+	615	5	NNC	ENSG00000232936.6	novel	2069	4	NA	NA	-1158	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	4.18330013267038	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	89643818	True	NA	NA	False	ATTAAA	-16	NA	89644113	89650667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_89644200_89648922_89649022_89649146_89649289_89650058_89650232_89650552
transcript_1862.known	chr1	+	910	2	FSM	ENSG00000204624.8	ENST00000423056.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTATATATCCTCTGCAT	11478239	True	NA	NA	False	NA	NA	NA	11479165	11481960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11479373_11481257
transcript_18620.nnic	chr10	+	473	4	NNC	ENSG00000232936.6	novel	2069	4	NA	NA	-1158	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	4.49691252107735	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	89643818	True	NA	NA	False	ATTAAA	-16	NA	89644113	89650667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_89644200_89648922_89649022_89650058_89650232_89650552
transcript_18622.known	chr10	+	563	4	FSM	ENSG00000232936.6	ENST00000454174.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.09120616516523	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	89645192	True	NA	NA	False	ATTAAA	-16	NA	89645281	89650667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89645458_89648922_89649022_89650058_89650232_89650552
transcript_18623.known	chr10	+	2069	4	FSM	ENSG00000232936.6	ENST00000660192.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.90668171555645	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCAAACATGCCTAAGTC	89645182	True	NA	NA	False	NA	NA	NA	89645271	89652144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89645500_89648922_89648999_89650058_89650232_89650552
transcript_18624.known	chr10	+	445	4	FSM	ENSG00000232936.6	ENST00000451733.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.90668171555645	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGTAGGATAAATTTATA	89645352	False	NA	NA	False	ATTAAA	-16	NA	89645441	89650667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89645500_89648922_89649022_89650058_89650232_89650552
transcript_18626.known	chr10	-	572	4	FSM	ENSG00000152782.18	ENST00000488482.1	572	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGGTGTTTCTATTTG	-89643946	False	NA	49	True	AATAAA	-20	NA	89643956	89625694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_89625854_89626192_89626250_89626536_89626633_89643696
transcript_18633.nic	chr10	-	1252	2	NIC	ENSG00000152782.18	novel	572	4	NA	NA	-52	2	intron_retention	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTGTTTCTATTTGTT	-89643998	False	NA	51	True	AATAAA	-22	NA	89644008	89625692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_89626633_89643696
transcript_18634.nnic	chr10	-	1165	2	NNC	ENSG00000152782.18	novel	2513	6	NA	NA	11	-8455	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTGGTGGTGTTAGAT	-89643935	False	NA	-8	True	AATAAA	-13	NA	89643945	89634149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_89635066_89643696
transcript_18638.nic	chr10	+	3343	20	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-36	36743	-16	27106	5prime_fragment	FALSE	canonical	3	195	junction_17	26.078827871626	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTTATACAGCAGCTGAAA	89701562	False	NA	NA	False	CATAAA	-32	NA	89701573	89738196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412_89726522_89727855_89727897_89729127_89729248_89732902_89733057_89737386
transcript_18640.nic	chr10	+	2185	16	ISM	ENSG00000138182.15	ENST00000260753.8	6306	33	-28	48443	-8	15406	5prime_fragment	FALSE	canonical	3	207	junction_13	24.0994236906658	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGTTAAAAAAGAGAGA	89693320	True	NA	27	True	ATTAAA	-43	NA	89701581	89726496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963_89724104_89725019_89725159_89726412
transcript_18642.nic	chr10	+	1948	14	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	-74	50911	-74	12933	5prime_fragment	TRUE	canonical	3	207	junction_13	25.2530389523986	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACCTTGGAATTTAAAAT	89701504	True	NA	NA	False	GATAAA	-17	NA	89701515	89724023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960_89711146_89714046_89714084_89714954_89715183_89716435_89716548_89717423_89717496_89717575_89717723_89718709_89718873_89719418_89719707_89723963
transcript_18649.nic	chr10	+	716	6	ISM	ENSG00000138182.15	ENST00000371728.8	6441	33	-4	63844	-4	0	5prime_fragment	FALSE	canonical	3	210	junction_2	25.772853935876	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	89693324	True	NA	NA	False	NA	NA	NA	89701585	89711090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_89701681_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_18652.known	chr10	+	660	6	FSM	ENSG00000138182.15	ENST00000447580.1	660	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	103.404835476877	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAGAGAAAGAAGAAATTG	89693417	True	NA	NA	False	NA	NA	NA	89701678	89711090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_89701718_89705293_89705442_89709166_89709254_89709344_89709462_89709926_89710066_89710960
transcript_18675.known	chr10	+	2332	11	FSM	ENSG00000148688.14	ENST00000371703.8	2332	11	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	28.2283545393634	2101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCATGACCAGGTGAAATT	90862470	True	NA	12	True	AATAAA	-28	NA	90871973	90902191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312_90896393_90900569
transcript_18676.known	chr10	+	1466	10	FSM	ENSG00000148688.14	ENST00000487998.5	1466	10	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_4	27.1897765827026	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGTTTTCATTTGGAG	90862469	True	NA	12	True	AATAAA	-13	NA	90871972	90900762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_90872069_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90895484_90895879_90895918_90896312_90896393_90900569
transcript_18677.known	chr10	+	767	10	FSM	ENSG00000148688.14	ENST00000277882.7	767	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	197.686870493293	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCAAGTTCTTCCAGTA	90862479	True	NA	NA	False	NA	NA	NA	90871982	90896392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_90872135_90874868_90874925_90875557_90875615_90876023_90876099_90879062_90879135_90885811_90885902_90894774_90894892_90895453_90895484_90895879_90895918_90896312
transcript_18679.known	chr10	-	1790	9	FSM	ENSG00000148677.7	ENST00000371697.4	1790	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.330718913883074	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTAAGTCCTTCTATAAG	-90920972	True	NA	NA	False	AATAAA	-18	NA	90921087	90912095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_90912977_90915542_90915642_90915781_90915881_90916170_90916270_90917731_90917831_90918864_90918973_90919130_90919269_90920168_90920349_90921000
transcript_18680.known	chr10	+	7149	10	FSM	ENSG00000180628.15	ENST00000336126.6	7149	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	16.0746714345393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGTAGCAAATTTTATT	91219900	True	NA	86	True	ATTAAA	-21	NA	91220662	91284337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91220837_91222688_91222984_91240483_91240581_91248504_91248561_91248664_91248725_91251291_91251441_91261325_91261425_91264430_91264521_91271637_91271698_91278268
transcript_18681.known	chr10	+	973	3	FSM	ENSG00000180628.15	ENST00000490164.1	973	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTGTGTATTTTTCCT	91220020	True	NA	NA	False	AATAAA	-35	NA	91220782	91227960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91220837_91222688_91222984_91227336
transcript_18684.known	chr10	+	395	3	FSM	ENSG00000165338.17	ENST00000631422.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	14	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAAAGACTTTCAGTAA	91408992	True	NA	NA	False	AATGAA	-45	NA	91409279	91460549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91409422_91425280_91425411_91460426
transcript_18685.known	chr10	-	2541	2	FSM	ENSG00000119938.9	ENST00000238994.6	2541	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGAGTATATTTTCTTT	-91632860	True	NA	2	True	AATAAA	-15	NA	91633071	91628441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91630867_91632955
transcript_18691.known	chr10	-	609	2	FSM	ENSG00000228701.3	ENST00000432246.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTAGAGCCTTCAGAGAG	-91798139	False	NA	-100	True	AAGAAA	-8	NA	91798196	91782935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91783161_91797812
transcript_18692.known	chr10	-	377	2	FSM	ENSG00000228701.3	ENST00000432938.1	377	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACCTAGTTTGTGGTCTT	-91798076	True	NA	-3	True	AATAAA	-16	NA	91798291	91782838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91783161_91798236
transcript_18693.nnic	chr10	-	722	3	NNC	ENSG00000174721.10	novel	2553	2	NA	NA	-67	-1176	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	345	835	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGCCAGGTTGAATCAA	-91905610	False	NA	-18	True	ATTAAA	-23	NA	91909553	91907759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_91908265_91908986_91909048_91909397
transcript_18694.known	chr10	+	571	2	FSM	ENSG00000272817.1	ENST00000610263.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGATGATTCCTTGGAA	NA	False	NA	15	True	AATAAA	-16	NA	91908130	91909348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_91908250_91908896
transcript_18695.known	chr10	-	2553	2	FSM	ENSG00000174721.10	ENST00000311575.6	2553	2	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTGTGTTGCAACC	-91905543	True	NA	-1	True	TATAAA	-19	NA	91909486	91906583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_91909048_91909397
transcript_18698.known	chr10	+	3922	6	FSM	ENSG00000198060.10	ENST00000358935.3	3922	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_2	20.2780669690185	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAGGTGTACTTTGTTAAA	92289369	True	NA	7	True	AATAAA	-15	NA	92291166	92353964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92291530_92311134_92311338_92340672_92340804_92349348_92349533_92349670_92349838_92351090
transcript_18703.known	chr10	-	5894	25	FSM	ENSG00000119912.18	ENST00000265986.11	5894	25	0	0	0	0	multi-exon	TRUE	canonical	3	247	junction_11	20.5385393156919	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTCTCAGGGACGATGT	-92570839	True	NA	NA	False	NA	NA	NA	92574093	92451683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_92454540_92455575_92455644_92456358_92456432_92461190_92461253_92463730_92464004_92465675_92465844_92468878_92468991_92470253_92470346_92474840_92474962_92475883_92475995_92479276_92479422_92483254_92483338_92487195_92487319_92490492_92490596_92504793_92504898_92506441_92506523_92507574_92507667_92508112_92508206_92508727_92508891_92510049_92510163_92514919_92515043_92531747_92531918_92534577_92534786_92537365_92537551_92573921
transcript_18705.known	chr10	+	5010	22	FSM	ENSG00000138160.7	ENST00000677720.1	5010	22	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_15	72.3039063625434	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGCTTGCTCCATAATT	92581090	True	NA	35	True	AATAAA	-45	NA	92593129	92655393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92593453_92606264_92606398_92606618_92606717_92607158_92607238_92609019_92609206_92609384_92609510_92613039_92613131_92613376_92613620_92616736_92616833_92621384_92621474_92628807_92628896_92630175_92630365_92632485_92632694_92633622_92633796_92637183_92637310_92637390_92637546_92639793_92639901_92645362_92645643_92648211_92648435_92649834_92649987_92650400_92650518_92653664
transcript_18713.known	chr10	+	808	3	FSM	ENSG00000152804.11	ENST00000492654.3	808	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAAACTGGATTTAGG	92691749	False	NA	NA	False	GATAAA	-42	NA	92692031	92694788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92692547_92692701_92692753_92694546
transcript_18715.known	chr10	+	3564	22	FSM	ENSG00000138190.17	ENST00000260762.10	3564	22	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_18	6.46532702303134	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTACTATTTTGTCTAT	92848024	True	NA	14	True	ATTAAA	-24	NA	92848519	93059490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757_92915914_92919981_92920051_92928338_92928423_92934143_92934191_92934309_92934431_92935813_92935886_92940726_92940825_92948273_92948380_92952272_92952383_92954629_92954742_92955579_92955715_92974052_92974233_92997473_92997616_93014193_93014268_93056923_93057037_93058222
transcript_18718.nic	chr10	+	1003	7	ISM	ENSG00000138190.17	ENST00000443748.6	3310	18	-1	143463	-1	0	5prime_fragment	FALSE	canonical	3	30	junction_5	2.85287379477061	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCAGAGTCAAAATGGAGT	92847971	True	NA	NA	False	AATAAA	-17	NA	92848466	92916030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598_92899645_92909426_92909632_92915757
transcript_18719.known	chr10	+	2714	5	FSM	ENSG00000138190.17	ENST00000371543.5	2714	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	2.77263412660235	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGAGCGTGGTGGCGCG	92847989	True	NA	NA	False	NA	NA	NA	92848484	92901851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_92848635_92893348_92893521_92894793_92894842_92894929_92895021_92899598
transcript_18724.known	chr10	-	442	2	FSM	ENSG00000226425.1	ENST00000444965.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCGAGAGAACAAGTGCGC	NA	False	NA	NA	False	ATTAAA	-19	NA	93060426	93059662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93059906_93060227
transcript_18726.known	chr10	+	2245	7	FSM	ENSG00000095596.12	ENST00000371531.5	2245	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	7.11805216802087	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCAGAACTGTTCTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	93073474	93077884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93073835_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_18727.known	chr10	+	2117	7	FSM	ENSG00000095596.12	ENST00000224356.5	2117	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.98377435700541	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCAGAACTGTTCTCTGA	93073845	True	NA	NA	False	AATAAA	-17	NA	93073892	93077885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93074124_93074307_93074533_93074778_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_18730.known	chr10	+	1456	6	FSM	ENSG00000095596.12	ENST00000624589.3	1456	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.3072789813801	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAATTTGAAGGTACTT	93074264	False	NA	NA	False	ATTAAA	-29	NA	93074311	93077479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93074533_93074798_93075070_93075148_93075308_93075825_93075961_93076543_93076697_93076962
transcript_18731.known	chr10	-	555	1	FSM	ENSG00000213432.2	ENST00000394133.2	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTCAGCATTAAAGTAAATG	-93284545	False	NA	NA	False	AAGAAA	-34	NA	93284558	93284003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93284000_93284600
transcript_18733.known	chr10	+	2658	9	FSM	ENSG00000138180.16	ENST00000371485.8	2658	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	16.7252615824088	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTAGTGTATTCGTGT	93493813	True	NA	6	True	AATAAA	-18	NA	93496611	93529092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93496924_93500039_93500235_93503112_93503389_93506987_93507057_93515404_93515556_93516934_93517249_93518876_93518949_93519681_93519808_93527949
transcript_18734.known	chr10	-	1070	6	FSM	ENSG00000138207.15	ENST00000371464.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.72046505340853	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCCTGAAAAGGAAGTTTC	-93601213	True	NA	NA	False	ATTAAA	-17	NA	93601235	93591693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93592113_93593822_93594036_93600392_93600500_93600666_93600804_93600917_93601047_93601170
transcript_18735.known	chr10	-	1314	6	FSM	ENSG00000138207.15	ENST00000371467.5	1314	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1.72046505340853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGGAAGTTTCCTCTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	93601663	93591686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93592113_93593822_93594036_93600392_93600500_93600666_93600804_93600917_93601047_93601361
transcript_18760.nnic	chr10	-	1467	15	NNC	ENSG00000148690.12	novel	3109	14	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_14	129.615069828051	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGAGGCTTTGGAAGTT	-93698461	False	NA	-4	True	AATAAA	-20	NA	93702626	93669678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93701675_93701796_93702374
transcript_18772.known	chr10	-	3109	14	FSM	ENSG00000148690.12	ENST00000359204.5	3109	14	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_13	30.9083393890222	1131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTTGTAGTGTGTAAAAA	-93698427	True	NA	NA	False	AATAAA	-19	NA	93702592	93667882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_93669869_93670769_93670849_93676652_93676692_93681479_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_18799.nic	chr10	-	944	11	ISM	ENSG00000148690.12	ENST00000359204.5	3109	14	-27	13685	-27	2487	5prime_fragment	FALSE	canonical	3	330	junction_10	33.3760393096605	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GATAAAACCAAAAAAGACTG	-93698454	True	NA	NA	False	AAAAAG	-5	NA	93702619	93681567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_93681599_93684055_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_1880.known	chr1	+	3320	7	FSM	ENSG00000132879.14	ENST00000376770.5	3320	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	72.2905019118464	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11654806	False	NA	NA	False	ATTAAA	-22	NA	11654856	11663327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655327_11655700_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_18809.nic	chr10	-	914	10	ISM	ENSG00000148690.12	ENST00000359204.5	3109	14	-27	16172	-27	0	5prime_fragment	FALSE	canonical	3	330	junction_9	34.9362735545241	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGTCTTTTAAAATGCCA	-93698454	True	NA	NA	False	ATTAAA	-19	NA	93702619	93684054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_93684099_93685245_93685360_93687403_93687450_93692008_93692094_93692645_93692730_93694860_93694938_93698135_93698182_93698300_93698397_93700029_93700107_93702374
transcript_18828.known	chr10	+	600	2	FSM	ENSG00000108231.14	ENST00000478763.2	600	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTCAAATGTGATTCTA	NA	False	NA	NA	False	AGTAAA	-17	NA	93757912	93758912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93758360_93758759
transcript_18829.known	chr10	+	3488	3	FSM	ENSG00000176273.15	ENST00000427197.2	3488	3	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	12	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGGTTGTTATGATTA	93892853	True	NA	NA	False	AATAAA	-20	NA	93893977	93903824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_93894212_93898570_93898752_93900751
transcript_1883.known	chr1	+	959	6	FSM	ENSG00000132879.14	ENST00000376768.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	83.0002409635056	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCAGCCTCTTCTTTGTGG	11653191	True	NA	NA	False	NA	NA	NA	11654880	11661391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658532_11658629_11658735_11658872_11661129
transcript_18835.known	chr10	-	3455	21	FSM	ENSG00000173145.11	ENST00000371361.3	3455	21	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_14	21.817653402692	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTGATATGATAATTT	-94358081	True	NA	-2	True	AATAAA	-25	NA	94362939	94333225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_94334306_94334633_94334719_94337776_94337875_94338607_94338737_94339738_94339921_94340275_94340348_94340432_94340497_94341672_94341746_94344414_94344516_94344852_94344934_94346424_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_18837.nic	chr10	-	1488	11	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-49	13250	-29	0	5prime_fragment	FALSE	canonical	3	195	junction_4	18.2945347030199	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	-94358130	True	NA	47	True	AATAAA	-10	NA	94362988	94346475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_18840.nic	chr10	-	846	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-49	21737	-29	6361	5prime_fragment	FALSE	canonical	3	212	junction_3	8.58836422143355	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGTAGTATTAATTTCTT	-94358130	True	NA	NA	False	NA	NA	NA	94362988	94354962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_18841.nic	chr10	-	780	6	ISM	ENSG00000173145.11	ENST00000371361.3	3455	21	-49	21803	-29	6295	5prime_fragment	FALSE	canonical	3	212	junction_3	8.58836422143355	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACAGGAGAAGAAGATGCA	-94358130	True	NA	NA	False	AAGAAA	-1	NA	94362988	94355028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_94355094_94356534_94356592_94357173_94357332_94358082_94358216_94361664_94361873_94362829
transcript_18842.known	chr10	-	2190	10	FSM	ENSG00000173145.11	ENST00000463649.5	2190	10	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	18.9678089872757	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATGACTTTCAAAGAAAA	-94358081	True	NA	47	True	AATAAA	-10	NA	94362939	94346475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_94346557_94349249_94349379_94350112_94350289_94352309_94352404_94352895_94353058_94354962_94355094_94356534_94356592_94357173_94358216_94361664_94361873_94362829
transcript_18847.known	chr10	+	3131	23	FSM	ENSG00000119969.15	ENST00000394036.5	3131	23	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_12	160.102220704087	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	94501886	False	NA	19	True	AATAAA	-17	NA	94545921	94602098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94583987_94584126_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_18851.nic	chr10	+	3106	22	NIC	ENSG00000119969.15	novel	3128	22	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	190	junction_1	86.3166401007166	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	94501729	True	NA	20	True	AATAAA	-18	NA	94545764	94602099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_18858.known	chr10	+	3128	22	FSM	ENSG00000119969.15	ENST00000348459.10	3128	22	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_1	55.2419538882157	661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATTAAATTATTTCTTC	94501752	True	NA	20	True	AATAAA	-18	NA	94545787	94602099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94581325_94581523_94582962_94583060_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_1886.known	chr1	+	2928	6	FSM	ENSG00000132879.14	ENST00000251547.10	2928	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	65.6219475480574	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	11653187	True	NA	NA	False	ATTAAA	-22	NA	11654876	11663327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658394_11658532_11658629_11658735_11658872_11661129
transcript_18863.known	chr10	+	2699	20	FSM	ENSG00000119969.15	ENST00000394045.5	2699	20	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	130.020369169188	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCATTAAATTATTTCTT	94501886	False	NA	19	True	AATAAA	-17	NA	94545921	94602098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959_94574188_94574553_94574737_94576661_94576806_94588228_94588391_94590412_94590553_94590637_94590777_94592228_94592313_94592394_94592515_94593498_94593616_94594694_94594855_94596859_94596957_94597034_94597112_94601527
transcript_18877.known	chr10	+	711	8	FSM	ENSG00000119969.15	ENST00000419900.5	711	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	119.263043183493	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTACCTTTTCAACAACC	94501754	True	NA	NA	False	ACTAAA	-37	NA	94545789	94574106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690_94562728_94562811_94562877_94571387_94571430_94573959
transcript_1889.known	chr1	+	822	6	FSM	ENSG00000132879.14	ENST00000376760.5	822	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	83.2836118333013	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGGAGGCCAGGTGTCC	11653220	True	NA	NA	False	NA	NA	NA	11654909	11661349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655669_11655700_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_18896.nic	chr10	+	482	5	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-25	11379	-23	5531	5prime_fragment	FALSE	canonical	3	190	junction_1	152.427851785689	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	94501729	True	NA	18	True	NA	NA	NA	94545764	94562727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_94545908_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_18900.nic	chr10	+	527	5	ISM	ENSG00000119969.15	ENST00000348459.10	3128	22	-23	39372	-23	5531	5prime_fragment	FALSE	canonical	3	375	junction_1	73.9099959410092	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATATCCTTATTCTAGT	94501729	True	NA	18	True	NA	NA	NA	94545764	94562727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_94545953_94546376_94546499_94554125_94554249_94558138_94558196_94562690
transcript_18904.known	chr10	+	400	4	FSM	ENSG00000119969.15	ENST00000630929.2	400	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	234.762764414537	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTGTGCAAATTGAGAG	94501780	True	NA	NA	False	NA	NA	NA	94545815	94557196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_94545953_94546376_94546499_94554125_94554249_94557178
transcript_18906.nic	chr10	+	389	3	ISM	ENSG00000119969.15	ENST00000419900.5	711	8	-25	19857	-23	-2947	5prime_fragment	FALSE	canonical	3	190	junction_1	190	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	94501729	True	NA	41	True	NA	NA	NA	94545764	94554249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_94545908_94546376_94546499_94554125
transcript_18908.nic	chr10	+	434	3	ISM	ENSG00000119969.15	ENST00000630929.2	400	4	-51	2947	-23	-2947	5prime_fragment	FALSE	canonical	3	375	junction_1	97.5	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTATATGTAACTGACTA	94501729	True	NA	41	True	NA	NA	NA	94545764	94554249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_94545953_94546376_94546499_94554125
transcript_1891.known	chr1	+	1896	5	FSM	ENSG00000132879.14	ENST00000251546.8	1896	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	91.4668655853036	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACCTGTGCCCTGTGGTTTC	NA	False	NA	15	True	AATAAA	-16	NA	11654374	11662289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654582_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_18917.known	chr10	-	850	6	FSM	ENSG00000107438.9	ENST00000477757.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	486.408305850137	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCAAATCTACTGTGAGA	-95270667	True	NA	NA	False	NA	NA	NA	95291012	95238009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95290819
transcript_18921.known	chr10	-	1431	7	FSM	ENSG00000107438.9	ENST00000329399.7	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_2	105.588430553099	3531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTGGTGTCTGTTATC	-95270658	True	NA	-4	True	AATAAA	-16	NA	95291003	95237571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95238112_95238567_95238686_95247214_95247367_95263863_95264064_95268777_95268863_95271632_95271785_95290819
transcript_18922.known	chr10	-	5927	25	FSM	ENSG00000095637.23	ENST00000371249.6	5927	25	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_17	16.5125688660352	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTGTTCTGGTCATTC	-95557542	True	NA	-6	True	AATAAA	-23	NA	95561378	95311772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95315127_95318319_95318433_95321962_95322022_95339132_95339328_95341284_95341411_95341563_95341679_95346405_95346453_95354881_95354968_95357630_95357804_95367649_95367700_95381684_95381800_95383984_95384115_95384237_95384286_95397219_95397284_95399016_95399190_95406117_95406148_95410632_95410778_95414493_95414863_95421960_95422074_95422189_95422217_95432447_95432577_95437489_95437556_95441125_95441181_95491034_95491121_95561319
transcript_18923.known	chr10	-	3337	18	FSM	ENSG00000059573.9	ENST00000371221.3	3337	18	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_12	161.334165020209	213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCTGTGCGTGATTGA	-95648529	True	NA	-15	True	AATAAA	-11	NA	95656706	95605944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95606944_95610196_95610293_95611255_95611443_95613741_95613864_95613965_95614162_95616476_95616615_95621030_95621252_95625361_95625456_95626702_95626777_95627441_95627587_95628367_95628493_95632958_95633050_95633496_95633650_95637092_95637198_95637286_95637437_95642991_95643207_95653289_95653406_95656596
transcript_18926.known	chr10	-	2235	12	FSM	ENSG00000119977.22	ENST00000680709.1	2235	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	136.357454405327	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCATTGTGAGGAAAAATAAA	-95689674	True	NA	37	True	NA	NA	NA	95693942	95663446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95692919_95693039_95693352_95693477_95693643
transcript_18927.known	chr10	-	2414	13	FSM	ENSG00000119977.22	ENST00000680144.1	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	124.444850569774	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAGCAGCATGGTAGAAG	-95689651	True	NA	-22	True	AATAAA	-27	NA	95693919	95663400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_18928.known	chr10	-	2552	14	FSM	ENSG00000119977.22	ENST00000614499.5	2552	14	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	75.9139188615835	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGTACTAATTCCAGC	NA	False	NA	-35	True	AATAAA	-14	NA	95693989	95663413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_18929.known	chr10	-	1464	10	FSM	ENSG00000119977.22	ENST00000371209.5	1464	10	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_7	45.2084336063063	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCAATGCTGCCTCCTT	-95689631	True	NA	NA	False	AATAAA	-29	NA	95693899	95683260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687246_95687356_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_1893.known	chr1	+	1734	5	FSM	ENSG00000132879.14	ENST00000376762.8	1734	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	59.721750644133	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCCCTGTGGTTTCTG	11653220	True	NA	17	True	AATAAA	-18	NA	11654909	11662291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11654953_11655805_11656101_11658266_11658365_11658735_11658872_11661129
transcript_18930.known	chr10	-	2364	13	FSM	ENSG00000119977.22	ENST00000679984.1	2364	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	133.716324940359	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGTTCATTGTGAGGAAAAA	-95689679	True	NA	33	True	NA	NA	NA	95693947	95663450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95664301_95680471_95680610_95682650_95682805_95683100_95683181_95683521_95683630_95684498_95684625_95685555_95685637_95686494_95686531_95687043_95687160_95687591_95687720_95692919_95693039_95693352_95693477_95693643
transcript_18931.known	chr10	-	557	3	FSM	ENSG00000119977.22	ENST00000478245.1	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_1	6.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCCCTGGCCCACATTGG	-95689633	True	NA	NA	False	NA	NA	NA	95693901	95692863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95693039_95693352_95693477_95693643
transcript_18932.known	chr10	+	1903	10	FSM	ENSG00000138185.20	ENST00000371207.8	1903	10	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_9	1.87247772737252	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACACCTTTCATAATCTTT	NA	False	NA	-40	True	TTTAAA	-5	NA	95755651	95866654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_95755767_95823236_95823365_95839690_95839809_95842343_95842495_95844475_95844636_95845356_95845597_95847445_95847707_95860468_95860583_95864723_95864862_95866176
transcript_18939.known	chr10	-	2366	4	FSM	ENSG00000226688.8	ENST00000449419.6	2366	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	29.8477618740315	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAAGTCCAATTAAACCC	-95906860	True	NA	-38	True	NA	NA	NA	95907890	95873777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95875667_95876517_95876661_95904829_95904936_95907662
transcript_18942.known	chr10	-	3965	3	FSM	ENSG00000226688.8	ENST00000657446.1	3965	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACAAAATCCCTGGGTAA	-95907469	False	NA	-52	True	ATTAAA	-18	NA	95907903	95873045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95876661_95904829_95904939_95907662
transcript_18943.known	chr10	-	3878	3	FSM	ENSG00000226688.8	ENST00000669099.1	3878	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	16.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATTAAATTTTGAGATGC	-95907469	False	NA	-24	True	ATTAAA	-40	NA	95907903	95873017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95876661_95904829_95904939_95907777
transcript_18947.nic	chr10	-	502	2	ISM	ENSG00000226688.8	ENST00000661794.1	3966	4	33	31478	12	11	5prime_fragment	FALSE	canonical	3	44	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAGAAAAACCATCAAC	-95906840	True	NA	NA	False	AAAACA	-5	NA	95907870	95904644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_95904939_95907662
transcript_18948.known	chr10	-	389	2	FSM	ENSG00000226688.8	ENST00000427300.1	389	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CAAAACAAAAACAAAAAGAA	-95906853	True	NA	NA	False	NA	NA	NA	95907883	95904655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_95904939_95907777
transcript_18950.known	chr10	+	1241	8	FSM	ENSG00000188649.15	ENST00000423344.6	1241	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.9059520091609	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTTAAAACACTGGCTACT	95907903	True	NA	NA	False	NA	NA	NA	95907964	95938723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_95908058_95911300_95911360_95913381_95913438_95922015_95922077_95924313_95924391_95924778_95924845_95927236_95927333_95937990
transcript_18951.nic	chr10	+	750	7	ISM	ENSG00000188649.15	ENST00000423344.6	1241	8	-61	11210	-61	2701	5prime_fragment	FALSE	canonical	1	2	junction_1	1.91485421551268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGTGATTACTAAGTT	95907842	True	NA	NA	False	AATAAA	-29	NA	95907903	95927513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_95908058_95911300_95911360_95913381_95913438_95922015_95922077_95924313_95924391_95924778_95924845_95927236
transcript_18966.known	chr10	+	7994	6	FSM	ENSG00000177853.15	ENST00000624776.4	8001	6	0	7	0	-7	multi-exon	FALSE	canonical	3	9	junction_2	27.8826110685495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAAACAGGAAGTGGGCT	96129681	True	NA	NA	False	AATAAA	-8	NA	96130055	96163752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96130119_96132585_96132671_96133555_96133649_96155325_96155399_96155923_96156048_96156196
transcript_18982.nic	chr10	+	628	2	ISM	ENSG00000177853.15	ENST00000488700.5	729	6	-25	23089	-5	21	5prime_fragment	FALSE	canonical	3	10	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAAACCCTTCTGTTCCC	96128988	True	NA	NA	False	AAAAAG	-15	NA	96129709	96132930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_96129993_96132585
transcript_18983.nic	chr10	+	456	2	ISM	ENSG00000177853.15	ENST00000539666.5	485	5	-57	18645	-57	12	5prime_fragment	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGAATGAAACCCT	96129985	False	NA	NA	False	AAAAAG	-6	NA	96129998	96132921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_96130119_96132585
transcript_18984.nnic	chr10	+	767	2	ISM	ENSG00000177853.15	ENST00000316045.10	8345	6	25	30838	25	12	5prime_fragment	FALSE	canonical	3	34	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGAATGAAACCCT	96129987	False	NA	NA	False	AAAAAG	-6	NA	96130321	96132921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_96130753_96132585
transcript_18985.known	chr10	-	1474	1	FSM	ENSG00000287009.1	ENST00000669444.1	1474	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTCTTTAGGAAGCCTT	-96130510	False	NA	NA	False	AATAAA	-22	NA	96130528	96129054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_96129100_96130500
transcript_18986.known	chr10	-	6769	21	FSM	ENSG00000095587.9	ENST00000357947.4	6769	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	19.4424792657727	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTCTTGGGTTTGT	-96513296	True	NA	NA	False	ATTAAA	-14	NA	96513926	96364607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_96368223_96370064_96370316_96373595_96373810_96376691_96376820_96378966_96379093_96384586_96384768_96386054_96386216_96386952_96387079_96395186_96395383_96395874_96396021_96397185_96397303_96405231_96405335_96410358_96410475_96413191_96413317_96420955_96421062_96422548_96422728_96428630_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
transcript_18988.nic	chr10	-	1382	5	ISM	ENSG00000095587.9	ENST00000357947.4	6769	21	2	63518	2	-32933	5prime_fragment	FALSE	canonical	3	45	junction_2	4.76313972081441	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTCATGTTGGATCAAA	-96513294	True	NA	2	True	AATAAA	-29	NA	96513924	96428125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_96428749_96432806_96432963_96446090_96446169_96480348_96480460_96513510
transcript_18990.known	chr10	-	6250	15	FSM	ENSG00000077147.16	ENST00000649367.1	6250	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_14	505.370226988621	817	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAATGTACTTCCTTTG	-96586541	False	NA	-21	True	AATAAA	-2	NA	96586594	96518120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_96522331_96527212_96527290_96527412_96527497_96528030_96528178_96530539_96530609_96533050_96533191_96544075_96544207_96547894_96547990_96551244_96551412_96552927_96553060_96559658_96559737_96561977_96562139_96565303_96565427_96576633_96576830_96586154
transcript_18993.nnic	chr10	+	619	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-12794	39	multi-exon	FALSE	canonical	2	4	junction_1	0	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAGAAAAAGGA	96737367	True	NA	NA	False	AATAAA	-30	NA	96737493	96750938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96737608_96750433
transcript_18994.nnic	chr10	+	608	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-23	41	multi-exon	FALSE	canonical	0	0	junction_1	0	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAGAAAAAGGAAA	NA	False	NA	NA	False	AATAAA	-32	NA	96750264	96750940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96750366_96750433
transcript_18996.nnic	chr10	+	554	2	Genic_Genomic	ENSG00000236552.2	novel	612	1	NA	NA	-23	38	multi-exon	FALSE	canonical	2	160	junction_1	0	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAAAAAGG	NA	False	NA	NA	False	AATAAA	-29	NA	96750264	96750937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_+_96750544_96750662
transcript_18997.known	chr10	+	612	1	FSM	ENSG00000236552.2	ENST00000439189.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49608	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	96749995	True	NA	NA	False	AATACA	-36	NA	96750287	96750899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_96750300_96750900
transcript_19.known	ERCC-00043	+	1007	1	FSM	ERCC-00043A	DQ516787	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	421	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-12	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00043_+_0_1000
transcript_19002.nic	chr10	+	1386	8	NIC	ENSG00000196233.14	novel	2213	9	NA	NA	-2	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	14.3014199380655	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAAAAGCTGCTG	96828952	True	NA	NA	False	AAAAAG	-23	NA	96832257	96958920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96832400_96833405_96833480_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96958411
transcript_19003.nic	chr10	+	1320	7	NIC	ENSG00000196233.14	novel	2213	9	NA	NA	-4	-6	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	16.9648329067974	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAACAAAAAGCTGCTG	96828944	True	NA	NA	False	AAAAAG	-23	NA	96832249	96958920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_96832400_96907264_96907331_96907667_96907748_96944112_96944246_96949007_96949296_96952102_96952197_96958411
transcript_1901.known	chr1	+	1444	6	FSM	ENSG00000116663.11	ENST00000376753.9	1444	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	2.48193472919817	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGGGTTGGTTTTA	11664104	True	NA	NA	False	AATAAA	-30	NA	11664199	11674354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11664256_11668655_11668945_11671265_11671393_11671927_11672024_11673276_11673413_11673614
transcript_19010.known	chr10	-	1876	15	FSM	ENSG00000269891.2	ENST00000479633.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.983200483898	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTTCGTTGCTGTATT	-97287818	True	NA	NA	False	AATAAA	-12	NA	97292637	97153045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97153222_97157817_97157890_97163379_97163452_97164818_97164891_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_19011.known	chr10	-	5438	12	FSM	ENSG00000213390.11	ENST00000358531.9	5438	12	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_7	26.4990253991998	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAGGATTTGACTGGTC	-97287818	True	NA	-8	True	ATTAAA	-17	NA	97292637	97222178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97256317_97256405_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_19013.known	chr10	-	5390	11	FSM	ENSG00000213390.11	ENST00000358308.7	5390	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	97.4774332858637	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGATTTGACTGGTCTAT	-97287854	True	NA	-5	True	ATTAAA	-20	NA	97292673	97222175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97226133_97229146_97229226_97229763_97229875_97235216_97235316_97243967_97244160_97246271_97246338_97259401_97259629_97263419_97263630_97264825_97264907_97265859_97266126_97292571
transcript_19014.known	chr10	+	633	2	FSM	ENSG00000165879.9	ENST00000490980.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGGTTTTATTTTATAC	97320694	False	NA	22	True	AATAAA	-15	NA	97320740	97321823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97321235_97321684
transcript_19017.nnic	chr10	+	774	2	NNC	ENSG00000225850.4	novel	806	2	NA	NA	230	-3886	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	97334781	False	NA	12	True	AATAAA	-22	NA	97334793	97339318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_97334972_97338722
transcript_19018.known	chr10	+	805	2	FSM	ENSG00000225850.4	ENST00000445808.4	806	2	0	1	0	-1	multi-exon	FALSE	canonical	3	30	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACCCAGTAATTCC	97334551	False	NA	NA	False	ATTAAA	-23	NA	97334563	97343203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97334972_97342806
transcript_19019.known	chr10	-	4396	34	FSM	ENSG00000052749.14	ENST00000370992.9	4396	34	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_27	36.1813867290655	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTCTAGAAACTGTT	-97397701	True	NA	-12	True	AATAAA	-17	NA	97401340	97356700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97357197_97358536_97358620_97358942_97359011_97360545_97360619_97363853_97363904_97366107_97366234_97366445_97366622_97366741_97366910_97367040_97367133_97369424_97369583_97370166_97370275_97370454_97370561_97370715_97370797_97370922_97371082_97372072_97372167_97372735_97372804_97373045_97373201_97373574_97373738_97373829_97373895_97379292_97379415_97379627_97379771_97380798_97380914_97381385_97381484_97381714_97381827_97385165_97385258_97385894_97385994_97388251_97388380_97388488_97388625_97390422_97390540_97390738_97390845_97393683_97393761_97396217_97396302_97400304_97400535_97401092
transcript_19046.known	chr10	+	1187	4	FSM	ENSG00000171314.9	ENST00000467867.1	1187	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	4365.83404275619	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACCCACTCCCTTCATAC	97368819	False	NA	NA	False	NA	NA	NA	97427533	97432690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97427929_97430378_97430654_97430954_97431136_97432354
transcript_19049.known	chr10	+	1802	4	FSM	ENSG00000171314.9	ENST00000334828.6	1802	4	0	0	0	0	multi-exon	FALSE	canonical	3	9259	junction_3	341.060112003735	21240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGTGATGTGGAAGAC	97367476	True	NA	1	True	AATAAA	-20	NA	97426190	97433444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97426447_97430378_97430654_97430954_97431136_97432354
transcript_19050.known	chr10	+	497	2	FSM	ENSG00000171314.9	ENST00000473929.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTCATCTTTCCAAGG	97367578	False	NA	NA	False	AATAAA	-16	NA	97426292	97427443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97426447_97427100
transcript_19052.known	chr10	-	642	9	FSM	ENSG00000171311.13	ENST00000471049.5	642	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	341.854661186593	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCATCAGCTGGTGTGAG	-97434911	True	NA	NA	False	NA	NA	NA	97445973	97436539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438662_97438704_97441170_97441260_97443236_97443312_97445452_97445607_97445731_97445848_97445954
transcript_19056.known	chr10	-	1145	8	FSM	ENSG00000171311.13	ENST00000370902.8	1145	8	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_7	67.5610079551687	3091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGAGTTGGGTTGAAGTC	-97434944	True	NA	NA	False	NA	NA	NA	97446006	97435908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_19066.known	chr10	-	718	7	FSM	ENSG00000171311.13	ENST00000370885.8	718	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	246.428319530582	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGGCACCAACAAACAAAA	-97434931	True	NA	33	True	AATAAA	-12	NA	97445993	97436247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97438669_97438704_97441170_97441260_97445731_97445848_97445954
transcript_19073.known	chr10	-	741	7	FSM	ENSG00000171311.13	ENST00000370886.9	741	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	268.134760894592	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACCAACAAACAAAACTGT	-97434926	True	NA	-32	True	AATAAA	-16	NA	97445988	97436243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_19080.known	chr10	-	564	6	FSM	ENSG00000171311.13	ENST00000485122.6	564	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	264.675348304295	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCAGTTTACGCTGTAG	-97434923	True	NA	-52	True	NA	NA	NA	97445985	97436332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97438669_97438704_97441170_97441260_97443236_97443312_97445731_97445848_97445954
transcript_19081.known	chr10	-	536	6	FSM	ENSG00000171311.13	ENST00000370884.5	536	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	284.545251234316	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAACACCAAGATG	-97434955	True	NA	NA	False	NA	NA	NA	97446017	97436405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97436552_97437190_97437276_97437699_97437751_97443236_97443312_97445731_97445848_97445954
transcript_19094.known	chr10	-	739	4	FSM	ENSG00000171311.13	ENST00000476234.5	739	4	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	76.4736701239206	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTGGATCACAAAGTCAGG	-97434944	True	NA	NA	False	NA	NA	NA	97446006	97440763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97441260_97443236_97443312_97445731_97445848_97445954
transcript_19095.known	chr10	+	1798	11	FSM	ENSG00000171307.19	ENST00000370854.7	1798	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	135.091265446734	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441102	True	NA	5	True	AATAAA	-18	NA	97446169	97457366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_19097.known	chr10	+	1718	10	FSM	ENSG00000171307.19	ENST00000352634.8	1718	10	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_6	106.321315935339	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441134	True	NA	5	True	AATAAA	-18	NA	97446201	97457366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_19099.known	chr10	+	1647	10	FSM	ENSG00000171307.19	ENST00000353979.7	1647	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	189.873317091185	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGTAGCTTCTCACTCT	97441136	True	NA	5	True	AATAAA	-18	NA	97446203	97457366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97453617_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_191.known	SIRV2	-	686	5	FSM	SIRV2A	SIRV203	686	5	0	0	0	0	multi-exon	FALSE	canonical	3	2395	junction_4	277.837519964457	13708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTGACGTGGACGTTTC	NA	False	NA	NA	False	NA	NA	NA	5895	3665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_3826_3966_4095_4338_4480_4687_4801_5751
transcript_19104.known	chr10	+	1280	8	FSM	ENSG00000171307.19	ENST00000370846.8	1280	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	161.450314591309	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGACATCCCTTTACTCA	97441129	True	NA	NA	False	AAGAAA	-24	NA	97446196	97457085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97455601_97455784_97455973_97456045_97456776
transcript_19109.known	chr10	+	1977	12	FSM	ENSG00000171307.19	ENST00000393760.6	1977	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	197.708609359522	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGCTTCTCACTCTCTGC	97441107	True	NA	9	True	AATAAA	-22	NA	97446174	97457370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97446354_97450356_97450537_97451670_97451919_97452089_97452285_97452414_97452504_97452894_97452924_97453529_97453664_97453798_97453847_97454713_97454800_97455659_97455784_97455973_97456045_97456776
transcript_19111.known	chr10	-	3499	31	FSM	ENSG00000155229.21	ENST00000438925.7	3499	31	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_24	50.5380934433511	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489772	True	NA	-4	True	AATAAA	-16	NA	97498422	97458323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_19112.known	chr10	-	3401	30	FSM	ENSG00000155229.21	ENST00000415383.5	3401	30	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_26	121.153394774552	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97489738	True	NA	-4	True	AATAAA	-16	NA	97498388	97458323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466157_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477405_97477854_97477930_97478303_97478390_97480941_97481043_97498272
transcript_19114.known	chr10	-	3165	29	FSM	ENSG00000155229.21	ENST00000327238.14	3165	29	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_18	91.5575262457702	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGGGCTGTCAGATATTT	-97489734	True	NA	-6	True	AATAAA	-14	NA	97498384	97458325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_19121.nic	chr10	-	893	8	ISM	ENSG00000155229.21	ENST00000437002.5	933	12	-33	7438	4	150	5prime_fragment	FALSE	canonical	3	324	junction_1	44.1555691358891	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGACATATGAGGAATGAT	-97489793	True	NA	NA	False	AATAAA	-19	NA	97498443	97476532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272
transcript_19123.known	chr10	-	3532	32	FSM	ENSG00000155229.21	ENST00000370782.6	3532	32	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_31	86.7899014443266	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGCTGTCAGATATTTCC	-97498734	False	NA	-4	True	AATAAA	-16	NA	97498758	97458323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97458720_97458799_97458901_97459222_97459283_97459361_97459527_97459658_97459742_97460045_97460233_97460694_97460752_97460906_97461008_97461495_97461623_97461827_97461897_97462016_97462120_97462582_97462683_97463857_97464014_97465804_97465955_97466058_97466160_97466503_97466586_97466775_97466902_97467504_97467584_97468251_97468407_97468965_97469105_97469645_97469724_97470128_97470204_97470774_97470862_97476682_97476745_97476834_97476964_97477346_97477417_97477854_97477930_97478303_97478390_97480941_97481043_97484102_97484152_97498272_97498393_97498695
transcript_19124.nnic	chr10	+	1506	3	NNC	ENSG00000165886.5	novel	1647	3	NA	NA	-1093	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.5	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTGGCATTTGACTG	97497799	True	NA	13	True	AATAAA	-18	NA	97497830	97571206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_97498040_97567913_97568142_97570137
transcript_19125.known	chr10	+	1647	3	FSM	ENSG00000165886.5	ENST00000370664.4	1647	3	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	12.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCCTGGCATTTGACTG	97496205	True	NA	13	True	AATAAA	-18	NA	97498923	97571206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97499274_97567913_97568142_97570137
transcript_19127.known	chr10	-	2333	5	FSM	ENSG00000171160.18	ENST00000307450.11	2333	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	142.594486218788	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTAGTTTTCCTGACT	-97631117	True	NA	-7	True	AATAAA	-19	NA	97633500	97614554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97616412_97616677_97616788_97617207_97617323_97619586_97619684_97633346
transcript_19129.known	chr10	+	4189	9	FSM	ENSG00000155252.13	ENST00000370631.3	4189	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_6	21.1999410376539	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTAGTGCCAAGGGCTT	97638181	True	NA	NA	False	AATAAA	-18	NA	97640685	97676434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97641178_97650940_97651142_97656284_97656417_97656820_97656975_97662906_97662969_97664884_97664985_97666437_97666572_97667060_97667121_97673580
transcript_19131.known	chr10	-	419	2	FSM	ENSG00000171160.18	ENST00000370635.3	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	0	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTAATTCAACCTCCA	-97631108	True	NA	-22	True	AATAAA	-16	NA	97633491	97619409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97619684_97633346
transcript_19132.known	chr10	-	1375	3	FSM	ENSG00000119986.7	ENST00000370626.4	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	4.5	265	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGTGTGAGTCTGTCAC	-97686167	True	NA	-1	True	AATAAA	-15	NA	97687241	97677423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_97678026_97679618_97679916_97686765
transcript_19134.known	chr10	+	3213	2	FSM	ENSG00000155254.13	ENST00000285605.8	3213	2	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTCTTCTGTCCTG	97710038	True	NA	26	True	GATAAA	-21	NA	97713729	97718150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97715986_97717193
transcript_19135.known	chr10	+	2997	12	FSM	ENSG00000155256.18	ENST00000359980.5	2997	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	24.1370056411791	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTTGTCATGTCTTTG	97734216	True	NA	14	True	AATAAA	-16	NA	97737139	97760895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737326_97738476_97738675_97743093_97743165_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_19136.known	chr10	+	2927	11	FSM	ENSG00000155256.18	ENST00000337540.11	2927	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	32.5159960634762	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737322_97738476_97738650_97744728_97744916_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_19139.known	chr10	+	2765	10	FSM	ENSG00000155256.18	ENST00000357540.8	2765	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	34.4462365125211	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTCTTTGTGTTGGCATTT	97734197	True	NA	25	True	AATAAA	-27	NA	97737120	97760906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737322_97738476_97738675_97748268_97748365_97749473_97749587_97750330_97750471_97751390_97751463_97753037_97753183_97757264_97757312_97757641_97757724_97759235
transcript_19142.known	chr10	+	512	2	FSM	ENSG00000155256.18	ENST00000462887.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCCAGCCCAGGAGAGGC	97734259	True	NA	NA	False	NA	NA	NA	97737182	97738845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_97737326_97738476
transcript_19144.known	chr10	+	3393	10	FSM	ENSG00000166024.14	ENST00000298999.8	3393	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	41.2268640692893	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTGTGGTGTTTGTTGGT	98133082	True	NA	15	True	ATTAAA	-20	NA	98134656	98244897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_98134707_98156092_98156148_98162882_98162976_98163292_98163398_98208100_98209900_98231511_98231688_98234445_98234517_98235424_98235521_98236023_98236165_98244090
transcript_19154.known	chr10	-	2023	16	FSM	ENSG00000119943.13	ENST00000370575.5	2023	16	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_3	4.59661711358352	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGCTTGTATTTTTT	-98414678	True	NA	-3	True	ATTAAA	-19	NA	98415182	98383567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98383869_98384946_98385068_98387200_98387308_98388353_98388509_98390597_98390755_98391009_98391083_98392431_98392567_98392941_98393084_98395195_98395294_98395390_98395453_98397344_98397499_98400101_98400258_98407581_98407656_98407903_98407998_98410938_98410959_98415008
transcript_19159.known	chr10	-	279	2	FSM	ENSG00000119943.13	ENST00000462874.1	279	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAGATACTCAACACTCA	-98414654	True	NA	NA	False	NA	NA	NA	98415158	98414166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98414296_98415008
transcript_19162.known	chr10	-	1580	10	FSM	ENSG00000107521.20	ENST00000338546.9	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	90.5989670995546	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAATGGTTGAGGTGTG	-98443002	True	NA	97	True	AATAAA	-16	NA	98446913	98429150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98429643_98429790_98429890_98430570_98430671_98431130_98431292_98433982_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_1919.nnic	chr1	-	1050	9	NNC	ENSG00000116670.15	novel	1053	9	NA	NA	-208	0	at_least_one_novel_splicesite	FALSE	canonical	3	862	junction_8	824.264672298892	4259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-11691846	False	NA	-20	True	AATAAA	-23	NA	11691858	11674479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691751
transcript_19194.known	chr10	-	922	4	FSM	ENSG00000107521.20	ENST00000465957.1	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	96.8067949864861	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAAGGAATATATC	-98443016	True	NA	-29	True	NA	NA	NA	98446927	98442387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98442958_98443123_98443241_98445299_98445414_98446806
transcript_19203.known	chr10	+	1058	3	FSM	ENSG00000287261.2	ENST00000660697.2	1122	3	59	5	30	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGAGTTATGAAATTCAAT	98446302	True	NA	NA	False	AATATA	-16	NA	98446345	98453805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_98446762_98449346_98449382_98453198
transcript_19212.known	chr10	-	2791	19	FSM	ENSG00000107521.20	ENST00000467246.5	2791	19	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_13	84.5201415106935	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTAGTGCTTCTAGACC	-98442976	True	NA	-1	True	AATAAA	-30	NA	98446887	98417014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_98417727_98418174_98418258_98420044_98420159_98422368_98422514_98423602_98423669_98423752_98423888_98424312_98424375_98425540_98425721_98425817_98425986_98427214_98427265_98429572_98429643_98430570_98430671_98431130_98431292_98433939_98434092_98435271_98435415_98435634_98435773_98443123_98443241_98445299_98445414_98446806
transcript_19213.known	chr10	-	1978	9	FSM	ENSG00000120053.12	ENST00000370508.7	1978	9	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_4	39.5719281814773	1589	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAGTTGATTTTATGAC	-99424683	True	NA	-10	True	AATAAA	-20	NA	99430624	99396869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99397687_99402579_99402723_99403468_99403635_99403723_99403875_99405755_99405861_99406136_99406250_99406725_99406850_99420623_99420806_99430447
transcript_19234.nic	chr10	+	1121	4	FSM	ENSG00000224934.6	ENST00000692010.1	1123	4	-23	25	-15	0	multi-exon	FALSE	canonical	1	4	junction_2	3.55902608401044	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	99430385	True	NA	-8	True	AATAAA	-1	NA	99430899	99438098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99431266_99433545_99433632_99433739_99433941_99437630
transcript_19237.nnic	chr10	+	1056	4	NNC	ENSG00000224934.6	novel	1123	4	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	4.02768199119819	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	99430385	True	NA	-8	True	AATAAA	-1	NA	99430899	99438098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_99431266_99433545_99433632_99433804_99433941_99437630
transcript_19246.nnic	chr10	+	936	3	NIC	ENSG00000224934.6	novel	1123	4	NA	NA	-15	-1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGGTATCACAATAGCA	99430385	True	NA	8	True	AATAAA	-17	NA	99430899	99438114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_99431266_99433545_99433632_99437630
transcript_19249.nic	chr10	+	1229	3	FSM	ENSG00000224934.6	ENST00000689675.1	1221	3	-25	17	-15	0	multi-exon	FALSE	canonical	3	11	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTATTTCTAATCACTAT	99430385	True	NA	-8	True	AATAAA	-1	NA	99430899	99438098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99431266_99433545_99433941_99437630
transcript_19252.known	chr10	+	864	1	FSM	ENSG00000260475.1	ENST00000566847.1	864	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCACCTCCCATCCCCTG	99621042	False	NA	NA	False	AATAAA	-22	NA	99621054	99621918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99621100_99621900
transcript_19254.known	chr10	+	8548	13	FSM	ENSG00000198018.7	ENST00000370489.5	8548	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	9.98436277385793	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCATGAGTTGCTACT	99658361	True	NA	21	True	AATAAA	-33	NA	99659508	99711241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99659589_99659861_99659965_99661445_99661629_99679260_99679467_99679724_99679876_99685791_99685896_99688693_99688751_99691384_99691519_99695955_99696123_99698533_99698859_99700972_99701059_99702511_99702674_99704451
transcript_19259.known	chr10	+	1332	9	FSM	ENSG00000119929.13	ENST00000370476.10	1332	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_6	39.4746754261514	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727690	True	NA	NA	False	AATAAA	-17	NA	99732233	99756134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_99732410_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_19264.nnic	chr10	+	1298	9	NNC	ENSG00000119929.13	novel	1332	9	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	99.3513336598961	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATAGTCTCTTATTCTTGC	99727671	True	NA	NA	False	AATAAA	-17	NA	99732214	99756134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_99732357_99736245_99736318_99739709_99739770_99743152_99743363_99744036_99744073_99747256_99747391_99750368_99750397_99754528_99754635_99755624
transcript_19268.known	chr10	-	2788	9	FSM	ENSG00000014919.13	ENST00000370483.9	2788	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	68.1431168570972	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAGTATTTCCTTATAG	-99729142	True	NA	0	True	AATAAA	-20	NA	99732100	99711843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99713480_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_19270.known	chr10	-	5030	9	FSM	ENSG00000014919.13	ENST00000016171.6	5030	9	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	22.1697992773954	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTCAACCTAGAATTTTT	-99729169	True	NA	NA	False	ATTAAA	-18	NA	99732127	99710867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99714719_99716347_99716462_99718345_99718501_99720986_99721069_99723955_99724124_99726967_99727155_99727440_99727564_99729552_99729735_99731959
transcript_19297.known	chr10	-	837	3	FSM	ENSG00000229278.3	ENST00000452391.2	837	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAGAAAAAGGCAACTAA	-99659251	True	NA	NA	False	NA	NA	NA	99659284	99651594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99652211_99653824_99653906_99659144
transcript_19302.known	chr10	-	4178	14	FSM	ENSG00000107554.17	ENST00000543621.6	4178	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	19.0942849035079	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTTTCTTGATTT	NA	False	NA	-5	True	AATAAA	-16	NA	99914082	99875576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_99877337_99879810_99880362_99884010_99884210_99885686_99885867_99886299_99886633_99888824_99888954_99894945_99895051_99896266_99896398_99898085_99898286_99898742_99898761_99899918_99900067_99907994_99908095_99908952_99909147_99913952
transcript_19307.nnic	chr10	-	781	4	NNC	ENSG00000107554.17	novel	4178	14	NA	NA	13	-20548	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	46.5999523128035	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTTTAAAACATTCATCT	-99911899	True	NA	NA	False	AATACA	-23	NA	99914069	99906951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_99907322_99907994_99908095_99908952_99909147_99913952
transcript_19309.nnic	chr10	-	903	6	NNC	ENSG00000120054.12	novel	1855	9	NA	NA	99	-117	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	1.62480768092719	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAATGGTCTCCATCTG	-100065207	False	NA	NA	False	AATACA	-17	NA	100065295	100042309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065127
transcript_1931.known	chr1	-	872	9	FSM	ENSG00000116670.15	ENST00000376667.7	872	9	0	0	0	0	multi-exon	FALSE	canonical	3	1064	junction_8	758.718450744411	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACTGTCAGACTTTGGGG	-11691597	False	NA	NA	False	CATAAA	-37	NA	11691609	11674747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_19310.nic	chr10	-	938	6	ISM	ENSG00000120054.12	ENST00000370418.8	1855	9	16479	117	4	-117	3prime_fragment	FALSE	canonical	1	1	junction_5	1.62480768092719	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAATGGTCTCCATCTG	NA	False	NA	NA	False	AATACA	-17	NA	100065390	100042309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_100042574_100048757_100048877_100054346_100054447_100057012_100057153_100063613_100063726_100065187
transcript_19313.nic	chr10	-	3221	12	NIC	ENSG00000107566.14	novel	3487	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	86	junction_11	86.1240696431655	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTTGTGTTTTTTTTTC	-100181347	True	NA	-3	True	AATAAA	-16	NA	100186029	100150093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_19314.known	chr10	-	1453	12	FSM	ENSG00000107566.14	ENST00000407654.7	1453	12	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_11	61.9330483614269	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGAGATCTGTTGAATAAT	-100181351	True	NA	-5	True	AATATA	-22	NA	100186033	100151807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100152353_100154859_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185961
transcript_1932.known	chr1	-	1053	9	FSM	ENSG00000116670.15	ENST00000376692.9	1053	9	0	0	0	0	multi-exon	FALSE	canonical	3	1115	junction_8	742.205149790137	5718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGCCATCATTAACTGG	-11669716	True	NA	-20	True	AATAAA	-23	NA	11681148	11674479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676847_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11681038
transcript_19322.known	chr10	-	962	11	FSM	ENSG00000107566.14	ENST00000370408.2	962	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	90.3250242180981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGCTCCCTGGCCAC	-100181347	True	NA	NA	False	NA	NA	NA	100186029	100154859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100154940_100156144_100156235_100164003_100164096_100167347_100167407_100174207_100174282_100175944_100176071_100178132_100178195_100179200_100179248_100183755_100183838_100185513_100185638_100185903
transcript_19327.nic	chr10	-	2010	15	NIC	ENSG00000095485.18	novel	2591	14	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_1	41.3639890706486	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAAGTGTCTTGTGTTCA	-100265508	True	NA	-4	True	AATGAA	-22	NA	100267680	100232298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_100232488_100233109_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_1933.known	chr1	-	1002	9	FSM	ENSG00000116670.15	ENST00000376672.5	1002	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_4	1140.69657994578	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGAGTTGTTTCAAT	-11691465	False	NA	-1	True	NA	NA	NA	11691477	11674524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11674817_11675081_11675175_11675657_11675732_11676045_11676141_11676808_11676949_11677542_11677615_11680352_11680472_11680561_11680614_11691412
transcript_19331.known	chr10	-	2591	14	FSM	ENSG00000095485.18	ENST00000354105.10	2591	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_8	21.6125100743985	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGTGTCTTGTGTTCAT	-100265466	True	NA	-3	True	AATGAA	-23	NA	100267638	100232297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100233372_100235666_100235765_100236849_100236970_100238021_100238232_100243697_100243778_100245798_100245914_100246794_100246936_100250247_100250333_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_19349.nnic	chr10	-	908	7	NNC	ENSG00000095485.18	novel	2591	14	NA	NA	0	-2713	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	46.4952207818777	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTAATTAGCTTGATTT	-100265508	True	NA	NA	False	AATAAA	-15	NA	100267680	100252986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_100253185_100253420_100253540_100256261_100256477_100260217_100260320_100260965_100261045_100261978_100262064_100267570
transcript_1935.known	chr1	+	1067	4	FSM	ENSG00000177674.16	ENST00000376637.7	1067	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	454.489457156782	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCACAACCTCCAGCCTCC	11726679	True	NA	-42	True	NA	NA	NA	11736083	11750710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11747439_11747546_11748414_11748590_11750076
transcript_19355.known	chr10	-	654	6	FSM	ENSG00000095485.18	ENST00000473842.1	654	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	47.3091957234532	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTTGGAAATCCAGAAAAG	-100265495	True	NA	NA	False	NA	NA	NA	100267667	100250273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100250333_100253420_100253540_100256261_100256477_100260965_100261045_100261978_100262064_100267570
transcript_19359.known	chr10	-	2634	5	FSM	ENSG00000196072.12	ENST00000614731.4	2634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	278.457694273295	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATCTTGTCTTTAT	-100277279	False	NA	NA	False	ATTAAA	-30	NA	100286378	100273279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100275494_100280123_100280229_100280933_100281054_100286096_100286214_100286300
transcript_19367.known	chr10	-	425	3	FSM	ENSG00000196072.12	ENST00000361832.2	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	305	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAATAATATTTGTAA	-100277574	True	NA	NA	False	TATAAA	-36	NA	100286673	100280933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100281054_100286096_100286333_100286604
transcript_1937.known	chr1	+	1130	5	FSM	ENSG00000177674.16	ENST00000314340.10	1130	5	0	0	0	0	multi-exon	FALSE	canonical	3	789	junction_2	125.736579800788	2368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGCTGTGTTTTGAACC	11726731	True	NA	17	True	ATTAAA	-18	NA	11736135	11750769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748611_11750076
transcript_19370.known	chr10	+	5245	6	FSM	ENSG00000099194.6	ENST00000370355.3	5245	6	0	0	0	0	multi-exon	FALSE	canonical	3	3457	junction_3	221.495282116798	799	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCACTGGGTCTGGGAGTT	100288588	True	NA	27	True	AATAAA	-17	NA	100347232	100364826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100347532_100348063_100348347_100352365_100352497_100354426_100354633_100356531_100356765_100360733
transcript_19376.known	chr10	+	1752	4	FSM	ENSG00000235823.4	ENST00000666713.1	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	27.0102861065105	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTATGTTAATTTTGCA	100373523	False	NA	13	True	TTTAAA	-14	NA	100373565	100383372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100382427
transcript_19378.known	chr10	+	1125	4	FSM	ENSG00000235823.4	ENST00000666045.1	1125	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	27.9404127862612	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373456	True	NA	19	True	AATAAA	-22	NA	100373567	100388360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380982_100381110_100381215_100381449_100388040
transcript_19379.known	chr10	+	1173	4	FSM	ENSG00000235823.4	ENST00000665755.1	1173	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.6542785015767	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373480	False	NA	19	True	AATAAA	-22	NA	100373591	100388360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374081_100380982_100381110_100381215_100381449_100388036
transcript_1938.known	chr1	+	1100	5	FSM	ENSG00000177674.16	ENST00000376629.8	1100	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_4	326.56727867317	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCTGTGTTTTGAACCAC	11726742	True	NA	19	True	ATTAAA	-20	NA	11736146	11750771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11745802_11745838_11747439_11747546_11748414_11748590_11750076
transcript_19381.known	chr10	+	1209	4	FSM	ENSG00000235823.4	ENST00000665022.1	1209	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.4995726467629	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373460	True	NA	19	True	AATAAA	-22	NA	100373571	100388360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374013_100380894_100381110_100381215_100381449_100388040
transcript_19384.known	chr10	+	992	3	FSM	ENSG00000235823.4	ENST00000661096.1	992	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373464	True	NA	19	True	AATAAA	-22	NA	100373575	100388360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374017_100381221_100381449_100388036
transcript_19385.known	chr10	+	1070	3	FSM	ENSG00000235823.4	ENST00000666154.1	1070	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	118	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	100373456	True	NA	19	True	AATAAA	-22	NA	100373567	100388360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100374081_100381215_100381449_100388036
transcript_19387.known	chr10	+	12927	8	FSM	ENSG00000166135.14	ENST00000299163.7	12927	8	0	0	0	0	multi-exon	TRUE	canonical	3	513	junction_3	34.795026620927	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCTCTCTTTGGAAAAT	100527488	True	NA	10	True	ATTAAA	-23	NA	100535942	100559998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100536136_100536410_100536662_100540633_100540783_100544950_100545097_100545942_100546050_100546517_100546582_100547139_100547251_100548092
transcript_1939.known	chr1	+	809	6	FSM	ENSG00000177674.16	ENST00000452018.6	809	6	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	412.853000473534	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTCCCAGGCTGGA	11726768	True	NA	NA	False	NA	NA	NA	11736172	11750409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11736236_11745802_11745838_11746126_11746224_11747439_11747546_11748414_11748590_11750076
transcript_1940.known	chr1	+	1062	12	FSM	ENSG00000011021.23	ENST00000376492.3	1062	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	29.326038411719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTCATTCCAGCTCCAGG	11804328	True	NA	NA	False	NA	NA	NA	11806262	11829303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694_11822802_11823706_11823834_11824485_11824554_11826155_11826215_11827088_11827222_11828105_11828220_11829195
transcript_19402.known	chr10	-	713	5	FSM	ENSG00000166136.16	ENST00000370322.5	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	1579.51535288518	974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTGCCTCATTTCCC	-100529989	False	NA	-24	True	AATAAA	-14	NA	100530000	100523742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529857
transcript_1941.known	chr1	-	7018	12	FSM	ENSG00000177000.13	ENST00000376590.9	7018	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_11	8.42958191369355	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTACTGTCCTCGTGTACC	-11805117	True	NA	NA	False	AATAAA	-22	NA	11805964	11785722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11790899_11791206_11791327_11792277_11792380_11793906_11794090_11794357_11794539_11794728_11794864_11795097_11795349_11796205_11796400_11800211_11800323_11801160_11801400_11802880_11803130_11805887
transcript_19412.known	chr10	-	678	5	FSM	ENSG00000166136.16	ENST00000299166.9	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_1	411.526047170771	25508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-100502635	True	NA	-21	True	AATAAA	-17	NA	100529871	100523739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100523930_100526398_100526555_100526974_100527075_100529379_100529507_100529766
transcript_19413.known	chr10	-	390	2	FSM	ENSG00000166136.16	ENST00000464651.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	3	3330	junction_1	0	2336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGCCTCATTTCCCCAG	-100526587	False	NA	-21	True	AATAAA	-17	NA	100526598	100523739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100523930_100526398
transcript_19415.nic	chr10	+	1219	4	ISM	ENSG00000119906.13	ENST00000370271.7	2931	6	-11	8232	-11	4642	5prime_fragment	FALSE	canonical	3	54	junction_3	4.78423336480244	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCCTTCTTGGGGATGAA	100911516	True	NA	NA	False	AATAAA	-17	NA	100912951	100918528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_100913251_100915998_100916043_100916569_100917301_100918383
transcript_19420.nnic	chr10	-	543	2	Genic_Genomic	ENSG00000272572.1	novel	1637	1	NA	NA	-628	-1235	multi-exon	FALSE	canonical	3	8	junction_1	0	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTGTTTCTCATGAGT	-100913179	True	NA	-2	True	AATAAA	-22	NA	100913367	100912337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_-_100912524_100913010
transcript_19422.known	chr10	+	891	1	FSM	ENSG00000119906.13	ENST00000609386.1	891	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAACTTGGTACTGTCTTTT	100911560	True	NA	NA	False	AATAAA	-19	NA	100912995	100913886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100913000_100913900
transcript_19427.known	chr10	+	946	5	FSM	ENSG00000107815.10	ENST00000473656.5	946	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	54.4948392051945	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTATCCTGTGGTCCTGA	100980404	True	NA	NA	False	CATAAA	-15	NA	100987549	100993580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100987614_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_19433.known	chr10	+	3616	5	FSM	ENSG00000107815.10	ENST00000311916.8	3616	5	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	21.6679486800205	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTGTGCTTTTTCT	100980397	True	NA	14	True	ACTAAA	-17	NA	100987542	100994403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991011_100993189
transcript_19434.known	chr10	+	3665	5	FSM	ENSG00000107815.10	ENST00000370228.2	3665	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	46.7145587584856	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTGTTTCTGTGCTTTTT	100980390	True	NA	12	True	ACTAAA	-15	NA	100987535	100994401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100989454_100989643_100989885_100990435_100990544_100990868_100991055_100993189
transcript_19439.known	chr10	-	903	2	FSM	ENSG00000055950.17	ENST00000477279.1	903	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986976_100987312
transcript_19440.known	chr10	-	2134	5	FSM	ENSG00000055950.17	ENST00000318325.6	2134	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	253.610306375746	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGCTCTGAGTCTCTTCT	-100976740	True	NA	-6	True	AATAAA	-16	NA	100987497	100977820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100979373_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_19441.known	chr10	-	747	5	FSM	ENSG00000055950.17	ENST00000299179.9	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	238.890142115576	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-100976737	True	NA	-12	True	AGTAAA	-18	NA	100987494	100981375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100981544_100983754_100983818_100986748_100986976_100987089_100987197_100987312
transcript_19442.known	chr10	-	894	6	FSM	ENSG00000055950.17	ENST00000342071.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	244.263300559048	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCCAGGCTCTGTG	-100976758	True	NA	-13	True	AGTAAA	-17	NA	100987515	100981376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100981544_100983754_100983818_100983947_100984075_100986748_100986976_100987089_100987197_100987312
transcript_19443.known	chr10	-	727	6	FSM	ENSG00000055950.17	ENST00000448244.5	727	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	249.036061645698	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCAGGCTCTGTGT	-100976676	False	NA	-12	True	AGTAAA	-18	NA	100987433	100981375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100981544_100983754_100983818_100984033_100984075_100986748_100986976_100987089_100987197_100987312
transcript_19444.known	chr10	-	1010	3	FSM	ENSG00000055950.17	ENST00000318364.13	999	3	-18	7	0	0	multi-exon	FALSE	canonical	3	514	junction_1	18.5	5042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976758	True	NA	-42	True	AATAAA	-15	NA	100987515	100986275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986976_100987089_100987197_100987312
transcript_19445.known	chr10	-	897	2	FSM	ENSG00000055950.17	ENST00000493646.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	514	junction_1	0	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTCAGGTCTGTCTTCAA	-100976529	False	NA	-42	True	AATAAA	-15	NA	100987286	100986275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986976_100987089
transcript_19446.known	chr10	-	798	4	FSM	ENSG00000055950.17	ENST00000370234.4	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	240.655124376958	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACATTTCAGGTCTGTCT	-100976726	True	NA	-46	True	AATAAA	-11	NA	100987483	100986279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986573_100986748_100986976_100987089_100987197_100987312
transcript_19447.known	chr10	-	866	4	FSM	ENSG00000055950.17	ENST00000370236.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	238.302795246347	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGTCTGTCTTCAAAA	-100976726	True	NA	-40	True	AATAAA	-17	NA	100987483	100986273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_100986573_100986686_100986976_100987089_100987197_100987312
transcript_19448.known	chr10	-	2032	10	FSM	ENSG00000186862.20	ENST00000370215.7	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.26623089493013	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACATCATCAGACATCTG	-101030989	True	NA	NA	False	NA	NA	NA	101031133	101017331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101017616_101018098_101018297_101018821_101019218_101020617_101020679_101021797_101021946_101022208_101022386_101023435_101023611_101023927_101024069_101029993_101030385_101031072
transcript_1945.known	chr1	+	814	6	FSM	ENSG00000011021.23	ENST00000376497.7	814	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	48.939145885477	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAACATCAATGGCTGGG	11804278	True	NA	NA	False	AAAACA	-7	NA	11806212	11820779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11820361
transcript_19450.known	chr10	+	2883	5	FSM	ENSG00000107816.17	ENST00000370223.7	2883	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	161.476778516293	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATGTGCTGGATAAAG	100994408	True	NA	NA	False	ATTAAA	-25	NA	100997071	101007836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_100997235_101002496_101002947_101003506_101004167_101005457_101005716_101006484
transcript_19453.known	chr10	-	1057	4	FSM	ENSG00000186862.20	ENST00000470414.1	1057	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.49443825784929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGGGCAACATAGCAAGA	-101030970	True	NA	NA	False	AAAACA	-45	NA	101031114	101023127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101023611_101023927_101024069_101029993_101030385_101031072
transcript_19456.known	chr10	-	977	1	FSM	ENSG00000273162.1	ENST00000609242.1	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTTTTAGAAGGGAGTTTT	-101060946	True	NA	NA	False	ATTAAA	-20	NA	101061005	101060028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101060000_101061000
transcript_19458.known	chr10	+	754	4	FSM	ENSG00000107821.15	ENST00000477979.5	754	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.6144555520604	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGTAGGGAGAGAAGCT	101061795	False	NA	NA	False	NA	NA	NA	101062003	101065103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101062116_101064205_101064422_101064500_101064649_101064825
transcript_19463.nnic	chr10	-	785	3	Antisense	novelGene_ENSG00000237579.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGAGCCTCTTGGTGGTC	NA	False	NA	NA	False	AATAAA	-16	NA	101189760	101183796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_-_101184285_101188875_101189049_101189636
transcript_19468.known	chr10	+	6024	15	FSM	ENSG00000166167.18	ENST00000370187.8	6024	15	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	26.2180806906616	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTAAGCGTCTTGTCTC	101351651	True	NA	15	True	ATTAAA	-6	NA	101354164	101557313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101430344_101430453_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_19473.known	chr10	+	6084	14	FSM	ENSG00000166167.18	ENST00000393441.8	6084	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	44.215181199682	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCGTCTTGTCTCCTTGCC	NA	False	NA	21	True	ATTAAA	-12	NA	101354032	101557319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101430344_101430453_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_19475.known	chr10	+	5982	14	FSM	ENSG00000166167.18	ENST00000408038.6	5982	14	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	27.3997365339555	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTTGTCTCCTTGCCCC	101351593	True	NA	23	True	ATTAAA	-14	NA	101354106	101557321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101461980_101462059_101479367_101479458_101521638_101521871_101526012_101526200_101531236_101531334_101532294_101532433_101532951_101533071_101534660_101534911_101535353_101535473_101536542_101536654_101538292_101538372_101550698_101550892_101553154
transcript_19484.nnic	chr10	+	1170	3	NNC	ENSG00000166167.18	novel	527	5	NA	NA	22	-84439	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	46.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTATGGAATATGTACATT	101351615	True	NA	NA	False	AATAAA	-14	NA	101354128	101437273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_101354229_101430344_101430453_101436311
transcript_19485.known	chr10	+	527	5	FSM	ENSG00000166167.18	ENST00000475200.5	527	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.3086394326133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGAACTGTGTGTCAAAT	101351555	True	NA	NA	False	NA	NA	NA	101354068	101521712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101354229_101430344_101430453_101461963_101462059_101479367_101479458_101521638
transcript_19487.known	chr10	-	2781	9	FSM	ENSG00000166169.17	ENST00000370162.8	2781	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	25.3475837112732	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586445	False	NA	-5	True	AGTAAA	-18	NA	101588257	101578881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587821
transcript_19488.known	chr10	-	2670	9	FSM	ENSG00000166169.17	ENST00000299206.8	2670	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_8	21.5928228816892	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586397	True	NA	-5	True	AGTAAA	-18	NA	101588209	101578881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245_101587407_101587884
transcript_1949.nic	chr1	+	904	6	ISM	ENSG00000011021.23	ENST00000376490.7	963	11	-57	5023	-7	2416	5prime_fragment	FALSE	canonical	3	90	junction_5	15.2525407719501	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCAAGTCTGGCCACTTTG	11804271	True	NA	NA	False	AATAAA	-26	NA	11806205	11823195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694
transcript_19498.known	chr10	+	641	7	FSM	ENSG00000166171.13	ENST00000370147.5	641	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	242.784998621323	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGGGACTGCAAGACCCA	101583266	True	NA	NA	False	ACTAAA	-26	NA	101588324	101609447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101605139_101605213_101608866_101608938_101609366
transcript_1950.nic	chr1	+	1198	6	ISM	ENSG00000011021.23	ENST00000376490.7	963	11	-57	4729	-7	2710	5prime_fragment	FALSE	canonical	3	90	junction_5	15.2525407719501	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAGTGCAAGTCCT	11804271	True	NA	NA	False	NA	NA	NA	11806205	11823489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487_11819555_11822694
transcript_19511.known	chr10	+	819	6	FSM	ENSG00000166171.13	ENST00000370151.9	819	6	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_4	41.5855744219074	3433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGACTGCCCTCTTGTTC	101583262	True	NA	32	True	AGTAAA	-24	NA	101588320	101609662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101588401_101594657_101594739_101600737_101600863_101601202_101601337_101608834_101608938_101609366
transcript_19515.known	chr10	-	1953	6	FSM	ENSG00000166169.17	ENST00000628479.2	1953	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	39.1744814898679	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGCCTGGTGTCTGAGC	NA	False	NA	-7	True	AGTAAA	-16	NA	101588270	101578883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245_101587407_101587884
transcript_19544.known	chr10	-	2360	8	FSM	ENSG00000166169.17	ENST00000370169.5	2360	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_5	8.09635846588843	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101585609	False	1812	-5	True	AGTAAA	-18	NA	101587421	101578881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101584601_101584920_101585315_101585479_101585861_101586157_101587245
transcript_19545.known	chr10	-	2289	5	FSM	ENSG00000166169.17	ENST00000339310.7	2289	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	38.7846619167939	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGGTGTCTGAGCTG	-101586314	True	NA	-5	True	AGTAAA	-18	NA	101588126	101578881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101579818_101580247_101580417_101582762_101582892_101583507_101583682_101587245
transcript_19546.nic	chr10	-	1753	9	NIC	ENSG00000107829.15	novel	2394	9	NA	NA	-93	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	38.0507473645394	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGGTTCCTCACTGGCT	NA	False	NA	-13	True	AATAAA	-16	NA	101695388	101610665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_101611411_101611627_101611770_101612336_101612478_101624744_101624811_101667885_101667981_101672914_101673048_101673487_101673674_101676340_101676437_101695239
transcript_1955.nnic	chr1	+	549	5	NNC	ENSG00000011021.23	novel	814	6	NA	NA	-42	-2651	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	52.6212884676915	86	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGGTATTTATTTTGC	NA	False	NA	NA	False	AATAAA	-22	NA	11806148	11818128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11817972
transcript_19551.known	chr10	-	755	5	FSM	ENSG00000107833.10	ENST00000474993.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	30.3016088681773	1573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCAGCTCTTGTGTGGC	-101765883	True	NA	-13	True	AATAAA	-13	NA	101783384	101781331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101783272
transcript_19556.known	chr10	-	877	6	FSM	ENSG00000107833.10	ENST00000370110.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	7.19444229944198	6397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTGTGGCTTCTTCC	-101765912	True	NA	-6	True	AATAAA	-20	NA	101783413	101781324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101781633_101781726_101781855_101782257_101782352_101782477_101782598_101782838_101782925_101783272
transcript_19557.known	chr10	-	393	3	FSM	ENSG00000107833.10	ENST00000468544.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTGCGGGGAGAAGTG	-101782636	False	NA	NA	False	AAAAAG	-28	NA	101782648	101781726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101781855_101782257_101782352_101782477
transcript_19558.known	chr10	-	5174	16	FSM	ENSG00000198408.14	ENST00000361464.8	5174	16	0	0	0	0	multi-exon	FALSE	canonical	3	466	junction_2	174.480562432228	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTCGTGTTGTATTGT	-101800977	True	NA	-7	True	AATAAA	-13	NA	101818444	101784449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101786588_101787363_101787524_101790895_101791089_101791353_101791440_101792838_101792944_101793912_101793999_101797979_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_19559.known	chr10	-	3314	10	FSM	ENSG00000198408.14	ENST00000370094.7	3314	10	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_3	187.621960335138	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGTT	-101800951	True	NA	NA	False	NA	NA	NA	101818418	101797045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101798155_101798841_101799456_101800241_101800401_101803734_101804020_101806044_101806144_101807729_101807902_101810183_101810315_101813029_101813128_101813554_101813607_101817823
transcript_1956.nic	chr1	+	686	5	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	10	925	-8	-925	5prime_fragment	FALSE	canonical	3	122	junction_2	4.12310562561766	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTAAATTTGTGTAG	11804288	True	NA	28	True	AATAGA	-22	NA	11806222	11819854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487
transcript_19560.nnic	chr10	-	1159	8	NNC	ENSG00000120049.20	novel	2089	8	NA	NA	-21	2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	8.87095696929144	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCCGTCTCTGCCTTTT	NA	False	NA	-1	True	AATAAA	-19	NA	101839893	101825971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_101826448_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_19562.known	chr10	-	2089	8	FSM	ENSG00000120049.20	ENST00000348850.9	2089	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	6.06428150765461	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCCGTCTCTGCCTT	-101839590	True	NA	-3	True	AATAAA	-17	NA	101839872	101825973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101827401_101827688_101827752_101827888_101827994_101828150_101828259_101828388_101828460_101828626_101828697_101829074_101829200_101839752
transcript_19566.known	chr10	+	1234	3	FSM	ENSG00000226009.2	ENST00000412353.2	1234	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACAGTCTACAGGCGCCA	101818742	True	NA	NA	False	AATAAA	-16	NA	101818799	101828885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_101819249_101827859_101827940_101828180
transcript_19569.nnic	chr10	+	709	3	Antisense	novelGene_ENSG00000120049.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGACTAATGTGATACTA	101839891	True	NA	NA	False	ATTAAA	-13	NA	101839904	101841826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_101840028_101840488_101840612_101841363
transcript_1957.nic	chr1	+	1017	5	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	9	595	9	-595	5prime_fragment	FALSE	canonical	3	122	junction_2	4.12310562561766	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACACATCTCTGTAGTCC	11804287	True	NA	NA	False	AATAAA	-28	NA	11806221	11820184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614_11816681_11819487
transcript_19572.known	chr10	-	4099	26	FSM	ENSG00000120029.13	ENST00000370033.9	4099	26	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_4	23.2804123674818	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTGTTGCTTTTTTTTT	-102053398	True	NA	0	True	ATTAAA	-23	NA	102056173	101845598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_101847621_101849775_101849893_101889411_101889491_101939862_101939939_101956596_101956724_101957649_101957733_101975211_101975301_101990550_101990612_101991968_101992039_101993537_101993604_101995296_101995356_102001970_102002073_102006539_102006634_102009373_102009450_102009976_102010024_102011722_102011784_102012832_102012877_102013967_102014025_102023476_102023564_102023674_102023750_102025155_102025249_102029637_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_19583.known	chr10	-	724	5	FSM	ENSG00000120029.13	ENST00000311122.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_4	6.04152298679729	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAATGGAGGTATTCTTT	-102053418	True	NA	-4	True	AATAAA	-20	NA	102056193	102029447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102029746_102033025_102033173_102033282_102033340_102040012_102040126_102056084
transcript_19589.known	chr10	-	3098	11	FSM	ENSG00000198728.11	ENST00000673968.1	3098	11	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	85.6213174390584	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTCCTGGTTGGTCATT	-102115928	True	NA	-7	True	AATAAA	-18	NA	102120368	102106488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102108324_102109028_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102120085
transcript_19590.known	chr10	-	1938	11	FSM	ENSG00000198728.11	ENST00000425280.2	1938	11	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	97.4168363271976	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCATGTCCCCCCCTCT	-102120261	False	NA	-2	True	ATTAAA	-21	NA	102120285	102107559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102108324_102109034_102109178_102109383_102109508_102109599_102109684_102109920_102110044_102110528_102110702_102110868_102110972_102111068_102111145_102111255_102111301_102111433_102111537_102120085
transcript_19594.known	chr10	+	2441	13	FSM	ENSG00000166197.17	ENST00000488254.6	2441	13	0	0	0	0	multi-exon	FALSE	canonical	3	740	junction_2	204.493276173081	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTGTGATTTTCAAA	102127047	True	NA	4	True	ATTAAA	-15	NA	102152403	102162600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102157018_102157075_102157185_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_19598.known	chr10	+	3967	13	FSM	ENSG00000166197.17	ENST00000405356.5	3967	13	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	340.798195010218	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGAGTTTTATTATTGT	NA	False	NA	16	True	AATAAA	-21	NA	102152175	102163871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_19602.known	chr10	+	3723	13	FSM	ENSG00000166197.17	ENST00000605788.6	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_2	207.306067338984	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127032	True	NA	15	True	AATAAA	-20	NA	102152388	102163870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_19606.known	chr10	+	3727	13	FSM	ENSG00000166197.17	ENST00000370007.5	3727	13	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_6	340.798195010218	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGAGTTTTATTATTG	102127058	True	NA	15	True	AATAAA	-20	NA	102152414	102163870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102157018_102157075_102157188_102157329_102157430_102157556_102158048_102158215_102159192_102159339_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_19622.known	chr10	+	3217	9	FSM	ENSG00000166197.17	ENST00000603946.5	3217	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	412.130269908678	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	102127047	True	NA	11	True	AATAAA	-16	NA	102152403	102163866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102152531_102159192_102159309_102159432_102159569_102159895_102160025_102160232_102160344_102160451_102161094_102161555_102161663_102161832_102161926_102162110
transcript_19632.known	chr10	+	660	4	FSM	ENSG00000166197.17	ENST00000477977.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	625.746132406923	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGGGAGTTTTATT	102160719	False	NA	11	True	AATAAA	-16	NA	102160729	102163866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102161094_102161555_102161663_102161832_102161926_102163770
transcript_19633.known	chr10	+	1400	4	FSM	ENSG00000119915.5	ENST00000370005.4	1400	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGAGTTGGGGGATTT	NA	False	NA	NA	False	ATTAAA	-14	NA	102226298	102229589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102226650_102227625_102227758_102228416_102228569_102228824
transcript_19636.known	chr10	+	1340	4	FSM	ENSG00000107872.14	ENST00000369956.8	1340	4	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	53.7959106252511	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCCTGGTGCTGCCCTG	102420620	True	NA	29	True	AATAAA	-16	NA	102420835	102423136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102421183_102421353_102421508_102421786_102422293_102422803
transcript_19650.nnic	chr10	-	432	2	NNC	ENSG00000107874.11	novel	1100	9	NA	NA	-33	-7091	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGAGAATAACAGTATCT	-102423937	True	NA	NA	False	AATAAA	-20	NA	102432617	102431121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_102431462_102432525
transcript_19652.known	chr10	-	1100	9	FSM	ENSG00000107874.11	ENST00000369937.5	1100	9	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_4	45.868698477284	4426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGAGTGCATTCTGGTC	-102423894	True	NA	-11	True	AGTAAA	-15	NA	102432574	102423248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102423573_102423656_102423718_102423797_102423860_102423995_102424179_102424263_102424395_102424498_102424561_102424648_102424793_102425114_102425199_102432525
transcript_19653.known	chr10	+	1483	5	FSM	ENSG00000269609.6	ENST00000663480.1	1483	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	65.3031392813546	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAAACTTGTCTTGTTTT	102449004	True	NA	-19	True	NA	NA	NA	102449869	102456267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450331_102451398_102451556_102452089_102452188_102455336
transcript_19654.nnic	chr10	+	1522	4	NIC	ENSG00000269609.6	novel	1556	5	NA	NA	-57	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_2	67.9264307909668	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	NA	False	NA	7	True	AATAAA	-20	NA	102449758	102456293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_102450023_102450186_102450331_102451398_102451556_102455336
transcript_19656.nnic	chr10	+	1385	4	NIC	ENSG00000269609.6	novel	1556	5	NA	NA	-16	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_2	69.3124968690511	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	102448971	True	NA	7	True	AATAAA	-20	NA	102449836	102456293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_102450023_102450186_102450331_102452089_102452188_102455336
transcript_19659.known	chr10	+	1312	3	FSM	ENSG00000269609.6	ENST00000473970.3	1312	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	29.5	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	NA	False	NA	11	True	AATAAA	-24	NA	102449815	102456297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450331_102455336
transcript_19660.known	chr10	+	1178	3	FSM	ENSG00000269609.6	ENST00000669625.1	1178	3	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_2	85.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTGGTGATTTGTTACA	102449114	False	NA	11	True	AATAAA	-24	NA	102449979	102456297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450361_102455336
transcript_19662.known	chr10	+	1556	5	FSM	ENSG00000269609.6	ENST00000492465.2	1556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	71.4860126178541	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTTGTGGTGATTTGT	102448987	True	NA	7	True	AATAAA	-20	NA	102449852	102456293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102450023_102450186_102450361_102451398_102451556_102452089_102452188_102455336
transcript_19663.known	chr10	+	2852	10	FSM	ENSG00000138111.14	ENST00000238936.8	2852	10	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_2	37.500946490113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGCTGTGTGAGTGAG	102459018	True	NA	23	True	ATTAAA	-23	NA	102461394	102477045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102461451_102465981_102466088_102468954_102469198_102469992_102470076_102470664_102471118_102471272_102471397_102472853_102472951_102473569_102473742_102473818_102474013_102475721
transcript_19677.known	chr10	+	823	6	FSM	ENSG00000138111.14	ENST00000369931.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	56.5650068505255	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCACTAATGTGTTT	102459036	True	NA	8	True	AATAAA	-20	NA	102461412	102472250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102461451_102465981_102466088_102468954_102469198_102469992_102470076_102471272_102471397_102472021
transcript_1968.known	chr1	+	783	4	FSM	ENSG00000215910.8	ENST00000482358.1	783	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	11787746	True	NA	NA	False	AATAAA	-19	NA	11787811	11789585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11788048_11788242_11788379_11788651_11788747_11789269
transcript_19683.known	chr10	-	2830	11	FSM	ENSG00000138107.13	ENST00000369905.9	2830	11	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_5	38.6735051424098	997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCCTCTATCTGTCTG	-102485824	True	NA	-9	True	AATAAA	-22	NA	102502712	102479228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102480966_102481131_102481173_102481836_102481899_102482000_102482176_102483010_102483104_102484159_102484377_102485608_102485734_102488149_102488276_102489062_102489139_102490548_102490614_102502599
transcript_19692.known	chr10	-	3834	6	FSM	ENSG00000138175.9	ENST00000260746.6	3834	6	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_5	104.062673423279	5302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAGCCTGGAATGTGTTGT	-102699532	True	NA	-10	True	AATAAA	-17	NA	102714397	102673730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_102676942_102685815_102686002_102689892_102689944_102699372_102699490_102705345_102705490_102714272
transcript_19694.known	chr10	+	6770	12	FSM	ENSG00000156398.13	ENST00000369893.10	6770	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.87190841846882	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCCTCTTCAGGAGC	102713438	True	NA	NA	False	ATTAAA	-18	NA	102714635	102743492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102714682_102726611_102726798_102726986_102727158_102728430_102728530_102729318_102729395_102729722_102729809_102731722_102731784_102732151_102732219_102732858_102732909_102733553_102733604_102735861_102735910_102737662
transcript_1970.nic	chr1	+	533	4	ISM	ENSG00000011021.23	ENST00000376497.7	814	6	-64	3959	-42	-3959	5prime_fragment	FALSE	canonical	3	122	junction_2	3.39934634239519	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGAGTGCCTTTTCTTTT	NA	False	NA	NA	False	NA	NA	NA	11806148	11816820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_11806350_11807130_11807191_11815845_11815912_11816614
transcript_19700.known	chr10	+	4129	4	FSM	ENSG00000166272.18	ENST00000448841.7	4129	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	12.657891697365	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGCTCTTTCTTGCT	102742045	True	NA	14	True	AATAAA	-16	NA	102743947	102816262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102744144_102797992_102798096_102809892_102810055_102812594
transcript_19707.known	chr10	+	1723	13	NNC	ENSG00000214435.9	novel	2450	11	NA	NA	46	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_10	22.596091107387	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACATCTTTGAATCAAG	102867713	True	NA	6	True	AATAAA	-16	NA	102869515	102901894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890655_102890655_102890679_102900592_102900800_102901474
transcript_19720.known	chr10	+	2450	11	FSM	ENSG00000214435.9	ENST00000369880.8	2450	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	9.68297474952816	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTTGAATCAAGTATCT	102867667	True	NA	11	True	AATAAA	-21	NA	102869469	102901899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102869594_102869804_102869846_102870083_102870212_102872447_102872599_102873096_102873234_102874591_102874662_102876953_102877036_102878378_102878511_102878848_102878992_102890543_102890679_102900592
transcript_1973.nnic	chr1	+	901	3	NIC	ENSG00000215910.8	novel	4672	21	NA	NA	-119	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	11787692	11789585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11788048_11788148_11788379_11789269
transcript_1975.nnic	chr1	+	806	3	NIC	ENSG00000215910.8	novel	783	4	NA	NA	-118	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	11787693	11789585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11788048_11788242_11788379_11789269
transcript_19759.known	chr10	+	838	6	FSM	ENSG00000166275.16	ENST00000369883.3	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	19.3142434488126	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTCATATTGTTATTG	102853650	True	NA	NA	False	AATAAA	-23	NA	102854261	102864213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_102854428_102860331_102860395_102860497_102860542_102862159_102862181_102862872_102862933_102863729
transcript_19766.known	chr10	-	3525	19	FSM	ENSG00000076685.19	ENST00000404739.8	3525	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_17	76.4417998573562	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTTCTAACATGATTAT	-103185664	True	NA	-32	True	AATAAA	-15	NA	103193272	103088037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103181184_103181329_103193235
transcript_1977.nnic	chr1	+	675	2	NIC	ENSG00000215910.8	novel	783	4	NA	NA	-123	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCTTTCAGTCTCTC	NA	False	NA	NA	False	AATAAA	-19	NA	11787688	11789585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_11788048_11789269
transcript_19777.known	chr10	-	3435	18	FSM	ENSG00000076685.19	ENST00000343289.9	3435	18	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_17	44.8160407516161	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGGTGTTACATAGGC	-103185698	True	NA	-12	True	AATAAA	-35	NA	103193306	103088017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103089909_103090610_103090788_103090935_103090997_103091563_103091616_103093138_103093310_103093971_103094039_103094347_103094456_103095938_103095981_103097290_103097375_103098930_103098985_103099925_103100020_103101044_103101103_103101234_103101327_103105705_103105802_103106588_103106707_103139405_103139480_103174857_103174983_103193235
transcript_1978.known	chr1	-	708	3	FSM	ENSG00000120937.9	ENST00000376468.4	708	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGAAACTGATTTGTC	NA	False	NA	NA	False	AATAAA	-20	NA	11858945	11857463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_11857672_11858213_11858470_11858701
transcript_19787.nnic	chr10	-	1471	4	NNC	ENSG00000076685.19	novel	4688	20	NA	NA	-10	27236	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	28.6123516451666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTCTTTGCTTGGTTAT	-103185708	True	NA	-1	True	AATAAA	-22	NA	103193316	103142047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_103143169_103174857_103174983_103181184_103181329_103193235
transcript_19789.nic	chr10	-	516	4	NIC	ENSG00000076685.19	novel	427	3	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	31.5841028929991	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	-103185708	True	NA	-1	True	AATAAA	-41	NA	103193316	103169283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_103169450_103174857_103174983_103181184_103181329_103193235
transcript_1979.known	chr1	+	2976	19	FSM	ENSG00000083444.17	ENST00000196061.5	2976	19	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	18.8243997166273	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGGAAGATGCTCAGG	11929386	True	NA	26	True	ATTAAA	-15	NA	11934716	11975537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11934856_11947975_11948068_11949772_11949907_11950356_11950521_11952622_11952736_11954829_11954894_11956916_11957015_11957841_11957944_11958515_11958648_11960645_11960768_11963531_11963637_11964174_11964301_11964643_11964786_11965479_11965594_11966250_11966317_11966986_11967092_11970669_11970817_11972871_11972998_11974652
transcript_19795.nic	chr10	-	367	3	NIC	ENSG00000076685.19	novel	427	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	77.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	-103185703	True	NA	-1	True	AATAAA	-41	NA	103193311	103169283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_103169450_103174857_103174983_103193235
transcript_19797.known	chr10	-	427	3	FSM	ENSG00000076685.19	ENST00000467380.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	22.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTGTGTATATGTA	-103181025	True	NA	-1	True	AATAAA	-41	NA	103181320	103169283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103169450_103174857_103174983_103181184
transcript_19799.known	chr10	-	2236	10	FSM	ENSG00000156374.16	ENST00000369847.4	2236	10	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	15.9358281016065	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348232	True	NA	-2	True	AATAAA	-17	NA	103351140	103302795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347298_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_19800.known	chr10	-	1868	10	FSM	ENSG00000156374.16	ENST00000490296.1	1868	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.0704275390326	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTGAGAAGTTTACAGAA	-103348173	True	NA	NA	False	AATAAA	-13	NA	103351081	103303126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103345023_103345133_103347237_103347320_103347394_103347451_103348715_103348813_103348899_103349000_103350706
transcript_19805.known	chr10	-	1950	7	FSM	ENSG00000156374.16	ENST00000337211.8	1950	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.0245668464001	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGAATGTTAGTGTTTA	-103348171	True	NA	-2	True	AATAAA	-17	NA	103351079	103302795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103303962_103314185_103314273_103326533_103326633_103333924_103333953_103348715_103348813_103348899_103349000_103350706
transcript_19807.nic	chr10	-	705	4	ISM	ENSG00000156374.16	ENST00000490296.1	1868	10	-77	44268	-14	960	5prime_fragment	FALSE	canonical	3	125	junction_3	4.49691252107735	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTTCTTTTATTACAT	NA	False	NA	3	True	NA	NA	NA	103351158	103347394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_103347451_103348715_103348813_103348899_103349000_103350706
transcript_19809.known	chr10	-	882	6	FSM	ENSG00000173915.16	ENST00000369825.6	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	2984.60393352284	2608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTACAAGATATCAA	-103360144	True	NA	8	True	AATAAA	-26	NA	103396492	103389040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103395745_103396033_103396408
transcript_19815.known	chr10	-	560	5	FSM	ENSG00000173915.16	ENST00000337003.4	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	3057.57007278656	3156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103394198_103394395_103396408
transcript_19819.known	chr10	-	660	5	FSM	ENSG00000173915.16	ENST00000369815.6	660	5	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_4	2940.53677072741	5929	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360127	True	NA	-1	True	AATAAA	-17	NA	103396475	103389049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745_103396033_103396408
transcript_1982.known	chr1	+	4407	19	FSM	ENSG00000116688.18	ENST00000235329.10	4407	19	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	44.934520261277	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAGATCTGTCTTTTT	11970192	True	NA	10	True	AATAAA	-17	NA	11980443	12013508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_11980485_11981969_11982115_11989164_11989344_11992554_11992691_11996155_11996319_11997296_11997422_11998769_11998879_11998987_11999096_12001400_12001555_12001768_12001837_12001981_12002104_12003991_12004119_12004508_12004614_12004824_12004928_12005710_12005932_12006537_12006694_12007052_12007250_12009591_12009727_12011495
transcript_19833.known	chr10	-	364	4	FSM	ENSG00000173915.16	ENST00000309579.7	364	4	0	0	0	0	multi-exon	FALSE	canonical	3	5118	junction_3	577.987504670781	44392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103360118	True	NA	-1	True	AATAAA	-17	NA	103396466	103389049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103396408
transcript_19834.known	chr10	-	635	4	FSM	ENSG00000173915.16	ENST00000369811.5	635	4	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_3	2730.69307441658	2830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTTGTCTTTATTTACA	-103359726	False	NA	-1	True	AATAAA	-17	NA	103396074	103389049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103389167_103392190_103392284_103392370_103392467_103395745
transcript_19835.known	chr10	+	6477	36	FSM	ENSG00000148843.15	ENST00000369797.8	6477	36	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_12	38.7657959904799	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTAAGTGTCCTGAGAGC	103389272	True	NA	16	True	ATTAAA	-17	NA	103396625	103446294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_103396731_103398415_103398529_103400396_103400529_103403117_103403286_103405021_103405184_103405984_103406109_103406608_103406791_103409698_103409807_103413115_103413323_103413965_103414091_103414269_103414331_103415004_103415152_103416490_103416743_103417791_103417933_103418439_103418635_103419537_103419709_103421347_103421568_103422987_103423138_103423542_103423659_103424983_103425526_103427328_103427392_103432128_103432235_103433947_103434038_103434247_103434351_103434797_103434976_103438014_103438072_103438685_103438809_103439745_103439869_103440289_103440582_103440733_103440851_103441825_103441976_103442212_103442461_103443164_103443334_103443914_103444069_103444516_103444683_103445377
transcript_19842.nic	chr10	+	441	4	ISM	ENSG00000148843.15	ENST00000493610.2	732	6	-24	4640	0	-4640	5prime_fragment	FALSE	canonical	3	9	junction_2	160.279616781285	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGGGGCCAGCAAAAAC	103389272	True	NA	NA	False	AAAAAG	-4	NA	103396625	103400435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_103396731_103398415_103398529_103399646_103399831_103400396
transcript_19844.nnic	chr10	+	354	4	NNC	ENSG00000148843.15	novel	732	6	NA	NA	0	-4640	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	160.757235883455	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGGGGCCAGCAAAAAC	103389272	True	NA	NA	False	AAAAAG	-4	NA	103396625	103400435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_103396731_103398415_103398529_103399733_103399831_103400396
transcript_19846.nic	chr10	+	283	3	ISM	ENSG00000148843.15	ENST00000649849.1	6467	36	0	45820	0	-4614	5prime_fragment	FALSE	canonical	3	290	junction_2	30	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTGAAAATCGAAAAGAGAG	103389272	True	NA	NA	False	AAAAAG	-30	NA	103396625	103400461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_103396731_103398415_103398529_103400396
transcript_19847.known	chr10	-	1843	4	FSM	ENSG00000138172.11	ENST00000369788.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGCCTGGTGTCTGTGTGA	-103452287	True	NA	NA	False	GATAAA	-20	NA	103452402	103446785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103447569_103449386_103450100_103451082_103451183_103452155
transcript_19849.known	chr10	+	657	2	FSM	ENSG00000234699.1	ENST00000411906.1	657	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTTACTGTGGCCCA	103452817	False	NA	NA	False	AATAAA	-19	NA	103452845	103462695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_103453237_103462429
transcript_19851.known	chr10	-	1652	3	FSM	ENSG00000183128.7	ENST00000369783.4	1652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCATTTGTGTAATTGTC	NA	False	NA	NA	False	NA	NA	NA	103479240	103472803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103473705_103476293_103476550_103478745
transcript_19852.known	chr10	+	4314	6	FSM	ENSG00000107954.11	ENST00000369780.9	4582	6	274	-6	274	6	multi-exon	FALSE	canonical	0	0	junction_1	3.32264954516723	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCGGTGCTGTGCGCAGAG	103493963	False	NA	NA	False	AATAAA	-22	NA	103493978	103592552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_103494473_103570871_103571114_103571500_103571823_103584535_103585226_103589513_103589661_103590133
transcript_19854.known	chr10	-	1414	11	FSM	ENSG00000107960.11	ENST00000466828.5	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	66.7997005981314	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	-103915982	True	NA	-11	True	AATAAA	-13	NA	103918130	103882554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898292_103898378_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_19857.known	chr10	-	6369	10	FSM	ENSG00000107960.11	ENST00000224950.8	6369	10	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_9	24.2766971536772	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGCAAAAGGTTCTGTG	-103916036	True	NA	-7	True	AATAAA	-20	NA	103918184	103877568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461_103917657_103918099
transcript_19863.known	chr10	-	1311	9	FSM	ENSG00000107960.11	ENST00000369764.1	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	17.8671311351319	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCTTGGGAATGGGATT	-103917653	False	NA	-11	True	AATAAA	-13	NA	103917669	103882554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_103882842_103889071_103889145_103892129_103892253_103897547_103897720_103898876_103899001_103900061_103900224_103905090_103905157_103910526_103910623_103917461
transcript_19864.known	chr10	+	7827	19	FSM	ENSG00000065613.15	ENST00000369755.4	7827	19	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	17.3501520966756	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGAAGCAGTCTTTTA	103965012	True	NA	10	True	AATAAA	-17	NA	103967139	104029233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_103967896_103990674_103990840_103992597_103992647_103992983_103993134_103998898_103998972_103999118_103999314_103999866_103999949_104001443_104001573_104002171_104003528_104005560_104005692_104005911_104006036_104008176_104008357_104010815_104010909_104018159_104018290_104018783_104018909_104019733_104019923_104020487_104020614_104021619_104021734_104025573
transcript_19868.nnic	chr10	-	729	4	Intergenic	novelGene_5	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCATTTGGTTTTTTTG	-103967034	True	NA	-5	True	AATAAA	-16	NA	103967100	103965595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr10_-_103965914_103966098_103966241_103966730_103966906_103967006
transcript_19872.known	chr10	+	1503	4	FSM	ENSG00000156384.15	ENST00000369729.7	1503	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	62.5264388523411	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTGTCTCTTCAAA	104122013	False	NA	11	True	ATTAAA	-21	NA	104122057	104126385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104122155_104122964_104123087_104123713_104124125_104125512
transcript_19876.known	chr10	+	1430	4	FSM	ENSG00000156384.15	ENST00000369727.4	1430	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	34.7658836600865	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTCCCTGTCTCTTCA	104121098	True	NA	9	True	ATTAAA	-19	NA	104122170	104126383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104122197_104122964_104123087_104123713_104124125_104125512
transcript_19884.known	chr10	-	1434	8	FSM	ENSG00000197748.13	ENST00000369719.2	1434	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.19522860933439	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCTTGTTTTTTTCCA	-104232250	True	NA	NA	False	AATAAA	-19	NA	104232340	104203429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_104203804_104205962_104206034_104207664_104207825_104212006_104212158_104214258_104214427_104225460_104225558_104230589_104230844_104232181
transcript_19886.nnic	chr10	+	411	2	Antisense	novelGene_ENSG00000197748.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAACAGACTTTCATT	104231735	True	NA	NA	False	AATAAA	-25	NA	104231849	104232966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr10_+_104231921_104232626
transcript_19904.known	chr10	+	1052	6	FSM	ENSG00000148834.13	ENST00000539281.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	423.71811384457	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAGCATGCTTTTATT	104253255	True	NA	32	True	AATAAA	-32	NA	104254193	104267459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_1992.known	chr1	+	1541	10	FSM	ENSG00000116691.11	ENST00000235332.6	1541	10	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_2	84.4261676127596	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCACGTGTGCTGGTTCC	12010930	True	NA	31	True	AATAAA	-22	NA	12019497	12032045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_12019553_12021644_12021841_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_19921.known	chr10	+	813	6	FSM	ENSG00000148834.13	ENST00000369713.10	813	6	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	105.281717311222	13748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAATAATAGCATGCTTT	104244589	True	NA	28	True	AATAAA	-28	NA	104254891	104267455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104254963_104255162_104255272_104259575_104259799_104262978_104263078_104266083_104266191_104267251
transcript_19922.known	chr10	+	874	5	FSM	ENSG00000148834.13	ENST00000493946.1	874	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	462.504256737168	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATATTTGAATATTTT	104254140	False	NA	NA	False	AATGAA	-10	NA	104254163	104266190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104254500_104255162_104255272_104259575_104259799_104262978_104263078_104266083
transcript_19923.known	chr10	+	6715	7	FSM	ENSG00000065621.15	ENST00000338595.7	6715	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	46.5856439498503	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGAATCTCGCTACTCTG	104269096	True	NA	28	True	AATAAA	-28	NA	104269183	104304950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_19925.known	chr10	+	1391	6	FSM	ENSG00000065621.15	ENST00000450629.6	1391	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	57.1790171304124	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCTGATAATCATTTG	104268807	False	NA	17	True	AATAAA	-18	NA	104268872	104299417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104269270_104274684_104274950_104275225_104275335_104277893_104278117_104297577_104297685_104299127
transcript_19929.known	chr10	+	6423	5	FSM	ENSG00000065621.15	ENST00000369707.2	6423	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	21.9829479369806	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATACTCAGAATCTCGCTA	104274968	True	NA	23	True	AATAAA	-23	NA	104275161	104304945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104275335_104277893_104278117_104279369_104279472_104297577_104297685_104299127
transcript_19932.nic	chr10	+	815	4	ISM	ENSG00000065621.15	ENST00000450629.6	1391	6	6268	-1	-21	0	3prime_fragment	FALSE	canonical	3	16	junction_2	56.5822901229312	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGATAATCATTTGT	104274947	True	NA	18	True	AATAAA	-19	NA	104275140	104299418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_104275335_104277893_104278117_104297577_104297685_104299127
transcript_19938.known	chr10	+	669	4	FSM	ENSG00000065621.15	ENST00000473401.5	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	55.4637018438386	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTCTTCTGATAATCAT	104274384	True	NA	14	True	AATAAA	-15	NA	104274897	104299414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_104274950_104277893_104278117_104297577_104297685_104299127
transcript_19939.known	chr10	-	3981	2	FSM	ENSG00000148841.17	ENST00000358187.2	3981	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAGTAGAAATGGTCAC	-104328877	False	1631	-16	True	ATTAAA	-18	NA	104328924	104312143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_104316065_104328864
transcript_19940.known	chr10	-	795	2	FSM	ENSG00000231233.2	ENST00000435434.2	1134	2	49	290	49	-290	multi-exon	FALSE	canonical	3	9	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAAACAATCCATTCTTT	-104353431	True	NA	NA	False	NA	NA	NA	104353575	104351590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_104351928_104353117
transcript_19941.nnic	chr10	-	1020	2	NNC	ENSG00000231233.2	novel	1134	2	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCAGTGACATCTCATT	-104353471	True	NA	0	True	AATAAA	-19	NA	104353615	104351300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_104351928_104353222
transcript_19946.known	chr10	-	2497	21	FSM	ENSG00000108039.18	ENST00000502935.6	2497	21	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_13	34.8519726844837	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920396	True	NA	-6	True	AATAAA	-16	NA	109923511	109864765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_19952.nic	chr10	-	2525	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	-75	0	combination_of_known_junctions	FALSE	canonical	2	22	junction_19	69.1560121509367	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	NA	False	NA	-6	True	AATAAA	-16	NA	109923628	109864765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109923401
transcript_19959.known	chr10	-	2467	20	FSM	ENSG00000108039.18	ENST00000322238.12	2467	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	67.930182505944	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920438	True	NA	-6	True	AATAAA	-16	NA	109923553	109864765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_19960.nnic	chr10	-	2354	20	NIC	ENSG00000108039.18	novel	2497	21	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	70.4461052125111	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920427	True	NA	-6	True	AATAAA	-16	NA	109923542	109864765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_109865313_109868613_109868713_109869952_109870030_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109893011_109893076_109907690_109907816_109915010_109915100_109923401
transcript_19961.known	chr10	-	2344	19	FSM	ENSG00000108039.18	ENST00000369683.5	2344	19	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_17	93.0950828156055	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTTAGCTGTCTCTT	-109920396	True	NA	-6	True	AATAAA	-16	NA	109923511	109864765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_109865313_109868613_109868713_109869952_109870030_109870730_109870905_109871791_109871862_109873366_109873428_109875527_109875600_109877789_109877868_109877999_109878059_109880187_109880239_109880841_109880932_109882431_109882643_109884066_109884149_109886245_109886342_109888048_109888193_109888502_109888596_109891721_109891827_109907690_109907816_109923401
transcript_19972.known	chr10	+	4413	15	FSM	ENSG00000148700.15	ENST00000356080.9	4413	15	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	51.295661590033	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGACTTGTATCATGAGGTT	110003584	True	NA	NA	False	AATAAA	-17	NA	110007983	110135565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110008300_110100624_110100849_110112776_110112916_110116258_110116411_110117341_110117423_110118586_110118737_110119210_110119355_110119465_110119565_110122109_110122293_110124016_110124275_110125825_110125946_110126416_110126504_110130362_110130487_110132304_110132401_110133325
transcript_19982.nic	chr10	+	1388	2	ISM	ENSG00000148700.15	ENST00000487085.5	708	5	-272	11251	-28	944	5prime_fragment	FALSE	canonical	3	422	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTCAACTCAAGTGG	110007573	False	NA	NA	False	NA	NA	NA	110007935	110101648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_110008300_110100624
transcript_19987.known	chr10	+	782	6	FSM	ENSG00000119950.21	ENST00000460667.5	782	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	47.7660967632902	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCATCAGTGACATTGATG	110225766	False	NA	NA	False	AATATA	-9	NA	110226034	110284890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110226284_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
transcript_19988.known	chr10	+	2255	6	FSM	ENSG00000119950.21	ENST00000650843.1	2255	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.2231419496547	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGGAAAAAGAAAATAAAGAC	110227004	True	NA	-21	True	NA	NA	NA	110227086	110286596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227119_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19993.known	chr10	+	2237	6	FSM	ENSG00000119950.21	ENST00000652463.1	2237	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGGCAAGGAAAAAGAAAAT	110227200	True	NA	-27	True	NA	NA	NA	110227317	110286590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227338_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19994.known	chr10	+	567	6	FSM	ENSG00000119950.21	ENST00000651557.1	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	55.6035970059492	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTCTCCCATGGAGAAG	110227208	True	NA	NA	False	NA	NA	NA	110227325	110284851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227399_110228188_110228322_110244827_110244874_110279179_110279295_110279913_110280086_110284823
transcript_19995.known	chr10	+	2230	6	FSM	ENSG00000119950.21	ENST00000651811.1	2230	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGCTGGGCAAGGAAAAAG	110226804	False	NA	25	True	NA	NA	NA	110226816	110286585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110226835_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19996.known	chr10	+	2303	6	FSM	ENSG00000119950.21	ENST00000650810.1	2303	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGACAACCATATTTAGC	110227222	True	NA	-8	True	AAAAAG	-5	NA	110227339	110286609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110227407_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_19997.known	chr10	+	2144	6	FSM	ENSG00000119950.21	ENST00000651613.1	2144	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	47.4358514206291	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTAATTACTTAAAAAAAA	110226577	False	NA	-80	True	TTTAAA	-13	NA	110226589	110286480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110226627_110228188_110228322_110244827_110244858_110279179_110279295_110279913_110280086_110284823
transcript_2.known	ERCC-00002	+	1045	1	FSM	ERCC-00002A	DQ459430	1045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00002_+_0_1000
transcript_20.known	ERCC-00044	+	1149	1	FSM	ERCC-00044A	DQ459424	1149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-27	NA	0	1149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00044_+_0_1100
transcript_20008.known	chr10	-	4310	6	FSM	ENSG00000119953.14	ENST00000369603.10	4310	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	21.5925913220252	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGATTCAATAAATATCA	-110296799	True	NA	NA	False	ATTAAA	-28	NA	110304920	110290729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110294288_110295227_110295382_110297566_110297729_110298647_110298791_110303467_110303588_110304747
transcript_20015.known	chr10	-	753	5	FSM	ENSG00000119953.14	ENST00000460483.5	753	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	68.6931583201704	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGTAAATCTTTTTAC	-110296785	True	NA	NA	False	AAAAAG	-4	NA	110304906	110295229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110295382_110297566_110297746_110298647_110298791_110303467_110303588_110304747
transcript_20017.nic	chr10	-	638	4	ISM	ENSG00000119953.14	ENST00000369603.10	4310	6	-43	6840	-25	0	5prime_fragment	FALSE	canonical	3	127	junction_2	16.779617264871	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	-110296842	True	NA	NA	False	NA	NA	NA	110304963	110297569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_110297729_110298647_110298791_110303467_110303588_110304747
transcript_20018.known	chr10	-	803	5	FSM	ENSG00000119953.14	ENST00000674928.1	803	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	77.2572812102523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTAAGTGACTTTGACTT	-110296817	True	NA	NA	False	NA	NA	NA	110304938	110297569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110297729_110298647_110298791_110300546_110300737_110303467_110303588_110304747
transcript_20019.known	chr10	-	209	2	FSM	ENSG00000273143.2	ENST00000607952.1	209	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCACCTCCTGGCTCA	-110496008	False	NA	NA	False	NA	NA	NA	110496204	110475103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110475227_110496118
transcript_20020.known	chr10	+	5522	29	FSM	ENSG00000108055.11	ENST00000361804.5	5522	29	0	0	0	0	multi-exon	FALSE	non_canonical	3	765	junction_19	91.4730569788789	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTAAAAGCCTATATT	110556882	True	NA	NA	False	AATAAA	-23	NA	110567694	110606048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840_110583963_110584182_110584397_110589604_110589709_110589891_110589992_110590411_110590573_110590990_110591133_110593072_110593224_110596397_110596551_110598138_110598291_110599653_110599813_110600438_110600547_110601021_110601131_110601636_110601885_110601965_110602179_110602473_110602666_110602824_110603003_110603183_110603291_110604230
transcript_20027.nic	chr10	+	1229	12	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-31	8263	-31	1930	5prime_fragment	FALSE	canonical	3	868	junction_4	61.7405930198786	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAGAAGAACGAGGAAT	NA	False	NA	19	True	NA	NA	NA	110567652	110583936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383_110583549_110583840
transcript_20029.nic	chr10	+	1028	11	ISM	ENSG00000108055.11	ENST00000691297.1	3012	17	-31	8756	-31	1437	5prime_fragment	FALSE	canonical	3	868	junction_4	61.5025202735628	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGCTTAGTGCTGAAAG	NA	False	NA	39	True	AAGAAA	-3	NA	110567652	110583443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_110567832_110568937_110569014_110573706_110573746_110575335_110575404_110577420_110577493_110577834_110577915_110578627_110578707_110580903_110581022_110581922_110582099_110582561_110582643_110583383
transcript_20038.known	chr10	+	3481	12	FSM	ENSG00000150593.18	ENST00000280154.12	3481	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	17.5983658144398	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGTTGTATTTAATC	110868253	True	NA	NA	False	AATAAA	-20	NA	110871927	110900006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110872019_110875965_110876071_110881232_110881536_110883002_110883098_110885252_110885367_110887664_110887887_110889532_110889631_110890555_110890671_110894090_110894199_110894411_110894523_110895947_110896088_110898027
transcript_20047.known	chr10	-	616	5	FSM	ENSG00000214413.9	ENST00000398289.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	42.9090608147044	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACAAAAATATCCAAGATT	-110917994	True	NA	-24	True	AATAAA	-20	NA	110919182	110900237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901025_110901123_110901537_110901613_110918120_110918214_110919120
transcript_20048.known	chr10	-	812	5	FSM	ENSG00000214413.9	ENST00000454061.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	44.5224662389675	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTGCAAATTAAATTAT	-110918013	True	NA	-32	True	NA	NA	NA	110919201	110900120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110918120_110918214_110919120
transcript_20052.known	chr10	-	569	4	FSM	ENSG00000214413.9	ENST00000605742.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	42.026446699932	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAATTTGTATTGTGAA	-110918896	False	1188	-4	True	AATAAA	-40	NA	110918936	110900217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110918844
transcript_20053.known	chr10	-	2025	4	FSM	ENSG00000214413.9	ENST00000448814.7	2025	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTTTATTTTGGTGTAC	-110917992	True	NA	-8	True	AATAAA	-18	NA	110919180	110898729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110918120_110918214_110919120
transcript_20060.known	chr10	-	1841	4	FSM	ENSG00000214413.9	ENST00000651952.1	1841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	43.0219582177391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCTCTAGGTCAGATAACAA	-110917988	True	NA	NA	False	NA	NA	NA	110919176	110898973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110907679_110907837_110919120
transcript_20064.known	chr10	-	492	3	FSM	ENSG00000214413.9	ENST00000423273.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	48.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAACTATGAACCAAGTT	-110917969	True	NA	49	True	CATAAA	-3	NA	110919157	110900164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110918120_110918214_110919120
transcript_20065.known	chr10	-	727	3	FSM	ENSG00000214413.9	ENST00000447005.5	727	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	45.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGCATAAAGTGTTTGT	-110918013	True	NA	-66	True	ATTAAA	-24	NA	110919201	110899955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901613_110919120
transcript_20073.known	chr10	-	778	2	FSM	ENSG00000203497.3	ENST00000420367.2	925	2	20	127	20	-127	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGC	-110872205	False	NA	NA	False	NA	NA	NA	110872233	110869867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110870439_110872026
transcript_20074.known	chr10	-	296	2	FSM	ENSG00000214413.9	ENST00000431847.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCTGTATCTGATTCT	-110917973	True	NA	NA	False	NA	NA	NA	110919161	110917958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110918214_110919120
transcript_20075.known	chr10	-	383	3	FSM	ENSG00000214413.9	ENST00000436562.1	383	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCCAAGATTGATGAAATT	-110917969	True	NA	-15	True	AATAAA	-29	NA	110919157	110900228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_110900527_110901537_110901586_110919120
transcript_20076.known	chr10	+	3884	9	FSM	ENSG00000108061.13	ENST00000369452.9	3884	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	18.9039513065391	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCTTGTGTGTTTGTGTGG	110915649	True	NA	14	True	TATAAA	-29	NA	110919603	111013665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110964124_110965062_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_20077.nnic	chr10	+	2982	8	FSM	ENSG00000108061.13	ENST00000689997.1	3581	8	-7	606	-7	-1	multi-exon	TRUE	canonical	3	18	junction_1	54.3413248995342	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTTGTGTGTTTGTGTG	110915613	True	NA	13	True	TATAAA	-28	NA	110919567	111013664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110985627_110985766_111000414_111000546_111004605_111004795_111007530_111007654_111009247_111009386_111009712_111009831_111011609
transcript_20079.nic	chr10	+	356	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-37	5809	-12	-344	multi-exon	FALSE	canonical	3	134	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCTAAAGAAAAAGATCC	110915608	True	NA	NA	False	AAGAAA	-3	NA	110919562	110964385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110964124
transcript_20080.nic	chr10	+	452	2	FSM	ENSG00000108061.13	ENST00000691151.1	6128	2	-37	5713	-12	-248	multi-exon	FALSE	canonical	3	134	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACCTAAGACCAAAGGGAA	110915608	True	NA	NA	False	AAGAAA	-3	NA	110919562	110964481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_110919658_110964124
transcript_20083.nnic	chr10	+	1159	8	NNC	ENSG00000151532.14	novel	4174	8	NA	NA	25	14817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	22.9266799397825	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTGCCAGGGTTT	112446869	True	NA	NA	False	AATAAA	-15	NA	112447023	112752601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112752352
transcript_20084.known	chr10	+	4174	8	FSM	ENSG00000151532.14	ENST00000393077.3	4174	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_7	12.437599348388	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTGTTTATCGCTTTTT	112445063	True	NA	15	True	ATTAAA	-18	NA	112447214	112818744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112447468_112460523_112460583_112464546_112464658_112527086_112527165_112538245_112538331_112668217_112668289_112668936_112668999_112815289
transcript_20096.nnic	chr10	+	1450	3	NNC	ENSG00000151532.14	novel	2423	3	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	112445063	True	NA	8	True	AATAAA	-18	NA	112447214	112450726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_112447468_112448881_112449508_112450155
transcript_20098.known	chr10	+	2423	3	FSM	ENSG00000151532.14	ENST00000483122.1	2423	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTGAATCTTAACTAAT	112446843	True	NA	8	True	AATAAA	-18	NA	112446997	112450726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112447468_112448381_112448490_112448881
transcript_20104.known	chr10	-	2145	11	FSM	ENSG00000023041.12	ENST00000683895.1	2145	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_10	71.3164777593509	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443526	True	NA	-18	True	AATAAA	-18	NA	112446956	112430304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446766
transcript_20119.known	chr10	-	2121	11	FSM	ENSG00000023041.12	ENST00000684173.1	2121	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	75.9276629430934	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443532	True	NA	-18	True	AATAAA	-18	NA	112446962	112430304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442260_112443514_112443607_112445169_112445651_112446704
transcript_20120.known	chr10	-	2038	10	FSM	ENSG00000023041.12	ENST00000682195.1	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	79.4215196138791	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443519	True	NA	-18	True	AATAAA	-18	NA	112446949	112430304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_20121.known	chr10	-	1721	11	FSM	ENSG00000023041.12	ENST00000369404.3	1721	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	70.1541873304794	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACTCTGGTTAAGATGT	-112443471	True	NA	-5	True	ACTAAA	-15	NA	112446901	112430723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443595_112445169_112445651_112446704
transcript_20122.known	chr10	-	3216	10	FSM	ENSG00000023041.12	ENST00000682182.1	3216	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_8	36.5557244170365	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443520	True	NA	-18	True	AATAAA	-18	NA	112446950	112430304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112434465_112438335_112438390_112440533_112440696_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_20123.known	chr10	-	2297	12	FSM	ENSG00000023041.12	ENST00000682055.1	2297	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	94.0339309254338	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATCAGTTTTTACTTAA	-112443532	True	NA	-18	True	AATAAA	-18	NA	112446962	112430304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_112430908_112432239_112432287_112432375_112432522_112433239_112433282_112434296_112434465_112438335_112438390_112440533_112440696_112441728_112441813_112442191_112442352_112443514_112443607_112445169_112445651_112446704
transcript_20124.known	chr10	+	4073	15	FSM	ENSG00000148737.17	ENST00000355995.8	4073	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	57.7033670718492	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938856	True	NA	13	True	AATAAA	-25	NA	112950249	113167678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_112964555_112964625_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_20125.known	chr10	+	3802	14	FSM	ENSG00000148737.17	ENST00000369397.8	3802	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	52.3273718636226	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112950438	False	NA	13	True	AATAAA	-25	NA	112950451	113167678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113158666_113158718_113159919_113159993_113165554
transcript_20128.known	chr10	+	1979	13	FSM	ENSG00000148737.17	ENST00000355717.9	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	53.1310617456702	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCGTCGTGAACCCCG	112950572	False	NA	NA	False	NA	NA	NA	112950585	113165972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113089399_113089541_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_2013.nic	chr1	+	1400	9	NIC	ENSG00000116691.11	novel	1541	10	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	110	junction_1	171.668239272732	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCCCACGTGTGCT	12010869	True	NA	25	True	AATAAA	-16	NA	12019436	12032039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_12019553_12022094_12022443_12022832_12022918_12029032_12029142_12029222_12029282_12029764_12029895_12030027_12030125_12031265_12031404_12031721
transcript_20130.known	chr10	+	3953	13	FSM	ENSG00000148737.17	ENST00000536810.5	3953	13	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_12	45.4039737614819	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTCACTTGTTTCTGT	112938856	True	NA	13	True	AATAAA	-25	NA	112950249	113167678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113159919_113159993_113165554
transcript_20132.nic	chr10	+	2556	12	NIC	ENSG00000148737.17	novel	3953	13	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_11	28.093409715118	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAAAAAAAAGCAAT	112938811	True	NA	NA	False	ATTAAA	-5	NA	112950204	113166309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_112950946_112951206_112951274_112951482_112951608_113040024_113040127_113141183_113141317_113143922_113144026_113146010_113146098_113150997_113151124_113151724_113151885_113152332_113152441_113158020_113158070_113165554
transcript_20137.known	chr10	+	2467	7	FSM	ENSG00000165806.21	ENST00000621345.4	2467	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	8.19891591749923	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	113679052	True	NA	17	True	ATTAAA	-25	NA	113679161	113730907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679350_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_20139.known	chr10	+	2620	7	FSM	ENSG00000165806.21	ENST00000369321.6	2620	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.68962790249909	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCAGTTTGCTTTCCTTT	113679658	False	NA	17	True	ATTAAA	-25	NA	113679668	113730907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679979_113697493_113697604_113721000_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_20141.known	chr10	+	2344	7	FSM	ENSG00000165806.21	ENST00000369318.8	2344	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.02305952453618	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTCCAGTTTGCTTTCCT	113679636	True	NA	15	True	ATTAAA	-23	NA	113679911	113730905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679979_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_20142.known	chr10	+	2421	8	FSM	ENSG00000165806.21	ENST00000369315.5	2421	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.255837487767	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGTCCAGTTTGCTTTC	113679664	False	NA	13	True	ATTAAA	-21	NA	113679939	113730903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_113679979_113691963_113692071_113697493_113697604_113721031_113721169_113721650_113721780_113725361_113725538_113726304_113726435_113729310
transcript_20143.known	chr10	-	4241	10	FSM	ENSG00000198924.8	ENST00000369305.1	4241	10	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_9	16.6095316974885	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTCTGGTGTCTTTTGT	-113854072	True	NA	NA	False	AATAAA	-13	NA	113854383	113834728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_113835313_113837061_113837204_113841405_113841561_113842342_113842489_113844103_113844245_113845684_113845804_113847201_113847336_113848979_113850645_113852722_113853848_113854353
transcript_20146.known	chr10	-	7343	17	FSM	ENSG00000165813.20	ENST00000648613.1	7343	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	14.7604570982744	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTGTACTTATTAAATA	-114171271	True	NA	-44	True	TATAAA	-29	NA	114174232	114120900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114173140_114173266_114174014
transcript_20148.known	chr10	-	2035	3	FSM	ENSG00000165813.20	ENST00000369285.7	2035	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	2.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-114171241	True	NA	-5	True	AATAAA	-22	NA	114174202	114161607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114163330_114173140_114173266_114174014
transcript_20149.known	chr10	-	1928	2	FSM	ENSG00000165813.20	ENST00000369286.1	1928	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCAGTGCTGCTGCTATT	-114171259	True	NA	-5	True	AATAAA	-22	NA	114174220	114161607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114163330_114174014
transcript_20150.known	chr10	-	7228	16	FSM	ENSG00000165813.20	ENST00000369287.8	7228	16	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_13	10.1971673626661	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTAGTTTGATGGCATCT	-114171242	True	NA	-5	True	ATTAAA	-22	NA	114174203	114120861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114125227_114125885_114126106_114127460_114127672_114129890_114129972_114131146_114131337_114131928_114132185_114134912_114135056_114135890_114135978_114136147_114136247_114137185_114137291_114144496_114144617_114145548_114145762_114151091_114151221_114157553_114157681_114162636_114163330_114174014
transcript_20159.known	chr10	-	854	8	FSM	ENSG00000099204.21	ENST00000428430.1	854	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_7	70.3205488590407	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCATCTACAAACAGCAT	-114519351	True	NA	NA	False	NA	NA	NA	114526918	114451644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_114451672_114465697_114465828_114468180_114468217_114472976_114473133_114473878_114473957_114487957_114488017_114491790_114491879_114526638
transcript_20161.known	chr10	+	3406	8	FSM	ENSG00000165832.6	ENST00000298746.5	3406	8	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_7	21.2861936667016	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCATGAGTTATTT	114934188	True	NA	11	True	AATAAA	-20	NA	114938194	114977676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725_114959808_114970367_114970441_114972134_114972275_114974328_114974386_114975122
transcript_20166.known	chr10	+	584	4	FSM	ENSG00000165832.6	ENST00000485065.1	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_2	16.739839372653	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGCCTCTTTTTCTATA	114934379	False	NA	-1	True	AATAAA	-10	NA	114938385	114960000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_114938540_114942644_114942744_114951093_114951150_114959725
transcript_20169.nic	chr10	+	1353	8	NIC	ENSG00000107518.18	novel	1701	10	NA	NA	45	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	33.0960260269343	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAAATGGTGAGTTATTT	115092029	True	NA	17	True	AATAAA	-18	NA	115093415	115171369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_115093637_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036
transcript_20170.known	chr10	+	1818	8	FSM	ENSG00000107518.18	ENST00000609571.5	1818	8	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	7.54848275064166	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAGTTATTTGAGATTG	115091978	True	NA	24	True	AATAAA	-25	NA	115093364	115171376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_115094044_115120184_115120269_115121698_115121813_115127592_115127722_115129326_115129536_115160039_115160215_115165557_115165646_115171036
transcript_20171.known	chr10	-	1755	10	FSM	ENSG00000151892.16	ENST00000684105.1	1755	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	5.49747416749021	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTTATCTGTTTCCTGT	-116272624	False	NA	NA	False	ATTAAA	-34	NA	116272643	116064354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116064545_116065572_116065627_116089740_116089923_116093701_116093837_116096654_116096765_116125220_116125558_116269502_116269587_116270821_116271116_116271989_116272276_116272560
transcript_20172.known	chr10	+	1679	9	FSM	ENSG00000182645.6	ENST00000333254.4	1679	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	14.9331845230681	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116324414	True	NA	24	True	ATTAAA	-21	NA	116324447	116380029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_116324614_116324946_116325091_116325302_116325389_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_20177.nnic	chr10	+	1430	7	NNC	ENSG00000182645.6	novel	313	2	NA	NA	448	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	14.6363322667334	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116325441	False	NA	24	True	ATTAAA	-21	NA	116325455	116380029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_116325603_116340733_116340851_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_20181.nnic	chr10	+	1309	6	NNC	ENSG00000182645.6	novel	1679	9	NA	NA	452	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.11055553385247	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	116324945	True	NA	24	True	ATTAAA	-21	NA	116325459	116380029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_116325603_116342035_116342202_116357379_116357482_116357835_116357939_116378422_116378511_116379322
transcript_20182.nic	chr10	+	766	5	ISM	ENSG00000182645.6	ENST00000333254.4	1679	9	-55	37796	-55	0	5prime_fragment	FALSE	canonical	2	3	junction_1	20.8026440627147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGAAAATAACTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	116324392	116342233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_116324614_116324946_116325091_116325302_116325389_116340733_116340851_116342035
transcript_20185.nic	chr10	+	815	4	ISM	ENSG00000182645.6	ENST00000333254.4	1679	9	229	37796	229	0	internal_fragment	FALSE	canonical	2	7	junction_1	21.3541565040626	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGAAAATAACTTATTT	116324643	False	NA	NA	False	AATAAA	-22	NA	116324676	116342233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_116325091_116325302_116325389_116340733_116340851_116342035
transcript_20187.nnic	chr10	+	462	3	NNC	ENSG00000182645.6	novel	313	2	NA	NA	448	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	11	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGAAAATAACTTATTT	116325441	False	NA	NA	False	AATAAA	-22	NA	116325455	116342233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_116325603_116340733_116340851_116342035
transcript_20190.known	chr10	+	313	2	FSM	ENSG00000182645.6	ENST00000463594.1	313	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATGAAAATAACTTATTT	NA	False	NA	NA	False	AATAAA	-22	NA	116340735	116342233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_116340851_116342035
transcript_20192.known	chr10	-	4894	4	FSM	ENSG00000165868.16	ENST00000453491.3	4894	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTTTGTGTGTCCTT	-116849391	True	NA	-3	True	CATAAA	-43	NA	116849701	116828763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116833374_116834934_116835023_116835197_116835258_116849565
transcript_20194.known	chr10	-	525	3	FSM	ENSG00000165868.16	ENST00000674326.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAATGTTTGTTTTATGAAA	-116849410	True	NA	NA	False	AAAAAG	-14	NA	116849720	116833091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116833374_116834934_116835023_116849565
transcript_20195.known	chr10	-	541	3	FSM	ENSG00000165868.16	ENST00000434227.2	541	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCAATCCTTAGGTGAC	-116850226	True	NA	NA	False	AAAAAG	-39	NA	116850236	116833066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116833374_116834934_116835023_116850090
transcript_20197.known	chr10	-	734	2	FSM	ENSG00000165868.16	ENST00000674400.1	734	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATGAGTACACCAACCT	-116849360	True	NA	NA	False	NA	NA	NA	116849670	116847594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116848224_116849565
transcript_20198.nnic	chr10	-	1461	7	NNC	ENSG00000165863.17	novel	966	6	NA	NA	-52	1485	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	27.2274371422162	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTCTTTTTAATATTTT	-116668164	True	NA	-26	True	AATAAA	-20	NA	116670316	116662210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_116662698_116663883_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_20200.nic	chr10	-	1162	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116668164	True	NA	-4	True	AATAAA	-18	NA	116670316	116663695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_20201.nic	chr10	-	1072	6	NIC	ENSG00000165863.17	novel	966	6	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_3	18.9589029218465	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	-116668164	True	NA	-1	True	AATAAA	-31	NA	116670316	116663785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116670080
transcript_20204.nic	chr10	-	1732	5	NIC	ENSG00000165863.17	novel	1529	5	NA	NA	-52	0	intron_retention	FALSE	canonical	3	37	junction_2	16.6789538041209	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTGCATCCTGAGTGGTT	-116668164	True	NA	-1	True	AATAAA	-31	NA	116670316	116663785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_116664052_116664173_116664272_116664760_116665827_116668257_116668324_116670080
transcript_20206.known	chr10	+	827	3	FSM	ENSG00000232767.2	ENST00000433600.2	827	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTGTAGAATATGG	116670050	False	NA	17	True	CATAAA	-29	NA	116670064	116672750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_116670279_116670418_116670486_116672204
transcript_20207.known	chr10	-	1791	3	FSM	ENSG00000165863.17	ENST00000588224.1	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCTTGTTTTAGAATATA	-116668112	True	NA	60	True	AATAAA	-23	NA	116670264	116664285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116665827_116668257_116668324_116670080
transcript_20208.nic	chr10	+	1090	2	NIC	ENSG00000232767.2	novel	827	3	NA	NA	-92	0	intron_retention	FALSE	canonical	3	10	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTATTTGTAGAATATGG	116669927	True	NA	17	True	CATAAA	-29	NA	116669941	116672750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_116670486_116672204
transcript_20209.known	chr10	-	966	6	FSM	ENSG00000165863.17	ENST00000588184.2	966	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	27.0451474390509	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAAAGTTTCTTGTGCGG	-116667814	False	NA	-4	True	AATAAA	-18	NA	116669966	116663695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116664052_116664173_116664272_116664760_116664948_116665607_116665827_116668257_116668324_116669926
transcript_20210.known	chr10	-	6871	17	FSM	ENSG00000187164.20	ENST00000355371.9	6871	17	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_10	10.9457112034806	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGCCAGTTTTTATATAC	-117003706	True	NA	2	True	AATAAA	-19	NA	117005187	116881476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_116886567_116901764_116901958_116906626_116906748_116911789_116911844_116915374_116915485_116921433_116921517_116927791_116927892_116929848_116930003_116940465_116940613_116944923_116945019_116948915_116948998_116951908_116952007_116954041_116954211_116960135_116960231_116968651_116968713_116979255_116979309_117005021
transcript_20213.nic	chr10	+	1094	6	ISM	ENSG00000188316.15	ENST00000341276.11	2878	14	-23	21344	-23	-21270	5prime_fragment	FALSE	canonical	0	0	junction_4	1.89736659610103	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTCATTGATGAACTTT	NA	False	NA	NA	False	AATATA	-17	NA	116849475	116861257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_116849732_116855622_116855752_116856491_116856683_116858989_116859139_116860793_116860964_116861058
transcript_20215.nnic	chr10	+	942	5	NIC	ENSG00000188316.15	novel	2878	14	NA	NA	0	-21270	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTCATTGATGAACTTT	116849424	True	NA	NA	False	AATATA	-17	NA	116849498	116861257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_116849732_116856491_116856683_116858989_116859139_116860793_116860964_116861058
transcript_20218.known	chr10	+	3831	16	FSM	ENSG00000165646.14	ENST00000644641.2	3831	16	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_8	10.2493360218547	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGCCTGTTTGTATTC	117239838	True	NA	11	True	AATAAA	-15	NA	117241113	117279430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_117241221_117241678_117241815_117243970_117244314_117253398_117253458_117254047_117254132_117254404_117254498_117255276_117255367_117255478_117255523_117255596_117255658_117257796_117257893_117266732_117266812_117266983_117267036_117267672_117267737_117270070_117270191_117270329_117270464_117277161
transcript_20220.known	chr10	+	3270	5	FSM	ENSG00000177640.16	ENST00000435944.5	3270	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.3166247903554	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGTATTTGACTGTTAGT	118046813	False	NA	NA	False	AATAAA	-25	NA	118046823	118210153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118206521_118206622_118207435
transcript_20221.known	chr10	+	5817	4	FSM	ENSG00000177640.16	ENST00000454781.6	5817	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.2659863237109	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGAGTCCTTGTTTCA	118046908	True	NA	NA	False	AATAAA	-7	NA	118046981	118103718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118098195
transcript_20222.known	chr10	+	3931	4	FSM	ENSG00000177640.16	ENST00000454857.6	3931	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.2659863237109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGACTGTTAGTTCATT	118046908	True	NA	NA	False	AATAAA	-30	NA	118046981	118210158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118047104_118049511_118049618_118052130_118052197_118206521
transcript_20223.known	chr10	+	568	4	FSM	ENSG00000238276.7	ENST00000436975.7	583	4	11	4	5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGTCTGTGGTGTTTTGT	NA	False	NA	NA	False	AATAAA	-19	NA	118241481	118247874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118241683_118241782_118241887_118245347_118245435_118247698
transcript_20230.known	chr10	-	1000	9	FSM	ENSG00000165669.14	ENST00000470476.5	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	136.923735615853	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTCAGTCTTTCTTT	-118337956	True	NA	1	True	CATAAA	-21	NA	118342315	118310719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118310909_118311206_118311314_118322304_118322412_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_20231.known	chr10	-	13898	9	FSM	ENSG00000165669.14	ENST00000369183.9	13898	9	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_8	50.0010937380374	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATAATTATTACTTTATTG	-118337965	True	NA	NA	False	AATAAA	-21	NA	118342324	118297924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726_118341928_118342269
transcript_20235.known	chr10	-	872	8	FSM	ENSG00000165669.14	ENST00000369172.8	872	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	91.9145565962526	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAAATTTGGGATTTTGA	-118337961	True	NA	-25	True	ACTAAA	-12	NA	118342320	118310745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118310909_118311206_118311314_118326153_118326244_118335113_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118342269
transcript_20243.known	chr10	+	1096	4	FSM	ENSG00000232139.6	ENST00000664512.1	1096	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTGTTGTCACTGGATA	NA	False	NA	NA	False	AATATA	-24	NA	118341436	118359443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_118341957_118357526_118357579_118357771_118357849_118358996
transcript_20247.known	chr10	-	659	3	FSM	ENSG00000165669.14	ENST00000487269.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	8.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATACTTGCGTTTATTTTG	-118337969	True	NA	NA	False	NA	NA	NA	118342328	118336024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118336424_118341726_118341928_118342269
transcript_20250.known	chr10	-	975	5	FSM	ENSG00000165669.14	ENST00000369170.4	975	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	31.5465925259766	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATATCTTTGTTATTGCA	-118337881	False	NA	NA	False	AAAAAG	-9	NA	118342240	118335113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118335214_118335395_118335427_118335553_118335642_118336181_118336424_118341726
transcript_20252.known	chr10	-	11035	9	FSM	ENSG00000151893.15	ENST00000369151.8	11035	9	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_2	11.5298525576002	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTTGTTTTTGCTGAAT	-118748041	True	NA	-2	True	AATAAA	-22	NA	118754970	118676410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118686169_118686597_118686642_118691264_118691404_118695140_118695231_118701305_118701409_118707491_118707588_118729294_118729398_118730283_118730411_118754395
transcript_20255.known	chr10	-	549	1	FSM	ENSG00000236058.3	ENST00000420302.1	549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	332	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAATTCAGCATTAAAAT	NA	False	NA	NA	False	AAAAAG	-44	NA	118872602	118872053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_118872100_118872600
transcript_20257.nic	chr10	-	2638	16	ISM	ENSG00000107581.13	ENST00000541549.2	4495	23	-61	14771	-61	6312	5prime_fragment	FALSE	canonical	3	613	junction_12	46.9281247109757	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGGAGGAGCAGAGAAG	-119067771	True	NA	12	True	NA	NA	NA	119080884	119050563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_20262.known	chr10	-	6659	22	FSM	ENSG00000107581.13	ENST00000369144.8	6659	22	0	0	0	0	multi-exon	FALSE	canonical	3	613	junction_18	157.042449884608	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTTCTCATCAAAGCTAA	-119067704	True	NA	-9	True	AATAAA	-18	NA	119080817	119033669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_20263.known	chr10	-	4495	23	FSM	ENSG00000107581.13	ENST00000541549.2	4495	23	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	223.008875782301	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAGAAAAACTAAAA	-119067710	True	NA	NA	False	NA	NA	NA	119080823	119035792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119035984_119036030_119036269_119037118_119037310_119038237_119038440_119041993_119042773_119044053_119044143_119049800_119049986_119050520_119050675_119051198_119051322_119056739_119056854_119056935_119057041_119057955_119058304_119059211_119059398_119059601_119059719_119060745_119060845_119061223_119061329_119065398_119065571_119069445_119069655_119070885_119071086_119072889_119073054_119073440_119073578_119073746_119073938_119080627
transcript_20293.known	chr10	+	2441	9	FSM	ENSG00000119979.18	ENST00000361432.3	2441	9	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	59.9998697915254	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	119098491	True	NA	26	True	AATAAA	-23	NA	119104112	119137984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119104198_119107967_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_20313.nic	chr10	+	1704	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-12	8	intron_retention	TRUE	canonical	3	139	junction_1	82.6089243060337	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAAGGTTTTTCCCGGC	119098452	True	NA	NA	False	NA	NA	NA	119104073	119137188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_20315.nic	chr10	+	2227	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-12	-115	intron_retention	FALSE	canonical	3	139	junction_1	82.6089243060337	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTGGGTCTTTCATCTTT	119098452	True	NA	-52	True	AAAACA	-1	NA	119104073	119137711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_20318.nic	chr10	+	2500	9	NIC	ENSG00000119979.18	novel	2441	9	NA	NA	-12	0	intron_retention	FALSE	canonical	3	139	junction_1	82.6089243060337	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTTTAGGTGGGTGACG	119098452	True	NA	26	True	AATAAA	-23	NA	119104073	119137984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514_119129623_119132514_119132610_119136470
transcript_20395.known	chr10	+	992	2	FSM	ENSG00000119979.18	ENST00000472379.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATATTTTGAACTCAGCAG	119098464	True	NA	NA	False	AATAAA	-15	NA	119104085	119105643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119104198_119104763
transcript_20396.known	chr10	+	851	7	FSM	ENSG00000119979.18	ENST00000487888.5	851	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	95.0498407269693	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCAAAAGGTTTGTTCTC	119098482	True	NA	NA	False	NA	NA	NA	119104103	119129612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119104198_119107947_119108165_119111848_119111929_119117518_119117668_119120340_119120453_119123468_119123570_119129514
transcript_20404.known	chr10	-	1556	14	FSM	ENSG00000183605.17	ENST00000355697.7	1556	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_11	32.6284444099835	561	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACCTTTGCCGCCCTC	-119163456	True	NA	NA	False	NA	NA	NA	119165714	119140766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119141320_119146235_119146354_119147774_119147861_119155061_119155178_119156677_119156757_119157667_119157734_119157870_119157928_119158008_119158063_119159727_119159754_119160914_119160970_119161054_119161082_119162339_119162415_119164130_119164197_119165536
transcript_2042.nic	chr1	-	1404	6	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	163.875562546708	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12616793	False	NA	-12	True	AATAAA	-19	NA	12616819	12567909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12616559
transcript_20422.known	chr10	-	1553	7	FSM	ENSG00000165672.7	ENST00000298510.4	1553	7	0	0	0	0	multi-exon	FALSE	canonical	3	4576	junction_6	251.973157741499	19697	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATTTTACCACCAGTA	-119152168	True	NA	-22	True	AATAAA	-15	NA	119178812	119167719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119168534_119169176_119169343_119172381_119172486_119173736_119173873_119174450_119174593_119177020_119177154_119178754
transcript_20425.known	chr10	-	923	5	FSM	ENSG00000148908.15	ENST00000369103.3	923	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	7.90569415042095	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATCACACTACCTTTTAC	-119539452	True	NA	-24	True	ATTAAA	-26	NA	119542719	119499816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305_119527425_119542589
transcript_2043.known	chr1	-	2201	6	FSM	ENSG00000162496.9	ENST00000616661.5	2201	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	22.4321198284959	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12617224	True	NA	-12	True	AATAAA	-19	NA	12618210	12567909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_12568425_12572727_12572854_12578717_12578957_12579292_12579413_12580522_12580667_12617153
transcript_20439.known	chr10	-	738	4	FSM	ENSG00000148908.15	ENST00000369101.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	6.23609564462324	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATAACTTGGAAGTTT	NA	False	NA	-53	True	AGTAAA	-36	NA	119527477	119499924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119500260_119515508_119515653_119526031_119526119_119527305
transcript_20450.known	chr10	-	2321	13	FSM	ENSG00000151923.18	ENST00000497671.5	2321	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	81.1799698201471	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGACTACAAATTTTGAT	-119589867	True	NA	-33	True	AATAAA	-15	NA	119597029	119575411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119580470_119580847_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_20462.known	chr10	-	3827	12	FSM	ENSG00000151923.18	ENST00000436547.7	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_7	60.8408029679517	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGACTGAAGTGTCCTT	-119589802	True	NA	16	True	AATAAA	-33	NA	119596964	119573464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_20463.known	chr10	-	5072	12	FSM	ENSG00000151923.18	ENST00000369093.6	5072	12	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	71.6710806507959	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTTTTTCTTATTGTCG	-119596472	False	65	-4	True	AATAAA	-19	NA	119596495	119571801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119576751_119577079_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582609_119588151_119588249_119596433
transcript_2047.nic	chr1	-	1608	4	NIC	ENSG00000162496.9	novel	2201	6	NA	NA	234	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	176.198751414418	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTTGTTCAAATCTTC	-12617950	False	NA	-12	True	AATAAA	-19	NA	12617976	12567909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_12568425_12572727_12572854_12580522_12580667_12617153
transcript_20472.known	chr10	-	2222	11	FSM	ENSG00000151923.18	ENST00000489822.5	2222	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_6	63.806269284452	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTGATATAATAGGAAAAA	-119589802	True	NA	-20	True	AATAAA	-28	NA	119596964	119575398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_119575792_119576610_119577204_119577450_119577536_119577640_119577737_119578725_119578835_119579934_119580011_119581921_119582010_119582168_119582224_119582458_119582558_119588151_119588249_119596433
transcript_20483.known	chr10	+	3693	6	FSM	ENSG00000198825.15	ENST00000650409.1	3693	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	42.0123791280618	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGGGTATGAGAATTCC	119804737	True	NA	11	True	AATAAA	-23	NA	119818726	119829147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119819540_119820845_119820918_119822430_119822505_119823070_119823200_119823814_119823903_119826630
transcript_20484.known	chr10	+	874	5	FSM	ENSG00000198825.15	ENST00000369081.3	874	5	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_2	12.5971226873441	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTGAGATTGGTGTGA	119724703	True	NA	5	True	AATAAA	-15	NA	119726161	119792197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119726360_119751075_119751157_119781634_119781772_119791516_119791646_119791868
transcript_20486.known	chr10	+	7148	19	FSM	ENSG00000107651.14	ENST00000369075.8	7148	19	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	24.9782621542595	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTTCTAGTGGTGCTTTT	119887305	True	NA	NA	False	ATTAAA	-16	NA	119892729	119944657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083_119904278_119909040_119909131_119912043_119912165_119914729_119914820_119915747_119915890_119917835_119918045_119918392_119918512_119919443_119919597_119920888_119920985_119926035_119926228_119929606_119929763_119930328_119930432_119932132_119932319_119933004_119933168_119933685_119933788_119940585
transcript_20493.nic	chr10	+	1671	4	ISM	ENSG00000107651.14	ENST00000369075.8	7148	19	-132	39995	-132	0	5prime_fragment	FALSE	canonical	3	313	junction_3	18.0554700852678	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	119887173	True	NA	8	True	AATAAA	-19	NA	119892597	119904662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_119892946_119898426_119898960_119902798_119903010_119904083
transcript_20494.nic	chr10	+	1851	4	NIC	ENSG00000107651.14	novel	7148	19	NA	NA	-129	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	136.521060646334	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGAGTCTTATTAGC	119887176	True	NA	8	True	AATAAA	-19	NA	119892600	119904662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_119892946_119898243_119898960_119902798_119903010_119904083
transcript_20497.known	chr10	+	285	2	FSM	ENSG00000107651.14	ENST00000470478.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAATAAGGAAGTATAATT	119887320	True	NA	NA	False	AAGAAA	-43	NA	119892744	119898327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_119892946_119898243
transcript_20498.nnic	chr10	-	518	2	Genic_Genomic	ENSG00000220842.6	novel	483	1	NA	NA	-45	50	multi-exon	FALSE	canonical	0	0	junction_1	0	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAGAATGAACTTTCA	NA	False	NA	NA	False	AATAAA	-28	NA	120355228	120354650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr10_-_120355055_120355114
transcript_20499.known	chr10	-	483	1	FSM	ENSG00000220842.6	ENST00000495531.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72087	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGGTGTTAAAAAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	120355183	120354700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_120354700_120355200
transcript_205.known	SIRV2	+	424	1	FSM	SIRV2C	SIRV206	424	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15296	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAACACACTTCCATCCAC	NA	False	NA	NA	False	NA	NA	NA	4033	4457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_+_4000_4500
transcript_20500.known	chr10	+	4545	29	FSM	ENSG00000120008.16	ENST00000263461.11	4545	29	0	0	0	0	multi-exon	TRUE	canonical	1	51	junction_28	30.8055123612112	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTTTGTGTTCTCTGCAT	120847039	True	NA	15	True	AATAAA	-17	NA	120851361	120909524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_120851507_120852523_120852636_120858642_120858797_120860108_120860283_120862734_120862922_120865046_120865213_120865629_120865745_120866568_120866765_120867065_120867170_120871169_120871347_120873838_120873924_120878352_120878460_120880825_120880902_120883779_120883889_120885813_120885939_120886688_120886837_120889077_120889185_120889894_120890010_120890715_120890888_120900028_120900138_120901035_120901099_120902256_120902323_120903054_120903233_120904046_120904143_120904645_120904812_120905318_120905417_120905875_120906022_120906775_120906856_120908555
transcript_20502.known	chr10	-	1364	3	FSM	ENSG00000227165.10	ENST00000630905.4	1401	3	0	37	0	-24	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTGTTATGTAAAATAA	NA	False	NA	NA	False	NA	NA	NA	120851457	120762812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_120763676_120776734_120776885_120851106
transcript_20503.known	chr10	-	4369	17	FSM	ENSG00000066468.24	ENST00000613048.4	4369	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	157.235094683089	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTCGTGTCTTACCAAA	-121593405	True	NA	-3	True	AATAAA	-22	NA	121598458	121478333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121480022_121483697_121483804_121485394_121485533_121487353_121487425_121487990_121488114_121496531_121496723_121498494_121498606_121500825_121500948_121503789_121503942_121515116_121515320_121517318_121517464_121519978_121520170_121538591_121538716_121551289_121551460_121564501_121564580_121593708_121593968_121597961
transcript_20507.known	chr10	-	4895	12	FSM	ENSG00000107669.19	ENST00000369043.8	4895	12	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	46.3136985964839	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTCTTGGTGGTCATTA	-121924527	True	NA	-5	True	AATAAA	-17	NA	121928031	121740423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_20508.known	chr10	-	4835	12	FSM	ENSG00000107669.19	ENST00000540606.7	5138	12	293	10	-5	-9	multi-exon	FALSE	canonical	3	18	junction_11	61.6728237563568	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTGTTTCTATCTGCAGT	NA	False	NA	-23	True	GATAAA	-19	NA	121928492	121740441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121928346
transcript_2051.nnic	chr1	+	450	2	FSM	ENSG00000288927.1	ENST00000688638.1	491	2	-44	85	-18	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGGAGCATATTTATTGC	12618356	False	NA	NA	False	AATAAA	-16	NA	12618370	12618902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_12618596_12618677
transcript_20515.known	chr10	-	4550	11	FSM	ENSG00000107669.19	ENST00000369040.9	4801	11	96	155	-15	-41	multi-exon	FALSE	canonical	3	16	junction_5	62.6709661645646	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTAGAAGTTATTCAAGT	-121924475	True	NA	NA	False	AATGAA	-24	NA	121927979	121740587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121743859_121790168_121790290_121836717_121836818_121841081_121841264_121870005_121870039_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_20517.nnic	chr10	-	1123	8	NNC	ENSG00000107669.19	novel	2161	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	80.0792974341747	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGAAGCCCCTGCTT	-121924517	True	NA	-6	True	AATAAA	-27	NA	121928021	121888995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_121889105_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_20519.nnic	chr10	-	1175	8	NNC	ENSG00000107669.19	novel	2161	8	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	78.2134703153844	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCAGAAGCCCCTGCTT	-121924517	True	NA	-6	True	AATAAA	-27	NA	121928021	121888995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_121889157_121898840_121898970_121902390_121902621_121910905_121911152_121913789_121913894_121922348_121922412_121924265_121924330_121927843
transcript_20525.nic	chr10	-	1559	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_10	216.519952891183	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974794	False	NA	NA	False	ATTAAA	-26	NA	121974817	121957090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974305
transcript_20526.nic	chr10	-	1476	11	NIC	ENSG00000107672.15	novel	1391	11	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_10	217.11215995425	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121974795	False	NA	NA	False	ATTAAA	-26	NA	121974818	121957090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974389
transcript_20528.known	chr10	-	1391	11	FSM	ENSG00000107672.15	ENST00000369023.8	1391	11	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_5	37.6143589603758	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTGTAGTTGCTCTTTAT	-121965905	True	NA	NA	False	ATTAAA	-26	NA	121975217	121957090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121957260_121959323_121959411_121959500_121959596_121960357_121960407_121961422_121961518_121963237_121963329_121965285_121965386_121967654_121967807_121970938_121971070_121974003_121974082_121974873
transcript_20542.known	chr10	-	819	4	FSM	ENSG00000107672.15	ENST00000472431.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	357.013538492123	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAAAATCCAACAGACC	-121974731	False	9312	NA	False	AATAAA	-30	NA	121974754	121967645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_121967807_121970938_121971070_121974003_121974082_121974305
transcript_2055.known	chr1	+	477	3	FSM	ENSG00000259961.1	ENST00000563570.1	477	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAACAATTTGTTTCCTC	NA	False	NA	NA	False	AATAAA	-24	NA	13513219	13516270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13513342_13514290_13514545_13516169
transcript_20553.known	chr10	+	14010	12	FSM	ENSG00000107679.15	ENST00000368990.8	3741	12	-12	-10257	0	10248	multi-exon	FALSE	canonical	3	111	junction_1	48.3161078833109	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCATGACTCGACTTTG	122370596	True	NA	NA	False	AATAAA	-17	NA	122374695	122442602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122374807_122393180_122393342_122397917_122397975_122400342_122400389_122406575_122406674_122412919_122413046_122415858_122416003_122417899_122417969_122424198_122424264_122424895_122424960_122426941_122427032_122429623
transcript_20556.known	chr10	+	2091	9	FSM	ENSG00000166033.13	ENST00000368984.8	2091	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.77800465330223	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTAGTGCTTATTTT	122460903	True	NA	9	True	ATTAAA	-18	NA	122461552	122514907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122462125_122488901_122489002_122489421_122489627_122506690_122506886_122507369_122507403_122508655_122508771_122510095_122510154_122511969_122512066_122514190
transcript_20557.known	chr10	+	1214	6	FSM	ENSG00000166033.13	ENST00000420892.1	1214	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	4.87442304278158	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGTAGTGCTTATTTT	NA	False	NA	9	True	ATTAAA	-18	NA	122506690	122514907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122506886_122507369_122507403_122508655_122508771_122510095_122510154_122511969_122512066_122514190
transcript_20559.known	chr10	-	1958	9	FSM	ENSG00000138161.14	ENST00000392790.6	1958	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	5.55512151082224	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	-122845725	True	NA	-10	True	AATAAA	-36	NA	122845857	122832157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122841177_122841329_122845761
transcript_20561.known	chr10	-	1976	8	FSM	ENSG00000138161.14	ENST00000368900.5	1976	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	9.512612465478	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	NA	False	NA	-10	True	AATAAA	-36	NA	122846175	122832157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122836900_122837403_122837555_122839016_122839232_122845761
transcript_20562.known	chr10	-	2125	8	FSM	ENSG00000138161.14	ENST00000368901.5	2125	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	7.97188938760212	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTGTGTCGGTGTGTT	NA	False	NA	-10	True	AATAAA	-36	NA	122846175	122832157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122832451_122833671_122833941_122834705_122835098_122836177_122836351_122836830_122837049_122837403_122837555_122839016_122839232_122845761
transcript_20566.nnic	chr10	-	863	5	NNC	ENSG00000213185.7	novel	728	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_4	7.71362431027076	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTTTGCTGCCAATA	-122879238	True	NA	NA	False	AATAAA	-18	NA	122879654	122849095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_122849440_122850423_122850551_122855644_122855787_122858605_122858686_122879484
transcript_20570.known	chr10	-	704	4	FSM	ENSG00000213185.7	ENST00000368896.1	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8193010820572	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTCTTTGCTGCCAATA	-122879189	True	NA	NA	False	AATAAA	-18	NA	122879605	122849095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122849440_122850423_122850521_122855644_122855787_122879484
transcript_20571.known	chr10	-	728	4	FSM	ENSG00000213185.7	ENST00000368898.8	728	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.3387082795139	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGATTGTTGATTA	-122879165	True	NA	NA	False	AATAAA	-36	NA	122879581	122849077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122849440_122850423_122850551_122855644_122855787_122879484
transcript_20572.known	chr10	-	645	3	FSM	ENSG00000213185.7	ENST00000462859.5	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	17.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCTTTGCTGCCAATATT	-122879225	True	NA	NA	False	AATAAA	-20	NA	122879641	122849093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122849440_122855644_122855787_122879484
transcript_20574.known	chr10	+	1650	6	FSM	ENSG00000255624.4	ENST00000425266.3	1751	6	0	101	0	-101	multi-exon	FALSE	canonical	2	3	junction_1	5.49181208709839	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTATTCCTTGTTAGGAT	122879366	True	NA	-85	True	AAGAAA	-16	NA	122879680	122898615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122879761_122880670_122880757_122881597_122881668_122884716_122884853_122888268_122888724_122897792
transcript_20583.known	chr10	+	1705	7	FSM	ENSG00000179988.15	ENST00000368887.7	1705	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	15.1299922890485	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	16	True	ATTAAA	-17	NA	122980039	122990390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_20586.nic	chr10	+	1042	6	NIC	ENSG00000179988.15	novel	818	5	NA	NA	-97	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	21.4755675128738	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	16	True	ATTAAA	-17	NA	122954283	122990390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122987333_122987505_122990173
transcript_20590.known	chr10	+	1173	6	FSM	ENSG00000179988.15	ENST00000406217.8	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	9.45304183847718	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122980086	True	NA	16	True	ATTAAA	-17	NA	122980400	122990390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122980696_122982732_122983025_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_20596.nic	chr10	+	871	5	NIC	ENSG00000179988.15	novel	818	5	NA	NA	-97	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	22.3941956765587	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	NA	False	NA	16	True	ATTAAA	-17	NA	122954283	122990390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_122954569_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_20597.known	chr10	+	818	5	FSM	ENSG00000179988.15	ENST00000465232.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.9536639438871	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGTCTCATTTTGGTA	122954210	True	NA	16	True	ATTAAA	-17	NA	122954380	122990390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122954569_122983271_122983515_122986299_122986376_122986868_122986963_122990173
transcript_20599.known	chr10	+	696	5	FSM	ENSG00000179988.15	ENST00000483455.5	696	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	24.8243831746128	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAATATTGTACAGAAGTAT	122980216	False	NA	-39	True	NA	NA	NA	122980530	122990335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_122980696_122983271_122983471_122986299_122986376_122986868_122986963_122990173
transcript_206.known	SIRV2	+	523	1	FSM	SIRV2B	SIRV205	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7224	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCGTCTACCGCTTCTT	NA	False	NA	NA	False	NA	NA	NA	1108	1631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_+_1100_1600
transcript_20601.known	chr10	-	4532	5	FSM	ENSG00000095574.12	ENST00000368886.10	4532	5	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	7.54983443527075	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGTTTTTCTTTTTTGG	-123007685	True	NA	-1	True	AATAAA	-21	NA	123008795	122990806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_122994724_122995993_122996177_122998492_122998672_123007025_123007177_123008693
transcript_2061.known	chr1	+	3104	6	FSM	ENSG00000162493.17	ENST00000294489.10	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	164.449870781342	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	NA	False	NA	15	True	AATAAA	-19	NA	13583464	13617957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_20610.known	chr10	+	5848	11	FSM	ENSG00000196177.13	ENST00000358776.7	5848	11	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_6	14.3443368616329	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTGGTACTCTTATAA	123007153	True	NA	13	True	AATAAA	-18	NA	123009005	123058290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048_123051187_123053060_123053161_123053694
transcript_20617.nic	chr10	+	1223	9	ISM	ENSG00000196177.13	ENST00000358776.7	5848	11	-50	7083	-23	-2671	5prime_fragment	FALSE	canonical	3	94	junction_6	10.295630140987	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAAAAGTAATTCA	123007103	True	NA	NA	False	NA	NA	NA	123008955	123051207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_123009072_123034355_123034516_123037746_123037848_123040465_123040673_123041208_123041380_123043045_123043172_123044392_123044486_123047208_123047299_123051048
transcript_2063.known	chr1	+	2801	6	FSM	ENSG00000162493.17	ENST00000376057.8	2801	6	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_5	168.31803230789	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578885	True	NA	15	True	AATAAA	-19	NA	13583761	13617957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614406_13615904
transcript_20631.known	chr10	+	1361	8	FSM	ENSG00000154473.18	ENST00000368858.9	1361	8	0	0	0	0	multi-exon	FALSE	canonical	3	1276	junction_7	507.078466737221	5132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATGTTTTTGAATGT	123126546	True	NA	26	True	AATAAA	-21	NA	123154414	123165365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123165046
transcript_20632.known	chr10	+	7703	8	FSM	ENSG00000154473.18	ENST00000368865.9	7703	8	0	0	0	0	multi-exon	TRUE	canonical	3	1332	junction_7	487.877619315102	2365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGCCTCATTTGTACC	123126533	True	NA	18	True	AATAAA	-13	NA	123154401	123170467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_123154486_123154917_123155113_123155657_123155728_123157728_123157881_123160406_123160566_123162235_123162414_123162611_123162829_123163819
transcript_20633.known	chr10	-	4810	8	FSM	ENSG00000182022.18	ENST00000346248.7	4810	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	9.79379228628721	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCCTGGTGCATGAGT	-124092415	False	NA	2	True	NA	NA	NA	124092454	124007667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124010340_124012332_124012481_124021255_124021413_124038514_124038672_124042300_124042448_124044579_124044920_124045666_124046725_124092323
transcript_20651.known	chr10	-	2039	10	FSM	ENSG00000065154.12	ENST00000368845.6	2039	10	0	0	0	0	multi-exon	FALSE	canonical	3	776	junction_4	39.3333333333333	1566	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTGATGATTATTCA	-124395982	True	NA	-1	True	AATAAA	-19	NA	124418923	124397302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124398103_124400839_124400985_124401725_124401840_124402926_124403056_124403797_124403921_124405435_124405564_124408541_124408638_124408740_124408966_124411972_124412201_124418872
transcript_20658.known	chr10	+	1634	7	FSM	ENSG00000107902.14	ENST00000368842.10	1634	7	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	86.0697391654001	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458718	True	NA	4	True	AGTAAA	-18	NA	124461822	124614141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179_124517272_124613263
transcript_20660.known	chr10	+	840	6	FSM	ENSG00000107902.14	ENST00000392757.8	840	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	127.678659140829	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTTTGACTATTTTGGGA	124458729	True	NA	4	True	AATAAA	-22	NA	124461833	124498514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124498327
transcript_20662.nic	chr10	+	874	6	ISM	ENSG00000107902.14	ENST00000368842.10	1634	7	-13	96765	-13	0	5prime_fragment	FALSE	canonical	3	199	junction_5	69.9697077312747	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGTATGTGGGCATTCA	124458705	True	NA	NA	False	AATAAA	-24	NA	124461809	124517376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124517179
transcript_20663.known	chr10	+	1522	6	FSM	ENSG00000107902.14	ENST00000368839.1	1522	6	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_5	126.900591015172	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGACTCAGGCTTTGA	124458738	True	NA	4	True	AGTAAA	-18	NA	124461842	124614141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035_124498129_124613263
transcript_20669.nic	chr10	+	1064	5	ISM	ENSG00000107902.14	ENST00000392757.8	840	6	-24	-1	-13	1	intron_retention	FALSE	canonical	3	324	junction_3	33.0945614867458	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGACTATTTTGGGAT	124458705	True	NA	5	True	AATAAA	-23	NA	124461809	124498515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_124461988_124484138_124484327_124488421_124488576_124496960_124497025_124498035
transcript_2067.known	chr1	+	2737	6	FSM	ENSG00000162493.17	ENST00000621990.5	2737	6	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_5	164.449870781342	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGAGTCAGACTTTTGTT	13578955	True	NA	15	True	AATAAA	-19	NA	13583831	13617957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_20691.known	chr10	-	3599	7	FSM	ENSG00000203791.15	ENST00000368836.7	3599	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	119.611523971007	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAAATTGTCCTTGAATG	-124788602	True	NA	NA	False	ACTAAA	-16	NA	124791887	124757833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124760504_124762299_124762559_124765391_124765609_124774674_124774783_124789042_124789158_124790272_124790339_124791723
transcript_207.known	SIRV2	-	740	3	FSM	SIRV2A	SIRV204	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	2745	junction_1	217	4957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTATCCTATATCGGA	NA	False	NA	NA	False	NA	NA	NA	4732	3643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV2_-_3826_3966_4480_4687
transcript_20713.known	chr10	-	1013	6	FSM	ENSG00000203791.15	ENST00000464099.5	1013	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	147.614904396541	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTAAACAGTTAAAAACT	-124788583	True	NA	-22	True	ATTAAA	-15	NA	124791868	124760145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124760504_124765391_124765609_124774674_124774783_124789038_124789158_124790272_124790339_124791723
transcript_2073.known	chr1	+	571	6	FSM	ENSG00000162493.17	ENST00000509009.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	305.762391408754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCTGTGCCCTGTCCCTG	13584073	True	NA	NA	False	AAAAAG	-10	NA	13584092	13615964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584189_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_20735.known	chr10	+	2955	9	FSM	ENSG00000165660.8	ENST00000298492.6	2955	9	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	11.2249721603218	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCATTGTTTTAATGTCT	124799782	True	NA	4	True	AATAAA	-18	NA	124801818	124836667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_124801902_124806830_124806922_124816575_124816613_124819383_124819451_124826594_124826786_124828755_124828876_124829392_124829478_124831348_124831464_124834501
transcript_20746.known	chr10	-	2036	11	FSM	ENSG00000175029.17	ENST00000411419.6	2036	11	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_10	240.290261974971	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCCCTTGGGCACAGCA	-125158445	True	NA	-27	True	AATAAA	-18	NA	125161026	124989224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125110989_125111094_125160826
transcript_2075.known	chr1	+	1368	6	FSM	ENSG00000162493.17	ENST00000376061.8	1368	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	305.762391408754	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCGAGGAAGCTGCTGG	13584247	False	NA	NA	False	NA	NA	NA	13584266	13616782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584342_13607172_13607307_13610386_13610517_13613686_13613726_13614299_13614412_13615904
transcript_20767.nnic	chr10	-	2505	10	NIC	ENSG00000175029.17	novel	2036	11	NA	NA	-90	249	combination_of_known_splicesites	FALSE	canonical	3	65	junction_9	238.141414569859	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTATTAAGTTTCACAAG	-125161152	False	NA	-15	True	AGTAAA	-29	NA	125161260	124988885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_124989699_124992694_124992813_124993201_124993330_124993854_124993986_124994468_124994684_124997963_124998171_125002959_125003105_125003337_125003493_125038996_125039156_125160826
transcript_2078.known	chr1	+	786	5	FSM	ENSG00000162493.17	ENST00000510906.5	786	5	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_4	47.3623004086584	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCGTGCCTGTAGTCTC	13578956	True	NA	NA	False	AATAGA	-26	NA	13583832	13614514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_13584101_13607172_13607307_13610386_13610517_13613686_13613726_13614299
transcript_20783.known	chr10	+	4483	25	FSM	ENSG00000107938.18	ENST00000356792.9	4483	25	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_6	21.5512551194176	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTATTTTTCCAAT	125714726	True	NA	15	True	AATAAA	-19	NA	125719708	125764139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810_125723937_125725317_125725443_125725681_125725839_125729002_125729105_125729357_125729480_125730287_125730400_125733403_125733552_125733634_125733744_125734071_125734184_125735643_125735905_125737917_125737990_125738294_125738446_125740462_125740652_125741000_125741202_125743057_125743277_125745706_125745931_125747535_125747695_125747862_125748013_125749411_125749566_125752798_125752915_125753693_125753846_125763300
transcript_20788.known	chr10	-	764	5	FSM	ENSG00000224023.10	ENST00000527483.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.84767985741633	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCAGTGTTCTAATAGTT	-125719363	True	NA	NA	False	AATAAA	-16	NA	125719460	125700435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125700583_125707051_125707201_125707400_125707760_125709497_125709568_125719421
transcript_20790.nic	chr10	+	1038	4	ISM	ENSG00000107938.18	ENST00000525091.5	4211	20	-10	24748	-10	-11401	5prime_fragment	FALSE	canonical	3	119	junction_2	14.0554457615387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACGTTTCAGTCAGCGATG	125714709	True	NA	NA	False	AATAAA	-20	NA	125719691	125724348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_125719916_125721203_125721413_125723067_125723135_125723810
transcript_20791.nic	chr10	-	872	4	ISM	ENSG00000224023.10	ENST00000423178.6	2600	5	-19	1947	-19	0	5prime_fragment	TRUE	canonical	1	1	junction_3	4.96655480858378	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	-125719488	True	NA	-10	True	NA	NA	NA	125719585	125707236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_125707760_125709497_125709568_125711473_125711589_125719421
transcript_20793.known	chr10	-	718	3	FSM	ENSG00000224023.10	ENST00000528844.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	2.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGCTGCAATGAGTGTT	-125719449	True	NA	-10	True	NA	NA	NA	125719546	125707236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125707760_125709497_125709568_125719421
transcript_20796.known	chr10	+	1380	4	FSM	ENSG00000107938.18	ENST00000368812.1	1380	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	19.2584757675391	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTTTTCCAATTTCC	125749286	False	NA	19	True	AATAAA	-23	NA	125749296	125764143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125749566_125752798_125752915_125753693_125753846_125763300
transcript_20801.nic	chr10	-	1572	11	NIC	ENSG00000188690.15	novel	1695	13	NA	NA	4	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_4	136.773133326688	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGTGTATGGTTGCTGTG	-125816807	True	NA	-9	True	AATAAA	-23	NA	125823244	125788581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_125789006_125789282_125789529_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_20803.known	chr10	-	1279	10	FSM	ENSG00000188690.15	ENST00000649536.1	1279	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	139.507068717761	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	-125816764	True	NA	-13	True	AATAAA	-19	NA	125823201	125788585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125789006_125789282_125789364_125794879_125794979_125796102_125796189_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_20804.known	chr10	-	1336	10	FSM	ENSG00000188690.15	ENST00000368797.10	1336	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.462055252873	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTGTATGGTTGC	-125816821	True	NA	-13	True	AATAAA	-19	NA	125823258	125788585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125789006_125794879_125794979_125796102_125796189_125798064_125798146_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_20807.known	chr10	-	1556	7	FSM	ENSG00000188690.15	ENST00000368778.7	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	118.365253910653	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTTGTGGGATTAAGT	-125816759	True	NA	-1	True	AATAAA	-20	NA	125823196	125802056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_125803025_125807412_125807488_125812213_125812289_125815033_125815131_125816176_125816261_125816436_125816526_125823028
transcript_20825.known	chr10	+	1234	7	FSM	ENSG00000107949.17	ENST00000278100.11	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_6	341.857873326848	6230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACACAGTGTTATTTTCT	125800836	True	NA	5	True	AATAAA	-27	NA	125823545	125836551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125836103
transcript_20826.known	chr10	+	1433	8	FSM	ENSG00000107949.17	ENST00000368759.5	1433	8	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_7	509.475320345173	1646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTAGTAGTTGAGTCTT	125800836	True	NA	5	True	ATTAAA	-18	NA	125823545	125853695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254_125841331_125853124
transcript_20827.known	chr10	+	2337	7	FSM	ENSG00000107949.17	ENST00000299130.7	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_6	411.948891112586	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTCTCCATCTCTTTAT	125800836	True	NA	16	True	AATAAA	-20	NA	125823545	125842805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125823723_125826590_125826666_125827557_125827639_125830561_125830652_125831419_125831608_125833771_125833947_125841254
transcript_20839.known	chr10	+	1271	11	FSM	ENSG00000203780.12	ENST00000368693.6	1271	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.61801050302511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	125896383	True	NA	7	True	AATACA	-14	NA	125896563	126009592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_20844.nnic	chr10	+	1135	10	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	125896504	False	NA	7	True	AATACA	-14	NA	125896521	126009592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_125896656_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009053_126009132_126009221_126009267_126009372
transcript_20850.nic	chr10	+	1156	9	NIC	ENSG00000203780.12	novel	1271	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	4.27200187265877	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	125896375	True	NA	7	True	AATACA	-14	NA	125896555	126009592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_+_125896656_125980160_125980339_125988550_125988676_125995416_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009372
transcript_20858.nnic	chr10	+	831	4	NNC	ENSG00000203780.12	novel	1271	11	NA	NA	-5	-63441	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.94392028877595	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTAGTCCTCTGATA	125896378	True	NA	NA	False	AATAAA	-20	NA	125896558	125917455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_125896656_125907456_125907503_125913092_125913190_125916864
transcript_20864.known	chr10	+	753	6	FSM	ENSG00000203780.12	ENST00000456942.1	753	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	3.49857113690718	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTGCGTATGTGGTACC	NA	False	NA	7	True	AATACA	-14	NA	125995416	126009592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_125995499_125996549_125996625_125997419_125997486_126004883_126005050_126008406_126008551_126009372
transcript_20870.nnic	chr10	+	666	2	NNC	ENSG00000150760.13	novel	6797	52	NA	NA	-31	-207782	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCCTAGTCCCCTTGTTG	126900700	True	NA	NA	False	AATAAA	-17	NA	126905377	126920314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_126905564_126919834
transcript_20872.known	chr10	-	12716	15	FSM	ENSG00000148773.14	ENST00000368654.8	12716	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_13	42.9316019847803	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATGGTATTTTTATTATA	-128121396	True	NA	0	True	AATAAA	-25	NA	128126423	128096658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_128099256_128101257_128101702_128102578_128109424_128110377_128110534_128111644_128111817_128111926_128112046_128112132_128112446_128113426_128113603_128114927_128116008_128116490_128116537_128119252_128119320_128122880_128122997_128123090_128123170_128125575_128125757_128126098
transcript_20873.known	chr10	-	733	3	FSM	ENSG00000148773.14	ENST00000484853.1	733	3	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_2	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGGGGTCTTAGTGTTC	-128112438	False	NA	NA	False	AATAAA	-14	NA	128112449	128111519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_128111817_128111926_128112046_128112132
transcript_20876.known	chr10	+	4678	5	FSM	ENSG00000170430.10	ENST00000651593.1	4678	5	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	7.88986691902975	1597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTCACATCAGTTT	129464046	True	NA	NA	False	ATTAAA	-17	NA	129467240	129770983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_129467297_129536240_129536378_129707894_129708044_129759201_129759342_129766787
transcript_20878.known	chr10	+	959	2	FSM	ENSG00000170430.10	ENST00000482547.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCACTCCTATGCTTGGT	129464067	True	NA	NA	False	AAGAAA	-8	NA	129467261	129537164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_129467297_129536240
transcript_20898.known	chr10	-	843	4	FSM	ENSG00000237489.5	ENST00000637128.2	843	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	6.18241233033047	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTAATCTTGGAGTGAA	-130110608	True	NA	-4	True	ATTAAA	-23	NA	130110830	130063895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_130064384_130079565_130079629_130079736_130079902_130110703
transcript_2091.known	chr1	+	1843	4	FSM	ENSG00000171729.14	ENST00000376014.7	1843	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.1529071070248	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGTACACTTAACTAGT	15152496	True	NA	NA	False	NA	NA	NA	15152565	15220339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15152785_15210489_15210563_15214894_15215432_15219325
transcript_20922.known	chr10	+	1318	11	FSM	ENSG00000108010.12	ENST00000331244.10	1318	11	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_4	133.421737359397	7204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTAAATCTCTTTTTCTTA	130107011	True	NA	13	True	ATTAAA	-25	NA	130136390	130179672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341
transcript_20923.known	chr10	+	3827	12	FSM	ENSG00000108010.12	ENST00000368644.5	3827	12	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_11	528.628820394865	1099	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTTTTGCCTTTTTTTG	130107019	True	NA	30	True	NA	NA	NA	130136398	130182881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130136513_130145210_130145320_130159994_130160070_130160795_130160998_130166506_130166680_130166918_130166981_130169432_130169491_130171583_130171637_130174866_130174907_130174996_130175090_130179341_130179421_130180112
transcript_20924.known	chr10	+	317	2	FSM	ENSG00000108010.12	ENST00000496195.1	317	2	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTCCTCCTATTGAGA	130179361	False	NA	13	True	AATAAA	-24	NA	130179373	130180382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_130179421_130180112
transcript_20929.known	chr10	-	2861	6	FSM	ENSG00000176171.12	ENST00000368636.9	1542	6	-90	-1229	-46	1229	multi-exon	FALSE	canonical	3	2425	junction_1	204.269821559622	2499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGCGTATCTGAATG	-131981990	False	NA	NA	False	ATTAAA	-17	NA	131982013	131966454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_131968570_131970637_131970788_131970863_131970971_131973033_131973119_131973792_131973944_131981760
transcript_20930.known	chr10	+	2664	14	FSM	ENSG00000151640.13	ENST00000338492.9	2664	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	10.3059700053648	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGCCTGTGCATGGAAGGA	132186527	True	NA	24	True	ATTAAA	-17	NA	132186947	132205759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132187103_132190746_132190836_132192657_132192843_132194844_132195010_132196860_132196923_132197020_132197102_132198414_132198484_132198850_132198972_132200355_132200513_132200841_132200984_132201945_132202117_132202645_132202826_132203761_132203928_132204838
transcript_20934.known	chr10	-	1866	13	FSM	ENSG00000165752.17	ENST00000462160.5	1866	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.9164923283862	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATGTTGCATGTTCTGCGT	-132248972	True	NA	-11	True	NA	NA	NA	132249108	132207491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132208152_132209033_132209102_132209294_132209365_132222640_132222773_132222860_132222987_132224406_132224524_132225232_132225337_132225526_132225617_132225746_132225785_132226794_132226969_132227976_132228129_132245899_132245956_132249029
transcript_2094.nnic	chr1	-	712	2	Antisense	novelGene_ENSG00000142621.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTCCCCCTTTTTCCCTT	NA	False	NA	NA	False	AAAAAG	-1	NA	15388593	15385128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_15385605_15388357
transcript_20952.nnic	chr10	-	911	2	NNC	ENSG00000165752.17	novel	830	4	NA	NA	-46	737	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTTTGTGTCTAAT	-132330030	True	NA	NA	False	AATAAA	-24	NA	132331893	132329543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_-_132329997_132331435
transcript_20953.known	chr10	-	607	2	FSM	ENSG00000165752.17	ENST00000456004.1	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTCTTGCTTGTTATTG	-132329974	True	NA	1	True	AATAAA	-25	NA	132331837	132330280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132330486_132331435
transcript_20954.known	chr10	+	7971	11	FSM	ENSG00000148814.18	ENST00000368614.8	7971	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_10	6.9778220097678	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATATCCTATTCTGTCCT	132331918	True	NA	NA	False	AATAAA	-17	NA	132332192	132381508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132351606_132351754_132355789_132355887_132361456_132361576_132365423_132365551_132375065
transcript_20958.known	chr10	+	1809	9	FSM	ENSG00000148814.18	ENST00000344079.9	1809	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	7.14142842854285	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCCGTTGTGTGTGTGCTG	132331879	True	NA	1	True	AATAAA	-14	NA	132332153	132353395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132332257_132333476_132333735_132337564_132337696_132342212_132342272_132344497_132344651_132347983_132348357_132348962_132349058_132351606_132351754_132352905
transcript_2096.known	chr1	+	2422	4	FSM	ENSG00000142634.13	ENST00000375980.9	2422	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	20.9973543306982	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTATGGTTCTTGATG	15405647	True	NA	18	True	GATAAA	-15	NA	15409887	15430339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15410280_15425870_15426019_15427149_15427285_15428592
transcript_20960.nnic	chr10	+	1593	3	NNC	ENSG00000171813.14	novel	2013	3	NA	NA	10950	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	NA	False	NA	72	True	AATAAA	-18	NA	132408149	132417859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_132408826_132409761_132409880_132417060
transcript_20963.nnic	chr10	+	1029	3	NNC	ENSG00000171813.14	novel	2013	3	NA	NA	11356	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	132408520	True	NA	72	True	AATAAA	-18	NA	132408555	132417859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_132408668_132409761_132409880_132417060
transcript_20964.known	chr10	+	2615	3	FSM	ENSG00000171813.14	ENST00000305233.6	2615	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATCTGCTCTTTCTTTGT	132397056	True	NA	72	True	AATAAA	-18	NA	132397199	132417859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_132397352_132404625_132406290_132417060
transcript_20965.known	chr10	-	1590	2	FSM	ENSG00000226900.2	ENST00000656988.1	1590	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTGTGTTTTAGT	-132518216	True	NA	NA	False	AAGAAA	-25	NA	132518280	132510758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132512162_132518093
transcript_20967.known	chr10	-	1578	2	FSM	ENSG00000226900.2	ENST00000654872.1	1578	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTCTGTGTTTTAGT	-132518227	True	NA	NA	False	AAGAAA	-25	NA	132518291	132510758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132512162_132518116
transcript_20970.nic	chr10	-	1015	7	NIC	ENSG00000171811.14	novel	610	5	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	0.897527467855751	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTGCTTCCATCT	-132837046	True	NA	NA	False	AATAAA	-17	NA	132837063	132832615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr10_-_132832803_132833357_132833526_132834040_132834124_132834653_132834776_132835303_132835435_132836141_132836219_132836816
transcript_20971.known	chr10	-	1825	9	FSM	ENSG00000171811.14	ENST00000368585.3	1825	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	6.15299723711948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAAATTGAAGTTTATC	NA	False	NA	NA	False	TATAAA	-18	NA	132942823	132929184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132929805_132934751_132934863_132936960_132937056_132937551_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_20974.known	chr10	-	1156	6	FSM	ENSG00000171811.14	ENST00000475340.1	1156	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2.33238075793812	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAACCTCTACCGAATTG	-132942146	True	NA	-10	True	AATAAA	-15	NA	132942543	132937114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_132937676_132938588_132938754_132940995_132941061_132941590_132941723_132941979_132942105_132942435
transcript_20977.known	chr10	+	1966	4	FSM	ENSG00000171798.19	ENST00000683259.1	1966	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	21.1187120819429	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTGGTCTCATTCA	133160321	True	NA	8	True	ATTAAA	-19	NA	133160440	133180840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133160570_133167380_133167580_133168253_133168313_133179261
transcript_20978.known	chr10	+	1214	2	FSM	ENSG00000171794.4	ENST00000304477.3	1214	2	0	0	0	0	multi-exon	FALSE	canonical	3	1217	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGGGCTGTGTAGGAGTG	133218202	True	NA	25	True	AATAAA	-18	NA	133230216	133231558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133230839_133230966
transcript_20979.known	chr10	+	2459	3	FSM	ENSG00000151650.8	ENST00000325980.10	2459	3	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	26	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGCCCGTGGAGATTGCTTT	133236232	True	NA	17	True	GATAAA	-18	NA	133237854	133241928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133238156_133239675_133239837_133239931
transcript_2098.known	chr1	-	2808	9	FSM	ENSG00000132906.18	ENST00000333868.10	2808	9	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_5	21.540659228538	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTTGCATAGTTGTCA	-15521926	True	NA	-10	True	AATAAA	-14	NA	15524215	15491400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507076_15507872_15507908_15518109_15518396_15524068
transcript_20983.known	chr10	-	408	1	FSM	ENSG00000273980.1	ENST00000611956.1	408	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCTTCTGTTTTTTGTTTT	-133257533	False	NA	1	True	AGTAAA	-22	NA	133257551	133257143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133257100_133257600
transcript_20984.nic	chr10	-	1000	2	ISM	ENSG00000151651.16	ENST00000485491.6	2441	20	9328	-545	-3675	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTAGATTCTTGTTAGA	-133267242	False	NA	-6	True	AATAAA	-13	NA	133267540	133262422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_-_133263234_133267351
transcript_20986.known	chr10	-	3896	18	FSM	ENSG00000130640.15	ENST00000682905.1	3896	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_16	60.0707771707358	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	-133306286	True	NA	-43	True	NA	NA	NA	133308846	133278674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302758_133302981_133308822
transcript_20987.known	chr10	-	3876	18	FSM	ENSG00000130640.15	ENST00000683786.1	3876	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_16	60.2665934306646	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGGTCTGGCCTGTGA	-133306312	True	NA	-43	True	NA	NA	NA	133308872	133278674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133279902_133281272_133281437_133282222_133282343_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300101_133302791_133302981_133308822
transcript_20989.known	chr10	-	3262	17	FSM	ENSG00000130640.15	ENST00000683383.1	3262	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	57.3955573193605	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCCTGAGGACTCACCCG	-133308945	False	NA	NA	False	NA	NA	NA	133308977	133279286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133279902_133281272_133281437_133283077_133283222_133283881_133284003_133285084_133285214_133285455_133285629_133288128_133288310_133288839_133289021_133289823_133289970_133292498_133292689_133293038_133293239_133293561_133293770_133297951_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_2099.known	chr1	-	1878	9	FSM	ENSG00000132906.18	ENST00000400777.7	1878	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	44.181444068749	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATCTATGAATTCTAAGT	-15521903	True	NA	-96	True	NA	NA	NA	15524192	15492365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15504610_15504759_15505989_15506080_15506898_15507134_15507872_15507908_15518109_15518396_15524068
transcript_20993.known	chr10	+	1084	6	FSM	ENSG00000198546.15	ENST00000361518.10	1084	6	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_5	30.0492928369371	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133304055	True	NA	14	True	TTTAAA	-27	NA	133308913	133313161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133309097_133309389_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_20994.nnic	chr10	+	862	5	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_3	230.897569281272	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133309098	True	NA	14	True	TTTAAA	-27	NA	133309369	133313161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_133309464_133309775_133309978_133310163_133310230_133311715_133311842_133312787
transcript_20995.nnic	chr10	+	898	5	NNC	ENSG00000198546.15	novel	1084	6	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	82	junction_4	205.823953902358	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133309096	True	NA	14	True	TTTAAA	-27	NA	133309367	133313161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr10_+_133309464_133309775_133309978_133310163_133310289_133311715_133311817_133312787
transcript_20996.nic	chr10	+	984	5	ISM	ENSG00000198546.15	ENST00000361518.10	1084	6	393	0	-133	0	3prime_fragment	FALSE	canonical	3	504	junction_4	32.5614803103299	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGAGTCTTCATTTC	133304448	False	NA	14	True	TTTAAA	-27	NA	133309306	133313161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr10_+_133309464_133309775_133309978_133310163_133310289_133311715_133311842_133312787
transcript_20997.known	chr10	+	587	5	FSM	ENSG00000165828.15	ENST00000463201.2	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.53553390593274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCGGTGGCTCACCTCTGTA	133347323	True	NA	NA	False	AATAAA	-16	NA	133347367	133352548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352114_133352246
transcript_20998.known	chr10	+	744	5	FSM	ENSG00000165828.15	ENST00000433452.6	744	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.707106781186548	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGTGCCGGGTGCCTGTA	133347328	True	NA	NA	False	AATACA	-14	NA	133347372	133352683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133347426_133350094_133350162_133351380_133351434_133352006_133352141_133352246
transcript_21.known	ERCC-00046	+	506	1	FSM	ERCC-00046A	DQ516748	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	100796	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00046_+_0_500
transcript_21000.known	chr10	-	2163	5	FSM	ENSG00000130640.15	ENST00000683031.1	2163	5	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_4	14.4308696896618	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGTAATCCCAGCACTTA	-133309102	False	NA	NA	False	AATGAA	-44	NA	133309134	133296755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133298112_133299426_133299604_133299984_133300114_133302791_133302981_133308822
transcript_21002.known	chr10	+	605	4	FSM	ENSG00000198546.15	ENST00000463816.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	238.109685275972	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGAATGTATTTTTAAACA	133309168	False	NA	-30	True	NA	NA	NA	133309439	133313117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133309464_133310163_133310289_133311715_133311842_133312787
transcript_21004.known	chr10	-	1306	2	FSM	ENSG00000130640.15	ENST00000480198.1	1306	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGGACTGGTATTAACC	-133306288	True	NA	NA	False	NA	NA	NA	133308848	133301700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133302981_133308822
transcript_21011.known	chr10	-	628	6	FSM	ENSG00000148803.12	ENST00000368551.1	628	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	87.5844735098636	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGTGAAAATGATGGA	-133357605	False	NA	-67	True	NA	NA	NA	133357737	133355202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357656
transcript_21014.known	chr10	-	867	6	FSM	ENSG00000148803.12	ENST00000465384.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	102.208414526398	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAGTCCAATTCCAGCTC	-133357869	False	NA	-33	True	NA	NA	NA	133358001	133355168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357463_133357922
transcript_21018.known	chr10	-	590	5	FSM	ENSG00000148803.12	ENST00000447176.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	109.609249153527	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAATTCCAGCTCTGTTC	-133357863	False	NA	-28	True	NA	NA	NA	133357995	133355163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357922
transcript_21026.known	chr10	-	762	6	FSM	ENSG00000148803.12	ENST00000368552.7	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	79.0797066256571	605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCTCTGTTCTCAC	-133355065	True	NA	-24	True	NA	NA	NA	133358025	133355159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355506_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_21027.known	chr10	-	689	6	FSM	ENSG00000148803.12	ENST00000278025.9	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	28.6635657237546	1774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCTCTGTTCTCACGC	-133355059	True	NA	-22	True	NA	NA	NA	133358019	133355157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133355437_133355737_133355812_133356639_133356739_133356942_133357014_133357186_133357256_133357922
transcript_21031.known	chr10	-	1277	8	FSM	ENSG00000127884.5	ENST00000368547.4	1277	8	0	0	0	0	multi-exon	FALSE	canonical	3	1857	junction_2	109.924278204478	7069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCACGCCTTGTAGTCATG	-133356964	True	NA	-46	True	ATTAAA	-20	NA	133373354	133362484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_-_133362934_133364657_133364726_133365975_133366096_133366888_133366994_133368922_133369023_133369903_133370032_133370559_133370758_133373245
transcript_21034.known	chr10	+	1283	11	FSM	ENSG00000148824.19	ENST00000477902.6	1283	11	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	134.881281132706	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATAACCTGTAACCTTTAA	133380231	True	NA	NA	False	NA	NA	NA	133394093	133420464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394185_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_21040.known	chr10	+	3424	11	FSM	ENSG00000148824.19	ENST00000317502.11	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_7	55.9396102953891	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTTGGAGCAAAGTGGGT	133380294	True	NA	4	True	NA	NA	NA	133394156	133422520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133401591_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_21051.known	chr10	+	2730	10	FSM	ENSG00000148824.19	ENST00000460848.5	2730	10	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_6	39.8859485143439	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTGCAGATCACGAAGTG	133380333	True	NA	-11	True	NA	NA	NA	133394195	133421307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528_133399620_133401528_133402246_133402691_133402774_133419479_133419593_133420025
transcript_21061.known	chr10	+	953	9	FSM	ENSG00000148824.19	ENST00000432508.3	953	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	159.336465929805	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGTTGAGGCTCAAGAC	133380311	True	NA	NA	False	NA	NA	NA	133394173	133420219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133402148_133402246_133402691_133402774_133419479_133419593_133420025
transcript_21071.known	chr10	+	693	6	FSM	ENSG00000148824.19	ENST00000498790.5	693	6	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_2	35.9421757827764	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTCGTTCTGTGAATTTC	133380361	True	NA	-68	True	NA	NA	NA	133394223	133399804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr10_+_133394333_133395712_133395778_133396162_133396268_133398434_133398516_133399169_133399227_133399528
transcript_21080.nnic	chr11	-	710	5	NNC	ENSG00000177951.18	novel	2916	3	NA	NA	-35	1946	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	96.253246698488	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATCATGTCTCATTG	-207322	False	NA	-6	True	NA	NA	NA	207434	200977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_201226_201560_201742_205610_205668_205951_206044_207302
transcript_21085.nnic	chr11	-	529	4	NNC	ENSG00000177951.18	novel	2916	3	NA	NA	-35	1946	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	90.0419655247238	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTATCATGTCTCATTG	-207322	False	NA	-6	True	NA	NA	NA	207434	200977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_201226_205610_205668_205951_206044_207302
transcript_21086.known	chr11	-	2819	4	FSM	ENSG00000177951.18	ENST00000382762.8	2792	4	-29	2	-29	-2	multi-exon	FALSE	canonical	3	180	junction_1	6.64997911442	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCATATGGTCTCTGTCGT	-207316	False	NA	-4	True	AATAAA	-33	NA	207428	202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_205470_205610_205668_205951_206044_207302
transcript_21089.known	chr11	-	2916	3	FSM	ENSG00000177951.18	ENST00000325147.13	2916	3	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATATGGTCTCTGTCGTCC	-205318	True	NA	-2	True	AATAAA	-35	NA	207382	202923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_205668_205951_206044_207302
transcript_21091.known	chr11	+	3506	10	FSM	ENSG00000177963.15	ENST00000526104.6	3506	10	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	35.9536738966502	249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGTGTAAATTATCAAA	206859	True	NA	17	True	AATAAA	-20	NA	207707	215113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_208939_209270_209319_209406_210001_210570_210663_211198_211350_212415_212512_212614_212760_212836_212982_213298_213419_214229
transcript_21095.nic	chr11	-	2580	7	NIC	ENSG00000142082.15	novel	2882	7	NA	NA	-29	-397	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	69.9271446260718	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATGTTCCTTTTTTATT	-236294	False	NA	-2	True	AAAAAG	-24	NA	236383	215426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_216719_218777_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_21098.known	chr11	-	1475	7	FSM	ENSG00000142082.15	ENST00000525319.5	1475	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	81.1582815655104	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTATTTTTAATGAGAG	-234809	True	NA	-69	True	NA	NA	NA	236354	216205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233438_236193
transcript_21099.known	chr11	-	2882	7	FSM	ENSG00000142082.15	ENST00000382743.9	2882	7	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_6	32.0767309223784	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGAGGGGCATTTTCCTTG	-234797	True	NA	NA	False	TATAAA	-17	NA	236342	215029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236047
transcript_21100.known	chr11	-	1588	7	FSM	ENSG00000142082.15	ENST00000532837.5	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	68.8565336204359	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-234798	True	NA	-42	True	GGGGCT	-22	NA	236343	216178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236193
transcript_21102.known	chr11	-	1225	7	FSM	ENSG00000142082.15	ENST00000529382.5	1225	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	80.431475320438	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGCAGGTGAAACCAGAATA	-236745	False	NA	NA	False	NA	NA	NA	236834	216610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_224077_224240_230451_230553_232982_233216_233342_233535_236615
transcript_21106.known	chr11	-	1235	6	FSM	ENSG00000142082.15	ENST00000532956.5	1235	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.8460494000761	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGGGCTGTGTTTACAGT	-234807	True	NA	NA	False	NA	NA	NA	236352	216524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_216719_218831_219042_230451_230553_232982_233216_233342_233535_236047
transcript_21112.nic	chr11	-	1073	4	NIC	ENSG00000142082.15	novel	1588	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_3	96.9065987891892	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTTCCAGCATGAAATA	-234809	True	NA	-42	True	GGGGCT	-22	NA	236354	216178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_216719_218831_219042_224077_224240_236193
transcript_21119.known	chr11	+	1591	11	FSM	ENSG00000185627.19	ENST00000431206.6	1591	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	355.170508347751	4195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225305	True	NA	16	True	AATAAA	-16	NA	236976	252981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_2112.known	chr1	-	1621	5	FSM	ENSG00000132906.18	ENST00000348549.9	1621	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	50.4058528347651	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTATTTCTTCCCTC	-15522058	True	NA	0	True	AATAAA	-23	NA	15524347	15492269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15493036_15493891_15494002_15495272_15495453_15518109_15518396_15524068
transcript_21127.known	chr11	+	1589	13	FSM	ENSG00000185627.19	ENST00000532097.6	1589	13	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_10	81.4876865272021	8531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGGCTCTGTTTTCTTG	225304	True	NA	19	True	AATAAA	-19	NA	236975	252984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_21128.known	chr11	+	1632	12	FSM	ENSG00000185627.19	ENST00000525665.5	1632	12	0	0	0	0	multi-exon	FALSE	canonical	3	1063	junction_9	80.6429740039289	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTCTGCTTTGTTCTTCT	225328	True	NA	1	True	AATAAA	-1	NA	236999	252966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244040_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_21129.known	chr11	+	1427	12	FSM	ENSG00000185627.19	ENST00000352303.9	1427	12	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_10	327.660300810569	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCTATAATAAACCCCTCT	225354	True	NA	-12	True	NA	NA	NA	237025	252953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244040_244076_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251819_251937_252504
transcript_21130.known	chr11	+	1489	12	FSM	ENSG00000185627.19	ENST00000382671.8	1489	12	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	322.619623531495	4216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTGGCTCTGTTTTC	225366	True	NA	16	True	AATAAA	-16	NA	237037	252981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_237145_238997_239077_244160_244217_244425_244470_244674_244762_247276_247449_248775_248856_248931_249058_250802_250866_251545_251627_251819_251937_252504
transcript_21136.known	chr11	-	736	2	FSM	ENSG00000206013.2	ENST00000382614.2	736	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCTCCTGGCCTCTTTCC	-299501	False	NA	NA	False	ATTAAA	-19	NA	299526	298199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_298714_299304
transcript_2114.known	chr1	+	6034	15	FSM	ENSG00000116138.13	ENST00000375847.8	6034	15	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	7.66651877999928	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGGGGTAGCCCTTGCAT	15524631	True	NA	23	True	AATAAA	-20	NA	15526847	15571733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15526959_15529087_15529273_15534236_15534304_15536474_15536815_15544398_15544584_15546766_15546872_15548269_15548429_15559525_15559657_15562141_15562326_15563928_15564112_15564282_15564360_15565918_15566000_15566081_15566181_15567098_15567270_15567777
transcript_21144.known	chr11	+	588	3	FSM	ENSG00000185201.18	ENST00000533141.1	588	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	719	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCTCGCCCTGCCCCCAG	NA	False	NA	NA	False	NA	NA	NA	307630	309230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_307793_308230_308439_309012
transcript_21146.known	chr11	+	634	3	FSM	ENSG00000185201.18	ENST00000527146.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGTGACTTCACC	294078	False	NA	26	True	AATAAA	-15	NA	308319	309392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_308754_308890_309012
transcript_21150.known	chr11	+	844	3	FSM	ENSG00000185885.17	ENST00000328221.5	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	9849	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGTCATTCAATAAAGTGC	299285	False	NA	-7	True	NA	NA	NA	313526	315240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_313692_313996_314357_314921
transcript_21151.known	chr11	+	730	3	FSM	ENSG00000185885.17	ENST00000528780.5	730	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9852.5	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	299264	False	NA	25	True	AATAAA	-17	NA	313505	315272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_313692_314163_314357_314921
transcript_21154.known	chr11	+	841	3	FSM	ENSG00000185885.17	ENST00000680588.1	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9852.5	50789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	295799	False	NA	24	True	AATAAA	-16	NA	310040	315271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_310172_313996_314357_314921
transcript_21157.known	chr11	+	835	3	FSM	ENSG00000185885.17	ENST00000681577.1	835	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	688.5	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314642_314810_314921
transcript_2116.known	chr1	-	3095	7	FSM	ENSG00000116771.6	ENST00000375826.4	3095	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	4.81894409826699	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTGTAATCTTAAAATAAC	-15584210	True	NA	-33	True	ATTAAA	-21	NA	15585051	15571698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15573725_15574756_15574842_15577684_15577865_15578858_15579055_15580093_15580143_15583192_15583396_15584695
transcript_21160.known	chr11	+	556	2	FSM	ENSG00000185201.18	ENST00000602569.2	556	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTGTGACTTCACCT	294011	False	NA	27	True	AATAAA	-16	NA	308252	309393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_309023
transcript_21161.known	chr11	+	382	2	FSM	ENSG00000288681.1	ENST00000399815.2	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	2320	junction_1	0	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	294166	False	NA	25	True	AATAAA	-17	NA	308407	315272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_314921
transcript_21162.known	chr11	+	183	2	FSM	ENSG00000185201.18	ENST00000680099.1	183	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGAGGCATCATTGAGG	294267	False	NA	NA	False	NA	NA	NA	308508	309165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308539_309012
transcript_21163.known	chr11	+	183	2	FSM	ENSG00000185201.18	ENST00000679636.1	183	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCAGGAGGCATCATTGAGG	294456	False	NA	NA	False	NA	NA	NA	308697	309165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308728_309012
transcript_21164.known	chr11	+	656	2	FSM	ENSG00000185885.17	ENST00000679380.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	236442	True	NA	24	True	AATAAA	-16	NA	314039	315271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314932
transcript_21165.known	chr11	+	704	2	FSM	ENSG00000185885.17	ENST00000681180.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314393_314921
transcript_21168.known	chr11	+	713	2	FSM	ENSG00000185201.18	ENST00000399817.9	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGACTTCACCTGGGG	293864	True	NA	31	True	AATAAA	-20	NA	308105	309397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_309017
transcript_21169.known	chr11	+	603	3	FSM	ENSG00000185201.18	ENST00000680197.1	603	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	723	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTATATGTTTCTGGTGC	293891	True	NA	11	True	NA	NA	NA	308132	309377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_308439_309012_309253_309320
transcript_21170.known	chr11	+	662	2	FSM	ENSG00000185885.17	ENST00000681938.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	1057	junction_1	0	2802	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGATGCTGTGACTTCATCT	236442	True	NA	24	True	AATAAA	-16	NA	314039	315271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314926
transcript_21171.known	chr11	+	804	3	FSM	ENSG00000185885.17	ENST00000679765.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	664.5	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314357_314673_314810_314921
transcript_21172.known	chr11	+	611	2	FSM	ENSG00000185885.17	ENST00000681426.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGTGACTTCATCTG	236442	True	NA	25	True	AATAAA	-17	NA	314039	315272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_314342_314963
transcript_21176.known	chr11	-	517	3	FSM	ENSG00000142089.17	ENST00000681304.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272993	True	NA	-21	True	AATAAA	-18	NA	320860	319675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320275_320347_320729
transcript_21177.known	chr11	-	725	3	FSM	ENSG00000142089.17	ENST00000531688.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	227.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGCTGCGACTTCACC	-272974	True	NA	-24	True	AATAAA	-15	NA	320841	319678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320112_320249_320564
transcript_2118.known	chr1	+	1443	6	FSM	ENSG00000162460.7	ENST00000375782.2	1443	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0.748331477354788	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGTGCTTAGAATCACGAA	15742435	True	NA	5	True	AATAAA	-18	NA	15742498	15747982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15742648_15742834_15742908_15743019_15743195_15744159_15744581_15746866_15747055_15747545
transcript_21184.known	chr11	-	543	3	FSM	ENSG00000142089.17	ENST00000526811.4	543	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4073	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTCGCCCTGCCCCCGG	-321327	False	NA	-118	True	NA	NA	NA	321340	319772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320564_320773_321223
transcript_21188.known	chr11	+	1151	2	FSM	ENSG00000251661.3	ENST00000602429.1	1151	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTATAATAACGATTGAT	318490	False	NA	NA	False	ATTAAA	-17	NA	318652	325631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_318747_324574
transcript_21189.known	chr11	-	345	2	FSM	ENSG00000142089.17	ENST00000679793.1	345	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-320481	False	NA	-21	True	AATAAA	-18	NA	320494	319675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319991_320464
transcript_21190.known	chr11	-	651	2	FSM	ENSG00000142089.17	ENST00000680209.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272993	True	NA	-21	True	AATAAA	-18	NA	320860	319675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_320031_320564
transcript_21191.known	chr11	-	591	2	FSM	ENSG00000142089.17	ENST00000681198.1	591	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCGACTTCACCTGG	-272974	True	NA	-21	True	AATAAA	-18	NA	320841	319675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_319986_320560
transcript_21192.known	chr11	+	3750	20	FSM	ENSG00000182272.12	ENST00000329962.11	3750	20	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	42.3124507716666	202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCCTCTGTGCCTGTTC	367229	True	NA	26	True	AATGAA	-25	NA	369498	382117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_369955_372108_372213_372661_372755_372851_372948_373025_373117_373190_373292_373448_373517_373749_373829_375460_375528_375638_375774_375846_375957_376073_376175_376250_376352_376420_377328_379417_379702_379865_380020_380129_380203_380291_380446_380824_380952_381668
transcript_21197.known	chr11	-	1598	10	FSM	ENSG00000185187.13	ENST00000397632.7	1598	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	69.8889772124508	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413768	True	NA	-6	True	AATAAA	-17	NA	417325	405715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417293
transcript_21198.known	chr11	-	1639	10	FSM	ENSG00000185187.13	ENST00000332725.7	1639	10	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_9	73.4499073443179	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413840	True	NA	-6	True	AATAAA	-17	NA	417397	405715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_409867_410028_417324
transcript_21210.nnic	chr11	-	1516	9	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_8	69.0991135977879	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413846	True	NA	-6	True	AATAAA	-17	NA	417403	405715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_408694_408894_417293
transcript_21219.nnic	chr11	-	1473	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	71.9024282182005	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413795	True	NA	-6	True	AATAAA	-17	NA	417352	405715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406141_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
transcript_21221.nnic	chr11	-	1340	8	NIC	ENSG00000185187.13	novel	1598	10	NA	NA	29	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_7	64.4109890484852	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-413869	True	NA	-6	True	AATAAA	-17	NA	417426	405715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_406060_406348_406539_406842_406994_407061_407165_407424_407569_407816_407958_408072_408207_417293
transcript_2123.nic	chr1	+	1944	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	126	junction_2	93.8576049129744	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAAAAAAAAGTGCCTT	15753805	True	NA	-12	True	NA	NA	NA	15758766	15785329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_21233.known	chr11	-	608	3	FSM	ENSG00000185187.13	ENST00000526395.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	94.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGCCTCGGTCTCCTCC	-406213	True	NA	-6	True	AATAAA	-17	NA	407135	405715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_406060_406348_406539_407061
transcript_2124.nic	chr1	+	3204	9	NIC	ENSG00000162458.13	novel	3314	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_2	93.8576049129744	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753805	True	NA	20	True	AATAAA	-21	NA	15758766	15786589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_15758849_15764495_15764548_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_21241.nic	chr11	-	2024	11	NIC	ENSG00000023191.17	novel	2014	11	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	115	junction_10	133.515392371067	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-504697	False	NA	-4	True	ATTAAA	-15	NA	506878	494514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_506608
transcript_21242.known	chr11	-	1829	11	FSM	ENSG00000023191.17	ENST00000533410.5	1829	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	145.246170345383	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTATAATCATTAAAGCA	-505037	True	NA	-35	True	NA	NA	NA	507218	494545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_504823_504997_507112
transcript_21243.known	chr11	-	2014	11	FSM	ENSG00000023191.17	ENST00000397615.6	2014	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	142.986852542463	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-504619	False	NA	-4	True	ATTAAA	-15	NA	506800	494514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_506608
transcript_21244.known	chr11	-	1952	11	FSM	ENSG00000023191.17	ENST00000354420.7	1952	11	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_10	153.820057209715	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-505061	True	NA	-4	True	ATTAAA	-15	NA	507242	494514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_504823_504997_507112
transcript_21249.known	chr11	-	1725	10	FSM	ENSG00000023191.17	ENST00000438658.6	1725	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	129.179270591753	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACTTTATAATCATTAAAG	-504604	False	NA	-37	True	NA	NA	NA	506785	494547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_506608
transcript_2125.known	chr1	+	3314	9	FSM	ENSG00000162458.13	ENST00000375766.8	3314	9	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_4	48.7568905386716	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGTGTAGGCT	15753833	True	NA	20	True	AATAAA	-21	NA	15758794	15786589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15758849_15764495_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617_15774797_15777169_15777288_15784547
transcript_21250.known	chr11	-	1722	10	FSM	ENSG00000023191.17	ENST00000397604.7	1722	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_9	107.572657042623	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGAGGCTCTTGTCCTTCC	-505072	True	NA	-4	True	ATTAAA	-15	NA	507253	494514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502182_507112
transcript_21251.known	chr11	-	1864	10	FSM	ENSG00000023191.17	ENST00000397614.5	1864	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	136.678861244565	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGCTCTTGTCCTTCCTG	-504640	False	NA	-2	True	ATTAAA	-17	NA	506821	494512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_506608
transcript_21252.known	chr11	-	1791	10	FSM	ENSG00000023191.17	ENST00000356187.9	1791	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	113.440145745087	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATATTTTGGACACTTT	NA	False	NA	-50	True	NA	NA	NA	507300	494560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_494779_494882_495054_497970_498142_498456_498628_498762_498934_499014_499186_499828_500000_500483_500655_502061_502250_507112
transcript_21260.known	chr11	-	1114	7	FSM	ENSG00000174775.18	ENST00000493230.5	1114	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	101.959142143638	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	-534631	True	NA	-5	True	AGTAAA	-18	NA	535538	532241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_532523_532630_532756_533276_533359_533452_533613_533765_533945_534211_534376_535415
transcript_21262.known	chr11	-	1070	6	FSM	ENSG00000174775.18	ENST00000311189.8	1070	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	39.700881602302	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTTCGGCTGAGGG	NA	False	NA	-5	True	AGTAAA	-18	NA	535576	532241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_532523_532630_532756_533452_533613_533765_533945_534211_534376_535415
transcript_21263.known	chr11	-	1151	5	FSM	ENSG00000174775.18	ENST00000451590.5	1151	5	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_1	40.5732362524855	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTGGTTTTCGGCTGAGG	-534643	True	NA	-6	True	AGTAAA	-17	NA	535550	532242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_532756_533452_533613_533765_533945_534211_534376_535415
transcript_21265.nic	chr11	+	1576	6	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	185.60775845853	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGGAGGCTGCGCT	557329	True	NA	12	True	AATAAA	-19	NA	560966	564025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563395_563479_563557
transcript_21269.nic	chr11	+	1489	5	NIC	ENSG00000099849.15	novel	2017	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_4	166.607885467645	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGAGTGTGTGTGGAGGCTG	557329	True	NA	8	True	AATAAA	-15	NA	560966	564021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_561034_561761_561893_562078_562777_563188_563318_563557
transcript_21272.known	chr11	+	1679	4	FSM	ENSG00000099849.15	ENST00000414138.6	1679	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	189.996491195671	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCCCAACGTGAAAACCT	557333	True	NA	-33	True	NA	NA	NA	560970	563980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_561034_561761_561893_562083_562777_563188
transcript_21274.known	chr11	+	2210	2	FSM	ENSG00000254815.6	ENST00000527620.5	2210	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTTTCACCCTTCATCTCT	NA	False	NA	10	True	ATTAAA	-14	NA	557594	560106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_559477_559778
transcript_21277.known	chr11	-	1965	2	FSM	ENSG00000247095.4	ENST00000500447.2	1992	2	27	0	7	0	multi-exon	FALSE	canonical	2	36	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTTGTTTTTTGTTGTTA	-567821	True	NA	-2	True	TATAAA	-16	NA	568420	565659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567556_568351
transcript_21278.known	chr11	-	659	2	FSM	ENSG00000247095.4	ENST00000528245.2	750	2	24	67	19	61	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGTTCACAATATAGTTT	-567809	True	NA	-29	True	NA	NA	NA	568408	567082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567685_568351
transcript_21279.known	chr11	-	367	2	FSM	ENSG00000247095.4	ENST00000534540.2	966	2	72	527	58	-382	multi-exon	FALSE	canonical	2	34	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGAGAGGGAGAGGCAGA	-567770	False	NA	NA	False	NA	NA	NA	568369	567525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567854_568330
transcript_21280.known	chr11	-	816	2	FSM	ENSG00000247095.4	ENST00000533920.1	816	2	0	0	0	0	multi-exon	FALSE	canonical	2	149	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGCCCGCCCTGCTGTGG	-567858	True	NA	-90	True	NA	NA	NA	568457	567143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_567854_568351
transcript_21281.known	chr11	+	5539	18	FSM	ENSG00000070047.13	ENST00000264555.10	5539	18	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_2	41.4630364421548	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTTGTGCTCTTGTAAA	NA	False	NA	5	True	NA	NA	NA	576469	612222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_576593_581491_581607_581961_582082_587258_587465_591383_591468_592558_592675_596922_597021_597394_597571_598372_598503_601573_601702_605118_605301_605604_605725_606441_606597_607065_609721_610195_610348_610500_610762_610953_611083_611633
transcript_21284.known	chr11	-	1923	11	FSM	ENSG00000185507.21	ENST00000525445.6	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	13.5262707351287	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-615107	True	NA	-3	True	AATAAA	-16	NA	615950	612554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_21285.known	chr11	-	1992	10	FSM	ENSG00000185507.21	ENST00000330243.9	1992	10	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	13.9186348131463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCGCCCAGTCTAATAA	-615127	True	NA	-39	True	NA	NA	NA	615970	612590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614173_614400_614475_614535_614796_615008_615096_615648_615912
transcript_21288.known	chr11	-	1604	9	FSM	ENSG00000185507.21	ENST00000532326.5	1604	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	28.9903001019306	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCGCCCAGTCTAATAA	-615140	True	NA	-39	True	NA	NA	NA	615983	612590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614475_614532_614796_615008_615096_615260_615344_615648_615912
transcript_21289.known	chr11	-	1596	9	FSM	ENSG00000185507.21	ENST00000469048.6	1596	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	21.2599241532043	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAGTCTAATAAAAAGAACT	-614769	False	NA	-31	True	NA	NA	NA	615612	612582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_613950_614038_614475_614535_614796_615008_615096_615260_615344
transcript_21290.known	chr11	-	806	2	FSM	ENSG00000185507.21	ENST00000531912.1	806	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCGCCCAGTCTAATAAAAA	-612748	False	NA	-36	True	NA	NA	NA	613591	612587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998
transcript_21291.known	chr11	-	1807	10	FSM	ENSG00000185507.21	ENST00000348655.11	1807	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	22.2299986393651	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTACTGGCATCTTGGCTGG	-615078	False	NA	-3	True	AATAAA	-16	NA	615921	612554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_612801_612998_613118_613205_613596_613784_613866_614173_614400_614475_614535_614796_615008_615096_615260_615344_615648_615912
transcript_21292.known	chr11	+	3030	21	FSM	ENSG00000177106.17	ENST00000318562.13	3030	21	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_12	67.0004477596978	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTGTCTCAGTTCTCT	705211	True	NA	17	True	ATTAAA	-20	NA	706230	727727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_706289_709329_709452_709552_709609_710421_710487_720061_720224_720596_720747_720829_720910_721063_721207_721284_721353_721564_721692_721902_721992_722090_722166_722400_722550_722672_722806_723240_723354_724723_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_21294.known	chr11	-	2267	12	FSM	ENSG00000177030.19	ENST00000683307.1	2267	12	0	0	0	0	multi-exon	FALSE	canonical	1	41	junction_11	173.405510507539	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTCTCCCTGCCCCACAC	NA	False	NA	-21	True	AATAAA	-9	NA	707118	644238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_644655_653961_654052_674535_674784_678693_678823_679687_679817_680962_681090_684897_684964_686857_686998_687910_688058_688330_688461_691500_691599_706571
transcript_21297.nic	chr11	+	965	6	NIC	ENSG00000177042.16	novel	1423	5	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	158	junction_1	54.872215191297	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695560	False	NA	26	True	AATAAA	-23	NA	695620	704129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944_703147_703799
transcript_2130.known	chr1	+	1543	6	FSM	ENSG00000162458.13	ENST00000441801.6	1543	6	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_3	48.1522585140095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATATTACAGTGCTGGGG	15759537	False	NA	NA	False	NA	NA	NA	15764498	15775242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15764686_15764963_15765234_15767375_15767564_15768527_15768631_15770408_15770579_15774617
transcript_21302.known	chr11	+	1597	6	FSM	ENSG00000177106.17	ENST00000527832.5	1597	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	73.2518941734615	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	724492	True	NA	12	True	ATTAAA	-15	NA	724561	727722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_724830_725727_725848_726097_726171_726303_726485_726618_726752_726900
transcript_21303.known	chr11	+	1423	5	FSM	ENSG00000177042.16	ENST00000397510.9	1423	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	52.4928566568824	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	694454	True	NA	26	True	AATAAA	-23	NA	695815	704129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614_700708_702944
transcript_21306.known	chr11	+	1572	5	FSM	ENSG00000177042.16	ENST00000397512.8	1572	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	118.014829576626	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	695582	False	NA	26	True	AATAAA	-23	NA	695642	704129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695823_698868_698889_700141_700236_700614_700708_702944
transcript_21309.nnic	chr11	+	1248	5	NNC	ENSG00000177106.17	novel	750	3	NA	NA	-161	0	intron_retention	FALSE	canonical	2	6	junction_1	115.923196557031	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCGTGTGTCTCAGTTC	725509	False	NA	14	True	ATTAAA	-17	NA	725919	727724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_725957_726097_726171_726303_726485_726618_726752_726900
transcript_21314.known	chr11	+	669	4	FSM	ENSG00000177042.16	ENST00000488769.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	57.4475606289964	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGCCTCCCCACTCCA	694443	True	NA	NA	False	NA	NA	NA	695804	701127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695847_698868_698889_700141_700236_700614
transcript_21320.known	chr11	-	567	2	FSM	ENSG00000177030.19	ENST00000526857.2	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATACGCTGTTCTAACAAT	-706464	False	NA	NA	False	NA	NA	NA	706624	697485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_698000_706571
transcript_21321.known	chr11	+	2047	5	FSM	ENSG00000177042.16	ENST00000492023.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	116.372247550694	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGAATTCTCCTAATTA	694440	True	NA	18	True	AATAAA	-15	NA	695801	704121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_695847_698868_700236_700614_700708_702944_703147_703781
transcript_21322.known	chr11	+	470	2	FSM	ENSG00000177042.16	ENST00000528024.1	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCCTAATTATGGCCACC	702991	False	NA	26	True	AATAAA	-23	NA	703006	704129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_703147_703799
transcript_21323.known	chr11	+	342	2	FSM	ENSG00000177106.17	ENST00000534027.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTATGTATTTTGTATCA	726547	False	NA	22	True	NA	NA	NA	726560	727051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_726752_726900
transcript_21324.known	chr11	+	491	2	FSM	ENSG00000177106.17	ENST00000534449.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGCCGTGTGTCTCAGT	726599	True	NA	12	True	ATTAAA	-15	NA	726626	727722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_726752_727356
transcript_21337.known	chr11	+	1231	8	FSM	ENSG00000177156.11	ENST00000528097.5	1231	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	728.903481754811	4934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	713333	True	NA	18	True	ATTAAA	-15	NA	747427	765012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763941_764287_764434_764812
transcript_21338.known	chr11	+	1199	8	FSM	ENSG00000177156.11	ENST00000319006.8	1199	8	0	0	0	0	multi-exon	FALSE	canonical	3	2011	junction_1	95.2401904531434	5161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGTTTCATTCACTGT	713369	True	NA	18	True	ATTAAA	-15	NA	747463	765012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_747579_755878_756003_758949_759058_760121_760254_763343_763520_763746_763945_764287_764434_764812
transcript_2134.nnic	chr1	-	1167	2	Genic_Genomic	ENSG00000233954.6	novel	2180	1	NA	NA	-19410	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11531	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGTAC	-15828728	False	NA	NA	False	AATAAA	-31	NA	15828758	15807168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_15807789_15828211
transcript_21345.nic	chr11	-	937	9	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	16.9921857040229	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-23	True	AATAAA	-21	NA	777506	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_767374_770313_770399_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_2135.nnic	chr1	-	1200	2	Genic_Genomic	ENSG00000233954.6	novel	2180	1	NA	NA	-19401	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11524	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGTAC	-15828719	False	NA	NA	False	AATAAA	-31	NA	15828749	15807168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_15807831_15828211
transcript_21351.known	chr11	-	790	8	FSM	ENSG00000177225.17	ENST00000397472.6	790	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	18.3992014023679	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	-774590	False	NA	-23	True	AATAAA	-21	NA	777471	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_767374_770313_770399_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_21353.nnic	chr11	-	846	8	NIC	ENSG00000177225.17	novel	4363	8	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	16.378183597676	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	NA	False	NA	-29	True	AATAAA	-15	NA	777506	767227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_767374_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_21355.known	chr11	-	4363	8	FSM	ENSG00000177225.17	ENST00000319863.13	4363	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	10.1900311429297	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	-774606	True	NA	-23	True	AATAAA	-21	NA	777487	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_770904_770992_771105_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_21359.nic	chr11	-	1157	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	16.60739460468	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	-774323	False	NA	-23	True	AATAAA	-21	NA	777204	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_776679
transcript_2136.nnic	chr1	-	1231	2	Genic_Genomic	ENSG00000233954.6	novel	2180	1	NA	NA	-19416	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGTGTGGTGGTAC	-15828734	False	NA	NA	False	AATAAA	-31	NA	15828764	15807168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_15807847_15828211
transcript_21362.nic	chr11	-	740	7	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	14.243907079481	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-23	True	AATAAA	-21	NA	777506	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_767374_771332_771427_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_21363.known	chr11	-	756	7	FSM	ENSG00000177225.17	ENST00000526325.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	19.3426701592332	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAAATGGTGTCCTGGTGT	-774606	True	NA	-29	True	AATAAA	-15	NA	777487	767227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_767374_771332_771468_772426_772522_773521_773630_774007_774114_775065_775143_777398
transcript_21366.nic	chr11	-	632	6	NIC	ENSG00000177225.17	novel	790	8	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	20.6726872950761	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-23	True	AATAAA	-21	NA	777506	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_767374_771332_771427_772426_772522_774007_774114_775065_775143_777398
transcript_2137.known	chr1	+	438	1	FSM	ENSG00000178715.8	ENST00000321418.6	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	389	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGCCCATCATGACTATCA	NA	False	NA	NA	False	NA	NA	NA	15828231	15828669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_15828200_15828700
transcript_21370.nnic	chr11	-	785	3	NNC	ENSG00000177225.17	novel	4363	8	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	25	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGTCCTGGTGTTCGCAG	NA	False	NA	-23	True	AATAAA	-21	NA	777506	767221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_767872_775115_775143_777398
transcript_21376.known	chr11	+	610	4	FSM	ENSG00000255284.3	ENST00000525941.1	610	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	5.43650214343336	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	776227	True	NA	NA	False	AATACA	-15	NA	777607	784297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_777696_778112_778219_783529_783672_784023
transcript_21379.nic	chr11	+	514	3	NIC	ENSG00000255284.3	novel	610	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	7.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAACCGGCTGTGGTGGCG	776217	True	NA	NA	False	AATACA	-15	NA	777597	784297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_777696_783529_783672_784023
transcript_21380.known	chr11	-	1605	2	FSM	ENSG00000184524.6	ENST00000330106.5	1605	2	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCTCTTGCATCCTCAT	-786159	False	3931	-24	True	AATAAA	-15	NA	790090	787114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_788659_790029
transcript_21384.known	chr11	-	2984	16	FSM	ENSG00000177595.19	ENST00000347755.10	2984	16	0	0	0	0	multi-exon	TRUE	canonical	2	60	junction_14	35.1185927331315	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGAGCTTGATTTATTT	-803636	True	NA	-6	True	NA	NA	NA	805231	799183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_799566_799814_800015_800130_800245_800332_800452_800542_800667_800761_800913_800984_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_802892_803173_803588_804093_804464_805178
transcript_21389.known	chr11	-	2640	10	FSM	ENSG00000177542.11	ENST00000628067.3	2640	10	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_9	32.3377240241444	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGCTGTCTGTCTGGGGG	-794350	True	NA	-3	True	AATAAA	-18	NA	798281	790474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_792069_792141_792218_792303_792459_792552_792728_792869_792989_793528_793620_794457_794514_794775_794902_794986_795170_798216
transcript_2139.known	chr1	-	2720	16	FSM	ENSG00000116809.12	ENST00000375743.9	2720	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	12.9690229221617	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-15974740	True	NA	0	True	AATAAA	-17	NA	15976101	15941868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15942253_15942330_15942421_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_21394.known	chr11	-	4496	10	FSM	ENSG00000177595.19	ENST00000527357.5	4496	10	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_1	34.906223577529	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	-803635	True	NA	-7	True	NA	NA	NA	805230	799184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_800245_800383_800452_800542_800667_800761_801121_801217_801366_801444_802091_802194_802397_802542_802598_802681_804464_805178
transcript_21395.known	chr11	-	3994	12	FSM	ENSG00000177595.19	ENST00000534525.5	3994	12	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_11	41.5920764863487	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCAGAGCTTGATTTATT	-808737	True	NA	-7	True	NA	NA	NA	809499	799184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_799566_799814_800245_800332_800452_800542_800667_800761_801121_801217_801366_801444_801625_801964_802091_802194_802397_802542_802598_802681_804464_809411
transcript_2140.known	chr1	-	2770	16	FSM	ENSG00000116809.12	ENST00000375733.6	2770	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	18.4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGCTGCCTATAGGTCCCT	-15974771	False	NA	-2	True	AATAAA	-15	NA	15976132	15941870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_15942253_15942330_15942442_15942528_15942739_15943063_15943195_15943398_15943520_15943598_15943716_15943807_15943896_15944299_15944601_15944696_15944840_15944936_15945203_15945714_15945841_15946153_15946295_15946934_15947124_15948290_15948498_15973038_15973126_15975982
transcript_21408.known	chr11	+	353	4	FSM	ENSG00000177600.9	ENST00000532004.5	353	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4123.6359630253	4721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCCATGAGCACTTTGT	675405	True	NA	32	True	AATAAA	-22	NA	809964	812880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810049_811596_811646_812534_812634_812759
transcript_21416.known	chr11	+	462	5	FSM	ENSG00000177600.9	ENST00000321153.9	462	5	0	0	0	0	multi-exon	FALSE	canonical	3	7240	junction_1	999.696078815957	190367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGTATTCCATGAGCACT	675407	True	NA	28	True	AATAAA	-18	NA	809966	812876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810040_810233_810358_811596_811646_812534_812634_812759
transcript_21417.known	chr11	+	637	4	FSM	ENSG00000177600.9	ENST00000530797.5	637	4	0	0	0	0	multi-exon	FALSE	canonical	3	7720	junction_3	816.163518474631	5299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCAAGTATTCCATGAGCA	675424	True	NA	26	True	AATAAA	-16	NA	809983	812874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810358_811596_811646_812534_812634_812759
transcript_21418.known	chr11	+	313	4	FSM	ENSG00000177600.9	ENST00000530398.1	313	4	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_1	4110.64409659714	988	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTCAAGTATTCCATGA	675709	False	NA	23	True	AATAAA	-13	NA	810268	812871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_810322_811596_811646_812534_812634_812759
transcript_21420.known	chr11	+	714	4	FSM	ENSG00000177685.17	ENST00000526531.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	123.060960503321	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCACTCAGGATGCAGGCT	827670	True	NA	NA	False	NA	NA	NA	830484	831780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_830714_830865_831033_831223_831296_831534
transcript_21422.known	chr11	+	1728	5	FSM	ENSG00000177685.17	ENST00000527763.5	1728	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	180.944742946569	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCGTCCTCCTGGGCCTT	829178	False	NA	4	True	AATAAA	-14	NA	829304	831985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_829541_829985_830133_830249_830714_830865_831296_831534
transcript_21424.known	chr11	-	536	3	FSM	ENSG00000255108.1	ENST00000532946.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGAGCCGAGCCCACCCC	-832864	False	84	NA	False	NA	NA	NA	832883	823633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_823864_830564_830699_832711
transcript_21431.known	chr11	+	1545	9	FSM	ENSG00000177697.19	ENST00000397420.9	1545	9	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_1	88.9634756515279	1263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGACGAGCTCGCTGTGCTG	828996	True	NA	7	True	AATAAA	-16	NA	832951	838831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_21436.known	chr11	+	1486	8	FSM	ENSG00000177697.19	ENST00000397421.5	1486	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	111.882226707647	1152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGAGCTCGCTGTGCTGGTA	828996	True	NA	10	True	AATAAA	-19	NA	832951	838834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_833027_836062_836154_836250_836443_836768_836844_837249_837355_837459_837619_837941_838029_838132
transcript_21439.known	chr11	+	1835	8	FSM	ENSG00000177697.19	ENST00000532045.6	1835	8	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	94.1949779847685	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCTCGCTGTGCTGGTAA	829036	True	NA	11	True	AATAAA	-20	NA	832991	838835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_833027_834529_834592_836062_836154_836250_836844_837249_837355_837459_837619_837941_838029_838132
transcript_2145.nnic	chr1	-	454	3	NNC	ENSG00000116809.12	novel	2720	16	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	22.5	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGCCTATAGGTCCCTGT	-15974747	True	NA	0	True	AATAAA	-17	NA	15976108	15941868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_15942155_15973083_15973126_15975982
transcript_21450.known	chr11	-	876	2	FSM	ENSG00000177700.6	ENST00000322028.5	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	3246	junction_1	0	14177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAACTGTGTTTGCACCAC	-794488	True	NA	-3	True	GGGGCT	-42	NA	842529	839720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_840481_842413
transcript_21451.known	chr11	+	1430	9	FSM	ENSG00000214063.12	ENST00000397408.5	1430	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	217.460341211909	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	838927	True	NA	19	True	AATAAA	-19	NA	842940	867116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_843051_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_21456.known	chr11	+	1462	9	FSM	ENSG00000214063.12	ENST00000397404.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	242.711763208955	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	844188	False	NA	19	True	AATAAA	-19	NA	844445	867116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_844588_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_21457.known	chr11	+	1025	8	FSM	ENSG00000214063.12	ENST00000397411.6	1025	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	241.372774617459	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACCCCCCCTGGGAGGGGT	842793	True	NA	NA	False	NA	NA	NA	842811	866817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_842916_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_2146.known	chr1	+	3039	2	FSM	ENSG00000183888.4	ENST00000329454.2	3039	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACCAAAAAAGTA	NA	False	NA	NA	False	NA	NA	NA	16004235	16008807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16004386_16005918
transcript_21476.known	chr11	+	2777	7	FSM	ENSG00000214063.12	ENST00000468468.5	2777	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	345.810360682782	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTTGCGTCTATTGCTCG	NA	False	NA	12	True	AATAAA	-12	NA	862296	867109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_862330_862549_864353_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_21477.known	chr11	+	1379	9	FSM	ENSG00000214063.12	ENST00000397397.7	1379	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	168.67850337254	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGCGTCTATTGCTCGTC	838838	True	NA	14	True	AATAAA	-14	NA	842851	867111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_842916_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_21478.known	chr11	+	1332	8	FSM	ENSG00000214063.12	ENST00000397396.5	1332	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	276.127669377624	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	842805	False	NA	19	True	AATAAA	-19	NA	842823	867116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_842916_847200_847301_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_21479.known	chr11	+	1426	9	FSM	ENSG00000214063.12	ENST00000397406.5	1426	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	235.108485597607	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCTATTGCTCGTCTGCCT	844015	False	NA	19	True	AATAAA	-19	NA	844080	867116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_844187_847200_847301_850287_850368_862549_862742_864436_864512_865512_865615_865693_865826_865917_866002_866561
transcript_2148.known	chr1	+	1777	14	FSM	ENSG00000184908.20	ENST00000684624.1	1777	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5.28254914258135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGTTGTCTGGTTCCCAGT	16048913	False	NA	-42	True	NA	NA	NA	16048999	16057252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16049032_16049119_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055674_16055759_16056421_16056509_16056868
transcript_21484.known	chr11	-	1477	14	FSM	ENSG00000177830.18	ENST00000436108.6	1477	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	255.784163820864	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGGGTCTGCTGCAGT	-903355	True	NA	-17	True	AATACA	-19	NA	910831	869766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_908541_908646_910774
transcript_2150.known	chr1	+	2129	13	FSM	ENSG00000184908.20	ENST00000375667.7	2129	13	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_2	3.8613109460677	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGTCCATCCCTCATC	16048702	True	NA	14	True	AATAAA	-14	NA	16048788	16057308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16049246_16049617_16049703_16049814_16049917_16050515_16050601_16050874_16051049_16051477_16051548_16051709_16051821_16052197_16052412_16053638_16053773_16055434_16055524_16055677_16055759_16056421_16056509_16056868
transcript_21503.known	chr11	-	1289	12	FSM	ENSG00000177830.18	ENST00000429789.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	194.016783801542	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTCTGCTGCAGTCCTCA	-903359	True	NA	-12	True	AATACA	-24	NA	910835	869761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_904705_904860_910774
transcript_21504.known	chr11	-	1431	14	FSM	ENSG00000177830.18	ENST00000528581.5	1431	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	274.488744770923	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGGGTCTGCTGCAGTCCTC	-903334	True	NA	-13	True	AATACA	-23	NA	910810	869762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_869957_870120_870164_870418_870500_883147_883304_884067_884170_893426_893520_899339_899402_900003_900111_900935_900981_902197_902331_902961_903112_903703_903779_904705_904860_910774
transcript_21505.known	chr11	+	4587	22	FSM	ENSG00000183020.15	ENST00000448903.7	4587	22	0	0	0	0	multi-exon	FALSE	canonical	2	112	junction_17	26.4050946777949	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGATCACGCGCTTTCT	918461	True	NA	9	True	AATAAA	-14	NA	925869	1012240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_926089_959436_959506_970168_970312_972061_972256_977094_977225_981197_981300_984644_984754_985434_985583_986784_986954_988551_988690_992502_992686_993283_993382_993753_993986_994071_994246_1000431_1000599_1003721_1003805_1006527_1006618_1008011_1008136_1009099_1009217_1009327_1009398_1009682_1009818_1010547
transcript_21506.nic	chr11	+	960	3	ISM	ENSG00000117983.17	ENST00000529681.5	17911	49	37255	0	798	0	3prime_fragment	TRUE	canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCCTGTCCTGACGTCT	NA	False	NA	NA	False	AATAAA	-17	NA	1260320	1262172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_1260394_1260625_1260729_1261388
transcript_21507.known	chr11	-	3627	6	FSM	ENSG00000078902.16	ENST00000317204.11	3627	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	15.1182009511714	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTGTTCCCGAGTAT	-1306373	True	NA	-1	True	AATAAA	-21	NA	1309632	1274370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1295644_1295795_1309465
transcript_21508.known	chr11	-	684	5	FSM	ENSG00000078902.16	ENST00000530541.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	120.412572018041	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGACATGTTCCCCAAC	-1306364	True	NA	NA	False	NA	NA	NA	1309623	1277154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1277254_1286001_1286093_1288623_1288777_1290226_1290410_1309465
transcript_21509.known	chr11	-	595	2	FSM	ENSG00000078902.16	ENST00000527085.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATGTTAGTCCTGAGAA	-1306385	True	NA	NA	False	AATAAA	-15	NA	1309644	1298148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1298565_1309465
transcript_21510.known	chr11	+	939	1	FSM	ENSG00000255153.1	ENST00000530897.1	939	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGACTGGCCTGGAA	1309595	True	NA	5	True	AATAAA	-16	NA	1309768	1310707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_1309800_1310700
transcript_21513.known	chr11	-	795	5	FSM	ENSG00000182208.15	ENST00000526462.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	38.3234588731237	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGTGGGGGCAGTGGGG	-1501236	True	NA	NA	False	NA	NA	NA	1501247	1470244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1470489_1471294_1471420_1480392_1480487_1480724_1480886_1501076
transcript_21515.known	chr11	+	318	1	FSM	ENSG00000230980.1	ENST00000445859.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGCCATCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	1792552	1792870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_1792600_1792900
transcript_21519.known	chr11	+	919	5	FSM	ENSG00000214026.11	ENST00000381514.7	919	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	667.760576479325	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCAGCTTTTCTTGTTTC	1928379	True	NA	NA	False	NA	NA	NA	1947340	1962838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_1947380_1950898_1951022_1952126_1952210_1952781_1952856_1962238
transcript_21520.known	chr11	-	989	5	FSM	ENSG00000130600.20	ENST00000428066.7	1243	5	0	254	0	9	multi-exon	FALSE	canonical	3	33	junction_2	8.8423695919137	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGAGTGTGCGTGAGTGTGA	NA	False	NA	NA	False	NA	NA	NA	2001470	1995429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_1995795_1995875_1995999_1996078_1996192_1996286_1996422_2001217
transcript_21521.known	chr11	-	934	4	FSM	ENSG00000167244.21	ENST00000418738.2	934	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATTATCCCCACACATAAA	-2137236	True	NA	NA	False	TTTAAA	-34	NA	2137305	2132715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2133224_2133516_2133666_2135366_2135530_2137191
transcript_21522.known	chr11	-	1005	4	FSM	ENSG00000167244.21	ENST00000381392.5	1005	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTGGCTTTTTAGAAAC	-2137218	True	NA	NA	False	ATTAAA	-41	NA	2137287	2132639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2133224_2133516_2133675_2135366_2135530_2137187
transcript_21524.known	chr11	+	1482	8	FSM	ENSG00000110651.12	ENST00000263645.10	1482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_1	133.55225225219	475	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGCCTGTGCAGTCCCTC	2371670	True	NA	30	True	AATAAA	-22	NA	2377309	2397397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2377616_2390411_2390527_2394094_2394193_2394971_2395047_2395415_2395521_2395868_2395971_2396627_2396715_2396803
transcript_21525.known	chr11	-	435	1	FSM	ENSG00000236264.5	ENST00000453533.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATAGAACCTGTTGTGCA	-2335685	False	NA	NA	False	TATAAA	-28	NA	2335749	2335314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2335300_2335700
transcript_21526.known	chr11	+	992	6	FSM	ENSG00000184281.15	ENST00000380992.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	116.466991031794	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCACTGCCTAGCTGGAA	2400573	False	NA	NA	False	GGGGCT	-16	NA	2400627	2403701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2401975_2402148_2402293_2402451_2402610_2402653_2402844_2403150_2403556
transcript_21532.known	chr11	+	851	4	FSM	ENSG00000184281.15	ENST00000440813.1	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	124.980887427727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCACCATGGAGGCCTGC	2399009	False	NA	NA	False	NA	NA	NA	2402099	2403448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2402148_2402293_2402451_2402610_2402653_2402844
transcript_21533.known	chr11	+	863	4	FSM	ENSG00000184281.15	ENST00000435795.5	863	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	138.348191973087	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGCATGAGTGACAACG	2397672	True	NA	NA	False	NA	NA	NA	2400762	2402971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2401838_2402148_2402293_2402451_2402610
transcript_21535.known	chr11	+	979	3	FSM	ENSG00000184281.15	ENST00000485682.6	979	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	154.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCCACACCAGCATGAGT	2397927	False	NA	NA	False	NA	NA	NA	2401017	2402964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2401486_2402293_2402451_2402610
transcript_21536.known	chr11	+	1472	3	FSM	ENSG00000184281.15	ENST00000333256.11	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	62	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTGTCTATCTGGGC	2397659	True	NA	13	True	AATAAA	-19	NA	2400749	2403876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2400799_2402293_2402451_2402610
transcript_21537.known	chr11	+	1423	2	FSM	ENSG00000184281.15	ENST00000451491.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	0	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACTTTGTGTCTATCTGGG	2399202	False	NA	12	True	AATAAA	-18	NA	2402292	2403875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2402451_2402610
transcript_21540.known	chr11	-	775	4	FSM	ENSG00000129757.15	ENST00000647251.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.2234187935065	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAAAAAAGGAA	-2885714	False	NA	-65	True	TATAAA	-39	NA	2885728	2883631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2883911_2883998_2884135_2885201_2885467_2885633
transcript_21542.known	chr11	-	1930	3	FSM	ENSG00000129757.15	ENST00000430149.3	1930	3	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	36.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTGTTTGTGCTTG	-2885751	False	NA	-6	True	AATAAA	-21	NA	2885765	2883217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2883916_2883998_2884135_2884669
transcript_21544.known	chr11	+	1543	11	FSM	ENSG00000110628.16	ENST00000649076.2	1543	11	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_3	12.5857061780418	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTCCGGCCTGGTTTCT	2901600	True	NA	8	True	AATAAA	-21	NA	2902277	2925246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2909195_2909357_2909577_2909711_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_21547.known	chr11	+	1225	9	FSM	ENSG00000110628.16	ENST00000449793.6	1225	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	27.8702350187436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTACTAAATCCCTCCGAC	2901605	True	NA	-11	True	AATAAA	-2	NA	2902282	2925227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_2902365_2903213_2903490_2908232_2908331_2916621_2916741_2917987_2918096_2919306_2919408_2922101_2922204_2922435_2922557_2925009
transcript_21556.nic	chr11	+	620	4	ISM	ENSG00000110628.16	ENST00000449603.5	682	6	2294	-57	2294	0	3prime_fragment	FALSE	canonical	3	82	junction_2	6.94422221866655	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCGACCTCTTCCGGCCTG	NA	False	NA	2	True	AATAAA	-15	NA	2919241	2925240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_2919408_2922101_2922204_2922435_2922557_2925009
transcript_21558.nnic	chr11	-	704	2	NNC	ENSG00000254827.6	novel	697	3	NA	NA	-3571	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGATGTTTGCTTGCTTC	NA	False	NA	NA	False	AATAGA	-19	NA	2893001	2888096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_2888636_2892836
transcript_21559.known	chr11	-	920	2	FSM	ENSG00000181649.8	ENST00000314222.5	920	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCCTGGTCCACACCCTC	NA	False	NA	-2	True	AATAAA	-18	NA	2929420	2928272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2928668_2928895
transcript_21567.known	chr11	-	1941	16	FSM	ENSG00000205531.13	ENST00000526115.5	1941	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	564.372863352668	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCTGTGTAGAGTAGGG	-2977383	True	NA	NA	False	NA	NA	NA	2992377	2945111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2989128_2989272_2992253
transcript_21569.known	chr11	-	2463	16	FSM	ENSG00000205531.13	ENST00000380542.9	2463	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	509.580699093764	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGCACTGTGCCATGTGG	-2977335	True	NA	-10	True	ATTAAA	-16	NA	2992329	2944436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2945647_2949226_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_21573.known	chr11	-	2479	15	FSM	ENSG00000205531.13	ENST00000620138.4	2479	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	407.952678328139	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGCCATGTGGGTCTTT	-2977383	True	NA	-4	True	ATTAAA	-22	NA	2992377	2944430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_2945647_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_21577.nic	chr11	-	1444	15	ISM	ENSG00000205531.13	ENST00000380542.9	2463	16	-86	4685	-38	-3525	5prime_fragment	FALSE	canonical	0	0	junction_5	474.015741794919	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTGTCACAGGTTTG	NA	False	NA	NA	False	AATAAA	-24	NA	2992415	2949121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_2949265_2951258_2951316_2951779_2951810_2954526_2954647_2955743_2955767_2958398_2958545_2959769_2959910_2964679_2964752_2969802_2969935_2971447_2971535_2972101_2972244_2976023_2976124_2978283_2978343_2979206_2979238_2992253
transcript_2158.known	chr1	+	904	2	FSM	ENSG00000227959.2	ENST00000424774.2	1758	2	35	819	35	-819	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGAGAGCCTTGGTCC	16155160	True	NA	NA	False	ATTAAA	-18	NA	16155210	16157329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16155756_16156970
transcript_21589.known	chr11	-	2737	23	FSM	ENSG00000110619.18	ENST00000380525.9	2737	23	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_21	152.40881978123	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049797	True	NA	-9	True	AATAAA	-17	NA	3057423	3000928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3047752_3048002_3057342
transcript_21590.known	chr11	-	2805	23	FSM	ENSG00000110619.18	ENST00000531387.5	2805	23	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_20	182.198607691245	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTGTTCTGCATGTT	-3049811	True	NA	-2	True	AATAAA	-24	NA	3057437	3000921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3047752_3048002_3057342
transcript_2160.nic	chr1	-	1966	10	ISM	ENSG00000142632.17	ENST00000270747.8	3322	16	6101	250	-8	-250	3prime_fragment	FALSE	canonical	3	180	junction_3	21.8428732338745	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGAGTCTGTGATCCAT	-16206535	False	199	-7	True	AATAAA	-17	NA	16206551	16198103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_16198745_16199149_16199255_16201781_16201862_16202415_16202575_16204758_16204920_16205086_16205177_16205350_16205426_16205537_16205668_16205930_16206084_16206179
transcript_21601.known	chr11	-	2491	22	FSM	ENSG00000110619.18	ENST00000278224.13	2491	22	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	94.7829600920414	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049792	True	NA	-9	True	AATAAA	-17	NA	3057418	3000928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3001249_3001961_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_21603.nic	chr11	-	2576	22	NIC	ENSG00000110619.18	novel	2805	23	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_20	124.572629963626	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCCTCTCTGTCTTGTTCT	-3049838	True	NA	-9	True	AATAAA	-17	NA	3057464	3000928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_3001249_3001969_3002054_3002540_3002601_3005365_3005434_3006878_3006960_3012194_3012277_3015780_3015850_3017105_3017296_3017856_3017955_3018407_3018512_3018619_3018750_3019138_3019268_3020219_3020333_3026675_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3041032_3042164_3042257_3057342
transcript_21629.nic	chr11	-	1574	9	ISM	ENSG00000110619.18	ENST00000278224.13	2491	22	-46	25174	-23	2981	5prime_fragment	FALSE	canonical	3	522	junction_8	37.5464295905749	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTTTCTCTGCCTGGT	-3049838	True	NA	NA	False	NA	NA	NA	3057464	3026102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_21630.nic	chr11	-	1383	9	ISM	ENSG00000110619.18	ENST00000278224.13	2491	22	-46	25365	-23	2790	5prime_fragment	FALSE	canonical	3	522	junction_8	37.5464295905749	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACCCTACTGTGCTAGTG	-3049838	True	NA	-31	True	AATATA	-24	NA	3057464	3026293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_3026798_3028995_3029085_3029302_3029444_3038049_3038200_3039193_3039293_3039834_3039932_3040895_3040985_3042164_3042257_3057342
transcript_21641.known	chr11	+	293	2	FSM	ENSG00000234791.1	ENST00000455154.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGGTGGCTGTGAGCTC	3189475	False	NA	NA	False	AATACA	-14	NA	3189545	3189929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3189619_3189709
transcript_2165.known	chr1	-	355	2	FSM	ENSG00000237276.9	ENST00000475369.2	998	2	93	550	93	12	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCCACCCGCAACATAA	-16217298	False	NA	NA	False	NA	NA	NA	16217328	16216456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16216610_16217126
transcript_21652.known	chr11	-	3187	6	FSM	ENSG00000005801.18	ENST00000399602.9	3187	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	175.455521429221	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	-3372661	True	NA	-14	True	AATAAA	-15	NA	3379146	3357926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3360719_3360789_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_21653.known	chr11	-	764	6	FSM	ENSG00000005801.18	ENST00000533036.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	179.783647754739	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATCTTTGATAACTTT	-3372667	True	NA	-28	True	AATAAA	-5	NA	3379152	3360343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3361742_3361890_3361975_3362033_3370974_3371071_3371576_3371704_3379037
transcript_21657.known	chr11	-	560	5	FSM	ENSG00000005801.18	ENST00000427810.6	560	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	199.184587757186	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGGCCTTGATAATTTAT	-3372615	True	NA	NA	False	AAAAAG	-22	NA	3379100	3360477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3377616_3377803_3379037
transcript_21660.known	chr11	-	2021	5	FSM	ENSG00000005801.18	ENST00000005082.13	2021	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	161.001552787543	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATATAAGTCTCCAGAGCA	-3372631	True	NA	14	True	AATAAA	-40	NA	3379116	3358993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3379037
transcript_2167.known	chr1	-	1574	5	FSM	ENSG00000132881.12	ENST00000375599.8	1574	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCAGAGACGTGTTCGTTC	-16236933	True	NA	NA	False	GATAAA	-22	NA	16237183	16231691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16232298_16232509_16232647_16232892_16233018_16233611_16233765_16236630
transcript_21670.known	chr11	-	2970	4	FSM	ENSG00000005801.18	ENST00000354599.10	2970	4	0	0	0	0	multi-exon	FALSE	canonical	3	340	junction_3	40.2326567189723	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGTCTCTTCATCCTT	-3372660	True	NA	-14	True	AATAAA	-15	NA	3379145	3357926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3370974_3371071_3371576_3371704_3379037
transcript_21676.known	chr11	-	2008	6	FSM	ENSG00000005801.18	ENST00000526601.5	2008	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	138.743792653942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAATAAACAAATATAA	-3372661	True	NA	-55	True	NA	NA	NA	3379146	3359116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3360566_3361742_3361890_3370974_3371071_3371576_3371704_3373576_3373657_3379037
transcript_2168.known	chr1	-	336	4	FSM	ENSG00000132881.12	ENST00000434014.1	336	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGACGTGCCCGAGCGG	-16236409	False	NA	NA	False	NA	NA	NA	16236659	16232280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16232298_16232509_16232647_16233611_16233765_16236630
transcript_21686.nnic	chr11	+	1753	13	NIC	ENSG00000223756.8	novel	1600	12	NA	NA	-39	0	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	37.0347997009419	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	3380868	False	NA	14	True	AATGAA	-18	NA	3380878	3408978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3403592_3403653_3404853_3404964_3406498_3406716_3407621_3407698_3408685
transcript_21705.nnic	chr11	+	930	6	NNC	ENSG00000223756.8	novel	2337	9	NA	NA	-6	3	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_5	26.4832022232962	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCGGTGTGCAGCTGGAA	3374659	True	NA	NA	False	AATAAA	-21	NA	3380954	3398093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3397816
transcript_21706.nnic	chr11	+	876	6	NNC	ENSG00000223756.8	novel	2337	9	NA	NA	-6	-6	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_5	27.1632104140877	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGACAGCGGTGTG	3374659	True	NA	NA	False	AATAAA	-12	NA	3380954	3398084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116_3397407_3397861
transcript_21711.nnic	chr11	+	965	5	NNC	ENSG00000223756.8	novel	674	6	NA	NA	-1	-5946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.158785735783	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGACAACAAATCTAGGAA	3374664	True	NA	NA	False	NA	NA	NA	3380959	3391293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3390686
transcript_21712.nnic	chr11	+	872	5	NNC	ENSG00000223756.8	novel	674	6	NA	NA	-1	-5947	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	32.158785735783	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGACAACAAATCTAGGA	3374664	True	NA	NA	False	NA	NA	NA	3380959	3391292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3390778
transcript_21713.nnic	chr11	+	1327	5	NIC	ENSG00000223756.8	novel	1244	4	NA	NA	-6	-10	combination_of_known_splicesites	FALSE	canonical	3	45	junction_4	15.7955689989313	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGACAGCGG	3374659	True	NA	NA	False	AATAAA	-8	NA	3380954	3398080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3381045_3383461_3383547_3384166_3384285_3384898_3384969_3397116
transcript_21717.known	chr11	+	2337	9	FSM	ENSG00000223756.8	ENST00000529482.5	2337	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	59.7364001258864	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGTGCTTGGCTCTGA	3374665	True	NA	14	True	AATGAA	-18	NA	3380960	3408978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3381045_3383461_3383547_3384166_3384285_3397116_3397407_3401758_3401868_3402612_3402730_3402914_3402957_3406498_3407698_3408685
transcript_21718.nnic	chr11	+	1191	2	Antisense	novelGene_ENSG00000166492.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	0	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTAGAAGTCTCTATAAT	3409825	True	NA	21	True	AATAAA	-17	NA	3409836	3411811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_3410849_3411632
transcript_2172.known	chr1	-	6227	10	FSM	ENSG00000037637.11	ENST00000375592.8	6227	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_3	17.2240142436851	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTTTTATTAGCAAAAAAA	-16349851	True	NA	0	True	AATAAA	-18	NA	16352480	16246839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16251786_16252287_16252405_16253095_16253153_16253634_16253732_16255710_16255822_16256605_16256760_16294782_16294918_16305802_16305920_16315168_16315436_16352254
transcript_21725.nnic	chr11	+	443	2	NIC	ENSG00000254757.1	novel	450	3	NA	NA	-135	-10503	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGCCTGATGTT	3469131	True	NA	NA	False	GATAAA	-17	NA	3469183	3520825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3469409_3520607
transcript_21727.known	chr11	-	1217	2	FSM	ENSG00000287906.1	ENST00000659225.1	1217	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCTCCAATTAGCAG	-3477033	True	NA	NA	False	AAAAAG	-9	NA	3477065	3475279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3476374_3476942
transcript_21728.nic	chr11	-	606	2	ISM	ENSG00000255367.3	ENST00000527970.1	983	5	-47	26603	-47	-143	5prime_fragment	FALSE	canonical	2	7	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTATTGCTCATGACCC	-3580741	True	NA	-3	True	TTTAAA	-10	NA	3581258	3508122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_3508397_3580926
transcript_21731.known	chr11	-	1241	5	FSM	ENSG00000167311.14	ENST00000359918.8	1241	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	12.2754836971909	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACATGGAATTTTATGAT	NA	False	NA	-15	True	ATTAAA	-16	NA	3642316	3638513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805_3641865_3642177
transcript_21732.nnic	chr11	-	623	4	NNC	ENSG00000167311.14	novel	1232	4	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.8162545173751	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3641562	True	NA	-13	True	ATTAAA	-18	NA	3642027	3638511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_3638794_3639002_3639036_3639641_3639728_3641805
transcript_21733.nnic	chr11	-	672	4	NNC	ENSG00000167311.14	novel	1232	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	12.4721912892465	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3642005	False	NA	-13	True	ATTAAA	-18	NA	3642029	3638511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_3638794_3639002_3639036_3639641_3639775_3641805
transcript_21738.known	chr11	-	1232	4	FSM	ENSG00000167311.14	ENST00000397068.8	1232	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	4.32049379893857	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3641527	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3638794_3639002_3639036_3639641_3640372_3641805
transcript_21739.known	chr11	-	1154	4	FSM	ENSG00000167311.14	ENST00000397067.7	1154	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.6249183003395	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATGGAATTTTATGATTG	-3641527	True	NA	-13	True	ATTAAA	-18	NA	3641992	3638511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3638920_3639002_3639036_3639845_3640372_3641805
transcript_21744.known	chr11	+	1843	7	FSM	ENSG00000148985.20	ENST00000300730.10	1843	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	82.8440636913043	1019	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3797805	False	NA	18	True	AATAAA	-18	NA	3797818	3826352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_21745.known	chr11	+	1837	7	FSM	ENSG00000148985.20	ENST00000396986.6	1837	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	79.5089093540256	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	3797805	False	NA	0	True	NA	NA	NA	3797818	3826334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21746.known	chr11	+	830	7	FSM	ENSG00000148985.20	ENST00000464261.5	830	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	85.9217990707571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTTGTCTTAACCAAC	3797458	True	NA	NA	False	NA	NA	NA	3797924	3825354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_21750.known	chr11	+	1696	7	FSM	ENSG00000148985.20	ENST00000532523.5	1696	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	86.4310900853005	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTGGGCCAACA	3797446	True	NA	0	True	NA	NA	NA	3797912	3826334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21752.known	chr11	+	1772	7	FSM	ENSG00000148985.20	ENST00000493547.6	1772	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	89.4197343369398	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTATTTGAAAGGAAAATAA	3807980	True	NA	-20	True	NA	NA	NA	3808041	3826314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808088_3808293_3808316_3811249_3811425_3823882_3824136_3824269_3824450_3825019_3825129_3825327
transcript_21755.known	chr11	+	1474	6	FSM	ENSG00000148985.20	ENST00000477358.6	1474	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	87.5922370989576	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATTTGAAAGGAAAATAAATT	3797445	True	NA	-17	True	NA	NA	NA	3797911	3826317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3811249_3811425_3824269_3824377_3825019_3825129_3825327
transcript_21757.known	chr11	+	863	6	FSM	ENSG00000148985.20	ENST00000464229.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	92.4705358479121	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAAACATCACCTTTAC	3797457	True	NA	NA	False	NA	NA	NA	3797923	3825652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_21758.known	chr11	+	1566	6	FSM	ENSG00000148985.20	ENST00000396993.8	1566	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	89.6758607430116	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGGAAAATAAATTTTTT	3797435	True	NA	-13	True	NA	NA	NA	3797901	3826321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21759.known	chr11	+	810	6	FSM	ENSG00000148985.20	ENST00000490830.5	810	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	95.514606212872	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGATACCATTCTGGCCTT	3797458	True	NA	NA	False	AAGAAA	-1	NA	3797924	3825509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3823882_3824136_3824269_3824456_3825019_3825129_3825327
transcript_21764.known	chr11	+	894	6	FSM	ENSG00000148985.20	ENST00000479072.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	85.7997668994503	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAAGGGTGTAGGCCAA	3805459	True	NA	NA	False	NA	NA	NA	3808593	3825578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_21765.nic	chr11	+	1726	6	NIC	ENSG00000148985.20	novel	894	6	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	80.804455322711	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805413	True	NA	18	True	AATAAA	-18	NA	3808547	3826352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3823612_3823741_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21772.known	chr11	+	699	5	FSM	ENSG00000148985.20	ENST00000464441.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	91.6255968602661	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCACCTTTCACTGAGGT	3797505	True	NA	NA	False	NA	NA	NA	3797971	3825777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3797983_3808293_3808316_3824269_3824377_3825019_3825129_3825327
transcript_21778.nic	chr11	+	1588	5	NIC	ENSG00000148985.20	novel	894	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	74.6537842309417	1064	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805411	True	NA	18	True	AATAAA	-18	NA	3808545	3826352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3823882_3824136_3824269_3824365_3825019_3825129_3825327
transcript_21781.known	chr11	+	1530	5	FSM	ENSG00000148985.20	ENST00000496834.6	1530	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	53.1718910703766	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATTTTTTTTTTGGGCC	3805459	True	NA	-4	True	NA	NA	NA	3808593	3826330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21789.nnic	chr11	+	1324	4	NIC	ENSG00000148985.20	novel	894	6	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	93.09970760188	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805422	True	NA	18	True	AATAAA	-18	NA	3808556	3826352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3824269_3824365_3825019_3825129_3825327
transcript_21790.nnic	chr11	+	1336	4	NIC	ENSG00000148985.20	novel	1530	5	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	86.4754300365138	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGCCTAGGCTTGCTAG	3805422	True	NA	18	True	AATAAA	-18	NA	3808556	3826352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_3808652_3824269_3824377_3825019_3825129_3825327
transcript_21793.known	chr11	+	931	6	FSM	ENSG00000148985.20	ENST00000463452.6	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	42.7859790118212	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTCTTGGCCTTACTGA	3805444	True	NA	NA	False	AAGAAA	-33	NA	3808578	3825541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3811249_3811425_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21794.known	chr11	+	1963	7	FSM	ENSG00000148985.20	ENST00000278243.9	1963	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	79.4138247130533	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGGGGCTCATCTTGTT	3805425	True	NA	37	True	AATAAA	-37	NA	3808559	3826371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_3808652_3811249_3811425_3817352_3817536_3823882_3824136_3824269_3824377_3825019_3825129_3825327
transcript_21796.known	chr11	-	1295	2	FSM	ENSG00000177105.10	ENST00000351018.5	1295	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	1527	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCTCCTCCCTGTGT	-3836449	True	NA	-8	True	AATAAA	-18	NA	3840959	3826977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3828207_3840893
transcript_21797.known	chr11	-	494	2	FSM	ENSG00000228661.1	ENST00000415809.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTCCCGGCTCTGTTAAG	-3855498	False	NA	NA	False	TATAAA	-28	NA	3855509	3854317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_3854659_3855356
transcript_21798.known	chr11	+	3142	19	FSM	ENSG00000167325.15	ENST00000300738.10	3142	19	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_7	62.2585459451944	547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTTCTTTGAGAA	4083452	True	NA	15	True	TATAAA	-19	NA	4094798	4138932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683_4126834_4127034_4127257_4129073_4129151_4132285_4132422_4133562_4133659_4135081_4135271_4138194
transcript_21810.nic	chr11	+	1807	13	ISM	ENSG00000167325.15	ENST00000300738.10	3142	19	-7	11983	-7	0	5prime_fragment	FALSE	canonical	3	695	junction_7	51.8316586010262	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGTCTGTCTCATTTGGT	4083445	True	NA	8	True	AATAAA	-18	NA	4094791	4126949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434_4107536_4109643_4109704_4111600_4111641_4111899_4112063_4118319_4118462_4119844_4119929_4121603_4121766_4122140_4122221_4123182_4123385_4126683
transcript_21814.known	chr11	+	583	4	FSM	ENSG00000167325.15	ENST00000526350.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_1	52.550504807809	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTCTTTTTTAATAATGCA	4083505	True	NA	NA	False	AATAAA	-39	NA	4094851	4107570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4095032_4101992_4102082_4106045_4106224_4107434
transcript_21815.known	chr11	+	639	4	FSM	ENSG00000167325.15	ENST00000531591.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	718	junction_3	50.5327176743499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGTCTGTCTCATTTGGT	4121653	False	NA	8	True	AATAAA	-18	NA	4121674	4126949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4121766_4122140_4122221_4123182_4123385_4126683
transcript_21816.nnic	chr11	+	636	3	NNC	ENSG00000254480.2	novel	653	3	NA	NA	-3898	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGATCTTTGTCTTATTA	NA	False	NA	NA	False	ATTAAA	-28	NA	4175776	4202663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_4175928_4180631_4180712_4202258
transcript_21819.known	chr11	+	462	2	FSM	ENSG00000254480.2	ENST00000525365.1	462	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATCAACTTGATCTTTG	4187110	True	NA	NA	False	ATTAAA	-20	NA	4187139	4202655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4187205_4202258
transcript_21821.known	chr11	-	1935	7	FSM	ENSG00000132109.10	ENST00000254436.8	1935	7	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	11.8988794990677	234	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCGTCTATCCCATTCAG	-4392184	True	NA	-14	True	AATAAA	-23	NA	4393702	4384896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_4385854_4386156_4386258_4386967_4386991_4388299_4388531_4389653_4389750_4390001_4390459_4393632
transcript_21829.nnic	chr11	+	902	2	FSM	ENSG00000225101.7	ENST00000687315.1	902	2	-3	3	-3	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTCTGACCATGAATTG	4393646	True	NA	NA	False	AATAAA	-24	NA	4393771	4410906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4394166_4410398
transcript_21830.nnic	chr11	+	700	2	FSM	ENSG00000225101.7	ENST00000690302.1	1622	2	-4	926	0	-87	multi-exon	FALSE	canonical	2	7	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTGCTATTATCAAAAAA	4393657	True	NA	NA	False	AATAAA	-18	NA	4393782	4519979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4394166_4519662
transcript_21831.nnic	chr11	+	787	2	FSM	ENSG00000225101.7	ENST00000690302.1	1622	2	-4	839	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTCTACTACTTTTT	4393657	True	NA	NA	False	AATACA	-21	NA	4393782	4520066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4394166_4519662
transcript_21832.known	chr11	+	2160	3	FSM	ENSG00000225101.7	ENST00000641797.3	2200	3	0	40	0	-40	multi-exon	FALSE	canonical	1	1	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGCTATTCCATCTCATTA	4393657	True	NA	NA	False	NA	NA	NA	4393782	4476361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_4394166_4469366_4469544_4474761
transcript_21833.known	chr11	-	3324	7	FSM	ENSG00000167333.13	ENST00000300747.10	3324	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCAGACTGCTTCTTGAG	-4607415	True	NA	0	True	AATAAA	-19	NA	4608231	4598671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_4600827_4601026_4601128_4601663_4601687_4602151_4602413_4603244_4603341_4605078_4605562_4608026
transcript_21836.nnic	chr11	-	2220	3	NNC	ENSG00000182070.7	novel	6178	2	NA	NA	-11080	-4106	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	25	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTCAGAGTCATACAAG	-5165483	True	NA	NA	False	AATAAA	-18	NA	5165837	5150929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5152691_5163485_5163665_5165557
transcript_21838.known	chr11	-	680	2	FSM	ENSG00000244734.4	ENST00000485743.1	680	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTCTGCCTAGTACATTA	NA	False	NA	NA	False	NA	NA	NA	5227072	5226262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5226800_5226929
transcript_21839.known	chr11	-	587	3	FSM	ENSG00000213934.9	ENST00000330597.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTTCAGCTCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	5249857	5248268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5248488_5249367_5249591_5249712
transcript_2184.known	chr1	+	791	5	FSM	ENSG00000055070.17	ENST00000472351.5	791	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	311.87096690779	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGTTAGGGGAAGGTT	16353656	True	NA	NA	False	NA	NA	NA	16367246	16395390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16387054_16387126_16391374_16391425_16393227_16393483_16395037
transcript_21844.known	chr11	+	2590	9	FSM	ENSG00000121236.21	ENST00000380107.5	2590	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	79.0185895849831	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGTCTTTCAAATTAATTG	5592600	True	NA	NA	False	AATAAA	-7	NA	5596128	5612423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596182_5603245_5603562_5603639_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_21846.known	chr11	+	3217	8	FSM	ENSG00000121236.21	ENST00000278302.9	3217	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.5893221772681	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5592580	True	NA	15	True	AATAAA	-18	NA	5596108	5612952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596182_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_21852.known	chr11	+	3422	8	FSM	ENSG00000121236.21	ENST00000380097.8	3422	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	78.808991510215	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTCATTTTACTTTTT	5596231	True	NA	15	True	AATAAA	-18	NA	5596636	5612952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5596915_5603245_5603736_5604533_5604630_5605336_5605568_5608371_5608395_5610144_5610246_5610534_5610562_5610776
transcript_21854.known	chr11	+	2293	8	FSM	ENSG00000258659.7	ENST00000429814.3	2293	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.18157963590287	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGAGCTGTAGTAATGTC	5624900	True	NA	15	True	AATAAA	-26	NA	5625000	5644398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5625061_5632254_5632755_5633803_5633900_5634630_5634862_5641166_5641190_5642405_5642507_5642816_5642844_5643143
transcript_2186.known	chr1	+	3480	4	FSM	ENSG00000055070.17	ENST00000401088.9	3480	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	284.465580811926	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353651	True	NA	20	True	TATAAA	-33	NA	16367241	16398145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16391374_16391425_16393227_16393483_16395037
transcript_21864.known	chr11	-	3364	8	FSM	ENSG00000132256.20	ENST00000380034.8	3364	8	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	19.5625631641414	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAAGGGGTAATCCATTA	-5683519	True	NA	NA	False	TTTAAA	-41	NA	5685074	5663194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_21865.known	chr11	-	2862	8	FSM	ENSG00000132256.20	ENST00000684655.1	2862	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_7	32.2262410504995	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTATAAAGCATCTATCTAA	-5683542	True	NA	26	True	AATAAA	-8	NA	5685097	5663571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5665396_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_21867.known	chr11	-	2290	11	FSM	ENSG00000132256.20	ENST00000380027.5	2290	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	77.4765125699395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTATCTAAGTGTCTTGA	NA	False	NA	35	True	AATAAA	-17	NA	5872358	5663562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5664174_5665655_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015_5685395_5855751_5855855_5861164_5861362_5872314
transcript_21875.known	chr11	-	3170	7	FSM	ENSG00000132256.20	ENST00000396847.7	3170	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_6	21.0211533672367	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCATCTAATACTTTGGA	-5683487	True	NA	-19	True	AATAAA	-9	NA	5685042	5663616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5684867
transcript_21876.nic	chr11	-	1286	7	ISM	ENSG00000132256.20	ENST00000684655.1	2862	8	-12	1848	-10	0	5prime_fragment	FALSE	canonical	3	80	junction_6	34.5032204616065	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGACCTGTTAATTTTTCT	-5683554	True	NA	1	True	AATAAA	-19	NA	5685109	5665419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_5665683_5665980_5666082_5667688_5667712_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_2188.known	chr1	+	892	4	FSM	ENSG00000055070.17	ENST00000471507.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	294.462599021034	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGGGGGGACCCAGCAAG	16367057	False	NA	NA	False	NA	NA	NA	16367087	16395406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16391374_16391425_16393230_16393483_16395037
transcript_21880.nnic	chr11	-	1094	5	NNC	ENSG00000132256.20	novel	1054	5	NA	NA	-10	7700	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	74.3820374821771	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTTTACCTACTTATTT	-5683554	True	NA	NA	False	AATAAA	-20	NA	5685109	5655494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_5655690_5678203_5678435_5679073_5679170_5679760_5680239_5685015
transcript_21886.known	chr11	+	2888	8	FSM	ENSG00000132274.16	ENST00000379965.8	2888	8	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_3	62.8915490250917	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAAGTCTCATTCTTCAGT	5688088	True	NA	11	True	AATAAA	-17	NA	5689789	5710863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5689900_5696166_5696656_5697247_5697344_5698314_5698546_5706593_5706617_5708172_5708274_5708576_5708604_5709052
transcript_21887.known	chr11	+	1333	2	FSM	ENSG00000180988.3	ENST00000317037.3	1333	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCATAATATGTCAATTTTC	5808906	True	NA	NA	False	AATAAA	-44	NA	5808923	5821483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_5809055_5820281
transcript_21889.known	chr11	-	1309	3	FSM	ENSG00000051009.11	ENST00000529360.1	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	10	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTGCTCATTTTTCTTT	NA	False	NA	-10	True	TATAAA	-14	NA	6215355	6211344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6211868_6214410_6214574_6214732
transcript_21891.known	chr11	+	2019	5	FSM	ENSG00000110148.10	ENST00000334619.7	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	10.1365674663566	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTCTGGATTCTTCT	6259038	True	NA	10	True	AATAAA	-21	NA	6259837	6272127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6260080_6269668_6269921_6270087_6270338_6270645_6270804_6271010
transcript_21893.known	chr11	+	1734	4	FSM	ENSG00000110148.10	ENST00000532715.5	1734	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	42.2794933218878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCCCTCTCCTTCCTTA	6259006	True	NA	-55	True	NA	NA	NA	6259805	6272062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6260080_6270087_6270338_6270645_6270804_6271010
transcript_21895.known	chr11	-	1025	2	FSM	ENSG00000170955.10	ENST00000532354.1	1025	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6320043	False	NA	-4	True	AATAAA	-17	NA	6320062	6318945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6319565_6319656
transcript_21896.known	chr11	-	1028	2	FSM	ENSG00000170955.10	ENST00000303927.4	1028	2	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACTCCGTGAGAAGGGA	-6317624	True	NA	-4	True	AATAAA	-17	NA	6320501	6318945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6319565_6320092
transcript_21899.known	chr11	+	1274	4	FSM	ENSG00000282556.4	ENST00000668307.2	1364	4	0	90	0	-90	multi-exon	FALSE	canonical	1	1	junction_1	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAGAACATCTCAATTT	6319109	True	NA	NA	False	NA	NA	NA	6319139	6330706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6319698_6323584_6323693_6323893_6324036_6330240
transcript_21900.known	chr11	+	2188	6	FSM	ENSG00000166311.10	ENST00000527275.5	2188	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.4	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGGGGTTTGGCTGC	6390150	True	NA	NA	False	NA	NA	NA	6390474	6394778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6390917_6391386_6392157_6393215_6393388_6393616_6393694_6393895_6394042_6394197
transcript_21901.known	chr11	-	2636	14	FSM	ENSG00000166313.20	ENST00000299402.10	2636	14	0	0	0	0	multi-exon	FALSE	canonical	1	118	junction_5	63.2973633970464	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6415650	True	NA	-32	True	AATAAA	-16	NA	6419070	6395124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_21902.nic	chr11	-	1919	13	NIC	ENSG00000166313.20	novel	2666	15	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	1	9	junction_12	108.366533374264	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCCTTCTTATGCCTG	-6415668	True	NA	-32	True	AATAAA	-16	NA	6419088	6395124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401689_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6418984
transcript_21906.known	chr11	-	2684	14	NNC	ENSG00000166313.20	novel	2666	15	NA	NA	-17	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	105.563576289614	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCCTTCTTATGCCTGT	-6415691	True	NA	-31	True	AATAAA	-17	NA	6419111	6395123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_6395702_6395785_6395963_6396099_6396216_6400988_6401073_6401344_6401430_6401573_6401695_6402081_6402210_6402575_6402726_6403144_6403209_6403318_6403405_6403487_6403545_6403646_6403823_6410626_6411362_6418984
transcript_21907.known	chr11	-	2838	12	FSM	ENSG00000110171.21	ENST00000345851.8	2838	12	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_11	11.1799702833769	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTGCTGGGTTCTTGT	-6469491	False	4450	0	True	AATAAA	-15	NA	6473941	6448612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6449181_6449305_6449447_6450550_6450622_6450891_6451061_6451270_6451439_6456071_6456176_6456296_6457030_6457295_6457477_6457695_6457848_6458064_6458297_6465564_6465733_6473790
transcript_2192.known	chr1	+	3401	3	FSM	ENSG00000055070.17	ENST00000492354.1	3401	3	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	247.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGATCTTTGTCCTCATTT	16353674	True	NA	17	True	TATAAA	-30	NA	16367264	16398142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16393230_16393483_16395037
transcript_21922.known	chr11	-	2543	8	FSM	ENSG00000132254.13	ENST00000254584.6	2543	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_7	46.1917034692136	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGACCTGAAGGGTGAG	-6476862	True	NA	NA	False	NA	NA	NA	6481312	6475679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_21923.known	chr11	-	1763	8	FSM	ENSG00000132254.13	ENST00000396777.8	1763	8	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_7	47.0440523035894	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAGCGAGGTCAATTTG	-6476881	True	NA	NA	False	AATAAA	-16	NA	6481331	6476518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6480322_6480464_6481230
transcript_21926.known	chr11	-	1560	8	FSM	ENSG00000132254.13	ENST00000531037.5	1560	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	93.669632218772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCTAGCACTAGGAATAAA	-6476874	True	NA	NA	False	NA	NA	NA	6481324	6476553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478858_6478960_6479139_6479259_6479971_6480069_6480322_6480424_6481230
transcript_21934.known	chr11	-	1430	7	FSM	ENSG00000132254.13	ENST00000423813.6	1430	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	93.6401207935051	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGGTGTGCTCCCTGA	-6476984	True	NA	NA	False	NA	NA	NA	6481434	6476813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6477269_6477717_6477893_6478040_6478199_6478737_6478960_6479139_6479259_6479971_6480069_6481230
transcript_2194.known	chr1	+	3447	3	FSM	ENSG00000055070.17	ENST00000401089.3	3447	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	261.5	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTTTGTCCTCATTTCAG	16353634	True	NA	20	True	TATAAA	-33	NA	16367224	16398145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16367309_16393227_16393483_16395037
transcript_21963.known	chr11	+	608	4	FSM	ENSG00000132286.12	ENST00000533379.1	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	264.373893483369	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGGTCTGTGTGGTTGTCTT	6475831	True	NA	NA	False	AGTAAA	-12	NA	6481507	6483058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6481756_6481853_6482044_6482290_6482839
transcript_21965.known	chr11	+	2788	3	FSM	ENSG00000132286.12	ENST00000254616.11	2788	3	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_1	44.5	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGCTTCCCGTCCTTCC	6475824	True	NA	24	True	AATAAA	-17	NA	6481500	6484681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6481756_6481853_6482044
transcript_21967.known	chr11	+	516	3	FSM	ENSG00000132286.12	ENST00000531462.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	30.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGTGTGGTTGTCTTCA	6475829	True	NA	NA	False	AGTAAA	-14	NA	6481505	6483060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6482044_6482290_6482839
transcript_2197.known	chr1	+	572	2	FSM	ENSG00000157191.20	ENST00000486390.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCTATGGCTATTTTG	16433601	True	NA	11	True	ATTAAA	-29	NA	16440735	16441619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16441165
transcript_21970.known	chr11	+	809	2	FSM	ENSG00000132286.12	ENST00000530751.1	809	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAACTGTTGTTTTGTG	6475824	True	NA	NA	False	NA	NA	NA	6481500	6482798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6481556_6482044
transcript_21971.known	chr11	+	1842	4	FSM	ENSG00000179532.13	ENST00000473019.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	22.2161102706022	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGCTGGTTATTAATTG	6497180	True	NA	NA	False	AATAAA	-15	NA	6497259	6504200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6497332_6497584_6497668_6498722_6498962_6502752
transcript_21976.known	chr11	-	6559	7	FSM	ENSG00000132275.11	ENST00000254605.11	6559	7	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	9.3407708461347	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATGTATAATATATAATA	-6603575	False	14814	NA	False	AATAAA	-18	NA	6603616	6595071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602216_6603403
transcript_21977.nic	chr11	-	1757	7	NIC	ENSG00000132275.11	novel	6559	7	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	35.7055862420559	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	-6603572	False	14814	-5	True	AATAAA	-19	NA	6603613	6599919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_6600266_6600485_6600583_6600668_6600776_6600925_6601056_6601148_6601603_6601851_6602265_6603403
transcript_2198.known	chr1	+	2018	8	FSM	ENSG00000157191.20	ENST00000337132.10	2018	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_5	47.5660657637869	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTATGTGAAAGATGAATG	16433589	True	NA	11	True	AATAAA	-18	NA	16440723	16460078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16455817_16455894_16458841
transcript_21983.nnic	chr11	-	448	3	Fusion	ENSG00000254400.1_ENSG00000132275.11	novel	399	2	NA	NA	-28	80242	multi-exon	FALSE	canonical	0	0	junction_1	1	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTTGGTATTCTAT	-6603603	False	14814	NA	False	AATAAA	-21	NA	6603644	6514829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_6514933_6592719_6592824_6603403
transcript_21984.known	chr11	-	726	4	FSM	ENSG00000132275.11	ENST00000534343.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	47.2534537244516	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGATATCTGTCTCATGA	-6603538	False	14814	-5	True	AATAAA	-19	NA	6603579	6599919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6600266_6600485_6600583_6600668_6600776_6603403
transcript_21988.known	chr11	+	1759	13	FSM	ENSG00000166333.14	ENST00000299421.9	1759	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	265.313598512318	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592031	True	NA	13	True	AATAAA	-15	NA	6603773	6610870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604179_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_2199.known	chr1	+	1929	7	FSM	ENSG00000157191.20	ENST00000443980.6	1929	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	168.360146379388	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGTATGTGAAAGATGAAT	16433601	True	NA	10	True	AATAAA	-17	NA	16440735	16460077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16440854_16443631_16443733_16447869_16447975_16448059_16448142_16449092_16449202_16451837_16452016_16458841
transcript_21990.known	chr11	+	1692	13	FSM	ENSG00000166333.14	ENST00000420936.6	1692	13	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	179.22539735081	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCCGCCTGTCACAAT	6592015	True	NA	-24	True	NA	NA	NA	6603757	6610833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_21994.known	chr11	-	3210	13	FSM	ENSG00000166340.18	ENST00000647209.1	3210	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	76.3489794736424	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAATAATGTTGATAAC	-6618317	True	NA	-36	True	NA	NA	NA	6619413	6613032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619260_6619383
transcript_22.known	ERCC-00051	+	258	1	FSM	ERCC-00051A	DQ516740	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	201	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00051_+_0_300
transcript_2200.known	chr1	-	164	1	FSM	ENSG00000206652.1	ENST00000383925.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	-16514268	False	NA	NA	False	NA	NA	NA	16514285	16514121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16514100_16514300
transcript_22000.known	chr11	+	1594	12	FSM	ENSG00000166333.14	ENST00000526711.5	1594	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	395.824362084795	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTGGGGACATGGGGA	6591988	True	NA	17	True	AATAAA	-19	NA	6603730	6610874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604225_6604361_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_22002.known	chr11	-	3620	12	FSM	ENSG00000166340.18	ENST00000644831.1	3620	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	59.8039496747014	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAATGTCTGCTACAC	-6618333	True	NA	-39	True	NA	NA	NA	6619429	6612793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616504_6616660_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_22006.known	chr11	-	3640	12	FSM	ENSG00000166340.18	ENST00000643479.1	3640	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	60.1925285718067	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-6618333	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617154_6617300_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_22009.known	chr11	-	635	6	FSM	ENSG00000166340.18	ENST00000534644.6	635	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	85.8682712065406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGCCAAGCAAAGAGCCC	-6618305	True	NA	NA	False	NA	NA	NA	6619401	6616974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6617154_6617353_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_2201.known	chr1	+	327	2	FSM	ENSG00000224174.2	ENST00000452795.2	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAAATTACGTTGGTT	16520668	False	NA	5	True	AATAAA	-19	NA	16520693	16521796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16520788_16521563
transcript_22010.known	chr11	-	3787	11	FSM	ENSG00000166340.18	ENST00000646777.1	3787	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	62.6932213241591	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCTACACCGAAAACCTC	-6618333	True	NA	-29	True	ATTAAA	-3	NA	6619429	6612783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6614687_6614865_6614992_6615170_6615330_6615441_6615563_6616004_6616075_6616314_6616860_6616974_6617429_6617625_6617777_6618775_6618916_6619195_6619268_6619383
transcript_22011.known	chr11	-	5312	5	FSM	ENSG00000166337.11	ENST00000299424.9	5312	5	0	0	0	0	multi-exon	FALSE	canonical	3	1249	junction_4	82.9559370991613	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTCACCATCACTAC	-6597402	True	NA	-15	True	AATAAA	-17	NA	6612216	6606293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6611012_6611188_6611304_6611387_6611453_6611663_6611819_6611957
transcript_22019.known	chr11	-	464	4	FSM	ENSG00000166340.18	ENST00000528571.6	464	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	93.6174247788424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGTGGGCATTACAGTCT	-6618307	True	NA	NA	False	GGGGCT	-45	NA	6619403	6617207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6617429_6617625_6617777_6619195_6619268_6619383
transcript_2202.nnic	chr1	+	683	2	NNC	ENSG00000224174.2	novel	327	2	NA	NA	-8	9	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTGGTTTTATCATTT	16520660	False	NA	14	True	AATAAA	-28	NA	16520685	16521805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_16521124_16521560
transcript_22020.known	chr11	+	1801	12	FSM	ENSG00000166333.14	ENST00000537806.5	1801	12	0	0	0	0	multi-exon	FALSE	canonical	3	711	junction_1	185.932450188389	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCCGCCTGTCACAATAA	6592001	True	NA	-22	True	NA	NA	NA	6603743	6610835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6603823_6604225_6604361_6608045_6608212_6608393_6608490_6608693_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_22021.known	chr11	+	2074	12	FSM	ENSG00000166333.14	ENST00000396751.6	2074	12	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_5	80.3255771663512	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTGTGGGGACATG	6592073	True	NA	13	True	AATAAA	-15	NA	6603815	6610870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6604361_6608045_6608212_6608393_6608490_6608693_6608791_6608883_6608968_6609070_6609157_6609298_6609409_6609511_6609640_6609723_6609846_6609935_6610036_6610147_6610279_6610461
transcript_22022.known	chr11	-	996	3	FSM	ENSG00000166340.18	ENST00000531754.2	996	3	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	18	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACCTCATTCATTTTCAT	-6618352	True	NA	NA	False	ATTAAA	-19	NA	6619448	6618056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6618916_6619195_6619268_6619383
transcript_22023.known	chr11	+	464	2	FSM	ENSG00000255680.1	ENST00000545572.1	464	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CGAAAGATTGCAGTGAAAAA	6618710	False	NA	NA	False	TATAAA	-13	NA	6618789	6619764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6618856_6619366
transcript_22027.known	chr11	-	448	2	FSM	ENSG00000158042.9	ENST00000532203.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCACACAGCTCAAACAC	-6673066	True	NA	NA	False	NA	NA	NA	6683316	6682148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6682403_6683122
transcript_22028.known	chr11	-	2305	3	FSM	ENSG00000158042.9	ENST00000288937.7	2305	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	26.5	3940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAAAAGTACATGAATCC	-6673090	True	NA	NA	False	NA	NA	NA	6683340	6680384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6682403_6682746_6682816_6683122
transcript_22029.known	chr11	-	1002	2	FSM	ENSG00000158042.9	ENST00000529958.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	894	junction_1	0	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTTTATATGAATATAT	-6673046	True	NA	-49	True	AATAGA	-4	NA	6683296	6681950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_6682403_6682746
transcript_2203.nnic	chr1	+	411	2	NNC	ENSG00000224174.2	novel	327	2	NA	NA	50	9	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTGGTTTTATCATTT	16520720	False	NA	14	True	AATAAA	-28	NA	16520743	16521805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_16520910_16521560
transcript_22032.nnic	chr11	-	796	3	Fusion	ENSG00000188124.4_ENSG00000283415.2	novel	4221	2	NA	NA	-47	-3722	multi-exon	FALSE	canonical	0	0	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGAATTCCAACTACATTT	-6926804	True	NA	NA	False	AATAAA	-16	NA	6926925	6769347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_6769492_6924497_6924576_6926351
transcript_22034.known	chr11	+	1503	8	FSM	ENSG00000149054.16	ENST00000610573.4	1503	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_7	29.357055960942	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGATTAGAGGCACCCAC	6924688	True	NA	NA	False	NA	NA	NA	6926422	6984238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689_6955783_6984128
transcript_22038.known	chr11	+	3655	7	FSM	ENSG00000149054.16	ENST00000278319.10	3655	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	9.14087280053473	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTTCATCCTTTATAT	6924691	True	NA	9	True	ATTAAA	-16	NA	6926425	6958047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_6926686_6927661_6927808_6932093_6932673_6941570_6941654_6943082_6943216_6943545_6943642_6955689
transcript_2204.known	chr1	+	1110	1	FSM	ENSG00000261135.1	ENST00000562878.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGACTCATCTTTGAC	16514628	True	NA	4	True	AATAAA	-16	NA	16514644	16515754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16514600_16515800
transcript_2205.nic	chr1	-	773	5	NIC	ENSG00000219481.11	novel	488	4	NA	NA	-24	-93	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	51.3833630662688	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGACACAGAATGTCAGG	-16610826	True	NA	NA	False	AATAAA	-20	NA	16613586	16593654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_16593754_16594591_16594662_16594930_16595014_16608507_16608780_16613337
transcript_22054.known	chr11	-	4892	3	FSM	ENSG00000149050.10	ENST00000278314.5	4892	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGACTAGAGGAGTCTT	-7019835	True	NA	NA	False	AATAAA	-22	NA	7020346	6997084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7001556_7002708_7002856_7020072
transcript_22057.known	chr11	-	538	3	FSM	ENSG00000149050.10	ENST00000525017.1	538	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCTCCTCATTATTC	-7019831	True	NA	NA	False	ATTAAA	-20	NA	7020342	7015819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7016025_7019682_7019746_7020072
transcript_22064.known	chr11	-	1338	10	FSM	ENSG00000166394.15	ENST00000524790.5	1338	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	121.930561092759	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATGAAGTGTGGCTCTG	-7670206	False	3266	-3	True	AATAAA	-20	NA	7673472	7665099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7665547_7665826_7665940_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_22070.known	chr11	-	1249	9	FSM	ENSG00000166394.15	ENST00000299498.11	1249	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	84.0680527905815	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670234	False	3266	-7	True	AATAAA	-16	NA	7673500	7665103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7673418
transcript_22072.nic	chr11	-	1308	9	NIC	ENSG00000166394.15	novel	1658	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_8	60.4823062969659	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	-7670986	True	NA	-7	True	AATAAA	-16	NA	7674252	7665103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_22073.nic	chr11	-	1386	9	NIC	ENSG00000166394.15	novel	1249	9	NA	NA	-201	0	combination_of_known_junctions	FALSE	canonical	3	100	junction_8	57.9254639601618	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCCATGAAGTGTGGC	NA	False	NA	-7	True	AATAAA	-16	NA	7674444	7665103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_7665547_7666450_7666551_7667727_7667814_7668477_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674225
transcript_2208.nic	chr1	-	1263	4	NIC	ENSG00000219481.11	novel	5932	29	NA	NA	-24	-441	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	51.3830927662225	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAATATGTCCAAATACAT	-16610826	True	NA	NA	False	NA	NA	NA	16613586	16594002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_16594662_16594930_16595014_16608507_16608780_16613337
transcript_2209.known	chr1	-	2752	3	FSM	ENSG00000219481.11	ENST00000599069.5	2752	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	70	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTGCTTAGAAATAAAT	-16610802	True	NA	NA	False	AATAAA	-35	NA	16613562	16599588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16601844_16608507_16608780_16613337
transcript_22091.known	chr11	-	611	6	FSM	ENSG00000166394.15	ENST00000527542.5	611	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	74.9346381855547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGATCACCTGGGAATGAT	-7670952	True	NA	NA	False	AAAACA	-4	NA	7674218	7668511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_7668562_7669204_7669335_7669624_7669732_7672450_7672524_7672747_7672892_7674111
transcript_22097.known	chr11	+	844	8	FSM	ENSG00000175390.15	ENST00000531329.6	844	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	741.465895014321	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATTTCATCTTATGTGAG	7944183	True	NA	-5	True	AATAAA	-21	NA	7987339	7996167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7987374_7991825_7991852_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_22099.known	chr11	+	6713	7	FSM	ENSG00000175390.15	ENST00000678993.1	6713	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	797.396475342655	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTAAGGTACTAGATGG	7944180	True	NA	NA	False	AAGAAA	-15	NA	7987336	8001716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7987717_7992083_7992164_7992886_7993025_7994425_7994518_7994981_7995119_7995253_7995368_7995944
transcript_22102.known	chr11	+	1692	7	FSM	ENSG00000175390.15	ENST00000528653.2	1692	7	0	0	0	0	multi-exon	FALSE	canonical	3	1943	junction_2	93.6721528642436	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTTATGTGAGTTTA	7944191	True	NA	-1	True	AATAAA	-25	NA	7987347	7996171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_7987717_7991780_7991852_7992083_7992164_7992886_7993025_7994425_7995119_7995253_7995368_7995944
transcript_22108.known	chr11	-	2929	6	FSM	ENSG00000166405.15	ENST00000343202.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	14.2407864951343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTTCTGTGTTATTTCC	NA	False	NA	NA	False	GATAAA	-1	NA	8169055	8108941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8111138_8126658_8126805_8137377_8137472_8138271_8138348_8139966_8140194_8168865
transcript_22114.known	chr11	-	1300	2	FSM	ENSG00000166405.15	ENST00000419822.2	1300	2	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	0	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTTACTTTCTGCAGAA	-8167110	True	NA	NA	False	CATAAA	-42	NA	8169025	8139053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8140194_8168865
transcript_22116.known	chr11	-	1294	4	FSM	ENSG00000166407.14	ENST00000335790.8	1294	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.63299316185545	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACTCTGCGTTGTTCAC	NA	False	NA	NA	False	ATTAAA	-20	NA	8263878	8224308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8224722_8226974_8227101_8230290_8230505_8263337
transcript_2212.known	chr1	-	2755	3	FSM	ENSG00000219481.11	ENST00000449853.2	2755	3	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_1	53.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATTTTCTGGACATAGGT	-16610774	True	NA	-3	True	AATAAA	-25	NA	16613534	16605405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16607692_16608507_16608780_16613337
transcript_22128.nnic	chr11	-	2550	13	NIC	ENSG00000130413.16	novel	2558	13	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_12	17.4547032821147	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-8592926	True	NA	-7	True	AATAAA	-19	NA	8594287	8391870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8594082
transcript_22138.known	chr11	-	2558	13	FSM	ENSG00000130413.16	ENST00000396672.5	2558	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	22.5511763674438	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTAATTTTTATGTTAAC	-8592595	False	1361	-7	True	AATAAA	-19	NA	8593956	8391870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8392711_8413494_8413693_8435493_8435580_8436026_8436140_8440677_8440754_8452821_8452907_8454743_8454833_8457340_8457480_8461804_8461910_8464708_8464823_8473162_8473277_8474680_8475067_8593743
transcript_22140.nnic	chr11	-	340	2	NNC	ENSG00000130413.16	novel	2796	16	NA	NA	-15	-97753	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTCTCATCATGT	-8592913	True	NA	NA	False	AATAAA	-20	NA	8594274	8572571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_8572720_8594082
transcript_22143.nnic	chr11	-	858	5	NNC	ENSG00000166436.17	novel	10695	25	NA	NA	-14	-2354	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.87082869338697	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAATAGTTATTTTTTCCA	-8681815	True	NA	NA	False	AATAAA	-22	NA	8682708	8674370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_8674685_8674805_8674884_8679619_8679815_8679900_8680064_8682600
transcript_22147.nic	chr11	-	2009	6	ISM	ENSG00000166444.19	ENST00000534278.5	1352	9	8119	-546	-942	0	3prime_fragment	FALSE	canonical	3	59	junction_5	46.8375917399689	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCATGTGTTCCTTGGC	-8699940	True	NA	-7	True	AATAAA	-25	NA	8699962	8693352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932_8698975_8699212
transcript_22149.known	chr11	-	769	5	FSM	ENSG00000166444.19	ENST00000532162.5	769	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	10.4253297309965	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAGAATATGGCAAATAT	-8698101	True	NA	NA	False	NA	NA	NA	8699020	8693888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8694131_8695462_8695550_8696426_8696667_8697524_8697637_8698932
transcript_22150.nnic	chr11	-	1255	4	NIC	ENSG00000166444.19	novel	3396	17	NA	NA	-190	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	78.1508512785085	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCATGTGTTCCTTGGC	-8699197	False	NA	-7	True	AATAAA	-25	NA	8699210	8693352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_8694131_8695462_8695550_8697524_8697637_8698932
transcript_22156.known	chr11	+	878	4	FSM	ENSG00000166441.13	ENST00000530022.5	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	6695	junction_3	379.545634790981	36994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497317	True	NA	29	True	ATTAAA	-17	NA	8682809	8685848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8683266_8684005_8684082_8684717_8684893_8685677
transcript_22157.known	chr11	+	4535	5	FSM	ENSG00000166441.13	ENST00000314138.11	4535	5	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	1400.79093729221	76790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTGACTAATCCCACTTA	8497299	True	NA	NA	False	NA	NA	NA	8682791	8689872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684717_8684893_8685677
transcript_22158.known	chr11	+	406	5	FSM	ENSG00000166441.13	ENST00000532359.5	406	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	2909.52354346893	4763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8497299	True	NA	29	True	ATTAAA	-17	NA	8682791	8685848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8684005_8684082_8684822_8684893_8685677
transcript_22159.known	chr11	+	651	5	FSM	ENSG00000166441.13	ENST00000534599.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2907.68662341732	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTGTGGTGTGAGTGTA	8497299	True	NA	26	True	ATTAAA	-14	NA	8682791	8685845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8683862_8684082_8684717_8684893_8685677
transcript_22160.known	chr11	+	297	3	FSM	ENSG00000166441.13	ENST00000525981.1	297	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3764	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	8682711	True	NA	28	True	ATTAAA	-16	NA	8683214	8685847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8683266_8684005_8684082_8685677
transcript_22161.known	chr11	+	558	5	FSM	ENSG00000166441.13	ENST00000524496.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2913.94329045711	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGTGAGTGTAGG	8497296	True	NA	28	True	ATTAAA	-16	NA	8682788	8685847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201_8683266_8683960_8684082_8684717_8684893_8685677
transcript_22162.known	chr11	+	607	2	FSM	ENSG00000166441.13	ENST00000529227.5	607	2	0	0	0	0	multi-exon	FALSE	canonical	3	4085	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGATTCTCCTGCCTCAGCCT	8497295	True	NA	NA	False	NA	NA	NA	8682787	8683779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8682817_8683201
transcript_22163.known	chr11	+	519	4	FSM	ENSG00000166441.13	ENST00000526562.5	519	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3372.35687448539	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGGTGTGAGTGTAGGT	8683143	False	NA	29	True	ATTAAA	-17	NA	8683200	8685848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8683266_8684005_8684082_8684685_8684893_8685677
transcript_22166.known	chr11	+	1273	6	FSM	ENSG00000166452.12	ENST00000309377.9	1273	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	68.6964336774479	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATTCATTTTTATTAAG	8907739	True	NA	NA	False	AATAAA	-17	NA	8911188	8920079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8917286_8917368_8919336
transcript_22175.known	chr11	+	1232	5	FSM	ENSG00000166452.12	ENST00000309357.8	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	41.5391381711272	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	8911134	False	NA	NA	False	AATAAA	-22	NA	8911153	8920084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911224_8911443_8911672_8912452_8912534_8914825_8914931_8919336
transcript_22178.known	chr11	+	1247	5	FSM	ENSG00000166452.12	ENST00000299576.9	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	72.7233628210357	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTTTATTAAGAGGTG	8911119	False	NA	NA	False	AATAAA	-22	NA	8911138	8920084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911224_8911443_8911672_8914825_8914931_8917286_8917368_8919336
transcript_22189.known	chr11	+	1084	4	FSM	ENSG00000166452.12	ENST00000396648.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	47.6188571424762	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGGATTACAGGCGTGA	8907888	True	NA	NA	False	NA	NA	NA	8911337	8919900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911672_8914825_8914931_8917286_8917368_8919336
transcript_22193.known	chr11	+	513	3	FSM	ENSG00000166452.12	ENST00000529942.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	55.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATTCTCTTAATAGCT	8911433	False	NA	6	True	AATAAA	-7	NA	8911464	8919537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8911672_8914825_8914931_8919336
transcript_22195.known	chr11	-	924	3	FSM	ENSG00000176029.14	ENST00000527607.1	924	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATTCAGTCCTCATCT	-8932977	True	NA	NA	False	NA	NA	NA	8933006	8928900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8929534_8932141_8932327_8932900
transcript_22198.known	chr11	-	1433	5	FSM	ENSG00000175348.11	ENST00000525069.5	1433	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	70.1511760414606	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCCTGGATTGATAATAT	NA	False	NA	3	True	AATAAA	-23	NA	8965011	8947500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964889
transcript_22201.known	chr11	+	4181	4	FSM	ENSG00000254860.7	ENST00000657967.1	4181	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAGACTCCGTCTCAA	8964053	True	NA	NA	False	NA	NA	NA	8964509	8971123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8965149_8965903_8966045_8966540_8966657_8967838
transcript_22202.known	chr11	-	1659	4	FSM	ENSG00000175348.11	ENST00000309134.9	1659	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	73.3136337176714	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTGTATCTATCTATG	-8962779	True	NA	-9	True	AATAAA	-19	NA	8964441	8947293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8964208
transcript_22206.nic	chr11	+	1250	2	FSM	ENSG00000254860.7	ENST00000689197.1	1246	2	-4	0	-4	0	multi-exon	FALSE	canonical	2	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTTGTTTTTTGACCT	8964447	False	NA	NA	False	AATAAA	-17	NA	8964497	8966502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_8965149_8965903
transcript_22207.known	chr11	-	1844	5	FSM	ENSG00000175348.11	ENST00000534025.6	1844	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_4	17.9495821678389	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAGACTACTGTTTTAT	-8962780	True	NA	83	True	TATAAA	-17	NA	8964442	8947201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8948476_8953202_8953338_8956189_8956299_8962091_8962184_8964208
transcript_2221.nnic	chr1	-	592	4	NNC	ENSG00000283773.1	novel	166	2	NA	NA	-1588	7736	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	21.9291789378647	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642314	True	NA	NA	False	AAAAAG	-20	NA	16644697	16635030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16642766_16642851_16643027_16643146_16644445
transcript_22210.known	chr11	-	3761	7	FSM	ENSG00000175352.11	ENST00000309166.8	3761	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	3.62476052848859	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTTGTCTGACAAAGTC	-9003610	True	NA	-3	True	AATAAA	-19	NA	9004001	8980575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_8983561_8983874_8983970_8984071_8984125_8985710_8985851_8987547_8987631_8988117_8988283_9003761
transcript_22214.known	chr11	-	1440	8	FSM	ENSG00000166471.11	ENST00000611268.4	1440	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	91.5561609737155	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACATTTGGGATTT	-9307613	True	NA	-7	True	AATAAA	-18	NA	9314567	9280656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9281042_9283370_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_2222.nnic	chr1	-	499	4	NNC	ENSG00000283773.1	novel	166	2	NA	NA	-1560	7736	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	12.684198393627	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642286	True	NA	NA	False	AAAAAG	-20	NA	16644669	16635030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16642766_16642851_16643027_16643146_16644510
transcript_22220.known	chr11	-	3798	7	FSM	ENSG00000166471.11	ENST00000528080.6	3798	7	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	22.4158921799294	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCACATTTGGGATTTATT	-9307639	True	NA	-4	True	AATAAA	-21	NA	9314593	9280653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9283594_9286454_9286594_9287701_9287807_9288441_9288536_9295258_9295388_9299583_9299702_9314320
transcript_22229.known	chr11	-	723	3	FSM	ENSG00000166471.11	ENST00000533723.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_2	10	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTTGCTGAACTAATT	-9307679	True	NA	NA	False	ATTAAA	-40	NA	9314633	9295095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9295388_9299583_9299702_9314320
transcript_2223.nic	chr1	-	459	4	ISM	ENSG00000215908.10	ENST00000639456.1	2575	13	-78	16758	-78	-5361	5prime_fragment	FALSE	canonical	3	42	junction_3	4.64279609239471	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16644701	False	NA	NA	False	AAAAAG	-20	NA	16644764	16635030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_16635169_16642766_16642851_16643027_16643146_16644645
transcript_22237.known	chr11	+	182	1	FSM	ENSG00000201998.1	ENST00000365128.1	182	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCAGGGAATAGAGATTA	9428745	False	NA	5	True	NA	NA	NA	9428772	9428954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9428800_9429000
transcript_22238.known	chr11	+	6162	25	FSM	ENSG00000205339.10	ENST00000379719.8	6162	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	69.627269063365	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAACTGTCAGTTCT	9374682	True	NA	13	True	AATAAA	-22	NA	9384651	9448127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9384848_9403289_9403372_9408485_9408640_9409927_9410087_9414254_9414412_9417058_9417149_9420410_9420506_9420613_9420699_9423005_9423141_9423776_9423877_9424913_9424991_9425145_9425263_9428539_9428630_9429030_9429197_9429673_9429835_9430874_9431004_9433569_9433637_9433720_9433847_9434933_9435032_9436270_9436367_9437753_9437975_9438079_9438286_9440454_9440662_9442080_9442198_9445096
transcript_22241.known	chr11	+	2900	16	FSM	ENSG00000166478.10	ENST00000396602.7	2900	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	22.1305219097969	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTATATTTATTTATTTA	9456772	True	NA	20	True	AATACA	-19	NA	9461011	9528524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_22245.known	chr11	+	2022	16	FSM	ENSG00000166478.10	ENST00000530463.5	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	32.6187403530888	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCAGAACAATGGAGCAA	9456736	True	NA	NA	False	NA	NA	NA	9460975	9527613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9461077_9471301_9471421_9472676_9472770_9473940_9474025_9474552_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_22255.known	chr11	+	1954	15	FSM	ENSG00000166478.10	ENST00000396597.7	1954	15	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	48.7306214754927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTCATCTTCTGGCAGC	9456747	True	NA	NA	False	AATAAA	-10	NA	9460986	9527646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9461077_9471301_9471421_9473940_9474025_9474549_9474634_9478389_9478587_9479471_9479547_9494645_9494766_9496302_9496379_9497674_9497801_9501090_9501271_9508618_9508847_9512447_9512597_9516200_9516363_9525239_9525387_9527529
transcript_22256.known	chr11	-	1147	1	FSM	ENSG00000268403.2	ENST00000596206.2	1147	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	200	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGGATTACTGTTTTTTG	-9460686	False	NA	-2	True	AATAAA	-14	NA	9460702	9459555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9459600_9460700
transcript_22257.known	chr11	+	627	6	FSM	ENSG00000166478.10	ENST00000533542.5	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	69.9468369549331	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATGAGCAAGAGAAAAAAAT	9456742	True	NA	NA	False	NA	NA	NA	9460981	9479522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9461077_9471301_9471421_9473940_9474025_9474552_9474634_9478389_9478587_9479471
transcript_22258.known	chr11	+	2777	10	FSM	ENSG00000166483.12	ENST00000681684.1	2777	10	0	0	0	0	multi-exon	TRUE	canonical	3	560	junction_5	52.3959285950095	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCTAACAGATGTTGAAAA	9575485	False	NA	NA	False	AATATA	-35	NA	9575495	9589622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9576094_9576229_9576294_9576486_9576660_9577141_9577264_9581531_9581679_9585257_9585354_9585441_9585528_9586448_9586620_9586710_9586857_9588448
transcript_22259.known	chr11	+	468	1	FSM	ENSG00000243964.1	ENST00000475608.1	468	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	144	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGAGTCCAGATGCCTAAT	NA	False	NA	NA	False	NA	NA	NA	9606141	9606609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9606100_9606600
transcript_22261.known	chr11	+	4884	12	FSM	ENSG00000133789.15	ENST00000318950.11	4884	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_11	44.1337186736733	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGTGTATCTATGTGTA	9657792	True	NA	50	True	AATAAA	-16	NA	9664076	9752993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_22266.known	chr11	+	3538	11	FSM	ENSG00000133789.15	ENST00000447399.6	3538	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	95.0391498278473	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTATAGTTGCCTTTATAA	9657792	True	NA	10	True	AATAAA	-19	NA	9664076	9751821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9664279_9694145_9694287_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180_9740348_9747857_9748057_9749086_9749184_9749863
transcript_22267.known	chr11	+	3006	9	FSM	ENSG00000133789.15	ENST00000524817.5	3006	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_6	41.182520563948	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTACTTGGGAGGC	9657850	True	NA	NA	False	TTTAAA	-13	NA	9664134	9741953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9664279_9694145_9694287_9713465_9713640_9724657_9724886_9728052_9728200_9729342_9729452_9732528_9732711_9738212_9738321_9740180
transcript_22269.nnic	chr11	-	1140	7	NIC	ENSG00000133812.18	novel	1250	8	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	68.4876306755866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCTTGGGTAAATTGTT	-10044446	True	NA	-2	True	AATAAA	-21	NA	10044699	10016420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_10016780_10020162_10020285_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
transcript_2227.known	chr1	-	1296	4	FSM	ENSG00000215908.10	ENST00000639481.1	1296	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	13.1993265821489	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGTGTTCTCCTGCTGT	-16626362	False	NA	-4	True	AATAAA	-26	NA	16626386	16618252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16619104_16619844_16620025_16625774_16626006_16626352
transcript_22270.nnic	chr11	-	1159	6	FSM	ENSG00000133812.18	ENST00000533661.2	894	6	-225	-40	-225	0	multi-exon	FALSE	canonical	3	11	junction_1	63.4331143804244	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGGCTTGGGTAAATTGTT	NA	False	NA	-2	True	AATAAA	-21	NA	10044840	10016420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10016780_10028451_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
transcript_22273.nic	chr11	-	2102	5	ISM	ENSG00000133812.18	ENST00000533661.2	894	6	-29	10493	-29	0	5prime_fragment	FALSE	canonical	3	27	junction_4	53.7331368896326	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTCTAGTGCAAGTT	-10044391	True	NA	-4	True	ATTAAA	-14	NA	10044644	10026953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_10028558_10029764_10029876_10031047_10031171_10042843_10042982_10044518
transcript_22282.nnic	chr11	+	794	3	NIC	ENSG00000246273.8	novel	854	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAATAGTCAATCTATTA	9758021	True	NA	NA	False	AATAAA	-21	NA	9758285	9791244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_9758504_9780375_9780576_9790868
transcript_22284.known	chr11	+	3872	3	FSM	ENSG00000246273.8	ENST00000658574.1	3872	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAATAAAAGTTAAAAAAAG	9758055	True	NA	-19	True	NA	NA	NA	9758319	9811335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9758504_9780375_9780576_9807847
transcript_22287.nnic	chr11	+	424	2	NIC	ENSG00000246273.8	novel	854	4	NA	NA	0	-155	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTTGTTGGCTGTTTGTT	9758029	True	NA	NA	False	AGTAAA	-25	NA	9758293	9791082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_9758504_9790868
transcript_22289.known	chr11	+	3714	2	FSM	ENSG00000246273.8	ENST00000663578.1	3714	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCTGAACACAAAATAAAAG	9758003	True	NA	-29	True	NA	NA	NA	9758267	9811325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_9758504_9807847
transcript_22292.known	chr11	-	2168	2	FSM	ENSG00000245522.2	ENST00000525154.1	2168	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTAAAGGTGAGCCAGTTC	-9758146	False	NA	NA	False	NA	NA	NA	9758164	9755128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_9756899_9757766
transcript_22295.known	chr11	+	1492	4	FSM	ENSG00000148926.10	ENST00000278175.10	1492	4	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_3	17.2819751957543	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTCTCTCGGCTCGGCT	10301041	True	NA	34	True	AATAAA	-16	NA	10305072	10307397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305230_10305679_10305799_10305948_10306099_10306331
transcript_22296.known	chr11	+	1640	3	FSM	ENSG00000148926.10	ENST00000534464.1	1640	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	20	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCATTCTCTCGGCTCGG	10301041	True	NA	32	True	AATAAA	-14	NA	10305072	10307395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305230_10305679_10306099_10306331
transcript_22297.known	chr11	+	1889	3	FSM	ENSG00000148926.10	ENST00000528655.5	1889	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATATGCGAACAGCAAAC	10301052	False	NA	-8	True	CATAAA	-5	NA	10305083	10307355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305799_10305948_10306099_10306331
transcript_22298.known	chr11	+	1839	2	FSM	ENSG00000148926.10	ENST00000530439.1	1839	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCGAACAGCAAACCAATAAA	10301042	True	NA	-1	True	CATAAA	-12	NA	10305073	10307362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10305230_10305679
transcript_22303.known	chr11	-	4049	6	FSM	ENSG00000110315.7	ENST00000265981.7	4049	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_4	8.44748483277715	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTTTTAACTGCTAT	-10538458	True	NA	-12	True	ATTAAA	-16	NA	10541187	10511672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10515067_10519033_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_22307.known	chr11	-	1374	5	FSM	ENSG00000110315.7	ENST00000528665.5	1374	5	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_3	8.87059749960509	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATAAAGGTACTAGATAC	-10538461	True	NA	NA	False	NA	NA	NA	10541190	10518317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10519142_10525191_10525374_10530642_10530752_10534015_10534206_10541121
transcript_2231.nnic	chr1	-	415	3	NNC	ENSG00000215908.10	novel	2575	13	NA	NA	3	-5361	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	8	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16642286	True	NA	NA	False	AAAAAG	-20	NA	16644669	16635030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16635169_16643027_16643146_16644510
transcript_22311.known	chr11	+	643	3	FSM	ENSG00000177112.9	ENST00000663840.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCCCCGTTGCCTAGAG	NA	False	NA	NA	False	AATAAA	-34	NA	10541257	10599936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10541543_10594116_10594229_10599690
transcript_22312.known	chr11	+	4330	25	FSM	ENSG00000198730.9	ENST00000361367.7	4330	25	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_6	28.4696475800691	252	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGTAACTTCGTGTCTT	10746932	True	NA	17	True	AATAAA	-18	NA	10751245	10779746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10751458_10752671_10752771_10754957_10755198_10755677_10755796_10756748_10756839_10760172_10760322_10761946_10762055_10763430_10763539_10763642_10763880_10764111_10764202_10764307_10764437_10764547_10764732_10766401_10766491_10767805_10767992_10768073_10768162_10768342_10768492_10770209_10770327_10770486_10770633_10771544_10771617_10772519_10772656_10773126_10773274_10774011_10774170_10775206_10775304_10775520_10775634_10778678
transcript_2232.nnic	chr1	-	375	3	NIC	ENSG00000215908.10	novel	2575	13	NA	NA	-78	-5361	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	1.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTAAGTAGCCTTTCAA	-16644701	False	NA	NA	False	AAAAAG	-20	NA	16644764	16635030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_16635169_16643027_16643146_16644645
transcript_22322.known	chr11	-	3794	22	FSM	ENSG00000110321.19	ENST00000339995.11	3794	22	0	0	0	0	multi-exon	FALSE	canonical	3	5403	junction_21	454.056356197306	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTGATGTGTGGCTGTA	-10736210	True	NA	-36	True	AATAAA	-16	NA	10808926	10797053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_22328.known	chr11	-	3346	21	FSM	ENSG00000110321.19	ENST00000396525.7	3346	21	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_8	1237.18492857778	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAATTGGTCCCTCCTA	-10808640	False	NA	-74	True	NA	NA	NA	10808708	10797169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_2234.known	chr1	-	164	1	FSM	ENSG00000207513.1	ENST00000384782.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	NA	False	NA	NA	False	NA	NA	NA	16666948	16666784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16666800_16666900
transcript_22347.nic	chr11	-	1101	8	ISM	ENSG00000110321.19	ENST00000339995.11	3794	22	-91	6845	-77	43	5prime_fragment	FALSE	canonical	3	5403	junction_7	457.483444553807	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTGTGACAGGGAAGTT	-10808949	False	NA	NA	False	AAAACA	-1	NA	10809017	10803898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10808704
transcript_2235.known	chr1	-	2575	13	FSM	ENSG00000215908.10	ENST00000639456.1	2575	13	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	33.0676915163763	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTGACAAGAGTGTAACTA	-16642303	True	NA	-24	True	AATAAA	-6	NA	16644686	16618272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16619104_16625774_16626006_16626352_16626500_16627144_16627290_16628467_16628651_16630889_16631110_16631529_16631614_16632274_16632372_16633094_16633347_16635026_16635169_16642766_16642851_16643027_16643146_16644645
transcript_22358.known	chr11	-	523	2	FSM	ENSG00000110321.19	ENST00000534246.1	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	5403	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGTCCGAGTTCAGTC	-10736203	True	NA	NA	False	AATAAA	-23	NA	10808919	10807073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10807382_10808704
transcript_22361.known	chr11	-	4001	22	FSM	ENSG00000110321.19	ENST00000526148.6	4001	22	0	0	0	0	multi-exon	TRUE	canonical	1	31	junction_21	1397.76107658315	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGTGGCTGTAAATG	-10807905	False	NA	-32	True	AATAAA	-20	NA	10807973	10797049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10797882_10798991_10799114_10799212_10799425_10799551_10799757_10800089_10800349_10800431_10800648_10800730_10800836_10800961_10801088_10801660_10801775_10802048_10802210_10802293_10802436_10803029_10803129_10803210_10803295_10803479_10803591_10803898_10804051_10804136_10804204_10804286_10804419_10804912_10805016_10805906_10806048_10806819_10806886_10807254_10807382_10807548
transcript_22362.known	chr11	-	591	5	FSM	ENSG00000110321.19	ENST00000530211.6	591	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	2678.43950603705	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTAAGTTTTAAATATTG	-10736207	True	NA	NA	False	NA	NA	NA	10808923	10804915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10805016_10805906_10806048_10806819_10806886_10807254_10807320_10808704
transcript_22363.known	chr11	-	1512	3	FSM	ENSG00000236287.8	ENST00000526020.5	1512	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	62.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGAAAGTTATTTGTC	-10858761	True	NA	NA	False	AGTAAA	-19	NA	10858796	10854618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10855082_10856143_10856258_10857861
transcript_22364.known	chr11	+	1094	3	FSM	ENSG00000247271.8	ENST00000501079.6	1094	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	10.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857636	True	NA	15	True	AATAAA	-20	NA	10858216	10879272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858352_10865260_10865328_10878380
transcript_22365.known	chr11	+	1020	3	FSM	ENSG00000247271.8	ENST00000658394.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATGGCTTTTTTTTTGTTT	10857644	True	NA	21	True	AATAAA	-26	NA	10858224	10879278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858280_10865260_10865328_10878380
transcript_22366.known	chr11	-	586	3	FSM	ENSG00000236287.8	ENST00000528289.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	57	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATCAGAAGGTTGGAA	-10854834	True	NA	NA	False	NA	NA	NA	10858065	10854766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10855087_10856143_10856206_10857861
transcript_22369.known	chr11	-	2741	3	FSM	ENSG00000236287.8	ENST00000432999.6	2741	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	58	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTTATTATTGGTATTT	-10854842	True	NA	-1	True	TTTAAA	-5	NA	10858073	10852703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10855119_10856143_10856258_10857861
transcript_2237.nnic	chr1	+	1871	2	NNC	ENSG00000227684.2	novel	573	2	NA	NA	-15	1386	intron_retention	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAACTGATTTTCTCGTGT	16740104	True	NA	NA	False	CATAAA	-16	NA	16740264	16752354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_16740454_16750672
transcript_22373.known	chr11	-	544	3	FSM	ENSG00000236287.8	ENST00000530570.1	544	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	71	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAATTCACTTCTTCAGA	-10854834	True	NA	NA	False	NA	NA	NA	10858065	10855657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_10855884_10856143_10856258_10857861
transcript_22376.known	chr11	+	1040	2	FSM	ENSG00000247271.8	ENST00000664153.2	1042	2	0	2	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTAGTATGGCTTTTTTT	10857638	True	NA	15	True	AATAAA	-20	NA	10858218	10879272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858367_10878380
transcript_22379.known	chr11	+	2666	2	FSM	ENSG00000247271.8	ENST00000669704.1	2666	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGCTTTCATTCTTTC	10857638	True	NA	NA	False	NA	NA	NA	10858218	10908972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_10858367_10906454
transcript_22380.known	chr11	-	2503	11	FSM	ENSG00000110328.6	ENST00000227756.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.83438085832593	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTTGCAGTCATTTGGT	-11621400	True	NA	-13	True	AATAAA	-16	NA	11622005	11270876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_11271291_11293028_11293194_11327085_11327182_11332693_11332832_11340818_11341005_11372514_11372630_11377181_11377380_11379080_11379265_11432620_11432788_11448743_11448937_11621358
transcript_22382.nic	chr11	+	1551	9	ISM	ENSG00000170242.19	ENST00000399455.2	7396	29	100731	2890	-153	-512	3prime_fragment	TRUE	canonical	3	155	junction_8	22.009940935859	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAACCTTCTATTAGAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	11942796	11956433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_11943113_11947944_11948121_11948477_11948559_11949888_11950005_11950363_11950483_11952740_11952872_11954896_11954945_11955033_11955165_11956000
transcript_22386.known	chr11	-	2525	7	FSM	ENSG00000050165.19	ENST00000683431.1	2525	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	10.2048463432278	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAATAGAAACAACCTGT	-12007606	False	1020	69	True	AATAAA	-26	NA	12008626	11963035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_11964687_11965808_11965966_11966953_11967099_11968394_11968488_11998695_11998780_12002299_12002438_12008369
transcript_22388.known	chr11	+	8627	13	FSM	ENSG00000197702.14	ENST00000334956.15	8627	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	6.94422221866655	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGCTTTCTCTCCCAT	12375659	True	NA	NA	False	ATTAAA	-45	NA	12377570	12535356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_12377784_12473744_12473835_12473912_12473984_12477846_12477950_12496457_12496599_12504313_12504430_12508583_12508643_12511513_12511534_12513298_12513361_12513996_12514066_12517609_12517712_12518444_12518518_12527848
transcript_22391.nnic	chr11	-	2151	3	NNC	ENSG00000254670.1	novel	670	2	NA	NA	-84	5400	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGCTTGACTCTGCAC	NA	False	NA	NA	False	AATAAA	-18	NA	13009243	12995689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_12997087_13001089_13001227_13008626
transcript_22400.known	chr11	-	2439	9	FSM	ENSG00000148925.11	ENST00000278174.10	2439	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	44.2632395447961	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATAACCACATTGACCAG	-13460671	True	NA	-11	True	AATAAA	-30	NA	13463222	13388007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13445023_13445182_13463091
transcript_22403.known	chr11	-	1662	8	FSM	ENSG00000148925.11	ENST00000528120.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	29.7822026021706	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTTTTAAAGACCAAAG	-13460746	True	NA	NA	False	NA	NA	NA	13463297	13388701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_13389142_13403167_13403279_13405658_13405857_13413529_13413651_13417157_13417261_13419459_13419746_13421641_13421839_13463091
transcript_22406.known	chr11	+	1341	1	FSM	ENSG00000287548.1	ENST00000661088.1	1341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGTATACTATAGTTTTA	13463336	True	NA	NA	False	TATAAA	-25	NA	13463376	13464717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_13463400_13464700
transcript_22408.known	chr11	+	5266	12	FSM	ENSG00000197601.13	ENST00000354817.8	5266	12	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_3	22.7396330025555	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGATGTGCTCCTTTGCA	13660803	True	NA	19	True	ATTAAA	-22	NA	13668667	13732346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965_13713034_13714508_13714681_13721729_13721860_13727555_13727684_13728611
transcript_22414.known	chr11	+	1109	8	FSM	ENSG00000197601.13	ENST00000532701.1	1109	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_3	22.8079828488328	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCCTGAAGTTTTAATGT	13660846	True	NA	NA	False	AATAAA	-15	NA	13668710	13713084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_13668807_13694758_13694955_13700316_13700493_13707899_13708080_13710692_13710871_13711763_13711809_13711927_13712047_13712965
transcript_22427.nnic	chr11	-	1987	6	NNC	ENSG00000133818.14	novel	2343	6	NA	NA	1270	0	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_5	370.751129465576	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-14340811	False	2105	-14	True	ATTAAA	-19	NA	14340824	14277921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14340759
transcript_22428.known	chr11	-	970	6	FSM	ENSG00000133818.14	ENST00000526063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	387.629513840213	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTATATACACAGACATGC	-14358465	False	10664	NA	False	AATATA	-2	NA	14358485	14279102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358256
transcript_22429.known	chr11	-	2343	6	FSM	ENSG00000133818.14	ENST00000256196.9	2343	6	0	0	0	0	multi-exon	FALSE	canonical	3	702	junction_5	129.593827013481	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTTTGATTACTCAT	-14348519	True	NA	-14	True	ATTAAA	-19	NA	14359183	14277921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767_14295856_14358762
transcript_2244.known	chr1	+	573	2	FSM	ENSG00000227684.2	ENST00000633627.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGGGGTGCAGGGAGGC	16740119	True	NA	NA	False	NA	NA	NA	16740279	16750968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16740398_16750513
transcript_22441.known	chr11	-	1884	5	FSM	ENSG00000133818.14	ENST00000414023.6	1884	5	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	81.5793325542689	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTTCAGGTGCTAGAAT	NA	False	NA	-56	True	NA	NA	NA	14295859	14277963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14279425_14281601_14281721_14294470_14294580_14294759_14294863_14295767
transcript_22445.known	chr11	-	1266	11	FSM	ENSG00000129084.18	ENST00000418988.2	1266	11	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_9	584.707482421766	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGTGAGTTTTTTCCAA	-14643395	True	NA	NA	False	NA	NA	NA	14643617	14505063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14610965_14611152_14643454
transcript_2245.known	chr1	+	164	1	FSM	ENSG00000207389.1	ENST00000384659.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTCTGGAGTTTCAAAAA	16740355	False	NA	NA	False	NA	NA	NA	16740515	16740679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16740500_16740700
transcript_22459.known	chr11	-	479	2	FSM	ENSG00000129084.18	ENST00000528018.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGCTAGAAAACAAAAAGAG	-14643413	True	NA	NA	False	AAAACA	-36	NA	14643635	14610853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14611152_14643454
transcript_22460.known	chr11	-	1195	10	FSM	ENSG00000129084.18	ENST00000396394.7	1195	10	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_9	123.648645986606	11001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGGGTTTTTGTTTTTTT	-14505099	True	NA	-1	True	AATAAA	-20	NA	14520386	14504875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14520296
transcript_22461.known	chr11	-	1527	10	FSM	ENSG00000129084.18	ENST00000530457.5	1527	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	448.646634300466	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAACTGTGAAATAAAAT	-14505076	True	NA	-38	True	NA	NA	NA	14520363	14504912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14505249_14507655_14507767_14510871_14510952_14513569_14513700_14513816_14513888_14514402_14514492_14517641_14517746_14517879_14517982_14518996_14519042_14519904
transcript_22468.known	chr11	-	3481	22	FSM	ENSG00000129083.13	ENST00000249923.7	3481	22	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_21	128.201478336324	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAATGGATTTCTTTTAG	-14492149	True	NA	-8	True	AATAAA	-23	NA	14499852	14457505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499608
transcript_22470.known	chr11	-	3336	22	FSM	ENSG00000129083.13	ENST00000439561.7	3336	22	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_21	76.4133347814784	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492108	True	NA	-14	True	AATAAA	-17	NA	14499811	14457511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499706
transcript_22471.nic	chr11	-	3354	22	NIC	ENSG00000129083.13	novel	3336	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_21	113.640819372549	917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATATGGCAATGGATTTC	-14492161	True	NA	-14	True	AATAAA	-17	NA	14499864	14457511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14457884_14458531_14458688_14460207_14460298_14461185_14461332_14464910_14465031_14466281_14466427_14468680_14468861_14469335_14469564_14474494_14474616_14475784_14475946_14476918_14477016_14479568_14479715_14480758_14480906_14480989_14481098_14483031_14483152_14486366_14486505_14488491_14488585_14490564_14490680_14493641_14493812_14494209_14494440_14498837_14498986_14499741
transcript_22492.known	chr11	-	1668	5	FSM	ENSG00000186104.11	ENST00000534686.5	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	32.3612422505688	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891091	True	NA	NA	False	AATAAA	-24	NA	14891662	14878008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891152
transcript_22494.nic	chr11	-	1439	5	NIC	ENSG00000186104.11	novel	1668	5	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	32.8861673048107	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	NA	False	NA	NA	False	AATAAA	-24	NA	14892261	14878008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14878298_14879113_14879208_14880135_14880769_14885775_14885918_14891980
transcript_22501.nic	chr11	-	2645	5	NIC	ENSG00000186104.11	novel	1882	5	NA	NA	-20	0	intron_retention	FALSE	canonical	3	22	junction_4	25.2438111227287	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891111	True	NA	NA	False	AATAAA	-24	NA	14891682	14878008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14890431
transcript_22502.known	chr11	-	1882	5	FSM	ENSG00000186104.11	ENST00000530609.5	1882	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	28.2001773044071	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891069	True	NA	NA	False	AATAAA	-24	NA	14891640	14878008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891152
transcript_22505.known	chr11	-	2214	5	FSM	ENSG00000186104.11	ENST00000334636.10	2214	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	28.9568644711405	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGCTATTGAATCTTT	-14892008	True	NA	NA	False	AATATA	-18	NA	14892231	14877439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14878298_14879113_14879444_14880135_14880769_14885775_14885918_14891980
transcript_22509.nic	chr11	-	1047	4	NIC	ENSG00000186104.11	novel	1668	5	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	40.9416929574514	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACACAGATGTGTCTTAA	-14891103	True	NA	NA	False	AATAAA	-24	NA	14891674	14878008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14878298_14879113_14879208_14885775_14885918_14891152
transcript_22518.known	chr11	+	1044	5	FSM	ENSG00000175868.14	ENST00000324229.11	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	6.04152298679729	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	15073209	True	NA	10	True	AATAAA	-20	NA	15073592	15078637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_15073664_15074709_15074805_15075060_15075199_15077285_15077471_15078082
transcript_22523.nnic	chr11	+	1015	4	NIC	ENSG00000175868.14	novel	1044	5	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	41.8807831827438	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGGGCCAGATATTATT	15073143	True	NA	10	True	AATAAA	-20	NA	15073526	15078637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_15073664_15075060_15075199_15077285_15077471_15078082
transcript_22527.known	chr11	-	916	5	FSM	ENSG00000110680.13	ENST00000361010.7	916	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.78535710713571	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGAATCTCTGCTGCTATT	-14972258	False	NA	NA	False	ATTAAA	-23	NA	14972286	14966668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14967102_14967673_14967855_14969934_14970076_14971106_14971202_14972220
transcript_22528.nic	chr11	-	1110	5	NIC	ENSG00000110680.13	novel	851	4	NA	NA	-152	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.38484800354236	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAATCTCTGCTGCTATTT	NA	False	NA	NA	False	ATTAAA	-24	NA	14972503	14966667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_14967102_14967673_14967855_14969934_14970076_14971106_14971202_14972244
transcript_22530.known	chr11	-	840	4	FSM	ENSG00000110680.13	ENST00000331587.9	840	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.62466929133727	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGAGCTGTGGTGGTCA	-14972323	True	NA	NA	False	AATAAA	-17	NA	14972351	14968500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_14968998_14969934_14970076_14971106_14971202_14972244
transcript_22539.nnic	chr11	+	864	4	NIC	ENSG00000254946.2	novel	743	3	NA	NA	-121	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_3	4.02768199119819	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGAGGAAGGAATGGTTA	15552380	True	NA	NA	False	AATAAA	-20	NA	15552733	15604169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_15552914_15561877_15562229_15585707_15585803_15603931
transcript_22568.known	chr11	+	405	4	FSM	ENSG00000110696.10	ENST00000524439.5	405	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1204.35773570628	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGATGATGACGATGA	16699492	True	NA	NA	False	NA	NA	NA	16738643	16754906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16748096_16748158_16752784_16752895_16754870
transcript_22571.known	chr11	+	3920	5	FSM	ENSG00000110696.10	ENST00000228136.9	3920	5	0	0	0	0	multi-exon	FALSE	canonical	3	2316	junction_2	137.175981862715	9152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCAGCACTGCCCATTACC	16699495	True	NA	7	True	AGTAAA	-17	NA	16738646	16758340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16744600_16744685_16748096_16748158_16752784_16752895_16754870
transcript_22572.known	chr11	+	762	3	FSM	ENSG00000110696.10	ENST00000525256.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	2316	junction_2	117.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTAGCCTGGTGTGGTG	16699507	True	NA	NA	False	ACTAAA	-16	NA	16738658	16748591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16744600_16744685_16748096
transcript_22573.known	chr11	+	575	4	FSM	ENSG00000110696.10	ENST00000525684.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	1219.44768918829	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATAAAATGATGTTTGTTA	16699506	True	NA	NA	False	AAAAAG	-14	NA	16738657	16755067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_16738842_16744600_16744685_16752784_16752895_16754870
transcript_22574.known	chr11	-	5530	27	FSM	ENSG00000166689.16	ENST00000531066.6	5530	27	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	10.5055634739563	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACGTTTCCTGTTTCTTGCT	-17013090	True	NA	-13	True	ATTAAA	-13	NA	17014414	16777296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_16779021_16782753_16782897_16783699_16783834_16786228_16786388_16789095_16789297_16789774_16789879_16790797_16790916_16791010_16791200_16794487_16794715_16794909_16795019_16800973_16801076_16801667_16801818_16802971_16803053_16803226_16803296_16813112_16813167_16816177_16816265_16816799_16817323_16826119_16826591_16841546_16841723_16851190_16851292_16852282_16852356_16854888_16854994_16855802_16855915_16871098_16871183_17013988_17014047_17014124_17014202_17014315
transcript_22577.known	chr11	-	321	1	FSM	ENSG00000244398.1	ENST00000459748.1	321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51368	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTCATCTTTTATTATGAA	-16968304	False	NA	-67	True	NA	NA	NA	16975013	16974692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_16974700_16975000
transcript_22579.known	chr11	+	1290	2	FSM	ENSG00000184669.10	ENST00000530490.3	1332	2	0	42	0	-25	multi-exon	FALSE	canonical	3	25	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGTCCTGCGGCGCCTGCA	17013762	True	NA	NA	False	ATTAAA	-1	NA	17013997	17052951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17014368_17052031
transcript_22602.known	chr11	-	561	6	FSM	ENSG00000110700.7	ENST00000526895.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_5	6576.52207173366	50126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	-16938725	True	NA	31	True	AATAAA	-19	NA	17077706	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077474_17077618
transcript_22603.known	chr11	-	491	6	FSM	ENSG00000110700.7	ENST00000228140.6	491	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	6218.06489512614	5576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	-16938685	True	NA	31	True	AATAAA	-19	NA	17077666	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075164_17075453_17075624_17077167_17077247_17077428_17077478_17077618
transcript_22604.known	chr11	-	664	5	FSM	ENSG00000110700.7	ENST00000525828.1	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	12545	junction_1	2033.15596733256	14263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGCATGTTTCATATTTA	-16938687	True	NA	27	True	AATAAA	-15	NA	17077668	17074392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428
transcript_22605.nic	chr11	-	1815	5	ISM	ENSG00000011405.14	ENST00000533645.1	2101	6	-52	7195	-13	-7195	5prime_fragment	FALSE	canonical	3	232	junction_2	29.4310635213884	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTCTAAGATGTCATGT	-17193658	True	NA	NA	False	AATAAA	-17	NA	17207999	17148516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_17148788_17150497_17150656_17155525_17155630_17168676_17169807_17207847
transcript_22608.known	chr11	-	584	3	FSM	ENSG00000011405.14	ENST00000532035.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATTTTAGACCTACTAT	-17193609	True	NA	NA	False	NA	NA	NA	17207950	17169351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17169807_17194388_17194415_17207847
transcript_22612.nnic	chr11	-	1119	8	Fusion	ENSG00000110700.7_ENSG00000011405.14	novel	527	6	NA	NA	13476	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7232.61157563999	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	31	True	AATAAA	-19	NA	17194444	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077624_17193443_17193557_17193920
transcript_22616.nnic	chr11	-	1128	8	Fusion	ENSG00000110700.7_ENSG00000011405.14	novel	527	6	NA	NA	13476	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7232.61157563999	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	31	True	AATAAA	-19	NA	17194444	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077633_17193443_17193557_17193920
transcript_2262.known	chr1	-	406	2	FSM	ENSG00000238142.3	ENST00000422124.1	406	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTTGGTTTTATCATTTTAT	-16889342	False	NA	0	True	AATAAA	-31	NA	16889373	16888537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888786_16889215
transcript_22624.nnic	chr11	-	1272	8	Fusion	ENSG00000110700.7_ENSG00000011405.14	novel	561	6	NA	NA	13476	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7232.61157563999	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	31	True	AATAAA	-19	NA	17194444	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077757_17193423_17193557_17193920
transcript_22626.nnic	chr11	-	1288	8	Fusion	ENSG00000110700.7_ENSG00000011405.14	novel	561	6	NA	NA	13476	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7232.61157563999	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	31	True	AATAAA	-19	NA	17194444	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077762_17193412_17193557_17193920
transcript_22628.nnic	chr11	-	1259	8	Fusion	ENSG00000110700.7_ENSG00000011405.14	novel	561	6	NA	NA	13476	0	multi-exon	FALSE	non_canonical	0	0	junction_6	7232.61157563999	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTCATATTTATTTT	NA	False	NA	31	True	AATAAA	-19	NA	17194444	17074388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_-_17074467_17075096_17075198_17075453_17075624_17077167_17077247_17077428_17077478_17077618_17077762_17193441_17193557_17193920
transcript_2263.known	chr1	-	527	2	FSM	ENSG00000238142.3	ENST00000660464.2	556	2	25	4	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889470	False	NA	-4	True	AATAAA	-27	NA	16889501	16888541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888783_16889215
transcript_22639.nic	chr11	+	1668	14	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-28	1	combination_of_known_junctions	TRUE	canonical	3	20	junction_1	49.6489451195017	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275040	True	NA	NA	False	AATAAA	-14	NA	17276702	17331523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_17276849_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_2264.known	chr1	-	336	2	FSM	ENSG00000238142.3	ENST00000416869.2	391	2	51	4	-4	0	multi-exon	FALSE	canonical	3	44	junction_1	0	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889611	False	NA	-4	True	AATAAA	-27	NA	16889642	16888541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888783_16889547
transcript_22641.nic	chr11	+	1644	14	NIC	ENSG00000070081.18	novel	937	8	NA	NA	-10	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	54.074679896576	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	17275311	False	NA	NA	False	AATAAA	-14	NA	17276973	17331523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_17277096_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_2265.nnic	chr1	-	828	2	FSM	ENSG00000238142.3	ENST00000690818.1	845	2	15	2	-2	0	multi-exon	FALSE	canonical	3	10	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889472	False	NA	-4	True	AATAAA	-27	NA	16889503	16888541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888786_16888919
transcript_22650.known	chr11	+	534	5	FSM	ENSG00000070081.18	ENST00000533738.6	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	81.2692284939386	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTCAGAGAAAAGCTCCA	17275078	True	NA	-18	True	GATAAA	-1	NA	17276740	17296166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17276829_17282788_17282944_17286633_17286718_17295323_17295468_17296103
transcript_22651.known	chr11	+	1905	13	FSM	ENSG00000070081.18	ENST00000323688.10	1905	13	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_7	20.8424979842202	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCTTTTTTCCAACA	17275078	True	NA	NA	False	AATAAA	-24	NA	17276740	17331390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17276829_17282788_17282944_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901
transcript_22652.known	chr11	+	937	8	FSM	ENSG00000070081.18	ENST00000529313.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	90.5423567582982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAAGAAAAGAGAAAAGAA	17276973	False	NA	NA	False	TTTAAA	-9	NA	17276983	17310927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17277096_17282788_17282944_17286633_17286718_17295323_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824
transcript_22653.known	chr11	+	1369	12	ISM	ENSG00000070081.18	ENST00000529010.6	2300	14	18583	688	-15598	1	3prime_fragment	FALSE	canonical	3	151	junction_5	20.8163953183443	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	17295321	17331523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17315385_17315476_17330126_17330298_17330901_17330984_17331411
transcript_22654.known	chr11	+	1279	11	NIC	ENSG00000070081.18	novel	2300	14	NA	NA	-15598	1	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	55.1666565961723	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTGAAATAAAGGGAGAT	NA	False	NA	NA	False	AATAAA	-14	NA	17295321	17331523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_17295468_17296103_17296212_17301743_17301871_17309571_17309676_17310824_17311011_17311192_17311284_17311871_17311931_17312027_17312121_17330126_17330298_17330901_17330984_17331411
transcript_22656.known	chr11	+	472	2	FSM	ENSG00000287898.1	ENST00000666786.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCTCATGGAGTTGTT	NA	False	NA	NA	False	AATAAA	-24	NA	17476930	17492367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_17477055_17492019
transcript_22657.known	chr11	-	2149	20	FSM	ENSG00000006611.17	ENST00000526313.5	2149	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	2.77902711209349	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTGAGTGTGGATTTG	-17544231	True	NA	1	True	AATAAA	-22	NA	17544402	17493894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17494377_17496757_17496814_17498161_17498272_17501050_17501151_17501481_17501536_17501938_17501981_17520869_17520995_17521345_17521412_17522783_17522927_17523210_17523268_17523418_17523479_17524450_17524536_17526346_17526442_17526752_17526811_17527015_17527041_17527222_17527332_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_2266.known	chr1	-	346	2	FSM	ENSG00000238142.3	ENST00000457075.1	346	2	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	0	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889618	False	NA	-4	True	AATAAA	-27	NA	16889649	16888541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888786_16889547
transcript_22660.nnic	chr11	-	771	5	NNC	ENSG00000006611.17	novel	2149	20	NA	NA	-13	-7760	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.30116263352131	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTGTCTACCTCGTCAGG	-17544258	True	NA	NA	False	TATAAA	-15	NA	17544429	17530642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_17530905_17531153_17531293_17531398_17531543_17533254_17533323_17544271
transcript_22661.known	chr11	-	1194	1	FSM	ENSG00000006611.17	ENST00000624811.1	1194	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATAGGAGTGAGTGTGG	NA	False	NA	-4	True	AATAAA	-17	NA	17495093	17493899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17493900_17495100
transcript_2267.known	chr1	-	1048	1	FSM	ENSG00000238142.3	ENST00000666544.1	1048	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGTTGGTTTTATCATT	-16889558	False	NA	-4	True	AATAAA	-27	NA	16889589	16888541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16888500_16889600
transcript_22675.nic	chr11	-	1536	12	NIC	ENSG00000129158.11	novel	1525	12	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_10	52.4802993339579	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011048	True	NA	-10	True	AATAAA	-20	NA	18012963	17788047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18010070_18010140_18012850
transcript_2268.known	chr1	+	164	1	FSM	ENSG00000207005.1	ENST00000384278.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTCTGGAGTTTCTAAAA	16895772	False	NA	NA	False	NA	NA	NA	16895979	16896143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_16896000_16896100
transcript_22687.nic	chr11	-	1460	11	NIC	ENSG00000129158.11	novel	1451	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_10	41.0945251828026	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011041	True	NA	-10	True	AATAAA	-20	NA	18012956	17788047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_22688.known	chr11	-	1451	11	FSM	ENSG00000129158.11	ENST00000265965.10	1451	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_10	34.0360103419893	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011132	True	NA	-10	True	AATAAA	-20	NA	18013047	17788047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17959469_17959637_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_2269.known	chr1	-	438	1	FSM	ENSG00000272426.1	ENST00000606899.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCCCTTTAGATGAAAAG	-16904703	True	NA	NA	False	AATAAA	-21	NA	16904776	16904338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16904300_16904800
transcript_22691.known	chr11	-	1314	11	FSM	ENSG00000129158.11	ENST00000527494.5	1314	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	68.1501283931292	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18012883	False	NA	-10	True	AATAAA	-20	NA	18012898	17788047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_17999493_17999573_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_22710.nic	chr11	-	1293	10	NIC	ENSG00000129158.11	novel	1314	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	47.3523696722798	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCCAGAGAATTGTTT	-18011041	True	NA	-10	True	AATAAA	-20	NA	18012956	17788047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012850
transcript_22711.known	chr11	-	1264	10	FSM	ENSG00000129158.11	ENST00000528200.5	1264	10	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	40.6988336654553	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTCCCAGAGAATTGTT	-18011113	True	NA	-11	True	AATAAA	-19	NA	18013028	17788048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_17788414_17878207_17878245_17988596_17988756_17992930_17992994_17995795_17995910_18000496_18000558_18004440_18004536_18006590_18006747_18007940_18008077_18012950
transcript_2273.known	chr1	-	1045	9	FSM	ENSG00000117122.14	ENST00000375535.4	1045	9	0	0	0	0	multi-exon	FALSE	canonical	3	3304	junction_8	298.350360314849	3465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964397	True	NA	NA	False	ATTAAA	-18	NA	16980620	16974501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977199_16978236_16978315_16980586
transcript_2274.known	chr1	-	970	8	FSM	ENSG00000117122.14	ENST00000375534.7	970	8	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_7	1168.7586647065	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16978266	False	16223	NA	False	ATTAAA	-18	NA	16978276	16974501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16976795_16976896_16976924_16977108_16977196_16978236
transcript_22745.known	chr11	-	1526	12	FSM	ENSG00000166788.10	ENST00000531581.5	1526	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.209217952048	1249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTGAAATTGACTTATTG	-18100393	True	NA	-6	True	AATAAA	-19	NA	18106087	18080344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083729_18086861_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_2275.known	chr1	-	2371	6	FSM	ENSG00000117122.14	ENST00000490075.5	2371	6	0	0	0	0	multi-exon	FALSE	canonical	3	3304	junction_5	363.467192467216	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCAAGTCACTTTTTCGGT	-16964398	True	NA	NA	False	ATTAAA	-18	NA	16980621	16974501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_16975024_16975268_16975343_16975642_16975731_16976500_16976546_16976707_16978315_16980586
transcript_22755.nic	chr11	-	1369	11	NIC	ENSG00000166788.10	novel	1518	12	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	171.178298858237	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGAAATTGACTTATTGG	NA	False	NA	-5	True	AATAAA	-20	NA	18106127	18080343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_18080492_18081410_18081504_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_22767.known	chr11	-	451	5	FSM	ENSG00000166788.10	ENST00000532452.5	451	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	257.00328305296	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACAGTTGAAATTGACTT	-18100325	True	NA	-10	True	AATAAA	-15	NA	18106019	18080348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083547_18103256_18103347_18105906
transcript_22770.known	chr11	-	1573	12	FSM	ENSG00000166788.10	ENST00000524803.6	1573	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	166.209217952048	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGGTGTTAACATTTT	-18100388	True	NA	47	True	ACTAAA	-19	NA	18106082	18080291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410_18081504_18083534_18083732_18086865_18087055_18087142_18087226_18089329_18089511_18090174_18090291_18090433_18090494_18092244_18092325_18096770_18096855_18103232_18103347_18105906
transcript_22771.known	chr11	-	471	2	FSM	ENSG00000166788.10	ENST00000530237.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAGTTGAAATTGACTTA	-18081725	False	NA	-9	True	AATAAA	-16	NA	18081737	18080347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18080492_18081410
transcript_22772.known	chr11	-	576	4	FSM	ENSG00000134339.9	ENST00000256733.9	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGAAACAGTGTGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	18248668	18245239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18245516_18245909_18246049_18247920_18248016_18248602
transcript_22773.known	chr11	+	1110	1	FSM	ENSG00000212789.4	ENST00000526214.1	1110	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCCTTCTGATAAATAAAG	NA	False	NA	NA	False	AGTAAA	-31	NA	18261981	18263091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18262000_18263100
transcript_22774.known	chr11	+	518	4	FSM	ENSG00000173432.13	ENST00000356524.9	518	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGAAACTGGGTGTTA	NA	False	NA	NA	False	AATAAA	-17	NA	18266263	18269967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18266297_18266883_18266979_18269194_18269334_18269716
transcript_22775.known	chr11	-	4725	22	FSM	ENSG00000110756.18	ENST00000396253.7	4725	22	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_21	18.1299166449	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTTTTGCATTTATAAC	-18320522	True	NA	10	True	AGTAAA	-26	NA	18322174	18278667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18279943_18281949_18282221_18283794_18283902_18285345_18285460_18286590_18286711_18287534_18287691_18287892_18288014_18291441_18292020_18292898_18292977_18295019_18295170_18295998_18296123_18296797_18296985_18297558_18297718_18298791_18298971_18300827_18300917_18305421_18305494_18306134_18306348_18308945_18309080_18310740_18310934_18311386_18311452_18311913_18312025_18321945
transcript_22782.known	chr11	+	3012	15	FSM	ENSG00000110768.12	ENST00000265963.9	3012	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	18.61437342376	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATCTCTGGTTTCTCATT	18319860	True	NA	33	True	AGTAAA	-30	NA	18322566	18367045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_22795.nic	chr11	+	2157	9	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	7	11939	-3	0	5prime_fragment	FALSE	canonical	3	112	junction_5	19.1143761342085	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAATTTCTTTCATTTA	18319857	True	NA	4	True	AATAAA	-15	NA	18322563	18348831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831
transcript_22798.nic	chr11	+	1216	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	9	18974	-1	-162	5prime_fragment	FALSE	canonical	3	112	junction_5	18.2642638322308	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTGTGAGTTGCTAAA	18319859	True	NA	NA	False	ATTAAA	-21	NA	18322565	18341796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_22799.nic	chr11	+	1381	7	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	9	18809	-1	3	5prime_fragment	FALSE	canonical	3	112	junction_5	18.2642638322308	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTTGATTGCTTACTA	18319859	True	NA	NA	False	AATAAA	-17	NA	18322565	18341961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527
transcript_22804.nic	chr11	+	1042	4	ISM	ENSG00000110768.12	ENST00000418116.6	1822	14	-281	22447	-19	2419	5prime_fragment	FALSE	canonical	3	127	junction_1	16.3571255285137	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTCTTAAGACCATTA	18321995	True	NA	NA	False	AATAAA	-15	NA	18322275	18338323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108
transcript_22805.nnic	chr11	+	1295	3	NNC	ENSG00000110768.12	novel	2587	14	NA	NA	0	-978	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	62.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTGTCTCAGTAATG	18319860	True	NA	6	True	AATAAA	-22	NA	18322566	18334906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_18322741_18333059_18333229_18333954
transcript_22806.known	chr11	+	568	2	FSM	ENSG00000110768.12	ENST00000526461.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACACACTTTAAGAGTTG	18319861	True	NA	NA	False	NA	NA	NA	18322567	18333454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18333059
transcript_22808.known	chr11	+	2587	14	FSM	ENSG00000110768.12	ENST00000534641.5	2587	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.708550680698	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTTTTCTCTAGTATT	18319860	True	NA	2	True	AATAAA	-14	NA	18322566	18366813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18333059_18333229_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614_18360708_18365782
transcript_22809.known	chr11	+	1822	14	FSM	ENSG00000110768.12	ENST00000418116.6	1822	14	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_9	19.0983130702734	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTCATGTAAATGA	18319850	True	NA	NA	False	AGTAAA	-14	NA	18322556	18360770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18322741_18333059_18333229_18335753_18335947_18338108_18338275_18339563_18339658_18341260_18341411_18341527_18341608_18347587_18347716_18347831_18347920_18351880_18351970_18352328_18352447_18357951_18358043_18358524_18358641_18360614
transcript_2281.known	chr1	-	1015	8	FSM	ENSG00000117118.10	ENST00000375499.8	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	953	junction_4	43.7539502589801	6692	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCTGTTCCTTTACTTGC	-17044069	True	NA	NA	False	AATAAA	-31	NA	17054032	17018721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_17018959_17022607_17022731_17023972_17024075_17027748_17027866_17028599_17028737_17033059_17033146_17044760_17044889_17053947
transcript_22810.known	chr11	+	1922	8	FSM	ENSG00000134333.14	ENST00000379412.9	1922	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	3154.34847246056	2248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTTTGGTTAATTCATTA	18396208	False	NA	20	True	AATAAA	-14	NA	18396277	18407847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18396611_18396818_18396969_18399430_18399549_18400836_18401011_18402839_18403014_18403693_18403812_18405448_18405573_18407116
transcript_22812.known	chr11	+	576	5	FSM	ENSG00000134333.14	ENST00000543445.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	3698.57195414663	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGGAAGCGGTTGCA	18286632	True	NA	NA	False	NA	NA	NA	18394559	18402891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18394642_18396818_18396969_18399430_18399549_18400836_18401011_18402839
transcript_22813.known	chr11	+	2035	8	FSM	ENSG00000166796.12	ENST00000541669.6	2035	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.48461497791618	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGATTTGGTGTCTCAA	18412299	True	NA	NA	False	TATAAA	-7	NA	18412317	18452063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412409_18412708_18412844_18415183_18415302_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_22815.known	chr11	+	1092	7	FSM	ENSG00000166796.12	ENST00000396215.7	1092	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	18412304	True	NA	NA	False	AATAAA	-18	NA	18412322	18451243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18438527_18438646_18446209_18446334_18450962
transcript_22817.known	chr11	+	813	5	FSM	ENSG00000166796.12	ENST00000545848.5	813	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6393596310755	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAACTCTAGTCTCTC	18412341	False	NA	NA	False	AATAAA	-18	NA	18412359	18451243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18412409_18412708_18412844_18429736_18429911_18434739_18434914_18450962
transcript_2282.known	chr1	-	1607	11	FSM	ENSG00000117115.13	ENST00000375481.1	1607	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5.13906606301184	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGTGTATAATGAGATT	-17118967	False	NA	NA	False	AATAAA	-20	NA	17119435	17079030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_17079416_17082544_17082653_17083725_17083838_17084598_17084703_17086520_17086700_17092407_17092534_17093566_17093685_17095908_17095971_17102986_17103060_17104877_17105062_17119279
transcript_22828.known	chr11	-	1534	10	FSM	ENSG00000074319.13	ENST00000251968.4	1534	10	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_6	31.5211079582171	2650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCCTTTATTGGA	-18515566	True	NA	-15	True	AATAAA	-14	NA	18526942	18480310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18480636_18481629_18481870_18483869_18484073_18502485_18502578_18506856_18506924_18509541_18509666_18514677_18514842_18516098_18516165_18519518_18519604_18526774
transcript_22833.known	chr11	-	4207	12	FSM	ENSG00000151116.17	ENST00000396197.8	4207	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	12.6810850227956	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGAGATGCTTCATTTAT	-18587701	True	NA	-1	True	AATAAA	-16	NA	18588734	18529608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22837.known	chr11	-	1848	11	FSM	ENSG00000151116.17	ENST00000379387.8	1848	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	14.277604841149	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTACTAATGTTTCTTGTG	-18587673	True	NA	NA	False	NA	NA	NA	18588706	18531873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_22838.known	chr11	-	1354	11	FSM	ENSG00000151116.17	ENST00000396196.6	1354	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	16.3033738839542	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAAAGTCATTTAATTTT	-18587684	True	NA	NA	False	NA	NA	NA	18588717	18532280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18534329_18534454_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18575346_18575413_18578723_18578809_18588612
transcript_2284.known	chr1	+	3189	16	FSM	ENSG00000142619.4	ENST00000375460.3	3189	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.21710521977545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGGCTCTCATGTTGA	17248866	True	NA	28	True	AATAAA	-17	NA	17249097	17284233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_17249230_17259577_17259759_17262132_17262206_17265658_17265721_17266718_17266837_17267836_17267963_17270232_17270412_17270878_17270983_17271066_17271179_17273339_17273448_17274634_17274787_17276518_17276664_17276773_17276877_17280349_17280430_17280670_17280797_17282845
transcript_22842.known	chr11	-	2503	11	FSM	ENSG00000151116.17	ENST00000543987.5	2503	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	15.2052622469986	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTATTAAGGGGCACTT	-18587713	True	NA	NA	False	TATAAA	-31	NA	18588746	18531200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22847.known	chr11	-	1799	10	FSM	ENSG00000151116.17	ENST00000320750.10	1799	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	16.6740724287147	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTTACATGCACTTTA	-18587653	True	NA	-81	True	NA	NA	NA	18588686	18531778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18532488_18536405_18536470_18544622_18544797_18546879_18547051_18558227_18558331_18564891_18565011_18566346_18566483_18570213_18570378_18578723_18578809_18588612
transcript_22854.known	chr11	-	995	7	FSM	ENSG00000151116.17	ENST00000300038.7	995	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.1797859605175	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTTGTTTTCTCATCTG	-18587648	True	NA	NA	False	AATAAA	-21	NA	18588681	18563645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18564002_18564891_18565011_18566346_18566483_18570213_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22858.known	chr11	-	724	4	FSM	ENSG00000151116.17	ENST00000535340.5	724	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCCTATTACAGATTTTTA	-18587672	True	NA	NA	False	NA	NA	NA	18588705	18569897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18570378_18575346_18575413_18578723_18578809_18588612
transcript_22859.known	chr11	-	5601	6	FSM	ENSG00000179119.15	ENST00000336349.6	5601	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	9.17387595294377	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGCTGGTTTGCATT	-18632507	True	NA	-7	True	ATTAAA	-14	NA	18634342	18606402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18609955_18611476_18611555_18612313_18612489_18614562_18616099_18616874_18616990_18634197
transcript_2286.known	chr1	+	2267	16	FSM	ENSG00000159339.13	ENST00000375448.4	2267	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.4	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAGATGTTGTTGGTAT	NA	False	NA	NA	False	AATAAA	-27	NA	17308196	17364004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_17308315_17330968_17331150_17333942_17334010_17336158_17336227_17338037_17338156_17339687_17339814_17341942_17342122_17342298_17342403_17346027_17346140_17347940_17348049_17354532_17354688_17355982_17356128_17356356_17356460_17358837_17358909_17359279_17359409_17363521
transcript_22863.nnic	chr11	+	453	4	NIC	ENSG00000247595.5	novel	493	4	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.84754619472471	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	18588374	True	NA	33	True	CATAAA	-15	NA	18588781	18603883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_18588996_18601091_18601181_18603157_18603196_18603771
transcript_22864.nnic	chr11	+	398	3	NIC	ENSG00000247595.5	novel	493	4	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	2.5	247	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCATATTTTATGTTA	18588340	True	NA	33	True	CATAAA	-15	NA	18588747	18603883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_18588996_18603157_18603196_18603771
transcript_22866.nic	chr11	-	330	2	ISM	ENSG00000179119.15	ENST00000536336.5	2167	4	-23	4710	-23	-1102	5prime_fragment	FALSE	canonical	3	70	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTATCTATAGCCTTAT	-18632577	True	NA	NA	False	NA	NA	NA	18634412	18616874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_18616990_18634197
transcript_22868.known	chr11	-	3091	15	FSM	ENSG00000110786.18	ENST00000358540.7	3091	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_5	6.14327241121272	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGGGTCTGTGTGATT	-18791348	True	NA	-1	True	AATAAA	-24	NA	18791798	18727927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18771938_18772072_18791524
transcript_22869.known	chr11	-	2796	14	FSM	ENSG00000110786.18	ENST00000396168.1	2796	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_13	10.6914775549356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAACCTCCTGGGTCTGTGT	-18791624	False	NA	-5	True	AATAAA	-20	NA	18791640	18727931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_18729028_18729452_18729567_18729657_18729819_18732591_18732703_18733234_18733373_18733555_18733636_18737879_18737965_18740602_18740793_18742261_18742504_18742991_18743076_18743321_18743430_18744005_18744200_18765806_18765884_18791524
transcript_22871.nnic	chr11	+	830	5	NNC	ENSG00000254966.1	novel	874	3	NA	NA	-56	-31461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.27760839478607	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTCTCAGTGAACT	18706364	True	NA	25	True	ATTAAA	-14	NA	18706480	18709107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_18706706_18706936_18707150_18707277_18707394_18708408_18708501_18708923
transcript_22872.nnic	chr11	+	1064	4	NNC	ENSG00000254966.1	novel	874	3	NA	NA	-59	-31461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.62466929133727	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTCTCAGTGAACT	18706361	True	NA	25	True	ATTAAA	-14	NA	18706477	18709107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_18707150_18707277_18707394_18708408_18708501_18708923
transcript_22874.nnic	chr11	+	1253	4	NNC	ENSG00000254966.1	novel	874	3	NA	NA	-56	-31461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.49443825784929	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTCTCAGTGAACT	18706364	True	NA	25	True	ATTAAA	-14	NA	18706480	18709107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_18706706_18706936_18707150_18707277_18707394_18708408
transcript_22876.known	chr11	+	3607	3	FSM	ENSG00000151117.9	ENST00000280734.3	3607	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGGTAGCTTACTA	18698703	True	NA	NA	False	TATAAA	-18	NA	18698778	18704785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_18698908_18700932_18701198_18701572
transcript_22877.nnic	chr11	+	1487	3	NNC	ENSG00000254966.1	novel	874	3	NA	NA	-59	-31461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGTGGTCTCAGTGAACT	18706361	True	NA	25	True	ATTAAA	-14	NA	18706477	18709107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_18707150_18707277_18707394_18708408
transcript_2288.known	chr1	-	4040	13	FSM	ENSG00000179051.14	ENST00000375436.9	4040	13	0	0	0	0	multi-exon	FALSE	canonical	3	1233	junction_12	184.315004363002	1134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGATTTTGCATTTCTTTT	-17417342	True	NA	-11	True	AATAAA	-21	NA	17439677	17406759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_17409195_17409973_17410052_17412121_17412195_17413072_17413179_17413536_17413718_17416479_17416647_17420713_17420829_17422202_17422292_17422704_17422837_17425540_17425685_17429105_17429200_17438229_17438523_17439544
transcript_22887.known	chr11	+	2406	17	FSM	ENSG00000177054.14	ENST00000446113.7	2406	17	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_2	52.4782320943646	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111273	True	NA	13	True	AATAAA	-16	NA	19117167	19176415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_19117277_19142977_19143124_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_22899.known	chr11	+	2283	16	FSM	ENSG00000177054.14	ENST00000399351.7	2283	16	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_1	69.9709145923425	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGACTTGGTTTCTGAC	19111250	True	NA	13	True	AATAAA	-16	NA	19117144	19176415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19166386_19170410_19170569_19172722_19172821_19175821
transcript_2290.known	chr1	+	1841	3	FSM	ENSG00000117148.8	ENST00000375406.2	1841	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	2	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	17755194	True	NA	19	True	AATAAA	-19	NA	17755332	17827063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_17755505_17822984_17823357_17825766
transcript_2291.nnic	chr1	+	1867	3	NNC	ENSG00000117148.8	novel	1670	2	NA	NA	3956	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	2	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCTCCTGTGATGGAT	17759233	True	NA	19	True	AATAAA	-19	NA	17759288	17827063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_17759487_17822984_17823357_17825766
transcript_22911.known	chr11	+	6304	15	FSM	ENSG00000177054.14	ENST00000525490.5	6304	15	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	72.4218086445439	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTTTCTGACACTTAAC	19111261	True	NA	20	True	AATAAA	-23	NA	19117155	19176422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_19117277_19146180_19146304_19147595_19147674_19149186_19149332_19150726_19150792_19152157_19152321_19152558_19152685_19155795_19155930_19158939_19159041_19163302_19163428_19164300_19164364_19165051_19165146_19166301_19170569_19172722_19172821_19175821
transcript_22912.known	chr11	-	3706	13	FSM	ENSG00000129173.13	ENST00000250024.9	3706	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	14.1664215665072	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCATTTTCATTTCGCC	-19240128	False	817	NA	False	ATTAAA	-17	NA	19240945	19224062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19240547
transcript_22913.nic	chr11	-	918	5	ISM	ENSG00000129173.13	ENST00000527884.5	3432	13	-49	10811	-49	2473	5prime_fragment	FALSE	canonical	3	35	junction_4	16.3477827242718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATGAGCAAGAGTTTGA	-19240852	True	NA	NA	False	AAAAAG	-4	NA	19241669	19234873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241496
transcript_22914.known	chr11	-	3519	13	FSM	ENSG00000129173.13	ENST00000620009.4	3519	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	18.0662361572323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTTAGCATTTTCATTTC	-19240803	True	NA	NA	False	ATTAAA	-14	NA	19241620	19224065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_19224841_19225220_19225616_19225731_19225865_19229453_19229989_19230240_19230329_19230630_19230835_19232233_19232372_19234359_19234522_19234743_19235059_19237313_19237471_19237853_19238133_19240106_19240231_19241406
transcript_22919.nic	chr11	+	1615	2	ISM	ENSG00000166833.23	ENST00000530408.1	556	5	100	7606	100	-7606	internal_fragment	FALSE	canonical	3	19	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTATCAGAGTGTGGGAG	20022728	False	NA	NA	False	AAAAAG	-1	NA	20022944	20037385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_20023133_20035958
transcript_22925.known	chr11	+	886	6	FSM	ENSG00000109854.14	ENST00000421577.6	886	6	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	142.343247117663	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAATGATGGTGCTCTGCA	20359605	True	NA	-90	True	NA	NA	NA	20363722	20383334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363750_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_22927.known	chr11	+	967	6	FSM	ENSG00000109854.14	ENST00000443524.6	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	181.361076309113	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGTTATACATATAGATC	20359607	True	NA	-56	True	AAGAAA	-30	NA	20363724	20383368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363799_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_2293.known	chr1	+	1892	10	FSM	ENSG00000117154.12	ENST00000251296.4	1892	10	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_5	34.1731249542064	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGGTTTGTGGCTCTGCA	18104585	True	NA	16	True	ATTAAA	-23	NA	18107797	18378483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_18108199_18227897_18228011_18291865_18291988_18334891_18335011_18362114_18362231_18365222_18365698_18376309_18376396_18376799_18376993_18377392_18377432_18378255
transcript_22931.known	chr11	+	1477	6	FSM	ENSG00000109854.14	ENST00000419348.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	110.983602392426	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTGCCTCTTAGATTGCT	20359625	True	NA	15	True	AATAAA	-26	NA	20363742	20383782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363913_20364236_20364433_20367173_20367282_20376579_20376718_20382177_20382240_20382979
transcript_22938.known	chr11	+	713	3	FSM	ENSG00000109854.14	ENST00000530266.5	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	175	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCTTAATAAATGTTTG	20359567	True	NA	-25	True	AGTAAA	-36	NA	20363684	20367625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20363750_20364236_20364433_20367173
transcript_22941.known	chr11	+	774	2	FSM	ENSG00000109854.14	ENST00000532081.1	774	2	0	0	0	0	multi-exon	FALSE	canonical	3	511	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGTCTCACTTGAGTG	20363961	True	NA	5	True	AATAAA	-17	NA	20364140	20367655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20364433_20367173
transcript_22945.known	chr11	+	2552	16	FSM	ENSG00000185238.13	ENST00000331079.11	2552	16	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_10	24.3826896702467	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAATATTTCAACAGGGTA	20386621	True	NA	74	True	AATAAA	-19	NA	20387715	20509338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20387775_20388018_20388155_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_22949.known	chr11	+	2530	15	FSM	ENSG00000185238.13	ENST00000330796.9	2530	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	98.57787246018	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATATTATAAAAGTTTTC	20387123	False	NA	30	True	AATAAA	-43	NA	20387557	20509294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20387775_20389743_20389827_20392210_20392261_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_2295.nnic	chr1	-	1001	6	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_3	4.36348484585429	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	NA	False	NA	-17	True	AGTAAA	-2	NA	18298498	18289124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18290503_18290631_18291054_18291127_18291738_18291800_18295686_18295763_18298239
transcript_22950.known	chr11	+	1736	14	FSM	ENSG00000185238.13	ENST00000437750.2	1736	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	138.904292111021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATATTTGGAAGAGAGAT	20386621	True	NA	NA	False	NA	NA	NA	20387715	20508708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20387775_20389743_20389827_20392896_20393000_20395802_20395963_20397576_20397722_20402918_20402985_20407910_20408033_20426765_20426866_20452129_20452209_20461979_20462168_20464459_20464547_20493918_20493970_20494166_20494255_20508303
transcript_22951.nic	chr11	+	752	3	ISM	ENSG00000185238.13	ENST00000331079.11	2552	16	-137	119175	21	-2088	5prime_fragment	FALSE	canonical	3	386	junction_1	6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGAAATATAAGTTCAG	20387439	False	NA	NA	False	NA	NA	NA	20387578	20390163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_20387775_20388018_20388155_20389743
transcript_22952.known	chr11	+	2400	19	FSM	ENSG00000165973.19	ENST00000532434.5	2400	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.30188015169021	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACGTGATTAAGGATAG	20669555	True	NA	NA	False	NA	NA	NA	20669660	21575067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_20669779_20677931_20678061_20783679_20783831_20847582_20847754_20885443_20885541_20918181_20918255_20919251_20919335_20927307_20927443_20928376_20928480_20937785_20937860_20947335_20947436_20960431_20960561_21113588_21113715_21229331_21229455_21370852_21370949_21560188_21560383_21570763_21570941_21573184_21573410_21574971
transcript_22954.known	chr11	+	1942	12	FSM	ENSG00000171714.13	ENST00000683834.1	1942	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	10.4185149875332	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACAGACATTGAAATGAT	22193217	True	NA	NA	False	TATAAA	-1	NA	22193247	22255932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22193533_22203803_22203851_22211266_22211315_22221096_22221211_22225983_22226053_22227301_22227587_22236162_22236277_22239568_22239685_22250236_22250372_22250740_22250847_22250950_22251012_22255370
transcript_22957.known	chr11	+	749	4	FSM	ENSG00000171714.13	ENST00000683897.1	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTCTTCTTCCAAGTA	22193190	False	NA	NA	False	NA	NA	NA	22193206	22221421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22193533_22203803_22203851_22211263_22211315_22221096
transcript_22960.known	chr11	+	2286	8	FSM	ENSG00000148935.12	ENST00000454584.7	2236	8	4	-54	4	54	multi-exon	FALSE	canonical	0	0	junction_7	2.71052370871575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTCCAACAGTTATAAG	NA	False	NA	NA	False	NA	NA	NA	22666614	22813055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22666900_22674849_22675015_22685667_22685790_22726291_22726434_22737704_22737769_22749119_22749262_22755845_22755954_22811797
transcript_22963.known	chr11	+	895	1	FSM	ENSG00000148935.12	ENST00000648096.1	895	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAAAGGAACAAAATTTTAC	22625463	False	NA	NA	False	AATAAA	-23	NA	22625508	22626403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_22625500_22626400
transcript_22969.known	chr11	-	4479	4	FSM	ENSG00000198168.9	ENST00000354193.5	4479	4	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	21.4527905462721	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATTGTATGTTTTTGG	-22827976	True	NA	NA	False	AATAAA	-17	NA	22829801	22818926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829694
transcript_2297.nnic	chr1	-	1122	6	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_3	3.57770876399966	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	NA	False	NA	-17	True	AGTAAA	-2	NA	18298498	18289124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18290503_18290631_18291054_18291248_18291738_18291800_18295686_18295763_18298239
transcript_22970.known	chr11	-	549	4	FSM	ENSG00000198168.9	ENST00000530199.5	549	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	99.569071503153	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAATGGAACTAAATAG	-22827548	False	NA	16	True	NA	NA	NA	22829373	22822866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_22823134_22827206_22827321_22827823_22827875_22829256
transcript_22974.known	chr11	-	879	5	FSM	ENSG00000254560.6	ENST00000530430.1	879	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.41130192063036	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTATGCTGGTCCATC	-27219900	True	NA	NA	False	NA	NA	NA	27220086	27063019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27219686
transcript_22975.known	chr11	-	583	5	FSM	ENSG00000254560.6	ENST00000525302.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGCCCTTCTACAACAC	-27219927	True	NA	NA	False	NA	NA	NA	27220113	27062982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27063061_27066491_27066663_27151049_27151153_27217316_27217481_27220046
transcript_22985.nnic	chr11	-	779	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-58	80	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_2	7.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	27220171	27217040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27217481_27219686_27219816_27219961
transcript_22986.nnic	chr11	-	716	3	NNC	ENSG00000254560.6	novel	745	2	NA	NA	-80	80	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_1	0	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTAGAAGAGTGTCTGG	NA	False	NA	NA	False	ATTAAA	-15	NA	27220193	27217040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_27217481_27219686_27219816_27220046
transcript_22988.known	chr11	-	745	2	FSM	ENSG00000254560.6	ENST00000531363.1	745	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGTTCAGCAATTAAACT	-27219916	True	NA	NA	False	NA	NA	NA	27220102	27217151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27217481_27219686
transcript_22993.known	chr11	-	1452	6	FSM	ENSG00000109881.17	ENST00000328697.11	1452	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	28.7012194862866	1808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTATATTGTTACTAG	-27359059	True	NA	-15	True	AATAAA	-20	NA	27363215	27338511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27339036_27340695_27340838_27341391_27341551_27350331_27350440_27357402_27357542_27362835
transcript_22994.known	chr11	-	2109	3	FSM	ENSG00000109881.17	ENST00000317945.6	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_1	6	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTCTGCAGAACTCTTG	-27359078	True	NA	NA	False	AATAAA	-19	NA	27363234	27348868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27350440_27357402_27357542_27362835
transcript_22995.known	chr11	+	279	1	FSM	ENSG00000242527.1	ENST00000496450.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	78	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCTTCTACTCTTTGAG	NA	False	NA	NA	False	NA	NA	NA	27483849	27484128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_27483800_27484100
transcript_22997.known	chr11	-	4842	5	FSM	ENSG00000148943.12	ENST00000278193.7	4842	5	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	26.688012290165	307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTGTGTTATTTCAAG	-27490310	True	NA	-17	True	CATAAA	-15	NA	27506769	27494417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27498805_27499358_27499569_27501494_27501567_27501801_27501921_27506715
transcript_23.known	ERCC-00053	+	1007	1	FSM	ERCC-00053A	DQ516785	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	197	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00053_+_0_1000
transcript_23007.known	chr11	+	2303	2	FSM	ENSG00000245573.9	ENST00000666532.1	2303	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATAGTGGCAAAGAAGT	NA	False	NA	NA	False	AAAACA	-5	NA	27506829	27515234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_27506899_27513000
transcript_23023.known	chr11	-	786	3	FSM	ENSG00000254934.5	ENST00000527083.5	786	3	0	0	0	0	multi-exon	FALSE	canonical	3	642	junction_1	691	3114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCGTCTTTAATATTTTT	-27587646	True	NA	-30	True	AATAAA	-16	NA	27634522	27617625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27618024_27623949_27624146_27634330
transcript_23024.known	chr11	-	3878	2	FSM	ENSG00000176697.20	ENST00000533131.5	3878	2	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-27699654	False	1235	NA	False	CATAAA	-2	NA	27699667	27654892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27699482
transcript_23025.known	chr11	-	3918	2	FSM	ENSG00000176697.20	ENST00000530861.5	3918	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGGTTCTGGGTTTTT	-27700887	True	NA	NA	False	CATAAA	-2	NA	27700900	27654892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_27658586_27700675
transcript_23027.known	chr11	-	3417	17	FSM	ENSG00000121621.7	ENST00000263181.7	3417	17	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	24.5531948023063	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTCTTGTCTCATT	-28105164	True	NA	-4	True	ATTAAA	-19	NA	28108156	28020618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_28021283_28023740_28023851_28035386_28035495_28036216_28036665_28058925_28059162_28062394_28062517_28069258_28069424_28077006_28077170_28082855_28082969_28083168_28083244_28084631_28084809_28088523_28088722_28090616_28090728_28091408_28091514_28094642_28094801_28097622_28097994_28108063
transcript_2303.nnic	chr1	-	874	5	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	6	junction_2	4.65698400254929	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	NA	False	NA	-17	True	AGTAAA	-2	NA	18298498	18289124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18291054_18291127_18291738_18291800_18295686_18295763_18298239
transcript_23033.known	chr11	-	744	2	FSM	ENSG00000121621.7	ENST00000526288.1	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCAGTTTTCTCATAACCT	-28105153	True	NA	NA	False	ATTAAA	-22	NA	28108145	28097331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_28097994_28108063
transcript_23037.known	chr11	+	795	5	FSM	ENSG00000169519.21	ENST00000403099.5	795	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	64.0019530951986	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCGCAATGTTACAGGT	NA	False	NA	NA	False	NA	NA	NA	28108319	28125587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28108453_28110165_28110402_28113317_28113605_28123861_28123923_28125509
transcript_23043.known	chr11	+	718	4	FSM	ENSG00000169519.21	ENST00000634762.1	718	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	71.8903486027312	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAATAAAAGTTATTGTG	28108404	True	NA	NA	False	AATAAA	-17	NA	28110314	28145747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28110402_28113317_28113605_28134545_28134646_28145503
transcript_23044.known	chr11	+	4068	7	FSM	ENSG00000169519.21	ENST00000303459.10	4068	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	54.7479071137275	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGACTGCCTTCTATG	28108401	True	NA	19	True	AATAAA	-16	NA	28110311	28333507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28110402_28113317_28113605_28211061_28211199_28290205_28290398_28296752_28296932_28328094_28328166_28330395
transcript_23045.known	chr11	+	831	5	FSM	ENSG00000169519.21	ENST00000437814.1	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.963531591327	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGTAATTTTGAATATTT	28108404	True	NA	NA	False	ATTAAA	-20	NA	28110314	28125866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_28110402_28113317_28113605_28122141_28122181_28123861_28123923_28125509
transcript_23052.known	chr11	+	2373	4	FSM	ENSG00000152219.5	ENST00000282032.4	2373	4	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	38.8186667582606	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACTTTTCATTGTTAGCG	30318996	True	NA	8	True	AATAAA	-16	NA	30323103	30338223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_30323203_30330885_30331375_30332865_30332994_30336566
transcript_23058.nnic	chr11	+	488	3	NIC	ENSG00000152219.5	novel	2373	4	NA	NA	-18	-1414	combination_of_known_splicesites	FALSE	canonical	3	45	junction_1	125	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGGAGCCTTTAAAGGTC	30318978	True	NA	19	True	AATAAA	-27	NA	30323085	30336809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_30323203_30332865_30332994_30336566
transcript_23060.known	chr11	+	587	2	FSM	ENSG00000152219.5	ENST00000532047.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGAATTCTACCATGTAG	30319025	True	NA	NA	False	NA	NA	NA	30323132	30331402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_30323203_30330885
transcript_23061.known	chr11	-	2562	7	FSM	ENSG00000066382.17	ENST00000358117.10	2562	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.81881307912987	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGCTGTTTAGAGGGTT	-30586209	True	NA	1	True	AATAAA	-18	NA	30586353	30410223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_30411587_30414227_30414342_30417517_30417634_30495295_30495522_30535993_30536176_30580245_30580495_30586041
transcript_23081.known	chr11	-	795	7	FSM	ENSG00000148950.11	ENST00000278200.5	795	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	106.878045765567	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTAGTTGTTTTTAATT	-31506845	True	NA	-6	True	AATAAA	-14	NA	31509622	31432401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31473723_31473787_31509518
transcript_23107.known	chr11	-	733	6	FSM	ENSG00000148950.11	ENST00000532287.6	733	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	88.6191852817436	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506845	True	NA	-5	True	AATAAA	-15	NA	31509622	31432400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_2312.nnic	chr1	-	802	4	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	11	junction_1	2.94392028877595	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	NA	False	NA	-17	True	AGTAAA	-2	NA	18298498	18289124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18291738_18291800_18295686_18295763_18298239
transcript_23122.known	chr11	+	2970	5	FSM	ENSG00000170946.15	ENST00000465995.6	2970	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	20.994046775217	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGTGTTTTCTTTTAC	31367412	True	NA	7	True	AATAAA	-15	NA	31369859	31432835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31369913_31370715_31370860_31414810_31414950_31426286_31426356_31430270
transcript_2314.nnic	chr1	-	620	3	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	7	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTCCTCAAATTTATTC	-18298088	True	NA	-17	True	AGTAAA	-2	NA	18298377	18289124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18289531_18295686_18295763_18298239
transcript_23152.known	chr11	-	486	5	FSM	ENSG00000148950.11	ENST00000527184.5	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.5394935661866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATGGCATACTGCTAATG	-31506815	True	NA	NA	False	NA	NA	NA	31509592	31449029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31449092_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_23156.known	chr11	-	985	5	FSM	ENSG00000148950.11	ENST00000532624.5	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	40.0835065831322	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACTGCTTTATCAGAAA	-31506828	True	NA	NA	False	NA	NA	NA	31509605	31452544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31453093_31456259_31456387_31460625_31460715_31463171_31463306_31509518
transcript_2316.nnic	chr1	-	405	2	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCTAGCATTTACATGA	NA	False	NA	NA	False	AATAAA	-19	NA	18298517	18297765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18297893_18298239
transcript_23162.known	chr11	+	417	4	FSM	ENSG00000170946.15	ENST00000525511.5	417	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.6121078036982	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAATGAAGAGACAAAAAG	31367400	True	NA	NA	False	NA	NA	NA	31369847	31414906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31369913_31370715_31370860_31396282_31396395_31414810
transcript_2318.nnic	chr1	-	499	2	Antisense	novelGene_ENSG00000117154.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACCTAGCATTTACATGA	NA	False	NA	NA	False	AATAAA	-19	NA	18298420	18297765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_18298084_18298239
transcript_23182.nic	chr11	-	522	4	NIC	ENSG00000148950.11	novel	733	6	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	131.945274851188	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506857	True	NA	-5	True	AATAAA	-15	NA	31509634	31432400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_31432569_31433459_31433571_31456259_31456387_31509518
transcript_23184.known	chr11	-	469	4	FSM	ENSG00000148950.11	ENST00000526776.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	124.212184050787	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAGTTGTTTTTAATTG	-31506797	True	NA	-5	True	AATAAA	-15	NA	31509574	31432400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31463171_31463306_31509518
transcript_23196.known	chr11	+	2745	3	FSM	ENSG00000170946.15	ENST00000529086.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	4	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTTTTGAATACCGTTA	31367392	True	NA	NA	False	AATAAA	-18	NA	31369839	31417338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31369913_31370715_31370860_31414810
transcript_232.known	SIRV3	+	2467	5	FSM	SIRV3A	SIRV301	2467	5	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_3	662.96511974613	1869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1944	8939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4568_4780_6057_7989_8127_8208_8755
transcript_2320.known	chr1	+	491	2	FSM	ENSG00000225387.1	ENST00000420211.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTGACCCCAAGCCAAGCC	18385800	False	NA	NA	False	NA	NA	NA	18385828	18388514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_18386221_18388415
transcript_23200.known	chr11	-	314	3	FSM	ENSG00000148950.11	ENST00000533642.1	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	78.5	937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTTTTGACTTGATTA	-31506868	True	NA	-97	True	NA	NA	NA	31509645	31432492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31432569_31433459_31433571_31509518
transcript_23203.known	chr11	-	1067	3	FSM	ENSG00000148950.11	ENST00000528161.5	1067	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAACTCCCATGACACCA	-31506786	True	NA	NA	False	NA	NA	NA	31509563	31452197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31453093_31456259_31456387_31509518
transcript_23208.known	chr11	-	735	2	FSM	ENSG00000148950.11	ENST00000532668.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATAGACACCTATATT	-31506831	True	NA	NA	False	AATAAA	-12	NA	31509608	31477114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31477760_31509518
transcript_2321.known	chr1	+	5045	1	FSM	ENSG00000179023.9	ENST00000400664.3	5045	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACACACACCAAAAAAAAAA	18480909	False	NA	NA	False	AATAAA	-11	NA	18480929	18485974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_18480900_18486000
transcript_23210.known	chr11	-	122	2	FSM	ENSG00000148950.11	ENST00000533921.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTTTTTTTTCTGGA	-31506818	True	NA	NA	False	NA	NA	NA	31509595	31488196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31488242_31509518
transcript_23211.known	chr11	+	2456	2	FSM	ENSG00000109911.19	ENST00000638764.1	2456	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATCTAACCCATGTTCT	31507260	True	NA	NA	False	ATTAAA	-17	NA	31509766	31512584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31510369
transcript_23214.known	chr11	+	1392	10	FSM	ENSG00000109911.19	ENST00000640342.1	1392	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	68.0867275549046	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAACAACCATAAACAAA	31507263	True	NA	NA	False	ATTAAA	-10	NA	31509769	31719703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594902_31603764_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114_31650222_31719472
transcript_23215.known	chr11	+	1161	9	FSM	ENSG00000109911.19	ENST00000474374.5	1161	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.4696016141113	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAATTTTTATGTTT	31507264	True	NA	NA	False	ATTAAA	-23	NA	31509770	31650221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_31510008_31520055_31520092_31539661_31539784_31594769_31594906_31603767_31603908_31627109_31627195_31632216_31632406_31647740_31647850_31650114
transcript_23216.known	chr11	-	3182	12	FSM	ENSG00000007372.25	ENST00000379109.7	3182	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.62114131819336	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGTGTGGTGTTACAAATT	-31810641	False	NA	NA	False	NA	NA	NA	31810667	31788910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_31790020_31790709_31790861_31793437_31793554_31793651_31793803_31794031_31794115_31794629_31794789_31800690_31800857_31801560_31801777_31802703_31802835_31806401_31806463_31806848_31806926_31809905
transcript_23217.known	chr11	+	2369	6	FSM	ENSG00000049449.10	ENST00000054950.4	2369	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_5	127.426841756358	1354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTTTCTAGGTCATTT	32075687	True	NA	13	True	AATAAA	-18	NA	32091073	32105722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32091451_32097143_32097338_32098349_32098529_32100547_32100609_32103280_32103481_32104364
transcript_2322.known	chr1	-	2124	16	FSM	ENSG00000159423.17	ENST00000290597.9	2124	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	45.1750176781617	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18899442	True	NA	-5	True	AATAAA	-16	NA	18902553	18871429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_18871791_18872803_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_23244.known	chr11	+	5047	11	FSM	ENSG00000149100.13	ENST00000531120.6	5047	11	0	0	0	0	multi-exon	FALSE	canonical	3	2368	junction_3	231.308646617458	3797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTCATAAAATTCATTTA	32548735	True	NA	7	True	AATAAA	-20	NA	32583830	32606264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32583930_32587011_32587145_32588593_32588733_32589011_32589136_32589546_32589642_32593865_32593950_32594913_32595014_32595965_32596048_32600688_32600833_32601761_32601823_32602278
transcript_23245.known	chr11	+	2236	5	FSM	ENSG00000149100.13	ENST00000525782.5	2236	5	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	1083.22735379051	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32548736	True	NA	NA	False	NA	NA	NA	32583831	32601501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32583930_32589546_32589642_32593865_32595014_32595965_32596048_32600688
transcript_23248.known	chr11	+	5543	6	FSM	ENSG00000135378.4	ENST00000257836.4	5543	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.74355957741627	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATTTATTGCTTGTTTCAT	32829809	True	NA	5	True	AATAAA	-16	NA	32829926	32858120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_32830174_32830507_32830633_32836657_32836822_32838881_32838931_32840106_32840240_32853295
transcript_23249.known	chr11	+	1741	9	FSM	ENSG00000121690.11	ENST00000241051.8	1741	9	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_3	7.37288105152931	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGTGTGTCAGAAGCTAT	33015339	True	NA	14	True	AATAAA	-16	NA	33015877	33033582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33016029_33025658_33026050_33027685_33027814_33028602_33028793_33031377_33031590_33032335_33032479_33032667_33032794_33032888_33032968_33033261
transcript_2325.known	chr1	-	3139	15	FSM	ENSG00000159423.17	ENST00000375341.8	3139	15	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	21.6257593944757	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGTGGTGGATGGTCTT	-18899444	True	NA	-5	True	AATAAA	-16	NA	18902555	18871429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18876314_18876468_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_23253.known	chr11	-	2911	22	FSM	ENSG00000176102.13	ENST00000524827.6	2911	22	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_21	93.3739464601932	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAGAAACATCATGCTTC	-33151156	True	NA	-16	True	AATAAA	-4	NA	33161494	33084594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33156707_33156804_33161298
transcript_2326.known	chr1	-	2957	14	FSM	ENSG00000159423.17	ENST00000538839.5	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	46.5659804207361	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACAGTGGTGGATGGTC	-18899417	True	NA	-7	True	AATAAA	-14	NA	18902528	18871431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_18872958_18874462_18874582_18875381_18875504_18877207_18877256_18877415_18877613_18879299_18879374_18881699_18881888_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_23261.known	chr11	-	558	4	FSM	ENSG00000176102.13	ENST00000524556.1	558	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	254.088348589401	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAGTTAGGAACATAG	-33151157	True	NA	47	True	NA	NA	NA	33161495	33141607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33141763_33141884_33141987_33144869_33144974_33161298
transcript_23262.nic	chr11	-	726	4	ISM	ENSG00000176102.13	ENST00000524827.6	2911	22	0	56836	0	34	5prime_fragment	FALSE	canonical	3	24	junction_3	241.381210720489	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTGCTTTAGCCTTTT	-33151156	True	NA	-20	True	ATTAAA	-16	NA	33161494	33141430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_33141763_33141884_33141987_33156707_33156804_33161298
transcript_23269.known	chr11	+	739	2	FSM	ENSG00000176148.16	ENST00000532687.5	739	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTGCATGGGAAATTAAC	33039400	False	NA	NA	False	NA	NA	NA	33039416	33044112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_33039793_33043749
transcript_2327.nic	chr1	-	854	8	NIC	ENSG00000159423.17	novel	844	6	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	63.3400282891748	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTTGGATGTAGTCTCTC	-18899475	True	NA	-2	True	AATAAA	-16	NA	18902586	18882559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_18882673_18883123_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_23270.known	chr11	-	2812	21	FSM	ENSG00000176102.13	ENST00000323959.9	2812	21	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_15	100.97999801941	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGCTTCCTCTGCTTCTT	-33151142	True	NA	-5	True	AATAAA	-15	NA	33161480	33084583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33085290_33085712_33085774_33085894_33085990_33086987_33087142_33090531_33090728_33092270_33092341_33096305_33096409_33096834_33096979_33098689_33098765_33099033_33099151_33099607_33099718_33102176_33102340_33103106_33103185_33105566_33105694_33105882_33105918_33105997_33106065_33107902_33108001_33108385_33108419_33141666_33141763_33141884_33141987_33161298
transcript_23271.known	chr11	-	715	2	FSM	ENSG00000176102.13	ENST00000431742.2	715	2	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_1	0	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTGCAACAACATTAAAA	-33151153	True	NA	17	True	NA	NA	NA	33161491	33141464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33141987_33161298
transcript_23272.nnic	chr11	+	727	3	Fusion	ENSG00000247151.7_ENSG00000241255.1	novel	568	3	NA	NA	-14	80	multi-exon	FALSE	canonical	0	0	junction_1	0	211	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTATCTTATTTGTTTTA	33161347	True	NA	NA	False	AATAAA	-22	NA	33161642	33237489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_33161782_33178711_33178809_33236998
transcript_23273.nnic	chr11	+	708	2	Fusion	ENSG00000247151.7_ENSG00000241255.1	novel	568	3	NA	NA	-92	80	multi-exon	FALSE	canonical	2	11	junction_1	0	259	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTATCTTATTTGTTTTA	NA	False	NA	NA	False	AATAAA	-22	NA	33161564	33237489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_33161782_33236998
transcript_23276.known	chr11	-	584	6	FSM	ENSG00000085063.17	ENST00000528700.2	584	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	185.771472513947	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAGCCTGGAGCCTTCA	-33731390	True	NA	NA	False	AAAACA	-28	NA	33736422	33710152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33733494_33733615_33736381
transcript_23278.known	chr11	-	678	5	FSM	ENSG00000085063.17	ENST00000351554.8	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	175.074269954211	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCTAAGATAGAGGGGC	-33731447	True	NA	-26	True	AATAAA	-15	NA	33736479	33709995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33731423_33731469_33736381
transcript_2328.nic	chr1	-	1308	7	ISM	ENSG00000159423.17	ENST00000375341.8	3139	15	-31	11127	-31	3	5prime_fragment	FALSE	canonical	3	141	junction_4	21.1220001157298	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGTAGTCTCTCTCG	-18899475	True	NA	1	True	AATAAA	-19	NA	18902586	18882556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_18883199_18883278_18883429_18885472_18885629_18886463_18886512_18889361_18889455_18890011_18890106_18902461
transcript_23281.known	chr11	-	7563	4	FSM	ENSG00000085063.17	ENST00000642928.2	7563	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	58.0746645850552	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGCCTTTAATATGTAATAA	-33731391	True	NA	NA	False	AATATA	-25	NA	33736423	33703009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33736381
transcript_23285.known	chr11	-	686	5	FSM	ENSG00000085063.17	ENST00000527577.5	686	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	197.020303522251	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAGCAACCTGGCTAAGA	-33731393	True	NA	-35	True	AATAAA	-6	NA	33736425	33710004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33710344_33717369_33717472_33722378_33722464_33733494_33733611_33736381
transcript_23286.known	chr11	-	572	4	FSM	ENSG00000284969.1	ENST00000534312.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.762093968483	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCATGGTCTCTCTCCTCT	-33722425	True	NA	NA	False	NA	NA	NA	33722456	33698260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33698515_33710205_33710344_33717369_33717472_33722378
transcript_23289.known	chr11	-	2403	11	FSM	ENSG00000110429.14	ENST00000265651.8	2403	11	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_1	30.4197304393053	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTATTTTGTATAATTG	-33772570	True	NA	-6	True	TTTAAA	-19	NA	33774520	33740943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33742085_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_23291.nnic	chr11	-	1655	11	NNC	ENSG00000110429.14	novel	1672	10	NA	NA	-2	-1034	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	63.1819594504634	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTACTGATGGTTGAAT	-33772577	True	NA	1	True	AATAAA	-20	NA	33774527	33742772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_33743159_33747129_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_23294.known	chr11	-	1672	10	FSM	ENSG00000110429.14	ENST00000448981.6	1672	10	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_4	13.1749856513615	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGTGGATGTGTAC	NA	False	NA	NA	False	AATAAA	-33	NA	33774543	33746742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_33747321_33748776_33748893_33750538_33750662_33751522_33751608_33754454_33754501_33755770_33755976_33758486_33758602_33768850_33769015_33770740_33770831_33774393
transcript_23295.known	chr11	-	1167	2	FSM	ENSG00000286626.1	ENST00000664488.1	1167	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTTCCTCGGAATT	-34052105	False	73	NA	False	ATTAAA	-14	NA	34052132	34049966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34051034_34052032
transcript_23298.known	chr11	+	3973	29	FSM	ENSG00000135372.10	ENST00000257829.8	3973	29	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_13	28.0641348212502	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	34097866	True	NA	31	True	AATAAA	-17	NA	34105628	34146908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34105793_34108210_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34122458_34122593_34123761_34123856_34124301_34124401_34127462_34127600_34130812_34130938_34131380_34131532_34132124_34132222_34133025_34133143_34134318_34134421_34134511_34134587_34135174_34135292_34136641_34136776_34136977_34137027_34139190_34139288_34139384_34139496_34140399_34140573_34141088_34141209_34141718_34141818_34142274_34142349_34143444_34143529_34146083
transcript_2330.known	chr1	-	5408	23	FSM	ENSG00000127463.16	ENST00000375199.7	5408	23	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_14	65.8121544201486	294	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATAAAAAAAAATTAG	-19245632	True	NA	NA	False	NA	NA	NA	19251509	19216873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19219483_19219568_19219699_19220763_19220849_19222623_19222835_19223395_19223570_19227312_19227451_19230843_19230964_19231260_19231423_19232623_19232774_19232935_19233136_19235129_19235253_19237141_19237239_19238016_19238140_19238794_19238855_19239230_19239303_19239817_19239986_19240296_19240447_19241015_19241143_19242344_19242474_19243613_19243708_19243949_19244016_19244905_19245031_19251414
transcript_23306.known	chr11	+	1600	8	FSM	ENSG00000135372.10	ENST00000527971.5	1600	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	101.412473571639	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTGCCTGTGAGTGTTC	34100446	False	NA	31	True	AATAAA	-17	NA	34108208	34146908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34108334_34108741_34108834_34112051_34112224_34113715_34113839_34115822_34115885_34118179_34118295_34118395_34118504_34146105
transcript_23307.known	chr11	-	4905	17	FSM	ENSG00000166016.6	ENST00000435224.3	4905	17	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_16	5.10170008428563	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCCTCACTGCTCCTG	-34357484	True	NA	0	True	AATAAA	-17	NA	34358010	34150986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34152585_34154264_34154379_34154700_34154770_34159295_34159387_34159905_34160009_34160247_34160354_34160902_34161082_34162575_34162806_34164685_34164822_34165259_34165357_34167258_34167361_34167902_34167993_34170905_34171072_34173154_34173308_34197324_34197539_34204543_34204691_34356700
transcript_23310.known	chr11	+	2291	13	FSM	ENSG00000121691.7	ENST00000241052.5	2291	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	13.5820551545862	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTATTTTCTTTCTT	34437578	True	NA	9	True	AATAAA	-20	NA	34438933	34472060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34439080_34449191_34449364_34450987_34451099_34452076_34452208_34453089_34453195_34453800_34453927_34456010_34456203_34456664_34456818_34461250_34461390_34464104_34464236_34468287_34468396_34470957_34471042_34471367
transcript_23313.known	chr11	+	348	2	FSM	ENSG00000121691.7	ENST00000525707.2	348	2	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAATAAACTA	NA	False	NA	NA	False	AAAAAG	-39	NA	34464110	34468510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34464236_34468287
transcript_23319.known	chr11	+	2659	11	FSM	ENSG00000110435.13	ENST00000448838.8	2659	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.132604641256	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	NA	False	NA	23	True	AATAAA	-19	NA	34916129	34996128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34916487_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_23323.known	chr11	+	2500	11	FSM	ENSG00000110435.13	ENST00000227868.9	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	46.4207927549713	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTTCTAGAACACCTTTA	34910616	True	NA	23	True	AATAAA	-19	NA	34916617	34996128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34984569_34984729_34992314_34992380_34994913
transcript_23330.nnic	chr11	+	1402	9	NNC	ENSG00000110435.13	novel	2500	11	NA	NA	-188	-4356	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_8	133.588687769586	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCATTCATGAGGGT	34916419	False	NA	NA	False	ATTAAA	-14	NA	34916429	34980525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_34916816_34931403_34931485_34947505_34947607_34957383_34957584_34960419_34960519_34966639_34966815_34970138_34970287_34978123_34978183_34980372
transcript_23334.known	chr11	+	952	6	FSM	ENSG00000110435.13	ENST00000430469.6	952	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	182.999453551097	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAATGTTTATTTATTTAA	34910630	True	NA	NA	False	AAGAAA	-45	NA	34916631	34995275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_34916816_34931403_34931485_34947505_34947607_34984569_34984729_34992314_34992380_34994913
transcript_23348.known	chr11	-	1246	7	FSM	ENSG00000149089.13	ENST00000395787.4	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_5	13.6381816969859	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCCCTCAATGTTAATG	-34911686	True	NA	-4	True	AATAAA	-21	NA	34916379	34882294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34895009_34895111_34916227
transcript_23349.known	chr11	-	1042	6	FSM	ENSG00000149089.13	ENST00000527830.1	1042	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	118.835348276512	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTCATTGTGGAATGAGC	-34911658	True	NA	-13	True	AATAAA	-15	NA	34916351	34882369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_34882817_34883336_34883505_34888292_34888429_34888751_34888870_34890503_34890553_34916227
transcript_23352.known	chr11	+	2292	12	FSM	ENSG00000026508.21	ENST00000433892.6	2292	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	7.47558007920865	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTGTGCTGTGATTCTT	35138650	True	NA	9	True	AATAAA	-24	NA	35139187	35230027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35208104_35208207_35209964_35210055_35211245_35211450_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_23357.known	chr11	+	4288	9	FSM	ENSG00000026508.21	ENST00000263398.11	4288	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.28490254498827	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGAAGTCTCTAATTTAA	35138633	True	NA	14	True	ATTAAA	-32	NA	35139170	35232402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35139371_35176574_35176741_35180273_35180408_35186831_35186901_35189834_35190066_35214851_35214915_35219315_35219388_35221653_35221733_35229128
transcript_23359.known	chr11	+	518	2	FSM	ENSG00000255542.1	ENST00000534165.1	518	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTTACCTCCTTCC	NA	False	NA	NA	False	AATAAA	-14	NA	35419056	35421002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35419108_35420535
transcript_23360.known	chr11	-	2723	11	FSM	ENSG00000149090.13	ENST00000619888.5	2723	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	2.76405499221705	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTGCTATGCTCTTAT	-35525492	True	NA	NA	False	AATAAA	-28	NA	35525616	35431826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_35432893_35434511_35434805_35435902_35436136_35439626_35439694_35441480_35441694_35468000_35468109_35470600_35470819_35474629_35474745_35492044_35492174_35494095_35494273_35525512
transcript_23361.known	chr11	+	12994	5	FSM	ENSG00000166326.7	ENST00000299413.7	12994	5	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	25.7342184649155	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTCTCAGGTGTTTCTT	35660488	True	NA	3	True	ATTAAA	-16	NA	35662774	35818007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35663781_35685258_35685337_35725923_35726164_35735425_35735446_35806357
transcript_23366.known	chr11	+	3814	6	FSM	ENSG00000179241.13	ENST00000315571.6	3814	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	10.8369737473153	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTGTGCAAATGGTCC	35941474	True	NA	8	True	AATAAA	-18	NA	35944061	36232136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_23369.nnic	chr11	+	774	5	NNC	ENSG00000179241.13	novel	3814	6	NA	NA	-7	42150	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	49.9368351019566	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATGATTTGGGCCTGAAT	35941467	True	NA	NA	False	AATAAA	-19	NA	35944054	36274286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_35944145_36036102_36036250_36081652_36081779_36098326_36098462_36274010
transcript_2337.known	chr1	+	507	2	FSM	ENSG00000230424.2	ENST00000437898.2	653	2	146	0	140	0	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAATCAGCACTTCTT	19209836	True	NA	NA	False	AATATA	-25	NA	19210500	19240704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19210560_19240256
transcript_23370.known	chr11	+	1879	5	FSM	ENSG00000179241.13	ENST00000528989.5	1879	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	43.5229824345713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTAACTTGAGTTGGCCCA	NA	False	NA	NA	False	NA	NA	NA	35943980	36230267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_35944145_36081652_36081779_36098326_36098462_36227084_36227431_36229159
transcript_23373.nnic	chr11	-	1371	6	NNC	ENSG00000110442.12	novel	2949	6	NA	NA	74	0	intron_retention	FALSE	canonical	0	0	junction_5	115.149641771045	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGATTTTTGTAGCTTCTT	-36286404	True	NA	-4	True	ACTAAA	-19	NA	36289350	36273959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36280711_36280838_36289197
transcript_23374.known	chr11	-	917	5	FSM	ENSG00000110442.12	ENST00000452374.6	917	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	124.407345040395	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACATGGAGGGAATCGGACA	-36286503	True	NA	NA	False	NA	NA	NA	36289449	36274222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_36274773_36276136_36276241_36277088_36277124_36278476_36278617_36289361
transcript_23378.known	chr11	-	7885	7	FSM	ENSG00000175104.15	ENST00000526995.6	7885	7	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	14.1037819986934	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATAGTCCAAGTGGTTT	-36509301	True	NA	-14	True	ATTAAA	-21	NA	36510272	36483768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_36490651_36492550_36492629_36494975_36495048_36497107_36497267_36498489_36498641_36501219_36501538_36510047
transcript_2338.nnic	chr1	+	299	2	FSM	ENSG00000230424.2	ENST00000690421.1	296	2	-3	0	-3	0	multi-exon	FALSE	canonical	3	39	junction_1	0	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTCTAGTTCTTATTTT	19209693	True	NA	14	True	AATAAA	-20	NA	19210357	19213718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19210560_19213621
transcript_23381.known	chr11	+	930	6	FSM	ENSG00000166352.18	ENST00000531554.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	8.49941174435031	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	36593869	True	NA	26	True	AATAAA	-33	NA	36594501	36659287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_23383.known	chr11	+	1062	6	FSM	ENSG00000166352.18	ENST00000446510.6	1062	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	16.4608626748418	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTGTGCACTCATTTAT	NA	False	NA	29	True	AATAAA	-36	NA	36594492	36659290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594762_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_23384.known	chr11	+	866	6	FSM	ENSG00000166352.18	ENST00000334307.10	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	9.81019877474458	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593869	True	NA	11	True	AATAAA	-18	NA	36594501	36659272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_23385.known	chr11	+	1207	6	FSM	ENSG00000166352.18	ENST00000617650.5	1207	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.895250766614	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTGCACTCATTTA	36593868	True	NA	28	True	AATAAA	-35	NA	36594500	36659289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594916_36610080_36610240_36633283_36633439_36636050_36636118_36648015_36648156_36659018
transcript_23387.known	chr11	+	3485	5	FSM	ENSG00000166352.18	ENST00000677116.1	3485	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.6942020865749	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAATCCACCAATTTCT	36593869	True	NA	NA	False	ATTAAA	-16	NA	36594501	36661909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_2339.nnic	chr1	+	571	2	NNC	ENSG00000230424.2	novel	296	2	NA	NA	9	-9	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTGATCTAGTCTAGT	19209705	True	NA	5	True	AATAAA	-11	NA	19210369	19213709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_19210560_19213328
transcript_23390.known	chr11	+	3438	5	FSM	ENSG00000166352.18	ENST00000679072.1	3438	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.820662813657	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAATATATTATTAAAA	NA	False	NA	NA	False	ATTAAA	-3	NA	36594486	36661896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36610080_36610240_36633283_36633439_36648015_36648156_36659018
transcript_23392.known	chr11	+	646	4	FSM	ENSG00000166352.18	ENST00000527108.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.062378404209	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTCCCTTTGTGGAAATT	36593913	True	NA	8	True	AATAAA	-15	NA	36594545	36659269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594642_36610080_36610240_36648015_36648156_36659018
transcript_23393.known	chr11	+	801	4	FSM	ENSG00000166352.18	ENST00000534635.5	801	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	21.7715410570772	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTGTGGAAATTTACAT	36593883	True	NA	13	True	AATAAA	-20	NA	36594515	36659274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594762_36610080_36610240_36648015_36648156_36659018
transcript_23394.known	chr11	+	633	4	FSM	ENSG00000166352.18	ENST00000347206.8	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	16.6733320005331	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593880	True	NA	11	True	AATAAA	-18	NA	36594512	36659272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36610080_36610240_36648015_36648156_36659018
transcript_23398.known	chr11	+	488	3	FSM	ENSG00000166352.18	ENST00000677808.1	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCCTTTGTGGAAATTTAC	36593866	True	NA	11	True	AATAAA	-18	NA	36594498	36659272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36594593_36648015_36648156_36659018
transcript_23401.known	chr11	+	612	4	FSM	ENSG00000166352.18	ENST00000677156.1	612	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.6126143312331	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATGTGTGCACTCATT	NA	False	NA	26	True	AATAAA	-33	NA	36610103	36659287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_36610240_36636050_36636118_36648015_36648156_36659018
transcript_23404.known	chr11	+	3648	20	FSM	ENSG00000052841.15	ENST00000299240.10	3648	20	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_19	151.783524228247	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAAGTTCTCCTTCCTGCC	43352613	True	NA	NA	False	TATAAA	-16	NA	43358931	43446719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445_43401559_43403997_43404145_43405513_43405630_43405785_43405952_43407137_43407216_43407352_43407578_43414589_43414777_43436163_43436335_43443324_43443585_43444055_43444210_43445930
transcript_23407.nic	chr11	+	1426	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-7	45097	5	0	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTTCCTCTTGATTCTT	43352606	True	NA	20	True	TATAAA	-32	NA	43358924	43401622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_23408.nic	chr11	+	1835	10	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-7	44688	5	409	5prime_fragment	FALSE	canonical	3	742	junction_5	51.9360955857423	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCGAGAGAGAGATTTTGA	43352606	True	NA	NA	False	AATAAA	-45	NA	43358924	43402031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708_43396819_43397346_43397492_43397973_43398114_43399887_43400049_43401445
transcript_23413.nic	chr11	+	958	6	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-7	49746	5	-1085	5prime_fragment	FALSE	canonical	3	742	junction_5	63.2379632815605	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAGATCTCAAAAAGTTC	43352606	True	NA	NA	False	AAGAAA	-30	NA	43358924	43396973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651_43389822_43391464_43391577_43391820_43391953_43396708
transcript_23417.nic	chr11	+	1303	3	ISM	ENSG00000052841.15	ENST00000299240.10	3648	20	-7	56044	5	-1113	5prime_fragment	FALSE	canonical	3	790	junction_2	34.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAGAAAAAAATAAAATTGAA	43352606	True	NA	NA	False	AATAAA	-42	NA	43358924	43390675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43379232_43379323_43389651
transcript_23418.nic	chr11	+	663	2	ISM	ENSG00000052841.15	ENST00000534347.5	889	6	-19	21308	3	-21226	5prime_fragment	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAAAACATGTTACGTAGT	43352616	True	NA	NA	False	NA	NA	NA	43358934	43370562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_43359114_43370078
transcript_23421.known	chr11	+	3726	14	FSM	ENSG00000166181.13	ENST00000531273.6	3726	14	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_13	239.973445276493	385	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293774	True	NA	23	True	AATAAA	-18	NA	43311995	43344529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_23422.known	chr11	+	3714	14	FSM	ENSG00000166181.13	ENST00000378852.7	3714	14	0	0	0	0	multi-exon	FALSE	canonical	3	661	junction_13	237.266758718746	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293781	True	NA	23	True	AATAAA	-18	NA	43312002	43344529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342432
transcript_23423.known	chr11	+	2257	15	FSM	ENSG00000166181.13	ENST00000455725.6	2257	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	464.027428156604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGCAGCATTCCTACCTAG	43293756	True	NA	NA	False	AATAAA	-14	NA	43311977	43342980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318420_43318483_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857_43335995_43342427
transcript_23424.known	chr11	+	1760	13	FSM	ENSG00000166181.13	ENST00000534600.5	1760	13	0	0	0	0	multi-exon	FALSE	canonical	3	1219	junction_9	132.236530505001	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTCTTGTATTCAGAGGA	43293874	True	NA	NA	False	ATTAAA	-24	NA	43312095	43336230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43326506_43326612_43327788_43327879_43328711_43328894_43329964_43330059_43330507_43330565_43335277_43335355_43335857
transcript_2343.nnic	chr1	+	1253	9	NNC	ENSG00000053372.5	novel	2049	8	NA	NA	-270	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	170.393478455016	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTGGCCCTCTTTTTTC	NA	False	NA	21	True	AGTAAA	-15	NA	19251534	19260126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680_19258978_19260041
transcript_23434.nnic	chr11	+	3025	7	NIC	ENSG00000166181.13	novel	3726	14	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_6	557.337544840547	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTCTTGATGTGTT	43293733	True	NA	23	True	AATAAA	-18	NA	43311954	43344529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43312197_43318639_43318802_43320820_43320915_43321410_43321477_43321984_43322137_43323429_43323637_43342427
transcript_23438.nnic	chr11	+	563	2	FSM	ENSG00000283341.3	ENST00000693635.1	565	2	0	2	0	-2	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAAGGTTGTGGGTGGTTT	43644140	True	NA	7	True	AATAAA	-18	NA	43644235	43650107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43644379_43649687
transcript_23445.known	chr11	+	2396	11	FSM	ENSG00000149084.13	ENST00000278353.10	2396	11	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_3	39.7830365859621	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACATTGTTTGCCCTTTTTT	43668794	True	NA	27	True	AATAAA	-43	NA	43680737	43856615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43798319_43798428_43815436_43815502_43816346_43816392_43830975_43831011_43838316_43838399_43839998_43840065_43854714_43854865_43855143
transcript_23453.known	chr11	+	994	4	FSM	ENSG00000149084.13	ENST00000395700.4	994	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	489.795422146385	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTATGAGTCCTTGTTTT	43668837	True	NA	NA	False	AATAAA	-21	NA	43680780	43755536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43680988_43750910_43750958_43754045_43754122_43754872
transcript_23458.known	chr11	+	1544	10	FSM	ENSG00000166199.13	ENST00000302708.9	1544	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	12.3867711194416	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTGTTCTAAGCAGTT	43880001	True	NA	11	True	ATTAAA	-24	NA	43880830	43920274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_23460.nic	chr11	+	1803	10	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	17.9009621094634	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880001	True	NA	3	True	ATTAAA	-16	NA	43880830	43920266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881447_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43901515_43901726_43919037_43919137_43919917
transcript_23461.nnic	chr11	+	1327	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_7	19.4096464419113	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880000	True	NA	3	True	ATTAAA	-16	NA	43880829	43920266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43892040_43892130_43919037_43919137_43919917
transcript_23462.nic	chr11	+	1520	9	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_6	18.3809514171601	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	NA	False	NA	3	True	ATTAAA	-16	NA	43880757	43920266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43901515_43901726_43919037_43919137_43919917
transcript_23467.nic	chr11	+	1238	8	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	20.1919361556609	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880000	True	NA	3	True	ATTAAA	-16	NA	43880829	43920266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881180_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
transcript_23469.nic	chr11	+	1504	8	NIC	ENSG00000166199.13	novel	1544	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_6	24.1770679000763	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGATGATTTTGTTCT	43880001	True	NA	3	True	ATTAAA	-16	NA	43880830	43920266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_43881447_43882582_43882732_43883084_43883189_43883982_43884018_43886605_43886654_43889724_43889829_43919037_43919137_43919917
transcript_23473.known	chr11	+	2383	15	FSM	ENSG00000110455.14	ENST00000263776.9	2383	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	5.57005477568054	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCGAGGAGAATGGAATGA	44066246	True	NA	4	True	AATAAA	-21	NA	44066269	44084237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44066702_44067627_44067916_44071255_44071316_44073446_44073518_44074611_44074682_44075525_44075593_44077278_44077377_44077844_44077923_44078683_44078785_44079530_44079621_44081019_44081066_44081178_44081321_44083168_44083312_44083423_44083578_44083694
transcript_23479.known	chr11	+	2997	15	FSM	ENSG00000151348.16	ENST00000358681.8	2997	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.4775059290326	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	44090598	True	NA	16	True	ATTAAA	-20	NA	44095716	44244931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44144246_44144340_44171673_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_23481.known	chr11	+	10037	14	FSM	ENSG00000151348.16	ENST00000533608.7	10037	14	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	27.9136453662566	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTATTATATGTGGAT	44090559	True	NA	NA	False	AATAAA	-19	NA	44095677	44251962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44124788_44124985_44126815_44126956_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_23483.known	chr11	+	4928	12	FSM	ENSG00000151348.16	ENST00000684533.1	4928	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	60.7827726789874	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAGAAAAACAGCAACTTTA	44090544	True	NA	NA	False	TATAAA	-23	NA	44095662	44247174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44095853_44107682_44108249_44109193_44109284_44114184_44114302_44130044_44130139_44171610_44171743_44197828_44198019_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_23484.nnic	chr11	+	1475	6	NNC	ENSG00000151348.16	novel	3631	4	NA	NA	-5498	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	89.749874651723	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTGTGTCTTAAACACC	44199388	True	NA	16	True	ATTAAA	-20	NA	44199484	44244931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_44199654_44206792_44206960_44232352_44232497_44234114_44234244_44236292_44236376_44244148
transcript_23486.nnic	chr11	+	1837	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-25	72	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.8392398878334	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAATTGGGGAGGGAA	44564577	True	NA	NA	False	NA	NA	NA	44565575	44619781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615171_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_23487.nnic	chr11	+	2414	11	NNC	ENSG00000085117.12	novel	2212	10	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	16.8392398878334	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	44564577	True	NA	5	True	ATTAAA	-15	NA	44565575	44620358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615055_44615171_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_23489.known	chr11	+	2212	10	FSM	ENSG00000085117.12	ENST00000227155.9	2212	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	9.7080849594679	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAGTCTGGAATGGTAGG	44564664	True	NA	5	True	ATTAAA	-15	NA	44565662	44620358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_44565737_44587474_44587557_44594642_44594726_44600157_44600231_44605057_44605183_44605354_44605430_44615271_44615374_44618161_44618366_44618639_44618724_44619048
transcript_23496.nnic	chr11	-	616	2	NNC	ENSG00000255079.1	novel	789	2	NA	NA	1029	5560	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTTTCATTGGTCTTTC	NA	False	NA	NA	False	AATAAA	-16	NA	44695272	44689302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_44689501_44694854
transcript_23500.known	chr11	-	3683	8	FSM	ENSG00000175274.19	ENST00000308212.9	3683	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	75.0406692455253	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-1	True	AAGAAA	-30	NA	44951306	44932347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44939165_44939282_44950876
transcript_23502.known	chr11	-	3567	7	FSM	ENSG00000175274.19	ENST00000616990.4	3567	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	56.7707377675037	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGCGTCCTGTTTTAT	NA	False	NA	-1	True	AAGAAA	-30	NA	44951306	44932347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_44935018_44935560_44935663_44936802_44936900_44937303_44937353_44937554_44937614_44938206_44938367_44950876
transcript_2351.known	chr1	+	2049	8	FSM	ENSG00000053372.5	ENST00000330263.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	30.9825494003792	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGGCCCTCTTTTTTCTG	19246091	True	NA	23	True	AGTAAA	-17	NA	19251804	19260128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19251864_19254781_19254841_19255947_19256052_19257063_19257146_19257453_19257522_19257832_19257985_19258476_19258554_19258680
transcript_23516.known	chr11	+	993	3	FSM	ENSG00000254427.3	ENST00000669834.2	1006	3	13	0	3	0	multi-exon	FALSE	canonical	2	15	junction_2	1.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCAAAGCAAAAACCTGGG	45355383	True	NA	NA	False	NA	NA	NA	45355472	45357211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45355603_45355878_45355926_45356395
transcript_23517.known	chr11	+	872	2	FSM	ENSG00000254427.3	ENST00000524565.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAATTAGTGTGTGGTCT	45355411	True	NA	-1	True	AATAAA	-7	NA	45355500	45356648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45355603_45355878
transcript_23518.known	chr11	+	361	2	FSM	ENSG00000254427.3	ENST00000524488.1	361	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTAGTGTGTGGTCTTTAGT	45355410	True	NA	4	True	AATAAA	-12	NA	45355499	45356653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45355603_45356395
transcript_23519.known	chr11	+	3429	2	FSM	ENSG00000181830.9	ENST00000314134.4	3429	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGTGTGGCCTGAG	45804541	True	NA	13	True	AATAAA	-13	NA	45805148	45813016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45806337_45810775
transcript_23527.known	chr11	-	1639	11	FSM	ENSG00000121680.16	ENST00000532681.5	1639	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	57.6919405116521	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCCCTAATAAAACTGACT	-45918342	True	NA	-35	True	NA	NA	NA	45918812	45910204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45918121
transcript_23538.known	chr11	-	1668	11	FSM	ENSG00000121680.16	ENST00000378750.10	1668	11	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	14.7	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATCGGGCACTGGCCAG	-45916546	True	NA	-2	True	AGTAAA	-23	NA	45917877	45909662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_45910313_45910897_45910963_45913818_45913939_45914130_45914204_45914315_45914469_45914603_45914685_45915467_45915569_45915702_45915837_45916226_45916304_45917457_45917494_45917699
transcript_23539.known	chr11	+	2294	10	FSM	ENSG00000165905.18	ENST00000528236.5	2294	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	283.80000783024	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTGTTCCTGGTTTG	45924130	False	NA	36	True	ATTAAA	-14	NA	45924149	45929096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_45924278_45924505_45924678_45924784_45924890_45926038_45926348_45926441_45926598_45926710_45926872_45927314_45927594_45927748_45928070_45928176_45928373_45928629
transcript_23541.known	chr11	+	941	3	FSM	ENSG00000255314.4	ENST00000533793.1	941	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGCTTCTGAGTCTGT	NA	False	NA	NA	False	AGTAAA	-15	NA	46171946	46177105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46172025_46174584_46174691_46176348
transcript_23542.nnic	chr11	+	2204	12	NNC	ENSG00000157613.11	novel	1817	4	NA	NA	-396	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	30.9897343706531	55	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCAGCATCAACTCCTGA	46294539	True	NA	NA	False	AAGAAA	-26	NA	46294729	46321409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46294813_46299934_46300164_46307815_46308001_46309988_46310068_46311031_46311190_46312324_46312475_46312611_46312671_46312850_46312920_46316285_46316386_46317360_46317488_46320263_46320529_46320709
transcript_23548.nnic	chr11	+	550	2	NNC	ENSG00000157613.11	novel	2673	12	NA	NA	335	-14800	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTTATTCTCCAGAGGC	46277912	True	NA	NA	False	AATAAA	-15	NA	46277996	46293139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46278214_46292806
transcript_23550.known	chr11	+	1785	3	FSM	ENSG00000149091.15	ENST00000527674.5	1785	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	269	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAACAAAAACAAAAAAA	46344488	True	NA	NA	False	NA	NA	NA	46345433	46369175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46345586_46367290_46367400_46367651
transcript_23551.known	chr11	+	1166	5	FSM	ENSG00000110492.17	ENST00000405308.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	3740.20871743811	1729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAAGCTCTTCTTTTTT	46380743	False	NA	-12	True	AATAAA	-17	NA	46380755	46383799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_23555.known	chr11	+	985	5	FSM	ENSG00000110492.17	ENST00000359803.7	985	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3839.67088433371	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	46380310	True	NA	14	True	AATAAA	-43	NA	46381067	46383825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381289_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_23559.known	chr11	+	951	5	FSM	ENSG00000110492.17	ENST00000395565.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	3745.83030682117	2583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	46297220	True	NA	26	True	AATAAA	-33	NA	46381710	46383837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_23561.known	chr11	+	1339	5	FSM	ENSG00000110492.17	ENST00000489525.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	4250.12932156187	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTTCTTTTTTAATATAT	46297246	True	NA	-5	True	AATAAA	-24	NA	46381736	46383806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381886_46382056_46382134_46382293_46382462_46382586_46383194_46383468
transcript_23563.known	chr11	+	603	4	FSM	ENSG00000110492.17	ENST00000490240.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	3992.71856703619	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAAGTTAAACCTTAAGT	46380303	True	NA	NA	False	GGGGCT	-33	NA	46381060	46382821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381184_46382056_46382134_46382293_46382462_46382586
transcript_23566.known	chr11	+	498	4	FSM	ENSG00000110492.17	ENST00000533283.5	498	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4224.06639257587	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTGACCCACCAGTGCCTT	46297202	True	NA	NA	False	NA	NA	NA	46381692	46383570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381759_46382293_46382462_46382586_46382749_46383468
transcript_23573.known	chr11	+	830	5	FSM	ENSG00000110492.17	ENST00000395566.9	830	5	0	0	0	0	multi-exon	FALSE	canonical	3	5885	junction_1	1301.04465238515	19673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGCTCTTCTTTTTTAA	46297178	True	NA	-10	True	AATAAA	-19	NA	46381668	46383801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381759_46382056_46382134_46382293_46382462_46382586_46382749_46383468
transcript_23574.known	chr11	+	1026	4	FSM	ENSG00000110492.17	ENST00000407067.1	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	8656	junction_1	224.156195542305	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACTTTTTCCCCCCAATA	46297262	True	NA	-28	True	AATAAA	-1	NA	46381752	46383783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46382134_46382293_46382462_46382586_46382749_46383468
transcript_23575.known	chr11	+	635	4	NNC	ENSG00000110492.17	novel	686	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	3793.09961201478	516	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGAGTTTGCTGTGGA	46297164	True	NA	26	True	AATAAA	-33	NA	46381654	46383837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46381759_46382056_46382134_46382663_46382749_46383468
transcript_23576.known	chr11	+	686	4	FSM	ENSG00000110492.17	ENST00000395569.8	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	3770.17880507307	829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGCCCCTTCCCAAGGA	46297178	True	NA	14	True	AATAAA	-43	NA	46381668	46383825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46381759_46382056_46382134_46382586_46382749_46383468
transcript_23577.known	chr11	-	498	1	FSM	ENSG00000244313.3	ENST00000467930.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9936	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGGAGAGGATTCTTTTG	-46429127	True	NA	-60	True	NA	NA	NA	46429150	46428652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46428700_46429200
transcript_23581.nic	chr11	+	2720	18	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	70	junction_2	102.186612656592	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617492	False	NA	18	True	AATAAA	-20	NA	46617507	46673041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46617891_46618259_46618376_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_23587.known	chr11	+	4014	17	FSM	ENSG00000175224.17	ENST00000524625.5	4014	17	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	63.7075532707857	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTGTCCTGTAGGTTG	46613995	True	NA	14	True	AATAAA	-20	NA	46617576	46674520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46630044_46630101_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_23590.nic	chr11	+	2664	17	NIC	ENSG00000175224.17	novel	4199	18	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_2	109.179593302732	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46617492	False	NA	18	True	AATAAA	-20	NA	46617507	46673041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46617891_46618259_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_23591.known	chr11	+	4348	17	FSM	ENSG00000175224.17	ENST00000359513.8	4348	17	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	144.071976369452	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCACCGTTATCAGCTCTT	46614014	False	NA	NA	False	AGTAAA	-17	NA	46617595	46674818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46664848_46664960_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_23592.known	chr11	+	2566	17	FSM	ENSG00000175224.17	ENST00000529655.5	2566	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	123.895857855499	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46613959	True	NA	18	True	AATAAA	-20	NA	46617540	46673041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46617891_46618324_46618376_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_23595.nic	chr11	+	2510	16	NIC	ENSG00000175224.17	novel	2566	17	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_1	82.1141211296138	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATTTTGTCACTTGGAGT	46613964	True	NA	18	True	AATAAA	-20	NA	46617545	46673041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_46617891_46644278_46644361_46645338_46645420_46645869_46645990_46649136_46649184_46650176_46650318_46656232_46656274_46657094_46657192_46657523_46657623_46659391_46659486_46665382_46665520_46667772_46667888_46668498_46668577_46668793_46668911_46669403_46669533_46672254
transcript_23604.known	chr11	-	1967	3	FSM	ENSG00000180423.4	ENST00000326737.3	1967	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	14	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-46616812	True	NA	NA	False	NA	NA	NA	46617227	46602860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46603910_46615567_46616382_46617123
transcript_23608.known	chr11	-	3395	13	FSM	ENSG00000175220.12	ENST00000311956.9	3395	13	0	0	0	0	multi-exon	TRUE	canonical	3	315	junction_6	20.1225412576709	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCATCTGGATGTTGGG	-46693144	True	NA	-12	True	AATAAA	-16	NA	46700619	46677079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46679226_46679364_46679469_46679647_46679777_46680204_46680283_46680486_46680564_46680639_46680748_46681010_46681110_46681292_46681380_46682050_46682183_46688172_46688261_46695659_46695756_46695974_46696157_46700550
transcript_23611.known	chr11	+	2229	5	FSM	ENSG00000175213.3	ENST00000311764.3	2229	5	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_2	3.64005494464026	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCGTGTCTGCATCTT	46699788	True	NA	13	True	CATAAA	-17	NA	46701030	46705912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46701100_46701398_46701677_46702703_46702766_46702983_46703244_46704352
transcript_23621.known	chr11	-	6532	43	FSM	ENSG00000175216.15	ENST00000312055.9	6532	43	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_8	167.848012247448	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCCAAGATGCTCCATAT	-46836485	True	NA	-9	True	AATAAA	-21	NA	46846308	46743535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_46744266_46744425_46744578_46750273_46750434_46750527_46750612_46751117_46751256_46751345_46751535_46752634_46752711_46753309_46753498_46758922_46759044_46759268_46759443_46760611_46760785_46761999_46762194_46762626_46762763_46762975_46763180_46763480_46763631_46765130_46765257_46767574_46767664_46769962_46770099_46770787_46770983_46776254_46776384_46777438_46777553_46778138_46778314_46778459_46778600_46780193_46780320_46780427_46780486_46783273_46783369_46784487_46784674_46788680_46788774_46790075_46790187_46790469_46790584_46795593_46795777_46796811_46796941_46797804_46797970_46798082_46798173_46801199_46801305_46808030_46808145_46809399_46809501_46809741_46809875_46811006_46811179_46816197_46816405_46818309_46818504_46821174_46821269_46846219
transcript_23634.nnic	chr11	+	715	4	NNC	ENSG00000247675.8	novel	731	4	NA	NA	-48	9009	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.54247233265651	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTCATTTTTTGTCT	NA	False	NA	NA	False	AATACA	-17	NA	46846361	46855920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46846500_46846609_46846718_46852851_46852947_46855546
transcript_23635.known	chr11	+	1540	3	FSM	ENSG00000247675.8	ENST00000502049.3	1540	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGGCATTTGATTGGGG	46846353	True	NA	8	True	AATAAA	-44	NA	46846415	46874421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46846500_46846609_46846718_46873073
transcript_23637.nic	chr11	+	268	2	FSM	ENSG00000247675.8	ENST00000685514.1	392	2	-48	172	-48	0	multi-exon	FALSE	canonical	3	16	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTGGAGTTGTTTCCTT	NA	False	NA	NA	False	AGTAAA	-18	NA	46846361	46846739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46846500_46846609
transcript_23641.known	chr11	+	1651	9	FSM	ENSG00000149179.14	ENST00000378615.7	1651	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	77.1050419881865	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933786	True	NA	24	True	AATAAA	-21	NA	46936777	47162247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161445
transcript_23642.nnic	chr11	+	1168	9	NNC	ENSG00000149179.14	novel	1650	9	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_8	83.6671231727254	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933717	True	NA	24	True	AATAAA	-21	NA	46936708	47162247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161997
transcript_23643.known	chr11	+	1166	9	FSM	ENSG00000149179.14	ENST00000378618.6	1166	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	86.9511357027612	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAAGTCCCTCTGGGGGAG	46933762	True	NA	NA	False	AATACA	-18	NA	46936753	47164385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47164092
transcript_23652.known	chr11	+	1916	8	FSM	ENSG00000149179.14	ENST00000395460.6	1916	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_7	10.7760126660835	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTGAGTCTAAAGCTCCT	46933776	True	NA	24	True	AATAAA	-21	NA	46936767	47162247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126
transcript_23653.known	chr11	+	1069	8	FSM	ENSG00000149179.14	ENST00000527784.5	1069	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	91.5991711931135	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGAATGGCCTGCTCTCC	46933788	True	NA	NA	False	GGGGCT	-31	NA	46936779	47161816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_23654.known	chr11	+	1527	8	FSM	ENSG00000149179.14	ENST00000525895.5	1527	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	77.6722575430683	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTGGTGAGTCTAAAGCTC	46933787	True	NA	22	True	AATAAA	-19	NA	46936778	47162245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_47052387_47052519_47137644_47137730_47155175_47155262_47157022_47157219_47157812_47157923_47161126_47161191_47161463
transcript_23661.known	chr11	+	719	4	FSM	ENSG00000149179.14	ENST00000532840.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	4.89897948556636	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGAAAAGAGGGGCTG	46933768	True	NA	NA	False	NA	NA	NA	46936759	47138037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387_47052519_47137644
transcript_23664.known	chr11	+	825	3	FSM	ENSG00000149179.14	ENST00000522712.6	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	6	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGTGAATATGAAGAAAGAAA	46933753	True	NA	NA	False	ATTAAA	-28	NA	46936744	47053002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207_46987311_47052387
transcript_23667.known	chr11	+	770	2	FSM	ENSG00000149179.14	ENST00000531648.5	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAATCCCATCAAAAAAT	46933756	True	NA	NA	False	AATATA	-34	NA	46936747	46987873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_46936852_46987207
transcript_23669.known	chr11	-	2773	16	FSM	ENSG00000149182.15	ENST00000524782.6	2773	16	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_10	38.8286263241725	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGTCCTCTGGATCCTG	-47169047	True	NA	-4	True	AATAAA	-39	NA	47176879	47164300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47165503_47166267_47166387_47166505_47166600_47166759_47166887_47167908_47168044_47168122_47168252_47171425_47171558_47171663_47171801_47172280_47172334_47173425_47173483_47173758_47173841_47175014_47175099_47175181_47175314_47175850_47175924_47176515_47176635_47176781
transcript_23672.known	chr11	-	1845	11	FSM	ENSG00000165912.16	ENST00000532457.5	1845	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.022606843951	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGACACACACCCACACACA	-47182310	True	NA	-45	True	ATTAAA	-3	NA	47186440	47177556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179028_47179154_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_23681.nic	chr11	-	577	4	ISM	ENSG00000165912.16	ENST00000532457.5	1845	11	2	4673	-2	176	5prime_fragment	FALSE	canonical	3	397	junction_3	24.7521042876493	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATGAGTTACTTTGATA	-47182308	True	NA	NA	False	ATTAAA	-14	NA	47186438	47182229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_47182560_47182673_47182765_47183003_47183070_47186348
transcript_23682.known	chr11	-	1873	11	FSM	ENSG00000165912.16	ENST00000298838.11	1873	11	0	0	0	0	multi-exon	FALSE	canonical	2	299	junction_3	56.5707521604583	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCGGGCTCATGTGCATT	-47182304	True	NA	-10	True	ATTAAA	-38	NA	47186434	47177521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47178047_47178365_47178488_47178893_47179031_47179158_47179280_47179410_47179587_47180185_47180342_47180454_47180691_47182402_47182560_47182673_47182765_47183003_47183070_47186348
transcript_23683.known	chr11	-	362	1	FSM	ENSG00000243802.2	ENST00000473109.2	362	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	46	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAACAATTTTAATAAATTG	NA	False	NA	NA	False	NA	NA	NA	47191542	47191180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47191200_47191500
transcript_23691.known	chr11	+	1815	10	FSM	ENSG00000134574.12	ENST00000256996.9	1815	10	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_6	83.0686165873033	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	47210429	True	NA	25	True	AATAAA	-15	NA	47214973	47239217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47234935_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23692.known	chr11	+	1591	9	FSM	ENSG00000134574.12	ENST00000378601.7	1591	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	145.439796393559	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGGCCAATAAAACCATA	47210447	True	NA	-3	True	NA	NA	NA	47214991	47239189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47235269_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23693.known	chr11	+	3101	8	FSM	ENSG00000134574.12	ENST00000612309.4	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_4	78.4541982591741	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	47210550	True	NA	25	True	AATAAA	-15	NA	47215094	47239217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47216473_47216857_47217050_47232813_47232960_47234572_47234673_47234756_47235413_47237836_47238002_47238137_47238184_47238799
transcript_23694.known	chr11	+	897	3	FSM	ENSG00000134574.12	ENST00000615695.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_2	8.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAGGAGTGTTTGTTGA	47210513	True	NA	NA	False	AATAAA	-10	NA	47215057	47217411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47215264_47216335_47216473_47216857
transcript_23695.known	chr11	+	660	3	FSM	ENSG00000134574.12	ENST00000614884.1	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	60	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGCGTGGATCTTCCA	NA	False	NA	25	True	AATAAA	-15	NA	47237805	47239217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47238002_47238137_47238184_47238799
transcript_23699.known	chr11	-	2200	11	FSM	ENSG00000134575.13	ENST00000256997.9	2200	11	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_5	11.5585466214399	253	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTGCTGTTTCCTGTGCT	-47247131	False	NA	-4	True	AATGAA	-24	NA	47248906	47239304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47240250_47242722_47242899_47243017_47243125_47243238_47243322_47244734_47244868_47245304_47245395_47245473_47245573_47245681_47245835_47247640_47247728_47248037_47248134_47248675
transcript_23709.known	chr11	+	1852	10	FSM	ENSG00000025434.19	ENST00000441012.7	1852	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	29.0516780926679	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGTGGTATGGCCATAAA	47257602	True	NA	2	True	AAGAAA	-16	NA	47257995	47269033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23717.known	chr11	+	1501	9	FSM	ENSG00000025434.19	ENST00000395397.7	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	27.3104261226368	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTCCCGTGGCATTAAAAG	47247914	True	NA	-24	True	NA	NA	NA	47248915	47268812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23720.known	chr11	+	1330	9	FSM	ENSG00000025434.19	ENST00000407404.5	1330	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	38.1870396862601	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAAACATTCCTGGGAGCT	47247954	True	NA	-55	True	NA	NA	NA	47248955	47268781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23725.known	chr11	+	1480	9	FSM	ENSG00000025434.19	ENST00000405853.7	1480	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	34.6876689185076	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	47257604	True	NA	7	True	ATTAAA	-14	NA	47257997	47268843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47258130_47259179_47259260_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23731.known	chr11	+	1704	8	FSM	ENSG00000025434.19	ENST00000481020.5	1704	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	28.4827194299008	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGTCAAAGGGTTGCGAG	47247922	True	NA	-5	True	ATTAAA	-2	NA	47248923	47268831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261546_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23732.known	chr11	+	1352	8	FSM	ENSG00000025434.19	ENST00000405576.5	1352	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	34.2446182275554	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCGAGTTTTGTGGCTAC	47247914	True	NA	7	True	ATTAAA	-14	NA	47248915	47268843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47260408_47260676_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23733.nic	chr11	+	1313	8	NIC	ENSG00000025434.19	novel	1501	9	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	35.8169951678968	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247868	True	NA	9	True	ATTAAA	-16	NA	47248869	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47259790_47259980_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23741.nic	chr11	+	1126	7	NIC	ENSG00000025434.19	novel	1501	9	NA	NA	-48	0	combination_of_known_junctions	TRUE	canonical	3	15	junction_1	34.5964834436488	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	9	True	ATTAAA	-16	NA	47248867	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47261240_47261450_47261546_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23744.nic	chr11	+	1133	7	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-46	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	42.2794933218878	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247868	True	NA	9	True	ATTAAA	-16	NA	47248869	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47259790_47259980_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23747.nic	chr11	+	946	6	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	43.0970996703955	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	9	True	ATTAAA	-16	NA	47248867	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47261240_47261450_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23749.nic	chr11	+	1223	6	NIC	ENSG00000025434.19	novel	1501	9	NA	NA	-48	0	intron_retention	FALSE	canonical	3	15	junction_1	37.0264770130781	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	9	True	ATTAAA	-16	NA	47248867	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47261240_47261727_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23753.nnic	chr11	+	924	6	NIC	ENSG00000025434.19	novel	1352	8	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_2	43.7584277596899	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	47247868	True	NA	9	True	ATTAAA	-16	NA	47248869	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47259790_47259980_47261918_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23760.nic	chr11	+	1415	5	NIC	ENSG00000025434.19	novel	1704	8	NA	NA	-48	0	intron_retention	FALSE	canonical	3	15	junction_1	40.3174900012389	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGAGTTTTGTGGCTACTG	NA	False	NA	9	True	ATTAAA	-16	NA	47248867	47268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47249000_47261240_47262019_47267912_47268027_47268260_47268356_47268549
transcript_23761.known	chr11	+	667	5	FSM	ENSG00000025434.19	ENST00000531660.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	26.2428561707753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCATCTTCTCTGCAGGT	47247925	True	NA	NA	False	NA	NA	NA	47248926	47268008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47259790_47259980_47261240_47261450_47261918_47262019_47267912
transcript_23764.known	chr11	+	549	4	FSM	ENSG00000025434.19	ENST00000532630.1	549	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.4186817092631	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCGTGGCATTAAAAGAGAG	47247925	True	NA	-20	True	NA	NA	NA	47248926	47268816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47249000_47267912_47268027_47268260_47268356_47268549
transcript_23770.nic	chr11	+	2305	10	NIC	ENSG00000165915.14	novel	2330	10	NA	NA	4	0	intron_retention	FALSE	canonical	3	162	junction_1	25.3542798393652	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407539	True	NA	30	True	AATAAA	-14	NA	47408593	47416496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415059_47415160_47415287
transcript_23775.known	chr11	+	2330	10	FSM	ENSG00000165915.14	ENST00000362021.9	2330	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	67.8245740090284	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTGCCTTGGTTCTGCA	47407535	True	NA	30	True	AATAAA	-14	NA	47408589	47416496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47408663_47410086_47410396_47411925_47412040_47412345_47412468_47413399_47413508_47413596_47413687_47414424_47414476_47414776_47414910_47415038_47415160_47415287
transcript_23787.known	chr11	-	580	6	FSM	ENSG00000165916.9	ENST00000526993.1	580	6	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_5	814.530392312036	181	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGACGAGAGGCCCACGGAG	-47404941	True	NA	NA	False	NA	NA	NA	47426258	47424107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47424184_47424428_47424492_47424606_47424712_47425120_47425247_47425866_47425951_47426132
transcript_23804.known	chr11	-	2460	4	FSM	ENSG00000123444.14	ENST00000395288.6	2460	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	48.6643835080875	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	-47576564	True	NA	-2	True	AATAAA	-14	NA	47578969	47572197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578827
transcript_23806.known	chr11	-	2357	4	FSM	ENSG00000123444.14	ENST00000430070.7	2357	4	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_3	18.6726180988812	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTCTGTGTTGAAT	-47576565	True	NA	-1	True	AATAAA	-15	NA	47578970	47572196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47573791_47575592_47575700_47577410_47578029_47578932
transcript_23812.known	chr11	-	4583	14	FSM	ENSG00000149187.19	ENST00000310513.10	4583	14	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	107.541762907397	171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGAGTTACTGATT	-47534988	True	NA	1	True	ATTAAA	-19	NA	47553117	47465932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47468892_47472190_47472358_47473087_47473232_47475335_47475522_47476845_47476957_47477296_47477426_47478876_47478941_47482694_47482857_47483452_47483533_47484388_47484524_47486749_47486799_47487158_47487242_47488836_47489025_47552991
transcript_23813.known	chr11	+	2462	4	FSM	ENSG00000110536.14	ENST00000326674.10	2462	4	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	14.2361043360417	1650	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTCTTGCCACC	47557560	True	NA	11	True	AATAAA	-21	NA	47565598	47573461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47565797_47565905_47565987_47569699_47569892_47571470
transcript_23814.known	chr11	-	3079	3	FSM	ENSG00000123444.14	ENST00000533290.5	3079	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	4	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTGTGTCTGTGTTGAA	-47576384	False	NA	-2	True	AATAAA	-14	NA	47578789	47572197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47573791_47575592_47575700_47577410
transcript_23815.known	chr11	+	894	7	FSM	ENSG00000213619.11	ENST00000263774.9	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	38.7499103941616	9031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTTTGTGTGTGCTTGTA	47566137	True	NA	29	True	AATAAA	-17	NA	47579073	47584562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47579159_47579268_47579335_47580524_47580623_47580834_47580985_47582087_47582214_47582348_47582469_47584313
transcript_23816.known	chr11	+	530	3	FSM	ENSG00000213619.11	ENST00000525212.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	1161	junction_2	2	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTGTGCTTGT	47581998	False	NA	28	True	AATAAA	-16	NA	47582051	47584561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_47582214_47582348_47582469_47584313
transcript_2384.known	chr1	-	1360	7	FSM	ENSG00000053371.13	ENST00000235835.8	1360	7	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_3	17.6792408082348	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCTTTCTCTGCTGTTAA	-19307085	True	NA	-5	True	NA	NA	NA	19312144	19303964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19304387_19306017_19306148_19307001_19307102_19307313_19307411_19308157_19308263_19308454_19308643_19311826
transcript_23845.known	chr11	-	2522	13	FSM	ENSG00000109919.10	ENST00000302503.8	2522	13	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_10	92.9043713838171	4682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATGTTTATCCTGTGGC	-47627796	True	NA	-11	True	AGTAAA	-18	NA	47642559	47617316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47618920_47622700_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_23846.known	chr11	-	581	6	FSM	ENSG00000109919.10	ENST00000539759.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.067932598391	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATCCTGTGGCTT	-47642377	False	NA	-9	True	AGTAAA	-20	NA	47642452	47617314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47617540_47634671_47634735_47635544_47635572_47638698_47638806_47638966_47639052_47642378
transcript_23847.known	chr11	-	930	11	FSM	ENSG00000109919.10	ENST00000530428.1	930	11	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_8	346.696755104515	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAAGAGGTATTTCTTT	-47627844	True	NA	NA	False	AATATA	-31	NA	47642607	47622710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47622777_47625673_47625742_47627079_47627128_47628952_47629047_47630554_47630615_47631035_47631088_47631653_47631712_47634671_47634735_47638698_47638806_47638966_47639052_47642378
transcript_2385.known	chr1	+	1805	9	FSM	ENSG00000040487.13	ENST00000375155.7	1805	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	14.3652140603612	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19312359_19312728_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_23856.known	chr11	-	4035	17	FSM	ENSG00000109920.13	ENST00000263773.10	4035	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	49.6122464720154	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTATTCTGATTATG	-47761666	True	NA	2	True	AATAAA	-43	NA	47767341	47716493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47717513_47719928_47720087_47722975_47723317_47724027_47724173_47724467_47724779_47731373_47731562_47732536_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_23857.known	chr11	-	2515	11	FSM	ENSG00000109920.13	ENST00000534003.5	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	44.322116375462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATCACAAAAAAAGAGAAA	-47761611	True	NA	NA	False	AATGAA	-26	NA	47767286	47731839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47732671_47734024_47734130_47736615_47736741_47743952_47744164_47746055_47746395_47750915_47751037_47751142_47751291_47752915_47753103_47754527_47754665_47765269_47765363_47767068
transcript_23859.known	chr11	-	491	2	FSM	ENSG00000109920.13	ENST00000544590.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCCACCTCTCTACCTT	-47746184	False	NA	NA	False	NA	NA	NA	47746199	47743816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47744164_47746055
transcript_23860.known	chr11	-	1537	3	FSM	ENSG00000030066.13	ENST00000526870.1	1537	3	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	77	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTCTTGCCTGGA	-47848510	False	NA	-3	True	ATTAAA	-40	NA	47848555	47839500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_47840589_47847847_47847960_47848218
transcript_23862.known	chr11	-	2831	17	FSM	ENSG00000149136.9	ENST00000278412.7	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	893	junction_10	110.060335015618	2974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTCCTCATGCTTTCTT	-57312421	True	NA	-23	True	AATAAA	-19	NA	57335892	57325987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57326479_57326702_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330854_57330928_57331667_57331890_57332151_57332281_57332382_57332487_57332624_57332856_57332958_57333150_57333434_57333541_57334462_57334649_57335067_57335241_57335729
transcript_23867.known	chr11	-	675	8	FSM	ENSG00000149136.9	ENST00000635721.1	675	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	521.884692871003	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAGTAAAGGTAAAGA	-57307456	False	NA	-19	True	AATACA	-20	NA	57330927	57326871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57326890_57327425_57327515_57327711_57327883_57328296_57328427_57330092_57330139_57330290_57330430_57330732_57330742_57330854
transcript_23874.known	chr11	-	2619	14	FSM	ENSG00000134802.18	ENST00000395124.6	2619	14	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_12	23.2361175707844	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424591	True	NA	0	True	AATAAA	-20	NA	57427121	57406953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426353_57426587_57426653_57427061
transcript_23875.nic	chr11	-	2703	14	NIC	ENSG00000134802.18	novel	2619	14	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_12	37.7959329079029	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTTTCCATCTCTCTA	-57424638	True	NA	0	True	AATAAA	-20	NA	57427168	57406953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_57407897_57409174_57409299_57409934_57410122_57414614_57414732_57414932_57415107_57416572_57416671_57417747_57417888_57420971_57421065_57421296_57421374_57423981_57424029_57425540_57425671_57425988_57426390_57426587_57426653_57427061
transcript_23897.known	chr11	-	2358	15	FSM	ENSG00000149150.9	ENST00000528450.5	2358	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	30.6707332411702	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCTGGTGTGCGCCTG	-57514436	False	NA	-7	True	AATAAA	-14	NA	57514885	57484535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57514780
transcript_23898.known	chr11	-	2514	15	FSM	ENSG00000149150.9	ENST00000278426.8	2514	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	19.9377858881684	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGGTGTGCGCCTGTC	-57515253	True	NA	-5	True	AATAAA	-16	NA	57515702	57484533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57485243_57487094_57487219_57488915_57488990_57489250_57489393_57491223_57491363_57491590_57491627_57491715_57491863_57493992_57494172_57496030_57496165_57497752_57497846_57500778_57500856_57500987_57501044_57501151_57501330_57513957_57514125_57515443
transcript_239.known	SIRV3	+	2018	3	FSM	SIRV3A	SIRV303	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	2183	junction_1	515	1478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4568_4780_6057
transcript_2390.known	chr1	+	1548	8	FSM	ENSG00000040487.13	ENST00000400548.6	1548	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	24.164402896553	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311155	True	NA	24	True	AATAAA	-34	NA	19312340	19329300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19312359_19312728_19312890_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_2391.nnic	chr1	+	1652	8	NIC	ENSG00000040487.13	novel	1805	9	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	25.1671960119128	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTACCTCCCCATGAGACC	19311116	True	NA	8	True	AATAAA	-18	NA	19312301	19329284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_19312359_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_23919.known	chr11	-	530	3	FSM	ENSG00000134809.9	ENST00000525158.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	487.5	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTGAAGACTGCCAGGCC	-57522239	True	NA	-18	True	AATAAA	-22	NA	57530734	57528640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57528919_57530118_57530294_57530657
transcript_23925.known	chr11	-	668	3	FSM	ENSG00000134809.9	ENST00000257245.9	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_2	84.5	10513	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGTGCAAAGCAGTGTGC	-57522259	True	NA	-8	True	TATAAA	-19	NA	57530754	57528463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57528919_57530118_57530235_57530657
transcript_23926.known	chr11	-	486	3	FSM	ENSG00000134809.9	ENST00000525587.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	524.5	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCTAGGCTCTCTGTAGA	NA	False	NA	-3	True	AATAAA	-37	NA	57530803	57528625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57528919_57530118_57530235_57530726
transcript_23930.nic	chr11	+	896	5	NIC	ENSG00000214872.9	novel	1695	8	NA	NA	6160	2	intron_retention	FALSE	canonical	1	2	junction_4	1.11803398874989	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCCCTCAGTGCTCTC	57543732	False	NA	NA	False	ATTAAA	-21	NA	57543754	57550274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_57543921_57545880_57546037_57546232_57546348_57546500_57546653_57549967
transcript_23933.known	chr11	-	1219	4	FSM	ENSG00000156587.16	ENST00000287156.9	1219	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_3	60.0721788073869	1115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGAGTGCAGCTGAGTC	-57564461	True	NA	-11	True	ATTAAA	-13	NA	57567672	57551661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567584
transcript_23935.known	chr11	-	1573	4	FSM	ENSG00000156587.16	ENST00000340573.8	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	201.490005266321	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCAGCTGAGTCTTTGAT	-57568023	True	NA	-5	True	ATTAAA	-19	NA	57568284	57551655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57552510_57554436_57554624_57560336_57560433_57567848
transcript_23939.known	chr11	+	1830	8	FSM	ENSG00000149131.17	ENST00000278407.9	1830	8	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	162.783692709819	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	57595371	True	NA	16	True	AATAAA	-17	NA	57597684	57614848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57598248_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23942.nic	chr11	+	2026	7	ISM	ENSG00000149131.17	ENST00000278407.9	1830	8	330	0	-169	0	3prime_fragment	FALSE	canonical	3	428	junction_2	69.184937345896	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTCTCTGCTTTGCCTTTG	57595701	False	NA	16	True	AATAAA	-17	NA	57598014	57614848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_57598322_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23943.known	chr11	+	1723	6	FSM	ENSG00000149131.17	ENST00000531605.2	1723	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	264.995094294215	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTCTCTGCTTTGCCT	57593275	True	NA	13	True	AATAAA	-14	NA	57598222	57614845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57602034_57602170_57605602_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23944.known	chr11	+	1004	6	FSM	ENSG00000149131.17	ENST00000531133.5	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	216.239126894279	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGCAGGATCAGGTTAG	57593323	False	NA	NA	False	NA	NA	NA	57598270	57614581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23947.known	chr11	+	907	4	FSM	ENSG00000149131.17	ENST00000531797.5	907	4	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	285.899749329493	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCTTTCTCTAGTTCAAG	57593285	True	NA	-42	True	NA	NA	NA	57598232	57614790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598322_57602034_57602170_57611716_57611937_57614327
transcript_23948.known	chr11	+	841	3	FSM	ENSG00000149131.17	ENST00000528996.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	315.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTTTGTTTTTTTAT	57593281	True	NA	25	True	AATAAA	-26	NA	57598228	57614857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57598329_57611725_57611937_57614327
transcript_23949.known	chr11	+	1751	7	FSM	ENSG00000149131.17	ENST00000378324.6	1751	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	210.691717919808	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTCTCTGCTTTGCCTTT	57595376	True	NA	15	True	AATAAA	-16	NA	57597689	57614847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57597723_57599878_57600378_57602034_57602170_57606009_57606214_57606407_57606548_57611716_57611937_57614327
transcript_23951.known	chr11	+	1828	3	FSM	ENSG00000172409.7	ENST00000533682.2	1828	3	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	1	923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTTGGTATAATTTATTT	57653647	True	NA	32	True	AATAAA	-19	NA	57657761	57661865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57657861_57659454_57660083_57660764
transcript_23952.known	chr11	+	1634	3	FSM	ENSG00000172409.7	ENST00000302731.4	1634	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	95	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTTGGTATAATTTATT	57653648	True	NA	31	True	AATAAA	-18	NA	57657762	57661864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57657861_57659454_57659891_57660764
transcript_23953.known	chr11	+	4443	12	FSM	ENSG00000156599.11	ENST00000287169.8	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_2	44.3343793244322	191	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCGCCCCCTGACTTGTG	57667941	False	NA	11	True	AATAAA	-18	NA	57668113	57701182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57668188_57672020_57673195_57682421_57682544_57688507_57688666_57690030_57690204_57690334_57690438_57692610_57692703_57693782_57693916_57695919_57696044_57696760_57696874_57698558_57699419_57699865
transcript_23959.known	chr11	-	1203	5	FSM	ENSG00000156603.20	ENST00000431606.5	1099	5	-108	4	-102	0	multi-exon	FALSE	canonical	3	455	junction_2	23.6259920426635	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGAAGTGTGACTGCC	-57712313	False	NA	-5	True	TTTAAA	-25	NA	57712323	57703713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57704107_57704301_57704397_57704718_57704816_57704972_57705230_57711962
transcript_2396.known	chr1	+	2175	8	FSM	ENSG00000040487.13	ENST00000375153.8	2175	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	15.0847943442449	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTTCTGTTGCTCCT	19311140	True	NA	24	True	AATAAA	-34	NA	19312325	19329300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19312890_19317599_19317842_19324632_19324763_19325494_19325583_19326244_19326388_19326530_19326624_19327226_19327413_19328571
transcript_23960.known	chr11	-	1259	5	FSM	ENSG00000156603.20	ENST00000645681.2	1259	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	213.151354675498	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGCAATTTGTCTG	-57708972	True	NA	-79	True	NA	NA	NA	57712214	57703787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_57704107_57704301_57704636_57704718_57704816_57704972_57705230_57711962
transcript_23965.known	chr11	+	5380	20	FSM	ENSG00000288534.1	ENST00000673810.1	5380	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	312.65030955763	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTAAAGTGTGTATGTG	57705903	True	NA	8	True	AATAAA	-1	NA	57712583	57818431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57789036_57789156_57791384_57791674_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806460_57806479_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_23979.known	chr11	+	1645	8	FSM	ENSG00000213593.10	ENST00000278422.9	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_2	144.546016964869	1182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705912	True	NA	20	True	AATAAA	-22	NA	57712592	57740973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57737912_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_23980.known	chr11	+	1521	7	FSM	ENSG00000213593.10	ENST00000378312.8	1521	7	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	267.958744751667	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCGCGTTTGTGTGTTTCT	57705922	True	NA	20	True	AATAAA	-22	NA	57712602	57740973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_23981.known	chr11	+	1697	8	FSM	ENSG00000213593.10	ENST00000529403.1	1697	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	305.977323422798	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATTGCGCGTTTGTGTGT	57705933	True	NA	16	True	AATAAA	-18	NA	57712613	57740969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57712808_57737607_57737669_57737835_57738027_57738353_57738431_57738663_57738771_57738973_57739040_57739130_57739261_57740098
transcript_23982.known	chr11	+	5727	17	FSM	ENSG00000198561.16	ENST00000529986.5	5727	17	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	175.398998268947	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762047_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_23983.known	chr11	+	5800	17	FSM	ENSG00000198561.16	ENST00000426142.6	5800	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	202.186476040684	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGATGGTCCTGTCTTGTT	57748902	True	NA	5	True	ATTAAA	-18	NA	57761796	57819178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57762120_57794009_57794082_57795576_57795730_57796456_57796993_57801732_57802197_57803620_57803805_57804662_57804781_57805881_57806036_57806914_57806984_57808164_57808293_57808389_57808541_57809273_57809467_57810108_57810224_57811398_57811487_57814310_57814374_57815393_57815501_57816296
transcript_24.known	ERCC-00054	+	256	1	FSM	ERCC-00054A	DQ516731	256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00054_+_0_300
transcript_24001.known	chr11	+	469	4	FSM	ENSG00000211450.11	ENST00000528798.1	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	1304.13351395562	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAGTAATAGAGTAAAAC	57706728	False	NA	-6	True	AATAAA	-16	NA	57741681	57743038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742228_57742862
transcript_24002.known	chr11	+	1192	4	FSM	ENSG00000211450.11	ENST00000534355.6	1192	4	0	0	0	0	multi-exon	FALSE	canonical	3	2543	junction_3	180.962856839617	12780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACTGTATCTTTTTCAAC	57706537	True	NA	1	True	AGTAAA	-20	NA	57741490	57743550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808_57741955_57742116_57742248_57742862
transcript_24003.known	chr11	+	833	3	FSM	ENSG00000211450.11	ENST00000388857.8	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	2735	junction_2	125	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGACCTTGTCTTTGTCC	57706618	True	NA	6	True	ATTAAA	-15	NA	57741571	57742657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808_57741955_57742116
transcript_24004.known	chr11	+	1454	2	FSM	ENSG00000211450.11	ENST00000533321.1	1454	2	0	0	0	0	multi-exon	FALSE	canonical	3	2985	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATCTTAAGGGATGGAC	57706559	True	NA	13	True	AATAAA	-35	NA	57741512	57743057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_57741718_57741808
transcript_24008.known	chr11	-	1879	9	FSM	ENSG00000110031.13	ENST00000528954.5	1879	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	3.64005494464026	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTGTCATATTTGTTTG	-58577947	True	NA	0	True	AATAAA	-21	NA	58578166	58526870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58564154_58564202_58570555_58570714_58578018
transcript_24009.known	chr11	-	1751	8	FSM	ENSG00000110031.13	ENST00000528489.1	1751	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	3.31354671564092	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTGGCTCACTGTCTTA	-58578001	True	NA	NA	False	NA	NA	NA	58578220	58527038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_58527724_58528042_58528192_58549785_58549868_58549972_58550147_58551064_58551233_58554840_58554941_58570555_58570714_58577985
transcript_24010.nnic	chr11	-	1752	4	NNC	ENSG00000156689.7	novel	566	5	NA	NA	-1638	-60185	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0.816496580927726	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAAGTTCCCGAGTTTAT	-58905699	True	NA	-4	True	AATATA	-16	NA	58905853	58894914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_58895627_58899651_58899759_58904155_58904262_58905026
transcript_24014.nic	chr11	+	1652	7	NIC	ENSG00000166840.14	novel	1627	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	4.06885187191123	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATCTGTATGGATACTT	58927360	True	NA	10	True	AATAAA	-18	NA	58927631	58956406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_58927830_58943542_58943667_58947045_58947166_58947857_58947966_58954769_58954897_58955175_58955354_58955609
transcript_24015.known	chr11	-	643	2	FSM	ENSG00000255523.1	ENST00000531918.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTACTTCTGGATGGTCCCC	NA	False	NA	NA	False	NA	NA	NA	58928689	58917014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_58917285_58928316
transcript_24023.nic	chr11	+	1146	2	ISM	ENSG00000255151.2	ENST00000527482.2	909	5	7462	-385	7462	385	3prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATATGGATACTTTATTG	59093744	True	NA	NA	False	AATAAA	-23	NA	59093768	59095171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_59094112_59094368
transcript_24024.nnic	chr11	+	910	2	NNC	ENSG00000255151.2	novel	909	5	NA	NA	7463	380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATCTATATGGATACTT	59093745	True	NA	NA	False	AATAAA	-18	NA	59093769	59095166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_59093882_59094368
transcript_24025.known	chr11	+	3506	4	FSM	ENSG00000189057.11	ENST00000343597.4	3506	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	3.68178700572909	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTAGAGTATTGGAGGC	59106428	True	NA	15	True	AATAAA	-25	NA	59107236	59127412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59107297_59108667_59108713_59109539_59109707_59124178
transcript_24030.nnic	chr11	-	1181	5	NNC	ENSG00000245571.7	novel	2063	4	NA	NA	-92	773	intron_retention	FALSE	canonical	1	1	junction_1	13.9530462623758	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTTGGGTATTTCTT	-59142808	False	NA	NA	False	ATTAAA	-21	NA	59143107	59133247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_59133650_59134577_59134684_59136056_59136282_59139956_59140168_59142870
transcript_24034.known	chr11	+	3592	4	FSM	ENSG00000166801.17	ENST00000361723.7	3592	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	26.0426999794995	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGTATTTGTCAGCCTC	59143518	True	NA	31	True	ATTAAA	-15	NA	59144778	59155036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59144897_59145826_59145857_59148796_59148954_59151749
transcript_24036.known	chr11	+	4203	7	FSM	ENSG00000166801.17	ENST00000676340.1	4203	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.4890690794805	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACATTGCTTCTGTTTGT	59142871	False	NA	-17	True	TATAAA	-44	NA	59142910	59154988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59142947_59143082_59143305_59143496_59143696_59144537_59144897_59145826_59145857_59148835_59148954_59151749
transcript_24039.known	chr11	-	880	4	FSM	ENSG00000245571.7	ENST00000531708.1	880	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	11.0453610171873	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACACCGGCAAGGAATGGA	-59142716	True	NA	NA	False	NA	NA	NA	59143015	59135289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59135589_59136056_59136282_59139956_59140168_59142870
transcript_2404.known	chr1	-	1462	9	FSM	ENSG00000077549.19	ENST00000433834.5	1462	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_8	635.934892500797	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGGCTCCGAGCCTGC	-19484654	False	327	-27	True	AATAAA	-15	NA	19484664	19339358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19484189
transcript_24044.nic	chr11	-	1054	3	ISM	ENSG00000245571.7	ENST00000531708.1	880	4	-92	386	-92	-386	5prime_fragment	FALSE	canonical	3	23	junction_2	6	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTTTATATATATATGTT	-59142808	False	NA	NA	False	ATTAAA	-22	NA	59143107	59135675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_59136282_59139956_59140168_59142870
transcript_24046.nnic	chr11	+	1002	3	NNC	ENSG00000287264.1	novel	1137	2	NA	NA	-8195	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTACCGTGTTTTGAATG	NA	False	NA	NA	False	AATAAA	-23	NA	59537406	59558882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_59537572_59537744_59537819_59558119
transcript_24048.known	chr11	-	4129	19	FSM	ENSG00000166889.14	ENST00000300146.10	4129	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	10.6985922692292	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGCCTGCATTTCTACT	-59667051	True	NA	-2	True	AATAAA	-22	NA	59669037	59636715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59638412_59639047_59639198_59639291_59639384_59642879_59643036_59647753_59647914_59649461_59649611_59650753_59650814_59651543_59651642_59652463_59652588_59652837_59653019_59653982_59654073_59655522_59655741_59655955_59656046_59656498_59656601_59657529_59657725_59658865_59658947_59659251_59659470_59666852_59666965_59668880
transcript_24049.known	chr11	-	4713	14	FSM	ENSG00000110048.12	ENST00000263847.6	4713	14	0	0	0	0	multi-exon	TRUE	canonical	3	353	junction_3	45.8364729066353	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTTGTCTGATTCACT	-59611052	True	NA	-1	True	ATTAAA	-18	NA	59615774	59574397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59576720_59576804_59577026_59578148_59578331_59580173_59580270_59581450_59581555_59593603_59593725_59594009_59594256_59600495_59600628_59600818_59600874_59601282_59601386_59601639_59601839_59608483_59608735_59610380_59610590_59615302
transcript_24051.known	chr11	+	440	4	FSM	ENSG00000255139.2	ENST00000531108.1	440	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAAGGCTATGTCTCTC	59616410	False	NA	NA	False	NA	NA	NA	59616428	59639542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59616475_59620414_59620473_59635419_59635533_59639319
transcript_24053.known	chr11	+	601	2	FSM	ENSG00000255139.2	ENST00000531311.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAACACAACTGAAATAAAC	59620395	False	NA	NA	False	AATATA	-5	NA	59620413	59639861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59620473_59639319
transcript_24054.known	chr11	+	6154	11	FSM	ENSG00000166900.17	ENST00000337979.9	6154	11	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_10	63.7574309394599	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTATGTACTGTTGTTTTTT	59748580	True	NA	5	True	AATAAA	-16	NA	59755375	59805878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872_59788948_59790518_59790587_59792106_59792216_59793098_59793173_59793379_59793515_59795371_59795483_59797282_59797397_59800854
transcript_24055.known	chr11	+	690	4	FSM	ENSG00000166900.17	ENST00000530498.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_2	57.1392062325763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTAGTTTTGTGACTTG	59748663	True	NA	6	True	ATTAAA	-16	NA	59755458	59789201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_59755636_59773210_59773295_59787036_59787137_59788872
transcript_24056.known	chr11	-	405	1	FSM	ENSG00000234964.4	ENST00000524732.2	405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAATTCCATCATCAC	NA	False	NA	NA	False	AAAAAG	-4	NA	59781722	59781317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59781300_59781700
transcript_24064.known	chr11	-	574	4	FSM	ENSG00000166902.5	ENST00000534340.1	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	597.618235628361	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCGCGGGACTCTAGAG	-59809925	False	NA	-20	True	NA	NA	NA	59810300	59806534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810239
transcript_24070.known	chr11	-	1083	4	FSM	ENSG00000166902.5	ENST00000300151.5	1083	4	0	0	0	0	multi-exon	FALSE	canonical	3	1277	junction_1	30.825674724525	6046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAACTTCTCATTGGTCAT	-59801363	True	NA	-5	True	AATAAA	-21	NA	59810778	59806139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59806833_59807700_59807850_59809854_59809921_59810603
transcript_24071.known	chr11	-	557	2	FSM	ENSG00000166902.5	ENST00000531802.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	1351	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCTCACGCCTGTAATCA	-59801358	True	NA	NA	False	NA	NA	NA	59810773	59809533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_59809921_59810603
transcript_24072.known	chr11	+	1522	7	FSM	ENSG00000110079.19	ENST00000337908.5	1522	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCATGTGCTACCTAC	NA	False	NA	NA	False	AATAAA	-16	NA	60280665	60308970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60280717_60292224_60292385_60297196_60297326_60301000_60301058_60302558_60302718_60306099_60306202_60308106
transcript_24073.known	chr11	+	1488	6	FSM	ENSG00000110079.19	ENST00000532114.6	1488	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTTCATGTGCTACCTAC	NA	False	NA	NA	False	AATAAA	-16	NA	60280540	60308970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60280717_60292224_60292385_60297196_60297326_60301000_60301058_60306099_60306202_60308106
transcript_24074.known	chr11	+	1187	5	FSM	ENSG00000166926.9	ENST00000684409.1	1187	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAATACTTATTTTGTTA	NA	False	NA	NA	False	AATAAA	-21	NA	60327254	60341341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60327409_60334881_60335043_60337740_60337948_60339865_60339965_60340775
transcript_24075.known	chr11	+	1961	7	FSM	ENSG00000166961.15	ENST00000405633.4	1961	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.52752523165195	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCTTGTTGCAATGAC	NA	False	NA	NA	False	AATAAA	-21	NA	60756866	60776733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60757059_60763705_60763959_60767532_60767656_60771290_60771348_60773391_60773485_60773836_60773951_60775604
transcript_24078.known	chr11	+	1488	5	FSM	ENSG00000110104.13	ENST00000535217.1	1488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.56164970966	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGGAGAGAAAACATAATA	60835676	True	NA	-17	True	AATACA	-43	NA	60842144	60851046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60842405_60842700_60842883_60847923_60848054_60849939_60850015_60850205
transcript_24083.known	chr11	+	1851	4	FSM	ENSG00000110104.13	ENST00000227520.10	1851	4	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_2	20.704266871026	992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACGTGTCCAATGGGGGAA	60835644	True	NA	18	True	AATAAA	-14	NA	60842112	60851081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60842883_60847923_60848054_60849939_60850015_60850205
transcript_24085.known	chr11	-	2337	16	FSM	ENSG00000110107.9	ENST00000227524.9	2337	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_12	13.2222035480727	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCATGTCCCTGCGGTT	-60892475	True	NA	39	True	AATAAA	-20	NA	60906585	60890546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60891264_60897845_60897952_60898100_60898272_60898540_60898627_60898861_60898932_60899148_60899305_60900581_60900692_60900853_60900930_60901294_60901370_60901498_60901541_60902402_60902466_60902582_60902657_60902739_60902882_60903458_60903536_60903711_60903862_60906363
transcript_24086.known	chr11	-	405	2	FSM	ENSG00000256944.1	ENST00000543275.1	405	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTCGTGCAGCTTTATT	NA	False	NA	NA	False	AATAAA	-23	NA	60914052	60913165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60913478_60913959
transcript_24089.known	chr11	+	2129	4	FSM	ENSG00000110108.10	ENST00000227525.8	2129	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	13.735598518691	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGGATTGCTTCCATGTC	60912366	True	NA	23	True	AATAAA	-16	NA	60914157	60923443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_60914269_60919685_60919931_60920885_60920989_60921773
transcript_24091.known	chr11	-	1392	8	FSM	ENSG00000110446.12	ENST00000536491.2	1392	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	20.4410551267266	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGAGGGGGCCTGGATGGG	-60947773	False	NA	23	True	NA	NA	NA	60947819	60937059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_60937374_60937869_60938026_60939479_60939639_60941121_60941291_60942034_60942146_60943688_60943837_60946531_60946822_60947774
transcript_24095.known	chr11	-	506	5	FSM	ENSG00000167987.11	ENST00000538036.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	74.6705263139346	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCGTGGAAAAGCTCCAGGA	-61161070	False	1100	NA	False	NA	NA	NA	61161136	61132443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161080
transcript_24096.known	chr11	-	2673	5	FSM	ENSG00000167987.11	ENST00000301765.10	2673	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	20.3100960115899	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTGGTGTTGCTGGG	-61160326	True	NA	-5	True	AATAAA	-16	NA	61161426	61130256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61132540_61133254_61133338_61134035_61134208_61138736_61138836_61161390
transcript_24097.known	chr11	+	1384	9	FSM	ENSG00000229183.10	ENST00000378149.9	1384	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.40725329260975	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61222346	61231694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61222457_61222942_61223106_61225338_61225457_61226325_61226445_61227119_61227320_61228670_61228788_61229918_61230064_61230165_61230265_61231381
transcript_24098.known	chr11	+	1382	9	FSM	ENSG00000256713.8	ENST00000312403.10	1382	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.98956518577535	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTTGTGGAGCTGCTT	NA	False	NA	NA	False	AATAAA	-18	NA	61241174	61251444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61241283_61241768_61241932_61244164_61244283_61245151_61245271_61245945_61246146_61248418_61248536_61249668_61249814_61249915_61250015_61251131
transcript_24100.known	chr11	-	3536	20	FSM	ENSG00000167992.14	ENST00000335613.10	3536	20	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	13.4646351191544	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGCACTGCTCATTCACC	-61294860	True	NA	-5	True	ATTAAA	-20	NA	61295316	61258285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61259313_61264486_61264578_61264955_61265039_61265121_61265213_61267461_61267545_61268921_61269019_61271674_61271761_61273198_61273317_61274498_61274585_61276592_61276681_61278393_61278477_61280623_61280718_61280792_61281236_61281785_61281915_61282788_61282906_61286313_61286431_61290798_61290928_61291263_61291354_61291481_61291577_61294927
transcript_24103.known	chr11	-	4245	27	FSM	ENSG00000167986.15	ENST00000301764.12	4245	27	0	0	0	0	multi-exon	TRUE	canonical	3	1480	junction_18	155.297238380213	404	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACATTTGTTTTTGCTTT	-61313039	True	NA	NA	False	AATAAA	-19	NA	61333105	61299450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61300220_61300808_61300933_61302256_61302360_61302581_61302752_61303045_61303156_61303864_61304036_61308982_61309078_61309795_61309961_61310294_61310419_61311783_61311896_61311988_61312085_61313498_61313707_61313861_61313970_61314046_61314211_61314307_61314487_61316284_61316394_61316491_61316568_61321594_61321698_61322295_61322413_61323010_61323095_61323978_61324138_61325610_61325709_61326778_61326894_61329362_61329585_61329957_61330075_61331542_61331692_61332907
transcript_24107.nic	chr11	+	2426	19	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_2	54.4446712013418	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	61331898	True	NA	NA	False	AAAAAG	-4	NA	61333229	61346890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_61333330_61333548_61333651_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_24110.known	chr11	+	4678	18	FSM	ENSG00000149476.16	ENST00000394900.8	4678	18	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	23.474347332758	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGGGCCAGGCAAGCAG	61331896	True	NA	NA	False	NA	NA	NA	61333227	61349242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343341_61343459_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_24114.nnic	chr11	+	2219	17	NIC	ENSG00000149476.16	novel	4678	18	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_10	46.1569587792567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAATAAACTATAATACAT	61331886	True	NA	NA	False	AAAAAG	-4	NA	61333217	61346890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_61333330_61334619_61334732_61337940_61338131_61339065_61339177_61339253_61339436_61341435_61341515_61341822_61341913_61342460_61342496_61342573_61342659_61342754_61342845_61343855_61343976_61344135_61344274_61345259_61345367_61345461_61345566_61345711_61345746_61345856_61345947_61346350
transcript_24126.known	chr11	-	2584	7	FSM	ENSG00000162144.10	ENST00000294072.9	2584	7	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_1	37.9809893967437	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTCTTTGTTCAGGCTGC	-61361035	True	NA	-2	True	ATTAAA	-17	NA	61361882	61348804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61350423_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_24127.known	chr11	-	1803	7	FSM	ENSG00000162144.10	ENST00000447532.6	1803	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	29.9666481275434	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCGAGTTTCATTAAATAT	-61361900	False	NA	-35	True	NA	NA	NA	61361913	61348837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61349644_61350990_61351148_61352984_61353140_61353783_61353993_61356529_61356729_61357732_61357829_61361732
transcript_24139.known	chr11	+	1475	5	FSM	ENSG00000149483.13	ENST00000278826.11	1475	5	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	23.7907545067406	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAAATTCTTATGTCC	61359804	True	NA	23	True	AATAAA	-33	NA	61362373	61369509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367922_61367999_61368596
transcript_24140.known	chr11	+	587	4	ISM	ENSG00000149483.13	ENST00000693557.1	1851	5	233	1629	0	498	5prime_fragment	FALSE	canonical	2	5	junction_3	101.434160364686	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAAAGCCGTTAATCTCA	61359816	True	NA	NA	False	NA	NA	NA	61362385	61367540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_61362421_61364251_61364519_61366044_61366217_61367427
transcript_24141.known	chr11	+	611	2	ISM	ENSG00000149483.13	ENST00000534963.5	740	4	17	1755	0	-1755	intron_retention	FALSE	canonical	3	215	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATTGCTTAAGCCCAGG	61359791	True	NA	NA	False	NA	NA	NA	61362360	61364802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_61362421_61364251
transcript_24146.known	chr11	+	1053	5	FSM	ENSG00000187049.11	ENST00000515837.7	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	161.185452197151	606	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGGGTTGCAGCCTTTCCT	61388442	True	NA	17	True	AATAAA	-17	NA	61392586	61398846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61392666_61393230_61393333_61393883_61393977_61397773_61397976_61398269
transcript_2416.known	chr1	-	1675	9	FSM	ENSG00000077549.19	ENST00000264202.8	1675	9	0	0	0	0	multi-exon	FALSE	canonical	3	1555	junction_8	173.515444197339	4936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGGCCTTCTGTGTTCC	-19456823	True	NA	-17	True	AATAAA	-21	NA	19485539	19338774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19339618_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_2417.known	chr1	-	579	5	FSM	ENSG00000077549.19	ENST00000459967.6	579	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	812.187324451693	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGCAGCCTTACCAGACAG	-19456823	True	NA	NA	False	NA	NA	NA	19485539	19356654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19485435
transcript_24172.known	chr11	-	3650	10	FSM	ENSG00000149532.16	ENST00000394888.8	3650	10	0	0	0	0	multi-exon	TRUE	canonical	3	166	junction_5	85.7230683331181	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGCATTGAATAGATTT	NA	False	NA	63	True	AATAAA	-23	NA	61430031	61402648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419921_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_24173.known	chr11	-	3487	10	FSM	ENSG00000149532.16	ENST00000439958.8	3487	10	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	68.3017994087208	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTATACTGCATTGTAT	-61422958	True	NA	-17	True	AATAAA	-18	NA	61429975	61402728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61404705_61410937_61411106_61411768_61411938_61415665_61415785_61416104_61416520_61419948_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429913
transcript_2418.known	chr1	-	1686	10	FSM	ENSG00000077549.19	ENST00000375142.5	1686	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	759.630823265039	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAGAAAAGAAA	-19456769	True	NA	-65	True	AAGAAA	-36	NA	19485485	19338822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19339618_19342751_19342865_19344357_19344435_19345186_19345253_19356634_19356752_19357421_19357564_19378539_19378654_19385504_19385627_19419660_19419751_19485435
transcript_24195.known	chr11	+	555	5	FSM	ENSG00000167985.7	ENST00000359614.9	555	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	261.916494325959	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AACAAAAACAAAGAGCAGAG	61419051	True	NA	NA	False	AATGAA	-31	NA	61430124	61446005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438244_61438343_61445940
transcript_24196.known	chr11	+	559	5	FSM	ENSG00000167985.7	ENST00000537782.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	263.141953135565	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCACGTTGAGCTGTGCT	61419051	True	NA	NA	False	AAAACA	-45	NA	61430124	61446059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61438294_61438343_61445940
transcript_24206.known	chr11	+	1077	5	FSM	ENSG00000167985.7	ENST00000542794.5	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	245.297141238947	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTCTGCCACGAGAGGG	61418968	True	NA	110	True	NA	NA	NA	61430041	61446342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61436760_61436961_61437624_61437849_61438003_61438114_61445940
transcript_24214.known	chr11	+	1186	4	FSM	ENSG00000167985.7	ENST00000301761.7	1186	4	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_3	47.377913278939	3227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACAATTTCCCAGCCCTC	61419050	True	NA	18	True	ATTAAA	-20	NA	61430123	61446733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61438003_61438114_61445940
transcript_24221.known	chr11	+	488	4	FSM	ENSG00000162148.11	ENST00000366212.8	488	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.5797734872612	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGACATCACTATCAGGG	NA	False	NA	7	True	AATAAA	-19	NA	61488841	61490931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61488963_61489781_61489947_61490500_61490585_61490813
transcript_24225.known	chr11	+	438	3	FSM	ENSG00000167985.7	ENST00000543265.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	239.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACTTATGATGGACGTT	61419070	True	NA	NA	False	NA	NA	NA	61430143	61446115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61437624_61437849_61445940
transcript_24229.known	chr11	+	835	2	FSM	ENSG00000167985.7	ENST00000542074.1	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAGAATTATTAAAGCA	61419031	True	NA	-18	True	TTTAAA	-19	NA	61430104	61446697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61430183_61445940
transcript_24230.known	chr11	-	574	5	FSM	ENSG00000149532.16	ENST00000450000.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	191.745925641198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGAAAGTTCTTAATGGAG	-61422905	True	NA	NA	False	NA	NA	NA	61429922	61420034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61420095_61420469_61420574_61421389_61421609_61429181_61429291_61429840
transcript_24231.known	chr11	+	1128	3	FSM	ENSG00000255931.2	ENST00000668526.1	1128	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTGCTGAATAATTTCA	NA	False	NA	NA	False	AATATA	-17	NA	61499160	61506649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61499328_61499762_61499836_61505761
transcript_24232.known	chr11	+	1193	3	FSM	ENSG00000255931.2	ENST00000664822.1	1193	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATGTGCTGAATAATTTCA	NA	False	NA	NA	False	AATATA	-17	NA	61499162	61506649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61499334_61499762_61499897_61505761
transcript_24241.known	chr11	-	1692	4	FSM	ENSG00000134825.16	ENST00000543510.1	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4190.79867752623	1570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCCTGTCTGGGGCCCATT	-61792788	False	NA	-5	True	AATAAA	-15	NA	61792802	61789130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61791462
transcript_24249.known	chr11	-	578	4	FSM	ENSG00000134825.16	ENST00000537328.6	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	5881	junction_3	1484.71164428204	31217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGTCTGGGCCTACCCTT	-61769027	True	NA	NA	False	NA	NA	NA	61792599	61788948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789922_61790492_61790603_61792555
transcript_24250.known	chr11	-	468	4	FSM	ENSG00000134825.16	ENST00000257262.12	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	3775.35246331018	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769029	True	NA	-4	True	AATAAA	-16	NA	61792601	61789129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789715_61789922_61790492_61790603_61792555
transcript_24251.known	chr11	-	517	4	FSM	ENSG00000134825.16	ENST00000541893.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	3449.25798783835	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769008	True	NA	-4	True	AATAAA	-16	NA	61792580	61789129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789991_61790422_61790603_61792555
transcript_24252.known	chr11	-	395	3	FSM	ENSG00000134825.16	ENST00000535297.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	2860	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769044	True	NA	-4	True	AATAAA	-16	NA	61792616	61789129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61790374_61790603_61792555
transcript_24253.known	chr11	-	579	4	FSM	ENSG00000134825.16	ENST00000545210.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	3434.3198259141	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTCTGGGGCCCATTC	-61769022	True	NA	-4	True	AATAAA	-16	NA	61792594	61789129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61789236_61789784_61789991_61790374_61790603_61792555
transcript_24255.known	chr11	+	2964	12	FSM	ENSG00000134824.14	ENST00000257261.10	2964	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	750.437745530804	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61811328	True	NA	21	True	AATAAA	-20	NA	61816255	61867354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61816427_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_24256.known	chr11	+	1689	12	FSM	ENSG00000134824.14	ENST00000522056.5	1689	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	801.568833626484	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGTGGCCACCGGGGGTG	61811476	False	NA	NA	False	NA	NA	NA	61816403	61865957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61816697_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_24257.known	chr11	+	3091	12	FSM	ENSG00000134824.14	ENST00000278840.9	3091	12	0	0	0	0	multi-exon	FALSE	canonical	3	2595	junction_10	148.402624110813	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTGTTTCCTGCACG	61814096	True	NA	21	True	AATAAA	-20	NA	61828299	61867354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706_61863787_61865151_61865278_61865637
transcript_24259.known	chr11	-	1725	12	FSM	ENSG00000149485.19	ENST00000542506.5	1725	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_11	270.832997244971	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGGGTTGGGTTTGGGGA	-61815226	False	NA	-44	True	NA	NA	NA	61815291	61802312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61814795
transcript_24262.known	chr11	-	4364	12	FSM	ENSG00000149485.19	ENST00000350997.12	4364	12	0	0	0	0	multi-exon	TRUE	canonical	3	872	junction_5	37.8952449098414	890	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTCATTTGTAACCCATG	-61814828	True	NA	-17	True	AATAAA	-18	NA	61817003	61799626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61802463_61802800_61802927_61803031_61803112_61803362_61803460_61803669_61803768_61804684_61804762_61806663_61806725_61810750_61810880_61810973_61811076_61812470_61812669_61813242_61813354_61816554
transcript_24273.known	chr11	+	1703	10	FSM	ENSG00000134824.14	ENST00000521849.5	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	2625	junction_7	146.460461103557	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACAGAGTCTCACCCTGT	61814076	True	NA	57	True	AATAAA	-8	NA	61828279	61864221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61857010_61857072_61857453_61857531_61862971_61863070_61863281_61863379_61863706
transcript_2428.known	chr1	+	583	5	FSM	ENSG00000173436.15	ENST00000467029.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	2292.63025802243	2247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGAAGTCCATTGCATGGC	19555454	True	NA	7	True	AATAAA	-12	NA	19597000	19626623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19617257_19617337_19622099_19622148_19623473_19623584_19626386
transcript_24283.nnic	chr11	+	1465	6	NIC	ENSG00000134824.14	novel	1703	10	NA	NA	-198	259	intron_retention	FALSE	canonical	3	26	junction_5	1128.41315128813	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTACCTTGTATCCTGCAA	61827963	False	NA	NA	False	AATAAA	-20	NA	61827980	61850059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_61828598_61837777_61837889_61840333_61840532_61840623_61840726_61848158_61848285_61849748
transcript_24289.nic	chr11	+	1512	3	NIC	ENSG00000168496.4	novel	768	2	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	84	junction_2	454.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAACCAAAATGTCATGT	61786071	True	NA	18	True	AATAAA	-8	NA	61792883	61797232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_61793029_61795340_61796397_61796921
transcript_24292.known	chr11	+	2016	2	FSM	ENSG00000168496.4	ENST00000305885.3	2016	2	0	0	0	0	multi-exon	FALSE	canonical	3	993	junction_1	0	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAAATGTCATGTTCTTTG	61786098	True	NA	24	True	AATAAA	-14	NA	61792910	61797238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61793029_61795340
transcript_24293.known	chr11	+	776	2	FSM	ENSG00000168496.4	ENST00000535723.1	776	2	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTGAAGGCTGGCAAAGT	61786138	True	NA	NA	False	NA	NA	NA	61792950	61795856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61793211_61795340
transcript_24295.known	chr11	+	360	3	FSM	ENSG00000134824.14	ENST00000522639.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	6	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATTTCTGAGAAAATAAT	61811475	False	NA	9	True	ATTAAA	-22	NA	61816402	61826512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61816427_61826031_61826138_61826282
transcript_24296.known	chr11	-	1790	12	FSM	ENSG00000221968.9	ENST00000278829.7	1790	12	0	0	0	0	multi-exon	TRUE	canonical	3	309	junction_4	52.7822597294655	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	-61891479	False	NA	-11	True	ATTAAA	-16	NA	61891545	61873525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891168
transcript_24297.nic	chr11	-	1764	12	NIC	ENSG00000221968.9	novel	1790	12	NA	NA	-158	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_11	125.635376920214	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTGGAGTGGTGAA	NA	False	NA	-11	True	ATTAAA	-16	NA	61892209	61873525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_61873866_61875850_61875977_61876110_61876191_61876358_61876456_61876865_61876964_61877510_61877588_61878154_61878216_61878511_61878635_61878745_61878848_61879311_61879510_61880040_61880152_61891858
transcript_24305.known	chr11	-	1203	4	FSM	ENSG00000167996.16	ENST00000273550.12	1203	4	0	0	0	0	multi-exon	FALSE	canonical	3	14373	junction_2	587.209408038469	1000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTCTGGGATTTTTATCT	-61826342	True	NA	NA	False	AATAAA	-18	NA	61967634	61964284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311
transcript_24306.nnic	chr11	-	850	5	NNC	ENSG00000167996.16	novel	825	5	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6558.81365034867	875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826348	True	NA	-39	True	AATAAA	-15	NA	61967640	61964565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967449_61967526
transcript_24307.nnic	chr11	-	856	5	NNC	ENSG00000167996.16	novel	825	5	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	6558.81365034867	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826340	True	NA	-39	True	AATAAA	-15	NA	61967632	61964565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967452_61967515
transcript_24308.known	chr11	-	825	5	FSM	ENSG00000167996.16	ENST00000620041.4	825	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	6558.81365034867	927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61964892_61964986_61965113_61965368_61965516_61967311_61967454_61967547
transcript_24309.known	chr11	-	912	4	FSM	ENSG00000167996.16	ENST00000532829.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	134	junction_2	7232.84181125695	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGTTGTCTTTGAGGTCT	-61826339	True	NA	-39	True	AATAAA	-15	NA	61967631	61964565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_61964892_61964986_61965106_61965368_61965516_61967311
transcript_24310.known	chr11	+	1697	1	FSM	ENSG00000279491.1	ENST00000623785.1	1697	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	61967658	True	NA	NA	False	AAAACA	-13	NA	61967793	61969490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_61967800_61969500
transcript_24312.known	chr11	+	455	3	FSM	ENSG00000124935.4	ENST00000244926.4	455	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACTGGTCTTGTTATAAT	NA	False	NA	NA	False	AATAAA	-19	NA	62242238	62244812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62242363_62243288_62243477_62244669
transcript_24313.known	chr11	+	520	3	FSM	ENSG00000124939.6	ENST00000244930.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTTGTTCTTCTATA	NA	False	NA	NA	False	AATAAA	-21	NA	62208672	62213943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62208787_62210412_62210601_62213725
transcript_24319.known	chr11	+	2182	7	FSM	ENSG00000162174.12	ENST00000301776.9	2182	7	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	95.7717193237243	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAATAAGGGTGTGGTTG	62333128	True	NA	NA	False	AATAAA	-11	NA	62337452	62393406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_2432.known	chr1	+	657	5	FSM	ENSG00000173436.15	ENST00000481464.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2346.33863711102	2082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCATTGCATGGCCTTTGT	19555492	True	NA	13	True	AATAAA	-18	NA	19597038	19626629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19600786_19600972_19622099_19622148_19623473_19623584_19626386
transcript_24331.known	chr11	+	1161	6	FSM	ENSG00000162174.12	ENST00000628829.2	1161	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	99.0042423333465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	62333168	True	NA	NA	False	NA	NA	NA	62337492	62392568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337966_62338168_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_24339.known	chr11	+	639	4	FSM	ENSG00000162174.12	ENST00000534571.5	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_1	26.4196896272458	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATACCTGGTTATCTACAG	62333170	True	NA	12	True	ATTAAA	-16	NA	62337494	62357201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337966_62338168_62356324_62356468_62356986
transcript_24340.known	chr11	+	535	4	FSM	ENSG00000162174.12	ENST00000526096.2	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	184.591440754982	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTGTCAAAAGTAAGTCT	62333178	True	NA	-57	True	AAAAAG	-42	NA	62337502	62357132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337993_62338168_62356324_62356468_62356986
transcript_24341.nic	chr11	+	570	3	ISM	ENSG00000162174.12	ENST00000534183.5	1177	4	-27	32622	-24	3	5prime_fragment	FALSE	canonical	3	44	junction_2	156	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGGTTATCTACAGTTC	62333099	True	NA	15	True	ATTAAA	-19	NA	62337423	62357204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_62337575_62337966_62338168_62356986
transcript_24347.known	chr11	+	2270	7	FSM	ENSG00000162174.12	ENST00000415229.6	2270	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	120.577314984573	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGGTGTGGTTGGGAGTC	62333123	True	NA	NA	False	AATAAA	-17	NA	62337447	62393412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62337575_62337889_62338168_62356324_62356468_62356986_62357145_62389132_62389252_62391521_62391633_62392078
transcript_24348.known	chr11	+	642	2	FSM	ENSG00000162174.12	ENST00000525708.1	642	2	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGGGAAAAAAGAAAGA	NA	False	NA	NA	False	NA	NA	NA	62391497	62392585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62391633_62392078
transcript_24349.known	chr11	-	1024	6	FSM	ENSG00000124942.14	ENST00000257247.11	1024	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.49666295470958	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGTGTCAACCTT	-62546270	False	NA	-4	True	AATAAA	-14	NA	62546796	62433545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62433892_62491731_62491832_62535002_62535191_62535944_62536099_62536468_62536568_62546659
transcript_24350.nnic	chr11	-	583	3	NNC	ENSG00000124942.14	novel	1024	6	NA	NA	12059	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCTTGTGTCAACCTT	NA	False	NA	-4	True	AATAAA	-14	NA	62505298	62433545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_62433892_62491731_62491832_62505161
transcript_24382.known	chr11	-	2705	9	FSM	ENSG00000149016.16	ENST00000476907.6	2705	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	35.2907565801585	152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACAGTCTCCCGTTTCCTTT	-62589381	True	NA	NA	False	AATAAA	-17	NA	62591523	62575051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62576245_62576656_62576750_62576906_62577018_62577181_62577292_62578560_62579031_62581105_62581207_62581385_62581702_62589030_62589222_62591403
transcript_24396.known	chr11	-	1446	10	FSM	ENSG00000254772.10	ENST00000329251.5	1446	10	0	0	0	0	multi-exon	FALSE	canonical	3	6531	junction_9	1547.36527166362	77783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGTCCTGCCTCCTTTGT	-62416091	True	NA	-11	True	ATTAAA	-23	NA	62573891	62559595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62559838_62560068_62560194_62560281_62560455_62566805_62567011_62567398_62567529_62570964_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573830
transcript_24397.known	chr11	-	578	5	FSM	ENSG00000254772.10	ENST00000532986.1	578	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	4485.85579209809	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTTGTCTGCACCCTGT	NA	False	NA	NA	False	NA	NA	NA	62574086	62571001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62571109_62571539_62571683_62571837_62571902_62572583_62572743_62573981
transcript_24401.known	chr11	+	862	3	FSM	ENSG00000149489.9	ENST00000534093.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTTTGGATGGAAGCAA	62611749	True	NA	-7	True	NA	NA	NA	62611785	62615100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62611921_62614257_62614505_62614620
transcript_24402.nic	chr11	+	1065	3	NIC	ENSG00000149489.9	novel	862	3	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	1	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	62611733	True	NA	9	True	AATAAA	-15	NA	62611769	62615116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_62612092_62614257_62614505_62614620
transcript_24403.known	chr11	+	1358	3	FSM	ENSG00000149489.9	ENST00000278833.4	1358	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGCTTTTTCTTGTCA	62613246	False	NA	9	True	AATAAA	-15	NA	62613256	62615116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62613872_62614257_62614505_62614620
transcript_24410.known	chr11	-	1452	5	FSM	ENSG00000149541.10	ENST00000265471.10	1452	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_4	47.4341649025257	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGGCCTCTTGTTTTCCTTT	-62619927	True	NA	-27	True	AATAAA	-16	NA	62621986	62615295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62615800_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_24413.known	chr11	-	1120	5	FSM	ENSG00000149541.10	ENST00000534026.5	1120	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	76.4852927038918	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCACGGTGTTAGCCAGGA	-62619925	True	NA	NA	False	NA	NA	NA	62621984	62616066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62616241_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_24416.known	chr11	-	2056	5	FSM	ENSG00000149541.10	ENST00000531383.5	2056	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	76.4852927038918	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGGGCCTCTTGTTTTCCTT	-62622141	False	34	-28	True	AATAAA	-15	NA	62622154	62615296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62616237_62616505_62616797_62616986_62617348_62620496_62620672_62621865
transcript_24419.known	chr11	-	3906	25	FSM	ENSG00000089597.18	ENST00000346178.8	3906	25	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	367.263784628978	2655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGGTAGTCTGGATTCT	-62629165	True	NA	72	True	AATAAA	-19	NA	62646615	62624825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634309_62634376_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_24421.known	chr11	-	3835	24	FSM	ENSG00000089597.18	ENST00000356638.8	3835	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	282.204748097496	2658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGGTGGTAGTCTGGAT	-62629163	True	NA	69	True	AATAAA	-16	NA	62646613	62624828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639358_62639468_62639626_62639732_62646561
transcript_24424.known	chr11	-	3836	23	FSM	ENSG00000089597.18	ENST00000540933.5	3836	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	357.64692409421	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATAACTGGTGGTAGTCTG	-62645637	False	NA	66	True	AATAAA	-13	NA	62646726	62624831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62625925_62626064_62626166_62626334_62626448_62626570_62626685_62626859_62626935_62627047_62627125_62627288_62627354_62628768_62629013_62629193_62629296_62629587_62629685_62629813_62629958_62630196_62630277_62630378_62630506_62630600_62630837_62631029_62631184_62632564_62632746_62633004_62633102_62633183_62633272_62633444_62633515_62634820_62635001_62638982_62639111_62639626_62639732_62646561
transcript_24433.known	chr11	-	1320	7	FSM	ENSG00000162194.13	ENST00000354588.8	1818	7	498	0	-4	0	multi-exon	TRUE	canonical	2	3	junction_6	1332.83432328753	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62655747	False	NA	-1	True	AATAAA	-16	NA	62671769	62662816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62667522_62667748_62669640_62669804_62669881_62670042_62671563
transcript_24437.known	chr11	+	1368	3	FSM	ENSG00000214756.8	ENST00000398922.6	1368	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.5	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCTAGTGGCCTAACCT	62665243	False	NA	NA	False	NA	NA	NA	62665308	62667397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665333_62665646_62665947_62666353
transcript_24438.known	chr11	+	2034	3	FSM	ENSG00000214756.8	ENST00000532971.2	2034	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	110	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGCAGCCTCAATTTTCT	62659955	True	NA	11	True	TATAAA	-33	NA	62665311	62668108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665333_62665646_62665947_62666395
transcript_24442.known	chr11	+	2870	2	FSM	ENSG00000214756.8	ENST00000529868.1	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTAGCTTCTGTAAC	62659956	True	NA	NA	False	NA	NA	NA	62665312	62668496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665333_62665646
transcript_24444.known	chr11	+	376	1	FSM	ENSG00000214756.8	ENST00000594728.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1231	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCGCGTTCTTTT	62659979	False	NA	21	True	AATAAA	-17	NA	62665335	62665711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665300_62665700
transcript_24445.known	chr11	+	149	1	FSM	ENSG00000206597.1	ENST00000383870.1	149	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATCTCGGAGAAGGACAA	62660065	False	NA	0	True	NA	NA	NA	62665421	62665570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62665400_62665600
transcript_24446.known	chr11	-	646	4	FSM	ENSG00000278615.5	ENST00000524958.6	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_3	175.689751803823	23902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628992	True	NA	-1	True	AATAAA	-16	NA	62665210	62662816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848_62664974_62665130
transcript_24447.known	chr11	-	774	3	FSM	ENSG00000278615.5	ENST00000532786.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	2792	junction_2	47.5	2496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGTGTGATTAAATGTA	-62628963	True	NA	-1	True	AATAAA	-16	NA	62665181	62662816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663160_62663235_62663334_62664848
transcript_24448.known	chr11	-	405	3	FSM	ENSG00000278615.5	ENST00000525675.1	405	3	0	0	0	0	multi-exon	FALSE	canonical	3	2476	junction_2	158	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAGGCAAAAGAAGACAAAA	-62628973	True	NA	NA	False	NA	NA	NA	62665191	62663114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62663334_62664848_62664974_62665130
transcript_24449.known	chr11	+	1927	2	FSM	ENSG00000204922.5	ENST00000377953.4	1927	2	0	0	0	0	multi-exon	FALSE	canonical	3	914	junction_1	0	5352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAATTTCTGTGTTGTT	62660296	True	NA	NA	False	AATAAA	-20	NA	62671672	62673686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62671866_62671952
transcript_24453.known	chr11	-	943	10	FSM	ENSG00000162191.14	ENST00000534176.1	943	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	292.109948858683	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCCAAGAAATGTCCCAGC	-62663059	True	NA	-115	True	NA	NA	NA	62679081	62676612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864_62678953_62679038
transcript_24465.known	chr11	-	1257	8	FSM	ENSG00000162191.14	ENST00000525717.5	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_4	73.404387345939	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCCTGAGTTCTGTACAT	-62663045	True	NA	-19	True	AATAAA	-2	NA	62679067	62676516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_24466.known	chr11	-	367	4	FSM	ENSG00000162191.14	ENST00000533000.5	367	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	462.736065880613	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	-62661961	False	NA	-1	True	AATAAA	-20	NA	62677983	62676498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62677517_62677635_62677780_62677833_62677926
transcript_24467.known	chr11	-	1002	7	FSM	ENSG00000162191.14	ENST00000616865.4	1002	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	368.778012118703	3025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTGACTCCTTCCTGAA	NA	False	NA	-1	True	AATAAA	-20	NA	62679117	62676498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678689_62678744_62678864
transcript_24468.known	chr11	-	1110	9	FSM	ENSG00000162191.14	ENST00000529640.5	1110	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	327.24150103555	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACATGCCTGACTCCTTC	-62663043	True	NA	-6	True	AATAAA	-15	NA	62679065	62676503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677006_62677517_62677635_62677780_62677833_62677938_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_24469.known	chr11	-	2073	5	FSM	ENSG00000162191.14	ENST00000532904.5	2073	5	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_2	81.6945530620004	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	-62663036	True	NA	0	True	AATAAA	-21	NA	62679058	62676497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_24470.known	chr11	-	1291	8	FSM	ENSG00000162191.14	ENST00000294119.6	1291	8	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_4	68.6416307308309	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGACTCCTTCCTGAAT	-62663033	True	NA	0	True	AATAAA	-21	NA	62679055	62676497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62677006_62677517_62677635_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_24471.known	chr11	-	1912	6	FSM	ENSG00000162191.14	ENST00000533476.5	1912	6	0	0	0	0	multi-exon	FALSE	canonical	3	887	junction_3	77.5577204409722	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGCCTGACTCCTTCCTG	-62663051	True	NA	-3	True	AATAAA	-18	NA	62679073	62676500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62676640_62676812_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689
transcript_24472.known	chr11	-	763	8	FSM	ENSG00000162191.14	ENST00000524762.5	763	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	340.110906281214	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCCAGACGTTCCGGGCCC	-62663058	True	NA	NA	False	NA	NA	NA	62679080	62676979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62677006_62677517_62677564_62677780_62677833_62677926_62678119_62678338_62678409_62678494_62678602_62678689_62678744_62678864
transcript_24475.known	chr11	-	2001	12	FSM	ENSG00000168000.16	ENST00000679883.1	2001	12	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_11	150.64050578603	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62709405	True	NA	-37	True	AATAAA	-19	NA	62709537	62690274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709146
transcript_24483.known	chr11	-	2777	11	FSM	ENSG00000168000.16	ENST00000682555.1	2777	11	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_7	158.902359957302	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-62707575	False	NA	NA	False	NA	NA	NA	62707587	62689288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692716_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_24485.known	chr11	-	1693	11	FSM	ENSG00000168000.16	ENST00000403550.5	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_10	139.100287562607	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62706222	False	NA	-57	True	NA	NA	NA	62706234	62690294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62705915
transcript_24487.known	chr11	-	1516	11	FSM	ENSG00000168000.16	ENST00000407022.7	1516	11	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_10	99.7569546447765	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62706332	False	NA	-57	True	NA	NA	NA	62706344	62690294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_24488.known	chr11	-	1793	11	FSM	ENSG00000168000.16	ENST00000682223.1	1793	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	153.657280985966	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGCACTTTCCCACCT	-62707575	False	NA	-107	True	AAGAAA	-18	NA	62707587	62690344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690621_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_24498.known	chr11	-	1882	11	FSM	ENSG00000168000.16	ENST00000683296.1	1882	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	151.848773455698	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62707575	False	NA	-37	True	AATAAA	-19	NA	62707587	62690274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690732_62690816_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_245.known	SIRV3	-	796	3	FSM	SIRV3C	SIRV309	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1533	junction_2	30	2149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCTCAAATATCTGTGTC	NA	False	NA	NA	False	CATAAA	-21	NA	9943	8797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_8976_9189_9299_9434
transcript_2450.known	chr1	+	3678	3	FSM	ENSG00000173436.15	ENST00000617872.4	3678	3	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	2194.5	2288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGACTCCATGGCGCTT	19555430	True	NA	17	True	AATAAA	-23	NA	19596976	19629821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19623473_19623584_19626386
transcript_24505.known	chr11	-	2381	10	FSM	ENSG00000168000.16	ENST00000449636.6	2381	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	153.200747830428	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-62704341	True	NA	NA	False	NA	NA	NA	62707426	62689288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62707108
transcript_24513.known	chr11	-	2724	10	FSM	ENSG00000168000.16	ENST00000684475.1	2724	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	167.00099800101	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTGCTTACAATATTTC	-62707575	False	NA	NA	False	NA	NA	NA	62707587	62689288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_24518.known	chr11	-	1364	10	FSM	ENSG00000168000.16	ENST00000278893.11	1364	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	152.841077795625	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	-62706303	False	NA	-38	True	AATAAA	-18	NA	62706315	62690275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706202
transcript_24519.nic	chr11	-	1731	10	NIC	ENSG00000168000.16	novel	1710	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	71	junction_4	148.492507189279	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGACTCTGAAATGGG	-62707575	False	NA	-37	True	AATAAA	-19	NA	62707587	62690274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108
transcript_2455.known	chr1	+	438	5	FSM	ENSG00000173436.15	ENST00000485362.1	438	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2335.18033297217	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AATAAATTAAACAAAAAGAG	19555523	True	NA	-10	True	NA	NA	NA	19597069	19626606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19597833_19597854_19622099_19622148_19623473_19623584_19626386
transcript_24556.known	chr11	-	1440	11	FSM	ENSG00000168000.16	ENST00000421906.5	1440	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	139.944131709765	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTTTTTCCTTCAATA	-62706332	False	NA	-77	True	NA	NA	NA	62706344	62690314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62706258
transcript_24557.known	chr11	-	512	4	FSM	ENSG00000168000.16	ENST00000470529.5	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	35.6121078036982	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCCTTGACTCTGAAATGG	NA	False	NA	-38	True	AATAAA	-18	NA	62691178	62690275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074
transcript_24558.known	chr11	-	1863	12	FSM	ENSG00000168000.16	ENST00000524862.6	1863	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	153.454330030008	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTATTTTGTGTCAGCTTC	-62709404	True	NA	-57	True	NA	NA	NA	62709536	62690294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62690522_62690611_62690693_62690786_62690868_62691074_62691142_62691279_62691422_62692375_62692474_62692662_62692798_62694567_62694712_62702467_62702550_62705300_62705618_62707108_62707325_62709263
transcript_24559.known	chr11	+	864	3	FSM	ENSG00000162188.6	ENST00000294117.6	864	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	5	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAGCTCCTGTGTTAGAA	62707224	True	NA	4	True	AATAAA	-17	NA	62707675	62709201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62707916_62708294_62708395_62708677
transcript_2456.known	chr1	+	481	2	FSM	ENSG00000173436.15	ENST00000498067.1	481	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACAGTCAAGTGATTTG	19555444	True	NA	NA	False	AATAAA	-42	NA	19596990	19598195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19597833
transcript_24560.known	chr11	-	5214	14	FSM	ENSG00000214753.4	ENST00000301785.7	5214	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.1287568820824	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTATCTCCTGTGGCTGCA	-62721169	True	NA	-4	True	AATAAA	-22	NA	62727457	62712629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62715380_62715499_62715608_62715863_62715938_62716988_62717190_62720022_62720192_62721294_62721424_62721819_62721943_62722116_62722381_62722600_62722714_62722812_62722904_62723586_62723727_62723913_62723991_62724290_62724427_62726618
transcript_2457.known	chr1	+	669	5	FSM	ENSG00000173436.15	ENST00000498642.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	2417.37671609123	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTAAGGAGGTGGTCTTAA	19555494	True	NA	-29	True	NA	NA	NA	19597040	19626587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19622099_19622148_19623473_19623584_19625391_19625633_19626386
transcript_2458.known	chr1	+	1623	4	FSM	ENSG00000158747.15	ENST00000602662.1	1623	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	35.3930313291567	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTTCCAGAGGCCCTAGG	19555432	True	NA	NA	False	NA	NA	NA	19596978	19658056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19597110_19655011_19655201_19655323_19655436_19656865
transcript_24586.nic	chr11	+	960	4	NIC	ENSG00000162222.14	novel	1133	3	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	68.9975844987828	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62728050	True	NA	21	True	AATATA	-14	NA	62728063	62738636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_62728228_62728822_62729087_62735381_62735565_62738287
transcript_24589.known	chr11	+	1833	4	FSM	ENSG00000162222.14	ENST00000294161.10	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	13.5236418500672	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTTGTTTTTTGGGGCT	62727555	True	NA	NA	False	NA	NA	NA	62728111	62736243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62728737_62728822_62729087_62733117_62733200_62735381
transcript_2459.nic	chr1	+	251	3	ISM	ENSG00000173436.15	ENST00000498642.5	669	5	-23	3003	17	33	5prime_fragment	FALSE	canonical	3	4808	junction_2	35	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTACAGAATATATATTT	19555471	True	NA	NA	False	NA	NA	NA	19597017	19623584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_19597110_19622099_19622148_19623473
transcript_24590.known	chr11	+	858	4	FSM	ENSG00000162222.14	ENST00000532583.1	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	62.0232931154811	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGCTTGAGAAATATA	62726482	False	NA	-12	True	AATACA	-16	NA	62728641	62738603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62728737_62728822_62729087_62735381_62735565_62738287
transcript_24597.known	chr11	+	606	3	FSM	ENSG00000162222.14	ENST00000530625.5	606	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	53	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGCAAGAAGGGCTTTGA	62728055	False	NA	NA	False	NA	NA	NA	62728068	62735564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62728228_62728822_62729087_62735381
transcript_24599.known	chr11	+	1133	3	FSM	ENSG00000162222.14	ENST00000316461.9	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	30.5	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAGTTGTGGGTGGAATT	62726326	True	NA	21	True	AATATA	-14	NA	62728485	62738636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62729087_62735381_62735565_62738287
transcript_246.known	SIRV3	-	589	3	FSM	SIRV3C	SIRV310	589	3	0	0	0	0	multi-exon	FALSE	canonical	3	1420	junction_2	31.5	11571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTGGTTTTGGGTACT	NA	False	NA	NA	False	NA	NA	NA	9914	8759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_8967_9189_9325_9667
transcript_2460.known	chr1	+	455	1	FSM	ENSG00000226396.1	ENST00000457263.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1062	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAGATTCCTCAAAATATT	19608049	False	NA	-59	True	NA	NA	NA	19608113	19608568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_19608100_19608600
transcript_24602.known	chr11	+	346	1	FSM	ENSG00000162222.14	ENST00000601045.1	346	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAGTATTTATTTAATAA	NA	False	NA	NA	False	ATTAAA	-28	NA	62739947	62740293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62739900_62740300
transcript_24603.known	chr11	-	2972	2	FSM	ENSG00000185670.9	ENST00000673933.1	2972	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGGTGTTGGCTGGTTTC	-62754159	False	NA	-7	True	CATAAA	-25	NA	62754184	62750964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62753716_62753963
transcript_24619.known	chr11	+	791	8	FSM	ENSG00000168002.12	ENST00000301788.12	791	8	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_2	75.6339196122901	11445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750075	True	NA	15	True	TATAAA	-17	NA	62761579	62766710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_24620.known	chr11	+	919	8	FSM	ENSG00000168002.12	ENST00000525455.5	919	8	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	439.576326635973	1710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGTGTTCTAAGTATAA	62750075	True	NA	-22	True	NA	NA	NA	62761579	62766673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62761905_62762541_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_24621.known	chr11	+	1556	7	FSM	ENSG00000168002.12	ENST00000531944.5	1556	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	342.071832937015	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750112	True	NA	15	True	TATAAA	-17	NA	62761616	62766710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62762867_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_24622.known	chr11	+	1053	8	FSM	ENSG00000168002.12	ENST00000524819.5	1053	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	397.307622553074	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTTGGTTCTCATGGAA	62750078	True	NA	0	True	TATAAA	-2	NA	62761582	62766695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761661_62761794_62762185_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_24623.known	chr11	+	868	7	FSM	ENSG00000168002.12	ENST00000527435.5	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	81.6938730192717	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTGTTATCTTCTTTT	62750132	True	NA	15	True	TATAAA	-17	NA	62761636	62766710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62761905_62762866_62763027_62765181_62765233_62765339_62765406_62765652_62765725_62766242_62766277_62766493
transcript_24626.nnic	chr11	+	835	5	NNC	ENSG00000185475.11	novel	1043	5	NA	NA	-49	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	149.56102433455	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783309	True	NA	26	True	NA	NA	NA	62787352	62790246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_62787528_62789125_62789211_62789291_62789427_62789600_62789680_62789885
transcript_2464.known	chr1	-	813	5	FSM	ENSG00000188257.12	ENST00000649436.1	813	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.82623792124926	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	-19979491	True	NA	1	True	AATAAA	-20	NA	19979621	19975430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978485_19978733_19978880_19979579
transcript_24640.known	chr11	+	839	4	FSM	ENSG00000185475.11	ENST00000532586.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	175.777005195661	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATAATGACAGGCCCCC	62783371	True	NA	-53	True	NA	NA	NA	62787414	62790167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62787528_62789186_62789211_62789291_62789427_62789600
transcript_24646.known	chr11	-	563	4	FSM	ENSG00000168569.8	ENST00000527073.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGTCAGGGGTCACTGA	-62791677	False	NA	NA	False	NA	NA	NA	62791743	62771628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62772000_62772076_62772133_62774594_62774666_62791678
transcript_2465.known	chr1	-	608	5	FSM	ENSG00000188257.12	ENST00000482011.2	608	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.27760839478607	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGCTGAATTTCCCTCTC	-19979488	True	NA	NA	False	NA	NA	NA	19979618	19975672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978880_19979579
transcript_24652.known	chr11	-	487	1	FSM	ENSG00000267811.1	ENST00000596071.1	487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTTGATTTTCTTTGTC	NA	False	NA	1	True	AATAAA	-15	NA	62771606	62771119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62771100_62771600
transcript_24653.known	chr11	+	1043	5	FSM	ENSG00000185475.11	ENST00000333449.9	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_3	14.9227175809234	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGTTGTTACTCCATTC	62783358	True	NA	39	True	AATGAA	-20	NA	62787401	62790400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789600_62789680_62789885
transcript_24654.known	chr11	+	797	4	FSM	ENSG00000185475.11	ENST00000533861.5	797	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	170.411919249277	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGTGAGTTTTTGATGTTA	62783371	True	NA	26	True	NA	NA	NA	62787414	62790246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62787528_62789022_62789211_62789291_62789427_62789885
transcript_24657.known	chr11	-	2290	21	FSM	ENSG00000162231.14	ENST00000294172.7	2290	21	0	0	0	0	multi-exon	TRUE	canonical	3	150	junction_11	17.2669481959031	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTTCTGCGTGCTGG	-62804046	True	NA	-12	True	TATAAA	-14	NA	62805440	62792129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62792515_62792640_62792702_62794257_62794441_62794934_62795008_62795900_62795944_62796065_62796182_62796286_62796346_62796459_62796568_62797182_62797239_62797317_62797387_62798538_62798576_62800376_62800487_62801093_62801202_62801328_62801418_62801561_62801632_62801738_62801820_62801941_62802047_62802176_62802261_62803418_62803573_62803791_62803979_62805328
transcript_24664.known	chr11	-	1785	11	FSM	ENSG00000162236.13	ENST00000377897.8	1785	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56.8542874372725	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCCATGTCATCATTTCT	-62832025	False	10760	-2	True	NA	NA	NA	62832041	62806896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807667_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_24667.known	chr11	-	1568	11	FSM	ENSG00000162236.13	ENST00000394690.5	1568	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	55.3584681868998	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTACAGCAAGACTGT	-62832026	False	10760	-30	True	NA	NA	NA	62832042	62806924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825035_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831111_62831953
transcript_24670.known	chr11	-	1719	11	FSM	ENSG00000162236.13	ENST00000491231.5	1719	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	56.5406048782643	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCGTTTTCTCCCAATTA	-62832026	False	10760	-42	True	NA	NA	NA	62832042	62806936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62807629_62824165_62824288_62824458_62824566_62825024_62825118_62825282_62825340_62825422_62825540_62827154_62827226_62827342_62827399_62827560_62827632_62831018_62831263_62831953
transcript_2468.nnic	chr1	-	772	4	NIC	ENSG00000188257.12	novel	970	6	NA	NA	-71	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	8.9938250421547	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTATATGTGTGTGTGT	NA	False	NA	-6	True	AATAAA	-13	NA	19979692	19975437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_19975844_19978014_19978122_19978733_19978880_19979579
transcript_24681.known	chr11	-	1366	12	FSM	ENSG00000133316.16	ENST00000529106.5	1366	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	170.866242210896	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGACCCTGAGCCTTTT	-62840140	False	NA	-6	True	AATAAA	-14	NA	62840156	62832911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506_62839660_62840077
transcript_24689.known	chr11	-	191	1	FSM	ENSG00000222328.1	ENST00000410396.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCGGGGAGAGAACAACCG	NA	False	NA	NA	False	NA	NA	NA	62841809	62841618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62841600_62841800
transcript_2469.known	chr1	-	871	5	FSM	ENSG00000188257.12	ENST00000400520.8	871	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.98044484975618	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGTGTGTATGCATT	-19979477	False	NA	1	True	AATAAA	-20	NA	19979607	19975430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_19975844_19978014_19978122_19978379_19978525_19978733_19978912_19979579
transcript_24690.known	chr11	-	1219	11	FSM	ENSG00000133316.16	ENST00000278856.9	1219	11	0	0	0	0	multi-exon	FALSE	canonical	3	564	junction_6	27.343006418461	3014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828830	True	NA	-5	True	AATAAA	-15	NA	62839590	62832910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833132_62833617_62833675_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_24691.known	chr11	-	1153	10	FSM	ENSG00000133316.16	ENST00000311713.11	1153	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	175.56476769079	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACCCTGAGCCTTTTG	-62828821	True	NA	-5	True	AATAAA	-15	NA	62839581	62832910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62833132_62833791_62833938_62834275_62834332_62834426_62834528_62835430_62835533_62835694_62835842_62835960_62836037_62839113_62839236_62839321_62839429_62839506
transcript_24700.known	chr11	-	1394	11	FSM	ENSG00000255717.8	ENST00000540725.6	1394	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	70.7675066679617	1305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855746_62855864
transcript_24709.known	chr11	-	780	9	FSM	ENSG00000255717.8	ENST00000542112.5	780	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	98.2534191517018	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCGTAAACTACTGACCT	NA	False	NA	NA	False	NA	NA	NA	62855914	62852257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62855132_62855217_62855864
transcript_24717.known	chr11	-	1158	1	FSM	ENSG00000255717.8	ENST00000668048.1	1158	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	547	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62844043	False	NA	-48	True	AATAAA	-16	NA	62853145	62851987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852000_62853100
transcript_24718.known	chr11	-	1117	11	FSM	ENSG00000255717.8	ENST00000689147.1	1162	11	36	9	0	0	multi-exon	FALSE	canonical	3	88	junction_10	48.1257727210691	3429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTTTACTTTTTTTGTG	-62846784	True	NA	-47	True	AATAAA	-17	NA	62855886	62851986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24719.known	chr11	-	1689	9	FSM	ENSG00000255717.8	ENST00000544550.6	1689	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_8	28.5263036511918	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTACATAGTCCTGTTT	-62846735	True	NA	-59	True	AATAAA	-5	NA	62855837	62851998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24720.known	chr11	-	897	11	FSM	ENSG00000255717.8	ENST00000541578.6	897	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	63.3404294270255	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846386	False	NA	-48	True	AATAAA	-16	NA	62855488	62851987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852437_62852655_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24721.known	chr11	-	1513	10	FSM	ENSG00000255717.8	ENST00000658540.1	1513	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	28.1547750483766	1173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTTTACTTTTTTTGT	-62846783	True	NA	-48	True	AATAAA	-16	NA	62855885	62851987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24722.known	chr11	-	1785	9	FSM	ENSG00000255717.8	ENST00000660547.1	1785	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	50.1346624103524	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	-62846784	True	NA	-50	True	AATAAA	-14	NA	62855886	62851989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853591_62853800_62853834_62854017_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24723.known	chr11	-	1438	10	FSM	ENSG00000255717.8	ENST00000653690.1	1438	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	50.6866432353646	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	-62846783	True	NA	-61	True	AATAAA	-3	NA	62855885	62852000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62854518_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24724.known	chr11	-	1038	9	ISM	ENSG00000255717.8	ENST00000537869.6	1069	10	425	4	0	0	3prime_fragment	FALSE	canonical	3	36	junction_5	68.5865101532364	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTCCTGTTTACTTTTTT	-62846358	False	NA	-51	True	AATAAA	-13	NA	62855460	62851990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24725.known	chr11	-	955	7	FSM	ENSG00000255717.8	ENST00000539975.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	91.508499908782	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTGATGAAAATAATAAAATG	-62846134	False	NA	-80	True	NA	NA	NA	62855236	62852019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62853834_62854017_62854065_62855132
transcript_24726.known	chr11	-	2309	7	FSM	ENSG00000255717.8	ENST00000662229.1	2309	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_6	31.2569992161756	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTACATAGTCCTGTTT	-62846735	True	NA	-59	True	AATAAA	-5	NA	62855837	62851998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853591_62853800_62854065_62854518_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24727.known	chr11	-	1782	9	FSM	ENSG00000255717.8	ENST00000667655.1	1782	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	53.4460884911141	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGATTACATAGTCCTGT	NA	False	NA	-61	True	AATAAA	-3	NA	62855927	62852000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62852840_62853074_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423_62855467_62855864
transcript_24728.known	chr11	-	2336	7	FSM	ENSG00000255717.8	ENST00000661616.1	2336	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_6	31.8119474411737	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTCCTGTTTACTTTTTTT	-62846735	True	NA	-50	True	AATAAA	-14	NA	62855837	62851989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_62852682_62852810_62853116_62853551_62853591_62853800_62854552_62854887_62854939_62855132_62855217_62855423
transcript_24730.known	chr11	+	2334	13	FSM	ENSG00000168003.18	ENST00000538084.2	2334	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	773.674332146429	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841890	True	NA	46	True	AATAAA	-41	NA	62856108	62888880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62876786_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24731.known	chr11	+	2222	12	FSM	ENSG00000168003.18	ENST00000377891.6	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_2	762.208166616049	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	62841892	True	NA	26	True	AATAAA	-21	NA	62856110	62888860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62871576_62871670_62876783_62876880_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24733.known	chr11	+	2197	12	FSM	ENSG00000168003.18	ENST00000680725.1	2197	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	716.324179808634	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841892	True	NA	46	True	AATAAA	-41	NA	62856110	62888880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62870744_62870796_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24735.known	chr11	+	2161	12	FSM	ENSG00000168003.18	ENST00000377890.6	2161	12	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	621.516487151912	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTATGAGTGAACCCCCAA	62841883	True	NA	16	True	TTTAAA	-23	NA	62856101	62888793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62870744_62870838_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24737.known	chr11	+	2084	11	FSM	ENSG00000168003.18	ENST00000535296.5	2084	11	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	573.772263184619	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCATAGCAGGAATTTCT	62841949	True	NA	41	True	AATAAA	-36	NA	62856167	62888875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_2474.known	chr1	+	5562	2	FSM	ENSG00000162543.6	ENST00000375099.4	5562	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCTCACCTCGTGTTT	20185964	True	NA	NA	False	AATAAA	-19	NA	20186095	20196050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20186154_20190546
transcript_24742.known	chr11	+	1993	10	FSM	ENSG00000168003.18	ENST00000377889.6	1993	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_1	611.37903217861	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGAAGTCTTCCCTCTGC	62841925	True	NA	19	True	AATAAA	-14	NA	62856143	62888853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24746.nic	chr11	+	1374	9	NIC	ENSG00000168003.18	novel	1926	9	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	688.631977183749	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTCCCTCTGCTTCTCTC	62881665	False	NA	26	True	AATAAA	-21	NA	62881677	62888860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_62881719_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_2475.known	chr1	-	510	2	FSM	ENSG00000187980.7	ENST00000442226.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCTTCTCACCGTGTGTG	-20186446	True	NA	NA	False	TTTAAA	-38	NA	20186486	20184241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20184625_20186359
transcript_24750.known	chr11	+	2265	11	FSM	ENSG00000168003.18	ENST00000680729.1	2265	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	771.981191480725	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841785	True	NA	46	True	AATAAA	-41	NA	62856003	62888880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856382_62871576_62871670_62881018_62881448_62881880_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24751.known	chr11	+	1905	9	FSM	ENSG00000168003.18	ENST00000681657.1	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	156.857369527224	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62873419	True	NA	46	True	AATAAA	-41	NA	62880895	62888880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24752.known	chr11	+	1512	8	FSM	ENSG00000168003.18	ENST00000679594.1	1512	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_1	161.620240195392	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCATGGTGAAGTCTT	62881136	True	NA	11	True	AATAAA	-6	NA	62881698	62888845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24753.known	chr11	+	1975	8	FSM	ENSG00000168003.18	ENST00000680297.1	1975	8	0	0	0	0	multi-exon	FALSE	canonical	3	1842	junction_2	160.721333178815	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCCCAAATAGGGTGTTTT	62873386	True	NA	28	True	TTTAAA	-35	NA	62880862	62888805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134
transcript_24754.known	chr11	+	2227	11	FSM	ENSG00000168003.18	ENST00000681467.1	2227	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	688.570809721121	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62841883	True	NA	46	True	AATAAA	-41	NA	62856101	62888880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62856454_62871576_62871670_62881018_62881448_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24755.known	chr11	+	1413	9	FSM	ENSG00000168003.18	ENST00000536981.6	1413	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	691.536141047596	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCAGGAATTTCTCTCCT	62881136	True	NA	46	True	AATAAA	-41	NA	62881698	62888880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62881759_62881892_62882067_62882907_62883000_62884456_62884526_62884631_62884691_62885176_62885358_62885464_62885609_62888134_62888219_62888330
transcript_24756.nnic	chr11	+	817	4	NNC	ENSG00000257002.1	novel	749	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.59966329107444	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	62909277	True	NA	16	True	AATAAA	-16	NA	62909541	62918361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_62909616_62910282_62910347_62910602_62910846_62917925
transcript_24757.known	chr11	+	749	3	FSM	ENSG00000257002.1	ENST00000543624.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	62909281	True	NA	16	True	AATAAA	-16	NA	62909545	62918361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_62909616_62910602_62910846_62917925
transcript_24758.nnic	chr11	+	1124	3	NNC	ENSG00000257002.1	novel	749	3	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	4	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTGTGTGTACTCAAC	62909261	True	NA	16	True	AATAAA	-16	NA	62909525	62918361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_62909971_62910602_62910846_62917925
transcript_2476.known	chr1	-	2326	2	FSM	ENSG00000162545.6	ENST00000375078.4	2326	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTCTCTTTTCTCTGCTT	-20485879	True	NA	0	True	AATAAA	-21	NA	20486210	20482390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20483720_20485213
transcript_24763.known	chr11	-	3042	6	FSM	ENSG00000168004.10	ENST00000540857.6	3042	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63491150	False	NA	-4	True	ATTAAA	-16	NA	63491167	63461403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490334_63490886
transcript_24764.known	chr11	-	1166	6	FSM	ENSG00000168004.10	ENST00000301790.4	1166	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	12.7184904764677	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATAGACCCACAGACTCTC	-63491177	False	NA	NA	False	AATATA	-6	NA	63491194	63463336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63488870_63488977_63490242_63490364_63490886
transcript_24773.known	chr11	-	571	4	FSM	ENSG00000168004.10	ENST00000394615.2	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	23.8932812499432	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTACTGACACAAGCAAA	-63490547	True	NA	NA	False	NA	NA	NA	63490965	63463475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63468356_63468466_63490886
transcript_24774.known	chr11	-	2599	4	FSM	ENSG00000168004.10	ENST00000536887.5	2599	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.1430919496424	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTTATTTTTCACTT	-63490521	True	NA	-4	True	ATTAAA	-16	NA	63490939	63461403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63463596_63466109_63466373_63490242_63490334_63490886
transcript_24777.nnic	chr11	-	656	4	NNC	ENSG00000168004.10	novel	2599	4	NA	NA	78	-22386	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	15.195028426722	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGGTTATGCTTTGTT	-63491072	False	NA	NA	False	AATAAA	-14	NA	63491089	63488531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_63488788_63488870_63488977_63490242_63490334_63490886
transcript_24779.nnic	chr11	-	569	4	NNC	ENSG00000168004.10	novel	2599	4	NA	NA	78	-22473	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	15.195028426722	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGCTGTCCTGGGCTG	-63491072	False	NA	NA	False	AATAAA	-26	NA	63491089	63488618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_63488788_63488870_63488977_63490242_63490334_63490886
transcript_2478.known	chr1	-	812	2	FSM	ENSG00000162545.6	ENST00000489020.1	812	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAAAATGGTTCTGTGCAC	-20484605	False	NA	NA	False	NA	NA	NA	20484645	20483186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20483720_20484366
transcript_24780.nnic	chr11	-	616	4	NNC	ENSG00000168004.10	novel	2599	4	NA	NA	61	-22473	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	15.195028426722	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAAGCTGTCCTGGGCTG	-63491089	False	NA	NA	False	AATAAA	-26	NA	63491106	63488618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_63488788_63488870_63488977_63490242_63490364_63490886
transcript_24783.nnic	chr11	+	456	2	NNC	ENSG00000287412.1	novel	335	2	NA	NA	-4911	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCAGTGAATTGGT	NA	False	NA	2	True	ATTAAA	-15	NA	63490572	63500609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63490821_63500401
transcript_24784.nnic	chr11	+	488	2	NNC	ENSG00000287412.1	novel	335	2	NA	NA	-4824	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTCTCAGTGAATTGGT	NA	False	NA	2	True	ATTAAA	-15	NA	63490659	63500609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63490940_63500401
transcript_24785.known	chr11	+	1425	9	FSM	ENSG00000133317.16	ENST00000340246.10	1425	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	3.13996417177012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCGTTCTCATCTAGCAA	63506331	False	NA	NA	False	AATAAA	-20	NA	63506362	63516774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63506528_63508552_63508642_63508774_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_24786.known	chr11	+	1699	9	FSM	ENSG00000133317.16	ENST00000394618.9	1699	9	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	2.81735691739616	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCGTTCTCATCTAGC	63506052	True	NA	NA	False	AATAAA	-18	NA	63506083	63516772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63506528_63508552_63508642_63508777_63508992_63509777_63509898_63510462_63510502_63511078_63511106_63511751_63511841_63515562_63515714_63516246
transcript_24790.nnic	chr11	+	1030	5	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7481	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.08220700148449	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	NA	False	NA	9	True	AATAAA	-23	NA	63529326	63546462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63529602_63536814_63536878_63539515_63539625_63544620_63544890_63546148
transcript_24791.nnic	chr11	+	894	4	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7408	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2.35702260395516	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	NA	False	NA	9	True	AATAAA	-23	NA	63529399	63546462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63529602_63539515_63539625_63544620_63544890_63546148
transcript_24792.nnic	chr11	+	690	3	NNC	ENSG00000133321.11	novel	758	4	NA	NA	-7331	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTCTACCATGTTTTTA	63529346	True	NA	9	True	AATAAA	-23	NA	63529476	63546462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63529584_63544620_63544890_63546148
transcript_24793.known	chr11	+	758	4	FSM	ENSG00000133321.11	ENST00000255688.8	758	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.35702260395516	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGACTTCTACCATGTT	63536792	False	NA	5	True	AATAAA	-19	NA	63536807	63546458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63536878_63539515_63539625_63544620_63544890_63546148
transcript_24804.known	chr11	-	1075	5	FSM	ENSG00000176485.13	ENST00000415826.3	1075	5	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_4	316.133278855612	2798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCGGCTATAAGGAAATT	-63603103	True	NA	NA	False	AAAAAG	-1	NA	63614433	63574461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598164_63613999_63614069_63614384
transcript_24811.known	chr11	-	678	4	FSM	ENSG00000176485.13	ENST00000394613.3	678	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	614.513538409764	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATAATAAGGCTTATTTT	-63614124	False	NA	8	True	NA	NA	NA	63614158	63574849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63575047_63590099_63590369_63598060_63598114_63613999
transcript_2482.known	chr1	-	2428	4	FSM	ENSG00000090432.7	ENST00000264198.5	2428	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	17.4547032821147	384	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGCCTGTTGCTTTGT	-20505416	True	NA	-1	True	ATTAAA	-15	NA	20508151	20499447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20501420_20502068_20502190_20503221_20503310_20507904
transcript_24822.known	chr11	-	6899	13	FSM	ENSG00000184743.13	ENST00000398868.8	6899	13	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_7	18.891503087073	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATCTGTGTTTTCTTTC	-63671328	False	140	-11	True	AATAAA	-14	NA	63671376	63624086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63629406_63631039_63631472_63633025_63633098_63635533_63635591_63636206_63636335_63643356_63643496_63644168_63644262_63646506_63646564_63651935_63651987_63652470_63652576_63658760_63658905_63659037_63659253_63671289
transcript_24827.known	chr11	+	2645	8	FSM	ENSG00000133318.14	ENST00000356000.7	2645	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	900.988731271125	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTGGCATCATTCTGC	63659690	True	NA	40	True	AATAAA	-21	NA	63681449	63759891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63704850_63704908_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_24834.known	chr11	+	814	2	FSM	ENSG00000133318.14	ENST00000538995.1	814	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTTTTCCTTTTTTTC	63659714	True	NA	NA	False	AATATA	-28	NA	63681473	63714479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63713970
transcript_24836.known	chr11	+	2532	7	FSM	ENSG00000133318.14	ENST00000537981.5	2532	7	0	0	0	0	multi-exon	FALSE	canonical	3	1800	junction_6	90.9183088760943	3182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGACTGTGGCATCA	63659740	True	NA	34	True	AATAAA	-15	NA	63681499	63759885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_24837.known	chr11	+	2524	6	FSM	ENSG00000133318.14	ENST00000341307.6	2524	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	785.458337532934	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAACAATGACTGTGGCA	63659686	True	NA	31	True	AATAAA	-12	NA	63681445	63759882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63758155
transcript_24838.known	chr11	+	3124	8	FSM	ENSG00000133318.14	ENST00000540798.5	3124	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	881.492866374645	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAATCAAATTCATAGGA	63659736	True	NA	NA	False	GATAAA	-27	NA	63681495	63758421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63718980_63721033_63749990_63750199_63752506_63752646_63753068_63753139_63753661_63753709_63756111_63756171_63758155
transcript_24839.known	chr11	+	1407	4	FSM	ENSG00000133318.14	ENST00000354497.4	1407	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	892.575424761901	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGAAAAAAATAACCTGCA	63659813	True	NA	-24	True	AATAAA	-36	NA	63681572	63759089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63681779_63749990_63750199_63756111_63756171_63758155
transcript_24842.nnic	chr11	-	840	2	Intergenic	novelGene_6	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGACTCTCTGAGTCTC	-63813193	False	NA	-8	True	AATAAA	-20	NA	63813332	63770956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr11_-_63771184_63812719
transcript_24843.known	chr11	+	1954	6	FSM	ENSG00000168005.9	ENST00000294244.9	1954	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	6.52380257212004	348	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCCGTCTGGGCCATCA	63805840	True	NA	26	True	AATAAA	-18	NA	63813455	63827716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63813814_63817804_63818135_63818215_63818366_63818526_63818653_63818801_63819003_63826927
transcript_24852.known	chr11	+	3649	8	FSM	ENSG00000110583.13	ENST00000377793.9	3649	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	22.8749930299978	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63936492	True	NA	11	True	AATAAA	-15	NA	63939001	63957319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_24856.nnic	chr11	+	1030	8	Fusion	ENSG00000176340.4_ENSG00000110583.13	novel	3649	8	NA	NA	-1	0	multi-exon	FALSE	canonical	2	2	junction_7	59.6452095344476	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	63938769	False	NA	48	True	AATAAA	-17	NA	63938957	63976543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_63939103_63945839_63945936_63946950_63947004_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63976224
transcript_24858.known	chr11	+	958	7	FSM	ENSG00000110583.13	ENST00000534965.5	958	7	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	56.1129812669641	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGAATGAAAGGGAGAGGG	63936486	True	NA	NA	False	NA	NA	NA	63938995	63954675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63939103_63945839_63945936_63952237_63952334_63952406_63952566_63952755_63952840_63953971_63954050_63954337
transcript_24861.nnic	chr11	+	890	3	NNC	ENSG00000110583.13	novel	4707	7	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	73	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGAGATGGCTTCCTG	63938769	False	NA	11	True	AATAAA	-15	NA	63938957	63957319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_63939103_63945839_63946222_63956956
transcript_24863.known	chr11	-	1257	11	FSM	ENSG00000133315.12	ENST00000255681.7	1257	11	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_8	34.035863438438	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-64162898	True	NA	-6	True	AATAAA	-16	NA	64166113	63998557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330_63999405_63999529_63999561_63999641_63999764_64000226_64000344_64015251_64015282_64151238_64151356_64152291_64152394_64165696
transcript_24865.known	chr11	-	230	4	FSM	ENSG00000133315.12	ENST00000541041.1	230	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	151.518975709315	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGTTGTGGCAGCTCCTAC	-63999235	False	NA	-18	True	AATAAA	-4	NA	63999361	63998569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998837_63998873_63998954_63999001_63999330
transcript_24866.nic	chr11	-	437	4	ISM	ENSG00000133315.12	ENST00000255681.7	1257	11	166593	0	-159	0	3prime_fragment	FALSE	canonical	3	297	junction_3	34.0326640482673	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-63999394	False	NA	-6	True	AATAAA	-16	NA	63999520	63998557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_63998688_63998837_63998873_63998954_63999037_63999330
transcript_24867.nnic	chr11	-	401	4	NNC	ENSG00000133315.12	novel	1257	11	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	159.451838775503	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCTACTGTCTGAGCTCT	-63999318	False	NA	-6	True	AATAAA	-16	NA	63999444	63998557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_63998688_63998837_63998873_63998954_63999077_63999330
transcript_24868.known	chr11	-	868	4	FSM	ENSG00000133315.12	ENST00000538595.1	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	156.22490909654	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGCTTTTCGGGGCTGC	-64162842	True	NA	NA	False	AATAAA	-15	NA	64166057	64148746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64149035_64151238_64151356_64152291_64152394_64165696
transcript_24874.known	chr11	-	431	3	FSM	ENSG00000133315.12	ENST00000542105.5	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	27	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTCCTACTGTCTGAGCT	-63999096	False	NA	-8	True	AATAAA	-14	NA	63999222	63998559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_63998688_63998837_63998873_63998954
transcript_2488.known	chr1	+	809	4	FSM	ENSG00000158825.6	ENST00000375071.4	809	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	14.1656862405839	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587400	True	NA	14	True	TATAAA	-20	NA	20589096	20618903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20589284_20604927_20605040_20613841_20613900_20618451
transcript_24880.known	chr11	+	1259	7	FSM	ENSG00000167770.13	ENST00000543988.1	1259	7	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	739.587497640858	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTCGTTGGGTTC	63986657	True	NA	NA	False	NA	NA	NA	63986841	63997850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63987039_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_2489.known	chr1	+	762	3	FSM	ENSG00000158825.6	ENST00000461985.1	762	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	33.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAAGCGTGTGTCTTGCTC	20587389	True	NA	14	True	TATAAA	-20	NA	20589085	20618903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20589284_20604927_20605040_20618451
transcript_24898.known	chr11	+	494	2	FSM	ENSG00000176340.4	ENST00000314133.4	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	4013	junction_1	0	28619	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAGAAATTCATTGTGCC	63926683	True	NA	48	True	AATAAA	-17	NA	63974619	63976543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63974795_63976224
transcript_24899.known	chr11	+	1701	7	FSM	ENSG00000167770.13	ENST00000538426.6	1701	7	0	0	0	0	multi-exon	FALSE	canonical	3	1801	junction_4	244.811775769785	5063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGCCGTCCGCCTGTG	63963492	True	NA	26	True	AATAAA	-18	NA	63986437	63998412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63996529_63996649_63996856_63996942_63997049_63997245_63997348
transcript_249.known	SIRV3	+	1807	2	FSM	SIRV3A	SIRV302	1807	2	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	0	2564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTAACAGGTTCTCAAC	NA	False	NA	NA	False	NA	NA	NA	1963	7822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_6057
transcript_24900.known	chr11	+	553	4	FSM	ENSG00000167770.13	ENST00000536443.1	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	1142.0710232828	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGTGTGGAAACAGTAT	63963523	True	NA	NA	False	AATAAA	-37	NA	63986468	63990632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63986515_63988336_63988399_63988653_63988753_63990286
transcript_24901.known	chr11	+	2315	2	FSM	ENSG00000167770.13	ENST00000447683.2	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	2533	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAAATAAAT	63963503	True	NA	NA	False	NA	NA	NA	63986448	63990585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_63986515_63988336
transcript_24904.known	chr11	+	2140	14	FSM	ENSG00000168439.17	ENST00000305218.9	2140	14	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_8	227.157844659903	3027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGGCCTTGAGTG	64152245	True	NA	21	True	AATAAA	-25	NA	64186170	64204543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644_64195814_64197270_64197398_64197492_64197596_64197853_64197975_64199939_64200037_64200168_64200294_64202875_64202913_64203124_64203229_64203449_64203623_64204053
transcript_24916.known	chr11	+	772	5	FSM	ENSG00000168439.17	ENST00000543847.1	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_4	36.6836135079411	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGGACATCTGTTGACCTT	64152299	True	NA	NA	False	TATAAA	-24	NA	64186224	64195876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64186271_64193077_64193288_64194188_64194331_64194478_64194621_64195644
transcript_24918.known	chr11	+	399	2	FSM	ENSG00000168439.17	ENST00000540736.1	399	2	0	0	0	0	multi-exon	FALSE	canonical	3	3229	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAAGGTAGCCATTAGTTG	64152308	True	NA	NA	False	NA	NA	NA	64186233	64193439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64186271_64193077
transcript_24927.known	chr11	-	968	8	FSM	ENSG00000149743.14	ENST00000317459.11	968	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	130.552515041547	858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCATCATCCTGTAGCT	-64222968	True	NA	-19	True	TATAAA	-45	NA	64226186	64223815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_24928.nnic	chr11	-	962	8	NNC	ENSG00000149743.14	novel	968	8	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	2	76	junction_7	104.82736050385	143	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGTTTGAAACCATGT	-64223027	True	NA	-36	True	AATAAA	-43	NA	64226245	64223832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226097
transcript_24929.nic	chr11	-	872	8	NIC	ENSG00000149743.14	novel	968	8	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	40	junction_7	116.964498364038	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTCGTTTGAAACCATGT	NA	False	NA	-36	True	AATAAA	-43	NA	64226248	64223832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226190
transcript_24944.known	chr11	-	865	7	FSM	ENSG00000149743.14	ENST00000394547.7	865	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	141.008273988916	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACATCTGGTCTTCCTTG	-64222932	True	NA	-2	True	AAAAAG	-45	NA	64226150	64223798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64226049
transcript_24958.known	chr11	-	681	7	FSM	ENSG00000149743.14	ENST00000545812.1	681	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	168.398749665456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCTTCCGCTCTGCCAA	-64222930	True	NA	NA	False	NA	NA	NA	64226148	64224202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64224211_64224284_64224342_64224542_64224718_64224794_64224971_64225498_64225581_64225785_64225870_64226049
transcript_24959.known	chr11	-	941	7	FSM	ENSG00000149743.14	ENST00000541278.5	941	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	175.207496034464	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTACATCTGGTCTTCCTT	NA	False	NA	-3	True	AAAAAG	-44	NA	64226254	64223799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785_64225870_64226049
transcript_24964.known	chr11	+	1110	6	FSM	ENSG00000149761.9	ENST00000279206.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	43.2222165095683	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	64221307	True	NA	37	True	AATAAA	-17	NA	64226273	64230016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64226428_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_24967.nic	chr11	+	1006	6	NIC	ENSG00000149761.9	novel	1110	6	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	114.300656166096	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCGTTGGCATCTGCTATT	NA	False	NA	37	True	AATAAA	-17	NA	64226247	64230016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64226298_64226634_64227133_64227567_64227667_64229246_64229345_64229477_64229572_64229849
transcript_24970.known	chr11	+	1288	7	FSM	ENSG00000110011.14	ENST00000321685.7	1288	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.5111575304707	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64225311	False	NA	13	True	AATAAA	-13	NA	64230277	64234281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64230320_64230431_64230941_64231870_64231965_64232429_64232615_64232703_64232866_64233893_64233981_64234072
transcript_24982.known	chr11	-	1726	6	FSM	ENSG00000149743.14	ENST00000539436.5	1726	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	143.344898758205	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	-64223011	True	NA	-33	True	TATAAA	-31	NA	64226229	64223829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224211_64224284_64224718_64224800_64225581_64225785_64225870_64226049
transcript_25.known	ERCC-00058	+	1120	1	FSM	ERCC-00058A	DQ459418	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00058_+_0_1100
transcript_25002.known	chr11	+	986	5	FSM	ENSG00000149761.9	ENST00000441250.6	986	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	115.285244068788	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGGATTCCGTTGGCA	64221323	True	NA	28	True	AATAAA	-8	NA	64226289	64230007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64226428_64226634_64227133_64229246_64229345_64229477_64229572_64229849
transcript_25011.known	chr11	+	1015	5	FSM	ENSG00000110011.14	ENST00000321460.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	69.9160210538329	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGTCCGGCTCCCTCC	64230727	False	NA	13	True	AATAAA	-13	NA	64230757	64234281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64230941_64231870_64231965_64232429_64232615_64232700_64232866_64233893
transcript_2502.known	chr1	+	2657	8	FSM	ENSG00000158828.8	ENST00000321556.5	2657	8	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_3	27.5251276665745	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTTTCTCTTC	20628961	True	NA	15	True	AGTAAA	-17	NA	20633457	20651511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_20633936_20637841_20638130_20639891_20639993_20644489_20644673_20645559_20645724_20648504_20648633_20648994_20649232_20650433
transcript_25029.known	chr11	+	938	5	NIC	ENSG00000110011.14	novel	1288	7	NA	NA	0	-3	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	76.0637068515596	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGCTCGTGTCCGGCTCCC	64225311	False	NA	10	True	AATAAA	-10	NA	64230277	64234278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64230320_64230431_64230941_64231870_64231965_64233893_64233981_64234072
transcript_25035.known	chr11	+	1071	3	FSM	ENSG00000149761.9	ENST00000535000.1	1071	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	162	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTCTGAAAATAATAAACGA	64221323	True	NA	4	True	NA	NA	NA	64226289	64229983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64227133_64229477_64229572_64229849
transcript_25041.known	chr11	-	684	6	FSM	ENSG00000149743.14	ENST00000546089.5	684	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	148.580752454684	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAAGTAACAAGAAA	-64222652	False	NA	-56	True	AATAAA	-23	NA	64225870	64223852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224284_64224342_64224542_64224718_64224800_64224971_64225498_64225581_64225785
transcript_25042.known	chr11	-	495	3	FSM	ENSG00000149743.14	ENST00000541928.1	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_1	17.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAAGAAAGAACTCGTTTG	-64221451	False	NA	-45	True	AATAAA	-34	NA	64224669	64223841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224342_64224542
transcript_25043.known	chr11	+	502	5	FSM	ENSG00000110011.14	ENST00000535246.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	70.8889977358969	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCCCCGAGATCGTGCCCC	64231878	False	NA	NA	False	NA	NA	NA	64231891	64234147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64231965_64232509_64232615_64232703_64232866_64233893_64233981_64234072
transcript_25044.known	chr11	-	382	4	FSM	ENSG00000149743.14	ENST00000546133.5	382	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	161.147965133497	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGTTTGAAACCATGTTTC	-64221448	False	NA	-33	True	TATAAA	-31	NA	64224666	64223829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64223968_64224099_64224163_64224284_64224342_64224542
transcript_25045.known	chr11	+	1805	7	FSM	ENSG00000173511.10	ENST00000309422.7	1805	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	18.9186856484975	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	64232391	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237419_64237656_64238355
transcript_25046.known	chr11	+	1704	7	FSM	ENSG00000173511.10	ENST00000426086.3	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	41.1366287172663	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCTTTCAGCATCTGCTGC	64232391	True	NA	NA	False	AATAGA	-29	NA	64234583	64239264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64234894_64235457_64235501_64235812_64236010_64236253_64236328_64237186_64237223_64237520_64237656_64238355
transcript_25056.known	chr11	+	574	6	FSM	ENSG00000173486.14	ENST00000309366.9	574	6	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	224.085162382519	9266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226090	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_25060.nnic	chr11	+	689	6	NNC	ENSG00000173486.14	novel	574	6	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	152	junction_1	449.845484583318	923	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64240921	False	NA	18	True	AAAACA	-39	NA	64240944	64244132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_64241133_64242418_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_25063.known	chr11	+	613	6	FSM	ENSG00000173486.14	ENST00000449942.6	613	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	493.549187011791	1252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCAAGGAGTAAGCCTGTG	64226151	False	NA	12	True	AAAACA	-33	NA	64241155	64244126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241239_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_25068.known	chr11	+	611	6	FSM	ENSG00000173486.14	ENST00000652094.1	611	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	509.72243427183	408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCCCAAGGAGTAAGCCTG	64240424	False	NA	10	True	AAAACA	-31	NA	64241664	64244124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241748_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_2507.known	chr1	-	1941	11	FSM	ENSG00000244038.11	ENST00000602624.7	1941	11	0	0	0	0	multi-exon	FALSE	canonical	3	3524	junction_4	190.042863586087	7254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCACCTGGCCCCGGTCCT	-20625590	True	NA	-4	True	AATAAA	-42	NA	20661369	20651776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20652529_20652620_20652728_20652850_20652972_20653626_20653775_20654222_20654372_20654613_20654708_20655439_20655535_20655675_20655780_20656100_20656188_20660880_20660992_20661196
transcript_25076.known	chr11	+	705	5	FSM	ENSG00000173486.14	ENST00000541388.1	705	5	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_1	237.664022308805	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAACAAAAAAACACTTA	64226069	True	NA	-11	True	AAAACA	-10	NA	64241073	64244103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64241133_64242383_64242559_64243198_64243498_64243840_64243877_64243967
transcript_25086.known	chr11	+	1655	6	FSM	ENSG00000286264.2	ENST00000652762.2	1655	6	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	445.521985989468	2467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTAAGCCTGTGTGTGTT	64226090	True	NA	18	True	AAAACA	-39	NA	64241094	64244132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64242214_64242383_64242559_64243198_64243312_64243450_64243498_64243840_64243877_64243967
transcript_25088.nnic	chr11	-	1086	7	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-5648	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_6	2615.63705858099	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-64251773	True	NA	-5	True	AATAAA	-28	NA	64252591	64244478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64246415_64246581_64248049_64248173_64248400_64248599_64252452
transcript_2509.known	chr1	-	3884	13	FSM	ENSG00000127483.19	ENST00000312239.10	3884	13	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_12	112.565875774539	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACCGTAGCTTATATT	-20781966	True	NA	-21	True	AATAAA	-19	NA	20786652	20742678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20786648
transcript_251.known	SIRV3	-	161	1	FSM	SIRV3D	SIRV311	161	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAAGATTTCGACTT	NA	False	NA	NA	False	NA	NA	NA	4762	4601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_4600_4800
transcript_25102.nnic	chr11	-	619	4	NNC	ENSG00000173457.11	novel	989	4	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2504.09744219349	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTCGGCTGGTCTCTTT	-64245009	False	NA	-5	True	AATAAA	-28	NA	64245827	64244478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64244823_64244929_64244963_64245203_64245288_64245669
transcript_25103.known	chr11	-	600	4	FSM	ENSG00000173457.11	ENST00000392210.6	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2504.09744219349	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGGCTCGGCTGGTCTCTT	-64245375	False	NA	-6	True	AATAAA	-27	NA	64246193	64244479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64244823_64244929_64244963_64245203_64245288_64246053
transcript_25111.nnic	chr11	-	598	3	NNC	ENSG00000257086.1	novel	853	4	NA	NA	-3097	-973	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_2	45.5	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGATGCAGAAAATAA	-64251773	True	NA	-6	True	AATACA	-17	NA	64252591	64247911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64248173_64248400_64248599_64252452
transcript_25112.known	chr11	+	533	2	FSM	ENSG00000256940.3	ENST00000663760.2	551	2	5	13	5	-13	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTGGAAAGTTCAATTAC	64245908	False	NA	6	True	ATTAAA	-9	NA	64245960	64248197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64246249_64247952
transcript_25113.known	chr11	+	391	2	FSM	ENSG00000256940.3	ENST00000544553.2	413	2	22	0	8	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACACCACAGAGGTTAATTA	64245911	False	NA	26	True	ATTAAA	-29	NA	64245963	64248217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64246090_64247952
transcript_25115.known	chr11	+	431	2	FSM	ENSG00000256940.3	ENST00000538355.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAGATTAAATAGGAAAA	64246840	True	NA	-14	True	AATGAA	-39	NA	64247053	64248177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64247260_64247952
transcript_25117.nic	chr11	-	544	2	ISM	ENSG00000257086.1	ENST00000545800.1	853	4	811	973	811	-973	internal_fragment	FALSE	canonical	3	114	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAAAGATGCAGAAAATAA	-64247865	False	639	-6	True	AATACA	-17	NA	64248683	64247911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_64248173_64248400
transcript_2512.known	chr1	-	6406	13	FSM	ENSG00000127483.19	ENST00000438032.6	6406	13	0	0	0	0	multi-exon	FALSE	canonical	2	66	junction_12	107.21664853101	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTGGTGCCTAGAGTAT	-20784452	True	NA	NA	False	ATTAAA	-22	NA	20787307	20740265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20745092_20745542_20745657_20747543_20747656_20749722_20749883_20757165_20757257_20765376_20765532_20767583_20767665_20770929_20771074_20773450_20773611_20776596_20776751_20779811_20779912_20780344_20780541_20787194
transcript_25121.nic	chr11	+	2096	8	NIC	ENSG00000173264.15	novel	2166	7	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	52.1109491413097	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	NA	False	NA	17	True	AATAAA	-19	NA	64284788	64289494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64285381_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_25136.known	chr11	+	2166	7	FSM	ENSG00000173264.15	ENST00000438980.7	2166	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	26.8850433430105	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCACCTGTCTGTCAT	64284882	True	NA	17	True	AATAAA	-19	NA	64285847	64289494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289036
transcript_25137.known	chr11	+	1485	7	FSM	ENSG00000173264.15	ENST00000313074.7	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	52.2230791891861	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGTTGTGCACCTGTCTGT	64285454	False	NA	14	True	AATAAA	-16	NA	64286419	64289491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64288602_64288722_64289142
transcript_25147.known	chr11	-	929	4	FSM	ENSG00000002330.14	ENST00000309032.8	929	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	53.8784640546563	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281368	True	NA	-3	True	AATAAA	-19	NA	64284665	64269829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64270338_64271612_64271804_64284181_64284377_64284630
transcript_25148.known	chr11	-	1157	3	FSM	ENSG00000002330.14	ENST00000394532.7	1157	3	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	14.5	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCTTTTCTGTGCGTCGA	-64281342	True	NA	-3	True	AATAAA	-19	NA	64284639	64269829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64270338_64271612_64271804_64284181
transcript_25149.known	chr11	+	1843	7	FSM	ENSG00000173264.15	ENST00000539851.5	1843	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	80.945798051673	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTCTGTCATCTGCCT	64284198	True	NA	23	True	AATAAA	-25	NA	64284810	64289500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64285263_64286509_64286882_64286964_64287015_64287720_64287947_64288064_64288215_64288339_64288469_64289036
transcript_25150.known	chr11	+	780	5	FSM	ENSG00000219435.6	ENST00000328404.8	780	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.52769256906871	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGTGAGTCAGTGCAGGAC	NA	False	NA	8	True	AATAAA	-16	NA	64300357	64304770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64300432_64300656_64300988_64303481_64303562_64303772_64303840_64304542
transcript_25151.nnic	chr11	+	706	4	NIC	ENSG00000219435.6	novel	780	5	NA	NA	-7	-1	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	4.49691252107735	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCGTGAGTCAGTGCAGGA	NA	False	NA	7	True	AATAAA	-15	NA	64300350	64304769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64300432_64300656_64300988_64303772_64303840_64304542
transcript_25152.known	chr11	+	2283	7	FSM	ENSG00000173153.17	ENST00000405666.5	2283	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	129.851196888336	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTTTGGTGTCATTG	64305916	True	NA	23	True	AATATA	-19	NA	64306226	64316743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64306449_64307167_64307505_64313950_64314068_64314238_64314368_64314740_64314912_64315000_64315271_64315706
transcript_25169.known	chr11	-	561	4	FSM	ENSG00000173113.7	ENST00000308774.6	561	4	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_2	2307.57727690513	36237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGGTTTCTCTTTGCA	-64254771	True	NA	-11	True	ATTAAA	-12	NA	64317558	64316694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64316969_64317057_64317133_64317263_64317366_64317448
transcript_25170.known	chr11	-	659	3	FSM	ENSG00000173113.7	ENST00000539854.1	659	3	0	0	0	0	multi-exon	FALSE	canonical	3	4956	junction_2	99.5	2153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAAGCGGTTTCTCTTTGC	-64254766	True	NA	-12	True	ATTAAA	-11	NA	64317553	64316695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64317148_64317263_64317366_64317448
transcript_25171.known	chr11	-	704	2	FSM	ENSG00000173113.7	ENST00000535126.1	704	2	0	0	0	0	multi-exon	FALSE	canonical	3	5155	junction_1	0	939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTTTCTCTTTGCAGCAA	-64254723	True	NA	-7	True	ATTAAA	-16	NA	64317510	64316690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64317148_64317263
transcript_25172.known	chr11	-	559	2	FSM	ENSG00000173113.7	ENST00000537918.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4994	junction_1	0	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGTTTCTCTTTGCAG	-64317330	False	NA	-10	True	ATTAAA	-13	NA	64317341	64316693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64316969_64317057
transcript_25180.known	chr11	+	860	6	FSM	ENSG00000126432.14	ENST00000265462.9	860	6	0	0	0	0	multi-exon	FALSE	canonical	3	2920	junction_3	297.362136123616	28315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	64291263	True	NA	18	True	AATAAA	-20	NA	64318120	64321811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64318387_64319733_64319869_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_25193.nnic	chr11	+	826	5	NIC	ENSG00000126432.14	novel	860	6	NA	NA	-101	0	combination_of_known_splicesites	FALSE	canonical	3	269	junction_1	1402.86142847396	2719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTGGTTATGAATGGC	64317903	True	NA	18	True	AATAAA	-20	NA	64318019	64321811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_64318387_64320660_64320793_64320864_64320904_64321006_64321069_64321585
transcript_252.known	SIRV3	-	479	3	FSM	SIRV3B	SIRV308	479	3	0	0	0	0	multi-exon	FALSE	canonical	3	6161	junction_2	18	13667	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTATTTGTATGGCGGA	NA	False	NA	NA	False	NA	NA	NA	1982	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_-_1168_1532_1765_1902
transcript_25203.known	chr11	+	463	4	FSM	ENSG00000126432.14	ENST00000347941.4	463	4	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	1548.48657296945	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTGGGGCCCTGCAA	64291324	True	NA	-51	True	NA	NA	NA	64318181	64321742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64318387_64320864_64320904_64321006_64321069_64321585
transcript_25204.known	chr11	+	596	5	FSM	ENSG00000126432.14	ENST00000352435.8	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	1468.75551062796	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGCTGGGGCCCTGC	64291324	True	NA	-53	True	NA	NA	NA	64318181	64321740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64318387_64319733_64319869_64320864_64320904_64321006_64321069_64321585
transcript_25205.nnic	chr11	-	771	4	NNC	ENSG00000236935.2	novel	563	3	NA	NA	-670	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.24721912892465	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCCTAGGCTTCTTCCT	-64340764	False	NA	2	True	AATAAA	-18	NA	64340797	64325049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_64325332_64327483_64327537_64339899_64340079_64340540
transcript_25208.known	chr11	+	4934	27	FSM	ENSG00000168071.22	ENST00000356786.10	4934	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.8742758761641	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTGCTCTGTCTGTTGGC	NA	False	NA	13	True	AATAAA	-21	NA	64340203	64357534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64340327_64340606_64340753_64340906_64341019_64341108_64341179_64341269_64341329_64341420_64341505_64341598_64341743_64341993_64342140_64342293_64342376_64342521_64342681_64343178_64343326_64343506_64343616_64343777_64343915_64343996_64345158_64349330_64349459_64349550_64349669_64351159_64351256_64351475_64351617_64352129_64352387_64352743_64352888_64353053_64353241_64353350_64353497_64353714_64353814_64354003_64354171_64355193_64355401_64355559_64355629_64357038
transcript_2521.known	chr1	-	473	4	FSM	ENSG00000127483.19	ENST00000437575.5	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	178.349843472504	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTCCACCTGCTACTTC	-20784468	True	NA	-93	True	NA	NA	NA	20787323	20776697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_20776751_20779811_20779912_20780349_20780541_20787194
transcript_25210.known	chr11	+	779	2	FSM	ENSG00000168071.22	ENST00000472524.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTTGCTCTGTCTGTT	64355296	False	NA	10	True	AATAAA	-18	NA	64355342	64357531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_64355629_64357038
transcript_25211.known	chr11	-	985	2	FSM	ENSG00000231680.1	ENST00000457725.1	985	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGTGTCATGCACCTGT	NA	False	NA	NA	False	AATAAA	-31	NA	64395831	64394341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64394700_64395204
transcript_25216.known	chr11	-	598	6	FSM	ENSG00000068831.19	ENST00000430645.1	598	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	80.8816419220085	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTCCCAGCGGAGTTTG	-64744656	True	NA	NA	False	NA	NA	NA	64744867	64741067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744332_64744483_64744741
transcript_25220.known	chr11	-	642	5	FSM	ENSG00000068831.19	ENST00000377487.5	642	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	52.7873090808766	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64744648	True	NA	-1	True	AATAAA	-17	NA	64744859	64740865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744741
transcript_25222.known	chr11	-	583	5	FSM	ENSG00000068831.19	ENST00000377489.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.6378000768195	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64745310	True	NA	-1	True	AATAAA	-17	NA	64745333	64740865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64745274
transcript_25223.nic	chr11	-	675	4	ISM	ENSG00000068831.19	ENST00000421556.5	2168	17	14152	0	5296	0	3prime_fragment	FALSE	canonical	3	42	junction_3	3.68178700572909	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATCAGCGCCTAGAATCCC	-64729951	False	NA	-1	True	AATAAA	-24	NA	64729970	64726910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_64727132_64727295_64727361_64728862_64729043_64729761
transcript_25225.known	chr11	-	444	4	FSM	ENSG00000068831.19	ENST00000394428.5	444	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	78.0185163207356	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64741349	True	NA	-1	True	AATAAA	-17	NA	64742937	64740865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742033_64742793
transcript_25228.known	chr11	-	453	3	FSM	ENSG00000068831.19	ENST00000394429.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	85	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64741349	True	NA	-1	True	AATAAA	-17	NA	64742937	64740865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741534_64742793
transcript_25229.known	chr11	-	667	5	FSM	ENSG00000068831.19	ENST00000377486.7	667	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	72.2058688750437	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGAGGGTCATGTTGCT	-64744122	False	NA	-1	True	AATAAA	-17	NA	64744145	64740865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64741080_64741438_64741502_64742009_64742113_64742793_64742938_64744002
transcript_2523.known	chr1	-	5067	19	FSM	ENSG00000117298.16	ENST00000374893.11	5067	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_18	32.994621709127	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCATGTGTCTGGGTGTCT	-21289701	True	NA	-4	True	AATAAA	-15	NA	21290463	21217249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
transcript_25230.known	chr11	-	2866	20	FSM	ENSG00000068976.14	ENST00000164139.4	2866	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_17	5.26631484267326	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCTTACTCCTCTTTGT	-64759355	True	NA	-10	True	AATAAA	-17	NA	64759974	64746397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64746809_64746920_64746988_64747223_64747359_64750375_64750584_64751324_64751467_64751596_64751656_64751923_64752072_64752402_64752505_64753072_64753188_64753518_64753683_64753878_64754026_64754252_64754346_64754692_64754837_64755272_64755356_64755446_64755559_64757778_64757911_64758245_64758350_64758436_64758516_64758602_64758705_64759655
transcript_25234.known	chr11	-	2854	13	FSM	ENSG00000168066.21	ENST00000377394.7	2854	13	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	241.094840720871	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64778731	False	NA	-22	True	AATAAA	-22	NA	64778747	64764605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64765519_64766899_64767080_64767191_64767252_64767566_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_25236.known	chr11	-	3282	13	FSM	ENSG00000168066.21	ENST00000377390.8	3282	13	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	106.613658703856	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTCTTTATTTTCTTT	-64762499	True	NA	-22	True	AATAAA	-22	NA	64778542	64764605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64766156_64766899_64767080_64767191_64767252_64767570_64767845_64768105_64768287_64769021_64769130_64769222_64769339_64769425_64769610_64769963_64770054_64770255_64770409_64773429_64773506_64776497_64776627_64778361
transcript_2524.known	chr1	-	5099	19	FSM	ENSG00000117298.16	ENST00000415912.6	5099	19	0	0	0	0	multi-exon	TRUE	canonical	3	129	junction_18	18.2730490336904	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTCTGGGTGTCTGTC	-21342260	True	NA	-1	True	AATAAA	-18	NA	21345504	21217246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21220132_21221746_21221843_21225249_21225441_21227158_21227227_21227930_21228042_21233557_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21345375
transcript_25245.known	chr11	-	983	2	FSM	ENSG00000168066.21	ENST00000463343.1	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAATGACAAAA	-64778747	False	NA	NA	False	NA	NA	NA	64778763	64776045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64776627_64778361
transcript_25250.known	chr11	-	2661	10	FSM	ENSG00000133895.18	ENST00000440873.6	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_9	104.835438358422	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCTGTTTTGTACATA	-64805885	True	NA	-22	True	NA	NA	NA	64810581	64803584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64804817_64805033_64805199_64805634_64805771_64806231_64806369_64807010_64807099_64807178_64807220_64807551_64807681_64807890_64808100_64809664_64810133_64810525
transcript_25251.known	chr11	-	4453	5	FSM	ENSG00000110047.18	ENST00000320631.8	4453	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	6.89202437604511	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGGGTCCTGAAAGCTT	-64874996	True	NA	NA	False	ATTAAA	-21	NA	64878621	64851641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64854858_64855321_64855487_64859923_64860337_64874420_64874519_64878060
transcript_25255.known	chr11	-	752	4	FSM	ENSG00000149735.7	ENST00000279168.7	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.69967317119759	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTTTATTAAGTCT	-64935785	False	NA	1	True	AATAAA	-17	NA	64935893	64934470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64934875_64934990_64935176_64935357_64935461_64935833
transcript_25256.known	chr11	-	466	3	FSM	ENSG00000149735.7	ENST00000532246.1	466	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGTGGGGAGCCGG	-64935774	True	NA	NA	False	NA	NA	NA	64935882	64934861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64935176_64935357_64935461_64935833
transcript_25257.known	chr11	-	2066	3	FSM	ENSG00000168062.10	ENST00000301887.9	2066	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTTTGCCTAGTTACTT	-64996861	True	NA	-2	True	AATAAA	-17	NA	64996971	64987944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_64989813_64994447_64994550_64996875
transcript_25259.known	chr11	+	1908	8	FSM	ENSG00000110025.13	ENST00000377244.8	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_5	23.4076561694446	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCTAATTCATTTAGTA	65026186	True	NA	16	True	AATAAA	-17	NA	65027438	65040572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65038571_65038830_65039685
transcript_2526.known	chr1	-	2172	14	FSM	ENSG00000117298.16	ENST00000526194.5	2172	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	35.6805351937997	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATCTCAGGACAGGGAGC	-21289701	True	NA	NA	False	NA	NA	NA	21290463	21233104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21233662_21235849_21235928_21236745_21236845_21238133_21238245_21244988_21245104_21247220_21247364_21255946_21256139_21257524_21257591_21258692_21258840_21260270_21260393_21272698_21272912_21279190_21279333_21290069_21290157_21290363
transcript_25260.known	chr11	+	771	7	FSM	ENSG00000110025.13	ENST00000352068.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	70.4146449413914	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGAGTGGGCCATTCCCT	65026285	False	NA	NA	False	NA	NA	NA	65027537	65039792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65027637_65032167_65032204_65032430_65032552_65034846_65034963_65035058_65035207_65035519_65035664_65039685
transcript_25275.known	chr11	+	932	5	FSM	ENSG00000213465.8	ENST00000246747.9	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_4	204.878470074335	15746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987819	True	NA	19	True	AATAAA	-17	NA	65014159	65022184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720
transcript_25276.known	chr11	+	830	6	FSM	ENSG00000213465.8	ENST00000529384.5	830	6	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_5	1342.06944678731	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGCTGAGTCATTTGT	64987839	True	NA	19	True	AATAAA	-17	NA	65014179	65022184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65020418_65020500_65021720_65021889_65021970
transcript_25277.known	chr11	+	795	4	FSM	ENSG00000213465.8	ENST00000533729.1	795	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	1673.59553058677	623	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATAAACCGCTCCTTGCC	64987851	True	NA	-5	True	NA	NA	NA	65014191	65022160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570_65018734_65021720
transcript_25278.known	chr11	+	1228	3	FSM	ENSG00000213465.8	ENST00000524585.1	1228	3	0	0	0	0	multi-exon	FALSE	canonical	3	3669	junction_1	54	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTCCCCCATATACCCTT	64987830	True	NA	-79	True	AAAAAG	-32	NA	65014170	65019585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65014273_65018363_65018475_65018570
transcript_25285.known	chr11	-	495	6	FSM	ENSG00000168060.16	ENST00000533842.5	495	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5.00399840127872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTAGTCACATTCCCGGG	-65047787	True	NA	NA	False	NA	NA	NA	65047861	65045429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646_65047739_65047841
transcript_25286.known	chr11	-	800	5	FSM	ENSG00000168060.16	ENST00000526516.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.8613807855649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCACCCTGAGGCCTGT	NA	False	NA	NA	False	NA	NA	NA	65047937	65045303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65046188_65046363_65047646
transcript_25287.known	chr11	-	566	4	FSM	ENSG00000168060.16	ENST00000532802.5	566	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.65685424949238	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGTGCGGCAGCCACCCT	-65047812	True	NA	NA	False	NA	NA	NA	65047886	65045312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65045458_65045821_65045915_65046026_65046115_65047646
transcript_25289.known	chr11	+	755	3	FSM	ENSG00000168061.17	ENST00000533017.1	755	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGGCAGAGGAGGAAGA	65040513	True	NA	NA	False	NA	NA	NA	65040940	65044673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65041107_65043024_65043165_65044224
transcript_25291.nnic	chr11	+	823	2	NIC	ENSG00000168061.17	novel	1563	2	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTCACTAGATGTGATTT	NA	False	NA	16	True	AATAAA	-21	NA	65040887	65044828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65041107_65044224
transcript_25292.nic	chr11	-	400	3	ISM	ENSG00000146670.10	ENST00000525464.1	672	7	12505	-65	12479	0	3prime_fragment	FALSE	canonical	2	5	junction_1	1.5	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCTTCACCAAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	65066910	65066299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65066474_65066551_65066680_65066812
transcript_25293.nic	chr11	-	478	2	ISM	ENSG00000146670.10	ENST00000529290.5	789	6	12479	0	12479	0	3prime_fragment	FALSE	canonical	3	8	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGCTTCACCAAGTGT	NA	False	NA	NA	False	AATAAA	-13	NA	65066910	65066299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65066680_65066812
transcript_25294.known	chr11	+	2661	10	FSM	ENSG00000149823.9	ENST00000279281.8	2661	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_3	32.7847450222331	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTCCTTGTCTGCGTTCC	65088766	True	NA	27	True	NA	NA	NA	65096213	65111862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65096479_65096997_65097128_65107580_65107728_65107802_65108023_65108196_65108915_65109279_65109496_65109704_65109924_65110481_65110604_65110693_65110782_65111326
transcript_25297.known	chr11	+	1578	10	FSM	ENSG00000149809.17	ENST00000279263.14	1578	10	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	42.2859168687649	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104001	True	NA	20	True	AATGAA	-15	NA	65111871	65116230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65112068_65112514_65112712_65112810_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_25299.known	chr11	+	1382	8	FSM	ENSG00000162300.13	ENST00000294258.8	1382	8	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_3	22.1082679150602	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCGAGGCAGCCTTTTGC	65081995	True	NA	NA	False	AATAAA	-18	NA	65084221	65088398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65084379_65084690_65084801_65085114_65085227_65086414_65086609_65086719_65086793_65086927_65087075_65087315_65087434_65087927
transcript_253.known	SIRV3	+	779	5	FSM	SIRV3A	SIRV307	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	1338	junction_4	964.45253252817	5178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTAACGTCTCGTAAGAC	NA	False	NA	NA	False	NA	NA	NA	1963	8939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4003_4081_4574_4775_6057_6334_8755
transcript_25310.known	chr11	+	2094	8	FSM	ENSG00000149809.17	ENST00000530650.5	2094	8	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	38.3804797324082	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGAGATGCTCTTCCTCCT	65104031	False	NA	20	True	AATGAA	-15	NA	65111901	65116230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65112866_65113219_65113415_65113490_65113595_65114712_65114833_65114912_65115082_65115313_65115395_65115475_65115599_65115892
transcript_25327.known	chr11	+	384	2	FSM	ENSG00000162300.13	ENST00000526791.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACGAAAGGATGAGTCTC	65084234	True	NA	NA	False	AATAAA	-16	NA	65084289	65085003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65084361_65084690
transcript_25328.known	chr11	+	426	2	FSM	ENSG00000149823.9	ENST00000528050.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGCCCCCATTCTCCC	65088766	True	NA	NA	False	NA	NA	NA	65096213	65097158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65096479_65096997
transcript_25329.known	chr11	-	1299	1	FSM	ENSG00000174276.7	ENST00000310597.6	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	62	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTTGCTTGTTTCTGA	-65117682	False	81804	-8	True	AATAAA	-15	NA	65117701	65116402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65116400_65117700
transcript_25330.known	chr11	-	3048	16	FSM	ENSG00000162298.19	ENST00000294256.12	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	27.9248197049785	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131019	True	NA	-29	True	AATAAA	-16	NA	65134532	65127278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130173_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_25331.known	chr11	-	3038	16	FSM	ENSG00000162298.19	ENST00000377190.8	3038	16	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	25.779061270729	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGGGTTTGTGTCACA	-65131006	True	NA	-29	True	AATAAA	-16	NA	65134519	65127278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65128489_65128562_65128715_65129728_65129916_65130001_65130176_65130250_65130380_65130659_65130824_65130919_65131037_65131131_65131198_65131273_65131374_65131469_65131597_65132247_65132352_65132731_65132781_65132921_65133075_65133159_65133253_65133469_65133619_65134455
transcript_25340.known	chr11	-	507	5	FSM	ENSG00000149806.11	ENST00000526555.5	507	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2947.70287681781	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCAGTACAACCGGCGCT	-65040309	True	NA	38	True	NA	NA	NA	65122113	65120756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65121940
transcript_25341.known	chr11	-	538	5	FSM	ENSG00000149806.11	ENST00000527548.5	538	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2947.70287681781	3293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	-65040309	True	NA	-5	True	AATAAA	-20	NA	65122113	65120630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122035
transcript_25344.known	chr11	+	2065	4	FSM	ENSG00000149792.9	ENST00000524482.5	2065	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	359.188901090591	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCTGAAACTGTCTCCAA	65122163	False	NA	19	True	ATTAAA	-29	NA	65122182	65127356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122341_65124501_65124653_65125487_65125613_65125725
transcript_25345.known	chr11	+	2026	4	FSM	ENSG00000149792.9	ENST00000279242.7	2026	4	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_2	38.8415584994561	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAACAACTCTTGTAACAC	65116862	True	NA	34	True	ATTAAA	-44	NA	65122320	65127371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122425_65124501_65124653_65125487_65125613_65125725
transcript_25346.known	chr11	-	355	4	FSM	ENSG00000149806.11	ENST00000525297.5	355	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3242.11086930859	2748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCGCATTGTTTCATCTTTA	-65121802	False	NA	-5	True	AATAAA	-20	NA	65121821	65120630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121540_65121738
transcript_25349.known	chr11	+	752	3	FSM	ENSG00000149792.9	ENST00000528529.1	752	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	409	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATTTTTAGTAGAGA	65116832	True	NA	NA	False	NA	NA	NA	65122290	65126302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122341_65125487_65125613_65125725
transcript_25350.known	chr11	+	518	3	FSM	ENSG00000149792.9	ENST00000534078.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	398.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCTTGCTTGCATAAAGGA	65116852	True	NA	-28	True	NA	NA	NA	65122310	65126004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65122425_65125487_65125613_65125725
transcript_25352.known	chr11	-	1484	1	FSM	ENSG00000149806.11	ENST00000531357.1	1484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATCGCATTGTTTCATCT	-65040313	True	NA	-8	True	AATAAA	-17	NA	65122117	65120633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120600_65122100
transcript_25353.known	chr11	-	506	5	FSM	ENSG00000149806.11	ENST00000529639.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	5602	junction_4	543.190114048479	73344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-65040330	True	NA	-4	True	AATAAA	-21	NA	65122134	65120629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738_65121822_65122089
transcript_25354.known	chr11	-	697	4	FSM	ENSG00000149806.11	ENST00000531743.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	6652	junction_3	191.31184548329	5422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCATTGTTTCATCTTTAC	-65122038	False	NA	-4	True	AATAAA	-21	NA	65122057	65120629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65120980_65121037_65121499_65121645_65121738
transcript_25355.known	chr11	-	461	4	FSM	ENSG00000149806.11	ENST00000279259.7	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	2877.03937330645	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTCATCGCATTGTTTC	-65040349	True	NA	-12	True	AATAAA	-13	NA	65122153	65120637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65120807_65121499_65121645_65121738_65121822_65122089
transcript_25356.known	chr11	+	991	7	FSM	ENSG00000204710.2	ENST00000377185.2	991	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	0.74535599249993	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGGCCCACTGACTGAC	NA	False	NA	NA	False	NA	NA	NA	65170153	65173244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65170262_65171326_65171500_65171942_65172002_65172245_65172332_65172433_65172606_65172683_65173015_65173182
transcript_25361.known	chr11	+	3083	22	FSM	ENSG00000014216.16	ENST00000533820.5	3083	22	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	166.65951005043	445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65181166	False	NA	21	True	AATAAA	-22	NA	65181193	65212006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65181411_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_25362.known	chr11	+	2952	22	FSM	ENSG00000014216.16	ENST00000279247.11	2952	22	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	99.291047019057	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65174003	True	NA	21	True	AATAAA	-22	NA	65181927	65212006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_25363.known	chr11	+	2960	22	FSM	ENSG00000014216.16	ENST00000524773.5	2960	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	172.337510969246	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTGTTTCTCCCCAG	65181683	False	NA	16	True	AATAAA	-17	NA	65181744	65212001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65181844_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_25366.nic	chr11	+	2958	22	NIC	ENSG00000014216.16	novel	3086	21	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	168.279785380777	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTCTCCCCAGCCTAC	65180058	True	NA	21	True	AATAAA	-22	NA	65182449	65212006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65182542_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_25373.nic	chr11	+	1429	10	ISM	ENSG00000014216.16	ENST00000279247.11	2952	22	-17	23100	-8	217	5prime_fragment	FALSE	canonical	3	410	junction_1	114.811923500035	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCATGCTTGACTCACCG	65181834	True	NA	11	True	ATTAAA	-20	NA	65181910	65188906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_65182014_65182700_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585
transcript_25383.known	chr11	-	1662	2	FSM	ENSG00000254614.2	ENST00000526623.2	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTTTTGTTTCTCAAAATG	-65181753	True	NA	-24	True	AATAAA	-22	NA	65181834	65180020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65181073_65181224
transcript_25384.known	chr11	+	3086	21	FSM	ENSG00000014216.16	ENST00000527323.5	3086	21	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	53.0319714889047	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACATCTGTCTGTGAT	65180070	True	NA	2	True	AATAAA	-3	NA	65182461	65211987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65182969_65183127_65183198_65183473_65183593_65185916_65186051_65186169_65186339_65187214_65187299_65187954_65188041_65188413_65188489_65188585_65188747_65204682_65204859_65205709_65205722_65206462_65206675_65206779_65206820_65208054_65208121_65208204_65208263_65209322_65209388_65209848_65209918_65210017_65210097_65210335_65210453_65210813_65210873_65211259
transcript_25385.known	chr11	+	564	4	FSM	ENSG00000014216.16	ENST00000527699.5	564	4	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	328.522280658236	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGGCTCCCCTGGGGAG	65182372	False	NA	NA	False	NA	NA	NA	65182434	65183592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65182542_65182700_65182969_65183127_65183198_65183473
transcript_25388.nnic	chr11	+	1494	7	NIC	ENSG00000197847.12	novel	1939	10	NA	NA	-6	84	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	8.64902049688608	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAGGTTTAATTGAC	65213505	True	NA	17	True	TATAAA	-29	NA	65213866	65242439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65214254_65214325_65214430_65222472_65222597_65223464_65223581_65236408_65236518_65236684_65236889_65241989
transcript_25389.nic	chr11	+	1751	5	ISM	ENSG00000197847.12	ENST00000525264.5	1419	6	-47	1660	-39	528	5prime_fragment	FALSE	canonical	2	16	junction_3	3.90512483795333	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGATGGTTAATCA	65213439	True	NA	NA	False	NA	NA	NA	65213800	65224380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_65214254_65214325_65214430_65217534_65217689_65222472_65222597_65223464
transcript_2539.known	chr1	+	1417	3	FSM	ENSG00000142794.19	ENST00000478653.6	1417	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	47	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTCTATCTTTTACTGA	21438281	True	NA	NA	False	AATAAA	-14	NA	21440137	21454306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_21440349_21444947_21445220_21453372
transcript_25394.known	chr11	+	3544	18	FSM	ENSG00000014138.9	ENST00000265465.8	3544	18	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_4	11.4894264615439	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGCAGCTGTTTTATTTCA	65260247	True	NA	11	True	AGTAAA	-21	NA	65261961	65298685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65275891_65275999_65278729_65278924_65279537_65279627_65280991_65281148_65281669_65281733_65282478_65282522_65287715_65287841_65289049_65289089_65289798_65289873_65294152_65294262_65294545_65294653_65295539_65295600_65295863_65295991_65297119
transcript_25397.nnic	chr11	+	985	5	NNC	ENSG00000014138.9	novel	1499	7	NA	NA	-104	-6192	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	63.5491935432701	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTTTCTCTGTGAGTG	NA	False	NA	NA	False	AATAAA	-20	NA	65261815	65272634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65262372_65266581_65266707_65267476_65267569_65268671_65268730_65272480
transcript_254.known	SIRV3	+	1083	8	FSM	SIRV3A	SIRV304	1083	8	0	0	0	0	multi-exon	FALSE	canonical	3	1354	junction_6	995.470804418181	5787	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGGTTAACGTCTCGTAAG	NA	False	NA	NA	False	NA	NA	NA	1963	8937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4003_4081_4568_4780_6057_6334_7270_7367_7872_7989_8124_8208_8755
transcript_2540.known	chr1	+	2536	12	FSM	ENSG00000162551.14	ENST00000374840.8	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_5	55.5584719161074	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGCTGAGTCTTTGTGGT	21498924	True	NA	22	True	AATAAA	-23	NA	21509422	21578410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_21509518_21553977_21554143_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_25401.nnic	chr11	+	1660	3	NNC	ENSG00000149798.5	novel	1963	2	NA	NA	-51	12	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	43.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACAGCTTCTCCAGCTTA	65312683	True	NA	18	True	AATAAA	-27	NA	65314814	65322429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65314955_65320543_65321316_65321681
transcript_25402.known	chr11	+	1963	2	FSM	ENSG00000149798.5	ENST00000279249.3	1963	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGCAAGGGACCAACAGC	65312734	True	NA	6	True	AATAAA	-15	NA	65314865	65322417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65314955_65320543
transcript_25405.known	chr11	+	2462	12	FSM	ENSG00000133884.10	ENST00000252268.8	2462	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	283.331946196572	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCTGGATGGTTTATCT	65324171	True	NA	18	True	AATAAA	-18	NA	65333866	65352983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65344579_65344622_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_25406.known	chr11	+	3714	11	FSM	ENSG00000133884.10	ENST00000528416.6	3714	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_4	66.0950830243824	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGGCCCAAGCATGCAG	65324156	True	NA	4	True	AATAAA	-18	NA	65333851	65354262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398_65341563_65343744_65343838_65343990_65344070_65345665_65345804_65345929_65346059_65346246_65346360_65348849_65348932_65351682
transcript_25408.known	chr11	+	940	4	FSM	ENSG00000133884.10	ENST00000444314.6	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_1	42.9055810925442	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTACTAGGGAAGCTGAG	65324156	True	NA	NA	False	ATTAAA	-39	NA	65333851	65342002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65333919_65340384_65340546_65340965_65341074_65341398
transcript_25411.known	chr11	-	539	2	FSM	ENSG00000162241.13	ENST00000529431.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	65382642	65381587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65381970_65382485
transcript_25412.known	chr11	+	366	2	FSM	ENSG00000126391.14	ENST00000531296.1	366	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAGAAGTCAGAGGCTC	65384553	True	NA	NA	False	AAGAAA	-28	NA	65386620	65387261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65386762_65387036
transcript_25415.known	chr11	+	844	3	FSM	ENSG00000173727.13	ENST00000619960.4	844	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	3	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGATAGCGCCGCGTGTTT	65455145	True	NA	NA	False	AATGAA	-7	NA	65455257	65456318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65455332_65455436_65455582_65455693
transcript_25417.nnic	chr11	+	529	3	NIC	ENSG00000173727.13	novel	646	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCGTGCTTCAAAATCT	65455145	True	NA	NA	False	NA	NA	NA	65455257	65456610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65455332_65455436_65455582_65456300
transcript_25418.nnic	chr11	+	505	3	FSM	ENSG00000173727.13	ENST00000637245.2	454	3	-51	0	-51	0	multi-exon	FALSE	canonical	0	0	junction_2	5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGCTGAGAAT	NA	False	NA	NA	False	AATACA	-20	NA	65455205	65456871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65455332_65455436_65455582_65456637
transcript_25419.known	chr11	+	800	3	FSM	ENSG00000173727.13	ENST00000309775.8	800	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGCTCACGCCTGTAATC	65455200	False	NA	NA	False	NA	NA	NA	65455312	65466720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65455332_65455436_65455582_65466084
transcript_25420.known	chr11	+	646	4	FSM	ENSG00000173727.13	ENST00000637877.1	646	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.10960933531265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCGTGCTTCAAAATCT	65455154	True	NA	NA	False	NA	NA	NA	65455266	65456610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65455332_65455436_65455582_65455693_65455820_65456300
transcript_25423.known	chr11	+	8708	1	FSM	ENSG00000251562.9	ENST00000534336.1	8708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16769	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGGTTCTTTTGTGA	65497125	True	NA	9	True	AATAAA	-18	NA	65497761	65506469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65497800_65506500
transcript_25424.known	chr11	+	394	2	FSM	ENSG00000251562.9	ENST00000617791.1	394	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAGACAAGCTAGGAA	65226538	True	NA	33	True	GATAAA	-28	NA	65499041	65499785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65499339_65499688
transcript_25425.known	chr11	+	2636	18	FSM	ENSG00000142186.18	ENST00000270176.10	2636	18	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_13	57.3256948856065	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522193	True	NA	14	True	AATAAA	-13	NA	65525082	65538704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_25426.known	chr11	+	2583	18	FSM	ENSG00000142186.18	ENST00000420247.6	2583	18	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_13	77.4220447313336	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522195	True	NA	14	True	AATAAA	-13	NA	65525084	65538704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65537036_65537129_65537808_65537881_65537966_65538183_65538269_65538325_65538441
transcript_25428.known	chr11	+	2584	17	FSM	ENSG00000142186.18	ENST00000525364.5	2584	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_16	136.81579769895	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTGTGCCGGGCTCAGT	65522187	True	NA	14	True	AATAAA	-13	NA	65525076	65538704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65525265_65525573_65525715_65525920_65526044_65526123_65526351_65526782_65526874_65526961_65527118_65530628_65530788_65531575_65531684_65532691_65532806_65535226_65535383_65535952_65536142_65536258_65536335_65536585_65536751_65536985_65537129_65537811_65537881_65537966_65538183_65538441
transcript_25429.known	chr11	-	614	1	FSM	ENSG00000260233.3	ENST00000567594.1	614	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGACCTTGGTGCTTTTT	-65570071	False	NA	NA	False	NA	NA	NA	65570273	65569659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65569700_65570300
transcript_25431.nic	chr11	-	906	3	ISM	ENSG00000173338.13	ENST00000394217.6	1372	4	2045	0	-432	0	3prime_fragment	FALSE	canonical	1	1	junction_1	2.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCGGCTATTTTCAACTAT	-65593880	False	NA	NA	False	CATAAA	-12	NA	65593951	65592854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65593211_65593309_65593384_65593475
transcript_25432.nic	chr11	-	851	2	ISM	ENSG00000173338.13	ENST00000340313.5	1121	3	1849	0	-432	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAATGGGACTTCCCTG	-65593880	False	NA	NA	False	CATAAA	-31	NA	65593951	65592835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_65593211_65593475
transcript_25433.known	chr11	-	356	2	FSM	ENSG00000173338.13	ENST00000530380.1	356	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGCAACGACTTCGGCTA	-65593430	False	NA	NA	False	CATAAA	-1	NA	65593501	65592865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65593196_65593475
transcript_25434.known	chr11	-	1121	3	FSM	ENSG00000173338.13	ENST00000340313.5	1121	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGAATGGGACTTCCCTG	NA	False	NA	NA	False	CATAAA	-31	NA	65595800	65592835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65593211_65593475_65593875_65595453
transcript_25439.known	chr11	-	2681	11	FSM	ENSG00000173039.20	ENST00000308639.13	2681	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	29.1288516766453	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGAGATCCGCTTTTTTT	-65663074	False	NA	-24	True	AATAAA	-16	NA	65663090	65653601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659789_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_2544.known	chr1	+	2131	11	FSM	ENSG00000162551.14	ENST00000540617.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	225.08018571167	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGTCCCAGGAAGC	21498929	True	NA	NA	False	NA	NA	NA	21509427	21578175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_21509518_21560625_21560746_21561096_21561213_21563109_21563285_21564040_21564217_21568103_21568248_21570304_21570375_21573664_21573800_21575732_21575925_21576521_21576642_21577382
transcript_25442.known	chr11	-	3183	10	FSM	ENSG00000173039.20	ENST00000525693.5	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	7.55392139190379	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGATCCGCTTTTTTTC	-65660584	True	NA	-23	True	AATAAA	-17	NA	65662895	65653600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_25444.known	chr11	+	824	5	FSM	ENSG00000285533.3	ENST00000648185.2	909	5	83	2	8	-2	multi-exon	FALSE	canonical	2	10	junction_1	8.57321409974112	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662831	True	NA	10	True	AATAAA	-17	NA	65663085	65671716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130_65666218_65671422
transcript_25445.nnic	chr11	+	898	5	NNC	ENSG00000285533.3	novel	909	5	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.2805141726785	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662732	True	NA	10	True	AATAAA	-17	NA	65662986	65671716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65663149_65663426_65663684_65665445_65665544_65666130_65666218_65671422
transcript_25446.known	chr11	+	1697	4	FSM	ENSG00000285533.3	ENST00000654110.1	1697	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.89949493661167	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGGGTTTCCATATT	65662751	True	NA	NA	False	NA	NA	NA	65663005	65667304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663149_65663426_65663684_65665420_65665544_65666130
transcript_25447.nnic	chr11	+	838	4	NIC	ENSG00000285533.3	novel	909	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	2.82842712474619	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	65662732	True	NA	12	True	AATAAA	-19	NA	65662986	65671718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65663426_65663684_65665420_65665544_65671422
transcript_25451.nnic	chr11	+	665	4	NIC	ENSG00000285533.3	novel	909	5	NA	NA	-13	-2	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	9.0921211313239	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662733	True	NA	10	True	AATAAA	-17	NA	65662987	65671716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65665420_65665544_65666130_65666218_65671422
transcript_25452.nnic	chr11	+	634	4	NNC	ENSG00000285533.3	novel	2628	4	NA	NA	-7	-2	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	10.2306728354819	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662739	True	NA	10	True	AATAAA	-17	NA	65662993	65671716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65663149_65665445_65665544_65666130_65666218_65671422
transcript_25453.nnic	chr11	+	576	4	NNC	ENSG00000285533.3	novel	2628	4	NA	NA	1	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	12.2565175405668	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662747	True	NA	10	True	AATAAA	-17	NA	65663001	65671716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65663149_65665495_65665544_65666130_65666218_65671422
transcript_25458.nnic	chr11	+	715	3	FSM	ENSG00000285533.3	ENST00000689251.1	630	3	-85	0	-14	0	multi-exon	FALSE	canonical	1	2	junction_2	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	65662732	True	NA	12	True	AATAAA	-19	NA	65662986	65671718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663149_65663426_65663684_65671422
transcript_25459.nnic	chr11	+	515	3	NIC	ENSG00000285533.3	novel	960	3	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	11	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTCCCACCAACGCC	65662733	True	NA	NA	False	AATAAA	-13	NA	65662987	65666361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65665420_65665544_65666130
transcript_25460.nnic	chr11	+	580	3	NIC	ENSG00000285533.3	novel	909	5	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	65662733	True	NA	12	True	AATAAA	-19	NA	65662987	65671718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65665420_65665544_65671422
transcript_25463.nnic	chr11	+	524	3	NIC	ENSG00000285533.3	novel	2628	4	NA	NA	0	-2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTGTTTGGTTCTGTTCT	65662751	True	NA	10	True	AATAAA	-17	NA	65663005	65671716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_65663149_65666130_65666218_65671422
transcript_25466.nic	chr11	+	813	3	FSM	ENSG00000285533.3	ENST00000690559.1	960	3	147	0	-44	0	multi-exon	FALSE	canonical	3	10	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTCTCCCACCAACGCC	65662970	False	NA	NA	False	AATAAA	-13	NA	65663224	65666361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663684_65665420_65665544_65666130
transcript_25469.nnic	chr11	+	768	2	FSM	ENSG00000285533.3	ENST00000692111.1	711	2	-57	0	-57	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTGGTTCTGTTCTGG	65662957	False	NA	12	True	AATAAA	-19	NA	65663211	65671718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663684_65671422
transcript_25470.known	chr11	+	2628	4	FSM	ENSG00000285533.3	ENST00000654031.1	2628	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	8.73053390247253	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTATATCTGTATCTGTT	65662752	True	NA	-2	True	AATAAA	-5	NA	65663006	65671704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65663149_65663426_65665544_65666130_65666218_65671422
transcript_25471.known	chr11	-	2266	12	FSM	ENSG00000173039.20	ENST00000612991.4	2266	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	28.2564992889444	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGATCCGCTTTTTTTCAG	-65660661	True	NA	-21	True	AATAAA	-19	NA	65662972	65653598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65654510_65654818_65655001_65655687_65655763_65655854_65655936_65658286_65658500_65658717_65658823_65659665_65659798_65660123_65660216_65661686_65661836_65661936_65662089_65662178_65662206_65662825
transcript_25474.known	chr11	+	2237	14	FSM	ENSG00000172977.13	ENST00000377046.7	2237	14	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_5	98.7564693409317	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711985	False	NA	23	True	AATAAA	-17	NA	65711995	65719604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_25479.known	chr11	+	2059	13	FSM	ENSG00000172977.13	ENST00000352980.8	2059	13	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	58.0896696687305	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65711879	True	NA	23	True	AATAAA	-17	NA	65712017	65719604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712280_65712378_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_25485.known	chr11	+	2080	13	FSM	ENSG00000172977.13	ENST00000341318.9	2080	13	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	97.2358244452915	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCATGCAAAGTTCTTGG	65708642	True	NA	23	True	AATAAA	-17	NA	65712251	65719604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713347_65713504_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_25489.known	chr11	+	1697	12	FSM	ENSG00000172977.13	ENST00000530446.5	1697	12	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	42.1486938907271	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAACTCCAAGGTCAGCTG	65708629	True	NA	NA	False	NA	NA	NA	65712238	65719364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_25499.known	chr11	+	745	7	FSM	ENSG00000172977.13	ENST00000527544.5	745	7	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_3	54.3834125037732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGTGAATCAAATGACAGC	65708814	False	NA	NA	False	NA	NA	NA	65712423	65714938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712446_65712765_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820
transcript_255.known	SIRV3	+	2373	3	FSM	SIRV3A	SIRV306	2373	3	0	0	0	0	multi-exon	FALSE	canonical	3	864	junction_2	1416.5	1308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTACCTAACAGTAAAAGAGT	NA	False	NA	NA	False	NA	NA	NA	1944	8292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_2006_4003_4081_6057
transcript_25504.known	chr11	-	2645	4	FSM	ENSG00000172922.11	ENST00000308418.10	2645	4	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_3	60.9061208381847	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGATCAGGTAAAGCCTC	-65714317	True	NA	-12	True	AATAAA	-21	NA	65720798	65717672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65719810_65720044_65720165_65720241_65720418_65720586
transcript_25505.known	chr11	-	1750	5	FSM	ENSG00000172922.11	ENST00000644142.1	1750	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	164.840074011146	2168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGCATCATTTAACCAATA	-65714322	True	NA	-54	True	NA	NA	NA	65720803	65717714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65718823_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_25506.known	chr11	-	2798	3	FSM	ENSG00000172922.11	ENST00000528220.2	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	34	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714337	True	NA	-48	True	NA	NA	NA	65720818	65717708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65719810_65720044_65720165_65720241
transcript_25507.known	chr11	-	835	3	FSM	ENSG00000172922.11	ENST00000527610.1	835	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	74.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGATTCCATCACCCCAATAA	-65714320	True	NA	-43	True	AGTAAA	-16	NA	65720801	65719720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65720165_65720241_65720418_65720586
transcript_25508.known	chr11	+	1875	11	FSM	ENSG00000172977.13	ENST00000534650.5	1875	11	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	43.0854963996006	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCATGCAAAGTTCTTG	65712579	True	NA	22	True	AATAAA	-16	NA	65712619	65719603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65712835_65712921_65713059_65713592_65713668_65713773_65713849_65714494_65714744_65714820_65714911_65716666_65716808_65716888_65716983_65718589_65718750_65718872_65718955_65719046
transcript_25509.known	chr11	-	2085	5	FSM	ENSG00000172922.11	ENST00000531596.6	2085	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	166.071332565256	1904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATTTAACCAATAAAATTT	-65714317	True	NA	-48	True	NA	NA	NA	65720798	65717708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65719157_65719680_65719810_65720044_65720165_65720241_65720418_65720586
transcript_25510.known	chr11	+	2988	4	FSM	ENSG00000172818.10	ENST00000335987.8	2988	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	1.69967317119759	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGTGTTTCCGATG	65786514	True	NA	22	True	ATTAAA	-14	NA	65787062	65797214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65787474_65794030_65794249_65794537_65794728_65795045
transcript_25511.known	chr11	+	2364	16	FSM	ENSG00000172732.12	ENST00000308110.9	2364	16	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	20.7520815555666	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAACAGTCCAGTTGCCTCG	65859370	True	NA	28	True	AATAAA	-39	NA	65860432	65866439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65860889_65860972_65861103_65861349_65861436_65861946_65862046_65862210_65862280_65862443_65862530_65863064_65863206_65863409_65863503_65863599_65863722_65863803_65863902_65864496_65864614_65864719_65864816_65865016_65865146_65865219_65865324_65865810_65865895_65865985
transcript_25517.known	chr11	+	1681	13	FSM	ENSG00000172803.18	ENST00000308342.7	1681	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	3.94669341207154	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGCCTGTTGTCCTTACT	65833828	True	NA	8	True	AATAAA	-20	NA	65833962	65853701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65834102_65849477_65849583_65849919_65850031_65850149_65850272_65850430_65850555_65850750_65850856_65851054_65851161_65851327_65851404_65851639_65851680_65852464_65852552_65852629_65852790_65852872_65852959_65853281
transcript_25520.known	chr11	-	1813	12	FSM	ENSG00000172638.13	ENST00000531972.5	1813	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	18.4094837219595	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-65872302	True	NA	0	True	TATAAA	-21	NA	65872811	65866440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65866713_65866844_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_25521.known	chr11	-	1934	11	FSM	ENSG00000172638.13	ENST00000307998.11	1934	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	5.27636238330917	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTTCAATCTTTTCTT	-65872291	True	NA	0	True	TATAAA	-21	NA	65872800	65866440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65867080_65867860_65868057_65868294_65868422_65868509_65868630_65869856_65869977_65870120_65870238_65870535_65870659_65871156_65871364_65871969_65872019_65872243_65872362_65872682
transcript_2553.known	chr1	-	4419	27	FSM	ENSG00000090686.16	ENST00000308271.14	4419	27	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_21	30.6594435580612	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAAGTTTTCTCT	-21769724	True	NA	NA	False	NA	NA	NA	21783149	21678297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21679440_21680807_21680835_21687190_21687240_21689973_21690100_21695065_21695222_21701497_21701603_21703511_21703619_21704261_21704393_21705726_21705838_21706125_21706188_21706466_21706590_21706743_21706869_21715388_21715458_21721035_21721167_21721649_21721765_21723897_21724096_21728569_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_2555.known	chr1	-	2818	11	FSM	ENSG00000090686.16	ENST00000421625.6	2818	11	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_5	28.1291663580704	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTACTTGTGGTTTGTCTT	-21783545	True	NA	-5	True	AATAAA	-14	NA	21783606	21727850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_21728720_21729703_21729833_21736445_21736626_21747066_21747150_21748137_21748272_21751506_21751616_21752526_21752652_21752991_21753120_21756545_21756703_21757662_21757784_21782823
transcript_25566.known	chr11	-	962	4	FSM	ENSG00000172757.13	ENST00000527344.5	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4962.75140980843	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGTGCTTGTCTGTTTA	-65856997	False	208980	-65	True	NA	NA	NA	65857033	65854974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856930
transcript_25568.known	chr11	-	1062	4	FSM	ENSG00000172757.13	ENST00000531407.5	1062	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_3	4898.16952204256	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCCATGCTGCCAACTTC	-65857832	False	NA	-99	True	NA	NA	NA	65857868	65855008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65857631
transcript_256.known	SIRV3	+	436	3	FSM	SIRV3A	SIRV305	436	3	0	0	0	0	multi-exon	FALSE	canonical	3	1806	junction_2	921.5	11931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATCTTAATAGACGATT	NA	False	NA	NA	False	NA	NA	NA	4003	6718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV3_+_4081_4568_4780_6570
transcript_2560.known	chr1	+	2256	7	FSM	ENSG00000070831.17	ENST00000344548.7	2256	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	248.737981284189	2819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCCTGAGGGTTGTTAT	22009300	True	NA	16	True	ATTAAA	-21	NA	22052667	22092946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22052743_22074093_22074220_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22091427
transcript_25600.known	chr11	-	1245	4	FSM	ENSG00000172757.13	ENST00000308162.10	1245	4	0	0	0	0	multi-exon	FALSE	canonical	3	10523	junction_1	20.1714870272097	14093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGCTGAGACGCCTTT	-65649200	True	NA	-35	True	NA	NA	NA	65858180	65854672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65858096
transcript_25601.known	chr11	-	1509	2	FSM	ENSG00000172757.13	ENST00000530945.1	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	10553	junction_1	0	2177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGACAATAATAAAA	-65649214	True	NA	-46	True	ATTAAA	-3	NA	65858194	65854831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65856243_65858096
transcript_25602.known	chr11	-	860	4	FSM	ENSG00000172757.13	ENST00000524553.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4972.17942377608	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTTTTTTTAACAACAT	-65856928	False	208980	-144	True	NA	NA	NA	65856964	65855053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65855449_65855653_65855731_65855934_65856243_65856884
transcript_25603.known	chr11	-	674	4	FSM	ENSG00000172638.13	ENST00000531645.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	32.9983164553722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTAGTGGTTTTCAATCT	-65868066	False	NA	-6	True	TATAAA	-15	NA	65868416	65866446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65866713_65866844_65866935_65867860_65868057_65868294
transcript_25608.known	chr11	-	1261	10	FSM	ENSG00000172500.13	ENST00000338369.6	1261	10	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	244.310367269904	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTCCTCGCTCCGGGG	NA	False	NA	-23	True	AATAAA	-18	NA	65888531	65883920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885508_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_25611.known	chr11	-	1361	10	FSM	ENSG00000172500.13	ENST00000357519.9	1361	10	0	0	0	0	multi-exon	FALSE	canonical	3	805	junction_5	51.492777870683	2724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTCTTGTCTTGGTTTAT	-65880668	True	NA	-1	True	NA	NA	NA	65888471	65883739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888333
transcript_25630.known	chr11	-	1010	9	FSM	ENSG00000172500.13	ENST00000533037.5	1010	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	298.690789111415	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGCGGCTGCCTCCTGCGC	-65880687	True	NA	-111	True	NA	NA	NA	65888490	65884008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65884044_65884391_65884490_65884569_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65887599_65887727_65887933_65888133_65888333
transcript_2565.known	chr1	+	338	3	FSM	ENSG00000218510.9	ENST00000642072.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACTACCCAATGAAATGAT	22024247	True	NA	NA	False	AATACA	-25	NA	22025521	22030374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025644_22027413_22027535_22030279
transcript_25659.known	chr11	-	1173	10	FSM	ENSG00000172500.13	ENST00000533045.5	1173	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	384.173507611622	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACAATAAAGTTGCTCTGA	-65880711	True	NA	-50	True	NA	NA	NA	65888514	65883947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65884044_65884391_65884509_65884602_65884657_65884934_65884999_65885077_65885187_65885529_65885664_65886321_65886423_65887599_65887727_65887933_65888133_65888342
transcript_2566.known	chr1	+	771	3	FSM	ENSG00000218510.9	ENST00000420503.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTGGATGCAAGATCCA	22024236	True	NA	NA	False	NA	NA	NA	22025510	22030800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025640_22027413_22027535_22030279
transcript_25660.known	chr11	-	1559	2	FSM	ENSG00000175573.7	ENST00000449692.3	1559	2	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65918216_65918909
transcript_25661.known	chr11	-	1562	2	FSM	ENSG00000175573.7	ENST00000438576.3	1562	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCTTGGTGGTTACCT	-65917676	True	NA	-5	True	AATAAA	-38	NA	65919062	65916809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65918219_65918909
transcript_25662.known	chr11	+	822	7	FSM	ENSG00000175550.8	ENST00000312515.7	822	7	0	0	0	0	multi-exon	TRUE	canonical	3	1418	junction_6	206.603014391261	5614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCTGCGCAGGACGTCAT	65906492	True	NA	30	True	AATAAA	-24	NA	65919425	65921563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65919544_65919779_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_25663.known	chr11	+	751	6	FSM	ENSG00000175550.8	ENST00000532933.1	751	6	0	0	0	0	multi-exon	FALSE	canonical	3	1418	junction_5	223.170248913246	826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCCAGGCTCTGCGCA	65919534	True	NA	21	True	AATAAA	-15	NA	65919723	65921554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65919853_65919947_65920042_65920342_65920463_65920568_65920663_65920883_65920973_65921329
transcript_25665.known	chr11	+	1925	8	FSM	ENSG00000175513.9	ENST00000532620.5	1925	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	8.48046975980333	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	14	True	ATTAAA	-12	NA	65945444	65959963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65945823_65946879_65947017_65947109_65947829_65948000_65948149_65953566_65953738_65958882_65958983_65959189_65959315_65959816
transcript_2567.known	chr1	+	1518	3	FSM	ENSG00000218510.9	ENST00000634934.2	1518	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024218	True	NA	NA	False	AATAAA	-1	NA	22025492	22031223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025946_22027413_22027535_22030279
transcript_25673.known	chr11	+	722	5	FSM	ENSG00000175513.9	ENST00000534740.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.7121426428143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	14	True	ATTAAA	-12	NA	65945643	65959963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_65945823_65953566_65953738_65958882_65958983_65959189_65959315_65959816
transcript_25677.nnic	chr11	+	605	4	NNC	ENSG00000175513.9	novel	1925	8	NA	NA	12848	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.8977121983832	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAGTATGAGATTTCT	NA	False	NA	14	True	ATTAAA	-12	NA	65958538	65959963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_65958772_65958882_65958983_65959189_65959315_65959816
transcript_25685.nic	chr11	-	1258	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-310	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_5	42.9213233719558	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66002475	False	NA	-9	True	ATTAAA	-16	NA	66002486	65998432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_25686.known	chr11	-	808	6	FSM	ENSG00000175376.9	ENST00000529964.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66000076	True	NA	-9	True	ATTAAA	-16	NA	66002166	65998432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66002039
transcript_25687.known	chr11	-	889	6	FSM	ENSG00000175376.9	ENST00000527249.5	889	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	38.0263066836631	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGCCCCTGGCTCTTCT	-66000086	True	NA	NA	False	NA	NA	NA	66002176	65998566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66001909
transcript_25688.known	chr11	-	2761	6	FSM	ENSG00000175376.9	ENST00000526451.5	2761	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	47.8806850410476	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000066	True	NA	0	True	AATAAA	-19	NA	66002156	65996544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000482_66002039
transcript_25689.known	chr11	-	2916	6	FSM	ENSG00000175376.9	ENST00000533544.6	2916	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	43.3008083065432	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTGTGTGTATCTATC	-66000067	True	NA	0	True	AATAAA	-19	NA	66002157	65996544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66001909
transcript_2569.known	chr1	+	929	2	FSM	ENSG00000218510.9	ENST00000434233.2	929	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTTTTTTTTTTTTTT	22025166	True	NA	-3	True	NA	NA	NA	22025187	22031023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025373_22030279
transcript_25690.nic	chr11	-	1213	6	NIC	ENSG00000175376.9	novel	808	6	NA	NA	-296	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	47.8806850410476	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTTGTTCTGGTGTCTGA	-66002296	True	NA	-9	True	ATTAAA	-16	NA	66002472	65998432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_65998744_65999349_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66002039
transcript_25691.known	chr11	-	584	5	FSM	ENSG00000175376.9	ENST00000532707.5	584	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	47.4677522113698	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACAGGAACAGGTGAGGA	-66000046	True	NA	NA	False	NA	NA	NA	66002136	65999362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65999398_65999566_65999676_66000052_66000162_66000302_66000407_66001909
transcript_25692.known	chr11	-	580	5	FSM	ENSG00000175376.9	ENST00000530462.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	52.8535713079069	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGGAACAGGTGAGGAACA	-66000070	True	NA	NA	False	NA	NA	NA	66002160	65999359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_65999398_65999566_65999676_66000052_66000162_66000302_66000506_66002039
transcript_2570.known	chr1	+	1077	2	FSM	ENSG00000218510.9	ENST00000416769.2	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024236	True	NA	NA	False	AATAAA	-1	NA	22025510	22031223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025644_22030279
transcript_25705.known	chr11	+	1135	3	FSM	ENSG00000175334.8	ENST00000533166.5	1135	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	1970	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCAGTGGCTTTCATGACT	66002519	False	NA	11	True	NA	NA	NA	66002580	66004131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66003071_66003234_66003374_66003625
transcript_25706.known	chr11	+	670	3	FSM	ENSG00000175334.8	ENST00000527348.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	2	293	junction_1	1840.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTGGGAGTTTTCTCCC	66001940	True	NA	NA	False	NA	NA	NA	66002781	66003898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66003040_66003234_66003374_66003625
transcript_25708.known	chr11	+	251	2	FSM	ENSG00000175334.8	ENST00000524663.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	3	817	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGGGAATGGCTGAAAGACA	66002209	False	NA	NA	False	AAGAAA	-15	NA	66002315	66003678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002514_66003625
transcript_25709.known	chr11	+	612	2	FSM	ENSG00000175334.8	ENST00000524628.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	0	880	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	65969603	True	NA	26	True	AATAAA	-15	NA	66002479	66004146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002571_66003625
transcript_2571.known	chr1	+	1388	2	FSM	ENSG00000218510.9	ENST00000634712.2	1388	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATATGTGCTGTGGTGAT	22024223	True	NA	NA	False	ATTAAA	-14	NA	22025497	22031219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025946_22030279
transcript_25710.known	chr11	+	731	3	FSM	ENSG00000175334.8	ENST00000312175.7	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	2816	junction_1	579	25195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGCTTTGTGCACTGAAA	65969626	True	NA	29	True	AATAAA	-18	NA	66002502	66004149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002571_66003234_66003374_66003625
transcript_25711.known	chr11	+	946	3	FSM	ENSG00000175334.8	ENST00000445560.6	946	3	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	1596.5	4041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGGCTTTGTGCACTG	NA	False	NA	26	True	AATAAA	-15	NA	66002227	66004146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66002514_66003234_66003374_66003625
transcript_25712.known	chr11	+	592	3	FSM	ENSG00000175315.3	ENST00000312134.3	592	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTCTTCCAAGTGCTT	66011962	True	NA	12	True	AATAAA	-22	NA	66012007	66013505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66012285_66012825_66012952_66013316
transcript_25713.known	chr11	-	3301	3	FSM	ENSG00000175229.7	ENST00000312006.5	3301	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAGTGATCTATCCAAA	-66045721	True	NA	-3	True	AGTAAA	-14	NA	66049161	66040764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66043678_66045290_66045528_66049010
transcript_25714.known	chr11	-	678	2	FSM	ENSG00000175229.7	ENST00000527048.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTTCTCCGAGCCCCCGT	-66045711	True	NA	NA	False	NA	NA	NA	66049151	66044990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66045528_66049010
transcript_25716.known	chr11	+	3272	22	FSM	ENSG00000087365.16	ENST00000322535.11	3272	22	0	0	0	0	multi-exon	FALSE	canonical	3	1647	junction_4	218.725632915603	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCCTTGGGTTCAA	66020452	True	NA	NA	False	NA	NA	NA	66052363	66069308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_25719.nic	chr11	+	3016	22	NIC	ENSG00000087365.16	novel	3272	22	NA	NA	-144	0	combination_of_known_junctions	TRUE	canonical	3	329	junction_4	412.128675720914	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	NA	False	NA	24	True	AATAAA	-4	NA	66052186	66068878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055537_66055586_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_2572.known	chr1	+	1435	6	FSM	ENSG00000070831.17	ENST00000315554.13	1435	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	213.251400933265	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTGATGAAGCTTTATTC	22009341	True	NA	NA	False	ATTAAA	-23	NA	22052708	22090807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22052743_22078428_22078584_22081721_22081795_22086438_22086549_22086668_22086867_22089942
transcript_25724.known	chr11	+	3254	21	FSM	ENSG00000087365.16	ENST00000528302.5	3254	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	485.236581473409	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAACCCTTGGGTTCAA	66020419	True	NA	NA	False	NA	NA	NA	66052330	66069308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66056837_66056956_66057265_66057376_66058053_66058151_66058313_66058406_66058829_66059046_66059200_66059339_66059514_66059596_66059781_66060010_66060581_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067945_66068046_66068147_66068334_66068673
transcript_2573.known	chr1	+	1189	3	FSM	ENSG00000218510.9	ENST00000404210.5	1189	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCTGTGGTGATTAAT	22024257	True	NA	NA	False	AATAAA	-1	NA	22025531	22031223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_22025644_22028527_22028661_22030279
transcript_25740.known	chr11	+	1163	10	FSM	ENSG00000087365.16	ENST00000530322.5	1163	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	563.002861646566	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTACAAGGAGAGCACACTA	66020488	False	NA	NA	False	NA	NA	NA	66052399	66059044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055534_66055586_66056837_66056956_66057268_66057376_66058053_66058151_66058313_66058406_66058829
transcript_25741.known	chr11	+	1081	10	FSM	ENSG00000087365.16	ENST00000533595.5	1081	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	707.632481161699	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCGTGGCTCTGATTCCC	66020453	True	NA	97	True	NA	NA	NA	66052364	66058930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66052518_66052672_66052720_66053026_66053105_66055075_66055316_66055537_66055586_66056837_66056956_66057268_66057376_66058053_66058151_66058313_66058406_66058829
transcript_25749.known	chr11	+	1080	9	FSM	ENSG00000087365.16	ENST00000530981.1	1080	9	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	708.964462702469	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTCCCAAGGAAAGAGATG	66060614	True	NA	24	True	AATAAA	-4	NA	66060690	66068878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66060732_66061685_66061776_66061890_66061999_66063008_66063117_66063399_66063543_66063627_66063730_66067948_66068046_66068147_66068334_66068673
transcript_2575.known	chr1	-	1190	4	FSM	ENSG00000169641.14	ENST00000471849.5	1190	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	29.6797723860694	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATCAGAAAATGAAAAGAA	-23163217	True	NA	NA	False	AAGAAA	-2	NA	23168845	23093442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23094381_23109021_23109128_23109584_23109651_23168765
transcript_25755.nnic	chr11	-	609	3	NNC	ENSG00000255320.2	novel	1001	3	NA	NA	-36	-1	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCCTGGTGGATTTTCAC	-66257553	False	NA	1	True	NA	NA	NA	66257631	66244840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_66245113_66246175_66246374_66257492
transcript_25759.known	chr11	-	1097	8	FSM	ENSG00000174851.16	ENST00000376901.9	1097	8	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_3	125.100775703561	7632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-66275628	True	NA	-4	True	NA	NA	NA	66289143	66284579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66284784_66284872_66284967_66285380_66285537_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_25765.known	chr11	-	943	7	FSM	ENSG00000174851.16	ENST00000359461.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	452.561843533259	3961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGACCCTTGTTCC	-66275630	True	NA	-4	True	NA	NA	NA	66289145	66284579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66284784_66284872_66284967_66285700_66285759_66287597_66287677_66287811_66287917_66288080_66288293_66288954
transcript_25774.known	chr11	+	1901	6	FSM	ENSG00000174903.16	ENST00000311481.11	1901	6	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_5	66.5714653586655	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGGTGGCCAAGTGTGG	66259224	True	NA	32	True	AATAAA	-43	NA	66268638	66277492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66272364_66272461_66275803_66275936_66276043
transcript_25783.known	chr11	+	991	5	FSM	ENSG00000174903.16	ENST00000527397.1	991	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	427.416292974426	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTACTGCCCTGGCTG	66259175	True	NA	NA	False	NA	NA	NA	66268589	66276629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66268694_66271796_66271870_66272156_66272253_66275803_66275936_66276043
transcript_25798.known	chr11	-	1363	10	FSM	ENSG00000174744.14	ENST00000425825.6	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	111.641732981936	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGCCCTGTGTGTGTGTGT	-66341233	True	NA	-5	True	ATTAAA	-20	NA	66345119	66337332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337808_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_25800.known	chr11	-	1424	10	FSM	ENSG00000174744.14	ENST00000359957.8	1424	10	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	23.7897166289124	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	-66341218	True	NA	-11	True	ATTAAA	-14	NA	66345104	66337338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337890_66338242_66338283_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_25809.known	chr11	-	1817	9	FSM	ENSG00000174744.14	ENST00000530238.5	1817	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	25.219040425837	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGGACTGGAATTAAAACC	-66341203	True	NA	-41	True	NA	NA	NA	66345089	66337368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337890_66338242_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095_66342242_66344971
transcript_25810.known	chr11	-	913	9	FSM	ENSG00000174744.14	ENST00000527375.5	913	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_5	157.992879586391	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCAGGCTCCTGTGG	-66341193	True	NA	NA	False	NA	NA	NA	66345079	66337777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341212_66341334_66341532_66341624_66342095_66342242_66344971
transcript_2582.nic	chr1	-	928	3	ISM	ENSG00000169641.14	ENST00000302291.8	8898	5	8948	9624	-15	-211	internal_fragment	FALSE	canonical	3	57	junction_2	17.5	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAAGAAAATGAGAAAT	-23163232	False	NA	18	True	AATGAA	-3	NA	23168860	23093653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_23094381_23109021_23109128_23168765
transcript_25823.known	chr11	-	1131	8	FSM	ENSG00000174744.14	ENST00000524699.5	1131	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	130.296835364956	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGTGCCCTGTGTGT	-66342080	False	NA	-11	True	ATTAAA	-14	NA	66342121	66337338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66337890_66338720_66338786_66340120_66340214_66340773_66340871_66340966_66341047_66341205_66341334_66341532_66341624_66342095
transcript_25824.known	chr11	-	2007	2	FSM	ENSG00000174684.7	ENST00000311181.5	2007	2	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	0	955	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGGCTCCGTTACTCTC	-66345605	True	NA	-2	True	AATAAA	-17	NA	66347629	66345373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66346241_66346489
transcript_25825.known	chr11	-	2474	12	FSM	ENSG00000174669.12	ENST00000540386.5	2474	12	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	55.2695872313814	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGCGTTCACCAAGTCT	-66371748	False	NA	-35	True	NA	NA	NA	66371820	66362521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366192_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_25826.known	chr11	-	2455	12	FSM	ENSG00000174669.12	ENST00000357440.7	2455	12	0	0	0	0	multi-exon	TRUE	canonical	3	101	junction_9	39.0123947246098	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCGTTCACCAAGTCTT	-66367746	True	NA	-34	True	NA	NA	NA	66371760	66362520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369200_66369368_66369533_66371243_66371326_66371562
transcript_25842.known	chr11	+	286	2	FSM	ENSG00000255468.7	ENST00000581155.5	286	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTGTGTGTGCTGACT	66347923	False	NA	NA	False	NA	NA	NA	66347949	66353619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66348071_66353454
transcript_25843.known	chr11	-	2272	12	FSM	ENSG00000174669.12	ENST00000541567.5	2272	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	59.3639844066089	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGCGTTCACCAAGTC	-66367633	True	NA	-36	True	NA	NA	NA	66371647	66362522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66363548_66364224_66364425_66365935_66366022_66366125_66366232_66366430_66366565_66367463_66367549_66367771_66367870_66368536_66368672_66369059_66369132_66369368_66369533_66371243_66371326_66371562
transcript_25846.known	chr11	+	3078	18	FSM	ENSG00000254986.8	ENST00000532677.5	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	60.0295198431168	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCGGCGTGTGTGGCT	66479914	True	NA	18	True	AATAAA	-19	NA	66480012	66509657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66480466_66482195_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_25847.known	chr11	+	2974	18	FSM	ENSG00000254986.8	ENST00000531863.6	2660	18	-421	107	0	-107	multi-exon	FALSE	canonical	3	105	junction_1	68.8065338492357	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGGTGGCACGTGACAG	66479914	True	NA	-89	True	NA	NA	NA	66480012	66509550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66480466_66482192_66482471_66485172_66485263_66486539_66486678_66487267_66487343_66487913_66488008_66491252_66491384_66491493_66491625_66491697_66491757_66492715_66492911_66493066_66493180_66493540_66493634_66495205_66495269_66495364_66495490_66495629_66495751_66497297_66497478_66504611_66504775_66509078
transcript_25853.known	chr11	+	3368	17	FSM	ENSG00000174483.20	ENST00000318312.12	3368	17	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_9	11.4221208078885	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTTTTTAATGGAGTTA	66508279	True	NA	7	True	ATTAAA	-15	NA	66510634	66533598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515587_66515692_66515732_66515860_66515934_66519616_66519749_66521269_66521377_66523455_66523577_66523723_66523883_66526122_66526193_66526648_66526808_66529818_66529953_66530893_66531029_66531655_66531743_66531950
transcript_25871.known	chr11	+	828	7	FSM	ENSG00000174483.20	ENST00000524907.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	8.84433277428107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTCTGGCCCTGGGCCCGC	66508314	True	NA	NA	False	NA	NA	NA	66510669	66519757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66510707_66511012_66511090_66511204_66511240_66514405_66514679_66515539_66515732_66515860_66515934_66519616
transcript_25887.nnic	chr11	-	898	5	NNC	ENSG00000174547.13	novel	922	6	NA	NA	-206	0	at_least_one_novel_splicesite	FALSE	canonical	3	57	junction_4	707.706992688358	421	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66439036	False	NA	-10	True	AATAAA	-13	NA	66439054	66435837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438781
transcript_25888.known	chr11	-	2209	5	FSM	ENSG00000174547.13	ENST00000524576.5	2209	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	728.260384409313	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCAGATGAGACTTCTGCC	NA	False	NA	-20	True	AATAAA	-20	NA	66466738	66435079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66465912
transcript_25889.known	chr11	-	828	4	FSM	ENSG00000255517.7	ENST00000527092.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.67241208569794	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTACCCCTTGCCTCACAG	-66479953	True	NA	NA	False	NA	NA	NA	66480231	66473489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66473868_66474143_66474226_66474929_66475105_66480038
transcript_2589.known	chr1	-	2691	11	FSM	ENSG00000125944.21	ENST00000374616.7	2691	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	538.40635211706	1919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATTTCAAATTCAATTGT	-23319147	True	NA	-14	True	AATAAA	-26	NA	23344310	23309782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318698_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_259.known	SIRV4	+	1567	3	FSM	SIRV4C	SIRV409	1567	3	0	0	0	0	multi-exon	FALSE	canonical	3	1031	junction_1	44.5	6986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTGTAACCTGTCAAG	NA	False	NA	NA	False	NA	NA	NA	1000	3403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_+_1347_1678_1886_2389
transcript_2590.known	chr1	-	2694	11	FSM	ENSG00000125944.21	ENST00000374612.5	2694	11	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_10	387.929323459828	2139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATTTCAAATTCAAT	-23319159	True	NA	-17	True	AATAAA	-23	NA	23344322	23309785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23318482_23318689_23321527_23321664_23323555_23323733_23333517_23333632_23337753_23337862_23338489_23338609_23340851_23341021_23344210
transcript_25909.known	chr11	-	944	2	FSM	ENSG00000255517.7	ENST00000527274.3	982	2	38	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGGTGTCTGGAGAGTGC	-66479953	True	NA	NA	False	ATTAAA	-24	NA	66480231	66477345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66478097_66480038
transcript_25910.known	chr11	-	567	2	FSM	ENSG00000255517.7	ENST00000525142.2	975	2	36	372	-2	-369	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGGGTACAGGTGGCC	-66479955	True	NA	NA	False	NA	NA	NA	66480233	66477719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66478092_66480038
transcript_25911.known	chr11	-	812	5	FSM	ENSG00000174547.13	ENST00000534488.5	812	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	725.091847630354	2900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66420319	True	NA	-10	True	AATAAA	-13	NA	66438826	66435837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437436_66438163_66438260_66438631
transcript_25912.known	chr11	-	1527	5	FSM	ENSG00000174547.13	ENST00000430466.6	1527	5	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_4	606.881938683299	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGACTTCTGCCAATAT	-66420341	True	NA	-15	True	AATAAA	-25	NA	66438848	66435074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66437103_66437264_66437349_66437444_66438163_66438260_66438709
transcript_25913.known	chr11	-	922	6	FSM	ENSG00000174547.13	ENST00000329819.4	922	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	790.278077641029	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACTGTCATCTTCTATCT	-66420327	True	NA	-10	True	AATAAA	-13	NA	66438834	66435837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66436113_66436815_66436910_66437103_66437264_66437349_66437444_66438163_66438260_66438631
transcript_25914.known	chr11	+	2882	21	FSM	ENSG00000248746.6	ENST00000513398.2	2882	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_12	21.6416265562457	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCTTTTAGTTCCTGAAG	66544779	True	NA	12	True	AATAAA	-25	NA	66546902	66563334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044_66554132_66554535_66554624_66555129_66555209_66555285_66555368_66556144_66556231_66557132_66557226_66557698_66557930_66558026_66558175_66559235_66559387_66559967_66560077_66560170_66560312_66560572_66560756_66561226_66561362_66561457_66561638_66562021_66562169_66562256_66562323_66562795_66562955_66563034
transcript_25916.nic	chr11	+	699	4	ISM	ENSG00000248746.6	ENST00000513398.2	2882	21	-30	9038	-30	-265	5prime_fragment	FALSE	canonical	3	80	junction_1	3.09120616516523	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAAGCTGG	66544749	True	NA	NA	False	NA	NA	NA	66546872	66554296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_66547085_66551238_66551354_66551527_66551648_66554044
transcript_25921.known	chr11	+	1214	8	FSM	ENSG00000173992.9	ENST00000530961.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	52.6358301183224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTTTTATTTTCGTTTGGG	66589818	True	NA	-1	True	NA	NA	NA	66593200	66605998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605153_66605417_66605488_66605593_66605701
transcript_25922.known	chr11	+	1066	8	FSM	ENSG00000173992.9	ENST00000533244.6	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	27.0735958423837	1594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTTTTGTGCTTGTC	66589802	True	NA	20	True	AATGAA	-21	NA	66593184	66606019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_25926.known	chr11	+	942	8	FSM	ENSG00000173992.9	ENST00000310190.8	942	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.4635885845022	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGGGACTTTGCCTGCC	66589858	True	NA	-80	True	NA	NA	NA	66593240	66605919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593609_66593715_66599115_66599254_66599458_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_25931.known	chr11	+	1196	7	FSM	ENSG00000173992.9	ENST00000530384.5	1196	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	15.0517625398342	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGGCCAGAGGGACTTT	66589770	True	NA	-87	True	NA	NA	NA	66593152	66605912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66593301_66593641_66593715_66599115_66599637_66600488_66600550_66605338_66605417_66605488_66605593_66605701
transcript_25965.known	chr11	-	1806	4	FSM	ENSG00000173914.12	ENST00000310046.9	1806	4	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	52.1045956599693	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTTTATGTTTGTCTT	-66675557	True	NA	-4	True	AATAAA	-18	NA	66677887	66664997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66665579_66668614_66669292_66676667_66677092_66677763
transcript_25969.known	chr11	+	1426	3	FSM	ENSG00000239306.5	ENST00000393979.3	1426	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	230	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTTGTCATTGTCTTGA	66615290	True	NA	23	True	AATAAA	-27	NA	66616625	66627343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66624213_66624325_66626460
transcript_25970.known	chr11	+	5367	3	FSM	ENSG00000239306.5	ENST00000310137.5	5367	3	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_2	24.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGCTGTGGTGGCATGCA	66615294	True	NA	NA	False	AAGAAA	-13	NA	66616629	66629934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66624213_66625679_66626460
transcript_25971.known	chr11	+	1566	3	FSM	ENSG00000248643.5	ENST00000412278.2	1566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	237	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATGTGTGCTTTGCGAGA	66615290	True	NA	21	True	AATAAA	-17	NA	66616625	66646469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66643449_66644141_66646026
transcript_25978.known	chr11	+	764	3	FSM	ENSG00000173933.21	ENST00000528039.5	764	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	104	2903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624634	True	NA	20	True	AATAAA	-16	NA	66638715	66646468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639838_66640124_66646026
transcript_25979.known	chr11	-	769	3	FSM	ENSG00000173914.12	ENST00000531969.5	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	96	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTGCTTTCCCTAGGAGT	-66675494	True	NA	NA	False	NA	NA	NA	66677824	66665294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66665579_66676667_66677092_66677763
transcript_25984.known	chr11	+	829	2	FSM	ENSG00000248643.5	ENST00000500635.2	829	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	2767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	66615334	True	NA	19	True	AATAAA	-15	NA	66616669	66646467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66646026
transcript_25985.known	chr11	+	372	2	FSM	ENSG00000239306.5	ENST00000409738.4	372	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGATTACCGCCGTTTA	66615379	False	NA	NA	False	NA	NA	NA	66616714	66626489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66617058_66626460
transcript_25987.known	chr11	-	1646	2	FSM	ENSG00000173914.12	ENST00000531036.2	1646	2	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAAAATAATGGGAGAA	-66675547	True	NA	34	True	ATTAAA	-15	NA	66677877	66675559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_66677092_66677763
transcript_2599.known	chr1	-	2099	8	FSM	ENSG00000125944.21	ENST00000675048.1	2099	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	647.892785285104	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCACACCTTTTTGAAATC	-23319167	True	NA	NA	False	TTTAAA	-10	NA	23344330	23309929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23311067_23311200_23311323_23313552_23313703_23323555_23323733_23337753_23337862_23338489_23338609_23340851_23341018_23344210
transcript_25992.known	chr11	+	921	3	FSM	ENSG00000173933.21	ENST00000398692.8	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_2	197	5989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624616	True	NA	20	True	AATAAA	-16	NA	66638697	66646468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66646026
transcript_25993.known	chr11	+	1548	2	FSM	ENSG00000173933.21	ENST00000483858.5	1548	2	0	0	0	0	multi-exon	FALSE	canonical	3	602	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATTTCCGTGACTCC	66624616	True	NA	17	True	AATAAA	-27	NA	66638697	66641192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699
transcript_25994.known	chr11	+	1607	4	FSM	ENSG00000173933.21	ENST00000310092.12	1607	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_3	60.1054628687498	3118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66624621	True	NA	20	True	AATAAA	-16	NA	66638702	66646468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66643449_66644141_66646026
transcript_25995.known	chr11	+	1763	4	FSM	ENSG00000173933.21	ENST00000408993.6	1763	4	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_1	184.083918061543	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTTTTTCAACTTAGGGT	66624590	True	NA	4	True	NA	NA	NA	66638671	66646452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638894_66639699_66640124_66643449_66644141_66646026
transcript_25996.known	chr11	+	654	3	FSM	ENSG00000173933.21	ENST00000506523.6	654	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	290	551	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATTTCACTGTTCATTC	66624636	True	NA	3	True	AATAAA	-18	NA	66638717	66649930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66649735
transcript_25997.known	chr11	+	3029	3	FSM	ENSG00000173933.21	ENST00000396053.9	3029	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	265	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAACTGAATTTGTTGTT	66624585	True	NA	NA	False	ATTAAA	-14	NA	66638666	66668374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638753_66639699_66640124_66665855
transcript_25998.known	chr11	+	1011	3	FSM	ENSG00000173933.21	ENST00000530235.1	1011	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	62	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCGGTGAAATAAATGGTTT	66624638	True	NA	-9	True	NA	NA	NA	66638719	66646439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638894_66639699_66640124_66646026
transcript_25999.known	chr11	+	757	2	FSM	ENSG00000173933.21	ENST00000532968.1	757	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGCTTTACCTTAGGCAAA	66624645	True	NA	NA	False	NA	NA	NA	66638726	66640289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66638894_66639699
transcript_26.known	ERCC-00059	+	509	1	FSM	ERCC-00059A	DQ668356	509	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	263	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00059_+_0_500
transcript_26000.known	chr11	+	2321	3	FSM	ENSG00000173933.21	ENST00000409406.1	2321	3	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	0.5	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTATGTGTGCTTTGCGA	66624853	False	NA	19	True	AATAAA	-15	NA	66638934	66646467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66640124_66643449_66644141_66646026
transcript_26001.known	chr11	+	943	3	FSM	ENSG00000173933.21	ENST00000515838.2	943	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	8	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTATGTGTGCTTTGCGAG	66643739	False	NA	20	True	AATAAA	-16	NA	66643749	66646468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66644141_66644633_66644744_66646026
transcript_26002.known	chr11	+	2135	17	FSM	ENSG00000173715.18	ENST00000525908.6	2135	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	53.5465626814644	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCGCGTCTGCTTCCGC	66742808	True	NA	32	True	AATAAA	-24	NA	66744735	66843328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66744920_66748378_66748518_66756352_66756506_66759042_66759097_66788159_66788270_66796280_66796365_66800640_66800697_66801030_66801103_66803997_66804191_66813864_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_26007.known	chr11	+	1666	14	FSM	ENSG00000173715.18	ENST00000527634.5	1666	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	44.0639664135524	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTGGTTTAATAAAGCTGC	66742843	True	NA	-6	True	NA	NA	NA	66744770	66843290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66744920_66759042_66759097_66796280_66796365_66800640_66800697_66801030_66801103_66803994_66804185_66813855_66814016_66816052_66816200_66821642_66821765_66822563_66822675_66828265_66828365_66838366_66838446_66842848_66843070_66843168
transcript_26010.known	chr11	+	1462	8	FSM	ENSG00000173653.8	ENST00000309657.8	1462	8	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_2	56.6038867923396	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATTTGGGATCTTGTGTG	66838580	True	NA	36	True	ATTAAA	-45	NA	66843440	66846552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_26011.known	chr11	+	1428	8	FSM	ENSG00000173653.8	ENST00000524849.5	1428	8	0	0	0	0	multi-exon	TRUE	canonical	3	107	junction_2	128.153288315683	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGCCTTTGGGAATCGG	66838590	True	NA	16	True	ATTAAA	-25	NA	66843450	66846532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843641_66843758_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_26012.known	chr11	+	1379	7	FSM	ENSG00000173653.8	ENST00000524506.5	1379	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	156.285707031136	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66838576	True	NA	12	True	ATTAAA	-21	NA	66843436	66846528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843641_66843758_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845859
transcript_26015.known	chr11	+	1270	7	FSM	ENSG00000173653.8	ENST00000525356.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	133.477838360281	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66843705	False	NA	12	True	ATTAAA	-21	NA	66843722	66846528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66843862_66843959_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_26016.nic	chr11	+	1299	7	ISM	ENSG00000173653.8	ENST00000309657.8	1462	8	257	24	-25	0	3prime_fragment	FALSE	canonical	3	339	junction_1	57.0253355000116	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCCTTGGGCCTTTGGGAA	66843680	True	NA	12	True	ATTAAA	-21	NA	66843697	66846528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_66843862_66843955_66844040_66844285_66844365_66844868_66845037_66845165_66845238_66845499_66845563_66845859
transcript_26032.known	chr11	+	2869	2	FSM	ENSG00000173621.9	ENST00000309602.5	2869	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTAGTCTCTGGTGTTGT	66856648	True	NA	19	True	AATAAA	-19	NA	66857063	66860475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66859094_66859636
transcript_26033.known	chr11	+	1168	2	FSM	ENSG00000173237.5	ENST00000683896.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATTTGCCTGGTGACTAAC	66975281	False	NA	NA	False	AATAAA	-20	NA	66975303	66977009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66975639_66976176
transcript_26034.known	chr11	+	1187	2	FSM	ENSG00000173237.5	ENST00000308963.4	1187	2	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAACGATTTGCCTGGTGA	66975254	False	NA	NA	False	AATAAA	-15	NA	66975276	66977004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_66975639_66976179
transcript_26036.nic	chr11	+	1326	3	ISM	ENSG00000173227.14	ENST00000393946.6	4534	11	6	39631	6	-21673	5prime_fragment	FALSE	canonical	3	9	junction_2	10	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGACTTTCTTTTCTTTT	67006460	True	NA	12	True	AATAAA	-16	NA	67006783	67011232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_67007456_67009878_67010123_67010822
transcript_26037.known	chr11	+	1104	5	FSM	ENSG00000173156.7	ENST00000308831.7	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	12.9034879005639	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATTGTGTCGTGCCTCTTT	67055423	True	NA	8	True	AAGAAA	-15	NA	67056846	67072017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67057035_67065895_67065984_67066737_67066848_67070424_67070560_67071434
transcript_26042.known	chr11	+	463	3	FSM	ENSG00000173120.15	ENST00000517637.2	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAGAAGAAGAAG	67238157	False	NA	NA	False	NA	NA	NA	67240300	67243816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67240370_67243008_67243093_67243506
transcript_26047.known	chr11	+	2128	15	FSM	ENSG00000172932.16	ENST00000511455.7	2128	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.1553097009506	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGCTCTGCTCACTGGG	67288434	True	NA	7	True	AATAAA	-16	NA	67289302	67302484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67289551_67290077_67290214_67290321_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_26049.known	chr11	+	2138	14	FSM	ENSG00000172932.16	ENST00000447274.7	2138	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	23.7887646893189	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTCTGCTCACTGGGC	67288533	True	NA	8	True	AATAAA	-17	NA	67289401	67302485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67289551_67290077_67290447_67291475_67291522_67291602_67291747_67291990_67292181_67299057_67299125_67299529_67299612_67299826_67299889_67299992_67300124_67300989_67301148_67301281_67301399_67301487_67301652_67301731_67301824_67302118
transcript_26050.known	chr11	+	2781	14	FSM	ENSG00000172830.13	ENST00000308127.9	2781	14	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_7	13.3292400028379	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67300974	True	NA	9	True	AATAAA	-14	NA	67303529	67312592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310065_67310340_67311590
transcript_26051.known	chr11	+	2587	14	FSM	ENSG00000172830.13	ENST00000532881.5	2587	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_12	24.8869633894045	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTATTTTCAATGTGA	67301070	False	NA	9	True	AATAAA	-14	NA	67303625	67312592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67303692_67304117_67304156_67304772_67305008_67306837_67306963_67307041_67307114_67307370_67307437_67307548_67307738_67307845_67307940_67308173_67308303_67308411_67308459_67309396_67309544_67309767_67309969_67310163_67310340_67311590
transcript_26052.nnic	chr11	-	345	2	Genic_Genomic	ENSG00000287851.1	novel	893	1	NA	NA	-344	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAACATGTGTGGTTATTT	-67317755	False	NA	NA	False	AATAAA	-30	NA	67317775	67316543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_-_67316767_67317653
transcript_26053.known	chr11	-	893	1	FSM	ENSG00000287851.1	ENST00000661765.1	893	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGGTTATTTTTTAA	-67317411	False	NA	NA	False	AATAAA	-35	NA	67317431	67316538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67316500_67317400
transcript_26054.known	chr11	+	2086	11	FSM	ENSG00000172613.8	ENST00000307980.7	2086	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_10	11.2338773359869	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	67390211	True	NA	NA	False	ATTAAA	-18	NA	67391985	67398410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67392079_67392160_67392232_67392653_67392783_67393495_67393611_67393690_67393791_67395715_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_26063.known	chr11	-	1389	7	FSM	ENSG00000172531.16	ENST00000312989.11	1389	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	1164.46832169116	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365092	True	NA	-12	True	AATAAA	-19	NA	67401793	67398182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401233_67401727
transcript_26065.known	chr11	-	1054	6	FSM	ENSG00000172531.16	ENST00000358239.8	1054	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	1208.34895622084	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAACATGGAGCCTTGGTG	-67365170	True	NA	-32	True	NA	NA	NA	67401871	67398430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401727
transcript_26075.known	chr11	-	899	4	FSM	ENSG00000175482.9	ENST00000530584.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	107.251521615728	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	-67349128	True	NA	-5	True	AATAAA	-18	NA	67353518	67351547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353293
transcript_26076.known	chr11	-	584	4	FSM	ENSG00000175482.9	ENST00000531239.2	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	92.6390846241477	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCGCAGCTGAAGC	-67349144	True	NA	NA	False	NA	NA	NA	67353534	67351808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353363
transcript_26078.known	chr11	-	1486	4	FSM	ENSG00000175482.9	ENST00000529704.5	1486	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	96.4100040913228	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGCTGGGCGCAGTGG	-67349189	True	NA	NA	False	AATAAA	-11	NA	67353579	67350776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67353538
transcript_26079.known	chr11	-	904	4	FSM	ENSG00000175482.9	ENST00000532830.5	904	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	111.493896195661	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	NA	False	NA	-5	True	AATAAA	-18	NA	67356972	67351547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690_67352803_67352987_67353078_67356742
transcript_26081.nnic	chr11	+	696	3	NNC	ENSG00000172613.8	novel	565	4	NA	NA	-46	-60306	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0.5	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCAGGAGGTGTGAAAATC	NA	False	NA	NA	False	AATAAA	-18	NA	67317824	67331128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_67318198_67321269_67321334_67330869
transcript_26086.known	chr11	-	714	3	FSM	ENSG00000175482.9	ENST00000539074.1	714	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	68.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCTCCCAGGGCAAGGG	-67349124	True	NA	-65	True	NA	NA	NA	67353514	67351607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352987_67353078_67353302
transcript_26090.known	chr11	-	860	2	FSM	ENSG00000175482.9	ENST00000533429.1	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACCTTCAGTCCTTTA	-67348688	False	4390	-5	True	AATAAA	-18	NA	67353078	67351547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67352020_67352690
transcript_26091.known	chr11	-	1421	7	FSM	ENSG00000172531.16	ENST00000376745.9	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	217.51430348881	2572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGGCCTCCGTCTCACA	-67365157	True	NA	-12	True	AATAAA	-19	NA	67401858	67398182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_26092.known	chr11	-	1677	6	FSM	ENSG00000172531.16	ENST00000679175.1	1677	6	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	233.504946414418	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAAAGCTGGATTCTCGC	-67401583	False	36701	-30	True	AATAAA	-1	NA	67401604	67398200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399164_67399560_67399666_67400688_67400920_67401067
transcript_26093.known	chr11	-	1483	6	FSM	ENSG00000172531.16	ENST00000526510.6	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	3014	junction_4	124.927178788284	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGTCAAAGCTGG	-67365162	True	NA	-38	True	NA	NA	NA	67401863	67398208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67399164_67399560_67399666_67400688_67400920_67401067_67401200_67401727
transcript_26094.known	chr11	-	1809	6	FSM	ENSG00000172531.16	ENST00000677343.1	1809	6	0	0	0	0	multi-exon	FALSE	canonical	3	2713	junction_2	232.120141306178	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCTGGATTCTCGCCATG	-67365162	True	NA	-26	True	AATAAA	-5	NA	67401863	67398196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67398646_67398721_67398857_67398939_67399666_67400688_67400920_67401067_67401200_67401727
transcript_26095.known	chr11	+	1624	6	FSM	ENSG00000172613.8	ENST00000535644.1	1624	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	8.68562030024339	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCAAGGCTCCATGTTCCC	67393895	False	NA	NA	False	ATTAAA	-18	NA	67395669	67398410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67395826_67395911_67396022_67396110_67396176_67396262_67396401_67397178_67397387_67397463
transcript_26096.known	chr11	+	1806	16	FSM	ENSG00000175634.15	ENST00000528964.5	1806	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	164.869591563218	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCGCCACGCCCCGCGCT	67422122	True	NA	-34	True	NA	NA	NA	67428503	67435344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432352_67432493_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_26101.known	chr11	+	1733	15	FSM	ENSG00000175634.15	ENST00000312629.10	1733	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	110.976739611028	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGACCTGGCTCTTTGT	67422112	True	NA	23	True	ATTAAA	-14	NA	67428493	67435401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67428624_67428981_67429023_67429119_67429241_67429526_67429596_67431367_67431516_67432599_67432658_67432736_67432838_67432951_67433043_67433125_67433217_67433339_67433448_67433994_67434058_67434197_67434276_67434376_67434485_67434581_67434695_67434988
transcript_2611.nic	chr1	+	771	3	FSM	ENSG00000249087.8	ENST00000518600.2	483	3	-288	0	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	NA	False	NA	7	True	AATAAA	-23	NA	23368934	23371783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369325_23371138_23371210_23371473
transcript_2612.nic	chr1	+	732	3	FSM	ENSG00000249087.8	ENST00000690463.1	706	3	-29	3	-14	0	multi-exon	FALSE	canonical	0	0	junction_1	2	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	NA	False	NA	7	True	AATAAA	-23	NA	23368934	23371783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369325_23371138_23371210_23371512
transcript_26123.known	chr11	-	1931	12	FSM	ENSG00000172725.14	ENST00000393893.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	144.944731558658	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGACCTGCTGCTGCAA	NA	False	NA	-2	True	AATAAA	-19	NA	67443821	67438047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403_67443466_67443752
transcript_26125.known	chr11	-	4411	11	FSM	ENSG00000172725.14	ENST00000341356.10	4411	11	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_5	26.2800304413827	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-67435435	True	NA	-2	True	AATAAA	-17	NA	67443476	67435509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67438502_67438670_67438950_67439785_67439844_67440117_67440264_67440334_67440440_67441124_67441245_67441332_67441515_67441732_67441863_67441965_67442089_67442427_67442631_67443403
transcript_2614.nic	chr1	+	941	3	FSM	ENSG00000249087.8	ENST00000689840.1	932	3	-9	0	5	0	multi-exon	FALSE	canonical	1	2	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	23368848	True	NA	7	True	AATAAA	-23	NA	23368953	23371783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369514_23371138_23371210_23371473
transcript_26142.known	chr11	-	907	2	FSM	ENSG00000213402.3	ENST00000326294.4	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTGTGGTCCTACAGAGA	-67437555	False	8041	-2	True	AATAAA	-17	NA	67437682	67435509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67436351_67437616
transcript_26147.known	chr11	+	1182	6	FSM	ENSG00000110711.11	ENST00000684006.1	1182	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	93.743053075948	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGTCTGCTGAGCTGC	67480740	True	NA	14	True	TATAAA	-18	NA	67483067	67491102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490458_67490798
transcript_2615.known	chr1	+	606	3	FSM	ENSG00000249087.8	ENST00000437367.4	898	3	286	6	12	0	multi-exon	FALSE	canonical	2	4	junction_2	3.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	23369144	False	NA	7	True	AATAAA	-23	NA	23369249	23371783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369514_23371138_23371210_23371512
transcript_26150.known	chr11	+	1225	6	FSM	ENSG00000110711.11	ENST00000683856.1	1225	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	92.3354753060816	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	67481160	False	NA	13	True	TATAAA	-17	NA	67483487	67491101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483711_67487005_67487186_67489266_67489456_67490037_67490215_67490315_67490458_67490787
transcript_26154.known	chr11	+	1304	5	FSM	ENSG00000110711.11	ENST00000525341.2	1304	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	5.78791845139511	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTTGGCCCTGCCTTAC	67480854	False	NA	-91	True	NA	NA	NA	67483181	67490997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67487005_67487186_67489266_67489456_67490037_67490215_67490315
transcript_26156.known	chr11	+	1030	5	FSM	ENSG00000110711.11	ENST00000528641.7	1030	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	95.1981486164516	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGAGTCTGCTGAGCTG	67480713	True	NA	13	True	TATAAA	-17	NA	67483040	67491101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67487005_67487186_67490037_67490215_67490315_67490458_67490787
transcript_26158.known	chr11	+	721	4	FSM	ENSG00000110711.11	ENST00000682659.1	721	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	108.280499937277	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTATTTATCTCTCTCT	67480827	True	NA	-2	True	TATAAA	-2	NA	67483154	67491086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67483258_67490037_67490215_67490315_67490458_67490787
transcript_26160.known	chr11	-	1063	7	FSM	ENSG00000172663.9	ENST00000545682.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	230.140114326517	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAATTGCTCTCCTCCTGT	-67464507	True	NA	-8	True	AATAAA	-22	NA	67469239	67464352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67464697_67464802_67464857_67465055_67465268_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_26161.known	chr11	-	823	6	FSM	ENSG00000172663.9	ENST00000393877.3	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	242.461213392988	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATTTTGTGCTAATAAAAG	-67464518	True	NA	-47	True	NA	NA	NA	67469250	67464391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67464697_67464802_67464857_67467311_67467389_67467500_67467591_67468027_67468093_67469018
transcript_26162.known	chr11	-	397	3	FSM	ENSG00000172663.9	ENST00000536773.1	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	79.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCCAGCCGAGCAGCCC	-67464511	True	NA	NA	False	NA	NA	NA	67469243	67467483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67467591_67468027_67468093_67469018
transcript_26163.known	chr11	-	923	4	FSM	ENSG00000167797.8	ENST00000531178.1	923	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	356.133245975279	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCACAGGCCTGGCACCT	-67502264	True	NA	-57	True	NA	NA	NA	67508158	67506619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67507859
transcript_26164.known	chr11	-	909	4	FSM	ENSG00000167797.8	ENST00000301488.8	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	37.0255167268316	1593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGAGCCTTTCTGGGTC	-67502268	True	NA	-13	True	AATAAA	-25	NA	67508162	67506496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67507013_67507364_67507498_67507591_67507690_67508000
transcript_26169.known	chr11	-	634	3	FSM	ENSG00000167797.8	ENST00000531506.1	634	3	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_2	12.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCTGTGGAGGGTTGCTG	-67502197	True	NA	NA	False	NA	NA	NA	67508091	67507052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67507498_67507591_67507690_67508000
transcript_2617.known	chr1	+	997	2	FSM	ENSG00000249087.8	ENST00000454117.2	1266	2	269	0	-5	0	multi-exon	FALSE	canonical	2	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCCTTGATGTGTGTAAT	23369112	False	NA	63	True	TTTAAA	-2	NA	23369217	23371839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23369514_23371138
transcript_2618.known	chr1	+	376	2	ISM	ENSG00000249087.8	ENST00000518600.2	483	3	1921	0	1906	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAATTGTCATAGTTTTT	23371038	False	NA	7	True	AATAAA	-23	NA	23371143	23371783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_23371210_23371473
transcript_26180.known	chr11	+	741	7	FSM	ENSG00000084207.18	ENST00000398606.10	741	7	0	0	0	0	multi-exon	FALSE	canonical	3	6807	junction_1	2259.32015339915	48531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCACTGTGTTTCCT	67390038	True	NA	43	True	AATAAA	-17	NA	67583811	67586653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586103_67586212_67586388
transcript_26181.known	chr11	+	706	6	FSM	ENSG00000084207.18	ENST00000398603.6	706	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	5142.2341992562	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCACTGTGTTTCCTGGG	67389968	True	NA	46	True	AATAAA	-20	NA	67583741	67586656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67583845_67584133_67584170_67584463_67584571_67584684_67584773_67585137_67585242_67586388
transcript_26182.known	chr11	+	723	5	FSM	ENSG00000084207.18	ENST00000498765.5	723	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5532.13229121466	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTTTGCCTTCCTTTCTC	67584453	False	NA	-6	True	NA	NA	NA	67584463	67586604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67584571_67584684_67584773_67585037_67585242_67586103_67586212_67586388
transcript_26188.known	chr11	+	1560	10	FSM	ENSG00000167792.13	ENST00000322776.11	1560	10	0	0	0	0	multi-exon	TRUE	canonical	3	888	junction_1	84.5683301782399	2972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCTTTACCCTTTACCCA	67595041	True	NA	45	True	AATAAA	-41	NA	67606935	67612554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67607077_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_2619.known	chr1	-	1719	11	FSM	ENSG00000204219.11	ENST00000450454.7	1719	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.26885775404495	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGATACACCATTTGGCT	-23424728	True	NA	NA	False	NA	NA	NA	23424748	23380908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23381475_23384345_23384418_23387272_23387420_23393878_23394034_23397544_23397602_23397791_23397956_23408663_23408727_23417248_23417391_23417903_23418010_23419076_23419140_23424564
transcript_26190.known	chr11	+	1512	10	FSM	ENSG00000167792.13	ENST00000415352.6	1512	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.148040119977	1154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCGCTGCTGTGACTGT	67595049	True	NA	26	True	AATAAA	-22	NA	67606943	67612535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_67607056_67608395_67608479_67608551_67608723_67609451_67609636_67610380_67610571_67610994_67611208_67611402_67611570_67611896_67611979_67612119_67612266_67612371
transcript_262.known	SIRV4	+	950	2	FSM	SIRV4C	SIRV410	950	2	0	0	0	0	multi-exon	FALSE	canonical	3	1905	junction_1	0	5920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTATATGTTGTTGCTG	NA	False	NA	NA	False	NA	NA	NA	1455	2771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_+_1886_2251
transcript_26210.known	chr11	-	745	4	FSM	ENSG00000167799.10	ENST00000376693.3	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	8.80656320908194	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTCTTGCTTCTGCTGTA	-67629407	True	NA	-1	True	AATAAA	-18	NA	67629937	67627937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67628252_67628322_67628401_67628918_67629052_67629717
transcript_26211.nic	chr11	-	676	3	ISM	ENSG00000132744.8	ENST00000529256.1	933	7	2358	-146	2358	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCATGGTTTGTGTCCTC	NA	False	NA	NA	False	TATAAA	-17	NA	67645225	67642554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_67642940_67644759_67644870_67645044
transcript_26214.nnic	chr11	+	867	3	Intergenic	novelGene_7	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_1	0	61854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAAGGGGGGTTGTTCTC	NA	False	NA	NA	False	NA	NA	NA	67682705	67856763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr11_+_67683099_67854614_67854792_67856466
transcript_26216.known	chr11	-	287	1	FSM	ENSG00000239559.2	ENST00000472498.2	287	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3865	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTTAAGAATGTCAACAAT	-67682323	False	NA	NA	False	NA	NA	NA	67683058	67682771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67682800_67683100
transcript_26221.nic	chr11	-	859	5	NIC	ENSG00000160172.10	novel	1004	8	NA	NA	-33	294	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	21.3585462988472	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTCCCCCAATGTG	-67805264	True	NA	NA	False	AATAAA	-16	NA	67805369	67792901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_67793294_67796683_67796834_67799373_67799476_67803001_67803065_67805217
transcript_26222.known	chr11	-	1857	4	FSM	ENSG00000160172.10	ENST00000529253.5	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.3781471969828	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAAGATGATCTGTGGCTA	-67805229	True	NA	NA	False	AATAAA	-31	NA	67805334	67791766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67793294_67796683_67796834_67803001_67803065_67805217
transcript_26223.nnic	chr11	-	1830	4	NIC	ENSG00000160172.10	novel	1004	8	NA	NA	-33	3	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	22.5289936649544	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCGAAG	-67805264	True	NA	NA	False	AATAAA	-17	NA	67805369	67791780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_67793294_67799373_67799476_67803001_67803065_67805217
transcript_26227.nnic	chr11	-	709	4	NIC	ENSG00000160172.10	novel	1004	8	NA	NA	-33	294	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	22.5289936649544	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTTCCCCCAATGTG	-67805264	True	NA	NA	False	AATAAA	-16	NA	67805369	67792901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_67793294_67799373_67799476_67803001_67803065_67805217
transcript_26228.known	chr11	-	1814	3	FSM	ENSG00000160172.10	ENST00000531806.5	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTTGGCAAGAATGATG	-67805217	True	NA	NA	False	NA	NA	NA	67805322	67791647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67793294_67803001_67803065_67805217
transcript_26234.known	chr11	-	776	4	FSM	ENSG00000254610.3	ENST00000527543.2	776	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0.471404520791032	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	-67955645	True	NA	NA	False	NA	NA	NA	67955802	67934562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_67934709_67936774_67936992_67939682_67939775_67955481
transcript_26235.nnic	chr11	-	687	3	NIC	ENSG00000254610.3	novel	776	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATAAATACAGTAAAAGAGAA	-67955648	True	NA	NA	False	NA	NA	NA	67955805	67934562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_67934709_67936774_67936992_67955481
transcript_26240.known	chr11	-	739	4	FSM	ENSG00000255306.1	ENST00000532296.1	739	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACAATTCAAGAGATGAA	-68030444	False	NA	NA	False	AATAAA	-27	NA	68030461	68024808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68025062_68025186_68025333_68029283_68029421_68030258
transcript_26247.known	chr11	+	689	7	FSM	ENSG00000110717.13	ENST00000526339.5	689	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1316.16455615888	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGTTGCTCAACAACG	68008146	True	NA	NA	False	NA	NA	NA	68030742	68036514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030878_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_26256.known	chr11	+	353	3	FSM	ENSG00000110717.13	ENST00000528492.1	353	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	100	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACGGCCTCTTGTCTTG	68008091	True	NA	10	True	AATAAA	-11	NA	68030687	68036639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030734_68036252_68036382_68036461
transcript_26259.known	chr11	+	737	7	FSM	ENSG00000110717.13	ENST00000313468.10	737	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1066.02857216243	8720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCTCTTGTCTTGACTCT	68008084	True	NA	15	True	AATAAA	-16	NA	68030680	68036644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68030734_68032151_68032210_68032285_68032337_68032922_68033013_68033110_68033284_68036252_68036382_68036461
transcript_26261.known	chr11	+	2668	20	FSM	ENSG00000110719.10	ENST00000265686.8	2668	20	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_5	19.3155743570411	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTCTCGTCTCTCTTC	68037448	True	NA	7	True	AATAAA	-18	NA	68039024	68050895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68039120_68041267_68041389_68041752_68041832_68042642_68042864_68042945_68043032_68043370_68043498_68043570_68043654_68043813_68043908_68044131_68044345_68044957_68045103_68047432_68047573_68047646_68047805_68047881_68047973_68048878_68048998_68049080_68049295_68049662_68049789_68049961_68050067_68050136_68050255_68050486_68050665_68050740
transcript_26269.known	chr11	-	1599	11	FSM	ENSG00000110066.15	ENST00000402789.5	1599	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	88.7380414478481	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTTTCTGAGTCTGG	-68213583	False	NA	-4	True	AATAAA	-15	NA	68213595	68165718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68165949_68166981_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_26271.known	chr11	-	2869	10	FSM	ENSG00000110066.15	ENST00000405515.5	2869	10	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_9	28.4518219599291	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTGAGTCTGGTTCC	-68213816	False	NA	0	True	AATAAA	-19	NA	68213828	68165714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68167179_68171014_68171152_68171231_68171252_68171542_68171710_68173803_68173914_68175017_68175184_68180131_68180201_68185780_68185929_68189916_68190153_68213476
transcript_26277.known	chr11	-	980	5	FSM	ENSG00000171067.11	ENST00000533310.5	980	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	114.281450813332	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGTCCTTTCCTTTTGCCT	-68267108	True	NA	-151	True	NA	NA	NA	68271947	68261608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271645
transcript_26278.nic	chr11	-	1074	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-5	3	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	80.1888396224811	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGTGTGGGTGCATCCTGCT	-68267139	True	NA	-21	True	ATTAAA	-21	NA	68271978	68261334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_26280.nic	chr11	-	946	5	NIC	ENSG00000171067.11	novel	980	5	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	117	junction_1	80.1888396224811	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTTGTAAATGATTC	-68267139	True	NA	-5	True	ACTAAA	-21	NA	68271978	68261462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68261726_68262730_68262919_68263691_68263867_68268053_68268252_68271856
transcript_26284.known	chr11	-	941	4	FSM	ENSG00000171067.11	ENST00000530166.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	140.952316602302	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTCCACTACCGCCACTGGG	-68267162	True	NA	NA	False	NA	NA	NA	68272001	68262462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68262919_68263572_68263715_68268053_68268252_68271856
transcript_26288.known	chr11	-	2071	4	FSM	ENSG00000171067.11	ENST00000304271.11	2071	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_1	6.94422221866655	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATCGTGTGGGTGCATCCT	-68267134	True	NA	-24	True	ATTAAA	-18	NA	68271973	68261337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68262919_68263691_68263867_68268053_68268252_68271856
transcript_26294.known	chr11	-	687	3	FSM	ENSG00000171067.11	ENST00000532534.5	687	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	3.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTGTGGCCGAATCCC	-68267077	True	NA	-78	True	GGGGCT	-2	NA	68271916	68267179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68267398_68268053_68268252_68271645
transcript_26295.known	chr11	-	610	3	FSM	ENSG00000171067.11	ENST00000529590.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	133.5	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTATTCCAGGGCTGCCT	-68267132	True	NA	1	True	AATAAA	-34	NA	68271971	68267100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68267398_68268053_68268252_68271856
transcript_26298.nnic	chr11	-	729	3	NNC	ENSG00000171067.11	novel	687	3	NA	NA	0	-16	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	16	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCCACCATTCACTTC	-68267134	True	NA	-15	True	AATAAA	-18	NA	68271973	68267116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_68267320_68268053_68268252_68271645
transcript_26299.nnic	chr11	-	523	3	NNC	ENSG00000171067.11	novel	610	3	NA	NA	-5	-16	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	146	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCCACCATTCACTTC	-68267139	True	NA	-15	True	AATAAA	-18	NA	68271978	68267116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_68267320_68268053_68268252_68271856
transcript_263.nnic	SIRV4	-	963	2	Antisense	novelGene_SIRV4C_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	569	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCGACTGTACTACTATA	NA	False	NA	NA	False	NA	NA	NA	2771	1447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_SIRV4_-_1882_2242
transcript_2630.known	chr1	-	950	3	FSM	ENSG00000117318.9	ENST00000374561.6	950	3	0	0	0	0	multi-exon	FALSE	canonical	3	4523	junction_1	107.5	18689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATGACACCCGTCTCCA	-23490266	True	NA	-19	True	AATAAA	-22	NA	23559501	23557925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23558416_23558934_23559020_23559126
transcript_26301.known	chr11	-	485	3	FSM	ENSG00000171067.11	ENST00000532969.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	151	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGGTTCTCCCTGACCTT	-68267079	True	NA	NA	False	NA	NA	NA	68271918	68267460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68267686_68268053_68268252_68271856
transcript_26304.known	chr11	+	635	3	FSM	ENSG00000286369.2	ENST00000668632.2	642	3	2	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCCAGTCTTGGGTCT	68271973	True	NA	NA	False	ATTAAA	-16	NA	68272101	68284879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68272177_68282813_68282996_68284501
transcript_26305.nnic	chr11	+	647	3	NNC	ENSG00000286369.2	novel	642	3	NA	NA	-44	-5	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCCAGTCTTGGGTCT	NA	False	NA	NA	False	ATTAAA	-16	NA	68272055	68284879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68272177_68282847_68282996_68284501
transcript_26307.nnic	chr11	+	520	2	FSM	ENSG00000286369.2	ENST00000692178.1	433	2	-72	-15	-70	15	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGTTATTTGAATGTAAG	NA	False	NA	NA	False	AATAAA	-33	NA	68272029	68274733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68272177_68274360
transcript_26308.known	chr11	+	5177	23	FSM	ENSG00000162337.12	ENST00000294304.12	5177	23	0	0	0	0	multi-exon	TRUE	canonical	2	69	junction_1	14.7506128181983	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCATTCTTTCGTGCCCT	68310721	True	NA	21	True	TATAAA	-21	NA	68312590	68449275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68312806_68347846_68348244_68357649_68357848_68363746_68363944_68365570_68365703_68386315_68386713_68389880_68390053_68403482_68403700_68406523_68406814_68409913_68410141_68411435_68411621_68413688_68414013_68416327_68416528_68423488_68423698_68425101_68425293_68425977_68426188_68429574_68429701_68433601_68433839_68436888_68437000_68438445_68438683_68439776_68439917_68446435_68446534_68448808
transcript_2631.known	chr1	-	623	2	FSM	ENSG00000117318.9	ENST00000463312.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	4523	junction_1	0	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTGTATATGATGACACC	-23559049	False	NA	-27	True	AATAAA	-14	NA	23559075	23557933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23558416_23558934
transcript_26311.known	chr11	+	4292	24	FSM	ENSG00000110075.15	ENST00000524904.5	4292	24	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_15	164.46114105987	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAGAATCAAACGTCTAA	68446631	True	NA	-5	True	NA	NA	NA	68460754	68614575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68583042_68583130_68587944_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_26313.known	chr11	+	2771	23	FSM	ENSG00000110075.15	ENST00000524845.5	2771	23	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_14	121.695706749755	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGTGACGTCTGCTGCTGC	68446625	True	NA	NA	False	NA	NA	NA	68460748	68613117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120_68551187_68554144_68554258_68558565_68558680_68564302_68564433_68567013_68567167_68569747_68569898_68571039_68571105_68574108_68574225_68575957_68576044_68587926_68588025_68590659_68590715_68591575_68591707_68596096_68596219_68600340_68600495_68601862_68601970_68603341_68603493_68609903_68610024_68613065
transcript_26317.nic	chr11	+	919	6	ISM	ENSG00000110075.15	ENST00000524845.5	2771	23	-32	61898	-14	0	5prime_fragment	FALSE	canonical	3	631	junction_1	62.272305240773	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAACAAAAAACT	68446593	True	NA	NA	False	NA	NA	NA	68460716	68551219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_68460828_68519500_68519652_68537658_68537892_68544837_68545025_68548066_68548205_68551120
transcript_26319.nic	chr11	+	1395	2	ISM	ENSG00000110075.15	ENST00000530427.5	560	5	-14	31241	-14	-31241	5prime_fragment	FALSE	canonical	3	229	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	68446593	True	NA	NA	False	NA	NA	NA	68460716	68506428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_68460828_68505144
transcript_26322.nnic	chr11	+	759	6	NNC	ENSG00000069482.7	novel	749	6	NA	NA	-759	0	at_least_one_novel_splicesite	FALSE	canonical	2	27	junction_1	982.067736971335	198	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68682984	True	NA	14	True	AATAAA	-13	NA	68683019	68691175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_68683219_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_26324.known	chr11	+	749	6	FSM	ENSG00000069482.7	ENST00000265643.4	749	6	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_3	97.7404726814844	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68664268	True	NA	14	True	AATAAA	-13	NA	68684543	68691175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68684733_68684923_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_26327.nic	chr11	+	754	5	NIC	ENSG00000069482.7	novel	749	6	NA	NA	186	0	intron_retention	FALSE	canonical	3	2351	junction_2	109.18562176404	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCAATTGTCTTTTTCTT	68684718	False	NA	14	True	AATAAA	-13	NA	68684729	68691175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_68685005_68685593_68685649_68688013_68688101_68688848_68688927_68690916
transcript_26328.nic	chr11	-	2364	7	NIC	ENSG00000132749.11	novel	2535	10	NA	NA	-216	0	intron_retention	FALSE	canonical	3	66	junction_3	42.4761370915744	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTCATTAACTTAGTA	-68750816	False	NA	-18	True	AATAAA	-19	NA	68750827	68707439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68708501_68710873_68711050_68713269_68713408_68715836_68715940_68738699_68738789_68747207_68747367_68750189
transcript_26332.nic	chr11	-	2551	4	NIC	ENSG00000132749.11	novel	3495	5	NA	NA	-130	-3	combination_of_known_junctions	FALSE	canonical	3	69	junction_1	49.4435705291059	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCTTCTCTGGAAATTT	-68749214	True	NA	-4	True	AATAAA	-13	NA	68750741	68736134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_68737886_68738699_68738789_68747207_68747367_68750189
transcript_26334.nic	chr11	-	897	3	ISM	ENSG00000132749.11	ENST00000540869.5	724	5	-470	6010	-124	-135	5prime_fragment	FALSE	canonical	3	125	junction_1	32.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATGACTTCTGAGA	-68749208	True	NA	NA	False	TATAAA	-16	NA	68750735	68738596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_68738789_68747207_68747367_68750189
transcript_26337.nic	chr11	-	866	3	ISM	ENSG00000132749.11	ENST00000544963.1	1235	6	722	6492	-127	-81	internal_fragment	FALSE	canonical	3	47	junction_1	71.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAGTTGGTAAATGAATA	-68749211	True	NA	-3	True	AATAAA	-18	NA	68750738	68744953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_68745112_68747207_68747367_68750189
transcript_26339.known	chr11	-	643	2	FSM	ENSG00000132749.11	ENST00000432435.2	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTCGACTGATCATTTC	-68750600	False	NA	-36	True	ACTAAA	-19	NA	68750611	68747145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68747367_68750189
transcript_26340.known	chr11	-	398	2	FSM	ENSG00000132749.11	ENST00000538944.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCGTAGTCCATATTAGTA	-68747356	False	NA	3	True	ATTAAA	-17	NA	68747366	68744872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68745112_68747207
transcript_26341.known	chr11	-	5238	19	FSM	ENSG00000110090.13	ENST00000265641.10	5238	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	3.74989711793027	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGTTTCTGTCTCTTTT	-68840781	True	NA	-1	True	AATAAA	-24	NA	68841916	68754882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68757731_68759568_68759662_68760224_68760339_68761534_68761688_68762626_68762762_68773264_68773430_68775315_68775433_68780639_68780746_68781770_68781960_68784814_68785011_68793314_68793403_68794803_68794912_68796855_68796934_68799217_68799356_68803999_68804102_68807466_68807639_68812436_68812577_68815333_68815488_68841774
transcript_26345.nic	chr11	-	850	4	ISM	ENSG00000110090.13	ENST00000265641.10	5238	19	46	52296	46	337	5prime_fragment	FALSE	canonical	3	13	junction_2	4.71404520791032	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTAGTGTTCTTGACT	-68840735	True	NA	-1	True	AATAAA	-18	NA	68841870	68807178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_68807639_68812436_68812577_68815333_68815488_68841774
transcript_26359.known	chr11	-	764	7	FSM	ENSG00000197345.13	ENST00000541279.1	764	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	553.075165677224	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAGACCAGGTTTCTGTG	-68890206	True	NA	-12	True	AATAAA	-13	NA	68903827	68891282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68891396_68892889_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_26370.known	chr11	-	693	7	FSM	ENSG00000197345.13	ENST00000362034.7	693	7	0	0	0	0	multi-exon	TRUE	canonical	3	1442	junction_2	86.9725371725019	8143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCAGGTTTCTGTGTTCTG	-68890211	True	NA	-7	True	AATAAA	-18	NA	68903832	68891277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68891396_68892889_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900547_68900606_68903722
transcript_26386.known	chr11	-	932	6	FSM	ENSG00000197345.13	ENST00000567045.5	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_4	520.54609786262	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGCGCGTGACCCCACCT	-68890157	True	NA	NA	False	NA	NA	NA	68903778	68892491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68892994_68893402_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_26394.known	chr11	-	2283	6	FSM	ENSG00000197345.13	ENST00000565125.5	2283	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	701.256415300423	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCAGGTTTCTGTGTTCT	-68890214	True	NA	-8	True	AATAAA	-17	NA	68903835	68891278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_68892994_68893321_68893456_68896514_68896679_68897926_68898013_68900534_68900606_68903722
transcript_26395.known	chr11	+	2914	14	FSM	ENSG00000132740.10	ENST00000675615.1	2914	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	25.2263129272854	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCCCCGCGGAGCTCTCT	68901709	True	NA	NA	False	NA	NA	NA	68903862	68939746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_68904039_68906068_68906239_68908144_68908338_68908533_68908632_68911439_68911604_68914822_68915024_68917735_68917884_68929182_68929358_68933298_68933482_68933794_68933914_68934463_68934559_68935298_68935423_68936236_68937092_68939533
transcript_26398.nic	chr11	+	715	2	ISM	ENSG00000132740.10	ENST00000545146.1	477	3	-47	1569	-12	385	5prime_fragment	FALSE	canonical	3	109	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACCCATTTCTTTTCTTT	68901725	True	NA	NA	False	AATAAA	-20	NA	68903878	68906623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_68904039_68906068
transcript_26400.known	chr11	-	2132	3	FSM	ENSG00000172935.9	ENST00000309099.7	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGGCTTCATGCCC	-69012969	True	NA	-22	True	AATAAA	-17	NA	69013246	69004397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69006262_69009853_69009958_69013082
transcript_26401.known	chr11	+	2381	3	FSM	ENSG00000172927.9	ENST00000441339.3	2381	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTTTCCTGGTGCATT	69294103	True	NA	NA	False	AATAAA	-26	NA	69294154	69297287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69294577_69295232_69295496_69295591
transcript_26402.known	chr11	+	2287	3	FSM	ENSG00000172927.9	ENST00000308946.3	2287	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTTTCCTGGTGCATT	69294103	True	NA	NA	False	AATAAA	-26	NA	69294154	69297287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69294577_69295326_69295496_69295591
transcript_26403.known	chr11	+	2468	2	FSM	ENSG00000172927.9	ENST00000535653.1	2468	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTAGTTTCCTGGTGCATT	69294112	True	NA	NA	False	AATAAA	-26	NA	69294163	69297287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69294577_69295232
transcript_26404.known	chr11	+	599	2	FSM	ENSG00000172927.9	ENST00000544008.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGGTATCTGTTGTTTG	69294099	True	NA	NA	False	AATAAA	-26	NA	69294150	69341682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69294577_69341509
transcript_26410.nic	chr11	-	1480	6	NIC	ENSG00000149716.13	novel	2484	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	25.4369809529354	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-69673336	True	NA	0	True	AGTAAA	-21	NA	69675418	69665562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_69666410_69667478_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_26412.known	chr11	+	4238	5	FSM	ENSG00000110092.4	ENST00000227507.3	4238	5	0	0	0	0	multi-exon	TRUE	canonical	3	614	junction_4	53.9785837161369	712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGGTGCCTGCCTCTTTG	69626629	True	NA	15	True	AATAAA	-16	NA	69641155	69654474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_69641512_69643030_69643247_69643831_69643992_69647993_69648143_69651117
transcript_26415.known	chr11	-	2484	5	FSM	ENSG00000149716.13	ENST00000279147.9	2484	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	14.6543508897528	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGGGACCATTTATAACA	-69673271	True	NA	0	True	AGTAAA	-21	NA	69675353	69665562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_26419.known	chr11	-	444	4	FSM	ENSG00000149716.13	ENST00000543562.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	15.4344492037203	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCGAGGAACAGATGTGTG	-69673268	True	NA	NA	False	NA	NA	NA	69675350	69667493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69667588_69667894_69668013_69671748_69671820_69675189
transcript_26420.known	chr11	-	817	4	FSM	ENSG00000149716.13	ENST00000539414.5	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.2565175405668	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAGACCGAACGTCGAGG	-69673240	True	NA	NA	False	NA	NA	NA	69675322	69667505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69668013_69671748_69671820_69673215_69673322_69675189
transcript_26421.nnic	chr11	-	1044	4	NNC	ENSG00000149716.13	novel	775	3	NA	NA	-2	799	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	33.4896335536171	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATACGGGTAGTTCTTTC	-69673336	True	NA	NA	False	NA	NA	NA	69675418	69670578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_69671217_69671748_69671820_69673215_69673322_69675189
transcript_26424.known	chr11	-	2274	3	FSM	ENSG00000149716.13	ENST00000536870.5	2274	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGGGACCATTTATA	-69673241	True	NA	-3	True	AGTAAA	-18	NA	69675323	69665565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69667588_69667894_69668013_69675189
transcript_26428.known	chr11	-	775	3	FSM	ENSG00000149716.13	ENST00000542341.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	7	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATCACTTGGGCTCAG	-69673334	True	NA	54	True	AATAAA	-15	NA	69675416	69671377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69671820_69673215_69673322_69675189
transcript_26431.known	chr11	-	1000	7	FSM	ENSG00000149716.13	ENST00000538554.6	1000	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	31.2058577122238	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCAAGATGTGCAAATTGT	-69673262	True	NA	-13	True	AATAAA	-18	NA	69675344	69653075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69653320_69654157_69654411_69656599_69656653_69667894_69668013_69671748_69671820_69673215_69673322_69675189
transcript_26432.known	chr11	-	1821	3	FSM	ENSG00000162344.4	ENST00000294312.4	1821	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	5.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-69703926	False	NA	-7	True	ATTAAA	-17	NA	69704022	69698237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_69699577_69703260_69703365_69703644
transcript_26433.nic	chr11	-	1687	2	ISM	ENSG00000162344.4	ENST00000294312.4	1821	3	414	0	414	0	3prime_fragment	FALSE	canonical	3	224	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAAAGGTGCATTCTATTA	-69703512	False	NA	-7	True	ATTAAA	-17	NA	69703608	69698237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_69699577_69703260
transcript_26439.nnic	chr11	-	677	4	NNC	ENSG00000254721.1	novel	976	2	NA	NA	-5089	-36	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	2.35702260395516	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCAGGTGGTCTGTGGCT	-70212430	False	NA	NA	False	AATAAA	-16	NA	70212479	70206606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_70206935_70208527_70208578_70209149_70209258_70212288
transcript_26443.known	chr11	+	3249	18	FSM	ENSG00000085733.16	ENST00000301843.13	3249	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	96.7934339618731	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCGTGATTTGCTTTGGT	70372051	True	NA	26	True	AATAAA	-15	NA	70398528	70436575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70421469_70421581_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_26445.known	chr11	+	3272	17	FSM	ENSG00000085733.16	ENST00000346329.7	3272	17	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_10	31.1926974627075	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGGTCTGTGGTCA	70398389	False	NA	35	True	AATAAA	-24	NA	70398403	70436584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409830_70409961_70414541_70414653_70415662_70415718_70417012_70417124_70419745_70419857_70420399_70420511_70422939_70422996_70425331_70425402_70429050_70429200_70431190_70431281_70433100_70433279_70433646_70433719_70435025
transcript_26452.nnic	chr11	+	544	5	NNC	ENSG00000085733.16	novel	597	6	NA	NA	-21	985	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	156.521564009564	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGATGTTAAATTCTGAA	70372030	True	NA	NA	False	ATTAAA	-15	NA	70398507	70409327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517_70407592_70409148
transcript_26453.known	chr11	+	1087	4	FSM	ENSG00000085733.16	ENST00000482755.6	1087	4	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	4.98887651569859	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGGCACAGCCTGCACAA	70372059	True	NA	NA	False	NA	NA	NA	70398536	70408342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_70398615_70405264_70405362_70407297_70407385_70407517
transcript_26457.nic	chr11	+	1379	2	ISM	ENSG00000085733.16	ENST00000482755.6	1087	4	-29	1806	-21	-1806	5prime_fragment	FALSE	canonical	3	366	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAAATTTTATATTTTA	70372030	True	NA	NA	False	NA	NA	NA	70398507	70406536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_70398615_70405264
transcript_26458.known	chr11	-	554	2	FSM	ENSG00000246889.3	ENST00000530690.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGTGGTTCATGTCCCCA	-70397653	True	NA	NA	False	NA	NA	NA	70398362	70372245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_70372535_70398097
transcript_26460.known	chr11	-	392	2	FSM	ENSG00000246889.3	ENST00000524619.2	513	2	121	0	60	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTGGCTCGCGTCTGTAAT	-70397593	True	NA	NA	False	ATTAAA	-32	NA	70398302	70381090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_70381278_70398097
transcript_26465.known	chr11	-	2627	9	FSM	ENSG00000172893.18	ENST00000355527.8	2627	9	0	0	0	0	multi-exon	TRUE	canonical	3	830	junction_3	56.4905965626139	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGTGTGGTTTCTGAC	-71433309	True	NA	NA	False	ATTAAA	-19	NA	71448393	71434410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448289
transcript_26466.known	chr11	-	2601	9	FSM	ENSG00000172893.18	ENST00000407721.6	2601	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	281.948327491049	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTGGCTGTGTGGTTTCT	-71433309	True	NA	NA	False	ATTAAA	-16	NA	71448393	71434413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71435840_71437811_71437944_71438878_71439084_71441226_71441441_71442262_71442354_71443992_71444216_71444854_71444959_71447609_71447735_71448312
transcript_26476.known	chr11	+	680	2	FSM	ENSG00000254682.2	ENST00000529369.2	792	2	112	0	112	0	multi-exon	FALSE	canonical	3	150	junction_1	0	812	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGAATTGTGTGTTTTT	71447048	True	NA	6	True	AATAAA	-19	NA	71448673	71452157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71448886_71451689
transcript_26478.known	chr11	+	2679	21	FSM	ENSG00000172890.13	ENST00000319023.7	2679	21	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_10	14.6876648926914	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGTCTGGGGACCAGTC	71450881	True	NA	NA	False	NA	NA	NA	71453202	71501816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052_71464143_71472448_71472501_71473277_71473367_71473568_71473687_71474394_71474527_71478394_71478470_71480754_71480880_71481355_71481405_71481922_71482026_71482848_71483018_71484311_71484448_71485541_71485649_71490844_71490977_71491833_71491904_71497482_71497612_71498351_71498529_71501301
transcript_26487.known	chr11	+	603	5	FSM	ENSG00000172890.13	ENST00000525245.1	603	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.0284758805331	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTCTTATTTATTTGC	71451034	False	NA	22	True	AATAAA	-31	NA	71453355	71460947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71460040_71460214_71460721
transcript_26488.known	chr11	+	839	5	FSM	ENSG00000172890.13	ENST00000524949.5	839	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_4	15.2561463023924	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGCAAATAAAAAGGGTGT	71450909	True	NA	NA	False	AATGAA	-45	NA	71453230	71464508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71463431_71463486_71464052
transcript_26491.known	chr11	+	720	4	FSM	ENSG00000172890.13	ENST00000527538.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	74.5221816344339	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCGACCCCCACGTCTG	71450919	True	NA	NA	False	NA	NA	NA	71453240	71460075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427_71458545_71459674
transcript_26492.nnic	chr11	+	587	4	NIC	ENSG00000172890.13	novel	603	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	74.5221816344339	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGACTGTCTTATTTATTTGC	71450877	True	NA	22	True	AATAAA	-31	NA	71453198	71460947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_71453382_71455109_71455171_71458427_71458545_71460721
transcript_26495.known	chr11	+	963	3	FSM	ENSG00000172890.13	ENST00000534634.5	963	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGGAGGCCTCTGCACGC	71451483	False	NA	NA	False	NA	NA	NA	71453108	71459056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109_71455171_71458427
transcript_26497.known	chr11	+	524	2	FSM	ENSG00000172890.13	ENST00000533612.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTTTGCGTCCCCACA	71450887	True	NA	NA	False	NA	NA	NA	71453208	71455460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71453382_71455109
transcript_265.known	SIRV4	-	617	2	FSM	SIRV4B	SIRV406	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	2881	junction_1	0	4776	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACATTTAAAAATAGCCTGT	NA	False	NA	NA	False	NA	NA	NA	5158	3637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_4104_5007
transcript_26500.nnic	chr11	-	1375	4	NIC	ENSG00000248671.8	novel	1234	4	NA	NA	8710	66	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGGTGCCAGTGCAGGTC	-71804586	True	NA	NA	False	AATAAA	-18	NA	71804705	71673818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_71674783_71739843_71739964_71802857_71802973_71804529
transcript_2651.known	chr1	+	823	6	FSM	ENSG00000142676.14	ENST00000467075.2	823	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4775.44131573198	63096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTTGTGTGTTCTGTGA	23576129	True	NA	55	True	AATAAA	-23	NA	23691820	23696425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23692061_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_26510.known	chr11	+	952	5	FSM	ENSG00000158483.18	ENST00000426628.7	956	5	4	0	-2	0	multi-exon	TRUE	canonical	3	11	junction_2	29.8872882677569	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGCTGCAGCTGCCACAT	71785883	True	NA	NA	False	NA	NA	NA	71787517	71800103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71787633_71789782_71789846_71791738_71791820_71796016_71796167_71799560
transcript_26517.known	chr11	+	2010	4	FSM	ENSG00000158483.18	ENST00000346333.11	2044	4	29	5	-1	1	multi-exon	FALSE	canonical	3	61	junction_2	11.4406682011537	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACACCCCTTAATCTACAG	71785875	True	NA	NA	False	AATAAA	-18	NA	71787509	71801234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799560
transcript_26521.nnic	chr11	+	1977	4	FSM	ENSG00000158483.18	ENST00000687021.1	1984	4	1	6	0	0	multi-exon	FALSE	canonical	2	6	junction_3	34.4770455037358	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	71785846	True	NA	NA	False	AATAAA	-17	NA	71787480	71801233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796167_71799621
transcript_26522.known	chr11	+	990	4	FSM	ENSG00000158483.18	ENST00000688077.1	2141	4	17	1134	0	-4	multi-exon	FALSE	canonical	2	3	junction_3	35.8143360495021	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCCCGCTGCAGCTGCC	71785902	True	NA	NA	False	NA	NA	NA	71787536	71800099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71787633_71789782_71789846_71796016_71796309_71799560
transcript_26533.nic	chr11	-	1268	6	NIC	ENSG00000254469.9	novel	1167	7	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	6.88767014308903	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTTTTTGTTCCTTA	-71928227	True	NA	NA	False	AATAAA	-43	NA	71928642	71865508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_71865855_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928364
transcript_26540.known	chr11	-	4792	6	FSM	ENSG00000254469.9	ENST00000679412.2	4792	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.05538513813742	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATACCAAAGCCTATGGAAT	-71928559	False	NA	NA	False	AATAAA	-18	NA	71928594	71880703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71884622_71916073_71916253_71917620_71917777_71918884_71919027_71923308_71923476_71928364
transcript_26549.known	chr11	-	933	5	FSM	ENSG00000254469.9	ENST00000528511.6	933	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.4731800328267	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAACTTTCCCAGAAAAACAA	-71928560	False	NA	NA	False	AATAAA	-15	NA	71928595	71884312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71884622_71916073_71916253_71917620_71917777_71918884_71919027_71928448
transcript_26551.known	chr11	-	541	2	FSM	ENSG00000254469.9	ENST00000531488.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTATTGTATTGTGTTTCA	-71928412	False	415	98	True	NA	NA	NA	71928447	71927577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_71928036_71928364
transcript_26560.known	chr11	+	2282	9	FSM	ENSG00000137522.18	ENST00000361756.8	2282	9	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	19.3067345763078	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922999	True	NA	24	True	AATAAA	-29	NA	71929045	71997597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_26566.nic	chr11	+	1107	8	NIC	ENSG00000137522.18	novel	2282	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_6	74.9032028415232	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATTTTGATGAATATATT	71922975	True	NA	0	True	AAGAAA	-1	NA	71929021	71996522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
transcript_26572.known	chr11	+	2202	8	FSM	ENSG00000137522.18	ENST00000530137.1	2202	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	58.5752611986476	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAACATTTATCTTGCTT	71923035	True	NA	18	True	AATAAA	-23	NA	71929081	71997591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_26576.known	chr11	+	812	7	FSM	ENSG00000137522.18	ENST00000525243.5	812	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	79.3923100110388	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGGCCACTCAGGACCCC	71923029	True	NA	NA	False	NA	NA	NA	71929075	71996420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_26579.known	chr11	+	2132	7	FSM	ENSG00000137522.18	ENST00000393713.7	2132	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	89.6121271554991	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTATCTTGCTTTCTTCT	71922987	True	NA	24	True	AATAAA	-29	NA	71929033	71997597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71982760_71982916_71987003_71987112_71990596_71990718_71995439_71995552_71996194
transcript_26581.known	chr11	+	786	7	FSM	ENSG00000137522.18	ENST00000530655.5	786	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	97.1552308879398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAGTCCAAGGCATCAACT	71922980	True	NA	NA	False	NA	NA	NA	71929026	71996275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71960749_71960892_71987003_71987112_71990596_71990718_71994718_71994853_71995449_71995552_71996194
transcript_26583.nnic	chr11	+	704	6	NNC	ENSG00000137522.18	novel	721	6	NA	NA	4	-1614	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	81.6945530620004	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGATTCTGCATTATGGTT	71922975	True	NA	NA	False	AATAAA	-24	NA	71929021	71989049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71988891
transcript_26584.known	chr11	+	721	6	FSM	ENSG00000137522.18	ENST00000528683.5	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	7.21110255092798	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAAGGCACTAGGGTGAGA	71923000	True	NA	NA	False	NA	NA	NA	71929046	71990796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760_71982916_71987003_71987112_71990596
transcript_26587.known	chr11	+	571	6	FSM	ENSG00000137522.18	ENST00000530058.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	81.7435012707432	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAACGGGACTTTGCAGA	71922971	True	NA	NA	False	NA	NA	NA	71929017	71990663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982806_71982916_71987003_71987112_71990596
transcript_26599.nic	chr11	+	693	4	ISM	ENSG00000137522.18	ENST00000528683.5	721	6	-25	7626	4	0	5prime_fragment	FALSE	canonical	3	199	junction_2	3.85861230093008	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTGATCATTGTGGTC	71922975	True	NA	NA	False	ATTAAA	-21	NA	71929021	71983170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_71929125_71957226_71957265_71960749_71960892_71982760
transcript_2660.known	chr1	+	879	5	FSM	ENSG00000142676.14	ENST00000458455.2	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	7245	junction_4	2189.55777498562	63232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAATTCTGTTGTGTGT	23692283	False	NA	48	True	AATAAA	-45	NA	23692305	23696418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_26604.known	chr11	+	2642	6	FSM	ENSG00000184154.16	ENST00000289488.8	2129	6	-513	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	5.25357021462548	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCTTGCTGACTCCAT	72080247	True	NA	7	True	GATAAA	-21	NA	72080336	72096895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72088296_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_26607.known	chr11	+	814	6	FSM	ENSG00000184154.16	ENST00000538478.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.0896650077659	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTAGAGATGTTCTCTA	72080600	True	NA	24	True	AATAAA	-38	NA	72080844	72095618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72088339_72088381_72089028_72089166_72093495_72093702_72094947_72095097_72095378
transcript_2661.known	chr1	+	1017	6	FSM	ENSG00000142676.14	ENST00000643754.2	1017	6	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2732.3762112857	147668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTCAGGTTTCTTTTAC	23576114	True	NA	NA	False	ATTAAA	-17	NA	23691805	23696835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23694792_23695797_23695909_23696343
transcript_26614.known	chr11	-	734	6	FSM	ENSG00000110200.9	ENST00000535503.5	734	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	407.243219710286	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCCTTGATTGCCAGGT	-72105567	True	NA	-67	True	NA	NA	NA	72112780	72109649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112733
transcript_26615.known	chr11	-	849	6	FSM	ENSG00000110200.9	ENST00000538919.5	849	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	387.396128013691	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACCAGCTGATGGCCCC	-72105019	False	NA	NA	False	NA	NA	NA	72112232	72109801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72111923
transcript_26616.known	chr11	-	812	6	FSM	ENSG00000110200.9	ENST00000542531.5	812	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	413.638779613324	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-72105066	False	NA	-6	True	AATAAA	-19	NA	72112279	72109588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112215
transcript_2662.known	chr1	+	1600	5	FSM	ENSG00000142676.14	ENST00000443624.6	1600	5	0	0	0	0	multi-exon	FALSE	canonical	3	6155	junction_1	2962.72479104962	4284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAATGTGCAATTCTGTT	23576114	True	NA	42	True	AATAAA	-39	NA	23691805	23696412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23691830_23692608_23692760_23693806_23693914_23694659_23695909_23696343
transcript_26629.known	chr11	-	899	5	FSM	ENSG00000149357.10	ENST00000535872.1	899	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	475.435786936575	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTTGTGACCAGGGTCTG	-72092070	True	NA	-94	True	NA	NA	NA	72103297	72097426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099239_72103219
transcript_2663.known	chr1	+	539	4	FSM	ENSG00000142676.14	ENST00000482370.2	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	11298	junction_3	628.185216848237	2230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGGTGAATGGAGTTGG	23690979	True	NA	NA	False	NA	NA	NA	23692608	23695946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23692760_23693806_23693914_23694659_23694792_23695797
transcript_26633.known	chr11	-	704	5	FSM	ENSG00000110200.9	ENST00000545944.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	382.162514514441	625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-72105473	True	NA	-7	True	AATAAA	-18	NA	72112686	72109589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72112649
transcript_26638.known	chr11	+	2049	4	FSM	ENSG00000184154.16	ENST00000642510.1	2049	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	15.121728296285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAAGATTTCATTTGAT	72080576	False	NA	-36	True	NA	NA	NA	72080665	72096852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72080886_72093495_72093702_72094947_72095097_72095378
transcript_26649.known	chr11	-	1089	5	FSM	ENSG00000149357.10	ENST00000278671.10	1089	5	0	0	0	0	multi-exon	FALSE	canonical	3	942	junction_1	86.1945473913518	6145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGGTTCTGGCCCCTC	-72092070	True	NA	-5	True	GATAAA	-18	NA	72103297	72097291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72097915_72098288_72098416_72098780_72098859_72099110_72099257_72103182
transcript_26650.known	chr11	-	867	6	FSM	ENSG00000110200.9	ENST00000538393.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_4	270.146330717261	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGTCTATTCCCTA	-72105556	True	NA	-7	True	AATAAA	-18	NA	72112769	72109589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111282_72111411_72111497_72112649
transcript_26651.known	chr11	-	848	6	FSM	ENSG00000110200.9	ENST00000535234.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_4	345.532863849446	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCATGTCTATTCCCTAT	-72105561	True	NA	-6	True	AATAAA	-19	NA	72112774	72109588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087_72110226_72110543_72110604_72111156_72111287_72111441_72111497_72112649
transcript_26652.known	chr11	-	872	6	FSM	ENSG00000110200.9	ENST00000545680.5	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	360.887794196479	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	-72105541	True	NA	-4	True	AATAAA	-21	NA	72112754	72109586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109941_72110087_72110226_72110543_72110604_72111156_72111287_72111411_72111497_72112649
transcript_26653.known	chr11	-	500	2	FSM	ENSG00000110200.9	ENST00000543015.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATGTCTATTCCCTATTT	-72103032	False	NA	-4	True	AATAAA	-21	NA	72110245	72109586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72109929_72110087
transcript_26654.known	chr11	+	1061	6	FSM	ENSG00000110195.14	ENST00000393681.6	1061	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.49181208709839	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGTGTCTTGAGAATTAT	NA	False	NA	1	True	AATAAA	-12	NA	72189667	72196298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72189760_72190575_72190642_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_26655.known	chr11	+	930	4	FSM	ENSG00000110195.14	ENST00000393676.5	930	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.96655480858378	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGTCTTGAGAATTATT	72192090	True	NA	2	True	AATAAA	-13	NA	72192139	72196299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72192342_72195270_72195460_72195611_72195748_72195896
transcript_26656.known	chr11	+	1130	5	FSM	ENSG00000110195.14	ENST00000312293.9	1130	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.52268050859363	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGAATGGGAACGTGACTG	NA	False	NA	26	True	AATAAA	-37	NA	72189557	72196323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72189760_72192165_72192342_72195270_72195460_72195611_72195748_72195896
transcript_26658.known	chr11	-	10053	17	FSM	ENSG00000162129.14	ENST00000294053.9	10053	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	37.7069290714585	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-72432274	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72372924_72373015_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_26660.known	chr11	-	9963	16	FSM	ENSG00000162129.14	ENST00000538039.6	9963	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	16.4376262141331	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATTGACAGCACTTTTA	-72432274	True	NA	NA	False	AATAAA	-15	NA	72434531	72285494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72402965_72403053_72430311_72430364_72434071
transcript_26662.known	chr11	-	2071	15	FSM	ENSG00000162129.14	ENST00000340729.9	2071	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	27.9800402619658	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGACTTACCTTCCCCTC	-72432277	True	NA	-9	True	AATAAA	-23	NA	72434534	72293302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72293616_72294021_72294127_72294324_72294445_72294619_72294694_72295491_72295649_72301802_72301965_72302303_72302349_72307198_72307255_72308526_72308605_72317105_72317221_72329706_72329805_72358879_72359009_72380280_72380385_72430311_72430364_72434071
transcript_26663.nnic	chr11	-	810	3	NNC	ENSG00000162129.14	novel	612	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	73.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	-72432303	True	NA	-5	True	ATTAAA	-38	NA	72434560	72428805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_72429075_72430311_72430364_72434071
transcript_26664.known	chr11	-	612	3	FSM	ENSG00000162129.14	ENST00000542555.2	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	65	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTGTATGTGTGATTCAGA	-72432073	False	NA	-5	True	ATTAAA	-38	NA	72434330	72428805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72429107_72430311_72430364_72434071
transcript_26674.nnic	chr11	+	1113	3	NNC	ENSG00000256633.1	novel	664	2	NA	NA	-56	227	intron_retention	FALSE	canonical	2	4	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTGTAGGATATGAAAT	72584185	True	NA	14	True	AATAAA	-28	NA	72584515	72588206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_72585057_72586505_72586672_72587800
transcript_26675.known	chr11	+	664	2	FSM	ENSG00000256633.1	ENST00000545254.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGACTCCAGAGACCAGC	72584241	True	NA	NA	False	NA	NA	NA	72584571	72587979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72585057_72587800
transcript_2668.known	chr1	+	2671	11	FSM	ENSG00000011007.13	ENST00000613537.5	4838	11	1	2166	1	-2130	multi-exon	FALSE	canonical	3	319	junction_10	36.7294160040695	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTATATTATCCCCCA	23738841	True	NA	11	True	AATAAA	-15	NA	23743471	23759893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844_23752031_23752406_23752519_23754099_23754256_23754362_23754461_23755842_23756024_23756273_23756386_23756952_23757126_23759511
transcript_26680.known	chr11	-	2330	7	FSM	ENSG00000214530.10	ENST00000334805.11	2330	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	46.2228899524419	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGCTCATCACTGTGCCT	-72793892	True	NA	-17	True	AATAAA	-17	NA	72794047	72754728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72755143_72755700_72755754_72757766_72757885_72758529_72758634_72759233_72759382_72780974_72781295_72792874
transcript_26684.nnic	chr11	+	513	3	Antisense	novelGene_ENSG00000285693.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATTCTTTCTGGGAGTA	NA	False	NA	NA	False	AATAAA	-20	NA	72793762	72810572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_72794017_72808516_72808619_72810415
transcript_26686.known	chr11	-	321	4	FSM	ENSG00000137478.15	ENST00000543644.1	321	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	24.9977776790036	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTCTGAGCTATTTTAT	NA	False	NA	NA	False	AATAAA	-22	NA	72989012	72983764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_72983853_72984087_72984217_72985061_72985117_72988963
transcript_26688.known	chr11	+	1400	12	FSM	ENSG00000168010.11	ENST00000540222.5	1400	12	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	19.3506144861535	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTTCTCCCAAAGTAGA	72822228	True	NA	-22	True	NA	NA	NA	72822438	72829598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_72822544_72822847_72822962_72824733_72824843_72825301_72825408_72826172_72826244_72826517_72826590_72826702_72826824_72827187_72827294_72828358_72828509_72828728_72828777_72828882_72828985_72829302
transcript_26693.known	chr11	+	2275	7	FSM	ENSG00000021300.14	ENST00000398492.8	2275	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	25.2877880057197	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	NA	False	NA	19	True	AATAAA	-24	NA	73646177	73662819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73646627_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_26695.known	chr11	+	2016	7	FSM	ENSG00000021300.14	ENST00000227214.10	2016	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	6.42910050732864	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGGCTTGCTTTGTTCCC	73647523	False	NA	19	True	AATAAA	-24	NA	73647548	73662819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73647739_73649011_73649088_73650552_73650706_73651787_73651891_73652974_73653015_73660752_73660853_73661465
transcript_26697.known	chr11	-	3326	8	FSM	ENSG00000175582.20	ENST00000336083.8	3326	8	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	155.462181240064	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753628	True	NA	NA	False	AATAAA	-17	NA	73761074	73675637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718612_73718719_73720845_73720900_73730764_73730824_73760565
transcript_26698.known	chr11	-	3389	8	FSM	ENSG00000175582.20	ENST00000310653.10	3389	8	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	113.069962087774	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGACCTGGTTTCCCAT	-73753691	True	NA	NA	False	AATAAA	-17	NA	73761137	73675637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73718784_73718891_73720845_73720900_73730764_73730824_73760565
transcript_26702.known	chr11	-	1267	7	FSM	ENSG00000175582.20	ENST00000536566.5	1267	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	219.173003710666	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGATGGAAATCTCAACAG	-73753628	True	NA	NA	False	NA	NA	NA	73761074	73677590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73677963_73679653_73679721_73707419_73707514_73716250_73716363_73720845_73720900_73730764_73730824_73760565
transcript_26703.known	chr11	-	758	5	FSM	ENSG00000175582.20	ENST00000541588.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	256.161570107618	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTCATCTTCAACCTTC	-73753628	True	NA	NA	False	NA	NA	NA	73761074	73677893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73677963_73679653_73679721_73720845_73720900_73730764_73730824_73760565
transcript_26704.nic	chr11	-	1337	3	ISM	ENSG00000175582.20	ENST00000400470.3	522	7	-515	16018	-6	9282	5prime_fragment	FALSE	canonical	3	565	junction_2	25	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGTATTTATTTGT	-73753679	True	NA	NA	False	NA	NA	NA	73761125	73720181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_73720900_73730764_73730824_73760565
transcript_26705.known	chr11	-	1812	2	FSM	ENSG00000175582.20	ENST00000541795.1	1812	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCAAGTTCTGAAATCAG	-73753571	True	NA	NA	False	GATAAA	-44	NA	73761017	73729463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73730824_73760565
transcript_26712.known	chr11	+	1058	8	FSM	ENSG00000175581.14	ENST00000398483.7	1058	8	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_2	184.623721031039	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATGTGTGTGTGAGAG	73784552	True	NA	18	True	AATAAA	-20	NA	73787905	73864605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73789334_73789491_73805026_73805080_73825707_73825797_73844806_73844977_73859906_73860010_73863171_73863262_73864295
transcript_26725.known	chr11	+	661	6	FSM	ENSG00000175581.14	ENST00000542303.5	661	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	153.462699050942	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGTATGTGTGTGTGA	73784555	True	NA	15	True	AATAAA	-17	NA	73787908	73864602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73863171_73863262_73864295
transcript_26726.known	chr11	+	531	6	FSM	ENSG00000175581.14	ENST00000497094.6	531	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	193.951540339333	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAACCTCTGCAACTCTC	73784537	True	NA	NA	False	NA	NA	NA	73787890	73844934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73825707_73825797_73843246_73843368_73844806
transcript_26727.known	chr11	+	287	3	FSM	ENSG00000175581.14	ENST00000537007.5	287	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	183.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAACTCTCTCTCCAT	73784576	True	NA	NA	False	NA	NA	NA	73787929	73844941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73825707_73825797_73844806
transcript_26728.known	chr11	+	699	6	FSM	ENSG00000175581.14	ENST00000543058.1	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	195.362227669527	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTGTGTGTGAGAGAG	73784603	True	NA	20	True	AATAAA	-22	NA	73787956	73864607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73787993_73805026_73805080_73808312_73808351_73844806_73844977_73863171_73863262_73864295
transcript_2673.nic	chr1	-	1164	5	NIC	ENSG00000236810.7	novel	1112	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	6.25999201277446	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTCAGGGCTACAAA	-23777694	True	NA	-17	True	ATTAAA	-24	NA	23778328	23760514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_23761152_23771701_23771884_23772110_23772167_23772267_23772427_23778198
transcript_26742.known	chr11	+	1612	13	FSM	ENSG00000175575.13	ENST00000544552.5	1612	13	0	0	0	0	multi-exon	FALSE	canonical	1	24	junction_1	273.309488289172	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTTAAATACTCTTACT	73871659	True	NA	34	True	AATAAA	-35	NA	73877027	73927745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73877069_73878782_73878820_73887039_73887100_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_26756.known	chr11	+	4954	12	FSM	ENSG00000175575.13	ENST00000310571.8	4954	12	0	0	0	0	multi-exon	FALSE	canonical	1	87	junction_8	164.383144457752	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATAAGGAGGGATATGG	73871630	True	NA	NA	False	ATTAAA	-18	NA	73876998	73931114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73877069_73878778_73878820_73887353_73887458_73891111_73891202_73899145_73899245_73900269_73900421_73909398_73909594_73914412_73914505_73916544_73916661_73918949_73919033_73924614_73924698_73927284
transcript_26770.known	chr11	-	818	2	FSM	ENSG00000181924.7	ENST00000355693.5	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_1	0	3697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTTTTTCTTTTGTTTTT	-73862032	True	NA	-1	True	AATAAA	-22	NA	73876846	73872666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73873395_73876756
transcript_26771.known	chr11	-	922	2	FSM	ENSG00000181924.7	ENST00000545127.1	922	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATATGTTTTTCTTTTGTTT	-73876598	False	NA	-3	True	AATAAA	-20	NA	73876674	73872668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73873395_73876478
transcript_26772.known	chr11	+	2020	2	FSM	ENSG00000175575.13	ENST00000381783.4	2020	2	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGCCAGG	73871605	True	NA	NA	False	NA	NA	NA	73876973	73880703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_73877069_73878778
transcript_26773.known	chr11	-	582	3	FSM	ENSG00000181924.7	ENST00000537289.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGGAGTTGAGAGCCAT	-73862029	True	NA	NA	False	AAAACA	-16	NA	73876843	73872996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73873395_73876478_73876576_73876756
transcript_26777.known	chr11	-	1644	8	FSM	ENSG00000175567.11	ENST00000663595.2	1644	8	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	27.0856540083717	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCTCCTCCCTCTCTTGT	-73980556	True	NA	-32	True	CATAAA	-16	NA	73982843	73974671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73975122_73975490_73975672_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_26782.known	chr11	-	1413	7	FSM	ENSG00000175567.11	ENST00000536983.5	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	121.494512907648	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCCCACTTGTCATCCATA	-73980543	True	NA	-69	True	NA	NA	NA	73982830	73974708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_73975122_73976640_73976743_73976822_73977018_73977885_73978097_73978252_73978478_73981475_73981633_73982720
transcript_26793.known	chr11	-	936	4	FSM	ENSG00000168014.18	ENST00000541922.2	936	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.8325958557674	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTAGAGTTTCTTATATA	-74168429	True	NA	NA	False	ATTAAA	-23	NA	74170877	74158326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74158695_74161398_74161557_74168343_74168614_74170737
transcript_26800.known	chr11	+	2496	14	FSM	ENSG00000214517.10	ENST00000398427.6	2496	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	108.76357291345	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	74166224	True	NA	20	True	AATAAA	-17	NA	74171321	74254703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246033_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_26801.known	chr11	+	2487	14	FSM	ENSG00000214517.10	ENST00000328257.13	2487	14	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_13	27.9378007376954	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	74166191	True	NA	20	True	AATAAA	-17	NA	74171288	74254703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74235900_74235967_74239132_74239257_74246075_74246206_74247078_74247124_74250953_74251019_74251647_74251716_74253491
transcript_26805.nnic	chr11	+	1733	8	NNC	ENSG00000214517.10	novel	2487	14	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	144.890951253355	213	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTCTGGTCTTTCTCTGT	74166146	True	NA	20	True	AATAAA	-17	NA	74171243	74254703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_74171523_74203727_74203822_74204352_74204446_74222311_74222370_74225204_74225257_74230244_74230400_74230911_74231003_74253792
transcript_26807.nnic	chr11	+	745	4	NNC	ENSG00000214517.10	novel	590	4	NA	NA	-23	-178	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	190.78143399072	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTTGCTACTTTTTTC	74166146	True	NA	NA	False	ATTAAA	-15	NA	74171243	74205745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_74171523_74203727_74203822_74204352_74204446_74205466
transcript_2681.nnic	chr1	-	626	5	NIC	ENSG00000236810.7	novel	583	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCCTCGAAGATCTTACA	-23777694	True	NA	NA	False	AATATA	-14	NA	23778328	23769030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_23769162_23771733_23771884_23772110_23772167_23772267_23772427_23778198
transcript_26810.known	chr11	+	590	4	FSM	ENSG00000214517.10	ENST00000542710.3	590	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	191.252596206053	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAATGTATATGTATTTA	74166169	True	NA	NA	False	AATAAA	-5	NA	74171266	74205923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74171523_74203727_74203822_74204352_74204446_74205776
transcript_26811.known	chr11	-	8477	14	FSM	ENSG00000165434.8	ENST00000298198.5	8477	14	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_7	12.934976206683	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGTTTCTGTGTAATTT	-74396499	True	NA	-5	True	AATAAA	-17	NA	74398433	74330315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74336755_74338467_74338602_74342460_74342651_74342884_74343015_74343322_74343417_74345468_74345650_74346731_74346830_74347147_74347338_74351382_74351577_74368491_74368576_74370901_74370987_74371710_74371818_74374414_74374583_74398050
transcript_26814.known	chr11	-	607	4	FSM	ENSG00000175538.11	ENST00000531854.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.09120616516523	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGACAACTCCTACATGT	-74467346	True	NA	NA	False	NA	NA	NA	74467549	74457405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74457604_74461954_74462104_74462747_74462856_74467397
transcript_26815.known	chr11	-	3064	3	FSM	ENSG00000175538.11	ENST00000310128.9	3064	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGGTGTAAGAATGAATGG	-74467346	True	NA	NA	False	AATAAA	-14	NA	74467549	74454840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74457604_74461954_74462104_74467397
transcript_26816.known	chr11	-	585	3	FSM	ENSG00000175538.11	ENST00000532569.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTATGATCTAACACGAG	NA	False	NA	NA	False	NA	NA	NA	74467729	74457265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74457604_74461954_74462104_74467631
transcript_26817.known	chr11	-	935	2	FSM	ENSG00000175538.11	ENST00000525550.1	935	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCCTTGTGCATAAGGAT	-74462343	False	NA	NA	False	GGGGCT	-9	NA	74462367	74457081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74457604_74461954
transcript_26818.known	chr11	-	663	1	FSM	ENSG00000165434.8	ENST00000622957.1	663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCATCATTGTAAGTTAT	-74396474	True	NA	NA	False	NA	NA	NA	74398408	74397745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74397700_74398400
transcript_26819.known	chr11	+	3788	12	FSM	ENSG00000077514.9	ENST00000263681.7	3788	12	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_8	29.8068160156655	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTGTATGTAGCATGA	74588883	True	NA	NA	False	AATAAA	-35	NA	74592581	74643076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74640563
transcript_26821.nic	chr11	+	1852	12	NIC	ENSG00000077514.9	novel	3788	12	NA	NA	-12	224	combination_of_known_junctions	FALSE	canonical	2	5	junction_11	78.5273548169391	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGGGGTTACTTTCTGT	74588871	True	NA	NA	False	AATAAA	-20	NA	74592569	74669341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196_74636276_74668776
transcript_26822.nic	chr11	+	1235	11	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-12	6853	-12	-4742	5prime_fragment	FALSE	canonical	3	192	junction_8	31.0515700086163	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGAAAACGCGTACTAAAATC	74588871	True	NA	NA	False	AAGAAA	-2	NA	74592569	74636223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407_74625574_74629216_74629324_74634582_74634696_74636196
transcript_26826.nic	chr11	+	873	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-12	17618	-12	6688	5prime_fragment	FALSE	canonical	3	232	junction_6	23.3998081275929	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGGAGCAGCCTACAGTG	74588871	True	NA	NA	False	AAGAAA	-4	NA	74592569	74625458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_26827.nic	chr11	+	987	8	ISM	ENSG00000077514.9	ENST00000263681.7	3788	12	-12	17504	-12	6802	5prime_fragment	FALSE	canonical	3	232	junction_6	23.3998081275929	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTAGGAAAATTTTGTTGCT	74588871	True	NA	NA	False	AAAAAG	-37	NA	74592569	74625572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_74592719_74594060_74594117_74604691_74604795_74611498_74611539_74612877_74613011_74618536_74618805_74620016_74620090_74625407
transcript_26833.known	chr11	+	2493	2	FSM	ENSG00000254837.2	ENST00000526036.1	2493	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTATCCTCAAGCTATCTC	74493031	True	NA	NA	False	TATAAA	-42	NA	74493365	74498533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74493974_74496648
transcript_26837.nnic	chr11	+	1105	2	NNC	ENSG00000241170.3	novel	648	2	NA	NA	-130625	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13132	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGCCAACACCAAGGAAA	NA	False	NA	NA	False	TATAAA	-23	NA	74745660	74920023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_74746275_74919532
transcript_26839.nnic	chr11	-	476	2	Genic_Genomic	ENSG00000227615.1	novel	399	1	NA	NA	-84	49	multi-exon	FALSE	canonical	0	0	junction_1	0	411	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCAGTTCTCAACCTGG	-74746183	False	NA	NA	False	AATAAA	-41	NA	74746198	74745666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_-_74745795_74745850
transcript_26840.known	chr11	-	399	1	FSM	ENSG00000227615.1	ENST00000428553.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7262	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAATAAATCTTTGGCTCA	-74746099	False	NA	NA	False	AAGAAA	-4	NA	74746114	74745715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74745700_74746100
transcript_26844.known	chr11	-	1016	9	FSM	ENSG00000166435.16	ENST00000528219.5	1016	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	6.29359793758705	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCCCATAAAGAGCCCCAA	-74948133	True	NA	NA	False	NA	NA	NA	74949080	74906352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_74906457_74907144_74907274_74921213_74921348_74927390_74927489_74930299_74930373_74933800_74933873_74936883_74937069_74945017_74945086_74948927
transcript_2685.nic	chr1	+	1362	4	ISM	ENSG00000011007.13	ENST00000609199.2	5075	10	-40	10152	-40	927	5prime_fragment	FALSE	canonical	3	345	junction_2	6.18241233033047	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGTGAAAACTTCAGCCAC	23738777	True	NA	-28	True	AAAAAG	-7	NA	23743407	23751871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_23743579_23749020_23749078_23749841_23749949_23750844
transcript_26851.nic	chr11	-	1003	3	ISM	ENSG00000166435.16	ENST00000534798.5	568	5	-42	5870	-2	0	5prime_fragment	FALSE	canonical	3	11	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAGAAAATTGCCTTATG	-74948186	True	NA	NA	False	AAAAAG	-5	NA	74949133	74933260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_74933873_74936883_74937069_74948927
transcript_26852.nic	chr11	-	404	2	ISM	ENSG00000166435.16	ENST00000524430.1	561	5	-168	13289	-99	-11793	5prime_fragment	FALSE	canonical	3	21	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTAAGGGGCCATTCC	NA	False	NA	NA	False	AAGAAA	-24	NA	74949299	74945053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_74945086_74948927
transcript_26855.known	chr11	+	839	6	FSM	ENSG00000118363.13	ENST00000532972.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1164.78712218156	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGCTTGGGGGGTGGGGG	74920190	True	NA	NA	False	NA	NA	NA	74949264	74977087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74963594_74963688_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_26869.known	chr11	+	321	2	FSM	ENSG00000118363.13	ENST00000527225.1	321	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTCTTTCTCCTGGAT	74920204	True	NA	NA	False	AATAAA	-18	NA	74949278	74977056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74976856
transcript_2687.known	chr1	-	1074	4	FSM	ENSG00000236810.7	ENST00000427796.6	1112	4	38	0	2	0	multi-exon	FALSE	canonical	3	10	junction_2	4.54606056566195	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGGGGAGTTCTGTGC	-23777653	True	NA	NA	False	NA	NA	NA	23778287	23760381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23772267_23772427_23778198
transcript_26870.known	chr11	+	2691	5	FSM	ENSG00000118363.13	ENST00000263672.11	2691	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1131.24378451331	6408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGCTCACGCCTTTAAT	74920191	True	NA	NA	False	ATTAAA	-21	NA	74949265	74979033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033_74965118_74965762_74965924_74969564_74969700_74976856
transcript_26871.known	chr11	+	772	4	FSM	ENSG00000118363.13	ENST00000526361.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_2	1155.79131142069	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTATAGCTTTGGGCCAT	74920189	True	NA	NA	False	NA	NA	NA	74949263	74977348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033_74965118_74969639_74969700_74976856
transcript_26872.known	chr11	+	612	4	FSM	ENSG00000118363.13	ENST00000530257.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_2	1170.27356725777	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCCTGAAATTTTA	74920186	True	NA	NA	False	GATAAA	-43	NA	74949260	74977156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033_74965118_74969610_74969700_74976856
transcript_26873.known	chr11	+	265	2	FSM	ENSG00000118363.13	ENST00000527290.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	2827	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGGAAATCTTTTCCTT	74920196	True	NA	NA	False	NA	NA	NA	74949270	74965169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74949400_74965033
transcript_26875.nic	chr11	+	410	3	NIC	ENSG00000162139.10	novel	431	2	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGAGTGGTTCTTCA	74988636	False	NA	NA	False	ATTAAA	-37	NA	74988653	74990163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_74988726_74989017_74989155_74989962
transcript_26877.known	chr11	+	431	2	FSM	ENSG00000162139.10	ENST00000526068.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGAGTGGTTCTTCA	74987339	True	NA	NA	False	ATTAAA	-37	NA	74988924	74990163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74989155_74989962
transcript_26878.known	chr11	+	746	2	FSM	ENSG00000162139.10	ENST00000534628.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCCAGAGACCTCCACA	74987358	True	NA	NA	False	AATAAA	-31	NA	74988943	74995043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74989155_74994508
transcript_26879.known	chr11	+	5929	3	FSM	ENSG00000162139.10	ENST00000294064.9	5929	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTTTTTTTTCTTA	74987347	True	NA	18	True	AATAAA	-18	NA	74988932	75010907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_74989155_74994508_74994721_75005412
transcript_26882.known	chr11	-	7352	16	FSM	ENSG00000137486.17	ENST00000420843.7	7352	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	51.4321127528534	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGCTGTGCTTTCATTT	-75347841	True	NA	-1	True	AATAAA	-35	NA	75351661	75260121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75271700_75271725_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_26886.known	chr11	-	1895	15	FSM	ENSG00000137486.17	ENST00000360025.7	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	25.2881354773018	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCTCTGTGTCTGATAGT	-75347885	True	NA	2	True	NA	NA	NA	75351705	75265598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75266275_75267651_75267704_75268888_75268960_75272894_75272979_75274073_75274212_75276838_75276912_75277363_75277449_75278608_75278745_75281074_75281143_75281961_75282022_75283286_75283484_75284234_75284280_75287314_75287376_75290008_75290040_75351587
transcript_2689.known	chr1	-	940	4	FSM	ENSG00000236810.7	ENST00000664563.2	970	4	28	2	-6	-2	multi-exon	FALSE	canonical	3	11	junction_2	4.10960933531265	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-23777662	True	NA	-23	True	ATTAAA	-18	NA	23778296	23760520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23772271_23772427_23778198
transcript_26917.known	chr11	+	903	6	FSM	ENSG00000149273.15	ENST00000422465.6	903	6	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	8348.73916229271	7023	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCCTGTAGTTCAGGAT	75275786	True	NA	-90	True	NA	NA	NA	75399519	75405884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_2693.nnic	chr1	-	848	4	NNC	ENSG00000236810.7	novel	1112	4	NA	NA	-3	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.10433352249844	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCAACATAGCATTACAG	-23777694	True	NA	-112	True	AATAAA	-17	NA	23778328	23760609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_23761152_23772110_23772167_23772306_23772427_23778198
transcript_26937.known	chr11	+	2059	7	FSM	ENSG00000149273.15	ENST00000531188.6	2059	7	0	0	0	0	multi-exon	FALSE	canonical	3	11487	junction_6	3654.23227991264	93318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTAAGGATGTGCCTAGGT	75275784	True	NA	12	True	ATTAAA	-23	NA	75399517	75406907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_26938.known	chr11	+	796	7	FSM	ENSG00000149273.15	ENST00000530721.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	7753.57908037027	10630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275785	True	NA	44	True	AATAAA	-20	NA	75399518	75405692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400778_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75405613
transcript_26939.known	chr11	+	1306	7	FSM	ENSG00000149273.15	ENST00000527446.5	1306	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	7818.27426965539	1200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAATTTCTGTTGTCTATA	75275797	True	NA	NA	False	NA	NA	NA	75399530	75422280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671_75404869_75421726
transcript_26940.known	chr11	+	1373	5	FSM	ENSG00000149273.15	ENST00000529173.5	1373	5	0	0	0	0	multi-exon	FALSE	canonical	3	19144	junction_1	697.654821527093	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAGCATAACAGGTATGTC	75275781	True	NA	NA	False	NA	NA	NA	75399514	75404855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75402447_75404019_75404208_75404671
transcript_26941.known	chr11	+	473	5	FSM	ENSG00000149273.15	ENST00000528439.5	473	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8216.37695398647	1745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275784	True	NA	44	True	AATAAA	-20	NA	75399517	75405692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404759_75404869_75405613
transcript_26942.known	chr11	+	771	7	FSM	ENSG00000149273.15	ENST00000526248.5	771	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7983.56724779093	6734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275823	True	NA	44	True	AATAAA	-20	NA	75399556	75405692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404053_75404208_75404671_75404869_75405613
transcript_26943.known	chr11	+	737	6	FSM	ENSG00000149273.15	ENST00000532872.5	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_3	7902.9198047304	7416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTGACTAGACTGTTCAG	75275796	True	NA	44	True	AATAAA	-20	NA	75399529	75405692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75404019_75404208_75404671_75404869_75405613
transcript_26944.known	chr11	+	564	6	FSM	ENSG00000149273.15	ENST00000534440.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8408.96243302347	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGACACAAGGTCTGAC	75275797	True	NA	32	True	AATAAA	-8	NA	75399530	75405680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402380_75404671_75404869_75405613
transcript_26945.known	chr11	+	866	6	FSM	ENSG00000149273.15	ENST00000524851.5	866	6	0	0	0	0	multi-exon	FALSE	canonical	3	19144	junction_1	1326.1771525705	1074	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAATACAAGTTGAAAC	75275809	True	NA	NA	False	AATAAA	-24	NA	75399542	75404994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401734_75402351_75402447_75404019_75404208_75404671
transcript_26946.known	chr11	+	710	6	FSM	ENSG00000149273.15	ENST00000526608.5	710	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8085.51468739004	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTCTGCAAGGGCAGGG	75275803	True	NA	NA	False	NA	NA	NA	75399536	75404868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75399578_75400693_75400825_75401639_75401726_75402379_75402447_75404019_75404208_75404671
transcript_26947.known	chr11	+	531	5	FSM	ENSG00000149273.15	ENST00000530170.1	531	5	0	0	0	0	multi-exon	FALSE	canonical	2	597	junction_3	8871.69548338986	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTGGAGTCTGGATG	75398769	True	NA	-20	True	NA	NA	NA	75400694	75405628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75400825_75401639_75401734_75402351_75402447_75404671_75404869_75405613
transcript_26948.known	chr11	-	3222	18	FSM	ENSG00000158555.15	ENST00000529721.5	3222	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	5.68735621895144	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTTGTCTCTGAATTG	-75490698	True	NA	-4	True	ATTAAA	-14	NA	75490751	75434639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75435656_75436935_75437049_75439878_75439962_75441162_75441311_75441645_75441804_75442362_75442582_75443135_75443287_75444412_75444496_75448976_75449123_75449516_75449611_75449884_75449984_75456756_75456817_75457692_75457787_75462785_75462890_75477618_75477796_75479243_75479489_75490236_75490321_75490603
transcript_26956.known	chr11	+	2299	6	FSM	ENSG00000149257.16	ENST00000533603.5	2299	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	943.74458409042	9229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	75562034	False	NA	26	True	AATAAA	-16	NA	75562055	75572783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75562320_75563726_75563771_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_26958.known	chr11	+	2058	5	FSM	ENSG00000149257.16	ENST00000358171.8	2058	5	0	0	0	0	multi-exon	FALSE	canonical	3	1821	junction_4	136.844802604995	9966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTGGAGCGTGGAAGA	75515548	True	NA	26	True	AATAAA	-16	NA	75562252	75572783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75562320_75566315_75566972_75568730_75568830_75568938_75569172_75571780
transcript_26961.known	chr11	+	651	2	FSM	ENSG00000255326.1	ENST00000527803.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAAAACACATGGCTGGTG	75583166	True	NA	NA	False	NA	NA	NA	75583195	75594665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75583282_75594100
transcript_26963.known	chr11	+	3152	9	FSM	ENSG00000198382.9	ENST00000531818.5	3152	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	26.9835019039412	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGACCTGATTTTTTTTTA	75979000	True	NA	2	True	AATAAA	-17	NA	75979525	76142651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_75980039_75983386_75983514_76004004_76004090_76007533_76007622_76008806_76008868_76016814_76016981_76065709_76065789_76115923_76116016_76140710
transcript_26965.known	chr11	-	683	2	FSM	ENSG00000255507.7	ENST00000531263.2	713	2	30	0	-13	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACCTGGCATATAGTAGTT	-75814764	True	NA	NA	False	ATTAAA	-31	NA	75814797	75813513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_75813862_75814462
transcript_26972.nnic	chr11	-	622	3	NNC	ENSG00000255362.1	novel	388	3	NA	NA	-20851	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGTCCCCCTTTGTAACT	-76236831	True	NA	NA	False	AGTAAA	-16	NA	76236876	76210955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_76211250_76215224_76215293_76236616
transcript_26975.nic	chr11	+	1013	3	NIC	ENSG00000179240.13	novel	8085	3	NA	NA	-2	13	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTATTTATTTACTT	76380722	True	NA	14	True	TATAAA	-20	NA	76381320	76404113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_76381375_76381788_76382294_76403659
transcript_26976.nnic	chr11	+	1166	3	NNC	ENSG00000179240.13	novel	608	2	NA	NA	-2	3	intron_retention	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGATTTTATGGTAATT	76380722	True	NA	NA	False	AATAAA	-45	NA	76381320	76395102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_76382294_76394597_76394662_76394973
transcript_26981.nic	chr11	+	642	2	ISM	ENSG00000179240.13	ENST00000531207.5	4228	4	-126	10506	-116	13	5prime_fragment	FALSE	canonical	2	6	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTATTTATTTACTT	NA	False	NA	14	True	TATAAA	-20	NA	76381186	76404113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_76381375_76403659
transcript_26982.known	chr11	+	5444	2	FSM	ENSG00000179240.13	ENST00000529331.2	5444	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATGTGTTTTACTGGGAG	76380724	True	NA	NA	False	ATTAAA	-21	NA	76381322	76408132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382294_76403659
transcript_26983.known	chr11	+	5363	2	FSM	ENSG00000179240.13	ENST00000321844.6	5363	2	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTTTTACTGGGAGAAAA	76380726	True	NA	NA	False	ATTAAA	-25	NA	76381324	76408136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382211_76403659
transcript_26984.known	chr11	+	608	2	FSM	ENSG00000179240.13	ENST00000531785.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAGGGATTTTATGGTA	76381213	False	NA	NA	False	AATAAA	-42	NA	76381811	76395099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382294_76394973
transcript_26985.known	chr11	+	4228	4	FSM	ENSG00000179240.13	ENST00000531207.5	4228	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	76380714	True	NA	NA	False	NA	NA	NA	76381312	76414619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76381375_76403659_76403922_76408476_76408623_76410861
transcript_26986.known	chr11	+	2041	2	FSM	ENSG00000179240.13	ENST00000530460.2	2041	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACATCTCCATTTTGTT	76380706	True	NA	1	True	TATAAA	-7	NA	76381304	76404100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76382905_76403659
transcript_26991.known	chr11	-	664	2	FSM	ENSG00000255135.5	ENST00000658868.1	664	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCCGTCTCAAAA	-76442157	True	NA	NA	False	NA	NA	NA	76444673	76435558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76435827_76444277
transcript_26992.known	chr11	-	599	2	FSM	ENSG00000255135.5	ENST00000530759.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_1	0	2669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATCTGTTCCCCTTTGCTG	-76442058	True	NA	NA	False	AATAAA	-21	NA	76444574	76441337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76441640_76444277
transcript_26993.known	chr11	-	738	2	FSM	ENSG00000255135.5	ENST00000572035.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTTTTTAAAAAAGAAAT	-76442140	True	NA	NA	False	AATAAA	-5	NA	76444656	76441353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76441640_76444204
transcript_26995.known	chr11	+	934	4	FSM	ENSG00000158636.16	ENST00000533988.5	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	1.69967317119759	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTCTGATCATTATAA	76442856	True	NA	20	True	AATAAA	-23	NA	76445021	76453931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313
transcript_26996.known	chr11	+	840	2	FSM	ENSG00000158636.16	ENST00000531998.1	840	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTTTTGCCATTTATA	NA	False	NA	NA	False	AATAAA	-18	NA	76513396	76516842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76513536_76516141
transcript_26997.known	chr11	+	4015	19	FSM	ENSG00000158636.16	ENST00000524490.5	4015	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	11.4987922071069	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAATGAAAAAGAAA	76442859	True	NA	NA	False	GATAAA	-25	NA	76445024	76550343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76445129_76446899_76447009_76451857_76451958_76453313_76453389_76458182_76458359_76459932_76460086_76463820_76464081_76472563_76472841_76513385_76513536_76516141_76516313_76523154_76523292_76526461_76526636_76528267_76528467_76535894_76536060_76537794_76537951_76542215_76542368_76544258_76544823_76545796_76546298_76549951
transcript_26998.nic	chr11	-	697	3	NIC	ENSG00000137507.11	novel	2656	4	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTATAACCTACCTGAATG	-76670674	True	NA	NA	False	NA	NA	NA	76670757	76657569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_76658035_76665870_76665959_76670613
transcript_26999.known	chr11	-	573	2	FSM	ENSG00000204529.4	ENST00000526984.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTACTTCCATTCATTTATT	NA	False	NA	NA	False	NA	NA	NA	76704479	76703273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76703528_76704160
transcript_27.known	ERCC-00060	+	506	1	FSM	ERCC-00060A	DQ516763	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00060_+_0_500
transcript_27001.known	chr11	+	2585	2	FSM	ENSG00000182704.8	ENST00000333090.5	2585	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTTTACTCAGCCAGT	76780302	True	NA	28	True	AATAAA	-15	NA	76783355	76798144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76783405_76795608
transcript_27004.known	chr11	-	296	2	FSM	ENSG00000255100.1	ENST00000526585.1	296	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTCTATTCCCCCTGCTG	-76782879	True	NA	NA	False	NA	NA	NA	76783059	76782629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76782857_76782990
transcript_27005.known	chr11	-	293	2	FSM	ENSG00000255100.1	ENST00000527778.1	293	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGCAGTTTCAGTCTATT	-76782880	True	NA	NA	False	NA	NA	NA	76783060	76782639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_76782857_76782984
transcript_27008.known	chr11	+	7333	11	FSM	ENSG00000078124.13	ENST00000532485.6	7333	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	7.87464284904401	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGGTAGTGTTTCATCC	76859485	True	NA	NA	False	ATTAAA	-26	NA	76860917	77026797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76861080_76926556_76926668_76958978_76959032_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_27011.known	chr11	+	1292	10	FSM	ENSG00000078124.13	ENST00000531461.5	1292	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	26.9874227679177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGGTAAAAAAAGAGAGAG	76859503	True	NA	NA	False	NA	NA	NA	76860935	77020827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_76861080_76926556_76926668_76976288_76976342_76985642_76985725_76990538_76990575_76998762_76998822_77015015_77015118_77016674_77016780_77019730_77019777_77020273
transcript_27014.nic	chr11	+	400	2	ISM	ENSG00000078124.13	ENST00000525194.5	846	11	-18	148344	0	-112318	5prime_fragment	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGTGTACAAAAGAGTTT	76859473	True	NA	NA	False	AATGAA	-20	NA	76860905	76868345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_76861080_76868119
transcript_27015.nic	chr11	+	1098	2	ISM	ENSG00000078124.13	ENST00000525194.5	846	11	-18	147646	0	-111620	5prime_fragment	FALSE	canonical	3	10	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCTGGGTTCTGTAAGC	76859473	True	NA	9	True	AATAAA	-13	NA	76860905	76869043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_76861080_76868119
transcript_2702.nic	chr1	-	810	3	FSM	ENSG00000236810.7	ENST00000686609.1	808	3	-8	6	3	-2	multi-exon	FALSE	canonical	0	0	junction_2	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAAGTTGCCTTCAGGGC	-23777687	True	NA	-23	True	ATTAAA	-18	NA	23778321	23760520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23761152_23772110_23772167_23778198
transcript_27020.nic	chr11	-	3221	16	NIC	ENSG00000149269.10	novel	2543	16	NA	NA	32	-3	combination_of_known_junctions	FALSE	canonical	3	124	junction_1	290.035553376172	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTATTGGAGTATGCCTTT	-77412022	False	NA	-12	True	AATAAA	-15	NA	77412032	77322019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_27021.known	chr11	-	2543	16	FSM	ENSG00000149269.10	ENST00000278568.8	2543	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	280.211221918197	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCACAATTAATTCTTGACT	-77474046	False	NA	10	True	NA	NA	NA	77474060	77322947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77323361_77325327_77325377_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_27027.nic	chr11	-	3175	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	32	0	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77412022	False	NA	-9	True	AATAAA	-18	NA	77412032	77322016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_27028.known	chr11	-	3459	15	FSM	ENSG00000149269.10	ENST00000356341.8	3459	15	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_14	136.808838030536	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77474080	False	NA	-9	True	AATAAA	-18	NA	77474094	77322016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77473551
transcript_27030.nic	chr11	-	2291	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	32	47	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATTTGTAATCAATTGAG	-77412022	False	NA	-24	True	TATAAA	-21	NA	77412032	77322900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_27034.nic	chr11	-	2208	15	NIC	ENSG00000149269.10	novel	3001	15	NA	NA	32	-36	combination_of_known_junctions	FALSE	canonical	3	325	junction_14	161.715673896111	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGTCAAAATCCTCACC	-77412022	False	NA	-26	True	AATAAA	-15	NA	77412032	77322983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_77323361_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_27037.known	chr11	-	3001	15	FSM	ENSG00000149269.10	ENST00000530617.5	3001	15	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	266.624056969925	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGAGTATGCCTTTCTT	-77412054	False	NA	-9	True	AATAAA	-18	NA	77412064	77322016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77323155_77332729_77332868_77336085_77336283_77337323_77337424_77340645_77340764_77343818_77343932_77349238_77349288_77353535_77353600_77355667_77355843_77358897_77359018_77374327_77374366_77379240_77379389_77379893_77379995_77392330_77392542_77411773
transcript_27055.known	chr11	-	1121	6	FSM	ENSG00000074201.9	ENST00000525064.5	1121	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	392.652008781313	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	-77617903	True	NA	4	True	NA	NA	NA	77637772	77616194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77616696_77619605_77619696_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_27056.known	chr11	-	1172	6	FSM	ENSG00000074201.9	ENST00000263309.7	1172	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	402.280001988665	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTGTAATAGCTTAACA	-77617882	True	NA	4	True	NA	NA	NA	77637751	77616194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77616696_77619605_77619696_77622499_77622674_77624962_77625071_77629762_77629900_77637589
transcript_27057.known	chr11	-	953	7	FSM	ENSG00000074201.9	ENST00000528364.1	953	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	362.238142969818	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTATGATTTATATTTTC	-77617907	True	NA	NA	False	NA	NA	NA	77637776	77618532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77618688_77619605_77619696_77622499_77622674_77624962_77625071_77625716_77625819_77629762_77629900_77637589
transcript_27058.known	chr11	+	1202	4	FSM	ENSG00000178301.4	ENST00000528638.1	1202	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.01387685344754	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATATAATAAAACAAAACACC	NA	False	NA	NA	False	AATAGA	-42	NA	77589390	77610009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77589681_77590528_77590612_77603555_77603673_77609297
transcript_2706.known	chr1	+	1590	6	FSM	ENSG00000057757.10	ENST00000246151.9	1590	6	0	0	0	0	multi-exon	TRUE	canonical	3	367	junction_4	32.7377457990009	567	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTATTTTCTTTTGAG	23768532	True	NA	17	True	AATAAA	-17	NA	23778417	23788232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23778714_23779437_23779482_23779863_23779942_23785674_23785780_23786314_23786424_23787274
transcript_27060.known	chr11	+	1835	3	FSM	ENSG00000178301.4	ENST00000313578.4	1835	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTAGAAGGCTTCTTTTA	77589827	True	NA	NA	False	TTTAAA	-19	NA	77589952	77610356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77590612_77603555_77603673_77609297
transcript_27068.known	chr11	-	2107	6	FSM	ENSG00000048649.14	ENST00000528095.5	2107	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	8.78635305459552	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAATTCAAATATAAGTTG	-77819992	False	NA	NA	False	NA	NA	NA	77820711	77701118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_27076.nic	chr11	-	1028	5	ISM	ENSG00000048649.14	ENST00000528095.5	2107	6	-326	24454	-168	0	5prime_fragment	FALSE	canonical	3	136	junction_1	8.07774721070176	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGAGGAAGAAACACC	NA	False	NA	-38	True	NA	NA	NA	77821037	77725572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_27077.known	chr11	-	520	2	FSM	ENSG00000048649.14	ENST00000530604.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGAGGTGAAAGTCACC	-77819980	False	NA	NA	False	NA	NA	NA	77820699	77813353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77813702_77820527
transcript_27078.known	chr11	-	11242	16	FSM	ENSG00000048649.14	ENST00000308488.11	11242	16	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_10	14.0658767550725	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTAGCATGATGTGTTT	-77817905	True	NA	-12	True	AATAAA	-15	NA	77820722	77660008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77667492_77672041_77672231_77675035_77675257_77676791_77677000_77678085_77678154_77683709_77683820_77685104_77685160_77691158_77691239_77693506_77693612_77698486_77698694_77700720_77702496_77725544_77725700_77740730_77740937_77747035_77747129_77764597_77764690_77820527
transcript_27081.known	chr11	-	3146	23	FSM	ENSG00000149262.17	ENST00000534064.6	3146	23	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_15	16.7179445333895	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTAGTTCCTGGTCT	-77991812	True	NA	-2	True	AATAAA	-17	NA	77994668	77878719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77879128_77883831_77883953_77891318_77891463_77891680_77891841_77894289_77894350_77901420_77901552_77903539_77903621_77907716_77907811_77918820_77918979_77921339_77921474_77922355_77922472_77924749_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_27087.known	chr11	-	1845	12	FSM	ENSG00000149262.17	ENST00000529807.5	1845	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_4	9.52855647145737	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTATATAGTGTTTT	-77991810	True	NA	NA	False	AATAAA	-17	NA	77994666	77924441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77924893_77928341_77928548_77938650_77938826_77941179_77941252_77955941_77956063_77958745_77958835_77960340_77960392_77960952_77961139_77978995_77979103_77981458_77981577_77991107_77991300_77994589
transcript_27093.known	chr11	-	956	3	FSM	ENSG00000149262.17	ENST00000527522.1	956	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	86	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTGGTGAAGACTCT	-77991814	True	NA	-6	True	AATAAA	-44	NA	77994670	77987015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_77987699_77991107_77991300_77994589
transcript_27120.known	chr11	+	531	4	FSM	ENSG00000087884.15	ENST00000393427.7	522	4	0	-9	0	7	multi-exon	FALSE	canonical	3	243	junction_1	41.0717529317765	4087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACTCACCATTCTCCA	77819163	True	NA	24	True	AATAAA	-24	NA	77821143	77872361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77872174
transcript_27121.known	chr11	+	579	5	FSM	ENSG00000087884.15	ENST00000526415.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	110.384555079051	2527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819148	True	NA	15	True	AATAAA	-15	NA	77821128	77872352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77841018_77841061_77842478_77842629_77869721_77869818_77872174
transcript_27122.known	chr11	+	726	5	FSM	ENSG00000087884.15	ENST00000526164.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	138.674754371515	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCCAGTTATCTGAAAGTC	77819133	True	NA	NA	False	AATAAA	-34	NA	77821113	77900785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77842478_77842629_77869721_77869818_77884779_77884917_77900570
transcript_27123.known	chr11	+	606	5	FSM	ENSG00000087884.15	ENST00000533193.5	606	5	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_2	132.599726621136	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGACTGTCACTCACCA	NA	False	NA	17	True	AATAAA	-17	NA	77841018	77872354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77841061_77842478_77842629_77855344_77855483_77869721_77869818_77872174
transcript_27124.known	chr11	+	421	4	FSM	ENSG00000087884.15	ENST00000525409.5	421	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	45.3210767744986	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGTGACTGTCACTCAC	77819206	True	NA	15	True	AATAAA	-15	NA	77821186	77872352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821238_77841018_77841061_77842478_77842629_77872174
transcript_27125.known	chr11	+	458	3	FSM	ENSG00000087884.15	ENST00000531855.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATTTAAACATGAGTTT	77819161	True	NA	NA	False	NA	NA	NA	77821141	77841255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_77821242_77831891_77832013_77841018
transcript_27128.known	chr11	-	495	3	FSM	ENSG00000151366.13	ENST00000525085.1	495	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1796.5	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTACTCTGACTCTTTAT	-78041706	True	NA	-20	True	ATTAAA	-11	NA	78079819	78069857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78070037_78072997_78073073_78079578
transcript_27130.known	chr11	+	277	2	FSM	ENSG00000254675.1	ENST00000526730.1	277	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTTGAATCCCGTTATT	78022922	False	NA	NA	False	AATAAA	-13	NA	78022932	78023721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_78023022_78023533
transcript_27131.known	chr11	-	1673	2	FSM	ENSG00000151364.17	ENST00000353172.6	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	528	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCAGTTTTGGTTCTGCT	-78020998	True	NA	-5	True	AATAAA	-15	NA	78023276	78015714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78017271_78023159
transcript_27132.known	chr11	-	422	2	FSM	ENSG00000151366.13	ENST00000534029.5	422	2	0	0	0	0	multi-exon	FALSE	canonical	2	40	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACTCTGACTCTTTATTG	-78041706	True	NA	-18	True	ATTAAA	-13	NA	78079819	78069855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78070037_78079578
transcript_27133.known	chr11	-	2168	3	FSM	ENSG00000151366.13	ENST00000281031.5	2168	3	0	0	0	0	multi-exon	FALSE	canonical	3	3593	junction_1	228.5	10579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTTGATCTCATCAG	-78041749	True	NA	0	True	AATAAA	-19	NA	78079862	78068296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78070037_78072997_78073142_78079578
transcript_27136.known	chr11	-	1727	14	FSM	ENSG00000159063.14	ENST00000679986.1	1727	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	366.608395943589	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133900	True	NA	-12	True	AATAAA	-14	NA	78139602	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78127357_78127437_78135229_78135348_78139493
transcript_27138.known	chr11	-	1681	14	FSM	ENSG00000159063.14	ENST00000525761.3	1681	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	333.617096180495	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-78133928	True	NA	-30	True	AAGAAA	-7	NA	78139630	78100963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709_78138768_78139493
transcript_27140.known	chr11	-	2387	13	FSM	ENSG00000159063.14	ENST00000681351.1	2387	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	341.239977467796	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133924	True	NA	-12	True	AATAAA	-14	NA	78139626	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138709
transcript_27143.known	chr11	-	2443	13	FSM	ENSG00000159063.14	ENST00000681575.1	2443	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	299.512509013489	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133942	True	NA	-12	True	AATAAA	-14	NA	78139644	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78138705
transcript_27144.known	chr11	-	1605	13	FSM	ENSG00000159063.14	ENST00000680761.1	1605	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	298.22782119268	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133917	True	NA	-2	True	AATAAA	-24	NA	78139619	78100935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139528
transcript_27148.known	chr11	-	1633	13	FSM	ENSG00000159063.14	ENST00000679648.1	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	378.260675842585	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTAGATATGTGCCAAGC	-78133936	True	NA	-20	True	AATAAA	-6	NA	78139638	78100953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124024_78124215_78139493
transcript_2715.nic	chr1	+	1633	10	NIC	ENSG00000011009.11	novel	717	9	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	637.72688530978	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	23770531	False	NA	15	True	ATTAAA	-17	NA	23791913	23795539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_23792018_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_27152.known	chr11	-	1398	12	FSM	ENSG00000159063.14	ENST00000530608.6	1398	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	306.768790637331	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133886	True	NA	-12	True	AATAAA	-14	NA	78139588	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124093_78139493
transcript_27153.known	chr11	-	1566	12	FSM	ENSG00000159063.14	ENST00000525783.6	1566	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	305.054635399157	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133922	True	NA	-2	True	AATAAA	-24	NA	78139624	78100935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78139493
transcript_27188.known	chr11	-	1355	11	FSM	ENSG00000159063.14	ENST00000679697.1	1355	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	325.739159451239	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133922	True	NA	-12	True	AATAAA	-14	NA	78139624	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27189.known	chr11	-	1471	12	FSM	ENSG00000159063.14	ENST00000529139.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	313.814784559722	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATTATTTCATGGGAAAT	-78133922	True	NA	-2	True	AATAAA	-24	NA	78139624	78100935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27190.known	chr11	-	1677	14	FSM	ENSG00000159063.14	ENST00000376156.7	1677	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	334.172137904223	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTGCCAAGCAATTATT	-78133890	True	NA	-13	True	AATAAA	-13	NA	78139592	78100946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27191.known	chr11	-	1515	13	FSM	ENSG00000159063.14	ENST00000680399.1	1515	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	376.116190676351	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATAAAGGAACTGCTTAG	-78133922	True	NA	-33	True	AAGAAA	-4	NA	78139624	78100966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78102873_78102949_78103979_78104053_78104355_78104454_78106806_78106913_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27192.known	chr11	-	1497	12	FSM	ENSG00000159063.14	ENST00000680467.1	1497	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	317.398021626209	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133924	True	NA	-12	True	AATAAA	-14	NA	78139626	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27193.known	chr11	-	1320	11	FSM	ENSG00000159063.14	ENST00000532306.6	1320	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.348437259812	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-78133886	True	NA	-30	True	AAGAAA	-7	NA	78139588	78100963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27194.known	chr11	-	1636	13	FSM	ENSG00000159063.14	ENST00000680256.1	1636	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	299.144741536416	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133920	True	NA	-12	True	AATAAA	-14	NA	78139622	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127440_78139493
transcript_27195.known	chr11	-	1637	13	FSM	ENSG00000159063.14	ENST00000680866.1	1637	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	302.642895542291	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133958	True	NA	-12	True	AATAAA	-14	NA	78139660	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106913_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27196.known	chr11	-	1426	12	FSM	ENSG00000159063.14	ENST00000680459.1	1426	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	312.290895329635	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133907	True	NA	-12	True	AATAAA	-14	NA	78139609	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78127357_78127437_78139493
transcript_27197.known	chr11	-	1202	8	FSM	ENSG00000159063.14	ENST00000530454.6	1202	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	291.220934434771	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGTAATTTTTGCCTTA	-78133924	True	NA	NA	False	AATAAA	-17	NA	78139626	78112383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27198.known	chr11	-	1539	13	FSM	ENSG00000159063.14	ENST00000526849.6	1539	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	307.162947617203	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGCCAAGCAATTATTT	-78133922	True	NA	-12	True	AATAAA	-14	NA	78139624	78100945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119236_78121146_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27199.known	chr11	-	1667	14	FSM	ENSG00000159063.14	ENST00000532440.6	1667	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	343.598964667692	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAGGAACTGCTTAGATA	-78133924	True	NA	-30	True	AAGAAA	-7	NA	78139626	78100963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78103979_78104053_78104355_78104454_78106806_78106947_78107716_78107765_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27200.known	chr11	-	1289	10	FSM	ENSG00000159063.14	ENST00000525870.6	1289	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	340.194425165346	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGCCAAGCAATTATTTC	-78133886	True	NA	-11	True	AATAAA	-15	NA	78139588	78100944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78101196_78109441_78109582_78112649_78112771_78113885_78113990_78114265_78114393_78119181_78119250_78121064_78121175_78124020_78124215_78127357_78127437_78139493
transcript_27209.known	chr11	-	2512	14	FSM	ENSG00000137513.10	ENST00000281038.10	2512	14	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_13	64.1241399587066	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCTATGGAAAAAAAGTTATA	-78569008	True	NA	-17	True	AATAAA	-21	NA	78574864	78435967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78436815_78441090_78441118_78443660_78443759_78465875_78466014_78469246_78469314_78478437_78478476_78478584_78478684_78493062_78493196_78528841_78528937_78559538_78559620_78566131_78566273_78568631_78568753_78571334_78571445_78574347
transcript_27210.known	chr11	-	725	2	FSM	ENSG00000137513.10	ENST00000529771.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTAAGGTCTTAATTGAT	NA	False	NA	2	True	ATTAAA	-19	NA	78443759	78436188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_78436815_78443660
transcript_27212.known	chr11	-	3318	9	FSM	ENSG00000137509.12	ENST00000679623.1	3318	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	94.0750199309041	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	-82901518	True	NA	-115	True	AATATA	-37	NA	82901601	82823043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901468
transcript_27213.known	chr11	-	3327	9	FSM	ENSG00000137509.12	ENST00000679387.1	3327	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	94.0750199309041	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	-82901547	True	NA	-115	True	AATATA	-37	NA	82901630	82823043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901488
transcript_27214.known	chr11	-	3333	9	FSM	ENSG00000137509.12	ENST00000680566.1	3333	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	93.1061222476804	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCTAAGGTTTAATTTTAA	NA	False	NA	-115	True	AATATA	-37	NA	82901740	82823043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82901592
transcript_27215.known	chr11	-	3489	9	FSM	ENSG00000137509.12	ENST00000313010.8	3489	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_7	20.1459518266077	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGAGACTTGAGTGCT	-82894667	True	NA	-7	True	AATAAA	-30	NA	82900430	82822935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82825123_82838386_82838575_82839260_82839426_82849048_82849219_82849913_82850072_82850323_82850506_82853176_82853279_82859976_82860118_82900234
transcript_27217.known	chr11	+	3524	6	FSM	ENSG00000165490.13	ENST00000533655.6	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_5	22.630952255705	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTCTTTTTTAATTGTT	82898449	True	NA	18	True	AATAAA	-18	NA	82901735	82934659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_82901823_82913286_82913387_82914722_82914852_82928776_82928939_82930156_82930275_82931731
transcript_2722.known	chr1	+	717	9	FSM	ENSG00000011009.11	ENST00000492577.1	717	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	877.774093588436	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGCTGCCTCCTGTCTAA	23790460	True	NA	NA	False	NA	NA	NA	23791970	23794712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23792018_23792656_23792761_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_27220.nnic	chr11	+	716	4	NNC	ENSG00000165490.13	novel	3278	4	NA	NA	-11	-2394	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	101.21594077351	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAAAACTGCTATTCTG	82898432	True	NA	NA	False	ATTAAA	-19	NA	82901718	82926495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_82901823_82913286_82913387_82914722_82914852_82926112
transcript_27223.known	chr11	-	9859	5	FSM	ENSG00000137502.10	ENST00000527633.6	9859	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	3.76662979332984	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAGAATCATATGCCAT	-83071261	True	NA	NA	False	AATAAA	-19	NA	83071897	82973132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82982416_82987586_82987771_82994038_82994123_82997223_82997325_83071690
transcript_27228.known	chr11	-	3746	5	FSM	ENSG00000137502.10	ENST00000534141.5	3746	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5099960031968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTCAGTTTCCAGTGA	-83071287	True	NA	-4	True	AATAAA	-22	NA	83071923	82979267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_82982416_82987590_82987771_82994038_82994123_82997223_82997325_83071690
transcript_27240.known	chr11	+	2467	3	FSM	ENSG00000246067.9	ENST00000656330.1	2467	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	10	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCCCGGGCAATAACAGCA	83069846	True	NA	NA	False	NA	NA	NA	83072051	83075492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072147_83072622_83072805_83073302
transcript_27245.known	chr11	+	563	3	FSM	ENSG00000246067.9	ENST00000501011.8	572	3	6	3	0	0	multi-exon	FALSE	canonical	3	30	junction_1	51	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCTTCTGTGTCATGTTT	83069897	True	NA	16	True	NA	NA	NA	83072102	83073604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072182_83072622_83072805_83073302
transcript_27249.known	chr11	+	597	2	FSM	ENSG00000246067.9	ENST00000534499.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTGAAACCAAAGTTAATT	83069916	True	NA	NA	False	GATAAA	-19	NA	83072121	83073194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072147_83072622
transcript_27253.known	chr11	+	825	2	FSM	ENSG00000246067.9	ENST00000533708.1	825	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCCTTCCCTTTTGCAT	83069912	True	NA	-32	True	NA	NA	NA	83072117	83073383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072182_83072622
transcript_27256.known	chr11	+	1487	1	FSM	ENSG00000246067.9	ENST00000663168.1	1487	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTTTCAAAAAATGATC	83069897	True	NA	1	True	NA	NA	NA	83072102	83073589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83072100_83073600
transcript_27257.known	chr11	+	2514	12	FSM	ENSG00000137494.14	ENST00000260047.10	2514	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	14.80841842326	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGACTCAGTTGTGCACC	83193235	False	NA	NA	False	ATTAAA	-25	NA	83193875	83256099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83194729_83198478_83198643_83206057_83206166_83210299_83210417_83211294_83211431_83224854_83225056_83227746_83227873_83236403_83236510_83240758_83240935_83245497_83245625_83247942_83248088_83255844
transcript_27267.known	chr11	+	7677	16	FSM	ENSG00000165494.12	ENST00000298281.8	7677	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	34.0446765295251	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCTGGTGCAATGGGT	NA	False	NA	NA	False	NA	NA	NA	83156987	83187451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83157632_83161326_83161453_83163678_83163868_83164206_83164402_83165599_83166715_83167124_83167309_83167414_83167506_83168427_83169996_83171817_83171915_83177084_83177205_83177713_83177820_83181007_83181192_83181853_83182010_83182398_83182492_83183037_83183074_83184678
transcript_27271.known	chr11	-	1986	9	FSM	ENSG00000137500.10	ENST00000529611.5	1986	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_8	245.374076666628	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAAAGTTGTGTGGGTTTT	-83280072	True	NA	-31	True	TATAAA	-16	NA	83285998	83261461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126
transcript_27272.known	chr11	-	1919	9	FSM	ENSG00000137500.10	ENST00000525503.5	1919	9	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_8	199.014721503209	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	-83285680	True	NA	-25	True	TATAAA	-22	NA	83286351	83261455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285552
transcript_27273.known	chr11	-	1550	9	FSM	ENSG00000137500.10	ENST00000455220.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	285.660610471587	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGGGTGGATCACTTGAGG	NA	False	NA	30	True	NA	NA	NA	83286390	83261316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83286099
transcript_27275.known	chr11	-	773	9	FSM	ENSG00000137500.10	ENST00000529312.5	773	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	370.810261454561	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGGCTTCTTAGAA	-83280053	True	NA	NA	False	NA	NA	NA	83285979	83261890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285126_83285212_83285872
transcript_27284.nic	chr11	-	1847	8	NIC	ENSG00000137500.10	novel	1919	9	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	199	junction_6	292.388056374066	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGTGGGTTTTCAAAGT	NA	False	NA	-25	True	TATAAA	-22	NA	83286383	83261455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83280140_83280261_83285552
transcript_27295.known	chr11	-	1039	7	FSM	ENSG00000137500.10	ENST00000529856.5	1039	7	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_6	320.394938578416	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATACGGACTAAAAGAGGAA	-83285684	True	NA	-60	True	NA	NA	NA	83286355	83261795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83261967_83265864_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83285872
transcript_27315.known	chr11	-	435	4	FSM	ENSG00000247137.9	ENST00000529031.5	435	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	2.05480466765633	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGGTAAAGGTTTTA	-83193168	True	NA	-33	True	AATATA	-20	NA	83193600	83191062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83191169_83192427_83192542_83192735_83192817_83193466
transcript_27319.known	chr11	-	1433	4	FSM	ENSG00000137500.10	ENST00000526265.5	1433	4	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_3	427.142443063981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATTTTTTAAAAGACAAAG	-83280062	True	NA	NA	False	AAAAAG	-8	NA	83285988	83273245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83273701_83273792_83273865_83273950_83274741_83285872
transcript_27320.known	chr11	-	549	3	FSM	ENSG00000247137.9	ENST00000528524.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATATGTAGTAGATAAATT	NA	False	NA	1	True	NA	NA	NA	83193794	83191028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83191169_83192735_83192817_83193466
transcript_27321.known	chr11	+	1720	1	FSM	ENSG00000165494.12	ENST00000624931.1	1720	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTTATTTAC	83153938	True	NA	12	True	AATAAA	-15	NA	83157159	83158879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_83157200_83158900
transcript_27322.known	chr11	-	777	9	FSM	ENSG00000137500.10	ENST00000527025.5	777	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	333.53401250847	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCTAACAAACTTGAGACAA	-83280064	True	NA	NA	False	AATAAA	-39	NA	83285990	83265899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83265980_83273646_83273701_83273792_83273865_83273950_83273993_83274638_83274741_83278725_83278830_83280140_83280261_83285126_83285212_83285872
transcript_27323.known	chr11	-	429	4	FSM	ENSG00000247137.9	ENST00000529811.5	429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAATAATGGTAAAGGTTT	-83193188	True	NA	-35	True	AATATA	-18	NA	83193620	83191064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83191169_83192427_83192542_83192735_83192793_83193466
transcript_2733.known	chr1	+	1635	10	FSM	ENSG00000011009.11	ENST00000374514.8	1635	10	0	0	0	0	multi-exon	TRUE	canonical	3	1879	junction_1	100.551933636428	4090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCAGGCCTGGCTGATTC	23769762	True	NA	15	True	ATTAAA	-17	NA	23791144	23795539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23791251_23792656_23792761_23793007_23793040_23793150_23793217_23793704_23793753_23793859_23793931_23794062_23794137_23794223_23794326_23794426_23794601_23794681
transcript_27336.known	chr11	-	566	5	FSM	ENSG00000150672.18	ENST00000530800.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.72854512504805	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAAATTTGGGGGCAGTT	-83724897	False	NA	NA	False	NA	NA	NA	83724956	83486154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_83486252_83532707_83532784_83541681_83541859_83633210_83633326_83724855
transcript_27338.nnic	chr11	-	1597	4	NNC	ENSG00000150672.18	novel	493	4	NA	NA	-447	45606	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.24721912892465	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTCTGTTGCATTCA	-85627488	True	NA	NA	False	AATAAA	-32	NA	85628369	85553050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_85553209_85598656_85598789_85626598_85626754_85627217
transcript_27343.nnic	chr11	-	490	2	NNC	ENSG00000150672.18	novel	566	5	NA	NA	217	-55315	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTTGCGTGGGATTATAT	-83725127	False	NA	NA	False	AATAAA	-25	NA	83725186	83688187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_83688347_83724855
transcript_27361.known	chr11	+	1149	6	FSM	ENSG00000171204.13	ENST00000529197.1	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	187.764746424881	1440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCCTCTTTGTATG	85623497	True	NA	20	True	AATAAA	-34	NA	85628604	85636510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_27365.known	chr11	+	675	6	FSM	ENSG00000171204.13	ENST00000530783.5	675	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	312.498703997313	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCCTCTAGTCTTTCAG	85623489	True	NA	NA	False	AATGAA	-9	NA	85628596	85636128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85629131_85629204_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_27370.known	chr11	+	820	6	FSM	ENSG00000171204.13	ENST00000531477.5	820	6	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_2	306.683158976818	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATACATGAAGAGTAAC	85623485	True	NA	NA	False	ATTAAA	-43	NA	85628592	85636210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85629131_85629263_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_27382.known	chr11	+	1015	5	FSM	ENSG00000171204.13	ENST00000358867.11	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	149.935611180266	3993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	85623485	True	NA	46	True	AATAAA	-43	NA	85628592	85636536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666_85635779_85636045
transcript_27389.known	chr11	+	1388	4	FSM	ENSG00000171204.13	ENST00000528361.5	1388	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_1	157.599351380504	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAATCCAGGTCTGGTTTG	85623489	True	NA	NA	False	AATAAA	-13	NA	85628596	85635087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631144_85631317_85631686_85631809_85634085
transcript_27390.known	chr11	+	1273	4	FSM	ENSG00000171204.13	ENST00000534341.1	1273	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	160.800773906374	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTTTGGGCTTTAAGGTC	85623494	True	NA	46	True	AATAAA	-43	NA	85628601	85636536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85631686_85631809_85634085_85634280_85635666
transcript_27393.known	chr11	+	376	4	FSM	ENSG00000171204.13	ENST00000531274.1	376	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	299.351892520417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATTAAATGGTCTATACC	85623522	True	NA	NA	False	AATGAA	-40	NA	85628629	85636159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85634085_85634177_85635666_85635779_85636045
transcript_27395.known	chr11	+	853	4	FSM	ENSG00000171204.13	ENST00000526822.5	853	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	303.494096592778	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCATCTTTCCTCTTTGT	85623496	True	NA	17	True	AATAAA	-31	NA	85628603	85636507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85628689_85634085_85634280_85635666_85635779_85636045
transcript_27405.known	chr11	+	759	5	FSM	ENSG00000171202.7	ENST00000304511.7	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_2	25.6953303150592	5045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	85644661	True	NA	12	True	AATAAA	-13	NA	85647966	85656542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654257_85655593_85655709_85656308
transcript_27409.known	chr11	+	722	5	FSM	ENSG00000171202.7	ENST00000531366.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	214.915099516065	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTAATGTTATGTCTAAT	85644681	True	NA	17	True	AATAAA	-18	NA	85647986	85656547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85650248_85650342_85654062_85654235_85655593_85655709_85656308
transcript_27417.known	chr11	+	643	5	FSM	ENSG00000171202.7	ENST00000532180.1	643	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	222.83233607356	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGTCTAATGTTATGTC	85644715	True	NA	13	True	AATAAA	-14	NA	85648020	85656543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85650311_85650342_85654062_85654257_85655593_85655709_85656308
transcript_2742.known	chr1	-	1488	12	FSM	ENSG00000117308.15	ENST00000374497.7	1488	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	113.975638980406	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTTCTCACAGATGGT	-23796713	False	NA	-9	True	AATAAA	-21	NA	23800402	23795599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800386
transcript_27425.known	chr11	+	656	4	FSM	ENSG00000171202.7	ENST00000528105.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	233.337142826045	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATGTCTAATGTTATGT	85644671	True	NA	12	True	AATAAA	-13	NA	85647976	85656542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_85648090_85654062_85654257_85655593_85655709_85656308
transcript_2743.known	chr1	-	1516	12	FSM	ENSG00000117308.15	ENST00000617979.5	1516	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	86.9120387480287	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-23797065	True	NA	-8	True	AATAAA	-22	NA	23800754	23795598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_27432.known	chr11	-	898	5	FSM	ENSG00000137504.15	ENST00000527529.6	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	106.54928437113	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	-85656453	False	7736	NA	False	AATAGA	-44	NA	85664189	85660334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85660598_85661636_85661750_85662388_85662458_85663523_85663602_85663814
transcript_27434.known	chr11	-	4368	5	FSM	ENSG00000137504.15	ENST00000682836.1	4368	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	76.4215283804243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCCTGTTGAAAGAACAAAT	-85657328	True	NA	79	True	AATATA	-8	NA	85665064	85657741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85660598_85662388_85662458_85663178_85663294_85663523_85663602_85663814
transcript_27435.known	chr11	-	1431	4	FSM	ENSG00000137504.15	ENST00000260058.9	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	64.3963422011599	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTATTTATTTCCTGG	-85656917	False	NA	NA	False	NA	NA	NA	85664653	85660152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85660598_85662388_85662458_85663523_85663602_85663814
transcript_27441.known	chr11	-	745	3	FSM	ENSG00000137504.15	ENST00000528889.1	745	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	119	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTTGGAAAGATTATTTG	-85656123	False	NA	NA	False	TATAAA	-7	NA	85663859	85661952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85662458_85663523_85663602_85663697
transcript_27442.nic	chr11	-	4160	3	NIC	ENSG00000137504.15	novel	2850	4	NA	NA	-17	0	intron_retention	FALSE	canonical	3	222	junction_2	18	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGATTGTTTTATTTCA	NA	False	NA	-19	True	AAAACA	-8	NA	85665146	85659707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_85662458_85663523_85663602_85663814
transcript_27445.nic	chr11	-	2117	3	ISM	ENSG00000137504.15	ENST00000525639.1	2850	4	-44	1416	-17	202	5prime_fragment	FALSE	canonical	3	222	junction_2	18	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATGGGCTCAAAGAATTT	NA	False	NA	0	True	AATAAA	-22	NA	85665146	85661750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_85662458_85663523_85663602_85663814
transcript_27446.known	chr11	-	7140	1	FSM	ENSG00000137504.15	ENST00000527447.2	7140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATATATATTTTTCTGT	-85657393	True	NA	-6	True	AATAAA	-26	NA	85665129	85657989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85658000_85665100
transcript_27447.known	chr11	-	4329	2	FSM	ENSG00000137504.15	ENST00000490820.2	4329	2	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGGATTGTTTTATTTCA	-85657366	True	NA	-19	True	AAAACA	-8	NA	85665102	85659707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85662458_85663523
transcript_27448.known	chr11	-	2850	4	FSM	ENSG00000137504.15	ENST00000525639.1	2850	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	95.4195414414096	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCTTTCATGGGAGTGA	-85657366	True	NA	NA	False	AATAGA	-44	NA	85665102	85660334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85661750_85662388_85662458_85663523_85663602_85663814
transcript_27452.known	chr11	-	4134	20	FSM	ENSG00000073921.18	ENST00000393346.8	4134	20	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_3	41.579680206733	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAAGTTGTACTTTTAT	-86064894	True	NA	-12	True	ATTAAA	-16	NA	86069084	85957174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990400_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_27454.known	chr11	-	3474	20	FSM	ENSG00000073921.18	ENST00000532317.5	3474	20	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_7	19.9979223297553	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTATGGTATTCTGG	-86064869	True	NA	-14	True	AATAAA	-18	NA	86069059	85957683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85978069_85978094_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_27464.nnic	chr11	+	342	2	Antisense	novelGene_ENSG00000073921.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGGTTGGAGCATCAT	86069165	False	NA	NA	False	AATAAA	-22	NA	86069175	86072501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_86069334_86072317
transcript_27467.known	chr11	-	3613	20	FSM	ENSG00000073921.18	ENST00000526033.5	3613	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	45.4871446939679	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTTTGTTATGGTATT	-86064907	True	NA	-18	True	AATAAA	-14	NA	86069097	85957687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_85959061_85974707_85974813_85976622_85976683_85981128_85981229_85981744_85981776_85981871_85982004_85983865_85983974_85990249_85990379_85996825_85996930_86000642_86000780_86001034_86001159_86003365_86003452_86007541_86007584_86011029_86011137_86012280_86012393_86014869_86014964_86022366_86022470_86026291_86026368_86031468_86031612_86068650
transcript_27474.known	chr11	+	1696	13	FSM	ENSG00000074266.22	ENST00000351625.10	1696	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	143.911696497849	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTGTTTTTTGTAGTTCT	86243110	True	NA	83	True	AATAAA	-23	NA	86245222	86278813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86245344_86250295_86250449_86252147_86252241_86255221_86255288_86256386_86256513_86257514_86257597_86264171_86264264_86266082_86266217_86268455_86268562_86270082_86270158_86276979_86277139_86277917_86277992_86278398
transcript_27475.known	chr11	+	1235	2	FSM	ENSG00000074266.22	ENST00000528250.1	1235	2	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTGTTTAGTTACTTT	86277087	False	NA	9	True	AATAAA	-17	NA	86277097	86278739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86277992_86278398
transcript_27498.known	chr11	+	499	5	NNC	ENSG00000149196.17	novel	1108	5	NA	NA	2977	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	396.574709228917	399	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTGAAATTTGTCATGTT	86306285	True	NA	18	True	AATAAA	-15	NA	86306332	86345662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_86306415_86306415_86306483_86337378_86337531_86344602_86344722_86345583
transcript_27503.known	chr11	+	715	4	FSM	ENSG00000149196.17	ENST00000531485.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	382.826621621619	560	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAACATTGAAAAATGAAAA	86293072	True	NA	NA	False	ATTAAA	-19	NA	86302242	86345791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86302479_86337378_86337531_86344602_86344722_86345583
transcript_27510.known	chr11	+	1694	4	FSM	ENSG00000149196.17	ENST00000533986.5	1694	4	0	0	0	0	multi-exon	FALSE	canonical	3	940	junction_2	43.7137151119519	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAATAAAATAATTTTTA	NA	False	NA	-6	True	AAAACA	-4	NA	86302210	86345638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602
transcript_27511.known	chr11	+	1108	5	FSM	ENSG00000149196.17	ENST00000278483.8	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	699	junction_4	133.507256357098	5820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGCATGTGTAATCATT	86293069	True	NA	29	True	AATAAA	-30	NA	86302239	86345943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86302479_86306244_86306483_86337378_86337531_86344602_86344722_86345583
transcript_27512.known	chr11	+	3713	2	FSM	ENSG00000150687.12	ENST00000280258.6	3713	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTGTTTTCTCATATAAT	86799716	True	NA	5	True	AATAAA	-18	NA	86800541	86811233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86800652_86807630
transcript_27513.known	chr11	+	1226	3	FSM	ENSG00000246523.9	ENST00000499504.8	1226	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	86955508	True	NA	NA	False	AATATA	-43	NA	86955615	87000959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86955713_86957981_86958027_86999875
transcript_27514.known	chr11	+	1299	3	FSM	ENSG00000246523.9	ENST00000531827.3	1313	3	14	0	10	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCCCCAAATTTCTATA	86956056	True	NA	NA	False	AATATA	-43	NA	86956090	87000959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_86956261_86957981_86958027_86999875
transcript_27515.known	chr11	+	8980	15	FSM	ENSG00000166575.17	ENST00000305494.6	8980	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	13.6995828925034	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGGTAGATCTCCTTT	87033917	True	NA	9	True	AATAAA	-19	NA	87037933	87328824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87157340_87157407_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_27522.known	chr11	+	3938	14	FSM	ENSG00000166575.17	ENST00000340353.11	3938	14	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	32.7645355971881	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTCTCAAATCTATT	NA	False	NA	35	True	AGTAAA	-20	NA	87037843	87323758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_87038187_87067693_87067822_87071522_87071616_87091361_87091396_87236637_87236685_87295781_87295824_87302295_87302443_87305935_87306006_87309504_87309673_87313424_87313489_87314470_87314548_87318136_87318236_87319309_87319378_87321200
transcript_27532.known	chr11	-	1432	3	FSM	ENSG00000123892.12	ENST00000243662.11	1432	3	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	10	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGAAAGTGCTTTAAGT	-88174616	True	NA	-12	True	AATAAA	-25	NA	88175443	88113250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88114141_88149674_88149956_88175182
transcript_27533.known	chr11	-	928	2	FSM	ENSG00000123892.12	ENST00000531138.1	928	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTATATTGTCCTTGTCCT	-88174606	True	NA	NA	False	NA	NA	NA	88175433	88113463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88114141_88175182
transcript_27536.known	chr11	-	1828	7	FSM	ENSG00000109861.17	ENST00000676612.1	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	607.606163563208	540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311924	True	NA	-6	True	AATAAA	-19	NA	88337740	88293591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337546
transcript_27537.known	chr11	-	2774	7	FSM	ENSG00000109861.17	ENST00000679224.1	2774	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	614.39771773303	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATAAGTTTTTTTTCACTA	-88311933	True	NA	NA	False	TATAAA	-18	NA	88337749	88292493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337707
transcript_27548.known	chr11	-	764	4	FSM	ENSG00000109861.17	ENST00000677796.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	27.4752413799932	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311907	True	NA	-23	True	AATAAA	-16	NA	88337723	88326087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337546
transcript_27549.known	chr11	-	669	4	FSM	ENSG00000109861.17	ENST00000528020.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	33.8755893757667	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGTGTATGTTTTGTT	-88311907	True	NA	43	True	NA	NA	NA	88337723	88326021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88328111_88328197_88334936_88335083_88337707
transcript_2755.nic	chr1	-	1461	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	91.1469143745415	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	NA	False	NA	-8	True	AATAAA	-22	NA	23800825	23795598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_23796008_23796150_23796266_23796508_23796587_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23799365_23799437_23800711
transcript_27552.known	chr11	-	677	3	FSM	ENSG00000109861.17	ENST00000677468.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311920	True	NA	-23	True	AATAAA	-16	NA	88337736	88326087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88328111_88328197_88337500
transcript_27555.known	chr11	-	1870	7	FSM	ENSG00000109861.17	ENST00000227266.10	1870	7	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_3	223.707956943869	4448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311920	True	NA	-6	True	AATAAA	-19	NA	88337736	88293591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88334936_88335083_88337500
transcript_27556.known	chr11	-	1867	7	FSM	ENSG00000109861.17	ENST00000678506.1	1867	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	664.580485887317	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311956	True	NA	-6	True	AATAAA	-19	NA	88337772	88293591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312426_88312555_88334936_88335083_88337500
transcript_27557.known	chr11	-	1957	8	FSM	ENSG00000109861.17	ENST00000677802.1	1957	8	0	0	0	0	multi-exon	FALSE	canonical	1	27	junction_5	761.464083867656	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311922	True	NA	-6	True	AATAAA	-19	NA	88337738	88293591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312387_88312555_88328111_88328197_88334936_88335083_88337500
transcript_27558.known	chr11	-	1662	6	FSM	ENSG00000109861.17	ENST00000677208.1	1662	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	724.846632053981	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311879	True	NA	-6	True	AATAAA	-19	NA	88337695	88293591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88334936_88335083_88337500
transcript_27559.known	chr11	-	1604	3	FSM	ENSG00000109861.17	ENST00000679199.1	1604	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTCAGACTGCTTCCTC	-88311920	True	NA	NA	False	TATAAA	-24	NA	88337736	88315252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88316475_88334936_88335083_88337500
transcript_27560.known	chr11	-	724	3	FSM	ENSG00000109861.17	ENST00000677976.1	724	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	909	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311906	True	NA	-23	True	AATAAA	-16	NA	88337722	88326087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88334936_88335083_88337500
transcript_27561.known	chr11	-	900	5	FSM	ENSG00000109861.17	ENST00000393301.5	900	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	832.809514534987	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACGTTGTTCTTTTTCTCTT	-88311909	True	NA	-23	True	AATAAA	-16	NA	88337725	88326087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326444_88327928_88328017_88328111_88328197_88334936_88335083_88337500
transcript_27562.known	chr11	-	778	4	FSM	ENSG00000109861.17	ENST00000529974.2	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	908.920360769975	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGTTCTTTTTCTCTTTT	-88311917	True	NA	-21	True	AATAAA	-18	NA	88337733	88326085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88326400_88328111_88328197_88334936_88335083_88337500
transcript_27563.known	chr11	-	672	3	FSM	ENSG00000109861.17	ENST00000534131.2	672	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	989.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTCAGCATCCTCCAGG	-88311910	True	NA	NA	False	AATAAA	-18	NA	88337726	88330345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88330646_88334936_88335083_88337500
transcript_27564.known	chr11	-	1802	7	FSM	ENSG00000109861.17	ENST00000678395.1	1802	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	664.580485887317	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGGAGTTTATGTTTACT	-88311914	True	NA	-6	True	AATAAA	-19	NA	88337730	88293591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_88294509_88296132_88296265_88300529_88300646_88309162_88309319_88312449_88312555_88334936_88335083_88337500
transcript_27568.nnic	chr11	+	686	4	FSM	ENSG00000288018.2	ENST00000689290.1	695	4	-8	17	-8	0	multi-exon	FALSE	canonical	2	12	junction_2	2.62466929133727	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATAATGTAATTTCTTTT	88337677	True	NA	NA	False	TTTAAA	-15	NA	88337842	88428176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_88338057_88373236_88373328_88423486_88423598_88427906
transcript_27569.known	chr11	-	560	3	FSM	ENSG00000086991.13	ENST00000393282.2	560	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACCAACAAATAAATAATT	NA	False	NA	NA	False	AATATA	-7	NA	89491565	89488905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_89488994_89490457_89490554_89491189
transcript_27575.known	chr11	+	1504	7	FSM	ENSG00000077616.11	ENST00000529090.5	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.81894409826699	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATAACTGATATTTCTT	90134079	True	NA	NA	False	AGTAAA	-16	NA	90134663	90158757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_90134841_90135558_90135671_90147329_90147517_90149005_90149108_90150481_90150608_90152297_90152485_90158144
transcript_27580.known	chr11	-	1136	12	FSM	ENSG00000110172.12	ENST00000525317.5	1136	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	169.932655596317	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGGGAGATGGAAGGAAG	-90213944	True	NA	NA	False	AAAAAG	-32	NA	90223030	90202406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90206747_90206811_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_27586.known	chr11	-	3070	11	FSM	ENSG00000110172.12	ENST00000320585.11	3070	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_6	52.0523774673165	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGTCTTTTTTAGC	-90213963	True	NA	2	True	AATAAA	-30	NA	90223049	90200428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_27593.known	chr11	-	2003	10	FSM	ENSG00000110172.12	ENST00000457199.6	2003	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	152.551630604199	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGAGTTTTTTTTTAAAGT	-90213973	True	NA	-21	True	AATAAA	-16	NA	90223059	90201448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_90202552_90202812_90202876_90203307_90203428_90205459_90205566_90206201_90206273_90210535_90210595_90211214_90211319_90214017_90214176_90218134_90218185_90222890
transcript_27599.nic	chr11	-	587	5	ISM	ENSG00000110172.12	ENST00000525317.5	1136	12	-79	8809	-32	-645	5prime_fragment	FALSE	canonical	3	408	junction_4	51.5479146037936	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAGATTTTATTTTGTTT	-90214023	True	NA	NA	False	GATAAA	-37	NA	90223109	90211215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_90211319_90214017_90214176_90215173_90215231_90218134_90218185_90222890
transcript_27601.known	chr11	+	19504	28	FSM	ENSG00000165323.16	ENST00000525166.6	19504	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_25	7.84643418964662	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAATTGTGTTGACTCTTTT	92223680	True	NA	NA	False	AGTAAA	-19	NA	92224817	92896473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_92225175_92352095_92355405_92524633_92524949_92697383_92697446_92761855_92762171_92764878_92765090_92774040_92774181_92789942_92790219_92792766_92792978_92797835_92801910_92805152_92805350_92806361_92806516_92809842_92810077_92831621_92832012_92834869_92835085_92836565_92836704_92837662_92837807_92840561_92840760_92843933_92844733_92857213_92857349_92859164_92859323_92866740_92867210_92880730_92880885_92882737_92883394_92886999_92887114_92889188_92889249_92889855_92889892_92890490
transcript_27604.known	chr11	-	6037	11	FSM	ENSG00000180773.15	ENST00000326402.9	6037	11	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_5	20.0489401216124	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCCTTTTAGATAACATT	-93195281	True	NA	-4	True	AATAAA	-15	NA	93197991	93144173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93148845_93154107_93154278_93162705_93162876_93165917_93166017_93167943_93168172_93180796_93180882_93181690_93181787_93182805_93182895_93184429_93184521_93185690_93185815_93197777
transcript_2761.known	chr1	-	1563	11	FSM	ENSG00000117308.15	ENST00000459934.5	1563	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	91.0881441242492	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGCTCTGAAAGAGCTT	-23797064	True	NA	-70	True	NA	NA	NA	23800753	23795660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23796008_23796150_23796266_23796508_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_27623.known	chr11	-	374	3	FSM	ENSG00000166002.7	ENST00000526869.1	374	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	22	1269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACGTGGCCACGCG	-93538421	True	NA	NA	False	NA	NA	NA	93543355	93479048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93479270_93499275_93499349_93543275
transcript_27626.known	chr11	-	889	2	FSM	ENSG00000166002.7	ENST00000525141.1	889	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATGCTTATCATGTTTT	NA	False	NA	-10	True	AATAAA	-19	NA	93499351	93478471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93479285_93499275
transcript_27631.nic	chr11	-	1668	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.020904544594	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTACTTCATGCTTGAAA	-93734048	True	NA	-33	True	AATAAA	-16	NA	93741540	93730199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_27648.nic	chr11	-	1593	14	NIC	ENSG00000166012.17	novel	1735	14	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	151.020904544594	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAGAAAGTCAGCATGT	-93734054	False	NA	-20	True	ATTAAA	-15	NA	93741546	93730280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_93730448_93730676_93730713_93731149_93731217_93731752_93731800_93732243_93732292_93733086_93733122_93733349_93733398_93734624_93734661_93736140_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_2765.nic	chr1	-	1456	11	NIC	ENSG00000117308.15	novel	1516	12	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	114.380461618233	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTTCTCACAGATGGTC	-23797083	True	NA	-8	True	AATAAA	-22	NA	23800772	23795598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_23796008_23796150_23796266_23796696_23796783_23796875_23796943_23797033_23797148_23797694_23797872_23798116_23798231_23798614_23798731_23798886_23799013_23799365_23799437_23800711
transcript_27660.known	chr11	+	3622	13	FSM	ENSG00000042429.12	ENST00000638487.1	3622	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	59.0218297656798	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAAGTCCTTTGTATTTC	93781798	True	NA	-17	True	TTTAAA	-44	NA	93784241	93813268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794249_93794440_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_27684.known	chr11	+	5087	12	FSM	ENSG00000042429.12	ENST00000251871.9	5087	12	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	15.5881921830978	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTAGTAAGTTCACTTT	93781838	True	NA	NA	False	AATAAA	-17	NA	93784281	93814963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_27685.known	chr11	+	2137	12	FSM	ENSG00000042429.12	ENST00000639523.1	2137	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.0443551874505	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATATTACTAACT	93784731	False	NA	-89	True	NA	NA	NA	93784748	93812310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784934_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_27705.known	chr11	+	2317	11	FSM	ENSG00000042429.12	ENST00000639724.1	2317	11	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_10	46.862031539403	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATAAAGTATGTGGTTT	93781863	True	NA	-21	True	TTTAAA	-24	NA	93784306	93812378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93797534_93797720_93801834_93801973_93807517_93807636_93811852
transcript_27706.known	chr11	+	3235	11	FSM	ENSG00000042429.12	ENST00000639189.1	3235	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	44.7089476503306	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAAAATGGAGCTTGTGGG	93781849	True	NA	22	True	AATAAA	-35	NA	93784292	93813307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93809716_93809877_93811852
transcript_27724.known	chr11	+	1862	10	FSM	ENSG00000182919.15	ENST00000528099.5	1862	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.2699017845576	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAAGAAAAATCAGTGT	93739386	True	NA	NA	False	ATTAAA	-16	NA	93741658	93762303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93741962_93742095_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_27727.known	chr11	+	2108	10	FSM	ENSG00000042429.12	ENST00000639596.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_9	61.9762997313898	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTTAAAATATTACTAACT	93781819	True	NA	-89	True	NA	NA	NA	93784262	93812310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000_93788168_93790573_93790794_93793727_93793865_93793950_93794036_93794907_93795061_93796409_93796541_93801834_93801973_93807517_93807636_93811852
transcript_27734.known	chr11	+	4163	9	FSM	ENSG00000182919.15	ENST00000354421.8	4163	9	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	23.2647802482637	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739399	True	NA	NA	False	NA	NA	NA	93741671	93764749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_27756.known	chr11	+	4094	8	FSM	ENSG00000182919.15	ENST00000528288.5	4094	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	69.2999985275495	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGCTCTTCTTACTCTTA	93739318	True	NA	NA	False	NA	NA	NA	93741590	93764749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93759741_93759859_93761514
transcript_27760.known	chr11	+	2417	8	FSM	ENSG00000182919.15	ENST00000617482.4	2417	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	62.6542178979848	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739321	True	NA	24	True	AATAAA	-34	NA	93741593	93763102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93747296_93747449_93750345_93750445_93753681_93753756_93753935_93754038_93757315_93757466_93759741_93759859_93761514
transcript_27766.known	chr11	+	2442	8	FSM	ENSG00000182919.15	ENST00000540113.5	2442	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	69.3929950002307	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTCCAGACAAAATAATATT	93739321	True	NA	24	True	AATAAA	-34	NA	93741593	93763102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741_93759859_93761514
transcript_27775.known	chr11	+	779	7	FSM	ENSG00000182919.15	ENST00000530620.5	779	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	72.0848265741288	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAAGTCTGTGTCTGTTTTTT	93739397	True	NA	NA	False	AATGAA	-45	NA	93741669	93759859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93741729_93750345_93750445_93753681_93753756_93753935_93754038_93755209_93755387_93757315_93757466_93759741
transcript_27783.known	chr11	-	1632	6	FSM	ENSG00000166012.17	ENST00000448108.7	1632	6	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_5	28.6034962897895	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGTAGCTGGGATTACA	-93734003	True	NA	NA	False	NA	NA	NA	93741495	93735566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93736305_93736693_93736752_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_27793.nic	chr11	+	640	4	ISM	ENSG00000166004.15	ENST00000325212.11	8014	30	-158	61497	-158	-26759	5prime_fragment	FALSE	canonical	3	21	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTGAGGCATAAAGAAGC	NA	False	NA	NA	False	AAGAAA	-5	NA	93661523	93668861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807
transcript_27806.nic	chr11	-	619	3	ISM	ENSG00000166012.17	ENST00000448108.7	1632	6	-137	2720	-137	-178	5prime_fragment	FALSE	canonical	3	255	junction_2	29	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGGAGGTACCAGC	NA	False	NA	NA	False	TATAAA	-6	NA	93741632	93738286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_93738500_93739236_93739332_93741321
transcript_27809.known	chr11	+	2278	2	FSM	ENSG00000042429.12	ENST00000530819.1	2278	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGCCA	93781838	True	NA	NA	False	NA	NA	NA	93784281	93789796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93784764_93788000
transcript_27811.known	chr11	-	538	2	FSM	ENSG00000166012.17	ENST00000529508.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGCTGTGTTTGTTTTAC	-93734002	True	NA	NA	False	NA	NA	NA	93741494	93738966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93739332_93741321
transcript_27813.known	chr11	-	73	1	FSM	ENSG00000202314.1	ENST00000365444.1	73	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTACATTAAATATTGCAT	-93724082	False	NA	-25	True	AATGAA	-21	NA	93731574	93731501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93731500_93731600
transcript_27814.known	chr11	+	8014	30	FSM	ENSG00000166004.15	ENST00000325212.11	8014	30	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_13	14.5366812261312	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCATGTTGTGATTTCTTC	93659809	True	NA	15	True	AATAAA	-16	NA	93661681	93730358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_93661775_93666681_93666816_93667606_93667808_93668807_93668933_93669676_93669771_93675570_93675667_93679411_93679553_93683558_93683743_93683963_93684129_93687643_93687866_93691682_93691776_93691926_93692031_93695496_93695635_93696319_93696418_93696681_93700187_93702459_93702638_93702775_93702920_93706744_93706898_93721311_93721413_93721953_93722051_93723040_93723290_93724253_93724376_93725650_93725832_93726975_93727638_93728680_93728822_93729433_93729531_93729613_93729782_93729869_93729970_93730048_93730149_93730230
transcript_27815.known	chr11	-	1127	10	FSM	ENSG00000166012.17	ENST00000527169.5	1127	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	194.209572433213	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATGGTTTTTATCTTAAC	-93733987	True	NA	NA	False	ATTAAA	-34	NA	93741479	93731145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_93731217_93731752_93731800_93732243_93732314_93733086_93733122_93733349_93733398_93734624_93734661_93737063_93737240_93738108_93738500_93739236_93739332_93741321
transcript_27818.nnic	chr11	-	722	4	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.55902608401044	60	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	-94129342	True	NA	2	True	ATTAAA	-16	NA	94129528	94066970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067567_94067682_94067744_94129328
transcript_27821.nnic	chr11	-	655	3	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	-94129336	True	NA	2	True	ATTAAA	-16	NA	94129522	94066970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067567_94129328
transcript_27823.nnic	chr11	-	838	3	Antisense	novelGene_ENSG00000110218.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	4	24	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTGTTTGTTTGTTTG	-94129342	True	NA	2	True	ATTAAA	-16	NA	94129528	94066970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_94067296_94067430_94067744_94129328
transcript_27826.known	chr11	+	2852	5	FSM	ENSG00000110218.9	ENST00000227638.8	2852	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	14.5838095160352	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGTAAGCTTATTTCAT	94126114	True	NA	10	True	AATAAA	-23	NA	94128840	94181968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94129494_94153490_94153631_94178368_94178593_94179601_94180258_94180789
transcript_27828.known	chr11	+	546	3	FSM	ENSG00000250519.7	ENST00000506309.6	546	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATCATCATACTTCAAAGA	94238082	True	NA	NA	False	NA	NA	NA	94238149	94279029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94238278_94276956_94277110_94278764
transcript_27829.known	chr11	+	570	2	FSM	ENSG00000250519.7	ENST00000515097.2	570	2	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACCATATCGCTAGAGAGA	94238082	True	NA	NA	False	NA	NA	NA	94238149	94279206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94238278_94278764
transcript_27831.known	chr11	-	6841	20	FSM	ENSG00000020922.13	ENST00000323929.8	6841	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	60.246722649682	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGGTAAAGTGATTTTTAAA	-94490180	True	NA	-24	True	AATAAA	-35	NA	94493844	94415569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445894_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_27836.nic	chr11	-	1411	11	ISM	ENSG00000020922.13	ENST00000323929.8	6841	20	-30	48546	0	11100	5prime_fragment	FALSE	canonical	0	0	junction_10	67.764961447639	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTAAGCTAGTTATTTTT	-94490210	True	NA	NA	False	NA	NA	NA	94493874	94464115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493790
transcript_27838.known	chr11	-	2588	19	FSM	ENSG00000020922.13	ENST00000323977.7	2588	19	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	63.281557783888	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCATAATGAAAAACTATG	-94490210	True	NA	NA	False	AATAAA	-21	NA	94493874	94419875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493683
transcript_27839.known	chr11	-	2604	20	FSM	ENSG00000020922.13	ENST00000393241.8	2604	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	75.0080697413004	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTTCATAATGAAAAACTA	-94490184	True	NA	NA	False	AATAAA	-19	NA	94493848	94419877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94420182_94429910_94429987_94435831_94435900_94437176_94437236_94445809_94445891_94447218_94447439_94456275_94456339_94459407_94459582_94460935_94461037_94464112_94464240_94467812_94467894_94470470_94470643_94471573_94471760_94476288_94476404_94478734_94478877_94479673_94479762_94485923_94486085_94490832_94490966_94492781_94492907_94493720
transcript_27841.known	chr11	+	587	4	FSM	ENSG00000168876.9	ENST00000544514.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	37.7918274528002	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCAGTGACTGTGGATGG	94492973	True	NA	NA	False	NA	NA	NA	94494003	94498214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603_94496952_94497901_94497965_94498070
transcript_27842.known	chr11	+	1908	3	FSM	ENSG00000168876.9	ENST00000544612.6	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	2.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	94492953	True	NA	9	True	AATAAA	-20	NA	94493983	94499578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603_94496952_94498070
transcript_27843.known	chr11	+	760	3	FSM	ENSG00000168876.9	ENST00000534911.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	31	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAATACCAGAGTGGCT	94492953	True	NA	NA	False	NA	NA	NA	94493983	94498263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603_94497119_94498070
transcript_27845.nic	chr11	+	2024	3	NIC	ENSG00000168876.9	novel	1908	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	39.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAAGGCATGAATTCATTT	94492972	True	NA	9	True	AATAAA	-20	NA	94494002	94499578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_94494171_94496603_94496952_94498070
transcript_27847.known	chr11	+	3002	2	FSM	ENSG00000168876.9	ENST00000544253.1	3002	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAGGCATGAATTCATT	94492977	True	NA	8	True	AATAAA	-19	NA	94494007	94499577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494036_94496603
transcript_27849.known	chr11	+	567	2	FSM	ENSG00000168876.9	ENST00000541144.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCCATCATACCTATC	94492998	True	NA	NA	False	NA	NA	NA	94494028	94497028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94494171_94496603
transcript_27850.known	chr11	+	1844	2	FSM	ENSG00000168876.9	ENST00000302755.4	1844	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGTTTTGAACAACACAAA	94495569	False	NA	-7	True	AATAAA	-4	NA	94496599	94499562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94496952_94498070
transcript_27865.nnic	chr11	+	849	5	NIC	ENSG00000255666.7	novel	2753	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	121	junction_1	151.65318163494	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTGACACAATTATG	94632414	True	NA	27	True	AAGAAA	-24	NA	94641900	94651631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_94642158_94647334_94647579_94648259_94648389_94650473_94650538_94651476
transcript_27870.nnic	chr11	+	631	5	NNC	ENSG00000255666.7	novel	532	5	NA	NA	-271	0	intron_retention	FALSE	canonical	3	131	junction_1	148.673089360516	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGTTTGACACAATTATG	94647179	False	NA	27	True	AAGAAA	-24	NA	94647207	94651631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_94647247_94647334_94647579_94648259_94648389_94650473_94650538_94651476
transcript_2788.known	chr1	-	598	4	FSM	ENSG00000117308.15	ENST00000466250.5	598	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	117.635973333935	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCTGAGATGGCACCACT	-23797072	True	NA	NA	False	NA	NA	NA	23800761	23798379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23798731_23798886_23799013_23799365_23799437_23800711
transcript_27883.nnic	chr11	+	737	3	NIC	ENSG00000255666.7	novel	2753	12	NA	NA	-6	-79	intron_retention	FALSE	canonical	3	121	junction_1	65	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAATGTCATGTTACAT	94632414	True	NA	8	True	AATAAA	-23	NA	94641900	94648495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_94642158_94647334_94647579_94648259
transcript_27884.nnic	chr11	+	519	3	NNC	ENSG00000255666.7	novel	532	5	NA	NA	-271	-79	intron_retention	FALSE	canonical	3	131	junction_1	60	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCAATGTCATGTTACAT	94647179	False	NA	8	True	AATAAA	-23	NA	94647207	94648495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_94647247_94647334_94647579_94648259
transcript_27886.nnic	chr11	+	859	2	NNC	ENSG00000255666.7	novel	532	5	NA	NA	2853	4580	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	0	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTTTGAGTGTTTTGT	94645419	True	NA	33	True	AATAAA	-21	NA	94650331	94657464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_94650538_94656811
transcript_27887.nnic	chr11	+	1212	2	NNC	ENSG00000255666.7	novel	532	5	NA	NA	2856	4577	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTCTGTTTGAGTGTTT	94645422	True	NA	30	True	AATAAA	-18	NA	94650334	94657461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_94650538_94656452
transcript_27888.known	chr11	+	644	7	FSM	ENSG00000255666.7	ENST00000544019.5	644	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	185.061025970714	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATATTGTTTGACACAATT	94632420	True	NA	24	True	AAGAAA	-21	NA	94641906	94651628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94641945_94647334_94647391_94647465_94647579_94648016_94648109_94648259_94648389_94650473_94650538_94651476
transcript_27899.known	chr11	-	1522	7	FSM	ENSG00000150316.12	ENST00000279839.8	1522	7	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	39.7058629871655	6429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTATCTTGGAGGAT	-94961182	True	NA	0	True	AATAAA	-17	NA	94973556	94962619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971066_94971374_94971488_94972054_94972194_94973497
transcript_27900.known	chr11	-	1113	6	FSM	ENSG00000150316.12	ENST00000621358.4	1113	6	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	38.1439379194126	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAAAGACTGTAAAACGT	-94961212	True	NA	-40	True	ATTAAA	-21	NA	94973586	94963367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_94963515_94966294_94966414_94969988_94970097_94970976_94971488_94972054_94972194_94973497
transcript_27903.known	chr11	+	2951	3	FSM	ENSG00000186280.7	ENST00000335080.6	2951	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	2.5	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTCAAATATTGTGT	94973440	True	NA	18	True	ATTAAA	-25	NA	94973708	94999519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_94974069_94975653_94975749_94997023
transcript_27906.known	chr11	+	560	2	FSM	ENSG00000263465.5	ENST00000638426.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAGAATAAAATTAGA	95068003	False	NA	-25	True	NA	NA	NA	95068057	95069088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95068184_95068654
transcript_27909.known	chr11	+	4307	1	FSM	ENSG00000263465.5	ENST00000587424.3	4307	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGGGTTGTTTCCTATT	95066116	True	NA	26	True	AATAAA	-34	NA	95066918	95071225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95066900_95071200
transcript_27910.known	chr11	-	9563	10	FSM	ENSG00000149212.12	ENST00000536441.7	9563	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	5.05525029603437	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCATTCTCGCTTGGTTT	-95230969	True	NA	1	True	NA	NA	NA	95231202	95165512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95173342_95175497_95175643_95177718_95177910_95178709_95178829_95184419_95184595_95185255_95185493_95189778_95189962_95191403_95191602_95193456_95193523_95230782
transcript_27912.nic	chr11	+	1216	5	ISM	ENSG00000245552.8	ENST00000536683.5	1485	6	1356	-458	-6	-4	3prime_fragment	FALSE	canonical	0	0	junction_1	3.35410196624968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTGGCAGAATCT	95231395	True	NA	0	True	AATAAA	-12	NA	95231541	95234387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_95231574_95232051_95232177_95232589_95232675_95232879_95232920_95233453
transcript_27914.known	chr11	+	2211	5	FSM	ENSG00000245552.8	ENST00000543150.3	2215	5	0	4	0	-4	multi-exon	FALSE	canonical	0	0	junction_1	3.35410196624968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTTCTGGCAGAATCT	95230382	False	NA	0	True	AATAAA	-12	NA	95230395	95234387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95230496_95231124_95232177_95232589_95232675_95232879_95232920_95233453
transcript_27917.known	chr11	+	1858	3	FSM	ENSG00000245552.8	ENST00000668554.2	1946	3	0	88	0	-88	multi-exon	FALSE	canonical	0	0	junction_2	4.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAATCCTTATGCTATT	95231240	False	NA	-84	True	CATAAA	-28	NA	95231253	95234303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95232177_95232589_95232675_95233453
transcript_27918.known	chr11	-	2152	18	FSM	ENSG00000087053.20	ENST00000497683.6	2152	18	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_14	186.448504908725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACTGTAAGATCAGGGGC	-95923751	False	NA	NA	False	NA	NA	NA	95923763	95835289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95866402_95866487_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_27919.known	chr11	-	4629	17	FSM	ENSG00000087053.20	ENST00000675196.1	4629	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	162.888849660589	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923904	False	NA	-6	True	AATAAA	-16	NA	95923916	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923691
transcript_27921.known	chr11	-	4582	16	FSM	ENSG00000087053.20	ENST00000675320.1	4582	16	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	144.309697833822	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95923874
transcript_27922.known	chr11	-	4504	16	FSM	ENSG00000087053.20	ENST00000676166.1	4504	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	122.425850574496	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923852	False	NA	-6	True	AATAAA	-16	NA	95923864	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923691
transcript_27925.known	chr11	-	4387	15	FSM	ENSG00000087053.20	ENST00000675454.1	4387	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	119.090858814022	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95923806	False	NA	-6	True	AATAAA	-16	NA	95923818	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923691
transcript_27926.known	chr11	-	4519	15	FSM	ENSG00000087053.20	ENST00000676388.1	4519	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_12	136.127941020683	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865590_95865677_95888155_95888262_95923874
transcript_27930.known	chr11	-	4505	15	FSM	ENSG00000087053.20	ENST00000676268.1	4505	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	138.540073772235	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857555_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
transcript_27931.known	chr11	-	5412	14	FSM	ENSG00000087053.20	ENST00000675495.1	5412	14	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_13	81.2909887507281	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924119	False	NA	-6	True	AATAAA	-16	NA	95924131	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95923874
transcript_27932.known	chr11	-	3459	16	FSM	ENSG00000087053.20	ENST00000675807.1	3459	16	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	158.897870764002	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-95923853	False	NA	-11	True	ATTAAA	-27	NA	95923865	95834088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865439_95865677_95888155_95888262_95914241_95914313_95923691
transcript_27933.known	chr11	-	4670	15	FSM	ENSG00000087053.20	ENST00000675922.1	4670	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	136.763929634168	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGGATGGATGACACATT	-95924111	False	NA	-6	True	AATAAA	-16	NA	95924123	95832881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865439_95865677_95888155_95888262_95923874
transcript_27934.known	chr11	-	3350	16	FSM	ENSG00000087053.20	ENST00000352297.11	3350	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_15	80.6985061131177	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTGTCCAAAGTTGCC	-95918663	True	NA	-11	True	ATTAAA	-27	NA	95924100	95834088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95888155_95888262_95914241_95914313_95923874
transcript_27935.known	chr11	-	3457	17	FSM	ENSG00000087053.20	ENST00000676261.1	3457	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_14	154.218544199457	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTAAACTTTGTTCT	-95918661	True	NA	-25	True	ATTAAA	-13	NA	95924098	95834102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95888155_95888262_95914241_95914313_95923874
transcript_27936.known	chr11	-	3420	17	FSM	ENSG00000087053.20	ENST00000409459.5	3420	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_13	140.234722318511	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGTCCAAAGTTGCCA	-95918659	True	NA	-10	True	ATTAAA	-28	NA	95924096	95834087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_27937.known	chr11	-	3536	18	FSM	ENSG00000087053.20	ENST00000675489.1	3536	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	167.224131137232	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTTCTTGTCCAAAGTT	-95918656	True	NA	-14	True	ATTAAA	-24	NA	95924093	95834091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95835452_95836147_95836325_95838093_95838208_95841616_95841710_95844952_95845160_95847713_95847900_95849673_95849863_95850599_95850750_95857551_95857636_95858530_95858633_95861991_95862103_95862271_95862367_95865600_95865677_95882373_95882497_95887611_95887685_95888155_95888262_95914241_95914313_95923874
transcript_27946.known	chr11	+	3141	11	FSM	ENSG00000166037.11	ENST00000325542.10	3141	11	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	49.0758596460622	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGGCTCTGAGTCCT	95779969	True	NA	27	True	ATTAAA	-21	NA	95790497	95832693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_27949.known	chr11	+	1936	11	FSM	ENSG00000166037.11	ENST00000540830.5	1936	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	127.112391213445	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTTGTGGGTGTGATTT	95780004	True	NA	3	True	NA	NA	NA	95790532	95831543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812951_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95822498_95822577_95827785_95828028_95829186_95829332_95831025
transcript_2795.known	chr1	-	1570	9	FSM	ENSG00000117305.15	ENST00000374490.8	1570	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_3	31.9491783931919	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	-23824022	True	NA	-8	True	ATTAAA	-21	NA	23825429	23801884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_27956.known	chr11	+	3098	10	FSM	ENSG00000166037.11	ENST00000325486.9	3098	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_7	118.12799084985	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGTAGTGGCTCTGAGTC	95779932	True	NA	25	True	ATTAAA	-19	NA	95790460	95832691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870_95821979_95827785_95828028_95829186_95829332_95831025
transcript_2796.nnic	chr1	-	1591	9	NNC	ENSG00000117305.15	novel	1570	9	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	94.6067518732146	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCAGCATTCGGTTGTGCA	-23824067	True	NA	-8	True	ATTAAA	-21	NA	23825474	23801884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_23802565_23804399_23804526_23808134_23808324_23810735_23810800_23814189_23814339_23816674_23816771_23817475_23817584_23820509_23820594_23825379
transcript_27973.known	chr11	+	2084	7	FSM	ENSG00000166037.11	ENST00000538658.5	2084	7	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	40.773425441361	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTTATATTTATTTA	95780130	False	NA	14	True	AGTAAA	-18	NA	95790658	95823215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799231_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826_95818905_95821870
transcript_27980.known	chr11	+	870	6	FSM	ENSG00000166037.11	ENST00000541365.5	870	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	181.02927939977	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAGTTAAAATGTGAGAA	95779993	True	NA	NA	False	NA	NA	NA	95790521	95818903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95799236_95799389_95812931_95813112_95813467_95813590_95817786_95817904_95818826
transcript_27982.known	chr11	+	851	6	FSM	ENSG00000166037.11	ENST00000544522.5	851	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	208.022114209043	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCAGTGCATGTGTCTTTTT	95779984	True	NA	NA	False	NA	NA	NA	95790512	95817903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_95790744_95795515_95795560_95799231_95799389_95812931_95813112_95813467_95813590_95817786
transcript_27990.known	chr11	-	7121	5	FSM	ENSG00000184384.14	ENST00000524717.6	7121	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.39116499156263	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGTGTAGTCTGTAGT	-96342417	True	NA	-3	True	ATTAAA	-22	NA	96343195	95976597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_95979964_95985530_95985643_95991519_95991724_96091891_96093518_96341382
transcript_27992.known	chr11	-	2611	10	FSM	ENSG00000149231.16	ENST00000646050.1	2611	10	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_2	40.1149582642586	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGTAATAAAGTAAAATGG	-96389910	False	NA	NA	False	NA	NA	NA	96389921	96352804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359098_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_27993.known	chr11	-	2746	10	FSM	ENSG00000149231.16	ENST00000679788.1	2746	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	54.6341366627943	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96387777	True	NA	NA	False	AATAAA	-16	NA	96389905	96352778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96385936_96386021_96387529_96387614_96389843
transcript_27994.known	chr11	-	3156	10	FSM	ENSG00000149231.16	ENST00000679708.1	3156	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	35.6744539785358	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96387752	True	NA	NA	False	AATAAA	-16	NA	96389880	96352778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389364
transcript_27995.known	chr11	-	2715	10	FSM	ENSG00000149231.16	ENST00000646818.2	2715	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	21.7124871621248	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGAACCCTGTGTGTTC	-96387784	True	NA	NA	False	AATAAA	-22	NA	96389912	96352772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_27996.known	chr11	-	2563	10	FSM	ENSG00000149231.16	ENST00000647080.1	2563	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	44.7635764632115	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTGCAGAGTGAACAAATG	-96389910	False	NA	NA	False	AATAAA	-8	NA	96389921	96352786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96365126_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_28.known	ERCC-00062	+	1007	1	FSM	ERCC-00062A	DQ516786	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	400	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATACA	-36	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00062_+_0_1000
transcript_28003.known	chr11	-	2695	9	FSM	ENSG00000149231.16	ENST00000680763.1	2695	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	46.5268739547372	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACAAATGAACCCTGTGT	-96389925	False	NA	NA	False	AATAAA	-18	NA	96389936	96352776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96387529_96387614_96389843
transcript_28004.known	chr11	-	2594	8	FSM	ENSG00000149231.16	ENST00000679960.1	2594	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	47.6406617613696	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96389910	False	NA	NA	False	AATAAA	-16	NA	96389921	96352778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96389843
transcript_28007.known	chr11	-	5328	7	FSM	ENSG00000149231.16	ENST00000679696.1	5328	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	49.468564653615	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAGAGAGCCAAATCATGA	-96387789	True	NA	NA	False	NA	NA	NA	96389917	96349240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96389843
transcript_2801.known	chr1	-	1354	7	FSM	ENSG00000117305.15	ENST00000436439.6	1354	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	93.7504074065222	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCCAGCATTCGGTTGTG	-23824021	True	NA	-10	True	ATTAAA	-19	NA	23825428	23801886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23816674_23816771_23817475_23817584_23820509_23820594_23825355
transcript_28013.known	chr11	-	3972	5	FSM	ENSG00000149231.16	ENST00000530106.2	3972	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	28.7608675112556	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCATGTGCAGGTTTTTC	NA	False	NA	-7	True	AATAAA	-12	NA	96389956	96380538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96383474_96383961_96384762_96386253_96386294_96387529_96387614_96389843
transcript_28022.known	chr11	-	1776	4	FSM	ENSG00000149231.16	ENST00000680322.1	1776	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.9504827599863	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGATTACAAGCATGA	-96389922	False	NA	NA	False	NA	NA	NA	96389933	96352152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96386253_96386294_96387529_96387614_96389843
transcript_28026.known	chr11	-	2817	11	FSM	ENSG00000149231.16	ENST00000679856.1	2817	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	52.1237949500993	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAACAAATGAACCCTGT	-96389925	False	NA	NA	False	AATAAA	-16	NA	96389936	96352778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_96353715_96358992_96359179_96364979_96365151_96371012_96371138_96373374_96373468_96383268_96383474_96383961_96384762_96385936_96386021_96386253_96386294_96387529_96387614_96389843
transcript_28027.known	chr11	+	3140	2	FSM	ENSG00000183340.7	ENST00000332349.5	3140	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATTTTTTAAAGGTTTAA	96389009	True	NA	6	True	AATAAA	-20	NA	96390012	96393561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_96390074_96390482
transcript_28036.nnic	chr11	+	626	3	NNC	ENSG00000254587.2	novel	1647	4	NA	NA	-2350	-117205	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	4	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTGAAATCTTTCATG	96587890	True	NA	10	True	AATAAA	-20	NA	96587966	96596617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_96588234_96590315_96590456_96596398
transcript_28039.nnic	chr11	+	645	3	NNC	ENSG00000254587.2	novel	1647	4	NA	NA	-2350	-117205	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	10	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTGAAATCTTTCATG	96587890	True	NA	10	True	AATAAA	-20	NA	96587966	96596617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_96588234_96590315_96590475_96596398
transcript_28045.nnic	chr11	+	555	3	NNC	ENSG00000254587.2	novel	1647	4	NA	NA	-2336	-117205	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTGAAATCTTTCATG	96587904	True	NA	10	True	AATAAA	-20	NA	96587980	96596617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_96588234_96590372_96590456_96596398
transcript_28048.nnic	chr11	+	516	2	Intergenic	novelGene_8	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	0	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTCTGAAATCTTTCATG	96587915	True	NA	10	True	AATAAA	-20	NA	96587936	96596617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr11_+_96588234_96596398
transcript_28049.known	chr11	+	1647	4	FSM	ENSG00000254587.2	ENST00000527528.1	1647	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTGAATATAATGACTC	96590292	False	NA	NA	False	AATAAA	-21	NA	96590316	96713822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_96590475_96659597_96659716_96660740_96660900_96712610
transcript_28058.known	chr11	-	1865	2	FSM	ENSG00000248027.1	ENST00000501397.1	1865	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGTGTCTGTCTTATTT	NA	False	NA	NA	False	TATAAA	-21	NA	100687955	100684161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_100685704_100687632
transcript_28060.nnic	chr11	+	694	3	NNC	ENSG00000110318.15	novel	7048	11	NA	NA	-9	-74195	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAGCCTCAGTTTTCTCA	NA	False	NA	NA	False	ATTAAA	-19	NA	101915000	101923833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_101915413_101922640_101922761_101923671
transcript_28062.known	chr11	+	7048	11	FSM	ENSG00000110318.15	ENST00000263468.13	7048	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	3.49857113690718	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTGATTTGGTTTTT	101914678	True	NA	NA	False	AATAAA	-22	NA	101915009	102001062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_101915413_101922640_101922761_101944264_101944411_101948030_101948143_101958167_101958367_101961740_101963881_101978346_101978460_101981888_101981965_101986831_101987042_101992777_101992843_101997598
transcript_28063.known	chr11	+	2193	7	FSM	ENSG00000137691.13	ENST00000434758.7	2193	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_6	9.0921211313239	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACTGAAATGTCTGTTTGC	102047329	True	NA	NA	False	CATAAA	-14	NA	102047436	102084554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214_102081282_102083070
transcript_28065.known	chr11	+	845	6	FSM	ENSG00000137691.13	ENST00000526781.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_5	6.72309452558864	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGGAGAACAATT	102047347	True	NA	NA	False	ATTAAA	-16	NA	102047454	102081435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872_102076046_102081214
transcript_28068.nnic	chr11	+	676	5	NNC	ENSG00000137691.13	novel	845	6	NA	NA	-43	-8723	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_4	8.61321658847611	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCCAGGAGTAAAAGAATCT	102047286	True	NA	NA	False	AATAAA	-23	NA	102047393	102067388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102067224
transcript_28069.nic	chr11	+	735	5	ISM	ENSG00000137691.13	ENST00000526781.5	845	6	-45	5324	-27	0	5prime_fragment	FALSE	canonical	2	23	junction_4	5.02493781056044	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTACACAACATCATT	102047302	True	NA	NA	False	AATAAA	-19	NA	102047409	102076111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484_102066652_102075872
transcript_28074.nic	chr11	+	1383	4	ISM	ENSG00000137691.13	ENST00000526781.5	845	6	-197	14049	-179	-8725	5prime_fragment	FALSE	canonical	2	30	junction_1	2.94392028877595	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCCCAGGAGTAAAAGAAT	NA	False	NA	NA	False	AATAAA	-21	NA	102047257	102067386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484
transcript_28075.nic	chr11	+	1331	4	ISM	ENSG00000137691.13	ENST00000526781.5	845	6	-22	13926	-4	-8602	5prime_fragment	FALSE	canonical	2	30	junction_1	2.94392028877595	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGATTCCTGATTTA	102047325	True	NA	NA	False	ATTAAA	-13	NA	102047432	102067509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102047581_102047814_102047897_102058879_102058956_102066484
transcript_28076.known	chr11	+	520	4	FSM	ENSG00000137691.13	ENST00000534360.1	520	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.6363322667334	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAATTACACAACATCATT	102047350	True	NA	NA	False	AATAAA	-19	NA	102047457	102076111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102047581_102047814_102047897_102058879_102058956_102075872
transcript_28081.known	chr11	+	2393	7	FSM	ENSG00000137693.14	ENST00000526343.5	2393	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	42.405450383438	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATACTCTAATATAGATT	102107959	False	NA	-2	True	TATAAA	-16	NA	102110460	102230592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102205892_102206075_102223621_102223753_102227468_102227582_102229701
transcript_28082.known	chr11	+	1365	7	FSM	ENSG00000137693.14	ENST00000629586.2	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	52.1656016930697	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCTCAGGCAGACTGAAT	102110838	False	NA	NA	False	GATAAA	-25	NA	102110848	102229940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102111170_102114143_102114395_102162455_102162572_102205892_102206087_102223621_102223753_102227468_102227582_102229701
transcript_28087.nnic	chr11	+	2282	11	NNC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	116.446940706916	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344577	True	NA	25	True	AATAAA	-15	NA	102347210	102378670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102347377_102348597_102348765_102349877_102349974_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_28092.known	chr11	+	2617	10	FSM	ENSG00000110330.10	ENST00000532672.5	2617	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.1617992842344	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTGTTACCAGAATATTT	102344613	True	NA	24	True	AATAAA	-14	NA	102347246	102378669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102348597_102348765_102349877_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_28094.nnic	chr11	+	2186	10	NIC	ENSG00000110330.10	novel	2617	10	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	94.1617992842344	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344577	True	NA	25	True	AATAAA	-15	NA	102347210	102378670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_102347377_102348597_102348765_102350345_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_2810.known	chr1	-	1101	5	FSM	ENSG00000117305.15	ENST00000235958.4	1101	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	114.770150736156	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGTTGAATGGCACAT	-23823995	True	NA	-33	True	AAAACA	-11	NA	23825402	23801909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23802565_23804399_23804526_23808134_23808324_23820509_23820594_23825355
transcript_28100.known	chr11	+	3764	9	FSM	ENSG00000110330.10	ENST00000227758.7	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_4	26.2032321479622	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102344580	True	NA	25	True	AATAAA	-15	NA	102347213	102378670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102348597_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_28101.known	chr11	+	1927	9	FSM	ENSG00000110330.10	ENST00000530675.5	1927	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	95.0220369177592	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTGAAGCCATCTAAA	102344580	True	NA	NA	False	CATAAA	-22	NA	102347213	102378236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102350000_102350750_102350843_102350944_102362895_102362975_102363667_102363717_102368305_102368549_102377495_102377751_102377856_102377899_102377989
transcript_28108.nnic	chr11	+	1221	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11949	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	139.401099947836	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102374563	True	NA	25	True	AATAAA	-15	NA	102374690	102378670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102374934_102377495_102377751_102377856_102377899_102377989
transcript_28109.nnic	chr11	+	1112	4	NNC	ENSG00000110330.10	novel	1927	9	NA	NA	11973	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	143.640755590698	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTACCAGAATATTTT	102374587	True	NA	25	True	AATAAA	-15	NA	102374714	102378670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_102374849_102377495_102377751_102377856_102377899_102377989
transcript_2811.known	chr1	-	2043	8	FSM	ENSG00000179163.12	ENST00000374479.4	2043	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	13.2711133285641	182	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTATAGCTTTCTTTTC	-23867362	True	NA	12	True	AATAAA	-36	NA	23868290	23845076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23845856_23846073_23846174_23848648_23848840_23854359_23854561_23859797_23859904_23863133_23863272_23865490_23865626_23867897
transcript_28111.known	chr11	+	709	3	FSM	ENSG00000110330.10	ENST00000527808.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTCAGTTGATCAAGAA	102344577	True	NA	NA	False	AAAAAG	-44	NA	102347210	102349013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102347377_102348280_102348408_102348597
transcript_28112.nic	chr11	+	252	2	ISM	ENSG00000110330.10	ENST00000534646.5	562	3	-6	1552	0	-330	5prime_fragment	FALSE	canonical	3	339	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGATATAGTTTGAATTCTA	102344577	True	NA	14	True	AATAAA	-32	NA	102347210	102348683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102347377_102348597
transcript_28114.known	chr11	-	3304	5	FSM	ENSG00000152558.15	ENST00000398136.7	3304	5	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	23.4347498386477	291	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTAAGTGTGTGATTTTG	-102438326	True	NA	-7	True	AATAAA	-19	NA	102452765	102396331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_102398892_102401538_102401693_102401915_102402207_102448811_102448869_102452523
transcript_28118.known	chr11	+	692	2	FSM	ENSG00000255337.1	ENST00000528717.1	692	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATCAATAAAAATCATCC	102452850	True	NA	-19	True	NA	NA	NA	102452918	102462008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102453050_102461447
transcript_28119.known	chr11	-	1759	10	FSM	ENSG00000166670.10	ENST00000279441.9	1759	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.314269680527354	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCTAGAACAATTCATGT	NA	False	NA	NA	False	AATAAA	-27	NA	102780628	102770501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_102770894_102772011_102772116_102772846_102773007_102775187_102775322_102776279_102776425_102776611_102776777_102778623_102778750_102779212_102779362_102779503_102779746_102780486
transcript_28127.known	chr11	+	562	2	FSM	ENSG00000255282.6	ENST00000544820.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCTCCTTTTTGGATGC	102746885	True	NA	NA	False	NA	NA	NA	102747009	102751791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_102747121_102751340
transcript_28128.nic	chr11	+	378	2	ISM	ENSG00000255282.6	ENST00000371455.7	546	5	19	80012	19	-292	5prime_fragment	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTTCCATGTACTAATC	102746862	True	NA	NA	False	AATAAA	-21	NA	102746986	102751499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_102747206_102751340
transcript_28130.known	chr11	-	1535	8	FSM	ENSG00000137692.12	ENST00000531571.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	414.101387565501	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGACAAAGGCCTTAAAG	-103064923	True	NA	-31	True	AATAAA	-10	NA	103092161	103062097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091515
transcript_28132.known	chr11	-	1310	8	FSM	ENSG00000137692.12	ENST00000529281.5	1310	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	402.000304599336	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGACTGAATATTGAAGTT	-103064939	True	NA	-29	True	NA	NA	NA	103092177	103062170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103082747_103082840_103083255_103083327_103089226_103089319_103091683
transcript_28136.known	chr11	-	727	7	FSM	ENSG00000137692.12	ENST00000529294.5	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	545.867708841213	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAATGCAAACCTTTCA	-103091850	False	NA	NA	False	AAAAAG	-31	NA	103091861	103062345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091683
transcript_28137.known	chr11	-	790	6	FSM	ENSG00000137692.12	ENST00000527576.5	790	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	570.812193282519	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTCCGTCAGACATCAT	-103064916	True	NA	NA	False	NA	NA	NA	103092154	103062380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103062415_103064274_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103091786
transcript_28139.known	chr11	-	842	6	FSM	ENSG00000137692.12	ENST00000527779.1	842	6	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	452.149355854899	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTATAACATAACATGT	-103064910	True	NA	NA	False	NA	NA	NA	103092148	103064274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103064378_103066268_103066374_103066458_103066568_103083255_103083327_103089226_103089319_103091786
transcript_28141.known	chr11	-	3838	7	FSM	ENSG00000170962.13	ENST00000393158.7	3838	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	5.87130498460285	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCATTATTTAGTACT	-104164063	False	84	NA	False	AATAAA	-19	NA	104164147	103907188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103909820_103926911_103927127_103943451_103943651_103947661_103947725_103996064_103996246_104000050_104000256_104163803
transcript_28142.known	chr11	-	4052	7	FSM	ENSG00000170962.13	ENST00000302251.9	4052	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	9.3571125650788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTCCATTATTTAGTACT	NA	False	NA	NA	False	AATAAA	-19	NA	104164379	103907188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_103909820_103926911_103927127_103943451_103943651_103947661_103947725_103996064_103996246_104000050_104000238_104163803
transcript_28147.known	chr11	-	1002	5	FSM	ENSG00000256422.7	ENST00000666753.1	1002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.82915619758885	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTCTAGTTTTCAAGGC	-104609323	True	NA	NA	False	NA	NA	NA	104609373	104568233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572556_104572598_104595481_104595534_104609236
transcript_28150.known	chr11	-	673	4	FSM	ENSG00000256422.7	ENST00000545630.2	673	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	-104609301	True	NA	NA	False	AATAAA	-18	NA	104609351	104568484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568918_104569047_104569132_104572556_104572598_104609236
transcript_28151.known	chr11	-	1170	4	FSM	ENSG00000256422.7	ENST00000667686.1	1170	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTTCTTTAAAAGCTTT	-104609323	True	NA	NA	False	AATAAA	-18	NA	104609373	104568119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572075_104572223_104609236
transcript_28153.known	chr11	-	666	4	FSM	ENSG00000256422.7	ENST00000653300.1	666	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	-104609279	True	NA	NA	False	AATAAA	-18	NA	104609329	104568484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104595481_104595534_104609236
transcript_28154.nic	chr11	-	655	3	ISM	ENSG00000256422.7	ENST00000655712.1	2076	4	-46	6624	0	0	5prime_fragment	FALSE	canonical	1	1	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	-104609320	True	NA	NA	False	AATAAA	-18	NA	104609370	104568484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_104568922_104569047_104569132_104609236
transcript_28155.known	chr11	-	818	5	FSM	ENSG00000256422.7	ENST00000658586.1	818	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGATAGAATTTTGTGAAT	-104609295	True	NA	NA	False	AATAAA	-18	NA	104609345	104568484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_104568922_104569047_104569132_104572075_104572223_104572556_104572598_104609236
transcript_28157.known	chr11	+	2994	11	FSM	ENSG00000152578.13	ENST00000393125.6	2994	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	24.1513974750945	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAAATATTTATT	105610015	False	NA	8	True	AATAAA	-18	NA	105610028	105913110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610429_105610907_105611086_105612275_105612435_105752980_105753221_105862023_105862209_105887518_105887573_105898268_105898428_105903813_105903982_105905196_105905302_105910434_105910546_105911875
transcript_28159.nnic	chr11	+	1024	4	NNC	ENSG00000152578.13	novel	2994	11	NA	NA	-123	2305	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	44.6542271235322	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATTTGACTTTTGCCTA	NA	False	NA	NA	False	ATTAAA	-1	NA	105609870	105616741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_105610429_105610907_105611086_105612275_105612435_105616612
transcript_2816.known	chr1	+	380	3	FSM	ENSG00000189266.13	ENST00000471915.5	380	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	529.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGAGAGGTATAACATTC	NA	False	NA	NA	False	NA	NA	NA	23959108	23961465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23959257_23960928_23961135_23961439
transcript_28162.known	chr11	+	367	3	FSM	ENSG00000152578.13	ENST00000527177.5	367	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	54	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	NA	False	NA	NA	False	NA	NA	NA	105609993	105612434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610024_105610907_105611086_105612275
transcript_28163.known	chr11	+	2647	3	FSM	ENSG00000152578.13	ENST00000527669.1	2647	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	19.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTAAACATGATAAATAT	105608937	False	NA	26	True	AATAAA	-35	NA	105610120	105614436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610429_105610907_105611086_105612275
transcript_28165.known	chr11	+	470	3	FSM	ENSG00000152578.13	ENST00000525921.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	49	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTAAAACATAAGCTAT	105610243	False	NA	NA	False	NA	NA	NA	105610265	105612434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_105610429_105610937_105611086_105612275
transcript_28172.known	chr11	-	4103	3	FSM	ENSG00000170903.12	ENST00000301919.9	4103	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	53	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-106017962	True	NA	2	True	AATAAA	-43	NA	106022240	106007898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106010111_106010455_106011068_106020961
transcript_28174.nic	chr11	-	3266	3	NIC	ENSG00000170903.12	novel	4103	3	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	52.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTCAGATGATAC	-106017999	True	NA	2	True	AATAAA	-43	NA	106022277	106007898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_106010111_106010455_106011068_106021835
transcript_28177.known	chr11	-	948	3	FSM	ENSG00000170903.12	ENST00000530788.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	38.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGATGAGCCTCATTTG	NA	False	NA	NA	False	NA	NA	NA	106022403	106009983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106010111_106010455_106011068_106022194
transcript_28184.known	chr11	-	780	2	FSM	ENSG00000170903.12	ENST00000530108.1	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTTGACTGGCGAGCAC	-106017972	True	NA	NA	False	NA	NA	NA	106022250	106010702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106011068_106021835
transcript_28188.known	chr11	+	2767	6	FSM	ENSG00000149313.11	ENST00000278618.9	2767	6	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_3	43.0970996703955	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTATGAGCCTGACACTG	106071510	True	NA	21	True	AATAAA	-23	NA	106077661	106098695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_106077894_106079466_106079693_106090556_106090679_106091315_106091478_106094582_106094655_106096742
transcript_28192.known	chr11	+	1252	5	FSM	ENSG00000149313.11	ENST00000525660.1	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	242.679186375758	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTTAAAAACATGGAAACG	106071506	True	NA	NA	False	AATGAA	-22	NA	106077657	106097298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_106077894_106079466_106079693_106091315_106091478_106094582_106094655_106096742
transcript_28196.known	chr11	-	3840	4	FSM	ENSG00000182359.15	ENST00000531837.2	3840	4	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_3	23.4141457717813	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	-106076398	True	NA	NA	False	AATAAA	-19	NA	106077347	106051097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106054456_106058864_106059110_106076506_106076708_106077311
transcript_28201.known	chr11	-	3751	3	FSM	ENSG00000182359.15	ENST00000526793.5	3751	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	33.5	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAATTGTTCATCTA	NA	False	NA	NA	False	AATAAA	-19	NA	106077459	106051097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_106054456_106058864_106059110_106077311
transcript_28206.known	chr11	-	3278	18	FSM	ENSG00000152404.16	ENST00000282251.10	3244	18	-19	-15	-19	15	multi-exon	FALSE	canonical	3	108	junction_15	13.5825045211015	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTATTTCTGGATT	-107454524	True	NA	0	True	ATTAAA	-36	NA	107457844	107326344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107327054_107329917_107330020_107334880_107334962_107336557_107336714_107348936_107349054_107353523_107353737_107390073_107390212_107392778_107392896_107416208_107416299_107418193_107418288_107428798_107429452_107433633_107433750_107439089_107439184_107441502_107441623_107442938_107443050_107454449_107454573_107455665_107455777_107457711
transcript_28217.nic	chr11	-	437	3	ISM	ENSG00000152404.16	ENST00000282251.10	3244	18	-114	128115	-114	-105764	5prime_fragment	FALSE	canonical	3	142	junction_1	6	1621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGAGTCATCTGATAGCT	NA	False	NA	16	True	AAAAAG	-27	NA	107457939	107454474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_107454573_107455665_107455777_107457711
transcript_28219.nic	chr11	-	339	2	ISM	ENSG00000152404.16	ENST00000282251.10	3244	18	-114	129306	-114	-106955	5prime_fragment	FALSE	canonical	3	154	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAATACTAACAGGTTTAC	NA	False	NA	-1	True	NA	NA	NA	107457939	107455665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_107455777_107457711
transcript_28220.known	chr11	-	4067	12	FSM	ENSG00000137760.15	ENST00000428149.7	4067	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_9	5.39053348377222	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTTGGTCTGCTCATT	-107564971	True	NA	-1	True	AATAAA	-19	NA	107565735	107502726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107505216_107510886_107511037_107522298_107522556_107525440_107525593_107532299_107532407_107549752_107549824_107551807_107551913_107553107_107553204_107553846_107553979_107556765_107557004_107560764_107560900_107565600
transcript_28222.known	chr11	-	2769	8	FSM	ENSG00000110660.15	ENST00000525815.6	2769	8	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_5	19.5040550467154	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTGTGTGGTTTCTTTG	-107857336	True	NA	NA	False	ATTAAA	-25	NA	107858787	107790990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_107792801_107803000_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_28225.nic	chr11	-	1100	7	ISM	ENSG00000110660.15	ENST00000525815.6	2769	8	-30	11899	-9	3955	5prime_fragment	FALSE	canonical	3	219	junction_4	21.0666930379582	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTCATTGGTCAGGCCT	-107857366	True	NA	NA	False	AATAAA	-22	NA	107858817	107802889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_107803156_107804717_107804771_107805358_107805516_107806716_107806877_107811666_107811795_107815789_107815966_107858657
transcript_28227.known	chr11	+	345	1	FSM	ENSG00000240652.1	ENST00000474540.1	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTGCTCCCCTGCAAAT	NA	False	NA	-23	True	NA	NA	NA	107908419	107908764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_107908400_107908800
transcript_28228.known	chr11	+	1885	2	FSM	ENSG00000179331.3	ENST00000320578.3	1885	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTGTCAAAATTATTAAT	107926030	True	NA	NA	False	AGTAAA	-17	NA	107928447	107963482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_107928796_107961945
transcript_28233.known	chr11	+	1498	13	FSM	ENSG00000075239.14	ENST00000673531.1	1498	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	161.044227017163	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTCAGATAAGCTGTTTC	108116124	True	NA	8	True	NA	NA	NA	108121566	108147470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108127885_108127980_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_28239.known	chr11	+	1174	8	FSM	ENSG00000075239.14	ENST00000672367.1	1174	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	156.82929755447	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	108116124	True	NA	27	True	AATAAA	-37	NA	108121566	108147603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_28245.known	chr11	+	751	3	FSM	ENSG00000166266.14	ENST00000526303.1	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTAAATAAATTTATTAATG	108006692	True	NA	NA	False	NA	NA	NA	108008955	108046493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108009373_108033801_108033912_108046269
transcript_28246.known	chr11	-	605	1	FSM	ENSG00000288012.1	ENST00000660738.1	605	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGATGACTCTTAATATT	-108009178	True	NA	2	True	AGTAAA	-19	NA	108009282	108008677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108008700_108009300
transcript_28247.known	chr11	+	6171	19	FSM	ENSG00000166266.14	ENST00000393094.7	6171	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_17	14.0352290441228	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTACCTATCCAGAAAA	108006634	True	NA	13	True	AATAAA	-15	NA	108008897	108107761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108009373_108033801_108033912_108046269_108046370_108049889_108050067_108052659_108052802_108054646_108054793_108054874_108054956_108070095_108070190_108072331_108072463_108073389_108073498_108078175_108078241_108088526_108088660_108089491_108089624_108094390_108094515_108094811_108094988_108095529_108095692_108097635_108097755_108098405_108098530_108104189
transcript_28248.known	chr11	+	1537	12	FSM	ENSG00000075239.14	ENST00000265838.9	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_7	24.5336672033816	2134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	108116124	True	NA	27	True	AATAAA	-37	NA	108121566	108147603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_28249.known	chr11	+	1384	11	FSM	ENSG00000075239.14	ENST00000672580.1	1384	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	134.202682536528	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAACCTTGAAAAGTTT	108116110	True	NA	11	True	AATAAA	-21	NA	108121552	108147587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108138897_108139042_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_28250.known	chr11	+	2258	8	FSM	ENSG00000075239.14	ENST00000531813.5	2258	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	139.500859480931	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAACAACCCCCCCCC	108116141	True	NA	NA	False	AGTAAA	-9	NA	108121583	108143946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108138897_108139042_108140064_108140216_108141604_108141701_108142436
transcript_28251.known	chr11	+	1222	9	FSM	ENSG00000075239.14	ENST00000672907.1	1222	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	144.977961687285	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGATACATTTTTGCATT	108116124	True	NA	27	True	AATAAA	-37	NA	108121566	108147603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108138897_108139042_108140064_108140216_108141604_108141701_108142436_108142551_108143982_108144048_108146201_108146360_108147269
transcript_28252.known	chr11	+	1345	6	FSM	ENSG00000075239.14	ENST00000299355.10	1345	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	168.245772606625	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTATAATGCAAGTGATTT	108116124	True	NA	NA	False	ATTAAA	-16	NA	108121566	108136939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108121679_108131906_108131955_108133819_108133938_108134220_108134317_108135141_108135243_108136069
transcript_28254.nnic	chr11	-	831	2	NNC	ENSG00000149308.17	novel	6113	18	NA	NA	-27	-28482	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCTGATTATGACACTC	-108219740	True	NA	NA	False	AATAAA	-16	NA	108222665	108218941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_108219607_108222499
transcript_28260.nic	chr11	+	1109	5	ISM	ENSG00000149311.20	ENST00000527805.6	9287	61	-321	129796	-297	234	5prime_fragment	FALSE	canonical	3	50	junction_4	21.3702480097916	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGACCCTTAATTTTTATTT	NA	False	NA	NA	False	AGTAAA	-18	NA	108222746	108235977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177_108229324_108235669
transcript_28263.known	chr11	+	498	5	FSM	ENSG00000149311.20	ENST00000639240.1	498	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.2883442298417	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTCGCGTGAGTTTTT	108220841	False	NA	4	True	AATAAA	-13	NA	108223173	108229363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108223187_108224783_108224872_108227598_108227697_108227775_108227889_108229177
transcript_28267.known	chr11	+	442	4	FSM	ENSG00000149311.20	ENST00000683914.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	2.94392028877595	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCGCGTGAGTTTTTTTT	108220816	False	NA	7	True	AATAAA	-16	NA	108223148	108229366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108223187_108227594_108227697_108227775_108227889_108229177
transcript_2827.known	chr1	+	814	3	FSM	ENSG00000189266.13	ENST00000374468.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	510	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACAAATGTTTAAATTTA	23938631	True	NA	NA	False	TATAAA	-3	NA	23959827	23961880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_23959999_23960932_23961135_23961439
transcript_28271.known	chr11	+	560	4	FSM	ENSG00000149311.20	ENST00000526567.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	44.7908720859755	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTCGCGTGAGTTTTTT	108223514	False	NA	5	True	AATAAA	-14	NA	108223528	108229364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108223687_108227594_108227697_108227775_108227889_108229177
transcript_28276.nnic	chr11	-	924	7	NIC	ENSG00000166323.13	novel	582	5	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.37436854187255	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAAAGCCTCTAGGTTT	-108467531	False	NA	NA	False	AATAAA	-10	NA	108467541	108340158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_108340365_108393207_108393379_108405428_108405560_108406762_108406964_108407095_108407150_108461478_108461569_108467470
transcript_28284.known	chr11	-	10304	6	FSM	ENSG00000110723.12	ENST00000265843.9	10304	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.19089023002066	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACTATTTGATTTGGTTT	-108593732	False	NA	-6	True	AATAAA	-14	NA	108593768	108505434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_108514876_108518234_108518374_108528135_108528185_108539023_108539187_108541651_108541813_108593417
transcript_28289.known	chr11	+	3217	18	FSM	ENSG00000178105.12	ENST00000322536.8	3217	18	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	21.8603621316288	1282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTAATGTTTGCATTGTG	108661728	True	NA	13	True	AATAAA	-21	NA	108665068	108940927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_108665340_108673466_108673528_108675595_108675727_108677084_108677244_108678314_108678436_108679370_108679561_108688935_108689063_108691875_108692039_108693515_108693601_108706738_108706838_108715878_108715967_108719796_108719886_108722996_108723463_108838445_108838566_108841314_108841477_108852152_108852210_108917872_108918019_108940245
transcript_28299.known	chr11	+	3144	4	FSM	ENSG00000137714.3	ENST00000260270.3	3144	4	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_1	5.18544972870135	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTTGTATAAAGGTGAT	110427992	True	NA	NA	False	ATTAAA	-20	NA	110429947	110464884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_110430306_110435833_110435959_110456917_110457048_110462353
transcript_28304.known	chr11	-	508	2	FSM	ENSG00000271584.2	ENST00000603154.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATAATTTTGCATTTTG	NA	False	NA	NA	False	AATAAA	-25	NA	111097357	111091931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111092312_111097229
transcript_28308.known	chr11	+	1414	5	FSM	ENSG00000214290.9	ENST00000398035.6	1414	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	7.66077672302228	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTCATAGTTTAAATTT	111299145	True	NA	NA	False	NA	NA	NA	111299250	111308628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111299725_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_28309.nic	chr11	+	1208	5	ISM	ENSG00000214290.9	ENST00000638573.1	1080	6	1175	-106	-3	0	3prime_fragment	FALSE	canonical	2	7	junction_1	6.36396103067893	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	111299624	False	NA	6	True	AATAAA	-18	NA	111299729	111308735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_111299891_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_28310.known	chr11	+	1332	5	FSM	ENSG00000214290.9	ENST00000526216.1	1332	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.39081998549647	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGATTTTTTTTAATT	111299627	False	NA	6	True	AATAAA	-18	NA	111299732	111308735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111300018_111300526_111300622_111304927_111304983_111306393_111306624_111308068
transcript_28313.known	chr11	-	5442	2	FSM	ENSG00000196167.10	ENST00000355430.4	5442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATGACTAAATTAACTT	-111299671	False	NA	NA	False	AATAAA	-19	NA	111299814	111293445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111298667_111299593
transcript_28315.known	chr11	-	391	2	FSM	ENSG00000196167.10	ENST00000526150.1	391	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGACAATCAATGATT	NA	False	NA	-13	True	TTTAAA	-16	NA	111300009	111298342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111298667_111299942
transcript_28316.nic	chr11	-	1194	5	FSM	ENSG00000137707.14	ENST00000692032.1	1242	5	48	0	1	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTAGTTCAGTTTGTTG	-111512323	True	NA	NA	False	AATAAA	-19	NA	111512338	111494814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111495315_111497210_111497410_111497997_111498136_111498603_111498803_111512180
transcript_28317.known	chr11	-	1394	4	FSM	ENSG00000137707.14	ENST00000525791.5	1394	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCTCCTTTGTAACTTA	-111512324	True	NA	NA	False	ATTAAA	-30	NA	111512339	111496511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111497410_111497997_111498136_111498603_111498803_111512180
transcript_2832.known	chr1	-	778	4	FSM	ENSG00000188529.15	ENST00000473858.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	310.274430500198	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGTATGGTCCAATATA	-23943684	True	NA	NA	False	NA	NA	NA	23980331	23967300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23980190
transcript_28322.known	chr11	+	9622	15	FSM	ENSG00000170145.5	ENST00000304987.4	9622	15	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_3	4.84715359352101	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCGGGTGATGTGAATGTC	111600073	True	NA	16	True	AATAAA	-20	NA	111602448	111730855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111602699_111616242_111616360_111620338_111620403_111688000_111688163_111700885_111701011_111701451_111701576_111703202_111703424_111704986_111705140_111712210_111712376_111719774_111720004_111720477_111720763_111720898_111721063_111721829_111721941_111722664_111722757_111723495
transcript_28324.known	chr11	-	2082	16	FSM	ENSG00000137713.16	ENST00000311129.9	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	183.174403840226	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCGAACGAAATTTTTACC	-111760830	True	NA	-9	True	AATAAA	-23	NA	111766382	111726907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111727058_111737447_111737570_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111753442_111753578_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_28325.known	chr11	-	1953	14	FSM	ENSG00000137713.16	ENST00000341980.10	1953	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	157.013247094994	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTCCTGCATCCTCACTG	-111760816	True	NA	32	True	NA	NA	NA	111766368	111741320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111741613_111742052_111742145_111742522_111742666_111743375_111743531_111747953_111748015_111752158_111752333_111754498_111754570_111754979_111755095_111755294_111755451_111759803_111759952_111760818_111761052_111764804_111764906_111765293_111765385_111766247
transcript_28328.known	chr11	-	2345	15	FSM	ENSG00000086848.15	ENST00000398006.6	2345	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	20.1834696962537	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	-111871289	False	926	-6	True	AATAAA	-17	NA	111871301	111786283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_28329.known	chr11	-	2028	15	FSM	ENSG00000086848.15	ENST00000614444.4	2028	15	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_14	10.903332199893	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGTCTATTTCAAAGTCT	-111870607	True	NA	22	True	AATAAA	-45	NA	111871533	111786255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838379_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_28330.known	chr11	-	1930	15	FSM	ENSG00000086848.15	ENST00000531154.5	1930	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	23.1851465470495	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGAATCTGGGTGCTCT	-111870853	False	NA	-6	True	AATAAA	-17	NA	111870865	111786283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111870774
transcript_28331.known	chr11	-	6158	15	FSM	ENSG00000086848.15	ENST00000616540.5	6158	15	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_5	16.4651766105416	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTTTTCTTAATGTGA	-111871569	False	NA	-19	True	AATAAA	-15	NA	111871581	111782194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111786521_111809642_111809774_111836164_111836295_111837467_111837616_111838248_111838400_111840654_111840810_111844600_111844724_111853379_111853486_111853648_111853737_111857601_111857738_111860546_111860636_111865180_111865252_111868601_111868737_111870231_111870371_111871351
transcript_28337.known	chr11	+	509	5	FSM	ENSG00000137720.8	ENST00000530799.5	509	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	58.0215477215146	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGAACTGGATCCTCC	111877516	False	NA	NA	False	NA	NA	NA	111879560	111883805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879606_111881484_111881616_111882367_111882599_111883135_111883203_111883770
transcript_28338.known	chr11	-	2774	5	FSM	ENSG00000255561.7	ENST00000260257.9	2774	5	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_4	3.96074487943871	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGGTCTGTTTGACTC	-111878943	True	NA	NA	False	AATAAA	-20	NA	111879165	111874055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878555_111878713_111878960
transcript_28341.known	chr11	+	534	4	FSM	ENSG00000137720.8	ENST00000528125.5	534	4	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	51.8609251320834	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAAGATCTTAATATTG	111878847	True	NA	NA	False	NA	NA	NA	111878934	111883900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879041_111882367_111882599_111883135_111883203_111883770
transcript_28343.known	chr11	+	2568	4	FSM	ENSG00000137720.8	ENST00000260276.8	2568	4	0	0	0	0	multi-exon	TRUE	canonical	3	121	junction_3	15.5777619273972	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCTGGGCTACTA	111877496	True	NA	NA	False	AATAAA	-14	NA	111879540	111885975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879606_111882367_111882599_111883135_111883203_111883770
transcript_28345.known	chr11	-	2206	4	FSM	ENSG00000255561.7	ENST00000531487.1	2206	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	9.62635271879577	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGGAGTCTTGCTCTGCCG	-111879445	True	NA	NA	False	NA	NA	NA	111879457	111874758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111876105_111876480_111876640_111876807_111877012_111878960
transcript_28349.known	chr11	+	599	3	FSM	ENSG00000137720.8	ENST00000530214.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	48	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCTTTATCCCTTTTTTT	111877497	True	NA	NA	False	AATAAA	-22	NA	111879541	111884074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111879606_111882367_111882599_111883770
transcript_2835.known	chr1	-	1808	6	FSM	ENSG00000188529.15	ENST00000453840.7	1808	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	596.572543786588	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATTCCTTAGTTT	-23943649	True	NA	-2	True	AATAAA	-23	NA	23980296	23966444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23967724_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_28352.known	chr11	+	882	4	FSM	ENSG00000149300.10	ENST00000527286.5	882	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.589211407093	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCATTGTTGCTCCTGCTC	111918674	False	NA	NA	False	NA	NA	NA	111918996	111926478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111919260_111924325_111924364_111925652_111925715_111925959
transcript_28354.known	chr11	-	1107	4	FSM	ENSG00000109846.9	ENST00000527899.6	1107	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	5.31245915016974	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATAACTGTCTTGTGTTTG	NA	False	NA	-2	True	AATAAA	-16	NA	111913347	111908625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913104
transcript_28355.known	chr11	-	941	4	FSM	ENSG00000109846.9	ENST00000616970.5	941	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.73488351136175	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAACTGTCTTGTGTTTGAA	-111913121	True	NA	0	True	AATAAA	-18	NA	111913213	111908623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111913138
transcript_28356.known	chr11	-	887	4	FSM	ENSG00000109846.9	ENST00000527950.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.48331477354788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTGTCTTGTGTTTGAAT	-111923701	False	NA	1	True	AATAAA	-19	NA	111923722	111908622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523_111911923_111923702
transcript_28357.known	chr11	-	774	3	FSM	ENSG00000109846.9	ENST00000650687.2	774	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTATGATTGCATTAT	-111911678	False	NA	60	True	AATAAA	-18	NA	111911770	111908563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_111908968_111910326_111910450_111911523
transcript_28358.known	chr11	+	843	2	FSM	ENSG00000170276.6	ENST00000304298.4	843	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGTACTGCTCCCTA	111912666	True	NA	NA	False	AATAAA	-16	NA	111912733	111914093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111912924_111913440
transcript_2836.known	chr1	-	2917	6	FSM	ENSG00000188529.15	ENST00000343255.9	2917	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	601.9014537281	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAATGATTAACTGGAAT	-23943680	True	NA	NA	False	AATAAA	-14	NA	23980327	23969082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23971440_23971572_23971624_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_28360.known	chr11	+	1945	6	FSM	ENSG00000150764.14	ENST00000529225.5	1945	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.4841854806767	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	111926821	False	NA	NA	False	ATTAAA	-15	NA	111927143	111975995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111927388_111929817_111929911_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_28364.nic	chr11	+	2007	5	ISM	ENSG00000150764.14	ENST00000440460.7	5826	20	-182	46658	-182	0	5prime_fragment	FALSE	canonical	3	30	junction_3	3.20156211871642	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTCAGTGGCATTTAGTA	111937103	False	NA	NA	False	ATTAAA	-15	NA	111937160	111975995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875
transcript_28366.known	chr11	+	4825	16	FSM	ENSG00000150764.14	ENST00000615255.1	4825	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.45774227228089	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	111977160	True	NA	NA	False	NA	NA	NA	111977308	112021979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111977795_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_28367.known	chr11	+	5826	20	FSM	ENSG00000150764.14	ENST00000440460.7	5826	20	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.20070588422027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAATTTCCTCAAGTGATC	111936844	True	NA	8	True	AATAAA	-21	NA	111937342	112022653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_111937560_111964548_111964679_111968512_111968639_111974022_111974255_111974875_111974984_111980736_111980850_111982338_111982488_111985231_111985322_111986870_111986925_111989004_111989056_111992414_111992520_111992950_111993005_111993495_111993589_111993668_111993741_111995018_111995109_111995402_111995565_111996079_111996147_112016690_112016797_112017776_112017886_112018955
transcript_28369.known	chr11	+	3825	14	FSM	ENSG00000150768.17	ENST00000681316.1	3825	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	188.15475815868	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043471_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_2837.known	chr1	-	1089	5	FSM	ENSG00000188529.15	ENST00000484146.6	1089	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	744.178741969965	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACATGCAGTTTACATC	-23943709	True	NA	NA	False	NA	NA	NA	23980356	23967172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_23967724_23971849_23972013_23974973_23975078_23978712_23978818_23980190
transcript_28373.known	chr11	+	3723	13	FSM	ENSG00000150768.17	ENST00000681339.1	3723	13	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	174.516713621743	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATAAATCTTCAATATGT	112016251	True	NA	-11	True	AAAAAG	-44	NA	112025425	112064375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_28378.known	chr11	+	3517	12	FSM	ENSG00000150768.17	ENST00000393051.5	3517	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	197.79470114655	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTCTGGTTTAATTTTTG	112016265	True	NA	4	True	ATTAAA	-15	NA	112025439	112064390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112028514_112028640_112028791_112028946_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_28380.known	chr11	+	3552	12	FSM	ENSG00000150768.17	ENST00000680331.1	3552	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	201.747530630991	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGTCTGGTTTAATTTTT	112016265	True	NA	3	True	ATTAAA	-14	NA	112025439	112064389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112025752_112026197_112026300_112033403_112033531_112037272_112037461_112039243_112039398_112043465_112043534_112045137_112045231_112045862_112045971_112051233_112051350_112059902_112060066_112061037_112061175_112062405
transcript_28384.known	chr11	+	943	7	FSM	ENSG00000150776.18	ENST00000524989.1	943	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	29.6910012555245	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTGAGAGCTCAGAGGA	112072988	True	NA	NA	False	NA	NA	NA	112074315	112082945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112074886_112074917_112075566_112075651_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_28388.known	chr11	-	1932	6	FSM	ENSG00000150773.12	ENST00000528775.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.22490309931942	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTACATCAAGTAGCTG	-112073961	True	NA	NA	False	AATAAA	-16	NA	112074013	112063217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112064222_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
transcript_28389.known	chr11	+	2322	6	FSM	ENSG00000150776.18	ENST00000420986.6	2322	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.7348280640733	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCGGTCTTGGTTCTG	NA	False	NA	4	True	AGTAAA	-16	NA	112074085	112084134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082467
transcript_28399.known	chr11	-	1103	6	FSM	ENSG00000150773.12	ENST00000532211.5	1103	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	2.22710574513201	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	-112073948	False	NA	NA	False	ATTAAA	-21	NA	112073980	112067797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073929
transcript_28400.known	chr11	+	355	5	FSM	ENSG00000150776.18	ENST00000526879.5	355	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	29.8705540624877	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGGAATAAAAAGTTCTAT	112072988	True	NA	-23	True	AATGAA	-41	NA	112074315	112080512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112074886_112074917_112075566_112075644_112078214_112078316_112080408
transcript_28402.known	chr11	+	2246	4	FSM	ENSG00000150776.18	ENST00000530104.2	2246	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	29.6010510323911	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATAAAAGCTTCTATTTT	112072982	True	NA	NA	False	ATTAAA	-18	NA	112074309	112082427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112075566_112075644_112078214_112078316_112080408
transcript_28409.known	chr11	-	1090	6	FSM	ENSG00000150773.12	ENST00000280350.10	1090	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.78567765543682	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTAGTAGTTTATCTTAA	-112073965	True	NA	NA	False	ATTAAA	-21	NA	112074017	112067797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112068006_112070435_112070702_112071037_112071284_112071634_112071759_112072997_112073206_112073979
transcript_28410.known	chr11	+	3686	6	FSM	ENSG00000150776.18	ENST00000393047.8	3686	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	12.3515181253156	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATCTTTTACTTTTT	112072971	True	NA	8	True	AATAAA	-19	NA	112074298	112085150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074917_112075566_112075644_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_28411.known	chr11	+	809	6	FSM	ENSG00000150776.18	ENST00000525785.5	809	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	31.3534687076247	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACACTAAGAAAACCAA	112073003	True	NA	NA	False	NA	NA	NA	112074330	112082822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112074359_112075566_112075685_112078214_112078316_112080408_112080559_112081981_112082036_112082464
transcript_28412.known	chr11	-	805	2	FSM	ENSG00000150779.12	ENST00000541231.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	3	2079	junction_1	0	10198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGGC	-112070159	True	NA	NA	False	AAGAAA	-14	NA	112086798	112084816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112085463_112086639
transcript_28413.known	chr11	-	741	3	FSM	ENSG00000150779.12	ENST00000507614.1	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	209.5	1968	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAGTGAAATTTATTTA	-112070083	True	NA	-32	True	AGTAAA	-13	NA	112086722	112085148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112085463_112085966_112086311_112086639
transcript_28416.nnic	chr11	+	1298	6	NIC	ENSG00000255292.9	novel	566	6	NA	NA	-30	-6804	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1104.61801542434	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACCTTGTATGAGTTGGCT	112073797	True	NA	NA	False	AATAAA	-20	NA	112086872	112172556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_112086960_112087856_112087974_112088866_112089012_112170418_112170531_112170622_112170675_112171771
transcript_28424.known	chr11	+	790	3	FSM	ENSG00000204370.13	ENST00000525291.5	790	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTAGACAGTGTTTAATT	112073823	True	NA	NA	False	AATAAA	-12	NA	112086898	112095388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112086960_112088866_112089012_112094804
transcript_28425.known	chr11	+	1339	4	FSM	ENSG00000204370.13	ENST00000375549.8	1339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1066.40923976992	13003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTAGCTATCAGTAGTT	112073797	True	NA	27	True	AATAAA	-35	NA	112086872	112095794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112094804
transcript_28426.known	chr11	+	1074	4	FSM	ENSG00000204370.13	ENST00000528021.6	1074	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1066.40923976992	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGATAATGGCTTGGTT	112073797	True	NA	NA	False	AATAAA	-17	NA	112086872	112120016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112086960_112087856_112087974_112088866_112089012_112119291
transcript_28427.known	chr11	-	1115	6	FSM	ENSG00000150782.12	ENST00000280357.12	1115	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.979795897113271	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGAACTGTCTGAATT	-112163996	True	NA	NA	False	AATAAA	-29	NA	112164094	112143259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112143818_112148602_112148737_112150071_112150207_112153591_112153604_112154974_112155062_112163905
transcript_28428.known	chr11	-	795	6	FSM	ENSG00000150782.12	ENST00000528832.1	795	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.09544511501033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTAAAATTTCATGCCGG	-112163991	True	NA	NA	False	NA	NA	NA	112164089	112143595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_112143818_112148602_112148737_112150071_112150207_112153591_112153604_112154974_112155083_112163905
transcript_28429.nnic	chr11	-	911	3	NNC	ENSG00000150779.12	novel	1155	3	NA	NA	-131939	4	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1039.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGAAATTTATTTATTTG	NA	False	NA	-28	True	AGTAAA	-17	NA	112218737	112085144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_112085463_112086639_112086740_112218244
transcript_2843.nic	chr1	-	1042	6	ISM	ENSG00000185436.12	ENST00000374421.7	1476	7	-41	1722	0	148	5prime_fragment	FALSE	canonical	3	31	junction_1	18.744599222176	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTGCCTTAAGTTCCTTT	-24186093	True	NA	NA	False	AATAAA	-24	NA	24187289	24158851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24159183_24159473_24159634_24161541_24161685_24169416_24169602_24180730_24180855_24187190
transcript_28436.known	chr11	+	872	6	FSM	ENSG00000150787.8	ENST00000280362.8	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_2	20.5387438759044	1663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTGGAGACAATATATATA	112224226	False	NA	NA	False	AATAAA	-18	NA	112226427	112233973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112226527_112228593_112228674_112230207_112230231_112230625_112230683_112233162_112233234_112233431
transcript_28437.known	chr11	+	1069	2	FSM	ENSG00000150787.8	ENST00000525645.1	1069	2	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGCCTCCCGAGTAGCT	112224167	True	NA	NA	False	NA	NA	NA	112226368	112229504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112226527_112228593
transcript_28438.known	chr11	+	625	4	FSM	ENSG00000150787.8	ENST00000525803.1	625	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	213.894574239014	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGTGTGGGATTATT	112224230	False	NA	25	True	ATTAAA	-22	NA	112226431	112233810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112226527_112228593_112228674_112233162_112233234_112233431
transcript_28439.nnic	chr11	+	751	3	FSM	ENSG00000250303.5	ENST00000689463.1	713	3	-35	-3	14	0	multi-exon	FALSE	canonical	1	2	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCCCATCATTTCTGCCA	112290152	True	NA	NA	False	AATAAA	-19	NA	112290237	112294119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112290510_112291319_112291406_112293726
transcript_28441.known	chr11	+	3011	2	FSM	ENSG00000250303.5	ENST00000666993.1	3011	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAATGAGGTAATAAAATC	112290178	True	NA	NA	False	AAAAAG	-27	NA	112290263	112294084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112290510_112291319
transcript_28442.known	chr11	+	2191	3	FSM	ENSG00000250303.5	ENST00000529938.2	2191	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAATAAAATCATTACTGA	NA	False	NA	NA	False	AAAAAG	-35	NA	112290217	112294092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_112290510_112291246_112292780_112293726
transcript_28447.known	chr11	-	949	4	FSM	ENSG00000255129.7	ENST00000526487.6	949	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.2192186706253	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATGGAGGTCTGAAAACC	NA	False	NA	NA	False	NA	NA	NA	113314482	113278249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113278744_113279489_113279650_113280490_113280633_113314329
transcript_28451.known	chr11	-	517	3	FSM	ENSG00000255129.7	ENST00000533504.2	556	3	38	1	38	-1	multi-exon	FALSE	canonical	2	9	junction_2	6	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTCTGTGTTATTAT	-113314317	True	NA	NA	False	AATAAA	-14	NA	113314437	113279382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113279650_113280490_113280633_113314329
transcript_28453.known	chr11	+	2256	22	FSM	ENSG00000149292.17	ENST00000529221.6	2256	22	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	5.01562185427032	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCAGAATCAAGTACTCAT	113314248	True	NA	7	True	AATAAA	-18	NA	113314582	113366387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285_113339475_113340663_113340734_113341836_113341926_113344271_113344441_113350072_113350166_113351238_113351300_113352069_113352208_113359362_113359462_113359939_113360009_113362400_113362503_113363827_113363928_113364834_113365061_113366224
transcript_28460.nic	chr11	+	1051	10	ISM	ENSG00000149292.17	ENST00000529221.6	2256	22	-33	26772	-29	60	5prime_fragment	FALSE	canonical	3	9	junction_1	5.84575397242929	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGCACAAGAAATGTCC	113314215	True	NA	NA	False	ATTAAA	-27	NA	113314549	113339615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_113314619_113316242_113316316_113323287_113323452_113323993_113324016_113324604_113324683_113325523_113325646_113329919_113329980_113334965_113335038_113338773_113338835_113339285
transcript_28464.known	chr11	-	2873	16	FSM	ENSG00000086827.9	ENST00000200135.8	2873	16	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	18.3985506675571	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	-113770473	True	NA	-5	True	AATAAA	-16	NA	113773692	113733186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113757661_113757854_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_28467.nnic	chr11	-	2752	15	NIC	ENSG00000086827.9	novel	2873	16	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_9	64.8629638671611	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGGGTGAGTGTCTTTAA	-113770544	True	NA	-5	True	AATAAA	-16	NA	113773763	113733186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_113733815_113736619_113736823_113737571_113737704_113738263_113738395_113739212_113739383_113741693_113741766_113743801_113744041_113747530_113747714_113748256_113748421_113758553_113758707_113760208_113760369_113760512_113760591_113760816_113760919_113768832_113768968_113773561
transcript_28478.known	chr11	-	1900	15	FSM	ENSG00000048028.11	ENST00000537706.5	1900	15	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_7	61.8321047973742	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTTGTTCTGTTTCTT	-113865214	True	NA	NA	False	AATAAA	-14	NA	113875528	113813754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_2848.known	chr1	-	674	4	FSM	ENSG00000185436.12	ENST00000374418.3	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	2.82842712474619	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	-24186052	True	NA	-11	True	AATAAA	-15	NA	24187248	24161377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24161685_24169416_24169602_24180730_24180855_24187190
transcript_28488.known	chr11	-	4669	25	FSM	ENSG00000048028.11	ENST00000003302.8	4669	25	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_7	168.364415447234	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGTGTGCAGTATGGTC	-113865256	True	NA	-6	True	AATAAA	-15	NA	113875570	113797873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113806488_113806585_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113852500_113852634_113854257_113854336_113875444
transcript_28489.known	chr11	-	3431	22	FSM	ENSG00000048028.11	ENST00000545540.5	3431	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_21	135.886323706698	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAGATTAGAAATATAAA	-113865256	True	NA	NA	False	AATACA	-26	NA	113875570	113798804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_113799416_113801482_113801679_113803157_113803282_113803797_113803878_113804672_113804752_113804867_113805047_113808297_113808438_113809062_113809255_113812275_113812505_113813884_113813956_113815173_113815383_113817657_113817838_113823604_113823701_113827232_113827361_113829196_113829346_113830866_113830944_113831919_113831994_113833419_113833558_113834248_113834336_113840597_113840758_113841662_113841769_113875444
transcript_28490.known	chr11	+	2205	9	FSM	ENSG00000166736.12	ENST00000504030.7	2205	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_7	6.26498204307083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCTTCTTTTTTTTTTCT	113974335	True	NA	5	True	AATAAA	-19	NA	113975107	113990313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986014_113986176_113986517_113986729_113986824_113987047_113989464
transcript_28492.known	chr11	+	1385	8	FSM	ENSG00000166736.12	ENST00000510849.5	1385	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	13.9970842444753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCAGGACCCAGGGAATG	113974513	False	NA	NA	False	NA	NA	NA	113975285	113989832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_113975393_113977770_113977923_113979232_113979278_113981202_113981313_113983119_113983290_113986517_113986729_113986824_113987047_113989464
transcript_28503.known	chr11	+	1080	7	FSM	ENSG00000076043.11	ENST00000265881.10	1080	7	0	0	0	0	multi-exon	TRUE	canonical	3	756	junction_4	81.5381642068438	9116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426082	True	NA	32	True	AATAAA	-39	NA	114439466	114450279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_28504.known	chr11	+	791	7	FSM	ENSG00000076043.11	ENST00000539754.5	791	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	328.399993233184	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCTGATGGCTTGGCAGAG	114426086	True	NA	NA	False	NA	NA	NA	114439470	114450039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114443855_114443934_114444585_114444653_114445978_114446088_114447825_114447880_114449845
transcript_28508.known	chr11	+	880	7	FSM	ENSG00000076043.11	ENST00000544827.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	328.901581023868	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTATTGAAATGCAAACCT	114440092	False	NA	15	True	AATAAA	-22	NA	114440120	114450262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114440147_114440655_114440740_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_2851.nnic	chr1	-	596	3	NIC	ENSG00000185436.12	novel	674	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_2	32.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGACCTACAGGAGGCCT	-24186098	True	NA	-11	True	AATAAA	-15	NA	24187294	24161377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_24161685_24169416_24169602_24187190
transcript_28517.known	chr11	+	664	6	FSM	ENSG00000076043.11	ENST00000539119.5	664	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	354.297389208557	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGTTAACTTGCATCTC	114426197	False	NA	NA	False	NA	NA	NA	114439581	114450062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114443855_114443934_114444540_114444653_114445978_114446088_114447825_114447880_114449845
transcript_28528.known	chr11	+	449	5	FSM	ENSG00000076043.11	ENST00000538198.5	449	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	383.70911834357	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGATGAAAAGAAGAGGAAAA	114426161	True	NA	NA	False	AAGAAA	-6	NA	114439545	114449917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114445978_114446088_114447825_114447880_114449845
transcript_2853.known	chr1	+	2834	16	FSM	ENSG00000158055.17	ENST00000361548.9	2834	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	2.67830792354676	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCACATGCTGCTCTCGTT	24319282	True	NA	NA	False	AATAAA	-28	NA	24319356	24355318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24319569_24331425_24331613_24334644_24334707_24336481_24336828_24337077_24337152_24337635_24337790_24337991_24338104_24339667_24339763_24342114_24342274_24342693_24342773_24342891_24343026_24344896_24344932_24346552_24346642_24347467_24347554_24350057_24350123_24354373
transcript_28537.known	chr11	+	539	4	FSM	ENSG00000076043.11	ENST00000543131.5	539	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	440.685324869748	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCTTCGGTTAACTTG	114426126	True	NA	NA	False	NA	NA	NA	114439510	114450056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114445978_114446088_114447825_114447880_114449845
transcript_28539.known	chr11	+	867	3	FSM	ENSG00000076053.12	ENST00000545678.1	867	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	326.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTGCAAGAAATTTCTT	114394809	True	NA	NA	False	GATAAA	-30	NA	114400673	114408123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114400768_114405705_114405800_114407444
transcript_28540.known	chr11	+	452	3	FSM	ENSG00000076043.11	ENST00000544196.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	421	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTGTTTTTTTCTGTT	114426081	True	NA	4	True	AATAAA	-16	NA	114439465	114441902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114441744
transcript_28541.known	chr11	+	848	3	FSM	ENSG00000076043.11	ENST00000544010.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_2	42.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGTGCAAAGATGGCAG	114426050	True	NA	NA	False	AAGAAA	-4	NA	114439434	114444378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114443855
transcript_28542.known	chr11	+	710	3	FSM	ENSG00000076043.11	ENST00000539275.5	710	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	421.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTGTACCATCTATTC	114426099	True	NA	32	True	AATAAA	-39	NA	114439483	114450279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655_114440740_114449845
transcript_28545.known	chr11	+	552	2	FSM	ENSG00000076043.11	ENST00000543243.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	850	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTATATGTCTTTGT	114426110	True	NA	NA	False	NA	NA	NA	114439494	114441026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114439676_114440655
transcript_28546.known	chr11	-	1980	1	FSM	ENSG00000180425.11	ENST00000623205.2	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGTTCCTAAGGAACT	-114399839	True	NA	NA	False	AATAAA	-19	NA	114400511	114398531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_114398500_114400500
transcript_28547.known	chr11	+	4243	5	FSM	ENSG00000076053.12	ENST00000540163.5	4243	5	0	0	0	0	multi-exon	TRUE	canonical	3	263	junction_3	155.551438437579	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTAAGTACAAAATTCTCAA	114398702	True	NA	NA	False	AATAAA	-18	NA	114400029	114410607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114400768_114401697_114401861_114402827_114402916_114405708_114405800_114407444
transcript_28548.known	chr11	+	1908	5	FSM	ENSG00000076053.12	ENST00000542140.5	1908	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	257.315346413695	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGGTGTGTGTTATTTT	114394801	True	NA	6	True	TATAAA	-2	NA	114400665	114408909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114400768_114401697_114401861_114402831_114402916_114405705_114405800_114407444
transcript_28549.known	chr11	+	726	5	FSM	ENSG00000076043.11	ENST00000546316.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	384.597191877424	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTATTGAAATGCAAACC	114440641	True	NA	14	True	AATAAA	-21	NA	114440670	114450261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_114440740_114443855_114443934_114445978_114446088_114447825_114447880_114449845
transcript_28554.known	chr11	-	2192	10	FSM	ENSG00000137656.12	ENST00000260210.5	2192	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	13.4329611197399	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTTCTTAACTGGGTAT	-116769194	True	NA	-10	True	AATAAA	-22	NA	116772987	116748172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762552_116763267_116765361_116765447_116770128_116770223_116772821
transcript_28555.known	chr11	-	1793	10	FSM	ENSG00000137656.12	ENST00000375445.7	1793	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	39.3615717843347	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTTAACTGGGTATTCT	-116769194	True	NA	-7	True	AATAAA	-25	NA	116772987	116748169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116748576_116757145_116757228_116757765_116757951_116758268_116758408_116759073_116759180_116760734_116760953_116762954_116763267_116765361_116765447_116770128_116770223_116772821
transcript_28570.known	chr11	-	6539	14	FSM	ENSG00000109917.11	ENST00000227322.8	6539	14	0	0	0	0	multi-exon	TRUE	canonical	3	585	junction_6	32.8363343275556	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAGTGTTAGAATTCATT	-116781782	True	NA	2	True	AATAAA	-22	NA	116788023	116773798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116779060_116779771_116779838_116782157_116782245_116782918_116783030_116783529_116783620_116784377_116784449_116784854_116784922_116785098_116785147_116785513_116785637_116785795_116785883_116786510_116786582_116786968_116787060_116787481_116787644_116787819
transcript_28572.known	chr11	-	899	4	FSM	ENSG00000118137.10	ENST00000236850.5	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCTTCTTTCTTTTGGGA	-116837607	False	NA	2	True	AATAAA	-18	NA	116837622	116835750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_116836412_116837000_116837158_116837344_116837408_116837604
transcript_28573.known	chr11	+	4175	6	FSM	ENSG00000168092.14	ENST00000527958.6	4175	6	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	56.1177333825948	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGGTGTCTTTCTGTC	117124582	True	NA	23	True	TATAAA	-19	NA	117144286	117171045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117167420
transcript_28576.known	chr11	+	1056	6	FSM	ENSG00000168092.14	ENST00000529887.6	1056	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	268.185309068189	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTTCATTGGAACAAGG	117124593	True	NA	NA	False	AGTAAA	-27	NA	117144297	117176422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117144419_117152440_117152529_117159933_117160024_117161144_117161262_117163769_117163893_117175905
transcript_28581.known	chr11	-	4197	17	FSM	ENSG00000160613.15	ENST00000320934.8	4197	17	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_16	18.1482609359685	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCGTAGCCTGTCATGCCG	-117229945	True	NA	NA	False	NA	NA	NA	117232073	117204336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117206357_117206680_117206799_117207066_117207161_117207969_117208065_117208896_117209054_117218465_117218569_117219056_117219165_117219590_117219759_117223207_117223309_117224077_117224217_117224700_117224756_117225930_117226022_117227156_117227323_117228215_117228351_117229376_117229857_117230348_117230469_117232026
transcript_28582.known	chr11	+	1048	6	FSM	ENSG00000149591.17	ENST00000525531.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	222.515078140786	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTTACCCGAAAGCATC	117191982	True	NA	NA	False	NA	NA	NA	117199381	117204541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117199433_117199632_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_28585.known	chr11	+	1477	5	FSM	ENSG00000149591.17	ENST00000278968.10	1477	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.817650377196	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTCTCAGGCCTGGCTG	117191994	True	NA	7	True	NA	NA	NA	117199393	117204782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117199830_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_28590.known	chr11	+	3786	5	FSM	ENSG00000149591.17	ENST00000392951.9	3786	5	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	35.3447308661418	1629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGCCTAGAGAATACCTAA	117191970	True	NA	NA	False	ATTAAA	-18	NA	117199369	117207464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117199433_117203001_117203194_117203306_117203485_117203781_117203885_117204214
transcript_28597.known	chr11	+	3477	15	FSM	ENSG00000167257.11	ENST00000300650.9	3477	15	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	10.2720643554472	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGTTAACTTTTTAAAAAAA	117230841	True	NA	NA	False	ATTAAA	-15	NA	117232670	117286454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_28600.known	chr11	+	1706	15	FSM	ENSG00000167257.11	ENST00000531287.5	1706	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	28.201986469331	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAAGAAGAAGAGAAAC	117230906	True	NA	NA	False	NA	NA	NA	117232735	117285164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117232776_117234266_117234380_117238600_117238647_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_28601.known	chr11	+	2695	15	FSM	ENSG00000167257.11	ENST00000531452.5	2695	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	21.7443401033605	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTAGTAGTTTGACTTCTT	117230906	True	NA	6	True	GATAAA	-31	NA	117232735	117285688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117232776_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808_117246949_117279907_117280005_117280170_117280260_117281313_117281405_117281599_117281699_117281893_117282271_117282403_117282537_117282745_117282851_117283114_117283211_117285085
transcript_2861.known	chr1	+	1676	12	FSM	ENSG00000001461.17	ENST00000339255.2	1676	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.9444950453169	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	24414802	True	NA	-22	True	ATTAAA	-1	NA	24415813	24466310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_28613.nic	chr11	+	1134	6	ISM	ENSG00000167257.11	ENST00000300650.9	3477	15	-49	39442	-3	172	5prime_fragment	FALSE	canonical	3	68	junction_1	11.2356575241505	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTTGTAGTTTCTTTCC	117230792	True	NA	NA	False	AATAAA	-44	NA	117232621	117247012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_117232727_117234266_117234380_117238600_117239112_117239800_117239861_117244444_117244586_117246808
transcript_2862.known	chr1	+	5372	12	FSM	ENSG00000001461.17	ENST00000374399.9	5372	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.0271130167092	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGAGTTCGTGTCTTAT	24414790	True	NA	4	True	ATTAAA	-15	NA	24415801	24472976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290_24419641_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24468985
transcript_28621.nic	chr11	+	520	5	ISM	ENSG00000110274.16	ENST00000278935.8	5629	33	-25	61324	-21	0	5prime_fragment	FALSE	canonical	0	0	junction_1	14.2894191624432	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAGACAAGAAGG	NA	False	NA	NA	False	AAGAAA	-9	NA	117327828	117351942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_117327905_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_28622.known	chr11	+	585	5	FSM	ENSG00000110274.16	ENST00000527609.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.12414379544733	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACAGAGACCCCCCCAAA	117327221	False	NA	NA	False	AAAAAG	-17	NA	117328084	117351959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117328209_117335604_117335681_117338565_117338669_117344165_117344278_117351789
transcript_28628.nnic	chr11	+	438	4	NIC	ENSG00000110274.16	novel	5629	33	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	15.369522511198	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAGACAAGAAGG	NA	False	NA	NA	False	AAGAAA	-9	NA	117327834	117351942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_117327905_117338565_117338669_117344165_117344278_117351789
transcript_28629.nic	chr11	+	702	4	ISM	ENSG00000110274.16	ENST00000525416.5	778	5	-81	10003	-2	0	5prime_fragment	FALSE	canonical	0	0	junction_2	14.7648230602334	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAAGAAAGACAAGAAGG	117326984	True	NA	NA	False	AAGAAA	-9	NA	117327847	117351942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_117328209_117335604_117335681_117344165_117344278_117351789
transcript_28632.known	chr11	+	774	1	FSM	ENSG00000278768.3	ENST00000618857.1	774	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGCCTTCTGACCATCA	117292787	False	NA	6	True	AATAAA	-18	NA	117292797	117293571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117292800_117293600
transcript_28633.known	chr11	+	492	4	FSM	ENSG00000110274.16	ENST00000533570.1	492	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	9.2736184954957	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACAGAGACCCCCCCAAAA	117328091	True	NA	NA	False	AAAAAG	-18	NA	117328102	117351960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_117328209_117338565_117338669_117344165_117344278_117351789
transcript_28636.known	chr11	-	634	11	FSM	ENSG00000255245.4	ENST00000614497.5	634	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	100.954494699345	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTGGCATCGCCAACTC	-117874609	True	NA	-82	True	NA	NA	NA	117876628	117820221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_28639.known	chr11	-	579	9	FSM	ENSG00000137726.17	ENST00000530956.6	579	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	88.6904729945669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAACAGCCCTTTCCCCA	-117874670	True	NA	NA	False	AAGAAA	-12	NA	117876689	117838207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117844109_117844207_117876591
transcript_2864.nnic	chr1	+	1338	11	NIC	ENSG00000001461.17	novel	1676	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	22.6205658638328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	24414790	True	NA	-22	True	ATTAAA	-1	NA	24415801	24466310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_24415905_24440171_24440241_24442054_24442227_24445184_24445245_24449480_24449627_24453407_24453505_24456137_24456274_24458887_24458977_24460480_24460545_24464025_24464121_24466003
transcript_28645.known	chr11	-	1678	8	FSM	ENSG00000137726.17	ENST00000526014.6	1678	8	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_7	13.2649607490361	603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTCGGAGGTGCTTTCC	-117874639	True	NA	-9	True	AATAAA	-18	NA	117876658	117836980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117838278_117839780_117839831_117840318_117840369_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_28648.known	chr11	-	669	7	FSM	ENSG00000137726.17	ENST00000584394.5	669	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	76.8288140391785	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGAGCCACATGGCCATCT	-117874645	True	NA	NA	False	NA	NA	NA	117876664	117837945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117838278_117839780_117839831_117841147_117841185_117841790_117841866_117841989_117842029_117842718_117842782_117876591
transcript_28649.known	chr11	-	991	6	FSM	ENSG00000137731.14	ENST00000534383.5	991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.09544511501033	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACCTGCCTGCCTGTCT	NA	False	NA	-7	True	AATAAA	-25	NA	117824744	117820146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117824161
transcript_28650.known	chr11	-	589	6	FSM	ENSG00000137731.14	ENST00000292079.7	589	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.35646599662505	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATTGCTCAGGCACCTGT	NA	False	NA	83	True	AATACA	-25	NA	117824744	117820056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_117820373_117820665_117820697_117820858_117820896_117822405_117822481_117822678_117822718_117824653
transcript_28660.known	chr11	+	2074	13	FSM	ENSG00000137648.19	ENST00000517483.5	2074	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.23322071557906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATCTCTGGCATAGGCTA	118077036	True	NA	NA	False	ATTAAA	-10	NA	118077077	118118444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118077306_118094821_118094866_118098984_118099099_118103100_118103254_118104690_118104821_118107773_118107876_118108855_118108897_118111740_118111901_118113268_118113436_118114828_118114928_118115137_118115281_118117304_118117455_118117901
transcript_28661.known	chr11	+	2052	13	FSM	ENSG00000137648.19	ENST00000522824.5	2052	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	1.23322071557906	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTAGCTGGAATGCTTG	118077052	True	NA	NA	False	ATTAAA	-23	NA	118077093	118118457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118077306_118094815_118094856_118098984_118099099_118103100_118103254_118104690_118104821_118107788_118107876_118108855_118108897_118111740_118111901_118113268_118113436_118114828_118114928_118115137_118115281_118117304_118117455_118117901
transcript_28663.nic	chr11	-	802	3	ISM	ENSG00000177098.9	ENST00000324727.9	4487	5	-105	10372	-40	-2543	5prime_fragment	FALSE	canonical	3	7	junction_2	3	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGACCGTGTTGGTGTTTTC	NA	False	NA	NA	False	NA	NA	NA	118152928	118143748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_118144062_118145056_118145230_118152612
transcript_28664.known	chr11	-	1959	9	FSM	ENSG00000160593.19	ENST00000292067.11	1959	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.661437827766148	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTGGCACATTATTTCTA	NA	False	NA	NA	False	GATAAA	-18	NA	118213359	118193962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118194418_118196734_118196822_118197997_118198092_118200473_118200613_118203427_118203666_118205881_118205992_118210486_118210713_118212406_118212562_118212904
transcript_28669.known	chr11	-	3983	6	FSM	ENSG00000160588.10	ENST00000278949.9	3983	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.65329983228432	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGGTGTGTGCATATC	-118252110	True	NA	1	True	AATAAA	-22	NA	118252365	118226689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118229921_118233459_118233524_118235423_118235590_118237049_118237261_118240210_118240378_118252221
transcript_2867.known	chr1	-	2726	9	FSM	ENSG00000001460.18	ENST00000337248.9	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	15.6199991997439	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGGGTACCCCTTAAT	-24412851	True	NA	-1	True	ATTAAA	-22	NA	24413782	24356998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_28670.known	chr11	-	2622	6	FSM	ENSG00000149573.9	ENST00000278937.7	2622	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.68328157299975	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTGTATATACATATCTA	-118264230	True	NA	3	True	AATAAA	-33	NA	118264297	118253415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118255234_118257237_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_28671.known	chr11	-	1370	5	FSM	ENSG00000149573.9	ENST00000438295.2	1370	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.48746859276655	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGTATCTGCTTATTCT	NA	False	NA	NA	False	AATAAA	-37	NA	118264536	118256910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118257314_118260053_118260202_118262437_118262649_118262930_118263098_118264095
transcript_28673.known	chr11	+	1361	9	FSM	ENSG00000198851.10	ENST00000361763.9	1361	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTGCTGTCCCTGTTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	118304729	118316173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118304777_118304893_118305002_118307287_118307309_118308426_118308442_118312152_118312171_118312617_118312867_118313706_118313875_118314447_118314495_118315485
transcript_28674.known	chr11	-	701	5	FSM	ENSG00000167286.10	ENST00000300692.9	701	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTGCCTGGGCTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	118342705	118339074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118339228_118339450_118339495_118339774_118339907_118340374_118340594_118342552
transcript_28675.known	chr11	-	1819	13	FSM	ENSG00000118096.10	ENST00000264020.6	1819	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	25.648261799454	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-118564998	True	NA	NA	False	AGTAAA	-17	NA	118566035	118544542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118557737_118557891_118559784_118559865_118564964_118565062_118565789
transcript_28676.known	chr11	-	1562	12	FSM	ENSG00000118096.10	ENST00000264021.8	1562	12	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_9	13.0371370380448	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTCTATTATATTGTCAGA	-118564894	True	NA	NA	False	AGTAAA	-17	NA	118565931	118544542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118545012_118545408_118545495_118545792_118545854_118551785_118551853_118552213_118552336_118554458_118554588_118554989_118555084_118555247_118555323_118556905_118557046_118559784_118559865_118564964_118565062_118565789
transcript_28679.known	chr11	+	4038	11	FSM	ENSG00000095139.15	ENST00000359415.8	4038	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	457.772214097798	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTATTGGATTATTGA	118554911	True	NA	13	True	AATAAA	-17	NA	118572423	118602928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118572551_118573619_118573784_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_2868.known	chr1	-	2544	8	FSM	ENSG00000001460.18	ENST00000003583.12	2544	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	17.7913072101208	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGCTTTTGGGTACCC	-24412794	True	NA	-7	True	ATTAAA	-16	NA	24413725	24357004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24358620_24360850_24361042_24369673_24369840_24373701_24373811_24379652_24379824_24383901_24384004_24401318_24401457_24413673
transcript_28682.known	chr11	+	3994	10	FSM	ENSG00000095139.15	ENST00000264028.5	3994	10	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_7	86.2950723168643	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATCTGTGAGAGTATTCA	118554896	True	NA	17	True	ATTAAA	-30	NA	118572408	118603033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118572551_118581245_118581510_118583178_118583359_118583808_118584015_118584479_118584645_118590340_118590507_118592708_118592857_118593589_118593699_118597706_118597912_118600624
transcript_28686.known	chr11	+	2420	9	FSM	ENSG00000149582.16	ENST00000313236.10	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.2619823677497	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACATATCTCTGCTTCAT	118530424	True	NA	15	True	AATAAA	-15	NA	118531191	118535829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_28687.known	chr11	+	1456	9	FSM	ENSG00000149582.16	ENST00000354284.8	1456	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	19.2337593829184	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTAAAAAAAAAGGAAGGAAG	118530431	True	NA	NA	False	NA	NA	NA	118531198	118546484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533419_118533552_118533856_118533888_118534028_118534130_118534265_118534356_118546118
transcript_28692.known	chr11	+	2395	8	FSM	ENSG00000149582.16	ENST00000359862.8	2395	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	18.3614503006396	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATATCTCTGCTTCATTTC	118531044	False	NA	18	True	AATAAA	-18	NA	118531087	118535832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534265_118534356_118534506
transcript_28693.known	chr11	+	2228	8	FSM	ENSG00000149582.16	ENST00000442938.6	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	22.8410657744836	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAAGATAAGTGTTATCA	118531044	False	NA	NA	False	AATAAA	-13	NA	118531087	118547280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118531235_118531774_118531872_118532149_118532462_118532916_118533208_118533856_118533888_118534028_118534130_118534268_118534356_118546118
transcript_28700.known	chr11	+	575	5	FSM	ENSG00000167283.9	ENST00000529770.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	3261.66790154976	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354384	True	NA	16	True	AATAAA	-17	NA	118401618	118409199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118403923_118403986_118405656_118405710_118406936_118407098_118408999
transcript_28709.known	chr11	+	900	4	FSM	ENSG00000167283.9	ENST00000529790.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3538.70374886373	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGTTAGAGTACTTGT	118354375	True	NA	NA	False	NA	NA	NA	118401609	118409577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118405656_118405710_118406936_118407098_118408999
transcript_28723.known	chr11	+	2572	2	FSM	ENSG00000118058.24	ENST00000529852.3	2860	2	288	0	-188	0	multi-exon	FALSE	canonical	3	17	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGTTTGTTTAATTTT	118436725	False	NA	5	True	AATAAA	-23	NA	118436743	118449995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118436945_118447624
transcript_28724.known	chr11	+	457	3	FSM	ENSG00000167283.9	ENST00000529460.1	457	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3787	16189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354398	True	NA	16	True	AATAAA	-17	NA	118401632	118409199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401729_118406936_118407098_118408999
transcript_28725.known	chr11	+	336	3	FSM	ENSG00000167283.9	ENST00000533172.5	336	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3569.5	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTTTTCTCCATCAG	118354387	True	NA	16	True	AATAAA	-17	NA	118401621	118409199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118406936_118406977_118408999
transcript_28726.known	chr11	+	2222	3	FSM	ENSG00000285827.1	ENST00000649464.1	2222	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3577.5	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	118354367	True	NA	NA	False	NA	NA	NA	118401601	118449569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118406936_118407098_118447624
transcript_28727.known	chr11	+	720	3	FSM	ENSG00000167283.9	ENST00000690793.1	2788	3	286	1782	-1	-465	multi-exon	FALSE	canonical	0	0	junction_2	3577.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATCTAGAAGTCCCC	118354397	True	NA	NA	False	GATAAA	-26	NA	118401631	118431496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118401718_118406936_118407098_118431023
transcript_28728.known	chr11	-	481	4	FSM	ENSG00000118096.10	ENST00000530185.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.6797723860694	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGACGATGATGATGAT	-118564974	True	NA	NA	False	GGGGCT	-13	NA	118566011	118556993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118557046_118559784_118559865_118564964_118565092_118565789
transcript_28731.nic	chr11	+	3016	13	NIC	ENSG00000019144.20	novel	3128	15	NA	NA	-47	0	combination_of_known_junctions	TRUE	canonical	3	58	junction_1	42.6347536901789	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGAGTGGAAGGCCGGT	118634902	False	NA	15	True	AATAAA	-15	NA	118634930	118658025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_118635164_118635392_118635549_118638890_118639002_118639161_118639252_118643799_118643941_118644071_118644175_118645355_118645651_118645734_118645826_118647929_118648077_118650076_118650194_118650444_118650548_118655604_118655691_118656682
transcript_28735.nic	chr11	+	438	2	ISM	ENSG00000019144.20	ENST00000526699.5	535	4	-41	3640	-41	-3522	5prime_fragment	FALSE	canonical	3	39	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGATGTGATTGTAAT	118634908	False	NA	NA	False	ATTAAA	-16	NA	118634936	118635715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_118635052_118635392
transcript_28736.nic	chr11	+	559	2	ISM	ENSG00000019144.20	ENST00000527500.5	483	4	-93	3519	-47	-3519	5prime_fragment	FALSE	canonical	3	58	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGTGATTGTAATGAG	118634902	False	NA	NA	False	ATTAAA	-19	NA	118634930	118635718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_118635164_118635392
transcript_28737.nnic	chr11	+	435	2	NNC	ENSG00000019144.20	novel	483	4	NA	NA	109	-3519	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATGTGATTGTAATGAG	118634944	True	NA	NA	False	ATTAAA	-19	NA	118635137	118635718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_118635247_118635392
transcript_28741.known	chr11	-	6152	14	FSM	ENSG00000110367.14	ENST00000620157.4	6152	14	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_13	141.016932132028	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATGTGTGTGTGGTATGTC	-118790857	False	25289	-4	True	AATAAA	-17	NA	118790948	118747765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_28743.nnic	chr11	-	2018	14	NNC	ENSG00000110367.14	novel	6152	14	NA	NA	-42	-545	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_13	123.137100672909	53	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTGCACTGTGTGCTG	-118790899	False	NA	-6	True	AATATA	-15	NA	118790990	118751909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_118752098_118754704_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_28747.known	chr11	-	1936	13	FSM	ENSG00000110367.14	ENST00000526070.2	1936	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	143.814768017753	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118790857	False	25289	-38	True	AATAAA	-13	NA	118790948	118754588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790854
transcript_28748.nnic	chr11	-	1946	13	NNC	ENSG00000110367.14	novel	1936	13	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	3	87	junction_12	124.361117315663	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACTAGCATAAATGACAGTA	-118790899	False	NA	-38	True	AATAAA	-13	NA	118790990	118754588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_118754888_118755401_118755504_118756259_118756324_118757170_118757288_118758773_118758903_118759921_118760045_118763211_118763307_118765208_118765356_118768222_118768353_118779631_118779737_118781120_118781185_118786051_118786519_118790886
transcript_28756.nnic	chr11	+	934	3	Antisense	novelGene_ENSG00000110367.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	18	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATTGTGCAAGTCAAG	118719633	False	NA	3	True	AATAAA	-14	NA	118719649	118754936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_118720348_118754457_118754586_118754828
transcript_28760.nnic	chr11	-	532	3	NNC	ENSG00000287238.1	novel	1286	2	NA	NA	7695	4034	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTT	-118721700	False	NA	-1	True	ATTAAA	-21	NA	118721717	118717069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_118717453_118720192_118720276_118721651
transcript_28766.nnic	chr11	+	1366	2	Antisense	novelGene_ENSG00000110367.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	38	junction_1	0	335	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAATTGTGCAAGTCAAG	118719442	False	NA	3	True	AATAAA	-14	NA	118719460	118754936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_118720348_118754457
transcript_28768.known	chr11	-	1286	2	FSM	ENSG00000287238.1	ENST00000664961.1	1286	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTCTCTGTGTCTTTTT	-118729395	False	NA	NA	False	NA	NA	NA	118729412	118721103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_118722076_118729098
transcript_28770.known	chr11	+	1884	1	FSM	ENSG00000278376.1	ENST00000610705.1	1884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGGTCGTTATTTCTA	118791198	True	NA	2	True	AGTAAA	-14	NA	118791253	118793137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118791300_118793100
transcript_28772.known	chr11	+	958	6	FSM	ENSG00000110375.3	ENST00000534788.1	958	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACATGTGTTTCCCTTT	118925152	False	NA	NA	False	AATAAA	-16	NA	118925163	118958554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118925292_118951203_118951266_118956882_118957015_118957207_118957315_118957597_118957669_118958096
transcript_28777.nnic	chr11	+	861	3	NIC	ENSG00000110375.3	novel	958	6	NA	NA	-199	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTTTCCCTTTAGTGG	118924953	False	NA	NA	False	AATAAA	-21	NA	118924964	118958559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_118925292_118957597_118957669_118958096
transcript_28792.known	chr11	+	1254	11	FSM	ENSG00000186166.9	ENST00000334418.6	1254	11	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	64.0440473424346	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTATCTACCTCCTAC	118994484	True	NA	69	True	ATTAAA	-18	NA	118998137	119015793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011284_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015306_119015440_119015537
transcript_28794.known	chr11	+	1119	11	FSM	ENSG00000186166.9	ENST00000532132.5	1119	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	74.2431141588228	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACCCCTATTATACCTTC	118994514	True	NA	-83	True	NA	NA	NA	118998167	119015641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_118998318_118998429_118998594_118999010_118999110_119010763_119010831_119011220_119011312_119011938_119012004_119012148_119012255_119013231_119013263_119014993_119015084_119015287_119015440_119015537
transcript_288.known	SIRV4	-	570	5	FSM	SIRV4A	SIRV408	570	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3090.27210573762	12755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTGATATTTAGAGCGT	NA	False	NA	NA	False	NA	NA	NA	15122	8323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8373_8629_8748_8846_8991_13672_13829_15019
transcript_28810.known	chr11	-	483	5	FSM	ENSG00000118181.11	ENST00000527673.2	483	5	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	4495.84980843444	52532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAATGAATGAGTATGTCT	-118985614	True	NA	-15	True	AATAAA	-12	NA	119018343	119015716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017957_119018054_119018281
transcript_28811.known	chr11	-	711	5	FSM	ENSG00000118181.11	ENST00000527791.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	768	junction_3	7562.95641184716	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-119018657	False	NA	-10	True	AATAAA	-17	NA	119018678	119015711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017434_119017957_119018054_119018281
transcript_28812.known	chr11	-	508	5	FSM	ENSG00000118181.11	ENST00000532567.5	508	5	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	7760.36555195694	2661	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGAGTATGTCTGTTTC	-118985601	True	NA	-10	True	AATAAA	-17	NA	119018330	119015711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361_119017546_119017924_119018054_119018281
transcript_28813.known	chr11	-	1462	3	FSM	ENSG00000118181.11	ENST00000527853.1	1462	3	0	0	0	0	multi-exon	FALSE	canonical	3	8677	junction_1	6346.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTATTAAATCAAATGAATG	-119016788	True	NA	-24	True	AATAAA	-3	NA	119018691	119015725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119015759_119015840_119015940_119017361
transcript_28825.known	chr11	+	654	3	FSM	ENSG00000196655.12	ENST00000525303.5	654	3	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	431	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAATATTCCTTTGATCT	119014241	True	NA	0	True	CATAAA	-7	NA	119018765	119023642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119021759_119021887_119023320
transcript_28826.known	chr11	+	817	4	FSM	ENSG00000196655.12	ENST00000533012.1	817	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	386.855126486504	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGTGTTTGCAATCTGT	119014270	True	NA	17	True	AATAAA	-12	NA	119018794	119023659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119019142_119019318_119021759_119021887_119023320
transcript_28827.known	chr11	-	2040	9	FSM	ENSG00000137700.18	ENST00000527992.5	2040	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	89.9277487764483	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAGAAGATTAAAACTA	-119027109	True	NA	-34	True	AAGAAA	-10	NA	119030880	119024387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027873_119028193_119028427_119029221_119029565_119030848
transcript_28828.known	chr11	+	849	5	FSM	ENSG00000196655.12	ENST00000359005.8	849	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	350.805768909236	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGTCTTAATCGATGGT	119014241	True	NA	30	True	AATAAA	-25	NA	119018765	119023672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119019142_119019318_119020149_119020254_119021873_119021887_119023320
transcript_28829.known	chr11	-	2032	11	FSM	ENSG00000137700.18	ENST00000538950.5	2032	11	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_6	146.099452428816	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	119030906	119024350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119028734_119028835_119029391_119029565_119030848
transcript_28830.known	chr11	-	2102	10	FSM	ENSG00000137700.18	ENST00000330775.9	2102	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	120.174358925729	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTGATTCATTTTTTC	NA	False	NA	3	True	ATTAAA	-22	NA	119030906	119024350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119025077_119025190_119025330_119025966_119026081_119026602_119026689_119026936_119027096_119027627_119027725_119027725_119027873_119028193_119028427_119029221_119029565_119030848
transcript_28831.known	chr11	+	794	5	FSM	ENSG00000196655.12	ENST00000434101.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	353.884161838305	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGCAATCTGTCTTAAT	119014241	True	NA	23	True	AATAAA	-18	NA	119018765	119023665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119018971_119019142_119019211_119020204_119020254_119021759_119021887_119023320
transcript_28832.known	chr11	-	4598	26	FSM	ENSG00000149428.20	ENST00000617285.5	4598	26	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_25	142.060347739966	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-119030863	True	NA	-5	True	AATAAA	-16	NA	119057205	119044187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119045655_119045780_119045832_119046416_119046468_119046561_119046803_119047733_119047819_119047946_119048081_119048247_119048371_119048475_119048564_119048713_119048887_119049017_119049204_119049555_119049636_119049776_119049838_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_28834.nnic	chr11	-	1951	15	NNC	ENSG00000149428.20	novel	4598	26	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	292.323800060195	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGTGCTGTGAGTTTT	-119030837	True	NA	-5	True	AATAAA	-16	NA	119057179	119044187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_119044307_119051034_119051174_119051437_119051626_119051818_119051952_119052089_119052173_119052294_119052430_119052636_119052830_119054120_119054237_119054493_119054676_119054983_119055061_119055184_119055340_119055492_119055572_119055749_119055844_119056069_119056168_119057019
transcript_28837.known	chr11	-	325	1	FSM	ENSG00000272186.1	ENST00000607709.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCAGATTGTGAACCATAGT	NA	False	NA	NA	False	AATAAA	-25	NA	119067698	119067373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119067400_119067700
transcript_28838.known	chr11	+	3181	16	FSM	ENSG00000160695.16	ENST00000621676.5	3181	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5416652518392	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTAAGGATTTTTTTCTGG	119066919	True	NA	19	True	AATAAA	-20	NA	119067817	119081972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119068011_119069195_119069345_119069441_119069578_119070233_119070398_119071595_119071844_119073197_119073400_119073799_119073952_119076896_119077084_119077500_119077648_119077877_119078067_119078172_119078335_119078564_119078705_119078794_119078998_119079128_119079301_119081091_119081315_119081458
transcript_2884.nic	chr1	-	1020	5	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-1	22274	-1	0	5prime_fragment	FALSE	canonical	3	45	junction_2	19.1098796437864	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCATATCAGAAAATAGGT	-24412852	True	NA	NA	False	AATAAA	-2	NA	24413783	24379272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_28844.known	chr11	+	1448	14	FSM	ENSG00000256269.11	ENST00000442944.7	1448	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	174.992138454018	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACCAATCCTACTAATAA	119081918	True	NA	-16	True	GGGGCT	-39	NA	119084882	119093512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089099_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_2885.nic	chr1	-	709	5	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-1	22585	-1	-311	5prime_fragment	FALSE	canonical	3	45	junction_2	19.1098796437864	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGGGGACATCGTATT	-24412852	True	NA	NA	False	AATAAA	-11	NA	24413783	24379583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24379824_24383901_24384004_24391560_24391680_24401318_24401457_24413673
transcript_28850.known	chr11	+	1559	14	FSM	ENSG00000256269.11	ENST00000537841.5	1559	14	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	175.09665969597	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAATCCTACTAATAAACCA	119081920	True	NA	-12	True	GGGGCT	-43	NA	119084884	119093516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_28856.known	chr11	+	1351	13	FSM	ENSG00000256269.11	ENST00000544387.5	1351	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_10	178.158227894944	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTGCGCGTGTGGAG	119081949	True	NA	20	True	AATAAA	-16	NA	119084913	119093548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_28860.known	chr11	+	1469	13	FSM	ENSG00000256269.11	ENST00000542729.5	1469	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	237.88033873264	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTGTGCGCGTGTGG	119081920	True	NA	18	True	AATAAA	-14	NA	119084884	119093546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085158_119088254_119088309_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092124_119092164_119092757_119092812_119092934_119093022_119093109
transcript_28876.known	chr11	+	1347	12	FSM	ENSG00000256269.11	ENST00000543090.5	1347	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	245.702467385533	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTCTGAAGGTGTTGTG	119081965	True	NA	5	True	AATAAA	-1	NA	119084929	119093533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119085067_119088634_119088708_119089081_119089132_119089216_119089273_119089682_119089761_119089989_119090068_119090189_119090266_119091412_119091527_119092403_119092524_119092757_119092812_119092934_119093022_119093109
transcript_28877.known	chr11	-	1373	2	FSM	ENSG00000188486.4	ENST00000375167.1	1373	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAATGGAGCGTTTGTTTT	-119082312	True	NA	-28	True	ATTAAA	-15	NA	119095449	119093878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119094262_119094459
transcript_28878.known	chr11	-	1614	1	FSM	ENSG00000188486.4	ENST00000530167.2	1592	1	-2	-20	-2	20	mono-exon	FALSE	NA	NA	NA	NA	NA	68	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAAGAGAGTTGTAGAATT	-119082330	True	NA	-3	True	ATTAAA	-40	NA	119095467	119093853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119093900_119095500
transcript_28881.known	chr11	-	1788	9	FSM	ENSG00000172269.20	ENST00000683143.1	1788	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	151.950187150263	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096464	True	NA	-24	True	AATAAA	-5	NA	119101832	119096522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101048_119101494
transcript_28887.known	chr11	-	1817	8	FSM	ENSG00000172269.20	ENST00000392834.7	1817	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	160.141773922678	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGTAGGTATATTT	-119096510	True	NA	-11	True	AATAAA	-18	NA	119101878	119096509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100844_119101494
transcript_28888.known	chr11	-	1791	8	FSM	ENSG00000172269.20	ENST00000682791.1	1791	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	162.19539740318	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096463	True	NA	-24	True	AATAAA	-5	NA	119101831	119096522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119098044_119098402_119098488_119100261_119100409_119100629_119100878_119101494
transcript_28896.known	chr11	-	1689	8	FSM	ENSG00000172269.20	ENST00000682946.1	1689	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	152.442829698647	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096463	True	NA	-24	True	AATAAA	-5	NA	119101831	119096522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_28897.known	chr11	-	1760	9	FSM	ENSG00000172269.20	ENST00000682811.1	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	146.445755742527	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTTTCTTATTGTTTA	-119096463	True	NA	-24	True	AATAAA	-5	NA	119101831	119096522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119097064_119097141_119097298_119097463_119097552_119097854_119097926_119098402_119098488_119100261_119100409_119100629_119100844_119101017_119101139_119101494
transcript_2890.nnic	chr1	-	488	4	NNC	ENSG00000001460.18	novel	455	2	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	6.37704215656966	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGTTAGTTCCAT	-24412840	True	NA	-18	True	AATAAA	-17	NA	24413771	24401078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_24401216_24401318_24401457_24410702_24410818_24413673
transcript_28903.nnic	chr11	+	2299	11	NNC	ENSG00000172273.13	novel	3185	10	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	58.2945108908206	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	119118557	True	NA	28	True	AATAAA	-19	NA	119121577	119135054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119121640_119123567_119123685_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_28906.known	chr11	+	3185	10	FSM	ENSG00000172273.13	ENST00000350777.7	3185	10	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	23.0929415756695	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGTCTATTTGTGG	119118559	True	NA	NA	False	AATAAA	-28	NA	119121579	119136059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_28909.nic	chr11	+	1608	9	ISM	ENSG00000172273.13	ENST00000527410.3	1466	10	-51	711	-15	-295	5prime_fragment	FALSE	canonical	3	111	junction_1	22.5055548698538	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTAATTTGATGGTGGTT	119118544	True	NA	NA	False	AATAAA	-17	NA	119121564	119133603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_119121640_119126934_119127126_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094
transcript_2891.known	chr1	+	694	3	FSM	ENSG00000001461.17	ENST00000475663.2	694	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	43	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGAAGATTGACTCTGACAT	24414846	True	NA	NA	False	NA	NA	NA	24415857	24422110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290_24419641_24421813
transcript_28912.nic	chr11	+	1989	9	NIC	ENSG00000172273.13	novel	3185	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	52.3197799593997	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTATTTCTTCTTACATTT	119118559	True	NA	28	True	AATAAA	-19	NA	119121579	119135054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_119121640_119130724_119130955_119131534_119131647_119131829_119131983_119132495_119132574_119132660_119132782_119132863_119133003_119133094_119133220_119134083
transcript_28924.known	chr11	+	573	2	FSM	ENSG00000172273.13	ENST00000527206.1	573	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGTTGTTGTGTTTTT	119118570	True	NA	NA	False	NA	NA	NA	119121590	119127458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119121640_119126934
transcript_28927.nnic	chr11	-	679	6	NIC	ENSG00000248712.8	novel	1173	8	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	8.95767827062348	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGAGCTGTGGGCTCTGG	NA	False	NA	-35	True	AATAAA	-20	NA	119195864	119190255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_119190453_119190709_119190841_119193150_119193244_119193765_119193886_119194922_119194995_119195798
transcript_2893.nic	chr1	-	946	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-1	33983	-1	221	5prime_fragment	FALSE	canonical	3	46	junction_1	23	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAGTACAAAAATTAGC	-24412852	True	NA	NA	False	AAGAAA	-13	NA	24413783	24390981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24391680_24401318_24401457_24413673
transcript_28933.known	chr11	-	3327	16	FSM	ENSG00000076706.17	ENST00000264036.6	3327	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_15	5.11033810579648	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACATTGCTTTTTATTC	-119316224	True	NA	-4	True	AATAAA	-19	NA	119317130	119308528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119309916_119310348_119310467_119310755_119310904_119311089_119311186_119311279_119311422_119311529_119311652_119311807_119311950_119312051_119312171_119312265_119312429_119312526_119312649_119312769_119312950_119314488_119314577_119314678_119314750_119314832_119315041_119315138_119315264_119317034
transcript_28934.known	chr11	+	2783	1	FSM	ENSG00000173456.5	ENST00000311413.5	2783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	186	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGTCTCTGTGTGCATC	119324405	True	NA	14	True	AATAAA	-17	NA	119334526	119337309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119334500_119337300
transcript_28935.nnic	chr11	+	773	6	Fusion	ENSG00000245248.8_ENSG00000254561.4	novel	2525	4	NA	NA	-9	-22190	multi-exon	TRUE	canonical	0	0	junction_3	12.8467894822014	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCAGTCTCAGGTAT	119381414	True	NA	2	True	AATAAA	-16	NA	119381761	119637055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_119381909_119394980_119395155_119469808_119469976_119531923_119531970_119543523_119543632_119636924
transcript_28937.nnic	chr11	+	727	5	Fusion	ENSG00000245248.8_ENSG00000254561.4	novel	2525	4	NA	NA	-9	-22190	multi-exon	FALSE	canonical	0	0	junction_4	13.1600721882519	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCAGTCTCAGGTAT	119381414	True	NA	2	True	AATAAA	-16	NA	119381761	119637055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_119381909_119394980_119395155_119469808_119469976_119543523_119543632_119636924
transcript_2894.nic	chr1	-	725	3	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-1	34204	-1	0	5prime_fragment	FALSE	canonical	3	46	junction_1	23	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTGAGAGGAAATCAC	-24412852	True	NA	NA	False	ATTAAA	-16	NA	24413783	24391202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24391680_24401318_24401457_24413673
transcript_28940.known	chr11	+	1012	4	FSM	ENSG00000245248.8	ENST00000656292.1	1012	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1730755689881	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGACTGGATCAGGGATT	119381459	True	NA	NA	False	AATAAA	-13	NA	119381806	119413108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119381909_119394980_119395155_119410677_119410776_119412470
transcript_28941.known	chr11	+	2525	4	FSM	ENSG00000245248.8	ENST00000498979.7	2525	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.1656862405839	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCCAATAAACCTCTTTGT	119381423	True	NA	NA	False	NA	NA	NA	119381770	119500595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119381909_119394980_119395155_119469808_119469976_119498549
transcript_28942.nnic	chr11	+	560	4	Fusion	ENSG00000245248.8_ENSG00000254561.4	novel	2525	4	NA	NA	-9	-22190	multi-exon	FALSE	canonical	0	0	junction_2	16.0277537068951	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGCCCAGTCTCAGGTAT	119381414	True	NA	2	True	AATAAA	-16	NA	119381761	119637055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_119381909_119394980_119395155_119543523_119543632_119636924
transcript_28947.known	chr11	+	3844	3	FSM	ENSG00000245248.8	ENST00000660630.1	3844	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	12	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCATGGAGTGTGCACCTA	119381462	True	NA	NA	False	NA	NA	NA	119381809	119413071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119381909_119394980_119395155_119409500
transcript_28949.nnic	chr11	+	553	3	NNC	ENSG00000245248.8	novel	1478	3	NA	NA	-9	2803	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGTTTGTTTGTTTCAC	119381414	True	NA	NA	False	AGTAAA	-20	NA	119381761	119415911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119381909_119394980_119395155_119415679
transcript_2895.nnic	chr1	-	385	3	NNC	ENSG00000001460.18	novel	455	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	2	18	junction_1	37	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGTTAGTTCCAT	-24412852	True	NA	-18	True	AATAAA	-17	NA	24413783	24401078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_24401216_24401318_24401457_24413673
transcript_28950.nic	chr11	+	594	3	ISM	ENSG00000245248.8	ENST00000530002.1	764	4	-73	5627	-9	-5627	5prime_fragment	FALSE	canonical	3	11	junction_2	11.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCATCATAGTCCTTAC	119381414	True	NA	NA	False	AGTAAA	-17	NA	119381761	119470081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_119381909_119394980_119395155_119469808
transcript_28955.known	chr11	-	581	4	FSM	ENSG00000154096.14	ENST00000524970.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_1	1133.10615370121	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAGAAGTGGGGACCCCA	-119366155	True	NA	NA	False	NA	NA	NA	119423172	119419307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119419432_119420050_119420387_119420868_119420930_119423112
transcript_28957.known	chr11	-	897	4	FSM	ENSG00000154096.14	ENST00000528295.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	1117.70598399877	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAGTGGGATGGTGGGGTA	-119366155	True	NA	NA	False	NA	NA	NA	119423172	119419072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119419521_119420050_119420379_119420868_119420930_119423112
transcript_28958.known	chr11	-	602	4	FSM	ENSG00000154096.14	ENST00000532974.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	1130.89974012828	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGCTCCTGCTCTCCCT	-119366182	True	NA	NA	False	NA	NA	NA	119423199	119419464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119419521_119420050_119420449_119420868_119420930_119423112
transcript_28963.known	chr11	-	578	4	FSM	ENSG00000154096.14	ENST00000580275.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_2	1113.93636363224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCAGTGCAGAGATCC	-119366181	True	NA	NA	False	NA	NA	NA	119423198	119419374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119419521_119420050_119420336_119420868_119420930_119423112
transcript_28968.known	chr11	-	2427	1	FSM	ENSG00000154096.14	ENST00000584021.1	2427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAAGGGCA	-119421218	False	NA	-32	True	NA	NA	NA	119421246	119418819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119418800_119421200
transcript_28969.known	chr11	+	632	2	FSM	ENSG00000263873.1	ENST00000578216.1	632	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTCTTCACGAACTCTCA	NA	False	NA	NA	False	NA	NA	NA	119417950	119419114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119418135_119418666
transcript_2897.known	chr1	+	931	2	FSM	ENSG00000001461.17	ENST00000488155.1	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAGGCAGAGAAACACC	24414800	True	NA	NA	False	ATTAAA	-12	NA	24415811	24420128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24415905_24419290
transcript_28970.known	chr11	-	2050	4	FSM	ENSG00000154096.14	ENST00000528522.5	2050	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1160.83715002962	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAATAAAAAGGGCA	-119422534	False	NA	-32	True	NA	NA	NA	119422562	119418819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119419521_119420050_119420387_119420868_119420930_119421610
transcript_28971.nic	chr11	-	693	4	ISM	ENSG00000110400.11	ENST00000340882.2	1059	6	50842	-210	-110	0	3prime_fragment	FALSE	canonical	3	26	junction_1	36.2338086445365	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATCATCATCATTATTA	-119677694	False	NA	2	True	AATAAA	-31	NA	119677711	119674381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_119674648_119675158_119675311_119677101_119677220_119677554
transcript_28972.known	chr11	-	452	2	FSM	ENSG00000110400.11	ENST00000532197.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGATTCAGTCTGAG	-119677584	False	NA	-2	True	AATAAA	-17	NA	119677601	119676814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_119677220_119677554
transcript_28974.nnic	chr11	+	1198	5	NNC	ENSG00000254854.1	novel	523	4	NA	NA	-71	7081	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.1234753829798	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGTATTATCGTGTA	119729489	False	NA	NA	False	CATAAA	-5	NA	119729511	119746704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119729854_119733656_119733751_119736806_119736919_119739530_119739789_119746312
transcript_28978.nnic	chr11	+	1130	5	NNC	ENSG00000254854.1	novel	523	4	NA	NA	-50	7081	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	4.26468052730799	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGTATTATCGTGTA	119729426	True	NA	NA	False	CATAAA	-5	NA	119729532	119746704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119729807_119733656_119733751_119736806_119736919_119739530_119739789_119746312
transcript_2898.nnic	chr1	+	575	2	NNC	ENSG00000001461.17	novel	931	2	NA	NA	-9	-3641	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGCTGTCTCATTTGTAAAA	24414781	True	NA	NA	False	AATACA	-15	NA	24415792	24416487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_24415905_24416024
transcript_28981.known	chr11	+	523	4	FSM	ENSG00000254854.1	ENST00000533253.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.24264068711928	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCTAGTGGGAGCCTCC	119729476	True	NA	NA	False	NA	NA	NA	119729582	119739623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_119729807_119733656_119733751_119736806_119736919_119739530
transcript_28988.nnic	chr11	+	717	3	NNC	ENSG00000254854.1	novel	523	4	NA	NA	-50	-2961	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGGTGAAGAGTTTTT	119729426	True	NA	NA	False	TATAAA	-39	NA	119729532	119736662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_119729807_119733656_119733751_119736313
transcript_2899.nic	chr1	+	528	2	ISM	ENSG00000001461.17	ENST00000003912.7	5481	13	48075	3706	7712	2892	3prime_fragment	FALSE	canonical	3	50	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTCTAACTGAGAAC	24463595	True	NA	24	True	NA	NA	NA	24463877	24469270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24464121_24468985
transcript_28992.known	chr11	+	1034	2	FSM	ENSG00000137709.10	ENST00000529039.1	1034	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGGAAGAACACAAGAGCAAA	120317139	True	NA	NA	False	NA	NA	NA	120317165	120319187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120317365_120318352
transcript_28993.nic	chr11	+	795	5	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-16	-184	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	16.1148223694833	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	120324194	True	NA	5	True	AATAAA	-13	NA	120325279	120330634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120327121_120327327_120327440_120327641_120329976_120330050_120330406
transcript_28995.nic	chr11	+	700	4	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-126	-184	combination_of_known_junctions	FALSE	canonical	3	21	junction_3	10.2089285540757	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	120325149	True	NA	5	True	AATAAA	-13	NA	120325169	120330634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120327440_120327641_120329976_120330050_120330406
transcript_28997.known	chr11	+	3930	4	FSM	ENSG00000181264.9	ENST00000529187.1	3930	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	13.4742552876052	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGAGTCTGTCTTTATAT	120324221	True	NA	NA	False	AGTAAA	-16	NA	120325306	120333682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120327121_120327641_120329976_120330050_120330406
transcript_28998.nnic	chr11	+	552	4	NNC	ENSG00000181264.9	novel	3930	4	NA	NA	-3	-184	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	15.2534149181967	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	120324207	True	NA	5	True	AATAAA	-13	NA	120325292	120330634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_120325369_120327465_120327641_120329976_120330050_120330406
transcript_28999.known	chr11	+	3980	3	FSM	ENSG00000181264.9	ENST00000375095.3	3980	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCTGTCTTTATATTTAT	120324213	True	NA	NA	False	AGTAAA	-20	NA	120325298	120333686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120327440_120327641_120329976
transcript_29.known	ERCC-00067	+	628	1	FSM	ERCC-00067A	DQ883653	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00067_+_0_600
transcript_2900.nic	chr1	+	589	2	ISM	ENSG00000001461.17	ENST00000003912.7	5481	13	48075	3645	7712	2953	3prime_fragment	FALSE	canonical	3	50	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGCGTTATCTTGGTCTT	24463595	True	NA	4	True	AAAAAG	-18	NA	24463877	24469331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24464121_24468985
transcript_29000.nic	chr11	+	391	3	NIC	ENSG00000181264.9	novel	3930	4	NA	NA	-17	-184	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	7	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	120324193	True	NA	5	True	AATAAA	-13	NA	120325278	120330634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_120325369_120329976_120330050_120330406
transcript_29001.known	chr11	+	1434	3	FSM	ENSG00000181264.9	ENST00000314475.6	1434	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGATGTTCAGGCAGTT	120324210	True	NA	NA	False	NA	NA	NA	120325295	120330818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120327121_120327641_120329976
transcript_29002.nnic	chr11	+	909	3	NNC	ENSG00000181264.9	novel	1434	3	NA	NA	-3	-184	intron_retention	FALSE	canonical	3	7	junction_1	18.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATCAATTTGGTCAGTCT	120324207	True	NA	5	True	AATAAA	-13	NA	120325292	120330634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_120325369_120327465_120327641_120329976
transcript_29003.known	chr11	+	3776	2	FSM	ENSG00000181264.9	ENST00000531346.1	3776	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACCCAGAGTCTGTCTTTA	120324210	True	NA	NA	False	AGTAAA	-13	NA	120325295	120333679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_120325369_120329976
transcript_29006.nnic	chr11	-	954	3	Antisense	novelGene_ENSG00000109927.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_2	1.5	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTGTACTTTCTTCA	NA	False	NA	-10	True	AATAAA	-18	NA	121198714	121187473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_121187985_121193670_121193929_121198529
transcript_2901.nic	chr1	+	533	2	ISM	ENSG00000001461.17	ENST00000339255.2	1676	12	48081	0	7729	0	3prime_fragment	FALSE	canonical	3	39	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AATAAATAAATAAATAAAAG	24463612	True	NA	-22	True	ATTAAA	-1	NA	24463894	24466310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24464121_24466003
transcript_29011.known	chr11	+	6854	5	FSM	ENSG00000109929.10	ENST00000264027.9	6854	5	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	94.2745326161843	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGTGTGGCTATATGT	121292492	False	NA	20	True	AATAAA	-25	NA	121292770	121313410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_29017.known	chr11	+	767	4	FSM	ENSG00000109929.10	ENST00000531140.1	767	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	108.751500628216	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGGAGGATGGGAGAGG	121292480	False	NA	NA	False	AATAGA	-17	NA	121292758	121306741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365_121303586_121304360_121304494_121306385
transcript_2902.nic	chr1	-	488	2	ISM	ENSG00000001460.18	ENST00000337248.9	2726	9	-1	44080	-1	0	5prime_fragment	FALSE	canonical	3	92	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGACTTGTTAGTTCCAT	-24412852	True	NA	-18	True	AATAAA	-17	NA	24413783	24401078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_24401457_24413673
transcript_29020.known	chr11	+	921	3	FSM	ENSG00000109929.10	ENST00000534455.5	921	3	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	132.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACAAATGAAGTCCTGAGG	NA	False	NA	NA	False	NA	NA	NA	121292680	121304925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121292817_121303365_121303586_121304360
transcript_29021.known	chr11	+	2258	5	FSM	ENSG00000109929.10	ENST00000392789.2	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	292.566659071057	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATCAGTTGAGTATTAT	121289797	False	NA	NA	False	AATAAA	-18	NA	121292851	121308633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_121293079_121303365_121303586_121304360_121304494_121306385_121306487_121307056
transcript_2903.known	chr1	+	2421	5	FSM	ENSG00000117602.13	ENST00000538532.6	2421	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	34.1357583773966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATACCCCTAATTTTTTT	24502086	True	NA	NA	False	NA	NA	NA	24502350	24536800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24502464_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_29030.nnic	chr11	+	812	4	Antisense	novelGene_ENSG00000255248.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	3.29983164553722	34	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	122524600	True	NA	19	True	ATTAAA	-21	NA	122524701	122555566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_122524847_122547015_122547174_122549399_122549483_122555140
transcript_29032.known	chr11	-	3666	3	FSM	ENSG00000255248.10	ENST00000530072.7	3673	3	0	7	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGAATTTGTGTTGATTT	-122101673	True	NA	NA	False	AATAAA	-17	NA	122101687	122089109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_122091741_122100373_122101168_122101446
transcript_29034.known	chr11	+	6865	14	FSM	ENSG00000154127.10	ENST00000284273.6	6865	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.46965810296344	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAGAGCAATGTCATTTTA	122655095	True	NA	NA	False	AATAAA	-19	NA	122655721	122814473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_122656211_122776218_122776273_122777023_122777211_122779496_122779696_122783052_122783223_122789099_122789309_122794701_122794835_122796155_122796277_122796910_122797034_122798941_122799035_122801187_122801333_122806409_122806517_122808066_122808177_122809748
transcript_29046.known	chr11	-	2264	9	FSM	ENSG00000109971.14	ENST00000534624.6	2264	9	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	1844.61188329686	17470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTTGAGTCTTTAAATA	-123007290	True	NA	NA	False	AATAAA	-26	NA	123062136	123057488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119_123061330_123062063
transcript_29047.known	chr11	-	2186	8	FSM	ENSG00000109971.14	ENST00000227378.7	2186	8	0	0	0	0	multi-exon	FALSE	canonical	3	7852	junction_5	1931.47485151653	4859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACAATTGCTTTGAGTC	-123061321	False	NA	NA	False	AATAAA	-18	NA	123061332	123057496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123057920_123058251_123058485_123058631_123058831_123059058_123059262_123059472_123060029_123060115_123060269_123060592_123060799_123061119
transcript_29048.known	chr11	+	724	3	FSM	ENSG00000288061.2	ENST00000660892.2	731	3	0	7	0	-7	multi-exon	FALSE	canonical	0	0	junction_2	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTACATTTGCACCTAG	123062398	True	NA	NA	False	AATAAA	-10	NA	123062654	123084870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_123062698_123063330_123063514_123084372
transcript_29050.known	chr11	+	1180	2	FSM	ENSG00000023171.20	ENST00000533341.3	1180	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAAATTCTTTTATT	123429665	True	NA	11	True	AATAAA	-23	NA	123430268	123435715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_123431167_123435433
transcript_29053.known	chr11	-	3384	7	FSM	ENSG00000166261.11	ENST00000529691.1	3384	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	46.5259784063341	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTGTTTGCTTTTTC	-123737801	True	NA	-1	True	AGTAAA	-14	NA	123741671	123724779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123726992_123727475_123727596_123728132_123728263_123729125_123729215_123729614_123729826_123730486_123730986_123741548
transcript_29058.known	chr11	-	640	4	FSM	ENSG00000166261.11	ENST00000525391.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	43.099368389288	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGATTGGCATTGACTA	-123737795	True	NA	-16	True	ATTAAA	-17	NA	123741665	123738623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_123738911_123740116_123740233_123740416_123740537_123741548
transcript_29059.known	chr11	+	4300	19	FSM	ENSG00000110002.16	ENST00000456829.7	4300	19	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	52.4836541279024	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGATAGGCCCTACCTATG	124113148	True	NA	NA	False	AGTAAA	-45	NA	124115449	124147721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_29060.known	chr11	+	3419	18	FSM	ENSG00000110002.16	ENST00000392748.5	3419	18	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_12	44.2911880915443	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGCAGTGGTTCTTAAAG	124113102	True	NA	NA	False	ATTAAA	-27	NA	124115403	124146909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236_124124317_124134919_124135035_124136128_124136294_124136573_124136675_124137014_124137269_124141597_124141742_124142441_124142573_124145236_124145364_124145865
transcript_29063.known	chr11	+	1978	11	FSM	ENSG00000110002.16	ENST00000449321.5	1978	11	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	58.1498925192472	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113102	True	NA	18	True	AATAAA	-20	NA	124115403	124124841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124116565_124116681_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_29064.known	chr11	+	1863	10	FSM	ENSG00000110002.16	ENST00000361352.9	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	29.3917767957277	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTCTGTGTATATTATT	124113102	True	NA	18	True	AATAAA	-20	NA	124115403	124124841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124115483_124117496_124117555_124117672_124117876_124118188_124118412_124118532_124118709_124118974_124119090_124122959_124123130_124123365_124123455_124123659_124123805_124124236
transcript_29067.known	chr11	+	5144	9	FSM	ENSG00000154144.13	ENST00000441174.8	5144	9	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	44.1580966528223	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTATCATCTGCATTT	124620260	True	NA	NA	False	AATAAA	-23	NA	124622863	124635926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626472_124626610_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_29074.known	chr11	+	1634	8	FSM	ENSG00000154144.13	ENST00000473629.6	1634	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	59.2607520598066	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTCTGTTTACTTTCATC	NA	False	NA	8	True	AATAAA	-11	NA	124622835	124632434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626812_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_29075.known	chr11	+	1571	8	FSM	ENSG00000154144.13	ENST00000530731.5	1571	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	68.6395494966425	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTAATCGGGATGTAAT	124620257	True	NA	26	True	AATAAA	-29	NA	124622860	124632452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631239_124631418_124632092
transcript_29076.known	chr11	+	4468	8	FSM	ENSG00000154144.13	ENST00000284290.8	4468	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	41.6065144035922	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCTGTTTGGAGCTAC	124620271	True	NA	21	True	AATAAA	-22	NA	124622874	124635398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124625670_124625904_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_29078.known	chr11	+	2142	7	FSM	ENSG00000154144.13	ENST00000529543.5	2142	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	67.8986172335065	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAAAGGACCCAGAAGTA	124620390	False	NA	NA	False	NA	NA	NA	124622993	124633424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124623234_124624930_124625002_124626903_124627051_124630387_124630486_124630744_124630856_124631274_124631418_124632092
transcript_29082.known	chr11	+	3604	5	FSM	ENSG00000064199.7	ENST00000227135.7	3604	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	9.83298021964857	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCACTTCCACTGACATC	124673361	True	NA	NA	False	NA	NA	NA	124673903	124697518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124673953_124675237_124675419_124681388_124681460_124691695_124691783_124694302
transcript_29089.nic	chr11	+	707	3	ISM	ENSG00000154144.13	ENST00000452080.5	730	5	-92	1056	-29	-1056	5prime_fragment	FALSE	canonical	3	159	junction_1	3	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAAAGAGAACAACAAACTG	NA	False	NA	25	True	AAAAAG	-7	NA	124622806	124625879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_124623234_124624930_124625002_124625670
transcript_2909.known	chr1	+	6863	5	FSM	ENSG00000117602.13	ENST00000374395.9	6863	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	10.7354552767919	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCATTGAGTTGAGTTTTT	24502571	False	NA	8	True	AATAAA	-23	NA	24502835	24541040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24503151_24514313_24514568_24531217_24531392_24533082_24533255_24535092
transcript_29091.known	chr11	-	2272	3	FSM	ENSG00000110013.13	ENST00000436137.2	2272	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTCTGTTTATTCCTTTTG	NA	False	NA	NA	False	ATTAAA	-17	NA	124673821	124658873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124660804_124669359_124669522_124673641
transcript_29092.nic	chr11	+	494	2	ISM	ENSG00000154144.13	ENST00000452080.5	730	5	-92	1938	-29	-1938	5prime_fragment	FALSE	canonical	3	159	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGTGAGCTGGCTTCATT	NA	False	NA	NA	False	AAGAAA	-1	NA	124622806	124624997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_124623234_124624930
transcript_29094.known	chr11	+	434	3	FSM	ENSG00000064199.7	ENST00000529498.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTCTTTAAATAAACTG	124673367	True	NA	NA	False	AAAAAG	-6	NA	124673909	124675875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124673953_124675237_124675419_124675665
transcript_29099.known	chr11	-	1163	7	FSM	ENSG00000019102.12	ENST00000326621.10	1163	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.59861050777091	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTCTCCTTCTTCTTTC	-124752222	True	NA	-5	True	ATTAAA	-15	NA	124752255	124747473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124747668_124748389_124748535_124748643_124748764_124749707_124749867_124750713_124750922_124751422_124751581_124752076
transcript_29104.nnic	chr11	+	389	3	FSM	ENSG00000250073.4	ENST00000686851.1	385	3	-9	5	-9	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATAAGCTCTCTAGTTA	NA	False	NA	NA	False	AATAAA	-13	NA	124762388	124765361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124762476_124764728_124764781_124765111
transcript_29107.known	chr11	-	2528	4	FSM	ENSG00000120458.13	ENST00000674284.1	2528	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	26.9485105752103	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGGCGTACTAGTTGAGC	NA	False	NA	NA	False	ATTAAA	-14	NA	124800706	124766497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124768029_124772993_124773055_124774718_124774819_124799870
transcript_29109.known	chr11	+	2139	12	FSM	ENSG00000154134.15	ENST00000525448.5	2139	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	41.094126985827	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124876455	False	NA	14	True	AATAAA	-16	NA	124876485	124881466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877753_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_29111.nic	chr11	+	1856	11	NIC	ENSG00000154134.15	novel	2139	12	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_4	38.0958002934707	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124876449	False	NA	14	True	AATAAA	-16	NA	124876479	124881466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_124876933_124877160_124877185_124877266_124877310_124877518_124877659_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_29114.known	chr11	+	1645	11	FSM	ENSG00000154134.15	ENST00000525482.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	45.501758207788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCAGGGCCCTGTCTGTC	124875978	True	NA	13	True	AATAAA	-15	NA	124876841	124881465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124876933_124877160_124877185_124877518_124877659_124877936_124878132_124878297_124878437_124878583_124878797_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_2912.known	chr1	-	244	3	FSM	ENSG00000286061.1	ENST00000652371.1	244	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGTAAAGAAATATTCTTG	-24502360	False	NA	NA	False	NA	NA	NA	24502382	24496421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_24496597_24499652_24499712_24502372
transcript_29131.nnic	chr11	+	963	6	NIC	ENSG00000154134.15	novel	2272	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	45.5938592356471	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCAGGGCCCTGTCTGTCT	124875950	True	NA	14	True	AATAAA	-16	NA	124876813	124881466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_124876933_124879189_124879342_124879464_124879576_124879786_124879949_124880417_124880609_124881238
transcript_29133.known	chr11	-	2052	3	FSM	ENSG00000285825.2	ENST00000655771.1	2052	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATCTGAGCCTAGTTATAA	-124953735	True	NA	NA	False	AATAAA	-4	NA	124953966	124949204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_124950560_124951338_124951551_124953481
transcript_29134.known	chr11	+	3812	16	FSM	ENSG00000149548.15	ENST00000344762.6	3812	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	4.80925034583238	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTATTTCCTTGCAGTT	124953863	True	NA	NA	False	AATAAA	-22	NA	124954201	125041489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_124954371_124954723_124954910_124959114_124959265_124959814_124960004_124975095_124975210_124977477_124977601_124986741_124986889_124987126_124988135_124991460_124991584_124992579_124992688_124993168_124993244_125003866_125003960_125005108_125005213_125038430_125038605_125038920_125039070_125040589
transcript_29139.known	chr11	-	848	7	FSM	ENSG00000150433.10	ENST00000529583.5	848	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	40.7079708274545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTCCATCACTAAGACAAAT	-125110337	True	NA	NA	False	NA	NA	NA	125111604	125097485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110490_125110550_125110643_125110747_125111538
transcript_2914.nnic	chr1	+	373	4	NNC	ENSG00000184454.7	novel	3980	4	NA	NA	8	-7853	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	2.35702260395516	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATATGTTATCACCTTA	24556025	True	NA	NA	False	AATAAA	-31	NA	24556094	24601475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_24556170_24595423_24595513_24600939_24601025_24601351
transcript_29141.known	chr11	-	972	7	FSM	ENSG00000150433.10	ENST00000526175.5	972	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	40.8765077873452	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATCTGCTTAGAGTGG	-125110349	True	NA	NA	False	NA	NA	NA	125111616	125097325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110490_125110550_125110643_125110747_125111586
transcript_2915.nnic	chr1	+	653	2	NNC	ENSG00000184454.7	novel	3980	4	NA	NA	11	-52301	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGATAACTCATAAAGTGT	24556028	True	NA	NA	False	ATTAAA	-1	NA	24556097	24557027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_24556170_24556446
transcript_29153.nic	chr11	-	1216	6	NIC	ENSG00000150433.10	novel	848	7	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_5	38.8381255984374	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110357	True	NA	-21	True	AATAAA	-17	NA	125111624	125097034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110490_125110550_125111538
transcript_29155.known	chr11	-	706	6	FSM	ENSG00000150433.10	ENST00000527271.5	706	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	43.7968035363313	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTTTTGACAGCCCTC	-125110346	True	NA	NA	False	NA	NA	NA	125111613	125097529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125110643_125110747_125111586
transcript_29174.nic	chr11	-	1233	5	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	17	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	37.043049280533	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110479	True	NA	-21	True	AATAAA	-17	NA	125111746	125097034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111584
transcript_29175.nic	chr11	-	1298	5	NIC	ENSG00000150433.10	novel	706	6	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_4	38.4382621875651	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	NA	False	NA	-21	True	AATAAA	-17	NA	125111813	125097034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125102131_125102318_125102733_125102810_125111586
transcript_2918.nic	chr1	+	3856	18	NIC	ENSG00000133226.18	novel	3110	18	NA	NA	-68	-19	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	391.491248847117	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGCCACTCTTAC	24615447	True	NA	4	True	AATAAA	-12	NA	24643203	24673262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24663182_24663225_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_29181.known	chr11	-	773	5	FSM	ENSG00000150433.10	ENST00000531851.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	44.6395284473302	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTTCTGGTTCTTTTTGAT	-125110322	True	NA	NA	False	AAAAAG	-7	NA	125111589	125097256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125097741_125101200_125101304_125102733_125102810_125110490_125110550_125111538
transcript_2920.known	chr1	+	3735	17	FSM	ENSG00000133226.18	ENST00000323848.14	3735	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	427.34953035396	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGTAGTGCTTATGTAAA	24615545	True	NA	23	True	AATAAA	-31	NA	24643301	24673281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433_24652629_24652912_24653033_24654854_24655130_24660718_24660800_24661309_24661397_24662659_24662805_24666814_24666926_24669122_24669588_24670119_24670316_24671385_24671596_24672181
transcript_29200.nnic	chr11	-	897	3	NIC	ENSG00000150433.10	novel	3805	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	59	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGGCTGACTTTCACTTC	-125110359	True	NA	-21	True	AATAAA	-17	NA	125111626	125097034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125097741_125101200_125101304_125111538
transcript_29206.nic	chr11	-	1749	10	NIC	ENSG00000149557.14	novel	4583	10	NA	NA	95	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_9	71.6701980180787	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCTTCATGTGCTTTGG	-125492525	False	NA	-9	True	AATAAA	-16	NA	125495570	125445752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_125446112_125448501_125448568_125452333_125452410_125454129_125454211_125455834_125456107_125460497_125460667_125463483_125463571_125481533_125481634_125489466_125489823_125495387
transcript_29214.known	chr11	-	543	3	FSM	ENSG00000149557.14	ENST00000526507.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	130.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCTTTGGAGTGTGAT	NA	False	NA	-1	True	AATAAA	-24	NA	125451520	125445744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125446112_125448501_125448568_125451410
transcript_29215.known	chr11	-	750	2	FSM	ENSG00000149557.14	ENST00000524435.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGCGGAGCAGTGCCC	-125492620	False	NA	NA	False	NA	NA	NA	125495665	125489350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125489823_125495387
transcript_29216.known	chr11	-	569	2	FSM	ENSG00000149557.14	ENST00000527534.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACCGAGAACCTAGCTCC	-125493077	False	NA	NA	False	AATGAA	-43	NA	125496122	125489540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125489823_125495835
transcript_29219.known	chr11	+	2191	11	FSM	ENSG00000149547.15	ENST00000278903.11	2191	11	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_9	95.5403579645796	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAATGGTTGAATTTG	125554718	True	NA	17	True	ATTAAA	-22	NA	125569476	125584684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_29220.known	chr11	+	1625	10	FSM	ENSG00000149547.15	ENST00000527235.6	1625	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	433.536391170494	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	125554730	True	NA	NA	False	NA	NA	NA	125569488	125584242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569574_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125582345_125582421_125583520
transcript_29221.known	chr11	+	1718	11	FSM	ENSG00000149547.15	ENST00000620753.4	1718	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	417.45447656002	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCCTGAAGA	125554699	True	NA	NA	False	NA	NA	NA	125569457	125584251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125569515_125572457_125572570_125575262_125575409_125576254_125576316_125577503_125577571_125578132_125578258_125578948_125579069_125580092_125580205_125581210_125581323_125582345_125582421_125583520
transcript_29222.known	chr11	+	2402	19	FSM	ENSG00000134910.14	ENST00000529196.5	2402	19	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	376.734687401304	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	125564615	True	NA	24	True	NA	NA	NA	125592835	125620888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125592919_125593637_125593726_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_29223.known	chr11	+	4173	19	FSM	ENSG00000134910.14	ENST00000649491.1	4173	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	371.674887801452	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTGATGTCTTTCATAT	125564637	True	NA	-32	True	AATGAA	-11	NA	125592857	125622721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125592919_125594049_125594098_125595880_125596004_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_29227.known	chr11	+	2160	17	FSM	ENSG00000134910.14	ENST00000531491.5	2160	17	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	292.602165651162	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAATATGCAGTTTGTAAG	125564646	True	NA	24	True	NA	NA	NA	125592866	125620888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125592919_125597058_125597120_125602302_125602425_125602802_125602949_125604156_125604248_125605628_125605736_125606300_125606466_125608108_125608290_125609433_125609590_125611427_125611520_125612591_125612748_125612988_125613178_125614086_125614204_125614323_125614427_125618372_125618562_125620010_125620127_125620771
transcript_29243.known	chr11	+	3390	13	FSM	ENSG00000149554.14	ENST00000532449.6	3390	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.498947804738	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAATTTGTATAGAAT	125621010	False	NA	NA	False	NA	NA	NA	125626228	125656845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626643_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_29246.known	chr11	+	3513	13	FSM	ENSG00000149554.14	ENST00000534070.5	3513	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	78.5687950496605	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	125626280	True	NA	23	True	AATAAA	-25	NA	125626340	125657147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626576_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_29253.known	chr11	+	4128	13	FSM	ENSG00000149554.14	ENST00000438015.7	4128	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	48.6743002004138	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACAGTTCAAATTTTGA	NA	False	NA	23	True	AATAAA	-25	NA	125625162	125657147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_29254.known	chr11	+	1653	12	FSM	ENSG00000149554.14	ENST00000544373.5	1653	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	87.5080161617322	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTAAGATGAACCAATAAAG	125620758	True	NA	-31	True	AAAAAG	-24	NA	125625976	125655710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224
transcript_29255.known	chr11	+	1845	14	FSM	ENSG00000149554.14	ENST00000428830.6	1845	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	82.1032687873152	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCTTGATTCTTTCCTGG	125620755	True	NA	21	True	AATAAA	-16	NA	125625973	125676255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125626013_125626748_125626834_125627606_125627831_125629231_125629297_125629390_125629461_125633162_125633352_125635428_125635534_125637448_125637545_125643791_125643901_125644090_125644269_125644511_125644644_125653745_125653848_125655224_125655348_125675927
transcript_29259.known	chr11	-	808	2	FSM	ENSG00000260209.1	ENST00000564354.1	808	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATCAAATCTAAGCGAT	-125874375	False	NA	NA	False	TTTAAA	-15	NA	125874398	125873030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125873686_125874245
transcript_29268.known	chr11	-	1829	4	FSM	ENSG00000110060.9	ENST00000227474.8	1829	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	25.8499946271217	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-125901555	True	NA	-4	True	ATTAAA	-18	NA	125903206	125893484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125894287_125895223_125895790_125895906_125896331_125903169
transcript_29270.nnic	chr11	-	1408	4	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.6931365951495	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-125901580	True	NA	-4	True	ATTAAA	-18	NA	125903231	125893484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
transcript_29275.nnic	chr11	-	1177	4	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	-10	-230	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	35.6931365951495	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTGCAAGTACTAGGA	-125901580	True	NA	NA	False	NA	NA	NA	125903231	125893715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_125894287_125895669_125895790_125895906_125896331_125903169
transcript_29276.known	chr11	+	1451	3	FSM	ENSG00000198331.11	ENST00000425380.7	1451	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	4.5	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	125886757	True	NA	10	True	ATTAAA	-17	NA	125887667	125900646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125887766_125891422_125891473_125899343
transcript_29277.known	chr11	-	1419	3	FSM	ENSG00000110060.9	ENST00000613398.4	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	42.5	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGATTTGTTGTGTTTTT	-125901570	True	NA	-5	True	ATTAAA	-17	NA	125903221	125893485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125894287_125895223_125895790_125903169
transcript_29278.nnic	chr11	-	984	3	NNC	ENSG00000110060.9	novel	1829	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	4.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGATTTGTTGTGTTTTTC	-125901580	True	NA	-4	True	ATTAAA	-18	NA	125903231	125893484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_125894287_125895669_125895790_125903169
transcript_29284.known	chr11	-	605	3	FSM	ENSG00000110060.9	ENST00000534158.5	605	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	25.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACATCCGTATATTGGC	-125901570	True	NA	NA	False	NA	NA	NA	125903221	125895660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_125895790_125895906_125896331_125903169
transcript_29285.nnic	chr11	+	1557	2	NIC	ENSG00000198331.11	novel	1451	3	NA	NA	-156	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACTTGAACATTATTTCA	NA	False	NA	10	True	ATTAAA	-17	NA	125887511	125900646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_125887766_125899343
transcript_29288.known	chr11	+	1646	12	FSM	ENSG00000109832.14	ENST00000525943.1	1646	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	30.6588803146619	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGGCAAGATTATTTCTT	125903329	False	NA	-1	True	AATAAA	-2	NA	125903375	125923083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125903431_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_29290.known	chr11	+	7424	12	FSM	ENSG00000109832.14	ENST00000263576.11	7424	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_9	9.23521825396385	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGTCTATCTCAGTCT	125903423	True	NA	17	True	AATAAA	-33	NA	125904507	125928843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_125904581_125905211_125905279_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_29292.nic	chr11	+	1650	11	NIC	ENSG00000109832.14	novel	1646	12	NA	NA	-22	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_1	32.0405992453325	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAATCTTTGTACAGGTA	125903279	True	NA	20	True	AATAAA	-23	NA	125903325	125923104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_125903431_125905552_125905598_125906073_125906210_125908195_125908289_125908400_125908504_125910363_125910479_125911310_125911489_125917013_125917252_125918627_125918791_125921190_125921380_125922819
transcript_29311.known	chr11	-	1791	7	FSM	ENSG00000165526.9	ENST00000526942.5	1791	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.6431681574013	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGCTGTTAGCTCCAGCT	-126208291	True	NA	NA	False	NA	NA	NA	126211629	126202781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209490_126209723_126210889_126211056_126211449
transcript_29314.known	chr11	-	2468	7	FSM	ENSG00000165526.9	ENST00000298317.9	2468	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	19.6588967702214	761	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGATGACTATATTTGT	-126208312	True	NA	-3	True	AATAAA	-19	NA	126211650	126202095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126203658_126204230_126204329_126205467_126205613_126205687_126205782_126209520_126209723_126210889_126211056_126211449
transcript_2932.nic	chr1	+	929	7	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-104	19081	-68	0	5prime_fragment	FALSE	canonical	0	0	junction_6	580.899422352001	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	24615447	True	NA	NA	False	AAAAAG	-5	NA	24643203	24652514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408_24651613_24652433
transcript_29320.known	chr11	-	1030	3	FSM	ENSG00000165526.9	ENST00000532800.1	1030	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	28.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTGGGTGACAGAGTGAG	-126208292	True	NA	NA	False	NA	NA	NA	126211630	126209039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126209723_126210889_126211056_126211449
transcript_29323.known	chr11	-	2986	14	FSM	ENSG00000182934.12	ENST00000332118.11	2986	14	0	0	0	0	multi-exon	TRUE	canonical	2	178	junction_10	60.3331971186362	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTTTAGGTCTTGGAG	-126260905	True	NA	-27	True	AATAAA	-14	NA	126268895	126262937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268002_126268087_126268687
transcript_29324.known	chr11	-	2453	13	FSM	ENSG00000182934.12	ENST00000532259.1	2453	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	115.029947791386	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAGGTCCCCAGGACCT	NA	False	NA	NA	False	NA	NA	NA	126268982	126263473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126264045_126264190_126264290_126264375_126264540_126264958_126265173_126265267_126265441_126265736_126265824_126265962_126266082_126266186_126266279_126266475_126266630_126266762_126266923_126267174_126267336_126267548_126267713_126268687
transcript_2933.known	chr1	+	768	7	FSM	ENSG00000133226.18	ENST00000468822.5	768	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	716.702731650686	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAGGAGAAGACCCGAC	24615518	True	NA	NA	False	AAAAAG	-5	NA	24643274	24652514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651498_24651613_24652433
transcript_29333.known	chr11	+	1951	11	FSM	ENSG00000110074.12	ENST00000263578.10	1951	11	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_5	14.871449156017	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCAGTCTTCTGTCTCTT	126266131	True	NA	10	True	AATACA	-17	NA	126269153	126278126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_29340.known	chr11	+	1825	11	FSM	ENSG00000110074.12	ENST00000687699.1	1827	11	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_1	92.319282926158	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCAATCCATCTGGAGGCC	126266186	True	NA	NA	False	NA	NA	NA	126269208	126277931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269416_126271436_126271658_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_29355.known	chr11	+	1760	10	FSM	ENSG00000110074.12	ENST00000527004.5	1760	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	129.599382714579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGATTTTCGTCTGTTTA	126266167	True	NA	-47	True	NA	NA	NA	126269189	126278069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269292_126271436_126271658_126272968_126273080_126273338_126273455_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_29358.known	chr11	+	1427	10	FSM	ENSG00000110074.12	ENST00000525770.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	96.3605626005336	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCAGGCACAGGCAGTGAG	126266148	True	NA	NA	False	NA	NA	NA	126269170	126277840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126269292_126272968_126273080_126273335_126273455_126274926_126275022_126275326_126275429_126275793_126275871_126276058_126276220_126276393_126276524_126277070_126277176_126277434
transcript_2936.known	chr1	+	673	6	FSM	ENSG00000133226.18	ENST00000490543.5	673	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	730.522169410347	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATCATACAATAGATGCAT	24615548	True	NA	85	True	AAAAAG	-44	NA	24643304	24650086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24643348_24645983_24646074_24646666_24646790_24647078_24647209_24648858_24649030_24649970
transcript_29366.known	chr11	+	2016	9	FSM	ENSG00000197798.9	ENST00000533050.6	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_7	58.7663541067506	427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTATTTCTCTGGGCAG	126208702	True	NA	-16	True	TATAAA	-1	NA	126211781	126262968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_29371.nic	chr11	+	1734	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_7	92.5053207929144	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208644	True	NA	-11	True	NA	NA	NA	126211723	126262631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_29372.nic	chr11	+	2015	9	NIC	ENSG00000197798.9	novel	2016	9	NA	NA	9	0	combination_of_known_junctions	FALSE	canonical	3	168	junction_7	92.5053207929144	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGACCTAAAAGGCAATTTA	126208653	True	NA	-2	True	TATAAA	-9	NA	126211732	126262921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_2938.nic	chr1	+	1651	6	ISM	ENSG00000133226.18	ENST00000479034.5	2671	17	-104	19180	-68	-94	5prime_fragment	FALSE	canonical	3	1308	junction_5	152.325441079289	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTTTGTTTCCACAGTG	24615447	True	NA	NA	False	NA	NA	NA	24643203	24652415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970_24650087_24651408
transcript_29397.nic	chr11	+	1673	8	NIC	ENSG00000197798.9	novel	1616	8	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	3	56	junction_1	139.143150483704	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208639	True	NA	-11	True	NA	NA	NA	126211718	126262631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_29400.known	chr11	+	1616	8	FSM	ENSG00000197798.9	ENST00000360194.8	1616	8	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	153.869809798241	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCTTGTTCATTTACTTGC	126208693	True	NA	-11	True	NA	NA	NA	126211772	126262631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126211831_126234994_126235088_126240791_126241045_126250505_126250734_126254304_126254434_126256566_126256853_126261427_126261485_126262119
transcript_2941.nic	chr1	+	590	5	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-71	2482	-68	0	5prime_fragment	FALSE	canonical	3	1387	junction_1	125.776339189849	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAAAGAAAGCAGCA	24615447	True	NA	31	True	GATAAA	-9	NA	24643203	24650032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858_24649030_24649970
transcript_2942.nic	chr1	+	514	4	ISM	ENSG00000133226.18	ENST00000468822.5	768	7	-71	3499	-68	128	5prime_fragment	FALSE	canonical	3	1387	junction_1	144.573702849293	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAACAAAGACAGGTAATA	24615447	True	NA	NA	False	AAGAAA	-8	NA	24643203	24649015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_24643348_24645983_24646074_24646666_24646790_24648858
transcript_29428.known	chr11	-	856	3	FSM	ENSG00000182934.12	ENST00000528744.5	856	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTTGAGTTCTTTGGAT	-126260930	True	NA	36	True	AAAAAG	-38	NA	126268920	126267173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126267713_126268002_126268087_126268687
transcript_29429.known	chr11	+	1862	8	FSM	ENSG00000197798.9	ENST00000627851.2	1862	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	154.334383857961	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGACAGCCTTCACCTTAT	126208644	True	NA	0	True	TATAAA	-17	NA	126211723	126262984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126211831_126229224_126229294_126234994_126235088_126240791_126241045_126254304_126254434_126256566_126256853_126261424_126261485_126262119
transcript_29430.known	chr11	+	5427	6	FSM	ENSG00000110063.10	ENST00000263579.5	5427	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_2	12.1885191881541	900	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTTGGTTTTTTTGC	126300388	True	NA	11	True	AATAAA	-24	NA	126304059	126350005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126304282_126306569_126306745_126331404_126331551_126338285_126338400_126343306_126343418_126345346
transcript_29447.known	chr11	-	416	2	FSM	ENSG00000255062.2	ENST00000524964.2	423	2	5	2	3	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCTTTGAAGTGAATCG	-126303784	True	NA	-1	True	AATAAA	-38	NA	126304318	126294297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126294603_126304207
transcript_29448.known	chr11	-	1572	2	FSM	ENSG00000280832.2	ENST00000629441.2	1579	2	0	7	0	-7	multi-exon	FALSE	canonical	3	45	junction_1	0	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACACACAGGTGATCCTTT	-126355044	True	NA	NA	False	AATAAA	-15	NA	126355579	126340888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_126342323_126355441
transcript_2945.known	chr1	+	2723	7	FSM	ENSG00000169504.15	ENST00000488683.1	2723	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	898.760751751482	902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAAGGATTCTTTTTTCCC	24689153	True	NA	13	True	AATAAA	-17	NA	24745381	24844267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772_24842588_24844128
transcript_29451.known	chr11	+	2189	5	FSM	ENSG00000150455.14	ENST00000392679.6	2189	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.38484800354236	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAATCAG	126282542	True	NA	NA	False	NA	NA	NA	126283092	126294933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126283154_126290461_126290586_126290802_126290962_126292476_126293056_126293667
transcript_29452.known	chr11	+	1264	5	FSM	ENSG00000150455.14	ENST00000392678.7	1264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.30116263352131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGCCTTGGTTTCCTC	126282559	True	NA	11	True	CATAAA	-28	NA	126283109	126293244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126283154_126289664_126289834_126290461_126290586_126290802_126290962_126292476
transcript_29453.known	chr11	+	1810	11	FSM	ENSG00000110080.20	ENST00000444328.7	1810	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	7.54254598925323	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGATGTCCTGTGT	126354301	True	NA	13	True	ATTAAA	-21	NA	126355685	126414638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_126355843_126406095_126406172_126406472_126406558_126406942_126407024_126407251_126407350_126407573_126407635_126408098_126408195_126408306_126408497_126409267_126409412_126413504_126413649_126413960
transcript_29454.known	chr11	-	5139	10	FSM	ENSG00000134954.14	ENST00000392668.8	5139	10	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	11.5705031528398	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTGGCTTTGGCTTGAT	-128583489	True	NA	-7	True	ATTAAA	-22	NA	128587558	128458764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128462577_128463508_128463628_128480190_128480452_128484822_128485072_128486068_128486147_128489289_128489491_128490456_128490577_128556290_128556436_128573061_128573145_128587487
transcript_29456.nnic	chr11	-	718	5	NNC	ENSG00000134954.14	novel	655	4	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	60.6233247191211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	-128583494	True	NA	NA	False	AATAAA	-15	NA	128587563	128536411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_128536784_128545609_128545652_128556290_128556436_128573061_128573145_128587487
transcript_29461.known	chr11	-	655	4	FSM	ENSG00000134954.14	ENST00000525404.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	52.6645569197687	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCTTATATTTTTATTT	-128583473	True	NA	NA	False	AATAAA	-15	NA	128587542	128536411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128536784_128556290_128556436_128573061_128573145_128587487
transcript_29463.nnic	chr11	+	947	2	Antisense	novelGene_ENSG00000134954.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGCTTTATTTCTTTGG	128582885	True	NA	NA	False	AATAAA	-20	NA	128583055	128587134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_128583208_128586339
transcript_29465.nnic	chr11	+	1001	2	Antisense	novelGene_ENSG00000134954.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGTTTCTGACAAGTAA	128582885	True	NA	NA	False	NA	NA	NA	128583055	128587188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_128583208_128586339
transcript_29467.nnic	chr11	-	1085	2	NNC	ENSG00000134954.14	novel	5139	10	NA	NA	-308	-10876	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTGCAAAATTCTTGAC	NA	False	NA	NA	False	ATTAAA	-19	NA	128587866	128582683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_128583390_128587487
transcript_29468.nnic	chr11	-	516	2	NNC	ENSG00000134954.14	novel	5139	10	NA	NA	-7	-11144	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAACAAACAAGAAATCTTG	-128583496	True	NA	NA	False	AAAAAG	-34	NA	128587565	128582951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_128583390_128587487
transcript_2947.known	chr1	+	4253	6	FSM	ENSG00000169504.15	ENST00000374379.9	4253	6	0	0	0	0	multi-exon	FALSE	canonical	3	2230	junction_2	116.105813807923	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGAGACTACTATTTT	24689218	True	NA	12	True	AATAAA	-19	NA	24745446	24844321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24745626_24797741_24797852_24814093_24814220_24827009_24827117_24839859_24840042_24840772
transcript_29470.known	chr11	-	3624	4	FSM	ENSG00000174370.12	ENST00000310799.9	3624	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCCTGTCTATAACC	-128905627	False	NA	NA	False	AATAAA	-34	NA	128905697	128899564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128902714_128903366_128903512_128904430_128904612_128905548
transcript_29471.known	chr11	-	609	4	FSM	ENSG00000174370.12	ENST00000524878.2	3609	4	9	2991	9	-2991	multi-exon	FALSE	canonical	1	2	junction_2	3.09120616516523	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTCTCCTTGCCAATAG	-128905965	True	NA	NA	False	NA	NA	NA	128906035	128902556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_128902714_128903366_128903512_128904430_128904612_128905909
transcript_29473.known	chr11	+	2205	6	FSM	ENSG00000151715.8	ENST00000281441.8	2205	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.5298221281347	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAAAGGAGAGGAGGGGA	129815816	True	NA	NA	False	NA	NA	NA	129815847	129860003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_129815899_129852474_129852661_129854609_129854817_129855707_129855893_129857312_129857459_129858573
transcript_29485.known	chr11	-	5173	27	FSM	ENSG00000170322.15	ENST00000682444.1	5173	27	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_25	28.4252367244362	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTGTTTGTTTGTTTGTT	-129892371	True	NA	-4	True	AGTAAA	-18	NA	129895578	129863635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_129864851_129864965_129865102_129865876_129865984_129869493_129870262_129872883_129873097_129873744_129874016_129874112_129874334_129874500_129874581_129874792_129874917_129875356_129875464_129876720_129876896_129877324_129877386_129878308_129878356_129878463_129878544_129881442_129881509_129881726_129881854_129882085_129882195_129882450_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129894358_129894439_129895495
transcript_29487.nic	chr11	-	1057	9	NIC	ENSG00000170322.15	novel	5173	27	NA	NA	-2	2156	combination_of_known_junctions	FALSE	canonical	3	48	junction_8	42.0765671128242	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-129892379	True	NA	-2	True	AAAAAG	-13	NA	129895586	129882587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884847_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_29488.nic	chr11	-	1093	9	NIC	ENSG00000170322.15	novel	3066	23	NA	NA	-2	2156	combination_of_known_junctions	FALSE	canonical	3	48	junction_4	46.5105834730118	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAGGAAAAGAAGAAGAAGAA	-129892379	True	NA	-2	True	AAAAAG	-13	NA	129895586	129882587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129882632_129883121_129883207_129884069_129884144_129884744_129884883_129885434_129885610_129886316_129886445_129888593_129888796_129892714_129892871_129895495
transcript_29497.nic	chr11	-	624	4	NIC	ENSG00000170322.15	novel	539	3	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	68.2788400604463	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCCTTCATGTCTGGTC	-129892379	True	NA	NA	False	AATAAA	-20	NA	129895586	129888312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_129888488_129888593_129888796_129892714_129892871_129895495
transcript_29499.nic	chr11	-	807	4	ISM	ENSG00000170322.15	ENST00000682444.1	5173	27	-10	24682	2	-5	5prime_fragment	FALSE	canonical	3	68	junction_2	40.1081870279207	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGGTGCCCTTCATGTC	-129892381	True	NA	NA	False	AATAAA	-15	NA	129895588	129888317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129888796_129892714_129892871_129894358_129894439_129895495
transcript_2950.known	chr1	+	439	2	FSM	ENSG00000169504.15	ENST00000489758.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	3	2510	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCTGGTTTATGGACAAA	24689180	True	NA	NA	False	ATTAAA	-3	NA	24745408	24797963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_24745626_24797741
transcript_29503.nic	chr11	-	1964	4	ISM	ENSG00000170325.16	ENST00000531431.1	528	5	-243	6211	-193	-6211	5prime_fragment	FALSE	canonical	3	22	junction_3	4.54606056566195	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATTAAATTAAAAT	-130002942	True	NA	NA	False	NA	NA	NA	130003028	129954266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129955572_129957745_129957911_129960895_129961083_130002721
transcript_29505.nic	chr11	-	1285	2	ISM	ENSG00000170325.16	ENST00000531431.1	528	5	-64	11870	-14	-11870	5prime_fragment	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAATTAGCCGGACATGG	-130001686	True	NA	NA	False	NA	NA	NA	130002849	129959925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_-_129961083_130002721
transcript_29507.known	chr11	+	3727	18	FSM	ENSG00000084234.18	ENST00000263574.9	3727	18	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_14	703.158593007591	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTCGTTTCACTGACTGC	130029741	True	NA	32	True	AATAAA	-21	NA	130069905	130144811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130137255_130137292_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_29510.known	chr11	+	3697	17	FSM	ENSG00000084234.18	ENST00000338167.10	3697	17	0	0	0	0	multi-exon	FALSE	canonical	3	638	junction_7	497.655880101903	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGACTGCTCGTTTCACT	130029729	True	NA	26	True	AATAAA	-15	NA	130069893	130144805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130123611_130123780_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_29516.known	chr11	+	2530	16	FSM	ENSG00000084234.18	ENST00000528499.5	2530	16	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_6	257.563368686017	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATATGCAGGCTGTCGTT	130029729	True	NA	17	True	AATAAA	-28	NA	130069893	130143806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613_130121811_130122304_130122514_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_2952.known	chr1	-	1757	7	FSM	ENSG00000117614.10	ENST00000236273.9	1757	7	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_6	59.2977421342687	3199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGGATATTTTAAATTCAA	-25222161	True	NA	NA	False	ATTAAA	-15	NA	25232502	25222275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25228997_25229124_25232103_25232212_25232443
transcript_29523.nic	chr11	+	794	5	ISM	ENSG00000084234.18	ENST00000528499.5	2530	16	-41	22040	16	0	5prime_fragment	FALSE	canonical	3	1754	junction_3	208.347516183899	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGGAAGATGAAGA	130029688	True	NA	NA	False	NA	NA	NA	130069852	130121766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr11_+_130070083_130109428_130109603_130110537_130110662_130120705_130120819_130121613
transcript_29524.known	chr11	+	579	4	FSM	ENSG00000084234.18	ENST00000527702.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	92	junction_1	891.286087005115	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGGAAGAGGAAGATGAAGA	130029729	True	NA	NA	False	NA	NA	NA	130069893	130121766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130110537_130110662_130120705_130120819_130121613
transcript_29527.known	chr11	+	1862	13	FSM	ENSG00000084234.18	ENST00000345598.9	1862	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	614.59977944097	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATCTATTGCAGATATTT	130029751	True	NA	19	True	TATAAA	-16	NA	130069915	130143679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130070083_130109428_130109603_130110537_130110662_130126699_130126831_130127765_130127841_130129047_130129207_130130037_130130167_130133628_130133729_130135562_130135716_130140397_130140484_130141497_130141573_130141918_130142075_130143346
transcript_29528.known	chr11	+	3305	19	FSM	ENSG00000149418.11	ENST00000278742.6	3305	19	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_10	19.1927358943719	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAAGTTTCTTTTCCTACT	130157285	True	NA	19	True	AGTAAA	-19	NA	130159781	130210362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130160061_130188113_130188274_130188529_130188658_130188868_130188940_130189738_130189897_130190112_130190149_130190453_130190695_130194148_130194289_130194639_130194738_130196338_130196449_130196569_130196701_130197840_130197946_130198307_130198419_130198507_130198622_130198946_130199070_130199950_130200138_130208409_130208685_130209441_130209579_130209661
transcript_2953.known	chr1	-	926	6	FSM	ENSG00000117614.10	ENST00000354361.3	926	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	265.523633599723	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCATTTTGGGCTTAAGA	-25222145	True	NA	18	True	TTTAAA	-23	NA	25232486	25222964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25223432_25225001_25225101_25227441_25227533_25228117_25228236_25232103_25232212_25232443
transcript_29539.known	chr11	+	330	3	FSM	ENSG00000175773.14	ENST00000602310.2	348	3	11	7	11	-7	multi-exon	FALSE	canonical	0	0	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGAATCTGTCATTTTTA	130314995	True	NA	NA	False	AATATA	-18	NA	130315038	130315683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_130315116_130315327_130315448_130315550
transcript_2954.known	chr1	-	438	2	FSM	ENSG00000117614.10	ENST00000474160.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAGGAAAAGAAAAAGGTT	-25232417	False	NA	NA	False	AAAAAG	-25	NA	25232432	25229014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25229124_25232103
transcript_29544.nnic	chr11	+	319	2	Genic_Genomic	ENSG00000175773.14	novel	669	6	NA	NA	-498	8410	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTGCTTCTCTGGAG	130314436	True	NA	NA	False	AATAAA	-19	NA	130314494	130324100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_+_130314604_130323890
transcript_2955.known	chr1	-	1962	2	FSM	ENSG00000117614.10	ENST00000476231.1	1962	2	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAAAAAAAAAAGACTCT	-25222161	True	NA	NA	False	AATAGA	-25	NA	25232502	25230308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25232212_25232443
transcript_29557.nnic	chr11	+	483	3	Fusion	ENSG00000231698.3_ENSG00000182667.15	novel	755	2	NA	NA	-33	19844	multi-exon	FALSE	canonical	0	0	junction_1	0	41	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCGAACCTGACAAAAAAG	NA	False	NA	NA	False	AAGAAA	-11	NA	131253326	131370761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_131253592_131350308_131350453_131370687
transcript_29562.nnic	chr11	+	493	3	Fusion	ENSG00000231698.3_ENSG00000182667.15	novel	998	2	NA	NA	-16	19838	multi-exon	FALSE	canonical	0	0	junction_2	8	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAACCGAACCTGACA	NA	False	NA	NA	False	AAGAAA	-5	NA	131253343	131370755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_131253592_131254341_131254519_131370687
transcript_29564.nnic	chr11	+	741	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	-9	-352	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	3	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	NA	False	NA	10	True	NA	NA	NA	131253350	131300771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_29565.nnic	chr11	+	1093	3	NNC	ENSG00000231698.3	novel	998	2	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	3	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAGTGCATGGACACCT	NA	False	NA	26	True	AGTAAA	-40	NA	131253350	131301123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_131253592_131291592_131291679_131300357
transcript_29573.known	chr11	+	584	2	FSM	ENSG00000231698.3	ENST00000416553.2	998	2	62	352	-24	-352	multi-exon	FALSE	canonical	3	135	junction_1	0	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGTTTTGTTATTT	131250228	True	NA	10	True	NA	NA	NA	131253421	131300771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_131253592_131300357
transcript_29575.nnic	chr11	+	361	2	Fusion	ENSG00000231698.3_ENSG00000182667.15	novel	998	2	NA	NA	-27	19872	multi-exon	FALSE	canonical	2	13	junction_1	0	317	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAAAAATCATG	NA	False	NA	NA	False	AAAAAG	-9	NA	131253332	131370789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr11_+_131253592_131370687
transcript_29577.nnic	chr11	+	950	2	NNC	ENSG00000231698.3	novel	998	2	NA	NA	9	-19	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAATGGATGCACACTAT	131250175	True	NA	7	True	AGTAAA	-21	NA	131253368	131301104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_131253592_131300377
transcript_29579.known	chr11	+	2550	6	FSM	ENSG00000182667.15	ENST00000539799.5	2550	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	5.86515131944607	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGGTGTGGTACCTCATT	NA	False	NA	8	True	ATTAAA	-22	NA	132146274	132336821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_132146515_132212021_132212148_132307688_132307824_132310111_132310233_132314551_132314704_132335045
transcript_29586.nnic	chr11	-	587	2	Antisense	novelGene_ENSG00000182667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATTTATTTAAACTTA	-131911365	True	NA	2	True	AATAAA	-19	NA	131911410	131903392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_131903579_131911009
transcript_29588.nnic	chr11	-	494	2	Antisense	novelGene_ENSG00000182667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATTTATTTAAACTTA	-131911372	True	NA	2	True	AATAAA	-19	NA	131911417	131903392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_131903579_131911109
transcript_29590.nnic	chr11	-	325	2	Antisense	novelGene_ENSG00000182667.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_1	0	83	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGCATTTATTTAAACTTA	NA	False	NA	2	True	AATAAA	-19	NA	131911638	131903392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_-_131903579_131911499
transcript_29599.nnic	chr11	+	1150	3	Antisense	novelGene_ENSG00000279189.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGAAGTCTGACTGTGAGA	133302290	True	NA	NA	False	AATAAA	-15	NA	133302332	133305456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr11_+_133302421_133304083_133304153_133304463
transcript_29602.nnic	chr11	-	1320	4	NNC	ENSG00000080854.16	novel	904	3	NA	NA	-6463	262	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	6.0184900284226	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAAGCCTTTGTTTCTTGG	-133918756	True	NA	NA	False	ACTAAA	-1	NA	133918825	133908301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_-_133909278_133911885_133912008_133918256_133918303_133918649
transcript_29603.known	chr11	+	3765	9	FSM	ENSG00000166086.13	ENST00000299106.9	3765	9	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_7	17.8518206354422	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAACCAACGCACATCATCA	134068049	True	NA	NA	False	NA	NA	NA	134069071	134152001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134069160_134139850_134139917_134140656_134140771_134144240_134144394_134144791_134144995_134145945_134146046_134148546_134148677_134148763_134148819_134149145
transcript_29606.known	chr11	+	3661	6	FSM	ENSG00000151502.11	ENST00000281187.10	3661	6	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_5	14.6642422238587	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGTTCTGTGGTCTCTTC	134222710	True	NA	45	True	ATTAAA	-42	NA	134224670	134247788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134225346_134234896_134235054_134239990_134240156_134243118_134243295_134244937_134245081_134245443
transcript_29613.known	chr11	-	532	3	FSM	ENSG00000151503.14	ENST00000532445.2	2553	3	0	2021	0	-354	multi-exon	FALSE	canonical	0	0	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTCACATGAGTGAAAATGG	NA	False	NA	NA	False	NA	NA	NA	134225454	134223446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134223483_134223862_134224001_134225096
transcript_29614.known	chr11	-	5539	35	FSM	ENSG00000151503.14	ENST00000534532.7	5561	35	22	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	46.7736302990209	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATAGGATTTTTCTGTT	-134224390	True	NA	NA	False	AATAAA	-29	NA	134224532	134152433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134153053_134153139_134153201_134153288_134153364_134157017_134157096_134157927_134158068_134158328_134158496_134159891_134160075_134161780_134161892_134167995_134168196_134168468_134168529_134168916_134169055_134176306_134176387_134177218_134177458_134178633_134178742_134178821_134178937_134181076_134181185_134184636_134184753_134184902_134185001_134185334_134185527_134192688_134192910_134194015_134194151_134194664_134194739_134202815_134202906_134203141_134203199_134203653_134203907_134204045_134204172_134204898_134204972_134206598_134206733_134208863_134208952_134209144_134209207_134209312_134209478_134210269_134210455_134216935_134217099_134220571_134220727_134223862
transcript_29619.known	chr11	-	943	8	FSM	ENSG00000151500.15	ENST00000392594.7	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_7	510.554160712072	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238875	True	NA	-18	True	AATAAA	-18	NA	134253370	134248278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_29628.nic	chr11	-	830	7	NIC	ENSG00000151500.15	novel	835	7	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	3	277	junction_6	668.535380930251	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	NA	False	NA	23	True	AATAAA	-9	NA	134253417	134248287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253298
transcript_29635.known	chr11	-	1304	7	FSM	ENSG00000151500.15	ENST00000341541.8	1304	7	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	248.124296808407	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTTCTTCTAAAACCA	-134238857	True	NA	-21	True	AATAAA	-15	NA	134253352	134248281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839
transcript_29636.known	chr11	-	835	7	FSM	ENSG00000151500.15	ENST00000352327.5	835	7	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_1	502.289314594244	1923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGAAGAACTTTTCTTCTA	-134238855	True	NA	23	True	AATAAA	-9	NA	134253350	134248287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_29637.known	chr11	-	893	8	FSM	ENSG00000151500.15	ENST00000392595.6	893	8	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	254.493173798835	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTCTTCTAAAACCACAC	-134238753	False	NA	-18	True	AATAAA	-18	NA	134253248	134248278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_-_134248485_134248808_134248960_134249166_134249263_134249827_134249921_134250274_134250344_134251129_134251309_134252839_134252917_134253226
transcript_29645.nic	chr11	+	1610	11	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-23	150	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	133.070244607876	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCTTGGTAGTCACAGAC	134250006	True	NA	13	True	AATAAA	-23	NA	134253524	134263108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134262769
transcript_29647.known	chr11	+	2176	11	FSM	ENSG00000151498.12	ENST00000281182.9	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_3	42.9745273388783	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134250049	True	NA	39	True	AATAAA	-28	NA	134253567	134265855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_29651.nic	chr11	+	2049	10	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_2	131.734113058121	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGGCTCCTTAAATTATTA	134250006	True	NA	39	True	AATAAA	-28	NA	134253524	134265855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134258514_134258625_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_29655.known	chr11	+	1797	8	FSM	ENSG00000151498.12	ENST00000374752.6	1797	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	160.313086534711	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGCAGGCTCCTTAAAT	134250042	True	NA	34	True	AATAAA	-23	NA	134253560	134265850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134253710_134259007_134259085_134259607_134259746_134261043_134261180_134261274_134261373_134261737_134261891_134262519_134262623_134264907
transcript_29656.nic	chr11	+	917	7	NIC	ENSG00000151498.12	novel	2176	11	NA	NA	-23	24	combination_of_known_junctions	FALSE	canonical	3	24	junction_6	162.805610058949	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATTGTGGGTATTTCAG	134250006	True	NA	10	True	AATAAA	-16	NA	134253524	134260164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr11_+_134253710_134256547_134256649_134257087_134257258_134258514_134258625_134259007_134259085_134259607_134259746_134260028
transcript_2966.nic	chr1	-	1537	6	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-64	0	intron_retention	FALSE	canonical	2	3	junction_2	41.5095169810491	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-24	True	AATAAA	-20	NA	25247521	25242248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443_25247030_25247308
transcript_29671.nnic	chr11	-	1842	2	Genic_Genomic	ENSG00000289399.1	novel	922	1	NA	NA	-155	3251	multi-exon	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCTTTACAGTTCAATA	-134276344	False	NA	-2	True	AATAAA	-22	NA	134276356	134272028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr11_-_134272699_134275184
transcript_29674.known	chr11	+	3566	10	FSM	ENSG00000166105.16	ENST00000389887.9	3566	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_9	61.8075467844031	922	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATAGAGTATGCTTCTTAC	134274229	False	NA	2	True	AATAAA	-15	NA	134274244	134305308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134276764_134277325_134277452_134277699_134277913_134281376_134281446_134282024_134282121_134283736_134283846_134288797_134288891_134292131_134292214_134293144_134293210_134305114
transcript_29678.nnic	chr11	+	1105	5	NNC	ENSG00000149328.15	novel	3251	19	NA	NA	-1	-19232	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	50.3506454774911	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGTTATGGTTTTGTCT	134331515	True	NA	NA	False	GATAAA	-17	NA	134331986	134345848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr11_+_134332148_134342753_134342952_134344386_134344456_134345033_134345130_134345267
transcript_29679.known	chr11	+	864	3	FSM	ENSG00000255545.8	ENST00000657630.1	864	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATGGAGTGAAACGCGCA	134412187	True	NA	NA	False	ATTAAA	-16	NA	134412283	134439007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr11_+_134412339_134436482_134436785_134438500
transcript_29687.nnic	chr12	-	649	3	NNC	ENSG00000226210.3	novel	1817	11	NA	NA	594	-10712	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	119.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGGAACAGTGCCTGGC	NA	False	NA	NA	False	ATTAAA	-19	NA	31421	25233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_25682_26800_26955_31374
transcript_29689.nic	chr12	-	1233	4	ISM	ENSG00000073614.13	ENST00000399788.7	10701	28	-244	85654	-244	259	5prime_fragment	FALSE	canonical	3	42	junction_1	5.09901951359278	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTGAAAAAGTCCTGTT	-389183	False	NA	NA	False	AATAAA	-16	NA	389564	365710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_366105_384030_384154_385896_385975_388926
transcript_29694.known	chr12	+	2300	13	FSM	ENSG00000120647.10	ENST00000239830.9	2300	13	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	34.5265598247687	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398831	True	NA	15	True	AATAAA	-16	NA	401643	442642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_401685_405510_405565_409367_409422_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_29701.known	chr12	+	2338	12	FSM	ENSG00000120647.10	ENST00000422000.5	2338	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	48.570643788368	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGATTTTCTTTGAGTTT	389245	True	NA	11	True	AATAAA	-12	NA	389349	442638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_389487_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_29703.known	chr12	+	2253	12	FSM	ENSG00000120647.10	ENST00000412006.6	2253	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	27.0860276261024	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTGAGTTTTCTG	398824	True	NA	15	True	AATAAA	-16	NA	401636	442642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_401685_405510_405565_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_29706.known	chr12	+	1652	11	FSM	ENSG00000120647.10	ENST00000540180.5	1652	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	49.3806642320656	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTGAGTTGACTAGAGT	389243	True	NA	NA	False	NA	NA	NA	389347	442004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_389487_411746_411979_418493_418637_428768_428866_430663_430737_431865_431955_433173_433323_438334_438555_440616_440743_440843_440997_441773
transcript_29722.known	chr12	-	670	4	FSM	ENSG00000171840.13	ENST00000542920.1	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTCCCTACCCACAGCA	NA	False	NA	NA	False	NA	NA	NA	643665	564580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_564682_565216_565402_565949_566179_643510
transcript_29723.known	chr12	+	1035	3	FSM	ENSG00000177406.5	ENST00000543884.2	1035	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTTTTAGAAAGTTTT	NA	False	NA	NA	False	AATAAA	-15	NA	642673	664142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_642739_643958_644103_663316
transcript_29735.known	chr12	-	569	3	FSM	ENSG00000250132.6	ENST00000545629.5	569	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCTACTGCAGGAAGA	-991015	True	NA	NA	False	AAAAAG	-15	NA	991122	976803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_977068_989808_990042_991050
transcript_29736.known	chr12	-	501	3	FSM	ENSG00000250132.6	ENST00000539259.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAATAAACTGCTTGTAC	-991083	True	NA	-23	True	NA	NA	NA	991190	976978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_977107_989808_990042_991050
transcript_29737.known	chr12	+	2238	5	FSM	ENSG00000111186.13	ENST00000397196.7	2238	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.80073525436772	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTGCTCCCTTTCCTTA	1629217	True	NA	6	True	ATTAAA	-14	NA	1629230	1647212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_1629372_1631297_1631435_1632657_1632906_1639683_1639977_1645793
transcript_29738.nnic	chr12	+	1621	8	NIC	ENSG00000006831.10	novel	3971	8	NA	NA	-38	-2410	combination_of_known_splicesites	FALSE	canonical	3	49	junction_1	13.5058566283411	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGAGTGCATCAATTGGG	1688814	True	NA	10	True	AATAAA	-14	NA	1691031	1786264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_1691214_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_29739.known	chr12	+	3971	8	FSM	ENSG00000006831.10	ENST00000357103.5	3971	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	22.4871845589383	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGACCTGTCGTGTGTTTT	1688852	True	NA	NA	False	AATAAA	-16	NA	1691069	1788674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_1691192_1754257_1754515_1772841_1772962_1777853_1778026_1780450_1780638_1780888_1781077_1783879_1784074_1785943
transcript_2974.known	chr1	-	1425	5	FSM	ENSG00000117616.18	ENST00000243189.12	1425	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	33.3691474269272	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25243634_25245149_25245302_25246443_25247030_25247308
transcript_29741.known	chr12	-	575	3	FSM	ENSG00000151062.15	ENST00000543405.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGGGTGATAGGTGCATC	NA	False	NA	NA	False	NA	NA	NA	1797557	1795059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1795382_1795667_1795781_1797417
transcript_29742.known	chr12	-	2073	10	FSM	ENSG00000151065.14	ENST00000543381.5	2073	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	90.7364927199146	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCATGTTGAGTGTT	-2000725	True	NA	-102	True	TTTAAA	-38	NA	2004470	1946151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1991120_1991247_1993263_1993392_1997934_1997976_2004281
transcript_29744.known	chr12	-	2033	9	FSM	ENSG00000151065.14	ENST00000280665.11	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	23.5687160235767	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGTGTTTTTTAATTAT	-2000712	True	NA	-3	True	AGTAAA	-23	NA	2004457	1946052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1946287_1949085_1949335_1952415_1953289_1955431_1955561_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_29746.known	chr12	-	598	6	FSM	ENSG00000151065.14	ENST00000537725.1	598	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	90.5560599849618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAGTACAGGAACCCTT	-2000682	True	NA	NA	False	NA	NA	NA	2004427	1961315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1961396_1965557_1965694_1967843_1967911_1993263_1993392_1997934_1997976_2004281
transcript_29749.nic	chr12	-	602	4	ISM	ENSG00000151065.14	ENST00000543381.5	2073	10	-101	44952	-36	352	5prime_fragment	FALSE	canonical	2	3	junction_1	114.805148936022	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAATGTTTCTAATGA	-2000826	True	NA	NA	False	ATTAAA	-36	NA	2004571	1991103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_1991247_1993263_1993392_1997934_1997976_2004281
transcript_29750.known	chr12	-	2231	3	FSM	ENSG00000151065.14	ENST00000535873.2	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	2.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTCTTTGTATTTTTT	-2000790	True	NA	NA	False	AATAAA	-18	NA	2004535	1991455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_1993392_1997934_1997976_2004281
transcript_29753.nnic	chr12	-	866	3	NNC	ENSG00000151065.14	novel	2033	9	NA	NA	-161	-5658	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	119.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTGTTATCAGATATTA	NA	False	NA	NA	False	AATAAA	-17	NA	2004696	1997113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_1997524_1997934_1997976_2004281
transcript_29754.known	chr12	+	629	2	FSM	ENSG00000203593.3	ENST00000354425.4	629	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCCATTAACTAGGTGT	2004645	True	NA	NA	False	NA	NA	NA	2004665	2011392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2004737_2010834
transcript_29758.nnic	chr12	-	1174	4	Fusion	ENSG00000246627.6_ENSG00000256271.1	novel	2191	4	NA	NA	-2	0	intron_retention	FALSE	canonical	0	0	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-2691066	True	NA	NA	False	ATTAAA	-20	NA	2691159	2668499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_2669017_2672128_2672247_2677711_2677898_2690806
transcript_29761.nnic	chr12	-	1065	3	Fusion	ENSG00000246627.6_ENSG00000256271.1	novel	609	2	NA	NA	-36	0	intron_retention	FALSE	canonical	3	9	junction_2	1.5	76	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-2691161	False	NA	NA	False	ATTAAA	-20	NA	2691236	2668499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_2669017_2672128_2672247_2690806
transcript_29762.nnic	chr12	-	739	3	Fusion	ENSG00000246627.6_ENSG00000256271.1	novel	609	2	NA	NA	-15	0	multi-exon	FALSE	canonical	0	0	junction_2	6	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-2691097	False	NA	NA	False	ATTAAA	-20	NA	2691172	2668499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_2669017_2672128_2672247_2691068
transcript_29763.known	chr12	-	609	2	FSM	ENSG00000256271.1	ENST00000545526.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATTTCTT	-2672186	False	NA	NA	False	ATTAAA	-20	NA	2672220	2668499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2669017_2672128
transcript_2977.known	chr1	-	2013	5	FSM	ENSG00000117616.18	ENST00000568254.5	2013	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	45.8005185560164	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25243917	True	NA	-30	True	AATAAA	-14	NA	25247457	25242254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25244225_25245149_25245302_25246443_25247030_25247308
transcript_29770.known	chr12	+	2320	12	FSM	ENSG00000111203.13	ENST00000228799.7	2320	12	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	18.9688740261034	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGCTCTCAGTGTAGGTA	2810900	True	NA	18	True	AATAAA	-24	NA	2812667	2825076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105_2818278_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_2978.nic	chr1	-	2357	5	NIC	ENSG00000117616.18	novel	1425	5	NA	NA	-64	0	intron_retention	FALSE	canonical	3	65	junction_2	19.421315609402	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	NA	False	NA	-24	True	AATAAA	-20	NA	25247521	25242248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_25242706_25243549_25244499_25245149_25245302_25246443_25247030_25247308
transcript_29780.known	chr12	+	3715	10	FSM	ENSG00000004478.8	ENST00000001008.6	3715	10	0	0	0	0	multi-exon	FALSE	canonical	3	1768	junction_3	72.1194140058224	1468	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTACAAGTCTTTCAGCC	2767575	True	NA	18	True	ATTAAA	-29	NA	2794969	2805423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2795245_2797137_2797283_2797728_2797872_2798705_2798827_2799087_2799245_2799849_2799941_2800038_2800123_2800391_2800578_2801116_2801357_2803150
transcript_29783.known	chr12	+	1419	9	FSM	ENSG00000111203.13	ENST00000537851.5	1419	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	40.9687380816153	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGAAAACAGAGACTTGTT	2810917	True	NA	NA	False	NA	NA	NA	2812684	2824502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2812857_2820085_2820226_2820723_2820873_2821261_2821360_2821542_2821597_2821691_2821793_2822793_2822912_2823769_2823944_2824089
transcript_29785.known	chr12	-	3552	9	FSM	ENSG00000111206.13	ENST00000359843.8	3552	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	124.211450257213	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTCTGTGGTTTATTGG	-2877162	False	NA	-5	True	AATAAA	-18	NA	2877174	2857679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2865354_2865400_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_29786.known	chr12	-	3370	8	FSM	ENSG00000111206.13	ENST00000361953.7	3370	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_6	47.8014601433548	1581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGCTCTGTGGTTTAT	-2871976	True	NA	-8	True	AATAAA	-15	NA	2877040	2857682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2859664_2864319_2864496_2864682_2864753_2866392_2866522_2868562_2868755_2872095_2872248_2873976_2874526_2876919
transcript_29788.known	chr12	+	587	4	FSM	ENSG00000111203.13	ENST00000541659.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_3	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAATTGCTGCCCTCCT	2810993	True	NA	NA	False	AATAAA	-4	NA	2812760	2818458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2812857_2817222_2817319_2817908_2817951_2818105
transcript_29795.known	chr12	+	583	3	FSM	ENSG00000171792.11	ENST00000538636.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	203	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCCCCAAAGCTGTGGGA	2871377	True	NA	NA	False	NA	NA	NA	2877198	2888137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2885262_2885535_2887910
transcript_29799.known	chr12	+	1605	2	FSM	ENSG00000171792.11	ENST00000464682.2	1605	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGACTTCCCCAGTCAA	2871386	True	NA	-9	True	NA	NA	NA	2877207	2889440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2887910
transcript_29803.known	chr12	-	442	2	FSM	ENSG00000258325.2	ENST00000547794.2	442	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGGTTGCAAGGATTCAG	-2812700	False	NA	-14	True	ATTAAA	-18	NA	2812816	2805130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2805318_2812561
transcript_29804.known	chr12	-	347	2	FSM	ENSG00000258325.2	ENST00000552469.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGATGGTTGCAAGGATT	-2812265	False	NA	-17	True	ATTAAA	-15	NA	2812381	2805133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_2805318_2812218
transcript_29805.known	chr12	+	1008	1	FSM	ENSG00000171792.11	ENST00000623153.1	1008	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACTAATGGTCTTTGTTT	2887987	False	NA	11	True	AATACA	-15	NA	2888000	2889008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2888000_2889000
transcript_29806.known	chr12	+	1926	3	FSM	ENSG00000171792.11	ENST00000489288.7	1926	3	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	32.5	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTGGACCTACTGTGT	2871401	True	NA	6	True	ATTAAA	-20	NA	2877222	2889524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2877283_2885282_2885535_2887910
transcript_29807.known	chr12	+	3080	11	FSM	ENSG00000078246.17	ENST00000448120.7	3080	11	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_8	13.7477270848675	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCACTGCCTTTGCAAG	2887371	True	NA	101	True	AATAAA	-19	NA	2890890	2941138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310
transcript_29808.known	chr12	+	1951	12	FSM	ENSG00000078246.17	ENST00000397132.6	1951	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_11	35.2968521060312	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAAAAATGTGTCACTGCC	2887387	True	NA	93	True	AATAAA	-11	NA	2890906	2941130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2890989_2909528_2909581_2920762_2920923_2922261_2922403_2930247_2930346_2931036_2931241_2933417_2933531_2934446_2934562_2937630_2937730_2938113_2938286_2939310_2939425_2940529
transcript_29809.known	chr12	+	1710	13	FSM	ENSG00000197905.10	ENST00000359864.8	1710	13	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	41.047651847849	935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTCTGGCTGTGTGAGC	2953886	True	NA	25	True	AATAAA	-28	NA	2959396	3040676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_29814.known	chr12	+	1637	12	FSM	ENSG00000197905.10	ENST00000358409.7	1637	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	92.1415547714628	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953819	True	NA	14	True	AATAAA	-17	NA	2959329	3040665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2959482_2959947_2960041_2994737_2994993_3011003_3011069_3012169_3012233_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_29816.nic	chr12	+	1534	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	91.7362370608401	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953796	True	NA	14	True	AATAAA	-17	NA	2959306	3040665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_2959482_2959947_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_29817.nnic	chr12	+	1677	12	NIC	ENSG00000197905.10	novel	1710	13	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	89.6765537781234	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGAGGACCTGGTCTG	2953815	True	NA	14	True	AATAAA	-17	NA	2959325	3040665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_2959482_2994737_2994993_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_2982.known	chr1	-	2941	4	FSM	ENSG00000117616.18	ENST00000498238.1	2941	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	6.37704215656966	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTTATTGTATATATATA	-25243914	True	NA	-24	True	AATAAA	-20	NA	25247454	25242248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25245302_25246443_25247030_25247308
transcript_29820.known	chr12	+	1396	11	FSM	ENSG00000197905.10	ENST00000397122.6	1396	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	94.8261567290376	735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGACCTGGTCTGGCTGTG	2959230	True	NA	20	True	AATAAA	-23	NA	2959916	3040671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_2960041_3011003_3011069_3012169_3012233_3017397_3017527_3018544_3018589_3019114_3019171_3020633_3020774_3021843_3022018_3037967_3038109_3040106_3040260_3040364
transcript_29824.known	chr12	+	4322	9	FSM	ENSG00000011105.14	ENST00000011898.10	4322	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	5.1234753829798	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGCTGTCTCTCAGTG	3073724	True	NA	13	True	AATAAA	-23	NA	3077378	3286559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_3077454_3083652_3083720_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_29826.known	chr12	+	4284	8	FSM	ENSG00000011105.14	ENST00000537971.5	4284	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	11.3101002359368	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGTCTCTCAGTGGTGTG	3073700	True	NA	18	True	AATAAA	-28	NA	3077354	3286564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_3077454_3201176_3201257_3278420_3278613_3278991_3279067_3280381_3280484_3281197_3281330_3281733_3281818_3283044
transcript_29828.known	chr12	-	255	1	FSM	ENSG00000227081.5	ENST00000495392.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1847	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	-3211907	False	NA	NA	False	NA	NA	NA	3211917	3211662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3211700_3211900
transcript_29830.nic	chr12	-	739	2	FSM	ENSG00000250770.4	ENST00000686448.1	680	2	-65	6	-16	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTAGATTCTATTAGTTC	-3366078	False	NA	-1	True	AATAAA	-15	NA	3366177	3331772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3332393_3366058
transcript_29831.nnic	chr12	-	322	2	NNC	ENSG00000250770.4	novel	2959	6	NA	NA	-14	-14012	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTAGACTGTTTTTTTT	-3366076	True	NA	2	True	ATTAAA	-25	NA	3366175	3345778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_3345984_3366058
transcript_29835.known	chr12	+	2399	10	FSM	ENSG00000111218.12	ENST00000382622.4	2399	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	2.55796987404919	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGGATGGCTGGTTCC	3491096	True	NA	NA	False	AATAAA	-17	NA	3491202	3593973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_3491701_3540605_3540792_3549935_3550092_3553650_3553715_3568705_3568849_3569476_3569565_3576870_3576987_3583057_3583209_3592230_3592353_3593098
transcript_29847.nic	chr12	-	1502	9	NIC	ENSG00000111224.14	novel	1197	9	NA	NA	0	156	combination_of_known_junctions	FALSE	canonical	3	43	junction_5	17.5695048308141	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTGGTTTTTGTTGTTTTG	-3872059	True	NA	NA	False	TATAAA	-19	NA	3873436	3811966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3863835_3863958_3873211
transcript_29850.known	chr12	-	4449	8	FSM	ENSG00000111224.14	ENST00000228820.9	4449	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	21.263171188221	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3872022	True	NA	-22	True	ATTAAA	-18	NA	3873399	3808860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3828909_3829031_3829889_3830019_3873211
transcript_29851.known	chr12	-	4406	8	FSM	ENSG00000111224.14	ENST00000427057.6	4406	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	19.5301964001536	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3871978	True	NA	-22	True	ATTAAA	-18	NA	3873355	3808860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3863835_3863958_3873211
transcript_29854.known	chr12	-	4299	7	FSM	ENSG00000111224.14	ENST00000458162.6	4299	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	23.7814119756493	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTGTCTGTGTATATC	-3871993	True	NA	-22	True	ATTAAA	-18	NA	3873370	3808860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_3812440_3814036_3814189_3821872_3822004_3822084_3822158_3826157_3826234_3829889_3830019_3873211
transcript_29861.nnic	chr12	+	1029	4	NNC	ENSG00000256969.2	novel	542	2	NA	NA	-2294	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	11.4697670227235	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCACGCCTAGATTGT	NA	False	NA	37	True	AATAAA	-18	NA	4018682	4026657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_4018830_4018981_4019140_4020793_4021082_4026221
transcript_29864.nnic	chr12	+	742	3	NNC	ENSG00000256969.2	novel	903	4	NA	NA	-2294	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	3	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	NA	False	NA	38	True	AATAAA	-19	NA	4018682	4026658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_4018830_4018981_4019140_4026221
transcript_29866.nnic	chr12	+	977	3	NNC	ENSG00000256969.2	novel	1003	5	NA	NA	-2090	0	at_least_one_novel_splicesite	FALSE	canonical	3	32	junction_1	6	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCACGCCTAGATTGT	4017665	True	NA	37	True	AATAAA	-18	NA	4018886	4026657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_4019140_4020793_4021082_4026221
transcript_29867.nic	chr12	+	791	3	ISM	ENSG00000256969.2	ENST00000654858.1	1003	5	5984	0	-2090	0	3prime_fragment	FALSE	canonical	2	12	junction_1	16	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCCCACGCCTAGATTGT	4017665	True	NA	37	True	AATAAA	-18	NA	4018886	4026657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_4019140_4020979_4021082_4026221
transcript_29871.nic	chr12	+	751	2	ISM	ENSG00000256969.2	ENST00000669712.1	903	4	5924	0	-2151	0	3prime_fragment	FALSE	canonical	3	22	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	NA	False	NA	38	True	AATAAA	-19	NA	4018825	4026658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_4019140_4026221
transcript_29872.known	chr12	+	438	2	FSM	ENSG00000256969.2	ENST00000536141.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGCCCGAAGTTAAAGCT	4025964	False	NA	-7	True	NA	NA	NA	4025984	4026613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4026031_4026221
transcript_29873.nnic	chr12	+	694	2	NNC	ENSG00000256969.2	novel	438	2	NA	NA	-243	-3	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTGCCCACGCCTAGAT	4025608	True	NA	34	True	AATAAA	-15	NA	4025741	4026654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_4026003_4026221
transcript_29874.known	chr12	+	542	2	FSM	ENSG00000256969.2	ENST00000543206.1	542	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCCCACGCCTAGATTGTA	4020946	True	NA	38	True	AATAAA	-19	NA	4020976	4026658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4021082_4026221
transcript_29876.nic	chr12	+	1024	2	ISM	ENSG00000118971.9	ENST00000536537.2	1062	4	27	21387	27	-8895	5prime_fragment	FALSE	canonical	3	1039	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGAGAACGTGTTCAC	4259082	True	NA	7	True	ATTAAA	-18	NA	4273788	4276581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_4274236_4276004
transcript_29877.known	chr12	+	6135	5	FSM	ENSG00000118971.9	ENST00000675468.1	6135	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	436.207805982424	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTATCTGGCCGTTTTTG	4275461	False	NA	13	True	AATAAA	-14	NA	4275548	4305350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4275668_4276004_4276221_4278759_4278920_4288841_4288991_4299859
transcript_29879.known	chr12	-	1374	2	FSM	ENSG00000255920.4	ENST00000656828.1	1374	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATACACATATGTCCACAGT	-4275431	False	25	NA	False	NA	NA	NA	4275456	4247980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4249194_4275295
transcript_29880.known	chr12	-	621	2	FSM	ENSG00000255920.4	ENST00000663068.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTATTTATTTATTTTT	-4276227	True	NA	-6	True	AATAAA	-15	NA	4276252	4248766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4249194_4276058
transcript_29888.known	chr12	+	8209	6	FSM	ENSG00000078237.7	ENST00000179259.6	8209	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_5	12.0266371026983	1040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCATCTTTTTATTTT	4318341	True	NA	NA	False	ATTAAA	-19	NA	4321212	4360028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4321304_4331279_4331318_4337038_4337161_4349818_4349897_4351266_4351378_4352259
transcript_29893.known	chr12	-	3002	3	FSM	ENSG00000118972.3	ENST00000237837.2	3002	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	1	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTAACCCTAAAGTGTT	NA	False	NA	NA	False	NA	NA	NA	4379712	4368226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4370784_4372593_4372698_4379371
transcript_29894.known	chr12	-	2168	14	FSM	ENSG00000047621.12	ENST00000545746.5	2168	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	20.0056205120213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTTTTACTTTCTTTG	-4537574	True	NA	-63	True	ATTAAA	-14	NA	4538508	4489414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4517060_4517190_4518057_4518256_4518773_4518881_4525253_4525376_4525483_4525584_4529868_4530051_4534156_4534303_4536016_4536212_4538408
transcript_29906.nnic	chr12	-	890	6	NNC	ENSG00000047621.12	novel	727	7	NA	NA	-52	-172	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_5	27.6723688902848	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTTTTCTTCTCTGTGT	-4509288	True	NA	-2	True	NA	NA	NA	4509402	4489586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_4489900_4490521_4490590_4491176_4491235_4500137_4500341_4505305_4505381_4509229
transcript_29909.known	chr12	+	2163	10	FSM	ENSG00000111247.15	ENST00000228843.13	2163	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	151.242263346666	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532873	True	NA	19	True	ATTAAA	-16	NA	4538889	4560047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4545781_4545833_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_29918.known	chr12	+	2112	9	FSM	ENSG00000111247.15	ENST00000352618.9	2112	9	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_7	50.6802168010359	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532873	True	NA	19	True	ATTAAA	-16	NA	4538889	4560047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4556352_4556503_4558856
transcript_29926.known	chr12	+	787	8	FSM	ENSG00000111247.15	ENST00000544927.5	787	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_7	145.875541025176	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAAATGCCACTAGCACC	4532913	True	NA	NA	False	NA	NA	NA	4538929	4558970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553090_4558856
transcript_29927.nic	chr12	+	2077	8	NIC	ENSG00000111247.15	novel	2112	9	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_7	144.189076548532	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGTTGTACACTTCTTT	4532758	True	NA	19	True	ATTAAA	-16	NA	4538774	4560047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_4538957_4541883_4541934_4543762_4543905_4546308_4546419_4548091_4548179_4548686_4548837_4552982_4553148_4558856
transcript_29939.nnic	chr12	+	1962	15	NIC	ENSG00000255639.3	novel	3317	15	NA	NA	-10	76928	combination_of_known_splicesites	FALSE	canonical	3	16	junction_10	506.960233718019	135	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGTGCATTATGCCAT	4634938	True	NA	27	True	AATAAA	-18	NA	4649090	4851112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4760957_4761144_4763252_4763391_4763951_4764048_4765378_4765547_4850737
transcript_2994.known	chr1	-	970	2	FSM	ENSG00000117616.18	ENST00000450820.2	970	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATGGTGAAACCCCTTC	-25267679	True	NA	NA	False	NA	NA	NA	25267885	25253113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25253938_25267739
transcript_29956.known	chr12	+	8356	11	FSM	ENSG00000139180.11	ENST00000266544.10	8356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_1	39.8968670449197	4823	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTTGAGAGCTGCAATT	4634961	True	NA	NA	False	AATAAA	-28	NA	4649113	4694317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4649176_4654291_4654463_4654824_4654923_4657747_4657840_4659035_4659178_4662532_4662636_4668456_4668525_4669740_4669818_4682204_4682301_4685258_4685326_4686937
transcript_2996.known	chr1	+	485	1	FSM	ENSG00000272432.1	ENST00000607698.1	485	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTGAAAATTGTGGGT	25247774	False	NA	-6	True	AATAAA	-10	NA	25247836	25248321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25247800_25248300
transcript_2997.known	chr1	-	824	5	FSM	ENSG00000117616.18	ENST00000566395.5	824	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	44.1474801092882	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTAGTCTTTATTGTATA	-25242995	False	NA	-30	True	AATAAA	-14	NA	25246535	25242254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242706_25243549_25243634_25244453_25244499_25245149_25245302_25246443
transcript_29974.known	chr12	+	855	4	FSM	ENSG00000010219.14	ENST00000545571.5	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	21.483844059096	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAACATGGCCAATTGGC	4604106	True	NA	19	True	CATAAA	-20	NA	4604896	4613873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_4605087_4610154_4610285_4612542_4612719_4613514
transcript_29975.known	chr12	-	1249	4	FSM	ENSG00000255474.1	ENST00000527518.1	1249	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCAAACTGTTGATTCTCC	-4719999	True	NA	NA	False	AATAAA	-38	NA	4720102	4700416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_4701180_4703312_4703441_4704177_4704298_4719864
transcript_29979.nnic	chr12	+	814	4	NNC	ENSG00000130035.9	novel	283	3	NA	NA	-281	109	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	16.391054470859	113	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGTGCATTATGCCAT	NA	False	NA	27	True	AATAAA	-18	NA	4763686	4851112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_4763862_4763951_4764048_4765378_4765547_4850737
transcript_2998.known	chr1	-	629	2	FSM	ENSG00000117616.18	ENST00000568701.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTACGCGATCGCGCGGGG	NA	False	NA	NA	False	NA	NA	NA	25267915	25246576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25247030_25267739
transcript_29984.known	chr12	+	992	5	FSM	ENSG00000256417.1	ENST00000537192.1	992	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.48746859276655	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCAGACCAGGCCAACTCA	5290398	True	NA	NA	False	NA	NA	NA	5290479	5378354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_5290625_5292104_5292179_5367802_5367935_5371535_5371599_5377776
transcript_29989.known	chr12	+	1341	2	FSM	ENSG00000185652.12	ENST00000423158.4	1341	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGATGTCAGAGTTGTGTA	5431994	True	NA	20	True	AGTAAA	-14	NA	5432107	5495299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_5432343_5494193
transcript_2999.known	chr1	-	395	3	FSM	ENSG00000117616.18	ENST00000564223.5	395	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	42	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTTTTGTATATTTAAT	-25240114	False	NA	-66	True	AATGAA	-30	NA	25243654	25242290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25242414_25242538_25242706_25243549
transcript_29991.nnic	chr12	-	814	6	NNC	ENSG00000110799.14	novel	8830	52	NA	NA	3106	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	2.75680975041804	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGCTGGTGCACTGTGTC	NA	False	NA	4	True	AATAAA	-24	NA	5965108	5948876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_5949204_5949785_5949884_5951843_5951884_5952390_5952520_5953495_5953595_5964987
transcript_29993.known	chr12	+	1566	9	FSM	ENSG00000010278.15	ENST00000382518.6	1566	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	940.073725499761	2036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTGTTTAATTATT	NA	False	NA	20	True	AATAAA	-27	NA	6199714	6238271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200073_6200421_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29994.known	chr12	+	1432	9	FSM	ENSG00000010278.15	ENST00000538834.6	1432	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	939.094477408956	7460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGACTGGTTTTTGTTT	6199532	True	NA	8	True	AATAAA	-15	NA	6199874	6238259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200073_6200383_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_29997.known	chr12	+	1182	9	FSM	ENSG00000010278.15	ENST00000382519.9	1182	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1195.72457112832	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGATATTGTACATAAAAGA	6189009	True	NA	103	True	AATGAA	-28	NA	6200384	6238139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6232936_6233006_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_3.known	ERCC-00003	+	1007	1	FSM	ERCC-00003A	DQ516784	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2298	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AAAAAG	-30	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00003_+_0_1000
transcript_30.known	ERCC-00069	+	1121	1	FSM	ERCC-00069A	DQ459421	1121	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00069_+_0_1100
transcript_30000.known	chr12	+	1272	8	FSM	ENSG00000010278.15	ENST00000642746.1	1272	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1000.91582552976	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	6199498	True	NA	-4	True	AATAAA	-3	NA	6199840	6238247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200073_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_30002.known	chr12	+	1225	8	FSM	ENSG00000010278.15	ENST00000009180.10	1225	8	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_1	161.502637875721	5940	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTTTGTTTTGTTTAA	6189024	True	NA	15	True	AATAAA	-22	NA	6200399	6238266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200566_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_30008.known	chr12	+	1195	8	FSM	ENSG00000010278.15	ENST00000382515.7	1195	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1007.17872276565	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAATTTGATACATAATAAA	6200767	False	NA	-26	True	NA	NA	NA	6200796	6238225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_30014.known	chr12	+	1360	9	FSM	ENSG00000010278.15	ENST00000610354.5	1360	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1243.52462153952	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATGACAATGTCCTGGAC	6188951	True	NA	-4	True	AATAAA	-3	NA	6200326	6238247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6200566_6200892_6200974_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_30015.known	chr12	+	1164	8	FSM	ENSG00000010278.15	ENST00000676788.1	1164	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1006.8307723156	1702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGGTTTTTGTTTTGTTTA	6224201	False	NA	14	True	AATAAA	-21	NA	6224263	6238265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6224370_6225425_6225535_6232631_6232730_6233411_6233487_6235228_6235328_6235475_6235566_6236191_6236276_6237762
transcript_30016.known	chr12	-	1339	6	FSM	ENSG00000067182.8	ENST00000366159.8	1339	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.6703481069937	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCGAGGCTTGGGGGTTA	-6341836	False	NA	NA	False	NA	NA	NA	6341848	6331239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6331994_6333068_6333148_6333366_6333517_6333736_6333866_6334090_6334245_6341775
transcript_30017.known	chr12	-	3149	13	FSM	ENSG00000111319.13	ENST00000228916.7	3149	13	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_12	67.8955488640865	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTCTGGAGAGCTGGA	-6365587	True	NA	-2	True	AATAAA	-16	NA	6375563	6346846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6348254_6348726_6348803_6348949_6349006_6349163_6349222_6349326_6349406_6354437_6354556_6354749_6354849_6355271_6355436_6355776_6355881_6362050_6362242_6363442_6363711_6374367_6374838_6375504
transcript_30019.known	chr12	-	377	1	FSM	ENSG00000213942.3	ENST00000498412.1	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	253	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGCTGATAGTCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	6410013	6409636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6409600_6410000
transcript_30020.known	chr12	+	1781	7	FSM	ENSG00000139192.12	ENST00000266556.8	1781	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5723301886761	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTTGTTATTACT	6452005	True	NA	23	True	AATACA	-37	NA	6452041	6462316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6452313_6453066_6453298_6453446_6453717_6457405_6457745_6458644_6458948_6460854_6460939_6462033
transcript_30025.nnic	chr12	-	1121	6	Fusion	ENSG00000139190.17_ENSG00000215039.8	novel	3139	4	NA	NA	-2	0	multi-exon	FALSE	canonical	0	0	junction_2	18.6161220451522	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6469893	True	NA	NA	False	ATTAAA	-28	NA	6470679	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_6448151_6448639_6448738_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_30026.nnic	chr12	-	1415	6	Fusion	ENSG00000139190.17_ENSG00000215039.8	novel	3139	4	NA	NA	-276	0	multi-exon	FALSE	canonical	3	14	junction_2	13.5292276202302	62	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-28	NA	6470953	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_6448151_6448639_6448758_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_30030.known	chr12	-	865	5	FSM	ENSG00000215039.8	ENST00000536388.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.6195461813654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCATTAGGAGATATACCT	-6451144	True	NA	NA	False	NA	NA	NA	6451534	6447772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6448151_6448639_6448738_6450473_6450709_6450892_6450981_6451468
transcript_30032.known	chr12	-	1068	5	FSM	ENSG00000139190.17	ENST00000400911.7	1068	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	18.8148877222268	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469867	True	NA	NA	False	ATTAAA	-1	NA	6470653	6462236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6462843_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_30033.known	chr12	-	747	5	FSM	ENSG00000139190.17	ENST00000535180.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.2142525225417	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTCCCAGCCCTATC	-6469859	True	NA	NA	False	NA	NA	NA	6470645	6462676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6462970_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_30037.nnic	chr12	-	871	4	NIC	ENSG00000215039.8	novel	865	5	NA	NA	-50	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	17.6823829464998	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-28	NA	6451618	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6448151_6448639_6448738_6450892_6450981_6451468
transcript_30040.known	chr12	-	3139	4	FSM	ENSG00000139190.17	ENST00000361716.8	3139	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	8.48528137423857	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6464942_6465841_6466001_6466224_6466352_6470529
transcript_30042.nnic	chr12	-	706	3	NNC	ENSG00000215039.8	novel	700	3	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	20.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6450792	False	NA	NA	False	ATTAAA	-28	NA	6451182	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_6448151_6448639_6448738_6451109
transcript_30043.nnic	chr12	-	734	3	NIC	ENSG00000215039.8	novel	700	3	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	21	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6451073	True	NA	NA	False	ATTAAA	-28	NA	6451463	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6448151_6448639_6448738_6451362
transcript_30045.nnic	chr12	-	925	3	NIC	ENSG00000215039.8	novel	700	3	NA	NA	-192	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_2	17.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	NA	False	NA	NA	False	ATTAAA	-28	NA	6451760	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6448151_6448639_6448738_6451468
transcript_30046.known	chr12	-	700	3	FSM	ENSG00000215039.8	ENST00000504270.2	700	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	21.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGCTATTGTTTTAGT	-6451125	True	NA	NA	False	ATTAAA	-28	NA	6451515	6447615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6448151_6448639_6448758_6451468
transcript_30049.known	chr12	-	1132	6	FSM	ENSG00000215039.8	ENST00000669354.1	1132	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	16.9304459480546	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTATTTATTGATTGAT	-6451157	True	NA	64	True	AATAAA	-33	NA	6451547	6439157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6439677_6443542_6443718_6446960_6447088_6448036_6448151_6448639_6448758_6451468
transcript_3005.known	chr1	+	965	5	FSM	ENSG00000183726.11	ENST00000491936.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	479.654302597193	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCACCATGGTCCAGCCAC	25325897	True	NA	NA	False	NA	NA	NA	25338319	25361265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25338457_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_30050.known	chr12	-	2736	5	FSM	ENSG00000139190.17	ENST00000396308.4	2736	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.017180121086	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTTGGTTGTTGTTTGG	-6469891	True	NA	NA	False	ATTAAA	-1	NA	6470677	6462236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6464487_6464889_6464942_6465841_6466001_6466224_6466352_6470529
transcript_30061.known	chr12	-	343	3	FSM	ENSG00000111639.8	ENST00000540949.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1400.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTCGATAGAAGAGAAAGC	-6480910	True	NA	-161	True	AATAAA	-42	NA	6493295	6492280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493250
transcript_30063.known	chr12	-	601	3	FSM	ENSG00000111639.8	ENST00000537701.5	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1426	3540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTAGACTATGAAGTCTTG	-6490614	True	NA	17	True	NA	NA	NA	6493841	6492102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493716
transcript_30064.known	chr12	-	441	2	FSM	ENSG00000111639.8	ENST00000543703.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGATAGCCACATACTTT	-6490613	True	NA	-31	True	AATAAA	-17	NA	6493840	6492150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6493716
transcript_30065.known	chr12	-	898	3	FSM	ENSG00000111639.8	ENST00000229238.5	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	2501	junction_2	175.5	9336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGTACTACTCTCATAA	-6480877	True	NA	0	True	AATATA	-20	NA	6493262	6491885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493057
transcript_30066.known	chr12	-	814	3	FSM	ENSG00000111639.8	ENST00000543164.5	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_2	1313	3143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCCACATACTTTTGTT	-6490613	True	NA	-27	True	AATAAA	-21	NA	6493840	6492146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493458
transcript_30067.known	chr12	-	472	3	FSM	ENSG00000111639.8	ENST00000543959.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	1370	683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTGATAGCCACATACTT	-6493695	False	NA	-32	True	AATAAA	-16	NA	6493718	6492151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6492468_6492861_6492973_6493673
transcript_30068.known	chr12	+	4825	32	FSM	ENSG00000010292.13	ENST00000315579.10	4825	32	0	0	0	0	multi-exon	TRUE	canonical	3	407	junction_6	97.4228796627866	99	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTTTTTCCTAAGCTTG	6486889	True	NA	34	True	AATAAA	-19	NA	6494101	6531955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6494155_6495075_6495226_6509716_6509793_6510074_6510134_6510628_6510811_6511109_6511253_6514264_6514393_6514463_6514588_6514772_6514921_6516827_6517026_6517364_6517500_6517595_6517684_6517778_6517960_6520985_6521111_6521797_6522038_6522827_6523003_6523261_6523347_6525582_6525717_6526067_6526201_6526286_6526372_6526447_6526616_6526890_6527064_6527776_6527889_6527967_6528092_6528172_6528329_6528678_6528857_6528944_6529040_6529512_6529594_6529774_6529959_6530690_6530818_6530920_6531077_6531326
transcript_3008.known	chr1	+	2266	7	FSM	ENSG00000183726.11	ENST00000374358.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	982	junction_5	63.935948851609	1510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGTCTTTAATTTTT	25325911	True	NA	23	True	ATTAAA	-17	NA	25338333	25362361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25338457_25340473_25340580_25342960_25343074_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_30087.known	chr12	+	1348	9	FSM	ENSG00000111640.15	ENST00000396861.5	1348	9	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_1	8558.92833537003	2688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCAACCAGTTACTTG	5989553	False	NA	19	True	AATAAA	-7	NA	6534533	6538359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534662_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_3009.known	chr1	+	776	6	FSM	ENSG00000183726.11	ENST00000498135.5	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	434.043315810761	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAATAAAAAGAAATTACA	25325894	True	NA	-22	True	NA	NA	NA	25338316	25360967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25338457_25340473_25340580_25351625_25351694_25352881_25352975_25356792_25356854_25360659
transcript_30094.known	chr12	+	1292	8	FSM	ENSG00000111640.15	ENST00000396858.5	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	8918.08294353417	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAGGGAGCCGCACCTTG	6535167	False	NA	-25	True	NA	NA	NA	6535301	6538315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6535470_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_3010.known	chr1	+	3940	11	FSM	ENSG00000204178.11	ENST00000374343.5	3940	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	6.78896162899747	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTTCTGCCTTTTTAA	25429755	True	NA	NA	False	AATAAA	-20	NA	25430896	25500209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25431179_25446761_25446904_25448807_25448935_25454258_25454383_25456652_25456832_25458390_25458893_25484115_25484275_25485612_25485796_25489172_25489294_25491409_25491585_25498263
transcript_30108.known	chr12	+	1285	9	FSM	ENSG00000111640.15	ENST00000229239.10	1285	9	0	0	0	0	multi-exon	FALSE	canonical	3	21253	junction_1	1792.38254496634	129602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTTGTCCTGTCTTATT	5989536	True	NA	31	True	AATAAA	-19	NA	6534516	6538371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_30109.known	chr12	+	1256	8	FSM	ENSG00000111640.15	ENST00000396859.5	1256	8	0	0	0	0	multi-exon	FALSE	canonical	3	24885	junction_4	849.448392445693	1206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCATCAATAAAGTACCC	6534251	False	NA	-1	True	NA	NA	NA	6534753	6538339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534862_6536493_6536594_6536683_6536791_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_30110.known	chr12	+	1266	9	FSM	ENSG00000111640.15	ENST00000396856.5	1266	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	8629.17694148753	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCATCAATAAAGTACCCT	5989551	False	NA	0	True	NA	NA	NA	6534531	6538340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6536818_6536919_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_30111.known	chr12	+	1333	8	FSM	ENSG00000111640.15	ENST00000474249.5	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	21253	junction_1	1915.130186868	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAGGGAGCCGCACCTT	5989560	False	NA	-26	True	NA	NA	NA	6534540	6538314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534570_6534809_6534862_6536493_6536594_6536683_6537011_6537100_6537217_6537308_6537391_6537583_6537997_6538100
transcript_30112.known	chr12	+	1720	4	FSM	ENSG00000111640.15	ENST00000466525.1	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	25516	junction_1	511.04859521054	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGTACCATCAATAAAGTAC	6534222	False	NA	-3	True	NA	NA	NA	6534791	6538337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6534862_6536493_6536594_6536683_6537997_6538100
transcript_30119.known	chr12	-	3038	16	FSM	ENSG00000111641.12	ENST00000541778.5	3038	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	121.132874701021	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6568663	False	NA	-2	True	AATACA	-17	NA	6568691	6556870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_30120.nic	chr12	-	2759	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	0	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	111.47368398964	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558544	True	NA	-2	True	AATACA	-17	NA	6568332	6556870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_30121.nic	chr12	-	2707	16	NIC	ENSG00000111641.12	novel	2791	17	NA	NA	-16	0	combination_of_known_junctions	FALSE	non_canonical	1	93	junction_9	91.9681104151506	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558560	True	NA	-2	True	AATACA	-17	NA	6568348	6556870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_3014.known	chr1	+	483	2	FSM	ENSG00000225643.1	ENST00000412797.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCCTCCACACTTGTCTC	NA	False	NA	NA	False	AAGAAA	-12	NA	25581477	25590356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25581773_25590168
transcript_30140.known	chr12	-	1002	6	FSM	ENSG00000111641.12	ENST00000542015.1	1002	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	167.767696533033	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCACCCTGAAACCTAAGGA	-6558493	True	NA	NA	False	NA	NA	NA	6568281	6557220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560744_6567815_6567923_6568206
transcript_30144.known	chr12	-	657	5	FSM	ENSG00000111641.12	ENST00000545492.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	120.017707026922	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCATCTTTTTGGGCAT	-6558526	True	NA	NA	False	NA	NA	NA	6568314	6566097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_30147.known	chr12	-	630	4	FSM	ENSG00000111641.12	ENST00000545915.5	630	4	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_3	25.3026129524645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCAGCACCTGGCAGTGA	-6558537	True	NA	NA	False	NA	NA	NA	6568325	6566259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6566618_6566776_6566823_6567815_6567923_6568206
transcript_30152.known	chr12	-	508	2	FSM	ENSG00000111641.12	ENST00000546053.1	508	2	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCAAGAGGAAGTAGTG	-6558503	True	NA	NA	False	NA	NA	NA	6568291	6567499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6567923_6568206
transcript_30153.known	chr12	-	2650	16	FSM	ENSG00000111641.12	ENST00000322166.10	2650	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	112.270625425056	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558503	True	NA	-2	True	AATACA	-17	NA	6568291	6556870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_30154.known	chr12	-	2791	17	FSM	ENSG00000111641.12	ENST00000620535.4	2791	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_12	154.576121518655	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTATTTTTGAGGG	-6558544	True	NA	-1	True	AATACA	-18	NA	6568332	6556869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563513_6563611_6563772_6563890_6563947_6564149_6564249_6566100_6566337_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_30155.known	chr12	-	2701	16	FSM	ENSG00000111641.12	ENST00000399466.6	2701	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	135.092495062539	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558498	True	NA	-2	True	AATACA	-17	NA	6568286	6556870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568138
transcript_30156.known	chr12	-	2751	17	FSM	ENSG00000111641.12	ENST00000545200.5	2751	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	165.014002720224	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGAGTATTTTTGAGG	-6558494	True	NA	-2	True	AATACA	-17	NA	6568282	6556870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6557643_6558015_6558138_6560097_6560327_6560446_6560570_6560697_6560788_6560930_6561071_6561663_6561805_6561883_6561972_6563080_6563171_6563314_6563515_6563613_6563772_6563890_6563947_6566100_6566325_6566528_6566618_6566776_6566823_6567815_6567923_6568206
transcript_30157.known	chr12	-	2683	2	FSM	ENSG00000184574.10	ENST00000329858.9	2683	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGGCTCAGGGTTTTCC	-6635930	True	NA	NA	False	AATAAA	-20	NA	6635959	6618834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6621465_6635906
transcript_30158.known	chr12	-	1053	5	FSM	ENSG00000111644.8	ENST00000536350.5	1053	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	3.89711431702997	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTCCAGATCCACTCAGA	-6647229	False	NA	NA	False	NA	NA	NA	6647393	6644054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6644606_6645219_6645338_6646482_6646578_6646793_6647013_6647323
transcript_3016.known	chr1	+	1217	7	FSM	ENSG00000117640.18	ENST00000524618.5	1217	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	107.8867719211	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGGCTTGTGATTTGAC	25815636	True	NA	-70	True	NA	NA	NA	25819985	25832211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823620_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_30167.known	chr12	-	678	7	FSM	ENSG00000111653.20	ENST00000444704.5	678	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	58.4249280891489	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGGGCCTTGGATTCCAA	-6659833	True	NA	NA	False	AAGAAA	-4	NA	6663101	6651194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6653229_6653397_6663064
transcript_30173.known	chr12	-	1348	8	FSM	ENSG00000111653.20	ENST00000446105.6	1348	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	53.5879974377449	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTTGGGTAGGTAAATAA	-6659874	True	NA	-59	True	NA	NA	NA	6663142	6650625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652768_6652944_6653051_6653229_6653397_6656726_6656799_6663064
transcript_30174.known	chr12	-	1280	7	FSM	ENSG00000111653.20	ENST00000619641.4	1280	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	58.4306331378404	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTGCGTCCTCTGGGTTG	-6659874	True	NA	28	True	AGTAAA	-15	NA	6663142	6650538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651235_6651323_6651386_6652270_6652419_6652661_6652771_6652935_6653051_6656726_6656799_6663064
transcript_30175.known	chr12	-	727	7	FSM	ENSG00000111653.20	ENST00000437149.6	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	27.7453699841173	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCAGGAGTTGGAGGG	-6659851	True	NA	NA	False	GGGGCT	-27	NA	6663119	6651321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6651386_6652270_6652419_6652661_6652768_6652935_6653051_6653229_6653397_6656726_6656799_6663064
transcript_30176.known	chr12	-	3008	11	FSM	ENSG00000126746.18	ENST00000396801.7	3008	11	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_10	84.5917253636548	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTTTTTAAATCAT	-6689499	False	NA	77	True	NA	NA	NA	6689510	6666647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_30180.known	chr12	-	2978	11	FSM	ENSG00000126746.18	ENST00000361959.7	2978	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	87.335216264689	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGTTTTGTTTATTTT	-6689281	False	NA	-5	True	TATAAA	-26	NA	6689292	6666729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6672349_6672533_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_30192.known	chr12	-	3266	10	FSM	ENSG00000126746.18	ENST00000319770.7	3266	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_9	69.8872107200039	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAGGCAGTGGAGCTACT	-6689499	False	NA	-2	True	AATAAA	-15	NA	6689510	6666476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678461_6678662_6678711_6678945_6679184_6679454_6679526_6688166_6688227_6689097
transcript_30194.known	chr12	-	2514	9	FSM	ENSG00000126746.18	ENST00000355772.8	2514	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	98.3857205086185	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATATTTGATGTTTTG	-6687779	True	NA	-13	True	TATAAA	-18	NA	6689454	6666737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6668116_6669030_6669190_6670759_6670839_6673215_6673441_6678126_6678344_6678945_6679184_6679454_6679526_6688166_6688227_6689367
transcript_30197.known	chr12	-	2323	6	FSM	ENSG00000139200.14	ENST00000320591.9	2323	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	16.5698521417664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	-6700787	False	NA	-7	True	AATAAA	-14	NA	6700800	6693791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_30198.nnic	chr12	-	1409	6	NNC	ENSG00000139200.14	novel	2711	5	NA	NA	9	1596	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	25.7371327074327	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACTGGAAATCCTCACCT	-6700408	False	NA	-16	True	AATAAA	-18	NA	6700421	6692194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_6692447_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
transcript_30202.known	chr12	-	2711	5	FSM	ENSG00000139200.14	ENST00000534837.6	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	8.10478253872366	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGAGTCCCCTGGTTCTGC	-6700802	False	NA	-6	True	AATAAA	-15	NA	6700815	6693790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700613
transcript_30205.known	chr12	-	2432	6	FSM	ENSG00000139200.14	ENST00000540656.5	2432	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	23.1654915769124	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCGAGTCCCCTGGTTCTG	-6700417	False	NA	-7	True	AATAAA	-14	NA	6700430	6693791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6695058_6695429_6695652_6696442_6696525_6697286_6697793_6698044_6698105_6700134
transcript_30209.known	chr12	+	1831	8	FSM	ENSG00000111652.10	ENST00000543155.6	1831	8	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	71.7831200668417	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCCTGAACTGGGTATCT	6721836	True	NA	40	True	AATAAA	-24	NA	6724045	6731865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_3021.known	chr1	+	1953	7	FSM	ENSG00000117640.18	ENST00000374303.7	1953	7	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	33.0840680019183	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25815604	True	NA	11	True	ATTAAA	-21	NA	25819953	25832938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_30213.known	chr12	+	1721	8	FSM	ENSG00000111652.10	ENST00000229251.7	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	125.749670344843	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATATATCTATATATAATA	6721861	True	NA	11	True	ATTAAA	-18	NA	6724070	6731807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724153_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_30216.known	chr12	+	1832	8	FSM	ENSG00000111652.10	ENST00000539735.5	1832	8	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	128.51204978046	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACGCAGAAATAAATCTATG	6721869	True	NA	3	True	ATTAAA	-39	NA	6724078	6731828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724251_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_30221.known	chr12	+	1707	8	FSM	ENSG00000111652.10	ENST00000534877.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	144.077076877735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATGAGAAATCTATCTAC	6723557	False	NA	17	True	AATAAA	-1	NA	6724297	6731842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724331_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_30225.known	chr12	+	898	7	FSM	ENSG00000111652.10	ENST00000538375.5	898	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	152.254629559243	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTCAGAGAGCCTTCT	6721925	True	NA	NA	False	NA	NA	NA	6724134	6731097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724180_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_30227.known	chr12	+	1768	7	FSM	ENSG00000111652.10	ENST00000626119.2	1768	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	178.476655803124	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGGGTATCTTCTGTGTT	6723988	True	NA	48	True	AATAAA	-32	NA	6724013	6731873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724153_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_3023.known	chr1	+	1868	7	FSM	ENSG00000117640.18	ENST00000374307.9	1868	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	103.113206396336	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25815653	True	NA	11	True	ATTAAA	-21	NA	25820002	25832938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829544_25829831_25831920
transcript_30230.known	chr12	+	1728	7	FSM	ENSG00000111652.10	ENST00000543939.5	1728	7	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	197.455480214317	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGACGCAGAAATAAATC	6721909	True	NA	-1	True	ATTAAA	-35	NA	6724118	6731824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724267_6724613_6724819_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_30242.known	chr12	+	2034	7	FSM	ENSG00000111652.10	ENST00000534947.5	2034	7	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	22.2617010431219	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTATCTTCTGTGTTTG	6723546	True	NA	50	True	AATAAA	-34	NA	6724286	6731875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730668_6730821_6730999
transcript_30243.known	chr12	+	1610	7	FSM	ENSG00000111652.10	ENST00000538410.5	1610	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	169.374748872303	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGAAATAAATCTATGAGAA	6721872	True	NA	7	True	ATTAAA	-43	NA	6724081	6731832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6724180_6724613_6724819_6727925_6728002_6728222_6728312_6729246_6729450_6730401_6730508_6730999
transcript_3025.known	chr1	+	1873	7	FSM	ENSG00000117640.18	ENST00000474295.5	1873	7	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_5	94.2645508956339	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGTGTCCATCTCTTG	25815579	True	NA	15	True	ATTAAA	-25	NA	25819928	25832942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820030_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829617_25829831_25831920
transcript_30252.known	chr12	+	820	5	FSM	ENSG00000159335.18	ENST00000540667.5	820	5	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_1	652.682541516165	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGAGCCCCACAGCTGCCC	6765495	False	NA	-27	True	NA	NA	NA	6765515	6770875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6765639_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_30254.known	chr12	+	1162	5	FSM	ENSG00000159335.18	ENST00000309083.8	1162	5	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_2	173.207065387068	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	6745327	True	NA	30	True	AATAAA	-26	NA	6766362	6770952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6766751_6769602_6769675_6769920_6770000_6770156_6770219_6770391
transcript_30259.known	chr12	+	976	5	FSM	ENSG00000159335.18	ENST00000538057.2	976	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	775.473726182906	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTCTCCTGCTTTCCCGG	6769038	False	NA	30	True	AATAAA	-26	NA	6769052	6770952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6769178_6769602_6769675_6769843_6770000_6770156_6770219_6770391
transcript_30268.known	chr12	-	1555	9	FSM	ENSG00000089693.11	ENST00000203630.10	1555	9	0	0	0	0	multi-exon	FALSE	canonical	3	2813	junction_5	303.317387401382	5143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGTGGGATTCTGGCTGT	-6732693	True	NA	-10	True	AATAAA	-18	NA	6753141	6747995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6748548_6748769_6748983_6749847_6750008_6750176_6750306_6750712_6750767_6751640_6751677_6751924_6752055_6752284_6752363_6752938
transcript_30271.known	chr12	+	1576	5	FSM	ENSG00000089692.9	ENST00000441671.6	1576	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	7.49583217528247	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTCTTGAGTCACAAGA	6772508	False	NA	NA	False	AATAAA	-17	NA	6772518	6775733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6772911_6773191_6773340_6773696_6774002_6774594_6774865_6775272
transcript_30272.known	chr12	+	684	2	FSM	ENSG00000089692.9	ENST00000541049.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCTGGCTCTTTCT	6777431	False	NA	4	True	AATAAA	-18	NA	6777449	6778455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6777922_6778243
transcript_30273.known	chr12	+	3049	10	FSM	ENSG00000010610.10	ENST00000011653.9	3049	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.25388767976457	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	6789516	True	NA	4	True	AATAAA	-17	NA	6789527	6820799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6789663_6800071_6800188_6800306_6800472_6814141_6814301_6814758_6814993_6816055_6816404_6817129_6817331_6818420_6818543_6818846_6818915_6819298
transcript_30274.nnic	chr12	+	1678	3	NNC	ENSG00000010610.10	novel	3049	10	NA	NA	4488	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	6.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAAGATGCTCTTCGTGT	6818268	True	NA	4	True	AATAAA	-17	NA	6818541	6820799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_6818651_6818846_6818915_6819298
transcript_30275.known	chr12	+	2129	14	FSM	ENSG00000110811.20	ENST00000612048.4	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_4	16.274276358902	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	6829795	False	NA	23	True	AATAAA	-18	NA	6829827	6839846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6831215_6831353_6831824_6831915_6833591_6833645_6833741_6833810_6833924_6834050_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_30276.known	chr12	+	3226	16	FSM	ENSG00000110811.20	ENST00000536140.5	3226	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	51.6494164751377	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAGGGGCCAGTCAAGTG	6829009	False	NA	23	True	AATAAA	-18	NA	6829023	6839846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6830012_6830352_6830555_6830638_6830771_6830869_6831034_6831215_6831353_6831824_6831915_6833591_6833645_6833743_6833810_6833924_6834050_6834824_6834956_6836984_6837087_6837422_6837574_6837731_6837850_6837957_6838034_6838999_6839141_6839296
transcript_30281.known	chr12	+	1610	5	FSM	ENSG00000250510.8	ENST00000428545.6	1610	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	6.74536878161602	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821430	False	NA	11	True	ATTAAA	-23	NA	6821703	6827421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6821901_6823467_6823764_6825483_6825674_6826195_6826354_6826652
transcript_30283.known	chr12	+	2495	5	FSM	ENSG00000250510.8	ENST00000311268.8	2495	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	5.1478150704935	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821663	True	NA	11	True	ATTAAA	-23	NA	6821820	6827421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6821901_6823467_6824766_6825483_6825674_6826195_6826354_6826652
transcript_30285.known	chr12	+	1150	4	FSM	ENSG00000250510.8	ENST00000382315.7	1150	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.6144555520604	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTGTCCAGTGTACTG	6821710	True	NA	11	True	ATTAAA	-23	NA	6821867	6827421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6821901_6825483_6825674_6826195_6826354_6826652
transcript_30289.known	chr12	-	1047	6	FSM	ENSG00000111665.12	ENST00000229265.10	1047	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	141.433235132341	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGAGTTTTCTGTGTGT	-6843957	True	NA	-2	True	AAAAAG	-16	NA	6851252	6848815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849784_6850466_6850597_6850832_6851010_6851221
transcript_30290.known	chr12	-	1144	6	FSM	ENSG00000111665.12	ENST00000538862.7	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_5	20.1395134002786	1130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAAACCTTGCACCGAG	-6843991	True	NA	-14	True	ATTAAA	-34	NA	6851286	6848827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_30297.known	chr12	-	985	5	FSM	ENSG00000111665.12	ENST00000540683.1	985	5	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	149.244765402342	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAAAAAGGTATATGT	-6843954	True	NA	-29	True	ATTAAA	-19	NA	6851249	6848842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6850832_6851010_6851221
transcript_30302.known	chr12	-	619	4	FSM	ENSG00000111665.12	ENST00000545368.5	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	168.530907155532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCAGCACTTTCCCTTG	-6843997	True	NA	NA	False	NA	NA	NA	6851292	6849074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849564_6849859_6850466_6850597_6851221
transcript_30307.known	chr12	-	646	3	FSM	ENSG00000111665.12	ENST00000446553.2	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	29	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACACACACATAAC	-6843997	True	NA	NA	False	NA	NA	NA	6851292	6850198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6850597_6850832_6851010_6851221
transcript_30308.known	chr12	-	1327	5	FSM	ENSG00000111665.12	ENST00000535406.5	1327	5	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	17.6546736021938	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTAAACCTTGCACCGA	-6843963	True	NA	-15	True	ATTAAA	-33	NA	6851258	6848828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6849199_6849322_6849430_6849564_6849859_6850466_6850597_6850832
transcript_30312.known	chr12	+	3083	20	FSM	ENSG00000111667.14	ENST00000389231.9	3083	20	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_1	53.4620791385555	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAACGGCTAAATTGTGTCC	6837458	True	NA	4	True	AATAAA	-4	NA	6852147	6866620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863309_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_30313.known	chr12	+	3162	20	FSM	ENSG00000111667.14	ENST00000229268.13	3162	20	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	161.86592037018	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTCCTGTTTGATACCT	6837460	True	NA	16	True	AATAAA	-16	NA	6852149	6866632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6852291_6855400_6855527_6855754_6855822_6856016_6856151_6856304_6856451_6856706_6856892_6857628_6857724_6858423_6858618_6859469_6859542_6860150_6860239_6860365_6860492_6860952_6861107_6861442_6861618_6862469_6862559_6863185_6863378_6863829_6863974_6864049_6864196_6864721_6864876_6865163_6865249_6865983
transcript_30314.known	chr12	+	2294	12	FSM	ENSG00000111674.9	ENST00000229277.6	2294	12	0	0	0	0	multi-exon	TRUE	canonical	3	274	junction_1	64.1246204054945	771	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGTGTCTAAGGAGTCT	6908869	True	NA	22	True	ATTAAA	-16	NA	6914579	6923697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6914660_6915820_6915918_6916416_6916513_6916670_6916730_6917037_6917108_6917580_6917715_6917939_6918163_6919565_6919764_6921580_6921783_6922055_6922165_6922343_6922403_6922730
transcript_3032.known	chr1	+	2099	7	FSM	ENSG00000117640.18	ENST00000374301.7	2099	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	107.287257190943	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATTTGCTGTGTCCATCT	25820112	True	NA	11	True	ATTAAA	-21	NA	25820192	25832938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_25820415_25823018_25823129_25823643_25823749_25826301_25826412_25826614_25826827_25829508_25829831_25831920
transcript_30320.known	chr12	+	1615	8	FSM	ENSG00000010626.15	ENST00000007969.12	1615	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.89481191400338	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	NA	False	NA	23	True	AATAAA	-15	NA	6904732	6914229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_30321.known	chr12	+	1698	8	FSM	ENSG00000010626.15	ENST00000443597.7	1698	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.36957051703084	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	6904643	True	NA	23	True	AATAAA	-15	NA	6904821	6914229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6905076_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_30332.known	chr12	+	791	7	FSM	ENSG00000111669.15	ENST00000488464.6	791	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	5031.48849469242	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCATCCATCTTCCCTAC	6867503	True	NA	NA	False	NA	NA	NA	6868099	6870383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6868256_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_30333.known	chr12	+	1587	7	FSM	ENSG00000111669.15	ENST00000535434.5	1587	7	0	0	0	0	multi-exon	FALSE	canonical	2	192	junction_1	4963.81021886301	2215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAACAACATCTCTTACTAT	6867517	True	NA	17	True	TATAAA	-45	NA	6868113	6870939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6868510_6868863_6868988_6869098_6869184_6869257_6869391_6869687_6869774_6870048_6870137_6870264
transcript_30338.known	chr12	+	1208	7	FSM	ENSG00000010626.15	ENST00000323702.9	1208	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	5.14511634681104	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	6904662	True	NA	22	True	AATAAA	-14	NA	6904840	6914228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6907314_6907446_6909889_6910027_6913890
transcript_30339.known	chr12	+	1412	7	FSM	ENSG00000010626.15	ENST00000451681.5	1412	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	4.04145188432738	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGTTCGGATTTCCAATAA	NA	False	NA	-12	True	NA	NA	NA	6904790	6914194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6909889_6910027_6912729_6913028_6913890
transcript_30352.known	chr12	+	1061	5	FSM	ENSG00000010626.15	ENST00000622489.4	1061	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.96419413859206	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCGGGTTTGTGAGACATTG	NA	False	NA	35	True	AATAAA	-27	NA	6904732	6914241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6905844_6905955_6906408_6906663_6913890
transcript_30353.known	chr12	+	969	5	FSM	ENSG00000010626.15	ENST00000428946.5	969	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	6.26498204307083	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTGTCTGACCGGGTT	6904655	True	NA	23	True	AATAAA	-15	NA	6904833	6914229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6904904_6905584_6905760_6906408_6906663_6907314_6907446_6913890
transcript_30369.known	chr12	+	1438	3	FSM	ENSG00000240370.6	ENST00000412023.5	1438	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTAGGCTCGAGCCGCTG	6873376	False	NA	NA	False	NA	NA	NA	6873388	6884616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6882195_6882328_6883703
transcript_30372.known	chr12	-	1205	3	FSM	ENSG00000111671.10	ENST00000523102.5	1205	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	43	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6871997	True	NA	-5	True	AGTAAA	-27	NA	6873285	6870934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6871320_6872237_6872987_6873214
transcript_30374.known	chr12	-	1203	3	FSM	ENSG00000111671.10	ENST00000524270.6	1203	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	51	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTTCTTGTTTTTTTTTT	-6872015	True	NA	-5	True	AGTAAA	-27	NA	6873303	6870934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6871320_6872237_6872998_6873245
transcript_30379.known	chr12	+	474	2	FSM	ENSG00000010626.15	ENST00000472633.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCTGTGTCTGACCGGGT	6913090	False	NA	22	True	AATAAA	-14	NA	6913101	6914228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6913238_6913890
transcript_30381.known	chr12	+	1105	1	FSM	ENSG00000248593.3	ENST00000602547.1	1105	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCTGTCTTGTCATCT	NA	False	NA	19	True	AATAAA	-31	NA	6884681	6885786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6884700_6885800
transcript_30382.known	chr12	+	845	4	FSM	ENSG00000240370.6	ENST00000421824.1	845	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	5.90668171555645	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTCACTACCCGCCGGCT	6873060	True	NA	NA	False	NA	NA	NA	6873655	6884741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6882195_6882328_6883703_6883920_6884370
transcript_30383.known	chr12	+	587	3	FSM	ENSG00000240370.6	ENST00000451612.5	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGAAATGCCCATCGGC	6873466	False	NA	NA	False	NA	NA	NA	6873478	6884438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6873782_6883703_6883920_6884370
transcript_30385.known	chr12	+	4702	10	FSM	ENSG00000111676.15	ENST00000396684.3	4702	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	40.8595909529147	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6927912	True	NA	28	True	AAAACA	-21	NA	6927958	6942321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6928385_6933839_6934029_6934175_6934314_6934464_6934579_6935546_6937562_6937844_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_30387.nic	chr12	+	1973	5	ISM	ENSG00000111676.15	ENST00000396684.3	4702	10	9733	0	-6	0	3prime_fragment	FALSE	canonical	3	78	junction_1	17.5783958312469	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCTGTGACTATTCTTT	6937519	True	NA	28	True	AAAACA	-21	NA	6937691	6942321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_6938068_6938480_6939178_6940879_6941024_6941373_6941555_6941746
transcript_30392.known	chr12	+	640	3	FSM	ENSG00000111678.11	ENST00000542222.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	447.5	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGTGTCAGTCTCTTGC	6943421	False	NA	16	True	AATAAA	-17	NA	6943432	6946003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6943663_6944475_6944653_6945770
transcript_30394.known	chr12	+	551	3	FSM	ENSG00000111678.11	ENST00000540506.2	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	439	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTAGCCTTGGTGTCAGT	6943988	False	NA	9	True	AATAAA	-10	NA	6944121	6945996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6944174_6944379_6944653_6945770
transcript_30408.known	chr12	-	1097	1	FSM	ENSG00000272173.1	ENST00000607421.1	1097	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCGCAGTTTCCTAAAG	-6944426	True	NA	NA	False	AGTAAA	-18	NA	6944604	6943507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6943500_6944600
transcript_30409.known	chr12	+	561	3	FSM	ENSG00000111678.11	ENST00000229281.6	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	60	19201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6927076	True	NA	15	True	AATAAA	-16	NA	6944021	6946002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6944174_6944475_6944653_6945770
transcript_30410.known	chr12	+	662	3	FSM	ENSG00000111678.11	ENST00000537087.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	442.5	1748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGGTGTCAGTCTCTTG	6942550	False	NA	15	True	AATAAA	-16	NA	6943833	6946002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6944174_6944475_6944566_6945770
transcript_30413.known	chr12	+	2159	16	FSM	ENSG00000111679.17	ENST00000399448.5	2159	16	0	0	0	0	multi-exon	TRUE	canonical	3	69	junction_1	25.4816709725943	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945113	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6946740_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_30414.known	chr12	+	2161	16	FSM	ENSG00000111679.17	ENST00000318974.14	2161	16	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	34.694860330218	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6951338	False	NA	10	True	AATAAA	-18	NA	6951355	6961316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6951521_6951608_6951732_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_30416.nic	chr12	+	2036	15	NIC	ENSG00000111679.17	novel	2159	16	NA	NA	0	0	intron_retention	FALSE	canonical	2	6	junction_1	35.3839725045688	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCGCCTCTGAGCCCTTTG	6945113	True	NA	10	True	AATAAA	-18	NA	6946576	6961316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_6946740_6951982_6952178_6954804_6954995_6955150_6955268_6955371_6955486_6955659_6955757_6956141_6956222_6956418_6956569_6957653_6957786_6957918_6958074_6959926_6959995_6960087_6960240_6960343_6960436_6960805_6960946_6961125
transcript_30423.known	chr12	+	350	2	FSM	ENSG00000257084.1	ENST00000537269.1	350	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGACCTGTCTTTTGTCTA	6962757	False	NA	28	True	AATAAA	-42	NA	6963245	6964447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6963349_6964200
transcript_30428.known	chr12	-	1379	10	FSM	ENSG00000215021.10	ENST00000535923.6	1379	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	647.666237776492	5363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	-6940497	True	NA	22	True	NA	NA	NA	6970664	6965326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_30435.known	chr12	-	1354	9	FSM	ENSG00000215021.10	ENST00000440277.6	1354	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	742.497306392421	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGTAACTGGCAGCAAGCA	-6970737	False	NA	22	True	NA	NA	NA	6970753	6965326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967239_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_30440.known	chr12	-	1518	9	FSM	ENSG00000215021.10	ENST00000543465.5	1518	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	669.670243011439	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970700	False	NA	-3	True	AATAAA	-21	NA	6970716	6965351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967249_6967675_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_30441.known	chr12	-	1735	9	FSM	ENSG00000215021.10	ENST00000677354.1	1735	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	674.540955020524	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6940451	True	NA	-3	True	AATAAA	-21	NA	6970618	6965351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6965910_6965917_6966423_6966501_6967170_6967780_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_30448.known	chr12	-	1391	8	FSM	ENSG00000215021.10	ENST00000676496.1	1391	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	702.728850079954	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970708	False	NA	-3	True	AATAAA	-21	NA	6970724	6965351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6966423_6966501_6967170_6967336_6967891_6968022_6968410_6968596_6969497_6969578_6970195_6970281_6970416
transcript_3046.known	chr1	-	1392	4	FSM	ENSG00000127423.11	ENST00000538789.5	1392	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	78.0185163207356	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAATAGCTTGAGTACT	-25856411	True	NA	NA	False	AATAAA	-18	NA	25859458	25831912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25832159_25835021_25835847_25837412_25837555_25859279
transcript_30460.known	chr12	-	858	4	FSM	ENSG00000215021.10	ENST00000546111.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	736.333861475592	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGGCTTCACGTGTTCA	-6970735	False	NA	-3	True	AATAAA	-21	NA	6970751	6965351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6965713_6966423_6966501_6970195_6970281_6970416
transcript_30462.known	chr12	+	2972	12	FSM	ENSG00000182326.16	ENST00000328916.7	2972	12	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_4	6.81999975764038	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	NA	False	NA	6	True	AATAAA	-18	NA	7060514	7071032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7060878_7061751_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_30463.known	chr12	+	2682	12	FSM	ENSG00000182326.16	ENST00000360817.10	2682	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	8.23618302029536	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTGACTTACCTCAT	7060530	True	NA	6	True	AATAAA	-18	NA	7060717	7071032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7060878_7061838_7061918_7062474_7062683_7062889_7063068_7064266_7064393_7065099_7065300_7065816_7065971_7066517_7066634_7067038_7067118_7067642_7067772_7068455_7068531_7069854
transcript_30470.known	chr12	+	4873	6	FSM	ENSG00000126749.16	ENST00000599672.6	4873	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_4	41.2960046493604	3190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCCTTCATTTCTTGG	6957764	True	NA	4	True	AATAAA	-16	NA	6970912	6979936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6975695
transcript_30471.known	chr12	+	616	5	FSM	ENSG00000126749.16	ENST00000539196.2	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	281.964980095047	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGTTTTGGGGTTCC	6957912	False	NA	NA	False	NA	NA	NA	6971060	6975977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975695
transcript_30472.known	chr12	-	2235	13	FSM	ENSG00000111684.11	ENST00000261407.9	2235	13	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_4	52.9897133623331	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTAGCATTCCTGACTGC	-7008809	True	NA	-8	True	GATAAA	-27	NA	7018476	6976184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_6976892_6977133_6977263_6977366_6977526_6977597_6977746_6978340_6978508_6978602_6978690_6979470_6979580_6981003_6981183_6981594_6981633_6981810_6981905_6982675_6982783_6983431_6983540_7018273
transcript_30473.known	chr12	+	958	8	FSM	ENSG00000126749.16	ENST00000261406.7	958	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	337.771447905841	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATAAAAAGAATGCAGC	6957793	True	NA	NA	False	NA	NA	NA	6970941	6988260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_6971092_6974338_6974441_6974551_6974694_6975089_6975149_6975228_6975379_6983001_6983207_6987781_6987839_6988167
transcript_30474.known	chr12	-	2488	11	FSM	ENSG00000159403.18	ENST00000647956.2	2488	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	12.9011627382961	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTGCAAAATGAGTCAAAA	-7091979	True	NA	-12	True	AATAAA	-19	NA	7092445	7080218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7091451_7091681_7092386
transcript_30476.known	chr12	-	1881	10	FSM	ENSG00000159403.18	ENST00000648162.1	1881	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	12.5560471880148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTGCTGGACACCCA	-7090326	False	466	NA	False	AAAACA	-1	NA	7090792	7080740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7081302_7082031_7082107_7085860_7086017_7086378_7086458_7088609_7088732_7088838_7088987_7089292_7089490_7089586_7089734_7090055_7090249_7090589
transcript_30483.known	chr12	-	957	4	FSM	ENSG00000139194.8	ENST00000266560.8	957	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.44948974278318	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-7128812	False	77	-14	True	TTTAAA	-16	NA	7128889	7123685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7124175_7124628_7124731_7128239_7128419_7128702
transcript_30484.nnic	chr12	-	1309	4	Fusion	ENSG00000139194.8_ENSG00000256967.1	novel	957	4	NA	NA	1	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTCTTTTTGTCCATTTCT	-7130174	True	NA	-14	True	TTTAAA	-16	NA	7130251	7123685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_7124175_7124628_7124731_7128239_7128419_7129712
transcript_30486.known	chr12	-	813	3	FSM	ENSG00000139178.12	ENST00000545337.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACTCAGATTTGTTTT	-7108476	True	NA	0	True	AGTAAA	-17	NA	7109210	7101604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7102088_7108250_7108480_7109109
transcript_30490.known	chr12	-	354	2	FSM	ENSG00000139178.12	ENST00000539927.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCATGTAGGGGCAGTCG	-7108394	False	NA	NA	False	NA	NA	NA	7109128	7108144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7108480_7109109
transcript_30493.known	chr12	-	3335	6	FSM	ENSG00000139178.12	ENST00000266542.9	3335	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.96386945839634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATGTGTATGTCTAGA	-7108480	True	NA	-3	True	AATATA	-13	NA	7109214	7094553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7097164_7099685_7099761_7099900_7100027_7101897_7102088_7108250_7108480_7109109
transcript_30494.known	chr12	+	4013	18	FSM	ENSG00000139182.15	ENST00000266546.11	4013	18	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_4	12.2389700360468	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTGAGGCGCCTCCTG	7129150	True	NA	NA	False	AATAAA	-22	NA	7130370	7158945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7130713_7133023_7133147_7133572_7133769_7135326_7135536_7135803_7135954_7136205_7136392_7136828_7137111_7137954_7138068_7141241_7141405_7142085_7142140_7142868_7143027_7143162_7143312_7148971_7149199_7149522_7149694_7150543_7150690_7150927_7151064_7157488_7157692_7157940
transcript_30495.known	chr12	-	735	3	FSM	ENSG00000256967.1	ENST00000538062.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTCAGGCTGTCTGTT	NA	False	NA	NA	False	AATAAA	-23	NA	7131198	7129507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7130018_7130322_7130374_7131024
transcript_30499.known	chr12	+	3252	15	FSM	ENSG00000139197.11	ENST00000266563.9	3252	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_1	21.4966774841403	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTGGTCATGAAGCT	NA	False	NA	40	True	AATAAA	-21	NA	7189583	7211483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_30503.known	chr12	+	3237	16	FSM	ENSG00000139197.11	ENST00000675855.1	3237	16	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	25.4235236652112	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATGGAACTGATGTGGGT	7187069	True	NA	16	True	AATAAA	-25	NA	7189685	7211459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7189751_7190361_7190525_7190887_7190924_7191225_7191359_7191568_7191701_7199010_7199114_7201750_7201842_7202240_7202352_7202611_7202705_7203431_7203552_7207658_7207803_7208009_7208081_7208456_7208670_7209004_7209171_7209682_7209841_7210021
transcript_30504.known	chr12	-	1236	2	FSM	ENSG00000184344.4	ENST00000329913.4	1236	2	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_1	0	946	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACCTGTGTTTATAATTT	-7689619	True	NA	15	True	AATAAA	-42	NA	7695775	7689783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7690705_7695460
transcript_30505.known	chr12	+	1100	4	FSM	ENSG00000187569.3	ENST00000345088.3	1100	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	2.49443825784929	216	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCTTGATTTTATTCTT	7710735	True	NA	NA	False	AATAAA	-27	NA	7711432	7717559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7711653_7715182_7715428_7716197_7716240_7716966
transcript_30506.known	chr12	+	824	4	FSM	ENSG00000205857.2	ENST00000640040.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGCACAGTGGAGCACGC	NA	False	NA	NA	False	AAGAAA	-17	NA	7766081	7774121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7766171_7769982_7770316_7770438_7770519_7773799
transcript_30508.known	chr12	+	836	6	FSM	ENSG00000111704.11	ENST00000541267.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	432.060366152694	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAACATCCAGTCCTGGAGC	7787382	True	NA	NA	False	NA	NA	NA	7787793	7794808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7787844_7788418_7788579_7789619_7789766_7792949_7793213_7794456_7794544_7794678
transcript_3051.known	chr1	-	2161	3	FSM	ENSG00000127423.11	ENST00000374298.4	2161	3	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	35	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTTGTGATAATTGGTAA	-25856410	True	NA	-11	True	AATAAA	-14	NA	25859457	25834005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25835847_25837412_25837555_25859279
transcript_30521.nnic	chr12	+	2207	5	NNC	ENSG00000111704.11	novel	5182	4	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	389.626423641929	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7786163	True	NA	31	True	AATAAA	-19	NA	7789340	7799146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678_7795307_7798342
transcript_30531.known	chr12	+	5182	4	FSM	ENSG00000111704.11	ENST00000229307.9	5182	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_3	122.158367157828	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGTTAAGCATCTGAGAA	7786224	True	NA	31	True	AATAAA	-19	NA	7789401	7799146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794678
transcript_30533.known	chr12	+	870	4	FSM	ENSG00000111704.11	ENST00000526286.1	870	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	404.626576817028	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAGTGAAACTGATATT	7789567	False	NA	NA	False	NA	NA	NA	7789614	7795095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_7789766_7792949_7793213_7794456_7794544_7794726
transcript_30560.known	chr12	-	3827	10	FSM	ENSG00000059804.16	ENST00000075120.12	3827	10	0	0	0	0	multi-exon	FALSE	canonical	3	2864	junction_5	185.662444263444	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGGCTTATTTACTT	-7899769	True	NA	-12	True	AATAAA	-19	NA	7936187	7919229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7929872_7930479_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_30561.known	chr12	-	1784	5	FSM	ENSG00000059804.16	ENST00000495813.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_2	184.80936123476	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGAGTGAGACTGTGTCT	-7899751	True	NA	NA	False	NA	NA	NA	7936169	7929503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_30562.known	chr12	-	4414	9	FSM	ENSG00000059804.16	ENST00000486749.5	4414	9	0	0	0	0	multi-exon	FALSE	canonical	3	2923	junction_6	179.343943304479	1298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTATGGGCTTATTTACT	-7899749	True	NA	-13	True	AATAAA	-18	NA	7936167	7919230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_7921632_7922820_7923025_7924409_7924512_7925843_7925949_7929683_7930643_7931244_7931486_7932986_7933148_7933809_7933903_7936019
transcript_30572.nnic	chr12	-	522	2	NNC	ENSG00000282080.1	novel	561	2	NA	NA	-26	-3240	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGGATGCTGTTGGTGTG	-8018807	True	NA	NA	False	AATAAA	-17	NA	8019033	8017332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_8017721_8018899
transcript_30581.known	chr12	+	2634	8	FSM	ENSG00000089818.18	ENST00000339754.11	2634	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_5	27.2598980338578	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCTTTTAAGAAGTTGA	8080055	True	NA	130	True	AATAAA	-30	NA	8082273	8097881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_30583.known	chr12	+	2578	7	FSM	ENSG00000089818.18	ENST00000639071.1	2578	7	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	20.204509947589	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAATAATGGTAATTAAAAA	8080055	True	NA	-13	True	TATAAA	-18	NA	8082273	8097738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8093056_8095600_8095704_8096041
transcript_30584.known	chr12	+	2446	7	FSM	ENSG00000089818.18	ENST00000450991.6	2446	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	86.5051379334713	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTCTTTTATCTTTTAAT	8080049	True	NA	18	True	ATTAAA	-14	NA	8082267	8097769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092675_8092785_8092871_8093056_8095600_8095704_8096041
transcript_30586.known	chr12	+	2067	6	FSM	ENSG00000089818.18	ENST00000638787.1	2067	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	98.2718677954174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTATTCTTGCAGAGCCA	8080061	True	NA	NA	False	NA	NA	NA	8082279	8097511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8092871_8093056_8095600_8095704_8096041
transcript_30595.known	chr12	+	5166	6	FSM	ENSG00000089818.18	ENST00000640648.1	5166	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	27.938503896952	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAATGGTAATTAAAAATA	NA	False	NA	-11	True	TATAAA	-20	NA	8081894	8097740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8092785_8092871_8093056_8095600_8095704_8096041
transcript_30596.known	chr12	-	1783	1	FSM	ENSG00000279865.1	ENST00000624929.1	1783	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	555	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGTTCCTTATTTCTG	-8082074	True	NA	NA	False	AATAAA	-21	NA	8082163	8080380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8080400_8082200
transcript_30597.known	chr12	+	2517	8	FSM	ENSG00000089818.18	ENST00000638237.1	2517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	88.6695309240199	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTCTTTTATCTTTTAA	8080047	True	NA	17	True	ATTAAA	-13	NA	8082265	8097768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935_8090037_8090194_8090300_8091768_8091851_8092675_8092785_8092871_8093044_8095600_8095704_8096041
transcript_30598.known	chr12	+	1036	2	FSM	ENSG00000089818.18	ENST00000546181.2	1036	2	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGAACACTTTTTGCCCG	8080009	True	NA	NA	False	NA	NA	NA	8082227	8090815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8082384_8089935
transcript_30604.nnic	chr12	-	1052	5	Fusion	ENSG00000226091.7_ENSG00000284673.1	novel	447	3	NA	NA	35	0	multi-exon	FALSE	canonical	3	11	junction_2	4.96865172858795	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8395891	True	NA	0	True	TATAAA	-23	NA	8396768	8356962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_8357142_8370212_8370430_8390269_8390512_8390901_8390970_8396422
transcript_30605.nnic	chr12	-	1064	5	Fusion	ENSG00000226091.7_ENSG00000284673.1	novel	447	3	NA	NA	56	0	multi-exon	FALSE	canonical	1	4	junction_4	6.86931583201704	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8395870	True	NA	0	True	TATAAA	-23	NA	8396747	8356962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_8357142_8370212_8370430_8390269_8390512_8390901_8391003_8396422
transcript_30608.nnic	chr12	-	984	4	Fusion	ENSG00000226091.7_ENSG00000284673.1	novel	447	3	NA	NA	35	0	multi-exon	FALSE	canonical	3	11	junction_2	1.69967317119759	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8395891	True	NA	0	True	TATAAA	-23	NA	8396768	8356962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_8357142_8370212_8370430_8390269_8390512_8396422
transcript_30610.nic	chr12	-	835	4	Fusion	ENSG00000226091.7_ENSG00000284673.1	novel	662	2	NA	NA	35	0	multi-exon	FALSE	canonical	3	14	junction_1	4.02768199119819	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8395891	True	NA	0	True	TATAAA	-23	NA	8396768	8356962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_8357142_8390269_8390512_8390901_8390970_8396422
transcript_30611.nic	chr12	-	961	4	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	35	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	1.69967317119759	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-8395891	True	NA	NA	False	AATAAA	-19	NA	8396768	8384116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_8384422_8390269_8390512_8390901_8390970_8396422
transcript_30614.nnic	chr12	-	767	3	Fusion	ENSG00000226091.7_ENSG00000284673.1	novel	662	2	NA	NA	35	0	multi-exon	FALSE	canonical	3	12	junction_2	1	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8395891	True	NA	0	True	TATAAA	-23	NA	8396768	8356962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_8357142_8390269_8390512_8396422
transcript_30615.nnic	chr12	-	893	3	NIC	ENSG00000226091.7	novel	2157	7	NA	NA	35	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-8395891	True	NA	NA	False	AATAAA	-19	NA	8396768	8384116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_8384422_8390269_8390512_8396422
transcript_30618.known	chr12	-	662	2	FSM	ENSG00000226091.7	ENST00000420040.2	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCTCCTGGATGCAG	-8389875	False	NA	0	True	TATAAA	-23	NA	8390752	8356962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8357142_8390269
transcript_30619.known	chr12	-	456	2	FSM	ENSG00000226091.7	ENST00000536539.1	456	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGAATTTTATTTTTAAT	-8389543	False	NA	NA	False	AATAAA	-19	NA	8390420	8384116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8384422_8390269
transcript_30620.nnic	chr12	-	520	2	NNC	ENSG00000226091.7	novel	3033	5	NA	NA	36	-11311	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-8395890	True	NA	NA	False	NA	NA	NA	8396767	8395427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_8395603_8396422
transcript_30649.known	chr12	+	620	2	FSM	ENSG00000256552.2	ENST00000537764.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCATTTCTTTTTCTTCT	8320284	True	NA	NA	False	NA	NA	NA	8320380	8369555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8320427_8368981
transcript_30658.known	chr12	-	470	8	FSM	ENSG00000197614.11	ENST00000538694.5	470	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.349927106111883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTCTGTGATCATTGAAA	-8658565	True	NA	NA	False	NA	NA	NA	8658578	8648101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8648204_8649500_8649575_8650501_8650590_8651661_8651692_8654436_8654482_8655414_8655448_8655785_8655831_8658525
transcript_30663.known	chr12	+	1589	9	FSM	ENSG00000166532.16	ENST00000544257.5	1589	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	401.279516048352	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8681253	False	NA	35	True	AATAAA	-26	NA	8681690	8783095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8681819_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_30665.nic	chr12	+	1841	9	NIC	ENSG00000166532.16	novel	1519	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_6	385.836408825036	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8687006	True	NA	35	True	AATAAA	-26	NA	8697917	8783095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8777589_8777803_8780574_8780740_8782911
transcript_30671.nnic	chr12	+	1477	7	NNC	ENSG00000166532.16	novel	2033	8	NA	NA	-4	-1466	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_6	111.072673907172	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGGTTGATTGTTGAT	8687006	True	NA	12	True	AATAAA	-40	NA	8697917	8775724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320_8773467_8775526
transcript_30674.known	chr12	+	4931	6	FSM	ENSG00000166532.16	ENST00000535829.6	4931	6	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	36.6464186517591	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGACTGCTTGCTTGC	8687079	True	NA	10	True	AATATA	-21	NA	8697990	8777191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8698298_8713810_8714042_8749861_8750093_8751956_8752044_8753889_8754094_8773320
transcript_30681.known	chr12	+	650	3	FSM	ENSG00000166532.16	ENST00000510357.2	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	591	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8779797	False	NA	35	True	AATAAA	-26	NA	8779811	8783095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8780113_8780574_8780740_8782911
transcript_30683.known	chr12	+	1893	2	FSM	ENSG00000166532.16	ENST00000504495.6	1893	2	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATGCCGTGTGACTTGTTC	8779016	False	NA	35	True	AATAAA	-26	NA	8779030	8783095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8780740_8782911
transcript_30686.known	chr12	+	5390	15	FSM	ENSG00000111752.11	ENST00000544916.6	5390	15	0	0	0	0	multi-exon	FALSE	canonical	3	2546	junction_5	486.967820459695	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGTGAAAATGTGTTTAAA	8913946	False	NA	18	True	ATTAAA	-21	NA	8914508	8941467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8914828_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632_8922789_8930434_8930928_8932562_8933351_8933864_8934013_8934266_8934479_8935123_8935239_8936855_8936965_8937175_8937327_8937828_8938061_8939304
transcript_30706.nnic	chr12	+	689	3	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_2	3	81	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGCGTGA	8805141	False	NA	8	True	AATAAA	-14	NA	8805151	8821087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8805430_8807289_8807459_8820845
transcript_3071.known	chr1	-	867	5	FSM	ENSG00000117632.23	ENST00000374291.5	867	5	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_4	1610.12934263059	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGCTAGTACTGTATTG	-25905117	False	NA	43	True	NA	NA	NA	25905128	25900740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905048
transcript_30714.known	chr12	+	723	2	FSM	ENSG00000249790.3	ENST00000422780.3	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	1566	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAATTCCCAACAGCAGTT	8788246	False	NA	NA	False	NA	NA	NA	8788256	8794497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8788787_8794304
transcript_30715.known	chr12	+	701	2	FSM	ENSG00000249790.3	ENST00000654855.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCAGCTTGACCTTTTC	8788259	False	NA	NA	False	NA	NA	NA	8788269	8790183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8788787_8789999
transcript_30717.nnic	chr12	+	777	2	Antisense	novelGene_ENSG00000256661.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	8805012	False	NA	26	True	ATTAAA	-21	NA	8805030	8810540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8805430_8810162
transcript_30719.nnic	chr12	+	610	2	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	390	junction_1	0	1116	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGGCTCTGCGTGAATT	8805046	False	NA	11	True	AATAAA	-17	NA	8805064	8821090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8805430_8820845
transcript_30721.nnic	chr12	+	585	2	Antisense	novelGene_ENSG00000256904.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	150	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGCCGGCTCTGCGTGA	8819470	False	NA	8	True	AATAAA	-14	NA	8819499	8821087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_8819843_8820845
transcript_30723.known	chr12	+	1972	2	FSM	ENSG00000249790.3	ENST00000514568.2	1972	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCATGCTGCT	8788263	False	NA	NA	False	AATAAA	-16	NA	8788273	8795789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8788761_8794304
transcript_30724.known	chr12	-	2450	7	FSM	ENSG00000003056.8	ENST00000000412.8	2450	7	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_1	40.0444197804832	1811	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTTGTCATTTGTGTG	-8936371	True	NA	NA	False	ATTAAA	-17	NA	8949645	8940360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8941941_8942415_8942543_8943404_8943536_8943800_8943911_8945417_8945585_8946228_8946406_8949487
transcript_30725.known	chr12	-	648	3	FSM	ENSG00000003056.8	ENST00000540837.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_2	20	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGACAGTTGTGCATTAA	-8936336	True	NA	NA	False	AATATA	-43	NA	8949610	8945236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_8945585_8946228_8946406_8949487
transcript_30726.known	chr12	+	618	6	FSM	ENSG00000111752.11	ENST00000538657.5	618	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	1325.67875444996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCCAACTCATCCTGATGC	8910925	False	NA	NA	False	NA	NA	NA	8913895	8922691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8913951_8917629_8917792_8919755_8919867_8920984_8921066_8921600_8921751_8922632
transcript_30749.nnic	chr12	+	1674	4	NNC	ENSG00000139187.10	novel	592	5	NA	NA	0	0	intron_retention	FALSE	canonical	2	2	junction_1	14.3372087784044	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGAAAACTGTTCATTCT	8949284	True	NA	NA	False	AATAAA	-24	NA	8950043	9010751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_8950186_8992205_8992311_9008974_9009076_9009425
transcript_30752.known	chr12	+	851	3	FSM	ENSG00000139187.10	ENST00000538029.1	851	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	10	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCTAGCTATTTGGGAA	8949365	False	NA	NA	False	AATAAA	-28	NA	8950124	9010063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_8950237_9008974_9009076_9009425
transcript_3076.known	chr1	-	1137	5	FSM	ENSG00000117632.23	ENST00000357865.6	1137	5	0	0	0	0	multi-exon	FALSE	canonical	2	96	junction_4	1612.29066470658	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGTTAATAAAACTGCACAG	-25906980	False	NA	-42	True	NA	NA	NA	25906991	25900594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906787
transcript_30765.nnic	chr12	-	1070	9	NNC	ENSG00000256673.1	novel	400	4	NA	NA	7296	1293	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_7	12.0357540270645	41	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-5	True	ATTAAA	-16	NA	9407555	9397061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9397215_9397614_9397690_9398381_9398485_9399794_9399864_9400235_9400327_9401746_9401860_9402426_9402554_9406307_9406399_9407307
transcript_30783.nnic	chr12	+	687	5	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-132	130	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	10.1734949746879	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	NA	False	NA	4	True	AATAAA	-18	NA	9647914	9657217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656567_9656650_9656920
transcript_30789.nnic	chr12	+	733	5	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-130	130	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	10.1734949746879	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	9647399	True	NA	4	True	AATAAA	-18	NA	9647916	9657217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656567_9656698_9656920
transcript_30790.nnic	chr12	+	791	5	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-130	188	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	10.1734949746879	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAGTCTCTTAAAATAT	9647399	True	NA	62	True	ATTAAA	-4	NA	9647916	9657275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656567_9656698_9656920
transcript_30794.nnic	chr12	+	973	4	NNC	ENSG00000256594.9	novel	439	4	NA	NA	-500	130	intron_retention	FALSE	canonical	3	17	junction_1	6.34209919681348	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	NA	False	NA	4	True	AATAAA	-18	NA	9647546	9657217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_9647990_9653682_9653809_9655872_9655980_9656920
transcript_30795.nic	chr12	+	837	4	NIC	ENSG00000256594.9	novel	805	5	NA	NA	23	130	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	11.5181016954473	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGATGTTAAGATGCACT	9647552	False	NA	4	True	AATAAA	-18	NA	9648069	9657217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_9648377_9653682_9653809_9655872_9655980_9656920
transcript_30796.known	chr12	+	2612	4	FSM	ENSG00000256594.9	ENST00000575094.5	2612	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	9.39266853573691	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATGGAAGCATTTGCTT	9647529	False	NA	NA	False	GATAAA	-16	NA	9648046	9658412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_9648934_9653682_9653809_9655872_9655980_9656920
transcript_30797.known	chr12	-	606	2	FSM	ENSG00000256442.2	ENST00000653830.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTCTGTGTGTGTGTCC	-9648071	False	NA	NA	False	ATTAAA	-18	NA	9648083	9647013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_9647377_9647840
transcript_30803.known	chr12	-	1676	5	FSM	ENSG00000110848.8	ENST00000228434.7	1676	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTCCAAGAAAGTTCAT	NA	False	NA	NA	False	AATAAA	-17	NA	9760901	9752485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_9753590_9754586_9754691_9755061_9755262_9756296_9756420_9760756
transcript_30807.nnic	chr12	-	730	3	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21275	-4	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	8	54	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGGAGTTAATTGCCT	-9910742	True	NA	-19	True	AATAAA	-14	NA	9911072	9898676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9898977_9900827_9900876_9910690
transcript_30809.nnic	chr12	-	865	3	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21268	-5	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	1.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAAGGAGTTAATTGCC	-9910749	True	NA	-20	True	AATAAA	-13	NA	9911079	9898677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9898977_9905223_9905401_9910690
transcript_30810.nnic	chr12	-	669	2	NNC	ENSG00000188393.9	novel	732	5	NA	NA	21288	-4	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGGAGTTAATTGCCT	-9910729	True	NA	-19	True	AATAAA	-14	NA	9911059	9898676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_9898977_9910690
transcript_30811.known	chr12	-	425	3	FSM	ENSG00000172243.18	ENST00000310002.4	425	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGCTATTTTTATGATTC	-10130174	True	NA	NA	False	AATAAA	-16	NA	10130189	10127326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10127443_10127746_10127846_10129979
transcript_30812.known	chr12	+	792	6	FSM	ENSG00000139112.11	ENST00000535576.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	155.23324386226	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGGAAGCCCAGCAGA	10213425	False	NA	NA	False	NA	NA	NA	10213439	10221852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213715_10213835_10213975_10214073_10214188_10218062_10218142_10220439_10220559_10221786
transcript_30816.known	chr12	+	531	5	FSM	ENSG00000139112.11	ENST00000544284.5	531	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	138.998875894735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACAGAAGGTGAAGACATC	10206227	True	NA	NA	False	NA	NA	NA	10212853	10221950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10212945_10213141_10213220_10218062_10218142_10220439_10220559_10221786
transcript_30819.known	chr12	+	1883	4	FSM	ENSG00000139112.11	ENST00000266458.10	1883	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_1	10.3708994574027	1949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACTGAGTTCAGCAATGT	10206250	True	NA	20	True	AATAAA	-21	NA	10212876	10223128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213220_10218062_10218142_10220439_10220559_10221786
transcript_30820.known	chr12	+	1700	4	FSM	ENSG00000139112.11	ENST00000539170.5	1700	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	152.998910671503	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGCTTACCTTAAAAATC	10213425	False	NA	2	True	AATAAA	-3	NA	10213439	10223110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213618_10218062_10218142_10220439_10220559_10221786
transcript_30821.known	chr12	+	2294	4	FSM	ENSG00000139112.11	ENST00000546017.5	2294	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	144.529120479807	1076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATCCACTGAGTTCAGC	10213414	True	NA	15	True	AATAAA	-16	NA	10213428	10223123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10214188_10218062_10218142_10220439_10220559_10221786
transcript_30822.known	chr12	+	584	3	FSM	ENSG00000139112.11	ENST00000541453.1	584	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	167.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCGCGACATGGGGAAA	10206250	True	NA	NA	False	NA	NA	NA	10212876	10221908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10213220_10220439_10220559_10221786
transcript_30824.known	chr12	-	649	3	FSM	ENSG00000256288.1	ENST00000539009.1	649	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	0.5	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	-10337942	True	NA	-6	True	AATAAA	-20	NA	10338292	10332860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10333064_10336111_10336310_10338044
transcript_30826.nnic	chr12	-	560	3	NNC	ENSG00000256288.1	novel	649	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	18	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGACTCTTCGTATATT	-10337949	True	NA	-6	True	AATAAA	-20	NA	10338299	10332860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_10333064_10336111_10336214_10338044
transcript_30839.known	chr12	+	769	3	FSM	ENSG00000245648.2	ENST00000666750.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTGTTATTGTTT	10363665	True	NA	NA	False	AGTAAA	-12	NA	10363707	10380042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10364034_10374034_10374137_10379701
transcript_30841.known	chr12	+	493	4	FSM	ENSG00000245648.2	ENST00000663376.1	493	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.86744175568088	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGGTGGTATTGATCCTT	10363627	False	NA	6	True	TATAAA	-20	NA	10363637	10379883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_10363688_10363874_10364034_10374034_10374137_10379701
transcript_30852.known	chr12	-	705	6	FSM	ENSG00000111196.10	ENST00000540074.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	360.339284563868	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTTTGTATATTTAATTA	-10607540	True	NA	9	True	ATTAAA	-25	NA	10613591	10606259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613540
transcript_30853.known	chr12	-	868	6	FSM	ENSG00000111196.10	ENST00000545236.5	868	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	353.587669468266	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTTTTCAGGCTGTTTGTA	-10607558	True	NA	-1	True	ATTAAA	-15	NA	10613609	10606269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10612639_10612979_10613438
transcript_30866.known	chr12	-	666	5	FSM	ENSG00000111196.10	ENST00000539554.5	666	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	332.284046412102	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	-10607540	True	NA	-10	True	AATAAA	-16	NA	10613591	10606012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613540
transcript_30872.known	chr12	-	2606	5	FSM	ENSG00000111196.10	ENST00000320756.7	2606	5	0	0	0	0	multi-exon	FALSE	canonical	3	763	junction_2	10.4522724801834	1785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTTTTTCCAAGTACT	-10607558	True	NA	NA	False	AATAAA	-18	NA	10613609	10604192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609830_10609942_10610621_10610681_10613438
transcript_30873.known	chr12	-	1057	6	FSM	ENSG00000111196.10	ENST00000544850.5	1057	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	349.563155953255	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGAGTAGTTTTTTGT	-10607543	True	NA	-10	True	AATAAA	-16	NA	10613594	10606012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10606375_10607853_10607937_10609097_10609384_10609830_10609942_10610621_10610681_10613438
transcript_30874.known	chr12	-	319	2	FSM	ENSG00000111196.10	ENST00000625272.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGAGGATGAGGTGAAACT	-10607554	True	NA	NA	False	AAAACA	-20	NA	10613605	10612826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10612979_10613438
transcript_30875.known	chr12	-	2771	11	FSM	ENSG00000060140.9	ENST00000075503.8	2771	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_9	5.20096144957834	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGGACCTTTCATATATT	-10674011	True	NA	-4	True	AATAAA	-32	NA	10674052	10618922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10620349_10621875_10621973_10622637_10622679_10624650_10624860_10627640_10627725_10629492_10629675_10631044_10631309_10633989_10634125_10634566_10634687_10637070_10637197_10673965
transcript_30882.known	chr12	-	685	4	FSM	ENSG00000060138.13	ENST00000544622.4	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1889.41913472545	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTCTTGCTTTTCTGCTT	-10718107	False	NA	-10	True	ATTAAA	-16	NA	10718121	10710350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10710789_10713210_10713334_10715693_10715784_10718087
transcript_30890.nnic	chr12	-	1106	8	NNC	ENSG00000231887.8	novel	507	5	NA	NA	-14	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	27.567357212353	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCTGGTGGTGTCTCT	NA	False	NA	-4	True	AATAAA	-16	NA	11171622	10880964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_10881057_10882216_10882489_10882551_10882699_10883060_10883097_10884153_10884276_10973654_10973722_11047019_11047189_11171421
transcript_30911.nnic	chr12	-	941	4	Fusion	ENSG00000231887.8_ENSG00000255837.2	novel	534	3	NA	NA	-49	0	multi-exon	FALSE	canonical	0	0	junction_2	10.6249183003395	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGTGTACATTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	11171657	10995960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10996326_11047019_11047189_11121009_11121181_11171421
transcript_30916.nic	chr12	-	808	3	ISM	ENSG00000231887.8	ENST00000541977.5	507	5	-78	90697	-14	0	5prime_fragment	FALSE	canonical	3	28	junction_1	28.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAATTAAAAAGAAAAAAAT	NA	False	NA	NA	False	NA	NA	NA	11171622	10973283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_10973722_11047019_11047189_11171421
transcript_30917.nnic	chr12	-	940	3	NNC	ENSG00000231887.8	novel	384	2	NA	NA	-49	34466	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGAAGTGTAGACTCTTC	NA	False	NA	NA	False	AATAAA	-36	NA	11171657	11086369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_11086903_11121009_11121181_11171421
transcript_30920.known	chr12	-	384	2	FSM	ENSG00000231887.8	ENST00000541175.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACTAATGACTGTCAATC	NA	False	NA	NA	False	NA	NA	NA	11171460	11120835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_11121181_11171421
transcript_30921.known	chr12	-	534	3	FSM	ENSG00000231887.8	ENST00000546265.1	534	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCACTTAGACGTGTTTT	NA	False	NA	NA	False	AATAGA	-27	NA	11171608	11047012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_11047189_11121009_11121181_11171421
transcript_30943.nic	chr12	-	1018	7	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_4	26.6937362606952	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171638	10845848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_30944.nnic	chr12	-	1085	7	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	9.86576572463249	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171638	10845848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11121009_11121181_11171421
transcript_30948.nnic	chr12	-	682	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	28.1040922287129	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171638	10845848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10845951_10847044_10847136_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_30950.nic	chr12	-	914	6	NIC	ENSG00000275778.2	novel	1618	10	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	24.2239550858236	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171638	10845848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_30955.known	chr12	-	680	5	FSM	ENSG00000275778.2	ENST00000535024.6	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	25.9277843249283	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGCAGGAAGCATCAT	NA	False	NA	NA	False	NA	NA	NA	11171600	10847138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10847368_10848371_10848408_10973654_10973722_11047019_11047189_11171421
transcript_30961.nnic	chr12	-	1621	4	NIC	ENSG00000212127.6	novel	1662	5	NA	NA	-65	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	34.3155293643498	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATTTTTTGCTGTTTAT	NA	False	NA	NA	False	AATAAA	-18	NA	11171638	10937409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_10938578_10973654_10973722_11047019_11047189_11171421
transcript_30962.nnic	chr12	-	1244	4	Fusion	ENSG00000212125.2_ENSG00000231887.8	novel	534	3	NA	NA	-30	621	multi-exon	FALSE	canonical	2	6	junction_1	33.2899717966571	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGGAATACATTTTGTA	NA	False	NA	NA	False	AATAAA	-19	NA	11171638	10963803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10964595_10973654_10973722_11047019_11047189_11171421
transcript_30966.nnic	chr12	-	751	3	Fusion	ENSG00000231887.8_ENSG00000255837.2	novel	534	3	NA	NA	-30	0	multi-exon	FALSE	canonical	3	26	junction_1	29.5	99	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAGTGTACATTTTTAT	NA	False	NA	NA	False	AATAAA	-19	NA	11171638	10995960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10996326_11047019_11047189_11171421
transcript_30971.nnic	chr12	-	727	5	Fusion	ENSG00000111215.12_ENSG00000231887.8	novel	563	4	NA	NA	-12	0	multi-exon	FALSE	canonical	1	5	junction_4	8.8423695919137	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGATTGTTGCTTCTCT	NA	False	NA	2	True	AATAAA	-18	NA	11171620	10845848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_10845951_10847044_10847368_10848371_10848408_10973654_10973722_11171421
transcript_30974.known	chr12	-	1662	5	FSM	ENSG00000212127.6	ENST00000381852.4	1662	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	34.5714839137692	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTTTGCTGTTTATTA	NA	False	NA	NA	False	AATAAA	-20	NA	11171573	10937407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_10938578_10973654_10973722_11034781_11034886_11047019_11047189_11171421
transcript_30976.known	chr12	+	4823	1	FSM	ENSG00000256537.5	ENST00000622602.2	4823	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1367	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTTTATGGTATTTTTT	NA	False	NA	8	True	AATAAA	-20	NA	11171193	11176016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_11171200_11176000
transcript_30983.known	chr12	+	1897	6	FSM	ENSG00000121380.12	ENST00000308721.9	1897	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.99332590941915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	12070922	True	NA	NA	False	AATAAA	-25	NA	12070938	12099695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12071138_12079298_12079739_12087212_12087387_12090778_12090850_12094663_12094931_12098949
transcript_30985.nic	chr12	+	1015	4	ISM	ENSG00000121380.12	ENST00000396367.5	1886	6	15666	322	7835	-311	3prime_fragment	FALSE	canonical	2	5	junction_3	1.69967317119759	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGTTTCTAGTACTATT	12087033	True	NA	18	True	GATAAA	-18	NA	12087133	12099373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_12087387_12090778_12090850_12094663_12094931_12098949
transcript_30986.nic	chr12	+	1337	4	ISM	ENSG00000121380.12	ENST00000396367.5	1886	6	15666	0	7835	0	3prime_fragment	FALSE	canonical	2	5	junction_3	1.69967317119759	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTCTTCTGATTAGTAA	12087033	True	NA	NA	False	AATAAA	-25	NA	12087133	12099695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_12087387_12090778_12090850_12094663_12094931_12098949
transcript_30987.known	chr12	+	561	2	FSM	ENSG00000121380.12	ENST00000466531.5	561	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTAGTGCTTGTACTG	12070922	True	NA	NA	False	AATAAA	-21	NA	12070938	12078067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12071138_12077705
transcript_30989.known	chr12	-	5532	4	FSM	ENSG00000111261.14	ENST00000535902.6	5532	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	5.35412613473634	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGAGTATTCTATGATTTA	-12350056	True	NA	NA	False	AATAAA	-25	NA	12350242	12326055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12330959_12338419_12338561_12343091_12343415_12350077
transcript_30991.known	chr12	-	1540	2	FSM	ENSG00000205791.4	ENST00000381800.4	1543	2	0	3	0	-3	multi-exon	FALSE	canonical	2	2	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATAGTCTGTCGCATCAAC	NA	False	NA	-2	True	AATAAA	-17	NA	12357067	12355405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12356806_12356927
transcript_30997.known	chr12	+	580	4	FSM	ENSG00000165714.11	ENST00000542728.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	37.1154355431208	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGGCCTGCCTGGGGCTGGG	12355246	True	NA	NA	False	NA	NA	NA	12357078	12465783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12357119_12361205_12361350_12435627_12435786_12465545
transcript_31.known	ERCC-00071	+	626	1	FSM	ERCC-00071A	DQ883654	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	721	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00071_+_0_600
transcript_31002.known	chr12	+	6422	4	FSM	ENSG00000165714.11	ENST00000314565.9	6422	4	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_2	2.86744175568088	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTCCAGGACAATGCTG	12355245	True	NA	NA	False	AATAAA	-27	NA	12357077	12471233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12357510_12361205_12361350_12435627_12435786_12465545
transcript_31008.known	chr12	+	3770	4	FSM	ENSG00000111269.3	ENST00000228865.3	3770	4	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	6.97614984548545	132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGTGTTTGACTATTGT	12609362	True	NA	7	True	ATTAAA	-18	NA	12611875	12645108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12612188_12635776_12635975_12637569_12637715_12641993
transcript_3101.known	chr1	-	1443	5	FSM	ENSG00000117632.23	ENST00000455785.7	1443	5	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_4	395.159777811457	51007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTGTGAAATGACTAAAG	-25847893	True	NA	-43	True	AATAAA	-23	NA	25906419	25900115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25906388
transcript_31016.known	chr12	-	553	4	FSM	ENSG00000183150.8	ENST00000540796.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	53.7649204097492	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACCCGGGGAAGTGGCC	-12695940	True	NA	NA	False	NA	NA	NA	12696207	12662270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12662471_12684350_12684508_12695458_12695512_12696064
transcript_3102.known	chr1	-	1712	5	FSM	ENSG00000117632.23	ENST00000399728.5	1712	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	1571.22730691648	11728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTCCTGTGAAATGACTAA	-25906142	False	NA	-45	True	AATAAA	-21	NA	25906153	25900117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25901683_25903640_25903814_25904663_25904739_25905851
transcript_31022.known	chr12	-	1751	2	FSM	ENSG00000183150.8	ENST00000540510.1	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTTGATTAATGATTCA	-12683390	True	NA	NA	False	CATAAA	-17	NA	12684521	12660890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12662471_12684350
transcript_31023.known	chr12	+	2411	3	FSM	ENSG00000111276.12	ENST00000228872.9	2411	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	7.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTGAGTCAAATTGTAA	12715731	True	NA	13	True	AATAAA	-18	NA	12717367	12722369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12718315_12718824_12718955_12721035
transcript_31024.known	chr12	+	2375	15	FSM	ENSG00000178878.13	ENST00000534843.1	2375	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	304.541743393886	1980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGATTCTAACTCCTTAA	12725771	True	NA	11	True	AATAAA	-17	NA	12725928	12829975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12726097_12726296_12726374_12812260_12812441_12813206_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_31025.nnic	chr12	+	1110	3	NNC	ENSG00000178878.13	novel	574	4	NA	NA	-113	-64115	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCTATTCCATTTTAC	12725646	True	NA	NA	False	AATAAA	-19	NA	12725803	12727351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_12726097_12726296_12726374_12726611
transcript_3103.known	chr1	-	2947	4	FSM	ENSG00000117632.23	ENST00000465604.1	2947	4	0	0	0	0	multi-exon	FALSE	canonical	3	2927	junction_3	438.453595669548	758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGTGACTTCTTTTG	-25847891	True	NA	-15	True	AATAAA	-17	NA	25906417	25900567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25901088_25901490_25903814_25904663_25904739_25906388
transcript_31030.known	chr12	+	1817	12	FSM	ENSG00000213782.7	ENST00000358007.7	1817	12	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	40.4593459868786	967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAACTCCTTAAAGACCT	12809395	True	NA	17	True	AATAAA	-23	NA	12813345	12829981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12823869_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_31032.known	chr12	+	1698	11	FSM	ENSG00000213782.7	ENST00000352940.8	1698	11	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	205.716528261586	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	NA	False	NA	15	True	AATAAA	-21	NA	12813315	12829979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12823320_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_31033.known	chr12	+	2357	11	FSM	ENSG00000213782.7	ENST00000545038.5	2357	11	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	42.1160302022876	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTCTAACTCCTTAAAGAC	12809403	True	NA	15	True	AATAAA	-21	NA	12813353	12829979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12813455_12814130_12814225_12821207_12821397_12821654_12821727_12821964_12822084_12822660_12822733_12823202_12824017_12824539_12824678_12825999_12826071_12827245_12827376_12829422
transcript_31038.nnic	chr12	+	577	3	NNC	ENSG00000213782.7	novel	1044	3	NA	NA	-9	-3254	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_2	375.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGCACTGACCTTTA	12809386	True	NA	NA	False	AATAAA	-16	NA	12813336	12818083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_12813455_12814130_12814225_12817718
transcript_3104.known	chr1	-	3487	11	FSM	ENSG00000158006.14	ENST00000374282.8	3487	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_10	9.37869927015468	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTTGTTGGCTTGCTCTT	-25997147	True	NA	-7	True	AAAAAG	-16	NA	25998063	25959766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_25962084_25972557_25972713_25974479_25974651_25976681_25976774_25982363_25982478_25983945_25984088_25984459_25984529_25988230_25988328_25989447_25989602_25990726_25990864_25998024
transcript_31040.known	chr12	+	609	1	FSM	ENSG00000234498.3	ENST00000459725.1	609	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGCCCAATAAAGACTGTT	NA	False	NA	NA	False	AATACA	-33	NA	12875498	12876107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12875500_12876100
transcript_31041.known	chr12	+	6582	4	FSM	ENSG00000013588.9	ENST00000014914.6	6582	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGAGTCAGGTGGTAAAA	12891526	True	NA	NA	False	AATAAA	-15	NA	12891561	12917937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12891665_12908242_12909172_12912083_12912143_12912446
transcript_31042.known	chr12	-	1159	4	FSM	ENSG00000013583.10	ENST00000014930.9	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_2	2.35702260395516	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACAAATCATAAGTGTAATT	-12995043	True	NA	-8	True	AATAAA	-23	NA	13000265	12974869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12975480_12987151_12987333_12989276_12989416_13000036
transcript_31044.known	chr12	-	865	4	FSM	ENSG00000013583.10	ENST00000647702.1	865	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	129.887985929758	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGATAGACCAGAAAAATCC	-12994950	True	NA	NA	False	AATACA	-43	NA	13000172	12975066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_12975480_12987151_12987333_12989276_12989412_13000036
transcript_31046.known	chr12	+	740	3	FSM	ENSG00000247498.11	ENST00000543515.8	758	3	18	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATGACAACCTTCTGTC	12927698	True	NA	NA	False	AATACA	-28	NA	12927729	12980566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12927804_12979523_12979623_12979999
transcript_31048.known	chr12	+	838	4	FSM	ENSG00000247498.11	ENST00000660059.1	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTATGACAACCTTC	12927695	True	NA	NA	False	AATACA	-24	NA	12927726	12980562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_12927804_12966758_12966858_12979523_12979623_12979999
transcript_31049.nnic	chr12	+	446	3	NNC	ENSG00000255621.1	novel	2403	5	NA	NA	-26	-16178	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACCTTCTTTGATTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	13000424	13024501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_13000482_13022013_13022162_13024260
transcript_31050.nic	chr12	+	1077	3	ISM	ENSG00000255621.1	ENST00000543321.1	2403	5	-25	20208	-25	-20208	5prime_fragment	FALSE	canonical	2	3	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGTGTGAAGGAGGATTAT	13000145	True	NA	NA	False	AATAAA	-18	NA	13000425	13020471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_13000482_13008094_13008156_13019511
transcript_31054.known	chr12	-	1628	6	FSM	ENSG00000111305.19	ENST00000396302.7	1628	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	1.95959179422654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATCTAGTTATTGGTCTG	NA	False	NA	NA	False	AGTAAA	-28	NA	13095806	13084576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_13085244_13087151_13087264_13087906_13088060_13088737_13088910_13090502_13090819_13095598
transcript_31055.nnic	chr12	-	681	3	NNC	ENSG00000111305.19	novel	1422	7	NA	NA	7711	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTCTCTTGAGCATGG	-13087926	False	NA	0	True	NA	NA	NA	13087937	13084824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_13085244_13087151_13087264_13087787
transcript_31056.nic	chr12	-	1162	3	ISM	ENSG00000111305.19	ENST00000396302.7	1628	6	7269	248	7111	0	3prime_fragment	FALSE	canonical	1	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCGTCTCTTGAGCATGG	NA	False	NA	0	True	NA	NA	NA	13088537	13084824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_13085244_13087151_13087264_13087906
transcript_31057.known	chr12	+	4711	13	FSM	ENSG00000084444.14	ENST00000197268.13	4711	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	8.15603048874471	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	13043041	True	NA	NA	False	AATAAA	-18	NA	13044380	13083449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624
transcript_31058.known	chr12	+	2623	14	FSM	ENSG00000084444.14	ENST00000416494.6	2623	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	19.1928857628374	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACTTGTGTGCCATTCTC	13043041	True	NA	NA	False	AATAAA	-18	NA	13044380	13083449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_13044441_13055550_13055947_13058450_13058550_13061574_13061764_13062844_13062976_13066639_13066788_13067154_13067297_13068303_13068448_13068629_13068712_13071240_13071397_13076025_13076144_13079788_13080010_13080624_13080915_13083002
transcript_31061.known	chr12	+	8774	15	FSM	ENSG00000171681.13	ENST00000536444.5	8774	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	81.5636723858191	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTGAGTACTCTGATTAA	14356397	True	NA	17	True	AATAAA	-18	NA	14365728	14502931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002_14481186_14496230_14496344_14497653
transcript_31062.known	chr12	+	4887	13	FSM	ENSG00000171681.13	ENST00000543189.5	4887	13	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_2	78.4457969272768	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCCACTGACTCAAATGTT	14356361	True	NA	7	True	ATTAAA	-19	NA	14365692	14482653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14365828_14423908_14425474_14434339_14434424_14436105_14436252_14438129_14438268_14446987_14447054_14456560_14456635_14457206_14457296_14460494_14461134_14466525_14466591_14475889_14475969_14478316_14478473_14481002
transcript_31075.known	chr12	-	1960	11	FSM	ENSG00000121316.11	ENST00000240617.10	1960	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_9	42.4807015007992	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGACTTTGTTGT	-14567868	False	NA	-9	True	AATAAA	-23	NA	14567883	14503660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14503955_14506161_14506269_14506932_14507119_14511259_14511401_14511510_14511712_14535658_14535804_14536569_14536711_14540763_14540903_14542207_14542292_14553192_14553413_14567581
transcript_31083.nnic	chr12	+	670	4	NNC	ENSG00000214772.2	novel	657	5	NA	NA	41751	-24159	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.52447456836295	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTTAATGTGTAATGA	14707395	False	NA	NA	False	AAGAAA	-1	NA	14707405	14733804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_14707508_14708103_14708223_14718034_14718076_14733396
transcript_31085.nnic	chr12	+	983	3	NNC	ENSG00000214772.2	novel	657	5	NA	NA	42034	-24159	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	8.5	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTTAATGTGTAATGA	14707663	False	NA	NA	False	AAGAAA	-1	NA	14707688	14733804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_14708223_14718034_14718076_14733396
transcript_3109.nnic	chr1	-	871	3	Antisense	novelGene_ENSG00000158008.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGTGCAGCTCCCT	-26035316	True	NA	NA	False	AGTAAA	-18	NA	26035428	26024927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_26025188_26028037_26028125_26034904
transcript_31092.nnic	chr12	-	847	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_2	23	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-14709802	True	NA	-3	True	AATAAA	-22	NA	14710299	14705456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14708056_14708159_14710010
transcript_31094.nnic	chr12	-	1048	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	17	93	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-14710400	False	NA	-3	True	AATAAA	-22	NA	14710443	14705456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14708056_14708216_14710010
transcript_31096.nnic	chr12	-	1204	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	88	junction_1	62	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-14710427	False	NA	-3	True	AATAAA	-22	NA	14710470	14705456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14708056_14708345_14710010
transcript_31100.nnic	chr12	-	1342	3	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	104	junction_1	54	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-14710427	False	NA	-3	True	AATAAA	-22	NA	14710470	14705456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14706051_14708056_14708345_14710010
transcript_31102.nnic	chr12	-	781	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	101	junction_1	0	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-14710298	False	NA	-9	True	AATAAA	-16	NA	14710341	14705462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14705913_14710010
transcript_31104.nnic	chr12	-	2326	2	Antisense	novelGene_ENSG00000214772.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	212	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTGTCATCCCTACT	-14710427	False	NA	19	True	NA	NA	NA	14710470	14706478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_14708345_14710010
transcript_31108.nnic	chr12	-	664	3	NNC	ENSG00000197837.4	novel	448	2	NA	NA	15	26859	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGAAATCAGCTTTCTTT	-14769994	False	NA	NA	False	AATAAA	-41	NA	14770155	14741139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_14741477_14768938_14769010_14769899
transcript_31111.known	chr12	-	810	2	FSM	ENSG00000197837.4	ENST00000541592.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTGTTAGTTTAATTTCT	-14770009	False	NA	NA	False	CATAAA	-23	NA	14770170	14768924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14769464_14769899
transcript_31112.known	chr12	+	3107	2	FSM	ENSG00000246705.5	ENST00000501744.2	3107	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCATTTTCGTTGTTTTT	14757874	False	NA	NA	False	ATTAAA	-16	NA	14774581	14778002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14774977_14775290
transcript_31113.known	chr12	+	644	1	FSM	ENSG00000246705.5	ENST00000544848.3	620	1	-22	-2	-22	2	mono-exon	FALSE	NA	NA	NA	NA	NA	7100	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTCGAGAGAGCTGTGTAG	14757675	True	NA	27	True	AATAAA	-17	NA	14774382	14775026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14774400_14775000
transcript_31116.known	chr12	-	4581	12	FSM	ENSG00000084463.8	ENST00000261167.7	4581	12	0	0	0	0	multi-exon	FALSE	canonical	3	1127	junction_1	64.8949564442479	1041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGGAAGGGTTATTTATA	-14789369	True	NA	-1	True	ATTAAA	-18	NA	14803478	14784581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14787499_14788950_14789134_14790455_14790750_14791168_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_31126.nic	chr12	-	1171	9	ISM	ENSG00000084463.8	ENST00000261167.7	4581	12	-37	6640	-29	-533	5prime_fragment	FALSE	canonical	3	1179	junction_1	49.6682745824737	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAACATGAAGGAACTGA	-14789406	True	NA	18	True	AAGAAA	-3	NA	14803515	14791221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_14791271_14793730_14793923_14794536_14794737_14794970_14795105_14796806_14797004_14799634_14799729_14800751_14800784_14801319_14801429_14803351
transcript_31136.known	chr12	-	554	2	FSM	ENSG00000084463.8	ENST00000543316.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1274	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTATGAAACATTAAAC	-14789367	True	NA	NA	False	NA	NA	NA	14803476	14800999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14801429_14803351
transcript_31137.known	chr12	+	1586	2	FSM	ENSG00000182993.5	ENST00000330828.3	1586	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAGTCTTTGGTTCTCA	14803335	True	NA	NA	False	AAGAAA	-26	NA	14803669	14824415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_14803752_14822911
transcript_31138.known	chr12	-	1174	6	FSM	ENSG00000111348.9	ENST00000228945.9	1174	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.22710574513201	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTCTGGCTGAGACCTT	NA	False	NA	-21	True	AATAAA	-13	NA	14961601	14942030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14949801_14949886_14950531_14950725_14961536
transcript_31139.known	chr12	-	590	4	FSM	ENSG00000111348.9	ENST00000539131.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGTCCCTAGAACAAGAGG	-14948858	True	NA	NA	False	NA	NA	NA	14948896	14942369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_14942722_14944775_14944840_14947872_14947950_14948799
transcript_3114.known	chr1	+	4113	3	FSM	ENSG00000175087.10	ENST00000374269.2	4113	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTGCTTTAGTGGCTC	26111339	True	NA	NA	False	AATAAA	-35	NA	26111823	26125555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26111916_26114291_26114594_26121836
transcript_31141.known	chr12	-	2264	5	FSM	ENSG00000134533.6	ENST00000256953.6	2264	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGGGTAATCTTTCTTG	-15221334	True	NA	-1	True	AATAAA	-25	NA	15221417	15107782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_15109518_15111343_15111418_15121062_15121120_15217428_15217604_15221194
transcript_31142.known	chr12	+	2095	9	FSM	ENSG00000151490.15	ENST00000543886.6	2095	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.61535599791501	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTGTTAGTTCATTT	15322507	False	NA	NA	False	TATAAA	-22	NA	15322521	15517067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15322802_15483973_15484248_15497244_15497404_15499441_15499595_15501619_15502064_15503907_15504070_15508570_15508768_15515497_15515619_15516762
transcript_31143.known	chr12	-	3873	21	FSM	ENSG00000151491.14	ENST00000644374.1	3873	21	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	5.9268457040824	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATGGTTTCTGTCTCATT	-15788709	True	NA	-23	True	AATAAA	-21	NA	15789388	15620161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_15621431_15623157_15623288_15624226_15624408_15631441_15631665_15640702_15640847_15641721_15641831_15647126_15647261_15650822_15651007_15654144_15654294_15658078_15658154_15658496_15658586_15660613_15660741_15662025_15662100_15665755_15665893_15666439_15666523_15669386_15669537_15669663_15669826_15670855_15670924_15681225_15681303_15682892_15682973_15789160
transcript_31150.known	chr12	+	1874	10	FSM	ENSG00000023734.11	ENST00000419869.7	1874	10	0	0	0	0	multi-exon	FALSE	canonical	3	2165	junction_5	124.763282031253	7083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	15855058	True	NA	88	True	AATAAA	-18	NA	15882386	15903478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15882820_15883540_15883677_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_31155.known	chr12	+	1698	9	FSM	ENSG00000023734.11	ENST00000541731.1	1698	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	774.393220124634	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGTTGTCTAAATAAAA	15855062	True	NA	52	True	NA	NA	NA	15882390	15903442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15882820_15889927_15890010_15890596_15890670_15894046_15894144_15895358_15895497_15897881_15898019_15899903_15900054_15900946_15901013_15902916
transcript_31159.known	chr12	+	676	2	FSM	ENSG00000023734.11	ENST00000539887.1	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	2504	junction_1	0	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTTTGGTTTTTTTGGG	15900742	False	NA	88	True	AATAAA	-18	NA	15900898	15903478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15901013_15902916
transcript_31166.known	chr12	+	1644	9	FSM	ENSG00000023697.13	ENST00000428559.7	1644	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	17.9230124421092	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGAATCTCTCTAGTT	15908597	True	NA	NA	False	ATTAAA	-25	NA	15911331	16037381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_31175.known	chr12	+	854	8	FSM	ENSG00000023697.13	ENST00000532964.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	95.1415701328654	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCAGTTCCAGAAAAGTT	15908628	True	NA	NA	False	NA	NA	NA	15911362	16036751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_15911415_15956935_15957034_15958187_15958336_15959828_15959925_15962812_15962948_16032541_16032655_16036231_16036382_16036689
transcript_31176.nic	chr12	+	1447	8	NIC	ENSG00000023697.13	novel	1644	9	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	91.1840480141395	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGTTCCTATAGTTTA	15908545	True	NA	NA	False	ATTAAA	-12	NA	15911279	16037280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_15911415_15956935_15957034_15959828_15959925_15962812_15962948_15982307_15982437_16032541_16032655_16036231_16036382_16036689
transcript_3118.known	chr1	+	638	3	FSM	ENSG00000142684.9	ENST00000374266.7	638	3	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	9	4465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166326	True	NA	19	True	AATAAA	-19	NA	26169907	26170873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26170184_26170417_26170481_26170574
transcript_3119.known	chr1	+	698	2	FSM	ENSG00000142684.9	ENST00000270812.6	698	2	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCTCCAACTCTAACTT	26166360	True	NA	19	True	AATAAA	-19	NA	26169941	26170873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26170184_26170417
transcript_3120.known	chr1	+	2535	21	FSM	ENSG00000142675.18	ENST00000361530.11	2535	21	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_8	12.6509881037016	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	26176095	True	NA	13	True	AATAAA	-18	NA	26177490	26189884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183415_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_3121.known	chr1	+	2538	21	FSM	ENSG00000142675.18	ENST00000374253.9	2538	21	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	22.0337808829987	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTCTACATGTAACTTTA	26176113	True	NA	13	True	AATAAA	-18	NA	26177508	26189884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26177600_26180452_26180611_26180714_26180897_26181856_26181942_26182360_26182403_26182479_26182585_26183196_26183257_26183345_26183436_26183728_26183831_26184070_26184142_26184213_26184288_26184400_26184508_26184584_26184613_26185013_26185187_26187167_26187242_26187410_26187483_26188233_26188308_26188441_26188504_26188597_26188698_26188771_26188954_26189278
transcript_31211.known	chr12	+	365	4	FSM	ENSG00000008394.13	ENST00000540126.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1688.77891454809	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATTATTCCATTTCTT	16347760	False	NA	1	True	NA	NA	NA	16347796	16363814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347899_16354230_16354379_16357604_16357700_16363794
transcript_31216.known	chr12	+	546	3	FSM	ENSG00000008394.13	ENST00000540056.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	78.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTTAAGAATTCTGTACT	16347741	True	NA	NA	False	AGTAAA	-43	NA	16347777	16364071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347899_16354230_16354379_16363794
transcript_31218.known	chr12	+	925	4	FSM	ENSG00000008394.13	ENST00000396210.8	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	3342	junction_1	189.536862436367	43923	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTGGTTTTATTTTT	16277342	True	NA	21	True	AATAAA	-16	NA	16347644	16364410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16354230_16354379_16357604_16357700_16363794
transcript_31219.known	chr12	+	406	4	FSM	ENSG00000008394.13	ENST00000543076.5	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_2	1578.61929827583	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGGCTTACAGGTTGCT	16277342	True	NA	NA	False	AATAGA	-37	NA	16347644	16363999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16354230_16354271_16357604_16357700_16363794
transcript_31220.known	chr12	+	551	2	FSM	ENSG00000008394.13	ENST00000537878.5	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	3342	junction_1	0	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGTATTTTCAGCTCTA	16277351	True	NA	NA	False	AAAACA	-19	NA	16347653	16354724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_16347711_16354230
transcript_31246.known	chr12	-	2403	5	FSM	ENSG00000048540.16	ENST00000453727.6	2403	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	51.3243363327769	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGCTTCATGGTTAGGAG	-16606381	False	NA	67	True	AAGAAA	-37	NA	16606440	16549374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16606338
transcript_31247.known	chr12	-	587	5	FSM	ENSG00000048540.16	ENST00000536172.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	60.4498759303938	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGATCTATCAACATCAC	-16606689	True	NA	NA	False	AATGAA	-23	NA	16607185	16551227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600713_16600869_16606065_16606133_16607046
transcript_31258.nic	chr12	-	850	5	NIC	ENSG00000048540.16	novel	587	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	57.6340827982887	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGTTGAATGTTTATTATT	-16606710	True	NA	-49	True	AATAAA	-41	NA	16607206	16551044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065_16606133_16607046
transcript_3126.known	chr1	+	624	3	FSM	ENSG00000142675.18	ENST00000465415.1	624	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	7.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTGGCCAACATGGTGAA	26176107	True	NA	NA	False	NA	NA	NA	26177502	26181083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26177600_26180452_26180611_26180714
transcript_31262.known	chr12	-	3759	4	FSM	ENSG00000048540.16	ENST00000320122.10	3759	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	57.4340201158396	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTTTTTTACATTTGGA	-16605320	False	NA	-11	True	AATAAA	-20	NA	16605379	16548423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16604864
transcript_31263.known	chr12	-	3393	4	FSM	ENSG00000048540.16	ENST00000537304.6	3393	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	33.5062183283442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTGCACTTAATTGGC	-16606103	False	NA	-4	True	AATAAA	-16	NA	16606162	16548371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_16551328_16560412_16560539_16600654_16600869_16606065
transcript_3127.known	chr1	+	1867	10	FSM	ENSG00000188782.9	ENST00000456354.7	1867	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.34652356466032	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGACTGGTGG	26190576	True	NA	NA	False	AATAAA	-15	NA	26190601	26202964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26190841_26191286_26191431_26193786_26193889_26197685_26197784_26197956_26198078_26198285_26198420_26199883_26200059_26200829_26201042_26201353_26201520_26202488
transcript_31279.known	chr12	+	4238	26	FSM	ENSG00000052126.15	ENST00000299275.10	4238	26	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_5	35.5696499842211	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTAGAATTTTTGTT	19129646	False	NA	12	True	AATAAA	-17	NA	19129793	19376400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515_19274984_19283279_19283746_19287472_19287557_19320561_19320625_19322309_19322391_19322517_19322668_19336514_19336617_19343322_19343435_19345841_19345889_19348398_19348520_19353883_19354003_19358227_19358438_19359411_19359547_19361581_19361707_19365963_19366110_19369692_19369799_19375530
transcript_31288.nic	chr12	+	1069	11	ISM	ENSG00000052126.15	ENST00000429027.7	4797	32	-55	101783	-55	8800	5prime_fragment	FALSE	canonical	1	1	junction_9	117.659508753012	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAAATGAGCAAAATTG	19129339	False	NA	-9	True	ATTAAA	-27	NA	19129677	19274617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19270187_19270206_19274515
transcript_3129.known	chr1	+	1078	4	FSM	ENSG00000236155.7	ENST00000451482.2	1083	4	5	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	16.739839372653	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	NA	False	NA	NA	False	AATAAA	-44	NA	26225319	26229840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26225704_26227403_26227556_26227793_26227997_26229501
transcript_31290.nic	chr12	+	1051	10	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-118	99051	-55	8800	5prime_fragment	FALSE	canonical	3	250	junction_5	24.6891789161883	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGGAAATGAGCAAAATTG	19129339	False	NA	-9	True	ATTAAA	-27	NA	19129677	19274617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749_19265851_19269769_19269886_19274515
transcript_31294.nic	chr12	+	1320	8	ISM	ENSG00000052126.15	ENST00000538714.5	6487	28	-118	107331	-55	520	5prime_fragment	FALSE	canonical	3	250	junction_5	26.4111911963123	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATACTAGCCGGGCATGG	19129339	False	NA	NA	False	AAAACA	-30	NA	19129677	19266337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_19129889_19130050_19130131_19132392_19132451_19253939_19254024_19255044_19255166_19257432_19257538_19260948_19261022_19265749
transcript_31297.known	chr12	+	1954	4	FSM	ENSG00000052126.15	ENST00000540972.5	1954	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	149.217961385351	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTTGGGTTCATTACT	19124398	True	NA	NA	False	AATAAA	-27	NA	19129751	19202003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19129889_19130050_19130131_19132392_19132451_19200324
transcript_31298.nic	chr12	+	900	4	NIC	ENSG00000052126.15	novel	1954	4	NA	NA	-55	83	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	144.058630039609	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAGTTTGCTTTTTATC	19129339	False	NA	NA	False	ATTAAA	-25	NA	19129677	19207816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_19129889_19130050_19130131_19132392_19132451_19207265
transcript_31299.known	chr12	+	5099	9	FSM	ENSG00000139154.16	ENST00000398864.7	5099	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_8	28.2353391160793	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTTGTAACACTGCAGT	19439083	False	NA	NA	False	ATTAAA	-29	NA	19439673	19522239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086_19518114_19518674
transcript_3130.nnic	chr1	+	773	3	FSM	ENSG00000236155.7	ENST00000692018.1	935	3	158	4	153	0	multi-exon	FALSE	canonical	3	31	junction_1	7	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACATTTTGTTGTCTTTA	NA	False	NA	NA	False	AATAAA	-44	NA	26225472	26229840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26225704_26227793_26227997_26229501
transcript_31300.known	chr12	+	5830	8	FSM	ENSG00000139154.16	ENST00000266508.14	5830	8	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	15.9808558939138	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGGACATTTTGCATTTG	19431121	True	NA	NA	False	ATTAAA	-17	NA	19439491	19522227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_19440371_19462509_19462718_19473247_19473356_19493799_19493987_19500096_19500222_19512397_19512466_19514670_19514785_19518086
transcript_31306.known	chr12	-	483	3	FSM	ENSG00000287075.2	ENST00000656578.2	486	3	0	3	0	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCCATGTTTCAGGTAC	NA	False	NA	NA	False	AATAAA	-18	NA	20109893	20104589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_20104788_20105672_20105838_20109773
transcript_3131.known	chr1	+	3935	14	FSM	ENSG00000130695.16	ENST00000252992.8	3935	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_13	50.6650446122584	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228947	True	NA	15	True	AATAAA	-15	NA	26234201	26278808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277132
transcript_31317.nnic	chr12	+	1145	4	NNC	ENSG00000134538.3	novel	2787	15	NA	NA	83407	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0.471404520791032	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGATTGTCAAACAACA	NA	False	NA	NA	False	AATAAA	-20	NA	21214600	21239796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_21214745_21222299_21222365_21224721_21224840_21238978
transcript_31319.nnic	chr12	+	1517	4	NNC	ENSG00000134538.3	novel	2787	15	NA	NA	83427	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2.16024689946929	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGTGATTGTCAAACAACA	21214495	True	NA	NA	False	AATAAA	-20	NA	21214620	21239796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_21215137_21222299_21222365_21224721_21224840_21238978
transcript_3132.known	chr1	+	3934	14	FSM	ENSG00000130695.16	ENST00000451429.8	3934	14	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_13	21.8964750885108	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTCAGTTTTCCATACCCT	26228945	True	NA	15	True	AATAAA	-15	NA	26234199	26278808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26234311_26239761_26239839_26244165_26244319_26255170_26255866_26257596_26257731_26258142_26258261_26259616_26259803_26268482_26268636_26269459_26269615_26271013_26271108_26272020_26272072_26274963_26275072_26276534_26276761_26277135
transcript_31329.nnic	chr12	-	1483	10	NIC	ENSG00000084453.17	novel	7682	16	NA	NA	16	8929	combination_of_known_splicesites	FALSE	canonical	2	6	junction_9	7.24185366080014	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTTTTCTAATGAATGT	-21394977	True	NA	NA	False	AATAAA	-19	NA	21395421	21295593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21295793_21297403_21297569_21300347_21300570_21301170_21301270_21304426_21304574_21306881_21306989_21314548_21314682_21318781_21318924_21334587_21334705_21395269
transcript_31340.known	chr12	-	2572	16	FSM	ENSG00000004700.16	ENST00000421138.6	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_15	58.3092902832244	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATCAAGGATGTCCAATCT	-21496066	True	NA	NA	False	NA	NA	NA	21501551	21469801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501412
transcript_31341.nic	chr12	-	3503	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	74.4469982978196	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496155	True	NA	-1	True	AATAAA	-23	NA	21501640	21468909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501462
transcript_31342.nic	chr12	-	3481	16	NIC	ENSG00000004700.16	novel	2572	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_15	81.0419370175439	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496151	True	NA	-1	True	AATAAA	-23	NA	21501636	21468909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501216_21501480
transcript_31351.nic	chr12	-	3530	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_14	76.9029337833726	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496178	True	NA	-1	True	AATAAA	-23	NA	21501663	21468909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501412
transcript_31352.nic	chr12	-	3482	15	NIC	ENSG00000004700.16	novel	3745	15	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_14	79.3344766395636	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21501641	False	NA	-1	True	AATAAA	-23	NA	21501665	21468909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501462
transcript_31359.known	chr12	+	4075	12	FSM	ENSG00000121350.16	ENST00000240651.14	4075	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	3.82466981235684	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCGTTACTTTTTTTT	21437183	True	NA	NA	False	AATAAA	-36	NA	21437654	21471250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21461024_21461155_21462007_21462121_21462739_21462863_21467480_21467619_21468505
transcript_31365.nic	chr12	+	1111	8	NIC	ENSG00000121350.16	novel	4075	12	NA	NA	3	1050	combination_of_known_junctions	FALSE	canonical	2	5	junction_7	7.79586494265272	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATGTTGATATTTTGA	21437146	True	NA	NA	False	AGTAAA	-16	NA	21437617	21457112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_21437815_21440367_21440449_21445346_21445467_21449562_21449692_21452080_21452155_21455131_21455293_21455994_21456096_21456864
transcript_31368.known	chr12	-	1054	7	FSM	ENSG00000004700.16	ENST00000314748.10	1054	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	99.6333556373344	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGTCAAGACTAGAGAAAG	-21501645	False	NA	NA	False	AAAAAG	-10	NA	21501669	21483476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169_21501373_21501462
transcript_31369.known	chr12	+	650	2	FSM	ENSG00000121350.16	ENST00000538615.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTATTGAGTTAATGAT	NA	False	NA	NA	False	AATAAA	-7	NA	21467289	21468826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21467619_21468505
transcript_31370.known	chr12	-	3745	15	FSM	ENSG00000004700.16	ENST00000444129.7	3745	15	0	0	0	0	multi-exon	TRUE	canonical	3	233	junction_14	33.0316020606612	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTTATGTTTTTATATTT	-21496150	True	NA	-1	True	AATAAA	-23	NA	21501635	21468909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21470347_21470968_21471099_21471427_21471648_21473550_21473643_21474840_21474980_21475467_21475586_21475675_21475825_21476910_21476993_21477802_21477970_21483375_21483575_21486478_21486586_21490198_21490379_21491518_21491717_21499554_21499616_21501169
transcript_31371.known	chr12	-	578	4	FSM	ENSG00000004700.16	ENST00000536964.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	120.903083316992	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACTATTAACGTAACAA	-21496170	True	NA	NA	False	TTTAAA	-27	NA	21501655	21490302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21490379_21491518_21491717_21499554_21499616_21501412
transcript_31374.known	chr12	+	562	6	FSM	ENSG00000111711.10	ENST00000542194.1	562	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	227.415918528145	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTATAAAGTCATTTGAAG	21499105	True	NA	NA	False	TTTAAA	-11	NA	21501852	21515746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21506884_21506977_21507116_21507152_21508382_21508562_21512294_21512377_21515668
transcript_31377.known	chr12	+	1210	6	FSM	ENSG00000111711.10	ENST00000539025.5	1210	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	221.069581806272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATAAAACTTTTGTGG	21499081	True	NA	-6	True	NA	NA	NA	21501828	21516239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21506884_21506977_21507943_21508110_21508382_21508562_21512294_21512377_21515668
transcript_31382.known	chr12	+	3253	5	FSM	ENSG00000111711.10	ENST00000229314.10	3253	5	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	69.3289261419792	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGACTCCCAGTTTGTATA	21499041	True	NA	23	True	AATAAA	-37	NA	21501788	21518408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21506884_21506977_21508382_21508562_21512294_21512377_21515668
transcript_31387.known	chr12	+	700	4	FSM	ENSG00000111711.10	ENST00000545093.5	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	225.531963736111	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCATCCATAGGCATTTG	21499069	True	NA	37	True	NA	NA	NA	21501816	21516062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21506884_21506977_21512294_21512377_21515668
transcript_3139.known	chr1	-	2043	16	NIC	ENSG00000158062.21	novel	1944	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	34.6288255006657	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	NA	False	NA	NA	False	AATAAA	-15	NA	26318363	26282283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591_26306705_26318046
transcript_31390.nnic	chr12	+	401	3	NNC	ENSG00000111711.10	novel	223	3	NA	NA	-12	334	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	254.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTTTTTATATTTAGC	21499021	True	NA	NA	False	ATTAAA	-16	NA	21501768	21508289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_21501949_21506884_21506977_21508160
transcript_31391.known	chr12	+	813	3	FSM	ENSG00000111711.10	ENST00000535593.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	224	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACATGGTTAAAATAAAAC	21499033	True	NA	-14	True	ATTAAA	-45	NA	21501780	21516231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21501949_21512294_21512377_21515668
transcript_31395.known	chr12	+	2280	6	FSM	ENSG00000134548.11	ENST00000256969.7	2280	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.63818119165458	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTATAACTTTCCAACT	NA	False	NA	NA	False	ATTAAA	-17	NA	21526295	21532947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21526479_21526885_21526967_21527134_21527193_21527726_21527790_21529000_21529085_21531136
transcript_31397.known	chr12	+	1826	3	FSM	ENSG00000134548.11	ENST00000535139.5	1826	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGCACCTGTCATTA	NA	False	NA	NA	False	ATTAAA	-17	NA	21527434	21532523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21527790_21529000_21529085_21531136
transcript_31399.known	chr12	+	1687	3	FSM	ENSG00000134548.11	ENST00000543800.5	1687	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATAGGCACCTGTCATTA	21527879	False	NA	NA	False	ATTAAA	-17	NA	21527935	21532523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_21528152_21529000_21529085_21531136
transcript_31417.known	chr12	-	1538	8	FSM	ENSG00000111716.14	ENST00000396076.5	1538	8	0	0	0	0	multi-exon	TRUE	canonical	3	202	junction_7	3998.15496223456	42106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTTCTGGGATTCCT	-21507589	True	NA	-25	True	AATAAA	-19	NA	21657794	21635341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21635710_21637070_21637195_21638352_21638471_21641951_21642126_21643934_21644109_21646898_21647017_21654542_21654678_21657467
transcript_31430.known	chr12	-	2274	3	FSM	ENSG00000121361.5	ENST00000240662.3	2274	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTGTAGTTTTGTGATT	-21774657	False	NA	NA	False	ATTAAA	-15	NA	21774706	21764954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_21766624_21773242_21773687_21774545
transcript_31437.known	chr12	+	1748	8	FSM	ENSG00000111726.13	ENST00000229329.7	1748	8	0	0	0	0	multi-exon	FALSE	canonical	3	1273	junction_3	116.186865673802	1915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAAACTGCCTTGTTGCTC	22032953	True	NA	20	True	AATAAA	-21	NA	22046217	22065668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22061280_22061453_22062280_22062435_22065120
transcript_31440.known	chr12	+	1575	7	FSM	ENSG00000111726.13	ENST00000534981.5	1575	7	0	0	0	0	multi-exon	TRUE	canonical	3	68	junction_5	510.032596997486	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTGTTGCTCTAGAAG	22032960	True	NA	26	True	AATAAA	-27	NA	22046224	22065674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22046564_22055148_22055292_22055454_22055611_22058566_22058701_22060831_22060927_22062280_22062435_22065120
transcript_31448.known	chr12	-	4436	25	FSM	ENSG00000111731.13	ENST00000333957.8	4436	25	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_24	28.3592712157574	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAATATTCCTAAATCTC	-22542439	True	NA	-13	True	AATAAA	-18	NA	22544546	22448582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_22449892_22453895_22454043_22456970_22457162_22469708_22469796_22470823_22470912_22471398_22471489_22471966_22472066_22472285_22472348_22472743_22472808_22474750_22474892_22478312_22478478_22482556_22482744_22484696_22484889_22490122_22490219_22493222_22493338_22506710_22506820_22513293_22513380_22517985_22518138_22523425_22523625_22524471_22524628_22525609_22525706_22527720_22527893_22535257_22535345_22544060_22544180_22544319
transcript_31455.known	chr12	+	7063	8	FSM	ENSG00000139163.16	ENST00000266517.9	7063	8	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_3	21.6823072798905	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATTCATAAATTTTATT	22621036	True	NA	NA	False	AATAAA	-37	NA	22625170	22690665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22643762_22644023_22659013_22659155_22661062_22661206_22671271_22671356_22673499_22673661_22684482_22684557_22684881
transcript_31459.known	chr12	+	910	3	FSM	ENSG00000139163.16	ENST00000672951.1	910	3	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_2	57.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTTCTTTACGTTGT	22621007	True	NA	22	True	ATTAAA	-23	NA	22625141	22644415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22643762_22644023_22644210
transcript_31461.known	chr12	+	1231	3	FSM	ENSG00000139163.16	ENST00000673496.1	1231	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	63	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTAGGGAAGGTCATTC	22625341	False	NA	NA	False	CATAAA	-41	NA	22625381	22657197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22643762_22644023_22656431
transcript_31464.nic	chr12	+	1717	3	ISM	ENSG00000139163.16	ENST00000538218.2	1659	9	-48	25196	2	0	5prime_fragment	FALSE	canonical	3	111	junction_2	12.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TACCTTTAAAAAAAAAAAAA	22621009	True	NA	NA	False	NA	NA	NA	22625143	22660027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_22625587_22643762_22644023_22659013
transcript_31465.known	chr12	+	617	2	FSM	ENSG00000139163.16	ENST00000545979.2	617	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGAAGGAGCAGTGGCT	22625316	False	NA	NA	False	ATTAAA	-27	NA	22625356	22626200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_22625587_22625813
transcript_31467.nic	chr12	+	734	2	ISM	ENSG00000256995.8	ENST00000629824.2	382	4	-95	179760	0	-23087	5prime_fragment	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAGAAGAAATCATTAA	22699699	True	NA	NA	False	NA	NA	NA	22699858	22709153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_22700095_22708655
transcript_31469.nnic	chr12	+	793	3	Fusion	ENSG00000256923.1_ENSG00000256995.8	novel	424	2	NA	NA	-95	0	multi-exon	TRUE	canonical	0	0	junction_1	1	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTTCTTCATATCAAGCCT	NA	False	NA	NA	False	NA	NA	NA	22699763	22743091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_22700095_22742543_22742633_22742718
transcript_3147.known	chr1	-	1555	14	FSM	ENSG00000158062.21	ENST00000357089.8	1555	14	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	27.4551813370176	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-26305448	True	NA	NA	False	AATAAA	-15	NA	26306632	26282283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_31479.known	chr12	-	9314	11	FSM	ENSG00000060982.15	ENST00000261192.12	9314	11	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_7	66.7769421282526	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTGACTGTTTGTATCC	-24933113	True	NA	-7	True	AATAAA	-16	NA	24949101	24810023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_31481.known	chr12	-	4694	11	FSM	ENSG00000060982.15	ENST00000538118.5	4694	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	245.094287979137	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAGAGGCAGAGGCAGG	-24902260	False	NA	25	True	AAGAAA	-30	NA	24902296	24814802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24901962
transcript_31482.known	chr12	-	1811	11	FSM	ENSG00000060982.15	ENST00000539282.5	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_10	219.4749188404	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAATATCTGTTTTCTTC	-24901883	True	NA	NA	False	NA	NA	NA	24903075	24817480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24902946
transcript_3149.known	chr1	-	2646	14	FSM	ENSG00000158062.21	ENST00000472155.5	2646	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_11	30.7649997090946	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCTCCGCCAGGCTCT	-26305456	True	NA	NA	False	AATAAA	-18	NA	26306640	26282280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_31492.known	chr12	-	1360	10	FSM	ENSG00000060982.15	ENST00000539780.5	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	250.785777453267	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTAGTAACTTACCTTAC	-24933055	True	NA	5	True	AATGAA	-32	NA	24949043	24817808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24818050_24829822_24829898_24832722_24832864_24836510_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24894274_24894476_24901813_24901886_24948926
transcript_31504.nic	chr12	-	1407	8	ISM	ENSG00000060982.15	ENST00000261192.12	9314	11	-271	26423	-271	0	5prime_fragment	FALSE	canonical	3	720	junction_4	44.7842902484925	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAGTGTTGAAATAATAT	-24949362	False	NA	NA	False	AATAAA	-21	NA	24949372	24836446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300_24881412_24894274_24894476_24901813_24901886_24948926
transcript_31519.nnic	chr12	-	670	2	NNC	ENSG00000060982.15	novel	9314	11	NA	NA	-151	27758	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGATATGTCATGGTATA	-24949242	False	NA	NA	False	AATAAA	-21	NA	24949252	24917672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_24918017_24948926
transcript_31520.known	chr12	-	521	2	FSM	ENSG00000060982.15	ENST00000355164.3	521	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGTAAATGTTCCTACTGT	-24933073	True	NA	NA	False	NA	NA	NA	24949061	24945430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24945817_24948926
transcript_31522.known	chr12	-	675	5	FSM	ENSG00000060982.15	ENST00000612790.1	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	720	junction_4	50.3115294937453	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTAGTGTTGAAATAATAT	-24881333	True	NA	NA	False	AATAAA	-21	NA	24881398	24836446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_24836597_24842081_24842225_24849785_24849950_24878529_24878650_24881300
transcript_31524.known	chr12	-	2361	15	FSM	ENSG00000118307.20	ENST00000320267.13	2361	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.557874976850475	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTACTCAAGTTTTATT	-25195145	True	NA	NA	False	ATTAAA	-17	NA	25195160	25108419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25108824_25110126_25110241_25111771_25111940_25114655_25114871_25119144_25119302_25121752_25121914_25123210_25123287_25144364_25144678_25147000_25147105_25149627_25149775_25154318_25154457_25155310_25155413_25158471_25158564_25161112_25161198_25195075
transcript_31525.known	chr12	-	5430	6	FSM	ENSG00000133703.14	ENST00000256078.10	5430	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	249.625799948643	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-25239383	True	NA	-5	True	AATAAA	-16	NA	25250929	25205245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25209912_25215436_25215561_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_31528.known	chr12	-	5306	5	FSM	ENSG00000133703.14	ENST00000311936.8	5306	5	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	61.8885086264001	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTGTGTATTTATTCA	-25239383	True	NA	-5	True	AATAAA	-16	NA	25250929	25205245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25209912_25225613_25225774_25227233_25227413_25245273_25245396_25250750
transcript_31535.known	chr12	+	838	4	FSM	ENSG00000205707.11	ENST00000556351.6	838	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	42.6640624205223	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAGCAAAATAATTTCTT	25194111	True	NA	NA	False	NA	NA	NA	25195271	25204666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25203724_25203833_25203919_25204008_25204090
transcript_31536.known	chr12	+	1242	3	FSM	ENSG00000205707.11	ENST00000381356.9	1242	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	6.5	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATTCACTGGTATAC	25194076	True	NA	NA	False	AATAAA	-22	NA	25195236	25205143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25203919_25204008_25204090
transcript_31538.known	chr12	+	538	2	FSM	ENSG00000205707.11	ENST00000555151.5	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGTAATAGTTATTAGC	25194116	True	NA	NA	False	NA	NA	NA	25195276	25196184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_25195338_25195707
transcript_31539.known	chr12	-	1696	3	FSM	ENSG00000133703.14	ENST00000686969.1	2957	3	0	1261	0	-1228	multi-exon	FALSE	canonical	1	12	junction_1	37.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATTCATTCACTTATTTA	-25239383	True	NA	NA	False	AATAAA	-43	NA	25250929	25233818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25235227_25245273_25245396_25250763
transcript_31540.known	chr12	-	3560	4	FSM	ENSG00000246695.9	ENST00000670839.1	3560	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	13.2748718344933	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTGCACCTTTGCACTCT	-25958097	True	NA	NA	False	NA	NA	NA	25958541	25952448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958018
transcript_31541.known	chr12	-	815	4	FSM	ENSG00000246695.9	ENST00000542086.5	815	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	23.0988215187606	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGAATAAATTATGGACTT	-25959029	False	NA	NA	False	AATGAA	-31	NA	25959065	25954804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956762_25958931
transcript_31542.known	chr12	-	1121	4	FSM	ENSG00000246695.9	ENST00000535436.6	1272	4	0	151	0	-3	multi-exon	FALSE	canonical	0	0	junction_3	23.0988215187606	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCAGGAATAAATTATGGA	NA	False	NA	NA	False	AATGAA	-28	NA	25959765	25954807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_25955242_25956226_25956348_25956638_25956765_25959325
transcript_31548.known	chr12	+	4348	3	FSM	ENSG00000123096.12	ENST00000422622.3	4348	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTTGGACGTGCTTTAAA	26195281	True	NA	11	True	AATAAA	-23	NA	26195339	26234779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26195532_26224292_26224380_26230710
transcript_31550.known	chr12	-	438	3	FSM	ENSG00000123095.6	ENST00000541271.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATATAAGTTCCTGACT	-26124874	False	NA	NA	False	AATAAA	-2	NA	26124899	26123987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26124180_26124518_26124583_26124717
transcript_31552.known	chr12	-	12564	57	FSM	ENSG00000123104.12	ENST00000381340.8	12564	57	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_49	17.9305277817083	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTGTTTGCAATACTT	-26830448	True	NA	-21	True	AATAAA	-16	NA	26833194	26335351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26339484_26340166_26340329_26387433_26387595_26398875_26399042_26400127_26400259_26411319_26411413_26415302_26415499_26419048_26419214_26427912_26428089_26436220_26436347_26439126_26439320_26443542_26443651_26475295_26475419_26476911_26477008_26481130_26481242_26483697_26483899_26486103_26486361_26487067_26487252_26494152_26494341_26495151_26495261_26550246_26550356_26556232_26556376_26561761_26561953_26578712_26578834_26580026_26580156_26595464_26595591_26596882_26597135_26599144_26599346_26599986_26600110_26602369_26602496_26602616_26602707_26621122_26621297_26622239_26622406_26624298_26624357_26628032_26628163_26631865_26632060_26653975_26654127_26655707_26655853_26656296_26656549_26657706_26657893_26658010_26658131_26659112_26659286_26663684_26663847_26665909_26666052_26681873_26682035_26682573_26682674_26686480_26686633_26695605_26695651_26711172_26711269_26715298_26715446_26715751_26715836_26716143_26716243_26722396_26722556_26724655_26724743_26725649_26725766_26790156_26790228_26832689
transcript_31558.known	chr12	-	2634	17	FSM	ENSG00000064102.15	ENST00000261191.12	2634	17	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_6	39.9483553322286	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26933633	True	NA	-17	True	AATAAA	-27	NA	26937981	26905180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26914407_26914579_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_31569.nic	chr12	-	2789	16	NIC	ENSG00000064102.15	novel	2634	17	NA	NA	-3	0	intron_retention	FALSE	canonical	3	46	junction_5	108.047397007054	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGGAGAATTACTTTAGA	-26937846	True	NA	-17	True	AATAAA	-27	NA	26938307	26905180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_26905537_26906301_26906438_26911177_26911318_26913456_26913688_26913973_26914129_26916001_26916181_26917351_26917442_26917643_26917734_26922615_26922701_26924354_26924484_26925760_26925852_26928204_26928286_26928702_26928906_26934555_26934631_26936578_26936815_26937795
transcript_3157.known	chr1	-	2542	13	FSM	ENSG00000158062.21	ENST00000475591.5	2542	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_10	28.4608649435208	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305452	True	NA	NA	False	AATAAA	-17	NA	26306636	26282281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26302812_26302919_26306591
transcript_31574.known	chr12	+	2932	7	FSM	ENSG00000111790.14	ENST00000229395.8	2932	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	56.2240063397201	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTCTCCAATTTAATTT	26933186	True	NA	13	True	ATTAAA	-20	NA	26938469	26966648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514_26960629_26963341_26963456_26964595
transcript_31577.known	chr12	+	2790	6	FSM	ENSG00000111790.14	ENST00000327214.5	2790	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_4	50.6620173305406	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTCTCCAATTTAATTTGA	26933216	True	NA	15	True	ATTAAA	-22	NA	26938499	26966650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26963341_26963456_26964595
transcript_31580.known	chr12	+	956	5	FSM	ENSG00000111790.14	ENST00000546072.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	45.8659732263472	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGGTTTTATAGGTTATT	26933213	True	NA	109	True	NA	NA	NA	26938496	26960846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600_26957744_26960514
transcript_31581.known	chr12	+	865	4	FSM	ENSG00000111790.14	ENST00000395941.4	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	12.3558353285671	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTTGTACGTTGAAAAAT	26933200	True	NA	NA	False	TATAAA	-24	NA	26938483	26957971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_26938711_26954144_26954294_26956542_26956661_26957600
transcript_31587.nic	chr12	-	2115	12	NIC	ENSG00000064115.11	novel	4315	12	NA	NA	-50	448	combination_of_known_junctions	FALSE	canonical	2	9	junction_11	182.453616883989	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGCAGAGCACTGGT	-27014426	False	NA	-14	True	ATTAAA	-29	NA	27014484	26973647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_26974228_26975495_26975659_26976259_26976358_26979783_26979937_26980565_26980647_26982772_26982860_26990449_26990628_26995236_26995409_26996741_26996863_26999525_26999677_27003235_27003391_27014308
transcript_31597.nnic	chr12	+	876	6	NNC	ENSG00000152944.9	novel	575	6	NA	NA	-14	-2	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_5	277.329695488961	99	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTACAGTTTGCTTTTTT	27017973	True	NA	18	True	ATTAAA	-20	NA	27022531	27030671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284_27028430_27030157_27030231_27030319
transcript_31599.known	chr12	+	2669	4	FSM	ENSG00000152944.9	ENST00000282892.4	2669	4	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_3	31.8573208052543	1032	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	27017999	True	NA	20	True	ATTAAA	-22	NA	27022557	27030673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27022622_27026419_27026535_27027346_27027448_27028284
transcript_31603.known	chr12	+	578	4	FSM	ENSG00000152944.9	ENST00000536711.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	278.540641359369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGGATGTTGTTTATCGA	27018003	True	NA	NA	False	AAGAAA	-22	NA	27022561	27028336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27022872_27026419_27026535_27027346_27027448_27028284
transcript_31604.known	chr12	+	1374	3	FSM	ENSG00000152944.9	ENST00000536503.5	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	254	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAATATGCTGAGCTACAT	27017991	True	NA	NA	False	GGGGCT	-9	NA	27022549	27029485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27022622_27027346_27027448_27028284
transcript_31607.known	chr12	+	414	1	FSM	ENSG00000152944.9	ENST00000621885.1	414	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACAGTTTGCTTTTTTCA	27030241	False	NA	20	True	ATTAAA	-22	NA	27030259	27030673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27030300_27030700
transcript_31609.known	chr12	+	4957	14	FSM	ENSG00000211455.8	ENST00000389032.8	4957	14	0	0	0	0	multi-exon	FALSE	canonical	1	124	junction_7	88.1182637276	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTTGATGAAGTTTTT	27237937	True	NA	15	True	AATAAA	-17	NA	27244285	27325959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503_27314659_27315014_27315118_27315288_27315351_27317335_27317454_27317895_27318020_27319327_27319424_27322142_27322235_27322327
transcript_31618.nic	chr12	+	800	7	ISM	ENSG00000211455.8	ENST00000389032.8	4957	14	-45	11276	8	-423	5prime_fragment	FALSE	canonical	3	423	junction_6	24.0901086202062	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTGATTATTTTTT	27237892	True	NA	NA	False	AATAAA	-13	NA	27244240	27314683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_27244333_27297709_27297855_27302136_27302189_27308338_27308462_27309113_27309198_27312548_27312673_27314503
transcript_3162.known	chr1	-	1312	12	FSM	ENSG00000158062.21	ENST00000374223.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	41.2244411175524	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGCTGCTCCGCCAGGCTC	-26305436	True	NA	NA	False	AATAAA	-17	NA	26306620	26282281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26296918_26296996_26297426_26297482_26297961_26298063_26301693_26301723_26306591
transcript_31621.known	chr12	+	581	3	FSM	ENSG00000211455.8	ENST00000539863.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_1	24	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTCTAGTTCAGTGC	27237918	True	NA	NA	False	TTTAAA	-6	NA	27244266	27302506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27244333_27297709_27297855_27302136
transcript_31624.known	chr12	+	3208	28	FSM	ENSG00000110841.14	ENST00000542629.5	3208	28	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_11	20.7810454946774	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTAGCACCTGGATGAACA	27521909	True	NA	NA	False	NA	NA	NA	27524223	27692882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27660883_27660946_27664361_27664438_27667165_27667321_27671430_27671547_27672426_27672484_27673766_27673828_27674191_27674222_27676427_27676600_27679488_27679640_27679932_27680062_27681545_27681697_27682386_27682499_27682614_27682704_27687384_27687508_27688297_27688424_27689014_27689204_27691748_27691929_27692590_27692657_27692795
transcript_31626.known	chr12	+	1191	10	FSM	ENSG00000110841.14	ENST00000545381.5	1191	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	30.0854749417245	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTTTGGTGCATTTCC	27521827	True	NA	NA	False	AAAAAG	-17	NA	27524141	27658848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728_27647843_27650009_27650142_27654721_27654815_27656615_27656731_27658815
transcript_31630.known	chr12	+	875	6	FSM	ENSG00000110841.14	ENST00000535047.5	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	8.82269800004511	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAGTAGTAGAGTCTCA	27521905	True	NA	NA	False	ATTAAA	-10	NA	27524219	27647977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909_27635116_27646061_27646149_27647728
transcript_31633.known	chr12	+	2805	4	FSM	ENSG00000110841.14	ENST00000545334.5	2805	4	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	0.816496580927726	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGGAAGTTGTTTTAAAT	27521843	True	NA	NA	False	GATAAA	-20	NA	27524157	27637319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27524366_27578151_27578240_27633361_27633461_27634909
transcript_31641.known	chr12	+	466	2	FSM	ENSG00000061794.13	ENST00000542791.1	466	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATCATTTTTTTTCCTCA	27702335	True	NA	11	True	TATAAA	-15	NA	27710846	27755537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27755180
transcript_31645.known	chr12	+	1829	8	FSM	ENSG00000061794.13	ENST00000081029.8	1829	8	0	0	0	0	multi-exon	FALSE	canonical	3	569	junction_4	34.5903136140505	1659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTAATAGACTTATTT	27702320	True	NA	NA	False	AATAAA	-17	NA	27710831	27756295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27735446_27735557_27737538_27737609_27755180
transcript_31646.known	chr12	+	1715	7	FSM	ENSG00000061794.13	ENST00000538315.5	1715	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	227.640554871539	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTGCCTAATAGACTTATT	27702323	True	NA	NA	False	AATAAA	-16	NA	27710834	27756294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27710956_27714779_27714821_27716290_27716459_27719807_27719869_27724046_27724187_27737538_27737609_27755180
transcript_31647.known	chr12	+	1894	4	FSM	ENSG00000087448.11	ENST00000539176.1	1894	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	39.8859485143439	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACATGACTGAATTGAA	27779326	False	NA	-2	True	AATAAA	-3	NA	27780047	27798156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27781203_27791707_27791902_27797246_27797350_27797714
transcript_31649.known	chr12	+	6490	3	FSM	ENSG00000087448.11	ENST00000381271.7	6490	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	18	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTGTTATCTAAGTTCT	27780217	False	NA	18	True	AATAAA	-15	NA	27780232	27803040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27781203_27791707_27791902_27797714
transcript_31650.known	chr12	+	792	2	FSM	ENSG00000257042.1	ENST00000538113.1	792	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCAATGATAAGTAGTGTG	NA	False	NA	NA	False	AATAAA	-16	NA	27958516	27969813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_27958607_27969111
transcript_31651.known	chr12	+	2738	16	FSM	ENSG00000123106.11	ENST00000545336.5	2738	16	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	54.0441794584147	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187484	True	NA	17	True	AATAAA	-18	NA	28190445	28550166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28225794_28225862_28226139_28226200_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31653.nnic	chr12	+	2698	15	NIC	ENSG00000123106.11	novel	2738	16	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	48.8446621485722	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187464	True	NA	17	True	AATAAA	-18	NA	28190425	28550166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_28190642_28225794_28225862_28255580_28255663_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31661.nic	chr12	+	2558	13	FSM	ENSG00000123106.11	ENST00000536442.6	2519	13	-39	0	-10	0	multi-exon	FALSE	canonical	3	44	junction_1	34.3713381888004	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187455	True	NA	17	True	AATAAA	-18	NA	28190416	28550166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31667.known	chr12	+	1301	11	ISM	ENSG00000123106.11	ENST00000536442.6	2519	13	-18	97530	-6	-4	5prime_fragment	FALSE	canonical	3	44	junction_1	33.9565899347976	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAAAAATAAGTCAGGT	28187476	True	NA	NA	False	AAAAAG	-33	NA	28190437	28452636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477
transcript_3167.known	chr1	-	2254	11	FSM	ENSG00000158062.21	ENST00000314675.11	2254	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	40.1228114667953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGGTAAGGAATGTTGCC	-26305452	True	NA	NA	False	GGGGCT	-26	NA	26306636	26281327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26300925_26301025_26301693_26301723_26302812_26302919_26306591
transcript_31690.known	chr12	+	2440	12	FSM	ENSG00000123106.11	ENST00000539107.5	2440	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	49.5668844396927	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGTTACTTTTTGTT	28187465	True	NA	17	True	AATAAA	-18	NA	28190426	28550166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28190642_28257201_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31691.known	chr12	+	2334	12	FSM	ENSG00000123106.11	ENST00000381259.5	2334	12	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	22.5634092729031	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGTTGTTACTTTTTGT	NA	False	NA	16	True	AATAAA	-17	NA	28257199	28550165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_28257246_28259363_28259443_28305648_28305807_28306741_28306946_28307644_28307750_28362437_28362516_28391303_28391412_28450160_28450254_28450349_28450419_28452477_28452655_28484051_28484166_28549062
transcript_31692.known	chr12	-	2409	1	FSM	ENSG00000247934.4	ENST00000617468.1	2409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTTTTGTGACTGGCTT	-28190706	True	NA	6	True	TATAAA	-18	NA	28190738	28188329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_28188300_28190700
transcript_31696.nic	chr12	+	2169	13	FSM	ENSG00000064763.12	ENST00000686419.1	2115	13	-45	-9	6	9	multi-exon	FALSE	canonical	2	10	junction_12	40.9389789809174	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTCCTTCAATCGGG	29149058	False	NA	NA	False	ATTAAA	-27	NA	29149087	29341130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631_29333735_29340807
transcript_31698.known	chr12	+	3538	12	FSM	ENSG00000064763.12	ENST00000536681.8	3538	12	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_6	19.4000937204859	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCCTCTTCTAGTGTTGT	29148551	True	NA	NA	False	AATAAA	-18	NA	29149277	29335616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29270411_29270639_29293299_29293476_29297020_29297201_29307657_29307836_29309185_29309231_29311027_29311147_29311882_29311951_29316840_29317013_29321794_29321925_29332599_29332728_29333631
transcript_31707.known	chr12	+	871	2	FSM	ENSG00000064763.12	ENST00000549080.1	871	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGGGAAGTGAGGAGCGC	29148953	False	NA	NA	False	NA	NA	NA	29149209	29172050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29171377
transcript_31708.known	chr12	+	567	2	FSM	ENSG00000064763.12	ENST00000550541.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTACTTGCTTTGAATAG	29148593	False	NA	NA	False	AGTAAA	-23	NA	29149319	29151874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_29149408_29151395
transcript_31709.known	chr12	-	503	1	FSM	ENSG00000274315.1	ENST00000616916.1	503	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTTCAATAGAGTTTTA	-29331925	False	NA	NA	False	AATAAA	-21	NA	29331936	29331433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_29331400_29331900
transcript_31716.nnic	chr12	+	1100	3	NNC	ENSG00000257262.1	novel	571	3	NA	NA	-9	1076	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGAAAATGTTTTTGTAC	NA	False	NA	NA	False	AATAAA	-25	NA	30200973	30218992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_30201109_30217602_30218382_30218806
transcript_31718.known	chr12	-	5208	25	FSM	ENSG00000133704.10	ENST00000256079.9	5208	25	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_13	21.8237494868931	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAACTTTTGTGTGTGA	-30690046	True	NA	-5	True	AATAAA	-21	NA	30695869	30628987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_30630958_30631894_30632012_30634082_30634287_30636981_30637188_30639514_30639736_30649136_30649233_30652191_30652290_30652966_30653093_30656683_30656751_30661140_30661267_30662326_30662488_30663488_30663655_30665219_30665310_30665728_30665846_30666174_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_31719.nic	chr12	-	1468	11	ISM	ENSG00000133704.10	ENST00000256079.9	5208	25	-28	37190	-28	3090	5prime_fragment	FALSE	canonical	3	168	junction_3	21.0864885649555	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTATTTCATTTTTCTTT	-30690074	True	NA	NA	False	AAGAAA	-7	NA	30695897	30666177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_30666252_30669182_30669283_30670961_30671097_30673989_30674075_30674658_30674754_30676497_30676588_30680481_30680639_30681658_30681818_30684300_30684458_30690495_30690578_30695563
transcript_31725.known	chr12	+	16489	5	FSM	ENSG00000285517.1	ENST00000648050.1	16489	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.40254569624358	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGCATGCCTAATCTT	30795795	False	NA	NA	False	AATAAA	-25	NA	30795810	30817435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30796217_30798144_30798316_30799912_30800022_30800533_30800602_30801700
transcript_31726.known	chr12	+	2391	4	FSM	ENSG00000285517.1	ENST00000650193.1	2391	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.4142135623731	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATAATTCCCACTTTACC	30795439	False	NA	NA	False	TTTAAA	-27	NA	30795457	30803155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30796217_30799912_30800022_30800533_30800602_30801700
transcript_31732.known	chr12	+	1250	4	FSM	ENSG00000285517.1	ENST00000547804.2	1250	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.0184900284226	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCTTTTCGTGAGTTGAAA	30795756	True	NA	NA	False	AATATA	-13	NA	30795964	30802708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_30796030_30799912_30800022_30800533_30800602_30801700
transcript_31737.nnic	chr12	-	1697	3	FSM	ENSG00000245614.5	ENST00000685910.1	1384	3	-313	0	-259	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTGTTTATAGTTTGT	-31073893	False	NA	1	True	AATAAA	-24	NA	31074106	31020761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31021436_31060659_31060771_31073194
transcript_31738.known	chr12	-	2031	3	FSM	ENSG00000245614.5	ENST00000500527.1	2031	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGATTGTTTATAGTTTG	-31073634	False	NA	0	True	AATAAA	-23	NA	31073847	31020762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31022030_31060659_31060771_31073194
transcript_31740.nnic	chr12	-	1165	3	NNC	ENSG00000245614.5	novel	810	2	NA	NA	-259	4375	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTGAAGCTTTATT	-31073893	False	NA	NA	False	ATTAAA	-19	NA	31074106	31056203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31056346_31060659_31060771_31073194
transcript_31742.known	chr12	-	494	2	FSM	ENSG00000245614.5	ENST00000618041.2	810	2	305	11	279	-11	multi-exon	FALSE	canonical	3	18	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATGGCCACCTATCTTC	-31073294	False	NA	NA	False	ATTAAA	-13	NA	31073507	31060589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31060771_31073194
transcript_31744.known	chr12	+	3920	27	FSM	ENSG00000013573.17	ENST00000542838.6	3920	27	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_8	95.1996656053	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTATTGATATGTGCT	31067649	True	NA	23	True	AATAAA	-24	NA	31073859	31104799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582_31084670_31084968_31085127_31087937_31087984_31089043_31089152_31089402_31089491_31089885_31090095_31091718_31091872_31092845_31092893_31093244_31093325_31094589_31094635_31094754_31094823_31096340_31096380_31096636_31096746_31096858_31096991_31097884_31097998_31100634_31100708_31101026_31101131_31101832_31101983_31102242_31102312_31102426_31102528_31102935_31103021_31103316_31103396_31103576_31103732_31103806
transcript_31757.nic	chr12	+	728	4	ISM	ENSG00000013573.17	ENST00000535158.5	1718	7	-67	5227	-25	0	5prime_fragment	FALSE	canonical	3	177	junction_1	95.1571799124422	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAAGCGCCTGGTGAGCC	31067624	True	NA	NA	False	NA	NA	NA	31073834	31084656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_31074092_31078389_31078538_31083812_31084062_31084582
transcript_31772.nic	chr12	-	986	7	FSM	ENSG00000177359.21	ENST00000688821.1	750	7	-242	6	-242	0	multi-exon	FALSE	canonical	2	20	junction_6	23.7726500182224	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31119358	31111656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_31775.nnic	chr12	-	859	7	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-2291	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	29.0100557278564	135	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121407	31111656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31121138
transcript_31781.known	chr12	-	1215	7	FSM	ENSG00000177359.21	ENST00000391394.4	1215	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	33.3716446503115	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGAGTCTATGACTTTT	NA	False	NA	-6	True	ATTAAA	-14	NA	31119110	31111658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31112289_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31117419_31117481_31118962
transcript_31786.nnic	chr12	-	777	6	NNC	ENSG00000177359.21	novel	781	7	NA	NA	-2270	0	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_5	26.6563313304738	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	NA	False	NA	-4	True	ATTAAA	-16	NA	31121386	31111656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356_31116470_31121138
transcript_31798.known	chr12	-	520	5	ISM	ENSG00000177359.21	ENST00000688317.1	781	7	2627	0	1011	0	3prime_fragment	FALSE	canonical	3	52	junction_1	10.6389614154766	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTCTATGACTTTTTT	-31116392	False	NA	-4	True	ATTAAA	-16	NA	31116460	31111656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_31111810_31112980_31113084_31114395_31114465_31114836_31114928_31116356
transcript_31814.nnic	chr12	-	1048	7	NNC	ENSG00000139146.14	novel	2941	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	3	439	junction_5	1124.21311987047	174	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATATCTGA	NA	False	NA	7	True	NA	NA	NA	31326219	31282687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31304981_31305124_31326023
transcript_31817.known	chr12	-	1555	6	FSM	ENSG00000139146.14	ENST00000454658.6	1555	6	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_5	1120.88625649528	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCCCTCATGATAATAAA	-31305407	False	NA	-49	True	NA	NA	NA	31324162	31282061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31323943
transcript_31818.known	chr12	-	2941	6	FSM	ENSG00000139146.14	ENST00000337682.9	2941	6	0	0	0	0	multi-exon	FALSE	canonical	3	2602	junction_5	179.216740289516	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	-31307395	True	NA	-26	True	AATAAA	-24	NA	31326150	31280583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31298076_31298225_31326023
transcript_31823.known	chr12	-	738	5	FSM	ENSG00000139146.14	ENST00000542983.1	738	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	1209.8083267609	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAAAAAAAATATCTGA	NA	False	NA	7	True	NA	NA	NA	31326199	31282687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31293804_31293932_31295233_31295334_31326023
transcript_31826.known	chr12	-	2532	3	FSM	ENSG00000139146.14	ENST00000539409.5	2532	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1442.5	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTGTTTTGTGGCTTTG	-31307361	True	NA	-26	True	AATAAA	-24	NA	31326116	31280583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31282872_31287633_31287785_31326023
transcript_31830.nnic	chr12	+	530	3	Intergenic	novelGene_9	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCTTTGAATCCAATCAT	NA	False	NA	NA	False	AATAAA	-24	NA	31362154	31370247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr12_+_31362256_31369619_31369884_31370082
transcript_31833.nnic	chr12	-	453	2	Fusion	ENSG00000256232.1_ENSG00000170456.16	novel	868	2	NA	NA	-17197	0	multi-exon	FALSE	canonical	2	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	-31386314	True	NA	-5	True	AATAAA	-17	NA	31386498	31363480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_31363796_31386360
transcript_31834.known	chr12	-	868	2	FSM	ENSG00000256232.1	ENST00000541749.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTATACCTTAAGCTAAT	-31369276	False	NA	-5	True	AATAAA	-17	NA	31369301	31363480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31363796_31368748
transcript_31835.nnic	chr12	-	355	2	NNC	ENSG00000170456.16	novel	9506	21	NA	NA	40268	4483	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGATATGGATGTGGC	-31386299	True	NA	NA	False	ATTAAA	-20	NA	31386483	31377742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_31377975_31386360
transcript_31840.known	chr12	-	1025	9	FSM	ENSG00000151743.11	ENST00000536761.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	48.5540935452409	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGCTTATCAAAACTAC	-31728110	True	NA	NA	False	NA	NA	NA	31729021	31672277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_31851.known	chr12	-	1952	7	FSM	ENSG00000151743.11	ENST00000281471.11	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	12.5797456254091	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAATCACATTTTCCCCTT	-31728110	True	NA	-3	True	AATAAA	-25	NA	31729021	31671141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31709292_31709426_31728970
transcript_31858.known	chr12	-	880	6	FSM	ENSG00000151743.11	ENST00000541931.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	29.9399398796992	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGAATTAGCTAAGTCTTG	-31728199	True	NA	-76	True	NA	NA	NA	31729110	31672169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31672378_31689006_31689119_31697360_31697418_31697739_31697958_31701862_31702008_31728970
transcript_31867.known	chr12	-	560	5	FSM	ENSG00000151743.11	ENST00000509386.2	560	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.20156211871642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTCCTGAGTAGTTGGG	-31728189	True	NA	NA	False	NA	NA	NA	31729100	31709079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31709168_31709292_31709426_31714881_31714952_31719217_31719357_31728970
transcript_31868.known	chr12	+	2055	4	FSM	ENSG00000139160.13	ENST00000395763.7	2055	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.94392028877595	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGTTCTGATGCTTGTT	31658993	True	NA	NA	False	TTTAAA	-40	NA	31659186	31668967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31659363_31661840_31662268_31666086_31666218_31667646
transcript_31874.known	chr12	-	430	3	FSM	ENSG00000151743.11	ENST00000422146.6	430	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	36.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCATCCGCCTCAGCCTC	-31728146	True	NA	NA	False	NA	NA	NA	31729057	31708957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_31709168_31709292_31709426_31728970
transcript_31878.known	chr12	+	2088	1	FSM	ENSG00000276900.1	ENST00000619086.1	2088	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGAATTTTATGTAATTT	NA	False	NA	13	True	AATAAA	-21	NA	31729116	31731204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31729100_31731200
transcript_31880.known	chr12	+	6234	6	FSM	ENSG00000174718.12	ENST00000312561.9	6234	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	64.4409807498303	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	31950902	True	NA	6	True	AATAAA	-23	NA	31959414	31993107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877_31985958_31987238_31987323_31992377
transcript_31882.known	chr12	+	965	5	FSM	ENSG00000174718.12	ENST00000535596.5	965	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	92.9122569955116	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTGATGTGAATGTCAA	31950925	True	NA	-39	True	NA	NA	NA	31959437	31992941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31970188_31970357_31987238_31987323_31992377
transcript_31883.nic	chr12	+	782	4	ISM	ENSG00000174718.12	ENST00000312561.9	6234	6	-259	12047	-214	0	5prime_fragment	FALSE	canonical	3	98	junction_1	15.5848929700813	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGTTCTTTCAGCTA	31959059	True	NA	5	True	AATAAA	-17	NA	31959155	31981060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_31959492_31960776_31960872_31970188_31970357_31980877
transcript_31884.nnic	chr12	+	1094	4	NIC	ENSG00000174718.12	novel	6234	6	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	53.8970211504206	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAAACCTTCACAGCTCA	31950878	True	NA	6	True	AATAAA	-23	NA	31959390	31993107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_31959492_31960776_31960872_31970188_31970357_31992377
transcript_31886.known	chr12	+	814	4	FSM	ENSG00000174718.12	ENST00000397578.7	814	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	108.962786715873	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTGTTTTATAACTAA	31950936	True	NA	-11	True	AATATA	-3	NA	31959448	31992969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31987238_31987323_31992377
transcript_31890.known	chr12	+	362	3	FSM	ENSG00000174718.12	ENST00000540924.5	362	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	37	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAGAGTTCTTTCAGCTA	31950895	True	NA	5	True	AATAAA	-17	NA	31959407	31981060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31980877
transcript_31892.known	chr12	+	674	3	FSM	ENSG00000174718.12	ENST00000541981.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	47	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGGGAGGACCGTTCCT	31950857	True	NA	NA	False	TTTAAA	-39	NA	31959369	31992834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_31959492_31960776_31960872_31992377
transcript_31895.nic	chr12	+	1572	2	ISM	ENSG00000174718.12	ENST00000540924.5	362	3	-31	18827	7	-8013	5prime_fragment	FALSE	canonical	3	98	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCATTTGTGAAGGTG	31950864	True	NA	NA	False	TTTAAA	-11	NA	31959376	31962233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_31959492_31960776
transcript_31897.known	chr12	+	423	3	FSM	ENSG00000151746.15	ENST00000551086.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	15	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTGTGTCAGGCTG	32107284	False	NA	27	True	AATAAA	-38	NA	32107295	32108806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32107545_32107661_32107674_32108644
transcript_31898.known	chr12	+	1328	2	FSM	ENSG00000151746.15	ENST00000550207.1	1328	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATAATGTCTCTTTAGTTT	32102363	True	NA	NA	False	TATAAA	-25	NA	32106884	32108329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32107545_32107661
transcript_31899.known	chr12	+	766	2	FSM	ENSG00000151746.15	ENST00000547680.2	766	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTAGCTCTTCTGTTATC	NA	False	NA	21	True	AATAAA	-22	NA	32328401	32333065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32328556_32332453
transcript_31900.known	chr12	+	1962	1	FSM	ENSG00000151746.15	ENST00000551848.1	1962	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGGAATCTAATTTTTGTG	32102313	True	NA	17	True	AATAAA	-28	NA	32106834	32108796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32106800_32108800
transcript_31905.known	chr12	+	4514	20	FSM	ENSG00000087470.19	ENST00000549701.6	4514	20	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_15	68.5729488025652	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACGAAAAATTTTACGACTT	32671579	True	NA	NA	False	NA	NA	NA	32679300	32745650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31907.known	chr12	+	2393	19	FSM	ENSG00000087470.19	ENST00000547312.5	2393	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_15	97.485120738665	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAATCCAAATAATAAATGG	32671598	True	NA	-46	True	TATAAA	-40	NA	32679319	32743581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32737864_32737943_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31908.known	chr12	+	4439	19	FSM	ENSG00000087470.19	ENST00000452533.6	4439	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_14	61.2944975678793	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTGTCAAAAAATGAATTC	32671478	True	NA	NA	False	AATAAA	-26	NA	32679199	32745552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32738263_32738297_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31910.known	chr12	+	3101	18	FSM	ENSG00000087470.19	ENST00000266481.10	3101	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	94.3955822671649	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTCATAGCTTCATACCA	32671581	True	NA	NA	False	NA	NA	NA	32679302	32744350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_32679466_32701414_32701563_32707366_32707414_32708152_32708225_32710928_32711016_32713208_32713372_32718642_32718764_32720663_32720796_32722426_32722634_32731013_32731135_32731355_32731512_32731853_32731944_32733714_32733808_32737104_32737162_32740063_32740241_32740408_32740519_32742588_32742749_32743353
transcript_31920.known	chr12	-	413	1	FSM	ENSG00000276148.1	ENST00000612009.1	413	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTAGTTCTTACAAGATG	NA	False	NA	NA	False	AATAAA	-14	NA	32725660	32725247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32725200_32725700
transcript_31921.known	chr12	-	2117	5	FSM	ENSG00000139131.13	ENST00000324868.13	2117	5	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	23.2486558751253	948	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-32754276	True	NA	NA	False	NA	NA	NA	32755897	32746543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32747364_32749936_32750108_32750718_32750875_32753917_32754086_32755095
transcript_31922.known	chr12	-	4229	13	FSM	ENSG00000057294.16	ENST00000340811.9	4229	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_5	10.8282039138539	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACCAAAGTAGTGTTGC	-32895234	True	NA	-24	True	AATAAA	-26	NA	32896777	32790754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32792493_32792643_32792732_32796108_32796299_32802402_32802557_32821355_32821530_32822466_32822632_32824044_32824163_32841027_32841206_32850765_32850974_32868926_32869063_32877845_32878544_32878919_32879033_32896508
transcript_31924.known	chr12	-	1563	2	FSM	ENSG00000057294.16	ENST00000546741.2	1563	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAATTCCAGGAAGAAA	-32896551	False	NA	NA	False	NA	NA	NA	32896601	32893308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_32894779_32896508
transcript_31927.nic	chr12	-	845	2	ISM	ENSG00000110975.8	ENST00000539102.1	2433	9	-237	49890	-64	-18365	5prime_fragment	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGAGCCTACGTCATCA	-33439872	True	NA	NA	False	ATTAAA	-23	NA	33439883	33426162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_33426496_33439371
transcript_31928.known	chr12	+	2913	3	FSM	ENSG00000139133.7	ENST00000266483.7	2913	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGACATATTTTGTGAT	34021417	True	NA	9	True	AATAAA	-24	NA	34022495	34028302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_34022771_34023961_34024160_34025862
transcript_3193.known	chr1	+	467	2	FSM	ENSG00000169442.9	ENST00000374213.3	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGTCCTGCTTGTGGTT	26317752	True	NA	7	True	AATAAA	-19	NA	26317957	26320523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26318072_26320170
transcript_31933.known	chr12	+	1637	3	FSM	ENSG00000139133.7	ENST00000541875.1	1637	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTAGTTTTTTTTA	34021394	True	NA	NA	False	AAAACA	-34	NA	34022472	34027029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_34022745_34023961_34024160_34025862
transcript_31934.known	chr12	+	10050	3	FSM	ENSG00000175548.9	ENST00000308742.9	10050	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAATGTGTTGTGTCT	38316566	True	NA	NA	False	AATAAA	-17	NA	38316773	38329721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_38317065_38318260_38318459_38320160
transcript_31935.known	chr12	-	3431	20	FSM	ENSG00000139117.14	ENST00000331366.10	3431	20	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_19	3.16227766016838	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTTCTTGTCAAACATC	-38904846	True	NA	-13	True	AATAAA	-15	NA	38905591	38652202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_38654071_38670728_38670803_38675716_38675775_38677451_38677555_38685489_38685618_38693656_38693839_38702874_38702922_38723771_38723834_38724845_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_31937.nic	chr12	-	1411	12	ISM	ENSG00000139117.14	ENST00000331366.10	3431	20	-520	72661	158	1495	5prime_fragment	FALSE	canonical	3	13	junction_11	2.90624861148105	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACTAATTCTGGAACAGT	-38905903	False	NA	NA	False	AAAAAG	-19	NA	38906111	38724863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_38724900_38730282_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_31939.nic	chr12	-	1014	11	ISM	ENSG00000139117.14	ENST00000331366.10	3431	20	-159	78080	-159	-3924	5prime_fragment	FALSE	canonical	3	13	junction_10	2.57681974534502	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGGCATTTTATTTTA	-38905542	False	NA	NA	False	NA	NA	NA	38905750	38730282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_38730359_38760846_38760889_38762111_38762217_38767634_38767739_38776237_38776302_38829378_38829456_38839915_38839956_38848558_38848663_38873003_38873051_38874470_38874512_38905436
transcript_3194.known	chr1	+	751	3	FSM	ENSG00000142669.15	ENST00000270792.10	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_1	71	6788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTCTGGTTGGTTGTGG	26270876	True	NA	29	True	ATTAAA	-22	NA	26280085	26281522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26280204_26280764_26280933_26281057
transcript_31942.nnic	chr12	+	565	3	Antisense	novelGene_ENSG00000139117.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTCCAGTGTGATT	38614392	True	NA	NA	False	AATAAA	-16	NA	38614415	38695540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_38614482_38684244_38684358_38695154
transcript_31945.known	chr12	+	526	2	FSM	ENSG00000257718.1	ENST00000551152.1	526	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGGCTTGCAGTAATTTGT	38906382	False	NA	7	True	AATAAA	-20	NA	38906450	38909592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_38906694_38909309
transcript_3195.known	chr1	+	768	2	FSM	ENSG00000142669.15	ENST00000319041.6	768	2	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAAGGCCCCGCAGTCC	26270912	True	NA	-43	True	NA	NA	NA	26280121	26281450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26280204_26280764
transcript_31950.known	chr12	-	7492	8	FSM	ENSG00000151233.11	ENST00000398675.8	7492	8	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_6	17.2780384374181	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGTCTGGATTATTTT	-42144552	True	NA	NA	False	AATAAA	-33	NA	42144874	42081844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42087948_42097441_42097615_42097909_42098034_42105817_42106070_42109565_42109692_42118999_42119172_42129758_42129852_42144425
transcript_31954.known	chr12	-	4096	4	FSM	ENSG00000015153.15	ENST00000534854.7	4096	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATTC	-42238085	True	NA	NA	False	AATAAA	-18	NA	42238248	42157103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42160827_42161612_42161766_42237598_42237725_42238154
transcript_31956.nic	chr12	-	415	3	ISM	ENSG00000015153.15	ENST00000534854.7	4096	4	-128	4595	-27	0	5prime_fragment	FALSE	canonical	3	14	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TCAAAGAAAGAGAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	42238376	42161698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_42161766_42237598_42237725_42238154
transcript_3196.known	chr1	-	1792	16	FSM	ENSG00000158062.21	ENST00000374221.7	1792	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_15	36.9082947617771	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCGCTGCTCCGCCAGGC	-26305461	True	NA	NA	False	AATAAA	-15	NA	26306645	26282283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26282570_26282648_26282790_26282863_26282938_26284141_26284246_26284361_26284483_26285463_26285542_26285822_26286038_26294204_26294332_26296918_26296996_26297426_26297482_26297961_26298063_26300925_26301025_26301693_26301723_26302812_26302919_26303042_26303168_26306591
transcript_31960.known	chr12	+	1693	11	FSM	ENSG00000134283.18	ENST00000395580.7	1693	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	146.49505111095	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTAGAGAATATTTGCTT	42320956	True	NA	15	True	AATAAA	-15	NA	42326144	42441950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31965.known	chr12	+	1863	10	FSM	ENSG00000134283.18	ENST00000613154.4	1863	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	126.929649028386	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTTTCGGACTGT	42320960	True	NA	NA	False	AATAAA	-34	NA	42326148	42442181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31968.known	chr12	+	1095	10	FSM	ENSG00000134283.18	ENST00000552761.5	1095	10	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	157.029446008003	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTAAAAATTTTTTTTC	42320982	True	NA	50	True	AAAACA	-1	NA	42326170	42441543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42332659_42332703_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31985.known	chr12	+	1583	9	FSM	ENSG00000134283.18	ENST00000449194.6	1583	9	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	51.7107338953916	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTTTGAGAGTAATTCT	42320979	True	NA	28	True	AATAAA	-28	NA	42326167	42441963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160_42355223_42374862_42375075_42387455_42387536_42393569_42393690_42398853_42398995_42441314
transcript_31986.known	chr12	+	847	4	FSM	ENSG00000134283.18	ENST00000549774.5	847	4	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_2	5.90668171555645	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGAGGTTGCAGTGAGC	42320969	True	NA	-59	True	NA	NA	NA	42326157	42355678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42335882_42335975_42351884_42352050_42355160
transcript_31987.known	chr12	+	3377	12	FSM	ENSG00000134283.18	ENST00000432191.6	3377	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	156.860890100035	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGATTGTCTTTTCTCTTA	42320989	True	NA	18	True	AATAAA	-15	NA	42326177	42448618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_42326230_42335882_42335975_42355160_42355223_42374862_42375075_42384939_42384997_42387455_42387536_42393569_42393690_42398853_42398995_42441314_42441430_42442640_42442742_42445972_42446291_42446591
transcript_31988.known	chr12	-	1710	8	FSM	ENSG00000139168.9	ENST00000679269.1	1710	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	194.328881759028	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATATTTGAAATTTCATTAT	NA	False	NA	NA	False	ATTAAA	-3	NA	42326257	42312101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42326168
transcript_31989.known	chr12	-	1661	7	FSM	ENSG00000139168.9	ENST00000676501.1	1661	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	207.130930143767	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAATAGAAATAAGTTAATAC	-42321249	True	NA	NA	False	AGTAAA	-3	NA	42326118	42312170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42325923
transcript_31990.known	chr12	-	1639	6	FSM	ENSG00000139168.9	ENST00000679184.1	1639	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	218.481486629874	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTAATATTATTATTGTC	-42321232	True	NA	NA	False	AGTAAA	-27	NA	42326101	42312146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42325923
transcript_31993.known	chr12	-	1808	8	FSM	ENSG00000139168.9	ENST00000266529.8	1808	8	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_3	21.8108753999991	944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAAAATCTTGTGTTTCC	-42321225	True	NA	NA	False	ATTAAA	-19	NA	42326094	42312085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313199_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_31994.known	chr12	-	1199	8	FSM	ENSG00000139168.9	ENST00000552235.2	1199	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	195.462820724849	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTGTCTTTAAATATGG	-42321278	True	NA	-15	True	AATAAA	-12	NA	42326147	42312780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_42313232_42313689_42313766_42313873_42313987_42317339_42317448_42317786_42317899_42322417_42322447_42324018_42324105_42325923
transcript_31998.nnic	chr12	-	1033	3	NNC	ENSG00000241251.2	novel	478	2	NA	NA	-100137	16	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCCGGACTGTAAAAAT	NA	False	NA	NA	False	NA	NA	NA	43661434	43560767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_43560801_43560836_43561330_43660927
transcript_32.known	ERCC-00073	+	587	1	FSM	ERCC-00073A	DQ668358	587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00073_+_0_600
transcript_320.known	SIRV4	-	592	4	FSM	SIRV4A	SIRV404	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_3	3229.99755761862	23247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	14623	8322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8373_8629_8991_13672_13823_14592
transcript_32002.known	chr12	-	4364	9	FSM	ENSG00000129317.15	ENST00000416848.6	4364	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	15.3577138598165	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGATATTGTAGTACCATT	-43756871	True	NA	47	True	AATAAA	-20	NA	43758758	43728606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758285
transcript_32003.known	chr12	-	13567	9	FSM	ENSG00000129317.15	ENST00000344862.10	13567	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	7.44878345771979	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGTTTGAGGAAACTAC	-43756903	True	NA	42	True	AATAAA	-15	NA	43758790	43718991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758729
transcript_32010.known	chr12	-	3313	9	FSM	ENSG00000129317.15	ENST00000551923.5	3313	9	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_8	15.039531242695	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAAGCTATATG	-43756886	True	NA	NA	False	AATAAA	-9	NA	43758773	43729257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43730703_43731704_43731759_43736380_43736662_43738309_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43754335_43755262_43758700
transcript_32011.known	chr12	-	1149	4	FSM	ENSG00000129317.15	ENST00000553166.1	1149	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8.04155872120988	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAGAAAAGAATGAATGT	-43756880	True	NA	NA	False	AAAAAG	-6	NA	43758767	43746213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43746239_43748449_43748610_43754335_43755262_43758729
transcript_32015.nic	chr12	-	1143	3	ISM	ENSG00000129317.15	ENST00000553166.1	1149	4	-19	2236	4	-2236	5prime_fragment	FALSE	canonical	3	30	junction_2	7	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAGATATTAAGAAAT	-43756899	True	NA	NA	False	NA	NA	NA	43758786	43748449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_43748610_43754335_43755262_43758729
transcript_32017.known	chr12	-	566	6	FSM	ENSG00000129317.15	ENST00000547156.1	566	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	18.6053755672924	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATCCTGTAAATAGAGC	-43756872	True	NA	NA	False	CATAAA	-26	NA	43758759	43738352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43738392_43742456_43742556_43746045_43746239_43748449_43748610_43755216_43755262_43758729
transcript_32018.known	chr12	+	4284	12	FSM	ENSG00000198001.15	ENST00000613694.5	4284	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	6.77257473897788	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAAGTGCTTTAATTTTT	43758476	True	NA	5	True	ATTAAA	-16	NA	43758950	43789541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_43759017_43768102_43768273_43771219_43771366_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_3202.nic	chr1	-	1164	8	ISM	ENSG00000176092.17	ENST00000308182.10	5239	20	17647	0	-100	0	3prime_fragment	FALSE	canonical	3	53	junction_6	16.7539212589477	168	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	-26336037	True	NA	-8	True	NA	NA	NA	26336483	26321864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336094_26336208_26336337
transcript_32021.known	chr12	+	1348	11	FSM	ENSG00000198001.15	ENST00000550615.5	1348	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	5.93632883186233	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATCTCAACCATTTTT	43758475	True	NA	NA	False	NA	NA	NA	43758949	43786750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_43759017_43768102_43768273_43772179_43772363_43772911_43773073_43773964_43774030_43777629_43777745_43778192_43778303_43782306_43782491_43783661_43783725_43786398_43786558_43786679
transcript_32026.known	chr12	-	2987	9	FSM	ENSG00000151239.14	ENST00000395510.7	2987	9	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	27.4806750280993	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTATGTTCTGTTGGT	-43804350	True	NA	-1	True	AATAAA	-17	NA	43806317	43793722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_32027.known	chr12	-	455	2	FSM	ENSG00000151239.14	ENST00000547961.1	455	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTACTTGTGAATTATTCAA	-43804288	True	NA	NA	False	ACTAAA	-27	NA	43806255	43804152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43804573_43806220
transcript_32028.known	chr12	-	1170	10	FSM	ENSG00000151239.14	ENST00000548315.5	1170	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.56133652658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAAAATTGTACTTTTT	-43804282	True	NA	NA	False	TATAAA	-5	NA	43806249	43795492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_43795756_43796975_43797098_43797301_43797453_43797707_43797834_43798564_43798586_43799397_43799503_43800434_43800531_43802285_43802465_43804494_43804573_43806220
transcript_32029.known	chr12	-	3196	21	FSM	ENSG00000184613.11	ENST00000452445.6	3196	21	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_20	38.3685743806048	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACACATGTGAGTCTGAG	-44873391	True	NA	-12	True	AATAAA	-16	NA	44876355	44508281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814_44875901_44876293
transcript_32035.nic	chr12	-	678	4	ISM	ENSG00000184613.11	ENST00000452445.6	3196	21	-173	307627	-173	0	5prime_fragment	FALSE	canonical	3	88	junction_3	73.6040457825217	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTTCTCTTGTATATC	-44876513	False	NA	NA	False	ATTAAA	-16	NA	44876528	44815908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_44816137_44875224_44875354_44875814_44875901_44876293
transcript_32036.known	chr12	-	3553	20	FSM	ENSG00000184613.11	ENST00000429094.7	3553	20	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_11	26.1662064524226	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATGTGAGTCTGAGTATC	-44873351	True	NA	-8	True	AATAAA	-20	NA	44876315	44508277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_44508985_44520004_44520230_44521999_44522177_44523290_44523485_44532580_44532722_44607168_44607265_44610847_44610971_44665483_44665610_44703725_44703855_44711291_44711395_44714649_44714742_44774746_44774850_44776021_44776151_44777041_44777125_44777241_44777315_44779662_44779760_44779848_44780023_44815985_44816137_44875224_44875354_44875814
transcript_32040.nic	chr12	-	2204	4	FSM	ENSG00000134297.7	ENST00000691674.1	2044	4	-177	17	-156	-17	multi-exon	FALSE	canonical	0	0	junction_2	15.9234278833282	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	-45216191	False	NA	NA	False	AATAAA	-28	NA	45216203	45173063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45174643_45176240_45176434_45190793_45190962_45215939
transcript_32041.known	chr12	-	1839	3	FSM	ENSG00000134297.7	ENST00000256692.6	1874	3	18	17	18	-17	multi-exon	FALSE	canonical	3	11	junction_2	4.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATAAAAACCATGA	-45215073	True	NA	NA	False	AATAAA	-28	NA	45216006	45173063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45174643_45176240_45176434_45215939
transcript_32042.known	chr12	-	277	3	FSM	ENSG00000134297.7	ENST00000545609.3	876	3	-17	616	0	-393	multi-exon	FALSE	canonical	0	0	junction_1	19.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGGGTGATCGGACCTA	-45215108	True	NA	NA	False	NA	NA	NA	45216041	45176426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45176434_45190793_45190962_45215939
transcript_32044.nnic	chr12	-	855	2	Genic_Genomic	ENSG00000273015.2	novel	9730	1	NA	NA	174	-7979	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTCTGTATCTCTTGCAA	-45727585	False	217	-11	True	AATAAA	-16	NA	45727601	45726024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_-_45726180_45726901
transcript_32047.nic	chr12	-	3308	11	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-80	7585	-70	0	5prime_fragment	FALSE	canonical	3	226	junction_2	29.6877078940089	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACAAGAAAAGAAAAAAATGA	-45990523	False	NA	NA	False	AATGAA	-4	NA	45990654	45926715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_32049.nic	chr12	-	628	5	ISM	ENSG00000139218.18	ENST00000369367.8	7552	15	-80	29399	-70	0	5prime_fragment	FALSE	canonical	3	232	junction_1	30.8088867049752	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAACAGCTGAGAGAAA	-45990523	False	NA	NA	False	NA	NA	NA	45990654	45948529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_3205.nnic	chr1	-	1054	7	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-103	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_6	18.8738502225228	314	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	-26336040	True	NA	-8	True	NA	NA	NA	26336486	26321864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328208_26328333_26328733_26328874_26331488_26331619_26336337
transcript_32052.known	chr12	-	1931	4	FSM	ENSG00000139218.18	ENST00000395454.6	1931	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	140.98778512891	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGGCACGGTGATACATG	-45985357	True	NA	NA	False	AAAAAG	-25	NA	45990584	45954733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45956193_45961699_45961858_45964106_45964189_45990352
transcript_32055.known	chr12	-	1336	4	FSM	ENSG00000139218.18	ENST00000395453.2	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	112.241802472262	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-45985353	True	NA	-8	True	AATAAA	-20	NA	45990580	45960454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45961323_45961699_45961858_45964106_45964189_45990352
transcript_32056.nic	chr12	-	1295	4	NIC	ENSG00000139218.18	novel	1336	4	NA	NA	49	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	128.086776141108	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGCACATGGTTGCTT	-45991940	True	NA	-8	True	AATAAA	-20	NA	45992071	45960454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_45961323_45961699_45961858_45964106_45964189_45991884
transcript_32060.known	chr12	-	7552	15	FSM	ENSG00000139218.18	ENST00000369367.8	7552	15	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_2	65.9545297913646	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTTAACATTTTATTAT	-45985347	True	NA	NA	False	AATAAA	-18	NA	45990574	45919130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_45922195_45922462_45922583_45922935_45923155_45924727_45925075_45926141_45928860_45931505_45931613_45933130_45933233_45934175_45934286_45934446_45934506_45945248_45945314_45948436_45948538_45951649_45951728_45961699_45961858_45964106_45964189_45990352
transcript_32062.known	chr12	-	3436	18	FSM	ENSG00000111371.16	ENST00000439706.5	3436	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_17	185.474888478347	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAACC	-46261599	True	NA	6	True	NA	NA	NA	46268997	46187800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46254813_46254937_46268525
transcript_32067.known	chr12	-	8097	17	FSM	ENSG00000111371.16	ENST00000398637.10	8097	17	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_16	103.632444696388	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAAATGTTGTGTTTGT	-46269026	False	NA	-11	True	ATTAAA	-19	NA	46269043	46183062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268525
transcript_32068.known	chr12	-	2332	17	FSM	ENSG00000111371.16	ENST00000546893.5	2332	17	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_16	78.7313469972412	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTTTTTAGAAGAGAAAAGA	-46269102	False	NA	NA	False	NA	NA	NA	46269119	46188564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46189072_46197719_46197818_46197918_46198061_46198624_46198744_46201097_46201199_46203009_46203090_46204300_46204418_46204531_46204591_46206079_46206163_46207154_46207237_46207528_46207622_46209053_46209128_46229152_46229269_46229563_46229640_46239678_46239894_46243199_46243315_46268864
transcript_3209.nnic	chr1	-	910	6	NIC	ENSG00000176092.17	novel	5239	20	NA	NA	-100	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	41.6192263263026	119	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTGTCTCTGTGCACCTT	-26336037	True	NA	-8	True	NA	NA	NA	26336483	26321864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_26322057_26322163_26322324_26324151_26324311_26328733_26328874_26336094_26336208_26336337
transcript_32094.nnic	chr12	+	858	3	Antisense	novelGene_ENSG00000111371.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAATGAAC	46268817	False	NA	NA	False	NA	NA	NA	46268829	46279143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_46269159_46275200_46275376_46278789
transcript_32096.nnic	chr12	+	922	3	Antisense	novelGene_ENSG00000111371.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0.5	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACAAGTTAATTTGTTCT	46268817	False	NA	NA	False	ATTAAA	-21	NA	46268829	46279207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_46269159_46275200_46275376_46278789
transcript_321.known	SIRV4	-	670	4	FSM	SIRV4A	SIRV403	670	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3561.98599410809	15116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGATATTTAGAGCGTA	NA	False	NA	NA	False	NA	NA	NA	15122	8322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8373_8629_8991_13672_13829_15019
transcript_32103.known	chr12	-	4795	16	FSM	ENSG00000134294.14	ENST00000256689.10	4795	16	0	0	0	0	multi-exon	TRUE	canonical	3	587	junction_14	74.2872502893703	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCAGTGTTTTTTGTTTT	-46346607	True	NA	-16	True	AATAAA	-18	NA	46372773	46358187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370511_46370628_46370775_46370858_46371177_46371380_46372508
transcript_32106.known	chr12	-	4384	15	FSM	ENSG00000134294.14	ENST00000549258.5	4384	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_12	197.885866919623	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTGGTACAAATTCAGA	-46346605	True	NA	-11	True	AATAAA	-22	NA	46372771	46358480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46361210_46362283_46362382_46362493_46362639_46363020_46363146_46363725_46363827_46363923_46364004_46364388_46364557_46364643_46364703_46365106_46365190_46366863_46366946_46367075_46367169_46367266_46367341_46370775_46370858_46371177_46371380_46372508
transcript_32124.nnic	chr12	+	621	4	Fusion	ENSG00000257261.7_ENSG00000272369.1	novel	829	4	NA	NA	-15	27	multi-exon	FALSE	canonical	0	0	junction_2	22.1560124771785	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	46383544	False	NA	7	True	AATAAA	-18	NA	46383636	46652577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_+_46383714_46387746_46387973_46455011_46455142_46652389
transcript_32128.nnic	chr12	+	601	4	NIC	ENSG00000257261.7	novel	2298	4	NA	NA	-15	157374	combination_of_known_splicesites	FALSE	canonical	2	25	junction_3	12.684198393627	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTCTTACTCTTTCAT	46383544	False	NA	7	True	AATAAA	-18	NA	46383636	46652577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_46383714_46387746_46387973_46470152_46470263_46652389
transcript_32135.known	chr12	+	718	3	FSM	ENSG00000257261.7	ENST00000666942.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	4	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCTAATAGAAATAAAACGT	46382043	True	NA	NA	False	ATTAAA	-12	NA	46383672	46470603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_46383714_46387746_46387973_46470152
transcript_32141.nnic	chr12	-	3847	16	NIC	ENSG00000139209.16	novel	3791	16	NA	NA	-69	0	combination_of_known_splicesites	FALSE	canonical	3	52	junction_10	6.15142259969188	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46831959	True	NA	-26	True	AATAAA	-18	NA	46832477	46764760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46832326
transcript_32143.known	chr12	-	3791	16	FSM	ENSG00000139209.16	ENST00000447411.5	3791	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	17.0246879560243	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATGTGATTTTTGATCT	-46825479	False	NA	-26	True	AATAAA	-18	NA	46825997	46764760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_46766803_46768309_46768408_46769283_46769429_46775048_46775174_46776903_46777005_46778288_46778369_46778500_46778777_46779610_46779670_46779779_46779863_46779948_46780031_46784541_46784635_46785103_46785178_46787915_46788032_46788527_46788619_46792952_46793184_46825902
transcript_32145.nnic	chr12	+	471	4	NNC	ENSG00000179715.13	novel	2310	4	NA	NA	-1	-126180	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	7.93025150224688	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTTGGAATTATTCT	47079450	True	NA	NA	False	AATAAA	-20	NA	47079601	47109058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_47079726_47104112_47104196_47107996_47108165_47108962
transcript_32147.known	chr12	+	476	3	FSM	ENSG00000179715.13	ENST00000551777.1	476	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAGCTGGTGGACGGAGGC	47223509	True	NA	NA	False	NA	NA	NA	47223544	47235238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47223673_47223923_47224040_47235006
transcript_32150.nnic	chr12	+	1868	2	NNC	ENSG00000179715.13	novel	1862	3	NA	NA	138	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTGTGGGTTTTGCATG	47223669	False	NA	15	True	AATAAA	-26	NA	47223682	47236660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_47223897_47235006
transcript_32151.known	chr12	-	3763	2	FSM	ENSG00000139211.7	ENST00000266581.4	3763	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTTCTGTGAACAAAT	-47079833	False	NA	NA	False	NA	NA	NA	47079865	47075706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47079066_47079461
transcript_32160.known	chr12	-	4339	17	FSM	ENSG00000005175.10	ENST00000005386.8	4339	17	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	34.5316317852198	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGCGTATACAACCTATTG	-47700747	True	NA	NA	False	AATAAA	-21	NA	47706030	47661248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_32162.known	chr12	-	2149	16	FSM	ENSG00000005175.10	ENST00000380650.4	2149	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	84.4401168481743	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACATTTGTAAGGATCAG	-47700703	True	NA	-21	True	AATAAA	-15	NA	47705986	47663292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_32164.nic	chr12	-	763	5	ISM	ENSG00000005175.10	ENST00000380650.4	2149	16	-76	32882	-32	-233	5prime_fragment	FALSE	canonical	3	349	junction_3	25.30316185776	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGCATTTTCTTTTCA	NA	False	NA	NA	False	AATAAA	-22	NA	47706062	47696174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_47696404_47697596_47697720_47701463_47701605_47702687_47702847_47705951
transcript_32166.nic	chr12	-	1173	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-32	-2	multi-exon	FALSE	canonical	3	34	junction_1	156.312365331587	161	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCACGTAGCCTGTCTTCA	NA	False	NA	NA	False	AATAGA	-13	NA	47706062	47699402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_32167.nic	chr12	-	1047	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-32	-128	multi-exon	FALSE	canonical	3	34	junction_1	156.312365331587	162	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGCTGGGACTTTTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	47706062	47699528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_32168.nic	chr12	-	896	4	Fusion	ENSG00000276390.1_ENSG00000005175.10	novel	420	3	NA	NA	-32	-279	multi-exon	FALSE	canonical	3	34	junction_1	156.312365331587	202	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTGTCTTTTGGTG	NA	False	NA	-3	True	AATAAA	-16	NA	47706062	47699679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr12_-_47700165_47701463_47701605_47702687_47702847_47705951
transcript_32172.known	chr12	-	621	3	FSM	ENSG00000005175.10	ENST00000551293.1	621	3	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_1	15.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTATTTATCCAGTGTG	-47700716	True	NA	NA	False	NA	NA	NA	47705999	47701190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47701605_47702687_47702847_47705951
transcript_32174.known	chr12	-	2133	16	FSM	ENSG00000005175.10	ENST00000432584.7	2133	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	94.3638348803891	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTGTAAGGATCAGC	-47700743	True	NA	-20	True	AATAAA	-16	NA	47706026	47663291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47663591_47666979_47667081_47667753_47667852_47668915_47669103_47670106_47670346_47679492_47679595_47679703_47679775_47681695_47681818_47686779_47686908_47687875_47688002_47689124_47689196_47690517_47690640_47696275_47696404_47697596_47697720_47701463_47701605_47705951
transcript_32175.known	chr12	-	420	3	FSM	ENSG00000005175.10	ENST00000547706.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	157.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CTCAAAAAAAAAAAAAAAAA	-47697533	False	NA	NA	False	NA	NA	NA	47702816	47700014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47700165_47701463_47701605_47702687
transcript_32180.known	chr12	+	579	4	FSM	ENSG00000257433.7	ENST00000692059.1	1311	4	70	662	4	-1	multi-exon	FALSE	canonical	1	2	junction_2	5.65685424949238	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTGATTTCTTTC	47706037	True	NA	NA	False	NA	NA	NA	47706127	47729203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719599_47719700_47728886
transcript_32181.known	chr12	+	1457	4	FSM	ENSG00000257433.7	ENST00000663280.1	1457	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.8878405775519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCACCAAATATTTCAAGG	47705997	True	NA	NA	False	NA	NA	NA	47706087	47721061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719604_47719700_47719901
transcript_32182.nic	chr12	+	635	4	FSM	ENSG00000257433.7	ENST00000553045.3	625	4	-11	1	9	-1	multi-exon	FALSE	canonical	2	2	junction_3	5.24933858267454	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGTGTGATTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	47706066	47729203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719604_47719700_47728886
transcript_32186.known	chr12	+	577	4	FSM	ENSG00000211584.14	ENST00000549243.5	577	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTTCGTGGGCGTCCTC	47758831	True	NA	NA	False	GGGGCT	-9	NA	47758993	47779111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47759150_47760215_47760402_47772169_47772321_47779027
transcript_32188.known	chr12	+	1737	3	FSM	ENSG00000257433.7	ENST00000659426.1	1737	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGCAAGTAAAGAAGCAGG	47705997	True	NA	NA	False	NA	NA	NA	47706087	47721139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706164_47719146_47719273_47719604
transcript_32191.known	chr12	+	848	4	FSM	ENSG00000257433.7	ENST00000667854.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATTTTTATCATTTTAC	47705994	True	NA	NA	False	ACTAAA	-2	NA	47706084	47720447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47706168_47719151_47719273_47719604_47719700_47719898
transcript_32193.known	chr12	+	1414	8	FSM	ENSG00000134291.12	ENST00000449758.6	1414	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	118.573321843749	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAGAAAAATAAACCCTGCT	47957741	True	NA	-12	True	NA	NA	NA	47963634	47968849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966173_47966682_47966733_47967207_47967262_47968132
transcript_32195.known	chr12	+	1539	8	FSM	ENSG00000134291.12	ENST00000429772.7	1539	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	104.251657844206	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	47957702	True	NA	17	True	AATAAA	-17	NA	47963595	47968878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_47963705_47964208_47964424_47965281_47965346_47965837_47965998_47966088_47966230_47966682_47966733_47967207_47967262_47968132
transcript_32212.nic	chr12	+	1086	3	NIC	ENSG00000134291.12	novel	1539	8	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	70	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTCTCCTCTGATTGC	47957686	True	NA	17	True	AATAAA	-17	NA	47963579	47968878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_47963705_47964208_47964424_47968132
transcript_32216.known	chr12	-	5059	54	FSM	ENSG00000139219.19	ENST00000380518.8	5059	54	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_52	12.758372815359	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTGACTTGTGGTTTGT	-48003268	True	NA	-1	True	ATTAAA	-24	NA	48004476	47972966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_47973554_47974088_47974332_47974674_47974863_47975316_47975606_47975962_47976071_47976513_47976568_47976811_47976920_47977101_47977156_47977319_47977428_47977599_47977654_47978009_47978118_47978290_47978399_47978596_47978759_47979510_47979565_47980008_47980063_47980553_47980662_47980914_47980969_47981342_47981397_47981775_47981830_47982106_47982161_47982501_47982610_47982847_47982947_47983092_47983138_47983384_47983439_47983682_47983737_47984086_47984141_47984545_47984600_47984994_47985094_47985533_47985588_47985727_47985827_47985911_47985966_47986335_47986444_47986834_47986889_47987077_47987177_47987268_47987314_47987610_47987710_47989227_47989282_47989760_47989806_47992877_47992932_47993457_47993503_47993808_47993863_47993993_47994048_47994423_47994478_47995254_47995309_47995709_47995764_47995874_47995920_47996547_47996626_47997605_47997708_47997870_47997925_47998031_47998065_47998168_47998202_47998414_47998432_47999918_48000126_48004236
transcript_32218.known	chr12	-	747	2	FSM	ENSG00000139219.19	ENST00000490609.2	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATTTGCTTCCAAGACAC	-48003346	True	NA	NA	False	NA	NA	NA	48004554	47999696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48000126_48004236
transcript_32220.known	chr12	+	3476	25	FSM	ENSG00000152556.17	ENST00000340802.12	3476	25	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	161.053540959383	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48105683	True	NA	21	True	AATAAA	-15	NA	48105922	48146404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48106138_48107364_48107456_48108071_48108195_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_32221.known	chr12	+	3090	23	FSM	ENSG00000152556.17	ENST00000359794.11	3090	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.734017393535	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGGCATTTCATCATTGAA	48114607	True	NA	21	True	AATAAA	-15	NA	48119363	48146404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_32223.known	chr12	+	2867	23	FSM	ENSG00000152556.17	ENST00000551339.6	2867	23	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_1	106.240799309947	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACTGGTCACTGTGCTTT	48114570	True	NA	3	True	AATAAA	-3	NA	48119326	48146088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48119463_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48135290_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_32224.nic	chr12	+	2743	22	NIC	ENSG00000152556.17	novel	3063	22	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	146.144711310368	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114561	True	NA	19	True	AATAAA	-19	NA	48119317	48146104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135039_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_32225.known	chr12	+	3063	22	FSM	ENSG00000152556.17	ENST00000546964.5	3063	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	113.937166914643	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTGCTTCTCCTGTTATC	48114586	True	NA	19	True	AATAAA	-19	NA	48119342	48146104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942_48135384_48137720_48137847_48139284_48139350_48139848_48139913_48140721_48140872_48141310_48141382_48141739_48141828_48141913_48142067_48142781_48142947_48143752_48143815_48144045_48144158_48145030_48145131_48145209_48145316_48145563
transcript_32227.known	chr12	-	4456	18	FSM	ENSG00000079387.14	ENST00000549518.6	4456	18	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_17	28.2243851475106	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTTCTCCTGTGTCCAC	-48105947	False	NA	NA	False	ACTAAA	-23	NA	48106079	48042896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48045385_48046355_48046452_48046977_48047063_48048000_48048081_48048928_48049133_48063709_48063842_48065064_48065221_48065595_48065681_48066926_48066966_48071666_48071722_48074323_48074608_48074689_48074794_48083590_48083763_48088800_48088961_48096342_48096428_48097993_48098125_48101468_48101517_48106027
transcript_32233.nic	chr12	+	1120	9	ISM	ENSG00000152556.17	ENST00000546964.5	3063	22	-25	10886	-9	389	5prime_fragment	FALSE	canonical	0	0	junction_1	146.766821863799	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAAGTCTCTGCTTGTTTT	48114561	True	NA	3	True	NA	NA	NA	48119317	48135218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_48119407_48122766_48122860_48130362_48130437_48131315_48131394_48132867_48133058_48133314_48133481_48134231_48134277_48134720_48134830_48134942
transcript_32241.known	chr12	-	657	5	FSM	ENSG00000177981.11	ENST00000535055.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.256095748383	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTACAACAATGATACACC	-48156824	True	NA	NA	False	NA	NA	NA	48157591	48149791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48149999_48150086_48150141_48151200_48151306_48153367_48153526_48157458
transcript_32242.known	chr12	-	580	5	FSM	ENSG00000177981.11	ENST00000539464.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.9373363863133	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGTATGGTGCAAACCCC	-48156824	True	NA	NA	False	NA	NA	NA	48157591	48149919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48149999_48151200_48151306_48151564_48151666_48153367_48153530_48157458
transcript_32243.known	chr12	-	839	4	FSM	ENSG00000177981.11	ENST00000539528.5	839	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11.0855260988773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTCCTCCACAGAGCTGT	-48156735	True	NA	NA	False	NA	NA	NA	48157502	48149608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48150141_48151200_48151306_48153367_48153526_48157458
transcript_32245.known	chr12	-	2610	4	FSM	ENSG00000177981.11	ENST00000536549.5	2610	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	11.3431330181157	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCAATTTCTACTTTT	-48156828	False	NA	1	True	AATAAA	-16	NA	48157595	48147788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48149999_48151200_48151306_48153367_48153526_48157458
transcript_32250.known	chr12	+	2283	1	FSM	ENSG00000177875.5	ENST00000316554.5	2283	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGACTGGTACTAAGG	48183592	True	NA	5	True	AATAAA	-19	NA	48183643	48185926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48183600_48185900
transcript_32254.nic	chr12	-	2357	12	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-31	0	combination_of_known_junctions	TRUE	canonical	0	0	junction_3	103.687865990766	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678591	True	NA	0	True	AAGAAA	-40	NA	48682269	48653401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48661194_48661244_48662559_48662655_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_3226.nnic	chr1	+	2177	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-106	3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_4	692.718016223052	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26410647	False	NA	81	True	AATAAA	-23	NA	26410710	26429722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26427236_26429133
transcript_32267.nic	chr12	-	2411	11	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	95.179251940746	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678581	True	NA	0	True	AAGAAA	-40	NA	48682259	48653401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48681857_48682066_48682186
transcript_3228.nnic	chr1	+	2229	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-106	0	at_least_one_novel_splicesite	FALSE	canonical	1	20	junction_4	684.082049172466	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	26410647	False	NA	87	True	AATAAA	-29	NA	26410710	26429728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26427286_26429137
transcript_32280.known	chr12	-	2373	10	FSM	ENSG00000139620.13	ENST00000420613.7	2373	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	77.0648276084556	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTTCTTCTTTTTACCC	-48678560	True	NA	65	True	ATTAAA	-17	NA	48682238	48653210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_32285.nic	chr12	-	2111	10	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	92.4483172265709	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678591	True	NA	0	True	AAGAAA	-40	NA	48682269	48653401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_48654176_48654940_48655061_48660467_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381_48681642_48682186
transcript_32290.nic	chr12	-	2098	9	NIC	ENSG00000139620.13	novel	2373	10	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	92.4830220905437	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678591	True	NA	0	True	AAGAAA	-40	NA	48682269	48653401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679654_48679834_48681381_48681642_48682186
transcript_32298.known	chr12	-	2714	9	FSM	ENSG00000139620.13	ENST00000550347.5	2714	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	81.6333265278342	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTGTTTGAGAATATA	-48678547	True	NA	0	True	AAGAAA	-40	NA	48682225	48653401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48654176_48654940_48655061_48660365_48660620_48667692_48667790_48669105_48669273_48671798_48671963_48679035_48679151_48679654_48679834_48681381
transcript_32300.known	chr12	-	6788	9	FSM	ENSG00000129315.11	ENST00000261900.8	6788	9	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_3	6.05056815514047	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATTGTTGTTTATGTGT	-48713336	True	NA	0	True	AATAAA	-21	NA	48716707	48688457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48694437_48695758_48695830_48695998_48696163_48698137_48698184_48699777_48699841_48701012_48701074_48705767_48705897_48714442_48714525_48716514
transcript_32301.nnic	chr12	-	439	3	NNC	ENSG00000129315.11	novel	6788	9	NA	NA	-52	-7577	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGTAAAAAAAATTTTACAAA	-48713400	True	NA	NA	False	NA	NA	NA	48716771	48713200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_48713301_48714442_48714525_48716514
transcript_32302.known	chr12	+	473	3	FSM	ENSG00000257660.5	ENST00000549864.1	473	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	48789562	False	NA	NA	False	AATAAA	-23	NA	48789575	48790535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48789691_48789984_48790120_48790312
transcript_32303.nic	chr12	+	867	2	ISM	ENSG00000257660.5	ENST00000547774.5	439	3	329	0	-100	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	48789475	48790535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_48790120_48790312
transcript_32304.known	chr12	+	439	3	FSM	ENSG00000257660.5	ENST00000547774.5	439	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGGTTTTCAGAATCAGAT	NA	False	NA	NA	False	AATAAA	-23	NA	48789146	48790535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48789228_48789984_48790120_48790312
transcript_32305.known	chr12	+	557	2	FSM	ENSG00000167535.8	ENST00000552465.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACCATAGATCTTACTAA	48815576	False	NA	NA	False	NA	NA	NA	48815611	48817312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_48815729_48816872
transcript_32307.known	chr12	-	3256	17	FSM	ENSG00000174243.10	ENST00000308025.8	3256	17	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_11	24.0083806982062	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTAGTTCTAGTTAAACT	-48847414	True	NA	-5	True	AATAAA	-23	NA	48852163	48829755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48830693_48831141_48831317_48832077_48832187_48832421_48832574_48833276_48833520_48834319_48834498_48836120_48836267_48836568_48836795_48836893_48837038_48837280_48837394_48837523_48837658_48837941_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_32310.known	chr12	-	1083	6	FSM	ENSG00000174243.10	ENST00000551098.5	1083	6	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	13.7462722219517	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTAAGGTGCAGGCCTT	-48847389	True	NA	NA	False	NA	NA	NA	48852138	48837532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48838081_48839843_48839910_48840012_48840107_48843939_48844051_48845573_48845783_48852083
transcript_32313.known	chr12	-	1653	5	FSM	ENSG00000172602.11	ENST00000309739.6	1653	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	5.7662812973354	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCGTATTTTTTTC	-48864607	True	NA	-11	True	TATAAA	-4	NA	48865870	48857144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48858242_48860996_48861132_48862008_48862119_48864782_48864871_48865647
transcript_32314.nic	chr12	-	1017	4	ISM	ENSG00000172602.11	ENST00000309739.6	1653	5	-36	3427	-36	458	5prime_fragment	FALSE	canonical	3	29	junction_1	5.55777733351102	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATAGCTG	NA	False	NA	NA	False	NA	NA	NA	48865906	48860571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_48861132_48862008_48862119_48864782_48864871_48865647
transcript_3232.nnic	chr1	+	2575	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-106	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	692.718016223052	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26410647	False	NA	81	True	AATAAA	-23	NA	26410710	26429722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26427638_26429137
transcript_32328.known	chr12	-	563	2	FSM	ENSG00000134287.10	ENST00000485410.5	563	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGAGTGAAGCTCAGGGCT	-48923660	True	NA	76	True	NA	NA	NA	48957445	48938420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48938848_48957309
transcript_32329.known	chr12	-	691	6	FSM	ENSG00000134285.11	ENST00000550765.6	691	6	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_5	64.1417180936089	2578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTGCATTCTTCATCT	-48920966	True	NA	-16	True	AATAAA	-18	NA	48925492	48921962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_32330.known	chr12	-	630	5	FSM	ENSG00000134285.11	ENST00000444214.6	630	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	206.246212086428	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48924957	False	4526	-12	True	AATAAA	-22	NA	48924967	48921958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48924773
transcript_32331.known	chr12	-	517	4	FSM	ENSG00000134285.11	ENST00000551094.5	517	4	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	53.7835166818484	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCATTCTTCATCTGATA	-48924719	False	NA	-12	True	AATAAA	-22	NA	48924729	48921958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560
transcript_32332.known	chr12	-	1052	6	FSM	ENSG00000134285.11	ENST00000552878.5	1052	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	202.287913628076	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAAGACTCTATCCGTGTG	-48920985	True	NA	-8	True	TTTAAA	-32	NA	48925511	48922564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48923146_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925112_48925299
transcript_32333.known	chr12	-	2661	4	FSM	ENSG00000134285.11	ENST00000551694.5	2661	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_3	38.4736562107401	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCATTCTTCATCTGA	-48920984	True	NA	-14	True	AATAAA	-20	NA	48925510	48921960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48924257_48924560_48924649_48925045_48925112_48925299
transcript_32334.known	chr12	-	4041	5	FSM	ENSG00000134287.10	ENST00000256682.9	4041	5	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	55.312747174589	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGTGTAATGACCTTA	-48923702	True	NA	-36	True	AATAAA	-18	NA	48957487	48935722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48957309
transcript_32335.known	chr12	-	725	6	FSM	ENSG00000134285.11	ENST00000256680.10	725	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	206.85202440392	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAATTTTAAAAAACTTATT	-48920959	True	NA	-30	True	AATAAA	-4	NA	48925485	48921976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48922202_48923781_48923853_48924222_48924257_48924560_48924649_48925045_48925167_48925299
transcript_32336.known	chr12	-	807	6	FSM	ENSG00000134287.10	ENST00000541959.5	807	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	457.763694497499	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCACCCACCCCTGACA	-48923660	True	NA	NA	False	AAAACA	-31	NA	48957445	48938924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_48939109_48939654_48939780_48939996_48940108_48940947_48941189_48941567_48941578_48957309
transcript_32341.known	chr12	-	1497	12	FSM	ENSG00000181929.13	ENST00000552212.5	1497	12	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_11	102.316313944422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTCAGACAAATTCTGAT	-49015350	True	NA	NA	False	NA	NA	NA	49018748	49002613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018523
transcript_32344.known	chr12	-	1657	12	FSM	ENSG00000181929.13	ENST00000548065.7	1657	12	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_11	36.4974809500941	1694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	-49015378	True	NA	-2	True	ATTAAA	-21	NA	49018776	49002273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_32345.known	chr12	-	1679	12	FSM	ENSG00000181929.13	ENST00000546531.5	1679	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	103.774549022356	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGCAAATCTAATTAAATG	-49015389	True	NA	-2	True	NA	NA	NA	49018787	49002311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005593_49005742_49005853_49013061_49013111_49018731
transcript_32346.known	chr12	-	822	4	FSM	ENSG00000181929.13	ENST00000548362.5	822	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	153.415195538846	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCAGTGTTTGATTTTT	NA	False	NA	-2	True	ATTAAA	-21	NA	49003593	49002273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49002871_49002964_49003007_49003143_49003291_49003557
transcript_32347.known	chr12	-	1531	11	FSM	ENSG00000181929.13	ENST00000547306.5	1531	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	104.723254342099	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-49015366	True	NA	-6	True	ATTAAA	-17	NA	49018764	49002277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005365_49005461_49005544_49013061_49013111_49018731
transcript_32348.known	chr12	-	1683	12	FSM	ENSG00000181929.13	ENST00000316299.9	1683	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	104.87166498012	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGATATTGCAGTGTTTGAT	-49015381	True	NA	-6	True	ATTAAA	-17	NA	49018779	49002277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49003007_49003143_49003291_49003557_49003596_49003756_49003923_49004506_49004634_49004963_49005019_49005119_49005166_49005305_49005392_49005461_49005544_49005742_49005853_49013061_49013111_49018731
transcript_32349.known	chr12	-	553	2	FSM	ENSG00000181929.13	ENST00000552657.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGAGCTCAGGAGTTTG	-49015388	True	NA	NA	False	NA	NA	NA	49018786	49012612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49013111_49018731
transcript_3235.nnic	chr1	+	3517	5	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-106	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	692.718016223052	184	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26410647	False	NA	81	True	AATAAA	-23	NA	26410710	26429722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428575_26429132
transcript_32353.known	chr12	-	1173	8	FSM	ENSG00000167550.11	ENST00000301068.11	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	8.0609919883805	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTTTTCGTGTGTGTGT	-49069353	True	NA	-3	True	AATAAA	-23	NA	49069979	49064675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069107_49069733
transcript_32355.known	chr12	-	1261	8	FSM	ENSG00000167550.11	ENST00000550797.1	1261	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	25.7206341369758	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGAGAAATCTTTTGT	-49069399	True	NA	-29	True	AATAGA	-36	NA	49070025	49064701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49066967_49067036_49069034_49069175_49069733
transcript_32357.known	chr12	-	1063	7	FSM	ENSG00000167550.11	ENST00000420065.5	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	23.7024377555465	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTTGACTTCTTTTTC	-49069321	True	NA	-13	True	AATAAA	-13	NA	49069947	49064685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49065193_49065349_49065432_49066230_49066279_49066475_49066533_49066618_49066702_49069034_49069107_49069733
transcript_3236.known	chr1	+	3458	5	FSM	ENSG00000131914.11	ENST00000254231.4	3458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	692.718016223052	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCATCCCCTTGTCA	26273853	True	NA	78	True	AATAAA	-20	NA	26410816	26429719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241_26428588_26429095
transcript_32368.known	chr12	-	2235	17	FSM	ENSG00000139636.16	ENST00000547382.5	2235	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_5	21.1917399887315	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCACCTGTCTCTGTGTA	-49108669	True	NA	-8	True	AATAAA	-30	NA	49110850	49097141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101264_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_3237.nnic	chr1	+	1105	4	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-106	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	768.937072992467	1611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26410647	False	NA	81	True	AATAAA	-23	NA	26410710	26429722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425323_26429046
transcript_32370.known	chr12	-	2295	17	FSM	ENSG00000139636.16	ENST00000267102.13	2295	17	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	12.159744035135	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCTGTCTCTGTGTATAT	-49108666	True	NA	-5	True	AATAAA	-33	NA	49110847	49097138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49097740_49097943_49098106_49100387_49100455_49100555_49100647_49101249_49101324_49101471_49101550_49102119_49102197_49102292_49102377_49102467_49102541_49102886_49102952_49103090_49103160_49103686_49103814_49104447_49104552_49104745_49104886_49105923_49105958_49106960_49107046_49110483
transcript_3238.nnic	chr1	+	1108	4	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-106	3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	768.937072992467	1606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26410647	False	NA	81	True	AATAAA	-23	NA	26410710	26429722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425332_26429052
transcript_3239.nnic	chr1	+	1059	4	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-54	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	768.937072992467	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATCCCCTTGTCAGAT	26273799	True	NA	81	True	AATAAA	-23	NA	26410762	26429722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425343_26429060
transcript_32398.known	chr12	-	1887	4	FSM	ENSG00000167552.15	ENST00000295766.9	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_3	913.41350013136	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATTGAAAAGTTGTGGT	-49188865	False	NA	NA	False	NA	NA	NA	49188899	49184958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188416
transcript_32399.known	chr12	-	1782	4	FSM	ENSG00000167552.15	ENST00000552924.2	1782	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1191.65048940068	1600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAAGTTTTTCATGT	-49164134	True	NA	NA	False	AATGAA	-25	NA	49189078	49184770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188888
transcript_3240.nnic	chr1	+	1034	4	NNC	ENSG00000131914.11	novel	3975	4	NA	NA	-39	-2	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	768.937072992467	1380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTGTCATCCCCTTGT	26273814	True	NA	76	True	AATAAA	-18	NA	26410777	26429717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_26410923_26411385_26411583_26425302_26425351_26429073
transcript_32402.known	chr12	+	418	2	FSM	ENSG00000258017.3	ENST00000547712.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTTCCTATTTTTCTT	49130997	False	NA	NA	False	AATGAA	-24	NA	49131170	49147869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49131382_49147662
transcript_32403.known	chr12	+	319	2	FSM	ENSG00000258017.3	ENST00000551496.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATCTTTTTTCCTATTTT	49131635	False	NA	NA	False	AATGAA	-20	NA	49131709	49147865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49131826_49147662
transcript_32404.known	chr12	-	1627	4	FSM	ENSG00000123416.15	ENST00000336023.9	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	8627	junction_1	801.186342591757	82972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGTTTCCTGCGTTTTT	-48914974	True	NA	-8	True	AGTAAA	-17	NA	49131395	49127781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49128939_49129241_49129391_49129499_49129723_49131297
transcript_32405.known	chr12	-	3198	3	FSM	ENSG00000123416.15	ENST00000332858.10	3198	3	0	0	0	0	multi-exon	FALSE	canonical	3	8627	junction_1	432	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAAGCTTTGTTTCCTGCGT	-48914974	True	NA	-12	True	AGTAAA	-13	NA	49131395	49127785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49128939_49129241_49129391_49129499
transcript_32406.known	chr12	-	1802	4	FSM	ENSG00000167552.15	ENST00000679733.1	1802	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1314.51917698703	1284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTATTTAAAGTATCTTA	-49164134	True	NA	NA	False	AATAAA	-45	NA	49189078	49184685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186587_49186834_49188976
transcript_32407.known	chr12	-	1672	4	FSM	ENSG00000167552.15	ENST00000301071.12	1672	4	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_1	403.893000131911	12714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCCTGTGTTTTCTAT	-49164136	True	NA	NA	False	AATAAA	-22	NA	49189080	49184794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49185991_49186309_49186459_49186610_49186834_49188976
transcript_32408.known	chr12	+	2823	4	FSM	ENSG00000167553.17	ENST00000301072.11	2823	4	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_2	115.276479243021	7518	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGGCTTGGAATCCTGAT	49223101	True	NA	7	True	AATAAA	-16	NA	49265081	49274600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49265185_49269464_49269688_49269827_49269977_49272252
transcript_32409.known	chr12	-	1453	2	FSM	ENSG00000258101.2	ENST00000549023.2	1453	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGACAGAGTGTTTGGGA	-49264687	True	NA	NA	False	AATAAA	-31	NA	49264756	49232789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49234139_49264652
transcript_32410.known	chr12	-	673	3	FSM	ENSG00000167552.15	ENST00000548363.1	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	2780	junction_1	183	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTGTTCCTCTCTTTTGT	-49188949	False	NA	NA	False	AATAAA	-13	NA	49188983	49186015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49186459_49186610_49186834_49188976
transcript_32415.known	chr12	+	675	4	FSM	ENSG00000135451.13	ENST00000380327.9	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	173.155678188412	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTTCCCCATGTCAC	49317693	True	NA	27	True	AATAAA	-40	NA	49323254	49324392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324154
transcript_32416.known	chr12	+	623	4	FSM	ENSG00000135451.13	ENST00000548311.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	145.222434752884	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGCTCTGTGTTCTCCTA	49317693	True	NA	51	True	AATAAA	-45	NA	49323254	49324416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49324230
transcript_32417.known	chr12	+	778	3	FSM	ENSG00000135451.13	ENST00000550709.5	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_2	30.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGAAGCCTTTTCCAGT	49317695	True	NA	15	True	AATAAA	-28	NA	49323256	49324380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844
transcript_32418.known	chr12	+	2551	15	FSM	ENSG00000135451.13	ENST00000257909.8	2551	15	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	85.4582186969582	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACGTGTCTAGCTAAGTG	49317693	True	NA	13	True	AATAAA	-13	NA	49323254	49331731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49330944_49331213_49331408_49331572
transcript_32419.known	chr12	+	348	3	FSM	ENSG00000135451.13	ENST00000549275.5	348	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	210	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGTTGGAGACCAGCCTG	49317674	True	NA	-69	True	NA	NA	NA	49323235	49324296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49324211
transcript_32420.known	chr12	+	839	2	FSM	ENSG00000135451.13	ENST00000549534.1	839	2	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAAATATCACTTCTTCT	49317711	True	NA	0	True	AATAAA	-13	NA	49323272	49324365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603
transcript_32421.known	chr12	+	2771	14	FSM	ENSG00000135451.13	ENST00000551245.5	2771	14	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_11	87.0149956470471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGTCTGCCCATGGGACT	49317682	True	NA	-48	True	NA	NA	NA	49323243	49331670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49323350_49323603_49323753_49323844_49324038_49325500_49325659_49325746_49325885_49326075_49326159_49326667_49326721_49327208_49327331_49328926_49329056_49329160_49329245_49329394_49329455_49329856_49329992_49330144_49331408_49331572
transcript_32422.known	chr12	+	4447	4	FSM	ENSG00000178401.16	ENST00000549441.7	4447	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTATTCTCTCTATTCTC	NA	False	NA	NA	False	AATAAA	-28	NA	49346887	49353690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49347552_49347643_49348106_49348765_49349713_49351316
transcript_32423.known	chr12	+	2781	15	FSM	ENSG00000123352.18	ENST00000549412.5	2781	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	69.9336420166595	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTGCCATTCTAAGTA	49366756	True	NA	10	True	AAAAAG	-18	NA	49366904	49526365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49512861_49512906_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_32424.known	chr12	+	3240	14	FSM	ENSG00000123352.18	ENST00000552918.6	3240	14	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	44.7993554476034	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTCATAGCAGCAA	49363621	True	NA	17	True	AATAAA	-27	NA	49367461	49527425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49371227_49371291_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_32430.known	chr12	+	3158	13	FSM	ENSG00000123352.18	ENST00000321898.10	3158	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	27.7503753728366	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCACTTTTGTTTCATAG	49363634	True	NA	11	True	AATAAA	-21	NA	49367474	49527419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740_49495003_49496832_49497010_49500069_49500206_49514554_49514614_49519072_49519183_49522750_49522854_49524681_49524897_49525943
transcript_32443.known	chr12	+	675	6	FSM	ENSG00000123352.18	ENST00000550997.5	675	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	82.2119212766616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGCAGAACCAAGTAACGGC	49366534	True	NA	NA	False	AAAAAG	-23	NA	49366583	49494771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49366721_49460769_49461038_49484589_49484670_49489464_49489574_49490681_49490732_49494740
transcript_32446.known	chr12	+	1061	5	FSM	ENSG00000123352.18	ENST00000549375.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	35.4356811702555	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTCGACCTTGAAACATA	49363621	True	NA	NA	False	NA	NA	NA	49367461	49491159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49367588_49460769_49461038_49484589_49484670_49489464_49489574_49490681
transcript_3245.known	chr1	+	3975	4	FSM	ENSG00000131914.11	ENST00000326279.11	3975	4	0	0	0	0	multi-exon	FALSE	canonical	3	1527	junction_3	59.4885609919158	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTCAGATGTTTTT	26273853	True	NA	87	True	AATAAA	-29	NA	26410816	26429728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26410923_26411385_26411583_26425302_26425488_26426241
transcript_32456.known	chr12	-	1936	16	FSM	ENSG00000187778.14	ENST00000550165.5	1936	16	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_15	223.112487822224	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCTCAGACTCTTCTTT	-49561984	True	NA	-25	True	AAAACA	-45	NA	49568101	49558362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646_49567750_49568047
transcript_32457.nic	chr12	-	2309	15	ISM	ENSG00000187778.14	ENST00000550165.5	1936	16	-14	-61	13	0	intron_retention	FALSE	canonical	3	70	junction_14	168.765142933568	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	-49561998	True	NA	-9	True	AATAAA	-18	NA	49568115	49558301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49567646
transcript_32462.nic	chr12	-	1828	14	NIC	ENSG00000187778.14	novel	1938	15	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_13	186.268464395888	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTTATTTTATTTTTTT	NA	False	NA	-9	True	AATAAA	-18	NA	49568155	49558301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49568047
transcript_32467.known	chr12	-	1666	13	FSM	ENSG00000187778.14	ENST00000548602.5	1666	13	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_12	197.128183762072	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTATTTTATTTTTTTT	-49562014	True	NA	-8	True	AATAAA	-19	NA	49568131	49558300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49568047
transcript_32470.known	chr12	-	1938	15	FSM	ENSG00000187778.14	ENST00000343810.9	1938	15	0	0	0	0	multi-exon	FALSE	canonical	3	574	junction_5	59.1494561535887	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTATTTTATTTTTTTTTT	-49562025	True	NA	-6	True	AATAAA	-21	NA	49568142	49558298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49558730_49558842_49558971_49559213_49559302_49559452_49559536_49559728_49559822_49559938_49559968_49560294_49560371_49563000_49563140_49563437_49563547_49564480_49564591_49564736_49564896_49565528_49565668_49566076_49566216_49566721_49566842_49568047
transcript_32471.known	chr12	+	3182	26	FSM	ENSG00000110844.14	ENST00000548825.7	3182	26	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_2	31.9087699543558	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGACTCTTTTCCATG	49623230	True	NA	13	True	TTTAAA	-20	NA	49623560	49644665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49623594_49630544_49630626_49631400_49631545_49631859_49631926_49632595_49632624_49632854_49632881_49633013_49633125_49633426_49633548_49633636_49633662_49633885_49634093_49634331_49634456_49634537_49634603_49635098_49635264_49635364_49635474_49635842_49635994_49636715_49636850_49637469_49637585_49637732_49637825_49641907_49642025_49642234_49642373_49642579_49642676_49642929_49643017_49643222_49643398_49643690_49643753_49643860_49644005_49644099
transcript_32481.known	chr12	+	2771	11	FSM	ENSG00000139644.13	ENST00000549385.5	2771	11	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1216.56955822509	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAAAACACCTA	49706666	True	NA	64	True	ATTAAA	-14	NA	49741573	49764726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49741612_49741956_49742116_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_32494.known	chr12	+	3254	10	FSM	ENSG00000139644.13	ENST00000423828.5	3254	10	0	0	0	0	multi-exon	FALSE	canonical	2	84	junction_1	964.617304017441	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	49706901	False	NA	19	True	AATAAA	-19	NA	49741808	49764934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49742281_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_32499.known	chr12	+	912	3	FSM	ENSG00000110844.14	ENST00000552301.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTTCTTCTCTGTGCA	49567811	True	NA	NA	False	TATAAA	-6	NA	49568217	49583264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49568724_49573657_49573729_49582929
transcript_32501.known	chr12	+	2837	10	FSM	ENSG00000139644.13	ENST00000267115.10	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	2671	junction_1	220.325012450042	3239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTTTGTGTTAAATT	49706649	True	NA	19	True	AATAAA	-19	NA	49741556	49764934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49741612_49752463_49752550_49752972_49753082_49755634_49755756_49758226_49758276_49758382_49758481_49758682_49758763_49759220_49759322_49761703_49761780_49762872
transcript_32502.known	chr12	+	468	4	FSM	ENSG00000258057.6	ENST00000549124.1	468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATAGAATACTAAATAGCA	49828595	False	NA	NA	False	AATAAA	-17	NA	49828722	49840204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49828745_49828934_49829084_49838421_49838641_49840126
transcript_32505.known	chr12	-	4882	13	FSM	ENSG00000167566.17	ENST00000335999.7	4882	13	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_1	10.9873664825663	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGCCCCTGAGTCGGCT	-49825730	True	NA	-13	True	AATAAA	-15	NA	49828413	49791151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49792052_49792445_49792589_49792677_49792987_49793351_49793434_49793733_49793897_49794764_49797395_49798349_49798464_49801847_49801968_49802957_49802997_49803096_49803166_49803921_49804081_49805979_49806042_49828321
transcript_32506.known	chr12	+	3078	3	FSM	ENSG00000258057.6	ENST00000548872.5	3078	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAGCTACTAATAGTG	49828414	True	NA	NA	False	TATAAA	-11	NA	49828541	49841143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49828749_49828934_49829084_49838421
transcript_32509.known	chr12	+	1994	2	FSM	ENSG00000258057.6	ENST00000653240.1	1994	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCCAATAAAACTCCATGT	49828423	True	NA	NA	False	AAAAAG	-32	NA	49828550	49830730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49828749_49828934
transcript_32511.known	chr12	-	3226	2	FSM	ENSG00000186666.6	ENST00000333924.6	3226	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGGTTTGTGGTGATTTC	-49842697	True	NA	-4	True	AATAAA	-17	NA	49843106	49836042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49839016_49842853
transcript_32513.known	chr12	-	4667	12	FSM	ENSG00000135472.9	ENST00000320634.8	4667	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.574959574576069	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTCCCTCGTCTGCCG	-49903885	True	NA	NA	False	AATAAA	-19	NA	49903900	49866895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49870654_49887385_49887440_49889106_49889203_49889480_49889569_49890116_49890155_49890682_49890723_49891063_49891115_49897030_49897085_49897518_49897584_49897986_49898091_49901129_49901326_49903777
transcript_32514.known	chr12	+	1449	4	FSM	ENSG00000161798.7	ENST00000293599.7	1449	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	0.942809041582063	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCCACCTCTGTCTCTCCT	49961859	True	NA	14	True	AATAAA	-15	NA	49961871	49965682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_49962381_49963491_49963657_49964091_49964176_49964991
transcript_32520.known	chr12	-	3080	17	FSM	ENSG00000161800.13	ENST00000454520.6	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_16	55.4199873691794	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGAGGCTGGTTTTCTT	-50017553	True	NA	NA	False	AGTAAA	-17	NA	50025400	49989163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_32522.known	chr12	-	3106	17	FSM	ENSG00000161800.13	ENST00000312377.10	3106	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_16	39.8245664602893	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTGGTTTTCTTGT	-50017647	True	NA	NA	False	AGTAAA	-19	NA	50025494	49989161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49990344_49990683_49990793_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025397
transcript_32525.nic	chr12	-	1991	16	NIC	ENSG00000161800.13	novel	932	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	84.3085339030925	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCACTGAATCTCAAATC	-50017616	True	NA	NA	False	ATTAAA	-27	NA	50025463	49976922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_49977060_49991997_49992134_49992244_49992378_49992549_49992656_49994130_49994330_49994413_49994510_49997039_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50004234_50004305_50005255_50005393_50006433_50006637_50016630_50016720_50025327
transcript_3253.known	chr1	+	3245	9	FSM	ENSG00000117682.17	ENST00000360009.6	3245	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_8	55.3634299425171	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGATGTAAAACTTGTTTG	26428061	True	NA	10	True	AATAGA	-15	NA	26432354	26471294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468891
transcript_32538.known	chr12	-	582	7	FSM	ENSG00000161800.13	ENST00000548598.5	582	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	101.717610187333	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCAAATTATCTCTGAA	-50017614	True	NA	NA	False	ATTAAA	-37	NA	50025461	49997159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_49997205_49999140_49999272_49999615_49999734_50001171_50001253_50002246_50002301_50016630_50016720_50025397
transcript_32539.known	chr12	+	3283	13	FSM	ENSG00000066117.15	ENST00000394963.9	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_4	41.9367082637634	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCTTGTAGTGTTTGT	50064656	True	NA	21	True	NA	NA	NA	50085341	50100707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50096849_50096973_50098713_50098816_50098946
transcript_32541.known	chr12	+	3237	12	FSM	ENSG00000066117.15	ENST00000381513.8	3237	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	114.054286045239	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGGTCCTCCTACCTAC	50064514	True	NA	13	True	AATAAA	-14	NA	50085199	50100642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50085547_50086160_50086349_50086620_50086664_50086755_50086879_50087362_50087486_50088520_50088638_50089883_50089986_50090240_50090403_50090492_50090591_50094436_50094573_50098713_50098816_50098946
transcript_32547.known	chr12	+	2887	8	FSM	ENSG00000167588.13	ENST00000301149.8	2887	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	2.24971653543195	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAAGAGTTGGGAGAGGG	50103993	True	NA	NA	False	AATAAA	-19	NA	50104007	50111313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50104092_50104573_50104752_50105547_50105689_50106287_50106427_50106804_50106918_50107566_50107801_50108023_50108131_50109422
transcript_32555.known	chr12	-	2132	11	FSM	ENSG00000139624.14	ENST00000547787.5	2132	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	173.862589420496	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTACTGTCTCAACCTC	-50161992	True	NA	-6	True	ATTAAA	-14	NA	50167303	50129798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50144768_50144970_50167100
transcript_32564.known	chr12	-	2507	10	FSM	ENSG00000139624.14	ENST00000317551.12	2507	10	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_9	58.2103465411815	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATGACTCATTACATGCT	-50162058	True	NA	NA	False	AATAAA	-13	NA	50167369	50129288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50130695_50134545_50134703_50135731_50135839_50135940_50136070_50137727_50137821_50138566_50138618_50142052_50142111_50143073_50143205_50143951_50144058_50167100
transcript_32576.known	chr12	+	708	3	FSM	ENSG00000178449.9	ENST00000317943.6	708	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	50112051	False	NA	13	True	ATTAAA	-13	NA	50112081	50120451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50112831_50112904_50120035
transcript_32577.known	chr12	+	677	2	FSM	ENSG00000178449.9	ENST00000548985.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	1120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGTCTTGGTGTTTTTT	50107252	True	NA	13	True	ATTAAA	-13	NA	50112236	50120451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112498_50120035
transcript_32578.known	chr12	+	698	2	FSM	ENSG00000272368.2	ENST00000548468.2	698	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAACACAAGATTTTGAAA	50107212	True	NA	NA	False	AATAAA	-21	NA	50112196	50165618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50165025
transcript_3258.nic	chr1	+	1307	9	NIC	ENSG00000117682.17	novel	3288	9	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_1	57.6319139019346	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGTGTTCCCTTTGCT	26428070	True	NA	12	True	NA	NA	NA	26432363	26469226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_26432519_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26457790_26457906_26460036_26460145_26468894
transcript_32580.known	chr12	+	484	2	FSM	ENSG00000178449.9	ENST00000550487.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_1	0	6967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTTGGTGTTTTTTGT	50107251	True	NA	15	True	ATTAAA	-15	NA	50112235	50120453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50112302_50120035
transcript_32581.known	chr12	-	522	4	FSM	ENSG00000139624.14	ENST00000546514.1	522	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	242.540718230981	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGATTGGAATGTCCGAAAA	-50162048	True	NA	NA	False	AAGAAA	-26	NA	50167359	50143164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50143205_50143951_50144058_50148471_50148589_50167100
transcript_32582.known	chr12	-	3669	11	FSM	ENSG00000050405.14	ENST00000394943.7	3669	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	68.5026276868267	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	-50282728	True	NA	-6	True	AATAAA	-21	NA	50283506	50175787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_32584.known	chr12	-	3612	8	FSM	ENSG00000050405.14	ENST00000552783.5	3612	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	54.5755421037516	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTCAATGTTTCTCTT	-50219187	True	NA	-8	True	AATAAA	-19	NA	50222705	50175789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192565_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020
transcript_32587.known	chr12	-	3706	11	FSM	ENSG00000050405.14	ENST00000341247.9	3680	11	-26	0	-26	0	multi-exon	FALSE	canonical	3	36	junction_10	60.5636854889132	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCAATGTTTCTCTTCC	-50282768	True	NA	-6	True	AATAAA	-21	NA	50283546	50175787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50178070_50181903_50182038_50192451_50192562_50195829_50195888_50200776_50200885_50204551_50204701_50205983_50206069_50222020_50222486_50231664_50231711_50248632_50248775_50283419
transcript_32606.known	chr12	+	1578	12	FSM	ENSG00000161813.23	ENST00000518561.5	1578	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	101.899642737758	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50390484	True	NA	NA	False	AATAAA	-17	NA	50400955	50461487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50412404_50412454_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_32627.known	chr12	+	435	1	FSM	ENSG00000244266.1	ENST00000498788.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTAATCTTATATACGA	NA	False	NA	NA	False	AATACA	-30	NA	50365651	50366086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50365700_50366100
transcript_32628.known	chr12	+	1577	11	FSM	ENSG00000161813.23	ENST00000522085.5	1577	11	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_1	54.0281408156897	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGTTGGTTGCTTTTTA	50390436	True	NA	NA	False	AATAAA	-17	NA	50400907	50461487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134
transcript_32629.known	chr12	+	2853	16	FSM	ENSG00000161813.23	ENST00000518444.5	2853	16	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	74.6599401732058	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGAGTAGATTTTTTTT	50390457	True	NA	22	True	AGTAAA	-22	NA	50400928	50476463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427764_50427910_50428934_50429091_50430494_50430571_50435487_50435625_50437734_50437839_50440438_50440550_50441589_50441644_50453459_50453673_50454313_50454418_50461134_50461348_50462581_50462631_50466958_50467121_50473414_50473537_50473998_50474168_50475525
transcript_32630.known	chr12	+	586	5	FSM	ENSG00000161813.23	ENST00000551886.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	146.007491246169	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAATTCTTGAAGTGTT	50390460	True	NA	37	True	AATAAA	-20	NA	50400931	50435599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50401029_50427761_50427910_50428934_50429091_50430497_50430571_50435487
transcript_32631.known	chr12	+	8705	38	FSM	ENSG00000066084.13	ENST00000301180.10	8705	38	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_13	7.84165796932102	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTTTAATCCTTCACAC	50498339	True	NA	10	True	AATAAA	-14	NA	50504984	50748657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50505241_50625975_50626048_50640723_50640853_50660193_50660320_50671185_50671399_50674473_50674630_50675328_50675449_50678678_50678877_50680671_50680764_50683137_50683249_50685832_50685957_50686572_50686683_50691048_50691152_50692948_50693014_50695266_50695361_50695847_50695968_50697060_50697176_50698327_50698468_50699065_50699203_50704139_50704221_50706537_50706666_50708447_50708563_50714394_50714597_50718708_50718819_50718954_50719036_50721272_50721397_50723201_50723324_50724774_50724887_50727702_50727813_50728547_50728679_50731368_50731538_50732365_50732537_50734134_50734197_50735072_50735131_50737035_50737111_50739408_50739587_50741415_50741540_50744586
transcript_32638.known	chr12	+	2412	7	FSM	ENSG00000123268.9	ENST00000262053.8	2412	7	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_3	9.20899318902754	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTCCTGGCCATGCTG	50762527	True	NA	44	True	AATATA	-23	NA	50764100	50821162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50764308_50780139_50780239_50795908_50796010_50809455_50809590_50814009_50814193_50814279_50814440_50819634
transcript_3264.known	chr1	+	1235	8	FSM	ENSG00000117682.17	ENST00000525682.6	1235	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	62.9940068415971	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGGGTTTGGAGAGCAAAG	26428045	True	NA	2	True	ACTAAA	-18	NA	26432338	26469373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26457790_26457906_26460036_26460145_26468894
transcript_32663.nnic	chr12	+	2196	3	NNC	ENSG00000185432.12	novel	3117	2	NA	NA	-404	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	68	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTATATCTTTGCTG	NA	False	NA	30	True	AATAAA	-26	NA	50924578	50932508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_50925537_50929913_50930221_50931577
transcript_32664.known	chr12	+	1825	3	FSM	ENSG00000185432.12	ENST00000547104.1	1825	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATGGTTTATATCTTTGCT	50924957	False	NA	29	True	AATAAA	-25	NA	50924982	50932507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50925537_50929913_50930292_50931614
transcript_32667.known	chr12	+	1846	3	FSM	ENSG00000185432.12	ENST00000550097.1	1846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTTGTAAAAGTACTAT	50924495	False	NA	7	True	AATAAA	-20	NA	50925040	50932438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_50925537_50929913_50930423_50931597
transcript_32671.known	chr12	-	2125	18	FSM	ENSG00000110911.17	ENST00000546636.5	2125	18	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	83.0405745658197	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTACTACATTTCAATAAAA	-51022634	True	NA	-37	True	ATTAAA	-29	NA	51026368	50979819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50980059_50981638_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_32672.known	chr12	-	3762	17	FSM	ENSG00000110911.17	ENST00000644495.1	3762	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	67.5233466569156	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATTGCCTATGTTCGTTT	-51022650	True	NA	-1	True	AATAAA	-18	NA	51026384	50979783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_32673.known	chr12	-	2486	17	FSM	ENSG00000110911.17	ENST00000547198.5	2486	17	0	0	0	0	multi-exon	FALSE	canonical	1	70	junction_1	68.088063381183	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGCCAAAGAGCTTTAATAT	-51022604	True	NA	-15	True	ATTAAA	-15	NA	51026338	50981008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50981804_50988381_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_32681.known	chr12	-	4132	16	FSM	ENSG00000110911.17	ENST00000262052.9	4132	16	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_8	57.0908048638307	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-51022650	True	NA	0	True	ATTAAA	-20	NA	51026384	50985991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026309
transcript_32682.nic	chr12	-	4139	16	ISM	ENSG00000110911.17	ENST00000547198.5	2486	17	-58	4983	-3	0	5prime_fragment	FALSE	canonical	1	86	junction_8	57.8594465541761	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCCTGGGTATTTT	-51022662	True	NA	0	True	ATTAAA	-20	NA	51026396	50985991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_50988436_50990794_50990949_50991598_50991673_50992189_50992340_50992809_50992930_50994543_50994631_50995628_50995788_50996816_50996973_50999173_50999242_50999344_50999416_51000312_51000420_51004787_51004908_51005310_51005437_51008475_51008625_51010694_51010767_51026314
transcript_32686.known	chr12	+	2106	9	FSM	ENSG00000050426.16	ENST00000262055.9	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	21.8714282798358	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATGCATACTCTAATCAT	51045118	True	NA	21	True	AGTAAA	-30	NA	51048326	51060424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32687.known	chr12	+	1389	9	FSM	ENSG00000050426.16	ENST00000550929.5	1389	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	28.4953395312286	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTACTTACATCTGTG	51045109	True	NA	NA	False	NA	NA	NA	51048317	51059805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048372_51049033_51049186_51052091_51052208_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_3269.known	chr1	+	868	7	FSM	ENSG00000117682.17	ENST00000427245.6	868	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	78.0101489123904	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGGTCCCTCTCATGTT	26428022	True	NA	-86	True	ATTAAA	-29	NA	26432315	26448565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730_26442874_26446315_26446433_26447558_26447661_26448355
transcript_32692.known	chr12	+	2001	8	FSM	ENSG00000050426.16	ENST00000547318.5	2001	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	27.2808522220107	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGATGGAAATGACTTAT	51045092	True	NA	6	True	AGTAAA	-15	NA	51048300	51060409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51053777_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32693.nic	chr12	+	1982	8	NIC	ENSG00000050426.16	novel	2123	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	26.3516254387714	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAATGACTTATGCAT	51045081	True	NA	10	True	AGTAAA	-19	NA	51048289	51060413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_51048479_51049033_51049186_51053811_51053861_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32710.known	chr12	+	1665	6	FSM	ENSG00000050426.16	ENST00000547008.5	1665	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	34.5056517109879	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTGTTTTTAAACCCA	51045132	True	NA	-34	True	NA	NA	NA	51048340	51060369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51052091_51052208_51056349_51056503_51058031_51058129_51059360
transcript_32715.known	chr12	+	601	6	FSM	ENSG00000050426.16	ENST00000547660.5	601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.8284214732826	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGGACAAGGCGCTGAA	51045118	True	NA	NA	False	NA	NA	NA	51048326	51059412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048372_51049033_51049186_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32718.known	chr12	+	1713	6	FSM	ENSG00000050426.16	ENST00000552739.5	1713	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	31.7704265001274	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAACCTGTTGATGGAAA	51045137	True	NA	-2	True	AGTAAA	-7	NA	51048345	51060401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51055834_51056022_51056143_51056246_51056349_51056503_51058031_51058129_51059360
transcript_32721.known	chr12	+	1566	5	FSM	ENSG00000050426.16	ENST00000380135.7	1566	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.2315048275574	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATGAAGCACTGTTTTTA	51045135	True	NA	-40	True	NA	NA	NA	51048343	51060363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058005_51058129_51059360
transcript_32722.known	chr12	+	1480	5	FSM	ENSG00000050426.16	ENST00000550100.5	1480	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	33.0340733183179	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGTTTAGCTTTTGTGTG	51045135	True	NA	NA	False	NA	NA	NA	51048343	51060303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51048479_51049033_51049186_51056349_51056503_51058031_51058129_51059360
transcript_32731.nic	chr12	+	1555	4	NIC	ENSG00000050426.16	novel	1566	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_3	30.9443945740671	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTTATGCATACTCTAAT	51045081	True	NA	18	True	AGTAAA	-27	NA	51048289	51060421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_51048479_51049033_51049186_51056349_51056503_51059360
transcript_32733.nnic	chr12	+	1349	4	NIC	ENSG00000050426.16	novel	850	6	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	42.7629122799964	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAAATGACTTATGCAT	51045117	True	NA	10	True	AGTAAA	-19	NA	51048325	51060413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_51048372_51056349_51056503_51058031_51058129_51059360
transcript_32734.nnic	chr12	+	763	3	NNC	ENSG00000050426.16	novel	578	3	NA	NA	-11	639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	37.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTATCATAATTATTACTA	51045081	True	NA	NA	False	AATAAA	-20	NA	51048289	51050069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_51048479_51049033_51049186_51049647
transcript_32741.known	chr12	-	898	1	FSM	ENSG00000278126.1	ENST00000620274.1	898	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGGTAAGCTTTCATCATT	NA	False	NA	-6	True	AATAAA	-21	NA	51202581	51201683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51201700_51202600
transcript_32745.known	chr12	+	587	4	FSM	ENSG00000183283.16	ENST00000551313.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	1	63	junction_1	149.046599722667	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACAATGTAACTGCTTTA	51239222	True	NA	NA	False	NA	NA	NA	51239294	51242510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51239336_51240342_51240462_51240870_51241117_51242329
transcript_32748.known	chr12	-	610	4	FSM	ENSG00000170545.17	ENST00000605426.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGTGATCTTGATCTTCTT	-51269938	False	556	NA	False	NA	NA	NA	51269958	51246084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51269536
transcript_32749.known	chr12	-	1875	4	FSM	ENSG00000170545.17	ENST00000603798.6	1875	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	33.5592345297419	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATTGCCTCTGTTGTCCA	-51269859	True	NA	NA	False	ATTAAA	-25	NA	51270415	51244557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_51246120_51246750_51246832_51269244_51269317_51270255
transcript_32750.known	chr12	+	485	3	FSM	ENSG00000183283.16	ENST00000551919.5	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	152	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGCCGGGAAAGACATCA	51234826	True	NA	NA	False	NA	NA	NA	51238826	51242474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240870_51241117_51242329
transcript_32751.nnic	chr12	+	732	2	Antisense	novelGene_ENSG00000170545.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAATA	51247649	False	NA	NA	False	NA	NA	NA	51247681	51248913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_51247979_51248478
transcript_32754.known	chr12	+	1811	4	FSM	ENSG00000183283.16	ENST00000436900.2	1811	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.592106351271	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACTGCAAGGATTCTTT	51234902	False	NA	NA	False	AATAAA	-44	NA	51238902	51243785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240898_51241117_51242329
transcript_32755.known	chr12	+	2064	4	FSM	ENSG00000183283.16	ENST00000412716.8	2064	4	0	0	0	0	multi-exon	FALSE	canonical	2	251	junction_1	71.0226880807973	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTTGATCATTTCATGAAT	51234825	True	NA	11	True	AATAAA	-20	NA	51238825	51243933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51242329
transcript_32756.known	chr12	+	598	2	FSM	ENSG00000183283.16	ENST00000549041.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	2	251	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCCTCTTCTAGCTCTAT	51234836	True	NA	NA	False	CATAAA	-20	NA	51238836	51240856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342
transcript_32757.known	chr12	+	1045	4	FSM	ENSG00000183283.16	ENST00000604900.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	171.204231515722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTGGAACCCTTGTGA	51234885	True	NA	18	True	AATAAA	-31	NA	51238885	51271362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51238921_51240342_51240462_51240870_51241117_51270717
transcript_32759.known	chr12	+	2262	15	FSM	ENSG00000050438.17	ENST00000535225.6	2262	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	18.1913020256318	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCTTACTCACTTTCTTT	51391298	False	NA	1	True	AATAAA	-15	NA	51391316	51474575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51391489_51440707_51440790_51450875_51451023_51452123_51452260_51453538_51453700_51457350_51457540_51458558_51458651_51459950_51460109_51461203_51461292_51462309_51462457_51463613_51463715_51469613_51469789_51470391_51470526_51471286_51471533_51474341
transcript_32779.known	chr12	+	1507	6	FSM	ENSG00000167612.13	ENST00000340970.8	1507	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.00665927567458	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGTATATGGCATATTAT	51888151	False	NA	NA	False	AGTAAA	-19	NA	51888216	51891657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51888332_51888567_51888819_51889070_51889197_51889371_51889513_51890583_51890986_51891185
transcript_32782.known	chr12	+	4531	9	FSM	ENSG00000135503.13	ENST00000257963.9	4531	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	5.78656849955135	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTCTGGTGCCATCTGT	51949494	True	NA	6	True	ATTAAA	-16	NA	51951698	51997078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_51951835_51975264_51975505_51976326_51976576_51980968_51981200_51983998_51984167_51985191_51985349_51986817_51986943_51991862_51991994_51993984
transcript_32784.known	chr12	+	2485	7	FSM	ENSG00000123358.20	ENST00000394825.6	2485	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	36.83936602181	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGATTCAGTCTGTCTCT	52051175	True	NA	15	True	AATAAA	-21	NA	52051441	52059503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52051569_52054326_52055205_52056029_52056160_52056493_52056646_52057056_52057260_52057351_52057531_52058687
transcript_32791.known	chr12	+	1433	4	FSM	ENSG00000123395.15	ENST00000336854.9	1433	4	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_1	58.1262992686328	2474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATCTCTCCCTTGTCTTG	52064995	True	NA	16	True	AATAAA	-25	NA	52069977	52077495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52070243_52070353_52070484_52073574_52073903_52076785
transcript_32794.known	chr12	+	846	4	FSM	ENSG00000123395.15	ENST00000553049.5	846	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	181.846699783698	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTCCTTCCAGATCACT	52065020	True	NA	NA	False	NA	NA	NA	52070002	52077104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52070072_52070353_52070484_52073574_52073903_52076785
transcript_32796.known	chr12	+	658	4	FSM	ENSG00000123395.15	ENST00000548915.1	658	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.424608550826	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGGTGGGTGAGAAACT	52065037	True	NA	NA	False	NA	NA	NA	52070019	52076956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52070049_52070353_52070484_52073574_52073903_52076785
transcript_32806.known	chr12	-	1929	9	FSM	ENSG00000205426.11	ENST00000327741.9	1929	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGTCTTGTGTGTGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	52291534	52285912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52286494_52286790_52286823_52287101_52287323_52287595_52287722_52287983_52288149_52288360_52288457_52289214_52289276_52290077_52290287_52291096
transcript_32815.known	chr12	-	1755	9	FSM	ENSG00000170421.13	ENST00000546897.5	1755	9	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_8	983.832271019812	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACCCCCCTTGCCCATGC	-52948548	True	NA	-98	True	NA	NA	NA	52949824	52897280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949714
transcript_32839.known	chr12	-	507	3	FSM	ENSG00000170421.13	ENST00000551318.1	507	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	24.5	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGATGGTGCACGCCTGT	-52948644	True	NA	-12	True	AATACA	-14	NA	52949920	52948650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52948829_52949455_52949579_52949714
transcript_32840.known	chr12	-	2437	3	FSM	ENSG00000170421.13	ENST00000619952.2	2437	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	10	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACGTACTGCCTTTTACT	-52948598	True	NA	NA	False	AATAAA	-18	NA	52949874	52946613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52948829_52949455_52949518_52949714
transcript_32841.known	chr12	+	1413	7	FSM	ENSG00000111057.11	ENST00000388835.4	1413	7	0	0	0	0	multi-exon	FALSE	canonical	1	2195	junction_3	1957.13334156533	9255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCACTTTGTCTTCTTTTG	52895917	True	NA	23	True	AATAAA	-20	NA	52949117	52952906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_32842.known	chr12	-	2126	9	FSM	ENSG00000170421.13	ENST00000552551.5	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_8	966.717092793957	3517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTTGTGTGTGCATCTG	-52948566	True	NA	-4	True	AATAAA	-25	NA	52949842	52897186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52900684_52901158_52901220_52901863_52902073_52904657_52905028_52949455
transcript_32843.known	chr12	+	1420	8	FSM	ENSG00000111057.11	ENST00000388837.6	1420	8	0	0	0	0	multi-exon	FALSE	canonical	1	708	junction_1	2707.31093334251	3321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGATGTCACTTTGTCTT	52948718	False	NA	17	True	AATAAA	-14	NA	52948870	52952900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_52948939_52949172_52949591_52950327_52950411_52950749_52950907_52951480_52951646_52951730_52951857_52952118_52952343_52952721
transcript_32844.known	chr12	-	2202	7	FSM	ENSG00000170421.13	ENST00000550170.5	2202	7	0	0	0	0	multi-exon	FALSE	canonical	3	2856	junction_5	102.243853387651	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAACCTCAGCTAGCTCT	-52887808	True	NA	-33	True	AAAACA	-30	NA	52905044	52897215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_52897619_52898460_52898520_52898678_52898900_52899774_52900066_52900587_52901220_52901863_52902073_52904657
transcript_32848.known	chr12	-	2902	11	FSM	ENSG00000167778.9	ENST00000301463.9	2902	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_8	6.84178339323893	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATGTGATCCTACTCTGA	-53078597	True	NA	0	True	AATAGA	-18	NA	53079390	53064315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53065967_53066313_53066487_53066572_53066693_53067647_53067706_53068154_53068305_53073285_53073472_53074648_53074785_53075094_53075220_53075735_53075812_53077114_53077262_53079310
transcript_3285.nic	chr1	+	626	4	ISM	ENSG00000117682.17	ENST00000374185.7	1148	6	-42	5132	-16	-36	5prime_fragment	FALSE	canonical	3	131	junction_1	46.9207369459982	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTAACTTTTTAATAAAA	26432281	False	NA	NA	False	AATACA	-21	NA	26432299	26443044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442730
transcript_32860.known	chr12	-	1645	5	FSM	ENSG00000257337.8	ENST00000657514.2	1750	5	92	13	31	0	multi-exon	FALSE	canonical	2	3	junction_1	8.13557004763649	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	-53053947	False	NA	-28	True	AAAAAG	-44	NA	53054353	53038985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53053395_53053575_53054320
transcript_32863.known	chr12	-	1671	4	FSM	ENSG00000257337.8	ENST00000546566.7	1675	4	0	4	0	0	multi-exon	FALSE	canonical	2	2	junction_3	10.1434160364686	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACCTTGGTTAATTTCCT	-53046665	False	NA	-9	True	AATAAA	-18	NA	53047071	53038966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53046852
transcript_32864.known	chr12	-	1563	4	FSM	ENSG00000257337.8	ENST00000662901.2	1591	4	0	28	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6770782520313	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATTATGACGCTCTGTAG	-53054044	True	NA	-28	True	AAAAAG	-44	NA	53054450	53038985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045599_53045654_53045960_53046062_53054320
transcript_32865.known	chr12	-	2863	4	FSM	ENSG00000257337.8	ENST00000546793.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	2.05480466765633	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTATTTTTATGTTCC	-53054032	True	NA	NA	False	CATAAA	-16	NA	53054438	53043188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53045654_53045960_53046062_53053395_53053575_53054320
transcript_32866.known	chr12	-	1568	3	FSM	ENSG00000257337.8	ENST00000684981.1	1635	3	34	33	13	2	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGAAATAAAGATTATGAC	-53046644	False	NA	-37	True	AAAAAG	-35	NA	53047050	53038994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53040264_53045960_53046062_53046852
transcript_32868.known	chr12	-	569	2	FSM	ENSG00000257337.8	ENST00000551890.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTTCACCGGGAGACCC	-53054012	True	NA	NA	False	NA	NA	NA	53054418	53053103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53053575_53054320
transcript_32871.known	chr12	+	1936	15	FSM	ENSG00000063046.18	ENST00000420463.7	1936	15	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	401.663454414569	3507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCAAAACCTCTATCCAG	52977002	True	NA	-82	True	NA	NA	NA	53006455	53040280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53006497_53016472_53016611_53018797_53019007_53019909_53020027_53021805_53021861_53022492_53022628_53027781_53027920_53028014_53028189_53033805_53034035_53034611_53034725_53037408_53037623_53038355_53038412_53039237_53039344_53039629_53039703_53040142
transcript_32875.known	chr12	+	947	4	FSM	ENSG00000167779.9	ENST00000301464.4	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	17.9691092959247	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53097138	True	NA	10	True	AATAAA	-16	NA	53097666	53102340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53098052_53100711_53100858_53101040_53101161_53102044
transcript_32876.nnic	chr12	+	802	4	NNC	ENSG00000167779.9	novel	1177	4	NA	NA	415	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	33.4099120355355	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTGTGTCTCTGTGT	53097553	False	NA	10	True	AATAAA	-16	NA	53098081	53102340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53098322_53100711_53100858_53101040_53101161_53102044
transcript_32879.nic	chr12	-	374	2	ISM	ENSG00000139631.20	ENST00000267085.8	2645	17	-50	22056	0	-6450	5prime_fragment	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGTATGATGAAAAAAA	-53180418	True	NA	NA	False	AAGAAA	-5	NA	53180646	53179718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_53180013_53180566
transcript_3288.known	chr1	+	717	3	FSM	ENSG00000117682.17	ENST00000487944.5	717	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	49	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATGACATTAACAAAGAAGT	26428051	True	NA	NA	False	AAGAAA	-6	NA	26432344	26438734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167
transcript_32880.nic	chr12	-	353	2	ISM	ENSG00000139631.20	ENST00000453446.6	1774	16	-14	21209	-14	-6451	5prime_fragment	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGTATGATGAAAAAA	-53180432	True	NA	NA	False	AAGAAA	-4	NA	53180660	53179719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_53180013_53180600
transcript_32881.known	chr12	-	2917	10	FSM	ENSG00000172819.17	ENST00000425354.7	2917	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	118.37677867046	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53231824	True	NA	-3	True	AATAAA	-15	NA	53232209	53210568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53227361_53227688_53231168_53231236_53231973
transcript_32883.known	chr12	-	1836	8	FSM	ENSG00000172819.17	ENST00000338561.9	1836	8	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_7	58.8325191209968	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTGGCTCTCTGAGAG	-53220125	False	331	NA	False	NA	NA	NA	53220259	53211330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53211864_53213084_53213244_53213495_53213701_53214058_53214236_53214445_53214607_53215292_53215435_53215645_53215795_53219949
transcript_32888.nnic	chr12	-	2029	4	NIC	ENSG00000172819.17	novel	2917	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	14	junction_2	143.204593346567	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATGTGGCTCCCTTTAG	-53214709	False	417	-3	True	AATAAA	-15	NA	53214843	53210568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_53211864_53213084_53213244_53214058_53214236_53214445
transcript_32889.known	chr12	+	1763	2	FSM	ENSG00000182544.9	ENST00000329548.5	1763	2	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	546	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTGATTTACTCATCC	53249830	True	NA	21	True	AATAAA	-17	NA	53252094	53254406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53252269_53252817
transcript_32893.known	chr12	+	1202	7	FSM	ENSG00000139637.14	ENST00000267103.10	1202	7	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	22.2311093340441	1969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	53294049	True	NA	19	True	AATAAA	-20	NA	53299694	53307177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32900.known	chr12	+	988	6	FSM	ENSG00000139637.14	ENST00000548632.5	988	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_3	172.518288885556	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53294104	True	NA	13	True	AATAAA	-14	NA	53299749	53307171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53299954_53300149_53300263_53303033_53303194_53306197_53306321_53306679_53306862_53306965
transcript_32901.known	chr12	+	1848	10	FSM	ENSG00000288663.1	ENST00000676527.1	1848	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1409.85434848803	509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53295471	False	NA	13	True	AATAAA	-14	NA	53295491	53307171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296218_53296276_53297849_53297925_53298044_53298151_53299268_53299954_53300149_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32903.known	chr12	+	595	5	FSM	ENSG00000123349.15	ENST00000550880.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1606.33766297749	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAATGTTGGTCTTTTCTT	53274170	True	NA	24	True	AATAAA	-14	NA	53295524	53299445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296429_53296552_53297849_53297925_53298044_53298151_53299268
transcript_32907.known	chr12	+	528	5	FSM	ENSG00000123349.15	ENST00000628881.2	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1406.06089839665	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53274154	True	NA	31	True	AATAAA	-21	NA	53295508	53299452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296243_53296276_53297849_53297925_53298044_53298151_53299268
transcript_32909.known	chr12	+	559	5	FSM	ENSG00000123349.15	ENST00000547130.6	559	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	1606.84852661973	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53296453_53296552_53297849_53297925_53298044_53298151_53299268
transcript_3291.known	chr1	+	656	4	FSM	ENSG00000117682.17	ENST00000374186.7	656	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	92.9599674889979	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGATATTGAGGGGTGTCA	26428035	True	NA	NA	False	AATAAA	-18	NA	26432328	26443080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26432377_26432890_26433009_26438167_26438285_26442707
transcript_32913.known	chr12	+	840	5	FSM	ENSG00000139637.14	ENST00000549488.5	840	5	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	190.589873812855	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCCTTGACTTATTCT	53299935	False	NA	19	True	AATAAA	-20	NA	53300092	53307177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53300263_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32915.known	chr12	+	478	4	FSM	ENSG00000123349.15	ENST00000351500.7	478	4	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	1306.6769557418	4020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274170	True	NA	29	True	AATAAA	-19	NA	53295524	53299450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53297849_53297925_53298044_53298151_53299268
transcript_32921.known	chr12	+	392	3	FSM	ENSG00000123349.15	ENST00000550846.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1583	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274181	True	NA	29	True	AATAAA	-19	NA	53295535	53299450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53298044_53298151_53299268
transcript_32922.known	chr12	-	647	2	FSM	ENSG00000257605.3	ENST00000550263.3	697	2	50	0	50	0	multi-exon	FALSE	canonical	2	7	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATGATGGGGAAAGATTTT	-53300302	False	NA	NA	False	ATTAAA	-23	NA	53300314	53298654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53299130_53300142
transcript_32923.known	chr12	+	631	3	FSM	ENSG00000123349.15	ENST00000677326.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	489	junction_1	1360	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53295471	False	NA	29	True	AATAAA	-19	NA	53295491	53299450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53297849_53298151_53299268
transcript_32924.known	chr12	+	946	5	FSM	ENSG00000123349.15	ENST00000550069.2	946	5	0	0	0	0	multi-exon	TRUE	canonical	2	126	junction_3	1319.18402810222	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCAGAATGTTGGTCT	NA	False	NA	18	True	AATAAA	-8	NA	53295478	53299439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53296276_53297849_53297925_53298048_53298151_53299268
transcript_32925.known	chr12	+	564	5	FSM	ENSG00000123349.15	ENST00000243040.10	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1358.27666548461	985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGTCTTTTCTTGGATT	53274187	True	NA	29	True	AATAAA	-19	NA	53295541	53299450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53297849_53297925_53298044_53298151_53299268
transcript_32926.known	chr12	+	635	6	FSM	ENSG00000123349.15	ENST00000549759.2	635	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1541.46807946191	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGTTGGTCTTTTCTTGG	53274151	True	NA	26	True	AATAAA	-16	NA	53295505	53299447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53296429_53296468_53297849_53297925_53298044_53298151_53299268
transcript_32927.known	chr12	+	640	6	FSM	ENSG00000123349.15	ENST00000676468.1	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1280.64193278215	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTCTTTTCTTGGATTAA	53274170	True	NA	31	True	AATAAA	-21	NA	53295524	53299452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53295640_53295838_53295942_53296218_53296276_53297849_53297925_53298044_53298151_53299268
transcript_32928.known	chr12	+	1369	6	FSM	ENSG00000139637.14	ENST00000548845.5	1369	6	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	24.1545026858348	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACCCAGTCCTTGACT	53294072	True	NA	13	True	AATAAA	-14	NA	53299717	53307171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53300263_53303033_53303194_53305907_53306061_53306197_53306321_53306679_53306862_53306965
transcript_32934.known	chr12	-	1606	16	FSM	ENSG00000094914.14	ENST00000549450.6	1606	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	117.361814725044	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTACCAGTCTGTCTTTT	-53321246	False	321	-5	True	AATAAA	-25	NA	53321257	53307457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321200
transcript_32935.known	chr12	-	1815	16	FSM	ENSG00000094914.14	ENST00000209873.9	1815	16	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_15	54.8826627148015	1113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316768	True	NA	-7	True	AATAAA	-23	NA	53321610	53307459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_32937.nic	chr12	-	1709	16	NIC	ENSG00000094914.14	novel	1815	16	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_15	117.361814725044	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTACCAGTCTGTCTT	-53316790	True	NA	-7	True	AATAAA	-23	NA	53321632	53307459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53314750_53314850_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321470
transcript_32952.known	chr12	-	1703	15	FSM	ENSG00000094914.14	ENST00000394384.7	1703	15	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	118.364212220983	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTACCAGTCTGTCTTT	-53316754	True	NA	-6	True	AATAAA	-24	NA	53321596	53307458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53307714_53307844_53307930_53308051_53308134_53308281_53308350_53308434_53308529_53308724_53308816_53308959_53309021_53309156_53309282_53309600_53309722_53314297_53314442_53315093_53315141_53315334_53315427_53315726_53315783_53320564_53320693_53321342
transcript_32970.known	chr12	+	7680	6	FSM	ENSG00000185591.10	ENST00000327443.9	7680	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	34.1443992479001	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTCTCTGGTGTATTGA	53379694	True	NA	NA	False	AATAAA	-4	NA	53380175	53416446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53380299_53381658_53381814_53382109_53383623_53406584_53406754_53409361_53409562_53410926
transcript_32977.known	chr12	-	4261	14	FSM	ENSG00000139625.13	ENST00000547488.6	4261	14	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_13	18.8174035019769	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAGAAGCTTATAAAACTA	-53498721	True	NA	NA	False	NA	NA	NA	53499458	53479668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53481281_53481940_53482212_53482298_53482370_53482564_53483190_53483348_53483487_53483606_53483724_53483910_53484021_53484256_53484366_53485055_53485215_53485316_53485476_53486055_53486248_53486438_53486623_53486946_53487429_53499426
transcript_32983.known	chr12	+	688	4	FSM	ENSG00000205352.11	ENST00000547368.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	1	56	junction_1	988.217362504604	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGAGGATTGCCATGG	53433792	True	NA	NA	False	NA	NA	NA	53441755	53446218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441818_53442694_53442734_53443390_53443774_53446014
transcript_32989.known	chr12	+	1105	4	FSM	ENSG00000205352.11	ENST00000429243.7	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	1530	junction_1	295.398412694148	10157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433770	True	NA	27	True	AATAAA	-20	NA	53441733	53446638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443390_53443774_53446014
transcript_32990.known	chr12	+	810	4	FSM	ENSG00000205352.11	ENST00000546581.5	810	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	864.411296136792	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTATCACCTTGGCTGG	53433784	True	NA	34	True	AATAAA	-27	NA	53441747	53446645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443678_53443774_53446014
transcript_32991.known	chr12	+	1009	4	FSM	ENSG00000205352.11	ENST00000551003.5	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	866.227452809018	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTCACCTGTGCTATCAC	53433768	True	NA	25	True	AATAAA	-18	NA	53441731	53446636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443486_53443774_53446014
transcript_32992.known	chr12	+	927	4	FSM	ENSG00000205352.11	ENST00000379786.8	927	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	857.603378931984	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCTGTGCTATCACCT	53433798	True	NA	27	True	AATAAA	-20	NA	53441761	53446638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443540_53443774_53446014
transcript_32993.known	chr12	+	755	4	FSM	ENSG00000205352.11	ENST00000549068.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	876.22156000764	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCAGGCCTTTTGTTG	53433781	True	NA	-49	True	AATACA	-3	NA	53441744	53446475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53441793_53442694_53442734_53443566_53443774_53446014
transcript_32994.known	chr12	+	1814	15	FSM	ENSG00000197111.16	ENST00000359462.9	1814	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	255.582577813185	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATGTGGGTTTTATTCC	53452114	False	NA	50	True	AATAGA	-18	NA	53452128	53479832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_32995.known	chr12	+	1342	15	FSM	ENSG00000197111.16	ENST00000552296.6	1342	15	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	233.654954484389	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTTCAGCTGTTGATG	53446962	True	NA	32	True	ATTAAA	-16	NA	53452367	53479614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53452377_53454725_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_32996.known	chr12	+	1418	12	FSM	ENSG00000197111.16	ENST00000552819.5	1418	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	266.608450945769	2354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGATTCATGTGGGT	53454472	True	NA	42	True	ATTAAA	-42	NA	53454733	53479824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_32997.known	chr12	+	1202	13	FSM	ENSG00000197111.16	ENST00000548933.5	1202	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	260.182668203194	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGCTGTTGATGCTGAGA	53454523	True	NA	38	True	ATTAAA	-22	NA	53454784	53479620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_32998.known	chr12	+	1296	14	FSM	ENSG00000197111.16	ENST00000439930.7	1296	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_6	266.098349038371	702	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGCTGTTGATGCTGA	53454517	True	NA	36	True	ATTAAA	-20	NA	53454778	53479618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53454870_53455346_53455371_53455460_53455494_53455884_53456002_53459271_53459404_53461014_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468779_53468833_53471637_53471808_53479405
transcript_32999.known	chr12	+	1919	8	FSM	ENSG00000197111.16	ENST00000547859.2	1919	8	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_5	223.361151684067	1542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCTAAGTGGTTTTCTCTC	53460737	True	NA	16	True	AGTAAA	-17	NA	53461135	53480807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53461144_53462492_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53468776_53468833_53471637_53471808_53479405
transcript_33.known	ERCC-00074	+	506	1	FSM	ERCC-00074A	DQ516754	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	341641	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00074_+_0_500
transcript_33000.known	chr12	+	2543	11	FSM	ENSG00000197111.16	ENST00000550585.5	2543	11	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	316.057732068051	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGTCTTGCTGTTATT	53455732	True	NA	-65	True	AATAGA	-36	NA	53455939	53479850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53456002_53459271_53459404_53459799_53461144_53462480_53462568_53464759_53464853_53465931_53465974_53467220_53467294_53467804_53467844_53468776_53468833_53471637_53471808_53479405
transcript_33007.nic	chr12	+	1601	9	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_5	134.951843262699	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493777	True	NA	27	True	AATAAA	-24	NA	53501277	53506431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33010.known	chr12	+	1510	9	FSM	ENSG00000139546.11	ENST00000266987.7	1510	9	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_3	50.9386886364382	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53493782	True	NA	27	True	AATAAA	-24	NA	53501282	53506431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33018.known	chr12	+	1514	9	FSM	ENSG00000139546.11	ENST00000549572.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_5	156.83903970313	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTAAGCCCTTCTCTTC	53501018	True	NA	19	True	AATAAA	-16	NA	53501603	53506423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504611_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33020.known	chr12	+	1402	9	FSM	ENSG00000139546.11	ENST00000394357.6	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	112.281384810662	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTTTGTGGATTTTTAAG	53501033	False	NA	8	True	AATAAA	-5	NA	53501618	53506412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33021.known	chr12	+	1466	9	FSM	ENSG00000139546.11	ENST00000549679.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	165.152959404305	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTGGAATAAATATGCTGC	53501019	True	NA	-8	True	AATGAA	-22	NA	53501604	53506396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501709_53502014_53502185_53503026_53503213_53503729_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33028.nic	chr12	+	1454	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	60	junction_6	136.935706647689	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53501191	True	NA	27	True	AATAAA	-24	NA	53501210	53506431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501462_53502014_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_33040.nic	chr12	+	1453	8	NIC	ENSG00000139546.11	novel	1510	9	NA	NA	-104	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_1	137.262447857514	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTCTCTTCTGTTTCCT	53501157	True	NA	27	True	AATAAA	-24	NA	53501169	53506431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_53501462_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33072.known	chr12	+	916	6	FSM	ENSG00000139546.11	ENST00000552857.5	916	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	209.366664013161	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCCTCTGTGGGTGCCATC	53501254	False	NA	NA	False	NA	NA	NA	53501273	53506229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501462_53503712_53503809_53504396_53504470_53504697_53504816_53505648_53505851_53505990
transcript_33084.known	chr12	-	775	1	FSM	ENSG00000270175.1	ENST00000602306.1	775	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCTGAGAAGGGGTCAAG	-53500914	False	NA	-9	True	ATTAAA	-22	NA	53500936	53500161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53500200_53500900
transcript_33085.known	chr12	+	1368	9	FSM	ENSG00000139546.11	ENST00000456234.6	1368	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	149.688843939687	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAAGCCCTTCTCTTCT	53500915	False	NA	20	True	AATAAA	-17	NA	53500952	53506424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_53501002_53502019_53502185_53503026_53503130_53503712_53503809_53504396_53504470_53504697_53504816_53505134_53505263_53505648_53505851_53505990
transcript_33088.known	chr12	-	440	3	FSM	ENSG00000139574.9	ENST00000267017.4	440	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGTCTGTGTGAG	-53507462	True	NA	-2	True	AATAAA	-18	NA	53507484	53506687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53506894_53507020_53507143_53507372
transcript_33089.known	chr12	-	5218	12	FSM	ENSG00000170653.19	ENST00000456903.8	5218	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_8	44.2194004018692	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGACTCCCTCCACCCC	-53625983	False	2630	NA	False	NA	NA	NA	53626000	53513441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53625950
transcript_33090.known	chr12	-	6660	12	FSM	ENSG00000170653.19	ENST00000420353.7	6660	12	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_8	47.4101150416708	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATGTCTGATGCTTCACT	-53623752	True	NA	0	True	ATTAAA	-18	NA	53626382	53512053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53517355_53523275_53523385_53524563_53524762_53531743_53531897_53532509_53532624_53533159_53533260_53534501_53534660_53537414_53537553_53543329_53543449_53552540_53552638_53600952_53601022_53626278
transcript_33094.known	chr12	-	774	4	FSM	ENSG00000170653.19	ENST00000548118.6	774	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	64.3583716388164	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53625979	False	2630	-2	True	AATAAA	-21	NA	53625996	53542886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53625950
transcript_33095.known	chr12	-	860	4	FSM	ENSG00000170653.19	ENST00000591397.1	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	1.69967317119759	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGTTTCAATATATGT	-53623780	True	NA	-2	True	AATAAA	-21	NA	53626410	53542886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53543449_53552540_53552638_53600952_53601022_53626278
transcript_3311.known	chr1	+	1148	7	FSM	ENSG00000198830.11	ENST00000619352.4	1148	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	3867.6033779188	15512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTGCCTCTGATCTTTT	26371367	True	NA	NA	False	AATAAA	-22	NA	26472514	26475970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472563_26472607_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_3312.known	chr1	+	1940	6	FSM	ENSG00000198830.11	ENST00000361427.6	1940	6	0	0	0	0	multi-exon	FALSE	canonical	3	9773	junction_2	355.842886678939	15793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTTGTCCATTCCCTTA	26371292	True	NA	6	True	AATAAA	-17	NA	26472439	26476642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473482_26473528_26473702_26473733_26474084_26474136_26474571_26474668_26475112
transcript_33120.known	chr12	-	1792	5	FSM	ENSG00000135390.21	ENST00000338662.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	2545.82465765025	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAAGACAAATAAATACT	-53676766	True	NA	1	True	NA	NA	NA	53677398	53665201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676175
transcript_3313.known	chr1	+	320	4	FSM	ENSG00000198830.11	ENST00000468388.5	320	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4744.61990047675	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGGTAAGTGCTAACA	26371302	True	NA	NA	False	AAAAAG	-45	NA	26472449	26474128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473459_26473528_26473702_26473733_26474084
transcript_33134.known	chr12	-	632	5	FSM	ENSG00000135390.21	ENST00000394349.9	632	5	0	0	0	0	multi-exon	FALSE	canonical	3	4034	junction_4	804.124368490347	76254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTCTTGAGTCTCCTGTG	-53590281	True	NA	-9	True	AATAAA	-17	NA	53676083	53665169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53676052
transcript_33135.known	chr12	-	728	5	FSM	ENSG00000135390.21	ENST00000549748.2	728	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	2393.72909912546	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCCTGGGGAACGTGGTT	-53590280	True	NA	-36	True	NA	NA	NA	53676082	53665238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53670115_53672575_53672646_53676052
transcript_33136.known	chr12	-	1950	6	FSM	ENSG00000135390.21	ENST00000552242.5	1950	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2885.59983365677	3190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTCTTGAGTCTCCTGT	-53676776	True	NA	-10	True	AATAAA	-16	NA	53677408	53665170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53665429_53669147_53669342_53669870_53669949_53672575_53672646_53673695_53673813_53676175
transcript_33137.known	chr12	-	5576	15	FSM	ENSG00000012822.16	ENST00000550804.6	5576	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	12.6491106406735	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGCCATGTGTTGCTT	-53726492	True	NA	NA	False	AATAAA	-20	NA	53727452	53708516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_53712122_53713099_53713207_53713700_53713901_53714132_53714242_53714597_53714694_53715199_53715326_53715792_53716048_53716259_53716416_53719738_53719830_53721466_53721616_53722024_53722184_53723592_53723784_53724644_53724748_53725086_53725267_53727403
transcript_3314.known	chr1	+	1045	5	FSM	ENSG00000198830.11	ENST00000460563.5	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	9773	junction_2	397.837513942564	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACATGGCCACCTTGGCA	26371329	True	NA	NA	False	NA	NA	NA	26472476	26475432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473482_26473528_26473702_26474136_26474571_26474668_26475112
transcript_33145.nnic	chr12	+	605	5	NNC	ENSG00000286069.2	novel	2421	5	NA	NA	5260	-9499	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_1	2.27760839478607	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATTTATTCCAGTATTTG	53755820	True	NA	NA	False	AATAAA	-19	NA	53756107	53888396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53756244_53848858_53848957_53850309_53850413_53875154_53875249_53888222
transcript_3315.known	chr1	+	1030	4	FSM	ENSG00000198830.11	ENST00000479815.5	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	10167	junction_1	258.868048755861	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGAATTTTGTTTTACTT	26371315	True	NA	NA	False	TATAAA	-3	NA	26472462	26475228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26472628_26473482_26474136_26474571_26474668_26475112
transcript_33155.nnic	chr12	-	619	3	NNC	ENSG00000260492.3	novel	1390	3	NA	NA	-41	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACAGCATCTCAAATCC	-53756077	False	NA	-4	True	AATAAA	-22	NA	53756089	53746339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_53746548_53746707_53746849_53755819
transcript_33157.nnic	chr12	-	553	3	NNC	ENSG00000260492.3	novel	1566	3	NA	NA	17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACAGCATCTCAAATCC	-53757005	False	NA	-4	True	AATAAA	-22	NA	53757017	53746339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_53746548_53746707_53746849_53756813
transcript_33158.nnic	chr12	+	411	2	NNC	ENSG00000260030.1	novel	429	2	NA	NA	1761	9	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCAGTGGTGGGAATTAC	53755831	True	NA	NA	False	AATAAA	-30	NA	53756118	53762113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53756244_53761827
transcript_33159.nnic	chr12	+	810	2	NNC	ENSG00000260030.1	novel	429	2	NA	NA	1521	168	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTCCATTCTCTCTCTTG	NA	False	NA	NA	False	AATAAA	-14	NA	53755878	53762272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_53756244_53761827
transcript_33160.nnic	chr12	-	641	2	NIC	ENSG00000260492.3	novel	1566	3	NA	NA	91	-1	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACAGCATCTCAAATCCCT	-53756931	False	NA	-2	True	AATAAA	-24	NA	53756943	53746337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_53746849_53756813
transcript_33161.nnic	chr12	-	776	2	NIC	ENSG00000260492.3	novel	1390	3	NA	NA	-41	3	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	0	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCAGACAGCATCTCAAA	-53756077	False	NA	-7	True	AATAAA	-19	NA	53756089	53746342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_53746849_53755819
transcript_33174.known	chr12	-	2119	6	FSM	ENSG00000123415.16	ENST00000513838.5	2119	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	88.6476170012483	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGACTCTAAATCCTT	-54187243	True	NA	-1	True	AATAAA	-29	NA	54188957	54180357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188510_54188597_54188725
transcript_33185.known	chr12	-	484	5	FSM	ENSG00000123415.16	ENST00000635234.1	484	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTACTGTGTTTTGGGGCC	-54187269	True	NA	1	True	AATAAA	-16	NA	54188983	54121276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54121456_54165373_54165479_54172024_54172110_54188514_54188597_54188950
transcript_33191.known	chr12	-	926	5	FSM	ENSG00000123415.16	ENST00000514685.5	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	85.9051075315083	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187226	True	NA	-16	True	AATAAA	-34	NA	54188940	54181452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188720
transcript_33192.nnic	chr12	-	833	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_4	85.1656474172539	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187238	True	NA	-16	True	AATAAA	-34	NA	54188952	54181452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188825
transcript_33193.nnic	chr12	-	797	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_4	84.4285940899172	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187243	True	NA	-16	True	AATAAA	-34	NA	54188957	54181452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188866
transcript_33195.nic	chr12	-	774	5	NIC	ENSG00000123415.16	novel	926	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_4	69.3072867741914	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGATGCCTACCTTATGG	-54187304	False	NA	-16	True	AATAAA	-34	NA	54189018	54181452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_54181648_54182503_54182624_54183655_54183960_54187818_54187906_54188950
transcript_33206.known	chr12	-	627	4	FSM	ENSG00000123415.16	ENST00000243112.9	627	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	66.1362230551458	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCCTCATCTGTAAAACA	-54187262	True	NA	-34	True	AATAAA	-16	NA	54188976	54181470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54181648_54182503_54182624_54183655_54183960_54188950
transcript_33213.known	chr12	-	1571	4	FSM	ENSG00000123415.16	ENST00000337581.7	1571	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	79.1243746684084	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCATCTGTAAAACAGGG	-54187260	True	NA	-31	True	AATAAA	-19	NA	54188974	54181467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54183655_54183960_54187818_54187906_54188950
transcript_33214.known	chr12	-	465	4	FSM	ENSG00000123415.16	ENST00000507904.5	465	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	111.251466906683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATTGTGGGGCCTGTGCT	-54187276	True	NA	NA	False	NA	NA	NA	54188990	54182584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54183655_54183960_54188514_54188597_54188950
transcript_33223.known	chr12	-	821	3	FSM	ENSG00000250654.7	ENST00000505259.2	821	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCGGCTTTATGTACATGT	-54081707	True	NA	NA	False	AATATA	-17	NA	54081823	54078922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54079441_54080226_54080345_54081638
transcript_33233.known	chr12	-	1697	3	FSM	ENSG00000123415.16	ENST00000508394.6	1697	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	81	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGAGAGAGTCTGGGCTT	-54187280	True	NA	NA	False	NA	NA	NA	54188994	54181274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54183655_54183960_54188950
transcript_33234.known	chr12	+	528	2	FSM	ENSG00000249388.3	ENST00000504891.1	528	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAACCAGTGGACCTCTT	54082107	False	NA	NA	False	AATAAA	-14	NA	54082117	54102693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54082166_54102213
transcript_33235.known	chr12	+	1369	2	FSM	ENSG00000250742.5	ENST00000508564.1	1369	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGTTCGGAGTCAGCTG	54126033	False	NA	NA	False	AATAAA	-16	NA	54126097	54132843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54126613_54131989
transcript_33236.known	chr12	+	597	2	FSM	ENSG00000249388.3	ENST00000666027.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGTGGACCTCTTTTTAAA	54082687	False	NA	NA	False	AATAAA	-20	NA	54082697	54102699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54082824_54102228
transcript_33237.known	chr12	-	1422	3	FSM	ENSG00000123415.16	ENST00000505662.1	1422	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	53.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTATGCCTCAGGCTCC	-54186192	False	NA	-48	True	AATAAA	-2	NA	54187906	54181484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54182624_54183764_54183960_54187818
transcript_33238.known	chr12	-	410	2	FSM	ENSG00000250432.5	ENST00000505661.1	410	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCTACTGTGTTTTGGGG	NA	False	NA	-1	True	AATAAA	-14	NA	54125992	54121278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54121456_54125759
transcript_33246.known	chr12	+	2067	10	FSM	ENSG00000135486.19	ENST00000678077.1	2067	10	0	0	0	0	multi-exon	FALSE	canonical	2	97	junction_1	4694.44107297709	37540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGAATGAAATGACAACT	54066944	False	NA	8	True	AATAAA	-12	NA	54280871	54285239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54281296_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_33255.known	chr12	+	1232	9	FSM	ENSG00000111481.10	ENST00000549043.5	1232	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	466.429104339556	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGGACAACATGGAAG	54315378	True	NA	NA	False	NA	NA	NA	54325128	54351102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54340462_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_3326.known	chr1	+	4377	4	FSM	ENSG00000060642.12	ENST00000674222.1	4377	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	31.1697859401626	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	26787539	True	NA	NA	False	AATAAA	-16	NA	26787966	26800659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26787990_26790758_26790894_26794112_26795235_26797562
transcript_33262.known	chr12	+	880	8	FSM	ENSG00000111481.10	ENST00000455864.6	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	422.387577120969	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATCCCAACAGCCCAG	54315388	True	NA	50	True	NA	NA	NA	54325138	54350913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_33288.known	chr12	-	894	5	FSM	ENSG00000094916.16	ENST00000550411.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	189.577161071686	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGGATGGTCTCTGTC	-54251981	True	NA	NA	False	AAGAAA	-15	NA	54259545	54241754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259269
transcript_3329.known	chr1	+	4673	4	FSM	ENSG00000060642.12	ENST00000674202.1	4673	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	33.0252428706689	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCTGTCCTCAAATAACT	26787522	True	NA	NA	False	AATAAA	-16	NA	26787949	26800659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26788269_26790758_26790894_26794112_26795235_26797562
transcript_33290.known	chr12	+	281	3	FSM	ENSG00000135486.19	ENST00000677778.1	281	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	244	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54280820	True	NA	39	True	AATAAA	-15	NA	54282799	54287087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54282875_54286661_54286733_54286952
transcript_33291.known	chr12	+	242	3	FSM	ENSG00000135486.19	ENST00000678103.1	242	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	244	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54286222	False	NA	39	True	AATAAA	-15	NA	54286246	54287087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54286283_54286661_54286733_54286952
transcript_33295.known	chr12	-	1656	3	FSM	ENSG00000123405.14	ENST00000435572.7	1656	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3.5	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTTCACTGTGTCTTC	-54300759	True	NA	-5	True	TATAAA	-15	NA	54301015	54292110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54293382_54295134_54295305_54300800
transcript_33297.known	chr12	-	2627	2	FSM	ENSG00000094916.16	ENST00000618078.1	2627	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTATTAAACATTTTT	-54239729	True	NA	NA	False	AATAAA	-29	NA	54280133	54271840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54274342_54280007
transcript_33298.known	chr12	-	11546	5	FSM	ENSG00000094916.16	ENST00000209875.9	11546	5	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_4	41.3702791868752	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGAGTGGTGGTTTAA	-54239718	True	NA	-7	True	AATAAA	-20	NA	54280122	54230941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54280007
transcript_33299.known	chr12	-	1832	5	FSM	ENSG00000094916.16	ENST00000439541.6	1832	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	171.844951918874	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATTTACCACCAAGAGT	-54252028	True	NA	NA	False	NA	NA	NA	54259592	54240624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54241906_54246114_54246216_54252040_54252228_54257513_54257693_54259508
transcript_33300.known	chr12	+	1234	11	FSM	ENSG00000135486.19	ENST00000547566.5	1234	11	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_9	5569.26139088479	9306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGCTTGTTTTGTCCTCC	54066820	True	NA	40	True	AATAAA	-16	NA	54280747	54287088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54286661_54286733_54286952
transcript_33301.known	chr12	+	2278	10	FSM	ENSG00000135486.19	ENST00000677249.1	2278	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	4724.11971811798	37523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	54280669	False	NA	42	True	NA	NA	NA	54280690	54285745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282663_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_33302.known	chr12	+	1294	10	FSM	ENSG00000135486.19	ENST00000330752.12	1294	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	4723.82208977037	37926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGTGTAAAGTTAGTC	54066847	True	NA	23	True	AATAAA	-15	NA	54280774	54284881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282670_54282842_54282875_54283811_54283968_54284257_54284318_54284548
transcript_33303.known	chr12	+	1539	9	FSM	ENSG00000135486.19	ENST00000547276.5	1539	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	5000.16737219865	7992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACAACTGTATGGATTTGG	54066852	True	NA	20	True	AATAAA	-24	NA	54280779	54285251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281503_54281794_54281942_54282089_54282301_54282393_54282487_54282572_54282597_54283826_54283968_54284257_54284318_54284548
transcript_33304.known	chr12	+	2515	9	FSM	ENSG00000135486.19	ENST00000679228.1	2515	9	0	0	0	0	multi-exon	FALSE	canonical	3	11777	junction_6	1180.93373411678	44035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGCCTTACCTTTGGTGCT	54066821	True	NA	42	True	NA	NA	NA	54280748	54285745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54280823_54281385_54281942_54282089_54282301_54282393_54282487_54282572_54282666_54282799_54282875_54283811_54283968_54284257_54284318_54284548
transcript_33305.known	chr12	+	362	3	FSM	ENSG00000135486.19	ENST00000677840.1	362	3	0	0	0	0	multi-exon	FALSE	canonical	1	72	junction_1	208	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54283047	True	NA	39	True	AATAAA	-15	NA	54283811	54287087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54283968_54286661_54286733_54286952
transcript_33306.known	chr12	+	925	2	FSM	ENSG00000135486.19	ENST00000551665.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGTTTTTTTTTTTAATA	54285779	False	NA	3	True	NA	NA	NA	54285906	54287051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54286733_54286952
transcript_33307.known	chr12	+	372	3	FSM	ENSG00000135486.19	ENST00000551803.1	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	237.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGCTTGTTTTGTCCTC	54285819	False	NA	39	True	AATAAA	-15	NA	54285946	54287087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54286113_54286661_54286733_54286952
transcript_33308.known	chr12	+	1890	9	FSM	ENSG00000111481.10	ENST00000262061.7	1890	9	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_1	227.003166277477	4004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTGTGTGATGTTTC	54315380	True	NA	14	True	AATAAA	-15	NA	54325130	54351846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54340546_54340616_54342205_54342288_54343224_54343317_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_33309.known	chr12	+	736	7	FSM	ENSG00000111481.10	ENST00000549116.5	736	7	0	0	0	0	multi-exon	TRUE	canonical	2	17	junction_2	523.376033289854	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGAGTGTTTTCCTCCCT	54315393	True	NA	16	True	ATTAAA	-16	NA	54325143	54350879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54325182_54340546_54340616_54345459_54345516_54347766_54347845_54347999_54348052_54349619_54349659_54350475
transcript_3331.known	chr1	+	2181	4	FSM	ENSG00000060642.12	ENST00000374145.6	2181	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	50.2946871503895	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAATAAAGTGGGACCATT	26787749	False	NA	-23	True	NA	NA	NA	26788176	26798268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26788395_26790758_26790894_26794112_26795235_26797562
transcript_33310.known	chr12	+	463	4	FSM	ENSG00000135486.19	ENST00000677191.1	463	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6770.2422901006	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTAAGCACCTTTTTGT	54280820	True	NA	18	True	NA	NA	NA	54282799	54284317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54282875_54283062_54283235_54283811_54283968_54284257
transcript_33314.known	chr12	-	2369	8	FSM	ENSG00000161642.18	ENST00000551109.5	2369	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	27.2651380906468	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGACTCAGACTCTGTCT	-54384648	False	1119	-5	True	AATAAA	-26	NA	54385767	54369132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54385672
transcript_33315.known	chr12	-	2331	8	FSM	ENSG00000161642.18	ENST00000338010.9	2331	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	17.8142341619142	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGCCCCTAGACTCAGAC	-54390179	True	NA	-12	True	AATAAA	-19	NA	54391298	54369139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54370487_54370625_54370722_54370926_54371097_54371472_54371716_54373972_54374136_54375843_54375955_54384427_54384565_54391234
transcript_33316.known	chr12	-	807	9	FSM	ENSG00000170627.11	ENST00000305879.8	807	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	2.28787565221539	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATAGTTTGGTCAAGTA	-54473530	True	NA	-5	True	AATAAA	-17	NA	54473602	54455956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54465066_54465168_54471232_54471278_54473545
transcript_33317.known	chr12	-	671	8	FSM	ENSG00000170627.11	ENST00000552395.5	671	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	3.68117106477861	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTTAATAGTTTGGTCAA	-54473498	False	NA	-8	True	AATAAA	-14	NA	54473570	54455959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54456154_54459088_54459126_54460376_54460472_54462108_54462173_54462641_54462726_54463170_54463298_54471232_54471278_54473545
transcript_33318.known	chr12	-	1828	7	FSM	ENSG00000135447.17	ENST00000257905.13	1828	7	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	27.0025718939676	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCAGGCCTGGTCTCCCTTC	-54586659	True	NA	-13	True	NA	NA	NA	54588659	54579245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_54580393_54580943_54581051_54581975_54582132_54582731_54582796_54583210_54583249_54584259_54584321_54588404
transcript_33323.known	chr12	+	485	4	FSM	ENSG00000172551.12	ENST00000308796.11	485	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAATGGTATTTCTTATG	NA	False	NA	NA	False	AATAAA	-19	NA	54854515	54858387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_54854641_54855115_54855158_54856769_54856893_54858192
transcript_3333.known	chr1	+	4972	4	FSM	ENSG00000060642.12	ENST00000674273.1	4972	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	47.4856703531591	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTATGCCTCCTGTCCTCA	26787830	True	NA	NA	False	AATAAA	-9	NA	26788194	26800652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26788820_26790758_26790894_26794112_26795235_26797562
transcript_33334.known	chr12	+	571	4	FSM	ENSG00000135441.8	ENST00000548925.6	562	4	-9	0	-1	0	multi-exon	FALSE	canonical	3	867	junction_1	143.327906874024	10194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55716022	False	NA	8	True	AATAAA	-16	NA	55716036	55719703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55719498
transcript_33335.known	chr12	+	3382	4	FSM	ENSG00000258311.5	ENST00000550412.5	3382	4	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	493.073580265213	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTGACCCCATTTAAGT	55716021	False	NA	5	True	AATAAA	-30	NA	55716035	55724703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55716932_55717006_55719090_55719224_55721688
transcript_33346.known	chr12	+	1229	3	FSM	ENSG00000135441.8	ENST00000549147.1	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_1	157	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCCTGGGGGCACTTCA	55716023	False	NA	NA	False	NA	NA	NA	55716037	55720087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55716932_55717006_55719090
transcript_33349.known	chr12	+	421	3	FSM	ENSG00000135441.8	ENST00000553100.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	567.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGACAAGCCTTGAATAAAAC	55708393	True	NA	-25	True	NA	NA	NA	55716080	55719670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716197_55719090_55719224_55719498
transcript_33351.known	chr12	+	525	3	FSM	ENSG00000135441.8	ENST00000548556.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	537.5	1437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGTGGTGTGTTTCAGA	55714127	True	NA	8	True	AATAAA	-16	NA	55716530	55719703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716718_55719090_55719224_55719498
transcript_33352.known	chr12	+	367	3	FSM	ENSG00000258311.5	ENST00000549424.1	367	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	35.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCGGGGTCACCCTTG	55714186	False	NA	NA	False	NA	NA	NA	55716589	55721794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55716718_55719090_55719224_55721688
transcript_33355.known	chr12	+	1316	2	FSM	ENSG00000170439.8	ENST00000394252.4	1316	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACTAGACTGATGGCAGCA	55681529	True	NA	7	True	AATAAA	-18	NA	55681735	55684611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55682253_55683812
transcript_33357.known	chr12	+	1368	3	NNC	ENSG00000170439.8	novel	1316	2	NA	NA	-58	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	9.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCACTAGACTGATGGCA	55681471	True	NA	4	True	AATAAA	-15	NA	55681677	55684608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_55682253_55683812_55684047_55684049
transcript_33372.known	chr12	-	981	8	FSM	ENSG00000135404.12	ENST00000420846.7	981	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_7	1010.90714969582	9672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCTTGATTCCTTCCTTTC	-55728611	False	NA	-2	True	NA	NA	NA	55728650	55725442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728515
transcript_33375.known	chr12	-	1233	8	FSM	ENSG00000135404.12	ENST00000549117.5	1233	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	990.426129687291	2260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGACCGAAAAGAGATGGT	NA	False	NA	-41	True	ATTAAA	-13	NA	55729707	55725481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55729281
transcript_33385.known	chr12	-	870	7	FSM	ENSG00000135404.12	ENST00000550776.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1095.2900174028	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCCTCATCTGGGGGAG	-55727776	False	NA	-105	True	NA	NA	NA	55727815	55725545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55727611
transcript_33386.known	chr12	-	779	7	FSM	ENSG00000135404.12	ENST00000546939.5	779	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1095.2900174028	11640	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	-55727861	False	NA	-29	True	ATTAAA	-25	NA	55727900	55725469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55727863
transcript_33392.known	chr12	+	1443	2	FSM	ENSG00000258056.3	ENST00000552576.3	1458	2	10	5	10	-5	multi-exon	FALSE	canonical	3	16	junction_1	0	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTAGTTTTTCCTCTTTTT	55728655	True	NA	19	True	NA	NA	NA	55729103	55730852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55729356_55729661
transcript_33393.known	chr12	-	829	8	FSM	ENSG00000135404.12	ENST00000550050.5	829	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	1036.50992099764	24558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTCAATTAAACGGATTA	-55691949	True	NA	-66	True	NA	NA	NA	55729000	55725506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726964_55727150_55727340_55728275_55728353_55728952
transcript_33394.known	chr12	-	949	7	FSM	ENSG00000135404.12	ENST00000552692.5	949	7	0	0	0	0	multi-exon	FALSE	canonical	3	2791	junction_3	136.235906508608	16700	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATGGTCTGAGTTTGTCT	-55728443	False	NA	-29	True	ATTAAA	-25	NA	55728482	55725469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275
transcript_33395.known	chr12	-	499	3	FSM	ENSG00000135404.12	ENST00000548117.5	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	2904	junction_2	40.5	5825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATGCTTGATTCCTTC	-55726317	False	NA	-7	True	NA	NA	NA	55726356	55725447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725627_55725812_55725897_55726120
transcript_33396.known	chr12	-	845	7	FSM	ENSG00000135404.12	ENST00000552164.5	845	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	1082.41114595559	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAGATAACCCTGAGCAG	-55691926	True	NA	NA	False	NA	NA	NA	55728977	55725811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55725897_55726120_55726262_55726699_55726796_55726889_55726965_55727150_55727340_55728275_55728353_55728795
transcript_3341.known	chr1	+	1308	1	FSM	ENSG00000175793.12	ENST00000339276.6	1308	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	76	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTCTCTCTTCCAGTT	26862761	True	NA	11	True	AATAAA	-18	NA	26863148	26864456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26863100_26864500
transcript_33422.known	chr12	-	3236	9	FSM	ENSG00000123342.16	ENST00000322569.9	3236	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.22474487139159	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGGCGTCTG	-55842907	True	NA	NA	False	AATAAA	-17	NA	55842936	55835432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55837375_55837554_55837683_55837842_55838008_55838605_55838735_55839495_55839742_55840666_55840883_55841105_55841237_55842352_55842439_55842743
transcript_33428.known	chr12	-	3256	7	FSM	ENSG00000135392.19	ENST00000678005.2	3256	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_6	35.5933826558939	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCTTCCCTCTTTGT	-55825692	True	NA	-29	True	TATAAA	-15	NA	55829587	55820984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55822188_55822372_55822476_55822571_55822733_55823069_55823190_55823401_55823509_55827251_55828715_55829488
transcript_3343.nnic	chr1	-	606	3	NNC	ENSG00000142751.15	novel	715	4	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	86	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTCCAAACTTTTCT	-26887599	True	NA	0	True	AATACA	-21	NA	26890295	26879375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_26879750_26884159_26884291_26890194
transcript_3344.known	chr1	-	4665	5	FSM	ENSG00000142751.15	ENST00000374135.9	4665	5	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	10.5593560409714	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGTGTATTCTCTTTT	-26887587	True	NA	0	True	AATAAA	-18	NA	26890283	26876131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26879750_26884159_26884291_26885972_26886134_26888968_26889126_26889685
transcript_33442.known	chr12	+	1258	4	FSM	ENSG00000135414.10	ENST00000546799.1	1258	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	8.37987005998436	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTCAGTCCTTTTCCTTG	55742818	False	NA	2	True	AATAAA	-15	NA	55743398	55757127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55743762_55748585_55748984_55749501_55749884_55757012
transcript_33443.known	chr12	+	760	4	FSM	ENSG00000123353.10	ENST00000552672.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	186.456429226777	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGTTTTGCTGTGTATT	55813072	True	NA	20	True	NA	NA	NA	55818040	55820712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818113_55819090_55819174_55819341_55819494_55820259
transcript_33445.known	chr12	+	671	4	FSM	ENSG00000123353.10	ENST00000548974.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.039431780717	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTTTCCCAGACTCCCA	55813361	False	NA	63	True	TTTAAA	-15	NA	55818329	55820513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818420_55818998_55819174_55819341_55819494_55820259
transcript_33446.known	chr12	+	593	4	FSM	ENSG00000182796.15	ENST00000635938.1	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	16.9771087709958	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTGAGCCCACAGGACCT	55829936	True	NA	NA	False	NA	NA	NA	55830838	55835047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55832958_55833015_55833446_55833542_55834850
transcript_33448.known	chr12	+	575	4	FSM	ENSG00000182796.15	ENST00000637951.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	21.4165045389453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTACCCCTGTGAGGGCC	55829938	True	NA	NA	False	NA	NA	NA	55830840	55835007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55832958_55833039_55833446_55833542_55834850
transcript_33453.known	chr12	+	8801	3	FSM	ENSG00000135414.10	ENST00000257868.10	8801	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	3	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTCTCTTTTCTATTT	55743061	True	NA	8	True	AATAAA	-24	NA	55743121	55757264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55743762_55748585_55748984_55749501
transcript_33455.known	chr12	+	438	3	FSM	ENSG00000123353.10	ENST00000550836.1	438	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATACTGTCTTCTACACCTTT	55813075	True	NA	26	True	TATAAA	-21	NA	55818043	55820476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818113_55819341_55819494_55820259
transcript_33459.known	chr12	-	898	11	FSM	ENSG00000205323.9	ENST00000336133.8	898	11	0	0	0	0	multi-exon	FALSE	canonical	3	2338	junction_1	157.957715860923	21518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGTGTTTTATTAGGTGC	-55777624	True	NA	-11	True	AATAAA	-19	NA	55817724	55757269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_33460.known	chr12	-	997	11	FSM	ENSG00000205323.9	ENST00000552884.5	997	11	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_9	1020.60535467927	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGATATGTTCAGAGGGG	-55777622	True	NA	NA	False	AATAAA	-16	NA	55817722	55752579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55752841_55757382_55757554_55760550_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55803628_55803729_55817665
transcript_33461.known	chr12	-	726	10	FSM	ENSG00000205323.9	ENST00000552080.1	726	10	0	0	0	0	multi-exon	FALSE	canonical	3	2407	junction_3	141.358313655427	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTGCCCAGGAAGTG	-55777609	True	NA	NA	False	NA	NA	NA	55817709	55760423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55760641_55789074_55789144_55790566_55790593_55794358_55794388_55794806_55794881_55796024_55796077_55800561_55800630_55800853_55800901_55803628_55803729_55817665
transcript_33462.known	chr12	+	2019	4	FSM	ENSG00000123353.10	ENST00000243045.10	2019	4	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_1	46.5403051128804	1422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTAGGTGTTGGGGGAG	55813072	True	NA	NA	False	AATAAA	-15	NA	55818040	55821879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55818113_55818998_55819174_55819341_55819494_55820259
transcript_33463.known	chr12	+	2313	4	FSM	ENSG00000182796.15	ENST00000508246.6	2313	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	10.9848380355227	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCAGGGAGTCCAGCCTCT	55829938	True	NA	10	True	AATAAA	-17	NA	55830840	55836244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55831256_55831350_55832958_55833542_55834850
transcript_33464.known	chr12	+	884	5	FSM	ENSG00000182796.15	ENST00000636428.1	884	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	14.0890028036054	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGAAATTGACTCCCGAA	55829925	True	NA	NA	False	AATAGA	-15	NA	55830827	55835234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55831084_55831256_55831350_55832958_55833015_55833446_55833542_55834850
transcript_33467.known	chr12	+	2727	24	FSM	ENSG00000065357.20	ENST00000331886.10	2727	24	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	10.796449742028	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTACACTTCCTTC	55930888	True	NA	26	True	AATAAA	-33	NA	55931161	55954023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55931345_55936422_55936568_55937016_55937091_55937407_55937544_55937977_55938053_55938510_55938561_55938914_55938990_55939185_55939306_55939414_55939530_55940081_55940171_55940313_55940434_55940623_55940723_55940896_55940981_55941251_55941326_55941509_55941585_55941997_55942084_55942173_55942264_55951622_55951784_55952034_55952100_55952340_55952432_55952733_55952933_55953039_55953161_55953349_55953411_55953684
transcript_33490.known	chr12	-	884	3	FSM	ENSG00000170473.17	ENST00000454792.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	3.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGTGAATAAATGTGATTA	-55917626	True	NA	NA	False	AATAAA	-14	NA	55927875	55913825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55914367_55927075_55927268_55927724
transcript_33492.known	chr12	-	653	2	FSM	ENSG00000170473.17	ENST00000549939.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTGTCACTGTTTTG	-55927744	False	NA	NA	False	ATTAAA	-1	NA	55927756	55913745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55914367_55927724
transcript_33494.known	chr12	-	1207	3	FSM	ENSG00000170473.17	ENST00000408946.7	1207	3	0	0	0	0	multi-exon	FALSE	canonical	3	783	junction_2	29.5	2021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGCCTCCTTATTTT	-55917645	True	NA	-2	True	AATAAA	-17	NA	55927894	55901412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55902356_55903386_55903481_55927724
transcript_33495.known	chr12	-	1073	3	FSM	ENSG00000170473.17	ENST00000398213.4	1073	3	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_2	353.5	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTTTGCCTCCTTATTT	-55927100	False	10249	-3	True	AATAAA	-16	NA	55927112	55901413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55902356_55903386_55903481_55927075
transcript_33497.known	chr12	-	2204	12	FSM	ENSG00000185664.15	ENST00000548493.5	2204	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	174.129713216307	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	NA	False	NA	-9	True	AATAAA	-14	NA	55966736	55954105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935_55966063_55966677
transcript_33502.known	chr12	-	1867	9	FSM	ENSG00000185664.15	ENST00000550464.5	1867	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	193.079606315633	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTGGTTTTTCTGTTGCT	-55963152	True	NA	-9	True	AATAAA	-14	NA	55966042	55954105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55954350_55955273_55955362_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55965935
transcript_33506.known	chr12	+	2240	7	FSM	ENSG00000123374.11	ENST00000266970.9	2240	7	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_3	29.2498812913071	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTCCTCCTCTTATTT	55959775	True	NA	23	True	ATTAAA	-26	NA	55966829	55972789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55969474_55969577_55971043_55971248_55971520
transcript_33510.known	chr12	+	1260	6	FSM	ENSG00000123374.11	ENST00000354056.4	1260	6	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_4	138.260623461635	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTCCTACACGTTAGATT	55959776	True	NA	NA	False	TATAAA	-16	NA	55966830	55971912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55967125_55967856_55967935_55968048_55968170_55968777_55968949_55971043_55971248_55971520
transcript_33514.known	chr12	-	2127	11	FSM	ENSG00000185664.15	ENST00000449260.6	2127	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	174.733511382333	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTTTTTCTGTTGCTT	-55965975	False	NA	-8	True	AATAAA	-15	NA	55966022	55954104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55954350_55955273_55955383_55955463_55955670_55955778_55955864_55956102_55956220_55956948_55957672_55957922_55958085_55958472_55958608_55961316_55961464_55961621_55961733_55965935
transcript_33515.known	chr12	-	461	3	FSM	ENSG00000185664.15	ENST00000549413.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	577	junction_2	30.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCTCGCTCTGTCGCCC	-55965974	False	NA	NA	False	NA	NA	NA	55966021	55961199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_55961464_55961621_55961733_55965935
transcript_33519.known	chr12	+	3322	6	FSM	ENSG00000111540.16	ENST00000553116.5	3322	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	182.761702771669	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATTGGAGTGTTGCTTT	55973898	False	NA	NA	False	AGTAAA	-19	NA	55973912	55994706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55974001_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_33520.known	chr12	+	5273	6	FSM	ENSG00000111540.16	ENST00000360299.10	5273	6	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	70.0097136117553	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGTTGTTTCATTTTTG	55971181	True	NA	13	True	AATAAA	-14	NA	55974077	55996683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359_55991454_55992096
transcript_33523.nic	chr12	+	1219	5	ISM	ENSG00000111540.16	ENST00000360299.10	5273	6	-46	4743	-42	0	5prime_fragment	FALSE	canonical	3	291	junction_1	76.095334942426	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGCAAATAGTGAACCCT	55971135	True	NA	NA	False	NA	NA	NA	55974031	55991940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_55974140_55986868_55987124_55989946_55990099_55990681_55990805_55991359
transcript_33526.known	chr12	+	2394	6	FSM	ENSG00000139531.13	ENST00000394115.6	2394	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	55.7544617048717	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTACTTTTCTAATAAAT	55995587	True	NA	-20	True	NA	NA	NA	55997287	56005486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_55997614_55997724_55999332_55999459_56002211_56002272_56002542_56002721_56003617
transcript_33529.known	chr12	+	2319	5	FSM	ENSG00000139531.13	ENST00000266971.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	49.1750699033565	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55995575	True	NA	19	True	AATAAA	-21	NA	55997275	56005525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_55997614_55997724_56002211_56002272_56002542_56002721_56003617
transcript_33530.known	chr12	+	2306	4	FSM	ENSG00000139531.13	ENST00000356124.8	2306	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	63.8974873440958	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGGCCTGGGGAGTGA	55997169	False	NA	19	True	AATAAA	-21	NA	55997179	56005525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_56002211_56002272_56002542_56002721_56003617
transcript_33531.known	chr12	+	563	3	FSM	ENSG00000139531.13	ENST00000550340.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGACACCTATCGCTTACA	55995586	True	NA	NA	False	NA	NA	NA	55997286	56004067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_55997340_56002211_56002272_56003617
transcript_33532.known	chr12	+	623	5	FSM	ENSG00000197728.11	ENST00000552361.1	623	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7265.68000946918	2073	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	56041754	False	NA	17	True	AATAAA	-18	NA	56041892	56044223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56042065_56042132_56042170_56042424_56042603_56043362_56043494_56044118
transcript_33534.known	chr12	+	1140	4	FSM	ENSG00000197728.11	ENST00000646449.2	1140	4	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	2794.30866027518	1896	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTGTGTGAAATGGAGAT	56040100	True	NA	24	True	ATTAAA	-39	NA	56041917	56044697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56042170_56042424_56042603_56043362_56043494_56044118
transcript_33540.known	chr12	+	1204	3	FSM	ENSG00000197728.11	ENST00000548590.1	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	12994	junction_1	925	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCATGTTAAGTGTATC	55782154	True	NA	17	True	AATAAA	-18	NA	56042139	56044223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56042170_56042424_56043494_56044118
transcript_33546.known	chr12	+	5615	28	FSM	ENSG00000065361.17	ENST00000267101.8	5615	28	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	23.9102115577268	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCCTGTCTGTCAAATGA	56079091	True	NA	15	True	AATAAA	-21	NA	56080164	56103505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530_56086657_56087576_56087643_56087794_56087914_56088020_56088163_56088542_56088657_56088747_56088869_56092746_56092821_56092985_56093077_56093344_56093551_56093763_56093897_56094098_56094190_56094401_56094557_56095256_56095311_56095664_56095807_56096502_56096623_56096747_56096847_56097044_56097231_56097784_56097941_56098499_56098576_56098758_56098906_56099647_56099746_56099837_56100030_56100173_56100246_56101060_56101362_56101528
transcript_33563.known	chr12	+	660	4	FSM	ENSG00000065361.17	ENST00000546884.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	9.17726659862414	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGATTGCTCCCCAGTCCCA	56079130	False	NA	NA	False	NA	NA	NA	56080203	56086672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56080383_56083750_56083903_56084994_56085182_56086530
transcript_33565.known	chr12	+	1027	3	FSM	ENSG00000065361.17	ENST00000411731.6	1027	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	3.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTGGTGCGCACCTGTA	56080011	False	NA	10	True	AATAAA	-23	NA	56080136	56085623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56080383_56083750_56083903_56084994
transcript_33569.known	chr12	+	2386	13	FSM	ENSG00000170515.14	ENST00000303305.11	2386	13	0	0	0	0	multi-exon	FALSE	canonical	3	1583	junction_4	102.848965586545	3781	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTTGTATGCTGCTCT	56073534	True	NA	18	True	AATAAA	-21	NA	56104558	56113910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56104826_56106587_56106717_56106989_56107096_56107186_56107257_56107520_56107614_56109229_56109294_56109856_56109936_56110398_56110478_56110558_56110693_56110963_56111059_56111181_56111310_56111475_56111530_56112822
transcript_33570.known	chr12	-	434	2	FSM	ENSG00000257553.1	ENST00000548595.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGCAAGGGAGCGGGCAG	-56113885	False	NA	NA	False	NA	NA	NA	56113905	56104613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56104783_56113640
transcript_33586.known	chr12	+	469	4	FSM	ENSG00000229117.9	ENST00000501597.3	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	5168	junction_1	7443.74423406811	340546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCTATTATGTTTTTT	56088164	True	NA	7	True	AATAAA	-38	NA	56116589	56117832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116660_56116774_56116800_56117188_56117212_56117481
transcript_33587.known	chr12	+	676	3	FSM	ENSG00000229117.9	ENST00000546591.6	676	3	0	0	0	0	multi-exon	FALSE	canonical	3	13136	junction_1	5109.5	32199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTGGAGTTGGATGGG	56088207	True	NA	31	True	TATAAA	-34	NA	56116632	56117967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116800_56117188_56117212_56117481
transcript_33588.known	chr12	+	551	4	FSM	ENSG00000229117.9	ENST00000358888.7	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_2	9900.04488205315	14013	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCATCTTGTCTATTATG	56088207	True	NA	1	True	AATAAA	-32	NA	56116632	56117826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116660_56116774_56116931_56117188_56117212_56117481
transcript_33589.known	chr12	+	595	2	FSM	ENSG00000229117.9	ENST00000552314.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	23355	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTTCATCGCCCTCTGA	56116716	False	NA	NA	False	NA	NA	NA	56116780	56117645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56117212_56117481
transcript_3359.known	chr1	-	2125	7	FSM	ENSG00000198746.13	ENST00000361720.10	2125	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	7.55902698029904	263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCTTACTTTTCTAATT	-26899254	True	NA	-16	True	AATAAA	-17	NA	26900467	26890487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26891227_26892410_26892539_26892669_26892792_26893388_26893449_26894235_26894411_26897300_26897726_26899991
transcript_33590.known	chr12	+	335	4	FSM	ENSG00000229117.9	ENST00000546485.5	335	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_2	9942.56822399972	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTGGTCCTCTGCCCTG	56088206	True	NA	NA	False	CATAAA	-10	NA	56116631	56117710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56116660_56116774_56116830_56117188_56117212_56117481
transcript_33591.known	chr12	+	3577	31	FSM	ENSG00000139641.13	ENST00000267113.4	3577	31	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_13	96.8266262737453	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTACTGCACGGCCTTTAT	56120091	True	NA	NA	False	NA	NA	NA	56128266	56144041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134079_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_33592.known	chr12	+	4180	31	FSM	ENSG00000139641.13	ENST00000394048.10	4180	31	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_18	51.1742665365665	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGGTTCTTTTCCTTAA	56120091	True	NA	19	True	ATTAAA	-17	NA	56128266	56144674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56128710_56130581_56130624_56130790_56130926_56131039_56131114_56131243_56131317_56131476_56131567_56131748_56131805_56132208_56132333_56132420_56132598_56132718_56132802_56133416_56133466_56133587_56133675_56133780_56133874_56134109_56134182_56134341_56134429_56136743_56136894_56137217_56137374_56137498_56137676_56137831_56137915_56138025_56138075_56138182_56138273_56138403_56138500_56138767_56138840_56138926_56139014_56142284_56142426_56142577_56142733_56142834_56142934_56143016_56143149_56143227_56143334_56143579_56143630_56143822
transcript_33594.known	chr12	+	7121	3	FSM	ENSG00000135482.7	ENST00000257940.7	7121	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	14	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTTTTTTTCCCCCTT	56116035	True	NA	NA	False	AATAAA	-18	NA	56118265	56127514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56118319_56119087_56119152_56120510
transcript_33595.known	chr12	+	590	2	FSM	ENSG00000135482.7	ENST00000549973.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGCTAGAACCAGGGCA	56116031	True	NA	NA	False	NA	NA	NA	56118261	56119620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56118319_56119087
transcript_33602.known	chr12	-	4271	30	FSM	ENSG00000139613.12	ENST00000394023.7	4271	30	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	84.922472862878	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTGATGTCAGCGTATGTG	-56184074	True	NA	-10	True	TTTAAA	-13	NA	56189567	56162982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56163766_56164302_56164369_56164647_56164732_56165317_56165700_56168059_56168195_56169528_56169696_56169775_56169912_56170143_56170209_56171270_56171433_56171678_56171938_56172427_56172491_56172584_56172705_56172936_56173030_56173695_56173850_56174650_56174765_56178021_56178094_56178403_56178535_56178809_56178848_56178996_56179057_56180976_56181102_56181481_56181598_56181703_56181836_56182003_56182080_56183860_56183931_56184174_56184245_56184843_56184937_56185029_56185112_56186154_56186241_56187186_56187307_56189350
transcript_3361.known	chr1	+	1792	9	FSM	ENSG00000090273.14	ENST00000321265.10	1792	9	0	0	0	0	multi-exon	TRUE	canonical	3	2986	junction_5	88.0943209009525	7138	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTAGTCTATGTATGTT	26862550	True	NA	9	True	AATAAA	-14	NA	26921742	26946871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26921930_26924088_26924167_26941456_26941661_26941752_26941819_26942659_26942777_26942870_26943066_26945389_26945474_26945567_26945687_26946129
transcript_33615.known	chr12	+	1034	8	FSM	ENSG00000196465.10	ENST00000550443.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	220.967630836625	1815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	NA	False	NA	18	True	AATAAA	-14	NA	56152438	56157976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56152632_56153808_56154093_56154812_56154841_56155054_56155199_56155418_56155593_56157467_56157546_56157697_56157736_56157881
transcript_33642.known	chr12	+	703	8	FSM	ENSG00000196465.10	ENST00000552568.5	703	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	229.630404016932	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56145647	True	NA	18	True	AATAAA	-14	NA	56152606	56157976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56152632_56153872_56154093_56154812_56154841_56155054_56155199_56155418_56155494_56157467_56157546_56157697_56157736_56157881
transcript_33643.known	chr12	+	322	3	FSM	ENSG00000196465.10	ENST00000550550.5	322	3	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	69.5	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGTTTCAGACTGCTAT	56157333	False	NA	18	True	AATAAA	-14	NA	56157356	56157976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56157546_56157697_56157736_56157881
transcript_33644.known	chr12	+	528	5	FSM	ENSG00000092841.19	ENST00000548580.5	528	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_2	4410.98024819881	20429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099285	True	NA	27	True	AATAAA	-15	NA	56158345	56161575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159974_56160149_56160242_56160321_56161386
transcript_33645.known	chr12	+	221	2	FSM	ENSG00000196465.10	ENST00000549380.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	0	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCAGACTGCTATTTTTT	56157591	False	NA	23	True	AATAAA	-19	NA	56157614	56157981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56157736_56157881
transcript_33646.known	chr12	+	683	7	FSM	ENSG00000092841.19	ENST00000547408.5	683	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5032.87491289908	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACATTCAGAGGGAAAGGA	56099307	True	NA	NA	False	AATACA	-45	NA	56158367	56163008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56162263_56162332_56162854
transcript_33647.known	chr12	+	502	6	FSM	ENSG00000092841.19	ENST00000549017.5	502	6	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_3	4304.06126350451	9744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099296	True	NA	26	True	AATAAA	-14	NA	56158356	56161574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56160024_56160149_56160242_56160321_56161386
transcript_33648.known	chr12	+	655	6	FSM	ENSG00000092841.19	ENST00000547649.5	655	6	0	0	0	0	multi-exon	FALSE	canonical	3	9526	junction_1	742.875601968459	106189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCGGTTCGGTTCTTTCT	56099301	True	NA	26	True	AATAAA	-14	NA	56158361	56161574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56161386
transcript_33649.known	chr12	+	708	7	FSM	ENSG00000092841.19	ENST00000550697.6	708	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	4951.44192522632	5804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCGGTTCTTTCTTTCCT	56099298	True	NA	31	True	AATAAA	-19	NA	56158358	56161579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_3365.nnic	chr1	-	1901	5	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	53	-3	at_least_one_novel_splicesite	TRUE	canonical	3	28	junction_4	101.625230627045	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	-26959282	True	NA	-20	True	NA	NA	NA	26960415	26949564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26953845_26953948_26960349
transcript_33650.known	chr12	+	573	7	FSM	ENSG00000092841.19	ENST00000548400.5	573	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_5	5218.45728853099	4002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGGTTCGGTTCTTTCTT	56099321	True	NA	27	True	AATAAA	-15	NA	56158381	56161575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56158712_56159586_56159623_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_33651.known	chr12	+	1564	6	FSM	ENSG00000092841.19	ENST00000550184.5	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	5189.70176407084	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAAACTTGCTCTC	56099288	True	NA	2	True	NA	NA	NA	56158348	56161550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56158405_56158683_56159731_56159974_56160149_56160242_56160321_56160625_56160671_56161386
transcript_33659.known	chr12	-	5216	7	FSM	ENSG00000181852.18	ENST00000615206.4	5216	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	55.5960130465006	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTCTGTGGCTGCTTTC	-56217536	False	NA	-1	True	AATACA	-21	NA	56221701	56202503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221590
transcript_33660.known	chr12	-	5593	7	FSM	ENSG00000181852.18	ENST00000345093.9	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	28.7909129182572	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTTTGATACACTGTCT	-56217757	True	NA	NA	False	AGTAAA	-25	NA	56221922	56202178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221759
transcript_33661.known	chr12	-	1193	7	FSM	ENSG00000181852.18	ENST00000552656.5	1193	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	37.6917320730511	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTCGACTGGCTATCA	-56217768	True	NA	NA	False	NA	NA	NA	56221933	56206446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56213957_56214071_56216428_56216614_56221902
transcript_33669.known	chr12	-	1001	5	FSM	ENSG00000181852.18	ENST00000548225.1	1001	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.5467347705608	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-56217695	True	NA	-12	True	ATTAAA	-16	NA	56221860	56210036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56210569_56212991_56213062_56213957_56214071_56216428_56216614_56221759
transcript_3367.known	chr1	-	1855	4	FSM	ENSG00000175707.10	ENST00000320567.6	1855	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	50.7302232949507	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATCTGCCTGCTTTCT	-26959335	True	NA	-17	True	NA	NA	NA	26960468	26949561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_26950152_26950681_26950757_26951341_26952413_26960349
transcript_33673.nic	chr12	-	1038	4	ISM	ENSG00000181852.18	ENST00000345093.9	5593	7	-45	7858	-34	0	5prime_fragment	FALSE	canonical	3	78	junction_3	38.7843038125248	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-56217802	True	NA	-12	True	ATTAAA	-16	NA	56221967	56210036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221759
transcript_33674.nic	chr12	-	904	4	ISM	ENSG00000181852.18	ENST00000552656.5	1193	7	-43	3590	-43	0	5prime_fragment	FALSE	canonical	3	51	junction_3	51.4220013439989	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	NA	False	NA	-12	True	ATTAAA	-16	NA	56221976	56210036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56210569_56213957_56214071_56216428_56216614_56221902
transcript_33675.nic	chr12	-	817	3	ISM	ENSG00000181852.18	ENST00000552244.5	716	5	-88	2398	2	0	5prime_fragment	TRUE	canonical	1	2	junction_2	82	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCCCTTTCAGTCCAAT	-56217766	True	NA	-12	True	ATTAAA	-16	NA	56221931	56210036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56210569_56213957_56214071_56221759
transcript_3368.nnic	chr1	-	2379	4	NNC	ENSG00000175707.10	novel	1855	4	NA	NA	-586	-3	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_3	106.145602305931	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGTATCTGCCTGCTT	-26961038	True	NA	-20	True	NA	NA	NA	26961054	26949564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_26950152_26950681_26950757_26951341_26952413_26960408
transcript_33680.known	chr12	-	2452	8	FSM	ENSG00000181852.18	ENST00000394013.6	2452	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.4158211725668	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTTTTGATGTTCCTA	-56217744	True	NA	-4	True	AAAAAG	-22	NA	56221909	56205449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56206799_56207645_56207750_56208162_56208299_56210296_56210569_56212995_56213139_56213957_56214071_56216428_56216614_56221759
transcript_33683.known	chr12	+	663	7	FSM	ENSG00000139579.13	ENST00000399713.6	663	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	90.1437124201621	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGACTGAGTGCCCCAC	56221809	True	NA	NA	False	NA	NA	NA	56222014	56229032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56222200_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33685.known	chr12	+	1411	7	FSM	ENSG00000139579.13	ENST00000341463.5	1411	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	88.3014093256098	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCACTCTACTCTGTGTTG	56220217	True	NA	4	True	AATAAA	-4	NA	56224400	56229844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56224522_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33689.known	chr12	+	1400	7	FSM	ENSG00000139579.13	ENST00000267023.9	1400	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	43.9042518821735	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220158	True	NA	14	True	AATAAA	-14	NA	56224341	56229854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56224442_56224833_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_3369.known	chr1	+	575	2	FSM	ENSG00000253368.4	ENST00000531285.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGATTAAGCGTAGCAAGC	26994306	False	NA	NA	False	NA	NA	NA	26994318	27000109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_26994631_26999846
transcript_33690.known	chr12	+	1775	6	FSM	ENSG00000139579.13	ENST00000380198.6	1775	6	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_4	14.661514246489	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTGGACTCCTTTG	56220175	True	NA	14	True	AATAAA	-14	NA	56224358	56229854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56224936_56225372_56225512_56225623_56225696_56226178_56226261_56226355_56226420_56229013
transcript_33697.known	chr12	+	1410	5	FSM	ENSG00000135469.14	ENST00000433805.6	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	30.8139578762612	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56266989	True	NA	NA	False	AATAAA	-16	NA	56267282	56270966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56267434_56267793_56267941_56269058_56269252_56269459_56269562_56270149
transcript_33699.nnic	chr12	+	1253	4	NIC	ENSG00000135469.14	novel	1410	5	NA	NA	-36	0	intron_retention	FALSE	canonical	1	8	junction_2	49.8263651761461	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCTTTATTATATTGTT	56266011	False	NA	NA	False	AATAAA	-16	NA	56267246	56270966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_56267434_56267793_56267941_56269459_56269562_56270149
transcript_3370.known	chr1	-	660	2	FSM	ENSG00000090020.11	ENST00000490329.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGTCAAGGGCTGCT	-27099671	False	NA	NA	False	AATAAA	-15	NA	27099682	27098815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27099005_27099211
transcript_33702.known	chr12	+	665	3	FSM	ENSG00000135469.14	ENST00000550071.1	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	26.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATTTAACTACCTGATT	56266991	True	NA	NA	False	NA	NA	NA	56267284	56269427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56267434_56267793_56267941_56269058
transcript_33703.known	chr12	-	4576	26	FSM	ENSG00000135473.16	ENST00000440411.8	4523	26	-53	0	0	0	multi-exon	TRUE	canonical	3	94	junction_14	19.5322912122465	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGAGAACTGCTAGTGTGG	NA	False	NA	-6	True	AATAAA	-29	NA	56334053	56316935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56317644_56318236_56318435_56319087_56319182_56319307_56319488_56319620_56319765_56319863_56320022_56322077_56322169_56322422_56322483_56322614_56322759_56323061_56323210_56323310_56323385_56323499_56323599_56323806_56323914_56324048_56324186_56324293_56324494_56324580_56324710_56325008_56325129_56325334_56325455_56326312_56326410_56326616_56326960_56327363_56327632_56327994_56328073_56328237_56328359_56328471_56328642_56332812_56333209_56333861
transcript_33706.known	chr12	-	3057	12	FSM	ENSG00000062485.19	ENST00000548567.5	3057	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	366.741267141828	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTGAGCCTATTATTAAA	-56282663	True	NA	-2	True	AATAAA	-16	NA	56300391	56271700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56298608_56298692_56300159
transcript_3371.known	chr1	+	994	8	FSM	ENSG00000186501.15	ENST00000486082.5	994	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	129.297000296659	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTCTCAGAAGCACCCT	27319414	True	NA	NA	False	NA	NA	NA	27322253	27335648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_33711.known	chr12	-	2915	11	FSM	ENSG00000062485.19	ENST00000351328.8	2915	11	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_3	63.3719180710194	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAGCCTATTATTAAATA	-56282602	True	NA	0	True	AATAAA	-18	NA	56300330	56271698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56273255_56273586_56273797_56274776_56274879_56275001_56275132_56275995_56276196_56282419_56282609_56282859_56282992_56283791_56283858_56285915_56286024_56286594_56286646_56300159
transcript_3372.known	chr1	+	1665	7	FSM	ENSG00000186501.15	ENST00000464720.5	1665	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	118.384495981902	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319407	True	NA	8	True	AATAAA	-15	NA	27322246	27336400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27330984_27331138_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_3373.known	chr1	+	986	7	FSM	ENSG00000186501.15	ENST00000478104.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	120.792866787185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACCTGTCAAGGTGGCCC	27319445	True	NA	NA	False	NA	NA	NA	27322284	27335824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27334666_27334755_27335378
transcript_33734.known	chr12	+	479	3	FSM	ENSG00000257303.3	ENST00000549565.3	485	3	0	6	0	-6	multi-exon	FALSE	canonical	0	0	junction_2	0.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAGCCAGAGTGAGCTA	NA	False	NA	NA	False	ATTAAA	-31	NA	56300075	56314802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56300188_56312406_56312500_56314528
transcript_3374.known	chr1	+	1511	6	FSM	ENSG00000186501.15	ENST00000608611.5	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	239	junction_5	20.4195984289604	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGTGCCCTGTCATTGTT	27319408	True	NA	8	True	AATAAA	-15	NA	27322247	27336400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27333957_27334055_27334150_27334282_27335378
transcript_33740.known	chr12	-	666	3	FSM	ENSG00000257727.6	ENST00000553164.1	666	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	772.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAATAAGAATAAAAGG	-56294716	True	NA	-32	True	AATAAA	-11	NA	56316000	56314507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56314967_56315129_56315243_56315906
transcript_33745.known	chr12	+	3539	2	FSM	ENSG00000257303.3	ENST00000660360.1	3539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAAAATCCTGTTTCTA	56300076	True	NA	NA	False	NA	NA	NA	56300112	56317992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56300188_56314528
transcript_33751.known	chr12	-	718	2	FSM	ENSG00000062485.19	ENST00000550996.1	718	2	0	0	0	0	multi-exon	FALSE	canonical	3	912	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCAGAGTAGTTGACC	-56282663	True	NA	NA	False	NA	NA	NA	56300391	56286159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56286646_56300159
transcript_33752.known	chr12	-	1450	6	FSM	ENSG00000257727.6	ENST00000273308.9	1450	6	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_2	129.74035609632	5341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTGTCAATCTGGACTA	-56294704	True	NA	-21	True	AATAAA	-16	NA	56315988	56309843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56310596_56310957_56311055_56311210_56311415_56314850_56314967_56315129_56315243_56315820
transcript_33753.known	chr12	-	556	3	FSM	ENSG00000257727.6	ENST00000551276.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	808.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCAAGTACAGTGGCTCA	-56315031	False	NA	-1	True	AATAAA	-19	NA	56315206	56312522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56312886_56314850_56314967_56315129
transcript_33754.known	chr12	-	817	3	FSM	ENSG00000257727.6	ENST00000548013.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	1577	junction_2	36	2345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTATCCTCATAATTAG	-56315872	False	NA	-14	True	AATAAA	-29	NA	56316047	56314489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56314967_56315129_56315243_56315820
transcript_33755.known	chr12	-	586	4	FSM	ENSG00000257727.6	ENST00000551720.5	586	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	752.935588214556	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGATTGATCCTTCCACCC	-56315944	False	NA	NA	False	NA	NA	NA	56316119	56311337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56311396_56314850_56314967_56315129_56315243_56315820
transcript_33756.known	chr12	-	595	2	FSM	ENSG00000135473.16	ENST00000549964.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATAGCCAGTACCGAGGAG	-56332707	True	NA	NA	False	NA	NA	NA	56333981	56332733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56333209_56333861
transcript_33757.nnic	chr12	+	814	5	NNC	ENSG00000110944.9	novel	709	5	NA	NA	-424	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.0096118312577	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	NA	False	NA	8	True	AATAAA	-19	NA	56333749	56340410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_56333796_56337029_56337084_56339425_56339525_56339690_56339838_56339942
transcript_33758.nic	chr12	+	974	4	ISM	ENSG00000110944.9	ENST00000619177.1	740	5	2616	-81	-2060	0	3prime_fragment	FALSE	canonical	1	1	junction_1	12.0277457017791	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	56336811	True	NA	8	True	AATAAA	-19	NA	56336823	56340410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_56337084_56339425_56339525_56339690_56339838_56339942
transcript_33759.known	chr12	+	1037	4	FSM	ENSG00000110944.9	ENST00000228534.6	1037	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.02768199119819	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAGTCTAATTTCTAGGC	56338663	True	NA	8	True	AATAAA	-19	NA	56338883	56340410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56339207_56339425_56339525_56339690_56339838_56339942
transcript_33761.known	chr12	-	3073	24	FSM	ENSG00000170581.14	ENST00000557235.5	3073	24	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_21	17.6658760270586	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGATAACTTGCTTTCTTCT	-56357406	True	NA	NA	False	NA	NA	NA	56360126	56342935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56343532_56343824_56344136_56346145_56346204_56346441_56346625_56346818_56346956_56348528_56348624_56348751_56348805_56348923_56349060_56349162_56349262_56349425_56349510_56349588_56349637_56350096_56350191_56350411_56350433_56350828_56350889_56351097_56351191_56351291_56351451_56354465_56354615_56354777_56354864_56355275_56355352_56355442_56355533_56355707_56355792_56356131_56356286_56356440_56356579_56360057
transcript_33763.nnic	chr12	+	501	2	Antisense	novelGene_ENSG00000175336.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTGTCAGGGTAGTA	NA	False	NA	NA	False	ATTAAA	-17	NA	56360249	56361173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_56360567_56360989
transcript_33766.known	chr12	-	4376	29	FSM	ENSG00000111602.12	ENST00000229201.4	4376	29	0	0	0	0	multi-exon	TRUE	canonical	3	91	junction_23	109.831039068458	839	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTGACTTGGCGATATGT	-56438781	True	NA	-6	True	ATTAAA	-27	NA	56449403	56417118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56417787_56417906_56418009_56418133_56418360_56420568_56420688_56420812_56420882_56420962_56421135_56421350_56421494_56421726_56421810_56421898_56422017_56422105_56422192_56422846_56422993_56423273_56423476_56423583_56423708_56423796_56423895_56424761_56424914_56425014_56425153_56428235_56428406_56428548_56428653_56428882_56429101_56430104_56430282_56430880_56430969_56431470_56431605_56432368_56432522_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_33769.nic	chr12	-	1141	7	ISM	ENSG00000111602.12	ENST00000553532.6	5158	29	-20	15750	-20	-10561	5prime_fragment	FALSE	canonical	3	442	junction_1	80.0924812673172	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTCTGAGTAGTGTGA	-56438824	True	NA	NA	False	AATAAA	-25	NA	56449446	56432112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_56432525_56433025_56433128_56433380_56433444_56433537_56433653_56433772_56433927_56434073_56434232_56449309
transcript_3377.known	chr1	+	368	4	FSM	ENSG00000186501.15	ENST00000466759.5	368	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	124.515951677776	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGAGCTATTGCTGGTTTG	27319414	True	NA	NA	False	AATAAA	-16	NA	27322253	27332559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27322392_27330719_27330805_27332069_27332102_27332446
transcript_33771.nnic	chr12	-	534	4	NNC	ENSG00000111602.12	novel	5158	29	NA	NA	-20	1444	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	311.650801735247	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGCCGTCTGATTTCTC	-56438824	True	NA	-5	True	AGTAAA	-24	NA	56449446	56414918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_56415069_56433837_56433927_56434073_56434232_56449309
transcript_33772.known	chr12	-	2387	18	FSM	ENSG00000135423.13	ENST00000311966.9	2387	18	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	13.0253944145265	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	-56487411	True	NA	-11	True	AATAAA	-18	NA	56488161	56470951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479051_56479182_56479779_56479902_56480287_56480388_56487936
transcript_33777.known	chr12	-	2225	17	FSM	ENSG00000135423.13	ENST00000424141.6	2225	17	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_14	21.2275616828688	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTAAACCCAGTCCT	-56487379	True	NA	-11	True	AATAAA	-18	NA	56488129	56470951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56471644_56471772_56471837_56472118_56472196_56472689_56472752_56473227_56473321_56473462_56473595_56474543_56474721_56474845_56474897_56475043_56475111_56475623_56475683_56475944_56475978_56477659_56477719_56477932_56478097_56478182_56478263_56479779_56479902_56480287_56480388_56487936
transcript_33788.known	chr12	-	859	3	FSM	ENSG00000135423.13	ENST00000471282.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTCCCAGAAGTAAATAT	-56488264	False	NA	NA	False	AATATA	-44	NA	56488362	56479568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56479902_56480287_56480388_56487936
transcript_33789.known	chr12	-	514	3	FSM	ENSG00000135423.13	ENST00000491880.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	39	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCTACTCAATCCCTG	-56487501	False	NA	NA	False	AATATA	-20	NA	56487599	56479592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56479902_56480287_56480388_56487494
transcript_33791.known	chr12	+	10769	2	FSM	ENSG00000176422.14	ENST00000338146.7	10769	2	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	0	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGCTCTGAGAGTCTAT	56467220	True	NA	NA	False	AATAAA	-39	NA	56468577	56479708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56468677_56469038
transcript_33795.known	chr12	+	8488	14	FSM	ENSG00000076067.13	ENST00000262031.10	8488	14	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	6.4450338663549	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTGGTGTTGATGGTGT	NA	False	NA	6	True	TATAAA	-33	NA	56521819	56596193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56522090_56562416_56562584_56568974_56569034_56569898_56569991_56571697_56571856_56581183_56581264_56581398_56581509_56581832_56581880_56582058_56582153_56586848_56586927_56587553_56587665_56588293_56588375_56588931_56589019_56589139
transcript_33799.nnic	chr12	+	825	3	NNC	ENSG00000076067.13	novel	552	6	NA	NA	10	-6275	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTCCTTGGGCCGGGCGT	NA	False	NA	NA	False	AATAAA	-27	NA	56521829	56563645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_56522090_56562416_56562584_56563247
transcript_33800.known	chr12	-	614	6	FSM	ENSG00000076108.12	ENST00000547650.1	614	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.0979809492094	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAAAATGAAGGAAAAGGA	-56610464	False	NA	5	True	AAAAAG	-24	NA	56610479	56605991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56606064_56606246_56606313_56606632_56606734_56609735_56609938_56610113_56610216_56610408
transcript_33819.known	chr12	-	1759	10	FSM	ENSG00000110955.9	ENST00000262030.8	1759	10	0	0	0	0	multi-exon	FALSE	canonical	3	3887	junction_7	546.434503547009	37027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	-56550394	True	NA	-4	True	AATAAA	-18	NA	56645984	56638174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56638424_56639105_56639308_56639979_56640193_56642457_56642581_56642672_56642832_56643402_56643588_56643836_56643959_56644780_56644956_56645170_56645354_56645836
transcript_33820.known	chr12	-	449	3	FSM	ENSG00000110955.9	ENST00000548474.2	449	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2692	719	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTGATTCTCTTGGTT	-56549689	False	95590	-4	True	AATAAA	-18	NA	56645279	56638174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56638424_56639105_56639197_56645170
transcript_33844.known	chr12	-	2939	8	FSM	ENSG00000110958.16	ENST00000537473.2	2939	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1499.57078212809	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGCATTTTGGCAGTTT	-56687987	False	52864	-8	True	AATAAA	-32	NA	56687997	56663340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56665631_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687249
transcript_33849.known	chr12	-	1898	8	FSM	ENSG00000110958.16	ENST00000262033.11	1898	8	0	0	0	0	multi-exon	FALSE	canonical	3	3235	junction_5	88.4044508991233	5027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGAACTTCTGCATTTT	-56635420	True	NA	-16	True	AATAAA	-24	NA	56688284	56663348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_33850.known	chr12	-	2077	9	FSM	ENSG00000110958.16	ENST00000614328.4	2077	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_7	1435.19658387797	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCTGCATTTTGGCAGT	-56688398	False	NA	-10	True	AATAAA	-30	NA	56688408	56663342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56686868_56686918_56687997
transcript_33851.known	chr12	-	1547	7	FSM	ENSG00000110958.16	ENST00000414274.7	1547	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	1215.61901241028	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTTGGAAGACTTCTTGG	-56635423	True	NA	13	True	TTTAAA	-22	NA	56688287	56663612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56666203_56666267_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_33852.known	chr12	-	1017	7	FSM	ENSG00000110958.16	ENST00000448157.6	1017	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	1228.30109636576	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTTCTTCATAACATAGA	-56635420	True	NA	4	True	AATAAA	-19	NA	56688284	56664166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56664499_56664775_56664801_56670274_56670365_56671748_56671848_56672739_56672810_56672951_56673066_56687997
transcript_33868.known	chr12	-	1074	8	FSM	ENSG00000196531.14	ENST00000552540.5	1074	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	3843.87445907679	8290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56633090	True	NA	-12	True	AATAAA	-20	NA	56725256	56712434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56724961
transcript_33869.known	chr12	-	964	8	FSM	ENSG00000196531.14	ENST00000546392.6	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_7	3739.08155261996	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTAACTGCAGCTTGGTTT	-56725501	False	NA	-27	True	NA	NA	NA	56725516	56712503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724550_56725262
transcript_33874.known	chr12	-	1107	7	FSM	ENSG00000196531.14	ENST00000678416.1	1107	7	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_6	4066.13426842854	4729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTGCCACAGATTTCCC	-56633103	True	NA	NA	False	NA	NA	NA	56725269	56712316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724961
transcript_33875.known	chr12	-	712	7	FSM	ENSG00000196531.14	ENST00000678376.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	4094.68373829612	6402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	-56633120	True	NA	-5	True	AATAAA	-27	NA	56725286	56712427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56725262
transcript_33880.known	chr12	+	1547	6	FSM	ENSG00000025423.11	ENST00000554150.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.82304288624318	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATCATTTGTTCTTGC	56752307	True	NA	NA	False	NA	NA	NA	56752452	56787576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752582_56763203_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_33881.known	chr12	+	1751	6	FSM	ENSG00000025423.11	ENST00000554643.5	1751	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.33757453113766	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTTGTCAGCAGTCTTT	56752303	True	NA	18	True	AATAAA	-23	NA	56752448	56787790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752582_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_33884.known	chr12	+	1525	5	FSM	ENSG00000025423.11	ENST00000555159.5	1525	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.44097150806707	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	56752097	True	NA	-36	True	AAGAAA	-27	NA	56752160	56787736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752319_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_3390.nic	chr1	+	773	3	NIC	ENSG00000142765.18	novel	793	4	NA	NA	139	0	intron_retention	FALSE	canonical	3	71	junction_1	4.5	436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGTGTCTGCTGGGGCA	27351170	False	NA	NA	False	AATAAA	-23	NA	27351213	27353937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_27351556_27353282_27353489_27353712
transcript_33905.known	chr12	-	2690	8	FSM	ENSG00000196531.14	ENST00000356769.7	2690	8	0	0	0	0	multi-exon	FALSE	canonical	3	7865	junction_7	1138.91036360485	57310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTCAGTCGGTGACTGGTC	NA	False	NA	-10	True	AATAAA	-22	NA	56727197	56712432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56725262
transcript_33906.known	chr12	-	1059	8	FSM	ENSG00000196531.14	ENST00000393891.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	1197	junction_7	3427.68182506451	12197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATTCAGTCGGTGACTGG	-56633101	True	NA	-12	True	AATAAA	-20	NA	56725267	56712434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56724451_56724524_56724961
transcript_33907.known	chr12	-	844	9	FSM	ENSG00000196531.14	ENST00000550920.6	844	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	4623.6874286115	6392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCGGTGACTGGTCTCTTC	-56633120	True	NA	-5	True	AATAAA	-27	NA	56725286	56712427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56712553_56712785_56712909_56713061_56713191_56713536_56713684_56714361_56714440_56714601_56714688_56719536_56719597_56724451_56724524_56725262
transcript_33908.known	chr12	-	1875	14	FSM	ENSG00000198056.15	ENST00000672280.1	1875	14	0	0	0	0	multi-exon	TRUE	canonical	2	16	junction_5	125.560377046358	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCCATCTCAAAAAAGAAACA	-56744978	True	NA	NA	False	NA	NA	NA	56752374	56731295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56740011_56740129_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_33909.known	chr12	-	1459	13	FSM	ENSG00000198056.15	ENST00000552590.6	1459	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	104.976452386026	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCCTTGAGAAATAATTTA	-56744977	True	NA	16	True	AATAAA	-42	NA	56752373	56731595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746180_56746776_56746855_56746925_56747033_56751037_56751196_56752195
transcript_33910.known	chr12	-	1423	13	FSM	ENSG00000198056.15	ENST00000338193.11	1423	13	0	0	0	0	multi-exon	FALSE	canonical	2	189	junction_9	63.4487435301563	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTGAAAAGATTTCC	-56744927	True	NA	32	True	AGTAAA	-18	NA	56752323	56731579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_56731735_56734146_56734246_56738433_56738526_56739293_56739364_56741434_56741577_56741745_56741838_56742986_56743097_56744064_56744124_56746044_56746182_56746780_56746855_56746925_56747033_56751037_56751196_56752195
transcript_33911.known	chr12	+	1722	6	FSM	ENSG00000025423.11	ENST00000555805.5	1722	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.63944442658207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGGGTCTGTATTATGGT	56752097	True	NA	-36	True	AAGAAA	-27	NA	56752160	56787736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_56752319_56763217_56763415_56773833_56774166_56781973_56782233_56784852_56785017_56787124
transcript_33912.known	chr12	-	930	8	FSM	ENSG00000166863.13	ENST00000357616.7	930	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.4926291781761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015871	True	NA	2	True	AATAAA	-18	NA	57016538	57009999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57010289_57012377_57012453_57012620_57012738_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_33915.known	chr12	-	804	7	FSM	ENSG00000166863.13	ENST00000458521.7	804	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	6.96219952473514	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015862	True	NA	2	True	AATAAA	-18	NA	57016529	57009999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_33916.nnic	chr12	-	856	7	NNC	ENSG00000166863.13	novel	930	8	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	17.8574603146385	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGGTGTGTGTGTTTA	-57015892	True	NA	2	True	AATAAA	-18	NA	57016559	57009999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_57010289_57012377_57012453_57012821_57012876_57013358_57013389_57013577_57013672_57015683_57015825_57016386
transcript_33918.known	chr12	-	731	6	FSM	ENSG00000166863.13	ENST00000441881.5	731	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.7402989370935	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATATGAATGATGTGGTG	-57015853	True	NA	-8	True	AATAAA	-8	NA	57016520	57010009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57010289_57012377_57012453_57013358_57013389_57013577_57013672_57015683_57015803_57016386
transcript_33919.known	chr12	-	5617	9	FSM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_5	25.298221281347	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGGTCTTTCTTAATG	-57073256	True	NA	-3	True	AATAAA	-14	NA	57078791	57055642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57060060_57060771_57060946_57063118_57063345_57064070_57064186_57064645_57064740_57069233_57069307_57070673_57070894_57072787_57072913_57078618
transcript_33920.nic	chr12	-	1471	4	ISM	ENSG00000166881.10	ENST00000300128.9	5617	9	0	12711	0	2320	5prime_fragment	FALSE	canonical	3	138	junction_1	22.4845626053867	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGTGTTTATTCATTTTT	-57073256	True	NA	NA	False	TTTAAA	-15	NA	57078791	57068353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_57069307_57070673_57070894_57072787_57072913_57078618
transcript_33926.known	chr12	-	3037	22	FSM	ENSG00000166888.12	ENST00000454075.7	3037	22	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_21	29.6208083996611	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCTTCCAGCACTGACT	-57108758	True	NA	NA	False	NA	NA	NA	57111374	57096364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57096762_57096849_57096979_57097067_57097134_57098504_57098598_57098791_57098903_57099014_57099079_57099293_57099441_57099766_57099904_57099995_57100091_57102289_57102497_57102828_57102922_57104463_57104587_57104725_57104814_57105150_57105340_57105467_57105600_57106190_57106340_57106527_57106581_57106692_57106832_57107230_57107315_57107604_57107744_57108162_57108300_57111109
transcript_33929.known	chr12	+	1693	7	FSM	ENSG00000123384.14	ENST00000553277.5	1693	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	11.7579760163048	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGTGTCAGACGCCTGA	57124052	True	NA	NA	False	AATAAA	-22	NA	57128492	57150059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57129032_57138458_57138582_57141373_57141512_57143678_57143799_57144971_57145101_57145226_57145491_57149679
transcript_3393.nnic	chr1	-	837	3	Antisense	novelGene_ENSG00000142765.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAGAAAGAATCCAAATGTT	-27350809	True	NA	NA	False	AATAAA	-15	NA	27351190	27329636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_27329935_27330473_27330603_27350780
transcript_33930.known	chr12	+	2491	7	FSM	ENSG00000166886.13	ENST00000300131.8	2491	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	4.87909372276815	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATGACCCCTGCCTTGAG	57088857	True	NA	20	True	AATAAA	-21	NA	57089113	57095476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57089355_57091124_57091999_57092447_57092582_57092916_57092969_57093062_57093196_57093406_57093599_57094611
transcript_33932.known	chr12	+	1904	12	FSM	ENSG00000182199.11	ENST00000557433.5	1904	12	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_4	334.793781353624	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205566	True	NA	34	True	AATAAA	-13	NA	57229758	57234726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231918_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33935.known	chr12	+	2006	12	FSM	ENSG00000182199.11	ENST00000414700.7	2006	12	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	325.806716519052	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205893	False	NA	34	True	AATAAA	-13	NA	57230085	57234726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57230245_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33939.known	chr12	+	2215	11	FSM	ENSG00000182199.11	ENST00000556825.5	2215	11	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_2	320.366352790052	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCTTCTGTTTGATCC	NA	False	NA	28	True	AATGAA	-16	NA	57229572	57234935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33941.known	chr12	+	1659	11	FSM	ENSG00000182199.11	ENST00000557348.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	441.736618359855	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCAAGAGCCAGGTATAGT	57205910	False	NA	-44	True	AATAGA	-45	NA	57230102	57234476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57230245_57230802_57231001_57231712_57231914_57232210_57232293_57232452_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_33945.known	chr12	-	1177	4	FSM	ENSG00000185633.11	ENST00000554503.6	943	4	-234	0	-234	0	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGCGCCTGCTAATCA	-57237252	False	NA	NA	False	AATACA	-21	NA	57237338	57234902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57235620_57235748_57235810_57236592_57236682_57237028
transcript_33948.known	chr12	-	701	1	FSM	ENSG00000276727.1	ENST00000617433.1	701	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGCCCCCTCTCCTTAC	-57230117	False	NA	NA	False	AAAACA	-22	NA	57230198	57229497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57229500_57230200
transcript_33949.known	chr12	+	1918	12	FSM	ENSG00000182199.11	ENST00000557487.5	1918	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	340.277548359211	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTTTCCATTACTGTG	57205518	True	NA	34	True	AATAAA	-13	NA	57229710	57234726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57229812_57230802_57231001_57231480_57231561_57231712_57231914_57232210_57232293_57232482_57232576_57232703_57232844_57233179_57233346_57233562_57233663_57233748_57233905_57234002_57234111_57234233
transcript_3395.known	chr1	-	4438	29	FSM	ENSG00000142733.17	ENST00000357582.3	4438	29	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_16	13.364350614487	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCTGGCAATTTTG	-27366837	True	NA	-7	True	ATTAAA	-16	NA	27366961	27355183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240_27360369_27360704_27360839_27360920_27361009_27361156_27361253_27361345_27361396_27361519_27361628_27361704_27361868_27362090_27362251_27362640_27362754_27362850_27363022_27363441_27363549_27363916_27364086_27364203_27364395_27364660_27364685_27364772_27364913_27366257
transcript_33950.known	chr12	-	4092	24	FSM	ENSG00000179912.21	ENST00000634871.1	4092	24	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_21	24.0016540072776	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTGGACATCAGTC	-57430140	True	NA	-20	True	TATAAA	-9	NA	57430808	57253775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57255114_57255989_57256075_57256413_57256512_57257989_57258138_57258889_57259060_57266730_57266832_57268302_57268458_57268921_57269083_57269322_57269450_57269751_57269995_57280357_57280531_57283823_57284057_57289008_57289041_57295398_57295508_57296410_57296552_57297327_57297388_57298089_57298169_57299351_57299479_57300094_57300182_57303175_57303218_57305639_57305664_57310263_57310464_57395748_57395819_57430719
transcript_33953.known	chr12	-	1645	12	FSM	ENSG00000185482.8	ENST00000332782.7	1645	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_11	2.18938083250769	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGTTGTTATTTAACTG	-57251176	False	NA	-5	True	ATTAAA	-17	NA	57251187	57243457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57243911_57244087_57244226_57244314_57244367_57244536_57244623_57244915_57244966_57245144_57245212_57246803_57246902_57248125_57248199_57248705_57248804_57249040_57249309_57249570_57249638_57250992
transcript_33958.known	chr12	+	2797	21	FSM	ENSG00000166986.15	ENST00000262027.10	2797	21	0	0	0	0	multi-exon	FALSE	canonical	3	1315	junction_2	78.9716879647384	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGCTGAGACCTTTCCTTT	57468934	True	NA	12	True	AATAAA	-22	NA	57488067	57516652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57489895_57489972_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57515992_57516244_57516338_57516434
transcript_3396.nic	chr1	-	2058	14	ISM	ENSG00000142733.17	ENST00000493901.6	3654	27	4362	-24	2323	0	3prime_fragment	TRUE	canonical	3	30	junction_12	8.04646270917709	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCTGGCAATTTTG	-27360279	True	NA	-7	True	ATTAAA	-16	NA	27360406	27355183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_27355470_27355668_27355746_27356025_27356100_27356387_27356501_27356589_27356750_27357008_27357115_27357399_27357577_27357710_27357877_27358180_27358320_27358418_27358612_27358708_27358867_27359416_27359523_27359857_27359995_27360240
transcript_33971.known	chr12	+	2979	19	FSM	ENSG00000166986.15	ENST00000545888.6	2979	19	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	328.336886613599	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGACCTTTCCTTTTGT	57468932	True	NA	15	True	AATAAA	-25	NA	57488065	57516655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57488200_57489018_57489110_57489266_57489346_57489423_57489559_57490206_57490380_57490537_57490645_57498156_57498274_57498419_57498624_57500320_57500523_57504224_57504300_57511697_57511869_57512007_57512104_57512235_57512354_57512750_57512965_57514719_57514852_57514953_57515059_57515149_57515337_57515919_57516338_57516434
transcript_33975.known	chr12	-	1439	16	FSM	ENSG00000175203.17	ENST00000549394.5	1439	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	213.663494516234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTACTATAACTCTAG	-57539579	True	NA	NA	False	NA	NA	NA	57547120	57530616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538252_57538348_57541363_57541373_57546027_57546097_57547027
transcript_33981.known	chr12	-	1705	15	FSM	ENSG00000175203.17	ENST00000543672.6	1705	15	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	184.105407363304	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	-57539636	True	NA	-3	True	ATTAAA	-17	NA	57547177	57530309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57538518_57538525_57546027_57546097_57547027
transcript_33985.known	chr12	-	1902	14	FSM	ENSG00000175203.17	ENST00000678521.1	1902	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	144.624508713807	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCCAGAGTTTCAAAATAT	-57539681	True	NA	-3	True	AATAAA	-18	NA	57547222	57530152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532808_57532979_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_33989.known	chr12	-	1677	13	FSM	ENSG00000175203.17	ENST00000678322.1	1677	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	146.740417063602	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCCTCTGCTGTGTTTCC	-57539683	True	NA	-3	True	ATTAAA	-17	NA	57547224	57530309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57547027
transcript_33992.known	chr12	-	1869	13	FSM	ENSG00000175203.17	ENST00000678505.1	1869	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	150.451450271803	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGTACAAAACAGAATTAAAA	-57539636	True	NA	76	True	NA	NA	NA	57547177	57530073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532212_57532316_57532571_57532644_57532732_57532811_57532983_57533023_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_33993.known	chr12	-	1527	13	FSM	ENSG00000175203.17	ENST00000550201.5	1527	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148.817188374044	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTACAACTGTTTCTGA	-57539611	True	NA	-47	True	NA	NA	NA	57547152	57530353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57530776_57532014_57532107_57532571_57532644_57532732_57532811_57532983_57533023_57533237_57533304_57533952_57534098_57534291_57534453_57535055_57535155_57535483_57535546_57535748_57535846_57546027_57546097_57547027
transcript_34001.known	chr12	-	1673	11	FSM	ENSG00000123329.20	ENST00000552953.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_10	5.88302643203309	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGCAGTTCCTTTATT	-57476617	False	NA	-8	True	CATAAA	-17	NA	57476641	57472263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57472689_57473602_57473709_57474041_57474177_57474422_57474477_57474625_57474704_57474874_57474974_57475290_57475399_57475482_57475616_57475832_57475932_57476070_57476455_57476589
transcript_3401.known	chr1	-	444	3	FSM	ENSG00000142733.17	ENST00000486046.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	25.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGTCCTGGCAATTTTG	-27356447	False	NA	-7	True	ATTAAA	-16	NA	27356471	27355183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27355470_27356025_27356100_27356387
transcript_34016.known	chr12	-	903	4	FSM	ENSG00000175197.13	ENST00000346473.8	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	11.5758369027902	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAAGGTCTTTTACTTTTT	-57520010	True	NA	-9	True	ATTAAA	-15	NA	57520514	57516592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57517181_57517268_57517439_57517705_57517754_57520417
transcript_34019.known	chr12	-	1067	4	FSM	ENSG00000175197.13	ENST00000551116.5	1067	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20.4178571081514	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTCTTTTACTTTTTCTTC	-57520013	True	NA	-5	True	ATTAAA	-19	NA	57520517	57516588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57517181_57517268_57517596_57517705_57517754_57520417
transcript_3402.nnic	chr1	-	855	7	NNC	ENSG00000174950.11	novel	946	6	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.61743318211757	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27382904	True	NA	-4	True	AATAAA	-17	NA	27383362	27379175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_27379312_27379431_27379510_27380050_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_34024.known	chr12	-	951	3	FSM	ENSG00000175197.13	ENST00000552740.5	951	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAATTGGGAGCATCAGTCC	-57520007	True	NA	NA	False	NA	NA	NA	57520511	57516808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57517181_57517268_57517754_57520417
transcript_34027.known	chr12	+	2460	2	FSM	ENSG00000139269.3	ENST00000266646.3	2460	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGTGTTACAGTCTT	57455006	True	NA	33	True	NA	NA	NA	57455306	57458025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57455835_57456093
transcript_34028.known	chr12	+	4202	13	FSM	ENSG00000166987.15	ENST00000355673.8	4202	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	15.6655584714437	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCTCTGTACTCATT	57522726	True	NA	11	True	NA	NA	NA	57522823	57530148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57523012_57524028_57524093_57524279_57524417_57524719_57524823_57524952_57525116_57525347_57526389_57526565_57527228_57527506_57527661_57527847_57528018_57528146_57528561_57528665_57528719_57528945_57529010_57529159
transcript_34029.known	chr12	+	3176	10	FSM	ENSG00000166908.18	ENST00000354947.10	3176	10	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_6	18.2452429112053	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTGTACAGAAATGCCTT	57587766	True	NA	10	True	AATAAA	-15	NA	57591191	57603418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57591464_57594024_57594123_57595125_57595223_57595887_57596032_57599064_57599212_57599399_57599439_57600323_57600438_57600810_57601079_57601244_57601349_57601525
transcript_3403.known	chr1	-	946	6	FSM	ENSG00000174950.11	ENST00000374030.3	946	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.60434577328853	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27382875	True	NA	-4	True	AATAAA	-17	NA	27383333	27379175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27379510_27380050_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_34036.nic	chr12	+	2659	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	-204	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	40.7171817404998	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	NA	False	NA	17	True	AATAAA	-23	NA	57604417	57609800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57605343_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_34038.known	chr12	+	2028	7	FSM	ENSG00000178498.16	ENST00000337737.8	2028	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	39.0828891232752	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCACACCCGTTCTTTT	57603058	True	NA	19	True	AATAAA	-25	NA	57604823	57609802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57604859_57605570_57605732_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_3404.known	chr1	-	1457	5	FSM	ENSG00000174950.11	ENST00000374027.7	1457	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3.34477204006491	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTCCTGTGTCTTGG	-27383281	False	NA	-4	True	AATAAA	-17	NA	27383303	27379175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27380196_27381779_27381825_27382327_27382400_27382499_27382668_27383151
transcript_34043.nic	chr12	+	1906	7	NIC	ENSG00000178498.16	novel	2028	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	53.429080720771	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57603058	True	NA	17	True	AATAAA	-23	NA	57604823	57609800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57605988_57606030_57606189_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_34047.known	chr12	+	1840	6	FSM	ENSG00000178498.16	ENST00000551632.1	1840	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	52.3121400823939	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACACCCGTTCTTTTCC	57603068	True	NA	21	True	AATAAA	-27	NA	57604833	57609804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57604859_57606189_57606253_57606442_57606519_57606883_57607614_57608519_57608738_57609076
transcript_34048.nic	chr12	+	2069	6	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	-3	0	intron_retention	FALSE	canonical	3	8	junction_1	48.7868834831658	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATGCCACACCCGTTCTT	57603055	True	NA	17	True	AATAAA	-23	NA	57604820	57609800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57605988_57606253_57606442_57606519_57606864_57607614_57608519_57608738_57609076
transcript_3405.known	chr1	+	2137	2	FSM	ENSG00000181773.7	ENST00000374024.4	2137	2	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTATGTGTGTG	27391690	True	NA	NA	False	AATAAA	-19	NA	27392621	27395814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27392738_27393793
transcript_34056.nnic	chr12	+	1057	4	NIC	ENSG00000178498.16	novel	2067	6	NA	NA	23	-3	combination_of_known_splicesites	FALSE	canonical	3	9	junction_3	61.2662676809642	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTATGCCACACCCGTT	57604639	False	NA	14	True	AATAAA	-20	NA	57604661	57609797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_57604859_57606189_57606253_57606442_57606519_57609076
transcript_3406.nic	chr1	-	779	5	ISM	ENSG00000158195.11	ENST00000536657.1	1083	8	-133	7788	-17	-7788	5prime_fragment	FALSE	canonical	3	523	junction_2	27.8298401001515	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGGGGAAAGGGGCCTCT	-27477740	True	NA	0	True	NA	NA	NA	27490184	27415984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_34061.known	chr12	+	2091	15	FSM	ENSG00000135506.16	ENST00000389146.10	2091	15	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	126.500060498493	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACCTCTCGGGCAAC	57687156	True	NA	NA	False	NA	NA	NA	57694144	57721024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_34062.known	chr12	+	2682	15	FSM	ENSG00000135506.16	ENST00000315970.12	2682	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	170.349296015749	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687143	True	NA	19	True	AATAAA	-16	NA	57694131	57721557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720098_57720264_57720405_57720519_57720783
transcript_34065.known	chr12	+	2457	14	FSM	ENSG00000135506.16	ENST00000389142.9	2457	14	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_11	110.777563789123	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCAACCTTTTTTGTGG	57687158	True	NA	19	True	AATAAA	-16	NA	57694146	57721557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716091_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718377_57718992_57719183_57720405_57720519_57720783
transcript_34066.known	chr12	+	2505	14	FSM	ENSG00000135506.16	ENST00000257966.12	2505	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	186.994098568399	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCATCAACCTTTTTTGT	57687156	True	NA	17	True	AATAAA	-14	NA	57694144	57721555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57694324_57694749_57694927_57695779_57695844_57695961_57696039_57696274_57696374_57715759_57715971_57716088_57716194_57716411_57716513_57716692_57716745_57717869_57717959_57718145_57718422_57718992_57719183_57720405_57720519_57720783
transcript_3407.known	chr1	-	5681	9	FSM	ENSG00000158195.11	ENST00000618852.5	5681	9	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	50.2792203599061	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTCTGGTGTTTGTGG	-27477723	True	NA	-6	True	GATAAA	-18	NA	27490167	27404229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27408347_27409691_27410207_27412571_27412728_27414832_27414964_27415984_27416103_27418268_27418423_27418953_27419089_27428760_27428934_27489985
transcript_34087.known	chr12	-	776	7	FSM	ENSG00000135446.17	ENST00000546489.5	776	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	460.520870560958	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATCTCTGCCTTTCGAGC	-57730199	True	NA	NA	False	NA	NA	NA	57752322	57748590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57752174
transcript_34091.known	chr12	+	1100	6	FSM	ENSG00000135452.10	ENST00000549052.5	1100	6	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	70.2839953332194	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCAAGAACTCTTTCCT	57743196	True	NA	NA	False	NA	NA	NA	57745049	57747656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745218_57745744_57745913_57746175_57746257_57746592_57746721_57747017_57747132_57747215
transcript_34106.known	chr12	+	582	5	FSM	ENSG00000135452.10	ENST00000552816.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	80.8590594800607	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGAGCCCCACATGCC	57743185	True	NA	NA	False	NA	NA	NA	57745038	57747025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745232_57745744_57745913_57746175_57746257_57746588_57746721_57747017
transcript_34108.known	chr12	+	488	5	FSM	ENSG00000135452.10	ENST00000548167.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	73.5153045290571	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCATTCAGACGAAGCC	57745274	True	NA	NA	False	NA	NA	NA	57745381	57747066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745440_57745744_57745913_57746175_57746257_57746588_57746721_57747017
transcript_34112.known	chr12	+	475	4	FSM	ENSG00000135452.10	ENST00000547472.5	475	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	83.973540806349	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGATCCTTCTGACTTT	57743212	True	NA	NA	False	NA	NA	NA	57745065	57747292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57745218_57746588_57746721_57747017_57747132_57747215
transcript_34116.known	chr12	-	558	4	FSM	ENSG00000135446.17	ENST00000549606.5	558	4	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_3	629.762036186862	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTCCATCTTTCTACAGA	-57730230	True	NA	NA	False	NA	NA	NA	57752353	57748425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57752174
transcript_34119.known	chr12	+	1500	2	FSM	ENSG00000255737.2	ENST00000542466.2	1500	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCCACATTTTGCGCTTG	57726158	True	NA	16	True	TATAAA	-28	NA	57726270	57728356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57726379_57726964
transcript_34120.known	chr12	-	1865	8	FSM	ENSG00000135446.17	ENST00000257904.11	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_5	44.5114064720769	1081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTTATATTCGCTA	-57730187	True	NA	NA	False	AATATA	-15	NA	57752310	57747726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57748618_57749181_57749318_57749453_57749505_57750655_57750766_57750922_57751091_57751206_57751343_57751499_57751737_57752174
transcript_34127.known	chr12	+	2246	7	FSM	ENSG00000257921.6	ENST00000651284.1	2246	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	212.950437634885	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACATAAAGTTATTAAACAT	57772519	False	NA	-17	True	AAAACA	-25	NA	57772659	57797554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57772902_57773016_57773129_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_34139.known	chr12	+	689	6	FSM	ENSG00000123297.20	ENST00000457189.1	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	184.536825593159	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAATGCAGAGTCCCTCAC	57777774	True	NA	NA	False	NA	NA	NA	57782817	57796261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782908_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_34144.known	chr12	-	1378	6	FSM	ENSG00000037897.17	ENST00000324871.12	1378	6	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_4	23.004347415217	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTGTCTCTGGAGAGTCC	-57768289	True	NA	88	True	NA	NA	NA	57772105	57768470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57769771_57769957_57771093_57771258_57771973
transcript_34161.known	chr12	-	1096	5	FSM	ENSG00000037897.17	ENST00000257848.7	1096	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	110.907619215273	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTATTCTGCCATTTCTC	-57768303	True	NA	-23	True	NA	NA	NA	57772119	57768581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57769152_57769302_57769405_57769564_57769679_57771093_57771258_57771973
transcript_34185.known	chr12	-	726	3	FSM	ENSG00000037897.17	ENST00000547653.1	726	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	143.5	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACCACTTCTGTTTGCT	-57765839	False	NA	-7	True	NA	NA	NA	57769655	57768637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57769152_57769302_57769424_57769564
transcript_34186.known	chr12	+	1997	6	FSM	ENSG00000123297.20	ENST00000652027.2	1997	6	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	27.2132320755915	1413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGTTCTCTTTCTTTTG	57777743	True	NA	16	True	ATTAAA	-32	NA	57782786	57797587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57792985_57793074_57796176
transcript_34187.known	chr12	+	1085	5	FSM	ENSG00000123297.20	ENST00000651899.1	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	235.990465909113	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAATACTGGATTTAGCTT	57777732	True	NA	19	True	AATAAA	-21	NA	57782775	57796733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782878_57783109_57783284_57786162_57786292_57787039_57787163_57796176
transcript_34188.known	chr12	+	1218	7	FSM	ENSG00000123297.20	ENST00000323833.12	1218	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	214.433685682907	579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATACTGGATTTAGCTTT	57777732	True	NA	20	True	AATAAA	-22	NA	57782775	57796734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57782859_57783109_57783284_57786162_57786292_57787039_57787163_57791964_57792028_57792985_57793074_57796176
transcript_34189.known	chr12	-	4785	8	FSM	ENSG00000175215.11	ENST00000398073.7	4785	8	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	21.7827866885384	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGCTGCCACCAACCTT	-57841223	True	NA	-4	True	AATAAA	-28	NA	57846729	57819926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57823728_57823903_57824090_57824226_57824320_57826345_57826403_57826995_57827098_57827551_57827591_57829447_57829597_57846371
transcript_34191.known	chr12	+	610	2	FSM	ENSG00000257953.1	ENST00000549683.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGGCAGGAGGAGGAGCC	57837066	True	NA	NA	False	NA	NA	NA	57837091	57842745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57837215_57842258
transcript_34192.nnic	chr12	+	324	2	Antisense	novelGene_ENSG00000245651.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGTCTCAGTAAAATGG	57852691	True	NA	NA	False	AATAAA	-19	NA	57852733	57890522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_57852848_57890312
transcript_34194.known	chr12	-	1720	2	FSM	ENSG00000245651.3	ENST00000667552.1	1720	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGAGATAGTCAACTGCCA	-57894906	False	NA	NA	False	AATAAA	-31	NA	57894919	57892988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57893529_57893739
transcript_34199.known	chr12	+	3134	6	FSM	ENSG00000166896.9	ENST00000300145.4	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.19444229944198	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGACAAGGTCTTCAAATT	NA	False	NA	NA	False	AATAGA	-34	NA	57941566	57959148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57941889_57945627_57945674_57946994_57947077_57951757_57951896_57953605_57953690_57956686
transcript_3420.known	chr1	-	828	5	FSM	ENSG00000126709.16	ENST00000362020.4	828	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	9.65336728815391	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTGTCCTGCTGTCAAT	-27671400	True	NA	-5	True	AATAAA	-15	NA	27672198	27666065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27666476_27668225_27668376_27668457_27668536_27669232_27669347_27672122
transcript_34208.known	chr12	+	519	4	FSM	ENSG00000166896.9	ENST00000549257.5	519	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	35.3553390593274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACAATGACATTTTTATAT	NA	False	NA	NA	False	AATATA	-4	NA	57941795	57956890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_57941889_57951757_57951896_57953605_57953690_57956686
transcript_3421.known	chr1	-	441	2	FSM	ENSG00000233975.2	ENST00000440492.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTGCATTTCTTAGAGC	-27661924	False	NA	NA	False	GATAAA	-44	NA	27662722	27660327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27660723_27662676
transcript_34210.known	chr12	-	495	4	FSM	ENSG00000257698.3	ENST00000667438.1	495	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	43.5660418215839	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57936175	57931527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935554_57935838_57935915_57936050
transcript_34212.known	chr12	-	986	3	FSM	ENSG00000257698.3	ENST00000653595.1	986	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGAATTCATAAAAGGAAAT	NA	False	NA	NA	False	AAGAAA	-2	NA	57936155	57931227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935394_57935554_57935838
transcript_34213.known	chr12	-	803	3	FSM	ENSG00000257698.3	ENST00000546580.2	803	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57936175	57931527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935297_57935554_57935838
transcript_34214.known	chr12	-	672	3	FSM	ENSG00000257698.3	ENST00000664635.1	672	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52	531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACATTTCTTTTTTTCTC	NA	False	NA	71	True	ATTAAA	-1	NA	57936122	57931452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935573_57935838
transcript_34217.known	chr12	-	894	3	FSM	ENSG00000257698.3	ENST00000668073.1	894	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACTAAACAGAATTACTC	NA	False	NA	NA	False	NA	NA	NA	57936166	57931294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935469_57935593_57935838
transcript_34218.known	chr12	-	451	2	FSM	ENSG00000257698.3	ENST00000551421.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACCTTGGGTTTTACCTG	NA	False	NA	-4	True	AATAAA	-14	NA	57936079	57931527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_57931738_57935838
transcript_3422.known	chr1	-	935	1	FSM	ENSG00000287244.1	ENST00000662905.1	935	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTGCTTCCTTGTAGG	NA	False	NA	NA	False	NA	NA	NA	27725756	27724821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27724800_27725800
transcript_34222.nnic	chr12	+	664	4	NNC	ENSG00000286351.2	novel	413	3	NA	NA	-136	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.88561808316413	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	59102007	59130875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_59102224_59113489_59113609_59119717_59119823_59130651
transcript_34224.nnic	chr12	+	600	4	NNC	ENSG00000286351.2	novel	423	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.63299316185545	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	59102093	59130875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_59102224_59113489_59113609_59119717_59119845_59130651
transcript_34227.nnic	chr12	+	546	3	FSM	ENSG00000286351.2	ENST00000690337.1	413	3	-137	4	-137	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	ATTAAA	-16	NA	59102006	59130875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_59102224_59119717_59119823_59130651
transcript_3425.known	chr1	+	3579	9	FSM	ENSG00000009780.16	ENST00000373954.11	3579	9	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_5	6.85565460040104	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAATTGTTGGATTTTGT	27725543	True	NA	8	True	AATAAA	-18	NA	27725960	27763116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525_27759628_27760494
transcript_34253.nnic	chr12	-	1315	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_2	46	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	-59297187	True	NA	-1	True	AGTAAA	-20	NA	59328609	59320075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59326402_59326562_59328356
transcript_3426.known	chr1	+	1027	8	FSM	ENSG00000009780.16	ENST00000530324.5	1027	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	6.98394660661732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTTTTTTTGTTTTT	27725610	True	NA	NA	False	NA	NA	NA	27726027	27759764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27749067_27749155_27755194_27755331_27759525
transcript_34264.nnic	chr12	-	616	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_2	15	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-59328600	False	NA	-9	True	AATAAA	-13	NA	59328610	59321923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59322184_59326402_59326505_59328356
transcript_34266.nnic	chr12	-	672	3	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	41	junction_2	9.5	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCACAGTCTTTTTTATTTG	-59297187	True	NA	-9	True	AATAAA	-13	NA	59328609	59321923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59322184_59326402_59326562_59328356
transcript_34274.nnic	chr12	-	1806	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	127	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCATGTGTGCTTTCTTTCT	NA	False	NA	0	True	AATATA	-26	NA	59328739	59319555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_34277.nnic	chr12	-	1286	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	146	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTGTCCCTAATGGCCTC	NA	False	NA	-1	True	AGTAAA	-20	NA	59328739	59320075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_34279.nnic	chr12	-	1086	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACCAACTCTTAATGTCAT	-59328600	False	NA	-16	True	ATTAAA	-24	NA	59328610	59320146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_3428.known	chr1	+	2273	8	FSM	ENSG00000009780.16	ENST00000373949.5	2273	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	9.72268544409918	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAGGAA	27725610	True	NA	NA	False	NA	NA	NA	27726027	27761964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27744653_27744812_27755194_27755331_27759525_27759628_27760494
transcript_34281.nnic	chr12	-	597	2	Antisense	novelGene_ENSG00000286279.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	51	junction_1	0	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCAAGATAGCCTTTTC	-59297187	True	NA	-24	True	TATAAA	-16	NA	59328609	59320634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_59320979_59328356
transcript_34283.known	chr12	+	11936	6	FSM	ENSG00000118596.12	ENST00000547379.6	11936	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	1.93907194296653	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGAAATGAAATCTATA	59595826	True	NA	NA	False	AATAAA	-16	NA	59596028	59789841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_59596237_59655151_59655251_59704771_59705019_59771218_59771363_59774656_59775476_59779422
transcript_34284.nic	chr12	-	530	3	NIC	ENSG00000198673.11	novel	427	2	NA	NA	-83	61	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	1	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGATCCGTTTTACT	NA	False	NA	NA	False	ATTAAA	-15	NA	62260253	62255103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_62255315_62258762_62258843_62260014
transcript_34286.nic	chr12	-	541	3	NIC	ENSG00000198673.11	novel	427	2	NA	NA	-26	61	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGATCCGTTTTACT	-62260100	True	NA	NA	False	ATTAAA	-15	NA	62260196	62255103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_62255315_62258762_62258911_62260014
transcript_34288.known	chr12	+	14971	22	FSM	ENSG00000135655.16	ENST00000280377.10	14971	22	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_7	32.2262410504995	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	62256255	True	NA	NA	False	ATTAAA	-15	NA	62260403	62416389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62349220_62349308_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_34294.known	chr12	+	14950	21	FSM	ENSG00000135655.16	ENST00000353364.7	14950	21	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	30.9845122601599	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGCTTTATTGTGTT	62256189	True	NA	NA	False	ATTAAA	-15	NA	62260337	62416389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62355330_62355476_62381489_62381664_62383839_62383999_62384077_62384303_62389430_62389515_62389604_62389700_62389796_62389989_62390863_62390980_62391156_62391430_62391815_62391887_62392271_62392388_62393052_62393203_62396294_62396399_62401186_62401276_62404192
transcript_3430.nnic	chr1	+	1135	5	NNC	ENSG00000009780.16	novel	1027	8	NA	NA	10	-19916	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	14.9415527974839	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCTATGGTACAGAGTTT	27725553	True	NA	NA	False	AATAAA	-23	NA	27725970	27739848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_27726162_27727471_27727537_27732602_27732658_27734030_27734184_27739177
transcript_34300.known	chr12	+	2226	7	FSM	ENSG00000135655.16	ENST00000312635.10	2226	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	58.6138493304555	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTTTTTTATTTTTGA	62256248	True	NA	NA	False	AATAAA	-15	NA	62260396	62336690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871_62325934_62335165
transcript_34303.nic	chr12	+	1040	6	ISM	ENSG00000135655.16	ENST00000549237.5	791	7	-72	1550	0	298	5prime_fragment	FALSE	canonical	3	155	junction_4	9.89141041510259	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTTCGTGGTTTTTAAA	62256207	True	NA	NA	False	ATTAAA	-21	NA	62260355	62326231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789_62314917_62321463_62321610_62325871
transcript_34304.known	chr12	+	584	6	FSM	ENSG00000135655.16	ENST00000549523.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	85.155387380952	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTTCAGTATTCCAGATGA	62256207	True	NA	23	True	AAGAAA	-2	NA	62260355	62321489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62312285_62312310_62314789_62314917_62321463
transcript_34305.known	chr12	+	579	4	FSM	ENSG00000135655.16	ENST00000537297.2	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	84.1704619606348	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTAATAATATGGAAAT	62256259	True	NA	NA	False	ATTAAA	-21	NA	62260407	62304896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62304672
transcript_34306.known	chr12	+	648	4	FSM	ENSG00000135655.16	ENST00000548524.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	4.08248290463863	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTCTTGTATGCTTTTG	62256250	True	NA	NA	False	NA	NA	NA	62260398	62315073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789_62302921_62314789
transcript_34307.known	chr12	+	1022	3	FSM	ENSG00000135655.16	ENST00000551206.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTCCCCCGACCCTCC	62256258	True	NA	NA	False	NA	NA	NA	62260406	62303586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62260504_62294178_62294307_62302789
transcript_34308.nic	chr12	+	2184	8	ISM	ENSG00000061987.16	ENST00000552115.5	3760	24	-42	44086	-10	134	5prime_fragment	TRUE	canonical	3	51	junction_7	9.94064014692275	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTATTTTTAGTAG	62463103	True	NA	NA	False	NA	NA	NA	62466806	62509279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285
transcript_34310.known	chr12	+	10382	36	FSM	ENSG00000061987.16	ENST00000641654.1	10382	36	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	35.3027720481794	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCCTACTGTCTTTATG	62463113	True	NA	8	True	AATAAA	-16	NA	62466816	62597583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62467319_62484169_62484234_62493914_62494043_62495015_62495148_62498918_62499049_62500782_62500881_62501572_62501699_62508285_62508481_62524514_62524640_62525083_62525221_62525948_62526103_62532437_62532671_62534844_62534927_62535524_62535710_62537150_62537264_62537601_62537707_62538095_62538177_62538251_62538326_62538414_62538506_62543096_62543199_62544765_62544769_62544897_62545009_62546896_62547073_62549667_62549831_62552880_62553175_62555993_62556193_62560490_62561114_62565236_62565381_62566013_62566032_62566321_62566451_62571391_62571583_62578444_62578506_62580296_62580421_62585293_62585502_62588073_62588157_62592585
transcript_34311.nic	chr12	+	623	2	ISM	ENSG00000061987.16	ENST00000549286.1	424	4	-255	9656	-10	-9656	5prime_fragment	FALSE	canonical	3	81	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTAAAAGTAGAATCTTTA	62463103	True	NA	NA	False	AATAAA	-16	NA	62466806	62484280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_62467319_62484169
transcript_34312.known	chr12	-	1940	1	FSM	ENSG00000221949.6	ENST00000408887.3	1940	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTCTATTCTACAT	NA	False	NA	NA	False	ATTAAA	-16	NA	62603690	62601750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_62601800_62603700
transcript_34313.known	chr12	+	491	1	FSM	ENSG00000275180.1	ENST00000619323.1	491	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTGAATGGTTTTGTTT	62603750	False	NA	2	True	AATAAA	-15	NA	62603908	62604399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62603900_62604400
transcript_34314.known	chr12	+	645	1	FSM	ENSG00000139239.7	ENST00000484568.1	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1369	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGGCAATCATAAAAAG	62964822	True	NA	NA	False	AAGAAA	-4	NA	62965324	62965969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_62965300_62966000
transcript_34323.known	chr12	-	3976	22	FSM	ENSG00000177990.12	ENST00000324472.9	3976	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	11.651009902409	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTGTAAATTATTTTG	-63668308	True	NA	NA	False	AATAAA	-16	NA	63668493	63558912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_63560663_63569223_63569350_63570757_63570858_63580661_63580837_63582405_63582526_63583811_63583837_63594086_63594134_63595965_63596038_63597808_63597911_63600305_63600387_63608615_63608676_63617303_63617391_63618150_63618229_63621237_63621338_63624039_63624132_63626468_63626527_63644402_63644497_63647244_63647366_63661343_63661482_63663757_63663846_63665834_63665860_63668056
transcript_34324.known	chr12	+	1599	7	FSM	ENSG00000118600.13	ENST00000543342.5	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	42.8385210866212	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGCTAACATGTGATTTT	63778330	True	NA	7	True	AATAAA	-15	NA	63779865	63809100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_63780130_63781018_63781175_63782540_63782705_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_3433.known	chr1	+	3034	9	FSM	ENSG00000117758.14	ENST00000373943.9	3034	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	8.09224165481976	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCTTATCTGTGCCTTG	27771571	True	NA	12	True	AATAAA	-14	NA	27773218	27824443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677_27801816_27810245_27810290_27812162_27812269_27817850_27817924_27819649_27819733_27822230
transcript_34332.known	chr12	+	1854	6	FSM	ENSG00000118600.13	ENST00000261234.11	1854	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	8.26075057122535	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGAGGTTTAATTGGCT	63778373	True	NA	90	True	AATAAA	-26	NA	63779908	63809562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_63780130_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_34333.known	chr12	+	1966	6	FSM	ENSG00000118600.13	ENST00000537373.6	1966	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4014084157811	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGAGAGGTTTAATT	63779904	True	NA	86	True	AATAAA	-22	NA	63780125	63809558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_63780463_63781018_63781175_63784969_63785073_63802090_63802406_63805233_63805405_63808674
transcript_34339.known	chr12	+	360	2	FSM	ENSG00000196935.9	ENST00000542381.1	360	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATTTCGTTGATTGGAA	NA	False	NA	9	True	ATTAAA	-17	NA	64042793	64043627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64042973_64043446
transcript_34340.known	chr12	-	2698	4	FSM	ENSG00000174206.13	ENST00000311915.12	2698	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	21.6384431561566	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATAGATGTAAGTGTTTTT	-64221176	True	NA	NA	False	ATTAAA	-15	NA	64222265	64186315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64187653_64193846_64194659_64215677_64215964_64222002
transcript_34341.known	chr12	-	4159	3	FSM	ENSG00000174206.13	ENST00000398055.8	4159	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	13	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGCAGACTGCTTTCT	-64221207	True	NA	-8	True	ATTAAA	-17	NA	64222296	64191079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64194659_64215677_64215964_64222002
transcript_34344.known	chr12	-	574	1	FSM	ENSG00000174206.13	ENST00000615991.1	574	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTCTTCATTGTTTTAA	-64221183	True	NA	NA	False	CATAAA	-17	NA	64222272	64221698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64221700_64222300
transcript_34345.known	chr12	-	2441	3	FSM	ENSG00000174206.13	ENST00000544871.1	2441	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTTGTTACTGGTTTGA	-64221207	True	NA	-3	True	AATAAA	-20	NA	64222296	64192638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64194659_64215677_64215964_64222161
transcript_34346.nnic	chr12	+	875	3	NNC	ENSG00000243024.7	novel	1565	5	NA	NA	-333	-167759	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0.5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGAGTTGGGAATTC	64221934	False	NA	NA	False	AATAAA	-23	NA	64221999	64229238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_64222544_64227873_64227986_64229019
transcript_34347.known	chr12	-	4483	13	FSM	ENSG00000185306.13	ENST00000543942.7	4483	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	10.8969287212295	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTCTCTGCTGTGTGGTT	-64390202	True	NA	NA	False	NA	NA	NA	64390758	64264761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64284663_64284754_64285953_64286061_64303634_64303780_64312678_64312753_64318574_64318981_64330959_64331033_64352893_64353057_64390313
transcript_34352.known	chr12	-	1059	8	FSM	ENSG00000185306.13	ENST00000536975.5	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	9.84782167977948	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293199	True	NA	NA	False	AATAAA	-16	NA	64293383	64266982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64277679_64277804_64284663_64284754_64285953_64286061_64293280
transcript_34356.known	chr12	-	935	7	FSM	ENSG00000185306.13	ENST00000542397.5	935	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	6.40312423743285	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	-64293199	True	NA	NA	False	AATAAA	-16	NA	64293383	64266982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64267289_64270535_64270715_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_34363.nnic	chr12	-	776	6	NIC	ENSG00000185306.13	novel	935	7	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	9.52050418832953	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGCAAAGATCTTTATGC	NA	False	NA	NA	False	AATAAA	-16	NA	64293403	64266982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_64267289_64274900_64274976_64275297_64275373_64284663_64284754_64285953_64286061_64293280
transcript_34370.known	chr12	+	6370	25	FSM	ENSG00000184575.12	ENST00000332707.10	6370	25	0	0	0	0	multi-exon	FALSE	canonical	1	334	junction_6	176.34010206763	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTAGAGTGGACTTTTG	64391505	True	NA	15	True	AATAAA	-20	NA	64404391	64451125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64404805_64409961_64410096_64414906_64414990_64416697_64416755_64418045_64418116_64418875_64419095_64420069_64420255_64420352_64420522_64421234_64421472_64423004_64423044_64423181_64423245_64424598_64424724_64425037_64425183_64425337_64425458_64425814_64425910_64428050_64428121_64430048_64430288_64431537_64431824_64433413_64433604_64434506_64434624_64434793_64434910_64435626_64435675_64439243_64439316_64445074_64445132_64448104
transcript_34374.known	chr12	+	1075	2	FSM	ENSG00000183735.11	ENST00000679065.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTTTGTTTAGATTCAAT	64448468	True	NA	NA	False	ATTAAA	-14	NA	64452128	64456855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839
transcript_34375.known	chr12	+	3022	21	FSM	ENSG00000183735.11	ENST00000331710.10	3022	21	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_12	14.2302494707577	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTCATGTGTTTCTTTGT	64448459	True	NA	15	True	AATAAA	-21	NA	64452119	64502114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_34376.known	chr12	+	1261	4	FSM	ENSG00000183735.11	ENST00000678430.1	1261	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	13.8804418757713	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGGCAAGAATATGGAG	64448459	True	NA	NA	False	AAAACA	-2	NA	64452119	64465267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333
transcript_34377.known	chr12	+	3108	22	FSM	ENSG00000183735.11	ENST00000677499.1	3108	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	69.4312168808168	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	64448429	True	NA	-33	True	NA	NA	NA	64452089	64502066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64495981_64496090_64496366_64496407_64496948_64497051_64497166_64497260_64497647_64497755_64497967_64498040_64501329
transcript_34378.known	chr12	+	2956	21	FSM	ENSG00000183735.11	ENST00000676912.1	2956	21	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	44.2295150323853	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTTAATGTAAAGAGTTC	64448453	True	NA	1	True	AATAAA	-7	NA	64452113	64502100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460246_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64488486_64488589_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_34379.known	chr12	+	2869	20	FSM	ENSG00000183735.11	ENST00000678180.1	2869	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	46.8811191758479	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTACTATTTCATGGAAA	64448462	True	NA	-33	True	NA	NA	NA	64452122	64502066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_64452188_64455839_64455958_64460188_64460330_64464333_64464464_64466900_64467083_64474229_64474391_64480011_64480123_64481841_64482022_64484302_64484500_64485454_64485514_64485925_64486018_64490040_64490120_64495482_64495605_64495698_64495776_64496366_64496407_64496948_64497051_64497162_64497260_64497647_64497755_64497967_64498040_64501329
transcript_34380.known	chr12	-	254	2	FSM	ENSG00000256670.1	ENST00000546135.1	254	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGCTTGAGATTTAACC	-64609443	False	NA	NA	False	AATAAA	-16	NA	64609459	64599077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_64599217_64609344
transcript_34382.nic	chr12	+	788	4	NIC	ENSG00000111490.15	novel	5320	14	NA	NA	-12	108	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	1.4142135623731	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATATGGTCAATATCA	64759408	True	NA	2	True	AATAAA	-16	NA	64759471	64818878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_64759650_64785880_64786046_64787359_64787382_64818455
transcript_34390.known	chr12	-	1977	10	FSM	ENSG00000156076.10	ENST00000286574.9	1977	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.31476308670584	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTGGAGGTGATCT	-65121185	False	NA	NA	False	AATAAA	-22	NA	65121305	65050625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_65051471_65055117_65055214_65056030_65056127_65062480_65062577_65066640_65066737_65067694_65067791_65068763_65068905_65077745_65077855_65120416_65120557_65121043
transcript_34393.known	chr12	+	4377	7	FSM	ENSG00000174099.12	ENST00000308259.10	4377	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	65278592	True	NA	NA	False	AATAAA	-18	NA	65278682	65466907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65278866_65308528_65308656_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_34394.known	chr12	+	4290	6	FSM	ENSG00000174099.12	ENST00000355192.8	4290	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.78885438199983	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTCTTTGATTCCTGA	NA	False	NA	NA	False	AATAAA	-18	NA	65278642	65466907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65278866_65326825_65326935_65328525_65328604_65368997_65369027_65453727_65453826_65463154
transcript_34396.known	chr12	+	611	5	FSM	ENSG00000149948.14	ENST00000393577.7	611	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.256095748383	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTTCATTGCTGCTCCC	65812874	False	NA	NA	False	AATAAA	-23	NA	65825122	65952536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_65825382_65828000_65828088_65838518_65838570_65951382_65951416_65952355
transcript_34398.known	chr12	-	1023	1	FSM	ENSG00000241749.4	ENST00000622976.1	1023	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGTCTCCATGCGTTCT	NA	False	NA	NA	False	AAAAAG	-10	NA	65826997	65825974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_65826000_65827000
transcript_34404.known	chr12	-	989	8	FSM	ENSG00000155957.19	ENST00000286424.12	989	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	286.59549820581	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATACTGTTACAATCT	-66164642	True	NA	-23	True	AATAAA	-14	NA	66169962	66137839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66160164_66160306_66169854
transcript_34406.known	chr12	-	1303	8	FSM	ENSG00000155957.19	ENST00000545407.5	1303	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	283.029240574906	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAATACTGTTACAAT	-66164660	True	NA	-25	True	AATAAA	-12	NA	66169980	66137841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914_66169354_66169854
transcript_34409.known	chr12	-	770	7	FSM	ENSG00000155957.19	ENST00000542724.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	239.275817137183	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAATGAGAAAAAAGGATT	-66164679	True	NA	-103	True	ATTAAA	-36	NA	66169999	66137919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138735_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_3441.known	chr1	+	703	4	FSM	ENSG00000117758.14	ENST00000468761.1	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	4.10960933531265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTCATTTTGATATAT	27771607	True	NA	NA	False	AATGAA	-38	NA	27773254	27802039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27773426_27789561_27789632_27793532_27793633_27801677
transcript_34410.known	chr12	-	876	7	FSM	ENSG00000155957.19	ENST00000633367.1	876	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	233.643365457319	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATACTGTTACAATCTT	-66164707	True	NA	-22	True	AATAAA	-15	NA	66170027	66137838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153411_66169854
transcript_34411.known	chr12	-	2240	7	FSM	ENSG00000155957.19	ENST00000544599.5	2240	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	236.193952787393	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTATGGTTTCATTTG	-66164191	False	NA	-2	True	ATTAAA	-15	NA	66169511	66136936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66168914
transcript_34412.known	chr12	-	2876	7	FSM	ENSG00000155957.19	ENST00000358230.8	2876	7	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	49.421374143403	1656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAACAAAGCACATCTTGCA	-66164676	True	NA	NA	False	NA	NA	NA	66169996	66135845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_34415.known	chr12	-	844	6	FSM	ENSG00000155957.19	ENST00000398033.8	844	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	261.687294303717	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTACAATCTTTATTT	-66164678	True	NA	-17	True	AATAAA	-20	NA	66169998	66137833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_34416.known	chr12	-	409	5	FSM	ENSG00000155957.19	ENST00000545504.1	409	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	272.934973940681	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATTCATCATCTATGAC	-66164684	True	NA	NA	False	NA	NA	NA	66170004	66138105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66138167_66138723_66138770_66145840_66145959_66147907_66147942_66169854
transcript_34420.known	chr12	-	1177	3	FSM	ENSG00000139233.7	ENST00000446587.2	1177	3	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_2	351	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAAATTAGCCGGGCA	-66121684	True	NA	NA	False	AATACA	-23	NA	66130702	66123306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66124019_66128895_66129114_66130455
transcript_34426.known	chr12	-	220	2	FSM	ENSG00000155957.19	ENST00000542072.1	220	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGCCGCCCTGTCTGGGA	-66164669	True	NA	NA	False	NA	NA	NA	66169989	66161087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66161173_66169854
transcript_34427.known	chr12	-	766	2	FSM	ENSG00000155957.19	ENST00000535812.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGAGTGATGAGTCCTGC	-66164692	True	NA	NA	False	NA	NA	NA	66170012	66168745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66169354_66169854
transcript_34428.known	chr12	-	7728	3	FSM	ENSG00000139233.7	ENST00000266604.7	7728	3	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_2	65	2241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTGATCTGCATACCTT	-66121732	True	NA	-13	True	AATAAA	-17	NA	66130750	66116554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_66124019_66128895_66129114_66130704
transcript_34429.known	chr12	-	851	9	NNC	ENSG00000155957.19	novel	989	8	NA	NA	-1	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	312.903913965613	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGTTACAATCTTTATTT	-66164643	True	NA	-17	True	AATAAA	-20	NA	66169963	66137833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_66138055_66138055_66138166_66138723_66138743_66138744_66138770_66145840_66145959_66147907_66147942_66152270_66152377_66153339_66153449_66169854
transcript_34430.known	chr12	+	11176	15	FSM	ENSG00000111530.13	ENST00000545606.6	11176	15	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_6	102.473316586538	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGCCATCTTGAAGCA	67256614	True	NA	4	True	AATAAA	-16	NA	67269357	67319953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_67269786_67281909_67282054_67292621_67292777_67295032_67295157_67297406_67297664_67297747_67297854_67298949_67299096_67302322_67302616_67304604_67304747_67305103_67306598_67307396_67307493_67309900_67310071_67310151_67310317_67311692_67311801_67312605
transcript_34432.known	chr12	+	772	3	FSM	ENSG00000111530.13	ENST00000539434.1	772	3	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_2	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTGTGGAATAGTTCAG	67267998	False	NA	NA	False	NA	NA	NA	67269725	67293189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_67269786_67281909_67282054_67292621
transcript_34435.known	chr12	-	2980	15	FSM	ENSG00000111554.15	ENST00000682720.1	2980	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	21.8991193560707	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCTTCTCCAGAAAGTT	-68331056	True	NA	-1	True	AATAAA	-16	NA	68332362	68294565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_34438.known	chr12	-	2472	14	FSM	ENSG00000111554.15	ENST00000411698.6	2472	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	25.2647519739991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGAATTTGTTGTTCCT	-68330980	True	NA	NA	False	NA	NA	NA	68332286	68294862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68316580_68316611_68321346_68321447_68321524_68321629_68323072_68323241_68326656_68327022_68331106_68331222_68332227
transcript_34440.known	chr12	-	2918	14	FSM	ENSG00000111554.15	ENST00000303145.11	2918	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_10	9.65928440144139	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTTGGCTTCTCCAGAAAG	-68331026	True	NA	-3	True	AATAAA	-14	NA	68332332	68294567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68295367_68296922_68296983_68302619_68302873_68313442_68313553_68313643_68313754_68314947_68315266_68316077_68316254_68321346_68321447_68321524_68321629_68323072_68323241_68325440_68325576_68326656_68327022_68331106_68331222_68332227
transcript_34449.known	chr12	-	2718	3	FSM	ENSG00000111554.15	ENST00000393543.7	2718	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAGATACGTAATTTTGT	-68331018	True	NA	NA	False	AATAAA	-22	NA	68332324	68325004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68327511_68331106_68331222_68332227
transcript_3445.known	chr1	+	2340	7	FSM	ENSG00000117751.18	ENST00000311772.10	2340	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	6.20259802197613	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAATGAGAGAATGTAGT	27828415	True	NA	17	True	AATAAA	-24	NA	27830781	27851676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27830892_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_34450.known	chr12	-	2170	3	FSM	ENSG00000111554.15	ENST00000430606.3	2170	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTTTATTCTAAAATGT	-68331075	True	NA	-13	True	ATTAAA	-12	NA	68332381	68325120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68327022_68331106_68331222_68332227
transcript_34451.known	chr12	+	1072	9	FSM	ENSG00000127314.18	ENST00000537460.5	1072	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	292.861928858976	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTGCACATTCTAATCAC	68602551	True	NA	NA	False	NA	NA	NA	68610907	68659401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68624670_68624874_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_34453.known	chr12	+	13378	8	FSM	ENSG00000127314.18	ENST00000250559.14	13378	8	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_1	64.7598389026245	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGATGACTGTATTATT	68602542	True	NA	NA	False	AATAAA	-23	NA	68610898	68671901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68648698_68648782_68650399_68650469_68651994_68652052_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_34460.known	chr12	+	977	6	FSM	ENSG00000127314.18	ENST00000539091.5	977	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	308.844556371	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCCAAAGAGCTCCTAT	68602572	True	NA	NA	False	AATAAA	-3	NA	68610928	68659647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611053_68648698_68648782_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_34463.known	chr12	+	874	5	FSM	ENSG00000127314.18	ENST00000543393.5	874	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	305.160203827432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTATTTTAGCATAATAAAA	68602562	True	NA	NA	False	NA	NA	NA	68610918	68659626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68611044_68654111_68654253_68656305_68656450_68657100_68657218_68659279
transcript_34464.known	chr12	-	1733	3	FSM	ENSG00000247363.3	ENST00000500695.2	1733	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTATTTCTGTCATAAAA	-68686706	True	NA	NA	False	AATAAA	-16	NA	68686859	68674370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_68675822_68685858_68686018_68686736
transcript_34467.known	chr12	+	2859	26	FSM	ENSG00000111581.10	ENST00000378905.6	2859	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_20	175.167412494448	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTTGTCTCTTTTTCATG	68676173	True	NA	29	True	AATAAA	-40	NA	68686950	68742692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_34468.known	chr12	+	573	3	FSM	ENSG00000111581.10	ENST00000540453.5	573	3	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCCATGCCTATAATCTC	68676193	True	NA	NA	False	AATATA	-32	NA	68686970	68689910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68687074_68688961_68689054_68689532
transcript_34469.known	chr12	+	6213	28	FSM	ENSG00000111581.10	ENST00000229179.9	6213	28	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_9	64.5184972572997	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCAATAAGTTCTTTCCC	68676200	True	NA	NA	False	AATAAA	-14	NA	68686977	68745809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68687074_68688961_68689054_68689532_68689620_68690630_68690747_68691967_68692113_68696818_68696923_68700725_68700854_68702735_68702785_68709237_68709310_68710004_68710094_68713729_68713809_68715626_68715741_68719340_68719432_68719577_68719655_68721117_68721178_68721840_68721987_68722103_68722153_68725726_68725797_68726498_68726618_68727350_68727390_68731109_68731261_68731606_68731720_68732636_68732740_68733451_68733613_68734707_68734834_68735230_68735345_68741812_68741981_68742354
transcript_3447.known	chr1	+	1029	7	FSM	ENSG00000117751.18	ENST00000431586.1	1029	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.66826908263056	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTGATTTGATATTTT	27828957	False	NA	NA	False	AAGAAA	-41	NA	27831323	27850432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27831367_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_34470.known	chr12	+	825	3	FSM	ENSG00000111581.10	ENST00000537662.1	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	715	junction_1	45	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTACTCTTAACAGCTTA	NA	False	NA	NA	False	AAAAAG	-19	NA	68709222	68714378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68709310_68710004_68710094_68713729
transcript_34471.nic	chr12	+	1219	5	NIC	ENSG00000175782.11	novel	3522	5	NA	NA	0	-2578	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	66.015149776396	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATGAAGTTATATGTT	68742924	True	NA	NA	False	AAAAAG	-7	NA	68746124	68760191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68760039
transcript_34473.known	chr12	+	3522	5	FSM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	72.1023577977863	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATTTCTGCTTTTCAT	68742924	True	NA	NA	False	AATACA	-35	NA	68746124	68767158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156_68759240_68764703
transcript_34478.nic	chr12	+	2019	4	ISM	ENSG00000175782.11	ENST00000674096.1	3522	5	0	6967	0	-2578	5prime_fragment	FALSE	canonical	3	6	junction_1	73.5572339519824	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAAATGAAGTTATATGTT	68742924	True	NA	NA	False	AAAAAG	-7	NA	68746124	68760191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_68746780_68748075_68748246_68752031_68752191_68759156
transcript_3448.known	chr1	+	2651	7	FSM	ENSG00000117751.18	ENST00000373931.8	2651	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.66826908263056	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAATTCTAATGAGAGAATG	27828455	True	NA	13	True	AATAAA	-20	NA	27830821	27851672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27831247_27832755_27832817_27838698_27838853_27841013_27841235_27843185_27843331_27847027_27847093_27850092
transcript_34480.known	chr12	+	7490	11	FSM	ENSG00000135679.27	ENST00000258149.11	7490	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_8	9.47048045243746	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGAGAGGAGTGGTACT	68798453	True	NA	NA	False	AATGAA	-19	NA	68808176	68845544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_34482.known	chr12	+	2523	11	FSM	ENSG00000135679.27	ENST00000539479.6	2523	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.3600103305758	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTAGTATTTAAATTTT	68808895	False	NA	NA	False	NA	NA	NA	68809001	68840807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68809087_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828_68835985_68836671_68836750_68839273
transcript_34484.nic	chr12	+	1233	9	ISM	ENSG00000135679.27	ENST00000258149.11	7490	11	-28	9496	-28	-3234	5prime_fragment	FALSE	canonical	3	66	junction_8	10.3682206766639	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGAGATTGAAATAATATT	68798425	True	NA	NA	False	ATTAAA	-21	NA	68808148	68836048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_68808492_68809207_68809293_68813553_68813629_68816811_68816946_68820324_68820375_68824362_68824431_68824554_68824652_68828770_68828932_68835828
transcript_34488.known	chr12	+	406	2	FSM	ENSG00000135679.27	ENST00000400501.2	406	2	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGATCTTAAATTTTT	68843665	False	NA	32	True	AATAAA	-28	NA	68843688	68844195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_68843833_68843933
transcript_34496.known	chr12	+	2229	11	FSM	ENSG00000111605.18	ENST00000266679.8	2229	11	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	420.407944739392	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222276	True	NA	17	True	AATAAA	-14	NA	69239615	69269939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258034_69258146_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_34508.known	chr12	+	1915	10	FSM	ENSG00000111605.18	ENST00000456847.7	1915	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	366.55951296237	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTGTAAAGCTGTTCA	69222260	True	NA	17	True	AATAAA	-14	NA	69239599	69269939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257783_69258685_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_34513.known	chr12	+	6584	10	FSM	ENSG00000111605.18	ENST00000435070.7	6584	10	0	0	0	0	multi-exon	FALSE	canonical	3	990	junction_5	82.4034039809905	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGTTTGTCTTTTTT	69222229	True	NA	15	True	AATAAA	-18	NA	69239568	69274358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251339_69253050_69253155_69256696_69256843_69257731_69257906_69258589_69259095_69259427_69259544_69260043_69260198_69262372_69262563_69269511
transcript_34531.known	chr12	+	234	4	FSM	ENSG00000111605.18	ENST00000551516.1	234	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	564.053385968227	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCAGTTTGCTTCTTGTG	69222302	True	NA	-87	True	AAAACA	-29	NA	69239641	69269573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69239707_69251128_69251142_69262468_69262563_69269511
transcript_3454.known	chr1	+	2713	6	FSM	ENSG00000130775.16	ENST00000373921.8	2713	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	14.1336477952438	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	27870608	True	NA	18	True	AATAAA	-22	NA	27872543	27886675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27881970_27883044_27885294_27885452_27885866
transcript_34540.known	chr12	+	6768	9	FSM	ENSG00000166225.9	ENST00000549921.6	6768	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	19.8049078513383	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTATTGTATTTATATTT	69468149	True	NA	30	True	AATAAA	-38	NA	69470387	69579793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69470531_69530864_69530961_69532013_69532057_69562179_69562275_69569004_69569097_69570330_69570518_69571275_69571435_69572117_69572282_69574004
transcript_34546.known	chr12	+	1916	16	FSM	ENSG00000166226.13	ENST00000299300.11	1916	16	0	0	0	0	multi-exon	TRUE	canonical	3	2057	junction_8	191.891172861657	10007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTTCTTATGTCTTATA	69555145	True	NA	30	True	AATAAA	-15	NA	69585458	69601570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69585525_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_34547.known	chr12	+	2189	16	FSM	ENSG00000166226.13	ENST00000543146.2	2189	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	649.842326175272	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACTTGGTTCTTATGTC	69555352	False	NA	25	True	AATAAA	-10	NA	69585665	69601565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69586010_69586269_69586345_69586752_69586819_69587504_69587617_69587929_69588007_69588149_69588263_69589484_69589688_69592058_69592160_69592975_69593104_69593509_69593614_69597155_69597276_69597637_69597767_69597967_69598072_69598321_69598422_69599862_69600005_69601294
transcript_34548.known	chr12	-	386	2	FSM	ENSG00000127325.19	ENST00000529843.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATCCTGCTCCATCAAA	NA	False	NA	NA	False	AATAAA	-17	NA	69689211	69684364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_69684609_69689069
transcript_3455.known	chr1	+	1650	5	FSM	ENSG00000130775.16	ENST00000373925.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	30.4661697625415	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGTATCATTTATTAAATTC	27870608	True	NA	28	True	AATAAA	-32	NA	27872543	27886685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27872666_27876587_27876729_27879643_27880055_27885294_27885452_27885866
transcript_34560.known	chr12	+	9333	11	FSM	ENSG00000127328.22	ENST00000247833.12	9333	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	26.431799030713	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTATCTACATCCT	69734891	True	NA	14	True	AATAAA	-19	NA	69738859	69823199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_34566.known	chr12	+	1755	10	FSM	ENSG00000127328.22	ENST00000483530.6	1755	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	60.0754669427967	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734893	True	NA	14	True	AATAAA	-15	NA	69738861	69815723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812963_69813034_69815363
transcript_34574.known	chr12	+	1613	9	FSM	ENSG00000127328.22	ENST00000417413.7	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	64.9591217613046	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGTGTACATTTTCTCT	69734893	True	NA	14	True	AATAAA	-15	NA	69738861	69815723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140_69795345_69812777_69812878_69812963_69813034_69815363
transcript_34577.known	chr12	+	2840	9	FSM	ENSG00000127328.22	ENST00000551641.5	2840	9	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	49.1221373211712	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGATAAATAAAAAGT	69778566	True	NA	NA	False	AAAAAG	-15	NA	69778949	69817181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69779182_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_34579.known	chr12	+	2674	9	FSM	ENSG00000127328.22	ENST00000553099.5	2674	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	62.6313619522999	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGATACTGTACGGTTTG	69778583	True	NA	NA	False	AATAAA	-16	NA	69778966	69817117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69779097_69784719_69784816_69794436_69794515_69795140_69795345_69800208_69800338_69801608_69801722_69812777_69812878_69812963_69813034_69815363
transcript_3458.known	chr1	+	1082	4	FSM	ENSG00000130775.16	ENST00000373927.7	1082	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	32.1489588564786	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGAAGACCCTTATGGAG	27870613	True	NA	NA	False	NA	NA	NA	27872548	27886533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27872666_27876587_27876729_27885294_27885452_27885866
transcript_3459.nnic	chr1	+	1119	3	NIC	ENSG00000130775.16	novel	2713	6	NA	NA	-30	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	39.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGAGAACGGTATCATT	27870577	True	NA	18	True	AATAAA	-22	NA	27872512	27886675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_27872666_27885294_27885452_27885866
transcript_34592.nic	chr12	+	1050	4	ISM	ENSG00000127328.22	ENST00000378815.10	2386	6	-48	11631	-46	0	5prime_fragment	FALSE	canonical	3	128	junction_3	18.263503375737	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATCAGATTATTTAAA	69734845	True	NA	NA	False	AATAAA	-17	NA	69738813	69785016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719
transcript_34595.nic	chr12	+	579	2	ISM	ENSG00000127328.22	ENST00000551641.5	2840	9	-52	32167	-52	-2	5prime_fragment	FALSE	canonical	3	50	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGTATCAGATTATTTA	NA	False	NA	NA	False	AATAAA	-15	NA	69778897	69785014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_69779182_69784719
transcript_34597.known	chr12	+	2386	6	FSM	ENSG00000127328.22	ENST00000378815.10	2386	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_3	30.0626013511805	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAAGTTCAATACTTGG	69734893	True	NA	NA	False	AATAAA	-15	NA	69738861	69796647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69739032_69755383_69755660_69756404_69756664_69784719_69784816_69794436_69794515_69795140
transcript_34598.known	chr12	+	438	2	FSM	ENSG00000127328.22	ENST00000547055.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGTATCAGATTATTTAAA	69756508	True	NA	NA	False	AATAAA	-17	NA	69756522	69785016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_69756664_69784719
transcript_346.known	SIRV4	-	626	2	FSM	SIRV4A	SIRV405	626	2	0	0	0	0	multi-exon	FALSE	canonical	3	8720	junction_1	0	15818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTCTCTTTTCAGCAAG	NA	False	NA	NA	False	NA	NA	NA	13937	8629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4_-_8991_13672
transcript_34608.nnic	chr12	-	690	3	FSM	ENSG00000257815.8	ENST00000689831.1	638	3	-62	10	-43	-4	multi-exon	FALSE	canonical	1	1	junction_1	8.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTCCAAAGTCCTTCTTT	-70243425	False	NA	NA	False	AATAAA	-17	NA	70243441	70219134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70219598_70242796_70242894_70243311
transcript_34609.nic	chr12	-	792	3	FSM	ENSG00000257815.8	ENST00000686072.1	834	3	22	20	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-70242661	True	NA	-15	True	AATAAA	-14	NA	70243376	70242305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243065_70243205_70243311
transcript_34610.nic	chr12	-	609	3	FSM	ENSG00000257815.8	ENST00000686072.1	834	3	22	203	0	0	multi-exon	FALSE	canonical	3	14	junction_2	13	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-70242661	True	NA	NA	False	ATTAAA	-20	NA	70243376	70242488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243065_70243205_70243311
transcript_34611.known	chr12	-	883	2	FSM	ENSG00000257815.8	ENST00000549651.1	883	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTGTTTCTTTTAAAAA	-70242645	True	NA	-15	True	AATAAA	-14	NA	70243360	70242305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243065
transcript_34612.known	chr12	-	452	2	FSM	ENSG00000257815.8	ENST00000553135.2	683	2	28	203	2	0	multi-exon	FALSE	canonical	3	18	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCCTTTATTTCCTTGTA	-70242643	True	NA	NA	False	ATTAAA	-20	NA	70243358	70242488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70242894_70243311
transcript_34618.known	chr12	+	2844	16	FSM	ENSG00000111596.14	ENST00000229195.8	2844	16	0	0	0	0	multi-exon	FALSE	canonical	3	407	junction_1	47.8230999506399	685	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGTGTTGGCTTTGATT	70234257	True	NA	11	True	AATAAA	-19	NA	70243432	70354993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_70243481_70278131_70278275_70310894_70311018_70319297_70319365_70329422_70329571_70330286_70330470_70332766_70332847_70335437_70335564_70337388_70337514_70338442_70338564_70338665_70338823_70342106_70342169_70342257_70342308_70344127_70344229_70346179_70346325_70353828
transcript_34620.known	chr12	+	4717	3	FSM	ENSG00000135643.5	ENST00000258111.5	4717	3	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_2	9	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGTGTGTGTGGCATT	70365809	True	NA	15	True	AATAAA	-15	NA	70366289	70434292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_70367071_70400208_70400337_70430484
transcript_34623.nnic	chr12	+	1026	3	NNC	ENSG00000135643.5	novel	472	3	NA	NA	781	512	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	151	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTCTGCTTGGAAAATGAAT	70367058	False	NA	14	True	ATTAAA	-14	NA	70367070	70431198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_70367255_70400208_70400337_70430484
transcript_34624.known	chr12	+	1298	6	FSM	ENSG00000258168.6	ENST00000667427.1	1298	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTGTCCATATCGAGCTA	70468071	True	NA	NA	False	ATTAAA	-16	NA	70468083	70538811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_70468328_70507894_70508002_70510211_70510285_70513184_70513228_70520198_70520268_70538049
transcript_34625.known	chr12	-	1927	5	FSM	ENSG00000153233.13	ENST00000537619.6	1927	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGTAAAGCATATTCT	-70664651	True	NA	NA	False	AATAAA	-15	NA	70664677	70638078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_70639278_70656703_70656818_70660939_70661098_70662494_70662606_70664332
transcript_34627.nnic	chr12	-	1671	5	NNC	ENSG00000153233.13	novel	1927	5	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGAGTAAAGCATATTCT	-70664712	True	NA	NA	False	AATAAA	-15	NA	70664738	70638078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_70639278_70656703_70656818_70660939_70661098_70662494_70662606_70664649
transcript_34632.known	chr12	-	565	3	FSM	ENSG00000258053.1	ENST00000549357.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	79.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAAGTGTCTGGGCGACT	-71116852	False	NA	-3	True	AATAAA	-20	NA	71118247	71047401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_71047680_71115849_71115959_71118069
transcript_34639.nic	chr12	+	1229	8	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	47.430292567738	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	71685222	True	NA	NA	False	AATAAA	-19	NA	71686086	71704056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_71686321_71686659_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_34640.nic	chr12	+	1376	8	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	43.6755196924795	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	71685222	True	NA	NA	False	AATAAA	-19	NA	71686086	71704056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_71686321_71686659_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_34642.known	chr12	-	7037	35	FSM	ENSG00000133858.17	ENST00000378743.9	7037	35	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_24	13.2282661079014	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTGTCTTTATTCAC	-71662877	True	NA	-2	True	AATATA	-18	NA	71663848	71609598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_71610566_71610694_71610758_71611057_71611098_71611785_71611888_71613334_71613436_71614534_71614701_71614833_71614939_71615205_71615317_71619314_71619410_71619925_71620125_71620209_71620316_71623359_71623598_71624103_71624293_71626259_71626447_71627750_71627935_71628917_71629038_71629608_71629711_71630599_71630722_71630822_71630955_71631777_71631888_71631971_71632515_71632885_71633018_71633263_71633439_71634154_71634305_71634703_71634826_71635442_71635581_71636489_71636655_71636849_71637060_71638417_71638516_71642435_71642560_71644094_71644319_71644876_71645076_71647748_71647814_71656884_71657302_71663012
transcript_34644.nic	chr12	+	1586	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-13	0	intron_retention	FALSE	canonical	0	0	junction_6	40.6478781734053	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71686068	71704056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71700879_71703976
transcript_34645.nic	chr12	+	1733	7	NIC	ENSG00000139291.14	novel	5662	6	NA	NA	-13	0	intron_retention	FALSE	canonical	3	17	junction_6	34.4270565431061	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71686068	71704056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831_71701026_71703976
transcript_34650.known	chr12	+	5662	6	FSM	ENSG00000139291.14	ENST00000266673.10	5662	6	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	7.7614431647729	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGCTACCTGAATTTCT	71685217	True	NA	NA	False	AATACA	-14	NA	71686081	71705047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71686811_71689590_71689705_71696435_71696574_71697279_71697535_71698899_71699110_71700831
transcript_34656.known	chr12	+	4432	3	FSM	ENSG00000173451.7	ENST00000308086.3	4432	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	2	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGTCATGCCTGTTATT	71663565	True	NA	8	True	ATTAAA	-19	NA	71664300	71680644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71664581_71674202_71674399_71676688
transcript_34659.known	chr12	+	672	2	FSM	ENSG00000173451.7	ENST00000547843.1	672	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGATGTTTCTGTTTTT	71664469	False	NA	NA	False	ATTAAA	-21	NA	71664480	71665440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71664581_71664868
transcript_34660.known	chr12	+	506	4	FSM	ENSG00000139291.14	ENST00000546795.5	506	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	49.9755495773239	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGGTGTACTGTTTCTTA	NA	False	NA	NA	False	AATAAA	-19	NA	71697365	71704056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71697535_71698899_71699110_71700831_71700879_71703976
transcript_34666.known	chr12	+	2159	18	FSM	ENSG00000121749.16	ENST00000319106.12	2159	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.2922713187986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGAGACACTTTGTTGC	71837690	True	NA	NA	False	NA	NA	NA	71839758	71923223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71861404_71861497_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_34669.known	chr12	+	3157	17	FSM	ENSG00000121749.16	ENST00000485960.7	3157	17	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	19.1978799285234	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGTTTTTAGTTAAATT	71837690	True	NA	4	True	AATAAA	-13	NA	71839758	71924313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_34679.known	chr12	+	6184	18	FSM	ENSG00000121749.16	ENST00000550746.5	6184	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	41.8829312583999	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTTCCATCAGTACCT	71837649	True	NA	NA	False	ATTAAA	-14	NA	71839717	71927248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_71839812_71872069_71872169_71872928_71873004_71880468_71880608_71884810_71885022_71893221_71893325_71894324_71894376_71894685_71894884_71895946_71896076_71896676_71896781_71897846_71897942_71907021_71907139_71913825_71913927_71917697_71917798_71918450_71918549_71920730_71920848_71921367_71921455_71922982
transcript_34683.nic	chr12	-	820	4	NIC	ENSG00000236333.4	novel	7270	5	NA	NA	-9	-2360	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	3.55902608401044	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTCTTCAGTTCTTTCTC	-72272911	False	NA	-1	True	ATTAAA	-17	NA	72272930	72261936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_72262111_72264481_72264622_72271822_72272163_72272764
transcript_34684.known	chr12	-	3088	3	FSM	ENSG00000236333.4	ENST00000655489.1	3088	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTTAAGTGTGTGTCTG	-72272217	False	NA	NA	False	AATAAA	-3	NA	72272236	72259576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_72262111_72264481_72264622_72271822
transcript_3469.known	chr1	-	1584	9	FSM	ENSG00000117748.10	ENST00000373912.8	1584	9	0	0	0	0	multi-exon	FALSE	canonical	3	672	junction_5	48.6441157798145	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	-27909354	True	NA	0	True	AATAAA	-29	NA	27914575	27891523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_34690.nnic	chr12	-	1072	6	NNC	ENSG00000251138.7	novel	1210	8	NA	NA	-106942	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.9293765408777	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTCTCGGGTGTGTCTTT	-74508820	True	NA	NA	False	ATTAAA	-22	NA	74509542	74199571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_74200074_74285024_74285094_74285859_74285947_74306557_74306670_74321534_74321695_74509400
transcript_34696.known	chr12	-	1209	2	FSM	ENSG00000180881.20	ENST00000548958.2	1209	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCAGTCTTGGGTATTTCT	-75390376	True	NA	NA	False	ATTAAA	-20	NA	75390910	75359883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_75361020_75390837
transcript_34698.known	chr12	+	422	2	FSM	ENSG00000254451.2	ENST00000534648.2	422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGGAAGCAGAAGCTC	NA	False	NA	NA	False	AATAAA	-31	NA	75295055	75298508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75295169_75298199
transcript_34700.nnic	chr12	+	454	4	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-15	-142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.6220236220354	474	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATCATCACTTTGCTTCT	75366424	True	NA	NA	False	AATAAA	-25	NA	75366921	75370242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_75367014_75369476_75369654_75369959_75369987_75370084
transcript_34701.nnic	chr12	+	596	4	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.6220236220354	315	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCCATATGTGTATC	75366424	True	NA	NA	False	AATAAA	-22	NA	75366921	75370384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_75367014_75369476_75369654_75369959_75369987_75370084
transcript_34702.known	chr12	+	404	3	FSM	ENSG00000173401.10	ENST00000547144.1	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	18.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAAATCCATATGTGTATC	75366439	True	NA	NA	False	AATAAA	-22	NA	75366936	75370384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75367014_75369959_75369987_75370084
transcript_34704.nnic	chr12	+	422	3	NNC	ENSG00000173401.10	novel	404	3	NA	NA	-15	-147	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	27	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAACTTATCATCACTTTG	75366424	True	NA	NA	False	AATAAA	-20	NA	75366921	75370237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_75367014_75369476_75369654_75370084
transcript_34708.known	chr12	+	484	2	FSM	ENSG00000173401.10	ENST00000548623.1	484	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATCCATATGTGTATCAAA	NA	False	NA	NA	False	AATAAA	-25	NA	75366832	75370387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75367014_75370084
transcript_3471.known	chr1	-	1162	9	FSM	ENSG00000117748.10	ENST00000373909.7	1162	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	235.011036974862	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTACAAATAAGCTTGTTAC	-27914094	False	NA	NA	False	NA	NA	NA	27914746	27891923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27897632_27897708_27906927_27907042_27907180_27907283_27914062_27914170_27914626
transcript_34710.known	chr12	+	1729	4	FSM	ENSG00000180481.11	ENST00000320460.8	1729	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTATGGTAGAATGATTT	75391085	True	NA	NA	False	AATAAA	-17	NA	75391108	75424040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_75391351_75410433_75410680_75413597_75413702_75422903
transcript_34714.known	chr12	-	10104	10	FSM	ENSG00000111615.14	ENST00000229214.9	10104	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_9	14.8099065943487	775	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCAGTTCTTCCACTTTGT	-75505886	True	NA	NA	False	AATAAA	-14	NA	75511609	75490862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_75499952_75501722_75501817_75501922_75502001_75503903_75504075_75505197_75505255_75506315_75506400_75506483_75506610_75506781_75506917_75508273_75508447_75511512
transcript_34716.known	chr12	+	779	2	FSM	ENSG00000257839.1	ENST00000547721.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGCATTACAGAAAATA	76032603	False	NA	NA	False	AATAAA	-8	NA	76032657	76033897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_76032803_76033263
transcript_34751.known	chr12	-	1597	12	FSM	ENSG00000187109.15	ENST00000544816.5	1597	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_11	739.542856340075	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAATTGGCAAGAC	-76046274	True	NA	12	True	NA	NA	NA	76084731	76047966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76084566
transcript_34754.known	chr12	-	1339	12	FSM	ENSG00000187109.15	ENST00000548044.5	1339	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	739.088560881878	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAATAAATAAATTGCAAAAC	-76046209	True	NA	-32	True	AAAACA	-44	NA	76084666	76049588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_3476.nnic	chr1	-	1686	8	NIC	ENSG00000117748.10	novel	1584	9	NA	NA	-6	0	intron_retention	FALSE	canonical	3	15	junction_4	255.039892837916	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCGTTTTTCTTTCTGAG	NA	False	NA	0	True	AATAAA	-29	NA	27914752	27891523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_27892248_27894011_27894107_27894289_27894398_27897004_27897122_27906927_27907042_27907180_27907283_27914062_27914170_27914433
transcript_34772.known	chr12	-	1074	10	FSM	ENSG00000187109.15	ENST00000551992.5	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_9	752.157555073617	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAATGTCACTTTGAA	-76084077	False	NA	11	True	AATAGA	-45	NA	76084094	76053328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76083832
transcript_34780.known	chr12	-	1896	16	FSM	ENSG00000187109.15	ENST00000393263.7	1896	16	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	464.707774365305	2894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTGGGCCTATTTGTAAT	-76046209	True	NA	51	True	NA	NA	NA	76084666	76047154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76047719_76048392_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_34781.known	chr12	-	13159	15	FSM	ENSG00000187109.15	ENST00000618691.5	13159	15	0	0	0	0	multi-exon	FALSE	canonical	3	1680	junction_9	366.031698192428	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTTACATGTCTTTAA	-76046228	True	NA	NA	False	ATTAAA	-19	NA	76084685	76036584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_34782.known	chr12	-	2031	13	FSM	ENSG00000187109.15	ENST00000431879.7	2031	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	911.683683570617	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGTTCTTACAAGATAAT	-76046228	True	NA	-17	True	AATAAA	-16	NA	76084685	76047594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76060137_76060280_76067370_76067474_76068908_76068995_76084566
transcript_34783.known	chr12	-	1967	13	FSM	ENSG00000187109.15	ENST00000547773.5	1967	13	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	690.088883164094	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTTGCAGCTAAAATA	-76046272	True	NA	6	True	NA	NA	NA	76084729	76047631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76048465_76049199_76049251_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76074202_76074240_76084566
transcript_34784.known	chr12	-	1686	14	FSM	ENSG00000187109.15	ENST00000535020.6	1686	14	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	671.479405280591	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGACTTCGTGCTTTTTATA	-76046155	True	NA	NA	False	AAAACA	-13	NA	76084612	76048994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76049526_76049755_76049786_76050530_76050654_76053090_76053111_76053204_76053351_76053769_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76068908_76068995_76074202_76074240_76084566
transcript_34785.known	chr12	-	543	3	FSM	ENSG00000187109.15	ENST00000547969.5	543	3	0	0	0	0	multi-exon	FALSE	canonical	3	2452	junction_2	59.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTTGTGTTGGGAAATT	-76052618	False	NA	-6	True	AATAAA	-16	NA	76053158	76049433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76049786_76050530_76050654_76053090
transcript_34786.known	chr12	-	818	7	FSM	ENSG00000187109.15	ENST00000548273.5	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	864.549738303124	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTATGGGTTGTACAGGGT	-76046278	True	NA	NA	False	NA	NA	NA	76084735	76053787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76053910_76055018_76055091_76056032_76056162_76059797_76059879_76060137_76060280_76067370_76067474_76084566
transcript_34787.known	chr12	-	552	2	FSM	ENSG00000187109.15	ENST00000551500.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	1734	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAAATAGAACATTACTA	-76046226	True	NA	NA	False	TATAAA	-40	NA	76084683	76073804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76074240_76084566
transcript_34788.known	chr12	-	679	3	FSM	ENSG00000187109.15	ENST00000552013.1	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	989	junction_1	695	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTTTTGCAGCTAAAA	-76049414	False	NA	4	True	NA	NA	NA	76049721	76047633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76047719_76048392_76048465_76049199
transcript_34789.nnic	chr12	+	863	3	NNC	ENSG00000257219.6	novel	1943	4	NA	NA	32092	-7361	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTCGT	NA	False	NA	NA	False	AATAAA	-16	NA	76291974	76297739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_76292271_76293812_76294006_76297365
transcript_34790.known	chr12	-	3568	2	FSM	ENSG00000179941.9	ENST00000650064.2	3568	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTTTTTTCATTTTTTTT	-76346293	True	NA	NA	False	AATGAA	-17	NA	76348415	76344473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76347788_76348161
transcript_34792.known	chr12	-	3157	23	FSM	ENSG00000091039.17	ENST00000393250.8	3157	23	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_21	39.1850873978886	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTCAAGTTGGTTTGG	-76554977	True	NA	53	True	NA	NA	NA	76559809	76355835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76356022_76356625_76356729_76358705_76358812_76369213_76369302_76369636_76369823_76371447_76371585_76373343_76373434_76375272_76375371_76378451_76378551_76384253_76384351_76386167_76386267_76386578_76386661_76389644_76389830_76390419_76390658_76392580_76392753_76394644_76394730_76397693_76397898_76399872_76399975_76402688_76402767_76410563_76410635_76450850_76450980_76487509_76487619_76559396
transcript_34793.known	chr12	-	902	6	FSM	ENSG00000091039.17	ENST00000553139.5	902	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	51.6821052202791	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTAAAGGTCAGTGTGTTT	-76554976	True	NA	NA	False	NA	NA	NA	76559808	76399880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76399975_76402688_76402767_76410563_76410635_76450850_76450989_76487509_76487619_76559396
transcript_34796.nnic	chr12	+	624	4	NNC	ENSG00000257526.2	novel	386	3	NA	NA	-2435	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.942809041582063	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTAGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	76559858	76615431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_76560234_76562294_76562359_76570710_76570767_76615302
transcript_34797.nnic	chr12	+	568	3	NNC	ENSG00000257526.2	novel	386	3	NA	NA	-2435	-136	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCAAGTAGTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	76559858	76615431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_76560234_76562294_76562359_76615302
transcript_34798.known	chr12	+	480	1	FSM	ENSG00000243071.1	ENST00000485945.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGGTGTTAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	76660404	76660884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_76660400_76660900
transcript_34799.known	chr12	+	4732	17	FSM	ENSG00000186908.15	ENST00000426126.7	4732	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	11.4318633651737	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTGCTTATGATTTCAC	76762973	True	NA	29	True	AATAAA	-14	NA	76764114	76853696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_76764330_76797433_76797538_76805316_76805440_76809042_76809121_76809712_76809858_76815145_76815211_76815856_76816020_76822405_76822532_76826907_76827051_76828389_76828491_76841981_76842107_76842918_76842982_76845708_76845803_76846595_76846680_76848232_76848391_76849375_76849471_76850846
transcript_34818.known	chr12	-	754	6	FSM	ENSG00000175183.10	ENST00000546966.5	754	6	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_5	607.896043744323	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCCCTGTACTTGGATA	-76853686	True	NA	NA	False	ACTAAA	-35	NA	76879023	76858841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878962
transcript_34826.known	chr12	-	908	6	FSM	ENSG00000175183.10	ENST00000311083.10	908	6	0	0	0	0	multi-exon	TRUE	canonical	3	1484	junction_5	67.5988165576884	15994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCATTGTCTTTTAATTA	-76853682	True	NA	-15	True	AATAAA	-19	NA	76879019	76858708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_76859029_76859546_76859641_76860283_76860414_76863175_76863345_76866148_76866262_76878937
transcript_34830.known	chr12	+	4705	11	FSM	ENSG00000067715.14	ENST00000261205.9	4705	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	12.8471786786049	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTGCGTTCCCACTCT	78855903	True	NA	13	True	AATAAA	-21	NA	78864773	79452008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007_79292131_79296068_79296237_79299383_79299552_79353501_79353620_79444072_79444207_79448917
transcript_34838.nic	chr12	+	1057	6	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	690	158209	-91	-4054	internal_fragment	FALSE	canonical	3	104	junction_2	11.9264412127005	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAGAAACTGGGAAA	78864616	False	NA	29	True	AAAAAG	-12	NA	78864682	79292070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786_79285972_79292007
transcript_34844.nic	chr12	+	927	5	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	690	164375	-91	0	internal_fragment	FALSE	canonical	3	104	junction_2	13.2547161418116	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGGAGGGAAGAATGCCA	78864616	False	NA	18	True	AAAAAG	-24	NA	78864682	79285904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502_79217686_79285786
transcript_34852.nic	chr12	+	1035	4	ISM	ENSG00000067715.14	ENST00000393240.7	3095	12	690	232368	-91	394	internal_fragment	FALSE	canonical	3	104	junction_2	14.8174071805952	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCAGCTTGTATTTAAT	78864616	False	NA	NA	False	CATAAA	-29	NA	78864682	79217911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_78865110_78977798_78977932_79047296_79047363_79217502
transcript_34858.nnic	chr12	+	457	3	NNC	ENSG00000067715.14	novel	4592	10	NA	NA	-91	-300378	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTTGAAATGTTTTC	78864616	False	NA	NA	False	AATAAA	-21	NA	78864682	78917139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_78864851_78864997_78865110_78916962
transcript_34862.nnic	chr12	+	713	3	NNC	ENSG00000067715.14	novel	3095	12	NA	NA	-481	394	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	64.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTGCAGCTTGTATTTAAT	79044832	True	NA	NA	False	CATAAA	-29	NA	79045149	79217911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_79045388_79047296_79047363_79217502
transcript_34869.nnic	chr12	+	567	2	NNC	ENSG00000067715.14	novel	4592	10	NA	NA	-54	-300378	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAGTTGAAATGTTTTC	78855849	True	NA	NA	False	AATAAA	-21	NA	78864719	78917139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_78865110_78916962
transcript_3487.known	chr1	+	1866	8	FSM	ENSG00000130768.15	ENST00000373894.8	1866	8	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	17.0281879151444	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTGTTGTGTTCCTTTT	27930049	True	NA	21	True	AAAACA	-20	NA	27934999	27959152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_34879.nic	chr12	+	874	4	NIC	ENSG00000257474.5	novel	816	3	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_1	4.32049379893857	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	79539721	True	NA	29	True	AATAGA	-34	NA	79540193	79550535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_79540447_79542308_79542392_79546065_79546177_79550108
transcript_34889.known	chr12	+	567	3	FSM	ENSG00000257474.5	ENST00000552167.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTATTCTGAATGTATA	79545435	True	NA	29	True	AATAGA	-34	NA	79545529	79550535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_79545559_79546065_79546177_79550108
transcript_34893.known	chr12	-	8991	7	FSM	ENSG00000177425.11	ENST00000328827.9	8991	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	267.416497870519	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTTTTGTATGTG	-79685214	True	NA	-5	True	AATAAA	-19	NA	79690964	79584878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79592694_79594328_79594434_79596510_79596659_79613574_79613610_79621075_79621208_79689728_79690392_79690871
transcript_34896.known	chr12	-	1573	4	FSM	ENSG00000177425.11	ENST00000551712.1	1573	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	430.616096102111	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCATAATGATGCCGTTTA	-79690070	False	22498	NA	False	NA	NA	NA	79690080	79603667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79604722_79613574_79613610_79621075_79621208_79689728
transcript_34899.known	chr12	-	427	2	FSM	ENSG00000177425.11	ENST00000547016.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAATTTGTCATTTTCA	-79690051	False	22498	-27	True	TTTAAA	-20	NA	79690061	79688371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79688466_79689728
transcript_349.known	SIRV4001	+	3997	1	FSM	SIRV4001A	SIRV4001	3997	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4001_+_0_4000
transcript_34900.known	chr12	-	5620	25	FSM	ENSG00000058272.19	ENST00000450142.7	5620	25	0	0	0	0	multi-exon	TRUE	canonical	3	243	junction_13	73.4221053604128	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAACTAGTTTTTTTA	-79935083	False	NA	-4	True	CATAAA	-18	NA	79935097	79773567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_34901.known	chr12	-	2925	24	FSM	ENSG00000058272.19	ENST00000550107.5	2925	24	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_12	77.6252448559191	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAGCAGCAAGT	-79934917	False	NA	NA	False	NA	NA	NA	79934931	79775928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79776016_79778549_79778601_79781814_79781863_79786373_79786479_79788647_79788784_79790466_79790484_79793862_79793929_79795637_79795760_79796781_79796951_79797194_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_34906.nic	chr12	-	2438	16	ISM	ENSG00000058272.19	ENST00000437004.6	4639	25	248	22924	-82	0	internal_fragment	FALSE	canonical	3	243	junction_4	74.7161740633624	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAACAAGAAAATGAAGA	-79935198	False	NA	NA	False	AAAACA	-28	NA	79935212	79797329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79806165_79806334_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_34907.nic	chr12	-	2270	15	ISM	ENSG00000058272.19	ENST00000550107.5	2925	24	-281	21401	-82	0	5prime_fragment	FALSE	canonical	3	169	junction_3	83.3314013381486	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAGAACAAGAAAATGAAGA	-79935198	False	NA	NA	False	AAAACA	-28	NA	79935212	79797329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_79797396_79798493_79798585_79805591_79805769_79807225_79807331_79808482_79808578_79809794_79810011_79817393_79817519_79820773_79820932_79821077_79821167_79822115_79822191_79828319_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_34911.nic	chr12	-	3046	5	ISM	ENSG00000058272.19	ENST00000550510.5	631	6	-497	5235	-82	1781	5prime_fragment	FALSE	canonical	3	439	junction_1	27.3895509273153	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAACCCGAAACAAT	-79935198	False	NA	NA	False	NA	NA	NA	79935212	79826346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_79828465_79832331_79832492_79845301_79845421_79872807_79872939_79934694
transcript_34913.known	chr12	-	443	3	FSM	ENSG00000058272.19	ENST00000550007.1	443	3	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAAAGAAGGAGTCA	-79805789	False	NA	NA	False	GATAAA	-8	NA	79805816	79797268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_79797396_79798493_79798585_79805591
transcript_34914.known	chr12	+	3234	3	FSM	ENSG00000257557.2	ENST00000552885.2	3234	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCATGTTTTCTTTCTT	79934831	False	NA	NA	False	GATAAA	-25	NA	79934900	79942712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_79935659_79938727_79938853_79940361
transcript_34916.nnic	chr12	+	1455	2	NIC	ENSG00000257557.2	novel	3234	3	NA	NA	354	-1300	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACTATAACAGTAATTGA	79935035	True	NA	NA	False	NA	NA	NA	79935254	79941412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_79935659_79940361
transcript_34917.known	chr12	-	435	1	FSM	ENSG00000230291.5	ENST00000492623.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	198	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCTTATATACAAGCTTT	-80103246	False	NA	NA	False	AATACA	-30	NA	80103333	80102898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80102900_80103300
transcript_34918.nnic	chr12	-	470	2	Antisense	novelGene_ENSG00000139304.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTATTTGGTGATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	80478017	80477403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_80477633_80477776
transcript_34920.nnic	chr12	-	394	2	Antisense	novelGene_ENSG00000139304.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTATTTGGTGATAAT	NA	False	NA	NA	False	AATAAA	-18	NA	80478026	80477403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_80477633_80477861
transcript_34922.nic	chr12	+	961	2	ISM	ENSG00000111046.4	ENST00000228641.4	1329	3	653	0	653	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTTGGTCCTAATTTGA	NA	False	NA	NA	False	ATTAAA	-19	NA	80708286	80709474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_80708615_80708841
transcript_34923.nic	chr12	+	889	2	ISM	ENSG00000111046.4	ENST00000228641.4	1329	3	817	-92	817	92	3prime_fragment	FALSE	canonical	2	3	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCCCATTTATTTGGG	80708425	True	NA	NA	False	AATAAA	-29	NA	80708450	80709566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_80708615_80708841
transcript_34924.known	chr12	+	1540	3	FSM	ENSG00000111049.4	ENST00000228644.4	1540	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGCTCATGATCTTT	80716886	False	NA	NA	False	AATAAA	-19	NA	80716911	80719671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_80717565_80718357_80718434_80718860
transcript_34925.known	chr12	-	989	7	FSM	ENSG00000111052.8	ENST00000261203.7	989	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_3	17.5309250564063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAACACCTTCTTTCTCTG	-80937770	False	NA	-3	True	TATAAA	-17	NA	80937780	80797574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
transcript_34927.known	chr12	-	6121	6	FSM	ENSG00000111052.8	ENST00000552864.6	6121	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	8.08949936646267	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAAGTATTGTTTTCATT	-80937800	True	NA	3	True	AGTAAA	-17	NA	80937934	80792519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80797727_80811464_80811684_80845729_80845940_80848250_80848323_80889250_80889370_80937640
transcript_34932.nic	chr12	-	972	5	ISM	ENSG00000111052.8	ENST00000261203.7	989	7	-188	47989	-34	0	5prime_fragment	FALSE	canonical	2	6	junction_1	20.2546291005291	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTCATTTCATT	NA	False	NA	2	True	ATTAAA	-22	NA	80937968	80845563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_80845940_80848098_80848176_80848250_80848323_80889250_80889370_80937640
transcript_34933.nic	chr12	-	895	4	ISM	ENSG00000111052.8	ENST00000549417.5	905	5	-264	3875	-34	0	5prime_fragment	FALSE	canonical	3	42	junction_1	4.24264068711928	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTCATTTCATT	NA	False	NA	2	True	ATTAAA	-22	NA	80937968	80845563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_80845940_80848250_80848323_80889250_80889370_80937640
transcript_34934.nic	chr12	-	602	4	ISM	ENSG00000111052.8	ENST00000549417.5	905	5	-22	3926	-22	-51	5prime_fragment	FALSE	canonical	3	42	junction_1	4.24264068711928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCTTTCTAAGCATTGAT	-80936804	True	NA	-49	True	AATAAA	-19	NA	80937726	80845614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_80845940_80848250_80848323_80889250_80889370_80937640
transcript_34935.known	chr12	-	546	3	FSM	ENSG00000111052.8	ENST00000552093.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	4.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATGTCTCATTTCATT	NA	False	NA	2	True	ATTAAA	-22	NA	80889348	80845563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_80845940_80848250_80848323_80889250
transcript_34939.known	chr12	+	8391	16	FSM	ENSG00000111058.8	ENST00000548058.6	8391	16	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	10.4656050417015	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTACTATTTATTTATTGAT	81076544	True	NA	NA	False	AATAAA	-21	NA	81078078	81261210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81151843_81151925_81152000_81152097_81174787_81174940_81199340_81199445_81216900_81216997_81220012_81220077_81231056_81231139_81233348_81233472_81253306_81253407_81253494_81253671_81254856
transcript_3494.known	chr1	+	1548	7	FSM	ENSG00000130768.15	ENST00000373888.8	1548	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	16.2420920929404	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGGCTTCCCACAGTCT	27930088	True	NA	26	True	GATAAA	-23	NA	27935038	27956480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27953214_27953359_27954353_27954527_27955683_27955865_27955948
transcript_34946.nnic	chr12	+	1890	7	NNC	ENSG00000111058.8	novel	8391	16	NA	NA	-541	5409	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	34.9316793501575	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATTAGCTGAG	81077475	True	NA	NA	False	ACTAAA	-12	NA	81077515	81148911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_81078432_81109559_81109705_81134815_81135005_81139130_81139266_81143106_81143248_81146301_81146353_81148598
transcript_34949.nic	chr12	-	941	5	NIC	ENSG00000139220.17	novel	582	4	NA	NA	-63	227	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	0.433012701892219	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATACAACTTTATCTCTC	-81759402	False	NA	NA	False	AATAAA	-20	NA	81759413	81675258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_81675653_81676790_81676845_81753972_81754224_81758399_81758508_81759279
transcript_34950.nic	chr12	-	881	5	NIC	ENSG00000139220.17	novel	582	4	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	0.433012701892219	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTACTGATAAAGATCTTAT	-81759569	False	NA	NA	False	AATAAA	-18	NA	81759580	81675485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_81675653_81676790_81676845_81753972_81754224_81758399_81758508_81759279
transcript_34959.known	chr12	-	1585	4	FSM	ENSG00000133773.12	ENST00000256151.8	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	53.0471488394994	2046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGTCTGAAATTGCATTA	-82348783	True	NA	NA	False	AATAAA	-21	NA	82358387	82352302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358222
transcript_34960.known	chr12	-	984	4	FSM	ENSG00000133773.12	ENST00000548126.1	984	4	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	122.335603975294	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAGGAATCAGAGCTATCA	-82357903	True	NA	NA	False	AATAAA	-11	NA	82358786	82352846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82353313_82354494_82354595_82356959_82357270_82358678
transcript_34961.known	chr12	-	600	2	FSM	ENSG00000133773.12	ENST00000552606.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAGAAGTCACGGTTTAAT	-82348805	True	NA	74	True	NA	NA	NA	82358409	82356856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_82357270_82358222
transcript_34963.nnic	chr12	+	1826	11	NIC	ENSG00000127720.8	novel	2064	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	12.7514705034361	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTTATAATCCATTTTT	82357851	True	NA	6	True	AATAAA	-17	NA	82358528	82479166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_82358825_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_34970.known	chr12	+	2064	12	FSM	ENSG00000127720.8	ENST00000248306.8	2064	12	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.28837802627236	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGACCTACATTCCTGA	82357851	True	NA	79	True	AATAAA	-28	NA	82358528	82479239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794_82399395_82402982_82403131_82430892_82430988_82434694_82434725_82438717_82438792_82456726_82456821_82476643_82476719_82477280_82477353_82478931
transcript_34971.known	chr12	+	743	4	FSM	ENSG00000127720.8	ENST00000548200.5	743	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	3.39934634239519	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAAATGGCAAAAGAAAG	82357862	True	NA	NA	False	NA	NA	NA	82358539	82398980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_82358825_82386802_82386968_82389815_82389923_82398794
transcript_34975.nnic	chr12	-	794	2	Antisense	novelGene_ENSG00000257296.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	94	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATAATGCTCATGTTTTCA	-84689338	True	NA	NA	False	AATAAA	-26	NA	84689821	84666034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_84666620_84689612
transcript_34977.known	chr12	-	4821	13	FSM	ENSG00000072041.18	ENST00000681721.1	4821	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	72.9274753893666	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCTAAGGTGTACAATAT	NA	False	NA	NA	False	AATAAA	-5	NA	84913629	84859504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522_84912706_84913499
transcript_34978.known	chr12	-	4799	12	FSM	ENSG00000072041.18	ENST00000266682.10	4799	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	70.380077947533	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGCTGTTTTGATATA	-84910087	True	NA	NA	False	AATAAA	-19	NA	84912799	84859490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84862007_84863438_84863602_84867033_84867194_84870477_84870671_84872601_84872795_84873086_84873329_84876496_84876608_84883858_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_34979.known	chr12	-	4312	5	FSM	ENSG00000072041.18	ENST00000450363.4	4312	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	24.8130510014387	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTTGTTTTCGATTTT	-84912864	False	NA	-1	True	AATAAA	-22	NA	84912876	84880844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84884041_84885434_84885562_84885910_84886069_84891831_84892309_84912522
transcript_3498.known	chr1	+	1611	7	FSM	ENSG00000130768.15	ENST00000549094.1	1611	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	85.8229767214662	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCTGTGTTGTGTTCCTTT	27930159	False	NA	20	True	AAAACA	-19	NA	27935109	27959151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27935245_27945231_27945446_27949064_27949163_27954353_27954527_27955683_27955865_27955948_27956083_27958475
transcript_34989.known	chr12	-	650	2	FSM	ENSG00000072041.18	ENST00000551010.2	650	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTAATCTTTTTAAGTG	-84912693	False	NA	NA	False	NA	NA	NA	84912705	84891831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84892299_84912522
transcript_34990.known	chr12	-	3307	2	FSM	ENSG00000072041.18	ENST00000680067.1	3307	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATACCAAGGAATATCATAC	-84910051	True	NA	NA	False	AATATA	-9	NA	84912763	84908937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_84912004_84912522
transcript_34991.known	chr12	-	1018	9	FSM	ENSG00000231738.11	ENST00000532498.7	1018	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTAATTTTGTTTTTCAAA	-85036263	False	NA	NA	False	AATAAA	-16	NA	85036277	85014316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_85014556_85015887_85015972_85017455_85017600_85019625_85019737_85023325_85023401_85027898_85028024_85029718_85029792_85029880_85029974_85036203
transcript_34993.nnic	chr12	+	260	2	Antisense	novelGene_ENSG00000231738.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAATGTGTATAAAGAAT	85004275	True	NA	NA	False	AATAAA	-17	NA	85004380	85015044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_85004520_85014923
transcript_34995.known	chr12	+	4464	17	FSM	ENSG00000133640.20	ENST00000525971.6	4464	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.53602571593056	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAGTATTTTCATTTTT	NA	False	NA	NA	False	AATAAA	-39	NA	85036313	85124858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85036408_85038152_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246_85047471_85052176_85052252_85055546_85057185_85065261_85065415_85066747_85066899_85072906_85073099_85098354_85098549_85098866_85098995_85104003_85104078_85106521_85106616_85121696_85121877_85124069
transcript_34999.known	chr12	+	1890	6	FSM	ENSG00000133640.20	ENST00000529408.1	1890	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAATAAACACATTAAATT	85036254	True	NA	NA	False	AAAAAG	-14	NA	85036339	85048587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85036408_85038149_85038309_85040489_85040602_85044717_85044810_85046019_85046138_85047246
transcript_35.known	ERCC-00076	+	626	1	FSM	ERCC-00076A	DQ883650	626	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1791	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00076_+_0_600
transcript_350.known	SIRV4002	+	3999	1	FSM	SIRV4002A	SIRV4002	3999	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	71	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	3999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4002_+_0_4000
transcript_35001.known	chr12	+	1332	4	FSM	ENSG00000180318.4	ENST00000316824.4	1332	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTGTTATAGATTGAT	85280166	True	NA	NA	False	AATAAA	-14	NA	85280219	85301784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85280488_85283571_85283877_85286852_85286982_85301154
transcript_35004.nnic	chr12	+	741	7	NNC	ENSG00000258815.1	novel	519	3	NA	NA	-67	13237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.38443731048635	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGTGTCTGGTTGAAT	85317631	True	NA	NA	False	AGTAAA	-19	NA	85317992	85356149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_85318116_85318957_85318980_85331807_85331865_85342471_85342720_85353204_85353266_85354991_85355060_85355987
transcript_35009.nnic	chr12	+	748	6	NNC	ENSG00000258815.1	novel	519	3	NA	NA	-131	13237	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_2	1.09544511501033	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATGTGTCTGGTTGAAT	85317567	True	NA	NA	False	AGTAAA	-19	NA	85317928	85356149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_85318116_85318957_85318980_85342471_85342720_85353204_85353266_85354991_85355060_85355987
transcript_35011.nnic	chr12	+	1004	6	NNC	ENSG00000258815.1	novel	519	3	NA	NA	-67	58373	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	0.8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGAAATGATAAAACTATAT	85317631	True	NA	NA	False	AATAAA	-24	NA	85317992	85401285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_85318116_85318957_85318980_85342471_85342720_85399492_85399611_85400075_85400127_85400843
transcript_35020.known	chr12	+	519	3	FSM	ENSG00000258815.1	ENST00000555596.1	519	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTTTTGGATGGAAGC	85317698	True	NA	NA	False	NA	NA	NA	85318059	85342912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85318116_85318957_85318980_85342471
transcript_35021.known	chr12	-	5515	2	FSM	ENSG00000198774.5	ENST00000361228.5	5515	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGATATTGTTTTGGGT	-85836364	True	NA	NA	False	AATAAA	-19	NA	85836409	85800702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_85805963_85836154
transcript_35024.known	chr12	+	1239	4	FSM	ENSG00000133636.11	ENST00000256010.7	1239	4	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	9.41629792788369	1712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTCTCTACAGATTTA	85867913	True	NA	10	True	AATAAA	-24	NA	85874294	85882992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_85874477_85876639_85876702_85878344_85878570_85882222
transcript_35028.known	chr12	-	1937	6	FSM	ENSG00000182050.14	ENST00000552808.7	1894	6	0	-43	0	43	multi-exon	FALSE	canonical	0	0	junction_5	7.98999374217527	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTAATATGAAAGATTTTA	NA	False	NA	NA	False	TTTAAA	-37	NA	86256305	85979012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_85980431_85983522_85983671_85989399_85989553_86028103_86028205_86049673_86049724_86256238
transcript_35035.known	chr12	+	2829	7	FSM	ENSG00000133641.18	ENST00000356891.4	2829	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	23.3339285638364	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTCTGAATTTTTTG	88032070	True	NA	10	True	AATAAA	-18	NA	88035535	88050160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_35037.known	chr12	-	1169	7	FSM	ENSG00000198707.17	ENST00000676331.1	1169	7	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	4.2328083664001	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAGATAATTAGTATTCT	-88141001	True	NA	NA	False	NA	NA	NA	88142099	88130717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_88131219_88136642_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_35040.known	chr12	-	1458	6	FSM	ENSG00000198707.17	ENST00000552770.3	1458	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	2.82842712474619	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGTAACTGTCCTGT	-88141001	True	NA	NA	False	AGTAAA	-21	NA	88142099	88135852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_88136787_88139144_88139192_88139494_88139565_88140955_88141034_88141205_88141335_88141899
transcript_35044.known	chr12	+	583	4	FSM	ENSG00000133641.18	ENST00000552803.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_1	24.1246761636296	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAATCAAATTTATGTAAAG	88032144	False	NA	NA	False	NA	NA	NA	88035609	88043838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88040147_88040266_88042824_88042921_88043598
transcript_35045.known	chr12	+	2740	6	FSM	ENSG00000133641.18	ENST00000550333.5	2740	6	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	83.0339689524715	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGTCTGAATTTTT	88032039	True	NA	8	True	AATAAA	-16	NA	88035504	88050158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88035739_88042824_88042921_88043598_88043716_88045581_88045780_88046806_88046977_88048233
transcript_35046.known	chr12	+	7192	14	FSM	ENSG00000139324.12	ENST00000266712.11	7192	14	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	8.32547953378396	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTAGTTTGCCCTTTCTTA	88138560	True	NA	8	True	AATAAA	-19	NA	88142306	88199887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_88142488_88148287_88148505_88153290_88153510_88154287_88154388_88160113_88160230_88160678_88160852_88166329_88166583_88172596_88172746_88174606_88174728_88176207_88176320_88188842_88188947_88190452_88190623_88192603_88192831_88194837
transcript_35049.known	chr12	-	5441	10	FSM	ENSG00000049130.16	ENST00000644744.1	5441	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	3.09120616516523	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTTACCCTGTCATTTT	-88579981	True	NA	NA	False	AATAAA	-19	NA	88580471	88492792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_88497182_88505158_88505236_88506310_88506379_88507027_88507138_88515533_88515618_88516333_88516491_88518696_88518868_88532440_88532504_88545751_88545866_88580263
transcript_35050.nnic	chr12	+	680	5	NNC	ENSG00000281333.2	novel	493	3	NA	NA	-5	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	88580395	True	NA	8	True	AATAAA	-21	NA	88580525	88600599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_88580611_88581996_88582139_88597947_88598002_88598981_88599066_88600284
transcript_35051.nnic	chr12	+	596	4	NNC	ENSG00000281333.2	novel	493	3	NA	NA	-5	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	3.39934634239519	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	88580395	True	NA	8	True	AATAAA	-21	NA	88580525	88600599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_88580611_88581996_88582139_88597947_88598002_88600284
transcript_35052.nnic	chr12	+	542	3	NNC	ENSG00000281333.2	novel	493	3	NA	NA	-5	-126	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	4	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGGTCGCATTTCTCAG	88580395	True	NA	8	True	AATAAA	-21	NA	88580525	88600599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_88580611_88581996_88582139_88600284
transcript_35054.nnic	chr12	+	531	3	Antisense	novelGene_ENSG00000246363.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_2	2	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTAAAGAGCCCTTGTTC	89087869	True	NA	NA	False	AATACA	-14	NA	89088089	89132355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_89088363_89127328_89127421_89132189
transcript_35057.nnic	chr12	+	647	3	Antisense	novelGene_ENSG00000246363.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_2	0.5	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTTGGTGTTGCTAC	89087869	True	NA	NA	False	AATAAA	-20	NA	89088089	89165138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_89088363_89127328_89127421_89164856
transcript_35059.nnic	chr12	+	559	2	Antisense	novelGene_ENSG00000246363.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	5	junction_1	0	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACATTTTGGTGTTGCTAC	NA	False	NA	NA	False	AATAAA	-20	NA	89088085	89165138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_89088363_89164856
transcript_35065.known	chr12	-	604	3	FSM	ENSG00000139318.8	ENST00000547140.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	252.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTTATGCAGAAGCTCAA	-89351532	False	NA	NA	False	NA	NA	NA	89351582	89349481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89349562_89350587_89351026_89351496
transcript_35066.known	chr12	-	3627	3	FSM	ENSG00000139318.8	ENST00000279488.8	3627	3	0	0	0	0	multi-exon	TRUE	canonical	3	410	junction_2	47.5	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAGAACGTACTTATAT	-89342847	True	NA	NA	False	AATAAA	-23	NA	89352501	89347234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89349562_89350587_89351026_89351639
transcript_35067.known	chr12	-	1959	2	FSM	ENSG00000139318.8	ENST00000308385.6	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAGAATAAAAA	-89352355	False	NA	-48	True	NA	NA	NA	89352405	89348368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89349562_89351639
transcript_35070.known	chr12	-	1392	12	FSM	ENSG00000139323.14	ENST00000547496.5	1392	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.7588580272199	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAAAATTCATTTTCAT	-89524700	True	NA	NA	False	NA	NA	NA	89526000	89421153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89460015_89460039_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_35071.known	chr12	-	3024	12	FSM	ENSG00000139323.14	ENST00000313546.8	3024	12	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_9	23.8490431569934	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	-89524747	True	NA	NA	False	AATAAA	-25	NA	89526047	89419717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_35075.nic	chr12	-	2870	11	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	53	junction_9	22.1379764206216	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	89526065	89419717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_89421258_89425160_89425380_89459637_89459719_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_35078.known	chr12	-	1727	10	FSM	ENSG00000139323.14	ENST00000539190.6	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	38.4171386650526	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAACATTAAAGTCCTG	-89524693	True	NA	NA	False	NA	NA	NA	89525993	89460709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89461307_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89497170_89497343_89525119_89525205_89525880
transcript_35081.nic	chr12	-	2789	10	NIC	ENSG00000139323.14	novel	3024	12	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	32.3377240241444	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTCCTTTTCTTTTTAA	NA	False	NA	NA	False	AATAAA	-25	NA	89526065	89419717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_89421258_89425160_89425380_89466769_89466923_89467616_89467686_89470360_89470495_89471613_89471730_89472167_89472276_89491935_89492116_89525119_89525205_89525880
transcript_3509.known	chr1	+	1578	4	FSM	ENSG00000158156.9	ENST00000675359.1	1578	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	55.3915356550279	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCCTTAGCTCCCCTATCC	27959404	False	NA	NA	False	NA	NA	NA	27960261	27967572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27960363_27963496_27963694_27965718_27965929_27966502
transcript_35091.known	chr12	+	8158	3	FSM	ENSG00000270344.3	ENST00000605233.3	8158	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGTGCTCCATATAATGA	NA	False	NA	NA	False	AATAAA	-13	NA	89524593	89548005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_89524634_89525576_89525797_89540107
transcript_35092.nnic	chr12	+	449	3	NNC	ENSG00000270344.3	novel	2139	3	NA	NA	0	-3014	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGGATTTGGTCCGTG	89525593	False	NA	NA	False	AATAAA	-17	NA	89525611	89540299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_89525797_89528110_89528183_89540107
transcript_35094.nic	chr12	+	503	2	ISM	ENSG00000270344.3	ENST00000655646.1	2139	3	-126	3014	-126	-3014	5prime_fragment	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTGGATTTGGTCCGTG	89525425	False	NA	NA	False	AATAAA	-17	NA	89525485	89540299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_89525797_89540107
transcript_35095.known	chr12	-	7062	21	FSM	ENSG00000070961.16	ENST00000428670.8	7062	21	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_20	38.2480064839986	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTGAACTTTTTGGA	-89708823	False	NA	-9	True	AATAAA	-24	NA	89708838	89588048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_89591296_89599116_89599300_89601325_89601434_89603042_89603255_89603711_89603926_89604154_89604347_89609936_89610044_89610420_89610509_89611192_89611373_89616801_89617040_89619998_89620241_89621548_89621792_89624182_89624398_89626453_89626616_89627677_89627717_89630504_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_35097.nic	chr12	-	1433	6	ISM	ENSG00000070961.16	ENST00000428670.8	7062	21	-41	42456	-41	11318	5prime_fragment	FALSE	canonical	3	55	junction_5	59.454184041159	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATAACAATTTTCTA	-89708864	False	NA	NA	False	AAAAAG	-11	NA	89708879	89630504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89708595
transcript_35098.nic	chr12	-	1299	6	NIC	ENSG00000070961.16	novel	7062	21	NA	NA	-68	11318	combination_of_known_junctions	FALSE	canonical	3	158	junction_5	19.2520128817742	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGAATAACAATTTTCTA	-89705920	True	NA	NA	False	AAAAAG	-11	NA	89709368	89630504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_89630646_89634777_89634904_89634996_89635252_89642157_89642356_89655678_89656108_89709218
transcript_351.known	SIRV4003	+	4001	1	FSM	SIRV4003A	SIRV4003	4001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	124	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	TATAAA	-45	NA	0	4001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV4003_+_0_4000
transcript_3510.known	chr1	+	2178	3	FSM	ENSG00000158156.9	ENST00000373884.6	2178	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	17.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTAGTCTGTGTCATCA	27959115	True	NA	14	True	AATAAA	-17	NA	27959972	27968093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_27960363_27963496_27963694_27966502
transcript_35101.known	chr12	+	5699	3	FSM	ENSG00000245904.5	ENST00000499685.2	5699	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTTATATGTGTACTT	92145990	True	NA	NA	False	AATACA	-18	NA	92146180	92189660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661_92146763_92184125
transcript_35103.nic	chr12	+	416	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	2	52	2	0	multi-exon	FALSE	canonical	2	8	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	NA	False	NA	NA	False	AATAAA	-30	NA	92146084	92146918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661
transcript_35104.nic	chr12	+	405	2	FSM	ENSG00000245904.5	ENST00000685108.1	470	2	65	0	-9	0	multi-exon	FALSE	canonical	2	8	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACCTTAAAAACCAGTGTA	NA	False	NA	NA	False	NA	NA	NA	92146147	92146970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146244_92146661
transcript_35106.known	chr12	+	472	1	FSM	ENSG00000245904.5	ENST00000618125.1	472	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGTGTAGACATTCAAGT	92146256	False	NA	NA	False	AATAAA	-30	NA	92146446	92146918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_92146400_92146900
transcript_35107.known	chr12	-	78	1	FSM	ENSG00000256393.1	ENST00000536425.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCTAGCTTGTTGCACCG	-93083500	False	NA	NA	False	AAGAAA	-23	NA	93083675	93083597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93083600_93083700
transcript_35108.known	chr12	-	1166	3	FSM	ENSG00000257252.6	ENST00000548890.2	1166	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGCCCAAAAAAAAAAAAAAA	-93377683	True	NA	NA	False	NA	NA	NA	93377753	93316721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93317542_93328026_93328056_93377436
transcript_35109.known	chr12	+	9753	5	FSM	ENSG00000173598.14	ENST00000337179.9	9753	5	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_3	226.48220128743	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366893	True	NA	NA	False	AGTAAA	-27	NA	93377882	93408146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_3511.known	chr1	-	5999	18	FSM	ENSG00000158161.16	ENST00000373871.8	5999	18	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_11	20.6726002569605	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTCCTGTGTCTTTTC	-28086142	True	NA	-5	True	AATAAA	-17	NA	28088610	27970343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_35110.known	chr12	+	9708	5	FSM	ENSG00000173598.14	ENST00000415493.7	9708	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_3	139.221047259385	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGTGGTTCATTTTT	93366935	True	NA	NA	False	AGTAAA	-27	NA	93377924	93408146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378422_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_35111.known	chr12	+	1419	5	FSM	ENSG00000173598.14	ENST00000547014.5	1419	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	348.938658649339	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTAGCATGCTCAGT	93378443	True	NA	NA	False	AGTAAA	-30	NA	93378577	93400138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398767_93398856_93399176
transcript_35112.known	chr12	+	3607	5	FSM	ENSG00000173598.14	ENST00000549992.5	3607	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	330.185175318336	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACACACACATGAACTCAG	93378415	True	NA	44	True	AATAAA	-40	NA	93378549	93402301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378791_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_35113.known	chr12	+	765	5	FSM	ENSG00000173598.14	ENST00000548662.5	765	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	329.398694593649	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTGTTTAGATGCCTT	93378443	True	NA	NA	False	TTTAAA	-41	NA	93378577	93399584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93378694_93394608_93394720_93395488_93395534_93398770_93398856_93399176
transcript_35118.known	chr12	-	3018	2	FSM	ENSG00000177889.10	ENST00000550657.1	3018	2	0	0	0	0	multi-exon	FALSE	canonical	3	2646	junction_1	0	684	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAAAGCTTTTGATGACTG	-93413627	True	NA	-15	True	ATTAAA	-17	NA	93441943	93408370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93411300_93441854
transcript_3512.known	chr1	-	5885	17	FSM	ENSG00000158161.16	ENST00000540618.5	5885	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	14.0734679450376	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTTGCTCCTGTGTCTT	-28086169	True	NA	-8	True	AATAAA	-14	NA	28088637	27970346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27974547_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_3513.known	chr1	-	1729	17	FSM	ENSG00000158161.16	ENST00000373863.3	1729	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.8073955345429	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGGCATTATTATCTC	-28086096	True	NA	NA	False	AATAAA	-16	NA	28088564	27977272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27977390_27978373_27978475_27988534_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_35132.known	chr12	+	725	7	FSM	ENSG00000198015.14	ENST00000551396.5	725	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1054.04149454479	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTTAGAGAAACCTATTT	93451155	True	NA	25	True	TATAAA	-22	NA	93467539	93501385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469188_93469356_93470485_93470506_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_35133.known	chr12	+	1983	6	FSM	ENSG00000198015.14	ENST00000393128.8	1983	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	931.808263539233	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACCAGCTTTGTCGATGG	93451132	True	NA	10	True	ATTAAA	-37	NA	93467516	93502652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469191_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93501184
transcript_35134.known	chr12	+	701	6	FSM	ENSG00000198015.14	ENST00000547098.5	701	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1031.93340870426	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTTTCAGTGAATTTTGT	93451133	True	NA	NA	False	AATGAA	-45	NA	93467517	93488472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469188_93469356_93476953_93477018_93479387_93479473_93487496_93487661_93488288
transcript_35135.known	chr12	+	2105	7	FSM	ENSG00000198015.14	ENST00000358678.7	2105	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	1009.02240917743	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGATGGTGTATTCTT	93451133	True	NA	19	True	GATAAA	-19	NA	93467517	93502661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469191_93469356_93470485_93470591_93476953_93477018_93479387_93479473_93487496_93487661_93501175
transcript_35136.known	chr12	+	567	5	FSM	ENSG00000198015.14	ENST00000552326.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	926.227934959856	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGTAATATATAGTAAA	93451132	True	NA	-26	True	NA	NA	NA	93467516	93501291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93467555_93469191_93469356_93479387_93479473_93487496_93487661_93501175
transcript_35138.known	chr12	-	1134	5	FSM	ENSG00000246985.8	ENST00000662875.1	1134	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.51920240520265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAGGGCTTCCAATT	-93570843	False	188	NA	False	AAAACA	-45	NA	93570854	93542819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93570817
transcript_35139.known	chr12	-	2097	5	FSM	ENSG00000246985.8	ENST00000500986.6	2097	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.29980158417708	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAGTAAATAAATGTGGCAA	-93571580	True	NA	NA	False	NA	NA	NA	93571768	93542021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93543306_93545070_93545359_93566743_93566971_93567063_93567160_93571566
transcript_3514.known	chr1	-	1806	17	FSM	ENSG00000158161.16	ENST00000471498.5	1806	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	28.9519402415451	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	-28086129	True	NA	-17	True	AATAAA	-14	NA	28088597	27988478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27998283_27998352_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28027788_28027927_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_35145.nic	chr12	+	2115	4	NIC	ENSG00000120833.14	novel	2391	3	NA	NA	-26	-3	combination_of_known_junctions	FALSE	canonical	3	30	junction_3	136.508851971829	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTTGCACTTATTGAGTT	93571283	False	NA	14	True	AATAAA	-17	NA	93571297	93576203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_93571915_93572684_93573037_93574721_93575174_93575509
transcript_35152.nic	chr12	-	743	4	NIC	ENSG00000246985.8	novel	618	4	NA	NA	-1	56	combination_of_known_junctions	FALSE	canonical	3	7	junction_1	5.43650214343336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTTTGTTTGTTTGTT	-93571581	True	NA	1	True	AATAAA	-26	NA	93571769	93565527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_93565745_93566743_93566971_93567063_93567160_93571566
transcript_35153.known	chr12	+	2761	3	FSM	ENSG00000120833.14	ENST00000340600.6	2761	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	173.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACCTTATTTTCATG	NA	False	NA	NA	False	AATAAA	-15	NA	93569813	93576745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93570199_93572684_93573037_93574721
transcript_35155.known	chr12	+	2072	3	FSM	ENSG00000120833.14	ENST00000549206.5	2072	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	168.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TGTATTAAATAAAAAAAACC	93570254	True	NA	-15	True	NA	NA	NA	93570398	93576174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93570666_93572684_93573037_93574721
transcript_35157.known	chr12	+	1065	3	FSM	ENSG00000120833.14	ENST00000536696.6	1065	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	135.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGTCTCACATAGAGTAT	93570114	True	NA	NA	False	TATAAA	-31	NA	93570979	93575197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93571217_93572684_93573037_93574721
transcript_35158.known	chr12	+	2391	3	FSM	ENSG00000120833.14	ENST00000549122.5	2391	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	122	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACTTATTGAGTTCTA	93571346	False	NA	17	True	AATAAA	-20	NA	93571360	93576206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93571915_93572684_93573037_93574721
transcript_35163.known	chr12	+	984	3	FSM	ENSG00000120833.14	ENST00000549887.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	156	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGCAGCATCTCTGTAGG	93569915	True	NA	NA	False	NA	NA	NA	93571899	93575066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93572187_93572684_93573037_93574721
transcript_35167.known	chr12	-	3325	3	FSM	ENSG00000246985.8	ENST00000499137.6	3325	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCCGTAGGTATCTGTGT	-93571580	True	NA	-5	True	AATAAA	-25	NA	93571768	93542462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_93545359_93566743_93566971_93571566
transcript_35168.known	chr12	+	839	3	FSM	ENSG00000169372.13	ENST00000552983.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGGTTATTCTTTTTTG	93676836	True	NA	NA	False	AATAAA	-24	NA	93677374	93738636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93677473_93678768_93679073_93738199
transcript_35171.known	chr12	+	1189	3	FSM	ENSG00000169372.13	ENST00000332896.8	1189	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	8	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACCGTGTTGGGTTTTTTT	93676836	True	NA	39	True	AATAAA	-41	NA	93677374	93850756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93677473_93678768_93679073_93849969
transcript_35173.known	chr12	+	622	3	FSM	ENSG00000169372.13	ENST00000552033.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTGTAACCTTTGGTT	93676838	True	NA	NA	False	AATAAA	-13	NA	93677376	93738625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_93677473_93678768_93679073_93738403
transcript_35174.nnic	chr12	+	1184	8	NNC	ENSG00000136040.9	novel	610	2	NA	NA	-761	-5235	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.76126114370542	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGTGGTTTTATATCAT	94264293	True	NA	NA	False	AGTAAA	-15	NA	94264369	94299090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_94264471_94265078_94265226_94279471_94279650_94282297_94282402_94294485_94294541_94297188_94297221_94297315_94297424_94298631
transcript_35180.known	chr12	-	3686	17	FSM	ENSG00000173588.16	ENST00000397809.10	3686	17	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_3	30.2932928839042	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTGAAAAAAAAAAAAGACAG	-94457484	True	NA	NA	False	AATAAA	-22	NA	94459867	94307697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
transcript_35183.known	chr12	-	3130	16	FSM	ENSG00000173588.16	ENST00000339839.9	3130	16	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_3	24.8554934683574	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTGTTTAATTTTACAT	-94457563	True	NA	0	True	ATTAAA	-20	NA	94459946	94308279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94308918_94309917_94310108_94312913_94313018_94331699_94331830_94333481_94333640_94335588_94335665_94367793_94367944_94368056_94368202_94369921_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94459556
transcript_35191.known	chr12	-	3122	9	FSM	ENSG00000173588.16	ENST00000547575.5	3122	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_7	32.8671568590896	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTCTGAGTTTTAGCCT	-94457569	True	NA	-5	True	AATAAA	-15	NA	94459952	94368397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94370037_94375885_94376018_94378790_94379043_94400849_94400982_94403169_94403263_94411696_94411848_94412317_94412592_94435274_94435328_94459556
transcript_35192.known	chr12	+	2482	1	FSM	ENSG00000278916.1	ENST00000623122.1	2482	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATGCCAATAAATTCAG	94459874	True	NA	NA	False	ATTAAA	-17	NA	94460002	94462484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_94460000_94462500
transcript_35199.known	chr12	-	562	4	FSM	ENSG00000184752.14	ENST00000327772.7	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	2966	junction_1	623.193032338741	15048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-94991544	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94994169_94994258_95002738_95002822_95003594
transcript_3520.nic	chr1	-	1705	15	ISM	ENSG00000158161.16	ENST00000373863.3	1729	17	-138	11206	-65	0	5prime_fragment	FALSE	canonical	3	58	junction_13	12.050277327658	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCACCTATTATTTTCTA	-28086234	True	NA	-17	True	AATAAA	-14	NA	28088702	27988478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_27988657_27989696_27989812_27993399_27993561_27997319_27997379_27999959_28000050_28004335_28004420_28010946_28011087_28013110_28013295_28017153_28017240_28035543_28035681_28038838_28038906_28042570_28042651_28048382_28048427_28057993_28058095_28088523
transcript_35200.known	chr12	-	276	3	FSM	ENSG00000184752.14	ENST00000547157.1	276	3	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	1694.5	3240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTCTTTCGTGCCTTTTT	-94991547	True	NA	NA	False	ATTAAA	-16	NA	95003700	94971331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971486_95002805_95002822_95003594
transcript_35201.known	chr12	-	487	3	FSM	ENSG00000184752.14	ENST00000547986.5	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	2031	1735	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAATGTCTTTCGTGCCT	-94991560	True	NA	NA	False	ATTAAA	-12	NA	95003713	94971335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_95002738_95002822_95003594
transcript_35202.known	chr12	-	708	5	FSM	ENSG00000184752.14	ENST00000684558.1	708	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1912.99882383654	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGTCTTTCGTGCCTTTT	-94991544	True	NA	NA	False	ATTAAA	-15	NA	95003697	94971332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94991826_94991973_94994169_94994258_95002738_95002822_95003594
transcript_35203.known	chr12	-	698	5	FSM	ENSG00000184752.14	ENST00000684171.1	698	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1909.83603681049	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTCGTGCCTTTTTGCCC	-94991560	True	NA	NA	False	ATTAAA	-20	NA	95003713	94971327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_94971621_94974170_94974286_94994169_94994258_95002738_95002822_95003594
transcript_35204.known	chr12	-	4058	14	FSM	ENSG00000120798.17	ENST00000333003.10	4058	14	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	18.0128159503599	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTATCCTTCGTT	-95069410	True	NA	NA	False	AATATA	-20	NA	95073618	95020228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_35209.nic	chr12	-	2825	13	NIC	ENSG00000120798.17	novel	4058	14	NA	NA	0	0	intron_retention	FALSE	canonical	3	109	junction_3	17.9513230710162	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069410	True	NA	-3	True	AATAAA	-20	NA	95073618	95021892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_95022404_95025149_95025256_95028386_95028525_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_3522.nic	chr1	-	999	3	ISM	ENSG00000158161.16	ENST00000471498.5	1806	17	-37	59161	3	-36844	5prime_fragment	FALSE	canonical	3	58	junction_1	12	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAAAGAGGCAGCTTGTT	-28086166	True	NA	NA	False	NA	NA	NA	28088634	28047639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_28048427_28057993_28058095_28088523
transcript_35225.known	chr12	-	1822	12	FSM	ENSG00000120798.17	ENST00000393101.7	1822	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	43.3282684049941	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCTTCAGTTTTTTTCT	-95069372	True	NA	0	True	AATAAA	-26	NA	95073580	95030408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95030630_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_35226.known	chr12	-	2014	12	FSM	ENSG00000120798.17	ENST00000330677.7	2014	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	45.5074237881547	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACTTTATTCTGCTTCAG	-95069329	True	NA	-9	True	AATAAA	-17	NA	95073537	95030417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95030874_95031348_95031489_95040475_95040598_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95057879_95058309_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_3523.known	chr1	-	297	1	FSM	ENSG00000240750.3	ENST00000476501.3	297	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAATGTG	-28032168	False	NA	NA	False	NA	NA	NA	28032180	28031883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28031900_28032200
transcript_3524.nnic	chr1	-	492	2	Genic_Genomic	ENSG00000228589.3	novel	681	1	NA	NA	-32	15	multi-exon	FALSE	canonical	3	55	junction_1	0	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTTTCTCCTGGATCT	NA	False	NA	NA	False	AATAAA	-20	NA	28096454	28095726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_28095989_28096224
transcript_35240.nic	chr12	-	1019	5	ISM	ENSG00000120798.17	ENST00000393101.7	1822	12	-129	27763	-81	181	5prime_fragment	FALSE	canonical	3	146	junction_4	12.871965661856	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTATGTACTTTTTTATT	-95073699	False	NA	NA	False	AATATA	-13	NA	95073709	95058171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_35241.known	chr12	-	2499	11	FSM	ENSG00000120798.17	ENST00000552861.5	2499	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	48.3517321302971	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTCTAGTCATATTTA	-95069361	True	NA	-3	True	AATAAA	-20	NA	95073569	95021892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95022404_95025149_95025256_95028386_95028510_95049067_95049234_95051761_95051944_95057552_95057644_95057730_95058490_95059905_95059985_95062507_95062739_95067330_95067392_95073379
transcript_35243.known	chr12	+	2712	13	FSM	ENSG00000028203.19	ENST00000552660.5	2712	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	90.1241042489004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCAATCTTGGAAATTCTT	95214234	True	NA	8	True	AATAAA	-26	NA	95217811	95300921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_35244.known	chr12	+	3002	13	FSM	ENSG00000028203.19	ENST00000547997.5	3002	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	88.7716718453709	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGATGTGTGCTGGGGTTTG	95214183	True	NA	14	True	AATAAA	-18	NA	95217760	95301172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95256549_95256623_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_3525.known	chr1	-	681	1	FSM	ENSG00000228589.3	ENST00000436160.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	646	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTCTAAAAGTAGCCCT	-28096394	False	NA	NA	False	AATAAA	-5	NA	28096422	28095741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28095700_28096400
transcript_35251.known	chr12	+	2362	12	FSM	ENSG00000028203.19	ENST00000551994.5	2362	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	92.9803142765995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGATAGAAGAAAAGTAAG	95214240	True	NA	NA	False	AATAAA	-3	NA	95217817	95300654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95257153_95257240_95262905_95263082_95266356_95266633_95270038_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_35254.known	chr12	+	4510	12	FSM	ENSG00000028203.19	ENST00000436874.6	4510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	76.1009551313308	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTTCTTGCCATGA	95214229	True	NA	103	True	AATAAA	-23	NA	95217806	95302799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95217887_95251939_95252072_95257149_95257240_95262905_95263082_95266356_95266633_95270050_95270189_95274741_95274890_95282312_95282645_95287663_95287858_95294271_95294373_95296050_95296259_95300164
transcript_3526.known	chr1	-	1539	2	FSM	ENSG00000169403.12	ENST00000305392.3	1539	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTAGTTCTCCCCGATGGGG	-28193781	True	NA	NA	False	TTTAAA	-4	NA	28193873	28149672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28151060_28193721
transcript_35262.nnic	chr12	+	352	3	NIC	ENSG00000028203.19	novel	608	6	NA	NA	0	-10062	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	2	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTAAGACTCTAATGGG	95214229	True	NA	NA	False	AATAAA	-37	NA	95217806	95242378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_95217887_95224179_95224237_95242163
transcript_35263.nic	chr12	+	334	2	ISM	ENSG00000028203.19	ENST00000549589.5	571	6	2	14823	2	-10082	5prime_fragment	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGAGACTATTAGATAGAA	95214170	True	NA	NA	False	AATAAA	-17	NA	95217747	95242358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_95217887_95242163
transcript_35264.nic	chr12	+	810	2	ISM	ENSG00000028203.19	ENST00000549589.5	571	6	59	14290	-2	-9549	5prime_fragment	FALSE	canonical	2	7	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCAGTAAAATGATAT	95214227	True	NA	NA	False	NA	NA	NA	95217804	95242891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_95217887_95242163
transcript_35265.nic	chr12	+	535	2	ISM	ENSG00000028203.19	ENST00000550106.5	3349	16	-114	58801	109	-10069	5prime_fragment	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGAAGTTTGTAAGACTC	95214373	False	NA	NA	False	AATAAA	-30	NA	95217950	95242371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_95218278_95242163
transcript_35272.known	chr12	+	1874	11	FSM	ENSG00000111142.14	ENST00000551840.5	1874	11	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	188.79872880928	1426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTTTCAGATCTGAGAG	95464216	True	NA	27	True	AATAAA	-1	NA	95474161	95514326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476073_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_35275.known	chr12	+	1862	11	FSM	ENSG00000111142.14	ENST00000546753.5	1862	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	248.128515088452	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGGAATCCATTTTCTAAA	95474070	False	NA	0	True	NA	NA	NA	95474080	95514299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485947_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_35280.known	chr12	+	1836	10	FSM	ENSG00000111142.14	ENST00000261220.13	1836	10	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	305.40723672977	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	95464204	True	NA	43	True	AATAAA	-17	NA	95474149	95514342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476073_95476179_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95511894_95511999_95512800_95512917_95513651
transcript_35283.known	chr12	+	2431	10	FSM	ENSG00000111142.14	ENST00000535095.5	2431	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	248.909076562229	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCTACATCTCAATGTCT	NA	False	NA	43	True	AATAAA	-17	NA	95473519	95514342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95474331_95476070_95476179_95483214_95483281_95485878_95485982_95494055_95494218_95494956_95495139_95496003_95496099_95504064_95504162_95512800_95512917_95513651
transcript_3529.known	chr1	-	1600	10	FSM	ENSG00000126698.11	ENST00000489277.5	1600	10	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	1019.781797043	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTGATGTACTTTTC	-28209836	True	NA	23	True	AATAAA	-12	NA	28233025	28200558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28230130_28230253_28232920
transcript_35297.known	chr12	+	388	2	FSM	ENSG00000111142.14	ENST00000549136.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAAGTGGTTATTCACT	95476000	True	NA	NA	False	NA	NA	NA	95476070	95483494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95476179_95483214
transcript_35311.known	chr12	-	3161	6	FSM	ENSG00000136014.12	ENST00000393091.6	3161	6	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_5	278.039277800817	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAAAAATTATAGGGC	-95542272	True	NA	NA	False	AATAGA	-7	NA	95548844	95517275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95548770
transcript_35312.known	chr12	-	4008	6	FSM	ENSG00000136014.12	ENST00000258499.8	4008	6	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_5	253.02442569839	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTCTACTCTTTTCTA	-95545579	True	NA	-2	True	ATTAAA	-21	NA	95551476	95516559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95518354_95520996_95521203_95524679_95524789_95528806_95529003_95532828_95534327_95551271
transcript_35334.nic	chr12	-	727	2	ISM	ENSG00000136014.12	ENST00000393091.6	3161	6	-21	16419	-21	69	5prime_fragment	FALSE	canonical	3	265	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGTAAAGAAAAGACGG	-95542293	True	NA	NA	False	AGTAAA	-3	NA	95548865	95533694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_95534327_95548770
transcript_35347.nnic	chr12	+	1025	6	NNC	ENSG00000257150.4	novel	2148	5	NA	NA	-17	75247	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.48711915483254	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	95550938	True	NA	NA	False	AATAAA	-22	NA	95551564	95749246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_95551801_95649327_95649407_95665682_95665777_95737844_95737913_95740159_95740329_95748867
transcript_35354.nnic	chr12	+	1093	5	NNC	ENSG00000257150.4	novel	2148	5	NA	NA	-17	66776	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.8405728739343	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTTGTGAGTATTCTT	95550938	True	NA	NA	False	TATAAA	-21	NA	95551564	95740775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_95551801_95649327_95649407_95665682_95665777_95737844_95737913_95740159
transcript_35364.nnic	chr12	+	686	2	Antisense	novelGene_ENSG00000074527.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTTGTGAGTATTCTT	NA	False	NA	NA	False	TATAAA	-21	NA	95737842	95740775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_95737913_95740159
transcript_35366.known	chr12	-	764	2	FSM	ENSG00000074527.13	ENST00000674466.1	764	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAATGTGTAGTCATTT	NA	False	NA	NA	False	CATAAA	-18	NA	95791189	95786782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95787469_95791111
transcript_35367.known	chr12	-	396	2	FSM	ENSG00000258343.2	ENST00000551893.1	396	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAATCTCACTAGTTTTT	-95858771	True	NA	NA	False	ATTAAA	-22	NA	95858798	95858236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_95858588_95858753
transcript_35379.known	chr12	+	1389	4	FSM	ENSG00000139343.11	ENST00000266735.10	452	4	-24	-913	-24	602	multi-exon	FALSE	canonical	3	5074	junction_3	182.93411078552	16636	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTCTTACTGCTTTT	95779309	True	NA	NA	False	AATACA	-19	NA	95858927	95867053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_95859077_95861167_95861294_95865323_95865389_95866004
transcript_35381.known	chr12	-	2140	19	FSM	ENSG00000111144.10	ENST00000228740.7	2140	19	0	0	0	0	multi-exon	TRUE	canonical	3	1035	junction_13	124.224023540905	1474	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAATTTTCTCTCAGTAT	-96011596	True	NA	-4	True	ATTAAA	-20	NA	96035587	96000752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_96001107_96002959_96003065_96003837_96003921_96006313_96006410_96009093_96009149_96013187_96013259_96013749_96013854_96014854_96015000_96015582_96015695_96017043_96017115_96017556_96017581_96018762_96018904_96019167_96019241_96021084_96021138_96022146_96022252_96024478_96024548_96027443_96027565_96029054_96029186_96035360
transcript_35382.known	chr12	+	4201	5	FSM	ENSG00000111145.8	ENST00000228741.8	4201	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	6.94172168845741	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGAGGTAACTGGATTGG	96193154	True	NA	17	True	AATAAA	-20	NA	96194374	96269824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96194706_96223564_96223774_96246939_96247735_96259730_96259854_96267081
transcript_35390.known	chr12	+	4015	16	FSM	ENSG00000139350.12	ENST00000266742.9	4015	16	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	51.4230385030765	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTGTCAGATATTGATCC	96903455	True	NA	6	True	ATTAAA	-18	NA	96907256	96953780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907301_96907603_96907857_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_35394.known	chr12	+	3366	15	FSM	ENSG00000139350.12	ENST00000429527.6	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	62.0998208942831	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGTGGTTTATAGCAT	96903422	True	NA	19	True	AATAAA	-20	NA	96907223	96953351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907301_96909751_96909896_96912722_96912818_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_35396.known	chr12	+	2490	14	FSM	ENSG00000139350.12	ENST00000411739.6	2490	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	60.2003558148678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAATTTTAAAATGGCA	96903436	True	NA	NA	False	TTTAAA	-31	NA	96907237	96952475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_96907301_96907603_96907857_96917620_96917738_96919984_96920126_96934975_96935206_96936610_96936813_96937197_96937394_96940408_96940538_96942576_96942625_96943559_96943763_96944638_96944796_96945692_96945850_96951431_96951499_96951948
transcript_3540.known	chr1	-	1763	9	FSM	ENSG00000126698.11	ENST00000263697.6	1763	9	0	0	0	0	multi-exon	FALSE	canonical	3	2188	junction_2	233.390465475777	3840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCCAGCTCACAGTCTAT	-28209840	True	NA	NA	False	ATTAAA	-18	NA	28233029	28200277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28201371_28203746_28203823_28205257_28205350_28208341_28208414_28209971_28210067_28210570_28210638_28214939_28214997_28228921_28229024_28232920
transcript_35407.known	chr12	+	1587	10	FSM	ENSG00000255794.10	ENST00000662502.1	1587	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	11.4901997962622	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTTGTTATCTTTTGT	97465703	False	NA	6	True	AATAAA	-3	NA	97465720	97565023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493180_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796_97561048_97564737
transcript_35409.nic	chr12	+	2284	10	NIC	ENSG00000255794.10	novel	2690	10	NA	NA	-4	0	intron_retention	FALSE	canonical	3	6	junction_9	10.5666608248611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATTATTTTTGTTA	97465062	False	NA	-2	True	AATGAA	-7	NA	97465088	97565015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149_97564329_97564737
transcript_35413.known	chr12	+	1736	9	FSM	ENSG00000255794.10	ENST00000663509.1	1736	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	10.9971587239614	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAGCAGAAAATGAGAAAGTA	97462765	True	NA	NA	False	AAGAAA	-16	NA	97465206	97560964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493890_97494003_97494694_97494882_97495930_97496057_97530654_97530860_97560536_97560699_97560796
transcript_35414.known	chr12	+	2632	9	FSM	ENSG00000255794.10	ENST00000660138.1	2632	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	9.24662100445346	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	97462728	True	NA	18	True	AATAAA	-15	NA	97465169	97565035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493176_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796_97561048_97564149
transcript_35420.known	chr12	+	1125	8	FSM	ENSG00000255794.10	ENST00000548886.2	1125	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	10.5926428068095	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGCTCGTGCTGTGAAT	97465703	False	NA	NA	False	AAGAAA	-33	NA	97465720	97560981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97465728_97492460_97492607_97493180_97493286_97493874_97494003_97494694_97494882_97530654_97530860_97560536_97560699_97560796
transcript_35425.known	chr12	+	687	1	FSM	ENSG00000255794.10	ENST00000547946.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTCTATTTCCTTTA	97564337	False	NA	18	True	AATAAA	-15	NA	97564348	97565035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_97564300_97565000
transcript_35430.nnic	chr12	-	491	5	NNC	ENSG00000245017.3	novel	1828	4	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.12132034355964	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAGTTTGGGTTCTGAT	-98503780	True	NA	NA	False	ATTAAA	-23	NA	98503855	98486972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_98487189_98490993_98491089_98493430_98493485_98502582_98502613_98503759
transcript_35431.nnic	chr12	-	449	4	NNC	ENSG00000245017.3	novel	1828	4	NA	NA	-16	10994	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.44948974278318	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTACTGATTTTACATAGAG	-98503799	True	NA	NA	False	AATAAA	-15	NA	98503874	98474549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_98474800_98493430_98493485_98502582_98502613_98503759
transcript_35432.nnic	chr12	-	407	4	NNC	ENSG00000245017.3	novel	1828	4	NA	NA	429	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.62466929133727	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAGTTTGGGTTCTGAT	-98503354	False	NA	NA	False	ATTAAA	-23	NA	98503429	98486972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_98487189_98493430_98493485_98502582_98502613_98503322
transcript_35433.known	chr12	-	1825	4	FSM	ENSG00000245017.3	ENST00000501499.2	1828	4	3	0	3	0	multi-exon	FALSE	canonical	2	3	junction_3	1.69967317119759	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGAATAGCTCATCTTTTC	-98503780	True	NA	NA	False	AATAAA	-15	NA	98503855	98485543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98487189_98493430_98493485_98502582_98502613_98503759
transcript_35434.known	chr12	-	309	2	FSM	ENSG00000245017.3	ENST00000549004.1	309	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTAGTTTGGGTTCTGAT	-98491052	True	NA	NA	False	ATTAAA	-23	NA	98491086	98486972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98487189_98490993
transcript_35435.nnic	chr12	+	3570	10	NNC	ENSG00000120802.14	novel	4136	9	NA	NA	-10	0	intron_retention	FALSE	canonical	3	4	junction_9	216.363263352158	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTCTGGATAACAT	98483660	True	NA	53	True	AATAAA	-21	NA	98515568	98550351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572_98548829_98549415
transcript_35440.known	chr12	+	4136	9	FSM	ENSG00000120802.14	ENST00000556029.6	4136	9	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_6	184.817097085199	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGATTTCTGGATAACAT	98483681	True	NA	53	True	AATAAA	-21	NA	98515589	98550351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544229_98544350_98544441_98544538_98544950_98545062_98546358_98546448_98547572
transcript_35442.known	chr12	+	2465	8	FSM	ENSG00000120802.14	ENST00000343315.9	2465	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	235.250279229486	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACAAAAAGGGCCAGGCGC	98483709	True	NA	NA	False	NA	NA	NA	98515617	98548828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98544441_98544538_98544950_98545062_98546358_98546448_98547572
transcript_35445.known	chr12	+	2374	6	FSM	ENSG00000120802.14	ENST00000393053.6	2374	6	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	256.129342325318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATACAAAAAAATTAGCT	98483722	True	NA	NA	False	NA	NA	NA	98515630	98548957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474_98537573_98546358_98546448_98547572
transcript_35446.known	chr12	+	3615	4	FSM	ENSG00000120802.14	ENST00000266732.8	3615	4	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	184.028983224563	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTGGTCTCCAGAAACA	98483721	True	NA	30	True	AATAAA	-21	NA	98515629	98535634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98532822
transcript_35447.known	chr12	+	820	4	FSM	ENSG00000120802.14	ENST00000261210.9	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_3	185.912763293851	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAACTTTGTGGGTTTTG	98515788	False	NA	NA	False	AATAAA	-31	NA	98515851	98537713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98516147_98527885_98528013_98531679_98531839_98537474
transcript_35448.nic	chr12	+	860	3	ISM	ENSG00000120802.14	ENST00000266732.8	3615	4	-61	3800	-10	55	5prime_fragment	FALSE	canonical	3	718	junction_1	10	1886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGTAAAATTTTAAATGA	98483660	True	NA	NA	False	AATGAA	-1	NA	98515568	98531834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_98516147_98527885_98528013_98531679
transcript_35459.known	chr12	+	1285	8	FSM	ENSG00000075415.15	ENST00000549338.5	1285	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1034.70060739268	13188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTACTGTTGAAATAAAC	98549623	True	NA	-18	True	NA	NA	NA	98593695	98601674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98593745_98593974_98594136_98595726_98595849_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_35460.known	chr12	+	556	4	FSM	ENSG00000075415.15	ENST00000547534.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	2176	junction_1	341.696096293508	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGACTTTCCGAGTGTTCT	98549613	True	NA	NA	False	TTTAAA	-20	NA	98593685	98598073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98593741_98593974_98594136_98595726_98595849_98597855
transcript_35461.known	chr12	+	1417	8	FSM	ENSG00000075415.15	ENST00000551123.5	1417	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	1439.62235694374	2413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCCTGTGACTTATTTT	98549623	True	NA	15	True	AATAAA	-15	NA	98593695	98601707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_98593741_98593978_98594136_98595432_98595662_98597855_98598036_98598521_98598704_98599954_98600128_98601170_98601282_98601367
transcript_35467.known	chr12	-	1645	3	FSM	ENSG00000166130.15	ENST00000342502.6	1645	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	56.5	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	NA	False	NA	-14	True	AATAAA	-45	NA	98645113	98613404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98614341_98634295_98634414_98644522
transcript_35469.known	chr12	-	2902	3	FSM	ENSG00000166130.15	ENST00000299157.5	2902	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	29.5	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAACTTTGTTGTTTTA	-98642507	True	NA	NA	False	AATAAA	-17	NA	98644788	98624248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98626767_98634295_98634414_98644522
transcript_35476.known	chr12	-	1368	2	FSM	ENSG00000166130.15	ENST00000393042.3	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTGCAACTTTACATAG	-98644940	False	NA	-14	True	AATAAA	-45	NA	98644954	98613404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_98614341_98644522
transcript_35479.nic	chr12	+	825	2	ISM	ENSG00000120868.14	ENST00000547743.1	651	3	-505	459	-124	-459	5prime_fragment	FALSE	canonical	3	69	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAGGAAAAAGTAAGAAA	98643197	True	NA	11	True	NA	NA	NA	98645165	98648473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_98645836_98648318
transcript_35480.known	chr12	-	5198	21	FSM	ENSG00000111647.13	ENST00000279907.12	5198	21	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	15.9620644028271	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCACCCTACTGAACTTA	-100139390	True	NA	-19	True	AATAAA	-26	NA	100142874	100037071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100037756_100039595_100039790_100047529_100047639_100047942_100048197_100050167_100050319_100051078_100051222_100057570_100057747_100058028_100059534_100059849_100060044_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_35482.known	chr12	-	2023	13	FSM	ENSG00000111647.13	ENST00000356828.7	2023	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	33.2293168753136	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAAATTTTATTCTA	-100139363	True	NA	NA	False	AATAAA	-21	NA	100142847	100069907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100070170_100072671_100072814_100083015_100083135_100084475_100084659_100086274_100086359_100088914_100089096_100095666_100095838_100097364_100097506_100098351_100098542_100102765_100102858_100103912_100103952_100108385_100108549_100142591
transcript_35483.nic	chr12	-	638	4	ISM	ENSG00000111647.13	ENST00000356828.7	2023	13	-30	32800	-3	1227	5prime_fragment	FALSE	canonical	3	128	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGCCTTAACCTCAA	-100139393	True	NA	NA	False	ATTAAA	-10	NA	100142877	100102707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_100102858_100103912_100103952_100108385_100108549_100142591
transcript_35484.known	chr12	-	1750	1	FSM	ENSG00000280088.1	ENST00000623268.1	1750	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGGATGTTTTTCAGATA	NA	False	NA	-6	True	AATAAA	-17	NA	100034074	100032324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100032300_100034100
transcript_35486.known	chr12	+	1877	11	FSM	ENSG00000075089.10	ENST00000546902.5	1877	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	95.7843411002028	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTGGGCAGAATATCTT	100198241	True	NA	9	True	AATAAA	-17	NA	100200815	100224424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_35487.known	chr12	+	1715	11	FSM	ENSG00000075089.10	ENST00000551617.1	1715	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	123.104021055366	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTTGTACCTAGAGTA	100198276	True	NA	-58	True	NA	NA	NA	100200850	100224357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100201061_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_3550.known	chr1	+	503	3	FSM	ENSG00000130770.18	ENST00000335514.10	503	3	0	0	0	0	multi-exon	FALSE	canonical	3	3943	junction_2	212	64091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTTGATGCCTTCTTC	28179949	True	NA	13	True	AATAAA	-15	NA	28236123	28238100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360_28236453_28237836
transcript_35509.known	chr12	-	768	5	FSM	ENSG00000166153.17	ENST00000299185.12	768	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	7.53325958665968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGAACATTAGAGAAGAA	-100266479	True	NA	NA	False	NA	NA	NA	100267079	100252479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100252537_100253488_100253716_100256048_100256227_100262263_100262410_100266919
transcript_3551.known	chr1	+	599	3	FSM	ENSG00000130770.18	ENST00000497986.5	599	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2183.5	3760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGCCTTCTTCTATCT	28179934	True	NA	18	True	AATAAA	-20	NA	28236108	28238105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360_28236453_28237760
transcript_35511.known	chr12	-	1155	5	FSM	ENSG00000166153.17	ENST00000416321.5	1155	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	9.80752262296652	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTTTTGCAAGCCAAATC	-100266479	True	NA	NA	False	AATAAA	-28	NA	100267079	100252262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100263496_100263894_100266919
transcript_35516.known	chr12	-	541	4	FSM	ENSG00000166153.17	ENST00000549341.1	541	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	9.20144916122817	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCTGAACATTAGAGAAGAA	-100266479	True	NA	NA	False	NA	NA	NA	100267079	100252479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100252537_100256048_100256227_100262263_100262410_100266919
transcript_3552.known	chr1	+	539	3	FSM	ENSG00000130770.18	ENST00000468425.2	539	3	0	0	0	0	multi-exon	FALSE	canonical	2	130	junction_2	2118.5	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAACGATTGATTGATTGA	28179967	True	NA	NA	False	AATAAA	-34	NA	28236141	28246906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360_28236453_28246588
transcript_35520.known	chr12	-	1033	4	FSM	ENSG00000166153.17	ENST00000551642.1	1033	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	4.98887651569859	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCACTGGAAATCAGAGTG	-100266455	True	NA	NA	False	AATAAA	-22	NA	100267055	100255872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_100256227_100262263_100262410_100263496_100263894_100266919
transcript_35529.known	chr12	+	1659	11	FSM	ENSG00000075089.10	ENST00000552376.5	1659	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	93.2448389992712	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGGGCAGAATAT	100198255	True	NA	6	True	AATAAA	-14	NA	100200829	100224421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205745_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220067_100220147_100223785
transcript_3553.known	chr1	+	1855	2	FSM	ENSG00000130770.18	ENST00000465645.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	3	4367	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTTTGATGCCTTCT	28179979	True	NA	11	True	AATAAA	-13	NA	28236153	28238098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28236271_28236360
transcript_35530.known	chr12	+	1747	11	FSM	ENSG00000075089.10	ENST00000548180.5	1747	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	98.1396963516802	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGTGTGGGCAGAATATCT	100198242	True	NA	8	True	AATAAA	-16	NA	100200816	100224423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100200920_100204939_100205058_100205675_100205758_100207662_100207787_100210072_100210209_100210294_100210352_100212255_100212355_100212449_100212529_100218414_100218587_100220007_100220147_100223785
transcript_35531.known	chr12	+	3948	19	FSM	ENSG00000136021.19	ENST00000635101.1	3948	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	34.5092580170726	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGCAGTTGTATCTTCTG	100265135	True	NA	7	True	AATAAA	-18	NA	100267245	100340139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100267397_100282942_100283148_100291502_100291661_100298030_100298176_100311043_100311194_100312431_100312654_100313421_100313539_100314488_100314615_100315557_100315735_100317680_100317693_100317802_100317926_100323524_100323639_100326621_100326755_100329200_100329320_100334165_100334267_100335624_100335692_100335810_100335907_100337386_100337507_100338527
transcript_35533.known	chr12	+	2218	9	FSM	ENSG00000139354.11	ENST00000266754.9	2218	9	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_3	7.33037345569787	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATACATACTCATTATAAAAA	100572567	True	NA	NA	False	AAGAAA	-13	NA	100573682	100624890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100573786_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_35535.known	chr12	+	5736	10	FSM	ENSG00000139354.11	ENST00000547754.6	5736	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.3388376105793	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGGTCTCAGTTTGCTTT	100572568	True	NA	11	True	ATTAAA	-16	NA	100573683	100628288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100573786_100591735_100591857_100594874_100594923_100600381_100600551_100601637_100601754_100611999_100612142_100617743_100617808_100618448_100618588_100622274_100622383_100623561
transcript_35536.known	chr12	+	4033	28	FSM	ENSG00000151572.18	ENST00000392977.8	4033	28	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.43938871112224	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTCAGCTGGCTCTTCT	100794765	True	NA	NA	False	AATAAA	-28	NA	100794775	101128629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_100795028_100901645_100901841_100922225_100922331_100939314_100939452_100942376_100942536_100971305_100971407_100974844_100974890_100987538_100987671_101020033_101020141_101037094_101037151_101039954_101040077_101042333_101042469_101043538_101043636_101048340_101048402_101079192_101079276_101083677_101083819_101086659_101086825_101094255_101094293_101096535_101096648_101097650_101097709_101097847_101097946_101099577_101099721_101110403_101110557_101111562_101111711_101116678_101116799_101120519_101120626_101126878_101127075_101127860
transcript_35537.known	chr12	+	1585	8	FSM	ENSG00000120800.5	ENST00000551825.1	1585	8	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_6	10.4841960753764	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGGGAGGGTGAGGCAG	101275864	True	NA	NA	False	AATACA	-27	NA	101280127	101291427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101280328_101281115_101281197_101285569_101285637_101285748_101285882_101286320_101286510_101288959_101289042_101290136_101290275_101290732
transcript_3554.known	chr1	+	3462	10	FSM	ENSG00000130766.5	ENST00000253063.4	3462	10	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_3	18.8882352828094	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTTTTTATGGGCTGTT	28257584	True	NA	25	True	AATAAA	-25	NA	28259517	28282491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28259938_28269182_28269249_28271673_28271872_28272283_28272467_28272580_28272794_28273357_28273509_28274039_28274159_28274824_28275016_28279096_28279242_28280715
transcript_35542.known	chr12	-	1231	5	FSM	ENSG00000120805.14	ENST00000539055.5	1231	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	237.49157879807	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCACCTGCTAGCTTGTAA	-101397784	True	NA	NA	False	NA	NA	NA	101407746	101394917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101407641
transcript_35547.known	chr12	-	470	3	FSM	ENSG00000120805.14	ENST00000551688.1	470	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGTTGGAGGGATAA	-101397787	True	NA	NA	False	AGTAAA	-13	NA	101407749	101395487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101395671_101396398_101396578_101407641
transcript_35549.known	chr12	-	3197	6	FSM	ENSG00000120805.14	ENST00000261636.13	3197	6	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_5	32.5392071200268	1958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTGTCCTTTCTGATC	-101397810	True	NA	-15	True	AATAAA	-42	NA	101407772	101393115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101395671_101396398_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_35550.known	chr12	-	879	5	FSM	ENSG00000120805.14	ENST00000551671.5	879	5	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_4	35.1167694983465	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATTCCTTATCCTTCAGG	-101397791	True	NA	NA	False	NA	NA	NA	101407753	101396142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101396578_101401061_101401174_101402864_101402947_101405843_101405982_101407641
transcript_35551.known	chr12	-	566	2	FSM	ENSG00000257514.5	ENST00000547027.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTCTTTTCTTTATTG	NA	False	NA	NA	False	AATAAA	-19	NA	101659970	101646719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101647029_101659713
transcript_35552.known	chr12	+	1572	9	FSM	ENSG00000111666.11	ENST00000229266.8	1572	9	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_8	16.6508258053467	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTATTTTTTCAATTTCA	101696163	True	NA	10	True	AATAAA	-22	NA	101697639	101729074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101698135_101714089_101714238_101714503_101714646_101716727_101716813_101720122_101720255_101723167_101723327_101723721_101723848_101726293_101726405_101728900
transcript_35554.known	chr12	-	1119	9	FSM	ENSG00000139351.15	ENST00000392924.2	1119	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.484122918275927	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGCTTCATTGTATCT	-101739450	False	NA	NA	False	AATAAA	-16	NA	101739462	101728647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101728981_101729108_101729214_101731567_101731667_101733574_101733675_101734926_101735045_101737036_101737072_101737231_101737299_101737802_101737953_101739350
transcript_35555.known	chr12	-	1068	9	FSM	ENSG00000139351.15	ENST00000266743.6	1068	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.484122918275927	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGCTTCATTGTATCT	-101739414	False	NA	NA	False	AATAAA	-16	NA	101739426	101728647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_101728981_101729108_101729214_101731567_101731667_101733574_101733675_101734926_101735045_101737036_101737072_101737231_101737299_101737802_101737949_101739361
transcript_35557.known	chr12	+	3279	7	FSM	ENSG00000136048.14	ENST00000258534.13	3279	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	6.86577664134866	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGCCTGGTAATGTTGACTG	101877001	True	NA	4	True	AATAAA	-14	NA	101877579	101923612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_101877921_101897862_101897931_101901290_101901434_101908185_101908364_101914173_101914233_101920108_101920202_101921215
transcript_35565.known	chr12	-	945	8	FSM	ENSG00000120860.11	ENST00000544341.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	59.9183117388387	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	-102060723	True	NA	0	True	AATAAA	-18	NA	102062073	102012941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102013193_102017719_102017806_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_35567.known	chr12	-	921	8	FSM	ENSG00000120860.11	ENST00000535501.5	921	8	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_6	60.7094115690576	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTATGTCTTGTTGCTAAA	-102060684	True	NA	-2	True	AATAAA	-16	NA	102062034	102012943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102050188_102050292_102061247_102061347_102061911
transcript_35576.known	chr12	-	865	7	FSM	ENSG00000120860.11	ENST00000545679.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	41.0365690573664	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCTTGTTGCTAAAAT	-102060729	True	NA	0	True	AATAAA	-18	NA	102062079	102012941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102013193_102025973_102026039_102039867_102039976_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_3558.nnic	chr1	+	1330	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	-67	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	27.178422814186	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28328922	False	NA	8	True	AATAAA	-14	NA	28328934	28335965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329125_28330596_28330736_28334416_28335161_28335708
transcript_35584.known	chr12	-	569	6	FSM	ENSG00000120860.11	ENST00000541569.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	16.2554606209729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATAATAAAAATATTTCA	-102060628	True	NA	NA	False	AATATA	-33	NA	102061978	102025920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102026039_102039867_102039979_102044104_102044213_102046053_102046120_102061247_102061347_102061911
transcript_35586.known	chr12	-	289	3	FSM	ENSG00000120860.11	ENST00000536930.1	289	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	84	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATGAAAGCAACTTGTTT	-102060624	True	NA	NA	False	AATAAA	-24	NA	102061974	102059663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102059791_102061247_102061347_102061911
transcript_35588.known	chr12	-	2362	10	FSM	ENSG00000075188.9	ENST00000552283.6	2362	10	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_9	44.1540513080462	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGTATGTGTCTGTCACG	-102117251	True	NA	NA	False	AATAAA	-15	NA	102120114	102073102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362_102118584_102120049
transcript_35589.known	chr12	-	1203	9	FSM	ENSG00000075188.9	ENST00000251074.5	1203	9	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_6	33.7999630177312	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTATTTTTCTACTCT	-102115720	False	NA	-15	True	AATAAA	-15	NA	102118583	102074196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102074468_102075000_102075095_102076796_102076848_102077321_102077504_102085765_102085857_102099105_102099201_102101031_102101105_102112107_102112233_102118362
transcript_35590.known	chr12	+	1916	11	FSM	ENSG00000185480.12	ENST00000392911.6	1916	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	72.7646205239882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGTTTAAAAATACTAGT	102117175	True	NA	NA	False	NA	NA	NA	102120246	102196429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102148234_102148464_102153868_102153977_102164437_102164609_102165728_102165884_102175482_102175667_102178591_102178771_102182548_102182628_102195311_102195448_102195950
transcript_35608.known	chr12	+	835	5	FSM	ENSG00000185480.12	ENST00000392909.7	835	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	141.821190236156	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTCAGAACATTGAAGAAG	102117132	True	NA	NA	False	NA	NA	NA	102120203	102151823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102148229_102148464_102150263_102150372_102151569
transcript_35611.known	chr12	+	992	5	FSM	ENSG00000185480.12	ENST00000543784.5	992	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	121.688896371033	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGTAAATTATGATGATTT	102117123	True	NA	NA	False	TATAAA	-39	NA	102120194	102196368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102164437_102164609_102165728_102165884_102195950
transcript_35617.nic	chr12	+	1891	4	ISM	ENSG00000185480.12	ENST00000541394.5	2452	12	-19	43718	-17	937	5prime_fragment	FALSE	canonical	2	12	junction_3	129.184622407881	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAGAGGAGTTAAACAG	102117094	True	NA	NA	False	AGTAAA	-19	NA	102120165	102152949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_102120287_102123885_102124042_102148229_102148464_102151569
transcript_3562.nnic	chr1	+	1080	4	NNC	ENSG00000130772.14	novel	1106	4	NA	NA	0	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAATTCTGATTC	28326157	True	NA	10	True	AATAAA	-16	NA	28329001	28335967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28334920_28335708
transcript_35621.known	chr12	+	976	3	FSM	ENSG00000185480.12	ENST00000537257.5	976	3	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_2	21.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGTTTTGTCTACGTTA	102117173	True	NA	NA	False	ATTAAA	-20	NA	102120244	102149007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_102120287_102123885_102124042_102148229
transcript_35625.known	chr12	-	3759	13	FSM	ENSG00000171759.10	ENST00000553106.6	3759	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	2.32139804619735	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACCTTGACTTTATTTTC	-102916927	True	NA	NA	False	AATAAA	-21	NA	102917244	102836888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102839219_102840399_102840516_102843645_102843780_102844335_102844432_102846894_102846952_102851686_102851757_102852814_102852951_102855135_102855333_102866595_102866664_102877461_102877551_102894734_102894919_102912790_102912899_102917070
transcript_35626.known	chr12	-	652	4	FSM	ENSG00000171759.10	ENST00000550978.6	652	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	1.24721912892465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATTGTCTCTATATACTAG	-102916797	False	NA	NA	False	TATAAA	-15	NA	102917114	102877234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_102877551_102894734_102894919_102912790_102912899_102917070
transcript_35627.known	chr12	-	497	2	FSM	ENSG00000257681.1	ENST00000551299.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTAGCAGGAATGAACT	NA	False	NA	NA	False	ATTAAA	-17	NA	103766906	103746314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103746640_103766734
transcript_35630.known	chr12	+	2646	18	FSM	ENSG00000166598.16	ENST00000680316.1	2646	18	0	0	0	0	multi-exon	FALSE	canonical	2	78	junction_1	1347.6492489776	3967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103736183	False	NA	8	True	AATAAA	-11	NA	103930599	103947922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930623_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_3564.known	chr1	+	1106	4	FSM	ENSG00000130772.14	ENST00000398997.2	1106	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.24345659257	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGTCTGTGTAATTCTGA	28326210	True	NA	7	True	AATAAA	-13	NA	28329054	28335964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28329181_28330596_28330736_28334416_28335087_28335793
transcript_35649.known	chr12	-	685	3	FSM	ENSG00000204954.10	ENST00000552940.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	15	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGGGACTGAAAGAAAGAA	-103955052	True	NA	-110	True	NA	NA	NA	103957147	103951583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103956630
transcript_3565.nnic	chr1	+	1319	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326157	True	NA	8	True	AATAAA	-14	NA	28329001	28335965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335161_28335708
transcript_35650.known	chr12	-	463	3	FSM	ENSG00000204954.10	ENST00000547945.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	53.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGGAGGTGCTCAGTGGAT	-103957242	False	NA	54	True	NA	NA	NA	103957273	103951419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630_103956749_103957139
transcript_35651.known	chr12	-	660	3	FSM	ENSG00000204954.10	ENST00000553183.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	52.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAACGCGAAATAGAATATTT	-103965390	True	NA	-32	True	NA	NA	NA	103965708	103951281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630_103956749_103965515
transcript_35659.known	chr12	+	674	2	FSM	ENSG00000257327.1	ENST00000551650.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGATTATTAGACTTTTTA	103841369	True	NA	NA	False	AATAAA	-23	NA	103841450	103844664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103841635_103844174
transcript_3566.nnic	chr1	+	1497	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326157	True	NA	8	True	AATAAA	-14	NA	28329001	28335965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335205_28335574
transcript_35660.known	chr12	-	1446	2	FSM	ENSG00000204954.10	ENST00000549478.1	1446	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGCCATCTTTATTTC	-103955095	True	NA	-5	True	ATTAAA	-20	NA	103957190	103950744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630
transcript_35661.known	chr12	+	2782	18	FSM	ENSG00000166598.16	ENST00000299767.10	2782	18	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	668.623452923473	16223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTCTTGACTGTCTT	103735993	True	NA	12	True	AATAAA	-15	NA	103930409	103947926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35662.known	chr12	+	3248	17	FSM	ENSG00000166598.16	ENST00000680281.1	3248	17	0	0	0	0	multi-exon	FALSE	canonical	3	3942	junction_7	688.245221105821	7345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735941	True	NA	8	True	AATAAA	-11	NA	103930357	103947922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35663.known	chr12	+	2816	19	FSM	ENSG00000166598.16	ENST00000680370.1	2816	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1704.0851750868	3976	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735993	True	NA	8	True	AATAAA	-11	NA	103930409	103947922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103931710_103931749_103932276_103932419_103932825_103932943_103933955_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35664.known	chr12	-	1702	3	FSM	ENSG00000204954.10	ENST00000378090.9	1702	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	7.5	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTTTTTAACTTAAAA	-103955120	True	NA	NA	False	ATTAAA	-31	NA	103957215	103950193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103956630_103956749_103957068
transcript_35665.known	chr12	-	1243	4	FSM	ENSG00000204954.10	ENST00000547975.5	1243	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	17.326921891156	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTTTATTTCATTAA	-103955086	True	NA	0	True	ATTAAA	-25	NA	103957181	103950739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103956630_103956749_103957068
transcript_35666.known	chr12	+	2570	18	FSM	ENSG00000166598.16	ENST00000681698.1	2570	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1362.97453816845	4086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATACTCAGTGTCTTGACTG	103735996	True	NA	8	True	AATAAA	-11	NA	103930412	103947922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103930565_103931520_103931624_103932276_103932419_103932825_103932943_103934160_103934288_103937694_103937807_103938339_103938460_103939508_103939626_103941409_103941548_103941628_103941707_103941831_103941898_103942526_103942797_103943073_103943320_103943737_103943875_103946617_103946697_103946785_103946942_103947310_103947431_103947632
transcript_35667.known	chr12	-	1372	2	FSM	ENSG00000214198.8	ENST00000388789.4	1372	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTGTGTTCTTGTGA	NA	False	NA	NA	False	TTTAAA	-32	NA	103930131	103914961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103916084_103929881
transcript_35668.known	chr12	-	620	5	FSM	ENSG00000204954.10	ENST00000549960.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	42.7492689995981	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGATGTTTAGCCGA	-103955039	True	NA	64	True	NA	NA	NA	103957134	103951409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103951631_103953413_103953535_103954874_103954969_103956630_103956749_103957068
transcript_35676.known	chr12	+	1602	11	FSM	ENSG00000139372.15	ENST00000266775.13	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	117.640809245772	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTGGTGTAATTGTAATG	103957473	True	NA	NA	False	NA	NA	NA	103965844	103987192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_35679.known	chr12	+	3183	10	FSM	ENSG00000139372.15	ENST00000392872.8	3183	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_6	41.2579958580421	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACGGGCTTTTTCTATAG	103957500	True	NA	11	True	AATAAA	-26	NA	103965871	103988874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103976917_103977061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_35682.known	chr12	+	1387	9	FSM	ENSG00000139372.15	ENST00000544861.5	1387	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	123.142638330515	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTGTAATTGTAATGTA	103957473	True	NA	NA	False	NA	NA	NA	103965844	103987194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103979830_103980073_103980892_103980963_103982798_103982935_103983135_103983219_103983294_103983390_103984748_103984921_103985602_103985729_103986947
transcript_35685.nic	chr12	+	647	4	ISM	ENSG00000139372.15	ENST00000266775.13	1602	11	-98	7246	-75	-527	5prime_fragment	FALSE	canonical	3	63	junction_1	151.447093805798	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAAAAATTACAGACAC	NA	False	NA	NA	False	AAGAAA	-3	NA	103965746	103979946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_103966061_103972959_103973034_103976917_103977061_103979830
transcript_35686.known	chr12	+	1139	3	FSM	ENSG00000139372.15	ENST00000544060.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_1	53.5	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTTTTAAAATAACAGCAAA	103957531	True	NA	NA	False	CATAAA	-14	NA	103965902	103980668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103976917_103977061_103979830
transcript_35688.nic	chr12	+	438	3	ISM	ENSG00000139372.15	ENST00000266775.13	1602	11	-5	10132	-2	-3413	5prime_fragment	FALSE	canonical	3	63	junction_1	22	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCACCATGAGAGCT	103957468	True	NA	NA	False	NA	NA	NA	103965839	103977060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_103966061_103972959_103973034_103976917
transcript_35689.nic	chr12	+	400	2	ISM	ENSG00000139372.15	ENST00000544060.1	1139	3	-99	3608	-18	-3413	5prime_fragment	FALSE	canonical	3	297	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTTTCACCATGAGAGCT	103957432	True	NA	NA	False	NA	NA	NA	103965803	103977060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_103966061_103976917
transcript_35690.known	chr12	+	862	2	FSM	ENSG00000139372.15	ENST00000545698.1	862	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGTAACTGTAAGAAACAT	103957470	True	NA	NA	False	NA	NA	NA	103965841	103980473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_103966061_103979830
transcript_35692.known	chr12	-	1927	11	FSM	ENSG00000120820.13	ENST00000360814.9	1927	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	11.1575086824972	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-104050176	False	NA	-16	True	AATAAA	-17	NA	104050187	103988986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_35694.nic	chr12	-	1773	10	ISM	ENSG00000120820.13	ENST00000548660.5	1835	11	14015	-293	19	0	3prime_fragment	FALSE	canonical	3	22	junction_9	19.5049851177704	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTATCATGTTACTA	-104050157	False	NA	-16	True	AATAAA	-17	NA	104050168	103988986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894
transcript_35695.known	chr12	-	1835	11	FSM	ENSG00000120820.13	ENST00000548660.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	27.6904315603784	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGTGCAAATTATACCT	-104064145	False	NA	-28	True	TATAAA	-12	NA	104064183	103989279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_103989578_103993391_103993505_103994334_103994502_103996734_103996848_103997450_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104049894_104050289_104063948
transcript_3570.nnic	chr1	+	1578	4	NNC	ENSG00000130772.14	novel	1829	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	33.0252428706689	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326157	True	NA	8	True	AATAAA	-14	NA	28329001	28335965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28329181_28330596_28330736_28334416_28335286_28335574
transcript_35703.nic	chr12	-	1187	7	ISM	ENSG00000120820.13	ENST00000360814.9	1927	11	42	8178	-8	2194	5prime_fragment	FALSE	canonical	3	60	junction_3	8.66826908263056	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTAGGAGTGAGCTAAGT	-104049472	True	NA	NA	False	AATAAA	-16	NA	104050145	103997164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_103997536_103999396_103999515_104003134_104003307_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_35706.nnic	chr12	-	851	5	NIC	ENSG00000120820.13	novel	862	6	NA	NA	-56	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	28.5219213939033	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCCACTCTTCATGCT	NA	False	NA	NA	False	CATAAA	-18	NA	104050243	104012598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_104012826_104015012_104015106_104019629_104019677_104021356_104021492_104049894
transcript_35708.known	chr12	+	5660	15	FSM	ENSG00000111727.12	ENST00000229330.9	5660	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_12	3.41141541035987	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAGGTGTTATTTATTTT	104064269	True	NA	NA	False	AATAAA	-23	NA	104064530	104106524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104064724_104066166_104066316_104067946_104068108_104079444_104079654_104080745_104080831_104082499_104082607_104082712_104082902_104086846_104087015_104087985_104088039_104093385_104093564_104095359_104095564_104096359_104096434_104098342_104098481_104101967_104102154_104102958
transcript_35711.known	chr12	-	1727	8	FSM	ENSG00000120837.8	ENST00000551727.5	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	179.785132526444	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCCTTTTAATAAAATATAA	-104133386	False	34	-42	True	NA	NA	NA	104138017	104119354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104137375
transcript_35713.known	chr12	-	3424	8	FSM	ENSG00000120837.8	ENST00000240055.8	3424	8	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_7	68.0009003541835	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAAACATTGCTTTCT	-104133579	True	NA	-6	True	CATAAA	-15	NA	104138210	104117085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_104119770_104120399_104120480_104121239_104121322_104123225_104123424_104126113_104126245_104128423_104128518_104135447_104135533_104138140
transcript_35715.known	chr12	+	3930	15	FSM	ENSG00000198431.17	ENST00000503506.6	3930	15	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	75.2896786703577	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATATCCACGTGTGCCT	NA	False	NA	4	True	ATTAAA	-14	NA	104286681	104350277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287110_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_35716.known	chr12	+	3974	15	FSM	ENSG00000198431.17	ENST00000526691.5	3974	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	121.159786552928	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	NA	False	NA	10	True	ATTAAA	-20	NA	104286880	104350283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287347_104288930_104289041_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_35717.nic	chr12	+	3580	14	NIC	ENSG00000198431.17	novel	3974	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	93	junction_1	107.119741659763	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCACGTGTGCCTTCTTAC	NA	False	NA	10	True	ATTAAA	-20	NA	104286927	104350283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352
transcript_3572.known	chr1	+	1829	3	FSM	ENSG00000130772.14	ENST00000373842.9	1829	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	7	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTGTGTAATTCTGAT	28326195	True	NA	8	True	AATAAA	-14	NA	28329039	28335965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28329181_28330596_28330736_28334416
transcript_35722.known	chr12	+	400	5	FSM	ENSG00000198431.17	ENST00000526580.5	400	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	160.334805953043	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACAGAATCACATTGGCT	104282514	True	NA	NA	False	NA	NA	NA	104287056	104318943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104287110_104311289_104311413_104313244_104313318_104315776_104315897_104318912
transcript_35724.known	chr12	+	4082	15	NNC	ENSG00000198431.17	novel	3974	15	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_14	165.92992435338	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATGGTCTTGGGAGTCT	NA	False	NA	32	True	ATTAAA	-42	NA	104286681	104350305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_104287347_104311289_104311413_104313244_104313318_104315776_104315897_104318912_104319056_104319469_104319586_104321090_104321317_104325336_104325430_104326346_104326424_104327514_104327672_104331533_104331642_104334236_104334333_104339138_104339274_104348352_104348413_104348415
transcript_35726.nnic	chr12	-	1201	3	Antisense	novelGene_ENSG00000213442.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	non_canonical	0	0	junction_1	0	85545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	104273823	104265268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_104265918_104272946_104273301_104273625
transcript_35730.nnic	chr12	+	1183	3	Genic_Genomic	ENSG00000213442.5	novel	528	1	NA	NA	-36	7987	multi-exon	FALSE	non_canonical	0	0	junction_1	0	84906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATCAAGAGGTCAGGA	104265176	False	NA	NA	False	AAAACA	-5	NA	104265272	104273823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_+_104265890_104272932_104273301_104273625
transcript_35732.nnic	chr12	+	523	2	Genic_Genomic	ENSG00000213442.5	novel	528	1	NA	NA	-40	72	multi-exon	FALSE	canonical	3	63	junction_1	0	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGATCTGGCTGGACA	104265172	False	NA	NA	False	AATAAA	-35	NA	104265268	104265908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_+_104265342_104265458
transcript_35735.nnic	chr12	+	594	2	Genic_Genomic	ENSG00000213442.5	novel	528	1	NA	NA	-36	76	multi-exon	FALSE	canonical	0	0	junction_1	0	1479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGCTGGACAAACT	104265176	False	NA	NA	False	AATAAA	-39	NA	104265272	104265912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_+_104265587_104265632
transcript_35737.known	chr12	+	528	1	FSM	ENSG00000213442.5	ENST00000462885.1	528	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43829	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGTGCAGGGCCCTCGTCC	104265212	False	NA	NA	False	NA	NA	NA	104265308	104265836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104265300_104265800
transcript_35738.known	chr12	+	1467	1	FSM	ENSG00000255150.2	ENST00000527879.2	1467	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGGATATTTGATAATT	104303563	True	NA	11	True	AATAAA	-21	NA	104303738	104305205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104303700_104305200
transcript_35739.known	chr12	+	5791	33	FSM	ENSG00000136051.15	ENST00000332180.10	5791	33	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_28	24.4727008304662	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTCCCCTGGATGTTT	105101456	True	NA	15	True	AATAAA	-15	NA	105107730	105169130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105149614_105149750_105152342_105152452_105156725_105156793_105157235_105157323_105160000_105160149_105162748_105162846_105164110_105164308_105164640_105164741_105166863
transcript_35741.known	chr12	+	2897	25	FSM	ENSG00000136051.15	ENST00000311317.8	2897	25	0	0	0	0	multi-exon	TRUE	canonical	2	9	junction_24	49.7234015999174	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAACAAACAA	105101439	True	NA	NA	False	NA	NA	NA	105107713	105147905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105107862_105111124_105111265_105114215_105114270_105114361_105114428_105115183_105115230_105115660_105115729_105118445_105118529_105120554_105120598_105121100_105121205_105122117_105122239_105126003_105126128_105126234_105126363_105127128_105127290_105133769_105133897_105137885_105138012_105140293_105140402_105140898_105141046_105141166_105141247_105142452_105142559_105143126_105143244_105144286_105144456_105144717_105144873_105146451_105146527_105147041_105147147_105147609
transcript_35751.known	chr12	+	23524	4	FSM	ENSG00000151131.11	ENST00000552951.7	23524	4	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_3	55.659680200303	9520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTTTCCTTCTCTTTA	104974643	True	NA	5	True	AATAAA	-16	NA	104986315	105017625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104986468_104988166_104988254_104991711_104991849_104994477
transcript_35754.known	chr12	+	459	3	FSM	ENSG00000151131.11	ENST00000280749.5	459	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	594.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGTGACATATGTCTGCAA	104974666	True	NA	16	True	AATAAA	-16	NA	104986338	104994720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_104986468_104988166_104988254_104994477
transcript_35757.known	chr12	+	291	6	FSM	ENSG00000235162.9	ENST00000549934.2	291	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	229.527688961485	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCACAGACATTTCCAAGG	105330851	False	NA	NA	False	NA	NA	NA	105330867	105370680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105330938_105348601_105348627_105365806_105365843_105366616_105366697_105367476_105367510_105370633
transcript_35760.known	chr12	+	1329	5	FSM	ENSG00000235162.9	ENST00000612117.4	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	247.734232596143	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACATTTCTTAATTATT	105325852	True	NA	11	True	ATTAAA	-19	NA	105330635	105371517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_105330938_105348601_105348627_105366616_105366697_105367471_105367510_105370633
transcript_35764.known	chr12	+	1788	7	FSM	ENSG00000166046.11	ENST00000547153.5	1788	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.57347424467075	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCCCAGTAGAGAATTAC	106302286	True	NA	NA	False	AATAAA	-23	NA	106302802	106330171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106302942_106311040_106311233_106314357_106314494_106318343_106318465_106321485_106321707_106323509_106323647_106329329
transcript_35772.known	chr12	+	4183	28	FSM	ENSG00000013503.10	ENST00000228347.9	4183	28	0	0	0	0	multi-exon	TRUE	canonical	3	57	junction_15	9.92938027233284	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCGTGGCTGCTTTGTCAT	106356040	True	NA	8	True	NA	NA	NA	106357747	106510198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106357952_106363869_106363903_106366515_106366573_106366657_106366723_106369274_106369351_106369582_106369684_106376358_106376451_106378266_106378385_106380030_106380140_106393030_106393154_106405856_106405977_106410825_106410961_106427196_106427359_106430272_106430474_106432317_106432481_106433718_106433873_106437056_106437132_106437680_106437780_106444462_106444591_106454501_106454712_106457137_106457297_106459250_106459369_106463477_106463621_106496054_106496159_106496751_106496919_106501322_106501437_106504080_106504255_106509419
transcript_3578.known	chr1	+	6048	14	FSM	ENSG00000204138.13	ENST00000373839.8	6048	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	13.2173456053805	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATACTATTCTGGTGTGAG	28363505	True	NA	12	True	ATTAAA	-25	NA	28369739	28500364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28369826_28407409_28407464_28459084_28459259_28460211_28460293_28465684_28465850_28466381_28466769_28473553_28474152_28476106_28476292_28480450_28480605_28489169_28489226_28490950_28491013_28491649_28491788_28493014_28493092_28496533
transcript_35780.nnic	chr12	-	811	3	NIC	ENSG00000257711.2	novel	627	3	NA	NA	-90214	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_2	3	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATTGTCCTGATGACCCT	-106774864	True	NA	NA	False	AATAAA	-19	NA	106774921	106680757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_106681158_106681990_106682170_106774689
transcript_35782.known	chr12	+	5048	10	FSM	ENSG00000111785.21	ENST00000392837.9	5048	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	51.7987558838155	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTATATGATATTCCATT	106771665	True	NA	5	True	AATAAA	-18	NA	106774681	106889316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822_106870943_106885903
transcript_35783.known	chr12	+	2134	9	FSM	ENSG00000111785.21	ENST00000470628.2	2134	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	40.2692112537606	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTCCCCTTCCCCTCTTGCT	106771729	False	NA	NA	False	NA	NA	NA	106774745	106871505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106870822
transcript_35784.known	chr12	+	2440	9	FSM	ENSG00000111785.21	ENST00000392839.6	2440	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	29.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGAACACACACATCCTC	106771623	True	NA	NA	False	NA	NA	NA	106774639	106886786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_106774830_106783996_106784045_106814695_106815305_106825725_106825821_106842588_106842818_106843851_106843948_106851449_106851595_106860267_106860413_106885903
transcript_35791.nic	chr12	+	1370	3	ISM	ENSG00000111785.21	ENST00000470628.2	2134	9	-370	55942	-245	597	5prime_fragment	FALSE	canonical	3	169	junction_2	11	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCTCTCTTTTTAAGAG	106774137	True	NA	NA	False	AATATA	-16	NA	106774375	106815563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_106774830_106783996_106784045_106814695
transcript_35796.known	chr12	-	418	3	FSM	ENSG00000120832.10	ENST00000550496.1	418	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	25.5	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATACAACTGATAAACAG	-106986180	True	NA	NA	False	AATACA	-22	NA	106987122	106978614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106978768_106985114_106985226_106986968
transcript_35798.known	chr12	-	715	2	FSM	ENSG00000120832.10	ENST00000548101.1	715	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTGTTGAGAAGAATAAGC	-106986148	True	NA	NA	False	NA	NA	NA	106987090	106978178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106978772_106986968
transcript_35799.known	chr12	-	3235	2	FSM	ENSG00000120832.10	ENST00000552029.1	3235	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTGTTGCTTCTTTCTAG	-106986184	True	NA	-1	True	ATTAAA	-22	NA	106987126	106977548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106978772_106985114
transcript_358.known	SIRV5	+	2474	18	FSM	SIRV5A	SIRV510	2474	18	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_17	3356.7859535151	1554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAGTAACCTTGGTAACT	NA	False	NA	NA	False	AGTAAA	-11	NA	1028	11867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858_10992_11133
transcript_35801.known	chr12	-	2987	13	FSM	ENSG00000008405.12	ENST00000008527.10	2987	13	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_11	22.0031563392366	258	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTACGTGTTTTTTT	-107089862	True	NA	0	True	ATTAAA	-19	NA	107093549	106991363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_106992002_106992786_106992891_106992964_106993037_106997293_106997387_106997487_106997691_106997914_106998067_106999550_106999863_106999941_107000083_107001279_107001369_107001763_107001949_107005105_107005249_107022083_107022193_107092803
transcript_35807.known	chr12	+	811	7	FSM	ENSG00000151136.15	ENST00000494235.2	811	7	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	18.3938395484285	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCCTAGTGCAGGGAATG	107634773	False	NA	NA	False	NA	NA	NA	107634831	107657718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_107634959_107635284_107635391_107640310_107640414_107642089_107642172_107649205_107649275_107651673_107651788_107657508
transcript_35812.known	chr12	+	2549	15	FSM	ENSG00000136045.12	ENST00000412830.8	2549	15	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_11	59.6970668954377	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTATTCTGTTTCTTTGTT	107677430	True	NA	9	True	ATTAAA	-15	NA	107685798	107713162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692999_107693097_107696473_107696585_107697466_107697598_107699372_107699435_107702934_107703032_107703684_107703747_107704635_107704748_107708925_107709017_107709110_107709233_107710404_107710511_107712110
transcript_35813.known	chr12	+	851	7	FSM	ENSG00000136045.12	ENST00000552760.5	851	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	299.07547356627	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAGAAAGGAAAGAAGG	107677433	True	NA	NA	False	AGTAAA	-15	NA	107685801	107697578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_107685972_107688447_107688507_107688614_107688803_107692813_107692900_107692971_107693097_107696473_107696585_107697466
transcript_35814.known	chr12	-	4182	12	FSM	ENSG00000110851.12	ENST00000228437.10	4182	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_7	11.5365033303384	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGATTCCTCTGGTAGTCT	-107760531	True	NA	NA	False	ATTAAA	-20	NA	107761137	107732870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_107734523_107739382_107739552_107740945_107741261_107742220_107742349_107743196_107743283_107744542_107744662_107746274_107746425_107751414_107752210_107753923_107754110_107756831_107756966_107760504_107760772_107760956
transcript_35815.nnic	chr12	-	753	3	NNC	ENSG00000257398.8	novel	601	5	NA	NA	12439	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGGTGTGGGTTTGTA	-107822579	False	NA	NA	False	AATAAA	-45	NA	107822591	107809482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_107809711_107810577_107810634_107822122
transcript_35820.nnic	chr12	-	1952	2	Genic_Genomic	ENSG00000258072.1	novel	679	1	NA	NA	209	21495	multi-exon	FALSE	canonical	2	25	junction_1	0	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTCAGGGCTGAGAA	-107903464	True	NA	NA	False	AATAAA	-15	NA	107903739	107881774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_-_107882994_107903006
transcript_35825.known	chr12	-	4154	19	FSM	ENSG00000075856.12	ENST00000546815.6	4154	19	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_10	30.3415231109343	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGCTTCCAGCATTCCTC	-108560544	True	NA	-3	True	AATAAA	-18	NA	108561173	108522213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35826.known	chr12	-	3704	19	FSM	ENSG00000075856.12	ENST00000228284.8	3704	19	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_15	70.6739383051175	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACGTTCTCTTCAAAAC	-108560530	True	NA	-35	True	NA	NA	NA	108561159	108522703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544533_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35828.nic	chr12	-	1891	15	ISM	ENSG00000075856.12	ENST00000546815.6	4154	19	-25	7996	-25	0	5prime_fragment	FALSE	canonical	3	279	junction_6	25.2393642987315	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAGAGGCCCAGAGAAGC	-108561040	False	NA	NA	False	AAAAAG	-9	NA	108561198	108530209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_3583.nnic	chr1	+	478	3	NNC	ENSG00000204138.13	novel	6048	14	NA	NA	9	155	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	37.5	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGCCTTAGCCAGATTC	28363484	True	NA	NA	False	AATAAA	-35	NA	28369718	28497700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_28369826_28407409_28407464_28497383
transcript_35834.known	chr12	+	3255	3	FSM	ENSG00000198855.7	ENST00000552695.6	3255	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGACTGTCTTATTT	108514723	True	NA	NA	False	AATAAA	-19	NA	108515276	108521210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108515362_108516914_108517274_108518399
transcript_35836.nic	chr12	+	693	3	NIC	ENSG00000198855.7	novel	3255	3	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	2	junction_2	23	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTCTCATGAGGAGTCA	108514718	True	NA	NA	False	AATAAA	-13	NA	108515271	108525832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_108515362_108516914_108517274_108525588
transcript_35837.known	chr12	-	3726	18	FSM	ENSG00000075856.12	ENST00000651280.1	3726	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_14	80.6856431490796	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAGTCAAATCCCATT	-108560544	True	NA	-49	True	AATAGA	-16	NA	108561173	108522589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538933_108539090_108543027_108543153_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35838.known	chr12	-	3637	19	FSM	ENSG00000075856.12	ENST00000546728.5	3637	19	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	80.1782735880211	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAACTGACGTTCTCTTCA	-108560532	True	NA	-39	True	NA	NA	NA	108561161	108522707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108523635_108524315_108524507_108525456_108525610_108526098_108526554_108530141_108530311_108531203_108531281_108532221_108532335_108535358_108535469_108536513_108536573_108536707_108536786_108537487_108537596_108538064_108538204_108538944_108539090_108543027_108543153_108544426_108544479_108545138_108545324_108547886_108547992_108549087_108549215_108560842
transcript_35840.known	chr12	+	1169	7	FSM	ENSG00000136003.16	ENST00000539580.5	1169	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	637.830546113586	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552078	True	NA	14	True	AATAAA	-15	NA	108562605	108569368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108567657_108567758_108568830
transcript_35843.known	chr12	+	1069	6	FSM	ENSG00000136003.16	ENST00000392807.8	1069	6	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	630.740200082411	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552078	True	NA	14	True	AATAAA	-15	NA	108562605	108569368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564059_108564156_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_35849.known	chr12	+	983	5	FSM	ENSG00000136003.16	ENST00000311893.14	983	5	0	0	0	0	multi-exon	FALSE	canonical	3	1381	junction_1	75.5360013503495	2493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTCTCTAGTAAGCCT	108552068	True	NA	14	True	AATAAA	-15	NA	108562595	108569368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108568830
transcript_35850.known	chr12	+	799	6	FSM	ENSG00000136003.16	ENST00000431221.6	799	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	700.43003933298	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTGTGGTTTCTTTCAG	108552073	True	NA	4	True	AATACA	-17	NA	108562600	108569092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567919_108568017_108568830
transcript_35851.known	chr12	+	795	6	FSM	ENSG00000136003.16	ENST00000547005.5	795	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	696.051722216101	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTTCTTTCAGCCCACTT	108552073	True	NA	11	True	AATACA	-24	NA	108562600	108569099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_108562737_108564278_108564393_108565320_108565432_108567189_108567269_108567657_108567744_108568830
transcript_35853.known	chr12	-	3814	11	FSM	ENSG00000110880.11	ENST00000261401.8	3814	11	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	55.1243140546892	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTTTGTGTTTATTTCA	-108726943	True	NA	NA	False	GATAAA	-18	NA	108731518	108645108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_108647523_108648604_108648851_108648962_108649021_108652271_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_35857.nic	chr12	-	1355	8	ISM	ENSG00000110880.11	ENST00000261401.8	3814	11	-32	6936	-24	0	5prime_fragment	FALSE	canonical	3	482	junction_7	54.9771752268009	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCACTTTTTTTTTTTT	-108726975	True	NA	NA	False	AAAAAG	-11	NA	108731550	108652044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_108652418_108654305_108654411_108657303_108657424_108658737_108658920_108662028_108662159_108678271_108678395_108701123_108701324_108731428
transcript_35859.known	chr12	+	3749	13	FSM	ENSG00000135093.13	ENST00000257548.10	3749	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_5	4.96375753727848	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGGTGTTCTTTTGTA	109051951	True	NA	NA	False	AATAAA	-24	NA	109052575	109088023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109052762_109056681_109056792_109057925_109058109_109067523_109067628_109071611_109071711_109072304_109072351_109073437_109073533_109081333_109081394_109081932_109082020_109082662_109082744_109082842_109083063_109084952_109085074_109085666
transcript_35864.known	chr12	-	1030	4	FSM	ENSG00000189046.11	ENST00000343075.7	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	29.2232783924049	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091823	True	NA	-3	True	AATAAA	-17	NA	109093472	109088188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092788_109093246
transcript_35865.nic	chr12	-	957	4	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_3	47.5184174820669	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109093474	False	NA	-3	True	AATAAA	-17	NA	109093502	109088188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109090008_109090208_109092506_109092788_109093349
transcript_35869.nic	chr12	-	1213	4	NIC	ENSG00000189046.11	novel	1180	4	NA	NA	23	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	48.4584587272668	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109093580	False	NA	-3	True	AATAAA	-17	NA	109093608	109088188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109090008_109090208_109092506_109092938_109093349
transcript_35872.nic	chr12	-	991	3	NIC	ENSG00000189046.11	novel	1030	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	2	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109093603	False	NA	-2	True	AATAAA	-18	NA	109093631	109088187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109088513_109092506_109092788_109093246
transcript_35875.known	chr12	-	895	3	FSM	ENSG00000189046.11	ENST00000619381.4	895	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	22.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTCTCTTTCCCTC	-109091839	True	NA	-2	True	AATAAA	-18	NA	109093488	109088187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109088513_109092506_109092938_109093349
transcript_35878.known	chr12	-	1180	4	FSM	ENSG00000189046.11	ENST00000429722.3	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	26.8865931067677	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTTTCTCTTTCCCT	-109091823	True	NA	-3	True	AATAAA	-17	NA	109093472	109088188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109088513_109090008_109090208_109092506_109092938_109093246
transcript_35880.known	chr12	+	2048	7	FSM	ENSG00000076248.11	ENST00000242576.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	96.6639367430619	1341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109089479	True	NA	23	True	AATAAA	-16	NA	109097596	109110992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109097812_109098431_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_35883.known	chr12	+	2130	6	FSM	ENSG00000076248.11	ENST00000336865.6	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	869	junction_5	46.189176221275	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTGTTAAAAGTTTGT	109090000	False	NA	6	True	NA	NA	NA	109098117	109110975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109098639_109099188_109099285_109101901_109102000_109102838_109102928_109103432_109103612_109109828
transcript_35886.known	chr12	+	2016	5	FSM	ENSG00000076248.11	ENST00000446767.2	2016	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	397.830051655226	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTGCAAGTGTCCTT	109095645	True	NA	23	True	AATAAA	-16	NA	109098150	109110992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109098639_109099188_109099285_109102838_109102928_109103432_109103612_109109828
transcript_35888.known	chr12	+	498	3	FSM	ENSG00000076248.11	ENST00000540158.1	498	3	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	149	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGACACTGGAGTTAAGCCA	109089561	False	NA	NA	False	TTTAAA	-4	NA	109097678	109099346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109097812_109098431_109098639_109099188
transcript_35891.known	chr12	+	678	5	FSM	ENSG00000076555.16	ENST00000544726.2	678	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	4.54835134966506	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACTTCCGGAGCTGCTG	109153525	True	NA	NA	False	NA	NA	NA	109154681	109172311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109154941_109166860_109166994_109167895_109168035_109171804_109171915_109172274
transcript_35898.known	chr12	-	3920	7	FSM	ENSG00000110906.13	ENST00000228495.11	3920	7	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	31.196954979613	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTCTGGCTCTTTTC	-109471716	True	NA	NA	False	AATAAA	-15	NA	109477300	109448654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109460635_109460806_109469514_109469729_109477259
transcript_35903.known	chr12	-	491	5	FSM	ENSG00000110906.13	ENST00000540355.5	491	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	93.8812414702746	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACGAGGACGAGGAGCGGGA	-109458844	False	NA	NA	False	NA	NA	NA	109458871	109451681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109451814_109456117_109456314_109457629_109457683_109457991_109458079_109458848
transcript_35906.known	chr12	-	708	2	FSM	ENSG00000110906.13	ENST00000538377.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCATGTGTGTATATGT	-109471716	True	NA	NA	False	NA	NA	NA	109477300	109469061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109469729_109477259
transcript_35907.known	chr12	+	1448	9	FSM	ENSG00000151148.14	ENST00000340074.9	1448	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	53.2762552644234	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475781	True	NA	11	True	ATTAAA	-17	NA	109477651	109490722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35910.known	chr12	+	1541	9	FSM	ENSG00000151148.14	ENST00000540230.5	1541	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	73.6206492772238	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGGCATGTTCTTGAA	109475782	True	NA	NA	False	AAGAAA	-11	NA	109477652	109491149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109477777_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35915.known	chr12	+	3600	8	FSM	ENSG00000151148.14	ENST00000537063.1	3600	8	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	46.0057671628775	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGTCA	109475784	True	NA	NA	False	NA	NA	NA	109477654	109492737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918
transcript_35917.nic	chr12	+	1145	8	NIC	ENSG00000151148.14	novel	1120	9	NA	NA	19	-83	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	74.0322599290612	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGATGTCTTTAAATTTTA	109477353	True	NA	5	True	ATTAAA	-16	NA	109477420	109490639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_109477765_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35918.nic	chr12	+	1024	8	NIC	ENSG00000151148.14	novel	1120	9	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	74.0322599290612	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGAGAAAGAGTGGTA	109475754	True	NA	11	True	ATTAAA	-17	NA	109477624	109490722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_109477765_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571_109488669_109489918_109490005_109490489
transcript_35919.nic	chr12	+	1530	7	ISM	ENSG00000151148.14	ENST00000340074.9	1448	9	-26	1679	-2	-1679	5prime_fragment	FALSE	canonical	3	82	junction_1	50.7137938719722	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTGGTAAGTGTC	109475755	True	NA	NA	False	TATAAA	-5	NA	109477625	109489043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_109478110_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571
transcript_35920.nic	chr12	+	1183	7	ISM	ENSG00000151148.14	ENST00000536398.5	1120	9	-7	1679	0	-1679	5prime_fragment	FALSE	canonical	3	87	junction_1	48.8685879567733	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCCCTGGTAAGTGTC	109475757	True	NA	NA	False	TATAAA	-5	NA	109477627	109489043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_109477765_109481636_109481743_109483530_109483713_109483860_109483982_109486011_109486072_109486470_109486576_109488571
transcript_35923.known	chr12	+	2833	11	FSM	ENSG00000110921.14	ENST00000228510.8	2833	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	23.1622537763491	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGACTAGGCGTGTTTA	109571717	True	NA	NA	False	CATAAA	-31	NA	109573793	109598125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35928.known	chr12	+	1770	10	FSM	ENSG00000110921.14	ENST00000392727.7	1770	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	44.2537576000998	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAGAGACTCCAGGCCAC	109571760	True	NA	8	True	AATAAA	-16	NA	109573836	109597261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109579801_109579947_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35930.known	chr12	-	1188	10	FSM	ENSG00000139428.12	ENST00000537496.5	1188	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	83.383984606691	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGCCGTGTGTGTGTG	-109570687	True	NA	-8	True	AATAAA	-11	NA	109573503	109556702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35936.known	chr12	+	1644	9	FSM	ENSG00000110921.14	ENST00000447878.6	1644	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	48.9029651452752	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGGAATAAAAAGATTTTGT	109571716	True	NA	-17	True	NA	NA	NA	109573792	109597236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35937.known	chr12	-	1089	9	FSM	ENSG00000139428.12	ENST00000544051.5	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	92.1946819236338	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGCAATGAGAAGGAGCT	-109570698	True	NA	-25	True	AATGAA	-32	NA	109573514	109556750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561242_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
transcript_35943.known	chr12	-	4090	9	FSM	ENSG00000139428.12	ENST00000545712.7	4090	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	22.0850628253578	1017	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCCTGGAAGGATTTG	-109570688	True	NA	NA	False	AATAAA	-40	NA	109573504	109553714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35944.known	chr12	-	1252	9	FSM	ENSG00000139428.12	ENST00000541763.6	1252	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	66.9846064405845	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTGCTGCAATGAGAAGGA	-109570664	True	NA	-28	True	AATGAA	-29	NA	109573480	109556753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561330_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35947.nic	chr12	-	1095	8	NIC	ENSG00000139428.12	novel	4090	9	NA	NA	27	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_7	67.1580529916752	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	-109570737	True	NA	-2	True	AATAAA	-17	NA	109573553	109556696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109573346
transcript_35957.known	chr12	-	945	7	FSM	ENSG00000139428.12	ENST00000540016.5	945	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	75.3313052824359	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGTGTGTGTGTGTGTGTG	-109570681	True	NA	-2	True	AATAAA	-17	NA	109573497	109556696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109557137_109559095_109559156_109561039_109561105_109561419_109561518_109561779_109561853_109565118_109565177_109573346
transcript_35962.nic	chr12	-	694	6	ISM	ENSG00000139428.12	ENST00000545712.7	4090	9	-58	7612	18	357	5prime_fragment	FALSE	canonical	3	197	junction_2	21.7108267921791	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACGCTGTCCTCCAGTTC	-109570746	True	NA	1	True	AATAAA	-19	NA	109573562	109561326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_109561518_109561779_109561853_109565118_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35963.known	chr12	+	702	5	FSM	ENSG00000110921.14	ENST00000545774.5	702	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	62.1168254179172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCCTGTATTTGCTTA	109571755	True	NA	NA	False	NA	NA	NA	109573831	109587069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109573874_109574808_109574901_109575997_109576146_109586021_109586126_109586753
transcript_35966.known	chr12	-	650	4	FSM	ENSG00000139428.12	ENST00000536760.1	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	23.4568161143456	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTTAGCTACTCAGGA	-109570667	True	NA	NA	False	NA	NA	NA	109573483	109564819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109565177_109568769_109568864_109571648_109571711_109573346
transcript_35969.known	chr12	-	1342	3	FSM	ENSG00000139428.12	ENST00000537236.2	1342	3	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAGTTAAAAAAT	-109570764	True	NA	NA	False	NA	NA	NA	109573580	109567817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109568864_109571648_109571711_109573346
transcript_35971.known	chr12	+	1725	9	FSM	ENSG00000110921.14	ENST00000636996.1	1725	9	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	49.1401058199919	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGAGACTCCAGGCCACCA	109572753	False	NA	10	True	AATAAA	-18	NA	109574829	109597263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109574901_109575997_109576146_109581394_109581551_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35972.known	chr12	+	1591	8	FSM	ENSG00000110921.14	ENST00000629016.2	1591	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	51.2942690835568	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGACTCCAGGCCACC	109572730	False	NA	9	True	AATAAA	-17	NA	109574806	109597262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109574901_109575997_109576146_109586021_109586126_109586753_109586800_109590770_109590862_109591240_109591358_109595027_109595182_109596425
transcript_35973.nic	chr12	-	1171	4	ISM	ENSG00000111199.12	ENST00000538125.5	2804	16	0	19057	0	-14010	5prime_fragment	FALSE	canonical	3	18	junction_3	5.31245915016974	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAAGAAGGCCAGG	-109832966	True	NA	NA	False	NA	NA	NA	109833401	109802614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_109803144_109808295_109808469_109814410_109814828_109833349
transcript_35974.known	chr12	-	973	6	FSM	ENSG00000139433.11	ENST00000537066.2	973	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	127.857107741416	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGCCCACTGCTGGACAC	-109876967	True	NA	NA	False	NA	NA	NA	109880378	109852554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109857854_109858194_109858682_109858742_109880271
transcript_35976.nnic	chr12	-	813	5	NNC	ENSG00000139433.11	novel	2407	5	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	110.250850336857	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-109877030	True	NA	-1	True	AATAAA	-22	NA	109880441	109850944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_109851244_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_35977.known	chr12	-	2407	5	FSM	ENSG00000139433.11	ENST00000318348.9	2407	5	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_4	11.5542200082913	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTGCACTGTATTGGT	-109877130	True	NA	-1	True	AATAAA	-22	NA	109880541	109850944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109852738_109855618_109855770_109857525_109857660_109858682_109858742_109880271
transcript_35979.known	chr12	-	5444	19	FSM	ENSG00000139436.22	ENST00000361006.9	5444	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	25.4155585672232	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTGGTAATGCTGTGC	-109994222	True	NA	-12	True	AATAAA	-16	NA	109996304	109929803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109933191_109934021_109934086_109938379_109938569_109939164_109939248_109947255_109947505_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_35980.known	chr12	-	2989	15	FSM	ENSG00000139436.22	ENST00000547815.5	2989	15	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	30.2415446101578	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAATGGGAGAAGCGAG	-109994214	True	NA	NA	False	NA	NA	NA	109996296	109947321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_109948847_109951166_109951317_109953091_109953235_109959846_109959959_109961277_109961376_109961612_109961686_109965525_109965578_109967457_109967504_109980951_109981047_109983372_109983504_109983607_109983695_109988962_109989069_109989689_109989803_109991626_109991761_109996172
transcript_35981.known	chr12	+	3096	13	FSM	ENSG00000139437.18	ENST00000405876.9	3096	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_11	11.6904519445001	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTCCTGGCTTTGTTAC	109899356	True	NA	17	True	AATAAA	-18	NA	109900273	109918069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571_109906641_109907525_109907700_109908585_109908699_109908870_109908938_109911062_109911236_109912990_109913073_109914441_109914628_109915402_109915547_109916590
transcript_35988.nic	chr12	+	971	5	ISM	ENSG00000139437.18	ENST00000405876.9	3096	13	-296	11432	-286	0	5prime_fragment	FALSE	canonical	3	48	junction_1	8.21583836257749	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	NA	False	NA	NA	False	AAGAAA	-6	NA	109899977	109906637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_109900427_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_35990.known	chr12	+	973	5	FSM	ENSG00000139437.18	ENST00000536408.2	973	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	27.206387117734	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGTGGTATGTGGCTCT	109900592	False	NA	NA	False	AAGAAA	-6	NA	109900608	109906637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_109901060_109903026_109903215_109903936_109904148_109904736_109904794_109906571
transcript_35996.known	chr12	-	496	3	FSM	ENSG00000174456.16	ENST00000551185.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAATGACCTTTGGTCTG	-110046288	True	NA	NA	False	NA	NA	NA	110048565	110042280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110042460_110044419_110044534_110048362
transcript_35997.known	chr12	-	1755	2	FSM	ENSG00000174456.16	ENST00000546651.3	1755	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGCTGAATTCAACA	-110046278	True	NA	6	True	GATAAA	-24	NA	110048555	110027027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110028590_110048362
transcript_36.known	ERCC-00077	+	258	1	FSM	ERCC-00077A	DQ516742	258	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAAA	-33	NA	0	258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00077_+_0_300
transcript_36001.known	chr12	-	461	2	FSM	ENSG00000174456.16	ENST00000546627.1	461	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGGAGAAGTTGGAACCAAA	-110046245	True	NA	NA	False	NA	NA	NA	110048522	110042311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110042613_110048362
transcript_36002.known	chr12	-	724	2	FSM	ENSG00000174456.16	ENST00000615315.2	1443	2	1	718	1	87	multi-exon	FALSE	canonical	3	79	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGGTTGCAAAGTGGTGT	-110046244	True	NA	NA	False	NA	NA	NA	110048521	110041894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110042460_110048362
transcript_36003.known	chr12	+	2710	19	FSM	ENSG00000122970.16	ENST00000552912.5	2710	19	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_1	18.0797274097227	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATCTATTTAAAAAATGTA	110122807	True	NA	2	True	AATAAA	-16	NA	110124334	110218775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110124444_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_36004.known	chr12	+	3124	19	FSM	ENSG00000122970.16	ENST00000242591.10	3124	19	0	0	0	0	multi-exon	FALSE	canonical	2	50	junction_1	19.1740726432439	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGTTGTCTTGTGTCAAA	110122829	True	NA	20	True	AATAAA	-34	NA	110124356	110218793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110180421_110180572_110190919_110191049_110192616_110192707_110203863_110203951_110205442_110205515_110205594_110205681_110209170_110209217_110218043
transcript_36009.known	chr12	+	3048	12	FSM	ENSG00000122970.16	ENST00000361948.8	3048	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_11	34.7624762073434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTAATGAGCCTCCCTG	110122807	True	NA	NA	False	AGTAAA	-16	NA	110124334	110169182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110124862_110127359_110127525_110128045_110128150_110128949_110129131_110132546_110132637_110134947_110135014_110135326_110135438_110136775_110136861_110143381_110143546_110146952_110147049_110162918_110163066_110167870
transcript_36014.known	chr12	+	4453	21	FSM	ENSG00000174437.18	ENST00000308664.10	4453	21	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_20	115.813762135594	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCAGTGTGGTGGTG	110281076	False	NA	NA	False	AATAAA	-14	NA	110281115	110351090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200_110346322_110350291
transcript_36015.known	chr12	+	8295	20	FSM	ENSG00000174437.18	ENST00000539276.7	8295	20	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_3	56.6081442414414	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCAGTGTGGTGGTGACT	110280834	False	NA	NA	False	AATAAA	-17	NA	110281246	110351093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110281908_110282603_110282622_110282712_110282796_110292019_110292125_110296598_110296738_110322991_110323073_110326389_110326476_110327552_110328018_110332596_110332686_110333180_110333284_110334011_110334144_110339280_110339404_110339502_110339722_110340658_110340995_110342227_110342449_110343231_110343435_110344885_110344972_110345248_110345383_110346000_110346119_110346200
transcript_36047.known	chr12	-	3023	11	FSM	ENSG00000196510.14	ENST00000455511.9	3023	11	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_10	34.9972856090297	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGAGTCTTTCAGTCTA	-110399157	True	NA	-6	True	AAAAAG	-3	NA	110403708	110372899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110374334_110376065_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_36048.known	chr12	-	2200	10	FSM	ENSG00000196510.14	ENST00000450008.3	2200	10	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_9	27.5886897562957	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATACAGAAGTGGTTTCTT	-110399179	True	NA	-24	True	AATAAA	-20	NA	110403730	110375476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110376217_110377392_110377618_110381751_110381949_110382842_110382961_110386326_110386470_110387738_110387893_110388511_110388624_110395100_110395221_110396265_110396453_110403526
transcript_36049.known	chr12	-	946	7	FSM	ENSG00000111229.16	ENST00000228825.12	946	7	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_3	108.877096867166	10578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTTAAAGTGTACAATTCA	-110423356	True	NA	57	True	GATAAA	-20	NA	110450337	110434822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110435218_110436109_110436205_110436556_110436684_110437083_110437153_110440311_110440389_110445451_110445552_110450254
transcript_36050.known	chr12	-	555	3	FSM	ENSG00000111229.16	ENST00000471641.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	988.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAATTATATATATTTT	-110423304	True	NA	NA	False	AATAAA	-24	NA	110450285	110442643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110443068_110445451_110445552_110450254
transcript_36052.known	chr12	-	1491	8	FSM	ENSG00000111231.9	ENST00000537466.6	1491	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	234.470658710036	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACTGCAGTGTCTAATT	-110461770	True	NA	-16	True	TATAAA	-42	NA	110468264	110452488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468125
transcript_36058.known	chr12	-	1604	8	FSM	ENSG00000111231.9	ENST00000543199.5	1604	8	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_7	232.098940900959	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTGCAGTGTCTAATTTG	-110468702	False	NA	-14	True	TATAAA	-44	NA	110468721	110452486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468471
transcript_3608.known	chr1	+	204	1	FSM	ENSG00000200087.1	ENST00000363217.1	204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGTATACTAGATTTTAAG	28508548	False	NA	5	True	NA	NA	NA	28508558	28508762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28508600_28508800
transcript_36085.known	chr12	-	564	5	FSM	ENSG00000111231.9	ENST00000550974.1	564	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_4	263.629000680881	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGCAAAAAAGGAAATTGA	-110461770	True	NA	NA	False	AGTAAA	-1	NA	110468264	110455837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468195
transcript_36087.known	chr12	+	375	1	FSM	ENSG00000241680.1	ENST00000490759.1	375	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	302	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGATCGTCAAATACATC	110460968	False	NA	NA	False	NA	NA	NA	110460987	110461362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110461000_110461400
transcript_36088.known	chr12	-	1457	8	FSM	ENSG00000111231.9	ENST00000228827.8	1457	8	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_4	59.0772583062179	2022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGCAGTGTCTAATTTGA	-110461763	True	NA	-13	True	TATAAA	-45	NA	110468257	110452485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110453097_110453742_110453872_110455585_110455683_110455814_110455931_110457509_110457635_110459694_110459863_110465105_110465215_110468155
transcript_36089.known	chr12	+	1101	7	FSM	ENSG00000204856.12	ENST00000377673.10	1101	7	0	0	0	0	multi-exon	FALSE	canonical	2	160	junction_4	39.0071218568553	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	110466502	True	NA	17	True	ATTAAA	-18	NA	110468844	110490385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110469019_110473077_110473119_110485077_110485200_110486324_110486455_110486533_110486718_110487860_110487944_110490018
transcript_3609.known	chr1	+	2201	3	FSM	ENSG00000242125.3	ENST00000413987.1	2201	3	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	131	4015	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGGTTTTAGTATGTTT	28462191	True	NA	25	True	AGTAAA	-17	NA	28505979	28510892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28506085_28508127_28508161_28508829
transcript_36090.known	chr12	+	792	4	FSM	ENSG00000204856.12	ENST00000546396.1	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	121.628761218536	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAATTACTTTTCTTTA	110486289	False	NA	17	True	ATTAAA	-18	NA	110486300	110490385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110486459_110486533_110486718_110487860_110487944_110490018
transcript_36095.known	chr12	-	1059	6	FSM	ENSG00000111237.19	ENST00000546588.1	1059	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	754.780656879865	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGAATCTAGACTTTCTT	-110485694	True	NA	-76	True	NA	NA	NA	110502092	110491690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416_110501560_110502048
transcript_3610.known	chr1	+	1577	11	FSM	ENSG00000180198.17	ENST00000373831.7	1577	11	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_3	215.879804520942	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCCTCCTCTTTGGAAT	28513260	True	NA	24	True	NA	NA	NA	28518256	28538164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28518309_28529857_28529940_28530522_28530616_28531802_28531991_28532170_28532351_28535049_28535147_28535257_28535381_28535870_28536027_28536261_28536382_28536746_28536900_28537831
transcript_36102.known	chr12	-	996	5	FSM	ENSG00000111237.19	ENST00000447578.6	996	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	773.351916982172	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTTGATAACCTGTATT	-110485680	True	NA	-10	True	AATAAA	-17	NA	110502078	110491624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110498819_110498860_110502048
transcript_36103.known	chr12	-	818	5	FSM	ENSG00000111237.19	ENST00000549970.5	818	5	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	763.751595743014	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATCTTCTCTGTTAATA	-110485713	True	NA	33	True	AGTAAA	-7	NA	110502111	110491885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499456_110499547_110502048
transcript_36104.known	chr12	-	1091	5	FSM	ENSG00000111237.19	ENST00000360579.11	1091	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	754.103606940054	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTCTCTTACATTGTGT	-110485701	True	NA	-23	True	ATTAAA	-23	NA	110502099	110491522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110502048
transcript_36116.known	chr12	-	1124	5	FSM	ENSG00000111237.19	ENST00000621131.4	1124	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	766.764957467411	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCTTCTCTTACATTG	-110485105	False	NA	-26	True	ATTAAA	-20	NA	110501503	110491525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110492123_110492995_110493232_110496011_110496204_110499534_110499547_110501416
transcript_36145.known	chr12	-	810	2	FSM	ENSG00000111237.19	ENST00000550267.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTGGAAACTTCATAGTG	-110485709	True	NA	NA	False	AATGAA	-42	NA	110502107	110498795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110499547_110502048
transcript_36147.known	chr12	+	1879	15	FSM	ENSG00000204852.17	ENST00000397655.7	1879	15	0	0	0	0	multi-exon	TRUE	non_canonical	1	2	junction_5	15.773427668334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613252	True	NA	10	True	ATTAAA	-18	NA	110614112	110649128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634395_110634464_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647210_110647337_110647748_110647894_110649042
transcript_36150.known	chr12	+	2222	15	FSM	ENSG00000204852.17	ENST00000397659.9	2222	15	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_12	13.4475549708442	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGCTGTCGCAATAGTT	110613268	True	NA	NA	False	NA	NA	NA	110614128	110649430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110641541_110641628_110642248_110642390_110644966_110645130_110647195_110647337_110647748_110647894_110649042
transcript_36167.known	chr12	-	1685	8	FSM	ENSG00000122986.14	ENST00000242607.13	1685	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_7	13.5586405916625	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCCAAGACTCCACTATA	-110688278	True	NA	92	True	NA	NA	NA	110689115	110648685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689079
transcript_36168.nic	chr12	-	1742	8	NIC	ENSG00000122986.14	novel	1685	8	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	26.2919247321768	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTCTTTTCCCTGGACC	-110689919	True	NA	-19	True	AATAAA	-22	NA	110689929	110648796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_110649476_110650167_110650281_110651216_110651449_110655233_110655339_110661163_110661449_110683224_110683265_110688624_110688709_110689725
transcript_36175.known	chr12	+	2149	4	FSM	ENSG00000204852.17	ENST00000550703.6	2149	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5.31245915016974	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTTGTATTTTGTCTCTT	NA	False	NA	NA	False	AATAGA	-27	NA	110614026	110630287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766
transcript_36176.known	chr12	+	1919	4	FSM	ENSG00000204852.17	ENST00000478122.6	1919	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.7257220756131	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATAGCATTAGGAGAAACAC	110613265	True	NA	NA	False	NA	NA	NA	110614125	110630095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614464_110619835_110619957_110626361_110626493_110628766
transcript_36177.known	chr12	+	1531	12	FSM	ENSG00000204852.17	ENST00000549123.6	1531	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.9926870721715	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTCCAGCTTTGTTGCT	110613252	True	NA	10	True	ATTAAA	-18	NA	110614112	110649128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110614403_110619835_110619957_110626361_110626493_110628766_110628919_110632471_110632560_110634669_110634780_110636480_110636502_110640382_110640518_110641023_110641150_110647210_110647337_110647748_110647894_110649042
transcript_3618.known	chr1	-	524	6	FSM	ENSG00000197989.15	ENST00000475441.6	524	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	26.2404268257969	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTGTGTTTGTATTTTT	-28578172	False	NA	98	True	AATAAA	-27	NA	28581623	28578538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580559_28580647_28581093_28581230_28581589
transcript_36181.known	chr12	-	582	3	FSM	ENSG00000186298.12	ENST00000620030.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	1938	junction_1	18.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTTCTATATCTAAGG	-110702263	True	NA	NA	False	NA	NA	NA	110742867	110730524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_110730760_110731769_110731902_110742652
transcript_36188.nic	chr12	+	699	3	ISM	ENSG00000173093.13	ENST00000545036.5	1887	11	-205	48771	-14	-22509	5prime_fragment	FALSE	canonical	2	5	junction_1	4.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGATGAGAAGGTGTGGTC	110846544	True	NA	NA	False	ATTAAA	-25	NA	110846754	110858763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_110847106_110853404_110853575_110858585
transcript_36189.known	chr12	+	805	4	FSM	ENSG00000173093.13	ENST00000550317.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGCAGGCCAAAAGGGAG	110846558	True	NA	NA	False	AATGAA	-5	NA	110846768	110881272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110847106_110858585_110858776_110873841_110873962_110881114
transcript_36191.known	chr12	+	451	3	FSM	ENSG00000185847.9	ENST00000658431.1	451	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	123	945	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	NA	False	NA	20	True	AATAAA	-21	NA	110934589	110937451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110934687_110936611_110936699_110937184
transcript_36194.known	chr12	+	942	3	FSM	ENSG00000185847.9	ENST00000658709.1	942	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCATCTTGGTGTCTGCT	110927273	True	NA	NA	False	AATAAA	-16	NA	110936579	110942389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110941789
transcript_36195.known	chr12	+	1044	3	FSM	ENSG00000185847.9	ENST00000654512.1	1044	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.5	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATGAGTGTAAGGAAGAAAA	110927267	True	NA	NA	False	AATATA	-34	NA	110936573	110943763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110943067
transcript_36197.known	chr12	+	717	3	FSM	ENSG00000185847.9	ENST00000548368.6	717	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTTCTAAAATTTTCTGA	110927276	True	NA	NA	False	NA	NA	NA	110936582	110943701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110943323
transcript_36202.known	chr12	+	674	3	FSM	ENSG00000185847.9	ENST00000547607.2	1834	3	24	1136	5	-1132	multi-exon	FALSE	canonical	0	0	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCCGTGTTCTCTCTCT	110927300	True	NA	NA	False	NA	NA	NA	110936606	110956832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110956473
transcript_36204.known	chr12	+	1416	3	FSM	ENSG00000185847.9	ENST00000553177.6	1416	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCTTTGACAATATGTTAA	110927271	True	NA	NA	False	ACTAAA	-24	NA	110936577	110959093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289_110938513_110958021
transcript_36206.known	chr12	+	364	2	FSM	ENSG00000185847.9	ENST00000331096.2	364	2	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	0	6236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTGTTTAGATTTCAT	110927295	True	NA	20	True	AATAAA	-21	NA	110936601	110937451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110937184
transcript_36207.known	chr12	+	1319	2	FSM	ENSG00000185847.9	ENST00000666099.2	1323	2	4	0	-2	0	multi-exon	FALSE	canonical	2	14	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTATCATGTTACACGTT	110927280	True	NA	NA	False	AATAAA	-16	NA	110936586	110939496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110938289
transcript_36211.known	chr12	+	1607	2	FSM	ENSG00000185847.9	ENST00000657482.1	1607	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGGAAGAGACTCCTTT	110927276	True	NA	NA	False	AATAAA	-20	NA	110936582	110957964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_110936699_110956473
transcript_36212.nic	chr12	+	592	5	NIC	ENSG00000111249.14	novel	6703	22	NA	NA	-18	-165	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	8.1967981553775	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTAATGTCATTGTTGTG	111033685	True	NA	NA	False	AGTAAA	-15	NA	111034146	111270489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_111034241_111214199_111214311_111217889_111217938_111263760_111263840_111270229
transcript_36214.nnic	chr12	+	508	4	NNC	ENSG00000111249.14	novel	6703	22	NA	NA	-18	-51460	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	9.03081145609604	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGCTGATTTCCATATTT	111033685	True	NA	12	True	ATTAAA	-27	NA	111034146	111219194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_111034241_111214199_111214311_111217889_111217938_111218939
transcript_36215.known	chr12	+	6703	22	FSM	ENSG00000111249.14	ENST00000261726.11	6703	22	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.74425299788455	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGGTGTCTTGCTTCTT	111033703	True	NA	NA	False	AATACA	-15	NA	111034164	111350554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111034241_111214199_111214311_111217889_111217938_111263760_111263840_111291417_111291553_111293445_111293570_111295332_111295410_111296472_111296540_111298540_111298590_111304209_111304315_111306920_111307113_111307198_111307258_111308284_111308334_111308426_111308527_111310040_111310683_111312099_111312202_111320011_111320776_111322420_111322581_111334440_111334711_111338285_111338475_111341779_111342054_111347523
transcript_36216.nnic	chr12	+	426	4	NNC	ENSG00000257595.3	novel	335	3	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.02768199119819	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTCTTGGGGTCTCAGCG	NA	False	NA	10	True	AATAAA	-13	NA	111369209	111403307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_111369321_111371968_111372071_111396830_111396874_111403137
transcript_36218.known	chr12	+	335	3	FSM	ENSG00000257595.3	ENST00000552663.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGGGTCTCAGCGAGC	111369203	True	NA	13	True	AATAAA	-16	NA	111369260	111403310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111369321_111371968_111372071_111403137
transcript_3622.known	chr1	-	682	6	FSM	ENSG00000197989.15	ENST00000483436.5	682	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	34.1666504065002	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAGTATATTTGTGTTTG	-28578367	False	NA	91	True	AATAAA	-20	NA	28581818	28578545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579588_28579941_28579982_28580559_28580647_28581093_28581230_28581589
transcript_36224.known	chr12	+	2951	18	FSM	ENSG00000111271.15	ENST00000413681.7	2951	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_17	30.8623464607885	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTATGGCTATTGCTCACAG	111683183	True	NA	NA	False	AATAAA	-18	NA	111686067	111749132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749010
transcript_36226.known	chr12	+	1760	14	FSM	ENSG00000111275.13	ENST00000548536.1	1760	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	101.398796720333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAACCAAGAAAAATGAT	111765008	True	NA	NA	False	NA	NA	NA	111766947	111809630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111767097_111775604_111775721_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_36227.known	chr12	+	9561	13	FSM	ENSG00000111275.13	ENST00000261733.7	9561	13	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_5	48.0597862620669	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTGGTGATATTCTTTA	111764993	True	NA	NA	False	ATTAAA	-16	NA	111766932	111817532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111767097_111781917_111782023_111783157_111783299_111785266_111785347_111789822_111789935_111790433_111790563_111791305_111791420_111792060_111792164_111792597_111792783_111798077_111798243_111799905_111800064_111803858_111803974_111809542
transcript_36243.known	chr12	+	4006	21	FSM	ENSG00000111271.15	ENST00000313698.9	4006	21	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_13	20.1702751592535	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGGACTTTCTGTGTCA	111683168	True	NA	18	True	AGTAAA	-15	NA	111686052	111757099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_111686240_111692696_111692897_111702161_111702311_111705737_111705933_111709525_111709685_111712497_111712658_111715820_111715963_111721670_111721740_111727961_111728144_111729805_111729957_111733922_111734069_111736830_111737005_111744642_111745044_111746143_111746285_111747048_111747187_111747294_111747386_111748316_111748476_111749172_111749346_111753771_111753916_111755667_111755746_111756332
transcript_36250.known	chr12	-	662	3	FSM	ENSG00000234608.9	ENST00000442119.7	686	3	19	5	-7	0	multi-exon	FALSE	canonical	3	23	junction_2	17	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-111837678	True	NA	-5	True	AATAAA	-22	NA	111841964	111839767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840004_111840332_111840478_111841683
transcript_36256.known	chr12	-	930	2	FSM	ENSG00000234608.9	ENST00000443596.2	986	2	53	3	-5	1	multi-exon	FALSE	canonical	3	23	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTGAGTCTTTTGTTC	-111837616	True	NA	-4	True	AATAAA	-23	NA	111841902	111839766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840478_111841683
transcript_36257.nnic	chr12	-	893	2	FSM	ENSG00000234608.9	ENST00000692189.1	877	2	-26	10	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTTGAGTCTTTTGTT	-111837697	False	NA	-5	True	AATAAA	-22	NA	111841983	111839767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840004_111841326
transcript_36259.known	chr12	-	605	2	FSM	ENSG00000234608.9	ENST00000609228.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTTATGTGAGAATAAATA	-111837420	False	NA	-44	True	NA	NA	NA	111841706	111839806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111840032_111841326
transcript_36271.known	chr12	-	1534	11	FSM	ENSG00000198270.13	ENST00000552374.7	1534	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	9.86356933366416	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012335	True	NA	-5	True	AATAAA	-18	NA	112013165	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_36279.known	chr12	-	1446	10	FSM	ENSG00000198270.13	ENST00000550831.7	1446	10	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_4	6.9602043392737	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCTACTCCATGGTTGC	-112012295	True	NA	11	True	AATAAA	-34	NA	112013125	111931281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_36282.known	chr12	-	1403	10	FSM	ENSG00000198270.13	ENST00000355445.7	1403	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	12.3178080461472	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012309	True	NA	-5	True	AATAAA	-18	NA	112013139	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_36289.nic	chr12	-	1396	10	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	10.8775451115737	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012336	True	NA	-5	True	AATAAA	-18	NA	112013166	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_36295.nic	chr12	-	1366	9	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_6	11.4120276463037	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012336	True	NA	-5	True	AATAAA	-18	NA	112013166	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111936691_111936831_111937159_111937244_111938160_111938211_111991757_111991890_112005256_112005304_112013001
transcript_36299.known	chr12	-	1229	9	FSM	ENSG00000198270.13	ENST00000549537.6	1229	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	8.13076718397471	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTGTTACCTTGATGGATA	-112012305	True	NA	-77	True	NA	NA	NA	112013135	111931369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_36303.nic	chr12	-	1291	9	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	13.3738317246779	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012336	True	NA	-5	True	AATAAA	-18	NA	112013166	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111991757_111991890_112003799_112003864_112005256_112005304_112013001
transcript_36312.nic	chr12	-	1285	8	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_5	12.732731402947	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012394	True	NA	-5	True	AATAAA	-18	NA	112013224	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111937159_111937244_111938160_111938211_111991757_111991890_112005256_112005304_112013001
transcript_36314.nnic	chr12	-	1248	8	NIC	ENSG00000198270.13	novel	1534	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	10.8477402894684	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGTCATTTCAAAGCTG	-112012336	True	NA	-5	True	AATAAA	-18	NA	112013166	111931297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_111931828_111932585_111932660_111933885_111934031_111938160_111938211_111943264_111943370_111991757_111991890_112005256_112005304_112013001
transcript_36332.known	chr12	-	2761	1	FSM	ENSG00000198270.13	ENST00000437003.3	2761	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCATTGTCCACGTACC	-112012355	True	NA	-5	True	AATAAA	-21	NA	112013185	112010424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112010400_112013200
transcript_3634.known	chr1	-	1104	5	FSM	ENSG00000197989.15	ENST00000470977.6	1104	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	29.3204280323463	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	NA	False	NA	99	True	AATAAA	-28	NA	28581878	28578537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579982_28580559_28580647_28581093_28581230_28581589
transcript_36347.known	chr12	+	1333	2	FSM	ENSG00000089248.7	ENST00000455836.1	1333	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	3491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATGAATATATTGAACCAA	112013310	False	NA	-17	True	NA	NA	NA	112013347	112023220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112022149
transcript_36348.known	chr12	+	916	2	FSM	ENSG00000089248.7	ENST00000553161.1	916	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAAAAATTAGCTG	111997697	True	NA	NA	False	NA	NA	NA	112013428	112015325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112014590
transcript_36349.known	chr12	+	1623	3	FSM	ENSG00000089248.7	ENST00000261735.4	1623	3	0	0	0	0	multi-exon	FALSE	canonical	3	1928	junction_2	99	8199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACATCTTTTCTTCAGAC	111997694	True	NA	NA	False	AATAAA	-44	NA	112013425	112023449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112019755_112019895_112022149
transcript_36350.known	chr12	+	284	2	FSM	ENSG00000089248.7	ENST00000552052.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTGAAAACTCGGCTTC	111997748	False	NA	NA	False	NA	NA	NA	112013479	112019836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112013610_112019682
transcript_36352.nic	chr12	-	2641	22	ISM	ENSG00000111300.10	ENST00000261745.9	5771	24	-15	12573	-2	0	5prime_fragment	FALSE	canonical	3	136	junction_16	14.5994129040471	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAAGAAAC	-112105703	True	NA	NA	False	AAAAAG	-1	NA	112108798	112039261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_36359.nnic	chr12	-	824	7	NNC	ENSG00000111300.10	novel	421	5	NA	NA	-2	354	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	67.5213957859943	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGTCTTTTTATTATTG	-112105703	True	NA	NA	False	ATTAAA	-23	NA	112108798	112078327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_112078542_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_36361.known	chr12	-	5771	24	FSM	ENSG00000111300.10	ENST00000261745.9	5771	24	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_18	14.678018749291	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTGCCTGGTTCCTTTTT	-112105688	True	NA	0	True	TATAAA	-22	NA	112108783	112026688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112029654_112033232_112033380_112039228_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_36362.known	chr12	-	5815	23	FSM	ENSG00000111300.10	ENST00000552527.5	5815	23	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_17	14.9779452187277	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAACTTTGTGTGTGTCTG	-112105690	True	NA	-5	True	CATAAA	-19	NA	112108785	112027787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112029654_112033232_112033380_112039228_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112108715
transcript_36363.known	chr12	-	2815	23	FSM	ENSG00000111300.10	ENST00000551858.1	2815	23	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_22	51.0745080436496	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAAGAAAAAGAAGAAA	-112105684	True	NA	NA	False	ACTAAA	-6	NA	112108779	112039269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112039340_112040480_112040579_112042038_112042105_112043087_112043212_112043624_112043869_112047664_112047791_112048291_112048444_112053557_112053658_112054387_112054569_112060269_112060360_112061180_112061389_112068879_112068993_112071894_112072065_112074674_112074765_112075677_112075790_112078187_112078267_112078633_112078742_112081059_112081135_112087682_112087802_112090725_112090865_112093050_112093137_112097240_112097442_112108715
transcript_36365.known	chr12	+	2633	12	FSM	ENSG00000135148.12	ENST00000412615.7	2633	12	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	21.5326006920201	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTCTTGTGGTTCCTT	112121761	True	NA	15	True	AATAAA	-19	NA	112125559	112153604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112125619_112130510_112130570_112134737_112134874_112135012_112135067_112140818_112141225_112142088_112142296_112145585_112145663_112148073_112148305_112149750_112149872_112151800_112152141_112152426_112152500_112152734
transcript_36371.known	chr12	+	6073	16	FSM	ENSG00000179295.19	ENST00000351677.7	6073	16	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	53.4935094712953	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCGTTTGCTTCATCAG	112401272	True	NA	4	True	AATAAA	-23	NA	112418946	112509918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474_112486630_112488442_112488511_112489023_112489176_112502143_112502257_112504694_112504797_112505824
transcript_36391.known	chr12	+	1876	11	FSM	ENSG00000179295.19	ENST00000392597.5	1876	11	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	58.4160936728912	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTTTCTCCTTATT	112401234	True	NA	NA	False	ATTAAA	-15	NA	112418908	112486923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112419126_112446275_112446399_112450317_112450513_112453194_112453388_112454563_112454681_112455949_112456064_112472943_112473041_112477650_112477731_112477856_112478016_112482073_112482206_112486474
transcript_3640.known	chr1	-	1644	4	FSM	ENSG00000197989.15	ENST00000461448.6	1644	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	16.539514973407	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578406	True	NA	99	True	AATAAA	-28	NA	28581857	28578537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28580647_28581110_28581230_28581589
transcript_36404.known	chr12	-	921	7	FSM	ENSG00000089009.16	ENST00000202773.14	921	7	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_6	1778.01750553812	132690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCTCTTTTTTTAAT	-112279273	True	NA	-19	True	ATTAAA	-14	NA	112409605	112405188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409586
transcript_3643.known	chr1	+	1799	9	FSM	ENSG00000180098.9	ENST00000373830.4	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	28.5689954321114	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTCTTTTTATTCTTCTT	28549310	True	NA	14	True	AATATA	-7	NA	28553084	28578545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_36436.known	chr12	-	1082	4	FSM	ENSG00000089009.16	ENST00000551041.6	1082	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	4824.93608478104	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTGGTTTTCCTGAAGCA	-112279273	True	NA	NA	False	NA	NA	NA	112409605	112406342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112407070_112408239_112408339_112408419_112408657_112409586
transcript_36439.known	chr12	-	1074	7	FSM	ENSG00000089009.16	ENST00000424576.6	1074	7	0	0	0	0	multi-exon	FALSE	canonical	3	1588	junction_6	3626.88660867999	12116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCTGACTACATTTTGTG	-112279264	True	NA	-33	True	NA	NA	NA	112409596	112405202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112405377_112405852_112406038_112406293_112406343_112406746_112406891_112408239_112408339_112408419_112408657_112409410
transcript_3644.known	chr1	+	1132	10	FSM	ENSG00000180098.9	ENST00000480930.5	1132	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	84.5897872013249	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTGGAGATCATGAA	28549324	True	NA	19	True	NA	NA	NA	28553098	28577744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28560733_28561112_28561261_28561345_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_36440.known	chr12	-	899	2	FSM	ENSG00000089009.16	ENST00000553205.1	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	11277	junction_1	0	2329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTCTCTTTTTTTAA	-112406297	False	NA	-20	True	ATTAAA	-13	NA	112406344	112405189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112406038_112406293
transcript_36441.known	chr12	-	583	3	FSM	ENSG00000089009.16	ENST00000549562.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	6734	junction_2	2526	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGAGTGTGGTGGCTAA	-112279282	True	NA	NA	False	TTTAAA	-44	NA	112409614	112408020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112408339_112408419_112408657_112409586
transcript_36442.known	chr12	-	438	4	FSM	ENSG00000089009.16	ENST00000553213.2	438	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	5093.11934541757	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGCCTCGAAAGCTGT	-112279242	True	NA	NA	False	NA	NA	NA	112409574	112406870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_112406891_112408239_112408339_112408419_112408657_112409492
transcript_36443.known	chr12	+	1631	6	FSM	ENSG00000089127.15	ENST00000202917.10	1631	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGGTGTTTATTAAC	112906950	True	NA	NA	False	AATAAA	-17	NA	112906961	112919903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112907220_112908535_112908825_112911050_112911236_112916508_112916739_112917546_112917701_112919388
transcript_36444.known	chr12	+	1427	3	FSM	ENSG00000111331.14	ENST00000548514.2	1427	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGGTCTTTCCCTGTCCTG	NA	False	NA	NA	False	NA	NA	NA	112938424	112945336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_112938708_112941569_112941853_112944475
transcript_36446.nic	chr12	+	2147	6	ISM	ENSG00000135144.8	ENST00000547974.5	2175	8	3475	-31	-149	0	3prime_fragment	FALSE	canonical	2	16	junction_1	4.07921561087423	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGTCTTTTCCTGCCAA	113093264	True	NA	18	True	AATAAA	-18	NA	113093340	113098028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_113093701_113094037_113094100_113094788_113094948_113095041_113095204_113095324_113095415_113096714
transcript_3645.known	chr1	+	1610	8	FSM	ENSG00000180098.9	ENST00000491577.5	1610	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	24.7608974154074	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTACAACACTGCTGC	28549331	True	NA	39	True	NA	NA	NA	28553105	28577764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28553138_28553639_28553738_28560632_28561399_28564702_28564835_28567293_28567414_28571175_28571339_28571866_28571901_28577499
transcript_36452.nnic	chr12	+	789	2	Antisense	novelGene_ENSG00000111344.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAACGAGTGAATGAATGCT	NA	False	NA	NA	False	AATAAA	-16	NA	113103966	113105303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_113104418_113104965
transcript_36454.known	chr12	-	4380	20	FSM	ENSG00000123064.13	ENST00000314045.11	4380	20	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	65.8698035895868	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACTTGAGGGTGAACTTA	-113176711	True	NA	-2	True	AATAAA	-25	NA	113185479	113157173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113159113_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_36455.known	chr12	-	4377	20	FSM	ENSG00000123064.13	ENST00000306014.10	4377	20	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	59.5755531858171	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGAGGGTGAACTTAC	-113176710	True	NA	-1	True	AATAAA	-26	NA	113185478	113157172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113159110_113161269_113161383_113161892_113161998_113162931_113163046_113163131_113163275_113164066_113164286_113165643_113165718_113165801_113166033_113169769_113169905_113172352_113172564_113174639_113174772_113174874_113174937_113175035_113175158_113176839_113176936_113177051_113177094_113178976_113179027_113179142_113179332_113179934_113180006_113180928_113181059_113185277
transcript_3646.known	chr1	-	754	5	FSM	ENSG00000197989.15	ENST00000481220.6	754	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	40.7615014443776	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGTGTTTGTATTTTTT	-28578402	False	NA	99	True	AATAAA	-28	NA	28581853	28578537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28578681_28579532_28579588_28579911_28579982_28580424_28580647_28581589
transcript_36460.known	chr12	-	756	2	FSM	ENSG00000123064.13	ENST00000549271.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTGCACCGGTCAGAG	-113161469	False	NA	-50	True	NA	NA	NA	113161490	113158574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113159110_113161269
transcript_36463.known	chr12	+	1858	4	FSM	ENSG00000139405.16	ENST00000548278.2	1858	4	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	14.3527000944073	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATGTCACTTTTTTTCCC	113183222	True	NA	13	True	AATAGA	-18	NA	113185720	113192368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113186022_113186184_113186317_113186682_113187049_113191309
transcript_36466.nic	chr12	+	1245	3	ISM	ENSG00000139405.16	ENST00000548278.2	1858	4	-195	5069	0	-5	5prime_fragment	FALSE	canonical	3	222	junction_2	16.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGATGGTGAACTCC	113185401	True	NA	3	True	AATAAA	-13	NA	113185525	113187299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_113186022_113186184_113186317_113186682
transcript_36467.known	chr12	+	1898	3	FSM	ENSG00000139405.16	ENST00000552495.1	1898	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	104.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGCCATGAATGTCACTTT	113185417	False	NA	6	True	AATAGA	-11	NA	113185541	113192361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113186022_113186682_113187049_113191309
transcript_36469.known	chr12	-	1670	5	FSM	ENSG00000166578.10	ENST00000416617.3	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	-113220882	True	NA	-8	True	AATAAA	-23	NA	113221094	113195445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113195890_113197540_113197613_113200579_113200814_113207437_113208260_113220996
transcript_3647.known	chr1	-	1438	7	FSM	ENSG00000120656.14	ENST00000495422.2	1438	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	187.049904214535	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTTATATGCCTAAAAA	-28639328	True	NA	NA	False	NA	NA	NA	28643085	28602849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28623945_28624031_28642991
transcript_36474.nnic	chr12	-	852	4	NIC	ENSG00000166578.10	novel	1670	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.49691252107735	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAAGGGAACGCTCTACGA	-113220886	True	NA	-8	True	AATAAA	-23	NA	113221098	113195445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_113195890_113197540_113197613_113200579_113200814_113220996
transcript_36479.known	chr12	-	1369	3	FSM	ENSG00000166578.10	ENST00000299732.6	1369	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACGCTCTACGAATAAA	-113220882	True	NA	-3	True	AATAAA	-28	NA	113221094	113195440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113195890_113207437_113208260_113220996
transcript_36483.known	chr12	-	1872	3	FSM	ENSG00000166578.10	ENST00000546692.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGGTGGCTCATGCCTGT	-113220815	True	NA	NA	False	AATAAA	-17	NA	113221027	113200044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113200814_113207437_113208510_113220996
transcript_36485.known	chr12	+	1306	8	FSM	ENSG00000139410.15	ENST00000403593.9	1306	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	3.35638289270592	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGCGAATGCTATGGATC	113422315	True	NA	3	True	AATAAA	-16	NA	113422379	113438276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113422478_113427961_113428157_113428419_113428460_113429159_113429300_113434133_113434223_113435328_113435557_113436750_113436876_113437885
transcript_36488.nnic	chr12	+	976	3	FSM	ENSG00000257935.3	ENST00000688463.1	563	3	-458	45	-436	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCTTCTCCTTTCTTC	NA	False	NA	19	True	NA	NA	NA	113471544	113480485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113472083_113479895_113480031_113480182
transcript_3649.known	chr1	-	1359	6	FSM	ENSG00000120656.14	ENST00000263974.4	1359	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	154.175743876915	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAAGACAGGGTACCTTTG	-28639248	True	NA	-8	True	AATAAA	-13	NA	28643005	28603100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642654
transcript_36490.nnic	chr12	+	620	3	NIC	ENSG00000257935.3	novel	638	2	NA	NA	10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCTTCTCCTTTCTTC	113478539	True	NA	19	True	NA	NA	NA	113478624	113480485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_113478807_113479895_113480031_113480182
transcript_36491.known	chr12	+	522	2	FSM	ENSG00000257935.3	ENST00000551357.3	545	2	11	12	0	-3	multi-exon	FALSE	canonical	3	14	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTCACGAATCTGCCCT	113471918	True	NA	NA	False	AATAAA	-40	NA	113472002	113480624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113472083_113480182
transcript_36495.nnic	chr12	+	578	2	FSM	ENSG00000257935.3	ENST00000693028.1	638	2	-82	142	-82	0	multi-exon	FALSE	canonical	2	4	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGTGTCTTCTCCTTTCTTC	113478510	False	NA	19	True	NA	NA	NA	113478531	113480485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113478807_113480182
transcript_36496.nnic	chr12	+	697	2	FSM	ENSG00000257935.3	ENST00000693028.1	638	2	-82	23	-82	-3	multi-exon	FALSE	canonical	2	4	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGAGCTAACCTATAAC	113478510	False	NA	NA	False	AATAAA	-20	NA	113478531	113480604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_113478807_113480182
transcript_36497.known	chr12	-	3402	3	FSM	ENSG00000249550.8	ENST00000655514.1	3402	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACTTCCACAAGATTCAGA	NA	False	NA	NA	False	AATAAA	-9	NA	113773726	113743439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113746596_113767074_113767209_113773614
transcript_36498.known	chr12	-	626	3	FSM	ENSG00000249550.8	ENST00000661033.2	627	3	0	1	0	-1	multi-exon	FALSE	canonical	1	1	junction_1	5.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTACTGCCTCTTCCTAGC	NA	False	NA	NA	False	AATAAA	-14	NA	113773724	113735840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113736223_113767074_113767209_113773614
transcript_36499.known	chr12	-	435	3	FSM	ENSG00000249550.8	ENST00000657279.1	435	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTTTGTAGCAATTTAT	-113773614	True	NA	NA	False	AATAAA	-20	NA	113773686	113750497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113750727_113767074_113767209_113773614
transcript_3650.known	chr1	-	1335	6	FSM	ENSG00000120656.14	ENST00000373824.9	1335	6	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	24.071559982685	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGTTATATGCCTAAAAA	-28639310	True	NA	NA	False	NA	NA	NA	28643067	28602849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_28603575_28605371_28605461_28613246_28613362_28617952_28618031_28621913_28622166_28642991
transcript_36504.known	chr12	-	4148	24	FSM	ENSG00000122965.11	ENST00000261741.10	4148	24	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_14	29.5597821090833	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTTGTTTTCTTCTTC	-113957353	True	NA	-4	True	AGTAAA	-22	NA	113966325	113822056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_36505.known	chr12	-	4422	25	FSM	ENSG00000122965.11	ENST00000545145.6	4422	25	0	0	0	0	multi-exon	TRUE	canonical	3	95	junction_1	60.8791921896691	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGCTTGCATAATAATAAT	-113957334	True	NA	NA	False	AATAAA	-11	NA	113966306	113816741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_113818187_113823208_113823322_113844667_113844789_113858790_113858897_113914968_113915086_113918391_113918448_113920610_113920691_113924696_113924758_113927053_113927230_113937006_113937137_113939959_113940161_113942323_113942435_113945827_113945925_113946353_113946476_113947333_113947465_113948832_113949037_113950082_113950155_113952511_113952591_113955130_113955212_113957781_113958051_113959211_113959405_113959864_113959904_113960058_113960179_113962231_113962415_113966191
transcript_36507.known	chr12	+	3620	2	FSM	ENSG00000255399.5	ENST00000689769.1	4196	2	575	1	-220	-1	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGCTTTCTTCTTGAATGT	NA	False	NA	NA	False	ATTAAA	-18	NA	114408753	114412831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_114409008_114409465
transcript_36508.known	chr12	+	977	4	FSM	ENSG00000257817.2	ENST00000667467.1	977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAAGCATTCCTGGTTTGTG	114735250	False	NA	NA	False	ATTAAA	-13	NA	114735260	114767984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_114735310_114748095_114748211_114752899_114753012_114767283
transcript_36512.known	chr12	+	435	3	FSM	ENSG00000196668.4	ENST00000470091.1	435	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTTGCTTTGTGATC	116532817	True	NA	4	True	AATAAA	-19	NA	116533434	116536513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116533617_116536119_116536212_116536352
transcript_36513.known	chr12	+	1597	2	FSM	ENSG00000196668.4	ENST00000480237.1	1597	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	116532804	True	NA	NA	False	NA	NA	NA	116533421	116535521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116533463_116533965
transcript_36514.known	chr12	+	543	2	FSM	ENSG00000196668.4	ENST00000489452.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTGTCTGTCGGGAAT	116532850	True	NA	NA	False	NA	NA	NA	116533467	116534359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116533617_116533965
transcript_36517.known	chr12	+	314	2	FSM	ENSG00000196668.4	ENST00000477702.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTTGTGATCTCTGC	116535446	False	NA	9	True	AATAAA	-24	NA	116536063	116536518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116536212_116536352
transcript_36518.known	chr12	+	876	2	FSM	ENSG00000257883.1	ENST00000546835.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCACAGGCTAAAAATCCTA	116661559	True	NA	NA	False	NA	NA	NA	116661581	116698065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116662247_116697854
transcript_36524.nic	chr12	+	1562	8	NIC	ENSG00000135119.15	novel	2415	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_7	12.5112194547493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGGTATGAATTTGCT	116734416	True	NA	NA	False	AATAAA	-18	NA	116738290	116810520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_116738371_116740344_116740522_116741035_116741095_116749840_116750308_116753983_116754061_116766813_116766915_116779194_116779349_116810073
transcript_36530.known	chr12	+	415	2	FSM	ENSG00000135119.15	ENST00000615278.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCATCCCGCGTGCAAAA	NA	False	NA	NA	False	ATTAAA	-19	NA	116738177	116738694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116738371_116738472
transcript_36531.known	chr12	-	5789	2	FSM	ENSG00000135116.9	ENST00000257572.5	5789	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAAGACATTTGTGTTTT	-116881425	False	NA	-7	True	ATTAAA	-21	NA	116881441	116856143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_116861467_116880975
transcript_36532.known	chr12	+	4648	11	FSM	ENSG00000174989.13	ENST00000455858.2	4648	11	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	16.6324983090334	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGGTCAAGTTATTTT	116908911	True	NA	17	True	ATTAAA	-14	NA	116910964	117031148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_116911158_116928022_116928128_116945363_116945529_116949617_116949707_116964696_116964855_116985205_116985403_116988662_116988870_117010322_117010451_117024146_117024321_117027393_117027505_117028027
transcript_36535.nic	chr12	+	1524	4	ISM	ENSG00000174989.13	ENST00000309909.10	2452	11	91258	345	31884	-345	3prime_fragment	FALSE	canonical	3	97	junction_3	6.79869268479038	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTATTTTGCTTACTATT	117009787	True	NA	11	True	NA	NA	NA	117009950	117028766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_117010451_117024146_117024321_117027393_117027505_117028027
transcript_36539.known	chr12	-	1057	8	FSM	ENSG00000088992.18	ENST00000470612.5	1057	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_3	22.7335946680373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCCTCTGTCAGTTCCT	-117098102	True	NA	2	True	AATAAA	-26	NA	117099479	117038922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117039211_117041946_117041995_117046558_117046667_117046771_117046839_117049018_117049159_117056805_117056887_117075270_117075341_117099224
transcript_36542.known	chr12	-	422	3	FSM	ENSG00000088992.18	ENST00000549210.1	422	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	6.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCCAATAAAAAAAAAAAAAA	NA	False	NA	-32	True	NA	NA	NA	117046831	117038956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117039211_117046558_117046667_117046771
transcript_36544.known	chr12	-	5976	12	FSM	ENSG00000135108.16	ENST00000622495.5	5976	12	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_3	44.9763941758102	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGGCTCAAACACCATAG	-117179417	True	NA	-16	True	AATAAA	-17	NA	117190470	117141990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_36545.known	chr12	-	2906	12	FSM	ENSG00000135108.16	ENST00000330622.9	2906	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_3	97.6294224720776	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTGAAGGGAAAAAAAG	-117179403	True	NA	44	True	AATGAA	-20	NA	117190456	117145067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158085_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_36548.known	chr12	-	2554	11	FSM	ENSG00000135108.16	ENST00000550180.5	2554	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	144.100659262892	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTTCACACCTCTTGTT	-117179233	False	NA	63	True	AAAAAG	-19	NA	117190286	117145048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217
transcript_36552.nic	chr12	-	496	3	ISM	ENSG00000135108.16	ENST00000330622.9	2906	12	-26	41409	-12	0	5prime_fragment	FALSE	canonical	3	465	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCATAGCTTTAGCAG	-117179429	True	NA	NA	False	NA	NA	NA	117190482	117186476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_117186572_117189226_117189363_117190217
transcript_36553.known	chr12	-	4138	13	NNC	ENSG00000135108.16	novel	5976	12	NA	NA	-1	1268	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	138.117175494819	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCAAATGGCCTGCCCAAT	-117179418	True	NA	-6	True	AATAAA	-22	NA	117190471	117143780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_117146278_117155790_117155949_117157872_117158064_117165484_117165618_117166897_117167078_117172470_117172608_117174204_117174342_117174650_117174798_117177519_117177642_117186476_117186572_117189226_117189363_117190217_117190278_117190326
transcript_36554.known	chr12	-	519	4	FSM	ENSG00000135108.16	ENST00000551458.1	519	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	224.182960993917	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGCCATAGCTTTAGCAG	-117179417	True	NA	NA	False	NA	NA	NA	117190470	117186476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_117186572_117188758_117188794_117189226_117189363_117190217
transcript_36568.known	chr12	+	2449	12	FSM	ENSG00000111445.14	ENST00000392542.6	2449	12	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_2	140.052764555021	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011062	True	NA	NA	False	AATAAA	-24	NA	118016721	118032234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118016893_118017689_118018054_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_36570.known	chr12	-	2855	9	FSM	ENSG00000176871.9	ENST00000315436.8	2855	9	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	32.5921769754645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTAGTGTGGTGCTGGTGTG	-118058226	True	NA	NA	False	AATAAA	-21	NA	118061179	118032686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118034359_118034985_118035094_118035213_118035325_118036337_118036511_118038287_118038389_118042840_118042973_118043132_118043378_118052309_118052479_118061035
transcript_36575.known	chr12	-	1008	4	FSM	ENSG00000176871.9	ENST00000536602.5	1008	4	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_3	36.6696968444882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTTTCTCATCGGCACT	-118058159	True	NA	NA	False	NA	NA	NA	118061112	118042455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118042973_118043132_118043378_118052309_118052479_118061035
transcript_36577.known	chr12	-	687	1	FSM	ENSG00000176871.9	ENST00000614776.1	687	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTCCTTTTTCCTTT	-118036329	False	55	NA	False	NA	NA	NA	118036384	118035697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118035700_118036400
transcript_36578.known	chr12	+	2104	11	FSM	ENSG00000111445.14	ENST00000454402.7	2104	11	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_6	40.5344298097309	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATGTCAAATTCTTAAA	118011043	True	NA	NA	False	AATAAA	-24	NA	118016702	118032234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118016893_118019071_118019137_118019631_118019769_118020905_118020986_118022285_118022360_118024850_118025011_118025746_118025829_118026888_118027019_118027952_118028031_118029770_118029826_118031181
transcript_36580.known	chr12	-	5009	9	FSM	ENSG00000176834.14	ENST00000359236.10	5009	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	11.4864050076601	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTGATCTTGATT	-118099454	True	NA	-17	True	AATAAA	-16	NA	118104011	118063592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118066695_118068376_118068598_118071051_118071068_118071358_118071470_118073698_118073993_118079345_118079607_118082126_118082430_118095532_118095815_118103592
transcript_36596.nnic	chr12	-	1292	4	NNC	ENSG00000176834.14	novel	694	4	NA	NA	24	-28	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	5.18544972870135	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATAAAGTATTGCT	-118135556	False	NA	NA	False	AAAAAG	-8	NA	118136002	118117073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_118117883_118121028_118121176_118126480_118126671_118135856
transcript_36597.known	chr12	-	694	4	FSM	ENSG00000176834.14	ENST00000539956.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATGGAGTCTCGCACTGT	NA	False	NA	NA	False	NA	NA	NA	118136026	118117666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118117883_118121500_118121619_118126480_118126671_118135856
transcript_36598.nnic	chr12	-	1252	4	NIC	ENSG00000176834.14	novel	694	4	NA	NA	21	-28	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	2.86744175568088	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATAAAGTATTGCT	NA	False	NA	NA	False	AAAAAG	-8	NA	118136005	118117073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_118117883_118126480_118126671_118135638_118135743_118135856
transcript_3660.known	chr1	+	1950	2	FSM	ENSG00000188060.8	ENST00000373826.3	1950	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCATCTCAGAATCTGCC	NA	False	NA	9	True	AATAAA	-15	NA	28592199	28595443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28592400_28593693
transcript_36602.nnic	chr12	-	1145	3	NIC	ENSG00000176834.14	novel	694	4	NA	NA	24	-28	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATGGCATAAAGTATTGCT	-118135556	False	NA	NA	False	AAAAAG	-8	NA	118136002	118117073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_118117883_118126480_118126671_118135856
transcript_36603.nnic	chr12	+	1011	2	Genic_Genomic	ENSG00000274859.1	novel	328	1	NA	NA	-4953	3	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTGTGATTCTATTTC	118061037	True	NA	5	True	AATAAA	-16	NA	118061444	118066728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr12_+_118061681_118065953
transcript_36604.known	chr12	-	730	2	FSM	ENSG00000176834.14	ENST00000542195.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGAGTGTGACAAGCTGG	-118099433	True	NA	48	True	NA	NA	NA	118103990	118102838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118103171_118103592
transcript_36607.known	chr12	+	328	1	FSM	ENSG00000274859.1	ENST00000617135.1	328	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCAGAGTGTGATTCTAT	118066359	False	NA	2	True	AATAAA	-13	NA	118066397	118066725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118066400_118066700
transcript_36608.known	chr12	-	1865	2	FSM	ENSG00000176834.14	ENST00000612851.1	1865	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCTACTCTGTAAATAATA	-118099328	True	NA	-5	True	AATAAA	-18	NA	118103885	118101604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118103177_118103592
transcript_36619.known	chr12	+	1431	4	FSM	ENSG00000089220.5	ENST00000261313.3	1431	4	0	0	0	0	multi-exon	FALSE	canonical	3	5497	junction_2	227.453047657948	43519	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAACTGAGTCCCCGGATGT	118083316	True	NA	15	True	AATAAA	-19	NA	118136123	118145584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118136345_118138038_118138149_118139450_118139552_118144585
transcript_36620.known	chr12	-	4346	21	FSM	ENSG00000135090.14	ENST00000392533.8	4346	21	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	8.38137816829667	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCCTTGCTGTGTTATTGT	-118371993	True	NA	-3	True	AATAAA	-14	NA	118372907	118149800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806_118189942_118199050_118199258_118201295_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_36623.nic	chr12	-	1414	12	ISM	ENSG00000135090.14	ENST00000392533.8	4346	21	-30	51551	-30	70	5prime_fragment	FALSE	canonical	3	30	junction_5	4.09998992137443	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTTTCCAAGAGACACGG	-118372023	True	NA	NA	False	AATGAA	-6	NA	118372937	118201351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_118201464_118212913_118212996_118214016_118214111_118233673_118233766_118235557_118235672_118238072_118238170_118239226_118239273_118243414_118243517_118244893_118244966_118255447_118255656_118266654_118266760_118372647
transcript_36625.known	chr12	-	2147	8	FSM	ENSG00000135090.14	ENST00000537952.1	2147	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	12.6135657455109	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAACAGAAAAAAATTCAG	NA	False	NA	NA	False	ATTAAA	-34	NA	118190545	118150956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118151159_118152226_118152410_118160145_118160359_118161787_118162028_118172456_118172661_118177200_118177330_118181370_118181608_118189806
transcript_36627.nic	chr12	-	333	2	ISM	ENSG00000135090.14	ENST00000542692.1	588	4	-44	11121	-30	-11121	5prime_fragment	FALSE	canonical	3	40	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTTTGCTGCTAAAAT	-118372023	True	NA	NA	False	TATAAA	-9	NA	118372937	118266716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_118266760_118372647
transcript_36628.known	chr12	-	588	4	FSM	ENSG00000135090.14	ENST00000542692.1	588	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.3847763108502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGCAGAGCCTGCTCTAC	-118371979	True	NA	NA	False	AATAAA	-15	NA	118372893	118255595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118255656_118261496_118261674_118266654_118266760_118372647
transcript_36629.known	chr12	+	879	1	FSM	ENSG00000240342.3	ENST00000488803.1	879	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	613	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGTTTTTATACAAGAAA	118244889	False	NA	NA	False	NA	NA	NA	118246083	118246962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118246100_118247000
transcript_36630.known	chr12	+	4724	12	FSM	ENSG00000111707.12	ENST00000543473.2	4724	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	303.110350033648	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTTCATTTGGTGCATG	118360152	True	NA	10	True	AATAAA	-15	NA	118376554	118418033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118376834_118380161_118380232_118384011_118384068_118386113_118386186_118389926_118389947_118391125_118391283_118400658_118400755_118401758_118401821_118401982_118402005_118403411_118403518_118411072_118411158_118414334
transcript_36631.nnic	chr12	-	590	3	NNC	ENSG00000255618.2	novel	530	3	NA	NA	122	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	-118774368	True	NA	0	True	AATAAA	-22	NA	118774456	118773030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_118773303_118773610_118773776_118774303
transcript_36632.known	chr12	-	530	3	FSM	ENSG00000255618.2	ENST00000668907.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTGTGATGTGATTCT	-118774490	True	NA	0	True	AATAAA	-22	NA	118774578	118773030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_118773303_118773610_118773776_118774485
transcript_3664.known	chr1	+	1912	10	FSM	ENSG00000162419.13	ENST00000294409.2	1912	10	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	16.4451951780587	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAACAAAATC	28666470	True	NA	-10	True	NA	NA	NA	28668779	28714873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28668840_28683582_28683741_28690073_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_36641.known	chr12	+	8431	13	FSM	ENSG00000139767.10	ENST00000267260.5	8431	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.87082869338697	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGCTCAGTGTTCTCT	118981358	True	NA	2	True	ATTAAA	-24	NA	118981540	119163051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_118982014_119102235_119102383_119114277_119114365_119116936_119117009_119120249_119120277_119122069_119122121_119125380_119125480_119130677_119130835_119145380_119145686_119151016_119151221_119153538_119153650_119154242_119154384_119156494
transcript_36642.known	chr12	+	1861	3	FSM	ENSG00000152137.8	ENST00000281938.7	1861	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTGTGTGGTTCTTTTAA	119178876	True	NA	NA	False	AATAAA	-17	NA	119178930	119194746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119179680_119187024_119187089_119193698
transcript_36643.known	chr12	+	886	3	FSM	ENSG00000183273.7	ENST00000536742.5	886	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTGACTTTTCCATCC	119334648	True	NA	NA	False	ATTAAA	-23	NA	119334711	119433636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119335267_119428682_119428763_119433385
transcript_36644.known	chr12	-	495	3	FSM	ENSG00000248636.7	ENST00000535511.5	495	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTGGGATCTTCTTTTA	NA	False	NA	NA	False	AATAAA	-15	NA	119594240	119387990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_119388329_119553547_119553646_119594181
transcript_36646.nnic	chr12	+	1049	2	Antisense	novelGene_ENSG00000248636.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATATTGTCTGTGTTTCCT	NA	False	NA	NA	False	AATAAA	-25	NA	119363665	119365374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_119363843_119364502
transcript_36648.nnic	chr12	+	1125	2	Antisense	novelGene_ENSG00000248636.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATTAAATCCTATGCAGT	NA	False	NA	NA	False	AATAAA	-20	NA	119363665	119365450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_119363843_119364502
transcript_36650.nnic	chr12	+	1183	2	Antisense	novelGene_ENSG00000248636.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTGTGTGTGTGTTTT	NA	False	NA	NA	False	NA	NA	NA	119363665	119365508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_+_119363843_119364502
transcript_36652.known	chr12	+	2775	3	FSM	ENSG00000224982.4	ENST00000426426.3	2775	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACAGTGTGTGAATTGTGT	NA	False	NA	NA	False	AATAAA	-25	NA	119593773	119643075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119594035_119629735_119629873_119640698
transcript_36655.known	chr12	+	2303	8	FSM	ENSG00000111725.11	ENST00000541640.5	2303	8	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_1	74.0510028318872	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCCTGGAGGAGCTCT	119664588	True	NA	NA	False	AATAAA	-21	NA	119667863	119681624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119668046_119668235_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_36657.nic	chr12	+	2641	8	NIC	ENSG00000111725.11	novel	2219	7	NA	NA	21	0	intron_retention	FALSE	canonical	3	12	junction_1	103.02902305582	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119664609	True	NA	NA	False	AATAAA	-16	NA	119667884	119681619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_119668404_119671494_119671669_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_36658.known	chr12	+	2219	7	FSM	ENSG00000111725.11	ENST00000229328.10	2219	7	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_5	17.763883459299	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGACATGTGCCTGGAGGA	119668061	False	NA	NA	False	AATAAA	-16	NA	119668132	119681619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_119668404_119672300_119672465_119673963_119674058_119674339_119674455_119676536_119676671_119679932_119680002_119680247
transcript_3666.known	chr1	+	6358	10	FSM	ENSG00000162419.13	ENST00000373816.6	6358	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	9.87452139799728	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTCATATGAAGGTTC	28666474	True	NA	11	True	AATAAA	-22	NA	28668783	28719353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28668840_28683582_28683741_28690103_28690187_28691584_28691710_28692941_28693046_28696926_28697085_28702437_28702570_28704191_28704330_28710519_28710643_28714072
transcript_36665.nic	chr12	-	1080	7	ISM	ENSG00000122966.17	ENST00000612548.4	1799	13	-21	144758	11	-50362	5prime_fragment	FALSE	canonical	3	31	junction_2	6.31576510716547	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTCTCTCTTCATTT	-119874753	True	NA	NA	False	AATAAA	-13	NA	119877309	119832517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_119832865_119834085_119834229_119850173_119850276_119857522_119857699_119869059_119869202_119876072_119876182_119877248
transcript_36669.known	chr12	-	2855	6	FSM	ENSG00000111737.12	ENST00000229340.10	2855	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	13.0169120762184	371	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTCCAGGGTCTGTTT	-120110905	True	NA	-13	True	AATAAA	-17	NA	120116753	120095098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120097374_120098810_120098936_120099029_120099155_120103825_120103950_120108416_120108468_120116598
transcript_36675.known	chr12	-	8681	58	FSM	ENSG00000089154.11	ENST00000300648.7	8681	58	0	0	0	0	multi-exon	FALSE	canonical	2	187	junction_51	120.115590168549	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGTACCTGTTTTTGTA	-120194702	False	363403	16	True	ATTAAA	-32	NA	120194715	120127201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120127975_120129275_120129495_120130645_120130754_120131184_120131334_120131925_120132023_120134290_120134406_120134532_120134727_120136501_120136733_120137205_120137320_120137544_120137815_120137900_120138045_120138322_120138416_120138694_120138857_120140858_120141024_120142506_120142723_120142823_120142942_120144305_120144449_120144638_120144836_120144922_120145062_120145261_120145331_120147051_120147273_120148166_120148347_120149605_120149721_120149921_120150044_120151144_120151392_120153212_120153408_120153743_120153910_120154969_120155041_120155240_120155431_120155591_120155720_120156460_120156605_120156911_120156993_120157848_120158031_120158459_120158616_120159824_120160024_120160141_120160256_120161489_120161584_120161879_120162059_120162846_120162972_120163069_120163260_120164335_120164496_120164645_120164722_120168207_120168301_120170168_120170322_120173652_120173827_120174070_120174170_120175161_120175213_120175745_120175875_120176142_120176218_120177446_120177556_120177683_120177753_120178624_120178760_120178851_120178951_120183568_120183678_120184111_120184244_120184823_120184888_120190297_120190401_120194679
transcript_3675.known	chr1	+	2825	6	FSM	ENSG00000198492.16	ENST00000542507.5	2825	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	448.505696730822	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTCTAGTACCATTTAGTA	28735890	True	NA	21	True	AATAAA	-22	NA	28736620	28769774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28736810_28737046_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_36759.known	chr12	-	1257	8	FSM	ENSG00000089157.16	ENST00000228306.8	1257	8	0	0	0	0	multi-exon	FALSE	canonical	3	1072	junction_7	7723.53932297036	29096	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-120201182	False	29	-27	True	AATAAA	-14	NA	120201211	120196706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200892_120201082
transcript_36760.known	chr12	-	1344	7	FSM	ENSG00000089157.16	ENST00000551150.5	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_5	950.899574087611	50350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGACTCTTAATTTTGTA	-119837696	True	NA	-19	True	AATAAA	-22	NA	120201099	120196698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200729
transcript_36761.known	chr12	-	912	7	FSM	ENSG00000089157.16	ENST00000313104.9	912	7	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_2	8441.68654982851	8842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837704	True	NA	-22	True	AATAAA	-19	NA	120201107	120196701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_36762.known	chr12	-	993	8	FSM	ENSG00000089157.16	ENST00000546989.5	993	8	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	8306.22807148408	7247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-119837707	True	NA	-22	True	AATAAA	-19	NA	120201110	120196701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198632_120198853_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_36763.known	chr12	-	1106	8	FSM	ENSG00000089157.16	ENST00000549098.5	1106	8	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	8232.53952933363	2404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGTCTCTGGACTCTT	-119837707	True	NA	-28	True	AATAAA	-13	NA	120201110	120196707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199486_120200718_120200832_120201082
transcript_36764.known	chr12	-	2591	6	FSM	ENSG00000089157.16	ENST00000552461.5	2591	6	0	0	0	0	multi-exon	FALSE	canonical	3	21453	junction_5	1031.85685053693	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCTCTGGACTCTTA	-119837707	True	NA	-27	True	AATAAA	-14	NA	120201110	120196706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309
transcript_36765.known	chr12	-	720	2	FSM	ENSG00000089157.16	ENST00000552292.5	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	23570	junction_1	0	4241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGGACTCTTAATTTT	-120197795	False	NA	-22	True	AATAAA	-19	NA	120197808	120196701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321
transcript_36766.known	chr12	-	966	8	FSM	ENSG00000089157.16	ENST00000551258.5	966	8	0	0	0	0	multi-exon	FALSE	canonical	3	1411	junction_3	7901.82862587218	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGTCGGACGAGGATATG	-119837694	True	NA	-134	True	NA	NA	NA	120201097	120196813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120196935_120197321_120197463_120198553_120198771_120198894_120199001_120199117_120199206_120199309_120199486_120200729_120200832_120201082
transcript_36767.known	chr12	-	792	6	FSM	ENSG00000089157.16	ENST00000547475.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9252.45765405062	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGATCCCACCAGGA	-120200811	False	NA	NA	False	NA	NA	NA	120200824	120197321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120197463_120198553_120198740_120198894_120199001_120199117_120199206_120199309_120199486_120200729
transcript_36768.known	chr12	-	781	6	FSM	ENSG00000089157.16	ENST00000547211.5	781	6	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_5	9152.42973204384	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAAGGATCCCACCAGGA	-120200819	False	NA	NA	False	NA	NA	NA	120200832	120197321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120197463_120198553_120198740_120198853_120199001_120199117_120199206_120199309_120199426_120200729
transcript_36771.known	chr12	-	3683	11	FSM	ENSG00000089159.17	ENST00000424649.6	3683	11	0	0	0	0	multi-exon	FALSE	canonical	3	520	junction_5	101.323491846659	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTAGTGCTATTTCT	-120256502	True	NA	-6	True	AATAAA	-19	NA	120265771	120210446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215274_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_36772.known	chr12	-	3835	11	FSM	ENSG00000089159.17	ENST00000267257.11	3835	11	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_5	237.825650424844	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTATTTCTTGGTGGTC	-120256502	True	NA	2	True	AATAAA	-27	NA	120265771	120210438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120212581_120213841_120213991_120214135_120214218_120214824_120214999_120215102_120215418_120221622_120221759_120222548_120222751_120222862_120223000_120223717_120223834_120224150_120224378_120265616
transcript_36774.known	chr12	+	1170	5	FSM	ENSG00000255857.7	ENST00000535200.2	1199	5	29	0	-1	0	multi-exon	FALSE	canonical	3	17	junction_4	87.7624635023425	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCCAAGGGAGGCGGATC	120199265	True	NA	NA	False	NA	NA	NA	120201370	120213138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929_120211107_120212374
transcript_36777.known	chr12	+	707	4	FSM	ENSG00000255857.7	ENST00000542314.6	780	4	36	37	2	-37	multi-exon	FALSE	canonical	3	26	junction_3	82.174610839764	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAGAAAAAATAAAATCAAA	120199221	True	NA	-29	True	CATAAA	-42	NA	120201326	120210519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210085
transcript_36781.known	chr12	+	2525	4	FSM	ENSG00000255857.7	ENST00000667017.1	2525	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	79.3767388260986	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTACTGAAAATACAAAAAA	120199250	True	NA	NA	False	NA	NA	NA	120201355	120213210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120210929
transcript_36783.known	chr12	+	1166	4	FSM	ENSG00000255857.7	ENST00000542265.7	1183	4	17	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	29.1471363182656	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCAGGCATGGGGGCGTG	120199185	True	NA	NA	False	AATACA	-7	NA	120201290	120213231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838_120209935_120212374
transcript_36786.known	chr12	+	716	4	FSM	ENSG00000255857.7	ENST00000667721.2	748	4	26	6	-6	-4	multi-exon	FALSE	canonical	2	5	junction_2	86.3288287113098	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGATGGGGGTCTCACTA	120199260	True	NA	10	True	AATAAA	-10	NA	120201365	120212765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206713_120209838_120209935_120212374
transcript_36788.nic	chr12	+	930	3	FSM	ENSG00000255857.7	ENST00000693683.1	914	3	-16	0	1	0	multi-exon	FALSE	canonical	3	184	junction_2	14.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGACTCAGAGAATGGA	120199186	True	NA	8	True	AATAAA	-24	NA	120201291	120210556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120201427_120206544_120206622_120209838
transcript_36791.known	chr12	+	443	1	FSM	ENSG00000255857.7	ENST00000620336.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGGGTCTCACTATATT	NA	False	NA	14	True	AATAAA	-14	NA	120212326	120212769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120212300_120212800
transcript_36792.known	chr12	-	141	1	FSM	ENSG00000202538.1	ENST00000365668.1	141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAATTTTTAAAAGTCTAA	-120290704	True	NA	-9	True	AATATA	-37	NA	120291903	120291762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120291800_120291900
transcript_36793.known	chr12	-	141	1	FSM	ENSG00000200795.1	ENST00000363925.1	141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATTTTCTTGCAGTTGA	-120292575	True	NA	NA	False	AATATA	-37	NA	120293237	120293096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120293100_120293200
transcript_36795.nnic	chr12	+	941	4	NNC	ENSG00000089163.4	novel	1217	4	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	canonical	1	3	junction_2	5.79271573232759	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGAAATGCTTCATGAAT	120302163	True	NA	13	True	AATAAA	-16	NA	120302315	120313241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_120302379_120303560_120303786_120312455_120312751_120312883
transcript_36797.known	chr12	+	1217	4	FSM	ENSG00000089163.4	ENST00000202967.4	1217	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	4.78423336480244	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCATGAATTTGTGTGT	120302168	True	NA	21	True	AATAAA	-24	NA	120302320	120313249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120302379_120303560_120304059_120312455_120312751_120312883
transcript_368.known	SIRV5	+	1984	18	FSM	SIRV5A	SIRV502	1984	18	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_4	3929.46167897146	2783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTTACCGCCAAAAAATG	NA	False	NA	NA	False	NA	NA	NA	1019	10989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2489_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_3680.known	chr1	+	2744	5	FSM	ENSG00000198492.16	ENST00000373812.8	2744	5	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	84.4463587136829	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28727221	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28737148_28737657_28737683_28738258_28738339_28742402_28743987_28768928
transcript_36807.nic	chr12	+	1145	2	ISM	ENSG00000089163.4	ENST00000202967.4	1217	4	-5	8607	0	584	5prime_fragment	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	GAAAAAAAGAAAAAAAAAAG	120302163	True	NA	NA	False	NA	NA	NA	120302315	120304642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_120302379_120303560
transcript_36811.known	chr12	-	1152	4	FSM	ENSG00000111786.9	ENST00000229390.8	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	3862	junction_2	305.375179083042	2067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATGTGTGGTTGTCCT	-120437366	True	NA	-5	True	AATATA	-18	NA	120469748	120461671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120462163_120463949_120464123_120465626_120465788_120469421
transcript_36817.known	chr12	-	1153	2	FSM	ENSG00000170855.4	ENST00000302432.3	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATACTTGGAATAGCTGTG	-120443565	True	NA	NA	False	NA	NA	NA	120446370	120444207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120444956_120445965
transcript_36818.known	chr12	-	946	2	FSM	ENSG00000111786.9	ENST00000546942.1	946	2	0	0	0	0	multi-exon	FALSE	canonical	3	4321	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGATGAAATGCTAAACT	-120437336	True	NA	59	True	NA	NA	NA	120469718	120465138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120465788_120469421
transcript_36819.known	chr12	-	1704	1	FSM	ENSG00000111786.9	ENST00000548326.1	1704	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTTTAAATGTTTAGTA	-120463379	False	NA	-26	True	NA	NA	NA	120463396	120461692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120461700_120463400
transcript_36820.known	chr12	+	537	3	FSM	ENSG00000111775.3	ENST00000229379.3	537	3	0	0	0	0	multi-exon	FALSE	canonical	3	9924	junction_2	426	18407	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGTCATGAGCTGAGAG	120396065	True	NA	17	True	AATAAA	-14	NA	120438112	120440730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120438230_120438378_120438522_120440453
transcript_36821.known	chr12	-	1151	2	FSM	ENSG00000170855.4	ENST00000546954.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	735	junction_1	0	5580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTGCCTCTGGAACTCA	-120443579	True	NA	-14	True	AATAAA	-23	NA	120446384	120443963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120444956_120446225
transcript_36822.known	chr12	+	4238	4	FSM	ENSG00000257218.6	ENST00000551765.6	4238	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_2	36.6090456338624	255	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACCATGAATGCATACTT	120442224	True	NA	NA	False	AATAAA	-18	NA	120446443	120463749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120446562_120446656_120446830_120457075_120457180_120459906
transcript_36824.known	chr12	+	662	5	FSM	ENSG00000088986.11	ENST00000548342.5	662	5	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	1657.89271365791	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATCCATCCAAAAACAAGGA	120469648	False	NA	NA	False	NA	NA	NA	120469882	120498237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120470105_120488116_120488178_120488577_120488654_120496415_120496554_120498072
transcript_36839.known	chr12	-	1214	2	FSM	ENSG00000248008.4	ENST00000668253.2	1218	2	0	4	0	-4	multi-exon	FALSE	canonical	3	76	junction_1	0	367	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCCTCAGGTTCCTCAT	NA	False	NA	-3	True	ATTAAA	-18	NA	120495946	120491020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120492111_120495822
transcript_36840.known	chr12	+	663	3	FSM	ENSG00000088986.11	ENST00000242577.11	663	3	0	0	0	0	multi-exon	FALSE	canonical	3	3763	junction_1	38	36821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120444868	True	NA	13	True	AATAAA	-16	NA	120496112	120498493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120496217_120496415_120496554_120498072
transcript_36841.known	chr12	+	814	3	FSM	ENSG00000088986.11	ENST00000392509.6	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	1901.5	1598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTGTGTGAATTACAATT	120469615	True	NA	13	True	AATAAA	-16	NA	120469849	120498493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120470105_120496415_120496554_120498072
transcript_36842.known	chr12	+	595	3	FSM	ENSG00000088986.11	ENST00000552870.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1881.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAATCTGATGCAGATGT	120444868	True	NA	-8	True	TTTAAA	-2	NA	120496112	120498472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120496217_120496415_120496554_120498119
transcript_36843.known	chr12	+	719	2	FSM	ENSG00000088986.11	ENST00000549989.1	719	2	0	0	0	0	multi-exon	FALSE	canonical	3	3839	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTCTCTGTACTAGTTTG	120444868	True	NA	-18	True	NA	NA	NA	120496112	120498350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120496554_120498072
transcript_3685.nnic	chr1	+	698	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	143	12	intron_retention	FALSE	canonical	3	74	junction_3	464.271711632555	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAACTAAACA	28736033	False	NA	NA	False	AATGAA	-9	NA	28736763	28769137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_36852.known	chr12	-	701	2	FSM	ENSG00000110871.15	ENST00000547448.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACAAAAAAATTAGCCGGG	-120522403	True	NA	NA	False	ACTAAA	-2	NA	120529154	120526892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120527379_120528939
transcript_36853.known	chr12	-	1506	7	FSM	ENSG00000110871.15	ENST00000288532.11	1506	7	0	0	0	0	multi-exon	TRUE	canonical	3	341	junction_5	23.0849879070072	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTTGTCATTTTTTCT	-120522407	True	NA	-5	True	AGTAAA	-17	NA	120529158	120503278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120503886_120503969_120504082_120504894_120504984_120510016_120510124_120516566_120516789_120522213_120522364_120528939
transcript_36854.known	chr12	+	760	5	FSM	ENSG00000022840.17	ENST00000535470.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	428.099506540244	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAGATCTCTTCCTGCCAA	120565413	False	NA	15	True	AATAAA	-11	NA	120565435	120576882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120565530_120566824_120566981_120575630_120575689_120575791_120575951_120576589
transcript_36855.known	chr12	+	661	5	FSM	ENSG00000022840.17	ENST00000538254.1	661	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	449.144951546825	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTCTTCCTGCCAAGGTT	120565461	False	NA	19	True	AATAAA	-15	NA	120565483	120576886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120565530_120571190_120571292_120575630_120575689_120575791_120575951_120576589
transcript_36856.known	chr12	-	821	4	FSM	ENSG00000167272.11	ENST00000542776.5	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_3	147.443397802532	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTAGCATACTTATATT	-120574967	True	NA	-49	True	AATAAA	-18	NA	120581336	120579047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120581114
transcript_3686.nnic	chr1	+	1479	4	NIC	ENSG00000198492.16	novel	2744	5	NA	NA	0	0	intron_retention	FALSE	canonical	3	74	junction_3	464.271711632555	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28735890	True	NA	22	True	AATAAA	-23	NA	28736620	28769775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_28737148_28737657_28737683_28738258_28738339_28768928
transcript_36861.known	chr12	-	794	5	FSM	ENSG00000167272.11	ENST00000543355.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	413.762839679931	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTTACCTAGCATTCCC	-120575012	True	NA	-155	True	NA	NA	NA	120581381	120579153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120579413_120579513_120579598_120579773_120579924_120580995_120581258_120581342
transcript_36863.known	chr12	+	1369	7	FSM	ENSG00000157782.10	ENST00000288616.7	1369	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	16.8893457540545	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGCCCACCCCGGACCCC	120650012	False	NA	NA	False	NA	NA	NA	120650084	120667032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120650683_120656092_120656273_120659877_120659909_120660195_120660340_120660730_120660841_120661070_120661219_120666874
transcript_36864.known	chr12	-	1015	2	FSM	ENSG00000256008.3	ENST00000540369.2	1015	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGCCTGAACTTTCTTG	NA	False	NA	0	True	AATAAA	-23	NA	120641591	120629610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120630497_120641462
transcript_36865.known	chr12	-	496	2	FSM	ENSG00000256008.3	ENST00000544339.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGAGACCACAATC	-120639949	False	NA	NA	False	ATTAAA	-25	NA	120640153	120630104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_120630497_120640049
transcript_36869.known	chr12	+	6341	5	FSM	ENSG00000110917.8	ENST00000228506.8	6341	5	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_2	51.0899941280091	376	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTTGGGACTGAGTT	120651873	True	NA	45	True	AATAAA	-16	NA	120687148	120701859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120687532_120694090_120694270_120694823_120695001_120695094_120695153_120696315
transcript_36870.known	chr12	+	4381	5	FSM	ENSG00000175970.11	ENST00000344651.5	4381	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	6.72681202353685	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTCTCCCTCGTCCTGTCTC	120703125	True	NA	11	True	AATAAA	-19	NA	120710457	120723640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120710719_120713273_120713388_120716627_120716740_120716869_120717043_120719919
transcript_36871.known	chr12	+	1859	10	FSM	ENSG00000122971.9	ENST00000242592.9	1859	10	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_4	11.4611528517579	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTCCTCGCCCTCTC	120725368	True	NA	10	True	AATAAA	-16	NA	120725825	120740008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_120725932_120727025_120727190_120736985_120737136_120737355_120737468_120737836_120737989_120738279_120738451_120738532_120738671_120738819_120738916_120739139_120739197_120739295
transcript_36873.known	chr12	-	4469	6	FSM	ENSG00000157895.11	ENST00000288757.7	4469	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	35.9444015112229	1825	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGACTGATGGCAATGGT	-121012232	True	NA	2	True	AATAAA	-27	NA	121016487	121000485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121004490_121005002_121005094_121006320_121006395_121010827_121010927_121011103_121011147_121016329
transcript_36876.known	chr12	+	1836	13	FSM	ENSG00000135124.16	ENST00000359949.11	1836	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	33.8472877626685	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATCGAGGACCAGACATTAA	121210054	False	NA	-32	True	NA	NA	NA	121210064	121234070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121216954_121217003_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36877.known	chr12	+	1084	12	FSM	ENSG00000135124.16	ENST00000542067.5	1084	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	30.338585202117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTACCCCACACCTGG	121208357	False	NA	NA	False	NA	NA	NA	121210164	121233547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121222963_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36879.known	chr12	+	1760	12	FSM	ENSG00000135124.16	ENST00000337233.9	1760	12	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_7	9.85682630431258	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121217133_121217282_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_3688.known	chr1	+	2719	4	FSM	ENSG00000198492.16	ENST00000541996.5	2719	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	552.792506783111	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTAGTACCATTTAGTAT	28727221	True	NA	22	True	AATAAA	-23	NA	28736939	28769775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28737148_28738258_28738339_28742402_28743987_28768928
transcript_36885.known	chr12	+	1612	11	FSM	ENSG00000135124.16	ENST00000543984.5	1612	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	28.1424945589406	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208321	True	NA	4	True	ATTAAA	-16	NA	121210128	121234106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121210299_121221912_121221985_121222093_121222167_121222946_121223044_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36892.nic	chr12	+	1397	8	NIC	ENSG00000135124.16	novel	1612	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	33.0787557449287	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGTTGTCTCATA	121208294	True	NA	4	True	ATTAAA	-16	NA	121210101	121234106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_121210299_121228532_121228614_121228724_121228867_121228962_121229100_121232413_121232508_121232610_121232677_121232996_121233093_121233522
transcript_36896.known	chr12	-	2006	16	FSM	ENSG00000110931.19	ENST00000412367.6	2006	16	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	16.8673254153309	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	-121295392	True	NA	19	True	TTTAAA	-20	NA	121296686	121240524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121296637
transcript_36897.known	chr12	-	5304	16	FSM	ENSG00000110931.19	ENST00000337174.7	5304	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	39.9062234077176	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCCTGGGCCTCTTGG	NA	False	NA	-22	True	AATAAA	-17	NA	121298057	121237696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121274055_121274586_121297538
transcript_36899.nnic	chr12	-	1514	15	NIC	ENSG00000110931.19	novel	2006	16	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	23	junction_14	35.6173684987467	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTGACTCCATGACGTC	-121295430	True	NA	19	True	TTTAAA	-20	NA	121296724	121240524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121240870_121245139_121245241_121248605_121248735_121249786_121249875_121249960_121250035_121252660_121252715_121253272_121253473_121255549_121255639_121255782_121255805_121260318_121260356_121263805_121263940_121268637_121268690_121269527_121269582_121270897_121270946_121296637
transcript_36909.known	chr12	-	2400	17	FSM	ENSG00000089053.13	ENST00000541887.5	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_8	175.936323264271	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTTATTTTGTTGCT	-121341331	True	NA	-26	True	AATAAA	-15	NA	121352388	121308356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328459_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_36912.known	chr12	-	2574	17	FSM	ENSG00000089053.13	ENST00000261819.8	2574	17	0	0	0	0	multi-exon	TRUE	canonical	3	532	junction_8	135.416025639508	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTGCAAGCATCTCAGA	-121341354	True	NA	86	True	AATAAA	-19	NA	121352411	121308244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121308692_121309700_121309864_121318276_121318425_121318500_121318609_121319696_121319819_121320384_121320460_121327095_121327232_121328315_121328498_121330582_121330673_121331346_121331429_121335532_121335724_121337290_121337393_121342002_121342070_121345838_121346032_121346895_121347006_121347801_121347882_121352133
transcript_36934.known	chr12	-	677	5	FSM	ENSG00000089053.13	ENST00000536416.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	464.251211630083	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTAATTTGGCTTTTCTGAC	-121341360	True	NA	NA	False	AAAAAG	-22	NA	121352417	121345839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121345952_121346035_121346127_121346895_121347006_121347801_121347882_121352133
transcript_36941.nnic	chr12	-	1559	11	NNC	ENSG00000089094.20	novel	892	7	NA	NA	-98	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	129.407264092863	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCATCAGCATTTGTT	-121579633	False	NA	-13	True	AATAAA	-21	NA	121579742	121516388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_121516864_121516999_121517032_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_36942.nnic	chr12	-	1659	11	NNC	ENSG00000089094.20	novel	892	7	NA	NA	-25	-42	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	127.201768855626	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCATCAGCATTTGTT	-121577401	True	NA	-13	True	AATAAA	-21	NA	121580250	121516388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_121516864_121516999_121517032_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_36948.nic	chr12	-	1569	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	118.508112969139	79	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-121579633	False	NA	29	True	NA	NA	NA	121579742	121516346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_36949.nic	chr12	-	1957	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-79	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	115.089766360818	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-121580429	False	NA	29	True	NA	NA	NA	121580538	121516346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_36950.nic	chr12	-	1184	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-98	-42	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	119.811889597355	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCATCAGCATTTGTT	-121579633	False	NA	-13	True	AATAAA	-21	NA	121579742	121516388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516521_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121579611
transcript_36951.nic	chr12	-	1286	10	NIC	ENSG00000089094.20	novel	892	7	NA	NA	-27	-42	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	116.461512743985	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTCATCAGCATTTGTT	-121577403	True	NA	-13	True	AATAAA	-21	NA	121580252	121516388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121516521_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578801_121578947_121580019
transcript_36953.nnic	chr12	-	1522	9	NNC	ENSG00000089094.20	novel	892	7	NA	NA	1021	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	127.119038699952	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTCAGCAACAAAGAAGGG	-121578514	False	NA	29	True	NA	NA	NA	121578623	121516346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_121516864_121520984_121521101_121532805_121532960_121534496_121534591_121548876_121548984_121549459_121549639_121574546_121574594_121575780_121575860_121578394
transcript_36976.known	chr12	+	2051	7	FSM	ENSG00000170633.17	ENST00000392465.7	2051	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	183.558044104734	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTACATTGTCTTGG	121392482	True	NA	24	True	AATAAA	-16	NA	121400118	121424348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121402741_121402808_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_3698.known	chr1	+	358	3	FSM	ENSG00000198492.16	ENST00000475796.5	358	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAATTTCTTTCCCAGTG	28737313	True	NA	NA	False	NA	NA	NA	28737749	28742632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_28737798_28738258_28738339_28742402
transcript_36981.known	chr12	+	2066	6	FSM	ENSG00000170633.17	ENST00000361234.10	1986	6	-77	-3	-42	-1	multi-exon	FALSE	canonical	3	433	junction_1	16.2308348522188	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACATTGTCTTGGTCA	121392404	True	NA	27	True	AATAAA	-19	NA	121400040	121424351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121416158_121416378_121417503_121417912_121420241_121420335_121420576_121420779_121423385
transcript_36997.known	chr12	+	1449	5	FSM	ENSG00000170633.17	ENST00000613529.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	190.469649813297	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACATTGTCTTGGTCAG	121392446	True	NA	28	True	AATAAA	-20	NA	121400082	121424352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121417860_121417912_121420241_121420335_121420576_121420779_121423385
transcript_37.known	ERCC-00078	+	977	1	FSM	ERCC-00078A	DQ883673	977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00078_+_0_1000
transcript_37015.known	chr12	+	593	2	FSM	ENSG00000170633.17	ENST00000555076.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATCCTATTTTTAACTTAA	121392510	True	NA	NA	False	NA	NA	NA	121400146	121423906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121400219_121423385
transcript_3702.known	chr1	-	2300	6	FSM	ENSG00000116350.18	ENST00000373795.7	2300	6	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_1	61.8721261958889	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATGGTGTTTGAATTGA	-29168801	True	NA	-5	True	AATAAA	-22	NA	29181900	29147742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29149227_29150102_29150193_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_37029.known	chr12	-	879	6	FSM	ENSG00000139714.12	ENST00000542364.1	879	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.01980390271856	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAAGCCTGGGCCTATGGG	-121672505	True	NA	NA	False	AATAAA	-15	NA	121672631	121651391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121651645_121652727_121652809_121654273_121654434_121659190_121659349_121669338_121669513_121672578
transcript_3703.known	chr1	-	1264	5	FSM	ENSG00000116350.18	ENST00000466448.4	1264	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	263.705801983953	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTCCGTGTCAAAGGAGCG	-29168783	True	NA	NA	False	NA	NA	NA	29181882	29148670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29149227_29154695_29154911_29159373_29159487_29160374_29160518_29181645
transcript_37030.known	chr12	+	7510	12	FSM	ENSG00000188735.13	ENST00000449592.7	7510	12	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_8	20.1124935474002	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTCTGACTGTGATTC	121708140	True	NA	19	True	AGTAAA	-20	NA	121712751	121782068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121712965_121743628_121743748_121748325_121748443_121750379_121750440_121752127_121752224_121761648_121761739_121770906_121770973_121771487_121771550_121773420_121773514_121774657_121774723_121775061_121775131_121775608
transcript_37040.known	chr12	-	2435	5	FSM	ENSG00000139725.8	ENST00000267205.7	2435	5	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	26.1569780364629	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCATTCCTTTCTGCATT	-121792359	True	NA	-5	True	AATAAA	-21	NA	121793688	121777753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121779663_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_37042.nnic	chr12	-	817	5	NNC	ENSG00000139725.8	novel	1485	4	NA	NA	-4	93	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	62.4379692174561	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTCACAAGAAATAACCAT	-121793662	False	NA	20	True	AATAAA	-33	NA	121793692	121780393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_121780681_121780871_121781007_121781082_121781193_121793151_121793240_121793495
transcript_37045.nic	chr12	-	1040	5	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	0	0	intron_retention	FALSE	canonical	3	25	junction_1	10.6858551365813	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121802578	True	NA	0	True	AATAAA	-19	NA	121802946	121795266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802630
transcript_37046.nic	chr12	-	806	5	NIC	ENSG00000212694.8	novel	1521	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	17.3637553541853	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121802874	False	NA	0	True	AATAAA	-19	NA	121802960	121795266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121802878
transcript_37047.nnic	chr12	-	854	5	NNC	ENSG00000212694.8	novel	1521	7	NA	NA	-230	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	17.7112252540585	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121803090	False	NA	0	True	AATAAA	-19	NA	121803176	121795266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_121795727_121796190_121796243_121799846_121799957_121801706_121801809_121803046
transcript_37052.known	chr12	-	1485	4	FSM	ENSG00000139725.8	ENST00000537171.5	1485	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	19.7709101684492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTCCCCTTCACGGGCCA	-121794106	False	NA	-73	True	NA	NA	NA	121794262	121780486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121781007_121781082_121781193_121793151_121793240_121793495
transcript_37055.known	chr12	-	479	4	FSM	ENSG00000212694.8	ENST00000537157.5	479	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.2341444115106	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAACTCCATGATCTGACC	-121800851	False	47	NA	False	NA	NA	NA	121801007	121795569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121795727_121796190_121796243_121799846_121799957_121800847
transcript_37058.known	chr12	-	875	4	FSM	ENSG00000212694.8	ENST00000541694.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	10.8730042868667	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTCTGTGCAAGCTTGT	-121802575	True	NA	NA	False	NA	NA	NA	121802943	121795892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802630
transcript_37059.known	chr12	-	1220	4	FSM	ENSG00000212694.8	ENST00000542933.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	20.0055547841649	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGAGTTGCTGTGCATT	-121802824	False	NA	0	True	AATAAA	-19	NA	121802910	121795266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121796243_121799846_121799957_121801706_121801809_121802878
transcript_37065.known	chr12	-	1419	14	FSM	ENSG00000158104.11	ENST00000289004.8	1419	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.72160242458822	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGTGTCTGTGTTTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	121858859	121839526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_121839839_121839931_121840049_121843709_121843833_121846861_121846934_121847051_121847215_121848998_121849077_121849686_121849791_121854702_121854793_121856323_121856407_121856582_121856626_121857327_121857433_121857756_121857820_121858686_121858714_121858820
transcript_37069.known	chr12	+	1195	7	FSM	ENSG00000110801.14	ENST00000537407.5	1195	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	207.983973741568	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGTTGTCACCCCAGCTG	121883524	True	NA	24	True	AATAAA	-23	NA	121888731	121916644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121910941_121911007_121915855_121915945_121916283
transcript_37076.known	chr12	+	2725	6	FSM	ENSG00000110801.14	ENST00000541212.6	2725	6	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	11.1642285895623	1863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCGAGTTCATACTTCTC	121883582	True	NA	NA	False	NA	NA	NA	121888789	121918297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899846_121903005_121903108_121915855_121915945_121916283
transcript_37078.known	chr12	+	1001	6	FSM	ENSG00000110801.14	ENST00000543699.5	1001	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	179.209821159444	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTACTGGTGTGATTATT	121883637	True	NA	9	True	NA	NA	NA	121888844	121916584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121899633_121899890_121903005_121903108_121915855_121915945_121916283
transcript_37081.known	chr12	+	793	5	FSM	ENSG00000110801.14	ENST00000540962.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	192.321833133942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGATTGTGGGCAAGTGGG	121883554	True	NA	-26	True	NA	NA	NA	121888761	121916549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121903005_121903108_121915855_121915945_121916283
transcript_37085.known	chr12	+	516	4	FSM	ENSG00000110801.14	ENST00000542602.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	212.870852866239	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAAGGATCTGGAAGAGGC	121883578	True	NA	NA	False	NA	NA	NA	121888785	121916399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121903005_121903108_121915855_121915945_121916283
transcript_37086.known	chr12	+	492	2	FSM	ENSG00000158023.10	ENST00000545988.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGACATTCCACTGTTTC	NA	False	NA	NA	False	ATTAAA	-33	NA	122001703	122003927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122001920_122003651
transcript_37087.known	chr12	+	534	3	FSM	ENSG00000110801.14	ENST00000538613.5	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGGCCACTCAAGTCC	121883576	True	NA	NA	False	NA	NA	NA	121888783	121899853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121888995_121894738_121894842_121899633
transcript_37088.known	chr12	+	3420	18	FSM	ENSG00000158023.10	ENST00000397454.2	3420	18	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_16	4.56024645725042	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCAGTCTCAGTTATGT	121918247	True	NA	6	True	AATAAA	-18	NA	121918591	121972069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_121918709_121921285_121921684_121923621_121923991_121931745_121931887_121934246_121934357_121942533_121942646_121942894_121942976_121948983_121949062_121951479_121951531_121954119_121954335_121957073_121957269_121958271_121958523_121958942_121959095_121960584_121960759_121961977_121962163_121966954_121967070_121968005_121968170_121971557
transcript_37089.nnic	chr12	+	703	4	NNC	ENSG00000110987.9	novel	871	4	NA	NA	-6	-8551	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	53.4935094712953	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGATTTTGTTTGTTTGTT	122018876	True	NA	41	True	TATAAA	-45	NA	122021971	122035820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_122022184_122030699_122030782_122035330_122035428_122035508
transcript_37090.known	chr12	+	871	4	FSM	ENSG00000110987.9	ENST00000432926.2	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	19.4821855949366	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGCACACACCTGTGATCC	122018882	True	NA	NA	False	NA	NA	NA	122021977	122044371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122022184_122030699_122030782_122035330_122035428_122043885
transcript_37092.nnic	chr12	+	995	4	NNC	ENSG00000256546.3	novel	850	3	NA	NA	-12	6114	intron_retention	FALSE	non_canonical	0	0	junction_3	20.3141986469235	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTATTGCTGCTTT	NA	False	NA	14	True	AATAAA	-31	NA	122064264	122074730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_122064683_122068027_122068192_122068288_122068634_122074662
transcript_37095.nic	chr12	+	720	4	ISM	ENSG00000256546.3	ENST00000540968.2	1055	5	932	10	4	0	3prime_fragment	FALSE	canonical	1	11	junction_1	16.6799946709291	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCACAAAATTCACTCAAA	122063285	True	NA	5	True	ATTAAA	-17	NA	122064280	122068558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_122064434_122064549_122064683_122068027_122068192_122068288
transcript_37096.nic	chr12	+	923	4	ISM	ENSG00000256546.3	ENST00000540968.2	1055	5	932	-193	4	145	3prime_fragment	FALSE	canonical	1	11	junction_1	16.6799946709291	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACATATAAAGAACTCTCT	122063285	True	NA	NA	False	GATAAA	-14	NA	122064280	122068761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_122064434_122064549_122064683_122068027_122068192_122068288
transcript_37099.known	chr12	+	850	3	FSM	ENSG00000256546.3	ENST00000653475.1	850	3	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_1	16	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCACTCAAAATAGATCATA	122063281	True	NA	15	True	ATTAAA	-27	NA	122064276	122068568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122064683_122068027_122068192_122068288
transcript_37103.known	chr12	+	436	2	FSM	ENSG00000256546.3	ENST00000535337.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATCACAAAATTCACTCAAA	122067030	False	NA	5	True	ATTAAA	-17	NA	122068025	122068558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122068192_122068288
transcript_37105.known	chr12	+	2022	12	FSM	ENSG00000158113.13	ENST00000339777.5	2022	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.12815214963553	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCCTCCGCTTCTGTC	122183106	True	NA	NA	False	AGTAAA	-15	NA	122183122	122203471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122183295_122184518_122184780_122186189_122186301_122187700_122187841_122190129_122190369_122191379_122191568_122192744_122193005_122200188_122200331_122200531_122200661_122200745_122200935_122201295_122201330_122203314
transcript_37106.known	chr12	-	2495	14	FSM	ENSG00000139719.11	ENST00000544349.6	2495	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	154.186009234907	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTCATCCTCTAATCCC	-122262390	False	NA	-18	True	AATAAA	-6	NA	122266336	122231562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122264711_122264805_122266306
transcript_37113.known	chr12	-	732	6	FSM	ENSG00000184047.20	ENST00000541656.6	732	6	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_5	232.810652677235	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTCTCCCGGAAAGCAGAA	-122216405	True	NA	NA	False	NA	NA	NA	122225973	122208505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225786
transcript_37114.known	chr12	-	1336	6	FSM	ENSG00000184047.20	ENST00000342392.3	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	247.787489595419	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACAGGCCTCTTGTTCCTTC	-122216484	True	NA	-25	True	NA	NA	NA	122226052	122207773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644_122224749_122225964
transcript_37119.known	chr12	-	1429	6	FSM	ENSG00000184047.20	ENST00000540535.6	1429	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	239.731182786053	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACCTGGTGCTCTCAAC	-122216454	True	NA	14	True	NA	NA	NA	122226022	122207818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225825
transcript_37125.known	chr12	-	1859	5	FSM	ENSG00000184047.20	ENST00000443649.9	1859	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	264.581154846675	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCAGCCTCCTTCCTTGAG	-122226536	False	NA	0	True	NA	NA	NA	122226568	122207662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122225964
transcript_37126.known	chr12	-	555	5	FSM	ENSG00000184047.20	ENST00000541273.6	555	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	271.366334500063	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCAGGAGGCCTACCTGCGT	-122216471	True	NA	NA	False	AAAACA	-32	NA	122226039	122208409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224644_122224749_122225964
transcript_37134.known	chr12	+	2891	3	FSM	ENSG00000176383.9	ENST00000324189.5	2891	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	122203494	True	NA	NA	False	AATAAA	-21	NA	122203708	122208952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122204521_122204685_122206317
transcript_37135.known	chr12	+	552	3	FSM	ENSG00000176383.9	ENST00000537991.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTACCCACCCTATGCTGGT	122203531	True	NA	NA	False	NA	NA	NA	122203745	122207062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122204521_122204685_122206729
transcript_37136.known	chr12	+	663	3	FSM	ENSG00000176383.9	ENST00000545141.1	663	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTGACTAATCTTTAA	122203514	True	NA	NA	False	AATAAA	-21	NA	122203728	122208952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122207695_122207813_122208479
transcript_37137.known	chr12	+	2749	2	FSM	ENSG00000176383.9	ENST00000546192.1	2749	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTCATCACCTTGACTAA	NA	False	NA	NA	False	AATAAA	-14	NA	122203680	122208945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122203802_122206317
transcript_37138.known	chr12	-	1338	5	FSM	ENSG00000184047.20	ENST00000353548.11	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	240.992090119157	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCTATGCAGCCTCCTTC	-122216484	True	NA	-6	True	NA	NA	NA	122226052	122207668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122224511_122224645_122225964
transcript_37139.known	chr12	-	1471	6	FSM	ENSG00000184047.20	ENST00000464942.7	1471	6	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_4	66.7311021938046	1047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTATGCAGCCTCCTTCC	-122216484	True	NA	-5	True	NA	NA	NA	122226052	122207667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_37140.known	chr12	-	1418	7	FSM	ENSG00000184047.20	ENST00000267169.11	1418	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	258.274832085685	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATCAACAGGACTTAA	-122216471	True	NA	39	True	NA	NA	NA	122226039	122207793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122209772_122209859_122216487_122216585_122216758_122216870_122218265_122218398_122224511_122224645_122225964
transcript_37141.known	chr12	-	1523	7	FSM	ENSG00000184047.20	ENST00000644227.1	1523	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	281.937000449076	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGAGAAAATGCGTCTC	-122216465	True	NA	-32	True	NA	NA	NA	122226033	122207694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122220529_122220628_122224511_122224645_122225964
transcript_37142.known	chr12	-	4559	13	FSM	ENSG00000139719.11	ENST00000267199.9	4559	13	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_1	52.4711560976335	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTTGTGTCTTGCTATA	-122262548	True	NA	-34	True	AATAAA	-17	NA	122266494	122229563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122232428_122232799_122232969_122235785_122235924_122238586_122238725_122239877_122239946_122242381_122242509_122244568_122244763_122249870_122250046_122250982_122251100_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_37143.known	chr12	-	1173	5	FSM	ENSG00000139719.11	ENST00000451053.3	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	212.017098367089	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTATGTTTCAGGTA	-122262470	True	NA	1	True	AATAAA	-20	NA	122266416	122252861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122253544_122261260_122261448_122263571_122263700_122264133_122264200_122266306
transcript_37144.known	chr12	-	2569	5	FSM	ENSG00000184047.20	ENST00000644509.1	2569	5	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	222.8530906225	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTTCCTTCCTTTCTT	-122216494	True	NA	-18	True	NA	NA	NA	122226062	122207766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122208578_122216487_122216585_122216758_122216870_122218265_122218398_122224644
transcript_37146.known	chr12	+	476	2	FSM	ENSG00000214760.3	ENST00000399532.3	476	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGATGTTAAAAAATAAAAT	NA	False	NA	NA	False	NA	NA	NA	122364781	122365632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122364891_122365265
transcript_37148.known	chr12	-	4255	14	FSM	ENSG00000033030.15	ENST00000672018.1	4255	14	0	0	0	0	multi-exon	TRUE	non_canonical	3	77	junction_8	25.0830572959839	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACATAGTGTTTTTAACC	-122501054	False	NA	-4	True	AATAAA	-19	NA	122501073	122471598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122474276_122477840_122477959_122478205_122478293_122480189_122480312_122481521_122481665_122481944_122482088_122482634_122482696_122483278_122483345_122483459_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_3715.nic	chr1	-	1460	11	NIC	ENSG00000116353.16	novel	2515	10	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_9	146.035920238823	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	-29227289	True	NA	-2	True	AATAAA	-24	NA	29230955	29193816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29220837_29220922_29230730
transcript_37158.nic	chr12	-	892	6	NIC	ENSG00000033030.15	novel	4255	14	NA	NA	64	-1340	intron_retention	FALSE	non_canonical	3	86	junction_1	13.8708327075198	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATCAAGTCTTCAGCCACA	-122499223	True	NA	NA	False	AATAAA	-15	NA	122501009	122483341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122483564_122489385_122489464_122490461_122490568_122492714_122492790_122498826_122498868_122500639
transcript_37162.known	chr12	+	455	1	FSM	ENSG00000275265.1	ENST00000619123.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAGCTTTGCTACAGAGA	122501166	False	NA	NA	False	AATAAA	-26	NA	122501186	122501641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122501200_122501600
transcript_37192.known	chr12	-	1956	11	FSM	ENSG00000111011.18	ENST00000433877.6	1956	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	273.596710506541	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518819	True	NA	-40	True	AATAAA	-13	NA	122526936	122505058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_37196.known	chr12	-	2001	11	FSM	ENSG00000111011.18	ENST00000532695.5	2001	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_7	264.913646307622	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518883	True	NA	-40	True	AATAAA	-13	NA	122527000	122505058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_37210.known	chr12	-	3461	10	FSM	ENSG00000111011.18	ENST00000331738.12	3461	10	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_3	132.875881934985	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTCCAAGTGATCTTC	-122518819	True	NA	NA	False	AATAAA	-18	NA	122526936	122503453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122505707_122506833_122506924_122508217_122508448_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_37219.nic	chr12	-	2271	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-15	333	combination_of_known_junctions	FALSE	canonical	3	378	junction_3	142.767703924769	804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGCATGCTTTTTGC	-122518898	True	NA	NA	False	AATAAA	-15	NA	122527015	122504725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_37228.nic	chr12	-	1926	10	NIC	ENSG00000111011.18	novel	2001	11	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	378	junction_3	142.767703924769	585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGTGTTAATTTAAG	-122518886	True	NA	-40	True	AATAAA	-13	NA	122527003	122505058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_122505707_122506833_122506924_122508217_122508451_122511108_122511189_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522300_122526847
transcript_37264.known	chr12	-	1146	9	FSM	ENSG00000111011.18	ENST00000525335.6	1146	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	339.162732880545	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAATGCTTTGGCAGGGC	-122518832	True	NA	NA	False	AATGAA	-24	NA	122526949	122508249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122508448_122511108_122511189_122514711_122514729_122515104_122515228_122517226_122517431_122518838_122519030_122521384_122521429_122522142_122522330_122526847
transcript_37265.known	chr12	-	1041	8	FSM	ENSG00000111011.18	ENST00000527399.3	1041	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	340.791395886404	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTAATTTTTTTCATTCTT	-122518878	True	NA	NA	False	AAGAAA	-8	NA	122526995	122511110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122511189_122515104_122515228_122517230_122517431_122518838_122519052_122520503_122520582_122521384_122521429_122522142_122522300_122526847
transcript_37266.known	chr12	+	6974	64	FSM	ENSG00000184445.12	ENST00000333479.12	6974	64	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	81.589336643139	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGTCCTGAATTAATAA	122523816	True	NA	23	True	AATAAA	-35	NA	122527248	122626396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122527352_122529990_122530193_122534663_122534785_122538338_122538455_122539675_122539755_122542049_122542128_122543599_122543635_122544158_122544270_122546175_122546270_122546621_122546675_122547414_122547531_122547914_122547970_122549765_122549865_122551318_122551363_122551457_122551524_122551620_122551697_122557383_122557510_122557599_122557690_122561920_122561975_122562637_122562700_122568260_122568373_122569680_122569825_122570875_122570933_122571024_122571127_122572936_122573057_122573141_122573286_122574281_122574381_122575542_122575647_122575799_122575900_122576894_122577030_122577671_122577792_122579904_122579978_122580602_122580671_122582704_122582986_122584277_122584451_122584892_122584991_122585635_122585775_122586700_122586758_122587710_122587875_122588711_122588817_122590606_122590736_122591336_122591454_122594275_122594386_122597730_122597939_122601535_122601626_122602568_122602741_122602828_122602888_122603026_122603244_122604563_122604638_122604876_122605088_122605305_122605416_122609383_122609431_122610821_122610901_122613111_122613231_122613625_122613762_122614990_122615087_122615469_122615527_122618342_122618398_122618481_122618546_122620478_122620609_122621880_122621971_122622461_122622608_122624597_122624689_122626204
transcript_37269.known	chr12	+	331	2	FSM	ENSG00000184445.12	ENST00000535410.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTTATTGGACTCCACTG	122523813	True	NA	NA	False	AATAAA	-19	NA	122527245	122527680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122527352_122527455
transcript_3727.known	chr1	-	2515	10	FSM	ENSG00000116353.16	ENST00000263702.11	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_9	38.6353640855718	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTCTCCCTTATCA	-29227268	True	NA	NA	False	NA	NA	NA	29230934	29192656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216686_29230730
transcript_37276.known	chr12	+	2719	8	FSM	ENSG00000139726.11	ENST00000280557.11	2719	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	476.037127689401	1438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTGAATCATTTTTTTAA	122720352	True	NA	17	True	ATTAAA	-18	NA	122752823	122771064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844_122762930_122765303_122765388_122767487_122767605_122768781_122768922_122769033
transcript_3728.known	chr1	-	2416	10	FSM	ENSG00000116353.16	ENST00000373791.7	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	106.842678853964	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGACTAATGCTGTAAAGA	-29227258	True	NA	-4	True	ATTAAA	-22	NA	29230924	29192872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515_29200590_29201942_29202046_29203130_29203234_29206761_29206906_29216004_29216137_29216587_29216813_29230730
transcript_37290.known	chr12	+	671	4	FSM	ENSG00000139726.11	ENST00000539463.1	671	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	567.648365334268	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGTGGTGGCAGGCACCTG	122720355	True	NA	NA	False	ACTAAA	-17	NA	122752826	122763256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122752951_122753692_122753808_122762186_122762207_122762844
transcript_37293.known	chr12	+	699	2	FSM	ENSG00000139726.11	ENST00000537955.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	3	1385	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGTTGGAGTGTTGGGTGG	122720375	True	NA	NA	False	NA	NA	NA	122752846	122754287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122752951_122753692
transcript_37294.nic	chr12	+	983	8	ISM	ENSG00000130787.14	ENST00000452196.6	2054	18	-27	3033	-3	-1008	5prime_fragment	FALSE	canonical	3	135	junction_2	6.54029893843405	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAACCCACTACTTTAC	122833061	True	NA	NA	False	AATAGA	-30	NA	122835453	122854351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042
transcript_37297.known	chr12	+	4509	32	FSM	ENSG00000130787.14	ENST00000253083.9	4509	32	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_21	18.1551298782163	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATGCCCCAGAGGGAGGG	122833064	True	NA	4	True	AATAAA	-25	NA	122835456	122862961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122835644_122848030_122848095_122848465_122848609_122848795_122848853_122849874_122849956_122850834_122850912_122851235_122851298_122854042_122854184_122854904_122854963_122855052_122855129_122855264_122855406_122855550_122855613_122855830_122855904_122855979_122856164_122856255_122856345_122856431_122856549_122856624_122856727_122857020_122857216_122858101_122858250_122858348_122858436_122858837_122858946_122859060_122859198_122859425_122859537_122859771_122859831_122860046_122860078_122860147_122860211_122860422_122860524_122860678_122860785_122860915_122861040_122861130_122861193_122861307_122861515_122861705
transcript_37298.known	chr12	-	2706	4	FSM	ENSG00000139722.7	ENST00000267202.7	2706	4	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_3	21.6999743983464	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCTGTCACTTATTTAC	-122892958	True	NA	-1	True	AATAAA	-18	NA	122896124	122865329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_122867608_122868479_122868563_122870889_122871062_122895951
transcript_37299.nnic	chr12	-	436	2	NNC	ENSG00000139722.7	novel	2706	4	NA	NA	13	-6670	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATAGTGTGTGTGTTTTTTT	-122892945	True	NA	NA	False	AATAAA	-24	NA	122896111	122876744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_122877021_122895951
transcript_37304.known	chr12	+	1949	8	FSM	ENSG00000111325.16	ENST00000538755.5	1949	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	68.9486647249019	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	122974691	False	NA	NA	False	NA	NA	NA	122974702	122979762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122977980_122978092_122978359_122978570_122978752_122979011_122979082
transcript_37306.known	chr12	+	1481	7	FSM	ENSG00000111325.16	ENST00000545317.5	1481	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	74.3985140233922	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	122974297	True	NA	8	True	AATAAA	-20	NA	122974816	122979438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976600_122976768_122976870_122976964_122978324_122978570_122978752_122979011_122979082
transcript_37310.known	chr12	+	1465	7	FSM	ENSG00000111325.16	ENST00000545612.5	1465	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	57.6155843114999	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTGGCTCAACGGTGTG	122974232	True	NA	8	True	AATAAA	-20	NA	122974751	122979438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978359_122978570_122978752_122979011_122979082
transcript_37312.known	chr12	+	1488	7	FSM	ENSG00000111325.16	ENST00000454694.6	1488	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	46.0241482509152	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGCCTCCAGAGAGCAC	122974451	False	NA	NA	False	NA	NA	NA	122974970	122979762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_37318.known	chr12	+	996	6	FSM	ENSG00000111325.16	ENST00000542117.5	996	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	49.6104827632225	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGTGAGTGTGTGACCC	122974258	True	NA	NA	False	NA	NA	NA	122974777	122979005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752
transcript_37323.known	chr12	+	1956	6	FSM	ENSG00000111325.16	ENST00000536150.5	1956	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	61.2385499501744	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTTGTGTTTGCGGCTGT	122974207	True	NA	8	True	TATAAA	-15	NA	122974726	122980043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975122_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_37340.known	chr12	+	910	6	FSM	ENSG00000182196.14	ENST00000426960.6	910	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	680.954212851349	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCCAGTCTCTTCTCA	122979132	True	NA	-97	True	NA	NA	NA	122980262	122982795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980386_122981128_122981267_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_37345.nic	chr12	+	1273	6	NIC	ENSG00000182196.14	novel	1491	6	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_1	675.953667051226	607	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980029	True	NA	17	True	ATTAAA	-17	NA	122980046	122982909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_37356.known	chr12	+	796	6	FSM	ENSG00000182196.14	ENST00000439686.6	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	598.060398287664	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGGCGGCCCAGCCTGGG	122968713	True	NA	NA	False	NA	NA	NA	122980747	122982706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980813_122981128_122981300_122981594_122981880_122981956_122982075_122982468_122982539_122982619
transcript_37359.known	chr12	+	1318	6	FSM	ENSG00000182196.14	ENST00000454885.6	1318	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	777.574330852041	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122980442	False	NA	17	True	ATTAAA	-17	NA	122980494	122982909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980888_122981128_122981267_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_37378.known	chr12	+	799	5	FSM	ENSG00000182196.14	ENST00000413381.6	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	699.168970993422	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGTGTGGCCCCTCTGCC	122979100	True	NA	NA	False	NA	NA	NA	122980230	122982538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980386_122981128_122981300_122981594_122981880_122981956_122982075_122982468
transcript_37395.known	chr12	+	1780	7	FSM	ENSG00000111325.16	ENST00000228922.11	1780	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_4	30.1298117411237	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTTTGTGTTTGCGGCT	122973465	True	NA	6	True	TATAAA	-13	NA	122975219	122980041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976971_122978441_122978570_122978752_122979011_122979082
transcript_37396.known	chr12	+	1023	6	FSM	ENSG00000182196.14	ENST00000315580.10	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	586.542888457443	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTGTTCTGTGGCTTT	122968646	True	NA	17	True	ATTAAA	-17	NA	122980680	122982909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980746_122981128_122981300_122981570_122981880_122981956_122982075_122982468_122982539_122982619
transcript_37397.known	chr12	+	1684	4	FSM	ENSG00000182196.14	ENST00000539576.5	1684	4	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_1	390.048714906228	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTTCTCTGTTCTGTGGC	122968647	True	NA	14	True	ATTAAA	-14	NA	122980681	122982906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122980746_122981128_122981880_122981956_122982539_122982619
transcript_37398.known	chr12	+	1341	6	FSM	ENSG00000111325.16	ENST00000545396.5	1341	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	62.036763294034	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGCTCAACGGTGTGC	122973484	True	NA	9	True	AATAAA	-21	NA	122975238	122979439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_122975384_122975810_122975868_122976653_122976768_122976870_122976964_122978324_122978570_122978752
transcript_37402.known	chr12	-	6369	24	FSM	ENSG00000051825.15	ENST00000606320.6	6369	24	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_15	20.5381290482242	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTAAGCAAATCTGCCACC	-123230226	True	NA	NA	False	AAAAAG	-17	NA	123233141	123154214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123156909_123160780_123160850_123161135_123161384_123162114_123162219_123163013_123163135_123163949_123164091_123165301_123165478_123166654_123166790_123176687_123176790_123179925_123179991_123181162_123181211_123194385_123194602_123198246_123198335_123202163_123202320_123202623_123203085_123203249_123203376_123210055_123210163_123214743_123214835_123218375_123218500_123221371_123221896_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_37411.known	chr12	+	1682	4	FSM	ENSG00000130921.9	ENST00000536130.2	1682	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.2052921501374	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGTAAAGTCAATTTTTAT	123231243	True	NA	7	True	AATAAA	-14	NA	123233461	123257929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123233739_123233925_123253646_123253957_123256812
transcript_37412.known	chr12	-	1161	4	FSM	ENSG00000111328.7	ENST00000538446.5	1161	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1017.84620099939	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123269208	False	NA	-33	True	AATAAA	-19	NA	123269239	123261002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123269104
transcript_37413.nnic	chr12	-	1287	4	NNC	ENSG00000111328.7	novel	1161	4	NA	NA	704	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_3	1001.34842420941	606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123270406	False	NA	-33	True	AATAAA	-19	NA	123270437	123261002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_123261804_123265195_123265323_123267184_123267283_123270176
transcript_37414.known	chr12	-	1281	4	FSM	ENSG00000111328.7	ENST00000535979.5	1281	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	969.295735171791	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTATTAAAATGTGGGTT	-123271110	False	11301	-33	True	AATAAA	-19	NA	123271141	123261002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123270886
transcript_37416.known	chr12	-	931	4	FSM	ENSG00000111328.7	ENST00000544658.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1005.11934062025	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAATGTAACTTCTTTTTT	-123272303	False	31	NA	False	NA	NA	NA	123272334	123261275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123272156
transcript_37423.known	chr12	+	1554	3	FSM	ENSG00000130921.9	ENST00000253233.6	1554	3	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_2	7	561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGGAGTCAAACATTAAT	123231217	True	NA	38	True	AATAAA	-45	NA	123233435	123257960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123253957_123256812
transcript_37425.known	chr12	+	1634	3	FSM	ENSG00000130921.9	ENST00000538888.6	1634	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	93	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGAGGGGTTCTGGGGTG	123231217	True	NA	NA	False	NA	NA	NA	123233435	123257797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123254200_123256812
transcript_37426.known	chr12	+	2648	3	FSM	ENSG00000130921.9	ENST00000425637.3	2648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTAGTAAAGTCAATTTT	123233228	False	NA	4	True	AATAAA	-11	NA	123233384	123257926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233532_123253646_123255034_123256812
transcript_37428.known	chr12	+	2056	3	FSM	ENSG00000130921.9	ENST00000366329.7	2056	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	83	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCGGGCATGGTGGCTC	123231227	True	NA	NA	False	AAAACA	-1	NA	123233445	123258079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123233925_123253646_123253957_123256812
transcript_37430.known	chr12	-	1054	1	FSM	ENSG00000280120.1	ENST00000625082.1	1054	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCGTGTGGCCTTTGTGT	-123153367	False	NA	-5	True	AATAAA	-17	NA	123153377	123152323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123152300_123153400
transcript_37431.known	chr12	-	1346	4	FSM	ENSG00000111328.7	ENST00000261692.7	1346	4	0	0	0	0	multi-exon	FALSE	canonical	3	1677	junction_3	227.592227947754	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTACGTGCTGTTTTATT	-123260555	True	NA	-6	True	ATTAAA	-17	NA	123271856	123260975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123261804_123265195_123265323_123267184_123267283_123271563
transcript_37432.known	chr12	-	570	5	FSM	ENSG00000051825.15	ENST00000541437.5	570	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	44.2125547780266	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAACCAGACTGCAATGTGG	-123230192	True	NA	NA	False	AATACA	-19	NA	123233107	123221692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123221724_123223037_123223128_123227462_123227617_123230260_123230523_123233074
transcript_37439.nic	chr12	-	2542	18	ISM	ENSG00000139697.14	ENST00000267176.8	11121	32	-29	31708	-25	-31708	5prime_fragment	FALSE	canonical	3	29	junction_15	11.0853873702631	164	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGTATAGATCCAGA	-123359418	True	NA	NA	False	AAAAAG	-1	NA	123364872	123320816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345568_123348028_123348134_123350309_123350442_123364700
transcript_37440.nic	chr12	-	2545	18	ISM	ENSG00000139697.14	ENST00000602398.3	11128	32	-25	31708	-25	-31708	5prime_fragment	FALSE	canonical	3	27	junction_15	11.4423483446423	142	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGTATAGATCCAGA	-123359418	True	NA	NA	False	AAAAAG	-1	NA	123364872	123320816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123348028_123348134_123350309_123350442_123364700
transcript_37442.nnic	chr12	-	2440	17	NIC	ENSG00000139697.14	novel	11128	32	NA	NA	-25	-31708	combination_of_known_splicesites	FALSE	canonical	1	1	junction_15	17.0605539183228	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAAGTATAGATCCAGA	-123359418	True	NA	NA	False	AAAAAG	-1	NA	123364872	123320816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_123320867_123321534_123321733_123323679_123323832_123325501_123325600_123326151_123326335_123327425_123327580_123327706_123327813_123327891_123328028_123328733_123328896_123330418_123330510_123331241_123331376_123334052_123334214_123336394_123336492_123340987_123341089_123345257_123345571_123350309_123350442_123364700
transcript_37447.nnic	chr12	+	534	3	NNC	ENSG00000256092.3	novel	783	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGTAAAGTCATTCT	123363798	True	NA	5	True	AATAAA	-20	NA	123363864	123365789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123364008_123364989_123365116_123365524
transcript_37449.nnic	chr12	+	959	2	NNC	ENSG00000256092.3	novel	468	2	NA	NA	-3	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGAAAGTGCTGTTTGAC	123363798	True	NA	21	True	AATAAA	-36	NA	123363864	123365805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123364008_123364989
transcript_37450.known	chr12	+	752	2	FSM	ENSG00000256092.3	ENST00000543072.2	783	2	31	0	5	0	multi-exon	FALSE	canonical	3	8	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCTCTCACACACATAGAA	123364740	True	NA	NA	False	TTTAAA	-41	NA	123364952	123366113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123365116_123365524
transcript_37451.nnic	chr12	+	484	2	FSM	ENSG00000256092.3	ENST00000686582.1	468	2	-16	0	-4	0	multi-exon	FALSE	canonical	1	1	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTTTGTAAAGTCATTCT	123364851	False	NA	5	True	AATAAA	-20	NA	123364917	123365789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123365137_123365524
transcript_37452.known	chr12	+	1774	7	FSM	ENSG00000183955.14	ENST00000437519.5	1774	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	41.5989449652539	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAACCACAGAAAACAACT	123382846	True	NA	NA	False	AATAAA	-24	NA	123384165	123408507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123384209_123390629_123390787_123395046_123395267_123396344_123396433_123403572_123403633_123404883_123405075_123407492
transcript_37456.nnic	chr12	+	632	2	NNC	ENSG00000183955.14	novel	352	2	NA	NA	6	-3587	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTATTGGGTCCCTTTGT	123382818	True	NA	NA	False	AATAAA	-21	NA	123384137	123385170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123384209_123384609
transcript_37457.nnic	chr12	-	782	4	NNC	ENSG00000150977.11	novel	1752	4	NA	NA	190	-350	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	18.7320284243028	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	-123436055	True	NA	-4	True	ATTAAA	-23	NA	123436494	123415388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_123415922_123423043_123423158_123430507_123430591_123436442
transcript_37458.known	chr12	-	1752	4	FSM	ENSG00000150977.11	ENST00000280571.10	1752	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	2.62466929133727	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTTTCGCCTGCTCTGTG	-123436571	True	NA	NA	False	AGTAAA	-19	NA	123436684	123415038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123415922_123423043_123423158_123430507_123430660_123436081
transcript_37460.nnic	chr12	-	1250	3	NIC	ENSG00000150977.11	novel	1752	4	NA	NA	0	-350	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	16	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAGCTTATCTAGAGTGGT	-123436571	True	NA	-4	True	ATTAAA	-23	NA	123436684	123415388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_-_123415922_123423043_123423158_123436081
transcript_37461.known	chr12	-	3933	7	FSM	ENSG00000188026.13	ENST00000376874.9	3933	7	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_2	10.6052921799554	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTACATGTGTGTA	-123533551	True	NA	NA	False	AATAAA	-20	NA	123533719	123470053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123472683_123484179_123484273_123485632_123485806_123498543_123498766_123499417_123499537_123523494_123523646_123533173
transcript_3747.known	chr1	-	571	4	FSM	ENSG00000116353.16	ENST00000483435.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	38.5082963644055	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGAAGTCATCCCTGTCGA	NA	False	NA	-2	True	AATAAA	-24	NA	29200589	29193816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29194180_29195940_29196014_29196197_29196259_29200515
transcript_37471.known	chr12	+	2161	2	FSM	ENSG00000184209.15	ENST00000527158.2	2161	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTTCATGGACATTACT	123455570	True	NA	NA	False	TTTAAA	-42	NA	123458118	123473154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123458217_123471091
transcript_37478.known	chr12	+	2544	4	FSM	ENSG00000086598.11	ENST00000262225.8	2544	4	0	0	0	0	multi-exon	FALSE	canonical	3	3498	junction_2	283.027678269576	1194	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTGTAATGTCTCGAT	123529812	True	NA	17	True	AATAAA	-20	NA	123584551	123598582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123584817_123586746_123586940_123590341_123590450_123596604
transcript_3748.known	chr1	-	780	6	FSM	ENSG00000116353.16	ENST00000475773.5	780	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	141.501943449551	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCCCTGTCGAGAAGGA	NA	False	NA	4	True	AATAAA	-30	NA	29203201	29193810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_29194180_29195940_29196043_29196197_29196259_29200515_29200590_29201942_29202046_29203130
transcript_37481.known	chr12	+	2656	14	FSM	ENSG00000111364.16	ENST00000238146.9	2656	14	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_11	40.6003760148152	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAGTGTGTAAATGTAG	123596823	True	NA	37	True	AATAAA	-21	NA	123602098	123620943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123607524_123607599_123607663_123608679_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619431_123619725_123619963
transcript_3749.known	chr1	-	2177	8	FSM	ENSG00000162511.8	ENST00000294507.4	2177	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.59078981795143	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGGCTGATGTGTTTCT	-30757760	True	NA	-7	True	AATAAA	-16	NA	30757774	30732468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_30733918_30735172_30735266_30737603_30737700_30738939_30739063_30739808_30739938_30741639_30741717_30742455_30742550_30757658
transcript_37497.known	chr12	+	3327	13	FSM	ENSG00000111358.14	ENST00000543341.7	3327	13	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	11.4624992426996	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTTGAATTATTTCC	123630732	True	NA	19	True	AATAAA	-16	NA	123633828	123662604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_37511.known	chr12	+	1472	12	FSM	ENSG00000111358.14	ENST00000228955.11	1472	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	30.9427624082684	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTAAATGAGTAAGGAGAA	123630732	True	NA	126	True	NA	NA	NA	123633828	123660829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123654923_123654999_123655770_123655825_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_37516.known	chr12	+	790	11	FSM	ENSG00000111358.14	ENST00000536375.5	790	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	30.696742498187	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAACTGAAAGTGTCTGCC	123630748	True	NA	NA	False	AAGAAA	-2	NA	123633844	123660212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993_123651057_123652531_123652562_123652706_123652736_123659515_123659585_123659794_123659931_123660045_123660083_123660165
transcript_37531.known	chr12	-	2397	9	FSM	ENSG00000111361.13	ENST00000424014.7	2397	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	256.635411381594	861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGTGATCCTCCTGCCT	-123624350	True	NA	NA	False	NA	NA	NA	123633686	123620405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_123621921_123622635_123622762_123624786_123624863_123626424_123626494_123627043_123627157_123630168_123630286_123630396_123630534_123632344_123632447_123633544
transcript_37546.known	chr12	+	2767	11	FSM	ENSG00000111364.16	ENST00000542286.5	2767	11	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_10	90.8402994270715	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGAGGTAAAGTTTACT	123596801	True	NA	NA	False	AAAAAG	-34	NA	123602076	123619716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123602257_123605930_123605982_123606072_123606160_123607431_123608830_123609938_123610129_123613169_123613253_123615184_123615317_123616510_123616604_123617757_123617873_123618668_123618838_123619447
transcript_37547.known	chr12	+	558	5	FSM	ENSG00000111358.14	ENST00000537368.5	558	5	0	0	0	0	multi-exon	TRUE	canonical	3	77	junction_1	10.3440804327886	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACTCTGAAGTGGAG	123630732	True	NA	NA	False	NA	NA	NA	123633828	123651156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123633873_123639263_123639344_123645454_123645562_123647962_123648127_123650993
transcript_37548.known	chr12	+	2513	18	FSM	ENSG00000168778.13	ENST00000426174.6	2513	18	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	5.02381869948145	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	123670110	True	NA	NA	False	NA	NA	NA	123671112	123708007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123671323_123671506_123671615_123672055_123672133_123673617_123673811_123679188_123679290_123686835_123687036_123688050_123688178_123690532_123690675_123692657_123692724_123694841_123694977_123695219_123695298_123696414_123696496_123697086_123697199_123699703_123699811_123704531_123704689_123706725_123706852_123706984_123707074_123707603
transcript_37549.nnic	chr12	+	872	5	NNC	ENSG00000168778.13	novel	2374	17	NA	NA	6	3465	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	7.84219357067906	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTTTGATAACACTGA	123670118	True	NA	NA	False	AATAAA	-18	NA	123671120	123677214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123671323_123671506_123671615_123672055_123672133_123673614_123673815_123676929
transcript_3755.known	chr1	-	5385	22	FSM	ENSG00000134644.16	ENST00000426105.7	5385	22	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_5	72.2747968416612	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTGCTTTATTTTAAC	-31052355	True	NA	-2	True	AATACA	-16	NA	31065717	30931505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_30933343_30936642_30936836_30941150_30941273_30941997_30942124_30945345_30945484_30950126_30950262_30952233_30952364_30953713_30953982_30964673_30964911_30965981_30966279_30967166_30967311_30968353_30968493_30974650_30974803_30980061_30980164_30981311_30981406_30992389_30992661_30995053_30995221_31005852_31006032_31006993_31007103_31028795_31028865_31059203_31059578_31065615
transcript_37551.nnic	chr12	+	433	2	NNC	ENSG00000197653.16	novel	3484	20	NA	NA	-7	-49143	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGATGTGACTTGGATT	123762265	False	NA	6	True	ATTAAA	-23	NA	123762293	123764518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_123762551_123764342
transcript_37557.known	chr12	+	4262	5	FSM	ENSG00000179195.16	ENST00000392404.7	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	5.61248608016091	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGTGCTTGACATGTAG	123967942	True	NA	16	True	AATAAA	-17	NA	123973211	124015426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973304_123973885_123974021_123988045_123988139_124011380_124011442_124011545
transcript_37558.known	chr12	+	455	4	FSM	ENSG00000179195.16	ENST00000543017.5	455	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	9.41629792788369	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATTACTCTACAAGAGGAA	123968003	True	NA	NA	False	NA	NA	NA	123973272	124011773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973304_123973885_123974021_124011380_124011442_124011545
transcript_37560.known	chr12	+	567	4	FSM	ENSG00000179195.16	ENST00000541448.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	13.4742552876052	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTACAAGAGGAAGATTC	123967945	True	NA	NA	False	NA	NA	NA	123973214	124011778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973353_123973885_123974021_124011380_124011442_124011545
transcript_37563.known	chr12	+	753	2	FSM	ENSG00000179195.16	ENST00000540009.1	753	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	123967949	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973304_123973885
transcript_37566.known	chr12	+	802	2	FSM	ENSG00000179195.16	ENST00000542820.5	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCAGAGTAGTACATTTT	123967949	True	NA	NA	False	ATTAAA	-22	NA	123973218	123974553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_123973353_123973885
transcript_37579.known	chr12	-	3745	1	FSM	ENSG00000150991.16	ENST00000536769.1	3745	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	635	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGGTGAAGGGGGTCA	NA	False	NA	37	True	NA	NA	NA	124915348	124911603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124911600_124915300
transcript_37580.known	chr12	-	4559	27	FSM	ENSG00000150990.9	ENST00000308736.7	4559	27	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_11	21.1101997277235	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTGTTGTGGAATGCAC	-124981717	True	NA	-2	True	AATAAA	-17	NA	124989131	124946825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_124947888_124948083_124948182_124949985_124950060_124950148_124950244_124950412_124950551_124950689_124950805_124952397_124952571_124953879_124953997_124954086_124954212_124956690_124956880_124957028_124957136_124960311_124960424_124964393_124964627_124964929_124965007_124965667_124965813_124966792_124966879_124967122_124967219_124968533_124968649_124968866_124968969_124971301_124971416_124972502_124972600_124975418_124975512_124977341_124977491_124980489_124980839_124982510_124982624_124986095_124986266_124988916
transcript_37582.known	chr12	+	1911	3	FSM	ENSG00000184992.13	ENST00000672415.1	1911	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_2	11.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGAAATCTGTTGTGTCC	124991936	True	NA	NA	False	NA	NA	NA	124993704	125026499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_124994004_125012533_125012637_125024990
transcript_37584.known	chr12	+	3256	18	FSM	ENSG00000081760.17	ENST00000316519.11	3256	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_11	14.8235294117647	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATGCTGTGTGTGCAGTG	125060644	True	NA	10	True	AATAAA	-23	NA	125065434	125143316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_125065718_125073875_125073980_125076490_125076612_125086329_125086444_125091425_125091524_125102678_125102794_125102999_125103082_125107120_125107269_125114476_125114558_125118640_125118766_125124704_125124770_125124901_125125025_125128160_125128275_125129334_125129461_125134002_125134073_125134793_125134853_125136661_125136865_125142091
transcript_37588.known	chr12	-	694	2	FSM	ENSG00000250208.7	ENST00000542000.2	801	2	102	5	79	-5	multi-exon	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGTCTGCCCATCTGC	-130162094	False	NA	NA	False	AATAAA	-20	NA	130162144	130155271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_130155783_130161961
transcript_37589.known	chr12	-	427	3	FSM	ENSG00000111450.14	ENST00000540889.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAATTTTTTTTGCTAAA	-130801449	True	NA	NA	False	AATAAA	-19	NA	130801460	130798392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_130798636_130801152_130801291_130801414
transcript_37596.known	chr12	+	1475	6	FSM	ENSG00000132341.12	ENST00000541630.5	1475	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7085.33763768531	9011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATTCTTGCTGTTAAAA	130716725	True	NA	110	True	NA	NA	NA	130872065	130876733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872835_130872913_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_3760.known	chr1	-	561	3	FSM	ENSG00000134644.16	ENST00000524516.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_2	12.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGGGAAGGTTGGAGTTGT	-31052333	True	NA	NA	False	NA	NA	NA	31065695	31028757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31028865_31059203_31059578_31065615
transcript_37600.known	chr12	+	562	5	FSM	ENSG00000132341.12	ENST00000464211.6	562	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7106.1011989698	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGAAGCTGGAGCCCA	130716755	True	NA	NA	False	NA	NA	NA	130872095	130875924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872835_130872965_130874545_130874734_130875611_130875783_130875881
transcript_37603.known	chr12	+	2474	7	FSM	ENSG00000132341.12	ENST00000543796.6	2474	7	0	0	0	0	multi-exon	FALSE	canonical	3	11113	junction_1	1334.10244484197	51116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGAATCATCTCTAGT	130716725	True	NA	36	True	AATATA	-21	NA	130872065	130877678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872583_130872630_130872835_130872921_130873002_130873129_130874545_130874734_130875611_130875783_130875881
transcript_37604.known	chr12	+	572	5	FSM	ENSG00000132341.12	ENST00000536606.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	1	120	junction_3	7111.30568179993	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTGCTCTCGCCCCAC	130716706	True	NA	NA	False	NA	NA	NA	130872046	130875709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872835_130872921_130873002_130873129_130874550_130874734_130875611
transcript_37605.known	chr12	+	572	4	FSM	ENSG00000132341.12	ENST00000541679.7	572	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	6177.02972489385	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTTTCGTTTAGAATCA	130716741	True	NA	-24	True	NA	NA	NA	130872081	130876234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872583_130872630_130875654_130875783_130875881
transcript_37606.known	chr12	+	657	6	FSM	ENSG00000132341.12	ENST00000535090.5	657	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	5651.41136354451	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGGCCACTTTGCTGTT	130716735	True	NA	NA	False	NA	NA	NA	130872075	130875784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872583_130872618_130872835_130872921_130873002_130873129_130874545_130874734_130875611
transcript_37607.known	chr12	+	762	5	FSM	ENSG00000132341.12	ENST00000477395.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	11113	junction_1	1533.23357238876	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCTAGGAAGCTCATTGG	130716729	True	NA	NA	False	NA	NA	NA	130872069	130875665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_130872127_130872583_130872921_130873002_130873129_130874545_130874734_130875611
transcript_37609.known	chr12	-	978	5	FSM	ENSG00000256209.2	ENST00000669418.1	978	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTGAGTTTTATACAGTT	NA	False	NA	NA	False	AATAAA	-23	NA	131492997	131462852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_131463098_131465076_131465183_131469222_131469457_131474306_131474459_131492756
transcript_37611.known	chr12	+	3246	18	FSM	ENSG00000061936.10	ENST00000261674.9	3246	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	36.6293508345501	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCGTGGTTTCTTCCT	131707422	True	NA	17	True	AATAAA	-29	NA	131711089	131799738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131711448_131714070_131714241_131714821_131714954_131719453_131719540_131725404_131725631_131726939_131727053_131728292_131728429_131753122_131753364_131754367_131754500_131755385_131755480_131756472_131756645_131764455_131764687_131766117_131766309_131778064_131778331_131786462_131786589_131797177_131797361_131799036_131799110_131799422
transcript_37618.nnic	chr12	+	731	4	NNC	ENSG00000061936.10	novel	1576	3	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	87.1869001373231	506	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCGTGGTTTCTTCC	NA	False	NA	16	True	AATAAA	-28	NA	131796034	131799737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_131796195_131797177_131797361_131799036_131799110_131799422
transcript_37623.nnic	chr12	+	734	3	NNC	ENSG00000061936.10	novel	3246	18	NA	NA	-2	54	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	52.5	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCTTTAATACAGTTCTT	131707411	True	NA	NA	False	AATAAA	-26	NA	131711078	131714549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_131711448_131714070_131714241_131714354
transcript_37625.known	chr12	+	778	2	FSM	ENSG00000061936.10	ENST00000535399.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTTTAACAGTATCGT	131707427	True	NA	NA	False	AAAACA	-21	NA	131711094	131714495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131711448_131714070
transcript_37627.nic	chr12	+	1105	2	ISM	ENSG00000198598.7	ENST00000537848.5	711	4	4932	-741	4841	0	3prime_fragment	FALSE	canonical	3	347	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGCGGCTCGGCTGGGCTC	131849790	False	NA	7	True	NA	NA	NA	131849801	131851771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_+_131850060_131850924
transcript_37628.known	chr12	-	426	3	FSM	ENSG00000255992.1	ENST00000539078.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCAGCTGCTCCACCACAC	-131929302	False	NA	NA	False	NA	NA	NA	131929351	131924735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_131924767_131927962_131928191_131929184
transcript_3763.known	chr1	-	1615	10	FSM	ENSG00000060688.13	ENST00000263694.9	1615	10	0	0	0	0	multi-exon	FALSE	canonical	3	1358	junction_3	116.998364449896	966	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCTCACTTGTTTTT	-31286230	True	NA	-1	True	AATACA	-19	NA	31296788	31259567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31260122_31261528_31261633_31267870_31267933_31269157_31269241_31271378_31271500_31281373_31281497_31289253_31289420_31291912_31292007_31293218_31293349_31296610
transcript_37630.known	chr12	+	4041	6	FSM	ENSG00000177192.14	ENST00000376649.8	4041	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	43.2989607265579	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCCTTTCATTCTCTAAT	131917842	True	NA	5	True	AATAAA	-19	NA	131929275	131945896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_131929797_131929906_131930136_131932174_131932313_131939172_131939276_131941291_131941984_131943538
transcript_37634.nic	chr12	+	572	3	FSM	ENSG00000185684.16	ENST00000685528.1	554	3	-2	-16	-2	0	multi-exon	FALSE	canonical	2	12	junction_2	4	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTTACTGTATTGTACGC	132082814	True	NA	19	True	AATAAA	-33	NA	132084280	132085797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132084400_132085256_132085317_132085404
transcript_37635.nnic	chr12	+	523	3	NNC	ENSG00000185684.16	novel	554	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	9	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTCTCTCCTAAAATATC	132082814	True	NA	3	True	AATAAA	-17	NA	132084280	132085781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_132084400_132085256_132085317_132085437
transcript_37637.known	chr12	+	564	3	FSM	ENSG00000185684.16	ENST00000539351.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGTTACCACAGCTCTGC	132082823	True	NA	NA	False	GGGGCT	-40	NA	132084289	132085509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132084400_132084963_132085317_132085408
transcript_37649.known	chr12	+	1650	15	FSM	ENSG00000184967.7	ENST00000330579.6	1650	15	0	0	0	0	multi-exon	TRUE	canonical	3	312	junction_5	34.7269230378027	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCTCAGGGAGTGTGG	132135725	True	NA	7	True	AATAAA	-14	NA	132144456	132152468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132144606_132144853_132144975_132145558_132145666_132147280_132147389_132147632_132147783_132147879_132147980_132148071_132148107_132148608_132148660_132148783_132148896_132150980_132151042_132151257_132151369_132151483_132151645_132151737_132151821_132152083_132152198_132152281
transcript_3767.known	chr1	+	1730	8	FSM	ENSG00000121766.16	ENST00000373714.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	210.135621901278	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288418	True	NA	31	True	ACTAAA	-23	NA	31297007	31364936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297214_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_37672.known	chr12	-	1484	2	FSM	ENSG00000256576.3	ENST00000538731.3	1517	2	33	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACCGGCTGGTATTTCC	-132189501	True	NA	2	True	ATTAAA	-28	NA	132189695	132186734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132187702_132189178
transcript_37673.known	chr12	+	391	2	FSM	ENSG00000256312.1	ENST00000535242.1	391	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACCGGCAGCAGAGACGG	132190182	False	NA	NA	False	NA	NA	NA	132190212	132190997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132190334_132190727
transcript_37674.nnic	chr12	+	1174	3	NNC	ENSG00000256943.1	novel	1766	3	NA	NA	-9	2570	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCCTCAGTTTCCCCAT	132275254	True	NA	3	True	AATAAA	-14	NA	132275381	132280899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_132275837_132279965_132280115_132280329
transcript_37675.known	chr12	+	1793	1	FSM	ENSG00000277011.1	ENST00000613430.1	1793	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGATGTGGCTGAGGTG	132282726	True	NA	4	True	AATAAA	-15	NA	132282813	132284606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132282800_132284600
transcript_37677.nic	chr12	-	1078	8	ISM	ENSG00000177084.18	ENST00000537064.5	8011	49	-96	52951	-67	3317	5prime_fragment	FALSE	canonical	3	101	junction_2	8.44912747578357	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCAGTTTCTGACAGTAT	NA	False	NA	-5	True	ATTAAA	-23	NA	132687443	132677213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr12_-_132677444_132677577_132677720_132679496_132679652_132679953_132680047_132680177_132680223_132680606_132680688_132681137_132681280_132687253
transcript_37678.known	chr12	+	970	5	FSM	ENSG00000176894.10	ENST00000317479.8	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	25.2487623459052	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	132686418	True	NA	9	True	AATAAA	-21	NA	132687586	132704985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132687793_132690262_132690377_132695883_132696047_132701249_132701370_132704618
transcript_37679.known	chr12	+	632	3	FSM	ENSG00000176894.10	ENST00000543589.5	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	76	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGACTTTAATCTCTCAG	132686473	True	NA	9	True	AATAAA	-21	NA	132687641	132704985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132687793_132690262_132690377_132704618
transcript_37680.nnic	chr12	-	870	2	Antisense	novelGene_ENSG00000256632.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGAGACTTCTGCTTAAA	-132710635	True	NA	NA	False	AATAAA	-30	NA	132710779	132709657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr12_-_132710242_132710493
transcript_37685.known	chr12	-	11228	18	FSM	ENSG00000072609.18	ENST00000450056.7	11228	18	0	0	0	0	multi-exon	FALSE	canonical	2	140	junction_7	59.0464013183743	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGCTACACCTTAGGATAG	-132881461	True	NA	62	True	ATTAAA	-21	NA	132887605	132832355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869799_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_37686.known	chr12	-	2648	18	FSM	ENSG00000072609.18	ENST00000432561.6	2648	18	0	0	0	0	multi-exon	FALSE	canonical	2	49	junction_13	78.1674185880519	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGGTATAGTATGGTATTT	-132881464	True	NA	-82	True	AATATA	-27	NA	132887608	132840974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132869618_132869835_132870723_132870784_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_37692.known	chr12	-	2990	16	FSM	ENSG00000072609.18	ENST00000443047.6	2990	16	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_12	86.4181050989252	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCTCTCGTGTTGGGCTCGT	-132881459	True	NA	-6	True	AATAAA	-20	NA	132887603	132840351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132841597_132843010_132843084_132844026_132844135_132847042_132847131_132848084_132848156_132848640_132848725_132851617_132851738_132853430_132853574_132856467_132856631_132857404_132857560_132859067_132859228_132861466_132861635_132872284_132872395_132877554_132877655_132887195_132887341_132887546
transcript_37696.nic	chr12	-	1125	4	FSM	ENSG00000090615.16	ENST00000685580.1	1125	4	-4	4	-1	2	multi-exon	FALSE	canonical	3	14	junction_3	13.1993265821489	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAAATGCTTTAT	-132826629	True	NA	-8	True	AATAAA	-16	NA	132828870	132812951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132816539_132816813_132821995_132822312_132828802
transcript_37698.nnic	chr12	-	1009	4	FSM	ENSG00000090615.16	ENST00000687165.1	1001	4	-12	4	-5	2	multi-exon	FALSE	canonical	3	14	junction_3	13.735598518691	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTTGAAAATGCTTTAT	-132826633	True	NA	-8	True	AATAAA	-16	NA	132828874	132812951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132816659_132816813_132821995_132822312_132828802
transcript_377.known	SIRV5	+	2085	17	FSM	SIRV5A	SIRV508	2085	17	0	0	0	0	multi-exon	FALSE	canonical	3	2722	junction_10	3161.7140914532	3821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1008	10991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_37700.nnic	chr12	-	901	4	FSM	ENSG00000090615.16	ENST00000687165.1	1001	4	-2	102	0	35	multi-exon	FALSE	canonical	3	14	junction_3	13.735598518691	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTTTCCTAGTGCATAA	-132826623	True	NA	-1	True	AATAAA	-18	NA	132828864	132813049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132813420_132816659_132816813_132821995_132822312_132828802
transcript_37705.known	chr12	+	484	1	FSM	ENSG00000232888.4	ENST00000488441.2	484	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	149	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTGGACATCAGCCCGC	NA	False	NA	NA	False	NA	NA	NA	132825700	132826184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132825700_132826200
transcript_37707.known	chr12	+	555	2	FSM	ENSG00000236617.2	ENST00000424075.2	555	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAACTGAGTCTCTCAACG	132887725	True	NA	NA	False	AATAAA	-26	NA	132887841	132888583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132887933_132888119
transcript_37714.known	chr12	-	6156	5	FSM	ENSG00000196458.11	ENST00000392321.3	6156	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	8.04285397107271	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAGGATTCTCCCATGCCC	-132955483	True	NA	-12	True	AATAAA	-13	NA	132956306	132921461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132927163_132932712_132932806_132933034_132933156_132945620_132945798_132956242
transcript_37716.known	chr12	-	9342	5	FSM	ENSG00000196458.11	ENST00000360187.9	9342	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	8.67467578644874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGGTATCCCCAAATTAAA	-132955483	True	NA	57	True	AATAAA	-19	NA	132956306	132918305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132948147_132948271_132956242
transcript_37720.nnic	chr12	-	739	5	NNC	ENSG00000196458.11	novel	541	3	NA	NA	-14	-1521	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	9.17537465175128	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACTAATGTTGCATTTTT	NA	False	NA	NA	False	NA	NA	NA	132956320	132928192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132928463_132932712_132932806_132933034_132933156_132945620_132945798_132956242
transcript_37721.known	chr12	-	838	4	FSM	ENSG00000196458.11	ENST00000331711.11	838	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	3.74165738677394	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGCTCACGGTTCATCA	-132955468	True	NA	NA	False	NA	NA	NA	132956291	132926671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132927163_132933034_132933156_132945620_132945798_132956242
transcript_37727.nnic	chr12	-	1306	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-39	2678	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.05480466765633	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	NA	False	NA	56	True	NA	NA	NA	132956345	132942119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
transcript_37729.nnic	chr12	-	1224	4	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-39	2596	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2.05480466765633	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	NA	False	NA	-26	True	AATAAA	-25	NA	132956345	132942201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132948147_132948271_132956242
transcript_37730.nnic	chr12	-	1391	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	190	2678	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	-132955249	False	NA	56	True	NA	NA	NA	132956072	132942119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_37731.nnic	chr12	-	1158	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-14	2678	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	5.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTCCTGTTTTCATTCAT	NA	False	NA	56	True	NA	NA	NA	132956320	132942119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_37732.nnic	chr12	-	1309	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	190	2596	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	-132955249	False	NA	-26	True	AATAAA	-25	NA	132956072	132942201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132955761
transcript_37733.nnic	chr12	-	1076	3	NNC	ENSG00000196458.11	novel	1143	3	NA	NA	-14	2596	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	5.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCCTCCCAGATGCCA	NA	False	NA	-26	True	AATAAA	-25	NA	132956320	132942201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_-_132943023_132945620_132945798_132956242
transcript_37734.known	chr12	-	541	3	FSM	ENSG00000196458.11	ENST00000412621.6	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAGGTTTTCAAATTCTC	-132955439	False	823	NA	False	NA	NA	NA	132956262	132932811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_132933156_132945620_132945798_132956242
transcript_37738.nnic	chr12	+	3301	5	NIC	ENSG00000198393.8	novel	834	5	NA	NA	-32	441	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	14.972892172189	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTTGGGTTTTTTTTTT	NA	False	NA	8	True	AATAAA	-18	NA	132986332	133012568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_132986874_132987664_132987769_133007041_133007169_133007436_133007533_133010135
transcript_37739.known	chr12	+	17697	4	FSM	ENSG00000198393.8	ENST00000328654.10	17697	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.6707311029399	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCACTGCTCTCTCATTAT	132985397	True	NA	NA	False	ATTAAA	-16	NA	132986366	133027102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_132986874_133007041_133007169_133007436_133007533_133010135
transcript_37741.nnic	chr12	+	677	6	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	-10	-2242	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	83.1567195120154	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTCAATGAATC	133037134	False	NA	NA	False	ATTAAA	-24	NA	133037468	133054760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133051658_133051709_133054638
transcript_37745.nnic	chr12	+	627	5	NNC	ENSG00000198040.11	novel	6811	5	NA	NA	-10	-2242	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	71.8831517116494	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTCAATGAATC	133037134	False	NA	NA	False	ATTAAA	-24	NA	133037468	133054760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133054638
transcript_37746.known	chr12	+	6811	5	FSM	ENSG00000198040.11	ENST00000539354.6	6811	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	41.2575750620416	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTCAAGTTGTGTTTG	133036504	True	NA	16	True	AATAAA	-18	NA	133037508	133063299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133056953
transcript_37748.nic	chr12	+	731	5	NIC	ENSG00000198040.11	novel	6811	5	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	76.9395054572097	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAAGTTGTGTTTGTTACA	133037134	False	NA	21	True	AATAAA	-23	NA	133037468	133063304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133037546_133041277_133041483_133047954_133048082_133048752_133048849_133063078
transcript_37750.known	chr12	+	3501	5	FSM	ENSG00000198040.11	ENST00000543758.5	3501	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	91.9955841331528	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTAGTGGTATTTGTGG	133037182	False	NA	16	True	AATAAA	-25	NA	133037300	133059606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133037546_133041099_133041483_133047954_133048082_133048752_133048849_133056956
transcript_37751.known	chr12	+	637	3	FSM	ENSG00000198040.11	ENST00000539686.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	89.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGCCACATCTTATACCA	133036520	True	NA	NA	False	NA	NA	NA	133037524	133048356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133037555_133041277_133041483_133047954
transcript_37752.known	chr12	+	562	4	FSM	ENSG00000198040.11	ENST00000543310.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	79.6087655698514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGTGAGTGTATGAGAAC	133038864	False	NA	NA	False	NA	NA	NA	133038874	133048844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133039013_133041277_133041483_133047954_133048082_133048752
transcript_37753.known	chr12	+	726	6	FSM	ENSG00000196387.10	ENST00000356456.9	726	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	49.6443350242503	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAGGAGGCTGGAAATGC	133080328	False	NA	NA	False	NA	NA	NA	133080473	133105626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133080552_133080821_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_37761.nic	chr12	+	2388	5	NIC	ENSG00000196387.10	novel	2328	6	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	38.9639256235816	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079451	True	NA	63	True	AATAAA	-20	NA	133080893	133107428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133081073_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_37766.known	chr12	+	553	4	FSM	ENSG00000196387.10	ENST00000412146.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	44.3946943776944	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGCAAGGATCATACTGAG	133079432	True	NA	NA	False	TTTAAA	-11	NA	133080874	133105641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133083102_133083230_133083465_133083562_133105509
transcript_37781.known	chr12	-	17294	2	FSM	ENSG00000214029.6	ENST00000537226.3	17294	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTTGACAAATATAAGC	-133129294	True	NA	-4	True	AATAAA	-17	NA	133130274	133104778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_133122025_133130226
transcript_37784.known	chr12	+	2349	5	FSM	ENSG00000196387.10	ENST00000355557.7	2349	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	30.6308667849932	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079480	True	NA	63	True	AATAAA	-20	NA	133080922	133107428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133105509
transcript_37785.known	chr12	+	2328	6	FSM	ENSG00000196387.10	ENST00000536790.5	2328	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	31.5556651015313	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGCTTGCTGATTTTT	133079568	False	NA	63	True	AATAAA	-20	NA	133081010	133107428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133081073_133081272_133081330_133083102_133083230_133083465_133083562_133100986_133101054_133105509
transcript_37786.known	chr12	-	2054	4	FSM	ENSG00000214029.6	ENST00000650709.1	2054	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTCCACATATTCCTGG	-133129293	True	NA	NA	False	AATAAA	-17	NA	133130273	133106829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_-_133106960_133120287_133122025_133128327_133128468_133130226
transcript_37789.known	chr12	+	3773	7	FSM	ENSG00000090612.22	ENST00000541009.6	3773	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	23.0753596336487	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACCTGTTATTATATCTT	133179279	True	NA	57	True	NA	NA	NA	133181558	133205173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_37792.nic	chr12	+	1048	7	NIC	ENSG00000090612.22	novel	3773	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	32.5751268437882	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATCTGGAAAAACCGTC	133179212	True	NA	2	True	AATAAA	-15	NA	133181491	133202440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133181628_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133193427_133193534_133202143
transcript_37794.nic	chr12	+	867	6	NIC	ENSG00000256223.6	novel	2169	5	NA	NA	-98	-351	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	9.47839648885823	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAATGATCTCTGGTATTTG	133130461	False	NA	NA	False	ATTAAA	-17	NA	133130476	133155598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37795.nic	chr12	+	2237	6	NIC	ENSG00000256223.6	novel	2169	5	NA	NA	-98	0	intron_retention	FALSE	canonical	3	22	junction_1	9.47839648885823	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	133130461	False	NA	-16	True	NA	NA	NA	133130476	133156968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr12_+_133130755_133130836_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37799.known	chr12	+	13390	6	FSM	ENSG00000090612.22	ENST00000536435.7	13390	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	31.237157361066	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTCACCAGGGTCAGCC	133179215	True	NA	NA	False	AATAAA	-19	NA	133181494	133214832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191488_133191616_133191907_133192004_133202143
transcript_37801.known	chr12	+	717	6	FSM	ENSG00000090612.22	ENST00000500625.7	717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.6008403287169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAATGCACTACATTTG	133179223	True	NA	NA	False	AATAAA	-27	NA	133181502	133202219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181628_133181945_133182031_133187864_133188073_133191488_133191616_133191907_133192004_133202143
transcript_37803.known	chr12	+	4406	5	FSM	ENSG00000256223.6	ENST00000248211.11	4406	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.9917745353087	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAGGAGATTTGTCAAAAT	133129690	True	NA	17	True	AATAAA	-26	NA	133130626	133159465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133130755_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37805.known	chr12	+	781	5	FSM	ENSG00000090612.22	ENST00000541211.6	781	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	29.2318319644869	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCTAATGGGTTTCAG	133179215	True	NA	-88	True	AATATA	-28	NA	133181494	133202350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133181687_133181945_133182031_133187871_133188073_133191907_133192004_133202143
transcript_37806.known	chr12	+	2169	5	FSM	ENSG00000256223.6	ENST00000426665.6	2169	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.17960354715414	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATATGGGAATTTTTCAC	133129690	True	NA	-16	True	NA	NA	NA	133130626	133156968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr12_+_133131015_133144433_133144526_133151027_133151155_133151808_133151905_133155502
transcript_37807.known	chr13	+	4239	14	FSM	ENSG00000196199.14	ENST00000361479.10	4239	14	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	15.0301472196312	827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTGTTTCCTTTTATATC	19628809	True	NA	7	True	AATAAA	-14	NA	19633658	19673441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19633962_19642114_19642271_19646442_19647292_19648421_19648522_19650002_19650261_19658994_19659121_19659200_19659290_19661697_19661839_19663039_19663127_19666424_19666580_19668376_19668532_19670235_19670364_19671205_19671290_19671833
transcript_37808.known	chr13	-	2013	10	FSM	ENSG00000121390.19	ENST00000619300.4	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	146.430449508324	235	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTTATTAGTGGTAT	-19776195	True	NA	-9	True	AATAAA	-21	NA	19783019	19702870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19703361_19705661_19705832_19709541_19709600_19730238_19730345_19741564_19741650_19751270_19751468_19759322_19759419_19772241_19772544_19782385_19782792_19782916
transcript_37814.known	chr13	-	3283	8	FSM	ENSG00000132950.19	ENST00000337963.9	3283	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	25.7705733149185	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAAGTGTTATGGGCTT	-19862204	True	NA	NA	False	ATTAAA	-21	NA	19863649	19823481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19825236_19835476_19835690_19837655_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_37828.known	chr13	-	1382	6	FSM	ENSG00000132950.19	ENST00000382905.8	1382	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	22.5530485744167	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_3783.known	chr1	+	1568	8	FSM	ENSG00000121766.16	ENST00000344147.10	1568	8	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	66.7006715995929	2468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGAGTTATTTTTCCT	31288442	True	NA	31	True	ACTAAA	-23	NA	31297031	31364936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_37837.known	chr13	-	1622	5	FSM	ENSG00000132950.19	ENST00000467542.5	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	23.2163735324878	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19838699_19838986_19851354_19852191_19862398_19862467_19863449
transcript_3784.known	chr1	+	1534	7	FSM	ENSG00000121766.16	ENST00000616393.4	1534	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	225.216500776968	998	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_37840.known	chr13	-	1092	5	FSM	ENSG00000132950.19	ENST00000382907.8	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	30.6349473640808	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGTTTCTATGGAATTG	-19862063	True	NA	-1	True	AATAAA	-29	NA	19863508	19837452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19851354_19851449_19851688_19852191_19862398_19862467_19863449
transcript_37847.nnic	chr13	-	1151	4	NIC	ENSG00000132950.19	novel	1382	6	NA	NA	2	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_3	38.9044413345772	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862202	True	NA	-13	True	AATAAA	-17	NA	19863647	19837464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_19837822_19851354_19851449_19851688_19852191_19863449
transcript_37848.known	chr13	-	1336	4	FSM	ENSG00000132950.19	ENST00000495534.1	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	33.5095342982992	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAAAGTACACATCTGTT	-19862079	True	NA	-13	True	AATAAA	-17	NA	19863524	19837464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_19837822_19851354_19852191_19862398_19862467_19863449
transcript_3785.known	chr1	+	1705	9	FSM	ENSG00000121766.16	ENST00000546109.5	1705	9	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	246.86927208545	1095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828_31348975_31364031
transcript_37853.known	chr13	+	5051	26	FSM	ENSG00000121741.17	ENST00000382871.3	5051	26	0	0	0	0	multi-exon	FALSE	canonical	2	91	junction_3	108.040333209408	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATATATGTATGTATGTGT	19951096	True	NA	12	True	AATAAA	-19	NA	19958782	20086746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19958842_19959957_19960027_19970024_19970072_19993062_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20026611_20026763_20027202_20027319_20031318_20031436_20034253_20034405_20036736_20036910_20051432_20051599_20052276_20052312_20058574_20058705_20059446_20059563_20061052_20061225_20062845_20062972_20064450_20064546_20066850_20067020_20067238_20067391_20082015_20082131_20082780_20083033_20083655_20083777_20085821
transcript_3786.known	chr1	+	1489	7	FSM	ENSG00000121766.16	ENST00000618216.4	1489	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	229.40460375115	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATAATCCTTCTTCCTGG	31288392	True	NA	48	True	ACTAAA	-40	NA	31296981	31364953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31364031
transcript_37864.nnic	chr13	+	1669	9	NNC	ENSG00000121741.17	novel	1912	8	NA	NA	4	2822	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_8	97.1824958518765	41	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCATTGTTTGAGTTTTAT	19950994	True	NA	3	True	AATAAA	-14	NA	19958680	20022785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546_20019619_20022679
transcript_37866.known	chr13	+	1912	8	FSM	ENSG00000121741.17	ENST00000382881.7	1912	8	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	41.9299707724629	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTTCTTTCAAAAAAATT	19950990	True	NA	NA	False	TATAAA	-42	NA	19958676	20019963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_19958842_19959957_19960027_19993062_19993565_19993825_19993920_20002849_20003136_20005073_20005240_20006373_20006587_20019546
transcript_3787.known	chr1	+	761	8	FSM	ENSG00000121766.16	ENST00000479629.5	761	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	258.776714089777	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAGGTGAATGCTACTTT	31288408	True	NA	NA	False	AAAAAG	-2	NA	31296997	31348968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31297076_31310043_31310165_31318166_31318237_31319108_31319167_31337174_31337276_31338956_31339049_31346639_31346741_31348828
transcript_37871.nnic	chr13	+	890	4	NNC	ENSG00000121741.17	novel	5051	26	NA	NA	4	-32481	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	124.922198009623	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGGCATCCT	19950994	True	NA	NA	False	NA	NA	NA	19958680	19970611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_19958842_19959957_19960027_19969830_19969904_19970024
transcript_37874.nic	chr13	+	821	3	ISM	ENSG00000121741.17	ENST00000382871.3	5051	26	-102	116131	4	-32477	5prime_fragment	FALSE	canonical	3	94	junction_2	85.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGGCATCCTCTCA	19950994	True	NA	NA	False	NA	NA	NA	19958680	19970615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_19958842_19959957_19960027_19970024
transcript_37876.nnic	chr13	+	786	3	NNC	ENSG00000121741.17	novel	5051	26	NA	NA	51	-32477	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_1	30.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGGCATCCTCTCA	19951147	True	NA	NA	False	NA	NA	NA	19958833	19970615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_19958960_19959957_19960027_19970024
transcript_37877.known	chr13	-	1483	8	FSM	ENSG00000165475.15	ENST00000298248.12	1483	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	5.69281681290608	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTTTCTCTTTTGGTTT	-20525728	True	NA	-1	True	AATAAA	-21	NA	20525857	20403668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20439592_20439755_20489369_20489497_20512442_20512551_20525753
transcript_37878.known	chr13	-	1331	7	FSM	ENSG00000165475.15	ENST00000644593.1	1331	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.1469484893415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCTCTTTTGGTTTTT	-20525736	True	NA	1	True	AATAAA	-23	NA	20525865	20403666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20404243_20404634_20404742_20413281_20413388_20432101_20432297_20489369_20489497_20512442_20512551_20525753
transcript_3788.known	chr1	-	535	3	FSM	ENSG00000121769.8	ENST00000497275.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_2	3	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTAACTGCACTCAT	-31369560	False	NA	-2	True	NA	NA	NA	31369590	31365712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31365940_31367392_31367495_31369384
transcript_37888.known	chr13	+	2850	26	FSM	ENSG00000032742.18	ENST00000351808.10	2850	26	0	0	0	0	multi-exon	TRUE	canonical	1	12	junction_25	12.3783035994437	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGTGTATGTAGTCA	20566336	True	NA	94	True	AATAAA	-21	NA	20567156	20691444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_20567257_20574379_20574476_20582956_20583020_20589810_20589868_20590966_20591021_20591617_20591682_20592334_20592405_20596149_20596241_20597014_20597120_20598650_20598754_20599450_20599566_20601704_20601934_20605034_20605106_20615792_20615880_20625749_20625850_20631015_20631103_20638331_20638519_20641289_20641399_20643454_20643606_20644842_20644959_20653875_20653929_20656364_20656431_20663497_20663605_20670972_20671040_20690704_20690816_20691053
transcript_3789.known	chr1	+	1900	10	FSM	ENSG00000168528.12	ENST00000373709.8	1900	10	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	22.5492602052145	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTGCCCCTCACCCT	31409890	True	NA	29	True	AATAAA	-20	NA	31413212	31434678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31413305_31423692_31423855_31424682_31424874_31425329_31425410_31425775_31425914_31426653_31426824_31428977_31429069_31429396_31429539_31432966_31433186_31434063
transcript_37899.nic	chr13	+	1456	3	ISM	ENSG00000032742.18	ENST00000351808.10	2850	26	-48	107276	-29	1152	5prime_fragment	FALSE	canonical	3	51	junction_2	5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCATTTGGATAGTAAGGA	20566288	True	NA	NA	False	NA	NA	NA	20567108	20584168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_20567257_20574379_20574476_20582956
transcript_37901.known	chr13	-	1054	5	FSM	ENSG00000150456.11	ENST00000382758.6	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	11.6833214455479	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGGTAGCATCCTAGG	-20773446	True	NA	NA	False	NA	NA	NA	20773961	20728730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773920
transcript_37902.nnic	chr13	-	879	4	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-108	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_2	31.8433666561813	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	-20774040	False	NA	-16	True	AATAAA	-15	NA	20774069	20728930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_20729217_20731840_20732122_20757454_20757618_20773920
transcript_37904.nnic	chr13	-	658	3	NIC	ENSG00000150456.11	novel	1054	5	NA	NA	-168	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_1	24	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	-20774100	False	NA	-16	True	AATAAA	-15	NA	20774129	20728930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_20729217_20757454_20757618_20773920
transcript_37906.known	chr13	-	875	5	FSM	ENSG00000150456.11	ENST00000382754.4	875	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	27.7533781727558	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTCCTTAGGGAGG	-20773403	True	NA	-16	True	AATAAA	-15	NA	20773918	20728930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20729217_20731840_20732122_20737722_20737806_20757454_20757618_20773856
transcript_37907.known	chr13	-	9921	23	FSM	ENSG00000132953.18	ENST00000255305.11	9857	23	-64	0	-63	0	multi-exon	TRUE	non_canonical	0	0	junction_3	35.1825522591962	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGAAAACAGATTTCAT	-20902033	False	NA	0	True	AATAAA	-22	NA	20902810	20777328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_20783920_20786964_20787058_20787480_20787599_20788485_20788617_20790461_20790581_20796075_20796257_20796763_20797058_20799164_20799340_20800155_20800326_20800830_20800991_20807456_20807635_20808435_20808582_20809082_20809226_20809790_20809968_20821703_20821879_20822131_20822290_20827066_20827180_20842894_20843049_20843769_20843887_20855626_20855766_20862716_20862859_20868595_20868702_20902669
transcript_37911.nic	chr13	-	1434	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	274	6157	-27	-6157	5prime_fragment	FALSE	canonical	3	22	junction_2	60.4777277644883	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAGAGAA	-20901997	False	NA	NA	False	NA	NA	NA	20902774	20861790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_37913.nic	chr13	-	735	4	ISM	ENSG00000132953.18	ENST00000490513.1	914	5	274	6856	-27	5923	5prime_fragment	FALSE	canonical	3	22	junction_2	60.4777277644883	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTTAAAAAGCTCTAGA	-20901997	False	NA	NA	False	AAAAAG	-5	NA	20902774	20862489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_20862859_20862968_20863124_20868595_20868702_20902669
transcript_37914.nic	chr13	-	1280	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	-28	84461	-27	-6156	5prime_fragment	FALSE	canonical	3	126	junction_1	14.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAGAGAGAAA	-20901997	False	NA	NA	False	NA	NA	NA	20902774	20861789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_37915.nic	chr13	-	584	3	ISM	ENSG00000132953.18	ENST00000255305.11	9857	23	-28	85157	-27	5927	5prime_fragment	FALSE	canonical	3	126	junction_1	14.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAAAGCTCTAGATGTT	-20901997	False	NA	NA	False	AAAAAG	-9	NA	20902774	20862485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_20862859_20868595_20868702_20902669
transcript_3792.known	chr1	-	865	5	FSM	ENSG00000162517.13	ENST00000489164.5	865	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	118.309974220266	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTACTGCCCACGCTCT	-31644569	False	NA	NA	False	NA	NA	NA	31644589	31630788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644379
transcript_3793.known	chr1	-	1614	5	FSM	ENSG00000162517.13	ENST00000373703.5	1614	5	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_4	36.0234298755685	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCCATGTTTTCCACCATG	-31640074	True	NA	-4	True	AATAAA	-17	NA	31644876	31629865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31635221_31635523_31644840
transcript_37947.known	chr13	+	405	3	FSM	ENSG00000150459.12	ENST00000492245.5	405	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1536	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATTGCCATTAAGCCT	21123055	True	NA	36	True	AATAAA	-20	NA	21140614	21147413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21140682_21140885_21140996_21147185
transcript_37948.known	chr13	+	670	3	FSM	ENSG00000150459.12	ENST00000467636.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1575	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGTGTGAAAGTTAATG	21140868	False	NA	18	True	AATATA	-14	NA	21140885	21147603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21140996_21146804_21146928_21147166
transcript_37951.known	chr13	-	2869	9	FSM	ENSG00000165480.16	ENST00000314759.6	2869	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_5	81.0169735302424	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165577	True	NA	-2	True	AATAAA	-19	NA	21176552	21153594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_37959.known	chr13	-	2803	8	FSM	ENSG00000165480.16	ENST00000298260.8	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_7	158.035903954688	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165573	True	NA	-2	True	AATAAA	-19	NA	21176548	21153594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21155692_21155812_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21176374
transcript_37961.known	chr13	-	2745	8	FSM	ENSG00000165480.16	ENST00000400018.7	2745	8	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	187.57996934097	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGGGTTTGGCAAAGTC	-21165572	True	NA	-2	True	AATAAA	-19	NA	21176547	21153594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21157921_21158126_21159901_21159988_21161789_21161876_21167987_21168400_21172338_21172505_21172619_21172682_21176374
transcript_3797.known	chr1	-	750	4	FSM	ENSG00000162517.13	ENST00000478502.5	750	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	112.221012094686	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAATAGTGAGGACCGG	-31640094	True	NA	NA	False	NA	NA	NA	31644896	31630448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31630843_31632494_31632639_31633158_31633315_31644840
transcript_37983.nic	chr13	-	1197	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-269	14283	-269	344	5prime_fragment	FALSE	canonical	3	552	junction_3	39.3022476032436	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCAGATATTTATTTAT	NA	False	NA	1	True	AATAAA	-28	NA	21176821	21167877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_37984.nic	chr13	-	759	4	ISM	ENSG00000165480.16	ENST00000314759.6	2869	9	-69	14521	-69	106	5prime_fragment	FALSE	canonical	3	552	junction_3	39.3022476032436	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGCACTAAAAATGGATGA	NA	False	NA	-13	True	AGTAAA	-20	NA	21176621	21168115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_21168400_21172338_21172505_21172619_21172682_21176374
transcript_37985.known	chr13	-	750	3	FSM	ENSG00000165480.16	ENST00000462482.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	209.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTTGCTGTTTGCAAAC	-21165576	True	NA	NA	False	NA	NA	NA	21176551	21154696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21155151_21155692_21155812_21176374
transcript_37995.known	chr13	+	2233	2	FSM	ENSG00000173141.5	ENST00000309594.5	2233	2	0	0	0	0	multi-exon	FALSE	canonical	3	1757	junction_1	0	3105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTTTCTAAATACAT	21154216	True	NA	6	True	AATAAA	-13	NA	21176657	21179084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21176718_21176911
transcript_37997.nnic	chr13	+	740	5	NNC	ENSG00000233325.4	novel	444	4	NA	NA	-8	86550	intron_retention	FALSE	canonical	0	0	junction_3	5.16599457994296	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCATGAGAATGTCATGGT	21297776	True	NA	NA	False	ATTAAA	-25	NA	21298124	21392923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_21298363_21301418_21301619_21351147_21351280_21391749_21391818_21392821
transcript_38.known	ERCC-00079	+	628	1	FSM	ERCC-00079A	DQ883652	628	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	744	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00079_+_0_600
transcript_38000.nnic	chr13	+	1078	4	NNC	ENSG00000233325.4	novel	444	4	NA	NA	-8	46855	intron_retention	FALSE	canonical	1	1	junction_2	5.43650214343336	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCATCTTAGCCAGTTT	21297776	True	NA	NA	False	AATAAA	-18	NA	21298124	21353228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_21298363_21301418_21301619_21351147_21351280_21352720
transcript_38003.known	chr13	+	347	3	FSM	ENSG00000233325.4	ENST00000424756.2	1310	3	0	963	0	-963	multi-exon	FALSE	canonical	1	1	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGGATCAAAAATATCTG	21297790	True	NA	NA	False	NA	NA	NA	21298138	21304555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21298197_21301418_21301619_21304466
transcript_38005.nnic	chr13	+	633	3	NNC	ENSG00000233325.4	novel	444	4	NA	NA	-8	371	intron_retention	FALSE	canonical	1	1	junction_2	6	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAAAGACTTTTTTT	21297776	True	NA	NA	False	ATTAAA	-22	NA	21298124	21302249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_21298363_21301418_21301619_21302054
transcript_38007.nnic	chr13	+	1490	3	NIC	ENSG00000233325.4	novel	1310	3	NA	NA	-8	0	intron_retention	FALSE	canonical	3	11	junction_2	1	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTGGTGATTTTATTTC	21297776	True	NA	NA	False	AATAAA	-15	NA	21298124	21305518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_21298363_21301418_21301619_21304466
transcript_38009.nnic	chr13	+	691	2	FSM	ENSG00000233325.4	ENST00000691775.1	690	2	-8	7	-8	-7	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGAATGAATGATTACTG	21297776	True	NA	NA	False	AATAAA	-17	NA	21298124	21301871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_21298363_21301418
transcript_38011.known	chr13	-	1885	12	FSM	ENSG00000165487.14	ENST00000382374.9	1885	12	0	0	0	0	multi-exon	TRUE	canonical	3	304	junction_5	22.3092464986795	329	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGAGGTGCTTTTTATTT	-21596643	True	NA	NA	False	AATAAA	-23	NA	21604170	21492690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21493354_21495160_21495319_21496051_21496161_21502925_21503098_21510003_21510102_21514352_21514419_21521244_21521328_21522602_21522651_21539301_21539378_21539656_21539689_21566796_21566945_21603938
transcript_38014.known	chr13	-	603	1	FSM	ENSG00000226525.5	ENST00000464254.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1385	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATATATTCACACACAT	NA	False	NA	NA	False	NA	NA	NA	21629015	21628412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_21628400_21629000
transcript_38018.known	chr13	+	1145	4	FSM	ENSG00000276476.4	ENST00000657205.1	1145	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATCAGCTCTGAGGCCTG	22040084	True	NA	NA	False	AATAAA	-12	NA	22040971	22275093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_22041385_22183932_22184001_22264309_22264403_22274522
transcript_3802.known	chr1	+	480	2	FSM	ENSG00000264078.1	ENST00000581333.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAGACCAGCCTAACCAACA	31644677	True	NA	NA	False	NA	NA	NA	31644693	31649371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_31644847_31649044
transcript_38020.known	chr13	-	2042	5	FSM	ENSG00000262619.3	ENST00000577004.2	2042	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	0.82915619758885	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTAATGGACTCACTG	NA	False	NA	NA	False	AATAAA	-36	NA	22916369	22872636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_22873275_22876297_22876475_22894605_22895039_22896360_22896503_22915717
transcript_38022.known	chr13	-	3954	11	FSM	ENSG00000151835.17	ENST00000683489.1	3954	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	17.4527934726794	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCACATTTTATTGCTT	-23432048	True	NA	-106	True	NA	NA	NA	23433752	23328928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23329953_23341584_23341691_23353784_23353877_23354518_23356008_23358334_23358482_23365165_23365278_23368401_23368488_23371077_23371166_23375118_23375270_23411219_23411741_23433614
transcript_38027.known	chr13	-	2500	2	FSM	ENSG00000151835.17	ENST00000683638.1	2500	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAACACCATGTTTAAAAA	-23432059	True	NA	NA	False	NA	NA	NA	23433763	23409389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23411741_23433614
transcript_3803.known	chr1	-	2472	15	FSM	ENSG00000134668.13	ENST00000257100.7	2472	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	2.61080955464244	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATCTGCTAGCTGGTCA	-31815892	True	NA	-3	True	AATAAA	-20	NA	31816022	31790421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_31791253_31792214_31792402_31792677_31792768_31793277_31793429_31793746_31793898_31794123_31794236_31796589_31796716_31798206_31798324_31798441_31798602_31799400_31799486_31799808_31799864_31800015_31800142_31800440_31800618_31801663_31801706_31815960
transcript_38032.known	chr13	-	2381	19	FSM	ENSG00000027001.10	ENST00000382172.4	2381	19	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_12	34.9320769494171	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTTTCACCTGTTT	-23886150	True	NA	-12	True	AATAAA	-17	NA	23889400	23730188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_23730446_23756544_23756619_23760095_23760218_23805949_23806070_23809849_23809925_23836239_23836350_23837551_23837757_23839648_23839727_23841334_23841489_23858859_23858913_23862301_23862363_23864140_23864190_23869291_23869449_23870012_23870196_23874845_23874910_23879267_23879355_23881698_23881788_23886332_23886507_23889131
transcript_38039.nnic	chr13	-	724	3	NNC	ENSG00000027001.10	novel	2381	19	NA	NA	-83	-4011	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	126.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGTAAAGACTTTTTTT	NA	False	NA	NA	False	ATTAAA	-22	NA	23889483	23885709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_23885908_23886332_23886507_23889131
transcript_38041.known	chr13	+	852	4	FSM	ENSG00000205861.13	ENST00000382133.9	852	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1.69967317119759	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGTGAACAACTTTGG	23888697	True	NA	8	True	AATAAA	-20	NA	23888841	23892104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_23889012_23889999_23890043_23891384_23891532_23891612
transcript_38052.nic	chr13	-	615	4	ISM	ENSG00000102699.6	ENST00000381989.4	5437	34	-51	79296	-51	-43830	5prime_fragment	FALSE	canonical	3	231	junction_1	11.7284080571728	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTTTCTTATTTTAATT	-24507417	True	NA	NA	False	ATTAAA	-13	NA	24512829	24500226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_24500383_24501632_24501835_24503644_24503778_24512705
transcript_38055.known	chr13	-	5437	34	FSM	ENSG00000102699.6	ENST00000381989.4	5437	34	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_29	24.782061998104	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTTTTCTGTGTCTCA	-24507366	True	NA	-4	True	AATAAA	-16	NA	24512778	24420930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24421315_24426465_24426599_24431376_24431477_24434394_24435475_24441845_24441969_24442589_24442686_24443649_24443731_24446680_24446762_24447015_24447187_24449717_24449818_24452405_24452594_24453586_24453655_24455016_24455213_24456340_24456479_24459043_24459123_24459263_24459311_24459971_24460137_24469023_24469111_24469893_24470026_24475471_24475597_24477700_24477858_24478092_24478277_24484652_24484749_24486167_24486306_24490667_24490829_24492420_24492595_24493595_24493734_24494572_24494723_24498115_24498230_24499300_24499377_24500315_24500383_24501632_24501835_24503644_24503778_24512705
transcript_38058.known	chr13	-	1126	2	FSM	ENSG00000287376.1	ENST00000657093.1	1126	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGCTGTGGATGCCA	-24541700	False	NA	0	True	TATAAA	-19	NA	24541720	24539138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24540028_24541483
transcript_38060.known	chr13	-	5082	17	FSM	ENSG00000151849.16	ENST00000381884.9	5082	17	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_9	27.9617484253042	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGTACAGATGTATCTA	-24917537	True	NA	NA	False	AATAAA	-14	NA	24922861	24882278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24889315_24889401_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_38061.known	chr13	-	5020	16	FSM	ENSG00000151849.16	ENST00000616936.4	5020	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	51.4932573795401	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAATATAAGTACAGATGT	-24917565	True	NA	NA	False	AATAAA	-9	NA	24922889	24882283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24883370_24883962_24884084_24884160_24884246_24884322_24884464_24885275_24885387_24885605_24885671_24892642_24892868_24899418_24899585_24903925_24904059_24905345_24906961_24907090_24907194_24908017_24908127_24909789_24910087_24911945_24912070_24912581_24913092_24922760
transcript_38065.nnic	chr13	-	628	2	NNC	ENSG00000151849.16	novel	5082	17	NA	NA	-31	-32907	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCATTTGATGAGTTTGAC	NA	False	NA	-1	True	AATAAA	-22	NA	24922920	24922076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_24922545_24922760
transcript_38070.known	chr13	-	514	6	FSM	ENSG00000253771.7	ENST00000434100.5	514	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.72046505340853	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTTAGTCTAATTTTTC	-24967985	False	NA	NA	False	ATTAAA	-14	NA	24968277	24924676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24924876_24925847_24925895_24933494_24933537_24951396_24951489_24967391_24967454_24968205
transcript_38078.nic	chr13	-	854	5	NIC	ENSG00000253771.7	novel	3022	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	4.49305018890286	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGATCTTTGACA	-24968216	True	NA	2	True	AGTAAA	-20	NA	24968508	24941801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_24942109_24942931_24943022_24951396_24951489_24967391_24967454_24968205
transcript_38079.nnic	chr13	-	683	4	FSM	ENSG00000253771.7	ENST00000692136.1	641	4	-45	3	-45	0	multi-exon	FALSE	canonical	2	6	junction_1	5.65685424949238	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGTTAGTCTAATTTTTC	NA	False	NA	NA	False	ATTAAA	-14	NA	24968550	24924676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24924876_24925847_24925895_24951396_24951489_24968205
transcript_38080.nic	chr13	-	834	4	FSM	ENSG00000253771.7	ENST00000687945.1	768	4	-66	0	-45	0	multi-exon	FALSE	canonical	3	9	junction_2	3.68178700572909	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGATCTTTGACA	NA	False	NA	2	True	AGTAAA	-20	NA	24968550	24941801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24942109_24942931_24943022_24951396_24951489_24968205
transcript_38086.known	chr13	-	349	1	FSM	ENSG00000232858.1	ENST00000428810.1	349	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATTAAAAAAACGAAACTTT	NA	False	NA	NA	False	NA	NA	NA	24988925	24988576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_24988600_24988900
transcript_38087.known	chr13	-	5117	14	FSM	ENSG00000139505.12	ENST00000381801.6	5117	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_7	10.9997310349043	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTTCTAGGAAAGTAAA	-25285554	True	NA	1	True	AATAAA	-20	NA	25287488	25246221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_25249493_25251648_25251776_25251852_25251985_25253763_25253965_25254384_25254435_25257195_25257322_25257735_25257846_25258559_25258693_25261667_25261803_25265818_25265948_25266128_25266287_25267778_25267942_25274070_25274188_25287223
transcript_38090.known	chr13	+	4236	16	FSM	ENSG00000139496.16	ENST00000381736.8	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_2	24.8080632053371	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGTGTCAGTAGCTGTT	25296302	True	NA	14	True	AATAAA	-29	NA	25301624	25342421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_25301881_25307805_25307949_25309246_25309283_25312882_25313033_25313613_25313752_25315356_25315468_25319325_25319351_25320529_25320596_25320918_25321094_25324988_25325069_25326915_25327035_25327429_25327513_25331356_25331559_25336935_25337035_25338635_25338732_25339964
transcript_38092.nic	chr13	+	533	3	ISM	ENSG00000139496.16	ENST00000481980.1	605	4	11	4711	11	-4711	5prime_fragment	TRUE	canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACCATAGTCTGCAAGG	25296244	True	NA	NA	False	AAAAAG	-9	NA	25301566	25303238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_25301881_25302926_25303009_25303101
transcript_38094.nic	chr13	+	476	2	ISM	ENSG00000139496.16	ENST00000490231.5	563	5	-83	9718	-14	-4711	5prime_fragment	FALSE	canonical	1	1	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACCATAGTCTGCAAGG	25296219	True	NA	NA	False	AAAAAG	-9	NA	25301541	25303238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_25301881_25303101
transcript_38095.known	chr13	-	357	1	FSM	ENSG00000234152.1	ENST00000447693.1	357	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGCCCGAGTTCCCCCCA	NA	False	NA	NA	False	AATGAA	-16	NA	25366155	25365798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_25365800_25366200
transcript_38098.nnic	chr13	+	910	3	NNC	ENSG00000132932.19	novel	7867	2	NA	NA	-32508	85	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	10.5	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAACATCAGTACTAGTT	NA	False	NA	17	True	ATTAAA	-21	NA	25977462	26020291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_25977877_26012530_26012623_26019887
transcript_38105.known	chr13	-	1105	6	FSM	ENSG00000127870.17	ENST00000468480.5	1105	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41.6624531202857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGGAAAGTGTATGGCAGT	-26220619	True	NA	NA	False	ATTAAA	-21	NA	26222261	26132114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26132452_26215473_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_38109.known	chr13	-	3398	5	FSM	ENSG00000127870.17	ENST00000381570.7	3398	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	43.6692111217961	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-26220061	False	NA	-21	True	AATAAA	-13	NA	26221703	26212774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221513
transcript_3811.known	chr1	+	2713	9	FSM	ENSG00000121774.18	ENST00000327300.12	2713	9	0	0	0	0	multi-exon	FALSE	canonical	3	1557	junction_1	186.944510483726	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAATGTGATGAATTGTCA	32001078	True	NA	NA	False	AATAAA	-23	NA	32013867	32043877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32014378_32030297_32030423_32031523_32031641_32033187_32033335_32036909_32037044_32037834_32038037_32038551_32038620_32039514_32039574_32042526
transcript_38110.known	chr13	-	3282	5	FSM	ENSG00000127870.17	ENST00000346166.7	3282	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	27.4362898366379	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTTTTTCTGTTGTTCC	-26220200	False	NA	-8	True	AATAAA	-26	NA	26221842	26212761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26221781
transcript_38111.known	chr13	-	3520	5	FSM	ENSG00000127870.17	ENST00000381588.9	3520	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	23.636571240347	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTATGTGAACTATGTT	-26220672	True	NA	-21	True	AATAAA	-13	NA	26222314	26212774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_26215593_26218510_26218607_26219456_26219668_26221247_26221331_26222002
transcript_38112.known	chr13	+	464	1	FSM	ENSG00000277368.1	ENST00000621997.1	464	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTCTATCTCTATTTG	26222065	False	NA	NA	False	AATAAA	-15	NA	26222190	26222654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_26222200_26222700
transcript_38114.known	chr13	-	349	2	FSM	ENSG00000152484.14	ENST00000620323.1	349	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGGGCTAATTATTTT	-27171689	False	NA	-3	True	ATTAAA	-29	NA	27171701	27170090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27170330_27171591
transcript_3812.known	chr1	+	1778	9	FSM	ENSG00000121775.18	ENST00000336294.10	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	42.1453956559907	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	32069447	True	NA	80	True	AAAAAG	-21	NA	32072938	32102863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32076762_32076847_32077163_32077319_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_38123.known	chr13	+	681	6	FSM	ENSG00000122026.11	ENST00000461690.5	681	6	0	0	0	0	multi-exon	FALSE	canonical	2	46	junction_4	7880.56471072981	2254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAAGGACATGAGGTAGCT	27251342	False	NA	76	True	NA	NA	NA	27251560	27256691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251586_27253764_27253844_27254219_27254282_27255241_27255350_27256183_27256335_27256435
transcript_38128.known	chr13	+	806	6	FSM	ENSG00000122026.11	ENST00000319826.8	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	8097.27432164676	3081	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244316	True	NA	0	True	AATAAA	-21	NA	27251582	27256568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251851_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_38151.known	chr13	+	616	6	FSM	ENSG00000122026.11	ENST00000272274.8	616	6	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_1	7965.98944011351	7664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244312	True	NA	0	True	AATAAA	-21	NA	27251578	27256568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251657_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_38152.known	chr13	+	641	6	FSM	ENSG00000122026.11	ENST00000326092.8	641	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	8057.76806317978	4340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	27244330	True	NA	0	True	AATAAA	-21	NA	27251596	27256568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27251700_27253764_27253844_27254219_27254282_27255241_27255355_27256183_27256335_27256435
transcript_38153.known	chr13	+	453	4	FSM	ENSG00000122026.11	ENST00000483765.5	453	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	9450.37157411754	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACCTCTGGGCTACAA	27253752	False	NA	-23	True	NA	NA	NA	27253764	27256545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27253844_27255241_27255355_27256183_27256335_27256435
transcript_38154.known	chr13	+	675	3	FSM	ENSG00000122026.11	ENST00000485756.1	675	3	0	0	0	0	multi-exon	FALSE	canonical	3	20159	junction_2	174	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACCTCTGGGCTACAAAAA	27254886	False	NA	-20	True	AATAAA	-1	NA	27254943	27256548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27255355_27256183_27256335_27256435
transcript_38155.known	chr13	+	2542	4	FSM	ENSG00000122035.7	ENST00000241463.5	2542	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCACATTCTCCTTGTT	27270634	True	NA	NA	False	AATAAA	-31	NA	27270829	27275192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27271069_27271483_27271541_27271638_27271719_27273026
transcript_38157.known	chr13	+	415	4	FSM	ENSG00000122035.7	ENST00000475647.1	415	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTCCTTGAAATTTCC	27271123	True	NA	NA	False	NA	NA	NA	27271176	27273276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27271205_27271483_27271541_27271638_27271719_27273026
transcript_38160.known	chr13	+	1443	9	FSM	ENSG00000122034.17	ENST00000381140.10	1443	9	0	0	0	0	multi-exon	FALSE	canonical	3	904	junction_2	90.0387937224839	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGTGGCCTAGATGAG	27414172	True	NA	5	True	ATTAAA	-17	NA	27424618	27435823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27432730_27432805_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_38163.known	chr13	+	1191	8	FSM	ENSG00000122034.17	ENST00000419181.5	1191	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	324.158565381518	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATTCCTTATCATTT	27414215	True	NA	12	True	ATTAAA	-16	NA	27424661	27435688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27424939_27427091_27427193_27429869_27429967_27430532_27430622_27434138_27434220_27434804_27435035_27435132_27435193_27435432
transcript_38165.known	chr13	-	1104	7	FSM	ENSG00000122033.15	ENST00000381116.5	1104	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	273.628346890855	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27441016_27441078_27445087_27445138_27449851_27449919_27450508
transcript_3818.known	chr1	+	1538	7	FSM	ENSG00000121775.18	ENST00000441402.5	1538	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	29.3806436658937	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTCCTGTGGTTCTT	32069451	True	NA	83	True	AAAAAG	-24	NA	32072942	32102866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32073052_32074950_32075078_32075602_32075823_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_38193.known	chr13	-	947	5	FSM	ENSG00000122033.15	ENST00000461838.5	947	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	249.78090399388	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCAGTAATTTTAATAAAG	-27450121	False	NA	-47	True	NA	NA	NA	27450131	27435683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445138_27450063
transcript_38194.nic	chr13	-	1362	5	NIC	ENSG00000122033.15	novel	995	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	240.292009854677	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450141
transcript_38198.known	chr13	-	682	5	FSM	ENSG00000122033.15	ENST00000485959.5	682	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	286.525304292658	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCTGAGAAAGGAACTGAT	-27450133	False	3478	NA	False	NA	NA	NA	27450143	27437268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27449851_27449919_27450063
transcript_38207.known	chr13	-	760	4	FSM	ENSG00000122033.15	ENST00000493719.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	241.836032606117	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGTAGACGTGTCAGAA	-27450154	False	3478	NA	False	CATAAA	-9	NA	27450164	27437144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27450063
transcript_38215.known	chr13	-	995	5	FSM	ENSG00000122033.15	ENST00000381120.8	995	5	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_4	47.91137651957	3583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCTCCTTGGTCTGCAG	-27447086	True	NA	-6	True	AATAAA	-23	NA	27450564	27435642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988_27440450_27445087_27445157_27450508
transcript_38216.known	chr13	-	889	3	FSM	ENSG00000122033.15	ENST00000405591.3	889	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	25.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAAGCTCGCTCCTTGG	-27440388	False	NA	-13	True	AATAAA	-16	NA	27440475	27435649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27435894_27437115_27437274_27439988
transcript_38217.known	chr13	-	373	3	FSM	ENSG00000122033.15	ENST00000484342.2	373	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	261	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTCAGCGAGTTATTCA	-27447109	True	NA	NA	False	AATAAA	-28	NA	27450587	27440205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27440450_27445087_27445138_27450508
transcript_38218.known	chr13	-	798	5	FSM	ENSG00000122033.15	ENST00000485650.5	798	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	245.353826136867	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAAAAAATGTAGACGTGT	-27447113	True	NA	NA	False	CATAAA	-4	NA	27450591	27437149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27441016_27441078_27445087_27445157_27450508
transcript_38219.known	chr13	-	296	3	FSM	ENSG00000122033.15	ENST00000464753.1	296	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	266.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCGCTGAAGACACCCAGAA	-27450189	False	NA	NA	False	NA	NA	NA	27450199	27440280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27440450_27445087_27445157_27450141
transcript_38220.known	chr13	-	877	4	FSM	ENSG00000122033.15	ENST00000471771.5	877	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	267.762747388222	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGTAAGTAAAGAAGGTACAA	-27450031	False	NA	NA	False	CATAAA	-37	NA	27450041	27437116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_27437274_27439988_27440450_27445087_27445157_27449851
transcript_38222.known	chr13	+	2118	4	FSM	ENSG00000186184.20	ENST00000465887.2	2118	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.456282095893	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	27607299	True	NA	8	True	AATAAA	-14	NA	27621891	27667410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648454_27650041_27650242_27665685
transcript_38225.known	chr13	+	4592	4	FSM	ENSG00000186184.20	ENST00000636817.1	4592	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	136.707311029399	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTGCAGAACTGTGGGCC	27607282	True	NA	NA	False	NA	NA	NA	27621874	27744237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648454_27738706_27738768_27739916
transcript_38227.known	chr13	+	1606	3	FSM	ENSG00000186184.20	ENST00000621089.2	1606	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	127.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGCCCTTTCTACATGCT	27620913	False	NA	NA	False	NA	NA	NA	27620946	27667022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27621141_27648378_27648454_27665685
transcript_38229.known	chr13	+	1723	3	FSM	ENSG00000186184.20	ENST00000489647.4	1723	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	135.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGTCAACCTGTATCTA	27607277	True	NA	NA	False	AATGAA	-10	NA	27621869	27651549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648454_27650041
transcript_38230.known	chr13	+	1931	3	FSM	ENSG00000186184.20	ENST00000630983.1	1931	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	140.5	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTGTATGCATTCTGTA	27607282	True	NA	8	True	AATAAA	-14	NA	27621874	27667410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27648378_27648450_27665685
transcript_38234.known	chr13	+	693	2	FSM	ENSG00000186184.20	ENST00000302979.5	693	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	7564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGTTTGACTGGTTTCTGT	27607299	True	NA	19	True	AATAAA	-19	NA	27621891	27623449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27622874
transcript_38235.known	chr13	+	668	2	FSM	ENSG00000186184.20	ENST00000399696.3	668	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGACTGGTTTCTGTTCC	27607361	False	NA	22	True	AATAAA	-22	NA	27621953	27623452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_27622010_27622840
transcript_38244.known	chr13	+	1428	7	FSM	ENSG00000132963.8	ENST00000460403.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4079.66185962622	3288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTTGATTAGATAAATT	28598574	True	NA	NA	False	ATTAAA	-31	NA	28659103	28678925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_28659188_28659821_28659920_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_3825.nnic	chr1	+	1361	6	NIC	ENSG00000121775.18	novel	1778	9	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_2	45.061735430407	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGCCTGTGTCCTGTGGTT	32069405	True	NA	80	True	AAAAAG	-21	NA	32072896	32102863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32073052_32074950_32075078_32091674_32092012_32094783_32094972_32100441_32100563_32102430
transcript_38255.known	chr13	+	1338	6	FSM	ENSG00000132963.8	ENST00000380842.5	1338	6	0	0	0	0	multi-exon	FALSE	canonical	3	7534	junction_1	629.289249868453	37231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGCAATGTCTAGAGACT	28598600	True	NA	NA	False	GATAAA	-17	NA	28659129	28678959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_28659188_28662409_28662508_28664508_28664570_28668472_28668575_28672338_28672433_28678034
transcript_38257.known	chr13	-	2133	2	FSM	ENSG00000139508.15	ENST00000475385.1	2133	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTTTACTTGTAAAA	NA	False	NA	NA	False	AATAAA	-33	NA	28704557	28700063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_28701582_28703942
transcript_38259.known	chr13	-	4317	5	FSM	ENSG00000122042.10	ENST00000380680.5	4317	5	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	11.8953772533703	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGTGTATTTGCCTATT	-29849452	True	NA	-2	True	TTTAAA	-18	NA	29850617	29764370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_29767308_29767617_29767696_29772111_29772199_29777154_29777264_29849511
transcript_38263.known	chr13	-	1634	11	FSM	ENSG00000102781.14	ENST00000380617.7	1634	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	6.34350061086148	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTAAAAAACAAGTTT	-30306731	False	NA	-28	True	GATAAA	-19	NA	30307026	30208479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30208739_30210315_30210443_30227411_30227547_30230467_30230595_30231313_30231473_30240459_30240566_30240958_30241087_30255446_30255616_30280062_30280224_30283615_30283792_30306939
transcript_38273.known	chr13	-	2319	5	FSM	ENSG00000189403.15	ENST00000339872.8	2319	5	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	5491.0238742424	6358	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTAGTTAAATGGCTTTCA	-30385378	False	NA	-31	True	AATAAA	-24	NA	30464310	30459849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_30461534_30462537_30462713_30463206_30463353_30463530_30463695_30464160
transcript_3829.known	chr1	+	3941	14	FSM	ENSG00000025800.14	ENST00000471599.5	3941	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	72.7619934602378	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	32099204	True	NA	18	True	ATTAAA	-21	NA	32108057	32173173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32108135_32154587_32154722_32156852_32156928_32157345_32157446_32158266_32158362_32159399_32159532_32160618_32160704_32161946_32162047_32162360_32162525_32163234_32163314_32166104_32166231_32167168_32167297_32169881_32170061_32170706
transcript_38294.known	chr13	+	4894	9	FSM	ENSG00000132952.12	ENST00000255304.9	4894	9	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17.900768139943	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACCTGTTTTTGTGATGA	30615712	True	NA	NA	False	AATAAA	-28	NA	30617919	30660766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30618057_30621072_30621240_30621763_30621893_30630834_30631475_30637743_30637858_30642627_30642758_30646931_30647058_30653147_30653306_30657473
transcript_38306.nnic	chr13	+	821	5	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	63.3615616916124	619	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863304	30883395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_30863579_30875273_30875367_30881952_30882005_30882559_30882660_30883093
transcript_38313.nnic	chr13	+	769	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-64	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_2	65.2805909559308	553	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863304	30883395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_30863579_30875273_30875367_30882559_30882660_30883093
transcript_38316.nnic	chr13	+	727	4	NNC	ENSG00000236094.3	novel	641	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	71.2008114810186	1060	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863305	30883395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_30863579_30881952_30882005_30882559_30882660_30883093
transcript_38323.nnic	chr13	+	673	3	FSM	ENSG00000236094.3	ENST00000690833.1	641	3	-61	29	-61	0	multi-exon	FALSE	canonical	3	73	junction_1	49.5	1658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	NA	False	NA	9	True	AATAAA	-18	NA	30863307	30883395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30863579_30882559_30882660_30883093
transcript_38328.known	chr13	+	411	2	FSM	ENSG00000236094.3	ENST00000440633.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCAATACATTTGCGTA	30882535	True	NA	9	True	AATAAA	-18	NA	30882550	30883395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_30882660_30883093
transcript_38334.known	chr13	-	5244	18	FSM	ENSG00000120694.20	ENST00000320027.10	5244	18	0	0	0	0	multi-exon	TRUE	canonical	3	768	junction_12	92.9664894792202	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAATTTTGAGTCTACTT	-31145409	True	NA	NA	False	NA	NA	NA	31161904	31134972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_38335.known	chr13	-	3570	18	FSM	ENSG00000120694.20	ENST00000630972.2	3570	18	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_17	226.783511847036	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	NA	False	NA	-5	True	AATAAA	-27	NA	31162388	31136624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161981
transcript_3834.known	chr1	+	4865	11	FSM	ENSG00000084652.16	ENST00000373610.8	4865	11	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	28.9117623122493	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTCTCCTGACCTG	32168226	True	NA	9	True	AATAAA	-16	NA	32179674	32198285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32179777_32180313_32180515_32181241_32181578_32184524_32184617_32187953_32188125_32190054_32190250_32192310_32192431_32192656_32192732_32193207_32193301_32194064_32194161_32194901
transcript_38344.known	chr13	-	3488	17	FSM	ENSG00000120694.20	ENST00000602786.5	3488	17	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_14	242.222392647748	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	-31145432	True	NA	-8	True	AATAAA	-24	NA	31161927	31136627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31155514_31155655_31158805_31158864_31161475
transcript_38345.known	chr13	-	3480	17	FSM	ENSG00000120694.20	ENST00000380405.7	3480	17	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	233.381854144126	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTTGATTTTGTCACT	-31145432	True	NA	-8	True	AATAAA	-24	NA	31161927	31136627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137525_31138406_31138569_31138780_31138901_31138999_31139108_31140183_31140310_31141121_31141260_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_38352.nic	chr13	-	2323	14	ISM	ENSG00000120694.20	ENST00000320027.10	5244	18	-110	5300	25	-1734	5prime_fragment	FALSE	canonical	3	768	junction_8	96.9751386428135	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATGATGCTAAAAATGCA	-31145519	True	NA	NA	False	GATAAA	-14	NA	31162014	31140272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_31140310_31141121_31141260_31143791_31143924_31145562_31145769_31147958_31148093_31148373_31148481_31149953_31150183_31150946_31151192_31151608_31151743_31152851_31152952_31154632_31154756_31155513_31155655_31158805_31158864_31161475
transcript_38358.known	chr13	-	812	3	FSM	ENSG00000120694.20	ENST00000435381.5	812	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	469	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTGATTTTGTCACTAAT	-31138540	False	NA	-5	True	AATAAA	-27	NA	31138568	31136624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_31137118_31137367_31137525_31138406
transcript_38360.known	chr13	-	1115	4	FSM	ENSG00000237637.1	ENST00000428419.1	1115	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-32031629	False	NA	NA	False	NA	NA	NA	32031639	32025313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32026097_32027202_32027254_32027574_32027667_32031450
transcript_38361.known	chr13	+	11854	27	FSM	ENSG00000139618.17	ENST00000544455.6	11854	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.4404498672439	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTTCCTTCCATAACTC	32314970	True	NA	5	True	AATAAA	-17	NA	32315085	32400268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_32315146_32316421_32316528_32319076_32319326_32325075_32325185_32326100_32326151_32326241_32326283_32326498_32326614_32329442_32329493_32330918_32331031_32332271_32333388_32336264_32341197_32344557_32344654_32346826_32346897_32354860_32355289_32356427_32356610_32357741_32357930_32362522_32362694_32363178_32363534_32370401_32370558_32370955_32371101_32376669_32376792_32379316_32379516_32379749_32379914_32380006_32380146_32394688_32394934_32396897_32397045_32398161
transcript_38367.nnic	chr13	-	667	4	NNC	ENSG00000189167.12	novel	1584	6	NA	NA	-446	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.49443825784929	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGAAGCCACATTAATTG	-32315771	True	NA	-1	True	AATAAA	-21	NA	32315809	32303698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_32304023_32308685_32308761_32310638_32310732_32315634
transcript_38378.known	chr13	-	5649	7	FSM	ENSG00000244754.9	ENST00000674349.1	5649	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	91.6333272705224	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTTAAGAGGATATGAAAT	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32514019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617_32538685_32538777
transcript_38380.known	chr13	-	2607	7	FSM	ENSG00000244754.9	ENST00000674196.1	2607	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	118.171368030595	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGAATATCTTCTAGT	-32532846	True	NA	NA	False	TATAAA	-44	NA	32538819	32517005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527457_32527533_32535768_32537028_32538617_32538685_32538777
transcript_38385.known	chr13	-	2053	6	FSM	ENSG00000244754.9	ENST00000674484.1	2053	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	77.6468930479514	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-32532829	True	NA	-11	True	AATAAA	-17	NA	32538802	32517620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538682
transcript_38386.known	chr13	-	2703	6	FSM	ENSG00000244754.9	ENST00000674421.1	2703	6	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	104.893088428171	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-32532826	True	NA	-7	True	ATTAAA	-10	NA	32538799	32516900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538749
transcript_38387.known	chr13	-	2701	6	FSM	ENSG00000244754.9	ENST00000674465.1	2701	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	100.536560514074	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATTCATTTCAGAGGTCT	-32532852	True	NA	-7	True	ATTAAA	-10	NA	32538825	32516900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538777
transcript_3840.known	chr1	+	2012	5	FSM	ENSG00000160051.12	ENST00000291358.11	2012	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	6.18465843842649	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGAGTCTGGCTGCTTTC	32204898	True	NA	7	True	AATAAA	-14	NA	32205670	32208682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32205724_32206153_32206298_32206508_32206762_32207001_32207121_32207239
transcript_38404.known	chr13	-	1566	5	FSM	ENSG00000244754.9	ENST00000674180.1	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	107.894624518555	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGGAATTCATTTCAG	-32532822	True	NA	-13	True	ATTAAA	-4	NA	32538795	32516906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538617
transcript_38405.known	chr13	-	1498	5	FSM	ENSG00000244754.9	ENST00000674297.1	1498	5	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_4	110.903956196341	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGATGGAATTCATTTCAG	-32532819	True	NA	-13	True	ATTAAA	-4	NA	32538792	32516906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32538682
transcript_38407.nic	chr13	-	746	5	NIC	ENSG00000244754.9	novel	2053	6	NA	NA	-2	0	intron_retention	FALSE	canonical	2	6	junction_4	129.713145054771	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAATGTTTTTATATTC	-32532831	True	NA	-11	True	AATAAA	-17	NA	32538804	32517620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_32518004_32521372_32521450_32522181_32522271_32527457_32527533_32538682
transcript_3841.known	chr1	+	2089	4	FSM	ENSG00000160051.12	ENST00000617816.1	2089	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.09901951359278	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCAAGATGATGCCACTGC	32204898	True	NA	NA	False	NA	NA	NA	32205670	32208548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32205724_32206153_32206762_32207001_32207121_32207239
transcript_38421.known	chr13	-	816	3	FSM	ENSG00000244754.9	ENST00000511143.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATTGAACAGTTTTTTA	-32532819	True	NA	NA	False	TTTAAA	-22	NA	32538792	32517487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32527407_32527533_32538617
transcript_38422.known	chr13	-	1227	3	FSM	ENSG00000244754.9	ENST00000674437.1	1227	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGCAAATTATATTTCTCT	-32532779	True	NA	-78	True	NA	NA	NA	32538752	32516971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32527407_32527533_32538682
transcript_38425.known	chr13	-	2454	3	FSM	ENSG00000244754.9	ENST00000674377.1	2454	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	35	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTAGATGTGTTTCTTCA	-32532842	True	NA	-48	True	NA	NA	NA	32538815	32516941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32535768_32537028_32538682
transcript_38427.known	chr13	-	2055	3	FSM	ENSG00000244754.9	ENST00000674494.1	2055	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	103.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTTGGGGACTTTAAAAAAA	-32532842	True	NA	NA	False	NA	NA	NA	32538815	32526869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32535768_32537028_32538682
transcript_38429.known	chr13	-	1919	3	FSM	ENSG00000244754.9	ENST00000512755.2	1919	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCTGTTTATCATTAATA	-32532853	True	NA	NA	False	AATACA	-22	NA	32538826	32526921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32535768_32537028_32538777
transcript_3843.known	chr1	+	880	6	FSM	ENSG00000160050.16	ENST00000373602.10	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	15.2	4485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197182	True	NA	NA	False	ATTAAA	-16	NA	32200594	32205387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597_32204621_32205193
transcript_38432.known	chr13	-	3573	3	FSM	ENSG00000244754.9	ENST00000483088.2	3573	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	112.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGACAGATTGAGACCCTG	-32532846	True	NA	NA	False	NA	NA	NA	32538819	32533563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32537028_32538617_32538685_32538777
transcript_38434.known	chr13	-	9427	6	FSM	ENSG00000244754.9	ENST00000267068.5	9427	6	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	16.8237926758505	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAAGTTGGATTTTTTTA	-32532809	True	NA	-6	True	AATAAA	-16	NA	32538782	32510291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32518004_32521372_32521450_32522181_32522271_32527407_32527533_32535768_32537028_32538617
transcript_38435.known	chr13	-	2181	3	FSM	ENSG00000244754.9	ENST00000674433.1	2181	3	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	19	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGACAAAAAGTGTGCCTGG	-32532852	True	NA	NA	False	AAAAAG	-30	NA	32538825	32526818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32527533_32535768_32537028_32538617
transcript_38436.known	chr13	-	3691	2	FSM	ENSG00000244754.9	ENST00000674369.1	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTCTCAAAAAAAAAAAAAAA	-32532852	True	NA	NA	False	NA	NA	NA	32538825	32533544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32537028_32538617
transcript_3844.known	chr1	+	633	5	FSM	ENSG00000160050.16	ENST00000681230.1	633	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	171.42345230452	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197235	True	NA	NA	False	ATTAAA	-16	NA	32200647	32205387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204597_32204621_32205193
transcript_38440.known	chr13	-	541	6	FSM	ENSG00000139597.18	ENST00000495479.5	541	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.71118469422501	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGTTCTGTGAAAAATT	-32427972	False	NA	-85	True	NA	NA	NA	32428014	32401816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32401902_32403149_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
transcript_38441.known	chr13	-	2994	5	FSM	ENSG00000139597.18	ENST00000380139.8	2994	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.4372685153431	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-32428091	False	NA	NA	False	AATAAA	-22	NA	32428133	32400722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32403201_32404202_32404272_32407249_32407339_32407644_32407773_32427903
transcript_38442.known	chr13	-	2999	5	FSM	ENSG00000139597.18	ENST00000380130.7	2999	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	2.58602010819715	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTATGATGCAGTATGT	-32428088	False	NA	NA	False	AATAAA	-22	NA	32428130	32400722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32403201_32404320_32404398_32407249_32407339_32407644_32407773_32427903
transcript_38447.known	chr13	-	1145	2	FSM	ENSG00000139597.18	ENST00000464470.1	1145	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTCTTGTCTCCCAAA	-32427972	False	NA	-1	True	AATAAA	-18	NA	32428014	32424921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_32425956_32427903
transcript_3845.known	chr1	+	1415	5	FSM	ENSG00000160050.16	ENST00000421922.6	1415	5	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	12.49749974995	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTCCGTGTCCTGCTTC	32197220	True	NA	NA	False	ATTAAA	-16	NA	32200632	32205387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204185_32204380_32204597
transcript_38450.known	chr13	+	972	3	FSM	ENSG00000083642.19	ENST00000493653.1	972	3	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	6	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCTTGTGTGGTACTGT	32580207	True	NA	NA	False	AAAAAG	-5	NA	32586550	32652605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_32586594_32648753_32648881_32651803
transcript_38452.known	chr13	-	524	2	FSM	ENSG00000133121.21	ENST00000344312.5	524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTATGTGTTATCACTG	-33285527	True	NA	NA	False	NA	NA	NA	33285736	33275950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_33276208_33285469
transcript_38456.known	chr13	+	1461	9	FSM	ENSG00000133119.13	ENST00000434425.5	1461	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	151.01567592472	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTCTGCTATTTTCT	33810512	True	NA	16	True	AATAAA	-27	NA	33818068	33966558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33966086
transcript_38457.known	chr13	+	2306	9	FSM	ENSG00000133119.13	ENST00000380071.8	2306	9	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_8	34.069552022297	808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTAAGTCTTTTTGTGGA	33810592	True	NA	14	True	AATAAA	-18	NA	33818148	33837500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_33818266_33821131_33821270_33823916_33823985_33825788_33825887_33829835_33830018_33830718_33830856_33831255_33831355_33835147_33835218_33836103
transcript_38459.known	chr13	-	4612	13	FSM	ENSG00000133083.15	ENST00000379893.5	4612	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	10.506611674983	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTTTTGTGTTCAATG	-35854704	True	NA	-4	True	AATAAA	-14	NA	35855642	35771338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_35774700_35793365_35793480_35805698_35805780_35808223_35808321_35809017_35809096_35810834_35810969_35822728_35822876_35827634_35827755_35828249_35828308_35836032_35836142_35839091_35839177_35854498_35854594_35855509
transcript_3846.known	chr1	+	780	6	FSM	ENSG00000160050.16	ENST00000461819.5	780	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.894424258322	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAAGCGGCTCCGTGTCCTG	32197231	True	NA	NA	False	ATTAAA	-12	NA	32200643	32205383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32200710_32201912_32202100_32203878_32204046_32204232_32204380_32204597_32204621_32205193
transcript_38461.nic	chr13	-	1413	3	ISM	ENSG00000133083.15	ENST00000379893.5	4612	13	-124	66777	18	7784	5prime_fragment	FALSE	canonical	3	27	junction_2	8.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTGGCTAAGCCTTTTT	-35854828	True	NA	NA	False	AATGAA	-22	NA	35855766	35838115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_35839177_35854498_35854594_35855509
transcript_38462.known	chr13	-	5247	3	FSM	ENSG00000133083.15	ENST00000460982.1	5247	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTTGTTCAGTGAGTTTC	-35855761	False	NA	0	True	AATAAA	-15	NA	35855784	35845899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_35850777_35854498_35854594_35855509
transcript_38464.nnic	chr13	-	2666	16	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-31	577	combination_of_known_splicesites	FALSE	canonical	3	60	junction_5	76.9665439583257	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-36293945	True	NA	-12	True	AATAAA	-21	NA	36297873	36168216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_38465.nnic	chr13	-	2625	15	NIC	ENSG00000250709.1	novel	2051	16	NA	NA	-31	577	combination_of_known_splicesites	FALSE	canonical	3	60	junction_5	71.2341998234682	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTGTAATCCATTTTTGT	-36293945	True	NA	-12	True	AATAAA	-21	NA	36297873	36168216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36169055_36170530_36170788_36173691_36173811_36174475_36174568_36174721_36174870_36189945_36190057_36191794_36191895_36193620_36193726_36193805_36193868_36201878_36202094_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_38478.known	chr13	-	854	8	FSM	ENSG00000242715.8	ENST00000506800.5	854	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	110.946208698134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36227382_36240569_36240667_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36297636
transcript_38489.known	chr13	-	753	7	FSM	ENSG00000242715.8	ENST00000491049.6	753	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	88.3240561166033	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_3849.known	chr1	+	1305	10	FSM	ENSG00000084623.12	ENST00000678162.1	1305	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	544.820459723507	941	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTCAGATATTTTGTGG	32207687	True	NA	21	True	AATAAA	-22	NA	32222417	32231592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38491.known	chr13	-	624	7	FSM	ENSG00000242715.8	ENST00000379862.6	624	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	90.2016260016045	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTTCCATTTATAAT	-36293823	True	NA	-95	True	NA	NA	NA	36297751	36231161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283506_36283591_36283703_36297636
transcript_38494.known	chr13	-	716	6	FSM	ENSG00000242715.8	ENST00000239860.10	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	86.4097216752837	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGAAAAGATTGGGACCCA	-36293821	True	NA	46	True	NA	NA	NA	36297749	36227119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36227382_36248605_36248683_36253802_36253857_36254044_36254144_36283591_36283703_36297636
transcript_385.known	SIRV5	+	1890	17	FSM	SIRV5A	SIRV501	1890	17	0	0	0	0	multi-exon	FALSE	canonical	3	2069	junction_14	3513.9813329888	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1056	10991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6658_6723_6826_6958_7144_7308_7681_7763_7870_8017_8277_8382_8454_8586_10858
transcript_38506.nic	chr13	-	1757	4	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-197	0	combination_of_known_junctions	FALSE	canonical	3	81	junction_1	86.7422747120585	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36298001	False	NA	-2	True	AATAAA	-17	NA	36298037	36280056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36281261_36283468_36283510_36283591_36283703_36297636
transcript_38509.nnic	chr13	-	1544	3	NIC	ENSG00000242715.8	novel	1632	5	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	119.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293937	True	NA	-2	True	AATAAA	-17	NA	36297865	36280056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36281261_36283591_36283703_36297636
transcript_38511.known	chr13	-	887	3	FSM	ENSG00000242715.8	ENST00000485600.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	38	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCTTAGGGCATATCTAAG	-36293909	True	NA	NA	False	AGTAAA	-2	NA	36297837	36282827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36283407_36283591_36283699_36297636
transcript_38513.known	chr13	-	1306	9	FSM	ENSG00000242715.8	ENST00000479850.6	1306	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	125.952806141824	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTCGAGCTGACTTCACC	-36293912	True	NA	-12	True	AATGAA	-14	NA	36297840	36227044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36227382_36244456_36244614_36248605_36248683_36253802_36253857_36254044_36254144_36274301_36274528_36283468_36283510_36283591_36283703_36297636
transcript_38514.known	chr13	-	1158	8	FSM	ENSG00000242715.8	ENST00000239859.8	1158	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	63.5259869691779	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATCAAGTCCATTTTAAG	-36293886	True	NA	NA	False	TTTAAA	-22	NA	36297814	36230774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36231293_36248605_36248683_36253802_36253857_36254044_36254144_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_38515.known	chr13	-	1632	5	FSM	ENSG00000242715.8	ENST00000477250.1	1632	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	66.3720573735665	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTTGTATAGTATTTCAT	-36293904	True	NA	-2	True	AATAAA	-17	NA	36297832	36280056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36281261_36283468_36283510_36283591_36283703_36295777_36295858_36297636
transcript_38519.known	chr13	-	3018	10	FSM	ENSG00000133104.14	ENST00000494062.2	3018	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	363.450881426743	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	-36335807	False	68	-12	True	ATTAAA	-17	NA	36346493	36303601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346313
transcript_38520.nnic	chr13	-	3072	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	442	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTATCATATCTGCTT	NA	False	NA	-12	True	ATTAAA	-17	NA	36346815	36303601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_38524.nnic	chr13	-	2955	10	NIC	ENSG00000133104.14	novel	3018	10	NA	NA	-18	-117	combination_of_known_splicesites	FALSE	canonical	3	189	junction_9	318.920323653897	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATTGAGACTGTATT	NA	False	NA	-10	True	AATAAA	-21	NA	36346815	36303718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36336286_36336359_36346581
transcript_38525.known	chr13	-	4900	9	FSM	ENSG00000133104.14	ENST00000438666.7	4900	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	307.883805192803	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTTTTCTTGACCTCC	-36335708	False	10686	1	True	TATAAA	-21	NA	36346394	36301637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_38526.known	chr13	-	4944	9	FSM	ENSG00000133104.14	ENST00000451493.5	4944	9	0	0	0	0	multi-exon	FALSE	canonical	3	785	junction_8	78.4624711247358	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGTGTTTTCTTGACCT	NA	False	NA	-1	True	TATAAA	-19	NA	36346797	36301639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36304633_36312144_36312236_36312318_36312478_36314226_36314422_36326574_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346581
transcript_38548.known	chr13	-	2001	5	FSM	ENSG00000133104.14	ENST00000495510.1	2001	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	402.829601072215	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCTACTAGTTTATGATAT	-36335597	False	86	NA	False	AATAAA	-15	NA	36346283	36325922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36326699_36329361_36329518_36331398_36331597_36335020_36335833_36346224
transcript_38554.known	chr13	+	1699	9	FSM	ENSG00000133101.10	ENST00000625767.1	1699	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	4.49826355386165	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432126	False	NA	NA	False	AATAAA	-16	NA	36432522	36442870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36432730_36433035_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_38555.known	chr13	+	1730	9	FSM	ENSG00000133101.10	ENST00000255465.7	1730	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	5.91607978309962	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTGTTAGATTTATTTA	36432098	True	NA	NA	False	AATAAA	-16	NA	36432494	36442870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36432730_36433032_36433222_36437628_36437876_36438066_36438192_36438643_36438868_36439978_36440184_36441117_36441232_36442170_36442305_36442613
transcript_38556.known	chr13	+	3099	2	FSM	ENSG00000180440.4	ENST00000315190.4	3099	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCTTTGATTCTTT	36673840	True	NA	11	True	AATAAA	-20	NA	36674019	36697839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36674185_36694905
transcript_38557.known	chr13	+	2306	3	FSM	ENSG00000133111.4	ENST00000255476.3	2306	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	3	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAGCTGATTTCTTTATTC	36817166	True	NA	21	True	ATTAAA	-21	NA	36819221	36829104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_36819958_36825427_36825536_36827642
transcript_38559.known	chr13	-	2923	26	FSM	ENSG00000102710.21	ENST00000350612.11	2923	26	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	108.254987875848	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGCTGTTTATTTGG	-37053954	True	NA	0	True	AATACA	-25	NA	37059688	37009311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37010551_37010656_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_38569.known	chr13	-	2843	25	FSM	ENSG00000102710.21	ENST00000360252.8	2843	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_20	92.4143372113993	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATGTGGTGGCTGTTTAT	-37053979	True	NA	-4	True	AATACA	-21	NA	37059713	37009315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_38570.known	chr13	-	2836	25	FSM	ENSG00000102710.21	ENST00000475892.5	2836	25	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	94.7504031067356	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGGTTGGTTTGCCTAAGT	-37053915	True	NA	-43	True	AATAAA	-24	NA	37059649	37009492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022318_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_38573.known	chr13	-	2681	25	FSM	ENSG00000102710.21	ENST00000356185.7	2681	25	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_24	121.178128756343	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGGTTTGCCTAAG	-37053916	True	NA	-44	True	AATAAA	-23	NA	37059650	37009493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37009810_37012191_37012298_37017244_37017365_37019341_37019398_37021447_37021603_37022010_37022081_37024034_37024194_37024339_37024443_37025319_37025438_37026203_37026237_37026789_37026817_37028147_37028306_37029764_37029837_37031566_37031624_37031738_37031896_37033448_37033589_37040404_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059479
transcript_3861.known	chr1	-	969	7	FSM	ENSG00000160055.20	ENST00000483001.5	969	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	16.996731711976	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTTCCAGGGACAAGG	-32221841	True	NA	NA	False	GGGGCT	-30	NA	32222335	32215846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_38627.known	chr13	-	1057	10	FSM	ENSG00000120697.10	ENST00000681893.1	1057	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_9	135.540982823246	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCCTTTTGATAATTTTAA	-37000721	False	20	-12	True	AATAAA	-15	NA	37000741	36949838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_37000696
transcript_38628.known	chr13	-	1110	10	FSM	ENSG00000120697.10	ENST00000680795.1	1110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	178.828906437907	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCATTGTCTGCCTTTTG	-36995712	True	NA	-22	True	AATAAA	-5	NA	36999324	36949848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995426_36995617_36999234
transcript_38637.known	chr13	-	769	9	FSM	ENSG00000102710.21	ENST00000476109.5	769	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_5	225.174897302075	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTTTTGTTTTTTAA	-37053905	True	NA	NA	False	NA	NA	NA	37059639	37040403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37040459_37040575_37040693_37044077_37044182_37045246_37045374_37047345_37047409_37047534_37047602_37047877_37047937_37051487_37051584_37059558
transcript_38638.known	chr13	-	734	9	FSM	ENSG00000102710.21	ENST00000497318.1	734	9	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_4	139.186700154864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAGTTGTTTTGTTTTTTA	-37053895	True	NA	NA	False	NA	NA	NA	37059629	37040404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37040459_37040575_37040693_37044077_37044182_37045246_37045377_37047534_37047602_37047877_37047937_37048563_37048600_37051487_37051584_37059558
transcript_38642.known	chr13	-	960	8	FSM	ENSG00000120697.10	ENST00000679673.1	960	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	152.634417174248	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995688	True	NA	9	True	TATAAA	-33	NA	36999300	36949737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36999234
transcript_38647.known	chr13	-	1219	10	FSM	ENSG00000120697.10	ENST00000239891.4	1219	10	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_7	29.1653438853482	1163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTCTTTTGTTTGTTTA	-36995728	True	NA	9	True	TATAAA	-33	NA	36999340	36949737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_38648.known	chr13	-	919	9	FSM	ENSG00000120697.10	ENST00000680488.1	919	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	142.287506039708	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTGCCTTTTGATA	-36995688	True	NA	-19	True	AATAAA	-8	NA	36999300	36949845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_38649.known	chr13	-	1064	9	FSM	ENSG00000120697.10	ENST00000681043.1	1064	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	139.983871838866	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-36995730	True	NA	-21	True	AATAAA	-6	NA	36999342	36949847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36995424_36995597_36999234
transcript_38650.known	chr13	-	1044	9	FSM	ENSG00000120697.10	ENST00000680671.1	1044	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	144.89284833973	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGTCATTGTCTGCCT	-36995728	True	NA	-26	True	AATAAA	-1	NA	36999340	36949852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36965574_36965727_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_38651.known	chr13	+	1166	11	FSM	ENSG00000120699.14	ENST00000389704.4	1166	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	590.984949046928	3981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGATTCAGTGCTCT	36986997	True	NA	11	True	ATTAAA	-24	NA	37000785	37009614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_38652.known	chr13	+	2423	10	FSM	ENSG00000120699.14	ENST00000490537.6	2423	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	777.533628346631	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTTCTATTATTTCTTA	36986998	True	NA	26	True	AATAAA	-24	NA	37000786	37009401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37000823_37002272_37002310_37002487_37002552_37002933_37004562_37005956_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728_37008836_37009183
transcript_38653.known	chr13	-	897	8	FSM	ENSG00000120697.10	ENST00000681208.1	897	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	153.506497901422	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-36995728	True	NA	-21	True	AATAAA	-6	NA	36999340	36949847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36952513_36952600_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_38654.known	chr13	-	1023	9	FSM	ENSG00000120697.10	ENST00000681763.1	1023	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	141.985859771317	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTCTGCCTTTTGA	-36995728	True	NA	-21	True	AATAAA	-6	NA	36999340	36949847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_36950058_36965574_36965727_36971976_36972037_36985626_36985741_36989483_36989577_36993603_36993673_36994988_36995036_36995424_36995597_36999234
transcript_38655.known	chr13	+	738	11	FSM	ENSG00000120699.14	ENST00000474661.5	738	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	763.790030047526	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAATAGTAATGGATGAGG	36986997	True	NA	NA	False	NA	NA	NA	37000785	37008785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_37000823_37001748_37001802_37002272_37002310_37002487_37002552_37002933_37003008_37004515_37004562_37005919_37006026_37006114_37006161_37006974_37007072_37008056_37008178_37008728
transcript_38656.known	chr13	-	3196	22	FSM	ENSG00000133110.15	ENST00000379743.8	3196	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.41100308476467	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAAATTAGTGTTTCTTGA	-37598655	True	NA	NA	False	ATTAAA	-10	NA	37598750	37562590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_37563371_37564518_37564561_37569299_37569384_37569743_37569822_37570579_37570670_37571368_37571459_37577752_37577799_37578843_37578912_37579018_37579122_37579228_37579360_37579860_37579992_37580560_37580698_37582365_37582515_37583968_37584104_37584715_37584929_37586138_37586281_37586781_37586929_37587821_37587987_37590371_37590530_37592099_37592165_37597183_37597283_37598607
transcript_38661.nic	chr13	-	2082	4	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-562	55083	-562	-28520	5prime_fragment	FALSE	canonical	3	29	junction_1	2.82842712474619	54	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCGTTGCTCAGAAAATAT	-37870155	True	NA	NA	False	AATAAA	-21	NA	37870364	37691947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_37692336_37745936_37746456_37782955_37783361_37869594
transcript_38663.nic	chr13	-	1103	2	ISM	ENSG00000133107.15	ENST00000355779.6	2784	11	-214	145815	-214	-119252	5prime_fragment	FALSE	canonical	3	35	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAAACATTTCTATGTAA	-37869807	False	NA	NA	False	AATAAA	-26	NA	37870016	37782679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_37783361_37869594
transcript_3869.known	chr1	-	721	6	FSM	ENSG00000160055.20	ENST00000344461.7	721	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	14.9452333538155	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-32221844	True	NA	-3	True	AATAAA	-16	NA	32222338	32216199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216518_32216888_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_38691.known	chr13	+	3168	6	FSM	ENSG00000120686.12	ENST00000239878.9	3168	6	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_5	81.2034482026472	3694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCTTGAATTCTGATTTAT	38340601	True	NA	NA	False	ATTAAA	-22	NA	38349850	38363619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350056_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_38693.known	chr13	+	846	6	FSM	ENSG00000120686.12	ENST00000379649.5	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	383.40547726917	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATTCATCTGAGATAAAAA	38340601	True	NA	NA	False	ATTAAA	-17	NA	38349850	38361125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350228_38354238_38354297_38358092_38358133_38359300_38359334_38360710
transcript_38698.known	chr13	+	777	3	FSM	ENSG00000120686.12	ENST00000494372.1	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_1	52	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCGGAGACTTAGGGTTC	38340599	True	NA	NA	False	AAAAAG	-35	NA	38349848	38354885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_38349922_38349998_38350056_38354238
transcript_38699.known	chr13	-	5182	13	FSM	ENSG00000120685.20	ENST00000352251.8	5182	13	0	0	0	0	multi-exon	FALSE	canonical	3	396	junction_2	37.2028971392761	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGTGTTTTTTATATATG	-39032526	True	NA	-23	True	CATAAA	-17	NA	39038089	39009864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_39011488_39012082_39012234_39012690_39014477_39017499_39017545_39022325_39022413_39023051_39023131_39024472_39024557_39026276_39026388_39028226_39028321_39029280_39029376_39031562_39031632_39034130_39034197_39037197
transcript_38700.known	chr13	+	3298	7	FSM	ENSG00000188811.14	ENST00000470258.5	3298	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	38.9429782573901	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036810	True	NA	35	True	ATTAAA	-23	NA	39038310	39050109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39038466_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_38701.known	chr13	+	3411	7	FSM	ENSG00000188811.14	ENST00000379600.8	3411	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	28.008431270284	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036955	True	NA	35	True	ATTAAA	-23	NA	39038455	39050109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089_39044182_39047039_39047153_39047673
transcript_38705.known	chr13	+	3275	6	FSM	ENSG00000188811.14	ENST00000379599.6	3275	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	42.6680208118446	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTCTATAACTTTTTATT	39036890	True	NA	35	True	ATTAAA	-23	NA	39038390	39050109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39038724_39039135_39039289_39039563_39039712_39044089_39044182_39047039_39047153_39047673
transcript_38711.nic	chr13	+	1029	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-138	5899	7	-254	5prime_fragment	FALSE	canonical	3	66	junction_3	29.2446576317795	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTGTCTGAATATGTTT	39036817	True	NA	3	True	AATACA	-19	NA	39038317	39044210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_38712.nic	chr13	+	2100	5	ISM	ENSG00000188811.14	ENST00000379600.8	3411	7	-138	4828	7	817	5prime_fragment	FALSE	canonical	3	66	junction_3	29.2446576317795	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCCTGAGCTTGGGTGAC	39036817	True	NA	7	True	ATTAAA	-14	NA	39038317	39045281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563_39039712_39042104_39042306_39044089
transcript_38718.nic	chr13	+	775	3	ISM	ENSG00000188811.14	ENST00000470258.5	3298	7	-1	10080	-1	-1788	5prime_fragment	FALSE	canonical	2	7	junction_1	67	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGCCAGGCG	NA	False	NA	NA	False	AATACA	-9	NA	39038309	39040029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038466_39039135_39039289_39039563
transcript_38721.nic	chr13	+	1025	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-73	10080	7	-1788	5prime_fragment	FALSE	canonical	3	112	junction_1	14.5	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAATCAGCCAGGCG	39036817	True	NA	NA	False	AATACA	-9	NA	39038317	39040029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_38722.nic	chr13	+	1199	3	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-73	9906	7	-1614	5prime_fragment	FALSE	canonical	3	112	junction_1	14.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAATTTGACAAGGA	39036817	True	NA	NA	False	NA	NA	NA	39038317	39040203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135_39039289_39039563
transcript_38726.nic	chr13	+	1306	2	ISM	ENSG00000188811.14	ENST00000379599.6	3275	6	-73	10074	7	-1782	intron_retention	FALSE	canonical	3	112	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCAGCCAGGCGTGGTGG	39036817	True	NA	NA	False	AATACA	-15	NA	39038317	39040035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_39038724_39039135
transcript_38729.known	chr13	-	2132	4	FSM	ENSG00000183722.9	ENST00000379589.4	2132	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	11.0252236056942	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39602938	True	NA	-2	True	AATAAA	-19	NA	39603193	39342891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_39344055_39378427_39378527_39600831_39601391_39602882
transcript_38730.nnic	chr13	-	1403	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180211	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_2	15.5	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39422893	True	NA	-2	True	AATAAA	-19	NA	39422982	39342891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_39344055_39378427_39378527_39422841
transcript_38731.nnic	chr13	-	1377	3	NNC	ENSG00000183722.9	novel	2132	4	NA	NA	180201	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	15.5	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAGATGAGTCATGGAGTG	-39422903	True	NA	-2	True	AATAAA	-19	NA	39422992	39342891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_39344055_39378427_39378527_39422877
transcript_38733.known	chr13	+	3574	19	FSM	ENSG00000133103.17	ENST00000455146.8	3574	19	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_12	17.6211853415003	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGCAGCAATTATTGC	39653425	True	NA	13	True	AATAAA	-14	NA	39655661	39752628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_39655880_39659363_39659508_39660809_39660882_39665095_39665155_39677467_39677580_39679537_39679621_39679974_39680046_39682170_39682265_39687502_39687632_39687707_39687800_39689759_39689825_39694633_39694726_39699500_39699619_39719235_39719368_39719659_39719828_39723332_39723441_39724507_39724562_39727468_39727549_39750945
transcript_38740.known	chr13	-	5779	3	FSM	ENSG00000150907.10	ENST00000379561.6	5779	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	19	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTTGTCATTGGTTCAA	-40661067	True	NA	-6	True	ATTAAA	-26	NA	40666641	40555666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40559035_40559508_40560861_40665582
transcript_38749.known	chr13	+	3821	7	FSM	ENSG00000102743.15	ENST00000338625.9	3821	7	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_6	24.5860168026914	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTCTGATGAATTTCA	40789450	True	NA	9	True	ATTAAA	-15	NA	40789610	40812460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_40789664_40793157_40793282_40799056_40799316_40805117_40805256_40807293_40807464_40808437_40808597_40809542
transcript_38752.known	chr13	-	572	3	FSM	ENSG00000239827.8	ENST00000633814.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGACTTACAGAAAATTTG	-40921579	True	NA	NA	False	NA	NA	NA	40921740	40882576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40882973_40908158_40908213_40921618
transcript_38753.known	chr13	-	291	3	FSM	ENSG00000239827.8	ENST00000632751.1	291	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTTAAATTGGTCTTTCA	-40921645	False	NA	NA	False	AATAAA	-20	NA	40921661	40913915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_40914106_40921473_40921532_40921618
transcript_38757.known	chr13	+	2388	10	FSM	ENSG00000120688.9	ENST00000379487.5	2388	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_8	23.7133082393478	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAATATTGTTATTCTAA	41057355	True	NA	NA	False	ATTAAA	-19	NA	41061508	41084006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41061676_41062643_41062717_41065015_41065079_41065163_41065288_41068560_41068738_41071526_41071574_41072781_41072858_41076043_41076238_41080645_41080810_41082703
transcript_38761.known	chr13	-	5234	1	FSM	ENSG00000165572.8	ENST00000379485.2	5234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGCTTCCTGACTTTTT	-41131690	True	NA	-6	True	AATAAA	-14	NA	41132802	41127568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41127600_41132800
transcript_38768.known	chr13	+	613	4	FSM	ENSG00000278390.6	ENST00000620300.4	613	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.98887651569859	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAACATCTTACCAGGAGA	41132644	True	NA	NA	False	ATTAAA	-35	NA	41132951	41175659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41175372
transcript_3877.known	chr1	-	972	5	FSM	ENSG00000160055.20	ENST00000487174.1	972	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	20.8686367547092	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACAGCTACCTCATGGA	-32221825	True	NA	NA	False	NA	NA	NA	32222319	32216729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866
transcript_38771.known	chr13	+	605	4	FSM	ENSG00000278390.6	ENST00000616251.2	664	4	59	0	52	0	multi-exon	FALSE	canonical	2	2	junction_3	5.35412613473634	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGAACCATTGCTATTT	41132703	True	NA	NA	False	AATAAA	-42	NA	41133010	41187568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41133056_41146426_41146508_41162262_41162404_41187230
transcript_38779.nic	chr13	+	365	2	ISM	ENSG00000278390.6	ENST00000620300.4	613	4	-47	29019	-34	-6	5prime_fragment	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTAATTCTTCCCACTT	41132597	True	NA	NA	False	AATAAA	-14	NA	41132904	41146640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_41133056_41146426
transcript_38780.known	chr13	-	4736	1	FSM	ENSG00000120696.9	ENST00000379483.4	4736	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTCCTGACTTTCTAATT	-41191607	True	NA	-16	True	AATAAA	-18	NA	41194569	41189833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41189800_41194600
transcript_3879.known	chr1	-	1107	5	FSM	ENSG00000160055.20	ENST00000309777.11	1107	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	11.1887220003001	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGGTTAGTAAGTATTC	-32221859	True	NA	-3	True	AATAAA	-16	NA	32222353	32216199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216948_32217258_32217352_32221130_32221198_32221866_32222019_32222306
transcript_38801.nnic	chr13	-	1711	11	NIC	ENSG00000120662.16	novel	1948	12	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_9	30.51573364676	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGAAGTCACATTTCCTG	-41263540	False	NA	-12	True	CATAAA	-17	NA	41263592	41216974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262214_41262332_41263484
transcript_38807.known	chr13	-	2184	10	FSM	ENSG00000120662.16	ENST00000379480.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	25.5623179458638	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTGTTTGACTTCTATT	-41262100	True	NA	-17	True	TATAAA	-25	NA	41263576	41216368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41217229_41223255_41223355_41226431_41226569_41233889_41234008_41240260_41240434_41252644_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_38833.nic	chr13	-	1428	7	NIC	ENSG00000120662.16	novel	1948	12	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_4	36.7215498341535	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGCTAATGTGTTTG	-41263540	False	NA	1	True	TATAAA	-25	NA	41263592	41252281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41261690_41261826_41262214_41262332_41263484
transcript_38839.nnic	chr13	-	1293	6	NIC	ENSG00000120662.16	novel	1561	7	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	42.7551166528639	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGCTAATGTGTTTG	-41263540	False	NA	1	True	TATAAA	-25	NA	41263592	41252281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262214_41262332_41263484
transcript_38840.known	chr13	-	820	6	FSM	ENSG00000120662.16	ENST00000452359.5	820	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.295030175465	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACCAGCAGATTATGG	-41262071	True	NA	NA	False	TATAAA	-25	NA	41263547	41252663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41262410_41262482_41263484
transcript_38844.nic	chr13	-	1171	5	ISM	ENSG00000120662.16	ENST00000379480.9	2184	10	-11	35913	-10	0	5prime_fragment	FALSE	canonical	3	21	junction_4	37.0700350687722	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGGCTAATGTGTTTG	-41263535	False	NA	1	True	TATAAA	-25	NA	41263587	41252281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492_41260916_41263484
transcript_38845.known	chr13	-	737	4	FSM	ENSG00000120662.16	ENST00000480434.5	737	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTAAGTGGCTAATGTGTT	-41260534	False	NA	-1	True	TATAAA	-23	NA	41260586	41252283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41252753_41252948_41253031_41254528_41254621_41260492
transcript_38846.known	chr13	-	728	3	FSM	ENSG00000120662.16	ENST00000498245.1	728	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTAGGAAGCAGTGCTGTT	-41263438	False	NA	NA	False	NA	NA	NA	41263490	41261432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41261826_41262214_41262332_41263272
transcript_38848.known	chr13	+	4285	20	FSM	ENSG00000172766.19	ENST00000379406.8	4285	20	0	0	0	0	multi-exon	TRUE	canonical	3	92	junction_5	10.7654417857376	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTATTTATGTTTGTGTTT	41308639	True	NA	14	True	AATAAA	-18	NA	41311266	41377030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303_41358474_41358809_41358963_41362030_41362160_41367438_41367653_41369089_41369284_41372202_41372312_41372731_41372831_41373636_41373781_41374741_41374840_41375404
transcript_3885.known	chr1	-	737	3	FSM	ENSG00000160055.20	ENST00000484490.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	23.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGTCTATTAGCCTTG	-32221865	True	NA	NA	False	NA	NA	NA	32222359	32216356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32216948_32217258_32217352_32222306
transcript_38855.known	chr13	+	1751	11	FSM	ENSG00000172766.19	ENST00000403412.7	1751	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	8.0876448982383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTTTTGTCTGTGTAA	41308652	True	NA	8	True	AATAAA	-22	NA	41311279	41358718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_41311583_41316845_41316931_41318805_41318911_41320666_41320825_41323055_41323191_41325697_41325852_41328723_41328844_41331273_41331370_41336649_41336757_41355143_41355217_41358303
transcript_38858.nic	chr13	+	494	3	ISM	ENSG00000172766.19	ENST00000403412.7	1751	11	-51	39858	-38	-17827	5prime_fragment	FALSE	canonical	3	113	junction_2	4	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAGTTTGTTCGTAAAG	41308601	True	NA	NA	False	AAAAAG	-8	NA	41311228	41318860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_41311583_41316845_41316931_41318805
transcript_38859.known	chr13	-	3475	26	FSM	ENSG00000102763.18	ENST00000281496.6	3475	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_22	11.8222840432803	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCTCAGTCCTTTTGTTG	-41959024	True	NA	-5	True	AATAAA	-26	NA	41961120	41719336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_38860.known	chr13	-	7174	45	FSM	ENSG00000102763.18	ENST00000379310.8	7174	45	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_41	11.8121269454407	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTACTACCTGGTGAGT	-41959013	True	NA	-10	True	AATAAA	-26	NA	41961109	41566834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41568306_41570467_41570707_41575739_41575839_41587511_41587671_41590639_41590766_41605167_41605277_41611575_41611733_41614975_41615085_41670945_41671148_41675214_41675297_41685046_41685243_41689353_41689509_41690165_41690276_41691319_41691446_41691873_41691939_41692861_41692973_41699070_41699271_41701391_41701531_41703302_41703412_41719590_41719743_41721369_41721576_41727193_41727314_41729541_41729678_41732079_41732156_41761127_41761205_41777984_41778057_41783794_41783902_41787436_41787544_41811224_41811341_41816697_41816776_41819217_41819387_41830528_41830643_41833370_41833532_41865735_41865814_41865901_41866037_41868345_41868478_41883386_41883492_41885919_41886029_41886780_41886831_41887196_41887362_41891419_41891588_41907585_41907697_41912037_41912169_41949935_41950014_41960852
transcript_38861.known	chr13	-	416	3	FSM	ENSG00000102763.18	ENST00000379302.2	416	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAATTATAATTCTTTGG	NA	False	NA	NA	False	AATAAA	-16	NA	41868403	41865590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_41865814_41865901_41866037_41868345
transcript_38865.nic	chr13	+	534	4	NIC	ENSG00000283554.1	novel	824	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	2	8	junction_3	1.69967317119759	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTCAGAAGCACTGC	NA	False	NA	NA	False	AATAAA	-16	NA	42424871	42444144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_42424979_42435199_42435294_42437317_42437473_42443966
transcript_38866.known	chr13	+	824	4	FSM	ENSG00000283554.1	ENST00000637043.1	824	4	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_3	4.02768199119819	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCCGAGGCGGACAGAT	42424853	True	NA	NA	False	NA	NA	NA	42424891	42485956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_42424979_42435199_42435294_42437317_42437473_42485468
transcript_38871.known	chr13	+	2201	5	FSM	ENSG00000120659.15	ENST00000398795.7	2201	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	7.11951543294907	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	42573791	True	NA	13	True	AATAAA	-18	NA	42574151	42608013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_42574523_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_38872.nnic	chr13	+	2019	5	NNC	ENSG00000120659.15	novel	1520	7	NA	NA	349	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	18.6597829569371	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGATTTTGTACTTCAC	42574627	False	NA	13	True	AATAAA	-18	NA	42574652	42608013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_42574842_42581125_42581294_42600751_42600798_42600882_42600982_42606496
transcript_3888.known	chr1	-	1538	11	FSM	ENSG00000160055.20	ENST00000491434.5	1538	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	16.7812395251364	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGCTGTGCCAAATATAC	-32221839	True	NA	-5	True	AATATA	-13	NA	32222333	32214476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32215050_32215135_32215217_32215672_32215796_32216193_32216282_32216383_32216518_32216888_32216948_32217258_32217352_32217436_32217578_32221130_32221198_32221866_32222019_32222306
transcript_38880.known	chr13	-	3106	11	FSM	ENSG00000133106.15	ENST00000313624.12	3106	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.89827534923789	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTTTTTCCTTTGTGGTT	-42992227	False	NA	NA	False	AATAAA	-41	NA	42992241	42886387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_42888503_42895008_42895109_42900309_42900384_42917540_42917625_42926335_42926430_42953947_42954022_42963254_42963339_42964065_42964140_42969093_42969178_42970611_42970671_42991977
transcript_3889.known	chr1	+	1250	10	FSM	ENSG00000084623.12	ENST00000677353.1	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	562.343311509971	3006	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207697	True	NA	33	True	AATAAA	-34	NA	32222427	32231604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38894.known	chr13	-	2059	7	FSM	ENSG00000151773.13	ENST00000444614.8	2059	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	8.80814017448254	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTCGTATTCTGTGACTA	-43879103	True	NA	NA	False	AATAAA	-24	NA	43879740	43836351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_43837430_43858780_43858898_43859671_43860071_43868693_43868804_43869330_43869490_43874841_43874928_43879630
transcript_3890.known	chr1	+	1256	10	FSM	ENSG00000084623.12	ENST00000678968.1	1256	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	564.102521108519	987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTGGTGTCTGTTTCAT	32207676	True	NA	33	True	AATAAA	-34	NA	32222406	32231604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38901.nnic	chr13	-	1253	5	NNC	ENSG00000151773.13	novel	272	2	NA	NA	-101	-2297	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	10.7004672795163	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGCCTTGTGTCAATTTC	-43879826	True	NA	NA	False	AATAAA	-21	NA	43879841	43838648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_43839089_43858780_43858898_43859671_43860071_43874841_43874928_43879630
transcript_38904.nic	chr13	-	1237	5	ISM	ENSG00000151773.13	ENST00000476570.2	3467	7	-150	5312	-101	-1249	5prime_fragment	FALSE	canonical	2	8	junction_2	10.4970233876085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTTGTTGTAGAAAATG	-43879826	True	NA	-3	True	AATAAA	-19	NA	43879841	43859399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_43860071_43868693_43868804_43869330_43869490_43874841_43874928_43879630
transcript_3891.known	chr1	+	1141	9	FSM	ENSG00000084623.12	ENST00000677640.1	1141	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_4	555.607761262386	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38911.nic	chr13	-	882	3	NIC	ENSG00000151773.13	novel	2059	7	NA	NA	-15	-1249	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	11	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATTTGTTGTAGAAAATG	-43879118	True	NA	-3	True	AATAAA	-19	NA	43879755	43859399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_43860071_43874841_43874928_43879630
transcript_38915.nic	chr13	-	383	3	ISM	ENSG00000151773.13	ENST00000476570.2	3467	7	-150	15316	-101	5349	5prime_fragment	FALSE	canonical	2	9	junction_1	12.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGGAAAAGAGATTACAGAC	-43879826	True	NA	5	True	AGTAAA	-17	NA	43879841	43869403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_43869490_43874841_43874928_43879630
transcript_38917.known	chr13	-	272	2	FSM	ENSG00000151773.13	ENST00000611737.1	272	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCTAAAGCCTGTTT	-43879090	True	NA	NA	False	AAAACA	-13	NA	43879727	43874752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_43874928_43879630
transcript_38919.known	chr13	+	4028	7	FSM	ENSG00000179630.11	ENST00000325686.7	4028	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	6.21825270205921	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGATTATCTCTGCCAA	43879453	True	NA	7	True	AATAAA	-20	NA	43879903	43893932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_43880120_43880951_43881548_43882184_43882364_43883770_43883937_43888756_43888983_43890113_43890275_43891448
transcript_3892.known	chr1	+	987	7	FSM	ENSG00000084623.12	ENST00000679290.1	987	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	645.557381906003	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38920.known	chr13	+	499	4	FSM	ENSG00000227258.7	ENST00000444663.6	706	4	203	4	125	-4	multi-exon	FALSE	canonical	3	12	junction_1	0.942809041582063	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCCTTTGCAGTTGCCTATT	44142293	False	NA	4	True	NA	NA	NA	44142545	44148030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44147937
transcript_38922.known	chr13	+	2277	4	FSM	ENSG00000227258.7	ENST00000659169.1	2277	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.65685424949238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAATTAAAGAAATTGAGAA	44142087	True	NA	NA	False	AATATA	-42	NA	44142339	44240492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44142697_44143556_44143738_44146781_44146856_44238827
transcript_38923.known	chr13	+	962	4	FSM	ENSG00000151778.11	ENST00000493476.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.90668171555645	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATACCATGTGTGGGTTA	44373694	True	NA	0	True	AATAAA	-15	NA	44373881	44397710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44374110_44379640_44379714_44390356_44390579_44397271
transcript_38924.known	chr13	+	802	3	FSM	ENSG00000151778.11	ENST00000379179.8	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGTGTGGGTTACAGT	44373636	True	NA	4	True	AATAAA	-19	NA	44373823	44397714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44374110_44379640_44379714_44397271
transcript_38925.known	chr13	-	978	2	FSM	ENSG00000237361.4	ENST00000432701.3	1123	2	68	77	68	-77	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTCCCAAATGTTCATT	-44405872	False	NA	NA	False	ATTAAA	-18	NA	44405885	44400249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44400956_44405613
transcript_38927.known	chr13	-	3135	3	FSM	ENSG00000102804.15	ENST00000261489.6	3135	3	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_2	163	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	-44431647	True	NA	1	True	ATTAAA	-16	NA	44436845	44432142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44434884_44436043_44436096_44436503
transcript_38928.known	chr13	-	2872	3	FSM	ENSG00000102804.15	ENST00000622051.1	2872	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	350	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCCTCATTTTAGTAA	NA	False	NA	1	True	ATTAAA	-16	NA	44437254	44432142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44434884_44436043_44436096_44437175
transcript_38929.known	chr13	+	1261	3	FSM	ENSG00000278156.2	ENST00000656799.1	1261	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATTTATTACTTTATA	44576032	False	NA	NA	False	AAGAAA	-36	NA	44576087	44579038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44576271_44577041_44577178_44578096
transcript_3893.known	chr1	+	1416	11	FSM	ENSG00000084623.12	ENST00000677378.1	1416	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	521.012667792253	2502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207676	True	NA	31	True	AATAAA	-32	NA	32222406	32231602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222540_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38931.known	chr13	-	3480	10	FSM	ENSG00000083635.8	ENST00000379161.5	3480	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_8	21.5687244996826	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGTCTTACTTTGTA	-44986360	True	NA	-4	True	ATTAAA	-15	NA	44989471	44939248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_44941323_44943441_44943675_44949721_44949839_44959380_44959575_44965843_44965937_44979189_44979267_44979889_44979953_44980721_44980821_44982071_44982155_44989024
transcript_38933.nic	chr13	-	605	2	ISM	ENSG00000083635.8	ENST00000379161.5	3480	10	-76	42824	-76	-42824	5prime_fragment	FALSE	canonical	3	140	junction_1	0	532	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATTTGAAAGATGTTCTT	-44989536	False	NA	18	True	AAAACA	-10	NA	44989547	44982072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_44982155_44989024
transcript_3894.known	chr1	+	1276	11	FSM	ENSG00000084623.12	ENST00000678689.1	1276	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	525.025561282496	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207674	True	NA	31	True	AATAAA	-32	NA	32222404	32231602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231259
transcript_38944.nic	chr13	+	1346	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-110	4186	-19	-889	5prime_fragment	FALSE	canonical	3	35	junction_8	27.0647372054487	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACAGAATATTCTATGTGC	44989497	False	NA	NA	False	CATAAA	-19	NA	44989509	45029416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_38947.nic	chr13	+	2217	9	ISM	ENSG00000133114.18	ENST00000497558.5	4294	10	-110	3315	-19	-18	5prime_fragment	FALSE	canonical	3	35	junction_8	27.0647372054487	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCAATTCTATAAGTTATA	44989497	False	NA	8	True	AATAAA	-1	NA	44989509	45030287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45029238
transcript_38948.nic	chr13	+	1541	9	NIC	ENSG00000133114.18	novel	4294	10	NA	NA	-19	-3	combination_of_known_junctions	FALSE	canonical	2	9	junction_8	34.6365053087057	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTTGTAGTATTTATTTT	44989497	False	NA	8	True	AATAAA	-18	NA	44989509	45033608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784_45028004_45033235
transcript_3895.known	chr1	+	858	9	FSM	ENSG00000084623.12	ENST00000355082.10	858	9	0	0	0	0	multi-exon	FALSE	canonical	3	1054	junction_1	220.442736328508	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTTTGTTTGTTTTTGT	32207702	True	NA	NA	False	ATTAAA	-16	NA	32222432	32229254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134
transcript_38950.known	chr13	+	3410	8	FSM	ENSG00000133114.18	ENST00000361121.6	3410	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.4570290677991	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTTGCAGATTAATC	44986911	True	NA	26	True	AATAAA	-19	NA	44989563	45030305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44989743_45004310_45004438_45006201_45006304_45008794_45008880_45014951_45015084_45015431_45015597_45020329_45020429_45027784
transcript_38958.nic	chr13	+	746	4	ISM	ENSG00000133114.18	ENST00000379151.9	3442	8	-28	21233	-19	7032	5prime_fragment	FALSE	canonical	3	88	junction_3	4.89897948556636	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGATTCTGTTAGGAAA	44989497	False	NA	NA	False	AATAAA	-15	NA	44989509	45009072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_44989743_45004304_45004438_45006201_45006304_45008794
transcript_3896.known	chr1	+	1482	10	FSM	ENSG00000084623.12	ENST00000471486.6	1482	10	0	0	0	0	multi-exon	FALSE	canonical	3	1560	junction_6	107.150983818784	2670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207706	True	NA	31	True	AATAAA	-32	NA	32222436	32231602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_38961.known	chr13	+	899	1	FSM	ENSG00000133114.18	ENST00000611650.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	51	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGTCATGCCTTTCTTT	44986876	True	NA	4	True	AATAAA	-21	NA	44989528	44990427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_44989500_44990400
transcript_38962.known	chr13	+	1280	2	FSM	ENSG00000133114.18	ENST00000473119.1	1280	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTAGTATTTATTTTTGT	NA	False	NA	11	True	AATAAA	-21	NA	45031203	45033611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45032108_45033235
transcript_3897.known	chr1	+	1343	10	FSM	ENSG00000084623.12	ENST00000677767.1	1343	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	560.866745468868	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATATTTTGTGGTGTCTGTT	32207676	True	NA	29	True	AATAAA	-30	NA	32222406	32231600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32230926_32231020_32231114
transcript_38970.known	chr13	+	2228	8	FSM	ENSG00000188342.12	ENST00000340473.8	2228	8	0	0	0	0	multi-exon	FALSE	canonical	3	434	junction_3	50.6045089545449	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTCCCATTCCCCACTCC	45116031	True	NA	9	True	AATAAA	-17	NA	45120509	45284893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232_45267377_45283441
transcript_38975.nic	chr13	+	715	7	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-59	17637	-59	-77	5prime_fragment	FALSE	canonical	3	434	junction_3	40.4255144954547	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGACGGAAAGCGAGCTCG	NA	False	NA	22	True	AAAAAG	-4	NA	45120450	45267256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870_45252971_45267232
transcript_38979.nic	chr13	+	691	6	ISM	ENSG00000188342.12	ENST00000340473.8	2228	8	-59	31923	-59	-14363	5prime_fragment	FALSE	canonical	3	434	junction_3	19.3245957266899	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTCTTCTGCTTGTCTC	NA	False	NA	NA	False	AATACA	-3	NA	45120450	45252970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_45120722_45136732_45136807_45149769_45149789_45151686_45151832_45207423_45207506_45252870
transcript_3898.known	chr1	+	1300	9	FSM	ENSG00000084623.12	ENST00000676957.1	1300	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	578.317765160297	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTCTGGTCAGATATTT	32207708	True	NA	16	True	AATAAA	-17	NA	32222438	32231587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222631_32224033_32224122_32224409_32224476_32226170_32226284_32228498_32228610_32228726_32228817_32229134_32229209_32230926_32231020_32231114
transcript_3899.known	chr1	+	1434	9	FSM	ENSG00000084623.12	ENST00000677540.1	1434	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	572.488741701529	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTTGTGGTGTCTGTTTC	32207682	True	NA	31	True	AATAAA	-32	NA	32222412	32231602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32222445_32222537_32222631_32224033_32224122_32224409_32224476_32226170_32226321_32226402_32226531_32228498_32228610_32228726_32228817_32230926
transcript_38998.known	chr13	-	4548	6	FSM	ENSG00000133112.17	ENST00000530705.6	4548	6	0	0	0	0	multi-exon	FALSE	canonical	3	3129	junction_5	544.574843341115	88660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAGCATCCTTAAGGTTAT	-45181082	True	NA	15	True	AATAAA	-30	NA	45341183	45333470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341041
transcript_39.known	ERCC-00084	+	978	1	FSM	ERCC-00084A	DQ883682	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00084_+_0_1000
transcript_3900.known	chr1	-	1169	4	FSM	ENSG00000220785.8	ENST00000403496.7	1172	4	0	3	0	0	multi-exon	FALSE	canonical	3	23	junction_2	9.93310961716756	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTGGGGTGTCAG	-32240240	False	NA	-3	True	AATAAA	-18	NA	32240422	32231659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32231970_32232041_32232185_32234951_32235114_32239868
transcript_3901.known	chr1	-	1411	4	FSM	ENSG00000160055.20	ENST00000373593.5	1411	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	12.8322510366134	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTAGTAAGTATTCTTT	-32221849	True	NA	0	True	AATAAA	-19	NA	32222343	32216196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32217352_32221130_32221198_32221866_32222019_32222306
transcript_3903.known	chr1	+	2166	13	FSM	ENSG00000182866.17	ENST00000333070.4	2166	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	56.8438406709313	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACATCTCTTTGCTGTCCA	32270764	True	NA	12	True	AATAAA	-19	NA	32274131	32286162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279580_32279748_32279840_32279995_32280078_32280211_32285513
transcript_39034.known	chr13	-	801	5	FSM	ENSG00000133112.17	ENST00000529421.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1773.83764758785	3461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGGGACTGGAATATAAAA	-45340373	False	NA	-90	True	NA	NA	NA	45340402	45337052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340351
transcript_3904.known	chr1	+	2099	13	FSM	ENSG00000182866.17	ENST00000619559.4	2099	13	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	15.5802135914613	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTCTTTGCTGTCCACT	32270743	True	NA	14	True	AATAAA	-21	NA	32274110	32286164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32274227_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_39041.known	chr13	-	1101	5	FSM	ENSG00000133112.17	ENST00000379056.5	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_4	1720.98945014198	6636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAACTTTGTCTCAGCT	-45181111	True	NA	-8	True	AATAAA	-18	NA	45341212	45336872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45341041
transcript_39042.known	chr13	-	764	6	FSM	ENSG00000133112.17	ENST00000379060.8	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1587.42054919294	14179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAATGCATTTAAACTC	-45181021	True	NA	7	True	AAGAAA	-25	NA	45341122	45337197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45337389_45338659_45338777_45339496_45339603_45339993_45340185_45340711_45340786_45341037
transcript_39043.known	chr13	-	613	5	FSM	ENSG00000133112.17	ENST00000527226.2	613	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1577.76138880377	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGGATGGTTTAGAAATGGA	-45181057	True	NA	NA	False	NA	NA	NA	45341158	45338686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45338777_45339496_45339603_45339993_45340185_45340711_45340821_45341041
transcript_39044.known	chr13	-	902	2	FSM	ENSG00000133112.17	ENST00000442760.2	902	2	0	0	0	0	multi-exon	FALSE	canonical	3	3129	junction_1	0	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAAGAAGTACATCAAAGA	-45181082	True	NA	NA	False	NA	NA	NA	45341183	45340025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45340786_45341041
transcript_39046.known	chr13	-	3663	10	FSM	ENSG00000174032.17	ENST00000519676.6	3663	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.33820475420074	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTCTGGTTATTTCAGA	-45417617	True	NA	NA	False	AATAAA	-26	NA	45418373	45393315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_45396016_45397257_45397339_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_39050.nic	chr13	-	1132	9	NIC	ENSG00000174032.17	novel	582	6	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	10.256095748383	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAACAGTGTTTATCTCCT	-45417689	True	NA	NA	False	ATTAAA	-17	NA	45418445	45397886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_45398065_45398939_45399079_45401082_45401208_45402274_45402371_45404326_45404413_45405882_45405978_45408926_45409075_45411361_45411481_45418299
transcript_39058.known	chr13	+	520	3	FSM	ENSG00000170919.16	ENST00000618947.1	520	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCATTCAGTATTTGTTTCT	45341090	True	NA	NA	False	NA	NA	NA	45341598	45360486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45341631_45344304_45344447_45360140
transcript_39060.known	chr13	+	255	2	FSM	ENSG00000136152.15	ENST00000476702.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAAATTTTCCAGTCTGTTT	45462546	False	NA	NA	False	AATAAA	-14	NA	45465063	45466624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465211_45466516
transcript_39061.known	chr13	+	531	2	FSM	ENSG00000136152.15	ENST00000617325.1	531	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCCATGGGGGTCTT	45462380	True	NA	NA	False	NA	NA	NA	45464897	45465658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465211_45465440
transcript_39062.known	chr13	+	530	1	FSM	ENSG00000136152.15	ENST00000618913.1	530	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCTCAGTACATTATTA	45465258	False	NA	5	True	AATAAA	-19	NA	45465284	45465814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465300_45465800
transcript_39063.known	chr13	+	4555	23	FSM	ENSG00000136152.15	ENST00000349995.10	4555	23	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_13	8.6945408919801	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCAGACTCACATGC	45462421	True	NA	95	True	ATTAAA	-17	NA	45464938	45536701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_45465211_45476200_45476348_45479004_45479067_45480124_45480291_45481229_45481305_45482380_45482474_45483229_45483356_45486494_45486576_45490914_45490959_45491411_45491539_45492158_45492251_45493346_45493487_45496151_45496313_45503243_45503350_45509691_45509817_45511764_45511855_45516142_45516264_45518761_45518851_45518959_45519095_45524975_45525052_45529790_45529919_45530681_45530781_45534701
transcript_39065.known	chr13	+	3509	3	FSM	ENSG00000235903.10	ENST00000606991.6	3509	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAACTGCGTCTCTGAA	46052737	True	NA	NA	False	ACTAAA	-6	NA	46052797	46101588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46052966_46094852_46095003_46098397
transcript_39067.known	chr13	+	1111	2	FSM	ENSG00000235903.10	ENST00000659168.1	1111	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCTTCTGATGTGTGACT	46052785	True	NA	NA	False	NA	NA	NA	46052845	46095843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46052966_46094852
transcript_39078.nic	chr13	-	1498	9	NIC	ENSG00000123200.17	novel	795	4	NA	NA	-19	166	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	73.6154492956472	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGTGTTCTGACTGCCC	-46046273	True	NA	3	True	TATAAA	-22	NA	46052778	46000996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_46001461_46003138_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_39081.nic	chr13	-	1237	8	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-36	48769	-23	-2071	5prime_fragment	FALSE	canonical	3	93	junction_7	40.9972622281547	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTAAAAGACAGGAT	-46046277	True	NA	NA	False	AATACA	-9	NA	46052782	46003233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_39082.nic	chr13	-	939	8	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-19	41058	-19	-2071	5prime_fragment	FALSE	canonical	3	41	junction_7	56.8718573924336	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAAGTAAAAGACAGGAT	-46046273	True	NA	NA	False	AATACA	-9	NA	46052778	46003233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_46003337_46010347_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_39086.nic	chr13	-	1332	7	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-36	55685	-23	0	5prime_fragment	FALSE	canonical	3	93	junction_6	44.2417600614322	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCTTCAGAGCTTTTT	-46046277	True	NA	NA	False	AATAAA	-23	NA	46052782	46010149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_39087.nic	chr13	-	1034	7	ISM	ENSG00000123200.17	ENST00000282007.7	6412	17	-19	47974	-19	0	5prime_fragment	FALSE	canonical	3	41	junction_6	61.4129917489415	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGCTTCAGAGCTTTTT	-46046273	True	NA	NA	False	AATAAA	-23	NA	46052778	46010149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052697
transcript_39088.nic	chr13	-	1134	7	ISM	ENSG00000123200.17	ENST00000679008.1	8024	19	-36	55883	-23	-198	5prime_fragment	FALSE	canonical	3	93	junction_6	44.2417600614322	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAGTAGGGTGATAAATAG	-46046277	True	NA	NA	False	NA	NA	NA	46052782	46010347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_46010506_46011414_46011555_46020448_46020558_46042163_46042276_46044954_46045065_46045390_46045517_46052403
transcript_39092.known	chr13	-	3643	16	FSM	ENSG00000136167.15	ENST00000323076.7	3643	16	0	0	0	0	multi-exon	TRUE	canonical	1	8	junction_13	4.2026446699932	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGTGTCTCTGGATGTTT	-46182044	True	NA	-9	True	AATAAA	-13	NA	46182177	46125922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46127724_46130813_46130939_46134126_46134251_46142291_46142426_46143289_46143405_46144441_46144521_46146907_46147104_46148351_46148448_46150935_46151079_46152779_46152946_46154804_46154887_46156437_46156571_46158521_46158652_46158825_46158990_46159598_46159687_46182110
transcript_39094.known	chr13	-	2361	15	FSM	ENSG00000102445.20	ENST00000378784.8	2361	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.473498303048	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	-46386970	True	NA	2	True	NA	NA	NA	46387233	46342963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372211_46377889_46378006_46387133
transcript_39095.nic	chr13	-	2654	14	NIC	ENSG00000102445.20	novel	11050	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_8	4.58322126454346	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTTTGCTCTGGCTTTTA	-46386992	True	NA	2	True	NA	NA	NA	46387255	46342963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46371940_46372598_46387133
transcript_39096.known	chr13	-	3206	13	FSM	ENSG00000102445.20	ENST00000378797.6	3206	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	5.46897816984327	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTTCATTCTTGCCCAT	NA	False	NA	NA	False	AATAAA	-19	NA	46387500	46341999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46343498_46344740_46344832_46345446_46345601_46349285_46349348_46350112_46350352_46356431_46356497_46359485_46359632_46361440_46361574_46362537_46362599_46363114_46363214_46368041_46368250_46368732_46368816_46387133
transcript_39098.known	chr13	+	4710	19	FSM	ENSG00000136141.15	ENST00000311191.10	4710	19	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_9	7.61253028131584	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCACTTTGTGATTGACTTA	46551923	True	NA	5	True	ATTAAA	-18	NA	46553167	46753040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46553704_46650200_46650346_46669029_46669157_46681740_46681847_46685904_46686042_46687851_46687980_46689132_46689197_46692535_46692642_46694892_46695018_46699335_46699404_46701120_46701208_46705067_46705158_46705267_46705305_46711790_46711845_46712524_46712598_46723220_46723331_46728846_46728985_46733920_46733999_46750539
transcript_39100.nic	chr13	+	1105	2	ISM	ENSG00000136141.15	ENST00000443945.6	2070	13	-35	54884	-33	-38425	5prime_fragment	FALSE	canonical	3	53	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAGAAAGCCTGGGT	46553102	True	NA	NA	False	AAAAAG	-43	NA	46553134	46650736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_46553704_46650200
transcript_39101.known	chr13	+	266	1	FSM	ENSG00000278462.1	ENST00000621879.1	266	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACATAATGTAACTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	46717422	46717688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_46717400_46717700
transcript_39105.known	chr13	-	1079	11	FSM	ENSG00000139684.15	ENST00000378697.5	1079	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.262820319459	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAACATTGGATTTTAT	-46792901	True	NA	-97	True	TATAAA	-44	NA	46797133	46771334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46790596_46790662_46791345_46791421_46793396_46793445_46797104
transcript_39112.known	chr13	-	1121	10	FSM	ENSG00000139684.15	ENST00000378720.8	1121	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	185.410056061932	3070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCTGATTTTAAAAGTTAT	-46792929	True	NA	-18	True	AATAAA	-14	NA	46797161	46771255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_46771497_46777455_46777624_46779934_46780034_46781495_46781616_46782666_46782792_46784251_46784351_46787020_46787110_46791345_46791421_46793396_46793445_46797104
transcript_3913.known	chr1	+	2091	13	FSM	ENSG00000182866.17	ENST00000336890.10	2091	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	57.0233870150368	752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCTTTGCTGTCCACTC	32251212	False	NA	15	True	AATAAA	-22	NA	32251264	32286165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32251372_32274324_32274435_32274736_32274819_32274992_32275084_32275320_32275420_32275568_32275673_32275913_32276064_32276336_32276490_32276606_32276787_32279670_32279748_32279840_32279995_32280078_32280211_32285513
transcript_39140.known	chr13	-	2111	11	FSM	ENSG00000136143.16	ENST00000646932.1	2111	11	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_1	63.9061812346818	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTCATGGCTTTTGT	-47991422	True	NA	-14	True	AATAAA	-16	NA	48001273	47942655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_39141.known	chr13	-	2321	11	FSM	ENSG00000136143.16	ENST00000646804.1	2321	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	237.469240113325	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATTTAAGTTAATAAAAA	-48037521	True	NA	7	True	AATAAA	-40	NA	48037942	47942688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48037605
transcript_39142.known	chr13	-	2201	12	FSM	ENSG00000136143.16	ENST00000643023.1	2201	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	298.799830727822	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATTTGGGTTCATGGCT	-47991454	True	NA	-19	True	AATAAA	-11	NA	48001305	47942660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47943446_47948939_47949029_47949482_47949604_47954139_47954283_47954395_47954558_47965577_47965641_47968594_47968734_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_39143.known	chr13	-	1118	6	FSM	ENSG00000136143.16	ENST00000646602.1	1118	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	309.263382895551	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGACTCATCTTTTCGT	-47991442	True	NA	NA	False	ATTAAA	-23	NA	48001293	47971452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47971884_47973263_47973393_47988540_47988704_47988881_47988982_47996842_47997024_48001179
transcript_39144.known	chr13	-	1445	4	FSM	ENSG00000136143.16	ENST00000470760.2	1445	4	0	0	0	0	multi-exon	FALSE	canonical	3	694	junction_2	53.1057644914582	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTTTGCAACTTTTAAT	-47991422	True	NA	NA	False	ATTAAA	-22	NA	48001273	47987633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_47988704_47988881_47988982_47996842_47997024_48001179
transcript_39145.known	chr13	+	552	2	FSM	ENSG00000227848.1	ENST00000423869.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGGTTTTTGAAAAGAT	48001360	True	NA	NA	False	NA	NA	NA	48001388	48002552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48001823_48002434
transcript_39147.nnic	chr13	+	723	3	NNC	ENSG00000136159.4	novel	1938	3	NA	NA	-218	-5719	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_2	249.5	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTAGTCTGAAGTATT	NA	False	NA	8	True	AATAAA	-17	NA	48037507	48041502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_48037905_48040919_48041117_48041373
transcript_39148.known	chr13	+	1938	3	FSM	ENSG00000136159.4	ENST00000258662.3	1938	3	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_2	4.5	645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTTTCATTTCTATAT	48030987	True	NA	19	True	AATAAA	-16	NA	48037725	48047221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48037905_48040919_48041117_48045659
transcript_39150.nic	chr13	+	980	2	ISM	ENSG00000136159.4	ENST00000258662.3	1938	3	-218	5719	-218	-5719	5prime_fragment	FALSE	canonical	3	506	junction_1	0	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATGTAGTCTGAAGTATT	NA	False	NA	8	True	AATAAA	-17	NA	48037507	48041502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_48037905_48040919
transcript_39158.known	chr13	-	911	8	FSM	ENSG00000136146.15	ENST00000417167.2	911	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	403.318681917505	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCCTCAAGCAGTAGTAGT	-48082258	True	NA	-69	True	AATAAA	-35	NA	48095068	48077170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48093547_48093688_48094953
transcript_3916.known	chr1	+	2118	14	FSM	ENSG00000116478.12	ENST00000373548.8	2118	14	0	0	0	0	multi-exon	TRUE	canonical	3	1040	junction_6	56.1193782519427	1822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCTGAGCTTGTTTCCT	32282665	True	NA	16	True	AATAAA	-17	NA	32292082	32333626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32292219_32302620_32302734_32316664_32316783_32324478_32324554_32326938_32327078_32327535_32327678_32329067_32329161_32330577_32330687_32330767_32330909_32331473_32331583_32331675_32331807_32332089_32332243_32332700_32332750_32333016
transcript_39162.known	chr13	-	931	7	FSM	ENSG00000136146.15	ENST00000378586.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_6	275.662686388032	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCATAGTTTTAGTTTTA	-48082321	True	NA	NA	False	ATTAAA	-35	NA	48095131	48076967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48095059
transcript_39167.known	chr13	-	2254	7	FSM	ENSG00000136146.15	ENST00000258648.7	2254	7	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_6	54.9173621604923	1031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTGTGGTATGTGCCA	-48082294	True	NA	NA	False	NA	NA	NA	48095104	48075723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48077312_48079843_48079976_48081644_48081732_48083370_48083429_48086281_48086453_48090351_48090419_48094953
transcript_39169.known	chr13	+	10089	6	FSM	ENSG00000136156.15	ENST00000647800.2	10089	6	0	0	0	0	multi-exon	FALSE	canonical	3	1335	junction_3	80.4596793431344	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGACTTTATTATTTTTG	48214176	True	NA	NA	False	AATAAA	-19	NA	48233205	48270357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48233478_48253807_48253937_48256176_48256384_48258125_48258237_48258796_48258948_48261138
transcript_39170.known	chr13	+	805	4	FSM	ENSG00000136156.15	ENST00000378549.5	805	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	645.404438231477	1045	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTCTTTCGAAGTGTG	48214173	True	NA	28	True	ATTAAA	-16	NA	48233202	48261388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48233478_48253807_48253937_48258796_48258948_48261138
transcript_39172.nic	chr13	-	501	2	ISM	ENSG00000231473.4	ENST00000433480.3	1199	3	0	5906	0	-5705	5prime_fragment	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCTCATCCTGGAGCAGC	-48303604	True	NA	NA	False	AATAAA	-24	NA	48303702	48302403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_48302493_48303290
transcript_39173.known	chr13	-	220	2	ISM	ENSG00000231473.4	ENST00000436963.2	777	3	17	5748	17	-5748	5prime_fragment	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTTTATGCTGTGAATAAA	-48303561	True	NA	NA	False	NA	NA	NA	48303659	48302446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_48302493_48303485
transcript_39174.known	chr13	+	4768	27	FSM	ENSG00000139687.16	ENST00000267163.6	4768	27	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	11.8109491875149	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGATGTTGTGTTCTT	48302594	True	NA	9	True	AATAAA	-21	NA	48303750	48481890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48304050_48307279_48307407_48342598_48342715_48345079_48345200_48347824_48347864_48348955_48349024_48360016_48360128_48362814_48362958_48364893_48364972_48367493_48367604_48368526_48368605_48373404_48373493_48376917_48377035_48379593_48379651_48380052_48380085_48380164_48380242_48381246_48381444_48452992_48453112_48456203_48456350_48459687_48459834_48463730_48463836_48464997_48465112_48465204_48465369_48473359_48473391_48476700_48476844_48477354_48477405_48479997
transcript_39175.known	chr13	-	534	2	FSM	ENSG00000139679.16	ENST00000482024.1	534	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGATTTTTGTACATT	-48412246	False	NA	NA	False	AATAAA	-16	NA	48412489	48411740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48412206_48412420
transcript_39178.known	chr13	-	3075	15	FSM	ENSG00000136161.13	ENST00000344532.8	3075	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	15.3750725898403	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATGTGTTGGGGTTTTTT	-48532085	True	NA	NA	False	AATAAA	-24	NA	48533080	48488962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48521897_48521963_48522307_48522404_48524658_48524758_48533027
transcript_39182.known	chr13	-	2984	12	FSM	ENSG00000136161.13	ENST00000544904.3	2984	12	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_11	9.34021784657551	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGAACAAATGTGTTGGG	NA	False	NA	NA	False	AATAAA	-17	NA	48533256	48488969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48490252_48496190_48496322_48499620_48499761_48501741_48501869_48502723_48502915_48510628_48510772_48511769_48511878_48512015_48512175_48512728_48512896_48515204_48515356_48515585_48515742_48533027
transcript_39192.known	chr13	-	587	1	FSM	ENSG00000274929.1	ENST00000612996.1	587	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGCTCTGGATCGTTGCT	-48531604	False	NA	NA	False	AATAAA	-19	NA	48532599	48532012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_48532000_48532600
transcript_39193.known	chr13	+	700	1	FSM	ENSG00000225131.2	ENST00000453033.1	700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACCCAGGACTAGAAGGAA	NA	False	NA	NA	False	NA	NA	NA	48771127	48771827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_48771100_48771800
transcript_39194.known	chr13	+	3386	10	FSM	ENSG00000102543.14	ENST00000251108.10	3386	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	14.8656535113996	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTAGCCTCAGAAGGTG	49247144	True	NA	3	True	AATAAA	-18	NA	49247924	49293485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489_49268060_49274290_49274341_49278349_49278520_49280508_49280699_49286221_49286283_49291683
transcript_39201.known	chr13	+	688	6	FSM	ENSG00000102543.14	ENST00000496061.5	688	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	15.5177317930167	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATAAGTTTGCTTACG	49247160	True	NA	NA	False	NA	NA	NA	49247940	49267525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49265878_49266004_49267489
transcript_39202.known	chr13	+	644	6	FSM	ENSG00000102543.14	ENST00000484126.5	644	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	16.292329483533	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTTTGTAGAGGAGACC	49247196	True	NA	NA	False	NA	NA	NA	49247976	49267657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49265878_49266004_49267489
transcript_39206.nic	chr13	+	865	5	ISM	ENSG00000102543.14	ENST00000251108.10	3386	10	-26	25700	-26	0	5prime_fragment	FALSE	canonical	3	29	junction_4	5.2618912949623	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	NA	False	NA	11	True	AATAAA	-17	NA	49247898	49267785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259345_49259524_49267489
transcript_39207.known	chr13	+	677	5	FSM	ENSG00000102543.14	ENST00000466868.1	677	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	13.8631706330118	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGGTTTCAAATGAAGA	49247166	True	NA	11	True	AATAAA	-17	NA	49247946	49267785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49248120_49248870_49248966_49255838_49255914_49259485_49259524_49267489
transcript_39211.known	chr13	-	3502	11	FSM	ENSG00000102547.19	ENST00000409308.6	3502	11	0	0	0	0	multi-exon	TRUE	canonical	2	22	junction_2	2.65518360947035	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGTTGGTTTCATTC	-49443384	True	NA	-21	True	AATAAA	-13	NA	49444064	49308649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49310994_49331946_49332091_49339676_49339743_49344178_49344239_49350743_49350913_49359713_49359833_49376966_49377132_49382799_49382942_49433317_49433394_49434085_49434224_49443985
transcript_39217.nnic	chr13	-	540	2	NNC	ENSG00000102547.19	novel	3502	11	NA	NA	-21	-40849	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGTGTAATTTTGTTCT	-49443405	True	NA	NA	False	AATAGA	-22	NA	49444085	49442344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_49442785_49443985
transcript_39219.known	chr13	+	6139	15	FSM	ENSG00000136169.17	ENST00000354234.8	6139	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	18.2432542746795	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGGATCGGCTAATTCTG	49444340	False	NA	8	True	AATAAA	-22	NA	49444373	49495003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49464020_49464057_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_39221.nic	chr13	+	3098	14	FSM	ENSG00000136169.17	ENST00000611815.2	6203	14	-48	3153	-48	-3152	multi-exon	FALSE	canonical	3	24	junction_2	12.0167535908791	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTAACTAACGCCTGTTT	49443478	True	NA	10	True	AATAAA	-23	NA	49444225	49491850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49444858_49451552_49451910_49460106_49460233_49461096_49461163_49467863_49467961_49476475_49477040_49480218_49480336_49480946_49481117_49482736_49482963_49483463_49483564_49485629_49485724_49488289_49488631_49490821_49490911_49491731
transcript_39230.known	chr13	+	1356	10	FSM	ENSG00000136147.18	ENST00000378319.8	1356	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	6.23609564462324	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACTTGTACCAAATTTG	49495399	True	NA	14	True	AATAAA	-15	NA	49495952	49528976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49496096_49506634_49506757_49513058_49513167_49518017_49518152_49520893_49520941_49522042_49522108_49523174_49523242_49524084_49524217_49526386_49526459_49528510
transcript_39231.known	chr13	-	4008	13	FSM	ENSG00000136144.12	ENST00000378302.7	4008	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_4	9.9173669220548	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATAGAGTTGTTTTTTTC	-49583382	True	NA	NA	False	AATAAA	-21	NA	49585558	49531945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49534263_49540875_49541007_49541675_49541828_49544736_49544864_49549457_49549649_49551325_49551469_49552177_49552286_49555514_49555674_49559917_49560085_49566617_49566769_49567153_49567321_49580504_49580585_49585443
transcript_39237.known	chr13	+	3552	2	FSM	ENSG00000152213.4	ENST00000282026.2	3552	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGAGGCTCATTTCCTTGC	49628454	True	NA	NA	False	NA	NA	NA	49628506	49633872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49628616_49630429
transcript_39239.nnic	chr13	-	869	5	NNC	ENSG00000123179.14	novel	967	5	NA	NA	84	0	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_2	490.382503766193	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672485	True	NA	-10	True	AATAAA	-19	NA	49691354	49660722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_49661209_49663056_49663196_49668496_49668570_49669776_49669847_49691253
transcript_39241.known	chr13	-	1026	5	FSM	ENSG00000123179.14	ENST00000495963.2	1026	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	490.081817148933	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672594	True	NA	-10	True	AATAAA	-19	NA	49691463	49660722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49686474_49686596_49691253
transcript_39244.known	chr13	-	977	4	FSM	ENSG00000123179.14	ENST00000242827.11	977	4	0	0	0	0	multi-exon	TRUE	canonical	3	943	junction_3	48.5615302705982	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCAGTGTTATATTAAT	-49672617	True	NA	-2	True	AGTAAA	-17	NA	49691486	49660673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49663056_49663196_49669776_49669847_49691253
transcript_39247.known	chr13	-	810	3	FSM	ENSG00000123179.14	ENST00000473576.6	810	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	466.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672569	True	NA	-10	True	AATAAA	-19	NA	49691438	49660722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49663056_49663196_49691253
transcript_39249.known	chr13	-	766	3	FSM	ENSG00000123179.14	ENST00000378272.9	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	438	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTGGCATTAATTGTT	-49672594	True	NA	-10	True	AATAAA	-19	NA	49691463	49660722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49669776_49669847_49691253
transcript_39250.known	chr13	-	579	2	FSM	ENSG00000123179.14	ENST00000378270.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGGTTTTAAGGCGACCAG	-49672588	True	NA	-121	True	NA	NA	NA	49691457	49660833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49661209_49691253
transcript_39251.known	chr13	-	4222	17	FSM	ENSG00000102753.10	ENST00000261667.8	4222	17	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_1	23.9686481418957	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAAAACTTATTTCTGA	-49792492	False	NA	-48	True	AATAAA	-27	NA	49792682	49699319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49701899_49702385_49702481_49705620_49705784_49706097_49706170_49706267_49706373_49709571_49709701_49710890_49711023_49719774_49719820_49721954_49722125_49722476_49722564_49725415_49725502_49732370_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_39258.nic	chr13	-	1704	6	ISM	ENSG00000102753.10	ENST00000261667.8	4222	17	-29	31935	-29	-30045	5prime_fragment	FALSE	canonical	3	223	junction_4	9.13454979733539	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACACGAAAATTAGCCA	-49792478	True	NA	NA	False	NA	NA	NA	49792711	49731254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_49732467_49732604_49732658_49732746_49732777_49732956_49733047_49746948_49746994_49792437
transcript_39271.known	chr13	-	3086	4	FSM	ENSG00000123178.15	ENST00000378195.6	3086	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	62.2735899077611	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATGATGTTATCTACCTC	NA	False	NA	-11	True	ATTAAA	-20	NA	49936490	49912705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_49915161_49921477_49921581_49927918_49928086_49936129
transcript_39278.known	chr13	-	705	6	FSM	ENSG00000231607.14	ENST00000443587.6	1734	6	19	1010	16	209	multi-exon	FALSE	canonical	1	5	junction_4	17.895250766614	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGAACCCTTTTAATGAAG	-50081035	True	NA	NA	False	NA	NA	NA	50081972	50044514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50070581_50070642_50075558_50075654_50081822
transcript_39281.known	chr13	-	569	6	FSM	ENSG00000231607.14	ENST00000659339.1	569	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	19.5591410854362	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTATTTCTCATTGAATA	-50081054	True	NA	NA	False	AAAAAG	-12	NA	50081991	50044723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50071515_50071630_50075558_50075654_50081822
transcript_39282.known	chr13	-	1737	5	FSM	ENSG00000231607.14	ENST00000458725.7	1806	5	12	57	0	13	multi-exon	FALSE	canonical	3	34	junction_1	5.59016994374947	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTATTTACTGTTTAGGTA	-50081104	True	NA	17	True	ATTAAA	-37	NA	50082041	50043491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_39288.known	chr13	-	1267	7	FSM	ENSG00000231607.14	ENST00000425586.5	1267	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	21.2974959404465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGCCTGCATGCTTGT	NA	False	NA	NA	False	AGTAAA	-18	NA	50125720	50027132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50027407_50029277_50029493_50044650_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50125301
transcript_3929.nnic	chr1	-	1322	2	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	336	junction_1	0	9647	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCTTTAATGAGTGGT	-32269765	True	NA	-10	True	AATAAA	-14	NA	32336234	32333838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_32335098_32336171
transcript_39292.known	chr13	-	1208	4	FSM	ENSG00000231607.14	ENST00000433070.7	1208	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	18.263503375737	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCCCCAGAGTTTGCCTGT	-50081086	True	NA	-9	True	ATTAAA	-33	NA	50082023	50043907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50044769_50049583_50049663_50068096_50068164_50081822
transcript_39299.known	chr13	-	855	4	FSM	ENSG00000231607.14	ENST00000449579.2	855	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	4.08248290463863	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAGCACATAATGGTTTG	-50081104	True	NA	NA	False	AATAAA	-15	NA	50082041	50049188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50049663_50068096_50068164_50075558_50075654_50081822
transcript_393.known	SIRV5	+	2029	16	FSM	SIRV5A	SIRV505	2029	16	0	0	0	0	multi-exon	FALSE	canonical	3	6503	junction_10	2237.21177063475	3105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTACCGCCAAAAAATGGG	NA	False	NA	NA	False	NA	NA	NA	1000	10991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987_2034_2119_2157_2270_2316_3298_3405_3483_3644_5380_5451_5543_5627_6111_6170_6327_6453_6826_6958_7144_7308_7681_7763_7870_8382_8454_8586_10858
transcript_3930.nnic	chr1	-	1086	2	NNC	ENSG00000175130.7	novel	1546	2	NA	NA	-1	-236	at_least_one_novel_splicesite	FALSE	canonical	3	336	junction_1	0	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTGAATCAACTGTGTC	-32269765	True	NA	-11	True	TATAAA	-26	NA	32336234	32334074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_32335098_32336171
transcript_39303.known	chr13	-	1072	7	FSM	ENSG00000231607.14	ENST00000668305.1	1072	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	19.6299091524473	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTAATGGACTTGTCTGGT	-50081066	True	NA	NA	False	ATTAAA	-16	NA	50082003	50027089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50027407_50029277_50029493_50044650_50044769_50049583_50049663_50068096_50068164_50075558_50075654_50081822
transcript_39308.known	chr13	+	1637	4	FSM	ENSG00000204977.10	ENST00000356017.8	1637	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.6640624205223	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTTCTTTTGTTAGAA	49993538	True	NA	21	True	TATAAA	-26	NA	49997036	50013180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997217_49997666_49997764_50000994_50001109_50011934
transcript_39310.known	chr13	+	2607	3	FSM	ENSG00000204977.10	ENST00000420995.6	2607	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	65	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAATATATA	49993520	True	NA	NA	False	NA	NA	NA	49997018	50014331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997132_49997666_49997764_50011934
transcript_39311.known	chr13	+	478	3	FSM	ENSG00000204977.10	ENST00000478111.5	478	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	49	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCATTTTTCTTGTTTCA	49993520	True	NA	NA	False	GATAAA	-35	NA	49997018	50020481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997132_49997666_49997764_50020213
transcript_39313.known	chr13	+	1489	3	FSM	ENSG00000204977.10	ENST00000457662.2	1489	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	71	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCAAGTATGCAGTTTT	49993560	True	NA	9	True	TATAAA	-14	NA	49997058	50013168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997217_49997666_49997764_50011934
transcript_39316.known	chr13	+	7255	2	FSM	ENSG00000204977.10	ENST00000378182.4	7255	2	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTAGTTTGGTAATTCT	49993543	True	NA	10	True	AATAAA	-17	NA	49997041	50018467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_49997764_50011934
transcript_3932.known	chr1	-	3309	11	FSM	ENSG00000160058.19	ENST00000455895.7	3309	11	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_10	20.630317496345	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCCCATCTCTACTAAAAAT	-32390784	True	NA	NA	False	NA	NA	NA	32394441	32364632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32366655_32368446_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_39321.known	chr13	+	2957	3	FSM	ENSG00000176124.15	ENST00000469754.3	2957	3	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_2	4.5	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTTTCTATTTGAAGCA	50080659	True	NA	15	True	AATAAA	-21	NA	50082168	50107218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50082558_50083141_50083195_50104703
transcript_39325.known	chr13	+	2888	2	FSM	ENSG00000176124.15	ENST00000655550.1	2888	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTGTTTCACTATTAACT	50080659	True	NA	-1	True	AATAAA	-5	NA	50082168	50107202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50082558_50104703
transcript_39326.known	chr13	-	354	1	FSM	ENSG00000223676.1	ENST00000445636.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	77	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATGAAACTTATTAACAA	NA	False	NA	NA	False	NA	NA	NA	50361763	50361409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50361400_50361800
transcript_39329.known	chr13	-	1121	2	FSM	ENSG00000186047.11	ENST00000504404.2	1121	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTGAATGAATGAGATATT	-50843449	True	NA	NA	False	ATTAAA	-22	NA	50843692	50822904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50823521_50843187
transcript_39334.known	chr13	+	1257	11	FSM	ENSG00000136104.21	ENST00000611510.5	1257	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	131.190129201857	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAATTTCATGTTCTCT	50910121	False	NA	87	True	NA	NA	NA	50910154	50956572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_50910439_50927406_50927479_50929474_50929583_50930682_50930760_50934884_50935000_50943320_50943395_50945426_50945533_50947986_50948069_50949462_50949506_50953904_50953986_50956357
transcript_39340.known	chr13	-	1007	3	FSM	ENSG00000233672.9	ENST00000454605.5	1007	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGCCTTAAAAAGGAAATT	NA	False	NA	NA	False	AATAAA	-35	NA	50910764	50882047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_50882646_50889608_50889736_50910482
transcript_3935.known	chr1	-	1630	10	FSM	ENSG00000160058.19	ENST00000373520.8	1630	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	67.0960247943936	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	-32390771	True	NA	NA	False	AATATA	-39	NA	32394428	32368032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383940_32386778_32386896_32394079_32394141_32394403
transcript_39350.known	chr13	-	800	5	FSM	ENSG00000226792.8	ENST00000433280.6	800	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	19.2921616207205	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTTGGTAGAGTTGAAA	-51171566	True	NA	NA	False	NA	NA	NA	51172388	51084080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51084326_51085318_51085560_51087927_51088076_51113192_51113223_51172252
transcript_3936.nic	chr1	-	1704	10	ISM	ENSG00000160058.19	ENST00000455895.7	3309	11	-3	3400	-3	0	5prime_fragment	FALSE	canonical	3	159	junction_9	21.5944665980506	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAAAAGAAAACAGACAT	-32390787	True	NA	NA	False	AATATA	-39	NA	32394444	32368032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32383998_32386778_32386896_32394079_32394141_32394403
transcript_39367.nnic	chr13	-	2758	4	NIC	ENSG00000226792.8	novel	3075	4	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	16.3095064303001	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAGTTGACAGATTCTTT	-51172213	False	NA	-4	True	AATAAA	-20	NA	51172414	51082118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_51084326_51085318_51085560_51087927_51088076_51172252
transcript_3937.known	chr1	-	4599	10	FSM	ENSG00000160058.19	ENST00000341071.11	4599	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_7	59.359128807956	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTTTGTCCTGAACCTTT	-32390769	True	NA	-68	True	ATTAAA	-15	NA	32394426	32365170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32368551_32376261_32376742_32377969_32378049_32378214_32378284_32378723_32378840_32381213_32381269_32383829_32384049_32386778_32386896_32394079_32394141_32394403
transcript_39375.nnic	chr13	+	1942	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	9	917	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51152841	True	NA	14	True	ATTAAA	-21	NA	51170211	51176077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172259_51172419_51174545
transcript_39379.nnic	chr13	+	639	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	31	junction_2	34	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169631	True	NA	14	True	ATTAAA	-21	NA	51170035	51176077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172316_51172400_51175948
transcript_39383.nnic	chr13	+	2061	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	22	junction_2	38.5	926	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169631	True	NA	14	True	ATTAAA	-21	NA	51170035	51176077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172316_51172419_51174545
transcript_39386.nnic	chr13	+	655	3	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	25	junction_2	37	36	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTTTCAGGTAGTT	51169631	True	NA	11	True	ATTAAA	-18	NA	51170035	51176074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51172316_51172419_51175948
transcript_39390.nnic	chr13	+	1011	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	134	junction_1	0	122	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169017	True	NA	14	True	ATTAAA	-21	NA	51169580	51176077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51175948
transcript_39392.nnic	chr13	+	845	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	0	120	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	51169638	False	NA	NA	False	AATAAA	-22	NA	51170042	51174970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51174545
transcript_39394.nnic	chr13	+	2410	2	Antisense	novelGene_ENSG00000226792.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	110	junction_1	0	1118	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTCAGGTAGTTGTT	51169021	True	NA	14	True	ATTAAA	-21	NA	51169584	51176077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_51170463_51174545
transcript_39402.nnic	chr13	-	1040	2	NNC	ENSG00000226792.8	novel	826	4	NA	NA	-43	-71133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGAGTTTCCAAAATGTA	-51172064	False	NA	-1	True	ATTAAA	-21	NA	51172265	51155256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_51156019_51171987
transcript_39407.nnic	chr13	+	1184	3	Genic_Genomic	ENSG00000274652.1	novel	790	1	NA	NA	-10113	0	multi-exon	FALSE	canonical	3	46	junction_2	44	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	51169660	False	NA	6	True	AATAAA	-14	NA	51170064	51180967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr13_+_51170463_51175948_51176044_51180276
transcript_39408.known	chr13	+	790	1	FSM	ENSG00000274652.1	ENST00000614264.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATGATGTCTCCAGA	51180165	False	NA	6	True	AATAAA	-14	NA	51180177	51180967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51180200_51181000
transcript_39409.known	chr13	-	7350	18	FSM	ENSG00000102786.15	ENST00000311234.9	7350	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_14	17.7301963212959	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGAATTATTTTTATG	-51448396	True	NA	-11	True	AATAAA	-18	NA	51453036	51361576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51365846_51367804_51367899_51368938_51369311_51374207_51374440_51374653_51374797_51376047_51376175_51378238_51378455_51379461_51379573_51382028_51382124_51383328_51383462_51383588_51383742_51387385_51387541_51389318_51389445_51395299_51395484_51430293_51430384_51451024_51451175_51451977_51452056_51452414
transcript_3941.known	chr1	-	570	3	FSM	ENSG00000160058.19	ENST00000530876.5	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	26.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGACTGCGATGTCATCACCC	-32390774	True	NA	NA	False	NA	NA	NA	32394431	32383896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32383998_32386778_32386896_32394079
transcript_39411.known	chr13	-	15428	3	FSM	ENSG00000102786.15	ENST00000442263.4	15428	3	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACACAGTCGTGTAACGGAG	-51448375	True	NA	NA	False	AATAAA	-14	NA	51453015	51436425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51451175_51451977_51452056_51452414
transcript_39414.known	chr13	+	906	2	FSM	ENSG00000236778.8	ENST00000598905.1	906	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTCCAAGGTTTCAGCTT	51453099	True	NA	NA	False	AATAAA	-30	NA	51453340	51454830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51453419_51454002
transcript_39415.known	chr13	+	698	2	FSM	ENSG00000224892.6	ENST00000596904.5	698	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTGGCAAGATTACTG	51453922	False	NA	NA	False	NA	NA	NA	51454163	51461016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51454330_51460484
transcript_39416.known	chr13	+	807	2	FSM	ENSG00000224892.6	ENST00000595905.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGGTCCCAGGGTGACAT	51453922	False	NA	NA	False	NA	NA	NA	51454163	51461312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51454330_51460671
transcript_39417.known	chr13	+	9369	12	FSM	ENSG00000139668.9	ENST00000298125.7	9369	12	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	21.6996781786701	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCGTCCCTTGGTTATGCT	51579324	True	NA	NA	False	ATTAAA	-18	NA	51584461	51767709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51584825_51660595_51660664_51675169_51675244_51703595_51703651_51719197_51719349_51727677_51727791_51739048_51739176_51751309_51751416_51755357_51755460_51756331_51756463_51758191_51758301_51759739
transcript_3942.known	chr1	+	12831	4	FSM	ENSG00000273274.2	ENST00000609129.2	12831	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.675435561221	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGATTTCTCCTTTCAGTT	32464036	True	NA	10	True	AATAAA	-20	NA	32465071	32496686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32465106_32470583_32471616_32480890_32481070_32485100
transcript_39423.known	chr13	+	6932	2	FSM	ENSG00000139668.9	ENST00000612477.1	6932	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GACAAAAATAAATAAAATAA	51579317	True	NA	NA	False	NA	NA	NA	51584454	51592586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_51584825_51586024
transcript_39432.known	chr13	-	1199	10	FSM	ENSG00000102796.12	ENST00000682342.1	1199	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	26.6791637383517	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	-51803099	True	NA	-9	True	AATAAA	-32	NA	51804162	51767994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_39439.known	chr13	-	1119	9	FSM	ENSG00000102796.12	ENST00000444610.8	1119	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_7	26.6739573366983	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGCAGCAGGTTCTTTT	-51803100	True	NA	-7	True	AATAAA	-34	NA	51804163	51767992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51768297_51769155_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_3944.nnic	chr1	+	608	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-11235	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	27.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTAGTGCTCGTTCTGT	32463992	True	NA	12	True	AATAAA	-27	NA	32465027	32485451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_3945.nnic	chr1	+	712	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-11131	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	27.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCTGATAGAGGTTGGAT	32463992	True	NA	116	True	NA	NA	NA	32465027	32485555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_39454.known	chr13	-	1970	8	FSM	ENSG00000102796.12	ENST00000218981.5	1970	8	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	26.7421550579391	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCCTGCAGCAGGTTCTT	-51803094	True	NA	-9	True	AATAAA	-32	NA	51804157	51767994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51769294_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_39457.known	chr13	-	1324	8	FSM	ENSG00000102796.12	ENST00000280056.6	1324	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.3625371685793	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATAGTACATGCCTCAT	-51803035	False	NA	-10	True	ATTAAA	-17	NA	51804098	51770783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51771496_51771820_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_39461.nic	chr13	-	957	8	NIC	ENSG00000102796.12	novel	561	5	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	36.698996260533	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	-51803120	True	NA	NA	False	AATAAA	-20	NA	51804183	51772765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_39467.known	chr13	-	671	7	FSM	ENSG00000102796.12	ENST00000490949.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	28.2174099134244	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTCATAGCCTTTAATT	-51803094	True	NA	NA	False	NA	NA	NA	51804157	51771820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_51771912_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_3947.nnic	chr1	+	1037	3	NIC	ENSG00000273274.2	novel	12831	4	NA	NA	-44	-10806	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	27.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAGAGAAACCTTCATTG	32463992	True	NA	NA	False	ATTAAA	-16	NA	32465027	32485880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32465106_32480890_32481070_32485100
transcript_39470.nic	chr13	-	874	7	NIC	ENSG00000102796.12	novel	487	4	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	38.3869190682914	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGAGATGGAGTTCTTT	-51803120	True	NA	NA	False	AATAAA	-20	NA	51804183	51772765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_51773034_51773929_51774035_51777059_51777122_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_39478.nnic	chr13	-	945	6	NNC	ENSG00000102796.12	novel	561	5	NA	NA	-24	668	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	45.5148327471386	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTTTAGTCTCCTTG	-51803124	True	NA	NA	False	ACTAAA	-18	NA	51804187	51789354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_51789774_51790010_51790093_51791164_51791258_51797825_51797909_51799533_51799668_51804053
transcript_39479.nnic	chr13	-	850	5	NNC	ENSG00000102796.12	novel	561	5	NA	NA	-12	668	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	50.1148680533033	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCTTTTAGTCTCCTTG	-51803112	True	NA	NA	False	ACTAAA	-18	NA	51804175	51789354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_51789774_51790010_51790093_51791164_51791258_51799533_51799668_51804053
transcript_39481.nic	chr13	-	488	4	ISM	ENSG00000102796.12	ENST00000682342.1	1199	10	-22	23123	-21	-1095	5prime_fragment	FALSE	canonical	3	55	junction_1	41.4835978296108	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTCTGTGGATGTGG	-51803121	True	NA	NA	False	AATAAA	-17	NA	51804184	51791117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_51791258_51797825_51797909_51799533_51799668_51804053
transcript_39482.nic	chr13	-	398	3	ISM	ENSG00000102796.12	ENST00000490949.5	671	7	-20	19297	-14	-1095	5prime_fragment	FALSE	canonical	3	53	junction_1	45	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCCGTCTGTGGATGTGG	-51803114	True	NA	NA	False	AATAAA	-17	NA	51804177	51791117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_51791258_51799533_51799668_51804053
transcript_39485.nnic	chr13	-	1979	15	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_14	51.9348591202165	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156502	True	NA	-12	True	ATTAAA	-16	NA	52159622	52132646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_39488.nnic	chr13	-	1929	14	NIC	ENSG00000136098.17	novel	2128	16	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_13	57.6321737887901	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156502	True	NA	-12	True	ATTAAA	-16	NA	52159622	52132646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52159542
transcript_39495.known	chr13	+	6504	5	FSM	ENSG00000253710.5	ENST00000679359.1	6504	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	66.8183170994301	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004717	True	NA	-29	True	NA	NA	NA	52012410	52033540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019144_52023712_52023780_52024005_52024938_52028318
transcript_39500.known	chr13	+	6454	4	FSM	ENSG00000253710.5	ENST00000681047.1	6454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	69.8760807906874	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004704	True	NA	-29	True	NA	NA	NA	52012397	52033540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019148_52024005_52024938_52028318
transcript_39502.known	chr13	+	1004	4	FSM	ENSG00000253710.5	ENST00000650049.2	1004	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	66.6049714527543	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTTTAGAAAACAGACAAAA	52004719	True	NA	68	True	NA	NA	NA	52012412	52028689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019144_52024585_52024938_52028318
transcript_39506.nic	chr13	+	1200	3	ISM	ENSG00000253710.5	ENST00000649340.2	5097	4	-14	7295	-7	-3794	5prime_fragment	FALSE	canonical	3	136	junction_1	19.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTGGTCTGCATACCATG	52004690	True	NA	25	True	AATAAA	-42	NA	52012383	52024895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_52012463_52018912_52019144_52024005
transcript_39507.known	chr13	+	5510	3	FSM	ENSG00000253710.5	ENST00000679544.1	5510	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	58.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAAGCTCCATATGCCAA	52004704	True	NA	-37	True	NA	NA	NA	52012397	52033532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019144_52028318
transcript_39511.known	chr13	+	6219	3	FSM	ENSG00000253710.5	ENST00000681053.1	6219	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004704	True	NA	-29	True	NA	NA	NA	52012397	52033540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52024005_52024938_52028318
transcript_39513.known	chr13	+	6556	4	FSM	ENSG00000253710.5	ENST00000680950.1	6556	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	73.1619208787376	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCATATGCCAATTAAAGAA	52004710	True	NA	-29	True	NA	NA	NA	52012403	52033540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012575_52018912_52019144_52024005_52024938_52028318
transcript_39514.known	chr13	+	997	3	FSM	ENSG00000253710.5	ENST00000649708.2	997	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTTTGTTTGTTTGTT	52004697	True	NA	NA	False	AATAAA	-18	NA	52012390	52054316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52018912_52019144_52053622
transcript_39515.known	chr13	+	1404	2	FSM	ENSG00000253710.5	ENST00000523764.1	1404	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATGCCAGAATGATG	52004704	True	NA	NA	False	AAGAAA	-10	NA	52012397	52029657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52028318
transcript_39518.known	chr13	+	1983	2	FSM	ENSG00000253710.5	ENST00000616513.1	1983	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGTTTTGGGTACGTCTTT	52004717	True	NA	9	True	ATTAAA	-14	NA	52012410	52017713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52012463_52015782
transcript_39520.known	chr13	-	2128	16	FSM	ENSG00000136098.17	ENST00000610828.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_6	38.7013637428393	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGTAATGTGTGCAGTTT	-52156477	True	NA	-12	True	ATTAAA	-16	NA	52159597	52132646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52133227_52133688_52133816_52135728_52135864_52136115_52136260_52136799_52136903_52141019_52141070_52143914_52143988_52144690_52144892_52148414_52148470_52151145_52151233_52151324_52151393_52152608_52152693_52153894_52153993_52154079_52154174_52156074_52156249_52159542
transcript_39524.nnic	chr13	-	816	4	NNC	ENSG00000272281.6	novel	2113	22	NA	NA	-1104	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.86744175568088	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52236384	52219343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_52219631_52223238_52223332_52227004_52227097_52236040
transcript_39526.known	chr13	-	4425	14	FSM	ENSG00000136100.14	ENST00000378060.9	4425	14	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_8	20.2121880156182	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATTTTGTGTGAGCAGTT	-52447173	True	NA	-2	True	AATAAA	-24	NA	52450634	52412605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52415924_52416016_52416094_52417056_52417142_52417991_52418057_52423573_52423640_52425931_52426067_52426988_52427067_52427186_52427220_52433661_52433749_52434792_52434883_52436289_52436405_52439097_52439169_52442376_52442446_52450498
transcript_39527.known	chr13	-	557	1	FSM	ENSG00000278238.1	ENST00000614364.1	557	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	120	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTTGTGTTTGTGTGGTT	-52455224	True	NA	-1	True	GATAAA	-18	NA	52455331	52454774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52454800_52455300
transcript_39529.known	chr13	+	3614	9	FSM	ENSG00000136108.15	ENST00000258607.10	3614	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	62.6039136156838	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCAGCTTTTTAATATCT	52448065	True	NA	21	True	AATAAA	-18	NA	52455477	52476627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_39535.known	chr13	+	1972	6	FSM	ENSG00000136108.15	ENST00000378034.7	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_2	48.2012447972041	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAAGCTCTCTTGGTTTTGT	52448026	True	NA	9	True	ATTAAA	-19	NA	52455438	52465843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52455627_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294
transcript_39540.known	chr13	+	3395	9	FSM	ENSG00000136108.15	ENST00000490903.5	3395	9	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	196.390196738534	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTTTTAATGAAGTTTATT	52448559	False	NA	10	True	ATTAAA	-15	NA	52455971	52476349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52456180_52456522_52456608_52460898_52460975_52461057_52461927_52462362_52462568_52465294_52465466_52468277_52468348_52473828_52474085_52474894
transcript_39541.known	chr13	+	579	3	FSM	ENSG00000136108.15	ENST00000468284.1	579	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	330	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTATCGTGGCCAGATTG	52455402	False	NA	NA	False	AAGAAA	-12	NA	52455428	52461353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52455627_52456522_52456608_52461057
transcript_39545.nic	chr13	+	927	6	NIC	ENSG00000244471.6	novel	865	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	6.51152823843988	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570143	52587095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52584632_52584704_52586809
transcript_39547.nnic	chr13	+	856	5	NIC	ENSG00000244471.6	novel	865	4	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_4	6.41774882649672	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCAGGTTTTTTTTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52570143	52587095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_52570467_52571231_52571294_52579343_52579436_52583095_52583189_52586809
transcript_39554.nic	chr13	+	2259	6	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-41	23	combination_of_known_junctions	FALSE	canonical	3	14	junction_5	31.2409987036266	54229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTTGGTGGAATCCGTA	52615510	True	NA	5	True	AATAAA	-20	NA	52617483	52643796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642368
transcript_39555.known	chr13	+	2158	6	FSM	ENSG00000273784.5	ENST00000683187.1	2158	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	21.1660104885167	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615551	True	NA	-18	True	NA	NA	NA	52617524	52643773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52617683_52621988_52622265_52627437_52627579_52632421_52632495_52637304_52637447_52642405
transcript_39557.nnic	chr13	+	1313	5	NNC	ENSG00000250299.6	novel	926	6	NA	NA	-71	-5386	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	43.3532005738907	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGACTCTTTTTAA	52615513	True	NA	NA	False	ATTAAA	-28	NA	52617486	52631982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52629218_52629360_52631423
transcript_39560.nic	chr13	+	2126	5	NIC	ENSG00000273784.5	novel	2158	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_3	38.5835133185147	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	52615510	True	NA	-18	True	NA	NA	NA	52617483	52643773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_52617683_52621988_52622265_52627437_52627579_52637304_52637447_52642405
transcript_39562.nnic	chr13	+	2050	4	NNC	ENSG00000273784.5	novel	2158	6	NA	NA	-41	-10519	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	46.089285329914	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGACTCTTTTTAA	52615510	True	NA	NA	False	ATTAAA	-28	NA	52617483	52631982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_52617683_52621988_52622265_52627437_52627579_52630548
transcript_39566.known	chr13	+	1343	1	FSM	ENSG00000139675.13	ENST00000357495.5	1343	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27951	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAATGTCTCTAAAAAAAAA	NA	False	NA	-18	True	NA	NA	NA	52642430	52643773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52642400_52643800
transcript_39567.known	chr13	-	975	1	FSM	ENSG00000273723.1	ENST00000620372.1	975	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	67	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTTGTCTTGGTCATAA	-52651973	True	NA	NA	False	AATAAA	-16	NA	52652279	52651304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52651300_52652300
transcript_39571.known	chr13	+	1217	14	FSM	ENSG00000165416.15	ENST00000343788.10	1217	14	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	146.118295271392	3567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAATGCCCATTGTGTATT	52648439	True	NA	26	True	AATAAA	-33	NA	52652838	52687872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52661474_52661571_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_39572.known	chr13	+	14161	13	FSM	ENSG00000165416.15	ENST00000310528.9	14161	13	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_5	52.1111925490953	2885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTGGGTTAAGTGG	52648436	True	NA	NA	False	AATAAA	-16	NA	52652835	52700909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_52652959_52653045_52653104_52657531_52657623_52658398_52658469_52659178_52659250_52662648_52662703_52663095_52663113_52664034_52664058_52665636_52665734_52666811_52666920_52676229_52676321_52679973_52680156_52687733
transcript_39586.known	chr13	-	1444	7	FSM	ENSG00000136110.13	ENST00000448904.6	1444	7	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	329.912109507972	1803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAATTGTACACTTGAGC	-52730507	True	NA	-10	True	AATAAA	-27	NA	52739812	52703263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52703808_52708535_52708703_52712715_52712870_52723996_52724111_52733218_52733360_52739030_52739172_52739629
transcript_39587.known	chr13	-	731	4	FSM	ENSG00000136110.13	ENST00000431550.1	731	4	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_2	138.715536260363	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACATTTTAAATTATCTT	-52739321	False	NA	0	True	NA	NA	NA	52739352	52712715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_52712870_52723996_52724111_52733218_52733360_52739030
transcript_39618.known	chr13	-	1030	4	FSM	ENSG00000234787.8	ENST00000427299.6	1030	4	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_1	1612.78826880654	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTCAGGTTCTCTTTG	-54118091	True	NA	0	True	ATTAAA	-18	NA	54132862	54124323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54124756_54127279_54127430_54130873_54131072_54132612
transcript_39619.known	chr13	-	1060	5	FSM	ENSG00000234787.8	ENST00000423442.6	1060	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	339.928668988069	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCGTGGCCTCTGCTCTGA	-54118095	True	NA	-3	True	CATAAA	-23	NA	54132866	54115782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54116210_54120939_54121045_54125148_54125273_54127279_54127430_54132612
transcript_39620.known	chr13	-	833	4	FSM	ENSG00000234787.8	ENST00000606706.5	833	4	0	0	0	0	multi-exon	FALSE	canonical	3	758	junction_1	1410.41042096106	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTAGGTTTGTTTATAC	-54118048	True	NA	NA	False	NA	NA	NA	54132819	54124994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54125273_54127279_54127430_54130873_54131072_54132612
transcript_39621.known	chr13	-	1020	3	FSM	ENSG00000234787.8	ENST00000451744.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	3	3573	junction_2	163.5	696	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATGGTGTTTTAGAGTT	-54118095	True	NA	NA	False	AATAAA	-26	NA	54132866	54126861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54127430_54130873_54131072_54132612
transcript_3963.known	chr1	-	766	6	FSM	ENSG00000176261.16	ENST00000373506.8	766	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	313.148527060243	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTAGGTGTGCCTCATGCC	-32638477	True	NA	NA	False	NA	NA	NA	32650554	32621603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32650428
transcript_39649.nnic	chr13	+	1347	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	1.5	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGGGTGACTGTTAT	54267334	True	NA	10	True	CATAAA	-20	NA	54268485	54342277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335030_54335144_54341965
transcript_3965.known	chr1	-	548	6	FSM	ENSG00000176261.16	ENST00000465588.2	548	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	318.795608501748	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAAAATAAAAGACTCCT	-32638448	True	NA	-34	True	AATGAA	-41	NA	32650525	32621857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32650401
transcript_39651.nnic	chr13	+	1511	3	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	48	junction_1	20.5	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267334	True	NA	10	True	AATAAA	-25	NA	54268485	54353580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54335030_54335144_54353104
transcript_39659.nnic	chr13	+	1234	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCTGGGTGACTGTTAT	54267334	True	NA	10	True	CATAAA	-20	NA	54268485	54342277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54341965
transcript_39661.nnic	chr13	+	1398	2	Antisense	novelGene_ENSG00000283126.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	67	junction_1	0	176	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGTGTATAGTTCAAACG	54267334	True	NA	10	True	AATAAA	-25	NA	54268485	54353580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_+_54269408_54353104
transcript_39664.known	chr13	-	612	1	FSM	ENSG00000136149.6	ENST00000484130.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1657	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCCAATAAAGACTGTTAAT	NA	False	NA	NA	False	AATACA	-36	NA	54441315	54440703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_54440700_54441300
transcript_39667.nnic	chr13	+	994	3	NNC	ENSG00000287460.1	novel	2023	3	NA	NA	-166	6414	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	4	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTGTATTATTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	54572187	54600579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_54572380_54581570_54581772_54599978
transcript_39669.nnic	chr13	+	902	3	NNC	ENSG00000287460.1	novel	2023	3	NA	NA	-122	6414	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	3.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGTGTATTATTTTGC	54571589	True	NA	NA	False	AATAAA	-17	NA	54572231	54600579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_54572332_54581570_54581772_54599978
transcript_39674.known	chr13	+	906	5	FSM	ENSG00000277047.5	ENST00000616396.2	906	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCTTGTTTTTACTGT	NA	False	NA	NA	False	AATAAA	-21	NA	54941890	54986719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_54942056_54952300_54952394_54979309_54979392_54980380_54980447_54986219
transcript_39694.nnic	chr13	+	1347	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23268	-87093	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	2.5	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTAGCCA	55037463	True	NA	NA	False	AATACA	-10	NA	55039676	55074397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039846_55062871_55063003_55073350
transcript_39701.nnic	chr13	+	493	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23152	-87867	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	14.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTGCCTTGTTCTTT	55037579	True	NA	NA	False	NA	NA	NA	55039792	55073623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_39702.nnic	chr13	+	634	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-87781	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	14.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTCTTCTGTCTGACAGT	55037524	True	NA	NA	False	NA	NA	NA	55039737	55073709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_39703.nnic	chr13	+	1322	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-87093	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	14.5	111	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTTAGCCA	55037524	True	NA	NA	False	AATACA	-10	NA	55039737	55074397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55073350
transcript_39705.nnic	chr13	+	563	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-82382	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	20	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCTCCTTTTCCTTTGAT	55037524	True	NA	NA	False	AATAAA	-17	NA	55039737	55079108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55078820
transcript_39707.nnic	chr13	+	374	3	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-57887	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	21.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGGCATTCATATTTTAAT	55037524	True	NA	NA	False	AATAAA	-22	NA	55039737	55103603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871_55063003_55103504
transcript_39714.nnic	chr13	+	441	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23203	-98282	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCTATTATTTCAAAAAAATT	55037528	True	NA	NA	False	AATAAA	-21	NA	55039741	55063208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039846_55062871
transcript_39715.nnic	chr13	+	499	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-98264	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTGCACTTGCTTTATC	55037524	True	NA	NA	False	AATAAA	-39	NA	55039737	55063226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871
transcript_39716.nnic	chr13	+	1040	2	NNC	ENSG00000278630.1	novel	659	3	NA	NA	-23207	-97723	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACCTATAATGAGAAGGTG	55037524	True	NA	NA	False	NA	NA	NA	55039737	55063767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_55039882_55062871
transcript_39764.nnic	chr13	-	1257	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-218	-18443	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	19	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCTTTTTTTTTTTTTC	-55583693	False	NA	2	True	ATTAAA	-22	NA	55583742	55554139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55554985_55581427_55581587_55583489
transcript_39773.nnic	chr13	-	851	3	NNC	ENSG00000274090.1	novel	809	3	NA	NA	-295	-42567	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	57	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	NA	False	ATTAAA	-21	NA	55583819	55578263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_55578626_55581427_55581587_55583489
transcript_3978.known	chr1	+	7077	5	FSM	ENSG00000160062.15	ENST00000373510.9	7077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.54950975679639	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGACTTTAGTTATGTCAC	32538571	True	NA	12	True	AATAAA	-15	NA	32539426	32605941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600086
transcript_39784.known	chr13	-	4745	28	FSM	ENSG00000139734.19	ENST00000400324.9	4745	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.3484809374068	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTCTTTTGTCTCTCTT	-60159077	True	NA	NA	False	AATAAA	-29	NA	60163928	59665582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_59666847_59774188_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39785.known	chr13	-	3449	27	FSM	ENSG00000139734.19	ENST00000267215.8	3449	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	29.9039141725667	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATTTGCTATGAGATTGC	-60163750	False	NA	NA	False	AGTAAA	-15	NA	60163766	59774058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_59774249_59774727_59774824_59810787_59810924_59833106_59833272_59839323_59839449_59861406_59861537_59879228_59879469_59911734_59911837_59916154_59916250_59924774_59924871_59969943_59970059_59970851_59971161_59974351_59974457_59980794_59980860_59983768_59983888_59991157_59991275_59992067_59992187_59992472_59992584_60008543_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_3979.known	chr1	+	1943	5	FSM	ENSG00000160062.15	ENST00000316459.4	1943	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	5.52268050859363	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGAAATCATTCATATT	32538573	True	NA	NA	False	ACTAAA	-2	NA	32539428	32600990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32539573_32553458_32553541_32592930_32593755_32595053_32595224_32600267
transcript_39790.nic	chr13	-	1154	9	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-196	234541	-34	-147346	5prime_fragment	FALSE	canonical	3	110	junction_6	12.9367451470608	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGACAGATTTTTTTGTATT	-60159111	True	NA	NA	False	AAGAAA	-7	NA	60163962	60008599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_60008650_60010532_60010670_60015912_60015983_60016070_60016146_60042689_60042821_60093627_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39791.nic	chr13	-	873	4	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-196	319387	-34	-232192	5prime_fragment	FALSE	canonical	3	110	junction_1	8.52447456836295	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGCTGCTTCTGTTT	-60159111	True	NA	NA	False	ATTAAA	-20	NA	60163962	60093445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39792.nic	chr13	-	656	4	ISM	ENSG00000139734.19	ENST00000267215.8	3449	27	-196	319604	-34	-232409	5prime_fragment	FALSE	canonical	3	110	junction_1	8.52447456836295	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTGATGCAGTACATTAAT	-60159111	True	NA	NA	False	GATAAA	-44	NA	60163962	60093662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_60093733_60112009_60112187_60132956_60132990_60163586
transcript_39797.known	chr13	+	3019	14	FSM	ENSG00000083544.16	ENST00000196169.7	3019	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	16.2880869087787	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTGTTTTATTTGCCT	60396422	True	NA	27	True	AATAAA	-23	NA	60396456	60573878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573612
transcript_39798.known	chr13	+	2484	14	FSM	ENSG00000083544.16	ENST00000377894.6	2484	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	15.9800171071736	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGTGTTTTATTTGCC	60396656	True	NA	26	True	AATAAA	-22	NA	60396987	60573877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60397011_60439687_60439773_60444686_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_39800.known	chr13	+	2645	14	FSM	ENSG00000083544.16	ENST00000377881.8	2645	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_8	7.94209815331711	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTGTGTGTTTTA	60396636	True	NA	20	True	AATAAA	-16	NA	60397219	60573871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379_60460541_60467237_60467380_60483774_60483847_60485798_60485949_60494434_60494576_60509762_60509920_60510629_60510756_60528366_60529218_60535107_60535234_60567524_60567651_60573615
transcript_39803.nic	chr13	+	893	4	NIC	ENSG00000083544.16	novel	3019	14	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	18.8561808316413	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGTATATAGTTACTTC	60396895	False	NA	NA	False	AATAAA	-17	NA	60396929	60461040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_60397011_60439687_60439773_60444682_60444749_60460379
transcript_39805.nic	chr13	+	1257	4	ISM	ENSG00000083544.16	ENST00000377881.8	2645	14	-259	112831	22	0	5prime_fragment	FALSE	canonical	3	44	junction_1	3.29983164553722	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGTATATAGTTACTTC	60396950	False	NA	NA	False	AATAAA	-17	NA	60396960	60461040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_60397406_60439687_60439773_60444682_60444749_60460379
transcript_39806.nnic	chr13	-	790	4	Antisense	novelGene_ENSG00000083544.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	2.35702260395516	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTATATTCTTCTCG	-60583640	False	NA	NA	False	AATAAA	-18	NA	60583702	60554766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_-_60555130_60563102_60563201_60573197_60573335_60583510
transcript_39809.nnic	chr13	-	803	3	Antisense	novelGene_ENSG00000083544.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACGCAGTCTCAGGTAGTA	-60583640	False	NA	NA	False	AATAAA	-1	NA	60583702	60551714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_-_60552189_60573197_60573335_60583510
transcript_39811.nnic	chr13	-	692	3	Antisense	novelGene_ENSG00000083544.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTTATATTCTTCTCG	-60583640	False	NA	NA	False	AATAAA	-18	NA	60583702	60554766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr13_-_60555130_60573197_60573335_60583510
transcript_39817.known	chr13	+	723	2	FSM	ENSG00000083544.16	ENST00000463109.2	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAAGTATATAGTTACTTC	NA	False	NA	NA	False	AATAAA	-17	NA	60444686	60461040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_60444749_60460379
transcript_39823.known	chr13	-	2231	3	FSM	ENSG00000204899.6	ENST00000377818.4	2231	3	0	0	0	0	multi-exon	FALSE	canonical	3	648	junction_1	22.5	759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGCCTGTACTTTTGTTTT	-72719985	True	NA	-10	True	AATAAA	-16	NA	72727629	72708366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_72710346_72718951_72719098_72727523
transcript_39828.nic	chr13	-	509	2	ISM	ENSG00000204899.6	ENST00000377818.4	2231	3	-204	10532	-204	-10532	5prime_fragment	FALSE	canonical	3	693	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTAATGATGAAGTTATG	NA	False	NA	-5	True	AATAAA	-21	NA	72727833	72718898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_72719098_72727523
transcript_39834.known	chr13	+	2760	12	FSM	ENSG00000136122.18	ENST00000390667.11	2760	12	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	14.2411346933934	164	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCATTTTCTTCTTTCC	72726149	True	NA	NA	False	AATAAA	-16	NA	72727922	72756196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_72728008_72728925_72729094_72731280_72731388_72734959_72735006_72737961_72738044_72743536_72743603_72744504_72744562_72744980_72745208_72745943_72746077_72746500_72747112_72753689_72753822_72755150
transcript_39835.known	chr13	-	5232	21	FSM	ENSG00000083520.15	ENST00000377780.8	5232	21	0	0	0	0	multi-exon	FALSE	canonical	2	41	junction_19	61.5454913052126	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-72776332	True	NA	NA	False	NA	NA	NA	72781925	72757442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72781288_72781357_72781604
transcript_39836.known	chr13	-	10571	21	FSM	ENSG00000083520.15	ENST00000377767.9	10571	21	0	0	0	0	multi-exon	FALSE	canonical	2	127	junction_16	33.1995481896968	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGTTCTAATTGCAAACT	-72776307	True	NA	-4	True	AATAAA	-17	NA	72781900	72752168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_72759879_72760528_72760652_72761362_72761522_72761645_72761815_72761922_72762138_72763450_72763608_72765971_72766059_72768784_72768913_72770903_72770989_72771080_72771146_72771794_72771897_72772158_72772276_72772692_72772840_72773683_72773822_72773945_72774060_72775210_72775376_72775924_72776093_72777419_72777494_72778186_72778381_72780845_72781004_72781604
transcript_39839.known	chr13	+	3080	18	FSM	ENSG00000083535.16	ENST00000326291.11	3080	18	0	0	0	0	multi-exon	TRUE	canonical	1	20	junction_8	16.5169515523088	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGGAAAGTCTGTTGC	72779525	True	NA	NA	False	AATAAA	-41	NA	72782132	73016461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_72782350_72783422_72783722_72792446_72792548_72795358_72795558_72797906_72798027_72821848_72821983_72827009_72827119_72827732_72827915_72835242_72835369_72854056_72854156_72893783_72893950_72908530_72908682_72917075_72917167_72931164_72931268_72965273_72965405_72973590_72973676_72998821_72998996_73015868
transcript_39845.nic	chr13	+	1087	2	ISM	ENSG00000083535.16	ENST00000617689.4	2882	16	-7	189959	0	-13734	5prime_fragment	FALSE	canonical	3	63	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTAGCCAGCCATGATG	72779525	True	NA	NA	False	NA	NA	NA	72782132	72784292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_72782350_72783422
transcript_39847.known	chr13	-	10832	8	FSM	ENSG00000118922.18	ENST00000377669.7	10832	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.9583319662269	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCTAACTGACTCAGACA	-74133883	False	NA	-10	True	AATAAA	-21	NA	74133929	73686088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_73695672_73715367_73715526_73764937_73765001_73813151_73813288_73845826_73846374_73943980_73944071_73994989_73995054_74133738
transcript_39855.known	chr13	-	580	4	FSM	ENSG00000188243.14	ENST00000377612.8	580	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1078.57354356988	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	NA	False	NA	-21	True	AATAAA	-18	NA	75538802	75526435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530260_75537740_75537921_75538752
transcript_39857.known	chr13	-	463	3	FSM	ENSG00000188243.14	ENST00000460675.5	463	3	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	1137.5	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75549341	True	NA	-21	True	AATAAA	-18	NA	75549428	75526435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530267_75549322
transcript_39860.known	chr13	-	1669	4	FSM	ENSG00000188243.14	ENST00000682242.1	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2167	junction_2	49.4660377318508	9330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTTTTGAATTTAAAAAGC	-75511805	True	NA	NA	False	AATAAA	-17	NA	75537841	75525213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530267_75537663_75537676_75537763
transcript_39861.known	chr13	-	392	4	FSM	ENSG00000188243.14	ENST00000497707.5	392	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1034.28762386915	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530310_75530409_75537663_75537676_75537763
transcript_39862.known	chr13	-	486	5	FSM	ENSG00000188243.14	ENST00000355801.4	486	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1095.24883017513	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511805	True	NA	-21	True	AATAAA	-18	NA	75537841	75526435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75527812_75527852_75530113_75530267_75537663_75537676_75537763
transcript_39863.known	chr13	-	374	4	FSM	ENSG00000188243.14	ENST00000486516.5	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1032.33403293486	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511790	True	NA	-21	True	AATAAA	-18	NA	75537826	75526435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530310_75530406_75537663_75537676_75537763
transcript_39864.known	chr13	-	594	3	FSM	ENSG00000188243.14	ENST00000377619.9	594	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	1113.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGTGGTGATGAATG	-75511582	False	NA	-21	True	AATAAA	-18	NA	75537618	75526435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_75526640_75530113_75530267_75537381
transcript_39865.nnic	chr13	+	822	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	2	15	junction_7	612.555236992834	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	75540940	True	NA	6	True	ATTAAA	-17	NA	75549753	75605933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75605728
transcript_39866.nnic	chr13	+	805	8	NIC	ENSG00000118939.18	novel	931	9	NA	NA	-37	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_6	602.304350484242	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	75540940	True	NA	6	True	ATTAAA	-17	NA	75549753	75605933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75604768_75604828_75605728
transcript_39882.nic	chr13	+	976	9	NIC	ENSG00000118939.18	novel	1050	8	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	126	junction_1	547.947519727026	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTTAACCTGTGTTT	NA	False	NA	6	True	ATTAAA	-17	NA	75549466	75605933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_39886.known	chr13	+	931	9	FSM	ENSG00000118939.18	ENST00000377595.8	931	9	0	0	0	0	multi-exon	FALSE	canonical	3	1415	junction_1	137.923665482034	2492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAAACTAGCAATAG	75540977	True	NA	93	True	NA	NA	NA	75549790	75606020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75549863_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_39893.known	chr13	+	1050	8	FSM	ENSG00000118939.18	ENST00000618773.4	1050	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	627.404273534202	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTGAAAACTAGCAATAG	NA	False	NA	93	True	NA	NA	NA	75549479	75606020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75549683_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914_75594991_75604768_75604828_75605728
transcript_39898.known	chr13	+	696	7	FSM	ENSG00000118939.18	ENST00000471792.6	696	7	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	620.024103474122	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGAACTATTTTAATTTG	NA	False	NA	NA	False	NA	NA	NA	75549482	75594990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_75549671_75549975_75549988_75560752_75560882_75566694_75566852_75567226_75567313_75569459_75569508_75594914
transcript_39903.known	chr13	+	1863	5	FSM	ENSG00000283208.2	ENST00000638147.2	1863	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.5184491393263	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGAAATGACCTGGCGAT	76990604	True	NA	NA	False	AATAAA	-25	NA	76992077	77078025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77075517_77075585_77076815
transcript_39906.known	chr13	+	2683	5	FSM	ENSG00000102805.16	ENST00000636780.2	2683	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	51.5285115251741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTGTTGGGTCTAAT	76990570	True	NA	-26	True	TATAAA	-19	NA	76992043	77002477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_76998042_76998086_77000457
transcript_39910.known	chr13	+	604	4	FSM	ENSG00000102805.16	ENST00000635989.1	604	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	50.2195181179589	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTAGTTCAAGTAGCAAC	76990615	True	NA	NA	False	NA	NA	NA	76992088	76996099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995456_76995514_76995901
transcript_39911.known	chr13	+	2517	4	FSM	ENSG00000102805.16	ENST00000635915.1	2517	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.3417258586207	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTCTGTGAGGAAATAAGT	76990686	True	NA	-92	True	NA	NA	NA	76992159	77002411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995842_76996128_77000457
transcript_39912.known	chr13	+	5243	4	FSM	ENSG00000102805.16	ENST00000377453.9	5243	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	16.4991582276861	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTAACCTTGTATCTTCA	76990607	True	NA	NA	False	AATAGA	-8	NA	76992080	77005117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901_76996128_77000457
transcript_39916.known	chr13	+	2341	3	FSM	ENSG00000102805.16	ENST00000485938.4	2341	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	7.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTAAAGGATATGTTAAC	76990585	True	NA	NA	False	ATTAAA	-45	NA	76992058	76997863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_76992272_76995062_76995229_76995901
transcript_39921.known	chr13	-	2555	8	FSM	ENSG00000136160.17	ENST00000475537.2	2555	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	460.511029361149	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATACTATCTACAATTTTTT	-77919359	False	NA	-59	True	NA	NA	NA	77919390	77897349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919065
transcript_39922.known	chr13	-	4471	8	FSM	ENSG00000136160.17	ENST00000377211.8	4471	8	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_7	418.471611696562	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTGTGTGTTTCATTG	NA	False	NA	0	True	ATTAAA	-24	NA	77919768	77895480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919396
transcript_39925.known	chr13	-	4445	8	FSM	ENSG00000136160.17	ENST00000646605.1	4445	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_7	459.750464704407	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATGAAGTTATTCAATTA	-77919366	False	NA	-45	True	AATATA	-14	NA	77919397	77895525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090_77918625_77919006
transcript_39930.known	chr13	-	4300	7	FSM	ENSG00000136160.17	ENST00000646607.2	4300	7	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_6	342.568930614296	1192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGGACTGTGTGTT	-77913091	True	NA	-6	True	ATTAAA	-18	NA	77918831	77895486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_77898335_77899858_77899968_77900520_77900655_77901057_77901208_77903155_77903361_77903494_77903608_77918090
transcript_39932.known	chr13	-	3507	6	FSM	ENSG00000152193.8	ENST00000282003.7	3507	6	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	20.0259831219344	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTTGATGTCGATGATGA	-78655358	True	NA	-13	True	AATAAA	-20	NA	78659155	78614288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_78617123_78635109_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_39937.nic	chr13	-	713	5	ISM	ENSG00000152193.8	ENST00000282003.7	3507	6	-40	20821	-40	-20821	5prime_fragment	FALSE	canonical	3	177	junction_3	19.8871818013513	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTATTTTGCTCCCAGA	-78655398	True	NA	4	True	NA	NA	NA	78659195	78635109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_78635199_78638822_78639072_78642121_78642214_78644861_78644998_78659048
transcript_39944.known	chr13	+	2427	7	FSM	ENSG00000227354.7	ENST00000606049.1	2427	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	6.41396046829795	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAGAAAAAGGAAAAAAAAAA	79406067	False	NA	NA	False	AAGAAA	-42	NA	79406347	79424328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79412681_79412908_79415261_79415365_79417834_79417917_79420759_79420816_79421986_79422215_79422726
transcript_39959.known	chr13	+	2359	4	FSM	ENSG00000227354.7	ENST00000654024.1	2359	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	6.94422221866655	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGGTACATAGTGAATACAA	79406012	True	NA	NA	False	NA	NA	NA	79406292	79424022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79417834_79417917_79420759_79420816_79421986
transcript_39969.known	chr13	+	1502	5	FSM	ENSG00000227354.7	ENST00000656910.1	1502	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.74536878161602	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCGGAAATGATTTTGAAAA	79406020	True	NA	3	True	AATAAA	-15	NA	79406300	79422947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79406478_79412681_79412908_79417834_79417917_79420759_79420816_79421986
transcript_39970.known	chr13	-	514	2	FSM	ENSG00000139746.16	ENST00000461008.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTATAATTGTTTTTTAA	-79366690	False	NA	NA	False	ATTAAA	-16	NA	79366710	79365759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_79366196_79366632
transcript_39980.known	chr13	+	2324	8	FSM	ENSG00000102471.15	ENST00000620924.1	2324	8	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_7	15.7519030272406	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTTTGTTTTGTCTCATT	79481248	False	NA	77	True	AATAAA	-27	NA	79481473	79554096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543557_79543683_79548327_79548395_79551016_79551123_79552515
transcript_39984.known	chr13	+	1384	8	FSM	ENSG00000102471.15	ENST00000487865.5	1384	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	104.006083024612	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACATATATATACACACAC	79481227	True	NA	NA	False	AATATA	-16	NA	79481452	79553195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79543617_79543683_79548327_79548395_79551016_79551123_79552515
transcript_39986.known	chr13	+	698	7	FSM	ENSG00000102471.15	ENST00000465762.5	698	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	109.315547333803	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAACTTTAATAGAAGACTA	79481231	True	NA	-29	True	NA	NA	NA	79481456	79552578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_79481525_79520809_79520976_79533322_79533457_79539681_79539776_79548327_79548395_79551016_79551123_79552515
transcript_39989.known	chr13	-	2286	2	FSM	ENSG00000136158.12	ENST00000377104.4	2286	2	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGCTGTTTTGTCTTCTT	-80337730	True	NA	-22	True	ATTAAA	-1	NA	80341126	80335975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_80337757_80340621
transcript_39990.known	chr13	+	1162	1	FSM	ENSG00000214182.5	ENST00000607242.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2823	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTTCTAAAAAAAAAAAAAA	81689834	False	NA	-14	True	AATAAA	-23	NA	81689910	81691072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_81689900_81691100
transcript_39991.known	chr13	+	792	5	FSM	ENSG00000183098.11	ENST00000617456.1	792	5	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	4.94974746830583	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGGTTTTTGGTCAGAT	NA	False	NA	NA	False	NA	NA	NA	94286347	94403217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_94286480_94305979_94306124_94382413_94382551_94398465_94398642_94403014
transcript_39995.known	chr13	-	706	1	FSM	ENSG00000278177.1	ENST00000610286.1	706	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAATTTTAAGTCATTAAC	-93227301	False	NA	-17	True	AATAAA	-17	NA	93227317	93226611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_93226600_93227300
transcript_39998.nic	chr13	-	1992	12	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_11	45.4792660051109	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593434	True	NA	NA	False	AATAAA	-17	NA	94596271	94574053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94595974
transcript_39999.known	chr13	-	1797	12	FSM	ENSG00000088451.11	ENST00000261296.7	1797	12	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_11	20.3571418214959	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593315	True	NA	NA	False	AATAAA	-17	NA	94596152	94574053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596050
transcript_4.known	ERCC-00004	+	507	1	FSM	ERCC-00004A	DQ516752	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17207	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	GATAAA	-39	NA	0	507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00004_+_0_500
transcript_40.known	ERCC-00085	+	828	1	FSM	ERCC-00085A	DQ883669	828	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00085_+_0_800
transcript_40000.nnic	chr13	-	1834	12	NNC	ENSG00000088451.11	novel	1797	12	NA	NA	-58	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_11	46.0154483581689	217	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	-94593463	True	NA	NA	False	AATAAA	-17	NA	94596300	94574053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94590852_94590944_94592240_94592310_94593840_94593908_94596161
transcript_40007.nnic	chr13	-	1866	11	NIC	ENSG00000088451.11	novel	1797	12	NA	NA	-70	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_8	47.8493469129935	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTAATCCTTCTTTGC	NA	False	NA	NA	False	AATAAA	-17	NA	94596312	94574053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_94574853_94576313_94576412_94577370_94577430_94578004_94578171_94578729_94578774_94579893_94579954_94581090_94581190_94583093_94583237_94592240_94592310_94593840_94593908_94596050
transcript_40016.known	chr13	+	8884	9	FSM	ENSG00000152749.8	ENST00000376958.5	8884	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	16.8999815088656	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGTATTGTCTGCAAATAAT	94599707	True	NA	27	True	AATAAA	-38	NA	94601856	94634661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_94602073_94605390_94605550_94612189_94612391_94619149_94619331_94619467_94619518_94621077_94621236_94623108_94623301_94625965_94626044_94627012
transcript_40027.nnic	chr13	+	617	3	NNC	ENSG00000227640.4	novel	1565	4	NA	NA	-578	-11290	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCTGGATGTCTATGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	94702875	94704019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_94702981_94703374_94703586_94703718
transcript_40037.nnic	chr13	+	1097	6	NNC	ENSG00000134873.10	novel	2466	5	NA	NA	-62	-1521	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	321.88917347435	305	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAAAATGTTTTCTACA	95547254	True	NA	21	True	AATAAA	-17	NA	95552657	95578238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_95552974_95557534_95557625_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_40046.known	chr13	+	2466	5	FSM	ENSG00000134873.10	ENST00000299339.3	2466	5	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	43.2695042726399	1651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTTGAAATATCTTTT	95547316	True	NA	9	True	AATAAA	-19	NA	95552719	95579759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_95552974_95560131_95560294_95560381_95560464_95577230_95577339_95577899
transcript_40049.known	chr13	-	401	2	FSM	ENSG00000247400.5	ENST00000606011.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTCCATTTTTATAAAT	-95676474	False	NA	NA	False	NA	NA	NA	95676794	95648732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95648835_95676495
transcript_40050.known	chr13	-	2909	2	FSM	ENSG00000247400.5	ENST00000671463.2	2927	2	18	0	-10	0	multi-exon	FALSE	canonical	3	13	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAATCTAGTAAAATATCTA	-95676635	True	NA	NA	False	TTTAAA	-44	NA	95676955	95672863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95674669_95675851
transcript_40052.known	chr13	+	5590	12	FSM	ENSG00000102580.15	ENST00000602402.6	5590	12	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	7.92944090449328	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTGCTTTTGATTCAT	95673114	True	NA	21	True	AATAAA	-23	NA	95677138	95794988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006_95787156_95790872
transcript_40054.nic	chr13	+	1444	11	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-23	7886	-23	-4741	5prime_fragment	FALSE	canonical	3	45	junction_4	8.2	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAGAAAAAGTTCATTGATA	95673091	True	NA	NA	False	AAAAAG	-2	NA	95677115	95787102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643_95757797_95760039_95760222_95760678_95760799_95763642_95763749_95763832_95763954_95785938_95786072_95787006
transcript_40056.nic	chr13	+	1374	5	ISM	ENSG00000102580.15	ENST00000602402.6	5590	12	-23	36504	-23	-33359	5prime_fragment	FALSE	canonical	3	45	junction_4	11.9373363863133	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATTAGCTGGGTGTGGT	95673091	True	NA	NA	False	NA	NA	NA	95677115	95758484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_95677338_95709226_95709338_95723241_95723367_95725177_95725253_95757643
transcript_40066.known	chr13	-	1233	10	FSM	ENSG00000102595.21	ENST00000376714.7	1233	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	84.0041151255383	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGTTTCTTGTAATTAG	-96053372	False	NA	NA	False	AATAAA	-16	NA	96053482	95983523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95983596_95983803_95983865_95986332_95986433_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_40069.nic	chr13	-	1208	10	ISM	ENSG00000102595.21	ENST00000376747.8	4850	39	-24	182221	-24	-277	5prime_fragment	FALSE	canonical	3	60	junction_1	45.5894183087303	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGAATTCCTTTTTTAA	-96048589	True	NA	NA	False	AATAAA	-17	NA	96053425	95983800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_40070.known	chr13	-	1547	10	FSM	ENSG00000102595.21	ENST00000397618.7	1547	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	34.5814479628872	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAATTTTTAATTGTAAT	-96048564	True	NA	NA	False	AATAAA	-16	NA	96053400	95984909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95985338_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_40078.known	chr13	-	2240	8	FSM	ENSG00000102595.21	ENST00000376712.4	2240	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	65.4800172041916	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTTTGTATA	-96048557	True	NA	NA	False	NA	NA	NA	96053393	95990144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95991474_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_40081.nic	chr13	-	755	2	ISM	ENSG00000102595.21	ENST00000621375.5	1004	8	57	35577	-24	-35577	5prime_fragment	FALSE	canonical	3	212	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAATAAAATAAATTG	-96048589	True	NA	NA	False	AAAAAG	-6	NA	96053425	96031487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_96031972_96053154
transcript_40082.known	chr13	-	4850	39	FSM	ENSG00000102595.21	ENST00000376747.8	4850	39	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_8	52.3120365592382	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGATTGTTCCTTTTTCCT	-96048565	True	NA	4	True	AATAAA	-21	NA	96053401	95801579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_95801813_95832926_95833054_95837085_95837203_95853542_95853658_95854314_95854476_95856157_95856341_95859590_95859676_95860787_95860884_95863628_95863715_95867338_95867424_95877278_95877365_95877697_95877857_95884490_95884681_95887891_95887972_95890861_95890965_95894561_95894658_95895179_95895305_95900806_95900939_95902853_95903061_95925679_95925775_95927027_95927127_95927212_95927337_95936923_95937089_95939956_95940092_95947036_95947173_95947995_95948082_95949334_95949455_95970111_95970263_95972579_95972672_95983803_95983865_95986332_95986433_95989972_95990074_95996062_95996136_95999210_95999308_96013306_96013482_96023039_96023153_96023628_96023760_96031888_96031972_96053154
transcript_40083.known	chr13	+	5540	2	FSM	ENSG00000125249.7	ENST00000245304.5	5540	2	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTGTGGTTTTTTTGTT	97433082	True	NA	NA	False	AATAAA	-15	NA	97434168	97469128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_97434785_97464204
transcript_40085.known	chr13	+	3419	26	FSM	ENSG00000065150.21	ENST00000490680.5	3419	26	0	0	0	0	multi-exon	FALSE	canonical	3	997	junction_14	157.561599382591	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTCTTTGTTTTGTTTTT	97946334	True	NA	10	True	AATAAA	-19	NA	97976631	98021882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538_98000646_98002466_98002592_98002683_98002774_98002863_98003038_98006129_98006349_98008058_98008143_98009880_98010014_98010102_98010225_98012245_98012343_98014041_98014215_98015529_98015642_98015725_98015782_98016728_98016852_98018484_98018705_98019580_98019810_98020991_98021134_98021735
transcript_40095.nic	chr13	+	1879	10	ISM	ENSG00000065150.21	ENST00000490680.5	3419	26	-16	20547	-16	413	5prime_fragment	FALSE	canonical	3	1041	junction_6	57.0635340088593	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAAATTTGTTTGTTTTTT	97946318	True	NA	NA	False	ATTAAA	-18	NA	97976615	98001335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_97976787_97982502_97982584_97985420_97985614_97989061_97989165_97990125_97990223_97990432_97990538_97992891_97993015_97993104_97993226_97997530_97997619_98000538
transcript_4010.known	chr1	-	312	2	FSM	ENSG00000176261.16	ENST00000341885.6	312	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTCCCTCCTGTACCACT	-32638488	True	NA	NA	False	NA	NA	NA	32650565	32600171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32600351_32650432
transcript_40104.known	chr13	-	3124	23	FSM	ENSG00000088386.17	ENST00000376503.10	3124	23	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	2.93067278542089	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTAAGTGTTCATGTATCT	-98752511	False	NA	-6	True	AATAAA	-14	NA	98752672	98683800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_98684916_98686189_98686298_98687580_98687725_98688247_98688357_98688469_98688578_98702479_98702530_98704288_98704436_98706133_98706254_98708685_98708768_98709571_98709661_98709741_98709775_98709866_98709912_98711853_98711944_98712497_98712585_98715877_98715961_98719236_98719321_98721494_98721586_98721803_98721904_98723911_98724032_98726122_98726265_98726367_98726450_98726842_98726860_98752594
transcript_40107.known	chr13	-	1354	4	FSM	ENSG00000228889.8	ENST00000671580.1	1354	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.9124245031395	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAACAAGACTCCATCTCAA	-99200183	True	NA	NA	False	NA	NA	NA	99200693	99181222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99181876_99182584_99182703_99197547_99197803_99200365
transcript_40108.known	chr13	-	753	4	FSM	ENSG00000228889.8	ENST00000668596.1	753	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGAAGCCTGAGACCAGAG	-99200195	True	NA	NA	False	AATAAA	-23	NA	99200705	99181563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99181876_99182584_99182703_99197547_99197803_99200637
transcript_4011.known	chr1	-	1567	7	FSM	ENSG00000176261.16	ENST00000468695.6	1567	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_3	168.835883495054	1943	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTATTGTTGTTTTTG	-32638473	True	NA	-3	True	AATAAA	-19	NA	32650550	32620819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_40110.known	chr13	-	686	3	FSM	ENSG00000228889.8	ENST00000662755.1	686	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGAAGCCTGAGACCAGA	-99200247	True	NA	NA	False	AATAAA	-22	NA	99200757	99181564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99181876_99197547_99197803_99200637
transcript_40113.known	chr13	-	1499	2	FSM	ENSG00000228889.8	ENST00000445737.2	1499	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	-99200200	True	NA	-15	True	AATAAA	-16	NA	99200710	99196376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99197803_99200637
transcript_40114.known	chr13	-	1749	2	FSM	ENSG00000228889.8	ENST00000668873.1	1749	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATCCTGCTCATTCT	-99200207	True	NA	-80	True	CATAAA	-25	NA	99200717	99196441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99197803_99200329
transcript_40115.known	chr13	-	1771	2	FSM	ENSG00000228889.8	ENST00000658188.1	1765	2	-9	3	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTTAGCATCAGGAA	-99200200	True	NA	-15	True	AATAAA	-16	NA	99200710	99196376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99197803_99200365
transcript_40117.nic	chr13	+	2328	10	NIC	ENSG00000134882.16	novel	2259	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	205.286129735373	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTTCAGTATTTTTCTAT	99194642	True	NA	16	True	AATAAA	-17	NA	99200846	99386427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_99200940_99201428_99201568_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_4012.known	chr1	-	514	6	FSM	ENSG00000176261.16	ENST00000436661.6	514	6	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	215.140326298907	2421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638483	True	NA	-6	True	AATAAA	-17	NA	32650560	32621829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_40120.known	chr13	+	2259	9	FSM	ENSG00000134882.16	ENST00000403766.8	2259	9	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_1	16.8962828752362	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTCCGCACTGCTCGTCTT	99194649	True	NA	25	True	AATAAA	-40	NA	99200853	99386504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99200940_99238426_99238555_99243831_99243952_99244514_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_4013.known	chr1	-	588	7	FSM	ENSG00000176261.16	ENST00000476493.6	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_6	320.050733825471	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTACGAAGAACTGTTTTTG	-32638473	True	NA	-17	True	AATAAA	-6	NA	32650550	32621840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634111_32634767_32634793_32650428
transcript_40131.known	chr13	+	1855	6	FSM	ENSG00000134882.16	ENST00000494576.5	1855	6	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_5	15.9949992185058	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATTTTTCTATCAGACTT	99244491	False	NA	23	True	AATAAA	-24	NA	99244514	99386434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99244625_99314096_99314221_99318021_99318070_99340319_99340566_99367786_99367907_99385227
transcript_40135.known	chr13	+	3417	17	FSM	ENSG00000125304.10	ENST00000376387.5	3417	17	0	0	0	0	multi-exon	TRUE	canonical	3	1312	junction_3	160.328958706779	830	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTTTTTTTTTTGAGA	99491788	True	NA	NA	False	NA	NA	NA	99501471	99564048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99501778_99517613_99517682_99520035_99520130_99529466_99529595_99536607_99536738_99537738_99537864_99539445_99539558_99540713_99540794_99541558_99541668_99543862_99543996_99546984_99547105_99549164_99549223_99552166_99552327_99554303_99554456_99555535_99555648_99559362_99559535_99562690
transcript_4014.known	chr1	-	598	7	FSM	ENSG00000176261.16	ENST00000373501.6	598	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	276.755457639652	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638448	True	NA	-6	True	AATAAA	-17	NA	32650525	32621829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32631826_32631880_32633644_32633728_32633950_32634073_32634701_32634793_32650432
transcript_40148.known	chr13	-	1002	3	FSM	ENSG00000280734.3	ENST00000630421.2	1002	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTTTCCTTGCTTTGCT	-99496745	False	16	NA	False	AATAAA	-19	NA	99496772	99486961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99487817_99496134_99496218_99496708
transcript_4015.known	chr1	-	620	7	FSM	ENSG00000176261.16	ENST00000473294.7	620	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	391.697871097383	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTGTTTTCCTCTTC	-32638458	True	NA	-6	True	AATAAA	-17	NA	32650535	32621829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32621949_32627507_32627545_32633261_32633355_32633644_32633728_32633950_32634111_32634767_32634793_32650432
transcript_40154.nnic	chr13	+	1250	9	NNC	ENSG00000125246.16	novel	1181	9	NA	NA	-30	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_8	36.3249225739023	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTGGACGACTGTTCCT	99605367	True	NA	9	True	ATTAAA	-20	NA	99606638	99892568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892422
transcript_40155.known	chr13	+	1169	9	FSM	ENSG00000125246.16	ENST00000339105.9	1181	9	6	6	6	-6	multi-exon	FALSE	canonical	3	50	junction_8	24.6056395974581	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	99605424	True	NA	5	True	ATTAAA	-16	NA	99606695	99892564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_40158.nnic	chr13	+	1264	9	NNC	ENSG00000125246.16	novel	386	4	NA	NA	111737	-6	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	34.2871604977723	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	NA	False	NA	5	True	ATTAAA	-16	NA	99718426	99892564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99718584_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_4016.known	chr1	-	538	2	FSM	ENSG00000176261.16	ENST00000466361.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTTGTGAGGCTGAGGCA	-32638458	True	NA	NA	False	AATACA	-41	NA	32650535	32634357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32634793_32650432
transcript_40160.known	chr13	+	6771	8	FSM	ENSG00000125246.16	ENST00000376355.7	6771	8	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	22.1147286777341	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGCTTTGAAACCAGCCAC	99605397	True	NA	NA	False	ATTAAA	-24	NA	99606668	99897134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817_99864912_99866239_99866408_99870937_99871063_99891317
transcript_40162.nic	chr13	+	1124	8	ISM	ENSG00000125246.16	ENST00000693071.1	3252	9	-34	16864	-30	-6	5prime_fragment	FALSE	canonical	1	3	junction_3	32.2389041187121	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGAGACTCTGGACGACTGT	99605367	True	NA	5	True	ATTAAA	-16	NA	99606638	99892564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99864817_99864912_99866239_99866408_99870937_99871063_99891317_99891438_99892442
transcript_40166.nic	chr13	+	1018	5	ISM	ENSG00000125246.16	ENST00000339105.9	1181	9	-51	27332	-30	0	5prime_fragment	FALSE	canonical	3	89	junction_3	14.6692706021806	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	99605367	True	NA	8	True	AATAAA	-22	NA	99606638	99865238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_99606758_99772823_99773011_99858860_99859050_99862990_99863093_99864817
transcript_40168.nnic	chr13	+	1056	5	NNC	ENSG00000125246.16	novel	712	3	NA	NA	111737	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	44.7967632759332	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	NA	False	NA	8	True	AATAAA	-22	NA	99718426	99865238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99718584_99772823_99773011_99858860_99859050_99862990_99863093_99864817
transcript_4017.known	chr1	-	680	6	FSM	ENSG00000176261.16	ENST00000483138.5	680	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	288.499566724111	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGTTTTAATTTGTAT	-32638458	True	NA	NA	False	TATAAA	-16	NA	32650535	32627571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32627866_32631826_32631880_32633644_32633728_32633950_32634073_32634767_32634793_32650432
transcript_40171.nic	chr13	+	1376	2	ISM	ENSG00000125246.16	ENST00000376354.5	1127	7	-51	117533	-30	-91158	5prime_fragment	FALSE	canonical	3	100	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGCCAGGTGTGGCGG	99605367	True	NA	NA	False	NA	NA	NA	99606638	99774080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_99606758_99772823
transcript_40173.nnic	chr13	+	1254	2	NNC	ENSG00000125246.16	novel	1127	7	NA	NA	-19	-164019	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAATGCATATCAGGAAAT	99605378	True	NA	NA	False	AATAAA	-22	NA	99606649	99701219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_99606758_99700073
transcript_40174.known	chr13	+	1127	7	FSM	ENSG00000125246.16	ENST00000376354.5	1127	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	34.0330721504833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGCTTATGATTTTATC	99605418	True	NA	2	True	AATGAA	-17	NA	99606689	99891613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99606758_99772823_99773011_99858860_99859050_99864817_99864912_99866239_99866408_99870937_99871063_99891317
transcript_40175.known	chr13	+	712	3	FSM	ENSG00000125246.16	ENST00000416504.5	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	20	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTGCTTCAGTATTTTGT	NA	False	NA	8	True	AATAAA	-22	NA	99858860	99865238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99859050_99862990_99863093_99864817
transcript_40178.known	chr13	-	2274	3	FSM	ENSG00000286757.3	ENST00000671519.1	2274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTCAAGGCAAATACCATT	-99957055	True	NA	NA	False	CATAAA	-24	NA	99957153	99864291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99866421_99866515_99866590_99957082
transcript_40180.known	chr13	-	4639	2	FSM	ENSG00000139800.9	ENST00000267294.5	4497	2	-142	0	-142	0	multi-exon	FALSE	canonical	3	371	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAATGTCTTCCCTTGGTC	-99971834	False	NA	29	True	AATAGA	-17	NA	99971909	99962963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_99965820_99970126
transcript_40181.known	chr13	+	218	2	FSM	ENSG00000043355.12	ENST00000481565.1	218	2	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGAAAATATAAAACAAATA	99985482	False	NA	-32	True	NA	NA	NA	99985493	99985904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_99985673_99985865
transcript_40184.known	chr13	-	913	2	FSM	ENSG00000274605.3	ENST00000612598.2	1038	2	119	6	102	-6	multi-exon	FALSE	canonical	3	205	junction_1	0	308	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTGAGATTTGAGGATTGC	-100086818	True	NA	-7	True	AATAAA	-19	NA	100088848	100086030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100086728_100088632
transcript_4019.nic	chr1	+	1556	13	NIC	ENSG00000162521.19	novel	7883	12	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	2	76	junction_12	481.445047054525	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCATGCTGATGGGTTT	32623157	True	NA	20	True	AATAAA	-15	NA	32651147	32680651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639_32679699_32680525
transcript_40193.known	chr13	+	2484	24	FSM	ENSG00000175198.17	ENST00000376285.6	2484	24	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_10	29.9982986285042	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTAGTTTGCCCTTTCTTT	100083276	True	NA	16	True	AATAAA	-19	NA	100089092	100530435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_40199.known	chr13	+	2418	23	FSM	ENSG00000175198.17	ENST00000376279.7	2418	23	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_21	61.3643265954447	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100089014	100530432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100527674_100527753_100530097
transcript_40204.known	chr13	+	2481	23	FSM	ENSG00000175198.17	ENST00000376286.8	2481	23	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	70.0828464882872	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100089014	100530432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100089226_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100257594_100257674_100262728_100262832_100268688_100268784_100273195_100273347_100301459_100301604_100302923_100302999_100307191_100307261_100309832_100309909_100330560_100330672_100340156_100340260_100368471_100368575_100425632_100425732_100449251_100449306_100515426_100515568_100527674_100527753_100530097
transcript_4023.known	chr1	+	7883	12	FSM	ENSG00000162521.19	ENST00000373493.10	7883	12	0	0	0	0	multi-exon	FALSE	canonical	3	1658	junction_9	108.727424749058	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATCTGTTTCTTTTTTT	32623217	True	NA	NA	False	AATAAA	-16	NA	32651207	32686211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32679639
transcript_40239.nnic	chr13	+	795	9	NNC	ENSG00000175198.17	novel	2196	21	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_8	106.566587165021	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATTCTGTGGTTTCTTTA	100083226	True	NA	NA	False	AATAAA	-16	NA	100089042	100237497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_100089226_100102882_100102961_100111840_100111889_100111992_100112062_100154978_100155093_100157286_100157341_100209331_100209464_100235841_100235879_100237417
transcript_40247.known	chr13	+	602	4	FSM	ENSG00000175198.17	ENST00000428969.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	164.121905911429	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGTTTGCCCTTTC	NA	False	NA	13	True	AATAAA	-16	NA	100515426	100530432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_100515568_100527296_100527345_100527674_100527753_100530097
transcript_40249.known	chr13	-	393	3	FSM	ENSG00000134864.11	ENST00000471912.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	2.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCAGCCTTTCGGGCGCG	-100588530	True	NA	NA	False	NA	NA	NA	100588731	100532513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100532602_100583824_100583998_100588599
transcript_4025.known	chr1	+	1417	12	FSM	ENSG00000162521.19	ENST00000373485.5	1417	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	520.603384831025	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGATGGGTTTTATTTA	32623243	True	NA	26	True	AATAAA	-21	NA	32651233	32680657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224_32668399_32668738_32668855_32668971_32669133_32669230_32669358_32669485_32669564_32672449_32672527_32672641_32672700_32672790_32672902_32680525
transcript_40250.known	chr13	-	2644	3	FSM	ENSG00000134864.11	ENST00000683975.1	2644	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAATCCTTCATTCC	-100588588	True	NA	NA	False	ATTAAA	-18	NA	100588789	100530179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100532602_100583824_100583998_100588740
transcript_40252.known	chr13	-	348	1	FSM	ENSG00000234354.3	ENST00000427219.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	442	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	-100540236	False	NA	NA	False	NA	NA	NA	100540248	100539900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100539900_100540200
transcript_40253.known	chr13	-	3911	19	FSM	ENSG00000125247.16	ENST00000342624.10	3911	19	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	29.0688837074973	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTTTTTTTTTTTTTG	-100672978	True	NA	-2	True	AATAAA	-16	NA	100674795	100603624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100670359_100670570_100674743
transcript_40254.known	chr13	-	3483	18	FSM	ENSG00000125247.16	ENST00000376234.7	3483	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	39.9998269892452	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCATATTGCCTTCTTAAT	-100673062	True	NA	-4	True	AGTAAA	-26	NA	100674879	100603926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_100605143_100606357_100606428_100612397_100612511_100614315_100614431_100625534_100625677_100625784_100625893_100626070_100626151_100634804_100634937_100635023_100635196_100636531_100636735_100637537_100637703_100637929_100638023_100642210_100642312_100656380_100656469_100662963_100663181_100664220_100664337_100668578_100668795_100674743
transcript_40269.nic	chr13	-	880	3	ISM	ENSG00000125247.16	ENST00000342624.10	3911	19	-40	64592	-40	145	5prime_fragment	FALSE	canonical	3	142	junction_1	2.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATCACGCATTTGCTGCA	-100673018	True	NA	NA	False	AAAACA	-30	NA	100674835	100668216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_100668795_100670359_100670570_100674743
transcript_40272.known	chr13	+	1074	1	FSM	ENSG00000272143.1	ENST00000606448.1	1074	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	203	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATGTGTCGTGAACAGAG	102394119	True	NA	8	True	ATTAAA	-16	NA	102394629	102395703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102394600_102395700
transcript_40276.known	chr13	+	3931	29	FSM	ENSG00000134900.12	ENST00000376065.8	3931	29	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_8	43.1062255790677	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACTGACGTGTGGCTTAA	102590678	True	NA	10	True	ATTAAA	-23	NA	102597002	102678461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_40279.nnic	chr13	+	2127	14	NNC	ENSG00000134900.12	novel	4341	27	NA	NA	-44	5514	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_13	68.0128773048894	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCATCTTTAATTTTTGG	102590617	True	NA	NA	False	AAAAAG	-9	NA	102596941	102637046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102636694
transcript_40284.nic	chr13	+	1589	6	ISM	ENSG00000134900.12	ENST00000376065.8	3931	29	-61	54713	-44	-4164	5prime_fragment	FALSE	canonical	3	249	junction_5	22.1395573578154	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGTTATTCTTACTGT	102590617	True	NA	NA	False	AATATA	-13	NA	102596941	102623748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876
transcript_40285.known	chr13	+	691	3	FSM	ENSG00000134900.12	ENST00000490010.1	691	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	154	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGTTTGTCTTTTCTCAG	102590708	True	NA	NA	False	AATAAA	-14	NA	102597032	102608022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102597204_102604792_102604922_102607631
transcript_40287.known	chr13	+	5484	30	FSM	ENSG00000134900.12	ENST00000376052.5	5484	30	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_24	70.5195767255149	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCCTATTCATTTGTG	102590661	True	NA	NA	False	AATAAA	-17	NA	102596985	102679958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102597204_102604792_102604922_102614100_102614197_102616395_102616501_102618721_102618847_102622876_102623041_102627011_102627167_102627847_102627925_102629481_102629610_102630095_102630196_102633949_102634099_102635586_102635703_102636223_102636393_102637081_102637240_102638238_102638316_102640269_102640377_102643221_102643377_102644556_102644674_102644908_102645010_102646293_102646391_102647206_102647345_102648906_102649152_102649407_102649487_102651358_102651398_102657055_102657208_102663647_102663745_102664794_102664926_102674282_102674491_102676295_102676416_102678226
transcript_40294.known	chr13	-	1038	5	FSM	ENSG00000151287.17	ENST00000376021.8	1038	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	60.0187470712277	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772263	True	NA	0	True	ATTAAA	-23	NA	102773759	102766109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102773681
transcript_40298.known	chr13	-	828	4	FSM	ENSG00000151287.17	ENST00000376022.5	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	80.6597793203031	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772259	True	NA	0	True	ATTAAA	-23	NA	102773755	102766109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102773681
transcript_40302.known	chr13	-	1362	6	FSM	ENSG00000151287.17	ENST00000376032.9	1362	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_5	26.0353605698097	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTTCACTGAAGGCTT	-102772290	True	NA	1	True	AATAAA	-15	NA	102773786	102765887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102767272_102767479_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_40303.known	chr13	-	959	5	FSM	ENSG00000151287.17	ENST00000376029.3	959	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	65.9640053362438	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTTTTGTCTTATTGAT	-102772315	True	NA	0	True	ATTAAA	-23	NA	102773811	102766109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102766581_102768259_102768312_102769310_102769542_102770011_102770087_102773681
transcript_40306.known	chr13	-	2029	10	FSM	ENSG00000134901.13	ENST00000376004.5	2029	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	10.9217192152739	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTGTGCTAATTATTA	-102797630	True	NA	-2	True	AATAAA	-21	NA	102798976	102784280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_102784513_102786231_102786340_102787833_102787924_102789011_102789222_102790900_102791139_102791257_102791431_102793340_102793419_102793600_102793807_102796803_102797010_102798488
transcript_40310.known	chr13	+	3888	15	FSM	ENSG00000134899.24	ENST00000652225.2	3888	15	0	0	0	0	multi-exon	FALSE	non_canonical	3	73	junction_8	12.0781891466074	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTAGTGTGTGGTT	102845201	True	NA	23	True	AATAAA	-20	NA	102846031	102875995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102846355_102852117_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_40312.known	chr13	+	3789	11	FSM	ENSG00000134897.14	ENST00000257336.6	3789	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	9.1874914965947	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATGAATGTTTTTAAAC	102798873	True	NA	NA	False	AATAAA	-21	NA	102799118	102841533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102799522_102805306_102805391_102807145_102807746_102816427_102816555_102821036_102821133_102821742_102821848_102822064_102822160_102831564_102831698_102834465_102834553_102838642_102838740_102839571
transcript_40314.known	chr13	+	4024	15	FSM	ENSG00000134899.24	ENST00000652613.1	4024	15	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_1	27.1251822151314	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAACTGGTGGCACGG	102845835	False	NA	1	True	AATGAA	-20	NA	102845866	102875973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_102846355_102852124_102852294_102853756_102853873_102854287_102854375_102856051_102856113_102858274_102858419_102861506_102861715_102862029_102863104_102865666_102865912_102866261_102866382_102866631_102866846_102868112_102868258_102872197_102872399_102873258_102873344_102875306
transcript_40315.known	chr13	-	668	1	FSM	ENSG00000274204.1	ENST00000614612.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTAAAGTCTCAGCTTCT	NA	False	NA	NA	False	AATAAA	-21	NA	106506713	106506045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_106506000_106506700
transcript_40317.nic	chr13	-	1799	5	NIC	ENSG00000134884.15	novel	821	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	186	junction_3	619.702146196058	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTGAAGCAATTTTTTT	-106547854	True	NA	-7	True	AATAAA	-35	NA	106568169	106543326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_106544161_106557047_106557132_106557558_106557617_106559431_106559658_106567572
transcript_40320.known	chr13	-	3363	4	FSM	ENSG00000134884.15	ENST00000400198.8	3363	4	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_2	251.142721707532	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGTGTGAGGACTCTTT	-106547822	True	NA	NA	False	TATAAA	-17	NA	106568137	106541672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_106544161_106557047_106557132_106559431_106559658_106567572
transcript_40331.known	chr13	-	3981	3	FSM	ENSG00000174405.15	ENST00000442234.6	3981	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	5.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCTTATGTTCTATTC	-108214954	True	NA	NA	False	AATAAA	-22	NA	108215536	108207441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_108211297_108214537_108214611_108215483
transcript_40332.known	chr13	+	5313	2	FSM	ENSG00000139826.6	ENST00000375898.4	5313	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTCTTCAGATAGTTT	108216695	True	NA	12	True	AATAAA	-21	NA	108218391	108234243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_108218660_108229198
transcript_40339.known	chr13	-	1507	2	FSM	ENSG00000139832.5	ENST00000267328.5	1507	2	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	0	365	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGACTGAACTGAC	-110559605	True	NA	-1	True	ATTAAA	-22	NA	110561722	110523065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110524198_110561347
transcript_40342.known	chr13	+	2515	10	FSM	ENSG00000213995.12	ENST00000680254.1	2515	10	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_3	9.54521404218424	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613596	True	NA	10	True	ATTAAA	-23	NA	110615544	110639996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_40344.known	chr13	+	2559	10	FSM	ENSG00000213995.12	ENST00000680505.1	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	38.2925709198837	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613679	True	NA	10	True	ATTAAA	-23	NA	110615627	110639996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615775_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_40346.nnic	chr13	+	2469	9	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-75	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_8	45.6172938697595	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	NA	False	NA	10	True	ATTAAA	-23	NA	110615469	110639996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110622215_110622367_110624233_110624280_110625189_110625279_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110638377
transcript_40349.known	chr13	+	2377	9	FSM	ENSG00000213995.12	ENST00000470164.2	2377	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	42.5776863509515	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613642	True	NA	7	True	ATTAAA	-20	NA	110615590	110639993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110622215_110622367_110624233_110624280_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_40358.known	chr13	+	2216	7	FSM	ENSG00000213995.12	ENST00000424185.7	2216	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	51.9326486903951	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGAGTATTGTATTTTT	110613606	True	NA	7	True	ATTAAA	-20	NA	110615554	110639993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110615648_110627438_110627548_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_4036.known	chr1	+	762	4	FSM	ENSG00000162521.19	ENST00000401893.7	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	98.3564944474944	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACTGGTGCTGTTTAAGCA	32623219	True	NA	NA	False	NA	NA	NA	32651209	32668579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426_32657573_32668224
transcript_40362.nnic	chr13	+	2133	6	NIC	ENSG00000213995.12	novel	2515	10	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_1	48.8696224663134	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTATTTTTTTC	110613583	True	NA	10	True	ATTAAA	-23	NA	110615531	110639996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_110615648_110634544_110634596_110634671_110634777_110635467_110635589_110637128_110637250_110638377
transcript_4037.known	chr1	+	501	3	FSM	ENSG00000162521.19	ENST00000525506.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	118.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGAAAGCCTGAGTTTGCA	32623227	True	NA	NA	False	AGTAAA	-31	NA	32651217	32657674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913_32652062_32657426
transcript_40372.known	chr13	-	1838	15	FSM	ENSG00000134905.17	ENST00000257347.9	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	36.5971589172756	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCCCACTGGCGTCTG	-110701149	True	NA	-9	True	ATTAAA	-14	NA	110706116	110641416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110641609_110642314_110642522_110644384_110644484_110645966_110646091_110647100_110647240_110651033_110651101_110663450_110663519_110667339_110667474_110676973_110677104_110683050_110683135_110687720_110687827_110687946_110688019_110701437_110701556_110705520_110705572_110705869
transcript_40379.known	chr13	+	1074	2	FSM	ENSG00000153487.13	ENST00000375775.3	1074	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAGTCTCAGACTGATTT	110713354	False	NA	11	True	AATATA	-15	NA	110713459	110720175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110713587_110719228
transcript_40380.known	chr13	+	4697	2	FSM	ENSG00000153487.13	ENST00000333219.9	4697	2	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTTCCTCTTATTATAT	110711864	True	NA	NA	False	AATAAA	-19	NA	110713699	110723339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110714286_110719228
transcript_40383.known	chr13	+	2870	2	FSM	ENSG00000153487.13	ENST00000375774.3	2870	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGCCGTGCTTATGTGCGT	110714968	False	NA	22	True	AATAAA	-14	NA	110714981	110721071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_110716009_110719228
transcript_4039.known	chr1	+	690	2	FSM	ENSG00000162521.19	ENST00000465780.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	1668	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATTACAATGAGTCTAGT	32623235	True	NA	NA	False	AAAAAG	-6	NA	32651225	32652506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32651323_32651913
transcript_4040.known	chr1	-	395	2	FSM	ENSG00000224409.1	ENST00000421619.1	395	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTGGTCCCAGCTACATG	NA	False	NA	NA	False	AATAAA	-25	NA	32725237	32717733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32717969_32725077
transcript_40404.known	chr13	-	2495	6	FSM	ENSG00000088448.14	ENST00000267339.6	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	286.883530374262	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTCCCTGGGGTTTCTC	-110897627	True	NA	-1	True	AATAAA	-16	NA	110915069	110878539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110880113_110883697_110883794_110893027_110893264_110906032_110906125_110910617_110910771_110914724
transcript_4041.known	chr1	+	684	4	FSM	ENSG00000162522.11	ENST00000468130.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	2.05480466765633	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAGAGTTAGAAAATCTTG	32747252	True	NA	58	True	TATAAA	-5	NA	32754018	32768946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32754181_32767786_32767958_32768061_32768118_32768651
transcript_40428.known	chr13	-	1193	5	FSM	ENSG00000088448.14	ENST00000310847.8	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	137.812372448921	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTTTTAATTT	-110897564	True	NA	0	True	ATTAAA	-24	NA	110915006	110892691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110893264_110894108_110894203_110906032_110906125_110910617_110910771_110914724
transcript_40432.known	chr13	-	997	5	FSM	ENSG00000088448.14	ENST00000465753.1	997	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	152.736701548776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGCACCTTCGAGATGAG	-110897595	True	NA	31	True	NA	NA	NA	110915037	110892956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110893264_110900529_110900662_110906032_110906125_110910617_110910771_110914724
transcript_40435.nic	chr13	-	1361	5	NIC	ENSG00000088448.14	novel	997	5	NA	NA	-40	-6	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	144.65886595712	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897667	True	NA	-6	True	ATTAAA	-18	NA	110915109	110892697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_110893264_110900529_110900695_110906032_110906125_110910617_110910771_110914724
transcript_40439.nnic	chr13	-	1260	5	NNC	ENSG00000088448.14	novel	1193	5	NA	NA	-40	-6	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_2	154.548333863552	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897667	True	NA	-6	True	ATTAAA	-18	NA	110915109	110892697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_-_110893264_110903475_110903540_110906032_110906125_110910617_110910771_110914724
transcript_40447.nic	chr13	-	1196	4	ISM	ENSG00000088448.14	ENST00000267339.6	2495	6	-40	14158	-40	-6	5prime_fragment	FALSE	canonical	3	147	junction_1	107.908397366573	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAATTTTTTTTTTTTTT	-110897667	True	NA	-6	True	ATTAAA	-18	NA	110915109	110892697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_-_110893264_110906032_110906125_110910617_110910771_110914724
transcript_40450.known	chr13	-	535	4	FSM	ENSG00000088448.14	ENST00000460846.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	174.997777763668	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCCTTTGGTTTCCATTTC	-110914793	False	NA	NA	False	AATAAA	-18	NA	110914803	110905022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_110905234_110906032_110906125_110910617_110910771_110914724
transcript_40465.known	chr13	-	3879	22	FSM	ENSG00000126216.15	ENST00000261965.8	3879	22	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	21.6082414780389	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCATTCGTTATTTCTTG	-112584005	True	NA	-5	True	ATTAAA	-16	NA	112588153	112485010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_112486152_112489580_112489698_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_40466.known	chr13	-	2723	21	FSM	ENSG00000126216.15	ENST00000375669.7	2723	21	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	46.0593095910045	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACAAATCTCCTGCCCGTT	-112583977	True	NA	NA	False	AATAAA	-25	NA	112588125	112498806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_112498937_112499044_112499186_112504031_112504164_112504625_112504715_112516439_112516576_112518974_112519044_112519885_112520022_112522319_112522510_112526941_112527051_112527373_112527485_112545698_112545866_112547619_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_4047.known	chr1	-	2248	12	FSM	ENSG00000134684.12	ENST00000675785.1	2248	12	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_11	328.569476407116	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTCCATAAGGCATCTCA	-32797114	True	NA	-82	True	AATGAA	-39	NA	32817380	32775308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32817187
transcript_40470.known	chr13	-	2461	10	FSM	ENSG00000126216.15	ENST00000464139.5	2461	10	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_1	22.4999314127898	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAAGAACTCTTCATGTGC	-112583987	True	NA	-3	True	AATAAA	-21	NA	112588135	112546481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_112547753_112548107_112548177_112554056_112554183_112554886_112555006_112556051_112556225_112558195_112558414_112559321_112559400_112565110_112565179_112569151_112569260_112587904
transcript_40475.nic	chr13	+	1029	7	ISM	ENSG00000126217.21	ENST00000375608.7	3648	30	-44	32210	-44	340	5prime_fragment	FALSE	canonical	3	30	junction_1	5.46961302714065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCTTGCGTTGTGGTTT	112892792	True	NA	NA	False	NA	NA	NA	112894333	113064651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_112894432_112902198_112902372_113014762_113014847_113024643_113024759_113045270_113045362_113060592_113060713_113064303
transcript_40480.nic	chr13	+	1638	3	NIC	ENSG00000126217.21	novel	1544	2	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_2	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCATTTGTTGTTCT	112892792	True	NA	NA	False	TATAAA	-15	NA	112894333	112910619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_112894432_112902198_112902372_112909252
transcript_40482.nnic	chr13	+	911	3	NNC	ENSG00000126217.21	novel	3648	30	NA	NA	-44	3131	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAAAGTGTCGAGTGATC	112892792	True	NA	NA	False	AATAAA	-18	NA	112894333	112961295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_112894432_112902198_112902372_112960655
transcript_40485.known	chr13	+	1544	2	FSM	ENSG00000126217.21	ENST00000397036.4	1544	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCCATTTGTTGTTCT	112902178	False	NA	NA	False	TATAAA	-15	NA	112902194	112910619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_112902372_112909252
transcript_40486.known	chr13	+	1450	8	FSM	ENSG00000126218.12	ENST00000409306.5	1450	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.35666664550076	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAAGGCCAAGAGCCATG	113122685	True	NA	-50	True	GGGGCT	-2	NA	113122813	113149462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113122926_113129451_113129613_113138456_113138482_113139356_113139471_113140918_113141051_113143850_113144096_113147378_113147493_113148915
transcript_4049.known	chr1	-	2075	11	FSM	ENSG00000134684.12	ENST00000674629.1	2075	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	348.299885156455	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCATCACTGTCATAAAT	-32797091	True	NA	-56	True	NA	NA	NA	32817357	32775282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32817187
transcript_40496.known	chr13	+	1111	6	FSM	ENSG00000139842.15	ENST00000488558.2	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	519.11231925278	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCATGAGCTTTAAACCCAA	113196461	True	NA	35	True	CATAAA	-17	NA	113209599	113230212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113209776_113209972_113210089_113218944_113219049_113227975_113228046_113229445_113229520_113229641
transcript_40499.known	chr13	-	1654	15	FSM	ENSG00000126226.22	ENST00000375477.5	1654	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	249.586688960214	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	-113200427	True	NA	-19	True	AATAAA	-21	NA	113208666	113177610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113178009_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40500.known	chr13	-	1897	14	FSM	ENSG00000126226.22	ENST00000337344.9	1897	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	220.585047801544	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGGCTCACTCTAGCC	-113200430	True	NA	56	True	AATACA	-22	NA	113208669	113177535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40501.known	chr13	-	1671	15	FSM	ENSG00000126226.22	ENST00000375479.6	1671	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	246.403445924089	898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGTTGGTTAAAAAAAAAT	-113200476	True	NA	-19	True	AATAAA	-21	NA	113208715	113177610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40502.known	chr13	-	654	7	FSM	ENSG00000126226.22	ENST00000491548.5	654	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	296.14617261676	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAAGAGCTGAGGGAAA	-113200413	True	NA	NA	False	AAAAAG	-18	NA	113208652	113190702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113190976_113195070_113195126_113196180_113196223_113197177_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40503.known	chr13	-	1786	15	FSM	ENSG00000126226.22	ENST00000246505.9	1786	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_11	246.207437013621	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTTGTTGGTTAAAAAAAAA	-113200430	True	NA	-20	True	AATAAA	-20	NA	113208669	113177611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113177977_113178173_113178288_113178965_113179090_113179916_113180043_113180157_113180232_113181129_113181231_113184345_113184488_113185484_113185561_113190871_113190976_113195070_113195126_113196180_113196226_113197018_113197244_113198190_113198265_113200426_113200517_113208598
transcript_40506.known	chr13	+	2701	9	FSM	ENSG00000185896.11	ENST00000332556.5	2701	9	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_4	45.3484770968111	1171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGGAATACTATGCAG	113274516	True	NA	37	True	ATTAAA	-21	NA	113297238	113323672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113297496_113306484_113306607_113309642_113309863_113310708_113310868_113319468_113319657_113320344_113320471_113321403_113321471_113321556_113321728_113322281
transcript_40511.nic	chr13	-	1416	8	NIC	ENSG00000139835.14	novel	1415	8	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_7	166.905325724202	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358109	False	NA	-1	True	NA	NA	NA	113364183	113324162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364071
transcript_40522.known	chr13	-	877	3	FSM	ENSG00000139835.14	ENST00000476439.1	877	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGACCTTTCTCTTAAATACA	-113358057	True	NA	NA	False	NA	NA	NA	113364131	113359616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113360285_113363761_113363911_113364071
transcript_40524.known	chr13	-	1415	8	FSM	ENSG00000139835.14	ENST00000375431.9	1415	8	0	0	0	0	multi-exon	FALSE	canonical	3	467	junction_1	27.5206786817121	1054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTGAGTGGTCACTGAG	-113358056	True	NA	-1	True	NA	NA	NA	113364130	113324162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113324578_113325660_113325847_113325918_113326092_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_40525.known	chr13	-	1073	6	FSM	ENSG00000139835.14	ENST00000620217.4	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	214.781190982823	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATAGTGAGTGGTCACTGA	-113358074	True	NA	-2	True	NA	NA	NA	113364148	113324163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113324578_113344862_113344960_113350848_113350974_113355322_113355482_113363761_113363911_113364019
transcript_40526.known	chr13	-	3164	8	FSM	ENSG00000150401.15	ENST00000375403.6	3164	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	23.4015523643459	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113488928	True	NA	-1	True	ATTAAA	-16	NA	113490691	113455818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113462739_113462892_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_40528.known	chr13	-	3032	7	FSM	ENSG00000150401.15	ENST00000478244.6	3032	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	26.7581763205193	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTTTCCTTTCGATTCT	-113488948	True	NA	-1	True	ATTAAA	-16	NA	113490711	113455818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_-_113458109_113459311_113459409_113461053_113461137_113474123_113474255_113480574_113480744_113483839_113484057_113490666
transcript_40530.known	chr13	+	330	2	FSM	ENSG00000233613.5	ENST00000414992.5	330	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGCTGTTTCTAGTTTC	NA	False	NA	NA	False	CATAAA	-19	NA	113468900	113476135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113468955_113475859
transcript_40531.known	chr13	+	3058	13	FSM	ENSG00000150403.18	ENST00000434316.7	3058	13	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_11	63.0923045140126	198	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTATTGAGCTTAT	113488970	True	NA	3	True	ATTAAA	-16	NA	113491020	113550229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113491274_113495501_113496026_113498341_113498522_113499957_113500150_113501751_113501881_113503495_113503589_113510237_113510425_113520615_113520734_113534044_113534241_113539356_113539508_113547299_113547380_113548302_113548453_113549424
transcript_40542.nnic	chr13	+	346	3	NNC	ENSG00000198176.13	novel	804	7	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	3	94	junction_2	4.5	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	113584648	False	NA	26	True	AATAAA	-34	NA	113584675	113586180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr13_+_113584731_113585773_113585850_113585965
transcript_40543.known	chr13	+	447	3	FSM	ENSG00000198176.13	ENST00000464794.5	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	191	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACCGCAGCGAATCCTGCA	113578852	True	NA	26	True	AATAAA	-34	NA	113584732	113586180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113584889_113585773_113585850_113585965
transcript_40545.known	chr13	+	2639	12	FSM	ENSG00000198176.13	ENST00000375370.10	2639	12	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_11	50.8946408063749	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTTTCTCTAATTCAG	113578872	True	NA	12	True	AATAAA	-24	NA	113584752	113641473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113584889_113585773_113585850_113610995_113611063_113623179_113623287_113631622_113631745_113633119_113633286_113633889_113634034_113634533_113634603_113635976_113636129_113636533_113636701_113637817_113637897_113640119
transcript_40550.known	chr13	+	6117	9	FSM	ENSG00000184497.13	ENST00000375353.5	6117	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	7.45716936913733	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCCGTATTACGTGAAGT	113758817	True	NA	NA	False	TTTAAA	-16	NA	113759225	113816995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_40557.nnic	chr13	+	1334	8	NIC	ENSG00000184497.13	novel	6117	9	NA	NA	-32	290	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	10.4861424591443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCGGCCTCCCTGCCTGT	113758785	True	NA	25	True	NA	NA	NA	113759193	113812243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_113759316_113766114_113766258_113795147_113795238_113799338_113799420_113800826_113800913_113801652_113801813_113804884_113805029_113811735
transcript_40561.known	chr13	+	694	5	FSM	ENSG00000184497.13	ENST00000488362.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	7.98044484975618	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	113758831	True	NA	9	True	ATTAAA	-17	NA	113759239	113799660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_113759316_113766114_113766258_113769097_113769161_113795147_113795238_113799338
transcript_40564.nnic	chr13	+	650	4	NIC	ENSG00000184497.13	novel	694	5	NA	NA	-32	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_3	15.195028426722	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	113758785	True	NA	9	True	ATTAAA	-17	NA	113759193	113799660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_113759316_113766114_113766258_113769097_113769161_113799338
transcript_40565.nnic	chr13	+	677	4	NIC	ENSG00000184497.13	novel	694	5	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	15.2534149181967	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGTGTCCAGTTCTGT	113758785	True	NA	9	True	ATTAAA	-17	NA	113759193	113799660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr13_+_113759316_113766114_113766258_113795147_113795238_113799338
transcript_40572.known	chr13	+	2034	19	FSM	ENSG00000130177.16	ENST00000252457.9	2034	19	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	92.3315282615376	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGTCTTTTTTTTTCT	114234995	False	NA	11	True	AATAAA	-15	NA	114235060	114272675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114235133_114236644_114236700_114236801_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183_114272482_114272563
transcript_40576.known	chr13	+	2331	18	FSM	ENSG00000130177.16	ENST00000356221.8	2331	18	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_6	36.9713252769435	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTGATTTACAGAAAAAT	114230586	True	NA	8	True	AATAAA	-18	NA	114234896	114272723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114235133_114236644_114236700_114236798_114236897_114238989_114239029_114239349_114239491_114242120_114242281_114243256_114243349_114243855_114243990_114244889_114244970_114245999_114246050_114246930_114247005_114250548_114250675_114257077_114257231_114259334_114259399_114261886_114261949_114262878_114263015_114265149_114265241_114272183
transcript_40581.known	chr13	+	2370	10	FSM	ENSG00000169062.15	ENST00000375299.8	2370	10	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	107.021054810909	1002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTTGAATCTGTGTCA	114277726	True	NA	8	True	AATAAA	-25	NA	114281600	114305817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_40585.known	chr13	+	2235	9	FSM	ENSG00000169062.15	ENST00000351487.5	2235	9	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_3	122.491772682903	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGAAATATTCTTTGAA	114277753	True	NA	-1	True	AATAAA	-16	NA	114281627	114305808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286518_114286630_114291488_114291545_114291633_114291793_114298839_114299001_114301730_114302026_114304788
transcript_40596.nic	chr13	+	856	7	ISM	ENSG00000169062.15	ENST00000375299.8	2370	10	-19	14073	-19	0	5prime_fragment	FALSE	canonical	3	220	junction_1	121.621909575902	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGACAGATAAACAGAAGAA	114281569	False	NA	-13	True	AAAAAG	-35	NA	114281581	114291744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr13_+_114281847_114282020_114282128_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_40606.known	chr13	+	699	6	FSM	ENSG00000169062.15	ENST00000484246.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	172.886552397808	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAGAAAATTGCAGAGAAA	114277770	False	NA	0	True	GATAAA	-2	NA	114281644	114291757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282836_114282944_114286301_114286401_114286518_114286630_114291488_114291545_114291633
transcript_40637.known	chr13	+	494	2	FSM	ENSG00000169062.15	ENST00000492270.1	494	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTCCGTTCCGTCAAAGA	114277728	True	NA	NA	False	AATAAA	-16	NA	114281602	114282270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr13_+_114281847_114282020
transcript_40645.known	chr14	-	4737	10	FSM	ENSG00000136319.12	ENST00000258821.8	4737	10	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_9	14.8656535113996	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGCTTTTTCATTTTCTT	-20303605	True	NA	0	True	TATAAA	-34	NA	20305951	20286226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300606_20300819_20301832_20301966_20305886
transcript_40646.known	chr14	-	1755	10	FSM	ENSG00000136319.12	ENST00000383029.7	1755	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.5509866876061	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACGTAGTTTGGCCTGC	-20303595	True	NA	NA	False	ATTAAA	-23	NA	20305941	20289130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20289747_20291982_20292128_20295311_20295527_20295707_20295855_20296389_20296447_20298796_20298889_20299297_20299449_20300674_20300819_20301832_20301966_20305886
transcript_40647.known	chr14	-	682	3	FSM	ENSG00000136319.12	ENST00000557379.1	682	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	16.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATACAGATGGCAGCAAGAA	-20303607	True	NA	NA	False	AAGAAA	-40	NA	20305953	20300336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20300819_20301832_20301966_20305886
transcript_40653.known	chr14	-	1613	7	FSM	ENSG00000100814.18	ENST00000398160.6	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	160.309769578221	901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20332986	False	NA	-8	True	AATAAA	-22	NA	20333010	20311367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20332843
transcript_40656.known	chr14	-	1305	6	FSM	ENSG00000100814.18	ENST00000353689.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	172.350805045988	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326800	True	NA	-8	True	AATAAA	-22	NA	20333312	20311367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20333253
transcript_40660.known	chr14	-	1470	7	FSM	ENSG00000100814.18	ENST00000358932.9	1470	7	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_6	102.256893274841	3127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	-20326767	True	NA	-10	True	AATAAA	-20	NA	20333279	20311369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_40661.known	chr14	-	1686	8	FSM	ENSG00000100814.18	ENST00000437553.6	1686	8	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	198.004122818342	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTTTCTATGTTCATCT	-20326800	True	NA	-8	True	AATAAA	-22	NA	20333312	20311367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317793_20317975_20325538_20325654_20326715_20326794_20329173_20329374_20333253
transcript_40662.known	chr14	-	1631	7	FSM	ENSG00000100814.18	ENST00000398169.7	1631	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	209.838562285921	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGACTGTTTCTATGTTCAT	-20322868	False	NA	-10	True	AATAAA	-20	NA	20329380	20311369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20311753_20313467_20313802_20316226_20316561_20317794_20317975_20325538_20325654_20326715_20326794_20329173
transcript_40669.known	chr14	+	1827	16	FSM	ENSG00000129484.14	ENST00000429687.8	1827	16	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	31.7851118187955	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336364	True	NA	14	True	AATAAA	-16	NA	20343634	20357904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20343688_20344931_20345088_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_40670.known	chr14	+	1886	16	FSM	ENSG00000129484.14	ENST00000250416.9	1886	16	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	87.3574012637484	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGGCTTCTTCGGGCTT	20336344	True	NA	14	True	AATAAA	-16	NA	20343614	20357904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20343688_20344931_20345127_20345393_20345465_20346862_20346914_20350525_20350623_20351046_20351123_20352244_20352348_20354084_20354248_20354808_20354948_20355751_20355816_20355896_20356032_20356306_20356435_20356589_20356690_20357050_20357150_20357395_20357521_20357637
transcript_40681.known	chr14	-	1976	11	FSM	ENSG00000092094.11	ENST00000206542.9	1976	11	0	0	0	0	multi-exon	TRUE	canonical	3	192	junction_8	12.6984250992003	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTCTACTCCGTATACT	-20454778	False	3755	NA	False	NA	NA	NA	20454812	20446400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20447280_20447421_20447521_20447614_20447691_20447903_20447995_20448105_20448172_20448732_20448812_20448963_20449014_20449170_20449267_20451973_20452150_20452328_20452449_20454568
transcript_4069.known	chr1	+	4220	7	FSM	ENSG00000116497.18	ENST00000373475.10	4220	7	0	0	0	0	multi-exon	TRUE	canonical	3	191	junction_1	46.2409150236262	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATGTACTGTGGCGGTCT	32812646	True	NA	20	True	AATAAA	-17	NA	32817652	32858875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827992_32828082_32829963_32830068_32853078_32853167_32855923
transcript_4071.known	chr1	+	1688	7	FSM	ENSG00000116497.18	ENST00000531123.5	1688	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	120.52477845747	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTTATCTTATTGTCAG	32817512	False	NA	NA	False	AATAGA	-19	NA	32817574	32843187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817690_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32834033_32834062_32842782
transcript_40710.known	chr14	-	830	3	FSM	ENSG00000092094.11	ENST00000556252.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	98	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTATTTAGAGGGCTCT	-20455019	False	3755	NA	False	NA	NA	NA	20455053	20451977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20452150_20452275_20452449_20454568
transcript_40712.known	chr14	-	1011	2	FSM	ENSG00000092094.11	ENST00000556439.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCCACTCCATCTCAATTT	-20455055	False	NA	NA	False	NA	NA	NA	20455089	20451958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20452449_20454568
transcript_40713.known	chr14	-	762	5	FSM	ENSG00000092094.11	ENST00000554699.1	762	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	100.99102682912	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGATATTGCAGTGGGTAA	-20454759	False	3755	NA	False	NA	NA	NA	20454793	20449221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20449267_20451256_20451453_20451973_20452150_20452328_20452449_20454568
transcript_40714.known	chr14	-	578	4	FSM	ENSG00000092094.11	ENST00000553640.3	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	88.1904504782437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTAATTGTCTGGATCGTT	-20454778	False	3755	NA	False	NA	NA	NA	20454812	20449207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20449267_20451994_20452150_20452328_20452449_20454568
transcript_40716.known	chr14	-	1696	7	FSM	ENSG00000165782.11	ENST00000398020.6	1696	7	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	78.622869163848	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTTTCAGTTGTTAACT	-20457710	True	NA	-16	True	AATAAA	-17	NA	20461465	20457857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461162
transcript_40717.known	chr14	-	1821	7	FSM	ENSG00000165782.11	ENST00000250489.9	1821	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	80.3258986877831	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCTCAAATAAAAAATCTTG	-20457679	True	NA	NA	False	TTTAAA	-11	NA	20461434	20457680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20458703_20459205_20459297_20459387_20459441_20459627_20459734_20460191_20460299_20460654_20460846_20461183
transcript_40719.known	chr14	+	899	5	FSM	ENSG00000100823.12	ENST00000553681.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	983.469750424486	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTGGACTTATATGA	20392809	True	NA	-32	True	NA	NA	NA	20455200	20457342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455241_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_4072.nic	chr1	+	1622	7	NIC	ENSG00000116497.18	novel	4220	7	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_3	69.8651478842555	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCCATTGCCGACTTGAA	32817495	True	NA	18	True	TTTAAA	-21	NA	32817557	32856185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_32817690_32825312_32825430_32826097_32826931_32827995_32828082_32829963_32830068_32853078_32853167_32855923
transcript_40723.known	chr14	+	640	5	FSM	ENSG00000100823.12	ENST00000557592.5	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	1125.73006866655	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTTTCGCAAGTTCCTG	20392856	True	NA	NA	False	NA	NA	NA	20455247	20457119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455339_20455734_20455774_20455913_20456102_20456667_20456861_20456990
transcript_40727.known	chr14	+	773	5	FSM	ENSG00000100823.12	ENST00000556054.5	773	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	981.344071923808	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCCGAGGTCTGGTACGA	20392855	True	NA	NA	False	NA	NA	NA	20455246	20457074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455429_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40729.known	chr14	+	654	4	FSM	ENSG00000100823.12	ENST00000554813.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1088.30459380124	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCCTGGCTTCCCGAAA	20392823	True	NA	NA	False	NA	NA	NA	20455214	20457139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455339_20455913_20456102_20456667_20456861_20456990
transcript_40730.known	chr14	+	831	4	FSM	ENSG00000100823.12	ENST00000557365.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	1073.96461766671	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGCTTTAGGCACCTCTAC	20392865	True	NA	-72	True	NA	NA	NA	20455256	20457302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455395_20455913_20456102_20456667_20456861_20456990
transcript_40736.known	chr14	+	1603	4	FSM	ENSG00000100823.12	ENST00000553555.5	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_2	215.388021951083	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTATCCACATGAAAATAAAG	20392834	True	NA	-18	True	TTTAAA	-39	NA	20455225	20457734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40737.known	chr14	+	1453	5	FSM	ENSG00000100823.12	ENST00000216714.8	1453	5	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_1	411.084845257034	8296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455395_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40738.known	chr14	+	1803	3	FSM	ENSG00000100823.12	ENST00000557159.5	1803	3	0	0	0	0	multi-exon	FALSE	canonical	3	2017	junction_1	255	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCACATGAAAATAAAGAGCC	20392848	True	NA	-14	True	TTTAAA	-43	NA	20455239	20457738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20456102_20456667_20456861_20456990
transcript_40739.known	chr14	+	1387	5	FSM	ENSG00000100823.12	ENST00000398030.8	1387	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1017.92887153278	2000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGCTGTCTTCGTGTCT	20392834	True	NA	15	True	AATAAA	-15	NA	20455225	20457767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20455329_20455577_20455704_20455913_20456102_20456667_20456861_20456990
transcript_40745.known	chr14	+	1477	6	FSM	ENSG00000198805.12	ENST00000361505.10	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	31.6417445789577	2416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCATTTTTTTGTGTAACT	20465415	True	NA	51	True	AATAAA	-17	NA	20469405	20477089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20469536_20472307_20472478_20474471_20474576_20474772_20474949_20475061_20475253_20476383
transcript_40753.known	chr14	+	1635	5	FSM	ENSG00000198805.12	ENST00000554056.5	1635	5	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_3	18.4458667456967	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTGTCAGAATAAAGAGAA	20465423	True	NA	20	True	NA	NA	NA	20469413	20477058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20469536_20472307_20472478_20474471_20474949_20475061_20475253_20476383
transcript_40764.known	chr14	+	1222	2	FSM	ENSG00000214274.10	ENST00000336811.10	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTTCTCACTGATT	NA	False	NA	15	True	AATAAA	-27	NA	20684176	20694186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20684759_20693546
transcript_40765.known	chr14	+	2061	2	FSM	ENSG00000258818.4	ENST00000555835.3	2061	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	20684199	True	NA	NA	False	ATTAAA	-22	NA	20684559	20701216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20684759_20699354
transcript_40766.known	chr14	+	932	2	FSM	ENSG00000181562.5	ENST00000326842.3	932	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGCTTATATATGTTA	NA	False	NA	NA	False	AATAAA	-19	NA	20745886	20748380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20745993_20747554
transcript_40767.known	chr14	+	844	2	FSM	ENSG00000169413.3	ENST00000304677.3	844	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTGTGTTTGAGATCC	20781256	True	NA	NA	False	AATAAA	-23	NA	20781267	20782467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20781339_20781694
transcript_40768.known	chr14	-	769	3	FSM	ENSG00000129538.14	ENST00000397970.4	769	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATCCCTGCGTGATTTT	-20802732	True	NA	-103	True	NA	NA	NA	20802848	20801459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_20802094_20802248_20802332_20802796
transcript_40775.known	chr14	+	1539	14	FSM	ENSG00000165792.18	ENST00000339374.11	1539	14	0	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	103.749356595995	1344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGATTTTGTGATTCTTAA	20979679	True	NA	16	True	AATAAA	-24	NA	20989979	20997035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_40776.known	chr14	+	1529	14	FSM	ENSG00000165792.18	ENST00000557550.6	1529	14	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	165.864812708044	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTTTTGAAGAATGGAAG	20979702	True	NA	-3	True	AATAAA	-5	NA	20990002	20997016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996784
transcript_40777.known	chr14	+	1586	13	FSM	ENSG00000165792.18	ENST00000382985.8	1586	13	0	0	0	0	multi-exon	FALSE	canonical	2	406	junction_8	96.4515926370437	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATAATAAATTTTTGAAGA	20979679	True	NA	-10	True	NA	NA	NA	20989979	20997009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_40778.known	chr14	+	1500	14	FSM	ENSG00000165792.18	ENST00000556670.6	1500	14	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_13	182.973564876971	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAAGTGGATTTTGTGATT	20979686	True	NA	11	True	AATAAA	-19	NA	20989986	20997030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992123_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526_20996712_20996811
transcript_40779.known	chr14	+	1605	13	FSM	ENSG00000165792.18	ENST00000555533.6	1605	13	0	0	0	0	multi-exon	FALSE	canonical	2	135	junction_3	168.139244543193	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAATTTTTGAAGAA	20979693	True	NA	-9	True	NA	NA	NA	20989993	20997010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20990078_20990229_20990384_20990463_20990599_20992091_20992206_20992540_20992623_20993117_20993192_20993968_20994064_20994542_20994614_20994793_20994902_20995164_20995234_20995900_20995952_20996208_20996293_20996526
transcript_40780.known	chr14	+	1376	4	FSM	ENSG00000165794.10	ENST00000298681.5	1376	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGCCATTCTGGATTTC	20999281	False	NA	NA	False	AATAAA	-18	NA	20999292	21001871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_20999562_20999741_20999873_21000115_21000167_21000946
transcript_40789.known	chr14	-	2079	17	FSM	ENSG00000165795.25	ENST00000397853.7	2079	17	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_16	35.2878785845792	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024383	True	NA	-14	True	AATAAA	-17	NA	21025094	21016771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025028
transcript_40791.nic	chr14	-	2159	17	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_16	37.4023207000582	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024961	False	NA	-14	True	AATAAA	-17	NA	21025539	21016771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025393
transcript_40792.known	chr14	-	2122	17	FSM	ENSG00000165795.25	ENST00000298687.9	2122	17	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_16	34.5377963251855	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	NA	False	NA	-5	True	AATAAA	-26	NA	21025776	21016762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21024029_21024097_21025676
transcript_40796.known	chr14	-	2022	16	FSM	ENSG00000165795.25	ENST00000397851.6	2022	16	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_15	36.8395922284104	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025028
transcript_40797.known	chr14	-	2054	16	FSM	ENSG00000165795.25	ENST00000397858.5	2054	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	38.5247972090704	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATTCTTTGTCTAGGTGT	NA	False	NA	-6	True	AATAAA	-25	NA	21025776	21016763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21022863_21022906_21023240_21023322_21025676
transcript_40801.known	chr14	-	2162	16	FSM	ENSG00000165795.25	ENST00000553503.5	2162	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_15	44.7032685854426	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024461	False	NA	-14	True	AATAAA	-17	NA	21025039	21016771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21024848
transcript_40802.nic	chr14	-	2058	16	NIC	ENSG00000165795.25	novel	2079	17	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_15	40.9664361262838	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	-21024537	False	NA	-14	True	AATAAA	-17	NA	21025115	21016771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025028
transcript_40805.known	chr14	-	2127	16	FSM	ENSG00000165795.25	ENST00000350792.7	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_15	40.2925965077126	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTCTTTGTCTAGGTGTG	NA	False	NA	-5	True	AATAAA	-26	NA	21025823	21016762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025676
transcript_40814.known	chr14	-	1980	15	FSM	ENSG00000165795.25	ENST00000554143.5	1980	15	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_14	42.857202380911	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTACCGTTATTATTCTTTG	-21024527	False	43	-15	True	AATAAA	-16	NA	21025105	21016772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025028
transcript_40815.known	chr14	-	2047	15	FSM	ENSG00000165795.25	ENST00000360463.7	2047	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_14	44.3888775368289	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACCGTTATTATTCTTTGT	NA	False	NA	-14	True	AATAAA	-17	NA	21025819	21016771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21017763_21017986_21018039_21018203_21018240_21018456_21018505_21018762_21018815_21019115_21019161_21019638_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21025676
transcript_40833.known	chr14	+	4902	23	FSM	ENSG00000165801.10	ENST00000556399.5	4902	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	82.7775696252182	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCTAGAGTAGTCCTC	21067539	True	NA	28	True	ATTAAA	-25	NA	21070290	21089555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21070400_21073044_21073243_21073931_21074992_21075331_21075500_21075622_21075766_21076359_21076457_21076562_21076644_21076773_21076891_21078176_21078273_21078372_21078489_21078883_21079011_21080659_21080783_21080872_21081017_21081508_21082120_21082243_21082479_21082830_21082918_21083834_21084051_21084752_21084924_21085688_21085867_21087000_21087106_21087967_21088099_21088829_21088877_21089013
transcript_40847.known	chr14	+	469	3	FSM	ENSG00000258604.1	ENST00000532213.2	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTTTATGTTGTCCACA	21024273	False	NA	NA	False	NA	NA	NA	21024295	21029271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21024345_21028445_21028535_21028940
transcript_40854.known	chr14	+	478	2	FSM	ENSG00000258604.1	ENST00000533984.1	478	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTTTTCATTAACTGCTG	21024149	False	NA	NA	False	AAAACA	-21	NA	21024171	21029245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21024345_21028940
transcript_40855.known	chr14	-	2513	1	FSM	ENSG00000165804.16	ENST00000624093.1	2513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTCTGCCTCATATT	-21104124	False	NA	NA	False	ATTAAA	-16	NA	21104216	21101703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21101700_21104200
transcript_40856.known	chr14	-	871	10	FSM	ENSG00000165795.25	ENST00000555869.5	871	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	49.9498513943834	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAACAAGTGGGTGGGCT	-21024948	False	578	NA	False	NA	NA	NA	21025526	21019647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21019743_21019919_21019977_21020495_21020583_21020783_21020845_21021816_21021880_21022061_21022183_21022391_21022498_21023240_21023322_21024029_21024097_21025393
transcript_40857.known	chr14	+	358	2	FSM	ENSG00000178107.2	ENST00000320322.2	358	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTTTATCAA	21108027	False	NA	NA	False	AATAAA	-23	NA	21108042	21116703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21108160_21116462
transcript_40868.known	chr14	-	1924	10	FSM	ENSG00000092199.19	ENST00000554969.5	1924	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_8	3068.17418663057	3588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTGTATTTTATTATTG	-21168426	True	NA	-13	True	ATTAAA	-37	NA	21269425	21210533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21263666_21263830_21269297
transcript_40889.known	chr14	-	1039	9	FSM	ENSG00000092199.19	ENST00000554383.5	1039	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_8	3108.87539956171	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGATGACCAGGTGAAAAC	-21168443	True	NA	NA	False	AATGAA	-7	NA	21269442	21211417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21268622_21268669_21269297
transcript_40904.nic	chr14	-	2039	8	NIC	ENSG00000092199.19	novel	3165	9	NA	NA	-251	0	combination_of_known_junctions	FALSE	canonical	3	2080	junction_7	2011.2125695709	4452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCCTGGTTTTTTATTT	NA	False	NA	-29	True	AATAAA	-36	NA	21269745	21210549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_4091.known	chr1	+	345	2	FSM	ENSG00000116497.18	ENST00000477248.1	345	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTGTGTGCTTCACATG	32812649	True	NA	NA	False	GATAAA	-18	NA	32817655	32818835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817690_32818524
transcript_40910.known	chr14	-	1371	8	FSM	ENSG00000092199.19	ENST00000557201.5	1371	8	0	0	0	0	multi-exon	FALSE	canonical	3	1574	junction_5	2716.54956719372	3726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAACTGTCTCCAAAATAAT	-21168426	True	NA	-9	True	AATAAA	-19	NA	21269425	21210936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230957_21231073_21233952_21234230_21269297
transcript_40916.known	chr14	-	3301	7	FSM	ENSG00000092199.19	ENST00000336053.10	3301	7	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_6	2035.65572291147	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTAACTTTTTTTATT	-21269483	False	NA	3	True	ATTAAA	-31	NA	21269494	21209135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21269297
transcript_4092.known	chr1	+	417	2	FSM	ENSG00000116497.18	ENST00000474103.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGCTGTGTGCTTCAC	32812731	False	NA	NA	False	GATAAA	-15	NA	32817737	32818832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32817847_32818524
transcript_4093.known	chr1	-	2443	13	FSM	ENSG00000134684.12	ENST00000373477.9	2443	13	0	0	0	0	multi-exon	FALSE	canonical	3	1058	junction_4	71.7431278164598	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGGATGTGAGCTGGAC	-32797092	True	NA	-12	True	AATAAA	-16	NA	32817358	32775238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32776092_32779381_32779524_32780084_32780279_32781047_32781146_32782403_32782540_32786361_32786448_32786939_32787076_32791161_32791255_32797762_32797844_32806481_32806612_32810590_32810767_32810910_32811058_32817187
transcript_40933.known	chr14	-	929	2	FSM	ENSG00000092199.19	ENST00000555127.1	929	2	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACACTGAAAAGAATTTTA	-21168390	True	NA	NA	False	NA	NA	NA	21269389	21262992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21263830_21269297
transcript_40934.known	chr14	-	1790	8	FSM	ENSG00000092199.19	ENST00000553753.5	1790	8	0	0	0	0	multi-exon	FALSE	canonical	3	5281	junction_7	997.361867066087	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCTTATTAAACCAGGAAT	-21168404	True	NA	-61	True	AATAAA	-4	NA	21269403	21210581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_40935.known	chr14	-	1658	9	FSM	ENSG00000092199.19	ENST00000555914.5	1658	9	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_2	2381.63415208445	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGGACCTTTTTTCCTC	-21168405	True	NA	-92	True	NA	NA	NA	21269404	21210612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211564_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21263310_21263337_21269297
transcript_40936.known	chr14	-	1308	8	FSM	ENSG00000092199.19	ENST00000557442.5	1308	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2637.68262545991	1427	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGTACAGTTCTTTTCAT	-21168425	True	NA	5	True	NA	NA	NA	21269424	21210903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213045_21230957_21231073_21233952_21234230_21263310_21263337_21269297
transcript_40937.known	chr14	-	1156	8	FSM	ENSG00000092199.19	ENST00000556628.5	1156	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2699.2800476257	2758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTCTTGTTATGCAG	-21168411	True	NA	5	True	AATAAA	-33	NA	21269410	21210922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21234077_21234230_21263310_21263337_21269297
transcript_40938.known	chr14	-	1252	8	FSM	ENSG00000092199.19	ENST00000556897.5	1252	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_7	2654.45317017518	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAATAAAAAGGATGTA	-21262666	False	NA	-38	True	NA	NA	NA	21262677	21210965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21211307_21211405_21211567_21211809_21211924_21212959_21213118_21230318_21230367_21230996_21231073_21233952_21234230_21262600
transcript_40939.known	chr14	-	915	2	FSM	ENSG00000092201.10	ENST00000555943.1	915	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTTTGAGAAAAATGATCA	-21347402	True	NA	NA	False	AATAAA	-23	NA	21383981	21382974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21383770_21383861
transcript_4094.known	chr1	-	748	6	FSM	ENSG00000121900.19	ENST00000474144.5	748	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_3	88.8828442389193	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGATTCCTGGAGCT	-32900339	True	NA	NA	False	NA	NA	NA	32901352	32894740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895645_32895909_32895970_32898125_32898320_32901222
transcript_40941.known	chr14	-	4433	26	FSM	ENSG00000092201.10	ENST00000216297.7	4433	26	0	0	0	0	multi-exon	FALSE	canonical	3	1308	junction_10	133.961391452911	691	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACCTGTGACCGTTCATT	-21347440	True	NA	-10	True	AATAAA	-32	NA	21384019	21351475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21352819_21353487_21353566_21353702_21353833_21354410_21354541_21357196_21357367_21357926_21358003_21358314_21358428_21359483_21359610_21360414_21360534_21360845_21360973_21361077_21361214_21362196_21362325_21362793_21362948_21363033_21363150_21363232_21363329_21363437_21363504_21364826_21364940_21365069_21365144_21366438_21366530_21368268_21368442_21369203_21369356_21369749_21369897_21370335_21370489_21371873_21372045_21373337_21373431_21383861
transcript_40942.known	chr14	-	888	3	FSM	ENSG00000092201.10	ENST00000555752.1	888	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	891	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGTTGTCACTGTTGTCT	-21347434	True	NA	NA	False	NA	NA	NA	21384013	21372074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21372718_21373337_21373431_21383861
transcript_40947.known	chr14	-	8467	38	FSM	ENSG00000100888.15	ENST00000646647.2	8467	38	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_37	26.1457956401538	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCACTCTTCCTTTGTTCT	-21451811	True	NA	-30	True	AATAAA	-16	NA	21456123	21385198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21430800_21431859_21456031
transcript_40948.known	chr14	-	7422	38	FSM	ENSG00000100888.15	ENST00000430710.8	7422	38	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_36	29.6617158126855	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTCCTTTGTTCTATGTT	-21436046	True	NA	-25	True	AATAAA	-21	NA	21437245	21385193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21386177_21390946_21391064_21391462_21391643_21391832_21391947_21392506_21392810_21393105_21393255_21393475_21394196_21394276_21394486_21394911_21395120_21395297_21395353_21395816_21395893_21397822_21397953_21399601_21399706_21399980_21400071_21400150_21400308_21400412_21400613_21400874_21401072_21401402_21401514_21401956_21402137_21402335_21402504_21403016_21403213_21403452_21403664_21405208_21405465_21405720_21405865_21406855_21407033_21408311_21408556_21408703_21408826_21409850_21409989_21412912_21412997_21414300_21414419_21414937_21414994_21415573_21415643_21415724_21415908_21426127_21426243_21427868_21428255_21428963_21429336_21431810_21431859_21437193
transcript_4095.known	chr1	-	1030	6	FSM	ENSG00000121900.19	ENST00000373463.8	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_5	18.8637217960826	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTGCATGCAGGGG	-32900376	True	NA	-1	True	ATTAAA	-17	NA	32901389	32894594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_32894880_32895304_32895440_32895554_32895744_32895909_32895970_32898125_32898320_32901222
transcript_40956.known	chr14	-	802	2	FSM	ENSG00000165819.12	ENST00000367606.7	802	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCTGTTGCCCAGGCTGG	-21502021	True	NA	NA	False	AATAAA	-13	NA	21511340	21507650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21508236_21511123
transcript_40959.known	chr14	-	545	2	FSM	ENSG00000165819.12	ENST00000545788.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGAGTGGCACTGGGTGTT	-21502023	True	NA	NA	False	AATGAA	-36	NA	21511342	21510654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21510981_21511123
transcript_40961.known	chr14	-	2914	8	FSM	ENSG00000129472.15	ENST00000397762.6	2914	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6.03391773769796	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATACTCCATGTGTCATT	-21474003	True	NA	-9	True	ATTAAA	-22	NA	21476959	21459019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21461304_21462349_21462419_21463655_21463768_21468356_21468450_21468669_21468753_21474866_21474935_21476527_21476600_21476826
transcript_40962.known	chr14	-	1980	11	FSM	ENSG00000165819.12	ENST00000298717.9	1980	11	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	74.5601099784597	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAAGTCCATTCTGGCT	-21502021	True	NA	-11	True	AATAAA	-21	NA	21511340	21498137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21498370_21499024_21499138_21499305_21499372_21499491_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503578_21503663_21503882_21511123
transcript_40963.known	chr14	-	2124	9	FSM	ENSG00000165819.12	ENST00000543235.5	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	147.543002206136	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTATTTAAATAAACATTT	-21501991	True	NA	-46	True	NA	NA	NA	21511310	21498172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501825_21503172_21503578_21503663_21503882_21511123
transcript_40964.known	chr14	-	2030	10	FSM	ENSG00000165819.12	ENST00000537163.5	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	143.148545828589	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACATTTGTATTGTAGTT	-21502021	True	NA	-35	True	TTTAAA	-1	NA	21511340	21498161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21498370_21499024_21499601_21499763_21499803_21500494_21500683_21500912_21501130_21501727_21501904_21503172_21503292_21503505_21503578_21503663_21503882_21511123
transcript_40965.known	chr14	-	1592	4	FSM	ENSG00000165819.12	ENST00000536201.5	1592	4	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	70.0587055420111	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCCCTTTTTATTTTCCC	-21502021	True	NA	-56	True	NA	NA	NA	21511340	21501151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21501904_21503172_21503578_21503663_21503882_21511123
transcript_40966.known	chr14	-	1466	3	FSM	ENSG00000165821.12	ENST00000611430.4	1466	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	163	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACATAGTGTGCAGAGGTG	-21526485	False	NA	NA	False	NA	NA	NA	21526500	21521536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21522245_21525336_21525655_21526060
transcript_40967.known	chr14	-	1566	3	FSM	ENSG00000165821.12	ENST00000613414.4	1566	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTTATGTGTTTCTCC	-21536895	False	10041	-7	True	ATTAAA	-13	NA	21536934	21521082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21522245_21525336_21525655_21536848
transcript_40970.known	chr14	-	4861	2	FSM	ENSG00000165821.12	ENST00000537235.2	4861	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATGTGTTTCTCCTTA	-21516848	True	NA	-4	True	ATTAAA	-16	NA	21526346	21521079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21525655_21526060
transcript_40971.known	chr14	-	4942	2	FSM	ENSG00000165821.12	ENST00000614342.1	4942	2	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTATGTGTTTCTCCTT	-21527175	True	NA	-5	True	ATTAAA	-15	NA	21537216	21521080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_21525655_21536848
transcript_40972.known	chr14	+	519	2	FSM	ENSG00000211777.2	ENST00000390425.2	519	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGATAGGGGCTGCAG	NA	False	NA	NA	False	NA	NA	NA	21723712	21724321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_21723935_21724024
transcript_40974.known	chr14	+	440	2	FSM	ENSG00000211798.3	ENST00000390446.3	440	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGGGAGGGACTGCAG	22003088	False	NA	NA	False	NA	NA	NA	22003105	22003673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22003257_22003384
transcript_40975.known	chr14	-	386	3	FSM	ENSG00000259054.1	ENST00000557232.1	386	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGGCCTCAGGCCTGTGT	NA	False	NA	NA	False	AATATA	-20	NA	22557062	22556310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22556523_22556791_22556854_22556950
transcript_4098.nnic	chr1	+	1072	3	NNC	ENSG00000121905.10	novel	503	2	NA	NA	-467	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGGGTGGTGGGGGA	NA	False	NA	20	True	AATAAA	-17	NA	32893056	32894646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_32893141_32893523_32893630_32893764
transcript_40983.known	chr14	-	684	3	FSM	ENSG00000129562.11	ENST00000250498.9	684	3	0	0	0	0	multi-exon	FALSE	canonical	3	1823	junction_2	117.5	19447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568737	True	NA	-6	True	ATTAAA	-20	NA	22589224	22564906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22575058_22575234_22588946
transcript_40993.known	chr14	-	501	3	FSM	ENSG00000129562.11	ENST00000543337.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1029	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAACAACTTTCTAACAAAC	-22568735	True	NA	-103	True	NA	NA	NA	22589222	22565003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22575058_22575234_22589030
transcript_40994.known	chr14	-	591	3	FSM	ENSG00000129562.11	ENST00000535847.1	591	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	1026.5	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATATGCCTCTGGCTCTGTT	-22568733	True	NA	-6	True	ATTAAA	-20	NA	22589220	22564906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22575058_22575234_22589035
transcript_40996.known	chr14	-	441	2	FSM	ENSG00000129562.11	ENST00000538631.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATATGCCTCTGGCTCTGT	-22568670	True	NA	-7	True	ATTAAA	-45	NA	22589157	22564907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22565138_22588946
transcript_40998.known	chr14	-	438	1	FSM	ENSG00000242061.1	ENST00000490836.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATCTAATATACAAGCT	NA	False	NA	NA	False	AATACA	-33	NA	22694535	22694097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22694100_22694500
transcript_41.known	ERCC-00092	+	1108	1	FSM	ERCC-00092A	DQ459425	1108	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1535	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00092_+_0_1100
transcript_41001.known	chr14	+	1750	10	FSM	ENSG00000155463.14	ENST00000358043.5	1750	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	275.111470112851	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGTAGCCAAGTGATCTT	22756180	True	NA	-40	True	NA	NA	NA	22766718	22771730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22767052_22767247_22767410_22767957_22768172_22769790_22769935_22770192_22770279_22770460_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_4101.nic	chr1	+	1390	2	ISM	ENSG00000121905.10	ENST00000373467.4	1412	4	6631	0	-402	0	3prime_fragment	FALSE	canonical	3	12	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGCTGGGTGGTGGGGGA	32893017	True	NA	20	True	AATAAA	-17	NA	32893121	32894646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_32893630_32893764
transcript_41015.known	chr14	-	380	2	FSM	ENSG00000258458.8	ENST00000554730.1	380	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTAAGCCACTAAGTTGT	-22766447	True	NA	NA	False	AATAAA	-14	NA	22766530	22764384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22764658_22766423
transcript_41017.known	chr14	+	1679	9	FSM	ENSG00000155463.14	ENST00000495424.5	1679	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	290.16536233672	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCACAGAGTTAGTAAACCT	22756164	True	NA	-16	True	NA	NA	NA	22766702	22771754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22766765_22767247_22767410_22767957_22768172_22769796_22769935_22770192_22770626_22770804_22770910_22771017_22771181_22771267_22771349_22771433
transcript_41018.known	chr14	-	2098	11	FSM	ENSG00000155465.20	ENST00000397528.8	2098	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	4.99599839871872	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTCTCCTTTAGAGAGACA	-22815874	False	NA	-71	True	TTTAAA	-24	NA	22815898	22773289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22815830
transcript_41019.known	chr14	-	2272	11	FSM	ENSG00000155465.20	ENST00000555702.5	2272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	5.3851648071345	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAGTGGCTTCATTTTA	-22819785	True	NA	-3	True	AATAAA	-17	NA	22819811	22773221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319_22815452_22819637
transcript_4102.known	chr1	+	503	2	FSM	ENSG00000121905.10	ENST00000470896.1	503	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTAACTTGTCTTCTTT	32893419	False	NA	NA	False	NA	NA	NA	32893523	32898441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_32893630_32898044
transcript_41022.known	chr14	-	2447	10	FSM	ENSG00000155465.20	ENST00000397532.9	2447	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4.15739709641549	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTCTGAGTGGCTTCATT	-22815779	False	NA	-6	True	AATAAA	-14	NA	22815803	22773224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22773717_22773932_22774117_22774353_22774504_22775443_22775541_22775832_22775937_22776194_22776319_22778792_22778938_22779925_22780052_22812899_22813441_22815319
transcript_41026.known	chr14	+	362	4	FSM	ENSG00000172590.18	ENST00000556654.5	362	4	0	0	0	0	multi-exon	FALSE	canonical	2	56	junction_1	760.65950916878	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807214	True	NA	17	True	AATAAA	-25	NA	22829886	22834346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22829941_22830186_22830255_22833417_22833483_22834171
transcript_41031.known	chr14	+	333	4	FSM	ENSG00000172590.18	ENST00000397505.2	333	4	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_3	775.654992033615	1580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807240	True	NA	18	True	AATAAA	-26	NA	22829912	22834347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22829941_22830049_22830111_22830186_22830255_22834171
transcript_41032.known	chr14	+	398	5	FSM	ENSG00000172590.18	ENST00000556840.5	398	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	674.943886556505	10048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCTCTGGATTTCTTT	22807248	True	NA	18	True	AATAAA	-26	NA	22829920	22834347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22829949_22830049_22830111_22830186_22830255_22833417_22833483_22834171
transcript_41033.known	chr14	+	451	5	FSM	ENSG00000172590.18	ENST00000555536.1	451	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_3	816.953793062986	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTCTCTGGATTTCTT	22807376	False	NA	17	True	AATAAA	-25	NA	22830048	22834346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22830111_22830186_22830255_22830963_22831038_22833417_22833490_22834171
transcript_41034.known	chr14	+	3701	10	FSM	ENSG00000157227.14	ENST00000311852.11	3701	10	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_4	5.61303597347337	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	22828825	True	NA	19	True	AATAAA	-13	NA	22836584	22847758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842409_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_41036.known	chr14	+	3532	10	FSM	ENSG00000157227.14	ENST00000680097.1	3532	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.0661094620007	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTTGTGTGGCTGAGCTC	22828825	True	NA	19	True	AATAAA	-13	NA	22836584	22847758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22836926_22841490_22841640_22841912_22842036_22842578_22842718_22843256_22843419_22843709_22843871_22844370_22844510_22844629_22844781_22845250_22845367_22845707
transcript_41037.known	chr14	+	412	2	FSM	ENSG00000157227.14	ENST00000547279.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGCGCTGTCCCGGCTCC	22828860	True	NA	NA	False	GATAAA	-20	NA	22836619	22837286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_22836926_22837180
transcript_41043.known	chr14	-	2418	17	FSM	ENSG00000100462.16	ENST00000397441.6	2418	17	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_16	210.789281259152	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGCCCCCTGCCACTA	-22920542	True	NA	-2	True	AATAAA	-24	NA	22929401	22920524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929166
transcript_41044.known	chr14	-	2271	16	FSM	ENSG00000100462.16	ENST00000216350.12	2271	16	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_14	293.933098964146	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGACCATGCTGCCCCCTGC	-22920532	True	NA	-7	True	AATAAA	-19	NA	22929391	22920529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927615_22928496_22928616_22929166
transcript_41049.known	chr14	-	10007	14	FSM	ENSG00000100461.18	ENST00000359890.8	10007	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_11	55.4387555894049	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTGGGAGTGAGGGTTT	-22915461	True	NA	NA	False	AATAAA	-19	NA	22919149	22893203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22908332_22908381_22909482_22909596_22911327_22911404_22918998
transcript_41056.known	chr14	-	2430	13	FSM	ENSG00000100461.18	ENST00000399922.6	2430	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_10	34.2121648280582	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAAGCCTCCTCCTTGTGG	-22915494	True	NA	-32	True	CATAAA	-41	NA	22919182	22900765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_41064.known	chr14	-	2361	12	FSM	ENSG00000100461.18	ENST00000346528.9	2361	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	66.1098509807291	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTACAAAAGGCAAGCCT	-22915490	True	NA	-43	True	CATAAA	-30	NA	22919178	22900776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22906194_22906369_22909482_22909596_22911327_22911404_22918998
transcript_41067.known	chr14	-	1743	12	FSM	ENSG00000100461.18	ENST00000542016.6	1743	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	65.6330898201421	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTCAAGGAAAACCCTTAG	-22915490	True	NA	NA	False	NA	NA	NA	22919178	22901335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22901734_22901813_22901884_22901979_22902100_22902186_22902383_22904260_22904327_22904874_22905013_22905093_22905247_22905335_22905454_22905605_22905660_22906194_22906369_22911327_22911404_22918998
transcript_41075.known	chr14	-	328	2	FSM	ENSG00000100461.18	ENST00000553777.1	328	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAGAAAAAACTACCA	-22915399	True	NA	NA	False	AATACA	-20	NA	22919087	22917563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22917803_22918998
transcript_41076.known	chr14	-	2304	17	FSM	ENSG00000100462.16	ENST00000324366.13	2304	17	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_14	81.1553053949648	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCATGCTGCCCCCTGCC	-22920517	True	NA	-6	True	AATAAA	-20	NA	22929376	22920528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22921057_22922175_22922241_22922442_22922560_22922741_22922836_22923050_22923161_22924007_22924184_22924269_22924393_22924478_22924538_22924631_22924710_22924878_22925041_22926132_22926297_22926505_22926556_22926701_22926815_22927525_22927661_22928125_22928212_22928496_22928616_22929251
transcript_41077.known	chr14	-	580	5	FSM	ENSG00000100462.16	ENST00000553550.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	371.688966072441	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGTACTGTGTGGTGC	-22920533	True	NA	NA	False	NA	NA	NA	22929392	22924637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22924710_22924878_22925041_22928125_22928212_22928496_22928616_22929251
transcript_41079.nic	chr14	-	1811	10	NIC	ENSG00000092036.19	novel	1642	10	NA	NA	1	0	intron_retention	FALSE	canonical	3	41	junction_9	70.3916731888154	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953271	True	NA	-32	True	AATAAA	-12	NA	22957153	22946235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_4108.known	chr1	-	886	7	FSM	ENSG00000004455.17	ENST00000550338.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_6	616.846122536965	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGACTTGGTTATGTTT	-33016832	True	NA	NA	False	NA	NA	NA	33036902	33013206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33031543_33031662_33036735
transcript_41080.nnic	chr14	-	1760	10	NNC	ENSG00000092036.19	novel	1642	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	3	junction_9	81.4466423835603	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953267	True	NA	-32	True	AATAAA	-12	NA	22957149	22946235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956792
transcript_41081.known	chr14	-	1586	10	FSM	ENSG00000092036.19	ENST00000541587.6	1586	10	0	0	0	0	multi-exon	FALSE	canonical	3	153	junction_9	40.8275506109403	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953208	True	NA	-24	True	AATAAA	-20	NA	22957090	22946227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_41082.known	chr14	-	1642	10	FSM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_9	57.2139152546427	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953272	True	NA	-24	True	AATAAA	-20	NA	22957154	22946227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_41085.known	chr14	-	1447	9	FSM	ENSG00000092036.19	ENST00000490506.5	1447	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	80.3877322730278	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTTTAGTCATTTTCCTT	-22953212	True	NA	-24	True	AATAAA	-20	NA	22957094	22946227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22951554_22951690_22952327_22952460_22955099_22955177_22956915
transcript_41086.known	chr14	-	1626	9	FSM	ENSG00000092036.19	ENST00000555986.5	1626	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	88.1616944880258	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGATTATCTCCTGAAT	-22953255	True	NA	-66	True	NA	NA	NA	22957137	22946269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_41087.known	chr14	-	1454	9	FSM	ENSG00000092036.19	ENST00000555367.5	1454	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	66.3474519103786	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCTGAATAAAGTTATG	-22953244	True	NA	-57	True	NA	NA	NA	22957126	22946260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_41088.known	chr14	-	1474	9	FSM	ENSG00000092036.19	ENST00000342454.12	1474	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	77.6140290153784	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953247	True	NA	-32	True	AATAAA	-12	NA	22957129	22946235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22947867_22948014_22950313_22950411_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_4109.known	chr1	-	936	6	FSM	ENSG00000004455.17	ENST00000548033.5	936	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	530.08889820482	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCTCAGAACCCCATGG	-33016770	True	NA	NA	False	TTTAAA	-24	NA	33036840	33010477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_41094.known	chr14	-	1428	7	FSM	ENSG00000092036.19	ENST00000347758.6	1428	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	118.119525152374	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATCTTAGGATTTTAGTCA	-22953266	True	NA	-32	True	AATAAA	-12	NA	22957148	22946235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22946709_22947170_22947240_22947600_22947732_22952327_22952460_22952540_22952684_22955099_22955177_22956745
transcript_41103.nic	chr14	-	790	5	ISM	ENSG00000092036.19	ENST00000557591.5	582	7	-94	1097	-1	0	intron_retention	FALSE	canonical	3	153	junction_4	52.3115665986023	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTTGTCAAGCTTT	-22953273	True	NA	-3	True	AATAAA	-34	NA	22957155	22951491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956915
transcript_41104.nic	chr14	-	781	5	ISM	ENSG00000092036.19	ENST00000206474.11	1642	10	0	5264	0	0	5prime_fragment	FALSE	canonical	3	88	junction_4	77.2410998109167	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTTTTGTCAAGCTTT	-22953272	True	NA	-3	True	AATAAA	-34	NA	22957154	22951491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_22951690_22952327_22952460_22952540_22952684_22955099_22955177_22956923
transcript_41108.known	chr14	-	1949	8	FSM	ENSG00000100802.15	ENST00000397379.7	1949	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	23.8678333618231	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTCTGAGAAAGCAAAT	-23009706	True	NA	58	True	GGGGCT	-24	NA	23010128	22987122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999157_23000958_23001038_23010100
transcript_41109.known	chr14	-	1776	8	FSM	ENSG00000100802.15	ENST00000397377.5	1776	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	21.5832512540136	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAAAATAATGAGATGCTC	-23009700	False	NA	36	True	GGGGCT	-2	NA	23010122	22987144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22998742_22999053_22999403_23010100
transcript_41110.known	chr14	-	3360	7	FSM	ENSG00000100802.15	ENST00000299088.11	3360	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	17.4164673034842	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATGGTTCGACTTAGGATT	-23009721	True	NA	NA	False	AATAAA	-37	NA	23010143	22985893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_22987635_22987902_22988016_22989741_22989846_22990065_22990128_22995947_22996269_22998426_22999403_23010100
transcript_41117.known	chr14	-	1625	1	FSM	ENSG00000280129.1	ENST00000623843.1	1625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTGGTGTCTCCTCTTTTT	-23006701	False	422	NA	False	AATAAA	-19	NA	23007123	23005498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23005500_23007100
transcript_41120.known	chr14	-	1044	3	FSM	ENSG00000100804.19	ENST00000361611.11	1044	3	0	0	0	0	multi-exon	FALSE	canonical	3	3047	junction_2	58.5	23555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCCTGTGTTGCATCT	-23015350	True	NA	-6	True	NA	NA	NA	23034900	23025855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23033367_23033675_23034683
transcript_41133.known	chr14	-	796	3	FSM	ENSG00000100804.19	ENST00000334454.10	796	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_2	1573	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTCATGGATCGGGGCT	-23015335	True	NA	NA	False	NA	NA	NA	23034885	23026296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23033367_23033675_23034475
transcript_4114.known	chr1	-	5059	5	FSM	ENSG00000004455.17	ENST00000354858.11	5059	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	562.366595291719	583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGACTGGGTGAGCTATTGT	NA	False	NA	-15	True	AATAAA	-6	NA	33037004	33008891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33036735
transcript_41142.known	chr14	-	729	2	FSM	ENSG00000100804.19	ENST00000460922.2	729	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015344	True	NA	-8	True	NA	NA	NA	23034894	23025857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23034683
transcript_41143.known	chr14	-	444	3	FSM	ENSG00000100804.19	ENST00000555895.5	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	1498.5	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTTTGTTTGTTTGTTT	-23034665	False	NA	-3	True	AATAAA	-16	NA	23034727	23016542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23016636_23033367_23033675_23034683
transcript_41144.known	chr14	-	1117	4	FSM	ENSG00000100804.19	ENST00000493471.2	1117	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	1345.9323905754	816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCAGCCTGTGTTGCAT	-23015340	True	NA	-8	True	NA	NA	NA	23034890	23025857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23027744_23027830_23033367_23033675_23034683
transcript_41145.known	chr14	-	900	3	FSM	ENSG00000100804.19	ENST00000425762.2	900	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	1559.5	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTACTTTCTTGGATG	-23035168	True	NA	-15	True	NA	NA	NA	23035230	23025901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23026376_23033367_23033675_23035111
transcript_41147.known	chr14	-	4935	19	FSM	ENSG00000100813.15	ENST00000262710.5	4935	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_15	168.303380173358	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23089981_23090102_23090521_23090634_23093478_23093545_23094974
transcript_41149.known	chr14	-	2563	13	FSM	ENSG00000100813.15	ENST00000357481.6	2563	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	148.522070937472	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	-23067885	True	NA	-6	True	AATAAA	-17	NA	23071617	23058566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124_23071187_23071426
transcript_41151.known	chr14	-	2738	12	FSM	ENSG00000100813.15	ENST00000397341.7	2738	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_11	109.210616140034	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGACTTAGTTTTAAACTGT	-23067833	True	NA	-19	True	AATAAA	-4	NA	23071565	23058579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071124
transcript_41152.known	chr14	-	2445	12	FSM	ENSG00000100813.15	ENST00000338631.10	2445	12	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_11	132.429054763124	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	-23067829	True	NA	-6	True	AATAAA	-17	NA	23071561	23058566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23071426
transcript_41156.known	chr14	-	4815	18	FSM	ENSG00000100813.15	ENST00000457657.5	4815	18	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_15	156.21318943557	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACTGTGTGAGTGGCTTTC	NA	False	NA	-6	True	AATAAA	-17	NA	23095614	23058566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23059475_23061083_23061185_23061297_23061623_23062167_23062276_23062415_23062524_23062928_23063075_23063435_23063578_23064104_23064258_23064354_23064489_23065965_23066009_23069475_23069618_23078150_23078267_23078819_23079039_23079546_23080810_23081747_23081837_23090521_23090634_23093478_23093545_23094974
transcript_41165.known	chr14	+	725	2	FSM	ENSG00000179933.6	ENST00000554203.1	725	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATCAATCTAAGCAATCCA	23084159	True	NA	NA	False	NA	NA	NA	23095524	23098271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23095620_23097641
transcript_41172.known	chr14	+	2914	2	FSM	ENSG00000179933.6	ENST00000319074.6	2914	2	0	0	0	0	multi-exon	FALSE	canonical	3	1222	junction_1	0	4394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGGACTCCATGGATTTGA	23084139	True	NA	10	True	AATAAA	-15	NA	23095504	23100456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23095620_23097657
transcript_41174.known	chr14	-	4236	11	FSM	ENSG00000092068.21	ENST00000316902.12	4236	11	0	0	0	0	multi-exon	FALSE	canonical	3	3847	junction_2	128.382864900266	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGGTGTTGGTAATTA	-23142248	True	NA	29	True	AATAAA	-19	NA	23183660	23125294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23165284_23165437_23166335_23166541_23182763
transcript_41177.known	chr14	-	1752	9	FSM	ENSG00000092068.21	ENST00000453702.5	1752	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	1352.84829156857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCCTCCCCATCATACC	-23154199	True	NA	NA	False	NA	NA	NA	23154401	23126667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23127344_23128018_23128197_23129649_23129800_23131460_23131558_23137920_23138025_23139423_23139548_23140470_23140625_23143078_23143205_23154258
transcript_41180.known	chr14	-	658	3	FSM	ENSG00000092068.21	ENST00000525062.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	2145.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATTGTGACGGGCTTCAT	-23142238	True	NA	NA	False	NA	NA	NA	23183650	23166457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23166541_23182763_23183039_23183350
transcript_41187.known	chr14	+	2145	10	FSM	ENSG00000258643.6	ENST00000678502.1	2145	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1514.88870959854	690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGTGTAAGGATTATTTA	23305247	True	NA	20	True	AATAAA	-33	NA	23306832	23326175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23319734_23319831_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_4119.known	chr1	-	3597	7	FSM	ENSG00000004455.17	ENST00000373449.7	3597	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	286.414278430544	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTTCTGCATGCATTATC	-33016813	True	NA	-6	True	ATTAAA	-16	NA	33036883	33007985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_41190.known	chr14	+	1241	9	FSM	ENSG00000258643.6	ENST00000553781.5	1241	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1475.94713235265	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAGATGACCTTGATGGA	23305249	True	NA	80	True	ATTAAA	-18	NA	23306834	23325369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23322180_23322296_23322998_23323067_23323376_23323484_23323964_23324053_23324137_23324290_23325246
transcript_4120.known	chr1	-	2840	8	FSM	ENSG00000004455.17	ENST00000672308.1	2840	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	615.188174297847	2015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAAGGGACTCTTTTAA	-33016793	True	NA	-53	True	NA	NA	NA	33036863	33010118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33011447_33011711_33012073_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_41203.known	chr14	+	589	5	FSM	ENSG00000100836.11	ENST00000554062.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1367.72006912964	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAACTACAACAGCTCCC	23322470	False	NA	NA	False	NA	NA	NA	23322538	23324217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23322785_23322998_23323067_23323376_23323484_23323964_23324053_23324137
transcript_41204.known	chr14	-	690	5	FSM	ENSG00000235194.9	ENST00000561437.1	690	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGTGTGCGCAAATCTG	-23301447	False	NA	NA	False	NA	NA	NA	23301475	23298586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23298918_23299400_23299542_23300106_23300140_23300757_23300865_23301397
transcript_41209.known	chr14	+	762	4	FSM	ENSG00000129473.11	ENST00000557579.2	762	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	12.0369800568452	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGGCTTGGTCTGGATTCC	23305247	True	NA	NA	False	NA	NA	NA	23306832	23311144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23310972
transcript_4121.known	chr1	-	811	5	FSM	ENSG00000004455.17	ENST00000480134.5	811	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	573.299823390868	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGGCGTGTGTGCTACT	-33016807	True	NA	-7	True	ATTAAA	-20	NA	33036877	33013043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33013403_33014521_33014595_33021592_33021704_33024441_33024568_33036735
transcript_41215.known	chr14	-	3222	4	FSM	ENSG00000235194.9	ENST00000558058.5	3222	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTACTTGGCCCGCAACCC	-23301458	True	NA	NA	False	NA	NA	NA	23301583	23296034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23298823_23299400_23299542_23300757_23300865_23301397
transcript_41219.nnic	chr14	-	868	3	Antisense	novelGene_ENSG00000215277.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	7.5	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTATAGTCTCTATTTT	NA	False	NA	NA	False	AGTAAA	-38	NA	23207622	23194881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_23195261_23200703_23200863_23207292
transcript_4122.known	chr1	-	880	8	FSM	ENSG00000004455.17	ENST00000467905.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	585.48657594538	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGGAAGGGTGGTCAGGG	-33016816	True	NA	NA	False	NA	NA	NA	33036886	33010754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33010834_33012073_33012123_33013206_33013403_33014521_33014595_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_41222.nnic	chr14	-	988	3	Antisense	novelGene_ENSG00000215277.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	7.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTCTCAAATTTTCAGAG	-23207089	True	NA	-8	True	AATAAA	-14	NA	23207334	23199106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_23199894_23200703_23200863_23207292
transcript_41229.known	chr14	-	4986	2	FSM	ENSG00000215271.9	ENST00000357460.7	4986	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGATGGAGTCTCGCTC	-23285283	True	NA	NA	False	NA	NA	NA	23286132	23272421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23277188_23285912
transcript_4123.known	chr1	-	920	5	FSM	ENSG00000004455.17	ENST00000487289.1	920	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	586.664459039407	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTGTAGTCCATACCTT	-33016774	True	NA	NA	False	NA	NA	NA	33036844	33019682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33020162_33021366_33021462_33021592_33021704_33024441_33024568_33036735
transcript_41230.nic	chr14	-	761	2	ISM	ENSG00000215271.9	ENST00000558278.1	563	3	-44	109	-29	-109	5prime_fragment	FALSE	canonical	3	61	junction_1	0	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTGATGTAGTGGTGAG	NA	False	NA	-7	True	ATTAAA	-20	NA	23286161	23285099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_23285612_23285912
transcript_41231.known	chr14	-	1830	3	FSM	ENSG00000215271.9	ENST00000673724.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGATTCCAGTGCATCC	-23285221	True	NA	NA	False	AGTAAA	-15	NA	23286070	23275182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23276349_23276681_23277188_23285912
transcript_41232.known	chr14	+	3526	4	FSM	ENSG00000129473.11	ENST00000250405.10	3526	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.41629792788369	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGAACAGGGTTTGTGA	23305247	True	NA	11	True	AATAAA	-25	NA	23306832	23311751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23306895_23307191_23307280_23307759_23308200_23308815
transcript_41234.known	chr14	+	718	6	FSM	ENSG00000166091.21	ENST00000649278.1	718	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.26491106406735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAAGCTCTGGCCAGAGG	NA	False	NA	NA	False	NA	NA	NA	23376772	23379669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23376808_23377221_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_41239.known	chr14	+	1200	5	FSM	ENSG00000166091.21	ENST00000359320.7	1200	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGAGTCTCTTTCTTCC	NA	False	NA	NA	False	ATTAAA	-15	NA	23376807	23379772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23377378_23378348_23378502_23379030_23379124_23379298_23379384_23379473
transcript_41244.known	chr14	+	1108	11	FSM	ENSG00000129460.16	ENST00000408901.8	1108	11	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	142.304919099798	5422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAGCCCCTTTTTGCACA	23462779	True	NA	10	True	AATAAA	-19	NA	23469702	23478173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502_23477561_23478006
transcript_41251.known	chr14	+	2204	10	FSM	ENSG00000129460.16	ENST00000397154.7	2204	10	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	149.465302138021	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGCCAGCAGACAAGCAG	23462779	True	NA	NA	False	TATAAA	-28	NA	23469702	23478823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905_23470978_23475170_23475309_23475557_23475643_23475725_23475779_23476028_23476153_23476238_23476408_23477199_23477357_23477502
transcript_41271.known	chr14	+	803	3	FSM	ENSG00000129460.16	ENST00000556378.5	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	189.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGTTCGGGACCAACCTGG	23462765	True	NA	NA	False	NA	NA	NA	23469688	23471609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041_23470102_23470905
transcript_41274.known	chr14	+	270	2	FSM	ENSG00000129460.16	ENST00000557097.5	270	2	0	0	0	0	multi-exon	FALSE	canonical	3	452	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGAAACTCCAAAAAGAAAT	23462775	True	NA	NA	False	NA	NA	NA	23469698	23470282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23469728_23470041
transcript_4128.known	chr1	+	2048	11	FSM	ENSG00000142920.17	ENST00000373443.7	2048	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.48660687473185	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCGGAATCTGGCAGTTTG	33081034	True	NA	9	True	AATAAA	-26	NA	33081166	33120529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_33081295_33081390_33081509_33082177_33082355_33083953_33084128_33092049_33092223_33093281_33093417_33094547_33094714_33096706_33096870_33098066_33098180_33117901_33118117_33120043
transcript_41286.nic	chr14	-	2640	22	NIC	ENSG00000213983.12	novel	2598	22	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_21	87.4608043082696	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23567327	False	NA	-16	True	AATAAA	-33	NA	23567545	23559566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567450
transcript_41287.known	chr14	-	2598	22	FSM	ENSG00000213983.12	ENST00000397120.8	2598	22	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_21	70.0703566087932	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGGGTATATTTGAAGT	-23564710	True	NA	-16	True	AATAAA	-33	NA	23567791	23559566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110_23567320_23567738
transcript_4129.known	chr1	-	3817	5	FSM	ENSG00000116525.14	ENST00000291416.10	3817	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	10.779030568655	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGTTCCATTCATTTTGA	-33180787	True	NA	0	True	ATTAAA	-22	NA	33182043	33145398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33147728_33158252_33158369_33159687_33159945_33165470_33165567_33181024
transcript_4130.known	chr1	-	459	3	FSM	ENSG00000134686.20	ENST00000459964.1	459	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGAGACTTTTTTTCAT	NA	False	NA	NA	False	ATTAAA	-24	NA	33354903	33353212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_33353440_33354400_33354567_33354837
transcript_41338.nnic	chr14	+	1080	3	NNC	ENSG00000259431.6	novel	571	2	NA	NA	-18335	4	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	2	49	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGCTTTATTGGGC	23537152	True	NA	12	True	AATATA	-21	NA	23537652	23559578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_23537752_23542158_23542256_23558694
transcript_41339.known	chr14	+	569	3	FSM	ENSG00000259431.6	ENST00000554970.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	11.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTGCCTCTCCCCTC	23555929	True	NA	NA	False	NA	NA	NA	23556270	23558898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23556742_23557035_23558694
transcript_4134.known	chr1	+	2136	7	FSM	ENSG00000142698.15	ENST00000373374.7	2136	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	9.41039614232874	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGTGTGCCTGTTTATTT	34166867	False	NA	8	True	GATAAA	-19	NA	34166882	34219131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34167172_34197224_34197914_34200771_34201033_34202083_34202260_34208156_34208235_34212209_34212407_34218685
transcript_41340.known	chr14	+	535	3	FSM	ENSG00000259431.6	ENST00000556015.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAAGGGAACTCTGGGTCT	23555929	True	NA	NA	False	NA	NA	NA	23556270	23558859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23556742_23557040_23558694
transcript_41342.known	chr14	+	1779	3	FSM	ENSG00000259431.6	ENST00000404535.3	1779	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	33.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	23555137	True	NA	8	True	AATATA	-17	NA	23556006	23559574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23556742_23557305_23558694
transcript_41343.nnic	chr14	+	1995	3	NNC	ENSG00000259431.6	novel	1779	3	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	47	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACTTCTCAGGCTTTATT	23555179	True	NA	8	True	AATATA	-17	NA	23556048	23559574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_23556344_23556484_23557305_23558694
transcript_41346.known	chr14	+	571	2	FSM	ENSG00000259431.6	ENST00000555446.1	571	2	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	0	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCCCTCAGTGTCCCTTC	23555967	False	NA	NA	False	NA	NA	NA	23555987	23558909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23556344_23558694
transcript_41348.known	chr14	+	3243	4	FSM	ENSG00000258727.1	ENST00000555968.1	3243	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTTCTTTGTATTTTTTT	23561081	False	NA	NA	False	AATATA	-12	NA	23561096	23568073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23561874_23564726_23564841_23565455_23567423_23567688
transcript_41350.known	chr14	-	9296	10	FSM	ENSG00000136367.15	ENST00000419474.5	9296	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	9.81432563421048	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAAGTGTTTTTTTTCCTA	-23549857	True	NA	-1	True	AATACA	-33	NA	23551765	23520856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23522942_23523202_23526680_23526846_23526974_23527603_23527805_23529709_23529769_23530119_23530195_23531480_23531722_23532566_23533085_23533284_23535375_23551342
transcript_41351.known	chr14	+	1595	2	FSM	ENSG00000259431.6	ENST00000554789.1	1595	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCACTTCAAATATACCCAA	23555952	False	NA	-23	True	NA	NA	NA	23556293	23559543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23557040_23558694
transcript_41352.known	chr14	-	3298	21	FSM	ENSG00000213983.12	ENST00000308724.9	3298	21	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_17	64.8013117151189	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGTATATTTGAAGTGG	-23568060	False	NA	-14	True	AATAAA	-35	NA	23568070	23559564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23559851_23559937_23560037_23560254_23560419_23561295_23561432_23561511_23561636_23561961_23562067_23562287_23562416_23562503_23562594_23563379_23563503_23563583_23563639_23563715_23563857_23564045_23564160_23564332_23564389_23564561_23564661_23565118_23565200_23565605_23565702_23565815_23565893_23566063_23566161_23566277_23566420_23566561_23566687_23567110
transcript_41353.known	chr14	-	2447	3	FSM	ENSG00000092051.18	ENST00000553505.1	2447	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	57	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACAAAAAGAAGCCAG	-23577599	False	NA	NA	False	TTTAAA	-19	NA	23578570	23574950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23576457_23577074_23577625_23578179
transcript_41354.known	chr14	-	561	2	FSM	ENSG00000213983.12	ENST00000553685.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAGAGTGATGAGATATGA	-23564707	True	NA	NA	False	NA	NA	NA	23567788	23566808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23567320_23567738
transcript_41356.known	chr14	+	1678	9	FSM	ENSG00000100867.15	ENST00000344777.11	1678	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.3228756555323	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGAAGCATCTGTCAAG	23636254	False	NA	6	True	AATAAA	-18	NA	23636372	23645639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23636773_23638826_23639005_23639178_23639357_23639793_23639896_23643151_23643220_23644110_23644163_23644408_23644555_23644826_23644883_23645141
transcript_41362.known	chr14	-	2830	4	FSM	ENSG00000215256.5	ENST00000671411.1	2830	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	8.99382504215469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAATAAATTTATTTAGTTT	-23953277	True	NA	-37	True	AATGAA	-24	NA	23954186	23938761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953308_23953420_23953773_23954034_23954124
transcript_41365.nnic	chr14	-	597	4	NNC	ENSG00000215256.5	novel	1142	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.56846672960488	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTTTATGAACTGTAAGC	NA	False	NA	NA	False	AATAAA	-19	NA	23954204	23952985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_23953132_23953308_23953420_23953773_23954034_23954124
transcript_41366.known	chr14	-	2759	3	FSM	ENSG00000215256.5	ENST00000555045.2	2759	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	15	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTATGGCTTCTGAGTTT	NA	False	NA	-15	True	AATAAA	-15	NA	23954204	23938739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953773_23954034_23954124
transcript_41372.known	chr14	-	2852	2	FSM	ENSG00000215256.5	ENST00000556379.2	2859	2	7	0	-4	0	multi-exon	FALSE	canonical	3	52	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGAGTTTTGTGTCATG	-23953288	True	NA	-6	True	AATAAA	-24	NA	23954197	23938730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953773
transcript_41373.known	chr14	-	1492	2	FSM	ENSG00000215256.5	ENST00000553454.1	1492	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCACAAGCCTCACCAAAG	-23953213	True	NA	NA	False	AATAAA	-8	NA	23954122	23940215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_23941159_23953573
transcript_4138.known	chr1	-	897	2	FSM	ENSG00000163866.9	ENST00000423898.1	897	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAGGAGGGATACCTGCA	-34851496	True	NA	-87	True	NA	NA	NA	34859717	34855348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34855983_34859454
transcript_41381.known	chr14	+	1264	8	FSM	ENSG00000157326.19	ENST00000313250.10	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_5	37.2881772585535	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23951419	True	NA	NA	False	AATAAA	-31	NA	23953769	23969279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_4139.known	chr1	-	918	2	FSM	ENSG00000163866.9	ENST00000456842.1	918	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTGTTCACTTTGGGGCA	-34851534	True	NA	93	True	NA	NA	NA	34859755	34855168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34855983_34859651
transcript_41390.known	chr14	+	1143	7	FSM	ENSG00000157326.19	ENST00000558581.5	1143	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	61.4455495178907	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23951438	True	NA	NA	False	AATAAA	-31	NA	23953788	23969279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23966282_23966418_23967210_23967267_23968756
transcript_41395.known	chr14	+	1003	6	FSM	ENSG00000157326.19	ENST00000559632.5	1003	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	83.8746684047097	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951438	True	NA	NA	False	AATAAA	-26	NA	23953788	23969274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23965761_23965833_23965931_23965984_23967210_23967267_23968756
transcript_4140.known	chr1	+	1355	2	FSM	ENSG00000189280.3	ENST00000338513.1	1355	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGTGCCCTCTGGTTGT	34754975	True	NA	2	True	AATAAA	-20	NA	34755046	34758512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34755196_34757306
transcript_41400.known	chr14	+	727	5	FSM	ENSG00000157326.19	ENST00000397075.7	727	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	58.6190028915539	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCCCTGCCGTCAAGGT	23951428	True	NA	NA	False	NA	NA	NA	23953778	23969009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23959901_23960004_23967210_23967267_23968756
transcript_41403.nnic	chr14	+	858	4	NNC	ENSG00000157326.19	novel	1340	4	NA	NA	-2	-3153	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_3	78.3964284900785	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGTTTCAATGGTTCATT	23951381	True	NA	NA	False	TATAAA	-21	NA	23953731	23964970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_23953917_23955034_23955213_23959901_23960004_23964577
transcript_41404.known	chr14	+	785	4	FSM	ENSG00000157326.19	ENST00000397074.7	785	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	84.0092587489948	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGAGAGAAGGAACCTGG	23951435	True	NA	NA	False	NA	NA	NA	23953785	23969176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23953917_23955034_23955213_23967210_23967267_23968756
transcript_41405.nic	chr14	+	694	2	ISM	ENSG00000157326.19	ENST00000543741.6	1340	4	-38	12580	-2	-12580	5prime_fragment	FALSE	canonical	3	190	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAGAGTCAAGTCCCT	23951381	True	NA	12	True	AATAAA	-18	NA	23953731	23955543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_23953917_23955034
transcript_41409.nnic	chr14	+	1291	8	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	1264	8	NA	NA	3	0	multi-exon	FALSE	canonical	3	38	junction_5	61.3021955860756	141	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951386	True	NA	NA	False	AATAAA	-26	NA	23953736	24006403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_4141.known	chr1	+	1621	2	FSM	ENSG00000187513.9	ENST00000342280.5	1621	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGTGTGTATTGATGCTA	34792860	True	NA	6	True	AATAAA	-17	NA	34792998	34795747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34793069_34794196
transcript_41411.known	chr14	+	1258	8	FSM	ENSG00000187630.18	ENST00000335125.11	1258	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	59.2476642095342	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23988584	True	NA	NA	False	AATAAA	-26	NA	23988928	24006403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_41415.nnic	chr14	+	1189	7	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	1143	7	NA	NA	3	0	multi-exon	FALSE	canonical	3	10	junction_2	73.2325064435186	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951386	True	NA	NA	False	AATAAA	-26	NA	23953736	24006403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_24000862_24000934_24001032_24001085_24001383_24001518_24004336_24004393_24005885
transcript_4142.known	chr1	+	1059	2	FSM	ENSG00000187513.9	ENST00000450137.1	1059	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCTGACCACAGAGGAGAGG	34792860	True	NA	NA	False	NA	NA	NA	34792998	34795090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_34793069_34794101
transcript_41424.nnic	chr14	+	1034	5	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	727	5	NA	NA	3	0	multi-exon	FALSE	canonical	3	48	junction_3	61.3529746630104	210	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951386	True	NA	NA	False	AATAAA	-26	NA	23953736	24006403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_23959901_23960004_24004336_24004393_24005885
transcript_41429.known	chr14	+	1117	5	FSM	ENSG00000187630.18	ENST00000397071.5	1117	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	78.0032050623563	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACCTGTTCATTTCTCAG	23988473	True	NA	NA	False	AATAAA	-31	NA	23988817	24006408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_23989076_23990181_23990360_23995031_23995134_24004336_24004393_24005885
transcript_41432.nnic	chr14	+	932	4	Fusion	ENSG00000157326.19_ENSG00000187630.18	novel	1340	4	NA	NA	3	0	multi-exon	FALSE	canonical	2	16	junction_2	85.2538692507397	117	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAATTGACCTGTTCATTT	23951386	True	NA	NA	False	AATAAA	-26	NA	23953736	24006403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_23953917_23955034_23955213_24004336_24004393_24005885
transcript_41440.nic	chr14	+	727	2	ISM	ENSG00000187630.18	ENST00000558753.5	556	4	-30	13702	-30	-10387	5prime_fragment	FALSE	canonical	3	25	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAGAGTCAAGTCCCT	23988513	True	NA	NA	False	AATAAA	-18	NA	23988857	23990690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_23989076_23990181
transcript_41441.nic	chr14	+	2663	17	NIC	ENSG00000100897.18	novel	2711	15	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_1	123.831538793637	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24110750	True	NA	16	True	AATAAA	-16	NA	24114773	24124029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24114925_24115205_24115294_24115381_24115393_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41448.nic	chr14	+	2555	15	NIC	ENSG00000100897.18	novel	2711	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	48	junction_2	116.636908255264	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114759	24124029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24114925_24115542_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41449.nic	chr14	+	2500	15	NIC	ENSG00000100897.18	novel	2711	15	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	119.827682400136	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114759	24124029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24114925_24115542_24115727_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41450.known	chr14	+	2711	15	FSM	ENSG00000100897.18	ENST00000559115.5	2711	15	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_1	84.2026527770585	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	NA	False	NA	16	True	AATAAA	-16	NA	24114626	24124029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24114925_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41457.known	chr14	+	2570	15	FSM	ENSG00000100897.18	ENST00000326009.9	2570	15	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	102.973941621467	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24113051	True	NA	16	True	AATAAA	-16	NA	24115274	24124029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24115294_24115381_24115727_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41458.known	chr14	+	4304	15	FSM	ENSG00000100897.18	ENST00000446197.8	4304	15	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	61.9410516342031	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTTCTGTGTTCTC	24110753	True	NA	12	True	AATAAA	-24	NA	24114776	24125242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24115294_24115381_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_4146.known	chr1	-	2702	4	FSM	ENSG00000163867.17	ENST00000317538.9	2702	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	32.5678778348646	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTTACCATTGAATA	-35031095	False	NA	0	True	ATTAAA	-25	NA	35031905	35017243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35019603_35020382_35020468_35030546_35030714_35031814
transcript_41460.nic	chr14	+	2488	15	NIC	ENSG00000100897.18	novel	2402	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_1	89.6608405410668	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCAGTGTCTGTCTCTCTC	24114975	True	NA	16	True	AATAAA	-16	NA	24115317	24124029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24115393_24115542_24115750_24116916_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41467.known	chr14	+	2342	14	FSM	ENSG00000100897.18	ENST00000558914.5	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	103.440689921138	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGTGGGGATTATGTCT	24114983	True	NA	NA	False	NA	NA	NA	24115325	24123796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24115750_24116971_24117045_24117265_24117394_24117667_24117733_24118054_24118156_24118387_24118535_24118749_24118805_24119144_24119214_24119558_24119617_24119710_24119897_24120837_24120992_24121364_24121518_24122970_24123078_24123174
transcript_41471.known	chr14	+	2179	10	FSM	ENSG00000100889.12	ENST00000216780.9	2179	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_7	27.8159737392335	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087919	True	NA	13	True	NA	NA	NA	24094310	24104125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103509
transcript_41472.nic	chr14	+	1855	10	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_9	82.0881790259869	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	24087911	True	NA	13	True	NA	NA	NA	24094302	24104125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994_24100214_24102752_24102891_24103159_24103256_24103841
transcript_41481.nnic	chr14	+	2139	9	NIC	ENSG00000100889.12	novel	2179	10	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_6	82.996987897152	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAGATTTGTGCTGTTTT	NA	False	NA	13	True	NA	NA	NA	24094131	24104125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24102752_24102891_24103159_24103256_24103509
transcript_41489.known	chr14	+	1830	7	FSM	ENSG00000100889.12	ENST00000396973.8	1830	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	27.8612634315101	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGGCTGGATTTTTTTTT	NA	False	NA	NA	False	AATAAA	-1	NA	24094158	24100562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24094435_24096891_24097138_24098202_24098388_24098474_24098679_24099048_24099237_24099557_24099721_24099994
transcript_41514.known	chr14	-	872	5	FSM	ENSG00000100908.14	ENST00000560403.5	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	154.180089505746	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140586	False	4372	-10	True	AATAAA	-15	NA	24141570	24138964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139790_24140888_24140966_24141347
transcript_4152.known	chr1	-	922	3	FSM	ENSG00000243749.1	ENST00000373337.3	922	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	18.5	1601	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGTCTCTTTTGCCTC	-34983192	True	NA	-9	True	TATAAA	-12	NA	34985353	34981534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34982120_34983766_34983948_34985197
transcript_4153.known	chr1	-	3099	17	FSM	ENSG00000271741.1	ENST00000487874.1	3099	17	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	38.2800127351076	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTCTCTTTTGCCTCAT	-35030931	False	NA	-7	True	TATAAA	-14	NA	35031741	34981532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_34982120_34983766_34983948_34992233_34992388_35003967_35004006_35005131_35005273_35006950_35007099_35008751_35008925_35010446_35010598_35010757_35011037_35011889_35012006_35012430_35012582_35014696_35014889_35014987_35015163_35019352_35019603_35020382_35020468_35030546_35030714_35031630
transcript_41531.known	chr14	+	1136	10	FSM	ENSG00000092010.15	ENST00000382708.7	1136	10	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_4	38.146242311257	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCCAAGTCTCTTTATT	24129643	True	NA	21	True	AATAAA	-21	NA	24136199	24138964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473
transcript_41532.known	chr14	+	1033	11	FSM	ENSG00000092010.15	ENST00000559123.5	1033	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	713.957008509616	6528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCAGCCCAAGTCTCT	24129606	True	NA	16	True	AATAAA	-16	NA	24136162	24138959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24136342_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138561_24138735
transcript_41533.known	chr14	+	945	11	FSM	ENSG00000092010.15	ENST00000561435.5	945	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	243.141543138971	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAAGTCTCTTTATTGGA	24129670	True	NA	24	True	AATAAA	-24	NA	24136226	24138967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24136302_24136984_24137018_24137142_24137206_24137320_24137432_24137519_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138400_24138473_24138569_24138735
transcript_41534.known	chr14	-	953	5	FSM	ENSG00000100908.14	ENST00000419198.6	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_2	28.3460755661167	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140601	False	4372	-10	True	AATAAA	-15	NA	24141585	24138964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106
transcript_41535.known	chr14	-	838	6	FSM	ENSG00000100908.14	ENST00000216799.9	838	6	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_5	70.7021923281025	2533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCAGTGGTATAACTATA	-24140607	False	4372	-10	True	AATAAA	-15	NA	24141591	24138964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139197_24139359_24139455_24139544_24139615_24140888_24140966_24141106_24141317_24141437
transcript_41536.known	chr14	-	769	3	FSM	ENSG00000100908.14	ENST00000558200.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	174	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGAGGCTTGGGTTTCTGGG	-24140569	False	4372	NA	False	NA	NA	NA	24141553	24139544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24139790_24140888_24140966_24141106
transcript_41537.known	chr14	+	651	7	FSM	ENSG00000092010.15	ENST00000558112.1	651	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	906.201351184652	6398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCAGCCCAAGTCTCT	24137507	False	NA	16	True	AATAAA	-16	NA	24137519	24138959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24137566_24137699_24137798_24138048_24138118_24138195_24138264_24138344_24138404_24138473_24138561_24138735
transcript_41538.known	chr14	+	763	7	FSM	ENSG00000092010.15	ENST00000559741.5	763	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	911.439703619133	6396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATCAGCCCAAGTCTCT	24137385	False	NA	16	True	AATAAA	-16	NA	24137397	24138959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24137432_24137519_24137566_24137699_24137798_24138048_24138264_24138344_24138404_24138473_24138561_24138735
transcript_41554.known	chr14	-	755	10	FSM	ENSG00000100911.16	ENST00000560410.5	755	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_9	507.059277709334	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142233	True	NA	-21	True	AATAAA	-21	NA	24146605	24143364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146533
transcript_41557.known	chr14	+	1626	9	FSM	ENSG00000213928.9	ENST00000396864.8	1626	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	15.9921855917195	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTATCTGATTTTCTGGG	24160769	True	NA	10	True	AATAAA	-19	NA	24161264	24166565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164135_24164613_24164956_24165846_24165963_24166121
transcript_41561.known	chr14	+	1769	8	FSM	ENSG00000213928.9	ENST00000561415.1	1769	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	17.0533376947333	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCATTCTTCACACGATT	24160794	True	NA	NA	False	NA	NA	NA	24161289	24166254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24161339_24162143_24162325_24162965_24163150_24163377_24163509_24163877_24163960_24164062_24164956_24165846_24165963_24166121
transcript_41563.known	chr14	-	793	11	FSM	ENSG00000100911.16	ENST00000216802.10	793	11	0	0	0	0	multi-exon	FALSE	canonical	3	1223	junction_6	162.041229321429	10150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTTCTGGCGTGTGTCA	-24142238	True	NA	-21	True	AATAAA	-21	NA	24146610	24143364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_41564.known	chr14	-	1502	11	FSM	ENSG00000100911.16	ENST00000558273.5	1502	11	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_9	502.1080063094	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGGACTAGAAGGAAAATAAA	-24146251	True	NA	-61	True	AAGAAA	-22	NA	24147235	24143404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145897_24146207_24146241_24146533
transcript_41565.known	chr14	-	706	10	FSM	ENSG00000100911.16	ENST00000471700.6	706	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	525.666514009231	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCCTTCTGGCGTGTGTC	-24145595	False	NA	-22	True	AATAAA	-20	NA	24146579	24143365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24144191_24144260_24144399_24144469_24145057_24145156_24145242_24145274_24145378_24145466_24145709_24145773_24146207_24146241_24146533
transcript_41566.known	chr14	-	1721	8	FSM	ENSG00000100911.16	ENST00000559453.5	1721	8	0	0	0	0	multi-exon	FALSE	canonical	3	1223	junction_5	177.122003380813	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATATGTTGTGTGGATTC	-24145254	False	NA	-38	True	AATAAA	-4	NA	24146238	24143381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24143490_24143584_24143672_24143974_24144030_24144191_24144260_24144399_24145156_24145242_24145274_24145378_24145466_24145709
transcript_41567.known	chr14	-	3498	30	FSM	ENSG00000196497.17	ENST00000354464.11	3498	30	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_25	36.9999839316095	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTGAGAGCAAGAAGGCT	-24180324	True	NA	-14	True	AATAAA	-28	NA	24188816	24180218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182404_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_41568.known	chr14	-	3485	30	FSM	ENSG00000196497.17	ENST00000560155.5	3485	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	78.6373847972621	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCTGTCCCTGAGGCTGG	-24180377	True	NA	-100	True	NA	NA	NA	24188869	24180304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24180573_24180688_24180759_24181512_24181618_24181710_24181844_24181954_24182164_24182277_24182424_24182791_24182843_24182975_24183170_24183249_24183356_24183455_24183514_24183589_24183668_24183782_24183899_24183997_24184110_24184297_24184419_24184649_24184764_24184866_24184981_24185182_24185313_24185458_24185568_24185860_24185971_24186128_24186183_24186286_24186452_24186707_24186792_24186877_24186980_24187084_24187151_24187399_24187580_24187666_24187797_24188215_24188258_24188343_24188424_24188551_24188639_24188718
transcript_41570.known	chr14	+	2405	20	FSM	ENSG00000100918.14	ENST00000620473.4	2405	20	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	25.2619517255922	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTCATGACTCATTTGT	NA	False	NA	14	True	AAAACA	-20	NA	24171852	24180257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24172366_24172466_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_4158.known	chr1	+	4161	10	FSM	ENSG00000197056.11	ENST00000359858.9	4161	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	21.5807413000974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGATCTTTCCTAATC	35074307	True	NA	9	True	ATTAAA	-21	NA	35079384	35115859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_41587.known	chr14	-	2200	6	FSM	ENSG00000100926.15	ENST00000261789.9	2200	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_2	29.5499576987853	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCATGCAGTTGGAGGTT	-24193012	False	NA	-9	True	AATAAA	-16	NA	24195441	24189148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24189809_24190379_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_41596.known	chr14	-	847	6	FSM	ENSG00000254505.11	ENST00000542700.6	847	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	328.016706891585	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCCAGCCCTGGCTCAA	-24213056	False	5767	NA	False	AAAAAG	-10	NA	24213085	24209733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211410_24211593_24211679_24211830_24213023
transcript_41603.known	chr14	-	723	6	FSM	ENSG00000213920.9	ENST00000288087.12	723	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	6.8818602136341	1752	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213600	True	NA	-9	True	ATTAAA	-31	NA	24216066	24213942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24215736_24215798_24215918
transcript_4161.known	chr1	+	3980	9	FSM	ENSG00000197056.11	ENST00000373329.5	3980	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	34.9890607904814	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAATGTTTTGATCTTTCC	35074313	True	NA	4	True	ATTAAA	-16	NA	35079390	35115854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556_35104770_35110293_35110448_35111771_35111913_35112086_35112131_35112976
transcript_41613.known	chr14	-	2055	5	FSM	ENSG00000100926.15	ENST00000396854.8	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	30.4333287696236	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACAAGATCCCTGCCCTC	-24193189	True	NA	-16	True	AATAAA	-12	NA	24195618	24190041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24190654_24192170_24192357_24192647_24193270_24194674_24195037_24195345
transcript_41630.known	chr14	-	582	5	FSM	ENSG00000213920.9	ENST00000396833.2	582	5	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	59.1370230904465	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213599	True	NA	-9	True	ATTAAA	-31	NA	24216065	24213942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214545_24214600_24215551_24215663_24215736_24215798_24215918
transcript_41637.known	chr14	-	651	5	FSM	ENSG00000129559.13	ENST00000531430.5	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	2074.19845964652	2107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGAATCTTTCTTCTG	-24204037	True	NA	-26	True	AATAAA	-13	NA	24232325	24216865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24231651_24231738_24232249
transcript_41650.known	chr14	-	578	4	FSM	ENSG00000213920.9	ENST00000533536.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	71.1867653117878	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAGGCCTAAACTGAA	-24213531	True	NA	-104	True	NA	NA	NA	24215997	24214037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214491_24214600_24215551_24215798_24215887
transcript_4166.nic	chr1	+	1012	6	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-44	11061	-41	-6979	5prime_fragment	FALSE	canonical	3	66	junction_1	24.0299812734009	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGGCCTATGAATGGT	NA	False	NA	NA	False	AATAAA	-19	NA	35079340	35104798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294_35104470_35104556
transcript_41666.known	chr14	-	904	3	FSM	ENSG00000100926.15	ENST00000528010.1	904	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	117.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCAGTGGAGCGTCGGAG	-24193158	True	NA	-92	True	NA	NA	NA	24195587	24192984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24193270_24194674_24195052_24195345
transcript_41667.known	chr14	-	882	3	FSM	ENSG00000100926.15	ENST00000525592.1	882	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	115.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTGCTTGTGTTTTTACTG	-24193258	False	NA	5	True	NA	NA	NA	24195687	24192887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24193270_24194674_24195037_24195549
transcript_41679.known	chr14	-	2300	3	FSM	ENSG00000129559.13	ENST00000533242.1	2300	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	15.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATAATGTTATCTCATTCA	-24204067	True	NA	NA	False	ATTAAA	-18	NA	24232355	24226604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24228713_24231651_24231738_24232249
transcript_41683.known	chr14	-	286	2	FSM	ENSG00000129559.13	ENST00000526430.1	286	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTCTACTGGTGGG	-24204043	True	NA	NA	False	NA	NA	NA	24232331	24217019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24232249
transcript_41685.known	chr14	+	2276	19	FSM	ENSG00000100918.14	ENST00000611366.5	2276	19	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_12	22.8549505672644	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGATGTCATGACTCATT	24169462	True	NA	11	True	AAAACA	-17	NA	24172079	24180254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24172609_24172712_24172782_24172898_24173042_24173125_24173199_24173290_24173412_24175542_24175625_24176821_24176902_24177140_24177223_24177352_24177384_24177464_24177542_24177708_24177759_24178090_24178223_24178605_24178673_24178776_24178917_24179084_24179134_24179396_24179464_24179594_24179727_24179799_24179907_24180009
transcript_41686.known	chr14	-	616	4	FSM	ENSG00000129559.13	ENST00000250495.10	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	3882	junction_3	160.188083895845	52250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204079	True	NA	-17	True	AATAAA	-22	NA	24232367	24216856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24218132_24218216_24218383_24218432_24232249
transcript_41687.known	chr14	-	2108	10	FSM	ENSG00000260669.2	ENST00000565988.1	2108	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_9	262.805800713928	392	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGTTCCCAATAAAACTG	-24213508	True	NA	-65	True	NA	NA	NA	24215974	24209645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24209936_24210347_24210484_24210653_24210769_24211414_24211593_24211679_24211830_24213408_24214152_24214309_24214396_24214491_24214600_24215551_24215798_24215918
transcript_41688.known	chr14	-	889	4	FSM	ENSG00000213920.9	ENST00000530222.5	889	4	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_1	3.39934634239519	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACAGTGTGGGGAGTTTC	-24213571	True	NA	-9	True	ATTAAA	-31	NA	24216037	24213942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551
transcript_41689.known	chr14	-	527	4	FSM	ENSG00000213920.9	ENST00000525696.5	527	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	60.8166643829359	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGATTTTACCCACAGTG	-24215609	False	NA	-20	True	ATTAAA	-20	NA	24215638	24213953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214261_24214396_24214491_24214600_24215551
transcript_41690.known	chr14	-	758	8	FSM	ENSG00000255526.6	ENST00000605847.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1971.91007577394	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAGATTTTACCCACAGT	-24204048	True	NA	-21	True	ATTAAA	-19	NA	24232336	24213954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24214152_24214309_24214396_24214491_24214600_24215551_24215663_24217185_24217224_24218132_24218216_24218383_24218432_24232249
transcript_41691.known	chr14	-	626	4	FSM	ENSG00000129559.13	ENST00000396828.8	626	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	1845.066274028	1845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTCTTCTGTTGCACAAG	-24204015	True	NA	-17	True	AATAAA	-22	NA	24232303	24216856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24217224_24218058_24218216_24218383_24218432_24232249
transcript_41703.known	chr14	+	1562	10	FSM	ENSG00000100938.19	ENST00000559910.5	1562	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	107.895010697128	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAATACCTCAATAAAGAGA	24232229	False	NA	-25	True	AAAAAG	-22	NA	24232635	24239204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236042_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41705.known	chr14	+	1893	10	FSM	ENSG00000100938.19	ENST00000559836.5	1893	10	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	76.5738568674424	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232416	False	NA	13	True	AATAAA	-23	NA	24232441	24239242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232789_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41708.known	chr14	+	1748	10	FSM	ENSG00000100938.19	ENST00000559287.5	1748	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.482097556008	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATACCTCAATAAAGAGAGAG	24232228	False	NA	-22	True	AAAAAG	-25	NA	24232634	24239207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232848_24233218_24233341_24233478_24233594_24235736_24235821_24235966_24236141_24237041_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41709.known	chr14	+	1972	10	FSM	ENSG00000100938.19	ENST00000355299.8	1972	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	81.6874501142791	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232409	False	NA	13	True	AATAAA	-23	NA	24232421	24239242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232848_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41712.known	chr14	+	1595	10	FSM	ENSG00000100938.19	ENST00000399440.7	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	66.159925955741	1135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230746	True	NA	13	True	AATAAA	-23	NA	24232928	24239242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41727.nic	chr14	+	1498	9	NIC	ENSG00000100938.19	novel	1595	10	NA	NA	-27	0	intron_retention	FALSE	canonical	3	24	junction_8	108.438634720288	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24232822	False	NA	13	True	AATAAA	-23	NA	24232865	24239242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24232978_24233218_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238588
transcript_41729.known	chr14	+	1484	9	FSM	ENSG00000100938.19	ENST00000456667.7	1484	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	113.471362025843	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAAAGAGATGCTGGGG	24230765	True	NA	5	True	AATAAA	-15	NA	24232947	24239234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24232978_24233218_24233341_24233478_24233599_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_4173.nic	chr1	+	704	5	ISM	ENSG00000197056.11	ENST00000359858.9	4161	10	-44	11456	-41	6809	5prime_fragment	FALSE	canonical	3	66	junction_1	26.8642420328585	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTTGTTACCATATGTAC	NA	False	NA	NA	False	AAAAAG	-5	NA	35079340	35104403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35079443_35093913_35094084_35095818_35095892_35097316_35097567_35104294
transcript_41752.known	chr14	+	1864	9	FSM	ENSG00000100938.19	ENST00000420554.6	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_2	24.2950612265127	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24230718	True	NA	13	True	AATAAA	-23	NA	24232900	24239242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24233341_24233478_24233599_24235736_24235821_24235966_24236141_24237070_24237153_24237244_24237352_24237519_24237563_24238245_24238406_24238588
transcript_41753.known	chr14	+	657	3	FSM	ENSG00000100938.19	ENST00000558748.1	657	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	138.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATGCTGGGGCTTTCTGT	24238229	False	NA	13	True	AATAAA	-23	NA	24238245	24239242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24238406_24238588_24238749_24238905
transcript_41754.known	chr14	-	1674	8	FSM	ENSG00000092330.18	ENST00000646753.1	1674	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	74.5922247958861	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCCTTGATGTGA	-24240688	True	NA	-11	True	ATTAAA	-14	NA	24242605	24239646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24242140
transcript_41755.known	chr14	-	894	6	FSM	ENSG00000092330.18	ENST00000558476.5	894	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	80.3875612268465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGCTCACCAACCCAGGTC	-24240668	True	NA	NA	False	NA	NA	NA	24242585	24240602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242376
transcript_4176.nic	chr1	+	841	5	ISM	ENSG00000197056.11	ENST00000373329.5	3980	9	-49	11056	-40	-6979	5prime_fragment	FALSE	canonical	3	17	junction_1	43.9623418393516	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAACTGGCCTATGAATGGT	NA	False	NA	NA	False	AATAAA	-19	NA	35079341	35104798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35079443_35095818_35095892_35097316_35097567_35104294_35104470_35104556
transcript_41760.known	chr14	-	885	2	FSM	ENSG00000092330.18	ENST00000559019.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGGGGGAAGGGCT	-24240715	True	NA	NA	False	NA	NA	NA	24242632	24240482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24242140
transcript_41761.known	chr14	-	1801	9	FSM	ENSG00000092330.18	ENST00000267415.12	1801	9	0	0	0	0	multi-exon	TRUE	canonical	3	70	junction_1	65.1843539509291	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240706	True	NA	-7	True	ATTAAA	-18	NA	24242623	24239642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_41762.known	chr14	-	2168	6	FSM	ENSG00000092330.18	ENST00000399423.8	2168	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	13.42236938845	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240746	True	NA	-7	True	ATTAAA	-18	NA	24242663	24239642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240876_24241019_24241117_24241203_24241312_24241674_24241777_24241889_24241995_24242140
transcript_41763.known	chr14	-	637	3	FSM	ENSG00000092330.18	ENST00000560019.5	637	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	3	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTTGATGTGAAGGA	-24240453	False	NA	-7	True	ATTAAA	-18	NA	24240474	24239642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24240156_24240262_24240331_24240418
transcript_41764.known	chr14	-	1643	7	FSM	ENSG00000092330.18	ENST00000626689.2	1643	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	80.042523420714	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATACTGCCTTGATGTGA	-24242653	False	NA	-11	True	ATTAAA	-14	NA	24242674	24239646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24239932_24240063_24240156_24240262_24240331_24240418_24240876_24241674_24241777_24241889_24241995_24242140
transcript_41768.known	chr14	-	1883	17	FSM	ENSG00000100949.15	ENST00000558376.5	1883	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.4113660249079	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCTCTCAGGCTACCAAG	-24270147	True	NA	-21	True	AATAAA	-10	NA	24271549	24265556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271170_24271486
transcript_41769.known	chr14	-	1963	17	FSM	ENSG00000100949.15	ENST00000559974.5	1963	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	42.1225889517727	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCTCAGGCTACCAAGC	-24270147	True	NA	-20	True	AATAAA	-11	NA	24271549	24265555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24265764_24266429_24266518_24266775_24266890_24267659_24267777_24267865_24267959_24268109_24268199_24268368_24268421_24268513_24268620_24268724_24268827_24268910_24268994_24269079_24269164_24269490_24269695_24269952_24270141_24270333_24270459_24270836_24270948_24271112_24271249_24271486
transcript_4178.known	chr1	+	508	4	FSM	ENSG00000197056.11	ENST00000466390.5	508	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	53.5225809043871	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCCCTACCTTGTTCTT	35074304	True	NA	NA	False	NA	NA	NA	35079381	35097594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35079443_35093913_35094010_35095818_35095892_35097316
transcript_41790.nnic	chr14	+	601	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	0	-73	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	4.02768199119819	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACCTTACCTGAAGTTA	24270482	True	NA	18	True	CATAAA	-19	NA	24271200	24298785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_41791.nnic	chr14	+	667	4	NNC	ENSG00000288044.2	novel	355	2	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	4.02768199119819	96	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAGTATTATAGTTTC	24270482	True	NA	84	True	AATAAA	-14	NA	24271200	24298851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24271311_24292197_24292353_24292436_24292601_24298613
transcript_41802.nnic	chr14	+	512	3	NNC	ENSG00000288044.2	novel	355	2	NA	NA	0	-7	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	11.5	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAGTATTATAGTTTC	24270482	True	NA	84	True	AATAAA	-14	NA	24271200	24298851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24271311_24292436_24292601_24298613
transcript_41803.known	chr14	+	331	2	FSM	ENSG00000288044.2	ENST00000669726.2	355	2	12	12	12	-12	multi-exon	FALSE	canonical	3	87	junction_1	0	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTGAGTAGTATTATA	24270494	True	NA	79	True	AATAAA	-9	NA	24271212	24298846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24271311_24298613
transcript_41805.known	chr14	-	1427	9	FSM	ENSG00000157379.14	ENST00000288111.12	1427	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	9.10957600550102	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTTTGACTGCTGATT	-24299097	True	NA	-4	True	AATAAA	-20	NA	24299780	24290597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24290996_24291138_24291220_24291555_24291626_24292183_24292331_24292651_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_41806.known	chr14	-	2027	7	FSM	ENSG00000157379.14	ENST00000561273.5	2027	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	7.11219609778396	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTCTTGGAGCTAATAAAA	-24299078	True	NA	-42	True	NA	NA	NA	24299761	24290635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24290996_24291138_24291626_24292183_24292785_24296508_24296589_24296737_24296882_24298956_24299131_24299580
transcript_41809.known	chr14	+	6045	10	FSM	ENSG00000196943.14	ENST00000267425.8	6045	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	9.06492357972051	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTGCCAGTCTTTTGTC	24296949	True	NA	4	True	AATAAA	-15	NA	24299849	24309124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24300202_24300407_24300858_24301611_24301723_24301964_24302107_24302231_24302425_24303073_24303215_24303731_24303858_24304040_24304278_24304492_24304599_24304937
transcript_41810.known	chr14	-	1872	10	FSM	ENSG00000129465.16	ENST00000216274.10	1872	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.955813918560292	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTGAGCTCAGCCAG	NA	False	NA	NA	False	AATAAA	-16	NA	24339991	24336024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24336396_24336884_24336946_24337085_24337461_24337694_24337763_24337872_24338041_24338248_24338296_24338421_24338568_24339014_24339325_24339456_24339598_24339806
transcript_41812.known	chr14	+	3057	10	FSM	ENSG00000100968.14	ENST00000554050.5	3057	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	29.7860684975915	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGGCTCCAGAGCTCTT	24368006	False	NA	28	True	AATAAA	-18	NA	24368019	24378056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376555_24377637
transcript_41813.known	chr14	+	4762	10	FSM	ENSG00000100968.14	ENST00000250373.9	4762	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_9	13.2748718344933	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATTCAAACTCAATATTTT	24367311	True	NA	3	True	AATAAA	-19	NA	24368183	24379601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293_24376879_24377637
transcript_41815.known	chr14	+	5367	9	FSM	ENSG00000100968.14	ENST00000553708.5	5367	9	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_5	11.8367806011601	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTCAATATTTTTTG	24368327	False	NA	6	True	AATAAA	-22	NA	24368340	24379604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24368441_24369498_24370595_24372440_24372604_24373170_24373371_24373694_24373868_24374325_24374467_24375659_24375716_24375974_24376102_24376293
transcript_41817.nnic	chr14	+	605	3	NNC	ENSG00000205978.6	novel	7635	9	NA	NA	-135	-8937	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGCCTGACACATAATAAGC	24398850	False	NA	NA	False	AATAAA	-19	NA	24398867	24405781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24399087_24399229_24399445_24405610
transcript_41818.nnic	chr14	+	1074	3	NNC	ENSG00000205978.6	novel	7635	9	NA	NA	-135	-8468	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	18.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGACAGTTGATGGAAC	24398850	False	NA	NA	False	AATAAA	-42	NA	24398867	24406250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_24399087_24399229_24399445_24405610
transcript_41833.known	chr14	-	1206	6	FSM	ENSG00000100445.18	ENST00000399395.8	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_5	104.542814195907	3332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGGCTCATCTCTTTGGC	-24436650	True	NA	-12	True	AATAAA	-19	NA	24442776	24439765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442753
transcript_41844.known	chr14	-	976	5	FSM	ENSG00000100445.18	ENST00000555365.5	976	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	176.143939719764	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACATTAATCTTTTCAACTC	-24436639	True	NA	NA	False	NA	NA	NA	24442765	24439901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442345_24442453_24442753
transcript_41857.known	chr14	-	1041	4	FSM	ENSG00000100445.18	ENST00000538105.6	1041	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	155.857484759493	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGTCTCACTAACCTT	-24442411	False	107	-28	True	AATAAA	-3	NA	24442448	24439781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24442177_24442261_24442345
transcript_41858.known	chr14	-	1960	3	FSM	ENSG00000100445.18	ENST00000556262.5	1960	3	0	0	0	0	multi-exon	FALSE	canonical	3	394	junction_2	26.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTGTCTCACTAACCTTGG	-24436650	True	NA	-26	True	AATAAA	-5	NA	24442776	24439779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441673
transcript_41859.known	chr14	-	1203	4	FSM	ENSG00000100445.18	ENST00000554947.5	1203	4	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_3	62.5513122697411	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACCAGTATTCCTTCCCAG	-24436633	True	NA	NA	False	NA	NA	NA	24442759	24440137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24441673_24441796_24442177
transcript_41860.known	chr14	-	1325	6	FSM	ENSG00000100445.18	ENST00000553930.5	1325	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	171.375144055373	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTCTCACTAACCTTGGC	-24442821	False	NA	-25	True	AATAAA	-6	NA	24442858	24439778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440602_24440782_24440927_24441673_24441796_24442177_24442261_24442345_24442453_24442812
transcript_41861.known	chr14	-	1196	3	FSM	ENSG00000100445.18	ENST00000556707.5	1196	3	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_2	206.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTAGGCAATAAAAATAAAT	-24442416	False	107	-43	True	NA	NA	NA	24442453	24439796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24440493_24440782_24440927_24442097
transcript_41867.nnic	chr14	+	1996	2	FSM	ENSG00000258744.3	ENST00000690491.1	1230	2	-96	-670	-96	670	multi-exon	FALSE	canonical	3	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTTTTAATTGATTTTT	NA	False	NA	20	True	AATAAA	-20	NA	24442913	24446051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_24443142_24444283
transcript_41868.nnic	chr14	+	1920	2	NIC	ENSG00000258744.3	novel	1230	2	NA	NA	-46	673	combination_of_known_splicesites	FALSE	canonical	3	15	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTAATTGATTTTTCCA	24442597	True	NA	23	True	AATAAA	-23	NA	24442963	24446054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_24443113_24444283
transcript_41873.known	chr14	-	4132	6	FSM	ENSG00000168952.16	ENST00000323944.10	4190	6	-150	208	-150	-6	multi-exon	FALSE	canonical	3	34	junction_5	10.8185026690388	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGAAATTTGTTTCTTGC	NA	False	NA	-8	True	ATTAAA	-14	NA	25050297	24809661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049877
transcript_41874.known	chr14	-	1970	6	FSM	ENSG00000168952.16	ENST00000419632.6	1970	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.7873916182502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAGAATCGCAGATAGAAAT	-25049327	False	NA	NA	False	NA	NA	NA	25049889	24812086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_24812733_24819036_24819195_24855935_24856102_24857026_24857158_24974664_24974851_25049206
transcript_41875.nic	chr14	-	1464	6	NIC	ENSG00000139910.20	novel	896	5	NA	NA	-96	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	18.6161220451522	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	-26597168	False	NA	-12	True	AATAAA	-16	NA	26597178	26470117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_26470491_26472319_26472392_26479976_26480144_26549679_26549782_26595409_26595554_26596572
transcript_41879.known	chr14	-	896	5	FSM	ENSG00000139910.20	ENST00000344429.9	896	5	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	11.2333209693305	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAAAGAGTAAGTTTGATC	-26597430	False	93	-12	True	AATAAA	-16	NA	26597440	26470117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_26470491_26472319_26472392_26479976_26480144_26595409_26595554_26597300
transcript_41916.nnic	chr14	+	484	3	NNC	ENSG00000257842.6	novel	1800	3	NA	NA	41609	41	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTATGGTATTTTGT	26678761	True	NA	NA	False	AATAAA	-19	NA	26678849	26701659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_26679115_26679259_26679399_26701579
transcript_41919.nnic	chr14	+	323	3	NNC	ENSG00000257842.6	novel	1800	3	NA	NA	41612	41	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTATGGTATTTTGT	26678764	True	NA	NA	False	AATAAA	-19	NA	26678852	26701659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_26679030_26695064_26695131_26701579
transcript_41928.known	chr14	-	578	3	FSM	ENSG00000258932.5	ENST00000556890.1	578	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTTTAAATATAATCATGG	-27672522	True	NA	NA	False	NA	NA	NA	27673221	27321921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_27322142_27656337_27656503_27673028
transcript_41929.known	chr14	+	1585	1	FSM	ENSG00000197358.9	ENST00000550043.1	1585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	605	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAATAAATAAATAAAAAAA	NA	False	NA	NA	False	AATAAA	-19	NA	28264389	28265974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_28264400_28266000
transcript_41931.nnic	chr14	+	512	4	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-130	-11665	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	0.816496580927726	83	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	28318010	28406947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_28318246_28318414_28318533_28405425_28405473_28406835
transcript_41933.nnic	chr14	+	436	4	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-116	-11665	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	4.49691252107735	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	28317781	True	NA	NA	False	ATTAAA	-16	NA	28318024	28406947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_28318184_28318414_28318533_28405425_28405473_28406835
transcript_41936.nnic	chr14	+	849	3	NNC	ENSG00000257869.1	novel	508	3	NA	NA	-298	-11665	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	0.5	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTAATTTCTCTCA	NA	False	NA	NA	False	ATTAAA	-16	NA	28317842	28406947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_28318533_28405425_28405473_28406835
transcript_41946.known	chr14	+	5770	15	FSM	ENSG00000092140.16	ENST00000206595.11	5770	15	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_7	41.3792810227435	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGGACTCAGATAAATGGC	30550113	True	NA	-94	True	AATAAA	-17	NA	30559157	30620064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_41966.known	chr14	+	2334	14	FSM	ENSG00000092140.16	ENST00000438909.6	2334	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	104.708781838406	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGAATATTATAGCCACT	30550113	True	NA	7	True	AATAAA	-18	NA	30559157	30616669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30559273_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504_30605813_30607887_30608070_30612206_30612380_30615348_30615540_30616277
transcript_41974.nic	chr14	+	1218	11	ISM	ENSG00000092140.16	ENST00000206595.11	5770	15	-28	14499	-28	0	5prime_fragment	FALSE	canonical	3	318	junction_7	43.42303536143	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAACTAAAAGATT	30550085	True	NA	NA	False	AATAGA	-17	NA	30559129	30605565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473_30593640_30597419_30597527_30598482_30598600_30601769_30601895_30601998_30602132_30605504
transcript_41981.nic	chr14	+	2024	6	ISM	ENSG00000092140.16	ENST00000648008.1	4126	16	-92	23237	-28	1349	5prime_fragment	TRUE	canonical	3	398	junction_4	20.4606940253746	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGTGC	30550085	True	NA	NA	False	AATACA	-14	NA	30559129	30594988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_30559273_30581075_30581117_30586717_30586816_30589382_30589485_30592322_30592448_30593473
transcript_41990.known	chr14	+	2171	25	FSM	ENSG00000092108.22	ENST00000677340.1	2171	25	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	147.39513692415	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612526	True	NA	NA	False	NA	NA	NA	30622321	30735774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622463_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700190_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41991.known	chr14	+	2058	24	FSM	ENSG00000092108.22	ENST00000544052.6	2058	24	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	101.629093225277	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAATAAAATTTCAACATT	30612523	True	NA	NA	False	ATTAAA	-12	NA	30622318	30735789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41995.known	chr14	+	1970	23	FSM	ENSG00000092108.22	ENST00000676834.1	1970	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_15	143.488797904111	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612516	True	NA	NA	False	NA	NA	NA	30622311	30735774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41998.known	chr14	+	3270	22	FSM	ENSG00000092108.22	ENST00000677690.1	3270	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.253089584558	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	30612500	True	NA	NA	False	TATAAA	-38	NA	30622295	30737192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30630476_30630566_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_41999.known	chr14	+	3296	22	FSM	ENSG00000092108.22	ENST00000678716.1	3296	22	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	120.76828885033	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCCAGCACTTTGGGAGGC	30612508	True	NA	NA	False	TATAAA	-38	NA	30622303	30737192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_42.known	ERCC-00095	+	513	1	FSM	ERCC-00095A	DQ516759	513	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1228	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00095_+_0_500
transcript_42004.nnic	chr14	+	1115	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2847	0	at_least_one_novel_splicesite	FALSE	canonical	3	58	junction_1	148.30764317726	508	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	30690339	30735799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_30690578_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_42005.nnic	chr14	+	1056	12	NNC	ENSG00000092108.22	novel	2358	10	NA	NA	-2873	0	at_least_one_novel_splicesite	FALSE	canonical	1	9	junction_1	162.024944513578	180	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACATTGTTCATTTTC	NA	False	NA	NA	False	AATAAA	-2	NA	30690313	30735799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_30690493_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_4201.known	chr1	-	693	4	FSM	ENSG00000116560.11	ENST00000485365.1	693	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	190.482428469283	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35181364	False	NA	-8	True	AATAAA	-17	NA	35181606	35176379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35181134
transcript_42017.known	chr14	+	2190	25	FSM	ENSG00000092108.22	ENST00000458591.7	2190	25	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	56.2723875201881	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAGGTTATGATTGAAG	30612523	True	NA	NA	False	GATAAA	-23	NA	30622318	30735850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_42018.known	chr14	+	1943	24	FSM	ENSG00000092108.22	ENST00000463622.6	1943	24	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	116.915396034345	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAACAGTGTCCTA	30612523	True	NA	81	True	GATAAA	-39	NA	30622318	30735692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_42019.known	chr14	+	2049	24	FSM	ENSG00000092108.22	ENST00000679102.1	2049	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_16	115.417922292811	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30735774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30675066_30694772_30694870_30700187_30700259_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_4202.known	chr1	-	434	4	FSM	ENSG00000116560.11	ENST00000490668.5	434	4	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_3	173.076733143296	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGGTTTTGTTTTTGT	-35181323	False	NA	-8	True	AATAAA	-17	NA	35181344	35176379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176475_35177318_35177400_35177988_35178037_35181134
transcript_42020.known	chr14	+	1729	21	FSM	ENSG00000092108.22	ENST00000557076.6	1729	21	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_10	122.558914404461	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612521	True	NA	NA	False	NA	NA	NA	30622316	30735774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_42021.known	chr14	+	1470	4	FSM	ENSG00000092108.22	ENST00000677445.1	1470	4	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_1	47.377913278939	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCAAGTATGCTATTCA	30612524	True	NA	NA	False	NA	NA	NA	30622319	30635176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946
transcript_42022.known	chr14	+	3919	25	FSM	ENSG00000092108.22	ENST00000679096.1	3919	25	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	116.13024745948	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAGAAACATTTCAGAAA	30612508	True	NA	NA	False	NA	NA	NA	30622303	30735774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30622400_30628208_30628280_30630476_30630566_30633946_30634038_30638124_30638248_30639776_30639865_30643315_30643406_30649527_30649584_30650564_30650651_30653488_30653589_30670255_30670396_30673256_30673348_30673923_30673998_30674983_30676856_30694772_30694870_30700187_30700259_30702295_30702376_30705822_30705886_30707989_30708066_30715923_30715978_30719324_30719378_30721883_30721918_30722493_30722560_30734789_30734859_30735585
transcript_42023.known	chr14	+	425	1	FSM	ENSG00000213867.4	ENST00000468034.1	425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTTTTGGTCATTA	NA	False	NA	NA	False	NA	NA	NA	30821418	30821843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30821400_30821800
transcript_42028.known	chr14	+	2536	12	FSM	ENSG00000100473.18	ENST00000396618.9	2536	12	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	19.197968212055	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874592_30874915_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_4203.known	chr1	-	874	9	FSM	ENSG00000116560.11	ENST00000470472.5	874	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	938.692008861266	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35190561	False	166	-6	True	AATAAA	-19	NA	35190574	35176377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176475_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497
transcript_42032.known	chr14	+	2860	11	FSM	ENSG00000100473.18	ENST00000644874.2	2860	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_7	14.624978632463	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCTTACTTTTATTACT	30873522	True	NA	4	True	AATAAA	-22	NA	30874558	30890618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_42033.known	chr14	+	2582	11	FSM	ENSG00000100473.18	ENST00000216361.9	2582	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	25.6085923080516	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCATAGCTCAATAAAAGAA	30873477	True	NA	-28	True	ACTAAA	-18	NA	30874513	30890100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875299_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_42036.known	chr14	+	2688	10	FSM	ENSG00000100473.18	ENST00000460581.6	2688	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27.1925007817492	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTGGCTTACTTTTATTA	30874721	True	NA	2	True	AATAAA	-20	NA	30874763	30890616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30875056_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615
transcript_42038.known	chr14	+	1819	12	FSM	ENSG00000100473.18	ENST00000643575.1	1819	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.172462981639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTAAGGCAGCACACAGA	30874849	False	NA	NA	False	NA	NA	NA	30874891	30895029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_30874973_30875055_30875104_30877571_30877729_30878810_30878945_30879422_30879486_30880451_30880497_30880586_30880735_30884552_30884657_30885393_30885621_30885795_30886313_30889615_30889794_30894912
transcript_4204.known	chr1	-	464	6	FSM	ENSG00000116560.11	ENST00000460428.5	464	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	1039.60811847542	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGGTTTTGTTTTTGTTT	-35188029	False	260	-6	True	AATAAA	-19	NA	35188042	35176377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35176472_35177318_35177400_35177988_35178037_35187000_35187123_35187202_35187252_35187972
transcript_42044.known	chr14	+	4060	6	FSM	ENSG00000100478.16	ENST00000542754.7	4060	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	7.38647412504775	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGTAGTGTGA	31025335	True	NA	9	True	AATAAA	-24	NA	31025648	31096450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080585_31092906
transcript_42045.known	chr14	+	1608	6	FSM	ENSG00000100478.16	ENST00000554345.6	1608	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	14.0342438342791	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCTGTTTGTATTTTATAA	31025337	True	NA	NA	False	AATAAA	-22	NA	31025650	31085802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31025788_31066125_31066335_31069842_31069930_31072904_31072974_31080572_31080645_31084768
transcript_42046.known	chr14	-	9080	43	FSM	ENSG00000092148.14	ENST00000553700.5	9080	43	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_42	53.2806978786869	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAACTGTGTCATGTGAC	-31203572	True	NA	-4	True	ATTAAA	-14	NA	31207804	31100117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31101068_31101179_31101325_31102915_31103067_31105382_31105477_31105589_31105669_31106645_31107254_31107566_31107705_31109396_31109599_31112415_31112544_31113103_31113190_31113276_31113485_31113876_31114060_31114285_31114341_31116235_31116459_31119709_31119867_31121382_31121506_31122913_31123048_31127784_31128007_31128611_31129449_31133237_31133415_31133508_31133676_31134871_31135196_31135475_31135616_31136530_31136666_31139891_31139998_31141857_31141953_31144110_31144258_31144806_31144942_31148720_31148798_31148896_31149161_31149998_31150222_31156839_31157011_31157164_31157304_31168297_31168473_31169353_31169469_31171860_31171960_31172045_31172123_31173155_31173427_31173524_31173807_31174910_31175139_31178019_31178255_31205796_31205958_31207390
transcript_42048.nic	chr14	-	789	3	ISM	ENSG00000092148.14	ENST00000554471.3	3093	8	44	8750	10	159	5prime_fragment	FALSE	canonical	3	65	junction_2	19.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCTAAAAAAAAAAATTCT	-31203437	True	NA	NA	False	ACTAAA	-10	NA	31207669	31177905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31178255_31205796_31205958_31207390
transcript_4205.known	chr1	-	3740	10	FSM	ENSG00000116560.11	ENST00000357214.6	3740	10	0	0	0	0	multi-exon	FALSE	canonical	3	1936	junction_9	195.766868153594	1332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGTGTTGTCAGTTAA	-35104552	True	NA	-14	True	CATAAA	-14	NA	35193145	35182935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35184594_35187000_35187123_35187202_35187252_35187972_35188091_35189002_35189088_35189185_35189383_35190497_35190594_35190693_35190996_35191340_35191530_35192221
transcript_42051.nnic	chr14	-	652	4	NNC	ENSG00000129493.15	novel	507	3	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.6020832956587	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	-31420612	False	NA	NA	False	ATTAAA	-19	NA	31420622	31400265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_31400513_31402849_31403050_31410490_31410545_31420471
transcript_42054.known	chr14	-	480	3	FSM	ENSG00000129493.15	ENST00000549184.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_2	45.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCATGAAGCAATCGATAAA	-31420285	False	NA	NA	False	NA	NA	NA	31420295	31400376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31400513_31402849_31403050_31420151
transcript_42055.known	chr14	-	7811	36	FSM	ENSG00000129493.15	ENST00000543095.7	7811	36	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_35	17.9036879110514	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGTATTTTTAAATTAT	-31419272	True	NA	-2	True	AATAAA	-18	NA	31420550	31291787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31293613_31293890_31294105_31295908_31296064_31302294_31302520_31304904_31305178_31306731_31306880_31307892_31308021_31308933_31309183_31312967_31313191_31315769_31315950_31318223_31318293_31321498_31321681_31323564_31323805_31326162_31326343_31337475_31337615_31343895_31344066_31345086_31345277_31347747_31347908_31349788_31349980_31350611_31350718_31358636_31358813_31358893_31359058_31364188_31364299_31371809_31371910_31374815_31374969_31380466_31380579_31383520_31383772_31386419_31386576_31387119_31387376_31388844_31389006_31394051_31394227_31395198_31395349_31398672_31398782_31400300_31400513_31402849_31403050_31420471
transcript_42056.known	chr14	-	507	3	FSM	ENSG00000129493.15	ENST00000382464.6	507	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	64.5	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTCCTGTTGTATTT	-31419253	True	NA	NA	False	ATTAAA	-19	NA	31420531	31400265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31400513_31402849_31403050_31420471
transcript_42059.known	chr14	-	749	4	FSM	ENSG00000203546.7	ENST00000547760.1	749	4	0	0	0	0	multi-exon	FALSE	non_canonical	1	4	junction_1	19.6129209111409	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	-31455153	True	NA	-37	True	NA	NA	NA	31457376	31427506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31427793_31428143_31428189_31453274_31453345_31457028
transcript_42060.nic	chr14	-	593	4	NIC	ENSG00000203546.7	novel	749	4	NA	NA	-33	0	combination_of_known_junctions	FALSE	non_canonical	1	4	junction_1	18.6964048831735	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTATGAATCTTATTACA	-31455251	True	NA	-37	True	NA	NA	NA	31457474	31427506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_31427793_31428143_31428189_31453274_31453345_31457282
transcript_42063.known	chr14	-	2713	3	FSM	ENSG00000129480.13	ENST00000310850.9	2713	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	7	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTTGTCTCAAAGTTT	-31455283	True	NA	-5	True	AATAAA	-20	NA	31457506	31446035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31448455_31453274_31453345_31457282
transcript_42066.nic	chr14	-	886	2	ISM	ENSG00000129480.13	ENST00000549850.1	823	3	-20	4777	-2	-4777	5prime_fragment	FALSE	canonical	3	50	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGTGAGAAAGAATAGTA	-31455285	True	NA	NA	False	NA	NA	NA	31457508	31452938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31453345_31457028
transcript_42069.nic	chr14	-	547	2	ISM	ENSG00000129480.13	ENST00000549850.1	823	3	-20	5116	-2	-5116	5prime_fragment	FALSE	canonical	3	50	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTATGTGTTTGACTTTG	-31455285	True	NA	NA	False	GATAAA	-17	NA	31457508	31453277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_31453345_31457028
transcript_42070.known	chr14	-	1400	5	FSM	ENSG00000129480.13	ENST00000356180.4	1400	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	27.9419040152957	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGTCTATTTTTCAGTTT	-31455202	True	NA	NA	False	ATTAAA	-20	NA	31457425	31446991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_31447249_31447389_31447570_31447704_31448455_31453274_31453345_31457282
transcript_42071.known	chr14	+	429	3	FSM	ENSG00000250365.7	ENST00000550431.1	429	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTTTTTCAGTTCGTCT	31420922	False	NA	NA	False	ATTAAA	-30	NA	31420943	31439945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31420978_31421847_31421969_31439671
transcript_42072.known	chr14	+	3040	11	FSM	ENSG00000151413.17	ENST00000281081.12	3040	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_4	10.6249705881946	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATATCTGAACTGAAA	31560454	True	NA	22	True	AATAAA	-24	NA	31561403	31861224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31846470_31846592_31850118_31850202_31859117
transcript_42076.nnic	chr14	+	1957	9	NIC	ENSG00000151413.17	novel	3040	11	NA	NA	-11	13	combination_of_known_splicesites	FALSE	canonical	2	2	junction_8	29.0277345826367	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAAGTCGGGGG	NA	False	NA	NA	False	NA	NA	NA	31561373	31860315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628_31826715_31859117
transcript_42077.nic	chr14	+	849	8	ISM	ENSG00000151413.17	ENST00000281081.12	3040	11	-30	34420	-11	-23291	5prime_fragment	FALSE	canonical	3	66	junction_4	11.9522860933439	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCTGTACAGAAGTCTTTA	NA	False	NA	NA	False	AATACA	-18	NA	31561373	31826804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31673354_31673395_31673483_31673575_31787779_31787874_31826628
transcript_42081.nnic	chr14	+	899	5	NNC	ENSG00000151413.17	novel	578	7	NA	NA	-11	51726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	41.4329277266283	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTTCAATAAGAGATATAT	NA	False	NA	NA	False	AATAAA	-15	NA	31561373	31613923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_31561548_31562067_31562216_31565013_31565049_31599288_31599380_31613472
transcript_42083.known	chr14	+	4824	7	FSM	ENSG00000100852.14	ENST00000556611.5	4824	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	47.5815090134813	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTCAGTAGTATACTTCA	32074456	True	NA	NA	False	AAAAAG	-24	NA	32076966	32155011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_32077054_32090501_32094387_32117142_32117288_32146262_32146341_32149901_32150034_32152422_32152529_32154620
transcript_42086.known	chr14	-	1848	1	FSM	ENSG00000258655.2	ENST00000553596.2	1848	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	50	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAGTTCAAGTTATTCT	-32076773	False	NA	NA	False	AGTAAA	-14	NA	32076793	32074945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_32074900_32076800
transcript_42087.known	chr14	-	1304	1	FSM	ENSG00000286527.1	ENST00000670017.1	1304	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCTAACGCCCTGTCT	-32201726	True	NA	NA	False	AATAAA	-16	NA	32201736	32200432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_32200400_32201700
transcript_42089.known	chr14	-	2706	5	FSM	ENSG00000129521.15	ENST00000250457.9	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	5.76085931090146	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCATTCTAATGGTTTGA	-33948377	True	NA	-9	True	AATAAA	-15	NA	33951074	33924226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950395
transcript_42091.known	chr14	-	1004	5	FSM	ENSG00000129521.15	ENST00000553215.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	30.7774267930248	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGGAGAATTATCACAA	-33948129	False	NA	NA	False	NA	NA	NA	33950826	33925398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_33925923_33926959_33927034_33929075_33929213_33931095_33931216_33950677
transcript_42097.known	chr14	-	2849	1	FSM	ENSG00000129521.15	ENST00000547327.2	2849	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCATTTCTACATGATT	-33948384	True	NA	NA	False	ATTAAA	-16	NA	33951081	33948232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_33948200_33951100
transcript_42099.known	chr14	-	1303	6	FSM	ENSG00000129518.10	ENST00000250454.8	1303	6	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_2	33.9682204420544	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTATTGTTTTTGCT	-34535175	True	NA	-8	True	ATTAAA	-20	NA	34539701	34515937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34516587_34524696_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_4210.known	chr1	-	469	2	FSM	ENSG00000142687.18	ENST00000473465.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAGTCTGTTCTGTAA	-35551999	True	NA	NA	False	AATATA	-13	NA	35557388	35556470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35556758_35557206
transcript_42100.known	chr14	-	1237	10	NNC	ENSG00000129518.10	novel	1303	6	NA	NA	-7	-74	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	193.072812977672	283	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTTTGTTTCTGAGTGTT	-34535185	True	NA	-18	True	ATTAAA	-36	NA	34539711	34516011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_34516488_34516489_34516587_34524684_34524690_34524694_34524719_34524720_34524736_34524740_34524808_34529357_34529476_34533443_34533540_34536093_34536276_34539554
transcript_42101.known	chr14	-	841	4	FSM	ENSG00000129518.10	ENST00000555705.1	841	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	185.982675417781	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAACTTAAAGTTAATATT	-34535172	True	NA	NA	False	AAAAAG	-43	NA	34539698	34529355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34529476_34533443_34533540_34536093_34536276_34539255
transcript_42102.known	chr14	-	562	2	FSM	ENSG00000129518.10	ENST00000555683.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCAGTGGCATGATCATAG	-34535178	True	NA	NA	False	NA	NA	NA	34539704	34535863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34536276_34539554
transcript_42103.known	chr14	+	671	1	FSM	ENSG00000279423.1	ENST00000623080.1	671	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	70	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGTGTAAATGTTAAGAA	NA	False	NA	NA	False	AATAAA	-31	NA	34541043	34541714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34541000_34541700
transcript_42104.known	chr14	+	164	1	FSM	ENSG00000206596.1	ENST00000383869.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	65	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34546713	34546877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34546700_34546900
transcript_42105.known	chr14	-	164	1	FSM	ENSG00000206588.1	ENST00000383861.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTGGAAGTTGAAAGG	NA	False	NA	NA	False	NA	NA	NA	34556389	34556225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34556200_34556400
transcript_42107.known	chr14	-	1855	15	FSM	ENSG00000129515.20	ENST00000556162.6	1855	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	310.612462790559	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAGCATCTTAATCAGAC	-34623221	True	NA	33	True	TTTAAA	-35	NA	34630158	34562659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34604134_34604269_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629951_34630110
transcript_42109.known	chr14	-	2975	14	FSM	ENSG00000129515.20	ENST00000652385.1	2975	14	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_13	99.8392198611608	1029	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGTGAAAATGCTGTGTA	-34623223	True	NA	NA	False	AATAAA	-20	NA	34630160	34561411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34563176_34567685_34567772_34567853_34568014_34575755_34575843_34581560_34581601_34586229_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34608029_34608141_34609637_34609743_34629906_34629955_34630110
transcript_4211.known	chr1	-	4777	21	FSM	ENSG00000142687.18	ENST00000325722.8	4777	21	0	0	0	0	multi-exon	TRUE	canonical	3	185	junction_20	32.5743764330186	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCTGTCTGCTGGGTGTG	-35552014	True	NA	-7	True	ATTAAA	-18	NA	35557403	35433491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35435082_35441046_35441139_35442245_35442337_35442905_35443029_35444160_35444304_35448172_35448333_35449866_35450006_35450357_35450510_35451627_35451777_35453556_35453690_35454361_35454486_35456012_35456242_35460304_35460438_35462620_35462714_35466607_35466696_35470862_35470961_35474804_35474907_35478965_35479213_35506611_35507136_35554349_35554520_35557206
transcript_42128.known	chr14	-	441	1	FSM	ENSG00000240463.1	ENST00000480487.1	441	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	911	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACCATGCTGGGTTAA	NA	False	NA	-54	True	NA	NA	NA	34569129	34568688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34568700_34569100
transcript_42129.known	chr14	-	725	8	FSM	ENSG00000129515.20	ENST00000557265.6	725	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	283.37895591074	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGTGTTCTAATTTAAAA	-34623221	True	NA	NA	False	NA	NA	NA	34630158	34586229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34586306_34593044_34593151_34597549_34597646_34603347_34603472_34605595_34605718_34609637_34609743_34629906_34629955_34630110
transcript_4213.known	chr1	+	3433	8	FSM	ENSG00000020129.16	ENST00000356090.8	3433	8	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_2	30.5774359918672	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGCGTGGTCTGCCC	35553098	True	NA	20	True	AATAAA	-20	NA	35557791	35566779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35557884_35558155_35558224_35559106_35559248_35560325_35561295_35562391_35562634_35563201_35563427_35563766_35563910_35565226
transcript_42131.known	chr14	-	4306	4	FSM	ENSG00000165410.15	ENST00000298159.11	4306	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_2	21.6999743983464	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGATCATTGAACCTCT	-34713052	True	NA	NA	False	ATTAAA	-21	NA	34714593	34709112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714537
transcript_42132.known	chr14	-	1223	4	FSM	ENSG00000165410.15	ENST00000422678.2	1223	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	54.3220847251731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAATAAAAATTGTGGCAT	-34713036	True	NA	NA	False	NA	NA	NA	34714577	34712036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713396_34713562_34714537
transcript_42133.known	chr14	-	632	4	FSM	ENSG00000165410.15	ENST00000555765.5	632	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	47.3380279362046	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCATCTGGATCTTAAGGA	-34713014	True	NA	NA	False	TATAAA	-13	NA	34714555	34712851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713253_34713562_34714434
transcript_42137.known	chr14	-	1387	4	FSM	ENSG00000165410.15	ENST00000554470.5	1387	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	55.7155474012615	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCCTTGTTTTCCTTGG	-34714795	False	NA	NA	False	AATAAA	-21	NA	34714823	34712007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34712978_34713059_34713137_34713507_34713562_34714537
transcript_42141.known	chr14	-	5920	26	FSM	ENSG00000198604.11	ENST00000358716.8	5920	26	0	0	0	0	multi-exon	TRUE	canonical	1	24	junction_15	22.784205055257	256	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGAATTCTCTAATTTTT	NA	False	NA	NA	False	AATAAA	-20	NA	34875647	34752730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34753705_34754826_34754915_34758703_34758847_34761756_34762224_34764706_34764934_34765020_34765269_34771510_34771660_34773571_34773727_34774326_34774491_34775918_34776516_34780185_34780311_34783118_34783233_34783761_34783928_34785776_34786002_34792774_34792922_34794748_34794888_34795669_34795766_34800223_34800391_34801093_34801194_34802853_34802989_34807450_34807539_34810934_34811037_34826012_34826157_34862043_34862323_34874491_34874663_34875137
transcript_4215.known	chr1	+	2245	7	FSM	ENSG00000116819.9	ENST00000373235.4	2245	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCAGTGCAACTTATTTA	35573204	True	NA	5	True	ATTAAA	-16	NA	35573313	35595328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35573605_35573926_35574410_35574948_35575001_35588329_35588553_35589929_35590049_35590633_35590776_35594393
transcript_42150.known	chr14	+	2253	16	FSM	ENSG00000100883.13	ENST00000678963.1	2253	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	179.561861825451	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982328	True	NA	25	True	AATAAA	-10	NA	34982700	35029554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983004_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_4216.known	chr1	-	852	3	FSM	ENSG00000239636.2	ENST00000444348.2	902	3	42	8	42	-2	multi-exon	FALSE	canonical	0	0	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAATGGATGGTGTTA	-35577702	False	NA	NA	False	ATTAAA	-17	NA	35577729	35569814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35569920_35574359_35574699_35577321
transcript_42164.known	chr14	-	580	3	FSM	ENSG00000258704.7	ENST00000556705.6	614	3	34	0	0	0	multi-exon	TRUE	canonical	3	16	junction_2	5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATCTCTAGAGGTT	-34982209	True	NA	NA	False	NA	NA	NA	34982532	34963707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34964041_34969169_34969308_34982423
transcript_42166.known	chr14	-	600	4	FSM	ENSG00000258704.7	ENST00000554945.1	600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	10.6562449087639	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAATCTCTTTTGCATTG	-34982169	True	NA	-3	True	AATAAA	-17	NA	34982492	34963913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_34964041_34969169_34969308_34971941_34972214_34982429
transcript_42167.known	chr14	+	2187	16	FSM	ENSG00000100883.13	ENST00000216774.11	2187	16	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_11	48.5708646092376	3085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTTGTTAACTTTCTTTA	34973689	True	NA	38	True	AATAAA	-23	NA	34982991	35029567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35022909_35023081_35028087_35028184_35029060
transcript_42168.known	chr14	+	491	2	FSM	ENSG00000100883.13	ENST00000553544.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTAAGTAGTGTTTTATT	34973670	True	NA	NA	False	GATAAA	-16	NA	34982972	34996924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983216_34996676
transcript_42169.known	chr14	+	2304	15	FSM	ENSG00000100883.13	ENST00000555746.6	2304	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_13	177.02962971186	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATAAGTTAAGGGGTTG	34982318	True	NA	25	True	AATAAA	-10	NA	34982690	35029554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_34983216_34996676_34996788_34999557_34999650_35000935_35001021_35007282_35007388_35008626_35008694_35008773_35008832_35011508_35011660_35013345_35013495_35013801_35013903_35014743_35014831_35018691_35018766_35018965_35019075_35028087_35028184_35029060
transcript_4217.nnic	chr1	-	847	3	NNC	ENSG00000239636.2	novel	902	3	NA	NA	-56	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATCAATGGATGGTGTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	35577827	35569814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_35569920_35574462_35574699_35577321
transcript_42176.known	chr14	+	6118	7	FSM	ENSG00000100890.16	ENST00000250377.11	6118	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	87.0314438707196	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTTTACTTTTATCATCT	35118495	True	NA	7	True	AATAAA	-21	NA	35122563	35277614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122636_35122951_35124232_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_42178.known	chr14	+	1406	7	FSM	ENSG00000100890.16	ENST00000605870.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	103.215658803411	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAATCATTTATCGTCC	35118653	False	NA	-36	True	NA	NA	NA	35122721	35274017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122911_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_42181.known	chr14	+	789	6	FSM	ENSG00000100890.16	ENST00000557404.3	789	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	109.902502246309	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACCATATGATGAAGACTT	35122735	False	NA	NA	False	NA	NA	NA	35122758	35273485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122911_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434
transcript_42187.nic	chr14	-	1950	14	NIC	ENSG00000092020.11	novel	1511	13	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_13	60.5876547270601	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-35122527	False	NA	-2	True	AATAAA	-26	NA	35122549	35085471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_42191.known	chr14	-	1719	13	FSM	ENSG00000092020.11	ENST00000554222.5	1719	13	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	90.8625335328044	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAAATGTTTTGGTTACTG	-35122425	False	NA	-3	True	AATAAA	-25	NA	35122447	35085472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_42197.known	chr14	-	1402	12	FSM	ENSG00000092020.11	ENST00000553273.5	1402	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	121.955146882941	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGGTTACTGGAATTT	-35122239	False	NA	3	True	AATAAA	-31	NA	35122261	35085466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35121901_35122102_35122221
transcript_42210.known	chr14	+	858	6	FSM	ENSG00000151327.13	ENST00000382406.7	858	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	144.22205101856	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAAAGCCAGATCTGAAA	35041806	True	NA	NA	False	NA	NA	NA	35046377	35081387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35046407_35046504_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_42234.nic	chr14	+	636	3	NIC	ENSG00000151327.13	novel	540	2	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	60.5	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35045998	True	NA	9	True	AATAAA	-27	NA	35046258	35050396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_35046407_35046504_35046629_35050032
transcript_42240.known	chr14	+	3053	5	FSM	ENSG00000151327.13	ENST00000280987.9	3053	5	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	16.1148223694833	713	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATGGTTTGTCTTACTT	35045621	True	NA	10	True	TATAAA	-17	NA	35046271	35083378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35046629_35053277_35053452_35077149_35077217_35078926_35079025_35081021
transcript_42241.known	chr14	+	540	2	FSM	ENSG00000151327.13	ENST00000554052.2	540	2	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTGGGAATTTTGTATCA	35046354	False	NA	9	True	AATAAA	-27	NA	35046452	35050396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35046629_35050032
transcript_42242.known	chr14	-	1511	13	FSM	ENSG00000092020.11	ENST00000261475.10	1511	13	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_12	31.1644384230203	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATGTTTTGGTTACTGG	-35120453	True	NA	-2	True	AATAAA	-26	NA	35121990	35085471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35085779_35087950_35088011_35091069_35091208_35095047_35095185_35096557_35096634_35096708_35096765_35099251_35099385_35107303_35107375_35108138_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901
transcript_42243.known	chr14	-	896	6	FSM	ENSG00000092020.11	ENST00000557278.1	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	70.6399320497974	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTCATTTTTACTGTGC	-35122451	False	NA	NA	False	NA	NA	NA	35122473	35108138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35108237_35109818_35109932_35110524_35110630_35116609_35116738_35121901_35122102_35122221
transcript_42244.known	chr14	+	3857	15	FSM	ENSG00000258790.1	ENST00000557565.1	3857	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1140.50313816458	751	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	35118480	True	NA	NA	False	AATAAA	-22	NA	35122548	35317474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35122636_35122951_35124232_35126734_35126783_35127478_35127612_35180669_35180778_35266726_35266876_35270400_35270597_35273434_35274292_35278552_35278719_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_42258.known	chr14	+	925	6	FSM	ENSG00000100902.11	ENST00000554541.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1035.97247067671	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGCTTTTGGAAAATAATTG	35266542	True	NA	NA	False	AATAAA	-5	NA	35292348	35317457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_42260.known	chr14	+	364	2	FSM	ENSG00000100902.11	ENST00000628955.1	364	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATACGTTAAACAAACGG	35266510	True	NA	NA	False	NA	NA	NA	35292316	35293080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35292952
transcript_42262.known	chr14	+	814	6	FSM	ENSG00000100902.11	ENST00000554961.5	814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1019.2628709023	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATCCTGTTGTTTTCAC	35266586	True	NA	NA	False	AATAAA	-22	NA	35292392	35317474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35314360_35314456_35317248
transcript_42263.known	chr14	+	1002	7	FSM	ENSG00000100902.11	ENST00000555764.5	1002	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	967.179476048209	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCCTATTTTAAAATTTAT	35266644	True	NA	NA	False	AATAAA	-41	NA	35292450	35317493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292601_35307993_35308089_35308913_35308996_35310739_35310896_35312880_35313060_35314360_35314456_35317248
transcript_42264.known	chr14	+	879	7	FSM	ENSG00000100902.11	ENST00000553809.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_4	935.425393426256	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTGTTTGGTAACAACAAA	35266591	True	NA	NA	False	ACTAAA	-41	NA	35292397	35317347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35292553_35307993_35308089_35308913_35308996_35310739_35310896_35312862_35313060_35314360_35314456_35317248
transcript_42265.known	chr14	-	1400	6	FSM	ENSG00000100906.11	ENST00000557140.5	1400	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	52.6178676876971	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATTTATTAAACAGATTT	-35403149	True	NA	3	True	NA	NA	NA	35404746	35401539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35402061_35402393_35402535_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_42267.known	chr14	-	1559	6	FSM	ENSG00000100906.11	ENST00000216797.10	1559	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	19.5959179422654	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATCCTGATCATTTT	-35403152	True	NA	-14	True	ATTAAA	-15	NA	35404749	35401512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689_35403799_35404417
transcript_42270.known	chr14	-	1537	5	FSM	ENSG00000100906.11	ENST00000557389.1	1537	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	17.3205080756888	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTATATTTATTAAACA	-35404090	False	NA	-2	True	NA	NA	NA	35404140	35401544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_35402061_35402393_35402664_35402770_35402860_35403149_35403361_35403689
transcript_42274.known	chr14	+	1544	11	FSM	ENSG00000100916.14	ENST00000552677.5	1544	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	63.9240956134696	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGGCCGATAGAATGT	35824786	True	NA	NA	False	TTTAAA	-36	NA	35826440	35870860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35826659_35829794_35829908_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_42279.known	chr14	+	2637	10	FSM	ENSG00000100916.14	ENST00000216807.12	2637	10	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_6	11.255725566337	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTAGTGTCTTGGATTAC	35824683	True	NA	3	True	AATAAA	-20	NA	35826337	35871963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_35826659_35831409_35831501_35832977_35833106_35834843_35834924_35862589_35862687_35863869_35863954_35864934_35865000_35865721_35865762_35867905_35868033_35870359
transcript_4228.known	chr1	-	2628	2	FSM	ENSG00000142686.8	ENST00000270815.5	2628	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTTGAGTATGTGTTT	-35718413	True	NA	NA	False	AATAAA	-17	NA	35718884	35713876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35716327_35718706
transcript_4229.nic	chr1	-	2243	11	ISM	ENSG00000092853.14	ENST00000318121.8	8512	25	-52	17645	-52	-2792	5prime_fragment	FALSE	canonical	3	61	junction_1	24.4550608259313	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGATAAAGAAAATAATGAT	-35767611	True	NA	NA	False	AATAGA	-21	NA	35770030	35749756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_42295.known	chr14	-	1586	9	FSM	ENSG00000151332.20	ENST00000318473.11	1586	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	94.8248385181857	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATCCCTTTGACGGTGTG	-36316124	True	NA	-12	True	AATAAA	-14	NA	36320627	36298567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_36299188_36300784_36300824_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_42296.known	chr14	-	1449	8	FSM	ENSG00000151332.20	ENST00000359527.11	1449	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	117.246295794584	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATAAACAATAGATCCA	-36316104	True	NA	-34	True	NA	NA	NA	36320607	36298589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_36299191_36300784_36300824_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_42297.known	chr14	-	952	7	FSM	ENSG00000151332.20	ENST00000605579.5	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_3	31.831588084794	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTGATCTATAAGCAAAACA	-36316074	True	NA	NA	False	AATGAA	-44	NA	36320577	36308016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_42298.known	chr14	-	1809	10	NNC	ENSG00000151332.20	novel	1603	9	NA	NA	0	-1	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	147.363328604114	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTTTGACGGTGTGACT	-36316121	True	NA	-9	True	AATAAA	-17	NA	36320624	36298564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_36299191_36300784_36300827_36305088_36305306_36308091_36308190_36311572_36311726_36311958_36312025_36314511_36314609_36314690_36314916_36316692_36316813_36320459
transcript_42306.known	chr14	+	1924	1	FSM	ENSG00000258708.1	ENST00000556667.1	1924	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	125	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTTTGAAAATGTTTACC	37171874	False	NA	24	True	AATAAA	-36	NA	37171887	37173811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_37171900_37173800
transcript_42308.known	chr14	+	5983	13	FSM	ENSG00000151338.19	ENST00000684589.1	5983	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	5.55965126804031	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACATATTTCAATGCAATTC	37196854	True	NA	9	True	AATAAA	-21	NA	37197936	37551259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_37198105_37247102_37247241_37247828_37247908_37266937_37267170_37268657_37268794_37270419_37270526_37285317_37285448_37308055_37308090_37308348_37308520_37369516_37369625_37422854_37422950_37499907_37500139_37546904
transcript_4231.nic	chr1	-	2684	8	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-102	22992	-52	-12432	5prime_fragment	FALSE	canonical	3	99	junction_4	17.2165084516375	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGTATTTTCTTAAAG	-35767611	True	NA	-6	True	AATAAA	-16	NA	35770030	35759396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_42346.nnic	chr14	+	1228	5	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	32.5998466254061	46	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38190907	False	NA	18	True	AATAAA	-26	NA	38190946	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38193240_38193324_38196740_38196991_38199045_38199512_38202781
transcript_42354.nnic	chr14	+	1172	4	NIC	ENSG00000258649.2	novel	1017	4	NA	NA	-173	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_1	26.1448954015034	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38190793	False	NA	18	True	AATAAA	-26	NA	38190809	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193183_38193324_38199045_38199512_38202781
transcript_42358.nnic	chr14	+	1091	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_2	14.2672897060218	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38190817	False	NA	18	True	AATAAA	-26	NA	38190833	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193240_38193324_38199045_38199512_38202781
transcript_42359.nnic	chr14	+	877	4	NIC	ENSG00000258649.2	novel	939	4	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_2	29.4882274061286	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38190899	True	NA	18	True	AATAAA	-26	NA	38190938	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193240_38193324_38199154_38199512_38202781
transcript_42363.nnic	chr14	+	1125	4	NNC	ENSG00000258649.2	novel	859	3	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.1350936571711	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185347	True	NA	18	True	AATAAA	-26	NA	38190966	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38196740_38196991_38199045_38199512_38202781
transcript_4237.nic	chr1	-	897	4	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-102	26762	-52	-16202	5prime_fragment	FALSE	canonical	3	107	junction_1	18.7082869338697	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACAAGGCAAGTAAAGCAT	-35767611	True	NA	NA	False	AGTAAA	-4	NA	35770030	35763166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_35763322_35764265_35764715_35765217_35765327_35769846
transcript_42376.known	chr14	+	531	3	FSM	ENSG00000258649.2	ENST00000555655.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	6.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	38185363	True	NA	16	True	AATAAA	-24	NA	38190982	38202923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_38191232_38193183_38193324_38202781
transcript_42379.nnic	chr14	+	904	3	NNC	ENSG00000258649.2	novel	939	4	NA	NA	-149	-6432	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	19	148	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	38190817	False	NA	9	True	NA	NA	NA	38190833	38196491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38193240_38193324_38196068
transcript_4238.nic	chr1	-	723	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-102	27880	-52	-17320	5prime_fragment	FALSE	canonical	3	137	junction_2	7.5	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGGAAACAAAAAACCAGG	-35767611	True	NA	13	True	NA	NA	NA	35770030	35764284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_42381.nnic	chr14	+	623	3	NIC	ENSG00000258649.2	novel	531	3	NA	NA	-149	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_2	26.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTAGACTCCTGCCTCAA	38190817	False	NA	16	True	AATAAA	-24	NA	38190833	38202923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38193240_38193324_38202781
transcript_42383.nnic	chr14	+	875	3	FSM	ENSG00000258649.2	ENST00000689498.1	859	3	-16	0	-16	0	multi-exon	FALSE	canonical	3	30	junction_1	27	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185347	True	NA	18	True	AATAAA	-26	NA	38190966	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_38191232_38199045_38199512_38202781
transcript_42387.nnic	chr14	+	751	3	NIC	ENSG00000258649.2	novel	859	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	41	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_38191232_38199154_38199512_38202781
transcript_42388.nnic	chr14	+	495	3	NNC	ENSG00000258649.2	novel	859	3	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	40.5	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGACTCCTGCCTCAACA	38185362	True	NA	18	True	AATAAA	-26	NA	38190981	38202925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38199410_38199512_38202781
transcript_4239.nic	chr1	-	671	3	ISM	ENSG00000092853.14	ENST00000373220.7	3977	24	-102	27932	-52	-17372	5prime_fragment	FALSE	canonical	3	137	junction_2	7.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGACTTGAGAAAGAGGAG	-35767611	True	NA	-39	True	AGTAAA	-9	NA	35770030	35764336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_35764715_35765217_35765327_35769846
transcript_42395.nnic	chr14	+	1143	2	NNC	ENSG00000258649.2	novel	531	3	NA	NA	-95	-5384	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGCTAAAAATTTCATA	38190871	False	NA	NA	False	AGTAAA	-29	NA	38190887	38197539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38196740
transcript_42397.nnic	chr14	+	714	2	NNC	ENSG00000258649.2	novel	531	3	NA	NA	-45	-6432	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	38190898	True	NA	9	True	NA	NA	NA	38190937	38196491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_38191232_38196071
transcript_42398.known	chr14	-	3843	20	FSM	ENSG00000100934.15	ENST00000307712.11	3843	20	0	0	0	0	multi-exon	FALSE	canonical	3	486	junction_15	58.860226943068	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGGCTATTTTGAAATC	-39097049	True	NA	-15	True	AATAAA	-18	NA	39103235	39031918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39033329_39039030_39039097_39040731_39040888_39042785_39042873_39045162_39045325_39048651_39048730_39055142_39055297_39061764_39061872_39063323_39063414_39064912_39064994_39067172_39067297_39074414_39074531_39075934_39076094_39085761_39085907_39086928_39087009_39091476_39091714_39092540_39092628_39093186_39093245_39095897_39096140_39103031
transcript_42401.known	chr14	+	825	10	FSM	ENSG00000092208.19	ENST00000412033.7	825	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	125.825668150152	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCCAATTCAAGTACAG	39110321	True	NA	NA	False	NA	NA	NA	39114305	39136541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114396_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_4241.known	chr1	-	4769	25	FSM	ENSG00000092853.14	ENST00000251195.9	4769	25	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	28.5105974449268	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCCTGTTTTTGCATAT	-35767548	True	NA	NA	False	CATAAA	-14	NA	35769967	35720217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35720981_35736913_35737076_35737338_35737422_35737991_35738098_35738454_35738583_35739135_35739258_35739364_35739530_35743140_35743242_35743454_35743531_35745450_35745563_35746765_35746993_35747906_35748062_35748404_35748605_35749466_35749532_35749632_35749812_35751249_35751507_35753744_35753937_35760341_35760917_35761095_35761205_35761997_35762071_35762403_35762482_35763159_35763322_35764265_35764715_35765217_35765327_35769846
transcript_42411.known	chr14	+	1320	10	FSM	ENSG00000092208.19	ENST00000308317.12	1320	10	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_5	29.3030146344479	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCAGCACTTTTTTTTTTT	39110338	True	NA	4	True	AATAAA	-22	NA	39114322	39136973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_42412.known	chr14	+	1094	9	FSM	ENSG00000092208.19	ENST00000250379.13	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	122.823043440553	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTTTTTGTTTTTTGTT	39110321	True	NA	26	True	NA	NA	NA	39114305	39136775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39128279_39128349_39131957_39132069_39133660_39133720_39136439
transcript_42413.known	chr14	+	659	5	FSM	ENSG00000092208.19	ENST00000525430.1	659	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	25.6161570107618	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAACAAATAATATGTGGC	39110339	True	NA	NA	False	AGTAAA	-3	NA	39114323	39122701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429
transcript_42414.known	chr14	+	801	9	FSM	ENSG00000092208.19	ENST00000396249.7	801	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	121.828709157571	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAGAAGATATTTCTCAT	39110321	True	NA	NA	False	NA	NA	NA	39114305	39136496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39114476_39114828_39114914_39117998_39118089_39118539_39118600_39122429_39122544_39124991_39125037_39128279_39128349_39131957_39132069_39136439
transcript_42417.known	chr14	-	3251	6	FSM	ENSG00000182400.15	ENST00000330149.10	3251	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_2	12.1095004025765	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACTTTCGTGATTTTGT	-39167257	True	NA	-5	True	AATAAA	-19	NA	39170333	39147813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159482_39159551_39170014
transcript_42418.known	chr14	-	1000	6	FSM	ENSG00000182400.15	ENST00000555269.5	1000	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	44.8972159493214	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCCCTTATTTTAAACC	-39167277	True	NA	50	True	AATGAA	-33	NA	39170353	39150117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39150382_39151745_39151840_39154210_39154295_39158284_39158403_39159449_39159551_39170014
transcript_42423.known	chr14	-	3229	5	FSM	ENSG00000182400.15	ENST00000347691.9	3229	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	42.0535373066286	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACTTTCGTGATTTTGTGG	-39167317	True	NA	-3	True	AATAAA	-21	NA	39170393	39147811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39150382_39151745_39151840_39158284_39158403_39159482_39159551_39170014
transcript_42429.known	chr14	-	541	4	FSM	ENSG00000182400.15	ENST00000554018.1	541	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	43.667938912764	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTGGGAATAAAAAGTATT	-39167253	True	NA	NA	False	NA	NA	NA	39170329	39151796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39151840_39158284_39158403_39159482_39159551_39170017
transcript_42430.known	chr14	+	3537	9	FSM	ENSG00000100941.9	ENST00000216832.9	3537	9	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_8	42.3170695464608	1531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTTGCACAGCAATCTG	39165496	True	NA	5	True	ATTAAA	-15	NA	39175253	39183220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411_39177485_39177592_39177688_39177840_39177917_39179090_39179247_39179323_39179463_39180502
transcript_42431.known	chr14	+	601	4	FSM	ENSG00000100941.9	ENST00000556530.1	601	4	0	0	0	0	multi-exon	FALSE	canonical	3	689	junction_2	23.3666428910958	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTAGTGAAATAATGCAG	39165472	True	NA	55	True	NA	NA	NA	39175229	39177708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39175393_39176077_39176150_39176526_39176596_39177411
transcript_42432.known	chr14	-	530	2	FSM	ENSG00000259083.1	ENST00000556537.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGACTTAGCCAAGCCTC	NA	False	NA	NA	False	NA	NA	NA	39175880	39174884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39175313_39175778
transcript_42436.known	chr14	+	2526	24	FSM	ENSG00000150527.18	ENST00000556148.5	2526	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	34.1810480437423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTTATGAGTAAATTATT	39264696	True	NA	NA	False	AATAAA	-16	NA	39267410	39350421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39267523_39276933_39276956_39279336_39279359_39279448_39279538_39291018_39291112_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_42438.known	chr14	+	3860	24	FSM	ENSG00000150527.18	ENST00000280083.7	3860	24	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_18	17.0667542924657	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AACAAAAAACTAAAAAGAAA	39267114	False	NA	NA	False	AAAACA	-4	NA	39267145	39351395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39320927_39321057_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_42443.known	chr14	+	2762	23	FSM	ENSG00000150527.18	ENST00000348007.7	2762	23	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_18	19.1583764559984	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGGCTCTATTAACTTTT	39264699	True	NA	19	True	AATAAA	-20	NA	39267413	39350694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39267523_39276933_39277066_39279336_39279359_39279448_39279538_39291018_39291097_39293270_39293382_39293999_39294072_39294924_39295030_39299863_39299987_39302128_39302250_39303477_39303525_39304290_39304382_39308448_39308588_39313339_39313442_39314738_39314800_39315682_39315719_39317943_39318012_39319208_39319292_39326863_39327023_39345903_39346027_39347712_39347772_39348742_39348978_39350097
transcript_4245.known	chr1	+	1035	6	FSM	ENSG00000126070.20	ENST00000397828.3	1035	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	31.7716855076969	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAGAGGAGAAAAAACTAAT	35929870	True	NA	NA	False	NA	NA	NA	35931081	35982652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374_35973512_35982620
transcript_42451.known	chr14	-	1359	1	FSM	ENSG00000258940.2	ENST00000605298.1	1359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTCGGAAGACTCCAGA	-39267024	True	NA	-8	True	AATAAA	-21	NA	39267061	39265702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39265700_39267100
transcript_42452.known	chr14	-	3853	4	FSM	ENSG00000165355.8	ENST00000298097.8	3771	4	-67	-15	-34	15	multi-exon	FALSE	canonical	3	42	junction_3	7.36357401145817	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTAGTATTCTGGTTGT	-39432484	False	NA	NA	False	AATAAA	-31	NA	39432500	39397668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_39399788_39401175_39401862_39402400_39402512_39431563
transcript_42457.nic	chr14	+	767	3	FSM	ENSG00000258526.8	ENST00000685977.1	732	3	-35	0	-22	0	multi-exon	FALSE	canonical	3	8	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGAGGAACTTGTTATG	39432545	False	NA	NA	False	AATAAA	-24	NA	39432576	39470743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39432676_39433487_39433730_39470317
transcript_42458.nnic	chr14	+	325	3	NIC	ENSG00000258526.8	novel	1424	3	NA	NA	-2	-1	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTCTGGGAATTTATTC	39432188	True	NA	NA	False	AATAAA	-15	NA	39432596	39513779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_39432676_39470317_39470401_39513616
transcript_42463.known	chr14	+	823	2	FSM	ENSG00000258526.8	ENST00000666503.1	823	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAGGAGAGAGGTAAGCT	39432222	True	NA	NA	False	AGTAAA	-2	NA	39432630	39471095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_39432676_39470317
transcript_42466.known	chr14	-	869	3	FSM	ENSG00000286123.1	ENST00000652631.1	869	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTTTATTTTAATAAA	-40348312	False	NA	NA	False	AATAAA	-20	NA	40348331	40267282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_40267565_40286815_40286951_40347879
transcript_4247.nic	chr1	+	867	5	ISM	ENSG00000126070.20	ENST00000397828.3	1035	6	217	9060	41	0	5prime_fragment	FALSE	canonical	3	93	junction_2	10.6858551365813	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	35931182	True	NA	9	True	CATAAA	-18	NA	35931298	35973592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_35931446_35945691_35945864_35966954_35967076_35972023_35972233_35973374
transcript_4248.known	chr1	+	548	3	FSM	ENSG00000126070.20	ENST00000491443.2	548	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACTGGTGTCTCGAAGTA	NA	False	NA	9	True	CATAAA	-18	NA	35966954	35973592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_35967076_35972023_35972233_35973374
transcript_4249.known	chr1	+	1490	10	FSM	ENSG00000092850.12	ENST00000207457.8	1490	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.4569664858009	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCGGCTGTTCTCTGCCCC	36083973	True	NA	2	True	AATAAA	-15	NA	36084093	36088275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36084150_36084869_36085078_36085162_36085289_36085835_36086042_36086703_36086848_36086930_36087046_36087203_36087312_36087438_36087583_36087727_36087808_36087972
transcript_42507.nnic	chr14	+	684	5	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-231	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	66.7083203206317	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	40954436	False	NA	-1	True	AATAAA	-11	NA	40954461	41149309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954677_40954822_40954953_40962789_40962843_40974339_40974391_41149074
transcript_42518.known	chr14	+	696	4	FSM	ENSG00000251363.3	ENST00000515218.2	696	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	74.5534856477028	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTACAACTTGCTGATAG	40953338	False	NA	NA	False	AATAAA	-35	NA	40954897	40975877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_40975340
transcript_4252.nnic	chr1	+	1543	5	NIC	ENSG00000116863.11	novel	1651	6	NA	NA	11	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	131.078936141548	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	36085878	True	NA	20	True	AATAAA	-20	NA	36088902	36093932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_36089116_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_42530.nnic	chr14	+	804	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-288	-42861	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	67.0721005088305	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTGCTTCTCAATGACT	NA	False	NA	NA	False	AATAAA	-3	NA	40954404	41106448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41106296
transcript_42531.nnic	chr14	+	873	4	NNC	ENSG00000251363.3	novel	599	4	NA	NA	-288	-8255	at_least_one_novel_splicesite	FALSE	canonical	3	60	junction_3	51.6978400580398	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGACACTTCGTTC	NA	False	NA	0	True	AATAAA	-22	NA	40954404	41141054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_40954953_40962789_40962843_40974339_40974391_41140833
transcript_42532.known	chr14	+	599	4	FSM	ENSG00000251363.3	ENST00000651006.1	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	46.5999523128034	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATTTTCACAATTTGAA	40953133	True	NA	-1	True	AATAAA	-11	NA	40954692	41149309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_40954953_40962789_40962843_40974339_40974391_41149074
transcript_4254.known	chr1	+	1651	6	FSM	ENSG00000116863.11	ENST00000373178.5	1651	6	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	28.175166370405	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACTGTTTCTTGTTTCTCC	36085867	True	NA	20	True	AATAAA	-20	NA	36088891	36093932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36089116_36091243_36091341_36091617_36091826_36091909_36092095_36092421_36092523_36093096
transcript_42565.known	chr14	-	4933	3	FSM	ENSG00000258636.2	ENST00000661475.1	4933	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATAGGTATATGGTTT	-41604971	False	NA	NA	False	AATAAA	-4	NA	41604988	41583656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_41588288_41597199_41597267_41604753
transcript_42567.known	chr14	-	530	2	FSM	ENSG00000258636.2	ENST00000557067.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATATCCCATTAAAAAGT	-41604839	False	NA	NA	False	AATAAA	-7	NA	41604856	41587860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_41588288_41604753
transcript_42570.known	chr14	+	4417	6	FSM	ENSG00000165379.14	ENST00000298119.9	4417	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	4.60434577328853	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATTGCCTGATTTG	41606862	True	NA	10	True	AATAAA	-19	NA	41606875	41904549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_41608563_41766853_41767030_41886605_41888011_41891249_41891963_41898916_41898961_41904157
transcript_42572.known	chr14	-	693	2	FSM	ENSG00000258633.1	ENST00000554389.1	693	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTTTGATATTACAAT	-44897061	False	NA	NA	False	AATACA	-17	NA	44897077	44876873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_44877501_44897011
transcript_42573.known	chr14	+	2935	5	FSM	ENSG00000179476.8	ENST00000325192.8	2935	5	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	6.05702071979286	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGGCTCCCAGATTTTC	44896609	True	NA	17	True	AATAAA	-30	NA	44897274	44907257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_44897569_44900434_44900960_44903206_44903297_44904394_44904530_44905366
transcript_42577.known	chr14	-	360	3	FSM	ENSG00000258949.1	ENST00000555157.1	360	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATTTGTGTAAGAAACT	-44911850	False	NA	NA	False	AATAAA	-17	NA	44911863	44898907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_44899077_44899229_44899314_44911756
transcript_42579.known	chr14	-	6522	5	FSM	ENSG00000179454.14	ENST00000396128.9	6522	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	5.35607132140714	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATATGTCATATGAT	-44960051	True	NA	-13	True	AATAAA	-14	NA	44961947	44924323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_44929192_44931332_44931542_44934114_44934559_44945029_44945929_44961845
transcript_4258.known	chr1	-	1056	5	FSM	ENSG00000054116.12	ENST00000373162.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	212.927804666277	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACTGCGATATAGTCCAT	-36146462	True	NA	-24	True	AATAAA	-4	NA	36149497	36137053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149091
transcript_42587.nnic	chr14	-	455	4	NNC	ENSG00000179454.14	novel	656	3	NA	NA	-1	7546	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.490737563232	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTAGTATTCTGT	-44960072	True	NA	NA	False	AATAAA	-21	NA	44961968	44937686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_44937813_44945029_44945116_44945808_44945929_44961845
transcript_4259.known	chr1	-	951	5	FSM	ENSG00000054116.12	ENST00000373163.5	951	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	228.815837520046	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGCTCAAACCATTTTAC	-36146416	True	NA	85	True	GGGGCT	-29	NA	36149451	36136944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149259
transcript_42591.nic	chr14	-	2275	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-21	8982	-1	-4493	5prime_fragment	FALSE	canonical	3	21	junction_1	6	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAAGATTGTATCT	-44960072	True	NA	NA	False	AAAAAG	-8	NA	44961968	44933305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_42594.nic	chr14	-	2023	3	ISM	ENSG00000179454.14	ENST00000396128.9	6522	5	-21	9234	-1	-4745	5prime_fragment	FALSE	canonical	3	21	junction_1	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGAAGTAACTAGTTATA	-44960072	True	NA	-24	True	AATAAA	-27	NA	44961968	44933557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_44934559_44945029_44945929_44961845
transcript_42597.nnic	chr14	-	1148	3	NNC	ENSG00000179454.14	novel	847	3	NA	NA	-1	7546	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	9	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTAGTATTCTGT	-44960072	True	NA	NA	False	AATAAA	-21	NA	44961968	44937686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_44937813_44945029_44945929_44961845
transcript_42600.known	chr14	-	849	2	FSM	ENSG00000249163.3	ENST00000556389.1	849	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTCTCTCCCTTTAAGAT	NA	False	NA	NA	False	AATAAA	-22	NA	45083977	45083044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45083388_45083471
transcript_42609.known	chr14	+	3174	15	FSM	ENSG00000185246.18	ENST00000424478.5	3174	15	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	92.8042706617601	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATGAATTTATTTTG	45080390	True	NA	16	True	AATAAA	-21	NA	45084127	45115601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096423_45096759_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_42615.known	chr14	+	3532	14	FSM	ENSG00000185246.18	ENST00000355765.11	3532	14	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_3	51.6275922741287	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGCCTCTCCCCTACCC	45080378	True	NA	NA	False	NA	NA	NA	45084115	45116282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45084250_45095220_45095564_45096102_45096229_45096886_45097006_45102528_45102697_45107450_45107617_45108414_45108523_45109615_45109781_45110093_45110221_45110548_45110818_45112317_45112503_45114182_45114258_45114493_45114615_45114856
transcript_42631.known	chr14	-	643	6	FSM	ENSG00000100442.11	ENST00000557324.5	643	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1320.94278452929	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTAGGCAAAGTTATCAGA	-45116205	True	NA	NA	False	AAGAAA	-29	NA	45134483	45120909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45133322_45133440_45134348
transcript_42637.known	chr14	+	645	2	FSM	ENSG00000185246.18	ENST00000556782.5	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTTGTAGAGAGTCAGT	45080380	True	NA	-93	True	NA	NA	NA	45084117	45095733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45084250_45095220
transcript_42638.known	chr14	-	1299	7	FSM	ENSG00000100442.11	ENST00000396062.4	1299	7	0	0	0	0	multi-exon	FALSE	canonical	3	2472	junction_2	138.357929540257	6501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATGAGTCTTCCGTTTT	-45116203	True	NA	-4	True	AATAAA	-15	NA	45134481	45115598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45116253_45118027_45118126_45120886_45120955_45121484_45121621_45129793_45129902_45130698_45130801_45134348
transcript_42639.known	chr14	+	7131	23	FSM	ENSG00000187790.11	ENST00000267430.10	7131	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	8.14588067067192	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCGGGTTATTTCTTC	45134398	True	NA	NA	False	ATTAAA	-21	NA	45135929	45200890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
transcript_42640.known	chr14	+	2354	11	FSM	ENSG00000187790.11	ENST00000556036.5	2354	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	6.7446274915669	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAGAAAACAGTTTT	45134408	True	NA	NA	False	ATTAAA	-42	NA	45135939	45167423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45136540_45137068_45137242_45140631_45140710_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949
transcript_42641.known	chr14	+	6167	22	FSM	ENSG00000187790.11	ENST00000542564.6	6167	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	11.1275841606209	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCAAAGACCTCTCACAA	45134422	True	NA	NA	False	NA	NA	NA	45135953	45200028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45136540_45137068_45137242_45148836_45148996_45151396_45151529_45153919_45154053_45154696_45154823_45155372_45155460_45159095_45159281_45164358_45164566_45166949_45167164_45170588_45170747_45173054_45173211_45175070_45176977_45181429_45181525_45181636_45181706_45183773_45183903_45185216_45185374_45187780_45187888_45188801_45189363_45196171_45196548_45198643_45198936_45199869
transcript_42642.known	chr14	-	4577	17	FSM	ENSG00000129534.14	ENST00000310806.9	4577	17	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_14	45.4549485067358	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTCTTGTTTTTTGTT	-45245395	True	NA	-11	True	AATAAA	-21	NA	45253202	45203189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45204213_45204398_45204454_45206082_45206171_45210379_45210529_45217018_45217180_45218281_45218455_45223917_45224747_45226742_45226837_45227662_45227815_45231140_45231299_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_42649.known	chr14	-	1950	8	FSM	ENSG00000129534.14	ENST00000627697.1	1950	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	100.666959498605	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCCTGTCTCAGCCTCCC	-45253380	False	NA	NA	False	NA	NA	NA	45253402	45232572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45232628_45232732_45232821_45235813_45235945_45237647_45237722_45242033_45242519_45242760_45242875_45246742_45247378_45253034
transcript_42650.known	chr14	+	351	1	FSM	ENSG00000258608.1	ENST00000555084.1	351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAATGTATGATGAATTT	NA	False	NA	NA	False	AATGAA	-37	NA	45290035	45290386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_45290000_45290400
transcript_42651.known	chr14	-	531	3	FSM	ENSG00000258616.5	ENST00000554711.5	531	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGAATGCTTGGACTAC	NA	False	NA	NA	False	AATAAA	-21	NA	45715487	45706257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45706503_45714283_45714432_45715349
transcript_42652.known	chr14	-	486	3	FSM	ENSG00000258616.5	ENST00000557602.1	486	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGACTACTTTTGTAT	NA	False	NA	NA	False	AATAAA	-29	NA	45714453	45706249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_45706503_45707835_45707899_45714283
transcript_42658.nnic	chr14	-	1271	5	NNC	ENSG00000139915.21	novel	757	4	NA	NA	25078	1170	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.66077672302228	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATGTCATTTTTGTCTGAC	NA	False	NA	NA	False	AATAAA	-1	NA	47106760	47034018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_47034202_47035010_47035305_47061248_47061579_47096853_47097124_47106566
transcript_42660.nnic	chr14	+	886	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	24	junction_1	19.5	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	47104524	47108729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47106573_47106733_47108307
transcript_42663.nnic	chr14	+	791	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	6	junction_1	28.5	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	47104562	47108729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47106630_47106733_47108307
transcript_42666.nnic	chr14	+	972	3	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	9	junction_1	27	137	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTTTGGTGCTCTCTTC	NA	False	NA	NA	False	AATAAA	-22	NA	47104567	47108729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47106444_47106733_47108307
transcript_42668.nnic	chr14	+	483	2	Antisense	novelGene_ENSG00000139915.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	20	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTGTCCGACTGATCTC	NA	False	NA	NA	False	CATAAA	-22	NA	47104525	47107654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_+_47104830_47107475
transcript_42687.nnic	chr14	-	1565	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2509	513	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	163	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTCTTTCTTTAGCACT	NA	False	NA	1	True	AATAAA	-18	NA	48268118	48261507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_42689.nnic	chr14	-	1304	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2509	252	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	151	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGCCCTAAATCTTGC	NA	False	NA	-11	True	ATTAAA	-19	NA	48268118	48261768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_42692.nnic	chr14	-	641	3	NNC	ENSG00000287492.1	novel	512	2	NA	NA	-2509	-411	at_least_one_novel_splicesite	FALSE	canonical	3	81	junction_1	2.5	133	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	NA	False	NA	2	True	AATAAA	-22	NA	48268118	48262431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_48262484_48265560_48265755_48267723
transcript_4270.known	chr1	-	1114	3	FSM	ENSG00000054116.12	ENST00000616074.4	1114	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	260	695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	-36149494	False	NA	0	True	AATAAA	-28	NA	36149514	36136569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36149336
transcript_42724.known	chr14	-	488	3	FSM	ENSG00000213741.11	ENST00000557111.5	488	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8942	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	-49598676	False	NA	-35	True	AATAAA	-13	NA	49598690	49583578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949_49586050_49598399
transcript_42728.known	chr14	-	403	1	FSM	ENSG00000244270.1	ENST00000497398.1	403	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGAATGTGTTTGTTTT	-49550866	False	NA	-48	True	NA	NA	NA	49577794	49577391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49577400_49577800
transcript_42729.known	chr14	+	299	1	FSM	ENSG00000276168.1	ENST00000618786.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTGAACAATAAATACGTTA	49576213	True	NA	10	True	NA	NA	NA	49586579	49586878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49586600_49586900
transcript_42730.known	chr14	+	579	1	FSM	ENSG00000258568.1	ENST00000555758.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAGGATCAAGATGTATA	49599981	False	NA	NA	False	AAGAAA	-19	NA	49599993	49600572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49600000_49600600
transcript_42731.known	chr14	-	295	3	FSM	ENSG00000213741.11	ENST00000245458.11	295	3	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	2690.5	394240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTTTATGAGTGTTCT	-49559452	True	NA	-33	True	AATAAA	-15	NA	49586380	49583576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949_49586050_49586284
transcript_42732.known	chr14	-	844	2	FSM	ENSG00000213741.11	ENST00000554075.2	844	2	0	0	0	0	multi-exon	FALSE	canonical	3	23265	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCCGGTTCAAGCGATTC	-49559448	True	NA	NA	False	NA	NA	NA	49586376	49585297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49586050_49586284
transcript_42733.known	chr14	-	499	2	FSM	ENSG00000213741.11	ENST00000557367.2	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	17884	junction_1	0	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCAGTTTATGAGTGTT	-49559423	True	NA	-35	True	AATAAA	-13	NA	49586351	49583578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49583676_49585949
transcript_42734.known	chr14	+	957	3	FSM	ENSG00000165501.17	ENST00000318317.8	957	3	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_2	128.5	2368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTGGTGTTAACTTTTT	49598746	False	NA	8	True	ATTAAA	-15	NA	49598760	49614670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49599204_49602369_49602469_49614255
transcript_42735.known	chr14	+	1502	4	FSM	ENSG00000165501.17	ENST00000298288.11	1502	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	96.858430482615	989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTGTTAACTTTTTTT	49592057	True	NA	10	True	ATTAAA	-17	NA	49598939	49614672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49599204_49602369_49602469_49607399_49608122_49614255
transcript_42736.known	chr14	-	333	3	FSM	ENSG00000213741.11	ENST00000557519.1	333	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11632	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAAGTTTTTTTTTTTTT	-49559397	False	NA	NA	False	AATATA	-16	NA	49586325	49585389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49585582_49585949_49586050_49586284
transcript_4274.known	chr1	-	221	2	FSM	ENSG00000054116.12	ENST00000469757.1	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCCGGATGAGATTCATC	-36146461	True	NA	NA	False	NA	NA	NA	36149496	36137261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36149336
transcript_42743.known	chr14	-	676	2	FSM	ENSG00000165502.7	ENST00000298289.7	676	2	0	0	0	0	multi-exon	FALSE	canonical	3	5859	junction_1	0	38836	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCTTAGAAGGATCTTTA	-49559862	True	NA	NA	False	CATAAA	-7	NA	49620626	49618529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49619141_49620561
transcript_42744.known	chr14	-	2469	2	FSM	ENSG00000258377.1	ENST00000555043.1	2469	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAACCCGCAACTGCCCCG	NA	False	NA	NA	False	NA	NA	NA	49623480	49620814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49621049_49621245
transcript_42745.known	chr14	+	2683	1	FSM	ENSG00000168282.6	ENST00000305386.4	2683	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCTGTGCAAGAAACTGT	49617407	True	NA	7	True	AATAAA	-21	NA	49620798	49623481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49620800_49623500
transcript_42749.known	chr14	-	2977	3	FSM	ENSG00000165506.15	ENST00000298292.13	2977	3	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	20.5	746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635192	True	NA	-15	True	AATAAA	-20	NA	49635244	49625173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49626049_49628011_49628156_49633286
transcript_42752.known	chr14	-	2819	2	FSM	ENSG00000165506.15	ENST00000406043.3	2819	2	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	0	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTTTGTCACACAAAGT	-49635178	True	NA	-15	True	AATAAA	-20	NA	49635230	49625173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49626049_49633286
transcript_42757.known	chr14	-	1692	19	FSM	ENSG00000100479.13	ENST00000216367.10	1692	19	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	11.1366373451785	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATGTTCTGCTTAAATTTG	-49687433	True	NA	-13	True	AATAAA	-17	NA	49688214	49643554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_42763.known	chr14	-	1568	18	FSM	ENSG00000100479.13	ENST00000556584.5	1568	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	25.0436297489693	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATATTACAATAAAATTAT	-49687416	True	NA	-44	True	AAGAAA	-42	NA	49688197	49643585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49643671_49647292_49647361_49650264_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664664_49665093_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49679724_49679801_49683592_49683694_49688135
transcript_4277.known	chr1	-	1282	5	FSM	ENSG00000054116.12	ENST00000373166.8	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	476	junction_4	35.5598087733891	2699	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCCTGTTTTCTTTCT	-36146451	True	NA	-2	True	AATAAA	-26	NA	36149486	36136571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139820_36140068_36140167_36149336
transcript_42774.known	chr14	-	1581	17	FSM	ENSG00000100479.13	ENST00000554396.5	1581	17	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	10.8985019039316	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGATTATTGTCGAAGT	-49687429	True	NA	39	True	AATATA	-6	NA	49688210	49650187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49650442_49651268_49651378_49653989_49654068_49654154_49654215_49654783_49654839_49655004_49655095_49655670_49655844_49663314_49663388_49664625_49664675_49665106_49665164_49666329_49666414_49669523_49669599_49674122_49674217_49674349_49674428_49679724_49679801_49683592_49683694_49688135
transcript_4278.known	chr1	-	1336	5	FSM	ENSG00000054116.12	ENST00000616395.4	1336	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	215.444888544611	647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTCCTGTTTTCTTTCTGC	-36149494	False	NA	0	True	AATAAA	-28	NA	36149514	36136569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36137323_36137795_36137979_36139719_36139844_36140068_36140167_36149336
transcript_42781.known	chr14	-	496	3	FSM	ENSG00000100479.13	ENST00000553805.2	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	3.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCGGTTGATCTGACTTTT	-49687422	True	NA	50	True	NA	NA	NA	49688203	49679473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49679801_49683592_49683694_49688135
transcript_42784.known	chr14	+	4969	13	FSM	ENSG00000165516.11	ENST00000298307.10	4969	13	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_6	74.942199949917	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTTGGTGCTGAAGTATAA	49765558	True	NA	27	True	AATAAA	-19	NA	49768152	49786385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_49768622_49771593_49771674_49774560_49774679_49777838_49777955_49778177_49778260_49778410_49778495_49779594_49779676_49779747_49779807_49780212_49780323_49780702_49780776_49782369_49782458_49782541_49782595_49782829
transcript_42787.known	chr14	-	299	1	FSM	ENSG00000278771.1	ENST00000610674.1	299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTTCTCACCTTATAA	-49846893	False	7021	NA	False	NA	NA	NA	49853914	49853615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49853600_49853900
transcript_42788.known	chr14	-	300	1	FSM	ENSG00000274012.1	ENST00000490232.3	300	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCCCCTCCCTCATTAA	-49855828	True	NA	-2	True	NA	NA	NA	49862849	49862549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_49862500_49862800
transcript_42796.known	chr14	-	1772	6	FSM	ENSG00000100483.14	ENST00000395860.7	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	22.3015694514982	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	-50115051	True	NA	-7	True	AATAAA	-15	NA	50116572	50108636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_42797.known	chr14	-	1793	6	FSM	ENSG00000100483.14	ENST00000491402.5	1793	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	19.8131269616888	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGACTGTGAATTTCAGAAA	-50115079	True	NA	-3	True	AATAAA	-19	NA	50116600	50108632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_42799.known	chr14	-	795	5	FSM	ENSG00000100483.14	ENST00000395859.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	33.1087224157019	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACGAAAAATTCCTGCTTG	-50115079	True	NA	NA	False	GGGGCT	-8	NA	50116600	50109536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50114284_50114405_50115838_50115912_50116068_50116180_50116286
transcript_428.known	SIRV5	+	533	6	FSM	SIRV5A	SIRV507	533	6	0	0	0	0	multi-exon	FALSE	canonical	3	4288	junction_1	3154.16350876108	17782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCGTAAGTGGTCAAGCCAC	NA	False	NA	NA	False	NA	NA	NA	1027	3598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1925_2034_2119_2157_2270_2316_3298_3405_3483
transcript_42800.nic	chr14	-	1702	5	NIC	ENSG00000100483.14	novel	1793	6	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	31.6810274454602	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	NA	False	NA	-7	True	AATAAA	-15	NA	50116618	50108636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_50109714_50114284_50114405_50115838_50115912_50116079_50116180_50116286
transcript_42802.nnic	chr14	-	1582	4	NIC	ENSG00000100483.14	novel	1793	6	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	38.0555150040335	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGACTGTGAATTTCA	NA	False	NA	-7	True	AATAAA	-15	NA	50116618	50108636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_50109714_50115838_50115912_50116079_50116180_50116286
transcript_42805.known	chr14	-	1849	5	FSM	ENSG00000100483.14	ENST00000484763.1	1849	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_4	19.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACCTTGTGACTGTGAA	-50115037	True	NA	-12	True	AATAAA	-10	NA	50116558	50108641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50109714_50112614_50112720_50114284_50114405_50115838_50115912_50116079
transcript_42808.known	chr14	-	1958	11	FSM	ENSG00000087299.12	ENST00000421284.7	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.54986910905066	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTTAATTTTGAAGAGT	-50309652	True	NA	-107	True	AATACA	-18	NA	50312229	50245650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50246121_50247040_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_42818.known	chr14	-	6095	10	FSM	ENSG00000087299.12	ENST00000267436.9	6095	10	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	8.5764535535124	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTGTCCCTGGGAT	-50309652	True	NA	-5	True	ATTAAA	-16	NA	50312229	50242433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50247254_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_42826.nic	chr14	-	888	6	ISM	ENSG00000087299.12	ENST00000421284.7	1958	11	-1	32799	-1	3993	5prime_fragment	FALSE	canonical	3	51	junction_2	8.94427190999916	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGCTGTATTTTAAGTTA	-50309653	True	NA	NA	False	ATTAAA	-16	NA	50312230	50278449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_42828.nic	chr14	-	721	2	ISM	ENSG00000087299.12	ENST00000556393.1	548	4	-94	8927	-12	-8927	5prime_fragment	FALSE	canonical	2	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAGAAAAGAAAAGAA	-50309664	True	NA	NA	False	NA	NA	NA	50312241	50310943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_50311434_50312010
transcript_42829.known	chr14	-	1377	10	FSM	ENSG00000087299.12	ENST00000261699.8	1377	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	20.685176895784	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGAGTAAGTCCTTCTTG	-50309591	True	NA	NA	False	AATAAA	-33	NA	50312168	50237562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50237726_50265357_50265490_50267752_50267911_50269162_50269331_50278519_50278555_50283870_50284034_50294114_50294247_50302016_50302169_50302901_50303018_50312010
transcript_4283.known	chr1	+	3339	13	FSM	ENSG00000054118.15	ENST00000469141.6	3339	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	187.07039673164	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTACCGCGAGAGGCATCC	36178130	True	NA	NA	False	NA	NA	NA	36224431	36304148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36224506_36224970_36225103_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_42837.known	chr14	+	2944	6	FSM	ENSG00000125375.18	ENST00000557421.7	2944	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	64.8320908192849	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311106	True	NA	13	True	AATAAA	-25	NA	50312323	50327957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50312390_50314590_50314627_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_42845.known	chr14	+	2908	5	FSM	ENSG00000125375.18	ENST00000554438.6	2908	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	35.2526594741446	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGTGGAGATTTCATACC	50311106	True	NA	13	True	AATAAA	-25	NA	50312323	50327957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50312390_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_42879.nic	chr14	+	481	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-44	1937	-44	-123	5prime_fragment	FALSE	canonical	3	145	junction_1	33	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTTTGTTGCAGTTGACT	NA	False	NA	NA	False	AATAGA	-23	NA	50312279	50322769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_4288.known	chr1	+	4405	12	FSM	ENSG00000054118.15	ENST00000354618.10	4405	12	0	0	0	0	multi-exon	FALSE	canonical	1	127	junction_4	113.786301082554	1108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGTTCTGTTCATTGTCAT	36178141	True	NA	13	True	AATAAA	-24	NA	36224442	36305357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_36224506_36259381_36259485_36282532_36282701_36286367_36287271_36289059_36289765_36291373_36291547_36292597_36292710_36293850_36293936_36296582_36296771_36300885_36301085_36301552_36301697_36303795
transcript_42880.nic	chr14	+	604	3	ISM	ENSG00000125375.18	ENST00000555939.6	719	5	-44	1814	-44	0	5prime_fragment	FALSE	canonical	3	145	junction_1	33	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTTCCTCTCCTTCCTC	NA	False	NA	5	True	ATTAAA	-13	NA	50312279	50322892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_50312390_50321482_50321595_50322510
transcript_42882.known	chr14	+	620	5	FSM	ENSG00000125375.18	ENST00000554951.6	666	5	0	46	0	-46	multi-exon	FALSE	canonical	1	1	junction_1	79.0363840265988	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGACAGCACTGCCTTCTC	50321294	False	NA	-57	True	AAAAAG	-20	NA	50321318	50325677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50321377_50321482_50321595_50322510_50322720_50323944_50324117_50325608
transcript_42883.known	chr14	+	525	2	FSM	ENSG00000125375.18	ENST00000556962.1	525	2	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGTTGTATTGAATTTT	50322528	True	NA	NA	False	AATACA	-1	NA	50322541	50324291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50322720_50323944
transcript_42884.known	chr14	-	4354	33	FSM	ENSG00000012983.12	ENST00000013125.9	4354	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	53.3476858536291	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATATAAAGTTATTTATT	-50526973	True	NA	-52	True	AATAAA	-14	NA	50532609	50418524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50420107_50423120_50423177_50425906_50425978_50428661_50428755_50429191_50429261_50434393_50434572_50434961_50435066_50437475_50437535_50437893_50438009_50438091_50438095_50440012_50440074_50440361_50440442_50442731_50442817_50443728_50443771_50443938_50444037_50445040_50445195_50446078_50446122_50447413_50447482_50448773_50448833_50456515_50456595_50462664_50462782_50464051_50464134_50466582_50466646_50468650_50468783_50475076_50475150_50476127_50476171_50476258_50476307_50482360_50482417_50485577_50485643_50486103_50486195_50504799_50504858_50531941_50532159_50532399
transcript_42888.known	chr14	+	3844	14	FSM	ENSG00000198513.14	ENST00000556478.3	3844	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.08973343085225	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAATATACATTCGATTTA	NA	False	NA	NA	False	ATTAAA	-5	NA	50532508	50634017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50532874_50560126_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_4289.nnic	chr1	+	1875	2	NIC	ENSG00000214193.11	novel	2387	6	NA	NA	802	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGTGAAGTGCCCAG	36321388	False	NA	12	True	AATAAA	-13	NA	36321405	36329221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_36321779_36327719
transcript_42890.known	chr14	+	2504	14	FSM	ENSG00000198513.14	ENST00000358385.12	2504	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	11.8745912417971	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCTTACTGAATTTGA	50559930	True	NA	NA	False	ATTAAA	-28	NA	50560144	50633045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50629994_50630010_50632228
transcript_42892.nic	chr14	+	2168	13	ISM	ENSG00000198513.14	ENST00000553509.2	3778	14	474	1412	-39	32	3prime_fragment	FALSE	canonical	3	23	junction_3	5.33072853057316	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACACGTGTTCTGCTTGAA	NA	False	NA	10	True	TATAAA	-24	NA	50560025	50632605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_50560300_50587830_50588079_50590940_50591076_50591534_50591640_50593845_50593897_50595575_50595633_50613258_50613352_50614372_50614512_50620598_50620727_50621842_50621900_50623176_50623249_50628030_50628463_50632228
transcript_42895.known	chr14	-	3094	5	FSM	ENSG00000151748.15	ENST00000324679.5	3094	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	33.2001506020681	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGGCCATAGACAAAG	-50655101	True	NA	54	True	NA	NA	NA	50668306	50633579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50635385_50640749_50640894_50644743_50645015_50665178_50665620_50667873
transcript_4290.known	chr1	-	1006	4	FSM	ENSG00000181817.6	ENST00000476041.1	1006	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.17507630287	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGGCTAGTGTGGGTTGCT	-36393144	True	NA	NA	False	NA	NA	NA	36397887	36391237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36391605_36392357_36392488_36393765_36394154_36397766
transcript_42904.known	chr14	-	496	1	FSM	ENSG00000270062.1	ENST00000602615.1	496	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTGCCTTTATAAAAC	NA	False	NA	2	True	AATAAA	-19	NA	50724272	50723776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50723800_50724300
transcript_42908.known	chr14	-	2799	20	FSM	ENSG00000100504.17	ENST00000216392.8	2799	20	0	0	0	0	multi-exon	TRUE	canonical	3	277	junction_13	53.0823329557223	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGTGCCAAAACTTATT	-50934156	True	NA	-26	True	AATAAA	-21	NA	50944483	50905216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_42910.known	chr14	-	2696	19	FSM	ENSG00000100504.17	ENST00000544180.6	2696	19	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_18	93.2326176166599	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGAGTGCCAAAACTTAT	-50934156	True	NA	-27	True	AATAAA	-20	NA	50944483	50905217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50905557_50908270_50908338_50908820_50908956_50909894_50910103_50911729_50911872_50911977_50912037_50912155_50912304_50913028_50913131_50914700_50914816_50915335_50915500_50915824_50915972_50916641_50916735_50916961_50917106_50920540_50920624_50920955_50921068_50923968_50924101_50931672_50931777_50935106_50935186_50944160
transcript_42917.nnic	chr14	+	1269	6	NNC	ENSG00000131969.15	novel	850	6	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	3	26	junction_1	106.440593760088	247	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50892993	True	NA	21	True	AATAAA	-21	NA	50893504	50904970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_50893759_50895620_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42920.nnic	chr14	+	1428	6	NNC	ENSG00000131969.15	novel	850	6	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	111.092033917829	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50893020	False	NA	21	True	AATAAA	-21	NA	50893531	50904970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_50893759_50895434_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42922.known	chr14	+	850	6	FSM	ENSG00000131969.15	ENST00000554566.5	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	100.260460800856	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAACATGCTGAAACCTCA	50893070	False	NA	NA	False	NA	NA	NA	50893581	50904571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_50893759_50895563_50895723_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42923.nnic	chr14	+	952	5	NNC	ENSG00000131969.15	novel	588	4	NA	NA	-77	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_1	122.477548963065	210	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTATGCCATTTTGT	50892993	True	NA	21	True	AATAAA	-21	NA	50893504	50904970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_50893544_50901828_50901912_50903388_50903468_50904073_50904193_50904338
transcript_42932.known	chr14	-	1459	5	FSM	ENSG00000100504.17	ENST00000530336.2	1459	5	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	15.6044865343272	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTACACTGTGGGTCCCA	-50934143	True	NA	14	True	AATAAA	-43	NA	50944470	50923236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_50924101_50931672_50931777_50935106_50935186_50937735_50937838_50944160
transcript_4294.known	chr1	-	860	2	FSM	ENSG00000181817.6	ENST00000315732.3	860	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	2088	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCTCTAAGTGTCTCCA	-36393165	True	NA	-26	True	ATTAAA	-15	NA	36397908	36393435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36394154_36397766
transcript_42943.known	chr14	+	4025	8	FSM	ENSG00000139921.13	ENST00000457354.7	4025	8	0	0	0	0	multi-exon	FALSE	canonical	3	1038	junction_7	80.7455059721213	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGCAAAGTCAGATTATATA	51227117	True	NA	36	True	AATAAA	-30	NA	51240246	51257655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51240445_51243855_51243972_51245312_51245359_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_42947.known	chr14	+	2117	8	FSM	ENSG00000139921.13	ENST00000556683.1	2117	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	405.283674902971	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATATTATCCTGTGTTC	51227120	True	NA	21	True	TTTAAA	-34	NA	51240249	51255654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51240445_51243855_51243972_51245312_51245455_51247091_51247221_51249325_51249372_51249467_51249570_51249692_51249766_51254340
transcript_42954.known	chr14	+	4800	14	FSM	ENSG00000139926.16	ENST00000344768.10	4800	14	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	13.3797515477415	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCCTTTTTGATTATTAGA	51650313	True	NA	21	True	AATAAA	-21	NA	51651909	51730727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51651997_51689690_51689936_51698141_51698233_51701055_51701160_51702511_51702589_51704748_51704936_51708077_51708234_51711530_51711597_51712482_51712552_51715324_51715500_51720054_51720391_51721948_51722081_51725778_51725871_51727744
transcript_42956.known	chr14	+	908	5	FSM	ENSG00000186469.9	ENST00000555472.5	908	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.4329277266283	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATGTGTGACCTTCTTGG	51859002	True	NA	12	True	ATTAAA	-23	NA	51860641	51967040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51877616_51877658_51913008_51913129_51950649_51950766_51966558
transcript_42959.known	chr14	+	2125	4	FSM	ENSG00000186469.9	ENST00000556766.6	3573	4	34	1414	4	1220	multi-exon	FALSE	canonical	3	75	junction_2	5.71547606649408	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGGAAGAGAAAAAGTT	51859006	True	NA	NA	False	AAAAAG	-5	NA	51860645	51968381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51877616_51877658_51950649_51950766_51966558
transcript_4296.known	chr1	-	1381	10	FSM	ENSG00000116885.18	ENST00000433045.6	1381	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.83306877706964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTCAGTGAAATATATT	-36440816	False	NA	-36	True	NA	NA	NA	36440975	36417942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36440818
transcript_42961.known	chr14	+	3729	3	FSM	ENSG00000186469.9	ENST00000335281.8	3729	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	33.5	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATATGCAGTCAATTT	NA	False	NA	7	True	AATAAA	-17	NA	51860413	51969794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51860791_51950649_51950766_51966558
transcript_42963.known	chr14	+	3424	3	FSM	ENSG00000186469.9	ENST00000556752.2	3424	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	6.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCAGTCAATTTCATTGT	NA	False	NA	13	True	AATAAA	-23	NA	51877591	51969800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51877658_51950649_51950766_51966558
transcript_42964.known	chr14	-	479	2	FSM	ENSG00000259007.1	ENST00000553603.1	479	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAATATGAAGCAGAAACA	NA	False	NA	NA	False	NA	NA	NA	51969800	51967002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_51967404_51969722
transcript_42966.known	chr14	+	851	8	FSM	ENSG00000087302.9	ENST00000556760.5	851	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	817.639759007721	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTATTGCTTTTTTCTT	51968992	True	NA	2	True	NA	NA	NA	51989614	52004653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004239_52004243_52004361
transcript_42967.known	chr14	+	7007	8	FSM	ENSG00000087302.9	ENST00000261700.8	7007	8	0	0	0	0	multi-exon	FALSE	canonical	3	2149	junction_3	98.0840955298991	6768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGACCTTGTCTTTTCCTAG	51968923	True	NA	NA	False	AATAAA	-21	NA	51989545	52010694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_51989701_51991316_51991442_51993722_51993823_51998493_51998581_51999707_51999797_52001797_52001867_52004193_52004243_52004361
transcript_42968.known	chr14	+	562	2	FSM	ENSG00000087302.9	ENST00000553479.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	2419	junction_1	0	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATTTTTATTATGTACTG	52003961	False	NA	41	True	AATAAA	-13	NA	52004011	52004692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52004243_52004361
transcript_42969.known	chr14	+	2957	2	FSM	ENSG00000168229.4	ENST00000306051.3	2957	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAGGAAATTACTT	52267683	True	NA	NA	False	AATAAA	-16	NA	52267697	52276724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52268661_52274730
transcript_4297.known	chr1	-	1455	10	FSM	ENSG00000116885.18	ENST00000235532.9	1455	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.44623609317129	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCATTTTATTCTTA	-36450292	True	NA	1	True	AATATA	-20	NA	36450451	36417905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36418256_36418990_36419055_36420475_36420616_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_42970.known	chr14	+	2458	2	FSM	ENSG00000125384.7	ENST00000245457.6	2458	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAAAATGGAGTAGTATT	52314187	True	NA	NA	False	AATAAA	-15	NA	52314311	52328598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52315392_52327220
transcript_42972.known	chr14	-	4557	21	FSM	ENSG00000087301.9	ENST00000281741.9	4557	21	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_9	8.99666604915399	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCACAAGCCTCCTTTAG	-52550259	True	NA	-5	True	AATAAA	-20	NA	52552505	52430595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52432588_52439203_52439395_52440563_52440725_52455323_52455463_52457089_52457175_52470036_52470174_52470511_52470681_52482229_52482290_52482821_52482966_52488362_52488487_52490390_52490452_52490838_52491006_52511239_52511391_52514879_52514971_52519171_52519294_52536718_52536794_52537598_52537673_52542370_52542454_52543397_52543631_52544263_52544372_52552315
transcript_42973.nic	chr14	-	319	2	ISM	ENSG00000087301.9	ENST00000281741.9	4557	21	-53	113700	-36	-55933	5prime_fragment	FALSE	canonical	3	86	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTAACAGCAGATACAGAG	-52550312	True	NA	NA	False	AATAAA	-2	NA	52552558	52544295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_52544372_52552315
transcript_42974.known	chr14	-	5139	16	FSM	ENSG00000197930.13	ENST00000395686.8	5139	16	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_4	18.3782480122562	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGTGTGGTTTTTGGT	-52695380	False	NA	0	True	AATAAA	-18	NA	52695558	52639914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52643631_52646153_52646288_52646374_52646462_52652238_52652309_52653068_52653316_52657916_52658010_52658123_52658151_52661292_52661305_52663800_52663848_52666374_52666496_52671629_52671704_52671794_52671872_52678433_52678473_52682324_52682409_52683787_52683908_52695367
transcript_42987.known	chr14	+	2163	14	FSM	ENSG00000100519.12	ENST00000445930.7	2163	14	0	0	0	0	multi-exon	FALSE	canonical	3	955	junction_4	72.3017182474833	1877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGGAATCATCATTGG	52693083	True	NA	NA	False	AATAAA	-16	NA	52707199	52728590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52707305_52708308_52708389_52708482_52708523_52708763_52708817_52711100_52711169_52711409_52711525_52713880_52713969_52718080_52718143_52718228_52718353_52718976_52719039_52720860_52720982_52721109_52721191_52723964_52724037_52727498
transcript_42988.known	chr14	+	2939	3	FSM	ENSG00000100519.12	ENST00000557557.1	2939	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	562	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATATATATTCTTGTCTT	52721483	False	NA	8	True	AATAAA	-22	NA	52721499	52727990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52723875_52723964_52724037_52727498
transcript_42989.known	chr14	+	4554	12	FSM	ENSG00000198252.12	ENST00000442123.6	4554	12	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	119.573691791276	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTGGTGGTTGTATTA	52722123	True	NA	4	True	ATTAAA	-11	NA	52730179	52774941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52730211_52730458_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_42994.known	chr14	+	4864	11	FSM	ENSG00000198252.12	ENST00000354586.5	4864	11	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_5	32.3061913570758	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAAAAGCTCATTCATA	52722109	True	NA	31	True	ATTAAA	-27	NA	52730165	52774989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52730532_52744851_52744885_52746425_52746480_52750682_52750781_52756550_52756612_52757318_52757356_52757742_52757783_52757873_52757925_52759681_52759755_52768839_52768934_52771032
transcript_4300.known	chr1	-	989	9	FSM	ENSG00000116885.18	ENST00000445843.7	989	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.60807714779169	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGCTGCTAGTTTTCTAC	-36450239	False	NA	NA	False	NA	NA	NA	36450279	36418059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36418256_36418990_36419055_36422149_36422220_36422767_36422897_36423362_36423467_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_43006.known	chr14	-	785	7	FSM	ENSG00000100522.10	ENST00000557604.1	785	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	166.880862360614	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATAAAAAGTTTGGATATA	-52791285	False	NA	NA	False	NA	NA	NA	52791668	52778374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52787832_52787872_52791427
transcript_43013.known	chr14	+	898	2	FSM	ENSG00000259049.1	ENST00000555969.1	898	2	0	0	0	0	multi-exon	TRUE	canonical	1	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATTTCTTCTACTTCAAAA	52775223	False	NA	NA	False	AGTAAA	-41	NA	52775236	52777740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52775947_52777552
transcript_43014.known	chr14	-	3867	6	FSM	ENSG00000100522.10	ENST00000216410.8	3867	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_1	23.0651251893416	581	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCCTGGACTACAGAC	-52786092	True	NA	-23	True	AATAAA	-18	NA	52791607	52775192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52778459_52780678_52780741_52781783_52781912_52783422_52783486_52784496_52784665_52791427
transcript_43015.known	chr14	-	234	2	FSM	ENSG00000100522.10	ENST00000553987.1	234	2	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGACTTTGAGTTTCCA	-52783102	False	NA	1	True	AATAAA	-22	NA	52783485	52781740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52781912_52783422
transcript_43016.known	chr14	-	3247	16	FSM	ENSG00000073712.15	ENST00000343279.8	3247	16	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_13	34.321745617352	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTATTTTTGTACTTG	-52950960	False	NA	-8	True	AATAAA	-17	NA	52950992	52857274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52861013_52861035_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_43017.known	chr14	-	3286	15	FSM	ENSG00000073712.15	ENST00000341590.8	3286	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	91.0782630488746	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTATTTTTGTACTTGTT	-52946345	True	NA	-6	True	AATAAA	-19	NA	52951050	52857272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52858551_52859572_52859715_52860340_52860466_52864400_52864623_52864746_52864854_52872798_52872924_52874176_52874227_52875222_52875358_52878581_52878690_52881035_52881139_52881243_52881470_52893292_52893428_52919122_52919357_52950411_52950578_52950920
transcript_43018.nic	chr14	-	636	4	ISM	ENSG00000073712.15	ENST00000399304.7	2082	15	-69	33871	-37	0	5prime_fragment	FALSE	canonical	3	317	junction_1	31.0268700752536	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGATGACCAGTCTGAA	-52946382	True	NA	NA	False	AAAAAG	-5	NA	52951087	52893358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_52893428_52919122_52919357_52950411_52950578_52950920
transcript_43019.known	chr14	-	587	4	FSM	ENSG00000073712.15	ENST00000554712.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	170.200535317085	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGATGACCAGTCTGAA	-52952403	True	NA	NA	False	AAAAAG	-5	NA	52952435	52893358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_52893428_52919122_52919357_52950411_52950578_52952317
transcript_43020.known	chr14	+	1433	1	FSM	ENSG00000288045.1	ENST00000657782.1	1433	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCACGGAAGTTTTTTCT	52951300	True	NA	NA	False	AATACA	-31	NA	52951431	52952864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_52951400_52952900
transcript_43021.known	chr14	-	5603	12	FSM	ENSG00000100523.16	ENST00000357758.3	5603	12	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	16.4944268073334	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGTGTACATGCTATGA	-53151220	True	NA	-1	True	ATTAAA	-13	NA	53153282	53043967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53046950_53054437_53054630_53055659_53055913_53058476_53058627_53061125_53061202_53062942_53063206_53072596_53072704_53073740_53073848_53091784_53091933_53093315_53093445_53103682_53103857_53152260
transcript_43022.known	chr14	+	2598	5	FSM	ENSG00000237356.7	ENST00000663444.1	2598	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.37867541108654	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACGAACTGTGCCCATATA	53217411	True	NA	NA	False	NA	NA	NA	53217654	53720974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_53218056_53318030_53318139_53369451_53369502_53687198_53687375_53719111
transcript_43024.nic	chr14	-	1740	4	NIC	ENSG00000125378.16	novel	1708	4	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_2	17.6131264181639	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956344	True	NA	3	True	AATAAA	-25	NA	53956896	53949735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_53950889_53951852_53952177_53953275_53953401_53956758
transcript_43027.known	chr14	-	1931	4	FSM	ENSG00000125378.16	ENST00000245451.9	1931	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	7.03957069398096	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956273	True	NA	3	True	AATAAA	-25	NA	53956825	53949735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956549
transcript_43028.known	chr14	-	1708	4	FSM	ENSG00000125378.16	ENST00000559087.5	1708	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	14.1656862405839	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATTTTTTTTTTCTCC	-53956259	True	NA	3	True	AATAAA	-25	NA	53956811	53949735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53950889_53951852_53952230_53953275_53953401_53956758
transcript_43033.known	chr14	-	605	2	FSM	ENSG00000125378.16	ENST00000558489.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTGGCTTTTATCTT	-53956096	False	NA	-4	True	AATAAA	-18	NA	53956648	53955465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53955972_53956549
transcript_43034.known	chr14	-	1705	3	FSM	ENSG00000125378.16	ENST00000558984.1	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	5.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATCATGATTTTTTTTT	-53952903	False	552	-2	True	AATAAA	-20	NA	53953455	53949740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_53950889_53951852_53952230_53953275
transcript_4304.known	chr1	-	767	5	FSM	ENSG00000116885.18	ENST00000354267.3	767	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.43705983732471	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTATTTAGTGCCTT	-36450284	True	NA	NA	False	AATAAA	-21	NA	36450443	36428298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36428476_36431801_36431883_36432421_36432590_36438755_36438911_36450257
transcript_43041.nic	chr14	+	844	7	NIC	ENSG00000100526.21	novel	841	8	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	3	147	junction_1	420.430500267946	1169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	NA	False	NA	16	True	NA	NA	NA	54396920	54420218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_43048.known	chr14	+	689	6	FSM	ENSG00000100526.21	ENST00000555837.5	689	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	455.286898559579	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGAGGTGGGCGGTGCT	NA	False	NA	NA	False	AATACA	-11	NA	54396848	54417951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847
transcript_43052.known	chr14	+	874	9	NNC	ENSG00000100526.21	novel	938	9	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	543.122626577093	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACTCGTTGTGTCTCTTT	54386009	True	NA	12	True	NA	NA	NA	54396954	54420214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411686_54412834_54412841_54415898_54415931_54417847_54417952_54419991
transcript_43053.known	chr14	+	938	9	FSM	ENSG00000100526.21	ENST00000556102.6	938	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	528.558402047494	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386057	True	NA	16	True	NA	NA	NA	54397002	54420218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213_54418307_54419991
transcript_43054.known	chr14	+	727	7	FSM	ENSG00000100526.21	ENST00000442975.6	727	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	447.846699961791	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAAACTCGTTGTGTCTCT	54386049	True	NA	10	True	NA	NA	NA	54396994	54420212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399913_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_43055.known	chr14	+	841	8	FSM	ENSG00000100526.21	ENST00000335183.11	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	1166	junction_1	68.4621152498942	4739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTTGTGTCTCTTTCATT	54386061	True	NA	16	True	NA	NA	NA	54397006	54420218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54397078_54399893_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54419991
transcript_43056.known	chr14	+	712	7	FSM	ENSG00000100526.21	ENST00000556305.1	712	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_6	459.999154588595	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGCTAATTATCCTTT	54388980	False	NA	NA	False	AATAAA	-34	NA	54399925	54418414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54399977_54401523_54401580_54408744_54408790_54411483_54411707_54415898_54415931_54417847_54417952_54418213
transcript_43057.known	chr14	-	787	6	FSM	ENSG00000100528.12	ENST00000554683.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	368.336042222316	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTAATATAAAATGATTA	-54433938	True	NA	NA	False	GATAAA	-23	NA	54441344	54427594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54436669_54436786_54441246
transcript_43058.known	chr14	-	785	4	FSM	ENSG00000100528.12	ENST00000553660.5	785	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	329.757823595168	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATTATAAATTAGCTGTAG	-54433951	True	NA	NA	False	NA	NA	NA	54441357	54427424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54441246
transcript_43060.known	chr14	-	4735	5	FSM	ENSG00000100528.12	ENST00000216416.9	4735	5	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_1	66.7359535782624	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTGTAGTTTATGCAT	-54433968	True	NA	-2	True	AATAAA	-17	NA	54441374	54423560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54430260_54430405_54432107_54432221_54436368_54436438_54441246
transcript_43061.known	chr14	-	1233	4	FSM	ENSG00000100528.12	ENST00000395573.8	1233	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	381.210644598961	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGACTCACTTTCAGTGCAT	-54433985	True	NA	-10	True	AATAAA	-12	NA	54441391	54426935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54427842_54432107_54432221_54436368_54436438_54441246
transcript_43065.known	chr14	-	4125	7	FSM	ENSG00000197045.13	ENST00000616146.4	4125	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	330.653771589962	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGACTTCCAGCTTTTCT	-54480349	True	NA	-26	True	AATAAA	-12	NA	54489026	54474490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54478160_54479785_54479860_54480873_54480956_54481407_54481459_54482152_54482203_54483670_54483768_54488924
transcript_43069.known	chr14	-	639	6	FSM	ENSG00000197045.13	ENST00000628554.2	639	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	441.014013382795	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGGACTTTTTGCACTC	-54480280	True	NA	NA	False	NA	NA	NA	54488957	54477857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54478160_54479785_54479860_54480873_54480957_54481408_54481459_54483670_54483768_54488924
transcript_43088.known	chr14	+	1962	6	FSM	ENSG00000100532.13	ENST00000216420.12	1962	6	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_3	20.4978047605103	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTTTATTCATCCATTGT	54508490	True	NA	16	True	AATAAA	-25	NA	54509905	54539292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_43090.nic	chr14	+	1397	6	NIC	ENSG00000100532.13	novel	1962	6	NA	NA	-74	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	92.0860467171873	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAAGAGTTTGGCCTTT	NA	False	NA	21	True	CATAAA	-23	NA	54509737	54538614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_54510064_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538117
transcript_43094.known	chr14	+	1937	6	FSM	ENSG00000100532.13	ENST00000679442.1	1937	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	72.6570024154589	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTAGCAGAATGTGATCT	54508489	True	NA	NA	False	ATTAAA	-29	NA	54509904	54539087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530406_54530902_54531051_54537721_54537830_54538062
transcript_43096.known	chr14	+	901	6	FSM	ENSG00000100532.13	ENST00000557512.5	901	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.2725541124031	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGACACACATGCCTGT	54508710	False	NA	NA	False	NA	NA	NA	54510125	54538247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510268_54522453_54522594_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_43100.known	chr14	+	622	5	FSM	ENSG00000100532.13	ENST00000557755.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	105.650366776458	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAACAATTCCTCTTCAGA	54508496	True	NA	NA	False	NA	NA	NA	54509911	54538098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54530048_54530227_54530902_54531051_54537721_54537830_54538062
transcript_43108.known	chr14	+	719	4	FSM	ENSG00000100532.13	ENST00000554791.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	114.499878699596	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTATTTTCAGCAGTGCCC	54509797	False	NA	NA	False	NA	NA	NA	54509811	54538281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54537721_54537830_54538062
transcript_43111.known	chr14	+	1827	6	FSM	ENSG00000100532.13	ENST00000556216.5	1827	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	83.2163445484119	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAAGAGTTTGGCCTTTTA	54508486	True	NA	23	True	CATAAA	-25	NA	54509901	54538616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_54510064_54522453_54522594_54530048_54530764_54530902_54531051_54537721_54537830_54538062
transcript_43113.known	chr14	-	6019	26	FSM	ENSG00000198554.12	ENST00000360586.8	6019	26	0	0	0	0	multi-exon	FALSE	canonical	1	126	junction_11	55.1433912631423	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAATGCCATAATTACTC	-55020123	True	NA	NA	False	AATAAA	-18	NA	55027099	54938948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55026710_55026804_55027027
transcript_43116.known	chr14	-	3722	25	FSM	ENSG00000198554.12	ENST00000420358.2	3722	25	0	0	0	0	multi-exon	FALSE	canonical	1	58	junction_24	77.8272660019182	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATACCTTCTAGGGGTTTGGT	-55020129	True	NA	-9	True	ATTAAA	-29	NA	55027105	54941158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_54941691_54944331_54944471_54955560_54955695_54957033_54957205_54957591_54957636_54962497_54962552_54962737_54962854_54962951_54963173_54966474_54966607_54967279_54967395_54981539_54981697_54984722_54984861_54987145_54987388_54989027_54989213_54991212_54991401_54995602_54995814_55000502_55000645_55000885_55000993_55002092_55002186_55007279_55007376_55008315_55008367_55008607_55008720_55010308_55010461_55013484_55013597_55027027
transcript_43122.nnic	chr14	-	351	3	NNC	ENSG00000198554.12	novel	6019	26	NA	NA	0	-12586	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	139	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGATTTTCCTGATATA	-55020123	True	NA	NA	False	AATAAA	-22	NA	55027099	55020901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_55021088_55026710_55026804_55027027
transcript_43125.nnic	chr14	+	660	3	NNC	ENSG00000180008.9	novel	6903	3	NA	NA	-112	4041	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	32.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTTCTAATGCCTGCC	55027051	False	NA	91	True	ATTAAA	-27	NA	55027117	55036035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55027472_55031862_55031992_55035858
transcript_43126.known	chr14	+	6903	3	FSM	ENSG00000180008.9	ENST00000555846.2	6903	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	1.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGTTTTATTTTAA	55024201	True	NA	15	True	ATTAAA	-22	NA	55027235	55049489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55027472_55031862_55031992_55042951
transcript_43138.known	chr14	+	6779	2	FSM	ENSG00000180008.9	ENST00000395472.2	6779	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTTTGTGTTTTATTTTA	55024195	True	NA	14	True	ATTAAA	-21	NA	55027229	55049488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55027472_55042951
transcript_43144.nnic	chr14	+	649	2	NNC	ENSG00000168175.15	novel	565	2	NA	NA	-7	-2281	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAACAGTCCTCTGTGTCT	55038201	True	NA	NA	False	AATAAA	-21	NA	55051639	55058501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55051804_55058016
transcript_43145.nnic	chr14	+	982	2	NNC	ENSG00000168175.15	novel	565	2	NA	NA	0	-5758	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAAAGCCTTTCTTGAGTA	55038208	True	NA	NA	False	AAAAAG	-7	NA	55051646	55055024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55051804_55054199
transcript_43146.known	chr14	+	2836	5	FSM	ENSG00000168175.15	ENST00000622254.1	2836	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	411.910487848999	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACCTGGAAACTTTTTTTA	55038244	True	NA	13	True	GATAAA	-21	NA	55051682	55069502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55051804_55061679_55061702_55062617_55063326_55064615_55066207_55069108
transcript_43151.known	chr14	+	958	6	FSM	ENSG00000131981.16	ENST00000254301.14	958	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	11.0163514831363	510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCATTTAATTGGAGTG	55128418	True	NA	17	True	AATAAA	-26	NA	55129251	55145423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55129301_55137369_55137392_55138044_55138369_55140274_55140364_55142583_55142750_55145115
transcript_43155.known	chr14	-	2954	20	FSM	ENSG00000126787.13	ENST00000395425.6	2954	20	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	317.562409073413	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAGCTTAAGGCTAAGTA	-55171041	True	NA	14	True	AATAAA	-36	NA	55191544	55148111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55148474_55148593_55148685_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_43165.known	chr14	-	2881	19	FSM	ENSG00000126787.13	ENST00000247191.7	2881	19	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_6	125.45162857098	777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCCTCTCTTGTTTAAA	-55171082	True	NA	-9	True	AATAAA	-13	NA	55191585	55148134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55148474_55150798_55150849_55151694_55151942_55152589_55152648_55154616_55154807_55158521_55158742_55162970_55163076_55169398_55169560_55170701_55170788_55175345_55175473_55175893_55176019_55177061_55177337_55179628_55179700_55180655_55180779_55181212_55181298_55182369_55182433_55183559_55183754_55188941_55189181_55191462
transcript_43181.known	chr14	-	641	4	FSM	ENSG00000126787.13	ENST00000554067.1	641	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	522.138125616414	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTCTTTTATCAAACCAGA	-55171105	True	NA	NA	False	TTTAAA	-30	NA	55191608	55183605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55183754_55188941_55189181_55191068_55191177_55191462
transcript_43187.known	chr14	-	4715	10	FSM	ENSG00000126775.9	ENST00000247178.6	4715	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	8.2192186706253	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCATGTGTATGTCT	-55408145	True	NA	0	True	AATAAA	-14	NA	55411830	55366390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55369926_55377818_55377905_55377983_55378075_55380572_55380691_55381961_55382192_55385858_55386097_55390910_55390993_55395939_55395983_55397371_55397435_55411601
transcript_43190.known	chr14	+	3348	2	FSM	ENSG00000178974.11	ENST00000313833.5	3348	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAAGTTTTGCAAAGATTT	55269673	True	NA	11	True	AATAAA	-21	NA	55271420	55353611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55271538_55350380
transcript_43191.known	chr14	-	2037	7	FSM	ENSG00000182521.5	ENST00000247219.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.897527467855751	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTGAACTGTACAAATGT	NA	False	NA	NA	False	NA	NA	NA	55440616	55413540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55414456_55424158_55424254_55428806_55428975_55433629_55433722_55435846_55435935_55436560_55437019_55440395
transcript_43194.nic	chr14	+	588	3	ISM	ENSG00000126777.18	ENST00000395308.5	4134	43	-56	68323	14	122	5prime_fragment	FALSE	canonical	3	113	junction_2	10	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAAAAGAAACAAAAGC	55566361	True	NA	NA	False	AAGAAA	-4	NA	55580267	55612395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_55580355_55601756_55601881_55612018
transcript_43195.known	chr14	+	4728	44	FSM	ENSG00000126777.18	ENST00000395314.8	4728	44	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_39	181.007115846367	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGACTTGTTCTAATTTTT	55566300	True	NA	19	True	AATAAA	-20	NA	55580206	55684579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_55580355_55612018_55612572_55616516_55616655_55617963_55618135_55619181_55619313_55627911_55628029_55629956_55630098_55633234_55633342_55634525_55634659_55636448_55636537_55637197_55637365_55637778_55637848_55639184_55639223_55639912_55640004_55640373_55640443_55640932_55640971_55641126_55641209_55641691_55641761_55646972_55647008_55648024_55648116_55648801_55648871_55649775_55649814_55650327_55650419_55650568_55650638_55651889_55651928_55652849_55652941_55653016_55653086_55653558_55653597_55656041_55656133_55658545_55658615_55659665_55659704_55661521_55661613_55663954_55664042_55667240_55667331_55670728_55670810_55671565_55671656_55671784_55671878_55672629_55672702_55672928_55673013_55673171_55673256_55675834_55675919_55678351_55678445_55679564_55679686_55684098
transcript_43199.nnic	chr14	-	722	4	NNC	ENSG00000186615.12	novel	3095	4	NA	NA	-7	-2711	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.1455023315337	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGTGCCCTGAATTCTT	-55579561	True	NA	NA	False	AATAAA	-16	NA	55580150	55499496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_55499797_55561088_55561164_55578605_55578738_55579935
transcript_43200.known	chr14	-	2185	4	FSM	ENSG00000186615.12	ENST00000412224.6	2185	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	10.1434160364686	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATACAAAAATTA	-55579521	True	NA	NA	False	NA	NA	NA	55580110	55557971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55559775_55561088_55561164_55578605_55578738_55579935
transcript_43206.known	chr14	-	1465	3	FSM	ENSG00000186615.12	ENST00000335142.6	1534	3	69	0	22	0	multi-exon	FALSE	canonical	3	21	junction_1	2	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAACTATTAAAATGTGAAT	-55579485	True	NA	-36	True	NA	NA	NA	55580074	55576185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55577380_55578605_55578738_55579935
transcript_43207.known	chr14	-	415	3	FSM	ENSG00000186615.12	ENST00000663686.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	7.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGCCACTCATTGCGTG	-55580848	True	NA	-10	True	ATTAAA	-14	NA	55580888	55577139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_55577380_55578605_55578738_55580845
transcript_43210.nnic	chr14	+	541	4	NNC	ENSG00000259868.3	novel	955	2	NA	NA	1691	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	5.43650214343336	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCAGTCTAAGGTGTTT	55958162	False	NA	NA	False	AATAAA	-18	NA	55958173	55962967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55958359_55961980_55962088_55962171_55962278_55962824
transcript_43212.nnic	chr14	+	438	3	NNC	ENSG00000259868.3	novel	955	2	NA	NA	1691	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_2	2	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTAAGGTGTTTTGT	55958162	False	NA	NA	False	AATAAA	-21	NA	55958173	55962970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_55958359_55961980_55962088_55962824
transcript_43216.known	chr14	-	2956	5	FSM	ENSG00000165588.19	ENST00000339475.10	2956	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	120.553670620185	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGGCTATTTC	-56810424	False	NA	-1	True	AATGAA	-19	NA	56810448	56799904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804340_56805359_56805576_56810158_56810223_56810375
transcript_43220.known	chr14	-	908	3	FSM	ENSG00000165588.19	ENST00000554845.2	1086	3	0	178	0	-103	multi-exon	FALSE	canonical	3	35	junction_2	109.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCAGTCCCCAGCTTCTC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804364_56805359
transcript_43222.known	chr14	-	835	2	FSM	ENSG00000165588.19	ENST00000554788.5	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGCTTAACTTCAATGC	-56801014	True	NA	NA	False	NA	NA	NA	56805648	56801809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56805359
transcript_43223.known	chr14	-	2109	3	FSM	ENSG00000165588.19	ENST00000408990.8	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	12	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGGTCCAGTTTAATTT	-56801033	True	NA	-1	True	ATTAAA	-16	NA	56805667	56800706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_56802356_56804187_56804340_56805359
transcript_43226.known	chr14	-	624	2	FSM	ENSG00000258592.1	ENST00000551408.2	624	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACACCCTTGGGAAGGATA	-57112429	True	NA	NA	False	NA	NA	NA	57112660	57067007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57067166_57112194
transcript_43228.known	chr14	-	10486	18	FSM	ENSG00000070367.16	ENST00000621441.5	10486	18	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_13	42.9213491695318	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATACAATTGTTGTTTTTG	-57257617	True	NA	-6	True	AATAAA	-18	NA	57268905	57200506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57208798_57209566_57209783_57209952_57210062_57217981_57218069_57219321_57219443_57222307_57222417_57229733_57229882_57231505_57231716_57232666_57232750_57233742_57233884_57233987_57234033_57235710_57235821_57237337_57237367_57239594_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_43235.known	chr14	-	772	5	FSM	ENSG00000070367.16	ENST00000554598.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_3	40.0562105047395	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTATGATTTTCTTTGCC	-57257535	True	NA	NA	False	AATAAA	-13	NA	57268823	57239527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_57239660_57244164_57244360_57246710_57246859_57247617_57247713_57268621
transcript_43236.known	chr14	+	1815	9	FSM	ENSG00000053770.12	ENST00000431972.6	1815	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	106.387190840815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAATCATAATCTTAT	57265592	True	NA	NA	False	TTTAAA	-26	NA	57269055	57288925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269389_57273708_57273751_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_4324.known	chr1	-	953	8	FSM	ENSG00000116898.12	ENST00000373116.6	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	57.7057985273011	5089	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAGAAGGAATTTATTCT	-36443054	True	NA	25	True	GGGGCT	-15	NA	36464384	36455717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_36455926_36456186_36456379_36457922_36457982_36460691_36460777_36461263_36461313_36462087_36462164_36463805_36463851_36464145
transcript_43242.known	chr14	+	11675	8	FSM	ENSG00000053770.12	ENST00000261558.8	11675	8	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	21.2458879574858	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGTGTAAGTGTTTTATA	57265507	True	NA	5	True	AATAAA	-17	NA	57268970	57298742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269389_57274243_57274890_57280194_57280423_57282088_57282229_57282933_57283020_57283111_57283231_57286222_57286320_57288801
transcript_4325.nnic	chr1	-	848	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-535	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGATTAGTGAGAATCTT	NA	False	NA	NA	False	AATAAA	-21	NA	36770260	36768121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_36768612_36769902
transcript_43255.known	chr14	+	1691	2	FSM	ENSG00000053770.12	ENST00000554931.1	1691	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAGGAGAGAGACAGGC	57265460	True	NA	41	True	NA	NA	NA	57268923	57275469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269389_57274243
transcript_43257.known	chr14	+	610	2	FSM	ENSG00000053770.12	ENST00000556995.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCATCTGTGACTCAGC	57265476	True	NA	NA	False	NA	NA	NA	57268939	57274723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57269070_57274243
transcript_43259.nnic	chr14	-	591	3	NNC	ENSG00000286355.1	novel	2000	2	NA	NA	606	43593	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTCATCAGAATTCCT	-57343947	True	NA	NA	False	AATAAA	-19	NA	57344118	57291609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_57291920_57336315_57336454_57343975
transcript_4326.nnic	chr1	-	751	2	NNC	ENSG00000284720.1	novel	1521	2	NA	NA	-535	-97	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGATTTTCCCCTTTT	NA	False	NA	NA	False	AATAAA	-25	NA	36770260	36768218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_36768612_36769902
transcript_43261.known	chr14	+	1294	4	FSM	ENSG00000139977.14	ENST00000555166.5	1294	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	80.2426874480715	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTCAAAAGAGATAAGAAAAG	57386209	True	NA	NA	False	NA	NA	NA	57390543	57410330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57390706_57396751_57396876_57399827_57399884_57409378
transcript_43263.known	chr14	+	7600	5	FSM	ENSG00000139977.14	ENST00000556492.6	7600	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	11.8638105177047	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGACTTAACTAGGTAAA	57386251	True	NA	13	True	AATAAA	-24	NA	57390585	57415906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_57390706_57390956_57391729_57396751_57396876_57399827_57399884_57409378
transcript_43268.nnic	chr14	-	1699	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29070	-2723	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	16.9901932498329	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGCTGTCACTGTGGAGT	NA	False	NA	-17	True	AATAAA	-14	NA	58033094	58003483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_4327.known	chr1	-	1395	3	FSM	ENSG00000233621.3	ENST00000424989.2	1419	3	21	3	1	0	multi-exon	FALSE	canonical	2	4	junction_2	1	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTTATTTTTCTCTGCTA	-37474330	True	NA	-5	True	AATAAA	-17	NA	37474411	37454878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37455913_37456366_37456460_37474143
transcript_43271.nnic	chr14	-	1129	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29070	-3293	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	16.9901932498329	115	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACGTTTGCTGTCTTAAA	NA	False	NA	-3	True	ATTAAA	-18	NA	58033094	58004053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_43274.nnic	chr14	-	522	4	NNC	ENSG00000139971.15	novel	6495	8	NA	NA	-29070	-3900	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	16.9901932498329	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAACCTGCCACATTGCT	NA	False	NA	NA	False	NA	NA	NA	58033094	58004660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_58004805_58005047_58005183_58012118_58012151_58032883
transcript_43281.nnic	chr14	-	2282	3	NIC	ENSG00000257621.9	novel	2475	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	59	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTGGGATTTATTG	-58296049	True	NA	-6	True	ATTAAA	-19	NA	58298134	58265364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_58267394_58291634_58291708_58297954
transcript_43282.nnic	chr14	-	763	3	NIC	ENSG00000257621.9	novel	903	4	NA	NA	-117	-16	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	59	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATTTATACGCCAAAAAAGA	-58298219	False	NA	NA	False	AAAAAG	-12	NA	58298251	58267000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_58267394_58291634_58291708_58297954
transcript_43284.known	chr14	+	1544	14	FSM	ENSG00000131966.14	ENST00000554402.6	1544	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_11	146.161416807972	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAATAAAGTATAGTAAAG	58194827	False	NA	-9	True	NA	NA	NA	58200218	58234768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58231079_58231154_58232065_58232268_58234369
transcript_43290.known	chr14	+	2408	13	FSM	ENSG00000131966.14	ENST00000254286.9	2408	13	0	0	0	0	multi-exon	TRUE	non_canonical	2	219	junction_5	67.456313023072	742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTGGCTTCATTCTTT	58194757	True	NA	5	True	AATGAA	-17	NA	58200148	58235636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998_58209108_58211291_58211400_58213630_58213699_58215204_58215285_58219693_58219730_58223621_58223702_58223782_58223857_58230398_58230481_58232065_58232268_58234369
transcript_4330.known	chr1	+	2654	6	FSM	ENSG00000163874.11	ENST00000373087.7	2654	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	9.75704873412037	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATTGTCTTTGTTAT	37474021	True	NA	14	True	AATAAA	-26	NA	37474579	37484377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37474630_37475458_37475940_37480289_37480430_37481600_37481836_37482433_37482541_37482736
transcript_4331.known	chr1	-	4702	7	FSM	ENSG00000163875.16	ENST00000296214.10	4702	7	0	0	0	0	multi-exon	TRUE	canonical	3	340	junction_4	34.3834585552737	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACTGCTGATAATTGTTT	-37510726	True	NA	NA	False	AATAAA	-15	NA	37514766	37489992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_43310.known	chr14	+	540	4	FSM	ENSG00000131966.14	ENST00000556312.5	540	4	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_3	34.3155293643498	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATTGTGTATGGCACACAG	58194778	True	NA	NA	False	AATAAA	-18	NA	58200169	58209257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58200295_58202854_58202928_58207935_58208019_58208998
transcript_4332.known	chr1	-	2147	8	FSM	ENSG00000163875.16	ENST00000373075.6	2147	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	180.676506497109	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTGACTCT	-37510723	True	NA	-3	True	AATAAA	-18	NA	37514763	37492574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37496706_37496737_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_43321.known	chr14	+	814	10	FSM	ENSG00000100567.13	ENST00000557508.5	814	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	881.130012407608	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAGTTTGGTTAATATCT	58221206	True	NA	25	True	ATTAAA	-18	NA	58244903	58272007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_4333.known	chr1	-	1408	8	FSM	ENSG00000163875.16	ENST00000475828.5	1408	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	145.724649491388	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAATTTCACAGGCTT	-37510716	True	NA	-49	True	TTTAAA	-37	NA	37514756	37493334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37494108_37495884_37495919_37496546_37496605_37501803_37501997_37509277_37509324_37509454_37509543_37513422_37513539_37514656
transcript_4334.known	chr1	-	4554	4	FSM	ENSG00000163877.11	ENST00000296215.8	4554	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4.64279609239471	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTCTCTTGGGTAAAAT	-37552378	True	NA	0	True	ATTAAA	-22	NA	37554293	37534448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37538013_37540156_37540756_37552644_37552748_37554005
transcript_43355.known	chr14	-	741	5	FSM	ENSG00000257621.9	ENST00000554378.5	741	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	40.034360242172	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTGAACCCAGGAGGCAG	-58296049	True	NA	NA	False	NA	NA	NA	58298134	58267103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58267394_58273978_58274011_58285590_58285757_58291634_58291708_58297954
transcript_43382.known	chr14	-	1039	4	FSM	ENSG00000257621.9	ENST00000556002.5	1039	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	40.9986449640581	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAATTAAGCATTCTTTC	-58296017	True	NA	NA	False	NA	NA	NA	58298102	58266607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58267394_58273978_58274011_58291634_58291708_58297954
transcript_43385.known	chr14	-	903	4	FSM	ENSG00000257621.9	ENST00000555275.5	903	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	33.0756708170825	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACGACTGGTGAAGACATC	-58296037	True	NA	NA	False	TATAAA	-43	NA	58298122	58266888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58267394_58273978_58274136_58291634_58291708_58297954
transcript_43404.known	chr14	-	398	4	FSM	ENSG00000257621.9	ENST00000553657.5	398	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	11.4697670227235	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTACCAGCATCAAGATG	-58295999	True	NA	NA	False	TTTAAA	-25	NA	58298084	58274013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274136_58291634_58291708_58293065_58293139_58297954
transcript_4341.known	chr1	-	2350	16	FSM	ENSG00000134697.13	ENST00000373062.8	2350	16	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_9	51.119207088269	1504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAGAAATTGTGTTTTCTT	-37589626	True	NA	-38	True	ATTAAA	-18	NA	37595937	37566815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37567008_37567672_37567765_37568274_37568358_37568850_37569303_37574342_37574457_37574664_37574824_37575594_37575700_37576427_37576557_37582222_37582337_37582777_37582937_37583866_37583934_37587310_37587496_37590705_37590846_37592711_37592807_37593761_37593847_37595758
transcript_43414.known	chr14	-	604	3	FSM	ENSG00000257621.9	ENST00000556400.5	604	3	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	50	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGCTGAGGCAGGAGACTC	-58296030	True	NA	NA	False	NA	NA	NA	58298115	58273640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274011_58291634_58291708_58297954
transcript_43415.known	chr14	-	1983	3	FSM	ENSG00000257621.9	ENST00000555707.5	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	40.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTGACTCATGTATTG	-58296044	True	NA	NA	False	AATAAA	-16	NA	58298129	58272400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58274136_58291634_58291708_58297954
transcript_43416.known	chr14	+	435	2	FSM	ENSG00000100567.13	ENST00000554456.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATGAATCCTTCAGTT	58221176	True	NA	2	True	AATAAA	-17	NA	58244873	58245478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58245111
transcript_43418.known	chr14	+	955	11	FSM	ENSG00000100567.13	ENST00000216455.9	955	11	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	208.499424459637	33194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATTGAAGTTTGGTTAATA	58221145	True	NA	22	True	ATTAAA	-15	NA	58244842	58272004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_43419.known	chr14	+	908	11	FSM	ENSG00000100567.13	ENST00000412908.6	908	11	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_5	859.0097147297	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGTTAATATCTGCTTT	58221179	True	NA	30	True	ATTAAA	-23	NA	58244876	58272012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924_58257999_58260968_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933_58270999_58271850
transcript_43420.known	chr14	+	925	5	FSM	ENSG00000100567.13	ENST00000553665.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	3	2503	junction_3	255.452539623312	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGGTTTCAATAGT	58221158	True	NA	NA	False	AATAGA	-33	NA	58244855	58258454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58252118_58252243_58257744_58257847_58257924
transcript_43421.known	chr14	+	654	9	FSM	ENSG00000100567.13	ENST00000557087.5	654	9	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	925.254010731648	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGCCACAGCACAAAAAC	58221168	True	NA	NA	False	NA	NA	NA	58244865	58270998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58244942_58247749_58247833_58257744_58257847_58257924_58257999_58260947_58261021_58263704_58263771_58267473_58267521_58270417_58270486_58270933
transcript_43425.nic	chr14	+	1860	16	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-114	21014	-62	-7960	5prime_fragment	FALSE	canonical	3	33	junction_10	10.0651212941855	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGCTACTACTGGGGAGAA	58298424	False	NA	NA	False	AAAAAG	-5	NA	58298441	58351212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646_58347879_58351072
transcript_43429.nic	chr14	+	1570	15	ISM	ENSG00000032219.19	ENST00000395168.7	4051	24	-114	24498	-62	-11444	5prime_fragment	FALSE	canonical	3	33	junction_10	10.3972131273879	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGGAAAAAAAAGACTTAGA	58298424	False	NA	NA	False	AGTAAA	-2	NA	58298441	58347728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_58298701_58299797_58299861_58301579_58301691_58304943_58305010_58306021_58306113_58318541_58318622_58318710_58318806_58323484_58323618_58328236_58328317_58329527_58329605_58330002_58330170_58344694_58344768_58346410_58346506_58347019_58347118_58347646
transcript_43436.known	chr14	+	5942	30	FSM	ENSG00000100578.18	ENST00000650904.1	5942	30	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_17	19.3210561425543	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAAACCTGTGAAACAT	58426131	True	NA	-68	True	TATAAA	-3	NA	58427692	58548736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58428464_58429362_58429434_58430647_58430718_58432387_58432458_58442705_58442881_58443953_58444176_58448339_58448494_58450578_58450747_58453349_58453474_58456701_58456811_58457758_58457980_58458472_58458546_58459842_58460071_58460985_58461161_58465834_58466030_58467734_58467923_58470612_58470724_58474606_58474798_58477122_58477242_58482512_58482713_58487006_58487167_58487886_58488110_58488620_58488875_58490163_58490241_58492143_58492276_58498782_58498961_58508554_58508710_58512521_58512628_58540070_58540137_58547780
transcript_43442.known	chr14	-	1252	6	FSM	ENSG00000100575.14	ENST00000395159.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	103.895331945184	1365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATGCATGATCCTTTT	-58427467	False	NA	-9	True	CATAAA	-19	NA	58427531	58408494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58424007_58424096_58427053_58427243_58427391
transcript_43457.known	chr14	-	796	4	FSM	ENSG00000100575.14	ENST00000555593.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	133.029654171124	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTGTTTATACTGTATG	-58427441	False	NA	-17	True	AATAAA	-16	NA	58427505	58408647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58409169_58410842_58410939_58411906_58411972_58427391
transcript_43460.known	chr14	-	571	3	FSM	ENSG00000100575.14	ENST00000557397.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	148	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAGGCCTTATGATT	-58420024	True	NA	-89	True	AATAGA	-37	NA	58427171	58408811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_58409169_58410842_58410939_58427053
transcript_43461.known	chr14	+	376	1	FSM	ENSG00000213598.4	ENST00000480540.1	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2072	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTGATCGTCAGATACAT	NA	False	NA	NA	False	NA	NA	NA	58794653	58795029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_58794700_58795000
transcript_43462.known	chr14	+	5890	25	FSM	ENSG00000100592.16	ENST00000360909.8	5890	25	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	11.0471684406257	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATGCTTTCTATGAAT	59186488	True	NA	16	True	AATAAA	-22	NA	59188666	59371403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59188769_59263440_59263661_59291216_59291307_59315279_59315352_59320489_59320585_59322891_59323226_59324127_59324239_59324350_59324455_59325663_59325731_59325959_59326078_59326509_59326649_59326932_59326992_59330500_59330689_59331208_59331509_59331812_59331921_59340073_59340181_59347538_59347624_59352525_59352633_59353875_59353965_59355164_59355334_59359396_59359505_59360801_59360863_59363650_59363783_59367428_59367600_59368649
transcript_43472.known	chr14	+	2524	8	FSM	ENSG00000050130.18	ENST00000356057.9	2524	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	287.754288607911	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAATCCTCAATTGAGTA	NA	False	NA	68	True	ATTAAA	-15	NA	59484442	59505404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59484989_59485117_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43478.known	chr14	+	1636	7	FSM	ENSG00000050130.18	ENST00000425728.6	1636	7	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	171.836566409934	380	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAATTTCAATGTTTTGA	59478017	True	NA	NA	False	AATAAA	-13	NA	59484502	59504703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59486730_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_4348.known	chr1	+	2628	6	FSM	ENSG00000163879.11	ENST00000652629.1	2628	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	13.3266649991661	822	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTTGTCTGAATTTTT	37555445	True	NA	15	True	AATAAA	-17	NA	37556939	37566857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37557076_37557602_37557749_37559326_37559497_37561556_37561736_37562080_37562246_37565025
transcript_43485.known	chr14	+	2347	7	FSM	ENSG00000050130.18	ENST00000616435.5	2347	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_1	97.135072050327	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTCAATTGAGTAATTGTA	59478031	True	NA	74	True	ATTAAA	-21	NA	59484516	59505410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43494.known	chr14	+	1191	7	FSM	ENSG00000050130.18	ENST00000553941.5	1191	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	239.373313745149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGTAATATTATCTGCTACA	59478083	True	NA	NA	False	NA	NA	NA	59484568	59504274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59484594_59486680_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43499.known	chr14	+	2137	7	FSM	ENSG00000050130.18	ENST00000554271.5	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	242.279051692235	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	59478059	True	NA	NA	False	AATAAA	-15	NA	59484544	59504705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_59485117_59486712_59486805_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43516.nic	chr14	+	1578	6	NIC	ENSG00000050130.18	novel	1636	7	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	229.047593307592	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTTCAATGTTTTGACA	59478003	True	NA	NA	False	AATAAA	-15	NA	59484488	59504705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43517.nic	chr14	+	2216	6	NIC	ENSG00000050130.18	novel	2347	7	NA	NA	-3	-61	intron_retention	FALSE	canonical	3	76	junction_1	229.047593307592	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTTGTATTGCACACA	59478003	True	NA	7	True	AATAAA	-16	NA	59484488	59505343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_59484594_59487673_59487829_59495017_59495225_59498726_59498909_59501190_59501268_59503853
transcript_43526.known	chr14	-	1516	5	FSM	ENSG00000126790.12	ENST00000247194.9	1516	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	24.0767003553228	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTACAAGCTCATTATTTT	-59483289	True	NA	NA	False	ATTAAA	-34	NA	59484408	59472605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_59473091_59475868_59476007_59476091_59476215_59479181_59479352_59483808
transcript_43536.known	chr14	-	758	4	FSM	ENSG00000126790.12	ENST00000481608.1	758	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	22.2910046630673	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGCACCCTTAGCTT	-59482887	False	NA	NA	False	NA	NA	NA	59484006	59475868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_59476007_59476091_59476215_59479181_59479352_59483679
transcript_43538.known	chr14	-	1703	7	FSM	ENSG00000139970.18	ENST00000342503.8	1703	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	5.27309733985213	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTCTCTTCTCATGCA	-59630804	True	NA	-2	True	AATAAA	-21	NA	59630814	59595976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_59596788_59603064_59603124_59603211_59603259_59603851_59603922_59605367_59605507_59607284_59607493_59630445
transcript_4354.known	chr1	-	539	2	FSM	ENSG00000134697.13	ENST00000488496.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTTAAATATGGCCAGATA	-37589624	True	NA	NA	False	ATTAAA	-6	NA	37595935	37593484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37593847_37595758
transcript_43554.known	chr14	+	18069	11	FSM	ENSG00000126773.13	ENST00000406854.6	18069	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	23.8671322114744	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	60090865	True	NA	NA	False	AATAAA	-16	NA	60091922	60148221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60092420_60107585_60108328_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_43555.known	chr14	+	17339	10	FSM	ENSG00000126773.13	ENST00000317623.8	17339	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	25.2869946566497	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGGATTGCTTAAATTT	NA	False	NA	NA	False	AATAAA	-16	NA	60091910	60148221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60092420_60114699_60114880_60114973_60115462_60115718_60115820_60115940_60116061_60118328_60118693_60121195_60121300_60124217_60125252_60125636_60125824_60133969
transcript_43562.known	chr14	-	1956	7	FSM	ENSG00000100612.14	ENST00000557185.6	1956	7	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_3	25.2102272015854	1934	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGTGCTTAGTATTAGT	-60161113	True	NA	NA	False	ATTAAA	-26	NA	60165398	60144118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60145014_60149352_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_43565.known	chr14	-	1361	6	FSM	ENSG00000100612.14	ENST00000554101.5	1361	6	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_2	20.5465325541805	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAGAAAAATAAATAAAAAA	-60165266	False	4285	NA	False	NA	NA	NA	60165293	60148947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60149569_60150064_60150188_60152938_60153179_60153958_60154066_60155999_60156153_60165176
transcript_43570.known	chr14	-	924	4	FSM	ENSG00000100612.14	ENST00000556502.1	924	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	15.1510909031513	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGATAATAAGATGT	-60161065	True	NA	NA	False	NA	NA	NA	60165350	60152688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60153179_60153958_60154066_60155999_60156153_60165176
transcript_43572.known	chr14	+	8231	6	FSM	ENSG00000100614.18	ENST00000395076.9	8231	6	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_3	16.5819178625393	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGTATTTATGATTG	60247783	True	NA	NA	False	AATAAA	-16	NA	60249220	60299087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60249678_60282683_60283538_60285623_60285742_60289805_60289915_60291396_60291455_60292452
transcript_43573.known	chr14	-	2780	18	FSM	ENSG00000179008.9	ENST00000321731.8	2780	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	5.905835481417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGATGTGACTGTTGA	-60485933	True	NA	-1	True	AATAAA	-14	NA	60486063	60435955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60437048_60442073_60442132_60455000_60455146_60456916_60457096_60458677_60458740_60461353_60461413_60461507_60461594_60465978_60466056_60466916_60467045_60468444_60468537_60469532_60469654_60471416_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_43580.nic	chr14	-	891	7	ISM	ENSG00000179008.9	ENST00000321731.8	2780	18	-78	35329	-78	347	5prime_fragment	FALSE	canonical	2	8	junction_6	5.15320827791344	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	NA	False	NA	-4	True	ATTAAA	-16	NA	60486141	60471284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_60471460_60471551_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_43587.nic	chr14	-	983	6	NIC	ENSG00000179008.9	novel	2780	18	NA	NA	-78	347	intron_retention	FALSE	canonical	2	8	junction_5	5.40370243444252	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAAAGGTCATCTTGGAT	NA	False	NA	-4	True	ATTAAA	-16	NA	60486141	60471284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485029_60485087_60485944
transcript_43588.known	chr14	-	482	5	FSM	ENSG00000179008.9	ENST00000555476.5	482	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	6.81909084849293	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATGAAGAAATTCAAAGCA	-60485914	True	NA	NA	False	AAGAAA	-6	NA	60486044	60471631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60471740_60478299_60478390_60483690_60483818_60484880_60484938_60485944
transcript_4359.known	chr1	-	2696	5	FSM	ENSG00000116922.15	ENST00000486637.2	2696	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	100.193562667469	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686749	True	NA	0	True	AATAAA	-13	NA	37690529	37681569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690001
transcript_43590.known	chr14	+	868	2	FSM	ENSG00000258670.1	ENST00000557618.1	868	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAGCTAAGAATTGGAAT	60515060	True	NA	NA	False	NA	NA	NA	60515118	60554916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60515305_60554234
transcript_43591.known	chr14	-	1959	2	FSM	ENSG00000126778.12	ENST00000554986.2	1959	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGCTTGCTTGTGCTTTGT	-60658247	False	NA	NA	False	ATTAAA	-22	NA	60658259	60644695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60646578_60658182
transcript_43593.known	chr14	-	6491	3	FSM	ENSG00000100625.9	ENST00000216513.5	6491	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	7	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTGCATTGAAAATTATTT	-60722391	True	NA	-16	True	AATAAA	-18	NA	60724351	60709538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60714204_60719759_60720446_60723211
transcript_4360.known	chr1	-	919	5	FSM	ENSG00000116922.15	ENST00000464085.5	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	112.422195317473	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGGAGACCACGGGTAC	-37686724	True	NA	NA	False	NA	NA	NA	37690504	37683110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689887_37690215
transcript_43605.nnic	chr14	+	1315	8	NNC	ENSG00000020426.11	novel	680	5	NA	NA	-11768	0	intron_retention	FALSE	canonical	3	54	junction_1	181.301530324372	191	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	NA	False	NA	19	True	AATAAA	-16	NA	60722973	60968678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_60723119_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_4361.known	chr1	-	2355	5	FSM	ENSG00000116922.15	ENST00000358011.8	2355	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	117.885537705013	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTGTCAAGTCTTATG	-37686740	True	NA	0	True	AATAAA	-13	NA	37690520	37681569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37683161_37683318_37683438_37686272_37686453_37689605_37689884_37690333
transcript_43627.known	chr14	+	612	2	FSM	ENSG00000020426.11	ENST00000555545.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGGGCAACTTGCTGTC	60723424	True	NA	NA	False	NA	NA	NA	60734741	60753954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60753552
transcript_43628.known	chr14	+	2648	8	FSM	ENSG00000020426.11	ENST00000261245.9	2648	8	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_3	42.3883888606784	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTAGTTGCTATTGC	60723443	True	NA	NA	False	AATAAA	-27	NA	60734760	60969965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60818721_60818848_60879713_60879836_60968228
transcript_43629.known	chr14	+	1220	7	FSM	ENSG00000020426.11	ENST00000539616.6	1220	7	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	201.14650547963	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTTCTGTGGTTTTTCTCT	60723458	True	NA	19	True	AATAAA	-16	NA	60734775	60968678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60734952_60796216_60796370_60798086_60798161_60808324_60808429_60811986_60812128_60879713_60879836_60968228
transcript_43631.nnic	chr14	+	751	3	NIC	ENSG00000258892.1	novel	200	2	NA	NA	-144939	-13905	intron_retention	FALSE	canonical	0	0	junction_1	283	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGGTTTTTCTCTTA	60723457	True	NA	21	True	AATAAA	-18	NA	60734774	60968680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_60734952_60879713_60879836_60968228
transcript_43634.nic	chr14	+	1726	17	NIC	ENSG00000139974.16	novel	2501	21	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_15	31.0714901477222	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTATTTTGT	60980157	True	NA	6	True	AATAAA	-17	NA	60981119	61083729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078829_61078928_61083549
transcript_43635.nic	chr14	+	1721	17	NIC	ENSG00000139974.16	novel	1568	17	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_16	32.7948166636132	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTTTGTGGTATTTTGT	60980157	True	NA	6	True	AATAAA	-17	NA	60981119	61083729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61078829_61078928_61083554
transcript_43637.known	chr14	+	1605	16	FSM	ENSG00000139974.16	ENST00000267488.9	1605	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	19.0717941823346	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTGGGTTGATCTTTTG	60980282	True	NA	4	True	AAAAAG	-25	NA	60981244	61052630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_4364.known	chr1	-	763	3	FSM	ENSG00000116922.15	ENST00000461359.5	763	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_2	42.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATCCTTTGCACACATTTC	-37686740	True	NA	NA	False	NA	NA	NA	37690520	37686272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37686453_37689605_37689884_37690215
transcript_43642.nic	chr14	+	1507	15	NIC	ENSG00000139974.16	novel	1605	16	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	2	5	junction_9	29.9492768472541	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACCCCTAGTTGCAAGAA	60980157	True	NA	24	True	AATAAA	-36	NA	60981119	61052461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444_61030524_61037058_61037142_61037624_61037684_61043146_61043213_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348
transcript_4365.known	chr1	+	2303	11	FSM	ENSG00000134690.11	ENST00000327331.2	2303	11	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_1	87.6296753388942	1126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAATCACTGTTCATCCT	37685215	True	NA	27	True	AATAAA	-21	NA	37692480	37709713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37692579_37692675_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_43665.nic	chr14	+	1156	6	ISM	ENSG00000139974.16	ENST00000267488.9	1605	16	-125	21591	6	0	5prime_fragment	FALSE	canonical	3	86	junction_4	12.9151074327704	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAATTGTTTCATTTCCTG	60980157	True	NA	NA	False	AATAAA	-14	NA	60981119	61031039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_60981383_60982507_60982639_60984729_60984804_61015903_61015957_61019540_61019581_61030444
transcript_43676.nnic	chr14	+	2009	4	NNC	ENSG00000139974.16	novel	571	4	NA	NA	-24	-2294	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	52.0917993119412	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAGTTTGTGATAATTTCT	60980239	True	NA	NA	False	AATAAA	-20	NA	60981201	60999942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_60981383_60982507_60982639_60984729_60984804_60998319
transcript_43677.known	chr14	+	559	4	FSM	ENSG00000139974.16	ENST00000532148.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	52.563189485503	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACACTGGCATCTAAACACA	60980274	True	NA	NA	False	TTTAAA	-21	NA	60981236	61002236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981383_60982507_60982639_60984729_60984804_61002028
transcript_4368.known	chr1	+	2371	10	FSM	ENSG00000134690.11	ENST00000373055.6	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	430	junction_4	29.8332816055831	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTTCATCCTGCCTGT	37685250	True	NA	33	True	AATAAA	-27	NA	37692515	37709719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904_37698978_37700435_37700522_37701753_37701819_37703251_37703348_37705440_37705568_37706977_37707065_37708321
transcript_43687.known	chr14	+	2787	20	FSM	ENSG00000139974.16	ENST00000525723.6	2787	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	45.7970350683604	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTGGTATTTTGTTGTG	60980263	True	NA	10	True	AATAAA	-21	NA	60981225	61083733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_60981688_60982507_60982639_60984729_60984804_60987051_60987158_61015903_61015957_61019540_61019581_61030444_61030524_61034018_61034114_61037058_61037142_61037624_61037684_61043146_61043213_61043449_61043504_61045345_61045426_61046066_61046168_61050511_61050637_61051786_61051932_61052040_61052136_61052348_61052986_61078809_61078928_61083549
transcript_43690.nic	chr14	-	1694	5	NIC	ENSG00000126814.7	novel	5304	5	NA	NA	-21	-3570	combination_of_known_junctions	FALSE	canonical	3	6	junction_4	60.4648658313239	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTGTACTTTGCCTTATT	-60978929	False	NA	0	True	AATAAA	-29	NA	60981100	60975010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60981023
transcript_43693.known	chr14	-	5304	5	FSM	ENSG00000126814.7	ENST00000261249.7	5304	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	7.1239034243875	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGCAATTTGTTTTAGC	-60978908	True	NA	2	True	AATAAA	-30	NA	60981079	60971440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_60975195_60975474_60976127_60977513_60977639_60979230_60979887_60980962
transcript_43695.known	chr14	+	3922	15	FSM	ENSG00000100644.17	ENST00000394997.5	3922	15	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	166.390016993514	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61684353	True	NA	23	True	AATAAA	-19	NA	61695539	61748258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_61695840_61720378_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61745690_61745818_61746933
transcript_43697.known	chr14	+	3555	14	FSM	ENSG00000100644.17	ENST00000323441.10	3555	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_13	192.583402358317	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTTGATCAGCTTTTAT	61695766	False	NA	23	True	AATAAA	-19	NA	61695776	61748258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_61695840_61720381_61720573_61721508_61721655_61721738_61721824_61726705_61726819_61727452_61727656_61732417_61732525_61734137_61734286_61736888_61737110_61738086_61738374_61740504_61740628_61740754_61741189_61744704_61744814_61746933
transcript_43703.known	chr14	-	533	3	FSM	ENSG00000258667.2	ENST00000554254.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTAGAACCTGTATTTC	-61750930	True	NA	NA	False	NA	NA	NA	61751097	61715557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_61715829_61716968_61717018_61750884
transcript_43704.nnic	chr14	-	558	2	NNC	ENSG00000258667.2	novel	1532	3	NA	NA	-33	-4735	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCACAGAAGGATTAGAAGAT	NA	False	NA	-13	True	AATAAA	-19	NA	61751132	61720292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_61720603_61750884
transcript_43705.known	chr14	+	2593	10	FSM	ENSG00000023608.5	ENST00000216294.5	2593	10	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	23.5172644751693	575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATGCAGTCACAATTGTT	61758720	True	NA	15	True	AATAAA	-18	NA	61762419	61796428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_61762589_61766875_61767036_61767211_61767353_61768635_61768741_61776094_61776254_61778071_61778141_61778847_61778911_61782246_61782398_61792806_61792903_61794948
transcript_43713.known	chr14	-	976	4	FSM	ENSG00000140006.12	ENST00000554717.1	976	4	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_3	57.249939349798	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTATAAACAGATTTACT	-63639213	True	NA	NA	False	NA	NA	NA	63641853	63599262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63599974_63624927_63625034_63641298_63641408_63641803
transcript_43717.known	chr14	-	1687	3	FSM	ENSG00000140006.12	ENST00000267522.7	1687	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	53.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGACTTTTTAGAAGGA	-63641393	False	NA	-82	True	AGTAAA	-26	NA	63641407	63598501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63599974_63624927_63625034_63641298
transcript_43718.known	chr14	-	3109	3	FSM	ENSG00000140006.12	ENST00000620954.2	3109	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTTGGGCAGTTATT	-63639231	True	NA	NA	False	ATTAAA	-20	NA	63641871	63597038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63599974_63624927_63625034_63641803
transcript_43723.known	chr14	+	921	3	FSM	ENSG00000274015.3	ENST00000665010.1	921	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCTTCAAGCATCTTT	63641826	True	NA	NA	False	AATAAA	-19	NA	63642034	63665593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642198_63651331_63651420_63664923
transcript_43725.nic	chr14	+	372	2	FSM	ENSG00000274015.3	ENST00000686344.1	314	2	-76	18	-50	-18	multi-exon	FALSE	canonical	3	71	junction_1	0	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	63641955	False	NA	13	True	AATGAA	-27	NA	63641984	63651490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642198_63651331
transcript_43726.nic	chr14	+	303	2	ISM	ENSG00000274015.3	ENST00000668431.1	919	3	-19	14102	7	-18	5prime_fragment	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTCTTGATACTTTATT	63641833	True	NA	13	True	AATGAA	-27	NA	63642041	63651490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_63642186_63651331
transcript_43727.known	chr14	+	554	1	FSM	ENSG00000274015.3	ENST00000620835.1	554	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTGCTGTGCCTAGCTG	63641934	True	NA	NA	False	AATAAA	-19	NA	63642142	63642696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642100_63642700
transcript_43728.known	chr14	+	840	3	FSM	ENSG00000274015.3	ENST00000656655.1	840	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	35.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGACCTTCAAGCATCTTT	63641944	True	NA	NA	False	AATAAA	-19	NA	63642152	63665593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_63642198_63651331_63651457_63664923
transcript_43729.known	chr14	-	3336	3	FSM	ENSG00000126821.8	ENST00000247225.7	3336	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	4	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGGTTTTGCTTTGTTTTG	-63727412	True	NA	NA	False	AATAAA	-20	NA	63728065	63684215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_63686657_63698568_63698659_63727260
transcript_43736.nic	chr14	-	1079	2	ISM	ENSG00000140009.19	ENST00000554572.5	3588	14	-587	109721	-571	-101365	5prime_fragment	FALSE	canonical	3	5	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCTGTTTGTAAGGTAAT	-64338672	False	NA	-11	True	AATAAA	-15	NA	64338683	64336427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_64336721_64337897
transcript_43742.known	chr14	+	3289	29	FSM	ENSG00000100714.17	ENST00000651537.1	3289	29	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_27	389.936930732368	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGTGTTGCAATATGA	64368348	True	NA	9	True	AATAAA	-17	NA	64388365	64460004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64458428_64458598_64459758
transcript_43744.known	chr14	+	3154	28	FSM	ENSG00000100714.17	ENST00000652337.1	3154	28	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	107.803433372567	2261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACAGCCTTAACAGACTGT	64368335	True	NA	9	True	AATAAA	-38	NA	64388352	64460025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_43748.known	chr14	+	6814	27	FSM	ENSG00000100714.17	ENST00000545908.6	6814	27	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_26	286.402479349455	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTTTCAGTTCCCTTTT	64387985	True	NA	15	True	AATAAA	-19	NA	64388030	64463457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64459758
transcript_43758.known	chr14	+	3082	26	FSM	ENSG00000100714.17	ENST00000557370.3	3082	26	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_20	92.8941246796588	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTGGGGTAGTGCTAACAT	64368344	True	NA	NA	False	NA	NA	NA	64388361	64455173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722
transcript_4376.nic	chr1	+	1187	4	ISM	ENSG00000134690.11	ENST00000373055.6	2371	10	-58	10125	-23	-10119	5prime_fragment	FALSE	canonical	3	454	junction_3	29.4882274061286	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAGGAAAGGAAAGGAAA	37685192	True	NA	NA	False	AAAAAG	-17	NA	37692457	37699594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_37692785_37692904_37693034_37695909_37695951_37698904
transcript_43768.known	chr14	+	2063	16	FSM	ENSG00000100714.17	ENST00000555709.7	2063	16	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_6	367.1111850955	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACTATAACATTTATTTTA	64368293	True	NA	NA	False	GATAAA	-18	NA	64388310	64439581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095
transcript_43778.known	chr14	-	10365	3	FSM	ENSG00000089775.12	ENST00000608382.6	10365	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	28	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCATGGTGTCCTTTCATG	-64503738	True	NA	-1	True	AATAAA	-18	NA	64503838	64478050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64488058_64490360_64490541_64503660
transcript_4378.known	chr1	-	2050	3	FSM	ENSG00000183317.17	ENST00000319637.6	2050	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGTCCTTTTCTGGGTGC	NA	False	NA	NA	False	AATATA	-28	NA	37765133	37760271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37762084_37762784_37762850_37764960
transcript_43781.known	chr14	+	2497	1	FSM	ENSG00000126803.10	ENST00000247207.7	2497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	440	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGTCTTGGAGTTTTC	64537688	True	NA	10	True	AGTAAA	-19	NA	64540740	64543237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64540700_64543200
transcript_43782.known	chr14	+	3295	29	FSM	ENSG00000100714.17	ENST00000554768.6	3295	29	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	396.556851831732	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTGCCATCTTGGTGTTG	64368290	True	NA	1	True	AATAAA	-9	NA	64388307	64459996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64388469_64389000_64389126_64400792_64400878_64411089_64411150_64412471_64412526_64415357_64415495_64415638_64415740_64417887_64418025_64419813_64419926_64424803_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64453753_64453862_64454722_64454876_64458213_64458308_64459758
transcript_43783.known	chr14	+	2183	19	FSM	ENSG00000100714.17	ENST00000652509.1	2183	19	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_16	351.163972813939	319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTTGGTGTTGCAATATGA	64424794	True	NA	9	True	AATAAA	-17	NA	64424843	64460004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64424932_64425729_64425828_64426018_64426193_64427336_64427474_64430183_64430231_64431531_64431640_64431786_64431862_64435568_64435672_64439095_64439173_64440125_64440267_64441384_64441454_64442053_64442166_64442262_64442403_64444692_64444735_64448216_64448318_64449444_64449623_64454722_64454876_64458213_64458308_64459758
transcript_43784.known	chr14	+	6487	2	FSM	ENSG00000179841.8	ENST00000394718.4	6487	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATTCAGATCTTTTAA	64464978	True	NA	6	True	AATAAA	-16	NA	64465498	64474503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64465614_64468131
transcript_43785.known	chr14	+	3642	2	FSM	ENSG00000126804.14	ENST00000683701.1	3642	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCTTTTAATGTGAATTAC	64503885	True	NA	NA	False	AATAAA	-19	NA	64504769	64524951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64504947_64521486
transcript_43786.known	chr14	+	1349	12	FSM	ENSG00000165807.8	ENST00000298705.6	1349	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.06105164522812	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGGTTATTCGTTGTT	64549932	True	NA	NA	False	AGTAAA	-17	NA	64549960	64589381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64550067_64550920_64550986_64552813_64552862_64564750_64564838_64565356_64565455_64565625_64565693_64568348_64568448_64574454_64574590_64586836_64586880_64587193_64587373_64588103_64588296_64589151
transcript_43789.nnic	chr14	+	1267	10	NIC	ENSG00000165807.8	novel	1349	12	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2.31474073955552	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGATGGTTATTCGTTGTT	64549901	True	NA	NA	False	AGTAAA	-17	NA	64549929	64589381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_64550067_64564750_64564838_64565356_64565455_64565625_64565693_64568348_64568448_64574454_64574590_64586836_64586880_64587193_64587373_64588103_64588296_64589151
transcript_4379.nnic	chr1	-	1532	5	NNC	ENSG00000196449.4	novel	1848	5	NA	NA	520	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.298159689998	221	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTTTCTTCTTTTGAA	-37802673	False	NA	-3	True	ATTAAA	-16	NA	37807688	37802944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807587
transcript_43792.known	chr14	+	1468	14	FSM	ENSG00000125954.13	ENST00000549987.1	1468	14	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_3	561.791586784858	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTTTATACGTTTCAATA	64901351	True	NA	-36	True	NA	NA	NA	64914492	65061361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_43799.known	chr14	-	922	2	FSM	ENSG00000176153.13	ENST00000389614.6	922	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCCAGCCTGTGTGTGTGT	-64942644	True	NA	-5	True	AATAAA	-16	NA	64942745	64939157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_64939839_64942504
transcript_4380.nnic	chr1	-	958	5	NNC	ENSG00000196449.4	novel	1848	5	NA	NA	451	-643	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	160.298159689998	36	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGAGCCTCCTCTCTGGT	-37802742	False	NA	0	True	ATTAAA	-19	NA	37807757	37803587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_37803998_37804301_37804445_37806856_37806977_37807100_37807216_37807587
transcript_43800.known	chr14	+	439	3	FSM	ENSG00000258289.10	ENST00000548752.7	439	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	848.5	1428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGCATATTTTTTTTC	64901273	True	NA	52	True	AATACA	-41	NA	64914414	64932320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64932137
transcript_43801.known	chr14	+	1521	3	FSM	ENSG00000258289.10	ENST00000551947.6	1521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	930	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATATCTCTGTCTCCAAA	64901301	True	NA	NA	False	AATATA	-18	NA	64914442	64944591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64943298
transcript_43802.known	chr14	+	1023	4	FSM	ENSG00000258289.10	ENST00000551093.6	1023	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	791.714314355599	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTGATTTGTTGAGATGAG	64901335	True	NA	NA	False	NA	NA	NA	64914476	64944056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64914535_64923990_64924127_64926009_64926081_64943298
transcript_43803.known	chr14	+	2711	12	FSM	ENSG00000257365.8	ENST00000246166.3	2711	12	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_10	12.4389417848655	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGATGTCTCTTATTTGTG	64985275	True	NA	4	True	AATAAA	-15	NA	64986894	65062650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_64987098_65004248_65004314_65012316_65012390_65015624_65015717_65027452_65027600_65027697_65027782_65032609_65032697_65040789_65040920_65044310_65044444_65053237_65053350_65054574_65054690_65061180
transcript_43811.known	chr14	-	623	6	FSM	ENSG00000125952.20	ENST00000553928.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	137.418193846375	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAAAAACTGTCTGTCT	-65102328	False	NA	NA	False	NA	NA	NA	65102360	65076457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077327_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43812.known	chr14	-	2097	6	FSM	ENSG00000125952.20	ENST00000394606.6	2097	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	139.949133616468	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093166	True	NA	-3	True	AATAAA	-17	NA	65102519	65075126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077343_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43814.nic	chr14	-	740	6	NIC	ENSG00000125952.20	novel	615	5	NA	NA	-23	-6	combination_of_known_junctions	FALSE	canonical	1	5	junction_1	139.150278476186	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGGGTTGACCTTCCA	-65093214	True	NA	NA	False	AATAAA	-16	NA	65102567	65077292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_65077429_65077562_65077644_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43815.known	chr14	-	2010	5	FSM	ENSG00000125952.20	ENST00000358664.9	2010	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_3	116.77836914429	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGGTGGTGTCTTCTT	-65093164	True	NA	-3	True	AATAAA	-17	NA	65102517	65075126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43821.known	chr14	-	615	5	FSM	ENSG00000125952.20	ENST00000556979.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	135.424102359957	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGACCTTCCAGGCTCA	-65093164	True	NA	NA	False	AATAAA	-22	NA	65102517	65077286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65101545_65101573_65102303
transcript_43823.known	chr14	-	571	5	FSM	ENSG00000125952.20	ENST00000557746.5	571	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	162.325868240401	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTCTTCCTCCCTCATGG	-65093164	True	NA	NA	False	NA	NA	NA	65102517	65077384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65077429_65077562_65077644_65077912_65078037_65093707_65093816_65102303
transcript_43825.known	chr14	-	330	4	FSM	ENSG00000125952.20	ENST00000341653.6	330	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	70.0618774132314	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGAC	-65102355	False	9353	NA	False	AAAAAG	-21	NA	65102387	65006173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65006285_65093707_65093816_65101545_65101573_65102303
transcript_43826.known	chr14	-	1973	4	FSM	ENSG00000125952.20	ENST00000358402.8	1973	4	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_3	67.8871612800732	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGTGGTGTCTTCTTACC	-65093151	True	NA	0	True	AATAAA	-20	NA	65102504	65075123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102303
transcript_43827.known	chr14	-	474	4	FSM	ENSG00000125952.20	ENST00000556892.5	474	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	182.435376686285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGACAACAGCCTCTACA	-65102663	True	NA	NA	False	NA	NA	NA	65102695	65076608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65076664_65077912_65078037_65093707_65093816_65102508
transcript_4383.known	chr1	-	7937	11	FSM	ENSG00000188786.10	ENST00000373036.5	7937	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	2.4576411454889	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGTAGTATCTGTGGCAT	-37858552	True	NA	-6	True	ATTAAA	-35	NA	37859592	37809573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37815567_37817418_37817483_37822120_37822717_37823709_37823813_37832244_37832323_37835078_37835216_37835670_37835745_37838624_37838757_37839919_37840159_37857250_37857710_37859530
transcript_43830.known	chr14	-	574	4	FSM	ENSG00000125952.20	ENST00000555667.5	574	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	155.833957218002	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAATTAAATGGGTTG	-65093164	True	NA	NA	False	AATAAA	-8	NA	65102517	65077300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65077429_65077912_65078037_65093707_65093816_65102303
transcript_43832.known	chr14	-	897	4	FSM	ENSG00000125952.20	ENST00000246163.2	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	64.88108781113	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCAGCAGTACCTCTTTTT	-65093156	True	NA	NA	False	AATAAA	-19	NA	65102509	65083743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65084300_65093707_65093816_65101545_65101573_65102303
transcript_43834.known	chr14	-	327	2	FSM	ENSG00000125952.20	ENST00000554709.1	327	2	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTGAGAAAGCTGAGTA	-65093164	True	NA	NA	False	NA	NA	NA	65102517	65093702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65093816_65102303
transcript_43835.known	chr14	+	5166	11	FSM	ENSG00000033170.17	ENST00000360689.9	5166	11	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	16.4039629358274	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCAACTGAGCGGAGGTA	NA	False	NA	7	True	AATAAA	-16	NA	65410591	65744121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65411994_65455620_65455719_65561336_65561767_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_43836.known	chr14	+	2269	10	FSM	ENSG00000033170.17	ENST00000557164.5	2269	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.2487628560407	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTTATAAGGTTGTCTGT	65411316	True	NA	NA	False	NA	NA	NA	65411873	65742936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65411994_65455620_65455719_65615977_65616094_65616210_65616374_65629491_65629607_65669242_65669481_65721774_65722022_65724146_65724324_65733230_65733382_65742092
transcript_43837.known	chr14	+	496	3	FSM	ENSG00000033170.17	ENST00000549235.6	496	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAAAAAAAACAGG	65411333	True	NA	NA	False	NA	NA	NA	65411890	65458188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_65411994_65455620_65455719_65457893
transcript_43838.known	chr14	-	1521	1	FSM	ENSG00000276116.2	ENST00000621019.2	1521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATGCATGGATGCT	-65412586	False	NA	NA	False	AATAAA	-16	NA	65412690	65411169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_65411200_65412700
transcript_43839.known	chr14	-	960	1	FSM	ENSG00000224861.1	ENST00000445822.1	960	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	107	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAATGCCGGCTTACCATC	NA	False	NA	NA	False	GGGGCT	-4	NA	66013789	66012829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_66012800_66013800
transcript_43840.nnic	chr14	-	563	4	NNC	ENSG00000258561.2	novel	914	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTAAGTTTACCTT	-66507815	True	NA	-5	True	ATTAAA	-18	NA	66507850	66494643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_66494857_66496261_66496343_66505284_66505346_66507642
transcript_43841.nic	chr14	-	663	4	ISM	ENSG00000258561.2	ENST00000654014.1	4137	5	-202	229369	13	0	5prime_fragment	FALSE	canonical	0	0	junction_1	1.63299316185545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTAAGTTTACCTT	NA	False	NA	-5	True	ATTAAA	-18	NA	66509381	66494643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_66494857_66496261_66496343_66505284_66505346_66509073
transcript_43842.known	chr14	-	914	4	FSM	ENSG00000258561.2	ENST00000555377.2	914	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTATTAAGTTTACCTT	-66507814	True	NA	-5	True	ATTAAA	-18	NA	66507849	66494643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_66494857_66496261_66496343_66505284_66505346_66507290
transcript_43843.known	chr14	+	3557	23	FSM	ENSG00000171723.16	ENST00000478722.6	3557	23	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	9.20923000882114	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAATGTGTTGGCCTCGTT	66506489	True	NA	23	True	AATAAA	-27	NA	66508146	67181803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_66508592_66681106_66681186_66776463_66776522_66824473_66824567_66879938_66880034_66916002_66916070_66922665_66922939_66924193_66924293_66965190_66965326_67023632_67023676_67058648_67058787_67088982_67089076_67100855_67100912_67110139_67110260_67111860_67111920_67113017_67113172_67122255_67122378_67143361_67143450_67159414_67159489_67165161_67165227_67168932_67169037_67179577_67179675_67180803
transcript_43846.nic	chr14	+	1190	3	ISM	ENSG00000171723.16	ENST00000459628.5	1723	11	-27	281936	-27	-47461	5prime_fragment	FALSE	canonical	3	56	junction_2	8	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAGAGAAGAATCAAATA	66508094	False	NA	NA	False	AATAAA	-8	NA	66508110	66777093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_66508592_66681106_66681186_66776463
transcript_43847.known	chr14	+	404	2	FSM	ENSG00000171723.16	ENST00000556240.1	404	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTAAAAATGTAATGTG	NA	False	NA	12	True	AATAAA	-16	NA	67180848	67181792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67180880_67181419
transcript_43848.known	chr14	+	5468	15	FSM	ENSG00000072415.10	ENST00000261681.9	5468	15	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_10	9.13867091662945	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGAACTTGAAAGTTTTC	67240238	True	NA	NA	False	ATTAAA	-39	NA	67241434	67336061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67241534_67269700_67269784_67279017_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_43849.known	chr14	+	5006	15	FSM	ENSG00000072415.10	ENST00000555925.5	5006	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	19.3508160456517	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAATTTCTCTTGCTA	67240226	True	NA	25	True	AATAAA	-33	NA	67241422	67335819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67241534_67269700_67269784_67279249_67279538_67292510_67292720_67301388_67301467_67301971_67302119_67302409_67302572_67303521_67303600_67312526_67312711_67316831_67316904_67317407_67317480_67320229_67320398_67321056_67321260_67323701_67323813_67332779
transcript_4385.nic	chr1	-	805	2	ISM	ENSG00000188786.10	ENST00000373036.5	7937	11	-19	47412	-19	363	5prime_fragment	FALSE	canonical	3	13	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGACCCATGTTTCTGGTG	-37858571	True	NA	NA	False	AATAAA	-18	NA	37859611	37856985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_37857710_37859530
transcript_43856.known	chr14	-	1085	8	FSM	ENSG00000100554.12	ENST00000555431.5	1085	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	133.848223517443	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAACCTTGGCGCTGTTGTC	-67356342	True	NA	NA	False	NA	NA	NA	67359787	67338250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67359657
transcript_43858.known	chr14	+	2016	3	FSM	ENSG00000072415.10	ENST00000556345.6	2016	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	7.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCCTTCCTTCCCTC	67240226	True	NA	NA	False	NA	NA	NA	67241422	67280839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67241534_67269700_67269784_67279017
transcript_43859.known	chr14	-	1599	9	FSM	ENSG00000100554.12	ENST00000216442.12	1599	9	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_4	31.8345331362029	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGGCATTATAATACTTC	-67356359	True	NA	NA	False	AATAAA	-18	NA	67359804	67337871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67338763_67340439_67340519_67343371_67343439_67345767_67345872_67347408_67347454_67349036_67349105_67350610_67350691_67352922_67353041_67359657
transcript_4386.known	chr1	-	4450	24	FSM	ENSG00000204084.13	ENST00000373024.8	4450	24	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_17	84.1012082702394	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37946113	True	NA	-2	True	GATAAA	-17	NA	37947053	37860696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931912_37932054_37940687_37940799_37943639_37943670_37943795_37943894_37945755_37945851_37946251_37946335_37946989
transcript_43867.known	chr14	+	4154	8	FSM	ENSG00000134001.15	ENST00000256383.11	4154	8	0	0	0	0	multi-exon	FALSE	canonical	3	1185	junction_3	157.908524281675	5233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGATACAGACTTTTC	67347894	True	NA	16	True	AATAAA	-18	NA	67360327	67386516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67360457_67364766_67365009_67374467_67374548_67376438_67376591_67380658_67380766_67381592_67381691_67382446_67382591_67383314
transcript_4387.known	chr1	-	3905	18	FSM	ENSG00000204084.13	ENST00000373027.5	3905	18	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_10	18.6070269867918	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGTTGTGTATGTTTTTAT	-37928996	True	NA	-2	True	GATAAA	-17	NA	37931749	37860696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37862431_37864311_37864424_37865760_37865889_37866458_37866544_37868500_37868615_37872929_37873166_37873992_37874156_37875605_37875717_37878187_37878324_37880084_37880195_37882806_37882919_37885637_37885826_37886887_37887005_37887350_37887466_37888242_37888345_37889556_37889725_37891357_37891455_37931672
transcript_43877.known	chr14	+	527	3	FSM	ENSG00000134001.15	ENST00000556724.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	1269	junction_2	157	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTAATATTCTCAAATTAG	67347919	True	NA	NA	False	NA	NA	NA	67360352	67374648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67360457_67364766_67365009_67374467
transcript_43879.known	chr14	-	1513	9	FSM	ENSG00000100558.9	ENST00000216446.9	1513	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.68967934891875	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTCTCTTAACTTCTTT	-67412090	True	NA	1	True	AATAAA	-16	NA	67412165	67386983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67387457_67388223_67388303_67390662_67390747_67392325_67392428_67392661_67392850_67393149_67393242_67395401_67395584_67397661_67397827_67412017
transcript_43882.known	chr14	-	594	4	FSM	ENSG00000100564.9	ENST00000558001.1	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	42.4970587217516	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGAGATCCTGGCACAC	-67599018	True	NA	NA	False	NA	NA	NA	67600282	67590126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67590173_67592634_67592719_67593742_67593948_67600023
transcript_43884.known	chr14	-	583	3	FSM	ENSG00000100564.9	ENST00000558198.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTAAGCCATAGGGGCT	-67599001	True	NA	NA	False	NA	NA	NA	67600265	67590036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67590173_67593742_67593948_67600023
transcript_43886.known	chr14	+	1911	8	FSM	ENSG00000081181.8	ENST00000261783.4	1911	8	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_5	43.7264222181509	1113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGATTCTGAAATGTTGTTC	67617029	True	NA	10	True	AATAAA	-17	NA	67619919	67651708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67620089_67620893_67620967_67642185_67642364_67645642_67645803_67646643_67646739_67646920_67647026_67648046_67648184_67650714
transcript_43891.known	chr14	-	1103	7	FSM	ENSG00000100568.11	ENST00000216456.6	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	617.527237366004	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGCTGTGGGAGGAGGGA	-67665501	True	NA	-125	True	NA	NA	NA	67674610	67651263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67663028_67663191_67674374
transcript_43892.known	chr14	-	5142	6	FSM	ENSG00000100568.11	ENST00000554659.6	5142	6	0	0	0	0	multi-exon	FALSE	canonical	3	1173	junction_4	89.9497637573329	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTAAAAGTGTGTTGCC	-67665523	True	NA	NA	False	AGTAAA	-19	NA	67674632	67647084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67651482_67653436_67653499_67656415_67656590_67659730_67659923_67662476_67662536_67674374
transcript_43902.known	chr14	-	888	4	FSM	ENSG00000072042.13	ENST00000554731.1	888	4	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_3	507.133775907962	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCATATGACCTGCACAG	-67675258	True	NA	NA	False	NA	NA	NA	67695766	67678072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67695629
transcript_43908.known	chr14	-	2539	7	FSM	ENSG00000072042.13	ENST00000381346.9	2539	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	409.604450116885	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAAACACTGTTCATTA	-67675256	True	NA	-19	True	AATAAA	-34	NA	67695764	67676799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692933_67693053_67695629
transcript_43909.known	chr14	-	1926	7	FSM	ENSG00000072042.13	ENST00000553384.5	1926	7	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	256.054301966508	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCCTAAAAACAAACAAACAA	-67675246	True	NA	NA	False	NA	NA	NA	67695754	67677363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_67678424_67685014_67685205_67690211_67690422_67691139_67691245_67692437_67692594_67692972_67693053_67695629
transcript_43910.known	chr14	+	1878	9	FSM	ENSG00000139988.10	ENST00000551171.6	1878	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.77284706819664	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTTATTTATTTTCTCA	67701855	False	NA	9	True	AATAAA	-17	NA	67701885	67734451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67701936_67720847_67720903_67722423_67722711_67724472_67724592_67725098_67725255_67726050_67726156_67726980_67727191_67729190_67729381_67733745
transcript_43912.nic	chr14	-	541	3	ISM	ENSG00000072121.17	ENST00000557407.1	2819	12	-9	16542	-4	1667	5prime_fragment	FALSE	canonical	3	30	junction_2	11	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGGCTTAAATTTTTATT	-67814715	True	NA	NA	False	ATTAAA	-22	NA	67816594	67813861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_67814065_67815769_67816047_67816533
transcript_43913.nnic	chr14	+	859	2	NNC	ENSG00000139988.10	novel	1833	8	NA	NA	2171	-2	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTTATTTATTTTC	67729259	True	NA	6	True	AATAAA	-14	NA	67729334	67734448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_67729491_67733745
transcript_43915.known	chr14	+	922	7	FSM	ENSG00000182185.19	ENST00000390683.7	922	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	9.14087280053472	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAGTACAGTCTAATTGC	67818050	True	NA	NA	False	AATAAA	-35	NA	67819811	67887326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020
transcript_43918.nic	chr14	+	929	4	ISM	ENSG00000182185.19	ENST00000390683.7	922	7	-63	51623	-30	597	5prime_fragment	FALSE	canonical	3	68	junction_1	3.55902608401044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCCAGAAACCATTTAGC	67817987	True	NA	NA	False	AATAAA	-3	NA	67819748	67835703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079
transcript_43920.known	chr14	+	1536	11	FSM	ENSG00000182185.19	ENST00000471583.6	1559	11	29	-6	0	-2	multi-exon	FALSE	canonical	3	6	junction_10	18.4780951399218	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTAGGTGTAAAGGAATTG	67818046	True	NA	NA	False	AATAAA	-22	NA	67819807	68478099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68477647
transcript_43924.known	chr14	+	2596	11	FSM	ENSG00000182185.19	ENST00000487270.5	2596	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.0688813838739	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAAAATCAGGGGAAAAATA	67818046	True	NA	NA	False	NA	NA	NA	67819807	68595996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68594484
transcript_43925.known	chr14	+	1673	11	FSM	ENSG00000182185.19	ENST00000487861.5	1673	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	20.0688813838739	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGTACCATATAGAAATA	67818017	True	NA	NA	False	NA	NA	NA	67819778	68611565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_67819854_67823541_67823628_67825463_67825578_67835079_67835197_67865002_67865140_67885868_67885989_67887020_67887205_68291883_68291981_68411423_68411528_68468171_68468251_68611005
transcript_43926.known	chr14	-	279	2	FSM	ENSG00000259038.2	ENST00000556301.2	319	2	34	6	34	-6	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTCACGTAGCAATCTCAT	NA	False	NA	NA	False	GATAAA	-15	NA	68628445	68627165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68627351_68628351
transcript_43928.nnic	chr14	-	2203	4	NNC	ENSG00000185650.10	novel	3026	3	NA	NA	-567	0	at_least_one_novel_splicesite	FALSE	canonical	3	47	junction_2	590.90006675316	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-68793519	False	NA	75	True	AATAAA	-19	NA	68793634	68787661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_68788810_68789526_68789669_68790332_68790493_68792881
transcript_43932.known	chr14	-	3026	3	FSM	ENSG00000185650.10	ENST00000336440.3	3026	3	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	592	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAAGTAAGGGG	-68794621	False	NA	8	True	TTTAAA	-36	NA	68794736	68788604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68788810_68789526_68790493_68792881
transcript_43934.known	chr14	-	3017	2	FSM	ENSG00000185650.10	ENST00000439696.3	3017	2	0	0	0	0	multi-exon	FALSE	canonical	3	1360	junction_1	0	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGATGGTGGAGCTGGTT	-68766303	True	NA	75	True	AATAAA	-19	NA	68793067	68787661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68790493_68792881
transcript_43936.nnic	chr14	-	849	2	NNC	ENSG00000185650.10	novel	727	2	NA	NA	-234	-4550	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTTGGGGGTGGTGA	-68796372	False	NA	NA	False	AATAAA	-25	NA	68796487	68794738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_68795175_68796074
transcript_43937.known	chr14	-	3779	21	FSM	ENSG00000072110.16	ENST00000193403.10	3779	21	0	0	0	0	multi-exon	TRUE	canonical	3	996	junction_10	117.855674449727	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCACACTCCTATGACA	-68979424	False	NA	-26	True	ATTAAA	-1	NA	68979440	68874142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_68875018_68877081_68877241_68878988_68879070_68879961_68880109_68880809_68880990_68882457_68882593_68882872_68883056_68884167_68884309_68884774_68884884_68885424_68885576_68890138_68890287_68892052_68892284_68893654_68893748_68902476_68902563_68904654_68904737_68909317_68909397_68909954_68910043_68912155_68912243_68921005_68921126_68925557_68925673_68978951
transcript_4394.known	chr1	-	2774	17	FSM	ENSG00000183431.12	ENST00000373019.5	2774	17	0	0	0	0	multi-exon	FALSE	canonical	3	1391	junction_7	131.475981052624	1910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAATCTTTTTCTTTATA	-37968512	True	NA	-14	True	AATAAA	-18	NA	37990022	37956974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37958264_37960119_37960176_37968043_37968135_37969353_37969465_37969570_37969736_37976883_37976954_37978719_37978828_37978987_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37987572_37987679_37987783_37987837_37989547_37989596_37989869
transcript_43941.known	chr14	-	4803	9	FSM	ENSG00000139990.18	ENST00000554215.5	4803	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.7337639514349	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATCACTCAGTGTGTGTTT	-69152588	False	NA	-9	True	ATTAAA	-37	NA	69152599	69051854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152413
transcript_43942.known	chr14	-	5946	9	FSM	ENSG00000139990.18	ENST00000341516.10	5946	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.9032610497337	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACACCTCTCCTTTATTTCT	-69151579	True	NA	38	True	NA	NA	NA	69153119	69050880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69055612_69062383_69062512_69075344_69075412_69091673_69091888_69116365_69116496_69118138_69118279_69119193_69119231_69122216_69122361_69152764
transcript_43943.nic	chr14	+	3358	10	FSM	ENSG00000081177.19	ENST00000685843.1	5009	10	-9	1660	-9	0	multi-exon	FALSE	canonical	3	96	junction_1	25.4606935015574	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	NA	False	NA	17	True	AATAAA	-18	NA	69191488	69242358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69191592_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43944.known	chr14	+	2688	10	FSM	ENSG00000081177.19	ENST00000409949.5	2688	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	41.665629616724	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGGAGAAAAAGTTCTTCC	69190173	False	NA	NA	False	GGGGCT	-25	NA	69191765	69241517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69192040_69203916_69204001_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43946.known	chr14	+	2496	9	FSM	ENSG00000081177.19	ENST00000409242.5	2496	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.8677489319908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTCCTTGTCTAGTGC	69191054	True	NA	NA	False	NA	NA	NA	69191805	69241449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69192040_69209423_69209804_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_4395.known	chr1	-	776	8	FSM	ENSG00000183431.12	ENST00000461869.5	776	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_6	528.150256913268	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTAAGGAATAGTTTTTCT	-37968565	True	NA	NA	False	NA	NA	NA	37990075	37978989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37979056_37979464_37979534_37980585_37980725_37981728_37981812_37984168_37984261_37984706_37984780_37989547_37989596_37989869
transcript_43950.nic	chr14	+	1396	3	ISM	ENSG00000081177.19	ENST00000413191.1	1143	6	-59	20127	10	900	intron_retention	FALSE	canonical	3	41	junction_1	57	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTTACATGAGTTTTTT	69191024	True	NA	NA	False	AATAAA	-18	NA	69191775	69210471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_69192040_69203916_69204001_69209423
transcript_43951.nic	chr14	+	474	2	ISM	ENSG00000081177.19	ENST00000461908.5	579	4	-37	5312	10	-5312	5prime_fragment	FALSE	canonical	3	41	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATATGATTCTGTGTTTTG	69191024	True	NA	NA	False	ATTAAA	-17	NA	69191775	69204126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_69192040_69203916
transcript_43952.known	chr14	+	630	2	FSM	ENSG00000100626.17	ENST00000554858.1	630	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGGGCACTTTCTACT	NA	False	NA	NA	False	NA	NA	NA	69259276	69260337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69259747_69260177
transcript_43953.known	chr14	+	2828	8	FSM	ENSG00000081177.19	ENST00000409675.5	2828	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	60.6104995282272	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCACTGGATGTAAATGT	69189962	True	NA	17	True	AATAAA	-18	NA	69191554	69242358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69191592_69228815_69229073_69230471_69230599_69234699_69235032_69236045_69236153_69236406_69236543_69237574_69237932_69240883
transcript_43958.known	chr14	+	2377	8	FSM	ENSG00000029364.12	ENST00000555840.5	2377	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	43.0969481376061	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393739	False	NA	25	True	ATTAAA	-14	NA	69398737	69462381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362_69458730_69461696
transcript_43960.known	chr14	+	5399	7	FSM	ENSG00000029364.12	ENST00000336643.10	5399	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	15.2825245151302	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGGCTCATTACTTA	69393693	True	NA	34	True	ATTAAA	-23	NA	69398691	69462390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_43964.known	chr14	+	2065	7	FSM	ENSG00000029364.12	ENST00000556605.5	2065	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	41.1042036239063	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGTGGCTCATTACT	69393691	True	NA	32	True	ATTAAA	-21	NA	69398689	69462388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69442068_69442267_69453240_69453310_69454811_69454898_69455731_69455867_69461696
transcript_43970.known	chr14	+	5192	6	FSM	ENSG00000029364.12	ENST00000031146.8	5192	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	49.4246901861812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACCTTAATCTGAGTGGCT	69393693	True	NA	25	True	ATTAAA	-14	NA	69398691	69462381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69453240_69453310_69454811_69454898_69455731_69455867_69458362
transcript_4398.known	chr1	-	1091	6	FSM	ENSG00000183386.10	ENST00000477194.5	1091	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	44.9826633271086	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCACCTCTGGGACTCA	-38005596	False	NA	NA	False	NA	NA	NA	38005606	37997344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_37999256_37999433_38005438
transcript_43984.known	chr14	+	1763	3	FSM	ENSG00000029364.12	ENST00000554059.1	1763	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	63	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAGTCACTATTAATGTAC	69393709	True	NA	NA	False	NA	NA	NA	69398707	69429457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69399466_69424093_69424203_69428561
transcript_43985.known	chr14	-	668	3	FSM	ENSG00000100632.11	ENST00000216520.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	1244.5	6122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTATATTTTCTCCCTGAG	-69324721	True	NA	-19	True	AATAAA	-13	NA	69398271	69380134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69380641_69386962_69387084_69398230
transcript_43986.known	chr14	-	791	4	FSM	ENSG00000100632.11	ENST00000557016.6	791	4	0	0	0	0	multi-exon	FALSE	canonical	3	2505	junction_1	204.764905847332	26104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTCCCTGAGTGCTTTT	-69324749	True	NA	-12	True	AATAAA	-20	NA	69398299	69380127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69380641_69386962_69387084_69394824_69394913_69398230
transcript_43987.known	chr14	-	4182	2	FSM	ENSG00000267909.3	ENST00000599174.3	4182	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTGAAATGGCTGAT	-69574613	True	NA	NA	False	ATTAAA	-31	NA	69574871	69569798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69573651_69574541
transcript_43988.known	chr14	+	5390	6	FSM	ENSG00000100647.8	ENST00000342745.5	5390	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4.44522215417857	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGGAGATGTGATCCTT	69611043	True	NA	9	True	ATTAAA	-22	NA	69611595	69715144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69611829_69658512_69658714_69703394_69703593_69704603_69704743_69708676_69709105_69710953
transcript_43999.known	chr14	+	565	5	FSM	ENSG00000100650.16	ENST00000555349.5	565	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	716.448358222698	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATTAAATGTAATTTGGGG	69767926	False	NA	NA	False	TTTAAA	-36	NA	69767939	69769383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767988_69768137_69768283_69768603_69768675_69768797_69768897_69769181
transcript_44001.known	chr14	+	1638	8	FSM	ENSG00000100650.16	ENST00000394366.6	1638	8	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	525.176122061612	1281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTTATTGATAATAAAAT	69727479	True	NA	5	True	NA	NA	NA	69767092	69771973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_44002.known	chr14	+	3044	6	FSM	ENSG00000100650.16	ENST00000554465.5	3044	6	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_1	193.226913239331	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTTTGTCTGTTTGTCTG	69727479	True	NA	19	True	AATAAA	-14	NA	69767092	69772004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69770541_69770994_69771106_69771193
transcript_44003.known	chr14	+	2443	7	FSM	ENSG00000100650.16	ENST00000556184.5	2443	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	566.304810935673	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTGTATTAAATGTCTTT	69727558	True	NA	-12	True	NA	NA	NA	69767171	69771642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69770541_69770994_69771106_69771193
transcript_44004.known	chr14	+	2057	8	FSM	ENSG00000100650.16	ENST00000555547.5	2057	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	574.169675554649	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTTTTGATAAGCCTTC	69727572	True	NA	0	True	NA	NA	NA	69767185	69771654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767256_69768137_69768283_69768603_69768675_69768797_69768897_69769181_69769252_69769510_69770541_69770994_69771106_69771193
transcript_44005.known	chr14	+	1863	7	FSM	ENSG00000100650.16	ENST00000556587.5	1863	7	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	691.978082504545	2428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69727568	True	NA	20	True	AATAAA	-15	NA	69767181	69772005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767381_69768137_69768283_69768603_69768675_69768797_69769252_69770466_69770541_69770994_69771106_69771196
transcript_44006.known	chr14	+	644	4	FSM	ENSG00000100650.16	ENST00000556647.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	713.967475138438	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGTCTGTTTGTCTGA	69770434	False	NA	20	True	AATAAA	-15	NA	69770447	69772005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69770541_69770994_69771106_69771193_69771545_69771916
transcript_44007.known	chr14	+	1412	8	FSM	ENSG00000100650.16	ENST00000553635.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	632.569299260837	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACAGACACATTAGAGCA	69727543	True	NA	-19	True	NA	NA	NA	69767156	69771949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_69767252_69768137_69768283_69768612_69768675_69768797_69768897_69769181_69769252_69770466_69770541_69770994_69771106_69771193
transcript_44008.known	chr14	-	801	1	FSM	ENSG00000242071.3	ENST00000477943.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1412	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	-69885655	True	NA	NA	False	AAAAAG	-37	NA	69886140	69885339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_69885300_69886100
transcript_44010.nnic	chr14	-	666	3	Intergenic	novelGene_10	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGCTTTATAACTCCTCCT	NA	False	NA	NA	False	AATAAA	-24	NA	70252978	70238303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_-_70238663_70239527_70239706_70252849
transcript_44011.nnic	chr14	-	710	3	Intergenic	novelGene_11	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAACTAGCTTTATAACTCC	NA	False	NA	NA	False	AATAAA	-20	NA	70252978	70238307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_-_70238663_70239479_70239706_70252849
transcript_44016.known	chr14	-	929	6	FSM	ENSG00000258644.6	ENST00000621525.4	929	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	1154.53945796582	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACGTATTCCACTCTCCA	-70412376	True	NA	-27	True	AATAAA	-28	NA	70417074	70326063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70375675_70375772_70388469_70388607_70416899
transcript_44024.known	chr14	-	479	5	FSM	ENSG00000258644.6	ENST00000617124.4	479	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1024.48596866917	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTAAGACAACTTGAC	-70412286	True	NA	-40	True	AAGAAA	-13	NA	70416984	70326351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70375675_70375772_70388469_70388607_70416899
transcript_44034.known	chr14	+	1429	4	FSM	ENSG00000259033.2	ENST00000655620.1	1429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.49443825784929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTTTTTTTGTTTAAG	70255498	True	NA	5	True	AATAAA	-11	NA	70255632	70343388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70256190_70275295_70275361_70291476_70291567_70342671
transcript_44036.known	chr14	-	318	4	FSM	ENSG00000133983.16	ENST00000555276.5	318	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1155.41276895604	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAGACTAAGACAACTTGAC	-70412286	True	NA	-40	True	AAGAAA	-13	NA	70416984	70326351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70416899
transcript_4404.known	chr1	-	1468	5	FSM	ENSG00000183386.10	ENST00000485803.5	1468	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	75.8926050415981	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGGGCCTCCGTGTGTGT	-38003614	True	NA	-9	True	AATAAA	-14	NA	38005502	37996769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_37997560_37997683_37997871_37997962_37998133_37998973_37999149_38005356
transcript_44045.known	chr14	-	7057	4	FSM	ENSG00000213463.5	ENST00000256366.6	7057	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_2	15.9234278833282	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATCTTTTTTCACCTTATT	-70412392	True	NA	-17	True	AATAAA	-21	NA	70417090	70366498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70373132_70375675_70375772_70388469_70388607_70416899
transcript_44052.known	chr14	-	902	3	FSM	ENSG00000213463.5	ENST00000554216.1	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	60.5	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATACACATACGTATGCA	-70412363	True	NA	-72	True	AATACA	-1	NA	70417061	70372487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70373132_70375675_70375772_70416899
transcript_44060.known	chr14	-	1669	4	FSM	ENSG00000133983.16	ENST00000389912.7	1669	4	0	0	0	0	multi-exon	FALSE	canonical	3	2297	junction_3	72.6008876590975	5632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTAGTGATAATTTGTG	-70339999	True	NA	-10	True	AATAAA	-17	NA	70359683	70325080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70342657_70342730_70359518
transcript_44061.known	chr14	-	627	3	FSM	ENSG00000133983.16	ENST00000557612.5	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	1080	1394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	-70340016	True	NA	-31	True	AATAAA	-24	NA	70359700	70326067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70329173_70329237_70359518
transcript_44062.known	chr14	-	447	2	FSM	ENSG00000133983.16	ENST00000554366.5	447	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTCACGTATTCCACTC	-70328218	False	NA	-31	True	AATAAA	-24	NA	70328230	70326067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70326450_70328165
transcript_44068.known	chr14	-	975	9	FSM	ENSG00000133997.12	ENST00000554963.5	975	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.1089612847776	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGATTGTTGTACTTTG	-70596389	True	NA	-4	True	AATAAA	-16	NA	70600643	70581256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70581489_70584816_70584944_70585755_70585784_70591265_70591382_70592879_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_44069.known	chr14	-	862	5	FSM	ENSG00000133997.12	ENST00000556495.5	862	5	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_4	23.2217570394662	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	ACAAAAAAAAAAAAAAAAAA	-70596410	True	NA	NA	False	NA	NA	NA	70600664	70592510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70592989_70593295_70593379_70596610_70596703_70597617_70597778_70600615
transcript_44070.known	chr14	-	1093	4	FSM	ENSG00000133997.12	ENST00000554870.5	1093	4	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_3	15.7973274814304	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGTGGATCACCTGAGC	-70596401	True	NA	NA	False	NA	NA	NA	70600655	70592577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_70593379_70596610_70596703_70597617_70597778_70600615
transcript_44071.known	chr14	+	5094	3	FSM	ENSG00000133985.3	ENST00000256367.3	5094	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	6	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTCCTCTGTTGCCAGC	70639316	True	NA	20	True	CATAAA	-20	NA	70641915	70675366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70642536_70667563_70667747_70671075
transcript_44078.known	chr14	+	732	3	FSM	ENSG00000259153.3	ENST00000557691.2	732	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATTCCTAATCTTGTGAA	70809682	False	NA	NA	False	AATAAA	-31	NA	70809840	70815403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70809940_70810325_70810666_70815110
transcript_4408.known	chr1	+	2023	8	FSM	ENSG00000183520.12	ENST00000373014.5	2023	8	0	0	0	0	multi-exon	FALSE	canonical	3	819	junction_4	58.1567200040774	3005	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCATAGTGTTTTATCTAG	38003657	True	NA	20	True	AATAAA	-16	NA	38012733	38024820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38012866_38016358_38016421_38017667_38017771_38018463_38018578_38019058_38019153_38019252_38019384_38022698_38022810_38023544
transcript_44080.nic	chr14	+	693	3	NIC	ENSG00000259153.3	novel	732	3	NA	NA	-16	-7	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	24.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	70809716	False	NA	NA	False	AATAAA	-17	NA	70809874	70815389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_70809940_70810325_70810675_70815110
transcript_44081.nnic	chr14	+	586	3	FSM	ENSG00000259153.3	ENST00000554032.2	537	3	-54	5	5	-5	multi-exon	FALSE	canonical	1	4	junction_1	12	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	70809687	False	NA	NA	False	AATAAA	-19	NA	70809845	70815391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70809940_70810080_70810292_70815110
transcript_44084.nnic	chr14	+	1885	3	NNC	ENSG00000259153.3	novel	1019	2	NA	NA	20	54	intron_retention	FALSE	canonical	1	1	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAAATGTGTTGGGTGGA	70809702	False	NA	NA	False	AGTAAA	-19	NA	70809860	70816048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_70810675_70814226_70814360_70815110
transcript_44085.nnic	chr14	+	1180	3	NNC	ENSG00000259153.3	novel	537	3	NA	NA	0	-5	intron_retention	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	70809265	True	NA	NA	False	AATAAA	-19	NA	70809899	70815391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_70810666_70814226_70814360_70815110
transcript_4409.known	chr1	+	573	5	FSM	ENSG00000224592.5	ENST00000428151.1	573	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	2.27760839478607	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTGGGCTTCAGAGCAC	38047412	False	NA	NA	False	NA	NA	NA	38047424	38119025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38047615_38102416_38102497_38103545_38103662_38105631_38105753_38118959
transcript_44090.known	chr14	+	1659	2	FSM	ENSG00000259153.3	ENST00000661317.1	1659	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAGTATAATGATAA	70809732	False	NA	NA	False	AAAACA	-43	NA	70809890	70815994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70810666_70815110
transcript_44092.known	chr14	+	368	2	ISM	ENSG00000259153.3	ENST00000554032.2	537	3	305	5	263	-5	3prime_fragment	FALSE	canonical	3	28	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	70810180	False	NA	NA	False	AATAAA	-19	NA	70810204	70815391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_70810292_70815110
transcript_44093.known	chr14	+	963	2	FSM	ENSG00000259153.3	ENST00000653562.2	1019	2	49	7	49	-7	multi-exon	FALSE	canonical	3	49	junction_1	0	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTATATATATAATACATT	70809356	True	NA	NA	False	AATAAA	-17	NA	70809990	70815389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70810675_70815110
transcript_44094.nnic	chr14	+	927	2	NNC	ENSG00000259153.3	novel	537	3	NA	NA	0	-5	intron_retention	FALSE	canonical	2	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATATATAATACATTCC	70809265	True	NA	NA	False	AATAAA	-19	NA	70809899	70815391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_70810546_70815110
transcript_44097.known	chr14	+	284	2	FSM	ENSG00000275630.1	ENST00000622856.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGGCGTCTGATGATAGTT	70821883	True	NA	5	True	CATAAA	-23	NA	70822003	70823984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_70822123_70823819
transcript_44098.known	chr14	+	6539	21	FSM	ENSG00000197555.10	ENST00000358550.6	6539	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.6764833614197	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTGAATGTCTTTATT	NA	False	NA	13	True	AATAAA	-34	NA	71586280	71739401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_71586929_71587570_71589371_71618756_71618888_71624047_71624237_71650334_71650510_71658332_71658437_71661309_71661468_71671118_71671693_71672347_71672623_71685361_71685632_71698980_71699128_71702380_71702506_71705221_71705341_71709221_71709665_71723646_71723887_71724669_71724836_71730054_71730302_71733665_71733813_71735276_71735392_71738243_71738326_71739017
transcript_4411.known	chr1	+	441	2	FSM	ENSG00000228436.4	ENST00000456813.2	501	2	58	2	58	-2	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGCTGGTTGCTTTACT	38859934	False	NA	NA	False	AATATA	-16	NA	38860082	38876224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38860240_38875940
transcript_44113.nnic	chr14	+	1492	5	NIC	ENSG00000266869.2	novel	397	2	NA	NA	-106	437	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	4.32290411644765	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGCTCCCTTTCCA	71848269	True	NA	NA	False	AATAAA	-22	NA	71848499	71929033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_71848737_71908164_71908435_71910573_71910653_71915875_71916031_71928282
transcript_44117.nnic	chr14	+	1413	4	NIC	ENSG00000266869.2	novel	397	2	NA	NA	-106	437	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	4.10960933531265	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGCTCCCTTTCCA	71848269	True	NA	NA	False	AATAAA	-22	NA	71848499	71929033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_71848737_71908164_71908435_71915875_71916031_71928282
transcript_4412.known	chr1	+	675	3	FSM	ENSG00000228436.4	ENST00000663032.2	770	3	0	95	0	35	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCCAGATGACTGAGATTA	38859763	True	NA	NA	False	AATAAA	-26	NA	38859911	38919431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38860240_38913539_38913629_38919173
transcript_44122.nnic	chr14	+	896	3	NNC	ENSG00000266869.2	novel	397	2	NA	NA	-106	4578	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	6.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTTAGTCATGTATTCT	71848269	True	NA	NA	False	AATAAA	-19	NA	71848499	71913847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_71848737_71908164_71908435_71913458
transcript_44124.nnic	chr14	+	1180	3	NIC	ENSG00000266869.2	novel	397	2	NA	NA	-28	437	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAAGAGCTCCCTTTCCA	71848347	True	NA	NA	False	AATAAA	-22	NA	71848577	71929033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_71848737_71908164_71908435_71928282
transcript_44133.nic	chr14	+	2621	14	NIC	ENSG00000119599.17	novel	2374	14	NA	NA	-116	0	intron_retention	FALSE	canonical	3	31	junction_9	12.7872902876023	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	NA	False	NA	11	True	AATAAA	-12	NA	72926260	72959644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_44134.known	chr14	+	2474	14	FSM	ENSG00000119599.17	ENST00000358377.7	2474	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	11.800611758287	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGACCAGCTTTCATAGCCT	72924417	True	NA	70	True	NA	NA	NA	72926463	72959703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954163_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_44135.known	chr14	+	1872	14	FSM	ENSG00000119599.17	ENST00000509320.5	1872	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.7906914082118	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAAAACGAAAAGCTTCT	72924404	True	NA	NA	False	AAAAAG	-24	NA	72926450	72959121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940251_72940378_72941744_72941825_72942993_72943097_72945887_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_44139.known	chr14	+	1521	12	FSM	ENSG00000119599.17	ENST00000509153.5	1521	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.1745086515263	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTTCCGTGTGGAGATGC	72924433	True	NA	NA	False	NA	NA	NA	72926479	72958946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954484_72955522_72955697_72956385_72956501_72958611
transcript_44143.nic	chr14	+	966	7	ISM	ENSG00000119599.17	ENST00000555042.5	2374	14	-12	13406	-3	209	5prime_fragment	FALSE	canonical	3	50	junction_6	10.770329614269	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATTATTTGAGTGTG	72924428	True	NA	NA	False	NA	NA	NA	72926474	72946238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883
transcript_44145.known	chr14	-	319	1	FSM	ENSG00000176043.5	ENST00000488095.1	319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTT	NA	False	NA	NA	False	AAGAAA	-7	NA	72929930	72929611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_72929600_72929900
transcript_44146.known	chr14	+	2374	14	FSM	ENSG00000119599.17	ENST00000555042.5	2374	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.5227965011699	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCATGGTGTGACATGCAC	72924440	True	NA	11	True	AATAAA	-12	NA	72926486	72959644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_72926544_72937970_72938071_72939801_72939903_72940219_72940378_72941744_72941825_72942993_72943097_72945883_72946028_72947141_72947192_72951797_72951878_72954160_72954263_72954385_72954463_72955522_72955697_72956385_72956501_72958611
transcript_44147.known	chr14	-	4380	12	FSM	ENSG00000165861.14	ENST00000556143.6	4380	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_10	9.78360916351746	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGACTGTGCTGGCTCTT	-73026134	True	NA	-11	True	CATAAA	-15	NA	73027106	72969450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_72971115_72974079_72974194_72974778_72974960_72975550_72975722_72977926_72978045_72978136_72978235_72978860_72978970_72981788_72981896_72993142_72993358_72997810_72998316_73024025_73024943_73026925
transcript_44153.known	chr14	+	6813	19	FSM	ENSG00000119707.14	ENST00000261973.12	6813	19	0	0	0	0	multi-exon	TRUE	canonical	3	228	junction_9	132.262178836647	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGAGTCTGTCTACTTT	73050981	True	NA	28	True	AATAAA	-38	NA	73058533	73123899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73103191_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111156_73111527_73111803_73112151_73112251_73114285_73114334_73119712
transcript_44154.known	chr14	+	6848	17	FSM	ENSG00000119707.14	ENST00000532683.5	6848	17	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_6	129.428491357197	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGCAGAATTGCACTTAA	73050989	True	NA	15	True	ATTAAA	-16	NA	73058541	73120129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73103479_73105858_73106082_73106195_73106286_73107825_73107900_73109341_73109493_73110830_73111803_73112151_73112251_73114285_73114334_73119712
transcript_44155.known	chr14	+	2470	9	FSM	ENSG00000119707.14	ENST00000525321.5	2470	9	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_6	42.3844016119138	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	73050994	True	NA	NA	False	AATAAA	-20	NA	73058546	73101179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666
transcript_44156.known	chr14	+	1567	11	FSM	ENSG00000119707.14	ENST00000526754.5	1567	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	126.835326309353	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAAACAGTTGTTTTTTAT	73050996	True	NA	NA	False	AATAAA	-20	NA	73058548	73101179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73058706_73071626_73071748_73076318_73076369_73077368_73077537_73083493_73083552_73088000_73088162_73096914_73097101_73099379_73099434_73099666_73099751_73100300_73100363_73100713
transcript_4416.known	chr1	-	2681	7	FSM	ENSG00000116954.8	ENST00000373001.4	2681	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_6	9.72967967955095	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCGTTTCTCCTTGCCTG	-38858483	True	NA	-2	True	AATAAA	-17	NA	38859772	38838197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38839705_38845938_38846088_38851614_38851758_38852373_38852489_38855707_38855908_38856878_38857083_38859409
transcript_44161.known	chr14	+	2776	12	FSM	ENSG00000080815.19	ENST00000357710.8	2776	12	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_3	32.4218067621009	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	73131744	True	NA	12	True	ATTAAA	-25	NA	73136446	73220401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_44162.known	chr14	+	6018	12	FSM	ENSG00000080815.19	ENST00000324501.10	6018	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	44.2225775327079	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCTAGTGTTTTTTAC	73131804	True	NA	7	True	AATAAA	-16	NA	73136506	73223691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_44165.known	chr14	+	712	5	FSM	ENSG00000080815.19	ENST00000553719.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	102.142975774157	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTGTATAAATACAGGTG	73131741	True	NA	NA	False	NA	NA	NA	73136443	73173680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136580_73147794_73147877_73147966_73148095_73170796_73171048_73173565
transcript_44166.known	chr14	+	1249	5	FSM	ENSG00000080815.19	ENST00000394157.7	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	62.4794966368968	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCACAATCTAAGTGGGTT	73131744	True	NA	NA	False	AATAAA	-14	NA	73136446	73174204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73136584_73147794_73147877_73147966_73148107_73170796_73171048_73173565
transcript_44170.known	chr14	+	3046	12	FSM	ENSG00000080815.19	ENST00000394164.5	3046	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	80.1930521917872	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTGTCCTGGTATTTT	73136787	False	NA	12	True	ATTAAA	-25	NA	73136816	73220401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73137224_73147794_73147877_73147966_73148095_73170796_73171048_73173565_73173708_73186852_73186921_73192643_73192865_73198030_73198130_73206385_73206473_73211768_73211943_73217125_73217245_73219133
transcript_44171.known	chr14	-	3050	2	FSM	ENSG00000258376.2	ENST00000554614.2	3050	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGATCAAGTTTCTATTT	-73245841	True	NA	NA	False	AATGAA	-18	NA	73245979	73242650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73245245_73245523
transcript_44172.known	chr14	-	3604	13	FSM	ENSG00000133961.21	ENST00000555238.6	3604	13	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	65.147428959246	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452301	True	NA	-13	True	AATAAA	-15	NA	73458546	73275215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44175.known	chr14	-	3547	12	FSM	ENSG00000133961.21	ENST00000557597.5	3547	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	78.5552392895261	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTTGCCCATGAAGGGCT	-73452277	True	NA	-13	True	AATAAA	-15	NA	73458522	73275215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73279280_73279425_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44179.known	chr14	-	3037	12	FSM	ENSG00000133961.21	ENST00000555394.5	3037	12	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	60.5427244811737	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGAATTCTAATGTCAT	-73452335	True	NA	1	True	AATAAA	-33	NA	73458580	73275672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44190.known	chr14	-	3607	11	FSM	ENSG00000133961.21	ENST00000554546.5	3607	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_6	76.6456782865153	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAGTGACTAGAAAAATAC	NA	False	NA	96	True	NA	NA	NA	73458617	73275106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73277294_73282358_73282506_73284080_73284375_73287109_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44197.nic	chr14	-	1875	9	ISM	ENSG00000133961.21	ENST00000555394.5	3037	12	-15	10552	-15	0	5prime_fragment	FALSE	canonical	3	202	junction_6	56.1146983864299	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	-73452350	True	NA	NA	False	NA	NA	NA	73458595	73286224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_73287315_73292733_73292875_73297210_73297286_73316389_73316423_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44201.nic	chr14	-	1842	8	ISM	ENSG00000133961.21	ENST00000557597.5	3547	12	-73	11009	-15	0	5prime_fragment	FALSE	canonical	3	99	junction_3	79.8335002057535	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	TAAAAAAAAAAAAAAAAAAA	-73452350	True	NA	NA	False	NA	NA	NA	73458595	73286224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44207.known	chr14	-	1740	7	FSM	ENSG00000133961.21	ENST00000554315.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	96.0115733764541	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGCCATATTTGGTGGTG	-73452301	True	NA	NA	False	NA	NA	NA	73458546	73286192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73287315_73292733_73292875_73297210_73297286_73323129_73323205_73355625_73355767_73409936_73410069_73458492
transcript_44211.known	chr14	-	847	5	FSM	ENSG00000133961.21	ENST00000557774.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	69.6527099257452	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGGTATAAATTATTAG	-73452332	True	NA	NA	False	AATAAA	-41	NA	73458577	73322800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73323205_73355625_73355767_73366896_73366982_73409936_73410069_73458492
transcript_44213.nnic	chr14	-	670	3	NNC	ENSG00000133961.21	novel	751	3	NA	NA	-15	236	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	130	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTTTCTTTCTTTCTTT	-73452350	True	NA	NA	False	AATAAA	-18	NA	73458595	73408913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_73409349_73409936_73410069_73458492
transcript_44218.nnic	chr14	-	1445	3	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	1	-7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	2	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTCTCACTCTGTCGCC	-73634311	True	NA	NA	False	ATTAAA	-17	NA	73634435	73616690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_73617211_73619666_73619817_73633660
transcript_44222.nnic	chr14	-	787	2	NNC	ENSG00000258603.5	novel	1303	2	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGTCGCCCAGGCTG	-73633857	False	NA	NA	False	ATTAAA	-24	NA	73633981	73616683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_73617211_73633721
transcript_44223.known	chr14	-	629	2	FSM	ENSG00000258603.5	ENST00000555011.3	1303	2	658	16	-56	-16	multi-exon	FALSE	canonical	2	2	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTTGACAGTCTCAC	-73633654	False	124	NA	False	ATTAAA	-8	NA	73633778	73616699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73617211_73633660
transcript_44229.known	chr14	+	632	9	FSM	ENSG00000119661.15	ENST00000554871.5	632	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.5315901642215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCACGCTTTCCACTGTGT	73643779	True	NA	NA	False	ATTAAA	-25	NA	73645026	73695942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73653169_73653216_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_44233.known	chr14	+	8417	8	FSM	ENSG00000119661.15	ENST00000553645.7	8417	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	12.328828005938	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	73643738	True	NA	11	True	AATAAA	-22	NA	73644985	73703732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73654846_73654886_73658846_73658957_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_44240.known	chr14	+	2312	7	FSM	ENSG00000119661.15	ENST00000311089.7	2312	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	22.5788740984921	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAGGAAAACTTGGTC	73643761	True	NA	NA	False	AATAGA	-34	NA	73645008	73697760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73654846_73654886_73661986_73662043_73671541_73671598_73687258_73687386_73689374_73689516_73695901
transcript_44250.known	chr14	+	548	4	FSM	ENSG00000119661.15	ENST00000554339.5	548	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.3185612575358	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACCACAAATTTTCGATT	73643770	True	NA	NA	False	NA	NA	NA	73645017	73696156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73645043_73687258_73687386_73689374_73689516_73695901
transcript_44253.known	chr14	-	2602	1	FSM	ENSG00000176903.5	ENST00000316836.5	2602	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTTCTCATTTTTCT	-73712655	True	NA	-3	True	ATTAAA	-16	NA	73714384	73711782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73711800_73714400
transcript_44254.known	chr14	+	656	3	FSM	ENSG00000259065.2	ENST00000556194.2	656	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTTGATTTAACAAATAC	73787337	True	NA	NA	False	AAAACA	-40	NA	73787359	73803300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73787510_73789026_73789117_73802884
transcript_44259.known	chr14	-	5261	16	FSM	ENSG00000187097.13	ENST00000334696.11	5261	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	9.58795540711829	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTAAGTCTTCCTTCGAAG	-74018510	True	NA	-3	True	AATAAA	-19	NA	74019288	73963229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73967015_73970009_73970126_73971851_73971909_73972883_73973025_73973876_73973979_73974923_73974986_73975935_73976016_73976323_73976413_73977023_73977060_73977298_73977375_73983017_73983162_73986813_73986894_73987885_73988173_74011090_74011151_74015823_74015931_74019249
transcript_4426.known	chr1	-	2532	5	FSM	ENSG00000214114.9	ENST00000397572.5	2532	5	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_2	21.4184499906039	2051	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTTGCAAACTGTAAAG	-38868844	True	NA	NA	False	ATTAAA	-17	NA	38873348	38862492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38864715_38866879_38867010_38867561_38867611_38873017_38873091_38873290
transcript_44269.known	chr14	+	2623	12	FSM	ENSG00000119725.21	ENST00000555044.6	2623	12	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	28.7163385405165	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAGATAGTTTTTTTAAAA	73884241	True	NA	NA	False	AATAAA	-25	NA	73886858	73932521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_4427.known	chr1	-	1883	8	FSM	ENSG00000158315.11	ENST00000372990.6	1883	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.57790871674104	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTCCTGATAATCA	-38941745	True	NA	NA	False	AATAAA	-16	NA	38941830	38885806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_38886684_38887962_38888025_38893163_38893225_38895968_38896070_38911321_38911435_38915561_38915711_38918966_38919338_38941681
transcript_44273.known	chr14	+	1961	12	FSM	ENSG00000119725.21	ENST00000556396.5	1961	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	49.5108302702508	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTCTTCATTCTGACTGT	73886754	False	NA	NA	False	NA	NA	NA	73886807	73931840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896347_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_44275.known	chr14	+	1608	12	FSM	ENSG00000119723.17	ENST00000394026.8	1608	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	27.5824833622673	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	73949898	True	NA	NA	False	AATAAA	-14	NA	73949925	73963108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950181_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_44278.known	chr14	+	2109	12	FSM	ENSG00000119723.17	ENST00000334571.7	2109	12	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	8.65500380757229	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATGTTTGGTGGCAGA	73949177	True	NA	NA	False	NA	NA	NA	73950301	73963670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_44280.known	chr14	-	5462	12	FSM	ENSG00000119711.13	ENST00000553458.6	5462	12	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_3	11.3814405978613	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTCTTTTTGTATTTTA	-74080744	True	NA	NA	False	AATGAA	-27	NA	74084453	74056846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74060747_74064821_74064921_74065180_74065361_74066704_74066887_74067379_74067570_74068859_74068982_74071194_74071498_74071895_74071975_74072202_74072365_74072536_74072612_74074954_74075018_74084346
transcript_44289.known	chr14	+	2293	11	FSM	ENSG00000119725.21	ENST00000324593.10	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_9	40.1327796196575	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	73886751	False	NA	11	True	AATAAA	-17	NA	73886804	73932278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73923394_73923523_73931502
transcript_44295.known	chr14	+	1722	11	FSM	ENSG00000119725.21	ENST00000540593.5	1722	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.8328081431057	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAACAGGATGCCTTAGCC	73886599	True	NA	NA	False	NA	NA	NA	73886616	73931597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73898070_73898263_73903959_73904111_73904901_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73931502
transcript_44296.known	chr14	+	1486	11	FSM	ENSG00000119723.17	ENST00000554341.6	1486	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	42.9785993257109	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTCAAGATCTTATTTA	73949912	True	NA	NA	False	AAAAAG	-28	NA	73949939	73963065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950181_73953434_73953570_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962975
transcript_44304.known	chr14	+	1538	11	FSM	ENSG00000119723.17	ENST00000629426.2	1538	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	28.1673569935129	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAATTCTCTTTTTCTTCTT	73949127	True	NA	NA	False	AATAAA	-14	NA	73950251	73963108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955804_73955929_73958146_73958278_73958970_73959079_73959161_73959225_73959414_73959523_73961172_73961376_73961454_73961571_73961736_73961904_73962969
transcript_4431.known	chr1	+	2688	5	FSM	ENSG00000174574.16	ENST00000432648.8	2688	5	0	0	0	0	multi-exon	FALSE	canonical	3	2179	junction_2	102.196807680084	435	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAAGGGTGATTTGTTTC	38948954	True	NA	44	True	ATTAAA	-19	NA	38991275	39006059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_38991601_38998170_38998312_39000971_39001107_39003346_39003419_39004044
transcript_44310.known	chr14	+	2765	10	FSM	ENSG00000140043.12	ENST00000555661.6	2765	10	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	23.5282861023403	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGCATCTTATACTCTGC	73848821	True	NA	NA	False	AGTAAA	-15	NA	73851830	73885726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73851944_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_44315.known	chr14	+	2543	10	FSM	ENSG00000140043.12	ENST00000555228.5	2543	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	46.2147429846343	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGAATGTTTTGGCTT	73848834	True	NA	4	True	AGTAAA	-14	NA	73851843	73885456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73852005_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_44318.known	chr14	+	2559	10	FSM	ENSG00000140043.12	ENST00000267568.8	2559	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	54.9702500909513	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGTTTTGGCTTATG	73848937	True	NA	7	True	AGTAAA	-17	NA	73851946	73885459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73852121_73858815_73858900_73860538_73860658_73874022_73874215_73876997_73877169_73879095_73879306_73880054_73880177_73881204_73881293_73882398_73882439_73884100
transcript_44355.known	chr14	+	558	5	FSM	ENSG00000119723.17	ENST00000555552.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	42.2218841360733	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGGTTCCAGTTTCTCCA	73949185	True	NA	NA	False	NA	NA	NA	73950309	73956482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73956428
transcript_44356.known	chr14	+	649	5	FSM	ENSG00000119723.17	ENST00000554920.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	41.3604581696093	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTTTTCTTCTTTGCT	73949183	True	NA	NA	False	AATAAA	-18	NA	73950307	73963112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804_73955929_73962969
transcript_44380.known	chr14	+	576	4	FSM	ENSG00000119723.17	ENST00000554193.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	4.96655480858378	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTACAATATTCAGTGTC	73949185	True	NA	NA	False	AAGAAA	-7	NA	73950309	73956000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73950496_73953434_73953570_73955450_73955510_73955804
transcript_44382.known	chr14	+	550	4	FSM	ENSG00000119636.16	ENST00000463558.3	550	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTAGTCCTTGTTTTCTC	74019354	False	NA	NA	False	AATAAA	-19	NA	74019447	74040817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74019535_74029183_74029250_74034027_74034172_74040564
transcript_44383.known	chr14	-	452	4	FSM	ENSG00000187097.13	ENST00000557681.1	452	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	14.613540144522	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGTATTTGTTGATAAC	-74018493	True	NA	NA	False	CATAAA	-24	NA	74019271	74008929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74009193_74011090_74011151_74015823_74015931_74019249
transcript_44386.known	chr14	-	164	1	FSM	ENSG00000273711.2	ENST00000613926.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCAGTAGTTCCTGAACAT	-73885442	False	NA	NA	False	AATAAA	-17	NA	73885555	73885391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73885400_73885600
transcript_44387.known	chr14	-	691	4	FSM	ENSG00000187097.13	ENST00000555829.5	691	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	14.4299072146089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTAGGCTAATGCTACCCA	NA	False	NA	NA	False	AATAAA	-22	NA	73972934	73961083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_73961551_73970009_73970126_73971851_73971909_73972883
transcript_44388.known	chr14	+	2461	13	FSM	ENSG00000119725.21	ENST00000398139.7	2461	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	66.3393527419602	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGGCTCTTGTTTTA	73884253	True	NA	11	True	AATAAA	-17	NA	73886870	73932278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_73886916_73892026_73892209_73893796_73893933_73896315_73896535_73898070_73898263_73903959_73904111_73904930_73905084_73909340_73909431_73920979_73921106_73922065_73922207_73923394_73923523_73927106_73927229_73931502
transcript_44389.known	chr14	+	3113	12	FSM	ENSG00000119636.16	ENST00000394009.5	3113	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.02055552462662	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTTGTCACTTTCAAT	74019255	True	NA	NA	False	AATAAA	-15	NA	74019348	74066092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74019535_74022915_74023145_74029183_74029250_74034027_74034172_74040564_74040646_74046059_74046131_74047929_74048075_74049701_74050196_74055583_74055686_74056905_74056981_74057143_74057259_74064687
transcript_44391.nnic	chr14	+	638	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	0	4820	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_5	48.5740671552218	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGGCTTTATCTCTTTGT	74081929	True	NA	NA	False	AATAAA	-21	NA	74084955	74102680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74102344
transcript_44395.known	chr14	+	585	6	FSM	ENSG00000205659.12	ENST00000554076.5	585	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	48.9514044742334	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAGGAAAGATACACAC	74081936	True	NA	NA	False	ATTAAA	-22	NA	74084962	74114295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74114005
transcript_44396.nnic	chr14	+	630	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-37	4001	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_5	48.9514044742334	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAATTCAATCTGATTCA	74081892	True	NA	NA	False	AATAAA	-19	NA	74084918	74118296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74118005
transcript_44397.nnic	chr14	+	875	6	NNC	ENSG00000205659.12	novel	2874	6	NA	NA	-13	14358	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	49.3290989173733	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTGTGGCTGGGTGCAGTG	74081916	True	NA	NA	False	AGTAAA	-17	NA	74084942	74128653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74128093
transcript_44398.known	chr14	+	1798	6	FSM	ENSG00000205659.12	ENST00000555028.7	2874	6	-3	1079	-3	-24	multi-exon	FALSE	canonical	3	93	junction_1	16.2406896405294	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	74081926	True	NA	NA	False	NA	NA	NA	74084952	74200414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74084994_74091231_74091307_74095947_74095986_74097793_74097861_74101154_74101239_74198921
transcript_44403.known	chr14	-	3035	19	FSM	ENSG00000119688.21	ENST00000356924.9	3035	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_17	75.2898104364432	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTTTCTCACTGTAAA	-74297940	True	NA	NA	False	AATAAA	-22	NA	74302934	74285268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74299547_74299676_74300149_74300269_74302874
transcript_44406.known	chr14	-	1842	18	FSM	ENSG00000119688.21	ENST00000553486.5	1842	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_16	68.737804832194	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATGGGTCCTGTGCAG	-74297951	True	NA	NA	False	NA	NA	NA	74302945	74286344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_44415.nnic	chr14	-	2113	17	NIC	ENSG00000119688.21	novel	1842	18	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	44	junction_16	76.1934216320543	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTACAGCTTTCTGTCTT	-74297992	True	NA	-31	True	ATTAAA	-3	NA	74302986	74285995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_74286530_74286700_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74302874
transcript_44427.known	chr14	-	2336	17	FSM	ENSG00000119688.21	ENST00000481935.5	2336	17	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_15	70.4787201926936	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGTTAAACATTAAAAAGA	-74297943	True	NA	31	True	NA	NA	NA	74302937	74286013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74286817_74287809_74287887_74288206_74288260_74288715_74288766_74289482_74289520_74290026_74290119_74290290_74290500_74292286_74292377_74292550_74292643_74292747_74292870_74293153_74293249_74295147_74295199_74295853_74295980_74296332_74296450_74297929_74298070_74300149_74300269_74302874
transcript_44470.nnic	chr14	-	945	2	NIC	ENSG00000119688.21	novel	1770	16	NA	NA	3	25	intron_retention	FALSE	canonical	2	36	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGAATGATCTTTTTTA	-74297979	True	NA	-6	True	ATTAAA	-28	NA	74302973	74285970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_74286817_74302874
transcript_44473.nnic	chr14	-	709	3	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	2.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTTTCTCACTTGCTT	NA	False	NA	93	True	NA	NA	NA	74349906	74325356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_74325763_74326060_74326221_74349763
transcript_44475.nnic	chr14	-	588	3	Antisense	novelGene_ENSG00000133980.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTTACTTCTAGTTTT	NA	False	NA	-28	True	CATAAA	-21	NA	74349906	74325477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_74325763_74326060_74326221_74349763
transcript_44477.known	chr14	+	3408	2	FSM	ENSG00000133980.5	ENST00000256362.5	3408	2	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_1	0	687	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTGGTCTCTGGTATTT	74336707	True	NA	25	True	AATAAA	-18	NA	74348470	74360008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74348653_74356782
transcript_44479.known	chr14	-	431	1	FSM	ENSG00000270000.1	ENST00000602790.1	431	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATCTGAGATTTTAAATA	-74472338	False	NA	NA	False	AATAAA	-20	NA	74472360	74471929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74471900_74472400
transcript_4449.known	chr1	+	495	3	FSM	ENSG00000168653.11	ENST00000372969.8	495	3	0	0	0	0	multi-exon	FALSE	canonical	3	2012	junction_1	2337	106953	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTATTTTCTCTTGG	38898454	True	NA	21	True	AATAAA	-17	NA	39026349	39034615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39026403_39028722_39028941_39034391
transcript_44494.known	chr14	-	699	5	FSM	ENSG00000119655.11	ENST00000556009.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	671.766700573942	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGTCTCTTTTTCTGTCT	-74494136	True	NA	-92	True	NA	NA	NA	74494177	74480095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74480289_74480701_74480780_74484414_74484588_74486328_74486437_74494030
transcript_4450.known	chr1	+	792	4	FSM	ENSG00000127603.32	ENST00000467673.5	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTCAAAATGAAGATGAAAAA	39102141	False	NA	NA	False	GATAAA	-33	NA	39105428	39254648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39105718_39231181_39231244_39250013_39250104_39254297
transcript_44506.known	chr14	+	2581	4	FSM	ENSG00000165898.14	ENST00000556816.6	2581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	419.154970015732	7938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TCTCAAAAAAAAAAAAAAAA	74480358	True	NA	NA	False	NA	NA	NA	74493764	74497106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74493846_74494049_74494153_74494274_74494391_74494825
transcript_44516.known	chr14	+	925	3	FSM	ENSG00000165898.14	ENST00000555139.1	925	3	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	52.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTCACCAGTTGTACCAA	74480365	True	NA	NA	False	NA	NA	NA	74493771	74495022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74493846_74494049_74494153_74494274
transcript_44518.known	chr14	+	489	3	FSM	ENSG00000165898.14	ENST00000554924.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	1	74	junction_2	379	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGCCACTATTATTTT	74480358	True	NA	NA	False	NA	NA	NA	74493764	74495130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74493846_74494049_74494153_74494825
transcript_44524.known	chr14	-	583	4	FSM	ENSG00000119655.11	ENST00000554482.1	583	4	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	679.861423788374	1833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGCTGTGGTCTTCT	-74493201	False	NA	-7	True	AATAAA	-27	NA	74493242	74479941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74480289_74480701_74480780_74486328_74486437_74493192
transcript_44525.known	chr14	-	729	5	FSM	ENSG00000119655.11	ENST00000553490.5	729	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	668.471016574391	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTAGGTGGTTTCATT	-74474971	True	NA	-78	True	NA	NA	NA	74493339	74480081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74480289_74480685_74480780_74484414_74484588_74486328_74486437_74493192
transcript_44526.known	chr14	-	5417	20	FSM	ENSG00000119682.18	ENST00000356357.9	5417	20	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_13	12.37525007442	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGGAGTGAGTGGCTGCT	-74711805	True	NA	-6	True	AATAAA	-13	NA	74713080	74661255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74663823_74663898_74664075_74664835_74664926_74667318_74667378_74667464_74667595_74669648_74669775_74669946_74670127_74670761_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_44527.known	chr14	-	2196	13	FSM	ENSG00000119682.18	ENST00000469797.5	2196	13	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	5.13701166914081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTAAAATATAAGCTAA	-74711792	True	NA	NA	False	NA	NA	NA	74713067	74670641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74670872_74671407_74671484_74672830_74672953_74673076_74673219_74674033_74674112_74675698_74675947_74676140_74676322_74676582_74676753_74683295_74683534_74684453_74684681_74685599_74685661_74692040_74692329_74712932
transcript_4453.known	chr1	-	2082	16	FSM	ENSG00000090621.15	ENST00000678625.1	2082	16	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	167.22139682336	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	-39575773	False	NA	3	True	NA	NA	NA	39575786	39560856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_44537.nnic	chr14	+	1701	9	NNC	ENSG00000119616.11	novel	4341	8	NA	NA	0	1387	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	72.0312432212578	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTTGCGTCTTTTTAG	74705752	True	NA	5	True	AATAAA	-4	NA	74713143	74736691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881_74735604_74736373
transcript_44547.known	chr14	+	794	8	FSM	ENSG00000119616.11	ENST00000534938.6	794	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	48.7613932264835	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGGGAGATATTTATTATT	74705778	True	NA	NA	False	NA	NA	NA	74713169	74735040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74713260_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
transcript_4455.known	chr1	-	3048	16	FSM	ENSG00000090621.15	ENST00000372857.7	3048	16	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	130.79024768265	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39576731	False	NA	-14	True	AATAAA	-21	NA	39576744	39560815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_44560.known	chr14	+	574	6	FSM	ENSG00000119616.11	ENST00000554590.5	574	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	84.4559056549629	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTATCAGTTCATAACT	74705752	True	NA	NA	False	NA	NA	NA	74713143	74732817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74713201_74713484_74713621_74714871_74714944_74715950_74716100_74723271_74723345_74732730
transcript_44561.known	chr14	+	4341	8	FSM	ENSG00000119616.11	ENST00000341162.8	4341	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	44.8484978020674	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAATTCTATTTTTTTGG	74705752	True	NA	18	True	AATAAA	-20	NA	74713143	74738620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74713201_74713484_74713553_74714871_74714944_74715950_74716100_74723271_74723345_74732730_74732819_74734075_74734171_74734881
transcript_44565.known	chr14	+	568	6	FSM	ENSG00000119689.15	ENST00000556582.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.8090862182181	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAATAAGGGGTAAATTTAT	74873772	True	NA	NA	False	NA	NA	NA	74881915	74891289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74882017_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055
transcript_44566.known	chr14	+	2813	15	FSM	ENSG00000119689.15	ENST00000334220.9	2813	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	5.72899891529302	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGTTCCTGTATCTGTTC	74873772	True	NA	7	True	ATTAAA	-18	NA	74881915	74903743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_74882017_74882590_74882625_74885585_74885635_74889094_74889148_74889274_74889350_74889896_74889953_74891055_74891168_74892833_74892987_74893347_74893425_74894311_74894410_74898368_74898500_74899922_74899997_74900288_74900373_74901065_74901234_74902195
transcript_44567.nic	chr14	-	746	2	ISM	ENSG00000198208.12	ENST00000556776.1	583	3	1	252	1	-252	5prime_fragment	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAATCCTGAGCTGGTTAT	-74922514	True	NA	NA	False	AAAAAG	-10	NA	74923250	74921767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_74922443_74923179
transcript_44568.nic	chr14	-	816	2	ISM	ENSG00000198208.12	ENST00000553894.6	1626	7	-39	10895	8	-269	5prime_fragment	FALSE	canonical	3	17	junction_1	0	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAGAAAACAG	-74922558	True	NA	NA	False	NA	NA	NA	74923294	74921784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_74922486_74923179
transcript_44569.known	chr14	-	1693	7	FSM	ENSG00000119630.14	ENST00000238607.10	1693	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	13.2916013582513	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAAAGTATTCTAGTGTG	-74955366	True	NA	-28	True	NA	NA	NA	74955577	74941857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74942734_74946212_74946276_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953944_74955167
transcript_4457.known	chr1	-	2122	15	FSM	ENSG00000090621.15	ENST00000677609.1	2122	15	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	202.994885328148	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTACGTTTCCCAATAA	-39575900	False	NA	3	True	NA	NA	NA	39575913	39560856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564422_39564543_39564700_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_44573.known	chr14	-	1699	6	FSM	ENSG00000119630.14	ENST00000553716.5	1699	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12.1161049846888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAACGCTGATCTAGTG	-74955415	True	NA	-11	True	AATAAA	-11	NA	74955626	74941840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_74942734_74946378_74946409_74948506_74948584_74949356_74949554_74953903_74953947_74955167
transcript_44575.known	chr14	+	4304	8	FSM	ENSG00000119718.11	ENST00000266126.10	4304	8	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_4	13.7914495841682	924	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCAGTTTGTAAAGACACT	75002905	False	NA	NA	False	AATAAA	-16	NA	75002920	75012366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736_75004901_75005865_75005962_75006576_75006715_75007721_75007789_75009030
transcript_44580.known	chr14	+	772	4	FSM	ENSG00000119718.11	ENST00000555522.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_2	8.83176086632785	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGATCAAGTAAAACATTAAG	74997872	True	NA	NA	False	NA	NA	NA	75002932	75005017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75003154_75003274_75003396_75003550_75003700_75004736
transcript_44585.known	chr14	-	7819	12	FSM	ENSG00000119684.16	ENST00000380968.6	7819	12	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	19.2074365763553	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCATCCCTCTCTTCAT	NA	False	NA	-5	True	AATAAA	-21	NA	75051532	75013768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75017202_75018828_75018981_75022813_75022893_75022994_75023019_75030542_75030703_75032067_75032180_75038339_75038413_75039910_75040016_75041614_75041701_75042378_75042478_75046375_75049719_75051379
transcript_44586.known	chr14	-	616	2	FSM	ENSG00000119684.16	ENST00000553263.1	616	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTAGACTGGAGTTTGAG	-75050324	True	NA	NA	False	NA	NA	NA	75051504	75049168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75049719_75051438
transcript_44587.known	chr14	-	8278	22	FSM	ENSG00000119638.14	ENST00000238616.10	8278	22	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_10	18.3285708099816	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGCTCCTATTTAAATA	-75123739	True	NA	NA	False	ATTAAA	-16	NA	75127048	75079352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75084687_75087017_75087231_75088479_75088642_75091269_75091479_75095371_75095432_75097099_75097271_75100991_75101154_75101656_75101766_75103841_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_44588.known	chr14	-	2146	14	FSM	ENSG00000119638.14	ENST00000553823.6	2146	14	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	12.6846130521993	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTTATACTTCAACAAAT	-75123655	True	NA	-53	True	NA	NA	NA	75126964	75103469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75103998_75105949_75105997_75106501_75106703_75107342_75107488_75109684_75109878_75110320_75110372_75113338_75113404_75114202_75114314_75117194_75117327_75118829_75118936_75120509_75120581_75121118_75121175_75124045_75124224_75126702
transcript_4459.known	chr1	-	2470	15	FSM	ENSG00000090621.15	ENST00000372862.7	2470	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	165.662384113606	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39576240	False	NA	-14	True	AATAAA	-21	NA	39576253	39560815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561684_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39564470_39564543_39564685_39564774_39565105_39565379_39567750_39567847_39568801_39568940_39569594_39569690_39569862_39570003_39571233_39571350_39572392_39572587_39575758
transcript_44596.known	chr14	+	1509	3	FSM	ENSG00000119703.15	ENST00000439583.2	1509	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGACTTGTGGTTTGTG	75069531	True	NA	20	True	ATTAAA	-15	NA	75069640	75078089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75069750_75070554_75071397_75077531
transcript_44597.known	chr14	+	3923	3	FSM	ENSG00000119703.15	ENST00000524913.3	3923	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGTGTTCCCTTTAATCT	75069531	True	NA	NA	False	AATAAA	-16	NA	75069640	75079988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75069750_75070554_75071912_75077531
transcript_44603.known	chr14	-	612	1	FSM	ENSG00000170348.9	ENST00000622441.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTGTGTCAGTTACTGT	-75147606	False	NA	NA	False	AATAAA	-18	NA	75176532	75175920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75175900_75176500
transcript_44604.known	chr14	-	650	4	FSM	ENSG00000119640.9	ENST00000357971.7	650	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	128.222029655161	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75060548	True	NA	-23	True	AATAAA	-16	NA	75064015	75053242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75053660_75061683_75061763_75063469_75063562_75063953
transcript_44605.known	chr14	-	565	3	FSM	ENSG00000119640.9	ENST00000555694.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_2	157	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAGAGTACTTTTAAAA	-75060560	True	NA	-23	True	AATAAA	-16	NA	75064027	75053242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75053660_75063469_75063562_75063971
transcript_44606.known	chr14	-	639	4	FSM	ENSG00000119640.9	ENST00000555135.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	132.410976382876	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTAGCATAATATCCTC	-75060540	True	NA	NA	False	NA	NA	NA	75064007	75059847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75060262_75061683_75061763_75063469_75063562_75063953
transcript_44607.known	chr14	-	4109	5	FSM	ENSG00000170348.9	ENST00000303575.9	4109	5	0	0	0	0	multi-exon	FALSE	canonical	3	1841	junction_2	41.4276477729547	2155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGGTGTACTGTTACTC	-75147686	True	NA	-32	True	AATAAA	-16	NA	75176612	75131468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75135007_75135759_75135887_75147663_75147738_75152031_75152144_75176354
transcript_44608.known	chr14	+	2104	4	FSM	ENSG00000170345.10	ENST00000303562.9	2104	4	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	7.58653778449403	177	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAACCTTGTGCTCTTTTCA	75277824	True	NA	10	True	AATAAA	-21	NA	75278827	75282230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75279124_75279876_75280129_75280559_75280668_75280782
transcript_44611.known	chr14	+	630	2	FSM	ENSG00000259687.3	ENST00000669323.2	679	2	49	0	49	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCTTTCTCTTCCTGC	75294416	True	NA	101	True	AAAACA	-24	NA	75294494	75296506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75294738_75296119
transcript_44612.known	chr14	+	159	2	FSM	ENSG00000259687.3	ENST00000561000.2	525	2	0	366	0	-366	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTAAGAAGACGACTGCTT	75294325	True	NA	NA	False	NA	NA	NA	75294403	75296140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75294542_75296119
transcript_44613.known	chr14	+	4716	32	FSM	ENSG00000119685.20	ENST00000298832.14	4716	32	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	17.3103519039476	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTTTTTTTTCCCTTTA	75658892	True	NA	11	True	AATAAA	-16	NA	75661245	75955079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75717860_75717963_75719734_75719827_75720595_75720704_75732337_75732420_75733988_75734051_75735194_75735290_75745094_75745209_75745489_75745582_75752892_75752956_75764614_75764773_75766061_75766369_75771733_75771855_75775483_75775631_75776746_75776851_75779574_75779703_75782486_75782574_75783146_75783531_75792915_75793101_75820006_75820162_75863666_75863863_75882684_75882903_75902141_75902225_75954423
transcript_44615.known	chr14	+	1595	10	FSM	ENSG00000119685.20	ENST00000286650.9	1595	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	45.8930587290297	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	75658924	True	NA	NA	False	NA	NA	NA	75661277	75709828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75661388_75663054_75663224_75669415_75669523_75681544_75681628_75683549_75683657_75690191_75690323_75699187_75699271_75707017_75707088_75707622_75707708_75709178
transcript_44618.known	chr14	+	3629	10	FSM	ENSG00000119686.10	ENST00000238667.9	3629	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	16.669629366302	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCTGCCTTATCATTCA	75578155	True	NA	6	True	AATAAA	-14	NA	75578619	75648167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75579642_75622078_75622221_75624611_75624753_75633628_75633697_75634909_75635014_75639351_75639463_75640954_75641061_75641181_75641294_75641842_75641899_75646400
transcript_4462.known	chr1	-	876	7	FSM	ENSG00000090621.15	ENST00000437136.5	876	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	220.102248966248	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGTCTCTGACCAC	-39564384	False	59	-14	True	AATAAA	-21	NA	39564491	39560815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39561123_39561727_39561788_39562072_39562204_39562322_39562417_39563613_39563742_39563835_39563923_39564422
transcript_4463.known	chr1	-	4077	5	FSM	ENSG00000163909.8	ENST00000372852.4	4077	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.06155281280883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAAGGTGAGATATCTT	-39639374	True	NA	2	True	AATAAA	-20	NA	39639643	39623434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39627181_39630226_39630309_39631495_39631580_39632648_39632716_39639545
transcript_44631.known	chr14	-	2320	5	FSM	ENSG00000133935.7	ENST00000256319.7	2320	5	0	0	0	0	multi-exon	FALSE	canonical	3	1203	junction_2	74.7813479418498	3186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAGGTCAGAAAAGG	-75649610	True	NA	NA	False	NA	NA	NA	75660876	75649790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75651635_75651770_75651890_75654885_75654977_75657369_75657534_75660774
transcript_4464.known	chr1	-	4600	4	FSM	ENSG00000116983.13	ENST00000372844.8	4600	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGGCTCCTGCTCTTCC	-39691371	True	NA	-3	True	AATAAA	-14	NA	39691433	39678647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39682734_39683936_39684153_39684441_39684612_39691305
transcript_44643.known	chr14	+	441	2	FSM	ENSG00000119686.10	ENST00000554496.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTGCACCTATCACCAAA	75578991	False	NA	NA	False	NA	NA	NA	75579455	75646655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75579642_75646400
transcript_44644.known	chr14	-	402	1	FSM	ENSG00000242951.1	ENST00000489251.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGCTGCAATGGTGTAAT	NA	False	NA	NA	False	AAAAAG	-13	NA	75596206	75595804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_75595800_75596200
transcript_44648.known	chr14	+	1008	10	FSM	ENSG00000119650.13	ENST00000679083.1	1008	10	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	105.817569546325	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCCTCCATTTCTTTCCA	75983087	True	NA	8	True	AATAAA	-17	NA	75985752	76083741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75986125_75986309_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_44652.known	chr14	+	816	9	FSM	ENSG00000119650.13	ENST00000314067.11	816	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_4	30.4094454898474	1083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	75983097	True	NA	9	True	AATAAA	-18	NA	75985762	76083742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_44653.known	chr14	+	1765	9	FSM	ENSG00000119650.13	ENST00000555305.5	1765	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	93.8815743370338	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAAAAACAAAGAGGCTCAA	75983114	True	NA	NA	False	ATTAAA	-5	NA	75985779	76084585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082693_76083226_76083290_76083457_76083637_76083762
transcript_44664.nic	chr14	+	1088	8	ISM	ENSG00000119650.13	ENST00000555305.5	1765	9	-40	843	-13	0	5prime_fragment	FALSE	canonical	3	228	junction_4	32.504316824768	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTCCATTTCTTTCCAG	NA	False	NA	9	True	AATAAA	-18	NA	75985739	76083742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641_76058675_76059326_76059374_76082294_76082693_76083226_76083290_76083457
transcript_44666.known	chr14	+	816	8	FSM	ENSG00000119650.13	ENST00000238628.10	816	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	130.661738071703	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTTCTTTCCAGTCTC	75983116	True	NA	13	True	AATAAA	-22	NA	75985781	76083746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76076596_76076692_76082294_76082368_76082616_76082693_76083226_76083290_76083457
transcript_44694.known	chr14	+	848	4	FSM	ENSG00000119650.13	ENST00000556742.1	848	4	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	32.6190128606002	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCGTGTTTGAAACTCA	75983118	True	NA	2	True	AATAAA	-15	NA	75985783	76059271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_75985841_75988884_75988978_76022326_76022395_76058641
transcript_4470.known	chr1	-	1826	1	FSM	ENSG00000198754.5	ENST00000327582.5	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCCTCACTGTGTTTC	NA	False	NA	NA	False	ATTAAA	-18	NA	39771348	39769522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39769500_39771300
transcript_44704.nnic	chr14	+	1520	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-15	-2477	intron_retention	FALSE	canonical	2	9	junction_9	42.5783228914305	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGATTGTATTCCTGT	76146173	True	NA	5	True	ATTAAA	-14	NA	76151900	76199530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199399
transcript_44705.nnic	chr14	+	1873	10	NNC	ENSG00000089916.18	novel	14021	10	NA	NA	-15	-1644	intron_retention	FALSE	canonical	3	16	junction_9	40.5298244095218	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTCTAGGGTAGTGCTT	76146173	True	NA	1	True	AATAAA	-14	NA	76151900	76200363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76199879
transcript_44706.known	chr14	+	14021	10	FSM	ENSG00000089916.18	ENST00000261530.12	14021	10	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_9	23.6068623628233	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGAGATTTCCTCTGCCAT	76146194	True	NA	-4	True	NA	NA	NA	76151921	76214343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76173626_76176622_76176691_76177987_76178043_76180763_76180850_76195877_76195973_76201690
transcript_4471.known	chr1	+	4339	10	FSM	ENSG00000084072.17	ENST00000324379.10	4339	10	0	0	0	0	multi-exon	TRUE	canonical	3	685	junction_1	75.3103865412179	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTGTTTATTTGACTTG	39734483	True	NA	NA	False	AATAAA	-17	NA	39738881	39756769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39753286
transcript_44714.known	chr14	+	1458	5	FSM	ENSG00000089916.18	ENST00000557263.5	1458	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8198298387348	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAACAAAACTG	76146194	True	NA	NA	False	NA	NA	NA	76151921	76174035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151976_76154353_76155026_76166662_76166728_76171842_76172020_76173545
transcript_4472.known	chr1	+	1213	10	FSM	ENSG00000084072.17	ENST00000475350.5	1213	10	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	320.287370965513	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	39734509	True	NA	32	True	AATAAA	-30	NA	39738907	39753716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745413_39745499_39748902_39749089_39752909_39753053_39753286
transcript_44720.known	chr14	+	6248	6	FSM	ENSG00000089916.18	ENST00000554125.5	6248	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	55.2253564950015	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAATACAAAAAAAAAAAA	76146206	True	NA	NA	False	NA	NA	NA	76151933	76180022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_76151992_76154353_76155026_76166662_76166728_76171842_76172020_76173545_76176691_76177891
transcript_44721.nnic	chr14	+	509	2	NNC	ENSG00000258454.1	novel	520	3	NA	NA	22413	29	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGCACAGTGACTGAGT	NA	False	NA	NA	False	AATAAA	-18	NA	76258229	76263503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_76258435_76263199
transcript_44722.known	chr14	-	374	1	FSM	ENSG00000241081.1	ENST00000469811.1	374	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTCATTTATCTGGAATAT	-76886740	True	NA	NA	False	NA	NA	NA	76886750	76886376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_76886400_76886800
transcript_44724.nnic	chr14	-	963	3	Genic_Genomic	ENSG00000241081.1	novel	374	1	NA	NA	-82433	71	multi-exon	FALSE	non_canonical	0	0	junction_1	0	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTTCTCTCTAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-30	NA	76969183	76886305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_-_76886760_76968554_76968918_76969037
transcript_44727.nnic	chr14	+	896	3	Genic_Genomic	ENSG00000243225.2	novel	463	1	NA	NA	-82371	38	multi-exon	FALSE	non_canonical	0	0	junction_1	0	457	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAAAACCATGTCTCT	NA	False	NA	NA	False	AATATA	-21	NA	76886311	76969183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_+_76886686_76968541_76968918_76969037
transcript_44729.nnic	chr14	-	853	3	Genic_Genomic	ENSG00000241081.1	novel	374	1	NA	NA	-82433	65	multi-exon	FALSE	non_canonical	0	0	junction_1	0	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATTTTCTCTCTAAAAA	NA	False	NA	NA	False	AATAAA	-24	NA	76969183	76886311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_-_76886628_76968526_76968918_76969037
transcript_4473.known	chr1	+	1079	10	FSM	ENSG00000084072.17	ENST00000356511.6	1079	10	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_9	265.511851354844	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734486	True	NA	10	True	AATAAA	-18	NA	39738884	39763914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39763688
transcript_44730.nnic	chr14	+	1049	3	Genic_Genomic	ENSG00000243225.2	novel	463	1	NA	NA	-82371	38	multi-exon	FALSE	non_canonical	0	0	junction_1	0	484	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGTAAAACCATGTCTCT	NA	False	NA	NA	False	AATATA	-21	NA	76886311	76969183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr14_+_76886839_76968541_76968918_76969037
transcript_44732.known	chr14	-	861	2	FSM	ENSG00000258819.2	ENST00000556781.1	861	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGACACAAGGGAGAAGGC	-77076061	True	NA	NA	False	NA	NA	NA	77076142	77074541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77075365_77076104
transcript_44733.known	chr14	-	980	2	FSM	ENSG00000258819.2	ENST00000658895.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGGTAATCTGTTATG	NA	False	NA	NA	False	AATAAA	-28	NA	77076392	77073906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77074599_77076104
transcript_44735.known	chr14	+	1004	8	FSM	ENSG00000165548.11	ENST00000554766.5	1004	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.91662969499982	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGGCAAAGCTCAGCTGGC	NA	False	NA	NA	False	NA	NA	NA	77181622	77231730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77181898_77196070_77196231_77213445_77213509_77218800_77218964_77219497_77219578_77220005_77220088_77225423_77225462_77231587
transcript_44736.known	chr14	+	599	4	FSM	ENSG00000198894.8	ENST00000555611.5	599	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.7334685596986	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGGTGAGAAAAAGTCCGAC	77094797	True	NA	NA	False	NA	NA	NA	77098281	77113545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113384
transcript_44737.known	chr14	+	4325	4	FSM	ENSG00000198894.8	ENST00000361786.7	4325	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	12.2836838484589	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTTTTTGCTTTATA	77094773	True	NA	10	True	AATAAA	-21	NA	77098257	77117287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77098362_77105656_77105845_77109811_77109982_77113424
transcript_44739.known	chr14	+	538	2	FSM	ENSG00000198894.8	ENST00000556863.1	538	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCAATTGGTCACTGGA	77094773	True	NA	NA	False	NA	NA	NA	77098257	77106090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77098362_77105656
transcript_4474.known	chr1	+	1198	11	FSM	ENSG00000084072.17	ENST00000372830.5	1198	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_10	335.512443882489	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTCTCATAAAGCCCAT	39734502	True	NA	10	True	AATAAA	-18	NA	39738900	39763914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738932_39740164_39740264_39741365_39741410_39741894_39741922_39743215_39743298_39743823_39743925_39745374_39745499_39748902_39749089_39752909_39753053_39762516_39762652_39763688
transcript_44743.known	chr14	-	3408	3	FSM	ENSG00000177108.5	ENST00000319374.4	3408	3	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	3.5	464	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATATGATTGTATGGGC	-77135276	True	NA	-4	True	AATAAA	-21	NA	77141791	77131269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77133949_77139212_77139753_77141602
transcript_44745.known	chr14	+	1010	10	FSM	ENSG00000100577.19	ENST00000361389.8	1010	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	60.7687379017603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAAATCCTGCCCCGTT	77316598	True	NA	NA	False	NA	NA	NA	77320995	77331195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77322546_77322733_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44749.known	chr14	+	873	8	FSM	ENSG00000100577.19	ENST00000557639.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	45.2764749475207	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGCTGAAACTTGTTCCAC	77316622	True	NA	NA	False	NA	NA	NA	77321019	77331320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_4475.known	chr1	+	4651	10	FSM	ENSG00000084072.17	ENST00000495526.5	4651	10	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_4	382.725540702698	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTGGGAGTTGTCAGAG	39734489	True	NA	32	True	AATAAA	-30	NA	39738887	39753716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39738924_39740164_39740264_39741365_39741410_39741894_39742032_39743215_39743298_39743823_39743925_39745374_39748768_39748902_39749089_39752909_39753053_39753286
transcript_44753.known	chr14	+	580	7	FSM	ENSG00000100577.19	ENST00000557053.5	580	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	63.3271926847648	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTTGGCACAGGGCCACAGG	77316680	True	NA	NA	False	NA	NA	NA	77321077	77331211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77326837_77326906_77327471_77327553_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44762.known	chr14	+	1186	9	FSM	ENSG00000100577.19	ENST00000216465.10	1186	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	14.6708682428819	969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTTTGTCTAAGACTGA	77316638	True	NA	22	True	ATTAAA	-19	NA	77321035	77331597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77321184_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44763.known	chr14	+	979	9	FSM	ENSG00000100577.19	ENST00000553586.5	979	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	49.7680557687358	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAACACCACGGGGAAGGCT	77320171	False	NA	18	True	ATTAAA	-19	NA	77324568	77331484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77324623_77324869_77324922_77326837_77326906_77327471_77327553_77327911_77328038_77329122_77329202_77329754_77329808_77330309_77330360_77331068
transcript_44764.known	chr14	-	7761	6	FSM	ENSG00000100580.8	ENST00000216468.8	7761	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_3	5.84465567848098	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGTAACATCTGAGTTAT	-77375584	True	NA	-9	True	AATAAA	-16	NA	77377094	77335028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77341989_77343177_77343484_77343696_77343824_77346348_77346479_77351672_77351752_77376935
transcript_44765.known	chr14	+	412	3	FSM	ENSG00000100583.5	ENST00000533095.2	412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGATCAAACTAAATTACT	77376674	False	NA	NA	False	NA	NA	NA	77376688	77391268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77376741_77380382_77380482_77391007
transcript_44766.known	chr14	-	2530	20	FSM	ENSG00000151445.16	ENST00000557658.6	2530	20	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_7	12.150715583729	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCGCTCCTGGTGGTTT	-77456282	True	NA	-8	True	AATAAA	-24	NA	77457601	77426674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77427637_77428369_77428475_77429005_77429096_77429680_77429768_77433841_77433932_77434261_77434304_77435258_77435394_77435843_77435920_77437807_77437882_77441065_77441094_77442559_77442663_77443118_77443153_77444248_77444342_77448493_77448551_77449292_77449358_77449713_77449753_77451186_77451334_77453298_77453402_77454009_77454103_77457494
transcript_4477.known	chr1	-	5051	11	FSM	ENSG00000043514.17	ENST00000316891.10	5051	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	42.6234677143941	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAGAGACTCAACAATAC	-39880751	True	NA	NA	False	NA	NA	NA	39883504	39838109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_44780.known	chr14	+	1337	9	FSM	ENSG00000100591.8	ENST00000216479.8	1337	9	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_7	69.1997787207445	4515	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGTGTCTGGAACCTATGT	77447619	True	NA	39	True	AATAAA	-17	NA	77458092	77469472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77458270_77459615_77459807_77462159_77462243_77462641_77462760_77464597_77464687_77465538_77465668_77468082_77468185_77468456_77468509_77469076
transcript_44781.known	chr14	-	2940	7	FSM	ENSG00000100593.18	ENST00000342219.9	2940	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGCCTGATGAAGACTTT	-77498708	True	NA	3	True	AATAAA	-17	NA	77498816	77474393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77476113_77478241_77478326_77478574_77478716_77482321_77482668_77484322_77484566_77484676_77484920_77498652
transcript_44783.known	chr14	-	8034	12	FSM	ENSG00000100596.8	ENST00000216484.7	8034	12	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_6	21.7023440102029	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGCCTTTATTCATTCA	-77610875	True	NA	-1	True	AATAAA	-16	NA	77616637	77505996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77512404_77518037_77518168_77521445_77521582_77552095_77552223_77555299_77555520_77557040_77557147_77562395_77562490_77570383_77570509_77576766_77576916_77578954_77579110_77597185_77597381_77616447
transcript_44794.known	chr14	-	2597	6	FSM	ENSG00000100601.10	ENST00000216489.8	2597	6	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	7.19444229944198	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAGCTAGGTTCTTTG	-77705621	True	NA	1	True	AATAAA	-21	NA	77708023	77672403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77694737_77694901_77704368_77704478_77707821
transcript_44795.known	chr14	-	649	5	FSM	ENSG00000100601.10	ENST00000555100.1	649	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	44.8351145866719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAATCCAGAAGGGGAAGG	-77705590	True	NA	NA	False	NA	NA	NA	77707992	77674102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77674242_77675655_77675795_77679879_77679971_77704368_77704478_77707821
transcript_44796.known	chr14	-	1750	5	FSM	ENSG00000100601.10	ENST00000557057.5	1750	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	38.7201497930987	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAATAAACTCACTTGAT	-77705608	True	NA	-60	True	AATAAA	-34	NA	77708010	77673074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77674242_77675655_77675850_77679879_77679971_77704368_77704478_77707821
transcript_44799.nic	chr14	-	728	4	NIC	ENSG00000100601.10	novel	497	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	42.2400547137693	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGAGATACCTTTTTTTT	-77705625	True	NA	NA	False	AATAAA	-16	NA	77708027	77691732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_77691983_77694737_77694901_77704368_77704478_77707821
transcript_44802.known	chr14	-	1966	14	FSM	ENSG00000100603.14	ENST00000556428.5	1966	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	194.296028640737	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTTTGTGTAAGAACAG	NA	False	NA	-148	True	NA	NA	NA	77761207	77717790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755099_77761113
transcript_44806.known	chr14	+	471	5	FSM	ENSG00000119705.10	ENST00000555890.5	471	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	7260.90485063673	2335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAATTTTGTCTAAATGTT	77571063	True	NA	25	True	AATAAA	-13	NA	77708113	77717593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710554_77710666_77710837_77710897_77715771_77715880_77717495
transcript_4482.nic	chr1	-	2013	10	NIC	ENSG00000043514.17	novel	5051	11	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	53.5691545666688	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880800	False	NA	-24	True	AATAAA	-17	NA	39883553	39841050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39853969_39854069_39857276_39857418_39883317
transcript_44824.known	chr14	+	445	3	FSM	ENSG00000119705.10	ENST00000554074.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	8267.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCATAGGTATTTGTGT	77571070	True	NA	NA	False	ATTAAA	-13	NA	77708120	77712038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710897_77711740
transcript_44825.known	chr14	+	729	3	FSM	ENSG00000119705.10	ENST00000556831.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	14792	junction_2	873.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGCGGTGGTAGGCCAGG	77571068	True	NA	NA	False	AAAAAG	-3	NA	77708118	77716351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710897_77715771
transcript_44826.known	chr14	+	865	4	FSM	ENSG00000119705.10	ENST00000557623.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	7414.92487412306	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATGCTGAGATATAAAATT	77571052	True	NA	NA	False	AATATA	-17	NA	77708102	77721107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710897_77715771_77715880_77720515
transcript_44827.known	chr14	+	285	4	FSM	ENSG00000119705.10	ENST00000553981.1	285	4	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_2	6830.7389709232	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTAAATGTTTTTAT	77571127	True	NA	30	True	AATAAA	-18	NA	77708177	77717598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77708209_77710837_77710881_77715771_77715880_77717495
transcript_44828.known	chr14	-	2129	14	FSM	ENSG00000100603.14	ENST00000261531.12	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_13	76.5857990451534	1420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCAGTTATGTTAACTTT	-77751912	True	NA	-20	True	AATAAA	-16	NA	77761156	77717598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_77718287_77718366_77718531_77720710_77720829_77723180_77723278_77730987_77731130_77732484_77732602_77734946_77735013_77735936_77736007_77736970_77737076_77738777_77738885_77738965_77739062_77751318_77751481_77754966_77755121_77761113
transcript_4483.known	chr1	-	2026	10	FSM	ENSG00000043514.17	ENST00000537440.5	2026	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	55.1787219680258	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCATGCCTAGTTTATACA	-39880751	True	NA	5	True	AAAAAG	-9	NA	39883504	39841021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_44831.known	chr14	+	3268	11	FSM	ENSG00000063761.16	ENST00000238561.10	3268	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	6.35609943282828	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCATGGTTACTTGCTTTT	77799679	True	NA	NA	False	AGTAAA	-23	NA	77800108	77935014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77859075_77859280_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_44835.known	chr14	+	1972	10	FSM	ENSG00000063761.16	ENST00000341211.5	1972	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.1657508881031	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGATTTGTCCATCATAAC	77799709	True	NA	15	True	AATAAA	-17	NA	77800138	77933952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_77800171_77818967_77819114_77822434_77822519_77887090_77887250_77899099_77899259_77907802_77907920_77924456_77924607_77925763_77925962_77931517_77931712_77933219
transcript_4484.known	chr1	-	2034	10	FSM	ENSG00000043514.17	ENST00000372818.5	2034	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	55.4699340205747	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880753	True	NA	-24	True	AATAAA	-17	NA	39883506	39841050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847547_39847661_39847985_39848098_39850118_39850262_39852730_39852877_39853969_39854069_39857276_39857418_39883317
transcript_44844.nnic	chr14	+	1464	3	NNC	ENSG00000258766.1	novel	1597	9	NA	NA	243813	17509	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCAGTGTATGTT	80455217	True	NA	NA	False	NA	NA	NA	80455231	80472978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_80455390_80464769_80464957_80471859
transcript_44845.known	chr14	-	1606	14	FSM	ENSG00000100629.17	ENST00000216517.10	1606	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.7334570661887	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGCAATGGTAATTA	-80940414	True	NA	NA	False	AATAAA	-17	NA	80941687	80830164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_80830284_80831142_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
transcript_44846.nic	chr14	-	2570	13	ISM	ENSG00000100629.17	ENST00000555265.6	4614	25	-54	333686	-54	0	5prime_fragment	FALSE	canonical	3	21	junction_5	6.09815545882523	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGCAATGGTAATTA	-80940519	True	NA	NA	False	AATAAA	-17	NA	80941792	80830164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
transcript_44847.known	chr14	-	4614	25	FSM	ENSG00000100629.17	ENST00000555265.6	4614	25	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_17	6.96419413859206	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTTTGTGTTTGTTAA	-80940465	True	NA	NA	False	AATAAA	-22	NA	80941738	80496478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_80497583_80504911_80505021_80526868_80526983_80530808_80530887_80559278_80559303_80580373_80580424_80743074_80743268_80756891_80756952_80761436_80761614_80777881_80778047_80784894_80785546_80792759_80793111_80831142_80831295_80836204_80836338_80838203_80838279_80840681_80840769_80862756_80862874_80895717_80895791_80899937_80900030_80904812_80904932_80905954_80906082_80914321_80914409_80916400_80916563_80939384_80939541_80941580
transcript_44848.known	chr14	-	6343	9	FSM	ENSG00000165417.12	ENST00000553612.6	6343	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	3.59687364248454	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTATTTTGCAGTTTAA	-81210752	True	NA	0	True	AATAAA	-25	NA	81220959	81175451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81180331_81185530_81185621_81192518_81192840_81196107_81196242_81197408_81197485_81201593_81201659_81203899_81204105_81216412_81216515_81220488
transcript_4485.known	chr1	-	1851	9	FSM	ENSG00000043514.17	ENST00000441669.6	1851	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	57.8332732948776	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880738	True	NA	-24	True	AATAAA	-17	NA	39883491	39841050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848092_39850118_39850262_39852730_39852877_39883317
transcript_44852.known	chr14	+	1130	2	FSM	ENSG00000273783.2	ENST00000618431.1	1130	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGTAATTCATTTAATA	81221092	False	NA	7	True	TATAAA	-17	NA	81221217	81222460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_81221526_81221638
transcript_44853.nnic	chr14	-	773	4	NNC	ENSG00000140022.14	novel	11084	9	NA	NA	-1	-26082	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.3260852434302	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTTTTTTGATATGGTG	-81431274	True	NA	NA	False	AATAAA	-18	NA	81436466	81424454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81424804_81425633_81425801_81427101_81427213_81436320
transcript_44854.nic	chr14	-	1676	3	ISM	ENSG00000140022.14	ENST00000649389.1	4382	9	-7	136380	-1	1211	5prime_fragment	FALSE	canonical	3	27	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCTTTTGTTGTACA	-81431274	True	NA	NA	False	ATTAAA	-19	NA	81436466	81397161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_81398581_81427101_81427213_81436320
transcript_44855.nnic	chr14	-	608	3	NNC	ENSG00000140022.14	novel	11084	9	NA	NA	-1	-26080	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	11.5	46	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTGATATGGTGTC	-81431274	True	NA	NA	False	AATAAA	-20	NA	81436466	81424452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_81424804_81427101_81427213_81436320
transcript_44857.known	chr14	-	751	3	FSM	ENSG00000258675.2	ENST00000657354.1	751	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAATTTTTACTTATCC	NA	False	NA	NA	False	AATAAA	-21	NA	81450365	81441999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81442197_81442365_81442443_81449888
transcript_44858.known	chr14	-	7919	21	FSM	ENSG00000071537.14	ENST00000336735.9	7919	21	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_10	15.2390124351941	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGGTTTCCCACTGCCTCC	-81532593	True	NA	NA	False	TATAAA	-19	NA	81533853	81471546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_81477182_81479611_81479741_81484224_81484398_81485671_81485747_81486288_81486455_81487389_81487539_81487854_81487943_81489251_81489315_81490387_81490466_81492479_81492549_81495080_81495138_81497891_81498047_81498412_81498495_81499458_81499519_81499608_81499663_81502720_81502884_81504200_81504307_81506073_81506242_81526732_81526965_81527700_81527739_81533674
transcript_44860.nic	chr14	-	536	3	ISM	ENSG00000071537.14	ENST00000557372.1	594	5	-6	22385	-2	-22385	5prime_fragment	FALSE	canonical	3	150	junction_1	10.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCTTCACTGATTATTAC	-81532595	True	NA	NA	False	AATAAA	-15	NA	81533855	81526647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_81526965_81527700_81527739_81533674
transcript_44864.known	chr14	+	639	5	FSM	ENSG00000258743.7	ENST00000690424.1	791	5	5	147	0	8	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGAATTTCTGATGTGGG	82642468	True	NA	NA	False	AAAAAG	-8	NA	82642619	82695192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_82642675_82650923_82650997_82685379_82685432_82687313_82687370_82694789
transcript_44869.known	chr14	+	1105	4	FSM	ENSG00000258743.7	ENST00000657900.1	1105	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCCTCCTTAGACTGTT	82642468	True	NA	NA	False	ATTAAA	-15	NA	82642619	82660215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_82642675_82650923_82650997_82657114_82657212_82659335
transcript_4489.known	chr1	-	1156	8	FSM	ENSG00000043514.17	ENST00000495175.6	1156	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	40.2380670611341	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCACCATTTTCTTTTG	-39880758	True	NA	NA	False	NA	NA	NA	39883511	39841625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39850118_39850262_39883317
transcript_44890.known	chr14	-	3794	17	FSM	ENSG00000054983.17	ENST00000261304.7	3794	17	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	12.9638921624642	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTGTGTCAAATATATTT	-87992219	True	NA	-2	True	ATTAAA	-18	NA	87993182	87933013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_87934879_87939904_87939982_87941394_87941559_87945552_87945734_87947727_87947879_87949844_87949932_87950658_87950749_87963383_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_44892.known	chr14	-	1221	10	FSM	ENSG00000054983.17	ENST00000622264.4	1221	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_9	11.3442213494224	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTTGTTTTACATGTAA	-87992191	True	NA	2	True	AATAAA	-14	NA	87993154	87963313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_87963512_87965504_87965630_87968334_87968491_87976357_87976489_87982204_87982244_87984393_87984534_87986488_87986603_87988143_87988208_87988454_87988524_87992969
transcript_44898.known	chr14	+	2000	12	FSM	ENSG00000042317.17	ENST00000393545.9	2000	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	10.560334329794	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	88384880	True	NA	14	True	AATAAA	-25	NA	88385656	88438460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88393392_88393489_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44899.nic	chr14	+	1974	12	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	0	0	intron_retention	FALSE	canonical	2	3	junction_3	17.5150466600615	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTACTTTTCTTCC	88384867	True	NA	9	True	AATAAA	-20	NA	88385643	88438455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88385838_88391380_88391456_88396155_88396204_88415204_88415267_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44900.known	chr14	+	1891	11	FSM	ENSG00000042317.17	ENST00000356583.9	1891	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9.51262319236918	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTACTTTTCTTCCTTT	88384891	True	NA	12	True	AATAAA	-23	NA	88385667	88438458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44902.nnic	chr14	+	971	5	NIC	ENSG00000042317.17	novel	1410	13	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_3	19.7167441531304	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATATTACTTTTCTTCC	88384867	True	NA	9	True	AATAAA	-20	NA	88385643	88438455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88385838_88391380_88391456_88396155_88396185_88437542_88437598_88437837
transcript_44903.known	chr14	+	2301	12	FSM	ENSG00000042317.17	ENST00000556553.5	2301	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.3552962839192	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTACTTTTCTTCCTTTTT	NA	False	NA	14	True	AATAAA	-25	NA	88384923	88438460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88385062_88385397_88385838_88391380_88391456_88396155_88396204_88416710_88416845_88426231_88426705_88427629_88427697_88429347_88429464_88431171_88431226_88433134_88433213_88437542_88437598_88437837
transcript_44908.known	chr14	+	18153	17	FSM	ENSG00000100722.20	ENST00000251038.10	18153	17	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_10	113.812328390865	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTATTCTTGTTTTTT	88552895	True	NA	NA	False	ATTAAA	-17	NA	88563036	88627596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_44910.known	chr14	+	2529	17	FSM	ENSG00000100722.20	ENST00000555755.5	2529	17	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_12	168.697850738384	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGTTAAAATATTTG	88552896	True	NA	NA	False	NA	NA	NA	88563037	88611991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88601923_88602084_88602827_88603046_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_44916.known	chr14	+	2195	16	FSM	ENSG00000100722.20	ENST00000393514.9	2195	16	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_9	161.676989361161	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACTCTACAGAACTTGTC	88552992	False	NA	-44	True	NA	NA	NA	88563133	88611810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88601923_88602084_88602827_88603061_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_44923.known	chr14	+	2075	15	FSM	ENSG00000100722.20	ENST00000556945.5	2075	15	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_10	139.927751036755	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAAGTGTCTAATT	88552868	True	NA	30	True	AATATA	-32	NA	88563009	88611884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_44925.nic	chr14	+	2107	15	NIC	ENSG00000100722.20	novel	2529	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_10	152.233591321136	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTATTGCCTATCT	88552816	True	NA	13	True	AATATA	-15	NA	88562957	88611867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88596733_88596809_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_4493.nnic	chr1	-	1584	7	NIC	ENSG00000043514.17	novel	1156	8	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_6	50.3587132480567	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCTCTTTGATCCTTAAAAA	-39880754	True	NA	-24	True	AATAAA	-17	NA	39883507	39841050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_39841914_39844100_39844219_39844530_39844641_39847219_39847298_39847547_39847661_39847985_39848098_39883317
transcript_44931.nic	chr14	+	2035	14	NIC	ENSG00000100722.20	novel	2075	15	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	154.342468663476	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTTATTGCCTATCT	88552816	True	NA	13	True	AATATA	-15	NA	88562957	88611867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_44932.nic	chr14	+	3147	14	NIC	ENSG00000100722.20	novel	2195	16	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_9	154.342468663476	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTTCA	88552816	True	NA	22	True	AATAAA	-35	NA	88562957	88612979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609711_88609804_88610833_88610941_88611744
transcript_44933.known	chr14	+	2560	14	FSM	ENSG00000100722.20	ENST00000302216.12	2560	14	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_9	166.512859996995	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCAGAAAATAGGAACAGTT	88552828	True	NA	NA	False	NA	NA	NA	88562969	88612407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88563170_88563650_88563694_88568038_88568154_88571083_88571125_88572029_88572226_88572577_88573008_88574692_88574854_88575839_88575941_88577984_88578141_88607242_88607364_88609266_88609404_88609714_88609804_88610833_88610941_88611744
transcript_44945.known	chr14	+	2183	15	FSM	ENSG00000165533.19	ENST00000380656.7	2183	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.7499731471384	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823584	True	NA	16	True	AATAAA	-19	NA	88824650	88877988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88833692_88833723_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44946.known	chr14	+	5270	14	FSM	ENSG00000165533.19	ENST00000622513.4	5270	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	15.7772962488215	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTGTGTGTTTTTTTTTT	88823557	True	NA	NA	False	ATTAAA	-13	NA	88824623	88881078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88841424_88841515_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44949.known	chr14	+	2058	13	FSM	ENSG00000165533.19	ENST00000346301.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	9.14201229975594	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTTCATTATTTTTTAAT	88823589	True	NA	16	True	AATAAA	-19	NA	88824655	88877988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88875025_88875110_88877293
transcript_44950.known	chr14	+	1859	12	FSM	ENSG00000165533.19	ENST00000554686.5	1859	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	14.8652348320358	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCTTTAAAATAAATCATTG	88823672	True	NA	-16	True	ATTAAA	-21	NA	88824738	88877956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_88824822_88839451_88839573_88840864_88840929_88841036_88841197_88843805_88843851_88852970_88853057_88857189_88857278_88861221_88861333_88870058_88870199_88871548_88871724_88872329_88872453_88877293
transcript_44954.known	chr14	+	490	2	FSM	ENSG00000283627.1	ENST00000637466.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTGCTTAGACTTGATG	NA	False	NA	NA	False	ACTAAA	-14	NA	89013385	89025807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89013560_89025491
transcript_44963.known	chr14	-	2421	5	FSM	ENSG00000053254.16	ENST00000615335.4	2421	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	36.9932426261878	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAACTAGA	-89411909	False	NA	6	True	NA	NA	NA	89412476	89161399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89162970_89180700_89180807_89280949_89281015_89350671_89350809_89411933
transcript_44964.known	chr14	-	851	4	FSM	ENSG00000053254.16	ENST00000555855.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	64.9940168186443	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCACACCCACACGTGTT	-89612647	True	NA	NA	False	AAAAAG	-10	NA	89619137	89350727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89350809_89411933_89412491_89486568_89486672_89619027
transcript_44965.known	chr14	+	1077	2	FSM	ENSG00000258920.1	ENST00000555562.1	1077	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACTGTATTGGTTATTAG	89417090	True	NA	NA	False	NA	NA	NA	89417353	89419793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89417797_89419159
transcript_44969.known	chr14	-	2716	6	FSM	ENSG00000140025.16	ENST00000555872.5	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	49.8397431775084	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTAGCTGGGCGTGGTGGC	-89951751	False	NA	NA	False	AATACA	-14	NA	89954557	89795146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_44972.known	chr14	-	568	6	FSM	ENSG00000140025.16	ENST00000556609.5	568	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	51.4291745996375	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTTAATTTTTGTG	NA	False	NA	-16	True	ATTAAA	-6	NA	89954777	89797136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954732
transcript_44974.known	chr14	-	1856	6	FSM	ENSG00000140025.16	ENST00000556005.1	1856	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	62.2626693934656	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATTTTCACATGTGATAT	-89951717	False	NA	NA	False	NA	NA	NA	89954523	89923325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954354
transcript_44978.known	chr14	-	3136	6	FSM	ENSG00000140025.16	ENST00000316738.12	3136	6	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	9.48683298050514	636	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGATCAATGGTATCATTG	-89951924	True	NA	NA	False	AATAAA	-20	NA	89954730	89794668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89797325_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_44979.known	chr14	-	1870	6	FSM	ENSG00000140025.16	ENST00000538485.6	1870	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	50.5750926840476	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTGAATAAAACTGTACT	-89951944	False	NA	NA	False	NA	NA	NA	89954750	89923307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_89924678_89931540_89931632_89932525_89932628_89950096_89950143_89953905_89954002_89954585
transcript_4498.known	chr1	-	545	4	FSM	ENSG00000043514.17	ENST00000541099.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	69.8442712197802	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGGATCCAGTTCAGGAG	-39880681	True	NA	NA	False	NA	NA	NA	39883434	39841713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_39841914_39844100_39844219_39844530_39844641_39883317
transcript_44983.known	chr14	+	3722	17	FSM	ENSG00000042088.14	ENST00000335725.9	3722	17	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	118.580141676421	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATTTAACCAGTTGATTT	89950090	True	NA	18	True	AATAAA	-18	NA	89955926	90044764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89955971_89956577_89956801_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_44991.known	chr14	+	2068	16	FSM	ENSG00000042088.14	ENST00000393454.6	2068	16	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	79.1773255982348	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTTATATGTTTTGGAAA	89950101	True	NA	7	True	AATAAA	-19	NA	89955937	90043344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89955971_89963107_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90033105_90033215_90043069
transcript_4500.known	chr1	+	785	2	FSM	ENSG00000236546.1	ENST00000418255.1	785	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCATGATTGGCTGATTAC	NA	False	NA	NA	False	AATAAA	-30	NA	39897744	39899098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39898067_39898635
transcript_45007.known	chr14	+	1894	14	FSM	ENSG00000042088.14	ENST00000555880.5	1894	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	126.872763920599	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACATTCCTAATAAAGTA	89963080	False	NA	-28	True	NA	NA	NA	89963104	90043309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_89963674_89966146_89966191_89967366_89967423_89971174_89971272_89975780_89975816_89980539_89980633_89984515_89984684_89985131_89985211_89988904_89989091_89989716_89989766_89991916_89991984_89993375_89993484_90019315_90019419_90043069
transcript_45008.known	chr14	-	14008	14	FSM	ENSG00000119720.18	ENST00000354366.8	14008	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	5.92757072286415	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTTGAGTCTGTCTTGG	-90330602	True	NA	-6	True	AATAAA	-14	NA	90331941	90267859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90278462_90279061_90279134_90286353_90286493_90288216_90289146_90290220_90290608_90292696_90292873_90298259_90298381_90301238_90301373_90302719_90303126_90303934_90304383_90312393_90312544_90316577_90316812_90318004_90318114_90331840
transcript_4502.known	chr1	+	2129	14	FSM	ENSG00000168389.18	ENST00000372811.10	2129	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_5	8.29771480625342	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCTGTTTCTGTCTGTG	39953142	True	NA	12	True	CATAAA	-13	NA	39955144	39969956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39967627_39967712_39967803_39967917_39968333_39968478_39968568_39968746_39969504
transcript_45020.known	chr14	+	4390	11	FSM	ENSG00000100764.14	ENST00000261303.13	4390	11	0	0	0	0	multi-exon	FALSE	canonical	3	1037	junction_1	274.025546254359	3692	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACATCAGTATTGCCTTTT	90241228	True	NA	NA	False	ATTAAA	-18	NA	90256552	90275429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90256601_90259159_90259214_90260114_90260212_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_45029.known	chr14	+	1389	10	FSM	ENSG00000100764.14	ENST00000543772.2	1389	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	616.511772338614	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGCCCATTGGGTGGCC	90241253	True	NA	NA	False	AAAACA	-27	NA	90256577	90272550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90256601_90259159_90259214_90263317_90263443_90263661_90263848_90264040_90264170_90265069_90265167_90268223_90268414_90269396_90269549_90270197_90270353_90272272
transcript_45045.known	chr14	-	580	4	FSM	ENSG00000119720.18	ENST00000557106.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.5193489244852	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACCGAAGTAGGTTGCTG	-90330630	True	NA	NA	False	AGTAAA	-12	NA	90331969	90316586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90316812_90317703_90317821_90318004_90318114_90331840
transcript_45046.nic	chr14	-	360	3	ISM	ENSG00000119720.18	ENST00000354366.8	14008	14	-63	48865	-35	-138	5prime_fragment	FALSE	canonical	3	27	junction_1	5	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAAGGAAGCATCAGC	NA	False	NA	NA	False	AAAAAG	-39	NA	90332004	90316724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_90316812_90318004_90318114_90331840
transcript_4505.known	chr1	+	1929	12	FSM	ENSG00000168389.18	ENST00000483824.5	1929	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	18.66627311667	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCTGTGTCCTCAGCCA	39953155	True	NA	22	True	CATAAA	-23	NA	39955157	39969966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_39955386_39957086_39957222_39958700_39958826_39965210_39965335_39965470_39965550_39965856_39966015_39966600_39966692_39966810_39966933_39967085_39967170_39968333_39968478_39968568_39968746_39969504
transcript_45050.known	chr14	+	1104	7	FSM	ENSG00000198668.14	ENST00000447653.8	1104	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	3680.97381438964	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATGAAAAATGAAAAAA	90321617	True	NA	-19	True	NA	NA	NA	90397028	90405072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397234_90398990_90399088_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_45053.known	chr14	+	4203	6	FSM	ENSG00000198668.14	ENST00000356978.9	4203	6	0	0	0	0	multi-exon	FALSE	canonical	3	7896	junction_5	449.510222353174	19274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGAACTGTGTAGGTTTC	90321617	True	NA	39	True	AATAAA	-26	NA	90397028	90408268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_45060.known	chr14	+	1064	6	FSM	ENSG00000198668.14	ENST00000544280.6	1064	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	3332.5810657807	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAAATGGGTTCTAGTTCA	90398249	False	NA	16	True	ATTAAA	-33	NA	90398261	90405107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90398489_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_45063.known	chr14	+	877	6	FSM	ENSG00000198668.14	ENST00000553542.5	877	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	3312.26224807155	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCACAGTCAGGCCTTTG	90321644	True	NA	-43	True	AATACA	-43	NA	90397055	90405048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397155_90400064_90400096_90401258_90401403_90403861_90403969_90404378_90404515_90404688
transcript_45064.known	chr14	+	1420	5	FSM	ENSG00000198668.14	ENST00000553630.1	1420	5	0	0	0	0	multi-exon	FALSE	canonical	1	94	junction_3	3719.32984555014	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTAAAGTGGTGTTAAATG	90321628	True	NA	57	True	AATAAA	-11	NA	90397039	90405603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90397234_90400064_90400096_90401258_90401403_90404378_90404515_90404688
transcript_45065.known	chr14	+	459	1	FSM	ENSG00000213315.5	ENST00000472287.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	90766530	90766989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_90766500_90767000
transcript_45067.known	chr14	-	703	4	FSM	ENSG00000258884.3	ENST00000659138.2	706	4	3	0	3	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAATGCCTTCTTACTCTTG	-90828171	True	NA	NA	False	NA	NA	NA	90828199	90820063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90820366_90821686_90821745_90823021_90823154_90827988
transcript_45068.known	chr14	-	2993	17	FSM	ENSG00000100784.12	ENST00000536315.6	2993	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	6.25968000380211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGATAT	-91059588	False	546	NA	False	ATTAAA	-17	NA	91060134	90871503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90872323_90873631_90873796_90875200_90875361_90890486_90890679_90894412_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060017
transcript_45071.known	chr14	-	2249	13	FSM	ENSG00000100784.12	ENST00000418736.6	2249	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	5.23542951649836	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTAAAGAGTTGTCTTGG	-91060054	True	NA	NA	False	AATAAA	-24	NA	91060600	90893973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_90894584_90899328_90899423_90900107_90900242_90900610_90900737_90902807_90902970_90906148_90906300_90920205_90920310_90923112_90923197_90943077_90943186_90947434_90947551_90978305_90978525_91001087_91001160_91060331
transcript_45078.known	chr14	+	2957	14	FSM	ENSG00000133943.21	ENST00000256324.15	2957	14	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	18.9146322620734	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGAAAGTCTTTTTTTTTG	91113578	True	NA	NA	False	CATAAA	-21	NA	91114072	91225632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114284_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_45080.nic	chr14	+	2636	14	NIC	ENSG00000133943.21	novel	2764	16	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	20.4999639197258	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91113867	False	NA	23	True	AATAAA	-19	NA	91114361	91225355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170202_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_45086.known	chr14	+	959	7	FSM	ENSG00000133943.21	ENST00000518665.6	959	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	45.7192519623845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	91113592	False	NA	3	True	AATAAA	-19	NA	91114086	91167721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114284_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167468
transcript_45088.known	chr14	+	834	7	FSM	ENSG00000133943.21	ENST00000519019.5	834	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	45.8318181567735	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGCATTACCAACACCCA	91113601	True	NA	-11	True	AATAAA	-5	NA	91114387	91167707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91167523
transcript_45096.nic	chr14	+	758	5	NIC	ENSG00000133943.21	novel	834	7	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	45.6097577279248	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCCAGAGACAGAGATATT	91113867	False	NA	3	True	AATAAA	-19	NA	91114361	91167721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91167468
transcript_45105.nic	chr14	+	439	3	ISM	ENSG00000133943.21	ENST00000523837.5	2814	16	-57	64924	0	62	5prime_fragment	FALSE	canonical	3	36	junction_1	34.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAGAAAGTTCCT	91113568	True	NA	NA	False	NA	NA	NA	91114062	91160431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_91114284_91157638_91157691_91160265
transcript_45106.known	chr14	+	622	3	FSM	ENSG00000133943.21	ENST00000521081.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	38.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAGAAATACATCCAGCAT	91113568	True	NA	NA	False	AAGAAA	-7	NA	91114062	91160369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91157638_91157691_91160265
transcript_45108.known	chr14	+	2764	16	FSM	ENSG00000133943.21	ENST00000523816.5	2764	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	37.636861364005	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTACTCTTCGGAATAT	91113603	True	NA	23	True	AATAAA	-19	NA	91114389	91225355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91145220_91145314_91147780_91147859_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_45109.known	chr14	+	2538	14	FSM	ENSG00000133943.21	ENST00000428926.6	2538	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.7253701934239	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGTACTCTTCGGAA	91113655	False	NA	20	True	AATAAA	-16	NA	91114441	91225352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91114529_91157638_91157691_91160265_91160398_91167224_91167379_91170002_91170187_91173288_91173440_91175933_91176057_91181185_91181390_91188909_91189171_91196374_91196475_91199756_91199906_91204705_91204826_91215404_91215557_91224683
transcript_45111.known	chr14	-	420	4	FSM	ENSG00000015133.20	ENST00000554165.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.3360653902262	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGATGAATTTACATCAT	-91417647	False	NA	NA	False	NA	NA	NA	91417678	91384389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91384552_91408658_91408768_91416737_91416839_91417630
transcript_45112.known	chr14	-	7519	30	FSM	ENSG00000015133.20	ENST00000389857.11	7519	30	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_23	23.5490229177454	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCGTTCTGGCTTTCCTCA	-91414898	True	NA	-16	True	AATAAA	-17	NA	91417820	91271322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91273654_91277921_91278212_91279237_91279307_91281456_91281526_91283328_91283518_91289104_91289344_91290994_91291085_91294172_91294319_91297304_91297492_91299926_91300071_91303700_91303979_91305764_91305927_91307037_91307227_91308350_91308493_91309858_91309987_91313079_91314151_91315649_91315788_91321119_91321305_91324778_91324924_91325909_91326057_91338004_91338164_91338488_91338571_91339277_91339463_91339883_91340025_91342379_91342464_91343598_91343658_91359641_91359712_91408658_91408768_91416737_91416839_91417630
transcript_45113.known	chr14	-	550	4	FSM	ENSG00000015133.20	ENST00000553437.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTCATCTTTTGTCTCC	-91408727	False	NA	NA	False	AATAAA	-42	NA	91408758	91342142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91342464_91343598_91343658_91359641_91359712_91408658
transcript_45114.known	chr14	+	303	2	FSM	ENSG00000258798.1	ENST00000557524.1	303	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTCTCTTCCTCATCT	91418251	False	NA	NA	False	CATAAA	-20	NA	91418265	91421176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_91418341_91420948
transcript_45117.known	chr14	-	580	4	FSM	ENSG00000100796.18	ENST00000554511.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	250.815115617505	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATTTTTTAAATAAAAAA	-91506703	True	NA	NA	False	AAAAAG	-36	NA	91510300	91485631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91485731_91490746_91490803_91509505_91509705_91510074
transcript_45119.known	chr14	-	3751	12	FSM	ENSG00000165929.13	ENST00000360594.9	3751	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	7.2738635475991	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCTTTCAGGTACAGAAGT	-91836065	True	NA	-1	True	AATAAA	-31	NA	91836447	91780954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91792366_91792559_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_45124.known	chr14	-	1770	11	FSM	ENSG00000165929.13	ENST00000556018.5	1770	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	24.9889975789346	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATATCAACCATAGATAG	NA	False	NA	-18	True	AATAAA	-15	NA	91836526	91782822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91783211_91785161_91785362_91787512_91787628_91797784_91797902_91798298_91798400_91798988_91799065_91800280_91800373_91802253_91802422_91812311_91812546_91813702_91813826_91836370
transcript_45129.known	chr14	-	2625	11	FSM	ENSG00000140092.15	ENST00000342058.9	2625	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	3.85227205685164	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTGTTTGGTTCATTTT	-91947497	True	NA	-1	True	ATTAAA	-13	NA	91947694	91869410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91870386_91877486_91877683_91881291_91881419_91882953_91883077_91887192_91887313_91891220_91891338_91894949_91895073_91936946_91937202_91940564_91940617_91942906_91942962_91947212
transcript_45131.known	chr14	-	9996	21	FSM	ENSG00000100815.12	ENST00000267622.8	9996	21	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_15	11.0103360530004	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGACTTTTTCTTTAG	-92036937	True	NA	-1	True	AATAAA	-19	NA	92040059	91965990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_91969894_91972716_91972862_91974626_91974744_91975171_91975287_91976107_91976190_91988283_91988384_91993808_91993913_91995351_91995516_91999239_91999434_91999967_92000109_92003418_92006449_92007639_92007853_92010985_92011073_92011754_92011796_92014214_92014578_92015695_92015862_92017681_92017751_92021555_92021832_92025309_92025421_92033191_92033254_92039546
transcript_45137.known	chr14	-	769	3	FSM	ENSG00000100815.12	ENST00000555105.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	31.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACATGCCTGTAATCCC	-92036895	True	NA	NA	False	AATACA	-18	NA	92040017	92030540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92030777_92033191_92033254_92039546
transcript_45143.known	chr14	-	1205	10	FSM	ENSG00000066427.25	ENST00000340660.10	1205	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	78.7204775153639	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102984	True	NA	-10	True	ATTAAA	-14	NA	92106610	92064093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_45148.known	chr14	-	6713	9	FSM	ENSG00000066427.25	ENST00000429774.6	6713	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	79.4369836725942	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTTTGAATTTGTGTT	-92102995	True	NA	-10	True	AATAAA	-20	NA	92106621	92058551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92106528
transcript_45154.known	chr14	-	857	9	FSM	ENSG00000066427.25	ENST00000555958.5	857	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	102.244498629511	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92071054_92080952_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92106528
transcript_45156.known	chr14	-	1259	8	FSM	ENSG00000066427.25	ENST00000502250.5	1259	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	83.3820809800968	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTATCTCTACTTTCC	-92102956	True	NA	NA	False	NA	NA	NA	92106582	92063880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92106528
transcript_4516.known	chr1	+	2964	13	FSM	ENSG00000131236.18	ENST00000372802.5	2964	13	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	791.309160505551	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATATGCAACTTTTTTTT	40040218	True	NA	-78	True	NA	NA	NA	40040239	40072515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40040784_40059333_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_45162.known	chr14	-	803	8	FSM	ENSG00000066427.25	ENST00000555381.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	80.9368612574276	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGCCTGCTCACCATTC	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92106528
transcript_45174.known	chr14	-	1315	10	FSM	ENSG00000066427.25	ENST00000503767.5	1315	10	0	0	0	0	multi-exon	TRUE	canonical	1	18	junction_8	70.427267446636	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTCTAAATGTTTCTTTT	-92102974	True	NA	-10	True	ATTAAA	-14	NA	92106600	92064093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92064415_92070934_92071054_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096673_92096839_92106528
transcript_45175.known	chr14	-	1064	11	FSM	ENSG00000066427.25	ENST00000554491.5	1064	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.7512273823955	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGTAAGGCCTGCTCACCA	-92102948	True	NA	NA	False	NA	NA	NA	92106574	92070937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92071054_92079414_92079469_92080964_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_45176.known	chr14	-	936	10	NNC	ENSG00000066427.25	novel	6950	12	NA	NA	0	-3	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	77.9982589232717	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTAAAGTAGTTGGTACA	-92102995	True	NA	NA	False	NA	NA	NA	92106621	92080967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_92080995_92080996_92081062_92082299_92082467_92083125_92083259_92088729_92088818_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_45177.known	chr14	-	591	6	FSM	ENSG00000066427.25	ENST00000511362.5	591	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	93.9093179615314	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGCATGTAGGGAGGCTG	-92102941	True	NA	NA	False	GATAAA	-43	NA	92106567	92090378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92090568_92093251_92093319_92093745_92093832_92096092_92096138_92096673_92096839_92106528
transcript_45186.known	chr14	-	454	4	FSM	ENSG00000183648.11	ENST00000553514.5	454	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1243.50374167332	3244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTCTTTTCATACAAAG	-92108475	True	NA	-3	True	AATAAA	-20	NA	92121724	92116121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92116230_92117497_92117643_92118848_92118967_92121641
transcript_45199.known	chr14	-	458	3	FSM	ENSG00000183648.11	ENST00000555441.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	1325	2641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCTTTCTTTTCATAC	-92121392	False	NA	-7	True	AATAAA	-16	NA	92121404	92116125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92116230_92117497_92117643_92121195
transcript_4520.known	chr1	+	2592	13	FSM	ENSG00000131236.18	ENST00000340450.7	2592	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	620.95777276362	1790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTGCTTAGTTGTTTAC	40000161	True	NA	17	True	AATAAA	-10	NA	40040752	40072641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40040802_40059336_40059459_40060069_40060171_40061734_40061813_40064226_40064371_40064473_40064560_40066214_40066321_40067539_40067718_40069689_40069875_40070158_40070283_40070429_40070513_40070835_40070980_40071449
transcript_45201.known	chr14	+	13003	16	FSM	ENSG00000165934.13	ENST00000298875.9	13003	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.593495612497	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGACTGTGTATAGT	92117922	True	NA	1	True	AATAAA	-16	NA	92121968	92172145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357_92154459_92155122_92155324_92156478_92156632_92157658_92157885_92158982_92159283_92161111_92161247_92161651
transcript_45209.nic	chr14	+	1467	10	ISM	ENSG00000165934.13	ENST00000298875.9	13003	16	-20	17734	-20	-742	5prime_fragment	FALSE	canonical	0	0	junction_1	62.7294799462022	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAACTAAAGAAAGAAGC	92117902	True	NA	NA	False	NA	NA	NA	92121948	92154411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010_92134171_92134249_92134356_92135366_92135497_92138231_92138348_92142163_92142352_92143003_92143295_92154357
transcript_45211.nic	chr14	+	615	4	ISM	ENSG00000165934.13	ENST00000298875.9	13003	16	-20	37942	-20	100	5prime_fragment	FALSE	canonical	0	0	junction_1	96.8813707582629	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTCAGTGATTGTTTTT	92117902	True	NA	NA	False	ATTAAA	-16	NA	92121948	92134203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_92122129_92126121_92126181_92130950_92131134_92134010
transcript_45213.known	chr14	+	715	4	FSM	ENSG00000165934.13	ENST00000553427.5	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	92.167721512951	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGCTATCTATGCAACCA	92117925	True	NA	NA	False	NA	NA	NA	92121971	92134103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_92122352_92126121_92126181_92130950_92131134_92134010
transcript_45215.known	chr14	-	1980	14	FSM	ENSG00000100600.15	ENST00000334869.9	1980	14	0	0	0	0	multi-exon	FALSE	canonical	3	388	junction_3	51.6643697396157	785	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCACGTCCGACACTGAC	-92745152	True	NA	-14	True	AATAAA	-21	NA	92748627	92703808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92704639_92704708_92706482_92706654_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_45218.known	chr14	-	1797	13	FSM	ENSG00000100600.15	ENST00000557434.5	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	137.562006221033	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATAAAGATTTATAAC	-92745170	True	NA	-44	True	NA	NA	NA	92748645	92703838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92704639_92704708_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_45220.known	chr14	-	1728	12	FSM	ENSG00000100600.15	ENST00000555699.5	1728	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	138.176435301853	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGTCCGACACTGACTT	-92745137	True	NA	-12	True	AATAAA	-23	NA	92748612	92703806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92704362_92709671_92709873_92711658_92711749_92711836_92711956_92712804_92712872_92713822_92713886_92714375_92714452_92716135_92716222_92717379_92717462_92718746_92718845_92732648_92732816_92748488
transcript_45229.known	chr14	+	2879	13	FSM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	18.6607133363712	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCTTTTCTAAAATAAT	92790545	True	NA	NA	False	AATAAA	-14	NA	92794304	92839947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_92794457_92797407_92797982_92806735_92806964_92809299_92809520_92810253_92810378_92811550_92811755_92816250_92816422_92819707_92819837_92824545_92824645_92833121_92833348_92835558_92835665_92837385_92837450_92839365
transcript_45234.nic	chr14	+	1336	3	ISM	ENSG00000066455.13	ENST00000163416.7	2879	13	0	32602	0	-3358	5prime_fragment	FALSE	canonical	3	199	junction_2	24.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAACTGTTAGAAATAT	92790545	True	NA	NA	False	AATAAA	-36	NA	92794304	92807345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_92794457_92797407_92797982_92806735
transcript_45236.nic	chr14	+	1115	2	ISM	ENSG00000066455.13	ENST00000163416.7	2879	13	3	41574	3	-12330	5prime_fragment	FALSE	canonical	3	248	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTATTTTCTGGGTTGTGTT	92790548	True	NA	NA	False	TATAAA	-23	NA	92794307	92798373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_92794457_92797407
transcript_45237.nic	chr14	+	1284	2	ISM	ENSG00000066455.13	ENST00000163416.7	2879	13	-88	41496	-88	-12252	5prime_fragment	FALSE	canonical	3	248	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGTTGAAGAGTTGAAG	92794203	False	NA	NA	False	AATAAA	-21	NA	92794216	92798451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_92794457_92797407
transcript_45240.known	chr14	-	6188	11	FSM	ENSG00000100605.17	ENST00000267615.11	6188	11	0	0	0	0	multi-exon	TRUE	canonical	3	97	junction_10	100.874625154198	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGTGTCCTTCTGTGC	NA	False	NA	0	True	AATAAA	-18	NA	93115925	92936913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_92941905_92946330_92946494_92951945_92952014_92958200_92958367_92962354_92962396_92962750_92962850_92993879_92993998_93016675_93016802_93076594_93076620_93115068_93115306_93115771
transcript_45243.known	chr14	-	2407	3	FSM	ENSG00000165943.5	ENST00000298894.5	2407	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-93184012	True	NA	-22	True	AATAAA	-16	NA	93184897	93182198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93184363_93184558_93184714_93184809
transcript_45244.known	chr14	-	2529	2	FSM	ENSG00000165943.5	ENST00000556883.1	2529	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTTGTCTGTTTTGTTT	-93184038	True	NA	-22	True	AATAAA	-16	NA	93184923	93182198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93184363_93184558
transcript_45245.known	chr14	+	1276	10	FSM	ENSG00000012963.15	ENST00000553674.1	1276	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	88.1564266265118	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCCTTTCCGTCCTCCTCT	NA	False	NA	21	True	AATAAA	-22	NA	93207242	93227118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93207442_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_45248.known	chr14	+	2373	2	FSM	ENSG00000153485.6	ENST00000415050.3	2373	2	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTAGCATTTCTTTTCT	93183724	False	NA	NA	False	AATACA	-18	NA	93185316	93188463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93185486_93186259
transcript_45250.known	chr14	-	1125	2	FSM	ENSG00000170270.5	ENST00000306954.5	1125	2	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	0	1267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTGTGTGTGTTTCTT	NA	False	NA	-3	True	AATATA	-14	NA	93207065	93202893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93203783_93206829
transcript_45251.known	chr14	-	398	2	FSM	ENSG00000170270.5	ENST00000556566.1	398	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTTTTCTTGAGAAATAA	NA	False	NA	NA	False	AATAAA	-2	NA	93207029	93203505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93203783_93206908
transcript_45252.known	chr14	+	909	2	FSM	ENSG00000153485.6	ENST00000283534.4	909	2	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	0	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGGCTTGCTTTAAAA	93183358	True	NA	7	True	CATAAA	-18	NA	93184950	93187086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93185033_93186259
transcript_45253.known	chr14	+	3494	11	FSM	ENSG00000012963.15	ENST00000013070.11	3494	11	0	0	0	0	multi-exon	TRUE	canonical	3	254	junction_2	18.3847763108502	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCTTTTCAGATTGTTTT	NA	False	NA	19	True	AATAAA	-15	NA	93207255	93229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93207442_93209823_93209958_93210647_93210709_93212031_93212128_93214928_93214983_93215175_93215282_93218526_93218736_93219211_93219362_93220248_93220412_93222312_93222375_93226942
transcript_45254.known	chr14	-	2621	4	FSM	ENSG00000011114.15	ENST00000298896.7	2621	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6.0184900284226	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATGGCTCTTGTGGTGC	NA	False	NA	-2	True	ATTAAA	-19	NA	93333092	93287627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93288708_93293857_93294938_93295969_93296158_93332819
transcript_45256.nic	chr14	+	1475	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210799	-368	-553	0	3prime_fragment	FALSE	canonical	2	5	junction_1	4.38178046004133	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	93688439	93707272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_45257.nic	chr14	+	2079	6	ISM	ENSG00000133958.13	ENST00000621021.1	7377	47	210799	-972	-553	0	3prime_fragment	FALSE	canonical	2	5	junction_1	4.38178046004133	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTGAGCCTGGGGTTT	NA	False	NA	22	True	ATTAAA	-15	NA	93688439	93707876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_45259.nnic	chr14	+	540	2	NNC	ENSG00000133958.13	novel	8400	50	NA	NA	-37	-308924	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTTAGTCAATTTCAAGT	NA	False	NA	NA	False	AATAAA	-21	NA	93333181	93397980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_93333524_93397782
transcript_45260.known	chr14	+	8400	50	FSM	ENSG00000133958.13	ENST00000256339.8	8400	50	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.50711776991615	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTAGTGTTTTTTCTT	NA	False	NA	NA	False	AATAAA	-15	NA	93333218	93707272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_93333524_93467670_93467792_93474247_93474394_93477557_93477729_93487662_93487756_93496410_93496467_93497156_93497287_93523977_93524043_93528557_93528647_93529285_93529327_93532549_93532579_93537988_93538219_93540659_93540832_93542465_93542697_93571893_93572085_93572692_93572817_93575057_93575199_93577841_93578064_93580148_93580377_93582202_93582345_93586595_93586676_93586759_93586909_93593679_93593838_93597358_93597541_93600568_93600771_93603238_93603419_93612796_93613084_93617121_93617305_93618191_93618355_93621620_93622842_93630800_93630909_93634520_93634638_93637215_93637300_93641144_93641248_93643556_93643698_93646607_93646647_93653741_93653855_93653939_93654026_93655233_93655408_93659192_93659262_93662603_93662715_93673350_93673456_93682616_93682695_93686571_93686662_93688664_93688841_93690116_93690304_93691748_93691947_93694334_93694413_93704624_93704667_93706703
transcript_45261.nnic	chr14	+	677	2	NIC	ENSG00000133958.13	novel	8400	50	NA	NA	-57	-358562	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGTGCTTGGTAATATGTG	NA	False	NA	NA	False	AATAAA	-14	NA	93333161	93348342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_93333524_93348027
transcript_45262.known	chr14	-	2168	3	FSM	ENSG00000100628.12	ENST00000553883.1	2168	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGCCCAGTGAAGTCC	NA	False	NA	-8	True	AATAAA	-14	NA	93940495	93934166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_93934793_93937697_93937852_93939107
transcript_45266.known	chr14	-	2769	9	FSM	ENSG00000089737.18	ENST00000555054.1	2769	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	245.973544055047	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGTTAAACTTGATTTC	-94072811	True	NA	19	True	NA	NA	NA	94081202	94050964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079622_94081118
transcript_45267.known	chr14	-	5573	9	FSM	ENSG00000089737.18	ENST00000621632.5	5573	9	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_8	78.8336856933633	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCAAAGCAACTCTCCT	-94072811	True	NA	NA	False	AATAAA	-20	NA	94081202	94048286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94079024_94079748_94081118
transcript_45277.known	chr14	+	3911	6	FSM	ENSG00000089723.10	ENST00000203664.10	3911	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	3.54400902933387	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTGTCCTGGCTTCT	NA	False	NA	5	True	ATTAAA	-14	NA	94026339	94048930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94026541_94037379_94037476_94038962_94039082_94043970_94044056_94044585_94044781_94045715
transcript_45284.known	chr14	+	708	3	FSM	ENSG00000089723.10	ENST00000553723.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTGCCCCGGTGTTCTGC	NA	False	NA	NA	False	AAAAAG	-3	NA	94026377	94039411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94026541_94037379_94037476_94038962
transcript_45289.known	chr14	-	810	2	FSM	ENSG00000089737.18	ENST00000555324.1	810	2	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_1	0	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCAGATAATTGGGAGAGA	-94072755	True	NA	NA	False	NA	NA	NA	94081146	94078965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94079748_94081118
transcript_45290.known	chr14	-	2214	8	FSM	ENSG00000089737.18	ENST00000544005.5	2214	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	263.137505762245	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATTGTGTCATCCTGAT	-94072811	True	NA	-20	True	ATTAAA	-13	NA	94081202	94050922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94051463_94052997_94053128_94054995_94055185_94057821_94057898_94060097_94060614_94060912_94061067_94062096_94062622_94081118
transcript_45298.known	chr14	+	615	6	FSM	ENSG00000165948.11	ENST00000554166.5	615	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62.5395874626624	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGGCTGGGTTCACCC	94080324	True	NA	NA	False	GGGGCT	-19	NA	94081355	94102536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94101976_94102476
transcript_45299.known	chr14	+	804	6	FSM	ENSG00000165948.11	ENST00000556381.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	61.1764660633483	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGACAAGTCTCCTACTC	94080324	True	NA	-46	True	NA	NA	NA	94081355	94102641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94097491_94097679_94100738_94100772_94101813_94102060_94102476
transcript_45301.known	chr14	+	629	6	FSM	ENSG00000165948.11	ENST00000555341.5	629	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	57.5951386837466	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGGTTCACCCCCTTC	94080343	True	NA	NA	False	GGGGCT	-24	NA	94081374	94102541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096855_94096966_94097494_94097679_94100738_94100772_94101813_94101976_94102476
transcript_45309.known	chr14	+	647	6	FSM	ENSG00000165948.11	ENST00000553664.1	647	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	72.4419767814214	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTAGTGTCGGTTCTCTG	94080333	True	NA	21	True	AATAAA	-16	NA	94081364	94102708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94088247_94088304_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_45315.known	chr14	+	647	5	FSM	ENSG00000165948.11	ENST00000555523.6	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	18.3507493035026	1012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080278	True	NA	22	True	AATAAA	-17	NA	94081309	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94101976_94102476
transcript_45316.nic	chr14	+	770	5	NIC	ENSG00000165948.11	novel	647	5	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	61.2107016787097	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081270	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_94081450_94096886_94096966_94100738_94100772_94101813_94102060_94102476
transcript_45322.known	chr14	+	674	5	FSM	ENSG00000165948.11	ENST00000393115.7	674	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8540051933062	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080297	True	NA	22	True	AATAAA	-17	NA	94081328	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096840_94096966_94100738_94100772_94101813_94101976_94102476
transcript_45323.nic	chr14	+	795	5	NIC	ENSG00000165948.11	novel	674	5	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	63.5270611629406	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94081276	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_94081450_94096855_94096966_94100738_94100772_94101813_94102060_94102476
transcript_45330.known	chr14	+	413	4	FSM	ENSG00000165948.11	ENST00000557218.5	413	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	70.8864506721058	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080350	True	NA	22	True	AATAAA	-17	NA	94081381	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94100738_94100772_94102476
transcript_45343.known	chr14	+	828	3	FSM	ENSG00000165948.11	ENST00000557600.5	828	3	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	23	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTCTGGAGATTTTGGG	94080279	True	NA	NA	False	AAAACA	-36	NA	94081310	94101348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096886_94096966_94100738
transcript_45346.known	chr14	+	406	3	FSM	ENSG00000165948.11	ENST00000554544.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	28	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	94080355	True	NA	22	True	AATAAA	-17	NA	94081386	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94081450_94096855_94096966_94102476
transcript_45347.known	chr14	+	571	4	FSM	ENSG00000165948.11	ENST00000554562.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	69.8188131284589	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTAGTGTCGGTTCTCTGT	NA	False	NA	22	True	AATAAA	-17	NA	94096906	94102709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94096966_94100738_94100772_94101813_94102060_94102476
transcript_45353.nnic	chr14	+	823	6	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	-21	0	multi-exon	FALSE	canonical	1	1	junction_3	49.2316971066406	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCCAGAATCTCTTCT	NA	False	NA	3	True	AATAAA	-16	NA	94081279	94116690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94096886_94096966_94104901_94105035_94114850_94114881_94115780_94115943_94116441
transcript_45357.nnic	chr14	+	690	5	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	-21	0	multi-exon	FALSE	canonical	1	1	junction_2	52.8032906171576	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCCAGAATCTCTTCT	NA	False	NA	3	True	AATAAA	-16	NA	94081279	94116690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94096886_94096966_94114850_94114881_94115780_94115943_94116441
transcript_45358.nnic	chr14	+	714	5	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	-14	0	multi-exon	FALSE	canonical	1	1	junction_2	23.9374184071716	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCCAGAATCTCTTCT	NA	False	NA	3	True	AATAAA	-16	NA	94081286	94116690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94096855_94096966_94114850_94114881_94115780_94115943_94116441
transcript_45359.nnic	chr14	+	660	4	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	413	4	NA	NA	-21	0	multi-exon	FALSE	canonical	0	0	junction_2	58.7593964116946	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCCAGAATCTCTTCT	NA	False	NA	3	True	AATAAA	-16	NA	94081279	94116690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94096886_94096966_94115780_94115943_94116441
transcript_45360.nnic	chr14	+	550	4	Fusion	ENSG00000165948.11_ENSG00000165949.13	novel	666	4	NA	NA	12	0	multi-exon	FALSE	canonical	1	3	junction_1	3.2659863237109	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTCCCAGAATCTCTTCT	94080309	True	NA	3	True	AATAAA	-16	NA	94081340	94116690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr14_+_94081450_94114850_94114881_94115780_94115943_94116441
transcript_45365.known	chr14	-	451	4	FSM	ENSG00000119632.4	ENST00000238609.4	451	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_3	45.7626728046147	4414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCCTGTTTTGCTTCTTG	-94126072	True	NA	-10	True	AATAAA	-18	NA	94129604	94127780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94127993_94128513_94128676_94129261_94129292_94129557
transcript_45368.known	chr14	-	516	3	FSM	ENSG00000119632.4	ENST00000555558.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	14	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTTTTGCTTCTTGCA	-94125869	False	NA	-8	True	AATAAA	-20	NA	94129401	94127778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94127993_94128513_94128676_94129261
transcript_45370.known	chr14	-	1486	5	FSM	ENSG00000186910.4	ENST00000334708.4	1486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.08972473588517	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGGAGCAATCCTTAC	-94452755	False	NA	-25	True	AATAAA	-22	NA	94452800	94442463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_94442810_94443077_94443226_94446330_94446605_94448131_94448778_94452728
transcript_45372.known	chr14	+	2278	6	FSM	ENSG00000188488.14	ENST00000329597.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	2.41660919471891	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTATAACTGTCTTTATGGA	94581273	True	NA	9	True	AATAAA	-18	NA	94581425	94593118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94581491_94581614_94581711_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_45373.known	chr14	+	2211	5	FSM	ENSG00000188488.14	ENST00000554866.5	2211	5	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_2	2.73861278752583	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTATAACTGTCTTTAT	94581241	True	NA	6	True	AATAAA	-15	NA	94581393	94593115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_94581491_94587345_94587982_94590040_94590312_94590748_94590897_94592056
transcript_45377.nic	chr14	+	757	5	NIC	ENSG00000235706.9	novel	817	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	10.7558123821495	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95156994	True	NA	10	True	AATAAA	-23	NA	95157621	95179933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158192_95158235_95158875_95159036_95179498_95179634_95179750
transcript_45379.nic	chr14	+	752	5	NIC	ENSG00000235706.9	novel	817	4	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_4	5.1234753829798	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95156994	True	NA	10	True	AATAAA	-23	NA	95157621	95179933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503_95179634_95179750
transcript_45380.nnic	chr14	+	624	5	NNC	ENSG00000235706.9	novel	817	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	15.204851199535	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95156994	True	NA	10	True	AATAAA	-23	NA	95157621	95179933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_95157859_95158192_95158235_95159008_95159036_95179498_95179634_95179750
transcript_45385.known	chr14	+	810	4	FSM	ENSG00000235706.9	ENST00000439819.6	817	4	0	7	0	0	multi-exon	FALSE	canonical	3	22	junction_2	8.73053390247253	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157050	True	NA	2	True	AATAAA	-15	NA	95157677	95179925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179498
transcript_45386.known	chr14	+	723	4	FSM	ENSG00000235706.9	ENST00000435343.2	817	4	83	11	75	0	multi-exon	FALSE	canonical	2	14	junction_3	4.02768199119819	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157132	True	NA	2	True	AATAAA	-15	NA	95157759	95179925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95157859_95158192_95158235_95158875_95159036_95179503
transcript_4539.known	chr1	-	2253	9	FSM	ENSG00000131238.18	ENST00000641691.1	2253	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	524.567664248379	1220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-40082201	True	NA	-43	True	NA	NA	NA	40097254	40072737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092501_40097114
transcript_45397.nnic	chr14	+	915	4	NNC	ENSG00000235706.9	novel	817	4	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_1	16.3367343397905	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157050	True	NA	2	True	AATAAA	-15	NA	95157677	95179925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_95157859_95158087_95158235_95158875_95159036_95179498
transcript_45401.nnic	chr14	+	707	3	NIC	ENSG00000235706.9	novel	817	4	NA	NA	-23	0	intron_retention	FALSE	canonical	0	0	junction_2	11.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTTTTGGGCTGTCAC	95156994	True	NA	8	True	AATAAA	-21	NA	95157621	95179931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158192_95158235_95179503
transcript_45402.nnic	chr14	+	792	3	NIC	ENSG00000235706.9	novel	817	4	NA	NA	-1	0	intron_retention	FALSE	canonical	3	7	junction_1	17	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCATTGCTTTTTTGGGC	95157026	True	NA	2	True	AATAAA	-15	NA	95157653	95179925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_95157859_95158875_95159036_95179498
transcript_4541.known	chr1	-	2340	9	FSM	ENSG00000131238.18	ENST00000530704.6	2340	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	537.675886919806	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTAGTTTCTTATCCTTG	-40082199	True	NA	-31	True	NA	NA	NA	40097252	40072725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089583_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_45410.known	chr14	+	1709	3	FSM	ENSG00000235706.9	ENST00000554631.2	1709	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTTGGGCTGTCACGT	95157017	True	NA	10	True	AATAAA	-23	NA	95157644	95179933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95159036_95179498_95179634_95179750
transcript_45411.known	chr14	-	3023	6	FSM	ENSG00000165959.12	ENST00000556454.1	3023	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	6.41872261435249	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCAGGGGCGGGGTTACT	NA	False	NA	-22	True	AATAAA	-14	NA	95210851	95191529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95191733_95193848_95194597_95196497_95196695_95202837_95204464_95209394_95209478_95210685
transcript_45412.known	chr14	+	1103	2	FSM	ENSG00000182512.5	ENST00000331334.5	1103	2	0	0	0	0	multi-exon	FALSE	canonical	3	1713	junction_1	0	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGTCGAGCCCTGGTCT	95516659	True	NA	14	True	ATTAAA	-14	NA	95535049	95544714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95535385_95543946
transcript_45414.nnic	chr14	-	338	3	NNC	ENSG00000247092.8	novel	3043	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	48.5	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTTCCTACCTGTGT	-95534631	False	NA	-32	True	ATTAAA	-16	NA	95534645	95532911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_-_95533062_95533692_95533749_95534513
transcript_45420.known	chr14	-	981	2	FSM	ENSG00000247092.8	ENST00000554169.2	1375	2	394	0	-10	0	multi-exon	FALSE	canonical	3	99	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTACAAGGATCAGTAACAAA	-95534231	False	NA	NA	False	NA	NA	NA	95534245	95532633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95533062_95533692
transcript_45422.known	chr14	-	428	2	FSM	ENSG00000247092.8	ENST00000553559.1	428	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	-95534858	False	NA	-34	True	ATTAAA	-14	NA	95534872	95532913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95533062_95534592
transcript_45423.known	chr14	-	221	2	FSM	ENSG00000247092.8	ENST00000555866.5	221	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACCTGTTGTTCCTACCTGT	-95532640	True	NA	-34	True	ATTAAA	-14	NA	95534586	95532913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95533062_95534513
transcript_45424.known	chr14	+	1142	4	FSM	ENSG00000213231.13	ENST00000340722.8	1142	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	3.85861230093008	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	95685762	True	NA	18	True	ATTAAA	-18	NA	95686425	95692628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95686630_95690735_95690907_95691267_95691337_95691930
transcript_4543.known	chr1	-	2481	8	FSM	ENSG00000131238.18	ENST00000641236.1	2481	8	0	0	0	0	multi-exon	FALSE	canonical	3	1526	junction_2	73.1590383886993	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-40082197	True	NA	-43	True	NA	NA	NA	40097250	40072737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092508_40097114
transcript_45430.known	chr14	+	1724	3	FSM	ENSG00000213231.13	ENST00000464815.5	1724	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	4.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTTGTGCTGAATTGGA	95685774	True	NA	18	True	ATTAAA	-18	NA	95686437	95692628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_95686630_95690735_95690907_95691267
transcript_45432.known	chr14	-	1391	4	FSM	ENSG00000100721.11	ENST00000554012.5	1391	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	5.90668171555645	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTTCCTTTGGA	-95714062	True	NA	89	True	AATAAA	-14	NA	95714196	95709966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_95710882_95711753_95711803_95712219_95712397_95713946
transcript_45435.known	chr14	+	774	3	FSM	ENSG00000227051.7	ENST00000556728.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTCCTCTGTGTCTGGTTC	96038596	True	NA	11	True	AAGAAA	-6	NA	96039371	96093887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96039528_96086510_96086763_96093521
transcript_45438.known	chr14	+	7627	2	FSM	ENSG00000227051.7	ENST00000555004.3	7627	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCTGATGCTTTTCC	96038586	True	NA	95	True	TTTAAA	-21	NA	96039361	96093971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96039528_96086510
transcript_45439.nnic	chr14	+	505	3	NNC	ENSG00000168398.7	novel	6845	3	NA	NA	12	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATAGCTCTAGCATTTGTT	96204831	True	NA	NA	False	AATAAA	-15	NA	96204850	96244161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_96204960_96237068_96237182_96243878
transcript_45442.known	chr14	+	2140	3	FSM	ENSG00000100744.15	ENST00000438650.5	2140	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	224.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAGCTTGTTTCCATTTTT	96359765	True	NA	7	True	GATAAA	-12	NA	96363451	96387286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96363569_96382246_96382506_96385522
transcript_45446.known	chr14	+	760	4	FSM	ENSG00000100744.15	ENST00000554182.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	53.8227543785051	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTCTTCATATAATATCT	96359839	True	NA	NA	False	NA	NA	NA	96363525	96385912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96363569_96379687_96379756_96382246_96382506_96385522
transcript_45448.known	chr14	+	3283	18	FSM	ENSG00000140057.9	ENST00000267584.9	3283	18	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_13	5.81550248939438	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCGTGTCTGGCTTCTTTC	96391609	True	NA	12	True	AATAAA	-19	NA	96392127	96489427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96392260_96398074_96398264_96404756_96404866_96408846_96408942_96420821_96420933_96437834_96437916_96442729_96442819_96446516_96446608_96449801_96449880_96451420_96451571_96456346_96456476_96458082_96458213_96471477_96471607_96472686_96472756_96478464_96478663_96482998_96483220_96486897_96487057_96488304
transcript_4545.known	chr1	-	2195	8	FSM	ENSG00000131238.18	ENST00000439754.6	2195	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	549.343950098847	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGAGTAGTTTCTTATCC	-40082199	True	NA	-34	True	NA	NA	NA	40097252	40072728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40078559_40078659_40080396_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097114
transcript_45457.nnic	chr14	+	820	3	NNC	ENSG00000140057.9	novel	601	3	NA	NA	-51	1112	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGGCTGTGTTGGACCGC	96391558	True	NA	7	True	ATTAAA	-21	NA	96392076	96400404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_96392260_96398074_96398611_96400303
transcript_45459.known	chr14	+	1345	2	FSM	ENSG00000140057.9	ENST00000555570.1	1345	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGAATGCATCCCCTCCAGAC	96391614	True	NA	NA	False	AATAAA	-16	NA	96392132	96399292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96392260_96398074
transcript_45472.known	chr14	-	1512	1	FSM	ENSG00000260806.1	ENST00000569214.1	1512	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	82	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGGTAGTTC	-96502089	True	NA	NA	False	AAAAAG	-39	NA	96502321	96500809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_96500800_96502300
transcript_45473.known	chr14	+	3264	9	FSM	ENSG00000090060.19	ENST00000557320.5	3264	9	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	96.8836286479816	1246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCCCTGTATTTTTTA	96471626	True	NA	NA	False	AATAAA	-9	NA	96502400	96534885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510
transcript_45474.known	chr14	+	4515	22	FSM	ENSG00000090060.19	ENST00000216277.13	4515	22	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_12	501.608379103055	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTGCCTGATTTCTTTTG	96471607	True	NA	18	True	AATAAA	-21	NA	96502381	96567116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_45475.known	chr14	+	1421	7	FSM	ENSG00000090060.19	ENST00000557471.5	1421	7	0	0	0	0	multi-exon	FALSE	canonical	3	2066	junction_1	101.167764958344	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTAATGTTGTTTTTTT	96471666	True	NA	NA	False	ATTAAA	-8	NA	96502440	96532248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474
transcript_45476.known	chr14	+	2173	12	FSM	ENSG00000090060.19	ENST00000618976.2	2173	12	0	0	0	0	multi-exon	TRUE	canonical	3	1208	junction_9	433.255617103883	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGATGTCTCTGTGTTTT	96471601	True	NA	0	True	ATTAAA	-18	NA	96502375	96537901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96527429_96527540_96527952_96528007_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975
transcript_45477.known	chr14	+	848	6	FSM	ENSG00000090060.19	ENST00000554130.5	848	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	901.496400436519	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACAGAAGAGTATGTAGTA	96471637	True	NA	NA	False	AATAAA	-20	NA	96502411	96531728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96527429_96527540_96527952_96528007_96531474
transcript_45478.known	chr14	+	2267	20	FSM	ENSG00000090060.19	ENST00000553689.5	2267	20	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	536.761345834693	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACAACCTCAGGGGTCC	96471623	True	NA	8	True	AATAAA	-18	NA	96502397	96565048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96502601_96520054_96520229_96521005_96521073_96525309_96525392_96531474_96531587_96532330_96532421_96532510_96532650_96534490_96534564_96535878_96536000_96536975_96537061_96542242_96542297_96542773_96542894_96544148_96544259_96547796_96547919_96552479_96552623_96555846_96555948_96556174_96556414_96560648_96560712_96562818_96562894_96564954
transcript_4548.known	chr1	-	1957	6	FSM	ENSG00000131238.18	ENST00000449045.7	1957	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	627.032885899934	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTAAAATAAAGAGTAGT	-40082207	True	NA	-43	True	NA	NA	NA	40097260	40072737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40074184_40076841_40076914_40078559_40078659_40080396_40080488_40089409_40089513_40097114
transcript_45481.known	chr14	+	1354	3	FSM	ENSG00000258702.4	ENST00000655609.1	1354	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCAGTGCAGCGGTGT	96592716	True	NA	NA	False	NA	NA	NA	96592767	96595763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96592816_96593489_96593696_96594663
transcript_45483.known	chr14	+	1072	4	FSM	ENSG00000258702.4	ENST00000663585.1	1072	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCCAGTGCAGCGGTGT	96592710	True	NA	NA	False	NA	NA	NA	96592761	96595763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96592816_96593120_96593250_96593489_96593700_96595084
transcript_45484.known	chr14	+	430	4	FSM	ENSG00000258979.3	ENST00000556669.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATAATTGGCATTGATTG	96741158	False	NA	NA	False	AATAAA	-17	NA	96741190	96790613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96741212_96744160_96744270_96753268_96753327_96790371
transcript_4549.known	chr1	-	588	6	FSM	ENSG00000131238.18	ENST00000372779.9	588	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	636.977550624824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGTATCGCAACCACAGC	-40082192	True	NA	NA	False	CATAAA	-6	NA	40097245	40080446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40080488_40089409_40089513_40091328_40091400_40092044_40092173_40092397_40092508_40097110
transcript_45491.known	chr14	+	1682	13	FSM	ENSG00000100749.9	ENST00000680683.1	1682	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	308.836796166951	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGTATGTTGTGGCTG	96789146	True	NA	8	True	AATAAA	-23	NA	96797379	96881605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881155
transcript_45492.known	chr14	+	1634	13	FSM	ENSG00000100749.9	ENST00000680849.1	1634	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	303.93213560852	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACAGTATGTTGTGGCTGT	96789171	True	NA	9	True	AATAAA	-24	NA	96797404	96881606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837815_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96876029_96876121_96881176
transcript_45493.known	chr14	+	1435	13	FSM	ENSG00000100749.9	ENST00000680538.1	1435	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_10	308.787098535904	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCAGGTTATACT	96789080	True	NA	30	True	ATTAAA	-19	NA	96797313	96881403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860646_96860736_96876029_96876121_96881176
transcript_45494.known	chr14	+	1511	11	FSM	ENSG00000100749.9	ENST00000680851.1	1511	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	328.944128994576	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGGCTGTAAGGTTTG	96833428	True	NA	17	True	AATAAA	-32	NA	96833466	96881614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96860556_96860736_96881176
transcript_45495.known	chr14	+	1202	10	FSM	ENSG00000100749.9	ENST00000679736.1	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	343.595297399516	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTAGCAAGTTACTA	96789151	True	NA	NA	False	AATAAA	-18	NA	96797384	96860922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556
transcript_45496.known	chr14	+	1520	12	FSM	ENSG00000100749.9	ENST00000680922.1	1520	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	484.960371559853	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TGAAAAAAAAAAGAAAAACA	96789153	True	NA	NA	False	AAGAAA	-23	NA	96797386	96945391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856527_96856587_96860556_96860736_96943516_96943681_96945048
transcript_45497.known	chr14	+	1280	12	FSM	ENSG00000100749.9	ENST00000681474.1	1280	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	316.883689588582	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCTTCAGGTTATACT	96789146	True	NA	30	True	ATTAAA	-19	NA	96797379	96881403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_96797448_96833466_96833632_96837761_96837818_96846094_96846165_96847256_96847345_96852830_96852940_96853073_96853167_96855223_96855357_96856129_96856251_96856527_96856587_96876029_96876121_96881176
transcript_45498.nnic	chr14	-	1324	2	Antisense	novelGene_ENSG00000285584.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTACGGGTTCATGGTTT	NA	False	NA	NA	False	AATAAA	-20	NA	97219307	97216902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr14_-_97218056_97219136
transcript_4550.known	chr1	+	6232	8	FSM	ENSG00000117000.9	ENST00000372771.5	6232	8	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_6	21.2362800847214	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTGTTTACTCATAATG	40156794	True	NA	7	True	AATAAA	-18	NA	40161386	40240921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40161637_40189054_40189210_40190771_40190854_40195631_40195765_40202411_40202615_40222573_40222711_40231516_40231659_40235791
transcript_45504.known	chr14	+	1115	3	FSM	ENSG00000246084.6	ENST00000499910.3	1157	3	42	0	12	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATAGTGGATTTCCTA	97458833	True	NA	NA	False	AATAAA	-16	NA	97458869	97464159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_97458928_97461803_97462333_97463631
transcript_45507.known	chr14	-	423	1	FSM	ENSG00000232573.1	ENST00000417615.1	423	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	240	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAGGAACAGATTTTGCA	NA	False	NA	-80	True	AAGAAA	-31	NA	98973301	98972878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_98972900_98973300
transcript_45509.known	chr14	-	2856	13	FSM	ENSG00000183576.13	ENST00000331768.10	2856	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_8	29.2759856082307	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTGTCTATTCCTTTT	-99475858	True	NA	-6	True	ATTAAA	-17	NA	99480859	99397747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_99399126_99400098_99400260_99404224_99404311_99405204_99405372_99406515_99406591_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_45518.known	chr14	-	1330	9	FSM	ENSG00000183576.13	ENST00000329331.7	1330	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	109.399425844014	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGATCTTTTTTCTTTGT	-99475787	True	NA	1	True	AATAAA	-18	NA	99480788	99409803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_99410216_99412950_99413066_99413875_99413935_99458278_99458536_99459112_99459186_99461191_99461341_99463485_99463579_99465702_99465814_99480727
transcript_45530.known	chr14	+	4460	22	FSM	ENSG00000066629.18	ENST00000262233.11	4460	22	0	0	0	0	multi-exon	TRUE	canonical	3	60	junction_11	8.93310995760934	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTTCATTTCATTTTAAT	99792073	True	NA	NA	False	AATGAA	-25	NA	99793412	99942060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_99793544_99850852_99851036_99865513_99865647_99878484_99878620_99891198_99891228_99894628_99894759_99897144_99897295_99898232_99898303_99900928_99901040_99907637_99907734_99909344_99909480_99910241_99910342_99911421_99911577_99914178_99914305_99914565_99914698_99917781_99917850_99920788_99920878_99936028_99936127_99936246_99936335_99937816_99937913_99939196_99939328_99939986
transcript_45534.known	chr14	-	3834	3	FSM	ENSG00000168350.8	ENST00000305631.7	3834	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGACCTGGTGTTCCGTGT	-100159589	True	NA	NA	False	TATAAA	-16	NA	100159645	100143956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100146908_100148967_100149711_100159505
transcript_45535.known	chr14	+	6534	5	FSM	ENSG00000100811.14	ENST00000262238.10	6534	5	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	19.1702895126808	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGCCTGTGGTTCTTGT	100236209	True	NA	19	True	AATAAA	-19	NA	100239143	100282788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100239924_100262303_100262467_100274697_100274759_100276489_100276649_100277417
transcript_45537.known	chr14	-	331	2	FSM	ENSG00000258982.1	ENST00000554537.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTGTAACACTCACTGCA	-100238286	True	NA	NA	False	NA	NA	NA	100238555	100207406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100207653_100238470
transcript_45538.known	chr14	+	2742	1	FSM	ENSG00000100811.14	ENST00000623799.1	2742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATATGGCAGAACAAGATC	100275717	False	NA	5	True	AATAAA	-19	NA	100275728	100278470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100275700_100278500
transcript_45539.known	chr14	+	1923	7	FSM	ENSG00000176473.14	ENST00000402312.8	1923	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	32.5802428201851	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374972	True	NA	36	True	AATAAA	-36	NA	100376484	100530303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376496_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_4554.nnic	chr1	+	631	3	NNC	ENSG00000117000.9	novel	6232	8	NA	NA	-11	-50392	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	53	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCTTATTATATTCTTACC	40156783	True	NA	NA	False	AATAAA	-34	NA	40161375	40190529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_40161637_40189054_40189210_40190314
transcript_45540.known	chr14	+	1952	7	FSM	ENSG00000176473.14	ENST00000554998.5	1952	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	26.9840487860678	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTTGCTGTTTGTTAAG	100374920	True	NA	4	True	AATAAA	-4	NA	100376432	100530271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376505_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_45541.known	chr14	+	2123	7	FSM	ENSG00000176473.14	ENST00000335290.10	2123	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	37.9282949202249	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374981	True	NA	36	True	AATAAA	-36	NA	100376493	100530303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376705_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_45543.nnic	chr14	+	2222	7	NNC	ENSG00000176473.14	novel	2123	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	41.5291062589441	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTGCATTAGCAGCTT	100374987	True	NA	36	True	AATAAA	-36	NA	100376499	100530303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_100376810_100380909_100381747_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_45544.known	chr14	+	705	6	FSM	ENSG00000176473.14	ENST00000555775.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	42.9138672226123	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGGTGACTTGCTGGTGAC	100376404	False	NA	NA	False	NA	NA	NA	100376417	100529855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100376496_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_45547.known	chr14	+	1214	6	FSM	ENSG00000176473.14	ENST00000542471.2	1214	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.015649511878	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATTTCAGCAACAAGTGT	100381972	False	NA	23	True	AATAAA	-23	NA	100381999	100530290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100382152_100468020_100468169_100483993_100484125_100525869_100526041_100529067_100529209_100529819
transcript_4555.nic	chr1	+	1199	3	ISM	ENSG00000117000.9	ENST00000372771.5	6232	8	-11	49367	-11	-49367	5prime_fragment	FALSE	canonical	3	106	junction_1	10	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATAATAAATAATAGACCG	40156783	True	NA	NA	False	AAAAAG	-1	NA	40161375	40191554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_40161637_40189054_40189210_40190771
transcript_45555.known	chr14	-	2639	11	FSM	ENSG00000140105.18	ENST00000392882.7	2639	11	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_10	206.528061047403	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGTCATTGTGCTCTGT	-100361632	False	NA	-8	True	AATAAA	-16	NA	100375347	100333789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100375282
transcript_45557.known	chr14	-	3092	11	FSM	ENSG00000140105.18	ENST00000355338.6	3092	11	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_10	132.76957482797	374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGAGTAAATAAACTTCCTT	NA	False	NA	-36	True	NA	NA	NA	100376805	100333817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100369086_100369259_100376259
transcript_4556.nic	chr1	+	1023	2	ISM	ENSG00000117000.9	ENST00000372771.5	6232	8	-11	51105	-11	-51105	5prime_fragment	FALSE	canonical	3	106	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGTGATTTAGCTGTTAT	40156783	True	NA	NA	False	NA	NA	NA	40161375	40189816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_40161637_40189054
transcript_45569.known	chr14	-	2466	10	FSM	ENSG00000140105.18	ENST00000358655.8	2466	10	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_9	208.457829468376	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTCCTGCTCTTGTC	-100362620	True	NA	-20	True	AATAAA	-4	NA	100376335	100333801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100335037_100337061_100337203_100342397_100342572_100343274_100343388_100346745_100346847_100353686_100353870_100354446_100354567_100360553_100360663_100361707_100361922_100376259
transcript_4557.known	chr1	-	1541	1	FSM	ENSG00000259943.1	ENST00000567508.1	1541	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	179	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTAGTGTATGTTTTA	-40257163	True	NA	-4	True	AATAAA	-17	NA	40257967	40256426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40256400_40258000
transcript_45578.known	chr14	-	573	4	FSM	ENSG00000140105.18	ENST00000555063.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	311.898844000565	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTGCTTATAAACCAT	-100362628	True	NA	NA	False	NA	NA	NA	100376343	100354400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_100354567_100360553_100360663_100361707_100361922_100376259
transcript_45579.known	chr14	+	1426	6	FSM	ENSG00000214548.18	ENST00000521404.5	1426	6	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	478.10668265566	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTCTCAATAAATGTGTT	100826003	True	NA	NA	False	NA	NA	NA	100826125	100860989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100836166_100836301_100845457_100845534_100860690
transcript_4558.known	chr1	+	3263	11	FSM	ENSG00000084073.10	ENST00000674703.1	3263	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	258.739424904671	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTATGTACTTTGTCTT	40258047	False	NA	13	True	ATTAAA	-13	NA	40258090	40294173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40258395_40260838_40260986_40262833_40262984_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_45580.known	chr14	+	1582	7	FSM	ENSG00000214548.18	ENST00000451743.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_4	544.384591381253	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGTGCTACTAATATAAG	100826003	True	NA	NA	False	AATAAA	-29	NA	100826125	100861031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_45581.known	chr14	+	1608	7	FSM	ENSG00000214548.18	ENST00000429159.6	1608	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	550.145056629007	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTGATGGATGTGCTACT	100825985	True	NA	NA	False	AATAAA	-21	NA	100826107	100861023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100832511_100832642_100836166_100836301_100845457_100845534_100860690
transcript_45582.known	chr14	+	1643	7	FSM	ENSG00000214548.18	ENST00000648456.1	1643	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	580.378731710787	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	NA	False	NA	NA	False	AATAAA	-24	NA	100826097	100861026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829788_100831420_100831535_100836166_100836301_100845457_100845534_100860690
transcript_45583.known	chr14	+	1712	8	FSM	ENSG00000214548.18	ENST00000554639.5	1712	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	590.65936866854	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100826009	True	NA	NA	False	AATAAA	-24	NA	100826131	100861026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831420_100831535_100835738_100835880_100836166_100836301_100845457_100845534_100860690
transcript_45584.known	chr14	+	1694	8	FSM	ENSG00000214548.18	ENST00000412736.7	1694	8	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	606.162973976808	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGATGTGCTACTAAT	100825995	True	NA	NA	False	AATAAA	-24	NA	100826117	100861026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_100826218_100828707_100828817_100829033_100829750_100831015_100831095_100835735_100835880_100836166_100836301_100845457_100845534_100860690
transcript_45594.known	chr14	+	2102	1	FSM	ENSG00000197406.7	ENST00000510508.4	2102	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTTGCCTTTGGTCCCT	NA	False	NA	10	True	AATAAA	-20	NA	101561350	101563452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101561400_101563500
transcript_45595.known	chr14	+	438	1	FSM	ENSG00000241494.1	ENST00000472981.1	438	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1513	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAATCTTATATACGAGCT	NA	False	NA	NA	False	AATACA	-33	NA	101677942	101678380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101677900_101678400
transcript_45596.known	chr14	+	639	4	FSM	ENSG00000258512.1	ENST00000556973.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAATAGAAACCAGCAGA	NA	False	NA	NA	False	AATAAA	-20	NA	101730436	101732522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101730488_101731356_101731469_101731787_101731977_101732235
transcript_45599.known	chr14	+	1526	12	FSM	ENSG00000078304.19	ENST00000445439.7	1526	12	0	0	0	0	multi-exon	TRUE	canonical	3	346	junction_1	43.9573422067838	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTCCTTTTGTACAAGTAC	101807785	True	NA	13	True	AATAAA	-22	NA	101809894	101912625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101810037_101856685_101856886_101882160_101882272_101883256_101883350_101883431_101883563_101890236_101890297_101892999_101893109_101894506_101894561_101901718_101901890_101906401_101906530_101909588_101909691_101912400
transcript_456.known	SIRV5	+	552	2	FSM	SIRV5A	SIRV506	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	13272	junction_1	0	4858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1150_1987
transcript_45600.known	chr14	+	735	2	FSM	ENSG00000078304.19	ENST00000556946.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCTTTAAATCCTAAG	101807725	True	NA	NA	False	ATTAAA	-19	NA	101809834	101836701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101810037_101836168
transcript_45601.known	chr14	+	2013	3	FSM	ENSG00000078304.19	ENST00000556260.6	2013	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGCTTCAGCTTAGTTT	101761831	False	NA	23	True	ATTAAA	-29	NA	101761869	101767049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101761921_101762904_101762971_101765153
transcript_45603.known	chr14	-	448	2	FSM	ENSG00000259088.1	ENST00000554859.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGGGGCTGAAGCTAGA	-101810249	True	NA	NA	False	NA	NA	NA	101810321	101796554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_101796898_101810216
transcript_45604.known	chr14	+	1079	1	FSM	ENSG00000271780.1	ENST00000607414.1	1079	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGTGTTGAATAAGTGAT	101948116	True	NA	89	True	ATTAAA	-36	NA	101948346	101949425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_101948300_101949400
transcript_45608.nic	chr14	+	1501	7	ISM	ENSG00000197102.14	ENST00000681668.1	5261	25	-58	21211	-58	-6133	5prime_fragment	FALSE	canonical	3	81	junction_4	15.7550697307953	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAAAATCTGAAGATG	101945639	True	NA	NA	False	AAGAAA	-3	NA	101964514	101983472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_101964948_101975711_101975800_101979318_101979493_101979718_101979975_101980363_101980551_101983018_101983291_101983381
transcript_4562.known	chr1	+	2975	10	FSM	ENSG00000084073.10	ENST00000372759.4	2975	10	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_5	27.7733329777209	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTACTTTGTCTTTAGTTTG	40253183	True	NA	20	True	ATTAAA	-20	NA	40258235	40294180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_45647.known	chr14	+	491	3	FSM	ENSG00000140153.18	ENST00000557485.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	50.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAACATGTACTTATATAA	102139329	False	NA	NA	False	NA	NA	NA	102139502	102208683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102139730_102194937_102195121_102208602
transcript_45652.known	chr14	+	785	3	FSM	ENSG00000140153.18	ENST00000556094.1	785	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGACGCTGCAATCACAG	102137004	True	NA	NA	False	NA	NA	NA	102139914	102223358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102139988_102194937_102195121_102222829
transcript_45654.known	chr14	+	2198	3	FSM	ENSG00000140153.18	ENST00000299135.6	2198	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCAGTTTGTAGCACTTTG	102137000	True	NA	16	True	AATAAA	-16	NA	102139910	102210525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102193462_102193476_102208602
transcript_45655.known	chr14	+	2382	3	FSM	ENSG00000140153.18	ENST00000556807.1	2382	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	20	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACCGCTTGTTTATCTTCTG	102136982	True	NA	6	True	ATTAAA	-14	NA	102139892	102223671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102208602_102209863_102222829
transcript_45658.known	chr14	-	3228	11	FSM	ENSG00000080824.19	ENST00000216281.13	3228	11	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_10	505.282732734852	18399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTGTCTCAAAGTTC	-101959874	True	NA	-5	True	AATACA	-19	NA	102087044	102080741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102086985
transcript_45659.known	chr14	-	3510	12	FSM	ENSG00000080824.19	ENST00000334701.11	3510	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_11	1445.54983676749	3857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTGTGTGACAGTGTCTT	-102139181	True	NA	-8	True	AATACA	-14	NA	102139686	102081048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102081822_102082110_102082445_102083033_102083303_102083545_102083694_102083792_102083984_102084398_102084565_102084680_102084999_102085297_102085432_102085757_102086125_102086216_102086379_102101874_102102086_102139249
transcript_4566.known	chr1	+	3357	11	FSM	ENSG00000084073.10	ENST00000675937.1	3357	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	259.037912283125	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTATGTACTTTGTCTTT	NA	False	NA	14	True	ATTAAA	-14	NA	40258040	40294174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40258395_40260838_40260986_40267785_40267873_40268418_40268536_40269974_40270128_40271893_40272036_40280119_40280313_40281342_40281528_40285924_40286030_40290853_40290998_40292444
transcript_45660.known	chr14	-	581	5	FSM	ENSG00000080824.19	ENST00000553585.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1290.03536773222	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAGAAGAGAA	-101959874	True	NA	-133	True	AAGAAA	-18	NA	102087044	102084932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102084999_102085297_102085432_102085964_102086125_102086216_102086379_102086985
transcript_45661.known	chr14	-	552	2	FSM	ENSG00000080824.19	ENST00000556554.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	2947	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTGTTGGTTTTTATTCTG	-101959874	True	NA	-14	True	NA	NA	NA	102087044	102085885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102086379_102086985
transcript_45662.known	chr14	+	2616	4	FSM	ENSG00000140153.18	ENST00000335263.9	2616	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	26.5497436689865	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTTGTTTATCTTCTGTT	102136933	True	NA	8	True	ATTAAA	-16	NA	102139843	102223673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102194937_102195121_102208602_102209863_102222829
transcript_45663.known	chr14	+	2384	3	FSM	ENSG00000140153.18	ENST00000342702.8	2384	3	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	11	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGTAGCACTTTGAT	102136986	True	NA	18	True	AATAAA	-18	NA	102139896	102210527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102140173_102194937_102195121_102208602
transcript_45664.known	chr14	+	2971	8	FSM	ENSG00000022976.16	ENST00000558850.5	2971	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	18.0543397462624	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTGCTGTCTACATTTT	NA	False	NA	4	True	TATAAA	-15	NA	102317376	102342364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102317667_102325984_102326888_102331621_102331847_102334553_102334647_102335688_102335839_102338815_102338954_102339093_102339224_102341322
transcript_45670.known	chr14	-	845	5	FSM	ENSG00000100865.15	ENST00000536961.6	845	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	196.387849675075	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCAGGCCTGGATCAGACC	-102358936	False	NA	NA	False	NA	NA	NA	102362714	102348484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362573
transcript_45674.known	chr14	-	4270	6	FSM	ENSG00000100865.15	ENST00000559514.5	4270	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	175.10065676633	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGACAGTGTGCTTTTTTTT	-102359138	False	NA	NA	False	ATTAAA	-20	NA	102362916	102341101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102344390_102348278_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_45675.known	chr14	-	953	5	FSM	ENSG00000100865.15	ENST00000216756.11	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	23.8170107276291	2935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGAGTGATCTAGTTTC	-102359112	True	NA	-2	True	AGTAAA	-23	NA	102362890	102348281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102348760_102349918_102350049_102355767_102355898_102359418_102359588_102362844
transcript_45677.known	chr14	+	7640	11	FSM	ENSG00000131323.16	ENST00000560371.5	7640	11	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	9.61301201497221	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTGATCACACCGTCTC	102777419	True	NA	22	True	AATAAA	-19	NA	102777475	102911500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_102777676_102870184_102870447_102871916_102871969_102875623_102875729_102876357_102876526_102886188_102886270_102889559_102889635_102891324_102891418_102897260_102897402_102903254_102903430_102905212
transcript_4568.known	chr1	-	2852	32	FSM	ENSG00000049089.15	ENST00000372748.8	2852	32	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_31	5.88795839916535	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGAGTTGTTGGGCTTC	-40317218	True	NA	33	True	NA	NA	NA	40317286	40300488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40301382_40301811_40301890_40302620_40302810_40303130_40303186_40303529_40303677_40303806_40303840_40303927_40303973_40304063_40304100_40304319_40304392_40304475_40304530_40304793_40304848_40305714_40305769_40306142_40306188_40307445_40307500_40307702_40307757_40308191_40308246_40309937_40309992_40310110_40310165_40310263_40310318_40310713_40310768_40311092_40311147_40311229_40311287_40311499_40311548_40311661_40311716_40312058_40312113_40312455_40312480_40312573_40312610_40312730_40312785_40314204_40314268_40314351_40314388_40315589_40315665_40317122
transcript_45680.known	chr14	-	6844	37	FSM	ENSG00000198752.11	ENST00000361246.7	6844	37	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_15	7.73654746425475	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTGGTCCGTTTGGATG	-103051768	True	NA	-3	True	AATAAA	-25	NA	103057549	102932379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_102933844_102938103_102938175_102938305_102938412_102939609_102939728_102939829_102939948_102940045_102940131_102940226_102940325_102943890_102944488_102945661_102945725_102946467_102946685_102947720_102947803_102949764_102949905_102950465_102950603_102952497_102952604_102954197_102954276_102954601_102954689_102959630_102959711_102963060_102963156_102964501_102964651_102966281_102966388_102967045_102967171_102968252_102968359_102968471_102968717_102970150_102970262_102971918_102972162_102974015_102974150_102975683_102975804_102975882_102976050_102978125_102978206_102980772_102981022_102983555_102983757_102986486_102986581_102999564_102999714_103003927_103004024_103008471_103008556_103012096_103012189_103056998
transcript_45687.known	chr14	+	5710	12	FSM	ENSG00000100664.11	ENST00000216554.8	5710	12	0	0	0	0	multi-exon	FALSE	canonical	3	1325	junction_1	235.608689452351	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGGAGTCACTTGTGTTCAA	103312236	True	NA	10	True	AATAAA	-22	NA	103334236	103345025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326_103338473_103338734_103338894_103339171_103339334_103339638_103339804_103340426_103340562_103340962
transcript_45695.nic	chr14	+	1126	7	ISM	ENSG00000100664.11	ENST00000216554.8	5710	12	-224	6677	-176	0	5prime_fragment	FALSE	canonical	3	1325	junction_1	285.194913855224	586	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAGAAAAAGAAAAGA	103333999	False	NA	NA	False	NA	NA	NA	103334012	103338348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_+_103334261_103334388_103334598_103335652_103335933_103336035_103336118_103336676_103336850_103337115_103337228_103338326
transcript_45707.known	chr14	+	580	4	FSM	ENSG00000100664.11	ENST00000560338.5	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	956.480121185078	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGAGAATCCTGAAACAGA	103312191	True	NA	NA	False	ATTAAA	-22	NA	103334191	103336825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103334261_103335652_103335933_103336035_103336118_103336676
transcript_45708.known	chr14	+	719	5	FSM	ENSG00000100664.11	ENST00000558316.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	864.71801762193	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTTCCATGATGAAC	103334357	False	NA	NA	False	CATAAA	-32	NA	103334386	103337227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103334598_103335791_103335933_103336035_103336118_103336676_103336850_103337115
transcript_45709.known	chr14	+	552	2	FSM	ENSG00000100664.11	ENST00000558800.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	3	2258	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGATGTTTGGCTCTGAA	103340330	False	NA	9	True	AATAAA	-20	NA	103340403	103341356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103340562_103340962
transcript_45710.known	chr14	-	1420	8	FSM	ENSG00000166165.14	ENST00000348956.7	1420	8	0	0	0	0	multi-exon	FALSE	canonical	3	1706	junction_7	276.78968660744	1559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	-103455284	True	NA	-9	True	AATAAA	-19	NA	103522830	103519666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022_103522178_103522300_103522506_103522765
transcript_45711.nic	chr14	-	1239	6	ISM	ENSG00000166165.14	ENST00000348956.7	1420	8	564	0	36	0	3prime_fragment	FALSE	canonical	3	2115	junction_5	187.524505065338	1645	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCTGAGTGGTGCCTCT	-103522186	False	NA	-9	True	AATAAA	-19	NA	103522266	103519666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr14_-_103520043_103520121_103520312_103520468_103520593_103521262_103521435_103521817_103521951_103522022
transcript_45714.known	chr14	-	270	3	FSM	ENSG00000166165.14	ENST00000555039.1	270	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	1295	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCCTGGGCTTCTCAGAG	-103521021	False	NA	NA	False	NA	NA	NA	103521101	103519991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103520043_103520121_103520312_103521072
transcript_45715.known	chr14	-	735	3	FSM	ENSG00000166165.14	ENST00000554282.5	735	3	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_2	1282.5	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGGCCTGCCTGCGTCTG	-103521363	False	NA	-21	True	AATAAA	-7	NA	103521443	103519678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103520043_103520121_103520312_103521262
transcript_45716.known	chr14	-	4063	1	FSM	ENSG00000260285.1	ENST00000568177.1	4063	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATACTTTGTCTCTGTGTCT	-103528992	True	NA	-3	True	NA	NA	NA	103529072	103525009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103525000_103529100
transcript_45717.nnic	chr14	+	1049	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	-21	-1989	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	64.6649484307809	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTCCCCTGGGTGTTGA	103525611	True	NA	17	True	NA	NA	NA	103529174	103535084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_45718.nnic	chr14	+	2010	4	NNC	ENSG00000166166.13	novel	3217	4	NA	NA	-21	-1028	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	64.6649484307809	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGAGTGATCCCTAGC	103525611	True	NA	16	True	AATAAA	-16	NA	103529174	103536045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_103529262_103530149_103530310_103532581_103532849_103534549
transcript_45719.known	chr14	+	2827	3	FSM	ENSG00000166166.13	ENST00000299202.4	2827	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	69.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	103525662	True	NA	3	True	ATTAAA	-19	NA	103529225	103537073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103529262_103532581_103532849_103534549
transcript_45720.known	chr14	+	3217	4	FSM	ENSG00000166166.13	ENST00000389749.9	3217	4	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	6.53197264742181	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCCTTCAAATGTCCTTT	103525632	True	NA	3	True	ATTAAA	-19	NA	103529195	103537073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103529262_103529949_103530310_103532581_103532849_103534549
transcript_45723.nnic	chr14	+	771	4	NIC	ENSG00000256053.9	novel	2506	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	225.596000752574	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	103558257	True	NA	22	True	AATAAA	-15	NA	103562962	103590527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103563125_103571622_103571821_103574106_103574171_103590180
transcript_45724.nnic	chr14	+	1140	4	NIC	ENSG00000256053.9	novel	1234	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	225.596000752574	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTCTGCTGACGGGAATG	103558257	True	NA	5	True	AATAAA	-17	NA	103562962	103590896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103563125_103571622_103571821_103574106_103574171_103590180
transcript_45725.nnic	chr14	+	707	3	NIC	ENSG00000256053.9	novel	782	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	264	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	103558257	True	NA	22	True	AATAAA	-15	NA	103562962	103590527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103563125_103571622_103571821_103590180
transcript_45726.known	chr14	+	2505	18	FSM	ENSG00000256500.6	ENST00000472726.3	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	125.19916313549	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTGTTCACTTTGGTAACA	103558256	True	NA	42	True	AATACA	-25	NA	103562961	103685924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103571622_103571821_103574106_103574171_103587273_103587365_103654563_103654826_103657545_103657777_103662115_103662195_103662701_103662928_103669510_103669599_103670181_103670284_103673013_103673188_103673331_103673432_103675551_103675602_103675688_103675757_103677414_103677524_103679383_103679546_103684985_103685037_103685637
transcript_45732.known	chr14	+	575	3	FSM	ENSG00000256053.9	ENST00000440963.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	216.5	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAGCCCAAGCACT	103558259	True	NA	-1	True	NA	NA	NA	103562964	103590504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103587273_103587365_103590180
transcript_45735.known	chr14	+	782	4	FSM	ENSG00000256053.9	ENST00000458117.6	782	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	209.19103443716	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCCGTTTCCTGTGTTTCG	103558273	True	NA	22	True	AATAAA	-15	NA	103562978	103590527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103571622_103571821_103587273_103587365_103590180
transcript_45736.known	chr14	+	447	3	FSM	ENSG00000256053.9	ENST00000554625.5	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	50.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGCTAGTCCATGAAAAG	103558276	True	NA	NA	False	NA	NA	NA	103562981	103574212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563125_103571622_103571821_103574106
transcript_45737.known	chr14	+	906	5	FSM	ENSG00000256053.9	ENST00000477116.5	906	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	212.117155128952	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTTTCCTGTGTTTC	103558467	False	NA	21	True	AATAAA	-14	NA	103563172	103590526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103563380_103571622_103571821_103574106_103574171_103587273_103587365_103590180
transcript_45738.known	chr14	-	2563	9	FSM	ENSG00000126215.14	ENST00000352127.11	2563	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_8	72.1481765188837	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	NA	False	NA	-33	True	AATAAA	-16	NA	103715504	103697616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103715423
transcript_4574.known	chr1	+	2109	6	FSM	ENSG00000187801.15	ENST00000411995.6	2109	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	9.45727233402951	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCCCAACTCTTAATTTT	40449461	True	NA	14	True	ATTAAA	-20	NA	40450106	40463718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40450176_40450655_40451089_40454202_40454289_40456944_40457072_40457343_40457440_40462420
transcript_45744.known	chr14	-	2567	10	FSM	ENSG00000126215.14	ENST00000555055.6	2567	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	78.2163823577632	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCAGGACCTGCTTCTTG	-103711887	True	NA	-33	True	AATAAA	-16	NA	103715451	103697616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103699018_103699132_103699180_103699363_103699577_103703172_103703328_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_45745.known	chr14	-	2599	8	FSM	ENSG00000126215.14	ENST00000557439.5	2599	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	129.816353801382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTGGCTTTTAATAGAAGC	-103711919	True	NA	NA	False	AATAAA	-12	NA	103715483	103704395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103706043_103706206_103706376_103707002_103707216_103708521_103708660_103711032_103711246_103711465_103711568_103712874_103712932_103715423
transcript_45747.known	chr14	+	1521	8	FSM	ENSG00000100711.14	ENST00000216602.10	1521	8	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_5	252.243080041002	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGGCCTCGCCTTCCTGTG	103703763	True	NA	24	True	ATTAAA	-21	NA	103715729	103733668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103729792_103729847_103732619_103732763_103732982
transcript_4575.nic	chr1	+	2070	5	NIC	ENSG00000187801.15	novel	2109	6	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	5.1478150704935	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTTCCCAACTCTTAAT	40449411	True	NA	11	True	ATTAAA	-17	NA	40450056	40463715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_40450176_40450655_40451089_40456944_40457072_40457343_40457440_40462420
transcript_45750.known	chr14	+	1383	7	FSM	ENSG00000100711.14	ENST00000311141.7	1383	7	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_5	133.291243356627	1439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	103703843	True	NA	20	True	ATTAAA	-17	NA	103715809	103733664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_4576.known	chr1	+	1976	5	FSM	ENSG00000187801.15	ENST00000484445.5	1976	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9463256809814	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCCAAAAACGAACATTAAAA	40449461	True	NA	-24	True	NA	NA	NA	40450106	40463680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40450176_40450664_40451089_40456944_40457072_40457343_40457440_40462420
transcript_45762.known	chr14	+	566	5	FSM	ENSG00000100711.14	ENST00000554630.5	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_4	17.3691536926817	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGGGTTTGGTGCCATGC	103703864	True	NA	NA	False	NA	NA	NA	103715830	103729211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_103715980_103726791_103726843_103727745_103727915_103728907_103728984_103729090
transcript_45764.nic	chr14	+	1186	5	NIC	ENSG00000100711.14	novel	1383	7	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	3	35	junction_1	388.190996804408	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACAAGGCCTCGCCTTCC	103703820	True	NA	20	True	ATTAAA	-17	NA	103715786	103733664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_+_103715980_103728907_103728984_103729090_103729183_103732619_103732763_103732982
transcript_45781.known	chr14	-	472	5	FSM	ENSG00000156411.10	ENST00000557040.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2277.46716496638	1038	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTACCTGGTACTGCTTT	-103886849	True	NA	-13	True	AATAAA	-18	NA	103921494	103912515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103918004_103918125_103921469
transcript_45783.known	chr14	-	842	5	FSM	ENSG00000156411.10	ENST00000414262.6	842	5	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	2249.991486095	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTGCTACTTATCTTGT	-103886856	True	NA	-29	True	AATAAA	-15	NA	103921501	103912301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103920939_103921209_103921469
transcript_4579.nnic	chr1	-	606	3	NNC	ENSG00000238287.1	novel	605	2	NA	NA	-44	6226	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATCAACTGTAAATGAA	-40508562	True	NA	NA	False	NA	NA	NA	40508705	40486930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_40487358_40493399_40493462_40508588
transcript_458.known	SIRV5	+	546	2	FSM	SIRV5A	SIRV511	546	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTACGGCCAGTTTAGC	NA	False	NA	NA	False	AATGAA	-17	NA	1008	2398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_1144_1987
transcript_4580.known	chr1	-	605	2	FSM	ENSG00000238287.1	ENST00000450713.1	605	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCCCGGGTTCAAGCGAT	-40508518	True	NA	NA	False	NA	NA	NA	40508661	40493156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_40493689_40508588
transcript_45805.known	chr14	-	271	3	FSM	ENSG00000156411.10	ENST00000553449.1	271	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	2196	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGCTACCTGGTACTGCTT	-103886893	True	NA	-14	True	AATAAA	-17	NA	103921538	103912516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103921469
transcript_45809.known	chr14	-	615	4	FSM	ENSG00000156411.10	ENST00000286953.8	615	4	0	0	0	0	multi-exon	TRUE	canonical	3	4431	junction_1	102.973567266341	26141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGGCCTCTCTGAGCC	-103886884	True	NA	-15	True	AATAAA	-29	NA	103921529	103912287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103915065_103915190_103921469
transcript_4581.known	chr1	+	1892	4	FSM	ENSG00000164002.12	ENST00000358527.6	1892	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	12.3558353285671	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508281	True	NA	3	True	AATAAA	-17	NA	40508740	40516036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508878_40509450_40509626_40509732_40509791_40514514
transcript_45810.known	chr14	-	749	5	FSM	ENSG00000156411.10	ENST00000555030.5	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	2224.02139996449	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTACTTATCTTGTGG	-103886875	True	NA	-27	True	AATAAA	-17	NA	103921520	103912299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_103912695_103913960_103913985_103914478_103914634_103915065_103915190_103921469
transcript_45811.known	chr14	+	660	4	FSM	ENSG00000288459.1	ENST00000672686.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTGATTCTGAGTCTCT	104293667	False	NA	NA	False	AATAAA	-16	NA	104293677	104294921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104293725_104293846_104293953_104294154_104294339_104294598
transcript_45813.known	chr14	+	1689	5	FSM	ENSG00000203485.14	ENST00000398337.8	1689	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	16.4696690920006	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGGGTTGCCAGGTACTGT	104686447	True	NA	NA	False	AATAAA	-19	NA	104689620	104704809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104689740_104701356_104701757_104703104_104703221_104703294_104703455_104703915
transcript_4582.known	chr1	+	1878	4	FSM	ENSG00000164002.12	ENST00000432259.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	13.2748718344933	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508307	True	NA	3	True	AATAAA	-17	NA	40508766	40516036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508890_40509450_40509626_40509732_40509791_40514514
transcript_45825.known	chr14	+	550	3	FSM	ENSG00000184990.13	ENST00000347067.9	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	684	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTCTTGTCTGTCAGCAC	104741646	True	NA	24	True	AATAAA	-22	NA	104753158	104759659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104753320_104756603_104756761_104759427
transcript_45828.known	chr14	+	752	4	FSM	ENSG00000184990.13	ENST00000329967.11	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	1413	junction_3	41.8807831827438	18416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGGACTCTTGTCTGTC	104741634	True	NA	19	True	AATAAA	-17	NA	104753146	104759654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_104753320_104755629_104755825_104756603_104756761_104759427
transcript_45829.known	chr14	-	1595	14	FSM	ENSG00000142208.18	ENST00000554848.5	1595	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	232.988762204552	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCGGTGGACTGCGCTG	-104790247	False	3944	NA	False	NA	NA	NA	104794191	104770340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104770421_104770744_104770848_104772364_104772453_104772877_104773093_104773250_104773380_104773454_104773581_104773911_104773981_104774937_104775004_104775075_104775208_104775651_104775800_104776658_104776771_104780087_104780217_104792597_104792723_104794118
transcript_4583.known	chr1	+	1691	3	FSM	ENSG00000164002.12	ENST00000443729.6	1691	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	14	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508338	True	NA	3	True	AATAAA	-17	NA	40508797	40516036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508909_40509732_40509791_40514514
transcript_45830.known	chr14	-	305	1	FSM	ENSG00000279140.1	ENST00000625139.1	305	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTATGATGCTCCATTT	-104815569	False	NA	NA	False	AATAAA	-18	NA	104815753	104815448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_104815400_104815800
transcript_45833.known	chr14	-	1536	3	FSM	ENSG00000170779.11	ENST00000392590.3	1536	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	297.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAATGTGGTGTTAGTTA	-105014738	True	NA	80	True	ATTAAA	-21	NA	105021060	105009935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105010634_105011159_105011936_105020998
transcript_45837.known	chr14	-	2448	2	FSM	ENSG00000170779.11	ENST00000336219.4	2448	2	0	0	0	0	multi-exon	FALSE	canonical	3	596	junction_1	0	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTAGTAGTTGTAGTGC	-105014761	True	NA	33	True	NA	NA	NA	105021083	105009572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105011936_105020998
transcript_4584.known	chr1	+	1677	2	FSM	ENSG00000164002.12	ENST00000420209.2	1677	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508294	True	NA	3	True	AATAAA	-17	NA	40508753	40516036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508909_40514514
transcript_45842.nnic	chr14	+	481	3	NNC	ENSG00000257556.3	novel	1016	4	NA	NA	41	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCAGCATTCTGTGGTG	105094000	False	NA	18	True	AATAAA	-17	NA	105094013	105095701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr14_+_105094217_105095326_105095443_105095539
transcript_45845.nic	chr14	-	763	5	NIC	ENSG00000183828.15	novel	854	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	79.0929042329336	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-105180190	True	NA	-6	True	AATAAA	-17	NA	105181257	105172938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr14_-_105173262_105176533_105176772_105176962_105176992_105177691_105177736_105181128
transcript_45848.known	chr14	-	854	5	FSM	ENSG00000183828.15	ENST00000392568.7	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_1	5.30919014539883	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGCCTGCTGGTTCTG	-105180245	True	NA	-6	True	AATAAA	-17	NA	105181312	105172938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105173262_105176533_105176772_105176962_105177028_105177691_105177736_105181128
transcript_45849.known	chr14	-	541	2	FSM	ENSG00000183828.15	ENST00000550912.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTGCTGGTTCTGA	-105172630	False	NA	-5	True	AATAAA	-18	NA	105173697	105172937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105173262_105173480
transcript_4585.known	chr1	+	1606	2	FSM	ENSG00000164002.12	ENST00000419161.2	1606	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508346	True	NA	3	True	AATAAA	-17	NA	40508805	40516036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508890_40514514
transcript_45851.nnic	chr14	+	683	2	Intergenic	novelGene_12	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCGGTTGTCTCTGTGTCTG	105300999	True	NA	NA	False	AATAAA	-14	NA	105301072	105307536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr14_+_105301289_105307069
transcript_45855.known	chr14	+	1178	8	FSM	ENSG00000182809.11	ENST00000329146.9	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	4.59369576880387	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTGTCTCTGCTTGTGGG	105474589	True	NA	4	True	AATAAA	-17	NA	105474820	105480162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105474906_105478265_105478361_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_45857.known	chr14	+	991	7	FSM	ENSG00000182809.11	ENST00000538259.2	991	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	30.601833641503	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCACACTGCCTC	105474586	True	NA	-91	True	NA	NA	NA	105474817	105480067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105474906_105478449_105478508_105478730_105478872_105478978_105479048_105479124_105479220_105479435_105479494_105479585
transcript_4586.known	chr1	+	1697	3	FSM	ENSG00000164002.12	ENST00000296380.9	1697	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	16.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGAACTGATGGTTT	40508301	True	NA	3	True	AATAAA	-17	NA	40508760	40516036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40508878_40509732_40509791_40514514
transcript_45865.known	chr14	+	677	6	FSM	ENSG00000213145.10	ENST00000409393.6	677	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.856406460551	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCCAGGCCACCCTAG	105486847	False	NA	NA	False	NA	NA	NA	105486866	105488947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105486973_105487212_105487300_105488165_105488261_105488330_105488389_105488470_105488517_105488662
transcript_45867.known	chr14	+	638	4	FSM	ENSG00000213145.10	ENST00000461556.1	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	2.49443825784929	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTGTACATGCGCG	105487453	False	NA	24	True	AGTAAA	-18	NA	105487853	105488789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_+_105488261_105488330_105488389_105488470_105488517_105488662
transcript_45868.known	chr14	-	627	1	FSM	ENSG00000225200.2	ENST00000392301.3	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTTGTTTTGTCTTCACC	NA	False	NA	NA	False	NA	NA	NA	105979146	105978519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr14_-_105978500_105979100
transcript_45873.known	chr15	+	582	6	FSM	ENSG00000170113.16	ENST00000557930.1	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	56.9048328351819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGAGAGCCCTCTGCCTG	22786792	False	NA	NA	False	NA	NA	NA	22786812	22823916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22814082_22814154_22820312_22820474_22823727
transcript_45876.known	chr15	+	6553	5	FSM	ENSG00000170113.16	ENST00000337435.9	6553	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	15.4656878282215	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTTGATTTTTTTTTT	22785499	True	NA	9	True	AATAAA	-21	NA	22786643	22829789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22786835_22810748_22810797_22812162_22812254_22820312_22820474_22823727
transcript_45879.known	chr15	+	4223	3	FSM	ENSG00000274253.6	ENST00000619879.6	4229	3	6	0	6	0	multi-exon	FALSE	canonical	3	8	junction_1	3	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCCCCATCTGCTCCTC	22757571	True	NA	NA	False	NA	NA	NA	22757840	22768189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22757995_22758818_22758922_22764223
transcript_4588.nic	chr1	+	827	6	NIC	ENSG00000117010.17	novel	2102	6	NA	NA	9	-358	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	22.0454076850486	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTATGAAACATTTCTTC	40530710	True	NA	NA	False	AATAAA	-21	NA	40531581	40544679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_40531788_40532732_40532809_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_45881.known	chr15	+	429	3	FSM	ENSG00000274253.6	ENST00000618814.1	429	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTAATCATTTTTATGTGT	22758223	False	NA	NA	False	AATATA	-20	NA	22758492	22764516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22758526_22758818_22758922_22764223
transcript_45882.known	chr15	+	1449	5	FSM	ENSG00000274253.6	ENST00000619611.4	1449	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.96865172858795	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTCTTTTTTTTCATT	22757587	True	NA	9	True	ATTAAA	-22	NA	22757856	22778741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22757995_22758818_22758922_22764223_22764359_22774215_22774314_22777766
transcript_45883.known	chr15	-	6826	31	FSM	ENSG00000273749.5	ENST00000617928.5	6826	31	0	0	0	0	multi-exon	TRUE	canonical	3	320	junction_28	37.0822059753731	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTCATGTGCTGAGGTCAT	-22973099	True	NA	NA	False	AATAAA	-14	NA	22980368	22867051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_22870193_22872824_22872973_22873490_22873730_22874549_22874645_22875198_22875272_22879912_22880044_22881845_22881937_22882867_22883012_22892889_22892978_22903705_22903906_22909193_22909314_22910519_22910629_22910736_22910814_22912178_22912276_22914725_22914883_22916476_22916631_22917787_22917936_22918691_22918859_22925981_22926108_22927905_22928029_22932222_22932341_22933801_22933894_22937103_22937209_22939191_22939321_22939410_22939508_22943172_22943355_22944557_22944660_22944861_22944940_22947002_22947093_22947168_22947292_22980286
transcript_45887.known	chr15	+	3227	8	FSM	ENSG00000140157.16	ENST00000337451.8	3227	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	295.130825366705	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTAGCACTTGAGATTG	22827144	True	NA	9	True	AATAAA	-21	NA	22838665	22868384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_4589.known	chr1	+	2102	6	FSM	ENSG00000117010.17	ENST00000648542.1	2102	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	22.5335305711289	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCAGTTGAGGAAAAGAA	40530701	True	NA	-51	True	NA	NA	NA	40531572	40548110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40532732_40532809_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_45891.known	chr15	+	2280	6	FSM	ENSG00000140157.16	ENST00000398013.7	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	433	junction_1	173.757762416532	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAGTTCTTATTCTAAAA	22827165	True	NA	8	True	AATAAA	-9	NA	22838686	22867716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22838922_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_45895.known	chr15	+	1691	6	FSM	ENSG00000140157.16	ENST00000674330.1	1691	6	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	336.056780916559	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTATGAAGTGAATTTGA	22827167	True	NA	10	True	ATTAAA	-14	NA	22838688	22866876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22839175_22851638_22851871_22853211_22853269_22858539_22858631_22860628_22860790_22866212
transcript_45898.known	chr15	+	4169	7	FSM	ENSG00000140157.16	ENST00000398014.7	4169	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	333.139610373789	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGGTGACCTCCATCCC	22827123	True	NA	NA	False	NA	NA	NA	22838644	22869362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_22838922_22839654_22839791_22845145_22845268_22851638_22851871_22858539_22858631_22860628_22860790_22866212
transcript_459.known	SIRV5	+	526	3	FSM	SIRV5A	SIRV503	526	3	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_2	5951.5	9465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTCGCTTGCCCAATTG	NA	False	NA	NA	False	NA	NA	NA	8201	11142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_8586_10858_10992_11133
transcript_4590.nnic	chr1	+	855	6	NNC	ENSG00000117010.17	novel	1028	5	NA	NA	26	-358	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	22.419634252146	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTATGAAACATTTCTTC	40530727	True	NA	NA	False	AATAAA	-21	NA	40531598	40544679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_40531788_40532025_40532147_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_45903.known	chr15	-	3744	23	FSM	ENSG00000275835.5	ENST00000615383.5	3744	23	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.2861855802456	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTATCCTTTTGCTGC	NA	False	NA	0	True	AATAAA	-19	NA	23039569	22999176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_22999867_23000568_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45907.nic	chr15	-	1182	9	ISM	ENSG00000275835.5	ENST00000620435.4	3342	22	-68	24289	-68	1550	5prime_fragment	FALSE	canonical	3	100	junction_8	5.34877322383367	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTGTGCATCTTTATA	NA	False	NA	NA	False	AAAAAG	-36	NA	23039640	23024572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45908.known	chr15	-	3342	22	FSM	ENSG00000275835.5	ENST00000620435.4	3342	22	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	12.4492621060096	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATCGTGTAGTTTTTGTAA	NA	False	NA	NA	False	AATAAA	-34	NA	23039572	23000283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_23000670_23003064_23003154_23004101_23004228_23005431_23005611_23006051_23006173_23006267_23006353_23008698_23008882_23009944_23010134_23011132_23011332_23017772_23018042_23019218_23019335_23021958_23022162_23023946_23024194_23024736_23024831_23026115_23026206_23027191_23027307_23030884_23031021_23031949_23032030_23032727_23032825_23036896_23037006_23037098_23037153_23039397
transcript_45914.known	chr15	-	1906	1	FSM	ENSG00000182636.8	ENST00000649030.2	1906	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	488	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCCCTTAAGTTTCT	-23682152	True	NA	NA	False	AATAAA	-13	NA	23687305	23685399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_23685400_23687300
transcript_45918.nnic	chr15	+	1411	6	NNC	ENSG00000259905.7	novel	1251	7	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.4	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGGCAGGCCATGAAG	NA	False	NA	NA	False	AGTAAA	-35	NA	24261040	24280569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_24261333_24261917_24261987_24274790_24274953_24276466_24276659_24278210_24278353_24280015
transcript_45920.nic	chr15	+	1330	5	NIC	ENSG00000259905.7	novel	1251	7	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGTGGCAGGCCATGAAG	NA	False	NA	NA	False	AGTAAA	-35	NA	24261052	24280569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_24261333_24274790_24274953_24276466_24276659_24278210_24278353_24280015
transcript_45929.nnic	chr15	+	483	3	NNC	ENSG00000128739.23	novel	525	5	NA	NA	6371	-72985	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGTGTTTTTTTTGCTG	24862898	True	NA	NA	False	AAGAAA	-26	NA	24862971	24895000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_24863103_24886515_24886590_24894722
transcript_45955.known	chr15	+	1605	12	FSM	ENSG00000128739.23	ENST00000400097.5	1605	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	3407.22137828776	2364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24856156	True	NA	21	True	AATAAA	-23	NA	24856550	24978582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24856717_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_4596.known	chr1	+	1028	5	FSM	ENSG00000117010.17	ENST00000372697.7	1028	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	16.1148223694833	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGCCAGGCTGATT	40530791	True	NA	NA	False	NA	NA	NA	40531662	40545037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40544396
transcript_4597.known	chr1	+	2019	5	FSM	ENSG00000117010.17	ENST00000372699.8	2019	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	7.46240577829965	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTCTGTTTTGCTTTTTC	40530765	True	NA	6	True	AATAAA	-17	NA	40531636	40548167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40531788_40533142_40533182_40540585_40540713_40541614_40541711_40546561
transcript_46082.known	chr15	+	1468	10	FSM	ENSG00000128739.23	ENST00000390687.9	1468	10	0	0	0	0	multi-exon	FALSE	canonical	3	7282	junction_5	263.817464018187	24850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCACTTTGTGCATTGAC	24828775	True	NA	8	True	GATAAA	-20	NA	24954986	24978723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_46083.known	chr15	+	1298	10	FSM	ENSG00000128739.23	ENST00000577565.1	1298	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	2420.75812020598	25350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAATAATAAATGCATAGA	24828793	True	NA	-13	True	NA	NA	NA	24955004	24978548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974287_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_46084.known	chr15	+	1304	10	FSM	ENSG00000128739.23	ENST00000346403.10	1304	10	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_3	2321.71193755549	2949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGTTGTATATATTTT	24828723	True	NA	22	True	AATAAA	-24	NA	24954934	24978583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24974386_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_46085.known	chr15	+	1763	12	FSM	ENSG00000128739.23	ENST00000554227.6	1763	12	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	3480.33846553906	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAATAATAGCTAATAATAA	24828736	True	NA	-22	True	NA	NA	NA	24954947	24978539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967028_24967153_24967931_24968083_24974310_24974457_24974641_24974958_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_46086.known	chr15	+	1751	13	FSM	ENSG00000128739.23	ENST00000400100.5	1751	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3613.6102868953	2336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTACTGTTGTATATATTT	24823444	True	NA	21	True	AATAAA	-23	NA	24823646	24978582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24823851_24829797_24829906_24886515_24886590_24920010_24920125_24962113_24962210_24967931_24968083_24974310_24974457_24975357_24975510_24976304_24976417_24976876_24977030_24977777_24977917_24978192_24978319_24978406
transcript_461.known	SIRV5	-	229	1	FSM	SIRV5B	SIRV512	229	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1145	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACATGTTAGACCTTTA	NA	False	NA	NA	False	AATATA	-23	NA	2406	2177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_-_2200_2400
transcript_46104.known	chr15	+	650	3	FSM	ENSG00000273173.5	ENST00000577949.5	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	7503	junction_1	270.5	660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTTTTCTGCCAGTAG	24828774	True	NA	NA	False	NA	NA	NA	24954985	24968408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931
transcript_46105.known	chr15	+	331	4	FSM	ENSG00000273173.5	ENST00000338327.4	331	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	3647.5855941522	2519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGATGTAGATTTATTTAG	24828802	True	NA	22	True	AATAAA	-23	NA	24955013	24968829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24968794
transcript_46106.known	chr15	+	796	7	FSM	ENSG00000273173.5	ENST00000580062.5	796	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	2862.41126500019	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACAGTACCCACCAGGA	24828792	True	NA	NA	False	NA	NA	NA	24955003	24977850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_24955063_24962113_24962210_24967931_24968083_24975357_24975510_24976304_24976417_24976876_24977030_24977777
transcript_46107.known	chr15	-	8728	13	FSM	ENSG00000114062.22	ENST00000648336.2	8728	13	0	0	0	0	multi-exon	TRUE	canonical	3	147	junction_10	123.619347415991	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTTGCTAGTATTTTG	-25435749	True	NA	0	True	CATAAA	-21	NA	25439024	25333727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25409087_25409208_25411907_25411972_25438488
transcript_46109.known	chr15	-	5025	11	FSM	ENSG00000114062.22	ENST00000649550.1	5025	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	88.5146315588558	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCTCTTCAGTTCTCA	-25435749	True	NA	-23	True	AATAAA	-13	NA	25439024	25337246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_25339258_25340084_25340229_25354352_25354427_25354527_25354684_25355891_25356057_25356690_25356897_25360382_25360528_25370565_25371813_25375464_25375764_25405460_25405503_25438488
transcript_4611.known	chr1	+	1536	11	FSM	ENSG00000066136.21	ENST00000425457.6	1536	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_8	99.1314279126453	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAAATATTTCTCCTTTTG	40689400	True	NA	37	True	ATTAAA	-38	NA	40691715	40771139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40766917_40766975_40769355_40769416_40770708
transcript_46112.known	chr15	-	5767	9	FSM	ENSG00000166206.15	ENST00000311550.10	5767	9	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_1	75.8649087193809	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAATGTGAAGACTGATT	-26773020	False	2952	-10	True	ATTAAA	-15	NA	26773066	26543551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26772882
transcript_46113.known	chr15	-	4494	9	FSM	ENSG00000166206.15	ENST00000299267.8	4494	9	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_8	277.973441851915	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTAGTCCTGTCTTTCCA	-26770836	True	NA	-19	True	AATAAA	-13	NA	26773788	26544784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26772401_26772470_26772680_26772773_26773644
transcript_46117.known	chr15	-	1900	7	FSM	ENSG00000166206.15	ENST00000400188.7	1900	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	343.437241557885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGGCTGGGGTGAGCC	-26628791	True	NA	NA	False	NA	NA	NA	26629090	26547188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26548135_26560931_26561177_26567580_26567734_26580318_26580457_26583331_26583415_26621313_26621535_26628976
transcript_46118.nnic	chr15	-	383	4	NNC	ENSG00000166206.15	novel	5876	10	NA	NA	10	5654	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	474.792820314527	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTCATTCATAATGA	-26770826	True	NA	NA	False	AATAAA	-28	NA	26773778	26766164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_26766254_26772401_26772470_26772680_26772773_26773644
transcript_46120.known	chr15	-	406	4	FSM	ENSG00000166206.15	ENST00000554722.1	406	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	467.786988560677	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCGCTGCTTCAGAGAGC	-26770799	True	NA	NA	False	NA	NA	NA	26773751	26771818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26771958_26772401_26772470_26772680_26772773_26773644
transcript_46124.known	chr15	-	340	1	FSM	ENSG00000278840.1	ENST00000621819.1	340	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGACTTTAGTGATAAT	-26557874	False	NA	-5	True	ATTAAA	-18	NA	26557937	26557597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_26557600_26557900
transcript_46125.known	chr15	+	2761	11	FSM	ENSG00000186297.12	ENST00000400081.7	2761	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	43.1768456467121	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATATAGGATTCTTTTTTT	26865047	True	NA	17	True	AATAAA	-20	NA	26867125	26949207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26867385_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_46127.known	chr15	+	2183	10	FSM	ENSG00000186297.12	ENST00000355395.9	2183	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	58.5139004272478	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGAAAGTACTGCATGATC	26866898	False	NA	NA	False	AATGAA	-32	NA	26866910	26948752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26867112_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_46134.known	chr15	+	2553	11	FSM	ENSG00000186297.12	ENST00000335625.10	2553	11	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	48.2684161745546	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATAGGATTCTTTTTTTT	26864983	True	NA	18	True	AATAAA	-21	NA	26867061	26949208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_26867112_26868728_26868794_26869174_26869335_26880845_26880968_26883165_26883234_26883336_26883558_26914802_26914886_26937184_26937329_26939924_26940078_26943214_26943427_26947933
transcript_46136.known	chr15	-	3068	23	FSM	ENSG00000104044.16	ENST00000353809.9	3068	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.10968687415761	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTTGGAGTAGTTTACAT	-28099282	True	NA	NA	False	AATAAA	-17	NA	28099312	27754874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_27755473_27844958_27845053_27851381_27851476_27871153_27871259_27871862_27871923_27926126_27926255_27951783_27951893_27955157_27955216_27957587_27957736_27966689_27966823_27983344_27983484_27985063_27985189_27986586_27986644_27989600_27989667_28014775_28014930_28016103_28016187_28018396_28018558_28022500_28022574_28024844_28024903_28027870_28028060_28032064_28032164_28081647_28081896_28099223
transcript_46137.nic	chr15	-	902	5	ISM	ENSG00000128731.18	ENST00000261609.13	15364	93	25	168779	-5	215	5prime_fragment	FALSE	canonical	3	54	junction_1	38.758869952567	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAGAGACAATGTCTTG	NA	False	NA	-25	True	AATAAA	-18	NA	28322154	28279818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_46141.known	chr15	-	15364	93	FSM	ENSG00000128731.18	ENST00000261609.13	15364	93	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_88	51.7251294081256	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAGGCTGAGCTTTCTTA	NA	False	NA	NA	False	AATAAA	-16	NA	28322179	28111039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_28112036_28113070_28113284_28113572_28113679_28114611_28114803_28115428_28115542_28116664_28116860_28117012_28117155_28121345_28121430_28124036_28124235_28125005_28125194_28130162_28130303_28130502_28130595_28132099_28132262_28132652_28132831_28135477_28135693_28141431_28141631_28141730_28141847_28142237_28142394_28142826_28142953_28143872_28143992_28144076_28144236_28144672_28144805_28146236_28146345_28152676_28152831_28163093_28163286_28167686_28167828_28168406_28168591_28169483_28169656_28174394_28174621_28175511_28175657_28176427_28176600_28176686_28176769_28176949_28177128_28177418_28177510_28178886_28179031_28179141_28179224_28182400_28182513_28186576_28186753_28190964_28191057_28191138_28191245_28191960_28192152_28196214_28196355_28196460_28196570_28198377_28198504_28198600_28198770_28201455_28201555_28202112_28202250_28202346_28202615_28206239_28206383_28211001_28211146_28212444_28212584_28213741_28213973_28214075_28214273_28214654_28214803_28215620_28215803_28218488_28218672_28220451_28220645_28222027_28222216_28228217_28228410_28229194_28229347_28229459_28229597_28229673_28229848_28230366_28230501_28233145_28233342_28233433_28233562_28233663_28233797_28234069_28234285_28236962_28237114_28238113_28238218_28238601_28238773_28245880_28246067_28246741_28246898_28248551_28248737_28254339_28254519_28255871_28255997_28256088_28256318_28257060_28257262_28260776_28260971_28262917_28263170_28265617_28265732_28265816_28265975_28268464_28268617_28269247_28269437_28270694_28270869_28272214_28272387_28272893_28273005_28274290_28274448_28274904_28275006_28280067_28280288_28292887_28293023_28299401_28299517_28321361_28321465_28322074
transcript_46142.known	chr15	-	491	3	FSM	ENSG00000128731.18	ENST00000563945.1	491	3	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_1	40	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTGTGGATGATGGGAT	NA	False	NA	NA	False	NA	NA	NA	28322119	28320121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_28320465_28321361_28321465_28322074
transcript_46144.known	chr15	-	471	3	FSM	ENSG00000128731.18	ENST00000564383.1	471	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	14	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAAATATAAAATTCAGAC	-28299452	True	NA	NA	False	AATAAA	-24	NA	28299483	28280033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_28280288_28292887_28293023_28299401
transcript_46145.known	chr15	+	409	1	FSM	ENSG00000256338.2	ENST00000544920.2	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44288	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAATTATCT	NA	False	NA	6	True	AATAAA	-19	NA	28315650	28316059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_28315600_28316100
transcript_46150.known	chr15	+	3351	5	FSM	ENSG00000261377.6	ENST00000566178.5	3351	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	21.7987958383026	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTTGGTTTTGGG	28831720	True	NA	NA	False	AATATA	-41	NA	28832320	28859007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_28832461_28833275_28833379_28838687_28838823_28846738_28846837_28856132
transcript_46154.nnic	chr15	+	532	4	NIC	ENSG00000261377.6	novel	3351	5	NA	NA	17	-2741	combination_of_known_splicesites	FALSE	canonical	3	6	junction_3	19.5675468285856	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTAATGTGTTTCTTTAAA	28831700	True	NA	NA	False	CATAAA	-17	NA	28832300	28856266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_28832461_28833275_28833379_28838687_28838823_28856132
transcript_46155.known	chr15	+	480	3	FSM	ENSG00000261377.6	ENST00000563144.2	581	3	96	5	49	-5	multi-exon	FALSE	canonical	3	47	junction_2	0.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTTATGTGTACAGTT	28831779	True	NA	39	True	AATATA	-26	NA	28832379	28838983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_28832461_28833275_28833379_28838687
transcript_46159.nnic	chr15	+	826	2	NNC	ENSG00000034053.15	novel	3138	15	NA	NA	44490	-8	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGAAAACTCCATATTTAT	NA	False	NA	24	True	AATAAA	-16	NA	29115147	29117709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_29115326_29117061
transcript_4616.known	chr1	+	1911	10	FSM	ENSG00000066136.21	ENST00000456393.6	1911	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_9	80.8580527304363	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTAGAGTCTGGGTTTCT	40689427	True	NA	16	True	AATAAA	-14	NA	40691742	40771601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40691868_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770711
transcript_46161.known	chr15	-	7950	28	FSM	ENSG00000104067.17	ENST00000346128.10	7950	28	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	162.161175728287	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCCTTTGAGTCTGGCT	NA	False	NA	1	True	TATAAA	-16	NA	29822503	29699366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_29701690_29704221_29704306_29705527_29705746_29708558_29709037_29710830_29711001_29716610_29716839_29718020_29718119_29718265_29719139_29719776_29720017_29720357_29720709_29726378_29726480_29726780_29726992_29727936_29728020_29732432_29732529_29732630_29732816_29733093_29733314_29734273_29734383_29737263_29737415_29741330_29741437_29742641_29742782_29761138_29761287_29761600_29761770_29762334_29762439_29766265_29766543_29772063_29772167_29773232_29773358_29800645_29800703_29822001
transcript_46163.nic	chr15	-	566	4	ISM	ENSG00000104067.17	ENST00000495972.6	2890	9	200	13181	166	-13181	5prime_fragment	FALSE	canonical	3	498	junction_1	26.5497436689865	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTGGGAAAAATGCAAAAATT	-29821836	True	NA	-20	True	NA	NA	NA	29822302	29772083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_29772167_29773232_29773358_29800645_29800703_29822001
transcript_46164.known	chr15	-	803	2	FSM	ENSG00000104067.17	ENST00000485381.1	803	2	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATCAGT	NA	False	NA	NA	False	NA	NA	NA	29743029	29741021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_29741437_29742641
transcript_46165.known	chr15	+	1451	1	FSM	ENSG00000259523.1	ENST00000557989.1	1451	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	29822630	29824081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_29822600_29824100
transcript_46168.known	chr15	+	1148	3	FSM	ENSG00000225930.4	ENST00000648232.1	1148	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCAGTTCTTAACTTTT	30195771	False	NA	NA	False	AATACA	-19	NA	30195808	30217552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30196115_30199274_30199332_30216767
transcript_46173.known	chr15	+	2351	1	FSM	ENSG00000270055.1	ENST00000602663.1	2351	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGTTTTCTGGTTTGA	NA	False	NA	NA	False	AATAAA	-16	NA	30487962	30490313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30488000_30490300
transcript_46174.known	chr15	+	573	6	FSM	ENSG00000260128.6	ENST00000561753.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	2.1540659228538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAACAGTCCCAGAACTCC	NA	False	NA	NA	False	TTTAAA	-37	NA	30572764	30600107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30573017_30579287_30579413_30582893_30582958_30585877_30585925_30596659_30596739_30600101
transcript_46175.known	chr15	+	798	4	FSM	ENSG00000260128.6	ENST00000569682.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.78423336480244	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCGCACAACTGCACTTCAC	30572957	False	NA	NA	False	NA	NA	NA	30572968	30600647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30573017_30579287_30579413_30596659_30596739_30600101
transcript_46184.nic	chr15	+	1516	6	NIC	ENSG00000285077.3	novel	589	5	NA	NA	78	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_5	62.1784528594914	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAAAGAAAAGAAATTG	NA	False	NA	NA	False	NA	NA	NA	30626043	30635387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079_30635189_30635308
transcript_46186.nic	chr15	+	1634	5	ISM	ENSG00000285077.3	ENST00000689358.1	2164	8	277	4405	78	0	5prime_fragment	TRUE	canonical	3	71	junction_4	46.2763438486664	59	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAGAAAAGAAAT	NA	False	NA	NA	False	NA	NA	NA	30626043	30635385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_30626950_30630702_30630774_30633489_30633587_30634169_30634424_30635079
transcript_46195.known	chr15	-	499	1	FSM	ENSG00000270016.1	ENST00000602595.1	499	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTATGGACCAGGTACGGT	NA	False	NA	NA	False	AATAAA	-13	NA	30608193	30607694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_30607700_30608200
transcript_46196.known	chr15	+	3542	15	FSM	ENSG00000198690.10	ENST00000664837.1	3542	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	63.1949122855275	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATAAATATTTGCAAAAC	30899992	True	NA	NA	False	AATAAA	-1	NA	30903903	30943084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904025_30904511_30904591_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_46197.known	chr15	+	4849	15	FSM	ENSG00000198690.10	ENST00000362065.9	4849	15	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_10	27.8047125648931	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTCATGAATGCCTT	30900003	True	NA	NA	False	AATAAA	-25	NA	30903914	30943108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613_30910816_30913857_30914092_30918163_30918296_30920544_30920654_30922234_30922355_30925126_30925292_30925788_30925940_30928552_30928657_30929202_30929398_30930542_30930672_30937118_30937260_30941565
transcript_46199.known	chr15	+	2157	4	FSM	ENSG00000198690.10	ENST00000658773.1	2157	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	97.8059302905504	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACGTAACAATTTACCAAAA	30899952	True	NA	NA	False	NA	NA	NA	30903863	30911212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30903895_30904511_30905898_30908117_30908259_30910613
transcript_462.known	SIRV5	+	2473	1	FSM	SIRV5A	SIRV504	2473	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1746	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCATGTAAAACATTTGTT	NA	False	NA	NA	False	NA	NA	NA	11133	13606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_11100_13600
transcript_4620.known	chr1	+	2363	10	FSM	ENSG00000066136.21	ENST00000372652.5	2363	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	92.6216250780495	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGAGTCTGGGTTTCTGT	40708136	True	NA	18	True	AATAAA	-16	NA	40709356	40771603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770396
transcript_46201.known	chr15	+	2304	4	FSM	ENSG00000198690.10	ENST00000565466.5	2304	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	29.8477618740315	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTTTCAGTTGAAAATTAC	30899981	True	NA	NA	False	NA	NA	NA	30903892	30911271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_30904012_30904511_30905898_30908117_30908259_30910613
transcript_46204.nnic	chr15	-	569	3	NNC	ENSG00000166912.17	novel	4985	16	NA	NA	-31	-25738	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	27	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTCTTTTATTCTGAGA	-30991444	True	NA	NA	False	AATAAA	-23	NA	30991659	30986618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_30986914_30990776_30990838_30991446
transcript_46207.known	chr15	-	4985	16	FSM	ENSG00000166912.17	ENST00000435680.6	4985	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_10	9.88736567544662	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGTTGTCAGTATGAAAT	-30991616	False	NA	-21	True	AATAAA	-18	NA	30991628	30938940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_30942073_30942889_30943073_30947129_30947301_30948301_30948472_30951967_30952039_30953561_30953632_30954762_30954894_30958862_30958952_30959033_30959122_30960880_30961074_30967919_30968011_30974313_30974457_30974930_30975004_30976818_30976956_30990776_30990838_30991446
transcript_46212.nnic	chr15	-	1040	3	NNC	ENSG00000134160.15	novel	986	3	NA	NA	-12542	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCAATATACAGTCTTC	NA	False	NA	NA	False	AATAAA	-19	NA	31080634	31069389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_31070227_31076904_31076985_31080511
transcript_46214.known	chr15	+	1450	2	FSM	ENSG00000259448.3	ENST00000559292.2	1450	2	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTGATTCCTGCATTA	NA	False	NA	NA	False	NA	NA	NA	31216019	31220720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_31216038_31219288
transcript_46218.known	chr15	+	1788	8	FSM	ENSG00000175344.19	ENST00000437966.3	1788	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.55928946018454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTCCAATAATTGACTG	32029880	True	NA	NA	False	AATAAA	-15	NA	32030555	32168888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_4622.known	chr1	+	1202	10	FSM	ENSG00000066136.21	ENST00000372651.5	1202	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	72.9139523304316	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCTAGGACACTGGTGCAC	40708322	False	NA	NA	False	NA	NA	NA	40709542	40770940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40709617_40738835_40738949_40747533_40747606_40749572_40749687_40753150_40753247_40758120_40758295_40762887_40763047_40766595_40766704_40769355_40769416_40770708
transcript_46220.known	chr15	+	6149	10	FSM	ENSG00000175344.19	ENST00000306901.9	6149	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	3.93778781037097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCGTAGTTTTGTAATAT	32029839	True	NA	NA	False	AATAAA	-27	NA	32030514	32173018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32030650_32030897_32031038_32101302_32101348_32111789_32111900_32153906_32153987_32157607_32157776_32158411_32158607_32159568_32159656_32163225_32163336_32167939
transcript_46221.nnic	chr15	-	331	3	Antisense	novelGene_ENSG00000279912.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGAGTGCGTCTTGTGTTCTG	NA	False	NA	NA	False	AATAAA	-16	NA	32203707	32181887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_-_32182049_32182606_32182693_32203623
transcript_46228.known	chr15	+	5876	12	FSM	ENSG00000198826.11	ENST00000361627.8	5876	12	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_11	24.829667671844	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTTATCTAATAACAAC	32614982	True	NA	10	True	AATAAA	-14	NA	32615503	32639941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_46232.nic	chr15	+	2316	12	NIC	ENSG00000198826.11	novel	2422	11	NA	NA	-56	0	combination_of_known_junctions	TRUE	canonical	3	24	junction_1	87.8173348349895	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	NA	False	NA	6	True	ATTAAA	-15	NA	32615447	32636181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_32615608_32615804_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_46234.known	chr15	+	2422	11	FSM	ENSG00000198826.11	ENST00000567348.5	2422	11	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	20.9057408383439	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCATGTGCTTGGGTAT	32615017	True	NA	6	True	ATTAAA	-15	NA	32615538	32636181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776
transcript_46251.known	chr15	-	434	2	FSM	ENSG00000262728.6	ENST00000613931.1	434	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCACTCTGGCTTTGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	32614714	32586104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_32586261_32614436
transcript_46252.known	chr15	+	2279	11	FSM	ENSG00000198826.11	ENST00000563864.5	2279	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	90.9274436020281	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATACTTTATTAGAATTAAAT	32615043	True	NA	-27	True	NA	NA	NA	32615564	32636148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32616341_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32633062_32633109_32633932_32634042_32635776
transcript_46253.known	chr15	+	3152	13	FSM	ENSG00000198826.11	ENST00000543522.5	3152	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	112.172826725351	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATGATGTACATGTTAGT	32615049	True	NA	12	True	AATAAA	-23	NA	32615570	32637903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32615608_32615804_32615919_32620107_32620179_32623491_32623589_32624172_32624427_32625079_32625244_32625486_32625634_32628727_32628803_32629594_32629763_32632978_32633109_32633932_32634042_32635776_32635916_32636256
transcript_46259.known	chr15	+	1238	6	FSM	ENSG00000166922.9	ENST00000300175.9	1198	6	-34	-6	0	0	multi-exon	FALSE	canonical	3	65	junction_3	31.891064579283	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32691709_32691764_32696513
transcript_46261.known	chr15	+	1235	6	FSM	ENSG00000166922.9	ENST00000413748.6	1235	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	22.6061938415117	1162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGAGTTTTCTTTTTAAA	32639463	True	NA	31	True	AATAAA	-21	NA	32641675	32697098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32691709_32691764_32696513
transcript_46265.known	chr15	+	949	5	FSM	ENSG00000166922.9	ENST00000497208.5	949	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	56.38705525207	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGATTTCTTGCA	32639489	True	NA	10	True	AATAAA	-14	NA	32641701	32696889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684556_32684670_32696513
transcript_46269.known	chr15	+	1148	5	FSM	ENSG00000166922.9	ENST00000494364.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	55.1968069728675	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTGGCATATGGAGTTT	32639486	True	NA	21	True	AATAAA	-11	NA	32641698	32697088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32641779_32643585_32643819_32679765_32679916_32684559_32684670_32696513
transcript_46276.nnic	chr15	+	740	3	NNC	ENSG00000166922.9	novel	1148	5	NA	NA	-86	-24643	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	55.5	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTATTTCTTTTTACTTTT	32641577	False	NA	NA	False	ATTAAA	-14	NA	32641589	32667120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_32641779_32643585_32643819_32666802
transcript_46277.known	chr15	+	659	4	FSM	ENSG00000166922.9	ENST00000471027.1	659	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	39.6063967897443	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCCAGAAAGTCTGTCCT	32641410	False	NA	NA	False	NA	NA	NA	32643622	32691909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_32643819_32679765_32679916_32684556_32684670_32691709
transcript_46278.known	chr15	-	479	3	FSM	ENSG00000259446.6	ENST00000561458.5	479	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTAGTCTCATTCTT	NA	False	NA	NA	False	TATAAA	-19	NA	33310246	33303656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_33303939_33306331_33306432_33310149
transcript_46279.known	chr15	-	506	5	FSM	ENSG00000134153.10	ENST00000528949.1	506	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	314.762906804471	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAAAAGTGGGGCTGGCAA	-34093565	False	NA	NA	False	AGTAAA	-4	NA	34101807	34084363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101764
transcript_46280.known	chr15	-	581	4	FSM	ENSG00000134153.10	ENST00000527822.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	346.218941647559	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTCCAGAGCTGGCATTT	-34093565	False	NA	NA	False	AGTAAA	-38	NA	34101807	34084329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34101603
transcript_46281.known	chr15	-	1069	5	FSM	ENSG00000134153.10	ENST00000256545.9	1069	5	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	29.7405447159261	3903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCTTTCTTTTTTTTTAC	-34093620	True	NA	3	True	ATTAAA	-23	NA	34101862	34084016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34084487_34088052_34088134_34090316_34090456_34095894_34096015_34101603
transcript_46289.nic	chr15	-	1782	11	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	0	151	combination_of_known_junctions	FALSE	canonical	3	25	junction_10	133.519137205121	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207115	True	NA	-2	True	ATTAAA	-20	NA	34210096	34141810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34177820_34178000_34209950
transcript_46296.known	chr15	-	2740	10	FSM	ENSG00000134152.11	ENST00000256544.8	2740	10	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_4	33.5592345297419	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGTAGTTATCACTGTC	-34207115	True	NA	-1	True	GATAAA	-23	NA	34210096	34140673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_463.known	SIRV5	+	885	4	FSM	SIRV5A	SIRV509	885	4	0	0	0	0	multi-exon	FALSE	canonical	3	1119	junction_3	5326.59080046098	9746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATAGTAACCTTGGTAAC	NA	False	NA	NA	False	AGTAAA	-10	NA	8315	11866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV5_+_8382_8454_8586_10858_10992_11311
transcript_4630.known	chr1	+	2947	20	FSM	ENSG00000171793.16	ENST00000649124.1	2947	20	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	128.304843883576	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAATCAGTAAGGCAGAAC	40972594	True	NA	NA	False	NA	NA	NA	40979720	41012539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40980885_40981044_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_46301.nnic	chr15	-	1519	10	NNC	ENSG00000134152.11	novel	2740	10	NA	NA	-12	151	at_least_one_novel_splicesite	FALSE	canonical	3	39	junction_7	104.526209129872	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207127	True	NA	-2	True	ATTAAA	-20	NA	34210108	34141810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34142372_34145397_34145492_34146760_34146851_34147199_34147290_34147379_34147431_34148631_34148751_34152789_34152974_34154643_34154685_34163559_34163691_34209950
transcript_4631.known	chr1	+	2840	19	FSM	ENSG00000171793.16	ENST00000650070.2	2840	19	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.1136306503947	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTTGCTTCTCATTCT	40972569	True	NA	NA	False	AATAAA	-22	NA	40979695	41012565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_46341.nic	chr15	-	1372	7	NIC	ENSG00000134152.11	novel	2740	10	NA	NA	0	151	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	138.800416265786	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATACTGTGTATGTAAAATG	-34207115	True	NA	-2	True	ATTAAA	-20	NA	34210096	34141810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_34142372_34145397_34145492_34148631_34148751_34152789_34153070_34154643_34154685_34163559_34163691_34209950
transcript_46349.known	chr15	-	1553	1	FSM	ENSG00000134152.11	ENST00000560915.1	1553	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTGAGTGGTTATTCTG	-34207088	True	NA	NA	False	AATAAA	-33	NA	34210069	34208516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34208500_34210100
transcript_46350.known	chr15	-	7286	25	FSM	ENSG00000140199.13	ENST00000290209.9	7286	25	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	5.51261180284708	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGGGTTATGGTATAGT	-34318097	True	NA	-6	True	AATAAA	-20	NA	34318779	34229995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34233973_34235180_34235315_34236014_34236200_34236707_34236816_34237418_34237551_34238231_34238402_34238964_34239161_34240660_34240830_34241232_34241338_34242101_34242222_34243973_34244073_34245284_34245404_34245692_34245868_34250297_34250356_34250630_34250730_34250898_34251058_34252169_34252385_34254347_34254590_34255261_34255393_34256228_34256284_34257641_34257789_34258812_34258945_34260925_34261021_34275344_34275390_34318560
transcript_46357.known	chr15	+	852	4	FSM	ENSG00000128463.13	ENST00000249209.8	852	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_3	570.579237851034	2229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAAAGTTGCACAAGT	34208344	True	NA	13	True	AATAAA	-22	NA	34225012	34230147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34225201_34225535_34225651_34227692_34227847_34229752
transcript_46358.known	chr15	+	1006	5	FSM	ENSG00000128463.13	ENST00000558205.5	1006	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	548.5	960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAAGTTCCTTATTT	34208368	True	NA	22	True	AATAAA	-31	NA	34225036	34230156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34225201_34225535_34225659_34227692_34227847_34228428_34228590_34229752
transcript_4636.known	chr1	+	2855	18	FSM	ENSG00000171793.16	ENST00000498694.2	2855	18	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_11	25.4841018355912	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAAGGCAGAACAAGAGAC	40972614	True	NA	NA	False	AATAAA	-3	NA	40979740	41012546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41007448_41007546_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_46360.known	chr15	-	436	2	FSM	ENSG00000182117.6	ENST00000557912.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	-34321070	True	NA	-25	True	ATTAAA	-20	NA	34343123	34341718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34342051_34343019
transcript_46361.known	chr15	-	507	2	FSM	ENSG00000182117.6	ENST00000328848.6	507	2	0	0	0	0	multi-exon	FALSE	canonical	3	6080	junction_1	0	42842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTATTTTGTGAGTTGTT	-34321083	True	NA	-25	True	ATTAAA	-20	NA	34343136	34341718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34342109_34343019
transcript_46371.known	chr15	-	2165	14	FSM	ENSG00000176454.15	ENST00000314891.11	2165	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_3	28.9173480414695	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTACCATTCCATATT	-34365462	True	NA	NA	False	ATTAAA	-13	NA	34367196	34358632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34359303_34359588_34359746_34360110_34360210_34361399_34361533_34362195_34362322_34362572_34362656_34362781_34362837_34363421_34363457_34363660_34363720_34364012_34364074_34364193_34364307_34365007_34365229_34365558_34365702_34366986
transcript_4638.known	chr1	+	2648	18	FSM	ENSG00000171793.16	ENST00000648914.1	2648	18	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	97.6320328623268	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGCATAGCTACGTGGCAC	40972578	True	NA	NA	False	NA	NA	NA	40979704	41012479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008715_41008793_41008891_41009444_41009590_41010160_41010255_41011657
transcript_46384.nic	chr15	-	1171	3	ISM	ENSG00000176454.15	ENST00000566581.5	915	4	-25	470	-5	191	5prime_fragment	FALSE	canonical	3	155	junction_2	13.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAGATAACAGAAACTT	-34365467	True	NA	NA	False	NA	NA	NA	34367201	34364415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_34365229_34365558_34365702_34366986
transcript_46385.nic	chr15	-	1701	8	ISM	ENSG00000215252.12	ENST00000484716.5	6114	23	-16	11161	-16	8043	5prime_fragment	FALSE	canonical	3	26	junction_7	29.8779831573522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAGAAGAAAGGAATTAT	-34582641	False	1113	NA	False	AATAGA	-23	NA	34582876	34536814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
transcript_46390.known	chr15	-	6114	23	FSM	ENSG00000215252.12	ENST00000484716.5	6114	23	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_22	33.4521985342796	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGTGGCTAATAGTGGTA	-34582625	False	1113	NA	False	AATAAA	-20	NA	34582860	34525653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34582749
transcript_46391.known	chr15	-	5607	24	FSM	ENSG00000215252.12	ENST00000683415.1	5607	24	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_14	35.7378609739633	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATGGGGTGAAAAAGTTA	-34582538	True	NA	NA	False	AATAAA	-21	NA	34583651	34525094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34527835_34527921_34528078_34528188_34528290_34528371_34528473_34528606_34528751_34529017_34529275_34529661_34529750_34529966_34530075_34530181_34530269_34531268_34531379_34531474_34531560_34531647_34531696_34531960_34532000_34532845_34532963_34534053_34534174_34535864_34535990_34537343_34537648_34544857_34544954_34545377_34545427_34546934_34546983_34551137_34551277_34552894_34553092_34553744_34553957_34583515
transcript_46393.known	chr15	-	1382	7	FSM	ENSG00000159251.8	ENST00000290378.6	1382	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	18.9443629845104	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAAGCCTCTCGTTTGTTT	-34794766	True	NA	NA	False	AATAAA	-23	NA	34795549	34790229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34790556_34791113_34791296_34792089_34792282_34792407_34792570_34793244_34793570_34794679_34794831_34795505
transcript_46396.known	chr15	-	9597	35	FSM	ENSG00000021776.11	ENST00000156471.10	9597	35	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_24	42.1609722119245	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-34961651	True	NA	0	True	AGTAAA	-21	NA	34969742	34851781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34857107_34860041_34860156_34862866_34863042_34867523_34867610_34870751_34870923_34873827_34874000_34874676_34874865_34875934_34876007_34882501_34882640_34884524_34884735_34886525_34886662_34890214_34890325_34893662_34893774_34896896_34896967_34897558_34897706_34900621_34900864_34904335_34904506_34906544_34906713_34910134_34910314_34915037_34915180_34918257_34918379_34920331_34920435_34927034_34927139_34930257_34930372_34932317_34932435_34934570_34934636_34938736_34938814_34940898_34941000_34942011_34942081_34944287_34944429_34948263_34948385_34952884_34952921_34960773_34960815_34964233_34964291_34969538
transcript_46401.nnic	chr15	-	678	4	NNC	ENSG00000021776.11	novel	9597	35	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	201.776003418532	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTCTGGCTTTCTGTTCT	-34961741	True	NA	0	True	AGTAAA	-21	NA	34969832	34851781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34852068_34960773_34960815_34964233_34964291_34969538
transcript_46404.nnic	chr15	-	667	3	NNC	ENSG00000021776.11	novel	9597	35	NA	NA	-90	-15533	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	214.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGTACGTGTATAAT	-34961741	True	NA	NA	False	AAAAAG	-7	NA	34969832	34963666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34963983_34964233_34964291_34969538
transcript_46406.known	chr15	+	315	1	FSM	ENSG00000231409.3	ENST00000491307.1	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	44	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGTGTCATCTTTTATTAT	NA	False	NA	NA	False	NA	NA	NA	34943079	34943394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_34943100_34943400
transcript_46415.known	chr15	-	5439	3	FSM	ENSG00000198146.4	ENST00000356321.4	5439	3	0	0	0	0	multi-exon	FALSE	canonical	3	1513	junction_1	26	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-34977698	True	NA	-3	True	AATAAA	-16	NA	34988287	34978340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34983491_34987556_34987674_34988115
transcript_46419.nnic	chr15	-	1689	2	NNC	ENSG00000198146.4	novel	5439	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	92	junction_1	0	513	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGCCTTTTTTTTGGGG	-34977707	True	NA	-3	True	AATAAA	-16	NA	34988296	34978340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_34979849_34988115
transcript_4642.known	chr1	+	1607	13	FSM	ENSG00000171793.16	ENST00000463285.6	1607	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	116.323065449444	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAAAGCAGTTTGACTTT	40972631	True	NA	10	True	AATAAA	-15	NA	40979757	41004250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41003980
transcript_46422.known	chr15	-	563	2	FSM	ENSG00000198146.4	ENST00000559564.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACCACAGAGGAAAGATGG	-34977636	True	NA	NA	False	AAGAAA	-28	NA	34988225	34983037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_34983491_34988115
transcript_46429.nnic	chr15	-	492	3	NNC	ENSG00000289289.1	novel	530	3	NA	NA	0	52671	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	8.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATATTTCTTTTAGGACTT	-35061883	True	NA	NA	False	AATAAA	-5	NA	35062161	35003863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_35004232_35061939_35062000_35062097
transcript_46438.known	chr15	-	2098	9	FSM	ENSG00000134146.12	ENST00000256538.9	2098	9	0	0	0	0	multi-exon	FALSE	canonical	2	110	junction_1	29.6497786669648	670	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGTTTTTGTGTGAAGATA	-35544084	True	NA	-4	True	AATAAA	-22	NA	35546165	35370879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_35372204_35373520_35373609_35381821_35381917_35410834_35410897_35450684_35450804_35454746_35454821_35538273_35538468_35542412_35542508_35546118
transcript_46446.known	chr15	-	3648	4	FSM	ENSG00000134146.12	ENST00000440392.3	3648	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	92.6318879580173	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTCCTGGTTTCTTCATGT	-35544111	True	NA	NA	False	AATAAA	-15	NA	35546192	35518993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_35522279_35538273_35538468_35542412_35542508_35546118
transcript_46452.known	chr15	+	2240	12	FSM	ENSG00000186073.14	ENST00000437989.6	2240	12	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_11	27.6940188070628	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578585	False	NA	NA	False	AATAAA	-16	NA	36579843	36810244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323_36808490_36808903
transcript_46454.known	chr15	+	1250	11	FSM	ENSG00000186073.14	ENST00000570265.6	1250	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	31.3725995097633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGTAACAAACATTTCT	36578375	True	NA	NA	False	AATAAA	-19	NA	36579633	36747241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36746934
transcript_46455.known	chr15	+	2872	11	FSM	ENSG00000186073.14	ENST00000566621.6	2872	11	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_7	12.0847010720166	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTTGCGTTTTGTATTT	36578367	True	NA	NA	False	AATAAA	-16	NA	36579625	36810244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_46459.known	chr15	+	2506	10	FSM	ENSG00000186073.14	ENST00000642817.1	2506	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	31.1626557133873	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAACTTCTGTTTCAGTAT	36578393	True	NA	NA	False	ATTAAA	-44	NA	36579651	36809950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_36579962_36645222_36645288_36654097_36654159_36657832_36657906_36691684_36691765_36692125_36692176_36697322_36697391_36709222_36709289_36709855_36709962_36808323
transcript_4646.known	chr1	+	2019	17	FSM	ENSG00000171793.16	ENST00000480420.6	2019	17	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_13	100.613120416773	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTATTTTATTATGCGGA	40972561	True	NA	NA	False	TTTAAA	-15	NA	40979687	41011754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_40979830_40983277_40983457_40984820_40984992_40987371_40987473_40988593_40988711_40991164_40991249_40991764_40991846_40995916_40996069_40997393_40997527_41001028_41001118_41002159_41002255_41003113_41003177_41006050_41006095_41008658_41008891_41009444_41009590_41010160_41010255_41011657
transcript_46466.nic	chr15	+	860	4	ISM	ENSG00000186073.14	ENST00000643837.1	558	6	-42	13619	0	-3344	5prime_fragment	FALSE	canonical	3	89	junction_1	5.73488351136175	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACTGCTGTTATAAAAATG	36578386	True	NA	NA	False	AGTAAA	-29	NA	36579644	36654529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_36579962_36644277_36644324_36645222_36645288_36654097
transcript_46468.known	chr15	-	942	1	FSM	ENSG00000236914.4	ENST00000560198.1	942	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGACTTTGTGTCAC	-38072940	False	NA	NA	False	AAAAAG	-19	NA	38072959	38072017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_38072000_38073000
transcript_46469.nnic	chr15	-	347	2	Antisense	novelGene_ENSG00000166068.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	0	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGGCGCTAAACCAGTCA	NA	False	NA	NA	False	AATAAA	-16	NA	38253686	38250724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_-_38250952_38253566
transcript_46471.nnic	chr15	+	1195	8	NNC	ENSG00000171262.11	novel	4388	8	NA	NA	-31	-407	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_7	4.33777898591114	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTCTTAGTGAAATGGG	38445257	True	NA	NA	False	TATAAA	-17	NA	38454095	38483258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291_38481460_38483026
transcript_46472.known	chr15	+	3111	7	FSM	ENSG00000171262.11	ENST00000491535.5	3111	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	4.25897744639355	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	38445315	True	NA	NA	False	NA	NA	NA	38454153	38483665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_38454233_38464031_38464178_38465268_38465404_38470226_38470406_38473504_38473586_38474181_38474299_38481291
transcript_46473.nic	chr15	+	392	3	ISM	ENSG00000171262.11	ENST00000491535.5	3111	7	-58	18288	-31	-5285	5prime_fragment	FALSE	canonical	3	13	junction_2	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGACTGTTTGAAAC	38445257	True	NA	21	True	ATTAAA	-15	NA	38454095	38465377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_38454233_38464031_38464178_38465268
transcript_46474.nic	chr15	+	268	2	ISM	ENSG00000171262.11	ENST00000491535.5	3111	7	-58	19503	-31	-6500	5prime_fragment	FALSE	canonical	3	15	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCACGTCTGCTGGTATT	38445257	True	NA	NA	False	AATAAA	-24	NA	38454095	38464162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_38454233_38464031
transcript_46476.known	chr15	-	789	2	FSM	ENSG00000259345.7	ENST00000558277.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATCCAGCAATCCCGTTAC	-39420564	False	NA	NA	False	AATGAA	-17	NA	39420709	39419029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_39419653_39420543
transcript_46479.known	chr15	-	2816	12	FSM	ENSG00000150667.8	ENST00000350221.4	2816	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	2.60958183534679	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGTTTTTGCTGGCACAT	-39782677	True	NA	NA	False	AATAAA	-22	NA	39782841	39600030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_39600927_39617734_39618246_39713443_39713582_39726588_39726748_39738090_39738202_39739664_39739790_39741804_39741901_39763820_39763915_39765591_39765747_39770426_39770611_39776398_39776532_39782627
transcript_46483.nic	chr15	-	1048	4	ISM	ENSG00000150667.8	ENST00000350221.4	2816	12	-12	165211	-12	-25577	5prime_fragment	FALSE	canonical	2	8	junction_2	3.29983164553722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAATTTCCTCTAAGAT	-39782689	True	NA	NA	False	NA	NA	NA	39782853	39765241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_39765747_39770426_39770611_39776398_39776532_39782627
transcript_46486.known	chr15	-	3912	3	FSM	ENSG00000166073.11	ENST00000561100.2	3912	3	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	35	520	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAGTTTTATGAGCTATA	-39914110	True	NA	NA	False	AATAAA	-28	NA	39920266	39799007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_39802255_39807005_39807259_39919854
transcript_46487.known	chr15	+	3047	1	FSM	ENSG00000261136.1	ENST00000564211.1	3047	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGTCTCTTCACTGTT	NA	False	NA	23	True	AATAAA	-19	NA	39782570	39785617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39782600_39785600
transcript_46488.known	chr15	+	2730	2	FSM	ENSG00000246863.2	ENST00000499797.2	2730	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTGTTGGTTCTGTT	39920992	True	NA	NA	False	AATAAA	-19	NA	39921041	39924899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39921659_39922786
transcript_46493.nic	chr15	+	613	5	ISM	ENSG00000128829.12	ENST00000559624.5	3548	11	11	21465	11	7069	5prime_fragment	TRUE	canonical	3	388	junction_4	54.172756067972	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAAATGGCTAAGCAG	39928589	True	NA	56	True	GATAAA	-15	NA	39934156	39953964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_39934340_39939504_39939618_39943382_39943486_39949115_39949269_39953903
transcript_46494.known	chr15	+	687	4	FSM	ENSG00000128829.12	ENST00000560648.1	687	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	224.206749824056	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACATTGATTTCTACAGA	39928608	True	NA	NA	False	AATAAA	-20	NA	39934175	39946895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_39934340_39939504_39939618_39943382_39943486_39946588
transcript_46506.known	chr15	-	468	4	FSM	ENSG00000140319.11	ENST00000560773.5	468	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4172.88903385758	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGTTTTCACATAAGAT	-39967696	True	NA	NA	False	NA	NA	NA	40039156	40036242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40039092
transcript_46509.known	chr15	-	780	4	FSM	ENSG00000140319.11	ENST00000558720.5	780	4	0	0	0	0	multi-exon	FALSE	canonical	3	7942	junction_1	667.834477163982	44796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTGTCTCTTTATTCCT	-39967590	False	NA	-25	True	ATTAAA	-15	NA	40039050	40036041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875
transcript_4651.known	chr1	-	363	2	FSM	ENSG00000010803.16	ENST00000488592.1	363	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATGAATTTTCCAGATTG	-41241596	True	NA	NA	False	NA	NA	NA	41242154	41185983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_41186251_41242058
transcript_46510.known	chr15	-	1119	5	FSM	ENSG00000140319.11	ENST00000267884.11	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	7515	junction_4	758.788961108423	62611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTCATTACAGCCAAGGG	-39967721	True	NA	42	True	NA	NA	NA	40039181	40035689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40038281_40038395_40038875_40038949_40039092
transcript_46511.known	chr15	-	791	6	FSM	ENSG00000140319.11	ENST00000558527.5	791	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3878.28268180647	2315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTCTCTTTATTCCTT	-39967704	True	NA	-24	True	ATTAAA	-16	NA	40039164	40036040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40036501_40036985_40037019_40037308_40037349_40038281_40038395_40038875_40038949_40039092
transcript_46521.known	chr15	+	669	4	FSM	ENSG00000248508.9	ENST00000560341.2	669	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.7973274814304	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCCTCCTAATTTT	40038846	True	NA	NA	False	TATAAA	-23	NA	40039348	40057000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40056452_40056642_40056729
transcript_46523.known	chr15	+	1058	4	FSM	ENSG00000248508.9	ENST00000667323.1	1058	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	10.6249183003395	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038788	True	NA	NA	False	ATTAAA	-19	NA	40039290	40065705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40064295_40064602_40065220
transcript_46525.known	chr15	+	879	4	FSM	ENSG00000248508.9	ENST00000668306.2	942	4	60	3	0	0	multi-exon	FALSE	canonical	1	6	junction_2	11.4697670227235	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTGGATTCTCTGTTTCC	40038802	True	NA	NA	False	ATTAAA	-19	NA	40039304	40065705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40064460_40064602_40065220
transcript_46529.known	chr15	+	568	3	FSM	ENSG00000248508.9	ENST00000660446.2	613	3	45	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	11.5	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCCTCCTAATTTTTCC	40038802	True	NA	NA	False	TATAAA	-26	NA	40039304	40057003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40056688
transcript_4653.known	chr1	-	5225	13	FSM	ENSG00000198815.9	ENST00000361346.6	5225	13	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_8	25.2535751044393	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACAACACTGATTGGTCT	-42330012	True	NA	-12	True	AATAAA	-19	NA	42335235	42176547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42179826_42181916_42182025_42188736_42188929_42189302_42189405_42191302_42191720_42194889_42195065_42199101_42199231_42205761_42205864_42227882_42227967_42265114_42265190_42278347_42278673_42311049_42311111_42335058
transcript_46530.nnic	chr15	+	579	3	NIC	ENSG00000248508.9	novel	669	4	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTTTTCCTCCTAATTTT	40038747	True	NA	NA	False	TATAAA	-23	NA	40039249	40057000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_40039449_40045960_40046070_40056729
transcript_46532.known	chr15	+	2538	3	FSM	ENSG00000248508.9	ENST00000504245.7	2560	3	22	0	5	0	multi-exon	FALSE	canonical	3	8	junction_2	13	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTTTTATGTTTAATAGTT	40038793	True	NA	-6	True	AATAAA	-6	NA	40039295	40067496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40039449_40045960_40046070_40065220
transcript_4654.nnic	chr1	-	603	3	NNC	ENSG00000198815.9	novel	1326	8	NA	NA	-2	-13491	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	58	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTTAAGTGAAATTTAT	-42330014	True	NA	NA	False	AAAAAG	-5	NA	42335237	42278421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_42278785_42311049_42311111_42335058
transcript_46540.nic	chr15	+	358	2	ISM	ENSG00000248508.9	ENST00000660446.2	613	3	-10	10884	5	-10881	5prime_fragment	FALSE	canonical	3	34	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAGAAAAGCTAGGTTTC	40038747	True	NA	NA	False	TATAAA	-21	NA	40039249	40046119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_40039449_40045960
transcript_46543.known	chr15	+	3669	23	FSM	ENSG00000156970.13	ENST00000287598.11	3669	23	0	0	0	0	multi-exon	TRUE	canonical	3	655	junction_5	71.8729509230014	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGCTTCTAACATGTCA	40139772	True	NA	15	True	AATAAA	-16	NA	40161068	40221123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536_40170682_40176476_40176674_40183713_40183884_40185164_40185380_40185550_40185643_40196544_40196775_40199614_40199728_40200243_40200360_40200930_40200981_40202404_40202466_40202588_40202695_40206183_40206459_40208636_40208771_40209634_40209776_40210109_40210211_40212498_40212649_40213331_40213475_40217495_40217668_40218455_40218563_40220563
transcript_4656.known	chr1	+	10577	5	FSM	ENSG00000177181.15	ENST00000431473.4	10577	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_4	21.7313138121007	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCATGTTTGCAATTTACT	42378319	True	NA	NA	False	ATTAAA	-19	NA	42380791	42424232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42381098_42399403_42399635_42404510_42404598_42409983_42410188_42414483
transcript_46566.nic	chr15	+	702	4	ISM	ENSG00000156970.13	ENST00000559414.5	526	5	-56	5785	-36	166	5prime_fragment	FALSE	canonical	3	882	junction_2	16.2138486760204	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAAACAGCCATTTTGAAC	40160968	False	NA	NA	False	ATTAAA	-44	NA	40160986	40170765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_40161256_40165052_40165197_40170061_40170122_40170536
transcript_46569.known	chr15	-	1763	8	FSM	ENSG00000137841.12	ENST00000543785.3	1763	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.46842876301653	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTCGATGTCAGGCTG	-40307785	False	NA	NA	False	AGTAAA	-17	NA	40307910	40300666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40301610_40301956_40302033_40302135_40302190_40302269_40302350_40302468_40302610_40303287_40303357_40304000_40304079_40307588
transcript_46580.known	chr15	+	1388	9	FSM	ENSG00000128944.14	ENST00000561169.5	1388	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	162.536870817055	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATGAAACAATACACCTTG	40376044	True	NA	25	True	AATAAA	-32	NA	40382978	40394160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40383045_40383227_40383323_40386361_40386495_40387158_40387207_40389488_40389612_40389835_40389930_40391492_40391555_40391948_40392024_40393468
transcript_46581.known	chr15	+	665	3	FSM	ENSG00000128944.14	ENST00000559591.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	228.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCTAGTCAATGAAGAGTG	40376006	True	NA	2	True	AATACA	-15	NA	40382940	40384922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40383045_40383227_40383323_40384456
transcript_46589.known	chr15	+	4350	12	FSM	ENSG00000128928.10	ENST00000487418.8	4350	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGCAGCCTGAGTGGTAA	40397959	True	NA	NA	False	AATAAA	-36	NA	40405794	40421308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_46592.nic	chr15	+	1754	12	NIC	ENSG00000128928.10	novel	4665	12	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_11	143.468889708012	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTACTTGTCTCTC	NA	False	NA	11	True	CATAAA	-14	NA	40405742	40435947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40435416
transcript_46600.known	chr15	+	4251	11	FSM	ENSG00000128928.10	ENST00000479013.7	4251	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	154.590555985804	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAATGAACCATGCAGCCT	40397959	True	NA	NA	False	AATAAA	-27	NA	40405794	40421299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_46602.nic	chr15	+	2280	10	NIC	ENSG00000128928.10	novel	4665	12	NA	NA	-52	-662	combination_of_known_junctions	FALSE	canonical	3	53	junction_7	147.692707343555	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAGCTAAATGGAAAT	NA	False	NA	NA	False	NA	NA	NA	40405742	40417513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40415400_40415483_40416077_40416183_40416289
transcript_46609.known	chr15	+	4665	12	FSM	ENSG00000128928.10	ENST00000651168.1	4665	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_7	64.4371690899793	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGAGTGGTAAATGGA	NA	False	NA	NA	False	AATAAA	-41	NA	40405484	40421313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407635_40407726_40407938_40407991_40410627_40410798_40411259_40411354_40411554_40411692_40412990_40413088_40414888_40414983_40415400_40415483_40416077_40416183_40416289_40416363_40418129
transcript_4661.known	chr1	+	685	2	FSM	ENSG00000186409.18	ENST00000468651.2	685	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACGTGTAGACCTTTTTT	42463257	False	NA	38	True	ATTAAA	-39	NA	42463268	42473417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42463658_42473121
transcript_46611.known	chr15	+	668	5	FSM	ENSG00000128928.10	ENST00000610693.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	204.977285326936	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAGGCCACTCTCAACT	40397959	True	NA	NA	False	NA	NA	NA	40405794	40411351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40405972_40407635_40407813_40407938_40407991_40410627_40410798_40411259
transcript_46612.known	chr15	+	2175	1	FSM	ENSG00000169105.8	ENST00000306243.7	2175	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	471	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGCATTTCTGTGATTT	40470508	True	NA	17	True	AATAAA	-17	NA	40470983	40473158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40471000_40473200
transcript_46613.known	chr15	-	677	5	FSM	ENSG00000128891.16	ENST00000559911.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.4579628340439	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCATCACTTCCTCACTTT	-40563731	True	NA	NA	False	NA	NA	NA	40565011	40534899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40535011_40539238_40539356_40557215_40557373_40562771_40563028_40564975
transcript_46617.nnic	chr15	-	1226	4	NNC	ENSG00000128891.16	novel	1075	3	NA	NA	-136	8102	at_least_one_novel_splicesite	TRUE	canonical	2	3	junction_1	27.6445694888204	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACGAAGTACTTTTATTATA	NA	False	NA	NA	False	AATAAA	-20	NA	40565193	40520580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_40521176_40557215_40557373_40562771_40563028_40564975
transcript_46622.known	chr15	-	814	4	FSM	ENSG00000128891.16	ENST00000558750.5	814	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	27.1334152332916	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	-40563700	True	NA	NA	False	AGTAAA	-29	NA	40564980	40553941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40554128_40557215_40557373_40562771_40563028_40564765
transcript_46623.known	chr15	-	557	4	FSM	ENSG00000128891.16	ENST00000559103.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	26.6624996744283	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGACGAGCCAGCAGCCGGG	-40563734	True	NA	NA	False	NA	NA	NA	40565014	40554017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40554128_40557215_40557373_40562771_40563023_40564975
transcript_46626.known	chr15	-	343	3	FSM	ENSG00000128891.16	ENST00000560109.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	31	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATTTTCAGTACCCTGT	-40563755	True	NA	NA	False	TTTAAA	-13	NA	40565035	40561980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40562008_40562771_40563028_40564975
transcript_46627.known	chr15	-	1075	3	FSM	ENSG00000128891.16	ENST00000558871.1	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGATCTGCCTGCCTCGGC	-40563762	True	NA	NA	False	NA	NA	NA	40565042	40556620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40557373_40562771_40563028_40564975
transcript_46629.known	chr15	+	2365	3	FSM	ENSG00000166133.18	ENST00000315616.12	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	6	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTATGTCTCTGTTTCCCTT	40565776	True	NA	13	True	TATAAA	-21	NA	40569298	40574949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40569944_40571603_40571901_40573526
transcript_4663.known	chr1	-	1530	8	FSM	ENSG00000066185.13	ENST00000372565.8	1530	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	1.48461497791618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTCTATTCTTAATTCC	-42455993	True	NA	NA	False	AATAAA	-17	NA	42456022	42430328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42448466_42448639_42449917_42450060_42455887
transcript_46631.known	chr15	+	1558	3	FSM	ENSG00000166133.18	ENST00000559271.1	1558	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	94	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGAGGACGGGCTTCTAA	40565809	True	NA	-75	True	NA	NA	NA	40569331	40574358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40569761_40571603_40571901_40573526
transcript_46634.known	chr15	+	631	1	FSM	ENSG00000166133.18	ENST00000616318.1	631	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	52	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTTCTCGCTTTCATTTGG	40565914	False	NA	22	True	ATTAAA	-18	NA	40569436	40570067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40569400_40570100
transcript_46636.known	chr15	+	5923	10	FSM	ENSG00000137812.21	ENST00000533001.1	5923	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.2716406192758	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTTATTTTGCCAA	40591610	True	NA	NA	False	NA	NA	NA	40594264	40626042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40594393_40602914_40602967_40605109_40605150_40606392_40606453_40608846_40608909_40610244_40610298_40611477_40611512_40615340_40615379_40618958_40619012_40620639
transcript_4664.known	chr1	-	1503	7	FSM	ENSG00000066185.13	ENST00000611861.4	1503	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.11476292340825	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTCTTCCAACGATGCATG	NA	False	NA	NA	False	ATTAAA	-26	NA	42456253	42430414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42430859_42433142_42433289_42435273_42435386_42436420_42436544_42439855_42440026_42449917_42450060_42455887
transcript_46646.known	chr15	-	1242	4	FSM	ENSG00000245849.8	ENST00000650326.1	1242	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.24264068711928	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGTTTTATGGCTCA	-40694079	True	NA	-86	True	AATAAA	-4	NA	40695093	40686242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40687147_40687798_40687845_40694585_40694796_40695011
transcript_46649.known	chr15	-	718	3	FSM	ENSG00000245849.8	ENST00000533146.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGCTGGACGGAACAGAG	-40694082	True	NA	NA	False	NA	NA	NA	40695096	40686723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40687147_40694585_40694796_40695011
transcript_46651.known	chr15	-	1151	2	FSM	ENSG00000245849.8	ENST00000499988.2	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATAAGCTGGGCGTGGTG	-40694093	True	NA	NA	False	NA	NA	NA	40695107	40693740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40694796_40695011
transcript_46652.known	chr15	-	1962	3	FSM	ENSG00000245849.8	ENST00000526635.2	1962	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACCCAGCTTTAAAATT	-40694087	True	NA	-26	True	NA	NA	NA	40695101	40686182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40687845_40694585_40694796_40695011
transcript_46653.known	chr15	+	2436	10	FSM	ENSG00000051180.17	ENST00000267868.8	2436	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_5	33.6301598913979	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGTTGCCTTGTGGCCCCC	40691125	True	NA	3	True	AATAAA	-15	NA	40695173	40732340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_46654.known	chr15	+	1611	9	FSM	ENSG00000051180.17	ENST00000423169.6	1611	9	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_8	94.4202705990615	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGTCTGCACAGATTC	40695098	False	NA	17	True	AATAAA	-24	NA	40695128	40731592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40718804_40718900_40728710_40728825_40729504_40729635_40731054
transcript_46655.known	chr15	+	1545	9	FSM	ENSG00000051180.17	ENST00000525066.5	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_5	100.622360213821	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAAAATAAAATGCCTCA	40691138	True	NA	-18	True	ACTAAA	-39	NA	40695186	40731557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40695426_40698756_40698846_40701063_40701202_40706176_40706295_40709024_40709117_40728710_40728825_40729504_40729635_40729852_40729975_40731054
transcript_46656.known	chr15	-	2246	13	FSM	ENSG00000137824.16	ENST00000338376.8	2246	13	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_12	20.4944098069043	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752487	True	NA	-17	True	AATAAA	-16	NA	40755254	40735886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755082
transcript_46657.nic	chr15	-	2140	13	NIC	ENSG00000137824.16	novel	2246	13	NA	NA	-10	0	intron_retention	TRUE	canonical	3	27	junction_12	40.8400504679196	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCTCTTTATTCTTACTT	-40752497	True	NA	-17	True	AATAAA	-16	NA	40755264	40735886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_40736595_40737123_40737205_40737287_40737342_40737627_40737727_40737964_40738043_40738500_40738577_40740132_40740194_40744046_40744150_40744976_40745260_40751425_40751570_40751985_40752179_40754596_40754791_40755198
transcript_46672.known	chr15	+	2775	11	FSM	ENSG00000166140.17	ENST00000355341.8	2775	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	30.3922687537472	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGCATCACTTTTGGT	40806810	True	NA	NA	False	TATAAA	-22	NA	40807088	40815084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_46678.known	chr15	+	1555	10	FSM	ENSG00000166140.17	ENST00000299173.14	1555	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.8442328730529	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGCATCTCATTTCTACA	40807311	False	NA	27	True	AATAAA	-19	NA	40807589	40814569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807869_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_4668.known	chr1	+	966	3	FSM	ENSG00000127125.9	ENST00000372562.1	966	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	321	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACCTGATATGATGTCA	42456085	False	NA	NA	False	NA	NA	NA	42456116	42460081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42456500_42457246_42457351_42459602
transcript_46686.known	chr15	+	626	3	FSM	ENSG00000137880.6	ENST00000559445.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	286	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGAGTGGCTGCGCCTGT	40757637	False	NA	7	True	AATAAA	-7	NA	40764126	40767699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764217_40765859_40765922_40767225
transcript_46688.known	chr15	+	695	3	FSM	ENSG00000137880.6	ENST00000559932.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	284	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGCGGCCCTGGCGCGT	40764408	False	NA	-50	True	NA	NA	NA	40764425	40767642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764609_40765826_40765922_40767225
transcript_46690.known	chr15	+	727	3	FSM	ENSG00000137880.6	ENST00000260447.6	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	17.5	2725	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40757578	True	NA	16	True	AATAAA	-16	NA	40764067	40767708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40764217_40765826_40765922_40767225
transcript_46691.known	chr15	-	3721	11	FSM	ENSG00000104129.10	ENST00000220496.9	3721	11	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_1	12.1692234756372	612	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAATCACTTTGGGGGGC	-40802711	True	NA	NA	False	AATAAA	-19	NA	40807473	40765160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40768063_40773726_40773838_40774355_40774437_40775030_40775109_40775552_40775597_40776195_40776293_40776541_40776628_40779222_40779311_40779544_40779604_40779927_40779998_40807368
transcript_46692.known	chr15	+	785	2	FSM	ENSG00000137880.6	ENST00000558467.1	785	2	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	0	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCGCCTGTGCTCTGCTT	40765602	False	NA	16	True	AATAAA	-16	NA	40765619	40767708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40765922_40767225
transcript_46693.known	chr15	+	571	6	FSM	ENSG00000166140.17	ENST00000567756.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	33.6059518538011	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGACACAGGATCTGCTAA	40806594	True	NA	NA	False	NA	NA	NA	40807733	40810683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807869_40809155_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648
transcript_46694.known	chr15	+	1486	11	FSM	ENSG00000166140.17	ENST00000561768.5	1486	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	29.8866190794476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCCTGGCACTTAGTGG	40806628	True	NA	-21	True	NA	NA	NA	40807767	40814521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40807822_40809118_40809241_40809407_40809459_40809851_40809971_40810070_40810217_40810648_40810758_40812698_40812903_40813337_40813418_40813712_40813812_40813942_40814071_40814147
transcript_46695.known	chr15	-	750	4	FSM	ENSG00000166143.10	ENST00000299174.10	750	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCAATGGAGTGTGGAACA	NA	False	NA	NA	False	GATAAA	-17	NA	40828708	40815450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40815762_40815961_40815995_40816169_40816254_40828386
transcript_46700.known	chr15	-	629	4	FSM	ENSG00000261183.6	ENST00000568419.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	76.8389368889382	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAACTTTTGGAATGCATTC	-40844269	False	NA	-4	True	AATAAA	-20	NA	40844284	40835996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40836283_40838032_40838126_40838542_40838687_40844178
transcript_46701.nnic	chr15	-	1302	3	NNC	ENSG00000261183.6	novel	643	3	NA	NA	-263	0	intron_retention	FALSE	canonical	3	12	junction_1	76	238	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	-40844657	False	NA	0	True	AATAAA	-24	NA	40844672	40835992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_40836283_40838168_40838687_40844178
transcript_46702.known	chr15	-	643	3	FSM	ENSG00000261183.6	ENST00000564302.5	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	67	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGAATGCATTCACTG	-40842347	True	NA	0	True	AATAAA	-24	NA	40844387	40835992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40836283_40838542_40838687_40844178
transcript_46705.known	chr15	-	629	2	FSM	ENSG00000261183.6	ENST00000565315.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTTACAAAAATGTTCAGC	-40842292	True	NA	NA	False	TATAAA	-38	NA	40844332	40835807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40836283_40844178
transcript_46706.known	chr15	-	470	2	FSM	ENSG00000261183.6	ENST00000568525.2	579	2	109	0	-16	0	multi-exon	FALSE	canonical	3	164	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTAAAAGCCCACTAATTC	-40842260	True	NA	61	True	AATAAA	-19	NA	40844300	40838338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40838687_40844178
transcript_46708.known	chr15	-	1650	3	FSM	ENSG00000104140.7	ENST00000220507.5	1650	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	2	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCGTTGTCTCTGTCA	-40873793	True	NA	-4	True	AATAAA	-17	NA	40874234	40872213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_40873502_40873683_40873743_40873931
transcript_46709.known	chr15	+	163	1	FSM	ENSG00000274798.1	ENST00000612411.1	163	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCATATGTTTGCAT	40874350	False	NA	NA	False	ATTAAA	-25	NA	40874432	40874595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40874400_40874600
transcript_46711.nnic	chr15	+	2096	5	NNC	ENSG00000104142.11	novel	3875	5	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	63.8097758968013	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	40891775	True	NA	15	True	ATTAAA	-15	NA	40894422	40903975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40899209_40902615
transcript_46713.known	chr15	+	3875	5	FSM	ENSG00000104142.11	ENST00000220509.10	3875	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	11.5839328382031	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGTGGCTTTGTGTCGATG	40891802	True	NA	15	True	ATTAAA	-15	NA	40894449	40903975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40894860_40895937_40896080_40898906_40898999_40899143_40901015_40902615
transcript_46715.nic	chr15	+	1418	2	ISM	ENSG00000104142.11	ENST00000558855.5	1050	5	-110	2560	-108	-2560	5prime_fragment	FALSE	canonical	3	166	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAACTGTTTAGGAGT	NA	False	NA	NA	False	AAAAAG	-13	NA	40894341	40896837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_40894860_40895937
transcript_46716.known	chr15	+	1204	4	FSM	ENSG00000128965.13	ENST00000444189.7	1204	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	92.6534762794503	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCACTCCAGTGCACAAGA	40952939	True	NA	NA	False	GGGGCT	-43	NA	40952961	40955822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40953815_40954227_40954264_40955372_40955415_40955549
transcript_46717.known	chr15	+	1520	3	FSM	ENSG00000128965.13	ENST00000617768.5	1520	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	2.5	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGCTGTGCCGGAATGT	40951379	True	NA	12	True	CATAAA	-13	NA	40953470	40956512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_40953815_40954227_40954264_40955372
transcript_4672.known	chr1	+	2269	3	FSM	ENSG00000127125.9	ENST00000372561.4	2269	3	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_1	53	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGACTGAAATACTTC	42450905	True	NA	16	True	AATAAA	-26	NA	42456542	42461236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42457074_42457246_42457351_42459602
transcript_46720.nnic	chr15	-	358	3	NNC	ENSG00000178997.12	novel	2942	10	NA	NA	-3	-11564	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	1.5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGGCTGTTTTCTTTTT	-41230721	True	NA	NA	False	AATAAA	-23	NA	41230760	41228686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_41228850_41230478_41230595_41230681
transcript_46721.nnic	chr15	-	442	2	NNC	ENSG00000178997.12	novel	2942	10	NA	NA	0	-11564	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAAGGGCTGTTTTCTTTTT	-41230718	True	NA	NA	False	AATAAA	-23	NA	41230757	41228686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_41228850_41230478
transcript_46723.known	chr15	+	3201	7	FSM	ENSG00000187446.12	ENST00000334660.10	3201	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_4	8.05536398239638	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTTGTCCATTTTACA	41225541	True	NA	NA	False	AATAAA	-21	NA	41231267	41281887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41278766_41278890_41279335
transcript_46724.nic	chr15	+	737	6	NIC	ENSG00000187446.12	novel	568	6	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	26.7686383665662	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATTTTATGAGGCTAGCG	41225526	True	NA	3	True	AATAAA	-22	NA	41231252	41272375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_41231450_41243666_41243740_41256909_41256991_41262755_41262884_41270556_41270619_41272179
transcript_46726.nic	chr15	+	899	2	ISM	ENSG00000187446.12	ENST00000560784.5	717	7	-127	34630	-45	-18656	5prime_fragment	FALSE	canonical	3	59	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAGCGGAACTATGACAA	41230986	False	NA	NA	False	NA	NA	NA	41231094	41244210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_41231450_41243666
transcript_4673.known	chr1	+	641	3	FSM	ENSG00000127125.9	ENST00000471420.1	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	269.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGCTATCACTGTATA	42456765	False	NA	6	True	ATTAAA	-20	NA	42456800	42473385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42457074_42457246_42457351_42473121
transcript_46744.known	chr15	+	1269	4	FSM	ENSG00000247556.6	ENST00000558945.5	1269	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	320.599785125041	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCGTGAGGCTGAGGCA	41259287	True	NA	NA	False	AATAGA	-40	NA	41283989	41298781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284289_41285224_41285364_41286010_41286101_41298040
transcript_46748.known	chr15	+	8829	4	FSM	ENSG00000247556.6	ENST00000500949.6	8829	4	0	0	0	0	multi-exon	FALSE	canonical	3	607	junction_3	59.4194132137525	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCATTGTGTGTCGTTACT	41259302	True	NA	15	True	AATAAA	-28	NA	41284004	41306534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41298040
transcript_46749.known	chr15	+	1384	5	FSM	ENSG00000247556.6	ENST00000501665.2	1384	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	355.502812928393	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCTTTGGTACAGGATCAG	41259329	True	NA	NA	False	AATAAA	-18	NA	41284031	41309737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719
transcript_46750.known	chr15	+	1482	4	FSM	ENSG00000247556.6	ENST00000557993.5	1482	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	336.11539023906	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCTTTGTATGTATATGT	41259328	True	NA	16	True	AATAAA	-18	NA	41284030	41289155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41287982
transcript_46751.known	chr15	+	2347	15	FSM	ENSG00000285920.2	ENST00000668616.1	2347	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	748.84973357102	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTCTAACATTGCTTAC	41259304	True	NA	8	True	AATAAA	-10	NA	41284006	41380790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41284111_41285224_41285364_41286010_41286101_41308566_41308625_41308719_41308842_41342385_41342455_41349097_41349242_41350987_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46752.known	chr15	-	1201	5	FSM	ENSG00000104147.9	ENST00000220514.8	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_2	30.1081384346492	2154	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAATTTGTCTTTTTCAGT	-41328195	True	NA	NA	False	AATAAA	-15	NA	41332591	41309272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41309850_41313272_41313355_41319657_41319781_41331914_41331982_41332239
transcript_46753.known	chr15	+	2256	11	FSM	ENSG00000137804.14	ENST00000560747.5	2256	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	561.82278344688	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318874	True	NA	21	True	AATAAA	-22	NA	41332885	41381050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365404_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46754.known	chr15	+	2232	11	FSM	ENSG00000137804.14	ENST00000560177.5	2232	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_3	570.235600431962	566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCATTCTTTGTAAACATAA	41318901	True	NA	21	True	AATAAA	-22	NA	41332912	41381050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41333051_41342385_41342455_41349097_41349242_41350990_41351130_41356038_41356141_41358148_41358259_41365401_41365590_41371526_41371685_41375711_41375829_41377195_41377305_41380092
transcript_46755.known	chr15	+	5021	18	FSM	ENSG00000137815.15	ENST00000389629.9	5030	18	9	0	9	0	multi-exon	FALSE	canonical	1	192	junction_16	95.4835807186304	2171	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTGAGTCTAAGGATT	41412662	True	NA	NA	False	AATAAA	-25	NA	41417103	41483563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41417314_41438320_41438432_41452900_41453049_41457671_41457877_41464770_41464886_41466140_41466253_41470256_41470393_41471171_41471350_41474619_41474703_41475524_41475613_41475711_41475820_41476445_41476524_41477164_41477287_41477457_41477516_41478547_41478626_41479102_41479199_41480213_41480326_41480580
transcript_46757.known	chr15	-	1482	6	FSM	ENSG00000137806.10	ENST00000678745.1	1482	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	65.9193446569366	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTAACCCAAGGCTTTTT	-41401347	True	NA	-57	True	NA	NA	NA	41402492	41387469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41387594_41388447_41388523_41394264_41394359_41394858_41395045_41396486_41397141_41402143
transcript_46761.known	chr15	-	1509	5	FSM	ENSG00000137806.10	ENST00000260361.9	1509	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	42.0260335982353	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGGCTAGTATGTATTC	-41401351	True	NA	-2	True	AATAAA	-23	NA	41402496	41387352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41387594_41388447_41388523_41394858_41395045_41396486_41397141_41402143
transcript_46771.known	chr15	-	1469	4	FSM	ENSG00000137806.10	ENST00000679240.1	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	66.1261420821347	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	-41401315	True	NA	NA	False	NA	NA	NA	41402460	41394046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41394359_41394858_41395045_41396486_41397141_41402143
transcript_46776.known	chr15	-	4663	25	FSM	ENSG00000103932.12	ENST00000304330.9	4663	25	0	0	0	0	multi-exon	TRUE	canonical	3	180	junction_24	34.9132854369221	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATCTGGACTGATTTCA	-41536888	True	NA	-4	True	AATAAA	-21	NA	41544257	41517175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41517692_41517797_41517858_41518005_41518183_41520390_41521148_41521737_41521881_41522097_41522251_41522764_41522961_41523244_41523355_41523770_41523973_41524095_41524255_41524990_41525149_41526897_41527069_41527166_41527302_41527422_41527606_41527859_41528028_41528234_41528337_41529469_41529569_41529863_41529980_41531022_41531203_41534713_41534936_41535511_41535633_41536128_41536219_41536500_41536650_41536944_41537202_41544218
transcript_46781.known	chr15	+	332	2	FSM	ENSG00000259838.1	ENST00000566760.1	332	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAATAAATTATAATAAACT	NA	False	NA	NA	False	NA	NA	NA	41557026	41557435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41557169_41557245
transcript_46786.known	chr15	+	1409	8	FSM	ENSG00000243789.11	ENST00000397299.9	1409	8	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	26.6664965980971	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGTATGTCCTTTTTTTTT	41825860	True	NA	15	True	AATAAA	-13	NA	41828091	41837581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41828189_41834739_41834894_41834969_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_46789.known	chr15	+	1192	7	FSM	ENSG00000243789.11	ENST00000408047.5	1192	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	55.876848714134	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTGTCCTGTCAGTAAAG	41825870	True	NA	NA	False	NA	NA	NA	41828101	41837452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_41828189_41834893_41835224_41835587_41835645_41836147_41836244_41836474_41836552_41836780_41836941_41837067
transcript_46798.known	chr15	-	511	1	FSM	ENSG00000278493.1	ENST00000622261.1	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTTTAGCTGTATTTAT	NA	False	NA	-1	True	AATATA	-16	NA	41908714	41908203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_41908200_41908700
transcript_46800.known	chr15	-	4832	25	FSM	ENSG00000166887.16	ENST00000318006.10	4832	25	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_15	22.7516788147356	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTCTCTTATTTCTCC	-42202881	True	NA	NA	False	AATAAA	-27	NA	42208304	42158700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42160830_42161681_42161774_42162031_42162167_42162331_42162482_42163349_42163396_42163625_42163729_42164357_42164487_42164995_42165114_42165717_42165817_42166158_42166233_42166562_42166650_42166771_42166914_42167393_42167538_42169723_42169867_42173722_42173853_42178217_42178339_42178449_42178571_42184516_42184701_42187270_42187364_42187757_42187857_42189113_42189209_42191124_42191168_42191495_42191561_42199895_42199962_42208080
transcript_46801.known	chr15	-	593	3	FSM	ENSG00000166887.16	ENST00000568357.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	10.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGTGGTCCCTTTTTATTA	-42202884	True	NA	NA	False	NA	NA	NA	42208307	42191260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42191561_42199895_42199962_42208080
transcript_46806.known	chr15	-	3049	19	FSM	ENSG00000103978.16	ENST00000448392.5	3049	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	84.9517837102645	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTCTAGATTGTCTTA	NA	False	NA	NA	False	NA	NA	NA	42273584	42210451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42211750_42217802_42217834_42218322_42218379_42219580_42219643_42220061_42220136_42226805_42226910_42227710_42227770_42228711_42228821_42231191_42231261_42233212_42233307_42236319_42236420_42237431_42237616_42239669_42239732_42244049_42244168_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42273254
transcript_4681.known	chr1	+	984	3	FSM	ENSG00000127125.9	ENST00000372556.3	984	3	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	250.5	730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTTTGTTTTGTTTGAAA	42450923	True	NA	23	True	AATAAA	-33	NA	42456560	42460414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42456629_42457246_42457351_42459602
transcript_46816.known	chr15	-	750	7	FSM	ENSG00000103978.16	ENST00000568432.1	750	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	125.139144777146	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGAATGTAAGTTAGGC	-42273061	False	3884	NA	False	NA	NA	NA	42273078	42258790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42272888
transcript_46819.nic	chr15	+	1809	6	NIC	ENSG00000214013.10	novel	1437	5	NA	NA	-8	-89	combination_of_known_junctions	FALSE	canonical	3	21	junction_5	15.4790180567115	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATCAACACTATGCTT	42273054	True	NA	17	True	AATAAA	-21	NA	42273224	42284300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_42273612_42274167_42274511_42276347_42276411_42278481_42278591_42280916_42281134_42283610
transcript_4682.known	chr1	+	1617	2	FSM	ENSG00000127125.9	ENST00000472013.1	1617	2	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATGTTTTGTTTTGTTTGA	42450906	True	NA	21	True	AATAAA	-31	NA	42456543	42460412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42457351_42459602
transcript_46828.known	chr15	-	10396	22	FSM	ENSG00000103994.18	ENST00000564754.7	10396	22	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_18	28.2682325326778	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTACTTTCGTTACCTT	-42482847	True	NA	-6	True	AATAAA	-18	NA	42491141	42412822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42417361_42417804_42417952_42421060_42421133_42421916_42421989_42422500_42422621_42423997_42424061_42424833_42425026_42428017_42428135_42435383_42435519_42437231_42437378_42438611_42438668_42439032_42439814_42442072_42442415_42444201_42444263_42444826_42444982_42446588_42446659_42448071_42448706_42449770_42451955_42456957_42457159_42466052_42466115_42472235_42472322_42490979
transcript_46834.known	chr15	-	1598	7	FSM	ENSG00000103978.16	ENST00000307216.10	1598	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	99.7307486296088	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTTTAGCAGTTTGGTGT	-42269552	True	NA	NA	False	AGTAAA	-26	NA	42273436	42257934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42258991_42260957_42261003_42261195_42261250_42264089_42264204_42267946_42268033_42272062_42272124_42273254
transcript_46840.known	chr15	+	2310	8	FSM	ENSG00000092531.10	ENST00000249647.8	2310	8	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_5	38.4330852367635	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGGTATTGTTCTTTCAA	42483585	True	NA	23	True	ATTAAA	-14	NA	42495633	42533058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42528261_42528421_42529674_42529820_42531412
transcript_46850.known	chr15	+	2480	7	FSM	ENSG00000092531.10	ENST00000349777.5	2480	7	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_5	289.681290386521	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGGTATTGTTCTTTCAAA	42495291	False	NA	24	True	ATTAAA	-15	NA	42495305	42533059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42529674_42529820_42531412
transcript_46859.nic	chr15	+	627	6	NIC	ENSG00000092531.10	novel	775	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	308.593843101252	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGACTATTTGTTCT	42483530	True	NA	1	True	ATTAAA	-15	NA	42495578	42545347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42545135
transcript_46860.nnic	chr15	+	554	6	NIC	ENSG00000092531.10	novel	775	6	NA	NA	-55	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_5	314.185041018824	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGACTATTTGTTCT	42483530	True	NA	1	True	ATTAAA	-15	NA	42495578	42545347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42515236_42515355_42545208
transcript_46862.known	chr15	-	7097	6	FSM	ENSG00000180979.10	ENST00000397130.8	7097	6	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_5	14.4968962195361	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATGCAGTATTTGTCTT	-42547769	True	NA	-11	True	AATAAA	-22	NA	42548793	42537828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548692
transcript_46864.nnic	chr15	+	511	5	NIC	ENSG00000092531.10	novel	775	6	NA	NA	-55	2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	342.462680448542	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGACTATTTGTTCTAG	42483530	True	NA	3	True	ATTAAA	-17	NA	42495578	42545349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_42495714_42511832_42511904_42512954_42512997_42513398_42513448_42545135
transcript_46872.known	chr15	+	368	3	FSM	ENSG00000092531.10	ENST00000563873.5	368	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	389	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTTGACTATTTGTTCT	42513395	True	NA	1	True	ATTAAA	-15	NA	42513409	42545347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42513448_42515236_42515355_42545135
transcript_46873.known	chr15	-	2407	6	FSM	ENSG00000180979.10	ENST00000563454.5	2407	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	36.0388679067476	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGCTGGAAGCAAGG	-42547748	True	NA	62	True	AATAAA	-14	NA	42548772	42542523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42544125_42545076_42545263_42547260_42547530_42548105_42548245_42548350_42548457_42548666
transcript_46874.known	chr15	-	561	4	FSM	ENSG00000180979.10	ENST00000570160.1	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	43.3769011751134	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGGAGAGCTGCAAGTC	-42547769	True	NA	NA	False	NA	NA	NA	42548793	42547307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_42547530_42548105_42548245_42548350_42548457_42548699
transcript_46877.known	chr15	+	626	7	FSM	ENSG00000137814.12	ENST00000564279.5	626	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	48.7456550770311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTGGTGACTGAGACAGA	42544365	True	NA	NA	False	NA	NA	NA	42548857	42566630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_46890.known	chr15	+	3921	6	FSM	ENSG00000137814.12	ENST00000260372.8	3921	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	14.505171491575	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAGTCCTAGTCTGAA	42544345	True	NA	70	True	AATAAA	-21	NA	42548837	42569994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_46899.known	chr15	+	2853	6	FSM	ENSG00000137814.12	ENST00000391623.8	2853	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	51.581391993625	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCTGAGTCTTGTGAATTC	42544345	True	NA	9	True	AATAAA	-19	NA	42548837	42568930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269_42561403_42563748_42563858_42566606
transcript_46907.nic	chr15	+	842	5	ISM	ENSG00000137814.12	ENST00000564279.5	626	7	-64	4943	-34	0	5prime_fragment	TRUE	canonical	3	22	junction_3	48.1890807133732	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544301	True	NA	5	True	AATAAA	-20	NA	42548793	42561687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42560781_42560871_42561269
transcript_46909.known	chr15	+	861	5	FSM	ENSG00000137814.12	ENST00000570178.1	861	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	54.8150298732017	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAAAATGTGTGTTTA	42544374	True	NA	NA	False	AATATA	-37	NA	42548866	42567096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42559338_42559409_42563748_42563858_42566606
transcript_46910.known	chr15	+	590	5	FSM	ENSG00000137814.12	ENST00000563479.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	58.4652674671039	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATCTTTATAAACATGAT	42544345	True	NA	-23	True	AAGAAA	-1	NA	42548837	42566733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42558197_42558291_42561269_42561403_42563748_42563858_42566606
transcript_46912.known	chr15	+	1702	5	FSM	ENSG00000137814.12	ENST00000568876.5	1702	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	41.8173110087198	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAATTAGCCAGGCAT	42544335	True	NA	NA	False	AATAAA	-4	NA	42548827	42567858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42559338_42559409_42561269_42561403_42563748_42563858_42566606
transcript_46917.nic	chr15	+	753	4	ISM	ENSG00000137814.12	ENST00000260372.8	3921	6	-44	8307	-34	0	5prime_fragment	FALSE	canonical	3	103	junction_2	14.7648230602334	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544301	True	NA	5	True	AATAAA	-20	NA	42548793	42561687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_42548966_42558197_42558291_42559338_42559409_42561269
transcript_46921.known	chr15	+	709	4	FSM	ENSG00000137814.12	ENST00000568846.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	6.12825877028341	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	42544341	True	NA	5	True	AATAAA	-20	NA	42548833	42561687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42548966_42559338_42559409_42560781_42560871_42561269
transcript_46930.known	chr15	+	443	2	FSM	ENSG00000137814.12	ENST00000607467.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCATTGTTGTAAAGTA	NA	False	NA	5	True	AATAAA	-20	NA	42559383	42561687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_42559409_42561269
transcript_46933.nnic	chr15	+	1253	4	NNC	ENSG00000159433.12	novel	6049	14	NA	NA	-1	-22211	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.44948974278318	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGTATATGTGGAGAAA	42575253	True	NA	NA	False	AATAAA	-17	NA	42575604	42615940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_42575763_42583345_42583416_42585520_42585638_42615032
transcript_46939.known	chr15	-	3332	29	FSM	ENSG00000159459.12	ENST00000546274.6	3332	29	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_22	5.83925840972209	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTTTTTTTTAAATTG	-43104687	True	NA	NA	False	AATAAA	-23	NA	43106113	43015655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43015870_43017094_43017182_43021274_43021376_43022701_43022802_43024828_43024984_43025380_43025430_43026560_43026664_43027775_43027829_43029943_43030069_43032567_43032632_43036177_43036280_43036527_43036594_43037772_43037884_43038170_43038233_43043214_43043396_43047160_43047290_43048391_43048492_43054741_43054900_43056343_43056443_43058340_43058430_43059084_43059193_43059701_43059826_43060051_43060115_43067897_43068037_43070794_43070926_43074978_43075090_43082637_43082717_43085983_43086241_43105941
transcript_46944.known	chr15	+	1634	12	FSM	ENSG00000166946.14	ENST00000566515.5	1634	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	85.5950489029255	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTCAATAAAATGCTAACT	43182391	True	NA	NA	False	AGTAAA	-32	NA	43185327	43195164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194138_43194414_43194462_43194726
transcript_46946.known	chr15	+	1831	11	FSM	ENSG00000166946.14	ENST00000565296.5	1831	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	67.3929521537675	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	43182502	True	NA	NA	False	AATAAA	-21	NA	43185438	43195195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194080_43194462_43194726
transcript_46947.known	chr15	+	3515	11	FSM	ENSG00000166946.14	ENST00000300213.9	3515	11	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	12.6130884401878	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCAGTTATTCCTT	43182466	True	NA	7	True	AATAAA	-20	NA	43185402	43197177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46952.known	chr15	+	1385	10	FSM	ENSG00000166946.14	ENST00000568507.5	1385	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	68.182398800371	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTGCCAGTGATTAAATG	43182502	True	NA	NA	False	AATAAA	-6	NA	43185438	43195180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43186153_43186234_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46953.known	chr15	+	1450	10	FSM	ENSG00000166946.14	ENST00000563065.5	1450	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	69.2164256535031	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGAGTGCCCTTCCAAAG	43182469	True	NA	NA	False	AATAAA	-21	NA	43185405	43195195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43185819_43185880_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46955.nic	chr15	+	1488	9	NIC	ENSG00000166946.14	novel	1450	10	NA	NA	-54	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	94.6414285606467	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGCCCTTCCAAAGTTT	43185257	False	NA	NA	False	AATAAA	-24	NA	43185273	43195198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_43185608_43185819_43185880_43189198_43189281_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46956.known	chr15	+	1356	9	FSM	ENSG00000166946.14	ENST00000569745.5	1356	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	75.4022546082012	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTCTCAATAAAATGCT	43182468	True	NA	NA	False	AGTAAA	-28	NA	43185404	43195160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43185608_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46964.known	chr15	-	792	1	FSM	ENSG00000205871.5	ENST00000487100.1	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2813	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTCAGACTTCAAATA	NA	False	NA	NA	False	NA	NA	NA	43116493	43115701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43115700_43116500
transcript_46965.known	chr15	+	1479	9	FSM	ENSG00000166946.14	ENST00000444658.7	1479	9	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	13.0192165662915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAAATGAGTGCCCTTCCA	43185881	True	NA	NA	False	AATAAA	-18	NA	43185939	43195192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43186234_43189198_43189281_43190054_43190152_43190324_43190399_43190965_43191043_43191394_43191676_43192742_43192804_43194414_43194462_43194726
transcript_46968.known	chr15	+	4268	13	FSM	ENSG00000168803.16	ENST00000562188.7	4268	13	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	8.31497978884428	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGCCTTATCATGAAATTC	43329452	True	NA	NA	False	NA	NA	NA	43330671	43354569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906_43349046_43350940_43351042_43351750
transcript_4697.known	chr1	+	754	10	FSM	ENSG00000171960.12	ENST00000304979.8	754	10	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	28.5064428498299	11151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647832	True	NA	18	True	AATAAA	-18	NA	42658422	42676758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_46975.known	chr15	+	3514	12	FSM	ENSG00000168803.16	ENST00000428046.7	3514	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	12.6065705025082	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTTCCCTGAGTTCTGTG	43329454	True	NA	24	True	AATAAA	-14	NA	43330673	43353898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906_43349046_43350940_43351042_43351750
transcript_4698.known	chr1	+	937	11	FSM	ENSG00000171960.12	ENST00000678038.1	937	11	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_9	178.06754336487	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTATGCGTATGTTTTTTTT	NA	False	NA	8	True	AATAAA	-8	NA	42658334	42676748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42668046_42668152_42676583
transcript_46986.nic	chr15	+	1734	11	ISM	ENSG00000168803.16	ENST00000562188.7	4268	13	-19	5157	-19	0	5prime_fragment	TRUE	canonical	3	32	junction_2	8.2951793229562	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	43329433	True	NA	3	True	ATTAAA	-16	NA	43330652	43349412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_4699.known	chr1	+	849	10	FSM	ENSG00000171960.12	ENST00000677307.1	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	139.484058118252	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTTTTCTTTTGGT	42647856	True	NA	18	True	AATAAA	-18	NA	42658446	42676758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659371_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_46992.nic	chr15	+	1656	10	ISM	ENSG00000168803.16	ENST00000428046.7	3514	12	-21	4483	-19	3	5prime_fragment	FALSE	canonical	3	9	junction_9	13.833221775543	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTCACATGTCTGTTGA	43329433	True	NA	6	True	ATTAAA	-19	NA	43330652	43349415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43330860_43331899_43332001_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43348906
transcript_46995.known	chr15	+	1559	10	FSM	ENSG00000168803.16	ENST00000389651.8	1559	10	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_1	13.7956872845945	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATTTTCACATGTCTGT	43329507	True	NA	3	True	ATTAAA	-16	NA	43330726	43349412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43330860_43333310_43333435_43334944_43335171_43335695_43335827_43336625_43336687_43340264_43340353_43342993_43343076_43345853_43345981_43347015_43347097_43348906
transcript_4700.known	chr1	+	2315	9	FSM	ENSG00000171960.12	ENST00000678803.1	2315	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	30.2241625194148	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCTGGATGACATCAAAAA	42647835	True	NA	NA	False	NA	NA	NA	42658425	42669179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658513_42658843_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350
transcript_4701.known	chr1	+	806	9	FSM	ENSG00000171960.12	ENST00000677356.1	806	9	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_2	28.5194560782635	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGTTTTTTTTTTCTTTTGG	42658639	True	NA	17	True	AATAAA	-17	NA	42658700	42676757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42658909_42659227_42659252_42659521_42659567_42660861_42660905_42664862_42664956_42665979_42666068_42666546_42666588_42667350_42667441_42676583
transcript_47019.nnic	chr15	+	464	3	NNC	ENSG00000168803.16	novel	3514	12	NA	NA	-15	1047	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	20	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGTATGTTTTTCCATTT	43329437	True	NA	NA	False	AAGAAA	-8	NA	43330656	43333430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_43330860_43331899_43332001_43333270
transcript_47020.nic	chr15	+	766	3	ISM	ENSG00000168803.16	ENST00000428046.7	3514	12	-361	20470	-359	1045	5prime_fragment	FALSE	canonical	3	32	junction_2	4	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGGTATGTTTTTCCAT	43330209	True	NA	NA	False	AAGAAA	-6	NA	43330312	43333428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43330860_43331899_43332001_43333310
transcript_47023.known	chr15	+	519	2	FSM	ENSG00000168803.16	ENST00000565555.1	519	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AGAAAAAAAAAAAAAGTTGA	43329605	False	NA	NA	False	NA	NA	NA	43330824	43332383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43330860_43331899
transcript_47025.nic	chr15	+	657	2	ISM	ENSG00000168803.16	ENST00000389651.8	1559	10	-400	15978	-345	1051	5prime_fragment	FALSE	canonical	1	10	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTTTCCATTTTAAT	43330223	True	NA	NA	False	AAAAAG	-1	NA	43330326	43333434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43330860_43333310
transcript_47028.nic	chr15	-	1080	4	ISM	ENSG00000067369.14	ENST00000413546.1	3143	16	-73	58427	-3	6362	5prime_fragment	FALSE	canonical	3	173	junction_2	5.31245915016974	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGGAGTATTATCAGAAC	-43485908	True	NA	NA	False	NA	NA	NA	43493159	43491075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_43491754_43492001_43492096_43492283_43492469_43493036
transcript_47030.nic	chr15	-	1325	3	NIC	ENSG00000067369.14	novel	3143	16	NA	NA	-3	6359	intron_retention	FALSE	canonical	3	173	junction_1	3.5	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTAGGAGTATTATCAG	-43485908	True	NA	NA	False	NA	NA	NA	43493159	43491078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_43492096_43492283_43492469_43493036
transcript_47031.known	chr15	+	6812	18	FSM	ENSG00000137822.13	ENST00000564079.6	6812	18	0	0	0	0	multi-exon	TRUE	canonical	3	63	junction_12	10.6156507818641	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTTCTTAT	43368684	True	NA	NA	False	ATTAAA	-21	NA	43371100	43409771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43371433_43376097_43376227_43376502_43376626_43377013_43377068_43377846_43377904_43380083_43380164_43383302_43383505_43385790_43385957_43386205_43386331_43395106_43395158_43395582_43395689_43397213_43397322_43398040_43398180_43400043_43400222_43401715_43401851_43403682_43403800_43404412_43404553_43405201
transcript_47039.known	chr15	+	10266	6	FSM	ENSG00000166963.13	ENST00000300231.6	10266	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.46969384566991	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTGTAGTGCTGCTTAG	43517442	True	NA	4	True	AATAAA	-15	NA	43517607	43531611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43517701_43520640_43520724_43520971_43521113_43521323_43529509_43529649_43529871_43530068
transcript_47042.known	chr15	+	1779	10	FSM	ENSG00000237289.10	ENST00000300283.10	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	68.564649135769	1310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43593003	False	NA	20	True	AGTAAA	-20	NA	43593053	43599406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43593272_43594044_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_47048.known	chr15	+	1579	9	FSM	ENSG00000237289.10	ENST00000441322.6	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_7	25.4506262201935	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43594007	False	NA	20	True	AGTAAA	-20	NA	43594026	43599406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43594368_43594971_43595171_43595373_43595470_43595855_43596078_43596206_43596293_43596407_43596532_43598192_43598328_43598826_43598953_43599156
transcript_47058.known	chr15	+	1779	10	FSM	ENSG00000223572.10	ENST00000434505.5	1779	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	67.3126114061918	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	NA	False	NA	20	True	AGTAAA	-20	NA	43692885	43699222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43693104_43693876_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_47071.known	chr15	+	1579	9	FSM	ENSG00000223572.10	ENST00000413453.7	1579	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_7	25.4432579478336	1299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTGTGTTACTTCTAA	43693828	False	NA	20	True	AGTAAA	-20	NA	43693858	43699222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43694200_43694803_43695003_43695205_43695302_43695687_43695910_43696038_43696125_43696239_43696364_43698013_43698149_43698640_43698767_43698972
transcript_47072.known	chr15	+	3680	13	FSM	ENSG00000167004.14	ENST00000300289.10	3680	13	0	0	0	0	multi-exon	TRUE	canonical	3	7426	junction_3	389.321873047654	1228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCGTTCCCAGACCTTGT	43671447	True	NA	17	True	AGTAAA	-19	NA	43746437	43773278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43746707_43753823_43753903_43756648_43756767_43761423_43761532_43763076_43763207_43765449_43765567_43765886_43766013_43766727_43766911_43768488_43768598_43769517_43769647_43770249_43770330_43770522_43770581_43771104
transcript_47075.known	chr15	-	1755	11	FSM	ENSG00000128886.12	ENST00000319359.8	1755	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	4.67011777153425	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTGCTTCTGTGTCCTT	-43776626	True	NA	-31	True	ATTAAA	-2	NA	43776966	43772619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43773227_43773303_43773349_43774181_43774354_43774475_43774519_43774595_43774774_43775305_43775382_43775524_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_47084.known	chr15	+	1931	5	FSM	ENSG00000140264.21	ENST00000381359.5	1931	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5727.25878475035	40908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCCGTGTGCCCAGGGCT	43777063	False	NA	51	True	NA	NA	NA	43777099	43794595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43777503_43785409_43785535_43791975_43792384_43792974_43793084_43793709
transcript_47085.known	chr15	-	667	5	FSM	ENSG00000128886.12	ENST00000486851.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	4.32290411644765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGCATTGTCTTCCTTT	-43776626	True	NA	NA	False	NA	NA	NA	43776966	43775491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43775611_43775721_43775924_43776038_43776152_43776508_43776545_43776769
transcript_4709.known	chr1	+	1524	7	FSM	ENSG00000065978.19	ENST00000436427.1	1524	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1439.18896913814	4714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTGTGTAAATTTGTC	42681531	True	NA	-7	True	AATAAA	-14	NA	42682986	42702349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42683366_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_47093.known	chr15	-	603	4	FSM	ENSG00000205771.7	ENST00000692045.1	925	4	36	286	12	-69	multi-exon	FALSE	canonical	3	10	junction_1	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAATGTGCCTAGGTGAAT	-43746109	True	NA	NA	False	NA	NA	NA	43746285	43736797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43737009_43744394_43744569_43745021_43745168_43746213
transcript_47100.known	chr15	+	690	3	FSM	ENSG00000140264.21	ENST00000403425.5	690	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	6382	11295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712924	True	NA	28	True	ATTAAA	-17	NA	43792367	43794046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792612_43792974_43793084_43793709
transcript_47102.known	chr15	+	586	3	FSM	ENSG00000140264.21	ENST00000402131.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6398.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTACCCCTTCCCAGTGTT	43712924	True	NA	-1	True	NA	NA	NA	43792367	43793975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792579_43792974_43793084_43793709
transcript_47104.known	chr15	-	1466	3	FSM	ENSG00000205771.7	ENST00000429276.1	1466	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGAGGAAGTGGGTAG	-43747081	True	NA	NA	False	AAAAAG	-6	NA	43747094	43743812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43744569_43745021_43745168_43746530
transcript_47108.known	chr15	+	548	2	FSM	ENSG00000140264.21	ENST00000474290.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGCCTGGCTAATGTTTT	43776989	False	NA	NA	False	NA	NA	NA	43777086	43778116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43777503_43777984
transcript_47109.known	chr15	+	506	3	FSM	ENSG00000140264.21	ENST00000339624.9	506	3	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_2	4624.5	58127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43712903	True	NA	28	True	ATTAAA	-17	NA	43792346	43794046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974_43793084_43793686
transcript_47110.known	chr15	+	2543	3	FSM	ENSG00000140264.21	ENST00000249786.9	2543	3	0	0	0	0	multi-exon	FALSE	canonical	3	9647	junction_1	1590.5	37740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTTGGTAGGATGTGTGT	43712876	True	NA	29	True	AATAAA	-36	NA	43792319	43796079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974_43793084_43793709
transcript_47111.known	chr15	-	1653	4	FSM	ENSG00000205771.7	ENST00000381680.7	1657	4	4	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	7.78888096369861	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTGCCGGGCTTGGTGGT	-43746126	True	NA	NA	False	ACTAAA	-23	NA	43746302	43735933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43737009_43744394_43744569_43745021_43745171_43746047
transcript_47112.known	chr15	+	739	2	ISM	ENSG00000167004.14	ENST00000497349.2	1996	7	7131	-98	4848	0	3prime_fragment	FALSE	canonical	3	8168	junction_1	0	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTCCACCAGATTGAG	43770185	False	NA	25	True	AATAAA	-21	NA	43770282	43771545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_43770581_43771104
transcript_47113.known	chr15	+	582	2	FSM	ENSG00000140264.21	ENST00000409614.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	12828	junction_1	0	11198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGAGCGCCTGGTTTGACT	43792791	False	NA	28	True	ATTAAA	-17	NA	43792838	43794046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43793084_43793709
transcript_47114.known	chr15	+	1030	2	FSM	ENSG00000140264.21	ENST00000486144.1	1030	2	0	0	0	0	multi-exon	FALSE	canonical	3	9647	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCACTCCCGGGGGT	43712886	True	NA	-26	True	NA	NA	NA	43792329	43793950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974
transcript_47115.known	chr15	+	807	3	FSM	ENSG00000140264.21	ENST00000409291.5	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	4800.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTAGACGTCATTCAG	43712903	True	NA	NA	False	NA	NA	NA	43792346	43800279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43792384_43792974_43793084_43799618
transcript_47116.known	chr15	-	2043	9	FSM	ENSG00000140259.7	ENST00000267812.4	2043	9	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_2	15.3622914957372	861	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGGTGTTTCACATTTTGA	-43820248	True	NA	-1	True	ATTAAA	-25	NA	43824690	43804491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43805277_43805375_43805466_43809754_43809915_43812986_43813148_43813248_43813358_43814500_43814689_43814944_43815075_43817228_43817449_43824490
transcript_47117.known	chr15	+	3932	13	FSM	ENSG00000092470.12	ENST00000263795.11	3932	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	16.0147501454822	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTCCTCACTTTTGTGG	43825426	True	NA	4	True	AATAAA	-16	NA	43827001	43868412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43827093_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_47123.known	chr15	+	2586	13	FSM	ENSG00000092470.12	ENST00000381246.6	2586	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	30.9528090629734	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTTGATTCTATAGTA	43825404	True	NA	23	True	ATTAAA	-20	NA	43826979	43867018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_43827119_43827964_43828367_43835060_43835151_43836160_43836217_43839604_43839729_43842414_43842517_43842627_43842672_43843900_43844055_43851086_43851246_43856945_43857164_43858670_43858824_43861332_43861387_43866127
transcript_47124.known	chr15	-	396	1	FSM	ENSG00000227973.1	ENST00000451079.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	271	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATCATATGAAAGACTGAAA	-43876229	False	NA	NA	False	AAGAAA	-5	NA	43876244	43875848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_43875800_43876200
transcript_47126.known	chr15	+	3974	10	FSM	ENSG00000166734.20	ENST00000299957.11	3974	10	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_8	24.9077309630644	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCACTGTTTTGCTGATTCT	NA	False	NA	10	True	AATAAA	-18	NA	44288718	44415758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44402886_44403055_44413335
transcript_47127.known	chr15	+	3764	9	FSM	ENSG00000166734.20	ENST00000345795.6	3764	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	36.8169033868955	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTGTTTTGCTGATTC	44287831	False	NA	9	True	AATAAA	-17	NA	44288759	44415757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44289357_44322964_44323020_44328684_44328788_44331987_44332079_44337762_44337908_44338236_44338318_44379689_44379789_44380805_44380977_44413335
transcript_47128.known	chr15	+	1918	2	FSM	ENSG00000166734.20	ENST00000429162.2	1918	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGTTTGAGTCCCTGGTT	44287809	True	NA	NA	False	TATAAA	-16	NA	44288737	44308536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44289357_44307237
transcript_47130.known	chr15	+	6433	13	FSM	ENSG00000137770.14	ENST00000260327.9	6433	13	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_1	28.7793328623163	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTCTTTGATGATATTTT	44420799	True	NA	15	True	AATAAA	-16	NA	44427628	44529038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550_44486701_44490783_44491000_44496379_44496459_44497026_44497139_44499726_44499814_44514597_44514661_44514764_44514845_44519168_44519296_44521310_44521407_44524108
transcript_47143.nic	chr15	+	544	4	ISM	ENSG00000137770.14	ENST00000260327.9	6433	13	-23	42460	-16	0	5prime_fragment	FALSE	canonical	3	287	junction_1	44.7238440009602	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATGTAAAACAAAATGGAA	44420776	True	NA	NA	False	NA	NA	NA	44427605	44486578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_44427773_44458990_44459201_44484223_44484363_44486550
transcript_47147.known	chr15	+	571	4	FSM	ENSG00000137770.14	ENST00000560834.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	134.586609867236	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCAAGTAAATGGAGGTTTG	44420812	True	NA	NA	False	NA	NA	NA	44427641	44484347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44427773_44458990_44459201_44470468_44470575_44484223
transcript_47151.known	chr15	-	1408	3	FSM	ENSG00000179523.6	ENST00000560049.2	1408	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11.5	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTATTGATTCTGTTTC	-44536900	False	NA	-5	True	AATAAA	-19	NA	44536922	44534504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44536042_44536359_44536800
transcript_47152.known	chr15	-	1288	3	FSM	ENSG00000179523.6	ENST00000653319.1	1288	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	32	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATCTCTTTCTGCATATA	-44537024	False	NA	-27	True	NA	NA	NA	44537046	44534526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44536042_44536359_44537022
transcript_47162.known	chr15	-	500	2	FSM	ENSG00000179523.6	ENST00000559356.1	500	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAGAAGTCAGGAAAAGG	-44536310	True	NA	NA	False	NA	NA	NA	44536894	44535068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44536800
transcript_47163.known	chr15	-	570	2	FSM	ENSG00000179523.6	ENST00000558323.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTGGATTGGAAGGAGGCA	-44535921	False	NA	NA	False	NA	NA	NA	44535943	44535088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44535475_44535759
transcript_47167.nic	chr15	-	1791	8	ISM	ENSG00000104133.16	ENST00000682648.1	1762	9	-76	2015	0	0	5prime_fragment	FALSE	canonical	3	43	junction_5	7.74333156163866	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGATCTTCTTAATAAC	-44661264	True	NA	NA	False	AATAAA	-22	NA	44663668	44633469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
transcript_47171.known	chr15	-	7772	40	FSM	ENSG00000104133.16	ENST00000261866.12	7772	40	0	0	0	0	multi-exon	TRUE	canonical	2	43	junction_37	16.3721914294482	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTATGTCATTATTACTGC	-44661258	True	NA	-1	True	AATAAA	-17	NA	44663662	44562695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_44563302_44564546_44564699_44565853_44566010_44566216_44566306_44567423_44567593_44569397_44569506_44570524_44570659_44572682_44572821_44573546_44573746_44574901_44575042_44583813_44584559_44585635_44585851_44589251_44589415_44592330_44592439_44595258_44595460_44596082_44596356_44596783_44596944_44598264_44598374_44598630_44598837_44600466_44600633_44606024_44606092_44608443_44608606_44610839_44610986_44613429_44613537_44615362_44615567_44620189_44620404_44621758_44621935_44622219_44622348_44622727_44622800_44626330_44626508_44628668_44628845_44629232_44629389_44633504_44633638_44648865_44649012_44651490_44651940_44652128_44652267_44657094_44657297_44659078_44659304_44660431_44660617_44663390
transcript_47174.known	chr15	+	2479	8	FSM	ENSG00000104131.13	ENST00000261868.10	2479	8	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_6	63.5783302834594	1812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCAGGTACAGGTATTCT	44525290	True	NA	5	True	ATTAAA	-18	NA	44537146	44562803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44537238_44537323_44537428_44550875_44550931_44551430_44551523_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_47175.known	chr15	+	1550	6	FSM	ENSG00000104131.13	ENST00000424492.7	1550	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	225.442320782944	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGTAAATTGTTATGTT	44525268	True	NA	-63	True	TATAAA	-33	NA	44537124	44561999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44537238_44537323_44537428_44554552_44554668_44557488_44557651_44560248_44560323_44561017
transcript_47177.known	chr15	+	499	4	FSM	ENSG00000166710.22	ENST00000559907.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1400.08245788914	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGGTTATAATAATGTTA	44694383	False	NA	-18	True	NA	NA	NA	44711926	44717704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44712021_44715422_44715702_44716328_44716357_44717606
transcript_47178.known	chr15	+	2329	1	FSM	ENSG00000166710.22	ENST00000623550.1	2329	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	214	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTATCTCTTATATCTC	44715785	False	NA	33	True	AATAAA	-14	NA	44715816	44718145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44715800_44718100
transcript_47180.known	chr15	+	3190	2	FSM	ENSG00000185880.13	ENST00000560141.2	3190	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTATGGATGTTGTGAG	NA	False	NA	1	True	AATAAA	-12	NA	44729000	44734000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_44729553_44731362
transcript_47186.known	chr15	-	595	2	FSM	ENSG00000259539.1	ENST00000558039.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTCACACCCTGGCCCAG	-45167462	True	NA	NA	False	NA	NA	NA	45167526	45152663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45153218_45167485
transcript_47187.known	chr15	-	577	4	FSM	ENSG00000138606.20	ENST00000561091.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	70.0015872835911	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCCCTCAAGTCTGAGT	-45185845	False	NA	-29	True	AATAAA	-3	NA	45187459	45174222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45174445_45175218_45175426_45178164_45178307_45187453
transcript_47188.known	chr15	-	2348	9	FSM	ENSG00000171766.17	ENST00000396659.8	2348	9	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	5.39531046372681	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCATTGGTCTAGTCAT	-45377839	True	NA	-4	True	AATAAA	-21	NA	45378544	45361123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_45362222_45363899_45364017_45364796_45364861_45366045_45366211_45366370_45366509_45368069_45368261_45369325_45369522_45376600_45376820_45378384
transcript_47191.known	chr15	+	649	5	FSM	ENSG00000166920.13	ENST00000396650.7	649	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTAGGTATATATTTAAAT	NA	False	NA	NA	False	AATAAA	-27	NA	45430609	45433340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45430656_45430769_45430833_45431000_45431087_45432071_45432133_45432947
transcript_47193.known	chr15	+	1701	10	FSM	ENSG00000137767.14	ENST00000260324.12	1701	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.496903994999953	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTGTTCTATGAGAAAATT	45635009	True	NA	28	True	AATAAA	-44	NA	45635028	45691281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45635109_45658906_45659158_45661954_45662126_45669927_45669982_45673606_45673802_45676100_45676311_45682477_45682662_45688336_45688405_45689038_45689218_45690972
transcript_47196.known	chr15	+	1839	5	FSM	ENSG00000104164.12	ENST00000567523.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	45.088801270382	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAAAAAAAATT	45583499	True	NA	NA	False	NA	NA	NA	45587378	45607773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45592134_45592277_45603103_45603188_45605427_45605515_45606394
transcript_47200.known	chr15	+	3838	5	FSM	ENSG00000104164.12	ENST00000565323.6	3838	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	46.1214429522755	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTGATGTCATTTATCA	45583710	False	NA	7	True	AATAAA	-15	NA	45587589	45609708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587797_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_47203.known	chr15	+	616	5	FSM	ENSG00000104164.12	ENST00000565409.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	45.2789962344573	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTATGTCATATGTTGA	45587521	True	NA	NA	False	NA	NA	NA	45587784	45606601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587877_45592134_45592277_45603099_45603188_45605427_45605515_45606394
transcript_47207.known	chr15	+	592	4	FSM	ENSG00000104164.12	ENST00000568597.5	592	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	52.3152835115025	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCATATGTTGAAATCCT	45583496	True	NA	NA	False	NA	NA	NA	45587375	45606607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45592134_45592277_45605427_45605515_45606394
transcript_47210.known	chr15	+	480	4	FSM	ENSG00000104164.12	ENST00000568963.5	480	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	56.1921307262463	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTCTTCTCCTGTCCCA	45583472	True	NA	NA	False	NA	NA	NA	45587351	45606529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45603103_45603188_45605427_45605515_45606394
transcript_47216.known	chr15	+	1051	3	FSM	ENSG00000104164.12	ENST00000567740.5	1051	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	62.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGTGATACTCTTTATTA	45587202	False	NA	NA	False	NA	NA	NA	45587213	45607046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_45587526_45605427_45605515_45606394
transcript_47218.nic	chr15	+	1435	2	ISM	ENSG00000104164.12	ENST00000566753.5	1996	3	0	6164	0	-6164	5prime_fragment	FALSE	canonical	3	94	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAGTGGTACTGG	45583475	True	NA	NA	False	NA	NA	NA	45587354	45593398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_45587526_45592134
transcript_47229.known	chr15	+	2634	2	FSM	ENSG00000233932.6	ENST00000645050.1	2634	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTAACTCTACCATAATA	48178450	False	NA	NA	False	NA	NA	NA	48178466	48203697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48178647_48201243
transcript_47230.known	chr15	+	635	7	FSM	ENSG00000128951.14	ENST00000559416.5	635	7	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	720.40235671155	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTGCTTCAAGTGTTTT	48330931	True	NA	NA	False	AAAACA	-36	NA	48331094	48342137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48331192_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_47233.known	chr15	+	769	7	FSM	ENSG00000128951.14	ENST00000558813.5	769	7	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	713.411152297343	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTGTTTTTCCGCAATTG	48331377	False	NA	NA	False	ATTAAA	-45	NA	48331404	48342293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48331480_48332267_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_47239.known	chr15	+	1935	6	FSM	ENSG00000128951.14	ENST00000455976.6	1935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_4	124.589566176305	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAACCAGAATGAATTCTGT	48332079	False	NA	NA	False	AATAAA	-23	NA	48332102	48343369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48332407_48334416_48334509_48336045_48336091_48341288_48341364_48341514_48341586_48342021
transcript_4724.known	chr1	+	2979	8	FSM	ENSG00000065978.19	ENST00000321358.12	2979	8	0	0	0	0	multi-exon	FALSE	canonical	3	3018	junction_1	434.176631037157	5238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTTTCTGACTTGTGGTT	42538861	True	NA	NA	False	ATTAAA	-17	NA	42682417	42703805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696198_42696289_42696641_42696945_42697179_42697263_42700780_42701047_42701980
transcript_47246.known	chr15	-	1947	13	FSM	ENSG00000103995.14	ENST00000560322.5	1947	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_6	6.16891850777392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGATGAAAAAAGCATTG	NA	False	NA	NA	False	AAGAAA	-24	NA	48811146	48772514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_47247.known	chr15	-	253	2	FSM	ENSG00000103995.14	ENST00000559630.1	253	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACAAGTTTTATTTC	-48808726	True	NA	NA	False	AAAAAG	-16	NA	48811076	48805519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48805657_48810960
transcript_47248.known	chr15	-	5560	27	FSM	ENSG00000103995.14	ENST00000380950.7	5560	27	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	13.4997808441558	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTGTTATGAATTATTTT	-48808719	True	NA	-1	True	AATAAA	-18	NA	48811069	48737937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48739289_48741600_48741705_48741946_48742101_48744239_48744344_48744895_48744993_48748442_48748611_48752348_48752470_48755902_48756554_48760134_48760267_48762390_48762673_48767059_48767193_48767334_48767464_48768218_48768329_48768955_48769082_48772486_48772692_48781195_48781360_48782138_48782231_48783972_48784121_48788800_48789002_48791236_48791377_48793320_48793462_48796009_48796161_48797300_48797580_48797660_48797731_48797947_48798052_48805562_48805657_48810960
transcript_47249.nnic	chr15	+	964	2	NNC	ENSG00000255302.5	novel	584	2	NA	NA	-52	-534	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_1	0	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCTAAAAAGACTTTATGA	48878056	False	NA	14	True	AATAAA	-23	NA	48878081	48879639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_48878273_48878866
transcript_4725.known	chr1	+	776	5	FSM	ENSG00000065978.19	ENST00000332220.10	776	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	1431.7035962447	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGGTCCACGTAAACATG	42538883	True	NA	NA	False	NA	NA	NA	42682439	42697262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42682732_42683402_42683467_42693489_42693524_42696641_42696945_42697179
transcript_47250.nnic	chr15	+	1130	2	NNC	ENSG00000255302.5	novel	584	2	NA	NA	-52	-368	at_least_one_novel_splicesite	FALSE	canonical	3	72	junction_1	0	401	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTTGGCTAATAGTAT	48878056	False	NA	25	True	AATAAA	-18	NA	48878081	48879805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_48878273_48878866
transcript_47251.known	chr15	+	584	2	FSM	ENSG00000255302.5	ENST00000560490.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCCGCTATCTTTTGGG	48854689	True	NA	NA	False	NA	NA	NA	48878135	48878785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48878273_48878338
transcript_47252.known	chr15	+	2040	1	FSM	ENSG00000255302.5	ENST00000530028.3	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3205	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGACAATTCAGAGCCTTA	48854687	True	NA	7	True	AGTAAA	-20	NA	48878133	48880173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_48878100_48880200
transcript_47255.nic	chr15	-	1900	12	ISM	ENSG00000138593.9	ENST00000559471.6	7059	18	-66	24054	-65	-1145	5prime_fragment	FALSE	canonical	2	3	junction_1	2.55193979047604	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAATTGCAAAACTA	-49043673	True	NA	NA	False	AAAAAG	-7	NA	49046512	49012691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_47256.nic	chr15	-	1765	11	ISM	ENSG00000138593.9	ENST00000261847.7	6779	17	-79	23922	-65	-1145	5prime_fragment	FALSE	canonical	2	3	junction_1	2.80891438103763	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGGAAATTGCAAAACTA	-49043673	True	NA	NA	False	AAAAAG	-7	NA	49046512	49012691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_47259.known	chr15	-	7059	18	FSM	ENSG00000138593.9	ENST00000559471.6	7059	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	3.06898763782249	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCCTTTCAGAAGAGAT	-49043607	True	NA	NA	False	AATAAA	-19	NA	49046446	48988637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49019417_49019553_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_4726.known	chr1	-	2841	5	FSM	ENSG00000164007.11	ENST00000296387.6	2841	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	7.79021822544144	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-42739589	True	NA	NA	False	NA	NA	NA	42740236	42733092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42735135_42735877_42736031_42738228_42738314_42738420_42738586_42739840
transcript_47260.known	chr15	-	6779	17	FSM	ENSG00000138593.9	ENST00000261847.7	6779	17	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	3.25	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGATTTTCATCTTTTGC	-49043594	True	NA	8	True	AATAAA	-33	NA	49046433	48988769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_48992927_48996366_48996587_48999832_48999988_49000876_49001098_49009215_49009379_49011730_49011864_49012647_49012818_49016559_49016702_49016847_49017016_49017547_49017629_49027364_49027481_49028143_49028169_49028452_49028683_49032964_49033101_49035333_49035659_49037590_49037770_49046275
transcript_47261.known	chr15	-	546	2	FSM	ENSG00000138593.9	ENST00000557923.1	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTATGTCTCCTTCAGTA	-49043607	True	NA	NA	False	NA	NA	NA	49046446	49037394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49037770_49046275
transcript_4727.known	chr1	-	1586	4	FSM	ENSG00000164007.11	ENST00000372539.3	1586	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.94392028877595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTATCATTCGGTCTG	-42740123	False	NA	0	True	NA	NA	NA	42740140	42734994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42736031_42738228_42738314_42738420_42738586_42739840
transcript_47271.nic	chr15	+	2069	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	21.8451367585557	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTATTCTTGAATAGA	49155108	True	NA	2	True	ATTAAA	-37	NA	49155763	49328529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49156017_49161739_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_47272.nic	chr15	+	2035	11	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	23.6154610372104	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTATTCTTGAATAGA	49155118	True	NA	2	True	ATTAAA	-37	NA	49155773	49328529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49156017_49161763_49161862_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_47277.known	chr15	+	5299	10	FSM	ENSG00000156958.15	ENST00000327171.7	5299	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	13.1656117720877	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	49155109	True	NA	NA	False	AATAAA	-18	NA	49155764	49331882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_47279.known	chr15	+	5176	10	FSM	ENSG00000156958.15	ENST00000560031.6	5176	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	12.5766783971831	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATTGTCCTTATATTGAC	49169856	True	NA	NA	False	AATAAA	-18	NA	49170246	49331882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49281986_49282086_49283565_49283719_49292326_49292538_49319603_49319806_49327951
transcript_47287.nnic	chr15	+	1696	8	NIC	ENSG00000156958.15	novel	5299	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	25.2352199620018	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTATTCTTGAATAGA	49155107	True	NA	2	True	ATTAAA	-37	NA	49155762	49328529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49156017_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49292326_49292538_49319603_49319806_49327951
transcript_47288.nnic	chr15	+	1591	8	NIC	ENSG00000156958.15	novel	5176	10	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	24.9440189551053	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGCATTATTCTTGAATAGA	49169836	True	NA	2	True	ATTAAA	-37	NA	49170226	49328529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49170376_49201161_49201251_49217189_49217314_49235850_49235942_49239220_49239368_49292326_49292538_49319603_49319806_49327951
transcript_47293.known	chr15	-	6576	13	FSM	ENSG00000166200.15	ENST00000388901.10	6576	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	117.353780178664	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTAAGTATTTACTGTG	-49149722	True	NA	NA	False	AATAAA	-15	NA	49155599	49122726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_47294.known	chr15	-	2036	13	FSM	ENSG00000166200.15	ENST00000299259.10	2036	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	123.946533051778	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTTTGGTTCTTGATG	-49149784	True	NA	-6	True	AATAAA	-17	NA	49155661	49127349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49128095_49128701_49128761_49129476_49129560_49130718_49130817_49133758_49133812_49133929_49134109_49134339_49134515_49137149_49137228_49137347_49137459_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_47304.known	chr15	-	803	8	FSM	ENSG00000166200.15	ENST00000558843.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	127.201591570071	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGATGAATCTGGAAGTC	-49149713	True	NA	NA	False	NA	NA	NA	49155590	49134032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49134109_49134339_49134515_49137149_49137228_49137347_49137438_49139527_49139654_49144226_49144305_49144964_49145079_49155524
transcript_47320.known	chr15	-	1139	8	FSM	ENSG00000166262.16	ENST00000558594.5	1139	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.16496563917521	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGGTGTTTTTTCCTTCTTGT	-49620509	True	NA	NA	False	NA	NA	NA	49620818	49576493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49576846_49577171_49577306_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620133_49620191_49620699
transcript_47331.nnic	chr15	-	1021	7	NNC	ENSG00000166262.16	novel	3316	16	NA	NA	219	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.684198393627	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	-49396039	False	NA	-1	True	AATAAA	-23	NA	49396223	49328392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49390025_49390108_49395974
transcript_47334.nic	chr15	-	1477	7	NIC	ENSG00000166262.16	novel	1139	8	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	4.13991411612474	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620546	True	NA	-20	True	ATTAAA	-16	NA	49620855	49576135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577171_49577306_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620699
transcript_47335.nic	chr15	-	1448	7	ISM	ENSG00000166262.16	ENST00000561064.5	1596	11	74	153736	-33	0	5prime_fragment	FALSE	canonical	2	4	junction_4	3.8151743807532	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620546	True	NA	-20	True	ATTAAA	-16	NA	49620855	49576135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49576846_49577628_49577665_49588015_49588084_49589775_49590008_49611214_49611269_49615120_49615244_49620630
transcript_47337.nnic	chr15	-	1032	6	NNC	ENSG00000166262.16	novel	3316	16	NA	NA	71	0	intron_retention	FALSE	canonical	0	0	junction_3	16.4268073587049	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	-49396187	True	NA	-1	True	AATAAA	-23	NA	49396371	49328392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367554_49371301_49371400_49395974
transcript_47338.nic	chr15	-	1196	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-38	0	intron_retention	FALSE	canonical	0	0	junction_3	14.4360659460949	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396480	49328392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49328676_49331779_49331850_49335418_49335497_49367447_49367609_49371301_49371400_49395974
transcript_47343.nic	chr15	-	1216	6	NIC	ENSG00000166262.16	novel	911	8	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	3.65513337649941	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620546	True	NA	-20	True	ATTAAA	-16	NA	49620855	49576135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120_49615244_49620630
transcript_47344.nic	chr15	-	1147	6	NIC	ENSG00000166262.16	novel	3316	16	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	3.00665927567458	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGAAGCTGTTATCAGTGT	-49620546	True	NA	-20	True	ATTAAA	-16	NA	49620855	49576135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_49576846_49577628_49577665_49588015_49588084_49611214_49611269_49615120_49615244_49620699
transcript_47349.nnic	chr15	-	710	5	NNC	ENSG00000166262.16	novel	2204	5	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	14.6351460532514	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	-49396218	True	NA	-1	True	AATAAA	-23	NA	49396402	49328392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974_49396098_49396266
transcript_47354.nnic	chr15	-	789	5	NNC	ENSG00000166262.16	novel	569	2	NA	NA	-33	-309	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.41869858279434	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTTGAACTCTAT	-49620546	True	NA	NA	False	AATAAA	-15	NA	49620855	49590084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_49590478_49606155_49606219_49611214_49611269_49615120_49615244_49620699
transcript_47356.nic	chr15	-	957	4	ISM	ENSG00000166262.16	ENST00000559573.3	2204	5	-38	1431	-38	0	intron_retention	FALSE	canonical	3	13	junction_2	11.7284080571728	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTGTCCAAGCATGATCT	NA	False	NA	-1	True	AATAAA	-23	NA	49396480	49328392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974
transcript_47369.known	chr15	-	2204	5	FSM	ENSG00000166262.16	ENST00000559573.3	2204	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	15.2704780540755	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTGTCTCTTTTTTTCA	-49396258	True	NA	0	True	ATTAAA	-23	NA	49396442	49326961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_49328676_49331779_49331850_49371301_49371400_49395974_49396098_49396243
transcript_47381.known	chr15	+	1201	6	FSM	ENSG00000104047.15	ENST00000557988.5	1201	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	186.383904884515	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATATATAATGCCTGT	49617408	True	NA	22	True	AATAAA	-33	NA	49621073	49643657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49630955_49631059_49632158_49632303_49634535_49634795_49643330
transcript_47383.nic	chr15	+	1250	6	NIC	ENSG00000104047.15	novel	1201	6	NA	NA	-57	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_2	179.446259364747	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATCATATATAATGCCTGT	49617314	True	NA	22	True	AATAAA	-33	NA	49620979	49643657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535_49634795_49643330
transcript_47391.known	chr15	+	13776	6	FSM	ENSG00000104047.15	ENST00000251250.7	13776	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	186.261107051365	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	49617433	True	NA	NA	False	AATAAA	-20	NA	49621098	49656232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49623670_49623799_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_47396.known	chr15	+	794	5	FSM	ENSG00000104047.15	ENST00000559223.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	188.719865144081	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTATATTTATAGATAGCAC	49617379	True	NA	NA	False	NA	NA	NA	49621044	49634730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49631000_49631059_49632158_49632303_49634535
transcript_47397.known	chr15	+	13699	5	FSM	ENSG00000104047.15	ENST00000403028.8	13699	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	19.4470434770944	464	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTTCTTTCTTTAACC	49617382	True	NA	NA	False	AATAAA	-20	NA	49621047	49656232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_47401.known	chr15	+	1131	5	FSM	ENSG00000104047.15	ENST00000558653.5	1131	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	164.503799348222	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTAACATTAATAAACTTAT	49617399	True	NA	-25	True	NA	NA	NA	49621064	49643610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621194_49625112_49625432_49632158_49632303_49634535_49634795_49643330
transcript_47405.known	chr15	+	552	4	FSM	ENSG00000104047.15	ENST00000560632.5	552	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	193.36379070435	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAGGATTCAAAATAA	49617416	True	NA	NA	False	AATAAA	-20	NA	49621081	49634595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_49621123_49625112_49625432_49632170_49632303_49634535
transcript_47411.known	chr15	+	2384	10	FSM	ENSG00000140284.11	ENST00000267842.10	2384	10	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	7.24866952457782	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGCACTGTCTCTGTGTT	50181716	True	NA	10	True	ATTAAA	-18	NA	50182195	50236385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50182906_50197499_50197710_50202486_50202646_50205238_50205364_50222964_50223160_50225987_50226079_50226979_50227179_50228944_50229043_50233867_50233999_50235919
transcript_47416.known	chr15	-	2726	9	FSM	ENSG00000104064.18	ENST00000220429.12	2726	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_4	51.6690187636653	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATATGTTCATTGTAGAC	-50351634	True	NA	-16	True	ATTAAA	-10	NA	50355153	50277262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_47417.known	chr15	-	4609	9	FSM	ENSG00000104064.18	ENST00000380877.8	4609	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	49.7242395618073	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCTTTGTCCAAAACGTGA	-50351679	True	NA	-11	True	AATAAA	-17	NA	50355198	50275388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50278785_50286067_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_47424.known	chr15	-	1412	9	FSM	ENSG00000104064.18	ENST00000560825.5	1412	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_8	89.0118496325068	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAATGAATGAATGAGTG	-50355162	False	NA	NA	False	AATAAA	-6	NA	50355202	50285893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50286184_50289482_50289666_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50346371_50346396_50354984
transcript_47426.known	chr15	-	1392	8	FSM	ENSG00000104064.18	ENST00000429662.6	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	44.7172522977567	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351634	True	NA	NA	False	AATAAA	-20	NA	50355153	50285879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301220_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_47429.known	chr15	-	1401	8	FSM	ENSG00000104064.18	ENST00000396464.7	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_3	41.7284711692443	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTGAGTGAAGAATTTGT	-50351679	True	NA	NA	False	AATAAA	-20	NA	50355198	50285879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50286184_50289482_50289669_50300788_50300903_50301256_50301369_50302928_50303124_50303965_50304134_50309690_50309799_50354984
transcript_47442.nic	chr15	+	1254	3	NIC	ENSG00000244879.9	novel	2277	3	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353290	True	NA	7	True	ATTAAA	-19	NA	50355463	50371343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_50355546_50356099_50356258_50370329
transcript_47443.nnic	chr15	+	1302	3	NNC	ENSG00000244879.9	novel	1098	2	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	6.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353290	True	NA	7	True	ATTAAA	-19	NA	50355463	50371343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_50355546_50356099_50356308_50370331
transcript_47444.known	chr15	+	2277	3	FSM	ENSG00000244879.9	ENST00000648591.1	2277	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	32	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTCATCTCACTTTCAG	50353302	True	NA	NA	False	AATATA	-3	NA	50355475	50372158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355766_50356099_50356258_50370329
transcript_47446.nnic	chr15	+	1552	3	NNC	ENSG00000244879.9	novel	2277	3	NA	NA	-26	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_2	29.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50355399	False	NA	7	True	ATTAAA	-19	NA	50355433	50371343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_50355766_50356099_50356308_50370331
transcript_47452.known	chr15	+	16182	2	FSM	ENSG00000244879.9	ENST00000499624.3	16182	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACGCACTTGTCTTTGTCCT	50353293	True	NA	NA	False	CATAAA	-17	NA	50355466	50372202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355546_50356099
transcript_47454.known	chr15	+	554	2	FSM	ENSG00000244879.9	ENST00000561289.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAGAAATTTGCCAAAT	50355530	False	NA	54	True	NA	NA	NA	50355544	50356414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355784_50356099
transcript_47455.known	chr15	+	1098	2	FSM	ENSG00000244879.9	ENST00000668321.1	1098	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGACTCCACTTATGCA	50353286	True	NA	7	True	ATTAAA	-19	NA	50355459	50371343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355546_50370331
transcript_47456.known	chr15	+	1076	1	FSM	ENSG00000244879.9	ENST00000619314.1	1076	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	141	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTATGAACTTAATCTAG	50354071	True	NA	NA	False	AAGAAA	-43	NA	50354958	50356034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50355000_50356000
transcript_47458.known	chr15	+	18865	20	FSM	ENSG00000138592.14	ENST00000307179.9	18865	20	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	54.2516961706832	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTGTCTCATACCTGT	50418268	True	NA	NA	False	AATAAA	-17	NA	50424404	50514421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_47459.known	chr15	+	19026	20	FSM	ENSG00000138592.14	ENST00000396444.7	19026	20	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	60.6823617740024	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGCAGTGTCTCATACCT	50418245	True	NA	NA	False	AATAAA	-15	NA	50424381	50514419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424655_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480_50482066_50484274_50484362_50489800_50489882_50490262_50490526_50492700_50492914_50494069_50494281_50495847_50496085_50497088_50497232_50498595_50498729_50498902
transcript_4746.known	chr1	-	536	5	FSM	ENSG00000228192.9	ENST00000425076.1	536	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.61248608016091	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	-42846052	True	NA	NA	False	AATAAA	-18	NA	42846387	42841897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844611_42846256
transcript_47462.known	chr15	+	1917	12	FSM	ENSG00000138592.14	ENST00000559329.5	1917	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.4314989938613	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTCGGGAAAGGCAGCA	50418268	True	NA	-15	True	AAGAAA	-3	NA	50424404	50481702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424655_50432337_50432500_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_47467.nic	chr15	+	1743	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-50	32641	-25	75	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAGCTGAAGAAAATGA	NA	False	NA	63	True	AAAAAG	-12	NA	50424354	50481780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_47468.nic	chr15	+	1798	11	ISM	ENSG00000138592.14	ENST00000307179.9	18865	20	-50	32586	-25	130	5prime_fragment	FALSE	canonical	3	121	junction_1	47.6849032713709	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAGAAGAAAGAAAGTGAA	NA	False	NA	118	True	AAAAAG	-13	NA	50424354	50481835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_50424515_50439008_50439178_50441348_50441494_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_4747.known	chr1	-	610	5	FSM	ENSG00000228192.9	ENST00000444563.6	646	5	33	3	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.61248608016091	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAGTCTCGGGTATTC	-42846052	True	NA	NA	False	AATAAA	-18	NA	42846387	42841897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42842014_42842774_42842917_42843403_42843451_42844510_42844685_42846256
transcript_47473.known	chr15	+	1568	10	FSM	ENSG00000138592.14	ENST00000625664.2	1568	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	88.9058317186238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAACAAACAAGAAAAA	50418290	True	NA	-35	True	AAGAAA	-37	NA	50424426	50481682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_50424655_50439008_50439178_50449399_50449486_50458999_50459163_50462279_50462323_50465046_50465192_50471632_50471796_50476848_50476994_50477275_50477500_50481480
transcript_47481.known	chr15	-	10382	39	FSM	ENSG00000092439.16	ENST00000646667.1	10382	39	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_11	14.2043115065096	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAGATCAAGTAATTATTT	-50681718	True	NA	NA	False	AATAAA	-21	NA	50686797	50557157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50561809_50569886_50569994_50570103_50570156_50574273_50574480_50574636_50574720_50574851_50575136_50575723_50575790_50575868_50575920_50578638_50578665_50580873_50580909_50583088_50583160_50586391_50586489_50589591_50589657_50591910_50592627_50593616_50593750_50594428_50594614_50596254_50596382_50599121_50599297_50604865_50605145_50607199_50607329_50609580_50609725_50609805_50609962_50611092_50611322_50612548_50612830_50613706_50613842_50614122_50614264_50619744_50619799_50624165_50624301_50628148_50628250_50631416_50631490_50632868_50632993_50634381_50634557_50637421_50637594_50639423_50639549_50643339_50643554_50648686_50648886_50657780_50657820_50662966_50663047_50686530
transcript_47486.known	chr15	-	7270	15	FSM	ENSG00000138600.10	ENST00000261854.10	7270	15	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	18.3871350322414	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTGTTTTATTTTG	-50761550	True	NA	-14	True	AATAAA	-19	NA	50765706	50702265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50707875_50719939_50720101_50722123_50722202_50725220_50725324_50726320_50726378_50730964_50731040_50732602_50732685_50736100_50736203_50736643_50736741_50739679_50739829_50747494_50747629_50748112_50748203_50748687_50748871_50749635_50749747_50765467
transcript_47488.nnic	chr15	-	452	4	NNC	ENSG00000273674.6	novel	479	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.88561808316413	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAATCTGTGGTATTTTGT	-50908533	True	NA	NA	False	AATAAA	-19	NA	50908617	50839874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_50840006_50860854_50860955_50874571_50874727_50908551
transcript_47489.known	chr15	-	953	3	FSM	ENSG00000273674.6	ENST00000655436.2	980	3	27	0	25	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTTGGTACGTCCCTG	-50908488	True	NA	NA	False	AAAAAG	-44	NA	50908572	50881794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50882505_50890855_50891078_50908551
transcript_47490.nnic	chr15	-	348	3	NIC	ENSG00000273674.6	novel	2398	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATCCAATCTGTGGTATT	-50908533	True	NA	NA	False	AATAAA	-15	NA	50908617	50839878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_50840006_50874571_50874727_50908551
transcript_47491.nnic	chr15	-	343	3	NIC	ENSG00000273674.6	novel	2398	5	NA	NA	-14	-12540	combination_of_known_splicesites	FALSE	non_canonical	0	0	junction_1	2	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTATGGTATATTTG	-50908533	True	NA	NA	False	AATAAA	-19	NA	50908617	50852418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_50852541_50874571_50874727_50908551
transcript_47492.nnic	chr15	-	560	2	FSM	ENSG00000273674.6	ENST00000693106.1	549	2	-11	0	-5	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAGTGAGGAGAAGGTACTT	-50908524	True	NA	NA	False	AATAAA	-23	NA	50908608	50882001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_50882505_50908551
transcript_47496.nic	chr15	-	975	6	ISM	ENSG00000104093.14	ENST00000449909.7	7465	41	-267	114518	-69	3713	5prime_fragment	FALSE	canonical	2	10	junction_5	0.979795897113271	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTTATTTATTTTTAT	-51622824	False	NA	NA	False	AATAAA	-20	NA	51622902	51563329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
transcript_47497.known	chr15	-	10672	43	FSM	ENSG00000104093.14	ENST00000251076.9	10672	43	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	7.09108219611211	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCAGTCTATTCATTCA	-51622755	False	NA	68	True	GATAAA	-31	NA	51622833	51447710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51449194_51450128_51450347_51451644_51451698_51453549_51453642_51455150_51455229_51456065_51456194_51456308_51456370_51457327_51457467_51458505_51458628_51458708_51458796_51463378_51463497_51464674_51464877_51465565_51465652_51466183_51466312_51471222_51471402_51474343_51474593_51476588_51476717_51478270_51478348_51479947_51480140_51480541_51481624_51486072_51486338_51487953_51488120_51488547_51488646_51491577_51491748_51495023_51495135_51498551_51500232_51502805_51503034_51507133_51507254_51514441_51514560_51517077_51517168_51535662_51535785_51536165_51536863_51537487_51537760_51538212_51538453_51542332_51542508_51545582_51545767_51547229_51547409_51563380_51563448_51564124_51564261_51565087_51565167_51568486_51568559_51576055_51576182_51622458
transcript_47500.known	chr15	+	3160	12	FSM	ENSG00000104112.9	ENST00000220478.8	3160	12	0	0	0	0	multi-exon	FALSE	canonical	3	524	junction_5	37.2323506360302	809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGGTCCGTGCCATC	51681444	True	NA	20	True	AATAAA	-16	NA	51681502	51721026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_47508.known	chr15	+	2163	11	FSM	ENSG00000104112.9	ENST00000542355.6	2163	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	172.053015085467	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAAAGGATCCAGGTAAA	51681468	False	NA	NA	False	NA	NA	NA	51681491	51720071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51681838_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158_51692337_51695874_51695992_51699318_51699403_51701106_51701245_51713332_51713414_51719407
transcript_47514.nic	chr15	+	1126	7	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	-5	28690	-5	0	5prime_fragment	FALSE	canonical	3	524	junction_5	41.5548499643009	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAACCACTGTGTGGTTGTG	51681474	False	NA	7	True	NA	NA	NA	51681497	51692336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218_51683435_51688259_51688403_51689218_51689369_51692158
transcript_47519.nic	chr15	+	526	4	ISM	ENSG00000104112.9	ENST00000220478.8	3160	12	-14	37730	-3	-9040	5prime_fragment	TRUE	canonical	3	603	junction_3	19.6185852927495	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGAAAGAAAGACAATCT	51681465	True	NA	NA	False	NA	NA	NA	51681488	51683296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51681838_51682516_51682570_51683078_51683125_51683218
transcript_47521.known	chr15	-	775	3	FSM	ENSG00000140280.14	ENST00000558126.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGTTGCTGTTTAAGTGA	-51751363	True	NA	NA	False	NA	NA	NA	51751437	51723243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51723650_51724789_51724992_51751270
transcript_47522.known	chr15	-	1277	3	FSM	ENSG00000140280.14	ENST00000267838.7	1277	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTAAATGCTGACAGCTT	-51737381	True	NA	47	True	AATAAA	-19	NA	51737655	51723010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51723650_51724789_51725122_51737349
transcript_47523.known	chr15	-	1026	3	FSM	ENSG00000140280.14	ENST00000560491.2	1026	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTTAAGTGATGCTGA	-51738098	False	NA	NA	False	NA	NA	NA	51738121	51723237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51723650_51724789_51725122_51737839
transcript_47524.known	chr15	-	1228	3	FSM	ENSG00000140280.14	ENST00000454181.6	1228	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGAGTCTCCTTTTTTTTT	NA	False	NA	-11	True	AATAAA	-41	NA	51751585	51723068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51723650_51724789_51725122_51751270
transcript_47525.known	chr15	+	9150	10	FSM	ENSG00000128872.10	ENST00000249700.9	9150	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_7	2.00616334280753	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGACTGGTTTTATATG	51751006	True	NA	NA	False	AATAAA	-20	NA	51751596	51816363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51751713_51766372_51766568_51768261_51768419_51773711_51773835_51776931_51777019_51781043_51781175_51782720_51782829_51798196_51798341_51806376_51806522_51808419
transcript_47532.known	chr15	+	8232	10	FSM	ENSG00000138594.14	ENST00000308580.12	8232	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_7	31.3538152127466	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTTTTTGAAAAAGC	51818758	True	NA	30	True	AATAAA	-22	NA	51829652	51915725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_51829837_51862810_51863011_51869216_51869374_51887588_51887712_51889055_51889146_51893814_51893946_51896418_51896527_51900154_51900299_51901891_51902037_51908775
transcript_47538.nic	chr15	+	563	3	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-23	46353	2	6389	5prime_fragment	FALSE	canonical	3	379	junction_2	1.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAAGCCCCAGAATTTTAA	NA	False	NA	NA	False	CATAAA	-40	NA	51829629	51869372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51829837_51862810_51863011_51869216
transcript_47539.nic	chr15	+	1676	2	ISM	ENSG00000138594.14	ENST00000308580.12	8232	10	-23	51446	2	1296	5prime_fragment	FALSE	canonical	3	382	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACTGGAAAAAGCATAAG	NA	False	NA	NA	False	NA	NA	NA	51829629	51864279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_51829837_51862810
transcript_47540.nnic	chr15	-	1252	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5587	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.86490620843508	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	-51936030	True	NA	NA	False	AATAAA	-17	NA	51936214	51918962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_51919144_51922715_51922909_51924039_51924179_51925744_51925882_51926777_51926871_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_47542.nnic	chr15	-	1243	9	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5587	110	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	3.82222121285516	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCCACGATGTTAGAAAATT	-51936030	True	NA	NA	False	AATAAA	-17	NA	51936214	51918962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_51919144_51922724_51922909_51924039_51924179_51925744_51925882_51926777_51926871_51928206_51928294_51929332_51929479_51930528_51930624_51936033
transcript_47543.nnic	chr15	-	462	3	NNC	ENSG00000259556.2	novel	1041	9	NA	NA	-5587	-10220	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.5	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCGTAGAATAAATATTTTT	-51936030	True	NA	NA	False	ATTAAA	-23	NA	51936214	51929292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_51929479_51930528_51930624_51936033
transcript_47546.known	chr15	+	5299	6	FSM	ENSG00000069956.14	ENST00000680066.1	5299	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	236.512663508743	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATGTGCCAATTACTTT	52011432	True	NA	-10	True	AATAAA	-3	NA	52019228	52067359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52019372_52045829_52047016_52049992_52050138_52058632_52058798_52061298_52061501_52063901
transcript_47552.known	chr15	+	514	3	FSM	ENSG00000069956.14	ENST00000558100.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	1.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGCACGGTAATCTGAGT	52011441	True	NA	NA	False	NA	NA	NA	52019237	52046124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52019377_52042753_52042834_52045829
transcript_47553.nic	chr15	+	327	2	ISM	ENSG00000069956.14	ENST00000261845.7	5330	6	-17	21394	-7	-72	5prime_fragment	FALSE	canonical	3	491	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACGGAAATAGTGCTTACC	52011405	True	NA	NA	False	AATAAA	-30	NA	52019201	52045981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_52019377_52045829
transcript_47554.known	chr15	-	2165	12	FSM	ENSG00000166477.13	ENST00000299601.10	2165	12	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_8	43.9830921684028	1366	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTCTATGTTTAAGAAATC	-51964690	True	NA	-2	True	AATAAA	-16	NA	51971778	51938024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_51938261_51947291_51947390_51949807_51949995_51951843_51951980_51953128_51953264_51954480_51954576_51958741_51958827_51959898_51960045_51960638_51960734_51962388_51962494_51965748_51966505_51971687
transcript_47555.known	chr15	+	453	1	FSM	ENSG00000242327.1	ENST00000486386.1	453	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTTGTCTATGTACTCA	NA	False	NA	NA	False	NA	NA	NA	52095294	52095747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52095300_52095700
transcript_47556.known	chr15	-	1249	2	FSM	ENSG00000137875.4	ENST00000260442.3	1249	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTTGTCTTTCCTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	52112775	52109262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52109974_52112237
transcript_47559.known	chr15	-	1735	11	FSM	ENSG00000069966.19	ENST00000358784.11	1735	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_6	17.9454729667401	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGTTCTATTGTCTTTT	NA	False	NA	-6	True	NA	NA	NA	52180001	52122205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52122769_52124472_52124640_52125947_52126045_52128195_52128245_52133377_52133470_52135612_52135757_52141139_52141273_52147458_52147536_52149883_52149926_52153939_52154077_52179767
transcript_47570.nic	chr15	-	1187	4	ISM	ENSG00000069966.19	ENST00000560075.1	817	6	11351	-423	-10	423	3prime_fragment	FALSE	canonical	3	227	junction_1	13.0213499897497	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATCTAATTAGCTGG	-52175478	True	NA	NA	False	NA	NA	NA	52179983	52146743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_52147536_52149883_52149926_52153939_52154077_52179767
transcript_47572.nnic	chr15	-	884	4	NNC	ENSG00000069966.19	novel	918	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	119.035942284486	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-52175478	True	NA	NA	False	AATAAA	-18	NA	52179983	52149277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_52149767_52149883_52149926_52153939_52154077_52179767
transcript_47573.known	chr15	+	2554	3	FSM	ENSG00000259577.2	ENST00000654724.1	2554	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGTCAGGAGTTCAAGAC	52179899	True	NA	NA	False	NA	NA	NA	52180027	52206915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_52180402_52181049_52181203_52204888
transcript_47575.nnic	chr15	-	1026	3	NNC	ENSG00000069966.19	novel	918	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	127	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-52175478	True	NA	NA	False	AATAAA	-18	NA	52179983	52149277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_52149926_52153914_52154077_52179767
transcript_47576.known	chr15	-	918	3	FSM	ENSG00000069966.19	ENST00000560116.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	1.5	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAATTCCTATATTTATT	-52175395	True	NA	NA	False	AATAAA	-18	NA	52179900	52149277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52149926_52153939_52154077_52179767
transcript_47581.known	chr15	-	718	4	FSM	ENSG00000128989.11	ENST00000564163.5	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	702.431174959907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTAGAGCAACATAAGTAAA	-52546084	True	NA	NA	False	NA	NA	NA	52569015	52551734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52564189_52564247_52568847
transcript_47582.known	chr15	-	745	4	FSM	ENSG00000128989.11	ENST00000567669.5	745	4	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_3	714.238211118827	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATGTTACTCTTATTTAA	-52569144	False	NA	NA	False	TTTAAA	-45	NA	52569167	52551593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52568847_52568903_52569111
transcript_47583.known	chr15	-	275	3	FSM	ENSG00000128989.11	ENST00000567830.1	275	3	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_2	762	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGACCACATTCCCACTCC	-52569144	False	NA	NA	False	NA	NA	NA	52569167	52552008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52569111
transcript_47584.known	chr15	-	5366	3	FSM	ENSG00000128989.11	ENST00000249822.9	5366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1543	junction_1	60.5	594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTTTCATCTTATTTGT	-52546099	True	NA	-8	True	ATTAAA	-17	NA	52569030	52547044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52552105_52557099_52557223_52568847
transcript_47586.nnic	chr15	+	700	3	Antisense	novelGene_ENSG00000169856.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCATGGCCTGCTTTCTGTT	52745985	False	NA	NA	False	CATAAA	-16	NA	52746036	52757937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_52746193_52757273_52757400_52757519
transcript_47592.known	chr15	-	959	3	FSM	ENSG00000259203.3	ENST00000654059.2	1337	3	376	2	279	-2	multi-exon	FALSE	canonical	3	56	junction_1	29	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTTTTTCCAGAATCCA	-52804601	False	NA	-12	True	AATAAA	-16	NA	52804613	52800167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52800918_52804208_52804298_52804493
transcript_47593.known	chr15	-	2130	3	FSM	ENSG00000259203.3	ENST00000660503.2	2211	3	0	81	0	-77	multi-exon	TRUE	canonical	2	7	junction_1	53.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTCTGTCATCAGTCAGAG	-52805239	False	NA	-78	True	NA	NA	NA	52805251	52802564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_52803848_52804208_52804298_52804493
transcript_47594.nnic	chr15	-	782	3	NNC	ENSG00000259203.3	novel	2211	3	NA	NA	11	78	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	51.5	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCAAAGGAATTAAATCTAT	-52804966	False	NA	NA	False	ATTAAA	-18	NA	52804978	52803127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_52803336_52804208_52804298_52804493
transcript_47600.nnic	chr15	-	749	3	NNC	ENSG00000166415.15	novel	4333	3	NA	NA	210	150	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	60.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGTACACAATACTTACT	-53540099	False	771	-6	True	AATAAA	-16	NA	53540870	53517319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_53517755_53523217_53523323_53540661
transcript_47601.known	chr15	-	4333	3	FSM	ENSG00000166415.15	ENST00000567224.1	4333	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	41	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTGTTTGTTT	-53540332	True	NA	NA	False	ATTAAA	-16	NA	53541103	53513740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_53517755_53523217_53523323_53540889
transcript_47602.known	chr15	-	4224	3	FSM	ENSG00000166415.15	ENST00000614174.4	4224	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	26.5	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTACTGTTTTTTGTTTGTT	-53540309	True	NA	NA	False	ATTAAA	-15	NA	53541080	53513741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_53517755_53523217_53523323_53540974
transcript_47608.known	chr15	-	1778	6	FSM	ENSG00000137876.11	ENST00000569386.2	1778	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	807.081309410644	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTTAAATACATTAAGTAAC	-55196692	False	NA	38	True	NA	NA	NA	55196709	55181141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55182226_55183314_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196352
transcript_47611.known	chr15	-	1395	6	FSM	ENSG00000137876.11	ENST00000677730.1	1395	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	795.440657748898	7062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATATTTATTCTTTA	-55179700	True	NA	-1	True	AATAAA	-16	NA	55196958	55181314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55182220_55183310_55183401_55185361_55185426_55190974_55191048_55192719_55192834_55196809
transcript_47615.nic	chr15	-	1222	8	NIC	ENSG00000069974.16	novel	3447	7	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	19.7732038839621	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCAGCTTTGTAAAT	-55289305	True	NA	0	True	AATAAA	-21	NA	55289868	55205348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55259920_55260024_55270164_55270285_55289715
transcript_47617.known	chr15	-	3447	7	FSM	ENSG00000069974.16	ENST00000336787.6	3447	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	9.38083151964686	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTGTGAACGTAACTG	-55289250	True	NA	3	True	AATAAA	-22	NA	55289813	55202965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55289715
transcript_47618.nnic	chr15	-	1060	7	NNC	ENSG00000069974.16	novel	3447	7	NA	NA	-530	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_6	15.8289467607784	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCAGCTTTGTAAAT	-55290304	True	NA	0	True	AATAAA	-21	NA	55290343	55205348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55270164_55270285_55290249
transcript_47621.nnic	chr15	-	975	6	NIC	ENSG00000069974.16	novel	3447	7	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_5	16.9351705040132	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTGCAGCTTTGTAAAT	-55289281	True	NA	0	True	AATAAA	-21	NA	55289844	55205348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_55205706_55223888_55224013_55228608_55228713_55230400_55230487_55234781_55234957_55289715
transcript_47624.nnic	chr15	-	782	5	NNC	ENSG00000256061.7	novel	672	5	NA	NA	-26	12098	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	5.30919014539883	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGGTTGTTTTAAAAT	-55497915	True	NA	NA	False	AATAAA	-15	NA	55498403	55454862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_55454934_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47625.nic	chr15	-	928	4	ISM	ENSG00000256061.7	ENST00000457155.6	1567	8	-26	36405	-26	248	5prime_fragment	FALSE	canonical	3	15	junction_1	1.88561808316413	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGAGTGTCTTCTTTGCTT	-55497915	True	NA	NA	False	AATAAA	-32	NA	55498403	55466712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47626.nnic	chr15	+	948	3	NIC	ENSG00000069943.10	novel	1910	12	NA	NA	50	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAGTTTTATTGTTTC	55318912	False	NA	14	True	AATAAA	-19	NA	55319009	55355648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_55319414_55354797_55354979_55355285
transcript_47628.known	chr15	-	4589	16	FSM	ENSG00000261771.5	ENST00000565113.5	4589	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	36.5273717763664	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGCTGAGTACTGTTTCA	-55497872	True	NA	-29	True	AATAAA	-24	NA	55498360	55355247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_4763.known	chr1	+	768	3	FSM	ENSG00000164008.17	ENST00000650521.1	768	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	84	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATATATATATATAT	42765295	True	NA	26	True	CATAAA	-42	NA	42767305	42775759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42767391_42774736_42774869_42775208
transcript_47630.known	chr15	+	1668	12	FSM	ENSG00000069943.10	ENST00000539642.5	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.6851248738982	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCCTAGATAAATTAAC	55318997	False	NA	NA	False	NA	NA	NA	55319250	55355432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_55319414_55320274_55320411_55321269_55321391_55327530_55327636_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_47649.known	chr15	+	1812	9	FSM	ENSG00000069943.10	ENST00000565367.5	1812	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	16.5812393987904	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTAGTTTTATTGTTT	55318862	True	NA	13	True	AATAAA	-18	NA	55318959	55355647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_55319414_55329723_55329855_55333866_55334008_55339266_55339319_55340611_55340824_55341737_55341803_55350698_55350913_55354797_55354979_55355285
transcript_47650.known	chr15	-	3553	9	FSM	ENSG00000260916.8	ENST00000442196.8	3553	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	19.4164878389476	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGTTTCAGTCAATTTT	-55406692	True	NA	-20	True	AATAAA	-33	NA	55408359	55355238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55356410_55359538_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_47652.known	chr15	-	1897	9	FSM	ENSG00000256061.7	ENST00000348518.4	1897	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	6.23999198717434	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	NA	False	NA	NA	False	AATAAA	-15	NA	55498601	55430307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47654.known	chr15	-	6822	8	FSM	ENSG00000260916.8	ENST00000310958.10	6822	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	7.90504876128967	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTGAGTACTGTTT	NA	False	NA	-31	True	AATAAA	-22	NA	55408510	55355249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55360945_55365187_55365310_55371792_55372045_55376948_55377151_55378299_55378377_55385599_55385715_55389364_55389434_55408220
transcript_47658.known	chr15	-	1567	8	FSM	ENSG00000256061.7	ENST00000457155.6	1567	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.55388803794416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-55497889	True	NA	NA	False	AATAAA	-15	NA	55498377	55430307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55430780_55434904_55435059_55439471_55439582_55450221_55450368_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47659.nnic	chr15	-	1321	7	NIC	ENSG00000256061.7	novel	1897	9	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	6.04611904907235	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTTTGTATTAATATA	-55497915	True	NA	NA	False	AATAAA	-15	NA	55498403	55430307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_55430780_55432496_55432603_55434904_55435059_55439471_55439582_55491122_55491257_55497711_55497860_55498206
transcript_47661.nnic	chr15	-	801	5	NNC	ENSG00000256061.7	novel	672	5	NA	NA	-26	12117	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	5.30919014539883	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCCCTTGGTATATTA	-55497915	True	NA	NA	False	AATAAA	-34	NA	55498403	55454843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_55454934_55466929_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47663.nic	chr15	-	932	4	ISM	ENSG00000256061.7	ENST00000457155.6	1567	8	-26	36401	-26	252	5prime_fragment	FALSE	canonical	3	15	junction_1	1.88561808316413	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGTCTTCTTTGCTTGTGT	-55497915	True	NA	NA	False	AATAAA	-36	NA	55498403	55466708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_55467162_55491122_55491257_55497711_55497860_55498206
transcript_47666.nnic	chr15	+	828	3	NNC	ENSG00000261652.3	novel	604	2	NA	NA	16	-52	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACATGACAGTGACTTTTT	55408439	True	NA	6	True	AATAAA	-17	NA	55408510	55418712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_55408787_55417697_55417760_55418222
transcript_47670.known	chr15	+	868	2	FSM	ENSG00000261652.3	ENST00000569691.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTCAAAAGCCTTTCATAT	NA	False	NA	92	True	AATAAA	-35	NA	55408494	55418798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_55408787_55418222
transcript_47671.known	chr15	-	944	2	FSM	ENSG00000225973.4	ENST00000436697.3	944	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	-55317702	True	NA	0	True	AATAAA	-27	NA	55319123	55317183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55317868_55318863
transcript_47672.known	chr15	-	371	2	FSM	ENSG00000225973.4	ENST00000565225.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTATGCCAAAGATCAGA	-55317686	True	NA	-17	True	NA	NA	NA	55319107	55317703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55317868_55318900
transcript_47673.known	chr15	-	801	2	FSM	ENSG00000225973.4	ENST00000567948.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAAAACCCACAAATA	-55317740	True	NA	NA	False	AAAACA	-4	NA	55319161	55317321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55317868_55318906
transcript_47674.nnic	chr15	-	924	2	NIC	ENSG00000225973.4	novel	944	2	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTTAATTTTAATGTTT	-55317749	True	NA	0	True	AATAAA	-27	NA	55319170	55317183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_55317868_55318930
transcript_47675.known	chr15	-	833	3	FSM	ENSG00000166450.13	ENST00000561292.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGATTTTGCAGACAGT	-55742671	True	NA	NA	False	AATAAA	-11	NA	55743090	55738222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_55738500_55740381_55740685_55742837
transcript_47676.nic	chr15	+	1453	12	ISM	ENSG00000151575.14	ENST00000352903.6	1433	13	-14	17191	-14	-1439	5prime_fragment	FALSE	canonical	3	32	junction_6	9.54761880226627	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAATTCTCCTCCCTTA	56364405	True	NA	5	True	AATAAA	-18	NA	56365412	56428683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_56365478_56365578_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660_56394835_56412301_56412437_56427604_56427740_56428366
transcript_4768.known	chr1	-	627	3	FSM	ENSG00000228192.9	ENST00000416809.2	627	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTAGTTTTTTTTTTTT	-42846027	False	NA	NA	False	ACTAAA	-19	NA	42846362	42836927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42837179_42837669_42837940_42846256
transcript_47689.known	chr15	+	4440	8	FSM	ENSG00000151575.14	ENST00000558083.2	4440	8	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	10.913388145591	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTCTTGCAGTGGCTA	56364439	True	NA	NA	False	ATTAAA	-21	NA	56365446	56398341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56365671_56373440_56373505_56383951_56384032_56388471_56388521_56389317_56389401_56391242_56391419_56394164_56394248_56394660
transcript_47698.nic	chr15	+	696	4	NIC	ENSG00000151575.14	novel	2297	9	NA	NA	-14	299	combination_of_known_junctions	FALSE	canonical	1	3	junction_3	27.2763633939717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTTGATTGAATACATT	56364405	True	NA	12	True	AATAAA	-16	NA	56365412	56391717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_56365478_56365578_56365671_56373440_56373505_56391242
transcript_4770.known	chr1	-	650	3	FSM	ENSG00000177868.12	ENST00000372522.5	650	3	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_2	261	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42811656	False	NA	-35	True	AATAAA	-17	NA	42816804	42807051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42807501_42816430_42816581_42816753
transcript_47706.known	chr15	-	2030	10	FSM	ENSG00000138587.6	ENST00000260453.4	2030	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	9.98888270918113	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCTTTTTTGGTCTACTG	-56464384	True	NA	-2	True	AATAAA	-22	NA	56465137	56428723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56429194_56431372_56431499_56434137_56434396_56443429_56443538_56443637_56443855_56444443_56444674_56446840_56446944_56456393_56456522_56464025_56464248_56464969
transcript_4772.known	chr1	-	807	3	FSM	ENSG00000177868.12	ENST00000372521.9	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_2	23	3239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812249	True	NA	-35	True	AATAAA	-17	NA	42817397	42807051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42807501_42816430_42816581_42817189
transcript_47722.known	chr15	-	3666	6	FSM	ENSG00000137871.21	ENST00000558320.5	3666	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.0332871651931	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATATTCTCTGTTTTA	-56731637	True	NA	NA	False	AATAAA	-9	NA	56733494	56697762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707144_56707262_56707307_56733457
transcript_47723.nic	chr15	-	1738	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-113	33329	-43	1349	5prime_fragment	FALSE	canonical	3	33	junction_4	11.3419575030063	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCTACACTTGAATGTGT	-56731763	True	NA	-8	True	ATTAAA	-20	NA	56733620	56699823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_47725.nic	chr15	-	658	6	ISM	ENSG00000137871.21	ENST00000558002.5	2274	17	-186	34482	-116	196	5prime_fragment	FALSE	canonical	3	33	junction_4	11.3419575030063	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCAGATAGTTCTGTT	NA	False	NA	-11	True	AATAAA	-18	NA	56733693	56700976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_47727.known	chr15	-	541	2	FSM	ENSG00000137871.21	ENST00000560298.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCATCTTAAATATTTG	-56731720	True	NA	NA	False	NA	NA	NA	56733577	56732603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56733025_56733457
transcript_47729.known	chr15	-	4399	22	FSM	ENSG00000137871.21	ENST00000267807.12	4399	22	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	17.1092262707221	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTTCCAATCACTG	-56731652	True	NA	44	True	AATAAA	-18	NA	56733509	56630175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56632123_56635194_56635251_56642951_56642998_56654197_56654235_56654384_56654504_56658423_56658487_56666394_56666536_56666678_56666987_56668822_56668958_56676669_56676817_56677573_56677675_56678663_56678822_56682253_56682478_56689040_56689151_56689299_56689471_56693097_56693216_56700932_56701073_56701172_56701239_56704120_56704268_56707081_56707151_56707262_56707307_56733457
transcript_4773.nnic	chr1	-	804	3	NNC	ENSG00000177868.12	novel	807	3	NA	NA	28	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_2	267.5	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGCTCATACTTTAGCA	-42812221	True	NA	-35	True	AATAAA	-17	NA	42817369	42807051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_42807501_42816430_42816606_42817189
transcript_47734.nnic	chr15	-	948	3	NNC	ENSG00000285331.2	novel	1441	2	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	18.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	-56917284	True	NA	-17	True	AATAAA	-19	NA	56918512	56916725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_56917213_56917539_56917695_56918206
transcript_47735.known	chr15	-	1441	2	FSM	ENSG00000285331.2	ENST00000560587.1	1441	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATGCATAGAGATCTGAT	-56917265	True	NA	-17	True	AATAAA	-19	NA	56918493	56916725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_56917213_56917539
transcript_47736.known	chr15	+	596	2	FSM	ENSG00000276524.1	ENST00000621974.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCCAGGCTCTG	56887022	False	NA	38	True	AATAAA	-15	NA	56887106	56888219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56887171_56887687
transcript_47737.known	chr15	+	6114	21	FSM	ENSG00000140262.18	ENST00000333725.10	6114	21	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_14	47.8869502056667	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGGATGATTCCTCTT	56912472	True	NA	NA	False	AATAAA	-37	NA	56918643	57289853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57252420_57252493_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47739.known	chr15	+	4076	20	FSM	ENSG00000140262.18	ENST00000557843.5	4076	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.7131417188542	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTTGAATTCTAAATATT	56918766	False	NA	NA	False	AAGAAA	-2	NA	56918831	57288085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_56918907_56919901_56919989_56921025_56921099_57063749_57063824_57091788_57091892_57166401_57166467_57192157_57192294_57197772_57197826_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47740.known	chr15	+	3956	13	FSM	ENSG00000140262.18	ENST00000343827.7	3956	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	78.0612295288484	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACACAGTAAAATAGTGAGT	57218688	True	NA	9	True	AATAAA	-18	NA	57219465	57288506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57219591_57231151_57231258_57232290_57232431_57232711_57232857_57234042_57234108_57243471_57243551_57251349_57251424_57253261_57253469_57262093_57262209_57263111_57263275_57273029_57273263_57282444_57282599_57286156
transcript_47744.nic	chr15	+	1582	4	ISM	ENSG00000140262.18	ENST00000267811.9	6061	20	-73	225047	-71	-27023	5prime_fragment	FALSE	canonical	3	200	junction_1	27.5801861245835	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAGAGAGAGAGAGAA	56918516	False	NA	NA	False	NA	NA	NA	56918551	57064806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_56918907_56919891_56919989_56921025_56921099_57063749
transcript_47745.known	chr15	+	2141	3	FSM	ENSG00000247982.7	ENST00000502027.1	2141	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAAACAGAACTGTGGCTT	NA	False	NA	NA	False	AATAAA	-27	NA	57304724	57307758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57306623_57307042_57307069_57307541
transcript_47746.known	chr15	+	2530	3	FSM	ENSG00000247982.7	ENST00000501726.2	2538	3	0	8	0	3	multi-exon	FALSE	canonical	0	0	junction_1	18.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACAGAACTGTGGCTTGTG	NA	False	NA	NA	False	AATAAA	-30	NA	57300364	57307761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57300925_57305318_57307069_57307541
transcript_47747.known	chr15	+	1470	1	FSM	ENSG00000247982.7	ENST00000613170.1	1470	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCTTGTGTTTCATGT	NA	False	NA	NA	False	AATAAA	-38	NA	57306299	57307769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57306300_57307800
transcript_47748.known	chr15	+	7214	19	FSM	ENSG00000128849.11	ENST00000281282.6	7214	19	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	25.2994412664601	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTCCTGTGATTG	57372881	True	NA	9	True	AATAAA	-20	NA	57376504	57550717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57376568_57437984_57439602_57440376_57440472_57442372_57442479_57451499_57451602_57452140_57452290_57453682_57453819_57461679_57461893_57516779_57516987_57518392_57518498_57523488_57523642_57524580_57524752_57528653_57528816_57531689_57531780_57543695_57543780_57544472_57544598_57545591_57545701_57546075_57546240_57547354
transcript_47759.nnic	chr15	+	545	4	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	11.6714276000077	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57372862	True	NA	22	True	AGTAAA	-16	NA	57376485	57407282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_57376568_57402660_57402715_57405965_57406065_57406972
transcript_47761.nnic	chr15	+	595	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9027	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.1993265821489	284	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57385065	True	NA	22	True	AGTAAA	-16	NA	57386172	57407282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57402660_57402715_57405965_57406065_57406972
transcript_47765.nnic	chr15	+	728	4	NNC	ENSG00000128849.11	novel	915	8	NA	NA	10817	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	11.7756811551038	73	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57387796	True	NA	22	True	AGTAAA	-16	NA	57387962	57407282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57388228_57402660_57402715_57405965_57406065_57406972
transcript_47766.nnic	chr15	+	446	3	NIC	ENSG00000128849.11	novel	7214	19	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	8.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57372862	True	NA	22	True	AGTAAA	-16	NA	57376485	57407282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_57376568_57402660_57402715_57406972
transcript_47768.nnic	chr15	+	496	3	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9027	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	89	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57385065	True	NA	22	True	AGTAAA	-16	NA	57386172	57407282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57402660_57402715_57406972
transcript_47769.nnic	chr15	+	532	3	NNC	ENSG00000128849.11	novel	915	8	NA	NA	9036	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTCCTCATCTGTTTTGTT	57385074	True	NA	22	True	AGTAAA	-16	NA	57386181	57407282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_57386305_57405965_57406065_57406972
transcript_47775.known	chr15	+	2398	13	FSM	ENSG00000263155.6	ENST00000267853.10	2398	13	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_4	2.69258240356725	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTCTCTGTTTCATC	57591783	True	NA	7	True	AATAAA	-24	NA	57591903	57685364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57592110_57604268_57604356_57618032_57618189_57621607_57621701_57625778_57625893_57629701_57629855_57632433_57632560_57633612_57633742_57637694_57637775_57639439_57639546_57661449_57661534_57674967_57675069_57684401
transcript_47776.known	chr15	+	2181	12	FSM	ENSG00000263155.6	ENST00000380565.8	2181	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	3.13603423830188	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAATGTTGTCTCTCTGTTT	57591912	False	NA	3	True	AATAAA	-20	NA	57592032	57685360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57592110_57604268_57604356_57618032_57618189_57621607_57621701_57625778_57625893_57629701_57629855_57632433_57632560_57633612_57633742_57637694_57637775_57639439_57639546_57674967_57675069_57684401
transcript_4778.known	chr1	-	708	3	FSM	ENSG00000177868.12	ENST00000497437.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	269	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTCAGGTAGATGGTGTT	-42812104	True	NA	NA	False	NA	NA	NA	42817252	42813409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42813905_42816430_42816581_42817189
transcript_47781.known	chr15	+	4114	4	FSM	ENSG00000255529.9	ENST00000299638.8	4114	4	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	28.2960539062723	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCGTGTTTGGTGTCTTTC	57701716	True	NA	NA	False	TATAAA	-18	NA	57706713	57717557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57706956_57708713_57709359_57711983_57712189_57714535
transcript_47784.known	chr15	+	1648	4	FSM	ENSG00000255529.9	ENST00000494490.2	1648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.167419352646	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACATGGTATTAAAATTTT	57701697	True	NA	-15	True	NA	NA	NA	57706694	57714882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57707146_57708713_57709359_57711983_57712189_57714535
transcript_47785.known	chr15	+	3629	4	FSM	ENSG00000255529.9	ENST00000380557.4	3629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	129.167419352646	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATATGTCGTGTTTGGTGTCT	57701727	True	NA	NA	False	TATAAA	-15	NA	57706724	57717554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_57706956_57709184_57709359_57711983_57712189_57714535
transcript_47787.known	chr15	-	11158	16	FSM	ENSG00000137845.15	ENST00000260408.8	11158	16	0	0	0	0	multi-exon	FALSE	canonical	3	586	junction_9	66.4514526218619	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTGTGTTTGTGGATGAA	-58739818	True	NA	-1	True	AATAAA	-14	NA	58749707	58588808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58597642_58599597_58599725_58610296_58610518_58610998_58611108_58611807_58611992_58621470_58621622_58627699_58627884_58633195_58633360_58640776_58640961_58643885_58643979_58646054_58646205_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_47794.known	chr15	-	995	6	FSM	ENSG00000137845.15	ENST00000558733.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	276.71313665961	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTCAGTTATTTCTT	-58739881	True	NA	NA	False	ATTAAA	-21	NA	58749770	58655242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58655417_58665096_58665198_58679123_58679283_58682195_58682315_58717576_58717728_58749479
transcript_47795.nic	chr15	-	424	2	ISM	ENSG00000137845.15	ENST00000561149.1	529	4	-143	35436	-72	29657	5prime_fragment	FALSE	canonical	3	651	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGGATTATCTTACAATG	-58749834	True	NA	NA	False	AATAAA	-15	NA	58749863	58717687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_58717728_58749479
transcript_47796.known	chr15	-	1932	2	FSM	ENSG00000137845.15	ENST00000461408.2	1932	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCAGTCACTGTTGTGT	-58739830	True	NA	2	True	AATAAA	-28	NA	58749719	58747344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58749037_58749479
transcript_47797.known	chr15	-	1396	2	FSM	ENSG00000245975.2	ENST00000500929.2	1396	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTCTGCCTAAAAAAGAAT	-58770891	False	83	NA	False	AATAAA	-20	NA	58770974	58768071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58768880_58770386
transcript_47800.known	chr15	+	5905	14	FSM	ENSG00000157450.16	ENST00000348370.9	5905	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	23.9980275323575	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTACTCTGGTGACTTT	58983553	True	NA	98	True	GATAAA	-19	NA	58987662	59097419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58988069_59030803_59031703_59052304_59052432_59055681_59055846_59058355_59058551_59066763_59067084_59075953_59076216_59080935_59081285_59084128_59084255_59085658_59085786_59089666_59089760_59091058_59091155_59092536_59092641_59094782
transcript_47802.known	chr15	+	9250	9	FSM	ENSG00000128923.11	ENST00000559228.6	9250	9	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_8	11.4229757506527	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTTCGCTCTGTATATT	58770005	True	NA	NA	False	AATAAA	-20	NA	58771301	58861900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_47803.known	chr15	+	4820	9	FSM	ENSG00000128923.11	ENST00000450403.3	4820	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	18.060661671157	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	58770065	False	NA	NA	False	AATAGA	-16	NA	58771361	58857533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58831773_58831917_58847296_58847471_58851770_58851966_58854484
transcript_47806.known	chr15	+	1859	9	FSM	ENSG00000128923.11	ENST00000560289.5	1859	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	31.4632722392316	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTGTGTTATTTTGTAAC	58769989	True	NA	NA	False	GATAAA	-21	NA	58771285	58854591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810287_58821716_58821824_58831773_58831917_58847296_58847471_58851770_58851966_58854481
transcript_47807.known	chr15	+	4866	8	FSM	ENSG00000128923.11	ENST00000316848.9	4866	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	28.4375434514133	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTAGAGCTATTGTGTCT	58771146	True	NA	NA	False	AATAGA	-35	NA	58771191	58857552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_58772236_58787905_58787964_58802312_58802378_58810229_58810389_58821716_58821820_58847296_58847471_58851770_58851966_58854484
transcript_47810.known	chr15	-	4168	21	FSM	ENSG00000137776.17	ENST00000380516.7	4168	21	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_15	75.2750954831676	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTATGTGTCTTTGTTTTC	-58924688	True	NA	-28	True	AATAAA	-16	NA	58933679	58879049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899938_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47830.known	chr15	-	1373	11	FSM	ENSG00000137776.17	ENST00000249736.11	1373	11	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_5	98.8144220243179	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGATGAAAAGAGTAG	-58924588	True	NA	NA	False	AAGAAA	-13	NA	58933579	58894157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58899468_58899884_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47837.known	chr15	-	896	10	FSM	ENSG00000137776.17	ENST00000558756.5	896	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	123.782166289648	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGATTTATTTTTATTT	-58933394	False	NA	NA	False	GATAAA	-27	NA	58933449	58894089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58913498_58913697_58916934_58917000_58932355_58932444_58933403
transcript_4784.known	chr1	+	4760	5	FSM	ENSG00000164008.17	ENST00000372525.7	4760	5	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	19.9624647776771	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCTTAGATGATGCTTGA	42765238	True	NA	NA	False	AATAAA	-23	NA	42767248	42779491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42767391_42767508_42767625_42773562_42773650_42774736_42774869_42775208
transcript_4785.known	chr1	+	3440	12	FSM	ENSG00000164010.15	ENST00000372517.8	3440	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.96536480550911	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTGTTATTTTCATTGT	42816838	True	NA	21	True	AATAAA	-22	NA	42817121	42844991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42817254_42825622_42825739_42830443_42830534_42830767_42831116_42835037_42835155_42835731_42835765_42837157_42837191_42838900_42838922_42840032_42840054_42840151_42840179_42840269_42840297_42842516
transcript_47853.nic	chr15	-	706	4	ISM	ENSG00000137776.17	ENST00000557950.5	924	7	-121	13003	0	79	5prime_fragment	FALSE	canonical	3	407	junction_1	42.8978113919839	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGAAGTCTCAGAATTTT	-58924688	True	NA	0	True	AATAAA	-22	NA	58933679	58913419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_58913697_58916934_58917000_58932355_58932444_58933403
transcript_47858.known	chr15	-	685	3	FSM	ENSG00000137776.17	ENST00000484498.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	24.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTTTTGTATATAATATA	-58924583	True	NA	NA	False	NA	NA	NA	58933574	58916573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58917000_58932355_58932444_58933403
transcript_47860.known	chr15	-	505	2	FSM	ENSG00000137776.17	ENST00000474342.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGAGAACAGTTCTTTAT	-58924625	True	NA	NA	False	NA	NA	NA	58933616	58932151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58932444_58933403
transcript_47865.known	chr15	-	3022	19	FSM	ENSG00000137776.17	ENST00000492526.5	3022	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_16	150.536407146388	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTGCTAAAGTGTTGAGAA	-58924588	True	NA	-7	True	AATAAA	-17	NA	58933579	58879428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_58880108_58883625_58883787_58886974_58887120_58887225_58887541_58888384_58888556_58889429_58889555_58890280_58890462_58892896_58893061_58893278_58893365_58893820_58893988_58894089_58894194_58894432_58894583_58897114_58897234_58898802_58898853_58901259_58901288_58912562_58912611_58916934_58917000_58932355_58932444_58933403
transcript_47866.known	chr15	-	8644	28	FSM	ENSG00000157483.9	ENST00000288235.9	8644	28	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_12	30.6448303004383	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGTCTTTGGAATATG	-59370805	True	NA	NA	False	AGTAAA	-20	NA	59372871	59132433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59137457_59138197_59138368_59153589_59153792_59158286_59158380_59161072_59161231_59163156_59163304_59171896_59172043_59173745_59173916_59174125_59174241_59178392_59178538_59188117_59188217_59195460_59195568_59202325_59202408_59205399_59205486_59208680_59208849_59210513_59210601_59214227_59214315_59214639_59214721_59217890_59218088_59223058_59223192_59224688_59224824_59227458_59227591_59231701_59231792_59236584_59236673_59256283_59256379_59261419_59261510_59272305_59272450_59372497
transcript_4787.known	chr1	+	1935	5	FSM	ENSG00000164011.18	ENST00000372504.5	1935	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	16.5755844542508	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843438	True	NA	NA	False	AGTAAA	-16	NA	42846636	42852477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850658_42850744_42850949
transcript_47871.known	chr15	-	578	2	FSM	ENSG00000157483.9	ENST00000558646.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTTTATGCTGGGTGC	-59370805	True	NA	NA	False	NA	NA	NA	59372871	59272245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59272450_59372497
transcript_47874.known	chr15	+	1488	9	FSM	ENSG00000157456.8	ENST00000288207.7	1488	9	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_5	42.4497865130085	4764	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATGTGTATTTATTTGT	59091902	True	NA	17	True	AATAAA	-23	NA	59105145	59125045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_59105293_59107321_59107451_59107556_59107671_59114443_59114615_59114717_59114877_59116689_59116927_59117227_59117369_59123516_59123628_59124766
transcript_47877.known	chr15	-	2515	10	FSM	ENSG00000140299.13	ENST00000612191.4	2515	10	0	0	0	0	multi-exon	TRUE	canonical	3	199	junction_1	28.5298197905972	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACAAAAAGTTTAATTACC	NA	False	NA	NA	False	AATAAA	-17	NA	59689443	59662864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59664121_59668891_59668991_59669275_59669363_59671182_59671315_59672636_59672740_59677910_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_4788.known	chr1	+	1859	4	FSM	ENSG00000164011.18	ENST00000372506.5	1859	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	3.2659863237109	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843429	True	NA	NA	False	AGTAAA	-16	NA	42846627	42852477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42849290_42849414_42849564_42849743_42850949
transcript_47884.known	chr15	-	970	6	FSM	ENSG00000140307.11	ENST00000396063.5	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	587.497268078755	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTAATAACTGGTGAAGC	-59645128	True	NA	-20	True	AATAAA	-16	NA	59657514	59638868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59656814_59657034_59657405
transcript_47896.known	chr15	-	832	5	FSM	ENSG00000140299.13	ENST00000560458.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_2	15.1389398572027	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGAACACAGGCGCTAGGT	-59684175	True	NA	NA	False	AGTAAA	-11	NA	59689339	59677812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59678088_59679591_59679769_59680240_59680309_59682407_59682515_59689134
transcript_47898.known	chr15	-	863	4	FSM	ENSG00000140299.13	ENST00000477543.1	863	4	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	15.6276108929747	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGTGACTTTTTAAGTAGG	-59684145	True	NA	NA	False	NA	NA	NA	59689309	59679255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59679769_59680240_59680309_59682407_59682515_59689134
transcript_479.known	SIRV6	+	1528	10	FSM	SIRV6A	SIRV612	1528	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9209.96583551524	6050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAGACCGGGAGTATACT	NA	False	NA	NA	False	NA	NA	NA	1087	11825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_4790.known	chr1	+	1683	3	FSM	ENSG00000164011.18	ENST00000372507.5	1683	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	1.5	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843427	True	NA	NA	False	AGTAAA	-16	NA	42846625	42852477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42849290_42849414_42850949
transcript_47900.known	chr15	-	518	3	FSM	ENSG00000140307.11	ENST00000267869.8	518	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	554.5	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTGAAGCTATTAAGGTA	-59645111	True	NA	-10	True	AATAAA	-26	NA	59657497	59638858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59657405
transcript_47903.known	chr15	-	1559	5	FSM	ENSG00000140307.11	ENST00000396060.7	1559	5	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_2	69.3194597497701	3647	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCTATGCATGTATTT	-59645129	True	NA	-3	True	AATAAA	-18	NA	59657515	59638061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59642135_59642263_59650668_59650774_59652205_59652327_59657405
transcript_47904.known	chr15	-	633	4	FSM	ENSG00000140307.11	ENST00000396064.7	633	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	600.816296568446	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAATAACTGGTGAAGCTAT	-59645134	True	NA	-17	True	AATAAA	-19	NA	59657520	59638865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59639158_59650668_59650774_59652205_59652327_59657405
transcript_47905.known	chr15	-	1278	2	FSM	ENSG00000140307.11	ENST00000480768.1	1278	2	0	0	0	0	multi-exon	FALSE	canonical	3	1287	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAACATATT	-59645155	True	NA	NA	False	AAAAAG	-2	NA	59657541	59651184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59652327_59657405
transcript_47906.known	chr15	-	382	4	FSM	ENSG00000140307.11	ENST00000559706.1	382	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	535.007372742553	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGATGTTGAATTCAGA	-59645135	True	NA	NA	False	NA	NA	NA	59657521	59642213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_59642263_59650668_59650765_59652205_59652327_59657405
transcript_47908.known	chr15	+	795	1	FSM	ENSG00000234797.5	ENST00000484430.1	795	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8371	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTCAGACTTCAAATAGTG	NA	False	NA	NA	False	NA	NA	NA	59768351	59769146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_59768400_59769100
transcript_47914.nnic	chr15	+	432	3	NNC	ENSG00000171956.7	novel	401	2	NA	NA	5043	-5597	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTACAGTGTTTATAGAGT	60009253	True	NA	NA	False	AATAAA	-16	NA	60009353	60036302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_60009439_60025755_60025910_60036109
transcript_47919.known	chr15	-	757	3	FSM	ENSG00000259223.2	ENST00000560503.2	757	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGATCTGTGCTATTTTG	-60118281	True	NA	NA	False	AATAAA	-19	NA	60118320	60073553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60074049_60074800_60074936_60118193
transcript_47922.known	chr15	-	1747	15	FSM	ENSG00000182718.18	ENST00000678870.1	1747	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	628.695641136213	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397257_60397339_60397942
transcript_47925.known	chr15	-	1920	15	FSM	ENSG00000182718.18	ENST00000558169.6	1920	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_6	692.11629021695	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387404	True	NA	NA	False	AATAAA	-22	NA	60397988	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354209_60355914_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397257_60397339_60397942
transcript_47926.known	chr15	-	1790	15	FSM	ENSG00000182718.18	ENST00000557906.6	1790	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_12	626.999564658248	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397257_60397339_60397942
transcript_47929.known	chr15	-	1676	14	FSM	ENSG00000182718.18	ENST00000396024.7	1676	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	571.435304905383	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACATTTCGAATGCTCAG	-60387402	True	NA	NA	False	AATAAA	-32	NA	60397986	60347133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60390212_60390318_60397942
transcript_47930.known	chr15	-	1989	14	FSM	ENSG00000182718.18	ENST00000678061.1	1989	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	574.645380743174	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393012_60393441_60397942
transcript_47931.known	chr15	-	1964	14	FSM	ENSG00000182718.18	ENST00000559780.6	1964	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	573.222624740853	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393037_60393441_60397942
transcript_47932.known	chr15	-	1761	14	FSM	ENSG00000182718.18	ENST00000677968.1	1761	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	575.536826843647	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387400	True	NA	NA	False	AATAAA	-22	NA	60397984	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60393238_60393441_60397942
transcript_47933.known	chr15	-	1838	14	FSM	ENSG00000182718.18	ENST00000560468.6	1838	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	572.504835771933	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396150_60396428_60397942
transcript_47934.known	chr15	-	1709	14	FSM	ENSG00000182718.18	ENST00000559956.6	1709	14	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_13	573.573878487192	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396279_60396428_60397942
transcript_47936.known	chr15	-	1444	14	FSM	ENSG00000182718.18	ENST00000421017.6	1444	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_13	509.824485403712	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTTAGAAACACGTACTTT	-60387402	True	NA	-17	True	AATAAA	-11	NA	60397986	60347341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397257_60397339_60397942
transcript_4794.known	chr1	+	1577	2	FSM	ENSG00000164011.18	ENST00000372508.7	1577	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACCCGTGTACTTATTTGG	42843410	True	NA	NA	False	AGTAAA	-16	NA	42846608	42852477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42846658_42850949
transcript_47940.known	chr15	-	1444	13	FSM	ENSG00000182718.18	ENST00000332680.8	1444	13	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_12	440.248690767187	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGTACTTTGTGGCCCTGC	-60387401	True	NA	-7	True	AATAAA	-21	NA	60397985	60347331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397870
transcript_47941.known	chr15	-	1560	13	FSM	ENSG00000182718.18	ENST00000679109.1	1560	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	442.686652410282	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60398122	False	NA	NA	False	AATAAA	-22	NA	60398157	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398114
transcript_47942.known	chr15	-	1615	13	FSM	ENSG00000182718.18	ENST00000559818.6	1615	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	444.854189594748	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60398707	False	NA	NA	False	AATAAA	-22	NA	60398742	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60398644
transcript_47943.known	chr15	-	1542	13	FSM	ENSG00000182718.18	ENST00000559113.6	1542	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_10	626.456746755557	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60386027_60386087_60397257_60397339_60397942
transcript_4795.known	chr1	-	541	2	FSM	ENSG00000117394.24	ENST00000460369.3	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGTTTTGACAGTTTGG	-42913895	True	NA	NA	False	AATAAA	-13	NA	42958859	42951615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_42951931_42958633
transcript_47952.known	chr15	-	908	3	FSM	ENSG00000182718.18	ENST00000560936.2	908	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	72.5	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCTCGCAGTCATGGCCGT	-60387402	True	NA	NA	False	ATTAAA	-21	NA	60397986	60395644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60396428_60397257_60397339_60397942
transcript_47953.known	chr15	-	567	2	FSM	ENSG00000182718.18	ENST00000560495.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGGGTTTGTCCAAAAAT	-60387404	True	NA	NA	False	NA	NA	NA	60397988	60395906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60396428_60397942
transcript_47954.known	chr15	-	1554	13	FSM	ENSG00000182718.18	ENST00000451270.7	1554	13	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_12	114.214314874372	2917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCTGAGTCACACAATCC	-60387402	True	NA	NA	False	AATAAA	-15	NA	60397986	60347150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_47955.known	chr15	-	694	5	FSM	ENSG00000182718.18	ENST00000557937.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	684.64844993617	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGTGAAATAAGGAAGATTT	-60387402	True	NA	NA	False	AATAAA	-10	NA	60397986	60362626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60363023_60364428_60364524_60382341_60382442_60386027_60386087_60397942
transcript_47956.known	chr15	-	1616	14	FSM	ENSG00000182718.18	ENST00000558558.6	1616	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	574.645380743174	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCACACAATCCACATTTC	-60387402	True	NA	NA	False	AATAAA	-22	NA	60397986	60347143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60347690_60349074_60349198_60351192_60351252_60351723_60351820_60352382_60352477_60354153_60354214_60355918_60355999_60357145_60357237_60360940_60361055_60364428_60364524_60382341_60382442_60386027_60386087_60396372_60396428_60397942
transcript_47957.known	chr15	-	574	2	FSM	ENSG00000182718.18	ENST00000560546.5	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	1313	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCACTCTGTTGCCAGGC	-60387402	True	NA	NA	False	NA	NA	NA	60397986	60385556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60386087_60397942
transcript_47960.known	chr15	+	904	5	FSM	ENSG00000245534.7	ENST00000558140.6	904	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTGCCTTACTGACAGA	60479016	True	NA	NA	False	NA	NA	NA	60479184	60529889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_60479399_60488523_60488592_60510407_60510534_60528579_60528728_60529541
transcript_47962.known	chr15	+	890	5	FSM	ENSG00000245534.7	ENST00000660694.1	890	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGAGTCTCATGTTTTAT	60478985	True	NA	NA	False	AATAAA	-44	NA	60479153	60547966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_60479399_60488523_60488592_60510407_60510534_60546264_60546467_60547717
transcript_47973.known	chr15	-	7060	16	FSM	ENSG00000128915.12	ENST00000558181.5	7060	16	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_13	63.2304427383589	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATCTACTGTTGCCATGT	-60473250	True	NA	-7	True	AATAAA	-19	NA	60479160	60419612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468163_60476062_60476168_60477936_60478070_60479002
transcript_47974.known	chr15	-	7206	16	FSM	ENSG00000128915.12	ENST00000261520.9	7206	16	0	0	0	0	multi-exon	TRUE	canonical	3	251	junction_13	43.6874759577108	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTGTTGCCATGTCCCC	-60473232	True	NA	-3	True	AATAAA	-23	NA	60479142	60419608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60423763_60428428_60428688_60431933_60431985_60436142_60436228_60442415_60442546_60447969_60448146_60448847_60449842_60453602_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_4798.known	chr1	+	1124	4	FSM	ENSG00000227533.7	ENST00000431759.5	1124	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	3.85861230093008	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTTAAGCTTTATTTT	42958633	True	NA	5	True	AATAAA	-17	NA	42959048	42983358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42959578_42970248_42970395_42973973_42974189_42983124
transcript_47982.known	chr15	-	3796	9	FSM	ENSG00000128915.12	ENST00000561114.5	3796	9	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_6	56.9614727249919	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTATCATGGATTTTC	-60473163	True	NA	NA	False	AATAAA	-16	NA	60479073	60451094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60453785_60455002_60455163_60455325_60455443_60456656_60456795_60466593_60466714_60468060_60468323_60476062_60476168_60477936_60478070_60479002
transcript_47993.nic	chr15	-	661	4	ISM	ENSG00000128915.12	ENST00000561114.5	3796	9	-94	16970	-7	106	5prime_fragment	FALSE	canonical	3	251	junction_1	72.3064466159292	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTATGTATTGTGTTCT	NA	False	NA	0	True	AATAAA	-22	NA	60479167	60468064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_60468323_60476062_60476168_60477936_60478070_60479002
transcript_47994.nic	chr15	-	590	4	ISM	ENSG00000128915.12	ENST00000560072.5	559	5	-62	1378	-5	106	5prime_fragment	FALSE	canonical	3	9	junction_3	166.006693305488	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTATGTATTGTGTTCT	-60473255	True	NA	0	True	AATAAA	-22	NA	60479165	60468064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_60468323_60476062_60476168_60477936_60478070_60479071
transcript_47998.known	chr15	-	1701	10	FSM	ENSG00000069667.16	ENST00000449337.6	1701	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1.24721912892465	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTTGAACTTGTTTTTCTC	-60592079	True	NA	-24	True	AATGAA	-10	NA	60592541	60497284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_60497620_60499891_60500005_60500958_60501070_60502759_60502868_60503534_60503668_60505507_60505630_60511225_60511622_60514615_60514758_60531765_60531852_60592386
transcript_47999.known	chr15	-	492	2	FSM	ENSG00000069667.16	ENST00000558904.2	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGAATGTGTGTGTGTGTGT	-61228446	False	NA	NA	False	AATAAA	-28	NA	61229155	61176067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_61176457_61229052
transcript_4800.nnic	chr1	+	760	3	NNC	ENSG00000227533.7	novel	3106	3	NA	NA	-100	-2083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGAGTGTGGTGTTGT	42958932	False	NA	NA	False	NA	NA	NA	42958948	42974345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_42959191_42970248_42970395_42973973
transcript_48000.nnic	chr15	-	782	7	NNC	ENSG00000129003.19	novel	13403	85	NA	NA	34	-38798	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.68624070307733	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACTCATAAATGCCTTT	-62057788	True	NA	NA	False	AATAAA	-14	NA	62060413	62022510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_62022759_62023410_62023521_62033440_62033543_62034956_62035053_62041323_62041367_62044211_62044256_62060274
transcript_48003.known	chr15	+	648	2	FSM	ENSG00000259251.2	ENST00000560813.2	648	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAGTAGTGCCTTTTTAAG	NA	False	NA	NA	False	TATAAA	-9	NA	62060502	62061274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_62060844_62060967
transcript_4801.nnic	chr1	+	561	3	NNC	ENSG00000227533.7	novel	1124	4	NA	NA	-43	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCTTCTTAAGCTTTA	42958590	True	NA	1	True	AATAAA	-13	NA	42959005	42983354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_42959191_42970248_42970395_42983124
transcript_48027.nic	chr15	+	1135	10	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	301	junction_9	468.529404060338	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63007004	True	NA	20	True	AATAAA	-15	NA	63042743	63066093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_48028.known	chr15	+	1295	10	FSM	ENSG00000140416.23	ENST00000288398.10	1295	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	527.138630535146	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63006892	True	NA	20	True	AATAAA	-15	NA	63042631	63066093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_48030.known	chr15	+	1217	10	FSM	ENSG00000140416.23	ENST00000403994.9	1217	10	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_9	537.249327134221	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGTTAGTGTTTGGCTG	63007007	True	NA	8	True	AATAAA	-24	NA	63042746	63066178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_48031.known	chr15	+	1097	10	FSM	ENSG00000140416.23	ENST00000560970.6	1097	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	579.093437949821	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63042699	False	NA	20	True	AATAAA	-15	NA	63042829	63066093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064191_63065895
transcript_48038.known	chr15	+	1100	10	FSM	ENSG00000140416.23	ENST00000561266.6	1100	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	633.889755574439	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTCTGTTTGCTATTCTT	63007037	False	NA	18	True	AATAAA	-13	NA	63042776	63066091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_4804.known	chr1	+	3075	3	FSM	ENSG00000227533.7	ENST00000416689.2	3106	3	31	0	4	0	multi-exon	FALSE	canonical	2	7	junction_2	4.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	42958688	True	NA	NA	False	NA	NA	NA	42959103	42976428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_42959578_42970248_42970395_42973973
transcript_4805.nnic	chr1	+	947	3	NIC	ENSG00000227533.7	novel	1124	4	NA	NA	-42	-4	intron_retention	FALSE	canonical	0	0	junction_2	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTCCTTCTTAAGCTTTA	42958591	True	NA	1	True	AATAAA	-13	NA	42959006	42983354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_42959578_42970248_42970395_42983124
transcript_48052.nic	chr15	+	1055	9	NIC	ENSG00000140416.23	novel	1295	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	112	junction_8	457.204822809209	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGTTTGCTATTCTTT	63007004	True	NA	19	True	AATAAA	-14	NA	63042743	63066092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63065895
transcript_48054.known	chr15	+	1717	9	FSM	ENSG00000140416.23	ENST00000358278.7	1717	9	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_2	187.662429644295	1798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACATTGTAGGACATTT	63006945	True	NA	-5	True	AATAAA	-1	NA	63042684	63071889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_48059.known	chr15	+	977	9	FSM	ENSG00000140416.23	ENST00000559556.5	977	9	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_5	447.724454882688	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACACCTGCTTACCCCTT	63007018	True	NA	NA	False	NA	NA	NA	63042757	63071222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_48069.known	chr15	+	933	9	FSM	ENSG00000140416.23	ENST00000559397.6	933	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	618.558354159088	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACATTCTTTCGTTTTGTT	63007030	False	NA	NA	False	NA	NA	NA	63042769	63071190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_4807.nnic	chr1	+	824	3	NNC	ENSG00000227533.7	novel	3106	3	NA	NA	-36	-2083	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCTGAGTGTGGTGTTGT	42958597	True	NA	NA	False	NA	NA	NA	42959012	42974345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_42959319_42970248_42970395_42973973
transcript_48071.known	chr15	+	1670	9	FSM	ENSG00000140416.23	ENST00000267996.11	1670	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	652.228439658989	4386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGGTCCTGTCATTTG	63007018	True	NA	21	True	AATAAA	-27	NA	63042757	63071915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63043832_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63071089
transcript_48080.nic	chr15	+	1036	9	NIC	ENSG00000140416.23	novel	941	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	301	junction_8	547.317777895073	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63045028	True	NA	20	True	AATAAA	-15	NA	63048480	63066093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_48083.known	chr15	+	941	9	FSM	ENSG00000140416.23	ENST00000559281.6	941	9	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_8	576.205692439774	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTGCTATTCTTTT	63048286	False	NA	20	True	AATAAA	-15	NA	63048575	63066093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063_63064143_63065895
transcript_48103.known	chr15	+	943	8	FSM	ENSG00000140416.23	ENST00000404484.9	943	8	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	377.917980519583	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCACTGTCACAGAAACATC	63045018	True	NA	NA	False	TTTAAA	-38	NA	63048470	63071263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061197_63061274_63062214_63062278_63062575_63062646_63071089
transcript_48105.known	chr15	+	1968	8	FSM	ENSG00000140416.23	ENST00000558910.3	1968	8	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_7	576.204328837808	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGAATGTTTCAGAGTTC	63045034	True	NA	10	True	ATTAAA	-26	NA	63048486	63065278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63048708_63056984_63057119_63059562_63059681_63060868_63060940_63061712_63061789_63062214_63062278_63062575_63062646_63064063
transcript_48121.known	chr15	+	1031	6	FSM	ENSG00000140416.23	ENST00000558314.5	1031	6	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	536.952139394192	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGATAAGGTACTGATGGCT	63007011	True	NA	52	True	NA	NA	NA	63042750	63061265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63043705_63044153_63056984_63057119_63059562_63059681_63060868_63060940_63061197
transcript_48125.known	chr15	+	3957	2	FSM	ENSG00000140416.23	ENST00000610733.1	3957	2	0	0	0	0	multi-exon	FALSE	canonical	3	1176	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGTAGCTATCATTTGAGTT	63006947	True	NA	34	True	AAAACA	-20	NA	63042686	63047726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63042944_63044026
transcript_48131.known	chr15	-	693	5	FSM	ENSG00000185088.14	ENST00000635699.1	693	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2263.79316634714	2632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-63125910	True	NA	-7	True	AATAAA	-19	NA	63157477	63153852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786_63156974_63157399
transcript_4814.nnic	chr1	+	682	5	NNC	ENSG00000186973.11	novel	500	4	NA	NA	-25036	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	1.11803398874989	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	43119452	True	NA	9	True	AATAAA	-19	NA	43120116	43156396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43120273_43145126_43145298_43150760_43150821_43152827_43152932_43156205
transcript_48140.known	chr15	-	923	4	FSM	ENSG00000185088.14	ENST00000455271.5	923	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	2189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTCTTTTTCTTTTTTT	-63157271	False	NA	-7	True	AATAAA	-19	NA	63157281	63153852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63156786
transcript_48146.known	chr15	-	528	4	FSM	ENSG00000185088.14	ENST00000411926.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2135.16947024508	1036	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAATCCCCTCTTTTTCT	-63158011	True	NA	-13	True	AATAAA	-13	NA	63158021	63153858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63154061_63155620_63155732_63156412_63156522_63157915
transcript_48155.known	chr15	+	774	9	FSM	ENSG00000166128.13	ENST00000558119.5	774	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	93.7456665665139	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTCACCCAGCCTCAGA	63184306	True	NA	NA	False	NA	NA	NA	63189593	63263679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63251283_63251343_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_48159.known	chr15	+	4800	8	FSM	ENSG00000166128.13	ENST00000321437.9	4800	8	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	25.5885816372085	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAATGGCTCTCTGAAAT	63184318	True	NA	66	True	AATAAA	-23	NA	63189605	63267776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691_63262743_63263526
transcript_48164.known	chr15	+	584	7	FSM	ENSG00000166128.13	ENST00000559006.1	584	7	0	0	0	0	multi-exon	FALSE	canonical	3	196	junction_5	25.4798395250485	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTGTTTGGCATTTGAT	63184318	True	NA	57	True	NA	NA	NA	63189605	63262776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63189749_63244755_63244817_63249644_63249706_63255506_63255585_63256504_63256595_63259626_63259693_63262691
transcript_48165.known	chr15	+	4138	6	FSM	ENSG00000138613.14	ENST00000261879.10	4138	6	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_3	15.4350251052598	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGTTTCCTGTTCT	63275136	True	NA	10	True	AATAAA	-22	NA	63277604	63309126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63287423_63287547_63302344_63302473_63305613
transcript_48167.known	chr15	+	685	5	FSM	ENSG00000138613.14	ENST00000380343.8	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	44.7325384926901	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAACCGCAGACTACATCT	63275141	True	NA	-88	True	NA	NA	NA	63277609	63305801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63277737_63279160_63279332_63286557_63286629_63302344_63302473_63305613
transcript_48171.known	chr15	+	5499	16	FSM	ENSG00000140455.17	ENST00000559192.5	5499	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	47.9054624581929	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	63504713	False	NA	19	True	ATTAAA	-23	NA	63504733	63594640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63532646_63532708_63533802_63533919_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_48173.known	chr15	+	2439	16	FSM	ENSG00000140455.17	ENST00000558157.5	2439	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	45.4030835957207	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTTGTCCTGCAAATACAA	63502248	True	NA	6	True	AATAAA	-17	NA	63504634	63591444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63529013_63529167_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_48174.known	chr15	+	5517	15	FSM	ENSG00000140455.17	ENST00000380324.8	5517	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	21.1351337244651	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGACTTATTTCTGAAC	63502206	True	NA	12	True	ATTAAA	-16	NA	63504592	63594633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63532646_63532708_63537024_63537157_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_48175.known	chr15	+	5474	14	FSM	ENSG00000140455.17	ENST00000540797.5	5474	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	43.3773861952988	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTCTGAACACCTTTT	NA	False	NA	19	True	ATTAAA	-23	NA	63504510	63594640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_63504831_63532646_63532708_63553714_63553799_63556666_63556749_63558105_63558189_63559856_63559971_63562894_63563009_63570432_63570580_63574045_63574153_63574322_63574404_63588304_63588424_63588701_63588816_63588943_63589012_63590660
transcript_48182.known	chr15	-	15197	78	FSM	ENSG00000103657.14	ENST00000443617.7	15197	78	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_33	22.3518303000037	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTGGCTCTTGGTATTGCT	-63832295	True	NA	0	True	AATAAA	-19	NA	63833948	63608617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_63609267_63612250_63612557_63615767_63615921_63616429_63616683_63622814_63622892_63623724_63623891_63624157_63624328_63625984_63626155_63628676_63628816_63630465_63630636_63632708_63632812_63633847_63633971_63634732_63634889_63635960_63636143_63637504_63637644_63638410_63638537_63638710_63638777_63640151_63640446_63641469_63641644_63642956_63643059_63643403_63643551_63644991_63645098_63645482_63645683_63648068_63648200_63649724_63649926_63651252_63651381_63652413_63652542_63654118_63654325_63655741_63655956_63656087_63656359_63658543_63658719_63659735_63659937_63660972_63661026_63661752_63662022_63662983_63663205_63664469_63664595_63665918_63666151_63666355_63666473_63669537_63669699_63672495_63672695_63674341_63675118_63677844_63678366_63680076_63680161_63680536_63680777_63686358_63686536_63689588_63689700_63690540_63690648_63692410_63692567_63693963_63694158_63694311_63694550_63694773_63694895_63696123_63696340_63698727_63698997_63706779_63706832_63712774_63712896_63713352_63713666_63716301_63716474_63718573_63718695_63718782_63718898_63723181_63723356_63725291_63725514_63727646_63727839_63729235_63729369_63729496_63729650_63732923_63733146_63734723_63734850_63746917_63747084_63747723_63747859_63749366_63749539_63749646_63749792_63752957_63753086_63754504_63754649_63755228_63755326_63756436_63756749_63758174_63758370_63764095_63764192_63774693_63775650_63833826
transcript_48183.known	chr15	-	636	6	FSM	ENSG00000166797.11	ENST00000559705.1	636	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	579.35757525038	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAACTTACGGGAAATT	-64081508	True	NA	NA	False	GATAAA	-33	NA	64093853	64072980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64090197_64090316_64093644
transcript_4819.nnic	chr1	+	515	4	NNC	ENSG00000186973.11	novel	365	2	NA	NA	-25040	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	1.24721912892465	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	43119448	True	NA	9	True	AATAAA	-19	NA	43120112	43156396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43120273_43150760_43150821_43152827_43152932_43156205
transcript_48195.known	chr15	-	919	5	FSM	ENSG00000166797.11	ENST00000300030.8	919	5	0	0	0	0	multi-exon	FALSE	canonical	3	1044	junction_2	98.9504295089213	8615	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGACTCACTGTTTTTAT	-64081493	True	NA	-28	True	AATAAA	-18	NA	64093838	64072564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64073029_64075491_64075538_64081101_64081152_64088686_64088852_64093644
transcript_48196.known	chr15	-	826	4	FSM	ENSG00000166797.11	ENST00000380290.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_2	472.269932230381	1773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGATGATTCTTATAATGAC	-64081463	True	NA	-41	True	AATAAA	-5	NA	64093808	64072577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64073029_64075491_64075538_64088686_64088852_64093644
transcript_48199.known	chr15	+	1374	13	FSM	ENSG00000028528.15	ENST00000561026.5	1374	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	119.561322016036	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGACCAAGGACCCCAGAGC	64087431	True	NA	NA	False	NA	NA	NA	64096013	64137618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64096173_64112572_64112685_64123502_64123547_64126078_64126221_64127173_64127253_64127730_64127807_64129915_64130030_64130227_64130322_64131686_64131893_64134663_64134808_64136329_64136411_64136860_64136933_64137567
transcript_48201.known	chr15	+	3600	7	FSM	ENSG00000157734.14	ENST00000325881.9	3600	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.07769755210323	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGACGCGTCTGTCCACGT	64150993	True	NA	22	True	AATAAA	-18	NA	64151730	64157481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64151851_64152242_64152327_64152637_64152743_64153244_64153340_64153651_64153685_64153934_64154003_64154386
transcript_48212.known	chr15	-	888	5	FSM	ENSG00000166794.6	ENST00000680343.1	888	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2271.51594480426	5343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-64162497	False	NA	NA	False	NA	NA	NA	64162581	64155739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162492
transcript_48215.known	chr15	-	869	5	FSM	ENSG00000166794.6	ENST00000681658.1	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_4	2071.0942759807	5399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCAATGGGTGCCTGCCCC	-64092541	True	NA	NA	False	NA	NA	NA	64163026	64155739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162956
transcript_48222.known	chr15	-	893	5	FSM	ENSG00000166794.6	ENST00000300026.4	893	5	0	0	0	0	multi-exon	FALSE	canonical	3	4932	junction_4	148.211630785172	26102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAATGTGTGGGCCTGGTT	-64092537	True	NA	NA	False	AATAAA	-30	NA	64163022	64155816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64156910_64160103_64160198_64162040_64162155_64162851
transcript_48223.known	chr15	-	4064	4	FSM	ENSG00000166794.6	ENST00000561048.2	4064	4	0	0	0	0	multi-exon	FALSE	canonical	3	4932	junction_3	168.916152770144	722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTTTTTTTTTTTTAATA	-64092534	True	NA	NA	False	AATAAA	-10	NA	64163019	64155836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64156146_64156724_64160198_64162040_64162155_64162851
transcript_48224.known	chr15	-	2485	13	FSM	ENSG00000169118.18	ENST00000634654.1	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.5790673817056	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTGTCTGGTTATATTGG	-64355059	True	NA	2	True	TTTAAA	-32	NA	64356071	64171133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64171986_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_48226.known	chr15	-	8085	12	FSM	ENSG00000169118.18	ENST00000303052.13	8085	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	6.59701911146427	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGCTGAAGAAGAAAATTAT	-64355161	True	NA	NA	False	AATAAA	-20	NA	64356173	64165524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64171986_64180347_64180455_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_48232.known	chr15	-	2083	13	FSM	ENSG00000169118.18	ENST00000607537.6	2083	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.0485130479519	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCTTGTTTGGTTGGT	-64355161	True	NA	0	True	AATAAA	-22	NA	64356173	64165732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64166081_64180347_64180455_64188374_64188486_64203081_64203190_64204440_64204590_64204864_64204950_64207508_64207595_64213889_64214125_64216561_64216714_64251511_64251582_64259200_64259242_64300318_64300724_64355987
transcript_48236.known	chr15	-	690	4	FSM	ENSG00000166803.14	ENST00000560234.1	690	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	437.479396340242	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTTGTAAGACTAATTAT	-64387584	True	NA	21	True	TTTAAA	-33	NA	64387684	64365867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64387446
transcript_48241.known	chr15	-	749	3	FSM	ENSG00000166803.14	ENST00000559519.5	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	491.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTCAGTATTAATTAAACA	-64370775	True	NA	-37	True	ATTAAA	-2	NA	64381441	64365605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64376742_64376906_64381325
transcript_48243.known	chr15	-	2132	4	FSM	ENSG00000166803.14	ENST00000300035.9	2132	4	0	0	0	0	multi-exon	FALSE	canonical	3	861	junction_2	80.8125402809902	6307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATTTGTGTGCTTCCTAA	-64370775	True	NA	-18	True	AATAAA	-27	NA	64381441	64364303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64376742_64376906_64380957_64381039_64381325
transcript_48244.known	chr15	-	766	5	FSM	ENSG00000166803.14	ENST00000558008.3	766	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	480.52341254095	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTGAGATTTGCTTAGA	-64370772	True	NA	41	True	NA	NA	NA	64381438	64365733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64366076_64373697_64373765_64376742_64376906_64380957_64381039_64381325
transcript_4825.known	chr1	+	536	4	FSM	ENSG00000186973.11	ENST00000335282.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	43147890	False	NA	9	True	AATAAA	-19	NA	43147903	43156396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148085_43150760_43150821_43152827_43152932_43156205
transcript_48258.known	chr15	+	2013	13	FSM	ENSG00000103671.10	ENST00000261884.8	2013	13	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_11	14.9840192649814	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTTGACATTTTTCTTA	64385150	True	NA	19	True	TATAAA	-21	NA	64387835	64455303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64414084_64414212_64418540_64418729_64424030_64424156_64425539_64425632_64445005_64445109_64454996
transcript_48259.known	chr15	+	1536	9	FSM	ENSG00000103671.10	ENST00000560567.5	1536	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_7	42.8396355610082	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCAAAACAGTGCAAATAAAA	64385173	True	NA	NA	False	NA	NA	NA	64387858	64424330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64387965_64393945_64394116_64395397_64395532_64397605_64397819_64400742_64400822_64406329_64406460_64409612_64409829_64418540_64418729_64424030
transcript_4826.known	chr1	+	448	4	FSM	ENSG00000186973.11	ENST00000409396.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACGTGGGGCTTAGGAGATG	43147909	False	NA	NA	False	NA	NA	NA	43147922	43156279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148085_43150760_43150821_43152827_43152980_43156205
transcript_48260.known	chr15	+	348	1	FSM	ENSG00000243403.1	ENST00000483963.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	64592978	64593326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64593000_64593300
transcript_48278.known	chr15	-	541	4	FSM	ENSG00000180304.14	ENST00000559665.6	541	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1377.90283482625	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTTCTTGGGATGCAG	-64679045	True	NA	NA	False	NA	NA	NA	64703215	64690460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64690550_64691433_64691592_64693074_64693182_64703028
transcript_48281.known	chr15	-	1934	6	FSM	ENSG00000180304.14	ENST00000326005.10	1934	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_4	1205.64329716546	12553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTCTATTCTTTATTTCT	-64679111	False	NA	-21	True	AATAAA	-18	NA	64703281	64687572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_48282.known	chr15	-	1744	5	FSM	ENSG00000180304.14	ENST00000560258.6	1744	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	1546.73931223073	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTGTGTCAATAAACTGATT	-64679038	True	NA	-52	True	NA	NA	NA	64703208	64687603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64688835_64690373_64690550_64691433_64691515_64691515_64691592_64703028
transcript_48283.known	chr15	-	785	4	FSM	ENSG00000180304.14	ENST00000559753.1	785	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_3	1327.74353279874	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATGTTTATGAACTGGCA	-64679031	True	NA	-42	True	AGTAAA	-3	NA	64703201	64688484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64688835_64689083_64689170_64690373_64690550_64703028
transcript_48284.known	chr15	-	707	3	FSM	ENSG00000180304.14	ENST00000560837.5	707	3	0	0	0	0	multi-exon	FALSE	canonical	3	2989	junction_1	116.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCAAATGCCTGCCGGTTAA	-64679024	True	NA	-1	True	ATTAAA	-20	NA	64703194	64690166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64690550_64691433_64691592_64703028
transcript_48288.nnic	chr15	-	1772	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	821	0	at_least_one_novel_splicesite	FALSE	canonical	3	123	junction_7	586.591538170353	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	-64774693	False	NA	-13	True	AATAAA	-15	NA	64774768	64739891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64774655
transcript_4829.known	chr1	+	530	4	FSM	ENSG00000186973.11	ENST00000410025.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	43147903	False	NA	9	True	AATAAA	-19	NA	43147916	43156396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148092_43150760_43150821_43152827_43152932_43156205
transcript_48290.nnic	chr15	-	1717	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	-604	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	627.728200639059	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	-64776033	True	NA	-13	True	AATAAA	-15	NA	64776193	64739891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64776135
transcript_48291.nnic	chr15	-	1745	8	NNC	ENSG00000166831.9	novel	1746	8	NA	NA	-920	0	at_least_one_novel_splicesite	FALSE	canonical	3	93	junction_7	596.600095096697	233	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	-64776414	True	NA	-13	True	AATAAA	-15	NA	64776509	64739891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64776423
transcript_48293.known	chr15	-	1746	8	FSM	ENSG00000166831.9	ENST00000560606.5	1746	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	626.721824175574	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTCTCGGCCTTTGCTT	NA	False	NA	-13	True	AATAAA	-15	NA	64761217	64739891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64761130
transcript_48294.known	chr15	-	2017	8	FSM	ENSG00000166831.9	ENST00000300069.5	2017	8	0	0	0	0	multi-exon	FALSE	canonical	3	1490	junction_2	180.576853444731	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTCTCGGCCTTTGCTTC	-64760463	True	NA	-12	True	AATAAA	-16	NA	64775589	64739890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64741001_64741172_64741243_64748418_64748568_64748999_64749151_64749430_64749494_64750342_64750382_64751560_64751639_64775232
transcript_48310.nnic	chr15	-	758	2	NNC	ENSG00000140451.13	novel	1631	3	NA	NA	-1009	14	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGAGAGGCTTT	-64813086	False	NA	NA	False	NA	NA	NA	64822466	64821575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_64822133_64822265
transcript_48314.known	chr15	+	3689	6	FSM	ENSG00000241839.10	ENST00000323544.5	3689	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	7.22218803410712	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCAGTGCCTCAAGCCTGT	64840217	True	NA	26	True	AATAAA	-16	NA	64841914	64868002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64842029_64848592_64848743_64854920_64855038_64859893_64859999_64861476_64861576_64864898
transcript_48316.known	chr15	+	1477	6	FSM	ENSG00000166839.17	ENST00000496660.5	1477	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	8.18290901819151	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGGTTGTGGCCTTTCTT	64911418	True	NA	6	True	AGTAAA	-24	NA	64911917	64932514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_64911965_64921920_64922020_64926065_64926171_64926900_64927000_64930821_64930921_64931486
transcript_48318.known	chr15	-	520	1	FSM	ENSG00000274383.1	ENST00000619654.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTGCCTCACAGGACTGG	NA	False	NA	0	True	AAAACA	-27	NA	64951435	64950915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64950900_64951400
transcript_48320.known	chr15	-	1613	9	FSM	ENSG00000090487.11	ENST00000433215.6	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	294.525784100476	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGAGTCGCTTTTGTGATT	-64979439	False	10035	-6	True	AATAAA	-12	NA	64989474	64963026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989405
transcript_48321.known	chr15	-	1799	9	FSM	ENSG00000090487.11	ENST00000204566.7	1799	9	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	73.827078365597	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTTTTGTGATTATTGT	-64979879	True	NA	-1	True	AATAAA	-17	NA	64989914	64963021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64976474_64976556_64980863_64981026_64983506_64983594_64989664
transcript_48323.known	chr15	-	1533	8	FSM	ENSG00000090487.11	ENST00000416889.6	1533	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	314.799579907922	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACATTGGTTATTTTATGC	-64979876	True	NA	41	True	NA	NA	NA	64989911	64963203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_64963737_64965319_64965461_64969254_64969363_64970113_64970223_64974601_64974748_64980863_64981026_64983506_64983594_64989664
transcript_48328.known	chr15	-	2746	9	FSM	ENSG00000103707.10	ENST00000220058.9	2746	9	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	20.6424168885332	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGTGTGTGCAAACTCAT	-65026259	True	NA	-5	True	AATAAA	-13	NA	65029639	65001511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_48335.nnic	chr15	-	1021	7	NNC	ENSG00000103707.10	novel	2746	9	NA	NA	-16	68	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	96.1088792290632	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGAGATTATCTTTCC	-65026275	True	NA	-3	True	AATAAA	-22	NA	65029655	65002509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_65002693_65016452_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_48338.nic	chr15	-	1074	7	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-39	3395	-16	-2977	5prime_fragment	FALSE	canonical	3	223	junction_5	19.9450634382434	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTGTCTTATTCTTTGC	-65026275	True	NA	NA	False	NA	NA	NA	65029655	65005972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_48343.nic	chr15	-	1036	6	ISM	ENSG00000103707.10	ENST00000558460.5	1522	10	-39	13677	-16	0	5prime_fragment	FALSE	canonical	3	223	junction_4	18.6697616481839	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTATAGAGACCTTAGA	-65026275	True	NA	NA	False	TTTAAA	-1	NA	65029655	65016254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_65016528_65020196_65020273_65021513_65021617_65023671_65023795_65026830_65027041_65029404
transcript_48347.known	chr15	-	1216	4	FSM	ENSG00000103707.10	ENST00000543678.1	1216	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	120.875509880575	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTAGCTCTGTCACCC	-65026259	True	NA	NA	False	NA	NA	NA	65029639	65015832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65016528_65020196_65020273_65026830_65027041_65029404
transcript_48348.known	chr15	-	421	2	FSM	ENSG00000103707.10	ENST00000559633.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATGCTTTCTGTAATAT	-65026152	False	NA	NA	False	TATAAA	-33	NA	65029532	65026747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65027041_65029404
transcript_48349.known	chr15	-	1111	8	FSM	ENSG00000103707.10	ENST00000560717.5	1111	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	85.9166658418945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTGGACTTTTTTTTT	-65026218	True	NA	0	True	ATTAAA	-18	NA	65029598	65002995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65003257_65004853_65004937_65006112_65006192_65016435_65016528_65020196_65020273_65021513_65021617_65026817_65027041_65029404
transcript_48350.known	chr15	-	2823	5	FSM	ENSG00000090470.15	ENST00000204549.9	2823	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_4	14.9164338901763	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTGCCTTTGCTGCCAA	-65133475	True	NA	-8	True	AATAAA	-19	NA	65133808	65117378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65118841_65119375_65119464_65119717_65119955_65129031_65129171_65132911
transcript_48356.known	chr15	-	4695	14	FSM	ENSG00000166855.9	ENST00000300107.7	4695	14	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	31.171030398347	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAACGTGGTGGTGTGTCC	-65181101	True	NA	NA	False	AATAAA	-20	NA	65185342	65148218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65150914_65152429_65152537_65153546_65153640_65154781_65155082_65155691_65155857_65156843_65156933_65157745_65157911_65158574_65158752_65162603_65162646_65164028_65164189_65166630_65166786_65178933_65179052_65180043_65180205_65185074
transcript_48359.nic	chr15	-	1383	3	ISM	ENSG00000166855.9	ENST00000558958.1	1493	9	-262	21674	-262	-11709	5prime_fragment	FALSE	canonical	3	229	junction_1	11.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGCTTACTTGTGTTTAT	-65185571	True	NA	NA	False	AAGAAA	-17	NA	65185604	65178359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_65179052_65180043_65180205_65185074
transcript_4836.known	chr1	+	476	3	FSM	ENSG00000186973.11	ENST00000409337.5	476	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	43147853	False	NA	9	True	AATAAA	-19	NA	43147866	43156396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43148092_43150760_43150821_43156205
transcript_48360.nic	chr15	-	862	3	ISM	ENSG00000166855.9	ENST00000558958.1	1493	9	-80	22013	-80	-12048	5prime_fragment	FALSE	canonical	3	229	junction_1	11.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTATGGTGGTGCATACC	-65185389	False	NA	NA	False	AAAAAG	-2	NA	65185422	65178698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_65179052_65180043_65180205_65185074
transcript_48361.known	chr15	+	116	1	FSM	ENSG00000200156.1	ENST00000363286.1	116	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATATAAAGCTGTTAAAAAAT	65304364	True	NA	NA	False	NA	NA	NA	65304676	65304792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65304700_65304800
transcript_48366.nnic	chr15	+	1111	3	Antisense	novelGene_ENSG00000103742.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_2	2.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACCTGATTCCTAACTTCC	NA	False	NA	1	True	ATTAAA	-17	NA	65415339	65419569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr15_+_65415851_65416848_65416957_65419077
transcript_48370.known	chr15	-	7281	20	FSM	ENSG00000074603.19	ENST00000300141.11	7281	20	0	0	0	0	multi-exon	TRUE	canonical	3	38	junction_4	9.98974543471532	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTAAGTGTTCCTTTT	-65515412	True	NA	-3	True	AATAAA	-18	NA	65517689	65442466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65454262_65454416_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65517485
transcript_48379.nic	chr15	-	784	4	NIC	ENSG00000074603.19	novel	561	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	1.88561808316413	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	-65515438	True	NA	4	True	AATAAA	-26	NA	65517715	65511960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_65512109_65512294_65512565_65515655_65515792_65517485
transcript_48380.known	chr15	-	561	3	FSM	ENSG00000074603.19	ENST00000560194.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	18.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCTTTTGTTTTTTT	-65515351	True	NA	4	True	AATAAA	-26	NA	65517628	65511960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65512109_65512294_65512565_65517485
transcript_48381.known	chr15	-	3125	20	FSM	ENSG00000074603.19	ENST00000321147.10	3125	20	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	18.9344985530925	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGACATTAGCACCATGT	-65515427	True	NA	NA	False	ACTAAA	-14	NA	65517704	65446620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65447007_65450998_65451111_65451959_65452103_65456224_65456372_65463760_65463907_65466677_65466814_65467070_65467224_65474208_65474289_65478879_65479040_65480221_65480400_65481514_65481616_65485098_65485161_65487689_65487819_65490188_65490300_65497863_65498033_65500605_65500780_65507242_65507356_65512294_65512565_65515655_65515792_65517485
transcript_48382.known	chr15	+	1465	12	FSM	ENSG00000074696.13	ENST00000565299.5	1465	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	693.79514446221	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCCTTTTCCCCAGTAAC	65513807	True	NA	27	True	ATTAAA	-16	NA	65530489	65576499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530719_65535720_65535835_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_48384.known	chr15	+	1658	11	FSM	ENSG00000074696.13	ENST00000566074.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	627.766708260322	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAACAACATCTATTATTA	65530726	False	NA	NA	False	GGGGCT	-33	NA	65530753	65576955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530834_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_48388.known	chr15	+	3228	11	FSM	ENSG00000074696.13	ENST00000261875.10	3228	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	490.633019679679	2315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATGACTGTGCTTAAA	65513780	True	NA	20	True	ATTAAA	-17	NA	65530462	65578349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530719_65551675_65551719_65554886_65554961_65556738_65556904_65558679_65558732_65562773_65562885_65564214_65564343_65570090_65570204_65571547_65571655_65572234_65572367_65576302
transcript_48389.known	chr15	+	393	2	FSM	ENSG00000074696.13	ENST00000566239.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	1784	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGAAGGAAAAAAAAAAAAA	65513905	False	NA	NA	False	TTTAAA	-35	NA	65530587	65551937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65530719_65551675
transcript_4839.known	chr1	+	365	2	FSM	ENSG00000186973.11	ENST00000481753.1	365	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCACTTTTCTCATTTCT	43152744	False	NA	9	True	AATAAA	-19	NA	43152757	43156396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43152932_43156205
transcript_48394.known	chr15	-	2419	12	FSM	ENSG00000138614.16	ENST00000567744.5	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	79.9162785059961	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCATTTTCAAGCTTCTG	-65608221	True	NA	NA	False	NA	NA	NA	65611121	65579026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607426_65610685
transcript_48395.known	chr15	-	2615	12	FSM	ENSG00000138614.16	ENST00000573314.5	2615	12	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_11	59.7605414470919	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCTTTTGGTCTGTCTT	-65608236	True	NA	21	True	ACTAAA	-5	NA	65611136	65578752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65610795
transcript_48396.known	chr15	-	2393	12	FSM	ENSG00000138614.16	ENST00000313182.7	2304	12	-114	25	-3	-22	multi-exon	FALSE	canonical	3	114	junction_11	51.5083239682338	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGGTTTCACTATGAAA	-65608345	True	NA	-8	True	AATAAA	-17	NA	65611245	65578781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_48398.known	chr15	-	1797	12	FSM	ENSG00000138614.16	ENST00000569491.5	1797	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	122.534124105279	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGACCGGCAGGGGCTC	-65608231	True	NA	NA	False	NA	NA	NA	65611131	65579096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593570_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605233_65607301_65607426_65611097
transcript_48400.known	chr15	-	1741	11	FSM	ENSG00000138614.16	ENST00000420799.7	1741	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_10	83.7795321065951	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGCTTGAATGACTGAT	-65608342	True	NA	NA	False	NA	NA	NA	65611242	65579146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_65579660_65581953_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65611097
transcript_48406.nic	chr15	-	1683	11	ISM	ENSG00000138614.16	ENST00000313182.7	2304	12	-143	3058	15	-2567	5prime_fragment	FALSE	canonical	3	114	junction_10	50.3888876638491	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCTGTTCCTTCCCTAA	NA	False	NA	1	True	AATAAA	-15	NA	65611274	65581814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_65582020_65584769_65584889_65591597_65591732_65593427_65593573_65595732_65595826_65598320_65598464_65598871_65598991_65599773_65599930_65605128_65605237_65607158_65607443_65611097
transcript_48421.known	chr15	+	635	5	FSM	ENSG00000103769.10	ENST00000567671.1	635	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	527.16049501077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCAACCACTGAAAACAAGC	65869954	True	NA	NA	False	NA	NA	NA	65870012	65887791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65870086_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_48426.known	chr15	+	4895	5	FSM	ENSG00000103769.10	ENST00000261890.7	4895	5	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	74.7039992236025	6648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGTGTTTAATTTTTA	65851072	True	NA	30	True	AATATA	-29	NA	65869490	65891989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879670_65879752_65887700
transcript_48427.known	chr15	+	711	5	FSM	ENSG00000103769.10	ENST00000565075.5	711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	537.29158750161	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGGCTGTGTATAGTCCA	65851072	True	NA	-38	True	NA	NA	NA	65869490	65887859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_65869626_65877331_65877528_65877761_65877956_65879724_65879752_65887700
transcript_48430.known	chr15	+	3780	17	FSM	ENSG00000166938.13	ENST00000319212.9	3780	17	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_15	11.5650335062204	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCGTCTCCAATCAGTTCT	66289629	True	NA	23	True	AATAAA	-18	NA	66293567	66333898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830_66326365_66328969_66329125_66329220_66329400_66331874_66332021_66332735_66332911_66333003
transcript_48434.known	chr15	+	2399	12	FSM	ENSG00000166938.13	ENST00000564909.5	2399	12	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	9.49728103761482	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTGTTCCTTGGTTTTT	66289657	True	NA	NA	False	AAAACA	-16	NA	66293595	66326561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448_66318619_66320570_66320733_66322686_66322935_66323492_66323586_66325830
transcript_48438.nic	chr15	+	1343	8	ISM	ENSG00000166938.13	ENST00000565281.5	2305	12	50	7700	-17	3677	5prime_fragment	FALSE	canonical	3	181	junction_2	9.28021815366384	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAAGATACTGGGATGTG	66293537	True	NA	NA	False	AATAAA	-20	NA	66293550	66318751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_66293736_66294987_66295142_66306823_66306953_66308708_66308845_66311723_66311901_66314038_66314118_66315035_66315216_66318448
transcript_48452.known	chr15	-	729	2	FSM	ENSG00000075131.10	ENST00000561773.1	729	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGATGTAATAAAAGACC	-66386473	True	NA	NA	False	NA	NA	NA	66386707	66379269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66379941_66386649
transcript_48455.known	chr15	-	1728	8	FSM	ENSG00000075131.10	ENST00000261881.9	1728	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_7	14.5377762665241	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACAGGCTTTATGGGAGG	-66352306	True	NA	-2	True	AGTAAA	-18	NA	66356685	66336190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66337182_66341149_66341357_66349059_66349124_66349314_66349438_66351524_66351601_66352128_66352208_66352814_66352956_66356638
transcript_48456.nnic	chr15	+	2116	11	FSM	ENSG00000169032.11	ENST00000692683.1	2350	11	122	112	-16	0	multi-exon	FALSE	canonical	2	8	junction_1	160.384070281309	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGCTTTTGTGGTAAGC	66401794	True	NA	18	True	AATAAA	-36	NA	66401862	66491544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66401948_66435026_66435238_66436745_66436893_66443279_66443358_66444655_66444708_66481754_66481880_66484989_66485192_66487227_66487293_66489214_66489277_66489717_66489764_66490501
transcript_48459.nnic	chr15	-	1245	3	NIC	ENSG00000174446.13	novel	920	4	NA	NA	2	387	intron_retention	FALSE	canonical	3	37	junction_1	5.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTCTCTCTGCGGGGTT	-66497749	False	150775	-4	True	AATAAA	-26	NA	66497778	66489747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_66490718_66494414_66494553_66497641
transcript_48466.known	chr15	-	1069	3	FSM	ENSG00000174446.13	ENST00000565465.1	1069	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	175.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATAAATTTATAAGTA	-66497730	False	150775	-30	True	NA	NA	NA	66497759	66493843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66495329_66495420_66497489
transcript_48467.known	chr15	-	574	2	FSM	ENSG00000174446.13	ENST00000566658.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTAGCATTGAGTAATA	-66497709	False	150775	-92	True	NA	NA	NA	66497738	66494227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66497489
transcript_48468.known	chr15	-	794	2	FSM	ENSG00000174446.13	ENST00000307979.7	794	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCACTTGAGACATCACT	-66497733	False	150775	-66	True	TATAAA	-24	NA	66497762	66493879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66497641
transcript_48469.known	chr15	-	1296	3	FSM	ENSG00000174446.13	ENST00000316634.6	1296	3	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_2	0.5	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCAGGCTGCTCTCGAACT	-66497733	False	150775	NA	False	AGTAAA	-20	NA	66497762	66493467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66494553_66495329_66495420_66497641
transcript_48471.known	chr15	+	3256	19	FSM	ENSG00000174442.12	ENST00000446801.6	3256	19	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	100.247548536881	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATGTGTTGGCATTTCTTG	NA	False	NA	92	True	AATAAA	-24	NA	66505116	66549487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66508745_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_48473.known	chr15	+	2206	18	FSM	ENSG00000174442.12	ENST00000535141.6	2206	18	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	132.327971500823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAGAAAAGGGAGGAAGAT	NA	False	NA	NA	False	AAAACA	-22	NA	66504958	66548426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_48478.known	chr15	-	2552	12	FSM	ENSG00000188501.11	ENST00000537670.5	2552	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	8.69691690407374	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTCATGCATTTTTCTCA	-66565685	True	NA	NA	False	GATAAA	-16	NA	66565964	66547467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66548606_66550040_66550105_66551661_66551862_66552042_66552170_66552983_66553259_66557721_66557884_66557981_66558037_66561005_66561102_66561186_66561316_66563515_66563626_66563910_66563999_66565856
transcript_48513.known	chr15	-	2741	10	FSM	ENSG00000174444.15	ENST00000307961.11	2741	10	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_7	826.499550013694	44914	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCTTCAGGTTCTTTAC	-66354080	True	NA	NA	False	ATTAAA	-17	NA	66504855	66498014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501106_66501374_66501505_66501787_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_48514.known	chr15	-	817	5	FSM	ENSG00000174444.15	ENST00000566622.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	3	9516	junction_2	983.600020333469	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTATTGCAGAGATTCTA	-66354058	True	NA	NA	False	ATTAAA	-9	NA	66504833	66501559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66501913_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_48515.known	chr15	-	2003	8	FSM	ENSG00000174444.15	ENST00000567229.5	2003	8	0	0	0	0	multi-exon	FALSE	canonical	3	9698	junction_7	725.998172820549	25919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGACTTGGTGTGCTCTGT	-66354071	True	NA	-23	True	AATAAA	-27	NA	66504846	66499319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66499653_66500055_66500177_66500292_66500377_66500948_66501505_66501787_66501913_66502611_66503165_66503357_66503530_66504787
transcript_48516.known	chr15	+	3595	19	FSM	ENSG00000174442.12	ENST00000307897.10	3595	19	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_1	52.7546440527827	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTCTTAGACTAATTTT	66501583	True	NA	7	True	AATAAA	-19	NA	66505325	66550130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_66505392_66508840_66508893_66513987_66514084_66515525_66515645_66518878_66519079_66520589_66520661_66521049_66521206_66523676_66523749_66527289_66527384_66527856_66527913_66528851_66528958_66529493_66529574_66532246_66532404_66532984_66533014_66535932_66536070_66537167_66537264_66540097_66540211_66546590_66546706_66548350
transcript_48517.known	chr15	-	565	5	FSM	ENSG00000174444.15	ENST00000569438.2	565	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4382.46015384053	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTCAATGAGCACATTTAC	-66354070	True	NA	NA	False	AAAAAG	-4	NA	66504845	66501784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_66501874_66502611_66502751_66503057_66503165_66503357_66503530_66504787
transcript_48518.known	chr15	+	1147	7	FSM	ENSG00000166949.17	ENST00000537194.6	1147	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	34.2608458091092	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGCAAGAAATGGCGTCT	67166008	False	NA	NA	False	NA	NA	NA	67166018	67190762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67166194_67166778_67166854_67170553_67170605_67181240_67181454_67184726_67184865_67187364_67187510_67190412
transcript_48521.known	chr15	+	1822	7	FSM	ENSG00000103599.20	ENST00000629425.2	1822	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.62995563967658	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGATTTGTTTGCT	67254676	True	NA	NA	False	NA	NA	NA	67254847	67374168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67254948_67261271_67261395_67344062_67344192_67357344_67357422_67359846_67359886_67372110_67372663_67373366
transcript_48532.known	chr15	-	2251	10	FSM	ENSG00000103591.13	ENST00000561452.5	2251	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	112.289088989861	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTACTGCAAATAAAAATCC	-67250106	True	NA	-53	True	TTTAAA	-13	NA	67254675	67201706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254413
transcript_48533.known	chr15	-	3132	10	FSM	ENSG00000103591.13	ENST00000261880.10	3132	10	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_5	32.0061722442468	720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGACTTGGTTTTTGGTTGT	-67250092	True	NA	NA	False	TTTAAA	-5	NA	67254661	67200666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_67202899_67203547_67203598_67204043_67204149_67208561_67208659_67209461_67209545_67231813_67231898_67235978_67236069_67236407_67236505_67236629_67236821_67254558
transcript_48554.nnic	chr15	-	655	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	-54	3466	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	13.5	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	NA	False	NA	-2	True	AATAAA	-18	NA	67521898	67514919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_67515067_67518999_67519103_67521493
transcript_48555.nnic	chr15	-	653	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	-77	3466	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	9	101	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	NA	False	NA	-2	True	AATAAA	-18	NA	67521921	67514919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_67515067_67518999_67519103_67521518
transcript_48556.nnic	chr15	-	571	3	NNC	ENSG00000259673.6	novel	740	2	NA	NA	-22	3466	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	8.5	137	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTTCTACAGGTAGTACT	NA	False	NA	-2	True	AATAAA	-18	NA	67521866	67514919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_67515067_67518999_67519103_67521545
transcript_48563.known	chr15	+	4193	2	FSM	ENSG00000189227.6	ENST00000342683.6	4193	2	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTGCAATGATTGAGG	67520181	True	NA	NA	False	AATAAA	-16	NA	67521130	67530146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67521595_67526417
transcript_48565.nnic	chr15	+	1631	22	NNC	ENSG00000137764.20	novel	1506	18	NA	NA	-959	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	13.6416728481238	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	NA	False	NA	24	True	AATAAA	-21	NA	67541743	67807114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_67541799_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_48566.known	chr15	+	2344	22	FSM	ENSG00000137764.20	ENST00000178640.10	2344	22	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	8.48474688515901	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67542686	False	NA	24	True	AATAAA	-21	NA	67542702	67807114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_48567.known	chr15	+	1783	22	FSM	ENSG00000137764.20	ENST00000354498.9	1783	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.9928715249851	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCCTCTGCCATAAGAGT	67546991	False	NA	21	True	AATAAA	-18	NA	67548997	67807111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67549208_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_48569.known	chr15	+	1689	21	FSM	ENSG00000137764.20	ENST00000395476.6	1689	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	14.3996527735915	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCATAAGAGTTGTGTG	67541324	False	NA	27	True	AATAAA	-24	NA	67543330	67807117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_67543471_67550033_67550083_67563282_67563351_67580753_67580824_67585889_67585931_67586845_67586914_67592925_67592975_67600684_67600750_67630887_67630928_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_4857.nnic	chr1	-	1239	10	NNC	ENSG00000117395.13	novel	1352	9	NA	NA	-20718	0	intron_retention	FALSE	canonical	0	0	junction_9	433.521355220361	631	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTTCAATAAACTAAAG	NA	False	NA	-43	True	NA	NA	NA	43193288	43164345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172285_43193233
transcript_48572.nnic	chr15	+	1493	14	NNC	ENSG00000137764.20	novel	412	3	NA	NA	-3693	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	15.4414335416918	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCTGCCATAAGAGTTGT	67636837	True	NA	24	True	AATAAA	-21	NA	67636859	67807114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_67637227_67646230_67646300_67646387_67646470_67658552_67658615_67664596_67664646_67692478_67692553_67693517_67693569_67703336_67703409_67727915_67727946_67748230_67748258_67748568_67748602_67769601_67769664_67772706_67772753_67806645
transcript_48578.known	chr15	+	7980	14	FSM	ENSG00000033800.14	ENST00000249636.11	7980	14	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.547568485785	156	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTGAAATCATCTATTAT	68049188	True	NA	NA	False	AATAAA	-39	NA	68054314	68193847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_68054351_68086305_68086751_68141945_68142031_68142289_68142338_68145815_68145907_68146565_68146701_68153589_68153696_68164730_68164805_68173731_68173893_68175636_68175768_68176473_68176655_68181211_68181355_68183629_68183668_68187541
transcript_48585.known	chr15	-	2228	7	FSM	ENSG00000128973.13	ENST00000249806.11	2228	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.5715195861619	280	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGTTAGAGGTGTTTTT	-68220627	True	NA	-15	True	AGTAAA	-18	NA	68229728	68206991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68208411_68209636_68209760_68211262_68211319_68211674_68211864_68214289_68214389_68218535_68218651_68229501
transcript_48588.known	chr15	-	2520	4	FSM	ENSG00000129007.16	ENST00000448060.7	2520	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	54.2176682969266	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTTTTCTATGTCTATA	-68205454	False	NA	-3	True	AATAAA	-18	NA	68205488	68192056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68205120_68205152_68205244
transcript_48589.known	chr15	-	3238	4	FSM	ENSG00000260007.3	ENST00000637054.1	3238	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	43.7137151119519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTATACAAACTGACAT	-68220576	True	NA	NA	False	AATAAA	-15	NA	68229677	68191354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68218535_68218651_68229501
transcript_48591.known	chr15	-	3651	3	FSM	ENSG00000129007.16	ENST00000540479.6	3651	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	62	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATAGCTATTTTATCA	-68205264	False	NA	NA	False	ATTAAA	-20	NA	68205298	68190704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68205244
transcript_48592.known	chr15	-	3389	3	FSM	ENSG00000260007.3	ENST00000562767.2	3389	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	37	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCTAAGCTTTGTATTTA	-68220617	True	NA	-109	True	NA	NA	NA	68229718	68191129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439_68197629_68229501
transcript_48593.known	chr15	-	620	2	FSM	ENSG00000129007.16	ENST00000467188.1	620	2	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTACCGTGAGTCCGGCCC	-68197737	False	NA	-10	True	AATAAA	-21	NA	68197750	68193803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68194113_68197439
transcript_48597.known	chr15	-	1084	7	FSM	ENSG00000140350.15	ENST00000267918.9	1084	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1081.29280904336	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTATTTCCCAAGTCT	-68777135	False	113	NA	False	NA	NA	NA	68817599	68779742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68817549
transcript_48601.known	chr15	-	2440	7	FSM	ENSG00000140350.15	ENST00000465139.6	2440	7	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_4	227.622250425763	2237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGGTTTACATATGGT	-68780431	True	NA	-11	True	TATAAA	-18	NA	68820895	68778534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_68780143_68780409_68780474_68782955_68783054_68784396_68784596_68787412_68787536_68787769_68787920_68820697
transcript_48606.known	chr15	+	5044	5	FSM	ENSG00000138604.10	ENST00000261858.7	5044	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	4.03112887414927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCTGGATATTTCTCTT	69159324	True	NA	NA	False	AATAAA	-20	NA	69160634	69272207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69160758_69210315_69210407_69255793_69256393_69261086_69261330_69268219
transcript_48608.known	chr15	+	1308	3	FSM	ENSG00000138604.10	ENST00000559798.2	1308	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTATAATATAATGATTTA	69159273	True	NA	2	True	AATAAA	-16	NA	69160583	69197458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69160758_69194435_69194526_69196414
transcript_48610.nnic	chr15	+	1207	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-41	-52	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGTTTC	69159232	True	NA	8	True	AATAAA	-26	NA	69160542	69197406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_69160758_69196414
transcript_48611.nnic	chr15	+	1260	2	NIC	ENSG00000138604.10	novel	1308	3	NA	NA	-41	1	combination_of_known_splicesites	FALSE	canonical	3	42	junction_1	0	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTATAATATAATGATTTAA	69159232	True	NA	3	True	AATAAA	-17	NA	69160542	69197459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_69160758_69196414
transcript_48613.known	chr15	+	5372	9	FSM	ENSG00000137819.14	ENST00000395407.7	5372	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	9.37333318515884	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAATGGCCACTGTCCTAGG	69297725	True	NA	NA	False	AGTAAA	-34	NA	69298911	69407780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69299057_69337340_69337502_69359965_69360132_69379882_69380011_69384676_69384883_69389653_69389781_69397467_69397565_69399973_69400116_69403580
transcript_48627.known	chr15	+	3660	24	FSM	ENSG00000137807.16	ENST00000679126.1	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	118.954122147168	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410088	True	NA	105	True	ATTAAA	-21	NA	69414348	69448425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69425281_69425324_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48628.known	chr15	+	3620	23	FSM	ENSG00000137807.16	ENST00000647715.1	3620	23	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_17	76.3948664494854	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	69410088	True	NA	107	True	ATTAAA	-23	NA	69414348	69448427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48629.known	chr15	+	3351	22	FSM	ENSG00000137807.16	ENST00000352331.8	3351	22	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_17	63.8825452830171	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTTGTGTGATGGCTGT	69410043	True	NA	105	True	ATTAAA	-21	NA	69414303	69448425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48637.known	chr15	+	3723	23	FSM	ENSG00000137807.16	ENST00000260363.9	3723	23	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_17	76.3948664494854	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTGATGGCTGTTC	NA	False	NA	107	True	ATTAAA	-23	NA	69414245	69448427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69414477_69415993_69416064_69417382_69417512_69421646_69421753_69421991_69422129_69422325_69422436_69423158_69423330_69426069_69426183_69426335_69426458_69429110_69429214_69435482_69435563_69435651_69435772_69436137_69436262_69436563_69436723_69438247_69438406_69439903_69440078_69440307_69440488_69440767_69441080_69444789_69445042_69446008_69446092_69446282_69446365_69446870_69446942_69447791
transcript_48639.known	chr15	-	505	2	FSM	ENSG00000259426.6	ENST00000558107.1	505	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAAAAGCTTATGGTCTG	-69414150	True	NA	NA	False	NA	NA	NA	69414220	69403844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_69404281_69414151
transcript_48646.known	chr15	+	1174	4	FSM	ENSG00000137818.12	ENST00000260379.11	1174	4	0	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_3	1482.43365974858	221282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACATGCCAGGCACATGAA	69276386	True	NA	68	True	AATAAA	-31	NA	69452817	69456205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69453646_69453722_69455169_69455288_69455427
transcript_48696.known	chr15	+	256	2	FSM	ENSG00000137818.12	ENST00000560274.1	256	2	0	0	0	0	multi-exon	FALSE	canonical	1	42	junction_1	0	1347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	69276452	True	NA	32	True	AATAAA	-14	NA	69452883	69455546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69455427
transcript_48697.known	chr15	+	445	3	FSM	ENSG00000137818.12	ENST00000357790.5	445	3	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	10246	12131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGTTGGTCTTGTCCATA	69276382	True	NA	33	True	AATAAA	-15	NA	69452813	69455547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69455169_69455288_69455427
transcript_48698.known	chr15	+	1962	3	FSM	ENSG00000137818.12	ENST00000487304.6	1962	3	0	0	0	0	multi-exon	FALSE	canonical	3	21541	junction_2	1403	4908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTTGGTCTTGTCCAT	69276387	True	NA	32	True	AATAAA	-14	NA	69452818	69455546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_69453021_69453646_69455288_69455427
transcript_48701.nnic	chr15	-	666	3	Intergenic	novelGene_13	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	2	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCCCTCCCATAATTTCAA	-69462772	True	NA	NA	False	AATAAA	-16	NA	69462797	69460464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr15_-_69460711_69462011_69462316_69462681
transcript_48703.known	chr15	-	6904	19	FSM	ENSG00000137831.15	ENST00000322954.11	6904	19	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	28.4602820492171	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTTAAATCTTTAATATT	-70760897	True	NA	NA	False	AATAAA	-22	NA	70763558	70654553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70657128_70660150_70660217_70664661_70664815_70666723_70669463_70671038_70671092_70671964_70672002_70676492_70676592_70677107_70677141_70678098_70678207_70679607_70679677_70682757_70682796_70684264_70684447_70687539_70687647_70687749_70687821_70690453_70690512_70691298_70691364_70695016_70695106_70699526_70699661_70763329
transcript_48707.known	chr15	+	6176	16	FSM	ENSG00000137821.12	ENST00000260382.10	6176	16	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	9.22942155404239	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATAGTGTACTTGCGG	70892172	True	NA	NA	False	AATAAA	-22	NA	70892825	71053658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_70892943_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531_70911599_70919049_70919194_70936760_70936823_70963784_70963933_70980100_70980185_70984093_70984258_71008378_71008617_71009806_71009993_71012803_71012914_71037178_71037333_71049408
transcript_48710.known	chr15	+	602	6	FSM	ENSG00000137821.12	ENST00000558546.5	602	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	21.8778426724392	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAATCAGGTATTGTAAAG	70853323	True	NA	NA	False	AAAAAG	-23	NA	70853377	70911589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_70853470_70893583_70893641_70895848_70895937_70900921_70901025_70904551_70904756_70911531
transcript_48712.nnic	chr15	+	999	3	NNC	ENSG00000137821.12	novel	557	3	NA	NA	3	-25801	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCATCCCTAAAGTTCCAT	70853326	True	NA	NA	False	AATAAA	-12	NA	70853380	70875150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_70853470_70872907_70873224_70874556
transcript_48713.nic	chr15	+	598	3	ISM	ENSG00000137821.12	ENST00000560755.5	398	5	-250	4909	3	-4907	5prime_fragment	FALSE	canonical	3	50	junction_2	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCATTGGGACCAAATT	70892547	True	NA	NA	False	AATAAA	-19	NA	70892597	70896044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_70892943_70893583_70893641_70895848
transcript_48715.known	chr15	-	4467	3	FSM	ENSG00000166173.11	ENST00000299213.10	4467	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	4	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTATGGGCCAGGCAT	-70851797	True	NA	NA	False	AATAAA	-17	NA	70854157	70829129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70833117_70836294_70836506_70853888
transcript_48716.known	chr15	-	527	2	FSM	ENSG00000166173.11	ENST00000344870.4	527	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTATTGATCATCTCCCCA	-70851761	True	NA	3	True	AATAAA	-36	NA	70854121	70851426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70851721_70853888
transcript_48717.known	chr15	-	2047	3	FSM	ENSG00000129028.9	ENST00000249861.9	2047	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGAGCCTGAACAATGA	-70891962	True	NA	-15	True	AATAAA	-18	NA	70892433	70881341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70882651_70882760_70882909_70891843
transcript_48718.known	chr15	-	537	3	FSM	ENSG00000129028.9	ENST00000560604.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCAACACAATGAAGATAAT	-70891939	True	NA	NA	False	NA	NA	NA	70892410	70882299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_70882651_70882760_70882909_70892372
transcript_48723.known	chr15	-	555	1	FSM	ENSG00000212664.5	ENST00000498103.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	71341712	71341157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_71341200_71341700
transcript_48724.known	chr15	+	703	3	FSM	ENSG00000166192.15	ENST00000564082.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTAGCAGAGAAACTGGAGG	72117724	True	NA	NA	False	NA	NA	NA	72118324	72140015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72118465_72139311_72139436_72139576
transcript_48725.known	chr15	+	4178	2	FSM	ENSG00000166192.15	ENST00000340912.6	4178	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGCCTCCATCTCGTCTC	72117802	True	NA	NA	False	AATAAA	-17	NA	72118402	72143692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72118465_72139576
transcript_48733.known	chr15	-	2305	11	FSM	ENSG00000067225.20	ENST00000335181.10	2305	11	0	0	0	0	multi-exon	FALSE	canonical	1	2003	junction_4	2785.53535429009	11688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCCTCTCTTTTCTGCT	-72176175	True	NA	-4	True	AATAAA	-17	NA	72231190	72199028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72199757_72200473_72200656_72202453_72202621_72206727_72206881_72207126_72207278_72208620_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_48734.known	chr15	-	1355	9	FSM	ENSG00000067225.20	ENST00000569857.5	1355	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4154.6761888714	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCACCGCCGTGGGTGCC	-72176210	True	NA	NA	False	NA	NA	NA	72231225	72202532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72202621_72206727_72206881_72207126_72207278_72208616_72208892_72209672_72209860_72210346_72210479_72217408_72217501_72218943_72219111_72231115
transcript_48739.known	chr15	-	836	5	FSM	ENSG00000137817.17	ENST00000569972.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_4	16.7481342244442	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCTGTGGACTGGATATG	NA	False	NA	-23	True	AATAAA	-15	NA	72250265	72241196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72241558_72241900_72241986_72242156_72242221_72242619_72242700_72250019
transcript_48740.known	chr15	-	1743	13	FSM	ENSG00000213614.11	ENST00000567411.5	1743	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_10	73.3637720919226	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTGGCATTTTTCTATAAT	-72374361	True	NA	-52	True	AATAAA	-6	NA	72376003	72343907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72344141_72345445_72345551_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72355558_72355625_72356524_72356618_72375719
transcript_48741.known	chr15	-	1892	15	FSM	ENSG00000213614.11	ENST00000683681.1	1892	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	92.1510793673706	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAATGTGGCATTTTTCTA	-72374367	True	NA	-56	True	AATAAA	-2	NA	72376009	72343911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72344141_72345445_72345551_72345676_72345777_72346234_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48742.known	chr15	-	1000	2	FSM	ENSG00000213614.11	ENST00000567213.2	1000	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGAGATGCCTTTCCT	-72374347	True	NA	NA	False	AATAAA	-23	NA	72375989	72369958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72370689_72375719
transcript_48743.known	chr15	-	2451	12	FSM	ENSG00000213614.11	ENST00000684520.1	2451	12	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_3	32.1882376750902	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAACAACTATTTACAT	-72374367	True	NA	-12	True	AATAAA	-7	NA	72376009	72345241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72346326_72346526_72346711_72347685_72347759_72348047_72348135_72349078_72349260_72350517_72350651_72351132_72351235_72353067_72353179_72353690_72353738_72355558_72355625_72356524_72356618_72375719
transcript_48744.known	chr15	-	513	3	FSM	ENSG00000259783.6	ENST00000565305.6	513	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCCACTTGTTTCTTCTG	NA	False	NA	NA	False	AAGAAA	-27	NA	72636956	72608480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_72608754_72633337_72633407_72636785
transcript_48745.nic	chr15	+	184	2	ISM	ENSG00000215186.7	ENST00000421285.4	5380	18	0	13029	0	-3601	5prime_fragment	FALSE	canonical	2	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAACTGACAGTAGCC	NA	False	NA	NA	False	NA	NA	NA	72654696	72656570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_72654822_72656511
transcript_48746.known	chr15	+	1876	17	FSM	ENSG00000140463.14	ENST00000567279.5	1876	17	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	136.950022248081	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGAACTGGCAGCAAGGCT	72682395	True	NA	NA	False	NA	NA	NA	72686206	72737824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72686252_72695176_72695229_72704423_72704482_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48750.known	chr15	+	2467	16	FSM	ENSG00000140463.14	ENST00000268057.9	2467	16	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	33.623007995518	413	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	72682395	True	NA	12	True	AATAAA	-17	NA	72686206	72738473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48753.known	chr15	+	1864	16	FSM	ENSG00000140463.14	ENST00000562084.5	1864	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	104.386376292865	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAGAGAGAAATAAGAA	72682408	True	NA	NA	False	NA	NA	NA	72686219	72737570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_72686565_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615_72729685_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48755.nic	chr15	+	2426	15	NIC	ENSG00000140463.14	novel	2467	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_9	107.112400433053	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCACGGTCTTCCCTTAC	72682367	True	NA	12	True	AATAAA	-17	NA	72686178	72738473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72731304_72731458_72731554_72731727_72735112_72735183_72735824_72735967_72736761_72736964_72737477
transcript_48761.nic	chr15	+	915	10	ISM	ENSG00000140463.14	ENST00000268057.9	2467	16	-28	8634	0	-1619	5prime_fragment	FALSE	canonical	3	311	junction_1	42.0654986044324	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGTCAAGTATGCTCTAC	72682367	True	NA	NA	False	AATAAA	-24	NA	72686178	72729839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_72686252_72695176_72695229_72709699_72709780_72712243_72712308_72715290_72715403_72716777_72716851_72722793_72722848_72724527_72724656_72727939_72727995_72729615
transcript_48767.known	chr15	+	833	5	FSM	ENSG00000183324.11	ENST00000560581.1	833	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.29903810567666	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACCTTTTATCAATGTT	NA	False	NA	NA	False	AATAAA	-12	NA	73443163	73560010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73443345_73473831_73473922_73550937_73551151_73556301_73556392_73559751
transcript_48768.known	chr15	-	2420	9	FSM	ENSG00000156642.17	ENST00000345330.9	2420	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	540.487916146143	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGATAATACTCTTTATT	-73632288	True	NA	-16	True	AATAAA	-17	NA	73633389	73560013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73587523_73587619_73591965_73592138_73597021_73597370_73633124
transcript_48772.known	chr15	-	858	6	FSM	ENSG00000156642.17	ENST00000565325.5	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	485.939255463067	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGTTAAAATATTTAAAT	-73631972	True	NA	NA	False	NA	NA	NA	73633245	73560816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73561049_73561895_73561971_73563235_73563258_73570149_73570424_73573661_73573796_73633124
transcript_48774.known	chr15	+	3295	10	FSM	ENSG00000103855.18	ENST00000318443.10	3295	10	0	0	0	0	multi-exon	TRUE	canonical	3	582	junction_1	140.856901381035	178	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTCTCTGTGAAGTGT	73680244	True	NA	16	True	AATAAA	-15	NA	73684382	73714514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73684461_73699585_73699719_73702254_73702594_73702771_73703087_73703658_73703998_73704175_73704473_73708338_73708474_73709647_73709690_73711134_73711171_73712933
transcript_48781.nnic	chr15	+	1380	4	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.24721912892465	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	73752128	True	NA	36	True	NA	NA	NA	73752287	73770489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_73752397_73767788_73767882_73768752_73768911_73769469
transcript_48782.nnic	chr15	+	1503	4	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-29	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.24721912892465	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAGGTGTTTTATTGCTA	73752128	True	NA	NA	False	ACTAAA	-15	NA	73752287	73770612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_73752397_73767788_73767882_73768752_73768911_73769469
transcript_48792.nnic	chr15	+	1286	3	NNC	ENSG00000260469.3	novel	1224	2	NA	NA	-28	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGTTTCCTTTTGTGT	73752129	True	NA	36	True	NA	NA	NA	73752288	73770489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_73752397_73768752_73768911_73769469
transcript_48794.known	chr15	-	779	3	FSM	ENSG00000205363.7	ENST00000559817.1	779	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	11.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACGGGAGAGGGTGCGGTT	-73752338	False	NA	NA	False	NA	NA	NA	73752378	73740255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73740643_73750974_73751098_73752109
transcript_48795.known	chr15	-	7150	3	FSM	ENSG00000205363.7	ENST00000569673.3	7150	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	5.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACGAGCCCCATTTGCAG	-73753253	True	NA	-33	True	AATAAA	-16	NA	73753351	73735457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73740643_73750974_73751698_73752109
transcript_48796.known	chr15	+	1224	2	FSM	ENSG00000260469.3	ENST00000615095.1	1224	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	73752157	True	NA	NA	False	ACTAAA	-16	NA	73752316	73770613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73752397_73769469
transcript_48798.nnic	chr15	+	1218	2	NIC	ENSG00000260469.3	novel	1193	3	NA	NA	-160	-27	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGACAATTTCTCCTCCT	73767870	True	NA	9	True	GATAAA	-23	NA	73767961	73770462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_73768187_73769469
transcript_48799.nnic	chr15	+	1369	2	NIC	ENSG00000260469.3	novel	1193	3	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAGGTGTTTTATTGCTAA	73767870	True	NA	NA	False	ACTAAA	-16	NA	73767961	73770613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_73768187_73769469
transcript_48800.known	chr15	+	2346	7	FSM	ENSG00000129038.16	ENST00000261921.8	2346	7	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_1	8.34665601703261	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGGCTCTGCATGCGG	73925640	True	NA	6	True	AATAAA	-15	NA	73926461	73952136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73927886_73942853_73942963_73946416_73946555_73947066_73947224_73947806_73947903_73949458_73949575_73951830
transcript_48802.known	chr15	-	765	4	FSM	ENSG00000261801.7	ENST00000568229.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.18993502999218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACATTTGACAGCCCCACA	-73925176	False	31	NA	False	NA	NA	NA	73926331	73908195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73908549_73912184_73912304_73919837_73920039_73926239
transcript_48803.nic	chr15	-	958	4	FSM	ENSG00000261801.7	ENST00000685373.1	984	4	38	-12	4	0	multi-exon	FALSE	canonical	3	7	junction_1	31.3723161756065	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTTGTACATCTCAATAAA	-73926781	True	NA	-3	True	AATAAA	-32	NA	73927936	73908070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73908549_73912184_73912304_73919837_73920039_73927776
transcript_48806.nic	chr15	-	603	3	NIC	ENSG00000261801.7	novel	701	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTTTTGGGGTAATTTG	-73925176	False	31	-1	True	AATAAA	-18	NA	73926331	73916137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_73916448_73919837_73920039_73926239
transcript_48807.nic	chr15	-	671	3	FSM	ENSG00000261801.7	ENST00000688623.1	701	3	30	0	4	0	multi-exon	FALSE	canonical	3	20	junction_1	27.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTTTTGGGGTAATTTG	-73926781	True	NA	-1	True	AATAAA	-18	NA	73927936	73916137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73916448_73919837_73920039_73927776
transcript_48809.known	chr15	-	1833	7	FSM	ENSG00000067221.14	ENST00000561656.5	1833	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	9.94428926011753	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGTGTTTACAATGTATA	NA	False	NA	NA	False	AATAAA	-1	NA	73994622	73983236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73994550
transcript_48810.known	chr15	-	6280	7	FSM	ENSG00000067221.14	ENST00000541638.6	6280	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	5.19615242270663	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAGTCTTTGTTTGGACA	-73992064	True	NA	NA	False	AATAAA	-20	NA	73992295	73978925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_48812.known	chr15	-	1849	6	FSM	ENSG00000067221.14	ENST00000564777.5	1849	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.35948716543807	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCGGGGCTCCTGGGG	-73992066	True	NA	NA	False	AATAAA	-32	NA	73992297	73983205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984869_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_48814.known	chr15	-	1891	6	FSM	ENSG00000067221.14	ENST00000316911.10	1891	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	7.19444229944198	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAGAAGAAGCCAAGCG	-73992281	False	NA	NA	False	AATAAA	-20	NA	73992348	73983217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_73984131_73984658_73984872_73985317_73985514_73988598_73988803_73990350_73990458_73992090
transcript_48816.nnic	chr15	-	845	5	NNC	ENSG00000067221.14	novel	539	5	NA	NA	12	645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAACTTGTGCTTCCTCTT	-73992105	True	NA	NA	False	AATAAA	-34	NA	73992336	73988008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_73988147_73988598_73988803_73989107_73989258_73990350_73990458_73992090
transcript_48820.known	chr15	+	3010	8	FSM	ENSG00000140464.20	ENST00000436891.7	3010	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_6	48.0917490483618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGCGAACCCTTATTCC	73992612	True	NA	26	True	AATAAA	-18	NA	73994743	74036394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74035171
transcript_48821.known	chr15	+	2148	8	FSM	ENSG00000140464.20	ENST00000569965.5	2148	8	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_6	44.757851893522	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992601	True	NA	4	True	AATAAA	-14	NA	73994732	74043338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74032571_74032716_74033155_74033423_74034477_74034531_74042988
transcript_48822.known	chr15	+	1985	7	FSM	ENSG00000140464.20	ENST00000564428.5	1985	7	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	35.485912697858	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTGCCTGAGTGTGCGA	73992612	True	NA	4	True	AATAAA	-14	NA	73994743	74043338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_73994942_73998003_73998477_74022827_74023409_74024856_74024928_74033155_74033415_74034477_74034531_74042988
transcript_48823.known	chr15	-	3176	18	FSM	ENSG00000159289.6	ENST00000290438.3	3176	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.10124365876374	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAGGTATTTAGTGAA	NA	False	NA	NA	False	NA	NA	NA	74082550	74069856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74071038_74071123_74071278_74071366_74071471_74071553_74071657_74072217_74072310_74072741_74072818_74074147_74074217_74074492_74075002_74075402_74075491_74075682_74075791_74075898_74075986_74077017_74077125_74077220_74077303_74077402_74077454_74077714_74077754_74078608_74078690_74080615_74080736_74082425
transcript_48824.known	chr15	-	2139	3	FSM	ENSG00000248540.3	ENST00000668929.1	2139	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGACTCTGTCTCAAAAAAA	-74129134	False	NA	NA	False	NA	NA	NA	74129146	74126385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74127734_74128015_74128625_74128964
transcript_48826.known	chr15	-	1260	2	FSM	ENSG00000248540.3	ENST00000659491.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTAGGGCCCAAGCCTG	-74129329	False	NA	NA	False	NA	NA	NA	74129341	74127741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74128625_74128964
transcript_48828.known	chr15	+	2331	2	FSM	ENSG00000129009.13	ENST00000249842.8	2331	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCGTGTCTGCCTGGAAT	NA	False	NA	3	True	AATAAA	-17	NA	74173709	74176871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74174020_74174850
transcript_48834.known	chr15	+	1346	5	FSM	ENSG00000140481.15	ENST00000560148.5	1346	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	4.96865172858795	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	NA	False	NA	6	True	AATAAA	-18	NA	74202704	74221557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74218496_74218862_74221249
transcript_48836.known	chr15	+	820	4	FSM	ENSG00000140481.15	ENST00000561332.1	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_3	5.71547606649408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGCCGAGTCGGGTGTAT	74202612	True	NA	43	True	NA	NA	NA	74203049	74212973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74212481
transcript_48840.nnic	chr15	+	713	4	NNC	ENSG00000140481.15	novel	820	4	NA	NA	-34	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	7.11805216802087	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGGCCGAGTCGGG	74202538	True	NA	38	True	NA	NA	NA	74202975	74212968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74203099_74209387_74209535_74212145_74212278_74212657
transcript_48841.known	chr15	+	589	4	FSM	ENSG00000140481.15	ENST00000558645.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.11805216802087	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGGGTCCTTGTTCTGA	74202572	True	NA	NA	False	CATAAA	-21	NA	74203009	74213488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74203099_74209387_74209535_74212145_74212278_74213267
transcript_48843.nnic	chr15	+	1022	4	NNC	ENSG00000140481.15	novel	1346	5	NA	NA	-33	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.59966329107444	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	74202539	True	NA	6	True	AATAAA	-18	NA	74202976	74221557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74203099_74209387_74209535_74218416_74218862_74221249
transcript_48847.nnic	chr15	+	955	4	NIC	ENSG00000140481.15	novel	1346	5	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	5.73488351136175	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	74202526	True	NA	6	True	AATAAA	-18	NA	74202963	74221557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_74203099_74209387_74209535_74218496_74218862_74221249
transcript_48851.nnic	chr15	+	773	3	NIC	ENSG00000140481.15	novel	1346	5	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCGCTTCTCCAGTCCCC	74202561	True	NA	6	True	AATAAA	-18	NA	74202998	74221557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_74203099_74218496_74218862_74221249
transcript_48852.known	chr15	-	2708	19	FSM	ENSG00000137868.19	ENST00000395105.9	2708	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	15.6115065193103	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCCTCATAGCGGGAGGG	-74201877	True	NA	-5	True	AATAAA	-16	NA	74202787	74179465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74180244_74180781_74180938_74181294_74181459_74182160_74182263_74182342_74182461_74183855_74183990_74184979_74185056_74189114_74189278_74190839_74190902_74191166_74191244_74191423_74191492_74193799_74193923_74195301_74195469_74195651_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_48853.nic	chr15	-	1866	6	NIC	ENSG00000137868.19	novel	1889	6	NA	NA	-10	0	intron_retention	FALSE	canonical	3	78	junction_5	18.3019124683734	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	-74202856	False	NA	NA	False	AATAAA	-20	NA	74202868	74194386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74202712
transcript_48854.known	chr15	-	1889	6	FSM	ENSG00000137868.19	ENST00000432245.6	1889	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	43.1712867540452	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAATGAATGAGTATACAAA	-74208786	True	NA	NA	False	AATAAA	-20	NA	74208978	74194386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74195676_74196007_74196148_74197337_74197424_74197751_74197819_74202154_74202283_74208799
transcript_48860.known	chr15	-	612	2	FSM	ENSG00000277749.1	ENST00000611006.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTTAAACTGCATGT	-74319612	True	NA	-16	True	AATAAA	-15	NA	74319688	74311515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74311959_74319519
transcript_48862.nic	chr15	-	1568	9	NIC	ENSG00000140459.18	novel	1837	9	NA	NA	20	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_8	8.87411967464942	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCTTGCGTTCCATCA	-74359568	False	64	-15	True	AATAAA	-14	NA	74359583	74337761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74359522
transcript_48864.known	chr15	-	2001	9	FSM	ENSG00000140459.18	ENST00000358632.8	2001	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	6.48074069840786	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGCGTTCCATCAGAC	-74366193	False	NA	-12	True	AATAAA	-17	NA	74366206	74337758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74338104_74338570_74338769_74339236_74339316_74339586_74339754_74342976_74343138_74343788_74343993_74345043_74345244_74347899_74348056_74365715
transcript_48868.nnic	chr15	+	1333	4	NNC	ENSG00000260266.1	novel	915	4	NA	NA	-102	197	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.71547606649408	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTATAACCAATGCTTG	NA	False	NA	NA	False	AATAAA	-21	NA	74350665	74362238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74350940_74354525_74354686_74356282_74356457_74361513
transcript_48869.known	chr15	+	915	4	FSM	ENSG00000260266.1	ENST00000564109.1	915	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1.24721912892465	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGAGTGGTGGATGGCAA	74350653	True	NA	NA	False	AATACA	-33	NA	74350767	74361903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74350940_74354525_74354686_74356282_74356476_74361513
transcript_48872.known	chr15	+	3337	2	FSM	ENSG00000260266.1	ENST00000562009.1	3337	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTGTGCATTTTGTC	74354416	True	NA	8	True	AATAAA	-20	NA	74354455	74364620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74354686_74361513
transcript_48878.known	chr15	-	1477	12	FSM	ENSG00000138629.16	ENST00000564488.5	1477	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_11	226.742654577736	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTTTGTCCAGTTCTTG	-74453753	True	NA	-4	True	AATATA	-17	NA	74461118	74445977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667_74460779_74461036
transcript_48884.known	chr15	-	1720	11	FSM	ENSG00000138629.16	ENST00000567435.5	1720	11	0	0	0	0	multi-exon	TRUE	canonical	3	73	junction_10	168.281341805917	629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453737	True	NA	-3	True	AATATA	-18	NA	74461102	74445976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74460667
transcript_48887.known	chr15	-	1409	11	FSM	ENSG00000138629.16	ENST00000395081.7	1409	11	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_10	114.592495391278	1590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453795	True	NA	-3	True	AATATA	-18	NA	74461160	74445976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461036
transcript_48888.known	chr15	-	1360	11	FSM	ENSG00000138629.16	ENST00000361351.8	1360	11	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_10	114.882766331596	1540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	-74453817	True	NA	-3	True	AATATA	-18	NA	74461182	74445976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461107
transcript_48889.nnic	chr15	-	1410	11	NNC	ENSG00000138629.16	novel	1360	11	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_10	177.745576597563	732	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTTTGTCCAGTTCTTGA	NA	False	NA	-3	True	AATATA	-18	NA	74461282	74445976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_74446228_74448477_74448601_74449185_74449354_74449625_74449676_74449935_74450070_74450801_74450860_74451435_74451521_74452295_74452379_74456551_74456672_74458683_74458897_74461157
transcript_48952.known	chr15	+	1333	4	FSM	ENSG00000247240.9	ENST00000499217.6	1333	4	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	19.258475767539	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGTCATTTTCATCCATTC	74459819	True	NA	23	True	AATAAA	-32	NA	74461264	74481302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462032_74466035_74466131_74479059_74479279_74481050
transcript_48955.known	chr15	+	1344	4	FSM	ENSG00000247240.9	ENST00000666989.2	1391	4	42	5	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.20144916122817	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	74459861	True	NA	9	True	AATAAA	-18	NA	74461306	74481288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74481050
transcript_48959.known	chr15	+	1310	4	FSM	ENSG00000247240.9	ENST00000670462.1	1310	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	25.9358182185692	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCAGGTACTTGGGAGGC	74459964	False	NA	NA	False	AATACA	-34	NA	74461409	74513636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462099_74466035_74466131_74479059_74479279_74513329
transcript_48961.known	chr15	+	1296	4	FSM	ENSG00000247240.9	ENST00000657781.2	1347	4	31	20	14	-5	multi-exon	FALSE	canonical	3	17	junction_1	19.258475767539	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAACATGTTTCCCTGTCA	74459833	True	NA	4	True	AATAAA	-13	NA	74461278	74481283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462028_74466035_74466131_74479059_74479279_74481050
transcript_48973.nnic	chr15	+	1249	3	FSM	ENSG00000247240.9	ENST00000693152.1	1189	3	-66	6	-8	0	multi-exon	FALSE	canonical	2	7	junction_1	18.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	NA	False	NA	9	True	AATAAA	-18	NA	74461239	74481288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462032_74479059_74479279_74481050
transcript_48976.known	chr15	+	3083	3	FSM	ENSG00000247240.9	ENST00000664892.1	3083	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	9.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACACCACAGCAAGACCACCA	74459852	True	NA	-33	True	NA	NA	NA	74461297	74481246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462099_74466035_74466131_74479059
transcript_48980.known	chr15	+	1251	3	FSM	ENSG00000247240.9	ENST00000659591.2	1300	3	45	4	0	-1	multi-exon	FALSE	canonical	3	13	junction_1	15.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCCCTGTCATGGTCAT	74459861	True	NA	11	True	AATAAA	-20	NA	74461306	74481290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74462099_74479059_74479279_74481050
transcript_48986.nnic	chr15	+	807	2	NNC	ENSG00000247240.9	novel	1187	3	NA	NA	0	-3	intron_retention	FALSE	canonical	0	0	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGTTTCCCTGTCATG	74459852	True	NA	6	True	AATAAA	-15	NA	74461297	74481285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74462028_74481208
transcript_48987.known	chr15	+	376	2	FSM	ENSG00000247240.9	ENST00000568853.1	376	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTTCCCTGTCATGGTC	74459898	True	NA	9	True	AATAAA	-18	NA	74461343	74481288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74461636_74481204
transcript_48988.known	chr15	-	240	2	FSM	ENSG00000260103.2	ENST00000568772.2	240	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAATGTTTGCATTAAAAT	-74481346	False	NA	NA	False	NA	NA	NA	74481398	74481024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74481131_74481264
transcript_48989.known	chr15	+	4228	9	FSM	ENSG00000179361.18	ENST00000346246.10	4228	9	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_7	94.8429623113913	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGTCTCTCTCAGTTGCT	74525248	True	NA	31	True	AATAAA	-20	NA	74541219	74598131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74589819_74590004_74591150_74591435_74591559_74591815_74593137_74593237_74595610
transcript_4899.known	chr1	-	1352	9	FSM	ENSG00000117395.13	ENST00000236051.3	1352	9	0	0	0	0	multi-exon	FALSE	canonical	3	1286	junction_6	62.2670659337663	3265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTTCTCATTTCCTTTGT	-43157459	True	NA	-7	True	GATAAA	-16	NA	43172290	43164183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052
transcript_48991.nnic	chr15	+	1016	5	NNC	ENSG00000179361.18	novel	4243	9	NA	NA	-2	821	at_least_one_novel_splicesite	FALSE	canonical	1	23	junction_4	493.713669549467	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGTTGACTTTGGGATG	74525246	True	NA	NA	False	AATAAA	-17	NA	74541217	74575838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_74541331_74543859_74544489_74572861_74572934_74573131_74573205_74575709
transcript_48993.known	chr15	+	1854	13	FSM	ENSG00000179335.20	ENST00000395066.9	1854	13	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	38.2784933814741	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	74611610	True	NA	19	True	AATAAA	-19	NA	74615835	74630201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74615899_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_48995.nic	chr15	+	1765	13	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	75.3008779644847	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCTGGTACCAGTGTGT	74611665	True	NA	15	True	AATAAA	-19	NA	74615890	74630116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_74615950_74619196_74619349_74620008_74620226_74622119_74622217_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_49.known	ERCC-00096	+	1091	1	FSM	ERCC-00096A	DQ459429	1091	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	128629	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00096_+_0_1100
transcript_4900.known	chr1	-	1503	10	FSM	ENSG00000117395.13	ENST00000431635.6	1503	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	430.719151715269	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTTGTCTCATCCTT	-43172530	True	NA	2	True	GATAAA	-25	NA	43172570	43164174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43164494_43164642_43164806_43166825_43166920_43167159_43167236_43168938_43169029_43170755_43170880_43171478_43171652_43171885_43171970_43172052_43172142_43172279
transcript_49000.nic	chr15	+	1776	12	NIC	ENSG00000179335.20	novel	1854	13	NA	NA	-19	0	combination_of_known_junctions	TRUE	canonical	3	47	junction_3	73.1641424164679	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGTGGAGAGCTAAGTGT	74611591	True	NA	19	True	AATAAA	-19	NA	74615816	74630201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_74615899_74619196_74619349_74620008_74620226_74622493_74622561_74624901_74625019_74625801_74625969_74627351_74627447_74627538_74627669_74627969_74628053_74628603_74628684_74628941_74629033_74629706
transcript_4901.known	chr1	-	300	3	FSM	ENSG00000117395.13	ENST00000466927.5	300	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTAAGAACTTTGCGCTT	-43261718	False	NA	NA	False	AATAAA	-23	NA	43261910	43181681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43181785_43215265_43215394_43261841
transcript_49012.known	chr15	-	3810	9	FSM	ENSG00000179151.13	ENST00000647659.1	3810	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	134.591743803251	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAATGACTGACTGAGTC	-74689080	True	NA	-18	True	AATAAA	-1	NA	74695936	74630574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74687090_74687180_74695879
transcript_49013.known	chr15	-	1825	8	FSM	ENSG00000179151.13	ENST00000568176.5	1825	8	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	119.282378054286	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	-74689144	True	NA	-39	True	NA	NA	NA	74696000	74632541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74687090_74687180_74695879
transcript_49015.nic	chr15	-	1853	8	NIC	ENSG00000179151.13	novel	2093	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_7	130.771025936519	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCATGGACCTTGTTAAA	-74689179	True	NA	-39	True	NA	NA	NA	74696035	74632541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
transcript_49017.known	chr15	-	3744	7	FSM	ENSG00000179151.13	ENST00000315127.9	3744	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_6	47.2605073560955	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGTGCCGTGTGACTTG	-74689168	True	NA	-1	True	AATAAA	-18	NA	74696024	74630557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74632947_74635408_74635627_74640465_74640620_74655732_74656069_74671454_74671775_74674960_74675143_74695879
transcript_4902.known	chr1	+	1850	4	FSM	ENSG00000179178.11	ENST00000432792.6	1850	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.9893611000735	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	NA	False	NA	28	True	AATAAA	-29	NA	43270024	43274002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43270086_43270585_43270794_43272183_43272340_43272577
transcript_49025.nic	chr15	-	1092	3	ISM	ENSG00000179151.13	ENST00000315127.9	3744	7	-19	40471	-14	516	5prime_fragment	FALSE	canonical	3	215	junction_2	58.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAAATCCTGTTACTGATG	-74689187	True	NA	NA	False	AAAAAG	-14	NA	74696043	74671028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_74671775_74674960_74675143_74695879
transcript_49026.known	chr15	+	958	1	FSM	ENSG00000179335.20	ENST00000568232.1	958	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGTACCAGTGTGTCC	74629145	False	NA	17	True	AATAAA	-21	NA	74629160	74630118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74629200_74630100
transcript_49027.known	chr15	-	967	5	FSM	ENSG00000179151.13	ENST00000563009.5	967	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	137.179398963547	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCATTGTCTATCGACG	-74689131	True	NA	NA	False	AATGAA	-43	NA	74695987	74655793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74656069_74671454_74671775_74674960_74675143_74676940_74677023_74695879
transcript_49028.known	chr15	+	2743	13	FSM	ENSG00000103653.17	ENST00000220003.14	2743	13	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	14.7843291660085	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTTGTCCTGCCCGGT	74777581	True	NA	46	True	NA	NA	NA	74782079	74803197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74782721_74798232_74798313_74798614_74798729_74798825_74798939_74799271_74799492_74800411_74800506_74800680_74800747_74800822_74800923_74801011_74801103_74801521_74801596_74801694_74801891_74801996_74802084_74802330
transcript_49029.known	chr15	-	1633	16	FSM	ENSG00000140474.14	ENST00000566631.5	1633	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_14	58.4155991343256	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTACTCGGTGGTTACTG	-74840911	True	NA	NA	False	NA	NA	NA	74843141	74836972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842119_74842279_74842421_74843003
transcript_4903.nnic	chr1	+	671	3	NNC	ENSG00000179178.11	novel	1850	4	NA	NA	-298	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_2	77	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGGATCTCACCTCAGA	43269507	True	NA	28	True	AATAAA	-29	NA	43270647	43274002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43270794_43272183_43272340_43273633
transcript_49030.known	chr15	-	2580	16	FSM	ENSG00000140474.14	ENST00000440863.7	2580	16	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_11	31.4851640547664	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74840926	True	NA	-3	True	ATTAAA	-13	NA	74843156	74836117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_49032.known	chr15	-	2951	15	FSM	ENSG00000140474.14	ENST00000570276.5	2951	15	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_4	18.7067869381949	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCGCGTCTCTTCTTGCC	-74843336	False	NA	-3	True	ATTAAA	-13	NA	74843346	74836117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74843003
transcript_49034.known	chr15	-	2674	17	FSM	ENSG00000140474.14	ENST00000647587.1	2674	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_15	70.2138474590305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTATTTTCTCTATTTGCG	-74840894	True	NA	-17	True	NA	NA	NA	74843124	74836131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74837245_74837368_74837436_74837750_74837799_74838151_74838193_74838265_74838345_74838439_74838505_74838642_74838746_74839009_74839051_74839267_74839374_74839557_74839714_74840233_74840317_74840497_74840642_74841404_74841510_74842074_74842196_74842279_74842421_74842534_74842675_74843003
transcript_49035.known	chr15	-	2453	9	FSM	ENSG00000140497.16	ENST00000268099.13	2453	9	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_2	22.2145082097264	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGGTCCACATGTCTGGT	-74870971	True	NA	-5	True	AATAAA	-16	NA	74873365	74843729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848702_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_49036.known	chr15	-	858	9	FSM	ENSG00000140497.16	ENST00000569904.5	858	9	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_3	146.330479993062	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCGACGGACAGGGGCCAG	-74870908	True	NA	NA	False	NA	NA	NA	74873302	74845205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74845218_74845472_74845594_74848599_74848646_74850513_74850674_74851352_74851482_74852068_74852187_74854020_74854120_74854580_74854650_74873198
transcript_49048.known	chr15	+	5793	8	FSM	ENSG00000178802.18	ENST00000352410.9	5793	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	31.0154668459701	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCCTCCATTCAACA	74885720	True	NA	3	True	AATAAA	-14	NA	74890041	74902219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_49052.known	chr15	+	1707	8	FSM	ENSG00000178802.18	ENST00000563786.5	1707	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	63.7930326948654	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACCCAGCATTAGCTCAG	74885720	True	NA	NA	False	NA	NA	NA	74890041	74898044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890437_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_49062.known	chr15	+	2809	7	FSM	ENSG00000178802.18	ENST00000566377.5	2809	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	58.9170792064765	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTCTGCTAAAGGGAACCCA	74885717	True	NA	6	True	AATAAA	-19	NA	74890038	74899441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897511
transcript_49064.known	chr15	+	1619	7	FSM	ENSG00000178802.18	ENST00000323744.10	1619	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	66.7599347579736	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGGGTAATGAGCACT	74885720	True	NA	15	True	ATTAAA	-17	NA	74890041	74898228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74896151_74896326_74897010_74897220_74897511
transcript_49065.known	chr15	+	1523	7	FSM	ENSG00000178802.18	ENST00000535694.5	1523	7	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	57.9417811255401	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAGACCAGGTAATTTCTA	74885720	True	NA	NA	False	NA	NA	NA	74890041	74898077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74891378_74891580_74892660_74892803_74893137_74893321_74896151_74896326_74897010_74897220_74897511
transcript_49072.known	chr15	-	865	7	FSM	ENSG00000178761.15	ENST00000563671.5	865	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	77.2521125205576	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGAGCTGTGTCTGTGTTG	-74902914	True	NA	-11	True	AATAAA	-14	NA	74906793	74899991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74900138_74901949_74902064_74902603_74902787_74904663_74904713_74905153_74905232_74906277_74906366_74906586
transcript_49073.known	chr15	+	1481	6	FSM	ENSG00000178802.18	ENST00000563422.5	1481	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	30.2892720282281	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCTCAGGTTAGGAGGC	74885720	True	NA	NA	False	AATACA	-39	NA	74890041	74896930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137_74893321_74896151
transcript_4908.known	chr1	-	1486	3	FSM	ENSG00000253313.6	ENST00000523677.6	1486	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCACTCATTTTTATTT	-43284346	True	NA	-26	True	AATAAA	-30	NA	43285581	43281876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43283108_43283251_43283369_43285443
transcript_49085.known	chr15	-	568	6	FSM	ENSG00000178761.15	ENST00000564019.1	568	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.989544833463	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCTCATCCCCCCTAAGC	-74902928	True	NA	NA	False	NA	NA	NA	74906807	74902709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74902784_74904663_74904713_74904981_74905040_74905153_74905232_74906277_74906366_74906586
transcript_49087.known	chr15	+	1148	5	FSM	ENSG00000178802.18	ENST00000565576.5	1148	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	33.8045854877707	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGGGTGTGGTCACTG	74885740	True	NA	8	True	NA	NA	NA	74890061	74893786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74890090_74890526_74890655_74891378_74891580_74892660_74892803_74893137
transcript_4909.known	chr1	-	629	3	FSM	ENSG00000253313.6	ENST00000423420.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	35.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAACCCCACTTCCCTGA	-43284382	True	NA	NA	False	GGGGCT	-21	NA	43285617	43282660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43283108_43283251_43283369_43285552
transcript_49097.known	chr15	-	742	4	FSM	ENSG00000178761.15	ENST00000563877.5	742	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.5875805055086	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCCCATCTGGGCTGTGG	-74906873	True	NA	NA	False	NA	NA	NA	74906883	74902468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74902787_74904663_74904713_74905153_74905232_74906586
transcript_49098.known	chr15	-	208	2	FSM	ENSG00000178761.15	ENST00000564723.1	208	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGAGCTGTGTCTGTGTT	-74900561	False	NA	-12	True	AATAAA	-13	NA	74900571	74899992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74900138_74900508
transcript_49104.known	chr15	-	582	5	FSM	ENSG00000178741.12	ENST00000568517.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1809.41634236015	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACTTTAATAAAAGGGAA	-74937733	False	NA	-42	True	NA	NA	NA	74937776	74920311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937687
transcript_49105.known	chr15	-	1173	5	FSM	ENSG00000178741.12	ENST00000322347.11	1173	5	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_1	125.680895525135	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCTTGTCTTAGAAGCG	-74896930	True	NA	33	True	ATTAAA	-18	NA	74938073	74919790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74929115_74929233_74937914
transcript_49111.known	chr15	-	579	4	FSM	ENSG00000178741.12	ENST00000567270.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	1784.79024600154	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896937	True	NA	-5	True	AATAAA	-24	NA	74938080	74920274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74923647_74923771_74926765_74926888_74937914
transcript_49112.nnic	chr15	-	517	4	NIC	ENSG00000178741.12	novel	1173	5	NA	NA	43	0	combination_of_known_splicesites	FALSE	canonical	3	387	junction_2	1794.50742235547	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896880	True	NA	-5	True	AATAAA	-24	NA	74938023	74920274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_74920443_74923647_74923771_74929115_74929233_74937914
transcript_49113.known	chr15	-	571	4	FSM	ENSG00000178741.12	ENST00000568783.5	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	2017.40146392994	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATTAGGTATTTGTTTC	-74896940	True	NA	-10	True	AATAAA	-19	NA	74938083	74920279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74926765_74926888_74929115_74929233_74937914
transcript_49115.known	chr15	-	441	3	FSM	ENSG00000178741.12	ENST00000562233.5	441	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2145.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGGTATTTGTTTCATGTG	-74896927	True	NA	-5	True	AATAAA	-24	NA	74938070	74920274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74920443_74929115_74929233_74937914
transcript_49116.known	chr15	-	2355	1	FSM	ENSG00000178718.7	ENST00000322177.6	2355	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	66	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATACGTTCTGTGGCTGACT	-74950239	True	NA	-3	True	AATAAA	-18	NA	74956772	74954417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_74954400_74956800
transcript_49117.known	chr15	+	3379	7	FSM	ENSG00000198794.12	ENST00000425597.8	3379	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	39.1269301973291	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGCTGTGTCATGTGT	74990543	True	NA	16	True	AATAAA	-21	NA	74995562	75021495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75016592_75016750_75017869_75017972_75018417_75018536_75018788
transcript_49118.known	chr15	+	1206	6	FSM	ENSG00000198794.12	ENST00000562765.5	1206	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	34.5519898124551	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGAGGGTGGGTACAGGCC	74990553	True	NA	NA	False	NA	NA	NA	74995572	75019489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74995674_75011791_75011847_75012676_75012806_75017869_75017972_75018417_75018536_75018788
transcript_49119.known	chr15	+	593	3	FSM	ENSG00000198794.12	ENST00000567535.5	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCACTGGAGTAACTT	74990564	True	NA	NA	False	NA	NA	NA	74995583	75013124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_74995674_75011791_75011847_75012676
transcript_49123.known	chr15	+	464	5	FSM	ENSG00000138621.12	ENST00000569562.5	464	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	77.3252061102976	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGACAAAGTGAAAGAAGTC	75020539	True	NA	NA	False	NA	NA	NA	75023589	75049182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_4913.nnic	chr1	-	787	4	NNC	ENSG00000234694.2	novel	679	3	NA	NA	-41	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.4142135623731	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	-43356916	False	1801	1	True	NA	NA	NA	43358717	43354683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43355007_43357802_43357901_43358041_43358109_43358418
transcript_49130.known	chr15	+	2215	6	FSM	ENSG00000138621.12	ENST00000342932.8	2215	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	70.612746724653	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATCAAGAACCAACTTCTT	75020539	True	NA	10	True	AATAAA	-18	NA	75023589	75050726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75023627_75028246_75028454_75043440_75043537_75044385_75044515_75048552_75048722_75049149
transcript_49131.known	chr15	+	4425	3	FSM	ENSG00000167173.19	ENST00000394987.5	4425	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	4.5	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGGGCCTGTCCGTGTGTT	75196262	True	NA	28	True	ATTAAA	-22	NA	75201881	75212169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75202060_75205998_75208825_75210748
transcript_49132.nic	chr15	+	191	2	ISM	ENSG00000167195.8	ENST00000300576.6	5603	18	224	13017	224	-13017	5prime_fragment	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGACAGTAGCCCTGAGAC	NA	False	NA	NA	False	AAAAAG	-7	NA	75258557	75260438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_75258683_75260372
transcript_49133.known	chr15	+	2123	18	FSM	ENSG00000140478.16	ENST00000434739.4	3178	18	0	1055	0	-1055	multi-exon	FALSE	canonical	0	0	junction_5	1.81115344921655	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCACCCAGGCTTGCCCAG	NA	False	NA	NA	False	NA	NA	NA	75282834	75294475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75282960_75284649_75284770_75286692_75286774_75287628_75287668_75287928_75287980_75288079_75288162_75288257_75288365_75289396_75289484_75289591_75289700_75289891_75289980_75290380_75290890_75291165_75291235_75292564_75292641_75293072_75293165_75293728_75293832_75293914_75294019_75294107_75294262_75294347
transcript_4915.nnic	chr1	-	528	4	NNC	ENSG00000234694.2	novel	679	3	NA	NA	-164	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	1.69967317119759	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	-43357039	False	NA	1	True	NA	NA	NA	43358840	43354683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43355007_43357802_43357901_43358041_43358109_43358800
transcript_49167.known	chr15	+	746	6	FSM	ENSG00000140365.16	ENST00000562789.5	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	373.500950467332	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	75327237	True	NA	13	True	AATAAA	-15	NA	75336098	75340271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336231_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_49172.known	chr15	+	895	8	FSM	ENSG00000140365.16	ENST00000267935.13	895	8	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_1	177.035797141109	4220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327201	True	NA	15	True	AATAAA	-17	NA	75336062	75340273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_49173.known	chr15	+	722	7	FSM	ENSG00000140365.16	ENST00000338995.10	722	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	302.505096375802	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGCAGGGGGTTCTGTT	75327197	True	NA	15	True	AATAAA	-17	NA	75336058	75340273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339964
transcript_49174.known	chr15	+	677	6	FSM	ENSG00000140365.16	ENST00000567195.5	677	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_5	314.598410676214	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTGCAGGGGGTTCT	75327158	True	NA	12	True	AATAAA	-14	NA	75336019	75340270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75338984_75339105_75339964
transcript_49175.known	chr15	+	850	8	FSM	ENSG00000140365.16	ENST00000562610.5	850	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	294.605651330585	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGTGTGCAGGGGGTTCTG	75327192	True	NA	13	True	AATAAA	-15	NA	75336053	75340271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75336093_75338061_75338134_75338354_75338421_75338645_75338686_75339036_75339105_75339263_75339345_75339701_75339879_75339964
transcript_49176.known	chr15	+	867	6	FSM	ENSG00000140365.16	ENST00000569245.5	867	6	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	39.5454169278818	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAAGTATAAAGGAATGT	75338218	False	NA	-2	True	NA	NA	NA	75338263	75340256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75338421_75338645_75338686_75338984_75339105_75339263_75339345_75339701_75339879_75339964
transcript_49177.known	chr15	+	1897	3	FSM	ENSG00000140365.16	ENST00000563220.1	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_1	44.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGCAGGGGGTTC	75338016	True	NA	11	True	AATAAA	-13	NA	75338061	75340269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75338421_75338645_75339879_75339964
transcript_4918.known	chr1	-	661	3	FSM	ENSG00000234694.2	ENST00000424948.2	679	3	18	0	18	0	multi-exon	FALSE	canonical	1	1	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGTGTGTCATCTATTT	-43356857	False	NA	1	True	NA	NA	NA	43358658	43354683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43355007_43357802_43357901_43358418
transcript_49183.known	chr15	-	5050	21	FSM	ENSG00000169375.16	ENST00000360439.8	5050	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_20	72.0558117017635	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATAAACTCTCAACCCACG	-75453283	True	NA	41	True	AATAAA	-23	NA	75455783	75370932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75455634
transcript_49186.known	chr15	+	3711	10	FSM	ENSG00000140398.14	ENST00000355059.9	3711	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.2832392301142	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCGAATGATCATGAGTATCA	75346935	True	NA	NA	False	AATAAA	-18	NA	75347038	75357115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75347474_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_49187.known	chr15	+	1797	10	FSM	ENSG00000140398.14	ENST00000569035.5	1797	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	12.3087843770011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	75347303	True	NA	15	True	AATAAA	-15	NA	75347637	75355247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75348027_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_49188.nic	chr15	+	1784	10	NIC	ENSG00000140398.14	novel	1797	10	NA	NA	5	0	intron_retention	FALSE	canonical	1	3	junction_1	12.8793067829708	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTGGCACCTCTTGGTC	75347289	True	NA	15	True	AATAAA	-15	NA	75347623	75355247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_75348000_75348883_75349340_75352110_75352231_75352323_75352388_75352601_75352702_75353738_75353867_75354249_75354278_75354430_75354493_75354652_75354819_75354963
transcript_4920.nnic	chr1	-	661	3	NNC	ENSG00000234694.2	novel	679	3	NA	NA	-41	-2922	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTACATACATTATCGAGT	-43356916	False	1801	NA	False	NA	NA	NA	43358717	43357605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_43357901_43358041_43358109_43358418
transcript_49202.known	chr15	-	554	4	FSM	ENSG00000169375.16	ENST00000570115.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	138.362647496433	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCAGCTCTTTTTCTTGG	-75453340	True	NA	NA	False	NA	NA	NA	75455840	75422642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75422824_75430186_75430409_75436345_75436444_75455787
transcript_49203.known	chr15	-	4078	3	FSM	ENSG00000169375.16	ENST00000567289.5	4078	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	51.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAATTGTCATGATATTT	-75449164	False	2500	NA	False	ATTAAA	-20	NA	75451664	75419209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75422824_75430186_75430409_75451422
transcript_49204.nic	chr15	-	841	3	ISM	ENSG00000169375.16	ENST00000360439.8	5050	21	-6	51427	-6	283	5prime_fragment	FALSE	canonical	3	38	junction_2	133.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGGCTGCTTCCTTTT	-75453289	True	NA	1	True	AATAAA	-13	NA	75455789	75422359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_75422824_75430186_75430409_75455634
transcript_49206.known	chr15	-	455	2	FSM	ENSG00000169375.16	ENST00000568919.1	455	2	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAATAACTGTGT	-75449037	False	2500	NA	False	ATTAAA	-23	NA	75451537	75430068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75430409_75451422
transcript_49207.known	chr15	+	1430	1	FSM	ENSG00000260274.1	ENST00000563278.1	1430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTAGGTAAAACTTACTC	75367981	True	NA	NA	False	AATAAA	-23	NA	75368154	75369584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75368200_75369600
transcript_49208.known	chr15	-	984	1	FSM	ENSG00000276744.1	ENST00000617588.1	984	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTTGTCTCACTGTGTG	-75451447	False	NA	-2	True	AATAAA	-24	NA	75453947	75452963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75453000_75453900
transcript_49209.known	chr15	-	3261	26	FSM	ENSG00000140400.18	ENST00000267978.10	3261	26	0	0	0	0	multi-exon	FALSE	canonical	1	83	junction_2	32.1711920823584	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365408	True	NA	0	True	AATAAA	-16	NA	75368607	75355791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75362641_75362749_75363998_75364189_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_49210.known	chr15	-	6723	21	FSM	ENSG00000169375.16	ENST00000394947.8	6723	21	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_20	50.4325291850409	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTGTATTTTTTTTTGT	-75449190	False	2500	-9	True	ATTAAA	-14	NA	75451690	75369378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75372210_75375664_75375873_75380628_75380724_75381612_75381706_75384263_75384438_75389651_75389822_75392241_75392816_75394679_75394864_75396257_75396497_75400039_75400157_75400729_75400941_75401851_75401971_75407054_75407145_75409835_75409992_75410133_75410287_75411491_75411744_75412762_75413046_75414204_75414312_75422646_75422824_75430186_75430409_75451422
transcript_49211.known	chr15	-	2961	24	FSM	ENSG00000140400.18	ENST00000563622.5	2961	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_19	43.5459907239294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTCAGTCCCCTT	-75365405	True	NA	0	True	AATAAA	-16	NA	75368604	75355791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75356033_75356109_75356220_75356300_75356450_75356605_75356686_75356792_75356903_75358200_75358345_75358461_75358619_75358703_75358809_75359058_75359154_75359327_75359426_75359619_75359776_75359902_75359989_75360089_75360212_75360564_75360689_75361045_75361192_75361285_75361382_75361603_75361721_75361854_75361948_75362342_75362454_75364487_75364666_75366521_75366593_75367510_75367635_75368072_75368199_75368482
transcript_49212.known	chr15	-	7839	13	FSM	ENSG00000169410.11	ENST00000618819.5	7839	13	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_4	23.6800138419629	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGTGGAAGTCTGGAGTC	-75579169	False	NA	-2	True	AATAAA	-20	NA	75579315	75463250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75468984_75469791_75470000_75470679_75470831_75473688_75473768_75479847_75479915_75490207_75490302_75505674_75506004_75508916_75509028_75517258_75517365_75523120_75523246_75524208_75524299_75527117_75527262_75578713
transcript_49216.known	chr15	-	1641	10	FSM	ENSG00000169371.14	ENST00000567134.5	1641	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	157.182444909266	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTTGTGGTTCTTAAGC	-75622493	True	NA	NA	False	AATATA	-20	NA	75625794	75598082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75622341_75622491_75625665
transcript_49217.known	chr15	-	1931	10	FSM	ENSG00000169371.14	ENST00000564644.5	1931	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	164.21515546365	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGAACTGGTTTGTGGTTC	-75622387	True	NA	NA	False	AATATA	-14	NA	75625688	75598088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75624714_75624936_75625335
transcript_4922.known	chr1	+	1649	11	FSM	ENSG00000117399.14	ENST00000310955.11	1649	11	0	0	0	0	multi-exon	TRUE	canonical	3	1559	junction_1	274.030381527304	4632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	43346072	True	NA	63	True	AATAAA	-32	NA	43358980	43363203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43359007_43359166_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_49225.known	chr15	-	1682	9	FSM	ENSG00000169371.14	ENST00000564675.5	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_8	110.929031366906	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATCCACAATGTAAATATA	-75622392	True	NA	NA	False	NA	NA	NA	75625693	75598121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625335
transcript_49226.known	chr15	-	1420	9	FSM	ENSG00000169371.14	ENST00000308588.10	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_8	72.3911898990478	1275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGGTTTGTGGTTCTTA	-75622424	True	NA	NA	False	AATATA	-17	NA	75625725	75598085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75598682_75601137_75601219_75605149_75605228_75607215_75607314_75609557_75609652_75609889_75609995_75617407_75617553_75620893_75621057_75625665
transcript_49227.known	chr15	-	1132	1	FSM	ENSG00000177971.9	ENST00000403490.3	1132	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2869	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAATCTGTCTGGTTT	-75628161	True	NA	-8	True	AATAAA	-26	NA	75640224	75639092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75639100_75640200
transcript_49229.nnic	chr15	-	833	2	FSM	ENSG00000246877.2	ENST00000689581.1	763	2	-76	6	-76	-6	multi-exon	FALSE	canonical	1	4	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTATAGTAATGATTGGT	NA	False	NA	NA	False	ATTAAA	-17	NA	75738705	75734789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_75735304_75738386
transcript_4923.known	chr1	+	1777	10	FSM	ENSG00000117399.14	ENST00000372462.1	1777	10	0	0	0	0	multi-exon	FALSE	canonical	3	2055	junction_6	162.067506130038	1791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTTCAGCTAATGCCTT	43346104	False	NA	63	True	AATAAA	-32	NA	43359012	43363203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43359397_43359489_43359639_43359724_43359822_43359968_43360098_43360192_43360390_43360498_43360594_43360732_43360962_43361119_43361246_43362194_43362313_43362950
transcript_49230.known	chr15	+	520	3	FSM	ENSG00000260288.5	ENST00000661459.1	520	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCACGTCCATGCTCATT	NA	False	NA	NA	False	CATAAA	-18	NA	75758517	75763320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75758614_75762341_75762428_75762982
transcript_49238.known	chr15	+	2164	6	FSM	ENSG00000167196.14	ENST00000569022.1	2164	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	259.577040587183	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCTGTGCAGGTATGAC	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75934107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75904104_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_49249.known	chr15	+	10707	7	FSM	ENSG00000167196.14	ENST00000308275.8	10707	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.921910149673	1449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGAGCTTTTCATTTTG	75892089	True	NA	15	True	AATAAA	-15	NA	75903877	75942511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883_75930050_75932684
transcript_49250.known	chr15	+	1486	6	FSM	ENSG00000167196.14	ENST00000453211.6	1486	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	275.737846513677	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTGGGAGCCATTACTT	75892089	True	NA	NA	False	GATAAA	-15	NA	75903877	75930655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_75904104_75904490_75904630_75913202_75913291_75914109_75914206_75917229_75917395_75929883
transcript_49251.nic	chr15	+	910	6	ISM	ENSG00000169758.13	ENST00000484722.5	2292	11	-25	34767	-25	-34767	5prime_fragment	TRUE	canonical	1	3	junction_2	2.60768096208106	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGGGAAACTGTCAACGT	76059407	True	NA	NA	False	AATAAA	-21	NA	76059932	76170195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156653_76160094_76160169_76169815
transcript_49252.nic	chr15	+	1016	6	ISM	ENSG00000169758.13	ENST00000388942.8	2372	11	-52	34768	-25	-34767	5prime_fragment	FALSE	canonical	1	3	junction_2	2.72763633939717	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCGGGAAACTGTCAACGT	76059407	True	NA	NA	False	AATAAA	-21	NA	76059932	76170195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_76060017_76134167_76134302_76137706_76137896_76156603_76156759_76160094_76160169_76169815
transcript_49253.known	chr15	+	1932	4	FSM	ENSG00000169758.13	ENST00000559079.5	1932	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.816496580927726	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGTGTGTCTGTCCTTTCA	76059459	True	NA	NA	False	ATTAAA	-19	NA	76059984	76114203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_76060017_76109032_76109184_76112017_76112109_76112545
transcript_49254.nic	chr15	+	747	3	ISM	ENSG00000169758.13	ENST00000484722.5	2292	11	-25	66727	-25	24032	5prime_fragment	TRUE	canonical	2	3	junction_2	0.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATTCCC	76059407	True	NA	NA	False	AGTAAA	-24	NA	76059932	76138235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_76060017_76134167_76134302_76137706
transcript_4926.known	chr1	-	973	8	FSM	ENSG00000066322.15	ENST00000497050.5	973	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	65.9532920686593	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGATGTATGGCACCATC	-43365937	False	NA	NA	False	NA	NA	NA	43367738	43364049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367485
transcript_4927.known	chr1	-	1466	8	FSM	ENSG00000066322.15	ENST00000372458.8	1466	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_2	11.141025490483	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	-43366210	True	NA	-5	True	ATTAAA	-18	NA	43368011	43363400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_49272.known	chr15	-	2289	12	FSM	ENSG00000140374.17	ENST00000557943.6	2289	12	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_11	92.6840362657583	1821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGCATTTCAGTCTTC	-76303855	True	NA	0	True	TATAAA	-19	NA	76311469	76215352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_49280.known	chr15	-	1346	11	FSM	ENSG00000140374.17	ENST00000433983.6	1346	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_10	220.114152202897	1231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTAAAAAAGCACGGCTAT	-76303790	True	NA	NA	False	NA	NA	NA	76311404	76216083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76311349
transcript_49281.known	chr15	-	1289	11	FSM	ENSG00000140374.17	ENST00000267950.12	1289	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	275.553189057938	1842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTTGTTTATTTATT	-76303834	True	NA	-23	True	AAGAAA	-7	NA	76311448	76216249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76295590_76295738_76311349
transcript_49283.known	chr15	-	917	11	FSM	ENSG00000140374.17	ENST00000688389.1	2477	11	334	1226	-4	-24	multi-exon	FALSE	canonical	3	20	junction_4	270.660839428241	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTGAGATATTGAAGAAAAA	-76303782	True	NA	NA	False	NA	NA	NA	76311396	76216582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76292618_76292701_76295590_76295738_76311349
transcript_49285.known	chr15	-	942	10	FSM	ENSG00000140374.17	ENST00000560726.5	942	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	285.56376987753	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGAGAGCTACATTTCATA	-76303852	True	NA	-85	True	NA	NA	NA	76311466	76216467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76292430_76292514_76311349
transcript_4929.known	chr1	-	1034	8	FSM	ENSG00000066322.15	ENST00000464204.5	1034	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	70.8173851594107	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTTTGGTTCCTCACC	-43366206	True	NA	NA	False	NA	NA	NA	43368007	43363755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364614_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_49290.known	chr15	-	792	9	FSM	ENSG00000140374.17	ENST00000559602.5	792	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	304.506747667437	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATTGGAAAGCATGGA	-76303800	True	NA	-100	True	NA	NA	NA	76311414	76216482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76216598_76225848_76225930_76231332_76231399_76274411_76274495_76283756_76283826_76285636_76285739_76286370_76286482_76287845_76287946_76311349
transcript_49300.nnic	chr15	-	2083	12	NNC	ENSG00000140386.13	novel	4707	31	NA	NA	16765	0	at_least_one_novel_splicesite	TRUE	canonical	2	7	junction_11	12.0302648652169	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACTTTTTAAGGTC	-76648860	True	NA	-6	True	AATAAA	-26	NA	76648893	76348187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_76348737_76351236_76351289_76353948_76354141_76376161_76376312_76381377_76381616_76404523_76404680_76434077_76434311_76471211_76471336_76504858_76504975_76574157_76574285_76621763_76621830_76648813
transcript_49301.known	chr15	-	2507	19	FSM	ENSG00000140386.13	ENST00000564590.5	2507	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	9.86279328375206	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACAAAGAAAAGAAAAAGCT	-76904665	True	NA	NA	False	NA	NA	NA	76905444	76702965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771723_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811_76883877_76905298
transcript_49302.known	chr15	-	4707	31	FSM	ENSG00000140386.13	ENST00000324767.11	4707	31	0	0	0	0	multi-exon	TRUE	canonical	2	25	junction_15	7.82616693464233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAACTTTTTAAGGTC	NA	False	NA	-6	True	AATAAA	-26	NA	76883876	76348187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_76348737_76351236_76351289_76353948_76354141_76376161_76376312_76381377_76381616_76404523_76404680_76434077_76434311_76471211_76471336_76504858_76504975_76574157_76574285_76621763_76621830_76665652_76665790_76701757_76701866_76702849_76703003_76705902_76705985_76728594_76728738_76733228_76733385_76753807_76753949_76764960_76765073_76765336_76765455_76765562_76765639_76766917_76767089_76771741_76771955_76774854_76775118_76795279_76795441_76800247_76800365_76804532_76804634_76841733_76841932_76857808_76857880_76862415_76862534_76883811
transcript_49303.known	chr15	+	6218	7	FSM	ENSG00000117906.14	ENST00000394885.8	6218	7	0	0	0	0	multi-exon	FALSE	canonical	3	1392	junction_5	59.080923787256	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCTGCCTGCTATAAAAT	76921442	True	NA	NA	False	AATAAA	-13	NA	76931748	76954393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_76931986_76932360_76932467_76935525_76935723_76943757_76943872_76947420_76947518_76948409_76948553_76949069
transcript_49305.known	chr15	+	1052	10	FSM	ENSG00000140368.13	ENST00000557995.1	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	2.62936879248872	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGTGCGTTCTGTTCTCC	77028252	True	NA	-8	True	NA	NA	NA	77028342	77037313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77028424_77028553_77028653_77029528_77029575_77030501_77030582_77031179_77031279_77032297_77032395_77032861_77032953_77035507_77035564_77035801_77035936_77037044
transcript_4931.known	chr1	-	828	7	FSM	ENSG00000066322.15	ENST00000487209.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	64.6675257674893	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACCTGTGACCAAGGCTT	-43366198	True	NA	NA	False	NA	NA	NA	43367999	43363835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43364927_43365009_43365563_43365624_43367914
transcript_49316.nnic	chr15	+	748	6	NIC	ENSG00000140368.13	novel	1052	10	NA	NA	-44	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	4.4988887516808	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGCTGGGGTCCCG	NA	False	NA	11	True	AATAAA	-19	NA	77028298	77037332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_77028424_77028553_77028653_77029528_77029575_77035507_77035564_77035801_77035936_77037044
transcript_49320.nnic	chr15	+	746	5	NIC	ENSG00000140368.13	novel	1052	10	NA	NA	-1904	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGCTGGGGTCCCG	77030378	True	NA	11	True	AATAAA	-19	NA	77030412	77037332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_77030582_77031179_77031279_77035507_77035564_77035801_77035936_77037044
transcript_49321.nnic	chr15	+	657	4	NIC	ENSG00000140368.13	novel	1052	10	NA	NA	-1914	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	5.71547606649408	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGTGCTGGGGTCCCG	77030312	False	NA	11	True	AATAAA	-19	NA	77030402	77037332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_77030582_77035507_77035564_77035801_77035936_77037044
transcript_49325.known	chr15	-	6348	7	FSM	ENSG00000140391.15	ENST00000267970.9	6348	7	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_5	56.2069588416081	1216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-77060515	True	NA	NA	False	NA	NA	NA	77071109	77041403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77070891
transcript_49326.known	chr15	-	1592	7	FSM	ENSG00000140391.15	ENST00000561277.5	1592	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	373.404048362271	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAATTCAATAAACTCTGT	-77060528	True	NA	-35	True	AATAGA	-5	NA	77071122	77046059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77071004
transcript_49327.known	chr15	-	1340	7	FSM	ENSG00000140391.15	ENST00000558745.5	1340	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	382.249373228176	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGACTAAAATAGATTG	NA	False	NA	-36	True	TTTAAA	-38	NA	77083984	77046331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77056063_77056256_77083846
transcript_49331.known	chr15	-	1530	6	FSM	ENSG00000140391.15	ENST00000424443.7	1530	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	414.836064006012	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATATTATTTTTCATTAT	-77060515	True	NA	-5	True	AATAAA	-17	NA	77071109	77046029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77046928_77052384_77052469_77052776_77052930_77054177_77054280_77055788_77055864_77070891
transcript_4934.known	chr1	-	1451	7	FSM	ENSG00000066322.15	ENST00000413844.3	1451	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	77.0449003287477	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTGTGTGTATACGTATG	NA	False	NA	-2	True	ATTAAA	-21	NA	43368074	43363397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364323_43364461_43364541_43364648_43364737_43364795_43365185_43365377_43365563_43365624_43367914
transcript_49340.nnic	chr15	-	2336	4	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-51	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15.9234278833282	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	-77418048	True	NA	-5	True	AATAAA	-25	NA	77420195	77108157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_77110159_77286422_77286505_77365162_77365226_77420005
transcript_49341.nnic	chr15	-	2265	3	NNC	ENSG00000173517.11	novel	12003	10	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACAAATGCTTGTCCTTT	-77418040	True	NA	-5	True	AATAAA	-25	NA	77420187	77108157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_77110159_77286422_77286505_77420005
transcript_49342.nic	chr15	-	1007	3	ISM	ENSG00000173517.11	ENST00000569159.1	531	6	-101	33252	-51	-1989	5prime_fragment	FALSE	canonical	3	31	junction_1	2.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAAGAATCAAATAGAT	-77418048	True	NA	NA	False	AATAGA	-26	NA	77420195	77285750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_77286505_77365162_77365226_77420005
transcript_49343.known	chr15	+	4112	11	FSM	ENSG00000140382.15	ENST00000381714.7	4112	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	155.070338878846	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	77420656	False	NA	19	True	ATTAAA	-17	NA	77420673	77485603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77421005_77447718_77447812_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_49344.known	chr15	+	3805	10	FSM	ENSG00000140382.15	ENST00000336216.9	3805	10	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_9	36.8443506231214	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACCTGTTTCAATTTTAC	77418667	True	NA	19	True	ATTAAA	-17	NA	77420887	77485603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178_77479322_77482969
transcript_49347.nic	chr15	+	1909	9	ISM	ENSG00000140382.15	ENST00000336216.9	3805	10	-455	5999	21	0	5prime_fragment	FALSE	canonical	3	376	junction_3	25.8215026673507	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACAGTTTTTTCTTATGCTT	77420380	False	NA	7	True	AATAAA	-16	NA	77420432	77479604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_77421005_77458403_77458497_77464239_77464388_77467094_77467308_77470909_77471043_77471782_77471815_77477554_77477631_77478294_77478511_77479178
transcript_49350.known	chr15	+	747	3	FSM	ENSG00000140382.15	ENST00000560986.1	747	3	0	0	0	0	multi-exon	FALSE	canonical	3	422	junction_2	16	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGCCTGGGCAGTCATG	77418714	False	NA	NA	False	NA	NA	NA	77420934	77464823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_77421005_77458403_77458497_77464239
transcript_49351.known	chr15	-	3477	2	FSM	ENSG00000169783.13	ENST00000355300.7	3477	2	0	0	0	0	multi-exon	TRUE	canonical	3	382	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGTGACTGTTCTCATTAT	-77631663	True	NA	NA	False	NA	NA	NA	77632912	77613026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_77615901_77632309
transcript_49355.known	chr15	-	6215	14	FSM	ENSG00000103740.10	ENST00000258873.9	6215	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	4.96973086314249	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGTCTTCAAGTGCATT	-78234481	True	NA	NA	False	AAAAAG	-15	NA	78234565	78167467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78171530_78173592_78173840_78174384_78174525_78178613_78178832_78179549_78179781_78180754_78180937_78181968_78182146_78182465_78182616_78182704_78182786_78193505_78193627_78193931_78194021_78194505_78194727_78208001_78208103_78234370
transcript_49356.known	chr15	+	2110	12	FSM	ENSG00000166411.14	ENST00000560667.5	2110	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	114.726768476057	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTTCCAAGAGCTTTTA	78145276	True	NA	NA	False	NA	NA	NA	78149359	78169715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_4936.nnic	chr1	-	1389	7	NIC	ENSG00000066322.15	novel	1466	8	NA	NA	0	-3	combination_of_known_splicesites	FALSE	canonical	3	10	junction_1	74.1157128339793	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGGAGGCTGTGTGTATA	NA	False	NA	-8	True	ATTAAA	-15	NA	43368074	43363403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_43364138_43364541_43364648_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_49368.known	chr15	+	4083	11	FSM	ENSG00000166411.14	ENST00000299518.7	4083	11	0	0	0	0	multi-exon	FALSE	canonical	3	292	junction_6	13.6853936735485	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGACTAGGTTTCTGTCTTG	78145278	True	NA	NA	False	AATAAA	-21	NA	78149361	78171945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78160091_78160207_78161580_78161769_78162233_78162368_78163506_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_49376.known	chr15	+	1008	10	FSM	ENSG00000166411.14	ENST00000559803.5	1008	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	134.750798802003	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGAGGAAATCTGTCGCCG	78145296	True	NA	40	True	NA	NA	NA	78149379	78168966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78157547_78157632_78161580_78161769_78162233_78162368_78163469_78163610_78163715_78163781_78164991_78165077_78166149_78166303_78168921
transcript_49377.known	chr15	-	1499	6	FSM	ENSG00000136425.14	ENST00000258930.8	1499	6	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	96.0362431585076	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCTTCTGATCCTTGA	-78129919	True	NA	28	True	NA	NA	NA	78131445	78104605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78105333_78105738_78105935_78109234_78109383_78111164_78111277_78123704_78123740_78131164
transcript_49379.known	chr15	+	567	6	FSM	ENSG00000166411.14	ENST00000559106.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	147.504033843146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCAAAACATTTGACCTTTA	78145325	True	NA	NA	False	NA	NA	NA	78149408	78161633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78149431_78155212_78155276_78156907_78157163_78157572_78157632_78160091_78160207_78161580
transcript_49386.known	chr15	-	1036	11	FSM	ENSG00000140395.9	ENST00000560569.5	1036	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	258.180266480612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACCAGGAAATTCACATCTA	-78290031	True	NA	NA	False	AGTAAA	-41	NA	78299570	78283467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299455
transcript_49387.known	chr15	-	1266	11	FSM	ENSG00000140395.9	ENST00000558311.5	1266	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_10	247.425059361416	862	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290066	True	NA	-4	True	CATAAA	-17	NA	78299605	78283234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295794_78299561
transcript_49390.known	chr15	+	3245	8	FSM	ENSG00000140403.13	ENST00000394855.7	3245	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	11.6128008188009	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	NA	False	NA	18	True	ATTAAA	-23	NA	78264085	78282196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78264394_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_49392.known	chr15	+	2961	8	FSM	ENSG00000140403.13	ENST00000343789.7	2961	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	12.8476155176669	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGCTTTGCTTTTTCCTTT	78264172	True	NA	18	True	ATTAAA	-23	NA	78264561	78282196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275497_78275729_78280044_78280146_78280244
transcript_49404.known	chr15	-	1202	11	FSM	ENSG00000140395.9	ENST00000267973.7	1202	11	0	0	0	0	multi-exon	FALSE	canonical	3	664	junction_10	80.8609299971253	3851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTGTCCTTGAACATG	-78290070	True	NA	-4	True	CATAAA	-17	NA	78299609	78283234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78292615_78292789_78293166_78293273_78294945_78294974_78295674_78295726_78299561
transcript_49405.known	chr15	-	884	9	FSM	ENSG00000140395.9	ENST00000558459.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	31	junction_6	271.709604863354	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAGCTTTCTTAATGCAA	-78290052	True	NA	-25	True	NA	NA	NA	78299591	78283255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78283522_78285260_78285340_78286040_78286134_78288288_78288383_78289618_78289713_78289950_78290100_78294945_78294974_78295674_78295726_78299561
transcript_49406.known	chr15	+	1320	8	FSM	ENSG00000140403.13	ENST00000483802.6	1320	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	15.6479117730496	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTCTAGTCTGCATATG	78264172	True	NA	4	True	TATAAA	-1	NA	78264561	78280668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78264586_78264756_78264896_78270496_78270678_78273094_78273200_78274196_78274425_78275610_78275729_78280044_78280146_78280244
transcript_49417.known	chr15	+	401	1	FSM	ENSG00000166426.8	ENST00000560753.1	401	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	321	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACCTTTTCCCTTTTTTG	78347716	False	NA	26	True	ATTAAA	-16	NA	78347820	78348221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78347800_78348200
transcript_49418.known	chr15	+	738	4	FSM	ENSG00000166426.8	ENST00000299529.7	738	4	0	0	0	0	multi-exon	FALSE	canonical	3	2941	junction_3	68.425141578224	25544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTTCCCTTTTTTGGTTT	78298293	True	NA	30	True	ATTAAA	-20	NA	78340352	78348225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78340499_78341042_78341222_78343498_78343613_78347926
transcript_49419.known	chr15	+	6324	22	FSM	ENSG00000136381.13	ENST00000258886.13	6324	22	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	20.1497792901604	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATTCTTGTTCTGTTTT	78430033	True	NA	16	True	AATAAA	-19	NA	78438215	78501453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_4942.known	chr1	-	867	6	FSM	ENSG00000066322.15	ENST00000470968.6	867	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81.832511876393	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCTACAGGGACCACGG	-43366224	True	NA	NA	False	NA	NA	NA	43368025	43363770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43364138_43364737_43364795_43364927_43365009_43365185_43365377_43365563_43365624_43367914
transcript_49423.known	chr15	+	2917	21	FSM	ENSG00000136381.13	ENST00000558570.5	2917	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	42.5293722032197	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTACCATGGAGCAGCAG	78430126	True	NA	NA	False	NA	NA	NA	78438308	78498209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78471740_78471925_78473241_78473382_78476187_78476360_78478296_78478398_78483317_78483435_78484760_78484921_78485704_78485841_78487732_78487818_78488179_78488337_78488646_78488772_78490421_78490527_78490618_78490762_78493908_78494057_78494141_78494265_78497125_78497312_78498032
transcript_49430.known	chr15	+	4396	8	FSM	ENSG00000136381.13	ENST00000560440.5	4396	8	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_6	6.86309265683675	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACCAAGAGTAGAGGAGC	78430101	True	NA	NA	False	NA	NA	NA	78438283	78476700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270_78466490_78470531_78470602_78471740_78471925_78473241
transcript_49432.nic	chr15	+	1516	5	ISM	ENSG00000136381.13	ENST00000560440.5	4396	8	-96	9474	12	790	5prime_fragment	FALSE	canonical	3	151	junction_3	3.26917420765551	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCGTATGTTAACGATAAA	78430005	True	NA	NA	False	AAAAAG	-1	NA	78438187	78467226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_78438357_78439794_78439882_78462921_78463088_78465250_78465389_78466270
transcript_49433.known	chr15	+	847	5	FSM	ENSG00000188266.14	ENST00000408962.6	847	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.11803398874989	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACAAGTGCCAGGTCCTG	78507028	True	NA	NA	False	AATAAA	-20	NA	78507563	78537372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78507672_78513083_78513426_78514967_78515108_78527379_78527564_78537299
transcript_49441.known	chr15	+	1094	9	FSM	ENSG00000041357.16	ENST00000559082.5	1094	9	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	1130.7164142149	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAATGAAGGAATAAATT	78513820	True	NA	10	True	AATAAA	-11	NA	78540420	78549186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540464_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_49446.known	chr15	+	4378	9	FSM	ENSG00000041357.16	ENST00000044462.12	4378	9	0	0	0	0	multi-exon	FALSE	canonical	3	3132	junction_8	190.823052852636	7674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGTACTCCTGTGTATAA	78513843	True	NA	NA	False	AATAAA	-14	NA	78540443	78552417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_49449.known	chr15	+	944	9	FSM	ENSG00000041357.16	ENST00000560217.5	944	9	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_3	1114.62605837115	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAGTGGGAAAATAGGACA	78513804	True	NA	NA	False	NA	NA	NA	78540404	78549037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542575_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_49452.known	chr15	+	786	9	FSM	ENSG00000041357.16	ENST00000559365.5	786	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1173.50042607576	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACAGTAATCAGAGTTC	78514134	False	NA	NA	False	NA	NA	NA	78540734	78548820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540836_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_49458.known	chr15	+	773	8	FSM	ENSG00000041357.16	ENST00000558281.5	773	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	1226.35940399016	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCACCATTTCAGTGTAAAA	78513877	True	NA	NA	False	GATAAA	-30	NA	78540477	78548970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78542482_78542646_78544189_78544268_78544868_78544958_78545633_78545765_78548789
transcript_49461.known	chr15	+	1019	8	FSM	ENSG00000041357.16	ENST00000413382.6	1019	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	1240.39233424636	1320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	78513826	True	NA	-19	True	AATAAA	-29	NA	78540426	78549204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78540540_78541904_78541931_78542176_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_49470.known	chr15	+	2596	6	FSM	ENSG00000041357.16	ENST00000560099.5	2596	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	1423.72005675273	848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAGCAGTAATTGT	78513860	True	NA	-19	True	AATAAA	-29	NA	78540460	78549204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78542220_78544189_78544268_78544868_78544958_78545633_78545765_78546574_78546699_78548789
transcript_49475.known	chr15	-	3015	6	FSM	ENSG00000080644.16	ENST00000326828.6	3015	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	2.19089023002066	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGCTGTGACTCATGTTT	-78620632	True	NA	-4	True	AATAAA	-16	NA	78620996	78595308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78596733_78601252_78602265_78617023_78617134_78618616_78618662_78618775_78618916_78620712
transcript_49487.known	chr15	+	1468	12	FSM	ENSG00000185787.15	ENST00000559345.5	1468	12	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	2290.27369615638	1155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATACATGTTAATGCTATAT	78772016	True	NA	NA	False	NA	NA	NA	78873004	78897389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873219_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_49499.known	chr15	+	855	10	FSM	ENSG00000185787.15	ENST00000558502.5	855	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2497.69870871292	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCACTTATGTTTGGATC	78772041	False	NA	NA	False	NA	NA	NA	78873029	78897077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873058_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_4951.nnic	chr1	-	957	3	NIC	ENSG00000066322.15	novel	1451	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	105.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGGCTGTGTGTATACGT	NA	False	NA	-5	True	ATTAAA	-18	NA	43368074	43363400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_43364138_43365563_43365624_43367914
transcript_49512.known	chr15	+	2172	12	FSM	ENSG00000185787.15	ENST00000426013.7	2172	12	0	0	0	0	multi-exon	FALSE	canonical	3	6640	junction_6	618.320211781501	14083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTCTCCCCTTTGATAGG	78771901	True	NA	NA	False	ATTAAA	-26	NA	78872889	78898139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_78873058_78878212_78878260_78880511_78880580_78886140_78886228_78887268_78887350_78890988_78891015_78891483_78891573_78892211_78892314_78893538_78893628_78894057_78894231_78894819_78894905_78896982
transcript_49513.known	chr15	-	1524	13	FSM	ENSG00000103811.18	ENST00000679172.1	1524	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	31.3646784704635	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGAGCATGCTGGTC	-78943959	True	NA	-34	True	AATAAA	-19	NA	78945003	78921773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78937685_78937824_78939139_78939172_78944890
transcript_49515.known	chr15	-	1540	13	FSM	ENSG00000103811.18	ENST00000677316.1	1540	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	31.3646784704635	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-78944014	True	NA	-29	True	AATAAA	-24	NA	78945058	78921768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537_78944632_78944890
transcript_49516.known	chr15	-	1601	13	FSM	ENSG00000103811.18	ENST00000678644.1	1601	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	36.3183264115148	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCATGCTGGTCCTGGG	-78944002	True	NA	-29	True	AATAAA	-24	NA	78945046	78921768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937497_78939139_78939172_78944537_78944632_78944890
transcript_49517.known	chr15	-	1881	12	FSM	ENSG00000103811.18	ENST00000678886.1	1881	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_11	23.5757965256358	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGTGTGGCCTCCCCA	-78944050	True	NA	NA	False	NA	NA	NA	78945094	78921482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944777
transcript_49518.known	chr15	-	1386	12	FSM	ENSG00000103811.18	ENST00000525807.6	1386	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	24.9485420829778	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGCATGCTGGTCCTG	-78943961	True	NA	-31	True	AATAAA	-22	NA	78945005	78921770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939167_78944890
transcript_49519.known	chr15	-	1198	11	FSM	ENSG00000103811.18	ENST00000677789.1	1198	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	26.2114478806494	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCACATGGACCACGAAT	-78943974	True	NA	-150	True	NA	NA	NA	78945018	78921889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_4952.known	chr1	-	1483	8	FSM	ENSG00000159479.17	ENST00000290663.10	1483	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	76.9542668321482	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-43386466	True	NA	-11	True	AATAAA	-15	NA	43389808	43383916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43384553_43385045_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_49520.known	chr15	-	1783	12	FSM	ENSG00000103811.18	ENST00000677448.1	1783	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	24.3985502888665	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCAGATGGAGCATGCTGG	-78944005	True	NA	-36	True	AATAAA	-17	NA	78945049	78921775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78922206_78922992_78923119_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944537
transcript_49521.known	chr15	-	1136	11	FSM	ENSG00000103811.18	ENST00000676850.1	1136	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.9727851870792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTAAAGTCTGCCAG	-78944036	True	NA	NA	False	AATAAA	-21	NA	78945080	78923753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_78923985_78925333_78925441_78927712_78927782_78929411_78929494_78931450_78931507_78932371_78932459_78934977_78935083_78935679_78935751_78937317_78937424_78939139_78939172_78944890
transcript_49523.known	chr15	+	1483	4	FSM	ENSG00000166557.14	ENST00000543455.1	1483	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	203.892673292157	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGGAGACTTGTGCCTT	79303844	True	NA	13	True	AATAAA	-15	NA	79311158	79322837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_79311418_79313756_79314006_79314540_79314656_79321977
transcript_49524.known	chr15	+	1418	3	FSM	ENSG00000166557.14	ENST00000299705.10	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	441	junction_2	1.5	1987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGACTTGTGCCTTTAT	79303797	True	NA	16	True	AATAAA	-18	NA	79311111	79322840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_79311418_79313756_79314006_79321977
transcript_49532.known	chr15	-	859	4	FSM	ENSG00000259332.3	ENST00000479961.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	328.75928377259	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAAATAATCAGTGTTTTA	-79918704	True	NA	NA	False	NA	NA	NA	79923744	79845194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79907628_79907685_79923451
transcript_49546.nic	chr15	-	1058	3	NIC	ENSG00000136371.11	novel	948	3	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	283.5	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	NA	False	NA	-1	True	ATTAAA	-34	NA	79897119	79844975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_49548.known	chr15	-	948	3	FSM	ENSG00000136371.11	ENST00000559722.2	948	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	406	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCTGGTGTTAATGTGAC	NA	False	NA	-1	True	ATTAAA	-34	NA	79897379	79844975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79897160
transcript_49550.known	chr15	-	632	3	FSM	ENSG00000259332.3	ENST00000494999.1	632	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	399	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCTACTATGATGCCT	-79918714	True	NA	NA	False	NA	NA	NA	79923754	79845375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79923451
transcript_49552.nic	chr15	-	994	3	NIC	ENSG00000136371.11	novel	2301	3	NA	NA	-105	-64	combination_of_known_junctions	FALSE	canonical	3	253	junction_2	283.5	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGAAGTGTGAATAGTAGAA	NA	False	NA	-65	True	TATAAA	-19	NA	79897119	79845039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_79845443_79889092_79889355_79896790
transcript_49558.known	chr15	-	529	3	FSM	ENSG00000180953.11	ENST00000485386.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	92.5	724	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	-79918662	True	NA	-16	True	AATAAA	-23	NA	79923702	79898903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79899126_79907628_79907685_79923451
transcript_4956.known	chr1	-	1968	7	FSM	ENSG00000159479.17	ENST00000372457.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_6	35.512517354996	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCACTGGCTCAGGGTTG	-43386458	True	NA	-11	True	AATAAA	-15	NA	43389800	43383916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387648_43388309_43388429_43389758
transcript_49561.nnic	chr15	-	715	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	223	608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	NA	False	NA	-4	True	AATAAA	-22	NA	79923802	79898839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_49568.nnic	chr15	-	651	3	NNC	ENSG00000180953.11	novel	529	3	NA	NA	-100	0	at_least_one_novel_splicesite	FALSE	canonical	3	95	junction_2	223	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCCAGAGTTACAGAAAT	NA	False	NA	-16	True	AATAAA	-23	NA	79923802	79898903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_79899126_79907628_79907707_79923451
transcript_4957.known	chr1	-	1186	7	FSM	ENSG00000159479.17	ENST00000372455.4	1186	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	98.5573718985828	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTCTCCCCACCACCC	-43386442	True	NA	-13	True	AATAAA	-15	NA	43389784	43384725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43385107_43385977_43386227_43386588_43386671_43386857_43386999_43387502_43387630_43388309_43388490_43389758
transcript_49570.nnic	chr15	-	611	2	NIC	ENSG00000180953.11	novel	529	3	NA	NA	-76	-2	combination_of_known_splicesites	FALSE	canonical	3	44	junction_1	0	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCATTTTTGTCTTCAG	-79918738	True	NA	-6	True	AATAAA	-20	NA	79923778	79898841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_79899126_79923451
transcript_49572.known	chr15	-	2301	3	FSM	ENSG00000136371.11	ENST00000258874.4	2301	3	0	0	0	0	multi-exon	TRUE	canonical	3	605	junction_2	107.5	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGCTGAATATGGGTTTG	-79891476	True	NA	NA	False	AGTAAA	-16	NA	79897014	79843546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79845443_79889092_79889355_79896871
transcript_49573.known	chr15	-	694	2	FSM	ENSG00000180953.11	ENST00000562759.1	694	2	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATTTTTGTCTTCAGTT	NA	False	NA	-4	True	AATAAA	-22	NA	79908036	79898839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79899126_79907628
transcript_49574.known	chr15	-	470	2	FSM	ENSG00000136371.11	ENST00000560919.5	470	2	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTATTATGGTGTTAGGA	-79891459	True	NA	NA	False	NA	NA	NA	79896997	79889091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_79889355_79896790
transcript_49586.known	chr15	+	1559	7	FSM	ENSG00000086666.19	ENST00000559157.5	1559	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	978.245822321204	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80059496	False	NA	-6	True	NA	NA	NA	80059634	80138360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80059810_80115026_80115071_80120327_80120499_80121747_80121821_80122699_80122801_80131179_80131294_80137479
transcript_49593.known	chr15	+	1602	7	FSM	ENSG00000086666.19	ENST00000559775.5	1602	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	862.740095406619	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAATAAAAAGGAAAACCA	80071968	True	NA	-8	True	NA	NA	NA	80072582	80138358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80072648_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_49604.known	chr15	+	1446	6	FSM	ENSG00000086666.19	ENST00000559835.5	1446	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	806.330602172583	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80071963	True	NA	-6	True	NA	NA	NA	80072577	80138360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_49609.known	chr15	+	780	5	FSM	ENSG00000086666.19	ENST00000558688.5	780	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	879.340484397256	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTATTAGACAAATAAGGT	80071972	True	NA	NA	False	AAAAAG	-22	NA	80072586	80131517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80072648_80120327_80120499_80121711_80121821_80122699_80122801_80131179
transcript_49613.known	chr15	+	1472	6	FSM	ENSG00000086666.19	ENST00000558494.5	1472	6	0	0	0	0	multi-exon	FALSE	canonical	3	1569	junction_1	245.000734692776	5386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATAAAAAGGAAAACCAGA	80045770	True	NA	-6	True	NA	NA	NA	80059713	80138360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80059810_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_49614.known	chr15	+	1706	7	FSM	ENSG00000086666.19	ENST00000261749.11	1706	7	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	774.08715056295	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTTTTCTCTTATTCTT	80045732	True	NA	27	True	AATAAA	-27	NA	80059675	80138393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80059810_80098415_80098579_80120327_80120499_80121711_80121821_80122699_80122801_80131179_80131294_80137479
transcript_49615.known	chr15	+	1471	15	FSM	ENSG00000103876.14	ENST00000261755.9	1471	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	37.4798585365309	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCAGATGCAGCTGTGTC	80152554	True	NA	22	True	AATAAA	-26	NA	80152793	80186343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80152842_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_49616.known	chr15	+	2152	15	FSM	ENSG00000103876.14	ENST00000407106.5	2152	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	35.0458154944848	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACCCTGCATGTCCAGTGT	80152540	True	NA	NA	False	AATACA	-18	NA	80152779	80186946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80152906_80153025_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_49622.known	chr15	+	1456	14	FSM	ENSG00000103876.14	ENST00000561421.6	1456	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_8	12.2879649592696	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGCTGTGTCCACTTA	80152253	True	NA	28	True	AATAAA	-32	NA	80152998	80186349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80153136_80158059_80158171_80159755_80159878_80160409_80160460_80162245_80162337_80168051_80168150_80168263_80168317_80172148_80172249_80173013_80173145_80175015_80175092_80177536_80177584_80180123_80180226_80181041_80181160_80186129
transcript_49623.known	chr15	-	998	5	FSM	ENSG00000259495.3	ENST00000656160.1	998	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.06217782649107	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCATCATCTTGCAACTTG	-80403920	True	NA	-21	True	AATAAA	-9	NA	80404214	80344868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_80345128_80347698_80347785_80397943_80398007_80403501_80403586_80403708
transcript_49625.known	chr15	+	2361	3	FSM	ENSG00000136379.12	ENST00000258884.5	2361	3	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	2.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGGCTTGTGCAGTTT	80694426	True	NA	30	True	AATAAA	-18	NA	80695309	80755621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_80696020_80749512_80749693_80754150
transcript_49632.known	chr15	-	4200	3	FSM	ENSG00000117899.11	ENST00000261758.6	4200	3	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_2	37	3843	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGAAACCTGTATCAGAT	-80980268	True	NA	-5	True	AATAAA	-27	NA	80989819	80975751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_80979478_80981949_80982183_80989578
transcript_49633.nnic	chr15	+	847	6	NNC	ENSG00000156206.14	novel	1612	7	NA	NA	-8	-1742	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.489897948556636	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCGCCTCAATAATTTTC	NA	False	NA	NA	False	AATAAA	-18	NA	81134261	81147437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_81134399_81135269_81135360_81136515_81136749_81138050_81138136_81143661_81143821_81147294
transcript_49634.known	chr15	-	4887	6	FSM	ENSG00000172345.14	ENST00000302824.7	4887	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	11.0381157812373	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCATTAAGCTCTCTT	-81323731	True	NA	-4	True	AATAAA	-25	NA	81324141	81309052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81322898_81322949_81324000
transcript_49636.nic	chr15	-	1475	5	NIC	ENSG00000172345.14	novel	1264	5	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	8.61684396980704	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTTCAATGTGTCTTCCAT	-81323784	True	NA	-6	True	TTTAAA	-26	NA	81324194	81312666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81323801
transcript_49637.known	chr15	-	1264	5	FSM	ENSG00000172345.14	ENST00000325346.6	1264	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	11.4318633651737	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTCAATGTGTCTTCCA	-81323773	True	NA	-7	True	TTTAAA	-25	NA	81324183	81312667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81324000
transcript_49638.nic	chr15	-	1371	5	NIC	ENSG00000172345.14	novel	1264	5	NA	NA	-11	-103	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	8.61684396980704	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTTGTATATGGCTTTAA	-81323784	True	NA	-18	True	AATATA	-14	NA	81324194	81312770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_81313404_81318408_81318503_81319338_81319457_81322407_81322541_81323801
transcript_49641.known	chr15	+	1783	7	FSM	ENSG00000259343.8	ENST00000665273.1	1783	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	7.0099136149377	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCATGGAATAATCTAACAA	81324187	True	NA	NA	False	ATTAAA	-15	NA	81324509	81420038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81358335_81358504_81361918_81362037_81380208_81380255_81418983
transcript_49642.known	chr15	+	1740	7	FSM	ENSG00000259343.8	ENST00000667849.1	1740	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.3352270282218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTTTTTTCTTATGGTT	81324186	True	NA	NA	False	AATAAA	-16	NA	81324508	81394082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81358335_81358504_81361918_81362037_81380208_81380261_81393077
transcript_49651.nnic	chr15	+	842	4	NNC	ENSG00000259343.8	novel	836	4	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	6.94422221866655	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	81324073	True	NA	NA	False	AATAAA	-25	NA	81324395	81343150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_81324562_81332344_81332456_81341561_81341709_81342732
transcript_49652.nic	chr15	+	990	4	FSM	ENSG00000259343.8	ENST00000687585.1	836	4	-154	0	-4	0	multi-exon	FALSE	canonical	3	10	junction_3	3.74165738677394	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	81324011	True	NA	NA	False	AATAAA	-25	NA	81324333	81343150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81342732
transcript_49655.nic	chr15	+	790	3	NIC	ENSG00000259343.8	novel	836	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	2.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGGAAACATCCCTTCTT	81324014	True	NA	NA	False	AATAAA	-25	NA	81324336	81343150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_81324562_81341561_81341709_81342732
transcript_49656.known	chr15	+	1386	8	FSM	ENSG00000259343.8	ENST00000654210.1	1386	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.32343178170074	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATTCACTCTTCTTAA	81324121	True	NA	NA	False	CATAAA	-20	NA	81324443	81443291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81332344_81332542_81341561_81341709_81358335_81358504_81361918_81362037_81380208_81380261_81418983_81419183_81442904
transcript_49657.known	chr15	+	273	2	FSM	ENSG00000259343.8	ENST00000560973.1	273	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTATTGATCCTATTTTAA	81324115	True	NA	NA	False	NA	NA	NA	81324437	81341710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_81324562_81341561
transcript_49679.nnic	chr15	-	717	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100445	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	16.9705627484771	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697625	81660374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81697153_81697278_81697507
transcript_49688.nnic	chr15	-	996	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-381	-7	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAAAAGA	-81798436	False	NA	NA	False	AAAAAG	-18	NA	81798451	81660381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660628_81706499_81706583_81707869_81708009_81797923
transcript_49693.nnic	chr15	-	747	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-398	-7	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	4.32049379893857	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAAAAGA	NA	False	NA	NA	False	AAAAAG	-18	NA	81798468	81660381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81662034_81662139_81797923_81798045_81798275
transcript_49696.nnic	chr15	-	778	4	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-398	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	11.0855260988773	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-14	NA	81798468	81660385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81707869_81708009_81797923_81798045_81798275
transcript_49703.nnic	chr15	-	716	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100407	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697663	81660374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81697422
transcript_49704.nnic	chr15	-	609	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	100429	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81697641	81660374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81697507
transcript_49705.nnic	chr15	-	707	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	67298	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81730772	81660374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81661999_81662139_81730540
transcript_49707.nic	chr15	-	1032	3	ISM	ENSG00000259692.6	ENST00000560054.6	747	4	72598	0	-410	0	3prime_fragment	FALSE	canonical	3	14	junction_2	11	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAGAAAAAGAAAAAAGA	NA	False	NA	NA	False	AAAAAG	-25	NA	81798480	81660374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_81660711_81661999_81662139_81797923
transcript_49709.known	chr15	-	566	3	FSM	ENSG00000259692.6	ENST00000560097.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACTTTGAAGTAGAGCCC	-81870927	True	NA	NA	False	NA	NA	NA	81871125	81660481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_81660711_81661999_81662139_81870927
transcript_49713.nnic	chr15	-	674	3	NNC	ENSG00000259692.6	novel	566	3	NA	NA	-43	-7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAGAAGAAGAAAAAGA	NA	False	NA	NA	False	AAAAAG	-18	NA	81871168	81660381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81662034_81662139_81870927
transcript_49714.nnic	chr15	-	992	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-381	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	-81798436	False	NA	NA	False	AAAAAG	-14	NA	81798451	81660385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81707869_81708009_81797923
transcript_49715.nnic	chr15	-	696	3	NNC	ENSG00000259692.6	novel	566	3	NA	NA	-34	-11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAGAAGAAGAAA	NA	False	NA	NA	False	AAAAAG	-14	NA	81871159	81660385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81660711_81707869_81708009_81870927
transcript_49718.nnic	chr15	-	426	3	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-323	76840	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGATGTCATTCCTGCCAT	-81798152	True	NA	NA	False	AATAAA	-16	NA	81798393	81739920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81740108_81797923_81798045_81798275
transcript_49725.nnic	chr15	-	1019	2	NNC	ENSG00000259692.6	novel	747	4	NA	NA	-20	3657	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAGAAAAGAAAAGGGA	NA	False	NA	NA	False	NA	NA	NA	81871145	81859180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_81859982_81870927
transcript_49727.known	chr15	-	3643	20	FSM	ENSG00000140598.15	ENST00000268206.12	3643	20	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_11	26.4542672332394	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGATGTTAGAGAACATGT	-82258474	True	NA	-13	True	AATAAA	-25	NA	82262734	82130232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82130562_82138657_82138843_82151464_82152424_82157712_82157861_82163852_82163985_82214716_82214856_82219651_82219819_82220077_82220230_82225164_82225265_82227449_82227573_82228190_82228328_82229033_82229111_82230847_82230972_82238306_82238522_82240417_82240556_82241269_82241404_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_49731.nnic	chr15	-	1135	5	NNC	ENSG00000140598.15	novel	521	3	NA	NA	-3	9887	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	101.259567449205	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTACATGTGGTTCAT	-82258477	True	NA	NA	False	AATAAA	-21	NA	82262737	82251800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_82252549_82252690_82252776_82259087_82259156_82261687_82261798_82262613
transcript_49733.nic	chr15	-	1277	4	ISM	ENSG00000140598.15	ENST00000268206.12	3643	20	-3	121568	-3	9887	5prime_fragment	FALSE	canonical	3	218	junction_3	19.2238278070616	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGACTTACATGTGGTTCAT	-82258477	True	NA	NA	False	AATAAA	-21	NA	82262737	82251800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_82252776_82259087_82259156_82261687_82261798_82262613
transcript_49735.known	chr15	+	445	4	FSM	ENSG00000188659.10	ENST00000562097.5	445	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	2.05480466765633	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTCTCTCCTTATGTAGC	82262526	True	NA	0	True	AATAAA	-11	NA	82262826	82264881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82263138_82263189_82263358_82263439_82264672
transcript_49740.known	chr15	+	404	3	FSM	ENSG00000188659.10	ENST00000566861.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	82262525	True	NA	8	True	AATAAA	-19	NA	82262825	82264889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82263358_82263439_82264672
transcript_49744.known	chr15	+	340	2	FSM	ENSG00000188659.10	ENST00000566205.1	340	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	82262509	True	NA	8	True	AATAAA	-19	NA	82262809	82264889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82262933_82264672
transcript_49745.nic	chr15	+	415	2	ISM	ENSG00000188659.10	ENST00000682753.1	3304	4	-40	19099	-32	80	5prime_fragment	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTGTTCAGTTGATTT	82262477	True	NA	NA	False	AATAAA	-19	NA	82262777	82265828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_82262933_82265568
transcript_49746.known	chr15	+	262	2	FSM	ENSG00000188659.10	ENST00000565006.1	262	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTATGTAGCTCTCTTCT	82262843	False	NA	8	True	AATAAA	-19	NA	82263143	82264889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82263189_82264672
transcript_49747.known	chr15	+	551	2	FSM	ENSG00000188659.10	ENST00000569120.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATATTTAGTAACTATT	82262517	True	NA	NA	False	AAGAAA	-44	NA	82262817	82265748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82263189_82265568
transcript_49752.nic	chr15	+	1274	6	NIC	ENSG00000259429.5	novel	648	5	NA	NA	-84	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	11.7029910706622	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAAAGCTAAGCAT	NA	False	NA	NA	False	GATAAA	-19	NA	82355057	82416003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_82355375_82400659_82400717_82404611_82404752_82408287_82408368_82414600_82414805_82415527
transcript_49758.nnic	chr15	-	1239	5	Fusion	ENSG00000237550.6_ENSG00000182774.13	novel	488	5	NA	NA	2	-1	intron_retention	FALSE	canonical	0	0	junction_1	5966.39017224821	26431	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTTCAAGCACAATA	-82540129	False	NA	-5	True	AATAAA	-32	NA	82540140	82372196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_82372947_82536724_82536882_82538305_82538372_82538879_82538986_82539980
transcript_49767.known	chr15	-	636	2	FSM	ENSG00000237550.6	ENST00000418824.3	636	2	0	0	0	0	multi-exon	FALSE	canonical	2	36	junction_1	0	5784	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGTTCAAGCACAATAT	NA	False	NA	-4	True	AATAAA	-33	NA	82372912	82372195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82372417_82372497
transcript_49768.known	chr15	-	579	1	FSM	ENSG00000237550.6	ENST00000466501.1	579	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1664	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATCTAAGAGTTACCTGGCT	NA	False	NA	NA	False	AAAAAG	-27	NA	82372888	82372309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82372300_82372900
transcript_49769.known	chr15	-	2459	11	FSM	ENSG00000214575.10	ENST00000618449.4	2459	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	5.7	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAATTTTTTGTT	NA	False	NA	NA	False	NA	NA	NA	82571823	82543833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553451_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82571633
transcript_4977.known	chr1	-	1025	9	FSM	ENSG00000178922.18	ENST00000372434.5	1025	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	17.3092280301578	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATATGTCTCTGTAATGG	-43453815	False	375	-4	True	ATTAAA	-19	NA	43453825	43451153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43451312_43451409_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43452902_43453005_43453412_43453498_43453594
transcript_49770.known	chr15	-	1919	11	FSM	ENSG00000214575.10	ENST00000611163.4	1919	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	6.04069532421558	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-82571734	True	NA	NA	False	NA	NA	NA	82571759	82544294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82544703_82546440_82546522_82547142_82547238_82549459_82549659_82552479_82552617_82553466_82553557_82553877_82553992_82555869_82556123_82557759_82557987_82571343_82571533_82571633
transcript_4978.known	chr1	-	1066	8	FSM	ENSG00000178922.18	ENST00000372432.5	1066	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	6.94291593155592	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTCATATGTCTCTGTA	-43453588	True	NA	-8	True	ATTAAA	-15	NA	43453963	43451157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43451312_43451427_43451545_43451647_43451718_43451797_43451848_43451934_43452014_43452204_43452320_43453385_43453498_43453594
transcript_49789.known	chr15	-	488	5	FSM	ENSG00000182774.13	ENST00000647841.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_4	1855.80636112715	485269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCATCTTTGCAGT	-82433674	True	NA	-10	True	AATAAA	-18	NA	82540457	82536749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_4979.known	chr1	+	1601	5	FSM	ENSG00000198198.17	ENST00000357658.4	1601	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	4.02336923485777	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTTAAATCTAAGACCTC	43388874	True	NA	NA	False	NA	NA	NA	43389950	43410577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43389996_43403176_43403303_43403600_43403775_43404379_43404551_43409492
transcript_49790.known	chr15	-	583	6	FSM	ENSG00000182774.13	ENST00000558397.1	583	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	6365.81570578351	1820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGCCTGTGTCATCTT	-82433654	True	NA	-16	True	AATAAA	-12	NA	82540437	82536755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82537921_82538043_82538305_82538372_82538879_82538986_82539980_82540133_82540425
transcript_49791.known	chr15	-	1909	4	FSM	ENSG00000182774.13	ENST00000561157.5	1909	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	2126.36878791573	2638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGCCTGTGTCATCTTT	-82433676	True	NA	-15	True	AATAAA	-13	NA	82540459	82536754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82538372_82538879_82538986_82539980_82540133_82540425
transcript_49792.known	chr15	-	522	5	FSM	ENSG00000182774.13	ENST00000561068.5	522	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6786.42411362567	1902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGCCTTGCCTGTGTCAT	-82540120	False	NA	-19	True	AATAAA	-9	NA	82540131	82536758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82538305_82538372_82538879_82538986_82539299_82539376_82539980
transcript_49793.known	chr15	-	932	4	FSM	ENSG00000182774.13	ENST00000560639.1	932	4	0	0	0	0	multi-exon	FALSE	canonical	3	9563	junction_3	1911.97390730685	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTGAATTTTTTCTGTA	-82433669	True	NA	-27	True	NA	NA	NA	82540452	82536808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82536882_82538305_82538986_82539980_82540133_82540425
transcript_49794.known	chr15	-	576	2	FSM	ENSG00000182774.13	ENST00000560229.6	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	13990	junction_1	0	487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGAGGTAAACTTTCTGG	-82433674	True	NA	NA	False	NA	NA	NA	82540457	82538886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82538986_82539980
transcript_49796.known	chr15	-	2650	18	FSM	ENSG00000103723.17	ENST00000660624.1	2650	18	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	6.65980038563248	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGCTGGCTCACCTTTCC	-82680137	True	NA	-3	True	AATAAA	-14	NA	82680407	82659281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82659711_82659844_82659984_82661824_82661923_82662167_82662253_82662693_82662923_82663126_82663234_82663559_82663621_82663800_82663976_82664366_82664491_82664834_82664944_82665456_82665576_82666746_82666934_82676460_82676638_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_49799.known	chr15	-	829	6	FSM	ENSG00000103723.17	ENST00000666894.1	829	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11.0526015037185	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTCTGGAGAGTAACATGG	-82680140	True	NA	NA	False	NA	NA	NA	82680410	82676950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82677166_82677273_82677384_82677670_82677804_82678104_82678168_82679728_82679801_82680174
transcript_4980.known	chr1	+	545	2	FSM	ENSG00000229348.1	ENST00000444386.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTATGCATTACTGCCAT	43453912	False	NA	NA	False	AATAAA	-16	NA	43453926	43456995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43454054_43456577
transcript_49804.nnic	chr15	-	572	4	Fusion	ENSG00000286817.1_ENSG00000259315.1	novel	1662	2	NA	NA	-90	1985	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGAAAGAGTCTGAAGTG	NA	False	NA	-5	True	AATAAA	-15	NA	82750545	82728804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_82728978_82738513_82738615_82739763_82739890_82750373
transcript_49805.nnic	chr15	-	545	4	Fusion	ENSG00000286817.1_ENSG00000259315.1	novel	537	2	NA	NA	-90	0	multi-exon	FALSE	canonical	1	1	junction_3	2.62466929133727	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTATTTGTGTGTCCTTGTT	NA	False	NA	-3	True	ATTAAA	-18	NA	82750545	82730789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_82730936_82738513_82738615_82739763_82739890_82750373
transcript_4981.known	chr1	+	2168	8	FSM	ENSG00000142949.17	ENST00000436724.5	2168	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	306.764551074465	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACAACTGTCTCCACCCAG	43517904	True	NA	NA	False	NA	NA	NA	43530902	43580078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43531091_43538197_43538278_43545030_43545167_43553491_43553638_43553799_43553942_43569589_43569779_43575909_43575928_43578809
transcript_49811.known	chr15	+	674	5	FSM	ENSG00000250988.7	ENST00000559366.1	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	24.6715929765388	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749806	True	NA	NA	False	AATAAA	-19	NA	82750583	82757206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903_82756940_82757045
transcript_4982.known	chr1	+	4486	22	FSM	ENSG00000066135.13	ENST00000372396.4	4486	22	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	38.993283915005	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCTGTCTGCCCCAAGGA	43645952	True	NA	11	True	AATAAA	-18	NA	43650148	43705518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43650253_43653136_43653314_43655590_43655767_43660297_43660413_43662893_43663088_43665695_43665746_43666451_43666556_43666953_43667092_43667771_43668020_43669099_43669300_43671504_43671876_43683683_43683805_43688913_43689096_43690844_43691050_43691495_43691573_43692255_43692312_43693993_43694103_43694708_43694895_43697842_43698014_43703616_43703737_43704019_43704113_43704229
transcript_49824.known	chr15	+	790	4	FSM	ENSG00000250988.7	ENST00000561107.5	790	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	9.56846672960488	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	82749794	True	NA	NA	False	AATAAA	-17	NA	82750571	82757204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628_82754785_82756729_82756786_82756903
transcript_49827.nic	chr15	+	554	4	NIC	ENSG00000250988.7	novel	790	4	NA	NA	-9	-119	intron_retention	FALSE	canonical	3	23	junction_1	18.4571575998762	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCTTTATGCTGAATAAT	82749777	True	NA	NA	False	AATAAA	-22	NA	82750554	82757085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_82750715_82754628_82754785_82756729_82756786_82756903
transcript_49828.nic	chr15	+	673	4	NIC	ENSG00000250988.7	novel	790	4	NA	NA	-9	0	intron_retention	FALSE	canonical	3	23	junction_1	18.4571575998762	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATACGTGTTGAGTTTTTAA	82749777	True	NA	NA	False	AATAAA	-17	NA	82750554	82757204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_82750715_82754628_82754785_82756729_82756786_82756903
transcript_49835.known	chr15	+	725	3	FSM	ENSG00000250988.7	ENST00000558174.5	725	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	33.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGTGTTGAGTTTTTAATC	82749805	True	NA	NA	False	AATAAA	-19	NA	82750582	82757206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628_82754785_82756903
transcript_49840.known	chr15	-	6418	13	FSM	ENSG00000186628.12	ENST00000334574.12	6418	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTCTAATCTTGCTG	NA	False	NA	NA	False	AATAAA	-19	NA	82806069	82755361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82759601_82762101_82762279_82765165_82765299_82765897_82766032_82768879_82769031_82769749_82769885_82772072_82772229_82778765_82778888_82780244_82780268_82782794_82783026_82786510_82786607_82786751_82787469_82805965
transcript_49841.known	chr15	+	594	2	FSM	ENSG00000250988.7	ENST00000544685.2	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTACAAAAAACAGTGTTGA	82749786	True	NA	NA	False	TATAAA	-9	NA	82750563	82754937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82750849_82754628
transcript_49842.known	chr15	-	1949	9	FSM	ENSG00000103942.13	ENST00000450735.7	1949	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	12.9903810567666	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-82951342	True	NA	-11	True	AATAAA	-17	NA	82952720	82848982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859136_82864166_82864260_82875272_82875405_82892684_82892842_82952530
transcript_49843.known	chr15	-	1990	9	FSM	ENSG00000103942.13	ENST00000304231.12	1990	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	30.2438010177292	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACACAGAATTTAGTG	-82951350	True	NA	-11	True	AATAAA	-17	NA	82952728	82848982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82849904_82851150_82851232_82852141_82852253_82854643_82854801_82859028_82859169_82864166_82864260_82875272_82875405_82892684_82892842_82952530
transcript_4986.known	chr1	-	686	5	FSM	ENSG00000236200.7	ENST00000439057.6	948	5	30	232	24	-83	multi-exon	FALSE	canonical	2	4	junction_1	4.43705983732471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCATGTCTACTAAAAATAC	-43707097	False	NA	NA	False	NA	NA	NA	43707341	43699922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43700064_43702655_43702729_43703563_43703648_43704352_43704458_43707058
transcript_49861.known	chr15	-	505	5	FSM	ENSG00000169609.14	ENST00000512638.5	505	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_1	67.6498337026781	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TGCAAAAAAAAAAAAAAGCA	-83008496	True	NA	NA	False	NA	NA	NA	83011549	82990560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82990656_82991955_82992047_83008547_83008676_83010236_83010364_83011485
transcript_49862.known	chr15	-	518	5	FSM	ENSG00000169609.14	ENST00000451195.7	518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	71.5978351628036	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGCTGACTCATCTATA	-83008554	True	NA	NA	False	AAAAAG	-11	NA	83011607	82990618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82990656_82991931_82992047_83008547_83008676_83010236_83010364_83011496
transcript_49867.known	chr15	+	1565	4	FSM	ENSG00000169612.4	ENST00000304191.4	1565	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_2	18.4028983224563	3004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGCAGTTAGCCCATT	82979282	True	NA	37	True	AATAAA	-34	NA	82986209	82991057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_82986370_82987335_82987385_82989009_82989189_82989880
transcript_49875.known	chr15	-	419	4	FSM	ENSG00000169609.14	ENST00000563387.5	419	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	67.2772043282286	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTCCACAACGGTTCTG	-83008490	True	NA	-12	True	ATTAAA	-5	NA	83011543	83004866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83004973_83008547_83008676_83010236_83010364_83011485
transcript_49886.known	chr15	-	11274	4	FSM	ENSG00000169609.14	ENST00000304177.10	11274	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.2646761734941	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCTTATATAATTTTTCA	-83008586	True	NA	-9	True	AATAAA	-20	NA	83011639	82994816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83005693_83008547_83008676_83010236_83010364_83011496
transcript_4990.known	chr1	-	3389	4	FSM	ENSG00000236200.7	ENST00000659644.2	3391	4	2	0	2	0	multi-exon	FALSE	canonical	2	10	junction_1	2.44948974278318	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAATGGCGTGAACCTGGG	-43707125	True	NA	NA	False	NA	NA	NA	43707369	43699839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43702729_43703563_43703648_43704352_43704458_43707058
transcript_49908.known	chr15	-	1881	3	FSM	ENSG00000169609.14	ENST00000505341.1	1881	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	28	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAGAAATAAAAAAT	-83008541	True	NA	-49	True	NA	NA	NA	83011594	83005297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83005693_83008547_83008676_83010236
transcript_49909.known	chr15	-	561	4	FSM	ENSG00000169609.14	ENST00000538348.6	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	88.3968325224383	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTCTCTCCAAATAATGAA	-83008554	True	NA	NA	False	ATTAAA	-18	NA	83011607	82988962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_82989158_83008547_83008676_83010236_83010364_83011496
transcript_49910.known	chr15	-	3194	8	FSM	ENSG00000064726.10	ENST00000261721.9	3194	8	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_4	53.9516034071656	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTATGTCATTTGCCT	-83063115	True	NA	NA	False	AATAAA	-26	NA	83067252	83016422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83018226_83018706_83018854_83020674_83020763_83030135_83030329_83041727_83041926_83050072_83050179_83056388_83056546_83066750
transcript_49911.known	chr15	+	1885	10	FSM	ENSG00000136404.16	ENST00000322019.14	1885	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	3.15445990368409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	83107558	True	NA	NA	False	ATTAAA	-30	NA	83107644	83137408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83121920_83122004_83122756_83122879_83124671_83124777_83126754_83126848_83127357_83127478_83136480
transcript_49913.known	chr15	+	1638	7	FSM	ENSG00000136404.16	ENST00000379390.10	1638	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	4.14996653266291	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTTTTAAAGAAAATTTGT	83107560	False	NA	NA	False	ATTAAA	-30	NA	83107571	83137408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83107773_83112796_83112901_83115844_83115943_83119577_83119682_83121920_83122004_83127357_83127478_83136480
transcript_49915.known	chr15	-	12538	6	FSM	ENSG00000166503.9	ENST00000299633.7	12538	6	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_5	38.7422250264489	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGGTGTGTAACCTTGG	-83207223	True	NA	NA	False	AATAAA	-15	NA	83207823	83127752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_83139276_83151214_83151362_83157414_83157574_83157902_83158042_83163998_83164076_83207330
transcript_4992.nic	chr1	-	692	3	ISM	ENSG00000236200.7	ENST00000659644.2	3391	4	-21	3555	-21	0	5prime_fragment	FALSE	canonical	2	13	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGCTATAACAAACTTAG	-43707148	True	NA	NA	False	NA	NA	NA	43707392	43703394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_43703648_43704352_43704458_43707058
transcript_49928.nic	chr15	-	660	4	ISM	ENSG00000166503.9	ENST00000299633.7	12538	6	272	29598	-10	0	5prime_fragment	FALSE	canonical	3	449	junction_3	19.6864307469779	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATGTGTTTATTGGG	-83203950	True	NA	-3	True	ATTAAA	-14	NA	83207551	83157350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_83157574_83157902_83158042_83163998_83164076_83207330
transcript_4993.known	chr1	-	416	2	FSM	ENSG00000236200.7	ENST00000418149.2	466	2	41	9	35	-9	multi-exon	FALSE	canonical	2	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGATAACTCGTTGCCGTT	-43707086	False	NA	NA	False	AATATA	-19	NA	43707330	43704313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43704458_43707058
transcript_49932.known	chr15	+	1647	9	FSM	ENSG00000140600.17	ENST00000563901.5	1647	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	27.7668867538296	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGGCCTTGGTTATTTTT	83445646	True	NA	18	True	AATAAA	-20	NA	83447375	83618739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83447579_83559252_83559322_83565133_83565207_83568535_83568673_83572564_83572699_83576582_83576742_83586982_83587087_83588661_83588772_83618081
transcript_49934.known	chr15	+	758	2	FSM	ENSG00000140600.17	ENST00000564054.1	758	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCGACATTCCTGAT	NA	False	NA	-30	True	AAGAAA	-13	NA	83609269	83618642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_83609467_83618081
transcript_4994.known	chr1	-	486	2	FSM	ENSG00000288573.2	ENST00000446167.2	800	2	299	15	-16	2	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCCTACCAAAATCATG	-43946276	False	NA	NA	False	ATTAAA	-18	NA	43946302	43944369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43944797_43946243
transcript_49940.known	chr15	+	347	3	FSM	ENSG00000259511.3	ENST00000637567.1	347	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTCGGTGAGGAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	84172972	84182076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84173075_84174007_84174158_84181981
transcript_49941.known	chr15	+	496	3	FSM	ENSG00000259511.3	ENST00000637853.1	496	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTACCTGGTTTCTCTT	NA	False	NA	NA	False	ATTAAA	-31	NA	84172492	84182234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84172586_84174007_84174158_84181981
transcript_4995.known	chr1	+	3883	20	FSM	ENSG00000117408.11	ENST00000372343.8	3883	20	0	0	0	0	multi-exon	TRUE	canonical	3	61	junction_14	17.6046141017953	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATGCATACATTTATTTA	43945290	True	NA	23	True	ATTAAA	-17	NA	43946949	43968022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43947685_43949416_43950154_43956319_43956461_43956559_43956702_43956809_43956977_43957194_43957316_43957401_43957550_43957976_43958159_43958241_43958269_43958460_43958596_43958745_43958890_43960248_43960330_43960875_43961014_43961165_43961263_43964268_43964322_43966574_43966642_43966723_43966783_43966929_43967020_43967314_43967497_43967585
transcript_4996.nic	chr1	+	1712	2	ISM	ENSG00000117408.11	ENST00000372343.8	3883	20	-27	17656	-27	821	5prime_fragment	FALSE	canonical	3	70	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTGACTCTCTTTTCCTT	43945263	True	NA	NA	False	ATTAAA	-29	NA	43946922	43950366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_43947685_43949416
transcript_49961.nnic	chr15	-	1141	8	NNC	ENSG00000189136.9	novel	1631	8	NA	NA	-31	16	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_7	2.99659670905758	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAATGAGAAAGGTAAAC	-84570816	False	NA	NA	False	NA	NA	NA	84570826	84527179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_84527478_84527618_84527668_84538531_84538617_84542144_84542285_84546220_84546278_84554965_84555071_84569504_84569684_84570598
transcript_49982.known	chr15	-	1915	8	FSM	ENSG00000177082.13	ENST00000398528.7	1915	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	28.0597031127471	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	-84654333	False	NA	NA	False	NA	NA	NA	84654343	84642767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_49983.known	chr15	-	5331	8	FSM	ENSG00000177082.13	ENST00000434634.7	5331	8	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_7	25.4990996239603	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGACCATCTCCCTAAAATG	-84650800	True	NA	-5	True	AATAAA	-20	NA	84654283	84639284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_49988.known	chr15	-	2063	8	FSM	ENSG00000177082.13	ENST00000559994.5	2063	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	33.4273504050507	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTGGGCATGGTGGCT	-84650797	True	NA	NA	False	NA	NA	NA	84654280	84642767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84645972_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654226
transcript_5.known	ERCC-00009	+	968	1	FSM	ERCC-00009A	DQ668364	968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4804	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00009_+_0_1000
transcript_50.known	ERCC-00097	+	506	1	FSM	ERCC-00097A	DQ516758	506	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00097_+_0_500
transcript_50008.nic	chr15	+	1123	5	NIC	ENSG00000176371.14	novel	910	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	60.1347445325911	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	84596795	True	NA	17	True	AATAAA	-18	NA	84601003	84623717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601136_84603819_84604334_84620601_84620773_84622645_84622715_84623480
transcript_50020.nnic	chr15	+	1121	4	NNC	ENSG00000176371.14	novel	906	3	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	60.1719757583766	87	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	84596795	True	NA	16	True	AATAAA	-17	NA	84601003	84616610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_84601136_84603819_84604334_84614654_84614828_84616308
transcript_50029.nnic	chr15	+	1174	4	NNC	ENSG00000176371.14	novel	906	3	NA	NA	-1	-4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	31.947874212014	71	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTTGCTTCCGAGC	84596795	True	NA	16	True	AATAAA	-17	NA	84601003	84616610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_84601189_84603819_84604334_84614654_84614828_84616308
transcript_50035.known	chr15	+	8975	4	FSM	ENSG00000176700.21	ENST00000348993.9	8975	4	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_1	0.816496580927726	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGGCTCTGAGTCTACTA	84631071	True	NA	2	True	ATTAAA	-15	NA	84631450	84647478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84632299_84637346_84637421_84638395_84638478_84639507
transcript_50037.known	chr15	-	528	4	FSM	ENSG00000177082.13	ENST00000558019.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	36.2981481009094	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACCGGAGTTGCTCCAGG	-84650800	True	NA	NA	False	NA	NA	NA	84654283	84648311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84648626_84652713_84652803_84653631_84653700_84654226
transcript_50038.known	chr15	+	993	3	FSM	ENSG00000176371.14	ENST00000334141.7	993	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	53.5	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596809	True	NA	15	True	AATAAA	-25	NA	84601017	84606889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601136_84603819_84604334_84606528
transcript_50039.known	chr15	+	906	3	FSM	ENSG00000176371.14	ENST00000379358.7	906	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_2	19.5	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596841	True	NA	20	True	AATAAA	-21	NA	84601049	84616614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601136_84603819_84604334_84616308
transcript_50041.known	chr15	+	2390	3	FSM	ENSG00000176371.14	ENST00000327179.6	2390	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	71.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTGGGCCGAGTCCTCAGA	84596841	True	NA	-29	True	NA	NA	NA	84601049	84622394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601136_84603819_84604331_84620601
transcript_50045.nic	chr15	+	1060	3	NIC	ENSG00000176371.14	novel	993	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_2	23.5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAGGAGTCCCTGCGTTT	84596795	True	NA	15	True	AATAAA	-25	NA	84601003	84606889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601189_84603819_84604334_84606528
transcript_50046.nic	chr15	+	1005	3	NIC	ENSG00000176371.14	novel	906	3	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	83	junction_1	10.5	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTTCCGAGCTCAT	84596795	True	NA	20	True	AATAAA	-21	NA	84601003	84616614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_84601189_84603819_84604334_84616308
transcript_50047.known	chr15	+	3813	3	FSM	ENSG00000176371.14	ENST00000448803.6	3813	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGAGTCTGTCTTTTAC	84596796	True	NA	16	True	AATAAA	-17	NA	84601004	84623716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84601189_84603819_84604334_84620601
transcript_50052.known	chr15	+	910	4	FSM	ENSG00000176371.14	ENST00000485222.2	910	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	49.0328687945364	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGAGTCTGTCTTTTACT	84603001	True	NA	17	True	AATAAA	-18	NA	84603900	84623717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84604334_84620601_84620773_84622645_84622715_84623480
transcript_50053.known	chr15	-	1180	5	FSM	ENSG00000177082.13	ENST00000560252.5	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	27.8691137282835	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTCTCTACTAAAAATACA	-84650815	True	NA	NA	False	NA	NA	NA	84654298	84647085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84647955_84648536_84648626_84652713_84652803_84653631_84653700_84654233
transcript_50054.known	chr15	+	965	3	FSM	ENSG00000176371.14	ENST00000541040.5	965	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGGGCCTGTGCTCAGAAT	84603001	True	NA	-64	True	NA	NA	NA	84603900	84623636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_84604334_84620601_84620773_84623275
transcript_50055.known	chr15	-	2140	7	FSM	ENSG00000177082.13	ENST00000559015.5	2140	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	26.9118932815958	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACAGGATTTCTGCTCCT	-84650797	True	NA	-8	True	AATAAA	-42	NA	84654280	84643054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84648626_84652713_84652803_84653631_84653700_84654233
transcript_50056.known	chr15	-	2031	7	FSM	ENSG00000177082.13	ENST00000559126.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	19.672315572906	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCCTAGTAGCAATTAAGG	-84650763	True	NA	-35	True	AATAAA	-15	NA	84654246	84643081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84643724_84645470_84645837_84646183_84646349_84647889_84647955_84648536_84648626_84652713_84652803_84653631
transcript_50058.known	chr15	-	655	3	FSM	ENSG00000197696.10	ENST00000360476.8	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_2	7.5	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATGCCTGGTCCTCTCCTT	-84656634	True	NA	-1	True	AATAAA	-18	NA	84658199	84655131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84655410_84657175_84657349_84657995
transcript_50065.known	chr15	-	1223	7	FSM	ENSG00000140612.14	ENST00000455959.7	1223	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	521.95362182222	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTGCACATTGAACCCC	-84693833	True	NA	-28	True	AATAAA	-2	NA	84716163	84669559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84714730_84714867_84716024
transcript_5008.known	chr1	+	944	7	FSM	ENSG00000117410.14	ENST00000236067.8	944	7	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	592.221078276986	684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCAGTGCAGCTTCTGTT	43966131	True	NA	2	True	AATAAA	-15	NA	43974947	43978289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43975108_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_50110.known	chr15	-	1079	6	FSM	ENSG00000140612.14	ENST00000268220.12	1079	6	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_5	54.6721135497797	21271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693809	True	NA	-12	True	AATAAA	-18	NA	84716139	84669543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_50111.known	chr15	-	882	5	FSM	ENSG00000140612.14	ENST00000558217.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	480.768330383772	1619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTTATCCCTGAATTGT	-84693733	True	NA	-13	True	AATAAA	-17	NA	84716063	84669544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84687624_84687775_84691534_84691645_84716024
transcript_50112.known	chr15	-	1256	5	FSM	ENSG00000140612.14	ENST00000559729.5	1256	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	485.525166700965	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAATTGTGTTTGTC	-84715641	False	NA	-6	True	AATAAA	-24	NA	84716460	84669537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84680712_84680833_84691534_84691645_84716024
transcript_50113.known	chr15	-	971	5	FSM	ENSG00000140612.14	ENST00000558134.5	971	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	484.643876985978	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693759	True	NA	-12	True	AATAAA	-18	NA	84716089	84669543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_50114.known	chr15	-	1089	7	FSM	ENSG00000140612.14	ENST00000560266.5	1089	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	526.254928718012	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTTATCCCTGAATTGTG	-84693781	True	NA	-12	True	AATAAA	-18	NA	84716111	84669543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_84670070_84670724_84670783_84679931_84679970_84680712_84680833_84687624_84687775_84691534_84691645_84716024
transcript_50117.known	chr15	-	3650	3	FSM	ENSG00000183655.13	ENST00000337975.6	3650	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	4	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTGCCTGCCTTGTGTG	-85792470	True	NA	-5	True	AATAAA	-15	NA	85794925	85759325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_85761012_85768016_85769821_85794765
transcript_50118.known	chr15	-	548	2	FSM	ENSG00000183655.13	ENST00000559131.1	548	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTGCCCTGCTGGGG	-85792463	True	NA	NA	False	GGGGCT	-27	NA	85794918	85760616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_85761012_85794765
transcript_50119.known	chr15	+	801	3	FSM	ENSG00000273540.5	ENST00000560803.2	801	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAGTTTTAGTGTGTTTGT	87038692	True	NA	NA	False	ATTAAA	-20	NA	87038716	87047303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_87038818_87042004_87042198_87046796
transcript_50120.known	chr15	+	1966	3	FSM	ENSG00000259527.2	ENST00000560153.2	1966	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTGGTGACGATCACGTC	87576834	True	NA	NA	False	AATAAA	-14	NA	87576928	87579866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_87577048_87577709_87577765_87578074
transcript_50123.known	chr15	-	3826	14	FSM	ENSG00000140538.16	ENST00000317501.7	3826	14	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	4.23566150705729	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTGAATCAGACCTCTTA	-88255684	False	NA	NA	False	AATAAA	-21	NA	88256159	87977363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_87979464_87981225_87981361_88032856_88033046_88126270_88126374_88127161_88127227_88128710_88128735_88135100_88135398_88135898_88136041_88136466_88136610_88137403_88137562_88147334_88147404_88183417_88183490_88184224_88184300_88255905
transcript_5013.known	chr1	+	2466	6	FSM	ENSG00000132768.14	ENST00000255108.8	2466	6	0	0	0	0	multi-exon	FALSE	canonical	3	349	junction_5	28.93717332429	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966060	True	NA	12	True	AATAAA	-15	NA	43970009	43973369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_50135.known	chr15	-	2315	6	FSM	ENSG00000140543.15	ENST00000564406.5	2315	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	18.3150211575089	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATATATGTGGTTGGATGA	-88545926	True	NA	NA	False	AATAAA	-21	NA	88546653	88512482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88536311_88536382_88546539
transcript_50141.known	chr15	-	2276	5	FSM	ENSG00000140543.15	ENST00000268148.13	2276	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	15.9765453086705	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGTGGTTGGATGACTG	-88545954	True	NA	NA	False	AATAAA	-24	NA	88546681	88512479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88513141_88516781_88516974_88527598_88527787_88530622_88531716_88546539
transcript_50149.known	chr15	-	670	3	FSM	ENSG00000259494.2	ENST00000560703.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	266.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGCTGCCTGTGGACGGTG	-88462324	True	NA	NA	False	NA	NA	NA	88467389	88459607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88459864_88464702_88464877_88467149
transcript_50151.known	chr15	-	986	4	FSM	ENSG00000259494.2	ENST00000312475.5	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_2	28.6472802664872	3152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTCTCAGCTGATTTG	-88462323	True	NA	-10	True	AATAAA	-15	NA	88467388	88459477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88459864_88464702_88464877_88465586_88465774_88467149
transcript_50152.known	chr15	+	3392	6	FSM	ENSG00000181991.16	ENST00000325844.9	3392	6	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	32.7987804651332	867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTACTGTCTCTTAATCAT	88462473	True	NA	5	True	AATAAA	-18	NA	88467707	88480776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_50153.known	chr15	+	458	3	FSM	ENSG00000181991.16	ENST00000560850.1	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	104.5	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGCATTTACCCTCCCA	88462473	True	NA	35	True	AATAAA	-14	NA	88467707	88472620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88468025_88472354
transcript_50154.known	chr15	+	766	5	FSM	ENSG00000181991.16	ENST00000353598.6	766	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	103.151284529084	609	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATAATTTTGAGATTTT	88462483	True	NA	12	True	AATAAA	-14	NA	88467717	88478259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88468025_88475109_88475240_88476988_88477055_88477871
transcript_50155.known	chr15	+	2002	6	FSM	ENSG00000181991.16	ENST00000559323.5	2002	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	96.6175967409664	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAATTTTGAGATTTTTTGC	88462471	True	NA	16	True	AATAAA	-18	NA	88467705	88478263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467907_88469146_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_50156.known	chr15	+	453	2	FSM	ENSG00000181991.16	ENST00000559125.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGAGTGAATGTGAGAT	88462443	True	NA	85	True	AGTAAA	-23	NA	88467677	88468258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88467783_88467910
transcript_50157.known	chr15	+	918	5	FSM	ENSG00000181991.16	ENST00000558406.5	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_3	27.0958945229716	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCGTGGCCTAGGCCCAA	88462501	True	NA	-42	True	NA	NA	NA	88467735	88478205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88468025_88472626_88472726_88475109_88475240_88476988_88477055_88477871
transcript_50161.nnic	chr15	+	1329	5	Fusion	ENSG00000181026.15_ENSG00000172183.16	novel	3072	4	NA	NA	-41	0	multi-exon	TRUE	canonical	2	4	junction_3	331.629593824194	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGTCCTCTTCTTAT	88610836	True	NA	33	True	AGTAAA	-26	NA	88621295	88655650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_+_88621383_88626145_88626750_88629225_88629427_88652109_88652311_88655414
transcript_50163.known	chr15	+	3072	4	FSM	ENSG00000181026.15	ENST00000332810.4	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	41.0636362518253	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGAAGTGGCCCTTCCTGT	88610880	True	NA	25	True	AATAAA	-18	NA	88621339	88632281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88621383_88626145_88626750_88629225_88629427_88630057
transcript_50164.nnic	chr15	+	1128	4	Fusion	ENSG00000181026.15_ENSG00000172183.16	novel	3072	4	NA	NA	-41	0	multi-exon	FALSE	canonical	2	9	junction_2	287.225811282111	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGGGTCCTCTTCTTAT	88610836	True	NA	33	True	AGTAAA	-26	NA	88621295	88655650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_+_88621383_88626145_88626750_88652109_88652311_88655414
transcript_50166.known	chr15	+	1242	2	FSM	ENSG00000181026.15	ENST00000557787.1	1242	2	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACAGGGCTTAAGGGGAAA	88610877	True	NA	NA	False	CATAAA	-2	NA	88621336	88627341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88621383_88626145
transcript_50169.known	chr15	+	1583	4	FSM	ENSG00000172183.16	ENST00000306072.10	1583	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	9.84321537348893	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAGCAATTTTTTTTTTT	88638910	True	NA	NA	False	AATAAA	-17	NA	88639015	88656483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88639077_88639342_88639595_88652109_88652311_88655414
transcript_50170.known	chr15	+	634	4	FSM	ENSG00000172183.16	ENST00000559876.2	634	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	12.9614813968157	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCATCCAGCCCGTTCC	88638847	True	NA	-86	True	NA	NA	NA	88638952	88655531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_88639077_88639342_88639595_88652169_88652311_88655414
transcript_50176.known	chr15	-	1547	6	FSM	ENSG00000140511.12	ENST00000562889.5	1547	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	87.9786337697966	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTGTAAAGCAAACAGAAC	-88893920	True	NA	NA	False	TTTAAA	-27	NA	88895597	88877830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88892973_88893113_88895458
transcript_50177.known	chr15	-	1892	5	FSM	ENSG00000140511.12	ENST00000359595.8	1892	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	21.016362672927	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCAGCCCTTTTCTGTGT	-88893867	True	NA	-9	True	AATAAA	-25	NA	88895544	88877293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88878257_88878966_88879270_88881356_88881726_88887174_88887346_88895458
transcript_50178.known	chr15	-	1989	9	FSM	ENSG00000140545.15	ENST00000558018.5	1989	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	418.905941113277	2538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-88896557	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88912123_88912177_88913246
transcript_5018.known	chr1	+	2414	6	FSM	ENSG00000132768.14	ENST00000495421.1	2414	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	145.978902585271	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGTTTCTTTTTAAT	43966060	True	NA	12	True	AATAAA	-15	NA	43970009	43973369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43970271_43970595_43970709_43970965_43971190_43971386_43972071_43972157_43972335_43972414
transcript_50180.known	chr15	-	1936	8	FSM	ENSG00000140545.15	ENST00000268150.13	1936	8	0	0	0	0	multi-exon	FALSE	canonical	3	918	junction_3	48.0616101202086	2547	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGGTGTGGTTCGTTAT	-88896557	True	NA	-5	True	AATATA	-20	NA	88913379	88898682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88899533_88899655_88899812_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_50182.known	chr15	-	1752	7	FSM	ENSG00000140545.15	ENST00000268151.11	1752	7	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	336.038894904874	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAAATATATTTATCTTC	-88896559	True	NA	-35	True	NA	NA	NA	88913381	88898712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_88899533_88901550_88901736_88905756_88905902_88906625_88906779_88907194_88907377_88909791_88909924_88913246
transcript_50183.known	chr15	+	597	4	FSM	ENSG00000260123.2	ENST00000565938.1	597	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.88561808316413	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGGTCTCTGGAAAGATG	89041102	False	NA	NA	False	AATATA	-14	NA	89041222	89082819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89041301_89070090_89070192_89075295_89075385_89082490
transcript_50185.known	chr15	+	8424	11	FSM	ENSG00000140526.18	ENST00000352732.10	8424	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_6	5.76541412215983	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGCTATGTGTCCTTTG	89086248	True	NA	11	True	AATAAA	-14	NA	89088455	89202355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89088564_89113724_89113825_89116321_89116522_89151676_89151853_89155366_89155535_89175811_89175996_89185423_89185517_89188192_89188304_89191079_89191150_89193234_89193320_89195226
transcript_50189.known	chr15	+	4733	38	FSM	ENSG00000140525.19	ENST00000310775.12	4733	38	0	0	0	0	multi-exon	TRUE	canonical	3	226	junction_1	75.7324401004262	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTGTGGTTGAAGTAGG	89236513	True	NA	19	True	AATAAA	-16	NA	89243978	89317131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398_89268526_89273376_89273470_89274167_89274305_89276710_89276892_89278686_89278775_89281169_89281301_89281764_89281836_89283135_89283251_89285095_89285219_89290212_89290282_89291612_89291715_89292687_89292865_89292941_89293064_89293832_89293998_89294914_89295095_89299799_89299967_89300299_89300386_89301325_89301443_89303863_89303916_89305114_89305243_89305340_89305410_89305604_89305699_89306006_89306195_89307475_89307530_89307612_89307673_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_50221.nic	chr15	+	1092	10	ISM	ENSG00000140525.19	ENST00000674831.1	4239	39	4	47840	0	0	5prime_fragment	FALSE	canonical	3	226	junction_1	106.385857223994	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236483	True	NA	8	True	AATAAA	-14	NA	89243948	89268631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_50223.nic	chr15	+	1119	10	NIC	ENSG00000140525.19	novel	3690	36	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	114.598278486628	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89236490	True	NA	8	True	AATAAA	-14	NA	89243955	89268631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_50229.nic	chr15	+	903	9	ISM	ENSG00000140525.19	ENST00000674831.1	4239	39	4	51820	0	0	5prime_fragment	FALSE	canonical	3	226	junction_1	112.584135205632	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTGTGTATTTTA	89236483	True	NA	8	True	AATAAA	-20	NA	89243948	89264651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521
transcript_50231.nic	chr15	+	930	9	NIC	ENSG00000140525.19	novel	1070	11	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	198	junction_1	121.380342312913	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTGTGTATTTTA	89236490	True	NA	8	True	AATAAA	-20	NA	89243955	89264651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902_89264027_89264521
transcript_50239.nnic	chr15	+	658	8	NNC	ENSG00000140525.19	novel	3690	36	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	209.108798944278	172	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236483	True	NA	22	True	AATAAA	-22	NA	89243948	89316481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_89244034_89247628_89247732_89258703_89258777_89260712_89260752_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_50241.nnic	chr15	+	685	8	NNC	ENSG00000140525.19	novel	3690	36	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	21	junction_4	213.318483751887	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236490	True	NA	22	True	AATAAA	-22	NA	89243955	89316481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260752_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_5025.known	chr1	+	1738	5	FSM	ENSG00000132768.14	ENST00000396758.6	1738	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	165.611744752599	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAACCTAAATAAACCAGA	43966075	False	NA	-17	True	NA	NA	NA	43970024	43973340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43970323_43970595_43970709_43970965_43971190_43972157_43972335_43972414
transcript_50253.nic	chr15	+	541	6	NIC	ENSG00000140525.19	novel	3690	36	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	239.509832783541	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTTGGGGCTTCTGCTTC	89236483	True	NA	22	True	AATAAA	-22	NA	89243948	89316481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_89244034_89247628_89247727_89312903_89312973_89314611_89314708_89315281_89315390_89316396
transcript_50256.known	chr15	-	3843	23	FSM	ENSG00000140521.17	ENST00000530292.3	3843	23	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	77.6904883719434	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAGACTCTATCTTC	-89333341	False	NA	-25	True	AATAAA	-8	NA	89333355	89316327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89316828_89317375_89317537_89317938_89318038_89318540_89318750_89318930_89319100_89319227_89319351_89320765_89321013_89321124_89321261_89321735_89321854_89321961_89322016_89322741_89322903_89323403_89323512_89323814_89323902_89324106_89324228_89325449_89325687_89326611_89326739_89326911_89327064_89327166_89327350_89328455_89328536_89328684_89328832_89328942_89329111_89330080_89330277_89333095
transcript_50263.known	chr15	+	526	5	FSM	ENSG00000140525.19	ENST00000570225.5	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	38.7362878964931	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGTGGAGGATCTC	89261825	True	NA	8	True	AATAAA	-14	NA	89261837	89268631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89261879_89263418_89263461_89263902_89264027_89264521_89264608_89268398
transcript_50264.known	chr15	+	700	8	FSM	ENSG00000140525.19	ENST00000563250.5	700	8	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	128.437549344546	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTGGTTCTCTCCTCCA	89236568	True	NA	NA	False	AAGAAA	-20	NA	89244033	89264004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89244068_89247628_89247732_89258703_89258777_89260712_89260844_89261584_89261742_89261820_89261879_89263418_89263461_89263902
transcript_50265.known	chr15	+	1109	1	FSM	ENSG00000261441.1	ENST00000569473.1	1109	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTTTTTTTTTTTT	89335026	True	NA	NA	False	AATACA	-17	NA	89335052	89336161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89335100_89336200
transcript_50266.known	chr15	-	1952	11	FSM	ENSG00000140519.14	ENST00000268122.9	1952	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.26885775404495	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTGAATGCTCCAATGG	-89496567	True	NA	NA	False	AATAAA	-24	NA	89496583	89471406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89471856_89472710_89472864_89476754_89476829_89477081_89477207_89477516_89477654_89477836_89477975_89479321_89479489_89480260_89480409_89483066_89483218_89486798_89486986_89496360
transcript_50270.nic	chr15	-	2306	2	ISM	ENSG00000166813.16	ENST00000445906.1	1375	5	-40	2239	-24	-2239	5prime_fragment	FALSE	canonical	3	34	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAACTTTTTAATGGCTAC	NA	False	NA	NA	False	NA	NA	NA	89655491	89650741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_89652955_89655398
transcript_50271.known	chr15	-	2708	3	FSM	ENSG00000166821.9	ENST00000300056.8	2708	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	5.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACTTGTGTCTGTGAGTG	-89690513	True	NA	-3	True	AATAAA	-14	NA	89690754	89681534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89683949_89686430_89686547_89690576
transcript_50273.known	chr15	-	905	2	FSM	ENSG00000166821.9	ENST00000559170.1	905	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGATGTGGGCAGAGATG	NA	False	NA	NA	False	NA	NA	NA	89690783	89683250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89683949_89690576
transcript_50274.known	chr15	-	978	3	FSM	ENSG00000166821.9	ENST00000561257.1	978	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATTGAAAGGAAAAAAT	-89690421	True	NA	-30	True	AATGAA	-2	NA	89690662	89683079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89683856_89686430_89686547_89690576
transcript_50275.known	chr15	+	1640	2	FSM	ENSG00000188095.6	ENST00000341735.5	1640	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGCCTTGTTTTT	NA	False	NA	NA	False	AAAAAG	-26	NA	89776331	89778754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_89777282_89778064
transcript_50277.known	chr15	-	1262	7	FSM	ENSG00000157823.17	ENST00000423566.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_4	213.713723367395	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGAACCAGAGTCACCCGC	-89888388	True	NA	NA	False	NA	NA	NA	89893977	89834981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89877305_89877425_89888520_89888633_89889048_89889141_89893880
transcript_50278.known	chr15	-	738	7	FSM	ENSG00000157823.17	ENST00000558011.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	207.380018859634	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATTTTGAGCCTTAGAAG	-89888405	True	NA	NA	False	NA	NA	NA	89893994	89835439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89878264_89878301_89888520_89888633_89889048_89889141_89893880
transcript_50279.known	chr15	-	578	6	FSM	ENSG00000157823.17	ENST00000558806.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	180.590143695607	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCTGCCAGAGATTCCTC	-89888439	True	NA	NA	False	AAAACA	-2	NA	89894028	89835593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89835644_89837614_89837723_89871474_89871547_89888520_89888633_89889048_89889137_89893880
transcript_50281.known	chr15	-	7587	6	FSM	ENSG00000242498.8	ENST00000357484.10	7587	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	4.88262224629348	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCTGAGTCTAATGTTTTAT	-89912168	True	NA	NA	False	CATAAA	-16	NA	89912952	89895005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_89901804_89903215_89903380_89903776_89903984_89908279_89908413_89910743_89910820_89912743
transcript_50287.known	chr15	-	1168	2	FSM	ENSG00000259291.2	ENST00000558334.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATATTGTTTACGTGATCT	-90082186	False	NA	NA	False	AATAAA	-19	NA	90082207	90074514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90074914_90081438
transcript_50288.known	chr15	-	2658	11	FSM	ENSG00000182054.10	ENST00000330062.8	2658	11	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_8	45.1819654286973	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTGTCCTCTGCATAGTA	-90099104	True	NA	-15	True	AATAAA	-30	NA	90102468	90083044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90090478_90090645_90091552_90091645_90102275
transcript_50290.known	chr15	-	1449	9	FSM	ENSG00000182054.10	ENST00000560061.1	1449	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	157.928336200316	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGCTCTTCACAAAATT	-90099104	True	NA	-21	True	NA	NA	NA	90102468	90083995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90084354_90084815_90084909_90085000_90085099_90085274_90085388_90087111_90087264_90087438_90087576_90088358_90088503_90088586_90088748_90102275
transcript_50294.known	chr15	+	1226	8	FSM	ENSG00000284626.1	ENST00000641334.1	1226	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.0548017179869	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGCCGCTTTCACTATT	90233742	True	NA	NA	False	AGTAAA	-20	NA	90234226	90263547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90234293_90234521_90234597_90238491_90238549_90244117_90244218_90251553_90251595_90253248_90253368_90262005_90262192_90262965
transcript_50295.known	chr15	-	906	8	FSM	ENSG00000185043.12	ENST00000650306.1	906	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	233.472805740643	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	-90228534	True	NA	-38	True	AATAAA	-16	NA	90233960	90230249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90231683_90231789_90232218_90232328_90233668_90233704_90233918
transcript_50300.nic	chr15	-	986	7	NIC	ENSG00000185043.12	novel	906	8	NA	NA	-98	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	187.588201476887	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTATGTGTGACATGAGAT	NA	False	NA	-38	True	AATAAA	-16	NA	90234145	90230249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233918
transcript_50313.known	chr15	+	5258	5	FSM	ENSG00000183208.13	ENST00000559204.6	5258	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.84700778176325	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	90233713	True	NA	NA	False	AGTAAA	-23	NA	90234197	90245811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90234293_90234521_90234597_90236062_90236182_90238491_90238549_90240899
transcript_50320.known	chr15	+	5128	4	FSM	ENSG00000183208.13	ENST00000329600.8	5128	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	5.35412613473634	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCAGCTATTTATATGC	90233724	True	NA	NA	False	AGTAAA	-23	NA	90234208	90245811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90234293_90234521_90234597_90238491_90238549_90240899
transcript_50336.known	chr15	-	1141	7	FSM	ENSG00000185043.12	ENST00000328649.11	1141	7	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_2	44.0293462741991	1627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATCTGAAGAATTAAAAAC	-90228515	True	NA	-2	True	AGTAAA	-16	NA	90233941	90229974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90230506_90230933_90231023_90231094_90231214_90231356_90231508_90232218_90232328_90233668_90233704_90233834
transcript_50337.known	chr15	+	1340	3	FSM	ENSG00000182768.9	ENST00000379095.5	1340	3	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_1	713.5	1297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCTTTGGTGCTCTTTG	90245755	True	NA	11	True	AATAAA	-17	NA	90265671	90272211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90265877_90266287_90266399_90271187
transcript_50338.known	chr15	+	2784	2	FSM	ENSG00000182768.9	ENST00000331497.3	2784	2	0	0	0	0	multi-exon	FALSE	canonical	3	1710	junction_1	0	889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTATCAATTATTATTG	90245742	True	NA	NA	False	ATTAAA	-16	NA	90265658	90273231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90266399_90271187
transcript_50339.known	chr15	+	541	5	FSM	ENSG00000196391.11	ENST00000560038.5	541	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAGAAGGGCAACATGGAA	90352040	True	NA	NA	False	NA	NA	NA	90352302	90360178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90352412_90354641_90354765_90355350_90355417_90358850_90358958_90360042
transcript_50341.known	chr15	+	5613	5	FSM	ENSG00000196391.11	ENST00000379090.9	5613	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.34520787991171	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAACACTTCTCCAGAGATT	90352077	True	NA	NA	False	AATAAA	-20	NA	90352339	90369146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90352412_90354641_90354765_90358850_90358958_90362544_90362642_90363932
transcript_50343.nnic	chr15	+	672	4	NNC	ENSG00000196391.11	novel	3163	4	NA	NA	-35	-149	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.29983164553722	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGCGGTTGAATTAAGTG	90351986	True	NA	NA	False	AATAAA	-19	NA	90352248	90359918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_90352412_90354641_90354765_90358850_90358958_90359639
transcript_50344.known	chr15	+	3163	4	FSM	ENSG00000196391.11	ENST00000354377.8	3163	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.94392028877595	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAAGAAAATTTTGGCTAA	90352021	True	NA	27	True	TATAAA	-43	NA	90352283	90362847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90352412_90354641_90354765_90358850_90358958_90360042
transcript_50347.known	chr15	+	1201	2	FSM	ENSG00000140575.13	ENST00000559809.2	1201	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTGTGTGTGTATGTGTG	90377226	True	NA	9	True	AATAAA	-28	NA	90388354	90391932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90388397_90390773
transcript_50352.nnic	chr15	-	921	3	NNC	ENSG00000259736.1	novel	502	3	NA	NA	-46	34959	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAACGGAAAACTGCTGTT	-90716832	True	NA	NA	False	AATAAA	-20	NA	90717187	90678033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_90678615_90713166_90713300_90716980
transcript_50355.known	chr15	-	502	3	FSM	ENSG00000259736.1	ENST00000558105.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGCATTTTCCCATAGAGA	-90716694	True	NA	NA	False	ATTAAA	-16	NA	90717049	90712992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90713300_90714920_90715043_90716976
transcript_50360.known	chr15	+	5240	22	FSM	ENSG00000197299.13	ENST00000355112.8	5240	22	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_9	27.5337764125703	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAGACCATTCTTTTGCC	90711418	True	NA	NA	False	AATAAA	-16	NA	90717345	90816166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593_90761256_90762965_90763158_90765295_90765415_90766909_90767024_90769132_90769232_90769437_90769587_90782821_90782929_90784920_90785082_90790648_90790845_90794166_90794358_90798189_90798338_90803520_90803721_90804166_90804360_90809136_90809260_90811204_90811407_90815101
transcript_50365.nic	chr15	+	1662	7	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-36	51039	-19	95	5prime_fragment	FALSE	canonical	3	195	junction_6	9.23158828275082	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAAGCTCTTATTTCCCAG	90711399	True	NA	NA	False	NA	NA	NA	90717326	90760917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90717441_90747388_90747491_90749366_90750068_90751786_90751947_90754810_90754939_90760146_90760280_90760593
transcript_5037.known	chr1	-	2044	4	FSM	ENSG00000285649.1	ENST00000647729.1	2044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTCTATAGCCCTCCTC	NA	False	NA	NA	False	AATACA	-13	NA	43974821	43968350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43969644_43970040_43970308_43973363_43973469_43974442
transcript_50371.nic	chr15	+	211	2	ISM	ENSG00000197299.13	ENST00000681142.1	4270	22	-36	64471	-19	-2475	5prime_fragment	FALSE	canonical	3	216	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCGTAAGTGTTTTGACT	90711399	True	NA	5	True	AATAAA	-22	NA	90717326	90747485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_90717441_90747388
transcript_50372.known	chr15	+	402	2	FSM	ENSG00000259704.3	ENST00000558221.2	430	2	26	2	10	-2	multi-exon	FALSE	canonical	2	3	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTATTCTACTCCTAAA	90839656	True	NA	NA	False	ATTAAA	-19	NA	90839723	90841378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90839901_90841153
transcript_50373.nnic	chr15	+	584	3	NIC	ENSG00000182511.12	novel	2737	19	NA	NA	3466	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	30	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTCCTGGCATGTGCACTC	90892735	False	NA	7	True	AATAAA	-20	NA	90893314	90895776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_90893415_90893935_90894059_90895415
transcript_50374.known	chr15	+	587	5	FSM	ENSG00000182511.12	ENST00000559355.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	17.0733710789639	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTATGTGCGCAGCCT	90883889	True	NA	NA	False	NA	NA	NA	90884468	90887209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90884545_90885041_90885259_90885411_90885586_90886960_90887058_90887186
transcript_50376.known	chr15	+	4002	23	FSM	ENSG00000140553.18	ENST00000672480.1	4002	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	113.611169934493	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	NA	False	NA	26	True	AATAAA	-17	NA	90930179	90954093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90930256_90933976_90934144_90934338_90934550_90934943_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_50378.known	chr15	+	3252	20	FSM	ENSG00000140553.18	ENST00000418476.2	3252	20	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	40.6274200216766	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCCCTGTCCTTGGG	90927005	True	NA	26	True	AATAAA	-17	NA	90935284	90954093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90935376_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942436_90942606_90942911_90943083_90944891_90945064_90946613_90946915_90947795_90947891_90948141_90948284_90948653_90948795_90949315_90949444_90949653_90949721_90950153_90950268_90950499_90950616_90952928_90953047_90953154_90953311_90953458
transcript_5038.known	chr1	+	987	8	FSM	ENSG00000117410.14	ENST00000472174.7	987	8	0	0	0	0	multi-exon	FALSE	canonical	3	1545	junction_7	70.2444710584806	12035	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGCTTCTGTTGCCCTC	43966143	True	NA	8	True	AATAAA	-21	NA	43974959	43978295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43975108_43975799_43975849_43976089_43976174_43976301_43976380_43976589_43976660_43976772_43976825_43977025_43977217_43977980
transcript_50387.known	chr15	+	855	7	FSM	ENSG00000140553.18	ENST00000553671.6	855	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	118.486872221731	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTGATATAGTTCACAAAA	90927005	True	NA	NA	False	NA	NA	NA	90935284	90943084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_90935331_90935543_90935706_90935945_90935983_90936284_90936461_90939730_90939824_90940305_90940474_90942911
transcript_5039.known	chr1	+	419	4	FSM	ENSG00000117410.14	ENST00000498208.1	419	4	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_1	751.622245546258	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTCAGGGTCCTTGG	43975066	False	NA	NA	False	NA	NA	NA	43975099	43976379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43975308_43975799_43975849_43976089_43976174_43976301
transcript_50401.known	chr15	-	457	4	FSM	ENSG00000184508.12	ENST00000561036.1	457	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	79.432710866214	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACCGGCAACTGGAAGAG	-90930519	True	NA	NA	False	GGGGCT	-9	NA	90932476	90931336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932385
transcript_50406.known	chr15	-	1856	4	FSM	ENSG00000184508.12	ENST00000394272.8	1856	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	11.0855260988773	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTCTGGAAAAGCGATCA	-90930592	True	NA	-18	True	ATTAAA	-16	NA	90932549	90929967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931406_90931703_90931945_90932054_90932111_90932428
transcript_50407.known	chr15	-	1047	4	FSM	ENSG00000184508.12	ENST00000330334.7	1047	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	72.3202753190433	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930589	True	NA	-8	True	AATAAA	-17	NA	90932546	90930924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931557_90931703_90931945_90932054_90932111_90932428
transcript_50408.known	chr15	-	1220	3	FSM	ENSG00000184508.12	ENST00000494993.1	1220	3	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_1	0.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTAAGCTGCTGCTGCTC	-90930595	True	NA	-8	True	AATAAA	-17	NA	90932552	90930924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90931406_90931703_90931945_90932054
transcript_5041.known	chr1	-	3206	14	FSM	ENSG00000196517.13	ENST00000372310.8	3206	14	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	5.86434417001413	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGCTGTGCTTTGTCT	-44031451	False	NA	0	True	AATGAA	-21	NA	44031462	43996482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_43997740_43997854_43998026_44000766_44000868_44000955_44001056_44001163_44001299_44001389_44001628_44002312_44002417_44002511_44002647_44002852_44002986_44008352_44008624_44009964_44010097_44010725_44010883_44024247_44024363_44031305
transcript_50410.known	chr15	-	2501	23	FSM	ENSG00000184056.15	ENST00000333371.8	2501	23	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_17	14.6203328358627	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTGGTCGTTCTGGACA	-91021153	True	NA	-1	True	AATAAA	-21	NA	91022594	90998672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90999055_90999676_90999794_90999899_90999976_91000489_91000592_91001388_91001463_91002049_91002183_91003084_91003132_91004876_91004932_91005054_91005120_91005379_91005455_91005693_91005785_91005972_91006060_91006371_91006446_91006651_91006730_91006949_91007047_91007468_91007574_91007869_91007965_91009800_91009847_91013803_91013872_91014383_91014434_91016962_91017025_91017804_91017886_91022153
transcript_50419.known	chr15	-	3072	15	FSM	ENSG00000198901.14	ENST00000394249.8	3072	15	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	118.0140297782	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90986059	True	NA	-4	True	AATAAA	-30	NA	90994535	90966039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90967203_90969078_90969121_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_50422.nnic	chr15	-	2635	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	-85	2	combination_of_known_splicesites	FALSE	canonical	3	50	junction_1	91.3476356155121	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATAGTGTGGTGTTTCCTTT	-90994666	False	NA	-2	True	AATAAA	-32	NA	90994687	90966037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90966654_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_50424.nic	chr15	-	3105	14	NIC	ENSG00000198901.14	novel	3072	15	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	128	junction_1	73.3007906994172	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATATAGTGTGGTGTTTCCT	-90994666	False	NA	-4	True	AATAAA	-30	NA	90994687	90966039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90967203_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_50425.nic	chr15	-	2546	14	NIC	ENSG00000198901.14	novel	4087	14	NA	NA	-85	0	combination_of_known_junctions	FALSE	canonical	3	101	junction_1	79.3963914938741	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCAAAAAGATATAGTGT	-90994666	False	NA	-14	True	AATAAA	-20	NA	90994687	90966049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_90966654_90969523_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_50426.known	chr15	-	4087	14	FSM	ENSG00000198901.14	ENST00000361188.9	4087	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	85.1934797627309	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATAAATTAAAATCTGTA	NA	False	NA	-41	True	AATATA	-13	NA	90995629	90966076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90967203_90969446_90969624_90970403_90970515_90974135_90974247_90974584_90974732_90976675_90976772_90979157_90979295_90980241_90980390_90980883_90981034_90981498_90981670_90981747_90981982_90984017_90984141_90984692_90984826_90994406
transcript_50439.known	chr15	-	933	5	FSM	ENSG00000198901.14	ENST00000557763.5	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_2	21.9715725427198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGCTGTGGCCACCAT	-90986028	True	NA	NA	False	NA	NA	NA	90994504	90980937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_90981034_90981498_90981982_90984017_90984141_90984692_90984826_90994406
transcript_50441.known	chr15	+	563	4	FSM	ENSG00000214432.9	ENST00000556904.5	563	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGATTTTTGAGACTC	91022596	True	NA	NA	False	NA	NA	NA	91022618	91030706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_91022741_91023312_91023595_91030130_91030242_91030658
transcript_50443.known	chr15	+	435	1	FSM	ENSG00000278514.1	ENST00000620171.1	435	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAATGTGTGGATCTT	91022743	False	NA	NA	False	AATAAA	-28	NA	91022765	91023200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_91022800_91023200
transcript_50445.nnic	chr15	-	596	2	Intergenic	novelGene_14	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGGTCTTCCAGGTTAT	NA	False	NA	NA	False	TATAAA	-24	NA	92163941	92163105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr15_-_92163489_92163728
transcript_50447.nnic	chr15	-	540	2	Intergenic	novelGene_15	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGAGTTCAGCCCTCCTT	NA	False	NA	NA	False	AAGAAA	-23	NA	92163941	92163161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr15_-_92163489_92163728
transcript_50450.known	chr15	-	567	4	FSM	ENSG00000185442.13	ENST00000557398.2	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	62.4731053245226	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGCTCAGACTGTCACTG	-92809645	True	NA	NA	False	TATAAA	-28	NA	92809798	92619301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_92619460_92630213_92630346_92699039_92699164_92809645
transcript_50452.known	chr15	-	2604	3	FSM	ENSG00000185442.13	ENST00000327355.6	2604	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	5.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGAGTACCTTGGGCTTG	-92653493	True	NA	-8	True	AATAAA	-18	NA	92655775	92617447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_92619460_92630213_92630346_92655315
transcript_50455.known	chr15	-	409	2	FSM	ENSG00000185442.13	ENST00000554082.1	409	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTGCCTCGAGGTATTTT	-92809731	True	NA	NA	False	ATTAAA	-16	NA	92809884	92808843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_92809014_92809645
transcript_50456.known	chr15	-	2794	2	FSM	ENSG00000258741.5	ENST00000671695.1	2794	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTATAAGTGAGAACATAT	-92734060	True	NA	NA	False	NA	NA	NA	92734205	92713476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_92716050_92733984
transcript_50457.known	chr15	+	2232	13	FSM	ENSG00000173575.22	ENST00000420239.7	2232	13	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	7.7723691511805	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTCCTGGGAGTTTTTAT	92895052	True	NA	8	True	AATAAA	-17	NA	92900323	92949234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951
transcript_50459.known	chr15	+	7764	38	FSM	ENSG00000173575.22	ENST00000626874.2	7764	38	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_17	9.40688090321368	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCACAGTTCCGCAGGCTGT	92900166	False	NA	NA	False	NA	NA	NA	92900188	93022162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92900825_92901166_92901300_92924320_92924553_92927243_92927331_92929029_92929092_92937517_92937626_92939577_92939719_92941821_92941956_92942842_92943069_92944414_92944516_92945820_92945866_92946037_92946217_92948951_92949077_92953356_92953574_92955422_92955513_92956458_92956650_92967324_92967514_92971764_92971928_92972264_92972418_92974878_92974951_92978233_92978384_92979134_92979284_92980814_92980912_92981364_92981458_92984329_92984501_92985497_92985674_92991475_92991518_92992858_92992999_92996956_92997096_92997252_92997404_92998498_92998622_93000511_93000641_93002176_93002318_93004616_93004752_93009144_93009324_93012344_93012445_93014695_93014910_93020011
transcript_5046.known	chr1	+	1472	9	FSM	ENSG00000159214.13	ENST00000372318.8	1472	9	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	39.323776204734	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991466	True	NA	14	True	ATTAAA	-18	NA	43991598	43996528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43991747_43991846_43992005_43992211_43992388_43992522_43992640_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50462.known	chr15	+	1249	3	FSM	ENSG00000173575.22	ENST00000629346.2	1249	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	20.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGCTCCCTTGAGTGTA	92895052	True	NA	NA	False	ATTAAA	-16	NA	92900323	92902788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92900825_92901166_92901300_92902173
transcript_50463.known	chr15	+	1740	2	FSM	ENSG00000173575.22	ENST00000627622.1	1740	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGATGTGATTCATTATG	92895049	True	NA	NA	False	TATAAA	-21	NA	92900320	92902402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92900825_92901166
transcript_50464.nic	chr15	+	866	6	NIC	ENSG00000272888.8	novel	556	6	NA	NA	74	0	intron_retention	FALSE	canonical	3	183	junction_1	330.012363404767	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	92883053	False	NA	1	True	AATAAA	-2	NA	92883088	92898072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_92883187_92883584_92883779_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_50466.known	chr15	+	802	5	FSM	ENSG00000272888.8	ENST00000556895.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_1	146.443461786452	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGGCACACTAACCCAGATA	92882826	False	NA	-96	True	AAGAAA	-2	NA	92882861	92897975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_92883187_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_50468.nic	chr15	+	718	5	NIC	ENSG00000272888.8	novel	1776	4	NA	NA	385	0	combination_of_known_splicesites	FALSE	canonical	3	30	junction_1	364.254375402685	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	92883369	False	NA	1	True	AATAAA	-2	NA	92883399	92898072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_92883544_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_50471.nnic	chr15	+	762	5	NNC	ENSG00000272888.8	novel	1776	4	NA	NA	-394	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	372.361635376149	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTAACACTTAAAAATTT	92884897	False	NA	1	True	AATAAA	-2	NA	92884929	92898072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_92885118_92885514_92885585_92886168_92886255_92892003_92892073_92897723
transcript_50477.known	chr15	+	796	4	FSM	ENSG00000140563.16	ENST00000561608.5	796	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGGCATTCCTTAAAA	94231072	True	NA	NA	False	NA	NA	NA	94231571	94314344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_94231665_94278153_94278264_94298200_94298731_94314281
transcript_50479.known	chr15	+	1439	1	FSM	ENSG00000277654.6	ENST00000565166.3	1439	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	19	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTCCCATCAGAGGCCGG	94855458	False	NA	NA	False	NA	NA	NA	94855473	94856912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_94855500_94856900
transcript_50480.known	chr15	-	1354	4	FSM	ENSG00000258433.2	ENST00000653816.1	1354	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.12825877028341	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTCATGTGTTCAGA	-95046927	False	NA	NA	False	AATAAA	-21	NA	95047108	95034223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_95034745_95035383_95035739_95039431_95039524_95046722
transcript_50481.known	chr15	-	1358	3	FSM	ENSG00000258433.2	ENST00000554649.2	1358	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCCCAAGGTGACCAAAACA	-95046907	True	NA	NA	False	AAGAAA	-2	NA	95047088	95034107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_95034745_95035383_95035739_95046722
transcript_50482.nnic	chr15	-	893	2	NIC	ENSG00000258433.2	novel	1354	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGTCATGTGTTCAGA	-95046913	True	NA	NA	False	AATAAA	-21	NA	95047094	95034223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_95034745_95046722
transcript_50506.known	chr15	+	1149	5	FSM	ENSG00000259485.2	ENST00000656523.1	1149	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	18.364367672207	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTACACACTTGTGCTTT	97295065	True	NA	NA	False	AATAAA	-22	NA	97295836	97432089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97296324_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_50508.nnic	chr15	+	832	5	NNC	ENSG00000259485.2	novel	1149	5	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	17.1828402774396	79	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295802	97432086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97295976_97411191_97411279_97429048_97429205_97429769_97429890_97431790
transcript_50511.nnic	chr15	+	772	5	NNC	ENSG00000259485.2	novel	1149	5	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	19.710403344427	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	97295052	True	NA	NA	False	AATAAA	-19	NA	97295823	97432086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97295976_97296206_97296324_97411191_97411279_97429769_97429890_97431790
transcript_50517.known	chr15	+	956	4	FSM	ENSG00000259485.2	ENST00000655490.1	956	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	13.9283882771841	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACACACTTGTGCTTTT	97295103	True	NA	NA	False	AATAAA	-23	NA	97295874	97432090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97296324_97411191_97411279_97429769_97429890_97431790
transcript_5052.nic	chr1	+	1454	8	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	-1	0	intron_retention	FALSE	canonical	3	9	junction_1	35.8636875074588	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991029	True	NA	14	True	ATTAAA	-18	NA	43991772	43996528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992005_43992152_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50522.nnic	chr15	+	676	4	NNC	ENSG00000259485.2	novel	956	4	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	19.1891172861657	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295802	97432086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97295976_97411191_97411279_97429769_97429890_97431790
transcript_50531.known	chr15	+	798	3	FSM	ENSG00000259485.2	ENST00000659377.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	97295137	True	NA	NA	False	AATAAA	-19	NA	97295908	97432086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97296324_97411191_97411279_97431790
transcript_50532.nnic	chr15	+	1228	3	NNC	ENSG00000259485.2	novel	565	3	NA	NA	-66	18928	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	30.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTTATACATGTATATG	NA	False	NA	NA	False	AATAAA	-31	NA	97295770	97451022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_+_97296324_97411191_97411279_97450434
transcript_50536.nnic	chr15	+	920	3	NIC	ENSG00000259485.2	novel	956	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTTTACACACTTGTGC	NA	False	NA	NA	False	AATAAA	-19	NA	97295819	97432086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_97296324_97429769_97429890_97431790
transcript_50538.known	chr15	+	4062	8	FSM	ENSG00000140450.9	ENST00000268042.7	4062	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	11.1721227405812	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGAGGTGCTAGTTTT	97959664	True	NA	8	True	AATAAA	-14	NA	97960702	97973833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_97961169_97965599_97965667_97965894_97966043_97968013_97968117_97969122_97969380_97969882_97970046_97970588_97970744_97971130
transcript_50539.known	chr15	-	834	5	FSM	ENSG00000259199.2	ENST00000560360.2	834	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACCTTGCACCATTCACA	NA	False	NA	NA	False	NA	NA	NA	98293199	98038570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_98039019_98046666_98046740_98257578_98257669_98291611_98291701_98293065
transcript_50540.known	chr15	-	334	2	FSM	ENSG00000259424.2	ENST00000560221.1	334	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCGAGATAAGAAGTGGTT	-98647361	False	109	-12	True	AATAAA	-35	NA	98647371	98646950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_98647194_98647280
transcript_50542.known	chr15	+	459	1	FSM	ENSG00000278022.1	ENST00000618697.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTTTGATTAGGCTTT	98660198	False	NA	5	True	AATAAA	-14	NA	98660209	98660668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_98660200_98660700
transcript_50544.known	chr15	+	1008	3	FSM	ENSG00000278090.3	ENST00000665845.1	1008	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACATTTGTGTATGTGTT	NA	False	NA	NA	False	AATAAA	-17	NA	99014709	99031050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99014814_99024599_99024674_99030220
transcript_50557.known	chr15	+	967	10	FSM	ENSG00000168904.15	ENST00000561276.5	967	10	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	27.8288419529891	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTAGTTTTGTGGCTT	99249996	True	NA	NA	False	NA	NA	NA	99251519	99386035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99251542_99255897_99255974_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_50560.known	chr15	+	5852	10	FSM	ENSG00000168904.15	ENST00000301981.8	5852	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	8.84572854999784	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACGAGTTTTGTGGTGTTT	99249957	True	NA	NA	False	NA	NA	NA	99251480	99390729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_50566.known	chr15	+	1235	9	FSM	ENSG00000168904.15	ENST00000447360.6	1235	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	26.4516067564902	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	99249981	True	NA	13	True	AATATA	-20	NA	99251504	99386296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99386029
transcript_50569.nic	chr15	+	1414	9	NIC	ENSG00000168904.15	novel	5852	10	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_2	23.9361128840921	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTTGTCTTCTGTGTTT	99249921	True	NA	13	True	AATATA	-20	NA	99251444	99386296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_99251542_99255897_99256126_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99361335_99361512_99363105_99363266_99386029
transcript_50573.nic	chr15	+	1166	8	NIC	ENSG00000168904.15	novel	1235	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_7	29.1715544981191	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGTTTAATTATGTAAG	99249921	True	NA	NA	False	NA	NA	NA	99251444	99355719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_99251542_99255897_99256126_99276575_99276617_99287256_99287295_99287813_99287952_99333922_99334130_99352368_99352472_99355405
transcript_50597.known	chr15	-	559	5	FSM	ENSG00000183060.16	ENST00000450512.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	19.2142525225417	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACCCACAAAGAACTGAAA	-99731497	True	NA	NA	False	NA	NA	NA	99733437	99729631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99731172_99731199_99731357_99731408_99731717_99732008_99733344
transcript_5060.nnic	chr1	+	1277	8	NNC	ENSG00000159214.13	novel	1472	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	34.9343407446785	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991039	True	NA	14	True	ATTAAA	-18	NA	43991782	43996528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_43992005_43992319_43992388_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50600.nnic	chr15	-	1260	4	NNC	ENSG00000183060.16	novel	2847	5	NA	NA	1	-4773	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	18.8325958557674	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTATTTTTCTTTTTG	-99731480	True	NA	3	True	AATAAA	-31	NA	99733420	99720475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_99720967_99729328_99729732_99731717_99732008_99733344
transcript_50601.nnic	chr15	-	1089	4	NNC	ENSG00000183060.16	novel	2710	3	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	23.9211668240122	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731480	True	NA	0	True	AATAAA	-24	NA	99733420	99727404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_99727725_99729328_99729732_99731717_99732008_99733344
transcript_50606.nnic	chr15	-	614	3	NNC	ENSG00000183060.16	novel	2356	3	NA	NA	1	-4395	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	3	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTATTCATAGCACACACAC	-99731480	True	NA	NA	False	AATAAA	-30	NA	99733420	99720097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_99720453_99720783_99720967_99733344
transcript_50610.nnic	chr15	-	965	3	NNC	ENSG00000183060.16	novel	2710	3	NA	NA	6	-4773	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	6	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTATTTTTCTTTTTG	-99731475	True	NA	3	True	AATAAA	-31	NA	99733415	99720475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_99720967_99729328_99729732_99733344
transcript_50612.nnic	chr15	-	846	3	NIC	ENSG00000183060.16	novel	2356	3	NA	NA	1	-4784	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	22.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGAAACTTGTGTAT	-99731480	True	NA	-8	True	AATAAA	-20	NA	99733420	99720486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_99720967_99731717_99732008_99733344
transcript_50615.known	chr15	-	2672	3	FSM	ENSG00000183060.16	ENST00000409796.5	2672	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	20	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731399	True	NA	0	True	AATAAA	-24	NA	99733339	99727404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99731717_99732008_99733284
transcript_50616.known	chr15	-	2710	3	FSM	ENSG00000183060.16	ENST00000684762.1	2710	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATTCCCCCTTTTTATTT	-99731497	True	NA	0	True	AATAAA	-24	NA	99733437	99727404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99731717_99732008_99733344
transcript_50621.known	chr15	-	2222	2	FSM	ENSG00000183060.16	ENST00000496108.5	2222	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTTTCTTGCAATGGTG	NA	False	NA	NA	False	AATAAA	-17	NA	99733444	99715700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99717823_99733344
transcript_50623.nic	chr15	-	567	2	ISM	ENSG00000183060.16	ENST00000604213.1	2356	3	-29	4779	1	-4773	5prime_fragment	FALSE	canonical	3	11	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTATTTTTCTTTTTG	-99731480	True	NA	3	True	AATAAA	-31	NA	99733420	99720475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_-_99720967_99733344
transcript_50624.nnic	chr15	-	588	2	NIC	ENSG00000183060.16	novel	2356	3	NA	NA	-1	-4784	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGAAACTTGTGTAT	-99731452	True	NA	-8	True	AATAAA	-20	NA	99733392	99720486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_99720967_99733284
transcript_50625.known	chr15	-	2431	2	FSM	ENSG00000183060.16	ENST00000545021.2	2431	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCCCTTTTTATTTAATT	NA	False	NA	4	True	AATAAA	-28	NA	99733444	99727400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_99729732_99733344
transcript_50629.known	chr15	+	760	4	FSM	ENSG00000259363.6	ENST00000560059.6	760	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTACTTTAGGTGAAGA	NA	False	NA	NA	False	AATAAA	-23	NA	99806984	99839086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_99807099_99808146_99808303_99812972_99813087_99838710
transcript_50631.nnic	chr15	-	634	3	NNC	ENSG00000189419.8	novel	3564	2	NA	NA	417	-4454	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCATTTCAATCATTTGT	NA	False	NA	NA	False	AGTAAA	-19	NA	100350308	100348931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_100349094_100349307_100349389_100349917
transcript_50633.nnic	chr15	-	767	2	NNC	ENSG00000154227.14	novel	448	2	NA	NA	61756	0	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGGACTCAGACTGGTCA	NA	False	NA	0	True	AATATA	-26	NA	100417740	100402510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_100402866_100417328
transcript_50635.nnic	chr15	-	2392	7	NNC	ENSG00000140471.17	novel	4755	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	17.6131264181639	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGACATTTTATTTTCCAG	-100601252	True	NA	-6	True	AATAAA	-22	NA	100602184	100569234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_100570118_100571893_100572010_100573650_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602116
transcript_50641.known	chr15	+	4926	6	FSM	ENSG00000183475.13	ENST00000332783.12	4926	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.41848687365763	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTGGAGTTGTATTTTA	100601328	True	NA	18	True	ATTAAA	-22	NA	100602588	100651701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436_100630043_100648322
transcript_50642.nic	chr15	-	1632	6	NIC	ENSG00000140471.17	novel	2477	6	NA	NA	-15	338	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	15.9749804381727	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATGTGTTTATTGTTATT	-100601267	True	NA	NA	False	ATTAAA	-21	NA	100602199	100573076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_100573301_100573650_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602116
transcript_50644.known	chr15	+	1694	5	FSM	ENSG00000183475.13	ENST00000343276.4	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	5.97390157267426	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACAAGATTTCATAAAAAT	100601348	True	NA	NA	False	AATAAA	-19	NA	100602608	100630209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100603047_100603214_100603314_100609706_100609829_100612165_100612428_100629436
transcript_50645.nic	chr15	-	1677	5	NIC	ENSG00000140471.17	novel	1612	5	NA	NA	-110	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_4	12.3970762682174	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGTCAGCTTTTTGT	NA	False	NA	NA	False	AAAAAG	-19	NA	100602294	100573476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_-_100574242_100574986_100575129_100580262_100580353_100580443_100580946_100602116
transcript_50650.known	chr15	-	1196	5	FSM	ENSG00000140471.17	ENST00000560133.5	1196	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.3201142470194	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACATGTCAGCTTTTTGT	-100601242	True	NA	NA	False	AAAAAG	-19	NA	100602174	100573476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_100574242_100574986_100575129_100580262_100580353_100580800_100580946_100602120
transcript_50654.nnic	chr15	-	732	3	Fusion	ENSG00000259376.1_ENSG00000259755.1	novel	720	3	NA	NA	-14036	1562	multi-exon	FALSE	canonical	2	4	junction_2	10.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCGTTAAACCTGTTGG	-101063422	True	NA	-9	True	ATTAAA	-18	NA	101063492	101049169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_101049665_101050633_101050780_101063401
transcript_50656.nnic	chr15	-	748	3	Fusion	ENSG00000259376.1_ENSG00000259755.1	novel	720	3	NA	NA	7932	1562	multi-exon	FALSE	canonical	1	3	junction_2	11	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTCGTTAAACCTGTTGG	NA	False	NA	-9	True	ATTAAA	-18	NA	101078134	101049169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr15_-_101049665_101050633_101050780_101078027
transcript_50658.known	chr15	+	3469	13	FSM	ENSG00000184254.17	ENST00000329841.10	3469	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	11.3578166916005	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGCTTTTTCATTTAA	100878968	True	NA	7	True	AATAAA	-18	NA	100879830	100916626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892509_100892640_100892944_100893007_100893953_100894083_100895932_100896047_100898082_100898186_100900574_100900760_100905522_100905688_100907120_100907279_100908407_100908483_100914700
transcript_50659.nic	chr15	+	650	4	NIC	ENSG00000232386.9	novel	755	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTCCACGTCTATCTT	100849686	True	NA	NA	False	AATAAA	-21	NA	100849751	100856240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr15_+_100849911_100850210_100850333_100855230_100855349_100855989
transcript_50661.known	chr15	+	576	4	FSM	ENSG00000184254.17	ENST00000560555.1	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.8254179443567	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGCCCTTCAAAGAGGGTG	100878985	True	NA	NA	False	TTTAAA	-17	NA	100879847	100892239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100880007_100885266_100885372_100887571_100887713_100892068
transcript_50663.nic	chr15	+	527	2	ISM	ENSG00000232386.9	ENST00000558254.5	755	4	-31	5662	-22	-5662	5prime_fragment	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGCGTCTTCTTAGGT	100849686	True	NA	NA	False	AAGAAA	-10	NA	100849751	100850578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr15_+_100849911_100850210
transcript_50664.known	chr15	+	755	4	FSM	ENSG00000232386.9	ENST00000558254.5	755	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTTTCCACGTCTATCTT	100849717	True	NA	NA	False	AATAAA	-21	NA	100849782	100856240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_100849911_100850210_100850469_100855230_100855349_100855989
transcript_50667.known	chr15	-	4662	3	FSM	ENSG00000131873.7	ENST00000254190.4	4662	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_2	2	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATAAAGTTTTTCAAGTT	-101252035	False	NA	-29	True	AGTAAA	-15	NA	101252048	101175726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101178981_101235081_101235578_101251136
transcript_50669.known	chr15	-	1439	7	FSM	ENSG00000131871.15	ENST00000398226.7	1439	7	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	343.955786887404	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCAGGAGTGTCCA	-101266737	True	NA	NA	False	NA	NA	NA	101277450	101270816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101271646_101272763_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_50673.known	chr15	-	1218	6	FSM	ENSG00000131871.15	ENST00000526049.6	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_3	75.5232414558591	2639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTATTACTTATTTCTCT	-101266772	True	NA	-8	True	ATTAAA	-21	NA	101277485	101272190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101272857_101274419_101274496_101274591_101274682_101275254_101275362_101276540_101276676_101277341
transcript_50677.known	chr15	-	556	3	FSM	ENSG00000131871.15	ENST00000529968.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	963	junction_1	41	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATATCAAGAAGAATACACG	-101266787	True	NA	NA	False	NA	NA	NA	101277500	101275099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101275362_101276540_101276676_101277341
transcript_50678.known	chr15	-	355	2	FSM	ENSG00000131871.15	ENST00000534014.1	355	2	0	0	0	0	multi-exon	FALSE	canonical	3	1045	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ATTTAAAAAAAAAAAAAATA	-101266740	True	NA	NA	False	AGTAAA	-35	NA	101277453	101276432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101276676_101277341
transcript_5069.nnic	chr1	+	1214	7	NIC	ENSG00000159214.13	novel	1472	9	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	38.907654202683	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991034	True	NA	14	True	ATTAAA	-18	NA	43991777	43996528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992005_43992522_43992640_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50699.known	chr15	-	556	6	FSM	ENSG00000131876.18	ENST00000394082.8	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	1120.17380794232	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTGTGTTAGCAAAGT	-101276646	True	NA	NA	False	NA	NA	NA	101295203	101281653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101295096
transcript_50701.known	chr15	-	506	5	FSM	ENSG00000131876.18	ENST00000540017.6	506	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	1223.04180222918	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAATAATAGGCCCTCTTG	-101276698	True	NA	NA	False	NA	NA	NA	101295255	101281708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101295096
transcript_50704.known	chr15	-	1052	9	FSM	ENSG00000131876.18	ENST00000254193.11	1052	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	216.970620130929	17060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGTGTCATCATGGTGC	-101276691	True	NA	-2	True	AATAAA	-22	NA	101295248	101281509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286213_101286294_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_50705.known	chr15	-	924	8	FSM	ENSG00000131876.18	ENST00000559309.5	924	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	807.877617525055	1352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276647	True	NA	-6	True	AATAAA	-18	NA	101295204	101281513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101285802_101286907_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_50706.known	chr15	-	2108	7	FSM	ENSG00000131876.18	ENST00000558036.5	2108	7	0	0	0	0	multi-exon	FALSE	canonical	3	2243	junction_2	166.731737297439	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTGTGTCATCATG	-101276725	True	NA	-6	True	AATAAA	-18	NA	101295282	101281513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101281783_101284966_101285061_101285725_101287011_101287655_101287703_101291961_101292041_101293024_101293173_101295096
transcript_50709.known	chr15	-	1353	6	FSM	ENSG00000184277.13	ENST00000559107.5	1353	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	103.459364003458	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-101652374	False	NA	NA	False	NA	NA	NA	101652384	101632976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_50711.known	chr15	-	1395	6	FSM	ENSG00000184277.13	ENST00000333202.8	1395	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_5	91.358633965269	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGTGGGCCTGTTTTCTA	-101650917	True	NA	63	True	AATAAA	-17	NA	101652381	101641847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101651695_101651774_101652270
transcript_50715.known	chr15	-	1267	5	FSM	ENSG00000184277.13	ENST00000428002.6	1267	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	97.7113094784836	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATATGCTGTCATTTGA	-101650912	True	NA	NA	False	NA	NA	NA	101652376	101632976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101633729_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_50716.known	chr15	-	1329	5	FSM	ENSG00000184277.13	ENST00000347970.7	1329	5	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_4	24.3002057604457	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGGCCTGTTTTCTATA	-101652381	False	NA	65	True	AATAAA	-19	NA	101652391	101641845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101642645_101645086_101645163_101646724_101646900_101650003_101650162_101652270
transcript_50719.known	chr15	-	3481	19	FSM	ENSG00000185418.16	ENST00000335968.8	3481	19	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_6	9.92269502419629	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGTAGTAGTATAAGGTG	-101721887	True	NA	NA	False	AATATA	-9	NA	101724473	101653595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101654731_101656921_101657037_101657784_101657858_101661711_101661817_101671485_101671587_101671670_101671749_101675599_101675738_101684074_101684238_101685895_101686063_101701085_101701185_101702238_101702386_101703858_101703938_101705682_101705748_101708792_101708911_101711879_101712002_101714839_101714964_101721125_101721323_101723092_101723165_101724090
transcript_50720.nnic	chr15	-	607	4	NNC	ENSG00000259658.5	novel	503	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.69967317119759	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	101745752	101737098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr15_-_101737370_101743760_101743823_101744440_101744597_101745634
transcript_50722.known	chr15	-	503	3	FSM	ENSG00000259658.5	ENST00000558592.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	101745710	101737098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101737370_101744440_101744597_101745634
transcript_50723.known	chr15	-	517	3	FSM	ENSG00000259658.5	ENST00000635726.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTATTTACTACCTGGTTT	NA	False	NA	-5	True	ATTAAA	-26	NA	101746870	101737098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101737370_101744440_101744597_101746780
transcript_50726.known	chr15	+	1187	3	FSM	ENSG00000248893.3	ENST00000507796.3	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	101954884	101956412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_101955246_101955484_101955690_101955791
transcript_50727.known	chr15	-	712	3	FSM	ENSG00000259553.6	ENST00000561145.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.5	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTAAAGTCGCCCAGTG	-101961394	False	NA	NA	False	GATAAA	-6	NA	101961408	101959860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_-_101959983_101960294_101960399_101960922
transcript_50736.known	chr15	+	427	3	FSM	ENSG00000185596.16	ENST00000559884.5	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	106	146	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTAACTCACACTTCAT	101953192	True	NA	NA	False	TATAAA	-24	NA	101961602	101966755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr15_+_101961642_101966069_101966224_101966521
transcript_50738.nnic	chr16	+	1249	2	NNC	ENSG00000231439.4	novel	1054	2	NA	NA	-62	8	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTCTTTTTTTTCCTTTA	NA	False	NA	NA	False	CATAAA	-19	NA	22847	25131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23086_24120
transcript_50739.known	chr16	+	1054	2	FSM	ENSG00000231439.4	ENST00000527434.1	1054	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTCACTACTCTTTTTT	NA	False	NA	NA	False	CATAAA	-11	NA	22909	25123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23086_24245
transcript_5074.known	chr1	+	860	6	FSM	ENSG00000159214.13	ENST00000486504.5	860	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8416867112827	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAAGGCTGTTGGTCTGTCT	43991040	True	NA	NA	False	NA	NA	NA	43991783	43996279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43992020_43993886_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50750.known	chr16	+	1085	5	FSM	ENSG00000161981.11	ENST00000383018.7	1085	5	0	0	0	0	multi-exon	FALSE	canonical	3	906	junction_1	31.8040877875785	4901	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGGAGCTCACAGTGGC	43428	True	NA	13	True	AATAAA	-24	NA	53828	57668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_54059_55458_55550_55776_55883_56538_56614_57085
transcript_50751.known	chr16	+	831	6	FSM	ENSG00000161981.11	ENST00000397876.6	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	450.564534778316	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCAAATGCCCTAGTCACA	43486	True	NA	-58	True	NA	NA	NA	53886	57372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_54059_55458_55550_55776_55883_56320_56421_56538_56614_57085
transcript_50753.nnic	chr16	+	802	2	Genic_Genomic	ENSG00000278995.1	novel	279	1	NA	NA	-1937	29	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTTGGTGGTCTCTTC	72726	False	NA	NA	False	AATAAA	-22	NA	72745	74990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr16_+_72937_74379
transcript_50757.known	chr16	-	2784	12	FSM	ENSG00000103148.17	ENST00000399953.7	2784	12	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_9	32.4513622070154	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTCTGGGCAGGCCCTT	-137678	False	NA	-44	True	AATAAA	-32	NA	138512	85800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86871_88697_88891_89712_89903_92595_92726_93218_93326_98144_98302_100371_100510_110524_110607_112621_112776_119125_119256_130521_130592_138149
transcript_50761.known	chr16	+	1193	5	FSM	ENSG00000103152.12	ENST00000219431.4	1193	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	265.263548193113	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTGTGCCTTAGCCAGA	68954	True	NA	24	True	AATAAA	-15	NA	78256	85842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78334_79138_79332_79424_79701_83051_83257_85400
transcript_50762.known	chr16	+	1036	4	FSM	ENSG00000103152.12	ENST00000356432.8	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	516	junction_1	28.7556757682529	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGCCTTAGCCAGAGCTC	68922	True	NA	28	True	AATAAA	-19	NA	78224	85846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78334_79424_79701_83051_83257_85400
transcript_50763.known	chr16	+	576	3	FSM	ENSG00000188536.13	ENST00000251595.11	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	172875	173710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_173008_173124_173330_173471
transcript_50764.known	chr16	+	513	3	FSM	ENSG00000188536.13	ENST00000397806.1	513	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTGTGCCTGGGTTC	NA	False	NA	NA	False	AATAAA	-17	NA	172889	173710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_172959_173124_173330_173471
transcript_50765.known	chr16	+	577	3	FSM	ENSG00000206172.8	ENST00000320868.9	577	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	176664	False	NA	NA	False	AATAAA	-17	NA	176679	177522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_176812_176928_177134_177282
transcript_50766.known	chr16	+	504	3	FSM	ENSG00000206172.8	ENST00000397797.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGTGTGCCTGAGTTT	176688	False	NA	NA	False	AATAAA	-17	NA	176703	177522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_176763_176928_177134_177282
transcript_50767.known	chr16	+	528	3	FSM	ENSG00000086506.3	ENST00000199708.3	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	8	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTTGCCGTGCTCTCT	179972	True	NA	10	True	AGTAAA	-17	NA	180458	181179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_180582_180665_180871_180979
transcript_50769.known	chr16	-	547	1	FSM	ENSG00000268836.1	ENST00000595428.1	547	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTTGTTTTTTGCTTTTT	-186258	False	NA	-1	True	CATAAA	-18	NA	186294	185747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_185700_186300
transcript_50780.known	chr16	-	989	11	FSM	ENSG00000007392.17	ENST00000418978.5	989	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	245.015183203001	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCGGCGTCGGAGGCGGTCA	-229339	False	NA	NA	False	NA	NA	NA	229374	190121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_208600_208665_220648_220748_227241_227337_228332_228403_229278
transcript_5079.nnic	chr1	+	1465	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	9	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	36.7238342224774	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991049	True	NA	14	True	ATTAAA	-18	NA	43991792	43996528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992388_43993889_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50790.known	chr16	-	1520	11	FSM	ENSG00000007392.17	ENST00000629543.2	1520	11	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	196.873157134232	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTCCTCTGCGTAGAG	-219466	True	NA	-16	True	AATAAA	-38	NA	229450	188974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_50797.known	chr16	-	1211	10	FSM	ENSG00000007392.17	ENST00000419516.5	1211	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	207.450127875486	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCGTGTCTGGTGGGGATG	-219450	True	NA	NA	False	NA	NA	NA	229434	189895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_228332_228403_229278
transcript_5081.known	chr1	+	697	6	FSM	ENSG00000159214.13	ENST00000466180.1	697	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.0526957177424	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGCTTCCACACCCATG	43991098	False	NA	NA	False	NA	NA	NA	43991841	43996110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_43992005_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995941
transcript_50810.known	chr16	-	1434	10	FSM	ENSG00000007392.17	ENST00000293872.13	1434	10	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_9	66.7096157949225	1077	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGCGGGGGGTTTCTGCT	-219465	True	NA	-31	True	AATAAA	-23	NA	229449	188989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189967_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_50811.known	chr16	-	1504	10	FSM	ENSG00000007392.17	ENST00000397783.5	1504	10	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	150.898870558406	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTCTGCGTAGAGGCTT	-219479	True	NA	-12	True	AATAAA	-42	NA	229463	188970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189930_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_50812.known	chr16	-	2097	9	FSM	ENSG00000007392.17	ENST00000337351.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_8	66.317418526357	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGCGTAGAGGCTTTT	-219479	True	NA	-10	True	AATAAA	-44	NA	229463	188968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_190136_190540_190571_192926_193016_199061_199239_206003_206148_208077_208189_220648_220748_227241_227337_229278
transcript_50813.known	chr16	-	423	3	FSM	ENSG00000007392.17	ENST00000442701.1	423	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	291.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTGTAGTTTAAAATTT	-190488	False	NA	34	True	AATACA	-6	NA	190549	189114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_189340_189946_190136_190540
transcript_50819.known	chr16	+	2901	13	FSM	ENSG00000167930.17	ENST00000301678.7	2901	13	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_2	236.155360232764	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTGTGTGCGTCTGCCTGT	226485	True	NA	38	True	NA	NA	NA	234845	266120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_234858_249548_249655_254387_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_50820.nic	chr16	+	2913	13	NIC	ENSG00000167930.17	novel	2909	13	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_4	227.08813450582	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGTGGTCAGGCGTGAG	234704	False	NA	14	True	AATAAA	-23	NA	234789	266096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259995_260161_261383_261515_262092_262226_262423_262554_263261_263403_263699_263776_264015_264172_264613_264717_264810
transcript_50824.nic	chr16	+	1370	8	ISM	ENSG00000167930.17	ENST00000399932.8	2909	13	-31	3351	-12	501	5prime_fragment	FALSE	canonical	3	536	junction_1	119.041923673287	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCCCGACGCTGTGCCTG	234704	False	NA	NA	False	AATAAA	-21	NA	234789	262745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_261383_261515_262092_262226_262423
transcript_50825.nic	chr16	+	1160	6	NIC	ENSG00000167930.17	novel	984	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_5	307.022214180017	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAATCAAGGAATCT	234704	False	NA	7	True	AATAAA	-17	NA	234789	260788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968_260161_260412
transcript_50829.known	chr16	+	964	6	FSM	ENSG00000242173.10	ENST00000219409.8	964	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	1.72046505340853	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGGTGTCGTCTCTTT	280559	True	NA	14	True	ATTAAA	-22	NA	280590	283010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_280754_281745_281926_282024_282109_282296_282374_282466_282531_282614
transcript_50831.nic	chr16	+	1412	5	ISM	ENSG00000167930.17	ENST00000399932.8	2909	13	-31	5308	-12	0	5prime_fragment	FALSE	canonical	3	536	junction_1	130.958963038045	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAAGAATCAAGGAATCT	234704	False	NA	7	True	AATAAA	-17	NA	234789	260788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_234858_249548_249655_254380_254682_259482_259600_259968
transcript_50832.known	chr16	+	583	5	FSM	ENSG00000167930.17	ENST00000419173.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	328.335575288454	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGATCCAAGATGTTCTT	226457	True	NA	NA	False	TATAAA	-6	NA	234817	259521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_234858_249548_249655_253832_253930_254380_254682_259482
transcript_5084.nnic	chr1	+	1158	6	NIC	ENSG00000159214.13	novel	1659	8	NA	NA	-36	0	intron_retention	FALSE	canonical	3	10	junction_1	35.9466271018576	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTAGTGGTGCACAATGGG	43991688	True	NA	14	True	ATTAAA	-18	NA	43992185	43996528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_43992388_43993803_43993965_43995107_43995163_43995600_43995671_43995777_43995857_43995937
transcript_50840.known	chr16	-	800	6	FSM	ENSG00000086504.18	ENST00000441883.5	800	6	0	0	0	0	multi-exon	FALSE	canonical	1	90	junction_5	685.248684785312	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTGTCAGAGCCGGCGG	-359475	True	NA	NA	False	NA	NA	NA	370432	367723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370361
transcript_50845.known	chr16	-	1512	5	FSM	ENSG00000086504.18	ENST00000483764.5	1512	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_4	498.456868745933	1509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGCTTTGAGGACTGGT	-359552	True	NA	-10	True	AGTAAA	-26	NA	370509	367383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930_370226_370498
transcript_50846.known	chr16	-	865	6	FSM	ENSG00000086504.18	ENST00000389675.6	865	6	0	0	0	0	multi-exon	FALSE	canonical	1	100	junction_5	682.346656766192	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGACACAGATCCCGGGGAG	-359552	True	NA	NA	False	NA	NA	NA	370509	367612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_368636_369067_369221_369930_370226_370484
transcript_50847.known	chr16	-	722	5	FSM	ENSG00000086504.18	ENST00000447696.5	722	5	0	0	0	0	multi-exon	FALSE	canonical	1	248	junction_4	631.199799984125	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGGTGAGTGTGTGAG	-359545	True	NA	NA	False	NA	NA	NA	370502	368334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_368415_368500_368636_369067_369221_369930_370226_370443
transcript_50848.known	chr16	-	3672	13	FSM	ENSG00000129925.11	ENST00000431232.7	3672	13	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_10	65.001869631231	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGTTTTTACATTTTTTCT	-376164	True	NA	-16	True	ACTAAA	-1	NA	381978	370787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377849_381700
transcript_50849.known	chr16	-	2346	13	FSM	ENSG00000129925.11	ENST00000250930.7	2346	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	210.116964781259	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACTTCCTCCTACTGAG	-376164	True	NA	-5	True	AATAAA	-16	NA	381978	371863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_372284_372610_372728_374004_374152_374220_374400_374755_374893_375132_375257_375344_375436_376135_376456_376543_376813_377036_377165_377377_377586_377670_377806_381907
transcript_50850.known	chr16	-	1467	4	FSM	ENSG00000086504.18	ENST00000469744.1	1467	4	0	0	0	0	multi-exon	FALSE	canonical	3	1485	junction_3	106.302503367617	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCCGGGAGCGAGTAAAGT	-370211	False	NA	-53	True	NA	NA	NA	370234	367426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_367783_368327_368415_368500_369221_369930
transcript_50858.known	chr16	+	1012	9	FSM	ENSG00000242612.7	ENST00000424398.6	1012	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.0154724577217	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCTGAACACTCAGCTATT	401860	False	NA	NA	False	NA	NA	NA	401881	411976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_402044_404955_405025_406345_406362_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_50864.known	chr16	+	1551	9	FSM	ENSG00000242612.7	ENST00000219481.10	1551	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_3	26.2651741856017	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATCGTTTAGGGGTTGT	401863	False	NA	4	True	ATTAAA	-16	NA	401884	412482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_402044_404955_405025_406345_406398_407424_407561_410242_410368_410690_410785_410971_411077_411360_411579_411889
transcript_50891.known	chr16	+	1167	6	FSM	ENSG00000103202.13	ENST00000448828.5	1167	6	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	1308.57867933113	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGAAGTTTTGCACACCCA	370282	True	NA	-6	True	AGTAAA	-1	NA	397198	400734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398207_398395_398989_399124_399378_399481_399626_399740_400218
transcript_50898.known	chr16	+	1232	5	FSM	ENSG00000103202.13	ENST00000397722.5	1232	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1196.79008184393	2243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACCCAGTTCCATAACGT	396418	True	NA	6	True	AGTAAA	-13	NA	396724	400746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397080_398989_399124_399378_399481_399626_399740_400218
transcript_50904.known	chr16	+	966	5	FSM	ENSG00000103202.13	ENST00000433358.5	966	5	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_4	1135.95254632401	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGGTGGTACACTAATTA	370320	True	NA	21	True	ATTAAA	-18	NA	397236	400648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400108
transcript_50906.known	chr16	+	1000	5	FSM	ENSG00000103202.13	ENST00000219479.7	1000	5	0	0	0	0	multi-exon	FALSE	canonical	3	2194	junction_1	296.894762500116	2825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCATAACGTTGTTGGAT	370282	True	NA	14	True	AGTAAA	-21	NA	397198	400754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398989_399124_399378_399481_399626_399740_400218
transcript_50908.known	chr16	+	1652	5	FSM	ENSG00000103202.13	ENST00000460297.1	1652	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	1151.34888283265	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTGTGCCCAGCACATGG	370291	True	NA	6	True	ATTAAA	-3	NA	397207	400633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398207_399124_399378_399481_399626_399740_400218
transcript_50911.known	chr16	+	904	4	FSM	ENSG00000103202.13	ENST00000621774.4	904	4	0	0	0	0	multi-exon	TRUE	canonical	2	115	junction_2	1075.57560816936	2151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCATAACGTTGTTGGA	370275	True	NA	13	True	AGTAAA	-20	NA	397191	400753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_397314_398989_399124_399626_399740_400218
transcript_50913.known	chr16	+	4801	14	FSM	ENSG00000090565.17	ENST00000262305.9	4801	14	0	0	0	0	multi-exon	TRUE	canonical	1	37	junction_3	28.1588898382567	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTGGTGCGCACCTATA	NA	False	NA	4	True	AATAAA	-13	NA	425648	523011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_426721_461403_461498_471294_471390_482524_482737_488850_489001_496823_496860_503003_503098_505523_505628_510659_510801_518942_519025_519753_519892_520121_520278_520458_520600_520725
transcript_50915.nic	chr16	+	858	7	NIC	ENSG00000090565.17	novel	3550	15	NA	NA	-13425	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_6	40.8112185012351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTTGTGTCTTTAT	NA	False	NA	6	True	NA	NA	NA	461424	497448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_461498_471294_471390_482524_482737_488850_489001_491133_491269_496823_496860_497291
transcript_50916.nic	chr16	+	723	6	NIC	ENSG00000090565.17	novel	4801	14	NA	NA	-13425	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_5	42.0647120517899	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCCTTTGTGTCTTTAT	NA	False	NA	6	True	NA	NA	NA	461424	497448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_461498_471294_471390_482524_482737_488850_489001_496823_496860_497291
transcript_50918.known	chr16	+	1289	4	FSM	ENSG00000282907.1	ENST00000635107.1	1289	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	62.4179461373089	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGACTGGGGTGGAGCCC	569444	False	NA	NA	False	NA	NA	NA	569460	576257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_569796_574065_574764_575838_575971_576133
transcript_50919.known	chr16	+	2052	4	FSM	ENSG00000007541.17	ENST00000422307.6	2052	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	5.65685424949238	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAAGCTCTTATCCTTTA	567741	True	NA	25	True	TATAAA	-33	NA	569975	577234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_570097_574065_574764_575838_575971_576133
transcript_50920.known	chr16	+	2071	2	FSM	ENSG00000257108.2	ENST00000540585.1	2071	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	566973	True	NA	4	True	AATAAA	-16	NA	567004	569495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_567076_567495
transcript_50921.known	chr16	+	2096	2	FSM	ENSG00000257108.2	ENST00000424439.3	2096	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGGCTGGGGTCTTGT	566973	True	NA	4	True	AATAAA	-16	NA	567004	569495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_567076_567470
transcript_50922.known	chr16	+	1976	2	FSM	ENSG00000127578.7	ENST00000319070.3	1976	2	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGGCTTGCTGCTGCT	629792	True	NA	8	True	AATAAA	-21	NA	630984	634117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_631425_632581
transcript_50927.known	chr16	-	797	6	FSM	ENSG00000130731.16	ENST00000301686.13	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	329.291117402216	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616793	True	NA	-18	True	AATAAA	-18	NA	636305	634429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_635611_635775_636093
transcript_50935.known	chr16	-	755	6	FSM	ENSG00000130731.16	ENST00000456420.6	755	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	414.677899097601	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGACAGCCCCACCCAGTC	-616727	True	NA	-101	True	NA	NA	NA	636239	634512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_635611_635775_636093
transcript_50940.known	chr16	-	588	5	FSM	ENSG00000130731.16	ENST00000568077.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	419	junction_4	358.249563851793	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCAGTCTGTGCTCTCAG	-616819	True	NA	-90	True	NA	NA	NA	636331	634501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635280_635341_636093
transcript_50941.known	chr16	-	801	5	FSM	ENSG00000130731.16	ENST00000614890.4	801	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	476.879112039938	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTGTCTGCCCCACCTC	-616854	True	NA	-15	True	AATAAA	-21	NA	636366	634426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_634957_635611_635775_636093
transcript_50945.known	chr16	-	518	5	FSM	ENSG00000130731.16	ENST00000564039.1	518	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_3	464.767683902399	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAATGCCTGATCTTCCGG	-616766	True	NA	NA	False	NA	NA	NA	636278	634625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_634888_635064_635280_635341_636093
transcript_50950.known	chr16	-	726	5	FSM	ENSG00000130731.16	ENST00000397666.6	726	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	447.374214165278	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGGTGTCTGCCCCAC	-616790	True	NA	-18	True	AATAAA	-18	NA	636302	634429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_635280_635341_635611_635775_636093
transcript_50954.known	chr16	-	604	4	FSM	ENSG00000130731.16	ENST00000397664.8	604	4	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_2	520.944228194237	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCCGGCTTGCTGGTGTC	-616839	True	NA	-26	True	AATAAA	-10	NA	636351	634437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_635280_635341_636093
transcript_50955.known	chr16	-	558	4	FSM	ENSG00000130731.16	ENST00000397665.6	558	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	550.675544722621	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGGACCTTGTGGACGACA	-616778	True	NA	-114	True	NA	NA	NA	636290	634525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_635611_635775_636093
transcript_50957.known	chr16	-	544	3	FSM	ENSG00000130731.16	ENST00000338401.8	544	3	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_2	614.5	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTCTGCCCCACC	-616830	True	NA	-17	True	AATAAA	-19	NA	636342	634428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_634645_634718_634798_636093
transcript_50960.nnic	chr16	+	849	5	NIC	ENSG00000172366.20	novel	1050	6	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	5	junction_1	214.162759367729	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635800	True	NA	22	True	AATAAA	-15	NA	641916	648474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_642044_646471_646609_647416_647545_647782_647885_648119
transcript_50961.known	chr16	+	1050	6	FSM	ENSG00000172366.20	ENST00000491999.5	1050	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	175.418813130177	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635729	True	NA	22	True	AATAAA	-15	NA	641845	648474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_642044_642119_642250_646471_646609_647416_647545_647782_647885_648119
transcript_50963.known	chr16	+	1379	5	FSM	ENSG00000172366.20	ENST00000615744.4	1379	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	213.512733812295	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGGAGCTCCAGGCTAAT	642362	False	NA	-15	True	GGGGCT	-5	NA	642450	648437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_643145_646471_646609_647416_647545_647782_647885_648119
transcript_50964.known	chr16	+	628	4	FSM	ENSG00000172366.20	ENST00000611328.4	628	4	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	228.196309250513	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	636801	False	NA	22	True	AATAAA	-15	NA	636902	648474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_636946_647416_647545_647782_647885_648119
transcript_50967.nnic	chr16	+	715	4	NIC	ENSG00000172366.20	novel	931	5	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_1	213.585267906442	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	635797	True	NA	22	True	AATAAA	-15	NA	641913	648474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_642044_647416_647545_647782_647885_648119
transcript_50971.nnic	chr16	+	1300	4	NIC	ENSG00000172366.20	novel	1379	5	NA	NA	-21	0	combination_of_known_splicesites	FALSE	canonical	1	9	junction_1	227.724980330808	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGAGTGTCTTTGACT	642416	False	NA	22	True	AATAAA	-15	NA	642429	648474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_643145_647416_647545_647782_647885_648119
transcript_50977.known	chr16	+	2257	12	FSM	ENSG00000161996.19	ENST00000549024.5	2257	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	25.2422969184464	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTATTGCTGCATTGTTGCA	661022	True	NA	31	True	AATAAA	-17	NA	661064	667829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_661502_661596_661788_661890_662060_662219_662332_662672_662845_665678_665802_665949_666125_666219_666351_666454_666599_666672_666793_666904_666990_667431
transcript_50980.known	chr16	+	2490	19	FSM	ENSG00000140983.14	ENST00000315082.9	2490	19	0	0	0	0	multi-exon	FALSE	canonical	3	637	junction_10	175.760569462487	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTGTTGTTTGTCTTTA	643613	True	NA	65	True	NA	NA	NA	668131	674171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_50993.nic	chr16	+	2577	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-24	0	intron_retention	TRUE	canonical	3	897	junction_9	113.357260517846	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643562	True	NA	19	True	ATTAAA	-19	NA	668080	674125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_50998.nic	chr16	+	2396	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-24	0	intron_retention	FALSE	canonical	3	40	junction_8	322.165080510514	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643562	True	NA	19	True	ATTAAA	-19	NA	668080	674125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_669552_669607_670122_670176_670248_670358_670455_670558_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_50999.nic	chr16	+	2441	18	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-24	0	intron_retention	FALSE	canonical	3	182	junction_4	300.988383364566	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643562	True	NA	19	True	ATTAAA	-19	NA	668080	674125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_51.known	ERCC-00099	+	1344	1	FSM	ERCC-00099A	DQ875387	1344	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00099_+_0_1300
transcript_51002.known	chr16	+	2559	18	FSM	ENSG00000140983.14	ENST00000569675.5	2559	18	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_5	294.246383590445	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTGTTTGTCTTTATGT	643616	True	NA	68	True	NA	NA	NA	668134	674174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_668237_668352_668412_668487_668700_669552_669607_670122_670176_670265_670358_670455_670558_670674_670774_670891_671001_671082_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_51015.nic	chr16	+	2523	17	NIC	ENSG00000140983.14	novel	2490	19	NA	NA	-24	0	intron_retention	FALSE	canonical	3	182	junction_4	280.627867468646	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCGGATCCCAGTCTCTG	643562	True	NA	19	True	ATTAAA	-19	NA	668080	674125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_668237_668352_668412_668487_668570_668655_668700_670122_670176_670248_670358_670455_670558_670674_670774_670891_671204_671696_671782_671859_672003_672083_672182_672253_672385_672488_672567_672702_672826_672927_673131_673479
transcript_5103.known	chr1	+	482	2	FSM	ENSG00000230615.8	ENST00000623351.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGTAATCCCAGCTACTC	44030203	True	NA	NA	False	AATACA	-26	NA	44030442	44040273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44030558_44039906
transcript_5104.nnic	chr1	+	639	2	FSM	ENSG00000230615.8	ENST00000693417.1	678	2	18	21	1	-21	multi-exon	FALSE	canonical	3	16	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGCATCTTTTGATCTAT	44030192	True	NA	2	True	AATAAA	-15	NA	44030431	44040427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44030550_44039906
transcript_5105.nic	chr1	+	1686	12	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.023551407888	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	NA	False	NA	17	True	AATAGA	-15	NA	44213423	44220673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44213528_44213708_44213859_44214349_44214442_44214538_44214617_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_51111.known	chr16	+	1458	8	FSM	ENSG00000103269.14	ENST00000352681.8	1458	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	4.70345075232981	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGGCTGTCCCGGGCT	675631	False	NA	9	True	AATAAA	-15	NA	675670	678268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_675830_676335_676498_676671_676897_676970_677120_677275_677389_677458_677560_677638_677700_677780
transcript_51115.known	chr16	-	730	4	FSM	ENSG00000260394.2	ENST00000567091.1	730	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGGCCTGACCACACACCT	-672675	False	NA	NA	False	AATAAA	-30	NA	679777	678503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_678808_678935_679030_679208_679367_679603
transcript_51116.known	chr16	-	2205	8	FSM	ENSG00000161999.13	ENST00000567120.5	2205	8	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_1	35.3218438513793	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTGTGTCGGGAGTCGGT	-684517	False	NA	-13	True	AGTAAA	-13	NA	684528	681670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684065
transcript_51117.known	chr16	-	1015	8	FSM	ENSG00000161999.13	ENST00000562824.5	1015	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	182.609989220922	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCTGGACCAGGACGC	-684352	False	NA	NA	False	CATAAA	-33	NA	684363	682527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_682875_682952_683088_683166_683235_683321_683442_683529_683599_683684_683782_683860_683910_684233
transcript_51118.known	chr16	+	1340	7	FSM	ENSG00000103266.11	ENST00000219548.9	1340	7	0	0	0	0	multi-exon	FALSE	canonical	3	1110	junction_4	63.7636695584214	109	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTGGAGATGAAGACG	674773	True	NA	15	True	NA	NA	NA	680409	682801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_680685_681151_681351_681437_681604_681792_681881_682019_682077_682164_682282_682363
transcript_51124.known	chr16	-	3243	9	FSM	ENSG00000127580.17	ENST00000293883.9	3243	9	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_6	17.8448171747429	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGGCACTGCGTGTCACC	-688948	True	NA	-8	True	AATAAA	-15	NA	690398	684621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_684903_684991_685177_685256_685598_685678_685784_685868_685991_686067_686187_686743_687417_687561_687740_689159
transcript_51127.known	chr16	-	173	3	FSM	ENSG00000127585.12	ENST00000562585.1	173	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	31	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCGCCTCCTGTCTCTG	-695252	False	NA	NA	False	NA	NA	NA	695263	694657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_694698_694991_695077_695215
transcript_51128.known	chr16	+	3322	4	FSM	ENSG00000103260.9	ENST00000568223.7	3322	4	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	25.8241919309954	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTGGCATGCATCTGTA	713476	True	NA	NA	False	AATAAA	-20	NA	715117	719655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_715394_715583_715985_716932_716993_717070
transcript_5113.known	chr1	+	1552	11	FSM	ENSG00000178028.14	ENST00000315913.9	1552	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.697468928337	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208790	True	NA	25	True	AATAGA	-23	NA	44213487	44220681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44213528_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_51136.known	chr16	-	2095	11	FSM	ENSG00000103245.14	ENST00000251588.7	2095	11	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	20.8844439715306	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCCTACGAAAACAGCTCCT	-739275	True	NA	-13	True	AATAAA	-19	NA	740997	729764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_730656_730842_731001_731564_731703_732300_732374_733297_733428_734228_734348_734736_734872_736265_736399_737185_737330_739642_739739_740919
transcript_51148.known	chr16	+	1512	8	FSM	ENSG00000103253.19	ENST00000389703.8	1512	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	98.4054503219269	832	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCAGTGTTGGCAGATG	726874	True	NA	9	True	AATAAA	-14	NA	727105	729715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_727615_727964_728030_728115_728234_728315_728425_728503_728605_728793_728896_729008_729089_729287
transcript_51157.known	chr16	+	454	3	FSM	ENSG00000103254.10	ENST00000568916.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	106.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	721640	False	NA	17	True	GATAAA	-17	NA	721671	722590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_721703_721800_721942_722308
transcript_51158.known	chr16	+	1686	3	FSM	ENSG00000103254.10	ENST00000566525.5	1686	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	104.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCCTGACTCATGTTTTATG	720539	True	NA	16	True	GATAAA	-16	NA	720580	722589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_721703_721800_722084_722308
transcript_51167.known	chr16	+	475	2	FSM	ENSG00000103254.10	ENST00000570237.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTCATGTTTTATGG	721910	False	NA	17	True	GATAAA	-17	NA	721941	722590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_722135_722308
transcript_51168.known	chr16	-	499	2	FSM	ENSG00000103245.14	ENST00000567172.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTGTTTGTTTGTTTG	-739275	True	NA	-4	True	NA	NA	NA	740997	739317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_739739_740919
transcript_51169.known	chr16	+	3092	22	FSM	ENSG00000127586.17	ENST00000262315.14	3092	22	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_8	111.130941541051	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGTGCGAGTGGAGTGGG	776820	True	NA	23	True	TATAAA	-23	NA	788619	798074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790176_790270_790346_790400_790524_790667_791160_791371_791850_791949_792223_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_51173.known	chr16	+	4494	19	FSM	ENSG00000127586.17	ENST00000471202.5	4494	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	138.159328313364	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCACGTGCGAGTGGAGTG	776835	True	NA	21	True	TATAAA	-21	NA	788634	798072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_788776_788930_789126_789209_789361_789546_789716_790006_790270_790346_790400_790524_792348_792438_792591_792717_792812_792965_793065_793143_793275_794053_794202_795131_795357_795684_795835_795946_796078_796716_796862_796960_797093_797693_797752_797838
transcript_51176.known	chr16	-	940	6	FSM	ENSG00000007376.8	ENST00000565377.1	940	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	84.5680790842502	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCGGAGTGGACGCTGGA	-785323	True	NA	NA	False	NA	NA	NA	788381	785982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555_787646_788255
transcript_51177.known	chr16	-	2048	6	FSM	ENSG00000007376.8	ENST00000007264.7	2048	6	0	0	0	0	multi-exon	TRUE	canonical	3	189	junction_5	27.6188341535265	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCGTGAACGTGTCCGAA	-785323	True	NA	-8	True	AATAAA	-24	NA	788381	784973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_787555_787745_788255
transcript_5118.nic	chr1	+	1627	11	NIC	ENSG00000178028.14	novel	1552	11	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	120.960696095881	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208753	True	NA	17	True	AATAGA	-15	NA	44213450	44220673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44213528_44213662_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_51180.known	chr16	-	1835	5	FSM	ENSG00000007376.8	ENST00000567114.5	1835	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_4	88.5476566601285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGGACTCCAAATAAATGT	-785339	True	NA	-48	True	NA	NA	NA	788397	785013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_786378_786826_786929_787076_787180_787353_787478_788255
transcript_51182.known	chr16	-	985	3	FSM	ENSG00000127588.5	ENST00000248150.5	985	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCAGCTTCCTGTCTCTG	-800631	False	103	NA	False	TATAAA	-5	NA	800734	798040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_798825_798979_799112_800665
transcript_51185.known	chr16	-	2606	11	FSM	ENSG00000103227.19	ENST00000262301.16	2606	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	16.1418710191849	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACTGTTTAAATGAAGAA	-970480	True	NA	-3	True	NA	NA	NA	970984	853633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_934243_934255_954356_954667_970787
transcript_51187.known	chr16	-	1603	10	FSM	ENSG00000103227.19	ENST00000568897.5	1603	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	16.3095064303001	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAAGACCCAGCCCCTCGGC	-970362	True	NA	-28	True	AATAAA	-3	NA	970866	854511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_854707_868943_869057_869882_870067_870728_870883_871160_871342_879569_879738_893006_893073_910930_911080_954352_954667_970787
transcript_5119.known	chr1	+	1545	11	FSM	ENSG00000178028.14	ENST00000361745.10	1545	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	117.432363511938	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTTTTCCTTTCCTTCA	44208757	True	NA	25	True	AATAGA	-23	NA	44213454	44220681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44213528_44213748_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_51192.known	chr16	-	1728	4	FSM	ENSG00000260807.7	ENST00000563863.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	11.4309521329882	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTGCTGTCTCCCAAGT	-980930	False	NA	-3	True	AATGAA	-19	NA	981298	975763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_977094_979024_979111_979600_979759_981144
transcript_51193.known	chr16	-	813	3	FSM	ENSG00000260807.7	ENST00000565069.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCAAGGACCTCCCAGAGAG	-980930	False	NA	NA	False	NA	NA	NA	981298	976520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_977094_979024_979111_981144
transcript_51194.nic	chr16	-	894	2	ISM	ENSG00000196364.9	ENST00000568091.2	1864	4	1917	0	1069	0	3prime_fragment	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGCTCCGGGCTCTGTGTGG	NA	False	NA	NA	False	AATAAA	-17	NA	1261928	1260951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_1261463_1261545
transcript_5120.nnic	chr1	+	1588	11	NNC	ENSG00000178028.14	novel	1552	11	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.528308854889	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208768	True	NA	17	True	AATAGA	-15	NA	44213465	44220673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_44213550_44213708_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_51200.known	chr16	+	3109	8	FSM	ENSG00000103275.21	ENST00000397515.6	3109	8	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_1	889.361890024849	4361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1272406	True	NA	15	True	ATTAAA	-15	NA	1309634	1327018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1312346_1312604_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_51201.known	chr16	+	3151	8	FSM	ENSG00000103275.21	ENST00000567383.6	3151	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	909.139445086531	4187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	1272427	True	NA	14	True	ATTAAA	-14	NA	1309655	1327017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1312346_1312668_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_51205.known	chr16	+	3253	7	FSM	ENSG00000103275.21	ENST00000355803.8	3253	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	765.464437812467	4369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1308868	False	NA	15	True	ATTAAA	-15	NA	1308879	1327018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309420_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_51206.known	chr16	+	2832	7	FSM	ENSG00000103275.21	ENST00000325437.9	2832	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	749.829313910839	4530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGGCCTGCCGGGTGTGTC	1306613	True	NA	15	True	ATTAAA	-15	NA	1309152	1327018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309272_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_51212.known	chr16	+	1098	7	FSM	ENSG00000103275.21	ENST00000566587.5	1098	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	768.738938493137	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGAATTGCCCGTTTC	1272574	False	NA	-23	True	NA	NA	NA	1309802	1324952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1310254_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_51216.known	chr16	+	2850	7	FSM	ENSG00000103275.21	ENST00000397514.8	2850	7	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	219.269240888913	8829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGCCTGCCGGGTGTGT	1272407	True	NA	14	True	ATTAAA	-14	NA	1309635	1327017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653_1315727_1320173_1320284_1320437_1320518_1324729
transcript_51217.known	chr16	+	1771	4	FSM	ENSG00000103275.21	ENST00000473256.6	1771	4	0	0	0	0	multi-exon	FALSE	canonical	3	1635	junction_1	122.532535361928	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAAAAGA	1272407	True	NA	NA	False	NA	NA	NA	1309635	1317125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1309774_1314019_1314097_1314292_1314377_1315653
transcript_51218.known	chr16	+	1237	11	FSM	ENSG00000090581.11	ENST00000683887.1	1237	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	108.492211702039	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTGGGTTAAGAAAATT	1347994	True	NA	4	True	AGTAAA	-16	NA	1351954	1363351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361694_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_51221.known	chr16	+	1975	11	FSM	ENSG00000090581.11	ENST00000204679.9	1975	11	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_5	11.7966096824469	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGACAGTAGCACAAAATATA	1347970	True	NA	NA	False	AATAAA	-20	NA	1351930	1364113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_51227.known	chr16	+	2185	10	FSM	ENSG00000090581.11	ENST00000683366.1	2185	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	104.269711994933	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1347979	True	NA	NA	False	GATAAA	-31	NA	1351939	1364387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238_1352307_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_51231.known	chr16	+	2313	10	FSM	ENSG00000090581.11	ENST00000527168.6	2313	10	0	0	0	0	multi-exon	FALSE	canonical	3	339	junction_4	12.2030152112875	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGCTATTAAAAGTCTTTG	1347985	True	NA	NA	False	GATAAA	-31	NA	1351945	1364387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_51232.nnic	chr16	+	1139	10	NIC	ENSG00000090581.11	novel	1975	11	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	114.113978109608	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCTGGGTTAAGAAAATT	1347986	True	NA	4	True	AGTAAA	-16	NA	1351946	1363351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_1352018_1352238_1352307_1361742_1361798_1361871_1361956_1362037_1362132_1362205_1362321_1362451_1362535_1362610_1362743_1362824_1362907_1362996
transcript_51241.known	chr16	-	1431	6	FSM	ENSG00000059145.19	ENST00000301712.5	1431	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	8.01498596380555	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAAGAGTAGAGGATTTTGT	-1412548	False	2203	NA	False	AATAAA	-17	NA	1414751	1398304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1398942_1399373_1399510_1401567_1401702_1403167_1403345_1413845_1414056_1414614
transcript_51246.known	chr16	+	379	2	FSM	ENSG00000260132.1	ENST00000568554.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATTAGGAACCTTGTAAAA	NA	False	NA	NA	False	AATAAA	-18	NA	1408833	1412248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1408893_1411928
transcript_51247.known	chr16	+	386	3	FSM	ENSG00000090581.11	ENST00000527137.2	386	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	12	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTCCTTTCCTTTCCGA	1347990	True	NA	NA	False	ATTAAA	-16	NA	1351950	1352499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1352018_1352101_1352160_1352238
transcript_51248.known	chr16	-	917	2	FSM	ENSG00000174109.5	ENST00000442039.3	917	2	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	0	2400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-1418544	True	NA	-7	True	AATAAA	-22	NA	1420747	1419751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1420613_1420691
transcript_51249.known	chr16	-	1005	1	FSM	ENSG00000174109.5	ENST00000563974.1	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1571	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGATGATTCCCTTTTTTT	-1418553	True	NA	-7	True	AATAAA	-22	NA	1420756	1419751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1419800_1420800
transcript_51253.known	chr16	+	3314	21	FSM	ENSG00000100726.15	ENST00000262319.11	3314	21	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	77.2369082757719	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACAGGAGTGTTGGTGGCC	1490979	True	NA	NA	False	AATAAA	-15	NA	1493359	1510454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1493606_1494245_1494617_1495345_1495624_1497035_1497105_1497360_1497509_1499230_1499334_1500095_1500165_1500346_1500489_1500562_1500700_1501419_1501500_1501662_1501774_1502046_1502136_1502312_1502405_1502644_1502762_1502930_1503003_1505409_1505602_1506237_1506330_1506951_1507052_1507305_1507371_1507600_1507717_1509829
transcript_51262.known	chr16	+	593	6	FSM	ENSG00000206053.13	ENST00000566742.5	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	418.873441507098	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTCACACCTGTCCAATT	1655009	True	NA	NA	False	NA	NA	NA	1678289	1700225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810_1698844_1700073
transcript_51268.known	chr16	+	3185	6	FSM	ENSG00000206053.13	ENST00000562684.5	3185	6	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_1	486.775759462198	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGCCTTGTTTTGTTTTG	1654996	True	NA	85	True	NA	NA	NA	1678276	1701490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_51271.known	chr16	+	3695	5	FSM	ENSG00000206053.13	ENST00000248098.8	3695	5	0	0	0	0	multi-exon	FALSE	canonical	3	1014	junction_4	39.2460189063808	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTAGCTATTTTCATAT	1654998	True	NA	24	True	AATAAA	-32	NA	1678278	1702086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1685438_1685588_1691842_1691986_1697811_1697861_1698810
transcript_51279.known	chr16	+	782	5	FSM	ENSG00000206053.13	ENST00000569765.5	782	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	417.936822378694	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGTGGGGAGGTGGGGCAG	1655032	True	NA	NA	False	NA	NA	NA	1678312	1699266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1683508_1683593_1685438_1685588_1697811_1697861_1698810
transcript_51280.known	chr16	+	1065	4	FSM	ENSG00000206053.13	ENST00000561516.5	1065	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	477.883528348348	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGCCCTGACCCTCT	1654998	True	NA	44	True	NA	NA	NA	1678278	1699599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1685438_1685588_1697811_1697861_1698810
transcript_51284.known	chr16	+	911	4	FSM	ENSG00000206053.13	ENST00000569256.5	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	459.290273743692	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCGCTTCCATTCTGGAGA	1654975	True	NA	NA	False	NA	NA	NA	1678255	1699428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1678357_1691842_1691986_1697811_1697861_1698810
transcript_5129.known	chr1	+	1742	10	FSM	ENSG00000178028.14	ENST00000372289.7	1742	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	98.6510247861522	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGCTGCTTCCTTTTCCT	44208773	True	NA	17	True	AATAGA	-15	NA	44213470	44220673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44213859_44214349_44214442_44214702_44214899_44218310_44218470_44218587_44218756_44219055_44219242_44219405_44219478_44219805_44219879_44220016_44220310_44220558
transcript_51297.known	chr16	-	811	5	FSM	ENSG00000103024.8	ENST00000564628.1	811	5	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_3	189.285993935103	2112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTACGACGTTAAGACATTT	-1771416	False	NA	-6	True	AATAAA	-40	NA	1771495	1770319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771172_1771268_1771411_1771488
transcript_51299.known	chr16	-	813	5	FSM	ENSG00000103024.8	ENST00000568561.5	813	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	202.341913601705	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGCCCAGGAACAGG	-1771431	False	39727	-28	True	AATAAA	-18	NA	1771510	1770341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771192_1771279_1771411_1771488
transcript_51303.known	chr16	-	913	4	FSM	ENSG00000103024.8	ENST00000566600.1	913	4	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_3	52.5124323903926	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTTTTTTTATAATAAAGT	-1771478	False	39727	-63	True	NA	NA	NA	1771557	1770376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1770994_1771069_1771411_1771488
transcript_51307.known	chr16	-	891	3	FSM	ENSG00000103024.8	ENST00000563367.1	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_2	64	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGAGGAGCTGCTCCAGGA	-1771464	False	39727	-147	True	NA	NA	NA	1771543	1770460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1770767_1770880_1771411_1771488
transcript_51308.known	chr16	+	722	1	FSM	ENSG00000275092.1	ENST00000621884.1	722	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTATCATTCCTCCTTT	1704955	False	NA	NA	False	TATAAA	-14	NA	1707251	1707973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1707300_1708000
transcript_51309.known	chr16	-	468	2	FSM	ENSG00000261399.2	ENST00000570022.2	479	2	11	0	11	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAAGCATCTTCCTTTCT	NA	False	NA	NA	False	ATTAAA	-18	NA	1714208	1713526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1713788_1714001
transcript_5131.known	chr1	-	1733	9	FSM	ENSG00000117419.16	ENST00000372257.7	1733	9	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_8	337.182813915538	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	-44347565	True	NA	-5	True	AATAAA	-39	NA	44355257	44221069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44352849_44352926_44354891
transcript_51315.known	chr16	+	1349	7	FSM	ENSG00000095906.17	ENST00000262302.14	1349	7	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	113.598342124053	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	1771801	True	NA	16	True	ATTAAA	-25	NA	1782959	1789186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_51320.known	chr16	+	815	6	FSM	ENSG00000095906.17	ENST00000565134.5	815	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	116.460465394914	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACGACTTCATCCAGGAG	1771848	True	NA	NA	False	NA	NA	NA	1783006	1788613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1786756_1786956_1787676_1787832_1787940_1788208_1788568
transcript_51322.known	chr16	+	1173	6	FSM	ENSG00000095906.17	ENST00000568834.5	1173	6	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	207.513854959133	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGATCTGATGTTTCTAGA	1771773	True	NA	11	True	ATTAAA	-20	NA	1782931	1789181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_51323.known	chr16	+	582	6	FSM	ENSG00000095906.17	ENST00000569898.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	290.235352774261	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGGACGCGACGCCCG	1771840	True	NA	NA	False	NA	NA	NA	1782998	1788680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786656_1787676_1787832_1787940_1788052_1788160_1788208_1788568
transcript_51324.known	chr16	+	995	6	FSM	ENSG00000095906.17	ENST00000565603.5	995	6	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_2	107.343187953405	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCAGAGAAACAGAGGCCT	1771837	True	NA	NA	False	NA	NA	NA	1782995	1788767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1786956_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_51327.known	chr16	+	2196	5	FSM	ENSG00000095906.17	ENST00000567700.5	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	541	junction_1	74.5800744166966	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATCTGATGTTTCTAGAGT	1771773	True	NA	13	True	ATTAAA	-22	NA	1782931	1789183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1783037_1786536_1787832_1787940_1788052_1788137_1788208_1788568
transcript_51328.nnic	chr16	+	1188	5	NIC	ENSG00000095906.17	novel	1349	7	NA	NA	-129	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	301.073080829223	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTTTCTAGAGTCTT	1782789	False	NA	16	True	ATTAAA	-25	NA	1782802	1789186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_1783037_1787676_1787832_1787940_1788052_1788137_1788208_1788568
transcript_51331.known	chr16	-	1040	3	FSM	ENSG00000074071.15	ENST00000177742.7	1040	3	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	1257	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCGTGGTGTCTTTGCGCT	-1733423	True	NA	-4	True	AATAAA	-19	NA	1773150	1771889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1772535_1772603_1772647_1772798
transcript_51332.known	chr16	-	998	3	FSM	ENSG00000074071.15	ENST00000397375.7	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	2790	junction_2	74	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGGTCGTGGTGTCTTT	-1733407	True	NA	-9	True	AATAAA	-14	NA	1773134	1771894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1772514_1772603_1772647_1772798
transcript_51336.known	chr16	-	713	2	FSM	ENSG00000074071.15	ENST00000569585.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_1	0	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCAGGGTCGTGGTGTCTT	-1769628	False	NA	-10	True	AATAAA	-13	NA	1772698	1771895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1772514_1772603
transcript_51337.known	chr16	-	1535	7	FSM	ENSG00000162032.16	ENST00000566339.6	1535	7	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	74.2914680311422	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGCGTGAGCTGAAACGT	-1779501	True	NA	-2	True	AATAAA	-25	NA	1782571	1776711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778322_1778434_1778613_1781357_1781496_1782501
transcript_51338.known	chr16	-	1628	6	FSM	ENSG00000162032.16	ENST00000567868.5	1628	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	71.2336998898695	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-1779487	True	NA	-8	True	AATAAA	-19	NA	1782557	1776717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778049_1778133_1778613_1781357_1781496_1782501
transcript_51339.known	chr16	-	1746	5	FSM	ENSG00000162032.16	ENST00000563741.5	1746	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_4	77.9274502341761	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAACACCCACATGGCGTGA	-1779524	True	NA	-12	True	AATAAA	-15	NA	1782594	1776721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1777873_1777945_1778613_1781357_1781496_1782501
transcript_51340.known	chr16	-	1781	4	FSM	ENSG00000162032.16	ENST00000569380.5	1781	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	89.9382504215469	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCACATGGCGTGAGCTG	-1779482	True	NA	-8	True	AATAAA	-19	NA	1782552	1776717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1777444_1777746_1778613_1781357_1781496_1782501
transcript_51341.known	chr16	-	520	2	FSM	ENSG00000162032.16	ENST00000568416.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTACGGGGCTGGGCACT	-1779497	True	NA	NA	False	NA	NA	NA	1782567	1781041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1781496_1782501
transcript_51342.known	chr16	-	1257	10	FSM	ENSG00000063854.13	ENST00000397353.6	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	77.2395663975656	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCCTTGCAGACTGTTT	-1825101	True	NA	-5	True	NA	NA	NA	1826841	1809102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1809383_1809753_1809834_1816892_1816995_1817167_1817272_1819114_1819224_1819896_1820015_1822299_1822365_1822864_1823038_1826506_1826603_1826711
transcript_51344.known	chr16	+	1974	1	FSM	ENSG00000180185.12	ENST00000427358.4	1974	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAAGGGTAATTTTTTT	1826715	True	NA	11	True	AATAAA	-20	NA	1826940	1828914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1826900_1828900
transcript_51346.known	chr16	-	1363	5	NNC	ENSG00000198736.13	novel	550	5	NA	NA	-94	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	145.07131866775	689	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTACTGTCTTTTTTTTTG	-1938262	True	NA	-10	True	AATGAA	-9	NA	1943293	1938233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_1939144_1940777_1940812_1940814_1940893_1941256_1941406_1943101
transcript_51347.known	chr16	-	550	5	FSM	ENSG00000198736.13	ENST00000564908.1	550	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	159.204860164506	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCCAGACGGCCACCACAC	-1938168	True	NA	NA	False	AAGAAA	-41	NA	1943199	1939094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1939144_1940777_1940893_1941028_1941168_1941256_1941406_1943101
transcript_51349.known	chr16	-	1277	4	FSM	ENSG00000198736.13	ENST00000361871.8	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_3	21.202725191719	2393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTTTTTTTGTTTTG	-1938168	True	NA	-5	True	AATGAA	-14	NA	1943199	1938228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1939144_1940777_1940893_1941256_1941406_1943101
transcript_51350.known	chr16	-	373	3	FSM	ENSG00000198736.13	ENST00000473663.1	373	3	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	146.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGACTCATTTGCTGA	-1938092	False	NA	-11	True	NA	NA	NA	1943123	1938941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1939144_1941256_1941406_1943101
transcript_51353.known	chr16	-	2145	10	FSM	ENSG00000140986.8	ENST00000268661.8	2145	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.98761597999981	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCGTGGTGGCGCATG	-1952480	False	NA	NA	False	ATTAAA	-13	NA	1954689	1943973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1944894_1945498_1945619_1945834_1945931_1946624_1946727_1946937_1947099_1947193_1947381_1950843_1950980_1952873_1953043_1953955_1954149_1954628
transcript_51354.nnic	chr16	+	602	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACCTCTGCTCCGCAA	NA	False	NA	NA	False	NA	NA	NA	1943480	1944557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_1943756_1944230
transcript_51356.nnic	chr16	+	678	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	0	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCTGTGTGAATT	NA	False	NA	NA	False	AATAAA	-24	NA	1943480	1944633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_1943756_1944230
transcript_51358.nnic	chr16	+	437	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAACCTCTGCTCCGC	1943393	True	NA	NA	False	NA	NA	NA	1943488	1944555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_1943756_1944385
transcript_51360.nnic	chr16	+	515	2	Antisense	novelGene_ENSG00000140986.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCTCTGTGTGAATT	1943393	True	NA	NA	False	AATAAA	-24	NA	1943488	1944633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_1943756_1944385
transcript_51367.known	chr16	+	675	4	FSM	ENSG00000140990.15	ENST00000268668.11	675	4	0	0	0	0	multi-exon	FALSE	canonical	3	2271	junction_3	200.769076857524	13418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920771	True	NA	25	True	TATAAA	-14	NA	1959537	1961975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1959755_1961152_1961292_1961496_1961637_1961796
transcript_51368.known	chr16	+	628	4	FSM	ENSG00000140990.15	ENST00000569148.1	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	1138.434402541	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920785	True	NA	25	True	TATAAA	-14	NA	1959551	1961975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1959755_1961152_1961259_1961496_1961637_1961796
transcript_51369.known	chr16	+	830	3	FSM	ENSG00000140990.15	ENST00000543683.6	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	2629	junction_1	56.5	567	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTCTGGTGTGATC	1920776	True	NA	25	True	TATAAA	-14	NA	1959542	1961975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1959755_1961152_1961292_1961496
transcript_5137.nnic	chr1	-	1389	8	NNC	ENSG00000117419.16	novel	1733	9	NA	NA	-97	0	at_least_one_novel_splicesite	FALSE	canonical	3	135	junction_7	366.026317778001	1740	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGAGGCTGCT	NA	False	NA	-5	True	AATAAA	-39	NA	44355357	44221069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_44221641_44247938_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44339044_44339323_44355259
transcript_51372.known	chr16	-	945	7	FSM	ENSG00000140988.16	ENST00000343262.9	945	7	0	0	0	0	multi-exon	FALSE	canonical	3	35178	junction_6	8060.65561160436	9629	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTTTTTTCCCGTGTCCT	-1202565	True	NA	-24	True	AATAAA	-18	NA	1964826	1962057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1963148_1963257_1964275_1964366_1964448_1964629_1964806
transcript_51378.known	chr16	-	993	5	FSM	ENSG00000140988.16	ENST00000529806.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	2	567	junction_4	26572.078601184	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGTGAATTAAGCGTGTT	-1964669	False	NA	-45	True	AAGAAA	-3	NA	1964812	1962078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962266_1962496_1962657_1962735_1962910_1963148_1963257_1964448
transcript_51394.known	chr16	-	170	3	FSM	ENSG00000140988.16	ENST00000563194.1	170	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	18966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTTTGAAGATTATGCC	-1964698	False	NA	NA	False	NA	NA	NA	1964841	1963211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1963257_1964275_1964366_1964806
transcript_51395.known	chr16	-	878	3	FSM	ENSG00000140988.16	ENST00000526586.6	878	3	0	0	0	0	multi-exon	FALSE	canonical	3	53482	junction_1	548	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1963113	False	NA	-27	True	AATAAA	-15	NA	1963256	1962060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962657_1962735_1962910_1963148
transcript_51396.known	chr16	-	625	4	FSM	ENSG00000140988.16	ENST00000533186.5	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	1743	junction_3	24644.6140746592	6765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTGTTTTTTTCCCGTGT	-1964213	False	NA	-27	True	AATAAA	-15	NA	1964356	1962060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1962271_1962496_1962657_1962735_1962910_1964275
transcript_51397.known	chr16	+	275	2	FSM	ENSG00000255198.5	ENST00000531523.2	335	2	60	0	60	0	multi-exon	FALSE	canonical	3	499	junction_1	0	2351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCGGGTGTTCTTGGG	1964293	True	NA	15	True	AATAAA	-20	NA	1964958	1965509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1965130_1965405
transcript_51398.known	chr16	+	471	1	FSM	ENSG00000255198.5	ENST00000564014.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGCATGCGGGTGTTC	1964368	True	NA	10	True	AATAAA	-15	NA	1965033	1965504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1965000_1965500
transcript_51399.known	chr16	-	242	1	FSM	ENSG00000277602.1	ENST00000618631.1	242	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCATGTATTGAGCACCTT	-1971669	False	227	NA	False	AATAAA	-19	NA	1971896	1971654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_1971700_1971900
transcript_51402.known	chr16	+	6783	22	FSM	ENSG00000183751.16	ENST00000568546.6	6783	22	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_10	34.6318506488619	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATCCACTCCCCATATGA	1966835	True	NA	NA	False	NA	NA	NA	1972052	1982929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1972206_1974055_1974108_1974196_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_51408.known	chr16	+	2594	21	FSM	ENSG00000183751.16	ENST00000569628.5	2594	21	0	0	0	0	multi-exon	FALSE	canonical	3	496	junction_9	35.0341262200158	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGTCCGGCCTCTCTCCA	1966868	True	NA	15	True	CATAAA	-15	NA	1972085	1978684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1972206_1974055_1974293_1974375_1974424_1974537_1974680_1974762_1974848_1974927_1975099_1975186_1975263_1975344_1975439_1975528_1975711_1975807_1975950_1976055_1976115_1976210_1976315_1976813_1976962_1977053_1977285_1977355_1977427_1977513_1977671_1977741_1977801_1977957_1978062_1978148_1978221_1978312_1978472_1978551
transcript_51417.known	chr16	+	2365	3	FSM	ENSG00000127554.13	ENST00000248114.7	2365	3	0	0	0	0	multi-exon	FALSE	canonical	3	312	junction_1	17.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTTTTTCTTTTTGTTGT	1977716	True	NA	30	True	AATAAA	-20	NA	1984192	1987749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1984477_1984746_1984944_1985865
transcript_51420.known	chr16	+	483	2	FSM	ENSG00000127554.13	ENST00000567719.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTGTGTCTCAGTTGGG	1984688	False	NA	9	True	ATTAAA	-18	NA	1984710	1986115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1984944_1985865
transcript_51421.known	chr16	+	752	2	FSM	ENSG00000127561.16	ENST00000564642.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCACTGCCCAGGACGTG	1990127	True	NA	NA	False	NA	NA	NA	1992462	1993298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_1992779_1992862
transcript_51422.nic	chr16	-	1516	4	ISM	ENSG00000167962.15	ENST00000562988.5	3382	11	9992	1	299	0	3prime_fragment	TRUE	canonical	3	168	junction_1	7.34846922834953	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGCTGGTGTTCTGAGCTT	-1997836	False	NA	-8	True	AATAAA	-21	NA	1999772	1997654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_1998586_1998701_1998853_1998964_1999122_1999495
transcript_51425.nnic	chr16	+	507	2	NNC	ENSG00000183971.10	novel	398	3	NA	NA	-49	-10004	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTACTTACTTTATTTGAG	2009719	True	NA	NA	False	AGTAAA	-20	NA	2009876	2010588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_2010103_2010307
transcript_51426.known	chr16	+	751	2	FSM	ENSG00000183971.10	ENST00000566435.4	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTTCGTCTGCTTGTGTA	2017092	True	NA	18	True	AATAAA	-32	NA	2019784	2020755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2020313_2020532
transcript_51427.known	chr16	+	2160	7	FSM	ENSG00000065054.14	ENST00000424542.7	2160	7	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_3	28.014381227426	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACACGCCTCTGTCTTTT	2024595	True	NA	10	True	GATAAA	-17	NA	2026901	2039026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2027219_2029581_2029783_2036323_2036504_2036727_2036882_2036954_2036999_2037537_2037601_2037825
transcript_51439.known	chr16	-	837	6	FSM	ENSG00000065057.9	ENST00000568513.5	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	262.540968231627	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	-2041527	True	NA	-7	True	AATAAA	-17	NA	2047794	2039820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046279_2046367_2047708
transcript_51440.known	chr16	-	802	5	FSM	ENSG00000065057.9	ENST00000651583.1	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	283.617149516738	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGGATCTGGCTGATGT	-2041511	True	NA	-7	True	AATAAA	-17	NA	2047778	2039820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2046127_2046367_2047708
transcript_51441.known	chr16	-	1030	6	FSM	ENSG00000065057.9	ENST00000651570.2	1030	6	0	0	0	0	multi-exon	FALSE	canonical	3	617	junction_3	22.7209154745138	7334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGGATCTGGCTGATGTC	-2041567	True	NA	-6	True	AATAAA	-18	NA	2047834	2039819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2040048_2040132_2040239_2043566_2043727_2044629_2044801_2046127_2046367_2047708
transcript_51445.known	chr16	+	1922	9	FSM	ENSG00000167964.13	ENST00000564426.5	1922	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	16.6240601238085	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGTCTGTCTCATCTGTTG	NA	False	NA	5	True	AATAAA	-15	NA	2148272	2154139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2148325_2148791_2148979_2149940_2150052_2151129_2151316_2151568_2151611_2151694_2151762_2151855_2151909_2152819_2153223_2153318
transcript_51447.known	chr16	-	342	2	FSM	ENSG00000260260.2	ENST00000563192.2	394	2	47	5	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	11668	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTCAAGTGTCTTTA	-2149463	True	NA	-1	True	AATAAA	-23	NA	2155358	2154796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2154923_2155142
transcript_51449.known	chr16	+	3683	21	FSM	ENSG00000131653.13	ENST00000326181.11	3683	21	0	0	0	0	multi-exon	TRUE	canonical	3	969	junction_5	92.2297538758507	283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGGGGGTGCGGTGGG	2146535	True	NA	15	True	AATAAA	-21	NA	2155781	2178129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263_2171357_2171571_2171606_2172190_2172375_2172464_2172600_2173181_2173400_2173480_2173555_2173787_2173837_2173920_2174049_2174250_2174334_2175110_2175151_2175300_2175418_2175499_2175623_2175833_2175954_2176048_2176181_2176264_2176385_2176559
transcript_51456.known	chr16	+	799	4	FSM	ENSG00000131653.13	ENST00000565383.5	799	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	479.068772608786	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGCTGCTGGGTAGGGAA	2146451	True	NA	10	True	AATAAA	-21	NA	2155697	2168515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2155859_2163882_2164002_2165856_2165937_2168076
transcript_51457.known	chr16	+	666	4	FSM	ENSG00000131653.13	ENST00000567653.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	85.5375161357089	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCTTTGCTGCTGGGTA	2146557	True	NA	5	True	AATAAA	-16	NA	2155803	2168510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076
transcript_51458.known	chr16	+	586	6	FSM	ENSG00000131653.13	ENST00000569686.5	586	6	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_5	81.3992628959255	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGCCAGAGGCCCCCA	2146531	True	NA	NA	False	NA	NA	NA	2155777	2171382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2155859_2163882_2164002_2165878_2165937_2168076_2168169_2170613_2170731_2171263
transcript_51466.known	chr16	+	1671	9	FSM	ENSG00000167965.18	ENST00000569417.6	1671	9	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	139.865504592805	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGGCGAGGGTGCCG	2199266	True	NA	29	True	GATAAA	-19	NA	2205453	2209453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_51471.known	chr16	+	1861	9	FSM	ENSG00000167965.18	ENST00000564088.5	1861	9	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	170.90768707112	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTGCTCGGGAAGCAG	NA	False	NA	7	True	AATAAA	-16	NA	2205176	2209396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_51474.known	chr16	+	1691	9	FSM	ENSG00000167965.18	ENST00000397124.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	127.60485884166	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTGCTCGGGAAGCAGA	2203731	True	NA	8	True	AATAAA	-17	NA	2205740	2209397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205876_2206030_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_51475.known	chr16	+	1588	9	FSM	ENSG00000167965.18	ENST00000565250.1	1588	9	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	184.059772900001	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGGGGCTCAGTCTGGGA	2203759	False	NA	-37	True	NA	NA	NA	2205768	2209352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205876_2206060_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_51479.known	chr16	+	1403	8	FSM	ENSG00000167965.18	ENST00000565330.5	1403	8	0	0	0	0	multi-exon	FALSE	canonical	3	226	junction_1	148.199121427344	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTGGGCTAGCCTGCACT	2199266	True	NA	NA	False	NA	NA	NA	2205453	2209098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206030_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_51481.known	chr16	+	1865	8	FSM	ENSG00000167965.18	ENST00000568542.5	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_1	180.9963355137	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGATGTTGCTCGGGAAG	2205245	True	NA	4	True	AATAAA	-13	NA	2205256	2209393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2205513_2206060_2206215_2206357_2206660_2207034_2207111_2207192_2207346_2208209_2208335_2208449_2208614_2208758
transcript_51488.known	chr16	-	826	6	FSM	ENSG00000182685.8	ENST00000328540.8	826	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	11.034491379307	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGGTGGTGTTCTCTA	-2204821	False	NA	0	True	AATAAA	-15	NA	2210863	2209252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2209457_2209552_2209707_2209949_2210052_2210125_2210282_2210521_2210651_2210782
transcript_51490.known	chr16	+	1646	7	FSM	ENSG00000167965.18	ENST00000563067.5	1646	7	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_5	65.7150836735541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGTAATAAAAGCAGACCG	2205647	False	NA	-19	True	GGGGCT	-9	NA	2206028	2209370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2206215_2206357_2206410_2206496_2206660_2207034_2207111_2207192_2207346_2208209_2208614_2208758
transcript_51491.known	chr16	-	3164	2	FSM	ENSG00000184207.9	ENST00000333503.8	3164	2	0	0	0	0	multi-exon	FALSE	canonical	3	1460	junction_1	0	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCGGGACTT	-2208798	True	NA	NA	False	ACTAAA	-3	NA	2214840	2211592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2214054_2214137
transcript_51492.known	chr16	+	2548	14	FSM	ENSG00000167967.16	ENST00000301727.9	2548	14	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_8	28.1872437471132	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTGATGTTGTGGCAGT	2222137	True	NA	15	True	AATAAA	-16	NA	2223590	2235742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2223771_2228371_2228524_2229569_2229676_2232170_2232365_2232455_2232577_2232755_2232909_2233010_2233184_2233437_2233648_2233881_2233991_2234170_2234389_2234582_2234782_2234858_2235002_2235080_2235144_2235215
transcript_51494.known	chr16	+	1349	7	FSM	ENSG00000167968.13	ENST00000320700.10	1349	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.21335164821342	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCTCCCAGGCCTCTG	2236423	True	NA	NA	False	AATAAA	-27	NA	2236443	2238711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2236561_2236777_2236961_2237037_2237127_2237217_2237302_2237375_2237650_2237766_2238019_2238361
transcript_51499.known	chr16	-	961	6	FSM	ENSG00000167969.13	ENST00000566379.1	961	6	0	0	0	0	multi-exon	FALSE	canonical	3	957	junction_2	50.7369687703158	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATCCAGAAGTCCCTGC	-2243575	True	NA	NA	False	NA	NA	NA	2251591	2240036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2240146_2243045_2243225_2243317_2243440_2244405_2244553_2246858_2246987_2251315
transcript_5150.known	chr1	-	764	6	FSM	ENSG00000117419.16	ENST00000452396.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	433.905704041788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGCCTCAGCCTGCAAC	-44347568	True	NA	NA	False	NA	NA	NA	44355260	44247985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44248039_44284834_44284908_44308309_44308402_44313168_44313229_44319627_44319745_44354891
transcript_51502.known	chr16	-	1951	8	FSM	ENSG00000205937.12	ENST00000320225.10	1951	8	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_7	960.07244624602	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGTTCTGGGTTCACTGC	-2267478	False	NA	75	True	AATAAA	-20	NA	2268126	2253119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2264572_2264761_2268054
transcript_51505.known	chr16	-	918	7	FSM	ENSG00000205937.12	ENST00000569598.6	918	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	1363.78094730137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGCACCCCTCTGCCAG	-2240822	True	NA	NA	False	NA	NA	NA	2268095	2253839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263162_2264572_2264761_2268054
transcript_51511.nnic	chr16	+	758	3	NIC	ENSG00000260778.5	novel	543	2	NA	NA	2	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACTGTGACCTGGGGTTTT	NA	False	NA	5	True	AATAAA	-14	NA	2268156	2273419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2268266_2271675_2271892_2272986
transcript_51512.nnic	chr16	-	1032	3	NNC	ENSG00000205937.12	novel	1276	9	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	451	947	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGGTTCACTGCCTTC	-2240844	True	NA	79	True	AATAAA	-24	NA	2268117	2253115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_2253995_2264670_2264761_2268054
transcript_51513.nic	chr16	-	695	3	ISM	ENSG00000205937.12	ENST00000564311.5	870	7	-35	8256	0	0	5prime_fragment	FALSE	canonical	3	902	junction_2	295	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAGTAATTTGTAAAATTA	-2267478	False	NA	NA	False	AAAACA	-30	NA	2268126	2263896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_2264332_2264572_2264761_2268054
transcript_51514.known	chr16	+	543	2	FSM	ENSG00000260778.5	ENST00000563734.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTGTGACCTGGGGTTT	NA	False	NA	4	True	AATAAA	-13	NA	2268154	2273418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2268266_2272986
transcript_51515.known	chr16	-	1826	1	FSM	ENSG00000205937.12	ENST00000566783.1	1826	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAG	-2266680	False	NA	NA	False	NA	NA	NA	2267328	2265502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2265500_2267300
transcript_51516.known	chr16	-	2037	7	FSM	ENSG00000205937.12	ENST00000566458.5	2037	7	0	0	0	0	multi-exon	FALSE	canonical	3	1433	junction_6	696.613873597769	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTCTGGGTTCACTGCCTT	-2267749	True	NA	78	True	AATAAA	-23	NA	2268397	2253116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2254064_2255584_2255727_2262277_2262432_2262739_2262843_2263095_2263288_2264175_2264332_2268054
transcript_51517.known	chr16	+	1700	3	FSM	ENSG00000238098.9	ENST00000482286.5	1700	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTCACTTTCTTGCTTCT	NA	False	NA	NA	False	AATAAA	-12	NA	2340970	2362666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2341374_2361115_2361201_2361454
transcript_51518.known	chr16	+	4230	17	FSM	ENSG00000162063.13	ENST00000397066.9	4230	17	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_1	32.8718510849328	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGAGTGATGGACGTCCTT	2424727	True	NA	30	True	ATTAAA	-20	NA	2429446	2458854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2429498_2431129_2431285_2432960_2433068_2435805_2435874_2437128_2437323_2438069_2438124_2439352_2439458_2439748_2439827_2443648_2443801_2445457_2445623_2448854_2448979_2449281_2449463_2449827_2449916_2453209_2453310_2453409_2453538_2455394_2455565_2456544
transcript_51524.known	chr16	-	544	3	FSM	ENSG00000260874.5	ENST00000565827.1	544	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTTGGGGCAGGGCCC	-2459874	True	NA	NA	False	NA	NA	NA	2459979	2456834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2456967_2458809_2458955_2459712
transcript_51528.known	chr16	+	1633	10	FSM	ENSG00000162062.15	ENST00000361837.9	1633	10	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	37.0618435444539	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456231	True	NA	17	True	ATTAAA	-17	NA	2460108	2464963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_51531.known	chr16	+	1864	9	FSM	ENSG00000162062.15	ENST00000563531.5	1864	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	35.5824307067407	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGCTTGTGTGATATTAAA	2456256	True	NA	-19	True	NA	NA	NA	2460133	2464927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2460171_2460282_2460382_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_51535.nic	chr16	+	1560	9	NIC	ENSG00000162062.15	novel	1633	10	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	74.7394432344796	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTTATGTTTT	2456205	True	NA	17	True	ATTAAA	-17	NA	2460082	2464963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038_2464230_2464521
transcript_51537.known	chr16	+	2156	8	FSM	ENSG00000162062.15	ENST00000569994.5	2156	8	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_1	35.1271742009934	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	2456240	True	NA	16	True	ATTAAA	-16	NA	2460117	2464962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2460171_2460282_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_51538.nic	chr16	+	1851	8	NIC	ENSG00000162062.15	novel	2156	8	NA	NA	-3	0	intron_retention	FALSE	canonical	3	20	junction_1	78.8216793963256	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTGTTTATTTATGTTT	2456205	True	NA	16	True	ATTAAA	-16	NA	2460082	2464962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2460171_2460622_2460694_2460815_2461225_2461746_2461801_2462148_2462240_2462414_2462527_2462630_2462733_2464038
transcript_51550.known	chr16	+	1093	3	FSM	ENSG00000185883.12	ENST00000330398.9	1093	3	0	0	0	0	multi-exon	FALSE	canonical	3	1482	junction_1	27	1733	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGCCTGTGTCTGCTCAGC	2497202	True	NA	23	True	AATAAA	-15	NA	2513951	2520218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2514183_2519217_2519402_2519540
transcript_51551.known	chr16	+	3172	11	FSM	ENSG00000162066.16	ENST00000293971.11	3172	11	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_8	26.6915717034423	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGCAGTTCTGTGACAT	2517578	True	NA	26	True	AATACA	-22	NA	2520370	2531417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2520542_2520768_2520906_2520983_2521124_2527560_2527616_2527772_2527986_2528059_2528149_2528235_2528381_2528451_2528560_2528649_2528719_2528993_2529096_2529474
transcript_51552.known	chr16	+	7184	14	FSM	ENSG00000140992.19	ENST00000342085.9	7184	14	0	0	0	0	multi-exon	TRUE	canonical	3	43	junction_11	7.26424330327879	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGTTTGCTGGCGTGGCTC	2536732	True	NA	4	True	AATAAA	-17	NA	2538020	2603188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2538137_2557702_2557964_2561479_2561523_2561770_2561909_2565552_2565698_2566355_2566454_2577424_2577501_2581294_2581364_2581606_2581704_2583411_2583586_2586675_2586894_2595792_2595851_2597122_2597276_2597650
transcript_51553.known	chr16	-	2001	1	FSM	ENSG00000261613.2	ENST00000563449.2	2001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTCTAAACGTTTATTTGT	NA	False	NA	NA	False	AATAAA	-33	NA	2556060	2554059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2554100_2556100
transcript_51554.nnic	chr16	+	995	4	NNC	ENSG00000215154.6	novel	2748	4	NA	NA	2	-1283	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.0426999794995	117	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAAATTGTGCA	NA	False	NA	NA	False	AAAAAG	-7	NA	2603351	2629211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_2603728_2610461_2610585_2613959_2614069_2628824
transcript_51557.known	chr16	+	2748	4	FSM	ENSG00000215154.6	ENST00000399702.5	2748	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	2.49443825784929	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAGAAAATAAGTTACTA	NA	False	NA	NA	False	AATAAA	-23	NA	2603349	2630494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2603728_2610461_2611053_2613959_2614069_2628824
transcript_51562.nic	chr16	+	787	3	NIC	ENSG00000215154.6	novel	2748	4	NA	NA	17	-1283	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	29	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAAAATGAAATTGTGCA	2601231	True	NA	NA	False	AAAAAG	-7	NA	2603436	2629211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_2603728_2613959_2614069_2628824
transcript_51564.known	chr16	-	5775	3	FSM	ENSG00000260565.8	ENST00000671018.1	5775	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGTGCAGGTGGCCGTCCT	-2673130	True	NA	NA	False	AAGAAA	-9	NA	2673421	2667087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2672571_2672706_2672860_2673282
transcript_51566.known	chr16	+	2434	6	FSM	ENSG00000167977.9	ENST00000301738.9	2434	6	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_3	26.8894031172133	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCGTAGTAGCTGTTTAT	2675632	True	NA	16	True	AATAAA	-17	NA	2682522	2709030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2682801_2695934_2696044_2697905_2697998_2699820_2699917_2702352_2702479_2707297
transcript_51567.known	chr16	-	1297	5	FSM	ENSG00000172382.10	ENST00000565903.5	1297	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	4.03112887414927	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGCCCACGTGGGGATC	-2720532	False	NA	-7	True	AATAAA	-17	NA	2720551	2712423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2712815_2713528_2713699_2714064_2714337_2716499_2716527_2720114
transcript_51568.nnic	chr16	-	676	4	NIC	ENSG00000205913.7	novel	818	6	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCGAGCACACAATGAT	NA	False	NA	NA	False	AGTAAA	-28	NA	2752615	2737085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_2737289_2737479_2737611_2743551_2743720_2752441
transcript_51573.known	chr16	+	9044	15	FSM	ENSG00000167978.17	ENST00000301740.13	9044	15	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_12	682.157157666107	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGTCTGTAGACTGTTTA	2752542	False	NA	17	True	AATAAA	-18	NA	2752637	2771412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2752847_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560_2768262_2768996_2769285_2770351_2770466_2770603_2770718_2770857
transcript_51574.known	chr16	+	3314	11	FSM	ENSG00000167978.17	ENST00000576924.5	3314	11	0	0	0	0	multi-exon	TRUE	canonical	3	324	junction_1	444.163269530473	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAGTCTAAAGACTCACT	2752530	False	NA	NA	False	NA	NA	NA	2752625	2763582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2752855_2756333_2756607_2757471_2757580_2757780_2757946_2758469_2758548_2758984_2759048_2759139_2759173_2759351_2759403_2759568_2759662_2760300_2760500_2761560
transcript_51579.known	chr16	+	461	4	FSM	ENSG00000167978.17	ENST00000576415.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_1	712.08348449384	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAGAAAGATAGAGG	2717064	True	NA	39	True	NA	NA	NA	2752713	2758524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2752847_2757471_2757580_2757780_2757946_2758469
transcript_5158.known	chr1	+	916	10	FSM	ENSG00000187147.18	ENST00000475378.5	916	10	0	0	0	0	multi-exon	FALSE	canonical	1	196	junction_5	122.810704483781	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCACCTGCCCCCAGCCT	44631982	True	NA	NA	False	NA	NA	NA	44632254	44650808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44632386_44635544_44635589_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_51583.known	chr16	+	1759	3	FSM	ENSG00000167978.17	ENST00000574331.5	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	33	855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGGTCTGTAGACTGTT	2769346	False	NA	15	True	AATAAA	-16	NA	2769373	2771410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2770466_2770603_2770718_2770857
transcript_51585.known	chr16	-	472	3	FSM	ENSG00000103363.16	ENST00000494946.6	472	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	3639	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTTGCTGCCTCTTTTT	-2700727	True	NA	-5	True	AATAAA	-18	NA	2777127	2771940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2775450_2775626_2776992
transcript_51586.known	chr16	-	974	4	FSM	ENSG00000103363.16	ENST00000409906.9	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	5348	junction_3	1397.77465995059	20770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700880	True	NA	-3	True	AATAAA	-16	NA	2777280	2771413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2775450_2775557_2776992_2777128_2777236
transcript_51587.known	chr16	-	582	5	FSM	ENSG00000103363.16	ENST00000262306.11	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	3294.45192710411	815	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCTGCATTTCTCATTTT	-2700877	True	NA	-3	True	AATAAA	-16	NA	2777277	2771413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2771605_2771993_2772103_2775450_2775557_2776992_2777128_2777236
transcript_51588.known	chr16	-	997	3	FSM	ENSG00000103363.16	ENST00000409477.1	997	3	0	0	0	0	multi-exon	FALSE	canonical	3	7310	junction_1	724.5	5681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCCTGCATTTCTCATTT	-2700795	True	NA	-4	True	AATAAA	-15	NA	2777195	2771414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2775450_2775557_2776992
transcript_51589.known	chr16	-	331	3	FSM	ENSG00000103363.16	ENST00000572954.1	331	3	0	0	0	0	multi-exon	FALSE	canonical	3	411	junction_1	2468.5	1389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTTGCTGCCTCTTT	-2700872	True	NA	-7	True	AATAAA	-16	NA	2777272	2771942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2772103_2776992_2777128_2777236
transcript_5159.nic	chr1	+	1950	10	NIC	ENSG00000187147.18	novel	3099	15	NA	NA	-21	0	combination_of_known_junctions	TRUE	canonical	1	196	junction_5	126.502330042465	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCCTGTGTGTTATGTGT	44625506	False	NA	NA	False	ATTAAA	-16	NA	44632213	44651723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994_44645082_44645220_44645277_44645409_44645489_44649660_44649770_44649882_44649958_44650703
transcript_51591.known	chr16	+	1106	6	FSM	ENSG00000007038.11	ENST00000450020.7	1106	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.24499443206436	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTCATGGACAGC	NA	False	NA	18	True	AATAAA	-39	NA	2817179	2821719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818676_2818970_2820954_2821068_2821365
transcript_51592.known	chr16	+	1091	6	FSM	ENSG00000007038.11	ENST00000005995.8	1091	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.48193472919817	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTTCATGGACAGC	2817162	True	NA	18	True	AATAAA	-39	NA	2817236	2821719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818676_2818970_2820954_2821110_2821365
transcript_51594.known	chr16	+	873	6	FSM	ENSG00000007038.11	ENST00000574813.5	873	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.60768096208106	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGGCCGGTCTGAGC	2817216	False	NA	NA	False	NA	NA	NA	2817290	2821587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2817333_2817429_2817457_2817800_2817967_2818682_2818970_2820980_2821110_2821365
transcript_51600.known	chr16	-	1383	6	FSM	ENSG00000005001.10	ENST00000161006.8	1383	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	4.04969134626332	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTTTTTCCCATGC	-2858147	True	NA	-3	True	AATAAA	-15	NA	2858170	2852729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2853330_2853864_2854023_2855573_2855852_2856081_2856254_2856821_2856849_2858022
transcript_51603.known	chr16	-	683	3	FSM	ENSG00000263280.3	ENST00000659109.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGAGTCATGTTATTTTGCT	-2868178	True	NA	NA	False	AATAAA	-11	NA	2868204	2866351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2866853_2867460_2867530_2868091
transcript_51604.known	chr16	-	667	2	FSM	ENSG00000263280.3	ENST00000575693.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCATGTTATTTTGCTTCAG	-2867592	False	NA	NA	False	AATAAA	-15	NA	2867618	2866347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2866857_2867460
transcript_51611.known	chr16	+	915	4	FSM	ENSG00000162076.13	ENST00000293981.10	915	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	83.6752983595252	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGGCTTCTGGGTCCTT	2880921	True	NA	33	True	AATAAA	-43	NA	2883212	2899382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883273_2895219_2895321_2896351_2896772_2899048
transcript_51612.known	chr16	+	990	4	FSM	ENSG00000162076.13	ENST00000396958.8	990	4	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	4.96655480858378	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGCAGGTTTTAAACATCC	2880923	True	NA	16	True	AATAAA	-26	NA	2883214	2899365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883367_2895219_2895321_2896351_2896772_2899048
transcript_51614.known	chr16	+	754	3	FSM	ENSG00000162076.13	ENST00000572006.1	754	3	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	5	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAGAGCAGTGGCACAGG	2880967	True	NA	NA	False	NA	NA	NA	2883258	2896896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883367_2895219_2895321_2896351
transcript_51618.known	chr16	+	511	2	FSM	ENSG00000162076.13	ENST00000573965.1	511	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCAGCCCCTCAGGAGCCT	2880936	True	NA	NA	False	NA	NA	NA	2883227	2896723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2883367_2896351
transcript_51619.known	chr16	+	643	4	FSM	ENSG00000059122.17	ENST00000573525.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	37.9678226338508	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCACCTTGCAGATCCTGCC	2910815	True	NA	NA	False	NA	NA	NA	2912023	2929916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_2912155_2914175_2914290_2928823_2928918_2929612
transcript_51622.known	chr16	-	1806	9	FSM	ENSG00000127564.17	ENST00000574730.5	1806	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	189.988445372344	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCGTGTCTAATAAAAAGTAT	-2971366	True	NA	-64	True	NA	NA	NA	2980439	2972848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2976825_2979647_2979913_2980285
transcript_51624.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000262300.13	2061	9	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_7	57.0360357581065	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGCTCATGTGGCAACAT	-2971373	True	NA	-23	True	AATAAA	-28	NA	2980446	2972807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_51626.known	chr16	-	1891	9	FSM	ENSG00000127564.17	ENST00000573944.5	1891	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	171.8245835147	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCGTGTCTAATAAAAAGT	-2971406	True	NA	-66	True	NA	NA	NA	2980479	2972850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979913_2980285
transcript_51628.known	chr16	-	2061	9	FSM	ENSG00000127564.17	ENST00000440027.6	2061	9	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_2	181.416948973904	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGCCCTTCCTGTCCCTT	-2980355	False	9073	-6	True	AATAAA	-45	NA	2980391	2972790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137_2973254_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979647_2979913_2980285
transcript_5163.nic	chr1	+	1708	3	NIC	ENSG00000187147.18	novel	594	2	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAAATCTACTTTTTTCTC	44402119	True	NA	NA	False	AATAAA	-25	NA	44405133	44419872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_44405531_44411980_44412723_44419303
transcript_51634.known	chr16	-	1892	9	FSM	ENSG00000127564.17	ENST00000574385.5	1892	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_8	226.08225826013	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCACCCAAGCTTGCTCA	-2971351	True	NA	-34	True	AATAAA	-17	NA	2980424	2972818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_2973065_2973137_2973216_2973999_2974158_2974244_2974418_2974549_2974657_2975318_2975813_2976663_2977032_2979807_2979937_2980285
transcript_51638.known	chr16	+	1269	1	FSM	ENSG00000272079.2	ENST00000607794.2	1269	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGAGTCTGCCCAGGTGTA	3005792	False	NA	6	True	AATAAA	-20	NA	3006119	3007388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3006100_3007400
transcript_51639.known	chr16	+	1583	1	FSM	ENSG00000213937.4	ENST00000445369.3	1583	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCCCTCTAATCTGTGCGC	3012854	True	NA	NA	False	AATAAA	-17	NA	3012922	3014505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3012900_3014500
transcript_51642.known	chr16	+	648	4	FSM	ENSG00000006327.14	ENST00000573001.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	767.787007502008	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGCATTTGCACAGGGGAG	3018406	False	NA	NA	False	AAAACA	-22	NA	3018444	3022086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3018537_3021214_3021320_3021554_3021690_3021770
transcript_5165.nic	chr1	+	760	3	ISM	ENSG00000187147.18	ENST00000488865.2	860	4	230	0	-21	0	3prime_fragment	FALSE	canonical	3	300	junction_2	130.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATCCCTCTTAAGGCTG	44625506	False	NA	19	True	ATTAAA	-22	NA	44632213	44636495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_44632386_44635544_44635667_44636029
transcript_51651.known	chr16	-	1366	2	FSM	ENSG00000184697.7	ENST00000328796.5	1366	2	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_1	0	16529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTGTTGCAGCGGGTTA	-2980523	True	NA	-17	True	AATAAA	-19	NA	3018183	3014711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3016043_3018148
transcript_51652.known	chr16	-	461	3	FSM	ENSG00000184697.7	ENST00000572154.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	1820.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGACGTCCACCCCCCAG	-2980510	True	NA	NA	False	NA	NA	NA	3018170	3014856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3015182_3015928_3016043_3018148
transcript_51653.known	chr16	+	881	3	FSM	ENSG00000006327.14	ENST00000341627.5	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	766.5	4542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010362	True	NA	18	True	AATAAA	-19	NA	3020358	3022383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3020492_3021554_3021690_3021770
transcript_51654.known	chr16	+	977	4	FSM	ENSG00000006327.14	ENST00000326577.9	977	4	0	0	0	0	multi-exon	FALSE	canonical	3	1417	junction_1	109.42374310704	5765	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010371	True	NA	18	True	AATAAA	-19	NA	3020367	3022383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3020492_3021214_3021320_3021554_3021690_3021770
transcript_51655.known	chr16	+	1678	3	FSM	ENSG00000006327.14	ENST00000571351.1	1678	3	0	0	0	0	multi-exon	FALSE	canonical	3	1616	junction_2	28	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTGGAGAGGCAGTGAT	3010393	True	NA	18	True	AATAAA	-19	NA	3020389	3022383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3021320_3021554_3021690_3021770
transcript_51656.known	chr16	+	1300	14	FSM	ENSG00000131652.14	ENST00000574549.5	1300	14	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	318.157472825632	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCTTTCTATGAATGG	3017980	True	NA	64	True	AATAAA	-22	NA	3024040	3027755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3024087_3024192_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_51671.known	chr16	-	495	5	FSM	ENSG00000103145.11	ENST00000573842.1	495	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_4	227.003854592824	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCCAGTCCCCCCTACC	-3024268	False	NA	NA	False	NA	NA	NA	3024286	3022917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846_3023969_3024180
transcript_5168.known	chr1	+	590	5	FSM	ENSG00000187147.18	ENST00000497469.5	590	5	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	110.259636767042	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGTGTGGGCACAGGCTT	44625527	False	NA	NA	False	NA	NA	NA	44632234	44645081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44632386_44635544_44635667_44636029_44636163_44644697_44644795_44644994
transcript_51682.known	chr16	-	610	4	FSM	ENSG00000103145.11	ENST00000572355.5	610	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	299.395316522412	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGGCTTCAGTCTGGAAC	-3024216	False	NA	-10	True	AATAAA	-15	NA	3024234	3022628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3024180
transcript_51686.known	chr16	-	828	4	FSM	ENSG00000103145.11	ENST00000573095.1	828	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_3	260.926554161639	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCTTCAGTCTGGAACCTG	-3024197	False	NA	-7	True	AATAAA	-18	NA	3024215	3022625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023531_3023846_3023969_3024180
transcript_51695.known	chr16	-	765	3	FSM	ENSG00000103145.11	ENST00000354679.3	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	340.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTTCCTTCTTCCCCAC	-3024061	True	NA	NA	False	NA	NA	NA	3024273	3022840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023413_3023846
transcript_51697.known	chr16	-	1199	3	FSM	ENSG00000103145.11	ENST00000576921.1	1199	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	319	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3024057	True	NA	-6	True	AATAAA	-19	NA	3024269	3022624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023969_3024180
transcript_5170.known	chr1	-	1579	4	FSM	ENSG00000126106.14	ENST00000372243.7	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	48.0578355271599	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673265	True	NA	-1	True	AATAAA	-20	NA	44674462	44635237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44636458_44645359_44645465_44660173_44660296_44674330
transcript_51700.known	chr16	-	656	4	FSM	ENSG00000103145.11	ENST00000248089.8	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_3	151.836169018525	3084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3020013	True	NA	-6	True	AATAAA	-19	NA	3023942	3022624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023473_3023531_3023846
transcript_51701.known	chr16	-	618	3	FSM	ENSG00000103145.11	ENST00000574151.5	618	3	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_2	261.5	2443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTCAGTCTGGAACCTGG	-3020032	True	NA	-6	True	AATAAA	-19	NA	3023961	3022624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232_3023362_3023846
transcript_51702.known	chr16	-	1365	2	FSM	ENSG00000103145.11	ENST00000575214.1	1365	2	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCCAAGAAGAACTGAATAAA	-3024243	False	NA	-44	True	NA	NA	NA	3024261	3022662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3022999_3023232
transcript_51703.known	chr16	+	1360	13	FSM	ENSG00000131652.14	ENST00000575576.5	1360	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	247.355625680023	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTACAATAAAGTTTCAGG	3017993	True	NA	31	True	NA	NA	NA	3024053	3027722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3024366_3025711_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027365_3027501_3027576
transcript_51704.known	chr16	-	2032	10	FSM	ENSG00000162069.16	ENST00000572449.6	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	27.2274371422162	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCTGGGGGTGTCGTCA	-3035251	True	NA	92	True	AAAAAG	-28	NA	3036944	3027681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3028274_3028347_3028469_3028699_3028831_3029279_3029430_3029544_3029740_3030448_3030596_3030695_3030813_3030934_3031151_3035214_3035527_3036893
transcript_51705.known	chr16	+	1246	12	FSM	ENSG00000131652.14	ENST00000253952.9	1246	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	267.087783879234	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATGCTCTTTCTTTCTAT	3018003	True	NA	58	True	AATAAA	-16	NA	3024063	3027749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3024366_3025707_3025824_3025923_3025989_3026062_3026167_3026250_3026289_3026364_3026414_3026515_3026588_3026678_3026782_3026866_3026917_3027010_3027074_3027169_3027281_3027576
transcript_51707.known	chr16	+	920	7	FSM	ENSG00000008517.19	ENST00000440815.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.99205898780101	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCGGAGGTGGGTTTCCCA	3065350	False	NA	23	True	AATAAA	-38	NA	3065368	3069551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065495_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_51708.known	chr16	+	674	7	FSM	ENSG00000008517.19	ENST00000530538.6	674	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.66874967458085	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCTGACCCCTCCCTCAG	3065503	True	NA	NA	False	AATGAA	-41	NA	3065652	3069396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065688_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_51709.known	chr16	+	814	7	FSM	ENSG00000008517.19	ENST00000533097.6	814	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.99205898780101	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGGAGATACCATGAT	3065464	True	NA	4	True	AATAAA	-19	NA	3065613	3069532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065656_3065783_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_51710.known	chr16	+	731	7	FSM	ENSG00000008517.19	ENST00000552664.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.99205898780101	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACACTCAGTCCCCCTGCC	3065513	True	NA	-88	True	NA	NA	NA	3065662	3069440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065711_3065780_3065827_3067376_3067416_3067553_3067614_3067983_3068011_3068179_3068240_3068989
transcript_51712.known	chr16	+	1056	6	FSM	ENSG00000008517.19	ENST00000008180.13	1056	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	6.27375485654325	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAGATGGAGTTTCGCT	3065481	True	NA	NA	False	NA	NA	NA	3065630	3069819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_51713.known	chr16	+	1067	6	FSM	ENSG00000008517.19	ENST00000396890.6	1067	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	3.72021504754765	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTATAAAGAAAAGAAGTT	3065489	True	NA	112	True	TATAAA	-20	NA	3065638	3069640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065688_3065783_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_51714.known	chr16	+	774	6	FSM	ENSG00000008517.19	ENST00000530890.5	774	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.49470423263812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCGCGGAGGTGGGTTTC	3065460	True	NA	20	True	AATAAA	-35	NA	3065609	3069548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065656_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_51716.known	chr16	+	623	6	FSM	ENSG00000008517.19	ENST00000552356.5	623	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.21218606705912	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCAGCTGTCCTGTGCCC	3065527	False	NA	NA	False	NA	NA	NA	3065676	3069409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065711_3065783_3065827_3067376_3067416_3067983_3068011_3068179_3068240_3068989
transcript_51718.known	chr16	+	1014	5	FSM	ENSG00000008517.19	ENST00000548476.5	1014	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2.12132034355964	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCTTATACTTCCCTGG	3065512	True	NA	-14	True	AATAAA	-1	NA	3065661	3069514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3065827_3067376_3067614_3067983_3068011_3068179_3068240_3068989
transcript_51721.known	chr16	-	2716	6	FSM	ENSG00000130182.8	ENST00000576985.6	2716	6	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_4	176.978642779291	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3086768	True	NA	-31	True	ATTAAA	-31	NA	3099294	3088889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092048_3092317_3092541_3093005_3099189
transcript_51722.known	chr16	-	2350	5	FSM	ENSG00000130182.8	ENST00000538082.5	2350	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	231.712645317428	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCACTTTCACAGCTG	-3086769	True	NA	-130	True	NA	NA	NA	3099295	3088988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3092541_3093005_3099189
transcript_51724.known	chr16	-	575	4	FSM	ENSG00000130182.8	ENST00000572431.1	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	313.756097771643	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCGGCCGCACGCCTGCCA	-3086702	True	NA	NA	False	NA	NA	NA	3099228	3090233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3090647_3091539_3091598_3091763_3091829_3099189
transcript_51726.nnic	chr16	-	294	3	NNC	ENSG00000130182.8	novel	2716	6	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	229.5	105	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCCCTCTTTATTTCTTT	-3086767	True	NA	-31	True	ATTAAA	-31	NA	3099293	3088889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_3089035_3092959_3093005_3099189
transcript_51729.known	chr16	+	1968	7	FSM	ENSG00000122386.11	ENST00000219091.9	1968	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	15.1152976226809	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111346	True	NA	12	True	ATTAAA	-16	NA	3112585	3120517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3112683_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_51731.known	chr16	+	2062	7	FSM	ENSG00000122386.11	ENST00000382192.7	2062	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	17.8457900419741	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111320	True	NA	12	True	ATTAAA	-16	NA	3112559	3120517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3112683_3113348_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_51732.known	chr16	+	1006	7	FSM	ENSG00000122386.11	ENST00000414351.5	1006	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	20.8865985742054	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAAGCCCAACGAGGAGG	3111555	False	NA	NA	False	NA	NA	NA	3112794	3119496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3112951_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_51733.nnic	chr16	+	2168	7	NNC	ENSG00000122386.11	novel	1968	7	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	21.520661906384	94	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCCCGCCTACACAGCTTT	3111340	True	NA	12	True	ATTAAA	-16	NA	3112579	3120517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_3112877_3113416_3113488_3115354_3115569_3115828_3115921_3116426_3116548_3118904_3119016_3119255
transcript_51739.known	chr16	+	302	3	FSM	ENSG00000263011.2	ENST00000570700.2	305	3	0	3	0	-3	multi-exon	FALSE	canonical	1	1	junction_2	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGATGCTCAGACTTCA	3106685	True	NA	NA	False	AATAAA	-17	NA	3106763	3109576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3106831_3108248_3108332_3109424
transcript_51742.known	chr16	-	1592	3	FSM	ENSG00000263072.9	ENST00000571963.5	1592	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTAGGGTTCTCCAGAAA	-3134222	True	NA	NA	False	NA	NA	NA	3134882	3128671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3129654_3131746_3132104_3134629
transcript_51743.nnic	chr16	+	970	2	NNC	ENSG00000263011.2	novel	305	3	NA	NA	-973	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGATGCTCAGACTTCATTT	3105657	False	NA	NA	False	AATAAA	-20	NA	3105790	3109579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_3106606_3109424
transcript_51745.known	chr16	-	634	2	FSM	ENSG00000263072.9	ENST00000575089.2	688	2	53	1	8	-1	multi-exon	FALSE	canonical	3	41	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCGGATTGCACTTTCTT	-3134167	True	NA	-12	True	CATAAA	-17	NA	3134827	3131667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3132104_3134629
transcript_51746.known	chr16	-	1489	4	FSM	ENSG00000263072.9	ENST00000573447.2	1489	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	15.9652400197707	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATATATTAAATTTTCC	-3134213	True	NA	-33	True	NA	NA	NA	3134873	3128861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3129654_3131746_3132104_3132849_3132946_3134629
transcript_51748.known	chr16	-	3348	5	FSM	ENSG00000010539.12	ENST00000431561.7	3348	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	13.4721935853075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATAGTTTTTGTTTCTTGC	-3234169	True	NA	-5	True	NA	NA	NA	3235167	3222344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_51749.known	chr16	-	3008	5	FSM	ENSG00000010539.12	ENST00000414144.7	3008	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_4	16.1709616287962	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	-3234160	True	NA	-8	True	NA	NA	NA	3235158	3222324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224614_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_5175.known	chr1	-	1472	3	FSM	ENSG00000126106.14	ENST00000372244.3	1472	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATGTTGCTAGGTATCT	-44673280	True	NA	-1	True	AATAAA	-20	NA	44674477	44635237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44636458_44645359_44645465_44674330
transcript_51750.known	chr16	-	2373	5	FSM	ENSG00000010539.12	ENST00000396870.8	2373	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.3637553541853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTCAGACTCTCATTTGT	-3234188	True	NA	-122	True	AATATA	-13	NA	3235186	3223335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234635
transcript_51751.known	chr16	-	1350	5	FSM	ENSG00000010539.12	ENST00000575948.1	1350	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	19.1180542943052	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGGAACCCTTTCTGGG	-3234072	True	NA	NA	False	NA	NA	NA	3235070	3223891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224611_3232420_3232548_3232832_3232922_3233505_3233837_3234986
transcript_51756.known	chr16	-	3082	5	FSM	ENSG00000010539.12	ENST00000396868.7	3082	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.3808490795718	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGCCTATTGGTCTTTT	-3235348	False	NA	-8	True	NA	NA	NA	3235360	3222324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3224614_3232420_3232545_3232832_3232922_3233505_3233837_3235111
transcript_51757.known	chr16	+	629	4	FSM	ENSG00000262668.2	ENST00000576468.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.69967317119759	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATAAATCTTTCCATCTA	3188131	True	NA	NA	False	NA	NA	NA	3188211	3224779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3188480_3189748_3189799_3191237_3191338_3224568
transcript_5176.known	chr1	-	415	3	FSM	ENSG00000126106.14	ENST00000420706.1	415	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	55	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCATGCTGCGCCTGTTGC	-44674369	False	NA	NA	False	GGGGCT	-36	NA	44674402	44654895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44655117_44660173_44660296_44674330
transcript_51761.known	chr16	+	2859	7	FSM	ENSG00000162086.16	ENST00000669516.2	2859	7	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	16.0043396892496	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTAAGTGTTGGGCGAGGAT	3303625	True	NA	NA	False	AATAAA	-17	NA	3305496	3318851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3313048_3313176_3316911_3317023_3317189
transcript_51764.known	chr16	+	2546	6	FSM	ENSG00000162086.16	ENST00000498240.6	2546	6	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_4	23.6474100061719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTGCCTTGCAATGTC	NA	False	NA	3	True	AATAAA	-17	NA	3305405	3318574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3308312_3308837_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_51766.known	chr16	+	598	5	FSM	ENSG00000162086.16	ENST00000571101.5	598	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	30.019785142469	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCATCAGCAGGCGTCATA	3303636	True	NA	NA	False	NA	NA	NA	3305507	3317252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3305644_3311752_3311949_3312676_3312769_3316911_3317023_3317189
transcript_51768.nic	chr16	+	1312	3	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	63	6209	-3	0	5prime_fragment	FALSE	canonical	3	33	junction_2	21	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGAGTCCCTGAGTACT	3303597	True	NA	14	True	AATAAA	-28	NA	3305468	3312365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3305644_3308312_3308837_3311752
transcript_51770.known	chr16	-	731	3	FSM	ENSG00000140993.11	ENST00000573695.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAAATTTAGGAAAACAAAT	-3304617	True	NA	NA	False	TATAAA	-19	NA	3305430	3301678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3302010_3304763_3304945_3305211
transcript_51772.nic	chr16	+	1328	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	63	9109	-3	-7	5prime_fragment	FALSE	canonical	3	75	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	CAAAAAAAACAAAAAAAAAA	3303597	True	NA	NA	False	NA	NA	NA	3305468	3309465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3305644_3308312
transcript_51773.nic	chr16	+	1804	2	ISM	ENSG00000162086.16	ENST00000498240.6	2546	6	63	8633	-3	469	5prime_fragment	FALSE	canonical	3	75	junction_1	0	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATAAGCCAGGCTGATG	3303597	True	NA	NA	False	NA	NA	NA	3305468	3309941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3305644_3308312
transcript_51774.known	chr16	-	3421	2	FSM	ENSG00000140993.11	ENST00000396862.2	3421	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATTTGTGTTTCATAA	-3304617	True	NA	0	True	TATAAA	-44	NA	3305430	3298807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3302010_3305211
transcript_5178.known	chr1	-	2236	3	FSM	ENSG00000126106.14	ENST00000372237.8	2236	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673284	True	NA	NA	False	AATAAA	-17	NA	44674481	44653246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44655210_44660173_44660296_44674330
transcript_51782.known	chr16	-	1746	3	FSM	ENSG00000140987.21	ENST00000439568.2	1746	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCTCCTTTCCTGGAA	-3399454	True	NA	NA	False	NA	NA	NA	3400994	3382498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3383712_3384458_3384942_3400944
transcript_51783.known	chr16	-	668	2	FSM	ENSG00000140987.21	ENST00000573830.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGAGTTAAAGGTTATTC	-3399449	True	NA	NA	False	NA	NA	NA	3400989	3384318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3384942_3400944
transcript_51784.known	chr16	-	3108	7	FSM	ENSG00000140987.21	ENST00000396852.9	3108	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	6.82316316348624	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399464	True	NA	-4	True	AATAAA	-17	NA	3401004	3382084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3383712_3384458_3384942_3390009_3390134_3390422_3390518_3393648_3393815_3397191_3397745_3400944
transcript_51785.known	chr16	-	3027	6	FSM	ENSG00000140987.21	ENST00000304926.7	3027	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	23.3632189562997	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTGGCCTTTGGTTGT	-3399485	True	NA	-4	True	AATAAA	-17	NA	3401025	3382084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3383712_3384458_3384942_3390009_3390184_3390422_3390518_3397191_3397788_3400973
transcript_51786.known	chr16	+	1068	4	FSM	ENSG00000103343.13	ENST00000575752.5	1068	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	33.9934634239519	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCTTTGTCCTCCTCTGTG	3399105	True	NA	10	True	AATAAA	-19	NA	3401234	3405043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3404908
transcript_51788.known	chr16	+	1586	4	FSM	ENSG00000103343.13	ENST00000571936.5	1586	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	33.4165627596057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTACTTGCATGTAAATCA	3399105	True	NA	NA	False	NA	NA	NA	3401234	3408973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3401271_3401732_3402407_3404425_3404649_3408320
transcript_51790.known	chr16	-	5483	4	FSM	ENSG00000167981.7	ENST00000301744.7	5483	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	4.32049379893857	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGTGAACTTTTTAAAAA	-3443188	True	NA	NA	False	ATTAAA	-23	NA	3443504	3432413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3437539_3440806_3440934_3443120_3443207_3443359
transcript_51792.known	chr16	+	1643	13	FSM	ENSG00000103351.13	ENST00000341633.9	1643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	33.0235606129254	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAATAAGAGCTGACGCC	3500280	True	NA	104	True	NA	NA	NA	3501011	3536559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3533098_3533156_3536121
transcript_51793.known	chr16	+	4083	12	FSM	ENSG00000103351.13	ENST00000576634.6	4083	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	12.5362284915914	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTATTGGTAGTAGTTAT	3500272	True	NA	NA	False	AATACA	-23	NA	3501003	3539048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507_3515592_3519902_3520037_3523157_3523300_3526411_3526485_3530567_3530676_3532785_3532842_3536121
transcript_51812.known	chr16	+	1950	7	FSM	ENSG00000122390.19	ENST00000572169.6	1950	7	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_2	121.314558987049	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCCCTGGCACAGGCGGT	3442956	True	NA	NA	False	NA	NA	NA	3443705	3485878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_51815.known	chr16	+	1149	7	FSM	ENSG00000122390.19	ENST00000424546.6	1149	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	121.243098314456	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCCTGCCCTCACT	3442932	True	NA	NA	False	NA	NA	NA	3443681	3485574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470_3448541_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_51817.known	chr16	+	2531	7	FSM	ENSG00000122390.19	ENST00000575076.5	2531	7	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	53.8072692321606	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454105	True	NA	19	True	AATAAA	-15	NA	3458077	3486952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_51818.known	chr16	+	2619	7	FSM	ENSG00000122390.19	ENST00000414063.6	2619	7	0	0	0	0	multi-exon	FALSE	canonical	2	90	junction_6	79.6061485620859	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454039	True	NA	19	True	AATAAA	-15	NA	3458011	3486952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_51820.known	chr16	+	2931	6	FSM	ENSG00000122390.19	ENST00000572584.2	2931	6	0	0	0	0	multi-exon	FALSE	canonical	2	169	junction_5	51.8204592800952	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTCTCATTACGAGCAAA	3454072	True	NA	-19	True	NA	NA	NA	3458044	3486914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698
transcript_51823.known	chr16	+	1045	6	FSM	ENSG00000122390.19	ENST00000421765.7	1045	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	117.690101537895	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCTGCCCTCACTGGGC	NA	False	NA	NA	False	NA	NA	NA	3457984	3485578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484690_3485084_3485466
transcript_51824.known	chr16	+	833	6	FSM	ENSG00000122390.19	ENST00000570819.5	833	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	103.698408859538	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCGCTGCCTGTTCTTG	3454157	True	NA	NA	False	NA	NA	NA	3458129	3485604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3484761_3485062_3485466
transcript_51826.known	chr16	+	2522	6	FSM	ENSG00000122390.19	ENST00000360862.9	2522	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	114.468161512274	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCGTCACATCCTGTTTC	3454020	True	NA	19	True	AATAAA	-15	NA	3457992	3486952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485084_3485466
transcript_51827.nic	chr16	+	616	6	ISM	ENSG00000103351.13	ENST00000341633.9	1643	13	-8	20995	0	13	5prime_fragment	FALSE	canonical	3	61	junction_1	7.46726188103779	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAGAATTGCAATAAAAGA	3500272	True	NA	NA	False	AATAAA	-17	NA	3501003	3515564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3501090_3504719_3504832_3506330_3506416_3508288_3508469_3512382_3512479_3515507
transcript_51828.known	chr16	+	561	5	FSM	ENSG00000122390.19	ENST00000571107.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	118.691564569686	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGTATTCACTGCTCACGA	3454078	True	NA	NA	False	NA	NA	NA	3458050	3482911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3482824
transcript_51829.known	chr16	+	3899	5	FSM	ENSG00000122390.19	ENST00000648681.1	3899	5	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	25.7972866790289	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCCCCACCCTGCCCCAC	3454132	True	NA	-92	True	NA	NA	NA	3458104	3486841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_51833.nic	chr16	+	535	4	NIC	ENSG00000122390.19	novel	818	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCTTCAGAACCATGA	3442918	True	NA	NA	False	NA	NA	NA	3443667	3450145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_3443828_3447481_3447621_3448470_3448541_3449979
transcript_51834.nic	chr16	+	589	4	NIC	ENSG00000122390.19	novel	326	3	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	2.35702260395516	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	3443609	3450165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_3443828_3447481_3447621_3448470_3448541_3450003
transcript_51837.known	chr16	+	1719	3	FSM	ENSG00000122390.19	ENST00000573201.6	1719	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTAAACCTCTTTTTTT	3442973	True	NA	NA	False	NA	NA	NA	3443722	3449945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3447481_3447621_3448470
transcript_5184.known	chr1	-	2075	2	FSM	ENSG00000126106.14	ENST00000476724.1	2075	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673245	True	NA	NA	False	AATAAA	-17	NA	44674442	44653246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44655210_44674330
transcript_51840.nic	chr16	+	453	3	NIC	ENSG00000122390.19	novel	328	3	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	9.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCTTCAGAACCATGA	NA	False	NA	NA	False	NA	NA	NA	3443610	3450145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_3443828_3448470_3448541_3449979
transcript_51841.known	chr16	+	326	3	FSM	ENSG00000122390.19	ENST00000615865.1	326	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442984	True	NA	NA	False	AATAAA	-17	NA	3443733	3450165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470_3448541_3450003
transcript_51842.known	chr16	+	328	3	FSM	ENSG00000122390.19	ENST00000575042.1	328	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAACCCTTCAGAACCATGA	3442996	True	NA	NA	False	NA	NA	NA	3443745	3450145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443838_3448470_3448541_3449979
transcript_51843.nic	chr16	+	447	3	NIC	ENSG00000122390.19	novel	326	3	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_2	1.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	NA	False	NA	NA	False	AATAAA	-17	NA	3443622	3450165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_3443838_3448470_3448541_3450003
transcript_51845.nic	chr16	+	475	3	NIC	ENSG00000122390.19	novel	326	3	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	6.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGGGATAATTCACTGTCC	3442901	True	NA	NA	False	AATAAA	-17	NA	3443650	3450165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_3443894_3448470_3448541_3450003
transcript_51849.known	chr16	+	537	2	FSM	ENSG00000122390.19	ENST00000574762.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGGAAGCAGTATCAT	3443038	False	NA	NA	False	NA	NA	NA	3443787	3448967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3448470
transcript_5185.nnic	chr1	-	821	2	NIC	ENSG00000126106.14	novel	890	3	NA	NA	-52	-37	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCAATCTGTCGGGCACT	-44674500	False	NA	-30	True	AATAAA	-21	NA	44674533	44654501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_44655120_44674330
transcript_51850.nic	chr16	+	394	2	ISM	ENSG00000122390.19	ENST00000575042.1	328	3	-123	1496	-26	53	5prime_fragment	FALSE	canonical	3	17	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAGTACTGAATGATAG	NA	False	NA	NA	False	ATTAAA	-12	NA	3443622	3448649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_3443838_3448470
transcript_51851.known	chr16	+	753	3	FSM	ENSG00000122390.19	ENST00000571696.6	753	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGTGAAGCACCTGTGTGG	3454103	True	NA	NA	False	NA	NA	NA	3458075	3476299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3458182_3467676_3468246_3476221
transcript_51852.known	chr16	+	2656	8	FSM	ENSG00000122390.19	ENST00000407558.9	2656	8	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	114.607938607396	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCGTCACATCCTGTTTCC	3442930	True	NA	20	True	AATAAA	-16	NA	3443679	3486953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443838_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362_3483598_3484698_3485062_3485466
transcript_51853.known	chr16	+	818	7	FSM	ENSG00000122390.19	ENST00000572757.5	818	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	141.56790675228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCAACAACACAGCAATAAAC	3442899	True	NA	-12	True	NA	NA	NA	3443648	3483449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3443828_3447481_3447621_3448470_3448541_3476221_3476338_3479470_3479601_3482501_3482599_3483362
transcript_51854.known	chr16	-	7315	15	FSM	ENSG00000188827.11	ENST00000294008.4	7315	15	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_14	8.1928291193941	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCCACACTCCAGG	-3610356	True	NA	-14	True	AATAAA	-21	NA	3611606	3581180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3582694_3583096_3583511_3584768_3584872_3589001_3591311_3592698_3592866_3594452_3594600_3595604_3595694_3596152_3596394_3597378_3597696_3597796_3598000_3600978_3601192_3602117_3602308_3606473_3606699_3608429_3609567_3611559
transcript_51859.known	chr16	+	8552	10	FSM	ENSG00000213918.11	ENST00000407479.5	8552	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	14.0554457615387	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCGTTTTTCAGC	NA	False	NA	NA	False	AATAAA	-26	NA	3642937	3665472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_3643037_3654960_3655045_3655372_3655521_3655848_3655938_3656101_3656186_3656637_3656754_3656998_3657112_3657186_3657342_3657719_3657817_3657905
transcript_51860.known	chr16	-	2223	18	FSM	ENSG00000126602.11	ENST00000246957.10	2223	18	0	0	0	0	multi-exon	FALSE	canonical	3	1682	junction_11	127.485123631759	303	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTTGGGCTTTTTTT	-3692692	True	NA	-2	True	TTTAAA	-18	NA	3717524	3658036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_3658231_3658792_3658866_3661986_3662133_3662881_3662968_3663423_3663563_3664273_3664460_3665970_3666119_3671721_3671792_3672699_3672821_3674338_3674495_3675323_3675398_3676035_3676146_3677497_3677659_3679718_3679791_3685995_3686137_3689054_3689138_3690826_3690986_3717420
transcript_51861.nnic	chr16	-	1112	3	FSM	ENSG00000262468.7	ENST00000687438.1	1114	3	2	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGCTTCTGGGGACCT	-4253658	True	NA	1	True	AATAAA	-22	NA	4253814	4246005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4246861_4246972_4247062_4253646
transcript_51862.known	chr16	-	376	3	FSM	ENSG00000262468.7	ENST00000648010.2	1074	3	74	624	3	-70	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTTGCTGAAATGGCTGG	-4253716	False	NA	NA	False	AAAAAG	-39	NA	4253738	4246635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4246861_4246972_4247062_4253676
transcript_51864.known	chr16	-	2163	7	FSM	ENSG00000090447.12	ENST00000204517.11	2163	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	7.03364928200306	71	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGAGTCTCCTGGGTG	-4270299	True	NA	-4	True	AATAAA	-20	NA	4273023	4257185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4258250_4260089_4260246_4260454_4260596_4261778_4261950_4262323_4262423_4262535_4262702_4272657
transcript_51867.known	chr16	-	3284	31	FSM	ENSG00000103426.12	ENST00000572467.5	3284	31	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	172.959481446442	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4415710	True	NA	-6	True	AATAAA	-14	NA	4416587	4340250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_51868.known	chr16	-	3472	28	FSM	ENSG00000262246.6	ENST00000251166.9	3472	28	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_19	16.8420402857746	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGCTGCTGTGGTC	-4415719	True	NA	-1	True	ATTAAA	-18	NA	4416596	4354541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4355164_4355285_4355373_4357167_4357260_4357967_4358104_4358366_4358484_4359295_4359386_4359479_4359622_4360277_4360364_4360443_4360549_4360942_4361086_4361161_4361249_4361360_4361470_4361984_4362161_4362611_4362739_4364275_4364414_4364596_4364690_4364774_4364921_4365002_4365061_4365490_4365546_4387985_4388069_4388544_4388632_4395288_4395340_4405490_4405568_4407500_4407685_4408180_4408252_4412355_4412431_4413307_4413405_4416458
transcript_5187.known	chr1	-	2017	2	FSM	ENSG00000126106.14	ENST00000468117.1	2017	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACCGTGGTGATCACGGG	-44673280	True	NA	NA	False	AATAAA	-17	NA	44674477	44653246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44655117_44674330
transcript_51884.known	chr16	-	674	6	FSM	ENSG00000217930.8	ENST00000571941.5	674	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	334.193117822615	1114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4341849	False	NA	-6	True	AATAAA	-14	NA	4345904	4340250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4343482_4343595_4345785
transcript_5190.known	chr1	-	117	1	FSM	ENSG00000199377.1	ENST00000362507.1	117	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTTCTGTTACTAAAGA	-44720493	False	1409	47	True	NA	NA	NA	44721902	44721785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44721800_44721900
transcript_5191.known	chr1	-	116	1	FSM	ENSG00000200169.1	ENST00000363299.1	116	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAACGGTGTTTAAAAAT	-44729761	True	NA	NA	False	NA	NA	NA	44731170	44731054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44731100_44731200
transcript_51924.known	chr16	-	340	4	FSM	ENSG00000262686.1	ENST00000576080.1	340	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGTGCTGAATGAATCGTCG	NA	False	NA	NA	False	AATAAA	-1	NA	4328340	4324666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4324776_4325269_4325355_4326429_4326495_4328259
transcript_51925.known	chr16	-	353	4	FSM	ENSG00000217930.8	ENST00000571178.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	345.309844761033	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGGCTCCCCCCGCCCA	-4342245	True	NA	-73	True	AAAAAG	-22	NA	4351293	4340317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4351231
transcript_5193.known	chr1	+	2862	21	FSM	ENSG00000142945.13	ENST00000372224.9	2862	21	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_3	56.9706942208009	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTGGGATGTGTCTGAG	44735394	True	NA	29	True	AATAAA	-37	NA	44739836	44767767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753131_44753255_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907_44757972_44758048_44758141_44759205_44759349_44760279_44760485_44760591_44760703_44761915_44761984_44762345_44762452_44762544_44762659_44766825_44766950_44767096
transcript_51932.known	chr16	-	806	2	FSM	ENSG00000217930.8	ENST00000575942.1	806	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGCACCGTGCCTG	-4342272	True	NA	NA	False	ATTAAA	-18	NA	4351320	4345289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4346007_4351231
transcript_51933.known	chr16	-	475	2	FSM	ENSG00000217930.8	ENST00000575884.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTTTGGCACCGTGCCTG	-4341923	False	NA	NA	False	ATTAAA	-18	NA	4345978	4345289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4345572_4345785
transcript_51935.known	chr16	-	650	5	FSM	ENSG00000217930.8	ENST00000573614.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	281.665138062913	861	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342222	True	NA	-6	True	AATAAA	-14	NA	4351270	4340250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341673_4343206_4343292_4351231
transcript_51936.known	chr16	-	704	4	FSM	ENSG00000217930.8	ENST00000573236.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_3	47.3168985552613	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGTTTGCATGTGTCCAG	-4334502	False	NA	-4	True	AATAAA	-16	NA	4343550	4340248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206
transcript_51937.known	chr16	-	533	5	FSM	ENSG00000217930.8	ENST00000318059.8	533	5	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_4	112.247494404107	10564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342273	True	NA	-6	True	AATAAA	-14	NA	4351321	4340250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341505_4343206_4343292_4351231
transcript_51938.known	chr16	-	606	5	FSM	ENSG00000217930.8	ENST00000571986.5	606	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	298.033869719534	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCGTTTGCATGTGTCC	-4342267	True	NA	-6	True	AATAAA	-14	NA	4351315	4340250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4340406_4340919_4340986_4341367_4341584_4343206_4343292_4351231
transcript_51944.known	chr16	+	2700	12	FSM	ENSG00000103423.14	ENST00000262375.11	2700	12	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_11	175.315206093491	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425867	4456775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4454810_4454928_4455545
transcript_51948.nnic	chr16	+	2184	12	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	1	-70	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	165.071584772103	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGGAATGTAAAATGATT	NA	False	NA	13	True	AATAAA	-19	NA	4425805	4456702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545_4456155_4456542
transcript_51949.nnic	chr16	+	2257	12	NNC	ENSG00000103423.14	novel	2700	12	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	165.071584772103	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425805	4456775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545_4456155_4456542
transcript_51951.known	chr16	+	2591	11	FSM	ENSG00000103423.14	ENST00000355296.8	2591	11	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	54.0522894982257	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGTCATTTCTTCTTTG	NA	False	NA	17	True	AAAAAG	-17	NA	4425859	4456775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4426093_4434383_4434518_4437401_4437486_4441374_4441576_4442267_4442421_4443016_4443165_4444663_4444729_4446885_4447015_4448732_4448849_4450399_4450498_4455545
transcript_51960.known	chr16	+	403	3	FSM	ENSG00000103423.14	ENST00000573120.5	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	62.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAAAAAAAAGAGAT	4426003	True	NA	NA	False	NA	NA	NA	4426047	4437625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4426093_4434383_4434518_4437401
transcript_51967.known	chr16	+	1797	7	FSM	ENSG00000103415.12	ENST00000458134.7	1797	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	218.97260102579	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCGCTGTGTAAATGCT	4476327	False	NA	-39	True	NA	NA	NA	4476339	4510295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476488_4483636_4483755_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51975.known	chr16	+	1727	6	FSM	ENSG00000103415.12	ENST00000406590.6	1727	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	193.229811364603	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTCCTTCCCTGCCTCCTG	NA	False	NA	12	True	AATAAA	-17	NA	4474702	4510346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4474848_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51977.known	chr16	+	1027	5	FSM	ENSG00000103415.12	ENST00000575120.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	211.391816303281	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCAGGTGACTTTTTAAA	4475866	True	NA	-60	True	ACTAAA	-6	NA	4476405	4509836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476488_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51980.known	chr16	-	1240	6	FSM	ENSG00000153406.14	ENST00000574425.5	1240	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	160.327913976325	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGGCTTCCAGGAGAAGA	-4471965	True	NA	-22	True	AATAAA	-15	NA	4474643	4461694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474422
transcript_51981.known	chr16	-	1092	6	FSM	ENSG00000153406.14	ENST00000283429.11	1092	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	137.31860762475	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGCTTCCAGGAGAAGAG	-4471947	True	NA	-21	True	AATAAA	-16	NA	4474625	4461693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4461960_4463659_4463851_4466152_4466403_4469226_4469466_4474092_4474167_4474553
transcript_51982.known	chr16	+	1673	6	FSM	ENSG00000103415.12	ENST00000570646.6	1673	6	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	51.6975821484912	596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTTCCCTGCCTCCTGG	4475858	True	NA	13	True	AATAAA	-18	NA	4476397	4510347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4476488_4505483_4505611_4506894_4507013_4507712_4508205_4509411_4509539_4509628
transcript_51985.known	chr16	-	2774	6	FSM	ENSG00000089486.17	ENST00000563332.6	2774	6	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_5	50.8999017680781	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAATATGTGCTTTTTTA	-4533185	True	NA	20	True	AATGAA	-10	NA	4538470	4510674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538324
transcript_51986.known	chr16	-	2706	6	FSM	ENSG00000089486.17	ENST00000567695.6	2706	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	192.394802424598	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGCTTTTTTAAAACCC	-4537551	True	NA	26	True	AATACA	-3	NA	4538773	4510668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4512684_4512790_4513065_4513695_4513852_4514045_4514145_4514574_4514665_4538701
transcript_51993.known	chr16	-	799	3	FSM	ENSG00000153443.13	ENST00000587615.1	799	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	138	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTTCCTTCGAAGACG	-4609799	True	NA	NA	False	NA	NA	NA	4614872	4609367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4609909_4610492_4610556_4614677
transcript_51994.known	chr16	-	1374	3	FSM	ENSG00000153443.13	ENST00000283474.12	1374	3	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	3	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGGCTCTGTGGTCTT	-4609815	True	NA	-5	True	NA	NA	NA	4614888	4608883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4609984_4610492_4610556_4614677
transcript_51995.known	chr16	-	1275	3	FSM	ENSG00000153443.13	ENST00000591897.5	1275	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	137.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGCTCTGTGGTCTTA	-4614386	True	NA	-4	True	NA	NA	NA	4615027	4608882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4609984_4610492_4610556_4614916
transcript_51996.known	chr16	-	281	2	FSM	ENSG00000153443.13	ENST00000588691.1	281	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCAGGCTCTGTGGTCTT	-4609803	True	NA	-5	True	NA	NA	NA	4614876	4608883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4609053_4614764
transcript_51998.known	chr16	+	709	3	FSM	ENSG00000168101.14	ENST00000590460.1	709	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	213	945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCATCCTGTCATCATCTCC	4688117	False	NA	NA	False	NA	NA	NA	4693760	4695292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4693880_4693983_4694239_4694957
transcript_52.known	ERCC-00108	+	1005	1	FSM	ERCC-00108A	DQ668365	1005	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2457	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00108_+_0_1000
transcript_52001.nic	chr16	-	2291	16	NIC	ENSG00000168096.15	novel	2302	17	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_14	33.3235985785182	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGGGCTCAGTTCTGGT	-4734243	False	NA	-3	True	AATAAA	-16	NA	4734275	4696510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4726658_4726781_4729979_4730152_4734155
transcript_52004.known	chr16	-	2272	15	FSM	ENSG00000168096.15	ENST00000450067.6	2272	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	38.6937214756174	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCTCAGTTCTGGTC	NA	False	NA	-2	True	AATAAA	-17	NA	4734377	4696509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4696897_4697016_4697105_4697332_4697417_4697976_4698063_4698426_4698600_4698799_4698942_4699051_4699177_4700969_4701135_4701433_4701544_4702101_4702243_4705094_4705254_4714050_4714187_4724749_4724832_4729979_4730152_4734155
transcript_52016.known	chr16	-	834	2	FSM	ENSG00000168096.15	ENST00000590689.1	834	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGATCCCTGGCCTTC	-4731927	True	NA	NA	False	AAAAAG	-7	NA	4734195	4729357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4730152_4734155
transcript_52018.nic	chr16	-	538	2	ISM	ENSG00000168096.15	ENST00000304283.9	2772	18	112	34753	1	-1906	5prime_fragment	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGTGTTCAGTTCTGTG	-4734127	False	NA	NA	False	AATAAA	-26	NA	4734159	4731263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4731580_4733937
transcript_52019.nic	chr16	-	422	2	ISM	ENSG00000168096.15	ENST00000589065.5	561	6	-18	26025	-1	-1910	5prime_fragment	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTTTGGTGTTCAGTTC	-4731997	True	NA	NA	False	AATAAA	-22	NA	4734265	4731267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4731580_4734155
transcript_52025.known	chr16	+	394	4	FSM	ENSG00000267795.6	ENST00000588606.5	394	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.39934634239519	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGTCTGCAGTGTCTT	4795324	True	NA	NA	False	NA	NA	NA	4795377	4796281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4795450_4795714_4795859_4795947_4796034_4796189
transcript_52026.known	chr16	+	628	4	FSM	ENSG00000267795.6	ENST00000586005.6	628	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.55902608401044	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGATCACGAGGTCAGGAGA	4795315	True	NA	NA	False	NA	NA	NA	4795368	4796491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4795450_4795714_4795859_4795947_4796049_4796189
transcript_52031.known	chr16	+	355	3	FSM	ENSG00000267795.6	ENST00000591870.1	355	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	3	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCCTGAGTCTGCAGTGTC	4795626	False	NA	NA	False	NA	NA	NA	4795679	4796279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_4795859_4795947_4796034_4796189
transcript_52032.known	chr16	-	1362	10	FSM	ENSG00000067836.13	ENST00000587843.5	1362	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	92.4675451906248	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTGGAGCCCCTGTCTGTC	-4800017	True	NA	-8	True	AATAAA	-15	NA	4802633	4796968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801502_4801586_4802381_4802454_4802526
transcript_52033.known	chr16	-	1418	11	FSM	ENSG00000067836.13	ENST00000322048.12	1418	11	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_7	19.2429207762231	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGAGCCCCTGTCTGTCT	-4800017	True	NA	-7	True	AATAAA	-16	NA	4802633	4796967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4797502_4797713_4797841_4797937_4797988_4798070_4798185_4798568_4798668_4799685_4799782_4800497_4800579_4801266_4801322_4801502_4801586_4802381_4802454_4802526
transcript_52035.nic	chr16	-	3411	17	NIC	ENSG00000140632.17	novel	3527	18	NA	NA	-66	0	combination_of_known_junctions	FALSE	canonical	3	254	junction_1	145.988106857203	874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832935	False	NA	-1	True	AATAAA	-19	NA	4847354	4803202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_52038.known	chr16	-	1831	16	FSM	ENSG00000140632.17	ENST00000591451.5	1831	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	175.970022699575	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAGTGTCAGCAGGATTGG	-4832846	True	NA	NA	False	NA	NA	NA	4847265	4805048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814630_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_52039.known	chr16	-	3466	15	FSM	ENSG00000140632.17	ENST00000436648.9	3466	15	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_11	202.317151007612	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832860	True	NA	-1	True	AATAAA	-19	NA	4847279	4803202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_52044.nic	chr16	-	1071	9	ISM	ENSG00000140632.17	ENST00000591451.5	1831	16	-89	16155	-66	0	5prime_fragment	FALSE	canonical	3	627	junction_1	86.313020454622	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGTGGTCGGGTCTCCCTT	-4832935	False	NA	3	True	GATAAA	-25	NA	4847354	4821203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4845073_4845154_4846173_4846211_4847227
transcript_52061.nnic	chr16	-	681	4	NNC	ENSG00000140632.17	novel	3606	14	NA	NA	-66	-6378	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	377.537930397581	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCGGCTTGTTCTCACC	-4832935	False	NA	-1	True	AATAAA	-15	NA	4847354	4839242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_4839680_4845073_4845154_4846173_4846211_4847227
transcript_52062.nic	chr16	-	535	4	ISM	ENSG00000140632.17	ENST00000588732.5	3527	18	-83	40109	-66	-10447	5prime_fragment	FALSE	canonical	3	12	junction_1	375.665039925493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGCGTCTACCTGTAA	-4832935	False	NA	NA	False	AATACA	-15	NA	4847354	4843311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4843603_4845073_4845154_4846173_4846211_4847227
transcript_52064.nic	chr16	-	950	3	ISM	ENSG00000140632.17	ENST00000587875.1	630	4	-72	11913	-66	-11503	5prime_fragment	FALSE	canonical	3	750	junction_2	53.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTCATGTGTAAAACTAA	-4832935	False	NA	NA	False	AATAAA	-18	NA	4847354	4844367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_4845154_4846173_4846211_4847227
transcript_52066.known	chr16	-	3527	18	FSM	ENSG00000140632.17	ENST00000588732.5	3527	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_14	269.145385905695	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGCCGCAGGAGTCCTG	-4832852	True	NA	-1	True	AATAAA	-19	NA	4847271	4803202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_4804149_4804521_4805311_4811169_4811295_4811622_4811803_4812085_4812249_4813736_4813839_4814536_4814648_4817597_4817698_4821379_4821454_4821546_4821598_4822874_4822932_4823820_4823908_4831978_4832222_4832773_4832913_4843403_4843603_4845073_4845154_4846173_4846211_4847227
transcript_52068.known	chr16	+	3900	13	FSM	ENSG00000033011.14	ENST00000262374.10	3900	13	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_11	15.4189187544249	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCGCTATGTTGCTCAAG	5068508	True	NA	23	True	GATAAA	-18	NA	5071842	5087379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_52072.known	chr16	+	1984	13	FSM	ENSG00000033011.14	ENST00000684008.1	1984	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109.71335758846	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	5068515	True	NA	-37	True	NA	NA	NA	5071849	5085532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5071992_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079107_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_52073.known	chr16	+	1689	13	FSM	ENSG00000033011.14	ENST00000591822.5	1689	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3999733546454	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAATTGGTTCTGTGAC	5068514	True	NA	-17	True	NA	NA	NA	5071848	5085018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072214_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_52078.known	chr16	+	3053	12	FSM	ENSG00000033011.14	ENST00000683772.1	3053	12	0	0	0	0	multi-exon	TRUE	canonical	3	273	junction_6	13.5610038878499	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCAGTTTGTGGTTCCTG	5068471	True	NA	-82	True	NA	NA	NA	5071805	5085487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5083758_5084749
transcript_52079.known	chr16	+	1952	12	FSM	ENSG00000033011.14	ENST00000684335.1	1952	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	86.0082640657472	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATTTGGAAATTAACATTC	5068471	True	NA	-64	True	NA	NA	NA	5071805	5085505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5082558_5082674_5083681_5083758_5084749
transcript_52082.known	chr16	+	2051	12	FSM	ENSG00000033011.14	ENST00000684190.1	2051	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	86.4068791262049	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCCAGTCCAATGAAAGTT	5068471	True	NA	-37	True	NA	NA	NA	5071805	5085532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072058_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_52088.nic	chr16	-	1392	9	NIC	ENSG00000118894.15	novel	2397	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_8	85.6416042294865	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-5097369	True	NA	NA	False	NA	NA	NA	5097795	5085362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097279_5097354_5097643
transcript_52089.known	chr16	-	2397	8	FSM	ENSG00000118894.15	ENST00000427587.9	2397	8	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_5	49.6502050060507	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATCTGTGGCTACTTTC	-5097369	True	NA	NA	False	AATAAA	-37	NA	5097795	5084283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5093483_5093565_5095451_5095515_5097643
transcript_52091.known	chr16	-	1282	8	FSM	ENSG00000118894.15	ENST00000587161.5	1282	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	102.272545042097	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	-5097340	True	NA	NA	False	NA	NA	NA	5097766	5085362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097279_5097354_5097643
transcript_52099.nic	chr16	-	1266	7	NIC	ENSG00000118894.15	novel	1282	8	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_5	88.2510623165523	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAAAACGTGTGTATCA	NA	False	NA	NA	False	NA	NA	NA	5097824	5085362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5091793_5091896_5095451_5095515_5097643
transcript_52100.known	chr16	-	2268	7	FSM	ENSG00000118894.15	ENST00000458008.8	2268	7	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	69.7075239044458	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCACACCCCTTAATCTACA	-5097362	True	NA	NA	False	AATAAA	-17	NA	5097788	5084303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5093483_5093565_5095451_5095515_5097643
transcript_52109.known	chr16	-	873	6	FSM	ENSG00000118894.15	ENST00000587133.1	873	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	99.5035677752311	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATGGGAAAGCGGATAAA	-5097316	True	NA	NA	False	NA	NA	NA	5097742	5085571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_5085733_5089106_5089257_5090083_5090350_5090431_5090566_5095451_5095515_5097643
transcript_52114.nic	chr16	-	1925	5	ISM	ENSG00000153446.16	ENST00000472572.8	1360	8	6224	0	-1112	0	3prime_fragment	FALSE	canonical	2	8	junction_2	2.59807621135332	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGTTGAGTCTTGTTT	-5059709	True	NA	-35	True	AATAAA	-17	NA	5059732	5044121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_5044479_5047877_5047965_5055245_5055351_5056052_5056189_5058492
transcript_52124.known	chr16	+	1419	13	FSM	ENSG00000033011.14	ENST00000544428.1	1419	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83.3999733546454	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATTTCTTCTCTGGAGG	5068913	False	NA	22	True	NA	NA	NA	5072247	5085057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_5072304_5072950_5073029_5073152_5073257_5075387_5075537_5077444_5077535_5077906_5078018_5078756_5078879_5079063_5079103_5079747_5079808_5080945_5081057_5082558_5082674_5083681_5083758_5084749
transcript_52128.nnic	chr16	+	1129	2	NIC	ENSG00000267070.1	novel	531	4	NA	NA	34414	19636	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGACTCAGGGGGCATCAC	5133126	True	NA	NA	False	AATAAA	-13	NA	5133152	5162231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_5133380_5161329
transcript_5213.known	chr1	+	778	6	FSM	ENSG00000142937.12	ENST00000396651.8	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	8257	junction_1	1976.66988645044	112808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759486	True	NA	52	True	AATATA	-21	NA	44775539	44778779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776775_44777613_44777790_44777999_44778130_44778575
transcript_52131.known	chr16	-	945	4	FSM	ENSG00000232258.7	ENST00000620492.5	1618	4	673	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGCTTTACAGATTGC	-8589748	False	NA	0	True	AATAAA	-19	NA	8589838	8569499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8570006_8572086_8572225_8589212_8589294_8589618
transcript_52132.known	chr16	-	899	4	FSM	ENSG00000232258.7	ENST00000568335.3	899	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGCTTTACAGATTGC	-8590103	False	NA	0	True	AATAAA	-19	NA	8590193	8569499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8570006_8572086_8572225_8589212_8589294_8590019
transcript_52133.known	chr16	-	560	3	FSM	ENSG00000232258.7	ENST00000624696.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTTGGCCCCGGA	-8589748	False	NA	NA	False	NA	NA	NA	8589838	8569746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8570006_8589212_8589294_8589618
transcript_52137.known	chr16	+	1312	12	FSM	ENSG00000067365.15	ENST00000561758.5	1312	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	54.0266233727211	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGTAAAATCAGAAGCT	8618995	True	NA	-10	True	NA	NA	NA	8621728	8646191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8628877_8629044_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_5214.known	chr1	+	1124	11	FSM	ENSG00000142945.13	ENST00000452259.5	1124	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	144.440299085816	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTACTGTGTACTGCTG	44735375	True	NA	NA	False	NA	NA	NA	44739817	44757971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44740003_44740912_44741008_44747383_44747486_44747651_44747701_44750441_44750565_44753732_44753834_44754749_44754846_44755928_44755984_44756074_44756238_44757555_44757647_44757907
transcript_52149.known	chr16	+	4974	11	FSM	ENSG00000067365.15	ENST00000381920.8	4974	11	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_10	25.3355481487968	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGCGTGGTGGCGG	8618964	True	NA	NA	False	AATACA	-17	NA	8621697	8649654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_5215.known	chr1	+	685	6	FSM	ENSG00000142937.12	ENST00000372209.3	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_3	4948.02006463191	2559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44759519	True	NA	52	True	AATATA	-21	NA	44775572	44778779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44775601_44776033_44776141_44776674_44776715_44777613_44777790_44777999_44778130_44778575
transcript_5216.known	chr1	+	898	3	FSM	ENSG00000142937.12	ENST00000464658.1	898	3	0	0	0	0	multi-exon	FALSE	canonical	3	12837	junction_1	144	1652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTTGCCCTGCAAAACT	44775449	False	NA	52	True	AATATA	-21	NA	44777225	44778779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44777790_44777999_44778130_44778575
transcript_52160.nnic	chr16	+	1422	10	NNC	ENSG00000067365.15	novel	1510	10	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	58.5607208347998	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618954	True	NA	17	True	AGTAAA	-18	NA	8621687	8646218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_8621776_8625495_8625799_8628729_8629026_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_52162.nnic	chr16	+	1375	10	NIC	ENSG00000067365.15	novel	4974	11	NA	NA	1	0	intron_retention	FALSE	canonical	3	34	junction_9	50.1526066183731	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618958	True	NA	17	True	AGTAAA	-18	NA	8621691	8646218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635038_8635080_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_52165.known	chr16	+	1510	10	FSM	ENSG00000067365.15	ENST00000163678.11	1510	10	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	41.5980175216127	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGAGATTTTGTCATTT	8618957	True	NA	23	True	AGTAAA	-24	NA	8621690	8646224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_52169.nnic	chr16	+	1395	9	NIC	ENSG00000067365.15	novel	1510	10	NA	NA	-52	0	intron_retention	FALSE	canonical	3	34	junction_8	61.8546683767685	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618897	True	NA	17	True	AGTAAA	-18	NA	8621630	8646218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8635167_8635313_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8646107
transcript_5217.known	chr1	+	391	2	FSM	ENSG00000142937.12	ENST00000474582.1	391	2	0	0	0	0	multi-exon	FALSE	canonical	3	13125	junction_1	0	3117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATGTTGCCTGAATATA	44776309	False	NA	12	True	AATAAA	-24	NA	44777902	44778739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44778130_44778575
transcript_52170.nnic	chr16	+	1363	9	NIC	ENSG00000067365.15	novel	1510	10	NA	NA	4	0	intron_retention	FALSE	canonical	1	1	junction_3	63.2553110418406	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACATGCTTGAGATTTTG	8618953	True	NA	17	True	AGTAAA	-18	NA	8621686	8646218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8621776_8625495_8625799_8628729_8629111_8639090_8639163_8641130_8641185_8642126_8642208_8642462_8642566_8644556_8644726_8646107
transcript_5218.known	chr1	+	694	5	FSM	ENSG00000142937.12	ENST00000497035.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	5672.42282340624	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCTCCTGGAGGAGCAG	44775240	False	NA	45	True	AAAAAG	-14	NA	44775250	44778087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44775474_44776033_44776141_44776674_44776775_44777613_44777790_44777999
transcript_52180.nnic	chr16	+	1309	2	NIC	ENSG00000183044.12	novel	1870	2	NA	NA	-9	140	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATAATAGTATTTTATTAAT	8673792	True	NA	NA	False	AATAAA	-14	NA	8674586	8715773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_8674712_8714589
transcript_52181.known	chr16	+	1870	2	FSM	ENSG00000183044.12	ENST00000563992.1	1870	2	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAAAATAAATA	8673822	True	NA	NA	False	NA	NA	NA	8674616	8737473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8674712_8735698
transcript_52182.nnic	chr16	-	338	2	NNC	ENSG00000184857.8	novel	561	3	NA	NA	16194	623	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTTGTAATGTTCTCT	NA	False	NA	NA	False	AATAAA	-13	NA	8781445	8779760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_8779946_8781292
transcript_52184.known	chr16	+	1048	9	FSM	ENSG00000140650.13	ENST00000683435.1	1048	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	198.389728501755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTCCACCTCCAGTGCC	8791974	True	NA	NA	False	NA	NA	NA	8797809	8847965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8802080_8802146_8802260_8802390_8804766_8804844_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_52187.known	chr16	+	2285	8	FSM	ENSG00000140650.13	ENST00000268261.9	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.1556306634789	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTTTCTCATTCCGATT	8792003	True	NA	27	True	ATTAAA	-15	NA	8797838	8849325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_52188.known	chr16	+	567	7	FSM	ENSG00000140650.13	ENST00000564069.1	567	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	144.908016801464	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGACCATTTATTTCTT	8792076	False	NA	NA	False	NA	NA	NA	8797911	8813067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811641_8811714_8812990
transcript_52189.known	chr16	+	986	7	FSM	ENSG00000140650.13	ENST00000566604.5	986	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	143.787748666799	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTTCCCCATCATTCTAG	8792001	True	NA	NA	False	NA	NA	NA	8797836	8848124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_5219.known	chr1	-	385	1	FSM	ENSG00000234093.3	ENST00000594193.1	385	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGGGATGTAATACATAT	-44780439	False	NA	NA	False	AAAACA	-30	NA	44780715	44780330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44780300_44780700
transcript_52190.known	chr16	+	931	7	FSM	ENSG00000140650.13	ENST00000562318.5	931	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	144.391154699848	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTTCCCCACCCACCCCC	8792006	True	NA	NA	False	NA	NA	NA	8797841	8848051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_52194.known	chr16	+	1557	6	FSM	ENSG00000140650.13	ENST00000566540.5	1557	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	195.399488228603	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCCTATCTGCACTCAC	8792006	True	NA	NA	False	NA	NA	NA	8797841	8848777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8806315_8806408_8811637_8811714_8812990_8813107_8847723
transcript_52195.known	chr16	+	793	6	FSM	ENSG00000140650.13	ENST00000565221.5	793	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	146.030133876539	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGGAATGCCTCGCACAAA	8792031	True	NA	NA	False	NA	NA	NA	8797866	8848030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8811078_8811179_8811637_8811714_8812990_8813107_8847723
transcript_52196.known	chr16	+	1085	7	FSM	ENSG00000140650.13	ENST00000682008.1	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	35.3777236878425	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCAGTCCCCGGTGCCACT	8797699	True	NA	NA	False	ATTAAA	-29	NA	8797715	8813385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315_8806408_8811078_8811179_8811637_8811714_8812990
transcript_52198.known	chr16	+	1002	5	FSM	ENSG00000140650.13	ENST00000570076.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	177.504049249588	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACGAAGCTCCCGCCTGCA	8792014	True	NA	NA	False	NA	NA	NA	8797849	8848322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8811637_8811714_8812990_8813107_8847723
transcript_5220.nnic	chr1	-	678	2	NNC	ENSG00000142959.5	novel	2512	9	NA	NA	3874	1745	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTTGCATATATTTGA	-44784282	False	276	-2	True	AATAAA	-22	NA	44784296	44781839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_44782230_44784008
transcript_52200.known	chr16	-	556	5	FSM	ENSG00000153048.11	ENST00000565287.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1087.80613507187	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAGGCACCAAGCATGAG	-8838668	True	NA	NA	False	NA	NA	NA	8869006	8855213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8860104_8860219_8868965
transcript_52206.known	chr16	+	1036	4	FSM	ENSG00000140650.13	ENST00000564030.5	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_2	44.5745318414999	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGAGGCTGGAGTGCAGTGG	8791985	True	NA	NA	False	NA	NA	NA	8797820	8807034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8804766_8804844_8806315
transcript_5221.nnic	chr1	-	705	2	NNC	ENSG00000142959.5	novel	2512	9	NA	NA	3227	1745	intron_retention	FALSE	canonical	3	11	junction_1	0	51	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATCTTGCATATATTTGA	-44784929	False	NA	-2	True	AATAAA	-22	NA	44784943	44781839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_44782230_44784628
transcript_52216.known	chr16	-	3026	4	FSM	ENSG00000153048.11	ENST00000396593.6	3026	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	1037.13397827325	2707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGTGTTTGTGTGGAGG	-8868376	False	NA	-2	True	AATAAA	-22	NA	8868401	8852941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868048
transcript_5222.known	chr1	+	2340	15	FSM	ENSG00000173846.13	ENST00000372201.5	2340	15	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_11	8.58362227900153	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTCCCCCTCACTCGC	44799797	True	NA	7	True	AATAAA	-14	NA	44800376	44805990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_44800674_44800839_44800948_44801035_44801153_44801621_44801752_44801844_44801933_44802759_44802856_44802954_44803154_44803267_44803392_44803599_44803692_44803930_44804025_44804162_44804247_44804338_44804502_44804649_44804780_44805265_44805380_44805486
transcript_52223.known	chr16	+	531	3	FSM	ENSG00000140650.13	ENST00000566196.5	531	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	211.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTACCTCTGAGAGATT	8792003	True	NA	NA	False	NA	NA	NA	8797838	8802389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8802080
transcript_52224.known	chr16	+	583	3	FSM	ENSG00000140650.13	ENST00000562448.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	209	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCACTTAGTAAGGAATAATT	8792006	True	NA	NA	False	TTTAAA	-12	NA	8797841	8806679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8797949_8801798_8801911_8806315
transcript_5223.known	chr1	-	162	1	FSM	ENSG00000226499.1	ENST00000447970.1	162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	44844082	44843920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44843900_44844100
transcript_52232.known	chr16	-	1439	2	FSM	ENSG00000184857.8	ENST00000333050.7	1439	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGGTACGTTATTTTATA	-8796393	True	NA	1	True	AATAAA	-16	NA	8797639	8795179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8796591_8797611
transcript_52236.known	chr16	-	2709	4	FSM	ENSG00000153048.11	ENST00000311052.10	2709	4	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_3	374.904728638564	16119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTATGCGTGTGTTTGTGT	-8838668	True	NA	-7	True	AATAAA	-17	NA	8869006	8852946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8855327_8858349_8858473_8859170_8859336_8868965
transcript_52237.known	chr16	-	1913	2	FSM	ENSG00000153048.11	ENST00000563815.5	1913	2	0	0	0	0	multi-exon	FALSE	canonical	3	1448	junction_1	0	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCG	-8838668	True	NA	NA	False	AATACA	-10	NA	8869006	8857463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_8859336_8868965
transcript_52238.known	chr16	+	498	2	FSM	ENSG00000261481.1	ENST00000570290.1	498	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAAAATTTACTTGAGGCC	8869211	True	NA	NA	False	AATAAA	-14	NA	8869250	8870032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8869329_8869612
transcript_52242.known	chr16	+	427	2	FSM	ENSG00000260979.1	ENST00000564485.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTCCACATCTTTC	8962693	False	NA	NA	False	AATAAA	-22	NA	8962705	8966990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_8962895_8966752
transcript_52243.known	chr16	+	5952	4	FSM	ENSG00000182831.12	ENST00000327827.12	5952	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	12.0369800568452	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGTGACTTGTGTTCCT	9086495	True	NA	NA	False	AATAAA	-36	NA	9091643	9121635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_9092271_9092920_9093002_9102983_9103260_9116667
transcript_52247.known	chr16	-	480	1	FSM	ENSG00000220793.5	ENST00000484462.1	480	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAGGTGTTAAAAAAAAA	-9156870	False	NA	NA	False	NA	NA	NA	9156881	9156401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_9156400_9156900
transcript_5226.known	chr1	-	1457	10	FSM	ENSG00000070785.17	ENST00000372183.7	1457	10	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_4	22.4785219847143	397	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTCAAAAACTTTACTAGG	-44980773	True	NA	-5	True	AATAAA	-21	NA	44986587	44874526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_44874827_44875617_44875696_44879817_44880009_44881611_44881740_44897354_44897445_44926627_44926740_44941505_44941666_44978314_44978461_44981020_44981178_44986492
transcript_52267.nnic	chr16	-	1151	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	14.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674558	True	NA	NA	False	AATAAA	-22	NA	9676917	9666884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667360_9674300_9674733_9676673
transcript_52268.nnic	chr16	-	1197	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_2	6.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674566	True	NA	NA	False	AATAAA	-22	NA	9676925	9666884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667360_9674300_9674771_9676673
transcript_5227.nnic	chr1	+	632	5	Antisense	novelGene_ENSG00000268949.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	non_canonical	0	0	junction_2	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGCAGTCTTTTGCATT	NA	False	NA	NA	False	AATAAA	-32	NA	44986762	44992141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_44986878_44989679_44989772_44989894_44990091_44991810_44991909_44992010
transcript_52273.nnic	chr16	-	851	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674562	True	NA	NA	False	AATAAA	-22	NA	9676921	9666884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667391_9674300_9674398_9676673
transcript_52274.nnic	chr16	-	1182	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-74	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	3	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674558	True	NA	NA	False	AATAAA	-22	NA	9676917	9666884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667391_9674300_9674733_9676673
transcript_52275.nnic	chr16	-	1228	3	NNC	ENSG00000260362.1	novel	660	2	NA	NA	-82	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	11	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674566	True	NA	NA	False	AATAAA	-22	NA	9676925	9666884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_9667391_9674300_9674771_9676673
transcript_52279.nnic	chr16	+	904	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTTGGCTCATTGAGACT	9674242	False	NA	-98	True	AATACA	-15	NA	9674265	9717438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_9674462_9716730
transcript_52281.nnic	chr16	+	1448	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	106	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGACTGTGTTTCTTGAT	9673823	False	NA	17	True	AATAAA	-32	NA	9673836	9717553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_9674462_9716730
transcript_52283.nnic	chr16	+	1555	2	Antisense	novelGene_ENSG00000260362.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	30	junction_1	0	130	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTACTTGTCCCTCAGGTTT	9673823	False	NA	12	True	AATAAA	-26	NA	9673836	9717660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_9674462_9716730
transcript_52286.known	chr16	-	660	2	FSM	ENSG00000260362.1	ENST00000561538.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGATGCATTGCCTTTTG	-9674484	True	NA	NA	False	AATAAA	-22	NA	9676843	9666884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_9667375_9676673
transcript_52287.nnic	chr16	+	810	2	Antisense	novelGene_ENSG00000183454.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAACAGACCAAGAAGGAAAA	9672102	True	NA	NA	False	AAAAAG	-1	NA	9674332	9755867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_9674462_9755186
transcript_52289.nnic	chr16	+	624	4	Fusion	ENSG00000287830.1_ENSG00000283221.1	novel	179	2	NA	NA	-120252	39	multi-exon	FALSE	canonical	2	8	junction_3	22.9927524813074	34	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	9672154	True	NA	17	True	AATAAA	-20	NA	9674384	9810765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9810465
transcript_52305.nnic	chr16	+	1056	4	Fusion	ENSG00000287830.1_ENSG00000283221.1	novel	179	2	NA	NA	-120684	39	multi-exon	FALSE	canonical	2	8	junction_3	22.9927524813074	49	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTTGTTATTGGTTAT	9673939	False	NA	17	True	AATAAA	-20	NA	9673952	9810765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr16_+_9674462_9794521_9794723_9805478_9805525_9810465
transcript_52309.known	chr16	+	1797	2	FSM	ENSG00000287830.1	ENST00000653203.1	1797	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCCCAGAACTGAGAATAAA	NA	False	NA	-22	True	NA	NA	NA	9808855	9810726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_9810392_9810465
transcript_52311.known	chr16	+	576	3	FSM	ENSG00000166669.14	ENST00000566316.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	1	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383162	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10386123_10387143_10387291_10387377
transcript_52312.nnic	chr16	+	905	3	NNC	ENSG00000166669.14	novel	576	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	33	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383162	True	NA	11	True	AATAAA	-21	NA	10386057	10387741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_10386452_10387143_10387291_10387377
transcript_52314.known	chr16	+	1681	1	FSM	ENSG00000166669.14	ENST00000562396.1	1681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATTAGTTCTCATTGTT	10383165	True	NA	11	True	AATAAA	-21	NA	10386060	10387741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10386100_10387700
transcript_52315.known	chr16	+	559	2	FSM	ENSG00000166669.14	ENST00000570163.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGTATTAGTTCTCAT	10387077	False	NA	7	True	AATAAA	-17	NA	10387091	10387737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10387291_10387377
transcript_5232.known	chr1	+	1335	10	FSM	ENSG00000126088.14	ENST00000651476.1	1335	10	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	308.344844629964	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005163	True	NA	15	True	AATAAA	-16	NA	45012161	45015575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_52321.known	chr16	-	5097	5	FSM	ENSG00000213853.10	ENST00000359543.8	5097	5	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	3.03108891324554	857	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATCTCCCTCTGCTTCTTT	-10578905	True	NA	NA	False	GATAAA	-20	NA	10580598	10528421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_10533093_10537927_10538075_10543569_10543661_10547539_10547678_10580548
transcript_52344.known	chr16	+	1185	10	FSM	ENSG00000103274.11	ENST00000433392.6	1185	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	78.4551456345803	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740792	True	NA	22	True	AATAAA	-16	NA	10743854	10769351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_52345.known	chr16	+	1231	11	FSM	ENSG00000103274.11	ENST00000283027.10	1231	11	0	0	0	0	multi-exon	TRUE	canonical	3	212	junction_4	26.4166614090426	1492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10740779	True	NA	22	True	AATAAA	-16	NA	10743841	10769351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10743883_10743960_10744066_10747142_10747277_10752609_10752679_10755720_10755754_10756689_10756781_10757872_10758028_10761363_10761475_10761756_10761860_10767948_10768033_10769046
transcript_52346.known	chr16	+	674	4	FSM	ENSG00000103274.11	ENST00000571175.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	116.819899370308	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCCGAGGCCTGTTTCAC	10757855	False	NA	22	True	AATAAA	-16	NA	10757872	10769351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_10758028_10761363_10761475_10761756_10761860_10769046
transcript_52349.nic	chr16	+	2157	10	ISM	ENSG00000038532.16	ENST00000409552.4	3365	21	-42	122801	-25	-20933	5prime_fragment	FALSE	canonical	3	39	junction_9	4.44722135470878	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTGTTTAGTATTTTTAA	10943187	True	NA	NA	False	NA	NA	NA	10944538	11003986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_10944798_10957781_10957911_10962454_10962589_10969160_10969310_10971124_10971231_10972937_10973062_10977224_10977400_10979328_10979383_10982877_10982992_11003073
transcript_5235.known	chr1	+	1106	9	FSM	ENSG00000126088.14	ENST00000491773.6	1106	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	439.575932007202	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAACTATTGTGTAGTTTT	45005249	True	NA	10	True	AATAAA	-11	NA	45012247	45015570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012856_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_52353.known	chr16	+	1865	5	FSM	ENSG00000175643.10	ENST00000572173.1	1865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.6393596310755	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTATGAGTTTTTTT	NA	False	NA	4	True	AATAAA	-8	NA	11249648	11351755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11249779_11295215_11295295_11312828_11312938_11316451_11316885_11350641
transcript_52356.nnic	chr16	+	909	3	NNC	ENSG00000175643.10	novel	1427	2	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	48	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGAGTTTTTTTTTTTA	11338282	True	NA	9	True	AATAAA	-13	NA	11345415	11351760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_11345544_11350641_11350744_11351081
transcript_52361.known	chr16	+	818	2	FSM	ENSG00000175643.10	ENST00000576027.1	818	2	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	0	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCACTCAAACATTTAGAC	11338316	True	NA	NA	False	NA	NA	NA	11345449	11351365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11345544_11350641
transcript_52362.known	chr16	-	680	2	FSM	ENSG00000122304.11	ENST00000241808.9	680	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTGGCCTGTCGGGTTT	-11276449	False	NA	NA	False	AATAAA	-14	NA	11276480	11275638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11275938_11276099
transcript_52363.known	chr16	-	399	2	FSM	ENSG00000175646.4	ENST00000312511.4	399	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCACTCTTCTCTCCTTGT	-11281299	True	NA	NA	False	AATAAA	-14	NA	11281330	11280840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11281036_11281126
transcript_52366.known	chr16	-	714	2	FSM	ENSG00000263080.1	ENST00000572913.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTGTGTCTGTGTCTATC	-11345016	True	NA	NA	False	CATAAA	-1	NA	11345211	11341808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11342424_11345112
transcript_52367.known	chr16	-	505	2	FSM	ENSG00000263080.1	ENST00000572706.1	505	2	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGGACATTAAGGCTATT	-11345002	True	NA	NA	False	ATTAAA	-13	NA	11345197	11344350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11344771_11345112
transcript_52376.known	chr16	-	2440	4	FSM	ENSG00000189067.14	ENST00000622633.5	2440	4	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_3	99.6895180046528	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	-11581443	True	NA	-8	True	AATAAA	-16	NA	11586919	11547721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11586885
transcript_52377.known	chr16	-	2632	4	FSM	ENSG00000189067.14	ENST00000571688.5	2632	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	272.833282427199	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCCCCATTCATTCTCTG	NA	False	NA	-8	True	AATAAA	-16	NA	11587563	11547721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587337
transcript_52385.known	chr16	-	1118	4	FSM	ENSG00000189067.14	ENST00000570904.5	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	218.187992336884	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGACTTCATTAGCACA	-11587200	False	NA	NA	False	NA	NA	NA	11587247	11549106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11549746_11553532_11553690_11556510_11556736_11587150
transcript_52386.known	chr16	-	3116	12	FSM	ENSG00000153066.13	ENST00000283033.10	3116	12	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	22.4595136204263	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCTTGAATGTCATTCAG	-11741915	True	NA	-7	True	AATAAA	-24	NA	11742857	11679082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11679838_11684164_11684246_11687856_11687967_11688302_11688446_11691289_11692083_11698124_11698326_11700451_11700565_11721576_11721671_11730644_11730775_11733981_11734080_11736016_11736234_11742476
transcript_52390.known	chr16	+	3264	2	FSM	ENSG00000184602.6	ENST00000329565.6	3264	2	0	0	0	0	multi-exon	FALSE	canonical	3	626	junction_1	0	484	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTACAATTTTCACCTCTGA	11664809	True	NA	18	True	AATAAA	-33	NA	11668454	11679152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11668541_11675974
transcript_52392.known	chr16	+	808	1	FSM	ENSG00000277369.1	ENST00000615722.1	808	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCGAGGTCTCATTTATA	NA	False	NA	NA	False	NA	NA	NA	11797467	11798275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11797500_11798300
transcript_52393.known	chr16	-	1470	8	FSM	ENSG00000171490.13	ENST00000396503.7	1470	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	826.031896404461	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCCTTTGTAACCTTCTC	-11830584	True	NA	NA	False	NA	NA	NA	11851580	11837717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11851407
transcript_52395.known	chr16	-	710	5	FSM	ENSG00000171490.13	ENST00000573618.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	942.23388152836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGCAGTGAAGGAAAA	-11830522	True	NA	3	True	NA	NA	NA	11851518	11837954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841821_11841906_11841930_11851407
transcript_52397.known	chr16	-	871	7	FSM	ENSG00000171490.13	ENST00000570767.5	871	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_6	909.407988137826	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAGAAGAAAAAAGTTAGTA	-11830546	True	NA	21	True	NA	NA	NA	11851542	11841707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11841821_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850414_11851403
transcript_52398.known	chr16	-	1323	9	FSM	ENSG00000171490.13	ENST00000355674.9	1323	9	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	770.147865266794	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAATCAAAGAAGAGGCA	-11830548	True	NA	-8	True	NA	NA	NA	11851544	11837965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11838114_11839694_11839986_11841694_11841818_11841906_11842001_11846500_11846603_11846694_11846844_11847667_11847807_11850278_11850419_11851407
transcript_52399.known	chr16	-	1603	15	FSM	ENSG00000103342.13	ENST00000420576.6	1603	15	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_14	592.046778350412	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTTCTTGATGACCCTG	-11916070	False	NA	NA	False	NA	NA	NA	11916082	11873118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_11873172_11875760_11875930_11876085_11876176_11877406_11877581_11883014_11883096_11885180_11885275_11886470_11886612_11886776_11886932_11887569_11887751_11891061_11891140_11894953_11894988_11896557_11896786_11897839_11897882_11897993_11898036_11916041
transcript_52404.known	chr16	+	2248	8	FSM	ENSG00000048471.14	ENST00000564111.5	2248	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	0.989743318610787	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11976100	True	NA	NA	False	NA	NA	NA	11976744	12053284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_11976814_11999296_11999359_12002990_12003044_12027319_12027445_12042896_12043078_12046383_12046455_12048371_12048621_12051846
transcript_52407.known	chr16	-	6143	4	FSM	ENSG00000103381.12	ENST00000381774.9	6143	4	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	14.290634073484	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGCAGTTCTT	-12803059	True	NA	NA	False	ATTAAA	-21	NA	12803887	12659798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_12665116_12704623_12705050_12781184_12781404_12803706
transcript_52409.known	chr16	-	1993	3	FSM	ENSG00000103381.12	ENST00000433677.6	1993	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACGCTCTTCTTTTAGTGT	-12803023	True	NA	-1	True	ATTAAA	-16	NA	12803851	12663486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_12665116_12781184_12781404_12803706
transcript_52411.nnic	chr16	-	765	3	NNC	ENSG00000103381.12	novel	568	2	NA	NA	-21	9198	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	59.5	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATGCTTTGGTTTGCTGGG	-12803080	True	NA	NA	False	AATAAA	-14	NA	12803908	12771775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_12772120_12781184_12781404_12803706
transcript_52412.known	chr16	+	324	1	FSM	ENSG00000241932.1	ENST00000468671.1	324	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAACTAATGAAAAGTCAA	NA	False	NA	NA	False	NA	NA	NA	12881169	12881493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_12881200_12881500
transcript_52427.nnic	chr16	+	804	4	NNC	ENSG00000262801.6	novel	997	5	NA	NA	5370	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.3781471969828	52	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTTCTCTGTCATAGG	13354088	False	NA	NA	False	ATTAAA	-16	NA	13354098	13563012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13354346_13355797_13355917_13474209_13474342_13562706
transcript_52430.nnic	chr16	+	768	4	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6666	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	10.6562449087639	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTAAACCAATGTTTCT	13355359	False	NA	NA	False	AATAAA	-15	NA	13355394	13562918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355700_13355797_13355917_13474209_13474342_13562706
transcript_52431.nnic	chr16	+	1829	4	NNC	ENSG00000262801.6	novel	997	5	NA	NA	5699	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_3	10.6562449087639	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTTCTCTGTCATAGG	13354417	False	NA	NA	False	ATTAAA	-16	NA	13354427	13563012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355700_13355797_13355917_13474209_13474342_13562706
transcript_52446.nnic	chr16	+	837	3	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6695	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	7.5	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTGTAAACCAATGTTTCT	13355388	False	NA	NA	False	AATAAA	-15	NA	13355423	13562918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355917_13474209_13474342_13562706
transcript_52447.nnic	chr16	+	931	3	NNC	ENSG00000262801.6	novel	997	5	NA	NA	6695	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	7.5	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTTCTCTGTCATAGG	13355388	False	NA	NA	False	ATTAAA	-16	NA	13355423	13563012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13355917_13474209_13474342_13562706
transcript_52451.nnic	chr16	+	686	3	NNC	ENSG00000262801.6	novel	997	5	NA	NA	7204	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGTTTCTCTGTCATAGG	13355750	False	NA	NA	False	ATTAAA	-16	NA	13355932	13563012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_13356181_13474209_13474342_13562706
transcript_52453.known	chr16	+	2803	8	FSM	ENSG00000175595.16	ENST00000683407.1	2803	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	8.29556065197599	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGATCTTTTCTCTGTTTA	13918614	True	NA	NA	False	NA	NA	NA	13920157	13936727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156_13932286_13934191_13934303_13935145
transcript_52457.known	chr16	+	2073	6	FSM	ENSG00000175595.16	ENST00000575156.5	2073	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	7.57363849150459	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTGAATATCCTTTTTAA	13918613	True	NA	NA	False	AATAAA	-17	NA	13920156	13933247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560_13926757_13928027_13928236_13930709_13930891_13932156
transcript_52460.known	chr16	+	604	3	FSM	ENSG00000175595.16	ENST00000576348.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	3.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTGTGAGATCTACTG	13918647	True	NA	NA	False	NA	NA	NA	13920190	13926801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_13920373_13922030_13922212_13926560
transcript_52470.nic	chr16	+	652	4	NIC	ENSG00000186260.17	novel	545	5	NA	NA	-27	73	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	27.5801861245835	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCCTCATTATGTACCT	14071251	False	NA	NA	False	AATAAA	-16	NA	14071291	14141602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_14071366_14079289_14079355_14140543_14140761_14141306
transcript_52475.nnic	chr16	-	452	3	Antisense	novelGene_ENSG00000201075.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTCTTTGGCTTTTCTT	-14284000	False	NA	NA	False	AATAAA	-15	NA	14284024	14251833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_14252007_14255987_14256104_14283861
transcript_52480.known	chr16	-	3071	24	FSM	ENSG00000140694.17	ENST00000437198.7	3071	24	0	0	0	0	multi-exon	TRUE	canonical	1	107	junction_21	53.4902425602029	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGTTTTCTCCTCTCTT	-14629772	True	NA	-1	True	ATTAAA	-16	NA	14630260	14435700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_52481.known	chr16	-	2100	24	FSM	ENSG00000140694.17	ENST00000341484.11	2100	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	81.5211942010773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACCAAGTTGTCTCCTG	-14629788	True	NA	NA	False	NA	NA	NA	14630276	14436604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14436773_14446887_14447082_14482637_14482828_14552020_14552096_14554064_14554152_14555653_14555710_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630189
transcript_52485.nic	chr16	-	1609	19	NIC	ENSG00000140694.17	novel	1988	12	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	1	6	junction_1	91.1948294234944	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATTGGACTTGTAGTTT	-14629779	True	NA	NA	False	AATAAA	-38	NA	14630267	14576071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_14576277_14580873_14580944_14582180_14582292_14584346_14584423_14584748_14584792_14586317_14586362_14593300_14593379_14599903_14599961_14604145_14604227_14606483_14606527_14608280_14608320_14609057_14609124_14610643_14610810_14617589_14617651_14627105_14627188_14627268_14627337_14628171_14628252_14629596_14629675_14630106
transcript_5249.known	chr1	+	1193	10	FSM	ENSG00000126088.14	ENST00000246337.9	1193	10	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	80.2493029083988	2458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005255	True	NA	15	True	AATAAA	-16	NA	45012253	45015575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_52495.nnic	chr16	+	657	2	NNC	ENSG00000103429.11	novel	1177	3	NA	NA	-55	-10000	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTCTTAAAATATTAGCC	14628196	True	NA	NA	False	AATAAA	-17	NA	14632875	14638452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14633019_14637938
transcript_52496.nnic	chr16	+	713	2	NNC	ENSG00000103429.11	novel	1177	3	NA	NA	-55	-9944	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGCAACCATGATCATA	14628196	True	NA	NA	False	AATAAA	-16	NA	14632875	14638508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14633019_14637938
transcript_52497.known	chr16	+	1414	4	FSM	ENSG00000103429.11	ENST00000562442.5	1414	4	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_2	22.6274169979695	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGGTATTTTGTGTCTG	14628252	True	NA	24	True	TATAAA	-14	NA	14632931	14650589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803
transcript_52498.known	chr16	+	2903	8	FSM	ENSG00000103429.11	ENST00000261658.7	2903	8	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	50.059556367126	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGTAGAGAAAAAGCAATT	14628271	True	NA	19	True	AATAAA	-30	NA	14632950	14669236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14648387_14648593_14649803_14649974_14655065_14655211_14661891_14662066_14664868_14665072_14667634
transcript_52499.known	chr16	+	1177	3	FSM	ENSG00000103429.11	ENST00000566520.5	1177	3	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_2	121.5	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGACGTTTGATATAAA	14628251	True	NA	-9	True	NA	NA	NA	14632930	14650556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14633019_14644273_14644610_14649803
transcript_525.known	SIRV6	+	1435	9	FSM	SIRV6A	SIRV601	1435	9	0	0	0	0	multi-exon	TRUE	canonical	3	2387	junction_3	9022.52467352542	8606	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGACCGGGAGTATACTT	NA	False	NA	NA	False	NA	NA	NA	1000	11826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2470_2621_2740_2829_3106_3165_10724_10819_11031_11109_11205
transcript_5250.known	chr1	+	1102	9	FSM	ENSG00000126088.14	ENST00000636293.1	1102	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_6	342.474725344806	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014735_45014837_45014939_45015007_45015336
transcript_52500.known	chr16	-	587	5	FSM	ENSG00000069764.10	ENST00000567462.1	587	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	6.51920240520265	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTGAGTACAACTTAAAG	NA	False	NA	NA	False	NA	NA	NA	14694276	14672680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14672750_14678644_14678761_14688164_14688272_14690494_14690646_14694132
transcript_52505.known	chr16	-	636	4	FSM	ENSG00000069764.10	ENST00000438167.8	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1.24721912892465	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694308	14672547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14672750_14688164_14688272_14690494_14690646_14694132
transcript_52507.nnic	chr16	-	497	3	NIC	ENSG00000069764.10	novel	636	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACAGCATTCAGTTATTTG	NA	False	NA	NA	False	AATAAA	-20	NA	14694320	14672547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_14672750_14688164_14688272_14694132
transcript_52509.nnic	chr16	+	1566	8	NNC	ENSG00000224712.12	novel	954	7	NA	NA	386	0	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	81.9145896650896	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATGTTATTGCTTTGTTT	NA	False	NA	NA	False	AATAAA	-35	NA	14712074	14726338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14712606_14716067_14716197_14719826_14719927_14720089_14720235_14723191_14723300_14724317_14724379_14724487_14724524_14725882
transcript_5251.known	chr1	+	1173	9	FSM	ENSG00000126088.14	ENST00000636836.1	1173	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	330.054896002165	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013291_45013355_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45015336
transcript_52512.nnic	chr16	-	768	4	NNC	ENSG00000254609.1	novel	355	3	NA	NA	-100	17951	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7.31816613336672	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGGGCACTTGTCTGGTTG	NA	False	NA	NA	False	AATAAA	-18	NA	14733447	14709330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_14709644_14727281_14727389_14729611_14729763_14733250
transcript_52518.nnic	chr16	+	1107	8	NNC	ENSG00000254852.8	novel	954	7	NA	NA	731	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	87.0015247344692	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGAATAAATAAATAATA	NA	False	NA	NA	False	AAGAAA	-5	NA	14751543	14765413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14751661_14755191_14755321_14758946_14759047_14759209_14759355_14762311_14762420_14763437_14763499_14763607_14763644_14765002
transcript_52519.known	chr16	-	706	2	FSM	ENSG00000255277.3	ENST00000542005.2	706	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGTGTGAGCCTTTCTGCTC	NA	False	NA	NA	False	AATAAA	-13	NA	14824702	14822431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_14823069_14824633
transcript_5252.known	chr1	+	1177	9	FSM	ENSG00000126088.14	ENST00000652287.1	1177	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	334.045819274841	590	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45005208	True	NA	15	True	AATAAA	-16	NA	45012206	45015575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45012286_45012906_45013020_45013135_45013216_45013593_45013792_45013908_45014071_45014438_45014577_45014735_45014837_45014939_45015007_45015336
transcript_52522.known	chr16	+	5345	28	FSM	ENSG00000183426.17	ENST00000472413.5	5345	28	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	121.531256740328	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCAGTCCTTATGTTAT	NA	False	NA	NA	False	AATAAA	-25	NA	14922801	14952060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14923150_14923654_14923787_14923976_14924153_14924504_14924639_14925732_14925877_14926003_14926284_14926376_14926591_14926656_14926817_14927206_14927360_14928380_14928526_14929250_14930032_14930165_14930323_14930502_14930756_14930879_14931076_14932570_14932742_14932827_14932972_14933065_14933277_14933366_14933494_14935159_14935398_14937564_14937651_14941811_14941941_14945573_14945674_14945836_14945982_14948929_14949038_14950049_14950111_14950219_14950256_14950751_14950822_14951614
transcript_52524.known	chr16	+	4598	23	FSM	ENSG00000179889.20	ENST00000396410.9	4598	23	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_4	48.2281938049306	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGCCTGAATTAGTAAGA	14975000	False	NA	NA	False	AATAAA	-17	NA	14975025	15038332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_52525.known	chr16	+	2683	22	FSM	ENSG00000179889.20	ENST00000627450.2	2683	22	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	124.697457000185	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGCCCGTGGCAACTTTT	14969526	True	NA	NA	False	NA	NA	NA	14975128	15036604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998342_14998406_15004186_15004334_15006393_15006584_15008778_15008848_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15031734_15031907_15032860_15032980_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_52528.nic	chr16	+	1929	16	NIC	ENSG00000179889.20	novel	2048	17	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_15	159.347753880206	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCGACCTAACTCCATCTAA	14975036	False	NA	NA	False	AATAAA	-41	NA	14975061	15139339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877_15028967_15029950_15030057_15138878
transcript_5253.known	chr1	+	934	4	FSM	ENSG00000126088.14	ENST00000472254.1	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	994	junction_1	56.4092191046818	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGTGTAGTTTTGTTTG	45014033	False	NA	15	True	AATAAA	-16	NA	45014049	45015575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45014577_45014735_45014837_45014939_45015007_45015336
transcript_52532.known	chr16	+	2183	14	FSM	ENSG00000179889.20	ENST00000455313.6	2183	14	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	128.778972152441	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCTCTAAGTAATCAGAC	14969477	True	NA	NA	False	CATAAA	-19	NA	14975079	15029805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703_15022755_15026642_15026707_15028877
transcript_52535.nic	chr16	+	1261	12	ISM	ENSG00000179889.20	ENST00000455313.6	2183	14	-18	6999	-18	5419	5prime_fragment	FALSE	canonical	3	25	junction_6	139.736351511997	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTTTGAATGATTTTAG	14975036	False	NA	9	True	AATATA	-18	NA	14975061	15022806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393_15006584_15009680_15009760_15016128_15016214_15017119_15017169_15017320_15017423_15018839_15018966_15022703
transcript_52537.known	chr16	+	884	9	FSM	ENSG00000179889.20	ENST00000562119.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	164.877037515841	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCGAGGCCTTCCAGAAAGG	14969486	True	NA	NA	False	GGGGCT	-25	NA	14975088	15036197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001789_15033277_15033400_15034285_15034379_15034456_15034554_15035448_15035554_15036015
transcript_52539.nic	chr16	+	1046	6	ISM	ENSG00000179889.20	ENST00000455313.6	2183	14	-18	22893	-18	488	5prime_fragment	FALSE	canonical	3	377	junction_4	68.8958634462186	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTTTAATGTCTTCA	14975036	False	NA	17	True	AATATA	-30	NA	14975061	15006912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_14975221_14997752_14997827_14998339_14998406_15001775_15001857_15004186_15004334_15006393
transcript_5254.nnic	chr1	-	768	3	NNC	ENSG00000162415.7	novel	390	3	NA	NA	2093	-208277	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTTCTTTGGGGGTCTCTT	-45304055	True	NA	NA	False	AATAAA	-16	NA	45304116	45296351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_45296743_45297751_45297939_45303926
transcript_52541.nnic	chr16	+	1344	3	NNC	ENSG00000179889.20	novel	283	3	NA	NA	-13	-19978	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTATATTATTATTATT	14975041	False	NA	NA	False	ATTAAA	-19	NA	14975066	14978384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14976199_14976306_14977300
transcript_52543.nnic	chr16	+	926	3	NNC	ENSG00000179889.20	novel	283	3	NA	NA	-13	-20396	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTATGCGATCATCATT	14975041	False	NA	NA	False	TTTAAA	-27	NA	14975066	14977966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14976199_14976306_14977300
transcript_52546.nnic	chr16	+	861	2	NNC	ENSG00000179889.20	novel	283	3	NA	NA	-2	-20396	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAGTATGCGATCATCATT	14974998	False	NA	NA	False	TTTAAA	-27	NA	14975023	14977966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14977302
transcript_52547.nnic	chr16	+	974	2	NNC	ENSG00000179889.20	novel	283	3	NA	NA	-2	-20283	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTTCTCGTCACGATT	14974998	False	NA	NA	False	NA	NA	NA	14975023	14978079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_14975221_14977302
transcript_52553.known	chr16	-	1210	10	FSM	ENSG00000157045.9	ENST00000287706.8	1210	10	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_9	107.490338354227	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATTTGTTGAGACTTATT	NA	False	NA	-13	True	AATAAA	-17	NA	15056074	15037856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15047996_15048100_15055890
transcript_52556.known	chr16	-	1043	9	FSM	ENSG00000157045.9	ENST00000565187.5	1043	9	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_8	238.169057604047	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCTTATTTTGGCAAAGGC	-15054947	True	NA	-30	True	NA	NA	NA	15056027	15037873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15047854_15047921_15055890
transcript_52559.known	chr16	-	1049	8	FSM	ENSG00000157045.9	ENST00000622833.4	1049	8	0	0	0	0	multi-exon	FALSE	canonical	2	76	junction_7	266.584596214364	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGAGACTTATTTTT	NA	False	NA	-10	True	AATAAA	-20	NA	15056079	15037853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15038211_15038573_15038688_15039968_15040067_15041067_15041122_15041622_15041677_15044333_15044408_15047441_15047551_15055890
transcript_5256.known	chr1	+	1816	1	FSM	ENSG00000186603.7	ENST00000334815.6	1816	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	61	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAATCTTCTCCTGTGCTTC	45325967	True	NA	31	True	AATAAA	-36	NA	45326894	45328710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45326900_45328700
transcript_52560.known	chr16	-	3706	18	FSM	ENSG00000085721.13	ENST00000198767.11	3706	18	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_6	37.6545948339738	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTTTCAATTTCTGTTT	-15093760	True	NA	-22	True	AATAAA	-16	NA	15094272	15060032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_52563.known	chr16	-	2198	17	FSM	ENSG00000085721.13	ENST00000429751.6	2198	17	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_14	65.196817406987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTCTAATATAGGCAGCA	-15093737	True	NA	NA	False	NA	NA	NA	15094249	15061427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15091314_15091372_15092508_15092615_15094144
transcript_52567.nic	chr16	-	775	3	ISM	ENSG00000085721.13	ENST00000564131.1	1001	10	-62	14439	-4	-14439	5prime_fragment	FALSE	canonical	3	289	junction_2	3.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCACTGATTCAGCATT	NA	False	NA	NA	False	TTTAAA	-30	NA	15094315	15090873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_15091372_15092508_15092615_15094144
transcript_52568.known	chr16	-	2128	19	FSM	ENSG00000085721.13	ENST00000563559.5	2128	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	71.0977417988004	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTTCTTTCAATTTCTGT	NA	False	NA	-24	True	AATAAA	-14	NA	15094311	15060034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15060174_15061788_15061906_15063195_15063284_15065218_15065372_15068168_15068278_15070069_15070255_15071120_15071252_15072949_15073081_15074722_15074862_15076557_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_52569.known	chr16	-	1001	10	FSM	ENSG00000085721.13	ENST00000564131.1	1001	10	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_6	43.8890295356396	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGATTCCTTATATGAGTAAT	-15093741	True	NA	NA	False	ATTAAA	-22	NA	15094253	15076434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15076651_15079997_15080097_15083512_15083583_15084641_15084706_15085638_15085699_15086128_15086259_15086364_15086455_15091314_15091372_15092508_15092615_15094144
transcript_5257.known	chr1	-	3071	11	FSM	ENSG00000070759.17	ENST00000372086.4	3071	11	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_2	7.78716893357271	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCAGCCTTCTTACTTG	-45490351	True	NA	-1	True	AATAAA	-17	NA	45491163	45343882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45345559_45345876_45345995_45346692_45346780_45346978_45347063_45347608_45347694_45347917_45348001_45355302_45355450_45385911_45385961_45421724_45421847_45457563_45457872_45490851
transcript_52577.nnic	chr16	-	1167	8	NNC	ENSG00000183793.14	novel	1084	8	NA	NA	702	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_7	126.225098574745	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	-17	True	AATAAA	-21	NA	15377592	15363627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_15364070_15365428_15365465_15365573_15365635_15366652_15366761_15369711_15369857_15370019_15370120_15373714_15373844_15377446
transcript_52578.known	chr16	+	2111	6	FSM	ENSG00000166780.11	ENST00000300006.9	2111	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	17.91758912354	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAATGTCTGTTTAGTAA	NA	False	NA	9	True	ATTAAA	-37	NA	15434587	15588259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15586716
transcript_52581.nic	chr16	+	1443	6	NIC	ENSG00000166780.11	novel	2111	6	NA	NA	3	1	combination_of_known_junctions	FALSE	canonical	1	2	junction_5	55.8261587430122	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATGTCTGTTTAGTAAT	NA	False	NA	10	True	ATTAAA	-38	NA	15434477	15588260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15583155_15583239_15587495
transcript_52586.known	chr16	+	546	4	FSM	ENSG00000166780.11	ENST00000567550.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_3	12.7279220613579	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAACCCATCTTCTGCTCCT	NA	False	NA	NA	False	NA	NA	NA	15434587	15581392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216
transcript_52588.known	chr16	+	1854	5	FSM	ENSG00000166780.11	ENST00000566490.5	1854	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	58.636059724371	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTACTTTTTTTCTTGA	NA	False	NA	21	True	AATAAA	-31	NA	15434474	15587972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15434760_15515304_15515429_15567982_15568057_15581216_15581332_15586716
transcript_52590.known	chr16	-	7730	27	FSM	ENSG00000166783.22	ENST00000396368.8	7730	27	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	12.8000092455588	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTTTCCCAAGTGAG	-15641303	True	NA	-17	True	AATAAA	-20	NA	15643154	15594386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15596938_15598853_15599025_15600427_15600554_15600640_15600702_15601990_15602204_15604167_15604399_15608290_15608519_15609522_15609726_15610974_15611109_15611591_15611735_15612556_15612778_15615829_15616006_15617051_15617172_15617298_15617536_15620450_15620532_15621732_15621912_15622933_15623124_15624768_15624928_15625015_15625174_15625371_15625801_15630331_15630505_15631380_15631499_15633616_15633844_15634756_15634932_15635655_15636343_15639089_15639292_15643017
transcript_52592.known	chr16	+	3203	9	FSM	ENSG00000072864.16	ENST00000396354.6	3203	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	11.0227038425243	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAAGGGTTTTTTTTCTTTT	15648472	True	NA	18	True	AATAAA	-20	NA	15650244	15726353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_15650295_15664735_15664862_15667285_15667440_15677800_15677950_15687374_15687512_15691143_15691324_15694164_15694257_15696708_15696861_15724190
transcript_52596.known	chr16	-	565	4	FSM	ENSG00000133393.13	ENST00000575744.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	275.918264870032	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTTGAGATGGA	-15883692	True	NA	35	True	AAAAAG	-21	NA	15888603	15867219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15888557
transcript_52603.known	chr16	-	2264	5	FSM	ENSG00000133393.13	ENST00000255759.11	2264	5	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_4	61.7353221421902	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGCAAAGGGTGTTC	-15883692	True	NA	-9	True	AATAAA	-17	NA	15888603	15865718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15884007_15884206_15888557
transcript_52604.known	chr16	-	796	6	FSM	ENSG00000133393.13	ENST00000572415.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	275.967679266975	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTACATTTGTGAATAAAA	-15883712	True	NA	-52	True	AAAACA	-13	NA	15888623	15867306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15873490_15873628_15879803_15879889_15882948_15883049_15884007_15884206_15888557
transcript_52605.known	chr16	-	2039	3	FSM	ENSG00000133393.13	ENST00000573968.5	2039	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	244	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTTGGTGCAAAGGGTGT	-15883691	True	NA	-11	True	AATAAA	-15	NA	15888602	15865720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15884007_15884206_15888557
transcript_52606.known	chr16	-	530	4	FSM	ENSG00000133393.13	ENST00000575073.5	530	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	222.873656286845	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGAGTTTCTACAAAACAC	-15883714	True	NA	-83	True	NA	NA	NA	15888625	15867337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_15867517_15879803_15879889_15884007_15884206_15888557
transcript_52607.known	chr16	-	714	2	FSM	ENSG00000091262.17	ENST00000575728.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	16223467	16221186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_16221832_16223398
transcript_52608.nnic	chr16	+	1550	8	NIC	ENSG00000183889.12	novel	1141	6	NA	NA	346	0	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	147.088755657312	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATACTGCAGTCCTTATG	NA	False	NA	NA	False	AATAAA	-21	NA	16336370	16350590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_16336843_16340305_16340435_16344044_16344145_16344307_16344453_16347402_16347511_16348526_16348588_16348696_16348733_16350091
transcript_52612.known	chr16	-	4235	31	FSM	ENSG00000185164.15	ENST00000622306.5	4235	31	0	0	0	0	multi-exon	TRUE	canonical	3	495	junction_20	235.724471929977	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCATAGATGTATTTCTT	-18554158	True	NA	NA	False	AATAAA	-26	NA	18562097	18499926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18500568_18500990_18501084_18506872_18506993_18509165_18509268_18511545_18511657_18513349_18513434_18514341_18514484_18515882_18516011_18517188_18517303_18519228_18519356_18519500_18519661_18520596_18520680_18520764_18520984_18523843_18523940_18524488_18524553_18527536_18527625_18529500_18529638_18531036_18531169_18531465_18531608_18533004_18533180_18538525_18538677_18538858_18538965_18542171_18542262_18542593_18542732_18543616_18543770_18547227_18547301_18549520_18549628_18551438_18551540_18554806_18554853_18557701_18557792_18561875
transcript_52613.known	chr16	+	796	2	FSM	ENSG00000256340.9	ENST00000565118.2	813	2	0	17	0	-17	multi-exon	FALSE	canonical	3	20	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTGCTCATCCATCC	NA	False	NA	NA	False	AATAAA	-21	NA	18571161	18573522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_18571312_18572876
transcript_52628.known	chr16	-	2203	5	FSM	ENSG00000134419.15	ENST00000322989.8	2203	5	0	0	0	0	multi-exon	FALSE	canonical	3	1451	junction_4	5500.24128448016	23329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCATTTGTTGTCACCATT	-18727086	True	NA	-4	True	AATAAA	-18	NA	18790334	18781294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18790243
transcript_52629.known	chr16	-	418	4	FSM	ENSG00000134419.15	ENST00000574723.5	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	5222.86168898069	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCACTTGGTCGTTTTG	-18727114	True	NA	-27	True	AATAAA	-20	NA	18790362	18782961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788980_18789119_18790309
transcript_52630.known	chr16	-	802	5	FSM	ENSG00000134419.15	ENST00000565420.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	6031.56039097678	13344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGCTTCCACTTGGT	-18727012	True	NA	-34	True	AATAAA	-13	NA	18790260	18782968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788143_18788980_18789119_18789896
transcript_52631.known	chr16	-	589	6	FSM	ENSG00000134419.15	ENST00000576008.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	5943.75957118052	2297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727114	True	NA	-33	True	AATAAA	-14	NA	18790362	18782967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18786239_18786337_18788062_18788143_18788980_18789119_18790309
transcript_52632.known	chr16	-	427	5	FSM	ENSG00000134419.15	ENST00000562935.5	427	5	0	0	0	0	multi-exon	FALSE	canonical	2	134	junction_3	5658.42439973355	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727086	True	NA	-33	True	AATAAA	-14	NA	18790334	18782967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788106_18788980_18789119_18790309
transcript_52633.known	chr16	-	481	5	FSM	ENSG00000134419.15	ENST00000569365.6	481	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5708.00862823454	2256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18727086	True	NA	-33	True	AATAAA	-14	NA	18790334	18782967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18783103_18784737_18784824_18788062_18788160_18788980_18789119_18790309
transcript_52634.known	chr16	-	2278	6	FSM	ENSG00000170540.15	ENST00000304414.12	2278	6	0	0	0	0	multi-exon	FALSE	canonical	3	2796	junction_3	105.286276408656	5401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCTCACTTTCTTTATA	-18748510	True	NA	-6	True	AATAAA	-16	NA	18801549	18791668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18793371_18794598_18794684_18795463_18795582_18797924_18798045_18798700_18798835_18801430
transcript_52635.known	chr16	-	778	4	FSM	ENSG00000170540.15	ENST00000569976.5	778	4	0	0	0	0	multi-exon	FALSE	canonical	3	2796	junction_1	131.251243380354	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGCCTATAATCCCAGC	-18748509	True	NA	NA	False	AGTAAA	-44	NA	18801548	18795175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18795582_18797924_18798045_18798700_18798835_18801430
transcript_52636.known	chr16	-	2190	4	FSM	ENSG00000134419.15	ENST00000576436.5	2190	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	6656.39426917206	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGCTTCCACTTGGTC	-18725889	False	NA	-33	True	AATAAA	-14	NA	18789137	18782967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18784824_18786239_18786337_18788062_18788143_18788980
transcript_52637.known	chr16	-	606	2	FSM	ENSG00000134419.15	ENST00000573554.1	606	2	0	0	0	0	multi-exon	FALSE	canonical	3	6711	junction_1	0	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCCAGCCTGGGCGACAG	-18727092	True	NA	NA	False	NA	NA	NA	18790340	18788543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18789119_18790309
transcript_52638.known	chr16	-	16062	63	FSM	ENSG00000157106.18	ENST00000446231.7	16062	63	0	0	0	0	multi-exon	TRUE	canonical	1	16	junction_12	24.5350998332867	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGCATTTAAGTTCTGAA	-18920689	True	NA	-7	True	AATAAA	-18	NA	18926408	18804859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_18809647_18811760_18811868_18811947_18812128_18815174_18815282_18815439_18815652_18816301_18816530_18817290_18817471_18819501_18819655_18828030_18828169_18829285_18829756_18829925_18830116_18830218_18830370_18832939_18833167_18834203_18834439_18834891_18835165_18835932_18836213_18836359_18836533_18837252_18837444_18838013_18838233_18838356_18838467_18838550_18838690_18839697_18839947_18841564_18841795_18842207_18842455_18845428_18845652_18847452_18847608_18847815_18848034_18849216_18849379_18849948_18850127_18850236_18850468_18852066_18852206_18852317_18852463_18853582_18853868_18854655_18854905_18858169_18858291_18859021_18859182_18859555_18859704_18860666_18860777_18863649_18863852_18864001_18864145_18866620_18866776_18868189_18868355_18868522_18868720_18869103_18869304_18869853_18869995_18870609_18870712_18870800_18870889_18871363_18871483_18872183_18872346_18872493_18872625_18876123_18876394_18877130_18877233_18879494_18879720_18882164_18882339_18884069_18884168_18885089_18885163_18885540_18885667_18889371_18889586_18890862_18890922_18892217_18892355_18896051_18896208_18896792_18896957_18925949
transcript_52640.known	chr16	+	714	7	FSM	ENSG00000167186.11	ENST00000568985.5	714	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	33.4435677256812	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGCAGACCCTTCACAA	19066922	True	NA	-86	True	NA	NA	NA	19067640	19079162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080_19078160_19079127
transcript_52641.known	chr16	+	2642	6	FSM	ENSG00000167186.11	ENST00000321998.10	2642	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.319217855735	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTACTGATCTGCTCTTTAA	19066895	True	NA	6	True	AATAAA	-22	NA	19067613	19080095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19067738_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_52643.known	chr16	+	819	6	FSM	ENSG00000167186.11	ENST00000544894.6	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	36.5874295352926	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGCAGTGTTGATTTTTC	19067825	True	NA	25	True	AATAAA	-29	NA	19067916	19078304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19068009_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_52645.known	chr16	+	703	5	FSM	ENSG00000167186.11	ENST00000566049.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.2737510064412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTTTTTTTTTTTAA	19066907	True	NA	4	True	AATAAA	-8	NA	19067625	19078283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19067738_19071927_19072107_19075720_19075861_19077305_19077375_19078080
transcript_52650.known	chr16	+	2575	6	FSM	ENSG00000167186.11	ENST00000569127.1	2575	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	33.5583074662594	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGACTGTGGTATTTTGT	19067897	False	NA	14	True	AATAAA	-21	NA	19067988	19079262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19068879_19071927_19072107_19073920_19074036_19075720_19075861_19077305_19077375_19078080
transcript_52651.known	chr16	-	484	3	FSM	ENSG00000261465.7	ENST00000576433.6	484	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAACTTCTGTTCTTCTG	-19067397	False	NA	NA	False	ATTAAA	-28	NA	19067424	19062753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19062896_19063804_19064040_19067317
transcript_52652.known	chr16	+	1088	3	FSM	ENSG00000260430.2	ENST00000568032.2	1088	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGGGGATGTTTGTTATG	NA	False	NA	NA	False	AATAAA	-23	NA	19086830	19098332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19087001_19093220_19093478_19097671
transcript_5266.known	chr1	-	1823	17	FSM	ENSG00000132781.20	ENST00000372104.5	1823	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	86.3030407561055	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45339890	False	NA	-2	True	AGTAAA	-20	NA	45339935	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45338506_45338657_45339898
transcript_52661.known	chr16	-	2238	6	FSM	ENSG00000006007.12	ENST00000564172.1	2238	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	80.1947629212781	494	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGATAACTAGAAC	-19515480	True	NA	NA	False	NA	NA	NA	19522123	19502382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19503618_19504880_19505093_19507686_19507780_19510838_19510945_19517013_19517186_19521703
transcript_52670.known	chr16	+	510	2	FSM	ENSG00000260934.1	ENST00000569345.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATGGATTGAGTAAGATAA	NA	False	NA	NA	False	NA	NA	NA	19501688	19502286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19501890_19501977
transcript_52671.known	chr16	+	5446	15	FSM	ENSG00000103540.16	ENST00000381396.9	5446	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	23.6293660256789	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTTTGATTGTTTTTAT	NA	False	NA	NA	False	AATAAA	-20	NA	19523856	19553408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19524089_19527866_19528023_19532415_19532545_19535939_19537588_19540656_19540788_19541886_19542065_19542620_19542761_19542877_19542995_19544796_19544899_19545093_19545211_19545816_19545891_19546411_19546475_19547954_19548015_19548514_19548601_19551195
transcript_52672.known	chr16	+	2600	2	FSM	ENSG00000103540.16	ENST00000569190.1	2600	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCGATTTGCTCTTTT	19521040	True	NA	NA	False	AATAAA	-18	NA	19523878	19527169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19524089_19524779
transcript_52673.known	chr16	+	673	3	FSM	ENSG00000103540.16	ENST00000573412.1	673	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATTTTGGTGGAGGAAGAC	19521103	True	NA	NA	False	NA	NA	NA	19523941	19525799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19524089_19524779_19525225_19525718
transcript_52674.known	chr16	+	3606	31	FSM	ENSG00000103544.16	ENST00000417362.7	3606	31	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	43.0751926544992	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTCCTCCAGAAGAGAAAGA	19551495	True	NA	62	True	NA	NA	NA	19555702	19701163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524_19581654_19591789_19591875_19601663_19601724_19608177_19608275_19608973_19609022_19610321_19610416_19616113_19616192_19616685_19616809_19626176_19626224_19627693_19627806_19628636_19628754_19629766_19629821_19633091_19633173_19637593_19637657_19640014_19640101_19642395_19642477_19644885_19644950_19647783_19647883_19650381_19650460_19651975_19652091_19669159_19669300_19682224_19682391_19691352_19691472_19699501_19699649_19700377
transcript_52679.nic	chr16	+	1170	7	ISM	ENSG00000103544.16	ENST00000513947.8	2501	14	-97	35998	-74	-2	5prime_fragment	FALSE	canonical	3	326	junction_1	60.1758995685888	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATGCATGCTTATGTGA	19551421	True	NA	NA	False	AATAAA	-16	NA	19555628	19582083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_19555747_19564850_19564951_19569423_19569592_19573118_19573242_19575097_19575123_19579051_19579129_19581524
transcript_52680.known	chr16	-	394	1	FSM	ENSG00000276571.1	ENST00000621246.1	394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTCTGCTCTGCTATTG	NA	False	NA	-3	True	AATACA	-16	NA	19694428	19694034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19694000_19694400
transcript_52692.known	chr16	-	6422	5	FSM	ENSG00000103550.14	ENST00000219837.12	6422	5	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	105.411099984774	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGCTGTCTGAGTTTCTG	-19704746	True	NA	-7	True	AATAAA	-30	NA	19718227	19701936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19707222_19710508_19710587_19711371_19711441_19714117_19715038_19718157
transcript_52706.nic	chr16	-	1255	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-303	3904	-303	635	5prime_fragment	FALSE	canonical	3	836	junction_1	0	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGAGGAAAGAGAGTG	-19718522	False	NA	15	True	AAGAAA	-3	NA	19718538	19714163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_52710.nic	chr16	-	749	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-17	4124	-17	415	5prime_fragment	FALSE	canonical	3	836	junction_1	0	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCACCAGGAGGGAGATGCC	-19718236	False	NA	18	True	AAGAAA	-8	NA	19718252	19714383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_52713.nic	chr16	-	551	2	ISM	ENSG00000103550.14	ENST00000565844.1	1394	4	-4	4309	-4	230	5prime_fragment	FALSE	canonical	3	836	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGGCCCAGGACCCCACAG	-19704758	True	NA	NA	False	AAAACA	-16	NA	19718239	19714568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_19715038_19718157
transcript_52717.known	chr16	-	1020	2	FSM	ENSG00000103550.14	ENST00000564480.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGCATGTAGAACCTGAGAC	-19704650	True	NA	NA	False	AAAAAG	-37	NA	19718131	19714798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19715038_19717350
transcript_52718.known	chr16	-	2078	2	FSM	ENSG00000167191.12	ENST00000562348.1	2078	2	0	0	0	0	multi-exon	FALSE	canonical	3	977	junction_1	0	221	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCCTAGTCTCTGCTGTCT	-19862326	False	NA	-33	True	AATAAA	-19	NA	19862340	19858970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_19860545_19861836
transcript_52721.known	chr16	+	615	2	FSM	ENSG00000263237.1	ENST00000577173.1	615	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGTTAATAATCATGATC	20385942	True	NA	NA	False	NA	NA	NA	20385956	20391164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20386015_20390607
transcript_52723.nic	chr16	+	2234	15	NIC	ENSG00000005187.12	novel	1931	14	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	9.04326336257537	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTAGTGTCAATGTTCCT	20763767	True	NA	14	True	AATAAA	-20	NA	20763998	20797156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20779796_20779908_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_52724.known	chr16	+	2533	14	FSM	ENSG00000005187.12	ENST00000289416.10	2533	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	6.68655809603099	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACTTGTGGTTCCTGAA	20763782	True	NA	NA	False	AATAAA	-17	NA	20764013	20797581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077_20786159_20790586_20790689_20792001_20792130_20792235_20792336_20796369_20796490_20796885
transcript_52727.known	chr16	+	1517	9	FSM	ENSG00000005187.12	ENST00000440284.6	1517	9	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	3.57071421427143	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTAGCTTCTTGGTCTCCA	20763808	True	NA	16	True	TATAAA	-21	NA	20764039	20786314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20764126_20769983_20770254_20775838_20776050_20777372_20777581_20780713_20780858_20780973_20781131_20781707_20781788_20784983_20785108_20786077
transcript_52732.known	chr16	-	2081	14	FSM	ENSG00000166743.10	ENST00000520010.6	2081	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.835598499323093	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCTGTGTTGAGCATTTA	NA	False	NA	NA	False	AATAAA	-17	NA	20697680	20623234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20623573_20624095_20624216_20625422_20625523_20627188_20627317_20636738_20636841_20637370_20637452_20640460_20640585_20661793_20661874_20669826_20669987_20671530_20671672_20682255_20682464_20685192_20685404_20690996_20691240_20697635
transcript_52733.known	chr16	-	4122	5	FSM	ENSG00000066654.14	ENST00000381337.6	4122	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	106.175267835782	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	NA	False	NA	-13	True	AATAAA	-16	NA	20742084	20733663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20736359_20736859_20737287_20737707_20737957_20738896_20739072_20741508
transcript_52738.known	chr16	-	4357	4	FSM	ENSG00000066654.14	ENST00000396083.7	4357	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_3	31.4430702487315	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGTGTTCTAATATTTTTT	-20734917	True	NA	-13	True	AATAAA	-16	NA	20741818	20733663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20737287_20737707_20737957_20738896_20739072_20741508
transcript_52744.known	chr16	-	1479	11	FSM	ENSG00000196678.14	ENST00000300005.7	1479	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.9354479128506	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTAGTACCTGTGGTT	-20805500	True	NA	0	True	AATAAA	-18	NA	20806473	20780192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20780735_20789478_20789558_20790849_20790933_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_52746.known	chr16	-	2903	10	FSM	ENSG00000196678.14	ENST00000563117.5	2903	10	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_9	24.7421268185694	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACTTTTATAAGTTCTT	-20806655	False	NA	NA	False	NA	NA	NA	20806676	20797373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20805714_20805946_20806407
transcript_52749.known	chr16	-	3502	9	FSM	ENSG00000196678.14	ENST00000357967.9	3502	9	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_8	21.8288799529431	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTATGCATTTGTATGT	-20805499	True	NA	-2	True	AATAAA	-21	NA	20806472	20796339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20799068_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_5275.known	chr1	-	1742	16	FSM	ENSG00000132781.20	ENST00000481571.5	1742	16	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_14	73.0286397396407	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45339294	True	NA	-2	True	AGTAAA	-20	NA	45340388	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45340218
transcript_52751.known	chr16	-	2646	9	FSM	ENSG00000196678.14	ENST00000569729.5	2646	9	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	26.6103245940368	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAGTTATGCATTTGT	-20805503	True	NA	-6	True	AATAAA	-17	NA	20806476	20796343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20798212_20799262_20799352_20799956_20800039_20800301_20800403_20801202_20801360_20802795_20802924_20803432_20803517_20803602_20803671_20806407
transcript_52756.known	chr16	-	230	4	FSM	ENSG00000196678.14	ENST00000563537.5	230	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	36.012343562852	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAACACATCAACTGGACAG	-20805496	True	NA	NA	False	NA	NA	NA	20806469	20802902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20802924_20803432_20803512_20803602_20803671_20806407
transcript_52760.known	chr16	+	2691	20	FSM	ENSG00000005189.20	ENST00000261377.11	2691	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	10.6879692636445	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805708	True	NA	11	True	AATAAA	-20	NA	20806526	20849665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_52761.known	chr16	+	2604	19	FSM	ENSG00000005189.20	ENST00000348433.10	2604	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	12.998100525998	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGGGATGTCCACAGAT	20805702	True	NA	11	True	AATAAA	-20	NA	20806520	20849665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814926_20815054_20816115_20816213_20821761_20821903_20824438_20824528_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_52762.known	chr16	+	2549	19	FSM	ENSG00000005189.20	ENST00000566993.5	2549	19	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.5633012516605	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATAAATGCCTAAAGTTCA	20805677	True	NA	-15	True	NA	NA	NA	20806495	20849639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20806706_20806951_20807092_20813189_20813303_20814984_20815054_20816115_20816213_20821761_20821903_20825832_20825949_20827057_20827197_20827352_20827448_20828434_20828538_20832155_20832260_20833002_20833124_20839754_20839860_20840330_20840469_20843933_20844027_20844628_20844846_20845053_20845242_20846220_20846340_20849398
transcript_5277.known	chr1	-	1708	16	FSM	ENSG00000132781.20	ENST00000456914.7	1708	16	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_15	72.7554808931946	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45337812	True	NA	-2	True	AGTAAA	-20	NA	45339970	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339898
transcript_52770.known	chr16	+	857	5	FSM	ENSG00000102897.10	ENST00000568663.5	857	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	61.0834470212676	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCCCTAGAGTTTCTCA	20899874	True	NA	NA	False	NA	NA	NA	20899901	20924263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900005_20900297_20900536_20915555_20915715_20920121_20920215_20923999
transcript_52772.known	chr16	+	1626	5	FSM	ENSG00000102897.10	ENST00000219168.8	1626	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	52.8695328142778	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	20900521	False	NA	15	True	AATAAA	-15	NA	20900752	20925004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900890_20902485_20902718_20915555_20915715_20920121_20920215_20923999
transcript_52774.known	chr16	+	1378	4	FSM	ENSG00000102897.10	ENST00000567954.6	1378	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	41.7212975189731	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	20899663	True	NA	17	True	AATAAA	-17	NA	20900770	20925006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900890_20915555_20915715_20920121_20920215_20923999
transcript_52778.known	chr16	+	931	4	FSM	ENSG00000102897.10	ENST00000562740.5	931	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	54.1623075169029	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGCGGAAGGATGTAAG	20900434	False	NA	NA	False	NA	NA	NA	20900665	20924381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900890_20902485_20902718_20920121_20920215_20923999
transcript_5278.known	chr1	-	1888	16	FSM	ENSG00000132781.20	ENST00000372115.7	1888	16	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_2	59.5790418034918	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	NA	False	NA	-2	True	AGTAAA	-20	NA	45340470	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_52780.known	chr16	+	1399	3	FSM	ENSG00000102897.10	ENST00000412082.6	1399	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	65	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTTGTCTGTCTATTCT	20900207	False	NA	15	True	AATAAA	-15	NA	20900234	20925004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_20900536_20920121_20920215_20923999
transcript_52783.nnic	chr16	+	1222	3	NIC	ENSG00000102897.10	novel	1378	4	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	66	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGTCTGTCTATTCTTT	20899660	True	NA	17	True	AATAAA	-17	NA	20900767	20925006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_20900890_20920121_20920215_20923999
transcript_52785.known	chr16	-	6136	3	FSM	ENSG00000188215.10	ENST00000324344.9	6136	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	12.5	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTGATATTTCTACAAAAA	-20897725	True	NA	-6	True	AATAAA	-15	NA	20900358	20854924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_20860370_20862107_20862644_20900203
transcript_52788.nic	chr16	+	484	2	ISM	ENSG00000102897.10	ENST00000562740.5	931	4	27	21609	27	2281	5prime_fragment	FALSE	canonical	3	32	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGTCTCCCCCAGGTAC	20900461	False	NA	3	True	GATAAA	-14	NA	20900692	20902772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_20900890_20902485
transcript_5279.known	chr1	-	1662	16	FSM	ENSG00000132781.20	ENST00000528013.6	1662	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	88.270543721498	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTCTGAAAGCCCCCATT	-45339901	False	NA	-66	True	NA	NA	NA	45339946	45329305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333604_45334390_45334512_45339898
transcript_52793.nnic	chr16	+	506	4	NNC	ENSG00000289640.1	novel	479	2	NA	NA	-8	8817	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAATGAACTCACAGTTTG	21116388	True	NA	NA	False	AATAAA	-20	NA	21116430	21130108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_21116538_21120911_21120990_21129219_21129414_21129981
transcript_52795.known	chr16	+	1593	7	FSM	ENSG00000011638.11	ENST00000573487.5	1593	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	38.775708317909	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAACAAGCCCTTCTGTGG	NA	False	NA	NA	False	AATGAA	-16	NA	21158376	21179987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21178796_21178933_21179474
transcript_52796.known	chr16	+	713	6	FSM	ENSG00000011638.11	ENST00000572599.5	713	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.1029410658585	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGATTATGGCTTAGAAGA	21156638	True	NA	NA	False	NA	NA	NA	21158704	21179612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21160977_21161009_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_5280.known	chr1	-	1891	16	FSM	ENSG00000132781.20	ENST00000672818.3	1891	16	0	0	0	0	multi-exon	TRUE	canonical	1	15	junction_14	76.3806258157132	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340395	False	NA	-2	True	AGTAAA	-20	NA	45340440	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333595_45334390_45334512_45340218
transcript_52805.known	chr16	+	1378	6	FSM	ENSG00000011638.11	ENST00000451578.6	1378	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	44.6748251255671	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTTCTTTTTTTTTTTTT	21156622	True	NA	NA	False	NA	NA	NA	21158688	21180220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21166839_21166912_21170436_21170606_21174009_21174149_21179474
transcript_52810.known	chr16	+	1812	5	FSM	ENSG00000011638.11	ENST00000261388.7	1812	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	9.3407708461347	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGGAATTACTGAGTGGTT	21156612	True	NA	23	True	AATAAA	-20	NA	21158678	21180609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21160977_21161279_21170436_21170606_21174009_21174149_21179474
transcript_52813.known	chr16	+	1717	5	FSM	ENSG00000011638.11	ENST00000233047.9	1717	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	23.8890665368072	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTGAGTGGTTTATTTGC	21156607	True	NA	30	True	AATAAA	-27	NA	21158673	21180616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21174009_21174149_21179474
transcript_52818.known	chr16	+	584	4	FSM	ENSG00000011638.11	ENST00000572258.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	34.4995974211616	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGGGATTATGGCTTAGA	21156594	True	NA	NA	False	NA	NA	NA	21158660	21179609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21158747_21161084_21161279_21170436_21170606_21179474
transcript_52821.nic	chr16	+	1693	2	ISM	ENSG00000011638.11	ENST00000577162.1	305	4	-59	4308	-10	-4308	intron_retention	FALSE	canonical	3	81	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACTATTTTGTGGTGTAT	21156584	True	NA	NA	False	TATAAA	-25	NA	21158650	21162574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_21158747_21160977
transcript_52824.known	chr16	-	2295	19	FSM	ENSG00000103310.11	ENST00000574091.6	2295	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGCCTTCCACATTC	NA	False	NA	NA	False	AATAAA	-14	NA	21211574	21197449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_21197623_21197765_21197850_21198778_21198863_21199569_21199667_21199742_21199879_21201368_21201559_21201705_21201831_21201931_21202024_21202103_21202292_21203124_21203252_21204029_21204212_21204307_21204405_21205419_21205585_21205730_21205776_21206837_21206991_21209630_21209726_21210108_21210193_21211306_21211396_21211485
transcript_52832.known	chr16	+	559	3	FSM	ENSG00000189149.12	ENST00000561968.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAATGGTCCTCACATTT	21300769	True	NA	NA	False	NA	NA	NA	21300880	21316886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21301328_21315883_21315971_21316861
transcript_52835.known	chr16	+	3153	5	FSM	ENSG00000197006.15	ENST00000358154.8	3153	5	0	0	0	0	multi-exon	FALSE	canonical	3	506	junction_4	127.723089142097	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCGTGTAAGTGCTTCA	21585417	True	NA	28	True	AATAAA	-19	NA	21599576	21657471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655226
transcript_52836.known	chr16	+	1817	5	FSM	ENSG00000197006.15	ENST00000396014.8	1817	5	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_4	234.273744794418	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAACAGAAACAAA	21585398	True	NA	NA	False	NA	NA	NA	21599557	21656119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21599899_21612644_21612836_21617864_21618075_21624930_21625116_21655229
transcript_52841.nnic	chr16	-	1389	8	NIC	ENSG00000248124.9	novel	1178	8	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_6	49.9824458981269	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21819035	True	NA	NA	False	AATAAA	-20	NA	21820455	21810426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819108_21819482_21820294
transcript_52842.known	chr16	-	1151	8	FSM	ENSG00000248124.9	ENST00000551681.2	1178	8	27	0	10	0	multi-exon	FALSE	canonical	3	45	junction_2	45.0219900919177	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	-21818990	True	NA	NA	False	AATAAA	-20	NA	21820410	21810426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21819301_21819482_21820294
transcript_52845.nic	chr16	-	1048	7	FSM	ENSG00000248124.9	ENST00000692968.1	1001	7	-50	3	-46	0	multi-exon	FALSE	canonical	3	29	junction_6	53.9557431810759	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTCAGGTTTGTGGGTT	NA	False	NA	NA	False	AATAAA	-20	NA	21820487	21810426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21820294
transcript_52846.nic	chr16	-	789	7	FSM	ENSG00000248124.9	ENST00000692968.1	1001	7	-50	262	-46	-259	multi-exon	FALSE	canonical	3	29	junction_6	53.9557431810759	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGTCTTACATTGCAT	NA	False	NA	NA	False	ATTAAA	-1	NA	21820487	21810685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_21810839_21811777_21811838_21812285_21812416_21812521_21812612_21817461_21817519_21818655_21818762_21820294
transcript_52852.nic	chr16	-	560	2	ISM	ENSG00000248124.9	ENST00000551681.2	1178	8	-93	8731	-89	-8731	5prime_fragment	FALSE	canonical	3	124	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGCCACGTAGAGATTTG	NA	False	NA	NA	False	NA	NA	NA	21820530	21819157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_21819482_21820294
transcript_52856.known	chr16	+	1914	14	FSM	ENSG00000140740.11	ENST00000268379.9	1914	14	0	0	0	0	multi-exon	FALSE	canonical	3	1018	junction_9	47.4736924968971	2037	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATATTCCCATTCATTC	21938736	True	NA	58	True	AATAAA	-38	NA	21953360	21983660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_21953457_21957234_21957319_21957416_21957567_21958534_21958600_21962459_21962517_21962760_21962886_21965407_21965506_21968627_21968686_21971524_21971621_21971922_21972123_21973895_21973977_21976166_21976244_21980546_21980701_21983087
transcript_52857.nnic	chr16	+	996	4	NIC	ENSG00000185716.12	novel	1359	7	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_3	9.46337971105226	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTCCATTCCTTTGTT	22007633	False	NA	26	True	AATAAA	-16	NA	22008209	22087534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_22008408_22075486_22075700_22085643_22085751_22087056
transcript_52859.known	chr16	+	4469	3	FSM	ENSG00000185716.12	ENST00000542527.7	4469	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	10	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTTCTATTACTTTGAAAT	22007534	True	NA	NA	False	AATAAA	-24	NA	22008110	22084654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22008408_22075486_22075700_22080695
transcript_5286.known	chr1	-	2209	15	FSM	ENSG00000132781.20	ENST00000672011.1	2209	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_11	79.3990181402305	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGTAAAGTGCTTATTTT	NA	False	NA	-30	True	NA	NA	NA	45340893	45329269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333284_45333325_45333412_45333562_45334390_45334512_45340218
transcript_52861.known	chr16	+	695	2	FSM	ENSG00000185716.12	ENST00000562695.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAATACATAAAAATATAAAT	22008250	True	NA	NA	False	AATAAA	-15	NA	22008282	22076056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22008408_22075486
transcript_52863.known	chr16	+	7398	18	FSM	ENSG00000103319.12	ENST00000263026.10	7398	18	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_4	9.13376185020894	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGACTCAAATGTCTCC	22203985	True	NA	20	True	AATAAA	-20	NA	22206277	22288738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22206680_22225653_22225976_22244629_22244731_22248754_22248816_22250653_22250692_22251150_22251323_22256747_22256898_22257252_22257386_22257642_22257771_22258493_22258696_22260461_22260530_22263109_22263188_22264817_22264881_22266389_22266525_22266687_22266877_22273625_22273751_22280197_22280377_22283886
transcript_52865.known	chr16	+	3690	21	FSM	ENSG00000058600.16	ENST00000299853.10	3690	21	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	27.5664651342895	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATATGTCTCAGCTT	22293567	True	NA	3	True	AGTAAA	-15	NA	22297408	22335096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22332059_22332186_22333643
transcript_52868.known	chr16	+	2469	20	FSM	ENSG00000058600.16	ENST00000359210.8	2469	20	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_19	39.4158172336874	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGGTTTAATATTTTCTT	22293591	True	NA	17	True	AATAAA	-36	NA	22297432	22334025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22297538_22302930_22303005_22305155_22305207_22308147_22308226_22308924_22309041_22309427_22309511_22313619_22313728_22314078_22314129_22315088_22315209_22316600_22316687_22316994_22317040_22317114_22317207_22318825_22318947_22322849_22322932_22324353_22324414_22324502_22324661_22325204_22325267_22325760_22326279_22328509_22328588_22333643
transcript_52871.nic	chr16	-	1487	6	NIC	ENSG00000257122.5	novel	578	4	NA	NA	255	-3090	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	41.1679486979859	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATTTTTGACACA	-22437121	True	NA	NA	False	NA	NA	NA	22437460	22421761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_22422215_22429795_22429949_22432725_22432835_22434626_22434812_22435681_22435813_22437004
transcript_52872.known	chr16	-	2704	5	FSM	ENSG00000140743.8	ENST00000268383.7	2704	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	9.98436277385793	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGGATCTGTGTCTTAC	-22371292	True	NA	NA	False	AATAAA	-19	NA	22374619	22345935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_22347824_22349278_22349444_22349700_22349850_22364901_22365015_22374230
transcript_52873.known	chr16	+	2661	9	FSM	ENSG00000257838.5	ENST00000550753.5	2661	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTATTTTTAATTTTTTT	NA	False	NA	NA	False	ATTAAA	-12	NA	22545697	22576865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_22547057_22552383_22552514_22556842_22557031_22561003_22561160_22568062_22568206_22568506_22568644_22569164_22569263_22573221_22573418_22576611
transcript_52874.nnic	chr16	-	758	3	Antisense	novelGene_ENSG00000122254.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCCCTGTTGTTTTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	22860280	22846976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_22847397_22850938_22851184_22860187
transcript_52876.nnic	chr16	-	805	3	Antisense	novelGene_ENSG00000122254.7_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTATCCCTGTTGTTTTGTA	NA	False	NA	NA	False	AATAAA	-13	NA	22860276	22846976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_22847397_22850938_22851235_22860187
transcript_52878.nnic	chr16	+	2612	13	NNC	ENSG00000168447.11	novel	1852	12	NA	NA	-558	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_10	7.22841614740048	21	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCAGCTGTGTTGTTTGTT	23301348	True	NA	7	True	AATAAA	-16	NA	23301743	23381294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23301932_23348591_23348911_23352800_23353075_23355298_23355490_23367855_23367960_23371298_23371463_23371775_23371884_23375737_23375856_23377164_23377241_23377328_23377387_23378705_23378768_23380093_23380170_23380420
transcript_52881.nnic	chr16	+	951	3	NNC	ENSG00000168447.11	novel	560	2	NA	NA	-558	0	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_2	4.5	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGACTCCTTTGGTATA	23301348	True	NA	10	True	AATAGA	-17	NA	23301743	23353244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23301932_23348591_23348911_23352800
transcript_52883.known	chr16	-	2935	17	FSM	ENSG00000168434.13	ENST00000307149.10	2935	17	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_10	12.5597011807606	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGACTGTTTCCTTCTTCT	-23451607	True	NA	-1	True	AATAAA	-20	NA	23453189	23388492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23389087_23392379_23392524_23393232_23393348_23398045_23398130_23403693_23403835_23406075_23406263_23410294_23410361_23413447_23413565_23416966_23417122_23418699_23418828_23424748_23424948_23433544_23433668_23434635_23434719_23442476_23442646_23445047_23445165_23445812_23445962_23452825
transcript_52886.known	chr16	+	730	3	FSM	ENSG00000260136.6	ENST00000570080.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	8.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATTGTTCAAAGGATCCT	23452458	True	NA	-7	True	NA	NA	NA	23452757	23457588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23453266_23455469_23455531_23457427
transcript_52888.known	chr16	+	438	2	FSM	ENSG00000260136.6	ENST00000562842.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATAGTCTTTTCTCAT	23452707	False	NA	11	True	CATAAA	-16	NA	23453006	23457606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23453266_23457427
transcript_52889.nnic	chr16	+	726	2	NNC	ENSG00000260136.6	novel	579	2	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	23452422	True	NA	10	True	AATAAA	-33	NA	23452721	23455789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23453128_23455469
transcript_52890.known	chr16	+	579	2	FSM	ENSG00000260136.6	ENST00000565747.5	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAATGGAATTTTCTTAA	23452707	False	NA	10	True	AATAAA	-33	NA	23453006	23455789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23453266_23455469
transcript_52891.known	chr16	-	5973	17	FSM	ENSG00000103365.15	ENST00000309859.8	5973	17	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_14	29.7352247973679	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCAGTGTCGTCTTTTTT	-23499638	True	NA	-5	True	AATAAA	-15	NA	23510494	23463541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23467701_23468885_23468997_23469995_23470166_23474903_23475062_23478367_23478502_23478882_23478912_23479764_23479888_23480644_23480771_23482922_23483005_23486014_23486153_23486709_23486791_23488605_23488710_23491676_23491801_23493359_23493459_23494302_23494379_23495693_23495779_23510320
transcript_52894.known	chr16	-	5196	9	FSM	ENSG00000103356.18	ENST00000449606.7	5196	9	0	0	0	0	multi-exon	TRUE	canonical	3	229	junction_6	10.2522863303753	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAAGTGTGCTGTGCTATC	-23551447	True	NA	-1	True	AATAAA	-37	NA	23557350	23520753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23524455_23525243_23525380_23529501_23529633_23529743_23529898_23532656_23532766_23534887_23535361_23544513_23544704_23552148_23552305_23557204
transcript_52897.nic	chr16	+	1012	6	ISM	ENSG00000103353.16	ENST00000395878.8	4745	7	384	3531	344	0	3prime_fragment	FALSE	canonical	3	535	junction_4	25.4133823014568	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACATGTTGTGTGGAATACT	23558099	False	NA	4	True	AATAAA	-12	NA	23558110	23570858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_23558280_23559467_23559677_23562205_23562272_23562624_23562731_23566986_23567070_23570479
transcript_52899.known	chr16	-	599	1	FSM	ENSG00000103356.18	ENST00000564759.1	599	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAATACATCGTGGCTTC	-23523635	False	NA	-30	True	AAGAAA	-28	NA	23523645	23523046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23523000_23523600
transcript_52908.known	chr16	-	843	6	FSM	ENSG00000004779.10	ENST00000484769.1	843	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2081.12502267403	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAATCTATAAAACCAAC	-23572494	True	NA	10	True	TTTAAA	-24	NA	23596303	23581032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23595428_23595639_23596122
transcript_52919.known	chr16	-	503	4	FSM	ENSG00000004779.10	ENST00000562133.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	1925.93013603528	842	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572468	True	NA	-25	True	AATAAA	-14	NA	23596277	23581013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23596122
transcript_52921.known	chr16	-	665	5	FSM	ENSG00000004779.10	ENST00000007516.8	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	4011	junction_2	148.150261559	35070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCCCCCATCTTCAGT	-23572507	True	NA	-25	True	AATAAA	-14	NA	23596316	23581013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23581174_23582275_23582376_23585335_23585424_23587196_23587320_23596122
transcript_52922.known	chr16	-	4008	13	FSM	ENSG00000083093.10	ENST00000261584.9	4008	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	35.8817502360183	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCTTGGCATGTTATTG	-23638857	True	NA	-5	True	AATAAA	-17	NA	23641310	23603164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_23603670_23607863_23608013_23614003_23614092_23621361_23621479_23622968_23623131_23624008_23624095_23626235_23626398_23629203_23629276_23629639_23630470_23634861_23636335_23637849_23637953_23638069_23638130_23641109
transcript_52925.nnic	chr16	+	1575	7	NNC	ENSG00000166847.10	novel	10954	6	NA	NA	-102	-12	at_least_one_novel_splicesite	TRUE	canonical	3	15	junction_6	119.007586126077	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGTCTGGAACTGCTT	23633804	True	NA	26	True	AATAAA	-18	NA	23641363	23669860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046_23667574_23669442
transcript_52927.known	chr16	+	878	6	FSM	ENSG00000166847.10	ENST00000563998.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_5	131.825035558501	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTATGAACAGTCACTTTG	23633911	True	NA	100	True	NA	NA	NA	23641470	23667371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667016
transcript_52930.known	chr16	+	10954	6	FSM	ENSG00000166847.10	ENST00000300087.7	10954	6	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_5	22.3571017799714	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATTTTTCAAAGTCTTC	23633906	True	NA	19	True	AATAAA	-31	NA	23641465	23677472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23641591_23642954_23643024_23658506_23658626_23661169_23661282_23665625_23665729_23667046
transcript_52938.known	chr16	+	523	3	FSM	ENSG00000166847.10	ENST00000568272.1	523	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	166.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGGTTTGCAAGTATAGT	23633969	True	NA	NA	False	AATAAA	-29	NA	23641528	23651147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23641591_23642954_23643024_23650755
transcript_52940.known	chr16	+	3405	1	FSM	ENSG00000166847.10	ENST00000563614.1	3405	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	225	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTGCTTCCTTTTTGTTTT	23666454	False	NA	38	True	AATAAA	-30	NA	23666467	23669872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23666500_23669900
transcript_52944.known	chr16	+	2160	10	FSM	ENSG00000166851.15	ENST00000300093.9	2160	10	0	0	0	0	multi-exon	TRUE	canonical	3	1840	junction_4	147.424640719786	2158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTGTATTTCCTGAG	23656622	True	NA	61	True	ATTAAA	-16	NA	23678888	23690367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23679341_23680083_23680253_23680913_23681059_23682063_23682158_23683869_23684090_23687468_23687625_23688667_23688746_23689237_23689393_23689493_23689677_23689859
transcript_52954.known	chr16	+	1967	7	FSM	ENSG00000166869.3	ENST00000300113.3	1967	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	4.42216638714053	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGAGTGTGAATGCATTCG	23754759	False	NA	8	True	AATAAA	-15	NA	23755025	23758935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_23755117_23755660_23755734_23755846_23755928_23756062_23756194_23756387_23756450_23757200_23757324_23757529
transcript_52958.nnic	chr16	+	1124	9	NNC	ENSG00000122257.20	novel	3384	11	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	51.1315704824329	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	NA	False	NA	34	True	AATAAA	-36	NA	24539503	24559805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_24539638_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_52959.nic	chr16	+	1241	9	NIC	ENSG00000122257.20	novel	3384	11	NA	NA	-47	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	52.1019133525824	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	NA	False	NA	34	True	AATAAA	-36	NA	24539508	24559805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_24539760_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_52960.nnic	chr16	+	1302	9	NNC	ENSG00000122257.20	novel	3384	11	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	52.1019133525824	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTAAGTAGTGAGAAGTCT	24535009	True	NA	34	True	AATAAA	-36	NA	24539551	24559805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_24539864_24540611_24540793_24546162_24546263_24548944_24548982_24553512_24553558_24555614_24555704_24555820_24555918_24556307_24556448_24559504
transcript_52964.known	chr16	+	454	3	FSM	ENSG00000090905.19	ENST00000566108.2	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GACGACAAGAAAAAGAAGGA	24610050	True	NA	NA	False	AAAAAG	-7	NA	24610208	24750777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24610485_24640883_24641010_24750725
transcript_52965.known	chr16	+	8491	25	FSM	ENSG00000090905.19	ENST00000395799.8	8491	25	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	81.6190230923867	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTAAAGTGGTTTGGAT	24723188	True	NA	39	True	AATAAA	-16	NA	24729650	24826218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_24729847_24730252_24730301_24750725_24750814_24758338_24758361_24776932_24777359_24789231_24791818_24793472_24793650_24794543_24794720_24795906_24795940_24797489_24797571_24797914_24797967_24804176_24804320_24804704_24804852_24805013_24805152_24805604_24805734_24806205_24806284_24806573_24806785_24809349_24809482_24815146_24815306_24816815_24816957_24818592_24818701_24820138_24820361_24822076_24822148_24822873_24823014_24823431
transcript_52967.nic	chr16	+	437	2	ISM	ENSG00000090905.19	ENST00000562829.1	277	3	-44	46516	18	-20266	5prime_fragment	FALSE	canonical	3	161	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCGCAAAGCAATTCTTGT	24723206	True	NA	NA	False	TTTAAA	-13	NA	24729668	24730511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_24729847_24730252
transcript_52968.known	chr16	-	1292	3	FSM	ENSG00000140750.17	ENST00000571843.1	1292	3	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	3.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAACTTCATAATTCTTG	-24931137	False	NA	-25	True	ATTAAA	-19	NA	24931160	24919394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_24920261_24927683_24927733_24930783
transcript_52969.known	chr16	-	3495	20	FSM	ENSG00000140750.17	ENST00000289968.11	3495	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	119.884986434078	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCATAATTCTTGGAGGTA	-25009971	True	NA	-19	True	ATTAAA	-25	NA	25015369	24919388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_24920261_24930783_24931405_24935469_24935640_24939363_24939598_24941986_24942144_24943770_24943863_24947481_24947596_24949403_24949485_24952288_24952371_24952930_24953043_24954602_24954731_24959670_24959753_24959910_24959980_24964196_24964309_24968350_24968428_24968660_24968773_24970506_24970581_24977214_24977320_24978965_24979006_25015208
transcript_52971.known	chr16	+	1032	1	FSM	ENSG00000262587.3	ENST00000619106.1	1032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	127	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCGCGGTGTCATTAGAGT	25031492	True	NA	11	True	ATTAAA	-24	NA	25031743	25032775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25031700_25032800
transcript_52973.nic	chr16	-	653	3	FSM	ENSG00000260448.7	ENST00000566507.2	618	3	-37	2	-21	-2	multi-exon	FALSE	canonical	1	2	junction_1	4	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATGTGTTTCAGCTTGTC	-25111502	True	NA	NA	False	AATAAA	-23	NA	25111576	25085591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25085773_25103350_25103642_25111395
transcript_52974.known	chr16	-	1991	3	FSM	ENSG00000260448.7	ENST00000563962.6	1991	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGAGACACTGCGCCCAGC	-25111465	True	NA	NA	False	NA	NA	NA	25111539	25085167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25086724_25103350_25103642_25111395
transcript_52975.known	chr16	-	432	3	FSM	ENSG00000260448.7	ENST00000563176.2	561	3	41	88	41	-88	multi-exon	FALSE	canonical	1	2	junction_1	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCCTGAGCAACAGAGGGA	-25111340	False	NA	NA	False	NA	NA	NA	25111414	25100563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25100686_25103350_25103642_25111395
transcript_52976.known	chr16	-	534	1	FSM	ENSG00000275494.1	ENST00000613406.1	534	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCGGATTTGCTTAGTGAAT	-25106926	True	NA	0	True	AATAAA	-18	NA	25107102	25106568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_25106600_25107100
transcript_52980.known	chr16	+	1529	12	FSM	ENSG00000205629.12	ENST00000380962.9	1529	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	294.230078073224	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTGGTTGGACCTCTGC	25103826	True	NA	31	True	AATAAA	-19	NA	25111730	25178231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25111997_25125963_25126127_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_52982.nic	chr16	+	1162	11	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	267.088842896891	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103803	True	NA	28	True	AATAAA	-16	NA	25111707	25178228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_25111769_25128474_25128571_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_52989.nnic	chr16	+	1294	10	NIC	ENSG00000205629.12	novel	1352	11	NA	NA	-23	0	combination_of_known_splicesites	FALSE	canonical	1	78	junction_1	218.601333961796	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103803	True	NA	28	True	AATAAA	-16	NA	25111707	25178228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_25111997_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_53.known	ERCC-00109	+	520	1	FSM	ERCC-00109A	DQ854998	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00109_+_0_500
transcript_53008.known	chr16	+	1352	11	FSM	ENSG00000205629.12	ENST00000399069.8	1352	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	226.314029613721	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCGCCTGTGGTTGGACCTC	25103837	True	NA	28	True	AATAAA	-16	NA	25111741	25178228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25111997_25128474_25128567_25132401_25132524_25140170_25140248_25151553_25151616_25161101_25161205_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_53009.known	chr16	+	1168	9	FSM	ENSG00000205629.12	ENST00000564011.5	1168	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	268.429692843396	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTTGTTTAAATAAATCTCA	25103830	True	NA	-2	True	NA	NA	NA	25111734	25178198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25111997_25128474_25128571_25132401_25132524_25140170_25140248_25164597_25164719_25169111_25169214_25170713_25170806_25174936_25175035_25178000
transcript_53010.known	chr16	+	449	4	FSM	ENSG00000205629.12	ENST00000575396.1	449	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	302.05628614548	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTCGCCTGTGGTTGGACC	25164677	True	NA	26	True	AATAAA	-14	NA	25164689	25178226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_25164719_25169111_25169214_25170713_25170806_25178000
transcript_53014.nnic	chr16	-	445	2	NNC	ENSG00000236481.1	novel	294	2	NA	NA	-4562	-4	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	38	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGATTTCTGAATTACTT	-26599211	True	NA	-2	True	AATAAA	-18	NA	26599375	26584758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_26584945_26599116
transcript_53015.known	chr16	+	2431	8	FSM	ENSG00000155666.12	ENST00000286096.9	2431	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4.58034844053754	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCTGGTCTTGAACT	27202901	True	NA	24	True	AATAGA	-20	NA	27203525	27221768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27203637_27210092_27210622_27213584_27213752_27214875_27215009_27215944_27215990_27218960_27219111_27220392_27220486_27220565
transcript_53023.known	chr16	+	2594	2	FSM	ENSG00000245888.7	ENST00000499939.2	2594	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGTAGAAAGAAAAGA	27268808	True	NA	NA	False	AATAGA	-44	NA	27268868	27271976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27269157_27269670
transcript_53024.known	chr16	-	1042	8	FSM	ENSG00000169189.17	ENST00000361439.9	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_7	37.2766819930122	2807	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTCTGTGTTCTCGAGC	-27267309	True	NA	-3	True	AATAAA	-22	NA	27268772	27224993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27225237_27225725_27225847_27226719_27226837_27233000_27233148_27234187_27234266_27235177_27235300_27257434_27257582_27268705
transcript_53027.known	chr16	+	3624	11	FSM	ENSG00000077238.14	ENST00000395762.7	3624	11	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	20.4355083127384	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311934	True	NA	29	True	AATAAA	-18	NA	27313973	27364778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27314021_27330065_27330199_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_53028.known	chr16	+	3539	10	FSM	ENSG00000077238.14	ENST00000543915.6	3539	10	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	22.432339970302	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTTATGTATTAACCAAA	27311886	True	NA	29	True	AATAAA	-18	NA	27313925	27364778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27314021_27340185_27340274_27342120_27342260_27344868_27345021_27346466_27346619_27352539_27352697_27355807_27355908_27358915_27358995_27360765_27360816_27362251
transcript_53032.known	chr16	+	2953	9	FSM	ENSG00000103522.16	ENST00000395754.4	2953	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	1.76334199745824	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGAGGTCAAGTTGTTTGT	27427171	True	NA	16	True	AATAAA	-33	NA	27427243	27450485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27427362_27430055_27430121_27434346_27434450_27437487_27437688_27442961_27443117_27444541_27444720_27445176_27445277_27446006_27446089_27448533
transcript_53037.nic	chr16	+	716	5	ISM	ENSG00000047578.14	ENST00000261588.10	6599	28	-45	148946	-34	144	5prime_fragment	FALSE	canonical	3	19	junction_1	6.98212002188447	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGCAGCACGTA	27548849	True	NA	NA	False	AATAAA	-13	NA	27550098	27631398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064
transcript_53040.known	chr16	+	6624	28	FSM	ENSG00000047578.14	ENST00000261588.10	6599	28	0	-25	0	25	multi-exon	TRUE	canonical	3	11	junction_6	9.31936049896877	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTCCGAGTCACCGGATTT	27548894	True	NA	NA	False	AATAAA	-18	NA	27550143	27780369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_27550178_27573900_27573957_27618424_27618502_27628660_27628831_27631064_27631163_27648603_27648736_27677728_27677997_27681398_27681531_27698327_27698501_27699533_27699600_27701588_27701696_27703895_27703999_27708704_27708921_27721557_27721696_27740040_27740921_27749583_27750307_27751718_27751925_27754172_27754252_27761412_27761591_27766308_27766475_27769860_27770019_27771587_27771653_27773098_27773210_27774944_27775085_27776927_27777030_27777609_27777771_27777880_27777970_27778573
transcript_53042.known	chr16	-	1173	6	FSM	ENSG00000169181.13	ENST00000380897.7	1173	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.8	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTGCGGTGTATGGAGG	-27888139	True	NA	NA	False	AATAAA	-17	NA	27888157	27790893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_27791468_27807486_27807555_27828788_27828957_27844949_27845062_27884485_27884639_27888059
transcript_53043.known	chr16	-	4537	24	FSM	ENSG00000169180.12	ENST00000304658.10	4537	24	0	0	0	0	multi-exon	TRUE	canonical	3	146	junction_21	93.1873329214504	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTGGGGAGCTGCTT	-28206554	True	NA	0	True	AATAAA	-25	NA	28211965	28097975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28098640_28101457_28101689_28101846_28101946_28104545_28104708_28106042_28106215_28106382_28106498_28107521_28107678_28111816_28112007_28112903_28113051_28117317_28117463_28121669_28121763_28125688_28125849_28132333_28132404_28133840_28133934_28135215_28135325_28146093_28146204_28152658_28152786_28156073_28156528_28166507_28166586_28169749_28169910_28175897_28176096_28177219_28177333_28180940_28181032_28211365
transcript_53046.known	chr16	-	1329	7	FSM	ENSG00000198156.10	ENST00000533640.5	1329	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	6.14862224856557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	-28356580	True	NA	NA	False	AAAAAG	-41	NA	28356654	28342554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28343189_28344547_28344584_28344692_28344754_28348833_28349030_28349141_28349242_28352878_28353062_28356535
transcript_53053.nic	chr16	-	418	2	ISM	ENSG00000198156.10	ENST00000533640.5	1329	7	-49	10257	-49	-10257	5prime_fragment	FALSE	canonical	3	20	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28356703	28352811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_28353062_28356535
transcript_53054.known	chr16	-	2913	21	FSM	ENSG00000205609.13	ENST00000380876.5	2913	21	0	0	0	0	multi-exon	TRUE	canonical	3	2016	junction_13	408.871018782207	634	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	-28403679	True	NA	NA	False	ACTAAA	-16	NA	28403841	28379714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28379881_28379975_28380139_28380291_28380380_28380467_28380534_28380631_28380792_28383117_28383482_28388057_28388283_28388507_28388699_28390290_28390385_28390519_28390646_28390839_28390982_28391751_28391856_28391979_28392143_28399870_28399999_28400376_28400487_28400614_28400670_28400858_28400985_28401206_28401397_28401538_28401605_28403517_28403649_28403786
transcript_53061.known	chr16	-	1876	15	FSM	ENSG00000188603.22	ENST00000359984.12	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_13	30.53143244833	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCGTTTTTGTCTCTAAAA	-28490849	True	NA	0	True	AATAAA	-27	NA	28492074	28477271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_53063.known	chr16	-	1536	14	FSM	ENSG00000188603.22	ENST00000636172.1	1536	14	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_10	55.5647710962823	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	-28490833	True	NA	NA	False	GGGGCT	-44	NA	28492058	28477515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_53064.known	chr16	-	1173	14	FSM	ENSG00000188603.22	ENST00000355477.10	1173	14	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	56.8143452174291	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTCGGGATCCTCAGGACG	-28491740	False	1225	NA	False	GGGGCT	-44	NA	28491759	28477515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_53065.known	chr16	-	1957	14	FSM	ENSG00000188603.22	ENST00000561689.6	1957	14	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	31.6401736992068	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCCATGGACTTCTTATAT	-28490819	True	NA	-17	True	AATAAA	-10	NA	28492044	28477288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_53071.known	chr16	-	1168	13	FSM	ENSG00000188603.22	ENST00000568422.6	1168	13	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_7	57.5839966194312	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATACTCGGGATCCTCA	-28491813	False	NA	NA	False	GGGGCT	-39	NA	28491832	28477520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_53073.nic	chr16	-	1587	12	NIC	ENSG00000188603.22	novel	1841	15	NA	NA	1	0	intron_retention	FALSE	canonical	3	9	junction_10	57.7231924112723	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-28490816	True	NA	-7	True	AATAAA	-20	NA	28492041	28477278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28491481_28491561_28491713
transcript_53074.known	chr16	-	1469	12	FSM	ENSG00000188603.22	ENST00000357806.11	1469	12	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	75.5301920913443	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-28490758	True	NA	-19	True	AATAAA	-8	NA	28491983	28477290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491481_28491561_28491713
transcript_53084.known	chr16	-	1406	7	FSM	ENSG00000233232.7	ENST00000452313.5	1406	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.45905169363301	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAACTAACGAAGAATAAAT	-28470535	False	NA	NA	False	AAAAAG	-41	NA	28470547	28456371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28457027_28458385_28458422_28458530_28458592_28462673_28462870_28462981_28463082_28466719_28466903_28470372
transcript_53091.known	chr16	-	1685	16	FSM	ENSG00000188603.22	ENST00000636147.2	1685	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_15	44.538921805041	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTATATCGTTTTTGTC	-28490849	True	NA	-7	True	AATAAA	-20	NA	28492074	28477278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491481_28491561_28491713_28491836_28492019
transcript_53092.known	chr16	-	1720	14	FSM	ENSG00000188603.22	ENST00000357857.14	1720	14	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_13	47.7914602061817	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTCTTATATCGTTTTTGT	-28490780	True	NA	-8	True	AATAAA	-19	NA	28492005	28477279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28486346_28486491_28486577_28486651_28487455_28487542_28487661_28487742_28488590_28488663_28489289_28489387_28491713
transcript_53093.known	chr16	-	1430	11	FSM	ENSG00000188603.22	ENST00000395653.9	1430	11	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	86.5230605099011	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATCCATGGACTTCTTAT	-28490798	True	NA	-19	True	AATAAA	-8	NA	28492023	28477290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28477636_28477736_28477878_28482104_28482199_28482326_28482383_28482476_28482546_28482625_28482673_28484005_28484119_28487455_28487542_28488590_28488663_28489289_28489387_28491713
transcript_53094.nic	chr16	+	1272	11	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	-26	0	combination_of_known_junctions	TRUE	canonical	1	3	junction_4	43.7447139663754	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552533	True	NA	5	True	ATTAAA	-16	NA	28553888	28591790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28588609_28588692_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_53100.known	chr16	+	1159	10	FSM	ENSG00000176476.9	ENST00000317058.8	1159	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	9.76134983582107	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552564	True	NA	5	True	ATTAAA	-16	NA	28553919	28591790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590226_28590295_28590443_28590630_28590667_28590772_28590936_28591589
transcript_53105.nic	chr16	+	1260	9	NIC	ENSG00000176476.9	novel	1159	10	NA	NA	-26	0	intron_retention	FALSE	canonical	3	92	junction_1	10.3531396204243	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGTCTCCTGGGTTTTACT	28552533	True	NA	5	True	ATTAAA	-16	NA	28553888	28591790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28554098_28581054_28581145_28584912_28584989_28585647_28585721_28589099_28589165_28590095_28590443_28590630_28590667_28590772_28590936_28591589
transcript_53111.known	chr16	-	1031	8	FSM	ENSG00000197165.11	ENST00000335715.9	1031	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	5.55492059863531	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAGTCTCTATTCCAAG	-28596979	True	NA	0	True	AATAAA	-18	NA	28597050	28591942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28592141_28592262_28592444_28593251_28593347_28593441_28593569_28595366_28595465_28595549_28595676_28595782_28595935_28596996
transcript_53112.known	chr16	-	1162	8	FSM	ENSG00000196502.13	ENST00000314752.12	1569	8	37	370	-17	0	multi-exon	FALSE	canonical	3	16	junction_2	13.2541868625637	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAATAAAATAAAATAA	-28609761	True	NA	-24	True	NA	NA	NA	28610007	28605627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28605934_28606055_28606237_28606760_28606856_28606950_28607078_28608290_28608389_28608477_28608604_28608707_28608860_28609930
transcript_53124.known	chr16	-	5291	3	FSM	ENSG00000176046.9	ENST00000324873.8	5291	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGTCAATTACTCCTC	-28538943	True	NA	NA	False	AATGAA	-21	NA	28538974	28532707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28537670_28538005_28538156_28538795
transcript_53128.known	chr16	-	432	1	FSM	ENSG00000275441.1	ENST00000613454.1	432	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	92	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACAGATTGCTGCTTGCTGG	-28553941	True	NA	1	True	AATAAA	-28	NA	28554140	28553708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28553700_28554100
transcript_53135.known	chr16	+	2910	21	FSM	ENSG00000184110.15	ENST00000331666.11	2910	21	0	0	0	0	multi-exon	FALSE	canonical	3	2240	junction_1	321.704041006637	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	28709627	True	NA	NA	False	ACTAAA	-16	NA	28711463	28735596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_53141.known	chr16	+	3137	21	FSM	ENSG00000184110.15	ENST00000395587.5	3137	21	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_1	651.676336458521	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGAGCCTGCTGCTTTTTG	NA	False	NA	NA	False	NA	NA	NA	28711416	28735727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711568_28711656_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_53154.known	chr16	+	2870	21	FSM	ENSG00000184110.15	ENST00000564243.5	2870	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	694.629287821929	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGGTTGATTGCTTGTT	28709637	True	NA	NA	False	ACTAAA	-16	NA	28711473	28735596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711519_28711656_28711788_28713700_28713767_28713908_28714099_28714350_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_53155.known	chr16	+	2986	20	FSM	ENSG00000184110.15	ENST00000566866.5	2986	20	0	0	0	0	multi-exon	FALSE	canonical	3	2418	junction_7	300.301667349255	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGTTGATTGCTTGTTG	28709690	True	NA	NA	False	ACTAAA	-17	NA	28711526	28735597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28711788_28713700_28713767_28713908_28714099_28714320_28714447_28714635_28714691_28714818_28714929_28715306_28715435_28723163_28723324_28723447_28723552_28724321_28724464_28724657_28724784_28724918_28725013_28726604_28726796_28727020_28727246_28731828_28732193_28734519_28734680_28734777_28734844_28734931_28735020_28735172_28735336_28735430
transcript_53156.known	chr16	+	424	3	FSM	ENSG00000184110.15	ENST00000566086.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	3270	junction_1	118.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTTGTTCTGGTTGATTG	NA	False	NA	NA	False	ACTAAA	-10	NA	28734918	28735590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28735020_28735172_28735336_28735430
transcript_53160.nnic	chr16	+	594	3	NNC	ENSG00000196993.8	novel	2037	7	NA	NA	6434	-10307	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28758220	28762500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_28758477_28758681_28758770_28762250
transcript_53161.nnic	chr16	+	741	2	NNC	ENSG00000196993.8	novel	2037	7	NA	NA	6492	-10307	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	28758278	28762500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_28758770_28762250
transcript_53162.known	chr16	+	1963	2	FSM	ENSG00000251417.2	ENST00000507031.2	1963	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTTTGTGTGTGAG	NA	False	NA	NA	False	NA	NA	NA	28802742	28817828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28803013_28816135
transcript_53166.known	chr16	+	1294	9	FSM	ENSG00000168488.19	ENST00000568266.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	121.794909581641	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCCGTGGTATCAATGG	28822214	False	NA	NA	False	NA	NA	NA	28824137	28830768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28824543_28825365_28825403_28825623_28825681_28825769_28825842_28826239_28826391_28826861_28826987_28829400_28829493_28829857_28830059_28830614
transcript_53170.known	chr16	+	603	2	FSM	ENSG00000168488.19	ENST00000564284.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	3	548	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	28829765	False	NA	NA	False	NA	NA	NA	28829777	28830936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28830059_28830614
transcript_53175.known	chr16	-	2011	10	FSM	ENSG00000178952.11	ENST00000313511.8	2011	10	0	0	0	0	multi-exon	TRUE	canonical	3	1525	junction_5	125.839403827083	2891	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATTTCTCAGTGAAGTT	-28813612	True	NA	-11	True	AATAAA	-16	NA	28846348	28842410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28843149_28843735_28843856_28843949_28844102_28844229_28844335_28844418_28844552_28844697_28844863_28844950_28845056_28845313_28845481_28845911_28846107_28846217
transcript_53180.known	chr16	+	1532	9	FSM	ENSG00000178188.15	ENST00000538342.5	1532	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	44.2210357183095	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCCCACCCGCTCCACCCT	28863705	True	NA	NA	False	NA	NA	NA	28863805	28873823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28863946_28867373_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_53185.known	chr16	+	6043	9	FSM	ENSG00000178188.15	ENST00000337120.9	6043	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	22.1401784093986	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTATCGTGATGGCTATG	NA	False	NA	17	True	AATAAA	-18	NA	28862803	28874201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28867034_28867330_28867433_28869005_28869098_28869207_28869384_28871779_28871984_28872189_28872402_28872533_28872706_28873169_28873270_28873446
transcript_53190.known	chr16	-	2307	13	FSM	ENSG00000177548.13	ENST00000358201.9	2307	13	0	0	0	0	multi-exon	TRUE	canonical	3	66	junction_4	10.8892786211433	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGTCGCCTTGTCCCTGC	-28924591	True	NA	-6	True	AATAAA	-17	NA	28925238	28904420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28905045_28905396_28905514_28905703_28905760_28905866_28905879_28906018_28906197_28908608_28908765_28910887_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_53199.known	chr16	-	2211	7	FSM	ENSG00000177548.13	ENST00000562590.5	2211	7	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_6	9.72539630726344	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCAAATCAGATACTGACAA	-28925460	True	NA	NA	False	AAGAAA	-14	NA	28925684	28910286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28910987_28911083_28911180_28914235_28914587_28914671_28914783_28919785_28919944_28924402_28924616_28925102
transcript_53205.nnic	chr16	-	501	3	NIC	ENSG00000260442.6	novel	437	3	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	53.5	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878214	True	NA	-7	True	ATTAAA	-19	NA	28879949	28878956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_28879108_28879488_28879756_28879866
transcript_53207.nnic	chr16	-	448	3	FSM	ENSG00000260442.6	ENST00000686287.1	437	3	-11	0	-11	0	multi-exon	FALSE	canonical	3	50	junction_1	28.5	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878214	True	NA	-7	True	ATTAAA	-19	NA	28879949	28878956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28879108_28879541_28879756_28879866
transcript_53209.known	chr16	-	583	3	FSM	ENSG00000177548.13	ENST00000570030.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	14	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGATTCTAGGAATAGCA	-28924569	True	NA	NA	False	NA	NA	NA	28925216	28919687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28919944_28924402_28924616_28925102
transcript_53210.known	chr16	-	558	2	FSM	ENSG00000260442.6	ENST00000561547.5	558	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878160	True	NA	-7	True	ATTAAA	-19	NA	28879895	28878956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28879108_28879488
transcript_53211.known	chr16	-	530	2	FSM	ENSG00000260442.6	ENST00000566956.2	546	2	16	0	16	0	multi-exon	FALSE	canonical	3	50	junction_1	0	1085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCGGGACTCTGTTTTCTC	-28878185	True	NA	-7	True	ATTAAA	-19	NA	28879920	28878956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28879108_28879541
transcript_53214.known	chr16	-	557	2	FSM	ENSG00000177548.13	ENST00000564579.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCAGCAGTGATTCTAGG	-28924062	True	NA	NA	False	NA	NA	NA	28924710	28919694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_28919944_28924402
transcript_53217.known	chr16	+	4569	8	FSM	ENSG00000176953.13	ENST00000320805.9	4564	8	0	-5	0	5	multi-exon	FALSE	canonical	3	186	junction_3	20.4759689910502	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACTGGAGGATTTTTGT	28950904	False	NA	8	True	AATAAA	-21	NA	28950936	28967097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28951399_28952131_28952205_28954564_28954683_28955977_28956059_28956150_28956338_28958716_28958862_28958990_28959101_28963704
transcript_53221.known	chr16	+	2102	13	FSM	ENSG00000169682.18	ENST00000323081.12	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	150.148445065394	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970145	True	NA	13	True	AATAAA	-14	NA	28974793	28984543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53222.nnic	chr16	+	1883	13	NIC	ENSG00000169682.18	novel	1979	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	162.854655717572	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970124	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28974864_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53223.nic	chr16	+	2124	13	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	153.940171459203	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970124	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53225.known	chr16	+	1979	13	FSM	ENSG00000169682.18	ENST00000565975.5	1979	13	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	136.421808088818	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCCTGCTCTCGTCTTTC	28970123	True	NA	18	True	AATAAA	-19	NA	28974771	28984548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28974864_28975100_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53226.nic	chr16	+	2006	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	68	junction_1	204.391497615534	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28974690	False	NA	10	True	AATAAA	-11	NA	28974730	28984540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975187_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53229.nic	chr16	+	1968	12	NIC	ENSG00000169682.18	novel	2102	13	NA	NA	1	0	combination_of_known_splicesites	FALSE	canonical	3	53	junction_1	207.229700478311	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGACCCCAGGTGCCTGCTCT	28970124	True	NA	10	True	AATAAA	-11	NA	28974772	28984540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_28975101_28975183_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53231.known	chr16	+	2205	12	FSM	ENSG00000169682.18	ENST00000311008.16	2205	12	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_6	64.2088534355203	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGGTGCCTGCTCTCGT	28970129	True	NA	13	True	AATAAA	-14	NA	28974777	28984543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28981900_28982057_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53236.known	chr16	+	2027	11	FSM	ENSG00000169682.18	ENST00000334536.12	2027	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	162.500492306947	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGGTGCCTGCTCTCGTC	28970152	True	NA	14	True	AATAAA	-15	NA	28974800	28984544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_28975393_28975491_28975558_28977907_28978045_28979154_28979307_28979404_28979472_28981469_28981616_28982355_28982546_28982856_28982923_28983191_28983291_28983785_28983958_28984204
transcript_53246.nic	chr16	+	413	2	ISM	ENSG00000196796.5	ENST00000424293.4	1354	8	-97	10275	-97	-10275	5prime_fragment	FALSE	canonical	2	17	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCACGTTTCTGGACTTCAT	NA	False	NA	NA	False	AATAAA	-14	NA	29038557	29042451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_29038721_29042201
transcript_53248.nnic	chr16	-	810	2	NNC	ENSG00000260908.1	novel	121	2	NA	NA	0	1978	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAACTATAGGTGTCTTTA	NA	False	NA	NA	False	AATAAA	-28	NA	29107711	29101678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_29102132_29107354
transcript_53249.known	chr16	-	1840	2	FSM	ENSG00000260908.1	ENST00000562618.1	1840	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	NA	False	NA	NA	False	NA	NA	NA	29107711	29103656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29105140_29107354
transcript_53251.known	chr16	+	1356	8	FSM	ENSG00000213648.11	ENST00000360423.12	1356	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.3986415871984	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTCATGTAGAGCCT	NA	False	NA	NA	False	AATAAA	-19	NA	29459912	29464966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29459986_29461381_29461534_29461637_29461764_29461852_29461951_29463344_29463472_29463566_29463662_29464159_29464341_29464462
transcript_53254.known	chr16	+	762	5	FSM	ENSG00000181625.17	ENST00000351581.4	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	237.075278129121	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	29454561	29458219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29454931_29455397_29455450_29457631_29457760_29457927_29458016_29458094
transcript_53265.known	chr16	-	937	5	FSM	ENSG00000261740.7	ENST00000569622.6	937	5	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_3	1062.21066648759	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAAATCTTGATAAGTTTTT	NA	False	NA	NA	False	NA	NA	NA	29454347	29443229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29446923_29454015_29454114_29454190
transcript_53266.known	chr16	-	1012	3	FSM	ENSG00000183336.9	ENST00000330978.4	399	3	-613	0	-613	0	multi-exon	FALSE	canonical	3	2524	junction_1	158.5	13134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	29454964	29453592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29453733_29454015_29454114_29454190
transcript_53267.known	chr16	-	3103	6	FSM	ENSG00000261740.7	ENST00000565417.6	3103	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1063.36097351746	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTTCTTCTTTTTCCTTGA	NA	False	NA	NA	False	AATAAA	-35	NA	29454356	29443248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29443689_29444397_29444500_29446801_29447027_29450111_29450277_29452108_29454114_29454190
transcript_53268.known	chr16	+	1165	6	FSM	ENSG00000181625.17	ENST00000330181.9	1165	6	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_2	61.9096115316515	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	29454500	29458219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29454931_29455397_29455450_29455543_29455886_29457631_29457760_29457927_29458016_29458094
transcript_53269.known	chr16	-	397	3	FSM	ENSG00000258150.6	ENST00000549858.1	397	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGACACCAGCCCCGG	NA	False	NA	NA	False	NA	NA	NA	29466695	29465394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29465542_29465611_29465742_29466575
transcript_53270.known	chr16	+	418	1	FSM	ENSG00000279228.2	ENST00000624430.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	NA	False	NA	NA	False	AATAAA	-15	NA	29467160	29467578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29467200_29467600
transcript_53292.known	chr16	+	1853	3	FSM	ENSG00000197471.12	ENST00000563039.2	1853	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTCAAAAAGGTGTTC	29663026	True	NA	20	True	AATAAA	-29	NA	29663254	29670876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29663317_29663694_29665082_29670472
transcript_53294.known	chr16	+	7252	2	FSM	ENSG00000197471.12	ENST00000652691.1	7252	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGGTCAAAAAGGTGTTC	29663018	True	NA	20	True	AATAAA	-29	NA	29663246	29670876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29663317_29663694
transcript_53296.known	chr16	+	2200	4	FSM	ENSG00000103485.19	ENST00000395384.9	2200	4	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	116.121583791396	1024	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGCCTGAGGAGTTTT	29667779	True	NA	17	True	AATAAA	-17	NA	29679179	29698699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29679211_29694663_29695200_29696995_29697128_29697198
transcript_53308.known	chr16	+	2081	14	FSM	ENSG00000079616.14	ENST00000160827.9	2081	14	0	0	0	0	multi-exon	TRUE	canonical	3	1578	junction_8	90.1627719393486	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770461	True	NA	24	True	AATACA	-15	NA	29790750	29805384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29790830_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_5331.known	chr1	+	1887	8	FSM	ENSG00000132773.12	ENST00000372090.6	1887	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	14.1911153579287	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGACCAGCTTCATCTTTG	45339032	True	NA	27	True	NA	NA	NA	45340169	45343973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45340305_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342842_45343003_45343081
transcript_53328.known	chr16	+	2493	14	FSM	ENSG00000079616.14	ENST00000400751.9	2493	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	464.071701764607	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCCGCCTGATTTTTGGG	29770681	False	NA	24	True	AATACA	-15	NA	29790970	29805384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29791462_29796892_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804066_29804813_29805027_29805114_29805175_29805262
transcript_53329.known	chr16	+	2020	13	ISM	ENSG00000079616.14	ENST00000569382.3	2102	14	6145	0	-60	0	3prime_fragment	FALSE	canonical	1	2	junction_10	482.167502015638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTGTTGTGTAAATACAGTT	29776596	False	NA	-7	True	NA	NA	NA	29796885	29805353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_29797089_29798373_29798502_29798592_29798748_29798974_29799185_29799263_29799495_29799627_29799782_29799912_29800049_29802768_29802938_29803448_29803609_29803997_29804108_29804813_29805027_29805114_29805175_29805262
transcript_5333.known	chr1	+	2173	8	FSM	ENSG00000132773.12	ENST00000495703.5	2173	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	37.1977616179758	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAAAATATTTGACCAGCT	45339083	True	NA	18	True	NA	NA	NA	45340220	45343964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45340543_45341072_45341216_45341302_45341344_45341472_45341570_45341948_45342108_45342383_45342644_45342734_45343003_45343081
transcript_53332.known	chr16	+	2698	6	FSM	ENSG00000103495.15	ENST00000219782.10	2698	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	410.895899225096	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCTGGATTGAAT	29799488	False	NA	11	True	AATAAA	-18	NA	29806595	29811164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29809539_29809765_29810076
transcript_53333.known	chr16	+	599	5	FSM	ENSG00000103495.15	ENST00000568411.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	435.229249936169	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCTGGCTCTGGATTGAA	29807554	False	NA	10	True	AATAAA	-17	NA	29807774	29811163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29807829_29808229_29808294_29808569_29808742_29810076_29810228_29811005
transcript_53336.known	chr16	+	672	4	FSM	ENSG00000103495.15	ENST00000561855.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	446.534059917792	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGAGTCCCTTGGTACAA	29799540	False	NA	NA	False	NA	NA	NA	29806647	29810266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29806894_29808229_29808294_29808569_29808742_29810076
transcript_53337.known	chr16	+	2540	5	FSM	ENSG00000103495.15	ENST00000322945.11	2540	5	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_4	194.972273669873	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGGCTCTGGATTGAAT	29799421	True	NA	11	True	AATAAA	-18	NA	29806528	29811164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29806894_29806977_29807829_29808229_29808294_29808569_29808742_29810076
transcript_53342.known	chr16	+	1464	3	FSM	ENSG00000103495.15	ENST00000568544.5	1464	3	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_2	239	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCGCGGACCCCATTACAATA	29807265	True	NA	-28	True	NA	NA	NA	29808050	29811125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29808294_29808569_29808742_29810076
transcript_53343.known	chr16	+	1470	3	FSM	ENSG00000167371.21	ENST00000567659.3	1470	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	25.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCCCCCACCCCTAAG	29810474	True	NA	NA	False	NA	NA	NA	29812190	29814725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29812324_29812989_29813934_29814332
transcript_53344.known	chr16	+	1461	3	FSM	ENSG00000103495.15	ENST00000563402.1	1461	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	384.5	1142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCTGTTTCTGGCTCTGGA	29799463	False	NA	5	True	AATAAA	-12	NA	29806570	29811158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29806894_29806977_29807067_29810109
transcript_53345.known	chr16	+	1593	4	FSM	ENSG00000103495.15	ENST00000568282.1	1593	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	468.865533910191	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGACCCCATTACAATAAAT	29807360	False	NA	-25	True	NA	NA	NA	29808145	29811128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29808294_29808569_29808742_29809539_29809772_29810087
transcript_53346.known	chr16	+	3002	2	FSM	ENSG00000167371.21	ENST00000300797.7	3002	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTCCAATCTCGGTT	29810524	True	NA	5	True	AATAAA	-16	NA	29812240	29815880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29812352_29812989
transcript_53347.known	chr16	+	3874	3	FSM	ENSG00000280789.2	ENST00000320330.8	3874	3	0	0	0	0	multi-exon	FALSE	canonical	3	924	junction_1	22	1656	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAAGTTGTGTCCTTGTT	29813323	True	NA	19	True	NA	NA	NA	29816151	29822489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29817008_29817209_29817293_29819554
transcript_53349.known	chr16	-	1843	6	FSM	ENSG00000103502.14	ENST00000219789.11	1843	6	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_5	32.124756808418	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTTCTCAGAGTGTGG	-29857599	True	NA	-11	True	AATAAA	-18	NA	29863226	29858356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814
transcript_53350.known	chr16	-	1671	5	FSM	ENSG00000103502.14	ENST00000566113.5	1671	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	205.74255758107	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTCTGTCAATGAGTTGG	-29857577	True	NA	-26	True	AATAAA	-3	NA	29863204	29858371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862814
transcript_53351.known	chr16	-	1532	7	FSM	ENSG00000103502.14	ENST00000569956.5	1532	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	179.802360632137	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTAATAAATACTCGTCT	-29857578	True	NA	-39	True	NA	NA	NA	29863205	29858384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29859335_29859441_29859524_29860580_29860663_29861105_29861260_29862585_29862721_29862814_29862866_29863127
transcript_53354.known	chr16	+	729	6	FSM	ENSG00000214725.9	ENST00000565014.5	729	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	1.74355957741627	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGTGGTTTCTCTGGGG	29863548	False	NA	8	True	AATAAA	-21	NA	29863592	29868053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865355_29865443_29867863
transcript_53355.nnic	chr16	+	731	6	NNC	ENSG00000214725.9	novel	729	6	NA	NA	-45	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	2.0591260281974	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	NA	False	NA	3	True	AATAAA	-16	NA	29863547	29868048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_29863731_29864303_29864392_29864727_29864876_29865159_29865238_29865393_29865443_29867863
transcript_53362.nnic	chr16	+	534	4	NIC	ENSG00000214725.9	novel	729	6	NA	NA	-45	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	1.69967317119759	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCATGTGTGGTTTCTC	NA	False	NA	3	True	AATAAA	-16	NA	29863547	29868048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29863731_29864303_29864392_29865159_29865238_29867863
transcript_53364.known	chr16	-	3843	18	FSM	ENSG00000174938.15	ENST00000617533.5	3843	18	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_12	63.5101822749326	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	NA	False	NA	-11	True	AATAAA	-21	NA	29899550	29871158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_53367.known	chr16	-	3801	17	FSM	ENSG00000174938.15	ENST00000308713.9	3801	17	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	78.3250438876353	665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	NA	False	NA	-11	True	AATAAA	-21	NA	29899547	29871158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29895258_29895461_29895720_29895861_29896821_29897122_29897852_29897985_29898940
transcript_53369.known	chr16	-	3015	16	FSM	ENSG00000174938.15	ENST00000346932.9	3015	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	87.154422339508	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCGGTGGAGTGTGGG	-29897534	False	1530	-11	True	AATAAA	-21	NA	29899064	29871158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29871729_29872186_29872284_29872408_29872527_29872704_29872744_29873239_29873432_29873537_29873730_29876755_29876951_29877270_29877468_29878286_29878426_29879863_29880065_29885585_29885750_29887648_29887818_29888539_29888726_29896821_29897122_29897852_29897985_29898940
transcript_53378.nic	chr16	+	1251	6	NIC	ENSG00000174939.11	novel	1732	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_5	37.2934310569569	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29900335	False	NA	76	True	AATAAA	-17	NA	29900353	29919864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787_29905960_29906078_29906128_29919530
transcript_53385.known	chr16	+	775	4	FSM	ENSG00000174939.11	ENST00000563177.5	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	26.6624996744283	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCCTTGAAGGAAGGTGC	29898526	True	NA	NA	False	GGGGCT	-33	NA	29900374	29905887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29900567_29901551_29901921_29904851_29904966_29905787
transcript_53386.nnic	chr16	+	833	4	NIC	ENSG00000174939.11	novel	775	4	NA	NA	-21	35	combination_of_known_splicesites	FALSE	canonical	3	13	junction_3	37.9326889224701	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGCAATTATTAACAACA	29900335	False	NA	5	True	AATAAA	-19	NA	29900353	29919667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901551_29901921_29904851_29904966_29919530
transcript_53388.nnic	chr16	+	764	4	NIC	ENSG00000174939.11	novel	1115	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	42.6953028902348	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29898514	True	NA	9	True	TATAAA	-19	NA	29900362	29906056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901743_29901921_29904851_29904966_29905787
transcript_53389.known	chr16	+	1115	4	FSM	ENSG00000174939.11	ENST00000483405.5	1115	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	39.5165225640561	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29898530	True	NA	9	True	TATAAA	-19	NA	29900378	29906056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29900742_29901551_29901921_29904851_29904966_29905787
transcript_53391.nnic	chr16	+	1196	4	NIC	ENSG00000174939.11	novel	1115	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	43.3999487966928	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29898514	True	NA	76	True	AATAAA	-17	NA	29900362	29919864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900742_29901551_29901921_29904851_29904966_29919530
transcript_53395.nnic	chr16	+	719	3	NIC	ENSG00000174939.11	novel	775	4	NA	NA	-21	35	combination_of_known_splicesites	FALSE	canonical	3	6	junction_2	16	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATGGCAATTATTAACAACA	29900335	False	NA	5	True	AATAAA	-19	NA	29900353	29919667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900567_29901551_29901921_29919530
transcript_53398.nnic	chr16	+	1082	3	NIC	ENSG00000174939.11	novel	1115	4	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	1.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATGGTTATTTGTAATTT	29898514	True	NA	76	True	AATAAA	-17	NA	29900362	29919864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29900742_29901551_29901921_29919530
transcript_53402.known	chr16	+	1816	3	FSM	ENSG00000174939.11	ENST00000308748.10	1816	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_2	13.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCGACTACTTCCTTCGC	29900383	False	NA	9	True	TATAAA	-19	NA	29900487	29906056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29901921_29904851_29904966_29905787
transcript_53405.known	chr16	+	1013	7	FSM	ENSG00000149932.17	ENST00000570255.6	1013	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	376.069585759515	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957472	True	NA	14	True	AATAAA	-16	NA	29962110	29973048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972041_29972141_29972949
transcript_53410.nic	chr16	+	960	6	NIC	ENSG00000149932.17	novel	946	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	263	junction_1	219.287391338399	3373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957423	True	NA	14	True	AATAAA	-16	NA	29962061	29973048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29962133_29963109_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_53417.known	chr16	+	946	6	FSM	ENSG00000149932.17	ENST00000279396.11	946	6	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	254.781004001476	3538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGTGTATGGTGTTTAT	29957440	True	NA	14	True	AATAAA	-16	NA	29962078	29973048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407_29971579_29972949
transcript_53422.known	chr16	+	1249	5	FSM	ENSG00000149932.17	ENST00000561899.6	1249	5	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	284.226472201306	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGGTTTTACTTAT	29957465	True	NA	-10	True	NA	NA	NA	29962103	29972005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29962133_29963106_29963309_29963399_29963590_29968024_29968255_29971407
transcript_53431.known	chr16	+	4937	16	FSM	ENSG00000149930.18	ENST00000308893.9	4937	16	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_11	15.1798111538539	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGCCTTTGGCCCAGGCT	29969759	True	NA	7	True	AATAAA	-15	NA	29973867	29988393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29974649_29977737_29977905_29978088_29978161_29978251_29978354_29978798_29978845_29978973_29979071_29979194_29979309_29979416_29979509_29981660_29981755_29981858_29981941_29982733_29982902_29983071_29983333_29983502_29983665_29985212_29985579_29985657_29985862_29986264
transcript_53443.known	chr16	+	1412	8	FSM	ENSG00000169592.15	ENST00000562441.5	1412	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	105.686482830404	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTTCTGTATTAAAGGAGT	29986735	True	NA	-4	True	TTTAAA	-35	NA	29996245	30005762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30004567_30004658_30005220
transcript_53448.nic	chr16	+	1665	8	NIC	ENSG00000169592.15	novel	1926	11	NA	NA	104	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_7	90.4492190374787	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTTTTTGTCCTTTTT	29995783	False	NA	24	True	ATTAAA	-14	NA	29995818	30005790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30004567_30004658_30005220
transcript_53463.known	chr16	+	883	7	FSM	ENSG00000169592.15	ENST00000567065.5	883	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	88.4006033161916	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGATGCCCCCCCCCACG	29986735	True	NA	NA	False	GGGGCT	-35	NA	29996245	30005323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30001531_30005220
transcript_53465.known	chr16	+	1154	7	FSM	ENSG00000169592.15	ENST00000563197.6	1154	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	52.3789610011076	1415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29986730	True	NA	25	True	ATTAAA	-15	NA	29996240	30005791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005220
transcript_53466.nic	chr16	+	1429	7	NIC	ENSG00000169592.15	novel	1154	7	NA	NA	104	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_6	83.0015060104333	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTTTTTGTCCTTTTTT	29995783	False	NA	25	True	ATTAAA	-15	NA	29995818	30005791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413_30001531_30005367
transcript_53468.known	chr16	+	880	7	FSM	ENSG00000169592.15	ENST00000567705.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	92.8505370055673	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTAAACATGCACGGGTGTC	29986739	True	NA	NA	False	NA	NA	NA	29996249	30005577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001464_30001531_30005220
transcript_53475.known	chr16	-	2560	7	FSM	ENSG00000149929.16	ENST00000279392.8	2560	7	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	20.5216687647201	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTACTATTCAGTGGCCA	-29994640	True	NA	-8	True	AATAAA	-20	NA	29995617	29992329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29993905_29994844_29995102_29995218_29995342_29995464_29995540
transcript_53479.known	chr16	+	1489	6	FSM	ENSG00000169592.15	ENST00000304516.11	1489	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	77.0418068323946	418	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTCTTTAAAAGGGCAGCT	29995679	False	NA	-49	True	NA	NA	NA	29995714	30005717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30005220
transcript_53485.known	chr16	-	988	6	FSM	ENSG00000149929.16	ENST00000564026.1	988	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	53.4131070056779	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTCCCCCATTCTCACC	-29995608	False	NA	-4	True	AATAAA	-27	NA	29995643	29992989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_29993371_29993458_29993558_29993639_29993809_29995102_29995218_29995342_29995464_29995540
transcript_53490.known	chr16	-	2313	5	FSM	ENSG00000149926.14	ENST00000380495.9	2325	5	12	0	12	0	multi-exon	FALSE	canonical	3	63	junction_4	8.44097150806707	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGCCCTTGCCACCAAG	-30031149	False	NA	-5	True	AATAAA	-22	NA	30031259	30024426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30025468_30025725_30025822_30026608_30026844_30029431_30029516_30030402
transcript_53498.known	chr16	-	1050	3	FSM	ENSG00000149927.18	ENST00000567824.1	1050	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAGGCTCCTAGGAAGAG	-30021578	False	NA	NA	False	NA	NA	NA	30021688	30012263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30012678_30013466_30013597_30021182
transcript_53499.known	chr16	+	435	2	FSM	ENSG00000169592.15	ENST00000380503.7	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTCCTAGACCGACTTC	29986707	True	NA	NA	False	NA	NA	NA	29996217	29996807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546
transcript_53500.known	chr16	+	625	6	FSM	ENSG00000169592.15	ENST00000567254.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_5	35.9199109130298	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCACCTGAGGGAGGCT	29986733	True	NA	NA	False	NA	NA	NA	29996243	30001575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001413
transcript_53501.known	chr16	-	2013	11	FSM	ENSG00000149927.18	ENST00000350119.9	2013	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.3891272223562	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGACTCGTGTGTGCTGG	-30010949	True	NA	-5	True	AATAAA	-14	NA	30011027	30005513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30006332_30006412_30006510_30006595_30006678_30006784_30006949_30007030_30007091_30007172_30007300_30008995_30009106_30009201_30009277_30009477_30009558_30009960_30010236_30010902
transcript_53502.known	chr16	+	4469	7	FSM	ENSG00000169592.15	ENST00000569957.5	4469	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	102.551883887566	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGAGTGGCTCTGGGTTT	29986727	True	NA	8	True	AATGAA	-12	NA	29996237	30005774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_29996392_29996546_29996618_29996807_29996861_30000757_30000837_30000928_30001041_30001211_30004658_30005220
transcript_53503.known	chr16	+	2323	14	FSM	ENSG00000285043.3	ENST00000338110.11	2323	14	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5395.92772594932	15257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30053000	True	NA	21	True	AATAAA	-18	NA	30053150	30070414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30053218_30053463_30053500_30054783_30054928_30055171_30055328_30063728_30064249_30064423_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_53511.known	chr16	+	1640	10	FSM	ENSG00000149925.22	ENST00000642816.3	1640	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	4765.61925037095	9733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	29959537	True	NA	21	True	AATAAA	-18	NA	30065759	30070414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30065928_30066884_30067039_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_53518.known	chr16	+	1550	9	FSM	ENSG00000149925.22	ENST00000563060.6	1550	9	0	0	0	0	multi-exon	FALSE	canonical	3	2581	junction_1	2958.74876161782	11686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30064017	False	NA	21	True	AATAAA	-18	NA	30064273	30070414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30064506_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_53519.known	chr16	+	1603	9	FSM	ENSG00000149925.22	ENST00000412304.6	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	3777.50502771009	6723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTCGGCCGTCCGTGTCT	30064023	False	NA	18	True	AATAAA	-15	NA	30064496	30070411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30064785_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_5352.known	chr1	-	1776	16	FSM	ENSG00000132781.20	ENST00000355498.6	1776	16	0	0	0	0	multi-exon	FALSE	canonical	1	75	junction_2	59.454184041159	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340070	False	NA	-2	True	AGTAAA	-20	NA	45340115	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333562_45334390_45334512_45339975
transcript_53520.known	chr16	+	1499	8	FSM	ENSG00000149925.22	ENST00000569798.5	1499	8	0	0	0	0	multi-exon	FALSE	canonical	3	7633	junction_1	1361.86656123581	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATGCTAAGTCCATCAC	29959549	True	NA	-41	True	NA	NA	NA	30065771	30070352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068979_30069305_30069390_30069498_30069674_30069829
transcript_53521.known	chr16	+	1447	9	FSM	ENSG00000149925.22	ENST00000395240.7	1447	9	0	0	0	0	multi-exon	TRUE	canonical	3	704	junction_5	3651.02947596633	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCACACTGCCAAATAAACAG	29959554	True	NA	-13	True	NA	NA	NA	30065776	30070380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30065928_30067233_30067367_30067449_30067662_30068645_30068701_30068817_30068991_30069305_30069390_30069498_30069674_30069829_30070030_30070116
transcript_53522.known	chr16	+	801	4	FSM	ENSG00000149925.22	ENST00000566130.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	11256	junction_2	244.835999531659	1903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGGCCGTCCGTGTCTTGT	30069044	False	NA	21	True	AATAAA	-18	NA	30069261	30070414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30069390_30069498_30069674_30069829_30070030_30070116
transcript_53527.known	chr16	+	1402	9	FSM	ENSG00000149923.14	ENST00000279387.12	1402	9	0	0	0	0	multi-exon	FALSE	canonical	3	2200	junction_1	376.416574422541	5059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGGTTTGTGCCAGACT	30055634	True	NA	108	True	AATAAA	-15	NA	30075993	30085376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_53528.known	chr16	+	1301	8	FSM	ENSG00000149923.14	ENST00000627746.2	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_2	1053.07948805551	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAAAAGAAGAAAAATGGT	30055663	True	NA	88	True	GATAAA	-30	NA	30076022	30085356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_53529.known	chr16	+	1447	8	FSM	ENSG00000149923.14	ENST00000563200.5	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	2200	junction_1	402.154097787586	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAATTCTAATAAAAGAAG	30055647	True	NA	79	True	GATAAA	-21	NA	30076006	30085347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083782_30084665_30084856_30084932
transcript_5353.known	chr1	-	501	3	FSM	ENSG00000132781.20	ENST00000531105.5	501	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	47	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTTTATGTTGTATTTT	-45340118	False	NA	-6	True	AGTAAA	-16	NA	45340163	45329245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45334390_45334512_45339975
transcript_53530.known	chr16	+	1490	9	FSM	ENSG00000149923.14	ENST00000566749.5	1490	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	1072.82540954948	1819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGTTTTTGGGTTTGTGCC	30055657	True	NA	103	True	AATAAA	-10	NA	30076016	30085371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076095_30076314_30076476_30081258_30081311_30082483_30082535_30082745_30082964_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_53531.known	chr16	+	1333	8	FSM	ENSG00000149923.14	ENST00000561610.1	1333	8	0	0	0	0	multi-exon	FALSE	canonical	3	2822	junction_4	222.237600374932	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGATAAAAATTTTGAGAA	30055865	False	NA	50	True	NA	NA	NA	30076224	30085318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30076476_30081258_30081311_30082483_30082535_30082745_30082848_30083393_30083568_30083654_30083782_30084665_30084856_30084932
transcript_53532.known	chr16	-	1843	9	FSM	ENSG00000149922.12	ENST00000395224.7	1843	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	6.19349457091875	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGGGCTCCTGTGTTTGG	-30091632	False	2678	2	True	AATAAA	-28	NA	30091924	30085792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075_30091242_30091872
transcript_53533.known	chr16	-	1796	8	FSM	ENSG00000149922.12	ENST00000279386.6	1796	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_4	4.45384493374854	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACATTGGGCTCCTGTGTT	-30090957	False	NA	-1	True	AATAAA	-25	NA	30091249	30085795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30086439_30086511_30086696_30086777_30086852_30088544_30088616_30088692_30088840_30088942_30089211_30090757_30090993_30091075
transcript_53536.known	chr16	-	371	5	FSM	ENSG00000090238.12	ENST00000568674.1	371	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	99.9924997187289	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAGTACAAAGAGGGGAAG	-30093530	True	NA	NA	False	NA	NA	NA	30096208	30092777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095336_30096096
transcript_53537.known	chr16	-	796	5	FSM	ENSG00000090238.12	ENST00000566595.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	131.873755918302	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGGAGCTCTGGACCCTC	-30096620	True	NA	NA	False	NA	NA	NA	30096912	30092636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096615
transcript_53538.known	chr16	-	730	5	FSM	ENSG00000090238.12	ENST00000563788.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	134.436555668464	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCATGCACTGTGA	-30096623	True	NA	NA	False	NA	NA	NA	30096915	30092576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094788_30094898_30095102_30095147_30095251_30095435_30096744
transcript_5354.known	chr1	-	1677	16	FSM	ENSG00000132781.20	ENST00000475516.5	1677	16	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_14	72.9354661479737	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGTTGTATTTTTTTG	-45340035	False	NA	-2	True	AGTAAA	-20	NA	45340080	45329241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45329438_45330515_45330558_45331181_45331335_45331419_45331557_45331660_45331850_45332022_45332087_45332165_45332311_45332390_45332489_45332573_45332688_45332762_45332835_45332917_45332960_45333096_45333171_45333284_45333325_45333412_45333498_45334390_45334512_45339975
transcript_53541.known	chr16	+	1650	2	FSM	ENSG00000250616.3	ENST00000515455.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	30096297	True	NA	6	True	AGTAAA	-18	NA	30096429	30104116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30097420_30103456
transcript_53543.nnic	chr16	+	1332	2	FSM	ENSG00000250616.3	ENST00000693600.1	718	2	-614	0	31	0	multi-exon	FALSE	canonical	3	39	junction_1	0	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTCAGTGCTGGTTTT	30096328	True	NA	6	True	AGTAAA	-18	NA	30096460	30104116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30097420_30103743
transcript_53544.known	chr16	-	669	3	FSM	ENSG00000090238.12	ENST00000570099.5	669	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGGCTCGCGTGTAATC	-30094588	False	NA	-16	True	AATAAA	-18	NA	30094880	30092313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30092800_30094384_30094476_30094788
transcript_53545.known	chr16	-	1078	10	FSM	ENSG00000102886.15	ENST00000406256.8	1078	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	2.10818510677892	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCGTTGTGCTGAGGGTGA	-30113519	False	NA	-1	True	AATAAA	-18	NA	30113537	30104809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30105010_30108212_30108265_30108372_30108433_30111387_30111522_30112131_30112222_30112305_30112425_30112522_30112569_30112657_30112794_30113021_30113065_30113339
transcript_53547.nic	chr16	-	1700	9	NIC	ENSG00000102882.12	novel	1787	9	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	99.9087083291542	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCTGTCTGTGTTC	-30123002	False	NA	-1	True	TATAAA	-24	NA	30123020	30114104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30122926
transcript_53548.known	chr16	-	2567	8	FSM	ENSG00000102882.12	ENST00000484663.5	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	25.8093480928828	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGGCTCTGTCTGTGTT	-30122950	False	2208	-2	True	TATAAA	-23	NA	30122968	30114105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30114709_30116635_30116791_30116893_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823
transcript_53549.known	chr16	-	1718	9	FSM	ENSG00000102882.12	ENST00000490298.5	1718	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	99.4018831562059	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTATGGCTGACCCTG	-30121019	True	NA	-16	True	TATAAA	-9	NA	30123227	30114119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30114709_30116635_30116787_30116950_30117004_30117153_30117286_30117669_30117785_30118046_30118164_30118348_30118539_30121823_30122007_30123039
transcript_5355.known	chr1	-	2229	6	FSM	ENSG00000280670.3	ENST00000626177.2	2229	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.83321838943783	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	NA	False	NA	60	True	ATTAAA	-18	NA	45500079	45493865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_53551.known	chr16	+	1623	11	FSM	ENSG00000102879.16	ENST00000219150.10	1623	11	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_2	7.85111457055621	222	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCAGACTCTGATGACT	30183509	True	NA	NA	False	AATAAA	-20	NA	30183601	30189076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30183726_30185208_30185408_30186597_30186721_30186815_30186946_30187038_30187224_30187381_30187502_30187724_30187830_30187941_30188088_30188191_30188250_30188360_30188577_30188859
transcript_53559.known	chr16	+	1355	8	FSM	ENSG00000261052.6	ENST00000338971.10	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	63.314891693851	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGATTTGTGTTCATGTAG	NA	False	NA	6	True	AATAAA	-18	NA	30199254	30204310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30199328_30200724_30200877_30200980_30201107_30201195_30201294_30202689_30202817_30202911_30203007_30203504_30203686_30203807
transcript_5356.known	chr1	-	2095	5	FSM	ENSG00000280670.3	ENST00000629482.3	2095	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	4.96865172858795	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCCTGATCCTTTTCACT	NA	False	NA	60	True	ATTAAA	-18	NA	45500073	45493865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45496555_45496624_45497298_45497384_45499344_45499444_45499531
transcript_53565.known	chr16	+	762	5	FSM	ENSG00000132207.18	ENST00000345535.8	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	236.72597554979	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGCCTTATGGTGGATGC	NA	False	NA	NA	False	AATAAA	-14	NA	30193903	30197561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30194273_30194739_30194792_30196973_30197102_30197269_30197358_30197436
transcript_5357.known	chr1	-	2053	5	FSM	ENSG00000280670.3	ENST00000625766.2	2053	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.7227615711298	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGGGAGTGATACACTGAT	NA	False	NA	0	True	AATAAA	-27	NA	45500048	45493925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45495167_45495417_45495546_45496555_45496624_45499344_45499444_45499531
transcript_53571.known	chr16	-	335	3	FSM	ENSG00000169627.9	ENST00000569282.2	335	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	1200.5	814	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	-30193217	True	NA	NA	False	ATTAAA	-15	NA	30193666	30192933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193075_30193357_30193418_30193532
transcript_53572.known	chr16	-	1012	3	FSM	ENSG00000169627.9	ENST00000305321.4	1012	3	0	0	0	0	multi-exon	FALSE	canonical	3	2524	junction_1	90.5	13133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	NA	False	NA	NA	False	ATTAAA	-14	NA	30194306	30192934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193075_30193357_30193456_30193532
transcript_53573.known	chr16	-	687	2	FSM	ENSG00000169627.9	ENST00000567436.2	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	2705	junction_1	0	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTCTGTGTCGATGTGT	NA	False	NA	NA	False	ATTAAA	-15	NA	30193697	30192933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193456_30193532
transcript_53575.known	chr16	-	307	2	FSM	ENSG00000169627.9	ENST00000565525.1	307	2	0	0	0	0	multi-exon	FALSE	canonical	3	2524	junction_1	0	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTTCTGTGTCGATGTG	-30193075	False	NA	NA	False	ATTAAA	-14	NA	30193524	30192934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30193075_30193357
transcript_53580.known	chr16	+	418	1	FSM	ENSG00000278887.2	ENST00000624024.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTCTTTCTTGTGCACTT	NA	False	NA	NA	False	AATAAA	-15	NA	30206509	30206927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30206500_30206900
transcript_53583.known	chr16	-	2362	13	FSM	ENSG00000183604.15	ENST00000411546.4	2374	13	7	5	-1	-5	multi-exon	TRUE	canonical	3	32	junction_8	155.838302059824	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAACGTTTCTTCTTTTTC	-30334611	True	NA	NA	False	AATAAA	-30	NA	30335374	30285022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30285458_30286166_30286269_30288560_30288786_30291202_30291376_30293098_30293197_30294114_30294188_30294565_30294692_30298376_30298591_30299868_30299928_30301221_30301359_30305054_30305211_30305789_30305954_30334974
transcript_53586.known	chr16	-	3361	7	FSM	ENSG00000169217.9	ENST00000305596.8	3361	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_6	25.5864547498606	408	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCAGTTTGTGGTAATT	-30350355	True	NA	-8	True	AATAAA	-17	NA	30355308	30350772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30353096_30353180_30353288_30353367_30353801_30353900_30354059_30354183_30354323_30354603_30354708_30355211
transcript_53589.nnic	chr16	+	946	2	NIC	ENSG00000260219.3	novel	992	2	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGGTTCTTTTCCAATT	30355408	False	NA	NA	False	AAAACA	-14	NA	30355420	30357111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_30355621_30356365
transcript_53590.known	chr16	+	992	2	FSM	ENSG00000260219.3	ENST00000563252.2	992	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACAACAGCAGGTTCTTT	30355321	True	NA	NA	False	AAAACA	-7	NA	30355440	30357104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30355621_30356292
transcript_53591.nnic	chr16	+	1374	2	FSM	ENSG00000260219.3	ENST00000688846.1	925	2	-462	13	-7	-4	multi-exon	FALSE	canonical	2	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTACAACAGCAGGTT	30355314	True	NA	NA	False	AAAACA	-3	NA	30355433	30357100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30356000_30356292
transcript_53592.nnic	chr16	+	847	2	FSM	ENSG00000260219.3	ENST00000688695.1	853	2	-2	8	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACAGCAGGTTCTTTTCCA	30355776	False	NA	NA	False	AAAACA	-11	NA	30355895	30357108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30356000_30356365
transcript_53593.known	chr16	-	2484	2	FSM	ENSG00000169221.14	ENST00000475650.1	2484	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTTCTGCCTTGTTA	NA	False	NA	-6	True	NA	NA	NA	30359674	30357101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30358574_30358662
transcript_53595.nic	chr16	+	787	6	ISM	ENSG00000180209.12	ENST00000322861.12	657	7	829	0	-189	0	3prime_fragment	FALSE	canonical	0	0	junction_1	7.5736384915046	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30375630	30377991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_53597.nic	chr16	+	765	5	NIC	ENSG00000180209.12	novel	657	7	NA	NA	65	0	intron_retention	FALSE	canonical	3	12	junction_1	4.15331193145904	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30375884	30377991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_53598.nnic	chr16	+	713	3	NNC	ENSG00000180209.12	novel	336	2	NA	NA	-597	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	8	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	30376914	False	NA	23	True	AATAAA	-24	NA	30376965	30377991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_30377434_30377653_30377703_30377795
transcript_53599.known	chr16	+	657	7	FSM	ENSG00000180209.12	ENST00000322861.12	657	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.48528137423857	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	NA	False	NA	23	True	AATAAA	-24	NA	30374801	30377991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30374861_30375819_30375913_30376144_30376221_30376422_30376528_30376619_30376699_30377653_30377703_30377795
transcript_53600.known	chr16	+	336	2	FSM	ENSG00000180209.12	ENST00000563728.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCGGCGCCTTCAGAGTG	30377511	False	NA	23	True	AATAAA	-24	NA	30377562	30377991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30377703_30377795
transcript_53603.nic	chr16	-	712	2	ISM	ENSG00000180096.13	ENST00000573615.5	1616	9	3433	-47	3433	0	3prime_fragment	FALSE	canonical	3	38	junction_1	0	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGCGAGCCTTCTCCTTCC	-30378897	False	NA	-2	True	AATAAA	-19	NA	30378937	30378136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_30378521_30378609
transcript_53611.known	chr16	-	878	3	FSM	ENSG00000179958.10	ENST00000568973.5	878	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	553	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACCAGGGGTGCCTCTGA	-30419269	False	NA	59	True	NA	NA	NA	30429800	30423978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429588
transcript_53613.known	chr16	-	1024	3	FSM	ENSG00000179958.10	ENST00000678016.1	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	549	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	-30419293	False	10531	-15	True	AATAAA	-20	NA	30429824	30423697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429747
transcript_53614.known	chr16	-	1181	3	FSM	ENSG00000179958.10	ENST00000319285.5	1181	3	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_2	14.5	2440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTGTTATTACCTGTTT	-30419499	True	NA	68	True	AGTAAA	-22	NA	30430030	30423614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429879
transcript_53615.known	chr16	-	801	2	FSM	ENSG00000179958.10	ENST00000567983.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGTCGTGAGGTTTCAAT	-30419499	True	NA	-15	True	AATAAA	-20	NA	30430030	30423697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424424_30429955
transcript_53616.known	chr16	-	749	3	FSM	ENSG00000179958.10	ENST00000565758.1	749	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	553.5	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATTATTCCTGGATGGC	-30419461	True	NA	4	True	AGTAAA	-21	NA	30429992	30424033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30424534_30429056_30429168_30429854
transcript_53617.known	chr16	-	2244	1	FSM	ENSG00000179918.19	ENST00000478753.5	2244	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	194	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTAATGTTTGGTGG	-30439992	True	NA	-8	True	AATAAA	-26	NA	30445874	30443630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30443600_30445900
transcript_53618.known	chr16	-	1511	3	FSM	ENSG00000169955.8	ENST00000568028.1	1511	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	15	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCCCTTTGCTGAGGCAG	-30534970	False	NA	NA	False	NA	NA	NA	30535004	30532305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30533149_30534196_30534311_30534450
transcript_53620.known	chr16	+	1153	2	FSM	ENSG00000235560.4	ENST00000664247.1	1153	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCTTCCACTTCATTG	30534468	True	NA	NA	False	GATAAA	-21	NA	30535048	30537149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30535481_30536428
transcript_53621.known	chr16	-	1999	2	FSM	ENSG00000169957.10	ENST00000562803.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAGGTGGGGTGGGGAGTG	-30526787	False	NA	NA	False	NA	NA	NA	30526821	30524132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30526052_30526741
transcript_53622.nnic	chr16	+	1432	2	NNC	ENSG00000235560.4	novel	1445	2	NA	NA	-10	17658	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAATGAGTATTGTGTTCT	30534458	True	NA	NA	False	AATAAA	-19	NA	30535038	30554807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_30535481_30553817
transcript_53624.known	chr16	-	427	3	FSM	ENSG00000229809.9	ENST00000566632.5	427	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	14.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGCCAGCGGCGCC	-30571278	False	NA	NA	False	NA	NA	NA	30571320	30570219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570437_30571009_30571124_30571224
transcript_53626.known	chr16	-	1106	3	FSM	ENSG00000229809.9	ENST00000223459.11	1106	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCCAGTCTTTTGTTTA	-30571398	True	NA	-2	True	AATAGA	-17	NA	30571714	30569725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570437_30571009_30571124_30571433
transcript_53627.known	chr16	-	1492	3	FSM	ENSG00000229809.9	ENST00000563276.5	1492	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	14.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGAGACCCTGGACTCAT	NA	False	NA	52	True	AAAAAG	-5	NA	30572734	30569671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570437_30571009_30571124_30572121
transcript_53629.known	chr16	-	540	3	FSM	ENSG00000229809.9	ENST00000567855.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAATAAATAATAGCCCCTG	-30571336	True	NA	NA	False	AATAAA	-29	NA	30571652	30570733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30570941_30571009_30571124_30571433
transcript_53630.known	chr16	-	3557	3	FSM	ENSG00000156853.13	ENST00000287461.8	3557	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	0.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTCCTTGTGGAATTA	-30609489	True	NA	NA	False	ATTAAA	-17	NA	30610389	30602557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30605448_30609524_30609639_30609836
transcript_53633.nic	chr16	+	1941	12	NIC	ENSG00000156858.12	novel	2316	11	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	21.4533897993836	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650723	False	NA	28	True	AGTAAA	-20	NA	30650775	30656413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_30650807_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_53634.known	chr16	+	2078	12	FSM	ENSG00000156858.12	ENST00000300835.9	2078	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.5408423669516	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650416	True	NA	28	True	AGTAAA	-20	NA	30650959	30656413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30652843_30652913_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_53638.known	chr16	+	2124	11	FSM	ENSG00000156858.12	ENST00000287463.8	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.9464280788177	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTATCTCTAGCTG	30650969	True	NA	28	True	AGTAAA	-20	NA	30650984	30656413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30651128_30651595_30651669_30651795_30651965_30652720_30653104_30653364_30653409_30654229_30654340_30654628_30655215_30655350_30655421_30655501_30655594_30655867_30655940_30656031
transcript_53639.known	chr16	+	5309	20	FSM	ENSG00000103549.22	ENST00000324685.11	5309	20	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	26.4374032024449	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTCAAGGTCAAGTCCAA	30756732	True	NA	17	True	AATAAA	-18	NA	30762321	30776307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30762361_30762474_30762678_30763117_30763286_30763417_30763560_30764178_30764386_30764937_30765060_30765180_30765328_30765424_30765500_30766162_30766283_30766378_30766559_30766740_30766877_30767893_30768016_30768102_30768531_30768618_30768737_30768837_30768988_30769185_30769399_30769474_30769601_30771832_30771974_30772088_30772191_30773937
transcript_53645.known	chr16	+	1536	10	FSM	ENSG00000156873.16	ENST00000328273.11	1536	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	78.661016746261	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATGAAATAAAATCTGCTA	30746423	True	NA	-12	True	NA	NA	NA	30748439	30757331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751282_30751548_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756354_30756521_30756589_30756716_30756803
transcript_53662.known	chr16	+	1791	9	FSM	ENSG00000156873.16	ENST00000563913.5	1791	9	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	29.8579972536672	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAATAAAATCTGCTACAC	30746426	True	NA	-9	True	NA	NA	NA	30748442	30757334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756181_30756273_30756366_30756521_30756589_30756716_30756803
transcript_53663.known	chr16	-	1363	9	FSM	ENSG00000196118.12	ENST00000543610.6	1363	9	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	4.8331537322953	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGAGCACCTTCTGG	-30761849	True	NA	-6	True	AATAAA	-31	NA	30762062	30757422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30757655_30759011_30759102_30759177_30759248_30759341_30759459_30759653_30759725_30760283_30760454_30760605_30760669_30761197_30761230_30761544
transcript_53693.known	chr16	+	1649	3	FSM	ENSG00000281991.2	ENST00000615541.3	1649	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	1	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTGTAGTTTTCATTGCT	30740622	True	NA	38	True	NA	NA	NA	30740641	30745196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30740708_30741740_30741909_30743781
transcript_53694.known	chr16	+	883	5	FSM	ENSG00000260899.1	ENST00000483578.1	883	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	119.562745033727	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTTCATTCCACTAAAGAG	30740647	False	NA	NA	False	NA	NA	NA	30740666	30751381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30740708_30741740_30741909_30748205_30748491_30748802_30748916_30751105
transcript_53698.known	chr16	-	1142	2	FSM	ENSG00000261840.4	ENST00000568500.1	1142	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACACTACTTGGTGCCTT	-30698898	True	NA	-10	True	AATAAA	-17	NA	30699058	30697712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30697932_30698135
transcript_53700.known	chr16	-	306	2	FSM	ENSG00000261840.4	ENST00000564775.3	348	2	41	1	41	-1	multi-exon	FALSE	canonical	2	4	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTTGGTGCCTTGATTAT	-30698950	False	NA	-4	True	AATAAA	-23	NA	30698961	30697706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30697932_30698880
transcript_53701.known	chr16	+	1618	7	FSM	ENSG00000156873.16	ENST00000564838.5	1618	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	107.778579607556	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGTGTCCTGTGTCTGTCT	30746385	True	NA	22	True	AATAAA	-23	NA	30748401	30757365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30748491_30748802_30748916_30751105_30751604_30753231_30753298_30753393_30753558_30756589_30756716_30756803
transcript_53702.known	chr16	-	496	2	FSM	ENSG00000196118.12	ENST00000537986.1	496	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCATCCCTGCACCCTGCTG	-30760346	False	NA	-18	True	AATAAA	-19	NA	30760559	30757434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30757655_30760283
transcript_53703.known	chr16	-	555	4	FSM	ENSG00000196118.12	ENST00000544613.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	4.98887651569859	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCTGAGCACCTTCTGG	-30760206	False	NA	-6	True	AATAAA	-31	NA	30760419	30757422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30757655_30759177_30759248_30759341_30759459_30760283
transcript_53704.known	chr16	+	648	3	FSM	ENSG00000260083.3	ENST00000564901.1	648	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTGGGAGGGGACGAGG	30875094	True	NA	NA	False	NA	NA	NA	30875460	30895080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30875487_30876029_30876119_30894547
transcript_53705.known	chr16	+	1375	2	FSM	ENSG00000260083.3	ENST00000663816.1	1375	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATAAAATGAGTGTGTCT	NA	False	NA	7	True	AATAAA	-13	NA	30875407	30895211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30876119_30894547
transcript_53706.known	chr16	+	1284	2	FSM	ENSG00000260083.3	ENST00000662645.2	1361	2	77	0	77	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	30875172	False	NA	16	True	AATAAA	-22	NA	30875538	30895220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30876119_30894516
transcript_53707.known	chr16	+	925	1	FSM	ENSG00000260083.3	ENST00000658747.1	925	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGTGTCTTTGTTGACT	30894193	True	NA	16	True	AATAAA	-22	NA	30894295	30895220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30894300_30895200
transcript_53708.known	chr16	+	626	3	FSM	ENSG00000261487.1	ENST00000562642.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGCTCTAAGGGTCTTTT	30948501	False	NA	NA	False	CATAAA	-1	NA	30948530	30956511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30948569_30953184_30953461_30956199
transcript_53710.known	chr16	+	2204	2	FSM	ENSG00000175938.7	ENST00000318663.5	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCTGTTGCTGTGAAGG	30947858	True	NA	28	True	AATAAA	-15	NA	30949067	30954938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30949518_30953184
transcript_53711.known	chr16	+	628	2	FSM	ENSG00000175938.7	ENST00000562699.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTCCCTTCCACCTTTTC	30947942	True	NA	NA	False	NA	NA	NA	30949151	30956461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30949518_30956199
transcript_53713.known	chr16	-	328	1	FSM	ENSG00000275263.1	ENST00000614997.1	328	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACGGGACTGGACTGGTGTG	-30957147	False	NA	-11	True	AATAAA	-15	NA	30957199	30956871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30956900_30957200
transcript_53714.known	chr16	+	2171	7	FSM	ENSG00000099377.14	ENST00000297679.10	2171	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	6.89605362185907	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCATCTGTCTGTCC	30984807	True	NA	14	True	ATTAAA	-15	NA	30985206	30989147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_30985298_30985652_30985825_30986048_30986205_30986422_30986532_30986604_30986705_30986839_30987003_30987767
transcript_53717.known	chr16	-	4674	10	FSM	ENSG00000099365.11	ENST00000215095.11	4674	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	1.64053589558149	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCGTGTGCTCACTTCC	-31009933	True	NA	-14	True	NA	NA	NA	31010638	30989255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_30992902_30993129_30993241_30993346_30993485_30996682_30996757_30996950_30997060_30997501_30997576_31000927_31001003_31001093_31001194_31001528_31001604_31010366
transcript_53722.known	chr16	+	1410	11	FSM	ENSG00000103496.15	ENST00000313843.8	1410	11	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	15.9940613979064	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCCTGTGCACGTGTG	31028975	True	NA	8	True	ATTAAA	-19	NA	31033557	31040164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461_31034537_31034969_31035041_31037925_31038035_31038113_31038191_31038509_31038648_31039540_31039652_31039722_31039819_31039911
transcript_53731.known	chr16	+	649	4	FSM	ENSG00000103496.15	ENST00000613541.1	649	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	22.0957512255687	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	31029222	False	NA	4	True	AATAAA	-18	NA	31033804	31034877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034225_31034326_31034461
transcript_53734.known	chr16	+	1002	3	FSM	ENSG00000103496.15	ENST00000461455.5	1002	3	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	18	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCTCAGCCTTAGTCATT	31029005	True	NA	4	True	AATAAA	-18	NA	31033587	31034877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034225
transcript_53735.known	chr16	+	846	4	FSM	ENSG00000103496.15	ENST00000565483.1	846	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	66.594961437701	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACTTACTTTCTCCT	31029023	True	NA	-20	True	NA	NA	NA	31033605	31034853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31033836_31034012_31034115_31034203_31034326_31034461
transcript_53736.known	chr16	-	2685	3	FSM	ENSG00000167394.13	ENST00000300849.5	2685	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	2.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCATCTTCTGTGTTCTGG	-31074212	False	NA	-4	True	ATTAAA	-19	NA	31074240	31060846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31062281_31063812_31064482_31073658
transcript_53747.known	chr16	-	664	3	FSM	ENSG00000167397.15	ENST00000394971.7	664	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	488.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCTTTGGCATGTGA	-31094537	False	NA	NA	False	NA	NA	NA	31094549	31091103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093422_31094234
transcript_53749.known	chr16	-	870	3	FSM	ENSG00000167397.15	ENST00000498155.1	870	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	488.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGGTCCAAGAACCCCAG	-31095968	False	NA	NA	False	NA	NA	NA	31095980	31091174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093422_31095388
transcript_53751.known	chr16	-	876	3	FSM	ENSG00000167397.15	ENST00000300851.10	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	478.5	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31085801	True	NA	-5	True	AATAAA	-30	NA	31094760	31090841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093483_31094556
transcript_53753.known	chr16	-	901	2	FSM	ENSG00000167397.15	ENST00000354895.4	901	2	0	0	0	0	multi-exon	FALSE	canonical	3	284	junction_1	0	2296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094944	False	NA	-5	True	AATAAA	-30	NA	31094956	31090841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31094556
transcript_53754.known	chr16	-	840	3	FSM	ENSG00000167397.15	ENST00000394975.3	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	897	junction_2	40	5868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGTCTGAACCATGTGT	-31085838	True	NA	-17	True	AATAAA	-18	NA	31094797	31090853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31093311_31093422_31094556
transcript_53755.known	chr16	-	1077	4	FSM	ENSG00000167397.15	ENST00000319788.11	1077	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	420.74457809935	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGTCTGCCATGGACT	-31094928	False	NA	-5	True	AATAAA	-30	NA	31094940	31090841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31091343_31092782_31092865_31093311_31093422_31094556
transcript_53757.known	chr16	+	2036	12	FSM	ENSG00000103507.14	ENST00000219794.11	2036	12	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_11	55.9756440541127	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAATGTTTCCGGGTCCCAG	31101434	True	NA	12	True	NA	NA	NA	31108385	31112791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112120
transcript_53758.nic	chr16	+	1752	12	NIC	ENSG00000103507.14	novel	2036	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	20	junction_11	202.212350539584	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCGGGCCCCGTGTGTGG	31101417	True	NA	17	True	ATTAAA	-19	NA	31108368	31112566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868_31112028_31112196
transcript_53761.known	chr16	+	1997	11	FSM	ENSG00000103507.14	ENST00000394950.7	1997	11	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	39.4827810570633	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCGGGCCCCGTGTGTGGG	NA	False	NA	18	True	ATTAAA	-20	NA	31108293	31112567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31108480_31109046_31109419_31109510_31109580_31109672_31109784_31110076_31110125_31110204_31110325_31110400_31110500_31110687_31110762_31111090_31111220_31111299_31111390_31111868
transcript_53772.known	chr16	+	392	1	FSM	ENSG00000278133.1	ENST00000613584.1	392	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTGTTTTTGTAGTTCTT	31123652	False	NA	NA	False	AATAAA	-19	NA	31123672	31124064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31123700_31124100
transcript_53773.known	chr16	-	1837	6	FSM	ENSG00000052344.16	ENST00000317508.11	1837	6	0	0	0	0	multi-exon	TRUE	canonical	3	716	junction_3	21.0428135001002	1047	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGTGCATGTGTGAAG	-31125319	True	NA	-5	True	ATTAAA	-15	NA	31135727	31131432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31132336_31132428_31132596_31132681_31132954_31133225_31133389_31135153_31135172_31135413
transcript_53777.nnic	chr16	-	825	3	NNC	ENSG00000178226.11	novel	2778	13	NA	NA	634	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTGTGTGGCCTTGTG	-31142159	False	NA	-3	True	AATAAA	-13	NA	31142224	31138926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_31139417_31141722_31141961_31142127
transcript_53780.nnic	chr16	-	1004	2	NIC	ENSG00000178226.11	novel	2778	13	NA	NA	622	-1	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACCTGTGTGGCCTTGTG	NA	False	NA	-3	True	AATAAA	-13	NA	31142236	31138926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_31139417_31141722
transcript_53786.known	chr16	+	1818	15	FSM	ENSG00000089280.19	ENST00000380244.7	1818	15	0	0	0	0	multi-exon	FALSE	canonical	3	521	junction_3	519.856495112069	15840	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103903	True	NA	27	True	ATTAAA	-17	NA	31180138	31191602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183860_31184003_31184208_31184397_31184938_31185180_31186801_31186837_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_53787.known	chr16	+	1787	14	FSM	ENSG00000089280.19	ENST00000566605.5	1787	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	674.779902753308	11279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103902	True	NA	27	True	ATTAAA	-17	NA	31180137	31191602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31185180_31188324_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_53788.known	chr16	+	4920	13	FSM	ENSG00000089280.19	ENST00000487509.6	4920	13	0	0	0	0	multi-exon	FALSE	canonical	3	1041	junction_3	462.568463401185	10846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTGTTCCTCTTCCCC	31103914	True	NA	27	True	ATTAAA	-17	NA	31180149	31191602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31180228_31182397_31182423_31182512_31182665_31183857_31184003_31184208_31184397_31184938_31188358_31189122_31189227_31189664_31189795_31190039_31190142_31190274_31190399_31190741_31190843_31190962_31191111_31191398
transcript_53789.known	chr16	+	778	3	FSM	ENSG00000089280.19	ENST00000483853.1	778	3	0	0	0	0	multi-exon	FALSE	canonical	3	2422	junction_1	261.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAACTATACCTCTGGTTC	31189734	True	NA	-17	True	NA	NA	NA	31190372	31191558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31190843_31190962_31191111_31191398
transcript_53795.known	chr16	+	1095	2	FSM	ENSG00000261359.2	ENST00000561916.2	1095	2	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTTTGTTTGAATCCT	31201825	True	NA	11	True	ATTAAA	-22	NA	31201884	31203452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31201987_31202459
transcript_53797.known	chr16	-	757	3	FSM	ENSG00000103490.14	ENST00000247470.10	757	3	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_2	11	3809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197160	True	NA	-4	True	AATATA	-18	NA	31202760	31201485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31201842_31202146_31202204_31202416
transcript_53798.known	chr16	-	696	2	FSM	ENSG00000103490.14	ENST00000350605.4	696	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31197156	True	NA	-4	True	AATATA	-18	NA	31202756	31201485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31201842_31202416
transcript_53799.known	chr16	-	650	2	FSM	ENSG00000103490.14	ENST00000565022.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	0	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGTTTTCCTGCTTC	-31202383	False	NA	-4	True	AATATA	-18	NA	31202440	31201485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31201842_31202146
transcript_53801.known	chr16	-	589	2	FSM	ENSG00000169900.8	ENST00000302964.4	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	438	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGGCTGCGCGCACACGT	-31216936	True	NA	-5	True	AATAAA	-19	NA	31217135	31215961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31216158_31216742
transcript_53804.known	chr16	-	372	3	FSM	ENSG00000156885.6	ENST00000287490.5	372	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1.5	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCGGCTCTGTGGGGAG	-31428277	True	NA	-1	True	AATAAA	-16	NA	31428360	31427730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31427858_31428014_31428152_31428252
transcript_53805.known	chr16	-	3026	1	FSM	ENSG00000260267.1	ENST00000564629.1	3026	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAACTTTGTGTATGTGAGA	-31459557	True	NA	-2	True	NA	NA	NA	31459736	31456710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31456700_31459700
transcript_53807.known	chr16	+	1805	11	FSM	ENSG00000140682.19	ENST00000394863.8	1805	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	7.67854152818099	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGGTGCTGTCTCTGAA	31471753	True	NA	6	True	CATAAA	-18	NA	31472151	31477958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562_31474758_31476011_31476186_31476480_31476563_31476861_31477011_31477309
transcript_53810.nic	chr16	+	1347	7	ISM	ENSG00000140682.19	ENST00000569703.5	1005	8	-37	949	-3	580	5prime_fragment	FALSE	canonical	2	11	junction_1	6.82316316348624	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGGTATGTTATTATTGT	31471739	True	NA	20	True	AATAAA	-29	NA	31472137	31475339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_31472202_31473440_31473557_31473681_31473735_31473834_31473978_31474151_31474240_31474349_31474456_31474562
transcript_53811.known	chr16	-	2785	13	FSM	ENSG00000140688.17	ENST00000327237.7	2785	13	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_4	21.5192097645078	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTGCAGCTGGACCC	-31506891	True	NA	-11	True	AATAAA	-31	NA	31508391	31489474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_31490933_31492008_31492087_31492196_31492341_31492977_31493049_31493466_31493525_31493602_31493788_31493865_31493937_31496848_31496951_31499301_31499408_31499492_31499526_31500685_31500732_31507763_31507879_31508073
transcript_53823.known	chr16	+	655	2	FSM	ENSG00000260625.3	ENST00000569782.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGATCCCCACAGTTT	31508416	True	NA	NA	False	AATAAA	-25	NA	31508470	31509256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31509037_31509167
transcript_53824.known	chr16	+	961	2	FSM	ENSG00000260625.3	ENST00000651898.1	961	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTAAGTACTTTAAAAACA	31508409	True	NA	NA	False	AATAAA	-13	NA	31508463	31509560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31509037_31509172
transcript_53825.known	chr16	+	488	3	FSM	ENSG00000169877.10	ENST00000302312.9	488	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	NA	False	NA	11	True	AATAAA	-23	NA	31527899	31528803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31527963_31528135_31528215_31528457
transcript_53826.nnic	chr16	+	498	2	NNC	ENSG00000169877.10	novel	488	3	NA	NA	236	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	31528193	False	NA	11	True	AATAAA	-23	NA	31528212	31528803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_31528365_31528457
transcript_53827.known	chr16	+	391	3	FSM	ENSG00000169877.10	ENST00000569954.1	391	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGGCTTCTCTTTCAT	NA	False	NA	11	True	AATAAA	-23	NA	31527913	31528803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31527932_31528187_31528215_31528457
transcript_53829.known	chr16	+	1812	9	FSM	ENSG00000131797.13	ENST00000254109.10	1844	9	32	0	4	0	multi-exon	TRUE	canonical	1	2	junction_2	6.6332495807108	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	31699961	True	NA	NA	False	NA	NA	NA	31700589	31707437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31700739_31701662_31701859_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_53832.known	chr16	+	1571	8	FSM	ENSG00000131797.13	ENST00000693004.1	1643	8	72	0	5	0	multi-exon	FALSE	canonical	3	10	junction_1	5.01426536422407	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTCCTAAACTTACTGTG	31700006	True	NA	NA	False	NA	NA	NA	31700634	31707437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31700739_31702534_31702682_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_53833.known	chr16	+	1449	7	FSM	ENSG00000131797.13	ENST00000686087.1	1777	7	36	292	1	-15	multi-exon	FALSE	canonical	0	0	junction_1	7.73340517208012	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAATCTCT	31699966	True	NA	NA	False	NA	NA	NA	31700594	31707422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31700739_31703155_31703368_31704219_31704391_31705348_31705473_31705671_31705793_31705889_31706035_31706890
transcript_53848.known	chr16	+	1670	5	FSM	ENSG00000197302.11	ENST00000531864.6	1670	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	6.60965203320114	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTATAATTAACTTTCA	31710590	True	NA	NA	False	TTTAAA	-11	NA	31713246	31794869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31792629_31792731_31793334_31793412_31793701
transcript_53851.known	chr16	+	2769	5	FSM	ENSG00000197302.11	ENST00000316491.14	2759	5	-10	0	2	0	multi-exon	FALSE	canonical	3	80	junction_4	10.7325439668328	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCATTGTATTCATTTA	31710577	True	NA	4	True	AATAAA	-14	NA	31713233	31761565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31722625_31722753_31723257_31723354_31753765_31753901_31759356
transcript_53858.known	chr16	+	1214	4	FSM	ENSG00000197302.11	ENST00000529943.6	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	44.3045019031801	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAACCATTGCAAACGTAAAA	31710572	True	NA	NA	False	NA	NA	NA	31713228	31754536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713449_31722625_31722753_31723257_31723354_31753765
transcript_53861.nnic	chr16	+	929	4	NIC	ENSG00000197302.11	novel	2759	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	45.0653845971483	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGTATGTAATGTGG	NA	False	NA	-36	True	AAAAAG	-12	NA	31713222	31759841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_31713436_31723257_31723354_31753765_31753901_31759356
transcript_53865.known	chr16	+	639	3	FSM	ENSG00000197302.11	ENST00000533488.6	639	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTAAAGAATGTGACAA	31710616	True	NA	NA	False	AAGAAA	-35	NA	31713272	31754795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31754454
transcript_53867.known	chr16	+	481	3	FSM	ENSG00000197302.11	ENST00000542684.5	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	30	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTTAAAAAAATTAAATGGG	31710630	True	NA	NA	False	NA	NA	NA	31713286	31759553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31713436_31753765_31753901_31759356
transcript_53869.nnic	chr16	+	331	2	ISM	ENSG00000197302.11	ENST00000689850.1	2924	6	26	47275	-1	-39601	5prime_fragment	FALSE	canonical	3	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTATTTTGGCCTTACCT	31710619	True	NA	5	True	ATTAAA	-22	NA	31713275	31714255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_31713436_31714084
transcript_53871.known	chr16	+	680	5	FSM	ENSG00000185947.15	ENST00000394846.7	680	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	30.7845334543176	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATAACTTTGATCAATATA	31870931	True	NA	NA	False	NA	NA	NA	31873806	31914725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31890206_31890251_31914475
transcript_53873.known	chr16	+	3268	4	FSM	ENSG00000185947.15	ENST00000300870.15	3268	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	22.2161102706022	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGAAATTACTTCAATT	31870931	True	NA	72	True	ATTAAA	-20	NA	31873806	31917357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_31873970_31884497_31884625_31885160_31885257_31914475
transcript_53878.known	chr16	-	5177	13	FSM	ENSG00000171241.9	ENST00000303383.8	5177	13	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_8	12.690766547201	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGTGTAATATATCAATGC	-46619689	True	NA	72	True	AATATA	-17	NA	46621379	46578590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46582055_46583515_46583658_46584002_46584090_46595551_46595671_46599830_46599963_46603538_46603660_46603974_46604144_46604227_46604462_46608296_46608390_46615945_46616155_46617633_46617750_46618204_46618373_46621256
transcript_53884.known	chr16	-	530	2	FSM	ENSG00000171241.9	ENST00000564272.1	530	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCATGGCATCGCTTAT	-46619661	True	NA	NA	False	AATAAA	-27	NA	46621351	46620465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46620901_46621256
transcript_53885.known	chr16	-	1591	1	FSM	ENSG00000261512.2	ENST00000574180.1	1591	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTAGAGATGGGGTTTC	-46624427	False	NA	NA	False	ATTAAA	-31	NA	46624451	46622860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46622900_46624500
transcript_53886.known	chr16	-	4017	17	FSM	ENSG00000069329.18	ENST00000568784.6	4017	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	151.644526772317	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGGAGCTTTTTTTCCCC	-46679602	True	NA	-6	True	AATAAA	-15	NA	46689147	46659676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46660652_46661717_46661862_46662242_46662483_46662982_46663163_46668929_46669053_46671704_46671861_46672264_46672473_46674313_46674463_46674563_46674661_46676582_46676693_46677314_46677399_46678942_46679157_46680670_46680854_46681376_46681501_46682078_46682176_46683507_46683607_46688313
transcript_53893.known	chr16	+	1615	7	FSM	ENSG00000091651.9	ENST00000219097.7	1615	7	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_4	35.8767179224757	1303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46680590	True	NA	20	True	AATAAA	-18	NA	46689658	46698394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_53896.nic	chr16	+	1731	7	NIC	ENSG00000091651.9	novel	1615	7	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_1	165.319891926733	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGTTGTACTTGTCATC	46689589	False	NA	20	True	AATAAA	-18	NA	46689601	46698394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_46689830_46690990_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_53897.known	chr16	+	681	7	FSM	ENSG00000091651.9	ENST00000563599.5	681	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	178.079960192668	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGGATTATGAAGAATGG	46680574	True	NA	19	True	CATAAA	-23	NA	46689642	46697511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46689771_46691057_46691121_46692381_46692546_46693092_46693183_46695561_46695675_46696016_46696086_46697457
transcript_53901.known	chr16	+	888	6	FSM	ENSG00000091651.9	ENST00000568364.6	888	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	191.473653540115	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGAATTGGAGGCCGG	46680628	True	NA	NA	False	NA	NA	NA	46689696	46697818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092_46693183_46696016_46696086_46697457
transcript_53902.known	chr16	+	1833	4	FSM	ENSG00000091651.9	ENST00000569239.5	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	456	junction_1	11.7851130197758	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGCTGGCCGGGCGGGGGG	46680590	True	NA	NA	False	GGGGCT	-29	NA	46689658	46694519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46689771_46690990_46691121_46692381_46692546_46693092
transcript_53906.nnic	chr16	-	371	2	Antisense	novelGene_ENSG00000260782.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGGGCGCGGTGGCTCA	-46789836	True	NA	NA	False	CATAAA	-32	NA	46789942	46773934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_-_46774269_46789905
transcript_53913.known	chr16	-	6845	4	FSM	ENSG00000155330.10	ENST00000285697.9	6845	4	0	0	0	0	multi-exon	TRUE	canonical	3	232	junction_2	48.5249076935409	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATCATGTATACTTACCAT	-46830037	True	NA	NA	False	AGTAAA	-18	NA	46831180	46796602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46803071_46809602_46809786_46824385_46824483_46831083
transcript_53914.known	chr16	-	6640	3	FSM	ENSG00000155330.10	ENST00000394806.6	6640	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	133.5	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATTATCATGTATACTTA	-46831139	False	NA	NA	False	AGTAAA	-14	NA	46831162	46796606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46803071_46824385_46824483_46831083
transcript_53917.known	chr16	-	3008	9	FSM	ENSG00000069345.12	ENST00000317089.10	3008	9	0	0	0	0	multi-exon	FALSE	canonical	3	773	junction_1	54.0248785283225	1071	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCAGTGTAGTCTGTCTTT	-46949295	True	NA	-4	True	AATAAA	-17	NA	46973674	46955361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971573_46971895_46971956_46973494
transcript_53926.known	chr16	-	1825	9	FSM	ENSG00000069345.12	ENST00000563158.1	1825	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	292.033575766555	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAATAGAATAAAGAATTT	-46949285	True	NA	-41	True	NA	NA	NA	46973664	46956621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_46957221_46959002_46959131_46959274_46959420_46964610_46964808_46967512_46967647_46968083_46968165_46971348_46971660_46971895_46971956_46973494
transcript_53928.nnic	chr16	+	859	3	NNC	ENSG00000261173.1	novel	516	2	NA	NA	-222	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTGTGAGCCACTGTA	46973581	True	NA	9	True	AATAAA	-20	NA	46973766	46978981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_46974126_46974576_46974700_46978604
transcript_53929.known	chr16	+	516	2	FSM	ENSG00000261173.1	ENST00000562536.1	516	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGTGAGCCACTGTAGC	46973803	False	NA	11	True	AATAAA	-22	NA	46973988	46978983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_46974126_46978604
transcript_53930.known	chr16	-	3185	18	FSM	ENSG00000129636.13	ENST00000320640.11	3185	18	0	0	0	0	multi-exon	TRUE	canonical	3	321	junction_3	30.4268366338542	112	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGTATTTCAGTGAGTTT	-47454902	True	NA	NA	False	AATAAA	-16	NA	47461063	47154390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_47155779_47158872_47158991_47161749_47161833_47162539_47162665_47218867_47218947_47237964_47238009_47258631_47258741_47260544_47260696_47311239_47311413_47313728_47313824_47365787_47365870_47375875_47375941_47428803_47428899_47451395_47451471_47452732_47452791_47454012_47454159_47459102_47459176_47460837
transcript_53931.known	chr16	+	3829	32	FSM	ENSG00000102893.16	ENST00000566044.5	3829	32	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	36.3207471032092	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCATACTGGAAATCAAAAG	47457737	True	NA	10	True	AATAAA	-16	NA	47461294	47699745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_47461427_47463881_47463994_47497398_47497489_47499755_47499895_47502990_47503091_47511664_47511773_47515520_47515602_47547432_47547549_47580294_47580359_47587667_47587764_47588904_47589103_47593499_47593558_47594136_47594215_47596372_47596532_47610825_47610921_47641034_47641091_47641598_47641693_47648532_47648617_47649099_47649205_47650543_47650627_47650830_47650922_47660505_47660568_47660656_47660820_47661718_47661801_47663676_47663735_47665941_47666033_47669214_47669418_47689040_47689176_47693377_47693508_47696380_47696489_47698447_47698589_47699228
transcript_53938.known	chr16	+	8195	15	FSM	ENSG00000102910.14	ENST00000285737.9	8195	15	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_2	22.8898203914102	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCAGGTTAGGATCATA	48240746	True	NA	NA	False	GATAAA	-18	NA	48244299	48357349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48244622_48252130_48252366_48256609_48256742_48258617_48258741_48261423_48261588_48262777_48262873_48270015_48270275_48277337_48277480_48296014_48296166_48299661_48299789_48303171_48303306_48334215_48334359_48347506_48347715_48348099_48348291_48351580
transcript_53941.known	chr16	-	2415	2	FSM	ENSG00000196470.12	ENST00000356721.3	2415	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48365807	True	NA	NA	False	ATTAAA	-25	NA	48365901	48360530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48362431_48365386
transcript_53942.nnic	chr16	-	1983	2	NNC	ENSG00000196470.12	novel	2415	2	NA	NA	555	0	intron_retention	FALSE	canonical	2	24	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48384828	False	NA	NA	False	ATTAAA	-25	NA	48384858	48360530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_48362431_48384775
transcript_53943.known	chr16	-	2110	2	FSM	ENSG00000196470.12	ENST00000394725.3	2110	2	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTACTGTGTCTGCTTTAG	-48381993	True	NA	NA	False	ATTAAA	-25	NA	48385413	48360530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48362431_48385203
transcript_53945.known	chr16	-	7077	7	FSM	ENSG00000102921.8	ENST00000262384.4	7077	7	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_2	20.9841209807162	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGGACAGTGCCTTCTT	-48608570	True	NA	-4	True	AATAAA	-17	NA	48610180	48538725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_48543262_48546146_48546255_48548006_48548115_48551385_48551483_48553538_48553670_48560753_48562445_48609774
transcript_53952.known	chr16	+	2237	4	FSM	ENSG00000260086.4	ENST00000568150.4	2244	4	7	0	7	0	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAACAAAAATAAAAGACAAA	48623005	True	NA	NA	False	GATAAA	-37	NA	48623421	48746318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48623604_48741282_48741403_48744246_48744330_48744466
transcript_53957.nnic	chr16	+	774	2	FSM	ENSG00000260086.4	ENST00000686696.1	750	2	-25	1	-6	-1	multi-exon	FALSE	canonical	3	8	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATTGCGACATTTGCTT	48622992	True	NA	NA	False	AATAAA	-16	NA	48623408	48676972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_48623604_48676393
transcript_53958.nnic	chr16	+	588	2	NNC	ENSG00000260086.4	novel	750	2	NA	NA	7	1450	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTACAGGAATTAGTTGT	48623005	True	NA	NA	False	AATAAA	-20	NA	48623421	48678423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_48623604_48678017
transcript_53962.nnic	chr16	+	686	3	NNC	ENSG00000260052.1	novel	539	2	NA	NA	-13728	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATTTGTAGTAGTAAT	48622998	True	NA	NA	False	AATAAA	-19	NA	48623414	48638719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_48623604_48637184_48637285_48638322
transcript_53963.nnic	chr16	+	1046	3	NNC	ENSG00000260052.1	novel	539	2	NA	NA	-13706	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATTTGTAGTAGTAAT	48623020	True	NA	NA	False	AATAAA	-19	NA	48623436	48638719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_48623604_48636802_48637285_48638322
transcript_53965.nnic	chr16	+	587	2	NIC	ENSG00000260086.4	novel	750	2	NA	NA	-1	-34759	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATTTGTAGTAGTAAT	48622997	True	NA	NA	False	AATAAA	-19	NA	48623413	48638719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_48623604_48638322
transcript_53966.known	chr16	-	2442	3	FSM	ENSG00000102924.12	ENST00000219197.11	2442	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACCCAGTTGCTTCGG	-49281461	True	NA	-29	True	AATAAA	-23	NA	49281838	49277916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_49279602_49280922_49281043_49281201
transcript_53968.known	chr16	+	1338	5	FSM	ENSG00000279249.3	ENST00000664312.1	1338	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	3.19178633370093	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281903	True	NA	NA	False	AATAAA	-21	NA	49282053	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285520_49285624_49287366_49287476_49289443_49289656_49289737
transcript_53971.known	chr16	+	1103	5	FSM	ENSG00000279249.3	ENST00000664244.1	1103	5	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_3	2.34520787991171	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281886	True	NA	NA	False	AATAAA	-21	NA	49282036	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285520_49285624_49287366_49287476_49289537_49289656_49289895
transcript_53972.known	chr16	+	936	5	FSM	ENSG00000279249.3	ENST00000661880.1	936	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.58287544405155	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTATTTTTCTAATGTAG	49282061	False	NA	NA	False	NA	NA	NA	49282211	49290423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49287366_49287476_49287829_49287990_49289537_49289656_49289895
transcript_53973.known	chr16	+	1102	5	FSM	ENSG00000279249.3	ENST00000669786.1	1102	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.59016994374947	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281956	True	NA	NA	False	AATAAA	-21	NA	49282106	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285482_49285521_49287366_49287476_49289403_49289656_49289895
transcript_53974.known	chr16	+	988	5	FSM	ENSG00000279249.3	ENST00000671636.1	988	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.40832691319598	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281936	True	NA	NA	False	AATAAA	-21	NA	49282086	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285482_49285521_49287366_49287476_49289537_49289656_49289895
transcript_53975.known	chr16	+	1317	5	FSM	ENSG00000279249.3	ENST00000664315.1	1317	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	3.53553390593274	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTTTAAAATAAATTTTAA	49281923	True	NA	NA	False	AATAAA	-28	NA	49282073	49290551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285482_49285624_49287366_49287476_49289403_49289656_49289895
transcript_53976.known	chr16	+	1252	5	FSM	ENSG00000279249.3	ENST00000659529.1	1252	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	3.19178633370093	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGGATTGGAACATT	49281917	True	NA	NA	False	ATTAAA	-15	NA	49282067	49290362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49285482_49285624_49287366_49287476_49289443_49289656_49289737
transcript_53977.known	chr16	+	1134	4	FSM	ENSG00000279249.3	ENST00000668624.1	1134	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.96655480858378	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281886	True	NA	NA	False	AATAAA	-21	NA	49282036	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49287366_49287476_49289403_49289656_49289895
transcript_53978.known	chr16	+	1075	4	FSM	ENSG00000279249.3	ENST00000662695.1	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281969	True	NA	NA	False	AATAAA	-21	NA	49282119	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49287366_49287476_49289537_49289656_49289737
transcript_53979.known	chr16	+	1016	4	FSM	ENSG00000279249.3	ENST00000654606.1	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTATGTGTGTGA	49281870	True	NA	NA	False	AATAAA	-21	NA	49282020	49290472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_49282233_49287366_49287476_49289537_49289656_49289895
transcript_53984.known	chr16	-	615	1	FSM	ENSG00000275155.1	ENST00000615979.1	615	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGTTGCACTGAATTTT	-49847607	False	NA	0	True	AATAAA	-18	NA	49847632	49847017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_49847000_49847600
transcript_53986.known	chr16	+	2965	7	FSM	ENSG00000205423.12	ENST00000458059.7	2965	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	85.9935398090397	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGACTTTTTCTTTATTGT	NA	False	NA	15	True	AATAAA	-22	NA	50024409	50037088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50029724_50029799_50033396_50033507_50034101_50034157_50035416
transcript_53988.known	chr16	+	656	6	FSM	ENSG00000205423.12	ENST00000562576.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	79.4521239489543	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATTTTTGCAGATGAAGT	50023111	True	NA	NA	False	NA	NA	NA	50025270	50035696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50026395_50026468_50029724_50029799_50033396_50033507_50034106_50034157_50035416
transcript_53989.known	chr16	+	1992	5	FSM	ENSG00000205423.12	ENST00000568890.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	88.4657419569858	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTGGACTTTTTCTTTAT	50023095	True	NA	12	True	AATAAA	-19	NA	50025254	50037085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50026395_50026468_50033396_50033507_50034101_50034157_50035416
transcript_53990.known	chr16	+	363	4	FSM	ENSG00000205423.12	ENST00000569647.1	363	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	13.9602610609146	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCAGGAGGCTGAGGTG	50023102	True	NA	NA	False	ACTAAA	-45	NA	50025261	50026859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50025341_50025650_50025702_50026395_50026468_50026698
transcript_53992.known	chr16	+	8440	12	FSM	ENSG00000121274.14	ENST00000561678.7	8440	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6.40764006789313	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGGTATGAGCCCTTAT	50153096	True	NA	NA	False	AATAAA	-29	NA	50153305	50235310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50154260_50211322_50211447_50214220_50214268_50216074_50216196_50217555_50217664_50222305_50222435_50223173_50223388_50224656_50224784_50224890_50224995_50225097_50225286_50227838_50228004_50229151
transcript_53994.known	chr16	-	2145	17	FSM	ENSG00000166164.16	ENST00000394689.2	2145	17	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_4	105.422198059754	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGAATGTGCTTGGGGC	-50368160	False	NA	-29	True	AATAAA	-21	NA	50368779	50319029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320778_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_53999.known	chr16	-	5424	17	FSM	ENSG00000166164.16	ENST00000394688.8	5424	17	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_14	56.181034110721	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCAGGGAGAGGGAGTCT	-50357704	True	NA	NA	False	NA	NA	NA	50368988	50315956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_50319267_50319886_50320031_50320247_50320392_50320662_50320775_50321981_50322039_50323586_50323699_50325747_50325884_50326283_50326392_50328668_50328745_50333573_50333698_50334710_50334896_50339975_50340087_50350022_50350168_50354424_50354483_50354792_50354923_50368089_50368299_50368725
transcript_54.known	ERCC-00111	+	978	1	FSM	ERCC-00111A	DQ883685	978	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2737	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00111_+_0_1000
transcript_54001.known	chr16	-	425	2	FSM	ENSG00000261092.1	ENST00000566876.1	425	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTCAAAGCCACAATGGCA	NA	False	NA	NA	False	AATAAA	-16	NA	50395133	50390915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_50391142_50394934
transcript_54003.known	chr16	+	5371	20	FSM	ENSG00000083799.18	ENST00000311559.13	5371	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.0821365399202	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	50740748	True	NA	NA	False	NA	NA	NA	50742073	50798617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50742125_50742761_50742842_50744729_50744867_50749575_50750203_50751603_50751907_50754318_50754425_50775165_50775175_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_54004.known	chr16	+	3513	18	FSM	ENSG00000083799.18	ENST00000569418.5	3513	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	13.8148909178706	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAAGGATATGAAATCATT	50740724	True	NA	3	True	AATAAA	-17	NA	50742049	50796881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50742125_50742761_50742842_50749575_50750203_50751603_50751907_50754318_50754425_50776178_50776278_50777824_50777942_50779664_50780045_50781245_50781412_50782324_50782467_50784328_50784452_50786854_50786947_50787785_50787853_50791557_50791691_50792596_50792706_50793545_50793665_50794211_50794429_50796323
transcript_54005.known	chr16	+	2248	2	FSM	ENSG00000261241.8	ENST00000576842.2	2264	2	16	0	16	0	multi-exon	FALSE	canonical	3	5	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGGTCTGAGAGTCCCT	50880178	True	NA	NA	False	AATAAA	-17	NA	50880208	50884101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880262_50881906
transcript_54006.known	chr16	+	1307	5	FSM	ENSG00000261241.8	ENST00000668895.1	1307	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGTGTCTCACAGTCTG	NA	False	NA	2	True	AATAAA	-14	NA	50880081	50901061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_50880262_50884211_50884278_50884481_50884742_50893660_50893863_50900462
transcript_54007.known	chr16	+	487	2	FSM	ENSG00000261238.1	ENST00000570060.1	487	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTTAGTGGGCTGAGGTG	NA	False	NA	NA	False	NA	NA	NA	51149238	51149819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_51149589_51149682
transcript_54008.known	chr16	-	565	2	FSM	ENSG00000103449.13	ENST00000566102.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGTGGCCTCCTACTCC	-51151231	False	NA	NA	False	NA	NA	NA	51151241	51137063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_51137553_51151165
transcript_54009.known	chr16	+	1377	1	FSM	ENSG00000224578.5	ENST00000562726.1	1377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87618	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTGCAGAACACCTAT	51645744	False	NA	NA	False	GATAAA	-29	NA	51645755	51647132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_51645800_51647100
transcript_54012.known	chr16	+	11504	39	FSM	ENSG00000177200.18	ENST00000564845.5	11504	39	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.3757482366104	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATGGAAGTTTAATTATTT	NA	False	NA	15	True	ATTAAA	-27	NA	53130920	53327451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53131059_53155925_53157542_53209481_53209814_53222643_53222756_53226365_53226513_53227395_53227465_53227547_53227604_53228982_53229101_53231418_53231506_53231646_53231785_53235184_53235307_53238342_53238587_53242839_53243017_53245335_53245480_53245594_53245851_53247292_53247504_53249870_53250067_53254437_53254606_53255599_53255780_53262986_53263098_53267293_53267491_53267926_53268127_53273625_53273786_53274212_53274303_53285595_53285700_53286225_53286344_53287956_53288015_53291724_53291768_53292832_53293053_53296955_53297159_53303719_53304626_53306236_53306398_53307680_53307906_53308685_53308855_53314376_53314517_53314822_53315045_53318211_53318341_53321525_53321631_53324019
transcript_54026.nnic	chr16	+	1077	3	NNC	ENSG00000177200.18	novel	720	2	NA	NA	19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGTTCAATATTTAT	53054231	True	NA	15	True	AATAAA	-28	NA	53055009	53122178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_53055078_53115143_53115274_53121299
transcript_54032.known	chr16	+	703	3	FSM	ENSG00000177200.18	ENST00000565442.1	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	12	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTATTACAATTTTTTC	53206375	True	NA	NA	False	ATTAAA	-17	NA	53208450	53222755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53208710_53209481_53209814_53222643
transcript_54036.known	chr16	+	720	2	FSM	ENSG00000177200.18	ENST00000561869.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAAATCATGTTAGAGTC	53054260	True	NA	NA	False	NA	NA	NA	53055038	53121980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53055078_53121299
transcript_54042.nic	chr16	+	605	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-48	12976	-48	-34	5prime_fragment	FALSE	canonical	1	3	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATGTTCTAAGTTAAAAGAG	53208359	False	NA	NA	False	AAAACA	-5	NA	53208402	53209779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_53208710_53209481
transcript_54043.nic	chr16	+	1132	2	ISM	ENSG00000177200.18	ENST00000565442.1	703	3	-48	12449	-48	493	5prime_fragment	FALSE	canonical	1	3	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CACTAATACCATATAAATCA	53208359	False	NA	NA	False	AATAAA	-45	NA	53208402	53210306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_53208710_53209481
transcript_54046.known	chr16	+	968	2	FSM	ENSG00000177200.18	ENST00000564582.2	968	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACTTGTTCAATATTTAT	53099169	False	NA	15	True	AATAAA	-28	NA	53099179	53122178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53099269_53121299
transcript_54048.known	chr16	-	2133	11	FSM	ENSG00000166971.17	ENST00000300245.8	2133	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	57.4251686980543	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGTTAAATAACATTTTCT	-53502187	True	NA	NA	False	AATAAA	-20	NA	53503244	53491378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53492523_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53501520_53501571_53503146
transcript_54051.known	chr16	-	1162	10	FSM	ENSG00000166971.17	ENST00000570004.5	1162	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	47.0909285909246	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGCCAGTGTTTTCCA	-53502166	True	NA	-1	True	AGTAAA	-17	NA	53503223	53492304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503117
transcript_54052.known	chr16	-	2384	10	FSM	ENSG00000166971.17	ENST00000394657.12	2384	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	29.6577181676807	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTGGAAGTTTTGTATTTA	-53502152	True	NA	1	True	ATTAAA	-19	NA	53503209	53491039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53492520_53492692_53492754_53494137_53494246_53494338_53494438_53494516_53494606_53495072_53495174_53495261_53495327_53498390_53498597_53500217_53500330_53503146
transcript_54075.known	chr16	-	2429	4	FSM	ENSG00000103494.16	ENST00000568653.7	2429	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	36.8811906291299	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTGTTTTTATTTTC	-53702619	True	NA	NA	False	AATAAA	-23	NA	53703847	53693311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53695459_53696150_53696296_53700638_53700731_53703802
transcript_54079.known	chr16	-	893	3	FSM	ENSG00000103494.16	ENST00000566096.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	8	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGATTTATGTGCAAAAA	NA	False	NA	NA	False	AAGAAA	-13	NA	53703938	53695630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_53696296_53700638_53700731_53703802
transcript_54082.nic	chr16	+	2234	10	NIC	ENSG00000140718.21	novel	1636	10	NA	NA	17	-500	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	101.112820498371	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTCCTTAAATTTGATTA	53698831	True	NA	NA	False	AATAAA	-14	NA	53704085	54040226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54039344_54039435_54039545
transcript_54084.known	chr16	+	1609	9	FSM	ENSG00000140718.21	ENST00000637001.1	1609	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	81.9618813839702	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTACTGTGATTGGATCT	53698814	True	NA	NA	False	ACTAAA	-19	NA	53704068	53979499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_53979370
transcript_54085.known	chr16	+	11573	9	FSM	ENSG00000140718.21	ENST00000471389.6	11573	9	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_8	22.1345318450606	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATTTATGCTTGGTGTTA	53698901	True	NA	NA	False	AATAAA	-14	NA	53704155	54121941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_53704230_53810139_53810218_53825863_53826492_53844154_53844299_53873785_53873866_53879843_53879988_53888831_53888952_53933984_53934110_54111761
transcript_54089.known	chr16	-	1883	5	FSM	ENSG00000245694.11	ENST00000660344.1	1883	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	26.6211851727154	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTTTGACTCACCCGGC	-54929019	False	NA	NA	False	ATTAAA	-14	NA	54929189	54917955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928769
transcript_54090.known	chr16	-	1866	5	FSM	ENSG00000245694.11	ENST00000559598.7	1866	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	30.0083321762473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGTGTAACCTTTTGGGGT	-54928538	True	NA	NA	False	TATAAA	-37	NA	54928827	54917969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928493
transcript_54091.known	chr16	-	1603	5	FSM	ENSG00000245694.11	ENST00000502066.7	1603	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	9.36416040016402	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTAACCTTTTGGGGTTT	-54928549	True	NA	NA	False	ATTAAA	-2	NA	54928838	54917967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920411_54923584_54923651_54925100_54925214_54928769
transcript_54092.known	chr16	-	641	5	FSM	ENSG00000245694.11	ENST00000688921.1	841	5	26	174	26	0	multi-exon	FALSE	canonical	2	9	junction_4	34.3110769285955	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTTCTATCAGAGTC	-54928408	False	NA	59	True	AAAAAG	-12	NA	54928578	54918862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54919210_54920297_54920328_54923584_54923651_54925100_54925214_54928493
transcript_54097.known	chr16	-	2042	2	FSM	ENSG00000245694.11	ENST00000658082.1	2042	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGTGTGTGT	NA	False	NA	NA	False	AATAAA	-19	NA	54874170	54851642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_54853569_54874054
transcript_54098.nnic	chr16	+	2803	14	NNC	ENSG00000087245.13	novel	3514	13	NA	NA	-29	0	intron_retention	FALSE	non_canonical	1	3	junction_1	100.206237035568	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGTGTTTGCCATCTGTTT	55478927	True	NA	16	True	AATAAA	-16	NA	55479168	55506237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_55479276_55479561_55479633_55482908_55483136_55484015_55484165_55485298_55485428_55485603_55485778_55488542_55488717_55489650_55489825_55491800_55491957_55493157_55493294_55496925_55497063_55498288_55498449_55502778_55502889_55505338
transcript_54099.known	chr16	+	5313	14	FSM	ENSG00000087253.13	ENST00000262134.10	5313	14	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_12	7.23649527777953	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTTCTTCTGGTGGGTT	55508303	True	NA	NA	False	ATTAAA	-17	NA	55509071	55586666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55545734_55545818_55549276_55549403_55550948_55551103_55574630_55574730_55579108_55579245_55582913
transcript_54104.nic	chr16	+	1215	9	NIC	ENSG00000087253.13	novel	5313	14	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_8	8.20060973342836	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCAATCTTCCTCATC	55508996	False	NA	6	True	AATAAA	-21	NA	55509009	55542028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_55509353_55525507_55525648_55528376_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55541837
transcript_54106.known	chr16	+	832	2	FSM	ENSG00000087253.13	ENST00000566911.1	832	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTTTCTGCAGTGGCATA	55508303	True	NA	NA	False	NA	NA	NA	55509071	55526058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_55509353_55525507
transcript_54107.known	chr16	+	1004	1	FSM	ENSG00000256812.2	ENST00000457326.3	1004	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGAGTGGTTTGTATA	NA	False	NA	NA	False	ATTAAA	-20	NA	55566683	55567687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_55566700_55567700
transcript_54108.known	chr16	+	616	7	FSM	ENSG00000087253.13	ENST00000564084.1	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	9.15908777602272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTCAATCTTCCTCATC	NA	False	NA	6	True	AATAAA	-21	NA	55528492	55542028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_55528595_55529834_55529948_55531913_55531975_55532823_55532883_55534442_55534478_55537577_55537633_55541837
transcript_54109.nnic	chr16	+	540	3	NNC	ENSG00000228695.10	novel	1704	14	NA	NA	32512	198	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	3	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	55793153	55794158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_55793239_55793407_55793481_55793776
transcript_54111.known	chr16	-	1835	14	FSM	ENSG00000198848.13	ENST00000361503.8	1835	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	2.21880078490092	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAAGATCCAGCCGGCCTT	NA	False	NA	NA	False	NA	NA	NA	55833186	55803048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_55803233_55803528_55803602_55806332_55806465_55810516_55810665_55810926_55811011_55812902_55813044_55816923_55816963_55819534_55819640_55820371_55820480_55821367_55821522_55823549_55823684_55826150_55826296_55828766_55828972_55833003
transcript_54114.nnic	chr16	-	553	3	NNC	ENSG00000198848.13	novel	659	4	NA	NA	6787	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2.5	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGCTTGTGTCTTGTAC	NA	False	NA	NA	False	AATAAA	-20	NA	55803868	55802850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_55803233_55803528_55803602_55803770
transcript_54115.known	chr16	+	930	2	FSM	ENSG00000087258.16	ENST00000569295.6	930	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTCTCCAGGCCTGTTTT	56189951	False	NA	NA	False	TTTAAA	-29	NA	56191546	56192696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56192354_56192573
transcript_54116.known	chr16	-	2540	18	FSM	ENSG00000125124.14	ENST00000682855.1	2540	18	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	45.6978946763926	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTTCCTAAATCTTGG	-56519188	True	NA	NA	False	AATAAA	-21	NA	56520024	56470402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56470615_56484760_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_54120.known	chr16	-	2704	17	FSM	ENSG00000125124.14	ENST00000245157.11	2704	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	37.0729327643498	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGTTGATTGATTATA	-56519188	True	NA	0	True	ATTAAA	-17	NA	56520024	56484384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_54124.known	chr16	-	2992	16	FSM	ENSG00000125124.14	ENST00000684020.1	2992	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	38.210295296774	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519232	True	NA	-10	True	ATTAAA	-45	NA	56520068	56484356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56500853_56501026_56501352_56501498_56502316_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_54126.known	chr16	-	2611	16	FSM	ENSG00000125124.14	ENST00000683020.1	2611	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	50.3245466944313	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAAATCAGAATTGCCCAT	-56519239	True	NA	-10	True	ATTAAA	-45	NA	56520075	56484356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56484868_56485589_56485739_56496966_56497080_56497742_56497881_56498436_56498569_56499777_56499908_56501352_56501498_56502316_56502457_56502672_56502809_56505949_56506037_56506119_56506225_56509956_56510035_56510858_56510922_56511158_56511285_56514452_56514681_56519745
transcript_54133.known	chr16	+	4587	13	FSM	ENSG00000087263.17	ENST00000566157.6	4587	13	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_6	38.2368350619603	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATGGTTTCTCTCTTTAT	56446464	True	NA	NA	False	GATAAA	-24	NA	56451553	56479104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56451767_56453262_56453409_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_54149.known	chr16	-	4393	7	FSM	ENSG00000167005.14	ENST00000300291.10	4393	7	0	0	0	0	multi-exon	TRUE	canonical	3	1092	junction_4	68.3073121187541	2085	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTGTGATTGTTTTGG	-56434239	True	NA	-6	True	AATAAA	-18	NA	56451332	56429132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56432734_56434330_56434446_56434753_56434830_56439656_56439747_56446625_56446690_56447788_56447990_56451086
transcript_54153.known	chr16	+	2415	13	FSM	ENSG00000087263.17	ENST00000336111.9	2415	13	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	161.65103017165	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAGAAGAAAA	56446434	True	NA	NA	False	NA	NA	NA	56451523	56477129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56451568_56453262_56453381_56458547_56458595_56462533_56462635_56466151_56466269_56466875_56466968_56467164_56467294_56467904_56468019_56470002_56470083_56470486_56470792_56474827_56474951_56475506_56475566_56476043
transcript_54154.known	chr16	+	586	5	FSM	ENSG00000087263.17	ENST00000562150.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	175.004285661809	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTACCTGGTTCCTCCCT	56446431	True	NA	NA	False	NA	NA	NA	56451520	56466203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56451761_56453262_56453409_56458547_56458595_56462533_56462635_56466151
transcript_54155.known	chr16	+	406	3	FSM	ENSG00000087250.9	ENST00000200691.5	406	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGCCAAGGACTGGTCTCT	56589505	True	NA	NA	False	AATAAA	-15	NA	56589527	56591085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56589622_56589869_56589936_56590839
transcript_54156.known	chr16	+	421	3	FSM	ENSG00000087250.9	ENST00000565838.5	421	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAGCATGAGCCAAGGACT	NA	False	NA	NA	False	AATAAA	-8	NA	56589073	56591078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56589190_56589869_56589936_56590839
transcript_54158.known	chr16	+	416	3	FSM	ENSG00000125148.7	ENST00000567300.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	735.5	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	56596264	False	NA	27	True	AATAAA	-16	NA	56608689	56609497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608805_56608991_56609058_56609262
transcript_54159.known	chr16	+	903	1	FSM	ENSG00000125148.7	ENST00000562017.1	903	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	56596169	True	NA	27	True	AATAAA	-16	NA	56608594	56609497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608600_56609500
transcript_54160.known	chr16	+	401	3	FSM	ENSG00000125148.7	ENST00000245185.6	401	3	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	44	18745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGTCTCTGGTTTCCTTT	56596158	True	NA	27	True	AATAAA	-16	NA	56608583	56609497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608684_56608991_56609058_56609262
transcript_54161.known	chr16	+	581	2	FSM	ENSG00000125148.7	ENST00000561491.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	1383	junction_1	0	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTCTGTCTCTGGTTTCC	56596180	True	NA	24	True	AATAAA	-13	NA	56608605	56609494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56608684_56608991
transcript_54162.known	chr16	+	688	2	FSM	ENSG00000125148.7	ENST00000563985.1	688	2	0	0	0	0	multi-exon	FALSE	canonical	3	1471	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAACAGCTTTGACTTG	56596158	True	NA	6	True	NA	NA	NA	56608583	56609476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56609058_56609262
transcript_54164.nnic	chr16	+	371	2	FSM	ENSG00000260549.3	ENST00000686205.1	388	2	5	12	5	-12	multi-exon	FALSE	canonical	3	5	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGGACCCTCCTTTCCTTT	56617309	True	NA	4	True	AATAAA	-16	NA	56617449	56618818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56617591_56618588
transcript_54168.known	chr16	+	332	2	FSM	ENSG00000169715.15	ENST00000568293.1	332	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56618145	True	NA	28	True	AATAAA	-18	NA	56625780	56627112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56625880_56626879
transcript_54169.known	chr16	+	746	2	FSM	ENSG00000169715.15	ENST00000330439.7	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56618145	True	NA	28	True	AATAAA	-18	NA	56625780	56627112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56625880_56626465
transcript_54170.known	chr16	+	398	3	FSM	ENSG00000205364.4	ENST00000379818.4	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	8.5	871	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTACTCTGTTCTTCTTTG	56632544	True	NA	6	True	AATAAA	-17	NA	56632658	56633981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56632760_56633339_56633406_56633750
transcript_54171.known	chr16	+	186	3	FSM	ENSG00000255986.6	ENST00000444023.4	186	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	4	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAACAGCTCTTCTCC	56635797	False	NA	-60	True	NA	NA	NA	56635817	56636943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56635846_56636438_56636505_56636851
transcript_54172.known	chr16	+	396	3	FSM	ENSG00000205362.11	ENST00000290705.12	396	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTGGTTTTCTTT	56638613	True	NA	4	True	AATAAA	-15	NA	56638665	56640087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56638767_56639263_56639330_56639858
transcript_54174.nnic	chr16	+	382	2	NIC	ENSG00000205362.11	novel	396	3	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCTCTGGTTTTCTTT	56638593	False	NA	4	True	AATAAA	-15	NA	56638613	56640087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_56638767_56639858
transcript_54175.known	chr16	+	150	3	FSM	ENSG00000205361.9	ENST00000486551.1	150	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGGGGCATTGGAGAAGTG	56643672	False	NA	NA	False	NA	NA	NA	56643724	56644765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56643753_56644110_56644177_56644709
transcript_54180.known	chr16	+	425	3	FSM	ENSG00000198417.7	ENST00000334350.7	425	3	0	0	0	0	multi-exon	FALSE	canonical	3	345	junction_2	28	10319	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTTCAGTTTCCCTT	56650422	True	NA	15	True	ATTAAA	-15	NA	56657958	56659303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56658087_56658674_56658741_56659072
transcript_54181.known	chr16	+	416	3	FSM	ENSG00000198417.7	ENST00000568475.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_2	193.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTTCAGTTTCCCTTAT	56650475	True	NA	17	True	ATTAAA	-17	NA	56658011	56659305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56658087_56658674_56658783_56659072
transcript_54188.known	chr16	-	305	2	FSM	ENSG00000125144.14	ENST00000569500.5	305	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	-56641999	True	NA	-11	True	ATTAAA	-14	NA	56668034	56666734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56666971_56667965
transcript_54189.known	chr16	-	406	3	FSM	ENSG00000125144.14	ENST00000444837.6	406	3	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_2	97.5	6960	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGGTTCCTGTTGTGT	-56642030	True	NA	-7	True	ATTAAA	-18	NA	56668065	56666730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56666971_56667311_56667378_56667965
transcript_54190.known	chr16	-	410	3	FSM	ENSG00000125144.14	ENST00000379811.4	410	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_2	225.5	4740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGTTCCTGTTGTGTT	-56642030	True	NA	-6	True	ATTAAA	-19	NA	56668065	56666729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_56666971_56667311_56667381_56667965
transcript_54205.known	chr16	+	397	3	FSM	ENSG00000205358.4	ENST00000332374.5	397	3	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	31	14485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667059	True	NA	14	True	ATTAAA	-14	NA	56669813	56671129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56669913_56670505_56670572_56670897
transcript_54206.known	chr16	+	697	2	FSM	ENSG00000205358.4	ENST00000569155.1	697	2	0	0	0	0	multi-exon	FALSE	canonical	3	739	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCGTTCTGGTTCCTGTT	56667085	True	NA	14	True	ATTAAA	-14	NA	56669839	56671129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56669913_56670505
transcript_54208.known	chr16	+	242	3	FSM	ENSG00000275691.2	ENST00000379816.5	242	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	2	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAGTAGAAAGTGTACAAA	56673377	False	NA	-92	True	NA	NA	NA	56676131	56677763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56676218_56677070_56677115_56677651
transcript_54209.nnic	chr16	+	409	2	NNC	ENSG00000275691.2	novel	242	3	NA	NA	-282	100	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGACTTTATTCTGGCTCA	56673095	False	NA	8	True	AATAAA	-21	NA	56675849	56677863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_56676047_56677651
transcript_54216.known	chr16	+	404	3	FSM	ENSG00000187193.9	ENST00000394485.5	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	2353	junction_2	272	17564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666575	True	NA	18	True	AATAAA	-14	NA	56682469	56684196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56682569_56683164_56683231_56683957
transcript_54217.known	chr16	+	549	3	FSM	ENSG00000187193.9	ENST00000564974.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1445	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTCTGGGCACCTCA	56666586	True	NA	18	True	AATAAA	-14	NA	56682480	56684196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56682569_56683164_56683387_56683957
transcript_54220.known	chr16	+	2875	20	FSM	ENSG00000102900.13	ENST00000564887.5	2875	20	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	345.041625013113	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTTTTCAACATTCTTT	NA	False	NA	15	True	AATAAA	-15	NA	56781657	56844764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56782215_56798475_56798539_56805503_56805633_56818663_56818739_56821503_56821594_56823706_56823847_56828976_56829110_56830527_56830686_56831841_56832008_56832294_56832389_56833214_56833407_56834127_56834255_56834369_56834443_56834733_56834779_56836600_56836718_56837607_56837727_56838951_56839070_56839520_56839605_56841704_56841834_56844498
transcript_54222.known	chr16	+	589	6	FSM	ENSG00000102900.13	ENST00000566315.5	589	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	779.848036478903	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAGACGCCCTTGACTTT	56716757	True	NA	-77	True	NA	NA	NA	56730128	56805597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56730212_56741779_56741818_56748233_56748427_56758537_56758656_56798475_56798539_56805503
transcript_54224.known	chr16	+	442	4	FSM	ENSG00000102900.13	ENST00000566678.1	442	4	0	0	0	0	multi-exon	FALSE	canonical	3	1544	junction_1	41.5291062589441	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTCTACTTGACTAGT	56748229	True	NA	12	True	AATAAA	-18	NA	56748348	56805686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56748427_56758537_56758656_56798475_56798539_56805503
transcript_54225.known	chr16	+	2834	23	FSM	ENSG00000102900.13	ENST00000569842.5	2834	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_21	433.013560759537	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCAACATTCTTTTATTT	56716758	True	NA	20	True	AATAAA	-20	NA	56730129	56844769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56730212_56748233_56748427_56758537_56758656_56798475_56798539_56805503_56805633_56818663_56818739_56821503_56821594_56823706_56823847_56828976_56829110_56830527_56830686_56831841_56832008_56832294_56832389_56833214_56833407_56834127_56834255_56834369_56834443_56834733_56834779_56836600_56836718_56837607_56837727_56838951_56839070_56839520_56839605_56841704_56841834_56842577_56842696_56844498
transcript_54230.known	chr16	+	1425	8	FSM	ENSG00000051108.15	ENST00000570273.5	1425	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	101.030203606725	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTGCATGTGTGT	56929757	True	NA	NA	False	NA	NA	NA	56932147	56943599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935400_56935476_56936686_56936818_56939236_56939360_56939894_56940089_56942131_56942238_56943125
transcript_54231.known	chr16	+	1862	8	FSM	ENSG00000051108.15	ENST00000300302.9	1862	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	89.3683046585926	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929756	True	NA	22	True	AATAAA	-22	NA	56932146	56943881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_54239.known	chr16	+	1782	7	FSM	ENSG00000051108.15	ENST00000379792.6	1782	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	105.454044756735	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCCTGTCATCCTAGCAG	56929769	True	NA	27	True	AATAAA	-27	NA	56932159	56943886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56936686_56936818_56939236_56939360_56939894_56940246_56942131_56942238_56943125
transcript_54240.known	chr16	+	798	6	FSM	ENSG00000051108.15	ENST00000565966.5	798	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	117.886385982436	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATCCTGGAGCCAATCAAA	56929756	True	NA	NA	False	NA	NA	NA	56932146	56940047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935241_56935313_56935400_56935476_56936686_56936818_56939236_56939360_56939894
transcript_54241.known	chr16	+	1388	6	FSM	ENSG00000051108.15	ENST00000344114.8	1388	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	122.384639559056	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGACTCCTGTCATCCT	56929756	True	NA	22	True	AATAAA	-22	NA	56932146	56943881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935403_56935476_56936686_56936818_56942131_56942238_56943125
transcript_54242.known	chr16	+	1125	4	FSM	ENSG00000051108.15	ENST00000569569.5	1125	4	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_2	6.97614984548545	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTCCCCCTTTTTCTAGTA	56929756	True	NA	NA	False	NA	NA	NA	56932146	56937413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234_56935313_56935400_56935476_56936686
transcript_54244.known	chr16	+	570	2	FSM	ENSG00000051108.15	ENST00000562914.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTGAGAGACTGTATG	56929751	True	NA	NA	False	AATAAA	-17	NA	56932141	56935554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_56932392_56935234
transcript_54271.known	chr16	-	1055	8	FSM	ENSG00000172775.17	ENST00000564108.5	1055	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	391.047990165203	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACACAGGGAGCTCCTCCC	-57178230	True	NA	NA	False	NA	NA	NA	57186032	57154278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57175538_57175591_57185820
transcript_5428.known	chr1	-	1107	6	FSM	ENSG00000117450.15	ENST00000447184.6	1107	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_5	2737.19976618441	3505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGGAATGGAACTGAATGA	-45293173	True	NA	NA	False	NA	NA	NA	45521938	45510913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521857
transcript_54292.known	chr16	-	1086	7	FSM	ENSG00000172775.17	ENST00000567439.5	1086	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	378.062458096836	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGCCTGCATCCTGTGT	-57178238	True	NA	-82	True	NA	NA	NA	57186040	57154199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57154508_57164000_57164066_57167092_57167227_57172250_57172373_57172775_57172875_57173727_57173870_57185824
transcript_54302.known	chr16	+	3586	15	FSM	ENSG00000159579.14	ENST00000537866.5	3586	15	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	59.2219967407312	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATCATGAATTATTGACTA	57182771	True	NA	5	True	AATAAA	-20	NA	57186332	57239957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57187051_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_54305.nic	chr16	+	2456	15	NIC	ENSG00000159579.14	novel	3586	15	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	75	junction_1	49.3738342667863	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTCTCTAATCAGTTGTA	57182725	True	NA	NA	False	AAAAAG	-8	NA	57186286	57239046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57186786_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_54306.known	chr16	+	3503	15	FSM	ENSG00000159579.14	ENST00000394420.9	3503	15	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	44.3020707121886	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAAGATTTCACAACTTTCA	57182767	True	NA	36	True	AATAAA	-21	NA	57186328	57240469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57186452_57204503_57205009_57208057_57208111_57209074_57209188_57212971_57213099_57213887_57213947_57216106_57216174_57216903_57217036_57220731_57220848_57221271_57221416_57227341_57227454_57230710_57230814_57231166_57231320_57235123_57235229_57238878
transcript_54312.known	chr16	+	1241	2	FSM	ENSG00000159579.14	ENST00000566352.1	1241	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAGAGTAAATATGGAGTG	57182749	True	NA	NA	False	GATAAA	-20	NA	57186310	57205269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57186786_57204503
transcript_54315.known	chr16	+	1969	6	FSM	ENSG00000102931.8	ENST00000219204.8	1969	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	12.0233106921513	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTTGTATTCTTTCTTTA	57243959	True	NA	49	True	AGTAAA	-35	NA	57245258	57253635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57245406_57246079_57246142_57248536_57248644_57249766_57249853_57250410_57250508_57252165
transcript_54316.known	chr16	-	1497	4	FSM	ENSG00000102934.10	ENST00000219207.10	1497	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.29983164553722	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGACAAGATGTTGGCAA	-57284344	True	NA	-10	True	AATAAA	-21	NA	57284672	57256096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57257030_57258461_57258585_57261896_57262071_57284405
transcript_54323.known	chr16	-	2016	9	FSM	ENSG00000005194.15	ENST00000567518.5	2016	9	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_7	317.792286722003	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	-57438364	True	NA	-18	True	AATAAA	-15	NA	57447419	57428186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439296_57440771_57440984_57447341
transcript_54325.known	chr16	-	2021	9	FSM	ENSG00000005194.15	ENST00000394391.9	2021	9	0	0	0	0	multi-exon	FALSE	canonical	3	962	junction_8	99.8620924074796	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCCTTGAAACTTGATT	-57438330	True	NA	-18	True	AATAAA	-15	NA	57447385	57428186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57429281_57430257_57430340_57431150_57431267_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_54333.known	chr16	-	1137	8	FSM	ENSG00000005194.15	ENST00000568940.5	1137	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	373.000957486324	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACCTCATGTTAAGAGAAG	-57438313	True	NA	NA	False	NA	NA	NA	57447368	57428937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57429281_57430257_57430340_57432486_57432561_57434043_57434213_57436655_57436733_57439181_57439335_57440771_57440984_57447341
transcript_54347.known	chr16	+	1630	9	FSM	ENSG00000088682.14	ENST00000262507.11	1630	9	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_5	31.5730799099486	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCATTGTGTAGTTAGTTT	57443509	True	NA	10	True	AATAAA	-17	NA	57447478	57461270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_54353.known	chr16	+	1482	8	FSM	ENSG00000088682.14	ENST00000567072.5	1482	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.542291584027	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATAAATATGTTTG	57443524	True	NA	-18	True	NA	NA	NA	57447493	57461242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57456503_57456627_57458245_57458351_57459564_57459721_57460050_57460105_57460588
transcript_54354.known	chr16	+	935	8	FSM	ENSG00000088682.14	ENST00000564655.5	935	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.4877488426878	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCATGGGTGCAGCAGTGA	57443512	True	NA	NA	False	NA	NA	NA	57447481	57460082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451027_57451209_57452800_57452937_57456503_57456647_57456930_57457016_57458245_57458351_57459564_57459721_57460050
transcript_54357.known	chr16	-	1848	8	FSM	ENSG00000125170.11	ENST00000569548.5	1848	8	0	0	0	0	multi-exon	TRUE	canonical	3	158	junction_1	15.3010603874239	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGAACAGCAGGTGGCTTC	-57479864	False	NA	NA	False	NA	NA	NA	57479874	57472876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_57473496_57473612_57473737_57473900_57474040_57474792_57474983_57475099_57475220_57475505_57475621_57475849_57475958_57479441
transcript_54364.known	chr16	+	882	6	FSM	ENSG00000088682.14	ENST00000567933.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	103.584940990474	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGATTGAAAAATGAGATG	57443527	True	NA	NA	False	NA	NA	NA	57447496	57460873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57459564_57459721_57460050_57460105_57460588
transcript_54370.known	chr16	+	581	5	FSM	ENSG00000088682.14	ENST00000565964.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	110.001136357767	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCCATCTACAACACAACAGA	57443471	True	NA	NA	False	NA	NA	NA	57447440	57459597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57447579_57451039_57451209_57452800_57452937_57458245_57458351_57459564
transcript_54371.known	chr16	+	1764	9	FSM	ENSG00000102978.13	ENST00000219252.10	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_7	41.0571248384492	2443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCGTCATCGTGCCA	57454103	True	NA	27	True	AATAAA	-18	NA	57462678	57472009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57462811_57463028_57463079_57465952_57466022_57466174_57466228_57469164_57469294_57469709_57469762_57469960_57470130_57470279_57470355_57470974
transcript_54375.nnic	chr16	+	1519	3	NIC	ENSG00000182885.17	novel	2317	11	NA	NA	189	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGGATGTATGAGTTTG	NA	False	NA	4	True	AATAAA	-16	NA	57679986	57689378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57680366_57680504_57680618_57688351
transcript_54377.nic	chr16	+	2665	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	4	0	intron_retention	FALSE	canonical	0	0	junction_16	87.8536304759891	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57730992	True	NA	11	True	ATTAAA	-13	NA	57735773	57757244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755789_57755918_57755991_57756067_57756355_57756473_57756813
transcript_54378.known	chr16	+	2618	20	FSM	ENSG00000140854.13	ENST00000379661.8	2618	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	87.8536304759891	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57730988	True	NA	11	True	ATTAAA	-13	NA	57735769	57757244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_57735856_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_54381.nic	chr16	+	2801	20	NIC	ENSG00000140854.13	novel	2618	20	NA	NA	-16	0	intron_retention	FALSE	canonical	0	0	junction_16	100.763071985228	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGTTTCCTTGTGGGGA	57731066	True	NA	11	True	ATTAAA	-13	NA	57735847	57757244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_57736117_57736977_57737284_57741686_57741818_57744393_57744512_57750826_57750928_57751260_57751303_57751640_57751725_57751939_57752056_57752529_57752602_57752777_57752929_57753076_57753268_57753388_57753520_57753944_57753996_57754929_57754998_57755118_57755239_57755344_57755495_57755840_57755918_57755991_57756067_57756355_57756473_57756813
transcript_54390.nic	chr16	+	428	4	ISM	ENSG00000159648.13	ENST00000441824.4	1434	8	8570	545	-67	0	3prime_fragment	FALSE	canonical	3	44	junction_1	1.4142135623731	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCAATTGTCTCTGTCTGTG	NA	False	NA	10	True	AATAAA	-24	NA	57985113	57987571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_57985268_57985481_57985547_57985908_57985942_57987395
transcript_54407.known	chr16	+	2248	7	FSM	ENSG00000103005.12	ENST00000219281.8	2248	7	0	0	0	0	multi-exon	FALSE	canonical	3	423	junction_2	22.5511763674438	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTTTTGGACTACTTGTA	57993428	True	NA	24	True	AATAAA	-22	NA	58001406	58021618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58014272_58014327_58017333_58017440_58018971_58019056_58020140
transcript_54411.known	chr16	+	1212	6	FSM	ENSG00000103005.12	ENST00000539737.6	1212	6	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_3	182.564618697052	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTCTCTCTTCCTCTCC	57993426	True	NA	NA	False	NA	NA	NA	58001404	58020634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58017333_58017440_58018971_58019056_58020140
transcript_54412.known	chr16	+	1751	4	FSM	ENSG00000103005.12	ENST00000563149.1	1751	4	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_3	213.729319987273	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTAGCTGAGCCTGAC	57993441	True	NA	7	True	AATAAA	-27	NA	58001419	58013558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58001582_58002478_58002646_58009928_58010113_58012320
transcript_54417.known	chr16	-	1281	6	FSM	ENSG00000070761.8	ENST00000262498.8	1281	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	23.7116005364463	1337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCCTAGTTTGTCTTT	-58123309	True	NA	0	True	AATAAA	-24	NA	58129381	58113591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58114031_58114809_58114921_58115268_58115458_58116040_58116153_58116871_58116952_58129031
transcript_54418.known	chr16	-	1605	5	FSM	ENSG00000070761.8	ENST00000562622.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	9.31396800509858	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGGTTTGTAAATTTGTT	-58123299	True	NA	-14	True	AATAAA	-10	NA	58129371	58113605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58114031_58114809_58115458_58116040_58116153_58116871_58116952_58129031
transcript_54419.known	chr16	-	1887	12	FSM	ENSG00000070770.10	ENST00000262506.8	1887	12	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	29.8738394082805	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGGAGAGTTTTCAGTA	-58187785	True	NA	NA	False	AATAAA	-16	NA	58198106	58157906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58158354_58164053_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58184259_58184311_58186754_58186857_58196732_58196845_58197632
transcript_54421.known	chr16	-	1364	10	FSM	ENSG00000070770.10	ENST00000565188.2	1364	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	56.3095500967533	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATGGAGAGTTTTCAGTA	-58187415	False	NA	NA	False	AATAAA	-16	NA	58197736	58157906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58158354_58164053_58164148_58165559_58165709_58166583_58166685_58167206_58167309_58167684_58167796_58168609_58168694_58174450_58174511_58196732_58196845_58197632
transcript_54423.known	chr16	+	5272	9	FSM	ENSG00000103021.10	ENST00000219299.8	5272	9	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	16.293691263799	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	58248930	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_54427.known	chr16	+	5110	8	FSM	ENSG00000103021.10	ENST00000443128.6	5110	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	25.4269662414708	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCTGTATATATGTATTT	58248930	True	NA	NA	False	AATAAA	-18	NA	58249935	58283836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58250116_58252726_58252854_58258367_58258524_58259853_58259935_58262384_58262541_58267478_58267587_58278481_58278638_58279690
transcript_54430.nnic	chr16	+	894	6	NNC	ENSG00000103021.10	novel	5272	9	NA	NA	-3	-2119	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	29.3938769133981	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGAGGTTTGTGGTGATTTGT	58248927	True	NA	NA	False	AATAAA	-16	NA	58249932	58260421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_58250116_58252726_58252854_58253997_58254160_58258367_58258524_58259853_58259935_58260236
transcript_54434.known	chr16	+	1728	4	FSM	ENSG00000181938.14	ENST00000426538.6	1728	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAAAAGCTGTCAGGGAGT	58391140	True	NA	NA	False	NA	NA	NA	58392393	58405481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58392788_58395101_58395219_58403097_58403332_58404498
transcript_54436.known	chr16	+	2200	3	FSM	ENSG00000181938.14	ENST00000318129.6	2200	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTGCTTGTGTGGTA	58391217	True	NA	18	True	AATACA	-22	NA	58392470	58406147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58392788_58403097_58403332_58404498
transcript_54438.known	chr16	+	1932	2	FSM	ENSG00000181938.14	ENST00000328514.11	1932	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATGTTCTGTACAAGTGC	58391140	True	NA	18	True	AATAAA	-19	NA	58392393	58406036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58392788_58404498
transcript_54440.known	chr16	-	655	1	FSM	ENSG00000276131.1	ENST00000613275.1	655	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	205	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTAAGTCCGACCCTTTC	-58392637	True	NA	-11	True	AATAAA	-24	NA	58392807	58392152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58392200_58392800
transcript_54441.known	chr16	+	1375	15	FSM	ENSG00000103034.15	ENST00000356752.8	1375	15	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	18.660363974839	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGGTGTTTTAAGGGGCTC	58499705	True	NA	NA	False	NA	NA	NA	58500142	58511735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58500270_58500987_58501078_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_54442.known	chr16	+	3265	14	FSM	ENSG00000103034.15	ENST00000566192.5	3265	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.0231532061166	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGCTTATGTGCTCATT	NA	False	NA	4	True	ATTAAA	-16	NA	58500046	58513619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58500270_58503797_58503904_58504153_58504275_58504358_58504422_58504588_58504650_58506386_58506474_58506557_58506615_58506911_58507016_58507807_58507865_58507947_58508000_58508961_58509010_58509153_58509190_58509300_58509353_58511421
transcript_54450.nic	chr16	-	474	3	ISM	ENSG00000125107.19	ENST00000568158.1	496	4	-81	23873	-11	-21	5prime_fragment	FALSE	canonical	3	18	junction_1	11	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAATTATTTGAAATATAAA	-58629886	False	NA	-5	True	AATAAA	-19	NA	58629896	58623246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_58623410_58624652_58624795_58629727
transcript_54453.known	chr16	-	304	2	FSM	ENSG00000125107.19	ENST00000569263.1	304	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGGAAGTATTTTCT	-58612854	True	NA	16	True	AATAAA	-40	NA	58629847	58623225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58623410_58629727
transcript_54454.known	chr16	-	4999	31	FSM	ENSG00000125107.19	ENST00000441024.6	4999	31	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_12	74.7638430140012	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATATCTGACAATCTCA	-58612845	True	NA	NA	False	AATAAA	-20	NA	58629838	58543326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58543904_58545360_58545492_58546320_58546499_58546671_58546750_58547185_58547297_58547565_58547683_58549718_58549899_58551131_58551273_58551588_58551820_58553781_58553861_58555250_58555538_58555783_58555909_58556846_58556994_58558472_58558675_58560211_58560363_58574608_58574761_58575006_58575130_58576462_58576583_58578698_58578940_58580632_58580761_58581344_58581516_58582792_58582904_58583055_58583183_58585337_58585507_58586544_58586749_58587200_58587256_58587344_58587414_58587779_58587879_58588798_58588907_58599235_58599512_58629727
transcript_54455.known	chr16	+	2042	9	FSM	ENSG00000103037.12	ENST00000310682.6	2042	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	29.7814959328775	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGGGGGAAAAGGATAT	58513003	True	NA	NA	False	TTTAAA	-39	NA	58515478	58519662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_58515565_58515790_58515881_58515952_58516098_58516201_58516344_58516477_58516673_58516807_58516929_58518050_58518232_58518400_58518544_58518723
transcript_54472.known	chr16	-	2421	10	FSM	ENSG00000125166.13	ENST00000245206.10	2421	10	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_5	56.9151415120206	3975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTCTACTAAGTTATC	-58715996	True	NA	-17	True	AATAAA	-17	NA	58734316	58707130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58708294_58709416_58709568_58716013_58716180_58716662_58716814_58718195_58718301_58718526_58718689_58719195_58719256_58722149_58722279_58723745_58723903_58734139
transcript_54488.known	chr16	-	987	3	FSM	ENSG00000125166.13	ENST00000492378.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	1270	junction_2	7	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACTAGTAGTAATCCTGA	-58716015	True	NA	NA	False	AATAAA	-29	NA	58734335	58721644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_58722279_58723745_58723903_58734139
transcript_54492.nnic	chr16	-	1102	4	NNC	ENSG00000261310.1	novel	565	3	NA	NA	33	-25416	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.471404520791032	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATGTGTCAAGATGTTTC	-60523127	True	NA	NA	False	AATAAA	-25	NA	60523217	60512234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_60512963_60515032_60515127_60521730_60521799_60523005
transcript_54494.known	chr16	-	565	3	FSM	ENSG00000261310.1	ENST00000567862.1	565	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCACCTAACTCAATTCTA	-60523160	True	NA	NA	False	AGTAAA	-26	NA	60523250	60486818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_60487071_60521730_60521799_60523005
transcript_54496.known	chr16	-	566	1	FSM	ENSG00000224631.4	ENST00000591758.1	566	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	187256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAAGAAGCTATCAACCT	NA	False	NA	NA	False	AATAAA	-30	NA	61055964	61055398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61055400_61056000
transcript_54497.known	chr16	-	3986	9	FSM	ENSG00000150394.14	ENST00000584337.5	3986	9	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	3.73329613076702	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACTCTTTCTCTGAAGAAA	-62036182	True	NA	NA	False	AATAAA	-43	NA	62036402	61725165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_54508.nnic	chr16	+	1242	3	Antisense	novelGene_ENSG00000150394.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTAGTTGCAGGTGCTCTG	61872651	False	NA	NA	False	AATAAA	-17	NA	61872664	61882902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_61873058_61875265_61875606_61882393
transcript_54515.known	chr16	-	3728	13	FSM	ENSG00000150394.14	ENST00000299345.10	3728	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.23012109483773	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTTTTCTATAAAATACAT	NA	False	NA	NA	False	AATAAA	-29	NA	62036835	61647241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61647889_61653881_61654102_61655469_61655722_61713840_61713959_61727093_61727216_61789345_61789483_61817478_61817733_61820925_61821114_61825011_61825180_61857118_61857239_61901178_61901474_62021151_62021603_62036079
transcript_54519.nnic	chr16	+	460	2	Antisense	novelGene_ENSG00000150394.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTCTTACCTTAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-26	NA	62036546	62037441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_62036778_62037212
transcript_54521.nnic	chr16	+	1211	2	Antisense	novelGene_ENSG00000150394.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCCAGATTGTTAGACA	NA	False	NA	NA	False	NA	NA	NA	62036546	62038192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_62036778_62037212
transcript_54523.known	chr16	-	539	2	FSM	ENSG00000150394.14	ENST00000577228.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGATGTAACTGGAGATATC	-61918584	True	NA	NA	False	NA	NA	NA	61918714	61901391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_61901474_61918257
transcript_54528.known	chr16	-	554	2	FSM	ENSG00000260668.1	ENST00000569153.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAACTGTCAAAACCATAA	NA	False	NA	NA	False	AAAAAG	-6	NA	64261239	64260569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_64261020_64261135
transcript_54538.nnic	chr16	-	875	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-303	5	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	322.5	291	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235236	65229840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65230206_65233014_65233174_65234885
transcript_54540.nnic	chr16	-	921	3	FSM	ENSG00000260834.2	ENST00000691011.1	696	3	-220	-5	-220	5	multi-exon	FALSE	canonical	3	371	junction_2	268.5	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235153	65229840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_65230206_65233014_65233303_65234885
transcript_54549.nnic	chr16	-	414	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-85	-10	at_least_one_novel_splicesite	FALSE	canonical	3	40	junction_1	13	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65235003	False	NA	-29	True	AATAAA	-17	NA	65235018	65227904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65228022_65228302_65228467_65234885
transcript_54551.nnic	chr16	-	386	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-119	-10	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	91.5	482	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65235037	False	NA	-29	True	AATAAA	-17	NA	65235052	65227904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65228022_65233014_65233117_65234885
transcript_54552.nnic	chr16	-	487	3	NNC	ENSG00000260834.2	novel	146	2	NA	NA	-163	-10	at_least_one_novel_splicesite	FALSE	canonical	3	263	junction_2	193.5	334	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65235081	True	NA	-29	True	AATAAA	-17	NA	65235096	65227904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65228022_65233014_65233174_65234885
transcript_54553.nnic	chr16	-	571	3	NIC	ENSG00000260834.2	novel	146	2	NA	NA	-118	-10	combination_of_known_splicesites	FALSE	canonical	3	371	junction_2	139.5	877	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAATAACAAGTGAACACAT	-65235036	False	NA	-29	True	AATAAA	-17	NA	65235051	65227904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_65228022_65233014_65233303_65234885
transcript_54556.nnic	chr16	-	634	3	NNC	ENSG00000260834.2	novel	696	3	NA	NA	-119	5	at_least_one_novel_splicesite	FALSE	canonical	3	467	junction_2	220.5	632	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-65235037	False	NA	-101	True	AATAAA	-22	NA	65235052	65229840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_65230206_65233014_65233117_65234885
transcript_54561.known	chr16	-	146	2	FSM	ENSG00000260834.2	ENST00000565901.1	146	2	0	0	0	0	multi-exon	FALSE	canonical	3	1283	junction_1	0	1258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAACACATGTGTACAGCA	-65234889	False	NA	-19	True	AATAAA	-27	NA	65234904	65227894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_65228022_65234885
transcript_54562.nnic	chr16	-	633	2	NIC	ENSG00000260834.2	novel	696	3	NA	NA	-220	5	combination_of_known_splicesites	FALSE	canonical	3	1386	junction_1	0	2539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	-101	True	AATAAA	-22	NA	65235153	65229840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_65230206_65234885
transcript_54569.nnic	chr16	+	1440	3	NNC	ENSG00000260364.1	novel	781	5	NA	NA	92	887	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTCTTATGTCT	65233064	True	NA	NA	False	ATTAAA	-18	NA	65233147	65433707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_65233404_65371096_65371186_65432612
transcript_54571.nnic	chr16	+	676	3	NNC	ENSG00000260364.1	novel	781	5	NA	NA	242	22631	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGTGATAATCTGTCTT	65233214	False	NA	NA	False	ATTAAA	-13	NA	65233297	65455451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_65233404_65371096_65371186_65454970
transcript_54577.known	chr16	+	2147	2	FSM	ENSG00000246898.2	ENST00000499966.2	2155	2	8	0	8	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGAAAAAATTTATAAG	66408511	True	NA	NA	False	NA	NA	NA	66408523	66412135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66408815_66410279
transcript_54578.known	chr16	-	2745	9	FSM	ENSG00000166548.17	ENST00000527800.6	2745	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_8	4.79420222769128	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGTCCTGAAGCTTTGGA	-66549732	True	NA	0	True	AATAAA	-16	NA	66549856	66510743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66512067_66513730_66513812_66517135_66517216_66517788_66517878_66528993_66529068_66531379_66531470_66536963_66537018_66541878_66541954_66548977
transcript_54581.known	chr16	+	656	4	FSM	ENSG00000217555.13	ENST00000264001.9	656	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_2	90.149258948085	984	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	66550071	True	NA	31	True	ATTAAA	-21	NA	66552575	66566068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189_66558349_66563121_66563218_66565885
transcript_54582.known	chr16	+	678	4	FSM	ENSG00000254788.7	ENST00000616804.5	678	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	98.7600909049579	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTTCCTCTCGTTGC	66550174	True	NA	NA	False	CATAAA	-27	NA	66552678	66579135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189_66558349_66577103_66577203_66578830
transcript_54583.known	chr16	+	571	3	FSM	ENSG00000217555.13	ENST00000345436.8	571	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	54.5	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189_66558349_66565885
transcript_54584.known	chr16	+	508	3	FSM	ENSG00000217555.13	ENST00000351137.8	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	67	2025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66563121_66563218_66565885
transcript_54585.nic	chr16	+	555	3	NIC	ENSG00000217555.13	novel	656	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_1	168.5	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTTCTGCAGTTATTT	66550063	True	NA	31	True	ATTAAA	-21	NA	66552567	66566068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_66552794_66563071_66563218_66565885
transcript_54586.known	chr16	+	585	3	FSM	ENSG00000254788.7	ENST00000527729.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGCTTCCTCTCGTTGC	66550108	True	NA	NA	False	CATAAA	-27	NA	66552612	66579135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66577103_66577203_66578830
transcript_54587.known	chr16	+	412	2	FSM	ENSG00000217555.13	ENST00000362093.4	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCTGCAGTTATTTTAAC	66550064	True	NA	35	True	ATTAAA	-25	NA	66552568	66566072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66565885
transcript_54588.known	chr16	+	564	2	FSM	ENSG00000217555.13	ENST00000526149.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCACAGAGCATAAGTTCT	66550068	True	NA	NA	False	NA	NA	NA	66552572	66558532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66552794_66558189
transcript_54589.known	chr16	-	4326	13	FSM	ENSG00000135720.13	ENST00000258198.7	4326	13	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_9	29.6436005835249	704	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGTGGCTTTCTTTAT	-66744099	True	NA	-3	True	AATAAA	-23	NA	66751609	66720892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66723823_66725827_66725945_66727687_66727806_66728200_66728243_66729039_66729100_66730111_66730224_66732338_66732475_66734217_66734312_66736074_66736245_66742437_66742669_66749196_66749314_66751272_66751347_66751484
transcript_54597.known	chr16	-	1909	21	FSM	ENSG00000159593.15	ENST00000379463.6	1909	21	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_20	328.570764828522	535	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATGTAGTCTTGTTCTT	-66814340	True	NA	NA	False	AATAAA	-17	NA	66830976	66802879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66827979_66828078_66830846
transcript_54608.known	chr16	-	1654	19	FSM	ENSG00000159593.15	ENST00000394074.6	1654	19	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_18	265.255851333513	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTTTCTTAATAAACATT	-66814319	True	NA	NA	False	NA	NA	NA	66830955	66802911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_54627.known	chr16	-	1460	8	FSM	ENSG00000159593.15	ENST00000567743.5	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	389.873762928987	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTGAACACAGCACT	-66814332	True	NA	NA	False	AATGAA	-43	NA	66830968	66816613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66830846
transcript_54628.known	chr16	+	1518	7	FSM	ENSG00000168748.14	ENST00000338437.7	1518	7	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_3	2.80871659105879	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAATTGAGTGCTTGTGC	66844299	True	NA	NA	False	AATAAA	-22	NA	66844413	66854147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66844528_66847029_66847228_66850540_66850660_66851462_66851559_66851663_66851727_66852711_66852868_66853375
transcript_54632.known	chr16	-	1813	20	FSM	ENSG00000159593.15	ENST00000290810.8	1813	20	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_19	81.3157383750478	4330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTAGTCTTGTTCTTTG	-66814340	True	NA	NA	False	AATAAA	-19	NA	66830976	66802877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66803119_66805776_66805827_66805911_66806027_66808520_66808614_66808988_66809076_66810373_66810414_66810696_66810773_66813563_66813698_66813786_66813847_66816580_66816673_66816964_66817029_66817424_66817488_66818527_66818638_66821449_66821560_66823226_66823307_66823528_66823601_66824854_66824886_66826522_66826584_66826676_66826781_66830846
transcript_54635.known	chr16	+	6997	2	FSM	ENSG00000172840.7	ENST00000311765.4	6997	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATTTAGTTTCTTTTGG	66875756	True	NA	4	True	ATTAAA	-24	NA	66880514	66891101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66880641_66884230
transcript_54639.known	chr16	-	668	5	FSM	ENSG00000166595.12	ENST00000422424.7	668	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	577.952149835953	11866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCCCAGCATGCCTTGGTG	-66923482	True	NA	-11	True	AATAAA	-16	NA	66934402	66932064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_54640.known	chr16	-	696	6	FSM	ENSG00000166595.12	ENST00000567511.1	696	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	672.114990161654	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCCCAGCATGCCTTGG	-66923442	True	NA	-13	True	AATAAA	-14	NA	66934362	66932066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66932301_66932480_66932551_66932779_66932826_66933613_66933740_66933986_66934067_66934222
transcript_54641.known	chr16	-	718	4	FSM	ENSG00000166595.12	ENST00000563490.1	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	1225	junction_1	85.7217721598324	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCATACTGGTATC	-66923497	True	NA	-132	True	NA	NA	NA	66934417	66932185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_66932301_66932779_66932826_66933613_66933740_66933986
transcript_54642.known	chr16	+	2871	12	FSM	ENSG00000172831.14	ENST00000317091.10	2871	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	11.3202809298435	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCTGTCTGCCTCTCCCC	66935504	False	NA	6	True	AATAAA	-18	NA	66935515	66945096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66935712_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_54646.known	chr16	+	3391	12	FSM	ENSG00000172831.14	ENST00000568470.6	3391	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	25.7726871893227	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	66932931	True	NA	NA	False	NA	NA	NA	66934470	66944306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_66935977_66938036_66938242_66939216_66939359_66940221_66940356_66940436_66940696_66941123_66941223_66941505_66941647_66941767_66941849_66942104_66942250_66942647_66942786_66943298_66943372_66943838
transcript_54648.known	chr16	+	584	6	FSM	ENSG00000067955.15	ENST00000561924.6	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	218.611619087367	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATACACATTGCTTCTAG	67025977	True	NA	NA	False	NA	NA	NA	67029115	67098811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_54650.known	chr16	+	3134	6	FSM	ENSG00000067955.15	ENST00000290858.11	3134	6	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_5	107.919229055808	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGGTCTTGGCTCTTTCTT	67026010	True	NA	72	True	AATAAA	-18	NA	67029148	67101058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67029486_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_54651.nic	chr16	+	804	4	ISM	ENSG00000067955.15	ENST00000561924.6	584	6	-21	31585	-21	264	5prime_fragment	FALSE	canonical	3	32	junction_1	250.787205060829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTGGACGTGGTGGCTC	67029062	False	NA	NA	False	GATAAA	-33	NA	67029094	67067226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_67029150_67029726_67029814_67036638_67036756_67066681
transcript_54652.known	chr16	+	2818	6	FSM	ENSG00000067955.15	ENST00000651988.1	2818	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	230.062947907741	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACTTCTGTGTAGTAA	67028970	False	NA	49	True	NA	NA	NA	67028983	67101035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67029028_67029726_67029814_67036638_67036756_67066681_67066799_67082212_67082340_67098709
transcript_54654.known	chr16	+	1353	17	FSM	ENSG00000125149.12	ENST00000569600.5	1353	17	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	39.8134320926996	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACCACCACCCATGCCC	67107459	True	NA	NA	False	NA	NA	NA	67109962	67147131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67109990_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_54659.nic	chr16	+	2801	17	NIC	ENSG00000125149.12	novel	1353	17	NA	NA	2	0	intron_retention	FALSE	canonical	3	63	junction_1	32.0134249183058	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	67107439	True	NA	14	True	NA	NA	NA	67109942	67148544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_67110005_67110118_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_5466.known	chr1	-	945	6	FSM	ENSG00000117450.15	ENST00000319248.13	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	6804	junction_5	235.885056754344	122459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	-45293119	True	NA	-29	True	ATTAAA	-13	NA	45521884	45511050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521828
transcript_54663.known	chr16	+	2917	16	FSM	ENSG00000125149.12	ENST00000219139.8	2917	16	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_11	16.416252109825	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGGGTATTGGTTTTTTG	67107437	True	NA	14	True	NA	NA	NA	67109940	67148544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67110240_67120111_67120195_67125958_67126043_67131285_67131330_67132445_67132526_67132816_67132912_67134167_67134266_67134354_67134468_67139983_67140118_67140510_67140595_67144293_67144377_67144833_67144878_67145375_67145420_67145569_67145629_67146277_67146351_67147044
transcript_54665.known	chr16	+	1592	6	FSM	ENSG00000140939.14	ENST00000564053.5	1592	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.403845442912	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGGGAGGGTGACTTCTCT	67170410	True	NA	NA	False	NA	NA	NA	67170539	67175485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67170575_67171151_67171458_67173861_67174047_67174161_67174465_67174620_67174945_67175046
transcript_54669.known	chr16	+	1394	4	FSM	ENSG00000140939.14	ENST00000268605.11	1394	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	8.73053390247253	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	NA	False	NA	21	True	AATATA	-30	NA	67170496	67175735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67170575_67174161_67174465_67174620_67174945_67175046
transcript_5467.known	chr1	+	1510	5	FSM	ENSG00000132763.15	ENST00000616135.1	1510	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.33853912601566	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATACAAACTACAAAAGATT	45498418	True	NA	18	True	AATAAA	-28	NA	45500340	45511065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45500414_45507355_45507551_45508211_45508365_45508795_45509348_45510528
transcript_54671.known	chr16	+	1351	4	FSM	ENSG00000140939.14	ENST00000568146.1	1351	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.25967446224258	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCGTTTCTGAGTTTTA	67173915	False	NA	21	True	AATATA	-30	NA	67174001	67175735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67174047_67174161_67174455_67174620_67174945_67175046
transcript_54672.known	chr16	+	752	4	FSM	ENSG00000140939.14	ENST00000566871.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.78888096369861	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCCACGATTCTGGCT	67173864	True	NA	13	True	AATAAA	-27	NA	67173950	67175199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67174047_67174161_67174341_67174620_67174945_67175046
transcript_54673.known	chr16	+	2110	10	FSM	ENSG00000205250.9	ENST00000379378.8	2110	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	312.491580133483	505	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGATGTGGTTCTTTGG	67186482	True	NA	21	True	AATAAA	-18	NA	67192154	67198918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67192363_67192760_67192871_67193008_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_54676.known	chr16	+	2615	8	FSM	ENSG00000205250.9	ENST00000567007.5	2615	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	349.192479522544	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGATGTGGTTCTTTG	67186512	True	NA	20	True	AATAAA	-17	NA	67192184	67198917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67193171_67193471_67193516_67194397_67194460_67194685_67194981_67195781_67196007_67197598_67197647_67197866_67197912_67198007
transcript_54677.known	chr16	+	2486	20	FSM	ENSG00000102890.16	ENST00000393997.8	2486	20	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	12.4375448049695	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGAGCCAGCTCTGTA	67198089	True	NA	6	True	AATAAA	-20	NA	67199130	67204004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67199405_67199552_67199594_67199683_67199757_67199950_67200002_67200191_67200362_67200450_67200551_67200656_67200809_67200889_67200969_67201384_67201436_67201519_67201643_67201741_67201874_67201976_67202079_67202175_67202285_67202396_67202534_67202626_67202791_67202891_67203005_67203118_67203224_67203326_67203410_67203496_67203584_67203664
transcript_5468.known	chr1	-	1234	6	FSM	ENSG00000117450.15	ENST00000262746.5	1234	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2914.58042263376	6579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTAGGAAGCATATTATT	-45293173	True	NA	-14	True	ATTAAA	-28	NA	45521938	45511035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514996_45515653_45515808_45518937_45519055_45521608
transcript_54685.known	chr16	+	776	6	FSM	ENSG00000168701.19	ENST00000304800.14	776	6	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	55.3953066604022	5556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223971	True	NA	25	True	AATAAA	-15	NA	67227129	67229278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_54687.known	chr16	+	775	6	FSM	ENSG00000168701.19	ENST00000562235.5	775	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	241.811165995287	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67223998	True	NA	25	True	AATAAA	-15	NA	67227156	67229278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228658_67228796_67228882_67228975
transcript_54689.known	chr16	+	887	6	FSM	ENSG00000168701.19	ENST00000563953.5	887	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	253.17630220856	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGGCTTAGAATGTGGCTG	67223961	True	NA	9	True	NA	NA	NA	67227119	67229262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227718_67227932_67228354_67228415_67228494_67228632_67228796_67228882_67228975
transcript_5469.known	chr1	-	609	5	FSM	ENSG00000117450.15	ENST00000372079.1	609	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3130.91336513804	2852	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGATGAGTCTTTATTTT	-45293089	True	NA	-29	True	ATTAAA	-13	NA	45521854	45511050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45511415_45514506_45514638_45514872_45514896_45518989_45519055_45521828
transcript_54693.known	chr16	+	832	5	FSM	ENSG00000168701.19	ENST00000565201.1	832	5	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_4	61.9273768215641	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67224009	True	NA	25	True	AATAAA	-15	NA	67227167	67229278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228632_67228796
transcript_54697.known	chr16	+	915	5	FSM	ENSG00000168701.19	ENST00000567193.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_1	35.6467039149484	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGGGTATACTTATACTC	67223944	True	NA	-28	True	NA	NA	NA	67227102	67229225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494_67228882_67228975
transcript_54702.known	chr16	+	698	4	FSM	ENSG00000168701.19	ENST00000561586.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	601	junction_1	37.853518844209	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACCGTTTCTCTTGTAGG	67223986	True	NA	NA	False	NA	NA	NA	67227144	67228956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227835_67227932_67228354_67228415_67228494
transcript_54704.known	chr16	+	518	4	FSM	ENSG00000168701.19	ENST00000564087.2	518	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	320.100331493459	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCAGAGTGAGTGTCCC	67224054	True	NA	NA	False	NA	NA	NA	67227212	67228622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67227225_67227613_67227932_67228354_67228415_67228494
transcript_54705.known	chr16	+	514	2	FSM	ENSG00000168701.19	ENST00000564649.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	622	junction_1	0	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGATGGCTGTGTGGGTGA	67228660	False	NA	25	True	AATAAA	-15	NA	67228670	67229278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67228882_67228975
transcript_54706.known	chr16	-	3813	22	FSM	ENSG00000135723.14	ENST00000258201.9	3813	22	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_18	26.6719382544545	540	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTTTCTCTTCTTTCAGG	-67245084	True	NA	-1	True	AATAAA	-20	NA	67247481	67229388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67229719_67229792_67229991_67230065_67230229_67230313_67230507_67230600_67230792_67231187_67231350_67231429_67231550_67231636_67231820_67232038_67232195_67233656_67234268_67234356_67234473_67236556_67236734_67236965_67237115_67237238_67237383_67237474_67237570_67237656_67237769_67238033_67238129_67238201_67238308_67238379_67238448_67238902_67238968_67239347_67239455_67247209
transcript_54707.nnic	chr16	-	1079	3	NNC	ENSG00000168676.11	novel	423	2	NA	NA	-3	1008	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTTTCTTTCCTAATTT	-67326742	True	NA	NA	False	ATTAAA	-16	NA	67326763	67319637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_67320361_67320588_67320886_67326704
transcript_54709.known	chr16	-	1410	4	FSM	ENSG00000159713.11	ENST00000562206.1	1410	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAACCCAGACCTCAATAAA	-67393458	False	33	-37	True	NA	NA	NA	67393491	67389845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67390363_67390478_67390633_67390923_67391118_67392946
transcript_54710.known	chr16	-	1021	4	FSM	ENSG00000159713.11	ENST00000393957.7	1021	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCCTGGTTGACGATGA	-67393465	False	33	0	True	AATAAA	-18	NA	67393498	67389808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67390363_67390478_67390633_67390923_67391118_67393379
transcript_54711.nnic	chr16	+	1679	5	NNC	ENSG00000176387.7	novel	540	4	NA	NA	-163	0	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	74.1046557241851	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	67430472	False	NA	19	True	AATAAA	-25	NA	67430488	67437553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67430665_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_54712.nic	chr16	+	1676	5	NIC	ENSG00000176387.7	novel	540	4	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_1	73.6796274420548	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGCAGGTGCTGTTTGGA	67430340	True	NA	19	True	AATAAA	-25	NA	67430606	67437553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_67430780_67435627_67435841_67435956_67436143_67436248_67436387_67436587
transcript_54719.known	chr16	-	1636	8	FSM	ENSG00000159720.13	ENST00000290949.8	1636	8	0	0	0	0	multi-exon	TRUE	canonical	3	371	junction_6	22.2435498561736	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTGCTGTCTCGTTTAG	-67475058	True	NA	-5	True	AATAAA	-21	NA	67481157	67438018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67444527_67444707_67453543_67453716_67480956
transcript_54723.known	chr16	-	905	6	FSM	ENSG00000159720.13	ENST00000565835.5	905	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	159.900719197882	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACCAAGGATGGACGAAGA	-67474980	True	NA	NA	False	GGGGCT	-13	NA	67481079	67438320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67438690_67438792_67438871_67438970_67439148_67439273_67439352_67443098_67443179_67480956
transcript_54727.known	chr16	+	696	2	FSM	ENSG00000270049.4	ENST00000602596.1	696	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGCATGCCTGTAGTAG	67481335	True	NA	NA	False	AATAAA	-17	NA	67481383	67484669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67481520_67484109
transcript_54728.known	chr16	-	498	4	FSM	ENSG00000159723.5	ENST00000290953.3	498	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGGCTGTGGTTATTTC	NA	False	NA	NA	False	AATAAA	-14	NA	67483547	67482570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67482819_67483024_67483111_67483268_67483402_67483516
transcript_54729.known	chr16	-	795	2	FSM	ENSG00000276075.2	ENST00000621378.2	880	2	85	0	8	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGCCTGTCACTTGGGAG	NA	False	NA	NA	False	AATAAA	-18	NA	67528675	67517949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67518386_67528316
transcript_5473.known	chr1	+	1818	10	FSM	ENSG00000117448.14	ENST00000372070.7	1818	10	0	0	0	0	multi-exon	TRUE	canonical	3	343	junction_1	506.487687686263	1067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	NA	False	NA	27	True	AATAAA	-17	NA	45550542	45570049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45551156_45552435_45552564_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_54732.known	chr16	-	798	2	FSM	ENSG00000261386.2	ENST00000605277.1	798	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCCCTGCTTTGCAG	NA	False	NA	1	True	AATAAA	-21	NA	67563958	67549213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67549348_67563294
transcript_54733.known	chr16	-	899	1	FSM	ENSG00000259804.1	ENST00000562846.1	899	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAATCTCCAGAGTTTTTA	-67562292	False	25	NA	False	AATAAA	-22	NA	67562309	67561410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67561400_67562300
transcript_54734.known	chr16	+	1302	2	FSM	ENSG00000102974.16	ENST00000566078.2	1302	2	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	0	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCCCAGCTACTCGGG	67610802	True	NA	NA	False	AATACA	-31	NA	67610826	67612465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67611614_67611950
transcript_54745.known	chr16	-	1858	9	FSM	ENSG00000102977.17	ENST00000602860.5	1858	9	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	22.4746384843005	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGTTTTTTAATAAAATAAT	-67656822	True	NA	-56	True	NA	NA	NA	67660281	67657562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67657685_67657761_67657854_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659614_67659701_67659796_67659902_67660046_67660121
transcript_54746.known	chr16	-	1408	12	FSM	ENSG00000102977.17	ENST00000602320.1	1408	12	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_2	144.042177018853	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTCATGCGGCAGGAGAG	-67656780	True	NA	-39	True	AATAAA	-3	NA	67660239	67657545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67657685_67657761_67657815_67657985_67658363_67658554_67658642_67658719_67658817_67658927_67659080_67659228_67659264_67659374_67659420_67659536_67659614_67659701_67659796_67659902_67660037_67660121
transcript_54747.known	chr16	+	1244	3	FSM	ENSG00000102981.10	ENST00000458121.7	1244	3	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	45	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGGTCCTTGTGTGTCC	67659635	True	NA	12	True	ATTAAA	-18	NA	67660959	67662774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67661102_67661454_67661678_67661895
transcript_54748.nnic	chr16	+	1235	3	NNC	ENSG00000102981.10	novel	1244	3	NA	NA	38	-4	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	94	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTCATGGTCCTTGTGT	67659673	True	NA	8	True	ATTAAA	-14	NA	67660997	67662770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67661102_67661454_67661711_67661895
transcript_54750.known	chr16	+	1281	2	FSM	ENSG00000102981.10	ENST00000602727.1	1281	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTCCCTCAGCCTGGGGAA	67661188	True	NA	-32	True	NA	NA	NA	67661231	67662730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67661678_67661895
transcript_54752.known	chr16	-	1565	7	FSM	ENSG00000124074.12	ENST00000243878.9	1565	7	0	0	0	0	multi-exon	TRUE	canonical	3	27	junction_4	11.7815769553806	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTTCCATAAGAGCTTT	-67666471	True	NA	0	True	ATTAAA	-17	NA	67666750	67662944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67664063_67664995_67665169_67666070_67666266_67666357
transcript_54760.nnic	chr16	-	878	5	NNC	ENSG00000124074.12	novel	1253	4	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	24.0416305603426	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTTCCATAAGAGCTT	-67666477	True	NA	-1	True	ATTAAA	-16	NA	67666756	67662945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_67663322_67663419_67663557_67663656_67663821_67663936_67663999_67666617
transcript_54766.known	chr16	+	1314	4	FSM	ENSG00000159761.15	ENST00000445068.1	1314	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4.54606056566195	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	67666593	True	NA	7	True	AATAAA	-20	NA	67666836	67668757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667226_67667526_67667877_67668099_67668199
transcript_54767.known	chr16	+	677	4	FSM	ENSG00000159761.15	ENST00000602365.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.65383665716478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGCCGCTGTACCAGTACG	67666646	False	NA	NA	False	NA	NA	NA	67666889	67668215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668172
transcript_54768.known	chr16	+	1266	4	FSM	ENSG00000159761.15	ENST00000403458.9	1266	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	4.98887651569859	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGTGATTCCCCAGAT	67666570	True	NA	5	True	AATAAA	-18	NA	67666813	67668755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667295_67667526_67667877_67668099_67668199
transcript_54774.nic	chr16	+	1367	3	ISM	ENSG00000159761.15	ENST00000403458.9	1266	4	2	-2	0	0	intron_retention	FALSE	canonical	2	14	junction_2	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	67666572	True	NA	7	True	AATAAA	-20	NA	67666815	67668757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_67667073_67667295_67667526_67667877
transcript_54776.known	chr16	+	1719	2	FSM	ENSG00000159761.15	ENST00000459925.1	1719	2	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGATTCCCCAGATAG	67666572	True	NA	7	True	AATAAA	-20	NA	67666815	67668757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667295
transcript_54777.known	chr16	+	461	2	FSM	ENSG00000159761.15	ENST00000602974.5	461	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGCAGTCCCTGGAC	67666589	True	NA	NA	False	NA	NA	NA	67666832	67668098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67667073_67667877
transcript_54779.known	chr16	-	2018	3	FSM	ENSG00000141098.13	ENST00000268797.12	2018	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	2.5	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATGGCATGTGGTTTTT	-67718280	True	NA	-4	True	AATAAA	-15	NA	67719316	67674535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67676054_67685456_67685803_67719162
transcript_54780.known	chr16	-	5507	2	FSM	ENSG00000141098.13	ENST00000602279.2	5507	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTATTCGTTTTGATT	-67718264	True	NA	NA	False	AATAAA	-23	NA	67719300	67680433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67685803_67719162
transcript_54781.known	chr16	-	1991	3	FSM	ENSG00000141098.13	ENST00000602377.1	1991	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCATGTGGTTTTTGTTTG	-67718303	True	NA	1	True	AATAAA	-20	NA	67719339	67674530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67676054_67685511_67685803_67719162
transcript_54782.known	chr16	-	2029	3	FSM	ENSG00000141098.13	ENST00000602496.1	2029	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATTGAAGAGATTGAA	-67718288	True	NA	-31	True	AATAAA	-3	NA	67719324	67680748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67681491_67684677_67685803_67719162
transcript_54785.known	chr16	-	5245	14	FSM	ENSG00000141084.12	ENST00000317506.8	5245	14	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	8.25194974271008	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATGTGTGTCTGGTCTCT	-67805668	True	NA	-3	True	ATTAAA	-18	NA	67806560	67723069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67726559_67727326_67727439_67727750_67727897_67728389_67728512_67729279_67729485_67729679_67729829_67729937_67730047_67731471_67731585_67734857_67735043_67738012_67738036_67744287_67744456_67772033_67772087_67805427_67805540_67806301
transcript_54788.known	chr16	+	582	6	FSM	ENSG00000102898.12	ENST00000567105.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1242.90263496382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACGATGCTTGGGTTTGCA	67832401	True	NA	NA	False	ATTAAA	-7	NA	67846934	67870852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67846986_67847277_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_54792.known	chr16	+	2120	5	FSM	ENSG00000102898.12	ENST00000219169.9	2120	5	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	350.150681849972	2434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGTTTCTTTCTTCCAA	67832399	True	NA	23	True	AATAAA	-15	NA	67846932	67872567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_54795.known	chr16	+	1119	5	FSM	ENSG00000102898.12	ENST00000569436.6	1119	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	1064.80338560694	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTTTAATTAGTTTACTA	67847041	False	NA	27	True	AATAAA	-29	NA	67847160	67871323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67847457_67865101_67865230_67868339_67868412_67868500_67868600_67870799
transcript_54800.known	chr16	+	1876	1	FSM	ENSG00000168286.3	ENST00000303596.3	1876	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	135	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGGTCTCGCCATTTTAT	67838489	True	NA	12	True	ATTAAA	-19	NA	67842319	67844195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67842300_67844200
transcript_54801.known	chr16	-	2957	10	FSM	ENSG00000102901.13	ENST00000569862.5	2957	10	0	0	0	0	multi-exon	TRUE	canonical	3	377	junction_9	28.2055944017416	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTGCATTTTGGTGCAT	-67824836	True	NA	0	True	AATAAA	-16	NA	67833913	67828156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832546_67833749
transcript_54802.known	chr16	-	2133	12	FSM	ENSG00000102901.13	ENST00000565157.5	2133	12	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_5	60.6615049419167	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	-67824820	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_54803.known	chr16	-	1990	11	FSM	ENSG00000102901.13	ENST00000436104.6	1990	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	164.758034705443	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATATTCTGCATTTTGGTGC	-67824820	True	NA	-2	True	AATAAA	-14	NA	67833897	67828158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828560_67828666_67828844_67829422_67829517_67829764_67830549_67831215_67831359_67831840_67831891_67832011_67832109_67832227_67832316_67832454_67832546_67833749
transcript_54804.known	chr16	-	1737	12	FSM	ENSG00000102901.13	ENST00000626059.2	1737	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	138.556847539196	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGAATATTCTGCATTT	-67824819	True	NA	-8	True	AATAAA	-8	NA	67833896	67828164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67828391_67828473_67828579_67828666_67828844_67829422_67829517_67829764_67830089_67830389_67830549_67831215_67831359_67831575_67831613_67831753_67831891_67832011_67832109_67832454_67832546_67833749
transcript_54805.known	chr16	+	589	4	FSM	ENSG00000102898.12	ENST00000568233.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	1872	junction_1	303.32637354653	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTGTAGAAAGTCCTAT	67832401	True	NA	NA	False	AATAAA	-41	NA	67846934	67868838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67846986_67865101_67865230_67868339_67868412_67868500
transcript_54809.known	chr16	+	626	3	FSM	ENSG00000188038.8	ENST00000339176.8	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	14.5	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884151	True	NA	28	True	ATTAAA	-17	NA	67884884	67886368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67884983_67885721_67885855_67885973
transcript_54810.nnic	chr16	+	655	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-63	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_2	26.5	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	NA	False	NA	28	True	ATTAAA	-17	NA	67884821	67886368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67884983_67885721_67885855_67886007
transcript_54811.nnic	chr16	+	642	3	NNC	ENSG00000188038.8	novel	626	3	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	43.5	219	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGCTCCTTCCTTTCTCC	67884114	True	NA	28	True	ATTAAA	-17	NA	67884847	67886368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_67884983_67885742_67885855_67885973
transcript_54817.known	chr16	-	977	8	FSM	ENSG00000205220.12	ENST00000358514.9	977	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	355.400722381635	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67936840	False	NA	NA	False	AATAAA	-20	NA	67936850	67934505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581_67935698_67935962_67936104_67936214_67936313_67936397_67936486_67936693
transcript_54827.known	chr16	+	3497	3	FSM	ENSG00000159792.10	ENST00000291041.6	3497	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	1.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTCTGGCTTCTTGCTGT	67890205	True	NA	25	True	AGTAAA	-39	NA	67893253	67929676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67893372_67908679_67909707_67927324
transcript_54829.known	chr16	+	1509	2	FSM	ENSG00000159792.10	ENST00000570631.5	1509	2	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTCTTTTTGTTTTGTTT	67890223	True	NA	NA	False	NA	NA	NA	67893271	67910088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67893372_67908679
transcript_54830.known	chr16	-	591	4	FSM	ENSG00000205220.12	ENST00000570985.1	591	4	0	0	0	0	multi-exon	FALSE	canonical	3	723	junction_2	15.1730755689881	4711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATGGCTGTGTCATTCTT	-67935785	False	NA	NA	False	AATAAA	-20	NA	67935795	67934505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67934672_67934796_67934949_67935419_67935479_67935581
transcript_54831.known	chr16	+	185	2	FSM	ENSG00000159792.10	ENST00000575198.1	185	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTGGTTTTGCTTTG	67890252	True	NA	4	True	AATAAA	-17	NA	67893300	67903145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_67893372_67903031
transcript_54832.known	chr16	-	3627	24	FSM	ENSG00000124067.17	ENST00000541864.6	3627	24	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_23	50.027213766132	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGGAAGGGTAGCCAGGGA	-67966526	False	NA	NA	False	NA	NA	NA	67966878	67944481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_54833.known	chr16	-	4708	24	FSM	ENSG00000124067.17	ENST00000316341.8	4708	24	0	0	0	0	multi-exon	TRUE	canonical	3	184	junction_12	28.6291720034482	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTCTGCAGAGGCAG	-67966472	True	NA	NA	False	AATAAA	-17	NA	67968637	67943473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67944932_67945086_67945221_67945368_67945554_67945763_67945872_67945950_67946083_67946170_67946341_67946437_67946634_67946936_67947106_67947330_67947436_67947668_67947789_67948060_67948160_67949799_67949919_67950318_67950494_67950653_67950712_67950961_67951061_67951139_67951305_67951822_67952038_67952183_67952426_67954642_67954774_67957741_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_54834.known	chr16	-	1240	5	FSM	ENSG00000213398.8	ENST00000570980.1	1240	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	15.8646619882051	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGCACCTGGTGTGGA	-67943615	False	NA	NA	False	NA	NA	NA	67943625	67940245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67940479_67942362_67942588_67942670_67942767_67942860_67942977_67943055
transcript_54835.nic	chr16	-	758	5	ISM	ENSG00000124067.17	ENST00000541864.6	3627	24	10	13047	10	0	5prime_fragment	FALSE	canonical	3	47	junction_4	99.6151971337707	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGGGCA	-67966516	False	NA	NA	False	TATAAA	-11	NA	67966868	67957528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67966752
transcript_54836.known	chr16	-	673	5	FSM	ENSG00000124067.17	ENST00000576462.1	673	5	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_4	26.6774717692663	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAGGGCA	-67968117	False	NA	NA	False	TATAAA	-11	NA	67968469	67957528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67957797_67957897_67958045_67961574_67961707_67963464_67963560_67968438
transcript_54838.known	chr16	-	1737	10	FSM	ENSG00000141096.6	ENST00000672962.1	1737	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	3.57287448684745	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGGTGCACATGTCCTT	NA	False	NA	-1	True	AATAAA	-15	NA	67980549	67975663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_67976002_67976092_67976229_67976699_67976776_67977269_67977355_67977652_67977830_67977937_67978008_67978266_67978409_67978496_67978627_67979638_67979766_67980093
transcript_54842.known	chr16	+	1982	17	FSM	ENSG00000167264.18	ENST00000565263.6	1982	17	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	20.8172854858649	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021330	True	NA	14	True	CATAAA	-1	NA	68023283	68079320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_54844.known	chr16	+	1933	16	FSM	ENSG00000167264.18	ENST00000358896.10	1933	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	27.0970273072322	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCTTGTGTCCTGGCATG	68021299	True	NA	14	True	CATAAA	-1	NA	68023252	68079320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68038005_68038150_68049504_68049551_68053563_68053656_68054573_68054618_68056363_68056425_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_54847.known	chr16	+	1864	15	FSM	ENSG00000167264.18	ENST00000432752.5	1864	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	47.1965603208798	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAAATGGGCTTGTGTCCTG	68021338	True	NA	9	True	NA	NA	NA	68023291	68079315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68023352_68025414_68025495_68038005_68038150_68049504_68049551_68053563_68053656_68061065_68061114_68066316_68066383_68066565_68066637_68070133_68070221_68070939_68071109_68074033_68074156_68075354_68075505_68076631_68076720_68078444_68078519_68078748
transcript_54858.nnic	chr16	+	633	3	NNC	ENSG00000167264.18	novel	373	4	NA	NA	-17	-6519	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	56	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTTTAATGTCTTTTT	68021282	True	NA	8	True	AATAAA	-20	NA	68023235	68031627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_68023352_68025414_68025495_68031190
transcript_54860.nnic	chr16	+	520	3	Antisense	novelGene_ENSG00000261469.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGGCTGGTCTCGAA	68236258	True	NA	2	True	AATAAA	-18	NA	68236313	68239387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_68236560_68237566_68237651_68239197
transcript_54862.nnic	chr16	+	505	3	Antisense	novelGene_ENSG00000261469.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCTGGTCTCGAACTCCT	68236258	True	NA	7	True	AATAAA	-23	NA	68236313	68239392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_68236560_68237566_68237651_68239217
transcript_54864.known	chr16	+	2694	6	FSM	ENSG00000103066.13	ENST00000219345.10	2694	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	7.39188744503053	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCCCTGGCCTACATTCT	68244908	True	NA	8	True	AATAAA	-20	NA	68245372	68261058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255765_68255991_68259145
transcript_54865.known	chr16	+	1203	6	FSM	ENSG00000103066.13	ENST00000566188.5	1203	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	26.4529771481397	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACCTGCTGTTGGCCTCTGG	68244908	True	NA	NA	False	NA	NA	NA	68245372	68259692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68245554_68249289_68249447_68254918_68255038_68255281_68255381_68255890_68255991_68259145
transcript_54867.known	chr16	+	6308	12	FSM	ENSG00000103064.15	ENST00000566454.5	6308	12	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_2	34.3378931952866	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	68262725	True	NA	3	True	AATAAA	-16	NA	68264559	68301819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68264577_68266592_68266722_68273817_68273905_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_54870.known	chr16	+	6255	11	FSM	ENSG00000103064.15	ENST00000219343.11	6255	11	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_2	22.4501670372405	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTTCTCTCTTCTTTAAT	68262691	True	NA	3	True	AATAAA	-16	NA	68264525	68301819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68264577_68266592_68266722_68274690_68275250_68287745_68287872_68290395_68290541_68291208_68291333_68291557_68291662_68294704_68294802_68296363_68296514_68296626_68296811_68297233
transcript_54884.known	chr16	-	4191	5	FSM	ENSG00000103061.13	ENST00000263997.11	4191	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	12.4096736459909	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTGCAGGTAAGACTCAA	-68308547	True	NA	NA	False	AGTAAA	-18	NA	68310946	68298033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_68301406_68302380_68302502_68304025_68304233_68310334_68310614_68310734
transcript_54893.known	chr16	-	910	3	FSM	ENSG00000103061.13	ENST00000568538.2	910	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	12	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGAGTGACAACAAAATCT	-68308423	True	NA	NA	False	GATAAA	-25	NA	68310822	68303689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_68304233_68310334_68310614_68310734
transcript_54896.known	chr16	+	3738	19	FSM	ENSG00000132600.18	ENST00000441236.3	3738	19	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	67.7292403618998	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTAAATCTCAGCAAGTT	68306703	True	NA	20	True	ATTAAA	-19	NA	68311018	68358584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68312041_68312177_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54897.nic	chr16	+	2327	18	NIC	ENSG00000132600.18	novel	4265	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_1	62.9416712459937	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306666	True	NA	5	True	AATAAA	-18	NA	68310981	68357259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68311112_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54901.nic	chr16	+	2304	18	NIC	ENSG00000132600.18	novel	4531	19	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	137	junction_1	43.8194628985765	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306677	True	NA	5	True	AATAAA	-18	NA	68310992	68357259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54918.nic	chr16	+	2082	15	NIC	ENSG00000132600.18	novel	3416	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_10	68.2450940151954	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306677	True	NA	5	True	AATAAA	-18	NA	68310992	68357259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54934.known	chr16	+	1723	11	FSM	ENSG00000132600.18	ENST00000565356.5	1723	11	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_10	74.9143510951006	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATATAAATTAAGCGT	68306748	True	NA	-22	True	NA	NA	NA	68311063	68352660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68324682_68324833_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68352247
transcript_54935.known	chr16	+	2091	17	FSM	ENSG00000132600.18	ENST00000449359.7	2091	17	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	74.5125566179956	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGAGTGGCTCATGGCT	68306740	True	NA	5	True	AATAAA	-18	NA	68311055	68357259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68311100_68315896_68316075_68321425_68321463_68329065_68329175_68337458_68337572_68339321_68339564_68339787_68339969_68345674_68345803_68346144_68346281_68347210_68347295_68347630_68347679_68348341_68348432_68352247_68352410_68353491_68353567_68355722_68355884_68356700_68356798_68357053
transcript_54936.known	chr16	+	1062	2	FSM	ENSG00000287760.1	ENST00000666035.1	1062	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGAGAAAA	68448798	True	NA	NA	False	NA	NA	NA	68448842	68450002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68449067_68449164
transcript_54938.nic	chr16	+	963	6	NIC	ENSG00000184939.16	novel	579	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_2	16.9044372872924	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATCTTTGTGGCATTT	68529895	True	NA	NA	False	AAAAAG	-15	NA	68530102	68576072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68530335_68533697_68533856_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_54957.known	chr16	+	695	5	FSM	ENSG00000184939.16	ENST00000611381.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	15.9275704361965	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAGCA	68538448	True	NA	NA	False	NA	NA	NA	68539315	68576040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68539470_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_54958.nic	chr16	+	796	5	NIC	ENSG00000184939.16	novel	695	5	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_1	17.4122801493658	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGATCTTTGTGGCATTT	68539049	False	NA	NA	False	AAAAAG	-15	NA	68539256	68576072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68539480_68539757_68539826_68557997_68558125_68558472_68558569_68575790
transcript_54962.nic	chr16	+	451	3	NIC	ENSG00000184939.16	novel	199	2	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	6	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGTTTTTCTTTTGC	68539047	False	NA	23	True	AATAAA	-37	NA	68539254	68555240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68539470_68539757_68539826_68555072
transcript_54965.nic	chr16	+	459	3	NIC	ENSG00000184939.16	novel	545	4	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_2	3	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGTGTTTTTCTTTTGC	68539049	False	NA	23	True	AATAAA	-37	NA	68539256	68555240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_68539480_68539757_68539826_68555072
transcript_54970.known	chr16	+	4452	16	FSM	ENSG00000062038.15	ENST00000264012.9	4452	16	0	0	0	0	multi-exon	FALSE	canonical	3	800	junction_9	56.7217771230768	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGACTAATTCTGTAAAG	68629439	True	NA	5	True	AATAAA	-16	NA	68645309	68700292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967_68681097_68682301_68682488_68684582_68684825_68685204_68685351_68687511_68687737_68691719_68691927_68695254_68695386_68695776_68695924_68698190
transcript_54974.nic	chr16	+	1885	8	ISM	ENSG00000062038.15	ENST00000429102.6	3611	16	266	17172	-42	-528	5prime_fragment	FALSE	canonical	3	813	junction_7	55.6666462992345	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGTTCCGAGCAACTG	68629388	True	NA	8	True	AATAAA	-20	NA	68645258	68681864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_68645425_68645635_68645751_68676384_68676471_68678133_68678278_68678500_68678657_68678761_68678907_68679798_68679975_68680967
transcript_54977.known	chr16	+	607	3	FSM	ENSG00000062038.15	ENST00000569080.2	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTTCTCTGTGAGTCTCT	68695809	True	NA	13	True	AATACA	-25	NA	68695824	68727468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68695924_68722424_68722617_68727152
transcript_54978.known	chr16	+	4811	16	FSM	ENSG00000039068.20	ENST00000261769.10	4811	16	0	0	0	0	multi-exon	TRUE	canonical	3	975	junction_10	57.8682027445893	511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGTCAAATTTGTTTTA	68708067	True	NA	13	True	ATTAAA	-14	NA	68737291	68835537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68737464_68738296_68738412_68801669_68801894_68808423_68808568_68808692_68808849_68810196_68810342_68811683_68811860_68812134_68812264_68813312_68813496_68815514_68815760_68819279_68819426_68822000_68822226_68823398_68823627_68828173_68828305_68829653_68829798_68833289
transcript_54980.known	chr16	+	542	5	FSM	ENSG00000103047.8	ENST00000562000.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	28.2787464361488	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGCTGAAGCACGTAGTG	NA	False	NA	NA	False	NA	NA	NA	68973039	69083515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68973144_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_54981.nnic	chr16	+	1051	2	NNC	ENSG00000103047.8	novel	4893	18	NA	NA	45963	368	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAGGGCTAAATCTGGTC	NA	False	NA	5	True	AATAAA	-18	NA	69072537	69084214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_69072859_69083484
transcript_54983.known	chr16	+	4893	18	FSM	ENSG00000103047.8	ENST00000261778.2	4893	18	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	9.86307643773529	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGACTCCACGCAACCCAC	68841964	True	NA	14	True	AATAAA	-28	NA	68843530	69085182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_68843712_68859883_68860525_68862944_68863062_68867078_68867221_68875153_68875291_68878117_68878281_68880547_68880631_68900433_68900547_68902327_68902505_68907442_68907576_68909210_68909403_68919084_68919220_68927567_68928084_68930237_68930296_68974027_68974169_69022827_69022980_69040307_69040422_69083484
transcript_54985.known	chr16	+	9789	7	FSM	ENSG00000168807.17	ENST00000336278.9	9754	7	-35	0	-18	0	multi-exon	FALSE	canonical	3	44	junction_1	8.31497978884428	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGTTGTTTTTTTTTTC	NA	False	NA	3	True	AATAAA	-17	NA	69187128	69309052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69187747_69245601_69245816_69260049_69260261_69270142_69270286_69284047_69284245_69299589_69299775_69300831
transcript_54988.nnic	chr16	+	2118	17	NNC	ENSG00000141076.18	novel	2188	17	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	25	junction_16	235.078834848546	62	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124561	True	NA	NA	False	AATAAA	-16	NA	69132595	69169021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167124_69168881
transcript_54989.known	chr16	+	2188	17	FSM	ENSG00000141076.18	ENST00000314423.12	2188	17	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_8	88.5465758442979	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTAGTCATTATAAATGT	69124614	True	NA	NA	False	AATAAA	-16	NA	69132648	69169021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69132690_69133457_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_54994.known	chr16	+	2186	17	FSM	ENSG00000141076.18	ENST00000562237.5	2186	17	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	214.783893934694	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACTAGTCATTATAAATG	69124561	True	NA	NA	False	AATAAA	-15	NA	69132595	69169020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69132690_69133511_69133619_69136695_69136888_69137800_69137886_69139824_69139915_69143177_69143390_69150536_69150709_69150812_69150905_69153583_69153681_69154392_69154458_69155870_69155994_69157083_69157241_69160355_69160463_69163082_69163179_69165340_69165527_69167074_69167186_69168820
transcript_55.known	ERCC-00112	+	1120	1	FSM	ERCC-00112A	DQ459422	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	237	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00112_+_0_1100
transcript_5501.known	chr1	+	1360	10	FSM	ENSG00000117448.14	ENST00000621846.4	1360	10	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	409.810465073735	1856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTGCTTGCTTGTCTTAT	NA	False	NA	26	True	AATAAA	-16	NA	45550782	45570048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45550877_45550965_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_5502.known	chr1	+	1407	9	FSM	ENSG00000117448.14	ENST00000351829.9	1407	9	0	0	0	0	multi-exon	FALSE	canonical	3	1066	junction_1	203.119692238345	3869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45538057	True	NA	27	True	AATAAA	-17	NA	45550825	45570049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45551156_45561788_45561879_45566568_45566689_45566868_45567021_45567981_45568178_45568484_45568685_45568926_45569000_45569142_45569230_45569890
transcript_55022.nic	chr16	-	1356	5	NIC	ENSG00000168802.14	novel	1073	4	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	173	junction_4	154.261142223179	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132190	False	3899	-10	True	AATAAA	-15	NA	69132209	69118009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_69118526_69120106_69120650_69121052_69121171_69121435_69121494_69132088
transcript_55024.known	chr16	+	4191	4	FSM	ENSG00000103044.11	ENST00000569188.6	4191	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	36.4447831962576	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCGAAACTACTACTTTGT	69104967	True	NA	14	True	AATAAA	-22	NA	69105652	69117660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69105788_69109395_69110032_69113440_69113543_69114342
transcript_55026.known	chr16	+	900	4	FSM	ENSG00000103044.11	ENST00000566118.5	900	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	28.4722086720835	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCCTTCAACGTGGAGCGG	69106346	True	NA	NA	False	NA	NA	NA	69106608	69114397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69106716_69109395_69110032_69113440_69113543_69114342
transcript_5503.known	chr1	+	910	5	FSM	ENSG00000117448.14	ENST00000476957.5	910	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	547.403130699853	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCAGTAGTCCTGGCATTGG	45538085	True	NA	NA	False	NA	NA	NA	45550853	45568624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45551156_45566568_45566689_45566868_45567021_45567981_45568178_45568484
transcript_55030.nic	chr16	-	1238	4	NIC	ENSG00000286140.2	novel	2761	3	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	173	junction_3	55.7215298505783	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132190	False	3899	-10	True	AATAAA	-15	NA	69132209	69118009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_69118526_69120106_69120650_69121435_69121494_69132088
transcript_55036.known	chr16	-	1073	4	FSM	ENSG00000168802.14	ENST00000398235.6	1073	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	148.302243932975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGACCAAACCCCAATCT	-69132127	False	NA	NA	False	NA	NA	NA	69132146	69119810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132088
transcript_55037.known	chr16	-	2921	4	FSM	ENSG00000168802.14	ENST00000448552.7	2921	4	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	69.5956575912287	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132569	False	NA	-10	True	AATAAA	-15	NA	69132588	69118009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69120650_69121052_69121171_69121435_69121494_69132483
transcript_5504.known	chr1	+	948	4	FSM	ENSG00000117448.14	ENST00000473038.5	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	692.679018176689	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45567519	False	NA	27	True	AATAAA	-17	NA	45567548	45570049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45568178_45568926_45569000_45569142_45569230_45569890
transcript_55042.nnic	chr16	-	695	3	NIC	ENSG00000286140.2	novel	2761	3	NA	NA	-58	0	combination_of_known_splicesites	FALSE	canonical	3	115	junction_1	29	1143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132190	False	3899	-10	True	AATAAA	-15	NA	69132209	69118009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_69118526_69121435_69121494_69132088
transcript_55044.known	chr16	-	2761	3	FSM	ENSG00000286140.2	ENST00000306585.9	2761	3	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_2	61	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGTGTCACTGTGTTTT	-69132132	False	3899	-10	True	AATAAA	-15	NA	69132151	69118009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69120650_69121435_69121494_69132088
transcript_55046.known	chr16	+	4106	11	FSM	ENSG00000132612.16	ENST00000254950.13	4106	11	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_6	31.3949040450835	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGATGCCCACCACAAAAGC	69302743	True	NA	NA	False	AATAAA	-19	NA	69311349	69326939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69311533_69316007_69316120_69316224_69316373_69318649_69318712_69318822_69318943_69319386_69319544_69320140_69320290_69320687_69320770_69321050_69321271_69322559_69322701_69324207
transcript_5505.known	chr1	+	667	5	FSM	ENSG00000117448.14	ENST00000497973.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_2	603.035394898177	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTTGCTTGTCTTATT	45566851	False	NA	27	True	AATAAA	-17	NA	45566868	45570049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45567021_45567981_45568178_45568926_45569000_45569142_45569230_45569890
transcript_55052.known	chr16	+	2055	5	FSM	ENSG00000132603.15	ENST00000254940.10	2055	5	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_4	27.233940221716	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAACTTGATTGTGGCCTT	69334378	True	NA	17	True	AATAAA	-30	NA	69339771	69343106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341179_69341321_69341532
transcript_55058.known	chr16	+	1887	4	FSM	ENSG00000132603.15	ENST00000254941.6	1887	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	210.086225684175	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCAAACTTGATTGTGGCC	69334403	True	NA	15	True	AATAAA	-28	NA	69339796	69343104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69339886_69340005_69340093_69340193_69340333_69341532
transcript_55066.known	chr16	-	1731	4	FSM	ENSG00000213380.16	ENST00000562081.2	1731	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_3	7.36357401145817	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCATCACTCCAAAAAGATC	-69330231	True	NA	42	True	AGTAAA	-24	NA	69339583	69332595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69332883_69334520_69335349_69336504_69336713_69339175
transcript_55067.known	chr16	-	2859	2	FSM	ENSG00000258429.2	ENST00000288022.2	2859	2	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAGTAAAATCTCTCCC	-69321236	False	9352	NA	False	AATAAA	-18	NA	69330588	69326912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69329180_69329996
transcript_55068.known	chr16	-	887	2	FSM	ENSG00000272617.3	ENST00000562949.1	887	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCAGGTAAGCATGTGACT	-69325519	False	NA	-7	True	TTTAAA	-2	NA	69334871	69328643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69329180_69334520
transcript_55069.known	chr16	+	760	3	FSM	ENSG00000132603.15	ENST00000562523.1	760	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	208	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTAATAGGAGCAATT	69340254	False	NA	NA	False	AATAAA	-27	NA	69340275	69342072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69340333_69341179_69341321_69341510
transcript_55070.known	chr16	+	4262	5	FSM	ENSG00000103018.18	ENST00000307892.13	4262	5	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	22.7087538187369	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	69406770	True	NA	25	True	AATAAA	-18	NA	69424618	69466264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462429
transcript_55072.known	chr16	+	823	5	FSM	ENSG00000103018.18	ENST00000687780.1	1446	5	0	623	0	140	multi-exon	FALSE	canonical	1	4	junction_4	351.593781941604	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTTCTTTTAAGTAAATT	69406831	True	NA	86	True	NA	NA	NA	69424679	69462918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69448114_69448145_69459092_69459122_69462461
transcript_55077.known	chr16	+	2492	3	FSM	ENSG00000103018.18	ENST00000514123.5	2492	3	0	0	0	0	multi-exon	FALSE	canonical	3	778	junction_2	26	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCCAAAAAACTATTGAGC	69406770	True	NA	NA	False	NA	NA	NA	69424618	69450238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69448114
transcript_55079.known	chr16	+	577	3	FSM	ENSG00000103018.18	ENST00000684784.1	1679	3	196	906	103	124	multi-exon	FALSE	canonical	0	0	junction_1	412	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTTTATTTTTCCATTT	69424772	False	NA	70	True	NA	NA	NA	69424782	69462902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69459092_69459122_69462429
transcript_55081.known	chr16	+	2421	1	FSM	ENSG00000260108.1	ENST00000567834.1	2421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGCCCCGACTACACTTAT	69463825	False	NA	25	True	AATAAA	-18	NA	69463843	69466264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69463800_69466300
transcript_55082.known	chr16	+	1658	3	FSM	ENSG00000103018.18	ENST00000688840.1	4203	3	59	2486	-2	-26	multi-exon	FALSE	canonical	0	0	junction_2	415	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAATAAAATACTGGCGGT	69406829	True	NA	2	True	NA	NA	NA	69424677	69463778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69424858_69447149_69447279_69462429
transcript_55083.nic	chr16	+	948	2	ISM	ENSG00000102908.22	ENST00000567990.5	2855	13	244	116738	62	-115579	5prime_fragment	FALSE	canonical	3	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTCCCACAGTAGAAGAAAT	69566241	False	NA	NA	False	AAGAAA	-16	NA	69566269	69569337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_69566375_69568494
transcript_55084.known	chr16	+	1588	1	FSM	ENSG00000260772.1	ENST00000561622.1	1588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTGCAGTGGATAGCTG	69703048	False	NA	2	True	AATAAA	-15	NA	69703064	69704652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69703100_69704700
transcript_55089.known	chr16	-	2521	6	FSM	ENSG00000181019.13	ENST00000320623.10	2521	6	0	0	0	0	multi-exon	FALSE	canonical	3	257	junction_2	29.9492904757358	1695	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	-69721466	True	NA	0	True	AATAAA	-26	NA	69726560	69709400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69711282_69713027_69713130_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_55090.known	chr16	-	1105	5	FSM	ENSG00000181019.13	ENST00000379046.6	1105	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	118.113028493896	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTTCTTTAAAGGCA	-69721490	True	NA	NA	False	NA	NA	NA	69726584	69710726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69711282_69713027_69713130_69718122_69718254_69718369_69718535_69726432
transcript_55091.known	chr16	-	2527	5	FSM	ENSG00000181019.13	ENST00000379047.7	2527	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	119.534513844329	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATTGGTATCAGTGAAGC	NA	False	NA	0	True	AATAAA	-26	NA	69726668	69709400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69711282_69714963_69715078_69718122_69718254_69718369_69718535_69726432
transcript_55092.known	chr16	-	924	4	FSM	ENSG00000181019.13	ENST00000439109.6	924	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	142.364165278892	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATCCGACTGGGCTCAA	-69721466	True	NA	52	True	NA	NA	NA	69726560	69710781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69711282_69718122_69718254_69718369_69718535_69726432
transcript_55095.known	chr16	-	1716	9	FSM	ENSG00000141101.13	ENST00000268802.10	1716	9	0	0	0	0	multi-exon	TRUE	canonical	3	491	junction_4	23.7983061372023	1974	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTTCTTTTCTTTTAAC	-69749202	True	NA	-17	True	AATAAA	-15	NA	69754926	69741870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69742602_69744872_69745018_69748231_69748330_69748917_69749119_69749212_69749339_69749558_69749631_69752240_69752372_69754593_69754727_69754847
transcript_55113.nic	chr16	+	2498	9	ISM	ENSG00000198373.13	ENST00000359154.7	4487	24	-19	31489	-15	0	5prime_fragment	FALSE	canonical	3	133	junction_1	32.6716620330218	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	69757601	True	NA	2	True	AATAAA	-13	NA	69762312	69910250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_69762392_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_55114.known	chr16	+	2474	9	FSM	ENSG00000198373.13	ENST00000569174.5	2474	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	52.9963147303659	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACAGTATTTTGTTTATA	NA	False	NA	2	True	AATAAA	-13	NA	69776186	69910250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_69776242_69786995_69787081_69798681_69798830_69799173_69799296_69840125_69840264_69842023_69842121_69871803_69871932_69888038_69888250_69908760
transcript_55116.known	chr16	-	2764	25	FSM	ENSG00000196696.13	ENST00000530079.5	2764	25	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_22	73.6969088564778	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACCCACACTCCAAAAACAAA	-70064440	True	NA	NA	False	AAGAAA	-44	NA	70065853	69976351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69976733_69978076_69978113_69978221_69978283_69982349_69982495_69982657_69982758_69986380_69986510_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70039101_70042350_70042417_70042929_70043004_70065755
transcript_55118.known	chr16	-	4184	26	FSM	ENSG00000196696.13	ENST00000531894.5	4184	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	79.2323570266593	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATACTGCAGTCCTTATG	-70064535	True	NA	NA	False	AATAAA	-21	NA	70065948	69976296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_69976733_69976810_69978004_69978076_69978113_69982349_69982495_69982657_69982758_69986380_69986510_69989955_69990209_69990596_69990684_69996068_69996227_69996389_69996469_70010750_70010857_70011840_70011930_70014103_70014168_70018046_70018098_70021823_70021950_70023378_70023478_70023629_70023679_70024585_70024671_70030987_70031067_70031899_70031969_70034170_70034361_70036431_70036579_70038904_70038986_70042350_70042417_70042929_70043004_70065755
transcript_55119.known	chr16	-	3389	21	FSM	ENSG00000090861.17	ENST00000675953.1	3389	21	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_17	276.600592009489	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGGCTGCTGTGGTG	-70270564	True	NA	-28	True	AATAAA	-10	NA	70289547	70252302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271889_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_55120.known	chr16	-	3489	21	FSM	ENSG00000090861.17	ENST00000676212.1	3489	21	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_5	275.761287166999	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255719_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_55121.known	chr16	-	3717	21	FSM	ENSG00000090861.17	ENST00000674963.1	3717	21	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_20	268.487518331858	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCGCGCGTCTTTAAACAA	-70289569	False	NA	NA	False	NA	NA	NA	70289580	70251982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258032_70258218_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289529
transcript_55126.known	chr16	-	3296	20	FSM	ENSG00000090861.17	ENST00000676168.1	3296	20	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_6	266.787236131868	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTGCTGGCTGCTGTGG	-70270574	True	NA	-30	True	AATAAA	-8	NA	70289557	70252304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70252907_70253267_70253382_70253713_70253801_70253918_70254039_70254620_70254735_70255727_70255837_70258979_70259187_70261043_70261158_70262345_70262525_70264957_70265103_70265537_70265663_70267658_70267810_70268270_70268380_70269617_70269764_70270195_70270341_70271780_70271973_70276485_70276632_70276965_70277155_70282619_70282785_70289420
transcript_55133.known	chr16	+	1765	12	FSM	ENSG00000157349.17	ENST00000563206.5	1765	12	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	169.773354020992	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	NA	False	NA	11	True	AATACA	-16	NA	70294776	70333823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70294918_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_55136.known	chr16	+	3275	12	FSM	ENSG00000157349.17	ENST00000288071.11	3275	12	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	131.601389125779	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCAGAGCAGACTCCCAC	70292672	True	NA	96	True	ATTAAA	-26	NA	70299185	70335305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_55137.known	chr16	+	2923	12	FSM	ENSG00000168872.17	ENST00000302243.12	2923	12	0	0	0	0	multi-exon	TRUE	canonical	3	303	junction_4	117.286750394841	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTGTGTGTATATAAAGTGA	70340812	True	NA	16	True	AATATA	-18	NA	70346902	70373383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70361417_70361511_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_5514.known	chr1	+	3225	15	FSM	ENSG00000132780.17	ENST00000350030.8	3225	15	0	0	0	0	multi-exon	FALSE	canonical	3	925	junction_5	518.28739269692	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGTCTGGAATTATGTT	45547889	True	NA	18	True	AATAAA	-14	NA	45584040	45618893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45607320_45608338_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_55145.known	chr16	+	1692	11	FSM	ENSG00000157349.17	ENST00000355992.7	1692	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	174.669087133356	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAGTTTCATCTTTTAAT	70292680	True	NA	11	True	AATACA	-16	NA	70299193	70333823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_55147.known	chr16	+	1703	11	FSM	ENSG00000168872.17	ENST00000417604.6	1703	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	174.179103224239	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCGTGGAACCAGCTCC	70340853	True	NA	NA	False	NA	NA	NA	70346943	70372297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70347049_70350556_70350606_70355484_70355536_70356111_70356248_70364542_70364646_70365016_70365132_70366084_70366263_70366623_70366862_70370222_70370386_70371371_70371564_70371924
transcript_5515.known	chr1	+	1538	14	FSM	ENSG00000132780.17	ENST00000351223.7	1538	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_5	621.329572666409	1653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGAGGCTTTGATGGTTT	45547913	True	NA	14	True	AATAAA	-14	NA	45584064	45618247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481_45606592_45613168_45613249_45614095_45614182_45614292_45614367_45615012_45615202_45615304_45615472_45616336_45616394_45616625_45616704_45617462_45617592_45618060
transcript_55150.known	chr16	+	1717	10	FSM	ENSG00000157349.17	ENST00000393657.6	1717	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.773599840692	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTCATCTTTTAATTTG	70292648	True	NA	14	True	AATACA	-19	NA	70299161	70333826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70315968_70316105_70317495_70317589_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_5516.known	chr1	+	604	5	FSM	ENSG00000132780.17	ENST00000464190.6	604	5	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_3	48.1404196076436	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCCTAAGATGCTT	45547889	True	NA	104	True	GGGGCT	-15	NA	45584040	45606680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45602254_45602366_45604935_45605017_45606481
transcript_55164.known	chr16	+	707	5	FSM	ENSG00000157349.17	ENST00000569224.1	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	13.2382022948737	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCGAAAGAGAAAAAGAGGAG	70292820	False	NA	NA	False	AAGAAA	-10	NA	70299333	70317942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70312608_70312658_70314901_70314956_70315968_70316105_70317495
transcript_5517.known	chr1	+	1036	5	FSM	ENSG00000132780.17	ENST00000470768.5	1036	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	512.087089761107	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGTAGAGGCTGGAT	45547909	True	NA	NA	False	NA	NA	NA	45584060	45607972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45604935_45605017_45606481_45606592_45607320
transcript_55174.known	chr16	-	887	3	FSM	ENSG00000261777.6	ENST00000570278.1	887	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTAAATAATTTTTTTCT	-70346635	True	NA	NA	False	NA	NA	NA	70346747	70333782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70333961_70341939_70342100_70346198
transcript_55176.known	chr16	+	1790	9	FSM	ENSG00000157349.17	ENST00000562519.5	1790	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	223.095131053997	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATAGTGGTGGAAAGGG	70299124	False	NA	NA	False	NA	NA	NA	70299141	70333972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70299355_70315968_70316105_70324584_70324688_70325573_70325689_70329291_70329470_70329830_70330069_70331721_70331885_70332967_70333160_70333520
transcript_55177.known	chr16	-	1471	5	FSM	ENSG00000261777.6	ENST00000562077.5	1471	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.54950975679639	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAATAAAAAAAAAAACAGGA	-70346635	True	NA	NA	False	TATAAA	-29	NA	70346747	70315639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70316143_70317255_70317374_70333819_70333961_70341939_70342100_70346198
transcript_55179.nnic	chr16	-	714	3	NNC	ENSG00000157350.13	novel	8872	6	NA	NA	12332	2063	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	2	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTAGTCCTTCATTGTTC	-70381413	False	NA	-13	True	ATTAAA	-14	NA	70381427	70379510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_70379933_70380310_70380372_70381196
transcript_5518.known	chr1	+	535	6	FSM	ENSG00000132780.17	ENST00000528084.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	570.422089333855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAGGAGAAAAAACAG	45547890	True	NA	6	True	NA	NA	NA	45584041	45606532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45584206_45591222_45591271_45594693_45594774_45602254_45602366_45604935_45605017_45606481
transcript_55183.nic	chr16	+	971	2	ISM	ENSG00000157353.17	ENST00000485034.1	2651	3	1770	1	1770	0	3prime_fragment	FALSE	canonical	3	27	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGGTCCTCGTAAAGTCA	NA	False	NA	15	True	AATAAA	-17	NA	70479127	70480273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_70479404_70479578
transcript_55185.known	chr16	-	2820	19	FSM	ENSG00000103051.20	ENST00000323786.10	2820	19	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_11	30.0848594052241	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCAGTGTGCTGTTACC	-70516977	True	NA	-3	True	AATAAA	-16	NA	70523554	70480570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70490329_70490393_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_55187.known	chr16	-	2761	18	FSM	ENSG00000103051.20	ENST00000674443.1	2761	18	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_6	110.994965439614	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCCAGTGTGCTGTTA	-70516983	True	NA	-5	True	AATAAA	-14	NA	70523560	70480572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_70481145_70481358_70481488_70481763_70481866_70482091_70482176_70482728_70482822_70483852_70483970_70496265_70496432_70497220_70497388_70497936_70498056_70500957_70501092_70508405_70508465_70509230_70509389_70509915_70510022_70512238_70512433_70514334_70514510_70517625_70517741_70519648_70519732_70523372
transcript_55188.nic	chr16	-	678	4	ISM	ENSG00000103051.20	ENST00000564653.6	590	5	-30	1971	-20	-1864	5prime_fragment	FALSE	canonical	3	454	junction_3	24.9977776790036	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTTTTTTCTTTTTCT	-70517003	True	NA	NA	False	AATAAA	-21	NA	70523580	70514237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_70514510_70517625_70517741_70519648_70519732_70523372
transcript_55189.known	chr16	+	9692	26	FSM	ENSG00000189091.13	ENST00000302516.10	9692	26	0	0	0	0	multi-exon	FALSE	canonical	3	1010	junction_16	115.377613079835	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTGGCATTTCTTTTTCTT	70501743	True	NA	7	True	AATAAA	-18	NA	70523815	70577668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70523929_70526586_70526727_70528872_70529200_70530744_70530918_70532478_70532621_70535307_70535421_70538322_70538461_70539103_70539208_70541668_70541835_70544437_70544534_70548369_70548443_70554445_70554598_70555050_70555207_70556178_70556335_70556885_70557030_70560468_70560592_70561629_70561785_70563875_70564051_70565064_70565271_70565367_70565525_70567410_70567537_70568282_70568496_70569042_70569142_70570005_70570150_70571094_70571200_70571672
transcript_5519.known	chr1	-	3641	13	FSM	ENSG00000159592.11	ENST00000355105.8	3641	13	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_12	149.150068908987	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45678241	True	NA	-17	True	AATAAA	-27	NA	45686533	45627303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45685575_45685621_45686411
transcript_55205.known	chr16	+	1607	6	FSM	ENSG00000157368.12	ENST00000288098.7	1613	6	6	0	2	0	multi-exon	FALSE	canonical	3	17	junction_2	4.53431361950185	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	NA	False	NA	36	True	ATTAAA	-18	NA	70646564	70660682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_55206.known	chr16	+	1779	7	FSM	ENSG00000157368.12	ENST00000429149.6	1779	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.11805291105995	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTTGCTTTGCATCTT	70579883	False	NA	36	True	ATTAAA	-18	NA	70579894	70660682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_70580050_70646547_70646976_70654537_70654672_70656601_70656680_70656959_70657122_70659617_70659754_70659996
transcript_55208.known	chr16	-	4875	3	FSM	ENSG00000180917.18	ENST00000434935.7	4875	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCCTTTGTAATCTGT	-71288083	True	NA	-4	True	ATTAAA	-15	NA	71289402	71281391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71285940_71288877_71288938_71289135
transcript_55210.known	chr16	-	2772	2	FSM	ENSG00000180917.18	ENST00000564690.1	2772	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAACGAAAA	-71288110	True	NA	NA	False	NA	NA	NA	71289429	71286459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71288938_71289135
transcript_55211.known	chr16	+	1454	11	FSM	ENSG00000172137.19	ENST00000302628.9	1454	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3.17647603485372	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAATCTTGTCTAGTGGTC	71358316	True	NA	8	True	AATAAA	-28	NA	71358722	71390433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71385576_71385649_71389748
transcript_55213.known	chr16	+	704	10	FSM	ENSG00000172137.19	ENST00000562305.5	704	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	5.32174667325691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGAGATTGTGCTCTG	71358387	False	NA	NA	False	NA	NA	NA	71358793	71389826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71358887_71372152_71372230_71374744_71374835_71377666_71377748_71382718_71382776_71383366_71383445_71383969_71384026_71384338_71384379_71384782_71384837_71389748
transcript_55217.known	chr16	-	1790	10	FSM	ENSG00000260734.6	ENST00000561754.4	1790	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.05409255338946	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTTGGATATGTGTCCC	-71442019	True	NA	NA	False	AATAAA	-21	NA	71442054	71429979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71430367_71430667_71430742_71431120_71431275_71431420_71431563_71431760_71432003_71432109_71432326_71432664_71432724_71432869_71432893_71433013_71433421_71441968
transcript_55220.known	chr16	-	3206	6	FSM	ENSG00000157429.16	ENST00000288177.10	3206	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.44522215417857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGGTTGTACAACTTGAA	NA	False	NA	2	True	AATAAA	-19	NA	71489324	71473582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71482081_71482144_71484588_71484749_71489271
transcript_55222.known	chr16	-	1947	5	FSM	ENSG00000157429.16	ENST00000569717.5	1947	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	3.76662979332984	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACCTGAGTTAGGTTTTCT	-71484263	True	NA	-7	True	AATAAA	-34	NA	71484613	71474748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71476273_71478227_71478342_71478878_71479101_71482081_71482144_71484588
transcript_55224.known	chr16	-	2612	5	FSM	ENSG00000157429.16	ENST00000565637.5	2612	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.63680924774785	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTGTTTATTCAGTT	NA	False	NA	NA	False	ACTAAA	-22	NA	71489314	71474378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71476273_71478227_71478342_71478878_71479006_71484588_71484749_71488997
transcript_55225.known	chr16	-	1286	1	FSM	ENSG00000157429.16	ENST00000617615.1	1286	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTGTCTTAATTTTTG	-71564902	True	NA	NA	False	AATAAA	-15	NA	71564938	71563652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71563700_71564900
transcript_55227.known	chr16	-	3242	6	FSM	ENSG00000167377.19	ENST00000393539.6	3242	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.8679622641132	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461278	True	NA	-2	True	AATAAA	-23	NA	71462214	71447596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449883_71453242_71453351_71454041_71454219_71456071_71456122_71456763_71456829_71461658
transcript_55229.nic	chr16	-	3208	5	NIC	ENSG00000167377.19	novel	3242	6	NA	NA	-13	0	intron_retention	FALSE	canonical	3	12	junction_3	15.188400179084	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461291	True	NA	-2	True	AATAAA	-23	NA	71462227	71447596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_71449886_71453242_71453351_71454041_71454219_71456763_71456829_71461658
transcript_55230.known	chr16	+	230	3	FSM	ENSG00000247324.2	ENST00000567341.1	230	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAAAGCTCCTACTCCTAC	71462302	True	NA	NA	False	AATAAA	-15	NA	71462326	71464067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71462387_71463257_71463293_71463932
transcript_55234.known	chr16	-	2589	4	ISM	ENSG00000167377.19	ENST00000647773.2	2627	5	5419	0	0	0	3prime_fragment	FALSE	canonical	3	13	junction_3	16.8193010820572	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71455892	False	NA	-2	True	AATAAA	-23	NA	71456828	71447596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_71449886_71453242_71453351_71454041_71454169_71456763
transcript_55235.known	chr16	-	2799	7	FSM	ENSG00000167377.19	ENST00000497160.5	2799	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.3365381652611	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATGAGTACATTTTTAAT	-71461310	True	NA	-2	True	AATAAA	-23	NA	71462246	71447596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449883_71450589_71450716_71453242_71453351_71454041_71454169_71456071_71456122_71456763_71456829_71462209
transcript_55236.known	chr16	-	2358	3	FSM	ENSG00000167377.19	ENST00000539742.5	2358	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGATGAAAAATAAAGAT	-71461316	True	NA	-41	True	NA	NA	NA	71462252	71447635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71449886_71456763_71456829_71462209
transcript_55237.known	chr16	+	2412	3	FSM	ENSG00000140835.10	ENST00000338482.5	2412	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGCCCTTTCTTTCTTGTGT	NA	False	NA	NA	False	AATAGA	-13	NA	71525232	71538746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71525365_71526119_71526313_71536659
transcript_55239.known	chr16	+	2159	2	FSM	ENSG00000140835.10	ENST00000539698.4	2159	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTTTCTTTCTTGTGTGA	71526314	False	NA	NA	False	AATAGA	-15	NA	71526425	71538748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71526496_71536659
transcript_55242.known	chr16	+	742	3	FSM	ENSG00000260886.2	ENST00000656895.1	742	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGAGACCTTCCTCTGCTG	NA	False	NA	NA	False	AATAAA	-26	NA	71564951	71572439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71565123_71566050_71566202_71572019
transcript_55243.known	chr16	+	683	3	FSM	ENSG00000260886.2	ENST00000666821.1	683	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACCACCACTTTGAGA	NA	False	NA	NA	False	AATAAA	-13	NA	71564969	71572426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71565095_71566050_71566202_71572019
transcript_55246.known	chr16	+	2914	3	FSM	ENSG00000140832.11	ENST00000268485.8	2914	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	33	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTCTCCTCAGTTTTTT	71619969	True	NA	6	True	AATAAA	-16	NA	71626183	71636465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71626697_71629366_71629495_71634192
transcript_55247.known	chr16	+	850	2	FSM	ENSG00000140832.11	ENST00000567566.1	850	2	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGCTAGATTTCCTGTG	71619946	True	NA	NA	False	AAAAAG	-17	NA	71626160	71629680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71626697_71629366
transcript_55248.known	chr16	+	2214	3	FSM	ENSG00000140832.11	ENST00000299952.4	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	41	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACGTGTTTTATACCTA	71619972	True	NA	10	True	AATAAA	-20	NA	71626186	71641965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71626697_71629366_71629495_71640389
transcript_55249.known	chr16	-	3593	24	FSM	ENSG00000166747.13	ENST00000393512.7	3593	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_17	52.03143589563	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATGGAGTTAAAAAGAG	NA	False	NA	NA	False	NA	NA	NA	71809201	71732384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71767876_71767886_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_55250.known	chr16	-	6602	23	FSM	ENSG00000166747.13	ENST00000299980.9	6602	23	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_22	22.251984775437	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTCCTTGCTTCTTAC	-71806174	False	2660	-1	True	AATAAA	-25	NA	71808834	71728999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_71733160_71734608_71734708_71738941_71739103_71739233_71739342_71745143_71745271_71745472_71745615_71746587_71746693_71748250_71748379_71749893_71749984_71750209_71750333_71753832_71753888_71756018_71756160_71758807_71758922_71761511_71761568_71764349_71764449_71764645_71764727_71765488_71765585_71769622_71769700_71771155_71771253_71773220_71773363_71774467_71774593_71789278_71789483_71808762
transcript_55252.known	chr16	+	1962	11	FSM	ENSG00000182149.21	ENST00000541571.6	1962	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	337.847243587986	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTCTCTGTTGATCCTG	71893898	False	NA	NA	False	NA	NA	NA	71893933	71927973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71894482_71894720_71894859_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_55258.known	chr16	+	1125	7	FSM	ENSG00000182149.21	ENST00000538850.5	1125	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	313.173363419617	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTGGACAGTGGGAGA	71891116	True	NA	NA	False	NA	NA	NA	71895547	71928152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_55259.known	chr16	+	1245	6	FSM	ENSG00000182149.21	ENST00000538565.5	1245	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	315.269154850264	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGGAAGCTGGGCCCTC	71891099	True	NA	NA	False	NA	NA	NA	71895530	71928339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71921342_71921454_71922473_71922681_71923287_71923381_71924768_71924818_71927613
transcript_5526.known	chr1	-	3599	12	FSM	ENSG00000159592.11	ENST00000290795.7	3599	12	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_11	141.076381632595	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45678244	True	NA	-17	True	AATAAA	-27	NA	45686536	45627303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686411
transcript_55263.known	chr16	+	428	4	FSM	ENSG00000224470.9	ENST00000569119.1	428	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	23.3380947522857	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGCTTACCTGGAGAAGCAG	71841516	True	NA	NA	False	NA	NA	NA	71846047	71885268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71846105_71848009_71848072_71883116_71883404_71885246
transcript_55266.known	chr16	+	7896	3	FSM	ENSG00000224470.9	ENST00000427980.7	7896	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTTGCGCCTTC	71841444	True	NA	19	True	TATAAA	-14	NA	71845975	71857328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71846105_71848009_71848072_71849623
transcript_55267.known	chr16	+	445	2	FSM	ENSG00000224470.9	ENST00000565676.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTAAAAGAAAGCACAAAG	71841537	False	NA	NA	False	NA	NA	NA	71846068	71848418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71846105_71848009
transcript_55268.known	chr16	+	2356	10	FSM	ENSG00000182149.21	ENST00000329908.12	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_8	266.27990471367	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCTACTGTTTGGTCA	71891111	True	NA	23	True	AATAAA	-21	NA	71895542	71929010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923381_71924772_71924818_71927613
transcript_55269.known	chr16	+	2255	9	FSM	ENSG00000182149.21	ENST00000378798.9	2255	9	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	261.558519981667	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTCTCTACTGTTTGGT	71891121	True	NA	21	True	AATAAA	-19	NA	71895552	71929008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71895590_71915625_71915729_71916461_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71924768_71924818_71927613
transcript_5527.nic	chr1	-	3615	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	175.945803075364	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTTTTTTTTCCTGAAA	-45687115	False	NA	-17	True	AATAAA	-27	NA	45687133	45627303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_55270.known	chr16	+	2031	7	FSM	ENSG00000182149.21	ENST00000456820.2	2031	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	329.885670430765	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAGCTGCTAATAAAGTTA	71916463	True	NA	-13	True	NA	NA	NA	71916559	71928974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_71916643_71917046_71917135_71920738_71920823_71921342_71921454_71922473_71922681_71923287_71923385_71927613
transcript_55274.known	chr16	+	4669	9	FSM	ENSG00000102967.12	ENST00000219240.9	4669	9	0	0	0	0	multi-exon	FALSE	canonical	2	180	junction_7	33.843158466668	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTCTGTGACTTACTT	72006567	True	NA	5	True	AATATA	-14	NA	72008743	72027659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123_72021312_72022361_72022476_72023164_72023319_72023473_72023634_72024144
transcript_55288.nic	chr16	+	1113	5	ISM	ENSG00000102967.12	ENST00000219240.9	4669	9	-11	5972	-11	456	5prime_fragment	FALSE	canonical	3	220	junction_4	17.0953209972788	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCGTGGCTCATGCCTGTA	72006556	True	NA	NA	False	AATAAA	-19	NA	72008732	72021687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72021123
transcript_55289.known	chr16	+	607	5	FSM	ENSG00000102967.12	ENST00000574309.5	607	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	100.641380654282	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTCAGGCAAGCCTTT	72006592	True	NA	NA	False	NA	NA	NA	72008768	72024238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72008786_72012049_72012263_72014472_72014673_72017023_72017107_72024144
transcript_5529.nic	chr1	-	3426	12	NIC	ENSG00000159592.11	novel	3599	12	NA	NA	0	-189	combination_of_known_junctions	FALSE	canonical	3	145	junction_11	175.945803075364	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGATTGTCTTGTGTAAGA	-45687115	False	NA	-41	True	AATAAA	-15	NA	45687133	45627492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_45628409_45629575_45629679_45630481_45630607_45633488_45633648_45634095_45634237_45640209_45640404_45642426_45642500_45654542_45654830_45655189_45655320_45659027_45659143_45660183_45661226_45686992
transcript_55296.known	chr16	+	4323	27	FSM	ENSG00000140829.12	ENST00000268482.8	4323	27	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	40.2464302507563	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGTCTGACTTTTTCC	72090558	True	NA	22	True	AATAAA	-22	NA	72093846	72112912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72094052_72096138_72096481_72096821_72097010_72097676_72097782_72098644_72098793_72098926_72099046_72099203_72099281_72099731_72099888_72100435_72100598_72101085_72101194_72101499_72101613_72103073_72103212_72103601_72103789_72103945_72104132_72104485_72104627_72105026_72105138_72105231_72105349_72105516_72105625_72106004_72106118_72107339_72107549_72107644_72107800_72108226_72108383_72108472_72108608_72108799_72108926_72109414_72109511_72110955_72111078_72112412
transcript_55299.known	chr16	-	3427	21	FSM	ENSG00000118557.16	ENST00000237353.15	3427	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	2.97111090334912	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTTGTGGTGAGCTGTTG	NA	False	NA	NA	False	AATAAA	-19	NA	72172155	72119096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72119355_72119850_72120090_72122913_72122989_72123545_72123650_72124766_72124935_72125237_72125406_72125967_72126133_72128656_72128795_72129065_72129234_72130212_72130358_72130532_72130723_72132747_72132992_72136447_72136606_72136692_72136820_72139288_72139400_72140411_72140583_72150607_72150830_72154210_72154460_72164763_72164917_72171196_72171269_72172053
transcript_55304.nnic	chr16	-	931	4	NNC	ENSG00000140830.9	novel	2521	4	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	27.1825107171668	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72093634	False	NA	-3	True	AATAAA	-17	NA	72093657	72084856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_72085176_72088986_72089139_72090617_72090787_72093366
transcript_55307.known	chr16	-	2521	4	FSM	ENSG00000140830.9	ENST00000268483.8	2521	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	21.0765799460496	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCACTGTTAGTTGGGTTTT	-72092251	True	NA	-3	True	AATAAA	-17	NA	72093620	72084856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72086803_72088986_72089139_72090617_72090787_72093366
transcript_5533.known	chr1	-	964	3	FSM	ENSG00000159592.11	ENST00000480083.5	964	3	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	33	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTCTTACCTAATTAAGCA	-45686635	False	NA	NA	False	NA	NA	NA	45686653	45660548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45661226_45685575_45685621_45686411
transcript_55330.nnic	chr16	-	630	7	NIC	ENSG00000261008.8	novel	436	7	NA	NA	-82	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	7.66847804688489	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	NA	False	NA	-8	True	AATAAA	-27	NA	72627814	72521007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_72521042_72522552_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72627534
transcript_55331.known	chr16	-	436	7	FSM	ENSG00000261008.8	ENST00000655530.1	436	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	7.95298686029343	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-72663609	True	NA	-8	True	AATAAA	-27	NA	72664977	72521007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72521042_72522552_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_55333.nnic	chr16	-	1209	6	NIC	ENSG00000261008.8	novel	563	7	NA	NA	-2	799	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	7.6524505878836	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAACAAGTGTTGTTATAA	-72663648	True	NA	NA	False	NA	NA	NA	72665016	72478951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_72479791_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_5534.known	chr1	-	995	3	FSM	ENSG00000159592.11	ENST00000488278.5	995	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	163	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCCCTTTTCCCCTTTCC	-45687115	False	NA	NA	False	TTTAAA	-34	NA	45687133	45660416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45661226_45685575_45685621_45686992
transcript_55340.known	chr16	-	1984	6	FSM	ENSG00000261008.8	ENST00000659470.1	1984	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	7.6524505878836	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTAGTATCTCACGTTGC	-72663646	True	NA	-8	True	AATAAA	-27	NA	72665014	72521007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_72522624_72523331_72523416_72540577_72540612_72555264_72555327_72570450_72570516_72664891
transcript_55349.nic	chr16	-	917	2	ISM	ENSG00000261008.8	ENST00000570035.5	831	5	-7	47586	-2	-46392	5prime_fragment	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGGTGACACATGTATGC	-72663648	True	NA	NA	False	AAAAAG	-19	NA	72665016	72569723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_72570516_72664891
transcript_5535.known	chr1	-	1947	10	FSM	ENSG00000197429.11	ENST00000359942.8	1947	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7.33333333333333	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTGTCAGGGATTTTCA	-45750177	True	NA	NA	False	CATAAA	-38	NA	45750650	45694323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45694516_45700069_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_55350.nic	chr16	-	533	2	ISM	ENSG00000261008.8	ENST00000570152.2	903	9	-39	98840	-39	-93926	5prime_fragment	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGTAAATTTGTTACAG	-72627716	True	NA	NA	False	AATAAA	-25	NA	72627771	72617257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_72617554_72627534
transcript_55363.nnic	chr16	+	785	5	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	-4	-9384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.35607132140714	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	72664267	True	NA	NA	False	AATAAA	-17	NA	72665118	72812308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72713332_72713417_72713946_72713990_72745404_72745467_72811927
transcript_55364.known	chr16	+	2409	5	FSM	ENSG00000259768.7	ENST00000668995.1	2409	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	5.35607132140714	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAGAAAGTGAGTTTTTT	72664271	True	NA	NA	False	NA	NA	NA	72665122	72822781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72665334_72713332_72713417_72713946_72713990_72745404_72745467_72820772
transcript_55366.nic	chr16	+	878	5	NIC	ENSG00000259768.7	novel	1031	6	NA	NA	-4	1	combination_of_known_junctions	FALSE	canonical	3	4	junction_4	5.1234753829798	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGCTCTCGTGATTGT	72664267	True	NA	13	True	AATAAA	-22	NA	72665118	72787587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_72665334_72713332_72713417_72745404_72745467_72781727_72781820_72787162
transcript_55375.nnic	chr16	+	742	4	NNC	ENSG00000259768.7	novel	2409	5	NA	NA	-4	-9384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.12825877028341	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	72664267	True	NA	NA	False	AATAAA	-17	NA	72665118	72812308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72713332_72713417_72745404_72745467_72811927
transcript_55378.nic	chr16	+	788	4	NIC	ENSG00000259768.7	novel	4842	5	NA	NA	2	1	combination_of_known_junctions	FALSE	canonical	2	4	junction_3	5.09901951359278	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGCTCTCGTGATTGT	72664273	True	NA	13	True	AATAAA	-22	NA	72665124	72787587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_72665334_72745404_72745467_72781727_72781820_72787162
transcript_55384.nnic	chr16	+	652	3	NNC	ENSG00000259768.7	novel	1337	4	NA	NA	2	-9384	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAGCTAAATTCAGTCTGT	72664273	True	NA	NA	False	AATAAA	-17	NA	72665124	72812308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_72665334_72745404_72745467_72811927
transcript_55386.known	chr16	+	4842	5	FSM	ENSG00000259768.7	ENST00000563328.4	4842	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.04633819296811	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTTTCACATTACTAT	72664318	True	NA	18	True	AATAAA	-19	NA	72665169	72791624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_72665334_72745404_72745467_72747120_72747183_72781727_72781820_72787162
transcript_5539.known	chr1	-	3117	9	FSM	ENSG00000197429.11	ENST00000396478.4	3117	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	5.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTTCCTTTTTTGCTA	-45750180	True	NA	NA	False	AAAAAG	-7	NA	45750653	45698710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_45700191_45714245_45714467_45716894_45717018_45719202_45719341_45727630_45727799_45729613_45729770_45740900_45741333_45746119_45746462_45750596
transcript_55390.known	chr16	+	1395	8	FSM	ENSG00000103035.11	ENST00000568717.1	1395	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	912.252225236518	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGTGAATGGAGACTGAT	74274110	True	NA	117	True	NA	NA	NA	74296819	74305888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74296989_74299575_74299746_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_55398.known	chr16	+	1631	7	FSM	ENSG00000103035.11	ENST00000219313.9	1631	7	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	143.623350005028	7721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTTCTAGTCGTTTTT	74274104	True	NA	21	True	ATTAAA	-16	NA	74296813	74306288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302_74304395_74305288
transcript_55399.known	chr16	+	931	6	FSM	ENSG00000103035.11	ENST00000568615.2	931	6	0	0	0	0	multi-exon	FALSE	canonical	3	1751	junction_2	157.319293158849	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGGTGTCCTTCTCAAC	74274119	True	NA	1	True	AATAAA	-18	NA	74296828	74304709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74296989_74300114_74300207_74301051_74301145_74301554_74301653_74302211_74302293_74304302
transcript_554.known	SIRV6	+	574	8	FSM	SIRV6A	SIRV602	574	8	0	0	0	0	multi-exon	FALSE	canonical	3	10205	junction_3	6778.77356916727	11149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTGCCTAATTGTTGGT	NA	False	NA	NA	False	NA	NA	NA	1124	11279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_2780_2829_3106_3165_10724_10819_11031_11109_11205
transcript_55400.known	chr16	+	1428	7	FSM	ENSG00000196436.9	ENST00000429990.1	1428	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.9462219947249	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CGAAGAATAAATAAATAATA	74377862	False	NA	NA	False	AAAACA	-32	NA	74377877	74392080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_74378040_74381515_74381699_74385341_74385442_74385553_74385750_74389824_74389886_74389994_74390031_74391390
transcript_55401.known	chr16	-	3626	26	FSM	ENSG00000090863.12	ENST00000447066.6	3626	26	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_25	221.153579215892	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACAAGCTCCTTTGTGCCT	-74594304	True	NA	-84	True	NA	NA	NA	74607112	74452026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74606656
transcript_55402.known	chr16	-	9287	26	FSM	ENSG00000090863.12	ENST00000422840.7	9287	26	0	0	0	0	multi-exon	FALSE	canonical	3	755	junction_19	50.0039358450912	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTGTTAAATCTTCTC	-74594306	True	NA	-14	True	AATAAA	-14	NA	74607114	74447439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_55407.known	chr16	-	8261	27	FSM	ENSG00000090863.12	ENST00000205061.9	8261	27	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	152.140958659314	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTCTGTGGTGACTGGG	-74594306	True	NA	-1	True	AATAAA	-27	NA	74607114	74447426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74452132_74453170_74453335_74456648_74456756_74457873_74457995_74459681_74459790_74462093_74462196_74462487_74462631_74463355_74463480_74465675_74465814_74467755_74467849_74468945_74469064_74469984_74470074_74471172_74471287_74472348_74472412_74474545_74474633_74477395_74477534_74480240_74480395_74483022_74483125_74485795_74485918_74491000_74491216_74492956_74493141_74494759_74494832_74496440_74496645_74503530_74503747_74508838_74508926_74532120_74532154_74606656
transcript_55410.nnic	chr16	-	488	3	NNC	ENSG00000168411.14	novel	4948	13	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	0.5	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661282	True	NA	-11	True	AATAAA	-15	NA	74666874	74621398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_74621750_74665232_74665281_74666785
transcript_55411.nnic	chr16	-	584	3	NNC	ENSG00000168411.14	novel	458	2	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661288	True	NA	-11	True	AATAAA	-15	NA	74666880	74621398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_74621805_74664662_74664746_74666785
transcript_55413.known	chr16	-	841	3	FSM	ENSG00000168411.14	ENST00000575397.5	841	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_2	18	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTTCACAAAGTAATGAA	-74661240	True	NA	NA	False	AATAAA	-11	NA	74666832	74660779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74661452_74664623_74664746_74666785
transcript_55414.nnic	chr16	-	469	2	NNC	ENSG00000168411.14	novel	4948	13	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661301	True	NA	-11	True	AATAAA	-15	NA	74666893	74621398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_74621760_74666785
transcript_55415.nnic	chr16	-	485	2	NNC	ENSG00000168411.14	novel	4948	13	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661308	True	NA	-11	True	AATAAA	-15	NA	74666900	74621398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_-_74621769_74666785
transcript_55416.known	chr16	-	936	2	FSM	ENSG00000168411.14	ENST00000571776.1	936	2	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGGGGCACAATTAATTAAT	-74661277	True	NA	NA	False	NA	NA	NA	74666869	74660599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74661452_74666785
transcript_55417.known	chr16	-	4948	13	FSM	ENSG00000168411.14	ENST00000361070.9	4948	13	0	0	0	0	multi-exon	FALSE	canonical	3	250	junction_12	59.7701616379128	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGGCTCCTAGTGCCTTT	-74661285	True	NA	-11	True	AATAAA	-15	NA	74666877	74621398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74624072_74626342_74626555_74628451_74628667_74630780_74630958_74632522_74632674_74636345_74636578_74637855_74637971_74644361_74644454_74644540_74644736_74649131_74649203_74651919_74652123_74660931_74661452_74666785
transcript_55420.known	chr16	-	2477	11	FSM	ENSG00000168404.13	ENST00000308807.12	2477	11	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	5.97411081249754	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTGGTGGTTTTTTAC	-74700492	True	NA	-1	True	AATAAA	-22	NA	74700862	74671854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74672539_74674959_74675101_74675354_74675405_74675612_74675765_74678898_74678981_74682650_74682787_74685485_74685584_74691276_74691464_74692341_74692417_74695297_74695760_74700452
transcript_55424.known	chr16	-	5878	26	FSM	ENSG00000103091.15	ENST00000262144.11	5878	26	0	0	0	0	multi-exon	TRUE	canonical	3	131	junction_11	22.0943431674264	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTTTGTTTGTTTATTTG	-74981381	True	NA	NA	False	AATAGA	-18	NA	74985123	74871361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74874445_74885652_74885796_74886269_74886397_74887682_74887756_74888168_74888320_74889702_74889816_74892483_74892566_74893678_74893813_74903946_74904101_74908907_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_55427.known	chr16	-	1953	17	FSM	ENSG00000103091.15	ENST00000616369.4	1953	17	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	21.8771427521969	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGTATGGTTATTA	-74981341	True	NA	1	True	ATTAAA	-18	NA	74985083	74908732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74908978_74909500_74909658_74909821_74909918_74912197_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_55430.known	chr16	-	1752	14	FSM	ENSG00000103091.15	ENST00000536050.5	1752	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	53.3256158124325	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTGGGTCATAGACTTC	-74981084	False	3742	NA	False	AAAACA	-22	NA	74984826	74912004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984602
transcript_55431.nic	chr16	-	1591	14	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-56	3385	-16	0	5prime_fragment	FALSE	canonical	3	167	junction_7	12.7148983107713	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGATGAGATTCGGAAGT	-74981397	True	NA	-8	True	AGTAAA	-17	NA	74985139	74912117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_74912363_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_55432.nic	chr16	-	1669	14	NIC	ENSG00000103091.15	novel	550	7	NA	NA	-16	65	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	51.3039440448414	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGATGCAGACTTTCTTTCT	-74981397	True	NA	NA	False	AATAAA	-42	NA	74985139	74915394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_74915718_74915869_74915995_74916126_74916260_74917928_74918009_74921946_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_55441.nic	chr16	-	1458	10	ISM	ENSG00000103091.15	ENST00000616369.4	1953	17	-56	12764	-16	2453	5prime_fragment	FALSE	canonical	3	167	junction_3	10.6851691379301	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAACAGATGATGTGATTT	-74981397	True	NA	NA	False	AAAAAG	-12	NA	74985139	74921496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_74922104_74923925_74924004_74938149_74938267_74942737_74942827_74948518_74948557_74949717_74949799_74951457_74951544_74956474_74956611_74965772_74965823_74984963
transcript_55445.nic	chr16	-	706	3	NIC	ENSG00000103091.15	novel	478	2	NA	NA	-16	52	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	92.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAATAAATAGAGAGGA	-74981397	True	NA	NA	False	AAAAAG	-7	NA	74985139	74962767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_74963248_74965772_74965823_74984963
transcript_55446.known	chr16	-	478	2	FSM	ENSG00000103091.15	ENST00000569421.2	478	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAGAAATAATGAATATTC	-74965812	False	NA	NA	False	NA	NA	NA	74965822	74962819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_74963248_74965772
transcript_55447.nnic	chr16	+	777	6	NNC	ENSG00000186187.12	novel	2046	2	NA	NA	-364	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	196.052033909368	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATATAAAAA	74998561	True	NA	-5	True	TTTAAA	-9	NA	74998659	75108004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_74998700_75084428_75084602_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_5545.nnic	chr1	+	1475	3	NNC	ENSG00000159596.7	novel	1465	3	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	185.5	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	45680682	True	NA	11	True	ATTAAA	-15	NA	45688148	45694436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_45688254_45690973_45691111_45693203
transcript_55451.nnic	chr16	+	616	5	NNC	ENSG00000186187.12	novel	2046	2	NA	NA	-376	0	at_least_one_novel_splicesite	FALSE	canonical	3	37	junction_1	157.328279403291	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTATATAAAAA	NA	False	NA	-5	True	TTTAAA	-9	NA	74998647	75108004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_74998700_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_55453.known	chr16	+	4626	5	FSM	ENSG00000186187.12	ENST00000335325.9	4626	5	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	8.78564169540279	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGCTCAGGTTGGTGTAAC	74994847	True	NA	NA	False	NA	NA	NA	74999023	75110994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75000096_75093571_75093668_75104783_75104890_75106481_75106572_75107732
transcript_55454.known	chr16	+	1234	5	FSM	ENSG00000186187.12	ENST00000567962.5	1234	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	162.841947912692	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTAGTGTCGACTGGTGTT	74999334	False	NA	19	True	TATAAA	-7	NA	74999344	75108028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75000096_75093571_75093668_75104783_75104890_75106481_75106572_75107837
transcript_55456.known	chr16	-	2007	11	FSM	ENSG00000166816.15	ENST00000450168.3	2007	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	7.37631344236401	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCTGGAAGTCAGCAGG	-75116470	True	NA	-9	True	AATAAA	-29	NA	75116780	75111863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114166_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_55458.known	chr16	-	2067	11	FSM	ENSG00000166816.15	ENST00000300051.8	2067	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	11.6451706728583	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGGAAGTCAGCAGGCAGC	-75116457	True	NA	-5	True	AATAAA	-33	NA	75116767	75111859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75112522_75112601_75112714_75112833_75112925_75113534_75113663_75113741_75113871_75113965_75114235_75114525_75114686_75114826_75114969_75115197_75115340_75115547_75115661_75116648
transcript_55463.known	chr16	+	3250	4	FSM	ENSG00000184517.12	ENST00000393430.6	3250	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	19.1369334592098	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTCTTTGTATATGAT	75147901	False	NA	10	True	AATAAA	-17	NA	75148581	75172236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75148663_75152908_75152967_75166769_75166897_75169252
transcript_55467.known	chr16	+	1426	3	FSM	ENSG00000184517.12	ENST00000568079.5	1426	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	22	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATCCCATGAGAACATTAT	75147813	True	NA	NA	False	ATTAAA	-5	NA	75148493	75170470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75148644_75152908_75152967_75169252
transcript_55468.known	chr16	-	2692	3	FSM	ENSG00000050820.17	ENST00000563038.5	2692	3	0	0	0	0	multi-exon	TRUE	canonical	3	679	junction_2	0.5	223	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCAGCTGCCTGAGGGT	-75236426	False	NA	-13	True	AATAAA	-13	NA	75236503	75229036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75230024_75233845_75233936_75234888
transcript_55479.known	chr16	-	608	4	FSM	ENSG00000153774.9	ENST00000565646.5	608	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	468.027776953462	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTAATGTTCCTTCAGCTC	-75418920	True	NA	NA	False	AAGAAA	-8	NA	75433473	75395134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75433288
transcript_55480.known	chr16	-	1293	7	FSM	ENSG00000153774.9	ENST00000283882.4	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_4	96.6443939858329	7935	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACCTCGCTCACCTTCCCT	-75418950	True	NA	17	True	AATAAA	-41	NA	75433503	75293709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75294043_75305023_75305183_75395089_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_55481.known	chr16	-	1167	5	FSM	ENSG00000153774.9	ENST00000566901.5	1167	5	0	0	0	0	multi-exon	FALSE	canonical	3	911	junction_2	59.9723894804934	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75418908	True	NA	NA	False	NA	NA	NA	75433461	75394681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75395210_75411824_75411953_75412534_75412755_75414577_75414696_75433288
transcript_55486.known	chr16	-	2331	3	FSM	ENSG00000166822.13	ENST00000569540.5	2331	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	55.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAGAAAAA	-75464394	False	4129	5	True	NA	NA	NA	75464416	75445713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75447689_75451668_75451840_75464231
transcript_55488.known	chr16	-	547	3	FSM	ENSG00000166822.13	ENST00000566980.1	547	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTTCATGTGTACCTTT	-75464715	False	NA	NA	False	AAAACA	-40	NA	75464737	75447309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75447689_75451737_75451840_75464671
transcript_55491.nic	chr16	-	835	3	NIC	ENSG00000166822.13	novel	5028	3	NA	NA	-37	74	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	68.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGCAAACTCTTTTCTTT	NA	False	NA	-23	True	ATTAAA	-24	NA	75464774	75447127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_75447689_75451668_75451840_75464671
transcript_55492.nic	chr16	-	855	3	NIC	ENSG00000166822.13	novel	2331	3	NA	NA	-13	68	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	23.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTTGGCAAACTCTT	-75464407	False	4129	-29	True	ATTAAA	-18	NA	75464429	75447133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_75447689_75451737_75451840_75464231
transcript_55497.nnic	chr16	-	887	3	NIC	ENSG00000183196.10	novel	2000	4	NA	NA	-23	57	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	8	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGTGTTGTGGTGGTTT	-75493273	True	NA	0	True	AATAAA	-23	NA	75495407	75473123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_75473468_75481816_75481892_75494939
transcript_55499.nnic	chr16	-	924	3	NIC	ENSG00000183196.10	novel	8370	3	NA	NA	-23	53	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	11	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTTGAGTGTTGTGGTG	-75493273	True	NA	-4	True	AATAAA	-19	NA	75495407	75473127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_75473509_75481816_75481892_75494939
transcript_55501.known	chr16	-	1869	11	FSM	ENSG00000065457.11	ENST00000307921.7	1869	11	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_10	15.9172862008572	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATCTGACTTCCATTGTGT	-75620966	True	NA	-77	True	NA	NA	NA	75623300	75600001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402_75622465_75623237
transcript_55503.known	chr16	-	5757	10	FSM	ENSG00000065457.11	ENST00000564657.2	5757	10	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	10.9420471147646	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAAATGTTTTGTTTATCC	-75620947	True	NA	-26	True	AATAAA	-16	NA	75623281	75596867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618641_75620265_75620335_75620630_75620821_75622402
transcript_55506.known	chr16	-	4247	7	FSM	ENSG00000205084.12	ENST00000258173.11	4247	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.989442215108	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGCTGGTTTATTTCCT	-75555446	True	NA	0	True	TATAAA	-17	NA	75556252	75536740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75545955_75555803_75555974_75556070
transcript_55507.known	chr16	-	2991	7	FSM	ENSG00000205084.12	ENST00000562410.5	2991	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.9678941051794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGTCAAAATGGAAG	-75555462	True	NA	-17	True	AATAAA	-13	NA	75556268	75538135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75540175_75541349_75541456_75542601_75542684_75545351_75545496_75545825_75546078_75555803_75555974_75556070
transcript_55509.known	chr16	+	974	4	FSM	ENSG00000034713.8	ENST00000037243.7	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	671	junction_1	6.54896090146283	7217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	75549190	True	NA	NA	False	AATAAA	-19	NA	75566378	75577881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75566521_75566851_75566908_75568036_75568210_75577278
transcript_5551.known	chr1	+	722	2	FSM	ENSG00000159596.7	ENST00000496366.1	722	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTAGTAGTTAAAAGTAG	45680729	True	NA	NA	False	NA	NA	NA	45688195	45693845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45688276_45693203
transcript_55510.known	chr16	+	791	3	FSM	ENSG00000034713.8	ENST00000563744.1	791	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	315	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACTGTGGCCATGTCCT	75549200	True	NA	NA	False	AATAAA	-19	NA	75566388	75577881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75566521_75566851_75566908_75577278
transcript_55513.known	chr16	+	668	1	FSM	ENSG00000276408.1	ENST00000621911.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTACTGTGTGTGTGCCTTT	75556294	False	NA	NA	False	GATAAA	-18	NA	75556391	75557059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75556400_75557100
transcript_55514.known	chr16	-	2768	10	FSM	ENSG00000065457.11	ENST00000566445.5	2768	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	25.0288722167908	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-75622403	False	NA	NA	False	NA	NA	NA	75622466	75599099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75600349_75603084_75603172_75608223_75608324_75608842_75608989_75612242_75612862_75617141_75617273_75618585_75618699_75620265_75620335_75620630_75620821_75622402
transcript_55515.known	chr16	+	2131	3	FSM	ENSG00000166848.7	ENST00000300086.5	2131	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	2.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTCGTCAATAAGTGTTTT	75646482	True	NA	52	True	AATAAA	-18	NA	75647772	75657432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75648553_75654272_75654398_75656206
transcript_55516.known	chr16	+	639	3	FSM	ENSG00000166848.7	ENST00000569234.1	639	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	73.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGGAGGCTACTTCCG	75647105	False	NA	NA	False	NA	NA	NA	75648395	75656433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_75648683_75654272_75654398_75656206
transcript_5553.known	chr1	+	1465	3	FSM	ENSG00000159596.7	ENST00000372025.5	1465	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	8.5	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGAGTCTTGTGATC	45680714	True	NA	11	True	ATTAAA	-15	NA	45688180	45694436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_45688276_45690973_45691111_45693203
transcript_55533.known	chr16	-	1991	14	FSM	ENSG00000065427.15	ENST00000302445.8	1991	14	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_13	120.738016544307	3556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATTTGTCTCTTCTCTTT	-75633567	True	NA	-49	True	ATTAAA	-30	NA	75647665	75627723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75647577
transcript_55534.known	chr16	-	2421	15	FSM	ENSG00000065427.15	ENST00000319410.9	2421	15	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_14	311.881158685255	1368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTTCTTTCTGGTGGTGG	-75633567	True	NA	-21	True	AGTAAA	-3	NA	75647665	75627473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75640183_75640350_75641563_75641724_75644282_75644463_75647577
transcript_55535.known	chr16	-	1942	14	FSM	ENSG00000065427.15	ENST00000564578.5	1942	14	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_11	396.479507667168	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGAGACAAGGAATTAAAAAT	-75633550	True	NA	-95	True	NA	NA	NA	75647648	75627769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_75627994_75628568_75628713_75629414_75629542_75630422_75630509_75631167_75631254_75631415_75631590_75631692_75631856_75634172_75634293_75635679_75635806_75635911_75636099_75636453_75636548_75641563_75641724_75644282_75644463_75647577
transcript_55536.known	chr16	-	569	1	FSM	ENSG00000244485.1	ENST00000478088.1	569	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGATCCTACTCTCTTA	NA	False	NA	NA	False	NA	NA	NA	76235623	76235054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_76235100_76235600
transcript_55538.known	chr16	+	5813	6	FSM	ENSG00000103111.15	ENST00000248248.8	5813	6	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	8.18290901819151	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTACTGTGCTGGCCAT	77189471	True	NA	14	True	AATAAA	-15	NA	77191189	77202398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77191259_77191475_77191634_77193450_77193778_77194334_77195155_77195534_77195683_77198107
transcript_5554.known	chr1	-	5174	11	FSM	ENSG00000117461.15	ENST00000420542.5	5174	11	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	16.004999218994	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTTTGTCTTCATGCTA	-46132994	False	NA	NA	False	AATAAA	-17	NA	46133036	46040141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846_46131957_46132783
transcript_55541.known	chr16	+	1759	5	FSM	ENSG00000103111.15	ENST00000439557.6	1759	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	55.8435314069589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGGTGTCTAGGGTGGCCC	77189473	True	NA	NA	False	NA	NA	NA	77191191	77198673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77191259_77191475_77191634_77194334_77195155_77195534_77195683_77198107
transcript_55543.nic	chr16	+	402	4	ISM	ENSG00000205078.6	ENST00000378644.5	1057	11	12698	212	-302	-2	3prime_fragment	FALSE	canonical	3	15	junction_1	20.8539897594894	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCGCGTTCTCCGCGGAG	NA	False	NA	9	True	AATAAA	-19	NA	77212105	77213003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_77212200_77212281_77212370_77212573_77212647_77212856
transcript_5555.known	chr1	-	5596	10	FSM	ENSG00000117461.15	ENST00000262741.10	5596	10	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	8.30142037526793	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTCTTCATGCTATG	-46131501	True	NA	NA	False	AATAAA	-19	NA	46132629	46040139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46043872_46045917_46046089_46046550_46046626_46055794_46055972_46061928_46062072_46066053_46066180_46066910_46067092_46077514_46077614_46080641_46080751_46131846
transcript_55555.known	chr16	+	652	3	FSM	ENSG00000260922.2	ENST00000561672.1	652	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTCGAGTGGTAGTT	77234850	False	NA	NA	False	AGTAAA	-26	NA	77234876	77290934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77234950_77289275_77289456_77290535
transcript_55556.known	chr16	+	213	2	FSM	ENSG00000205078.6	ENST00000563157.1	213	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGCGTTCTCCGCGGAGTC	77212479	False	NA	11	True	AATAAA	-21	NA	77212592	77213005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77212647_77212846
transcript_55560.known	chr16	+	899	5	FSM	ENSG00000140876.11	ENST00000564085.5	899	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	41.1885906532379	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAACTATTCACGAGGATT	77721826	True	NA	NA	False	CATAAA	-41	NA	77722513	77741969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77736649_77736744_77741581
transcript_55561.known	chr16	+	1096	4	FSM	ENSG00000140876.11	ENST00000268533.9	1096	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	43.1508980207828	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCATTTACCTTAT	77721826	True	NA	NA	False	AATAAA	-19	NA	77722513	77742260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77735827_77735987_77741581
transcript_55563.nnic	chr16	+	1076	4	NIC	ENSG00000140876.11	novel	899	5	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	52.3259018078045	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACCATGTGGCATTTACCT	NA	False	NA	123	True	AATAAA	-16	NA	77722465	77742257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_77722618_77725430_77725585_77736649_77736744_77741581
transcript_55564.known	chr16	+	678	3	FSM	ENSG00000140876.11	ENST00000568787.5	678	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	37.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGAGATGCTTCAGAATT	77721828	True	NA	NA	False	NA	NA	NA	77722515	77736249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77735827
transcript_55565.known	chr16	+	930	3	FSM	ENSG00000140876.11	ENST00000437314.3	930	3	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	32.5	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCATGTGGCATTTACCTT	77721831	True	NA	NA	False	AATAAA	-17	NA	77722518	77742258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77725430_77725585_77741581
transcript_55567.known	chr16	+	316	2	FSM	ENSG00000140876.11	ENST00000563839.1	316	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGGCCTTTATCATTTT	77721857	True	NA	NA	False	NA	NA	NA	77722544	77741824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77722618_77741581
transcript_55568.known	chr16	+	3791	9	FSM	ENSG00000171724.3	ENST00000302536.3	3791	9	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_8	9.95536915438097	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCATCTGCTATTCCAC	77787043	True	NA	18	True	AATAAA	-24	NA	77788563	77980107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_77788916_77816920_77817051_77825245_77825462_77862747_77862891_77876369_77876474_77879168_77879225_77884607_77884803_77971849_77971934_77977596
transcript_55573.known	chr16	+	710	6	FSM	ENSG00000186153.18	ENST00000355860.7	710	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	28.082734909549	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTACATCTTCTTTTGTGG	78096237	True	NA	7	True	AATAAA	-21	NA	78099678	78278696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975_78115155_78164182_78164290_78278602
transcript_55579.known	chr16	+	448	4	FSM	ENSG00000186153.18	ENST00000565562.5	448	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	33.5095342982992	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCGTTCGGGGCCACTAC	78096292	True	NA	NA	False	GATAAA	-13	NA	78099733	78111992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78111819
transcript_5558.nnic	chr1	+	563	3	NNC	ENSG00000227857.2	novel	339	2	NA	NA	-1364	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCAATATGATAATTGTG	46133136	True	NA	NA	False	AATAAA	-34	NA	46133166	46139081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46133391_46134530_46134655_46138866
transcript_55580.known	chr16	+	6142	4	FSM	ENSG00000186153.18	ENST00000682609.1	6142	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_3	9.10433352249844	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGACTCCGTCTCAAAA	78099381	True	NA	NA	False	NA	NA	NA	78099451	78120560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099886_78108422_78108488_78109777_78109836_78114975
transcript_55581.nic	chr16	+	1103	3	ISM	ENSG00000186153.18	ENST00000565562.5	448	4	-306	1635	-22	-1635	5prime_fragment	FALSE	canonical	3	79	junction_1	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGGGAATGCACTGTG	78099399	False	NA	NA	False	NA	NA	NA	78099427	78110357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_78099886_78108422_78108488_78109777
transcript_55585.known	chr16	+	525	1	FSM	ENSG00000186153.18	ENST00000569818.1	525	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTCAGCTCCCTCCTGC	78096233	True	NA	6	True	AATAAA	-19	NA	78099674	78100199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78099700_78100200
transcript_55586.known	chr16	+	450	2	FSM	ENSG00000186153.18	ENST00000620008.1	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGAGAACAGCTTCTGGC	NA	False	NA	NA	False	NA	NA	NA	78424870	78432752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_78425056_78432487
transcript_55587.known	chr16	-	2669	2	FSM	ENSG00000178573.7	ENST00000326043.5	2669	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCCTCTGTGTGATTTTTT	-79600595	True	NA	NA	False	AATACA	-17	NA	79600737	79593837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_79594554_79598784
transcript_55589.known	chr16	+	492	4	FSM	ENSG00000168589.15	ENST00000562982.5	492	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGACCCTTCAAACATT	NA	False	NA	NA	False	ATTAAA	-15	NA	80540733	80550641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_80540855_80543275_80543352_80549483_80549652_80550514
transcript_5559.known	chr1	-	2719	22	FSM	ENSG00000085998.15	ENST00000371984.8	2719	22	0	0	0	0	multi-exon	FALSE	canonical	3	357	junction_1	36.6534298927467	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTCTTGTGATTGTGATT	-46195329	True	NA	-11	True	ATTAAA	-20	NA	46198434	46188682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46189358_46189457_46189568_46189853_46189990_46190472_46190518_46190719_46190785_46192097_46192224_46192307_46192437_46192517_46192591_46192899_46192959_46193173_46193216_46193304_46193389_46193563_46193640_46193854_46193926_46194273_46194402_46194552_46194652_46194843_46194962_46195810_46195925_46196011_46196078_46196730_46196850_46196969_46197085_46197701_46197872_46198335
transcript_55590.known	chr16	+	628	4	FSM	ENSG00000168589.15	ENST00000305904.11	628	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCGCTCCTTGTGATAA	NA	False	NA	NA	False	AATACA	-22	NA	80540992	80550811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_80541080_80543275_80543352_80549483_80549652_80550514
transcript_55593.nnic	chr16	-	688	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	-35	-254	-24	5	multi-exon	FALSE	canonical	3	73	junction_1	557	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTTTCTCTTAGATTCT	-80997786	True	NA	NA	False	AATAAA	-20	NA	81006921	80975795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_55594.known	chr16	-	2271	3	FSM	ENSG00000286221.1	ENST00000650881.1	2271	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTTGGAGTCGTTCATT	-80997745	True	NA	NA	False	AATAAA	-18	NA	81006880	80828737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80830758_80840118_80840223_81006733
transcript_55617.known	chr16	-	640	6	FSM	ENSG00000103121.9	ENST00000565925.5	640	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	384.781808301796	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-80997740	True	NA	NA	False	AATAAA	-43	NA	81006875	80976049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_55618.known	chr16	-	573	6	FSM	ENSG00000103121.9	ENST00000562713.3	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	381.877153021754	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCCAGAGGAATCCGAAAA	-80997723	True	NA	NA	False	AAGAAA	-10	NA	81006858	80976116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80980769_80980880_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_5562.known	chr1	+	1849	2	FSM	ENSG00000171357.6	ENST00000371980.4	1849	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	111	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGGGGATCTCACTTCC	46202573	True	NA	3	True	AATAGA	-15	NA	46203333	46221256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46203625_46219698
transcript_55627.known	chr16	-	671	5	FSM	ENSG00000103121.9	ENST00000565650.5	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	472.307831292262	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGGCAGGGCGTTTAGTAC	-80997759	True	NA	NA	False	NA	NA	NA	81006894	80975927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80981805_80981878_80997313_80997430_80998284_80998355_81006733
transcript_55628.nic	chr16	-	839	5	NIC	ENSG00000103121.9	novel	573	6	NA	NA	-22	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_3	467.998130338146	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	-80997784	True	NA	NA	False	AATAAA	-14	NA	81006919	80975801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_80976180_80981805_80981878_80997313_80997430_81001247_81001335_81006733
transcript_55630.known	chr16	-	1560	5	FSM	ENSG00000140905.11	ENST00000315467.9	1560	5	0	0	0	0	multi-exon	FALSE	canonical	3	2111	junction_3	104.972317779498	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATGGACTCTGATAGTATT	-81087907	True	NA	NA	False	AATAAA	-34	NA	81096395	81081944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084595_81087600_81087665_81090600_81090681_81096130
transcript_55639.known	chr16	-	424	4	FSM	ENSG00000103121.9	ENST00000564174.5	424	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	18.624953392932	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTAAAGACTCTGGGTT	-80997719	True	NA	NA	False	AATAAA	-33	NA	81006854	80976059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80997313_80997430_80998284_80998352_81006733
transcript_55642.known	chr16	-	975	4	FSM	ENSG00000140905.11	ENST00000564386.6	975	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	1042.37325368603	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCGTTAATCATGTTT	-81087777	False	NA	-19	True	AATAAA	-4	NA	81096265	81082335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084595_81090600_81090681_81096130
transcript_55644.known	chr16	-	612	3	FSM	ENSG00000103121.9	ENST00000569187.5	612	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	400	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATTTTTTTCTCCTTTCTCT	-80997762	True	NA	NA	False	AATAAA	-12	NA	81006897	80975803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80981805_80981878_81006733
transcript_55646.known	chr16	-	403	3	FSM	ENSG00000140905.11	ENST00000561801.2	403	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_2	1167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGTCTTAAATTAGTGG	-81087769	False	NA	NA	False	AATAAA	-27	NA	81096257	81082819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084595_81096130
transcript_55648.known	chr16	-	766	4	FSM	ENSG00000103121.9	ENST00000486645.5	766	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	501.355717585384	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTCTCCTTTCTCTTA	-80997760	True	NA	NA	False	AATAAA	-14	NA	81006895	80975801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80980769_80980880_80997313_80997430_81006733
transcript_55649.known	chr16	-	399	3	FSM	ENSG00000103121.9	ENST00000565108.5	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	557	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTGGGTTGATACCTGAA	-80997751	True	NA	NA	False	AATAAA	-43	NA	81006886	80976049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80997313_80997430_81006733
transcript_55650.known	chr16	-	438	4	FSM	ENSG00000103121.9	ENST00000562828.5	438	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	397.393451827726	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGCTAGGACGACAGG	-80997757	True	NA	NA	False	NA	NA	NA	81006892	80980788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80980880_80981805_80981878_80997313_80997430_81006733
transcript_55651.known	chr16	+	1398	7	FSM	ENSG00000166451.14	ENST00000299572.9	1398	7	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_6	149.707121481318	5653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTATTGTGTTTTATACCA	81006460	False	NA	25	True	AATAAA	-27	NA	81006551	81022885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81022754
transcript_55652.known	chr16	+	971	10	FSM	ENSG00000166451.14	ENST00000428963.6	971	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	459.246914409952	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTCTTAAGCACAGCTCC	80995278	True	NA	22	True	GATAAA	-13	NA	81007243	81028660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017325_81017386_81017757_81017835_81020099_81020277_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_55653.known	chr16	+	1699	10	FSM	ENSG00000166451.14	ENST00000439957.7	1699	10	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	436.82357938437	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCACATCAGTTAATTTTG	80995241	True	NA	3	True	AATAAA	-14	NA	81007206	81029309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81007278_81011929_81012111_81014135_81014182_81017757_81017835_81020099_81020277_81022596_81022699_81024714_81024779_81026525_81026639_81028170_81028298_81028568
transcript_55654.known	chr16	+	461	4	FSM	ENSG00000166451.14	ENST00000562943.1	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	490.051244485944	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTTATAATTGTATTGT	81017743	False	NA	14	True	AATAAA	-16	NA	81017754	81022874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_81017835_81020099_81020277_81022596_81022653_81022726
transcript_55655.known	chr16	-	840	4	FSM	ENSG00000140905.11	ENST00000640150.1	840	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1064.02798626519	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATCATGTTTGTTTTGAT	-81082180	False	8488	-11	True	AATAAA	-12	NA	81090668	81082327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81082964_81084462_81084535_81087600_81087665_81090600
transcript_55656.known	chr16	-	801	5	FSM	ENSG00000103121.9	ENST00000570086.5	801	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	519.931425766899	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAATTTTTTTCTCCTTTC	-80997740	True	NA	NA	False	AATAAA	-9	NA	81006875	80975806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_80976180_80981805_80981878_80996922_80997021_80997313_80997430_81006733
transcript_55658.known	chr16	-	1488	7	FSM	ENSG00000166473.17	ENST00000531391.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.21108319357027	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCTCTGGGATCTGCT	-81181282	True	NA	0	True	AATAAA	-16	NA	81181329	81170288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_81170806_81170942_81171075_81174719_81174915_81175604_81175751_81177806_81177984_81179644_81179787_81181150
transcript_55665.nnic	chr16	+	833	5	NNC	ENSG00000197943.11	novel	8666	33	NA	NA	1043	1564	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	19.0262975904404	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTAAGCCTTCTGTTGC	81939658	True	NA	5	True	AATAAA	-18	NA	81939670	81958294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_81939723_81939891_81940060_81946174_81946264_81956694_81956880_81957955
transcript_55670.nnic	chr16	-	750	4	NIC	ENSG00000261235.1	novel	566	3	NA	NA	-110	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCTCATTTCTCC	-82139607	True	NA	-3	True	AATAAA	-14	NA	82139741	82044335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_82044606_82052292_82052459_82063092_82063254_82139588
transcript_55676.nnic	chr16	-	552	3	NIC	ENSG00000261235.1	novel	829	4	NA	NA	-110	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	1.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATGCATCTATCAGGAATA	-82139607	True	NA	-38	True	NA	NA	NA	82139741	82044370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_82044609_82063092_82063254_82139588
transcript_55678.known	chr16	-	566	3	FSM	ENSG00000261235.1	ENST00000561826.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTGTCTCATTTCTCC	NA	False	NA	-3	True	AATAAA	-14	NA	82063222	82044335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82044606_82052292_82052459_82063092
transcript_5568.nic	chr1	+	2592	18	NIC	ENSG00000085999.13	novel	2549	19	NA	NA	-102	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	93.5237512160547	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTGAGAGCAGTGT	NA	False	NA	21	True	AATAAA	-14	NA	46247585	46278472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_46247747_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_55698.known	chr16	-	503	3	FSM	ENSG00000135698.10	ENST00000567729.1	503	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTAAAATTGATACTGATG	-82160578	True	NA	NA	False	NA	NA	NA	82170218	82164074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82164195_82164651_82164941_82170124
transcript_55699.known	chr16	-	1101	5	FSM	ENSG00000135698.10	ENST00000258169.9	1101	5	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_3	22.4874965258474	5516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTATATTTTCTTGTAC	-82160584	True	NA	-8	True	AATAAA	-17	NA	82170224	82148161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82148864_82149308_82149404_82151423_82151515_82164081_82164195_82170124
transcript_5570.known	chr1	+	3078	18	FSM	ENSG00000085999.13	ENST00000371975.9	3078	18	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_7	39.6693949998482	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGCCTGAGAGCAGTGTG	46242905	True	NA	22	True	AATAAA	-15	NA	46247762	46278473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_55700.known	chr16	-	392	2	FSM	ENSG00000135698.10	ENST00000569021.1	392	2	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCCTTTTTTACATTG	-82160557	True	NA	NA	False	NA	NA	NA	82170197	82163875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_82164195_82170124
transcript_55714.known	chr16	-	4377	23	FSM	ENSG00000140943.18	ENST00000343411.8	4377	23	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_14	23.4344963640081	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATACTGTGTAACGGACTCT	-84112641	True	NA	-21	True	AATAAA	-27	NA	84116942	84053762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84054646_84056004_84056136_84059301_84059429_84060681_84060814_84063304_84063446_84065689_84065768_84066488_84066614_84067666_84067824_84068338_84068455_84069865_84070039_84070587_84070777_84074596_84074742_84081746_84081909_84084982_84085135_84087357_84087461_84090874_84090943_84091731_84091849_84093187_84093298_84093710_84093822_84095601_84095806_84099052_84099311_84101620_84102108_84116734
transcript_55719.known	chr16	+	521	1	FSM	ENSG00000260018.1	ENST00000565382.1	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	211	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTCTGGGTGACTTAGAT	84116788	True	NA	30	True	AATAAA	-36	NA	84117050	84117571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84117000_84117600
transcript_55724.known	chr16	-	1493	7	FSM	ENSG00000103160.12	ENST00000434463.7	1493	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	101.250514401985	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGAAAATGCTGCACTTCA	-84142133	True	NA	-45	True	NA	NA	NA	84145169	84124122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130172_84130336_84130432_84131101_84131328_84135543_84135606_84145079
transcript_55727.known	chr16	-	3648	6	FSM	ENSG00000103160.12	ENST00000219439.9	3648	6	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_3	29.9372677444018	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTATAACTATGTGCCT	-84142141	True	NA	-12	True	ATTAAA	-23	NA	84145177	84122140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84124729_84129547_84129776_84129985_84130432_84131101_84131328_84135543_84135606_84145079
transcript_55739.known	chr16	-	542	3	FSM	ENSG00000103160.12	ENST00000567294.5	542	3	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_2	31	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCATTTTCTTACTGCT	-84142156	True	NA	-1	True	AATAAA	-30	NA	84145192	84130960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84131328_84135543_84135606_84145079
transcript_55740.known	chr16	-	533	2	FSM	ENSG00000103160.12	ENST00000565275.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCATTAAGAATGTGGGA	NA	False	NA	28	True	NA	NA	NA	84123344	84122677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84122839_84122972
transcript_55746.known	chr16	-	5013	8	FSM	ENSG00000140950.16	ENST00000343629.11	5013	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	43.2647285290672	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGACAAAAACTATATTTTG	-84503056	True	NA	NA	False	ATTAAA	-20	NA	84504659	84476354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84480027_84480528_84480709_84482591_84482711_84486630_84487060_84489277_84489423_84495682_84495914_84497933_84498112_84504600
transcript_55749.nic	chr16	-	747	4	ISM	ENSG00000140950.16	ENST00000343629.11	5013	8	-39	12828	-8	169	5prime_fragment	FALSE	canonical	0	0	junction_2	47.588514020367	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGCGTGAGCCCTCGAAC	-84503095	True	NA	NA	False	AGTAAA	-13	NA	84504698	84489182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_-_84489423_84495682_84495914_84497933_84498112_84504600
transcript_55751.known	chr16	-	1842	4	FSM	ENSG00000103187.8	ENST00000262428.5	1842	4	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_3	79.4243175747971	512	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTCTGATTTGT	-84599488	True	NA	-2	True	AATAAA	-24	NA	84618078	84565595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_84566956_84590104_84590263_84617500_84617584_84617837
transcript_55753.known	chr16	+	3328	14	FSM	ENSG00000103194.16	ENST00000219473.12	3328	14	0	0	0	0	multi-exon	FALSE	canonical	3	1244	junction_4	129.575958395386	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678757	True	NA	17	True	AATAAA	-21	NA	84699999	84779922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632_84745674_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_55763.known	chr16	+	1315	12	FSM	ENSG00000103194.16	ENST00000563048.5	1315	12	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	418.126359958999	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGTGAAACCAACTGCTG	84678761	True	NA	NA	False	NA	NA	NA	84700003	84779015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733434_84733504_84758715_84758808_84759362_84759473_84759890_84759947_84760171_84760276_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_55771.nic	chr16	+	1893	8	NIC	ENSG00000103194.16	novel	3070	11	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_2	521.404696126586	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGTGTGCGTGTTTCTTTG	84678728	True	NA	17	True	AATAAA	-21	NA	84699970	84779922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_84700112_84733434_84733504_84762988_84763089_84764085_84764264_84768192_84768359_84772540_84772686_84775159_84775226_84778894
transcript_55779.known	chr16	+	888	5	FSM	ENSG00000103194.16	ENST00000562743.5	888	5	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	665.262730054826	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGCCCCGGGGCTGATTTT	84678743	True	NA	NA	False	NA	NA	NA	84699985	84745211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733052_84733106_84733434_84733504_84740308_84740370_84744632
transcript_55782.nic	chr16	+	562	4	ISM	ENSG00000103194.16	ENST00000219473.12	3328	14	-29	34999	-15	0	5prime_fragment	FALSE	canonical	3	1371	junction_3	92.7086235950512	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGTAAAAAGAAGAAAAAG	84678728	True	NA	NA	False	NA	NA	NA	84699970	84744923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632
transcript_55784.nic	chr16	+	1728	4	ISM	ENSG00000103194.16	ENST00000219473.12	3328	14	-29	33833	-15	878	5prime_fragment	FALSE	canonical	3	1371	junction_3	92.7086235950512	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTTTTTTTTTTTTGGA	84678728	True	NA	14	True	AAGAAA	-17	NA	84699970	84746089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_84700112_84733434_84733504_84740308_84740370_84744632
transcript_55787.known	chr16	+	569	5	FSM	ENSG00000103194.16	ENST00000562283.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	694.018911846068	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCGTAAAAAGAAGAAAAAG	84678761	True	NA	NA	False	NA	NA	NA	84700003	84744923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84700112_84733052_84733106_84733447_84733504_84740308_84740370_84744632
transcript_55788.known	chr16	+	4583	15	FSM	ENSG00000103196.12	ENST00000262424.10	4583	15	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.7196403483336	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCAGGCTCTGGACTGT	84819879	True	NA	4	True	AATAAA	-14	NA	84819984	84909508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_84820134_84838421_84838736_84845785_84845905_84849384_84849518_84850567_84850684_84854728_84854830_84866896_84867041_84868850_84868912_84872441_84872509_84872991_84873123_84873919_84873964_84877437_84877511_84880508_84880585_84889229_84889364_84906587
transcript_55790.nic	chr16	+	345	2	ISM	ENSG00000278214.1	ENST00000612023.1	2005	3	-71	5412	-71	-5412	5prime_fragment	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGTGCCGTGCGGGGCAG	NA	False	NA	NA	False	AATAAA	-19	NA	85137078	85144031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_85137210_85143817
transcript_55791.known	chr16	-	601	3	FSM	ENSG00000270124.1	ENST00000602862.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCCTTGTCTACTGTCT	-85583541	True	NA	NA	False	NA	NA	NA	85583571	85580008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85580230_85582018_85582170_85583342
transcript_55794.known	chr16	-	2628	5	FSM	ENSG00000131153.9	ENST00000253462.8	2628	5	0	0	0	0	multi-exon	FALSE	canonical	3	950	junction_4	34.4310906013736	1402	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGAAGATTTTATTTTT	-85677421	True	NA	0	True	CATAAA	-23	NA	85688954	85676197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85678338_85678539_85678667_85681581_85681682_85687459_85687575_85688808
transcript_55795.known	chr16	-	744	4	FSM	ENSG00000154102.11	ENST00000602675.5	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	31.5629881700422	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	-85750330	False	NA	87	True	AATAAA	-17	NA	85750951	85707516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85708067_85710163_85710286_85735189_85735236_85750925
transcript_55796.known	chr16	-	911	4	FSM	ENSG00000154102.11	ENST00000284245.9	911	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	22.69116323349	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGAATCCTTTTTTTTTT	-85750475	True	NA	87	True	AATAAA	-17	NA	85751096	85707516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_85708067_85710163_85710308_85735189_85735236_85750925
transcript_55809.known	chr16	+	716	5	FSM	ENSG00000131143.10	ENST00000561569.5	716	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	2795.26877061938	10722	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTGATCAGTTCTTT	85727306	True	NA	30	True	AATAAA	-19	NA	85799696	85807002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799753_85801183_85801279_85804936_85805105_85805732_85805865_85806737
transcript_55813.known	chr16	+	873	5	FSM	ENSG00000131143.10	ENST00000562336.5	873	5	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_1	2722.21164680485	6308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTAAAACAATAGGTTTCTC	85727302	True	NA	-21	True	AATGAA	-6	NA	85799692	85807044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799885_85801204_85801279_85804936_85805105_85805732_85805865_85806737
transcript_55825.known	chr16	+	490	5	FSM	ENSG00000131143.10	ENST00000566405.5	490	5	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	2623.9798374797	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGAAGGTGAACCCCAT	85727307	True	NA	NA	False	NA	NA	NA	85799697	85806802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799753_85801204_85801279_85804940_85805105_85805732_85805865_85806737
transcript_55826.known	chr16	+	617	5	FSM	ENSG00000131143.10	ENST00000564544.1	617	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	2798.55467161176	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAATAAATGACCAGTTTA	85727317	True	NA	3	True	NA	NA	NA	85799707	85806975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799753_85801204_85801279_85804936_85805154_85805732_85805865_85806826
transcript_55827.known	chr16	+	1235	3	FSM	ENSG00000131143.10	ENST00000564648.1	1235	3	0	0	0	0	multi-exon	FALSE	canonical	3	6201	junction_1	398	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACCACTGCTAATAAATGA	85801087	True	NA	-5	True	NA	NA	NA	85801201	85806967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85801279_85804936_85805865_85806737
transcript_55828.known	chr16	+	1481	3	FSM	ENSG00000131143.10	ENST00000564903.1	1481	3	0	0	0	0	multi-exon	FALSE	canonical	3	6140	junction_2	30.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACCACTGCTAATAAATGAC	85801087	True	NA	-4	True	NA	NA	NA	85801201	85806968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85801279_85804936_85805105_85805732
transcript_55829.known	chr16	+	471	4	FSM	ENSG00000131143.10	ENST00000566115.5	471	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	2329.20988033854	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGAGTGTGGGTATTGAA	85727247	True	NA	NA	False	NA	NA	NA	85799637	85805096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_85799753_85801204_85801279_85804539_85804662_85804936
transcript_55832.nnic	chr16	+	800	2	Antisense	novelGene_ENSG00000268754.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGGCTCTTC	NA	False	NA	10	True	AATAAA	-22	NA	86278292	86281241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr16_+_86278682_86280830
transcript_55834.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000634347.1	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	10.1136400116731	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554749_86555168
transcript_55835.known	chr16	-	3028	8	FSM	ENSG00000103248.19	ENST00000360900.11	3028	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	8.92371296385224	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGCCTGCACACCTTTCAC	-86554562	True	NA	-9	True	AATAAA	-15	NA	86555235	86530185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552032_86552147_86554644_86554752_86555168
transcript_55836.known	chr16	-	1207	8	FSM	ENSG00000103248.19	ENST00000543303.6	1207	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.9447963778537	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554749_86555168
transcript_55837.known	chr16	-	1210	8	FSM	ENSG00000103248.19	ENST00000381214.9	1210	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	14.4518906326177	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCGTCCCCTGCCGCTCCG	-86554530	True	NA	NA	False	NA	NA	NA	86555203	86531971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86532482_86541696_86541823_86542100_86542214_86546558_86546650_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_55842.known	chr16	-	845	6	FSM	ENSG00000103248.19	ENST00000568037.5	845	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.61034021896	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGACCATGTCTTATG	-86554505	True	NA	-9	True	AATAAA	-15	NA	86555178	86547145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86547569_86548034_86548112_86548463_86548578_86552178_86552293_86554644_86554752_86555168
transcript_55845.known	chr16	-	581	3	FSM	ENSG00000103248.19	ENST00000565482.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAAAATGTGCCACCTC	-86554348	False	NA	NA	False	ACTAAA	-7	NA	86555021	86548487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_86548578_86552032_86552147_86554644
transcript_55846.known	chr16	+	1980	1	FSM	ENSG00000280278.1	ENST00000624773.1	1980	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTGAACCTTAACTCAAAT	86555303	True	NA	NA	False	AATAAA	-21	NA	86555319	86557299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_86555300_86557300
transcript_55852.known	chr16	-	974	5	FSM	ENSG00000260456.7	ENST00000618367.4	974	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	17.8675683852056	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGATGACCTCTGATTTC	-87316759	True	NA	12	True	AATAAA	-35	NA	87317420	87302800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87303076_87305718_87305906_87314970_87315097_87315771_87315824_87317086
transcript_55854.known	chr16	-	525	3	FSM	ENSG00000260456.7	ENST00000565212.5	525	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	24.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	NA	False	NA	-1	True	AATAAA	-22	NA	87306125	87302813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87303076_87305718_87305906_87306049
transcript_55855.known	chr16	-	1113	7	FSM	ENSG00000260456.7	ENST00000567970.2	1113	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.6866805086908	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCACCTCTTAAATGAT	-87316731	True	NA	-1	True	AATAAA	-22	NA	87317392	87302813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87303076_87305718_87305906_87310296_87310334_87311149_87311297_87314970_87315097_87315771_87315824_87317090
transcript_55857.known	chr16	+	2147	4	FSM	ENSG00000140941.14	ENST00000268607.10	2147	4	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_3	7.58653778449403	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAAGCCCAGTTTAATGGG	87387102	True	NA	14	True	AATAAA	-21	NA	87392335	87404774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87392468_87398814_87398871_87402174_87402282_87402922
transcript_55859.known	chr16	+	401	2	FSM	ENSG00000270006.3	ENST00000602282.3	417	2	16	0	9	0	multi-exon	FALSE	canonical	2	7	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTATGTTCTTTAAGTTA	87317337	True	NA	9	True	AGTAAA	-22	NA	87317508	87318043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87317723_87317856
transcript_55862.nnic	chr16	+	886	2	NNC	ENSG00000140941.14	novel	3134	5	NA	NA	-85	-9186	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTACAACTAACGTCATT	NA	False	NA	NA	False	AATAAA	-25	NA	87383867	87390318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_87384197_87389761
transcript_55866.known	chr16	-	1924	12	FSM	ENSG00000104731.14	ENST00000270583.10	1924	12	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_7	23.5887632585118	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761771	True	NA	NA	False	AATAAA	-18	NA	87765986	87707811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_55869.known	chr16	-	1757	11	FSM	ENSG00000104731.14	ENST00000562155.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	53.8506267372999	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAAATAAATTGGACTTG	-87761714	True	NA	NA	False	NA	NA	NA	87765929	87707839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87761948_87762041_87765791
transcript_55871.known	chr16	-	1821	11	FSM	ENSG00000104731.14	ENST00000347925.9	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	43.952246814014	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761761	True	NA	NA	False	AATAAA	-18	NA	87765976	87707811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708076_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87748672_87748810_87755193_87755293_87756398_87756478_87761948_87762041_87765791
transcript_55874.known	chr16	-	1663	10	FSM	ENSG00000104731.14	ENST00000353170.9	1663	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	56.239566933689	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCGCGGAGGGTGTCTTC	-87761684	True	NA	NA	False	AATAAA	-18	NA	87765899	87707811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87708073_87708349_87708467_87709264_87709668_87711234_87711444_87714497_87714574_87726764_87726925_87730551_87730645_87748672_87748810_87755193_87755293_87765791
transcript_5588.known	chr1	-	2842	10	FSM	ENSG00000132128.18	ENST00000615587.4	2842	10	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_7	35.7556867617232	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGCAGCCCTTCTTGATG	-46298194	True	NA	-26	True	AATAAA	-14	NA	46303263	46278402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46279085_46279181_46279258_46279491_46279615_46280191_46280291_46280395_46280561_46281124_46281386_46285361_46286500_46297562_46297634_46298283_46298371_46303123
transcript_55883.known	chr16	+	1030	2	FSM	ENSG00000154118.13	ENST00000301008.5	1030	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACGTGTGCTCTAGTCCTCCC	87602738	True	NA	3	True	AATAAA	-13	NA	87602886	87604627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87603529_87604239
transcript_55884.nnic	chr16	-	757	2	Genic_Genomic	ENSG00000269935.1	novel	1665	1	NA	NA	3	1	multi-exon	FALSE	canonical	2	5	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTACTTTTCATTTCTT	-87602142	True	NA	NA	False	AATAAA	-18	NA	87602187	87600524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr16_-_87601106_87602011
transcript_55885.known	chr16	-	445	2	FSM	ENSG00000104731.14	ENST00000568499.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCAGAATTTCTTTTTAATC	-87708359	True	NA	NA	False	ACTAAA	-4	NA	87708387	87703025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_87703433_87708349
transcript_55886.known	chr16	+	2398	14	FSM	ENSG00000172530.21	ENST00000682872.1	2398	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_9	37.0892095825136	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87949501	True	NA	15	True	AATAAA	-16	NA	87951433	88077316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_55887.nic	chr16	+	2356	13	NIC	ENSG00000172530.21	novel	2398	14	NA	NA	-22	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_9	33.0374366775363	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGCCTTACGCTTTTCC	87951398	True	NA	15	True	AATAAA	-16	NA	87951409	88077316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88004294_88004412_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_55889.known	chr16	+	2283	13	FSM	ENSG00000172530.21	ENST00000393208.6	2283	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	40.2468080169789	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	87949501	True	NA	17	True	AATAAA	-18	NA	87951433	88077318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88065266_88065333_88072068_88072213_88076589
transcript_55891.known	chr16	+	2164	12	FSM	ENSG00000172530.21	ENST00000355022.8	2164	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	36.6757063737909	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTTACGCTTTTCCTC	87949554	True	NA	17	True	AATAAA	-18	NA	87951486	88077318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035322_88035395_88037972_88038012_88072068_88072213_88076589
transcript_55892.known	chr16	+	1551	12	FSM	ENSG00000172530.21	ENST00000479780.6	1551	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	25.5057925684628	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGTGCCCATGGCACCAGG	87949501	True	NA	NA	False	NA	NA	NA	87951433	88076661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87951516_87975047_87975186_87981035_87981128_87984059_87984260_88006089_88006266_88018427_88018668_88027482_88027651_88033108_88033246_88035331_88035395_88037972_88038012_88072068_88072213_88076589
transcript_55897.nic	chr16	+	704	2	ISM	ENSG00000172530.21	ENST00000412691.5	586	5	-65	31503	-52	0	5prime_fragment	FALSE	canonical	1	8	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCTGTCATCATT	87951362	False	NA	12	True	ATTAAA	-21	NA	87951379	87952748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_87951516_87952180
transcript_55898.known	chr16	+	502	1	FSM	ENSG00000172530.21	ENST00000612301.1	502	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGATTCTGTCATCATT	87952217	False	NA	12	True	ATTAAA	-21	NA	87952246	87952748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_87952200_87952700
transcript_55899.known	chr16	+	498	3	FSM	ENSG00000260420.3	ENST00000569362.2	498	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGCGTGAATTTTTACA	NA	False	NA	NA	False	AATAAA	-27	NA	88194280	88195217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88194512_88194749_88194866_88195066
transcript_55900.known	chr16	+	3705	18	FSM	ENSG00000158545.16	ENST00000301011.10	3705	18	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_7	34.2680255902594	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTCCTTGCCCTCGTGGT	88564942	True	NA	15	True	AATAAA	-16	NA	88570402	88631964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_55906.nic	chr16	+	760	2	ISM	ENSG00000158545.16	ENST00000569435.5	694	6	-92	22114	-17	-22114	5prime_fragment	FALSE	canonical	3	201	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGACGATGATGGAGAAATC	88564925	True	NA	NA	False	AAAAAG	-5	NA	88570385	88577688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_88570567_88577109
transcript_55907.known	chr16	+	3211	19	FSM	ENSG00000158545.16	ENST00000452588.6	3211	19	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	66.9880217779895	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGTAAAAAAGAAAAAA	88564942	True	NA	NA	False	NA	NA	NA	88570402	88631398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88570567_88577109_88577727_88586599_88586685_88587541_88587614_88598177_88598327_88598619_88598713_88599790_88599949_88608933_88609052_88611267_88611537_88622196_88622389_88623218_88623345_88623957_88624063_88624601_88624746_88625201_88625268_88627621_88627783_88627919_88628120_88628757_88628855_88630484_88630582_88631100
transcript_55909.known	chr16	+	1060	3	FSM	ENSG00000124391.5	ENST00000244241.5	1060	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCCAGAGGCCAACATTCA	88638507	True	NA	13	True	ATTAAA	-13	NA	88638571	88640468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88638648_88638980_88639310_88639813
transcript_5591.nnic	chr1	-	752	4	NNC	ENSG00000132128.18	novel	3389	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	228.958996814325	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-46303336	False	NA	3	True	AATAAA	-22	NA	46303389	46296741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_46297070_46297562_46297634_46298283_46298371_46303123
transcript_55910.known	chr16	-	692	6	FSM	ENSG00000051523.11	ENST00000261623.8	692	6	0	0	0	0	multi-exon	FALSE	canonical	3	2428	junction_1	101.39625239623	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGTGAGCCTCTGCCTGG	-88638469	True	NA	-7	True	AATAAA	-17	NA	88651053	88643288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88643572_88646115_88646198_88646754_88646839_88647100_88647176_88648044_88648115_88650955
transcript_55911.known	chr16	-	1052	4	FSM	ENSG00000051523.11	ENST00000563526.5	1052	4	0	0	0	0	multi-exon	FALSE	canonical	3	2459	junction_1	97.0188985026457	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGGACGCAGCGGTTGCTG	-88650959	False	NA	NA	False	NA	NA	NA	88650988	88645964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88646839_88647100_88647176_88648044_88648115_88650955
transcript_55922.known	chr16	-	217	2	FSM	ENSG00000167508.12	ENST00000562741.1	217	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACAGGTTTTTGTGTGA	-88655136	True	NA	-8	True	AATAAA	-17	NA	88663161	88662101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88662168_88663010
transcript_55923.known	chr16	-	1799	10	FSM	ENSG00000167508.12	ENST00000301012.8	1799	10	0	0	0	0	multi-exon	TRUE	canonical	3	565	junction_4	59.4090237149663	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGCCTCCGCCGTTTTTC	-88655066	True	NA	-9	True	AATAAA	-15	NA	88663091	88651939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88652606_88653299_88653409_88654691_88654808_88655198_88655418_88655655_88655731_88656104_88656305_88657435_88657583_88657914_88658030_88658649_88658721_88663010
transcript_55924.known	chr16	+	1828	5	FSM	ENSG00000260630.8	ENST00000654033.1	1828	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.87082869338697	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCCCTCACAGCCTCTGAA	88662866	True	NA	NA	False	AAGAAA	-14	NA	88663338	88676165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603_88673760_88675054
transcript_55926.known	chr16	+	2446	4	FSM	ENSG00000260630.8	ENST00000669434.1	2446	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGATCAGCTGTCCCCCAT	88662862	True	NA	6	True	AGTAAA	-11	NA	88663334	88675484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88673603
transcript_55927.known	chr16	+	1090	4	FSM	ENSG00000260630.8	ENST00000563261.7	1094	4	0	4	0	-4	multi-exon	TRUE	canonical	0	0	junction_3	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCCAGTGTCTGGGTCT	NA	False	NA	109	True	CATAAA	-15	NA	88663297	88687278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812_88672123_88686790
transcript_55928.known	chr16	+	588	3	FSM	ENSG00000260630.8	ENST00000569786.6	1136	3	46	502	0	-502	multi-exon	FALSE	canonical	1	4	junction_2	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTGTGATTGTTTTCTGGT	88662896	True	NA	NA	False	NA	NA	NA	88663368	88672179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88663401_88671276_88671466_88671812
transcript_55931.known	chr16	-	1740	3	FSM	ENSG00000185669.6	ENST00000332281.6	1740	3	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_2	1.5	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCATGTTCCGTTCTTCG	-88685534	True	NA	-11	True	AATAAA	-14	NA	88686507	88677687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88678630_88681093_88681715_88686330
transcript_55933.known	chr16	-	1864	6	FSM	ENSG00000158717.11	ENST00000312838.9	1864	6	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	23.5847408296127	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTAGCAGCCTCGACTGG	-88704102	True	NA	-11	True	AATAAA	-14	NA	88706408	88696500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88697634_88698501_88698610_88698970_88699086_88699619_88699733_88701261_88701419_88706170
transcript_55935.known	chr16	+	1905	15	FSM	ENSG00000174177.13	ENST00000567949.5	1905	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	58.5902408813158	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	88703506	True	NA	6	True	AATAAA	-24	NA	88706521	88715386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712060_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_55937.known	chr16	+	1721	15	FSM	ENSG00000174177.13	ENST00000453996.7	1721	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	24.2953762292838	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTGGGGGACGGCAGCGC	88703487	True	NA	16	True	AATAAA	-34	NA	88706502	88715396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_5594.nic	chr1	-	1167	3	ISM	ENSG00000132128.18	ENST00000498402.2	2068	5	-37	12575	-37	0	5prime_fragment	FALSE	canonical	3	478	junction_1	15	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTCTGTGTAACTCCTT	-46298242	True	NA	3	True	AATAAA	-22	NA	46303311	46296741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46297634_46298283_46298371_46303123
transcript_55940.known	chr16	+	1672	14	FSM	ENSG00000174177.13	ENST00000312060.9	1672	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_13	60.5553197131526	1097	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTACAGTACACGTGGGGG	88703467	True	NA	6	True	AATAAA	-24	NA	88706482	88715386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88709937_88710017_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715181
transcript_55944.known	chr16	+	1586	14	FSM	ENSG00000174177.13	ENST00000564105.5	1586	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	59.3995596979278	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACGGGGGACTGGCCTCT	88703467	True	NA	-60	True	NA	NA	NA	88706482	88715320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88706599_88707135_88707211_88710222_88710283_88711634_88711696_88712273_88712384_88712621_88712906_88713311_88713448_88713646_88713779_88714135_88714228_88714382_88714487_88714586_88714738_88714859_88714927_88715047_88715107_88715181
transcript_5595.known	chr1	+	2577	19	FSM	ENSG00000085999.13	ENST00000671528.1	2577	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.7780966954817	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGAGCAGTGTGGTAAGCC	46242842	True	NA	29	True	AATAAA	-22	NA	46247699	46278480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46247747_46248317_46248409_46248511_46248599_46249999_46250120_46258685_46258747_46259963_46260100_46260541_46260612_46260726_46261016_46261260_46261386_46267458_46267610_46270658_46270786_46272465_46272541_46272671_46272803_46273354_46273466_46273623_46273748_46274137_46274217_46274537_46274718_46277816_46277981_46278071
transcript_55960.known	chr16	-	663	5	FSM	ENSG00000103335.22	ENST00000472168.1	663	5	0	0	0	0	multi-exon	TRUE	canonical	3	152	junction_1	5.35607132140714	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGTTCGTGCGCGGATTCT	NA	False	NA	NA	False	GGGGCT	-28	NA	88716792	88715815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88715855_88715932_88716120_88716197_88716278_88716360_88716484_88716558
transcript_55980.known	chr16	-	664	5	FSM	ENSG00000198931.11	ENST00000426324.6	664	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2364.25611979751	3336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783152	True	NA	-4	True	AGTAAA	-15	NA	88811925	88809468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809707_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_55981.known	chr16	-	667	4	FSM	ENSG00000198931.11	ENST00000567391.5	667	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2321.37473637211	2169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783155	True	NA	-4	True	AGTAAA	-15	NA	88811928	88809468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809841_88810069_88810149_88811549_88811657_88811819
transcript_55982.known	chr16	-	542	4	FSM	ENSG00000198931.11	ENST00000568319.5	542	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2195.91863844421	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88783164	True	NA	-4	True	AGTAAA	-15	NA	88811937	88809468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809707_88810069_88810149_88811549_88811657_88811819
transcript_55983.known	chr16	-	709	4	FSM	ENSG00000198931.11	ENST00000563655.5	709	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2321.37473637211	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAAGAGCCGTCTCCTGTCCT	-88783147	True	NA	-7	True	AGTAAA	-12	NA	88811920	88809471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809841_88810069_88810149_88811496_88811657_88811819
transcript_55984.known	chr16	-	437	2	FSM	ENSG00000198931.11	ENST00000567057.5	437	2	0	0	0	0	multi-exon	FALSE	canonical	3	1712	junction_1	0	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCGTCTCCTGTCCTCCT	-88810257	False	NA	-4	True	AGTAAA	-15	NA	88810268	88809468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809707_88810069
transcript_55985.known	chr16	-	788	5	FSM	ENSG00000198931.11	ENST00000569616.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2711.32655493579	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACCCAATTACACACAGCG	-88783124	True	NA	-53	True	GGGGCT	-44	NA	88811897	88809517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88809908_88810069_88810149_88810422_88810557_88811549_88811657_88811819
transcript_55986.known	chr16	+	1060	6	FSM	ENSG00000167515.10	ENST00000564365.5	1060	6	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	401.818566022029	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGGCCCTCCTCTTTCTGGA	88856143	True	NA	NA	False	NA	NA	NA	88856219	88861415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88856247_88858618_88858790_88859344_88859444_88859572_88859751_88859892_88859973_88860910
transcript_55993.known	chr16	+	854	5	FSM	ENSG00000167515.10	ENST00000567895.5	854	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	429.079465250902	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCCCAGAACCAGCCTA	88846094	True	NA	NA	False	NA	NA	NA	88857085	88861351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858641_88858792_88859662_88859751_88859892_88859973_88860913
transcript_55997.known	chr16	-	2344	14	FSM	ENSG00000141012.13	ENST00000268695.10	2344	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	13.706561293235	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTTGGCTGAGTGA	-88854945	True	NA	-19	True	AATAAA	-34	NA	88856947	88813733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_88814526_88818006_88818125_88822588_88822711_88824766_88824870_88826701_88826839_88831997_88832102_88835212_88835353_88835724_88835850_88836200_88836268_88837621_88837766_88840991_88841095_88841896_88841972_88842705_88842830_88856757
transcript_55998.known	chr16	+	2215	5	FSM	ENSG00000167515.10	ENST00000301021.7	2215	5	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	305.427057576764	3780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGGTTTTCTGTTAGG	88846094	True	NA	28	True	AATAAA	-29	NA	88857085	88862686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618_88858792_88859662_88859751_88859892_88859973_88860910
transcript_55999.known	chr16	+	499	4	FSM	ENSG00000167515.10	ENST00000567312.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	397.02141000203	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTTGGCTTTTTCCTTCCG	88846143	True	NA	16	True	ACTAAA	-16	NA	88857134	88861112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618_88858790_88859892_88859973_88860913
transcript_56000.known	chr16	+	915	5	FSM	ENSG00000167515.10	ENST00000564404.5	915	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	481.254805170816	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGATTTGGCTTTTTCCTTC	88846152	True	NA	14	True	ACTAAA	-14	NA	88857143	88861110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_88857184_88858618_88858790_88859344_88859751_88859892_88859973_88860892
transcript_56002.known	chr16	+	4095	11	FSM	ENSG00000176715.17	ENST00000614302.5	4095	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	38.2575482748176	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTCTGGTGCTGAC	89092427	True	NA	NA	False	ATTAAA	-18	NA	89093851	89156233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89093997_89098590_89098764_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_56004.known	chr16	+	2247	10	FSM	ENSG00000176715.17	ENST00000406948.7	2247	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.5816434315147	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGTCCCACGCCGTCTG	89092458	True	NA	9	True	AAAACA	-24	NA	89093882	89154589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89093997_89100661_89101348_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_56006.known	chr16	+	1541	9	FSM	ENSG00000176715.17	ENST00000378345.8	1541	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	40.6199996922698	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCTGTCCCACGCCGTCT	89092473	True	NA	8	True	AAAACA	-23	NA	89093897	89154588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89093993_89102603_89102760_89112091_89112247_89114338_89114488_89120800_89120914_89133135_89133263_89145266_89145402_89145937_89146050_89154089
transcript_56014.nic	chr16	+	1190	3	ISM	ENSG00000129910.8	ENST00000289746.3	2866	14	21459	0	21440	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACGGGCGCCCACTGCCAC	NA	False	NA	NA	False	AATGAA	-25	NA	89193206	89195492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89193607_89193754_89193914_89194861
transcript_56015.known	chr16	-	2443	1	FSM	ENSG00000259877.2	ENST00000570267.2	2443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTGAGTTATAGGAGTTC	-89217456	True	NA	-6	True	ATTAAA	-16	NA	89217653	89215210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89215200_89217700
transcript_56016.known	chr16	+	267	2	FSM	ENSG00000170100.14	ENST00000565877.5	267	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTAGCTTTGGGCCATG	89216258	True	NA	-54	True	NA	NA	NA	89217709	89218307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89217911_89218241
transcript_56021.known	chr16	+	1632	2	FSM	ENSG00000197912.16	ENST00000568509.3	1632	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAAATCCTTAACAGTACT	89490898	True	NA	14	True	AATAAA	-18	NA	89490954	89499285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89491387_89498085
transcript_56022.known	chr16	+	3076	17	FSM	ENSG00000197912.16	ENST00000645818.2	3076	17	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_9	60.7890499493947	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGCATTGTCTGGCCAG	89498367	True	NA	29	True	AATAAA	-21	NA	89508402	89557766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89508601_89510489_89510593_89512947_89513038_89524005_89524248_89526328_89526469_89529476_89529580_89530682_89530809_89531903_89532067_89532462_89532637_89544647_89544773_89546657_89546761_89548002_89548114_89550493_89550610_89552978_89553136_89553793_89553961_89554485_89554564_89556886
transcript_56025.known	chr16	+	554	5	FSM	ENSG00000167526.14	ENST00000563270.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	1	262	junction_1	8220.8617971293	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAATAAAGCCCTCCTG	89328905	True	NA	-32	True	AAAAAG	-34	NA	89560680	89563032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_56027.known	chr16	+	2187	6	FSM	ENSG00000167526.14	ENST00000311528.10	2187	6	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	3823.70488400975	28908	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACACGCCTGTAATCCCAGC	89328906	True	NA	30	True	AATACA	-20	NA	89560681	89564542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561369_89561577_89561752_89562334_89562392_89562883
transcript_56028.known	chr16	+	958	5	FSM	ENSG00000167526.14	ENST00000562879.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7851.75144076148	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGGCAGAGGTGAGGGATC	89328906	True	NA	47	True	AAGAAA	-43	NA	89560681	89563473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561064_89561595_89561752_89562334_89562392_89562883
transcript_56029.known	chr16	+	924	5	FSM	ENSG00000167526.14	ENST00000484610.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	3985.08302924795	853	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCAGTCATGCTGGGTCT	89328903	True	NA	3	True	AATAAA	-25	NA	89560678	89563067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561064_89561226_89561752_89562334_89562392_89562883
transcript_56030.known	chr16	+	698	4	FSM	ENSG00000167526.14	ENST00000491523.5	698	4	0	0	0	0	multi-exon	FALSE	canonical	3	9495	junction_1	4805.48140726354	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTGAACACTTACTCAAAT	89328901	True	NA	NA	False	NA	NA	NA	89560676	89562393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89560713_89560939_89561369_89561577_89561752_89562334
transcript_56031.known	chr16	+	435	2	FSM	ENSG00000167526.14	ENST00000570149.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	18211	junction_1	0	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGGCAGTCATGCTGGGTC	89562074	False	NA	2	True	AATAAA	-24	NA	89562139	89563066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89562392_89562883
transcript_56032.known	chr16	+	631	2	FSM	ENSG00000167526.14	ENST00000472354.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	0	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTGGTGCTGCACACTTG	89562227	True	NA	12	True	AATAAA	-12	NA	89562369	89563438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89562446_89562883
transcript_56033.known	chr16	+	2442	15	FSM	ENSG00000178773.15	ENST00000319518.13	2442	15	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_9	30.11339114963	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTTGTGCCTTCAGTC	89573466	True	NA	14	True	AATAAA	-20	NA	89575757	89597246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89576072_89577538_89577722_89583696_89583772_89584027_89584103_89584773_89584858_89585463_89585554_89585686_89585786_89586669_89586757_89587042_89587103_89588674_89588809_89589896_89589952_89591006_89591059_89591126_89591261_89595366_89595604_89596483
transcript_56037.nic	chr16	+	1709	11	FSM	ENSG00000015413.10	ENST00000690203.1	1631	11	-81	3	12	0	multi-exon	FALSE	canonical	3	82	junction_6	13.9143810498347	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	89611967	True	NA	12	True	AATAAA	-15	NA	89613560	89638430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_56041.nnic	chr16	+	1650	11	NNC	ENSG00000015413.10	novel	1592	10	NA	NA	217	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	31.7483857857372	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	89613872	False	NA	12	True	AATAAA	-15	NA	89613889	89638430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_89613990_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_56045.nic	chr16	+	1436	10	NIC	ENSG00000015413.10	novel	1631	11	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_1	34.0014524018033	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATCCTGGGGTACGTGTCA	89612030	True	NA	12	True	AATAAA	-15	NA	89613623	89638430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89613720_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_56048.known	chr16	+	1772	9	FSM	ENSG00000015413.10	ENST00000564281.5	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	14.6538177619349	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTAGGCCCGCAATAAAAG	89612079	True	NA	-20	True	NA	NA	NA	89613672	89638398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89613720_89630304_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637972_89638051
transcript_56051.known	chr16	+	1592	10	FSM	ENSG00000015413.10	ENST00000261615.5	1592	10	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_5	14.5296631451356	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGCTCAGGAGGTGGGGT	NA	False	NA	38	True	AATAAA	-41	NA	89630288	89638456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89630515_89635907_89636041_89636263_89636397_89636532_89636684_89636865_89636936_89637203_89637381_89637467_89637553_89637631_89637708_89637835_89637972_89638051
transcript_56052.known	chr16	-	2429	8	FSM	ENSG00000131165.16	ENST00000675161.1	2429	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	197.576025150537	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89650031	True	NA	-7	True	AATAAA	-19	NA	89657708	89644434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647034_89647122_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_56055.known	chr16	-	2342	7	FSM	ENSG00000131165.16	ENST00000397901.8	2342	7	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_4	20.169421299471	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89650031	True	NA	-7	True	AATAAA	-19	NA	89657708	89644434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_56056.known	chr16	-	2412	7	FSM	ENSG00000131165.16	ENST00000674799.1	2412	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	161.7615700825	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCTAGAATGCTGTTGTA	-89650048	True	NA	-51	True	NA	NA	NA	89657725	89644478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89653903_89654021_89657581
transcript_56057.known	chr16	-	803	7	FSM	ENSG00000131165.16	ENST00000550102.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_3	158.788818526019	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGGGTCTGTGTCCTGG	-89649973	True	NA	NA	False	NA	NA	NA	89657650	89645888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649377_89649498_89651568_89651647_89653903_89653924_89657581
transcript_56058.known	chr16	-	2550	6	FSM	ENSG00000131165.16	ENST00000675909.1	2550	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	156.236999459155	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCACAGTACATGGTCTC	NA	False	NA	NA	False	TTTAAA	-13	NA	89657738	89644236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89646715_89647202_89647332_89649350_89649498_89651568_89651647_89657581
transcript_56059.known	chr16	-	2797	6	FSM	ENSG00000131165.16	ENST00000551981.6	2797	6	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_3	22.068982758614	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCAAGCTTTGCTTTG	-89649998	True	NA	-7	True	AATAAA	-19	NA	89657675	89644434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89646088_89646526_89647332_89649350_89649498_89651568_89651647_89653903_89653924_89657581
transcript_56066.known	chr16	+	2190	3	FSM	ENSG00000167523.15	ENST00000301031.8	2190	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	24.5	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAGAAAAAAAAAAAAAGC	89656682	True	NA	NA	False	NA	NA	NA	89657801	89671267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89657836_89658247_89658422_89669285
transcript_56068.nic	chr16	+	1268	3	NIC	ENSG00000167523.15	novel	1264	2	NA	NA	-3	0	intron_retention	FALSE	canonical	2	9	junction_2	17.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	89656679	True	NA	-1	True	NA	NA	NA	89657798	89661483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89657949_89658247_89658422_89660539
transcript_56070.known	chr16	+	1297	3	FSM	ENSG00000167523.15	ENST00000457689.3	1297	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	17.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCGCCCCACCCTGTGAG	89656718	True	NA	NA	False	NA	NA	NA	89657837	89670297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89657949_89658247_89658422_89669285
transcript_56072.known	chr16	+	647	3	FSM	ENSG00000167523.15	ENST00000566204.2	647	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	37	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAACTGCAGCCCCCTTCTC	NA	False	NA	NA	False	NA	NA	NA	89657739	89669631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89657867_89658247_89658422_89669285
transcript_56076.known	chr16	+	2368	2	FSM	ENSG00000167523.15	ENST00000565890.1	2368	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGCTGAAA	89656709	True	NA	NA	False	NA	NA	NA	89657828	89671272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89658210_89669285
transcript_56078.known	chr16	+	1546	2	FSM	ENSG00000167523.15	ENST00000611218.1	1546	2	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGCTGGCTCTGCAGAG	89657701	True	NA	8	True	AATAAA	-19	NA	89658046	89670456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89658422_89669285
transcript_56079.known	chr16	+	1264	2	FSM	ENSG00000167523.15	ENST00000568929.1	1264	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACCTTCTTCCTGTGTA	89658090	False	NA	-1	True	NA	NA	NA	89658101	89661483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89658422_89660539
transcript_5608.known	chr1	+	674	5	FSM	ENSG00000173660.12	ENST00000496387.5	674	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	3267.92895998368	7478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204112	True	NA	18	True	AATAAA	-19	NA	46303708	46316776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46303821_46309100_46309128_46309896_46310045_46310154_46310317_46316551
transcript_56086.known	chr16	+	1767	13	FSM	ENSG00000185324.22	ENST00000353379.12	1767	13	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	83.2214248589602	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681626	True	NA	35	True	GATAAA	-16	NA	89686688	89696354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_5609.known	chr1	+	553	4	FSM	ENSG00000173660.12	ENST00000489056.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3178.42564102978	4164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCCGTCTTTTTTTTTT	46204101	True	NA	18	True	AATAAA	-19	NA	46303697	46316776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46303821_46309100_46309144_46310154_46310317_46316551
transcript_5610.known	chr1	+	687	2	FSM	ENSG00000173660.12	ENST00000486951.1	687	2	0	0	0	0	multi-exon	FALSE	canonical	3	5759	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAGAACTC	46204110	True	NA	NA	False	NA	NA	NA	46303706	46309673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46303821_46309100
transcript_56104.nic	chr16	+	1861	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-4	0	intron_retention	FALSE	canonical	3	193	junction_1	78.6029881878934	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	NA	False	NA	35	True	GATAAA	-16	NA	89686665	89696354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_56105.known	chr16	+	1703	12	FSM	ENSG00000185324.22	ENST00000505733.5	1703	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_11	128.964662979906	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681627	True	NA	35	True	GATAAA	-16	NA	89686689	89696354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695728
transcript_56109.known	chr16	+	1376	12	FSM	ENSG00000185324.22	ENST00000510811.6	1376	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	119.924287409781	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGTGGTGGACGCTGGC	89681628	True	NA	NA	False	NA	NA	NA	89686690	89696038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_56116.nnic	chr16	+	1677	12	NIC	ENSG00000185324.22	novel	1767	13	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	124.62698061624	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681605	True	NA	35	True	GATAAA	-16	NA	89686667	89696354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89686760_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89693327_89693397_89693468_89694172_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_56127.known	chr16	+	2532	11	FSM	ENSG00000185324.22	ENST00000472018.5	2532	11	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	82.4024271487194	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTTTCACCAGCGTTTA	89681637	True	NA	35	True	GATAAA	-16	NA	89686699	89696354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89686798_89689251_89689325_89690552_89690625_89691442_89691546_89691805_89691888_89692448_89692517_89693273_89694233_89694664_89694789_89694930_89695071_89695292_89695346_89695594
transcript_5613.known	chr1	+	4347	6	FSM	ENSG00000117481.11	ENST00000474844.6	4347	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	4.62168800331654	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTCTGTGAAGCCTGGA	46339945	True	NA	12	True	AATAAA	-14	NA	46340806	46365018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46340920_46344800_46345145_46346920_46347076_46352867_46353029_46360703_46360829_46361569
transcript_56145.nnic	chr16	+	1450	4	NNC	ENSG00000261373.1	novel	1753	4	NA	NA	-12	-7	intron_retention	TRUE	canonical	0	0	junction_3	33.2966464777861	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTTGCTATTCCTCTCCT	89709511	True	NA	NA	False	NA	NA	NA	89711843	89718157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_89712223_89712688_89712819_89716470_89716598_89717343
transcript_56146.nic	chr16	+	1497	4	NIC	ENSG00000261373.1	novel	1753	4	NA	NA	-12	0	intron_retention	FALSE	canonical	2	14	junction_3	26.7124606795322	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTCCTCTCCTTGCCAGT	89709511	True	NA	NA	False	NA	NA	NA	89711843	89718164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89712223_89712688_89712819_89716470_89716638_89717343
transcript_56147.known	chr16	+	1753	4	FSM	ENSG00000261373.1	ENST00000562866.1	1753	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.2966464777861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTCCTCTCCTTGCCAGTT	89709523	True	NA	NA	False	NA	NA	NA	89711855	89718165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89712223_89712688_89712819_89716470_89716905_89717343
transcript_56148.nnic	chr16	+	728	3	NNC	ENSG00000261373.1	novel	1753	4	NA	NA	-12	-4505	intron_retention	FALSE	canonical	0	0	junction_2	36.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGAGGCTGTATGACTTCG	89709511	True	NA	NA	False	NA	NA	NA	89711843	89713659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr16_+_89712223_89712688_89712819_89713440
transcript_56149.nic	chr16	+	2199	3	ISM	ENSG00000261373.1	ENST00000562866.1	1753	4	-12	5	-12	-4	intron_retention	FALSE	canonical	3	68	junction_2	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTATTCCTCTCCTTGC	89709511	True	NA	NA	False	NA	NA	NA	89711843	89718160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89712223_89712688_89712819_89716470
transcript_56153.known	chr16	-	1694	10	FSM	ENSG00000187741.15	ENST00000563673.5	1694	10	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	23.5801758127039	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAATAAAGCACTGTGT	-89811706	True	NA	-29	True	ATTAAA	-32	NA	89816635	89798384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89799233_89799604_89799639_89803258_89803342_89805279_89805393_89808293_89808368_89810706_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_56154.known	chr16	-	650	5	FSM	ENSG00000187741.15	ENST00000567883.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	12.5099960031968	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGTTTAGAAATCATCTGT	-89811679	True	NA	NA	False	NA	NA	NA	89816608	89810571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89810803_89810928_89811072_89814519_89814614_89815876_89815987_89816536
transcript_56158.known	chr16	+	2248	18	FSM	ENSG00000141002.20	ENST00000263346.13	2248	18	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_7	36.6927766950349	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	89863942	True	NA	30	True	TATAAA	-14	NA	89873591	89911379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89910590_89910664_89911079
transcript_5617.known	chr1	+	4344	5	FSM	ENSG00000117481.11	ENST00000307089.7	4344	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	27.6981497577004	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTTGTGAGTATTAATG	46339927	True	NA	NA	False	NA	NA	NA	46340788	46365152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46340920_46344800_46345145_46352867_46353029_46360703_46360829_46361569
transcript_56181.nic	chr16	+	539	3	ISM	ENSG00000141002.20	ENST00000614813.4	2047	6	-126	6020	-55	0	5prime_fragment	FALSE	canonical	3	341	junction_1	16.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAACAGAAAAACAAGA	NA	False	NA	28	True	NA	NA	NA	89873514	89884613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89873860_89883350_89883513_89884581
transcript_56182.known	chr16	+	2111	1	FSM	ENSG00000258839.4	ENST00000555147.2	2111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTAGCCCCTTCCAGAAAG	89918845	True	NA	6	True	AATAAA	-20	NA	89918861	89920972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89918900_89921000
transcript_56183.known	chr16	+	2377	19	FSM	ENSG00000141002.20	ENST00000263347.11	2377	19	0	0	0	0	multi-exon	TRUE	canonical	2	27	junction_17	93.9633498291281	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCGTCCGCACCTTCTCCT	89863936	True	NA	35	True	TATAAA	-19	NA	89873585	89911384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89873860_89883350_89883513_89884581_89884657_89885847_89885967_89887651_89887718_89892192_89892276_89893727_89893859_89895037_89895138_89895989_89896084_89898556_89898650_89898766_89898873_89900634_89900795_89904117_89904206_89904937_89905097_89906193_89906285_89907242_89907323_89908965_89909084_89910590_89910664_89911079
transcript_56184.known	chr16	+	515	3	FSM	ENSG00000141002.20	ENST00000566283.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	150	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTCTGCCGTCCGCACCTT	NA	False	NA	30	True	TATAAA	-14	NA	89908965	89911379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89909108_89910590_89910664_89911079
transcript_56185.known	chr16	+	1706	4	FSM	ENSG00000258947.8	ENST00000315491.12	1706	4	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	25.3026129524645	1070	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGGTGCCAGAGATGTCC	89911148	True	NA	34	True	AATAAA	-23	NA	89923341	89936097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89923459_89932570_89932680_89933467_89933579_89934728
transcript_56186.known	chr16	+	477	3	FSM	ENSG00000141002.20	ENST00000565404.1	477	3	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATGAGTTTATTGGCTG	89883243	True	NA	NA	False	AATAAA	-23	NA	89883393	89886130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89883513_89884581_89884657_89885847
transcript_56192.nic	chr16	+	898	6	NIC	ENSG00000140995.17	novel	852	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	56	junction_1	195.206557266911	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942015	True	NA	NA	False	ATTAAA	-14	NA	89948745	89959366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89948815_89949419_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_56194.known	chr16	+	580	6	FSM	ENSG00000140995.17	ENST00000561741.5	580	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	247.618577655232	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGACAAGTGTAACACCAT	89942044	True	NA	NA	False	NA	NA	NA	89948774	89959097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949564_89949639_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_56197.known	chr16	+	816	5	FSM	ENSG00000140995.17	ENST00000610455.4	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	122.693469671372	1564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGTGTCTAGTTTGT	89942000	True	NA	NA	False	ATTAAA	-11	NA	89948730	89959363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_5620.nnic	chr1	+	1994	16	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-552	0	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_6	73.0866760923099	30	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393764	46413845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46405870_46405953_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_56205.known	chr16	+	535	2	FSM	ENSG00000140995.17	ENST00000562044.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTGTGTCTAGTTTGTAC	89958208	True	NA	NA	False	ATTAAA	-13	NA	89958350	89959365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89958534_89959013
transcript_56207.known	chr16	+	3620	13	FSM	ENSG00000140995.17	ENST00000563594.6	3620	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	164.586350183321	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGTGTGTGGTGA	89942024	True	NA	5	True	ATTAAA	-14	NA	89948754	89968060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013_89959156_89960930_89961096_89961736_89961865_89962011_89962126_89963362_89963444_89964169_89964311_89964465_89964576_89965860
transcript_56208.known	chr16	+	852	6	FSM	ENSG00000140995.17	ENST00000418391.6	852	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	189.022749953544	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTGTCTAGTTTGTACA	89942064	True	NA	NA	False	ATTAAA	-14	NA	89948794	89959366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_89948815_89949416_89949514_89954242_89954377_89955168_89955267_89957510_89957661_89959013
transcript_56209.known	chr16	-	2744	1	FSM	ENSG00000177946.7	ENST00000646748.1	2744	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTTTAAAAGCTCATATA	-89972166	True	NA	-17	True	ATTAAA	-17	NA	89972534	89969790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_89969800_89972500
transcript_56215.nic	chr16	+	844	6	ISM	ENSG00000223959.9	ENST00000557444.5	2447	17	-59	15967	-9	0	5prime_fragment	FALSE	canonical	3	27	junction_1	12.3223374405995	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	NA	False	NA	13	True	AGTAAA	-21	NA	89972571	89984701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89972766_89977638_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_56216.nic	chr16	+	786	6	ISM	ENSG00000223959.9	ENST00000436447.5	3003	10	-2	11922	2	0	5prime_fragment	FALSE	canonical	1	4	junction_1	19.7281524730523	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	89970677	True	NA	13	True	AGTAAA	-21	NA	89972590	89984701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89972766_89977677_89977803_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_56220.nic	chr16	+	775	5	ISM	ENSG00000223959.9	ENST00000690928.1	3059	10	-14	11919	-9	0	5prime_fragment	FALSE	canonical	3	10	junction_2	19.5320249846246	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	NA	False	NA	13	True	AGTAAA	-21	NA	89972571	89984701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89972766_89977638_89977803_89980241_89980337_89981772_89981924_89984530
transcript_56221.nic	chr16	+	675	5	ISM	ENSG00000223959.9	ENST00000429663.6	2799	9	-4	11915	-4	0	5prime_fragment	FALSE	canonical	2	3	junction_1	22.0269721024021	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	NA	False	NA	13	True	AGTAAA	-21	NA	89972576	89984701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_89972766_89978809_89978879_89980241_89980337_89981772_89981924_89984530
transcript_56225.nnic	chr16	+	602	4	NIC	ENSG00000223959.9	novel	2799	9	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	26.2424592343528	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTCGTTAATGTGTTT	89970667	True	NA	13	True	AGTAAA	-21	NA	89972580	89984701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_+_89972766_89980241_89980337_89981772_89981924_89984530
transcript_56228.known	chr16	+	1687	11	FSM	ENSG00000141013.17	ENST00000536122.7	1687	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.5746733949854	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCATCCTCTTTCCTGG	90018479	True	NA	18	True	AATGAA	-16	NA	90019642	90043472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_90019769_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_56229.known	chr16	+	3094	11	FSM	ENSG00000141013.17	ENST00000268699.9	3094	11	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	34.3920048848566	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTTTATAACCTGT	90022398	True	NA	16	True	TATAAA	-16	NA	90022679	90044960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_+_90022725_90027635_90027723_90031298_90031497_90032717_90032925_90035632_90035688_90036380_90036587_90037231_90037400_90037761_90037849_90040299_90040510_90042469_90042536_90043195
transcript_56234.known	chr16	-	1349	5	FSM	ENSG00000222019.7	ENST00000409873.5	1349	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.74165738677394	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCTACTTATTAATTGT	-90047490	False	135	NA	False	AGTAAA	-23	NA	90047625	90039760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90040418_90043647_90043990_90044501_90044624_90046956_90047097_90047537
transcript_56235.nic	chr16	-	1720	5	NIC	ENSG00000222019.7	novel	1349	5	NA	NA	-29	399	combination_of_known_junctions	TRUE	canonical	2	4	junction_4	2.58602010819715	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGCCTTGGTCTCTAAA	-90047667	True	NA	NA	False	AATAAA	-33	NA	90047802	90039361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr16_-_90040418_90043647_90043990_90044501_90044624_90046956_90047097_90047742
transcript_56236.known	chr16	-	2056	4	FSM	ENSG00000003249.15	ENST00000002501.11	2056	4	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	36.9864840178139	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-90014581	True	NA	-7	True	ATTAAA	-20	NA	90019456	90004870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019310
transcript_56237.known	chr16	-	2073	4	FSM	ENSG00000003249.15	ENST00000568838.2	2073	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	332.129827360058	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTGGCCACAGTCTCTTC	-90019099	True	NA	-7	True	ATTAAA	-20	NA	90019890	90004870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90006493_90008783_90008925_90009283_90009431_90019727
transcript_56238.known	chr16	-	398	4	FSM	ENSG00000222019.7	ENST00000610227.1	398	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.39934634239519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCGAAGACTGGCAGCGGGA	-90047462	False	NA	NA	False	NA	NA	NA	90047597	90043913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047537
transcript_56239.known	chr16	-	1381	4	FSM	ENSG00000222019.7	ENST00000517889.5	1381	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	2.05480466765633	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGTTTCCCACTCAGGTT	-90047638	True	NA	NA	False	NA	NA	NA	90047773	90042901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr16_-_90043990_90044501_90044624_90046956_90047097_90047742
transcript_5624.nnic	chr1	+	1912	15	NNC	ENSG00000117480.16	novel	1046	8	NA	NA	-552	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	49.8076401810823	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCCTCGTCTGTGTGGTTT	NA	False	NA	NA	False	AAGAAA	-3	NA	46393764	46413845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46393862_46402090_46402205_46405013_46405149_46405371_46405506_46405587_46405795_46406037_46406079_46406243_46406369_46408458_46408585_46409100_46409199_46410397_46410498_46410813_46410855_46411611_46411652_46412142_46412252_46413074_46413221_46413446
transcript_56241.nic	chr16	+	386	2	ISM	ENSG00000141013.17	ENST00000565957.5	549	4	26	11083	20	-7673	5prime_fragment	FALSE	canonical	2	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAGAAAAGAAAAAGTCTA	90018499	True	NA	NA	False	AAAAAG	-6	NA	90019662	90020323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr16_+_90019769_90020043
transcript_56246.known	chr17	-	880	2	FSM	ENSG00000181031.16	ENST00000572965.1	880	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGCCCAGGACCGTGGG	NA	False	NA	NA	False	NA	NA	NA	215933	213323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_213924_215653
transcript_56247.known	chr17	+	411	2	FSM	ENSG00000262920.5	ENST00000570501.5	411	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACAGGTCTAAGGCGTTT	NA	False	NA	NA	False	NA	NA	NA	321391	322453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_321611_322261
transcript_56249.known	chr17	+	1841	2	FSM	ENSG00000187624.9	ENST00000360127.7	1841	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTCCATTATAAAAAGCCT	410044	True	NA	NA	False	CATAAA	-17	NA	410324	414666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_410647_413147
transcript_56252.known	chr17	-	2149	18	FSM	ENSG00000141252.21	ENST00000681902.1	2149	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12.3108526685037	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGATGTTGTCTGTGGTTT	-709870	True	NA	NA	False	AGTAAA	-20	NA	714798	551601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_551796_551871_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_56254.known	chr17	-	2237	17	FSM	ENSG00000141252.21	ENST00000679361.1	2237	17	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_13	9.89633770644474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATGAGTCTAAAGGAGAT	-709896	True	NA	NA	False	AGTAAA	-6	NA	714824	551615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_56255.known	chr17	-	2161	16	FSM	ENSG00000141252.21	ENST00000681154.1	2161	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	10.6010481662061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTGATGAGTCTAAAGG	-709911	True	NA	NA	False	AGTAAA	-2	NA	714839	551619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_551951_553379_553463_560425_560574_562502_562746_586269_586365_601794_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_697417_697485_699330_699381_710532_710614_714622
transcript_56261.known	chr17	-	2939	7	FSM	ENSG00000141252.21	ENST00000576019.6	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	13.735598518691	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTCCGGATTTGTGTGTG	-709881	True	NA	NA	False	CATAAA	-19	NA	714809	651059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_56262.known	chr17	-	2882	5	FSM	ENSG00000141252.21	ENST00000680241.1	2882	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.7891197504849	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGACGTATGCAAGCATTT	-709900	True	NA	NA	False	AATAAA	-27	NA	714828	667409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_669888_697417_697485_699330_699381_710532_710614_714622
transcript_56263.nic	chr17	-	941	5	NIC	ENSG00000141252.21	novel	1057	8	NA	NA	-8	623	intron_retention	FALSE	canonical	0	0	junction_1	21.2190951739229	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTATAAGTCTTATT	-709937	True	NA	NA	False	NA	NA	NA	714865	696794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_697295_697417_697485_699330_699381_710532_710614_714622
transcript_56265.nic	chr17	-	1060	4	ISM	ENSG00000141252.21	ENST00000681295.1	1264	5	-26	22764	-8	619	5prime_fragment	FALSE	canonical	3	45	junction_2	2.86744175568088	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGTTTTATAAGTCT	-709937	True	NA	NA	False	NA	NA	NA	714865	696798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_697485_699330_699381_710532_710614_714622
transcript_56267.known	chr17	-	1369	3	FSM	ENSG00000141252.21	ENST00000571456.2	1369	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	24.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTGTGATTGTCTTT	-709886	True	NA	-1	True	AATAAA	-14	NA	714814	704999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_706096_710532_710614_714622
transcript_56268.known	chr17	-	1387	3	FSM	ENSG00000141252.21	ENST00000679865.1	1387	3	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	25	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTAGTTTCGTGTCTTT	NA	False	NA	NA	False	NA	NA	NA	715281	708140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_708788_710532_710614_714622
transcript_56269.known	chr17	-	2690	2	FSM	ENSG00000141252.21	ENST00000574029.6	2690	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTTAGTTTCGTGTCTTT	-709911	True	NA	NA	False	NA	NA	NA	714839	708140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_710614_714622
transcript_56270.known	chr17	-	2269	12	FSM	ENSG00000141252.21	ENST00000681133.1	2269	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_8	11.5629788263597	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATAGTCCTTTGCACTT	-709908	True	NA	NA	False	ATTAAA	-28	NA	714836	600870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_601897_623532_623675_627173_627317_628087_628232_631549_631629_653290_653411_655837_655954_661808_661896_697417_697485_699330_699381_710532_710614_714622
transcript_56271.known	chr17	+	2224	5	FSM	ENSG00000167695.15	ENST00000308278.13	2224	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	54.9203969395706	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTCTCATTTGTGAAAT	731398	True	NA	94	True	ATTAAA	-19	NA	732595	742968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_732770_733097_733182_737845_738048_740504_740601_741300
transcript_56273.known	chr17	+	2386	4	FSM	ENSG00000167695.15	ENST00000570699.1	2386	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.5034434281774	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTAATTGTCTTTTTT	732619	True	NA	9	True	TTTAAA	-13	NA	732676	742883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_733182_737845_738048_740504_740601_741300
transcript_56274.known	chr17	+	2013	4	FSM	ENSG00000167695.15	ENST00000301324.8	2013	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	58.9293362143734	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGAGTCTTTAATGGGT	731386	True	NA	11	True	NA	NA	NA	732583	742841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_732770_733097_733182_737845_738048_741300
transcript_56275.known	chr17	-	3744	2	FSM	ENSG00000179409.11	ENST00000319004.6	3744	2	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAAGAGTTATTTCGTCTT	-746924	True	NA	-10	True	AAAAAG	-25	NA	752264	744420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_748033_752132
transcript_56277.known	chr17	-	1809	10	FSM	ENSG00000167699.14	ENST00000301328.9	1809	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	327.074952711696	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTGAAATCAAGCTGTG	-771322	True	NA	-20	True	AATAAA	-17	NA	782279	759329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778621_778662_780683_780739_782165
transcript_56290.known	chr17	+	1729	4	FSM	ENSG00000171861.11	ENST00000304478.9	1729	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	38.8615777114391	2087	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTGTTTTGTGTCGTT	777298	True	NA	14	True	AATAAA	-23	NA	782352	792509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_783082_783328_787964_788133_791533
transcript_56292.known	chr17	+	572	3	FSM	ENSG00000171861.11	ENST00000571157.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_2	47	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGGGTCACTTGAGCCCA	777545	False	NA	NA	False	NA	NA	NA	782599	788198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_783082_783328_787964
transcript_56294.known	chr17	+	727	3	FSM	ENSG00000171861.11	ENST00000574509.1	727	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	138	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGAAGATGTAGAAAC	777312	True	NA	NA	False	NA	NA	NA	782366	791766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_787964_788133_791533
transcript_56296.known	chr17	+	770	2	FSM	ENSG00000171861.11	ENST00000574916.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGAGGTGGGGTTTCACCA	777303	True	NA	NA	False	NA	NA	NA	782357	783517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_782693_783082
transcript_56300.known	chr17	-	2059	9	FSM	ENSG00000167699.14	ENST00000301329.11	1765	9	-61	-233	-47	226	multi-exon	FALSE	canonical	3	689	junction_6	29.7885779284611	1034	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGATGCTATTATACCTT	-771384	True	NA	NA	False	NA	NA	NA	782341	759096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_760239_769868_769956_770043_770158_770420_770508_771324_771462_775774_775920_776867_776989_778694_778745_782165
transcript_56301.known	chr17	-	476	2	FSM	ENSG00000167693.17	ENST00000571080.1	476	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTCAGAAAAAGTTTTG	NA	False	NA	-16	True	AATAAA	-27	NA	979462	978298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_978631_979318
transcript_56305.known	chr17	+	3182	4	FSM	ENSG00000177370.5	ENST00000327158.5	3182	4	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_3	41.811747418904	1027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCCCATCCTACCTGTGT	NA	False	NA	NA	False	ATTAAA	-17	NA	997128	1003671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_997381_998778_998976_999511_999585_1001011
transcript_56315.known	chr17	-	780	2	FSM	ENSG00000108953.17	ENST00000573026.1	780	2	0	0	0	0	multi-exon	FALSE	canonical	2	121	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGGCTGCTCATTCTTG	-1361581	True	NA	2	True	NA	NA	NA	1400181	1344854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1345500_1400046
transcript_56316.known	chr17	-	258	2	FSM	ENSG00000108953.17	ENST00000572108.1	258	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTAGTAGGTCCTCTT	-1360989	False	NA	-7	True	AATAAA	-14	NA	1399589	1398877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1399017_1399470
transcript_56317.known	chr17	-	1374	1	FSM	ENSG00000108953.17	ENST00000576854.1	1374	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTCTCCAGTCCTTTTTC	NA	False	NA	38	True	NA	NA	NA	1400206	1398832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1398800_1400200
transcript_56318.known	chr17	-	2052	6	FSM	ENSG00000108953.17	ENST00000264335.13	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	11131	junction_2	760.132883119787	3723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGTGTAATTATGGATCA	NA	False	NA	-8	True	ATTAAA	-18	NA	1400222	1344274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1400046
transcript_56319.known	chr17	-	1818	7	FSM	ENSG00000108953.17	ENST00000571732.5	1818	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	5581.5333441826	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATCGCGCCTCCATCCTTT	NA	False	NA	-20	True	AATAAA	-25	NA	1400220	1344539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1345500_1354210_1354348_1361091_1361299_1361901_1362009_1364858_1365059_1369708_1369742_1400046
transcript_56320.known	chr17	-	3850	3	FSM	ENSG00000167193.8	ENST00000300574.3	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	53	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATCTTTGAATATTTTTC	-1452456	True	NA	-4	True	AATAAA	-42	NA	1456232	1420692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1423651_1436619_1437156_1455876
transcript_56321.known	chr17	-	3675	3	FSM	ENSG00000167193.8	ENST00000398970.5	3675	3	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_1	34.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTGAATATTTTTCACAA	-1452447	True	NA	0	True	AAAAAG	-4	NA	1456223	1420688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1423651_1436789_1437156_1455876
transcript_56326.known	chr17	-	2706	12	FSM	ENSG00000132376.20	ENST00000421807.7	2706	12	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_7	21.5299138428988	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTGTGACTGATGA	-1515241	True	NA	-6	True	NA	NA	NA	1516612	1494576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1495880_1496059_1496165_1496318_1496403_1496665_1496804_1497935_1498123_1506979_1507090_1508114_1508227_1509177_1509354_1509682_1509800_1513452_1513562_1513871_1513980_1516455
transcript_56327.known	chr17	-	3888	12	FSM	ENSG00000174238.16	ENST00000313486.12	3888	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	185.361206457835	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTACCAAACAAGCAAAACAT	-1558604	True	NA	NA	False	NA	NA	NA	1562792	1517717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1520539_1521578_1521646_1534098_1534222_1535181_1535293_1535440_1535519_1538868_1538953_1541565_1541641_1543019_1543028_1548295_1548388_1553003_1553150_1558528_1558560_1562540
transcript_56333.known	chr17	+	542	2	FSM	ENSG00000236618.3	ENST00000425081.3	601	2	54	5	54	-5	multi-exon	FALSE	canonical	3	158	junction_1	0	3436	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTACAAAGTGTAGTTTGT	1512446	True	NA	9	True	AATAAA	-18	NA	1516930	1518096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_1517094_1517717
transcript_56334.known	chr17	-	1560	8	FSM	ENSG00000167705.12	ENST00000301336.7	1560	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	50.1182275693572	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	-1649780	False	NA	-9	True	AATAAA	-24	NA	1649866	1646149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1646620_1646905_1646990_1647834_1647958_1648349_1648496_1648798_1649045_1649199_1649307_1649411_1649506_1649576
transcript_56335.nnic	chr17	-	829	4	NIC	ENSG00000167705.12	novel	1560	8	NA	NA	82	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	50.9116882454314	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTTCCTCGCCTGTCTGTC	-1648866	False	NA	-9	True	AATAAA	-24	NA	1648950	1646149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_1646620_1646905_1646990_1647834_1647958_1648798
transcript_56336.known	chr17	-	7280	43	FSM	ENSG00000174231.17	ENST00000304992.11	7280	43	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_29	202.864229699595	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCAGGGGCTGGTTTGTTT	-1663506	True	NA	-8	True	AATAAA	-30	NA	1684867	1650628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1650957_1651107_1651311_1651413_1651554_1651647_1651789_1653541_1653684_1653776_1654017_1655349_1655544_1656391_1656566_1656647_1656762_1658252_1658382_1658525_1658764_1659356_1659549_1659840_1660002_1660431_1660579_1660697_1660828_1660992_1661163_1661270_1661407_1661610_1661791_1661905_1662154_1673080_1673198_1673356_1673568_1673745_1673893_1674441_1674681_1675151_1675340_1675619_1675813_1675927_1676055_1676206_1676371_1676504_1676712_1676975_1677173_1677564_1677695_1678517_1678653_1678761_1678882_1679016_1679207_1679290_1679411_1679608_1679800_1680725_1680832_1680928_1681055_1681477_1681691_1681819_1682039_1682128_1682294_1683532_1683702_1684471_1684583_1684779
transcript_56339.known	chr17	-	865	3	FSM	ENSG00000174231.17	ENST00000571346.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	3	669	junction_2	72.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CCGTCTCAAAAAAAAAAAAA	-1663491	True	NA	NA	False	NA	NA	NA	1684852	1683020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1683702_1684471_1684583_1684779
transcript_56340.known	chr17	-	1383	4	FSM	ENSG00000186594.15	ENST00000334146.8	1488	4	59	46	0	9	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAACCTTTGGAGAGGTGGG	-1716102	True	NA	NA	False	AATATA	-25	NA	1716210	1711492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713702_1714015_1714370_1714454_1716129
transcript_56341.known	chr17	-	754	4	FSM	ENSG00000186594.15	ENST00000576749.6	1266	4	45	467	-1	-200	multi-exon	FALSE	canonical	1	1	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAAAATACTTAAGGATTTA	-1716104	True	NA	NA	False	NA	NA	NA	1716212	1711970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713855_1714015_1714370_1714454_1716129
transcript_56342.known	chr17	-	555	4	FSM	ENSG00000186594.15	ENST00000608198.6	1911	4	38	1318	-1	-464	multi-exon	FALSE	canonical	1	2	junction_1	1.24721912892465	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCAAGGATGTGGAGAAGA	-1716101	True	NA	NA	False	NA	NA	NA	1716209	1712824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712905_1713702_1714015_1714370_1714454_1716129
transcript_56343.known	chr17	-	557	4	FSM	ENSG00000186594.15	ENST00000574016.6	2092	4	64	1471	0	-614	multi-exon	FALSE	canonical	0	0	junction_1	2.05480466765633	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACCTCCTTCCAGATATCA	-1716102	True	NA	NA	False	NA	NA	NA	1716210	1712974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1713056_1713702_1714015_1714370_1714454_1716129
transcript_56344.known	chr17	-	525	3	FSM	ENSG00000186594.15	ENST00000690262.1	1326	3	36	765	0	92	multi-exon	FALSE	canonical	0	0	junction_1	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACAGGAAATTCATAAAAG	-1716103	True	NA	NA	False	NA	NA	NA	1716211	1712268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713702_1714015_1716129
transcript_56345.known	chr17	-	535	3	FSM	ENSG00000186594.15	ENST00000570416.6	1146	3	38	573	11	269	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCGTGTGGGAGTATACATC	-1716089	False	NA	NA	False	AAAACA	-12	NA	1716197	1712091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712400_1713855_1714015_1716129
transcript_56346.known	chr17	-	584	3	FSM	ENSG00000186594.15	ENST00000609442.6	1855	3	59	1212	0	-353	multi-exon	FALSE	canonical	1	2	junction_1	1.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAACAAAGGTGACTCTG	-1716102	True	NA	NA	False	NA	NA	NA	1716210	1712713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1712905_1713702_1714015_1716129
transcript_56347.nic	chr17	+	1347	2	ISM	ENSG00000167711.14	ENST00000382061.5	2262	10	9562	0	9562	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCTGGTTTGATGTCACC	NA	False	NA	2	True	AATAAA	-13	NA	1752587	1755265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_1752791_1754121
transcript_56349.known	chr17	+	1438	8	FSM	ENSG00000132386.11	ENST00000254722.9	1438	8	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	17.4636649027841	329	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1759607	True	NA	16	True	AATAAA	-17	NA	1762059	1777565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_1762114_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_56350.nic	chr17	+	1470	8	NIC	ENSG00000132386.11	novel	459	4	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	63.0225097460731	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCTGTTACTTCGTTCCTC	1762727	True	NA	16	True	AATAAA	-17	NA	1762797	1777565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_1762884_1766902_1766995_1769851_1770051_1771028_1771185_1771871_1772076_1775057_1775201_1776531_1776743_1777186
transcript_56354.known	chr17	+	4847	17	FSM	ENSG00000132383.12	ENST00000254719.10	4847	17	0	0	0	0	multi-exon	FALSE	canonical	3	810	junction_8	68.6626718093609	414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAAGTAAATGTTTAAGAAA	1822259	True	NA	NA	False	NA	NA	NA	1830004	1900082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_1830127_1842802_1842854_1843919_1843999_1844577_1844687_1853100_1853190_1872433_1872527_1875660_1875794_1877211_1877315_1878992_1879062_1879214_1879408_1879559_1879700_1880542_1880692_1883811_1883945_1888674_1888852_1891832_1891941_1895008_1895096_1897070
transcript_56363.known	chr17	-	4405	11	FSM	ENSG00000186532.12	ENST00000305513.12	4405	11	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	14.4761873433581	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAGATGGAGTTTCA	-1828141	True	NA	38	True	NA	NA	NA	1829902	1779484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_1781440_1783034_1783159_1783359_1783477_1784325_1784462_1786809_1786974_1787421_1787605_1799856_1801025_1804625_1804716_1811970_1812116_1827860_1828007_1829725
transcript_56371.nnic	chr17	-	646	3	NNC	ENSG00000186532.12	novel	4405	11	NA	NA	26	-9097	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_1	60	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCAATGCATACATTCTT	-1828115	True	NA	-13	True	ATTAAA	-14	NA	1829876	1821158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_1821508_1827860_1828007_1829725
transcript_56373.nnic	chr17	-	532	3	NNC	ENSG00000186532.12	novel	4405	11	NA	NA	26	-10908	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	62	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTATGTCCATTTCTTTAA	-1828115	True	NA	-18	True	AATAAA	-1	NA	1829876	1822969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_1823205_1827860_1828007_1829725
transcript_56374.nnic	chr17	-	922	3	NNC	ENSG00000186532.12	novel	4405	11	NA	NA	26	-12544	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	61.5	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGATTTCGTGAGAACTCA	-1828115	True	NA	NA	False	AATAAA	-23	NA	1829876	1824605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_1825231_1827860_1828007_1829725
transcript_56375.known	chr17	+	2607	13	FSM	ENSG00000108963.19	ENST00000571418.7	2607	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	53.2139288365577	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2027993	True	NA	14	True	AATAAA	-25	NA	2030158	2043898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036654_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_56376.known	chr17	+	2646	13	FSM	ENSG00000108963.19	ENST00000263083.12	2646	13	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_12	21.5153369070118	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGAGGGTTTCTGAGATT	2027987	True	NA	14	True	AATAAA	-25	NA	2030152	2043898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2030231_2033504_2033658_2033778_2033843_2035969_2036092_2036528_2036687_2036834_2036957_2039754_2039824_2040217_2040375_2040504_2040606_2041102_2041182_2041480_2041622_2041767_2041876_2042604
transcript_56379.known	chr17	+	1031	2	FSM	ENSG00000262664.3	ENST00000572195.3	1031	2	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	0	507	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGCATCTTTTTCCTG	2039431	True	NA	18	True	AATAAA	-14	NA	2042021	2043425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2042232_2042604
transcript_56382.nic	chr17	-	843	2	ISM	ENSG00000070366.14	ENST00000263073.11	5974	19	-130	240262	-130	-113368	5prime_fragment	FALSE	canonical	3	30	junction_1	0	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGGATGGGAAAAGG	NA	False	NA	NA	False	GGGGCT	-16	NA	2303915	2300104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_2300665_2303632
transcript_56386.known	chr17	+	2482	8	FSM	ENSG00000167720.13	ENST00000344595.10	2482	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	9.84160265694276	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGACCTGCAGGGTCTG	2303123	True	NA	7	True	AATAAA	-24	NA	2303949	2325260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2304018_2315556_2315729_2317869_2317997_2318825_2318930_2321305_2321426_2321541_2321617_2323135_2323346_2323654
transcript_56396.known	chr17	-	4245	15	FSM	ENSG00000167721.11	ENST00000301364.10	4245	15	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_7	62.143226599887	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTCCATTGCCTGGATCA	-2321779	True	NA	-21	True	AATAAA	-18	NA	2336457	2322395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2324375_2324503_2324579_2324688_2324830_2325303_2325421_2329342_2329476_2330514_2330626_2330946_2331110_2332168_2332360_2332960_2333125_2333556_2333717_2334471_2334897_2335259_2335395_2335510_2335731_2336036_2336141_2336330
transcript_56398.known	chr17	-	5740	10	FSM	ENSG00000127804.13	ENST00000263092.11	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_8	16.164280083483	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTAGCCATGGTCTCTTTA	-2508376	True	NA	-7	True	AATAAA	-33	NA	2511888	2416048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_2420597_2420730_2420905_2438108_2438199_2441489_2441560_2464207_2464351_2467760_2467877_2473523_2473665_2477685_2477886_2502203_2502332_2511758
transcript_56399.known	chr17	+	5384	12	FSM	ENSG00000007168.14	ENST00000675764.1	5384	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	203.840076676556	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591604	True	NA	12	True	ATTAAA	-41	NA	2593949	2685608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2653853_2653952_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_56400.known	chr17	+	5337	12	FSM	ENSG00000007168.14	ENST00000674608.1	5337	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	202.882777700827	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591607	True	NA	12	True	ATTAAA	-41	NA	2593952	2685608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2662780_2662835_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_56408.known	chr17	+	5589	11	FSM	ENSG00000007168.14	ENST00000397195.10	5589	11	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	29.6292085618229	1063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGATTTTTTTTTTTTT	2589236	True	NA	19	True	ATTAAA	-15	NA	2593653	2685615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_56414.known	chr17	+	5297	11	FSM	ENSG00000007168.14	ENST00000676188.1	5297	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	159.933861330239	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2594245	False	NA	12	True	ATTAAA	-41	NA	2594326	2685608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594395_2638098_2638321_2665371_2665457_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_56416.known	chr17	+	5204	10	FSM	ENSG00000007168.14	ENST00000676353.1	5204	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	163.574047867632	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACTAGATGTGATTTTTT	2591601	True	NA	12	True	ATTAAA	-41	NA	2593946	2685608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2666015_2666091_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_56419.known	chr17	+	5127	9	FSM	ENSG00000007168.14	ENST00000674717.1	5127	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	177.00070621328	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAAACTAGATGTGATTTT	2591601	True	NA	10	True	ATTAAA	-39	NA	2593946	2685606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2594007_2638098_2638321_2666991_2667199_2670162_2670332_2672654_2672758_2674059_2674289_2676504_2676607_2680163_2680321_2681728
transcript_56425.known	chr17	+	443	2	FSM	ENSG00000262050.1	ENST00000572876.1	443	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTCTCGGCCGGGCGG	2712215	False	NA	NA	False	TTTAAA	-29	NA	2712308	2712833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_2712400_2712481
transcript_56431.nnic	chr17	+	437	3	NNC	ENSG00000132359.15	novel	3175	26	NA	NA	-3983	-235419	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGATCTAGGTACTAT	2751710	True	NA	9	True	AATAAA	-22	NA	2751721	2772671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_2751853_2770328_2770446_2772482
transcript_56432.nnic	chr17	+	397	3	NNC	ENSG00000132359.15	novel	3175	26	NA	NA	-28	-235419	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_2	4	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATGATCTAGGTACTAT	2755497	True	NA	9	True	AATAAA	-22	NA	2755676	2772671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_2755768_2770328_2770446_2772482
transcript_56439.known	chr17	-	534	4	FSM	ENSG00000261848.5	ENST00000572821.5	534	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTTATTCCCTTCCTTTT	-3176813	True	NA	NA	False	NA	NA	NA	3176935	3134968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3135191_3160233_3160289_3163692_3163890_3176875
transcript_56443.nnic	chr17	-	721	3	NIC	ENSG00000261848.5	novel	534	4	NA	NA	4	65	combination_of_known_splicesites	TRUE	canonical	2	3	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTGGTTGTTCTTTTGT	-3176905	True	NA	NA	False	AATAAA	-23	NA	3177027	3134903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_3135191_3163692_3163890_3176790
transcript_56444.nnic	chr17	-	643	3	NIC	ENSG00000261848.5	novel	534	4	NA	NA	-3	65	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	1.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTGGTTGTTCTTTTGT	-3176912	True	NA	NA	False	AATAAA	-23	NA	3177034	3134903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_3135191_3163692_3163890_3176875
transcript_56449.known	chr17	-	3788	7	FSM	ENSG00000197417.9	ENST00000225519.5	3788	7	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_2	11.5289490703475	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTGCCTTTTTTTT	-3629614	True	NA	NA	False	AAAAAG	-13	NA	3636250	3608239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3610973_3615336_3615538_3621236_3621413_3623338_3623492_3624047_3624232_3630204_3630347_3636051
transcript_56451.known	chr17	+	4139	12	FSM	ENSG00000040531.16	ENST00000046640.9	4139	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	8.98575548592841	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCAAAGAGGAAAATGAC	3635637	True	NA	NA	False	ATTAAA	-22	NA	3636759	3663103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_56453.known	chr17	+	2657	12	FSM	ENSG00000040531.16	ENST00000673965.1	2657	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	17.9231601404855	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGAGCTTGTCAGTCC	3636283	True	NA	-73	True	NA	NA	NA	3636458	3661448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636704_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_56455.known	chr17	-	1998	12	FSM	ENSG00000083454.22	ENST00000547178.5	1998	12	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	10.9333064569985	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3696085	False	NA	0	True	AATAAA	-17	NA	3696096	3673226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
transcript_56457.known	chr17	-	2060	12	FSM	ENSG00000083454.22	ENST00000225328.10	2060	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_6	6.84177735353701	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3696144	False	NA	0	True	AATAAA	-17	NA	3696155	3673226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3690955_3691028_3691643_3691795_3695868
transcript_56463.known	chr17	-	1863	11	FSM	ENSG00000083454.22	ENST00000551178.5	1863	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	14.5976025428835	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCCTGATTTTTTTCTC	-3696022	False	NA	0	True	AATAAA	-17	NA	3696033	3673226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689628_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_56464.known	chr17	-	2031	11	FSM	ENSG00000083454.22	ENST00000345901.7	2031	11	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	11.894956914592	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGTGTCAATTTCAAACG	-3696205	False	NA	-18	True	CATAAA	-7	NA	3696216	3673244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3673878_3679589_3679785_3681895_3681979_3688011_3688106_3688625_3688760_3689491_3689631_3690069_3690151_3690426_3690524_3690604_3690681_3691643_3691795_3695868
transcript_56467.known	chr17	+	2417	10	FSM	ENSG00000040531.16	ENST00000673669.1	2417	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	21.1974841274462	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTAAAACCTACTCGCTT	3635603	True	NA	-9	True	NA	NA	NA	3636725	3661512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636832_3637106_3637317_3647443_3647523_3654997_3655102_3655220_3655353_3656486_3656587_3656675_3656796_3658004_3658176_3659857_3659976_3660235
transcript_56470.known	chr17	+	803	6	FSM	ENSG00000040531.16	ENST00000399306.7	803	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	19.8131269616888	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCATTGCTGAGAGGGGAT	3635706	False	NA	NA	False	AATAAA	-21	NA	3636828	3650519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3636832_3637106_3637317_3640187_3640268_3647443_3647523_3648846_3648932_3650173
transcript_56477.known	chr17	+	762	2	FSM	ENSG00000127774.7	ENST00000397133.2	762	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGAGTTCTTTCCTGCTG	3644837	True	NA	25	True	ATTAAA	-18	NA	3668821	3669668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3669013_3669097
transcript_56478.known	chr17	-	1280	4	FSM	ENSG00000213977.8	ENST00000225525.4	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_1	35.9289422177844	1638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGGGCTTTGCTGAGGCA	-3662660	True	NA	-6	True	AATAAA	-15	NA	3668578	3662894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3663886_3664194_3664273_3664678_3664799_3668487
transcript_56479.known	chr17	-	1302	3	FSM	ENSG00000213977.8	ENST00000611779.4	1302	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	233	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGGGGCTTTGCTGAGGC	-3668669	False	NA	-7	True	AATAAA	-14	NA	3668679	3662895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3663886_3664678_3664799_3668487
transcript_5648.known	chr1	+	708	4	FSM	ENSG00000232022.8	ENST00000635298.1	708	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.43650214343336	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	46442401	True	NA	7	True	AATAAA	-21	NA	46442861	46482493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46455819_46455911_46477347_46477505_46482209
transcript_56480.known	chr17	+	656	2	FSM	ENSG00000127774.7	ENST00000248378.6	656	2	0	0	0	0	multi-exon	FALSE	canonical	3	1160	junction_1	0	9315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGAGTTCTTTCCTG	3644827	True	NA	22	True	ATTAAA	-15	NA	3668811	3669665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3668900_3669097
transcript_5649.nnic	chr1	+	658	4	NNC	ENSG00000232022.8	novel	708	4	NA	NA	2	-18	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.18993502999218	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGCAAGCCACTAAGT	46442371	True	NA	-11	True	AATAAA	-3	NA	46442831	46482475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46443038_46453897_46453993_46455819_46455911_46482209
transcript_56490.known	chr17	-	721	5	FSM	ENSG00000083457.12	ENST00000570360.1	721	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	278.314907074702	539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCATTGTGCAAAAAGTAAAC	-3719108	True	NA	-75	True	NA	NA	NA	3723854	3714691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723287_3723384_3723687
transcript_56503.known	chr17	+	2797	1	FSM	ENSG00000177602.5	ENST00000325418.5	2797	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTTTATATTTATAAACCCT	3720796	True	NA	NA	False	AATAAA	-22	NA	3723902	3726699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_3723900_3726700
transcript_56504.known	chr17	-	672	4	FSM	ENSG00000083457.12	ENST00000572179.5	672	4	0	0	0	0	multi-exon	FALSE	canonical	3	562	junction_3	30.554141381416	5922	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTGCCTTTAATCTGGAA	-3719091	True	NA	-11	True	AATAAA	-19	NA	3723837	3714627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3714943_3716687_3716799_3720306_3720403_3723687
transcript_56505.known	chr17	-	731	3	FSM	ENSG00000083457.12	ENST00000572433.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_1	7.5	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGCAGTAGTGCCTTTA	-3720592	False	NA	-19	True	AATAAA	-11	NA	3720619	3714635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3714943_3716687_3716799_3720306
transcript_5651.nic	chr1	+	676	3	FSM	ENSG00000232022.8	ENST00000455247.2	575	3	-119	18	-111	-18	multi-exon	FALSE	canonical	2	10	junction_2	1	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGCAAGCCACTAAGT	NA	False	NA	-11	True	AATAAA	-3	NA	46442718	46482475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46455819_46455911_46482209
transcript_56513.known	chr17	-	12772	13	FSM	ENSG00000074356.17	ENST00000389005.6	12772	13	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_6	32.025597400968	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTTGTTCTAGTGGCATT	-3838720	True	NA	-2	True	AATAAA	-20	NA	3846246	3802157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3813280_3814321_3814484_3816115_3816271_3818262_3818573_3821248_3821353_3821952_3822053_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_56519.nic	chr17	-	1264	9	NIC	ENSG00000074356.17	novel	645	5	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_1	77.3918600370866	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATGGAATTATATGTAGT	-3838737	True	NA	NA	False	AATAAA	-22	NA	3846263	3822503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_3822899_3824059_3824093_3824941_3825051_3825766_3825844_3826086_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_5652.nnic	chr1	+	429	3	NNC	ENSG00000232022.8	novel	575	3	NA	NA	2	8706	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGCAAATATGATCATGAC	46442371	True	NA	NA	False	AATAAA	-17	NA	46442831	46454414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_46443038_46453897_46453993_46454286
transcript_56521.nic	chr17	-	649	5	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-17	23930	-17	-3584	5prime_fragment	FALSE	canonical	3	165	junction_3	21.0297408448131	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAACAACACAAAGGAGGG	-3838737	True	NA	15	True	NA	NA	NA	3846263	3826087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_3826216_3829242_3829369_3840099_3840206_3843085_3843152_3846040
transcript_56524.nic	chr17	-	1391	3	ISM	ENSG00000074356.17	ENST00000389005.6	12772	13	-17	36946	-17	-16600	5prime_fragment	FALSE	canonical	3	165	junction_1	17.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGTGAGTCTATGTTCTT	-3838737	True	NA	-7	True	AATAAA	-19	NA	3846263	3839103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_3840206_3843085_3843152_3846040
transcript_56526.nnic	chr17	-	504	3	NNC	ENSG00000074356.17	novel	12772	13	NA	NA	-17	-19107	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	99.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAGAGAGAATTG	-3838737	True	NA	NA	False	NA	NA	NA	3846263	3841610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_3841826_3843085_3843152_3846040
transcript_56527.known	chr17	-	518	2	FSM	ENSG00000074356.17	ENST00000572988.1	518	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTTCATCAGTTGTTCTAG	-3803371	False	NA	-9	True	AATAAA	-13	NA	3803382	3802164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_3802482_3803181
transcript_56529.nic	chr17	-	1953	10	ISM	ENSG00000185722.18	ENST00000574367.5	5033	25	-49	28187	-10	0	5prime_fragment	FALSE	canonical	3	96	junction_2	17.6348420554591	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	-4258773	True	NA	NA	False	NA	NA	NA	4264005	4194460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_56531.nnic	chr17	-	1759	7	NNC	ENSG00000185722.18	novel	948	4	NA	NA	-10	9904	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	50.2582221023475	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTGTTGGAGCACTTAAA	-4258773	True	NA	NA	False	AATAAA	-19	NA	4264005	4206612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4207576_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255_4242449_4263931
transcript_56532.known	chr17	-	948	4	FSM	ENSG00000185722.18	ENST00000575955.1	948	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	22.4845626053867	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGTTACTGCATTTTAG	-4258733	True	NA	NA	False	NA	NA	NA	4263965	4216516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4217119_4235771_4235891_4242255_4242449_4263931
transcript_56535.known	chr17	-	1881	9	FSM	ENSG00000185722.18	ENST00000570934.5	1881	9	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_2	16.985287751463	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGATGGATATTAAAACAGC	NA	False	NA	NA	False	NA	NA	NA	4242450	4194460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4195178_4195402_4195472_4197372_4197578_4206320_4206487_4207932_4208083_4209823_4209948_4216982_4217119_4235771_4235891_4242255
transcript_56536.known	chr17	+	694	4	FSM	ENSG00000167740.10	ENST00000577075.6	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	28.9635786616379	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGCCTCTTCTGTTAATAA	NA	False	NA	NA	False	NA	NA	NA	4143167	4157085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4143314_4149890_4150032_4154673_4154861_4156865
transcript_56538.nnic	chr17	+	1306	4	NNC	ENSG00000167740.10	novel	1969	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	33.8657480190367	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	4142741	True	NA	9	True	ATTAAA	-25	NA	4143196	4157697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_4143343_4149890_4150032_4154673_4154861_4156865
transcript_56539.known	chr17	+	1969	4	FSM	ENSG00000167740.10	ENST00000301391.8	1969	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.1233464566864	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGGGCTTGCTGCTT	4142741	True	NA	9	True	ATTAAA	-25	NA	4143196	4157697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4144006_4149890_4150032_4154673_4154861_4156865
transcript_56541.known	chr17	+	1588	4	FSM	ENSG00000167740.10	ENST00000575251.5	1588	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	30.7354301526214	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATCAGGTGTGGTGTG	4142755	True	NA	42	True	TTTAAA	-29	NA	4143210	4157572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4143764_4149890_4150032_4154673_4154861_4156865
transcript_56547.nnic	chr17	-	1712	6	NNC	ENSG00000132388.13	novel	4167	6	NA	NA	24559	549	at_least_one_novel_splicesite	FALSE	canonical	2	40	junction_5	487.533793700498	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	NA	False	NA	-8	True	AATATA	-16	NA	4307364	4271430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4307242
transcript_56548.nnic	chr17	-	1763	6	NNC	ENSG00000132388.13	novel	4167	6	NA	NA	653	549	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_5	472.479671520373	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCAAGTTGTTGGCTTTT	-4347591	False	18381	-8	True	AATATA	-16	NA	4365972	4271430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4365799
transcript_56549.known	chr17	-	4167	6	FSM	ENSG00000132388.13	ENST00000396981.7	4167	6	0	0	0	0	multi-exon	FALSE	canonical	3	1153	junction_3	71.6184333813579	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACGAGCTATTTTGGTTTT	-4348294	True	NA	-20	True	AATAAA	-20	NA	4366675	4269258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4366270
transcript_56552.nnic	chr17	-	1214	6	NNC	ENSG00000132388.13	novel	1514	7	NA	NA	653	0	at_least_one_novel_splicesite	FALSE	canonical	3	78	junction_5	472.479671520373	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCCAGAATGTTCTCA	-4347591	False	18381	NA	False	NA	NA	NA	4365972	4271979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4272517_4282797_4282922_4289229_4289409_4296716_4296815_4307020_4307124_4365799
transcript_56559.known	chr17	+	1877	12	FSM	ENSG00000182557.8	ENST00000355530.7	1877	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGCCGTGTTATTTATAG	NA	False	NA	NA	False	AATAAA	-39	NA	4433939	4488204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4434167_4439657_4439724_4445031_4445169_4446047_4446200_4446895_4446963_4448154_4448304_4449234_4449388_4453015_4453206_4478571_4478638_4486227_4486327_4486411_4486584_4487805
transcript_5656.known	chr1	+	398	2	FSM	ENSG00000232022.8	ENST00000635606.2	492	2	94	0	62	0	multi-exon	FALSE	canonical	3	11	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGGGTAATTTGTTAT	46442463	True	NA	7	True	AATAAA	-21	NA	46442923	46482493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46482209
transcript_56560.known	chr17	-	4558	26	FSM	ENSG00000132382.15	ENST00000254718.9	4558	26	0	0	0	0	multi-exon	TRUE	canonical	3	633	junction_19	58.6923368081387	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCGGACCTGGTTCTTGT	-4537460	True	NA	-7	True	AATAAA	-36	NA	4555384	4538903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4539968_4540347_4540485_4541462_4541565_4541783_4541892_4542463_4542533_4542615_4542742_4542912_4543166_4544488_4544647_4544750_4544922_4545025_4545176_4545258_4545346_4545609_4545762_4545845_4545943_4547957_4548058_4548142_4548311_4548523_4548650_4549331_4549443_4550057_4550354_4551879_4551998_4552124_4552293_4552450_4552627_4553809_4553918_4554018_4554094_4554194_4554279_4554860_4554957_4555126
transcript_56564.known	chr17	+	1919	8	FSM	ENSG00000188176.12	ENST00000338859.8	1919	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.06858356939596	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4583975	True	NA	9	True	CATAAA	-20	NA	4583998	4608319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4584099_4592360_4592449_4592928_4593172_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_56565.nic	chr17	+	1666	7	NIC	ENSG00000188176.12	novel	1919	8	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	10.0291242555536	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGTTTGTCATTTCTG	4583985	True	NA	9	True	CATAAA	-20	NA	4584008	4608319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4584099_4592360_4592449_4593821_4593898_4595144_4595328_4596859_4596978_4597171_4597324_4607360
transcript_56568.known	chr17	-	3465	17	FSM	ENSG00000141456.16	ENST00000574876.5	3465	17	0	0	0	0	multi-exon	FALSE	canonical	3	725	junction_9	59.3806576251897	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGCTGCTTCTGCCTTTTG	-4694213	True	NA	-2	True	AATAAA	-20	NA	4704129	4671384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4671532_4671690_4673146_4673249_4673457_4673618_4673675_4674509_4674670_4674808_4674957_4675078_4675196_4675273_4675363_4675796_4675885_4676035_4676163_4676356_4676508_4676752_4676813_4682501_4682574_4682802_4682953_4690887_4690994_4691377_4691443_4703862
transcript_5657.nic	chr1	+	713	2	FSM	ENSG00000232022.8	ENST00000692135.1	718	2	-1	6	-1	-6	multi-exon	FALSE	canonical	3	29	junction_1	0	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGCCTCATGATCTCTGG	46442368	True	NA	1	True	AATAAA	-16	NA	46442828	46445702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_46443038_46445198
transcript_56582.known	chr17	+	472	2	FSM	ENSG00000244184.1	ENST00000497885.1	472	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	184	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGGGTCTGCGTGTGGCTT	4703968	True	NA	5	True	CATAAA	-17	NA	4704229	4705529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4704371_4705198
transcript_56583.known	chr17	-	402	1	FSM	ENSG00000213939.4	ENST00000466297.1	402	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	329	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATAAATCTTTGGCGCG	-4705194	False	NA	NA	False	AAGAAA	-4	NA	4705217	4704815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4704800_4705200
transcript_56585.nic	chr17	+	1854	15	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	2	14	junction_13	119.133093125089	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710446	False	NA	19	True	AATAAA	-15	NA	4710591	4721497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720549_4720641_4720945
transcript_56586.known	chr17	+	1778	15	FSM	ENSG00000141480.18	ENST00000269260.7	1778	15	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	62.8347362661184	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710486	False	NA	19	True	AATAAA	-15	NA	4710631	4721497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_56590.known	chr17	+	1348	14	FSM	ENSG00000141480.18	ENST00000574954.5	1348	14	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	76.5409740600364	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCCCACTGTCAATGGGG	4710484	False	NA	NA	False	NA	NA	NA	4710629	4721096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_56595.known	chr17	+	1236	14	FSM	ENSG00000141480.18	ENST00000381488.10	1236	14	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	117.400694533393	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGGGGTTGGGAGAGG	4708606	True	NA	NA	False	NA	NA	NA	4710692	4721061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4710745_4715012_4715044_4715972_4716034_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718260_4718346_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_56600.nic	chr17	+	1769	13	NIC	ENSG00000141480.18	novel	1778	15	NA	NA	-71	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_7	128.100519341475	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGTGTGTTTTCTCTGT	4710157	True	NA	19	True	AATAAA	-15	NA	4710524	4721497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4710745_4715972_4716034_4716146_4716192_4716411_4716609_4717216_4717277_4717684_4717753_4717887_4718024_4718611_4718685_4719282_4719421_4720215_4720300_4720392_4720473_4720585_4720641_4720945
transcript_56604.known	chr17	-	2324	6	FSM	ENSG00000161921.17	ENST00000293778.12	2324	6	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	6.24819974072532	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAGAAGTATGTATTTTCA	-4739699	True	NA	NA	False	ATTAAA	-29	NA	4739928	4733532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4734480_4734582_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_56605.known	chr17	-	1668	5	FSM	ENSG00000161921.17	ENST00000574412.6	1668	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	6.53834841531101	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATCTGCTTTTCACACTGG	-4739693	True	NA	NA	False	TTTAAA	-16	NA	4739922	4734285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4734653_4735091_4735509_4738407_4738491_4738781_4738921_4739260
transcript_56607.known	chr17	+	706	2	FSM	ENSG00000161920.11	ENST00000674339.1	706	2	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGATCAGACTCTCACTGGG	4730125	True	NA	NA	False	AATAAA	-34	NA	4731427	4733608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4731575_4733049
transcript_56608.nic	chr17	+	470	2	ISM	ENSG00000141497.14	ENST00000573751.2	2409	13	4682	3	1454	0	3prime_fragment	FALSE	canonical	3	11	junction_1	0	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGAGTCATGGATCTTT	NA	False	NA	10	True	AATAAA	-16	NA	4745200	4746113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_4745376_4745818
transcript_5661.known	chr1	-	2686	13	FSM	ENSG00000079277.22	ENST00000650508.1	2686	13	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	38.1454635427188	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTGGTCCTTTTTTTT	-46602510	True	NA	-1	True	AATAAA	-23	NA	46604294	46557407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46558801_46560233_46560278_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_56610.known	chr17	+	836	3	FSM	ENSG00000161920.11	ENST00000293777.6	836	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	17	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATCAGACTCTCACTGG	4730125	True	NA	NA	False	AATAAA	-33	NA	4731427	4733607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4731575_4731775_4731907_4733049
transcript_56611.known	chr17	+	802	2	FSM	ENSG00000161920.11	ENST00000573708.1	802	2	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGGCTTGGTGGTGAGTA	4730128	True	NA	NA	False	NA	NA	NA	4731430	4732433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4731575_4731775
transcript_56612.known	chr17	-	698	3	FSM	ENSG00000182853.12	ENST00000328739.6	698	3	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	-4786258	False	18	1	True	ATTAAA	-16	NA	4786364	4785284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4785660_4785936_4786053_4786157
transcript_56613.known	chr17	-	712	3	FSM	ENSG00000182853.12	ENST00000416307.6	712	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTCTCGCCTGTTTAT	-4786292	False	NA	1	True	ATTAAA	-16	NA	4786398	4785284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4785660_4785956_4786053_4786157
transcript_56640.known	chr17	+	824	6	FSM	ENSG00000142507.10	ENST00000270586.8	824	6	0	0	0	0	multi-exon	FALSE	canonical	3	7142	junction_3	502.900944520887	53734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTACTTTGGGGTTCT	4742593	True	NA	29	True	AATAAA	-16	NA	4796163	4798495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798279
transcript_56641.known	chr17	+	871	6	FSM	ENSG00000142507.10	ENST00000614486.4	871	6	0	0	0	0	multi-exon	FALSE	canonical	1	38	junction_5	3029.86382532285	966	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTTGGGGTTCTTTTTTTT	4742573	True	NA	36	True	AATAAA	-23	NA	4796143	4798502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4796297_4796727_4796796_4797437_4797570_4797681_4797812_4798008_4798154_4798259
transcript_56642.nnic	chr17	-	382	2	NNC	ENSG00000262165.2	novel	562	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTGTGTGTGTGTGTGCT	-4806939	True	NA	2	True	NA	NA	NA	4807011	4801158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_4801456_4806926
transcript_56643.known	chr17	+	3391	25	FSM	ENSG00000129219.14	ENST00000572940.5	3391	25	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_23	22.417402404283	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCATGCGTCTTCCTTGG	4804623	True	NA	11	True	AATAAA	-12	NA	4807168	4823428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819550_4821792_4821908_4822639
transcript_56644.known	chr17	+	3443	25	FSM	ENSG00000129219.14	ENST00000263088.11	3443	25	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_23	14.0608178006196	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCGTCTTCCTTGGAG	4804606	True	NA	13	True	AATAAA	-14	NA	4807151	4823430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801_4810952_4814417_4814502_4814632_4814712_4815475_4815587_4815763_4815935_4816619_4816747_4816936_4817056_4817145_4817260_4818001_4818107_4818296_4818386_4818493_4818608_4818773_4818824_4819083_4819219_4819428_4819583_4821792_4821908_4822639
transcript_56647.nic	chr17	+	1465	10	ISM	ENSG00000129219.14	ENST00000263088.11	3443	25	-30	12129	-30	1976	5prime_fragment	FALSE	canonical	3	120	junction_6	11.2918631252556	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTGAG	4804576	True	NA	5	True	AATAAA	-17	NA	4807121	4811301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_4807226_4807771_4807882_4807983_4808115_4808273_4808417_4809099_4809206_4809297_4809364_4809492_4809552_4809690_4809784_4809876_4810030_4810801
transcript_56655.known	chr17	+	1511	11	FSM	ENSG00000108523.16	ENST00000572430.5	1511	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	269.367796887453	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGACTGGGTCTTCACTTCT	4935108	True	NA	-32	True	GGGGCT	-26	NA	4940119	4945170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940231_4940486_4940643_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_56656.known	chr17	+	1728	11	FSM	ENSG00000108523.16	ENST00000571816.5	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	250.294146955138	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4939879	False	NA	-11	True	NA	NA	NA	4940007	4945191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940231_4940486_4940727_4940872_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_5666.known	chr1	-	1270	12	FSM	ENSG00000079277.22	ENST00000428112.7	1270	12	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_11	41.8896622289186	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCACTAGCTGATGGCCTCT	-46602471	True	NA	NA	False	NA	NA	NA	46604255	46558698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46558801_46561477_46561643_46562648_46562844_46565040_46565137_46568442_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_56663.nic	chr17	+	1926	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-21	0	intron_retention	TRUE	canonical	3	189	junction_1	181.562967344971	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4939858	True	NA	20	True	AATAAA	-21	NA	4939986	4945222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4940231_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_56666.nnic	chr17	+	1482	10	NIC	ENSG00000108523.16	novel	1728	11	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	229.05059013132	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4939866	True	NA	20	True	AATAAA	-21	NA	4939994	4945222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_4940231_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_56679.known	chr17	-	893	8	FSM	ENSG00000108528.14	ENST00000576951.1	893	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	447.920410204258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTCTCTTCCTCAGTGGCT	-4939840	False	121548	NA	False	NA	NA	NA	4939913	4937762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939059_4939213_4939848
transcript_56686.known	chr17	-	952	7	FSM	ENSG00000108528.14	ENST00000544061.6	952	7	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_6	446.065920639041	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCGCCTGCTGCGCCTATA	-4940039	False	121548	NA	False	GGGGCT	-4	NA	4940053	4937723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4937897_4938022_4938075_4938153_4938254_4938338_4938430_4938511_4938603_4938768_4938976_4939815
transcript_56692.known	chr17	+	535	2	FSM	ENSG00000108523.16	ENST00000571365.1	535	2	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGCGCAGAACTCCGCTTC	4939917	False	NA	NA	False	NA	NA	NA	4940045	4940836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940231_4940486
transcript_56693.known	chr17	+	1757	9	FSM	ENSG00000108523.16	ENST00000575111.5	1757	9	0	0	0	0	multi-exon	FALSE	canonical	3	685	junction_5	41.7342784770505	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAATAAAATTGTTTCT	4940147	False	NA	-11	True	NA	NA	NA	4940380	4945191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_56694.known	chr17	+	1436	10	FSM	ENSG00000108523.16	ENST00000576229.5	1436	10	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	217.913733072811	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGGGTCTTCACTTCTTG	4940253	False	NA	-30	True	GGGGCT	-28	NA	4940486	4945172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940727_4940922_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_56695.known	chr17	+	1775	10	FSM	ENSG00000108523.16	ENST00000262482.11	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	172.677033865802	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGGGTAAGATCATTCTC	4940084	False	NA	20	True	AATAAA	-21	NA	4940267	4945222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4940361_4940486_4940994_4941076_4941158_4942340_4942467_4942576_4942665_4942850_4942942_4943178_4943285_4943425_4943520_4944557_4944639_4944714
transcript_56702.known	chr17	+	1453	12	FSM	ENSG00000108515.18	ENST00000519602.6	1453	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_1	30.4937332675919	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGCTGTGTGCTTCTTTG	4950319	True	NA	9	True	AATAAA	-17	NA	4951118	4957129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4951183_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_56705.known	chr17	+	1521	12	FSM	ENSG00000108515.18	ENST00000323997.10	1521	12	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_1	34.5734336456417	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCTGTGTGCTTCTTTGTG	4951024	False	NA	11	True	AATAAA	-19	NA	4951094	4957131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4951225_4951827_4951915_4952794_4952891_4953050_4953110_4953271_4953342_4953711_4953846_4955074_4955298_4955406_4955605_4955941_4956144_4956572_4956682_4956830_4956890_4956977
transcript_5673.known	chr1	-	738	8	FSM	ENSG00000079277.22	ENST00000496619.6	738	8	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	45.1654554648455	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTCCAGAAAAGGTACTTT	-46602510	True	NA	NA	False	AATATA	-9	NA	46604294	46568455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46568499_46572062_46572168_46574946_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604226
transcript_56743.known	chr17	-	807	3	FSM	ENSG00000108518.8	ENST00000225655.6	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	30661	junction_2	679	8028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCTGTGTGATTTGAGCT	-4826982	True	NA	-44	True	AATAAA	-18	NA	4948530	4945651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4945998_4946627_4946821_4948262
transcript_56744.known	chr17	-	1173	2	FSM	ENSG00000108518.8	ENST00000574872.1	1173	2	0	0	0	0	multi-exon	FALSE	canonical	3	32019	junction_1	0	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCTACTAACAAGGTGC	-4947434	False	NA	34	True	AATAAA	-3	NA	4947469	4945666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4945998_4946627
transcript_56750.known	chr17	-	1668	7	FSM	ENSG00000091640.8	ENST00000573366.5	1668	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_6	366.258295317511	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTACATTCAATAAATACTG	-4967179	False	NA	-31	True	GGGGCT	-8	NA	4967191	4959255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4966400
transcript_56763.known	chr17	-	431	2	FSM	ENSG00000091640.8	ENST00000570341.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGCCGCGGCGGACGGA	-4966737	False	NA	NA	False	NA	NA	NA	4966749	4966237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4966320_4966400
transcript_56764.known	chr17	-	579	2	FSM	ENSG00000091640.8	ENST00000571023.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTAGCTGGGCTTGGT	-4954793	True	NA	NA	False	AATAAA	-34	NA	4967808	4965829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4966320_4967719
transcript_56765.known	chr17	-	1005	7	FSM	ENSG00000091640.8	ENST00000206020.8	1005	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	77.3809120879016	6747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	-4954802	True	NA	-1	True	AATAAA	-16	NA	4967817	4959225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4959644_4959759_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_56766.known	chr17	-	1094	6	FSM	ENSG00000091640.8	ENST00000575142.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_2	81.958526097045	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGGTTTGTTTATACA	-4967778	False	NA	-1	True	AATAAA	-16	NA	4967790	4959225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4959917_4960021_4960112_4960233_4960319_4960458_4960548_4960785_4960854_4967719
transcript_56769.known	chr17	-	764	3	FSM	ENSG00000108509.21	ENST00000574442.1	764	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	9.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGCCTCGGTTCCCACCAC	-4969403	False	NA	NA	False	NA	NA	NA	4969415	4968396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4968820_4968906_4968982_4969149
transcript_56770.known	chr17	-	856	2	FSM	ENSG00000108509.21	ENST00000572192.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTAAGGCGCCGCGGGGA	-4969069	False	NA	NA	False	NA	NA	NA	4969081	4968138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_4968820_4968906
transcript_56771.nnic	chr17	-	1077	7	NIC	ENSG00000196388.8	novel	1383	8	NA	NA	17	0	intron_retention	FALSE	canonical	2	2	junction_6	2.92498812913071	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTTGTCTTTCTTCT	NA	False	NA	1	True	ATTAAA	-16	NA	4997593	4988129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_4988555_4988778_4988945_4989427_4989580_4989889_4989930_4990151_4990266_4994393_4994476_4997495
transcript_56773.nnic	chr17	-	1122	7	NIC	ENSG00000196388.8	novel	1383	8	NA	NA	17	0	intron_retention	FALSE	canonical	1	1	junction_3	3.2659863237109	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGAGTTGTCTTTCTTCT	NA	False	NA	1	True	ATTAAA	-16	NA	4997593	4988129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_4988555_4988778_4988945_4989427_4989625_4989889_4989930_4990151_4990266_4994393_4994476_4997495
transcript_56775.known	chr17	+	7917	23	FSM	ENSG00000129250.12	ENST00000320785.10	7917	23	0	0	0	0	multi-exon	TRUE	canonical	3	257	junction_1	41.5348106516422	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTCTCCACCAGTCTTA	4993672	True	NA	NA	False	AATAAA	-18	NA	4997949	5028401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_4998157_4999849_4999971_5000219_5000353_5000771_5000849_5001221_5001402_5002058_5002125_5002463_5002643_5002730_5002843_5003611_5003690_5003850_5003917_5003997_5004074_5004566_5004646_5004854_5005001_5006914_5007085_5007262_5007343_5007466_5007543_5013652_5013733_5014742_5014838_5019995_5020080_5020491_5020679_5020805_5020879_5022091_5022710_5023467
transcript_56777.known	chr17	-	2375	5	FSM	ENSG00000132517.15	ENST00000254853.10	2375	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATCTAGTGTGCAATTA	-5035404	True	NA	NA	False	ATTAAA	-17	NA	5035426	5032601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5033170_5033260_5033385_5033478_5034359_5034476_5034714_5034860
transcript_5678.nic	chr1	-	763	6	ISM	ENSG00000079277.22	ENST00000649800.1	2809	14	-10	17418	-10	0	5prime_fragment	FALSE	canonical	3	113	junction_2	31.7048892128643	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-46602520	True	NA	-1	True	AATAAA	-20	NA	46604304	46574825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112_46594281_46604184
transcript_56781.known	chr17	-	2179	5	FSM	ENSG00000167840.13	ENST00000250076.7	2179	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	52.083466666496	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGCTTTGGATGCAAGTA	-5122894	True	NA	-23	True	NA	NA	NA	5123102	5105634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111799_5112352_5122976
transcript_56795.known	chr17	-	1907	3	FSM	ENSG00000167840.13	ENST00000574735.1	1907	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	65.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTTTCCTGTGTCTTTCTT	NA	False	NA	-6	True	CATAAA	-19	NA	5112064	5105734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106534_5108925_5109769_5111799
transcript_56799.known	chr17	-	1610	4	FSM	ENSG00000167840.13	ENST00000575898.5	1610	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	35.311313893551	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGTTGTTGTTGTTT	-5109018	True	NA	71	True	NA	NA	NA	5111841	5105540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106507_5108925_5109053_5109393_5109869_5111799
transcript_56800.known	chr17	-	1553	5	FSM	ENSG00000167840.13	ENST00000573015.5	1553	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	21.821720830402	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGGACTGGATCCCATAAA	-5109022	True	NA	-44	True	NA	NA	NA	5111845	5105772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5106534_5108925_5109053_5109393_5109869_5111075_5111220_5111799
transcript_56801.known	chr17	+	452	3	FSM	ENSG00000234327.9	ENST00000665679.2	469	3	16	1	-15	-1	multi-exon	FALSE	canonical	3	93	junction_1	133.5	565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTTGAACATTCATTGCA	5109998	True	NA	9	True	AATAAA	-20	NA	5111941	5114382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5112102_5113385_5113453_5114157
transcript_56802.known	chr17	+	462	3	FSM	ENSG00000234327.9	ENST00000571138.5	462	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	180	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGTCTTTGAACATTCATT	NA	False	NA	6	True	AATAAA	-17	NA	5111467	5114379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5111641_5113385_5113453_5114157
transcript_56805.nic	chr17	+	565	4	ISM	ENSG00000261879.8	ENST00000667038.1	1058	6	-83	16513	0	-8395	5prime_fragment	FALSE	canonical	1	3	junction_2	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	5191788	True	NA	NA	False	AATAAA	-16	NA	5192006	5215248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_5192164_5209749_5209896_5214049_5214210_5215146
transcript_56806.nnic	chr17	+	419	3	ISM	ENSG00000261879.8	ENST00000573772.3	1041	5	0	32934	0	-8395	5prime_fragment	FALSE	canonical	1	4	junction_1	3.5	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGGAGCACACCTTCCTG	5191788	True	NA	NA	False	AATAAA	-16	NA	5192006	5215248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_5192164_5214049_5214210_5215146
transcript_56809.known	chr17	+	461	3	FSM	ENSG00000029725.17	ENST00000570487.1	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	138	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTTTGCTTCCTCCCTC	5332041	False	NA	5	True	AATAAA	-18	NA	5332054	5336689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5332153_5335183_5335345_5336487
transcript_56812.known	chr17	-	3611	17	FSM	ENSG00000108559.12	ENST00000573584.6	3611	17	0	0	0	0	multi-exon	TRUE	canonical	3	256	junction_1	68.6894904170208	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTATATGTTTCCTTTAT	-5416547	True	NA	-3	True	AATAAA	-17	NA	5419662	5384832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5386270_5386707_5386827_5386983_5387111_5387385_5387467_5387604_5387671_5387778_5387905_5388801_5388961_5391560_5391663_5394890_5394982_5399551_5399651_5404098_5404247_5405056_5405244_5408732_5408910_5410702_5410790_5414008_5414135_5416512_5416683_5419353
transcript_56826.known	chr17	-	2040	11	FSM	ENSG00000005100.13	ENST00000574023.1	2040	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	6.58483105326173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGTGCCTGACTTCCAGGA	-5463118	False	NA	NA	False	NA	NA	NA	5468829	5444097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5468570
transcript_56832.known	chr17	-	901	6	FSM	ENSG00000108561.8	ENST00000574444.5	901	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2773.61292180434	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAATTGGTTTATCTCCT	-5438766	False	NA	36	True	NA	NA	NA	5438778	5432800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438708
transcript_56833.known	chr17	-	1169	6	FSM	ENSG00000108561.8	ENST00000225698.8	1169	6	0	0	0	0	multi-exon	FALSE	canonical	3	6398	junction_4	383.96770697547	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGTTTGTCTTTTTCTAT	-5347187	True	NA	-25	True	CATAAA	-20	NA	5439155	5432776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5433165_5433292_5433416_5433668_5433768_5434872_5434967_5438122_5438274_5438841
transcript_56841.known	chr17	+	995	7	FSM	ENSG00000129197.15	ENST00000381209.8	995	7	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	205.091578460832	2699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAATTTAAATTTGGTATT	5406686	True	NA	27	True	AATAAA	-16	NA	5420181	5432877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5420292_5421295_5421467_5422768_5422830_5425970_5426083_5426235_5426300_5428070_5428212_5432541
transcript_56842.known	chr17	-	5535	12	FSM	ENSG00000005100.13	ENST00000225296.8	5535	12	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_6	5.39513095453011	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGATGTGTGTGGCTTGTT	-5463271	False	NA	-7	True	ATTAAA	-14	NA	5468982	5440916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5444514_5448808_5448896_5450202_5450407_5450806_5450935_5453579_5453669_5453820_5453981_5455159_5455272_5455996_5456183_5460938_5461110_5462318_5462547_5463528_5463690_5468570
transcript_5687.nic	chr1	-	578	4	ISM	ENSG00000079277.22	ENST00000528077.6	1557	11	-36	22047	-10	0	5prime_fragment	FALSE	canonical	3	127	junction_3	27.9324582201822	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-46602520	True	NA	0	True	AATAAA	-19	NA	46604304	46580439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604184
transcript_56877.known	chr17	-	4167	7	FSM	ENSG00000072849.11	ENST00000158771.9	4167	7	0	0	0	0	multi-exon	FALSE	canonical	3	728	junction_2	50.6557005676558	1201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTATCTGGTATTTTTAA	-5480609	True	NA	-2	True	AATAAA	-25	NA	5486178	5471253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_5688.nic	chr1	-	530	4	ISM	ENSG00000079277.22	ENST00000496619.6	738	8	-4	11984	-4	0	5prime_fragment	FALSE	canonical	3	47	junction_3	65.3044153688452	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-46602514	True	NA	0	True	AATAAA	-19	NA	46604298	46580439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_46580628_46583227_46583330_46594112_46594281_46604226
transcript_56882.known	chr17	-	657	7	FSM	ENSG00000072849.11	ENST00000570848.5	657	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	367.467307691749	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTGGACACTTTTG	-5480609	True	NA	NA	False	NA	NA	NA	5486178	5474609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5474790_5480053_5480145_5481100_5481143_5481295_5481390_5482808_5482883_5485150_5485217_5486068
transcript_5689.known	chr1	-	588	4	FSM	ENSG00000079277.22	ENST00000525888.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	59.1739432145227	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAGCTTCCATTTTAAA	-46602462	True	NA	NA	False	NA	NA	NA	46604246	46584546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46584804_46585873_46585975_46594112_46594281_46604184
transcript_56890.known	chr17	-	570	6	FSM	ENSG00000072849.11	ENST00000571476.5	570	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	305.134462163814	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGAGGCTTCGCCTGGGGTG	-5480579	True	NA	NA	False	NA	NA	NA	5486148	5474726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5474790_5480053_5480145_5480386_5480583_5482808_5482883_5485150_5485217_5486068
transcript_56904.known	chr17	+	945	4	FSM	ENSG00000167842.16	ENST00000576570.5	945	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	42.4264068711929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGCATTTCAAGACTAC	5486341	True	NA	NA	False	NA	NA	NA	5486384	5488935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486685_5487556_5487695_5488195_5488590_5488822
transcript_56908.known	chr17	-	589	4	FSM	ENSG00000072849.11	ENST00000572834.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	352.794872726663	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAACAAATATCCTGCCA	-5480593	True	NA	NA	False	NA	NA	NA	5486162	5474451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_5474790_5480053_5480145_5485150_5485217_5486068
transcript_56911.known	chr17	+	2502	3	FSM	ENSG00000167842.16	ENST00000611091.5	2502	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	12	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTGGTTTTTTATTTTC	5483823	True	NA	14	True	ATTAAA	-16	NA	5486565	5490811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486685_5488195_5488590_5488822
transcript_56915.known	chr17	+	2505	3	FSM	ENSG00000167842.16	ENST00000381165.3	2505	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTTTTATTTTCTGC	5486431	False	NA	17	True	ATTAAA	-19	NA	5486926	5490814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5487046_5488195_5488590_5488822
transcript_56920.known	chr17	+	551	2	FSM	ENSG00000167842.16	ENST00000576988.1	551	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGTACAAGACTGAATT	5486264	False	NA	NA	False	AAGAAA	-15	NA	5486284	5489237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486421_5488822
transcript_56922.known	chr17	+	2204	2	FSM	ENSG00000167842.16	ENST00000573759.1	2204	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACATGAAATATGTT	5486352	True	NA	-60	True	AATGAA	-24	NA	5486395	5490737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_5486685_5488822
transcript_56927.known	chr17	-	2894	6	FSM	ENSG00000129221.16	ENST00000381129.8	2894	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTGTAGGTGTGTT	-6435111	False	NA	NA	False	AATAAA	-16	NA	6435121	6423737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6428317_6428507_6433918_6434099_6435008
transcript_56928.known	chr17	-	2783	5	FSM	ENSG00000129221.16	ENST00000250087.9	2783	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGCTGTGTAGGTGTGTT	-6435189	False	NA	NA	False	AATAAA	-16	NA	6435199	6423737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6425831_6426614_6426757_6426880_6427058_6433918_6434099_6435008
transcript_56931.known	chr17	+	1908	6	FSM	ENSG00000129195.16	ENST00000572447.6	1908	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	272.919475303614	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATCTGTCACAGATAATAC	6436095	True	NA	5	True	AATAAA	-18	NA	6444454	6451469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450027_6450073_6450361
transcript_56932.known	chr17	+	1473	5	FSM	ENSG00000129195.16	ENST00000250056.12	1473	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	335.540887970453	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGTTCCCTTTCACCGG	6436081	True	NA	23	True	AATAAA	-17	NA	6444440	6451065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6444489_6445075_6445405_6447462_6447759_6449311_6449408_6450361
transcript_56934.known	chr17	-	447	2	FSM	ENSG00000198920.11	ENST00000570455.1	447	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTCTTATAAGAAATGGA	-6638416	True	NA	NA	False	AATGAA	-34	NA	6640652	6634740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6635172_6640636
transcript_56935.known	chr17	-	4647	19	FSM	ENSG00000198920.11	ENST00000361413.8	4647	19	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_18	11.3242065647438	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGAGCATTGCTCTCCGTG	-6638475	True	NA	-16	True	AATAAA	-24	NA	6640711	6578146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6579865_6589778_6590004_6590509_6590631_6594971_6595054_6596157_6596344_6599236_6599321_6600379_6600459_6606872_6606963_6607180_6607271_6608347_6608465_6609993_6610161_6611918_6612149_6620787_6620999_6622881_6623098_6623508_6623572_6624754_6624862_6628116_6628742_6635010_6635172_6640636
transcript_56944.known	chr17	+	518	4	FSM	ENSG00000129235.11	ENST00000577146.5	518	4	0	0	0	0	multi-exon	FALSE	canonical	2	111	junction_1	1524.0910588136	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTGGCATGTGTCTAAA	6641288	True	NA	17	True	AATAAA	-11	NA	6641307	6643119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641499_6641752_6641835_6642248_6642325_6642950
transcript_56946.known	chr17	+	505	4	FSM	ENSG00000129235.11	ENST00000573792.5	505	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1574.51163504399	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACTGGCATGTGTCTAAAC	6641446	False	NA	18	True	AATAAA	-12	NA	6641465	6643120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641643_6641752_6641835_6642248_6642325_6642950
transcript_56948.known	chr17	-	619	4	FSM	ENSG00000108590.11	ENST00000574128.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	52.8540968663315	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAATTGTTCTTTGATTT	-6651399	False	NA	-28	True	AATAGA	-15	NA	6651427	6644294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651348
transcript_56955.known	chr17	+	1917	4	FSM	ENSG00000129235.11	ENST00000250101.10	1917	4	0	0	0	0	multi-exon	FALSE	canonical	3	2916	junction_3	304.055185049615	18805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTGCCAATGTAGAATCT	6629726	True	NA	-47	True	NA	NA	NA	6641059	6644541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641228_6641752_6641835_6642248_6642325_6642950
transcript_56956.known	chr17	+	420	3	FSM	ENSG00000129235.11	ENST00000571029.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	2916	junction_2	365.5	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACTGGCATGTGTCTA	6641638	False	NA	15	True	AATAAA	-44	NA	6641657	6643117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641835_6642248_6642325_6642950
transcript_56957.known	chr17	+	459	4	FSM	ENSG00000129235.11	ENST00000570330.5	459	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1575.43736431789	4262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAACTGGCATGTGT	6629682	True	NA	12	True	AATAAA	-41	NA	6641015	6643114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641153_6641752_6641835_6642248_6642325_6642950
transcript_56958.known	chr17	+	391	4	FSM	ENSG00000129235.11	ENST00000576020.5	391	4	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	1506.06647337434	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAACTGTATACTTGCT	6640888	False	NA	-8	True	NA	NA	NA	6640984	6643067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641101_6641752_6641835_6642248_6642325_6642950
transcript_56959.known	chr17	+	616	4	FSM	ENSG00000129235.11	ENST00000574734.5	616	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1430.35753106231	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACTGGCATGTGTCT	6629700	True	NA	14	True	AATAAA	-43	NA	6641033	6643116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641228_6641752_6641933_6642248_6642325_6642950
transcript_5696.known	chr1	-	594	5	FSM	ENSG00000079277.22	ENST00000486716.5	594	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	33.6377763831083	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTTGATTTGGGAGA	-46592447	False	NA	-1	True	AATAAA	-20	NA	46594231	46574825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46575021_46576574_46576655_46580529_46580628_46583227_46583330_46594112
transcript_56960.known	chr17	+	392	3	FSM	ENSG00000129235.11	ENST00000571957.5	392	3	0	0	0	0	multi-exon	FALSE	canonical	3	3158	junction_1	244.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGTCAGAACTCTTTTAA	6629693	True	NA	NA	False	TTTAAA	-19	NA	6641026	6642357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6641228_6641752_6641835_6642248
transcript_56961.known	chr17	-	1629	4	FSM	ENSG00000108590.11	ENST00000225728.8	1629	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	20.8859335970941	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGAAGGTGTGCTCTGCA	-6649088	True	NA	NA	False	AATAAA	-22	NA	6651605	6643310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6644660_6649981_6650079_6650355_6650434_6651500
transcript_56962.known	chr17	-	593	3	FSM	ENSG00000108590.11	ENST00000575197.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	67	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCCCTGTGGATTTGTAA	-6649117	True	NA	-12	True	AATAGA	-31	NA	6651634	6644278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6644660_6650355_6650434_6651500
transcript_56967.nic	chr17	+	991	4	NIC	ENSG00000274114.2	novel	700	4	NA	NA	-78	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	0.942809041582063	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	6656751	False	NA	NA	False	AATAAA	-13	NA	6656955	6658491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657701_6657784_6657861_6657985_6658154
transcript_5697.known	chr1	-	464	3	FSM	ENSG00000079277.22	ENST00000465783.6	464	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	7	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAAGCTGTATTCACTG	-46592496	False	NA	6	True	AATAAA	-25	NA	46594280	46580433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46580628_46583227_46583330_46594112
transcript_56970.nic	chr17	+	1403	4	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-16	339	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	1.63299316185545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTTGCACTAAATAAT	6656957	True	NA	27	True	AATAAA	-39	NA	6657287	6693916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657701_6657784_6689875_6690028_6692864
transcript_56971.known	chr17	+	700	4	FSM	ENSG00000274114.2	ENST00000603173.6	700	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	3.29983164553722	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCTAGAATGATCTGAAT	6656973	True	NA	NA	False	AATAAA	-13	NA	6657303	6658491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6657405_6657644_6657784_6657861_6657985_6658154
transcript_56973.known	chr17	+	1009	4	FSM	ENSG00000274114.2	ENST00000634558.1	1009	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	1.24721912892465	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACACACACACACACACC	6656829	False	NA	NA	False	AAAAAG	-36	NA	6657033	6693211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6657405_6657644_6657784_6689875_6690028_6692864
transcript_56977.nnic	chr17	+	581	3	NIC	ENSG00000274114.2	novel	984	7	NA	NA	-11	-8267	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGTCTCTCATGTCT	6656962	True	NA	NA	False	AATAAA	-22	NA	6657292	6684944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657701_6657784_6684557
transcript_5698.known	chr1	-	540	4	FSM	ENSG00000079277.22	ENST00000474868.2	540	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	82.9832647117612	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGACTCTGAAGCTGTAT	-46592477	False	NA	0	True	AATAAA	-19	NA	46594261	46580439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46580628_46583227_46583330_46585873_46585975_46594112
transcript_56981.nic	chr17	+	877	3	ISM	ENSG00000274114.2	ENST00000603173.6	700	4	-2	-5	-2	5	intron_retention	FALSE	canonical	1	3	junction_2	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAATGATCTGAATGACTT	6656971	True	NA	NA	False	AATAAA	-18	NA	6657301	6658496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_6657405_6657644_6657784_6657861
transcript_56983.nnic	chr17	+	638	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-11	-8267	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGTCTCTCATGTCT	6656962	True	NA	NA	False	AATAAA	-22	NA	6657292	6684944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657644_6657784_6684557
transcript_56984.nnic	chr17	+	1308	3	NIC	ENSG00000274114.2	novel	1009	4	NA	NA	-16	339	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	0.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATTTTGCACTAAATAAT	6656957	True	NA	27	True	AATAAA	-39	NA	6657287	6693916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_6657405_6657644_6657784_6692864
transcript_5699.known	chr1	-	1760	9	FSM	ENSG00000123472.12	ENST00000574428.5	1760	9	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_4	89.0996632990271	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAATCCTGGTTTGCATG	-46662040	True	NA	-6	True	AATAAA	-19	NA	46668364	46635044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46635971_46643193_46643302_46645160_46645257_46652580_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_56990.known	chr17	-	573	4	FSM	ENSG00000215067.11	ENST00000575727.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.02768199119819	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAGGTCGAGCGTCTCAAC	-7012048	True	NA	NA	False	NA	NA	NA	7012349	6999398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6999587_7002483_7002621_7009795_7009890_7012195
transcript_56992.known	chr17	-	665	3	FSM	ENSG00000215067.11	ENST00000399541.6	665	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTCTGGTTTCACTGACT	-7012033	True	NA	NA	False	CATAAA	-22	NA	7012334	6985108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6985541_7009795_7009890_7012195
transcript_56993.known	chr17	-	557	3	FSM	ENSG00000215067.11	ENST00000571010.4	557	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTGGTGGGCGGTGA	-7012037	True	NA	NA	False	NA	NA	NA	7012338	6999309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_6999587_7002483_7002621_7012195
transcript_56996.known	chr17	-	1730	3	FSM	ENSG00000215067.11	ENST00000399540.2	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATACAAAAATTAGCC	-7012041	True	NA	NA	False	NA	NA	NA	7012342	7001131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7002621_7009795_7009890_7012195
transcript_56998.known	chr17	-	495	2	FSM	ENSG00000215067.11	ENST00000573939.1	495	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGCTGTTCTTCCTTGCCT	-7012048	True	NA	NA	False	NA	NA	NA	7012349	7002279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7002621_7012195
transcript_56999.known	chr17	-	1224	1	FSM	ENSG00000215067.11	ENST00000666062.1	1224	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTAGTTCTTGTCCATT	-7012515	False	NA	NA	False	AATAAA	-22	NA	7012530	7011306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7011300_7012500
transcript_57.known	ERCC-00113	+	825	1	FSM	ERCC-00113A	DQ883663	825	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35937	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00113_+_0_800
transcript_5700.known	chr1	-	535	6	FSM	ENSG00000123472.12	ENST00000474020.5	535	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	94.1985137887005	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTTAATAAAGATGC	-46668096	False	NA	NA	False	AATAAA	-41	NA	46668109	46652420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_46652629_46653816_46653868_46658126_46658190_46658686_46658738_46665255_46665365_46668056
transcript_57000.known	chr17	+	2392	14	FSM	ENSG00000108839.12	ENST00000251535.11	2392	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	3.9102353929658	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGTAGTCTTCTTTTGGT	6995816	True	NA	22	True	AATAAA	-35	NA	6996048	7010754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_6996253_6996825_6997028_6998508_6998591_6998714_6998838_6998952_6999057_6999305_6999467_7000335_7000480_7001601_7001812_7005256_7005344_7005857_7006028_7006485_7006608_7009746_7009848_7009955_7010127_7010243
transcript_57010.known	chr17	+	783	4	FSM	ENSG00000219200.12	ENST00000549393.2	783	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	640.056768315645	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTCTCTTCAGCCCTGT	7001484	True	NA	27	True	AATAAA	-6	NA	7012647	7014519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012762_7013318_7013536_7013665_7013743_7014144
transcript_57019.known	chr17	+	425	3	FSM	ENSG00000219200.12	ENST00000570898.1	425	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	689.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCCTGCACCGTGTCACC	7001458	True	NA	NA	False	TTTAAA	-2	NA	7012621	7014330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012762_7013643_7013743_7014144
transcript_5702.known	chr1	+	2256	12	FSM	ENSG00000186377.8	ENST00000371901.4	2256	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_11	1.92847303959967	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCTTTATGGTATTCT	47023596	True	NA	4	True	AATAAA	-19	NA	47023668	47050751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_47023995_47029989_47030132_47031435_47031481_47033240_47033369_47035805_47035934_47036016_47036172_47038659_47038767_47039341_47039533_47046466_47046601_47048564_47048630_47049421_47049505_47049999
transcript_57024.known	chr17	-	770	3	FSM	ENSG00000267532.5	ENST00000443997.1	770	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCCCTCAGCATCTCT	NA	False	NA	NA	False	NA	NA	NA	7019630	7015817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7016015_7017068_7017389_7019377
transcript_57026.known	chr17	+	1023	3	FSM	ENSG00000108839.12	ENST00000406228.1	1023	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGAATGTTACATCACA	NA	False	NA	4	True	AATAAA	-17	NA	7009488	7010736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7009848_7009955_7010127_7010243
transcript_57027.known	chr17	+	1485	2	FSM	ENSG00000219200.12	ENST00000552176.2	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	1379	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGTGTCTGTGCTTGAG	7001482	True	NA	40	True	AATAAA	-19	NA	7012645	7014532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7013743_7014144
transcript_57028.known	chr17	+	1856	7	FSM	ENSG00000161939.19	ENST00000549775.5	1856	7	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_3	315.435545449991	6167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGATTTCCCTCTCAGC	7001471	True	NA	0	True	AAAACA	-1	NA	7012634	7017502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012762_7013665_7013743_7014144_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_57029.known	chr17	+	595	3	FSM	ENSG00000219200.12	ENST00000552842.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	689.5	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCCTGTGTCTGTGCTTG	7001482	True	NA	38	True	AATAAA	-17	NA	7012645	7014530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012778_7013665_7013743_7014144
transcript_5703.known	chr1	+	661	2	FSM	ENSG00000224805.2	ENST00000429328.2	661	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGAGTATGACGGCAGTA	NA	False	NA	NA	False	AATAAA	-25	NA	47179249	47180339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_47179439_47179867
transcript_57030.known	chr17	+	1662	8	FSM	ENSG00000161939.19	ENST00000547863.5	1662	8	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	312.408549884308	5457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001496	False	NA	18	True	AATAAA	-14	NA	7012659	7017520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7012758_7013665_7013743_7014144_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_57031.known	chr17	+	739	3	FSM	ENSG00000219200.12	ENST00000552321.2	739	3	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_1	649.5	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCTCTTCAGCCCTGTG	7013151	False	NA	28	True	AATAAA	-7	NA	7013230	7014520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7013517_7013665_7013743_7014144
transcript_57032.known	chr17	+	760	5	FSM	ENSG00000258315.5	ENST00000552402.5	760	5	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	274.536427455447	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCGTGCTGTCTGCTTA	7001902	True	NA	17	True	AATAAA	-13	NA	7014768	7017519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7015157_7016494_7016686_7016909_7017015_7017260
transcript_57033.known	chr17	+	764	5	FSM	ENSG00000258315.5	ENST00000546760.5	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	287.05661462506	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATTTCCCTCTCAGCTTCG	7001886	True	NA	4	True	AAAACA	-5	NA	7014752	7017506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7017256
transcript_57034.known	chr17	+	779	5	FSM	ENSG00000258315.5	ENST00000552775.1	779	5	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	207.092370694818	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7002173	False	NA	18	True	AATAAA	-14	NA	7015039	7017520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017256
transcript_57035.known	chr17	+	850	6	FSM	ENSG00000258315.5	ENST00000439424.6	850	6	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	91.3993435425003	4889	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTGCTGTCTGCTTAA	7001915	True	NA	18	True	AATAAA	-14	NA	7014781	7017520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7015157_7015773_7015876_7016494_7016686_7016909_7017015_7017260
transcript_57036.known	chr17	+	2343	3	FSM	ENSG00000258315.5	ENST00000549857.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_2	86.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGTCTGCTTAACATTA	7001887	True	NA	23	True	AATAAA	-19	NA	7014753	7017525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7014879_7015061_7017015_7017260
transcript_57037.known	chr17	+	430	4	FSM	ENSG00000258315.5	ENST00000547747.1	430	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	311.000893174852	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTGCTGTCTGCTTAAC	7015793	False	NA	19	True	AATAAA	-15	NA	7015842	7017521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7015876_7016494_7016526_7016909_7017015_7017260
transcript_57038.known	chr17	+	3527	9	FSM	ENSG00000161940.11	ENST00000293805.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	4.9749371855331	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTGTGTCCTGGGTTCT	7022864	True	NA	23	True	AATAAA	-18	NA	7023049	7029644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7023100_7023659_7023851_7024082_7024305_7024400_7024764_7025075_7025201_7026456_7026622_7026704_7026836_7026949_7027088_7027502
transcript_57041.known	chr17	+	1804	4	FSM	ENSG00000174327.7	ENST00000308027.7	1804	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.24721912892465	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGTTGAGGACTCT	7035684	True	NA	NA	False	GGGGCT	-25	NA	7036014	7040117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7036582_7036726_7036871_7038151_7038890_7039762
transcript_57044.nic	chr17	-	1218	3	ISM	ENSG00000174326.15	ENST00000574600.3	1726	5	1001	0	515	0	3prime_fragment	FALSE	canonical	2	3	junction_1	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAACTGTTCACCAATC	-7043035	False	NA	-16	True	AATAAA	-26	NA	7043091	7041620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_7041909_7041995_7042764_7042929
transcript_57045.known	chr17	-	927	2	FSM	ENSG00000174326.15	ENST00000573338.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCCCCAATAAAGAATTTT	NA	False	NA	-54	True	NA	NA	NA	7043606	7041658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7041909_7042929
transcript_57048.known	chr17	-	944	8	FSM	ENSG00000141505.12	ENST00000380920.8	944	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	10.7797997028077	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGGGAAGGATAGGGTGA	-7177942	False	NA	NA	False	NA	NA	NA	7178116	7173552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178084
transcript_57049.nnic	chr17	-	1101	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	10.4939243841183	521	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	NA	False	NA	-5	True	AGTAAA	-17	NA	7178194	7173430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7176980_7177077_7177209_7177327_7178127
transcript_5705.known	chr1	+	2937	6	FSM	ENSG00000162368.14	ENST00000371873.10	2937	6	0	0	0	0	multi-exon	FALSE	canonical	3	334	junction_5	31.9274176844918	238	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTGGTTTAGATTTCTG	47328781	True	NA	29	True	AATAAA	-23	NA	47333789	47378839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_47334117_47368468_47368616_47372954_47373108_47374908_47374986_47375196_47375294_47376703
transcript_57051.nnic	chr17	-	1079	8	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	13.0274435602034	237	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	NA	False	NA	-5	True	AGTAAA	-17	NA	7178194	7173430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176829_7176902_7177002_7177077_7177209_7177327_7178127
transcript_57054.nnic	chr17	-	1029	7	NNC	ENSG00000141505.12	novel	1310	9	NA	NA	-78	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	13.7921072437181	236	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTTAGTTGTCTGGT	NA	False	NA	-5	True	AGTAAA	-17	NA	7178194	7173430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_7173834_7173960_7174068_7174137_7174290_7174373_7174461_7176980_7177077_7177209_7177327_7178127
transcript_57064.known	chr17	+	1732	1	FSM	ENSG00000072778.20	ENST00000578711.1	1732	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCGCAAATAATAAAAATTTC	7223493	False	NA	-15	True	NA	NA	NA	7223504	7225236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7223500_7225200
transcript_57065.known	chr17	+	709	5	FSM	ENSG00000072778.20	ENST00000578809.5	709	5	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_1	71.3897751782424	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGCTCCTGTGTGACG	7224205	False	NA	15	True	AATAAA	-17	NA	7224216	7225266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7224394_7224479_7224553_7224641_7224715_7224808_7224885_7224956
transcript_57066.known	chr17	-	2659	15	FSM	ENSG00000004975.12	ENST00000575458.5	2659	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	114.39728928571	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAGACAGCAGCCTGAGGA	-7210170	False	NA	-61	True	NA	NA	NA	7234318	7225454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7226314_7226420_7226640_7227089_7227270_7227403_7227536_7227654_7227784_7227976_7228045_7228968_7229046_7229134_7229275_7229377_7229448_7229587_7229679_7229807_7229944_7230045_7230138_7230284_7230431_7230727_7230798_7234068
transcript_5707.known	chr1	-	2297	13	FSM	ENSG00000132122.12	ENST00000371843.7	2297	13	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	10.4642247682282	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGAACCACAATGTGA	-48471965	False	NA	NA	False	TTTAAA	-9	NA	48472010	48297836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48298894_48305786_48305879_48355717_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_5708.known	chr1	-	5003	13	FSM	ENSG00000132122.12	ENST00000371847.8	5003	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.87724932372385	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTTTGTTTATCCATT	-48471559	True	NA	NA	False	AATATA	-1	NA	48472204	48295372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48298894_48305786_48305879_48355669_48355770_48359585_48359771_48385308_48385350_48395266_48395355_48399350_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48451551_48451601_48452993_48453132_48471957
transcript_57082.known	chr17	-	1768	5	FSM	ENSG00000040633.13	ENST00000571362.5	1768	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	232.270316657123	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCACTGTCCTGCTCG	-7239429	False	24148	-22	True	AATAAA	-26	NA	7239439	7235028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236567_7237384_7237478_7237628_7237661_7239245
transcript_57090.known	chr17	-	1978	5	FSM	ENSG00000040633.13	ENST00000320316.8	1978	5	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_4	77.7383431776109	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-7239447	False	24148	-31	True	AATAAA	-17	NA	7239457	7235037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7239245
transcript_57103.known	chr17	-	1944	4	FSM	ENSG00000040633.13	ENST00000576955.5	1944	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	276.241842514047	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTATAGCCCTCACTG	-7239445	False	24148	-31	True	AATAAA	-17	NA	7239455	7235037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7239245
transcript_57110.known	chr17	-	1662	5	FSM	ENSG00000040633.13	ENST00000454255.6	1662	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	262.314100840957	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACTCCCCTCCCTCATCT	-7238920	False	NA	-27	True	TATAAA	-18	NA	7238930	7235286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7235841_7235929_7236768_7237384_7237478_7237628_7237661_7238785
transcript_57112.known	chr17	+	1304	9	FSM	ENSG00000170291.16	ENST00000354429.7	1522	9	252	-34	-3	0	multi-exon	FALSE	canonical	3	59	junction_1	433.064083017745	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGAAGTACTTTGGTA	7251761	True	NA	NA	False	AATAAA	-19	NA	7252052	7259931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_57113.known	chr17	+	1389	9	FSM	ENSG00000170291.16	ENST00000396627.7	1389	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	437.872966024394	780	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7252031	False	NA	NA	False	AATAAA	-28	NA	7252231	7259940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252338_7252425_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_57115.known	chr17	-	1767	8	FSM	ENSG00000175826.12	ENST00000574322.6	1767	8	0	0	0	0	multi-exon	FALSE	canonical	3	573	junction_4	46.9298216837152	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTTAGGTCCTTCTCT	-7251724	False	NA	-5	True	TTTAAA	-27	NA	7251734	7243590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194
transcript_57126.known	chr17	+	671	5	FSM	ENSG00000170291.16	ENST00000574255.6	671	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	424.850561962674	7867	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCATTTTTTTGACTTTTT	7251764	True	NA	37	True	AATAAA	-27	NA	7252055	7254913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252083_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_57127.known	chr17	+	473	5	FSM	ENSG00000170291.16	ENST00000570500.6	473	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	447.022370804863	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGGCCTTTCCTGGGGGGC	7252036	False	NA	NA	False	NA	NA	NA	7252236	7254633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252346_7252425_7252597_7252769_7252831_7252917_7252999_7254582
transcript_57131.known	chr17	-	605	5	FSM	ENSG00000181885.18	ENST00000575313.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_4	525.585863584629	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATCCTGGGAGGTGCAC	-7262599	True	NA	NA	False	NA	NA	NA	7263200	7260488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262086_7263158
transcript_57134.known	chr17	-	1228	5	FSM	ENSG00000181885.18	ENST00000397317.8	1228	5	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	507.919961706567	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTTCCCTTCAGGG	-7262612	True	NA	-40	True	AATAAA	-19	NA	7263213	7260136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820_7262344_7263158
transcript_57147.known	chr17	-	568	4	FSM	ENSG00000170296.10	ENST00000571129.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_3	914.300096613069	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATCCTGCTGTAGACTTC	-7241966	False	NA	NA	False	NA	NA	NA	7242156	7240627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242078
transcript_5715.known	chr1	-	1038	6	FSM	ENSG00000132122.12	ENST00000463938.5	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	14.5684590811795	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTGACATTAGTACTAAAAT	-48471971	False	645	NA	False	AATAGA	-36	NA	48472016	48399051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48399645_48403801_48403883_48411463_48411589_48413109_48413152_48452993_48453132_48471957
transcript_57160.known	chr17	-	583	3	FSM	ENSG00000170296.10	ENST00000570856.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_2	1005.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTCTGTTCCCTTTC	-7218210	True	NA	NA	False	NA	NA	NA	7242358	7240573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7242240
transcript_57162.known	chr17	-	1319	4	FSM	ENSG00000170296.10	ENST00000302386.10	1319	4	0	0	0	0	multi-exon	FALSE	canonical	3	1594	junction_3	182.410404186701	7658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCACTTGGCTAGACTTTT	-7218301	True	NA	NA	False	AGTAAA	-20	NA	7242449	7240007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7242240
transcript_57163.known	chr17	+	687	4	FSM	ENSG00000170291.16	ENST00000573657.6	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_1	87.7319148821504	4475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTTTTTCATTTTTTTG	7251791	False	NA	30	True	AATAAA	-20	NA	7252375	7254906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582
transcript_57164.known	chr17	-	762	4	FSM	ENSG00000170296.10	ENST00000577035.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	863.472446964387	1495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTTGCTCCCCTCGTC	-7240718	False	24148	5	True	AATAAA	-32	NA	7241819	7240407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7240920_7241341_7241461_7241600_7241680_7241767
transcript_57165.known	chr17	+	1423	8	FSM	ENSG00000170291.16	ENST00000396628.7	1491	8	71	-3	0	0	multi-exon	FALSE	canonical	3	132	junction_7	431.921241875962	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7251701	True	NA	NA	False	AATAAA	-28	NA	7252285	7259940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7258825_7258927_7259570
transcript_57166.known	chr17	-	1549	9	FSM	ENSG00000175826.12	ENST00000318988.10	1549	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	215.794462394196	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTGTTGTGATTTGATTT	-7247171	True	NA	-16	True	NA	NA	NA	7251961	7243838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7244246_7244550_7244636_7246025_7246138_7246253_7246371_7246790_7246863_7247063_7247183_7247276_7247344_7251194_7251602_7251798
transcript_57167.known	chr17	-	1542	4	FSM	ENSG00000181885.18	ENST00000360325.11	1542	4	0	0	0	0	multi-exon	FALSE	canonical	3	1149	junction_3	59.2002252247968	3891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGGGTGTTCTACTCTCTC	-7245196	True	NA	-30	True	AATAAA	-24	NA	7262478	7259902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820_7260986_7261820
transcript_57168.known	chr17	+	1083	7	FSM	ENSG00000170291.16	ENST00000570322.6	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	458.592653912186	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACTTTGGTAGCTATTTAA	7245170	True	NA	NA	False	AATAAA	-28	NA	7252524	7259940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252597_7252769_7252831_7252917_7252999_7254582_7254804_7256856_7257039_7258587_7258684_7259570
transcript_57169.known	chr17	+	510	3	FSM	ENSG00000170291.16	ENST00000574841.2	510	3	0	0	0	0	multi-exon	FALSE	canonical	3	1013	junction_2	62	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGACCCCTCCTTCATTG	7252600	False	NA	-73	True	NA	NA	NA	7252622	7254803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7252831_7252917_7252999_7254582
transcript_57170.known	chr17	-	485	3	FSM	ENSG00000181885.18	ENST00000574070.5	485	3	0	0	0	0	multi-exon	FALSE	canonical	3	1264	junction_2	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTCCTGTCCTGGGAATG	-7261110	False	44	NA	False	NA	NA	NA	7261145	7260461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7260537_7260641_7260727_7260820
transcript_57171.known	chr17	+	1768	10	FSM	ENSG00000181856.15	ENST00000571308.5	1768	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	1.03040205505508	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTGCATTAATACTACAA	7281309	False	NA	-9	True	AATAAA	-8	NA	7281735	7286151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7281968_7283244_7283362_7283472_7283646_7283737_7283863_7283973_7284090_7284216_7284380_7284484_7284673_7284834_7284940_7285087_7285190_7285704
transcript_57175.nic	chr17	-	1311	9	NIC	ENSG00000006047.13	novel	1654	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_8	38.6999677002449	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCTGTGGTCTTGGTCTC	-7293423	True	NA	-18	True	AGTAAA	-14	NA	7294634	7288262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_7288644_7288748_7288839_7289529_7289726_7289967_7290072_7290250_7290536_7291092_7291183_7292025_7292060_7293474_7293539_7294567
transcript_57182.known	chr17	-	1176	11	FSM	ENSG00000132522.16	ENST00000380728.7	1176	11	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_10	161.519070081523	602	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGGCTGCTGCTGTTTG	-7310197	True	NA	-6	True	AATAAA	-16	NA	7315360	7312660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7312840_7313028_7313125_7313211_7313292_7313379_7313470_7313567_7313722_7313905_7313989_7314079_7314160_7314290_7314404_7314487_7314598_7314958_7315120_7315330
transcript_57206.known	chr17	+	1256	6	FSM	ENSG00000132507.18	ENST00000336452.11	1256	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1582.7940611463	6689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7305682	True	NA	-34	True	AATAAA	-28	NA	7306998	7312463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7307116_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_57213.known	chr17	+	1271	6	FSM	ENSG00000132507.18	ENST00000419711.6	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	1355.76065734332	7012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7299945	True	NA	-42	True	AATAAA	-20	NA	7307973	7312455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7308114_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_5722.known	chr1	-	1693	6	FSM	ENSG00000162373.13	ENST00000371833.4	1693	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	13.7025545063685	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATAGTCTTTATCCTCATTT	-48776874	False	NA	NA	False	AATAAA	-23	NA	48776891	48727518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48761336_48761471_48776605
transcript_57229.known	chr17	+	1264	6	FSM	ENSG00000132507.18	ENST00000336458.13	1264	6	0	0	0	0	multi-exon	FALSE	canonical	3	3346	junction_1	260.314117942151	15554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCTGCTTATTTGAATT	7104202	True	NA	-34	True	AATAAA	-28	NA	7307627	7312463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7307753_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_5723.known	chr1	-	1465	6	FSM	ENSG00000162373.13	ENST00000463562.1	1465	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	20.8844439715306	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAAGCTTTCGTGTTTTCCTT	-48776915	False	NA	NA	False	AATAAA	-16	NA	48776932	48727869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759367_48761336_48761471_48776605
transcript_57230.known	chr17	+	1336	6	FSM	ENSG00000132507.18	ENST00000416016.2	1336	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	1572.00089058499	6825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCCAACTCAGCTGCTTA	7306544	True	NA	-42	True	AATAAA	-20	NA	7308370	7312455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7308576_7309614_7309801_7311017_7311123_7311349_7311482_7311577_7311652_7311821
transcript_57232.known	chr17	+	2511	22	FSM	ENSG00000072818.12	ENST00000158762.8	2511	22	0	0	0	0	multi-exon	TRUE	canonical	3	96	junction_1	18.405855323893	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7335141	True	NA	21	True	ATTAAA	-21	NA	7336528	7351477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415_7342475_7343378_7343563_7343705_7343751_7343860_7343957_7344048_7344124_7344538_7344649_7346243_7346296_7346390_7346492_7346807_7346932_7347030_7347243_7347921_7347992_7348126_7348222_7348305_7348476_7348994_7349168_7349944_7350055_7350126_7350238_7350949_7351000_7351294
transcript_57243.known	chr17	+	761	5	FSM	ENSG00000072818.12	ENST00000576628.1	761	5	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	10.5237825899246	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTAGCCGGGCATGGT	7335209	True	NA	NA	False	ACTAAA	-14	NA	7336596	7342753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7336788_7337311_7337370_7341947_7342068_7342274_7342329_7342415
transcript_57249.known	chr17	+	274	3	FSM	ENSG00000072818.12	ENST00000570504.5	274	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	83	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7350372	False	NA	21	True	ATTAAA	-21	NA	7350389	7351477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7350431_7350949_7351000_7351294
transcript_57250.nnic	chr17	+	323	3	NNC	ENSG00000072818.12	novel	274	3	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	83	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	NA	False	NA	21	True	ATTAAA	-21	NA	7350328	7351477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_7350419_7350949_7351000_7351294
transcript_57251.known	chr17	+	320	3	FSM	ENSG00000072818.12	ENST00000571471.5	320	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	81	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCTGGTTCACTTCTTG	NA	False	NA	20	True	ATTAAA	-20	NA	7350316	7351476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7350405_7350949_7351000_7351294
transcript_57252.known	chr17	+	412	3	FSM	ENSG00000072818.12	ENST00000574499.1	412	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	82	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGGTTCACTTCTTGG	7350403	False	NA	21	True	ATTAAA	-21	NA	7350420	7351477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7350600_7350949_7351000_7351294
transcript_57258.known	chr17	-	2032	8	FSM	ENSG00000187838.17	ENST00000574401.5	2032	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_7	75.4878014202646	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAGATGTATGTAATAG	-7386253	False	NA	-6	True	TATAAA	-20	NA	7394807	7389732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393143_7393365_7393466_7393510_7393600_7393837_7394103_7394272_7394476
transcript_57267.known	chr17	-	1740	7	FSM	ENSG00000187838.17	ENST00000573070.5	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	98.2554776533547	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTATGTAATAGGGGAGG	-7386288	False	75	0	True	TATAAA	-26	NA	7394842	7389726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7393837_7394103_7394160_7394476
transcript_5727.nnic	chr1	-	1178	5	NIC	ENSG00000162373.13	novel	1693	6	NA	NA	33	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_4	26.0708170182678	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCGTGTTTTCCTTGTG	-48776606	True	NA	NA	False	AATAAA	-19	NA	48776858	48727866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_48728044_48736238_48736453_48742622_48742772_48758899_48759285_48776605
transcript_57272.known	chr17	-	1672	6	FSM	ENSG00000187838.17	ENST00000575543.5	1672	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	105.01504654096	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGAAAGATGTATGTAAT	-7385961	False	NA	-8	True	TATAAA	-18	NA	7394515	7389734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7390442_7390633_7390796_7392790_7392953_7393466_7393510_7393600_7394160_7394476
transcript_57282.known	chr17	-	581	5	FSM	ENSG00000187838.17	ENST00000573213.1	581	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	85.0804766089142	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTCTCCATCCAGGATGC	-7385991	False	8554	NA	False	NA	NA	NA	7394545	7392883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7392953_7393466_7393510_7393600_7393837_7394103_7394268_7394476
transcript_57291.known	chr17	-	446	4	FSM	ENSG00000205544.4	ENST00000302422.4	446	4	0	0	0	0	multi-exon	FALSE	canonical	3	1230	junction_3	29.5334085777823	14749	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGAGTCTTTGTTCATC	-7395543	True	NA	-23	True	AATAAA	-1	NA	7404097	7402974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7403210_7403309_7403391_7403657_7403690_7403999
transcript_57292.known	chr17	+	2560	11	FSM	ENSG00000170175.11	ENST00000306071.7	2560	11	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	37.7380444644393	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCATTGGTAATGAGAA	7444767	True	NA	14	True	ATTAAA	-18	NA	7445060	7457710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_57293.nic	chr17	+	2308	10	NIC	ENSG00000170175.11	novel	2560	11	NA	NA	-55	-97	combination_of_known_junctions	TRUE	canonical	3	27	junction_6	45.72488854113	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7444228	False	NA	23	True	AATAAA	-32	NA	7445005	7457613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7445186_7445269_7445410_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_57294.known	chr17	+	1623	10	FSM	ENSG00000170175.11	ENST00000536404.6	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	14.5381575411521	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGATCTTGAAGAAGCTC	7444933	True	NA	NA	False	NA	NA	NA	7445502	7456926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7448578_7448789_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_57295.nic	chr17	+	2115	9	NIC	ENSG00000170175.11	novel	1623	10	NA	NA	-15	-97	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	33.6616900199619	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGGGTCTTGTGGTCGTT	7444918	True	NA	23	True	AATAAA	-32	NA	7445487	7457613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7445615_7446068_7446114_7446832_7446943_7447042_7447152_7447502_7447651_7454296_7454521_7455283_7455457_7455793_7455942_7456582
transcript_57298.known	chr17	+	928	5	FSM	ENSG00000161958.11	ENST00000575235.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	30.8463936303744	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTTGGGCCTAGGAGG	7437647	True	NA	NA	False	GGGGCT	-32	NA	7438272	7443331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7438531_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_57299.known	chr17	+	2315	5	FSM	ENSG00000161958.11	ENST00000575082.5	2315	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	26.8374738006393	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTTCTCAATTAAAGACG	7439965	True	NA	-15	True	NA	NA	NA	7440742	7444902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7440817_7441470_7441582_7441775_7441880_7442593_7442793_7443075
transcript_5730.nic	chr1	-	1197	5	NIC	ENSG00000162373.13	novel	1693	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	18.5522909636519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCGTGTTTTCCTTGTG	-48776875	False	NA	NA	False	AATAAA	-19	NA	48776892	48727866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_48728044_48736238_48736453_48758899_48759285_48761336_48761471_48776605
transcript_57303.known	chr17	+	1095	2	FSM	ENSG00000170175.11	ENST00000575379.1	1095	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTTGTTCACTGCAGCA	7455564	True	NA	NA	False	NA	NA	NA	7455593	7457329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7455942_7456582
transcript_57304.known	chr17	-	5956	4	FSM	ENSG00000174282.12	ENST00000311403.4	5956	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	18.8325958557674	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGATGCCAGGTGCAATT	-7484102	True	NA	-5	True	AATAAA	-30	NA	7484263	7459365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7463891_7465710_7466811_7467256_7467328_7484003
transcript_57308.known	chr17	+	1377	7	FSM	ENSG00000239697.11	ENST00000293825.11	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.18544972870135	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCATAGTCTCTCTCTT	7548510	True	NA	NA	False	ATTAAA	-6	NA	7549057	7557881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7549313_7549473_7549522_7550119_7550196_7550798_7550853_7550942_7550979_7556777_7556903_7557098
transcript_5731.nic	chr1	-	1279	5	NIC	ENSG00000162373.13	novel	1465	6	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	22.0567450001128	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCGTGTTTTCCTTGTG	-48776875	False	NA	NA	False	AATAAA	-19	NA	48776892	48727866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_48728044_48736238_48736453_48758899_48759367_48761336_48761471_48776605
transcript_57311.nic	chr17	+	1709	7	NIC	ENSG00000161955.17	novel	1593	7	NA	NA	-132	0	intron_retention	TRUE	canonical	2	5	junction_1	5.22812904711937	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCTCCATTTCCCCCA	7558148	False	NA	10	True	AATAAA	-16	NA	7558159	7561601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_7558376_7559067_7559298_7559623_7559703_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_57318.known	chr17	+	959	5	FSM	ENSG00000161955.17	ENST00000483039.5	959	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.62807315119618	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCCATCTATCGGACCCC	7558280	False	NA	NA	False	NA	NA	NA	7558291	7561292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7558376_7559845_7559894_7560048_7560168_7560349_7560489_7560723
transcript_57327.known	chr17	+	2567	11	FSM	ENSG00000161956.13	ENST00000321337.12	2567	11	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	28.2851551171281	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGTCTTCCTTAAGGG	7557674	True	NA	14	True	AATAAA	-22	NA	7561918	7571969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7562264_7563065_7563792_7564624_7564865_7564958_7565071_7565439_7565588_7565716_7565765_7566926_7567005_7570355_7570494_7570680_7570765_7570882_7570934_7571372
transcript_5733.known	chr1	+	1653	7	FSM	ENSG00000162374.18	ENST00000448907.7	1653	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	2.75378527364305	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAACAAAAAAAATAATA	50047881	True	NA	NA	False	AAGAAA	-4	NA	50048013	50201570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_50048183_50144956_50145198_50177088_50177193_50193764_50193919_50195560_50195787_50197428_50197468_50200850
transcript_5735.known	chr1	-	6821	19	FSM	ENSG00000185104.21	ENST00000396153.7	6821	19	0	0	0	0	multi-exon	TRUE	canonical	3	297	junction_9	28.2427746687122	107	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCAGTCTATAAACTCT	-50956688	True	NA	-3	True	AATAAA	-17	NA	50960267	50437027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_50441524_50475463_50475680_50490587_50490666_50491720_50491802_50535368_50535458_50539591_50539729_50567076_50567232_50582617_50582700_50583651_50583716_50584684_50584812_50596120_50596217_50655441_50655529_50705785_50705892_50738862_50738955_50744683_50744776_50787999_50788206_50801630_50801678_50857928_50857998_50959766
transcript_57359.known	chr17	+	1705	6	FSM	ENSG00000129226.14	ENST00000250092.11	1705	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.46969384566991	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCCTTTCTATGCCTTCC	7579591	False	NA	NA	False	ATTAAA	-20	NA	7579637	7582111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7579727_7579809_7580328_7580465_7580586_7580710_7580784_7580895_7581067_7581377
transcript_57372.known	chr17	+	900	5	FSM	ENSG00000129255.16	ENST00000574558.1	900	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	178.353581405028	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACGGCAGAGTGGAGGGACTG	7579922	False	NA	NA	False	NA	NA	NA	7583894	7587938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_57380.known	chr17	-	2987	17	FSM	ENSG00000129245.12	ENST00000250113.12	2987	17	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_8	21.9237848865108	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGGCTCCTGTGCCTTC	-7613731	True	NA	-1	True	AATAAA	-15	NA	7614897	7591229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7591926_7592253_7592355_7592503_7592600_7592693_7592895_7592983_7593182_7593402_7593626_7593917_7594005_7594237_7594348_7594678_7594758_7595823_7595995_7601408_7601526_7602908_7603003_7603756_7603906_7604008_7604081_7605644_7605739_7606096_7606150_7614451
transcript_57392.known	chr17	-	1050	3	FSM	ENSG00000129194.8	ENST00000538513.6	1050	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	80	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7590055	False	NA	-5	True	ATTAAA	-19	NA	7590072	7588177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7588547_7589143_7589739_7589986
transcript_57393.known	chr17	-	535	3	FSM	ENSG00000141504.12	ENST00000576579.5	535	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	169	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTGGTGTTGGGTCTT	-7623333	False	4146	-6	True	AATAAA	-16	NA	7627479	7626237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7627362
transcript_57397.known	chr17	-	352	2	FSM	ENSG00000233223.4	ENST00000415124.1	352	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTATCTCATATTTATTTAT	-7584055	False	NA	3	True	AATAAA	-28	NA	7584072	7581963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582161_7583917
transcript_57399.known	chr17	-	679	2	FSM	ENSG00000233223.4	ENST00000690435.1	1442	2	259	504	12	-497	multi-exon	FALSE	canonical	3	10	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGGTGGACAGGACAGGA	-7583501	False	199	NA	False	NA	NA	NA	7583518	7582471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582532_7582899
transcript_57402.known	chr17	-	725	2	FSM	ENSG00000233223.4	ENST00000655859.2	745	2	12	8	12	-1	multi-exon	FALSE	canonical	3	12	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCCGACTGCATTATCTC	-7584069	False	1646	-9	True	AATAAA	-16	NA	7584086	7581975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582532_7583917
transcript_57403.known	chr17	-	287	2	FSM	ENSG00000233223.4	ENST00000572046.2	1058	2	732	39	520	-37	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTTCGTCACATTTAATAA	-7581364	False	NA	-45	True	CATAAA	-35	NA	7583010	7582011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7582164_7582875
transcript_57405.known	chr17	-	1320	2	FSM	ENSG00000129194.8	ENST00000250055.3	1320	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTCCAGTCTTTATT	-7588448	True	NA	-5	True	ATTAAA	-19	NA	7590094	7588177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7588547_7589143
transcript_57406.known	chr17	+	728	1	FSM	ENSG00000129255.16	ENST00000582151.1	728	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAACCTTTATTAGATCG	7583482	False	NA	NA	False	AATAAA	-16	NA	7583528	7584256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583500_7584300
transcript_57407.known	chr17	-	1563	1	FSM	ENSG00000141504.12	ENST00000576846.1	1563	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623650	True	NA	-2	True	AATAAA	-20	NA	7627796	7626233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626200_7627800
transcript_57408.known	chr17	+	1758	11	FSM	ENSG00000161960.16	ENST00000293831.13	1758	11	0	0	0	0	multi-exon	FALSE	canonical	3	10776	junction_1	1273.99711538135	36416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGCTTCTCATTTCT	7340154	True	NA	27	True	AATAAA	-18	NA	7572824	7579006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578164_7578245_7578341
transcript_57409.known	chr17	+	1319	11	FSM	ENSG00000161960.16	ENST00000577269.5	1319	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	4294.18104066421	1123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTAGACACCCTTTTCT	7340166	True	NA	41	True	AATAAA	-35	NA	7572836	7578641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578226_7578245_7578341
transcript_5741.known	chr1	+	3074	3	FSM	ENSG00000123091.5	ENST00000242719.4	3074	3	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	31.5	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGCTAAAGTTAGAGTTGAT	51231929	True	NA	7	True	AATAAA	-20	NA	51236272	51273447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51236880_51269955_51270126_51271150
transcript_57410.known	chr17	+	1645	10	FSM	ENSG00000161960.16	ENST00000582746.5	1645	10	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_9	4336.00741708172	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTGGAAACTGCCTGTT	7340171	True	NA	11	True	AATAAA	-2	NA	7572841	7578990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7577917_7578341
transcript_57411.known	chr17	+	916	8	FSM	ENSG00000161960.16	ENST00000578495.5	916	8	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	4758.72789123912	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTTTGCCCGCTGCCAG	7340155	True	NA	NA	False	NA	NA	NA	7572825	7577706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574545_7574679_7575118_7575259_7576529_7576693_7577055_7577166_7577343_7577488_7577568
transcript_57412.known	chr17	+	577	6	FSM	ENSG00000161960.16	ENST00000585024.5	577	6	0	0	0	0	multi-exon	FALSE	canonical	1	31	junction_1	5655.13404262003	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGATTCAAGGACCAGATCT	7340157	True	NA	NA	False	AATACA	-44	NA	7572827	7577110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574265_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055
transcript_57413.known	chr17	+	1577	9	FSM	ENSG00000161960.16	ENST00000578324.5	1577	9	0	0	0	0	multi-exon	FALSE	canonical	3	13260	junction_4	785.816613466526	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAGGCAAAAGAAGGAACC	7574082	False	NA	16	True	AATAAA	-10	NA	7574258	7578616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7574309_7574545_7574679_7575118_7575259_7576523_7576693_7577055_7577166_7577343_7577488_7577568_7577707_7577826_7578245_7578341
transcript_57414.known	chr17	+	1645	5	FSM	ENSG00000129255.16	ENST00000577088.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_4	27.3895509273153	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGAATAATACAAAACTGTT	7579879	True	NA	-22	True	AATAAA	-15	NA	7583851	7588177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7587272_7587425
transcript_57415.known	chr17	+	438	5	FSM	ENSG00000129255.16	ENST00000585217.5	438	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	189.473448007894	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTGTTTAATACTACC	7579902	False	NA	-12	True	AATAAA	-25	NA	7583874	7588187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7585731_7585798_7585945_7586079_7586691_7586747_7588094
transcript_57416.known	chr17	-	974	6	FSM	ENSG00000141504.12	ENST00000380466.6	974	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	71.3845921750625	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATGTGGTGTTGGGTCTTT	-7623723	True	NA	-5	True	AATAAA	-17	NA	7627869	7626236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627552
transcript_57417.known	chr17	-	912	6	FSM	ENSG00000141504.12	ENST00000269298.10	912	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_5	65.6396221805092	1147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGTTGGGTCTTTCTT	-7623675	True	NA	-2	True	AATAAA	-20	NA	7627821	7626233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7626942_7627045_7627142_7627227_7627362_7627415_7627569
transcript_57418.known	chr17	-	640	5	FSM	ENSG00000141504.12	ENST00000573566.1	640	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	108.544921576276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGAGACTACGTCCACAG	-7623659	True	NA	NA	False	NA	NA	NA	7627805	7626387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627569
transcript_57419.known	chr17	+	552	5	FSM	ENSG00000161960.16	ENST00000582169.5	552	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5801.04979184802	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGAGTAATTCGGTTCTC	7340155	True	NA	NA	False	NA	NA	NA	7572825	7576690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7572865_7574259_7574309_7574521_7574679_7575118_7575259_7576523
transcript_5742.known	chr1	-	2718	18	FSM	ENSG00000085831.16	ENST00000413473.6	2718	18	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_17	6.25025951018329	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTGTGTATGCGTTAGA	-51344985	True	NA	29	True	NA	NA	NA	51345116	51287257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51288281_51288838_51288956_51290004_51290120_51290513_51290626_51294390_51294512_51296078_51296171_51301571_51301734_51302356_51302417_51302505_51302574_51303083_51303193_51305080_51305147_51305976_51306077_51309260_51309326_51311253_51311322_51312118_51312196_51312811_51312944_51321720_51321826_51344990
transcript_57420.known	chr17	+	809	7	FSM	ENSG00000129255.16	ENST00000576272.5	809	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	149.242531918128	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATTCCTCTGCACTTGC	7579912	False	NA	NA	False	NA	NA	NA	7583884	7587643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7583966_7585731_7585798_7585950_7586079_7586691_7586778_7586898_7587018_7587160_7587272_7587425
transcript_57421.known	chr17	-	582	5	FSM	ENSG00000141504.12	ENST00000576686.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	111.126898184013	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGGAGCCCAAGATCTGAC	-7623730	True	NA	NA	False	NA	NA	NA	7627876	7626533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7626615_7626752_7626794_7627142_7627227_7627362_7627415_7627552
transcript_57422.known	chr17	+	3341	7	FSM	ENSG00000129244.9	ENST00000250111.9	3341	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_5	19.437220880454	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGTGTGTGGGTTGTTC	7647020	True	NA	16	True	AATAAA	-41	NA	7650925	7657770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7651631_7653373_7653503_7653840_7653946_7654051_7654258_7654627_7654685_7655526_7655626_7655730
transcript_57423.known	chr17	-	1883	12	FSM	ENSG00000141510.18	ENST00000635293.1	1883	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	124.25001455011	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTGTGTGTGGGTTTTT	-7681545	True	NA	-7	True	ATTAAA	-14	NA	7687491	7665415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7665532_7666901_7667426_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676623_7687376
transcript_57427.known	chr17	+	2657	11	FSM	ENSG00000141499.17	ENST00000498311.5	2657	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	79.8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTAGAGTCTTCGTGTCTGT	7687515	False	NA	13	True	TATAAA	-15	NA	7687599	7703501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701426_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_57428.known	chr17	+	1749	11	FSM	ENSG00000141499.17	ENST00000396463.7	1749	11	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	18.5280867873615	491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	7686478	True	NA	14	True	TATAAA	-16	NA	7688476	7703502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7688562_7688647_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_57430.known	chr17	-	2506	11	FSM	ENSG00000141510.18	ENST00000445888.6	2506	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	98.9664589646411	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTGTCTGAGGGGTGA	-7681541	True	NA	-12	True	AATAAA	-13	NA	7687487	7668420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7669691_7670608_7670716_7673534_7673609_7673700_7673838_7674180_7674291_7674858_7674972_7675052_7675237_7675993_7676273_7676381_7676404_7676520_7676620_7687376
transcript_57453.nnic	chr17	-	866	2	NNC	ENSG00000141510.18	novel	1883	12	NA	NA	-1	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTTGTGATCATATGT	-7681593	True	NA	-41	True	AATAAA	-25	NA	7687539	7685248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_7685952_7687376
transcript_57454.known	chr17	-	1112	1	FSM	ENSG00000141510.18	ENST00000571370.1	1112	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTACAATTCTTTTTG	-7680425	False	NA	-52	True	AATAAA	-14	NA	7686371	7685259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7685300_7686400
transcript_57455.known	chr17	+	4011	10	FSM	ENSG00000141499.17	ENST00000316024.9	4011	10	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	17.763883459299	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGAGTCTTCGTGTCTGTT	NA	False	NA	14	True	TATAAA	-16	NA	7686300	7703502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7689080_7689223_7689323_7689589_7689702_7700740_7700830_7701458_7701550_7701656_7701790_7702343_7702553_7702742_7702847_7702992_7703128_7703242
transcript_57456.nnic	chr17	-	1223	2	Antisense	novelGene_ENSG00000132510.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACAGATTTTCAGGGGT	-7851802	False	2375	NA	False	AATAAA	-21	NA	7851815	7850457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_7851322_7851456
transcript_5746.known	chr1	-	5163	25	FSM	ENSG00000085832.17	ENST00000371733.8	5163	25	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_14	16.6582791394816	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGTTATCATGTCGTG	-51514851	True	NA	-9	True	AATAAA	-20	NA	51519266	51354262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51356847_51361170_51361356_51363865_51364029_51365952_51366030_51394380_51394448_51399031_51399166_51400917_51400954_51402434_51402526_51403418_51403533_51405904_51406109_51408134_51408333_51409534_51409697_51421785_51421859_51440346_51440433_51444888_51445046_51446959_51447106_51448045_51448136_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_57460.known	chr17	+	874	2	FSM	ENSG00000167874.7	ENST00000301599.7	874	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCTCTGCGAACAGAGGC	7854735	True	NA	5	True	AATAAA	-17	NA	7855065	7856099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7855285_7855444
transcript_57461.known	chr17	+	510	2	FSM	ENSG00000167874.7	ENST00000574668.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGTGTCCACGCATCAATA	7854735	True	NA	-33	True	GGGGCT	-23	NA	7855065	7856061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7855285_7855770
transcript_57462.known	chr17	+	3489	4	FSM	ENSG00000182224.12	ENST00000332439.5	3489	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	6.12825877028341	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAGTGAACTCATCCGT	7857729	True	NA	11	True	AATAAA	-18	NA	7858002	7862282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7858295_7858402_7858480_7858605_7858825_7859381
transcript_57476.known	chr17	-	529	3	FSM	ENSG00000183011.14	ENST00000575208.2	529	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	312.5	4203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7858066	False	NA	-4	True	ATTAAA	-13	NA	7858079	7856684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7857014_7857199_7857893
transcript_57478.known	chr17	-	424	2	FSM	ENSG00000183011.14	ENST00000576384.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	0	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTATGACCGAATGGGCC	-7854888	True	NA	-18	True	NA	NA	NA	7857263	7856698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7856984
transcript_57479.known	chr17	-	999	2	FSM	ENSG00000183011.14	ENST00000333775.9	999	2	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_1	0	2804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7857841	False	NA	-4	True	ATTAAA	-13	NA	7857854	7856684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7857014
transcript_5748.known	chr1	-	1773	9	FSM	ENSG00000085832.17	ENST00000371727.5	1773	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	40.9939019855393	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-51514830	True	NA	NA	False	NA	NA	NA	51519245	51457535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51458734_51461090_51461151_51463672_51463799_51465260_51465327_51468472_51468569_51471689_51471738_51472858_51472949_51481272_51481315_51519198
transcript_57480.known	chr17	-	520	3	FSM	ENSG00000183011.14	ENST00000575771.6	520	3	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_2	125.5	7511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855405	True	NA	-4	True	ATTAAA	-13	NA	7857559	7856684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7857014_7857199_7857382
transcript_57481.known	chr17	-	553	3	FSM	ENSG00000183011.14	ENST00000575071.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	132	1841	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGCCTGTGTCTGTGTGTA	-7855408	True	NA	-4	True	ATTAAA	-13	NA	7857562	7856684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7856844_7856984_7857199_7857382
transcript_57482.known	chr17	-	353	2	FSM	ENSG00000179859.10	ENST00000640240.1	353	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAGGAACTCGGAAGCTAC	-7915903	True	NA	NA	False	NA	NA	NA	7915975	7915521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7915578_7915678
transcript_57483.known	chr17	+	2783	19	FSM	ENSG00000170037.14	ENST00000565740.5	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_17	26.7253982866532	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAGTCTCTGGCTCATAG	7933058	False	NA	23	True	AATAAA	-17	NA	7933079	7949578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948620_7949081_7949158_7949384
transcript_57490.known	chr17	-	759	5	FSM	ENSG00000170043.12	ENST00000540486.5	759	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	465.898594116788	2113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGAGCGTGTTGGTTTGA	-7931976	False	NA	-3	True	AATAAA	-20	NA	7931999	7930344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730_7931830_7931939
transcript_57494.known	chr17	-	648	4	FSM	ENSG00000170043.12	ENST00000571739.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	546.798561324613	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGCCTGAGCGTGTTGGTT	-7919501	True	NA	-6	True	AATAAA	-17	NA	7931962	7930347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931730_7931830_7931939
transcript_57495.known	chr17	-	409	4	FSM	ENSG00000170043.12	ENST00000572656.2	409	4	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	499.681454084055	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGCCCACTGGGATCAAAGT	-7932100	False	NA	NA	False	NA	NA	NA	7932123	7931094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7931150_7931505_7931577_7931730_7931830_7931939
transcript_57496.known	chr17	-	561	3	FSM	ENSG00000170043.12	ENST00000575639.1	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	604	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCCCAGAGCAACAGCCTA	-7919460	True	NA	NA	False	NA	NA	NA	7931921	7930503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931730
transcript_57501.known	chr17	-	2879	14	FSM	ENSG00000170049.10	ENST00000303790.3	2879	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_13	6.05692913385524	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTCCTTGTACTTCTCA	-7929833	False	12461	NA	False	TTTAAA	-16	NA	7929856	7921858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7923180_7923455_7923545_7923710_7923832_7923967_7924063_7924144_7924266_7924414_7924501_7925096_7925184_7925682_7925727_7925930_7925976_7926058_7926104_7927343_7927424_7927656_7927695_7927782_7927827_7929193
transcript_57502.known	chr17	-	812	4	FSM	ENSG00000170043.12	ENST00000303731.9	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	1188	junction_2	26.2339898266013	5242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGCCTGAGCGTGTTGGT	-7919485	True	NA	-7	True	AATAAA	-16	NA	7931946	7930348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_7930735_7931010_7931150_7931505_7931577_7931730
transcript_57503.known	chr17	+	3769	19	FSM	ENSG00000170037.14	ENST00000380262.7	3769	19	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_17	37.6227620227732	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCAGAGTCTCTGGCTCAT	7929690	True	NA	21	True	AATAAA	-15	NA	7932154	7949576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_7933350_7934137_7934223_7934464_7934547_7934988_7935146_7936365_7936483_7936700_7936818_7937163_7937263_7939512_7939750_7940095_7940243_7943390_7943525_7944122_7944249_7944475_7944639_7945727_7945987_7947570_7947723_7947915_7947980_7948156_7948328_7948486_7948686_7949084_7949158_7949384
transcript_57505.nic	chr17	+	552	3	ISM	ENSG00000132518.7	ENST00000254854.5	3680	20	13451	0	-63	0	3prime_fragment	FALSE	canonical	1	1	junction_2	2.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGTGGTGTGTGCTGCTT	8015931	True	NA	NA	False	AATAAA	-17	NA	8016065	8020342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_8016291_8016442_8016555_8020127
transcript_57507.known	chr17	+	2697	14	FSM	ENSG00000179593.16	ENST00000380183.9	2697	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_8	2.09535976490404	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGGCCTGGTGGTATGTGG	8039032	True	NA	NA	False	AATAAA	-15	NA	8039058	8049134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8039303_8039385_8039606_8039901_8039984_8042368_8042492_8042780_8042885_8044828_8045002_8045237_8045385_8045482_8045687_8046667_8046755_8046906_8047077_8047257_8047380_8047563_8047665_8047744_8047916_8048385
transcript_57509.known	chr17	-	517	2	FSM	ENSG00000263427.1	ENST00000577807.1	517	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTATTAATCTTTAAAT	NA	False	NA	NA	False	AGTAAA	-17	NA	8057621	8056224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8056692_8057571
transcript_5751.known	chr1	+	3660	24	FSM	ENSG00000117859.19	ENST00000428468.6	3660	24	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	186.927702531045	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGACTGCAGTTTATTTAT	51614191	True	NA	12	True	CATAAA	-44	NA	51617091	51789219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_57511.known	chr17	-	1221	8	FSM	ENSG00000179477.11	ENST00000649809.1	1221	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.16057691494799	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAACAAAACAAACAAGCA	-8079892	False	NA	NA	False	NA	NA	NA	8079903	8072719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8072951_8073147_8073319_8073656_8073758_8075594_8075717_8076174_8076345_8076656_8076744_8076989_8077194_8079768
transcript_57515.nnic	chr17	+	729	3	NNC	ENSG00000214999.3	novel	1804	2	NA	NA	-24	645	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTGATTTCTTTTCCTT	8079212	True	NA	3	True	AATAAA	-17	NA	8079457	8082210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8079525_8081193_8081333_8081687
transcript_57517.nnic	chr17	+	524	2	NNC	ENSG00000214999.3	novel	1804	2	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	NA	False	NA	NA	False	AATAAA	-19	NA	8079372	8081565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8079525_8081193
transcript_57519.nnic	chr17	+	477	2	NNC	ENSG00000214999.3	novel	1804	2	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	8079215	True	NA	NA	False	AATAAA	-19	NA	8079460	8081565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8079525_8081152
transcript_57520.known	chr17	+	1804	2	FSM	ENSG00000214999.3	ENST00000399413.3	1804	2	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTCTCATCATCCACC	8079236	True	NA	NA	False	AATAAA	-19	NA	8079481	8081565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8079525_8079804
transcript_57532.known	chr17	-	1479	4	FSM	ENSG00000220205.9	ENST00000404970.3	1479	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	104.680466181614	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-8163286	True	NA	NA	False	NA	NA	NA	8163546	8160405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8163466
transcript_57534.known	chr17	-	2126	5	FSM	ENSG00000220205.9	ENST00000316509.11	2126	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	36.0104151600617	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGTCTAAGATCTTTT	-8161626	True	NA	-2	True	AATAAA	-18	NA	8162948	8159148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8160872_8161472_8161525_8161607_8161767_8162248_8162370_8162877
transcript_57535.known	chr17	-	557	4	FSM	ENSG00000220205.9	ENST00000481878.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_3	37.3214266727424	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGTTATTTAGCCTGCATT	-8161626	True	NA	NA	False	NA	NA	NA	8162948	8161318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8161525_8161607_8161767_8162248_8162370_8162877
transcript_57536.known	chr17	-	756	5	FSM	ENSG00000179029.15	ENST00000316425.9	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	19.536824204563	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTAAGACTTATATACAGT	-8175404	True	NA	-12	True	AATAAA	-17	NA	8176399	8174000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8174519_8174617_8175756_8175876_8175958_8176027_8176199
transcript_57539.known	chr17	-	726	5	FSM	ENSG00000179029.15	ENST00000533070.5	726	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	23.8890665368072	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGACTTATATACAGTTT	-8175393	True	NA	-10	True	AATAAA	-19	NA	8176388	8173998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8174540_8174617_8175756_8175876_8175958_8176027_8176199
transcript_5754.known	chr1	+	3352	26	FSM	ENSG00000117859.19	ENST00000371714.5	3352	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	240.670416960623	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	NA	False	NA	20	True	CATAAA	-29	NA	51577178	51788469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51577257_51598123_51598194_51614304_51614420_51616873_51617222_51651990_51652042_51669433_51669513_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_57551.known	chr17	-	455	3	FSM	ENSG00000179029.15	ENST00000431792.2	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	21	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTAAGACTTATATACA	-8175321	False	NA	-14	True	AATAAA	-15	NA	8176316	8174002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8175958_8176027_8176199
transcript_57555.known	chr17	-	2358	3	FSM	ENSG00000179029.15	ENST00000532998.5	2358	3	0	0	0	0	multi-exon	TRUE	canonical	3	51	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAATTTAAAAAAAT	-8175378	True	NA	NA	False	NA	NA	NA	8176373	8173741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8175858_8175958_8176027_8176199
transcript_57558.known	chr17	-	1210	2	FSM	ENSG00000179029.15	ENST00000449985.6	1210	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGCTCTTTGTTTTTTGTC	-8175378	True	NA	-25	True	AATACA	-3	NA	8176373	8173236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8174273_8176199
transcript_57561.known	chr17	-	134	1	FSM	ENSG00000200463.1	ENST00000363593.1	134	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTGACGATCACTTAC	-8172592	False	995	26	True	NA	NA	NA	8173587	8173453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8173500_8173600
transcript_57563.nnic	chr17	+	485	4	NNC	ENSG00000266824.1	novel	465	3	NA	NA	-2645	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.942809041582063	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGTTGTCATGTCTCGCT	NA	False	NA	NA	False	AATAAA	-15	NA	8174166	8182812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_8174285_8174775_8174875_8181398_8181516_8182661
transcript_57565.nnic	chr17	-	1365	3	Genic_Genomic	ENSG00000271002.1	novel	315	1	NA	NA	-826	7848	multi-exon	FALSE	canonical	0	0	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGGCTATGTGTTGCAA	-8199974	False	NA	NA	False	AATAAA	-42	NA	8200263	8191274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_-_8192501_8199212_8199289_8200200
transcript_5758.known	chr1	+	2831	23	FSM	ENSG00000117859.19	ENST00000495776.5	2831	23	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	184.080117528813	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51614191	True	NA	20	True	CATAAA	-29	NA	51617091	51788469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51617222_51651990_51652042_51714002_51714080_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_57582.known	chr17	-	1243	9	FSM	ENSG00000178999.13	ENST00000585124.6	1243	9	0	0	0	0	multi-exon	TRUE	canonical	3	770	junction_8	125.652298029125	4388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGTAGATGTTTCTAGG	-8190797	True	NA	-8	True	AATAAA	-22	NA	8210575	8204733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_57583.known	chr17	-	1167	8	FSM	ENSG00000178999.13	ENST00000534871.5	1167	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	370.090667324666	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTACTCATGAGTGTAGAT	-8190803	True	NA	-17	True	AATAAA	-13	NA	8210581	8204742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206889_8207175_8207368_8207570_8207626_8207737_8207841_8210529
transcript_57584.known	chr17	-	939	8	FSM	ENSG00000178999.13	ENST00000578549.5	939	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	374.982557417471	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCCCTGTCATTCACTCG	-8190446	False	19778	NA	False	NA	NA	NA	8210224	8204870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8205045_8205215_8205391_8206490_8206640_8206749_8206935_8207317_8207368_8207570_8207626_8207737_8207841_8210176
transcript_57585.known	chr17	-	1010	6	FSM	ENSG00000178999.13	ENST00000584561.1	1010	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	375.828152218537	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTCTGTGCATGCGCCC	-8190781	True	NA	NA	False	NA	NA	NA	8210559	8206518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8206640_8206739_8207368_8207570_8207626_8207737_8207841_8210176_8210250_8210529
transcript_57586.known	chr17	+	5369	28	FSM	ENSG00000178921.14	ENST00000314666.11	5369	28	0	0	0	0	multi-exon	FALSE	canonical	3	380	junction_1	58.0448953530214	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATTGCCTGGGGTCCAC	8234527	True	NA	14	True	AATAAA	-18	NA	8249288	8270486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8249340_8253858_8254080_8254165_8254302_8255026_8255133_8255501_8255692_8255804_8255911_8256266_8256408_8256523_8256649_8256834_8256964_8257806_8257939_8258070_8258200_8262919_8262994_8263108_8263266_8263574_8263637_8263774_8263937_8264211_8264338_8264469_8264602_8264894_8265126_8265287_8265469_8265555_8265640_8265861_8266018_8266233_8266354_8266752_8266899_8267027_8267236_8267371_8267464_8267550_8267666_8268532_8268857_8268953
transcript_57587.known	chr17	-	7039	23	FSM	ENSG00000178971.16	ENST00000651323.1	7039	23	0	0	0	0	multi-exon	TRUE	canonical	3	82	junction_4	17.5854466501223	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTAGTTCTTGGTTATTAA	-8245676	True	NA	0	True	AATAAA	-22	NA	8248056	8224814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8228320_8228502_8228630_8228726_8228893_8229141_8229207_8229301_8229447_8229890_8229969_8230293_8230469_8230562_8230652_8231275_8231470_8231725_8231816_8231902_8232228_8232360_8232476_8232905_8233033_8234454_8234656_8234748_8234927_8235052_8235286_8235830_8235960_8236057_8236343_8237374_8237520_8238030_8238243_8238391_8238630_8242984_8243149_8248003
transcript_57592.known	chr17	+	674	1	FSM	ENSG00000269947.1	ENST00000602597.1	674	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATCAATCAGTCTCCCTC	8277752	False	NA	23	True	ATTAAA	-23	NA	8277762	8278436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8277800_8278400
transcript_57594.known	chr17	-	1940	5	FSM	ENSG00000125434.11	ENST00000577745.2	1940	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.77263412660235	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGATTGTCTTATGTTTA	-8294956	True	NA	2	True	TATAAA	-17	NA	8295400	8290060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8290679_8290841_8290977_8291332_8291486_8292522_8292589_8294432
transcript_57602.known	chr17	-	354	2	FSM	ENSG00000125434.11	ENST00000581320.1	354	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACAGCGCCTGGCCTCCT	-8288591	False	NA	NA	False	NA	NA	NA	8289035	8288168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8288433_8288945
transcript_57603.known	chr17	+	831	5	FSM	ENSG00000108961.14	ENST00000226105.11	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_4	72.6476943887416	2745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAATCTCTGTGCCTTTGA	8286735	True	NA	NA	False	AATAAA	-17	NA	8288669	8290087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502_8289589_8289812
transcript_57604.known	chr17	+	1074	4	FSM	ENSG00000108961.14	ENST00000407006.8	1074	4	0	0	0	0	multi-exon	FALSE	canonical	3	431	junction_3	19.8662192343351	903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTCTGTGCCTTTGAATC	8286719	True	NA	NA	False	AATAAA	-20	NA	8288653	8290090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289502
transcript_57605.known	chr17	+	1140	3	FSM	ENSG00000108961.14	ENST00000439238.3	1140	3	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_2	2	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286743	True	NA	NA	False	AATAAA	-22	NA	8288677	8290092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257
transcript_57606.known	chr17	+	749	4	FSM	ENSG00000108961.14	ENST00000580434.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	197.053856146542	558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTGCCTTTGAATCTA	8286736	True	NA	NA	False	AATAAA	-22	NA	8288670	8290092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8288866_8288955_8289073_8289257_8289415_8289812
transcript_57627.known	chr17	-	603	4	FSM	ENSG00000161970.15	ENST00000584906.6	603	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	5680.06081735829	5066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGTTTTGTGTGTGGT	-8382269	False	161459	90	True	AATAAA	-43	NA	8382315	8377520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8380586_8380704_8382142
transcript_57628.known	chr17	-	353	4	FSM	ENSG00000161970.15	ENST00000585176.1	353	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5812.41774135342	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGGGCAAATACAAGGAAG	-8221733	True	NA	1	True	AAAAAG	-42	NA	8383192	8377609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8381997_8382091_8383156
transcript_5763.nic	chr1	+	2705	21	NIC	ENSG00000117859.19	novel	2210	21	NA	NA	-9	-66	combination_of_known_junctions	FALSE	canonical	3	195	junction_1	118.408730674727	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACAGTTTAATTAATTATT	51721675	True	NA	14	True	ATTAAA	-18	NA	51729798	51788398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51756319_51756359_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_57637.known	chr17	-	564	4	FSM	ENSG00000161970.15	ENST00000583011.6	564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6492.96836756673	31500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGCCTGTGTTTTGTGTGTG	-8221754	True	NA	88	True	AATAAA	-41	NA	8383213	8377522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382339_8383156
transcript_57641.known	chr17	-	3209	3	FSM	ENSG00000184619.8	ENST00000643221.1	3209	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCGAGACCATGCCACTGC	-8376612	False	161459	NA	False	NA	NA	NA	8376658	8368709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8370387_8371308_8372082_8375899
transcript_57644.known	chr17	-	12370	2	FSM	ENSG00000184619.8	ENST00000396267.3	12370	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCATTATGTCGGCGACTT	-8376658	False	161459	NA	False	GATAAA	-1	NA	8376704	8358821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8370387_8375899
transcript_57645.known	chr17	-	528	4	FSM	ENSG00000161970.15	ENST00000648839.1	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	9272	junction_3	2286.31406416529	293844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTGTGGTGATTT	-8221734	True	NA	95	True	ATTAAA	-20	NA	8383193	8377515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8383156
transcript_57646.known	chr17	-	763	4	FSM	ENSG00000161970.15	ENST00000582556.5	763	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	6195.7682511713	7804	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCTTTGATTAAAACTTGA	-8221707	True	NA	62	True	AATAAA	-15	NA	8383166	8377548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377693_8379795_8379937_8382142_8382316_8382861
transcript_57647.known	chr17	-	443	3	FSM	ENSG00000161970.15	ENST00000582485.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7432	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGATTAAAACTTGAAACAA	-8382263	False	161459	67	True	AATAAA	-20	NA	8382309	8377543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8377679_8379795_8379937_8382142
transcript_5765.known	chr1	+	2721	20	FSM	ENSG00000117859.19	ENST00000361556.9	2721	20	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_1	125.149528293689	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721691	True	NA	20	True	CATAAA	-29	NA	51729814	51788469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51730002_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_57657.nic	chr17	-	1360	9	ISM	ENSG00000133026.14	ENST00000687661.1	2213	14	8	7747	0	-1830	5prime_fragment	FALSE	canonical	3	658	junction_4	94.3543851657145	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTGAGGCAATATTAAT	-8611398	True	NA	NA	False	AATAAA	-20	NA	8630761	8548455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_57666.nic	chr17	-	937	6	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	6	2696	-2	1949	5prime_fragment	FALSE	canonical	3	69	junction_1	325.560194126985	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGCTTAGAGCCTTAT	-8611400	True	NA	-3	True	ATTAAA	-19	NA	8630763	8576509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8576673_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_57668.known	chr17	-	732	6	ISM	ENSG00000133026.14	ENST00000692526.1	7809	43	90	103091	4	1153	5prime_fragment	FALSE	canonical	3	122	junction_5	380.2067858416	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAAGTTATTCAGTACC	-8611354	True	NA	NA	False	NA	NA	NA	8630717	8577305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8623423_8623498_8630653
transcript_57673.nic	chr17	-	1074	3	ISM	ENSG00000133026.14	ENST00000411957.2	1984	7	6	30581	-2	-25936	5prime_fragment	FALSE	canonical	3	721	junction_2	91.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTAAGTTGGTTGATTT	-8611400	True	NA	-15	True	AATAAA	-13	NA	8630763	8604394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_8604983_8622901_8623278_8630653
transcript_57676.known	chr17	-	7662	41	FSM	ENSG00000133026.14	ENST00000269243.8	7662	41	0	0	0	0	multi-exon	TRUE	canonical	3	658	junction_36	158.909012881586	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGAATCTGTTTTCTCAC	-8611398	True	NA	-7	True	AATAAA	-33	NA	8630761	8474211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8475949_8476875_8477049_8478337_8478447_8480109_8480319_8480401_8480526_8481321_8481411_8484137_8484267_8487432_8487595_8490339_8490553_8492296_8492510_8492775_8493025_8493732_8493886_8495136_8495242_8499269_8499477_8500825_8500971_8504693_8504907_8506317_8506490_8508553_8508678_8509811_8509950_8512450_8512658_8513537_8513670_8513785_8513895_8518630_8518792_8518880_8518951_8520877_8521000_8521091_8521286_8535386_8535502_8535757_8535932_8542106_8542281_8545447_8545601_8546543_8546663_8548312_8548409_8548643_8548788_8552045_8552145_8553954_8554019_8569719_8569813_8577235_8577339_8589080_8589109_8604825_8604983_8622901_8623278_8630653
transcript_57678.nic	chr17	+	1411	9	NIC	ENSG00000166579.16	novel	2352	9	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	76.2970141945279	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTATTCTTTCTTAAAAAA	8431500	True	NA	NA	False	ATTAAA	-35	NA	8435838	8461384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8461136
transcript_57679.known	chr17	+	2352	9	FSM	ENSG00000166579.16	ENST00000334527.12	2352	9	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_4	22.4220873247787	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACGTTGCTTTATTCAGT	8431545	True	NA	19	True	AATAAA	-19	NA	8435883	8468163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8436046_8444259_8444358_8445710_8445865_8446753_8446903_8448549_8448687_8450779_8450954_8454795_8454888_8460008_8460161_8466929
transcript_57683.known	chr17	-	2256	1	FSM	ENSG00000185156.6	ENST00000329805.6	2256	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTCTATAGTCACTATATG	NA	False	NA	49	True	AATACA	-19	NA	8799365	8797109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_8797100_8799400
transcript_57685.known	chr17	+	402	2	FSM	ENSG00000266389.1	ENST00000585297.1	402	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGCTTTGAGAGATATGAA	8965652	True	NA	NA	False	NA	NA	NA	8965895	8967070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8965994_8966766
transcript_57686.nnic	chr17	+	1842	2	FSM	ENSG00000266389.1_ENSG00000265975.1	ENST00000585297.1	402	2	-93	-1347	-93	1347	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCTCCTGCCTTCCCT	8965559	True	NA	4	True	AATAAA	-20	NA	8965802	8968417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_8965994_8966766
transcript_57689.known	chr17	-	731	7	FSM	ENSG00000170310.15	ENST00000574431.5	731	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	190.720927593755	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCCCAAAGCTCTGACCTC	-9571100	True	NA	-17	True	AATAAA	-2	NA	9575837	9250486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9575791
transcript_57694.known	chr17	-	830	8	FSM	ENSG00000170310.15	ENST00000306357.9	830	8	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_7	46.3645712736326	2714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGCATTGCTTCAG	-9571083	True	NA	-1	True	AATAAA	-18	NA	9575820	9250470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9545171_9545283_9557433_9557529_9568370_9568471_9575791
transcript_57695.known	chr17	-	638	6	FSM	ENSG00000170310.15	ENST00000575858.5	638	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	173.097198128681	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTTGTGCATTGCTTCA	-9571098	True	NA	-2	True	AATAAA	-17	NA	9575835	9250471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9505037_9505163_9568370_9568471_9575791
transcript_57696.known	chr17	-	454	5	FSM	ENSG00000170310.15	ENST00000575294.6	454	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	220.591675953559	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACCTGCTCTCAATAAAT	-9571074	True	NA	-37	True	NA	NA	NA	9575811	9250506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9250646_9378551_9378654_9491828_9491922_9568370_9568471_9575791
transcript_57697.known	chr17	-	212	2	FSM	ENSG00000265349.1	ENST00000584676.1	212	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCACTGCTTTTCTCTTGC	-9645213	True	NA	NA	False	NA	NA	NA	9645325	9638767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_9638890_9645235
transcript_57698.nnic	chr17	-	873	2	NNC	ENSG00000265349.1	novel	212	2	NA	NA	-105	-5062	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTCTTTGGTAATTGTCC	-9645318	True	NA	NA	False	AATAAA	-18	NA	9645430	9643829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_9644508_9645235
transcript_57699.known	chr17	+	471	1	FSM	ENSG00000242692.1	ENST00000475545.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTATGAGTTAATAAAAGA	10257450	False	NA	NA	False	NA	NA	NA	10258761	10259232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10258800_10259200
transcript_57704.known	chr17	-	2813	6	FSM	ENSG00000187824.9	ENST00000341871.8	2813	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	7.95989949685296	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAATCTTTTTTTTTTTT	-10729637	True	NA	NA	False	ATTAAA	-17	NA	10730023	10713294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729030_10729061_10729779
transcript_57708.known	chr17	-	1402	5	FSM	ENSG00000187824.9	ENST00000455996.6	1402	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	13.6450540489952	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGCTGGGATTACAGGT	-10729637	True	NA	NA	False	NA	NA	NA	10730023	10714675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10715589_10723269_10723330_10725010_10725135_10726203_10726265_10729779
transcript_57713.known	chr17	+	1534	4	FSM	ENSG00000170222.12	ENST00000379774.5	1534	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	2.94392028877595	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTATACTTGGATTTTT	10696853	True	NA	NA	False	NA	NA	NA	10697593	10711558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10697668_10704909_10705528_10706437_10706555_10710833
transcript_57714.known	chr17	+	1277	4	FSM	ENSG00000170222.12	ENST00000468843.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	5.71547606649408	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAGCTTGCATAACAAAAT	10696873	True	NA	21	True	AATAAA	-25	NA	10697613	10711233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10697668_10704909_10705616_10706437_10706555_10710833
transcript_57730.nnic	chr17	-	728	2	NNC	ENSG00000264016.3	novel	750	2	NA	NA	13895	-4	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_1	0	91	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGCATCTTTGGATTGTT	NA	False	NA	-6	True	AATAAA	-21	NA	10755094	10741260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_10741724_10754829
transcript_57731.known	chr17	-	9577	6	FSM	ENSG00000133028.12	ENST00000255390.10	9577	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_3	28.5685141370706	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTTTTTTTTTTGTA	-10688738	True	NA	NA	False	AATAAA	-17	NA	10697533	10672473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692763_10692962_10695740_10695832_10697234
transcript_57732.known	chr17	-	1601	6	FSM	ENSG00000133028.12	ENST00000577427.1	1601	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	151.794071030459	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTTTTGCTGTTCAGAC	-10688735	True	NA	-23	True	AGTAAA	-5	NA	10697530	10680353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10681254_10686726_10686843_10691871_10691965_10692856_10692962_10695740_10695832_10697234
transcript_57733.known	chr17	-	563	2	FSM	ENSG00000133028.12	ENST00000579396.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACCATGACACATTTTTC	-10688732	True	NA	NA	False	NA	NA	NA	10697527	10695561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_10695832_10697234
transcript_57734.known	chr17	+	1138	3	FSM	ENSG00000170222.12	ENST00000609540.1	1138	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	8	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTCAGCTTGCATAACAA	10704885	False	NA	18	True	AATAAA	-22	NA	10704899	10711230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10705528_10706437_10706551_10710833
transcript_57735.known	chr17	+	562	3	FSM	ENSG00000263400.8	ENST00000581366.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAGACACGAGCAACTAAT	10729339	True	NA	NA	False	NA	NA	NA	10729776	10767006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_10729877_10754228_10754363_10766678
transcript_57738.known	chr17	-	2261	7	FSM	ENSG00000154957.14	ENST00000454073.7	2261	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	35.0780874937934	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTCTATCTTATTTGTTT	-11996654	True	NA	-14	True	AATAAA	-13	NA	11997457	11977451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_11978745_11983296_11983405_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_57739.known	chr17	-	2295	7	FSM	ENSG00000154957.14	ENST00000580306.7	2295	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	33.6633661748528	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTGTTCACTGTGTGT	-11996672	True	NA	-1	True	AATAAA	-26	NA	11997475	11977438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_11978745_11983296_11983408_11984112_11984198_11990461_11990551_11990973_11991164_11992442_11992912_11997430
transcript_57743.nnic	chr17	+	800	2	Antisense	novelGene_ENSG00000266368.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	42	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGTTCTCTTC	NA	False	NA	20	True	AATAAA	-22	NA	11971944	11976909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_11972336_11976500
transcript_57748.known	chr17	-	3767	24	FSM	ENSG00000006744.19	ENST00000338034.9	3767	24	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_21	59.6112167671592	92	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGACAACGATTTGTAC	-13005680	True	NA	-8	True	AATAAA	-19	NA	13018027	12991611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_12993046_12993686_12993832_12994424_12994504_12994763_12994885_12994962_12995063_12995702_12995813_12995939_12995979_12996546_12996686_12998411_12998509_13000155_13000275_13002273_13002360_13002440_13002580_13003478_13003575_13004988_13005102_13005752_13005826_13005920_13005980_13010612_13010672_13011662_13011783_13013206_13013276_13014438_13014497_13015767_13015833_13016861_13016933_13017070_13017122_13017702
transcript_57754.known	chr17	-	2649	3	FSM	ENSG00000236088.11	ENST00000659114.1	2649	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGTAAACACCTTCCCAT	-14068068	True	NA	NA	False	AATAAA	-13	NA	14069489	14031639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14033662_14034007_14034417_14069271
transcript_57755.known	chr17	-	5962	2	FSM	ENSG00000236088.11	ENST00000661551.1	5962	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTAGGGCATAATAATTT	-14068071	True	NA	NA	False	AATATA	-10	NA	14069492	14028675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14034417_14069271
transcript_57756.known	chr17	+	4948	14	FSM	ENSG00000006695.12	ENST00000664217.1	4948	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	130.314503500129	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCTTAAGTAAAACCATC	14064988	True	NA	NA	False	AAAAAG	-41	NA	14069489	14231736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809_14207269_14208553_14208780_14209508_14209966_14210467_14210566_14211287_14211509_14215809_14215938_14216684_14217666_14230402
transcript_57758.known	chr17	+	2898	7	FSM	ENSG00000006695.12	ENST00000261643.8	2898	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_3	34.9638702408961	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGAGTGTGTGTGACGTCA	14065002	True	NA	11	True	AATAAA	-15	NA	14069503	14208677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14191988_14192222_14206809
transcript_57763.nnic	chr17	+	1088	6	NNC	ENSG00000006695.12	novel	2898	7	NA	NA	-1	-25211	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_5	105.711683365653	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGGTGTCTGTGTATG	14064993	True	NA	NA	False	AATAAA	-37	NA	14069494	14182302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_14069649_14074322_14074457_14076734_14077057_14102117_14102243_14159876_14159948_14182020
transcript_57764.known	chr17	+	1509	6	FSM	ENSG00000006695.12	ENST00000581931.5	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	108.512487760626	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACATACACAGCTTCCTCT	14065102	False	NA	NA	False	NA	NA	NA	14069603	14207513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734_14077057_14159876_14159948_14191988_14192222_14206809
transcript_57765.known	chr17	+	875	3	FSM	ENSG00000006695.12	ENST00000429152.6	875	3	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	8.5	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGTCTTTAGTGTTT	14064994	True	NA	NA	False	ATTAAA	-22	NA	14069495	14077322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_14069649_14074322_14074457_14076734
transcript_57767.known	chr17	-	459	1	FSM	ENSG00000230897.1	ENST00000412454.1	459	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	693	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTAGGCCTTGTTTGTT	-14705493	False	NA	NA	False	AAGAAA	-4	NA	14705534	14705075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_14705100_14705500
transcript_57768.known	chr17	-	1740	9	FSM	ENSG00000125409.13	ENST00000395930.6	1740	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.10653744329409	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCTGTCTCGGAAAGCCT	-15341527	True	NA	-1	True	ATTAAA	-27	NA	15341597	15303811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15304153_15308663_15308819_15312258_15312482_15314086_15314231_15319076_15319148_15327991_15328076_15331006_15331615_15340027_15340062_15341517
transcript_57770.known	chr17	-	2047	5	FSM	ENSG00000109099.16	ENST00000675808.1	2047	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.94172168845741	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTCACTGGTCTCTCTTG	-15262532	True	NA	-8	True	AATAAA	-9	NA	15262605	15229785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15231081_15239470_15239612_15259093_15259194_15260649_15260984_15262428
transcript_57773.known	chr17	-	914	2	FSM	ENSG00000125409.13	ENST00000470325.1	914	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTATTAGACAGAAATCA	-15331544	False	NA	NA	False	AATAAA	-18	NA	15331614	15327769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15328076_15331006
transcript_57778.known	chr17	-	1005	7	FSM	ENSG00000259024.6	ENST00000557349.5	1005	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	99.5551215268317	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAGAACCCACACACTTAC	-15562264	True	NA	NA	False	NA	NA	NA	15563559	15437887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15438201_15503097_15503233_15540432_15540562_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_57780.known	chr17	-	2833	7	FSM	ENSG00000259024.6	ENST00000522212.6	2833	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.2213327816037	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTATCTCTTTTGTTCTT	-15562266	True	NA	-11	True	AATAAA	-15	NA	15563561	15436020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_57781.known	chr17	-	520	7	FSM	ENSG00000259024.6	ENST00000518506.4	520	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	109.031213675514	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGTCACCTATACCTCT	-15562153	True	NA	NA	False	AAAACA	-15	NA	15563448	15438140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15553764_15553830_15555281_15555365_15563436
transcript_57782.known	chr17	-	556	6	FSM	ENSG00000259024.6	ENST00000481756.7	556	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	90.8858624869677	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTCGAGGAAAGACCCTG	-15562177	True	NA	NA	False	NA	NA	NA	15563472	15438063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15438201_15440207_15440286_15545784_15545917_15547058_15547149_15555281_15555365_15563436
transcript_57784.nnic	chr17	-	1716	7	NIC	ENSG00000259024.6	novel	1005	7	NA	NA	-44	-64124	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	105.885157914916	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGCCTTCGTAATGAA	-15562310	True	NA	NA	False	ATTAAA	-18	NA	15563605	15502264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_15503233_15540432_15540562_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_57786.known	chr17	-	1527	6	FSM	ENSG00000175106.17	ENST00000225576.7	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	96.3713650416969	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGGCCTTCGTAATGAAA	-15562249	True	NA	NA	False	ATTAAA	-19	NA	15563544	15502263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15503233_15545784_15545917_15547058_15547149_15553684_15553830_15555281_15555365_15563436
transcript_57789.nic	chr17	-	2508	11	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	29	junction_7	9.55824251627882	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683075	True	NA	-15	True	AATAAA	-16	NA	15684317	15627965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_57794.nic	chr17	-	2256	9	NIC	ENSG00000221926.13	novel	3358	12	NA	NA	-6	0	intron_retention	FALSE	canonical	3	8	junction_5	14.2916059279565	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683075	True	NA	-15	True	AATAAA	-16	NA	15684317	15627965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_57795.known	chr17	-	3358	12	FSM	ENSG00000221926.13	ENST00000649191.2	3358	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	16.9349753005356	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	-15683069	True	NA	-15	True	AATAAA	-16	NA	15684311	15627965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15629199_15631618_15631715_15632508_15632675_15636035_15636270_15642720_15642817_15651090_15651947_15677175_15677281_15677574_15677722_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_57799.known	chr17	-	559	5	FSM	ENSG00000221926.13	ENST00000473659.5	559	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.3390796058137	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTTGAAAATAAACAGCAC	-15683033	True	NA	NA	False	AAAAAG	-25	NA	15684275	15654261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15654432_15680864_15680954_15682853_15682952_15683035_15683158_15684195
transcript_57805.known	chr17	+	5443	6	FSM	ENSG00000187607.16	ENST00000395894.6	5443	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	42.4358339142758	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTAAATTGCTTTTAA	15693756	True	NA	10	True	AATAAA	-27	NA	15699738	15720787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_57808.nic	chr17	+	829	6	NIC	ENSG00000187607.16	novel	607	6	NA	NA	-4	114	intron_retention	FALSE	canonical	2	5	junction_5	77.8881248971883	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTATTCAAGTTTCTT	15693732	True	NA	NA	False	GATAAA	-25	NA	15699714	15710052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15709815
transcript_57809.known	chr17	+	607	6	FSM	ENSG00000187607.16	ENST00000585194.5	607	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	57.9434206791418	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATGTCTTTCAGACATGG	15693762	True	NA	NA	False	NA	NA	NA	15699744	15716044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15715999
transcript_57811.nic	chr17	+	946	5	ISM	ENSG00000187607.16	ENST00000421016.5	5541	6	48	12358	44	0	5prime_fragment	FALSE	canonical	3	78	junction_1	43.222534631833	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	NA	False	NA	10	True	AATAAA	-22	NA	15699624	15708424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_15699778_15700047_15700367_15701151_15701241_15706386_15706502_15708154
transcript_57813.nic	chr17	+	769	5	ISM	ENSG00000187607.16	ENST00000585194.5	607	6	-30	7620	-4	0	5prime_fragment	FALSE	canonical	3	31	junction_1	63.1822759957253	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	15693732	True	NA	10	True	AATAAA	-22	NA	15699714	15708424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_15699778_15700134_15700367_15701151_15701241_15706386_15706502_15708154
transcript_57818.known	chr17	+	582	3	FSM	ENSG00000187607.16	ENST00000585207.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	80	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTGATGTGGAGTTTC	NA	False	NA	NA	False	NA	NA	NA	15699576	15701300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15699778_15700134_15700367_15701151
transcript_57821.known	chr17	+	427	3	FSM	ENSG00000187607.16	ENST00000481540.1	427	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAGATTAGACACGTACTA	15701187	True	NA	10	True	AATAAA	-22	NA	15701198	15708424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15701241_15706386_15706502_15708154
transcript_57822.known	chr17	+	654	5	FSM	ENSG00000187607.16	ENST00000395893.6	654	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	74.3152070575061	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAACAGTTGAGTTATCAGA	15700118	False	NA	NA	False	NA	NA	NA	15700132	15709938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15700367_15701151_15701241_15706386_15706502_15708154_15708248_15709815
transcript_57823.known	chr17	+	690	1	FSM	ENSG00000276855.1	ENST00000612568.1	690	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAGTGTCTAAAAGTGG	15788668	False	NA	15	True	AATAAA	-24	NA	15789015	15789705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15789000_15789700
transcript_57824.known	chr17	+	1522	2	FSM	ENSG00000170425.4	ENST00000304222.3	1522	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTTGCCAGGAAGGTG	15945052	True	NA	NA	False	AATAAA	-23	NA	15945129	15975746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_15945584_15974678
transcript_57834.known	chr17	-	677	5	FSM	ENSG00000214941.8	ENST00000584519.5	677	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	230.323685277915	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGGCTGGGGTGCAGTG	-15994762	True	NA	44	True	NA	NA	NA	15999636	15977682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15999518
transcript_57845.known	chr17	-	969	6	FSM	ENSG00000214941.8	ENST00000476496.5	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	251.893151951378	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994714	True	NA	0	True	GATAAA	-32	NA	15999588	15976559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977093_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999502
transcript_57846.known	chr17	-	1264	8	FSM	ENSG00000214941.8	ENST00000490395.5	1264	8	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	246.720200111092	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGACTCAGCATAACTTA	-15994776	True	NA	0	True	GATAAA	-32	NA	15999650	15976559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977093_15977578_15977701_15977799_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_57847.known	chr17	-	671	6	FSM	ENSG00000214941.8	ENST00000474716.5	671	6	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_5	173.724609655627	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTAGTCTTTTTTTTTTTCT	-15994765	True	NA	0	True	AATAAA	-28	NA	15999639	15977726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999505
transcript_57848.known	chr17	-	558	6	FSM	ENSG00000214941.8	ENST00000495825.6	558	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	207.269486418045	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTAGTCTTTTTTTTTT	-15994809	True	NA	-3	True	AATAAA	-25	NA	15999683	15977729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15977914_15978043_15978164_15981039_15981145_15987265_15987369_15993756_15993779_15999659
transcript_57849.known	chr17	-	918	6	FSM	ENSG00000214941.8	ENST00000486706.6	918	6	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	237.408845665026	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTATTTAGTCTTTTTTT	-15994795	True	NA	-6	True	AATAAA	-22	NA	15999669	15977732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_15978164_15981039_15981145_15986799_15986893_15987265_15987369_15993756_15993779_15999505
transcript_57850.known	chr17	-	1969	17	FSM	ENSG00000141027.22	ENST00000436828.5	1969	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	94.3329997601582	73	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAAAGAAAGATGA	-16201096	True	NA	-50	True	GATAAA	-22	NA	16215530	16126131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16126207_16137310_16137413_16138157_16138213_16139007_16139187_16143605_16143697_16146375_16146549_16149450_16149518_16151589_16151617_16151945_16151999_16153338_16153396_16158759_16158874_16164978_16165162_16171802_16171996_16186553_16186688_16194461_16194640_16198600_16198720_16215361
transcript_57851.nic	chr17	+	2279	9	ISM	ENSG00000011295.16	ENST00000261647.10	3050	10	238	618	228	0	3prime_fragment	FALSE	canonical	3	528	junction_6	54.2607996162976	193	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	15996151	False	NA	19	True	AATAAA	-19	NA	16000061	16028786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_16000246_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_57852.nic	chr17	+	2415	9	ISM	ENSG00000011295.16	ENST00000475723.5	2591	10	261	0	229	0	3prime_fragment	FALSE	canonical	3	64	junction_1	187.147627222468	188	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATGTATCCCAGTAATC	15996152	False	NA	19	True	AATAAA	-19	NA	16000062	16028786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_16000383_16001914_16002026_16002792_16002832_16003830_16003888_16004200_16004263_16006473_16006569_16025016_16025172_16026539_16026703_16027373
transcript_57862.known	chr17	+	1289	7	FSM	ENSG00000108474.17	ENST00000225609.10	1289	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	13.29995822884	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214730	True	NA	NA	False	NA	NA	NA	16217209	16326411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16316680_16316713_16317774_16317909_16325799
transcript_57867.known	chr17	+	1257	6	FSM	ENSG00000108474.17	ENST00000395844.8	1257	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	24.4	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTCTGATTGAAGCATC	16214730	True	NA	NA	False	NA	NA	NA	16217209	16326411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16317774_16317909_16325799
transcript_57870.nnic	chr17	+	827	5	NNC	ENSG00000108474.17	novel	946	5	NA	NA	-36	-2661	at_least_one_novel_splicesite	FALSE	canonical	1	5	junction_4	26.4669605357321	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATTGAGTGACATAGAGT	16214675	True	NA	NA	False	AATAAA	-20	NA	16217154	16314172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_16217462_16233970_16234071_16299887_16299979_16313546_16313615_16313911
transcript_57880.known	chr17	+	888	2	FSM	ENSG00000108474.17	ENST00000463810.2	888	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTTTCCCATTTGTTTG	16214766	True	NA	14	True	AATAAA	-25	NA	16217245	16218219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16217547
transcript_57881.known	chr17	+	395	2	FSM	ENSG00000108474.17	ENST00000489009.1	395	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACTAATGTGAGTGGC	16214757	True	NA	NA	False	AATAAA	-29	NA	16217236	16234140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16217462_16233970
transcript_57889.known	chr17	-	1132	5	FSM	ENSG00000166582.11	ENST00000299736.5	1132	5	0	0	0	0	multi-exon	FALSE	canonical	3	1355	junction_3	208.367913796726	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTCACTTTGGTTTATCA	-16339524	True	NA	-22	True	AATAAA	-17	NA	16353469	16342536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16348686_16349930_16350030_16353026
transcript_57891.known	chr17	-	1770	5	FSM	ENSG00000166582.11	ENST00000476243.5	1770	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_3	603.018449137338	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-16339511	True	NA	-19	True	AATAAA	-20	NA	16353456	16342533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16342942_16344596_16344712_16348615_16349334_16349930_16350030_16353026
transcript_57895.known	chr17	-	671	1	NIC	ENSG00000166582.11	novel	1770	5	NA	NA	1248	0	mono-exon	FALSE	NA	NA	NA	NA	NA	23	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAACCACTGTTAATATTT	-16348697	False	NA	-19	True	AATAAA	-25	NA	16348708	16348037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16348000_16348700
transcript_57896.known	chr17	-	554	2	FSM	ENSG00000166582.11	ENST00000472570.2	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1797	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGGTTTATCATTT	-16344731	False	NA	-19	True	AATAAA	-20	NA	16344742	16342533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16342942_16344596
transcript_57904.known	chr17	+	724	2	FSM	ENSG00000170315.14	ENST00000577640.1	724	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTCTGACTACAACATC	16380455	False	NA	NA	False	NA	NA	NA	16380930	16382526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381030_16381901
transcript_57905.known	chr17	+	477	2	FSM	ENSG00000170315.14	ENST00000578649.1	477	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTGTTTTGTCATGAAA	16283733	True	NA	24	True	AATAAA	-23	NA	16381094	16382745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381185_16382358
transcript_57906.known	chr17	+	1012	2	FSM	ENSG00000170315.14	ENST00000395839.5	1012	2	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	0	3449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283928	False	NA	19	True	AATAAA	-18	NA	16381289	16382740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381463_16381901
transcript_57907.known	chr17	+	1014	2	FSM	ENSG00000170315.14	ENST00000395837.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	0	1891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16377731	True	NA	19	True	AATAAA	-18	NA	16381340	16382740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381516_16381901
transcript_57908.known	chr17	+	933	2	FSM	ENSG00000170315.14	ENST00000302182.8	933	2	0	0	0	0	multi-exon	FALSE	canonical	3	6034	junction_1	0	43311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	16283729	True	NA	19	True	AATAAA	-18	NA	16381090	16382740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381185_16381901
transcript_57909.known	chr17	+	704	3	FSM	ENSG00000170315.14	ENST00000535788.1	704	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3017	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCATACTTGGTGTTTTGTC	16283729	True	NA	18	True	AATAAA	-17	NA	16381090	16382739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16381185_16381901_16382131_16382358
transcript_57911.known	chr17	+	2779	15	FSM	ENSG00000187688.15	ENST00000338560.12	2779	15	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_7	5.08749968660682	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	16415532	True	NA	15	True	AATATA	-17	NA	16415570	16437003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16415834_16417561_16417869_16420114_16420249_16422598_16422890_16423468_16423768_16426098_16426270_16426721_16426878_16427448_16427548_16428316_16428388_16428816_16428983_16431783_16431851_16431965_16432301_16433573_16433699_16434889_16434970_16436788
transcript_57912.known	chr17	+	483	2	FSM	ENSG00000187688.15	ENST00000493434.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTCTGGAAACATTATTT	NA	False	NA	15	True	AATATA	-17	NA	16434701	16437003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16434970_16436788
transcript_57915.known	chr17	+	1043	6	FSM	ENSG00000175061.19	ENST00000487066.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1495.64533228971	2024	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	NA	False	NA	-27	True	AATAAA	-20	NA	16438974	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439030_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441367
transcript_57922.known	chr17	+	904	5	FSM	ENSG00000175061.19	ENST00000663781.1	904	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	1388.21414054172	4374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369181	True	NA	-17	True	AATAAA	-30	NA	16439000	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439030_16439326_16439415_16440184_16440254_16441073_16441131_16441367
transcript_57927.known	chr17	+	793	4	FSM	ENSG00000175061.19	ENST00000658116.2	801	4	1	7	0	-5	multi-exon	FALSE	canonical	2	10	junction_1	1617.07190797304	1247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCAATTCTTGAAAATGT	16369218	True	NA	-34	True	AATAAA	-13	NA	16439037	16442011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16440184_16440254_16441073_16441131_16441367
transcript_57928.known	chr17	+	565	4	FSM	ENSG00000175061.19	ENST00000492250.5	565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1469.11454813965	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGATATATTTGGCAACTT	16369218	True	NA	NA	False	NA	NA	NA	16439037	16441502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439659_16439704_16440184_16440254_16441073
transcript_5793.known	chr1	+	2755	20	FSM	ENSG00000117859.19	ENST00000462759.5	2755	20	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_5	104.851563724689	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCATCTTTTATTATCTT	51721780	False	NA	20	True	CATAAA	-29	NA	51729903	51788469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_51730125_51745535_51745632_51746709_51746758_51748368_51748399_51750144_51750196_51760689_51760781_51761866_51761972_51765821_51765982_51772069_51772183_51772604_51772724_51776832_51776919_51781163_51781336_51782558_51782644_51783914_51784026_51784263_51784328_51784441_51784583_51785807_51785887_51786525_51786618_51787352_51787489_51787714
transcript_57935.known	chr17	+	1165	4	FSM	ENSG00000175061.19	ENST00000655540.1	1165	4	0	0	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	218.572642386919	4580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16441073_16441131_16441367
transcript_57936.known	chr17	+	1159	4	FSM	ENSG00000175061.19	ENST00000491009.6	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	486.548615819175	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369184	True	NA	-27	True	AATAAA	-20	NA	16439003	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441073
transcript_57937.known	chr17	+	897	4	FSM	ENSG00000175061.19	ENST00000580180.6	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	1066.95860588247	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	NA	False	NA	-17	True	AATAAA	-30	NA	16438981	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16440184_16440254_16441367
transcript_57938.known	chr17	+	1035	5	FSM	ENSG00000175061.19	ENST00000654778.1	1035	5	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_4	725.442063503351	1465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369190	True	NA	-27	True	AATAAA	-20	NA	16439009	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441367
transcript_57939.known	chr17	+	879	5	FSM	ENSG00000175061.19	ENST00000582911.6	885	5	0	6	0	-4	multi-exon	FALSE	canonical	0	0	junction_2	1404.50745370041	1383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAATTCTTGAAAATGTG	16369200	True	NA	-33	True	AATAAA	-14	NA	16439019	16442012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439394_16440184_16440254_16441073_16441131_16441367
transcript_57940.known	chr17	+	960	5	FSM	ENSG00000175061.19	ENST00000483140.7	965	5	0	5	0	5	multi-exon	FALSE	canonical	3	261	junction_2	794.402448384948	1435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAATGTGTATTTGAAGAA	16369217	True	NA	-22	True	AATAAA	-25	NA	16439036	16442023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441367
transcript_57941.known	chr17	+	993	6	FSM	ENSG00000175061.19	ENST00000481898.6	997	6	0	4	0	0	multi-exon	FALSE	canonical	3	222	junction_2	1300.5817160025	2355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369167	True	NA	-17	True	AATAAA	-30	NA	16438986	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_57942.known	chr17	+	1685	4	FSM	ENSG00000175061.19	ENST00000497774.6	1685	4	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_1	540.219914067924	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369191	True	NA	-27	True	AATAAA	-20	NA	16439010	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16440254_16441073_16441131_16441367
transcript_57943.known	chr17	+	973	5	FSM	ENSG00000175061.19	ENST00000477249.7	973	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	1400.42535948904	1635	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16440110_16440254_16441073_16441131_16441367
transcript_57944.known	chr17	+	1201	5	FSM	ENSG00000175061.19	ENST00000475953.6	1209	5	8	0	7	0	multi-exon	FALSE	canonical	3	222	junction_1	1448.64443101128	1796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369225	True	NA	-17	True	AATAAA	-30	NA	16439044	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16439659_16439704_16440184_16440254_16441073_16441131_16441367
transcript_57945.known	chr17	+	1300	5	FSM	ENSG00000175061.19	ENST00000653954.1	1300	5	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_2	1139.97442405521	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTCTTGAAAATGTGTATT	16369217	True	NA	-29	True	AATAAA	-18	NA	16439036	16442016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440184_16440254_16441073
transcript_57946.known	chr17	+	1057	3	FSM	ENSG00000175061.19	ENST00000470491.7	1108	3	22	29	3	-3	multi-exon	FALSE	canonical	3	455	junction_2	1263.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGGTCTTGGGTGTCAAT	16369239	True	NA	-46	True	AATAAA	-1	NA	16439058	16441999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16441367
transcript_57947.known	chr17	+	1149	6	FSM	ENSG00000175061.19	ENST00000484836.2	1149	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	1422.91354621425	1641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTATTTGAAGAAAAAGT	16369217	True	NA	-17	True	AATAAA	-30	NA	16439036	16442028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439527_16439704_16440110_16440254_16441073_16441131_16441367
transcript_57948.known	chr17	+	876	5	FSM	ENSG00000175061.19	ENST00000666215.2	879	5	3	0	0	0	multi-exon	FALSE	canonical	3	222	junction_2	803.507739539577	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439659_16439704_16440184_16440254_16441367
transcript_57949.known	chr17	+	1023	6	FSM	ENSG00000175061.19	ENST00000671170.1	1023	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	1309.35455855166	1372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439580_16439704_16440184_16440254_16441073_16441131_16441356
transcript_5795.known	chr1	-	3895	33	FSM	ENSG00000078618.23	ENST00000354831.11	3895	33	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	300.351238071258	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTTTGTATTTTATG	-51878751	False	NA	-3	True	AATAAA	-45	NA	51878805	51789190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51837486_51837621_51840225_51840515_51878274
transcript_57950.known	chr17	+	1178	5	FSM	ENSG00000175061.19	ENST00000480811.6	1178	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_2	1022.74908335329	1873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439704_16440184_16440254_16441073_16441131_16441367
transcript_57951.known	chr17	+	1371	2	FSM	ENSG00000175061.19	ENST00000654356.1	1371	2	0	0	0	0	multi-exon	FALSE	canonical	3	3483	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGAAATCACCCAAAATA	16369218	True	NA	-63	True	AAAAAG	-9	NA	16439037	16441228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16440254_16441073
transcript_57952.known	chr17	+	1061	6	FSM	ENSG00000175061.19	ENST00000662869.1	1061	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1364.53977589516	1875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTGAAAATGTGTATTTG	16369217	True	NA	-27	True	AATAAA	-20	NA	16439036	16442018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439061_16439326_16439415_16439531_16439704_16440184_16440254_16441073_16441131_16441367
transcript_57953.known	chr17	+	564	3	FSM	ENSG00000175061.19	ENST00000584141.5	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	2982	junction_1	250.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTTAAAACTCGCTTCA	16369217	True	NA	NA	False	AATAAA	-8	NA	16439036	16441190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16440184_16440254_16441073
transcript_57954.known	chr17	+	1016	5	FSM	ENSG00000175061.19	ENST00000481027.5	1016	5	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	1333.79315768975	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTACAATAAAGGATGGTC	16439234	False	NA	35	True	NA	NA	NA	16439320	16441987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16439415_16439527_16439704_16440184_16440254_16441073_16441131_16441367
transcript_57955.known	chr17	+	1930	3	FSM	ENSG00000175061.19	ENST00000659884.1	1930	3	0	0	0	0	multi-exon	FALSE	canonical	3	3396	junction_2	43.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTCTTGGGTGTCAATTCT	16369196	True	NA	-43	True	AATAAA	-4	NA	16439015	16442002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_16440254_16441073_16441131_16441367
transcript_57956.nic	chr17	-	1229	6	NIC	ENSG00000141040.15	novel	7639	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_5	21.6370053380776	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCAACCTTCAATCA	-16568530	True	NA	NA	False	AATAAA	-19	NA	16569204	16553109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567676_16568951
transcript_57958.known	chr17	-	7639	6	FSM	ENSG00000141040.15	ENST00000395825.4	7639	6	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_4	9.92773891679269	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATATGTACAAATGCGTG	-16568530	True	NA	NA	False	ATTAAA	-23	NA	16569204	16546953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16567328_16567930_16568951
transcript_57961.nnic	chr17	-	892	5	NIC	ENSG00000141040.15	novel	7639	6	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_4	26.4988207284777	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCAACCTTCAATCA	-16568540	True	NA	NA	False	AATAAA	-19	NA	16569214	16553109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_16553427_16563145_16563233_16563698_16563826_16566524_16566623_16568951
transcript_57963.known	chr17	-	436	2	FSM	ENSG00000141040.15	ENST00000498796.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCAGGGCAACCTTCAATCA	-16562590	False	NA	NA	False	AATAAA	-19	NA	16563264	16553109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_16553427_16563145
transcript_57969.known	chr17	+	3846	24	FSM	ENSG00000133030.22	ENST00000341712.8	3846	24	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	31.1831591406108	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCGGCCCCTCTCCTTCC	17042809	False	NA	79	True	ATTAAA	-13	NA	17042848	17185560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17042972_17075709_17075788_17078010_17078077_17126701_17126854_17131616_17131702_17136218_17136451_17137915_17138076_17142626_17142766_17143555_17143670_17146035_17146093_17147318_17147388_17150143_17150234_17154305_17154416_17158431_17159003_17161239_17161357_17171717_17171866_17172697_17172816_17173915_17174076_17175292_17175413_17176425_17176513_17177249_17177413_17180002_17180089_17180606_17180670_17184822
transcript_57970.known	chr17	-	1692	8	FSM	ENSG00000154803.13	ENST00000389169.9	1692	8	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	3.60272006083385	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCGTCCCAAGTTTTCCAT	-17233793	True	NA	-9	True	AATAAA	-14	NA	17237139	17221170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17221629_17222500_17222662_17223921_17224144_17226175_17226323_17227888_17228162_17231793_17231883_17232787_17232902_17236911
transcript_57976.known	chr17	-	1814	12	FSM	ENSG00000141030.13	ENST00000268717.10	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	664	junction_11	72.2685533385918	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	-17272636	True	NA	NA	False	AATAAA	-24	NA	17281246	17246615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17276034_17276165_17281131
transcript_57978.known	chr17	-	1625	12	FSM	ENSG00000141030.13	ENST00000578317.5	1625	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	293.756012774756	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGCTTGAACATTAATG	-17272581	True	NA	-33	True	ATTAAA	-17	NA	17281191	17246836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17268046_17270757_17270808_17270895_17271009_17276034_17276184_17281131
transcript_5798.known	chr1	-	3594	31	FSM	ENSG00000078618.23	ENST00000352171.12	3594	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	202.456700446183	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATGTGTATTTTAAAATG	-51860301	True	NA	-22	True	AATAAA	-26	NA	51878727	51789209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51840225_51840515_51878274
transcript_57982.nic	chr17	-	1523	11	NIC	ENSG00000141030.13	novel	1814	12	NA	NA	-31	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	228.148285112994	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCTTGAACATTAATGTG	-17272694	True	NA	-31	True	ATTAAA	-19	NA	17281304	17246834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_17247152_17247479_17247561_17248925_17249040_17254858_17254946_17260300_17260475_17261965_17262107_17264801_17264982_17267884_17267978_17270757_17270808_17270895_17271009_17281131
transcript_58.known	ERCC-00116	+	1977	1	FSM	ERCC-00116A	DQ668367	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00116_+_0_2000
transcript_58005.nnic	chr17	+	729	3	Intergenic	novelGene_16	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	8	junction_1	2	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTTTATCCAAGTATTTA	NA	False	NA	NA	False	AATAAA	-22	NA	17237414	17249173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr17_+_17237718_17246934_17247160_17248972
transcript_58010.known	chr17	-	636	1	FSM	ENSG00000215030.5	ENST00000392730.2	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1983	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTCCTGGGGACTTGGA	-17383959	False	NA	NA	False	AAAAAG	-44	NA	17384012	17383376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17383400_17384000
transcript_58011.known	chr17	+	2209	2	FSM	ENSG00000141026.6	ENST00000268711.4	2209	2	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAATGCTTTTTGTACTGA	17474178	True	NA	16	True	ATTAAA	-27	NA	17476999	17493221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17477266_17491278
transcript_58013.known	chr17	+	679	1	FSM	ENSG00000141026.6	ENST00000585041.1	679	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGGGGCCAACTTTTCA	17474184	True	NA	109	True	NA	NA	NA	17477005	17477684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_17477000_17477700
transcript_58024.known	chr17	-	1021	7	FSM	ENSG00000133027.18	ENST00000255389.10	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_6	31.0733898304571	1323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17587583	True	NA	-7	True	AATAAA	-17	NA	17591708	17505562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_58029.nic	chr17	-	1339	6	NIC	ENSG00000133027.18	novel	1021	7	NA	NA	-434	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_4	201.91721075728	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17592119	False	NA	-7	True	AATAAA	-17	NA	17592142	17505562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_17505849_17506226_17506302_17509433_17509546_17512508_17512655_17576919_17577028_17591530
transcript_58036.known	chr17	-	708	5	FSM	ENSG00000133027.18	ENST00000580147.5	708	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.191490510944	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCAATAAAGGCACCCTGA	-17587558	True	NA	-33	True	NA	NA	NA	17591683	17505588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17509433_17509546_17576919_17577028_17591530
transcript_58043.known	chr17	-	1050	8	FSM	ENSG00000133027.18	ENST00000395781.6	1050	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	249.277486560906	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATCTGCTCCAGCCTCTG	-17587583	True	NA	-9	True	AATAAA	-15	NA	17591708	17505564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226_17506302_17507168_17507200_17509433_17509546_17512508_17512655_17522279_17522396_17576919_17577028_17591530
transcript_58044.known	chr17	-	383	2	FSM	ENSG00000133027.18	ENST00000582268.5	383	2	0	0	0	0	multi-exon	FALSE	canonical	3	575	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTCCAGCCTCTGTC	-17506303	False	NA	-7	True	AATAAA	-17	NA	17506323	17505562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17505849_17506226
transcript_58045.known	chr17	-	5735	15	FSM	ENSG00000175662.18	ENST00000379504.8	5735	15	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.76166666071399	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCCTGTGTGGTCTGTT	-17971858	True	NA	NA	False	AATAAA	-17	NA	17972400	17843510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_17847784_17848822_17848860_17850892_17850953_17861475_17861552_17862730_17862849_17866295_17866420_17866875_17866925_17869339_17869474_17879626_17879744_17882704_17882864_17884633_17884769_17893660_17893811_17898595_17898675_17907446_17907532_17972261
transcript_58058.known	chr17	-	1553	8	FSM	ENSG00000171953.16	ENST00000474627.8	1553	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	83.3884443616814	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGTCTAAGCTGGTTGT	-18035247	True	NA	-9	True	NA	NA	NA	18039168	18018020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18018687_18021122_18021239_18021744_18021858_18024623_18024705_18026318_18026417_18028231_18028378_18028614_18028660_18038880
transcript_58059.known	chr17	-	567	2	FSM	ENSG00000171953.16	ENST00000467560.5	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGAGCCCTGTTTTCA	NA	False	NA	-19	True	ATTAAA	-20	NA	18021264	18018261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18018687_18021122
transcript_58060.known	chr17	+	4122	6	FSM	ENSG00000141034.10	ENST00000268719.9	4122	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	26.5887194125629	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGTCCTATTTGTAAACC	18036278	True	NA	22	True	AATAAA	-17	NA	18039407	18068405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18039903_18045146_18045207_18054126_18054235_18058867_18058970_18061844_18061976_18065179
transcript_58064.known	chr17	+	1900	13	FSM	ENSG00000108591.10	ENST00000225729.8	1900	13	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_11	15.5929114949354	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTTCAGACTGAGAAC	18084032	True	NA	9	True	AATAAA	-14	NA	18087947	18107969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093974_18098269_18098360_18099016_18099078_18099632_18099724_18100362_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_58069.known	chr17	+	2531	12	FSM	ENSG00000108591.10	ENST00000467099.6	2531	12	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	88.5072719615888	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTTCAGACTGAGAACA	18084052	True	NA	10	True	AATAAA	-15	NA	18087967	18107970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093969_18098269_18098360_18099016_18099094_18099632_18100436_18100568_18100660_18101492_18101591_18101920_18101998_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_58083.known	chr17	+	891	6	FSM	ENSG00000108591.10	ENST00000583355.1	891	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	89.6178553637611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGGGTCCCTGGAGGCT	18084091	True	NA	NA	False	NA	NA	NA	18088006	18107600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18088088_18093812_18093974_18103800_18103890_18104622_18104682_18106432_18106487_18107153
transcript_58090.known	chr17	+	1605	4	FSM	ENSG00000091542.9	ENST00000541285.1	1605	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	399.280463945945	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGGCGCCTGCCCCATCT	18182929	True	NA	NA	False	NA	NA	NA	18183077	18209398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18183266_18194954_18195036_18206814_18206971_18208218
transcript_58091.known	chr17	-	2158	2	FSM	ENSG00000266677.1	ENST00000583062.1	2158	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	18184753	18176564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18178366_18184396
transcript_58092.known	chr17	-	4181	30	FSM	ENSG00000177731.16	ENST00000327031.9	4181	30	0	0	0	0	multi-exon	TRUE	canonical	3	396	junction_19	144.883084604513	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCGCTAATTTTAACAAAA	-18244433	True	NA	NA	False	ATTAAA	-24	NA	18258738	18244814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168_18247358_18247656_18247849_18247928_18248034_18248549_18248722_18248799_18248884_18249126_18249202_18249325_18249409_18250837_18251018_18251264_18251478_18251679_18251817_18251998_18252147_18252471_18252557_18253300_18253459_18253543_18253720_18254078_18254183_18254520_18254683_18254768_18254855_18255182_18255264_18256525_18256598_18256908_18257020_18258627
transcript_58095.nic	chr17	-	1723	10	ISM	ENSG00000177731.16	ENST00000545457.6	3975	29	11268	-5	-19	0	3prime_fragment	FALSE	canonical	3	824	junction_9	111.868970973486	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGTATTTTTAATATTAAA	-18247441	False	NA	NA	False	ATTAAA	-25	NA	18247455	18244835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_18245273_18245353_18245420_18245554_18245661_18245743_18245851_18245933_18246063_18246161_18246223_18246307_18246463_18246593_18246829_18246912_18247053_18247168
transcript_58103.known	chr17	+	3236	4	FSM	ENSG00000177427.13	ENST00000323019.9	3236	4	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	5.79271573232759	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCATCTCAGTCTGTTTG	18259390	True	NA	NA	False	AATAAA	-31	NA	18260661	18266552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18260738_18262713_18262868_18263085_18263249_18263709
transcript_58110.known	chr17	-	913	4	FSM	ENSG00000177302.15	ENST00000472959.5	913	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	66.0824400948459	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGACCAGCCTGGGCAACAT	-18309557	True	NA	NA	False	NA	NA	NA	18314960	18306587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18306967_18308312_18308425_18308881_18308942_18314598
transcript_58111.known	chr17	-	727	4	FSM	ENSG00000177302.15	ENST00000583328.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	13.1233464566864	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAATTTAA	-18314755	False	NA	NA	False	NA	NA	NA	18314774	18306549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18306967_18308350_18308425_18308881_18308942_18314598
transcript_58114.known	chr17	-	474	2	FSM	ENSG00000177302.15	ENST00000580713.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGCTAATATA	-18314793	False	NA	NA	False	AATAAA	-29	NA	18314812	18308681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18308942_18314598
transcript_58120.known	chr17	-	2527	12	FSM	ENSG00000176974.21	ENST00000316694.8	2527	12	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_4	69.910095748778	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	-18357312	True	NA	-8	True	AATAAA	-19	NA	18363550	18327872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18335558_18335676_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_58129.known	chr17	-	1656	11	FSM	ENSG00000176974.21	ENST00000354098.7	1656	11	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	86.234621817458	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAACCTGGCTTTCTCACAG	-18357213	True	NA	-9	True	ATTAAA	-12	NA	18363451	18328527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18328920_18329277_18329389_18330554_18330672_18333165_18333289_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_58138.nnic	chr17	-	2300	10	NIC	ENSG00000176974.21	novel	2527	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	97	junction_3	101.810766124047	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTCATACTATGTGTT	NA	False	NA	-8	True	AATAAA	-19	NA	18363563	18327872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_18328920_18329277_18329389_18330554_18330672_18340042_18340256_18340731_18340814_18347495_18347657_18348324_18348441_18353671_18353818_18355885_18356001_18363371
transcript_58152.known	chr17	+	8297	2	FSM	ENSG00000176994.11	ENST00000406438.5	8297	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGGCTTCCTGATTACG	18312636	True	NA	11	True	AATAAA	-19	NA	18315292	18328056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18318150_18322616
transcript_58153.nic	chr17	+	999	3	ISM	ENSG00000214860.5	ENST00000399134.5	1979	11	5672	0	-2954	0	3prime_fragment	FALSE	canonical	2	2	junction_2	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCATGCCTTTTTGAACTC	18383435	True	NA	4	True	AATAAA	-17	NA	18383449	18389647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_18383588_18388218_18388289_18388856
transcript_58155.known	chr17	+	1871	2	FSM	ENSG00000220161.4	ENST00000577684.1	1871	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCCCACGGTTTGTAGTC	18411146	False	NA	NA	False	AATAAA	-14	NA	18411158	18414380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18412799_18414149
transcript_58156.nnic	chr17	+	440	2	NNC	ENSG00000220161.4	novel	1871	2	NA	NA	1128	2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACGGTTTGTAGTCAT	18412243	False	NA	NA	False	AATAAA	-16	NA	18412286	18414382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18412494_18414149
transcript_58157.known	chr17	-	689	3	FSM	ENSG00000154874.16	ENST00000450277.3	943	3	81	173	67	-173	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGCCAGGTGCCTGTA	-18625489	False	NA	NA	False	AATAAA	-13	NA	18625541	18620085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_18620266_18622498_18622570_18625103
transcript_58158.nnic	chr17	-	530	4	NNC	ENSG00000240445.6	novel	564	2	NA	NA	-6	5674	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.3260852434302	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGATTTTAATCTCCCTTC	-18681313	True	NA	NA	False	ATTAAA	-19	NA	18682320	18675076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_18675169_18680740_18680830_18681614_18681847_18682203
transcript_58163.known	chr17	+	1809	9	FSM	ENSG00000108448.23	ENST00000572555.5	1809	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.11551940828858	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGACGGAGTCTCGCACT	18697584	True	NA	NA	False	NA	NA	NA	18697997	18735667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18722236_18722333_18727524_18727759_18731069_18731236_18732038_18732135_18734876
transcript_58167.nnic	chr17	+	1175	8	NNC	ENSG00000108448.23	novel	576	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	6.34710282614945	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	18697564	True	NA	9	True	AATAAA	-16	NA	18697977	18736112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18718898_18719037_18735770
transcript_58170.nnic	chr17	+	1046	7	NNC	ENSG00000108448.23	novel	576	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	5.87839736284947	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	18697564	True	NA	9	True	AATAAA	-16	NA	18697977	18736112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18735761
transcript_58171.nnic	chr17	+	1037	7	NNC	ENSG00000108448.23	novel	576	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_6	5.87839736284947	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	18697564	True	NA	9	True	AATAAA	-16	NA	18697977	18736112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704618_18704766_18705062_18705165_18735770
transcript_58177.nnic	chr17	+	939	6	NNC	ENSG00000108448.23	novel	576	6	NA	NA	-20	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	5.81721582889959	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCTATGTGCCAGATACC	18697564	True	NA	9	True	AATAAA	-16	NA	18697977	18736112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_18698115_18699153_18699276_18701356_18701446_18704618_18704766_18705062_18705165_18735770
transcript_58178.known	chr17	+	815	5	FSM	ENSG00000108448.23	ENST00000449697.8	836	5	21	0	18	0	multi-exon	FALSE	canonical	0	0	junction_4	6.96419413859206	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATAGTTTAATCTATTTCCT	18697614	True	NA	NA	False	AATAAA	-23	NA	18698027	18704547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18698115_18699153_18699276_18699359_18699458_18701356_18701446_18704128
transcript_5818.nic	chr1	-	1467	3	ISM	ENSG00000078618.23	ENST00000354831.11	3895	33	21	47762	-13	3039	5prime_fragment	FALSE	canonical	3	72	junction_1	380	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAGTCCCAATCATT	-51860358	True	NA	NA	False	NA	NA	NA	51878784	51836952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_51837621_51840225_51840515_51878274
transcript_58183.known	chr17	+	1049	7	FSM	ENSG00000171928.14	ENST00000574294.5	1049	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_3	142.214235886879	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTTTGCATTTTGATCCA	NA	False	NA	NA	False	AATGAA	-26	NA	18781110	18805895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18781306_18789352_18789436_18790895_18790961_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_58187.known	chr17	+	1876	7	FSM	ENSG00000171928.14	ENST00000307767.13	1876	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	49.2375195692607	1306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18778981	True	NA	NA	False	TATAAA	-21	NA	18781182	18806714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18781306_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_58192.known	chr17	+	2989	7	FSM	ENSG00000171928.14	ENST00000476139.5	2989	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	110.38832969718	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGACATGTGTAATCTCAT	18779112	True	NA	NA	False	TATAAA	-21	NA	18781313	18806714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18782550_18789352_18789436_18790895_18791041_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_58194.known	chr17	+	718	6	FSM	ENSG00000171928.14	ENST00000571018.5	718	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	142.060550470565	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGGCTTTGTTTTTCCAC	NA	False	NA	NA	False	NA	NA	NA	18781142	18805661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18781306_18789352_18789436_18797578_18797669_18798811_18798944_18804137_18804267_18805540
transcript_58199.known	chr17	+	336	2	FSM	ENSG00000171928.14	ENST00000582288.1	336	2	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTTAATTCTGTGCTAT	18779085	True	NA	NA	False	TTTAAA	-30	NA	18781286	18789669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18781306_18789352
transcript_5822.known	chr1	-	1020	2	FSM	ENSG00000078618.23	ENST00000491410.1	1020	2	0	0	0	0	multi-exon	FALSE	canonical	3	832	junction_1	0	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAGCTATATCTCTCAGAGG	-51860345	True	NA	NA	False	TATAAA	-41	NA	51878771	51839991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51840515_51878274
transcript_58222.known	chr17	+	1958	12	FSM	ENSG00000141127.15	ENST00000268835.7	1958	12	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	70.6441437156847	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCATCAGCTTGTTTTCT	18852097	True	NA	35	True	AATAAA	-36	NA	18858130	18931287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18858262_18865468_18865565_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_58232.nnic	chr17	+	1843	11	NIC	ENSG00000141127.15	novel	1905	11	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	101.747186693294	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	NA	False	NA	16	True	AATAAA	-17	NA	18856298	18931268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_18856430_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_58234.known	chr17	+	1835	11	FSM	ENSG00000141127.15	ENST00000492129.5	1835	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	138.854204113523	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18855835	True	NA	16	True	AATAAA	-17	NA	18856349	18931268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18856430_18865468_18865565_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_5824.known	chr1	-	3149	31	FSM	ENSG00000078618.23	ENST00000485608.5	3149	31	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_20	283.948549721404	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGCAATGTGTATTTTAAAA	NA	False	NA	-24	True	AATAAA	-24	NA	51840454	51789211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51789434_51789567_51789658_51790532_51790650_51790899_51790991_51791577_51791662_51792045_51792099_51792376_51792425_51794471_51794611_51794822_51794855_51798248_51798412_51800555_51800684_51803813_51803965_51805509_51805562_51806793_51806914_51809314_51809402_51810280_51810405_51811993_51812099_51814034_51814090_51814550_51814610_51814692_51814814_51816311_51816390_51818065_51818136_51819799_51819874_51821497_51821556_51823663_51823787_51825286_51825383_51827795_51827870_51834016_51834171_51836130_51836213_51836368_51836439_51840225
transcript_58247.nic	chr17	+	1825	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	0	-53	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGTTTTGGCAATCGT	18852062	True	NA	31	True	AATAAA	-28	NA	18858095	18931215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_58248.nic	chr17	+	1878	11	NIC	ENSG00000141127.15	novel	1958	12	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_1	77.2207873567733	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACGCTGTGAATGTTGAAAT	18852062	True	NA	16	True	AATAAA	-17	NA	18858095	18931268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_18858262_18865801_18865953_18867281_18867335_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_5825.nnic	chr1	-	1738	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9684277300709	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	-51985035	True	NA	-4	True	ATTAAA	-17	NA	51990742	51907955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_51908843_51919926_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_5826.nnic	chr1	-	1051	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	-42	-9380	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9684277300709	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAACTCGGTGTCTCTTTTTT	-51985035	True	NA	NA	False	NA	NA	NA	51990742	51917335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_51917536_51919926_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_58260.known	chr17	+	1540	10	FSM	ENSG00000141127.15	ENST00000395656.6	1540	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	123.031261710285	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAAAAGTTAATAAAATAA	18852103	True	NA	NA	False	NA	NA	NA	18858136	18931024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_18858262_18865801_18865953_18872582_18872650_18877697_18877871_18882567_18882684_18889821_18889878_18911102_18911252_18923913_18923985_18928810_18928958_18930539
transcript_5827.nnic	chr1	-	964	6	NNC	ENSG00000169213.7	novel	12780	5	NA	NA	-42	-9467	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	82.9684277300709	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTTCCACTTTTGAGT	-51985035	True	NA	NA	False	ATTAAA	-21	NA	51990742	51917422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_51917536_51919926_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_58271.known	chr17	-	1988	5	FSM	ENSG00000154016.14	ENST00000284154.10	1988	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.11803398874989	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGACTGCTTTGGTGCTG	NA	False	NA	-5	True	AGTAAA	-44	NA	19046957	19020655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19022145_19024214_19024384_19035957_19036081_19041806_19041905_19046848
transcript_58273.known	chr17	+	428	3	FSM	ENSG00000230197.6	ENST00000435028.6	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19077782	19087878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19077914_19079987_19080121_19087714
transcript_58274.known	chr17	+	440	3	FSM	ENSG00000230197.6	ENST00000442355.6	440	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19077774	19087878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19077914_19079987_19080121_19087710
transcript_58276.nnic	chr17	+	733	4	NNC	ENSG00000228157.4	novel	556	3	NA	NA	-3531	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	3.09120616516523	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19089442	19096361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19089641_19093212_19093307_19093464_19093627_19096082
transcript_58278.nnic	chr17	+	1135	3	NNC	ENSG00000228157.4	novel	1176	2	NA	NA	-3531	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	0.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19089442	19094307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19089641_19093212_19093307_19093464
transcript_58279.known	chr17	+	556	3	FSM	ENSG00000228157.4	ENST00000399093.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	19093162	False	NA	NA	False	NA	NA	NA	19093191	19096361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19093307_19093464_19093627_19096082
transcript_5828.known	chr1	-	12780	5	FSM	ENSG00000169213.7	ENST00000371655.4	12780	5	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	31.3079462756662	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATTTGTAGAGTGACTC	-51984993	True	NA	-4	True	ATTAAA	-17	NA	51990700	51907955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_51920115_51933317_51933443_51937293_51937413_51976889_51977118_51990551
transcript_58281.nnic	chr17	-	730	4	NNC	ENSG00000197665.7	novel	553	3	NA	NA	-3531	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	2.05480466765633	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19162642	19155726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_19156006_19158461_19158621_19158778_19158873_19162444
transcript_58283.nnic	chr17	-	1132	3	NNC	ENSG00000197665.7	novel	1173	2	NA	NA	-3531	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	1.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19162642	19157780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_19158621_19158778_19158873_19162444
transcript_58285.known	chr17	-	553	3	FSM	ENSG00000197665.7	ENST00000399087.2	553	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19158893	19155726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19156006_19158461_19158621_19158778
transcript_58286.known	chr17	-	428	3	FSM	ENSG00000266311.6	ENST00000460772.6	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19174428	19164208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19164373_19171958_19172092_19174297
transcript_58288.known	chr17	-	440	3	FSM	ENSG00000266311.6	ENST00000495691.2	440	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	NA	False	NA	NA	False	AATAAA	-16	NA	19174436	19164208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19164377_19171958_19172092_19174297
transcript_58290.known	chr17	+	428	3	FSM	ENSG00000236022.6	ENST00000424109.6	428	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	19203741	False	NA	NA	False	AATAAA	-16	NA	19203832	19214045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19203964_19206169_19206303_19213881
transcript_58291.known	chr17	+	440	3	FSM	ENSG00000236022.6	ENST00000428348.6	440	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATTGTGATTTGTTTTCC	19203733	False	NA	NA	False	AATAAA	-16	NA	19203824	19214045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19203964_19206169_19206303_19213877
transcript_58293.nnic	chr17	+	727	4	NNC	ENSG00000281856.1	novel	536	3	NA	NA	-3528	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.35702260395516	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19215614	19222527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19215810_19219381_19219476_19219633_19219793_19222248
transcript_58296.nnic	chr17	+	1129	3	NNC	ENSG00000281856.1	novel	1173	2	NA	NA	-3528	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	2.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGGGAGCGATGCTGCAA	NA	False	NA	NA	False	AATAAA	-18	NA	19215614	19220473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_19215810_19219381_19219476_19219633
transcript_58298.known	chr17	+	536	3	FSM	ENSG00000281856.1	ENST00000628484.1	536	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGCCAAGTATGTGCTG	NA	False	NA	NA	False	NA	NA	NA	19219377	19222527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19219476_19219633_19219793_19222248
transcript_58303.known	chr17	+	3149	7	FSM	ENSG00000166484.20	ENST00000308406.9	3149	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	76.1985709985576	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCCAGGTGTAATTTTTGG	NA	False	NA	12	True	AATACA	-20	NA	19377720	19383543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378102_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_58304.known	chr17	+	3059	7	FSM	ENSG00000166484.20	ENST00000395602.8	3059	7	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	47.1925723910966	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19378213	True	NA	13	True	AATACA	-21	NA	19378252	19383544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378543_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_58305.known	chr17	+	2902	7	FSM	ENSG00000166484.20	ENST00000395604.8	2902	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	61.4367334924491	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19374725	True	NA	13	True	AATACA	-21	NA	19378497	19383544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378631_19378895_19379133_19379781_19379948_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_58312.nic	chr17	-	838	7	NIC	ENSG00000108641.20	novel	744	7	NA	NA	-12	0	combination_of_known_junctions	TRUE	canonical	3	18	junction_6	82.4439203337638	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTAGGCCTGGGGCT	-19360991	True	NA	-12	True	AATAAA	-13	NA	19362745	19343178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362599
transcript_58313.known	chr17	-	744	7	FSM	ENSG00000108641.20	ENST00000642870.2	744	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	86.7006343690748	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGAGCCTAGGCCTGGGGCT	-19377427	False	110	-12	True	AATAAA	-13	NA	19377910	19343178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343462_19343789_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19377858
transcript_58315.known	chr17	-	593	6	FSM	ENSG00000108641.20	ENST00000575478.7	593	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	89.8318429066219	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGTTGGGGTGAAT	-19360967	True	NA	NA	False	NA	NA	NA	19362721	19343727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19343858_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362599
transcript_58320.known	chr17	-	1820	6	FSM	ENSG00000166482.12	ENST00000299610.5	1820	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_5	8.01498596380555	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATTGTTCAGGGGGAGTTG	-19386707	True	NA	-2	True	AATAAA	-17	NA	19387190	19383444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387149
transcript_58335.known	chr17	+	699	3	FSM	ENSG00000166484.20	ENST00000571657.5	699	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	130	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGCAGGTTCATCTCAG	19377710	False	NA	NA	False	NA	NA	NA	19377798	19383339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378102_19382812_19382947_19383077
transcript_58339.known	chr17	-	755	6	FSM	ENSG00000108641.20	ENST00000268841.10	755	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	97.3192683901806	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGTATGAGTCAGACACCT	-19360915	True	NA	-14	True	ATTAAA	-23	NA	19362669	19346945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19347197_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_58340.known	chr17	-	601	6	FSM	ENSG00000108641.20	ENST00000440841.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	89.3657652571722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGCAGTATGAGTCAGAC	-19360788	False	NA	-18	True	ATTAAA	-19	NA	19362542	19346949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19347174_19347268_19347332_19347783_19347881_19357839_19357952_19360319_19360389_19362506
transcript_58341.known	chr17	+	2715	5	FSM	ENSG00000166484.20	ENST00000299612.11	2715	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	102.720494547096	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGGTGTAATTTTTGGA	19377664	True	NA	13	True	AATACA	-21	NA	19377752	19383544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19378102_19380607_19381687_19381780_19382467_19382812_19382947_19383077
transcript_58342.known	chr17	-	1932	6	FSM	ENSG00000166482.12	ENST00000395592.6	1932	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	22.1503950303375	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTCAGGGGGAGTTGGGG	-19386707	True	NA	1	True	AATAAA	-20	NA	19387190	19383441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19384710_19385098_19385282_19385357_19385455_19386309_19386465_19386759_19386839_19387040
transcript_58345.known	chr17	-	883	1	FSM	ENSG00000189343.7	ENST00000458332.1	883	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	729	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	-19445837	False	NA	NA	False	NA	NA	NA	19446852	19445969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19446000_19446900
transcript_5835.nic	chr1	-	924	4	ISM	ENSG00000169213.7	ENST00000371655.4	12780	5	-42	25101	-42	-25101	5prime_fragment	FALSE	canonical	3	193	junction_3	16.4991582276861	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTTTTTACCAGTTC	-51985035	True	NA	NA	False	AATAAA	-16	NA	51990742	51933056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_51933443_51937293_51937413_51976889_51977118_51990551
transcript_58350.known	chr17	+	3709	12	FSM	ENSG00000072210.19	ENST00000472059.6	3709	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	238.705911943325	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGGTATTTGTCAACTTT	19648677	False	NA	24	True	TATAAA	-21	NA	19648850	19677595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19655280_19655388_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675495_19675500_19675561
transcript_58352.known	chr17	+	3183	11	FSM	ENSG00000072210.19	ENST00000581518.6	3183	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	156.867332481942	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTCTATGCCTTGGAGCTC	NA	False	NA	NA	False	NA	NA	NA	19648135	19677130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19648266_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_58355.known	chr17	+	3828	11	FSM	ENSG00000072210.19	ENST00000339618.8	3828	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	195.273654136957	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19640089	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19673150_19673276_19675557
transcript_58357.known	chr17	+	1708	11	FSM	ENSG00000072210.19	ENST00000672357.1	1708	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	151.924619466366	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATATGCAAAC	19648684	False	NA	-76	True	AATGAA	-28	NA	19648722	19675664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19648844_19648934_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_58359.known	chr17	+	3583	11	FSM	ENSG00000072210.19	ENST00000579855.5	3583	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	157.652434170868	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTATTTGTCAACTTTTTT	19640089	True	NA	27	True	TATAAA	-24	NA	19648750	19677598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19648831_19648952_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_5836.known	chr1	-	1708	1	FSM	ENSG00000198841.4	ENST00000371614.2	1708	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	188	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAATCTCTTTCACTTAA	-52032545	True	NA	-4	True	AATAAA	-19	NA	52033810	52032102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52032100_52033800
transcript_58360.known	chr17	+	3703	10	FSM	ENSG00000072210.19	ENST00000176643.11	3703	10	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_9	81.0442646922419	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTATTTGTCAACTTTT	19640089	True	NA	25	True	TATAAA	-22	NA	19648750	19677596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_58364.known	chr17	+	2060	10	FSM	ENSG00000072210.19	ENST00000671878.1	2060	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	162.663554918628	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19640119	True	NA	NA	False	NA	NA	NA	19648780	19685700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19685274
transcript_5837.known	chr1	-	1416	7	FSM	ENSG00000117862.13	ENST00000371626.9	1416	7	0	0	0	0	multi-exon	TRUE	canonical	3	1154	junction_1	115.853355583686	3643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTGATGGCCTTTTT	-52041163	True	NA	-5	True	AATAAA	-15	NA	52055191	52020130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52021013_52023490_52023575_52024509_52024580_52027274_52027349_52028577_52028631_52041536_52041598_52054999
transcript_58372.known	chr17	+	1558	9	FSM	ENSG00000072210.19	ENST00000630662.2	1558	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_8	172.528937790157	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACGTCCCAACATTCCC	19640144	False	NA	2	True	AATAAA	-13	NA	19648805	19675742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19675557
transcript_58373.known	chr17	+	1524	9	FSM	ENSG00000072210.19	ENST00000672567.1	1524	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_8	174.901356126818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTGTTCTGGTGTTTAT	19649063	False	NA	NA	False	NA	NA	NA	19649080	19685700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19664947_19665048_19685274
transcript_58375.known	chr17	+	3822	9	FSM	ENSG00000072210.19	ENST00000631291.2	3822	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	159.282718381499	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATAGATGGTATTTGTCA	19648487	False	NA	19	True	TATAAA	-16	NA	19648525	19677590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19656365_19656575_19657744_19657863_19661126_19661269_19663332_19663500_19671720_19671957_19675557
transcript_58381.known	chr17	+	3276	8	FSM	ENSG00000072210.19	ENST00000395575.7	3276	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	183.917572486665	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGGAGACAATCCTTTGA	19640124	True	NA	-40	True	NA	NA	NA	19648785	19677531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_19649125_19651546_19651779_19652546_19652633_19661126_19661269_19663332_19663500_19664947_19665048_19671720_19671957_19675557
transcript_58398.known	chr17	-	1925	10	FSM	ENSG00000108602.18	ENST00000457500.6	1925	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.19988776369148	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATGCAGGCATATGGCAC	NA	False	NA	-2	True	AATAAA	-27	NA	19745459	19737987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19738236_19738322_19738454_19738995_19739096_19739507_19739675_19740335_19740478_19741092_19741211_19742003_19742213_19742544_19742631_19743231_19743464_19744967
transcript_58399.known	chr17	-	3908	28	FSM	ENSG00000083290.20	ENST00000361658.6	3908	28	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_1	7.93180813225544	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTAAGTGTTCCTGTTTG	-19867672	True	NA	-1	True	AATAAA	-22	NA	19867936	19770829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19771068_19776308_19776408_19777580_19777717_19780471_19780630_19780985_19781105_19781888_19782068_19783696_19783906_19785936_19786087_19795621_19795726_19796094_19796283_19797395_19797683_19799494_19799576_19801776_19801923_19804692_19804831_19810377_19810439_19816748_19816921_19825093_19825183_19826138_19826187_19838500_19838584_19841488_19841548_19843120_19843223_19845303_19845378_19846736_19846911_19849368_19849406_19849741_19849775_19864802_19864845_19865735_19865829_19867327
transcript_58400.known	chr17	-	4063	15	FSM	ENSG00000108599.15	ENST00000225737.11	4063	15	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_6	12.969351627304	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGACTCGGCTACTTTT	-19974272	True	NA	NA	False	TATAAA	-16	NA	19977828	19904301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19931804_19931979_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_58402.known	chr17	-	1815	14	FSM	ENSG00000108599.15	ENST00000395536.7	1815	14	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	38.0445083472584	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCAAAACTTGAGATAAAGG	-19977667	False	NA	NA	False	NA	NA	NA	19977679	19906226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19906233_19909180_19909277_19909925_19909979_19920035_19920119_19924407_19924518_19936285_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_58404.nic	chr17	-	1935	9	ISM	ENSG00000108599.15	ENST00000395536.7	1815	14	-184	29775	-35	0	5prime_fragment	FALSE	canonical	3	127	junction_5	10.0428768288773	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAGAAAAAC	-19974307	True	NA	NA	False	AATAAA	-12	NA	19977863	19936001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_19936431_19939712_19939850_19940886_19941011_19941825_19941911_19947406_19947506_19958013_19958572_19962839_19963023_19968413_19968462_19977591
transcript_58406.known	chr17	-	564	4	FSM	ENSG00000108599.15	ENST00000571858.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	71.4282857137143	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCTCATTTTGGTGACCTGG	-19974272	True	NA	NA	False	NA	NA	NA	19977828	19962859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_19963023_19967918_19968035_19968413_19968462_19977591
transcript_58407.known	chr17	+	3754	13	FSM	ENSG00000128487.19	ENST00000680373.1	3754	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	67.4596587269425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	20149763	True	NA	-43	True	NA	NA	NA	20156050	20314700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_58408.known	chr17	+	2167	12	FSM	ENSG00000128487.19	ENST00000681731.1	2167	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	67.6647056942851	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAACAAAACAC	20149770	True	NA	-43	True	NA	NA	NA	20156057	20314700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232415_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_58411.known	chr17	+	2536	6	FSM	ENSG00000128487.19	ENST00000395525.7	2536	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_5	85.1694781010193	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTACAAGTCTTATGAAAAGT	20149801	True	NA	NA	False	AATAAA	-23	NA	20156088	20237179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_58412.known	chr17	+	3081	5	FSM	ENSG00000128487.19	ENST00000679740.1	3081	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	92.3752537208965	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGACGTGTGAAGAAAAA	20149770	True	NA	NA	False	NA	NA	NA	20156057	20239273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20227412_20227621_20231757_20231832_20232199_20232406_20236859
transcript_58413.known	chr17	+	8133	13	FSM	ENSG00000128487.19	ENST00000395530.6	8133	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	39.3463961359727	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTCTCACTGACATTT	20149701	True	NA	NA	False	AATAAA	-20	NA	20155988	20319026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20156237_20204332_20205913_20227412_20227621_20231757_20231832_20232199_20232406_20245925_20246072_20247218_20247320_20253504_20253587_20257450_20257608_20260191_20260295_20296960_20297078_20306022_20306083_20313975
transcript_58415.known	chr17	-	1184	1	FSM	ENSG00000261033.1	ENST00000564549.1	1184	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTCTTTTTTTTTTAAAT	-20009175	True	NA	NA	False	AATAAA	-36	NA	20009234	20008050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_20008000_20009200
transcript_58418.nnic	chr17	-	481	2	Genic_Genomic	ENSG00000260907.1	novel	840	1	NA	NA	-1320	-6	multi-exon	FALSE	canonical	2	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCACGGTTTGTAGTCAT	-20532162	True	NA	NA	False	AATAAA	-16	NA	20532201	20530047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_-_20530281_20531953
transcript_58419.known	chr17	-	840	1	FSM	ENSG00000260907.1	ENST00000563569.1	840	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGTTTGTAGTCATTTGTTC	-20530860	False	NA	NA	False	AATAAA	-22	NA	20530881	20530041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_20530000_20530900
transcript_58426.nic	chr17	+	1802	5	NIC	ENSG00000233098.10	novel	1488	4	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_1	47.8297762905076	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862682	True	NA	NA	False	AATAAA	-29	NA	20868435	20930046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358_20924834_20929430
transcript_58437.nic	chr17	+	1568	4	FSM	ENSG00000233098.10	ENST00000692309.1	1488	4	-75	-5	-21	0	multi-exon	FALSE	canonical	3	78	junction_2	37.9502598439355	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	NA	False	NA	NA	False	AATAAA	-29	NA	20868411	20930046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20892229_20892433_20924358_20924834_20929430
transcript_58441.known	chr17	+	3727	4	FSM	ENSG00000233098.10	ENST00000577537.5	3727	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	31.6789449880446	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	20862679	True	NA	NA	False	AATAAA	-20	NA	20868432	20905230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20902217
transcript_58445.known	chr17	+	709	4	FSM	ENSG00000233098.10	ENST00000417232.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	17.1464281994822	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATACAATGAAAAGGAAAAAA	20862751	True	NA	NA	False	NA	NA	NA	20868504	20924425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20887591_20887850_20892229_20892433_20924358
transcript_58449.nnic	chr17	+	1381	4	NNC	ENSG00000233098.10	novel	1488	4	NA	NA	15	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	61.6999909958574	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862704	True	NA	NA	False	AATAAA	-29	NA	20868457	20930046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_20868686_20892370_20892433_20924358_20924834_20929430
transcript_58450.known	chr17	+	1257	3	FSM	ENSG00000233098.10	ENST00000443508.8	1293	3	36	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	56.5	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATCTGAATGTGATCTCT	20862766	True	NA	NA	False	AATAAA	-29	NA	20868519	20930046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20924358_20924834_20929430
transcript_58454.known	chr17	+	3382	3	FSM	ENSG00000233098.10	ENST00000583962.2	3382	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	24.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTTGATCTTTGTGGG	20862766	True	NA	NA	False	AATAAA	-20	NA	20868519	20905230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_20868686_20892229_20892433_20902217
transcript_58470.known	chr17	+	1910	1	FSM	ENSG00000109016.18	ENST00000581020.1	1910	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	21125251	True	NA	NA	False	NA	NA	NA	21126963	21128873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_21127000_21128900
transcript_58473.known	chr17	-	1246	3	FSM	ENSG00000178307.10	ENST00000577419.5	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_2	2	1086	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTCCCGCTGTTCTCTC	-21204753	True	NA	-9	True	ATTAAA	-13	NA	21214161	21197957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21198841_21210935_21211228_21214090
transcript_58474.known	chr17	-	958	2	FSM	ENSG00000178307.10	ENST00000317635.6	958	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	4384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCCGCTGTTCTCTCTTTC	-21204753	True	NA	-5	True	ATTAAA	-17	NA	21214161	21197953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_21198841_21214090
transcript_58476.known	chr17	+	1152	2	FSM	ENSG00000235530.7	ENST00000580291.5	1152	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTGCTGGGTCAGAGTGT	21214116	True	NA	NA	False	AATAAA	-23	NA	21214330	21219120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_21214451_21218088
transcript_58483.known	chr17	+	1421	4	FSM	ENSG00000263563.7	ENST00000648259.1	1421	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	282	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATACTTGGTGTTTTGTCA	22090723	False	NA	NA	False	AATAAA	-18	NA	22090742	22205151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_22090909_22181538_22181606_22183106_22183230_22204086
transcript_58484.known	chr17	+	371	1	FSM	ENSG00000239223.3	ENST00000475295.1	371	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	286	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAAAATGAAACTTTTTT	NA	False	NA	NA	False	NA	NA	NA	27274106	27274477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27274100_27274500
transcript_5849.known	chr1	+	2159	5	FSM	ENSG00000134717.18	ENST00000472944.6	2159	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	480.551245966546	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTGTGTACAGAATTTCC	52037662	True	NA	42	True	NA	NA	NA	52056303	52088418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52056380_52064824_52064939_52083339_52083542_52086111_52086172_52086711
transcript_58490.known	chr17	+	1611	7	FSM	ENSG00000109046.15	ENST00000348811.6	1611	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	252.174983339391	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTAGCCAGGCGTGGTG	27281874	True	NA	NA	False	AATACA	-10	NA	27294130	27312887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_58493.known	chr17	+	4187	9	FSM	ENSG00000109046.15	ENST00000467843.6	4187	9	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_5	107.142136902341	545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTATATTGCAAATGTTTC	27281836	True	NA	38	True	ATTAAA	-20	NA	27294092	27313631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27307743_27309273_27310060_27310175_27311508_27311617_27312209
transcript_58494.known	chr17	+	5105	9	FSM	ENSG00000109046.15	ENST00000262394.7	5105	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_5	145.232518311155	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGCTCGTCATAACCTTGG	27281857	True	NA	9	True	AATAAA	-15	NA	27294113	27315926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787_27301957_27303366_27303636_27304779_27304912_27306781_27306883_27309099_27309273_27310060_27310175_27311508_27311617_27312209
transcript_58495.known	chr17	+	544	2	FSM	ENSG00000109046.15	ENST00000584354.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	463	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTCAGTGTAGGGTAATAA	27281857	True	NA	NA	False	NA	NA	NA	27294113	27302009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_27294436_27301787
transcript_58497.nnic	chr17	+	389	3	NNC	ENSG00000266313.2	novel	642	4	NA	NA	12379	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	2	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAGATTGGCAAAAATTAAA	27345620	True	NA	NA	False	AATAAA	-19	NA	27345674	27348491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_27345782_27346927_27347063_27348344
transcript_58508.nnic	chr17	-	720	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.0369800568452	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893038	False	NA	2	True	AGTAAA	-18	NA	27893383	27878357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_27878774_27880273_27880367_27882568_27882713_27893316
transcript_58509.nnic	chr17	-	1485	4	NNC	ENSG00000232859.10	novel	1419	4	NA	NA	3111	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_3	10.6144555520604	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27888865	False	345	2	True	AGTAAA	-18	NA	27889210	27878357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_27879491_27880273_27880367_27882568_27882713_27889095
transcript_58510.known	chr17	-	1419	4	FSM	ENSG00000232859.10	ENST00000379102.8	1419	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	10.6144555520604	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893020	True	NA	2	True	AGTAAA	-18	NA	27893365	27878357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_27879491_27880273_27880367_27882568_27882713_27893316
transcript_58517.known	chr17	-	2196	3	FSM	ENSG00000232859.10	ENST00000460380.6	2196	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGTGTGTCTTCTCAACT	-27893014	True	NA	2	True	AGTAAA	-18	NA	27893359	27878357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_27880367_27882568_27882713_27893316
transcript_58522.known	chr17	+	1503	2	FSM	ENSG00000087095.13	ENST00000582037.2	1503	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATGCGTCTCTTTGGGTTT	28042827	False	NA	18	True	AATAAA	-29	NA	28042838	28048926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28043332_28047916
transcript_58523.known	chr17	+	695	3	FSM	ENSG00000087095.13	ENST00000583517.1	695	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTGTTTTATTCTTGGGG	28039384	True	NA	NA	False	NA	NA	NA	28041736	28048324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28041780_28043087_28043332_28047916
transcript_58528.known	chr17	-	787	6	FSM	ENSG00000109083.14	ENST00000579419.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	73.4885025020921	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-28333130	True	NA	-3	True	AATAAA	-18	NA	28335439	28328325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328658_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_58529.known	chr17	-	852	6	FSM	ENSG00000109083.14	ENST00000585313.5	852	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	67.2577133123035	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCAAATGGCTTGATGTA	-28333130	True	NA	-14	True	AATAAA	-7	NA	28335439	28328336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332182_28335339
transcript_58542.known	chr17	+	2463	3	FSM	ENSG00000109084.14	ENST00000226230.8	2463	3	0	0	0	0	multi-exon	TRUE	canonical	3	855	junction_2	5.5	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTCTGCTTCTACTTT	28303163	True	NA	20	True	AATAAA	-17	NA	28319199	28328685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28319366_28325502_28325648_28326533
transcript_58549.known	chr17	+	1075	2	FSM	ENSG00000109084.14	ENST00000582384.1	1075	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGAGTGTATCACCTGT	28303232	False	NA	NA	False	ACTAAA	-17	NA	28319268	28327511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28319366_28326533
transcript_58552.known	chr17	-	1071	6	FSM	ENSG00000109083.14	ENST00000585089.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_5	46.2990280675523	760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTTGATGTACCTTTTTT	-28333140	True	NA	-6	True	AATAAA	-15	NA	28335449	28328328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28332145_28332383_28335339
transcript_58553.known	chr17	-	860	5	FSM	ENSG00000109083.14	ENST00000395418.8	860	5	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	31.6889176211495	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGATGTACCTTTTTTCCT	-28333163	True	NA	-3	True	AATAAA	-18	NA	28335472	28328325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330442_28330529_28331858_28331988_28335339
transcript_58554.known	chr17	-	974	6	FSM	ENSG00000109083.14	ENST00000357896.7	974	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	73.1491626746335	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATGTACCTTTTTTCC	-28333160	True	NA	-4	True	AATAAA	-17	NA	28335469	28328326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28329172_28329277_28330110_28330229_28330442_28330529_28331858_28331988_28335339
transcript_58555.known	chr17	-	774	4	FSM	ENSG00000109083.14	ENST00000588477.5	774	4	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	59.9796261705219	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGATGTACCTTTTTTCCTG	-28333180	True	NA	-2	True	AATAAA	-19	NA	28335489	28328324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28328734_28330442_28330529_28331858_28331988_28335339
transcript_58556.known	chr17	-	2670	11	FSM	ENSG00000004142.12	ENST00000540200.6	2670	11	0	0	0	0	multi-exon	FALSE	canonical	3	837	junction_2	44.9706570999357	1370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGTGAGTTCAATGTTA	-28340604	True	NA	-8	True	ATTAAA	-14	NA	28357527	28346632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28348232_28349082_28349163_28350437_28350564_28350765_28350793_28351663_28351801_28352911_28353020_28353240_28353317_28353694_28353792_28354487_28354586_28355794_28355877_28357287
transcript_58559.known	chr17	+	3570	7	FSM	ENSG00000109079.10	ENST00000226225.7	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_5	9.46337971105226	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTACAGAGCCATGTTTAC	28334560	True	NA	6	True	AATAAA	-17	NA	28335760	28347009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28335857_28339407_28339727_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_58563.known	chr17	+	1656	6	FSM	ENSG00000109079.10	ENST00000544907.6	1656	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	47.6042014952462	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAGAATCAATCTGAG	28335583	False	NA	NA	False	NA	NA	NA	28335601	28345255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28335857_28340308_28340479_28341236_28341327_28341403_28341457_28342246_28342443_28344363
transcript_58564.known	chr17	+	674	7	FSM	ENSG00000244045.13	ENST00000555264.6	674	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	111.672761027726	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCGCCTCTGTGGTGGGTCT	28354781	True	NA	NA	False	NA	NA	NA	28357641	28361177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360150_28360239_28360528_28360577_28360734_28360848_28361156
transcript_58572.known	chr17	+	3082	6	FSM	ENSG00000244045.13	ENST00000292114.8	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	9.54148835350125	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTATCTTTGCTTCAT	28354786	True	NA	19	True	ATTAAA	-16	NA	28357646	28363683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361156
transcript_58576.nnic	chr17	+	997	6	NNC	ENSG00000244045.13	novel	3082	6	NA	NA	-44	612	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_5	85.7242089493977	80	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTATTTTAACTCCTGTG	NA	False	NA	24	True	AATAAA	-21	NA	28357597	28362067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_28357882_28358915_28358990_28359314_28359405_28360528_28360572_28360734_28360848_28361674
transcript_5858.known	chr1	+	794	5	FSM	ENSG00000134717.18	ENST00000489308.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	329	junction_3	441.67550305626	597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTACTTTTCTTTTCCC	52037629	True	NA	9	True	AATAAA	-14	NA	52056270	52087155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52056380_52059834_52059902_52064824_52064939_52086111_52086172_52086711
transcript_58582.known	chr17	+	493	2	FSM	ENSG00000265254.1	ENST00000580714.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGTGTCTGGTATATTCAA	NA	False	NA	29	True	AAAAAG	-11	NA	28405239	28406796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28405452_28406515
transcript_58584.nnic	chr17	+	625	2	Genic_Genomic	ENSG00000263266.2	novel	585	1	NA	NA	-47	47	multi-exon	FALSE	canonical	0	0	junction_1	0	2808	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATGAGTATTGTTGAGGC	NA	False	NA	NA	False	AATAAA	-29	NA	28467774	28468453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr17_+_28468059_28468112
transcript_5859.known	chr1	+	608	3	FSM	ENSG00000134717.18	ENST00000524414.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	1199	junction_1	76.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCACCCTAGCTGGAATG	52037672	True	NA	NA	False	NA	NA	NA	52056313	52065299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52056380_52059834_52059902_52064824
transcript_58591.nnic	chr17	-	634	2	Antisense	novelGene_ENSG00000263266.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	2405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCTTTTTTAAAAC	NA	False	NA	NA	False	NA	NA	NA	28468454	28467777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_28468263_28468305
transcript_58593.known	chr17	+	585	1	FSM	ENSG00000263266.2	ENST00000571702.1	585	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	96959	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ACAAAAATGACTAAATAAAA	28466471	False	NA	NA	False	NA	NA	NA	28467821	28468406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28467800_28468400
transcript_58598.known	chr17	-	1379	5	FSM	ENSG00000109103.12	ENST00000335765.9	1379	5	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	38.8546972707291	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-28548011	True	NA	-6	True	AATAAA	-18	NA	28552624	28546707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28547410_28547676_28547850_28547998_28548102_28548591_28548706_28552337
transcript_58599.known	chr17	-	1653	4	FSM	ENSG00000109103.12	ENST00000301032.8	1653	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	19.3045763140937	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGTGTGGCCAGCCTCT	-28548018	True	NA	-6	True	AATAAA	-18	NA	28552631	28546707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28547850_28547998_28548102_28548591_28548706_28552337
transcript_5860.known	chr1	-	5338	25	FSM	ENSG00000154222.15	ENST00000284376.8	5338	25	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_12	7.97870429469737	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGAAGTCTTGCTTACAA	-52363870	True	NA	-2	True	AATAAA	-20	NA	52366205	52350596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52353224_52353517_52353648_52354607_52354699_52354839_52354940_52355397_52355450_52355607_52355667_52355770_52355845_52356185_52356303_52356383_52356443_52357000_52357127_52357525_52357699_52357780_52357899_52358330_52358462_52358685_52358759_52359026_52359158_52359249_52359358_52359458_52359535_52359704_52359884_52360073_52360234_52360423_52360550_52360973_52361133_52361512_52361617_52362601_52362747_52364551_52364635_52366068
transcript_58600.known	chr17	-	2529	12	FSM	ENSG00000087111.21	ENST00000308360.8	2529	12	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_11	30.4335069800941	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571513	False	3282	-5	True	AATAAA	-29	NA	28571524	28553386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048_28571189_28571462
transcript_58602.known	chr17	-	2815	11	FSM	ENSG00000087111.21	ENST00000395346.6	2815	11	0	0	0	0	multi-exon	FALSE	canonical	3	322	junction_2	23.7573146630675	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGTCTGAGCTCTACTCT	-28571525	False	3282	-5	True	AATAAA	-29	NA	28571536	28553386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571048
transcript_58608.known	chr17	-	2397	11	FSM	ENSG00000087111.21	ENST00000268758.13	2397	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_10	103.707714274301	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGAGCTCTACTCTTTCT	-28571517	False	3282	-1	True	AATAAA	-33	NA	28571528	28553382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28554496_28554850_28555062_28556165_28556267_28556826_28556973_28558475_28558591_28560048_28560192_28561421_28561630_28563430_28563523_28563817_28563908_28570851_28570964_28571462
transcript_58612.known	chr17	-	1722	10	FSM	ENSG00000109107.14	ENST00000395321.6	1722	10	0	0	0	0	multi-exon	TRUE	canonical	3	40	junction_9	106.522819673116	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCCTGTCTGTTTTACA	-28576937	False	NA	-24	True	AATAAA	-19	NA	28576948	28573114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28575964_28576021_28576800
transcript_58613.known	chr17	-	1608	9	FSM	ENSG00000109107.14	ENST00000226253.9	1608	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_8	41.3430768085782	1084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTACTTTGCCTGTCTGTT	-28573613	True	NA	-29	True	AATAAA	-14	NA	28576895	28573119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28573622_28573734_28573935_28574066_28574242_28574493_28574578_28574695_28574857_28574951_28575007_28575122_28575335_28575420_28575545_28576800
transcript_58616.known	chr17	-	3786	24	FSM	ENSG00000076382.17	ENST00000321765.10	3786	24	0	0	0	0	multi-exon	FALSE	canonical	3	543	junction_17	72.075417338362	176	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCCAAGCTTACGGAAT	-28590952	True	NA	-13	True	AATAAA	-15	NA	28599025	28577573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28577771_28578009_28578091_28578217_28578293_28578372_28578529_28578671_28578753_28579140_28579253_28579364_28579486_28579750_28579838_28580008_28580121_28583510_28583650_28583852_28583987_28584149_28584253_28584332_28584481_28584651_28584746_28585101_28585216_28585318_28585412_28585533_28585654_28585863_28585999_28586089_28586183_28586424_28586500_28591697_28591873_28591981_28593067_28598509_28598636_28598895
transcript_5862.known	chr1	-	3080	17	FSM	ENSG00000085840.13	ENST00000371566.1	3080	17	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_16	54.8506138867196	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTGTTTGTGAAGTTATTA	-52399433	True	NA	-4	True	ATTAAA	-17	NA	52404387	52372830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52373376_52374809_52374898_52375429_52375600_52381641_52381762_52383419_52383570_52383829_52383938_52384549_52384722_52385160_52385263_52385851_52385950_52388441_52388638_52389216_52389322_52393442_52393804_52396045_52396365_52397684_52397864_52401361_52401490_52402128_52402226_52404245
transcript_58620.known	chr17	-	1582	11	FSM	ENSG00000007202.15	ENST00000580882.5	1582	11	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_3	18.7192414376224	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAATGATAAGGAATGTC	-28638857	True	NA	NA	False	AATAAA	-17	NA	28645155	28639060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28639461_28639574_28639643_28639900_28640026_28640559_28640684_28641888_28642079_28642274_28642336_28642868_28642988_28643163_28643312_28643609_28643660_28644057_28644188_28644988
transcript_58629.known	chr17	-	583	4	FSM	ENSG00000132581.10	ENST00000587338.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	9.17726659862414	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCGACCTATCAGTGGGCA	-28661466	True	NA	NA	False	NA	NA	NA	28662189	28649126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28651485_28651578_28655286_28655484_28662045
transcript_58631.known	chr17	-	1025	3	FSM	ENSG00000132581.10	ENST00000592250.5	1025	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	153	572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-28661462	True	NA	-3	True	GATAAA	-20	NA	28662185	28648588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28655286_28655484_28662045
transcript_58633.known	chr17	-	681	3	FSM	ENSG00000132581.10	ENST00000588472.6	681	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	18	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATTAGTACTGATAAAACA	-28661409	False	NA	NA	False	NA	NA	NA	28662132	28648740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649138_28655286_28655484_28662045
transcript_58634.known	chr17	-	924	2	FSM	ENSG00000132581.10	ENST00000585428.1	924	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGCTCAGAAAAGGGATCT	-28657269	True	NA	NA	False	NA	NA	NA	28661916	28660487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28661221_28661725
transcript_58635.known	chr17	-	823	2	FSM	ENSG00000132581.10	ENST00000585749.5	823	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTGTGTTGTTATTTAT	-28661457	True	NA	-3	True	GATAAA	-20	NA	28662180	28648588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28662045
transcript_58638.known	chr17	-	1309	3	FSM	ENSG00000132581.10	ENST00000247020.9	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	2	986	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTATCTGTTACTGC	-28657259	True	NA	NA	False	AATAAA	-17	NA	28661906	28648345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28649277_28655286_28655484_28661725
transcript_58639.nnic	chr17	+	558	3	NNC	ENSG00000109111.15	novel	6404	37	NA	NA	8	-3422	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAATGAACAATTCTCTTC	28654489	True	NA	NA	False	AAAAAG	-4	NA	28662212	28670901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_28662343_28668532_28668631_28670571
transcript_58640.nnic	chr17	+	746	2	NNC	ENSG00000109111.15	novel	6404	37	NA	NA	-270	-3421	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATGAACAATTCTCTTCA	28661916	False	NA	NA	False	AAAAAG	-5	NA	28661927	28670902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_28662343_28670571
transcript_58641.known	chr17	+	5569	38	FSM	ENSG00000109111.15	ENST00000347486.8	5569	38	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	81.2671918093192	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTCTCTTTGGTGGTCAAC	28654474	True	NA	17	True	CATAAA	-17	NA	28662197	28701735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28662343_28672756_28672859_28673370_28673511_28674282_28674442_28674536_28674614_28674969_28675163_28675400_28675486_28676156_28676431_28677714_28677817_28678075_28678193_28678544_28678635_28678820_28678964_28681255_28681405_28681881_28681981_28682726_28682857_28682941_28683093_28683267_28683423_28683620_28683817_28684585_28684726_28684843_28684962_28686338_28686416_28686653_28686790_28687087_28687226_28687303_28687472_28688090_28688219_28689353_28689562_28690081_28690230_28690920_28691064_28693695_28693837_28695351_28695548_28696843_28697083_28697619_28697734_28697905_28698031_28699780_28699894_28700172_28700251_28700345_28700513_28700940_28701129_28701438
transcript_58645.known	chr17	-	1684	5	FSM	ENSG00000167525.15	ENST00000682792.1	1684	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	23.8432380351327	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28711872	False	NA	-3	True	AATAAA	-18	NA	28711888	28703196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28706679_28706764_28711569
transcript_58651.known	chr17	-	1566	4	FSM	ENSG00000167525.15	ENST00000301039.6	1566	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	20.0055547841649	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28711838	False	NA	-3	True	AATAAA	-18	NA	28711854	28703196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28704306_28704436_28704707_28704844_28711569
transcript_58661.nnic	chr17	-	1245	3	NIC	ENSG00000167525.15	novel	1566	4	NA	NA	116	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	32	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28710954	False	NA	-3	True	AATAAA	-18	NA	28710970	28703196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28704213_28704306_28704436_28710870
transcript_58662.nnic	chr17	-	1886	3	NIC	ENSG00000167525.15	novel	1684	5	NA	NA	-422	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	31.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGCCACTGTGCCTGG	-28712294	False	536	-3	True	AATAAA	-18	NA	28712310	28703196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28704213_28704306_28704436_28711569
transcript_58667.known	chr17	-	766	2	FSM	ENSG00000167525.15	ENST00000581289.1	766	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTCACAAGCCAGGAAGG	-28711731	False	NA	NA	False	AAAAAG	-12	NA	28711747	28703624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28704213_28711569
transcript_5867.nic	chr1	-	503	3	ISM	ENSG00000085840.13	ENST00000371568.8	3121	17	-58	28494	-58	-28492	5prime_fragment	FALSE	canonical	3	207	junction_2	44.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGATTGGGAGGTGGGGA	-52399527	True	NA	NA	False	AATAAA	-15	NA	52404481	52401322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_52401490_52402128_52402229_52404245
transcript_58672.known	chr17	-	863	11	FSM	ENSG00000109113.20	ENST00000436730.7	863	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	337.681210611429	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGACTGCCCAGCCCTAGG	-28717922	False	NA	NA	False	NA	NA	NA	28718161	28714624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_58676.known	chr17	-	1184	11	FSM	ENSG00000109113.20	ENST00000450529.5	1184	11	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_10	416.329965291954	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-28717927	False	3832	-3	True	ATTAAA	-18	NA	28718166	28714284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717292_28718121
transcript_58687.known	chr17	-	914	9	FSM	ENSG00000109113.20	ENST00000430132.6	914	9	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_8	393.496188037445	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGGCTGAGGAGACTGT	-28718166	False	3832	NA	False	NA	NA	NA	28718405	28714646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28718121
transcript_5869.known	chr1	-	2910	21	FSM	ENSG00000134744.14	ENST00000484723.6	2910	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_20	63.6306529905202	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGCTTTGGCTGGGACTG	-52553304	True	NA	NA	False	AAAAAG	-38	NA	52553458	52446399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52446443_52446589_52446668_52461133_52461224_52461512_52461617_52461711_52461770_52465069_52465174_52468180_52468268_52471951_52472103_52474831_52475536_52477707_52477883_52481422_52481636_52481803_52481924_52488908_52489036_52490731_52490802_52493610_52493663_52495426_52495516_52497005_52497184_52509595_52509713_52515890_52516055_52552930_52553091_52553432
transcript_58705.known	chr17	-	1741	10	FSM	ENSG00000109113.20	ENST00000395245.9	1741	10	0	0	0	0	multi-exon	FALSE	canonical	3	881	junction_8	131.832478809798	1125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717857	False	NA	-2	True	ATTAAA	-19	NA	28717868	28714283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_58706.known	chr17	-	1592	11	FSM	ENSG00000109113.20	ENST00000301043.10	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_10	334.06168592043	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28718176	False	3832	-2	True	ATTAAA	-19	NA	28718415	28714283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212_28717426_28718121
transcript_58707.known	chr17	-	1597	10	FSM	ENSG00000109113.20	ENST00000395243.7	1597	10	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_3	324.262734503449	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGGGCTGGAGTTCTTT	-28717737	False	3031	-2	True	ATTAAA	-19	NA	28717748	28714283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715218_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28715992_28716059_28716902_28716995_28717212
transcript_58708.known	chr17	-	1293	10	FSM	ENSG00000109113.20	ENST00000415040.6	1293	10	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_7	459.8052727937	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGGGGCTGGAGTTCTT	-28717944	False	3832	-3	True	ATTAAA	-18	NA	28718183	28714284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28714711_28714792_28714901_28715031_28715123_28715194_28715277_28715455_28715508_28715640_28715706_28715799_28715902_28716902_28716995_28717212_28717426_28718121
transcript_5871.known	chr1	-	539	3	FSM	ENSG00000134744.14	ENST00000524582.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	88	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAACCTTCCAGGTCCTAA	-52553333	True	NA	NA	False	AGTAAA	-5	NA	52553487	52526049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52526374_52552930_52553091_52553432
transcript_58737.known	chr17	+	580	6	FSM	ENSG00000198242.14	ENST00000394935.7	580	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7464.73355452155	5903	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACATGCCTGTCTGTCA	28720237	False	NA	33	True	AATATA	-23	NA	28720263	28723933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720329_28720413_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_5874.known	chr1	+	5233	10	FSM	ENSG00000134748.13	ENST00000257181.10	5233	10	0	0	0	0	multi-exon	TRUE	canonical	3	311	junction_3	38.6957106756209	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTGTTGGGAGTTAAAA	52399140	True	NA	NA	False	AATAAA	-26	NA	52404601	52420836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52404880_52405679_52405840_52408568_52408691_52411114_52411201_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_58741.known	chr17	+	636	5	FSM	ENSG00000198242.14	ENST00000496182.5	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_1	6575.6783442851	10977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720048	False	NA	36	True	AATATA	-26	NA	28720078	28723936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720214_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_58744.known	chr17	+	587	5	FSM	ENSG00000198242.14	ENST00000355731.8	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6742.12786792864	11506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGACAGGGCTTGGGCAAGA	28719832	False	NA	-63	True	NA	NA	NA	28720298	28723992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720329_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_58745.known	chr17	+	688	5	FSM	ENSG00000198242.14	ENST00000394938.8	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_1	6563.85756910523	11283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720217	False	NA	36	True	AATATA	-26	NA	28720243	28723936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720431_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_5875.known	chr1	+	1059	8	FSM	ENSG00000134748.13	ENST00000474048.1	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	132.545102065797	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTGTAGTTTAGTTTTT	52399166	True	NA	28	True	ATTAAA	-22	NA	52404627	52417022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52404880_52405679_52405714_52412513_52412625_52413878_52413992_52414620_52414648_52414761_52414860_52415337_52415387_52416647
transcript_58754.known	chr17	-	1042	4	FSM	ENSG00000160606.11	ENST00000292090.8	1042	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_2	17.2497987105808	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTCCTTTATTGGGC	-28722401	True	NA	-1	True	AATGAA	-15	NA	28726233	28724347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28725903
transcript_58755.known	chr17	-	784	4	FSM	ENSG00000160606.11	ENST00000394933.7	784	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	133.369994959719	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGGACTTAGCCCCAAG	-28726917	False	239	-106	True	NA	NA	NA	28726932	28724452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28726755
transcript_58757.known	chr17	-	578	4	FSM	ENSG00000160606.11	ENST00000580518.1	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	135.711294870971	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTACTTTTCCCGCCTC	-28727696	True	NA	NA	False	NA	NA	NA	28727935	28724598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724894_28725303_28725387_28725480_28725564_28727818
transcript_58767.known	chr17	+	590	2	FSM	ENSG00000160602.14	ENST00000581000.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAATTAGCCGGGTG	28728610	False	NA	NA	False	AATACA	-6	NA	28728813	28734525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28728861_28733982
transcript_58768.known	chr17	+	970	5	FSM	ENSG00000198242.14	ENST00000422514.7	970	5	0	0	0	0	multi-exon	FALSE	canonical	3	12081	junction_1	1995.56464440519	124016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCATTAGTGTTTTCAAT	28532132	True	NA	29	True	AATAAA	-23	NA	28719984	28724359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720031_28720706_28720891_28722722_28722900_28723570_28723641_28723866
transcript_58769.known	chr17	+	639	4	FSM	ENSG00000198242.14	ENST00000472628.1	639	4	0	0	0	0	multi-exon	FALSE	canonical	3	12918	junction_3	1686.96499337979	11210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGCCTGTCTGTCAATT	28720102	False	NA	36	True	AATATA	-26	NA	28720568	28723936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28720891_28722722_28722900_28723570_28723641_28723866
transcript_58770.known	chr17	+	412	2	FSM	ENSG00000198242.14	ENST00000580755.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	3	12918	junction_1	0	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGTCTGTCAATTT	28723289	False	NA	37	True	AATATA	-27	NA	28723299	28723937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28723641_28723866
transcript_58771.known	chr17	-	408	2	FSM	ENSG00000160606.11	ENST00000581236.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTGAAGTCCTTGTCC	-28724835	False	NA	-11	True	AATGAA	-5	NA	28724850	28724357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28724654_28724738
transcript_58772.known	chr17	+	3573	15	FSM	ENSG00000160602.14	ENST00000268766.11	3573	15	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	17.855428489135	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGAGTGTGGTGTCTT	28728584	True	NA	12	True	AATAAA	-14	NA	28728787	28743455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28728861_28733982_28734189_28734771_28735005_28735239_28735372_28737305_28737515_28737674_28737737_28737818_28738001_28738094_28738246_28738670_28738748_28739083_28739202_28740462_28740614_28740821_28740986_28741077_28741237_28741412_28741572_28741958
transcript_58773.known	chr17	+	2894	7	FSM	ENSG00000076604.16	ENST00000262395.10	2894	7	0	0	0	0	multi-exon	FALSE	canonical	3	309	junction_4	19.5994614438481	300	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGTGCCTTACTGTCTTG	28737480	True	NA	15	True	ATTAAA	-15	NA	28744010	28750956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28744256_28747212_28747265_28747842_28747948_28748016_28748179_28748261_28748424_28748510_28748667_28748944
transcript_58777.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583522.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	47.4888144724629	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838745	True	NA	-17	True	AGTAAA	-15	NA	28842839	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759765_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_58778.known	chr17	-	4147	5	FSM	ENSG00000173065.14	ENST00000583307.6	4147	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	146.348898185125	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838633	True	NA	-17	True	AGTAAA	-15	NA	28842727	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28834292_28834327_28842681
transcript_58779.known	chr17	-	4050	4	FSM	ENSG00000173065.14	ENST00000577682.6	4050	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	30.2103734943259	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759765_28766585_28766708_28834292_28834327_28842681
transcript_58780.known	chr17	-	4169	4	FSM	ENSG00000173065.14	ENST00000581229.6	4169	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	159.354949719173	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838689	True	NA	-17	True	AGTAAA	-15	NA	28842783	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28790377_28790426_28842681
transcript_58782.known	chr17	-	4162	4	FSM	ENSG00000173065.14	ENST00000577376.6	4162	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	153.573724604468	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28834292_28834327_28842681
transcript_58784.known	chr17	-	4010	3	FSM	ENSG00000173065.14	ENST00000582266.6	4010	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	32	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838690	True	NA	-17	True	AGTAAA	-15	NA	28842784	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759765_28766585_28766708_28842681
transcript_58786.known	chr17	-	4246	3	FSM	ENSG00000173065.14	ENST00000452648.8	4246	3	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_2	10.5	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28807351	True	NA	-17	True	AGTAAA	-15	NA	28812435	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28812208
transcript_58787.known	chr17	-	4128	3	FSM	ENSG00000173065.14	ENST00000581407.6	4128	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	164.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	-28838696	True	NA	-17	True	AGTAAA	-15	NA	28842790	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28842681
transcript_58788.known	chr17	-	4302	3	FSM	ENSG00000173065.14	ENST00000577513.6	4302	3	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_2	184	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCTGACCTTGTTCTAT	NA	False	NA	-17	True	AGTAAA	-15	NA	28855232	28755979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28759877_28766585_28766708_28854949
transcript_5879.known	chr1	+	1229	3	FSM	ENSG00000116157.6	ENST00000361314.5	1229	3	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	21.5	386	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCCATAGTCTCCCTCCC	52601217	True	NA	12	True	AATAAA	-20	NA	52602370	52609051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52602548_52606683_52606946_52608261
transcript_58790.known	chr17	+	1841	10	FSM	ENSG00000132591.12	ENST00000254928.10	1841	10	0	0	0	0	multi-exon	TRUE	canonical	3	576	junction_9	44.8151209049847	3066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTATTCCTTTTATTTAT	28843644	True	NA	21	True	AATAAA	-22	NA	28855015	28861061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858825_28858963_28859114_28859202_28859284_28860430
transcript_58791.known	chr17	+	1628	10	FSM	ENSG00000132591.12	ENST00000461894.5	1628	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	206.166599299369	1043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTATTCCTTTTATTT	28843664	True	NA	19	True	AATAAA	-20	NA	28855035	28861059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_28855318_28856263_28856392_28856504_28856583_28857938_28857986_28858145_28858208_28858373_28858487_28858575_28858634_28858963_28859114_28859202_28859284_28860430
transcript_58794.known	chr17	-	2668	11	FSM	ENSG00000132589.16	ENST00000394908.9	2668	11	0	0	0	0	multi-exon	FALSE	canonical	3	996	junction_5	95.063347300629	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886394	True	NA	-7	True	AATAAA	-17	NA	28897733	28879338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28888944_28889027_28897525
transcript_58795.nic	chr17	-	2553	11	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_7	306.37018458068	650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886348	True	NA	-7	True	AATAAA	-17	NA	28897687	28879338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883176_28883232_28884224_28884316_28888944_28889027_28897525
transcript_58796.nnic	chr17	-	2540	10	NIC	ENSG00000132589.16	novel	2668	11	NA	NA	-33	0	combination_of_known_splicesites	FALSE	canonical	3	76	junction_9	326.547635154033	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGCATTGTGTCTTCTG	-28886348	True	NA	-7	True	AATAAA	-17	NA	28897687	28879338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28880600_28880712_28880863_28881191_28881376_28881813_28882029_28882117_28882238_28882336_28882451_28882572_28882692_28883107_28883232_28884224_28884316_28897525
transcript_58800.nnic	chr17	-	1699	4	NIC	ENSG00000167536.14	novel	1929	5	NA	NA	-6	0	intron_retention	FALSE	canonical	3	15	junction_3	103.654340103163	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-28900671	True	NA	-12	True	AATAAA	-15	NA	28902971	28897783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_28898893_28900989_28901302_28901492_28901617_28902817
transcript_58801.known	chr17	-	1569	3	FSM	ENSG00000167536.14	ENST00000426464.2	1569	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	117.5	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGCTGCGCTCACTCCTGC	-28900665	True	NA	-12	True	AATAAA	-15	NA	28902965	28897783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_28898893_28900989_28901302_28902817
transcript_58805.known	chr17	+	2169	8	FSM	ENSG00000179761.12	ENST00000323372.9	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_7	8.97388501402252	180	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGTCTGTAGCGGGCTTT	29043103	True	NA	19	True	AATAAA	-33	NA	29043140	29057216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_29043340_29044858_29045008_29052919_29053134_29053412_29053596_29054544_29054692_29055062_29055222_29055812_29055889_29056174
transcript_58810.known	chr17	-	9980	42	FSM	ENSG00000196535.18	ENST00000527372.7	9980	42	0	0	0	0	multi-exon	TRUE	canonical	2	21	junction_31	29.6820349786855	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTCTTTTGTCTTTGT	-29177199	True	NA	NA	False	AATAAA	-23	NA	29180398	29071121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29074915_29082315_29082439_29085603_29085649_29086437_29086578_29086935_29087122_29089960_29090099_29090531_29090616_29090809_29090927_29092342_29092457_29092854_29093002_29093322_29093428_29093979_29094091_29094649_29094851_29094935_29095060_29096760_29096916_29097222_29097351_29097787_29097900_29098104_29098225_29098355_29098446_29098825_29098970_29099633_29099763_29103598_29103665_29107079_29107190_29109857_29110102_29110435_29110623_29111423_29111584_29111721_29111864_29114010_29114098_29114906_29115100_29115350_29115442_29115663_29115841_29116443_29116456_29118044_29118190_29118376_29118441_29119334_29119436_29120615_29120759_29120997_29121212_29121546_29121724_29121850_29121958_29122165_29122254_29165941_29167022_29180312
transcript_58813.known	chr17	-	10877	4	FSM	ENSG00000108256.9	ENST00000225388.9	10877	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_3	28.003967972811	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGTGTTTGTTATCTTTT	-29273061	True	NA	-2	True	AATAAA	-16	NA	29294148	29255838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29264592_29267497_29267531_29285991_29287717_29293782
transcript_58817.known	chr17	-	559	3	FSM	ENSG00000108256.9	ENST00000579665.1	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	96.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATATACATATATATATAT	-29273028	True	NA	NA	False	AATATA	-12	NA	29294115	29264398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29264592_29267497_29267531_29293782
transcript_5882.nnic	chr1	+	641	4	NNC	ENSG00000182183.15	novel	924	3	NA	NA	-260	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.09120616516523	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	52632893	False	NA	2	True	AATAAA	-14	NA	52632907	52657065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_52633040_52639974_52640068_52642862_52643003_52656789
transcript_58821.known	chr17	-	341	1	FSM	ENSG00000239256.1	ENST00000492004.1	341	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	57	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	NA	False	NA	NA	False	NA	NA	NA	29340822	29340481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29340500_29340800
transcript_58823.known	chr17	+	1473	7	FSM	ENSG00000167543.16	ENST00000301057.8	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_1	33.4153158496719	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTTGAGCTTGTGC	29566378	True	NA	24	True	ATTAAA	-15	NA	29568700	29573157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_29568831_29569017_29569087_29569317_29569360_29571590_29571720_29571856_29572058_29572141_29572698_29572811
transcript_58824.nic	chr17	+	926	4	NIC	ENSG00000167543.16	novel	1473	7	NA	NA	0	1127	combination_of_known_splicesites	TRUE	canonical	0	0	junction_3	177.471750490669	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTAATAGCTCCAGG	29566378	True	NA	NA	False	NA	NA	NA	29568700	29570519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_29568831_29569017_29569087_29569317_29569963_29570437
transcript_58828.known	chr17	-	965	8	FSM	ENSG00000141298.19	ENST00000579040.5	965	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.22161910928488	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGGTACATCTATATCAT	-29928905	True	NA	NA	False	AATAAA	-32	NA	29930173	29673900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29674160_29676819_29676886_29677672_29677742_29684562_29684685_29695458_29695524_29702958_29703063_29793893_29793938_29929937
transcript_5883.nnic	chr1	+	635	3	NNC	ENSG00000182183.15	novel	924	3	NA	NA	-347	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	2	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCTTCTGGAGTCTCTTC	52632806	True	NA	2	True	AATAAA	-14	NA	52632820	52657065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_52633040_52642862_52643003_52656789
transcript_58830.known	chr17	-	560	3	FSM	ENSG00000141298.19	ENST00000582084.1	560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTAGTTTTCTGTAGTGC	NA	False	NA	-15	True	AATAAA	-23	NA	29930276	29925216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29925556_29929937_29930041_29930158
transcript_58831.nnic	chr17	-	719	3	NNC	ENSG00000141298.19	novel	570	2	NA	NA	0	-4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATATTTTAGTTTTCTGTA	-29928960	True	NA	-19	True	AATAAA	-19	NA	29930228	29925220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_29925556_29928491_29928585_29929937
transcript_58832.nic	chr17	-	2306	2	ISM	ENSG00000141298.19	ENST00000577483.1	1630	7	-125	116097	-4	1689	5prime_fragment	FALSE	canonical	2	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAGAGGAAGAAGA	-29928964	True	NA	NA	False	ACTAAA	-9	NA	29930232	29791926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_29793938_29929937
transcript_58833.known	chr17	-	570	2	FSM	ENSG00000141298.19	ENST00000590153.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTGATACCTATATT	-29928960	True	NA	-75	True	NA	NA	NA	29930228	29925276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_29925556_29929937
transcript_58835.nnic	chr17	+	469	3	NNC	ENSG00000176927.16	novel	566	4	NA	NA	-63	-37916	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTTCTTCTCCTTCGTCTC	29929090	True	NA	NA	False	ATTAAA	-18	NA	29929136	29930963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_29929330_29929816_29929969_29930839
transcript_5884.known	chr1	-	908	3	FSM	ENSG00000162377.6	ENST00000486918.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	149	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTATAGCCTACAATGTTT	-52693587	False	NA	-96	True	NA	NA	NA	52698068	52687561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52688169_52692726_52692868_52697908
transcript_58844.known	chr17	+	1242	8	FSM	ENSG00000126653.18	ENST00000475652.5	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	162.220686166741	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCAGAACCGACCCAGTG	30109858	True	NA	5	True	AAGAAA	-17	NA	30116828	30185193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_58850.known	chr17	+	2506	7	FSM	ENSG00000126653.18	ENST00000247026.10	2506	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.9809832971462	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTATGCATTTATTTTAAAA	30109845	True	NA	15	True	AATAAA	-22	NA	30116815	30186475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_58859.known	chr17	+	2420	6	FSM	ENSG00000126653.18	ENST00000612959.4	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_1	153.09813846027	321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATGCATTTATTTTAAA	30109836	True	NA	14	True	AATAAA	-21	NA	30116806	30186474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_58870.nic	chr17	+	412	5	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	7331	6	0	5prime_fragment	FALSE	canonical	3	211	junction_1	97.8068888166882	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGAATGGAAAAGAAA	30109816	True	NA	NA	False	AAAAAG	-8	NA	30116786	30179144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070_30178200_30179089
transcript_58877.known	chr17	+	2057	7	FSM	ENSG00000126653.18	ENST00000540900.7	2057	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.782573649317	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGCTGAATTTATATATA	NA	False	NA	-52	True	NA	NA	NA	30115520	30185847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30115624_30116645_30116864_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_58879.nic	chr17	+	322	4	ISM	ENSG00000126653.18	ENST00000247026.10	2506	7	-29	8311	6	0	5prime_fragment	FALSE	canonical	3	211	junction_1	97.2042523075337	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAAATTGCTTTTG	30109816	True	NA	28	True	AAAAAG	-8	NA	30116786	30178164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_30116864_30118079_30118174_30172541_30172599_30178070
transcript_58880.known	chr17	+	540	4	FSM	ENSG00000126653.18	ENST00000479218.6	540	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	23.8094285712381	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTAAGCATTTATAGAAATT	30109856	True	NA	NA	False	TATAAA	-35	NA	30116826	30128236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30117301_30117333_30118079_30118174_30127858
transcript_58883.known	chr17	+	482	3	FSM	ENSG00000126653.18	ENST00000584423.5	482	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	101.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATGTAGTTATATATATAT	30109810	True	NA	NA	False	NA	NA	NA	30116780	30128163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30118079_30118174_30127858
transcript_58885.known	chr17	+	1800	7	FSM	ENSG00000126653.18	ENST00000394826.8	1800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.147620145871	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGGAGTGTGTTACCAG	30109849	True	NA	-12	True	NA	NA	NA	30116819	30185744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30116864_30156539_30156663_30172541_30172599_30178070_30178200_30179089_30179298_30180907_30181017_30184614
transcript_58886.known	chr17	+	368	4	FSM	ENSG00000126653.18	ENST00000589608.1	368	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	202.089639076877	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAATCCCAAATTGCTTTTG	30111109	False	NA	28	True	AAAAAG	-8	NA	30118079	30178164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30118174_30156539_30156663_30172541_30172599_30178070
transcript_58887.known	chr17	+	497	4	FSM	ENSG00000126653.18	ENST00000588614.1	497	4	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	57.5634915163731	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAAGAGAAAAGAGGGCT	30111067	False	NA	NA	False	AAGAAA	-26	NA	30118037	30179264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30118174_30172541_30172599_30178070_30178200_30179089
transcript_58890.known	chr17	-	2307	12	FSM	ENSG00000108578.15	ENST00000261714.11	2307	12	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_8	37.7008669913681	1539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	-30287299	True	NA	-16	True	AATAAA	-19	NA	30291944	30248202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286903_30287805_30287948_30289372_30289483_30291310_30291509_30291806
transcript_58896.nic	chr17	-	1952	10	NIC	ENSG00000108578.15	novel	2307	12	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_8	127.321116342367	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGCTGATTTATGTGATCT	-30291955	False	NA	-16	True	AATAAA	-19	NA	30292073	30248202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_30249169_30266884_30266955_30271270_30271389_30272560_30272629_30272740_30272900_30274041_30274198_30285387_30285481_30286813_30286852_30291491_30291509_30291806
transcript_58897.nnic	chr17	+	680	3	Antisense	novelGene_ENSG00000108578.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCTTTGATTGTCAGTG	NA	False	NA	NA	False	AATAAA	-18	NA	30291351	30297515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_30291446_30295475_30295541_30296994
transcript_5890.known	chr1	-	3988	3	FSM	ENSG00000162377.6	ENST00000371538.5	3988	3	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_1	13.5	844	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTGCCTCATATCCCA	-52693866	True	NA	-14	True	ATTAAA	-8	NA	52698347	52684448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52688169_52692726_52692868_52698220
transcript_58901.known	chr17	+	1011	9	FSM	ENSG00000108587.16	ENST00000467337.6	1011	9	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_1	144.100659262892	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTCAGTTGCTTTTGTC	30468675	True	NA	NA	False	ATTAAA	-14	NA	30477422	30522609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477487_30481142_30481258_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_58902.known	chr17	+	947	9	FSM	ENSG00000108587.16	ENST00000414833.2	947	9	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	151.658281590555	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTTTTCTAACACATT	30468694	True	NA	NA	False	NA	NA	NA	30477441	30522558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30477487_30481142_30481264_30484213_30484302_30484662_30484771_30490125_30490218_30492678_30492754_30510879_30510910_30519938_30520022_30522253
transcript_58908.known	chr17	+	1273	7	FSM	ENSG00000214719.13	ENST00000651170.1	1273	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	24.415955621046	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAAGAAGTTAAGTTG	30600156	False	NA	NA	False	AATAAA	-22	NA	30600891	30634326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30601013_30607551_30607666_30608429_30608563_30610888_30610943_30631754_30631980_30633097_30633391_30633993
transcript_58914.known	chr17	-	1352	3	FSM	ENSG00000231421.8	ENST00000436477.7	1352	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTCGTGTGATCTGGTCT	NA	False	NA	NA	False	ATTAAA	-19	NA	30577000	30573470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30573778_30573935_30573986_30576005
transcript_58924.known	chr17	+	563	7	FSM	ENSG00000264538.7	ENST00000579526.5	563	7	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	117.464060697541	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGCCTTTGAATCCTGAC	30709596	False	NA	NA	False	AAAAAG	-2	NA	30709607	30768876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30709812_30734896_30734944_30735032_30735098_30743300_30743370_30759490_30759540_30766502_30766589_30768833
transcript_58927.nnic	chr17	+	818	7	NIC	ENSG00000264538.7	novel	985	9	NA	NA	77	0	intron_retention	FALSE	canonical	3	30	junction_3	142.123674624916	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30731948	True	NA	17	True	AATATA	-18	NA	30731962	30770050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_30732124_30734896_30734944_30735032_30735098_30759490_30759540_30766502_30766589_30768833_30769065_30769871
transcript_5893.nnic	chr1	+	1007	2	Genic_Genomic	ENSG00000230953.2	novel	175	1	NA	NA	-148297	160	multi-exon	FALSE	canonical	0	0	junction_1	0	52183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAATACAACGAAATGT	NA	False	NA	NA	False	AATAAA	-21	NA	52772124	52920756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_52772678_52920302
transcript_58930.known	chr17	-	1392	7	FSM	ENSG00000176390.12	ENST00000578692.1	1392	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	61.5304802516606	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGTATAGAAGATATAGG	-30818609	True	NA	NA	False	AATAAA	-16	NA	30824671	30783935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30824522
transcript_58932.nnic	chr17	+	722	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	-106	0	combination_of_known_splicesites	FALSE	canonical	3	107	junction_4	122.58319623831	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30709491	False	NA	17	True	AATATA	-18	NA	30709501	30770050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30768868_30769000_30769065_30769871
transcript_58934.nic	chr17	+	915	6	NIC	ENSG00000264538.7	novel	929	6	NA	NA	-97	0	intron_retention	FALSE	canonical	3	108	junction_1	101.162048219676	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30709500	False	NA	17	True	AATATA	-18	NA	30709510	30770050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_30709812_30743300_30743370_30759490_30759540_30766502_30766589_30768833_30769065_30769871
transcript_58938.nnic	chr17	+	855	5	NIC	ENSG00000264538.7	novel	929	6	NA	NA	-106	0	intron_retention	FALSE	canonical	3	110	junction_1	109.007740550843	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATTGCCTTTGTTTCTT	30709491	False	NA	17	True	AATATA	-18	NA	30709501	30770050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_30709812_30759490_30759540_30766502_30766589_30768833_30769065_30769871
transcript_58944.known	chr17	-	2873	8	FSM	ENSG00000176390.12	ENST00000324238.7	2873	8	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_2	28.7487355533833	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTACTTTTTTCTTC	-30818630	True	NA	-7	True	AATAAA	-17	NA	30824692	30782683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30784444_30785918_30786032_30792439_30792573_30793449_30793673_30796159_30796338_30797310_30797399_30803900_30804109_30824522
transcript_58946.known	chr17	+	418	1	FSM	ENSG00000242439.1	ENST00000490847.1	418	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTAATGCTGTAA	30830887	False	NA	NA	False	NA	NA	NA	30830900	30831318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30830900_30831300
transcript_58947.known	chr17	+	6873	23	FSM	ENSG00000176208.9	ENST00000321990.5	6873	23	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	18.8134051908748	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTCAGATGTAATCATCT	30828886	True	NA	NA	False	ATTAAA	-37	NA	30831965	30895869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_30832414_30834147_30836049_30837205_30837315_30840616_30840782_30843912_30844040_30844834_30844917_30855142_30855328_30856954_30857113_30858160_30858324_30860432_30860613_30865703_30865801_30868332_30868413_30869247_30869391_30869495_30869647_30876373_30876551_30877415_30877550_30878002_30878097_30879422_30879488_30887191_30887373_30892606_30892789_30893293_30894151_30894563_30894723_30894834
transcript_5895.nnic	chr1	-	1010	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148108	55	multi-exon	FALSE	canonical	0	0	junction_1	0	48905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAACCATAT	-52919776	False	NA	NA	False	AATAAA	-30	NA	52920756	52772138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772740_52920347
transcript_58954.known	chr17	-	1262	4	FSM	ENSG00000172171.11	ENST00000306049.9	1262	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	56.8760836282606	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30899607_30900412_30900522_30904065_30904530_30906167
transcript_58959.known	chr17	-	1306	4	FSM	ENSG00000172171.11	ENST00000581216.6	1306	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	4.54606056566195	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905506	True	NA	-3	True	AATAAA	-13	NA	30906238	30898985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30899607_30900412_30900563_30904065_30904530_30906167
transcript_5896.nnic	chr1	-	984	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	55	multi-exon	FALSE	canonical	0	0	junction_1	0	48891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAAAACAAAAAAACCATAT	-52919782	False	NA	NA	False	AATAAA	-30	NA	52920762	52772138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772740_52920379
transcript_58968.nnic	chr17	-	1431	3	NIC	ENSG00000172171.11	novel	1306	4	NA	NA	-589	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	61.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30906773	True	NA	-3	True	AATAAA	-13	NA	30906827	30898985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_30899607_30900412_30900563_30906167
transcript_5897.nnic	chr1	-	991	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	49	multi-exon	FALSE	canonical	0	0	junction_1	0	47001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAACAAAAACAAAAAAA	-52919782	False	NA	NA	False	AATAAA	-24	NA	52920762	52772144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772753_52920379
transcript_58971.known	chr17	-	2109	3	FSM	ENSG00000172171.11	ENST00000580840.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	5.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTGCCTCTCAGGTTAA	-30905503	True	NA	-3	True	AATAAA	-13	NA	30906235	30898985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30900563_30904065_30904530_30906167
transcript_58977.known	chr17	-	559	2	FSM	ENSG00000172171.11	ENST00000541382.2	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATATTTGAGAACCTACT	-30905503	True	NA	NA	False	NA	NA	NA	30906235	30904038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_30904530_30906167
transcript_58979.known	chr17	+	620	2	FSM	ENSG00000196712.19	ENST00000498569.5	620	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGTTGTCGAAAACTTCCT	31378637	False	NA	8	True	AATAAA	-21	NA	31378647	31382116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_31379024_31381872
transcript_5898.nnic	chr1	-	1000	2	Genic_Genomic	ENSG00000228929.1	novel	455	1	NA	NA	-148114	49	multi-exon	FALSE	canonical	0	0	junction_1	0	46996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAACAAAAACAAAAAAA	-52919782	False	NA	NA	False	AATAAA	-24	NA	52920762	52772144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_52772762_52920379
transcript_5899.known	chr1	-	455	1	FSM	ENSG00000228929.1	ENST00000437890.1	455	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5877	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTCTGTGTACTCAAGC	-52772632	False	NA	NA	False	NA	NA	NA	52772648	52772193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52772200_52772600
transcript_59.known	ERCC-00120	+	520	1	FSM	ERCC-00120A	DQ854992	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00120_+_0_500
transcript_59007.nnic	chr17	-	723	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-92	45	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	7.1336448530109	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095519	False	NA	-8	True	AATAAA	-32	NA	31095542	31090741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31095226
transcript_59009.nnic	chr17	-	532	4	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-406	45	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	13.1233464566864	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	NA	False	NA	-8	True	AATAAA	-32	NA	31095856	31090741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31093372_31093492_31095731
transcript_59016.known	chr17	-	492	3	FSM	ENSG00000264107.1	ENST00000583377.1	492	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TCTTAAAAAATAAATAAATG	-31095168	True	NA	-53	True	NA	NA	NA	31095450	31090786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31090936_31093372_31093492_31095226
transcript_59021.nnic	chr17	-	567	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-55	45	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	11	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095223	True	NA	-8	True	AATAAA	-32	NA	31095505	31090741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31095226
transcript_59022.nnic	chr17	-	555	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-91	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095518	False	NA	-8	True	AATAAA	-32	NA	31095541	31090741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31095274
transcript_59023.nnic	chr17	-	364	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-357	45	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095784	False	NA	-8	True	AATAAA	-32	NA	31095807	31090741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31090936_31091024_31091119_31095731
transcript_59025.nnic	chr17	-	812	3	NNC	ENSG00000264107.1	novel	492	3	NA	NA	-92	45	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	8.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTACAGTAGTATTCCC	-31095519	False	NA	-8	True	AATAAA	-32	NA	31095542	31090741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_31091119_31093372_31093492_31095226
transcript_59030.known	chr17	-	868	4	FSM	ENSG00000172301.11	ENST00000302362.11	868	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	258.25955935841	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTATGCTTCGTCTGCTT	-31855238	True	NA	-6	True	AATAAA	-16	NA	31859244	31851870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31852309_31852811_31853031_31856798_31856866_31859100
transcript_59031.known	chr17	-	4330	19	FSM	ENSG00000108651.10	ENST00000261708.9	4330	19	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_7	26.4425769648726	591	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTACTTTAGAACA	-31893878	True	NA	-30	True	ATTAAA	-13	NA	31901708	31860903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_31863517_31865365_31865439_31868045_31868113_31873377_31873488_31873672_31873754_31875233_31875414_31878249_31878328_31878701_31878782_31880572_31880755_31884423_31884506_31885979_31886062_31887235_31887314_31889284_31889404_31892259_31892324_31892746_31892795_31894644_31894738_31894969_31895012_31899645_31899731_31901535
transcript_59034.known	chr17	+	3977	15	FSM	ENSG00000178691.11	ENST00000580398.1	3977	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	70.2815039389338	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTATTTTAGGGGAGATGT	31931837	True	NA	39	True	NA	NA	NA	31937066	32000649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_59035.known	chr17	+	4495	16	FSM	ENSG00000178691.11	ENST00000322652.10	4495	16	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_6	31.5845250434801	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTCTGTTTTGGGGTTTTT	31931777	True	NA	13	True	TATAAA	-6	NA	31937006	32001038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_31937521_31940285_31940333_31940421_31940487_31947616_31947686_31966146_31966197_31973145_31973232_31975481_31975714_31976520_31976615_31982998_31983105_31988319_31988498_31993241_31993334_31993864_31994009_31994563_31994722_31995563_31995763_31996797_31996878_31998657
transcript_59039.known	chr17	+	393	2	FSM	ENSG00000185158.12	ENST00000581370.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCTCTCCGAAGCTTTGT	32007979	False	NA	2	True	AATAAA	-14	NA	32008035	32017220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32008133_32016924
transcript_59044.known	chr17	+	431	3	FSM	ENSG00000264164.1	ENST00000358484.4	431	3	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_2	13.5	149	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGACACATGGACATAACTG	32082824	False	NA	NA	False	AAGAAA	-17	NA	32083178	32096989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32083323_32095061_32095202_32096842
transcript_59051.known	chr17	+	860	1	FSM	ENSG00000277511.1	ENST00000613639.1	860	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTCATTTATTTAT	32127538	True	NA	NA	False	ATTAAA	-16	NA	32127594	32128454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32127600_32128500
transcript_59052.known	chr17	+	3297	21	FSM	ENSG00000126858.19	ENST00000358365.7	3297	21	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_19	65.541494490132	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139635	True	NA	10	True	AATAAA	-20	NA	32142465	32225727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32211115_32211239_32224615
transcript_59054.known	chr17	+	2960	20	FSM	ENSG00000126858.19	ENST00000394692.6	2960	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_19	53.0256823783509	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32142668	False	NA	10	True	AATAAA	-20	NA	32142679	32225727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32209349_32209446_32224615
transcript_59056.known	chr17	+	3165	20	FSM	ENSG00000126858.19	ENST00000545287.7	3165	20	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_18	55.4373195500285	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGAGTTCTTTTGTCATC	32139671	True	NA	10	True	AATAAA	-20	NA	32142501	32225727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171042_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32211115_32211239_32224615
transcript_59058.known	chr17	+	2919	19	FSM	ENSG00000126858.19	ENST00000354266.7	2919	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	54.0625209626735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATTTTTTCCATCATCAG	32139729	True	NA	23	True	AATAAA	-29	NA	32142559	32225666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32142730_32171046_32171102_32173830_32173913_32175318_32175363_32175961_32176016_32176160_32176214_32182756_32182866_32183170_32183273_32192200_32192300_32193135_32193245_32193986_32194108_32198946_32199032_32199404_32199551_32200955_32201057_32202769_32202901_32203889_32203974_32206909_32207030_32208106_32208310_32224615
transcript_59064.known	chr17	+	13740	12	FSM	ENSG00000010244.19	ENST00000394670.9	13740	12	0	0	0	0	multi-exon	FALSE	canonical	3	442	junction_8	256.136262805498	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATACTTGTCTGAGCCCAT	32329830	True	NA	6	True	AATAAA	-20	NA	32350156	32381885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_59067.known	chr17	+	2124	11	FSM	ENSG00000010244.19	ENST00000394673.6	2124	11	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_8	182.635949363755	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCCTTTTTATTCATAAC	32329811	True	NA	18	True	AATAAA	-15	NA	32350137	32370343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32361467_32361516_32362913_32362985_32365329_32365488_32367771_32368015_32369294_32369455_32369598
transcript_59078.nic	chr17	-	1369	10	NIC	ENSG00000108666.10	novel	4547	10	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	198.972235795057	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACTGAGTCCTAGATA	-32341925	False	NA	-20	True	AATAAA	-14	NA	32341951	32331595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_32331979_32333416_32333521_32334468_32334606_32334774_32334840_32335322_32335443_32337896_32337955_32338207_32338352_32339812_32339939_32341203_32341285_32341800
transcript_5909.known	chr1	-	1556	10	FSM	ENSG00000121310.17	ENST00000371522.9	1556	10	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_6	28.1810723626013	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACAGTGTTTTCGTGAGG	-52920760	True	NA	2	True	AATAAA	-38	NA	52921740	52895909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52906518_52906612_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_59096.known	chr17	+	1005	5	FSM	ENSG00000010244.19	ENST00000577324.1	1005	5	0	0	0	0	multi-exon	FALSE	canonical	3	1061	junction_3	54.283975536064	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAAAATGAATATGAGGTGC	32329871	True	NA	NA	False	NA	NA	NA	32350197	32361333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891
transcript_59099.known	chr17	+	2283	11	FSM	ENSG00000010244.19	ENST00000321233.10	2283	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	387.420043363789	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGATATATCATTGGATTC	32329805	True	NA	12	True	AATAAA	-22	NA	32350131	32370451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32350327_32351785_32351913_32358502_32358642_32360597_32360766_32360891_32360968_32362913_32362985_32365329_32365488_32366664_32366758_32367771_32368015_32369294_32369455_32369598
transcript_591.known	SIRV6	+	574	4	FSM	SIRV6A	SIRV607	574	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12415.5112751035	13439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGCAGTCAAGTCGTAG	NA	False	NA	NA	False	NA	NA	NA	1130	2540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1736_1845_2027_2470
transcript_59105.known	chr17	+	3850	14	FSM	ENSG00000108671.11	ENST00000261712.8	3850	14	0	0	0	0	multi-exon	FALSE	canonical	3	2004	junction_13	131.193068802339	2134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTCCCTTTTACTTGT	32411336	True	NA	NA	False	AATAAA	-19	NA	32444509	32483319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32444615_32446944_32447047_32454494_32454620_32464048_32464121_32464520_32464579_32468998_32469194_32473800_32473946_32474763_32474825_32477520_32477584_32479250_32479377_32479850_32479887_32480145_32480198_32480488_32480632_32480752
transcript_59106.known	chr17	-	3500	22	FSM	ENSG00000176658.17	ENST00000579584.5	3500	22	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	25.7391414262509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAAGAAAATATGTCTG	-32874928	True	NA	NA	False	AATAAA	-20	NA	32877144	32594202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_32594567_32605086_32605242_32638721_32638836_32653842_32653948_32654476_32654622_32659114_32659339_32711987_32712196_32721022_32721190_32738252_32738386_32745210_32745286_32748935_32749007_32755491_32755663_32760289_32760405_32760481_32760628_32764877_32765082_32767635_32767753_32771124_32771221_32772788_32772843_32775863_32776030_32778479_32778574_32780575_32780785_32876777
transcript_59107.known	chr17	-	563	4	FSM	ENSG00000176658.17	ENST00000582217.1	563	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	54.7783412186483	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCCTGTCACGTCCGTAA	NA	False	NA	NA	False	AATACA	-12	NA	32684284	32653863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_32653948_32654476_32654622_32659114_32659339_32684174
transcript_59108.known	chr17	-	927	2	FSM	ENSG00000265222.1	ENST00000578408.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAACCTTCTCCTCCCAA	NA	False	NA	NA	False	AATAAA	-19	NA	32523424	32509953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_32510853_32523396
transcript_59109.nnic	chr17	+	1010	4	Fusion	ENSG00000236377.1_ENSG00000226377.2	novel	3024	3	NA	NA	-27	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTATGTGTGCATGTGT	32876717	False	NA	NA	False	AATAAA	-22	NA	32876731	32906584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_+_32876894_32877843_32877962_32878299_32878636_32906190
transcript_59110.known	chr17	+	3024	3	FSM	ENSG00000226377.2	ENST00000435733.2	3024	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTAAGAGATGAAGTGCTTA	32876734	True	NA	NA	False	NA	NA	NA	32876758	32881070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32876894_32877843_32877962_32878299
transcript_59114.known	chr17	+	896	9	FSM	ENSG00000006042.12	ENST00000439138.5	896	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.264178704407	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTCTGCAATTTAGTGCCT	32922723	True	NA	NA	False	GATAAA	-34	NA	32928209	32940978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32930899_32930972_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_59116.known	chr17	+	4218	8	FSM	ENSG00000006042.12	ENST00000579849.6	4218	8	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_1	81.8617550433382	1140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTCTGTGGAAGAGGGTT	32922666	True	NA	NA	False	AATAAA	-13	NA	32928152	32944315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_59118.known	chr17	+	806	7	FSM	ENSG00000006042.12	ENST00000578289.5	806	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	197.328547239257	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATTAATTTCACGGCCCA	32922717	True	NA	NA	False	NA	NA	NA	32928203	32945106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32931326_32931403_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32944877
transcript_5912.nic	chr1	-	1565	10	NIC	ENSG00000121310.17	novel	1606	10	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_8	31.6910237710037	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	-52920752	True	NA	-18	True	ATTAAA	-6	NA	52921732	52896231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52912022_52913894_52914096_52921552
transcript_59121.nic	chr17	+	1632	7	NIC	ENSG00000006042.12	novel	4218	8	NA	NA	38	0	intron_retention	FALSE	canonical	3	384	junction_1	86.3913897458666	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32928030	False	NA	-14	True	NA	NA	NA	32928108	32941613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_32928238_32931326_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_59122.known	chr17	+	1683	7	FSM	ENSG00000006042.12	ENST00000394642.7	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	190.707818985542	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32927717	False	NA	-14	True	NA	NA	NA	32927909	32941613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_32928238_32931474_32931660_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_59126.nnic	chr17	+	1283	6	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	232.996652336466	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32928046	False	NA	-14	True	NA	NA	NA	32928124	32941613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_32928238_32933173_32933306_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_59129.nnic	chr17	+	1123	5	NIC	ENSG00000006042.12	novel	1683	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	12	junction_1	260.105147007898	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTGGATAGTAAATTTATA	32922666	True	NA	-14	True	NA	NA	NA	32928152	32941613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_32928238_32934290_32934325_32936331_32936448_32939476_32939537_32940785
transcript_59133.known	chr17	+	372	1	FSM	ENSG00000265689.1	ENST00000577584.1	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGCTTGTTTACTTT	NA	False	NA	NA	False	AATAAA	-16	NA	33688802	33689174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_33688800_33689200
transcript_59138.known	chr17	+	3810	4	FSM	ENSG00000263571.3	ENST00000583224.3	3810	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	13.4742552876052	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTCACTATTAATACCAC	34155538	False	NA	NA	False	AATAAA	-11	NA	34155565	34165736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34156703_34159042_34159116_34161424_34161900_34163611
transcript_59140.nnic	chr17	+	1376	4	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	1866	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	15.9652400197707	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34157451	False	NA	NA	False	NA	NA	NA	34157479	34162199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34157871_34157983_34158121_34159042_34159116_34161424
transcript_59142.known	chr17	+	1937	3	FSM	ENSG00000263571.3	ENST00000667899.1	1937	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	4.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34155586	False	NA	NA	False	NA	NA	NA	34155613	34162199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34156703_34159042_34159116_34161424
transcript_59144.nnic	chr17	+	1133	3	NNC	ENSG00000263571.3	novel	3810	4	NA	NA	2222	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	11	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGAGAGATGCTCAGAAA	34157807	False	NA	NA	False	NA	NA	NA	34157835	34162199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34158121_34159042_34159116_34161424
transcript_59145.nnic	chr17	+	672	2	Antisense	novelGene_ENSG00000261156.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	8	True	AATAAA	-22	NA	34178305	34183585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_34178545_34183152
transcript_59147.known	chr17	+	741	3	FSM	ENSG00000108691.9	ENST00000225831.4	741	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	4	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTTCCAGTGTTTTCT	34254766	True	NA	NA	False	AATAAA	-18	NA	34255284	34257203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34255426_34256221_34256340_34256721
transcript_59148.known	chr17	+	3055	20	FSM	ENSG00000005156.12	ENST00000262327.9	3055	20	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_19	74.4031095766934	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGGAAGCAGGTCCAGCAA	34973514	True	NA	NA	False	NA	NA	NA	34980545	35003172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35002994
transcript_59149.known	chr17	+	8382	20	FSM	ENSG00000005156.12	ENST00000378526.9	8382	20	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_1	26.1802826993153	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTAGGAGGGAAACTGA	34973480	True	NA	NA	False	NA	NA	NA	34980511	35009743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34980623_34983001_34983553_34985987_34986132_34989465_34989664_34990962_34991115_34991670_34991838_34991957_34992036_34992523_34992693_34994275_34994432_34996063_34996196_34996573_34996654_34997737_34997826_34998218_34998297_34998603_34998728_34999306_34999450_34999781_34999857_35001256_35001404_35001908_35002105_35002667_35002790_35004272
transcript_5915.known	chr1	-	1126	9	FSM	ENSG00000121310.17	ENST00000358358.9	1126	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	20.4446661748242	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTCTCTGAGTCTTGGTAT	-52920746	True	NA	-19	True	ATTAAA	-5	NA	52921726	52896232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_59152.known	chr17	-	1847	14	FSM	ENSG00000132141.14	ENST00000314144.10	1847	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_11	3.39334538463274	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAATATTTAAATATTT	-34961318	True	NA	60	True	AATAAA	-16	NA	34961460	34927860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34958559_34958695_34959586_34959651_34961256
transcript_59155.known	chr17	-	1639	13	FSM	ENSG00000132141.14	ENST00000436961.7	1639	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	3.93347457373532	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCTTAATAGTCTC	-34961316	True	NA	-11	True	AATAAA	-14	NA	34961458	34927931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_34928118_34928961_34929035_34930948_34931052_34932366_34932501_34939182_34939331_34939616_34939714_34940538_34940622_34942483_34942644_34942795_34942907_34951949_34952054_34954425_34954600_34959586_34959651_34961256
transcript_59161.known	chr17	-	7293	7	FSM	ENSG00000092871.17	ENST00000315249.11	7293	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_5	11.3968806648525	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAACATTGTTGGTATTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	35089319	35005989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35012150_35014739_35014764_35016369_35016581_35017522_35017607_35021370_35021782_35026373_35026562_35089104
transcript_59164.nnic	chr17	+	1520	3	NNC	ENSG00000198783.6	novel	667	2	NA	NA	0	5834	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	2	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATACTTGCATAGAGTAT	34958983	True	NA	NA	False	NA	NA	NA	34961539	34969611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34962869_34963023_34963111_34969507
transcript_59166.nnic	chr17	+	559	2	NNC	ENSG00000198783.6	novel	667	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCTCTTAGTGTGCTT	34958983	True	NA	20	True	CATAAA	-23	NA	34961539	34963186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_34961936_34963023
transcript_59167.known	chr17	+	667	2	FSM	ENSG00000198783.6	ENST00000578339.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTTCTCTTAGTGTGCTT	34962354	False	NA	20	True	CATAAA	-23	NA	34962364	34963186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_34962869_34963023
transcript_59169.known	chr17	-	9966	10	FSM	ENSG00000185379.21	ENST00000345365.11	9966	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_7	14.0712472794703	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCTCCTATAAATATGTCA	-35119849	False	NA	-19	True	AATAAA	-17	NA	35119860	35092220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35118500_35118620_35119110_35119173_35119531
transcript_59173.known	chr17	-	1064	9	FSM	ENSG00000185379.21	ENST00000460118.6	1064	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	25.0586811304985	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACATCTTGGGTTCCTTGGC	-35119733	False	286	NA	False	NA	NA	NA	35119744	35100826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107062_35107365_35107448_35119110_35119173_35119531
transcript_59174.known	chr17	-	1571	9	FSM	ENSG00000185379.21	ENST00000586044.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_7	17.3956711569287	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119735	False	286	-12	True	TATAAA	-15	NA	35119746	35100382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35106987_35107123_35107365_35107448_35119110_35119173_35119531
transcript_59178.known	chr17	-	1353	7	FSM	ENSG00000185379.21	ENST00000335858.11	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	22.0661883130428	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCCTAGAGCCACCTGATT	-35119734	False	286	-12	True	TATAAA	-15	NA	35119745	35100382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35101037_35101200_35101366_35103253_35103325_35103453_35103545_35106385_35106482_35119110_35119173_35119531
transcript_59183.known	chr17	-	5193	13	FSM	ENSG00000073536.18	ENST00000442241.9	5193	13	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_12	32.8032857432842	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCCCCCCAACCGGATCC	-35136930	True	NA	13	True	AATAAA	-39	NA	35142303	35128729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35132450_35133170_35133242_35133338_35133499_35135248_35135452_35136168_35136216_35136361_35136498_35137000_35137194_35137542_35137641_35137813_35137891_35139234_35139315_35139848_35140067_35141978_35142123_35142257
transcript_59184.known	chr17	+	10555	5	FSM	ENSG00000166750.10	ENST00000299977.9	10555	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	1.22474487139159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTTCTTCTTTCTTCT	35242447	True	NA	NA	False	AATAAA	-24	NA	35243071	35273655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35243144_35258650_35259703_35260970_35261097_35264182_35264904_35265071
transcript_59185.nic	chr17	+	1834	4	ISM	ENSG00000166750.10	ENST00000299977.9	10555	5	-22	8911	-21	-1616	5prime_fragment	FALSE	canonical	3	13	junction_2	0.471404520791032	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCGCAAGACCAGAGAGT	35242425	True	NA	NA	False	AATAAA	-24	NA	35243049	35264744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35243144_35258650_35259703_35260970_35261097_35264182
transcript_59186.known	chr17	+	1225	2	FSM	ENSG00000166750.10	ENST00000592325.1	1225	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAATTGTCTGACTTAT	35242464	True	NA	NA	False	NA	NA	NA	35243088	35259820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35243144_35258650
transcript_59188.known	chr17	+	1088	4	FSM	ENSG00000267364.3	ENST00000664542.1	1088	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.49691252107735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGCTACTCCATTTTCCAT	35313328	True	NA	NA	False	GATAAA	-12	NA	35313505	35325296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35321734_35321866_35323147_35323261_35324653
transcript_5919.nic	chr1	-	1147	8	NIC	ENSG00000121310.17	novel	2645	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	25.9213882218322	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGGTATCATTGGCTCT	NA	False	NA	-9	True	ATTAAA	-15	NA	52921785	52896222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_52896598_52899173_52899225_52904645_52904834_52905033_52905091_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_59190.known	chr17	+	1343	4	FSM	ENSG00000267364.3	ENST00000664469.1	1343	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	NA	False	NA	NA	False	AATATA	-31	NA	35313485	35325448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35321734_35321866_35323147_35323344_35324653
transcript_59193.known	chr17	+	1271	4	FSM	ENSG00000267364.3	ENST00000657419.1	1271	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.29983164553722	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	35313318	True	NA	NA	False	AATATA	-31	NA	35313495	35325448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35321734_35321866_35323147_35323344_35324653
transcript_59195.known	chr17	+	526	3	FSM	ENSG00000267364.3	ENST00000663051.2	540	3	14	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	35313318	True	NA	NA	False	ATTAAA	-21	NA	35313495	35324909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35323147_35323269_35324653
transcript_59197.known	chr17	+	1140	3	FSM	ENSG00000267364.3	ENST00000669048.1	1140	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	35313318	True	NA	NA	False	AATATA	-31	NA	35313495	35325448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313645_35323147_35323344_35324653
transcript_59199.known	chr17	+	1116	3	FSM	ENSG00000267364.3	ENST00000659130.2	1167	3	51	0	1	0	multi-exon	FALSE	canonical	3	6	junction_2	2	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGGTTATTTCCAGGTT	35313330	True	NA	NA	False	AATATA	-32	NA	35313507	35325449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35323147_35323269_35324653
transcript_59201.known	chr17	+	1219	3	FSM	ENSG00000267364.3	ENST00000662865.1	1219	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGGGTTATTTCCAGGT	NA	False	NA	NA	False	AATATA	-31	NA	35313478	35325448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35323147_35323344_35324653
transcript_59203.nnic	chr17	+	943	3	NNC	ENSG00000267364.3	novel	1343	4	NA	NA	0	-2545	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGTGCATTTTGTCC	35313318	True	NA	NA	False	AATAAA	-18	NA	35313495	35322364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_35313707_35319830_35319933_35321734
transcript_59204.nic	chr17	+	855	2	ISM	ENSG00000267364.3	ENST00000664542.1	1088	4	-24	2932	0	-2545	5prime_fragment	FALSE	canonical	3	9	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTTTGTGCATTTTGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	35313481	35322364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35313707_35321734
transcript_59205.known	chr17	+	764	4	FSM	ENSG00000267364.3	ENST00000585387.2	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGTCTCAGTCATTGGC	35313346	True	NA	NA	False	ATTAAA	-21	NA	35313523	35324909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35313707_35321736_35321866_35323147_35323344_35324653
transcript_59206.known	chr17	-	2506	4	FSM	ENSG00000172123.13	ENST00000304905.10	2506	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	5.8878405775519	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTCTCAAAACAAAACTCCA	-35432195	True	NA	NA	False	AATGAA	-19	NA	35432500	35410921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432187
transcript_59207.known	chr17	-	2423	4	FSM	ENSG00000172123.13	ENST00000452764.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.7196014438797	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTGGGAAAATTGCAACAC	-35433258	False	NA	-11	True	AATAAA	-17	NA	35433283	35411070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35411928_35420273_35420382_35421989_35423069_35432904
transcript_59216.known	chr17	-	8398	6	FSM	ENSG00000154760.14	ENST00000285013.11	8398	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	12.3773987574126	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAATGTTTTTACTCTGC	-35446995	True	NA	NA	False	AATAAA	-19	NA	35448766	35435095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35441367_35441562_35442287_35443788_35443921_35444614_35445694_35447267_35447415_35448721
transcript_59217.known	chr17	+	5700	22	FSM	ENSG00000006125.18	ENST00000610402.5	5700	22	0	0	0	0	multi-exon	TRUE	canonical	2	74	junction_14	66.82409982529	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTTTGTGGTATGTATT	35580321	True	NA	NA	False	AATAAA	-18	NA	35587321	35726413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35670856_35670899_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_59219.known	chr17	+	5702	21	FSM	ENSG00000006125.18	ENST00000621914.4	5702	21	0	0	0	0	multi-exon	FALSE	canonical	2	188	junction_9	38.4008788961919	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGAAGTTTGTGGTATG	35587142	False	NA	NA	False	AATAAA	-14	NA	35587273	35726409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35671753_35671901_35674175_35674322_35682694_35682825_35709223_35709309_35710233_35710321_35717194_35717350_35723624
transcript_5922.nic	chr1	-	1129	8	NIC	ENSG00000121310.17	novel	1126	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	28.2373323594052	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGAGTCTTGGTATC	NA	False	NA	-18	True	ATTAAA	-6	NA	52921785	52896231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_52896598_52897436_52897485_52899173_52899225_52904645_52904834_52907867_52907955_52911565_52911654_52911722_52911791_52921552
transcript_59220.nic	chr17	+	2535	15	NIC	ENSG00000006125.18	novel	2161	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_14	69.0255794053545	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTGTACAAGAGAGGGT	35587131	True	NA	12	True	AATAAA	-24	NA	35587262	35660120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598_35657792_35659763
transcript_59222.nnic	chr17	+	410	3	NNC	ENSG00000006125.18	novel	559	5	NA	NA	-11	-4594	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	101	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTGCCTTATTGGCCA	35587131	True	NA	NA	False	ATTAAA	-18	NA	35587262	35596391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_35587429_35594007_35594068_35596207
transcript_59223.known	chr17	+	2542	14	FSM	ENSG00000006125.18	ENST00000616784.4	2542	14	0	0	0	0	multi-exon	FALSE	canonical	2	188	junction_9	35.796102396009	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCATCTTTCTTCCCTT	35586787	False	NA	NA	False	NA	NA	NA	35586898	35657791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35587429_35594007_35594068_35598229_35598336_35605704_35605841_35608141_35608388_35624396_35624588_35626620_35626843_35627384_35627506_35627630_35627727_35636340_35636457_35639594_35639761_35641876_35641976_35650529_35650790_35657598
transcript_59224.nic	chr17	+	377	3	ISM	ENSG00000006125.18	ENST00000588093.1	334	4	-201	2759	8	-2707	5prime_fragment	FALSE	canonical	3	49	junction_1	104.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAAAGGAGGCTGTGAAGA	35580329	True	NA	NA	False	ACTAAA	-31	NA	35587329	35598278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35587598_35594007_35594068_35598229
transcript_59229.known	chr17	+	1504	3	FSM	ENSG00000267321.4	ENST00000638682.1	1504	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTACAAAATCATAACATAG	35565166	True	NA	NA	False	AATGAA	-37	NA	35568108	35574843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35568502_35573579_35573724_35573876
transcript_59230.known	chr17	-	1604	3	FSM	ENSG00000108733.11	ENST00000586663.2	1604	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTGAAAGGGAATCATGT	-35577960	True	NA	NA	False	ATTAAA	-15	NA	35578552	35575788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35576182_35577037_35577592_35577895
transcript_59231.known	chr17	+	1298	2	FSM	ENSG00000267321.4	ENST00000592381.1	1298	2	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_1	0	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAGTCTGAATGAAAAATT	35565177	True	NA	NA	False	TATAAA	-20	NA	35568119	35574792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35568502_35573876
transcript_59254.known	chr17	+	2140	16	FSM	ENSG00000270647.7	ENST00000604841.5	2140	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	19.2208220427743	680	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTTGTACATACTAGTGCA	35791492	True	NA	36	True	AATAAA	-20	NA	35809488	35847234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820240_35820331_35820438_35822639_35822834_35824077_35824199_35833906_35833942_35834565_35834599_35836131_35836242_35838423_35838554_35842366_35842460_35844076_35844159_35844279_35844369_35844476_35845039_35846905
transcript_59276.known	chr17	+	760	7	FSM	ENSG00000270647.7	ENST00000605197.3	2388	7	0	1628	0	627	multi-exon	FALSE	canonical	3	15	junction_1	2.51661147842358	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTTAGTTAAGAGACTTTA	35791509	True	NA	NA	False	NA	NA	NA	35809505	35824289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820163_35820249_35820331_35820438_35822639_35822834_35824077
transcript_59284.known	chr17	+	409	5	ISM	ENSG00000270647.7	ENST00000604879.6	641	7	0	11184	0	-68	5prime_fragment	FALSE	canonical	1	1	junction_3	7.59522876548166	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCAGCATGATTCCTATAG	35791487	True	NA	NA	False	NA	NA	NA	35809483	35822757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_35809577_35817715_35817756_35820023_35820076_35820331_35820438_35822639
transcript_59289.known	chr17	+	2103	1	FSM	ENSG00000270647.7	ENST00000604434.1	2103	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATGCCATTAATAATTTT	35791485	True	NA	NA	False	ATTAAA	-15	NA	35809481	35811584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_35809500_35811600
transcript_59295.known	chr17	-	1163	7	FSM	ENSG00000278023.7	ENST00000620284.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	13.5451918488526	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	-35930414	True	NA	-17	True	AATAAA	-16	NA	35930773	35918079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_59296.known	chr17	-	686	6	FSM	ENSG00000278023.7	ENST00000619193.4	686	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	14.142135623731	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGAATATCCCAAGG	-35930368	False	NA	NA	False	NA	NA	NA	35930727	35918341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35925514_35925638_35930075_35930256_35930631
transcript_59298.known	chr17	-	1032	6	FSM	ENSG00000278023.7	ENST00000616596.4	1032	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	16.004999218994	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGACGAGGCGGGGCCGCGG	-35930368	False	NA	-3	True	AATAAA	-30	NA	35930727	35918065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_59301.nnic	chr17	-	1012	6	NNC	ENSG00000278023.7	novel	779	5	NA	NA	-21	1084	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	17.1860408471527	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCTCTCAGAAGCTTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	35930794	35921070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_35921349_35922576_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_59302.known	chr17	-	587	5	FSM	ENSG00000278023.7	ENST00000615288.4	587	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.4696690920006	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCTGAATATCCCAAGG	-35930368	False	NA	NA	False	NA	NA	NA	35930727	35918341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35925514_35925638_35930075_35930256_35930631
transcript_59305.known	chr17	-	779	5	FSM	ENSG00000278023.7	ENST00000613308.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	8.06225774829855	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTATAGTATGCTTTCATT	-35930381	True	NA	-4	True	AATAAA	-20	NA	35930740	35922477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35922676_35924603_35924773_35925514_35925638_35930075_35930256_35930631
transcript_59311.known	chr17	-	1535	6	FSM	ENSG00000278023.7	ENST00000619262.4	1535	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_2	14.6205335059977	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATGGTAAATAACGGACG	-35930410	True	NA	-17	True	AATAAA	-16	NA	35930769	35918079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35918444_35920186_35920273_35922576_35922676_35924603_35924773_35925514_35925638_35930075
transcript_59312.known	chr17	-	588	4	FSM	ENSG00000275718.2	ENST00000617897.2	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGCTGAGCCCCAACA	NA	False	NA	NA	False	AATAAA	-17	NA	36001553	35997581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_35997861_35998279_35998392_35998865_35998926_36001416
transcript_59313.known	chr17	-	1458	2	FSM	ENSG00000276085.1	ENST00000612839.1	1458	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTATTGAGTTTGGTTTT	NA	False	NA	NA	False	AATAAA	-22	NA	36196747	36194868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36195377_36195797
transcript_59315.known	chr17	-	3931	26	FSM	ENSG00000278259.5	ENST00000614623.5	3931	26	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_14	30.0763295632961	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATCTGAATGTCAAGTTTT	-36529937	True	NA	-2	True	AGTAAA	-15	NA	36534868	36495635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36496407_36498265_36498560_36499074_36499161_36500829_36500960_36501068_36501236_36503096_36503201_36503949_36504021_36505296_36505405_36506455_36506609_36506962_36507140_36507398_36507513_36507802_36507925_36509061_36509136_36510745_36510918_36511364_36511456_36513428_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_59329.known	chr17	-	1640	11	FSM	ENSG00000278259.5	ENST00000621344.4	1640	11	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_8	18.0820352836731	900	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTGCTCACTTAGTTT	-36529937	True	NA	-23	True	ATTAAA	-21	NA	36534868	36513085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36525227_36525342_36527550_36527700_36528063_36528203_36532526_36532682_36533952_36534105_36534760
transcript_59334.known	chr17	-	1186	8	FSM	ENSG00000278259.5	ENST00000620640.4	1186	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_5	56.590545110631	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTACCGCATGATCAGAAGA	-36529965	True	NA	-103	True	NA	NA	NA	36534896	36513165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_36513506_36513628_36513726_36514445_36514549_36515112_36515183_36515857_36515991_36532526_36532682_36533952_36534105_36534760
transcript_59338.known	chr17	+	926	4	FSM	ENSG00000273611.5	ENST00000619730.4	926	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	252.248995152717	502	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCCTTTTTAAAGGA	NA	False	NA	80	True	AATAAA	-22	NA	36486628	36495823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36492812_36492900_36493925_36494007_36495222
transcript_59340.known	chr17	+	567	4	FSM	ENSG00000273611.5	ENST00000622312.4	567	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	287.567190216285	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATCTAAAGCCTTGGTTC	36482036	True	NA	NA	False	NA	NA	NA	36486693	36497917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36492817_36492900_36493925_36494007_36497605
transcript_59345.known	chr17	+	876	2	FSM	ENSG00000277161.2	ENST00000619326.1	876	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTCACTGAAGAGGTTAA	36534438	True	NA	NA	False	NA	NA	NA	36535019	36537934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36535055_36537093
transcript_59348.known	chr17	+	2816	2	FSM	ENSG00000277161.2	ENST00000614443.2	2816	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGGATTGTCAATACTTG	36534405	True	NA	32	True	AATAAA	-39	NA	36534986	36539303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36535593_36537093
transcript_59349.known	chr17	+	2264	2	FSM	ENSG00000277161.2	ENST00000620233.1	2264	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCAATACTTGTTTATTG	36535355	True	NA	39	True	TATAAA	-40	NA	36535554	36539310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36535602_36537093
transcript_59350.known	chr17	+	834	5	FSM	ENSG00000273611.5	ENST00000620324.4	834	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	249.78090399388	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGGGTTAGGGATGGATC	36482037	True	NA	NA	False	NA	NA	NA	36486694	36498148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36486934_36486967_36492812_36492900_36493925_36494007_36497605
transcript_59351.known	chr17	+	881	5	FSM	ENSG00000273611.5	ENST00000620863.4	881	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	230.175476539096	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTTCCTTTTTAAAGG	36482042	True	NA	79	True	AATAAA	-21	NA	36486699	36495822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36486934_36486967_36492817_36492900_36493925_36494007_36495222
transcript_59352.known	chr17	+	616	3	FSM	ENSG00000273611.5	ENST00000616269.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	289	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTACATTGCATTATT	36482070	True	NA	5	True	AATAAA	-15	NA	36486727	36495748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36486786_36486934_36486967_36495222
transcript_59353.known	chr17	+	2816	14	FSM	ENSG00000278311.5	ENST00000613102.5	2816	14	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	62.5453208462736	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTGTACATGTTTCTAC	36544719	False	NA	NA	False	AATAAA	-28	NA	36544918	36589848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049_36586199_36586996_36587246_36589207
transcript_59356.nic	chr17	+	1922	12	ISM	ENSG00000278311.5	ENST00000613102.5	2816	14	-41	3695	-34	0	5prime_fragment	TRUE	canonical	3	84	junction_1	63.0310168957244	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAGAAGAAGAAAAG	36544678	False	NA	NA	False	NA	NA	NA	36544877	36586153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_36545098_36545618_36545818_36554819_36554901_36557082_36557337_36560772_36560872_36567662_36567777_36577982_36578187_36579244_36579420_36581343_36581539_36585299_36585451_36585839_36585966_36586049
transcript_59362.known	chr17	+	2315	2	FSM	ENSG00000278311.5	ENST00000611219.1	2315	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAATATCTCAAAATAAC	36544712	False	NA	5	True	AATAAA	-17	NA	36544911	36547747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545098_36545618
transcript_59364.known	chr17	+	695	4	FSM	ENSG00000278311.5	ENST00000616019.1	695	4	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_2	16.3095064303001	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGAGATGTCAGTTGCA	36545304	False	NA	NA	False	AAAAAG	-8	NA	36545503	36560818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36545818_36554819_36554901_36557082_36557337_36560772
transcript_59368.known	chr17	+	883	4	FSM	ENSG00000278535.5	ENST00000621871.1	883	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	182.846626681733	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTGGATTTCATGGTG	36598143	False	NA	-31	True	NA	NA	NA	36598165	36600756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36598258_36598920_36599051_36599971_36600038_36600161
transcript_59369.known	chr17	+	1284	5	FSM	ENSG00000278619.5	ENST00000612760.1	1284	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.6961536499415	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	36601939	False	NA	13	True	AATAAA	-14	NA	36601961	36608964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36602177_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_59371.known	chr17	+	1839	5	FSM	ENSG00000278619.5	ENST00000614766.5	1839	5	0	0	0	0	multi-exon	FALSE	canonical	2	54	junction_1	16.6789538041209	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTGGGAGATTCTGGCCAAT	36601560	False	NA	13	True	AATAAA	-14	NA	36601582	36608964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36602353_36602552_36602647_36607669_36607803_36607898_36608019_36608242
transcript_59372.known	chr17	+	601	3	FSM	ENSG00000275613.2	ENST00000610398.2	601	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTTTTGTGGTTTTGA	NA	False	NA	NA	False	AAGAAA	-39	NA	36722442	36726346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36722809_36725347_36725381_36726144
transcript_59377.known	chr17	+	2007	12	FSM	ENSG00000275700.6	ENST00000679997.1	2007	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	159.364803190252	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCGCTTGTGATTTCTTA	NA	False	NA	30	True	AATAAA	-18	NA	36949007	37056871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031690_37056605
transcript_59381.known	chr17	+	2018	11	FSM	ENSG00000275700.6	ENST00000680340.1	2018	11	0	0	0	0	multi-exon	FALSE	canonical	1	21	junction_10	158.11214374614	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACCGCTTGTGATTTCTT	NA	False	NA	29	True	AATAAA	-17	NA	36948924	37056870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37056600
transcript_59382.known	chr17	+	1963	11	FSM	ENSG00000275700.6	ENST00000680579.1	1963	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	170.736785725865	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	NA	False	NA	17	True	AATAAA	-5	NA	36948924	37056858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36953769_36953908_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_59383.known	chr17	+	1940	11	FSM	ENSG00000275700.6	ENST00000616434.2	1940	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	172.248657469369	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGTTACCGCCACCACCGC	NA	False	NA	17	True	AATAAA	-5	NA	36948924	37056858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_36949217_36950213_36950406_36952885_36953297_36986616_36986732_36988518_36988721_36989246_36989412_36990773_36990858_37019004_37019073_37020933_37021015_37031613_37031686_37056600
transcript_59388.known	chr17	+	376	2	FSM	ENSG00000275700.6	ENST00000622432.1	376	2	0	0	0	0	multi-exon	TRUE	canonical	1	12	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCACCGCTTGTGATTTCT	NA	False	NA	28	True	AATAAA	-16	NA	37051134	37056869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37051242_37056600
transcript_5939.known	chr1	+	2759	16	FSM	ENSG00000116171.19	ENST00000371514.8	2759	16	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	344.763429357324	1423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTATCTGGACATAATCAC	52926774	True	NA	102	True	AATAAA	-30	NA	52927275	53051698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52950754_52950887_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_53014889_53015044_53027968_53028072_53038916_53039047_53047857_53047938_53050608
transcript_59397.nnic	chr17	+	974	3	Antisense	novelGene_ENSG00000278540.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGATCTGCAGAAGTTGT	NA	False	NA	NA	False	NA	NA	NA	37066529	37097703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_37066815_37096664_37096748_37097097
transcript_59400.known	chr17	-	569	2	FSM	ENSG00000278540.5	ENST00000614438.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATTGTTCTGTCTTACT	-37330383	False	NA	0	True	AATAAA	-24	NA	37330399	37328644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37328987_37330172
transcript_59409.known	chr17	+	4236	16	FSM	ENSG00000276234.5	ENST00000615182.5	4236	16	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	11.5123122496453	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATGACTCTTCTCTGTG	37404877	True	NA	2	True	AATAAA	-18	NA	37406885	37479725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_59419.known	chr17	+	1043	11	FSM	ENSG00000276234.5	ENST00000620367.4	1043	11	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	12.7608777127594	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTCCCCTTTATTAC	37404930	True	NA	4	True	AATAAA	-17	NA	37406938	37465653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430
transcript_5942.known	chr1	+	2003	11	FSM	ENSG00000116171.19	ENST00000371513.9	2003	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.1435497665897	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTAAGAGTTATGCTGT	52926816	True	NA	NA	False	AATAAA	-25	NA	52927317	52994232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_52927466_52941795_52941854_52948008_52948081_52954739_52954805_52961502_52961630_52974768_52974833_52976682_52976770_52978216_52978368_52980395_52980544_52988028_52988137_52993257
transcript_59439.nic	chr17	+	821	4	NIC	ENSG00000276234.5	novel	490	4	NA	NA	-8	204	combination_of_known_junctions	FALSE	canonical	1	5	junction_3	25.0377492776186	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTTGTCAGAAGAATAACACA	37404869	True	NA	NA	False	AATAAA	-17	NA	37406877	37426870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_37406950_37411268_37411391_37423508_37423616_37426350
transcript_59445.known	chr17	+	2211	17	FSM	ENSG00000276234.5	ENST00000620628.4	2211	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	20.8924889314318	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGGTGTGTCAAATAT	37404881	True	NA	16	True	ATTAAA	-17	NA	37406889	37478267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37406950_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796_37477491_37478053
transcript_59446.known	chr17	+	1948	16	FSM	ENSG00000276234.5	ENST00000612272.4	1948	16	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	18.0165356146945	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTCCTAACACCTCTTG	37405215	False	NA	3	True	ATTAAA	-13	NA	37407223	37477228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37407497_37411268_37411391_37423508_37423616_37426949_37427010_37437737_37437830_37440504_37440663_37442563_37442653_37444695_37444769_37458523_37458588_37462077_37462122_37465430_37465542_37467453_37467526_37470399_37470533_37471093_37471138_37474555_37474630_37476796
transcript_59447.known	chr17	+	1474	3	FSM	ENSG00000276023.5	ENST00000617516.5	1474	3	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_1	47.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGAATTTTTACTAATAAT	37489840	True	NA	NA	False	AATAAA	-18	NA	37489890	37513498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37489959_37510676_37510765_37512180
transcript_59449.known	chr17	+	1559	3	FSM	ENSG00000276023.5	ENST00000613659.1	1559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	153.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTTAACATATTAGAATTT	37491413	False	NA	NA	False	AATAAA	-7	NA	37491463	37513487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_37491628_37510676_37510765_37512180
transcript_5945.known	chr1	+	742	4	FSM	ENSG00000116171.19	ENST00000533119.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	389.149785501104	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATTCAGTTTAAGAGTTTT	53009283	True	NA	NA	False	AAAAAG	-45	NA	53014965	53051062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53015044_53038916_53039047_53047857_53047938_53050608
transcript_59453.nic	chr17	-	993	6	ISM	ENSG00000275066.5	ENST00000619976.1	1375	10	5	12489	5	0	5prime_fragment	FALSE	canonical	3	84	junction_4	14.3387586631479	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCATTGTTTTATAGTAA	-37604673	True	NA	NA	False	AATAAA	-17	NA	37609433	37584321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_59455.nnic	chr17	-	985	5	NNC	ENSG00000275066.5	novel	8141	22	NA	NA	12	-67	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	46.4455326161731	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCAGGGTCTGTTCTGAA	-37604609	True	NA	0	True	TATAAA	-18	NA	37609369	37514873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_37515505_37586449_37586550_37596222_37596345_37600362_37600404_37609278
transcript_59457.known	chr17	-	1375	10	FSM	ENSG00000275066.5	ENST00000619976.1	1375	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.7366819151205	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAACTTTATACCGTTCT	-37604678	True	NA	NA	False	NA	NA	NA	37609438	37571832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37571988_37576340_37576419_37577446_37577614_37579131_37579435_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_5946.known	chr1	+	671	4	FSM	ENSG00000116171.19	ENST00000484100.5	671	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	365.141372925915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGTTTTGCTTACAAAG	53009283	True	NA	NA	False	AATAAA	-43	NA	53014965	53051018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53015044_53027968_53028072_53047857_53047938_53050608
transcript_59462.known	chr17	-	8141	22	FSM	ENSG00000275066.5	ENST00000612223.5	8141	22	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_16	19.9836668000522	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGGCTACTAAGCCTTT	-37604658	True	NA	-14	True	AATACA	-13	NA	37609418	37514806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37519072_37520178_37520215_37520537_37520649_37535978_37536128_37538323_37538421_37539191_37539246_37540379_37540544_37541971_37542566_37553114_37554060_37561194_37561258_37561470_37561590_37568790_37568925_37570636_37570886_37571790_37571988_37576340_37576419_37577379_37577614_37584647_37584760_37585324_37585431_37586418_37586550_37596222_37596345_37600362_37600404_37609278
transcript_59465.known	chr17	-	6383	15	FSM	ENSG00000278053.5	ENST00000617633.5	6383	15	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_12	43.3856108000083	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGACTCAGCCTACTCTT	-37637235	True	NA	-4	True	AATAAA	-35	NA	37643446	37609738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_37614354_37618291_37618385_37619767_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_59480.nic	chr17	-	1724	13	ISM	ENSG00000278053.5	ENST00000617633.5	6383	15	-49	10029	-49	0	5prime_fragment	FALSE	canonical	3	336	junction_10	43.9926603726879	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAATCTTGAATTTACCT	NA	False	NA	0	True	CATAAA	-22	NA	37643495	37619767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_37619840_37620872_37620949_37621126_37621278_37621397_37621521_37624343_37624435_37625894_37626099_37626787_37626861_37628560_37628673_37630029_37630174_37632112_37632299_37633287_37633419_37642109_37642309_37643333
transcript_59485.nic	chr17	-	343	2	ISM	ENSG00000278053.5	ENST00000613633.1	776	6	-62	15302	-49	-11319	5prime_fragment	FALSE	canonical	3	471	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGACGATGACTTCAGGT	NA	False	NA	15	True	AAGAAA	-5	NA	37643495	37642127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_37642309_37643333
transcript_59488.known	chr17	-	1643	12	FSM	ENSG00000274487.3	ENST00000649858.2	1815	12	172	0	2	0	multi-exon	FALSE	canonical	2	8	junction_9	108.205574167839	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCAGAATCTGAAACTTTT	NA	False	NA	NA	False	NA	NA	NA	38257192	38195702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38195941_38196366_38196472_38197545_38197711_38201104_38201220_38202071_38202106_38202237_38202335_38202780_38202982_38205634_38205743_38208994_38209117_38219045_38219124_38242200_38242286_38256897
transcript_59503.known	chr17	+	1553	8	FSM	ENSG00000278845.5	ENST00000613675.5	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_4	38.1115441292841	2666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTTAGCCTTTGATTGTG	38297141	True	NA	12	True	TATAAA	-18	NA	38297167	38323211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38320617_38320768_38322125_38322300_38322508
transcript_59507.known	chr17	+	1554	7	FSM	ENSG00000278845.5	ENST00000619548.1	1554	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	286.545371625507	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTGATTGTGTTCTTA	NA	False	NA	18	True	TATAAA	-24	NA	38297022	38323217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38297250_38298448_38298627_38299350_38299469_38306532_38306632_38318686_38318736_38322125_38322300_38322508
transcript_59522.known	chr17	-	482	4	FSM	ENSG00000276170.5	ENST00000617855.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	28.1780056072107	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAGAAATTAGCCA	-38451991	True	NA	-27	True	NA	NA	NA	38452444	38450587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451394_38451625_38451757_38452317
transcript_59536.nic	chr17	-	1142	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-292	0	146	0	multi-exon	FALSE	canonical	3	46	junction_2	12.5	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451764	False	NA	NA	False	AATAAA	-33	NA	38452217	38450393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451526_38451625
transcript_59542.nic	chr17	-	948	3	FSM	ENSG00000276170.5	ENST00000692656.1	850	3	-292	194	146	0	multi-exon	FALSE	canonical	3	46	junction_2	12.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATACAGAAATTAGCCA	-38451764	False	NA	-27	True	NA	NA	NA	38452217	38450587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451526_38451625
transcript_59543.known	chr17	-	419	2	FSM	ENSG00000276170.5	ENST00000622796.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAGCCCGAGGAACATGG	-38451493	False	NA	-65	True	NA	NA	NA	38451946	38450625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451625
transcript_59545.known	chr17	+	5911	24	FSM	ENSG00000275832.5	ENST00000622683.5	5911	24	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	29.3979282476708	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGAGTCAGCTGTCTCA	38427673	True	NA	28	True	AATAAA	-14	NA	38428463	38512385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38428549_38458101_38458264_38460904_38460933_38462845_38462942_38463117_38463197_38463327_38463383_38466166_38467332_38469143_38469300_38469523_38469636_38469846_38469905_38471862_38472007_38477578_38477897_38479435_38479498_38479752_38479884_38482021_38482144_38482522_38482679_38486061_38486141_38490101_38490176_38490461_38490552_38491406_38491533_38497784_38497827_38498413_38498511_38500596_38500629_38509943
transcript_59546.known	chr17	-	702	4	FSM	ENSG00000276170.5	ENST00000617990.5	734	4	32	0	32	0	multi-exon	FALSE	canonical	3	38	junction_2	13.8162545173751	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGCTCAAAGAGAACAA	-38451946	True	NA	NA	False	AATAAA	-33	NA	38452399	38450393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38450724_38451305_38451394_38451625_38451828_38452317
transcript_59547.known	chr17	-	643	2	FSM	ENSG00000276170.5	ENST00000619955.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGGAGCCTCTCCGCTC	-38451450	False	NA	NA	False	AATAAA	-13	NA	38451903	38451160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38451526_38451625
transcript_59554.known	chr17	-	486	2	FSM	ENSG00000275532.2	ENST00000618407.2	494	2	0	8	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAAAATGTCAGTCCTAA	NA	False	NA	-23	True	AATAAA	-18	NA	38706261	38703479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38703758_38706053
transcript_59558.known	chr17	+	2296	1	FSM	ENSG00000277969.1	ENST00000612330.1	2296	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	31	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCGTGTGAGAGCGTC	NA	False	NA	NA	False	AATAAA	-20	NA	38702451	38704747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38702500_38704700
transcript_59561.known	chr17	-	3062	12	FSM	ENSG00000277258.5	ENST00000616199.4	3062	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	52.6741111312861	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCCTGTAGTTCTTTGG	NA	False	NA	-4	True	AATAAA	-15	NA	38749817	38733897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195_38748309_38749361
transcript_59567.nnic	chr17	-	1370	11	NIC	ENSG00000277258.5	novel	2634	11	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_5	51.3070170639456	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGAGCCTGTAGTTCTTT	NA	False	NA	-6	True	AATAAA	-13	NA	38748405	38733899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38734254_38735491_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_59570.known	chr17	-	1534	11	FSM	ENSG00000277258.5	ENST00000616129.4	1534	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	50.0880225203591	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	NA	False	NA	-25	True	AATATA	-43	NA	38748378	38735043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878_38747972_38748195
transcript_59577.known	chr17	-	2179	10	FSM	ENSG00000277258.5	ENST00000611883.4	2179	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	49.418844808658	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCCAATTGCCCCTCCAC	-38746617	False	NA	NA	False	NA	NA	NA	38746628	38734279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38746467
transcript_59580.nnic	chr17	-	1464	10	NIC	ENSG00000277258.5	novel	1534	11	NA	NA	-27	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	48.2907858705985	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTATGGACCAACCAGATT	NA	False	NA	-25	True	AATATA	-43	NA	38748405	38735043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738752_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38748195
transcript_59586.known	chr17	+	2552	4	FSM	ENSG00000277972.2	ENST00000613478.2	2552	4	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	40.3429740544194	391	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAGTGGGGAGGAGAGA	38728071	True	NA	NA	False	NA	NA	NA	38730340	38735605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38730407_38730759_38730796_38731319_38731440_38733275
transcript_59588.known	chr17	+	2098	1	FSM	ENSG00000277182.1	ENST00000610658.1	2098	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGTAAATTCATTCTTAA	NA	False	NA	NA	False	AATAGA	-16	NA	38749359	38751457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38749400_38751500
transcript_59589.known	chr17	-	1499	10	FSM	ENSG00000277258.5	ENST00000618941.4	1499	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	45.6897751751478	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCGGGTTTTATAAATAAAT	-38748173	False	NA	-35	True	NA	NA	NA	38748184	38735108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38735601_38736089_38736171_38738352_38738449_38738540_38738596_38738748_38738862_38739067_38739119_38739197_38739254_38739585_38739683_38740290_38740443_38747878
transcript_59594.known	chr17	+	762	6	FSM	ENSG00000277791.5	ENST00000619426.5	762	6	0	0	0	0	multi-exon	FALSE	canonical	3	2579	junction_5	148.776879924268	13070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724830	True	NA	27	True	AATAAA	-16	NA	38752740	38764225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760430_38760609_38762410_38762506_38764118
transcript_59595.known	chr17	+	552	5	FSM	ENSG00000277791.5	ENST00000620309.4	552	5	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	1167.35373816166	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724862	True	NA	27	True	AATAAA	-16	NA	38752772	38764225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38762410_38762506_38764118
transcript_59596.known	chr17	+	662	6	FSM	ENSG00000277791.5	ENST00000613870.4	662	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	1140.99791410852	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38724853	True	NA	27	True	AATAAA	-16	NA	38752763	38764225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752830_38753149_38753335_38755882_38755991_38760507_38760609_38762410_38762506_38764118
transcript_59597.known	chr17	+	510	4	FSM	ENSG00000277791.5	ENST00000610434.4	510	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1372.77245828368	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGAGTCCCTCTGGGAGC	38724836	True	NA	NA	False	NA	NA	NA	38752746	38760580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38752814_38753149_38753335_38755882_38755991_38760430
transcript_59598.known	chr17	+	426	3	FSM	ENSG00000277791.5	ENST00000614132.4	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	2579	junction_2	119.5	366	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTGTCTTTGAT	38760351	False	NA	27	True	AATAAA	-16	NA	38760384	38764225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38760609_38762410_38762506_38764118
transcript_5960.known	chr1	+	2699	5	FSM	ENSG00000157184.7	ENST00000371486.4	2699	5	0	0	0	0	multi-exon	TRUE	canonical	3	225	junction_3	24.4182308941496	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTTCTTAATTTCTTTT	53191783	True	NA	8	True	AATAAA	-19	NA	53196823	53214197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53197096_53200718_53200800_53202322_53202430_53210014_53211320_53213263
transcript_59604.known	chr17	-	927	8	FSM	ENSG00000276293.5	ENST00000617781.1	927	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	39.3840328155501	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGAGTGCAGTGCAGTGG	NA	False	NA	NA	False	NA	NA	NA	38799522	38776603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38776626_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
transcript_59605.known	chr17	-	5383	10	FSM	ENSG00000276293.5	ENST00000619039.5	5383	10	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_2	13.7517675631575	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTATGTGTGAGTCC	NA	False	NA	-8	True	AATAAA	-20	NA	38799556	38765690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38769772_38770435_38770540_38771013_38771273_38777686_38777801_38778333_38778373_38779382_38779530_38780451_38780605_38784242_38784340_38786822_38786921_38799265
transcript_5961.known	chr1	-	490	1	FSM	ENSG00000162384.14	ENST00000602807.1	490	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGTCTTGGAAAGCTT	-53216452	True	NA	0	True	ATTAAA	-21	NA	53220576	53220086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53220100_53220600
transcript_59610.nic	chr17	-	2191	11	NIC	ENSG00000273559.5	novel	1894	11	NA	NA	5	254	combination_of_known_junctions	FALSE	canonical	3	14	junction_6	39.5030378578661	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTGTTTGGTCAATGAC	-38824948	False	NA	-2	True	AAAAAG	-17	NA	38825350	38801470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810275_38810401_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_59611.known	chr17	-	1894	11	FSM	ENSG00000273559.5	ENST00000619299.4	1894	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	47.8465254746883	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTCTCTGGTGTCACCCA	-38824913	True	NA	NA	False	NA	NA	NA	38825315	38801724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38815624_38815742_38820900_38821074_38825165
transcript_59612.known	chr17	-	3067	10	FSM	ENSG00000273559.5	ENST00000614790.5	3067	10	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	23.4841685575518	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCGACCACCTGTGGAGTA	-38824919	True	NA	-8	True	AATAAA	-30	NA	38825321	38800440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38802207_38802699_38802862_38806296_38806396_38806764_38806977_38809701_38809766_38810467_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_59619.known	chr17	-	976	6	FSM	ENSG00000273559.5	ENST00000622665.1	976	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.2046261441174	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGATGAACACTTGAACAT	-38824904	True	NA	NA	False	NA	NA	NA	38825306	38810353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38810596_38812794_38812861_38814860_38815098_38815624_38815742_38820900_38821074_38825165
transcript_5962.known	chr1	-	1102	8	FSM	ENSG00000162384.14	ENST00000294360.5	1102	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	45.6499547354314	2494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTGTTATCTTCAGTTG	-53216510	True	NA	0	True	ATTAAA	-18	NA	53220634	53214098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260_53220345_53220569
transcript_59620.nic	chr17	-	688	5	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-29	10132	5	-219	5prime_fragment	FALSE	canonical	3	101	junction_3	10.5593560409714	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAGAAGAAGAAAAAGAAGG	-38824948	False	NA	-1	True	NA	NA	NA	38825350	38810572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_38810596_38812794_38812865_38814860_38815098_38820900_38821074_38825165
transcript_59622.nic	chr17	-	665	4	ISM	ENSG00000273559.5	ENST00000614790.5	3067	10	-29	12354	5	-2441	5prime_fragment	FALSE	canonical	3	101	junction_2	12.1197726417986	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGTATACCAGATAA	-38824948	False	NA	NA	False	ATTAAA	-35	NA	38825350	38812794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_38812865_38814860_38815098_38820900_38821074_38825165
transcript_5963.known	chr1	-	1009	7	FSM	ENSG00000162384.14	ENST00000470385.5	1009	7	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_6	30.259984578097	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGATGGTATCTCCCCA	-53216468	True	NA	82	True	AATGAA	-11	NA	53220592	53214374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53214737_53215990_53216057_53216781_53216860_53218171_53218204_53218413_53218496_53218866_53218924_53220260
transcript_59630.known	chr17	-	588	5	FSM	ENSG00000125691.14	ENST00000245857.9	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	3917.6953285701	4093	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	-38793935	False	NA	-16	True	AATAAA	-25	NA	38853428	38850080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853301
transcript_59640.known	chr17	-	625	6	FSM	ENSG00000125691.14	ENST00000394332.5	625	6	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_1	3412.1314511607	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCACTAAATGTTTTCCTT	-38794229	True	NA	NA	False	ATTAAA	-17	NA	38853722	38847864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38848040_38850116_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_59641.known	chr17	-	2706	5	FSM	ENSG00000125691.14	ENST00000479035.7	2706	5	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_4	1166.50618836764	7111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAATGTTTTCCTTTGTCA	-38794228	True	NA	NA	False	ATTAAA	-22	NA	38853721	38847859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697
transcript_59642.known	chr17	-	615	4	FSM	ENSG00000125691.14	ENST00000577407.5	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	6387	junction_3	1297.36305207482	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAATAAAAAAAAAAACTA	-38794244	True	NA	6	True	NA	NA	NA	38853737	38850113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_38850476_38852603_38852733_38853021_38853106_38853697
transcript_59643.nnic	chr17	-	975	6	NNC	ENSG00000125691.14	novel	588	5	NA	NA	-1937	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	3519.31563801828	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTGTTTGCAGTGCTTG	NA	False	NA	-16	True	AATAAA	-25	NA	38855701	38850080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_38850215_38850361_38850476_38852603_38852733_38853021_38853106_38853697_38853703_38855192
transcript_59648.known	chr17	+	3910	7	FSM	ENSG00000002834.18	ENST00000318008.11	3910	7	0	0	0	0	multi-exon	FALSE	canonical	3	449	junction_6	23.6008474424119	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTTCCTCTCTGGCTC	38863635	True	NA	33	True	AATAAA	-22	NA	38870057	38921770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38870259_38878085_38878181_38890419_38890505_38898411_38898520_38914324_38914476_38915042_38915147_38918604
transcript_59649.nnic	chr17	+	695	4	NNC	ENSG00000002834.18	novel	1167	4	NA	NA	-10	-7414	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	242.773328207381	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTTGAGAAGTTTTGTA	38863598	True	NA	NA	False	AATAAA	-16	NA	38870020	38891786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_38870259_38878085_38878181_38890419_38890505_38891509
transcript_59652.known	chr17	+	3692	2	FSM	ENSG00000263874.2	ENST00000583195.2	3692	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	209	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTCTGAAGAATTATAAATTA	38925154	False	NA	NA	False	AATAAA	-22	NA	38925167	38929384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_38925892_38926416
transcript_59654.known	chr17	+	2698	4	FSM	ENSG00000214553.11	ENST00000647826.2	2714	4	0	16	0	-6	multi-exon	FALSE	canonical	0	0	junction_1	19.3275853524323	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATTCACTCTGCAAAGAAT	39033098	False	NA	-1	True	AATAAA	-31	NA	39033108	39053199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39033446_39034169_39034242_39044387_39046342_39052864
transcript_59658.nic	chr17	+	637	5	NIC	ENSG00000263818.5	novel	2305	5	NA	NA	-9	-8239	combination_of_known_junctions	TRUE	canonical	1	6	junction_3	2.1650635094611	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGAGGTCTCACTGTGTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	39057009	39073212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_39057160_39061096_39061189_39063421_39063547_39072466_39072592_39073067
transcript_59661.known	chr17	+	2305	5	FSM	ENSG00000263818.5	ENST00000583447.5	2305	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.35410196624968	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAATAC	39056816	True	NA	NA	False	NA	NA	NA	39057018	39081451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39057160_39063421_39063547_39072466_39072592_39073067_39073334_39079803
transcript_59662.known	chr17	-	1753	13	FSM	ENSG00000067191.16	ENST00000394310.7	1753	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_7	17.2183687445188	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGGTGTCTGTGGTTT	-39196004	True	NA	NA	False	NA	NA	NA	39197702	39177135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39177536_39177983_39178080_39183712_39183865_39184030_39184141_39184324_39184384_39184783_39184865_39185130_39185151_39186495_39186573_39186792_39186930_39187478_39187602_39191473_39191594_39194883_39194971_39197411
transcript_59665.known	chr17	+	792	6	FSM	ENSG00000108298.12	ENST00000582193.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	6160.2156001231	37506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATCTGCCTTCCTCTCTGCT	39051179	True	NA	24	True	AATAAA	-10	NA	39200344	39204720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39200479_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_59668.known	chr17	+	1330	5	FSM	ENSG00000108298.12	ENST00000678573.1	1330	5	0	0	0	0	multi-exon	FALSE	canonical	3	13753	junction_4	1016.14738104273	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATAGATCAGCCATTAAA	39200493	False	NA	-10	True	AATAAA	-38	NA	39200506	39204686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_59669.known	chr17	+	1051	6	FSM	ENSG00000108298.12	ENST00000579260.5	1051	6	0	0	0	0	multi-exon	FALSE	canonical	3	1265	junction_1	5674.85391530037	5539	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCCTTAATCTGCCTTC	39051176	True	NA	15	True	AATAAA	-1	NA	39200341	39204711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39200744_39201212_39201320_39202316_39202440_39202988_39203110_39204076_39204188_39204524
transcript_59670.known	chr17	+	1247	5	FSM	ENSG00000108298.12	ENST00000577741.2	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	10414	junction_1	2025.40100967685	5007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTCTCTGCTTCTTGCA	39051151	True	NA	31	True	AATAAA	-17	NA	39200316	39204727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39200350_39201212_39201320_39202316_39203110_39204076_39204188_39204524
transcript_59672.known	chr17	-	1620	15	FSM	ENSG00000108306.13	ENST00000577399.5	1620	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.38344811876192	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGGAGGTGGTCAACCTT	-39402172	True	NA	NA	False	NA	NA	NA	39402523	39261459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39261568_39264174_39264388_39265396_39265454_39268826_39268872_39270795_39270857_39274969_39275101_39281388_39281464_39282728_39282856_39285477_39285574_39297126_39297196_39298989_39299085_39301000_39301076_39303584_39303640_39343179_39343242_39402172
transcript_59674.known	chr17	-	8137	17	FSM	ENSG00000125686.12	ENST00000300651.11	8137	17	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	3.20156211871642	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-39445645	True	NA	-32	True	AATAAA	-20	NA	39451263	39404284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_59679.known	chr17	-	2870	18	FSM	ENSG00000125686.12	ENST00000394287.7	2870	18	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	5.34744384817107	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGCCTGTGTGTAATAAAA	-39445650	True	NA	-32	True	AATAAA	-20	NA	39451268	39404284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39405309_39410580_39410722_39415025_39415132_39415243_39415340_39419716_39419919_39423326_39423446_39423696_39423822_39424626_39424739_39427700_39427791_39431114_39431189_39431941_39432017_39434248_39434321_39439164_39439194_39440385_39440519_39440622_39440678_39443549_39443629_39447797_39447905_39451037
transcript_59680.known	chr17	+	8287	14	FSM	ENSG00000167258.15	ENST00000447079.6	8287	14	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_13	17.1232911728942	321	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTTTTGCTCCATTGCAT	39453637	True	NA	6	True	ATTAAA	-18	NA	39461485	39534544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39463118_39470878_39471764_39490556_39490734_39492750_39492891_39494523_39494695_39501249_39501440_39509704_39509762_39511528_39511631_39515730_39515809_39517439_39517557_39519955_39520088_39524673_39524886_39525863_39526317_39530603
transcript_59681.known	chr17	+	1815	7	FSM	ENSG00000131771.14	ENST00000254079.9	1815	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	4.52462398683274	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGAGACTCCTCTTTCA	39626149	True	NA	14	True	AATAAA	-14	NA	39626951	39636624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39627474_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_59682.known	chr17	+	1504	7	FSM	ENSG00000131771.14	ENST00000394267.2	1504	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	27.92499875659	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGAGACTCCTCTTTCAGG	39628375	True	NA	16	True	AATAAA	-16	NA	39628497	39636626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39628707_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_59683.known	chr17	+	1419	7	FSM	ENSG00000131771.14	ENST00000394265.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	30.5104717906638	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGACTCCTCTTTCAG	39628375	True	NA	15	True	AATAAA	-15	NA	39628497	39636625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39628623_39629169_39629231_39629539_39629563_39629971_39630048_39633882_39634087_39635606_39635727_39635815
transcript_59685.known	chr17	+	1466	5	FSM	ENSG00000131771.14	ENST00000579000.5	1466	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	36.6674242345982	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGCTGAGACTCCTCTTT	39627165	False	NA	12	True	AATAAA	-12	NA	39627199	39636622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39627474_39629169_39629231_39633882_39634087_39635606_39635727_39635815
transcript_59692.known	chr17	+	2770	15	FSM	ENSG00000131748.16	ENST00000336308.10	2770	15	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	22.2633816673323	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAGTGCTCAGTAATCAAT	39631951	True	NA	12	True	ATTAAA	-18	NA	39637143	39664201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_59694.nic	chr17	+	2048	14	NIC	ENSG00000131748.16	novel	2770	15	NA	NA	-40	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	108.097534306185	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631857	True	NA	37	True	ATTAAA	-27	NA	39637049	39663484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39657972_39658027_39658404_39658523_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_59697.known	chr17	+	1949	14	FSM	ENSG00000131748.16	ENST00000394250.8	1949	14	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_4	113.782206572664	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTTTGTATTAAGCCAAT	39631951	True	NA	-13	True	NA	NA	NA	39637143	39663434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774_39657853_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662345_39662803
transcript_59701.known	chr17	+	1989	14	FSM	ENSG00000131748.16	ENST00000580611.5	1989	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	154.230519854009	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCAGCCCCTCCCACTGCC	39631960	True	NA	37	True	ATTAAA	-27	NA	39637152	39663484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657774_39657853_39657972_39658027_39658404_39658523_39658721_39658821_39659050_39659107_39659460_39659554_39660210_39660274_39660430_39660527_39660809_39660890_39660980_39661086_39662250_39662368_39662803
transcript_59702.known	chr17	+	554	4	FSM	ENSG00000131748.16	ENST00000580551.5	554	4	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	18.1169043222683	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAGGGCTGGTGGAAGGGA	39631946	True	NA	NA	False	NA	NA	NA	39637138	39657887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39637232_39653480_39653751_39657007_39657086_39657774
transcript_59703.known	chr17	+	960	2	FSM	ENSG00000173991.6	ENST00000309889.3	960	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCATCTCTTTCCTTGTG	39665335	False	NA	19	True	AATAAA	-20	NA	39665348	39666554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39665470_39665715
transcript_59705.known	chr17	+	821	3	FSM	ENSG00000141744.4	ENST00000394246.1	821	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.5	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCTGCGGTCAGTGCTGTG	39667967	False	NA	3	True	AATAAA	-15	NA	39667980	39670473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39668071_39669628_39669837_39669950
transcript_59706.nnic	chr17	+	848	3	NNC	ENSG00000141744.4	novel	821	3	NA	NA	444	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	9.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTCAGTGCTGTGTG	39668879	False	NA	5	True	AATAAA	-17	NA	39668906	39670475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_39669022_39669628_39669837_39669950
transcript_59707.known	chr17	+	958	3	FSM	ENSG00000141744.4	ENST00000269582.3	958	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGGTCAGTGCTGTGTG	39668418	False	NA	5	True	AATAAA	-17	NA	39668452	39670475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39668678_39669628_39669837_39669950
transcript_59708.known	chr17	-	2687	8	FSM	ENSG00000161395.14	ENST00000300658.9	2687	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	23.5415394915594	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39686187	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_59709.known	chr17	-	2533	7	FSM	ENSG00000161395.14	ENST00000378011.8	2533	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	45.4120028186382	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-39686187	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39673651_39673992_39674055_39674616_39674680_39685921_39686020_39687833
transcript_59710.known	chr17	-	3028	7	FSM	ENSG00000161395.14	ENST00000309862.10	3028	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	22.5345413877353	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCCCTTGTTCAGCTCA	-39686187	True	NA	-3	True	AATAAA	-16	NA	39688057	39671122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39673050_39673256_39673513_39674055_39674616_39674680_39684596_39684750_39685921_39686020_39687833
transcript_59721.known	chr17	+	849	4	FSM	ENSG00000141736.14	ENST00000584014.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	8.33999733546454	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTCGCAGGACAGAAGA	39687712	True	NA	NA	False	NA	NA	NA	39688100	39695181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39688279_39688695_39688801_39693260_39693326_39694680
transcript_59724.known	chr17	-	2220	4	FSM	ENSG00000161395.14	ENST00000579146.5	2220	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	65.4488774201327	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCCCTTGTTCAGCTCAT	-39686187	True	NA	-2	True	AATAAA	-17	NA	39688057	39671121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39672867_39684596_39684750_39685921_39686020_39687833
transcript_59727.known	chr17	-	1397	4	FSM	ENSG00000141741.12	ENST00000394231.8	1397	4	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	28.3117564901148	6433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTCTGTACAAAGCCTGG	-39723999	True	NA	NA	False	AGTAAA	-15	NA	39730532	39728509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729606_39729684_39729762_39730193_39730292_39730406
transcript_59732.known	chr17	-	706	3	FSM	ENSG00000141741.12	ENST00000474210.1	706	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	384	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723999	True	NA	-6	True	AGTAAA	-20	NA	39730532	39729155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729606_39729684_39729762_39730353
transcript_59735.known	chr17	-	806	3	FSM	ENSG00000141741.12	ENST00000577810.1	806	3	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_2	33.5	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTAACTAGTGTGTGTT	-39723977	True	NA	-8	True	AGTAAA	-18	NA	39730510	39729157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729762_39730193_39730292_39730406
transcript_59736.known	chr17	-	825	3	FSM	ENSG00000141741.12	ENST00000469568.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	772	junction_1	24.5	1028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAACTAGTGTGTGTTTT	-39723958	True	NA	-6	True	AGTAAA	-20	NA	39730491	39729155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729606_39729684_39729762_39730193
transcript_59737.known	chr17	-	925	2	FSM	ENSG00000141741.12	ENST00000498164.2	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_1	0	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAATGCTAACTAGTGTGTG	-39723983	True	NA	-10	True	AGTAAA	-16	NA	39730516	39729159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39729762_39730193
transcript_59740.known	chr17	+	2233	15	FSM	ENSG00000141738.14	ENST00000309156.9	2233	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	38.4567077029085	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39737324	True	NA	24	True	AATAAA	-18	NA	39737937	39747285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39738134_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_59742.known	chr17	+	2093	15	FSM	ENSG00000141738.14	ENST00000394211.7	2093	15	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	23.8824715843983	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39736748	True	NA	24	True	AATAAA	-18	NA	39738336	39747285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_59743.known	chr17	+	1955	15	FSM	ENSG00000141738.14	ENST00000394209.6	1955	15	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	46.3964724204462	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACGGGATGAGGAGCGGGA	39739924	False	NA	NA	False	NA	NA	NA	39739966	39746988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39740182_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39745912_39746001_39746108_39746203_39746750
transcript_59747.nic	chr17	+	2047	14	NIC	ENSG00000141738.14	novel	2093	15	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_12	38.9223168061991	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATGAGTTCTGTCTGGCA	39736706	True	NA	24	True	AATAAA	-18	NA	39738294	39747285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_39738393_39742251_39742457_39742565_39742717_39742897_39743055_39743179_39743302_39743392_39743471_39744069_39744208_39744552_39744664_39744885_39744985_39745242_39745324_39745421_39745539_39745727_39745789_39746108_39746203_39746750
transcript_5976.known	chr1	-	656	5	FSM	ENSG00000162385.11	ENST00000371470.8	656	5	0	0	0	0	multi-exon	FALSE	canonical	3	1069	junction_2	88.03550420143	15758	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAACTCTTCTCAATT	-53223547	True	NA	-16	True	AATAAA	-44	NA	53238518	53226899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53227145_53228871_53228955_53233541_53233653_53235576_53235636_53238360
transcript_59762.known	chr17	-	1468	10	FSM	ENSG00000073605.19	ENST00000360317.7	1468	10	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	13.7679176187089	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTTTTGAAGCCTCA	-39917288	False	NA	0	True	ATTAAA	-23	NA	39917316	39904594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39904965_39905425_39905497_39905846_39905986_39906110_39906272_39906960_39906988_39908175_39908215_39908957_39909043_39909755_39909925_39912325_39912498_39917081
transcript_59765.known	chr17	-	2106	4	FSM	ENSG00000172057.10	ENST00000579695.5	2106	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	19.3448241713959	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTCTGGCCTTCGCTT	-39920706	True	NA	-12	True	AATAAA	-22	NA	39927601	39921040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924221_39927483
transcript_59766.known	chr17	-	2109	4	FSM	ENSG00000172057.10	ENST00000304046.7	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	9.46337971105226	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCTGTGTCTGGCCTTCGC	-39920706	True	NA	-14	True	AATAAA	-20	NA	39927601	39921042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_39922686_39923111_39923264_39924029_39924226_39927483
transcript_59769.known	chr17	+	2147	12	FSM	ENSG00000108344.15	ENST00000264639.9	2147	12	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_3	63.9788188090273	1670	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTGCATCAGTTACTAT	39955868	True	NA	16	True	AATAAA	-16	NA	39980806	39997959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_39981191_39984293_39984485_39986574_39986713_39988682_39988820_39989738_39989930_39990093_39990198_39994953_39995069_39995175_39995296_39995423_39995528_39996182_39996339_39997329_39997381_39997503
transcript_5977.known	chr1	-	500	4	FSM	ENSG00000162385.11	ENST00000371466.4	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_2	479.704307070744	4314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTATTATTTTATAAAGA	-53223528	True	NA	-42	True	AATAAA	-18	NA	53238499	53226925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53227145_53228871_53228955_53235576_53235636_53238360
transcript_59771.known	chr17	-	3480	26	FSM	ENSG00000008838.21	ENST00000394128.7	3480	26	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_25	41.7057118390275	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGACTGTGTGTGCTGT	-40049941	True	NA	-13	True	AATAAA	-17	NA	40054408	40019103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40019646_40019784_40019934_40020272_40020354_40021954_40022055_40022393_40022485_40022644_40022827_40023130_40023396_40026155_40026332_40026646_40026747_40026855_40027035_40027382_40027466_40027908_40027947_40028825_40028969_40029747_40029860_40031158_40031246_40031537_40031621_40032042_40032091_40032648_40032763_40033055_40033207_40033344_40033457_40035116_40035350_40035721_40035796_40036115_40036155_40053297_40053381_40053468_40053636_40054360
transcript_59775.known	chr17	+	2538	10	FSM	ENSG00000126351.13	ENST00000264637.8	2538	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	5.80123443653627	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGTCTGCCTCCTCCCCC	40062798	False	NA	17	True	CATAAA	-18	NA	40062809	40093867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40063093_40074191_40074542_40076870_40076939_40077507_40077609_40083834_40083983_40084609_40084816_40086706_40086854_40088241_40088501_40089205_40089334_40093019
transcript_59777.known	chr17	-	2630	8	FSM	ENSG00000126368.6	ENST00000246672.4	2630	8	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	8.65200224555813	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGCTTCTGTGGTGTGTG	-40100001	True	NA	-6	True	NA	NA	NA	40100589	40092792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40093283_40093911_40094123_40094934_40095121_40095443_40096088_40096442_40096588_40096690_40096780_40097064_40097404_40100063
transcript_59780.known	chr17	-	604	3	FSM	ENSG00000008838.21	ENST00000580302.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	76	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAATCCTCTCATCTTG	NA	False	NA	NA	False	NA	NA	NA	40054742	40053347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40053381_40053468_40053658_40054360
transcript_59781.known	chr17	-	454	5	NNC	ENSG00000008838.21	novel	3896	25	NA	NA	-7	16	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	109.392641434422	1	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATAAAGCTCCTCGTGG	-40053573	False	4467	-38	True	NA	NA	NA	40053615	40019128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_40019293_40035774_40035796_40036115_40036155_40053297_40053381_40053468
transcript_59783.known	chr17	+	3890	14	FSM	ENSG00000108349.17	ENST00000264645.12	3890	14	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_13	58.8052648289048	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCCCTTGCCAGTGTTTTG	40126932	True	NA	18	True	AATAAA	-19	NA	40140536	40172171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752_40161912_40162001_40162154_40162724_40162902_40163480_40164167_40166796_40166862_40167497_40167613_40167849_40167949_40168202_40168418_40169323_40169447_40169597_40169663_40170446
transcript_59784.known	chr17	+	580	4	FSM	ENSG00000108349.17	ENST00000581849.1	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_2	18.2391520270726	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAAGTGGGTAAAAAGGGC	40126932	True	NA	NA	False	NA	NA	NA	40140536	40162023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40140780_40141206_40141235_40141569_40141608_40161752
transcript_59787.known	chr17	+	7492	8	FSM	ENSG00000171475.14	ENST00000323571.9	7492	8	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	10.2180312812844	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCCTCCTGACTTGAAA	40217210	True	NA	16	True	AATAAA	-21	NA	40219303	40284136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40219493_40256390_40256523_40260534_40260668_40262524_40262642_40264489_40265147_40273789_40274000_40277082_40277185_40278184
transcript_5979.known	chr1	+	1295	3	FSM	ENSG00000226754.2	ENST00000458151.2	1295	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATATATATATATATATA	NA	False	NA	NA	False	AAAAAG	-22	NA	53238549	53242837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53239346_53241846_53241946_53242437
transcript_59799.known	chr17	+	4564	12	FSM	ENSG00000094804.12	ENST00000209728.9	4564	12	0	0	0	0	multi-exon	FALSE	canonical	3	679	junction_11	49.0477925131521	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGCCACAGATGTTTCT	40269477	True	NA	9	True	AATAAA	-19	NA	40287878	40304657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40288091_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_5980.known	chr1	+	567	3	FSM	ENSG00000225675.2	ENST00000445039.2	567	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGTACTTCCTTTAAGT	53328076	True	NA	NA	False	NA	NA	NA	53328232	53336509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53328376_53331167_53331252_53336169
transcript_59803.known	chr17	+	1948	12	FSM	ENSG00000094804.12	ENST00000649662.1	1948	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	227.280908943642	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTATCTCTAG	40269531	True	NA	-79	True	CATAAA	-41	NA	40287932	40302236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40287950_40289407_40289599_40291057_40291340_40291468_40291669_40293455_40293632_40293949_40294057_40294363_40294504_40295355_40295457_40296702_40296768_40300827_40301031_40301467_40301609_40301911
transcript_59822.known	chr17	+	2024	9	FSM	ENSG00000131759.18	ENST00000394089.6	2024	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	17.0861786248418	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCAGTACTGGGGACCTTC	40317065	True	NA	NA	False	NA	NA	NA	40318280	40356331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40318449_40330856_40331397_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_59824.known	chr17	+	2285	8	FSM	ENSG00000131759.18	ENST00000394081.7	2285	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	13.3141017767797	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTATACTGAAGGAATTTG	40342247	True	NA	7	True	NA	NA	NA	40342362	40356795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40342868_40348315_40348465_40349783_40349926_40351909_40352071_40352330_40352508_40354301_40354507_40355262_40355422_40356008
transcript_59825.known	chr17	-	5695	35	FSM	ENSG00000131747.15	ENST00000423485.6	5695	35	0	0	0	0	multi-exon	TRUE	canonical	1	587	junction_4	173.805694815138	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCATAGAATGCCTCTTTTA	-40393709	True	NA	-5	True	AATAAA	-19	NA	40417896	40388524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40389648_40389964_40390165_40391505_40391641_40392067_40392112_40392217_40392342_40392584_40392738_40395448_40395540_40396282_40396466_40398557_40398642_40398772_40398938_40399039_40399132_40399871_40400068_40400208_40400410_40400528_40400664_40400849_40401082_40402905_40403055_40404151_40404274_40404376_40404492_40404790_40404884_40406383_40406494_40406583_40406690_40406831_40406943_40407548_40407675_40407966_40408125_40408491_40408631_40411108_40411247_40411353_40411456_40411644_40411819_40412758_40412972_40413194_40413293_40413479_40413626_40416004_40416069_40416421_40416513_40416739_40416896_40417770
transcript_59833.nic	chr17	-	496	4	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-87	27508	-87	-2553	5prime_fragment	FALSE	canonical	3	1306	junction_2	40.5736641458745	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCTTGTATTAGAGTCACA	NA	False	NA	NA	False	NA	NA	NA	40417983	40416032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_40416069_40416421_40416513_40416739_40416896_40417770
transcript_59835.nic	chr17	-	254	2	ISM	ENSG00000131747.15	ENST00000423485.6	5695	35	-87	28330	-87	-3375	5prime_fragment	FALSE	canonical	3	1390	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAGATGCTAAGAAAAGAC	NA	False	NA	-33	True	AATAAA	-7	NA	40417983	40416854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_40416896_40417770
transcript_59836.known	chr17	-	420	2	FSM	ENSG00000131747.15	ENST00000577541.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCATAGAATGCCTCTTTT	-40389556	False	NA	-6	True	AATAAA	-18	NA	40389602	40388525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40388859_40389515
transcript_59837.known	chr17	+	2205	4	FSM	ENSG00000141753.7	ENST00000269593.5	2205	4	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_1	25.381533094402	195	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATTGTGTTTGGTTGAT	40437552	True	NA	12	True	AAAACA	-23	NA	40443449	40457725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40444085_40452984_40453143_40453927_40454063_40456448
transcript_59839.known	chr17	-	2488	12	FSM	ENSG00000073584.20	ENST00000644701.1	2488	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	416.864982006333	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGAAAAAAAGGTCTCAG	-40639966	True	NA	NA	False	AATAAA	-6	NA	40647837	40627721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630207_40630287_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_59841.known	chr17	-	2491	12	FSM	ENSG00000073584.20	ENST00000647294.1	2491	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	441.340744654923	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGTCCAAATGTAATAAAAA	-40639973	True	NA	NA	False	AATAGA	-44	NA	40647844	40627744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40639980_40640079_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_59843.known	chr17	-	2492	11	FSM	ENSG00000073584.20	ENST00000643683.1	2492	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	348.992320832422	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTATATGTTTCTTAAAG	-40647586	False	NA	NA	False	AATAGA	-26	NA	40647641	40627762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647452
transcript_59844.known	chr17	-	5150	11	FSM	ENSG00000073584.20	ENST00000348513.12	5150	11	0	0	0	0	multi-exon	FALSE	canonical	3	1043	junction_2	75.0392563929041	1387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTTTTTAAGAGCCTGA	-40639947	True	NA	0	True	ATTAAA	-18	NA	40647818	40624961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645575_40645620_40645795_40645848_40647772
transcript_59851.known	chr17	-	2388	10	FSM	ENSG00000073584.20	ENST00000578112.6	2388	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	364.730070999579	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCAGTGTTTTTAATGC	-40639977	True	NA	NA	False	AATAAA	-18	NA	40647848	40627709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40642454_40642560_40645795_40645848_40647772
transcript_59852.known	chr17	-	2840	10	FSM	ENSG00000073584.20	ENST00000647508.1	2840	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_7	358.912279939483	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAAAAAGGTCTCAGTGT	-40648315	False	NA	NA	False	AATAAA	-9	NA	40648370	40627718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_59856.known	chr17	-	2229	9	FSM	ENSG00000073584.20	ENST00000646283.1	2229	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	497.855337924582	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTATATCTGATGGTATATG	-40639968	True	NA	NA	False	AATAGA	-16	NA	40647839	40627772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631712_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40645795_40645848_40647772
transcript_59862.known	chr17	-	2319	6	FSM	ENSG00000073584.20	ENST00000493660.6	2319	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	454.588869199412	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAATAACCAGTCTCAAAAA	-40639971	True	NA	NA	False	NA	NA	NA	40647842	40634162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40636103_40636394_40636527_40637491_40637573_40645575_40645620_40645795_40645848_40647772
transcript_59863.known	chr17	-	2764	6	FSM	ENSG00000213424.9	ENST00000394049.5	2764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.82842712474619	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-40665068	True	NA	NA	False	AATAAA	-19	NA	40665156	40654664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40664921
transcript_59864.known	chr17	-	2703	6	FSM	ENSG00000213424.9	ENST00000394052.5	2703	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.4142135623731	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTATTGCAGTGTTAAAAAA	-40665089	True	NA	NA	False	AATAAA	-19	NA	40665177	40654664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40656631_40657351_40657488_40657673_40657751_40659986_40660208_40661915_40662045_40665003
transcript_5987.known	chr1	-	4552	18	FSM	ENSG00000058804.12	ENST00000371429.4	4552	18	0	0	0	0	multi-exon	TRUE	canonical	3	503	junction_9	46.8326180951595	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAACAGTTAATTGAAATA	-53832168	True	NA	-22	True	AATAAA	-18	NA	53838296	53765477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_59870.known	chr17	-	2156	4	FSM	ENSG00000073584.20	ENST00000474246.2	2156	4	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_2	4.32049379893857	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATGACCCTAGTTATGCAT	-40639975	True	NA	-9	True	AATAAA	-16	NA	40647846	40640573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40642560_40645575_40645620_40645795_40645848_40647772
transcript_59871.known	chr17	-	2828	3	FSM	ENSG00000073584.20	ENST00000643806.1	2828	3	0	0	0	0	multi-exon	FALSE	canonical	3	1152	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTATTGTTGACCATAAA	-40639953	True	NA	NA	False	NA	NA	NA	40647824	40642895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40645620_40645795_40645848_40647772
transcript_59872.known	chr17	+	1419	1	FSM	ENSG00000278834.1	ENST00000619697.1	1419	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAGAAGGGATTTCAGT	40647829	False	NA	NA	False	ATTAAA	-16	NA	40648299	40649718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40648300_40649700
transcript_59873.known	chr17	-	1704	8	FSM	ENSG00000073584.20	ENST00000578044.6	1704	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	400.987251056943	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTTGCCTTGTTTTGTGTG	-40648341	False	NA	20	True	AAAAAG	-6	NA	40648396	40628784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40628994_40630713_40630925_40631591_40631694_40632194_40632368_40635930_40636103_40636394_40636527_40637491_40637573_40647772
transcript_59880.nic	chr17	+	649	4	NIC	ENSG00000167920.11	novel	611	4	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	42.1294301989582	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTTGTGTGTGTGTGG	40818039	True	NA	2	True	ATTAAA	-12	NA	40819088	40836267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_40819209_40833114_40833200_40834381_40834520_40835961
transcript_59883.known	chr17	+	854	3	FSM	ENSG00000167920.11	ENST00000436612.5	854	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	51	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTAGTTTTCATGACTTCT	40818056	True	NA	9	True	AATAAA	-15	NA	40819105	40835085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819171_40833114_40833200_40834381
transcript_59884.known	chr17	+	2070	3	FSM	ENSG00000167920.11	ENST00000301665.8	2070	3	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	9	1134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTGTGTGTGTGGTTT	40818063	True	NA	5	True	ATTAAA	-15	NA	40819112	40836270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819209_40833114_40833200_40834381
transcript_59886.known	chr17	+	1164	3	FSM	ENSG00000167920.11	ENST00000654043.1	1164	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	52	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTGCATCTGGAATATGA	40818129	True	NA	8	True	AATAAA	-23	NA	40819178	40835359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40819280_40833114_40833200_40834381
transcript_59888.known	chr17	-	2163	8	FSM	ENSG00000186395.9	ENST00000635956.2	2163	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.0937311256219	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	40822614	40818116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40818483_40818766_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_59889.known	chr17	-	2143	8	FSM	ENSG00000186395.9	ENST00000269576.6	2143	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	492.697365405531	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAATTTGTCAGAATTTA	NA	False	NA	-2	True	AATAAA	-22	NA	40822614	40818116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_40818483_40818786_40819162_40819516_40819735_40820048_40820175_40820261_40820424_40820510_40820668_40821034_40821118_40821958
transcript_59890.known	chr17	+	789	2	FSM	ENSG00000167920.11	ENST00000670968.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTAGTTTTCATGACT	NA	False	NA	6	True	AATAAA	-12	NA	40833111	40835082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_40833200_40834381
transcript_59893.known	chr17	-	1390	6	FSM	ENSG00000171345.13	ENST00000361566.7	1390	6	0	0	0	0	multi-exon	FALSE	canonical	3	1126	junction_5	79.8298189901493	1004	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGACGTTTGGTTTATT	-41525899	True	NA	-6	True	AATAAA	-19	NA	41528308	41523616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41523998_41524142_41524269_41524378_41524541_41524842_41525000_41525190_41525274_41527827
transcript_59896.known	chr17	-	1517	8	FSM	ENSG00000128422.18	ENST00000311208.13	1517	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	3.88087934491604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAATGTGTCCTTGTTCTG	NA	False	NA	-2	True	AATAAA	-18	NA	41624575	41619441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965_41621092_41621592_41621755_41622354_41622512_41622949_41623033_41624077
transcript_59897.known	chr17	-	684	4	FSM	ENSG00000128422.18	ENST00000649249.1	684	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	1.63299316185545	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTCCTTGCCTGATGAC	-41621163	True	NA	-45	True	NA	NA	NA	41621201	41619484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41619689_41620535_41620559_41620658_41620880_41620965
transcript_59901.known	chr17	+	2338	4	FSM	ENSG00000173812.11	ENST00000469257.2	2338	4	0	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	325.419046086051	20806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTTGGTGACTTTTT	41632428	True	NA	11	True	AATAAA	-17	NA	41688884	41692668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689070_41689777_41689942_41690087_41690190_41690781
transcript_59915.known	chr17	+	1120	3	FSM	ENSG00000173812.11	ENST00000310837.8	1120	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2284	2436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTTCAGAAATACCTG	41632444	False	NA	6	True	AATAAA	-2	NA	41688900	41691630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689070_41690087_41690190_41690781
transcript_59919.known	chr17	+	1428	3	FSM	ENSG00000173812.11	ENST00000482111.1	1428	3	0	0	0	0	multi-exon	FALSE	canonical	3	3824	junction_1	386.5	2363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACTTGTTTTCAGA	41632438	False	NA	-2	True	TTTAAA	-10	NA	41688894	41691622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41689070_41689777_41690190_41690781
transcript_59920.known	chr17	+	2170	2	FSM	ENSG00000173812.11	ENST00000462917.1	2170	2	0	0	0	0	multi-exon	FALSE	canonical	3	4597	junction_1	0	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACTTGCAGATTATTTA	41632428	True	NA	22	True	AATAAA	-18	NA	41688884	41691646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41690190_41690781
transcript_59921.known	chr17	+	465	3	FSM	ENSG00000184502.4	ENST00000329402.4	465	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGACTGTGTCAGTGT	41712319	True	NA	NA	False	AATAAA	-16	NA	41712330	41715969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41712388_41715431_41715648_41715777
transcript_59922.known	chr17	-	3880	10	FSM	ENSG00000173805.16	ENST00000341193.9	3880	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	8.09358837843303	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGCCTCCAGCTGTCTC	-41733820	True	NA	-1	True	AATAAA	-18	NA	41734644	41722639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41725155_41725858_41725898_41727052_41727145_41728200_41728332_41731492_41731560_41731637_41731744_41731936_41732119_41732229_41732395_41732694_41732799_41734165
transcript_59924.known	chr17	-	3298	15	FSM	ENSG00000173801.17	ENST00000393930.5	3298	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	135.594326682835	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41771791	False	NA	-1	True	AATAAA	-19	NA	41785155	41754603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41784946
transcript_59927.known	chr17	-	3200	15	FSM	ENSG00000173801.17	ENST00000310706.9	3200	15	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_14	75.8590597013667	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCTGTTTAGGGGAGTGG	-41773334	True	NA	-1	True	AATAAA	-19	NA	41786698	41754603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41755433_41755729_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_59929.known	chr17	-	3505	14	FSM	ENSG00000173801.17	ENST00000393931.8	3505	14	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_13	66.7112474215884	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGGAGGCTGTTTAGGGG	-41773347	True	NA	-6	True	AATAAA	-14	NA	41786711	41754608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41755896_41756174_41756215_41757414_41757537_41757633_41757785_41758398_41758519_41758714_41758871_41762982_41763322_41764712_41764817_41764922_41765068_41767378_41767581_41768968_41769208_41769417_41769678_41771646_41771863_41786587
transcript_59935.known	chr17	+	2585	10	FSM	ENSG00000141756.19	ENST00000321562.9	2585	10	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	20.0929936809259	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTTAGGGTGTCTTTTG	41799427	True	NA	13	True	AATAAA	-13	NA	41813003	41823213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381_41818528_41819209_41819400_41819529_41819676_41820268_41820462_41820946_41821090_41821653_41821818_41822222
transcript_59961.known	chr17	+	598	5	FSM	ENSG00000141756.19	ENST00000585664.5	598	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	39.4358656555172	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCCTGGCCTATGGCGA	41812605	False	NA	NA	False	GGGGCT	-44	NA	41812679	41818496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41812740_41813192_41813280_41817057_41817204_41818088_41818279_41818381
transcript_59968.nic	chr17	+	1486	4	ISM	ENSG00000141756.19	ENST00000321562.9	2585	10	-285	4243	24	474	5prime_fragment	FALSE	canonical	3	74	junction_3	11.0855260988773	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGGGTGCTTTATT	41812606	True	NA	NA	False	NA	NA	NA	41812718	41818970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_41813280_41817057_41817204_41818088_41818279_41818381
transcript_59972.nic	chr17	+	1342	3	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-272	4241	22	474	5prime_fragment	FALSE	canonical	3	14	junction_1	30	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAAGGGGTGCTTTATT	41812604	True	NA	NA	False	NA	NA	NA	41812716	41818970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_41813280_41818088_41818279_41818381
transcript_59973.nic	chr17	+	1533	3	ISM	ENSG00000141756.19	ENST00000585664.5	598	5	94	-473	-16	473	intron_retention	FALSE	canonical	3	90	junction_2	5.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGGGGTGCTTTAT	41812661	False	NA	NA	False	NA	NA	NA	41812773	41818969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_41813280_41817057_41817204_41818088
transcript_59974.nic	chr17	+	1444	2	ISM	ENSG00000141756.19	ENST00000489591.5	2826	9	-272	4242	22	473	intron_retention	FALSE	canonical	3	14	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAGAAGGGGTGCTTTAT	41812604	True	NA	NA	False	NA	NA	NA	41812716	41818969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_41813280_41818088
transcript_59984.nic	chr17	-	1395	9	NIC	ENSG00000141698.17	novel	1408	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	179.617258009914	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATAATGTGTGAAACAG	-41828073	True	NA	-49	True	TTTAAA	-17	NA	41836286	41825226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836078
transcript_59985.known	chr17	-	1408	9	FSM	ENSG00000141698.17	ENST00000435506.7	1408	9	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	133.413829867821	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGCCTGATTGTGTCTG	-41828019	True	NA	NA	False	NA	NA	NA	41836232	41825056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_59988.nic	chr17	-	1127	8	NIC	ENSG00000141698.17	novel	1408	9	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_1	206.075872692857	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAATGAAAAAAAAG	NA	False	NA	-22	True	AATATA	-21	NA	41836295	41825199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_41825658_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_59991.known	chr17	-	730	8	FSM	ENSG00000141698.17	ENST00000415460.5	730	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	204.078716305693	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGCGGCGGGAGCGCTAC	-41828028	True	NA	NA	False	NA	NA	NA	41836241	41825653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41825658_41827425_41827627_41828789_41828953_41832391_41832478_41835069_41835117_41835202_41835273_41835858_41835958_41836181
transcript_59995.known	chr17	-	993	7	FSM	ENSG00000141698.17	ENST00000521789.5	993	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	249.051812993914	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTAAAATGAAAAAAAAG	-41828047	True	NA	-22	True	AATATA	-21	NA	41836260	41825199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41825658_41828789_41828953_41830800_41830891_41832391_41832478_41835069_41835117_41835202_41835273_41836181
transcript_59998.known	chr17	-	4293	29	FSM	ENSG00000131473.17	ENST00000352035.7	4293	29	0	0	0	0	multi-exon	TRUE	canonical	3	805	junction_16	278.84096850048	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGCTGGCTCCTGGCATC	-41882131	True	NA	-17	True	AATAAA	-23	NA	41918951	41866917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41896619_41896650_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_6.known	ERCC-00013	+	792	1	FSM	ERCC-00013A	EF011062	792	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00013_+_0_800
transcript_60.known	ERCC-00126	+	1111	1	FSM	ERCC-00126A	DQ459427	1111	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00126_+_0_1100
transcript_6000.nic	chr1	-	2397	17	NIC	ENSG00000058804.12	novel	4552	18	NA	NA	-41	-2242	combination_of_known_junctions	FALSE	canonical	3	27	junction_16	142.407371210201	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGCATTGATGGCAGTC	-53836540	True	NA	-16	True	AATAAA	-18	NA	53838504	53767719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53768034_53772328_53772490_53787157_53787259_53789132_53789197_53793228_53793280_53796688_53796805_53796898_53797145_53800692_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53838204
transcript_60001.known	chr17	-	3682	28	FSM	ENSG00000131473.17	ENST00000393896.6	3682	28	0	0	0	0	multi-exon	TRUE	canonical	3	423	junction_27	336.773193430598	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTGCTCTGCTACCTGCT	-41882202	True	NA	-13	True	AATAAA	-20	NA	41919022	41867573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41867905_41868708_41868786_41869042_41869126_41869473_41869588_41871688_41871833_41872031_41872183_41873810_41873966_41878102_41878197_41878796_41878925_41883121_41883233_41884192_41884275_41886111_41886309_41887598_41887704_41892278_41892448_41893032_41893175_41897748_41897840_41898630_41898786_41901695_41901814_41904728_41904791_41905521_41905659_41906527_41906647_41907441_41907573_41908988_41909069_41909509_41909701_41910221_41910285_41912419_41912543_41913714_41913901_41918879
transcript_60009.nic	chr17	-	682	5	ISM	ENSG00000131473.17	ENST00000353196.5	4318	28	-18	42614	-15	694	5prime_fragment	FALSE	canonical	3	1179	junction_4	135.024071927934	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGTTGGTCCACGCCCC	-41882217	True	NA	NA	False	NA	NA	NA	41919037	41909544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_41909701_41910221_41910285_41912419_41912543_41913714_41913897_41918879
transcript_60010.known	chr17	+	3146	12	FSM	ENSG00000204815.10	ENST00000377540.6	3146	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.66597787247549	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCTCACTCACTTCCT	41930417	True	NA	NA	False	AATAAA	-38	NA	41930616	41966503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41930838_41935216_41935349_41935598_41935750_41936472_41936535_41936761_41936928_41938556_41938782_41938964_41939173_41945135_41945223_41949152_41949350_41955216_41955318_41961381_41961467_41964992
transcript_60017.known	chr17	-	1909	15	FSM	ENSG00000168259.17	ENST00000585866.6	1909	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	282.193856150306	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTGGACAGGGAGGCAGCT	-42007903	True	NA	-36	True	NA	NA	NA	42017439	41976530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42003358_42003558_42017339
transcript_60023.known	chr17	-	1774	14	FSM	ENSG00000168259.17	ENST00000426588.7	1774	14	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_13	209.428752483664	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAAAAAAGAG	-42014387	False	9536	16	True	NA	NA	NA	42017151	41976478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017039
transcript_60024.known	chr17	-	1729	14	FSM	ENSG00000168259.17	ENST00000674166.1	1729	14	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_13	203.699395647072	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGAGGCAGCTTGTGAATT	-42014398	False	9536	-28	True	NA	NA	NA	42017162	41976522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017051
transcript_60025.known	chr17	-	1692	14	FSM	ENSG00000168259.17	ENST00000674214.1	1692	14	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_13	178.367879932784	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCGGGGGTGGACAGGGA	-42015762	True	NA	-43	True	NA	NA	NA	42018526	41976537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_60028.known	chr17	-	1713	13	FSM	ENSG00000168259.17	ENST00000316603.12	1713	13	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_12	221.277101290566	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGCATTGTCTCCAGTC	-42007885	True	NA	-2	True	AATAAA	-33	NA	42017421	41976420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42017339
transcript_60048.known	chr17	+	5172	4	FSM	ENSG00000173786.17	ENST00000393892.8	5172	4	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_2	3.39934634239519	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTGTATTTGATTCCAT	41964159	True	NA	12	True	AATAAA	-21	NA	41966794	41977740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41966888_41968067_41968741_41971891_41972032_41973474
transcript_60051.known	chr17	+	1644	4	FSM	ENSG00000168256.18	ENST00000393880.5	1644	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	132.926880485309	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	42014327	True	NA	NA	False	NA	NA	NA	42020096	42024774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020270_42021563_42021672_42022398_42022641_42023653
transcript_60053.known	chr17	-	1989	4	FSM	ENSG00000187595.17	ENST00000461831.1	1989	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.33999733546454	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTGTGTCCTAATTC	-42028434	True	NA	0	True	AATAAA	-17	NA	42028689	42025575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42027134_42027617_42027729_42028049_42028247_42028566
transcript_60056.known	chr17	+	2583	4	FSM	ENSG00000173786.17	ENST00000393888.1	2583	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	139.557236366382	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGCAGTCTCTCTTACC	41964179	True	NA	17	True	AATAAA	-17	NA	41966814	41975176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_41966888_41968072_41968741_41971891_41972032_41973474
transcript_60057.known	chr17	-	1876	15	FSM	ENSG00000168259.17	ENST00000586335.2	1876	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	273.63005712689	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAATGTTTTGACCCTTCC	-42007895	True	NA	-38	True	ATTAAA	-20	NA	42017431	41976456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987594_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_60058.known	chr17	-	1658	13	FSM	ENSG00000168259.17	ENST00000674306.1	1658	13	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_10	231.743392570317	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAAAAAAGAGAATAAA	-42007907	True	NA	22	True	ATTAAA	-4	NA	42017443	41976472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41976771_41977260_41977324_41981854_41982008_41982254_41982402_41983562_41983637_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41997114_41997240_42000481_42000571_42017339
transcript_60059.known	chr17	-	2124	10	FSM	ENSG00000168259.17	ENST00000674175.1	2124	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	238.195738577631	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATACATGAAGGTGTTTG	-42007891	True	NA	NA	False	NA	NA	NA	42017427	41986591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41987695_41987818_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42017339
transcript_60060.known	chr17	-	912	4	FSM	ENSG00000168259.17	ENST00000674425.1	912	4	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_3	128.805624445864	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAAAGAATTTGAGTAAA	-42007895	True	NA	NA	False	NA	NA	NA	42017431	41995818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41996425_41997114_41997240_42000481_42000571_42017339
transcript_60061.known	chr17	+	1598	4	FSM	ENSG00000168256.18	ENST00000393881.7	1598	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	133.868094281896	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAGAAAAAAAAAAAAAATTC	42014327	True	NA	NA	False	NA	NA	NA	42020096	42024774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020205_42021544_42021672_42022398_42022641_42023653
transcript_60062.known	chr17	+	1461	4	FSM	ENSG00000168256.18	ENST00000449471.8	1461	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	116.810387665938	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAGCAGATGGGCCTCACT	42014336	True	NA	NA	False	NA	NA	NA	42020105	42024833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42020205_42021563_42021672_42022398_42022473_42023653
transcript_60063.known	chr17	-	2243	9	FSM	ENSG00000168259.17	ENST00000590847.2	2243	9	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	200.038746246821	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTTATCTATAATAGCAAAA	-42015730	True	NA	NA	False	NA	NA	NA	42018494	41986565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_41987911_41988731_41988897_41989403_41989558_41990263_41990383_41994869_41994945_41996310_41996425_41997114_41997240_42000481_42000571_42018437
transcript_60066.nic	chr17	-	1413	6	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_2	12.9089116504839	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	NA	False	NA	0	True	AATAAA	-21	NA	42107873	42101403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42101947_42102215_42102313_42103607_42103799_42104765_42104928_42105017_42105168_42107603
transcript_60068.nnic	chr17	-	1201	5	NNC	ENSG00000108771.13	novel	2591	14	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	23.2741809737743	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	NA	False	NA	0	True	AATAAA	-21	NA	42107873	42101403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_42101947_42102215_42102292_42104765_42104928_42105017_42105168_42107603
transcript_60070.nic	chr17	-	1222	5	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	22.8582589013249	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	NA	False	NA	0	True	AATAAA	-21	NA	42107873	42101403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42101947_42102215_42102313_42104765_42104928_42105017_42105168_42107603
transcript_60074.nnic	chr17	-	880	3	NIC	ENSG00000108771.13	novel	2591	14	NA	NA	5	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	29.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	-42107735	True	NA	0	True	AATAAA	-21	NA	42107843	42101403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42101947_42102215_42102313_42107603
transcript_60075.known	chr17	-	782	3	FSM	ENSG00000108771.13	ENST00000589979.1	782	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGTGTCTTAATTTTG	-42104799	False	NA	0	True	AATAAA	-21	NA	42104907	42101403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42101947_42102215_42102313_42104765
transcript_60082.known	chr17	-	1640	6	FSM	ENSG00000108774.15	ENST00000346213.9	1640	6	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_2	31.6455368101096	1271	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGTCTTCCTTGTCTTT	-42141450	True	NA	-3	True	AATATA	-23	NA	42154989	42124978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42125899_42126754_42126849_42128260_42128384_42128648_42128801_42130336_42130591_42154892
transcript_60091.known	chr17	+	549	1	FSM	ENSG00000260325.2	ENST00000565659.2	549	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGGTGTCCGTTGTCTT	42122793	False	NA	2	True	NA	NA	NA	42122803	42123352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42122800_42123400
transcript_60093.known	chr17	-	2408	10	FSM	ENSG00000167925.16	ENST00000587427.6	2408	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_6	2.49443825784929	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTGCCTCAGGGTCTGCT	-42193837	True	NA	0	True	AATAAA	-16	NA	42194494	42189086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42189922_42190184_42190271_42190623_42190758_42190831_42190904_42191017_42191211_42192240_42192743_42192905_42193028_42193316_42193595_42193766_42193851_42194392
transcript_60095.known	chr17	-	3319	24	FSM	ENSG00000168610.16	ENST00000585517.5	3319	24	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	144.080278504951	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAACTTCAGTTAACAGC	-42377170	True	NA	NA	False	NA	NA	NA	42388439	42314853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316852_42317181_42317225_42322281_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348521_42388278
transcript_60096.known	chr17	-	2633	24	FSM	ENSG00000168610.16	ENST00000404395.3	2633	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	116.750505477709	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGGTGATCTGCTTTTAT	-42377145	True	NA	-4	True	AATAGA	-13	NA	42388414	42315558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348518_42388278
transcript_60097.known	chr17	-	4890	24	FSM	ENSG00000168610.16	ENST00000679014.1	4890	24	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_3	103.265748168507	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTGAGGTTTTTTGTCT	-42377242	True	NA	-37	True	NA	NA	NA	42388511	42313420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42315801_42316788_42316902_42317181_42317225_42322284_42322495_42323003_42323144_42323259_42323355_42323572_42323626_42324710_42324847_42324962_42325062_42326115_42326200_42329409_42329458_42329553_42329648_42329746_42329777_42331471_42331532_42333672_42333766_42333890_42334050_42337434_42337587_42337762_42337858_42338730_42338813_42339313_42339410_42345558_42345658_42346568_42346714_42348388_42348540_42388278
transcript_60099.nic	chr17	-	767	4	ISM	ENSG00000168610.16	ENST00000678108.1	1927	14	-63	16463	0	0	5prime_fragment	FALSE	canonical	3	344	junction_3	138.571281295945	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAAAAAAAGAAAGTTCCA	-42377236	True	NA	NA	False	ATTAAA	-36	NA	42388505	42345413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_42345658_42346568_42346714_42348388_42348540_42388278
transcript_60100.known	chr17	-	3570	2	FSM	ENSG00000177469.13	ENST00000357037.6	3570	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTTTGATTGTATTCT	-42421633	True	NA	-1	True	AATAAA	-19	NA	42423256	42402448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42405389_42422626
transcript_60105.known	chr17	+	4110	21	FSM	ENSG00000033627.17	ENST00000264649.10	4110	21	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_5	45.7334669580166	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCTGTCACTGTGCCCA	42450806	True	NA	20	True	AATAAA	-24	NA	42458879	42522582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477638_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_60106.known	chr17	+	3028	21	FSM	ENSG00000033627.17	ENST00000393829.6	3028	21	0	0	0	0	multi-exon	TRUE	canonical	3	172	junction_5	29.8690475241512	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTAGACTTTGAGTTCCCT	42450770	True	NA	NA	False	NA	NA	NA	42458843	42521485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089_42470219_42477659_42477743_42478462_42478590_42480666_42480750_42483037_42483132_42487154_42487368_42490486_42490638_42494333_42494474_42495033_42495189_42495625_42495717_42498923_42499043_42500706_42500924_42501196_42501305_42507519_42507628_42513860_42513979_42514288_42514461_42521026
transcript_60109.known	chr17	+	1797	5	FSM	ENSG00000033627.17	ENST00000588629.1	1797	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	15.204851199535	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAGGTGACTTGGTTGGGC	42450784	True	NA	NA	False	NA	NA	NA	42458857	42471439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42458964_42460847_42461012_42466428_42466508_42468009_42468108_42470089
transcript_60118.known	chr17	+	1976	11	FSM	ENSG00000068120.15	ENST00000590958.5	1976	11	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	170.094561935413	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGCTCACCCTGGTT	42555785	True	NA	NA	False	NA	NA	NA	42562150	42566037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42562220_42562355_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_60119.nic	chr17	+	1840	10	NIC	ENSG00000068120.15	novel	2071	10	NA	NA	-63	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_1	146.542371574459	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42562034	False	NA	14	True	ATTAAA	-14	NA	42562070	42566274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42562220_42562932_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_60121.known	chr17	+	2071	10	FSM	ENSG00000068120.15	ENST00000421097.6	2071	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	136.185421891634	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTGAATGTTCTGAGATGT	42555781	True	NA	0	True	NA	NA	NA	42562146	42566260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42562220_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_60125.nic	chr17	+	2363	10	NIC	ENSG00000068120.15	novel	1976	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	91	junction_1	126.789803694886	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555771	True	NA	14	True	ATTAAA	-14	NA	42562136	42566274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42562488_42562611_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_60131.known	chr17	+	2479	9	FSM	ENSG00000068120.15	ENST00000393818.3	2479	9	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_2	36.8510515453766	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGCTTGTATGGTGTCTG	42555782	True	NA	17	True	ATTAAA	-17	NA	42562147	42566277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42563323_42563960_42564176_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_60138.nnic	chr17	+	1219	8	NIC	ENSG00000068120.15	novel	2071	10	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	168.543096892765	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555721	True	NA	14	True	ATTAAA	-14	NA	42562086	42566274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42562220_42564445_42564578_42564708_42564899_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_6014.nic	chr1	-	1833	11	ISM	ENSG00000058804.12	ENST00000371429.4	4552	18	-227	34866	-60	18626	5prime_fragment	FALSE	canonical	3	503	junction_2	35.5894647332606	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGATGACTGT	-53838496	False	NA	NA	False	NA	NA	NA	53838523	53800343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_53800849_53803927_53804010_53806424_53806518_53807655_53807792_53809694_53809747_53818970_53819080_53825797_53825937_53827998_53828174_53832489_53832592_53835499_53835621_53838204
transcript_60145.nnic	chr17	+	1029	7	NIC	ENSG00000068120.15	novel	2071	10	NA	NA	-47	0	combination_of_known_splicesites	FALSE	canonical	2	19	junction_1	222.810395229267	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGTTGCTTGTATGGTGT	42555721	True	NA	14	True	ATTAAA	-14	NA	42562086	42566274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42562220_42564445_42564578_42564982_42565048_42565226_42565312_42565470_42565569_42565658_42565806_42565905
transcript_60157.known	chr17	+	2475	6	FSM	ENSG00000108784.10	ENST00000225927.7	2475	6	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	17.8594512793647	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGATGAGTCCCCTGGGTCT	42534578	True	NA	23	True	ATTAAA	-24	NA	42536240	42544449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42536656_42537397_42537546_42538338_42538486_42538669_42538756_42540949_42541207_42543027
transcript_60162.nnic	chr17	+	533	2	NNC	ENSG00000068120.15	novel	1976	11	NA	NA	-34	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGCTTGTATGGTGTC	42555734	True	NA	15	True	ATTAAA	-15	NA	42562099	42566275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_42562290_42565932
transcript_60164.known	chr17	-	2313	1	FSM	ENSG00000266962.2	ENST00000590513.2	2313	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	177	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTCCTGTCCTCTTTTC	-42552235	True	NA	-1	True	AAAACA	-18	NA	42554748	42552435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42552400_42554700
transcript_6017.nic	chr1	-	1903	12	NIC	ENSG00000058799.15	novel	1602	11	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	87	junction_2	101.334565745732	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887621	True	NA	-18	True	AATAAA	-27	NA	53889814	53851718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_60171.known	chr17	+	2360	8	FSM	ENSG00000108788.12	ENST00000435881.7	2360	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	158.690817346827	732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTGGGCACTGCCTGTCA	42562599	True	NA	10	True	AATAAA	-23	NA	42567099	42573203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567167_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_60178.known	chr17	+	2586	8	FSM	ENSG00000108788.12	ENST00000246912.8	2586	8	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	88.3462575579169	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567329_42567618_42567656_42568469_42568560_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_60189.known	chr17	+	2334	7	FSM	ENSG00000108788.12	ENST00000346833.8	2334	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	204.844181974712	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569304_42569506_42569607_42569981_42570184_42571546
transcript_60203.known	chr17	-	1381	7	FSM	ENSG00000131470.15	ENST00000587209.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_4	43.1380213835647	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTATTTAGAAAAATAAAAAA	-42572189	True	NA	-34	True	NA	NA	NA	42577697	42572342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460
transcript_60205.known	chr17	-	664	7	FSM	ENSG00000131470.15	ENST00000590760.5	664	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_4	124.176845220391	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGGTCAGGACTGGTGGGG	-42572188	True	NA	NA	False	NA	NA	NA	42577696	42572961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574195_42574211_42577212_42577303_42577460
transcript_6021.known	chr1	-	1602	11	FSM	ENSG00000058799.15	ENST00000464950.6	1602	11	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	85.1964788004763	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGACTTTGACCTCAA	-53887540	True	NA	-18	True	AATAAA	-27	NA	53889733	53851718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53852271_53855000_53855052_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_60215.known	chr17	+	2537	6	FSM	ENSG00000108788.12	ENST00000590050.5	2537	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	216.973178065861	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCGGCTGATCTGGTGCCTG	42567060	False	NA	46	True	NA	NA	NA	42567071	42573239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42567167_42567618_42567656_42568836_42568944_42569203_42569607_42569981_42570184_42571546
transcript_60226.known	chr17	+	542	1	FSM	ENSG00000287710.1	ENST00000655617.1	542	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	165	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGGTGGCGCGCTTCTGT	42577683	True	NA	6	True	AATAAA	-15	NA	42577824	42578366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42577800_42578400
transcript_60227.known	chr17	-	1355	8	FSM	ENSG00000131470.15	ENST00000393795.8	1355	8	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_7	67.1686880403453	1525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGTGTTATACCTGCCT	-42572221	True	NA	-1	True	AATAAA	-17	NA	42577729	42572309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42577212_42577303_42577460_42577562_42577652
transcript_60228.known	chr17	-	747	9	FSM	ENSG00000131470.15	ENST00000586337.5	747	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	170.122015036267	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGGTTGGCTTTTGTTG	-42572180	True	NA	NA	False	NA	NA	NA	42577688	42572895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42573025_42573106_42573167_42573310_42573365_42573477_42573624_42574098_42574211_42574315_42574335_42577212_42577303_42577460_42577562_42577652
transcript_60229.known	chr17	-	3749	9	FSM	ENSG00000141699.11	ENST00000309428.10	3749	9	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_6	17.4839211849059	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAAGAGACTGATGCTG	-42604951	True	NA	-10	True	AATAAA	-17	NA	42609374	42579514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42587833_42587865_42592055_42592163_42609085
transcript_60230.known	chr17	-	1632	8	FSM	ENSG00000141699.11	ENST00000586870.5	1632	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	60.3618341372109	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACTGAAGTGAGAGTGTG	-42604963	True	NA	NA	False	NA	NA	NA	42609386	42581612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42582271_42582673_42582807_42583497_42583581_42585124_42585263_42586052_42586138_42586764_42586892_42592055_42592163_42609085
transcript_60231.known	chr17	+	1608	11	FSM	ENSG00000131462.9	ENST00000251413.8	1608	11	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	94.0370139891734	2771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGCTCCCTTTAAAGC	42592261	True	NA	13	True	AATAAA	-19	NA	42609682	42615238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_60232.known	chr17	+	1980	9	FSM	ENSG00000131462.9	ENST00000681490.1	1980	9	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_7	75.093275331417	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592219	True	NA	-1	True	AATAAA	-5	NA	42609640	42615224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_60233.known	chr17	+	1899	10	FSM	ENSG00000131462.9	ENST00000680678.1	1899	10	0	0	0	0	multi-exon	TRUE	canonical	3	1632	junction_7	77.5241897732572	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	42592219	True	NA	1	True	AATAAA	-7	NA	42609640	42615226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614413_42614495_42614658_42614843
transcript_60234.known	chr17	+	2233	8	FSM	ENSG00000131462.9	ENST00000588056.2	2233	8	0	0	0	0	multi-exon	FALSE	canonical	3	1632	junction_6	77.9500101451735	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592249	True	NA	-1	True	AATAAA	-5	NA	42609670	42615224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612507_42612946_42613074_42613646_42613734_42613848_42614658_42614843
transcript_60235.known	chr17	+	1719	10	FSM	ENSG00000131462.9	ENST00000681947.1	1719	10	0	0	0	0	multi-exon	FALSE	canonical	3	1572	junction_8	96.0417861733008	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATATAAATCAAGTCACT	42592219	True	NA	-1	True	AATAAA	-5	NA	42609640	42615224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614658_42614843
transcript_60236.known	chr17	+	1776	11	FSM	ENSG00000131462.9	ENST00000681413.1	1776	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	535.276601394083	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATATAAATCAAGTCACTGC	42592219	True	NA	1	True	AATAAA	-7	NA	42609640	42615226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612426_42612507_42612946_42613074_42613646_42613734_42613848_42614137_42614259_42614413_42614495_42614658_42614843
transcript_60237.known	chr17	+	1509	10	FSM	ENSG00000131462.9	ENST00000589688.2	1509	10	0	0	0	0	multi-exon	FALSE	canonical	1	72	junction_4	531.693311767016	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATATAAATCAAGTCACTG	42592267	True	NA	0	True	AATAAA	-6	NA	42609688	42615225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42609787_42610107_42610221_42610422_42610591_42612074_42612144_42612946_42613074_42613646_42613734_42613848_42613999_42614259_42614413_42614495_42614658_42614843
transcript_6024.known	chr1	-	1821	11	FSM	ENSG00000058799.15	ENST00000072644.7	1821	11	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_10	84.8070751765441	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-53887604	True	NA	-32	True	AATAAA	-13	NA	53889797	53851732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889243_53889464_53889712
transcript_60241.known	chr17	+	1782	11	FSM	ENSG00000037042.9	ENST00000251412.8	1782	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	157.989113549004	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656197	True	NA	14	True	AATAAA	-26	NA	42659283	42667006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42662972_42663053_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_60244.nic	chr17	+	1722	10	NIC	ENSG00000037042.9	novel	1782	11	NA	NA	-20	0	combination_of_known_junctions	TRUE	canonical	3	32	junction_4	155.23920212544	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGCTTGATCTGTGAA	42656177	True	NA	14	True	AATAAA	-26	NA	42659263	42667006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42659553_42659833_42659947_42660148_42660317_42660638_42660708_42663376_42663504_42665475_42665563_42665677_42665828_42666086_42666240_42666322_42666485_42666602
transcript_60249.nnic	chr17	-	763	3	NIC	ENSG00000068137.15	novel	2640	13	NA	NA	-1055	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	91.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTCCTGTGGGAGTGTTA	-42670678	False	451	44	True	AAAAAG	-18	NA	42670753	42667913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42668304_42669429_42669622_42670572
transcript_60250.nnic	chr17	+	503	2	NIC	ENSG00000267042.1	novel	542	3	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGGAAGGAAAG	42679912	False	NA	NA	False	NA	NA	NA	42679926	42682020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42680402_42681992
transcript_60251.nnic	chr17	+	566	2	NIC	ENSG00000267042.1	novel	542	3	NA	NA	-36	63	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAATGAACGAAAG	42679912	False	NA	NA	False	AAAAAG	-13	NA	42679926	42682083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_42680402_42681992
transcript_60252.known	chr17	+	542	3	FSM	ENSG00000267042.1	ENST00000593139.1	542	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAGAAAGGAAGGAAAG	42679944	True	NA	NA	False	NA	NA	NA	42679962	42682020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42680402_42681363_42681439_42681992
transcript_60253.known	chr17	-	4633	21	FSM	ENSG00000108799.13	ENST00000428826.7	4633	21	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_20	9.15478017212866	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAAGTTGTGTACTG	-42743459	True	NA	-7	True	AATAAA	-14	NA	42745040	42700274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42702593_42702876_42702962_42703739_42703821_42704601_42704684_42705087_42705184_42706006_42706186_42707957_42708084_42708875_42708917_42709845_42709938_42712288_42712486_42713208_42713390_42717975_42718068_42718453_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_60256.nic	chr17	-	1541	9	NIC	ENSG00000108799.13	novel	2752	19	NA	NA	-21	0	intron_retention	FALSE	canonical	3	21	junction_8	11.2333209693305	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTGGCACAGACTGCTT	-42743489	True	NA	2	True	AATAAA	-22	NA	42745070	42718005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_42718618_42719104_42719208_42720272_42720450_42722794_42722916_42724304_42724425_42727634_42727764_42728824_42728953_42730827_42730919_42745010
transcript_60265.nic	chr17	-	785	4	ISM	ENSG00000108799.13	ENST00000590082.1	565	5	-33	2833	-21	-2833	5prime_fragment	FALSE	canonical	3	21	junction_3	16.2138486760204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGGAAATAAATA	-42743489	True	NA	NA	False	AAAAAG	-6	NA	42745070	42727257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_42727764_42728824_42728953_42730827_42730919_42745010
transcript_60267.known	chr17	-	594	2	FSM	ENSG00000108799.13	ENST00000586714.1	594	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTCTGGCCTCAGAAGAA	NA	False	NA	NA	False	NA	NA	NA	42703169	42702291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42702593_42702876
transcript_60268.known	chr17	+	858	4	FSM	ENSG00000131477.11	ENST00000589683.5	858	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	56.6647058484282	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42760763	False	NA	8	True	AATAAA	-18	NA	42760774	42763041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761013_42761833_42761900_42762354_42762464_42762596
transcript_60270.known	chr17	+	548	4	FSM	ENSG00000131477.11	ENST00000588928.1	548	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	66.9842435867487	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCACTTTGCCAACTGCT	42760618	False	NA	NA	False	NA	NA	NA	42760804	42762698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761076_42761833_42761900_42762354_42762464_42762596
transcript_60272.known	chr17	+	752	4	FSM	ENSG00000131477.11	ENST00000253796.10	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_1	21.4009345590327	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCTCCCCATTTCAG	42761179	False	NA	8	True	AATAAA	-18	NA	42761226	42763041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761359_42761833_42761900_42762354_42762464_42762596
transcript_60278.known	chr17	+	573	3	FSM	ENSG00000131477.11	ENST00000588576.1	573	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	49.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCTGTAATCTTCAAAATA	42761210	False	NA	-31	True	NA	NA	NA	42761257	42763002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42761359_42761833_42761900_42762596
transcript_60281.known	chr17	+	1088	6	FSM	ENSG00000131475.7	ENST00000253794.7	1088	6	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_4	61.4576276795647	8869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGCCTCTTAAATTAC	42763844	True	NA	13	True	ATTAAA	-14	NA	42773448	42779599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42773529_42773732_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_60282.known	chr17	+	668	5	FSM	ENSG00000131475.7	ENST00000590339.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	1167	junction_3	59.5246797555434	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCAGGAGCACAAGGCCGA	42763875	True	NA	NA	False	NA	NA	NA	42773479	42779006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42773879_42774645_42774700_42775380_42775470_42776244_42776321_42778956
transcript_60283.known	chr17	-	780	2	FSM	ENSG00000183978.8	ENST00000328434.8	780	2	0	0	0	0	multi-exon	FALSE	canonical	3	1431	junction_1	0	5620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGGAGGCTGAGAGGCAG	-42785819	True	NA	1	True	AATAAA	-28	NA	42798704	42797624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42798168_42798467
transcript_60284.known	chr17	+	3182	11	FSM	ENSG00000131467.12	ENST00000590720.6	3182	11	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_6	98.3850090206836	740	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGCCTTCTGGTTTCCAAT	42814134	True	NA	12	True	AATAAA	-25	NA	42833396	42843760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838092_42838206_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_6029.nic	chr1	-	1652	10	NIC	ENSG00000058799.15	novel	1821	11	NA	NA	-50	0	combination_of_known_junctions	FALSE	canonical	3	201	junction_1	42.0399574772782	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	NA	False	NA	-32	True	AATAAA	-13	NA	53889848	53851732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53888906_53888987_53889712
transcript_60291.known	chr17	-	2109	12	FSM	ENSG00000126581.13	ENST00000590099.6	2109	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	147.637931026163	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-42817841	True	NA	-13	True	AATAAA	-25	NA	42824282	42810133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824154
transcript_60292.known	chr17	-	2112	12	FSM	ENSG00000126581.13	ENST00000361523.8	2112	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	152.474791304894	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGGGTGCACTGTTGGG	-42817822	True	NA	-13	True	AATAAA	-25	NA	42824263	42810133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42818878_42819547_42819610_42820773_42820842_42823747_42823880_42824132
transcript_60293.known	chr17	-	2504	11	FSM	ENSG00000126581.13	ENST00000543382.6	2504	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	154.312831611632	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTGCACTTAACAATATGAA	-42817846	True	NA	NA	False	NA	NA	NA	42824287	42810413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42810929_42811654_42811798_42813947_42814009_42814523_42814674_42815907_42816055_42818220_42818416_42818543_42818681_42818786_42819610_42820773_42820842_42823747_42823880_42824154
transcript_60294.known	chr17	+	956	10	FSM	ENSG00000131467.12	ENST00000543428.5	956	10	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	469.890294525104	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAGTTAGAGTCTAATG	42814182	True	NA	-14	True	NA	NA	NA	42833444	42841695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42833674_42834343_42834377_42834514_42834578_42834771_42834877_42837648_42837698_42838730_42838800_42838944_42839013_42839111_42839167_42839293_42839381_42841497
transcript_60295.known	chr17	+	2572	4	FSM	ENSG00000131480.9	ENST00000452774.2	2572	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	35.8267435801184	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTACTTGAATTTATT	42844589	False	NA	1	True	AATAAA	-12	NA	42844600	42850704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42846215_42849085_42849291_42849600_42849731_42850081
transcript_60296.known	chr17	+	2677	4	FSM	ENSG00000131480.9	ENST00000253799.8	2677	4	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_1	32.8667342798493	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTGAATTTATTGTT	42844568	False	NA	4	True	AATAAA	-15	NA	42844579	42850707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42846215_42849085_42849372_42849600_42849731_42850081
transcript_60298.known	chr17	-	1790	17	FSM	ENSG00000108825.18	ENST00000360221.8	1790	17	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	153.156323326855	766	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42979817	True	NA	-12	True	AATAAA	-17	NA	42980003	42950525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42979904
transcript_60316.known	chr17	-	1781	6	FSM	ENSG00000267060.7	ENST00000409446.8	1781	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	11.5412304370028	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTTGCTCTTGAACTCA	-42980407	False	NA	-14	True	AATAAA	-13	NA	42980433	42968103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42980045
transcript_60317.known	chr17	-	1320	12	FSM	ENSG00000266967.7	ENST00000427569.7	1320	12	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_11	34.5739117240272	1649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42960876	True	NA	-12	True	AATAAA	-17	NA	42964454	42950525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42953723_42953779_42954875_42954968_42955157_42955225_42955841_42955973_42956203_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_60318.known	chr17	-	1543	7	FSM	ENSG00000267060.7	ENST00000591916.7	1543	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	7.08088192874933	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTTGCTCTTGAACTCAT	-42979894	True	NA	-13	True	AATAAA	-14	NA	42980080	42968102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42969187_42970288_42970343_42971606_42971697_42979169_42979269_42979377_42979445_42979549_42979664_42980045
transcript_60319.known	chr17	-	457	3	FSM	ENSG00000266967.7	ENST00000592136.5	457	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	155.5	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGCGCTACCACTTGTA	-42951456	False	NA	-12	True	AATAAA	-17	NA	42955034	42950525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42950729_42951799_42951895_42954875
transcript_60320.known	chr17	-	983	6	FSM	ENSG00000266967.7	ENST00000441280.7	983	6	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_5	30.482782025268	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGAGAAGTCATGGAACTG	-42960865	True	NA	NA	False	NA	NA	NA	42964443	42955886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_42956321_42956403_42956561_42957137_42957196_42961191_42961352_42964105_42964238_42964401
transcript_60321.known	chr17	+	3828	5	FSM	ENSG00000198863.8	ENST00000361677.6	5280	5	0	1452	0	-1452	multi-exon	FALSE	canonical	3	76	junction_4	7.82224392358101	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTATCCTCTGTCCTCTG	42978362	True	NA	29	True	NA	NA	NA	42980564	42993690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42981075_42987255_42987415_42989340_42989540_42990316_42990437_42990850
transcript_60324.known	chr17	+	585	5	FSM	ENSG00000131469.15	ENST00000589037.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	5455.2643382333	4704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAAAAGCCTGTGTCT	42998198	True	NA	53	True	ATTAAA	-8	NA	42998272	43002949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998416_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_6034.known	chr1	-	1503	9	FSM	ENSG00000058799.15	ENST00000371399.5	1503	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	103.209662217256	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGTGTCTGCATTTTGT	-53887586	True	NA	-32	True	AATAAA	-13	NA	53889779	53851732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53852271_53860055_53860154_53866199_53866383_53866757_53866925_53871371_53871489_53878314_53878403_53878641_53878723_53883112_53883277_53889712
transcript_60340.known	chr17	+	730	4	FSM	ENSG00000131469.15	ENST00000589913.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	10738	junction_3	1362.85680343412	97157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913342	True	NA	63	True	ATTAAA	-18	NA	42998470	43002959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998832_42999932_43000103_43002672_43002784_43002871
transcript_60341.known	chr17	+	505	5	FSM	ENSG00000131469.15	ENST00000253788.12	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	7329	junction_1	2490.62265056351	234466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913290	True	NA	63	True	ATTAAA	-18	NA	42998418	43002959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998472_42998748_42998832_42999932_43000103_43002672_43002784_43002871
transcript_60342.known	chr17	+	318	4	FSM	ENSG00000131469.15	ENST00000588830.1	318	4	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_2	4315.96990515715	4374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTCTGCATGCTGTA	42913307	True	NA	63	True	ATTAAA	-18	NA	42998435	43002959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_42998472_42998748_42998832_43002672_43002784_43002871
transcript_60343.known	chr17	+	1872	3	FSM	ENSG00000131469.15	ENST00000593262.1	1872	3	0	0	0	0	multi-exon	FALSE	canonical	3	10738	junction_2	1669	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAAAAAGCCTGTGTC	42913290	True	NA	52	True	ATTAAA	-7	NA	42998418	43002948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43000103_43002672_43002784_43002871
transcript_60347.known	chr17	+	1182	7	FSM	ENSG00000068079.8	ENST00000415816.7	1182	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	5.01386965216377	89	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTTCTTCCTCATTTCA	43006652	False	NA	5	True	AGTAAA	-17	NA	43006783	43014456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43006969_43012178_43012278_43013046_43013195_43013266_43013374_43013475_43013663_43013775_43013883_43014107
transcript_60349.known	chr17	-	2699	6	FSM	ENSG00000108828.16	ENST00000355653.8	2699	6	0	0	0	0	multi-exon	TRUE	canonical	3	1291	junction_5	72.9421688737043	592	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCCTGCTTGTTGCCTCTG	-43010759	True	NA	-20	True	AATAAA	-14	NA	43022385	43014606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43016145_43016306_43016549_43017840_43017931_43018035_43018207_43018591_43018800_43021935
transcript_60353.nnic	chr17	+	952	6	NNC	ENSG00000108830.10	novel	4162	5	NA	NA	-16	-2813	at_least_one_novel_splicesite	TRUE	canonical	3	70	junction_5	272.715676117087	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGTGGCTTTAGTTTTG	43020591	True	NA	27	True	AATAAA	-19	NA	43025214	43029228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431_43028677_43029089
transcript_60366.known	chr17	+	4162	5	FSM	ENSG00000108830.10	ENST00000587250.4	4162	5	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_1	102.637712367336	1204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTGCCAGAGTTTCTGTG	43020607	True	NA	12	True	AATAAA	-19	NA	43025230	43032041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43025450_43025959_43026048_43027182_43027293_43028060_43028196_43028431
transcript_60379.known	chr17	-	7270	24	FSM	ENSG00000012048.23	ENST00000471181.7	7270	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_12	27.2376643486229	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGAATGACTGTTCTTGA	-43125408	True	NA	-5	True	AATAAA	-21	NA	43125483	43044294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43045803_43047642_43047704_43049120_43049195_43051062_43051118_43057051_43057136_43063332_43063374_43063873_43063952_43067607_43067696_43070927_43071239_43074330_43074522_43076487_43076612_43079333_43079400_43082403_43082576_43090943_43091033_43091434_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_60382.known	chr17	-	4497	10	FSM	ENSG00000012048.23	ENST00000354071.7	4497	10	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_9	16.4166431659918	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACACAGCAAGTTGCAGCGT	-43125240	False	NA	NA	False	AGTAAA	-27	NA	43125315	43091097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125270
transcript_60383.known	chr17	-	1612	10	FSM	ENSG00000012048.23	ENST00000494123.5	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	16.629588385662	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGCCATGTAACTGAAAA	-43125375	False	NA	NA	False	NA	NA	NA	43125450	43094111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125276
transcript_60388.nic	chr17	-	998	6	NIC	ENSG00000012048.23	novel	558	7	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_5	25.2459897805572	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCCTGAACATCTAAAAG	-43122658	True	NA	NA	False	AAAAAG	-9	NA	43125377	43104224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43124736
transcript_60400.nnic	chr17	-	670	2	NIC	ENSG00000267002.4	novel	1782	4	NA	NA	26	2	combination_of_known_splicesites	FALSE	canonical	2	2	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-43170311	False	NA	1	True	ATTAAA	-20	NA	43170377	43148365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43148784_43170125
transcript_60401.known	chr17	-	558	7	FSM	ENSG00000012048.23	ENST00000644555.1	558	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	32.405846523257	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCTCCTGAACATCTAAAAG	-43122607	True	NA	NA	False	AAAAAG	-9	NA	43125326	43104224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43119120_43119266_43124016_43124116_43125270
transcript_60402.known	chr17	-	2108	10	FSM	ENSG00000012048.23	ENST00000470026.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_9	22.7303028283098	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ATAAAGAAAAAAAAGTACAA	-43122604	True	NA	NA	False	NA	NA	NA	43125323	43093583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43094861_43095845_43095923_43097243_43097290_43099774_43099881_43104121_43104262_43104867_43104957_43106455_43106534_43115725_43115780_43124016_43124116_43125181
transcript_60404.known	chr17	+	4613	21	FSM	ENSG00000188554.15	ENST00000590996.6	4613	21	0	0	0	0	multi-exon	TRUE	canonical	3	139	junction_11	20.9666401695646	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGGACTGGCTAGTCCTTG	43167003	True	NA	15	True	AATAAA	-19	NA	43171213	43211688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166_43200609_43201685_43201781_43202654_43202713_43203680_43203787_43209900
transcript_60407.nic	chr17	+	2754	17	ISM	ENSG00000188554.15	ENST00000589872.1	3097	21	-59	9091	-18	4646	5prime_fragment	FALSE	canonical	3	139	junction_11	23.4053112295052	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATTCTGGATTTAA	43166973	True	NA	5	True	AATAAA	-18	NA	43171183	43200766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43171303_43175790_43175902_43177935_43177999_43179393_43179413_43180794_43180818_43186249_43186445_43189041_43189120_43189587_43189803_43190608_43190777_43191371_43191582_43193093_43193254_43193347_43193639_43194349_43194500_43194963_43195040_43196480_43196592_43196941_43197107_43200166
transcript_60414.nnic	chr17	+	921	5	NNC	ENSG00000198496.12	novel	1344	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	10.8742815854658	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	43124704	True	NA	-13	True	NA	NA	NA	43125573	43153649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43139936_43140284_43153601
transcript_60415.nnic	chr17	+	693	5	NNC	ENSG00000198496.12	novel	1344	5	NA	NA	23	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	9.83298021964857	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	43124704	True	NA	-13	True	NA	NA	NA	43125573	43153649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43140164_43140284_43153601
transcript_60423.nnic	chr17	+	643	4	NNC	ENSG00000198496.12	novel	1895	3	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.63299316185545	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAAGATCCTCCTCAATCC	43124691	True	NA	-13	True	NA	NA	NA	43125560	43153649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43138656_43138923_43140164_43140284_43153601
transcript_60424.known	chr17	+	978	4	FSM	ENSG00000198496.12	ENST00000356906.7	978	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	10.4243305140746	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	43124770	True	NA	13	True	AATAAA	-22	NA	43125639	43140333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43125771_43131207_43131271_43138656_43138923_43139815
transcript_60425.nnic	chr17	+	920	4	NNC	ENSG00000198496.12	novel	978	4	NA	NA	23	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	11.5181016954473	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTCCTGGGTTTTGTG	43124704	True	NA	10	True	AATAAA	-19	NA	43125573	43140330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_43125771_43131207_43131271_43138656_43138923_43139936
transcript_60432.nic	chr17	+	994	3	NIC	ENSG00000198496.12	novel	978	4	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCCTGGGTTTTGTGAGC	43124691	True	NA	13	True	AATAAA	-22	NA	43125560	43140333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_43125771_43138656_43138923_43139815
transcript_60436.nic	chr17	+	1934	3	ISM	ENSG00000198496.12	ENST00000356906.7	978	4	-66	3	23	-3	intron_retention	FALSE	canonical	3	11	junction_2	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATTTTCCTGGGTTTTGTG	43124704	True	NA	10	True	AATAAA	-19	NA	43125573	43140330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43125771_43131207_43131271_43138656
transcript_60440.nnic	chr17	-	906	3	NIC	ENSG00000267002.4	novel	1782	4	NA	NA	-14	2	combination_of_known_splicesites	TRUE	canonical	1	3	junction_1	1	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-43170264	False	NA	1	True	ATTAAA	-20	NA	43170330	43148365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43148784_43166979_43167263_43170125
transcript_60441.nic	chr17	+	257	2	ISM	ENSG00000198496.12	ENST00000356906.7	978	4	-66	9066	23	-9066	5prime_fragment	FALSE	canonical	3	28	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTAAAGTATATTATGGT	43124704	True	NA	NA	False	AATAAA	-23	NA	43125573	43131267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43125771_43131207
transcript_60442.known	chr17	+	964	2	FSM	ENSG00000188554.15	ENST00000592304.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTGGATTCAGAAAGAAGT	43167014	True	NA	NA	False	NA	NA	NA	43171224	43176676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43171303_43175790
transcript_60443.known	chr17	-	2406	2	FSM	ENSG00000267002.4	ENST00000634503.1	2406	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAATGGTTATCATCTTCGA	-43170375	False	NA	NA	False	AAAAAG	-15	NA	43170441	43165759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43167850_43170125
transcript_60450.known	chr17	-	191	1	FSM	ENSG00000275616.1	ENST00000616345.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-43240087	False	NA	NA	False	NA	NA	NA	43240111	43239920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43239900_43240100
transcript_60451.known	chr17	-	191	1	FSM	ENSG00000274585.1	ENST00000618664.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-43233942	False	NA	NA	False	NA	NA	NA	43233977	43233786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43233800_43234000
transcript_60452.known	chr17	-	191	1	FSM	ENSG00000273709.1	ENST00000616535.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-43241346	False	NA	NA	False	NA	NA	NA	43241370	43241179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43241200_43241400
transcript_60453.known	chr17	-	191	1	FSM	ENSG00000274432.1	ENST00000619465.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-43245814	False	NA	NA	False	NA	NA	NA	43245864	43245673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43245700_43245900
transcript_60454.known	chr17	-	191	1	FSM	ENSG00000278048.1	ENST00000613119.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43252019	43251828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43251800_43252000
transcript_60455.known	chr17	-	192	1	FSM	ENSG00000278774.1	ENST00000613956.1	192	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43273292	43273100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43273100_43273300
transcript_60456.known	chr17	-	191	1	FSM	ENSG00000274862.1	ENST00000615427.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	-43278157	False	NA	NA	False	NA	NA	NA	43278168	43277977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43278000_43278200
transcript_60457.known	chr17	-	191	1	FSM	ENSG00000274062.1	ENST00000617785.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43284329	43284138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43284100_43284300
transcript_60458.known	chr17	-	191	1	FSM	ENSG00000275219.1	ENST00000620268.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43296615	43296424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43296400_43296600
transcript_60459.known	chr17	-	191	1	FSM	ENSG00000278591.1	ENST00000618602.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43300231	43300040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43300000_43300200
transcript_6046.known	chr1	-	894	6	FSM	ENSG00000081870.12	ENST00000371378.6	894	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	254.452667504194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTTTGCCAAGTTT	-53941085	True	NA	NA	False	AATAAA	-15	NA	53945572	53916573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53917117_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_60460.known	chr17	-	191	1	FSM	ENSG00000276596.1	ENST00000613778.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43266823	43266632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43266600_43266800
transcript_60461.known	chr17	-	191	1	FSM	ENSG00000277903.1	ENST00000611544.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43271559	43271368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43271400_43271600
transcript_60462.known	chr17	-	191	1	FSM	ENSG00000274452.1	ENST00000619225.1	191	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGGGGATACAACGTGTTTC	NA	False	NA	NA	False	NA	NA	NA	43290481	43290290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43290300_43290500
transcript_60463.known	chr17	-	1083	5	FSM	ENSG00000188825.15	ENST00000658754.1	1083	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.54950975679639	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTATAGTTACCATCTCAT	NA	False	NA	NA	False	AATAAA	-27	NA	43388350	43371076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43371427_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_60464.known	chr17	-	874	5	FSM	ENSG00000188825.15	ENST00000656704.1	874	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.8613807855649	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCTGCGTGAATTACTC	-43388224	True	NA	NA	False	AATAAA	-21	NA	43388314	43375929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43376107_43377670_43377814_43379122_43379263_43381272_43381661_43388288
transcript_60469.nnic	chr17	-	1119	3	Fusion	ENSG00000279602.1_ENSG00000188825.15	novel	1186	3	NA	NA	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.5	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTAAGCTGTCTCTCCT	-43360863	True	NA	NA	False	ATTAAA	-23	NA	43361361	43338740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr17_-_43339505_43341177_43341460_43361288
transcript_60472.known	chr17	-	1321	1	FSM	ENSG00000279602.1	ENST00000624705.1	1321	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCGCGGACTTGCCCTGAGT	-43360863	True	NA	NA	False	AATAAA	-17	NA	43361361	43360040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43360000_43361400
transcript_60473.known	chr17	+	1578	2	FSM	ENSG00000175906.5	ENST00000320033.5	1578	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	203	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGATCTCTGTAGTTTT	43398403	True	NA	4	True	NA	NA	NA	43398992	43401137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43399094_43399660
transcript_60474.known	chr17	+	5549	23	FSM	ENSG00000067596.12	ENST00000262415.8	5549	23	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_5	19.5824174804891	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCTAGGCTGGCATCA	43479187	True	NA	NA	False	NA	NA	NA	43483974	43525670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43523627
transcript_60475.known	chr17	+	3809	23	FSM	ENSG00000067596.12	ENST00000540306.5	3809	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_22	42.3445138269371	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACCTGTTTTTAAAATTT	43479175	True	NA	9	True	ATTAAA	-13	NA	43483962	43526786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164_43491251_43492182_43492293_43492680_43493041_43493444_43493590_43493682_43493887_43496180_43496269_43498861_43498960_43499955_43500104_43504643_43504826_43507002_43507198_43507502_43507689_43507808_43508020_43508338_43508521_43513361_43513503_43517166_43517323_43520129_43520268_43520750_43520880_43521368_43521566_43522046_43522227_43526495
transcript_60476.nic	chr17	+	450	4	ISM	ENSG00000067596.12	ENST00000262415.8	5549	23	-46	34472	-31	705	5prime_fragment	FALSE	canonical	3	179	junction_2	7.25718035235908	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAAGGAACTCTTCCCAG	NA	False	NA	NA	False	AAAAAG	-5	NA	43483928	43491198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_43484186_43489448_43489535_43490390_43490464_43491164
transcript_60478.known	chr17	+	235	3	FSM	ENSG00000067596.12	ENST00000605777.1	235	3	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_2	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGAATGGTGTAGGTTTTG	43479352	False	NA	NA	False	NA	NA	NA	43484139	43490493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43484186_43489448_43489535_43490390
transcript_60481.known	chr17	-	1727	13	FSM	ENSG00000175832.13	ENST00000591713.5	1727	13	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_12	309.745986881007	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAATGGCAAGTCTAGA	-43545863	False	NA	NA	False	NA	NA	NA	43545899	43528336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557_43545669_43545860
transcript_60482.known	chr17	-	1775	12	FSM	ENSG00000175832.13	ENST00000545954.5	1775	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_11	318.747912000939	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTCAGCTCAGCTTCT	-43540449	True	NA	NA	False	NA	NA	NA	43546323	43528277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43546184
transcript_60485.nic	chr17	-	2497	11	ISM	ENSG00000175832.13	ENST00000393664.6	2182	12	-123	-2	-81	0	intron_retention	TRUE	canonical	3	1007	junction_6	101.525563283343	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTCCTGTGTCCTCTTT	-43545758	False	NA	-4	True	AATAAA	-20	NA	43545794	43527843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273
transcript_60497.known	chr17	-	2182	12	FSM	ENSG00000175832.13	ENST00000393664.6	2182	12	0	0	0	0	multi-exon	FALSE	canonical	3	746	junction_11	143.905961029537	729	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGTTCTCCTGTGTCCTCT	-43545635	False	NA	-6	True	AATAAA	-18	NA	43545671	43527845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43528744_43529134_43529237_43529503_43529677_43529883_43529953_43530106_43530182_43532673_43532940_43533186_43533349_43533858_43533986_43536425_43536480_43544974_43545023_43545273_43545368_43545557
transcript_60498.nic	chr17	-	1301	4	NIC	ENSG00000108861.9	novel	1019	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	71.4438396380137	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAAAGGTATTGTTTTTTT	-43775078	True	NA	NA	False	AATAAA	-11	NA	43778986	43766130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_60499.nic	chr17	-	936	4	NIC	ENSG00000108861.9	novel	2077	4	NA	NA	-9	16	combination_of_known_junctions	FALSE	canonical	2	30	junction_1	71.4438396380137	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTGATCTTCAATATGAA	-43775078	True	NA	NA	False	TTTAAA	-19	NA	43778986	43766495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43766785_43769581_43769815_43774711_43774939_43778799
transcript_605.known	SIRV6	+	454	3	FSM	SIRV6A	SIRV611	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	3029	junction_1	14741	14596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGGTGTTTATAGTTTA	NA	False	NA	NA	False	NA	NA	NA	1303	1950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1382_1468_1535_1640
transcript_60500.nic	chr17	-	879	3	NIC	ENSG00000108861.9	novel	3666	3	NA	NA	-9	1237	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	96	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCCTCACATCTCATTGG	-43775078	True	NA	NA	False	AGTAAA	-15	NA	43778986	43773644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_43774110_43774711_43774939_43778799
transcript_60501.known	chr17	-	4095	3	FSM	ENSG00000108861.9	ENST00000226004.8	4095	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	16	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTATTGTTTTTTTGTCCTT	-43775069	True	NA	NA	False	AATAAA	-17	NA	43778977	43766124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43769815_43774711_43774939_43778799
transcript_60504.known	chr17	-	2186	19	FSM	ENSG00000161647.19	ENST00000496503.5	2186	19	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_9	7.29197089312436	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGTAGCCACTGTCTTT	-43832625	True	NA	3	True	ATTAAA	-39	NA	43833170	43801417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_60508.known	chr17	-	2790	20	FSM	ENSG00000161647.19	ENST00000398389.9	2790	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	10.9802138846613	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGCCTAATGGGTTGT	-43832601	True	NA	NA	False	AATAAA	-17	NA	43833146	43800810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43801878_43808955_43809079_43810806_43810916_43811111_43811206_43814010_43814092_43814196_43814362_43816037_43816080_43816676_43816698_43818045_43818111_43820861_43821059_43823930_43824006_43825755_43825842_43827750_43827833_43829653_43829792_43830026_43830108_43831243_43831322_43831558_43831678_43831881_43831944_43832760_43832820_43833100
transcript_60509.known	chr17	+	1459	2	FSM	ENSG00000161649.13	ENST00000588884.1	1459	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGCATCGAACCACATTGA	NA	False	NA	NA	False	AATAAA	-21	NA	43847152	43849909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43847260_43848557
transcript_60510.known	chr17	-	4206	12	FSM	ENSG00000108852.16	ENST00000377184.7	4206	12	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_2	15.8713838856692	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTGGCTCTGCTTTTCTTT	-43896136	True	NA	-1	True	ATTAAA	-16	NA	43900598	43875356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43877984_43879274_43879404_43879781_43879985_43880690_43880853_43881089_43881159_43881243_43881350_43881457_43881590_43882283_43882512_43882902_43883053_43883202_43883356_43898261_43898381_43900470
transcript_60513.nnic	chr17	-	794	3	NNC	ENSG00000282199.1	novel	445	2	NA	NA	-287	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTGTGAGTTATCA	-43917662	False	NA	NA	False	ATTAAA	-17	NA	43917686	43914431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_43914771_43917137_43917199_43917292
transcript_60514.nnic	chr17	-	1062	2	NNC	ENSG00000282199.1	novel	445	2	NA	NA	-461	1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTGTGAGTTATCA	-43917836	False	NA	NA	False	ATTAAA	-17	NA	43917860	43914431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_43914771_43917137
transcript_60515.known	chr17	-	445	2	FSM	ENSG00000282199.1	ENST00000591374.5	445	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTTTTGTGAGTTATC	-43917375	False	NA	NA	False	ATTAAA	-16	NA	43917399	43914432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43914771_43917292
transcript_60516.known	chr17	+	434	2	FSM	ENSG00000261514.2	ENST00000565120.2	544	2	106	4	106	-4	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGACTTCTGTGGGCC	43938348	False	NA	17	True	AATAAA	-17	NA	43938362	43938959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_43938398_43938560
transcript_60519.known	chr17	-	468	4	FSM	ENSG00000108849.8	ENST00000225992.8	468	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCCTGTCCTGTGTCTCTG	-43942466	False	NA	NA	False	AATAAA	-15	NA	43942476	43940803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43940953_43941142_43941215_43941463_43941655_43942420
transcript_60520.known	chr17	-	1053	7	FSM	ENSG00000131096.11	ENST00000360085.6	1053	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.79271573232759	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGAATGTATGCCTTTGTAT	-44004457	False	NA	-3	True	AATAAA	-19	NA	44004469	43952737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_43952981_43953108_43953190_43953295_43953484_43953849_43953976_43957937_43958029_43966287_43966533_44004390
transcript_6054.known	chr1	-	685	6	FSM	ENSG00000081870.12	ENST00000194214.10	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_5	57.4372701301167	2570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53941212	True	NA	-8	True	ATTAAA	-15	NA	53945699	53921560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53945554
transcript_60542.known	chr17	-	2552	5	FSM	ENSG00000161654.10	ENST00000293406.8	2552	5	0	0	0	0	multi-exon	FALSE	canonical	3	922	junction_1	61.5589148702282	1290	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGTCTGAACTTGATTT	-44049403	True	NA	-1	True	AGTAAA	-18	NA	44066671	44034327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44036301_44037411_44037539_44040146_44040257_44063800_44063935_44066463
transcript_60559.known	chr17	+	1718	7	FSM	ENSG00000141349.9	ENST00000588558.5	1718	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	402.683774471014	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCGGCCCCAATAAAGCC	44070723	False	NA	-10	True	NA	NA	NA	44070749	44076310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44071184_44071627_44071822_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_60561.known	chr17	+	1572	6	FSM	ENSG00000141349.9	ENST00000585361.5	1572	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	325.43853490329	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGGCAGCCAGGGCGGCCC	44070724	False	NA	-20	True	NA	NA	NA	44070750	44076300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44071243_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_60567.known	chr17	+	1573	6	FSM	ENSG00000141349.9	ENST00000269097.9	1573	6	0	0	0	0	multi-exon	TRUE	canonical	3	717	junction_4	76.5819822151399	4406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCCTTTCTTGCCTATGC	44070708	True	NA	24	True	AATAAA	-18	NA	44070734	44076344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44071184_44074159_44074267_44074679_44074771_44074968_44075088_44075309_44075452_44075679
transcript_6057.nnic	chr1	-	636	6	NNC	ENSG00000081870.12	novel	685	6	NA	NA	-633	0	at_least_one_novel_splicesite	FALSE	canonical	3	174	junction_5	193.392864397837	1556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTCAGTTTTTATTTA	-53946319	False	NA	-8	True	ATTAAA	-15	NA	53946332	53921560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_53921768_53923903_53923948_53928371_53928441_53930038_53930146_53939984_53940098_53946236
transcript_60572.known	chr17	+	2698	10	FSM	ENSG00000125319.15	ENST00000585683.6	2698	10	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	28.6239992547047	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140503	True	NA	4	True	AATAAA	-14	NA	44141929	44162476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154555_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_60578.known	chr17	+	2272	7	FSM	ENSG00000125319.15	ENST00000245382.6	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_6	54.2186929634666	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140595	True	NA	4	True	AATAAA	-14	NA	44142021	44162476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44154555_44154665_44154852_44154939_44155285_44155412_44161870
transcript_60581.known	chr17	+	2725	10	FSM	ENSG00000125319.15	ENST00000319977.8	2725	10	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	41.9349878964635	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGCCTCCCTTTCTTTT	44140479	True	NA	4	True	AATAAA	-14	NA	44141905	44162476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44142146_44145202_44145254_44147857_44149028_44150960_44151045_44152636_44152778_44154552_44154665_44154852_44154939_44155285_44155412_44157832_44157942_44161870
transcript_60587.known	chr17	-	916	3	FSM	ENSG00000267080.7	ENST00000588785.6	916	3	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATAATATTTTCTTTCTG	-44185538	True	NA	-14	True	AATAAA	-6	NA	44186707	44175967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44176643_44181622_44181721_44186564
transcript_60589.nic	chr17	-	961	2	ISM	ENSG00000267080.7	ENST00000667107.1	1827	3	-14	5860	-5	4089	5prime_fragment	FALSE	canonical	3	23	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTATTGTGGTACTTTTG	-44185559	True	NA	NA	False	CATAAA	-33	NA	44186728	44182296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44183094_44186564
transcript_60590.nnic	chr17	-	650	2	NNC	ENSG00000267080.7	novel	551	4	NA	NA	0	1114	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCCTCTTCGGTGTCTAGC	-44185548	True	NA	-7	True	TATAAA	-16	NA	44186717	44185271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_44185492_44186287
transcript_60593.known	chr17	-	2683	20	FSM	ENSG00000108312.15	ENST00000393606.7	2683	20	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_19	98.5191461628897	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATACGG	-44219630	False	NA	NA	False	NA	NA	NA	44219750	44207115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44219444
transcript_60594.known	chr17	-	4684	20	FSM	ENSG00000108312.15	ENST00000343638.9	4684	20	0	0	0	0	multi-exon	TRUE	canonical	3	122	junction_19	98.846953527191	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCTGTCTGGTCACTGGAA	-44220843	False	NA	-6	True	AATAAA	-20	NA	44220963	44205032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44207368_44207453_44207598_44207698_44207771_44207863_44207912_44209351_44209542_44209644_44209734_44210123_44210235_44210317_44210474_44210791_44210948_44211038_44211153_44211289_44211332_44211605_44211748_44211872_44212007_44212818_44212940_44213217_44213283_44215653_44215810_44215905_44215990_44216528_44216705_44218171_44218297_44220739
transcript_60608.known	chr17	+	2202	4	FSM	ENSG00000168591.16	ENST00000538716.7	2202	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	40.2850951207626	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGACAGCGTGAGCCCCAC	44186950	True	NA	2	True	AATAAA	-14	NA	44186971	44191929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187110_44187675_44187744_44189021_44189589_44190500
transcript_60616.nic	chr17	+	1737	4	NIC	ENSG00000168591.16	novel	1191	3	NA	NA	-3	0	intron_retention	FALSE	canonical	1	15	junction_3	39.2258418222817	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTCTGTGACTGAATAAAG	44185786	True	NA	-26	True	GGGGCT	-13	NA	44187202	44191691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_44187401_44189021_44189589_44190500_44190887_44191105
transcript_60620.known	chr17	+	1921	3	FSM	ENSG00000168591.16	ENST00000357984.7	1921	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	47	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCTTTCTGTGACAGAG	44186740	True	NA	13	True	AATAAA	-21	NA	44186985	44191730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187110_44189021_44189589_44190500
transcript_60624.nic	chr17	+	2023	3	NIC	ENSG00000168591.16	novel	747	5	NA	NA	-4	0	intron_retention	FALSE	canonical	3	38	junction_1	34.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44187154	False	NA	9	True	AATAAA	-17	NA	44187201	44191726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_44187432_44189021_44189589_44190500
transcript_60626.known	chr17	+	1918	3	FSM	ENSG00000168591.16	ENST00000589785.1	1918	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	35	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATTTTGTGGTCCTGCAG	44185845	True	NA	-5	True	AATAAA	-3	NA	44187261	44191712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187401_44189021_44189589_44190500
transcript_60628.known	chr17	+	2418	3	FSM	ENSG00000168591.16	ENST00000319511.6	2418	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	40	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCAGCCTCTTTCTGTGAC	44185789	True	NA	9	True	AATAAA	-17	NA	44187205	44191726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44187744_44188934_44189589_44190500
transcript_60632.known	chr17	+	528	2	FSM	ENSG00000267394.2	ENST00000586560.1	528	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTCCAGAAAAGTCTTTAAA	NA	False	NA	NA	False	NA	NA	NA	44198881	44216565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44198935_44216090
transcript_60634.known	chr17	+	1821	11	FSM	ENSG00000108309.14	ENST00000225441.11	1821	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_4	2.95972971738975	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGGGAGACAGAGACATCAA	44308549	True	NA	22	True	AATAAA	-27	NA	44308595	44317870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44317484
transcript_60635.known	chr17	+	2005	11	FSM	ENSG00000108309.14	ENST00000426726.8	2005	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.29241552663087	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	44308554	True	NA	11	True	AATAAA	-15	NA	44308600	44318670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44308940_44312579_44312696_44313103_44313253_44313417_44313504_44314734_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316384_44316523_44316618_44316726_44318095
transcript_60636.known	chr17	+	3686	10	FSM	ENSG00000108309.14	ENST00000587483.5	3686	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.25841739969226	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGGCAGCCTTGTATGTGGG	44310657	False	NA	10	True	AATAAA	-14	NA	44310703	44318669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44311514_44312579_44312696_44313118_44313253_44313417_44314825_44314928_44315010_44315154_44315321_44315451_44315610_44316389_44316523_44316618_44316726_44318095
transcript_60645.known	chr17	-	696	3	FSM	ENSG00000267750.6	ENST00000655016.1	696	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCCGAGGCAGGTGGATCA	-44308143	False	NA	NA	False	NA	NA	NA	44308276	44303740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44304208_44307291_44307501_44308256
transcript_60646.known	chr17	+	746	2	FSM	ENSG00000108309.14	ENST00000588564.1	746	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGCCTTGTATGTGGGG	44316429	False	NA	11	True	AATAAA	-15	NA	44316554	44318670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44316726_44318095
transcript_60650.known	chr17	-	1542	12	FSM	ENSG00000013306.16	ENST00000590194.5	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_11	808.774095276353	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGATGAACTTCTGCCTG	-44298510	True	NA	NA	False	NA	NA	NA	44324809	44319641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44322807_44322853_44323283_44323344_44323477_44323591_44324710
transcript_60654.known	chr17	-	1581	12	FSM	ENSG00000013306.16	ENST00000377095.10	1581	12	0	0	0	0	multi-exon	FALSE	canonical	3	667	junction_8	627.020726719251	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGGTGCCTGTCCCTCT	-44298524	True	NA	NA	False	NA	NA	NA	44324823	44319627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322553_44322807_44322853_44323283_44323344_44323477_44323578_44324710
transcript_60658.known	chr17	-	1274	11	FSM	ENSG00000013306.16	ENST00000537904.6	1274	11	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_8	831.950575455057	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCAGGGCTGTCCCTCTGG	-44298528	True	NA	NA	False	GGGGCT	-32	NA	44324827	44319869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44320117_44320195_44320277_44320354_44320437_44320621_44320732_44321057_44321232_44321433_44321559_44321699_44321768_44322418_44322529_44323283_44323344_44323477_44323578_44324710
transcript_60678.nic	chr17	+	2401	13	NIC	ENSG00000030582.18	novel	2130	13	NA	NA	0	0	intron_retention	FALSE	canonical	3	151	junction_1	210.590175986968	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	44330720	True	NA	21	True	AATAAA	-19	NA	44345301	44353106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_44345606_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_60680.known	chr17	+	2130	13	FSM	ENSG00000030582.18	ENST00000053867.8	2130	13	0	0	0	0	multi-exon	FALSE	canonical	3	542	junction_1	107.422161742042	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTGTCTGATTTGCCGCCC	44330720	True	NA	21	True	AATAAA	-19	NA	44345301	44353106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44350441_44350578_44350690_44350801_44351036_44351164_44351362_44351461_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_60681.known	chr17	+	1632	9	FSM	ENSG00000030582.18	ENST00000589265.5	1632	9	0	0	0	0	multi-exon	TRUE	canonical	2	53	junction_5	299.310457552021	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAAAGTTTGTACACTTTC	44330723	True	NA	-3	True	NA	NA	NA	44345304	44353082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44345335_44349157_44349303_44349425_44349552_44349666_44349752_44350227_44350341_44351549_44351796_44352014_44352249_44352340_44352572_44352660
transcript_60685.nic	chr17	-	990	7	ISM	ENSG00000005961.19	ENST00000262407.6	3479	30	13430	0	-35	0	3prime_fragment	FALSE	canonical	2	47	junction_2	14.5792851524194	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375839	False	NA	-36	True	AATAAA	-16	NA	44376219	44372180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44372424_44374353_44374471_44374658_44374761_44374997_44375112_44375590_44375717_44375832_44375986_44376084
transcript_60686.known	chr17	-	579	7	FSM	ENSG00000005961.19	ENST00000589645.5	579	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	15.4533347713545	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCCCTAGCCCCAATATACC	-44384983	True	NA	NA	False	NA	NA	NA	44385363	44383763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44383947_44384084_44384139_44384310_44384355_44384537_44384586_44384947_44385077_44385163_44385203_44385281
transcript_60687.nnic	chr17	-	888	6	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	23.5151015307185	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375839	False	NA	-36	True	AATAAA	-16	NA	44376219	44372180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_44372424_44374353_44374471_44374997_44375112_44375590_44375717_44375832_44375986_44376084
transcript_60689.nnic	chr17	-	771	5	NIC	ENSG00000005961.19	novel	3479	30	NA	NA	-35	0	combination_of_known_splicesites	FALSE	canonical	3	11	junction_1	29.1322415890024	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375839	False	NA	-36	True	AATAAA	-16	NA	44376219	44372180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_44372424_44374997_44375112_44375590_44375717_44375832_44375986_44376084
transcript_60693.known	chr17	-	496	3	FSM	ENSG00000005961.19	ENST00000587295.5	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	37	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGAGCATGCTGCCTCCT	-44375804	False	380	-36	True	AATAAA	-16	NA	44376184	44372180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44372424_44375832_44375986_44376084
transcript_60694.nic	chr17	-	543	2	ISM	ENSG00000005961.19	ENST00000648408.1	2618	25	10383	0	1227	0	3prime_fragment	FALSE	canonical	3	14	junction_1	0	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGCATGCTGCCTCCTT	-44374783	False	NA	-35	True	AATAAA	-17	NA	44374957	44372179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44372424_44374658
transcript_60699.nnic	chr17	-	1574	9	NNC	ENSG00000186566.13	novel	4713	9	NA	NA	-176	1302	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	35.2455670971542	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAAAAATCCAGCAAACACA	-44503590	False	NA	NA	False	AAAAAG	-12	NA	44503606	44400034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_44400338_44401041_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_60702.known	chr17	-	4713	9	FSM	ENSG00000186566.13	ENST00000587228.5	4713	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	41.0670183967621	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGAAGTTTGCTTTCAGT	-44498748	True	NA	NA	False	NA	NA	NA	44503404	44397415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44467096_44467115_44474828_44474904_44503325
transcript_60703.known	chr17	-	6832	8	FSM	ENSG00000186566.13	ENST00000591680.6	6832	8	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_2	13.5631553730491	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAGCAGAGTCTGTCGTAA	-44498750	True	NA	-4	True	AATAAA	-18	NA	44503406	44395280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44401454_44405920_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_60707.nic	chr17	-	811	7	ISM	ENSG00000186566.13	ENST00000591680.6	6832	8	-200	10688	-176	-4561	5prime_fragment	FALSE	canonical	3	84	junction_1	14.6334851928339	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCGGCGGCTCCATGAGT	-44503590	False	NA	NA	False	AAAAAG	-2	NA	44503606	44405968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_44406052_44424348_44424493_44435064_44435152_44436477_44436546_44464471_44464545_44474828_44474904_44503325
transcript_60711.known	chr17	-	650	3	FSM	ENSG00000186566.13	ENST00000592154.1	650	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	62.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGGCAGGCGCCTGTAGTC	-44503414	False	444	NA	False	NA	NA	NA	44503430	44473289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44473760_44474828_44474904_44503325
transcript_60712.known	chr17	-	565	2	FSM	ENSG00000186566.13	ENST00000588554.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAATGTTATATTAAAAACAT	-44498750	True	NA	NA	False	NA	NA	NA	44503406	44474419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44474904_44503325
transcript_60714.known	chr17	-	2067	5	FSM	ENSG00000180329.14	ENST00000588210.1	2067	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	130.616566713415	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAAATAACCACCTTTAAA	-44684887	True	NA	-52	True	NA	NA	NA	44689763	44677482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44679044_44680584_44680653_44682002_44682139_44683871_44683960_44689549
transcript_60719.known	chr17	-	2058	4	FSM	ENSG00000180329.14	ENST00000457422.6	2058	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	148.041285532861	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTCTGACTTATTTTGA	-44684903	True	NA	-9	True	AATAAA	-40	NA	44689779	44677439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44679044_44682002_44682139_44683871_44683960_44689549
transcript_60721.known	chr17	-	721	3	FSM	ENSG00000180329.14	ENST00000588687.5	721	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	157	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTTTTTGACAAATAAGAGA	-44684849	True	NA	NA	False	AATACA	-12	NA	44689725	44673068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44673526_44683871_44683960_44689549
transcript_60723.known	chr17	-	692	3	FSM	ENSG00000180329.14	ENST00000592333.1	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAATACAATATAGCTGTA	-44684869	True	NA	NA	False	AAAACA	-38	NA	44689745	44681730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44682139_44683871_44683960_44689549
transcript_60724.known	chr17	+	2272	11	FSM	ENSG00000180336.18	ENST00000472403.5	2272	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.3614670775909	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTATTTCTTCCACTCAT	NA	False	NA	NA	False	AATAAA	-12	NA	44668221	44690308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44668234_44669382_44669518_44673365_44673547_44673975_44674095_44676949_44677087_44678942_44679050_44687649_44687749_44687853_44688024_44688177_44688294_44688940_44689441_44689612
transcript_60726.known	chr17	+	1810	15	FSM	ENSG00000161692.18	ENST00000393547.6	1810	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	23.1943870761168	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAATCTTTTATGTCTTTC	NA	False	NA	3	True	AATAAA	-16	NA	44708607	44752264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44732177_44732266_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340_44748466_44750594_44750678_44751939
transcript_60734.known	chr17	+	2998	12	FSM	ENSG00000161692.18	ENST00000526924.5	2998	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	13.8331258904423	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCCACTTTTTCTT	44705792	True	NA	NA	False	NA	NA	NA	44708697	44750239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964_44731016_44734089_44734164_44736829_44736867_44738378_44738425_44741335_44741453_44747082_44747192_44747390_44747516_44748340
transcript_60745.known	chr17	+	836	5	FSM	ENSG00000161692.18	ENST00000528766.5	836	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.64736790015417	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCCACCTCCAACTCTG	44705750	True	NA	NA	False	NA	NA	NA	44708655	44731218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708840_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_60746.known	chr17	+	933	5	FSM	ENSG00000161692.18	ENST00000532789.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	22.544400635191	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACATGGCGAAACCCCATCT	44708539	True	NA	NA	False	NA	NA	NA	44708861	44731422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44708939_44709303_44709367_44722879_44723023_44729904_44730097_44730964
transcript_60755.known	chr17	-	586	3	FSM	ENSG00000182963.11	ENST00000591424.5	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	76	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGGTGAAGCAGACAAGAAGG	-44827744	True	NA	-132	True	NA	NA	NA	44830816	44805506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44805838_44807393_44807470_44830637
transcript_60756.known	chr17	-	3364	28	FSM	ENSG00000108883.13	ENST00000592576.5	3364	28	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_23	204.343621140191	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCTTACATTCTGAATATA	-44882016	True	NA	-62	True	NA	NA	NA	44899431	44850865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883129_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_60757.known	chr17	-	4326	28	FSM	ENSG00000108883.13	ENST00000426333.7	4326	28	0	0	0	0	multi-exon	TRUE	canonical	3	837	junction_16	81.9882724391623	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCTGTTGCATGAT	-44882030	True	NA	-5	True	NA	NA	NA	44899445	44849947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44851370_44851709_44851818_44852408_44852563_44853295_44853391_44853516_44853636_44854268_44854357_44854555_44854683_44854917_44855005_44857074_44857158_44859079_44859182_44859904_44860046_44860431_44860544_44862712_44862907_44863654_44863783_44864929_44865066_44867806_44867898_44868286_44868351_44872445_44872571_44875933_44876101_44879555_44879639_44880553_44880645_44881686_44881723_44883092_44883159_44883648_44883725_44885255_44885335_44886584_44886751_44894416_44894526_44899368
transcript_60771.known	chr17	+	849	4	FSM	ENSG00000167131.17	ENST00000357776.6	849	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.34209919681348	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTACCAGGTTGACTGATGC	44899397	True	NA	NA	False	NA	NA	NA	44899715	44902800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44899844_44900989_44901142_44901519_44901653_44902364
transcript_60775.known	chr17	+	3397	4	FSM	ENSG00000214447.5	ENST00000331733.4	3397	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	3.2659863237109	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCTGCTTTGCTTTCT	44899455	True	NA	8	True	NA	NA	NA	44899773	44905390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44899860_44900989_44901142_44901519_44901653_44902364
transcript_6078.known	chr1	+	1764	9	FSM	ENSG00000116212.15	ENST00000371370.8	1764	9	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	65.5809375886012	488	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942417	True	NA	23	True	AATAAA	-19	NA	53946349	53968168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53946550_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_60782.known	chr17	-	594	4	FSM	ENSG00000131095.14	ENST00000585543.6	594	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0.942809041582063	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCAGCTTGCTGCCCTAGG	-44911417	True	NA	NA	False	NA	NA	NA	44911515	44907204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_44907389_44908063_44908150_44910614_44910659_44911235
transcript_60784.nnic	chr17	-	345	3	NNC	ENSG00000108883.13	novel	427	2	NA	NA	0	1495	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	514	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAGGTTTTACAGTGT	-44882030	True	NA	NA	False	NA	NA	NA	44899445	44892638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_44892713_44894331_44894526_44899368
transcript_60789.known	chr17	+	1028	1	FSM	ENSG00000267334.1	ENST00000591013.1	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGGATGGCTTACAGCAT	44947900	True	NA	NA	False	AATAAA	-10	NA	44947911	44948939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_44947900_44948900
transcript_60791.known	chr17	+	4881	12	FSM	ENSG00000136448.13	ENST00000258960.7	4881	12	0	0	0	0	multi-exon	FALSE	canonical	2	498	junction_8	77.3345207470348	682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCCTGGTATTCCT	45047821	True	NA	NA	False	AATAAA	-19	NA	45061316	45109016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_60792.known	chr17	+	1374	11	FSM	ENSG00000136448.13	ENST00000590114.6	1374	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	228.401926436709	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCACCAGTGCGATTCT	45047834	True	NA	NA	False	NA	NA	NA	45061329	45105639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618
transcript_60795.known	chr17	+	1328	8	FSM	ENSG00000136448.13	ENST00000590310.2	1328	8	0	0	0	0	multi-exon	FALSE	canonical	3	690	junction_5	29.119738729485	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACTTAGTGAACCTTCA	45047805	True	NA	NA	False	AGTAAA	-19	NA	45061300	45099819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404
transcript_6080.nic	chr1	+	1867	9	NIC	ENSG00000116212.15	novel	1764	9	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	101.591092129182	330	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942400	True	NA	23	True	AATAAA	-19	NA	53946332	53968168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_53946550_53947861_53947982_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_60804.known	chr17	+	3058	13	FSM	ENSG00000136448.13	ENST00000676828.1	3058	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	211.572419962737	643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACTTGTTTCTAATAAAGA	45047775	True	NA	NA	False	AATACA	-3	NA	45061270	45108980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45061461_45081643_45081753_45086507_45086653_45093684_45093804_45096193_45096286_45097127_45097245_45098381_45098553_45099404_45099514_45102950_45103122_45103708_45103877_45104858_45104997_45105618_45105946_45107778
transcript_60806.known	chr17	-	1000	5	FSM	ENSG00000172992.13	ENST00000651974.1	2171	5	13	1158	-1	-760	multi-exon	FALSE	canonical	0	0	junction_4	68.521438251105	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCACAGGGCTCGCTGCCAT	-45047282	True	NA	NA	False	NA	NA	NA	45051619	45024501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051360
transcript_60807.known	chr17	-	990	5	FSM	ENSG00000172992.13	ENST00000452796.7	2027	5	70	967	5	-569	multi-exon	FALSE	canonical	3	49	junction_4	47.5447157947127	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACACACACACACACACAC	-45047273	True	NA	NA	False	NA	NA	NA	45051610	45024310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035000_45051552
transcript_60808.known	chr17	-	2122	5	FSM	ENSG00000172992.13	ENST00000310604.9	2112	5	-8	-2	4	0	multi-exon	FALSE	canonical	1	2	junction_4	67.6623048676292	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGATTCCCAGACTTG	-45059437	True	NA	-15	True	AATAAA	-28	NA	45061109	45023345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45024725_45030091_45030180_45034186_45034391_45034773_45035003_45060887
transcript_6081.nnic	chr1	+	1632	9	NNC	ENSG00000116212.15	novel	611	3	NA	NA	263	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	91.0397406356147	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942688	False	NA	23	True	AATAAA	-19	NA	53946620	53968168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_53946689_53947787_53947822_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_60811.nic	chr17	-	888	5	FSM	ENSG00000172992.13	ENST00000685712.1	927	5	39	0	25	0	multi-exon	FALSE	canonical	1	1	junction_1	68.2898235464114	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGACGACAGCTGTGGCT	-45059383	True	NA	NA	False	AATAAA	-38	NA	45061055	45031939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45032122_45033934_45034043_45034186_45034391_45034773_45035000_45060887
transcript_60813.nic	chr17	-	742	5	FSM	ENSG00000172992.13	ENST00000592902.6	786	5	-60	104	2	5	multi-exon	FALSE	canonical	1	1	junction_1	67.116968793294	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAAAGCTCTTTCACTGTG	-45047341	True	NA	NA	False	ATTAAA	-21	NA	45051678	45032043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45032122_45033934_45034043_45034186_45034391_45034773_45035000_45051552
transcript_60815.known	chr17	-	727	4	FSM	ENSG00000172992.13	ENST00000693328.1	1538	4	0	811	0	332	multi-exon	FALSE	canonical	3	7	junction_1	68.1876495822781	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGACTTTCTAGCTGTGT	-45047324	True	NA	NA	False	NA	NA	NA	45051661	45033854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45034043_45034186_45034391_45034773_45035000_45051552
transcript_60819.nnic	chr17	+	1916	10	NNC	ENSG00000181513.15	novel	1998	12	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_7	22.1560124771785	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45134443	True	NA	12	True	AATAAA	-13	NA	45135656	45144176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137891_45137989_45139020_45139161_45143442
transcript_60821.known	chr17	+	1579	10	FSM	ENSG00000181513.15	ENST00000586346.5	1579	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	14.2473735937887	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCGATCGGGTCTCAGCCCC	45134433	True	NA	NA	False	NA	NA	NA	45135646	45143850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137721_45137831_45137912_45137989_45139020_45139161_45143442
transcript_60823.known	chr17	+	1453	10	FSM	ENSG00000181513.15	ENST00000376955.8	1453	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	25.5255862921022	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGCGACCTTGCTTTCCT	45134480	True	NA	2	True	NA	NA	NA	45135693	45142959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137922_45137989_45139020_45139161_45142582
transcript_60824.known	chr17	+	1827	10	FSM	ENSG00000181513.15	ENST00000321854.13	1827	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	8.09663853432741	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45134473	True	NA	12	True	AATAAA	-13	NA	45135686	45144176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45139020_45139161_45143442
transcript_60829.known	chr17	+	1684	9	FSM	ENSG00000181513.15	ENST00000592162.5	1684	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	21.1005775987294	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGCTGTCTGGTCCCC	45134476	True	NA	12	True	AATAAA	-13	NA	45135689	45144176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45135954_45136107_45136233_45136499_45136621_45136691_45136777_45137018_45137140_45137367_45137455_45137759_45137831_45137912_45137989_45143442
transcript_60831.known	chr17	-	1741	1	FSM	ENSG00000276728.1	ENST00000612013.1	1741	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGATTTCGTTCTTTTTATT	-45148460	False	NA	NA	False	NA	NA	NA	45148470	45146729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45146700_45148500
transcript_60832.known	chr17	+	1528	4	FSM	ENSG00000168517.11	ENST00000307275.7	1528	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.6386775541195	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTAGGATTGATTTCAC	45160680	True	NA	25	True	ATTAAA	-25	NA	45160699	45170040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45160944_45162487_45162636_45162749_45162860_45169014
transcript_60835.known	chr17	+	1436	4	FSM	ENSG00000168517.11	ENST00000589230.6	1436	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	38.1255236758206	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160917	True	NA	20	True	ATTAAA	-20	NA	45161874	45170035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45162032_45162487_45162636_45162749_45162860_45169014
transcript_60836.known	chr17	+	1345	3	FSM	ENSG00000168517.11	ENST00000585340.2	1345	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160710	False	NA	20	True	ATTAAA	-20	NA	45160729	45170035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45160944_45162749_45162860_45169014
transcript_60837.known	chr17	+	1302	3	FSM	ENSG00000168517.11	ENST00000593138.6	1302	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	53	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160901	True	NA	20	True	ATTAAA	-20	NA	45161077	45170035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161249_45162749_45162860_45169014
transcript_60838.known	chr17	+	1176	3	FSM	ENSG00000168517.11	ENST00000591576.5	1176	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	49	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160937	True	NA	20	True	ATTAAA	-20	NA	45161894	45170035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161940_45162749_45162860_45169014
transcript_60840.known	chr17	+	1246	3	FSM	ENSG00000168517.11	ENST00000592695.1	1246	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	41	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160959	True	NA	20	True	ATTAAA	-20	NA	45161916	45170035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45162032_45162749_45162860_45169014
transcript_60841.known	chr17	+	3625	1	FSM	ENSG00000186834.4	ENST00000332499.4	3625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	106	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTTTTCTTCGTGTTTTTT	45147309	True	NA	25	True	ATTAAA	-15	NA	45148474	45152099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45148500_45152100
transcript_60842.known	chr17	+	1323	4	FSM	ENSG00000168517.11	ENST00000591070.6	1323	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	44.2743969153982	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGTATCTAGGATTGAT	45160938	True	NA	20	True	ATTAAA	-20	NA	45161895	45170035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45161940_45162487_45162636_45162749_45162860_45169014
transcript_60843.known	chr17	+	2487	14	FSM	ENSG00000184922.15	ENST00000587489.5	2487	14	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	5.43275187169525	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCGTCGGCTCCATGC	NA	False	NA	7	True	AATAAA	-14	NA	45241074	45247318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45241231_45241381_45241635_45241846_45242147_45242340_45242466_45243117_45243321_45243790_45244026_45244175_45244245_45244818_45244900_45244978_45245109_45245252_45245417_45245631_45245734_45245877_45245974_45246209_45246331_45246866
transcript_60845.known	chr17	+	2175	4	FSM	ENSG00000267278.6	ENST00000655903.1	2175	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247474	True	NA	-16	True	NA	NA	NA	45247934	45269814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45248004_45255134_45255219_45267112_45267329_45268008
transcript_60847.nnic	chr17	+	463	3	NNC	ENSG00000267278.6	novel	488	3	NA	NA	0	-7623	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	13.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGCGTTACTGGGA	45247455	True	NA	NA	False	TATAAA	-22	NA	45247915	45259843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_45248004_45255134_45255219_45259552
transcript_60848.known	chr17	+	2090	3	FSM	ENSG00000267278.6	ENST00000590100.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	9.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTAATAAACTGGTAAATGT	45247475	True	NA	-16	True	NA	NA	NA	45247935	45269814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45248004_45267112_45267329_45268008
transcript_60849.known	chr17	+	2296	3	FSM	ENSG00000267278.6	ENST00000586450.6	2296	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	7.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTAAATGTAAGGAAGTGT	NA	False	NA	-6	True	AATAAA	-2	NA	45262079	45269824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45262344_45267112_45267329_45268008
transcript_60851.nic	chr17	-	641	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-58	2081	-58	0	5prime_fragment	FALSE	canonical	3	11	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	NA	False	NA	-36	True	TATAAA	-21	NA	45248397	45247266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_60852.nnic	chr17	-	638	3	NNC	ENSG00000233483.3	novel	579	4	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	NA	False	NA	-36	True	TATAAA	-21	NA	45248353	45247266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_45247517_45247874_45248090_45248180
transcript_60853.nic	chr17	-	546	3	ISM	ENSG00000233483.3	ENST00000420431.2	579	4	-58	2176	-58	19	5prime_fragment	FALSE	canonical	3	11	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCGGGTGGCTGCGG	NA	False	NA	3	True	AGTAAA	-19	NA	45248397	45247361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_45247517_45247874_45248049_45248180
transcript_60855.nnic	chr17	-	543	3	NNC	ENSG00000233483.3	novel	579	4	NA	NA	-14	19	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCTGCGGGTGGCTGCGG	NA	False	NA	3	True	AGTAAA	-19	NA	45248353	45247361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_45247517_45247874_45248090_45248180
transcript_60856.known	chr17	-	393	2	FSM	ENSG00000233483.3	ENST00000589518.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGGCTGGGGCTTGCGG	-45247676	False	NA	-36	True	TATAAA	-21	NA	45247843	45247266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45247517_45247700
transcript_60859.known	chr17	-	386	2	FSM	ENSG00000267446.1	ENST00000589730.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGATATTTGTACACCCATG	NA	False	NA	NA	False	AATAAA	-28	NA	45372057	45371401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45371592_45371861
transcript_60862.known	chr17	-	3243	4	FSM	ENSG00000214425.9	ENST00000579913.5	3243	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	20.8859335970941	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAAAAAAATTAGCCGGGC	NA	False	NA	NA	False	ACTAAA	-3	NA	45515156	45506740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_45508540_45510243_45510294_45513184_45513290_45513867
transcript_60863.known	chr17	+	348	1	FSM	ENSG00000204652.6	ENST00000393490.3	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	219	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	45608570	45608918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45608600_45608900
transcript_60895.known	chr17	+	546	4	FSM	ENSG00000204650.14	ENST00000585118.5	546	4	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_3	31.7909840468436	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTACGAAGGCCTGAACTGG	45614507	True	NA	NA	False	NA	NA	NA	45620327	45636394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45636282
transcript_60897.known	chr17	+	9678	4	FSM	ENSG00000204650.14	ENST00000591271.5	9678	4	0	0	0	0	multi-exon	TRUE	canonical	3	26	junction_3	82.6599459633665	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGATTTGCCAGAGAATTT	45614519	True	NA	NA	False	AATAAA	-19	NA	45620339	45655156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903_45630159_45645900
transcript_60899.known	chr17	+	758	4	FSM	ENSG00000204650.14	ENST00000580220.2	758	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	68.8444300982698	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTACAGAAACTGGCACATTC	45616087	False	NA	NA	False	NA	NA	NA	45621907	45636344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45622042_45627375_45627683_45629903_45630159_45636282
transcript_60900.known	chr17	+	718	3	FSM	ENSG00000204650.14	ENST00000582491.5	718	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	29	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTTTGTTTTTTGTTT	45614521	True	NA	NA	False	NA	NA	NA	45620341	45630456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45620373_45621907_45622042_45629903
transcript_60902.known	chr17	+	1107	9	FSM	ENSG00000186868.17	ENST00000334239.12	1107	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.278719262151	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCGGTCAATAATTGTGGAG	45894657	False	NA	NA	False	NA	NA	NA	45894667	46024183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_45894687_45962320_45962471_45978374_45978441_45987039_45987096_45991459_45991587_45996398_45996665_46014242_46014325_46018617_46018731_46023955
transcript_60905.known	chr17	-	5309	15	FSM	ENSG00000120071.15	ENST00000262419.10	5309	15	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_14	25.2146904054937	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGGAAAAATTGAAAAAAA	-46191619	False	NA	-48	True	NA	NA	NA	46192800	46029955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46031704_46032046_46032300_46033079_46033193_46033402_46033461_46034160_46034286_46038537_46038687_46039026_46039216_46039701_46039885_46050532_46050705_46066536_46066733_46067548_46067668_46082440_46082543_46094559_46094702_46170854_46172233_46192418
transcript_60907.known	chr17	-	2655	2	FSM	ENSG00000120071.15	ENST00000639520.1	2655	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAAAACGAGAGAATTAA	-46223255	True	NA	NA	False	AGTAAA	-14	NA	46225376	46221185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46223805_46225340
transcript_60908.known	chr17	+	517	2	FSM	ENSG00000214401.5	ENST00000398275.5	527	2	8	2	8	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGATTGAGTTCTAATGTT	NA	False	NA	NA	False	AATAAA	-15	NA	46193575	46196721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46193739_46196367
transcript_6091.known	chr1	+	1727	8	FSM	ENSG00000116212.15	ENST00000319223.8	1727	8	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	51.0138036541612	497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGCTTGTGGATTATAG	53942420	True	NA	23	True	AATAAA	-19	NA	53946352	53968168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_53946550_53951985_53952473_53958148_53958281_53960355_53960475_53962033_53962123_53962295_53962410_53966295_53966381_53967664
transcript_60916.nnic	chr17	-	1270	6	NIC	ENSG00000228696.10	novel	2181	5	NA	NA	4	-1220	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	127.985936727439	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTTTGAAATGGTGCT	NA	False	NA	NA	False	ATTAAA	-25	NA	46361793	46286495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_46286966_46299525_46299666_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_60923.known	chr17	+	5177	14	FSM	ENSG00000176681.14	ENST00000320254.5	5177	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	11.9193542575577	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAATTGTGATTCCGATG	NA	False	NA	NA	False	AATAAA	-22	NA	46295130	46337794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46297743_46299793_46299866_46302637_46302710_46305508_46305581_46306228_46306310_46322321_46322394_46322952_46323028_46328391_46328511_46330449_46331982_46332551_46332657_46335544_46335595_46337295_46337351_46337428_46337569_46337674
transcript_60925.known	chr17	-	1140	5	FSM	ENSG00000228696.10	ENST00000570618.5	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	136.208250484323	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAAGAAAGCAAGAAACA	NA	False	NA	NA	False	ATTAAA	-10	NA	46361764	46274783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46275419_46299525_46299666_46352819_46352931_46358249_46358415_46361675
transcript_60929.known	chr17	-	2181	5	FSM	ENSG00000228696.10	ENST00000656849.1	2181	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	137.281417169259	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGAGACTCTGTCTCAAA	NA	False	NA	NA	False	NA	NA	NA	46361750	46285275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46286966_46299525_46299666_46352819_46352931_46358249_46358415_46361675
transcript_60933.known	chr17	-	731	5	FSM	ENSG00000228696.10	ENST00000575960.5	731	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	93.6919820475584	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGCTGTCAAAAAAGAAGAG	NA	False	NA	NA	False	NA	NA	NA	46361718	46330452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46330599_46339508_46339775_46352819_46352931_46358249_46358415_46361675
transcript_60941.known	chr17	-	581	4	FSM	ENSG00000228696.10	ENST00000575698.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	136.090656059359	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTGCCATTCAGAGAGG	NA	False	NA	NA	False	NA	NA	NA	46361726	46330344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46330599_46352819_46352931_46358249_46358415_46361675
transcript_60943.known	chr17	-	491	4	FSM	ENSG00000228696.10	ENST00000571246.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	134.687292149878	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	NA	False	NA	NA	False	AATAAA	-18	NA	46361732	46334679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46334838_46352819_46352931_46358249_46358415_46361675
transcript_60944.known	chr17	-	5240	4	FSM	ENSG00000228696.10	ENST00000450673.4	5240	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	58.7669597270061	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	NA	False	NA	NA	False	AATAAA	-24	NA	46361766	46334901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46339775_46352819_46352931_46358249_46358415_46361675
transcript_60951.known	chr17	-	798	5	FSM	ENSG00000228696.10	ENST00000434041.6	798	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	138.095075944076	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATCTCTCTTGCTTGGA	NA	False	NA	NA	False	AATAAA	-22	NA	46361745	46299133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46299446_46299525_46299666_46352819_46352931_46358249_46358415_46361675
transcript_60959.nnic	chr17	-	1068	6	NNC	ENSG00000185829.18	novel	5242	4	NA	NA	-52	12335	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_2	120.930723970379	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGGTGTTCTATGGC	-46579722	False	NA	NA	False	AATAAA	-27	NA	46579743	46504366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_46504610_46517093_46517234_46557364_46557631_46570758_46570870_46576174_46576340_46579600
transcript_60971.nnic	chr17	-	781	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	-31	12335	at_least_one_novel_splicesite	FALSE	canonical	3	45	junction_1	123.103614894121	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGAGGTGTTCTATGGC	-46579701	False	NA	NA	False	AATAAA	-27	NA	46579722	46504366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_46504610_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_60972.nnic	chr17	-	753	5	NNC	ENSG00000185829.18	novel	798	5	NA	NA	-34	8023	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	132.301502259045	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCAATCATAACATGATT	-46579704	False	NA	NA	False	AATAAA	-18	NA	46579725	46508678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_46508891_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_60973.known	chr17	-	798	5	FSM	ENSG00000185829.18	ENST00000445552.6	798	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	135.263400445205	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAATCTCTCTTGCTTGGA	-46579649	False	NA	NA	False	AATAAA	-22	NA	46579670	46516701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46517014_46517093_46517234_46570758_46570870_46576174_46576340_46579600
transcript_60983.known	chr17	-	524	4	FSM	ENSG00000185829.18	ENST00000622488.6	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	134.71038894194	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGTGGTGTGATCTTGGCT	-46579652	False	NA	NA	False	NA	NA	NA	46579673	46528684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46528860_46570758_46570870_46576174_46576340_46579600
transcript_60984.known	chr17	-	491	4	FSM	ENSG00000185829.18	ENST00000570550.5	491	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	137.995974176383	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGAAACCTGAGTCC	-46579636	False	NA	NA	False	AATAAA	-18	NA	46579657	46552532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46552691_46570758_46570870_46576174_46576340_46579600
transcript_60985.known	chr17	-	5242	4	FSM	ENSG00000185829.18	ENST00000336125.6	5242	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	61.4220373047546	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTTGTTATATTGTACT	-46579670	False	NA	NA	False	AATAAA	-24	NA	46579691	46552755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46557631_46570758_46570870_46576174_46576340_46579600
transcript_60990.known	chr17	+	3082	6	FSM	ENSG00000238083.8	ENST00000572638.1	3082	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	8.44748483277715	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGAATGAAAATTGTGAT	NA	False	NA	NA	False	AATAAA	-15	NA	46547224	46555643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46549844_46550414_46550520_46553399_46553450_46555151_46555207_46555284_46555425_46555530
transcript_60991.known	chr17	+	3983	21	FSM	ENSG00000073969.18	ENST00000398238.8	3983	21	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_15	33.1012084371553	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	12	True	AATAAA	-20	NA	46590668	46757464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852_46713987_46726548_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_60994.nic	chr17	+	2148	15	ISM	ENSG00000073969.18	ENST00000398238.8	3983	21	40	43158	40	-37277	5prime_fragment	FALSE	canonical	3	220	junction_7	28.0149377064072	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGATTTTTTAAAGTTCTTTC	NA	False	NA	6	True	AATAAA	-18	NA	46590708	46714306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_46590788_46624243_46624330_46626612_46626713_46630410_46630451_46637375_46637543_46640053_46640162_46640642_46640719_46643103_46643260_46674413_46674614_46692902_46693069_46693846_46693922_46694474_46694663_46704758_46704855_46710962_46711120_46713852
transcript_60995.nnic	chr17	+	2348	9	NNC	ENSG00000073969.18	novel	3983	21	NA	NA	40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	89.4245492021067	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTGTAGACCAGTGTTT	NA	False	NA	12	True	AATAAA	-20	NA	46590708	46757464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_46590788_46624243_46624330_46626612_46626713_46726580_46726616_46728854_46728935_46749772_46749908_46751502_46751617_46755313_46755370_46755801
transcript_60997.known	chr17	-	586	1	FSM	ENSG00000213326.4	ENST00000484240.1	586	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	695	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAATGGCTAAATAAAA	NA	False	NA	NA	False	NA	NA	NA	46722167	46721581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46721600_46722200
transcript_60998.known	chr17	-	3287	5	FSM	ENSG00000108379.10	ENST00000225512.6	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	2.69258240356725	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATACATTGTACACTGTG	NA	False	NA	-13	True	ATTAAA	-23	NA	46818692	46762505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46764622_46768311_46768800_46769782_46770049_46773667_46773910_46818517
transcript_61000.known	chr17	-	395	3	FSM	ENSG00000261886.1	ENST00000572349.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTAAACATTACCCAGTG	-46922950	True	NA	NA	False	AATAAA	-8	NA	46923034	46916769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_46916832_46917164_46917274_46922810
transcript_61002.nic	chr17	+	969	6	ISM	ENSG00000262633.2	ENST00000639822.1	1564	8	-32	82937	-5	-80159	5prime_fragment	FALSE	canonical	3	40	junction_4	134.429758610213	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATGTGTGAAGTCCCTT	46917715	True	NA	14	True	ATTAAA	-14	NA	46923127	46966995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598_46938705_46966533
transcript_61007.known	chr17	+	2313	8	FSM	ENSG00000108433.17	ENST00000640358.1	2313	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	142.107317883065	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTTGATTTCTGTGATG	46917704	True	NA	1	True	ATTAAA	-1	NA	46923116	46966982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46963834_46965040_46966533
transcript_61008.known	chr17	+	1584	8	FSM	ENSG00000108433.17	ENST00000639365.1	1584	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	143.686876113815	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTATTTGATGTGGCCGA	46917725	True	NA	NA	False	NA	NA	NA	46923137	46966783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46964343_46965040_46966533
transcript_61011.known	chr17	+	1245	7	FSM	ENSG00000108433.17	ENST00000225567.9	1245	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	120.117188149277	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTACATGGACATTTACTT	46917707	True	NA	NA	False	TTTAAA	-36	NA	46923119	46941143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46940554
transcript_61013.nic	chr17	+	846	7	NIC	ENSG00000108433.17	novel	1273	9	NA	NA	17	0	combination_of_known_junctions	TRUE	canonical	3	5	junction_6	121.194976060158	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTTGCACTGGATCTC	NA	False	NA	NA	False	AATAAA	-17	NA	46923097	46952830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46952662
transcript_61014.known	chr17	+	1115	7	FSM	ENSG00000108433.17	ENST00000573224.2	1115	7	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_6	85.479854676734	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGTCCCTTGAAAG	46917715	True	NA	19	True	ATTAAA	-19	NA	46923127	46967000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533
transcript_61015.known	chr17	+	2137	7	FSM	ENSG00000108433.17	ENST00000639199.1	2137	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	161.880614445749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTGCTTATTTGATTA	46917717	True	NA	-21	True	NA	NA	NA	46923129	46966960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46938598_46938705_46963834_46965040_46966533
transcript_61021.known	chr17	+	2683	6	FSM	ENSG00000108433.17	ENST00000638374.1	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	122.724080766572	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATTGCAGAGGTGGTTTT	46917751	True	NA	-3	True	NA	NA	NA	46923163	46940779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_61026.known	chr17	+	1814	6	FSM	ENSG00000108433.17	ENST00000623037.2	1814	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	134.681847329178	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTAATACCAGGTATATT	46917707	True	NA	-42	True	NA	NA	NA	46923119	46939806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935226_46938598
transcript_61032.known	chr17	+	3574	6	FSM	ENSG00000108433.17	ENST00000638216.1	3574	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	119.25166665502	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGCTCTGTCACCCAGGC	46917733	True	NA	NA	False	TTTAAA	-42	NA	46923145	46941600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598
transcript_61040.known	chr17	+	885	5	FSM	ENSG00000108433.17	ENST00000639031.1	885	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	137.168691763099	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCTTTTGTATTTTAGT	46917785	True	NA	NA	False	NA	NA	NA	46923197	46935586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46935028
transcript_61042.known	chr17	+	3808	5	FSM	ENSG00000108433.17	ENST00000638892.1	3808	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	157.356879417457	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTTAGTCCAAAAAAGATT	46917725	True	NA	8	True	AATAAA	-20	NA	46923137	46942019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929523_46929585_46931098_46931208_46932066_46932200_46938598
transcript_61049.known	chr17	+	2190	5	FSM	ENSG00000108433.17	ENST00000640269.1	2190	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	133.306742140073	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTGATCTCTGATGGCA	46917747	True	NA	-6	True	AATACA	-8	NA	46923159	46936801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46935028
transcript_61051.known	chr17	+	788	5	FSM	ENSG00000108433.17	ENST00000393456.7	788	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	154.966931956466	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTCTCTCACTCTCGCTC	46917775	True	NA	28	True	AATGAA	-15	NA	46923187	46938997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923270_46929519_46929585_46931098_46931208_46932066_46932200_46938598
transcript_61053.known	chr17	+	1425	4	FSM	ENSG00000108433.17	ENST00000640007.1	1425	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	158.175711016438	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTCTTCCTGGTCAT	46917748	True	NA	4	True	AATAAA	-16	NA	46923160	46933262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931104_46931208_46932066
transcript_61058.known	chr17	+	2679	3	FSM	ENSG00000108433.17	ENST00000640709.1	2679	3	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTTTTTTTTTTTTTGGA	46917725	True	NA	NA	False	AAGAAA	-11	NA	46923137	46933628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46923222_46929519_46929585_46931098
transcript_61061.known	chr17	+	941	7	FSM	ENSG00000108433.17	ENST00000640723.1	941	7	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_6	126.83672794406	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTAAACACCCTGCAGGCC	46924139	False	NA	NA	False	NA	NA	NA	46929551	46975524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_46929585_46931098_46931208_46932066_46932200_46935028_46935170_46938598_46938705_46966533_46966627_46975198
transcript_61062.known	chr17	-	904	7	FSM	ENSG00000262879.6	ENST00000660600.1	904	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.05859855396197	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGAGGTTTTGCTTGTTT	-47067273	True	NA	NA	False	TATAAA	-22	NA	47067463	47005609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47005785_47007839_47007885_47021581_47021722_47033277_47033382_47054117_47054214_47056459_47056754_47067413
transcript_61068.known	chr17	-	370	3	FSM	ENSG00000262879.6	ENST00000572864.5	370	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	10	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCCTGAATGAACCCCCTC	-47098729	False	NA	NA	False	AATAAA	-17	NA	47099949	47071445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47071613_47072471_47072560_47099834
transcript_61069.known	chr17	-	372	3	FSM	ENSG00000262879.6	ENST00000576938.1	372	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAAAAATAAAATTCTAAG	-47098721	False	NA	NA	False	NA	NA	NA	47099941	47071473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47071651_47072471_47072560_47099834
transcript_61071.known	chr17	-	633	2	FSM	ENSG00000262879.6	ENST00000670987.1	633	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCATTTTGGATGTGTG	-47067309	True	NA	-6	True	NA	NA	NA	47067499	47056206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47056754_47067413
transcript_61073.known	chr17	-	836	2	FSM	ENSG00000262879.6	ENST00000574741.1	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAGAAATACTTCCTGCTC	-47099019	True	NA	NA	False	NA	NA	NA	47100239	47081919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47082351_47099834
transcript_61075.known	chr17	+	850	8	FSM	ENSG00000198336.9	ENST00000572316.5	850	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.728431359084683	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGCTCTGGGATTCTG	NA	False	NA	NA	False	AATAAA	-18	NA	47209034	47223658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47209092_47209388_47209558_47213798_47213827_47219903_47220054_47221681_47221856_47222379_47222458_47223013_47223058_47223508
transcript_61079.nic	chr17	+	1372	9	NIC	ENSG00000178852.16	novel	3957	25	NA	NA	-24	-12867	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	7.85712256490886	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACATCTCTTTTCCAA	47323195	True	NA	NA	False	AATAAA	-20	NA	47323930	47361771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_47324075_47324453_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47361377
transcript_61081.nic	chr17	+	1368	9	NIC	ENSG00000178852.16	novel	3957	25	NA	NA	-1	-12867	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	10.0863459686846	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACATCTCTTTTCCAA	47323224	True	NA	NA	False	AATAAA	-20	NA	47323959	47361771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_47324100_47324453_47324524_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47361377
transcript_61082.nnic	chr17	+	1303	8	NIC	ENSG00000178852.16	novel	3957	25	NA	NA	0	-12867	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	9.62140470884728	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTACATCTCTTTTCCAA	47323219	True	NA	NA	False	AATAAA	-20	NA	47323954	47361771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_47324100_47326225_47326388_47328268_47328384_47335195_47335357_47341920_47342033_47344161_47344293_47345015_47345099_47361377
transcript_61088.known	chr17	-	927	6	FSM	ENSG00000228782.8	ENST00000425159.7	927	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.1255816620134	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	ACACAAAACAAAAAAGAAAG	NA	False	NA	NA	False	NA	NA	NA	47492492	47450567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47450879_47456683_47456794_47482991_47483091_47490165_47490296_47491014_47491193_47492393
transcript_61093.known	chr17	-	473	4	FSM	ENSG00000228782.8	ENST00000573318.1	473	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_3	69.5333652924184	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTGAACTCCCTACCTT	-47491861	True	NA	NA	False	AAAAAG	-41	NA	47492459	47482991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47483091_47490165_47490296_47491014_47491193_47492393
transcript_61096.nnic	chr17	-	928	4	FSM	ENSG00000228782.8	ENST00000691039.1	736	4	-197	5	-197	-5	multi-exon	FALSE	canonical	3	31	junction_1	83.4159590379576	389	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTTCCTGCTTAGAACT	NA	False	NA	-5	True	AATAAA	-16	NA	47492689	47488631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47488956_47490165_47490296_47491014_47491193_47492393
transcript_61101.known	chr17	+	4309	23	FSM	ENSG00000141279.17	ENST00000322157.9	4309	23	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_7	54.5553778852126	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCCTGATTCACTTTATTC	NA	False	NA	24	True	AATAAA	-20	NA	47531107	47623276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47531556_47545908_47545994_47569416_47569495_47579389_47579512_47582741_47582850_47585499_47585701_47586147_47586245_47586364_47586399_47587229_47587345_47590716_47590882_47591955_47592061_47592484_47592546_47596352_47596463_47599675_47599740_47601607_47601748_47603914_47604050_47605332_47605553_47612459_47612603_47613668_47613726_47618349_47618458_47619008_47619165_47619736_47619785_47621767
transcript_61106.nnic	chr17	+	744	2	NNC	ENSG00000141279.17	novel	559	4	NA	NA	13	-44465	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAGGAAAGAAAG	47529484	False	NA	NA	False	NA	NA	NA	47531234	47532671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_47531556_47532248
transcript_61108.known	chr17	-	437	4	FSM	ENSG00000263766.6	ENST00000582389.5	437	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.65383665716478	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTTTGTATGTTTAAAAGG	-47649345	False	NA	NA	False	ATTAAA	-26	NA	47649402	47603859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47604119_47626546_47626628_47636511_47636602_47649395
transcript_61109.known	chr17	-	442	4	FSM	ENSG00000263766.6	ENST00000584391.6	786	4	29	315	-4	-315	multi-exon	FALSE	canonical	3	13	junction_2	3.39934634239519	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGCAGAATATTTTCACA	-47649363	False	41	NA	False	NA	NA	NA	47649420	47621841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47622088_47626546_47626628_47636511_47636602_47649395
transcript_61112.nnic	chr17	-	888	3	NIC	ENSG00000263766.6	novel	786	4	NA	NA	-184	-1	combination_of_known_splicesites	FALSE	canonical	3	18	junction_1	1.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCTTTCTTTTAGGCTAA	-47649576	False	NA	-18	True	AATAAA	-14	NA	47649633	47621527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47622088_47636511_47636602_47649395
transcript_61114.nnic	chr17	-	497	3	NNC	ENSG00000263766.6	novel	437	4	NA	NA	-184	-7990	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTGGAATTTCTCCTAAA	-47649576	False	NA	NA	False	AATAAA	-19	NA	47649633	47633995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_47634165_47636511_47636602_47649395
transcript_61115.nic	chr17	-	1057	2	ISM	ENSG00000263766.6	ENST00000580045.1	733	3	-217	9777	-184	-9777	5prime_fragment	FALSE	canonical	3	21	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCGCAGTGGCTCACGCC	-47649576	False	NA	NA	False	AAAAAG	-2	NA	47649633	47635782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_47636602_47649395
transcript_61117.known	chr17	+	6182	23	FSM	ENSG00000108424.11	ENST00000583648.6	6182	23	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	299.495747013775	2378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	47649398	True	NA	19	True	AATAAA	-24	NA	47649494	47685505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47649878_47650177_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_61121.known	chr17	+	6058	22	FSM	ENSG00000108424.11	ENST00000290158.9	6058	22	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_1	183.455951573669	2425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTTGCTGCTTTTTTTTT	47642119	True	NA	19	True	AATAAA	-24	NA	47649918	47685505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47650285_47650385_47650445_47652693_47652877_47656859_47657061_47658507_47658661_47661118_47661179_47663088_47663179_47664158_47664270_47665056_47665159_47668185_47668411_47669677_47669870_47670701_47670833_47673017_47673166_47673489_47673562_47674637_47674783_47676408_47676492_47677019_47677128_47678045_47678190_47678307_47678414_47680019_47680135_47680507_47680670_47682403
transcript_61123.known	chr17	-	1622	6	FSM	ENSG00000159111.13	ENST00000414011.1	1622	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	287.255565655393	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGCTTTATAATAAAATGAA	-47827323	True	NA	-50	True	NA	NA	NA	47831534	47823489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47829138_47829237_47831459
transcript_61125.known	chr17	-	1576	5	FSM	ENSG00000159111.13	ENST00000421763.5	1576	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	256.321453452496	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTACCCAGAAGTGGGTCC	-47827319	True	NA	NA	False	NA	NA	NA	47831530	47823582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831310
transcript_61127.known	chr17	-	1749	5	FSM	ENSG00000159111.13	ENST00000351111.7	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_4	51.7904431338447	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAACGTGTCTCTGGTGGT	-47827330	True	NA	-3	True	ATTAAA	-25	NA	47831541	47823271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47824459_47826636_47826782_47827039_47827205_47828500_47828671_47831459
transcript_61128.known	chr17	+	1885	8	FSM	ENSG00000141294.10	ENST00000269025.9	1885	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.699854212223765	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAAGCTGGCCGCTCAGA	47831653	True	NA	NA	False	AATAAA	-20	NA	47831669	47837719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47832000_47832099_47832206_47834424_47834534_47835352_47835400_47835665_47835776_47836032_47836103_47836332_47836476_47836749
transcript_61130.nic	chr17	-	1520	8	NIC	ENSG00000141295.14	novel	1496	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_7	107.78606929791	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838298	True	NA	-9	True	AATAAA	-15	NA	47841274	47837691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841184
transcript_61143.known	chr17	-	1496	8	FSM	ENSG00000141295.14	ENST00000290216.14	1496	8	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_7	41.3294380433559	704	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838297	True	NA	-9	True	AATAAA	-15	NA	47841273	47837691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_61144.known	chr17	-	1779	7	FSM	ENSG00000141295.14	ENST00000407215.7	1779	7	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_6	44.0898703407786	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCAGTGAACTTTATCCC	-47838313	True	NA	-9	True	AATAAA	-15	NA	47841289	47837691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669_47840844_47841207
transcript_61145.known	chr17	-	1745	7	FSM	ENSG00000141295.14	ENST00000584123.5	1745	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_1	25.0094426611674	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTGCTTTATTTTCTCTTC	-47838197	True	NA	-24	True	NA	NA	NA	47841173	47837706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838269_47838451_47838530_47838697_47838790_47839007_47839443_47839644_47840190_47840373_47840669
transcript_61146.known	chr17	-	932	5	FSM	ENSG00000141295.14	ENST00000584567.1	932	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	132.223295980701	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTTAATAAATGTGCT	-47836619	False	NA	-37	True	NA	NA	NA	47839595	47837719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47838003_47838335_47838451_47838530_47838697_47838790_47839007_47839443
transcript_61148.nnic	chr17	+	432	3	Antisense	novelGene_ENSG00000189120.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGGACTCTCAGTCTGT	47847982	True	NA	NA	False	AATAAA	-14	NA	47848032	47849677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_47848094_47848550_47848757_47849512
transcript_6115.known	chr1	-	6457	8	FSM	ENSG00000116209.12	ENST00000234831.10	6457	8	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_7	150.681174426438	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTATCTTGTAAAAGTGTC	-54042448	False	10756	-11	True	AATAAA	-28	NA	54053204	54026680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54052999
transcript_61153.known	chr17	-	522	3	FSM	ENSG00000264920.3	ENST00000691236.1	557	3	25	10	4	0	multi-exon	FALSE	canonical	3	27	junction_1	1.5	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTGGCATAACTGGTGC	-47895518	True	NA	NA	False	ATTAAA	-43	NA	47895812	47891228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47891582_47893899_47893959_47895702
transcript_61155.known	chr17	-	374	2	FSM	ENSG00000264920.3	ENST00000577279.2	470	2	47	49	23	-46	multi-exon	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAAAAAAAAAGCTTCA	-47895475	True	NA	NA	False	NA	NA	NA	47895769	47891274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47891582_47895702
transcript_61156.known	chr17	+	3026	7	FSM	ENSG00000167182.16	ENST00000376741.5	3026	7	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	18.8628087928483	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCAGTTCGGCTTCCTT	47894565	True	NA	12	True	AATAAA	-28	NA	47896235	47928957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47896294_47915311_47915389_47916155_47917131_47922961_47923275_47924918_47925094_47925347_47925542_47927723
transcript_61159.known	chr17	-	1225	3	FSM	ENSG00000234494.8	ENST00000451140.6	1225	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGCCCAAATCTTATAA	-47941334	False	NA	NA	False	CATAAA	-17	NA	47941410	47898273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47899304_47918451_47918572_47941335
transcript_6116.known	chr1	-	1116	8	FSM	ENSG00000116209.12	ENST00000371341.5	1116	8	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_7	220.906481275194	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGGATGTTTGGGATTGT	NA	False	NA	34	True	NA	NA	NA	54053504	54031965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54032306_54036609_54036719_54040755_54040838_54041723_54041806_54043372_54043526_54045691_54045787_54047266_54047373_54053355
transcript_61163.known	chr17	+	3417	7	FSM	ENSG00000108439.11	ENST00000642017.2	3417	7	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	9.7082439194738	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTTCAACCCGGCCTG	47940192	True	NA	22	True	AATAAA	-23	NA	47941570	47949308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47941814_47943305_47943431_47944615_47944716_47945558_47945613_47945860_47945990_47946322_47946394_47946613
transcript_61166.known	chr17	-	1524	2	FSM	ENSG00000167183.3	ENST00000300557.3	1524	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTCCTTTCAAGCTTCAG	-47957844	True	NA	NA	False	AGTAAA	-20	NA	47957883	47951966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_47953264_47957656
transcript_61167.known	chr17	+	1862	14	FSM	ENSG00000108465.15	ENST00000584991.5	1862	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	152.197473717264	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCGGACTTAATAAAAGAGG	47963679	True	NA	-4	True	NA	NA	NA	47971048	47981741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_61168.known	chr17	+	2759	12	FSM	ENSG00000108465.15	ENST00000584063.5	2759	12	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_1	64.3913653674489	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963734	True	NA	27	True	AATAAA	-17	NA	47971103	47981772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_61169.known	chr17	+	1834	14	FSM	ENSG00000108465.15	ENST00000338399.9	1834	14	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_7	93.568062118015	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACAGTTCCTTATGCTGC	47963743	True	NA	36	True	AATAAA	-26	NA	47971112	47981781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_6117.known	chr1	-	600	3	FSM	ENSG00000116209.12	ENST00000371337.3	600	3	0	0	0	0	multi-exon	FALSE	canonical	3	534	junction_2	110.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATCTTATTTTGTTTCTTC	-54042436	False	NA	NA	False	ATTAAA	-18	NA	54053192	54045485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54045787_54047266_54047373_54052999
transcript_61170.known	chr17	+	2609	13	FSM	ENSG00000108465.15	ENST00000580287.5	2609	13	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	139.174850058798	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTCAGTACTGACAGTTCC	47963757	True	NA	27	True	AATAAA	-17	NA	47971126	47981772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436_47981460_47981586
transcript_61171.known	chr17	+	578	2	FSM	ENSG00000108465.15	ENST00000578733.5	578	2	0	0	0	0	multi-exon	FALSE	canonical	3	568	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAAAAGCTACACACTAA	47963752	True	NA	NA	False	NA	NA	NA	47971121	47973810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971408_47973518
transcript_61172.known	chr17	+	2684	11	FSM	ENSG00000108465.15	ENST00000584168.5	2684	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	159.384472267533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCGGACTTAATAAAAGAGGA	47971348	False	NA	-3	True	NA	NA	NA	47971361	47981742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971408_47973518_47973651_47973930_47974036_47974399_47975338_47975513_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_61173.known	chr17	+	2519	13	FSM	ENSG00000108465.15	ENST00000585163.5	2519	13	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	85.905430885105	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGCTTCAGTACTGACAG	47963755	True	NA	23	True	AATAAA	-13	NA	47971124	47981768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978828_47978918_47980592_47980799_47981162_47981335_47981436
transcript_61174.known	chr17	+	867	9	FSM	ENSG00000108465.15	ENST00000579175.5	867	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_7	164.020911395468	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGAGGCTGCTGGAATCGA	47963753	True	NA	NA	False	NA	NA	NA	47971122	47976771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971153_47971361_47971408_47973518_47973651_47973930_47974032_47974399_47974449_47975158_47975338_47975513_47975639_47975868_47976014_47976711
transcript_61175.known	chr17	+	1768	13	FSM	ENSG00000108465.15	ENST00000580670.6	1768	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	188.918614899526	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAAAAACTCTTGCTTC	47971348	False	NA	12	True	AATAAA	-2	NA	47971361	47981757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_47971408_47973518_47973651_47973930_47974036_47974399_47974449_47975158_47975338_47975513_47975654_47975868_47976014_47976711_47976823_47977831_47977911_47978834_47978918_47980592_47980799_47981162_47981335_47981436
transcript_61176.nnic	chr17	-	615	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047868	True	NA	NA	False	AATAAA	-18	NA	48048050	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208_48047308_48047624
transcript_61179.nnic	chr17	-	658	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047889	True	NA	NA	False	AATAAA	-18	NA	48048071	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208_48047330_48047624
transcript_61180.nnic	chr17	-	589	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047909	True	NA	NA	False	AATAAA	-18	NA	48048091	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208_48047330_48047713
transcript_61181.nnic	chr17	-	536	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	8	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48048060	False	NA	NA	False	AATAAA	-18	NA	48048101	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208_48047330_48047776
transcript_61184.nnic	chr17	-	762	3	NNC	ENSG00000263412.2	novel	566	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047868	True	NA	NA	False	AATAAA	-18	NA	48048050	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208_48047455_48047624
transcript_61188.known	chr17	-	539	2	FSM	ENSG00000263412.2	ENST00000584428.2	566	2	25	2	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48047891	True	NA	NA	False	AATAAA	-18	NA	48048073	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48046971_48047624
transcript_61189.nnic	chr17	-	1489	2	NNC	ENSG00000263412.2	novel	566	2	NA	NA	-500	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGAGGACTAGAATTTTGT	-48048566	False	41	NA	False	AATAAA	-18	NA	48048607	48046880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48046971_48047208
transcript_6119.known	chr1	-	3276	18	FSM	ENSG00000157216.16	ENST00000610401.5	3276	18	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	38.9643613227164	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-54404214	True	NA	-11	True	ATTAAA	-19	NA	54406419	54225432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54258068_54258150_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_61191.known	chr17	+	4672	5	FSM	ENSG00000082641.16	ENST00000357480.9	4672	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	27.7342297531408	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTTAAGTGCACTTTTTC	48039506	True	NA	-10	True	AATAAA	-17	NA	48048369	48061479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057343_48057503_48058294
transcript_61195.nic	chr17	+	273	2	ISM	ENSG00000082641.16	ENST00000584137.5	529	3	-51	642	-21	-317	5prime_fragment	FALSE	canonical	3	161	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCAGCTGTTCCTGAGA	48039444	True	NA	22	True	AATAAA	-28	NA	48048307	48050724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_48048463_48050606
transcript_61196.known	chr17	+	4839	6	FSM	ENSG00000082641.16	ENST00000362042.8	4839	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	67.1553423042426	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGAGGACTGGCCATTGCGT	48039495	True	NA	7	True	AATAAA	-19	NA	48048358	48061545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48048463_48050606_48051629_48056385_48056599_48057031_48057122_48057343_48057503_48058294
transcript_61197.known	chr17	-	590	1	FSM	ENSG00000278765.1	ENST00000614061.1	590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACAGTTGGCCCTCCTTTGTG	-48066919	False	NA	-1	True	AATAAA	-24	NA	48067293	48066703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48066700_48067300
transcript_61200.known	chr17	-	2422	5	FSM	ENSG00000108468.15	ENST00000393408.7	2422	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	219.942606149877	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTCTTAAGTCTTACC	-48101181	False	NA	-1	True	AATAAA	-23	NA	48101198	48070051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48100754
transcript_61202.known	chr17	-	2182	5	FSM	ENSG00000108468.15	ENST00000225603.9	2182	5	0	0	0	0	multi-exon	FALSE	canonical	3	503	junction_3	46.9913555880228	2127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGATTTCTGTCTTAAG	-48068270	True	NA	-8	True	AATAAA	-16	NA	48101478	48070058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48071580_48075005_48075101_48076000_48076179_48076864_48077042_48101267
transcript_61213.nic	chr17	-	594	3	ISM	ENSG00000108468.15	ENST00000495350.5	550	4	-225	1081	-34	-918	5prime_fragment	FALSE	canonical	3	503	junction_1	61.5	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGGTAAGAATAGAAGT	-48101495	False	NA	NA	False	AAGAAA	-1	NA	48101512	48076006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_48076179_48076864_48077042_48101267
transcript_61217.known	chr17	-	578	5	FSM	ENSG00000108468.15	ENST00000402583.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	243.003472197415	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGGCTGACGTGGCATT	-48101285	False	NA	NA	False	NA	NA	NA	48101302	48071498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48071580_48075005_48075101_48075988_48076179_48076864_48077042_48101267
transcript_6122.known	chr1	-	2784	17	FSM	ENSG00000157216.16	ENST00000371319.8	2784	17	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_12	47.7229962910964	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTCCTGACATGTTTG	-54405995	False	NA	-11	True	ATTAAA	-19	NA	54406008	54225432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54227161_54228254_54228357_54228448_54228478_54228747_54228827_54239128_54239200_54240904_54240960_54241473_54241510_54242163_54242213_54243234_54243300_54251615_54251693_54251793_54251861_54257126_54257187_54281437_54281528_54401860_54401946_54404575_54404638_54404857_54404931_54405952
transcript_61221.known	chr17	+	2733	8	FSM	ENSG00000002919.15	ENST00000393405.6	2733	8	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_1	53.3731569007401	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGGCTGGTATTCATCC	48107539	False	NA	14	True	AATAAA	-24	NA	48107557	48123074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107839_48110707_48110768_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_61223.known	chr17	+	1200	7	FSM	ENSG00000002919.15	ENST00000580219.5	1200	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	51.4090350900393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTATCTCCTCAGGTGACC	48107530	False	NA	NA	False	NA	NA	NA	48107548	48121808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107597_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_61224.known	chr17	+	2992	7	FSM	ENSG00000002919.15	ENST00000359238.7	2992	7	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	24.3430345958209	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGCACCTCAGTTAATCTA	48107177	True	NA	NA	False	NA	NA	NA	48107765	48123601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107839_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_61225.known	chr17	+	1282	7	FSM	ENSG00000002919.15	ENST00000582104.5	1282	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	30.8436919536772	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTGGTTATGTTGTATCC	48107199	True	NA	NA	False	NA	NA	NA	48107787	48121887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48107839_48112030_48112112_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_61226.nnic	chr17	+	2203	7	NIC	ENSG00000002919.15	novel	922	8	NA	NA	52	-329	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	51.204383492909	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTGTTGTTGCAATTTGTG	48107808	False	NA	14	True	AATAAA	-15	NA	48107839	48122745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_48107980_48112030_48112086_48112573_48112661_48113300_48113402_48118703_48118800_48118973_48119187_48121234
transcript_61232.known	chr17	-	1556	13	FSM	ENSG00000141293.16	ENST00000336915.11	1556	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0.74535599249993	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGATGATGTTGAGCTC	-48430204	True	NA	-4	True	AATAAA	-23	NA	48430214	48133441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48133817_48137228_48137338_48162468_48162570_48170608_48170660_48180053_48180249_48182393_48182458_48184722_48184848_48187842_48187927_48189422_48189501_48345904_48346007_48363788_48363815_48396679_48396786_48430074
transcript_61233.known	chr17	+	701	2	FSM	ENSG00000264451.1	ENST00000579972.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTATTGCATCCTTGCCTTA	NA	False	NA	NA	False	AATAAA	-21	NA	48460369	48466040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48460477_48465446
transcript_61234.known	chr17	-	2034	2	FSM	ENSG00000120094.9	ENST00000239174.7	2034	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCTGCCTGCTTCTGTTTC	-48530983	True	NA	NA	False	AATAAA	-18	NA	48531011	48528525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48529876_48530327
transcript_61241.known	chr17	-	382	2	FSM	ENSG00000159182.5	ENST00000290294.5	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_1	0	5948	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGGTGAAAGTTAACTGTG	-48719941	True	NA	-13	True	AATAAA	-20	NA	48722518	48721718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48721900_48722317
transcript_61246.known	chr17	+	560	2	FSM	ENSG00000229637.4	ENST00000422730.4	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTGTTTGCTCTGAA	48722684	True	NA	15	True	AATAAA	-15	NA	48723184	48724758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48723314_48724327
transcript_61247.known	chr17	+	504	2	FSM	ENSG00000229637.4	ENST00000432056.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCACATCTTTTGTTTG	48723621	False	NA	8	True	AATAAA	-8	NA	48723691	48724751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48723772_48724327
transcript_61248.known	chr17	-	3039	2	FSM	ENSG00000159184.8	ENST00000290295.8	3039	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGTGGAATCTTAGAGATT	-48728503	True	NA	NA	False	AATAAA	-17	NA	48728750	48724762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48727044_48727992
transcript_6125.known	chr1	-	454	3	FSM	ENSG00000157216.16	ENST00000448572.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATATAACAAAATTTACCATT	-54413453	False	NA	NA	False	AGTAAA	-5	NA	54413466	54412707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54412878_54413080_54413254_54413355
transcript_61250.known	chr17	-	3573	16	FSM	ENSG00000170703.16	ENST00000393382.8	3573	16	0	0	0	0	multi-exon	FALSE	non_canonical	1	2	junction_3	3.83782345723313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGGAGGAGCCTGATTTGG	NA	False	NA	-1	True	AATAAA	-24	NA	48817229	48762233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48762974_48768988_48769255_48769727_48770098_48784922_48785202_48786163_48786336_48787810_48788000_48789930_48790107_48791377_48791604_48796060_48796147_48797060_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890_48803929_48804771_48804992_48816969
transcript_61251.nic	chr17	-	982	7	ISM	ENSG00000170703.16	ENST00000393382.8	3573	16	162	34752	10	144	5prime_fragment	FALSE	non_canonical	1	5	junction_2	4.54606056566195	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCTCAAGACATTGTGAG	-48816273	True	NA	NA	False	ATTAAA	-26	NA	48817067	48796985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_48797205_48799603_48799761_48801254_48801386_48801524_48801644_48803890_48803929_48804771_48804992_48816969
transcript_61258.known	chr17	+	3635	13	FSM	ENSG00000136436.15	ENST00000258947.8	3635	13	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_1	19.394300422776	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTCTTTTTTTTGAGACAG	48829272	True	NA	NA	False	AGTAAA	-5	NA	48831034	48865245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_61263.known	chr17	+	1438	12	FSM	ENSG00000136436.15	ENST00000416445.6	1438	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	37.7081002762839	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTTCTGCTGCCATCCTT	48829272	True	NA	113	True	NA	NA	NA	48831034	48863174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48851088_48851178_48851558_48851629_48852505_48852629_48852925_48853013_48856091_48856188_48860313_48860450_48862275_48862305_48862837
transcript_61266.nic	chr17	+	1226	9	ISM	ENSG00000136436.15	ENST00000258947.8	3635	13	-37	12010	-20	0	5prime_fragment	FALSE	canonical	3	74	junction_1	20.8086520466848	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCATGACAAGATGTAGTT	48829235	True	NA	NA	False	AATAAA	-19	NA	48830997	48853235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_48831079_48841697_48841888_48848063_48848167_48848321_48848456_48849251_48849378_48851088_48851178_48851558_48851629_48852505_48852629_48852925
transcript_61271.known	chr17	+	3084	7	FSM	ENSG00000159202.18	ENST00000360943.10	3084	7	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_3	18.0623918681884	134	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGAAGTGCCTGTGGGTG	48902465	True	NA	8	True	AATAAA	-17	NA	48908406	48929056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48908821_48910807_48910881_48912833_48913022_48916075_48916188_48921159_48921273_48922846_48922938_48926963
transcript_6128.known	chr1	-	2642	8	FSM	ENSG00000215883.11	ENST00000528287.5	2642	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	16.3682120998886	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGCTGTGTCACATT	-54198583	True	NA	NA	False	ACTAAA	-16	NA	54200036	54173217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54190737_54190897_54195418_54195716_54196368_54196492_54199975
transcript_61281.known	chr17	+	759	4	FSM	ENSG00000159199.14	ENST00000513781.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	2033.34224041765	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTAAACCCCTGTCTG	48880702	True	NA	28	True	ATTAAA	-8	NA	48892853	48895861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48893126_48894348_48894450_48895155_48895335_48895654
transcript_61292.known	chr17	+	598	5	FSM	ENSG00000159199.14	ENST00000355938.9	598	5	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	669.958720743301	26061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880613	True	NA	38	True	ATTAAA	-18	NA	48892764	48895871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_61293.known	chr17	+	646	5	FSM	ENSG00000159199.14	ENST00000393366.7	646	5	0	0	0	0	multi-exon	FALSE	canonical	3	821	junction_1	1508.36523677125	11439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880635	True	NA	38	True	ATTAAA	-18	NA	48892786	48895871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892911_48893408_48893457_48894371_48894450_48895155_48895335_48895654
transcript_61294.known	chr17	+	539	5	FSM	ENSG00000159199.14	ENST00000503641.5	539	5	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	1674.62374505439	1014	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880645	True	NA	38	True	ATTAAA	-18	NA	48892796	48895871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895182_48895335_48895654
transcript_61295.known	chr17	+	468	4	FSM	ENSG00000159199.14	ENST00000506855.1	468	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	1674.41180385498	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCCTGTCTGTGCCTCTGTC	48880665	True	NA	38	True	ATTAAA	-18	NA	48892816	48895871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48895155_48895335_48895654
transcript_61296.known	chr17	+	359	4	FSM	ENSG00000159199.14	ENST00000514808.5	359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	754.729237688737	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGCATCTCCCACTGTA	48880650	True	NA	NA	False	NA	NA	NA	48892801	48895349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48893457_48894371_48894450_48895155
transcript_61297.known	chr17	+	2214	3	FSM	ENSG00000159199.14	ENST00000513347.1	2214	3	0	0	0	0	multi-exon	FALSE	canonical	3	2767	junction_1	701	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCCCTGTCTGTGCCTCT	48880615	True	NA	35	True	ATTAAA	-15	NA	48892766	48895868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48892841_48893408_48895335_48895654
transcript_613.known	SIRV6	-	276	1	FSM	SIRV6B	SIRV617	276	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4419	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGTCTACTTGGGCACCT	NA	False	NA	NA	False	NA	NA	NA	1820	1544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_-_1500_1800
transcript_61305.known	chr17	-	951	8	FSM	ENSG00000159210.10	ENST00000290330.7	951	8	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	518.534315869928	1278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTCTTTCTTCCCTCAT	-48934254	True	NA	29	True	AATAAA	-45	NA	48944810	48930373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48930613_48931642_48931715_48933204_48933347_48936169_48936243_48937019_48937125_48940923_48941063_48943924_48943976_48944680
transcript_61310.known	chr17	-	700	7	FSM	ENSG00000159210.10	ENST00000576353.5	700	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	604.348892059325	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGGAGGCCAGAGAAGCC	-48934269	True	NA	-101	True	NA	NA	NA	48944825	48930503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48930613_48931642_48931718_48933204_48933347_48936169_48936243_48937019_48937125_48943924_48943976_48944680
transcript_61319.known	chr17	-	445	4	FSM	ENSG00000159210.10	ENST00000510195.1	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	1414	junction_1	77.7988860245869	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGACTCTGGACTTCTCTG	-48934250	True	NA	NA	False	NA	NA	NA	48944806	48936995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_48937125_48940923_48941063_48943924_48943976_48944680
transcript_61320.nnic	chr17	-	459	4	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6579	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	0.816496580927726	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	48962017	48958553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960885_48960988_48961726_48961820_48961916
transcript_61321.nic	chr17	-	650	4	ISM	ENSG00000159224.4	ENST00000357424.2	716	6	3995	0	3995	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.24721912892465	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	48964601	48958553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_48958717_48960885_48960988_48961726_48961820_48964309
transcript_61322.nnic	chr17	-	371	3	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6925	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGGCATGTTTGTCTTTGT	NA	False	NA	-4	True	ATTAAA	-19	NA	48961671	48958553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960885_48960988_48961565
transcript_61324.nnic	chr17	-	1188	2	NNC	ENSG00000159224.4	novel	716	6	NA	NA	6925	-41	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCATTGTGAAAATTTATT	NA	False	NA	-45	True	AATAAA	-17	NA	48961671	48958594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48958717_48960605
transcript_61331.nnic	chr17	-	578	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	399	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	17	78	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	-48996724	True	NA	-12	True	ATTAAA	-16	NA	48997093	48995265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48995583_48996417_48996492_48996906
transcript_61332.nnic	chr17	-	525	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	440	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	13	108	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	-48996683	True	NA	-12	True	ATTAAA	-16	NA	48997052	48995265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48995583_48996417_48996492_48996918
transcript_61333.nnic	chr17	-	494	3	NNC	ENSG00000250838.1	novel	428	3	NA	NA	325	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	13.5	116	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGTTGAGTAGAAAGAGA	-48997114	False	NA	-12	True	ATTAAA	-16	NA	48997167	48995265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_48995583_48996417_48996492_48997064
transcript_61334.known	chr17	+	8796	15	FSM	ENSG00000159217.10	ENST00000290341.8	8796	15	0	0	0	0	multi-exon	FALSE	canonical	3	1007	junction_10	112.129230291277	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATGTCTGTGTCTCAGGGT	48989091	False	NA	23	True	AATAAA	-24	NA	48997384	49056145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_48997921_48999108_48999170_49025617_49025667_49026465_49026518_49031909_49031974_49038167_49038450_49039956_49040092_49041377_49041501_49042241_49042378_49043427_49043551_49043966_49044087_49044990_49045066_49045889_49046022_49046259_49046374_49049351
transcript_61336.known	chr17	+	1629	8	FSM	ENSG00000108798.9	ENST00000225941.6	1629	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	2.71052370871575	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTGTGTGTGTGGTGTG	49210557	True	NA	5	True	NA	NA	NA	49210706	49223225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49210842_49216530_49216699_49217738_49217916_49219539_49219626_49219857_49219954_49220168_49220327_49222090_49222226_49222551
transcript_61340.known	chr17	-	889	4	FSM	ENSG00000167083.7	ENST00000300406.6	889	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAATAAAGCATTTCCACG	-49209329	False	NA	NA	False	NA	NA	NA	49209385	49206388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49206883_49207338_49207445_49208844_49208955_49209206
transcript_61342.known	chr17	-	993	4	FSM	ENSG00000167083.7	ENST00000507680.6	993	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCATGATTTCTTTAA	-49210518	True	NA	NA	False	NA	NA	NA	49210574	49206236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49206883_49207338_49207445_49208844_49208955_49210443
transcript_6135.known	chr1	-	3339	7	FSM	ENSG00000215883.11	ENST00000421415.5	3339	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	12.6940493495531	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAACCTTATGTGGTGGT	-54198557	True	NA	NA	False	NA	NA	NA	54200010	54172335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54174823_54179148_54179353_54184160_54184266_54187651_54187740_54195418_54195716_54196368_54196492_54199975
transcript_61357.known	chr17	-	1908	8	FSM	ENSG00000167085.13	ENST00000614445.5	1908	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_7	1814.59125661164	3192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346757	True	NA	-23	True	AATAAA	-4	NA	49414884	49404071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414241_49414334_49414834
transcript_61368.known	chr17	-	1834	7	FSM	ENSG00000167085.13	ENST00000300408.8	1834	7	0	0	0	0	multi-exon	FALSE	canonical	3	3539	junction_6	341.85803583749	16002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCATGGGTTGGTTTTTTGT	-49346755	True	NA	-3	True	AATAAA	-24	NA	49414882	49404051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_61369.known	chr17	-	1885	7	FSM	ENSG00000167085.13	ENST00000617874.5	1885	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	1601.41926635927	2824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCCAGACCTTCCGGCTCA	-49346731	True	NA	-23	True	AATAAA	-4	NA	49414858	49404071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49405205_49406758_49406855_49409041_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414739
transcript_61370.known	chr17	+	963	2	FSM	ENSG00000250186.3	ENST00000506504.3	963	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	415	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAGCCTAAAAGAATGGA	NA	False	NA	NA	False	NA	NA	NA	49404080	49405197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49404623_49404776
transcript_61371.known	chr17	-	847	5	FSM	ENSG00000167085.13	ENST00000393345.8	847	5	0	0	0	0	multi-exon	FALSE	canonical	3	3539	junction_4	372.898779831739	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCTTGTTAACCCTGTTT	-49346731	True	NA	NA	False	ACTAAA	-36	NA	49414858	49408755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49409159_49409330_49409474_49411677_49411840_49413176_49413292_49414834
transcript_61372.known	chr17	-	2414	13	FSM	ENSG00000121067.19	ENST00000514121.6	2414	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	97.6152808506719	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCACCCCTTTTTCTAA	-49675260	True	NA	NA	False	NA	NA	NA	49678099	49599546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49675894_49676017_49677932
transcript_61377.known	chr17	-	1860	12	FSM	ENSG00000121067.19	ENST00000509079.6	1860	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	92.5262526962836	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAACAGAAGGGAAAAGGAA	-49675271	True	NA	-10	True	AAAAAG	-30	NA	49678110	49599989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49668026_49668079_49677932
transcript_61381.known	chr17	-	1707	11	FSM	ENSG00000121067.19	ENST00000513080.6	1707	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	87.5097708830277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGTGGTACTTCGGAGAC	-49675274	True	NA	-65	True	NA	NA	NA	49678113	49600092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49620620_49620671_49621945_49622068_49622732_49622877_49677932
transcript_61382.known	chr17	-	2965	11	FSM	ENSG00000121067.19	ENST00000347630.6	2965	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	77.3113187056074	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTGGTTCTGTCATTGACT	-49678152	False	NA	-2	True	AATAAA	-18	NA	49678163	49598885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49636758_49636810_49677932
transcript_61383.nic	chr17	-	1791	11	NIC	ENSG00000121067.19	novel	1860	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_9	87.1071179640332	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGGACATTGAGTTTTAA	-49675269	True	NA	22	True	AAAAAG	-14	NA	49678108	49600005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49668026_49668079_49677932
transcript_61384.known	chr17	-	2985	11	FSM	ENSG00000121067.19	ENST00000393328.6	2985	11	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_9	82.8505280610812	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675271	True	NA	0	True	AATAAA	-20	NA	49678110	49598883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49675894_49676017_49677932
transcript_61387.known	chr17	-	2850	10	FSM	ENSG00000121067.19	ENST00000504102.6	2850	10	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_9	26.7517162250883	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTTCTGTCATTGACTTG	-49675258	True	NA	0	True	AATAAA	-20	NA	49678097	49598883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49600523_49601864_49602008_49607249_49607373_49607873_49607930_49611279_49611458_49618980_49619109_49619233_49619386_49621945_49622068_49622732_49622877_49677932
transcript_61389.known	chr17	+	3588	16	FSM	ENSG00000136504.13	ENST00000675278.1	3588	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_12	279.047299853547	733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAAGTCTGTTTCATCTG	49781593	True	NA	18	True	AATAAA	-12	NA	49788647	49829090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823236_49825505_49825543_49825999_49826147_49826692_49826800_49827400
transcript_61390.known	chr17	+	9514	15	FSM	ENSG00000136504.13	ENST00000259021.9	9514	15	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_5	259.43526777072	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCAGTATGTTTCTTGACT	49781626	True	NA	NA	False	AATAAA	-14	NA	49788680	49835026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49809118_49809209_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_61391.known	chr17	+	3469	14	FSM	ENSG00000136504.13	ENST00000424009.6	3469	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	262.43910536288	788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTTTCATCTGGGGGCT	49781651	True	NA	24	True	AATAAA	-18	NA	49788705	49829096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49788850_49791885_49792034_49796749_49796927_49798318_49798559_49805362_49805446_49811475_49811575_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_61397.known	chr17	+	1289	9	FSM	ENSG00000136504.13	ENST00000512616.5	1289	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	227.403688404564	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGATTGGCAAGTACAGT	49802337	False	NA	-35	True	NA	NA	NA	49815389	49827584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49815613_49815802_49815914_49817819_49818012_49821336_49821427_49821649_49821791_49823201_49823296_49825999_49826147_49826692_49826800_49827400
transcript_614.known	SIRV6	-	189	1	FSM	SIRV6C	SIRV618	189	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	889	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTCTAGCTGTTTCTT	NA	False	NA	NA	False	NA	NA	NA	2547	2358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_-_2400_2500
transcript_6140.known	chr1	+	1179	5	FSM	ENSG00000116221.15	ENST00000336230.10	1179	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	708.875870657198	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTGTTTGGTATGAG	54180124	True	NA	21	True	AATAAA	-20	NA	54200166	54218381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54200590_54209947_54210132_54212500_54212659_54216140_54216345_54218171
transcript_61411.known	chr17	-	1615	9	FSM	ENSG00000121073.15	ENST00000240333.12	1615	9	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_7	70.9977992616673	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCTGTCTTTTTCTTAGG	-49707947	False	NA	-17	True	ATTAAA	-13	NA	49707964	49700942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706335_49706964_49707069_49707729
transcript_61412.known	chr17	-	1320	9	FSM	ENSG00000121073.15	ENST00000507773.6	1320	9	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_7	96.6187740555633	975	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATCAAGCAAAATCACA	-49708073	False	NA	-33	True	AATAAA	-2	NA	49708090	49701338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49701511_49702857_49703012_49703187_49703295_49704099_49704227_49705123_49705282_49705865_49705897_49706203_49706310_49706964_49707069_49707729
transcript_61413.known	chr17	-	529	3	FSM	ENSG00000121073.15	ENST00000508607.1	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	124.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATAGAACCATAGAACTT	-49704557	True	NA	NA	False	AAAAAG	-27	NA	49707920	49706075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_49706310_49706964_49707069_49707729
transcript_61414.known	chr17	+	2018	3	FSM	ENSG00000108813.11	ENST00000240306.5	2018	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCTGTGAGATGTGTT	49969155	True	NA	7	True	ATTAAA	-20	NA	49969189	49974959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_49969752_49973072_49973270_49973700
transcript_61415.known	chr17	+	3364	11	FSM	ENSG00000005882.12	ENST00000503176.6	3364	11	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_4	26.5648263687155	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTTGAATGGGCCCTGAG	50093477	True	NA	NA	False	NA	NA	NA	50095350	50112152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884_50106070_50106793_50106884_50107075_50107154_50108155_50108233_50108318_50108418_50108611_50108720_50109286_50109401_50109956
transcript_61418.known	chr17	+	865	4	FSM	ENSG00000005882.12	ENST00000505897.5	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	11.2644968324772	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATTTGTTGTTTAGAGTTT	50093513	True	NA	NA	False	TATAAA	-22	NA	50095386	50106368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50095554_50097422_50097565_50105370_50105443_50105884
transcript_61422.known	chr17	-	547	2	FSM	ENSG00000253730.1	ENST00000523083.1	547	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCTTCTAGTTGGGCTTT	-50161219	False	NA	2	True	AATAAA	-18	NA	50161276	50158332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50158624_50161020
transcript_61423.known	chr17	+	1229	10	FSM	ENSG00000108823.17	ENST00000504073.2	1229	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.59474445493415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTCTCCCGTCCTCACT	50166021	False	NA	16	True	AATAAA	-33	NA	50166040	50175914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50169091_50169105_50170142_50170352_50170639_50170667_50175256_50175450_50175711
transcript_61424.known	chr17	+	1429	10	FSM	ENSG00000108823.17	ENST00000262018.8	1429	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.59474445493415	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	50165985	True	NA	30	True	NA	NA	NA	50166004	50175928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50169091_50169255_50170142_50170352_50170639_50170667_50175256_50175450_50175711
transcript_61425.known	chr17	+	1090	9	FSM	ENSG00000108823.17	ENST00000513821.5	1090	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.53602571593056	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCCTGGAACCCAGGCTC	50165984	True	NA	NA	False	NA	NA	NA	50166003	50175797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50169091_50169255_50170639_50170667_50175256_50175450_50175711
transcript_61426.known	chr17	+	1057	8	FSM	ENSG00000108823.17	ENST00000344627.10	1057	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.57790871674104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCACTGGCTCTGTTTCCCT	50165985	True	NA	30	True	NA	NA	NA	50166004	50175928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50166078_50167367_50167488_50167581_50167737_50167946_50168020_50168373_50168573_50170639_50170667_50175256_50175450_50175711
transcript_61427.known	chr17	-	5914	51	FSM	ENSG00000108821.14	ENST00000225964.10	5914	51	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_46	28.4588193711545	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAATCCGCAGTGGCCTCC	-50197281	True	NA	-10	True	AATAAA	-21	NA	50201631	50184100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50185649_50185777_50186021_50186316_50186508_50186639_50186923_50187014_50187123_50187483_50187538_50187875_50187984_50188095_50188150_50188529_50188638_50188741_50188796_50188902_50189011_50189167_50189276_50189376_50189539_50189678_50189733_50189858_50189913_50190000_50190109_50190326_50190381_50190542_50190597_50190816_50190925_50191382_50191491_50191787_50191887_50191979_50192025_50192474_50192529_50192639_50192694_50192796_50192851_50192993_50193048_50193942_50194042_50194129_50194184_50194348_50194448_50194572_50194627_50194720_50194829_50195046_50195101_50195231_50195331_50195433_50195479_50195566_50195666_50195922_50195977_50196154_50196200_50196313_50196368_50196483_50196529_50196616_50196671_50197009_50197064_50197179_50197234_50197731_50197786_50197948_50198003_50198160_50198206_50198432_50198505_50199225_50199328_50199417_50199454_50199555_50199591_50199752_50199948_50201410
transcript_61438.known	chr17	+	1272	6	FSM	ENSG00000249406.3	ENST00000654981.1	1272	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.85472369909914	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCTAGATTTATAGAAAAGT	50208096	True	NA	NA	False	AATAAA	-24	NA	50208129	50215423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50208199_50209335_50209407_50213834_50213916_50214100_50214776_50214919_50214983_50215110
transcript_6144.nic	chr1	-	829	4	ISM	ENSG00000215883.11	ENST00000528287.5	2642	8	-2	17333	-2	0	5prime_fragment	FALSE	canonical	3	49	junction_3	2.62466929133727	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGCATTTACTATC	-54198585	True	NA	-3	True	AATAAA	-15	NA	54200038	54190550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_54190897_54195418_54195716_54196368_54196492_54199975
transcript_61442.known	chr17	+	2693	5	FSM	ENSG00000167105.8	ENST00000507382.2	2693	5	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_4	13.2098448136229	467	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCTGCAAAGCATCCATCAC	50273150	True	NA	NA	False	AATAAA	-19	NA	50274465	50281485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50274571_50277714_50277741_50278555_50278631_50278800_50278997_50279194
transcript_61445.nnic	chr17	+	493	3	NNC	ENSG00000015532.10	novel	2107	10	NA	NA	-21	-5596	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGCATTGGGAATAC	50341488	True	NA	NA	False	AATAAA	-18	NA	50346104	50348078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_50346276_50346815_50346935_50347875
transcript_61446.nnic	chr17	+	400	2	NNC	ENSG00000015532.10	novel	2107	10	NA	NA	-47	-5596	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTGTGCATTGGGAATAC	50341462	True	NA	NA	False	AATAAA	-18	NA	50346078	50348078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_50346276_50347875
transcript_6145.known	chr1	+	868	4	FSM	ENSG00000116221.15	ENST00000398219.2	868	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	763.65102559277	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTTCAGTTCATTTCCAG	54209882	True	NA	NA	False	TTTAAA	-23	NA	54209945	54220930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54210132_54212500_54212659_54216140_54216345_54220610
transcript_61459.known	chr17	-	732	4	FSM	ENSG00000108826.16	ENST00000507088.5	732	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	696.995616118845	1408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACTGCCTGGTGATCTGTT	-50372947	False	NA	-3	True	NA	NA	NA	50372960	50367856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50372870
transcript_6146.known	chr1	+	1483	7	FSM	ENSG00000116221.15	ENST00000360840.9	1483	7	0	0	0	0	multi-exon	FALSE	canonical	3	1581	junction_2	37.1468557066259	2809	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGTTTGGTATGAGGG	54180124	True	NA	23	True	AATAAA	-22	NA	54200166	54218383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54218171
transcript_61462.known	chr17	-	686	4	FSM	ENSG00000108826.16	ENST00000225969.9	686	4	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_3	91.3613095839201	13684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTGGATGGAACTGCCTG	-50362527	True	NA	-13	True	AATAAA	-38	NA	50373184	50367866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50373130
transcript_61463.known	chr17	-	636	3	FSM	ENSG00000108826.16	ENST00000508200.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	669	688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGATGGAACTGCCTGGT	-50359916	False	185	-11	True	AATAAA	-40	NA	50370573	50367864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368314_50370031_50370100_50370454
transcript_61464.known	chr17	-	742	5	FSM	ENSG00000108826.16	ENST00000503633.5	742	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	682.086688038991	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-50362539	True	NA	-14	True	AATAAA	-37	NA	50373196	50367867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368314_50368837_50368868_50370031_50370100_50370454_50370587_50373130
transcript_61465.known	chr17	-	2441	3	FSM	ENSG00000108826.16	ENST00000442592.3	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_2	40	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACCTGGATGGAACTGCCT	-50362550	True	NA	-14	True	AATAAA	-37	NA	50373207	50367867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50370100_50370454_50370587_50373130
transcript_61466.known	chr17	-	869	4	FSM	ENSG00000108826.16	ENST00000511860.1	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	653.314795655373	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGCATGCTATTTAGGGAC	-50360506	False	NA	-34	True	AATAAA	-17	NA	50371163	50367887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50368299_50370031_50370100_50370454_50370587_50370905
transcript_6147.known	chr1	+	1582	7	FSM	ENSG00000116221.15	ENST00000605337.5	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_6	595.281352713899	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAACATATATCGTACACA	54180153	True	NA	-3	True	AATAAA	-6	NA	54200195	54225464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54200590_54205017_54205202_54205294_54205411_54209945_54210132_54212500_54212659_54216140_54216345_54225124
transcript_61471.known	chr17	+	2330	9	FSM	ENSG00000154920.15	ENST00000338165.9	2330	9	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_5	19.4983973700404	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATGTGTAGTGATTCTGA	50371288	True	NA	42	True	AATAAA	-42	NA	50373228	50381483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50373278_50375184_50375984_50376065_50376194_50378594_50378682_50378773_50378896_50379106_50379225_50379451_50379568_50380311_50380502_50380762
transcript_61477.known	chr17	-	2880	7	FSM	ENSG00000108829.10	ENST00000225972.8	2880	7	0	0	0	0	multi-exon	FALSE	canonical	3	882	junction_1	56.4852488118211	1232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTTTGTTCCTTTGTGT	-50380134	True	NA	-6	True	ATTAAA	-17	NA	50397523	50381237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50383236_50385117_50385292_50388059_50388133_50392397_50392503_50392738_50392898_50394928_50394989_50397212
transcript_6148.known	chr1	+	6090	33	FSM	ENSG00000271723.5	ENST00000425300.6	6090	33	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	120.545338818793	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTAGCTGTGTGACTTCT	NA	False	NA	13	True	NA	NA	NA	54641786	54742308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54641969_54651843_54651984_54652852_54654158_54659114_54659190_54665166_54665241_54668853_54668938_54670496_54670577_54670799_54670930_54673090_54673187_54673700_54673806_54673999_54674152_54678741_54678855_54679262_54679440_54679890_54680046_54682655_54682795_54686257_54686449_54692423_54692562_54695375_54695491_54700320_54700462_54701142_54701323_54702089_54702246_54702622_54702746_54706434_54706538_54715522_54715611_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_61486.known	chr17	+	2177	16	FSM	ENSG00000167107.13	ENST00000300441.9	2177	16	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	9.78979060041634	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTTGCTGGTGGGCTCTCT	50425969	True	NA	9	True	CATAAA	-21	NA	50426217	50474837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50463817_50463910_50464217_50464295_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_61487.nic	chr17	+	2141	16	NIC	ENSG00000167107.13	novel	2177	16	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_8	13.8698714245422	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCTTCTTGCTGGTGGG	50425981	True	NA	3	True	CATAAA	-15	NA	50426229	50474831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419_50462586_50463155_50463252_50463394_50463553_50464217_50464295_50464525_50464600_50471027_50471136_50472427_50472580_50473664_50473807_50473893_50474005_50474198_50474268_50474501
transcript_61489.nic	chr17	+	1368	6	ISM	ENSG00000167107.13	ENST00000300441.9	2177	16	-63	11783	-3	13	5prime_fragment	FALSE	canonical	3	32	junction_5	6.18384993349612	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTCTCCTGATTCCCG	50425906	True	NA	17	True	AATATA	-27	NA	50426154	50463054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_50426390_50460676_50460873_50461241_50461371_50461632_50461687_50462183_50462303_50462419
transcript_61491.known	chr17	+	2467	9	FSM	ENSG00000136444.10	ENST00000258955.7	2467	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	13.0743068649929	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGACTGTGGTCCTCTCC	50477661	True	NA	12	True	AATAAA	-16	NA	50478859	50485974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50479020_50479628_50479763_50479879_50480085_50482090_50482457_50482642_50482707_50483339_50483488_50483705_50483761_50484441_50484546_50484743
transcript_61498.known	chr17	+	575	2	FSM	ENSG00000108846.16	ENST00000508929.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAAGGAAATGACACCAAA	NA	False	NA	NA	False	AATATA	-39	NA	50687308	50691244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50687731_50691091
transcript_61499.known	chr17	-	4166	5	FSM	ENSG00000154945.7	ENST00000285243.7	4166	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_2	26.7523363465698	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCCTATATGCCTTCATT	-50707569	False	NA	-9	True	ATTAAA	-18	NA	50707914	50693197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50696144_50696939_50697122_50699398_50699894_50700567_50700717_50707520
transcript_615.known	SIRV6	+	1969	1	FSM	SIRV6A	SIRV603	1969	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2403	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGGAAGATTTCGACCGAA	NA	False	NA	NA	False	ATTAAA	-26	NA	8999	10968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_9000_11000
transcript_61509.known	chr17	+	1972	11	FSM	ENSG00000108848.16	ENST00000240304.5	1972	11	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_10	72.1338339477391	2424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTAGTCCCCTGTTTTAAA	50704630	True	NA	11	True	AATAAA	-14	NA	50719602	50752709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750695_50752199
transcript_61510.known	chr17	+	6987	10	FSM	ENSG00000108848.16	ENST00000505658.6	6987	10	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	59.9526562185056	1399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGGTGTAGGTAGTTAC	50704630	True	NA	32	True	AATAAA	-26	NA	50719602	50756219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500
transcript_61511.known	chr17	+	2284	11	FSM	ENSG00000108848.16	ENST00000393227.6	2284	11	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_10	148.95301272549	1348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGCCTTGTTACACTCAAT	50704626	True	NA	NA	False	AATAAA	-13	NA	50719598	50751617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651_50744814_50745719_50746004_50746541_50746703_50750500_50750642_50750746
transcript_61512.known	chr17	+	533	4	FSM	ENSG00000108848.16	ENST00000508218.5	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_2	31.084115271666	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATTCAGAGACCTCCCTAA	50704624	True	NA	NA	False	NA	NA	NA	50719596	50741292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50740305_50740346_50741101
transcript_61513.known	chr17	+	840	7	FSM	ENSG00000108848.16	ENST00000504563.6	840	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	297.417588959063	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGGTCCACAACGTCGGT	50704626	True	NA	NA	False	ATTAAA	-17	NA	50719598	50743792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50740305_50740346_50741101_50741247_50741656_50741732_50743705
transcript_61514.known	chr17	+	1112	9	FSM	ENSG00000108848.16	ENST00000508045.5	1112	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	316.688505277662	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTTTTTTTGTTTGTTT	50704597	True	NA	22	True	ATTAAA	-22	NA	50719569	50744813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50719832_50736959_50737027_50737286_50737480_50738136_50738200_50740305_50740346_50741101_50741247_50741656_50741732_50743705_50743811_50744651
transcript_61515.known	chr17	+	783	5	FSM	ENSG00000108848.16	ENST00000503728.1	783	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	255.102920406647	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTACTTAGCCTTTGGATTT	50746568	True	NA	-38	True	NA	NA	NA	50746618	50752585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50746703_50750500_50750642_50750746_50750853_50751296_50751363_50752199
transcript_61516.known	chr17	-	832	4	FSM	ENSG00000167117.10	ENST00000450727.6	832	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCCAGGAATTAAAAAACTG	NA	False	NA	NA	False	AATAAA	-20	NA	50767518	50761029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_50761507_50763396_50763558_50766873_50767012_50767462
transcript_61517.known	chr17	+	1351	2	FSM	ENSG00000229980.5	ENST00000416263.3	1351	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTATTTGTTTGTTTT	NA	False	NA	21	True	TATAAA	-18	NA	50866678	50868307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_50867218_50867495
transcript_61519.known	chr17	-	1298	3	FSM	ENSG00000008294.22	ENST00000511987.5	1298	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	21	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGCTACATGTCAGGCTT	-51046580	True	NA	NA	False	NA	NA	NA	51046837	51030913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_51031723_51041500_51041652_51046499
transcript_61523.known	chr17	+	796	6	FSM	ENSG00000239672.8	ENST00000013034.3	796	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	1782.50190462731	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGGACCAGGCTGTAGGA	51104196	False	NA	NA	False	NA	NA	NA	51153664	51161898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153725_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_61534.known	chr17	+	850	5	FSM	ENSG00000243678.12	ENST00000514264.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	3226.25745834086	7828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51164784	False	NA	25	True	AATAAA	-17	NA	51165434	51171744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51165682_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_61535.known	chr17	+	692	5	FSM	ENSG00000243678.12	ENST00000513177.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	3214.20669644937	4585	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACTGTCTCCTTGTGCTTA	51165758	False	NA	24	True	AATAAA	-16	NA	51165814	51171743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51165905_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_6154.known	chr1	+	2356	10	FSM	ENSG00000243725.7	ENST00000371281.4	2356	10	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_8	26.7913750632135	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGACTAATTTGAGGCTGG	54713607	True	NA	25	True	AGTAAA	-26	NA	54715860	54742657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54733628_54733711_54737581_54737665_54741410
transcript_61550.known	chr17	+	890	5	FSM	ENSG00000239672.8	ENST00000393196.8	890	5	0	0	0	0	multi-exon	FALSE	canonical	3	3088	junction_1	409.403834862352	21037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACAGGCATTCTTTGCCTGC	51104090	True	NA	NA	False	TATAAA	-29	NA	51153558	51162168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_61551.known	chr17	+	986	6	FSM	ENSG00000239672.8	ENST00000336097.7	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	1740.53548082192	6970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGTTGCATTGCTTTTTT	51104107	True	NA	53	True	ATTAAA	-43	NA	51153575	51162061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51161727
transcript_61552.known	chr17	+	781	5	FSM	ENSG00000239672.8	ENST00000475573.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	1474.55575937297	2178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGATTCATTGAGTTGGTT	51104128	True	NA	27	True	ATTAAA	-17	NA	51153596	51162035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161097_51161273_51161727
transcript_61553.known	chr17	+	690	5	FSM	ENSG00000243678.12	ENST00000512737.6	690	5	0	0	0	0	multi-exon	FALSE	canonical	3	5160	junction_1	1058.96659531828	40622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081498	True	NA	25	True	AATAAA	-17	NA	51166410	51171744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_61554.known	chr17	+	1021	8	FSM	ENSG00000011052.21	ENST00000393193.6	1021	8	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	2640.41310929845	7974	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104121	True	NA	25	True	AATAAA	-17	NA	51153589	51171744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_61555.known	chr17	+	894	7	FSM	ENSG00000011052.21	ENST00000376392.10	894	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_4	2422.55656968694	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51104135	True	NA	25	True	AATAAA	-17	NA	51153603	51171744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51171486
transcript_61556.known	chr17	+	1193	9	FSM	ENSG00000011052.21	ENST00000555572.1	1193	9	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	3157.69411269917	3788	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACTGTCTCCTTGTGCTT	51104167	True	NA	23	True	AATAAA	-15	NA	51153635	51171742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51153663_51154224_51154445_51155650_51155781_51159979_51160082_51161159_51161273_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_61557.known	chr17	+	749	5	FSM	ENSG00000243678.12	ENST00000503064.5	749	5	0	0	0	0	multi-exon	TRUE	canonical	3	365	junction_1	3094.591037197	11125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081505	True	NA	25	True	AATAAA	-17	NA	51166417	51171744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51166564_51166826_51166957_51168241_51168344_51169936_51170050_51171486
transcript_61558.known	chr17	+	568	4	FSM	ENSG00000243678.12	ENST00000393183.7	568	4	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_3	2920.09604103853	1860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTCTCCTTGTGCTTAT	51081507	True	NA	25	True	AATAAA	-17	NA	51166419	51171744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51166498_51166826_51166957_51168241_51168344_51171486
transcript_61574.known	chr17	+	1876	14	FSM	ENSG00000011260.14	ENST00000225298.12	1876	14	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_4	60.1043471337864	1249	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAGTGTATCTGGTTCTTCC	51251578	True	NA	NA	False	AATAAA	-25	NA	51260545	51297933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_51260927_51263273_51263387_51266181_51266281_51268836_51268905_51273361_51273451_51275865_51275992_51277129_51277305_51280004_51280106_51280388_51280480_51285244_51285369_51288028_51288204_51293902_51294046_51296964_51297004_51297781
transcript_6158.nnic	chr1	+	1989	9	NIC	ENSG00000243725.7	novel	2356	10	NA	NA	-65	0	intron_retention	FALSE	canonical	3	27	junction_7	86.3487659147483	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTAGCTGTGTGACTTC	54713542	True	NA	12	True	NA	NA	NA	54715795	54742307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_54716020_54716599_54716718_54717491_54717654_54721162_54721241_54722674_54722800_54728345_54728433_54731485_54731701_54737581_54737665_54741410
transcript_61597.nnic	chr17	-	1119	4	NNC	ENSG00000285939.2	novel	1168	3	NA	NA	4364	29692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.88561808316413	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGTGAGAATTTTTTT	NA	False	NA	-11	True	AATAAA	-15	NA	54361270	54036256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_54036891_54066576_54066823_54217920_54218022_54361132
transcript_616.known	SIRV6	+	1088	9	FSM	SIRV6A	SIRV605	1088	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9760.22235834691	7555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAGAGCAATCAACTCAC	NA	False	NA	NA	False	NA	NA	NA	1130	11331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845_2027_2470_2621_2740_2829_3106_3165_10724_10819_11031
transcript_61603.nnic	chr17	-	939	3	NNC	ENSG00000285939.2	novel	1168	3	NA	NA	-15787	29692	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACAGTGAGAATTTTTTT	NA	False	NA	-11	True	AATAAA	-15	NA	54082612	54036256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_54036891_54066576_54066823_54082553
transcript_61609.known	chr17	+	2168	16	FSM	ENSG00000141198.16	ENST00000575882.6	2168	16	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_12	80.4601764850165	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATACTTTTTTTTTTTA	54896655	True	NA	NA	False	AATAAA	-16	NA	54900851	54961956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_61610.known	chr17	+	2228	16	FSM	ENSG00000141198.16	ENST00000445275.6	2228	16	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_12	119.020707815442	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAACAATTTAATACTTTTT	54896555	True	NA	NA	False	AATAAA	-9	NA	54900751	54961949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949550_54949624_54950044_54950127_54960565_54960628_54961234
transcript_61614.known	chr17	+	1521	16	FSM	ENSG00000141198.16	ENST00000572158.5	1521	16	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	121.850436556005	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGACAATACCTACCAAC	54896639	True	NA	NA	False	NA	NA	NA	54900835	54961314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912686_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_61621.known	chr17	+	1895	15	FSM	ENSG00000141198.16	ENST00000348161.8	1895	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	120.065883274686	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAGAATTATAAATTGTTA	54896609	True	NA	NA	False	ACTAAA	-44	NA	54900805	54961722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_61623.known	chr17	+	1522	14	FSM	ENSG00000141198.16	ENST00000536554.5	1522	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	118.343447632867	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAAAAATTACTTAGTCCT	54896656	True	NA	NA	False	NA	NA	NA	54900852	54961475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108_54937227_54938923_54939021_54947260_54947313_54949517_54949624_54950044_54950127_54960565_54960628_54961234
transcript_61627.known	chr17	+	1849	10	FSM	ENSG00000141198.16	ENST00000575333.5	1849	10	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_1	31.7260651495981	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGGTTTTCTTAGAACT	54896660	True	NA	9	True	AGTAAA	-20	NA	54900856	54938033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903707_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745_54915863_54930072_54930207_54936648_54936710_54937108
transcript_6163.known	chr1	+	549	3	FSM	ENSG00000243725.7	ENST00000486621.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	11	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATAGTTTACTCTGATTG	54713611	True	NA	NA	False	GGGGCT	-23	NA	54715864	54717767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_54716020_54716599_54716718_54717491
transcript_6164.known	chr1	-	2356	2	FSM	ENSG00000162396.6	ENST00000371279.4	2356	2	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGCCTTGCACATTAATTT	-54762682	True	NA	-5	True	AATAAA	-16	NA	54764523	54756897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54759191_54764460
transcript_6165.nic	chr1	+	954	4	ISM	ENSG00000162398.12	ENST00000371273.4	1690	10	7671	0	7671	0	3prime_fragment	FALSE	canonical	0	0	junction_3	1.69967317119759	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAGAGTGTAGCATGTAT	54813721	True	NA	NA	False	ATTAAA	-14	NA	54813733	54842252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_54813976_54814913_54815040_54816988_54817123_54841800
transcript_61658.known	chr17	+	2337	7	FSM	ENSG00000141198.16	ENST00000572405.5	2337	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	156.245533269488	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTACTTTAAACATATTT	54896637	True	NA	NA	False	AATAAA	-29	NA	54900833	54917452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54900924_54903712_54903793_54905488_54905568_54912665_54912816_54913747_54913874_54914638_54914744_54915745
transcript_61659.known	chr17	-	1054	5	FSM	ENSG00000166260.13	ENST00000572558.5	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	158.854493169063	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCAAAACCTGTGTCCTTGT	-54958258	True	NA	-14	True	AATAAA	-11	NA	54968654	54951908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54952113_54961118_54961313_54963305_54963432_54964696_54964853_54968280
transcript_6166.known	chr1	-	2027	10	FSM	ENSG00000116133.13	ENST00000436604.2	2027	10	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	695.931900315357	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGCGAGCTGTGCAACGT	-54836639	True	NA	NA	False	NA	NA	NA	54887195	54850875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54851246_54852202_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_61660.known	chr17	-	2663	5	FSM	ENSG00000166260.13	ENST00000576370.5	2663	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	135.368709456802	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGTCCTTGTGGAGAGT	-54958257	True	NA	-7	True	AATAAA	-18	NA	54968653	54951901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54952113_54961118_54962916_54963305_54963432_54964696_54964853_54968280
transcript_61661.known	chr17	-	3150	4	FSM	ENSG00000166260.13	ENST00000299335.8	3150	4	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	27.7168220079832	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTATTCTAGTTTATTT	-54958258	True	NA	NA	False	AGTAAA	-20	NA	54968654	54960421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54962916_54963305_54963432_54964696_54964853_54968280
transcript_61662.known	chr17	-	1108	3	FSM	ENSG00000166260.13	ENST00000571584.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_2	12	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGAACAAAGGCTTAATCCC	-54958307	True	NA	15	True	ATTAAA	-33	NA	54968703	54962902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_54963432_54964696_54964853_54968280
transcript_61667.known	chr17	+	15590	18	FSM	ENSG00000166263.13	ENST00000376352.6	15590	18	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	12.3965616396011	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATTGGTTTTTGTGTGAA	54966616	True	NA	8	True	AATAAA	-18	NA	54968764	55173632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55047088_55047155_55072899_55073077_55078077_55078195_55078685_55078736_55081049_55081184_55141309_55141368_55159796
transcript_6167.known	chr1	-	4233	9	FSM	ENSG00000116133.13	ENST00000371269.9	4233	9	0	0	0	0	multi-exon	FALSE	canonical	3	2014	junction_3	139.13010996905	825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTCGTTTCTTGCTTGG	-54836639	True	NA	-7	True	AATAAA	-19	NA	54887195	54849626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_54852387_54853433_54853613_54854036_54854235_54865302_54865447_54871349_54871614_54875092_54875212_54875941_54876048_54883617_54883774_54886888
transcript_61671.nic	chr17	+	2362	12	NIC	ENSG00000166263.13	novel	2229	11	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_11	13.1513755054728	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCAGTATGTGTGTATTT	54966571	True	NA	3	True	AATAAA	-16	NA	54968719	55044776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235_55043326_55043611
transcript_61673.nic	chr17	+	1247	11	ISM	ENSG00000166263.13	ENST00000434978.6	2807	17	-56	117551	-7	0	5prime_fragment	FALSE	canonical	3	27	junction_9	10.0876161703348	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAATCCTATATTGGA	54966571	True	NA	NA	False	AAAAAG	-6	NA	54968719	55043375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167_55034260_55043235
transcript_61674.nic	chr17	+	1258	10	ISM	ENSG00000166263.13	ENST00000434978.6	2807	17	-56	126516	-7	-8956	5prime_fragment	FALSE	canonical	3	27	junction_9	10.130018951148	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAGTTCATCCTGATAT	54966571	True	NA	NA	False	TATAAA	-24	NA	54968719	55034410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505_55007598_55031167_55031265_55034167
transcript_61678.nic	chr17	+	1142	8	ISM	ENSG00000166263.13	ENST00000434978.6	2807	17	-56	153105	-7	15969	5prime_fragment	FALSE	canonical	3	33	junction_6	9.16069688107508	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGCATTTGGATCAAATAG	54966571	True	NA	NA	False	AATAAA	-17	NA	54968719	55007821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54999344_54999452_54999631_54999843_55000807_55000884_55007505
transcript_61680.known	chr17	+	1174	5	FSM	ENSG00000166263.13	ENST00000464340.5	1174	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	23.2486558751253	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTATATAGCATGAGAAAGG	54966643	True	NA	NA	False	AATAAA	-19	NA	54968791	54991852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824_54990958_54991038
transcript_61682.known	chr17	+	456	4	FSM	ENSG00000166263.13	ENST00000461444.5	456	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	3.09120616516523	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAAAAAGACCCACCAG	54966578	True	NA	NA	False	NA	NA	NA	54968726	54990988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_54968816_54985613_54985692_54986141_54986267_54990824
transcript_61684.nic	chr17	+	387	3	ISM	ENSG00000166263.13	ENST00000461444.5	456	4	-7	4634	-7	-4634	5prime_fragment	FALSE	canonical	3	50	junction_1	3.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTCTAATGTGGTCTAGG	54966571	True	NA	NA	False	ATTAAA	-17	NA	54968719	54986354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_54968816_54985613_54985692_54986141
transcript_61685.known	chr17	-	2569	7	FSM	ENSG00000108960.9	ENST00000262065.8	2569	7	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.7039486250005	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTTCCACTGTCTCTAAA	-55419540	True	NA	-19	True	AATAAA	-14	NA	55421835	55392621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_55394535_55401468_55401539_55403766_55403869_55407745_55407821_55411256_55411418_55414150_55414233_55421669
transcript_61686.known	chr17	-	570	2	FSM	ENSG00000108960.9	ENST00000577038.1	570	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAACAAACCCTGTTCAATT	-55419502	False	NA	NA	False	AAAAAG	-9	NA	55421797	55420091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_55420534_55421669
transcript_61687.nnic	chr17	-	1701	3	NNC	ENSG00000166292.12	novel	1755	2	NA	NA	-2544	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTTGTTAATTATTTGCT	-55725475	True	NA	2	True	ATTAAA	-23	NA	55725568	55719626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_55721136_55722618_55722730_55725487
transcript_61693.known	chr17	+	2680	6	FSM	ENSG00000141179.14	ENST00000576183.5	2680	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	45.3854602268171	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTACTTGTCCTGTGTAC	55748285	True	NA	10	True	AATAAA	-11	NA	55751060	55777368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55775310
transcript_61696.known	chr17	+	1972	6	FSM	ENSG00000141179.14	ENST00000268896.10	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	23.0963200532033	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	55748275	True	NA	16	True	AATAAA	-17	NA	55751050	55777374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_61697.known	chr17	+	919	6	FSM	ENSG00000141179.14	ENST00000573500.5	919	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	53.1473423606487	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGGAGCTCGCATTCTA	55748318	True	NA	NA	False	AATAAA	-20	NA	55751093	55823090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751245_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55822760
transcript_617.known	SIRV6	+	485	4	FSM	SIRV6A	SIRV609	485	4	0	0	0	0	multi-exon	FALSE	canonical	3	17716	junction_3	6509.94062099562	15269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCACAAGTCAAGCCATTGC	NA	False	NA	NA	False	NA	NA	NA	1137	2120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_1187_1468_1535_1640_1736_1845
transcript_6170.nnic	chr1	+	847	3	NNC	ENSG00000143001.5	novel	1256	3	NA	NA	-3	0	at_least_one_novel_splicesite	TRUE	canonical	1	2	junction_1	4	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACGACTCTATGAGTTG	54980575	True	NA	1	True	AATAAA	-16	NA	54980624	54992288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_54980669_54986096_54986447_54991835
transcript_61703.known	chr17	+	1856	6	FSM	ENSG00000141179.14	ENST00000325214.10	1856	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	53.1804475347848	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCTGTGTACCACTTC	55751374	True	NA	16	True	AATAAA	-17	NA	55751399	55777374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751478_55767334_55767453_55771105_55771186_55773723_55773896_55774791_55774860_55776034
transcript_61705.known	chr17	+	2234	6	FSM	ENSG00000141179.14	ENST00000417982.6	2234	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	64.5650060017034	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGTCCTGTGTACCACTT	55748329	True	NA	15	True	AATAAA	-16	NA	55751104	55777373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_55751478_55767334_55767453_55771105_55771202_55773655_55773896_55774791_55774860_55776034
transcript_61708.known	chr17	+	1843	2	FSM	ENSG00000153933.10	ENST00000572810.1	1843	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGTATTGTTCTATTTCC	56833260	True	NA	NA	False	AATAAA	-13	NA	56834106	56836466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56834261_56834777
transcript_6171.known	chr1	+	3637	12	FSM	ENSG00000169174.11	ENST00000302118.5	3637	12	0	0	0	0	multi-exon	FALSE	canonical	3	236	junction_6	21.632543589434	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATAGACTTGACTG	55035316	True	NA	19	True	AATAAA	-22	NA	55039547	55064852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_55040045_55043842_55044035_55046522_55046647_55052277_55052412_55052649_55052792_55055992_55056190_55057330_55057515_55058035_55058210_55058498_55058648_55059485_55059664_55061374_55061557_55063368
transcript_61710.known	chr17	-	5745	9	FSM	ENSG00000121060.19	ENST00000316881.9	5745	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	10.5445483544816	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTGAGTTCTGTGATTTT	-56909443	True	NA	-6	True	AATAAA	-17	NA	56914049	56887908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_56892230_56895342_56895442_56895520_56895605_56895925_56895953_56899114_56899181_56901418_56901579_56904254_56904489_56908467_56908564_56913391
transcript_61711.known	chr17	+	348	1	FSM	ENSG00000274213.1	ENST00000619432.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	122	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCTTTTTTTCTTCTTCTT	56913942	True	NA	9	True	AATAAA	-20	NA	56914185	56914533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56914200_56914500
transcript_61714.known	chr17	-	2634	7	FSM	ENSG00000121058.5	ENST00000240316.5	2634	7	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_3	17.410884207555	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTCTACCGAGTTATCAT	-56960093	True	NA	-15	True	AATAAA	-17	NA	56961050	56938198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_56939155_56942034_56942124_56946441_56946512_56949386_56949435_56949680_56949768_56949888_56950997_56960774
transcript_61715.nic	chr17	-	634	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-40	12480	-40	234	5prime_fragment	FALSE	canonical	3	350	junction_1	0	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGAAATGTGAATATAAAA	-56960133	True	NA	NA	False	AAGAAA	-16	NA	56961090	56950678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_56950997_56960774
transcript_61716.nic	chr17	-	568	2	ISM	ENSG00000121058.5	ENST00000240316.5	2634	7	-40	12546	-40	168	5prime_fragment	FALSE	canonical	3	350	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAGCAACCTGTGGCACAG	-56960133	True	NA	NA	False	AAAACA	-11	NA	56961090	56950744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_56950997_56960774
transcript_61719.known	chr17	+	654	5	FSM	ENSG00000121064.13	ENST00000573789.1	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_2	15.1224171348366	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAAG	56987723	True	NA	NA	False	ACTAAA	-15	NA	56987751	56995875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_56987851_56988215_56988291_56991098_56991172_56994980_56995019_56995506
transcript_61721.known	chr17	-	713	3	FSM	ENSG00000263004.3	ENST00000576871.2	740	3	19	8	2	-2	multi-exon	FALSE	canonical	3	5	junction_1	4	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTCAGTTTGCAGTATT	-57084944	True	NA	-7	True	AATAAA	-16	NA	57085022	57078297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57078704_57079286_57079411_57084839
transcript_61724.known	chr17	+	1860	10	FSM	ENSG00000153944.12	ENST00000322684.7	1860	10	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_9	3.78430808131698	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAATTGGTTAGTTTCCTT	57256915	True	NA	NA	False	ATTAAA	-13	NA	57257012	57632900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57401378_57401472_57529675_57529725_57596867_57596951_57615969_57616085_57627228_57627304_57631790
transcript_61727.known	chr17	+	534	6	FSM	ENSG00000153944.12	ENST00000581523.5	534	6	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	4.99599839871872	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGTGTATGGGTGTGTGA	57256713	False	NA	15	True	AATAAA	-28	NA	57256742	57274489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57256805_57257097_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57274267
transcript_61729.known	chr17	+	472	5	FSM	ENSG00000153944.12	ENST00000579531.5	472	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	4.76969600708473	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAGGATTATGGGACTTAA	57256944	True	NA	-41	True	NA	NA	NA	57257041	57274433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_57257139_57257465_57257548_57258269_57258355_57262150_57262193_57274267
transcript_6173.known	chr1	-	10800	68	FSM	ENSG00000162402.14	ENST00000294383.7	10800	68	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_67	35.8372475114966	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGAGTCTTGCCGCCATT	-55209344	True	NA	-1	True	AATAAA	-16	NA	55215364	55066358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_55069108_55071813_55071925_55072316_55072404_55072785_55072862_55073827_55073907_55075456_55075524_55077234_55077301_55078537_55078652_55079537_55079660_55081321_55081425_55083271_55083365_55083771_55083889_55085941_55086039_55089626_55089741_55092022_55092127_55092820_55092917_55093936_55094088_55095254_55095397_55096497_55096623_55096951_55097173_55097597_55097718_55097942_55098085_55098475_55098559_55099770_55099870_55100838_55100965_55101583_55101704_55103875_55104021_55106145_55106264_55107238_55107431_55110184_55110247_55120595_55120757_55121435_55121507_55123446_55123603_55124468_55124629_55125319_55125549_55125662_55125759_55129476_55129575_55132544_55132701_55134069_55134164_55134327_55134414_55137514_55137689_55137805_55137905_55138607_55138719_55138943_55139011_55141615_55141732_55142741_55142796_55142978_55143120_55144126_55144204_55145997_55146110_55146928_55147061_55147648_55147799_55148462_55148571_55153869_55153918_55154118_55154281_55154370_55154467_55154670_55154779_55156947_55157052_55157255_55157371_55158877_55159037_55159610_55159686_55162198_55162265_55165884_55165951_55166567_55166604_55171555_55171679_55172376_55172521_55176375_55176444_55177966_55178133_55214789
transcript_61732.known	chr17	-	5609	5	FSM	ENSG00000181610.13	ENST00000313608.13	5609	5	0	0	0	0	multi-exon	FALSE	canonical	3	780	junction_4	64.5155020130821	4259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCAGCAGATTTCTTTTT	-57838020	True	NA	-6	True	AATAAA	-22	NA	57850044	57834780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57839936_57840925_57841053_57841182_57841261_57849239_57849411_57849966
transcript_61733.known	chr17	-	516	4	FSM	ENSG00000181610.13	ENST00000579380.1	516	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	422.868773971311	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAGTTATTTGTGGAAAC	-57838032	True	NA	NA	False	NA	NA	NA	57850056	57841003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57841053_57841182_57841261_57849239_57849411_57849838
transcript_61737.known	chr17	-	857	4	FSM	ENSG00000180891.13	ENST00000581391.5	857	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	3.29983164553722	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTCCGTTCTCTATCTCTC	-57868282	False	NA	-16	True	NA	NA	NA	57868465	57862874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57863286_57866473_57866545_57867356_57867416_57868149
transcript_61738.known	chr17	-	4630	6	FSM	ENSG00000136451.9	ENST00000581208.2	4630	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	18.9272290629136	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTATGATGGATTGTTTAA	-57985189	True	NA	-5	True	ATTAAA	-17	NA	57988254	57971551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_57974901_57979151_57979314_57980602_57980787_57981872_57981937_57982698_57983394_57988078
transcript_6174.known	chr1	-	141	1	FSM	ENSG00000225475.1	ENST00000442812.1	141	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTTTTATACAAGAAAAAT	NA	False	NA	NA	False	NA	NA	NA	56619549	56619408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_56619400_56619500
transcript_6175.known	chr1	+	9355	9	FSM	ENSG00000162409.12	ENST00000371244.9	9355	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	6.06088896120033	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTCTGCTCCATCA	56643249	True	NA	22	True	ATTAAA	-25	NA	56645313	56715335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_56645482_56674380_56674523_56691393_56691488_56692357_56692503_56693764_56693853_56695934_56696160_56703970_56704476_56706091_56706219_56707474
transcript_61764.nic	chr17	-	1886	6	NIC	ENSG00000136450.13	novel	1317	5	NA	NA	-310	0	combination_of_known_junctions	FALSE	canonical	3	39	junction_2	702.161121111102	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	58007656	58003492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_58004002_58004922_58005042_58005413_58005601_58005800_58005974_58006342_58006528_58006943
transcript_61781.nnic	chr17	-	1699	5	NIC	ENSG00000136450.13	novel	1317	5	NA	NA	-310	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_2	740.304160463792	823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	58007656	58003492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_58004002_58004922_58005042_58005800_58005974_58006342_58006528_58006943
transcript_61786.nic	chr17	-	2258	5	NIC	ENSG00000136450.13	novel	1317	5	NA	NA	-310	0	intron_retention	FALSE	canonical	3	363	junction_1	556.003316087233	644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	NA	False	NA	-2	True	AATAAA	-18	NA	58007656	58003492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_58004002_58004922_58005601_58005800_58005974_58006342_58006528_58006943
transcript_61793.known	chr17	-	1317	5	FSM	ENSG00000136450.13	ENST00000584773.5	1317	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	690.719326137614	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATCCAACAAGATAGAGTAT	-57975892	True	NA	NA	False	NA	NA	NA	58007261	58004587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58005042_58005413_58005601_58005800_58005974_58006342_58006528_58006943
transcript_618.known	SIRV6	+	531	4	FSM	SIRV6A	SIRV616	531	4	0	0	0	0	multi-exon	FALSE	canonical	3	1100	junction_2	8524.62155562736	10165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTGAAAAAGTAATAGTGC	NA	False	NA	NA	False	NA	NA	NA	2285	10788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_2621_2740_2815_3106_3165_10724
transcript_61800.known	chr17	-	1720	4	FSM	ENSG00000136450.13	ENST00000581979.5	1720	4	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	640.901621849164	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCCAAAGATTTTTTTTT	-57975863	True	NA	NA	False	NA	NA	NA	58007232	58003806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58004002_58004922_58005974_58006342_58006528_58006943
transcript_61805.known	chr17	-	5343	4	FSM	ENSG00000136450.13	ENST00000258962.5	5343	4	0	0	0	0	multi-exon	FALSE	canonical	3	1335	junction_1	199.707007610872	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTGCCTTCATTTTGCAC	-57975877	True	NA	-10	True	ATTAAA	-19	NA	58007246	58000918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58005601_58005800_58005974_58006342_58006528_58006943
transcript_6181.nnic	chr1	-	747	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	832	1408	at_least_one_novel_splicesite	FALSE	canonical	1	8	junction_3	46.9112637504754	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57423203	False	NA	NA	False	AATAAA	-18	NA	57423225	57144008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423016
transcript_61810.known	chr17	-	3117	3	FSM	ENSG00000136450.13	ENST00000582730.6	3117	3	0	0	0	0	multi-exon	FALSE	canonical	3	1591	junction_2	116.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTAATGGTATTAGCCATCT	-57975892	True	NA	-8	True	ATTAAA	-17	NA	58007261	58003359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58005974_58006342_58006528_58006943
transcript_61811.known	chr17	-	438	2	FSM	ENSG00000136450.13	ENST00000581497.1	438	2	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGGTTGTCCTTTTTCC	-58004498	False	31369	-2	True	AATAAA	-18	NA	58005134	58003492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58003719_58004922
transcript_61812.nnic	chr17	+	583	3	NNC	ENSG00000264364.3	novel	6807	3	NA	NA	-556	-6092	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	16.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTTTAGTTGCCTGGG	NA	False	NA	3	True	AGTAAA	-15	NA	58082862	58089450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_58082996_58087081_58087223_58089141
transcript_61814.known	chr17	-	2343	18	FSM	ENSG00000011143.19	ENST00000393119.7	2343	18	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_3	20.5229216102066	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58206464_58206548_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_61815.known	chr17	-	1626	14	FSM	ENSG00000011143.19	ENST00000585134.2	1626	14	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_10	19.2698065321628	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCCAGGCATTGTGC	-58217779	True	NA	-12	True	AATAAA	-16	NA	58219255	58207565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_61816.known	chr17	-	1289	12	FSM	ENSG00000011143.19	ENST00000581761.6	1289	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	46.3235120494446	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTGTCTTTTTCTGAATG	-58217779	True	NA	NA	False	AATAAA	-29	NA	58219255	58208653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58208894_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_61817.known	chr17	-	2126	16	FSM	ENSG00000011143.19	ENST00000313863.11	2126	16	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	39.544854982103	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_61818.known	chr17	-	1467	15	FSM	ENSG00000011143.19	ENST00000580127.6	1467	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	42.0602701671139	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAGGCATTGTGCCATAC	-58217779	True	NA	-7	True	AATAAA	-21	NA	58219255	58207560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58207730_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_61819.known	chr17	-	2260	17	FSM	ENSG00000011143.19	ENST00000678463.1	2260	17	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	38.6316236230112	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGTTCTGTTGGCTGTT	-58217779	True	NA	-5	True	CATAAA	-16	NA	58219255	58205440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58206171_58206282_58206381_58207084_58207219_58207893_58208002_58208104_58208175_58208512_58208584_58210658_58210725_58210979_58211023_58212377_58212435_58212981_58213091_58213764_58213870_58214258_58214388_58214740_58214839_58216087_58216244_58216665_58216737_58218619_58218730_58219150
transcript_6182.nnic	chr1	-	691	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-22	1408	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_1	35.2230984819148	67	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57422501	True	NA	NA	False	AATAAA	-18	NA	57424082	57144008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57423929
transcript_61821.known	chr17	-	574	6	FSM	ENSG00000213246.7	ENST00000580947.1	574	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	237.366046434615	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCTCTGCTTATTT	NA	False	NA	-79	True	TATAAA	-42	NA	58353093	58346211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58346314_58347187_58347242_58347528_58347585_58351401_58351509_58352066_58352179_58352950
transcript_61828.known	chr17	-	1401	4	FSM	ENSG00000213246.7	ENST00000581166.5	1401	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	275.531405751786	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCCATTTTTCAATAC	-58340863	True	NA	-1	True	TATAAA	-24	NA	58352167	58345174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58346314_58347187_58347242_58351401_58351509_58352066
transcript_61829.known	chr17	-	539	3	FSM	ENSG00000213246.7	ENST00000581204.1	539	3	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_2	57.5	1195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACCTGCCTTGCCTCCCTC	-58347599	False	NA	-7	True	AATAAA	-32	NA	58347611	58345911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58346314_58347187_58347242_58347528
transcript_6183.nnic	chr1	-	617	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-212	1408	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_3	45.38232646698	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57424250	False	NA	NA	False	AATAAA	-18	NA	57424272	57144008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57424193
transcript_61830.known	chr17	-	5839	19	FSM	ENSG00000108389.10	ENST00000323456.9	5839	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	23.3595091272626	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTTTGTTGGGTCGTTT	-58517056	True	NA	-8	True	AATAAA	-15	NA	58517905	58489536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58491841_58492510_58492600_58492841_58492953_58494931_58496331_58503743_58503899_58504049_58504221_58504302_58504489_58504778_58504975_58505471_58505584_58506742_58506872_58507122_58507320_58508160_58508275_58508467_58508565_58508680_58508842_58511428_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_61832.nic	chr17	-	2406	5	ISM	ENSG00000108389.10	ENST00000582663.5	572	7	-25	1248	25	-1094	5prime_fragment	FALSE	canonical	3	16	junction_4	30.5655034311559	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATATATATATATTCCAA	-58517031	True	NA	NA	False	NA	NA	NA	58517880	58509415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_58511512_58512389_58512507_58512851_58512942_58516579_58516619_58517816
transcript_61837.nic	chr17	-	1078	6	ISM	ENSG00000121101.16	ENST00000240361.12	4911	33	125924	-2	-1841	0	3prime_fragment	FALSE	canonical	2	10	junction_2	3.3466401061363	115	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTGTGTAAGATATAT	NA	False	NA	-14	True	AATAAA	-22	NA	58566099	58556677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_58557048_58557798_58557851_58559452_58559563_58561519_58561613_58564868_58564969_58565746
transcript_61838.nic	chr17	-	829	5	NIC	ENSG00000121101.16	novel	4834	32	NA	NA	-1646	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	5.67340285895511	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTGCTGTGTAAGATAT	-58565886	False	NA	-16	True	AATAAA	-20	NA	58565904	58556679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_58557048_58559452_58559563_58561519_58561613_58564868_58564969_58565746
transcript_6184.nnic	chr1	-	631	4	NNC	ENSG00000173406.16	novel	722	3	NA	NA	-651	1408	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	49.4929849125667	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTTTCCTGTCTTGGGA	-57424689	False	NA	NA	False	AATAAA	-18	NA	57424711	57144008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_57144204_57145289_57145430_57290963_57291167_57424618
transcript_61841.known	chr17	-	164	1	FSM	ENSG00000200997.1	ENST00000364127.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTGGCTTGTTTATAAAA	-58679257	True	NA	NA	False	NA	NA	NA	58679690	58679526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58679500_58679700
transcript_61857.known	chr17	+	2562	9	FSM	ENSG00000108384.15	ENST00000337432.9	2562	9	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	10.8050913924872	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGTTTCAAAATCACCTA	58690445	True	NA	5	True	AATAAA	-19	NA	58692601	58735611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_61859.nic	chr17	+	1164	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_1	35	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690407	True	NA	10	True	AATAAA	-21	NA	58692563	58734331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_58692633_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_61860.nic	chr17	+	1214	9	NIC	ENSG00000108384.15	novel	2562	9	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	35.6431971068814	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCAGATCATATGAAGTGAA	58690410	True	NA	10	True	AATAAA	-21	NA	58692566	58734331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_58692686_58694930_58695190_58696692_58696860_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_61867.known	chr17	+	1098	8	FSM	ENSG00000108384.15	ENST00000482007.5	1098	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	44.438905550549	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAATCCAGATCATATGAAG	58690458	True	NA	6	True	AATAAA	-17	NA	58692614	58734327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930_58695190_58703195_58703330_58709858_58709991_58720745_58720813_58724039_58724101_58732483_58732545_58734117
transcript_61887.known	chr17	+	567	2	FSM	ENSG00000108384.15	ENST00000421782.3	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	0	1078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTTACTTCATTATCC	58690471	True	NA	7	True	ATTAAA	-18	NA	58692627	58695336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930
transcript_61889.nic	chr17	+	523	2	ISM	ENSG00000108384.15	ENST00000461271.5	726	5	-6	14577	-6	1	5prime_fragment	FALSE	canonical	3	17	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGTTACTTCATTAT	58690410	True	NA	5	True	ATTAAA	-16	NA	58692566	58695334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_58692686_58694930
transcript_6189.known	chr1	-	348	1	FSM	ENSG00000223416.3	ENST00000488067.1	348	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGCTGAGTTCTTAAAGAC	NA	False	NA	NA	False	NA	NA	NA	58056480	58056132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58056100_58056500
transcript_61892.known	chr17	+	1609	2	FSM	ENSG00000108384.15	ENST00000486827.1	1609	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGTGTTACTTCATTA	58690449	True	NA	4	True	ATTAAA	-15	NA	58692605	58695333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58693812_58694930
transcript_61894.known	chr17	+	1253	9	FSM	ENSG00000108384.15	ENST00000487525.5	1253	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.0250705360341	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAATCCAGATCATATGA	58690449	True	NA	4	True	AATAAA	-15	NA	58692605	58734325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58692789_58694930_58695190_58703195_58703330_58705877_58706023_58709858_58709991_58720745_58720813_58724039_58724101_58732480_58732545_58734117
transcript_61895.known	chr17	+	6560	7	FSM	ENSG00000175175.6	ENST00000308249.4	6560	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	3.85861230093008	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTCATTTGTCTTTTTAT	58755140	True	NA	13	True	AATAAA	-21	NA	58755853	58985179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_58756462_58955648_58955768_58965693_58965894_58969538_58969728_58972131_58972276_58972831_58972926_58979973
transcript_61896.known	chr17	-	4489	24	FSM	ENSG00000108395.14	ENST00000262294.12	4489	24	0	0	0	0	multi-exon	TRUE	canonical	3	252	junction_15	32.6202298441483	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTCTGCTGTTTATTA	-59099954	True	NA	-3	True	AATAAA	-16	NA	59106880	58998201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59104292_59104395_59106440
transcript_61897.known	chr17	-	3548	23	FSM	ENSG00000108395.14	ENST00000393065.6	3548	23	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_22	65.7575844854065	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTTGTGTTTAAATAATC	-59099900	True	NA	NA	False	NA	NA	NA	59106826	58998986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_58999460_59001597_59001715_59012327_59012447_59015609_59015800_59017295_59017425_59028414_59028724_59031895_59032091_59041812_59041899_59047682_59047820_59049177_59049394_59051213_59051329_59056874_59057055_59061031_59061109_59062566_59062649_59064354_59064406_59070822_59070948_59075646_59075715_59079753_59079878_59081096_59081220_59084001_59084090_59088290_59088408_59091299_59091341_59106440
transcript_61899.known	chr17	-	353	4	FSM	ENSG00000108395.14	ENST00000584889.3	353	4	0	0	0	0	multi-exon	FALSE	canonical	3	281	junction_2	36.5270067514739	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGGTAGTTGCCTTTTAG	-59106433	False	NA	NA	False	NA	NA	NA	59106468	59088225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59088408_59091299_59091341_59104292_59104395_59106440
transcript_619.known	SIRV6	+	1163	5	FSM	SIRV6A	SIRV610	1163	5	0	0	0	0	multi-exon	FALSE	canonical	3	14712	junction_1	3667.11217274574	8667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTAAAATGGGGTTTGCC	NA	False	NA	NA	False	ATTAAA	-5	NA	2472	11690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_10724_11109_11205
transcript_61912.known	chr17	-	570	4	FSM	ENSG00000182628.13	ENST00000583976.1	570	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	189.501685715164	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGGAAATTCTAACAGAGAA	-59143562	True	NA	NA	False	AAGAAA	-11	NA	59155177	59112261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59131280_59131368_59154955
transcript_61924.known	chr17	-	625	3	FSM	ENSG00000182628.13	ENST00000437036.6	625	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	112.5	457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATGTACACACGCATGCAC	-59143579	True	NA	NA	False	AATAAA	-42	NA	59155194	59112046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59131280_59131368_59154955
transcript_61927.known	chr17	-	689	3	FSM	ENSG00000182628.13	ENST00000578105.1	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	212.5	410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGGCTTTGTAAATTAAAGT	-59143569	True	NA	9	True	CATAAA	-34	NA	59155184	59111887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59155130
transcript_61936.known	chr17	+	1338	2	FSM	ENSG00000224738.2	ENST00000451775.2	1524	2	0	186	0	-186	multi-exon	FALSE	canonical	3	14	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAGAAAAAAAATCCTCT	59106567	False	NA	NA	False	NA	NA	NA	59106597	59118267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59107592_59117923
transcript_61940.known	chr17	-	689	2	FSM	ENSG00000182628.13	ENST00000580541.1	689	2	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	0	343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCTTTGTAAATTAAAGTAT	-59143569	True	NA	11	True	CATAAA	-36	NA	59155184	59111885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59154955
transcript_61941.known	chr17	-	533	2	FSM	ENSG00000182628.13	ENST00000583927.1	533	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTTCTGGTCTATCATA	-59143645	True	NA	-46	True	NA	NA	NA	59155260	59111942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59155130
transcript_61942.known	chr17	-	595	3	FSM	ENSG00000182628.13	ENST00000581068.5	595	3	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	156	1212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATGATAATATAGATGTT	-59143633	True	NA	-59	True	NA	NA	NA	59155248	59111955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59131280_59131368_59155130
transcript_61943.known	chr17	-	894	5	FSM	ENSG00000182628.13	ENST00000578519.5	894	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	255.54097029635	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGGCTTTGTAAATTAAA	-59143567	True	NA	7	True	CATAAA	-32	NA	59155182	59111889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119318_59119496_59124306_59124429_59131280_59131368_59155130
transcript_61944.known	chr17	-	583	4	FSM	ENSG00000182628.13	ENST00000583380.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	223.861564365123	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGTTCAGCCAAAAGGATC	-59143559	True	NA	NA	False	AATATA	-6	NA	59155174	59112090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59112346_59119298_59119496_59131280_59131368_59155130
transcript_61953.nnic	chr17	+	2068	11	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-235	121	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_10	16.2815846894582	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTGAGTATTTATAACAATA	59155479	False	NA	-15	True	AATAAA	-26	NA	59155496	59203973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201765_59203435
transcript_61961.known	chr17	+	6226	10	FSM	ENSG00000068489.13	ENST00000262293.9	6226	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_7	8.20568908339411	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCTTTTTAAACTAGAAA	59150313	True	NA	NA	False	AATAAA	-34	NA	59155745	59206709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562
transcript_61975.nnic	chr17	+	633	4	NNC	ENSG00000068489.13	novel	199	3	NA	NA	0	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	2.05480466765633	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAATGGGTAGTGA	59150313	True	NA	NA	False	NA	NA	NA	59155745	59203847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59163598_59163665_59169747_59169843_59203435
transcript_61978.known	chr17	+	3221	4	FSM	ENSG00000167447.13	ENST00000300917.10	3221	4	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	3.29983164553722	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAAAATACATGGATGATA	59208696	True	NA	-1	True	AATAAA	-23	NA	59210034	59215230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59211811_59212340_59212487_59212728_59213602_59214804
transcript_61985.nnic	chr17	+	1341	3	NNC	ENSG00000068489.13	novel	695	3	NA	NA	-235	648	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.5	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTTTTCTCTTTCTAAC	59155479	False	NA	8	True	AATAAA	-15	NA	59155496	59205353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169822_59204395
transcript_61989.nnic	chr17	+	816	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-235	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATTAAATGGGTAGTGA	59155479	False	NA	NA	False	NA	NA	NA	59155496	59203847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_61990.nnic	chr17	+	939	3	NNC	ENSG00000068489.13	novel	1641	11	NA	NA	-235	118	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	25.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTTGAGTATTTATAACA	59155479	False	NA	-18	True	AATAAA	-23	NA	59155496	59203970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59155806_59169747_59169843_59203435
transcript_61999.known	chr17	+	199	3	FSM	ENSG00000068489.13	ENST00000577457.1	199	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTCTCACTTTCAGTCC	59150312	True	NA	29	True	AAAAAG	-1	NA	59155744	59169819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59155806_59163598_59163665_59169747
transcript_62.known	ERCC-00130	+	1051	1	FSM	ERCC-00130A	EF011072	1051	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	48882	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00130_+_0_1100
transcript_620.known	SIRV6	+	459	5	FSM	SIRV6A	SIRV614	459	5	0	0	0	0	multi-exon	FALSE	canonical	3	3392	junction_3	8671.0982291749	12153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAAGACTGTATCGGAG	NA	False	NA	NA	False	AAAAAG	-17	NA	2516	10815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_2621_2740_2829_3106_3165_7805_7924_10724
transcript_6200.nic	chr1	-	1939	9	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_8	37.2323783822629	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545536	True	NA	1	True	AATAAA	-19	NA	58546765	58480718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546663
transcript_62000.known	chr17	+	2334	11	FSM	ENSG00000068489.13	ENST00000578542.5	2334	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_10	16.2815846894582	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGAAAGA	59150313	True	NA	NA	False	NA	NA	NA	59155745	59204705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59155806_59169747_59169881_59185053_59185205_59185439_59185563_59193491_59193735_59194756_59194856_59195330_59195444_59197543_59197604_59197692_59197790_59201562_59201758_59203645
transcript_62004.known	chr17	+	3241	10	FSM	ENSG00000153982.11	ENST00000284116.9	3241	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.62466929133727	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCATTCTTCATTCTTT	59219903	True	NA	NA	False	AATAAA	-17	NA	59220510	59275970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784_59272837_59273650
transcript_62006.nic	chr17	+	955	5	ISM	ENSG00000153982.11	ENST00000581276.5	1055	9	-51	15411	0	8382	5prime_fragment	FALSE	canonical	2	6	junction_1	1.22474487139159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAATTTACATATTGAT	59219903	True	NA	NA	False	AATAAA	-20	NA	59220510	59257610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121
transcript_62007.known	chr17	+	738	4	FSM	ENSG00000153982.11	ENST00000583543.1	738	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAATACAAAAAATATTA	59220074	False	NA	NA	False	NA	NA	NA	59220681	59249228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739
transcript_62009.known	chr17	+	1055	9	FSM	ENSG00000153982.11	ENST00000581276.5	1055	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	2.64279681398325	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGATTCCTCTTATGTAC	59219954	True	NA	NA	False	AATAAA	-18	NA	59220561	59273021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59220752_59234491_59234535_59245413_59245550_59248739_59248786_59257121_59257241_59257750_59257841_59267040_59267175_59270935_59270996_59272784
transcript_6201.known	chr1	-	1861	9	FSM	ENSG00000162600.12	ENST00000371226.8	1861	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	52.1019133525824	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545497	True	NA	1	True	AATAAA	-19	NA	58546726	58480718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58538794_58539311_58546702
transcript_62013.known	chr17	+	3575	18	FSM	ENSG00000108406.10	ENST00000251241.9	3575	18	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_5	22.7454699090628	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAGTATAATGTGTGTTTT	59562684	True	NA	15	True	AATAAA	-27	NA	59565609	59608345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59565784_59566626_59566795_59570517_59570664_59573115_59573236_59573739_59573968_59574187_59574255_59575339_59575472_59577265_59577366_59579471_59579559_59579696_59579880_59586152_59586234_59587895_59588054_59598736_59598852_59599374_59599484_59602521_59602617_59605114_59605185_59605445_59605675_59607032
transcript_62019.nnic	chr17	+	419	2	NNC	ENSG00000108406.10	novel	580	4	NA	NA	-21	-7424	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCATGTGTATACGTTG	59562663	True	NA	NA	False	AATAAA	-25	NA	59565588	59566332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_59565784_59566108
transcript_62020.known	chr17	+	814	5	FSM	ENSG00000108406.10	ENST00000580218.5	814	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	55.1106840821269	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTCAGTATCAAGTTAAAA	NA	False	NA	NA	False	AATGAA	-37	NA	59565557	59574259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59565784_59566626_59566795_59573115_59573236_59573739_59573968_59574187
transcript_62026.known	chr17	+	3686	12	FSM	ENSG00000062716.13	ENST00000262291.9	3686	12	0	0	0	0	multi-exon	TRUE	canonical	3	493	junction_5	52.3675819220597	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTGTATAAGTCTCATTTT	59701450	True	NA	5	True	AATAAA	-36	NA	59707653	59842255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59737452_59737544_59738836_59738948_59764970_59765139_59773753_59773886_59808795_59808877_59811669_59811787_59817711_59817774_59838294_59838398_59839767
transcript_6205.nnic	chr1	-	1421	8	NIC	ENSG00000162600.12	novel	1861	9	NA	NA	0	0	combination_of_known_splicesites	TRUE	canonical	0	0	junction_7	55.374052716825	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCTTCTACTTGCTTT	-58545573	True	NA	1	True	AATAAA	-19	NA	58546802	58480718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_58481175_58506059_58506210_58527260_58527336_58530600_58530730_58533952_58534061_58534157_58534332_58536512_58536742_58546702
transcript_62067.known	chr17	+	558	5	FSM	ENSG00000062716.13	ENST00000593168.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	256.768378115375	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCGCCTCTCAGGTGCTGA	59701444	True	NA	NA	False	NA	NA	NA	59707647	59773804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59707749_59731420_59731523_59735337_59735474_59764970_59765139_59773753
transcript_62069.known	chr17	+	587	3	FSM	ENSG00000062716.13	ENST00000588131.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	578	junction_2	19	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTTTATTTTCTCTCCTG	59701467	True	NA	NA	False	NA	NA	NA	59707670	59735744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59707749_59731420_59731523_59735337
transcript_62075.known	chr17	-	2246	3	FSM	ENSG00000141378.15	ENST00000409433.2	2246	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59707559	True	NA	-7	True	AATAAA	-17	NA	59707626	59697307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59697979_59698870_59700190_59707370
transcript_62076.known	chr17	-	1162	1	FSM	ENSG00000273702.1	ENST00000611877.1	1162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	248	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGCCTTTTATCTTT	-59619693	False	NA	-1	True	AATAAA	-16	NA	59619714	59618552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59618600_59619700
transcript_62077.known	chr17	+	5292	31	FSM	ENSG00000141367.12	ENST00000393043.5	5292	31	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	149.19726315631	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGCTCTCTACTGTCTGA	59619741	False	NA	NA	False	AATACA	-36	NA	59619857	59690826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59620174_59644275_59644484_59647397_59647667_59648239_59648402_59651202_59651317_59655853_59656028_59660390_59660589_59661442_59661644_59663841_59663995_59664786_59664910_59666102_59666241_59666479_59666645_59666796_59666978_59668776_59668941_59673646_59673773_59674700_59674844_59676953_59677189_59679396_59679520_59680911_59681058_59681294_59681479_59681646_59681840_59682270_59682429_59682628_59682794_59682906_59683015_59683094_59683263_59683386_59683537_59683624_59683757_59683874_59683986_59685055_59685227_59685586_59685809_59690635
transcript_62078.known	chr17	-	409	3	FSM	ENSG00000141378.15	ENST00000587935.1	409	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTATCGCTTT	-59700722	True	NA	NA	False	ATTAAA	-23	NA	59707415	59674635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59674822_59679366_59679545_59707370
transcript_62079.known	chr17	-	731	2	FSM	ENSG00000141378.15	ENST00000393038.3	731	2	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	0	6912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTGGCAGTTGTCATC	-59700737	True	NA	-7	True	AATAAA	-17	NA	59707430	59697307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59697979_59707370
transcript_62080.nic	chr17	-	2303	8	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_7	19.5656925901081	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891196	True	NA	16	True	AATAAA	-27	NA	59892966	59859478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59892696
transcript_62087.known	chr17	-	1027	6	FSM	ENSG00000108423.15	ENST00000539018.5	1027	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.4670313617852	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAATGGGAAAAGTATACC	-59891123	True	NA	NA	False	NA	NA	NA	59892893	59860316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59892696
transcript_62094.nic	chr17	-	1689	5	NIC	ENSG00000108423.15	novel	2491	9	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	29.3342802877453	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891196	True	NA	16	True	AATAAA	-27	NA	59892966	59859478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_59860425_59863663_59863848_59866608_59866750_59886082_59886231_59892696
transcript_621.known	SIRV6	+	377	4	FSM	SIRV6A	SIRV608	377	4	0	0	0	0	multi-exon	FALSE	canonical	3	21619	junction_1	2534.81482996731	14203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTTATTAGCCTGCCTA	NA	False	NA	NA	False	NA	NA	NA	3023	11270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_3165_10724_10819_11031_11109_11205
transcript_62101.known	chr17	-	2184	7	FSM	ENSG00000108423.15	ENST00000613721.4	2184	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30.6648550189518	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATAGGTAAATGTGTACTT	-59891175	True	NA	13	True	AATAAA	-45	NA	59892945	59859481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_62102.known	chr17	-	2491	9	FSM	ENSG00000108423.15	ENST00000325752.8	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	7.53325958665968	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAAATGTGTACTTAGT	-59891173	True	NA	16	True	AATAAA	-27	NA	59892943	59859478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59874538_59874704_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_62103.known	chr17	-	1769	8	FSM	ENSG00000108423.15	ENST00000340993.10	1769	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	19.6531142051122	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTCAAAGTTCCATTCT	-59891150	True	NA	NA	False	NA	NA	NA	59892920	59860012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59860425_59863663_59863848_59866608_59866750_59878102_59878335_59880893_59881111_59886082_59886231_59890830_59891042_59892696
transcript_62105.known	chr17	+	5428	15	FSM	ENSG00000108443.14	ENST00000225577.9	5428	15	0	0	0	0	multi-exon	TRUE	canonical	3	135	junction_10	11.4258925431742	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTCTGCTGAGAAACTG	59889926	True	NA	NA	False	AATAAA	-27	NA	59893120	59950574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59914634_59914704_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_62108.known	chr17	+	1913	14	FSM	ENSG00000108443.14	ENST00000443572.6	1913	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.1063741678398	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGGTTATCCTTTCATTAGG	59889935	True	NA	NA	False	NA	NA	NA	59893129	59947137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59893326_59910561_59910612_59912683_59912805_59926434_59926583_59930116_59930175_59931621_59931723_59934169_59934261_59934433_59934525_59935192_59935301_59936214_59936278_59936463_59936542_59940835_59940944_59945405_59945519_59946550
transcript_62111.known	chr17	-	2122	9	FSM	ENSG00000189050.16	ENST00000305783.13	2122	9	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_6	7	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCTGGCTTACTTGATGAT	-59964041	True	NA	NA	False	ATTAAA	-22	NA	59964740	59952239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59960067_59960169_59962539_59962617_59962826_59963285_59964607
transcript_62114.known	chr17	-	1893	8	FSM	ENSG00000189050.16	ENST00000482446.5	1893	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	14.0784971368628	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTCTCTGGACGTCATA	-59964035	True	NA	1	True	AATAAA	-14	NA	59964734	59952361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962539_59962617_59962826_59963285_59964607
transcript_62116.known	chr17	-	1809	7	FSM	ENSG00000189050.16	ENST00000466544.5	1809	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	17.1464281994822	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAGTAATAAGTGAAAATAA	-59964062	True	NA	-33	True	NA	NA	NA	59964761	59952395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59953112_59954044_59954147_59956487_59956554_59957223_59957383_59958290_59958445_59962826_59963285_59964607
transcript_62122.known	chr17	+	692	3	FSM	ENSG00000267302.5	ENST00000593015.5	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	0.5	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTGTGATCACTTGGTGC	NA	False	NA	NA	False	AATAAA	-23	NA	59964831	59973104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_59965189_59966402_59966468_59972834
transcript_62123.known	chr17	-	884	3	FSM	ENSG00000189050.16	ENST00000477207.2	884	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	1	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGTTACTGTTAAAGTAGT	-59964038	True	NA	NA	False	AAGAAA	-7	NA	59964737	59962320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_59962617_59962826_59963285_59964607
transcript_62126.known	chr17	-	553	3	FSM	ENSG00000068097.16	ENST00000591074.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATATTTTTCCCCTTTCCT	-60077858	True	NA	NA	False	AATAAA	-29	NA	60078921	60075614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60075834_60076129_60076238_60078695
transcript_62127.known	chr17	-	474	4	FSM	ENSG00000261040.8	ENST00000592556.6	475	4	0	1	0	-1	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCATACTATTTGAGTTAT	-60088300	False	NA	NA	False	AATAAA	-18	NA	60088315	60083566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60085931_60085986_60088196
transcript_62128.known	chr17	-	558	4	FSM	ENSG00000261040.8	ENST00000589987.6	670	4	112	0	-1	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTATTTGAGTTATT	-60088242	False	NA	NA	False	AATAAA	-19	NA	60088257	60083565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60085931_60086127_60088196
transcript_62129.known	chr17	-	447	3	FSM	ENSG00000261040.8	ENST00000566140.6	523	3	76	0	-7	0	multi-exon	FALSE	canonical	0	0	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCATACTATTTGAGTTATT	-60088278	False	NA	NA	False	AATAAA	-19	NA	60088293	60083565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085054_60085204_60088196
transcript_62130.known	chr17	-	567	3	FSM	ENSG00000261040.8	ENST00000587298.2	577	3	0	10	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCATACTATTTGA	NA	False	NA	NA	False	AATAAA	-13	NA	60088467	60083571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60088196
transcript_62131.known	chr17	+	699	2	FSM	ENSG00000267416.2	ENST00000589740.1	699	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACTCCTAAATCAAAAAAGC	60079289	False	NA	NA	False	ATTAAA	-27	NA	60079308	60088695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60079473_60088160
transcript_62132.known	chr17	-	561	4	FSM	ENSG00000261040.8	ENST00000590012.5	561	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCACTCATACTATTTGA	-60088298	True	NA	NA	False	AATAAA	-13	NA	60088313	60083571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60083767_60085102_60085204_60085931_60086080_60088196
transcript_62133.known	chr17	-	1622	5	FSM	ENSG00000267248.4	ENST00000668564.1	1622	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCAGACTTTGTTCTTGT	-60135411	True	NA	-5	True	AATAAA	-27	NA	60135713	60126532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60126866_60128540_60128660_60128955_60129091_60132435_60132513_60134755
transcript_62134.nnic	chr17	-	1491	4	NIC	ENSG00000267248.4	novel	1399	6	NA	NA	0	0	intron_retention	FALSE	canonical	1	1	junction_2	0.471404520791032	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCAGACTTTGTTCTT	-60135417	True	NA	-7	True	AATAAA	-25	NA	60135719	60126534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_60126866_60128540_60128660_60132435_60132513_60134755
transcript_62135.known	chr17	-	1361	3	FSM	ENSG00000267248.4	ENST00000658811.2	1374	3	12	1	-4	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGACTTTGTTCTTGTCA	-60135402	True	NA	-3	True	AATAAA	-29	NA	60135704	60126530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60126866_60132435_60132513_60134755
transcript_62137.known	chr17	+	1123	8	FSM	ENSG00000167434.10	ENST00000300900.9	1123	8	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_3	2.2314999074019	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	60149627	True	NA	8	True	ATTAAA	-24	NA	60149972	60159546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60150093_60155313_60155368_60156559_60156716_60157426_60157573_60157689_60157789_60158060_60158128_60158282_60158447_60159229
transcript_62139.known	chr17	+	677	4	FSM	ENSG00000167434.10	ENST00000590203.1	677	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	11.5566238822398	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTCTCAAGTGTGTTTTT	60157386	False	NA	8	True	ATTAAA	-24	NA	60157731	60159546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60157789_60157988_60158128_60158282_60158447_60159229
transcript_62140.nic	chr17	-	2244	16	ISM	ENSG00000170832.13	ENST00000300896.9	6937	34	-84	42244	13	0	5prime_fragment	FALSE	canonical	3	147	junction_8	11.6267889901822	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAGGTGAAAACTA	-60392207	False	NA	NA	False	NA	NA	NA	60392217	60219570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_62146.nic	chr17	-	1472	10	ISM	ENSG00000170832.13	ENST00000393003.7	1868	12	-242	5997	13	-5997	5prime_fragment	FALSE	canonical	3	147	junction_2	12.1928941054479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAGAACTACATTACTC	-60392207	False	NA	NA	False	ATTAAA	-7	NA	60392217	60255054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_62148.known	chr17	-	436	2	FSM	ENSG00000170832.13	ENST00000590297.1	436	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAAGGTCTGTTTTCTG	-60422316	False	NA	NA	False	AATAAA	-23	NA	60422337	60421207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60421552_60422245
transcript_62149.known	chr17	-	6937	34	FSM	ENSG00000170832.13	ENST00000300896.9	6937	34	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_17	30.7835239105697	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATGAACTGTATAAAAAGTA	-60388476	True	NA	-52	True	AATAAA	-21	NA	60392133	60177326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60179429_60180544_60180638_60181323_60181749_60183164_60183454_60185459_60185652_60190562_60190684_60192843_60192931_60198259_60198445_60205446_60205659_60207020_60207133_60208058_60208211_60208653_60208829_60209369_60209544_60211012_60211119_60211375_60211515_60212023_60212099_60213580_60213663_60214619_60214775_60219669_60219788_60222408_60222550_60223410_60223587_60226038_60226232_60236137_60236241_60252380_60252443_60255174_60255259_60265411_60265475_60265975_60266092_60269449_60269558_60271349_60271482_60288522_60288683_60294682_60294802_60301598_60301705_60345480_60345609_60391881
transcript_62151.known	chr17	-	2319	1	FSM	ENSG00000213228.5	ENST00000588627.1	2319	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2567	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	NA	False	NA	NA	False	AATAAA	-21	NA	60435996	60433677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60433700_60436000
transcript_62153.known	chr17	-	6492	13	FSM	ENSG00000062725.10	ENST00000083182.8	6492	13	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_12	8.30996724154527	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATAGTGTATCTGTTTCC	-60524456	False	NA	-20	True	AATAAA	-16	NA	60526242	60443157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_60447835_60451879_60452046_60454301_60454493_60456295_60456382_60460662_60460788_60461809_60461916_60461993_60462062_60464020_60464111_60466290_60466460_60479147_60479272_60494465_60494618_60500398_60500488_60525793
transcript_62157.nic	chr17	-	1814	3	ISM	ENSG00000062725.10	ENST00000585368.1	447	4	-120	-1131	-1	1131	intron_retention	FALSE	canonical	3	55	junction_2	8.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTTTGTTTTATT	NA	False	NA	NA	False	ATTAAA	-16	NA	60526243	60493342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60494618_60500398_60500488_60525793
transcript_62158.nic	chr17	-	921	2	ISM	ENSG00000062725.10	ENST00000585368.1	447	4	-120	5543	-1	-5543	intron_retention	FALSE	canonical	3	55	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGTATATTCACATTGTG	NA	False	NA	NA	False	NA	NA	NA	60526243	60500016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_60500488_60525793
transcript_62159.nic	chr17	+	466	2	ISM	ENSG00000259349.3	ENST00000559739.1	557	5	-29	23522	-8	0	5prime_fragment	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATAAATTCTTACTCTAT	60526038	True	NA	NA	False	AATAAA	-22	NA	60526263	60527244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_60526502_60527016
transcript_62160.known	chr17	+	932	1	FSM	ENSG00000259349.3	ENST00000661567.1	932	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCAGTCTATATAAATTC	60526078	True	NA	NA	False	AATAAA	-13	NA	60526303	60527235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60526300_60527200
transcript_62162.known	chr17	+	2948	16	FSM	ENSG00000141376.23	ENST00000588874.5	2948	16	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	12.9556508477532	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCTGAGTTGCTGGGGTA	60886722	True	NA	27	True	AATAAA	-21	NA	60887049	61392830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_60887212_60889694_60889772_60902619_60902704_60910531_60910703_60924406_60924501_60947218_60947353_60989970_60990236_61015750_61015902_61034665_61034791_61037888_61038055_61040791_61040893_61074919_61075021_61078332_61078530_61084466_61084565_61368326_61368495_61391976
transcript_62163.known	chr17	+	471	1	FSM	ENSG00000227694.1	ENST00000437246.1	471	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	331	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGCCTAAT	61069837	False	NA	-42	True	NA	NA	NA	61069870	61070341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_61069900_61070300
transcript_62164.known	chr17	-	247	2	FSM	ENSG00000267449.1	ENST00000593107.1	247	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTTTTTTTTTTTT	NA	False	NA	NA	False	NA	NA	NA	61070356	61069855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61070005_61070258
transcript_62165.known	chr17	-	799	1	FSM	ENSG00000253506.3	ENST00000521764.3	799	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7550	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAAATGCTCTCTTTT	NA	False	NA	NA	False	AATAAA	-29	NA	61591219	61590420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61590400_61591200
transcript_62167.known	chr17	-	2807	17	FSM	ENSG00000136492.10	ENST00000584322.2	2807	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	21.6498231805712	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTCCATTTTTGCCTAT	-61861164	False	NA	NA	False	AATAAA	-26	NA	61863327	61739056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61739411_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_62170.known	chr17	-	1628	7	FSM	ENSG00000136492.10	ENST00000682369.1	1628	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.4770639602164	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTGAGTTCTTACAAT	-61861207	False	NA	NA	False	AATAAA	-16	NA	61863370	61844935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61845820_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_62171.known	chr17	-	8182	20	FSM	ENSG00000136492.10	ENST00000259008.7	8182	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	16.0913252382281	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAATTCTTTAGGGCTGCT	-61861365	True	NA	NA	False	ATTAAA	-15	NA	61863528	61679138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61684141_61685835_61686166_61693429_61693513_61715950_61716064_61743012_61743135_61744431_61744592_61776400_61776563_61780260_61780402_61780839_61781006_61784269_61784425_61793596_61793730_61799099_61799300_61801252_61801475_61808466_61808758_61847100_61847221_61849128_61849257_61857057_61857232_61859795_61859908_61861446_61861570_61863283
transcript_62179.known	chr17	-	10461	30	FSM	ENSG00000108510.10	ENST00000397786.7	10461	30	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_29	13.6353914545533	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGTCTTATTCTGTT	-62063820	False	1458	1	True	AATAAA	-19	NA	62065278	61942604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_61946601_61946916_61947018_61950824_61950999_61952964_61953114_61955381_61955568_61955679_61955839_61956338_61956482_61960866_61961091_61961587_61961780_61962751_61962972_61965005_61965469_61966461_61966652_61968034_61968259_61972726_61972889_61982197_61983115_61984170_61984368_61984650_61984866_61984999_61985091_61987006_61987129_61992539_61992622_61995151_61995366_62010549_62011234_62029540_62029652_62029850_62030014_62031443_62031639_62033786_62033985_62035462_62035609_62052536_62052706_62063066_62063302_62065139
transcript_62180.known	chr17	+	444	2	FSM	ENSG00000239527.1	ENST00000466210.1	444	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTTTAATAGTGAAAACACT	NA	False	NA	NA	False	NA	NA	NA	62397396	62398142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62397745_62398046
transcript_62181.known	chr17	+	3150	8	FSM	ENSG00000087995.16	ENST00000616852.1	3150	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	127.256129317922	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAACAAAGATGCCTAGCT	62417459	True	NA	-66	True	NA	NA	NA	62423890	62450822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62424013_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_62182.nnic	chr17	+	676	5	NNC	ENSG00000087995.16	novel	1556	8	NA	NA	-9	0	at_least_one_novel_splicesite	TRUE	canonical	3	13	junction_1	154.127382382236	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	62417434	True	NA	-17	True	NA	NA	NA	62423865	62448914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_62424013_62440740_62440757_62444836_62444944_62447700_62447767_62448574
transcript_62186.known	chr17	+	1556	8	FSM	ENSG00000087995.16	ENST00000333483.14	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	35.4901538515708	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AATAATAAAAATAAAAAATA	62417443	True	NA	-17	True	NA	NA	NA	62423874	62448914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62424311_62426298_62426655_62427787_62427838_62435231_62435293_62440616_62440757_62444836_62444944_62447700_62447767_62448574
transcript_62188.known	chr17	+	3227	21	FSM	ENSG00000146872.19	ENST00000343388.11	3227	21	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	28.5234552605395	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTCCTCTTGGATTCTCTGA	62479127	False	NA	18	True	AATAAA	-18	NA	62479149	62613489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62479291_62481120_62481207_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_62189.known	chr17	+	5345	22	FSM	ENSG00000146872.19	ENST00000682203.1	5345	22	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	52.4394478576003	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAGAAGGATATTAAAAT	62479107	False	NA	-29	True	ATTAAA	-43	NA	62479129	62615444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_62479291_62481123_62481207_62508407_62508554_62520772_62520845_62522203_62522274_62523133_62523178_62536169_62536338_62552301_62552398_62553662_62553756_62560015_62560127_62565000_62565138_62573214_62573368_62576708_62576776_62578476_62578575_62580110_62580193_62586134_62586227_62596584_62596675_62600650_62600821_62602041_62602181_62606129_62606242_62608040_62608149_62612391
transcript_62192.known	chr17	-	447	1	FSM	ENSG00000239246.3	ENST00000460492.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTGGAGAGGATTCTTTTG	NA	False	NA	NA	False	NA	NA	NA	62516767	62516320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_62516300_62516800
transcript_62193.known	chr17	-	1154	1	FSM	ENSG00000274565.1	ENST00000611274.1	1154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTATTGTTTCCTATCTTG	-62627555	False	NA	NA	False	AATAAA	-14	NA	62627590	62626436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_62626400_62627600
transcript_62195.known	chr17	-	2377	6	FSM	ENSG00000173838.12	ENST00000580520.5	2377	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.74355957741627	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCGTTCATGTTTATTTC	NA	False	NA	NA	False	AGTAAA	-18	NA	62744514	62701313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_62701759_62711230_62711345_62722487_62722598_62724937_62725105_62735930_62737333_62744375
transcript_62196.nic	chr17	-	1218	5	NIC	ENSG00000173838.12	novel	559	4	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	1.58113883008419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCATTTGATTTCTTACC	NA	False	NA	-1	True	AATAAA	-18	NA	62808334	62749975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_62750537_62759834_62760007_62788479_62788600_62801645_62801753_62808076
transcript_62197.known	chr17	-	2929	6	FSM	ENSG00000008283.16	ENST00000360793.8	2929	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	31.5556651015313	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCGCCTGTTATCTTCC	-63444271	True	NA	-6	True	AATAAA	-14	NA	63446306	63432303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63434595_63435085_63435244_63435687_63435792_63436053_63436153_63437345_63437561_63446244
transcript_622.known	SIRV6	+	1311	6	FSM	SIRV6A	SIRV613	1311	6	0	0	0	0	multi-exon	FALSE	canonical	3	567	junction_2	11481.5370399612	9559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGAAGACCGGGAGTATAC	NA	False	NA	NA	False	NA	NA	NA	3105	11824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_3165_7104_7449_7805_7924_10724_10819_11031_11109_11205
transcript_6220.known	chr1	-	1820	1	FSM	ENSG00000184292.7	ENST00000371225.4	1820	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACCAGAAGTCGGCATTT	-58577168	False	NA	-6	True	AATAAA	-31	NA	58577252	58575432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58575400_58577300
transcript_62205.known	chr17	+	1367	8	FSM	ENSG00000136485.16	ENST00000431926.7	1627	8	260	0	0	0	multi-exon	FALSE	canonical	3	90	junction_7	84.3554191187139	1327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGTGACGAATTC	63543237	True	NA	26	True	AATAAA	-27	NA	63550481	63594279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999_63589238_63594202
transcript_62207.known	chr17	+	6324	7	FSM	ENSG00000136485.16	ENST00000614556.5	6324	7	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_3	26.2641496255934	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATTGACTGAATTTCTTT	63543232	True	NA	13	True	AATAAA	-14	NA	63550476	63594266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63550816_63578469_63578629_63579336_63579449_63579824_63579944_63583501_63583712_63585210_63585329_63588999
transcript_6221.known	chr1	-	7192	20	FSM	ENSG00000162601.11	ENST00000665648.1	7192	20	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_7	61.6279157525224	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTATCTGAGTTGTTTTTAT	-58689713	True	NA	NA	False	NA	NA	NA	58700072	58655397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668429_58668567_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_62220.known	chr17	+	1446	5	FSM	ENSG00000136463.9	ENST00000258975.7	1446	5	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	9.53939201416946	77	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGTTGTATGGCTCTTG	63596630	True	NA	11	True	NA	NA	NA	63600894	63608365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63601364_63604533_63604641_63606312_63606441_63607286_63607465_63607801
transcript_62224.known	chr17	+	3959	18	FSM	ENSG00000198231.14	ENST00000389924.7	3959	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	84.0007826623614	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63769081	True	NA	11	True	AGTAAA	-17	NA	63774169	63819317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63774377_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_62225.known	chr17	-	2195	14	FSM	ENSG00000108588.15	ENST00000403162.7	2195	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_13	254.412026622054	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTATGTCTACATTAAAC	-63755546	True	NA	-49	True	AATAAA	-17	NA	63773570	63746402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63772776_63772864_63773411
transcript_6223.known	chr1	-	7751	20	FSM	ENSG00000162601.11	ENST00000472487.6	7751	20	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_7	38.7825816915182	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATCATTTGGATTATTTC	-58689703	True	NA	-21	True	AATAAA	-15	NA	58700062	58654742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58660156_58661169_58661228_58661405_58661512_58665498_58665632_58667037_58667227_58667846_58667922_58668631_58668683_58668983_58669039_58671869_58671959_58673572_58673651_58675476_58675581_58676925_58677057_58681784_58682546_58685152_58685252_58689037_58689117_58690225_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_62231.known	chr17	-	2209	12	FSM	ENSG00000266173.7	ENST00000375840.9	2209	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_10	38.8174366545468	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCATTGTGTCTGCGT	-63739706	True	NA	-26	True	ATTAAA	-22	NA	63741874	63702834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728333_63728414_63741740
transcript_62232.known	chr17	-	2140	12	FSM	ENSG00000266173.7	ENST00000638702.1	2140	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_10	48.1857631318115	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAATGGCATTGTGTCTG	-63739664	True	NA	-29	True	ATTAAA	-19	NA	63741832	63702837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63726637_63726696_63728357_63728414_63741740
transcript_62234.known	chr17	-	2153	11	FSM	ENSG00000266173.7	ENST00000638708.1	2153	11	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_9	39.3330649708359	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	-63739692	True	NA	-10	True	ATTAAA	-38	NA	63741860	63702818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728333_63728414_63741740
transcript_62235.known	chr17	-	2130	11	FSM	ENSG00000266173.7	ENST00000639835.1	2130	11	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	37.8181173513437	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGTCAGCTCAGGGGCTACA	-63739693	True	NA	-10	True	ATTAAA	-38	NA	63741861	63702818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63728357_63728414_63741740
transcript_62240.known	chr17	+	4337	19	FSM	ENSG00000198231.14	ENST00000578681.5	4337	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	112.906057312165	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGATCGTTTGTCATT	63773286	False	NA	11	True	AGTAAA	-17	NA	63773862	63819317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63774377_63775107_63775179_63787033_63787271_63792411_63792563_63798037_63798100_63799588_63799626_63800467_63800618_63805070_63805176_63806534_63806655_63807723_63807901_63808819_63808949_63809559_63809660_63810512_63810561_63811075_63811174_63811931_63812209_63813227_63813455_63815562_63815674_63816867_63816967_63817693
transcript_62249.known	chr17	-	756	5	FSM	ENSG00000136490.9	ENST00000578061.5	756	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	477.537433087711	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGACCCCCTGGGAGGCCCC	-63699851	False	8309	NA	False	NA	NA	NA	63699861	63698288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63699802
transcript_62254.known	chr17	-	566	5	FSM	ENSG00000136490.9	ENST00000584645.1	566	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	492.102377559792	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCACAAGGAGCTCTGGGC	-63701162	False	NA	NA	False	NA	NA	NA	63701172	63698608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700983
transcript_62265.known	chr17	-	3192	5	FSM	ENSG00000136490.9	ENST00000259006.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	1005	junction_4	97.0988542671848	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCTGAGCCAGCATGTCC	-63691816	True	NA	-29	True	AATAAA	-24	NA	63700125	63695887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699070_63699256_63699349_63700031
transcript_62266.known	chr17	-	1298	5	FSM	ENSG00000136490.9	ENST00000583211.5	1298	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	475.378270433136	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTTTCAATAGATCCAGAT	-63691823	True	NA	-35	True	TTTAAA	-2	NA	63700132	63697832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63698712_63698798_63698939_63699027_63699114_63699256_63699349_63700031
transcript_62267.known	chr17	-	3283	13	FSM	ENSG00000108588.15	ENST00000225726.10	3283	13	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_7	42.1178901022673	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGAGTGCCGCCTTGAC	-63755573	True	NA	-6	True	ATTAAA	-14	NA	63773597	63745254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63746962_63751939_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_62268.known	chr17	-	1719	12	FSM	ENSG00000108588.15	ENST00000582252.1	1719	12	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_6	39.4978815207613	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCCGTGCCACACTGAGT	-63755546	True	NA	NA	False	AATAAA	-15	NA	63773570	63751769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63752108_63752319_63752430_63752740_63752800_63754432_63754519_63756239_63756351_63756468_63756571_63760913_63760980_63761229_63761352_63764015_63764191_63764739_63764848_63765911_63766195_63773411
transcript_62269.known	chr17	-	2166	13	FSM	ENSG00000266173.7	ENST00000336174.12	2166	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	59.7345982008938	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTGTGTCTGCGTCAG	-63739631	True	NA	-23	True	ATTAAA	-25	NA	63741799	63702831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63703752_63704004_63704048_63704340_63704583_63706634_63706740_63707246_63707419_63710490_63710615_63710727_63710837_63713405_63713528_63714005_63714109_63723297_63723327_63726637_63726696_63728333_63728414_63741740
transcript_62271.known	chr17	-	3551	21	FSM	ENSG00000108592.17	ENST00000427159.7	3551	21	0	0	0	0	multi-exon	FALSE	canonical	3	308	junction_20	50.4825464888609	588	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTGTCTTTTCTGACAGT	-63827649	False	20	-8	True	AATAAA	-16	NA	63827663	63819432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63819995_63820078_63820174_63820254_63820439_63820838_63820939_63821029_63821116_63821353_63821644_63821722_63821844_63821983_63822169_63823816_63823953_63824083_63824240_63824330_63824412_63824636_63824738_63824824_63824930_63825047_63825164_63825241_63825437_63825535_63825636_63826055_63826136_63826257_63826305_63826566_63826673_63826835_63826929_63827051
transcript_62280.known	chr17	+	1494	12	FSM	ENSG00000087191.13	ENST00000375812.8	1494	12	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_1	516.336971142485	2255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCAGTCTGTTAATGAGG	63827658	False	NA	36	True	AATAAA	-25	NA	63827683	63832026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827924_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_62291.known	chr17	+	1331	12	FSM	ENSG00000087191.13	ENST00000310144.11	1331	12	0	0	0	0	multi-exon	FALSE	canonical	3	1509	junction_7	196.823451535583	11192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGGACTCCAGTCTGTT	63810301	True	NA	29	True	AATAAA	-18	NA	63827430	63832019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_62292.known	chr17	+	804	8	FSM	ENSG00000087191.13	ENST00000584320.5	804	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	637.37955244701	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCGACTCCATCGGCTCCT	63810325	True	NA	NA	False	NA	NA	NA	63827454	63831105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827515_63828118_63828210_63829493_63829564_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035
transcript_62293.known	chr17	+	828	7	FSM	ENSG00000087191.13	ENST00000582130.5	828	7	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_4	620.347214603779	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGGCCACCAAGAACATC	63810323	True	NA	NA	False	NA	NA	NA	63827452	63831203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827515_63828137_63828210_63829493_63829564_63829851_63829950_63830270_63830502_63830808_63830936_63831035
transcript_62294.known	chr17	+	1178	11	FSM	ENSG00000087191.13	ENST00000585242.5	1178	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	588.695473058864	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATCTCTCCAATAAAGC	63810349	True	NA	-6	True	AAGAAA	-28	NA	63827478	63831984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63827515_63828137_63828210_63829851_63829950_63830132_63830190_63830270_63830502_63830808_63830936_63831035_63831227_63831326_63831426_63831505_63831617_63831723_63831811_63831915
transcript_62295.known	chr17	-	1800	13	FSM	ENSG00000108604.17	ENST00000225742.13	1800	13	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_12	239.746567580574	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCGAGGGTCAGAGCTGGC	-63840920	False	4355	NA	False	NA	NA	NA	63842466	63832603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63832992_63833068_63833171_63833297_63833421_63833586_63833723_63833908_63834007_63834166_63834329_63834473_63834576_63834704_63834801_63835411_63835568_63836921_63837045_63837194_63837238_63837440_63837626_63842380
transcript_62296.known	chr17	-	903	5	FSM	ENSG00000136487.18	ENST00000423893.7	903	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1.87082869338697	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTGACTAGGTGTCC	-63881918	True	NA	-3	True	AATAAA	-15	NA	63881944	63880214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63880519_63880771_63880937_63881028_63881149_63881358_63881520_63881791
transcript_62297.known	chr17	-	794	5	FSM	ENSG00000136487.18	ENST00000456543.6	794	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.56195171219375	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTTGTTTGACTAGGTG	-63881816	False	NA	-6	True	AATAAA	-12	NA	63881842	63880217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63880519_63880775_63880937_63881028_63881149_63881358_63881520_63881791
transcript_62299.known	chr17	-	1138	4	FSM	ENSG00000136487.18	ENST00000332800.7	1138	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCATCATTTTGTTTGAC	-63881909	False	NA	-12	True	AATAAA	-6	NA	63881935	63880223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63880937_63881028_63881149_63881358_63881520_63881791
transcript_623.known	SIRV6	+	783	3	FSM	SIRV6A	SIRV615	783	3	0	0	0	0	multi-exon	FALSE	canonical	3	22297	junction_2	2503	10848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAAGAGCAATCAACTCA	NA	False	NA	NA	False	NA	NA	NA	10237	11330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6_+_10819_11031_11109_11205
transcript_62300.known	chr17	-	1246	6	FSM	ENSG00000007312.13	ENST00000006750.8	1246	6	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_5	6.93974062915899	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63932237	True	NA	-3	True	AATAAA	-21	NA	63932331	63928739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931386_63932194
transcript_62301.known	chr17	-	1254	6	FSM	ENSG00000007312.13	ENST00000392795.7	1254	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	4.81663783151692	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	-63932242	True	NA	-3	True	AATAAA	-21	NA	63932336	63928739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073_63930386_63931334_63931389_63932194
transcript_62302.known	chr17	-	823	5	FSM	ENSG00000259384.7	ENST00000323322.10	823	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTCTGACTAGGTGTCC	NA	False	NA	NA	False	AATAAA	-15	NA	63918839	63917202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63917507_63917759_63917925_63918016_63918137_63918345_63918507_63918766
transcript_62303.known	chr17	-	378	5	FSM	ENSG00000007312.13	ENST00000349817.2	378	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	8.7571399440685	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCAGGTCGCCCCATGAC	-63932167	False	NA	NA	False	NA	NA	NA	63932261	63929225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63931334_63931386_63932194
transcript_62304.nic	chr17	-	997	5	NIC	ENSG00000007312.13	novel	1254	6	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_3	7.66077672302228	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACAGGCTCGTGGCATCT	NA	False	NA	-3	True	AATAAA	-21	NA	63932391	63928739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_63929325_63929433_63929476_63929769_63929889_63931334_63931389_63932194
transcript_62305.known	chr17	-	1159	4	FSM	ENSG00000007312.13	ENST00000559358.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	2.82842712474619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAATAAACGGTGTGTCCTG	-63930420	False	NA	-31	True	NA	NA	NA	63930514	63928767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63929325_63929433_63929476_63929769_63929889_63930073
transcript_62307.nic	chr17	-	1409	3	ISM	ENSG00000007314.12	ENST00000435607.3	7805	24	11215	18241	-10	2578	internal_fragment	FALSE	canonical	3	7	junction_1	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGACCCACATTCCAGTC	NA	False	NA	NA	False	AGTAAA	-20	NA	63961703	63956794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_63957519_63959264_63959439_63961192
transcript_62308.known	chr17	-	567	2	FSM	ENSG00000007314.12	ENST00000581514.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCAGCAGGGTTGGAATAT	-63961573	True	NA	NA	False	NA	NA	NA	63961693	63959372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63959439_63961192
transcript_62309.known	chr17	-	1135	5	FSM	ENSG00000108622.11	ENST00000579788.6	1135	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	1.22474487139159	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGTGCCCACAGTGTCT	NA	False	NA	1	True	AATACA	-15	NA	64020633	64002594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64002926_64003643_64003965_64005106_64005374_64006630_64006736_64020522
transcript_62310.known	chr17	-	1364	2	FSM	ENSG00000264954.2	ENST00000662204.1	1364	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATACATGTGTGTATGTAC	-63998970	True	NA	NA	False	NA	NA	NA	63998980	63996047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_63997264_63998832
transcript_62311.known	chr17	+	3128	6	FSM	ENSG00000224383.8	ENST00000412177.6	3128	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	0.748331477354788	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAGACTTAGATGGGCATT	63998291	True	NA	24	True	ATTAAA	-21	NA	63998350	64004305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_63998425_63998706_63998783_63998967_63999075_64001083_64001311_64001466_64001538_64001732
transcript_62313.known	chr17	+	70	1	FSM	ENSG00000199753.1	ENST00000362883.1	70	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCCGAGCGGAGCTGGGA	64141831	True	NA	39	True	NA	NA	NA	64146082	64146152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64146100_64146200
transcript_62314.known	chr17	+	106	2	FSM	ENSG00000266402.4	ENST00000580828.1	106	2	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	0	2374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGTGTCGGTGTGTGTC	64141718	True	NA	28	True	AATAAA	-16	NA	64145969	64146309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64145996_64146229
transcript_62315.known	chr17	+	278	2	FSM	ENSG00000266402.4	ENST00000582965.2	290	2	12	0	0	0	multi-exon	FALSE	canonical	3	228	junction_1	0	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGACTGTCCGGCTGCTAG	64141718	True	NA	28	True	NA	NA	NA	64145969	64146476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64146001_64146229
transcript_62316.known	chr17	-	1601	9	FSM	ENSG00000256525.8	ENST00000585104.2	1601	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	72.697575612946	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTATATATCATCAGCTAAG	-64496531	False	NA	-67	True	ATTAAA	-15	NA	64496939	64477851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64477989_64480288_64480390_64481245_64481447_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_6232.known	chr1	-	378	5	FSM	ENSG00000162601.11	ENST00000483003.5	378	5	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	24.2538656712698	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGTTAAAAATTATGGAAT	-58689713	True	NA	NA	False	TATAAA	-11	NA	58700072	58690187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58690250_58690339_58690418_58692860_58692932_58695128_58695208_58699984
transcript_62320.known	chr17	-	1557	9	FSM	ENSG00000256525.8	ENST00000671755.1	1557	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	78.1824788555595	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATAATAAATATTCTTCT	-64496531	False	NA	-27	True	NA	NA	NA	64496939	64477811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64483389_64483507_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_62330.known	chr17	-	1582	8	FSM	ENSG00000256525.8	ENST00000539111.7	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_7	30.4429878659123	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-64496646	False	20761	0	True	AATAAA	-17	NA	64497054	64477784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_62331.nic	chr17	-	1463	8	NIC	ENSG00000256525.8	novel	1582	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_7	66.7914817983276	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTGTCTTATGTTCAC	-64496652	False	20761	0	True	AATAAA	-17	NA	64497060	64477784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_64477989_64480288_64480390_64482918_64483000_64485727_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496531
transcript_62339.known	chr17	-	1731	5	FSM	ENSG00000256525.8	ENST00000585141.5	1731	5	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_4	18.8331489666492	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGGTCAGGATGGGATCAA	-64496611	False	20761	NA	False	AAGAAA	-31	NA	64497019	64485157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64485869_64490795_64490970_64492666_64492773_64492894_64493022_64496406
transcript_62344.known	chr17	+	2754	20	FSM	ENSG00000258890.8	ENST00000556440.7	2754	20	0	0	0	0	multi-exon	FALSE	canonical	2	39	junction_4	54.2678286825344	499	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATTGCTTTTGAATTTA	64505939	True	NA	14	True	AATAAA	-16	NA	64506976	64537946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_64507117_64508591_64508721_64510172_64510281_64514247_64514359_64516722_64516829_64519320_64519437_64521401_64521528_64522701_64522896_64525769_64525883_64526070_64526201_64527110_64527265_64529287_64529428_64530925_64531019_64531889_64532023_64532838_64533009_64533116_64533192_64534584_64534738_64536601_64536749_64537040_64537113_64537602
transcript_62358.known	chr17	-	3868	14	FSM	ENSG00000108654.16	ENST00000577922.6	3868	14	0	0	0	0	multi-exon	FALSE	canonical	1	35	junction_13	986.46349992607	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	-64506692	False	NA	-10	True	AATAAA	-14	NA	64506731	64498257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506260_64506513
transcript_62359.known	chr17	-	4461	14	FSM	ENSG00000108654.16	ENST00000585111.2	4461	14	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_13	980.47334299886	1601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCATTCTCTCTTTTTATTT	-64507523	True	NA	-10	True	AATAAA	-14	NA	64507562	64498257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075_64506263_64506754
transcript_62360.known	chr17	-	2021	13	FSM	ENSG00000108654.16	ENST00000578804.5	2021	13	0	0	0	0	multi-exon	FALSE	canonical	2	87	junction_12	1007.67698679796	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATATGTAAATGTCTGTT	-64505917	False	NA	NA	False	NA	NA	NA	64505956	64499913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64505745
transcript_62368.known	chr17	-	3684	13	FSM	ENSG00000108654.16	ENST00000225792.10	3684	13	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_10	216.490232651114	2864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTTTTTATTTATTT	-64485528	True	NA	-6	True	AATAAA	-18	NA	64506289	64498253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64500774_64502009_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_62369.known	chr17	-	3558	12	FSM	ENSG00000108654.16	ENST00000581230.5	3558	12	0	0	0	0	multi-exon	FALSE	canonical	3	3156	junction_9	198.690922401171	1508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGAAATTGTACTTTATTT	-64485528	True	NA	-4	True	AATAAA	-23	NA	64506289	64499615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64500327_64500548_64502070_64502161_64502224_64502438_64502550_64502925_64503099_64503187_64503349_64503429_64503572_64503802_64503869_64503982_64504117_64504221_64504319_64504676_64504843_64506075
transcript_62372.known	chr17	-	1168	6	FSM	ENSG00000214176.10	ENST00000584585.2	1191	6	20	3	3	0	multi-exon	FALSE	canonical	1	3	junction_1	8.22192191643779	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCATAGATAATCTTTTT	-64836408	True	NA	NA	False	AATAAA	-37	NA	64837136	64820693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64821018_64821766_64822053_64822253_64822394_64824624_64824873_64829160_64829250_64837055
transcript_62389.nnic	chr17	-	1132	6	FSM	ENSG00000214174.9	ENST00000693419.1	1068	6	-76	12	-64	0	multi-exon	FALSE	canonical	3	39	junction_5	74.8668150785113	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64975654	False	NA	70	True	AATAAA	-15	NA	64975681	64968037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64974554_64974642_64975559
transcript_6239.known	chr1	-	698	3	FSM	ENSG00000162601.11	ENST00000489282.1	698	3	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	21.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATGTTTTCCCTACATT	-58689718	True	NA	NA	False	AATAAA	-26	NA	58700077	58692405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_58692932_58695128_58695208_58699984
transcript_624.known	SIRV6001	+	6000	1	FSM	SIRV6001A	SIRV6001	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	423	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6001_+_0_6000
transcript_62413.nnic	chr17	-	1052	5	FSM	ENSG00000214174.9	ENST00000690715.1	993	5	-71	12	-71	0	multi-exon	FALSE	canonical	3	13	junction_4	85.9156563147835	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64975661	False	NA	70	True	AATAAA	-15	NA	64975688	64968037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64973241_64973518_64975559
transcript_62428.nnic	chr17	-	936	4	FSM	ENSG00000214174.9	ENST00000690613.1	921	4	-22	7	-13	0	multi-exon	FALSE	canonical	3	30	junction_1	94.0673517574863	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	-64974004	True	NA	72	True	AATAAA	-17	NA	64975630	64968035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972317_64972663_64972753_64972928_64975559
transcript_62431.nnic	chr17	-	775	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-70	12	-70	0	multi-exon	FALSE	canonical	3	35	junction_3	86.3185315496556	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64975660	False	NA	70	True	AATAAA	-15	NA	64975687	64968037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_62433.nnic	chr17	-	646	4	FSM	ENSG00000214174.9	ENST00000689168.1	717	4	-18	89	-18	-4	multi-exon	FALSE	canonical	3	35	junction_3	86.3185315496556	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGACTAGAACCTTCT	-64975608	False	NA	-7	True	AATAAA	-25	NA	64975635	64968114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64972928_64975559
transcript_62443.known	chr17	-	2259	4	FSM	ENSG00000214174.9	ENST00000397713.5	2259	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	70.517137396995	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTTCTCATCTTACTG	-64973950	True	NA	70	True	AATAAA	-15	NA	64975576	64968037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_64968382_64972533_64972663_64972753_64973518_64974554
transcript_62447.known	chr17	+	645	10	FSM	ENSG00000108370.17	ENST00000577186.1	645	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	5.2068331172711	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATAAAGTATTAAGAAGAATA	65137166	False	NA	NA	False	NA	NA	NA	65137591	65180037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65179995
transcript_62457.known	chr17	+	1144	5	FSM	ENSG00000108370.17	ENST00000637818.1	1144	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	55.52251795443	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCCTAAGAAAATTTTCTT	65099056	True	NA	NA	False	AATAAA	-21	NA	65100829	65119585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65101043_65101206_65101297_65110715_65110967_65117054_65117211_65119151
transcript_62458.nnic	chr17	+	835	4	NNC	ENSG00000108370.17	novel	2736	3	NA	NA	-60	-18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	51.4867836331703	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTAGATGGATGCTTGATT	NA	False	NA	9	True	AATAAA	-1	NA	65100751	65111095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_65101043_65101206_65101297_65102488_65102563_65110715
transcript_62462.known	chr17	+	2736	3	FSM	ENSG00000108370.17	ENST00000638125.1	2736	3	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	2	1091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGATTTCGTTGATT	65099038	True	NA	16	True	TATAAA	-19	NA	65100811	65113130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65101043_65101206_65101297_65110715
transcript_62463.known	chr17	+	761	3	FSM	ENSG00000108370.17	ENST00000583473.5	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGAGCACCTGCAGATC	65137005	True	NA	NA	False	NA	NA	NA	65137430	65158791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294
transcript_62464.known	chr17	+	563	2	FSM	ENSG00000108370.17	ENST00000582940.2	563	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTCTAATTCCTTAGCA	65099104	True	NA	27	True	AATAAA	-19	NA	65100877	65111113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65101043_65110715
transcript_62465.known	chr17	+	2492	19	FSM	ENSG00000108370.17	ENST00000262406.10	2492	19	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_16	4.75478965795102	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTAGTGTGTGTCTGGTTT	65136944	True	NA	16	True	AATAAA	-25	NA	65137369	65227703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_65137598_65153421_65153519_65158294_65158346_65160232_65160340_65160535_65160588_65160850_65160910_65163012_65163090_65168199_65168282_65177731_65177804_65189285_65189316_65190174_65190237_65193542_65193657_65197125_65197242_65201992_65202081_65204162_65204302_65207921_65208008_65210487_65210606_65225001_65225487_65227274
transcript_62467.known	chr17	-	3447	27	FSM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_12	4.58725401610637	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTATTTCTACTTTTTAT	-66191449	True	NA	3	True	ATTAAA	-21	NA	66192133	65635536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_65635975_65637123_65637189_65640963_65641066_65689128_65689219_65743067_65743218_65750661_65750725_65851803_65852035_65902151_65902335_65927581_65927690_65961462_65961599_66005689_66005770_66027500_66027561_66028312_66028406_66029122_66029253_66029868_66030024_66053735_66053880_66062962_66063082_66066777_66066878_66069914_66070002_66096250_66096329_66096584_66096633_66129745_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_62472.nic	chr17	-	966	6	ISM	ENSG00000154240.17	ENST00000535342.7	3447	27	0	494030	0	47087	5prime_fragment	FALSE	canonical	3	13	junction_3	2.72763633939717	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCCCTGTCCCCAACAAG	-66191449	True	NA	NA	False	AATAAA	-24	NA	66192133	66129566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_66129824_66132669_66132764_66175043_66175217_66176829_66177021_66183193_66183308_66191996
transcript_62478.known	chr17	+	1302	4	FSM	ENSG00000108878.5	ENST00000226021.5	1302	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTTCCTGGAGCCT	NA	False	NA	NA	False	AATAAA	-15	NA	67044553	67056797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67044890_67053995_67054071_67055102_67055241_67056044
transcript_62479.known	chr17	-	1872	14	FSM	ENSG00000198265.12	ENST00000417253.7	1872	14	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	18.9296423882425	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAAGGCTATCTAGGGA	-67240332	True	NA	NA	False	AATATA	-3	NA	67245187	67167525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_62481.known	chr17	-	13817	33	FSM	ENSG00000198265.12	ENST00000358691.10	13817	33	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_5	21.7642733338377	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAGATGTGTTTATTAT	-67240341	True	NA	NA	False	AATAAA	-16	NA	67245196	67070443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67078587_67086828_67087082_67107168_67107686_67108491_67108727_67109115_67109687_67114323_67114404_67120404_67120613_67122969_67123161_67123962_67124015_67128650_67128856_67135969_67136199_67137930_67138115_67145742_67145891_67148568_67148715_67149866_67149986_67151045_67151225_67160260_67160363_67160896_67161077_67166477_67166609_67167462_67167797_67178658_67178927_67188318_67188617_67189588_67189697_67190156_67190356_67193966_67194043_67195418_67195471_67201128_67201186_67203318_67203444_67215898_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_62482.known	chr17	-	520	5	FSM	ENSG00000198265.12	ENST00000580963.1	520	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_4	17.3277234511635	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTGGCTAGTGACTGATT	-67240323	True	NA	NA	False	NA	NA	NA	67245178	67215787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67215936_67218594_67218823_67239432_67239490_67243783_67243840_67245147
transcript_62485.nnic	chr17	+	297	2	Intergenic	novelGene_17	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	8	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTACAAGCTCCTGTGTGA	67245854	False	NA	8	True	AATAAA	-20	NA	67245870	67247542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr17_+_67245969_67247343
transcript_62489.nnic	chr17	+	559	2	NNC	ENSG00000285877.1	novel	2511	5	NA	NA	1616	-15052	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGCATGGTGGTGCGTG	67245774	True	NA	NA	False	ATTAAA	-14	NA	67245897	67258451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_67245969_67257963
transcript_6249.nic	chr1	-	970	4	NIC	ENSG00000235215.2	novel	317	3	NA	NA	-271	1864	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	0.942809041582063	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGCATTTCTGTGTCC	NA	False	NA	5	True	AATAAA	-19	NA	59078387	59054134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_59054531_59056012_59056186_59059637_59059683_59078031
transcript_62494.known	chr17	-	2437	10	FSM	ENSG00000197170.10	ENST00000357146.4	2437	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	423.693809778293	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGAATTGGTGTGAACGA	-67344912	True	NA	NA	False	ATTAAA	-28	NA	67366605	67339802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67366411
transcript_62495.known	chr17	-	4356	11	FSM	ENSG00000197170.10	ENST00000356126.8	4356	11	0	0	0	0	multi-exon	FALSE	canonical	3	1236	junction_3	64.8617761088917	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCTTTTCAGTTCTCAT	-67344884	True	NA	-1	True	AATAAA	-20	NA	67366577	67337915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67341053_67342185_67342264_67344605_67344781_67345744_67345858_67347115_67347251_67347335_67347486_67348549_67348655_67350228_67350337_67357302_67357432_67357518_67357579_67366411
transcript_62497.known	chr17	+	6182	10	FSM	ENSG00000154217.16	ENST00000580974.5	6182	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	92.2433710689979	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	67377362	True	NA	8	True	AATAAA	-17	NA	67377458	67697256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_625.known	SIRV6002	+	6000	1	FSM	SIRV6002A	SIRV6002	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6002_+_0_6000
transcript_62501.known	chr17	+	6241	9	FSM	ENSG00000154217.16	ENST00000581322.6	6241	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	106.890057418826	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCAAGCGTAGCTTCCTC	67374329	True	NA	8	True	AATAAA	-17	NA	67377280	67697256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67378203_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
transcript_62502.known	chr17	+	6359	9	NNC	ENSG00000154217.16	novel	6182	10	NA	NA	0	5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	89.8560480713458	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCGTAGCTTCCTCTCTCT	67374329	True	NA	13	True	AATAAA	-22	NA	67377280	67697261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_67378203_67532801_67532951_67552256_67552346_67578183_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67687065_67687185_67692571
transcript_62503.nic	chr17	+	1442	9	NIC	ENSG00000154217.16	novel	1735	7	NA	NA	-28	-443	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	121.859550302797	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTTGTTGTTGTTTTTTT	67378918	False	NA	36	True	TATAAA	-26	NA	67378937	67692924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_67379393_67532801_67532951_67552256_67552346_67553609_67553618_67578185_67578258_67632142_67632239_67669507_67669664_67675478_67675543_67692571
transcript_62507.known	chr17	+	2844	18	FSM	ENSG00000130935.10	ENST00000253247.9	2844	18	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_10	65.1180987284405	666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTTTAATCTCTCAGTA	67706561	True	NA	3	True	AATAAA	-15	NA	67717935	67744531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67718089_67719673_67719788_67719905_67719963_67721377_67721527_67722579_67722638_67724048_67724194_67726459_67726649_67734362_67734440_67735899_67736024_67736665_67736755_67737070_67737146_67737507_67737693_67737846_67737973_67738121_67738356_67738931_67739011_67739515_67739609_67743478_67743587_67743742
transcript_62510.known	chr17	+	11075	28	FSM	ENSG00000171634.19	ENST00000306378.11	11075	28	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	74.5653707362308	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGTGCAGTTTCTAATGA	67819859	True	NA	10	True	AATAAA	-21	NA	67825502	67984378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_67826338_67853939_67854763_67866463_67866688_67874816_67875021_67891843_67892035_67893369_67893726_67894033_67894166_67903788_67903919_67904701_67904841_67909581_67909762_67910876_67913188_67918713_67918839_67920014_67920144_67922839_67922991_67924546_67924590_67928354_67928602_67929335_67929488_67931910_67932020_67940438_67940657_67944149_67944373_67945408_67946326_67947725_67947809_67948080_67948307_67959540_67959876_67964211_67964405_67966571_67966657_67975771_67975959_67982251
transcript_62515.nic	chr17	+	1178	3	ISM	ENSG00000171634.19	ENST00000544778.6	7573	22	494	79393	-15	-25464	5prime_fragment	FALSE	canonical	3	73	junction_2	7	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTATTACAGCACAAAG	67825835	False	NA	31	True	AAGAAA	-2	NA	67826017	67866498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_67826338_67853939_67854763_67866463
transcript_62516.nic	chr17	+	1143	2	ISM	ENSG00000171634.19	ENST00000544778.6	7573	22	494	91129	-15	-37200	5prime_fragment	FALSE	canonical	3	87	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAAATCTGGTCTTAA	67825835	False	NA	NA	False	NA	NA	NA	67826017	67854762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_67826338_67853939
transcript_62517.nnic	chr17	-	566	2	Antisense	novelGene_ENSG00000279880.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	7	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAGGTCTTCAAGAAAATAA	NA	False	NA	-2	True	ATTAAA	-24	NA	67975000	67969656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_67969899_67974676
transcript_62519.known	chr17	-	1082	3	FSM	ENSG00000186665.10	ENST00000449250.3	1082	3	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	22	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAATAAAATAAAAAATAGT	-67991524	True	NA	NA	False	ATTAAA	-5	NA	67993545	67991335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67992104_67993043_67993236_67993423
transcript_62520.nnic	chr17	-	1480	3	NIC	ENSG00000186665.10	novel	2105	4	NA	NA	64	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_2	98	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGATGCACCTGTTTGT	-67996395	False	NA	-6	True	AATAAA	-19	NA	67996405	67991098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_67992104_67993043_67993236_67996122
transcript_62521.known	chr17	-	1535	3	FSM	ENSG00000186665.10	ENST00000334461.7	1535	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	53.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAGCAATAAATCTTGAC	-67993639	False	NA	-37	True	NA	NA	NA	67993649	67991129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67992104_67992900_67993236_67993423
transcript_62522.known	chr17	-	1654	2	FSM	ENSG00000186665.10	ENST00000536693.1	1654	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTGGATGCACCTGTT	-67991531	True	NA	-9	True	AATAAA	-16	NA	67993552	67991101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_67992104_67992900
transcript_62528.known	chr17	+	1977	11	FSM	ENSG00000182481.10	ENST00000330459.8	1977	11	0	0	0	0	multi-exon	FALSE	canonical	3	4225	junction_6	282.770596066847	9902	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979121	True	NA	19	True	AATAAA	-30	NA	68035734	68046854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043000_68043099_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_62529.known	chr17	+	611	5	FSM	ENSG00000182481.10	ENST00000583269.5	611	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1911.25586984056	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCACTAACATTGCTTCT	67979094	True	NA	NA	False	NA	NA	NA	68035707	68042209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037329_68037496_68040677_68040767_68042084
transcript_62530.known	chr17	+	2082	10	FSM	ENSG00000182481.10	ENST00000679346.1	2082	10	0	0	0	0	multi-exon	FALSE	canonical	3	4248	junction_4	279.890631197435	1261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTATGTGTTGCTTT	67979116	True	NA	19	True	AATAAA	-30	NA	68035729	68046854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68035841_68037109_68037208_68037357_68037496_68040677_68040767_68042084_68042354_68042904_68043364_68043837_68044072_68044320_68044504_68045771_68045922_68046503
transcript_62531.known	chr17	-	672	3	FSM	ENSG00000265055.2	ENST00000579629.2	672	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTTTAATGAGTGTGG	-68101452	True	NA	54	True	ATTAAA	-30	NA	68101496	68096045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68096479_68100551_68100709_68101414
transcript_62532.known	chr17	-	432	2	FSM	ENSG00000265055.2	ENST00000584047.1	432	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTTTGTTTATATAC	-68101425	True	NA	-2	True	AATAAA	-17	NA	68101469	68096101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68096479_68101414
transcript_62533.known	chr17	-	1369	2	FSM	ENSG00000265055.2	ENST00000666251.1	1369	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTTTTTTAATGAGTGT	-68101445	True	NA	52	True	ATTAAA	-28	NA	68101489	68096047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68096479_68100551
transcript_62535.nnic	chr17	+	643	4	NIC	ENSG00000237854.4	novel	1357	5	NA	NA	-42	-646	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_1	11.5758369027902	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGGAAAGAACAATTA	68101807	True	NA	NA	False	AAAAAG	-1	NA	68101831	68125902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_68101962_68114421_68114526_68125389_68125481_68125584
transcript_62536.known	chr17	+	446	1	FSM	ENSG00000274561.1	ENST00000613178.1	446	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGGTTAATCTTAAGCAAT	NA	False	NA	NA	False	AATAAA	-29	NA	68131461	68131907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68131500_68131900
transcript_6254.known	chr1	-	317	3	FSM	ENSG00000235215.2	ENST00000451090.1	317	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTGCTTCACATTGAT	-59078063	False	NA	NA	False	NA	NA	NA	59078116	59055998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59056186_59059637_59059683_59078031
transcript_62540.known	chr17	+	1339	8	FSM	ENSG00000196704.14	ENST00000580753.5	1339	8	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	255.799267602787	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTCTAGAAACTCTTTATC	68243044	True	NA	4	True	AATAAA	-1	NA	68248034	68257139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248059_68248643_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62545.known	chr17	+	1378	8	FSM	ENSG00000196704.14	ENST00000392720.6	1378	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	256.145048193959	778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCTTCTCATCTTACTGG	68243052	True	NA	19	True	AATAAA	-16	NA	68248042	68257154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248087_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62555.nic	chr17	+	1416	8	NIC	ENSG00000196704.14	novel	1498	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	52	junction_1	298.749707539777	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	68243039	True	NA	20	True	AATAAA	-17	NA	68248029	68257155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_68248111_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62557.known	chr17	+	1498	8	FSM	ENSG00000196704.14	ENST00000612294.4	1498	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	316.7969155694	483	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTACTGGCCTGGTCTGT	68243013	True	NA	29	True	AATAAA	-26	NA	68248003	68257164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248158_68248639_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62559.known	chr17	+	1492	8	FSM	ENSG00000196704.14	ENST00000577866.5	1492	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	405.427766031617	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCTTTCAAGTACCTGAA	68248493	False	NA	39	True	AATAAA	-39	NA	68248503	68257090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248706_68249010_68249097_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62565.known	chr17	+	1932	7	FSM	ENSG00000196704.14	ENST00000359904.8	1932	7	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_2	42.4368812342388	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTCATCTTACTGGC	68243052	True	NA	20	True	AATAAA	-17	NA	68248042	68257155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248706_68250187_68250471_68250793_68250968_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62580.known	chr17	+	1722	6	FSM	ENSG00000196704.14	ENST00000359783.8	1722	6	0	0	0	0	multi-exon	FALSE	canonical	2	48	junction_2	350.375798250964	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAATAATAAAAACTCTAG	68243060	True	NA	-8	True	AATGAA	-8	NA	68248050	68257127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68248706_68250187_68250471_68251049_68251179_68254403_68254568_68255699_68255877_68256813
transcript_62589.known	chr17	+	2554	12	FSM	ENSG00000141337.13	ENST00000621439.5	2554	12	0	0	0	0	multi-exon	TRUE	canonical	2	12	junction_10	6.47053078155427	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGACACAGAGCAGACATT	68290819	True	NA	NA	False	AATAAA	-29	NA	68291494	68420814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68291569_68306942_68307712_68343603_68343792_68347124_68347173_68351574_68351687_68356666_68356805_68368547_68368745_68370443_68370525_68385063_68385173_68395072_68395194_68401359_68401451_68420188
transcript_62593.known	chr17	+	701	2	FSM	ENSG00000141337.13	ENST00000578726.1	701	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAGAAAGCCAGAATAAC	68259307	False	NA	NA	False	NA	NA	NA	68259400	68274564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68259427_68273889
transcript_62597.known	chr17	-	1886	13	FSM	ENSG00000070540.13	ENST00000589316.5	1886	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.7608424741138	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACACTAATAATAAAATCAT	-68456222	True	NA	-44	True	AATAAA	-29	NA	68457499	68421309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_62599.known	chr17	-	1804	12	FSM	ENSG00000070540.13	ENST00000589459.5	1804	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	60.0747468293589	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACACTAATAATAAAATCATG	-68456222	True	NA	-43	True	AATAAA	-30	NA	68457499	68421308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433463_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68457341
transcript_626.known	SIRV6003	+	6000	1	FSM	SIRV6003A	SIRV6003	6000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	6000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV6003_+_0_6000
transcript_62602.known	chr17	-	1908	13	FSM	ENSG00000070540.13	ENST00000262139.10	1908	13	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_5	30.5053501682719	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAGGTTTTTATATAT	-68456219	True	NA	-15	True	AATAAA	-15	NA	68457496	68421280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_68421821_68426074_68426176_68427134_68427254_68428828_68428937_68429995_68430161_68433467_68433576_68434555_68434627_68435619_68435713_68436381_68436480_68444492_68444590_68450727_68450898_68452909_68452993_68457341
transcript_62606.known	chr17	+	3697	12	FSM	ENSG00000108946.16	ENST00000536854.6	3697	12	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	629.978354606511	449	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	68495379	True	NA	NA	False	AATAAA	-21	NA	68512449	68532762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68514986_68515120_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_62608.known	chr17	+	3576	11	FSM	ENSG00000108946.16	ENST00000358598.6	3576	11	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_1	470.922329052255	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTTAAATGAATCAGTTTT	68509958	True	NA	NA	False	AATAAA	-21	NA	68512031	68532762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512143_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_62615.known	chr17	+	3551	11	FSM	ENSG00000108946.16	ENST00000392710.8	3551	11	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	483.640320899736	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTTAAATGAATCAGT	68495379	True	NA	NA	False	AATAAA	-18	NA	68512449	68532759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68515393_68515567_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_62616.nic	chr17	+	1379	11	NIC	ENSG00000108946.16	novel	1209	10	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	3	193	junction_10	449.667254756225	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68510311	False	NA	18	True	AATAAA	-25	NA	68512384	68551319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_68512549_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_62621.known	chr17	+	4327	11	FSM	ENSG00000108946.16	ENST00000392711.5	4327	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	496.040159664517	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGAAAATTTCTCTGGGTT	68510305	False	NA	NA	False	AATAAA	-9	NA	68512378	68533423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512580_68515393_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68530276
transcript_62633.known	chr17	+	556	2	FSM	ENSG00000108946.16	ENST00000592194.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAACAATTCTTTGTAACTT	68495344	True	NA	NA	False	AATAAA	-8	NA	68512414	68515815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68512549_68515393
transcript_62638.known	chr17	+	1209	10	FSM	ENSG00000108946.16	ENST00000588188.6	1209	10	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_9	472.948904921733	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGACTTCCTAGTAGCCTTT	68515330	True	NA	18	True	AATAAA	-25	NA	68515399	68551319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_68515577_68522755_68522927_68523724_68523817_68524015_68524078_68524911_68524959_68525753_68525913_68527839_68527901_68528869_68528992_68529919_68530002_68551083
transcript_62639.known	chr17	+	557	5	ISM	ENSG00000108946.16	ENST00000585427.6	2726	11	4	7893	1	-84	5prime_fragment	FALSE	canonical	3	23	junction_1	731.303630511978	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATCGCAGGAGAGACTGT	68495345	True	NA	NA	False	NA	NA	NA	68512415	68524046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_68512496_68515393_68515577_68522755_68522927_68523724_68523817_68524015
transcript_62641.nic	chr17	+	839	6	NIC	ENSG00000231749.3	novel	550	4	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_4	1.85472369909914	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTCTGTCTGCAGCTTT	69004627	True	NA	NA	False	AATAAA	-29	NA	69004719	69020806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_69004794_69011982_69012104_69012251_69012354_69018103_69018152_69019881_69019995_69020425
transcript_62642.nic	chr17	+	793	6	NIC	ENSG00000231749.3	novel	550	4	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	2.44948974278318	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCTCTGTCTGCAGCTTT	69004634	True	NA	NA	False	AATAAA	-29	NA	69004726	69020806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_69004794_69011982_69012104_69012251_69012354_69018103_69018152_69019920_69019995_69020425
transcript_62643.nnic	chr17	+	392	4	NNC	ENSG00000231749.3	novel	523	4	NA	NA	-3	922	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	2.62466929133727	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTTCTGTGCCTGGCTT	69004618	True	NA	NA	False	AATAAA	-18	NA	69004710	69012972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_69004794_69011982_69012104_69012251_69012354_69012886
transcript_62646.nic	chr17	-	1030	7	ISM	ENSG00000154265.16	ENST00000593153.5	3017	21	-15	32792	-15	0	5prime_fragment	FALSE	canonical	0	0	junction_6	6.23609564462324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGATAATGGGACT	-69327104	True	NA	NA	False	AATAAA	-5	NA	69327197	69306762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69325698_69325818_69327051
transcript_62648.known	chr17	-	804	6	FSM	ENSG00000154265.16	ENST00000587607.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	5.70613704707484	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGATAATGGGACT	-69327067	False	NA	NA	False	AATAAA	-5	NA	69327090	69306762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_69306955_69308279_69308369_69309261_69309424_69313091_69313297_69314313_69314431_69327051
transcript_6265.nnic	chr1	-	460	3	NNC	ENSG00000224609.8	novel	2544	2	NA	NA	-88	-1570	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1.5	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTCTGGCATTCTGT	-59296481	True	NA	NA	False	AATAAA	-21	NA	59296579	59293300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_59293391_59295108_59295268_59296368
transcript_62654.known	chr17	+	1851	12	FSM	ENSG00000108984.15	ENST00000359094.7	1851	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	34.0510069510457	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTTCTTCTGACACTTG	69412013	False	NA	NA	False	AGTAAA	-4	NA	69414833	69542510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517552_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_62657.known	chr17	+	13405	12	FSM	ENSG00000108984.15	ENST00000590474.7	13405	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	14.5044877637666	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGTCTGTACATTAATTG	69411876	True	NA	19	True	AATAAA	-20	NA	69414696	69553865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_62666.known	chr17	+	1512	12	FSM	ENSG00000108984.15	ENST00000589647.5	1512	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	32.649655434629	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCAAGCTTCTCAGACTT	69502251	False	NA	38	True	ATTAAA	-24	NA	69502428	69542019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69502686_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048_69521101_69523513_69523642_69524900_69524979_69526569_69526710_69536114_69536161_69541675
transcript_62671.known	chr17	+	1542	7	FSM	ENSG00000108984.15	ENST00000586641.5	1542	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	11.4515889242013	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACCTTAGAAATATGAAAG	69411890	True	NA	NA	False	GATAAA	-33	NA	69414710	69521833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69415001_69505779_69505847_69516854_69516904_69517499_69517614_69519312_69519433_69520269_69520387_69521048
transcript_62672.known	chr17	+	431	2	FSM	ENSG00000108984.15	ENST00000592348.1	431	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATATGAGTCCTCAAGCTTC	NA	False	NA	30	True	ATTAAA	-16	NA	69536065	69542011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_69536161_69541675
transcript_62673.known	chr17	+	5391	2	FSM	ENSG00000123700.5	ENST00000243457.4	5391	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATTCTTGGAAGAATCTT	70169504	True	NA	NA	False	AATAAA	-19	NA	70169531	70180044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_70169702_70174823
transcript_62678.known	chr17	-	645	4	FSM	ENSG00000228639.8	ENST00000430908.8	645	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTACATGTGTCTT	NA	False	NA	NA	False	AATAAA	-19	NA	72030604	72021850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72021980_72024152_72024305_72025897_72025978_72030320
transcript_62682.nnic	chr17	+	421	3	NNC	ENSG00000256124.6	novel	3684	3	NA	NA	4	1133	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATTTTCTTAATAACAT	NA	False	NA	NA	False	AATAAA	-17	NA	72030604	72037449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_72030852_72037044_72037132_72037362
transcript_62683.known	chr17	+	3684	3	FSM	ENSG00000256124.6	ENST00000472655.4	3684	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTATTCTGTGGTTTTT	NA	False	NA	NA	False	AATAGA	-15	NA	72030560	72041310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_72030852_72037044_72037132_72038004
transcript_6269.nic	chr1	+	1935	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	13.2939418115504	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295955	True	NA	8	True	AATAAA	-19	NA	59296782	59762724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_62691.known	chr17	-	4476	5	FSM	ENSG00000234899.11	ENST00000662263.1	4476	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.78535710713571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCTTTCCTTTATAAATT	-72120762	True	NA	NA	False	NA	NA	NA	72120805	72067098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72071232_72081920_72082042_72083905_72084029_72084989_72085046_72120762
transcript_62693.known	chr17	-	482	4	FSM	ENSG00000234899.11	ENST00000657467.1	482	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGATGTGGAAATCCTTTC	-72120767	True	NA	NA	False	ATTAAA	-23	NA	72120810	72071041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72071232_72081920_72082042_72083905_72084029_72120762
transcript_62694.known	chr17	+	3931	3	FSM	ENSG00000125398.8	ENST00000245479.3	3931	3	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGTGGCCCTGTGGATTT	72120556	True	NA	65	True	AATAAA	-19	NA	72121019	72126416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_72121823_72122718_72122973_72123542
transcript_62696.known	chr17	-	2752	10	FSM	ENSG00000133195.12	ENST00000542342.6	2752	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.000561160071	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGACCTGTGTTACGTTCAG	-73090957	True	NA	-18	True	AATAAA	-16	NA	73092688	72645949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_62698.known	chr17	-	2737	10	FSM	ENSG00000133195.12	ENST00000255559.8	2732	10	-5	0	-5	0	multi-exon	FALSE	canonical	3	33	junction_5	13.3287028996694	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACCTGTGTTACGTTCAGT	-73090962	True	NA	-17	True	AATAAA	-17	NA	73092693	72645948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72647663_72648802_72648962_72649169_72649269_72736649_72736720_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_6270.nnic	chr1	+	1909	16	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.6308421780876	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295956	True	NA	8	True	AATAAA	-19	NA	59296783	59762724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59331842_59332033_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_62708.nic	chr17	-	1086	7	NIC	ENSG00000133195.12	novel	1004	7	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	31.2752120518613	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	-73091011	True	NA	-3	True	TTTAAA	-16	NA	73092742	72837799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_72838121_72849633_72849805_72947730_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_6271.known	chr1	+	1873	16	FSM	ENSG00000172456.18	ENST00000303721.12	1873	16	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	18.054977768533	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAGAGTCTTCATTTCAAAA	59297075	True	NA	14	True	AATAAA	-25	NA	59297093	59762730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_59297151_59321535_59321751_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_62710.known	chr17	-	1004	7	FSM	ENSG00000133195.12	ENST00000579732.5	1004	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	24.7835070605881	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATGTTTTTGTGTCTGGT	-73090950	True	NA	-3	True	TTTAAA	-16	NA	73092681	72837799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72838121_72849633_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092610
transcript_62712.known	chr17	-	794	6	FSM	ENSG00000133195.12	ENST00000580557.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	25.7557760512084	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTCTTGCCCGTGAGC	-73090945	True	NA	NA	False	NA	NA	NA	73092676	72849633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_72849805_72947751_72947876_73031555_73031715_73084807_73084847_73088656_73088776_73092494
transcript_62714.known	chr17	+	3618	6	FSM	ENSG00000141219.16	ENST00000535032.7	3618	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	45.4110118803799	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCCCCTGAGCTGATTA	73231671	True	NA	15	True	AATAAA	-22	NA	73232432	73248959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_62718.known	chr17	+	3645	6	FSM	ENSG00000141219.16	ENST00000359042.6	3645	6	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	28.5418990258182	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAAAAAGTACTCCC	73231860	False	NA	3	True	AATAAA	-10	NA	73232621	73248947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242243_73242352_73242895_73243004_73247240
transcript_6272.nic	chr1	+	1729	15	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	15.0219227552702	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295946	True	NA	8	True	AATAAA	-19	NA	59296773	59762724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59339957_59340070_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_62721.known	chr17	+	2049	5	FSM	ENSG00000141219.16	ENST00000577615.5	2049	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	59.8054136345532	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGTGCTGAAACATAATGAA	73231703	False	NA	NA	False	AATAAA	-23	NA	73232464	73247530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232490_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_62723.known	chr17	+	3449	5	FSM	ENSG00000141219.16	ENST00000268942.12	3449	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	51.8766566000547	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGACTCTTTTATACT	73231875	False	NA	17	True	AATAAA	-13	NA	73232636	73248874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_73232718_73233219_73233326_73235475_73236996_73242895_73243004_73247240
transcript_62732.known	chr17	-	2865	4	FSM	ENSG00000133193.13	ENST00000405159.8	2876	4	23	-12	-4	0	multi-exon	FALSE	canonical	3	89	junction_2	156.942310703293	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	73232371	73207352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73209769_73212677_73212741_73227164_73227265_73232085
transcript_62739.known	chr17	-	2798	3	FSM	ENSG00000133193.13	ENST00000403627.7	2798	3	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	18.5	1211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTAATCAGTTATTTAA	NA	False	NA	1	True	ATTAAA	-28	NA	73232367	73207352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73209769_73227164_73227265_73232085
transcript_62744.known	chr17	-	512	2	FSM	ENSG00000133193.13	ENST00000581110.1	512	2	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACAGCCTACAGCACCGAG	NA	False	NA	NA	False	NA	NA	NA	73232394	73209565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73209769_73232085
transcript_62746.known	chr17	-	3098	2	FSM	ENSG00000179604.10	ENST00000335793.4	3098	2	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGGTGTCTGTCTCTGC	-73311227	True	NA	-2	True	ATTAAA	-18	NA	73312001	73283623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_73286613_73311892
transcript_62749.nnic	chr17	+	496	2	Intergenic	novelGene_18	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTGGCATAAGGAAAAGTA	73644425	True	NA	NA	False	ATTAAA	-19	NA	73644503	73646045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr17_+_73644639_73645684
transcript_62751.nnic	chr17	+	555	2	Intergenic	novelGene_19	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTACTTATTTTTTTCTG	73644425	True	NA	NA	False	ATTAAA	-20	NA	73644503	73646104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr17_+_73644639_73645684
transcript_62768.known	chr17	+	344	5	FSM	ENSG00000172809.13	ENST00000584577.5	344	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	6671.64312594731	78441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AAGTGTCTTTCGTCTTTGCG	74128530	True	NA	13	True	ATTAAA	-15	NA	74203692	74209878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203746_74203917_74203959_74204129_74204191_74209186_74209310_74209812
transcript_62769.known	chr17	+	431	5	FSM	ENSG00000172809.13	ENST00000439590.6	431	5	0	0	0	0	multi-exon	FALSE	canonical	3	870	junction_1	6336.68514978455	21460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTTTCGTCTTTGCGGA	74203560	False	NA	15	True	ATTAAA	-17	NA	74203581	74209880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203711_74203917_74203959_74204129_74204191_74209186_74209310_74209803
transcript_62770.known	chr17	+	532	4	FSM	ENSG00000172809.13	ENST00000533498.1	532	4	0	0	0	0	multi-exon	FALSE	canonical	3	12347	junction_3	1894.3465012153	12007	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGATGGGAAAGGGAAAAAT	74128541	True	NA	31	True	ATTAAA	-33	NA	74203703	74209896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203959_74204129_74204191_74209186_74209310_74209803
transcript_62771.known	chr17	+	576	3	FSM	ENSG00000172809.13	ENST00000529123.2	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	11154	junction_1	2735	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATCGAGCACGGCACACT	74128512	True	NA	NA	False	AATAAA	-22	NA	74203674	74204593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203746_74203917_74203959_74204129
transcript_62772.known	chr17	+	169	3	FSM	ENSG00000172809.13	ENST00000528433.2	169	3	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	8229.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGTGGTTGCTCCGAAGG	74128541	True	NA	5	True	NA	NA	NA	74203703	74204190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74203771_74203917_74203959_74204129
transcript_62773.known	chr17	+	3433	14	FSM	ENSG00000141540.11	ENST00000269346.9	3433	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.86986788024589	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCGTTCCGTTTCTGACT	74213158	True	NA	NA	False	AATAAA	-16	NA	74213570	74262020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74213717_74222484_74222658_74230887_74231000_74237293_74237515_74243373_74243470_74243976_74244050_74249010_74249081_74249343_74249400_74249935_74250029_74250264_74250358_74252233_74252377_74253080_74253267_74253754_74253834_74260128
transcript_62775.known	chr17	+	2240	14	FSM	ENSG00000171595.14	ENST00000582036.5	2240	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.745796901140974	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGTACGTGTGATGC	NA	False	NA	8	True	ATTAAA	-19	NA	74274246	74314884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74274346_74281809_74282001_74285039_74285202_74286976_74287099_74289593_74289737_74291019_74291134_74299717_74299858_74301045_74301169_74305218_74305443_74309252_74309389_74310052_74310164_74312002_74312231_74314120_74314272_74314588
transcript_62777.known	chr17	+	1592	4	FSM	ENSG00000170412.18	ENST00000481232.2	1592	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	29.2232783924049	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74431506	False	NA	13	True	AATAAA	-20	NA	74431527	74447429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74432142_74439744_74440047_74443817_74443913_74446848
transcript_62778.known	chr17	+	1813	4	FSM	ENSG00000170412.18	ENST00000392627.7	1813	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	24.5266295188629	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCTCTGGGATTGTGG	74431555	True	NA	13	True	AATAAA	-20	NA	74432087	74447429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74432142_74439744_74440828_74443817_74443913_74446848
transcript_62781.known	chr17	+	393	3	FSM	ENSG00000170412.18	ENST00000582873.1	393	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	37	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAGGGACTCTCCAGGCTC	74443065	False	NA	NA	False	NA	NA	NA	74443076	74447088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74443135_74443817_74443913_74446848
transcript_62782.known	chr17	+	1638	7	FSM	ENSG00000167851.15	ENST00000360141.8	1638	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	74466542	False	NA	7	True	AGTAAA	-16	NA	74466633	74484794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_62783.known	chr17	+	1785	7	FSM	ENSG00000167851.15	ENST00000648095.1	1785	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.77123616632825	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGCTATGTGTCTGCAA	74466307	True	NA	7	True	AGTAAA	-16	NA	74466398	74484794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74466656_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_62785.nic	chr17	+	1788	6	NIC	ENSG00000167851.15	novel	1638	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.61109401705356	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCTGCTATGTGTCT	74466280	True	NA	3	True	AGTAAA	-12	NA	74466371	74484790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_74466744_74473535_74473875_74474531_74474686_74477435_74477531_74481288_74481327_74484000
transcript_62786.known	chr17	+	631	6	FSM	ENSG00000167851.15	ENST00000310828.9	631	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.19523539268061	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTCCAGGGACAGCTCC	74466583	False	NA	NA	False	NA	NA	NA	74466674	74484167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74466744_74474531_74474686_74477435_74477531_74481288_74481327_74481725_74481834_74484000
transcript_62789.known	chr17	+	1163	5	FSM	ENSG00000167851.15	ENST00000392625.7	1163	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.30116263352131	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATGCCTGCTATGTGTCT	74466566	False	NA	3	True	AGTAAA	-12	NA	74466657	74484790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74466744_74474531_74474686_74477435_74477531_74481288_74481327_74484000
transcript_62793.known	chr17	+	2613	9	FSM	ENSG00000172794.20	ENST00000392613.10	2613	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.87367006223537	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	74736873	True	NA	9	True	ATTAAA	-21	NA	74737255	74747335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74737366_74740767_74740879_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_62795.known	chr17	+	1993	6	FSM	ENSG00000109062.12	ENST00000262613.10	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	670	junction_1	15.107613974417	130	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTCAGCCTCCGTGTGTT	74740932	True	NA	9	True	NA	NA	NA	74748627	74769353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74749288_74762011_74762174_74763366_74763521_74766935_74766977_74768146_74768237_74768467
transcript_62797.known	chr17	+	2195	3	FSM	ENSG00000172794.20	ENST00000488977.1	2195	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	2	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATCCTGTCCACTGTTTCT	74744819	True	NA	8	True	ATTAAA	-20	NA	74744840	74747334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74744930_74745007_74745085_74745305
transcript_62798.nnic	chr17	-	839	3	Antisense	novelGene_ENSG00000172794.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCGTTCATCCAATGT	NA	False	NA	NA	False	ATTAAA	-23	NA	74737488	74729799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_-_74730337_74730822_74730894_74737257
transcript_62800.known	chr17	+	2528	8	FSM	ENSG00000172794.20	ENST00000392612.7	2528	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.82694867242	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGTCCACTGTTTCTT	74736847	True	NA	9	True	ATTAAA	-21	NA	74737229	74747335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74737366_74742253_74742296_74743128_74743196_74743287_74743341_74744307_74744374_74744872_74744930_74745007_74745085_74745305
transcript_62810.known	chr17	-	583	7	FSM	ENSG00000109065.12	ENST00000583476.5	583	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	107.008826219564	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGAGAAGCCTTACAGA	-74773187	True	NA	NA	False	NA	NA	NA	74776337	74771767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74771859_74771959_74771978_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_62816.known	chr17	-	1011	7	FSM	ENSG00000109065.12	ENST00000581136.5	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	95.0327428953949	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGGCCTTTCTCCTTAGAG	-74773174	True	NA	NA	False	NA	NA	NA	74776324	74771388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74771859_74771959_74772040_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_62817.known	chr17	-	839	7	FSM	ENSG00000109065.12	ENST00000578822.5	839	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	104.963088750284	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCAGGGTGTTGGGCCC	-74773148	True	NA	NA	False	NA	NA	NA	74776298	74771694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74771859_74771959_74772055_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775853_74776266
transcript_6283.nic	chr1	+	1608	14	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	15.3098181747655	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295955	True	NA	8	True	AATAAA	-19	NA	59296782	59762724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_62831.known	chr17	-	1993	6	FSM	ENSG00000109065.12	ENST00000583834.5	1993	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_4	16.9587735405601	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGCCTCAGTATAAAACAAA	-74773173	True	NA	-52	True	NA	NA	NA	74776323	74770580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74771859_74771959_74772278_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_62835.nic	chr17	-	2224	6	NIC	ENSG00000109065.12	novel	1103	7	NA	NA	-17	0	intron_retention	FALSE	canonical	3	46	junction_2	92.0738833763408	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTCGTACCATGTGTAC	NA	False	NA	0	True	TATAAA	-38	NA	74776384	74770528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_74771859_74771959_74772396_74772895_74773040_74773575_74773686_74775621_74775708_74776266
transcript_62838.known	chr17	-	573	6	FSM	ENSG00000109065.12	ENST00000582524.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	97.3188573710152	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAAGCCTTACAGAGATG	NA	False	NA	NA	False	NA	NA	NA	74776365	74771763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74771835_74772217_74772278_74772895_74773040_74773575_74773689_74775621_74775708_74776266
transcript_62850.known	chr17	-	418	2	FSM	ENSG00000109065.12	ENST00000579837.1	418	2	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATTAGCCAGGCATGGT	-74773186	True	NA	NA	False	NA	NA	NA	74776336	74775359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74775708_74776266
transcript_62854.known	chr17	+	1781	10	FSM	ENSG00000109066.14	ENST00000417024.6	1781	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	58.2766920775894	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGTTTCCCACATCACTC	74774000	True	NA	20	True	AATAAA	-14	NA	74776498	74839752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74776578_74777263_74777376_74777577_74777739_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_62857.known	chr17	+	4703	10	FSM	ENSG00000109066.14	ENST00000335464.10	4703	10	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	14.9773491531152	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTTTCCCACATCACTCA	74774000	True	NA	21	True	AATAAA	-15	NA	74776498	74839753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74835926
transcript_62858.known	chr17	+	1740	10	FSM	ENSG00000109066.14	ENST00000582773.5	1740	10	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_9	37.8270919961988	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTGTTTCCCACATCACT	74774001	True	NA	19	True	AATAAA	-13	NA	74776499	74839751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199_74790297_74790955_74791037_74795011_74795112_74795523_74795633_74819749_74819844_74838886
transcript_62864.nic	chr17	+	1020	5	ISM	ENSG00000109066.14	ENST00000582773.5	1740	10	-41	48967	-40	-4805	5prime_fragment	FALSE	canonical	3	98	junction_3	20.9448681065315	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAGACTGTGTTAAA	74773960	True	NA	NA	False	NA	NA	NA	74776458	74790784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_74776578_74777263_74777376_74785481_74785604_74788788_74788871_74790199
transcript_62884.known	chr17	-	1766	12	FSM	ENSG00000161513.12	ENST00000582944.5	1766	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_9	78.1328599351956	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCACCAGGTTGGGAACATG	-74871200	True	NA	-50	True	NA	NA	NA	74872985	74862543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866545_74866783_74866877_74872035_74872134_74872865
transcript_62886.known	chr17	-	2482	12	FSM	ENSG00000161513.12	ENST00000578473.5	2482	12	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_11	93.4707272866973	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCATGGTTGATGGGGGA	-74871221	True	NA	-5	True	AATAAA	-15	NA	74873006	74862498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872242
transcript_62887.known	chr17	-	1912	12	FSM	ENSG00000161513.12	ENST00000577509.5	1912	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	95.9141317072569	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAGAGCCATGGTTGAT	-74871183	True	NA	-11	True	AATAAA	-9	NA	74872968	74862504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872768
transcript_62888.known	chr17	-	1827	12	FSM	ENSG00000161513.12	ENST00000581530.5	1827	12	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_6	78.0350631087088	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAGCCATGGTTGATGGGG	-74871176	True	NA	-7	True	AATAAA	-13	NA	74872961	74862500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864950_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866877_74872035_74872134_74872865
transcript_6289.nic	chr1	+	1513	13	NIC	ENSG00000172456.18	novel	4072	17	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	2	12	junction_1	19.4415077147381	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59295955	True	NA	8	True	AATAAA	-19	NA	59296782	59762724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59638227_59638376_59660218_59660294_59667282_59667404_59757930_59757993_59762502
transcript_62890.known	chr17	-	1967	12	FSM	ENSG00000161513.12	ENST00000442102.6	1967	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	78.6376773405768	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGGTTGGGAACATGCT	-74871246	True	NA	-48	True	NA	NA	NA	74873031	74862541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74867006_74872035_74872134_74872865
transcript_62896.known	chr17	-	1705	11	FSM	ENSG00000161513.12	ENST00000420580.6	1705	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	98.9213829260388	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCATGGTTGATGGGGGAC	-74871189	True	NA	-4	True	AATAAA	-16	NA	74872974	74862497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864348_74864479_74864565_74864823_74864932_74865718_74865821_74866130_74866245_74866783_74866880_74872035_74872134_74872865
transcript_62908.known	chr17	-	1762	11	FSM	ENSG00000161513.12	ENST00000583917.5	1762	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	100.245947549016	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAACAGCTGCAACCAAG	-74871230	True	NA	-24	True	NA	NA	NA	74873015	74862517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74862948_74863075_74863247_74863895_74864068_74864147_74864346_74864823_74864932_74865718_74865821_74866130_74866245_74866445_74866569_74866783_74866880_74872035_74872134_74872865
transcript_62910.known	chr17	-	2174	6	FSM	ENSG00000172782.13	ENST00000612771.5	2174	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.01980390271856	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATAAATAACTTTGAATGT	-74893617	False	NA	NA	False	AATAAA	-40	NA	74893633	74877301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74878478_74879403_74879584_74881067_74881256_74882529_74882711_74892522_74892690_74893351
transcript_62911.known	chr17	-	3298	19	FSM	ENSG00000167861.16	ENST00000425042.7	3298	19	0	0	0	0	multi-exon	FALSE	canonical	2	72	junction_16	13.752665286014	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGACTCTGTGGTTGAGG	-74971239	True	NA	-3	True	AATAAA	-16	NA	74972759	74950741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_74951634_74951904_74952064_74952268_74952361_74953005_74953087_74953544_74953652_74954137_74954366_74955791_74955957_74958140_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_62913.nic	chr17	-	1763	12	ISM	ENSG00000167861.16	ENST00000425042.7	3298	19	-17	7227	-5	0	5prime_fragment	FALSE	canonical	2	72	junction_9	13.8456664461789	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTTTATCTATCATCAT	-74971256	True	NA	NA	False	ATTAAA	-27	NA	74972776	74957968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_74958220_74958326_74958479_74958672_74958764_74958910_74959052_74959880_74959938_74960025_74960249_74961872_74961990_74962233_74962341_74962964_74963082_74963739_74963911_74964482_74964633_74972590
transcript_62921.known	chr17	+	894	6	FSM	ENSG00000167862.10	ENST00000301585.10	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_4	19.9138143006306	3945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGGCTTCCCTTCTCATTC	75007028	True	NA	10	True	AATAAA	-13	NA	75012669	75021261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75012873_75017077_75017115_75019699_75019760_75020312_75020396_75020487_75020658_75020920
transcript_62945.known	chr17	-	609	6	FSM	ENSG00000167863.12	ENST00000301587.9	609	6	0	0	0	0	multi-exon	FALSE	canonical	3	2775	junction_5	366.032457577194	53003	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-75011759	True	NA	-11	True	ATTAAA	-16	NA	75046969	75038862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75039064_75039208_75039272_75040091_75040164_75042180_75042278_75042528_75042660_75046924
transcript_62946.known	chr17	-	553	5	FSM	ENSG00000167863.12	ENST00000344546.8	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	1482.69338957857	1233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTGGGTGTGCTTCTTCT	-75011775	True	NA	-11	True	ATTAAA	-16	NA	75046985	75038862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75039064_75039208_75039272_75042180_75042278_75042528_75042660_75046924
transcript_62951.known	chr17	+	1940	7	FSM	ENSG00000170190.16	ENST00000329783.9	1940	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	23.1516738055805	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGGAGGTTGGTTTGGAT	75086271	True	NA	NA	False	AATAAA	-22	NA	75087953	75106162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75088045_75089150_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969_75104181_75105879
transcript_62961.known	chr17	+	1688	6	FSM	ENSG00000170190.16	ENST00000578376.5	1688	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	35.4175097938858	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGTAACCAGCGTCTAAG	75086277	True	NA	NA	False	NA	NA	NA	75087959	75104180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75088045_75089113_75089305_75093588_75093836_75098037_75098182_75100006_75100817_75103969
transcript_62964.known	chr17	-	653	5	FSM	ENSG00000125458.7	ENST00000582170.1	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	259.019666241774	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGCAGCTGGAGCTAAAGG	-75123255	True	NA	NA	False	NA	NA	NA	75131744	75130472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130638_75130752_75130868_75131044_75131106_75131180_75131282_75131533
transcript_62966.known	chr17	-	921	4	FSM	ENSG00000125458.7	ENST00000582744.5	921	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	259.265629551367	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAAACCAGTCGGGACCTT	-75131462	False	NA	-49	True	AATACA	-4	NA	75131473	75130270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131106_75131180
transcript_62967.known	chr17	-	726	4	FSM	ENSG00000125458.7	ENST00000579023.5	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_2	265.892208736297	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTGACAACTGGAGGGAGA	-75123241	True	NA	NA	False	NA	NA	NA	75131730	75130545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130643_75130752_75130868_75130964_75131282_75131533
transcript_62969.known	chr17	-	860	4	FSM	ENSG00000125458.7	ENST00000582160.5	860	4	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_3	15.9652400197707	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTAGGACCCTTTATTTGG	-75131435	False	NA	-3	True	AATAAA	-20	NA	75131446	75130224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131106_75131180
transcript_62970.known	chr17	-	648	4	FSM	ENSG00000125458.7	ENST00000578095.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	629	junction_2	11.323525167642	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACAAGGAGACGGCTGCTC	-75123268	True	NA	NA	False	NA	NA	NA	75131757	75130570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130643_75130752_75130868_75131044_75131282_75131533
transcript_62975.known	chr17	+	1204	3	FSM	ENSG00000125449.7	ENST00000582136.5	1204	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	17.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAATTTCTCTTGTGTTTAT	75108846	True	NA	12	True	AATGAA	-27	NA	75109977	75114826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75110380_75110462_75110607_75114168
transcript_62976.known	chr17	+	445	3	FSM	ENSG00000125449.7	ENST00000584947.1	445	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	22	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTGTGTTTATTATG	75109049	False	NA	16	True	AATGAA	-31	NA	75110180	75114830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75110380_75110462_75110607_75114728
transcript_62977.known	chr17	+	2151	3	FSM	ENSG00000125449.7	ENST00000245543.6	2151	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	3	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTATTTCCATGCCAGCCA	75108837	True	NA	70	True	ATTAAA	-21	NA	75109968	75130272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75110380_75110462_75110607_75128676
transcript_62979.nnic	chr17	-	877	3	NIC	ENSG00000125458.7	novel	901	5	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	320	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTCTAGGACCCTTTATT	-75131516	False	NA	-6	True	AATAAA	-17	NA	75131527	75130227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75130643_75130752_75130868_75131180
transcript_62981.known	chr17	-	582	3	FSM	ENSG00000125458.7	ENST00000578337.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGAGACGGCTGCTCTCC	-75131310	False	NA	NA	False	NA	NA	NA	75131321	75130567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75130868_75130964_75131106_75131180
transcript_62982.nic	chr17	+	983	2	ISM	ENSG00000125449.7	ENST00000582136.5	1204	3	-73	3856	-47	-3856	5prime_fragment	FALSE	canonical	3	45	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGCCGCACACAGTG	75109894	False	NA	NA	False	NA	NA	NA	75109904	75110970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_75110380_75110462
transcript_62996.known	chr17	-	1614	5	FSM	ENSG00000189159.16	ENST00000482348.5	1614	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	854.038933538747	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTGCTTCAAGTAAAC	-75108503	False	NA	-44	True	NA	NA	NA	75153293	75135285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75152904
transcript_63.known	ERCC-00131	+	755	1	FSM	ERCC-00131A	DQ855003	755	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	631	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00131_+_0_800
transcript_63010.known	chr17	-	490	4	FSM	ENSG00000188612.12	ENST00000578238.2	490	4	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_3	1983.26011069317	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACCAAGATTACATTCTCA	-75182536	False	69853	NA	False	NA	NA	NA	75182563	75168297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182381
transcript_63018.known	chr17	-	1434	5	FSM	ENSG00000189159.16	ENST00000409753.8	1434	5	0	0	0	0	multi-exon	FALSE	canonical	3	1884	junction_3	62.9166114790045	17179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGTGTACTGTGTCTTCT	-75109722	True	NA	-6	True	AGTAAA	-20	NA	75154512	75135247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75136251_75146665_75146685_75147555_75147654_75148528_75148672_75154341
transcript_63019.known	chr17	-	3166	4	FSM	ENSG00000188612.12	ENST00000420826.7	3166	4	0	0	0	0	multi-exon	FALSE	canonical	3	3634	junction_3	361.719043826375	12775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAGTATTATGTGTTA	-75113106	True	NA	-1	True	AATATA	-17	NA	75182959	75165585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75168402_75174751_75174824_75181056_75181189_75182813
transcript_63020.known	chr17	-	809	3	FSM	ENSG00000188612.12	ENST00000314523.7	809	3	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	1678.5	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACGTAGCTGTTACA	-75113103	True	NA	49	True	NA	NA	NA	75182956	75167867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75168402_75181056_75181189_75182813
transcript_63023.known	chr17	+	2010	18	FSM	ENSG00000125450.11	ENST00000579324.5	2010	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	125.74483967894	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTCTTAGAGTCCACCCA	75201304	True	NA	26	True	AATAAA	-18	NA	75205706	75235757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_63025.known	chr17	+	2133	19	FSM	ENSG00000125450.11	ENST00000245544.9	2133	19	0	0	0	0	multi-exon	FALSE	canonical	3	376	junction_7	59.1678925277286	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTCTTAGAGTCCACCCAG	75201276	True	NA	27	True	AATAAA	-19	NA	75205678	75235758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_63026.known	chr17	+	1890	18	FSM	ENSG00000125450.11	ENST00000579298.5	1890	18	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	123.906008578833	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTATCTTTGTATGGCA	75201317	True	NA	-40	True	NA	NA	NA	75205719	75235691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75218184_75218307_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75234789_75235099_75235202_75235577
transcript_63027.known	chr17	+	2233	17	FSM	ENSG00000125450.11	ENST00000581104.5	2233	17	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	123.203195347158	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTATATAGATTTTTTTA	75201317	True	NA	-21	True	NA	NA	NA	75205719	75235710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75205795_75208526_75208621_75209822_75209986_75211991_75212063_75213075_75213120_75215753_75215824_75225102_75225238_75225341_75225465_75225697_75225830_75226050_75226158_75231339_75231424_75231572_75231639_75231827_75231980_75232850_75232969_75233057_75233159_75234636_75235202_75235577
transcript_63028.known	chr17	-	3871	17	FSM	ENSG00000125447.18	ENST00000537686.6	3871	17	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_14	25.3475066574604	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252951	True	NA	-5	True	AATAAA	-16	NA	75261606	75236598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_63030.known	chr17	-	3766	16	FSM	ENSG00000125447.18	ENST00000538886.5	3766	16	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_13	68.0263347698685	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGAATCTTCCTAGTATA	-75252945	True	NA	-5	True	AATAAA	-16	NA	75261600	75236598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75246508_75246585_75246711_75246797_75261547
transcript_63036.known	chr17	-	855	6	FSM	ENSG00000125457.15	ENST00000580717.5	855	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_5	70.47666280408	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGAAGACAACGCCAGCTG	-75269933	True	NA	NA	False	NA	NA	NA	75271133	75266794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75270942
transcript_63040.known	chr17	+	864	5	FSM	ENSG00000125445.11	ENST00000583407.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	697.1801686078	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGAGGCTGGAACTTGCT	75249084	False	NA	48	True	AAGAAA	-39	NA	75261960	75266084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75261984_75262462_75262689_75262803_75262868_75263339_75263508_75265701
transcript_6305.known	chr1	+	905	9	FSM	ENSG00000172456.18	ENST00000474476.5	905	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	25.2904996985034	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATACTGTAATGCCAT	59296010	True	NA	NA	False	NA	NA	NA	59296837	59660293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_59296908_59346246_59346399_59378748_59378838_59456960_59457077_59512310_59512440_59554123_59554228_59607802_59607911_59625987_59626050_59660218
transcript_63051.known	chr17	+	1204	5	FSM	ENSG00000125445.11	ENST00000245539.11	1204	5	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_3	38.1141377968858	7247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGCTCTGCCTCCACCC	75249002	True	NA	49	True	TATAAA	-19	NA	75261878	75266376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339_75263508_75265701
transcript_63052.known	chr17	-	3670	18	FSM	ENSG00000125447.18	ENST00000649398.1	3670	18	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	77.1002134016138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAACCATTTTCACTG	-75252976	True	NA	-27	True	NA	NA	NA	75261631	75236620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75237778_75237981_75238390_75238651_75238763_75238913_75239084_75239374_75239572_75239788_75240109_75240341_75240413_75240811_75241058_75241399_75241517_75241614_75241697_75242335_75242474_75242830_75242912_75243062_75243167_75243446_75243571_75244618_75244718_75246508_75246585_75246711_75246797_75261547
transcript_63053.known	chr17	+	1638	4	FSM	ENSG00000125445.11	ENST00000579002.5	1638	4	0	0	0	0	multi-exon	FALSE	canonical	3	1592	junction_2	17.9876500843094	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTTGTCCTTATACAAAA	75249035	True	NA	3	True	NA	NA	NA	75261911	75266330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75262689_75262803_75262868_75263339_75263508_75265701
transcript_63054.known	chr17	+	1717	4	FSM	ENSG00000125445.11	ENST00000579761.5	1717	4	0	0	0	0	multi-exon	TRUE	canonical	3	1592	junction_3	42.1979462375442	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTTTTCTTGTGTTCTCC	75259542	True	NA	NA	False	NA	NA	NA	75261673	75264490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75261984_75262496_75262689_75262803_75262868_75263339
transcript_63055.known	chr17	-	1319	6	FSM	ENSG00000125457.15	ENST00000325102.13	1319	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	33.434114314574	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTTCCTTTATATATCCA	-75270031	True	NA	NA	False	AATAAA	-19	NA	75271231	75266227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75270113_75270246_75271143
transcript_63056.known	chr17	-	1419	7	FSM	ENSG00000125457.15	ENST00000579297.5	1419	7	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_5	62.651593932016	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTTTTCTGATACTAAAAC	-75270027	True	NA	NA	False	NA	NA	NA	75271227	75266246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269470_75270113_75270246_75271143
transcript_63057.known	chr17	-	1358	7	FSM	ENSG00000125457.15	ENST00000245551.9	1358	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	69.8593825719447	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACTGCTTCCTTTATAT	-75269973	True	NA	NA	False	AATAAA	-14	NA	75271173	75266232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75266968_75267537_75267631_75267745_75267902_75268082_75268193_75269346_75269449_75270113_75270246_75271143
transcript_63062.known	chr17	-	1630	8	FSM	ENSG00000125454.12	ENST00000416858.7	1630	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	64.3948280341754	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-75286973	True	NA	-16	True	ATTAAA	-13	NA	75289433	75272991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288501_75288592_75289353
transcript_63065.known	chr17	-	1496	7	FSM	ENSG00000125454.12	ENST00000442286.6	1496	7	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_6	46.8780924905819	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCCTTATCTTACTCCATC	-75286930	True	NA	-17	True	ATTAAA	-12	NA	75289390	75272992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75289353
transcript_63068.nic	chr17	-	1367	6	NIC	ENSG00000125454.12	novel	1630	8	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_5	64.2669432912442	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTATCTTACTCCATCT	-75286970	True	NA	-16	True	ATTAAA	-13	NA	75289430	75272991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75289353
transcript_6307.nnic	chr1	+	727	6	NNC	ENSG00000172456.18	novel	623	3	NA	NA	-6851	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.1694021440333	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAATTAGAGTCTTCATT	59653350	True	NA	8	True	AATAAA	-19	NA	59653367	59762724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_59653520_59660218_59660294_59667282_59667404_59674038_59674134_59757930_59757993_59762502
transcript_63080.known	chr17	-	1554	8	FSM	ENSG00000125454.12	ENST00000580994.5	1554	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	43.4638014998266	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCCAACCTATTTAATAGAC	-75286951	True	NA	-54	True	NA	NA	NA	75289411	75273029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75273640_75277352_75277484_75278151_75278336_75283422_75283594_75286303_75286460_75286632_75286803_75288387_75288462_75289353
transcript_63082.known	chr17	-	3273	6	FSM	ENSG00000177885.15	ENST00000316804.10	3273	6	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_5	74.4859718336278	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75388986	True	NA	-6	True	AATAAA	-19	NA	75405678	75318075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550_75393766_75405488
transcript_63084.known	chr17	-	3182	5	FSM	ENSG00000177885.15	ENST00000392564.5	3182	5	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_2	45.985731482711	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75391775	True	NA	-6	True	AATAAA	-19	NA	75393864	75318075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75320554_75321658_75321828_75325897_75326021_75332699_75332798_75393550
transcript_63085.known	chr17	-	3181	5	FSM	ENSG00000177885.15	ENST00000316615.9	3181	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	349.933118609828	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGTATCTTTTTTTCCCC	-75389017	True	NA	-6	True	AATAAA	-19	NA	75405709	75318075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75320554_75321658_75321828_75332699_75332798_75393550_75393766_75405488
transcript_63091.known	chr17	-	1612	10	FSM	ENSG00000177303.10	ENST00000581870.1	1612	10	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_9	11.7378779077727	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGTAGTGGAGCTGTGAT	-75512635	True	NA	NA	False	AATAAA	-43	NA	75515440	75505318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75505652_75505820_75505930_75506304_75506414_75506582_75506714_75506798_75506895_75506983_75507130_75507583_75507682_75508233_75508286_75513710_75514209_75515400
transcript_63101.known	chr17	+	1374	10	FSM	ENSG00000073350.14	ENST00000375227.8	1374	10	0	0	0	0	multi-exon	FALSE	canonical	3	399	junction_6	40.2044159481069	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCACGTACCTG	75523639	True	NA	9	True	AATAAA	-12	NA	75525731	75564721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75525826_75543396_75543502_75556045_75556144_75558154_75558237_75558511_75558628_75559251_75559411_75563015_75563179_75563330_75563464_75563751_75563807_75564352
transcript_63102.known	chr17	+	543	4	FSM	ENSG00000073350.14	ENST00000577211.1	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	23.2522400354604	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGGTCCACTACTTTAAT	75574123	False	NA	8	True	AATAAA	-16	NA	75574153	75575207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75574261_75574452_75574496_75574609_75574669_75574873
transcript_63106.known	chr17	-	1749	9	FSM	ENSG00000108469.15	ENST00000340830.9	1749	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	50.3506454774911	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTGTGTGTTTTTAT	-75664702	True	NA	6	True	AAAAAG	-21	NA	75667189	75650358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75650719_75651185_75651266_75658297_75658461_75660954_75661067_75661605_75661709_75662478_75662998_75665050_75665173_75666427_75666572_75667043
transcript_63111.known	chr17	+	1000	12	FSM	ENSG00000161526.15	ENST00000583536.5	1000	12	0	0	0	0	multi-exon	FALSE	canonical	2	59	junction_3	262.816845378823	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGACCGTGCAGCCCAGT	75655969	True	NA	NA	False	NA	NA	NA	75667425	75706545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75690670_75690773_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_63116.known	chr17	+	1558	11	FSM	ENSG00000161526.15	ENST00000580322.5	1558	11	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_9	225.682542523785	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGGCATCTCAGATG	75655917	True	NA	14	True	ATTAAA	-15	NA	75667373	75706756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75705610_75706093_75706339
transcript_63117.known	chr17	+	2500	11	FSM	ENSG00000161526.15	ENST00000584667.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	701	junction_9	35.5084496986281	1239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTTGTTGGCTAAAT	75655881	True	NA	23	True	TATAAA	-18	NA	75667337	75708059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_6312.known	chr1	+	5713	22	FSM	ENSG00000134709.13	ENST00000371208.5	5713	22	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_17	26.0372139050342	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAATAGTTGTGAAATGAT	59811432	True	NA	10	True	AATAAA	-18	NA	59814948	59876322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_59815181_59821857_59821944_59828779_59828853_59832162_59832214_59833404_59833538_59835344_59835413_59836872_59836936_59840307_59840392_59843431_59843599_59847044_59847186_59848314_59848517_59849072_59849184_59858427_59858516_59858984_59859046_59860187_59860329_59862783_59862878_59864631_59864667_59865162_59865246_59865871_59865973_59868249_59868352_59871041_59871111_59872794
transcript_63123.known	chr17	+	2409	10	FSM	ENSG00000161526.15	ENST00000582022.5	2409	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_6	214.504827422728	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGTTGGCTAAATCCA	75655914	True	NA	26	True	TATAAA	-21	NA	75667370	75708062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_63125.known	chr17	+	2439	10	FSM	ENSG00000161526.15	ENST00000355423.7	2439	10	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	188.661039047072	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCAGTGTTTTTTGTTGGC	75655889	True	NA	18	True	TATAAA	-13	NA	75667345	75708054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75693439_75693483_75699782_75699872_75702479_75702572_75703310_75703372_75703807_75703860_75704755_75704815_75706007_75706093_75706339
transcript_63127.known	chr17	+	1011	9	FSM	ENSG00000161526.15	ENST00000542343.5	1011	9	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_6	241.118228261573	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTCTGTCCACGCACCACC	75655899	True	NA	-41	True	NA	NA	NA	75667355	75706701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75667479_75668515_75668626_75671815_75671864_75693439_75693483_75699782_75699872_75702479_75702572_75704755_75704815_75706007_75706093_75706339
transcript_6313.known	chr1	-	1879	9	FSM	ENSG00000134716.11	ENST00000371204.4	1879	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	2.521780125229	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCCTCCTTCCTGCTTC	-59926667	True	NA	NA	False	CATAAA	-26	NA	59926773	59893307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_59893830_59900964_59901104_59904870_59905059_59907785_59907928_59909783_59909961_59911607_59911769_59912161_59912312_59915937_59916101_59926536
transcript_63131.known	chr17	-	1397	8	FSM	ENSG00000108479.13	ENST00000588479.6	1397	8	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_2	33.2430750806288	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGGGATGTCAGAACCGCT	-75762885	True	NA	30	True	NA	NA	NA	75765192	75757893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75758128_75758209_75758373_75758448_75758600_75762703_75762886_75763013_75763150_75763319_75763440_75763896_75764087_75764971
transcript_63132.known	chr17	-	465	2	FSM	ENSG00000108479.13	ENST00000586733.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	291	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGTGCTCAATAAACTTGT	-75758372	False	NA	-48	True	NA	NA	NA	75758518	75757971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75758128_75758209
transcript_63137.known	chr17	+	1312	4	FSM	ENSG00000132478.10	ENST00000586527.1	1312	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	2.62466929133727	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTCTGTTTTTATTTCAG	75782199	True	NA	14	True	ATTAAA	-27	NA	75784854	75794198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75784985_75791759_75792020_75792312_75792479_75793442
transcript_6315.known	chr1	-	1321	4	FSM	ENSG00000226476.7	ENST00000668078.1	1321	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.10960933531265	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTAGTTTATGGTAATT	-60640379	True	NA	NA	False	AATAAA	-15	NA	60640489	60595510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_60596374_60600126_60600251_60640010_60640127_60640271
transcript_63156.known	chr17	+	984	3	FSM	ENSG00000132478.10	ENST00000587501.1	984	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	66.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATTGAAGTAAGAGTACTT	75782193	True	NA	8	True	ATTAAA	-22	NA	75784848	75794124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75784985_75792312_75792479_75793442
transcript_6316.known	chr1	-	1360	4	FSM	ENSG00000226476.7	ENST00000663215.1	1360	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACTAGTTTATGGTAATTT	-60640397	True	NA	NA	False	AATAAA	-16	NA	60640507	60595509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_60596374_60600126_60600271_60640010_60640127_60640271
transcript_63162.known	chr17	-	795	4	FSM	ENSG00000132475.10	ENST00000592643.5	795	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	7083.37692535606	1302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTTTAACAATTGG	-75701957	True	NA	-27	True	AATAAA	-17	NA	75779758	75778249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778882_75778964_75779046_75779185_75779656
transcript_63163.known	chr17	-	842	2	FSM	ENSG00000132475.10	ENST00000589949.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGACTGTTCACAGACCT	-75701965	True	NA	35	True	NA	NA	NA	75779766	75778452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75779185_75779656
transcript_63164.known	chr17	-	576	4	FSM	ENSG00000132475.10	ENST00000589599.5	576	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7625.40547555779	1092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGTAGTAAATTCTGTAA	-75701979	True	NA	-33	True	NA	NA	NA	75779780	75778573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778809_75778964_75779046_75779185_75779646
transcript_63165.known	chr17	-	551	3	FSM	ENSG00000132475.10	ENST00000587560.5	551	3	0	0	0	0	multi-exon	FALSE	canonical	3	15953	junction_2	218.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAATTCTGTAAAATACTT	-75779271	False	NA	-26	True	NA	NA	NA	75779286	75778566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778809_75778964_75779046
transcript_63166.known	chr17	-	586	3	FSM	ENSG00000132475.10	ENST00000587171.1	586	3	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_2	1034	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATCCAGTTGGCTCGCC	-75701977	True	NA	-97	True	NA	NA	NA	75779778	75778637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778964_75779046_75779185_75779656
transcript_63167.known	chr17	+	549	2	FSM	ENSG00000132478.10	ENST00000589790.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGGTCAAGAGTGATGACA	75782186	True	NA	NA	False	NA	NA	NA	75784841	75792165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75784985_75791759
transcript_63168.known	chr17	-	575	3	FSM	ENSG00000132475.10	ENST00000589417.1	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	13885	junction_2	1252.5	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCCCAAAGACATCCAGT	-75701978	True	NA	-106	True	NA	NA	NA	75779779	75778646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75778724_75778809_75779185_75779656
transcript_63170.nic	chr17	-	1790	9	NIC	ENSG00000092929.12	novel	4080	32	NA	NA	-67	0	intron_retention	FALSE	canonical	3	15	junction_8	19.4482486358027	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCCTTTGGCCTACAGTG	NA	False	NA	-1	True	AATAAA	-25	NA	75833336	75827224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_75828087_75828786_75828984_75830027_75830152_75830361_75830483_75830577_75830662_75831097_75831170_75831242_75831349_75832965_75833046_75833192
transcript_63177.nnic	chr17	+	1282	3	Antisense	novelGene_ENSG00000092929.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	1	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGCTTCTCTGTTTTAAAT	75830542	True	NA	7	True	AATACA	-19	NA	75830603	75833433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_75830747_75831248_75831316_75832361
transcript_63182.known	chr17	-	2225	9	FSM	ENSG00000132471.12	ENST00000591399.5	2225	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	157.071639706218	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAAATGAAATAACTGG	NA	False	NA	12	True	AATAAA	-41	NA	75856507	75845719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238_75855477_75856261
transcript_63183.known	chr17	-	1374	9	FSM	ENSG00000132471.12	ENST00000588373.5	1374	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	191.306527593807	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCAGACCCTGCTCAC	-75846648	True	NA	NA	False	NA	NA	NA	75855309	75846322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75852655_75852821_75855238
transcript_63185.known	chr17	-	1895	8	FSM	ENSG00000132471.12	ENST00000585462.5	1895	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	153.254623394652	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATAACTGGACCCTTTCTGG	-75846661	True	NA	-16	True	AGTAAA	-6	NA	75855322	75845708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855179
transcript_63186.known	chr17	-	1745	8	FSM	ENSG00000132471.12	ENST00000590221.5	1745	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.944790425574	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTGAAATAAACCCTGTTT	-75846645	True	NA	-40	True	AATATA	-4	NA	75855306	75845771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847598_75847795_75847931_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_6319.nnic	chr1	-	712	3	NNC	ENSG00000226476.7	novel	1798	8	NA	NA	6	-43144	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTCATTTGGGATTAA	-60640366	True	NA	NA	False	AATACA	-14	NA	60640476	60638660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_60639052_60640010_60640127_60640271
transcript_63190.known	chr17	-	928	7	FSM	ENSG00000132471.12	ENST00000433525.6	928	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	176.457501965771	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCTCTTCTGGGAGCACG	-75846674	True	NA	NA	False	NA	NA	NA	75855335	75846494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75846788_75846907_75846985_75847486_75847610_75848569_75848663_75849603_75849740_75851567_75851677_75855238
transcript_63193.known	chr17	-	574	2	FSM	ENSG00000132471.12	ENST00000592802.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAGTAAACAGGGTACAGT	-75846674	True	NA	NA	False	NA	NA	NA	75855335	75851199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75851677_75855238
transcript_63194.known	chr17	-	2269	6	FSM	ENSG00000132481.7	ENST00000254816.6	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	3.16227766016838	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCCTTTTCCATCCTCT	-75878420	True	NA	NA	False	AATAAA	-16	NA	75878581	75874163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75875124_75875399_75875475_75875900_75876100_75876261_75876493_75876717_75876814_75877873
transcript_63197.known	chr17	-	3384	6	FSM	ENSG00000141569.12	ENST00000269383.8	3384	6	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	12.5857061780418	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATACGTGTAATATACATA	-75896574	False	11358	-3	True	AATAAA	-15	NA	75896951	75888962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75891348_75891812_75891879_75892010_75892186_75892266_75892501_75892754_75892851_75896523
transcript_63203.known	chr17	-	1358	9	FSM	ENSG00000204316.13	ENST00000309352.4	1358	9	0	0	0	0	multi-exon	FALSE	canonical	3	1065	junction_1	59.9979166304964	1514	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGGCTCACACCTGTA	-75893526	True	NA	-3	True	AATAAA	-18	NA	75904884	75898643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75898987_75899157_75899295_75899515_75899675_75900981_75901028_75901200_75901274_75901711_75901921_75902019_75902155_75904539_75904720_75904808
transcript_63216.known	chr17	-	621	2	FSM	ENSG00000188878.20	ENST00000586631.2	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTGGTGCTCTTGCCTCTGG	-75939405	False	NA	NA	False	CATAAA	-22	NA	75940947	75937711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75938233_75940847
transcript_63217.known	chr17	-	7317	14	FSM	ENSG00000161533.12	ENST00000293217.10	7317	14	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_12	26.8398714271297	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGACTTAATCTTTTTGTG	-75976100	True	NA	0	True	AATAAA	-39	NA	75979166	75941506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75960214_75960376_75978533_75978694_75978964
transcript_63223.known	chr17	-	308	2	FSM	ENSG00000161533.12	ENST00000592329.1	308	2	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCATCACCGTGCTTGGT	-75979020	False	NA	NA	False	NA	NA	NA	75979045	75978466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75978694_75978964
transcript_63224.known	chr17	-	2215	14	FSM	ENSG00000161533.12	ENST00000301608.8	2215	14	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	22.1736023021352	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTAAGTGCAATTAACA	-75976068	True	NA	NA	False	ATTAAA	-15	NA	75979134	75946576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_75946796_75948250_75948458_75949216_75949361_75949494_75949601_75949717_75949898_75950773_75950965_75951414_75951578_75953450_75953621_75955565_75955682_75955827_75955948_75957458_75957567_75973624_75973786_75978533_75978694_75978964
transcript_63232.known	chr17	+	3287	10	FSM	ENSG00000261408.7	ENST00000569284.1	3287	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_4	77.0076154643563	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTGATTGTTCTGCTCA	75976676	True	NA	19	True	AATAAA	-22	NA	75979259	76005999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140_76001542_76001873_76001952_76002021_76002143_76002247_76002419_76002510_76002613_76003194_76003399_76005297
transcript_63238.known	chr17	+	862	4	FSM	ENSG00000257949.7	ENST00000588202.5	862	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	112.436648829463	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGGCCATGGAGGGTT	75976657	True	NA	-54	True	NA	NA	NA	75979240	76000521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991578_76000140
transcript_63239.known	chr17	+	974	4	FSM	ENSG00000257949.7	ENST00000397640.6	974	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_3	3.29983164553722	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTCGTGGTGCAGCGC	75976656	True	NA	11	True	AATAAA	-24	NA	75979239	76000586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_75979512_75986186_75986285_75991465_75991624_76000140
transcript_63243.known	chr17	-	2124	20	FSM	ENSG00000182473.22	ENST00000634349.1	2124	20	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_13	214.956866123483	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGCTGCTAGCCCTGCCT	-76091272	True	NA	-97	True	NA	NA	NA	76103692	76083647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76090328_76090398_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_63245.known	chr17	-	4782	19	FSM	ENSG00000182473.22	ENST00000589210.6	4782	19	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	184.396981845095	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGGAGGGAGAAGTGGTC	-76091367	True	NA	-35	True	AATAAA	-20	NA	76103787	76081015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76091142_76091236_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_63246.known	chr17	-	4596	18	FSM	ENSG00000182473.22	ENST00000332065.9	4596	18	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_12	61.2463966880211	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGATGGAGGGAGAAGTGGT	-76091275	True	NA	-36	True	AATAAA	-19	NA	76103695	76081016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76083751_76084005_76084140_76084247_76084290_76084516_76084581_76085313_76085410_76085676_76085798_76086079_76086146_76087653_76087721_76088059_76088123_76088463_76088563_76088770_76088924_76089174_76089321_76094413_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_63250.known	chr17	-	2831	16	FSM	ENSG00000167881.15	ENST00000307877.7	2831	16	0	0	0	0	multi-exon	FALSE	canonical	3	839	junction_9	85.4119429588158	349	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGACACTTAACGATTCCC	-76060789	True	NA	-6	True	AATAAA	-18	NA	76072517	76038784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76039934_76040418_76040475_76040902_76040979_76043828_76043959_76045291_76045387_76046037_76046195_76047905_76047971_76050427_76050527_76057402_76057544_76060307_76060391_76061109_76061220_76061491_76061575_76063975_76064172_76067216_76067331_76070377_76070445_76072307
transcript_63256.known	chr17	-	718	4	FSM	ENSG00000182473.22	ENST00000406660.4	718	4	0	0	0	0	multi-exon	FALSE	canonical	3	693	junction_1	20.7257220756131	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGTTGTTGTTGTTGTTG	-76091314	True	NA	NA	False	ATTAAA	-37	NA	76103734	76101011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76101377_76101678_76101864_76103360_76103427_76103632
transcript_63257.known	chr17	-	2958	6	FSM	ENSG00000182473.22	ENST00000405068.3	2958	6	0	0	0	0	multi-exon	FALSE	canonical	3	583	junction_1	63.2626271980543	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-76091323	True	NA	NA	False	NA	NA	NA	76103743	76092314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76094582_76097795_76098019_76101270_76101377_76101678_76101864_76103360_76103427_76103632
transcript_6326.nic	chr1	-	1114	8	NIC	ENSG00000162604.12	novel	1250	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	non_canonical	0	0	junction_7	140.225183333153	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721217	True	NA	-4	True	AATAAA	-18	NA	61725156	61681045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_61681351_61683416_61683547_61686791_61686922_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723785_61724954
transcript_63260.known	chr17	-	2587	3	FSM	ENSG00000129654.8	ENST00000322957.7	2587	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	9.5	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGGACCTGCTCAAAACTT	-76141034	True	NA	-4	True	AATAAA	-18	NA	76141245	76136332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76138121_76139897_76140565_76141113
transcript_63261.known	chr17	+	660	2	FSM	ENSG00000185262.9	ENST00000589240.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGGAGGGCAGGGGGTTT	76265681	False	NA	-88	True	NA	NA	NA	76265702	76270586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76265970_76270193
transcript_63263.known	chr17	-	3435	10	FSM	ENSG00000161542.17	ENST00000446526.8	3435	10	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_1	51.0412566121095	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTCTCAATTGTTAAC	-76348839	True	NA	NA	False	NA	NA	NA	76353916	76309477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_63264.known	chr17	-	1678	10	FSM	ENSG00000161542.17	ENST00000324684.8	1678	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	167.062714623233	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTAGTCTTTTCATTAG	NA	False	NA	-43	True	AATAAA	-13	NA	76354198	76310933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76311701_76312869_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76354116
transcript_63271.nic	chr17	-	1080	9	ISM	ENSG00000161542.17	ENST00000446526.8	3435	10	209	3315	-79	0	5prime_fragment	FALSE	canonical	3	484	junction_4	38.7233779518265	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCTTAATCTGTCTAT	-76348630	False	NA	NA	False	AATAAA	-18	NA	76353707	76312792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_76313017_76313820_76313892_76328716_76328863_76330042_76330099_76330550_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_63274.known	chr17	-	572	5	FSM	ENSG00000161542.17	ENST00000494662.5	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	498	junction_1	38.2916439970916	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCGTTACTGGAAGGCA	-76348551	False	5077	NA	False	NA	NA	NA	76353628	76330482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76330667_76332262_76332436_76344670_76344738_76348528_76348582_76353533
transcript_63275.nic	chr17	+	1399	4	ISM	ENSG00000176170.14	ENST00000392496.3	1779	5	708	2	-23	0	3prime_fragment	FALSE	canonical	2	13	junction_3	3.29983164553722	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCTCGTCCTGTCCTGG	76385980	True	NA	2	True	AATAAA	-13	NA	76385999	76387855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_76386138_76386220_76386316_76386392_76386509_76386805
transcript_63277.known	chr17	-	3511	19	FSM	ENSG00000129667.13	ENST00000675367.1	3511	19	0	0	0	0	multi-exon	TRUE	canonical	2	33	junction_12	16.7416830282168	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATTGTCTTTAACGGAG	-76499417	True	NA	-13	True	ATTAAA	-18	NA	76501423	76470895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76472053_76472685_76472840_76473004_76473106_76473251_76473328_76473647_76473743_76473838_76473903_76474032_76474143_76474372_76474535_76474729_76474805_76475029_76475142_76476829_76477025_76477179_76477299_76477656_76477786_76478805_76479010_76479081_76479278_76479732_76479855_76481374_76481546_76487711_76487910_76501352
transcript_63282.known	chr17	+	504	2	FSM	ENSG00000214140.11	ENST00000587813.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAACCTCAATATTCTAA	76540444	False	NA	15	True	AATAAA	-27	NA	76540535	76553574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76540574_76553108
transcript_63284.known	chr17	+	989	5	FSM	ENSG00000163597.16	ENST00000586942.7	993	5	3	1	0	-1	multi-exon	FALSE	canonical	3	62	junction_1	710.090487191597	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGGTGTCTCCGCAGA	76516831	True	NA	9	True	GATAAA	-4	NA	76557768	76563581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76558373_76558601_76558944_76559044_76561287_76561399_76563118
transcript_63288.known	chr17	+	2620	4	FSM	ENSG00000163597.16	ENST00000587838.2	2620	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_1	828.516076421507	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTACCGTCAGCTGAGTTCA	76516858	True	NA	19	True	AATAAA	-9	NA	76557795	76565338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76558373_76558601_76561287_76561399_76563118
transcript_63289.known	chr17	+	84	1	FSM	ENSG00000199961.1	ENST00000363091.1	84	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCCCAAGTTTGCCTTACA	76561098	False	NA	NA	False	AAGAAA	-38	NA	76561108	76561192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76561100_76561200
transcript_63290.known	chr17	+	556	2	FSM	ENSG00000163597.16	ENST00000591956.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	1194	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTTCCCTCAGCATAT	76516828	True	NA	NA	False	NA	NA	NA	76557765	76561751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76561287
transcript_63291.known	chr17	+	2407	3	FSM	ENSG00000163597.16	ENST00000493536.7	2437	3	3	27	0	-17	multi-exon	FALSE	canonical	3	56	junction_2	569	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACAATAAACTTGGGAAACT	76516831	True	NA	2	True	NA	NA	NA	76557768	76565321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76557858_76561287_76561403_76563118
transcript_63292.known	chr17	-	1950	5	FSM	ENSG00000182534.14	ENST00000375036.6	1950	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	202.488734254526	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACTGTGTGTTTTTTCAGT	-76707036	True	NA	-4	True	AATAAA	-21	NA	76711004	76679568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76680880_76683846_76683928_76685071_76685166_76688112_76688177_76710604
transcript_63293.known	chr17	-	5661	4	FSM	ENSG00000182534.14	ENST00000355797.7	5661	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	203.454062519173	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGTGCAAGTTTACTTT	-76706987	True	NA	NA	False	AATAAA	-24	NA	76710955	76672550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76677703_76685071_76685166_76688112_76688177_76710604
transcript_63294.known	chr17	-	1833	4	FSM	ENSG00000182534.14	ENST00000449428.7	1833	4	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_1	38.3869190682914	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTTTTTTCAGTTTG	-76706997	True	NA	-1	True	AATAAA	-24	NA	76710965	76679565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76680880_76685071_76685166_76688112_76688177_76710604
transcript_63295.known	chr17	+	1717	1	FSM	ENSG00000261335.1	ENST00000565271.1	1717	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGTCTTAGTATAATTAC	76671823	True	NA	4	True	AATAAA	-16	NA	76671941	76673658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76671900_76673700
transcript_63296.known	chr17	-	1898	7	FSM	ENSG00000070495.15	ENST00000542934.5	1898	7	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	75.0570153653578	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATGTTTTCCTTTGAGAA	-76726770	False	NA	-24	True	AATAAA	-24	NA	76726784	76718445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76718861_76720359_76720499_76721262_76721357_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_6330.known	chr1	-	921	8	FSM	ENSG00000162604.12	ENST00000488206.5	921	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	132.600828020932	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTGTTGAGTTAA	-61721174	True	NA	NA	False	NA	NA	NA	61725113	61681244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724287_61724426_61724901
transcript_63301.known	chr17	-	1621	6	FSM	ENSG00000070495.15	ENST00000397625.9	1621	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_3	11.0526015037185	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGAAATGTTTTCCTTT	-76724383	True	NA	-29	True	AATAAA	-19	NA	76726606	76718450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76718861_76720359_76720499_76721797_76721934_76723771_76724059_76725466_76725856_76726346
transcript_63312.known	chr17	+	2538	14	FSM	ENSG00000092931.12	ENST00000336509.8	2538	14	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	17.1974265310232	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAATGATAATTTTTTAAAA	76737108	False	NA	NA	False	AAAAAG	-12	NA	76737700	76779286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76737884_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_63316.known	chr17	+	1891	14	FSM	ENSG00000092931.12	ENST00000590514.5	1891	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	12.5320889893852	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAGTATGTTTTGCCATGT	76737851	True	NA	16	True	TATAAA	-16	NA	76738070	76778727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76738166_76738281_76738449_76738937_76738994_76740956_76741065_76741968_76742049_76742176_76742274_76743397_76743457_76744321_76744467_76754046_76754088_76767385_76767452_76769745_76769872_76774996_76775172_76776405_76776542_76778187
transcript_63328.nic	chr17	+	877	5	NIC	ENSG00000181038.14	novel	1059	6	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	85.5467708332699	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76726780	False	NA	NA	False	ATTAAA	-17	NA	76726794	76733880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_63330.known	chr17	+	1184	5	FSM	ENSG00000181038.14	ENST00000588783.5	1184	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	80.7480649922956	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACAACCTCAAGAAAAGTGC	76724407	True	NA	NA	False	ATTAAA	-32	NA	76726842	76733936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733382_76733520
transcript_63332.known	chr17	+	925	5	FSM	ENSG00000181038.14	ENST00000588302.5	925	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	88.7338013386105	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724415	True	NA	NA	False	ATTAAA	-17	NA	76726850	76733880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76726880_76726969_76727179_76732977_76733216_76733292_76733382_76733520
transcript_63334.known	chr17	+	1171	5	FSM	ENSG00000181038.14	ENST00000615984.4	1171	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	86.1521183720981	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGGATTGTTCCTTAGTC	76724394	True	NA	NA	False	ATTAAA	-16	NA	76726829	76733879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727214_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_63337.known	chr17	+	617	4	FSM	ENSG00000181038.14	ENST00000589977.5	617	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	86.1484506857526	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTGCTGACTGGTCACTT	76724394	True	NA	NA	False	TTTAAA	-19	NA	76726829	76733516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292
transcript_63340.nic	chr17	+	769	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_3	99.0084171505972	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76726783	False	NA	NA	False	ATTAAA	-17	NA	76726797	76733880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_76726880_76732977_76733216_76733292_76733382_76733520
transcript_63343.nic	chr17	+	1034	4	NIC	ENSG00000181038.14	novel	925	5	NA	NA	2	0	intron_retention	FALSE	canonical	3	10	junction_3	92.1315484631742	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724396	True	NA	NA	False	ATTAAA	-17	NA	76726831	76733880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_76727179_76732977_76733216_76733292_76733382_76733520
transcript_63348.known	chr17	+	585	3	FSM	ENSG00000181038.14	ENST00000591571.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	104	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACAAAGAAGATATAGCAG	76724403	True	NA	NA	False	NA	NA	NA	76726838	76733598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76726880_76732977_76733216_76733292
transcript_6336.nic	chr1	-	1032	7	NIC	ENSG00000162604.12	novel	921	8	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	105.651549917642	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721224	True	NA	-4	True	AATAAA	-18	NA	61725163	61681045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
transcript_63360.known	chr17	+	1006	4	FSM	ENSG00000181038.14	ENST00000590964.5	1006	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	95.2272136640689	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGGATTGTTCCTTAGT	76724418	True	NA	NA	False	ATTAAA	-15	NA	76726853	76733878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727179_76732977_76733216_76733292_76733378_76733520
transcript_63361.known	chr17	+	1128	5	FSM	ENSG00000181038.14	ENST00000341249.11	1128	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	83.2856530261965	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGATTGTTCCTTAGTCA	76724403	True	NA	NA	False	ATTAAA	-17	NA	76726838	76733880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727179_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_63362.known	chr17	+	581	5	FSM	ENSG00000181038.14	ENST00000588563.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	87.746794813258	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAAATGCTGGTCATTT	76724414	True	NA	NA	False	NA	NA	NA	76726849	76733643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76726880_76729689_76729795_76732977_76733216_76733292_76733378_76733520
transcript_63363.known	chr17	-	1888	3	FSM	ENSG00000161547.17	ENST00000359995.10	1888	3	0	0	0	0	multi-exon	FALSE	canonical	3	1780	junction_1	96.5	2911	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCTCGGTCTTTTTTTC	-76654137	True	NA	-4	True	ATTAAA	-31	NA	76737331	76734114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76735159_76736153_76736465_76736798
transcript_63364.known	chr17	-	1518	3	FSM	ENSG00000161547.17	ENST00000582449.5	1518	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	25.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTTTCTTGGTGTTAG	-76736230	False	NA	-36	True	NA	NA	NA	76736555	76734146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76735159_76735771_76735876_76736153
transcript_63365.known	chr17	+	904	4	FSM	ENSG00000181038.14	ENST00000586752.5	904	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	95.5207947110064	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CACACAAACTATGAGCAGAC	76724415	True	NA	NA	False	NA	NA	NA	76726850	76733738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_76727214_76732977_76733216_76733292_76733378_76733520
transcript_63367.known	chr17	-	610	3	FSM	ENSG00000267568.6	ENST00000564292.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAACCCGGGGACCCCGGCTG	-76969136	False	NA	NA	False	NA	NA	NA	76969156	76950473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76950560_76963892_76964144_76968883
transcript_63369.nnic	chr17	-	793	3	NNC	ENSG00000267568.6	novel	610	3	NA	NA	-43	629	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAGTTTATTCATTAATT	-76969179	True	NA	NA	False	NA	NA	NA	76969199	76962262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_76962489_76963892_76964144_76968883
transcript_6337.known	chr1	-	1248	7	FSM	ENSG00000162604.12	ENST00000371180.6	1248	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	111.157545852722	1229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATTTTTAGTGCTTTGTTA	NA	False	NA	-7	True	AATAAA	-15	NA	61725423	61681048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_63370.known	chr17	-	623	3	FSM	ENSG00000267568.6	ENST00000563583.1	623	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCATGTATTAAATATTTG	-76969077	False	NA	NA	False	NA	NA	NA	76969097	76962891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_76963050_76963892_76964144_76968883
transcript_63374.known	chr17	+	5500	17	FSM	ENSG00000129657.16	ENST00000436233.9	5500	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_4	15.8922150753128	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTTTTCTTATTGT	77135932	True	NA	NA	False	AATAAA	-21	NA	77140968	77217101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_63378.nic	chr17	+	813	6	ISM	ENSG00000129657.16	ENST00000436233.9	5500	17	-65	23552	-28	0	5prime_fragment	FALSE	canonical	3	162	junction_4	12.0764233115604	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGTATCTTGGGATTT	77135867	True	NA	NA	False	ATTAAA	-4	NA	77140903	77193549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_77141108_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420
transcript_63382.known	chr17	+	437	3	FSM	ENSG00000129657.16	ENST00000588696.5	437	3	0	0	0	0	multi-exon	FALSE	canonical	3	189	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGCACCTCAGGGTAAT	77136033	False	NA	NA	False	AATAAA	-17	NA	77141069	77143860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141108_77142645_77142751_77143566
transcript_63384.known	chr17	+	2712	17	FSM	ENSG00000129657.16	ENST00000585618.5	2712	17	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	46.879124818516	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGATATTGATGCAAAAAATT	77135895	True	NA	4	True	ATTAAA	-17	NA	77140931	77214329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77141055_77142645_77142751_77143566_77143660_77190802_77190953_77191180_77191313_77193420_77193550_77194676_77194912_77196201_77196312_77200483_77200674_77203569_77203659_77205275_77205347_77206228_77206401_77206727_77206863_77209341_77209477_77211949_77212202_77213313_77213493_77213917
transcript_63386.known	chr17	+	1338	4	FSM	ENSG00000234912.12	ENST00000566583.5	1338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.1107279647928	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	77086994	True	NA	3	True	AATAAA	-13	NA	77088748	77094983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77094069
transcript_63387.known	chr17	+	1849	4	FSM	ENSG00000234912.12	ENST00000650557.1	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	14.2361043360417	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTTTGGGAGGCCAAGGC	77086911	True	NA	NA	False	NA	NA	NA	77088665	77099506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77098164
transcript_63390.known	chr17	+	603	4	FSM	ENSG00000234912.12	ENST00000561633.5	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	14.2361043360417	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTATTGAATTAAAATAA	77086994	True	NA	NA	False	AAAACA	-9	NA	77088748	77099196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243_77093348_77099017
transcript_63392.known	chr17	+	2185	3	FSM	ENSG00000234912.12	ENST00000434411.6	2185	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	2	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGACTCGTTCTCCTGTGTG	NA	False	NA	10	True	AATAAA	-20	NA	77088630	77094990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77093243
transcript_63394.known	chr17	+	1187	3	FSM	ENSG00000234912.12	ENST00000648740.1	1187	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	16	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTTTTTTTTAAC	77087012	True	NA	NA	False	AATAAA	-14	NA	77088766	77099902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77099017
transcript_63395.nnic	chr17	+	1114	3	NNC	ENSG00000234912.12	novel	849	2	NA	NA	0	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTACTGACTCGTTCTCCTG	77086896	True	NA	6	True	AATAAA	-16	NA	77088650	77094986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_77088950_77089152_77089725_77094743
transcript_63396.known	chr17	+	849	2	FSM	ENSG00000234912.12	ENST00000366365.3	849	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATGATGAAACCCCATTTC	77087023	True	NA	NA	False	NA	NA	NA	77088777	77089829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152
transcript_63398.known	chr17	+	1234	3	FSM	ENSG00000234912.12	ENST00000565256.1	1234	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTACTGACTCGTTCTC	77086994	True	NA	3	True	AATAAA	-13	NA	77088748	77094983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77088950_77089152_77089272_77094069
transcript_63399.known	chr17	+	3733	12	FSM	ENSG00000184640.20	ENST00000427177.6	3733	12	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	198.768397973767	1068	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77277177	True	NA	26	True	AATAAA	-22	NA	77281498	77500593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77281555_77307140_77307198_77402058_77402704_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_63401.known	chr17	+	3026	10	FSM	ENSG00000184640.20	ENST00000541152.6	3026	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	183.175083215789	1056	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGCTCCTGAGTGAGAATG	77450689	False	NA	27	True	AATAAA	-23	NA	77450736	77500594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77450787_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_63402.known	chr17	+	1691	10	FSM	ENSG00000184640.20	ENST00000591088.5	1691	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	148.033029347432	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTCGCACTTGCAGAGGA	77451219	False	NA	NA	False	NA	NA	NA	77451243	77499024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_77451529_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_63403.nic	chr17	+	3142	10	NIC	ENSG00000184640.20	novel	817	6	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	109	junction_1	156.673837503345	1080	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGCTCCTGAGTGAGAAT	77460931	True	NA	26	True	AATAAA	-22	NA	77466393	77500593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_77466561_77482143_77482336_77487423_77487553_77488239_77488322_77488726_77488865_77490741_77490860_77492620_77492717_77492979_77493077_77497314_77497367_77498522
transcript_63410.known	chr17	-	8387	20	FSM	ENSG00000141524.17	ENST00000590602.6	8387	20	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_19	49.9735109888631	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCGATGCATGTTCTTCA	-78124593	True	NA	2	True	AATAAA	-22	NA	78128755	78107396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78128611
transcript_63412.known	chr17	-	2786	20	FSM	ENSG00000141524.17	ENST00000322914.7	2786	20	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_19	69.3272779513522	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGCTTGTCCCTTGGGGCTC	-78132268	False	NA	-16	True	ATTAAA	-15	NA	78132407	78112920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78113212_78113547_78113625_78117268_78117348_78117467_78117645_78117801_78117936_78118970_78119047_78119296_78119393_78120652_78120833_78121012_78121165_78121555_78121712_78122604_78122750_78123988_78124180_78124523_78124782_78124888_78124986_78125157_78125264_78125725_78125885_78126276_78126367_78126523_78126649_78126776_78126907_78132340
transcript_63416.known	chr17	+	1495	4	FSM	ENSG00000108639.8	ENST00000225777.8	1495	4	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	63.6465936943124	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGTCATTGGTTGAG	78159575	True	NA	15	True	AATAAA	-15	NA	78168580	78172720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78168716_78170816_78171055_78171509_78171650_78171738
transcript_63418.known	chr17	+	1553	3	FSM	ENSG00000108639.8	ENST00000588282.5	1553	3	0	0	0	0	multi-exon	FALSE	canonical	3	923	junction_2	77.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCTCCAGTCATTGGTTGA	78159605	True	NA	14	True	AATAAA	-14	NA	78168610	78172719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78168716_78170816_78171055_78171509
transcript_63419.known	chr17	+	2125	3	FSM	ENSG00000108639.8	ENST00000589168.1	2125	3	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_2	468	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGACAGTGCCTCTTCCTTCC	78159612	True	NA	NA	False	NA	NA	NA	78168617	78173527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78168716_78170816_78171055_78171738
transcript_63425.known	chr17	-	1431	7	FSM	ENSG00000167900.12	ENST00000301634.12	1431	7	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_1	77.2990225610188	3795	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTTGGTGGACGCACATT	-78179053	True	NA	NA	False	NA	NA	NA	78187052	78174090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78174951_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_63426.known	chr17	-	642	7	FSM	ENSG00000167900.12	ENST00000590862.5	642	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	414.593274587678	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCATGCTGCCCAGCCACT	-78179037	True	NA	NA	False	NA	NA	NA	78187036	78174701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78174789_78175049_78175170_78175528_78175619_78182588_78182683_78185054_78185166_78186786_78186819_78186928
transcript_63427.nic	chr17	+	1408	8	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_4	20.5038572777247	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179591	True	NA	9	True	AATAAA	-17	NA	78187325	78207701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204655_78204742_78204827_78204901_78205945_78206051_78206910
transcript_63428.nic	chr17	+	1322	7	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	21.4067746286076	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179591	True	NA	9	True	AATAAA	-17	NA	78187325	78207701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78204827_78204901_78205945_78206051_78206910
transcript_6343.nnic	chr1	-	933	6	NIC	ENSG00000162604.12	novel	969	7	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_5	117.880278248738	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTAGTGCTTTGTTATTG	-61721203	True	NA	-4	True	AATAAA	-18	NA	61725142	61681045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_61681351_61683416_61683547_61694696_61694771_61700933_61701026_61709328_61709438_61724919
transcript_63430.known	chr17	+	778	7	FSM	ENSG00000183077.16	ENST00000588199.5	778	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	21.5380799722001	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGAGCTGCCTCTTAGACTC	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205439_78205519_78205945_78206051_78206910
transcript_63434.nic	chr17	+	1249	6	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-32	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	16.3095064303001	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179591	True	NA	9	True	AATAAA	-17	NA	78187325	78207701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78205945_78206051_78206910
transcript_63436.nnic	chr17	+	1144	5	NIC	ENSG00000183077.16	novel	1700	11	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	22.1852991866236	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTGCTCGTTCATTTACG	78179591	True	NA	9	True	AATAAA	-17	NA	78187325	78207701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78187434_78190969_78191061_78202498_78202604_78202702_78202752_78206910
transcript_63437.known	chr17	+	647	5	FSM	ENSG00000183077.16	ENST00000588800.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	23.4560759719097	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGATGACGCTCAAAAGTA	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78202702_78202752_78205945_78206051_78206910
transcript_63442.nnic	chr17	+	586	3	NNC	ENSG00000183077.16	novel	578	3	NA	NA	-32	-2435	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	25.5	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGGTTGGTAGGGGCAAG	78179591	True	NA	NA	False	AATAAA	-15	NA	78187325	78195125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78187434_78190969_78191061_78194738
transcript_63444.known	chr17	+	550	3	FSM	ENSG00000183077.16	ENST00000586731.1	550	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	29.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGGTATTTTGTTA	78179666	True	NA	3	True	AATAAA	-17	NA	78187400	78197560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78197134
transcript_63445.known	chr17	+	582	3	FSM	ENSG00000183077.16	ENST00000591952.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	33	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGCAGTGGCGTGAT	78179627	True	NA	NA	False	NA	NA	NA	78187361	78207329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78187434_78190969_78191061_78206910
transcript_63448.known	chr17	+	2574	4	FSM	ENSG00000089685.15	ENST00000350051.8	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_3	185.581967514806	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTTTTTTCTTTTTCTTT	78200877	True	NA	11	True	AATAAA	-21	NA	78214252	78225635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78223464
transcript_63449.known	chr17	+	2711	5	FSM	ENSG00000089685.15	ENST00000301633.8	2711	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	730.601250683299	277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTTTCTTTTTCTTTT	NA	False	NA	12	True	AATAAA	-22	NA	78214185	78225636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78214428_78214679_78214790_78215965_78216035_78216663_78216782_78223464
transcript_63450.known	chr17	+	648	5	FSM	ENSG00000089685.15	ENST00000590925.6	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	842.78541159657	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTCTGGCCGGAGCTGCC	78200887	True	NA	NA	False	NA	NA	NA	78214262	78223554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78214428_78214679_78214790_78216663_78216782_78222827_78222993_78223464
transcript_63474.nnic	chr17	+	903	4	NNC	ENSG00000266970.2	novel	874	3	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	3.68178700572909	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359783	True	NA	-14	True	CATAAA	-7	NA	78360414	78364905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78360774_78361765_78361822_78362672_78362752_78364496
transcript_63479.nnic	chr17	+	1144	4	NNC	ENSG00000266970.2	novel	1119	3	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	16.1107279647928	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359829	True	NA	-14	True	CATAAA	-7	NA	78360460	78364905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78361061_78361765_78361822_78362672_78362752_78364496
transcript_63480.nnic	chr17	+	843	4	NNC	ENSG00000266970.2	novel	490	2	NA	NA	845	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	13.29995822884	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78361279	False	NA	-14	True	CATAAA	-7	NA	78361305	78364905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78361605_78361765_78361822_78362672_78362752_78364496
transcript_63485.nnic	chr17	+	663	4	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3270	702	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	3.09120616516523	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	78365909	False	NA	4	True	AATAAA	-17	NA	78365940	78374613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78368727_78368894_78374362
transcript_63488.nic	chr17	+	842	3	FSM	ENSG00000266970.2	ENST00000687996.1	874	3	3	29	0	0	multi-exon	FALSE	canonical	3	8	junction_1	12.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359788	True	NA	-14	True	CATAAA	-7	NA	78360419	78364905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78360774_78362672_78362752_78364496
transcript_63489.nnic	chr17	+	1047	3	FSM	ENSG00000266970.2	ENST00000689065.1	1047	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGAAGTACACAGTGGT	78359788	True	NA	6	True	AATAAA	-18	NA	78360419	78364925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78360774_78362672_78362937_78364496
transcript_63490.nnic	chr17	+	1118	3	FSM	ENSG00000266970.2	ENST00000691100.1	1119	3	-30	31	11	0	multi-exon	FALSE	canonical	1	1	junction_1	16	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78359799	True	NA	-14	True	CATAAA	-7	NA	78360430	78364905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78361061_78362672_78362752_78364496
transcript_63491.nnic	chr17	+	772	3	NIC	ENSG00000266970.2	novel	1119	3	NA	NA	521	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGGAAGTACACAGTGGT	78360955	True	NA	6	True	AATAAA	-18	NA	78360981	78364925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78361061_78362672_78362937_78364496
transcript_63492.nnic	chr17	+	862	3	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3314	4451	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGAGTGGTGGCATGTG	78365864	True	NA	NA	False	AAAAAG	-1	NA	78365984	78369387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78368727
transcript_63495.nnic	chr17	+	482	3	NNC	ENSG00000266970.2	novel	777	5	NA	NA	3285	702	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	0.5	55	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	78365924	False	NA	4	True	AATAAA	-17	NA	78365955	78374613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78366113_78367192_78367267_78374362
transcript_63496.nnic	chr17	+	821	2	Antisense	novelGene_ENSG00000243870.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	5	junction_1	0	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGGCTCTGCGTGAATC	78369283	False	NA	4	True	AATAAA	-17	NA	78369307	78374613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_78369878_78374362
transcript_63498.known	chr17	+	490	2	FSM	ENSG00000266970.2	ENST00000587575.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGATATTCATTCATGATG	78362567	False	NA	-14	True	CATAAA	-7	NA	78362670	78364905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78362752_78364496
transcript_635.known	SIRV7	-	889	6	FSM	SIRV7A	SIRV708	889	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1868.58798026745	1481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATCCTAAGAGATCGAC	NA	False	NA	NA	False	NA	NA	NA	147957	56037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_56098_70883_70988_78841_78909_78928_78964_114686_114961_147608
transcript_63500.known	chr17	+	2297	10	FSM	ENSG00000087157.19	ENST00000262764.11	2297	10	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_3	61.9039478985961	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78372180	True	NA	14	True	AATAAA	-18	NA	78378648	78424659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78378809_78392475_78392666_78396307_78396386_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_63511.nic	chr17	+	2125	9	NIC	ENSG00000087157.19	novel	2033	9	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	55.132652530057	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	78372169	True	NA	3	True	AATATA	-18	NA	78378637	78424554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_63512.nic	chr17	+	2230	9	NIC	ENSG00000087157.19	novel	2297	10	NA	NA	-11	0	combination_of_known_junctions	FALSE	canonical	3	156	junction_2	55.132652530057	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGTTGTGTGGGAAAT	78372169	True	NA	14	True	AATAAA	-18	NA	78378637	78424659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414878_78415028_78419545_78419676_78424060
transcript_63514.known	chr17	+	2033	9	FSM	ENSG00000087157.19	ENST00000589426.5	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_6	77.3618728767602	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATTGCCTTTAACCA	78372188	True	NA	3	True	AATATA	-18	NA	78378656	78424554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_78378809_78392475_78392666_78398251_78398352_78399347_78399538_78400676_78400856_78403567_78404090_78414951_78415028_78419545_78419676_78424060
transcript_63533.nnic	chr17	+	1249	4	NNC	ENSG00000267432.6	novel	2710	4	NA	NA	-44	10	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	4.49691252107735	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCAACAAGTTCGTTTT	78484567	True	NA	NA	False	AATGAA	-16	NA	78484837	78490635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78485163_78489374_78489575_78489712_78489803_78490001
transcript_63534.nic	chr17	+	1149	3	NIC	ENSG00000267432.6	novel	2710	4	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	4	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTCTGAAACAGGCCAACA	78484567	True	NA	NA	False	AATGAA	-6	NA	78484837	78490625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_78485163_78489374_78489575_78490001
transcript_63535.nnic	chr17	+	1026	3	NNC	ENSG00000267432.6	novel	1453	6	NA	NA	-44	10	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	5	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCAACAAGTTCGTTTT	78484567	True	NA	NA	False	AATGAA	-16	NA	78484837	78490635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78485163_78489374_78489575_78490134
transcript_63536.nnic	chr17	+	809	3	NNC	ENSG00000267432.6	novel	1453	6	NA	NA	-44	18	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTTCGTTTTTCCCTGCC	78484567	True	NA	NA	False	AATGAA	-24	NA	78484837	78490643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_78485163_78489374_78489575_78490359
transcript_63538.known	chr17	-	3286	13	FSM	ENSG00000108669.17	ENST00000591455.5	3286	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_12	11.2998893799895	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGTTGTTCGCGGTGTC	-78780735	True	NA	-1	True	AATAAA	-21	NA	78782272	78674047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78676170_78680189_78680345_78680970_78681043_78692416_78692494_78698268_78698381_78698819_78698969_78700330_78700444_78701670_78701752_78702121_78702241_78702537_78702605_78708196_78708262_78709649_78709733_78782201
transcript_6354.known	chr1	-	577	5	FSM	ENSG00000162604.12	ENST00000496465.1	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	125.97718047329	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAAGTTTCTCAATCTAGA	-61721205	True	NA	NA	False	NA	NA	NA	61725144	61694697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723773_61724901
transcript_63545.known	chr17	-	602	4	FSM	ENSG00000055483.20	ENST00000588130.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	75.5351279574977	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTGGGTGCTTCCTTGT	-78799705	True	NA	2	True	AATACA	-24	NA	78799722	78787380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78787659_78798399_78798552_78798907_78799024_78799666
transcript_63546.known	chr17	-	2479	3	ISM	ENSG00000055483.20	ENST00000592231.6	5895	21	41830	1	6	0	3prime_fragment	FALSE	canonical	3	53	junction_1	69.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTCTGTGTCTTTGTTGGT	-78798974	False	NA	-13	True	AATAAA	-17	NA	78798984	78795652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_78797903_78798399_78798552_78798907
transcript_63548.known	chr17	-	3652	5	FSM	ENSG00000035862.12	ENST00000262768.11	3652	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	10.0498756211209	90	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGGCTCTCTCCGTGTGG	-78923432	True	NA	-7	True	AATAAA	-19	NA	78925387	78852976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78855865_78857521_78857647_78870897_78871007_78873818_78873920_78924958
transcript_6355.known	chr1	-	1056	5	FSM	ENSG00000162604.12	ENST00000371178.5	1056	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	132.395949711462	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAGAAAAAAAAAAGGGC	-61721181	True	NA	NA	False	NA	NA	NA	61725120	61694153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61694771_61700933_61701026_61709328_61709438_61723712_61723787_61724956
transcript_63550.known	chr17	-	2202	6	FSM	ENSG00000108679.13	ENST00000262776.8	2202	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_2	23.6693895147298	151	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGTTTGTACAGAAAGT	-78976573	True	NA	-15	True	ATTAAA	-19	NA	78979923	78971254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78972705_78972969_78973223_78974687_78974820_78975964_78976157_78977139_78977215_78979823
transcript_63555.known	chr17	-	3287	5	FSM	ENSG00000171302.17	ENST00000392446.10	3287	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	31.1638813372147	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTCTGTCTCCCGGTCTG	-79007206	True	NA	-10	True	AATAAA	-18	NA	79009764	78991715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997645_78997839_78997964_79009663
transcript_63559.known	chr17	-	3534	4	FSM	ENSG00000171302.17	ENST00000302345.6	3534	4	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_3	3.29983164553722	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTCTGTCTCCCGGTCT	-79007259	True	NA	-11	True	AATAAA	-17	NA	79009817	78991716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_78993921_78995017_78995222_78996991_78997964_79009663
transcript_63560.known	chr17	+	2886	4	FSM	ENSG00000173918.15	ENST00000579760.6	2886	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.942809041582063	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCCTCGTCAGTTTGCT	79024158	False	NA	6	True	ATTAAA	-22	NA	79024168	79049788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79024495_79043954_79044124_79046554_79046695_79047537
transcript_63563.nic	chr17	-	534	5	ISM	ENSG00000167281.20	ENST00000581393.5	1201	6	950	-16	168	0	3prime_fragment	FALSE	canonical	3	85	junction_1	15.2212844398888	72	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	-79096940	True	NA	25	True	AAAACA	-41	NA	79097558	79090799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_63564.nic	chr17	-	700	5	ISM	ENSG00000167281.20	ENST00000648001.1	2461	11	17997	1433	143	0	3prime_fragment	FALSE	canonical	3	16	junction_4	42.9097890929331	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATGTTAAGATCCAAGCAAC	-79096965	True	NA	25	True	AAAACA	-41	NA	79097583	79090799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_79090886_79094450_79094530_79095512_79095575_79096652_79096834_79097291
transcript_63565.nic	chr17	-	1143	5	ISM	ENSG00000167281.20	ENST00000582894.5	611	6	168	-433	168	0	3prime_fragment	FALSE	canonical	3	16	junction_1	43.8919126947095	24	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCGACGTAGTCAC	-79096940	True	NA	-18	True	ATTAAA	-15	NA	79097558	79091946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_79092642_79094450_79094530_79095512_79095575_79096652_79096693_79097291
transcript_63566.nic	chr17	-	1309	5	NIC	ENSG00000167281.20	novel	877	4	NA	NA	143	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	52.4517635547176	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGCCGACGTAGTCAC	-79096965	True	NA	-18	True	ATTAAA	-15	NA	79097583	79091946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_79092642_79094450_79094530_79095512_79095575_79096652_79096834_79097291
transcript_63570.nnic	chr17	+	1263	3	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	7	junction_1	5.5	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183391	False	NA	9	True	AAAAAG	-3	NA	79183417	79186282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_79183693_79184346_79184578_79185525
transcript_63572.nnic	chr17	+	1184	3	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	7.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183389	True	NA	9	True	AAAAAG	-3	NA	79183423	79186282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_79183693_79184419_79184578_79185525
transcript_63574.nnic	chr17	+	1141	3	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	9	junction_1	4.5	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183153	True	NA	9	True	AAAAAG	-3	NA	79183501	79186282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_79183693_79184384_79184578_79185525
transcript_63578.nnic	chr17	+	1058	2	Antisense	novelGene_ENSG00000167281.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_1	0	102	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAACGTGTGTGTTTGGC	79183365	False	NA	9	True	AAAAAG	-3	NA	79183391	79186282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr17_+_79183693_79185525
transcript_63581.nnic	chr17	+	469	6	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	11	405	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_5	301.824717344355	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	79765196	True	NA	20	True	AATAAA	-16	NA	79778173	79788388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79787655_79787695_79788308
transcript_63583.nnic	chr17	+	430	5	NNC	ENSG00000173894.11	novel	4628	5	NA	NA	11	405	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_4	250.72145899384	150	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	79765196	True	NA	20	True	AATAAA	-16	NA	79778173	79788388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79788308
transcript_63586.nnic	chr17	+	324	4	NNC	ENSG00000173894.11	novel	1061	4	NA	NA	11	405	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_3	296.872961981309	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGCCTGATGTACATCAT	79765196	True	NA	20	True	AATAAA	-16	NA	79778173	79788388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_79778308_79778383_79778428_79779361_79779428_79788308
transcript_63588.known	chr17	+	567	3	FSM	ENSG00000173894.11	ENST00000571484.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	10.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCCTTTTCTGCTGAG	79765185	True	NA	3	True	GATAAA	-15	NA	79778162	79779739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79778308_79778383_79778428_79779361
transcript_63590.known	chr17	+	4628	5	FSM	ENSG00000173894.11	ENST00000310942.9	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	515	junction_4	50.719818611663	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTTTCAACTATGGCTGT	79765170	True	NA	25	True	ATTAAA	-31	NA	79778147	79787983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_79778308_79778383_79778428_79779361_79779428_79781695_79781802_79783731
transcript_63591.known	chr17	-	3752	5	FSM	ENSG00000141570.11	ENST00000269385.9	3752	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	2.1650635094611	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACATGTCTTGGTTTTATTC	-79796961	True	NA	NA	False	AATATA	-16	NA	79797077	79792131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_79795559_79796056_79796124_79796249_79796316_79796496_79796541_79796929
transcript_63593.known	chr17	-	6342	8	FSM	ENSG00000167291.16	ENST00000576768.5	6342	8	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_7	72.5964523786058	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATCTGTTCTTGGTATTT	-79950586	True	NA	-32	True	AATAGA	-20	NA	79950857	79935791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949824_79950410_79950579_79950755
transcript_63594.known	chr17	-	4244	8	FSM	ENSG00000167291.16	ENST00000340848.11	4244	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	61.2265781956743	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCTGCTAATGTCTGC	-79950565	True	NA	1	True	NA	NA	NA	79950836	79937907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_79941108_79942059_79942207_79944907_79945088_79947644_79947832_79948871_79949007_79949716_79949866_79950410_79950576_79950755
transcript_63595.nic	chr17	-	640	2	ISM	ENSG00000167291.16	ENST00000310924.7	10960	12	-4	80709	-4	-62481	5prime_fragment	FALSE	canonical	3	112	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTTGCTTTATTTAATTT	-80028962	True	NA	1	True	AATAAA	-17	NA	80035876	80013051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_80013610_80035794
transcript_63598.known	chr17	+	1970	11	FSM	ENSG00000141519.15	ENST00000269318.9	1970	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_10	7.15821206726931	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTTGAGTGAATATTTTA	80035634	True	NA	20	True	TATAAA	-15	NA	80036651	80067901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278_80047403_80048582_80048762_80049905_80049990_80050063_80050284_80058493_80058652_80058857_80058981_80065484_80065607_80067504
transcript_63603.known	chr17	+	714	4	FSM	ENSG00000141519.15	ENST00000576241.1	714	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	5.65685424949238	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCTTCTGTGCAAGGGAT	80035659	False	NA	NA	False	NA	NA	NA	80036676	80047454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036692_80038122_80038187_80039811_80040271_80047278
transcript_63605.known	chr17	+	816	3	FSM	ENSG00000141519.15	ENST00000572083.5	816	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCGTGGTGGCGCACGCCT	80035646	True	NA	NA	False	ACTAAA	-17	NA	80036663	80040535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036692_80038122_80038187_80039811
transcript_63607.known	chr17	+	537	3	FSM	ENSG00000141519.15	ENST00000574099.1	537	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCCCCAGAGCCATCCCAC	80035643	True	NA	NA	False	NA	NA	NA	80036660	80040187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80036758_80038122_80038187_80039811
transcript_63609.known	chr17	+	3549	21	FSM	ENSG00000171298.13	ENST00000390015.7	3549	21	0	0	0	0	multi-exon	FALSE	canonical	2	221	junction_1	42.2651156392598	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGCTTCTGCGGGTCTCTC	80095915	True	NA	14	True	AATAAA	-15	NA	80101593	80119877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80101626_80101810_80101891_80104554_80105133_80105748_80105895_80107556_80107723_80107799_80107897_80108289_80108410_80108488_80108608_80108696_80108829_80109944_80110056_80110726_80110841_80110940_80111026_80111982_80112101_80112577_80112712_80112875_80113028_80113217_80113367_80116967_80117110_80117599_80117750_80118192_80118358_80118652_80118806_80119271
transcript_63614.known	chr17	+	952	2	FSM	ENSG00000171298.13	ENST00000574376.1	952	2	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCACTTTCCTGAGTTCTGT	80095918	True	NA	NA	False	AATAAA	-18	NA	80101596	80102733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80101626_80101810
transcript_63617.known	chr17	-	2524	12	FSM	ENSG00000141543.12	ENST00000649764.2	2524	12	0	0	0	0	multi-exon	FALSE	canonical	3	1191	junction_7	98.1348372444349	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTAAAGTAATTACCTGT	-80132367	True	NA	NA	False	ATTAAA	-23	NA	80147128	80134368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792
transcript_63618.known	chr17	-	1579	13	FSM	ENSG00000141543.12	ENST00000647795.1	1579	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	398.745141036226	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTAAGTCTTTTTCATTA	-80132390	True	NA	40	True	AATACA	-3	NA	80147151	80135298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_80135507_80136003_80136132_80136227_80136336_80137385_80137502_80138141_80138281_80139020_80139163_80139669_80139751_80140007_80140141_80141318_80141382_80141781_80141849_80144171_80144245_80146792_80147023_80147060
transcript_63619.known	chr17	+	2888	18	FSM	ENSG00000181045.15	ENST00000361193.8	2888	18	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	15.4899230554246	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTTAATGTCTGCGTGG	80218746	True	NA	45	True	AATAAA	-17	NA	80220426	80253500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80220497_80220915_80221116_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_63622.known	chr17	+	1862	17	FSM	ENSG00000181045.15	ENST00000572725.5	1862	17	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	29.0452233594441	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGCCACCCGTGGGCATC	80218788	True	NA	NA	False	NA	NA	NA	80220468	80252716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80220497_80221547_80221795_80222654_80222848_80223251_80223338_80225836_80225917_80227817_80227961_80236927_80237104_80237521_80237595_80241770_80241822_80245195_80245257_80246153_80246210_80246508_80246650_80248129_80248258_80248574_80248675_80249153_80249288_80251328_80251402_80252624
transcript_63626.known	chr17	-	2705	8	FSM	ENSG00000181523.13	ENST00000326317.11	2705	8	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_1	10.6157372589482	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGATGATACCAACCTG	-80219452	True	NA	-12	True	AGTAAA	-29	NA	80220333	80209275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_80211012_80212070_80212275_80213803_80213886_80214171_80214329_80214614_80214766_80215032_80215139_80217031_80217193_80220225
transcript_63627.known	chr17	+	1519	2	FSM	ENSG00000181045.15	ENST00000572652.5	1519	2	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGAATG	80218757	True	NA	NA	False	NA	NA	NA	80220437	80222375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80220497_80220915
transcript_6363.known	chr1	-	427	1	FSM	ENSG00000271200.1	ENST00000605725.1	427	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGAGTCATTATTTTCT	-61742412	False	NA	0	True	AATAAA	-20	NA	61742424	61741997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_61742000_61742400
transcript_63632.nic	chr17	+	591	4	ISM	ENSG00000173821.20	ENST00000508628.6	17730	69	-38	116402	-24	-13097	5prime_fragment	FALSE	canonical	2	3	junction_3	8.83176086632785	481	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAGTCCGAGTCAATAGTTT	80254480	True	NA	NA	False	NA	NA	NA	80260827	80278910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80260903_80263573_80263779_80273240_80273405_80278763
transcript_63635.nic	chr17	+	444	3	ISM	ENSG00000173821.20	ENST00000319921.4	5316	17	-42	48059	-24	-18603	5prime_fragment	FALSE	canonical	3	18	junction_2	3	1178	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	80254480	True	NA	7	True	AAGAAA	-45	NA	80260827	80273404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80260903_80263573_80263779_80273240
transcript_63636.nnic	chr17	+	355	3	NNC	ENSG00000173821.20	novel	5316	17	NA	NA	-24	-18603	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	8	196	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGTGCACTGCCTCGGCT	80254480	True	NA	7	True	AAGAAA	-45	NA	80260827	80273404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_80260903_80263662_80263779_80273240
transcript_63645.nic	chr17	+	1195	10	NIC	ENSG00000173818.17	novel	2820	10	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	25.9234390341641	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	32	True	AATAGA	-22	NA	80415138	80430341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_63646.known	chr17	+	2820	10	FSM	ENSG00000173818.17	ENST00000518137.6	2820	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.0903233667185	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTTTTTTCTTCAG	80414434	True	NA	7	True	AATAAA	-22	NA	80415166	80438086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_63651.nic	chr17	+	1150	10	NIC	ENSG00000173818.17	novel	908	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	28.8319952590396	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	80415237	True	NA	32	True	AATAGA	-22	NA	80415451	80430341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_63654.nic	chr17	+	1406	9	ISM	ENSG00000173818.17	ENST00000518137.6	2820	10	-28	7743	-26	0	5prime_fragment	FALSE	canonical	0	0	junction_3	26.8700576850888	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	NA	False	NA	34	True	AATAGA	-24	NA	80415138	80430343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_80415251_80415649_80415822_80421827_80421963_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_63658.nic	chr17	+	1060	9	NIC	ENSG00000173818.17	novel	2680	9	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_8	15.169356446468	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	NA	False	NA	32	True	AATAGA	-22	NA	80415138	80430341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_63659.known	chr17	+	2680	9	FSM	ENSG00000173818.17	ENST00000520367.5	2680	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	22.0166840146285	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAGCTTGATTTTTTTTC	80414434	True	NA	2	True	AATAAA	-17	NA	80415166	80438081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80436132
transcript_63665.nic	chr17	+	1015	9	NIC	ENSG00000173818.17	novel	908	9	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	22.3201142470194	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCTCAGGATTCATT	80415237	True	NA	32	True	AATAGA	-22	NA	80415451	80430341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772_80429832_80430040
transcript_63671.known	chr17	+	1226	8	FSM	ENSG00000173818.17	ENST00000323854.9	1226	8	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	12.9599067771905	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCAGGATTCATTTT	80414451	True	NA	34	True	AATAGA	-24	NA	80415183	80430343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80422205_80422246_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_6368.nic	chr1	+	1802	11	ISM	ENSG00000132849.22	ENST00000646453.1	5234	18	-46	46555	-46	0	5prime_fragment	FALSE	canonical	3	4	junction_1	28.1120970402423	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTAGATTTTTCTCTC	61951943	True	NA	15	True	AATAAA	-27	NA	61952006	62117395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_61952412_61990167_61990365_62017855_62017948_62037976_62038050_62050965_62051059_62079449_62079568_62084514_62084649_62108436_62108521_62114052_62114247_62116531_62116680_62117131
transcript_63681.known	chr17	+	702	7	FSM	ENSG00000173818.17	ENST00000522577.5	702	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	28.9597421719646	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCCACAGGACCACAGCCC	80414434	True	NA	NA	False	NA	NA	NA	80415166	80429842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80423519_80423633_80425031_80425101_80425491_80425621_80428595_80428661_80429772
transcript_63695.nic	chr17	+	817	4	NIC	ENSG00000173818.17	novel	580	3	NA	NA	-26	2	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	26.6624996744283	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATGGTATGTTAATTGT	NA	False	NA	NA	False	TTTAAA	-9	NA	80415138	80418839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80417810_80417946_80418441
transcript_63697.known	chr17	+	864	4	FSM	ENSG00000173818.17	ENST00000523999.5	864	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	27.5801861245835	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTGTGTTTAATTATTG	80414445	True	NA	NA	False	AATACA	-16	NA	80415177	80420533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649_80415822_80419585_80419721_80420049
transcript_63703.nic	chr17	+	490	3	NIC	ENSG00000173818.17	novel	375	2	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	25	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	NA	False	NA	26	True	AATAAA	-37	NA	80415138	80417145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415251_80415649_80415822_80416939
transcript_63707.nnic	chr17	+	709	3	NNC	ENSG00000173818.17	novel	690	2	NA	NA	-26	22239	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	29.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAACAAACAAAAAAACACA	NA	False	NA	NA	False	AAAACA	-3	NA	80415138	80460325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_80415251_80415649_80416228_80460306
transcript_63708.nic	chr17	+	661	3	NIC	ENSG00000173818.17	novel	375	2	NA	NA	50	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	80414503	False	NA	26	True	AATAAA	-37	NA	80415235	80417145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_80415519_80415649_80415822_80416939
transcript_63711.known	chr17	+	690	2	FSM	ENSG00000173818.17	ENST00000520537.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGTCTGGGGAGTCT	80414432	True	NA	NA	False	NA	NA	NA	80415164	80416253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415251_80415649
transcript_63714.known	chr17	+	375	2	FSM	ENSG00000173818.17	ENST00000523165.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGTCCCCTGCGTAATT	80415438	False	NA	26	True	AATAAA	-37	NA	80415652	80417145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415822_80416939
transcript_63715.known	chr17	+	1847	2	FSM	ENSG00000173818.17	ENST00000521847.5	1847	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTATGGTATGTTAATT	80415254	True	NA	NA	False	TTTAAA	-7	NA	80415468	80418837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80415822_80417343
transcript_63718.known	chr17	+	611	8	FSM	ENSG00000176108.9	ENST00000572525.5	611	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	87.1088926784945	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCGTAACGTGGCCTCGTC	NA	False	NA	NA	False	NA	NA	NA	80991597	80999145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80991674_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_63721.known	chr17	+	1664	8	FSM	ENSG00000176108.9	ENST00000325167.9	1664	8	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_7	12.033965536373	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCGTGGACTTGGGCG	80988348	True	NA	26	True	ATTAAA	-19	NA	80991840	81000133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_80991982_80994580_80994691_80995018_80995107_80995671_80995759_80997006_80997073_80997260_80997342_80998365_80998421_80999097
transcript_63724.known	chr17	+	2229	16	FSM	ENSG00000175866.16	ENST00000575245.5	2229	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.39049559027	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTGTGATCTGTCCGCC	81032594	False	NA	16	True	AATAAA	-16	NA	81035157	81116225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110956_81115769
transcript_63725.known	chr17	+	2133	15	FSM	ENSG00000175866.16	ENST00000572329.5	2133	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	30.1009356421127	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	81032587	True	NA	NA	False	AAAAAG	-10	NA	81035150	81109372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81036862_81036962_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085716_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_63727.known	chr17	+	2129	15	FSM	ENSG00000175866.16	ENST00000435091.7	2129	15	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_13	21.0776020012346	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCAGGTGTGATCTGTCCGC	81032598	False	NA	15	True	AATAAA	-15	NA	81035161	81116224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81110913_81110960_81115769
transcript_63730.known	chr17	+	1939	14	FSM	ENSG00000175866.16	ENST00000321280.11	1939	14	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_13	17.8049923189899	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAAACTGCCAGGCAGGAC	NA	False	NA	NA	False	NA	NA	NA	81035121	81109238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81108967
transcript_63731.known	chr17	+	3304	14	FSM	ENSG00000175866.16	ENST00000428708.7	3304	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_13	18.0111733894243	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAAATCACCCAACTTCC	81032587	True	NA	NA	False	AATAAA	-26	NA	81035150	81117434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474_81108510_81115769
transcript_63734.known	chr17	+	2512	13	FSM	ENSG00000175866.16	ENST00000575712.5	2512	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_9	11.8074835027057	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAGAAAAAAAGAAA	81032592	False	NA	NA	False	AAAAAG	-25	NA	81035155	81109387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81035309_81053667_81053744_81057880_81057968_81084831_81084894_81085653_81085726_81086442_81086581_81099927_81100081_81103501_81103724_81103906_81104109_81104513_81104716_81106077_81106147_81106744_81106908_81108474
transcript_63737.known	chr17	-	1747	13	FSM	ENSG00000141577.14	ENST00000573053.5	1747	13	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_5	36.7260882147222	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTTGAGTGACTGCCTT	-81197002	False	NA	-15	True	AGTAAA	-18	NA	81197019	81189596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81189844_81189914_81189976_81190638_81190803_81190906_81191085_81191192_81191351_81192317_81192393_81192475_81192594_81192735_81192844_81193925_81194128_81194869_81194973_81195834_81195952_81196700_81196827_81196929
transcript_63738.known	chr17	-	2455	13	FSM	ENSG00000167302.11	ENST00000637944.2	2455	13	0	0	0	0	multi-exon	TRUE	canonical	3	48	junction_12	16.454271650716	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237154	True	NA	-5	True	AATAAA	-19	NA	81239055	81228276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81232314_81232519_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_63739.known	chr17	-	2287	12	FSM	ENSG00000167302.11	ENST00000300714.7	2287	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	23.61187542651	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGCCGCTTATTTTTCT	-81237190	True	NA	-5	True	AATAAA	-19	NA	81239091	81228276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81229477_81230543_81230679_81231397_81231477_81231577_81231692_81231846_81232022_81233431_81233504_81233637_81233717_81233980_81234049_81236707_81236802_81236979_81237072_81237386_81237460_81238985
transcript_63743.known	chr17	+	278	3	FSM	ENSG00000224877.4	ENST00000577158.2	278	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	521.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGCACATATCGAATGCC	81223501	True	NA	NA	False	NA	NA	NA	81239304	81241081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81239404_81239594_81239679_81240986
transcript_63745.known	chr17	+	565	3	FSM	ENSG00000224877.4	ENST00000431388.3	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	921	junction_1	61	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGGTCTTGGCCTCTC	81223514	True	NA	62	True	GGGGCT	-20	NA	81239317	81241310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81239448_81239567_81239679_81240986
transcript_63747.known	chr17	+	709	2	FSM	ENSG00000224877.4	ENST00000573173.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGAGGCGTGGGTAG	81239902	False	NA	-79	True	NA	NA	NA	81239913	81241169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81240440_81240986
transcript_63748.nic	chr17	+	558	2	ISM	ENSG00000224877.4	ENST00000573090.1	741	3	370	-67	52	2	3prime_fragment	FALSE	canonical	3	8	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGGGCTTACTGTGTGC	81239669	False	NA	33	True	GATAAA	-20	NA	81239680	81241281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_81239944_81240986
transcript_63749.known	chr17	+	365	2	FSM	ENSG00000224877.4	ENST00000576002.1	365	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCCTGGGGCTTACTGTGT	81239580	False	NA	31	True	GATAAA	-18	NA	81239610	81241279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81239683_81240986
transcript_63751.known	chr17	-	414	2	FSM	ENSG00000262877.5	ENST00000608155.1	414	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATTCATTTTTTTTTTC	-81390114	False	NA	NA	False	ATTAAA	-15	NA	81390124	81388130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81388310_81389889
transcript_63752.known	chr17	-	1860	7	FSM	ENSG00000184009.13	ENST00000680227.1	1860	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6684.80634640143	2992	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81262476	True	NA	26	True	AATAAA	-12	NA	81512776	81509976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
transcript_63754.known	chr17	-	1449	6	FSM	ENSG00000184009.13	ENST00000571721.6	1449	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_5	5682.32132143194	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGGACTCAGCAGATGCGTA	-81262478	True	NA	NA	False	NA	NA	NA	81512778	81510689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512463
transcript_63755.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000679480.1	1919	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	5697.07372604568	4083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGAATGGCTCCTGTT	-81512658	False	NA	27	True	AATAAA	-13	NA	81512671	81509975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512600
transcript_63756.known	chr17	-	2052	6	FSM	ENSG00000184009.13	ENST00000570382.2	2052	6	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	5661.98733308368	4082	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAATGAATGGCTCCTGTT	-81262518	True	NA	27	True	AATAAA	-13	NA	81512818	81509975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512614
transcript_63758.known	chr17	-	1919	6	FSM	ENSG00000184009.13	ENST00000573283.7	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_5	1010.68471839639	16826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATGGCTCCTGTTTGGGG	-81262499	True	NA	32	True	AATAAA	-18	NA	81512799	81509970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512231_81512361_81512733
transcript_63759.known	chr17	-	1749	7	FSM	ENSG00000184009.13	ENST00000681092.1	1749	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6587.02154281854	4281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81262500	True	NA	26	True	AATAAA	-12	NA	81512800	81509976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510330_81510478_81510834_81510926_81511109_81511187_81511627_81511902_81512143_81512247_81512361_81512733
transcript_6376.known	chr1	+	569	3	FSM	ENSG00000132849.22	ENST00000465798.2	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	4	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCCCTAGATTTTTCTCTC	NA	False	NA	15	True	AATAAA	-27	NA	62114089	62117395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62114247_62116531_62116680_62117131
transcript_63760.known	chr17	-	2241	5	FSM	ENSG00000184009.13	ENST00000574671.6	2241	5	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_4	1082.29694977857	3766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACCAATGAATGGCTCCTGT	-81512838	False	NA	26	True	AATAAA	-12	NA	81512851	81509976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81512143_81512231_81512361_81512733
transcript_63761.known	chr17	-	2141	6	FSM	ENSG00000184009.13	ENST00000679535.1	2141	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	5511.97106668749	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511804_81511902_81512143_81512231_81512361_81512733
transcript_63762.known	chr17	-	1958	5	FSM	ENSG00000184009.13	ENST00000576917.5	1958	5	0	0	0	0	multi-exon	FALSE	canonical	3	11942	junction_4	1081.79226286751	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGTGCTGCCGTAACCA	-81262480	True	NA	11	True	NA	NA	NA	81512780	81509991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511627_81511902_81512143_81512231_81512361_81512733
transcript_63763.known	chr17	-	2005	7	FSM	ENSG00000184009.13	ENST00000572105.7	2005	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	6189.05972933961	3736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCAATGAATGGCTCCTG	-81512838	False	NA	25	True	AATAAA	-11	NA	81512851	81509977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81510834_81510926_81511109_81511187_81511627_81511762_81511804_81511902_81512143_81512231_81512361_81512733
transcript_63764.known	chr17	+	1896	2	FSM	ENSG00000182612.10	ENST00000571914.1	1896	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGGTGGTGGTTTGGAAT	NA	False	NA	NA	False	AATATA	-22	NA	81637170	81639177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81637407_81637517
transcript_63766.known	chr17	-	458	4	FSM	ENSG00000185527.12	ENST00000571004.1	458	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1.24721912892465	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGATGGGACTGCAACCT	-81653306	True	NA	NA	False	NA	NA	NA	81653694	81650962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81653670
transcript_63767.known	chr17	-	988	4	FSM	ENSG00000185527.12	ENST00000331056.10	988	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.9700509722291	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGGCATATTTGTGC	-81652469	False	NA	-2	True	AATAAA	-18	NA	81656542	81650458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81651151_81651644_81651686_81653159_81653365_81656492
transcript_63768.known	chr17	-	923	2	FSM	ENSG00000204237.5	ENST00000571757.1	923	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCACACCCCCTCACAGA	-81662560	True	NA	-106	True	NA	NA	NA	81666633	81665140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666154
transcript_63769.known	chr17	-	803	2	FSM	ENSG00000204237.5	ENST00000571503.1	803	2	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGGAAGAATTAGTTACTGA	-81662522	True	NA	-66	True	NA	NA	NA	81666595	81665100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666276
transcript_63770.known	chr17	-	637	2	FSM	ENSG00000204237.5	ENST00000374741.4	637	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-81662532	True	NA	-1	True	AATAAA	-24	NA	81666605	81665035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666517
transcript_63771.known	chr17	-	553	2	FSM	ENSG00000204237.5	ENST00000571092.1	553	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGGTGGGCTCCCAAGCA	-81662505	True	NA	NA	False	NA	NA	NA	81666578	81665460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81666149
transcript_63772.known	chr17	-	678	2	FSM	ENSG00000204237.5	ENST00000573786.1	678	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGTGGTTTCACAGGA	-81662073	False	NA	-21	True	AATAAA	-4	NA	81666146	81665055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665585_81665997
transcript_63773.known	chr17	-	1600	1	FSM	ENSG00000204237.5	ENST00000575963.1	1600	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTTTTGTTTTGGGGGTGG	-81662562	True	NA	-1	True	AATAAA	-24	NA	81666635	81665035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81665000_81666600
transcript_63775.known	chr17	+	2095	6	FSM	ENSG00000185298.13	ENST00000329214.13	2095	6	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	16.4438438328756	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTTAAATTGGAGAATATA	81661436	True	NA	17	True	ATTAAA	-20	NA	81666736	81673899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81666901_81667728_81667863_81670224_81670454_81671743_81671827_81672075_81672156_81672494
transcript_63777.nic	chr17	+	572	3	ISM	ENSG00000185298.13	ENST00000329214.13	2095	6	-45	3446	-45	162	5prime_fragment	FALSE	canonical	3	326	junction_1	19.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAGGCGGGAGGGG	81666671	False	NA	NA	False	AAAAAG	-11	NA	81666691	81670453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_+_81666901_81667728_81667863_81670224
transcript_63780.known	chr17	+	2893	22	FSM	ENSG00000185359.14	ENST00000329138.9	2893	22	0	0	0	0	multi-exon	FALSE	canonical	2	425	junction_17	78.996455042597	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCGTTTTTTCTTTAATT	81674290	True	NA	17	True	AATAAA	-18	NA	81684010	81702121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_63781.known	chr17	+	2895	22	FSM	ENSG00000185359.14	ENST00000677243.1	2895	22	0	0	0	0	multi-exon	TRUE	canonical	2	87	junction_21	151.429664566285	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATTTCAGAAAGCATCAG	81683945	False	NA	1	True	AATAAA	-2	NA	81683962	81702105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688703_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701537
transcript_63782.known	chr17	+	2830	22	FSM	ENSG00000185359.14	ENST00000677225.1	2830	22	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	162.481158858887	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCATCAGCGTTTTTTCTT	81674300	True	NA	12	True	AATAAA	-13	NA	81684020	81702116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81684104_81685604_81685690_81686311_81686388_81687002_81687096_81688751_81688828_81690181_81690235_81690673_81690743_81691446_81691572_81693502_81693582_81693653_81693753_81693869_81693966_81694814_81694854_81694923_81695068_81695163_81695224_81695785_81696000_81696356_81696530_81696606_81696748_81696823_81696999_81700466_81700601_81700694_81700815_81701044_81701132_81701507
transcript_63796.known	chr17	-	763	5	FSM	ENSG00000214087.9	ENST00000573715.2	763	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	222.258155080978	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTAACCCTACATGATGG	-81674426	True	NA	NA	False	NA	NA	NA	81683668	81681607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81682490_81682676_81683012_81683127_81683592
transcript_63799.known	chr17	-	694	4	FSM	ENSG00000214087.9	ENST00000576135.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	225.161176839071	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGGCTCACACCTGTAAT	-81674426	True	NA	NA	False	AAAAAG	-20	NA	81683668	81681491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683592
transcript_63803.known	chr17	-	869	3	FSM	ENSG00000214087.9	ENST00000573392.5	869	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	262.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTGTCCCCA	-81674424	True	NA	-59	True	AATAAA	-1	NA	81683666	81681200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81683592
transcript_63806.known	chr17	-	1977	1	FSM	ENSG00000262049.1	ENST00000575312.1	1977	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	75	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGGATGCGCGTATCTG	-81702862	True	NA	NA	False	AGTAAA	-23	NA	81703300	81701323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81701300_81703300
transcript_63807.known	chr17	-	1087	5	FSM	ENSG00000214087.9	ENST00000622299.5	1087	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.941379338799	3054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674555	True	NA	-45	True	AATAAA	-15	NA	81683797	81681186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682150_81683012_81683127_81683535_81683595_81683692
transcript_63808.known	chr17	-	1856	4	FSM	ENSG00000214087.9	ENST00000570910.1	1856	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	235.740441069316	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TTAAAAAATATAAGAAATAA	-81674496	True	NA	-80	True	NA	NA	NA	81683738	81681221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81683127_81683535_81683595_81683692
transcript_63809.known	chr17	-	2343	3	FSM	ENSG00000214087.9	ENST00000577142.1	2343	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	264.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCAGACTGGATGAGCAG	-81674539	True	NA	-45	True	AATAAA	-15	NA	81683781	81681186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81683595_81683692
transcript_63810.known	chr17	-	1526	5	FSM	ENSG00000214087.9	ENST00000571082.5	1526	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	242.759654802852	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAATATAAGAAATAAAA	-81674501	True	NA	-78	True	NA	NA	NA	81683743	81681219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81681880_81682033_81682676_81683012_81683127_81683535_81683595_81683692
transcript_63811.known	chr17	+	262	3	FSM	ENSG00000185359.14	ENST00000677209.1	262	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	399.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGAGACGGGGGCATG	81674290	True	NA	NA	False	NA	NA	NA	81684010	81687095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81684104_81686311_81686388_81687002
transcript_63812.known	chr17	+	1942	11	FSM	ENSG00000183048.12	ENST00000350690.10	1942	11	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_7	11.0435501538228	199	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTGTTCCTGCCTGCGCT	81709991	True	NA	16	True	AATAAA	-16	NA	81712283	81721012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81712520_81714952_81715073_81715477_81715593_81715692_81715742_81716008_81716051_81716811_81716856_81717001_81717073_81717398_81717492_81717783_81717862_81719830_81719888_81719975
transcript_63816.known	chr17	+	1009	5	FSM	ENSG00000262814.8	ENST00000333676.8	1009	5	0	0	0	0	multi-exon	FALSE	canonical	3	1205	junction_1	33.5596483890997	5854	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGGAGTGCCGTGCTC	81680667	True	NA	31	True	AATACA	-13	NA	81703366	81707517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81703576_81704243_81704431_81704632_81704717_81706905_81707041_81707123
transcript_63818.known	chr17	-	1038	7	FSM	ENSG00000225663.8	ENST00000572645.5	1038	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	423.572504615994	400	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81823970	True	NA	-12	True	AATAAA	-16	NA	81833268	81822416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_63820.known	chr17	-	618	6	FSM	ENSG00000225663.8	ENST00000575061.2	618	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	461.085415080547	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGGCGTGACTGACGGCTG	-81823958	True	NA	NA	False	NA	NA	NA	81833256	81823125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81826379_81826516_81833237
transcript_63827.known	chr17	-	1282	5	FSM	ENSG00000225663.8	ENST00000455127.7	1282	5	0	0	0	0	multi-exon	FALSE	canonical	3	623	junction_4	141.046756432043	1027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCGGGCAGGGCTGGAA	-81823993	True	NA	44	True	NA	NA	NA	81833291	81822360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_63828.known	chr17	-	925	6	FSM	ENSG00000225663.8	ENST00000538396.5	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	445	junction_1	210.814041278089	1762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTGGCCTCTTGGTGGTCTG	-81823993	True	NA	-12	True	AATAAA	-16	NA	81833291	81822416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81822908_81823208_81823312_81823411_81823514_81824286_81824406_81824498_81824555_81833237
transcript_63829.known	chr17	-	1123	4	FSM	ENSG00000225663.8	ENST00000573478.5	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	372.786206230268	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCGGCACTGGGCGTGGCCT	-81824004	True	NA	-24	True	AATAAA	-4	NA	81833302	81822428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81823312_81824286_81824406_81824498_81824555_81833237
transcript_63830.known	chr17	-	2253	11	FSM	ENSG00000185624.16	ENST00000570907.6	2253	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	709.850582869381	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGCTGCCAGCCCTGGGGC	-81827732	True	NA	NA	False	NA	NA	NA	81860515	81843430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845459_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_63831.known	chr17	-	2377	11	FSM	ENSG00000185624.16	ENST00000680914.1	2377	11	0	0	0	0	multi-exon	FALSE	canonical	1	51	junction_6	697.501541216935	857	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81827752	True	NA	-9	True	AATAAA	-13	NA	81860535	81843165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847013_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_63833.known	chr17	-	2469	11	FSM	ENSG00000185624.16	ENST00000681031.1	2469	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	710.675235251658	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTGAACACATTGGCCAAA	-81827830	True	NA	-45	True	NA	NA	NA	81860613	81843201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860336
transcript_63834.known	chr17	-	1989	10	FSM	ENSG00000185624.16	ENST00000680732.1	1989	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_8	728.556275735499	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGATCATGGCTCTTGCAT	-81827786	True	NA	NA	False	NA	NA	NA	81860569	81843513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81859180_81859388_81860326
transcript_63835.known	chr17	-	2609	10	FSM	ENSG00000185624.16	ENST00000681566.1	2609	10	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_5	720.066166369881	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACCACCTGTCCTTGCCTC	-81827803	True	NA	-12	True	AATAAA	-10	NA	81860586	81843168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845992_81846428_81846630_81846946_81847069_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_63836.known	chr17	-	2280	10	FSM	ENSG00000185624.16	ENST00000679439.1	2280	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	734.763017140918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACATTGGCCAAATAAAGTT	-81827711	True	NA	-38	True	NA	NA	NA	81860494	81843194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860326
transcript_63837.known	chr17	-	2157	9	FSM	ENSG00000185624.16	ENST00000415593.6	2157	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	774.300722829961	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTACCACCTGTCCTT	-81827750	True	NA	-17	True	AATAAA	-5	NA	81860533	81843173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81859178_81859388_81860326
transcript_63840.known	chr17	-	2386	11	FSM	ENSG00000185624.16	ENST00000680400.1	2386	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	709.790926963708	883	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTGTCCTTGCCTCGGG	-81860846	False	NA	-9	True	AATAAA	-13	NA	81860856	81843165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81844093_81845143_81845231_81845560_81845743_81845870_81845992_81846428_81846630_81846946_81847073_81847242_81847348_81855141_81855280_81855452_81855587_81859180_81859388_81860698
transcript_63843.nnic	chr17	+	475	3	Intergenic	novelGene_20	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGAAATGTACTGTGT	81860535	True	NA	NA	False	ATTAAA	-17	NA	81861090	81865081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr17_+_81861140_81863162_81863247_81864739
transcript_63850.known	chr17	+	325	1	FSM	ENSG00000278876.1	ENST00000623802.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGAGAGTTTCTGTTTGT	81862222	False	NA	NA	False	NA	NA	NA	81862777	81863102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81862800_81863100
transcript_63852.known	chr17	-	886	7	FSM	ENSG00000141522.12	ENST00000584461.5	886	7	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	309.399103999277	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACACGTGGGGTGTGCTGCTG	-81852246	True	NA	NA	False	NA	NA	NA	81871329	81868259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81868585_81868988_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_63853.nnic	chr17	-	1838	7	NNC	ENSG00000141522.12	novel	815	7	NA	NA	-40	0	intron_retention	FALSE	non_canonical	0	0	junction_1	368.017209742515	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	NA	False	NA	-18	True	AATAAA	-14	NA	81871418	81867720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_81868976_81869055_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_63854.known	chr17	-	1568	6	FSM	ENSG00000141522.12	ENST00000400721.8	1568	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	376.888630765111	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGCCTTCCCTGACCCAGC	-81852293	True	NA	NA	False	NA	NA	NA	81871376	81867896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81868944_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_63855.known	chr17	-	1837	6	FSM	ENSG00000141522.12	ENST00000269321.12	1837	6	0	0	0	0	multi-exon	FALSE	canonical	3	847	junction_5	78.8938527389809	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGGTGTCTGCTGCTT	-81852254	True	NA	-18	True	AATAAA	-14	NA	81871337	81867720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740_81869958_81871297
transcript_63860.known	chr17	-	1201	5	FSM	ENSG00000141522.12	ENST00000580685.5	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	932	junction_3	56.3443652905949	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGTGGAGTGTACCGTGG	-81850923	False	NA	NA	False	NA	NA	NA	81870006	81868365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81869076_81869172_81869237_81869329_81869407_81869541_81869626_81869740
transcript_63861.known	chr17	-	5089	13	FSM	ENSG00000185813.11	ENST00000538936.7	5089	13	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_7	18.5037533730022	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGAGTCCTGTCTCTCTA	-81907493	True	NA	1	True	AATAAA	-21	NA	81911399	81900957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81908875_81909038_81909513_81909603_81911266
transcript_63863.known	chr17	-	1006	12	FSM	ENSG00000185813.11	ENST00000576343.5	1006	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	85.952802732201	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCTGGAGGCTGCCAGG	-81907512	True	NA	NA	False	NA	NA	NA	81911418	81904897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81904945_81905065_81905155_81905381_81905448_81905669_81905736_81906099_81906178_81906463_81906547_81906759_81906899_81907553_81907599_81907772_81907858_81908567_81908635_81909513_81909603_81911266
transcript_63868.known	chr17	-	1097	6	FSM	ENSG00000183684.8	ENST00000505490.3	1097	6	0	0	0	0	multi-exon	FALSE	canonical	3	1522	junction_5	135.99411751984	5446	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTTTGATTCGTCCCACTG	-81856197	True	NA	-5	True	AATAAA	-25	NA	81891586	81887834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81888146_81888240_81888419_81888519_81888584_81889181_81889330_81890688_81890821_81891322
transcript_63875.known	chr17	+	672	5	FSM	ENSG00000141552.18	ENST00000577747.5	672	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1769.53897597651	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871641	True	NA	30	True	ATTAAA	-14	NA	81891759	81900254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891830_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_63876.known	chr17	+	599	5	FSM	ENSG00000141552.18	ENST00000578550.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	1764.60151309014	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTGGAAACAAGGGCTGGA	81871631	True	NA	-65	True	NA	NA	NA	81891749	81900159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81893103_81893188_81893551_81893615_81894466_81894587_81899919
transcript_63882.known	chr17	+	578	4	FSM	ENSG00000141552.18	ENST00000572639.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	1730.40515486981	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	NA	False	NA	31	True	ATTAAA	-15	NA	81891646	81900255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891706_81893551_81893615_81894466_81894587_81899919
transcript_63896.known	chr17	+	722	4	FSM	ENSG00000141552.18	ENST00000574924.6	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	873	junction_1	1375.02218163926	7796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871613	True	NA	28	True	AATAAA	-21	NA	81891731	81900356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891834_81893551_81893615_81894466_81894587_81899919
transcript_63901.known	chr17	+	881	4	FSM	ENSG00000141552.18	ENST00000357385.7	881	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	111.03452916398	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871620	True	NA	30	True	ATTAAA	-14	NA	81891738	81900254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891864_81894466_81894587_81899241_81899543_81899919
transcript_63911.known	chr17	+	687	4	FSM	ENSG00000141552.18	ENST00000392376.7	687	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	1688.07312901097	1055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871819	False	NA	30	True	ATTAAA	-14	NA	81891937	81900254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81892107_81893551_81893615_81894466_81894587_81899919
transcript_63920.known	chr17	+	668	3	FSM	ENSG00000141552.18	ENST00000571024.6	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	866	junction_1	1685	8469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871604	True	NA	28	True	AATAAA	-21	NA	81891722	81900356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891834_81894466_81894587_81899919
transcript_63921.known	chr17	+	603	3	FSM	ENSG00000141552.18	ENST00000577425.5	603	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	280.5	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGAGGCCTCTGGGTGC	81871604	True	NA	29	True	ATTAAA	-13	NA	81891722	81900253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891834_81894466_81894625_81899919
transcript_63922.known	chr17	+	575	3	FSM	ENSG00000141552.18	ENST00000579978.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	1780	5800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGAGGCCTCTGGGTG	81871601	True	NA	28	True	ATTAAA	-12	NA	81891719	81900252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81894466_81894587_81899919
transcript_63924.known	chr17	+	563	3	FSM	ENSG00000141552.18	ENST00000579133.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_2	185.5	315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871653	True	NA	30	True	ATTAAA	-14	NA	81891771	81900254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81894466_81894625_81899919
transcript_63927.known	chr17	+	686	3	FSM	ENSG00000141552.18	ENST00000572851.6	686	3	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	1988	2994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCTCGTCAAACCCTGAGT	81871616	True	NA	28	True	AATAAA	-21	NA	81891734	81900356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891864_81894466_81894587_81899919
transcript_63932.known	chr17	+	499	3	FSM	ENSG00000141552.18	ENST00000583839.1	499	3	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	2080	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81891776	False	NA	30	True	ATTAAA	-14	NA	81892062	81900254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81892107_81894466_81894587_81899919
transcript_63935.known	chr17	+	636	4	FSM	ENSG00000141552.18	ENST00000571874.6	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	1593.39769744475	2829	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGAGGCCTCTGGGTGCC	81871627	True	NA	30	True	ATTAAA	-14	NA	81891745	81900254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891864_81893551_81893615_81894466_81894587_81899919
transcript_63936.known	chr17	+	638	4	FSM	ENSG00000141552.18	ENST00000344877.10	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	788	junction_1	1408.73875821207	9174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGAGGCCTCTGGGTGCCT	81871604	True	NA	31	True	ATTAAA	-15	NA	81891722	81900255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81891842_81893551_81893615_81894466_81894587_81899919
transcript_63937.known	chr17	-	1725	10	FSM	ENSG00000187531.14	ENST00000328666.11	1725	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	35.0966918352397	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCGGTGTCCCCGAGTGGT	-81918159	False	2286	-1	True	ATTAAA	-16	NA	81918176	81911938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81912615_81913773_81913881_81914086_81914168_81914293_81914531_81914603_81914703_81915439_81915513_81915610_81915682_81917614_81917720_81917829_81917968_81918038
transcript_63938.known	chr17	+	1895	2	FSM	ENSG00000265688.2	ENST00000582106.1	1895	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCACTCCAAACCGCTTCAT	81927587	True	NA	5	True	NA	NA	NA	81927828	81930753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81928446_81929475
transcript_63954.known	chr17	-	1346	8	FSM	ENSG00000183010.17	ENST00000402252.6	1346	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_7	528.060177461251	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGGGTCTTCACCCACTCC	-81925317	True	NA	NA	False	NA	NA	NA	81937239	81932934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937179
transcript_63955.nnic	chr17	-	1872	8	NNC	ENSG00000183010.17	novel	1346	8	NA	NA	13	0	intron_retention	FALSE	canonical	3	182	junction_7	474.596498864766	1204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925361	True	NA	-19	True	ATTAAA	-18	NA	81937283	81932390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_63956.known	chr17	-	1904	8	FSM	ENSG00000183010.17	ENST00000619204.4	1904	8	0	0	0	0	multi-exon	FALSE	canonical	3	556	junction_7	351.510501483329	1441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_63962.nnic	chr17	-	1715	7	NNC	ENSG00000183010.17	novel	1740	7	NA	NA	13	0	intron_retention	FALSE	canonical	3	182	junction_6	638.425776596013	664	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925361	True	NA	-12	True	ATTAAA	-25	NA	81937283	81932383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937241
transcript_63963.known	chr17	-	1740	7	FSM	ENSG00000183010.17	ENST00000629768.2	1740	7	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	557.088388159565	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_63968.known	chr17	-	1811	7	FSM	ENSG00000183010.17	ENST00000403172.8	1811	7	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	606.730765844474	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925406	True	NA	-12	True	ATTAAA	-25	NA	81937328	81932383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934925_81935148_81935336_81935517_81936122_81936194_81936747_81936862_81937261
transcript_63982.known	chr17	-	2269	7	FSM	ENSG00000183010.17	ENST00000329875.13	2269	7	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_1	149.68234884433	1404	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAAGTCTACAGATTCA	-81925378	True	NA	-19	True	ATTAAA	-18	NA	81937300	81932390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_63983.known	chr17	-	1890	8	FSM	ENSG00000183010.17	ENST00000337943.9	1890	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	524.684356036453	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCTACAGATTCAAATGTTA	-81925335	True	NA	-12	True	ATTAAA	-25	NA	81937257	81932383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81932964_81933306_81933377_81934325_81934490_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_63984.known	chr17	-	1144	6	FSM	ENSG00000183010.17	ENST00000577756.5	1144	6	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	528.125742603028	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTCCTACTCCAGTATCAG	-81924947	False	NA	NA	False	NA	NA	NA	81936869	81932920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_81933377_81934652_81934746_81934925_81935148_81935336_81935517_81936122_81936194_81936747
transcript_63992.known	chr17	+	1764	16	FSM	ENSG00000169696.16	ENST00000306739.9	1764	16	0	0	0	0	multi-exon	TRUE	canonical	3	347	junction_7	46.4727399187476	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974773	True	NA	11	True	AATAAA	-19	NA	81977628	82017406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_63997.nnic	chr17	+	1755	16	NNC	ENSG00000169696.16	novel	5503	9	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	111.888515943326	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81975012	False	NA	11	True	AATAAA	-19	NA	81977867	82017406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_81977979_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81995991_81996066_81996419_81996847_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_64.known	ERCC-00134	+	257	1	FSM	ERCC-00134A	DQ516739	257	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	AATAGA	-40	NA	0	257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00134_+_0_300
transcript_64020.nic	chr17	+	1205	13	NIC	ENSG00000169696.16	novel	1764	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_4	117.221626512441	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTTCCTGTCATGCTTCC	81974773	True	NA	11	True	AATAAA	-19	NA	81977628	82017406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_82009036_82009192_82009485_82009568_82010801_82010869_82011542_82011606_82012230_82012284_82016475_82016528_82016799_82016870_82016940_82017114_82017308
transcript_64036.known	chr17	+	564	6	FSM	ENSG00000169696.16	ENST00000579684.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	179.202008917311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGGTGTTTTGATCATTTT	81974849	False	NA	2	True	AATAAA	-12	NA	81977704	81995147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820_81994879_81994957
transcript_64039.known	chr17	+	720	5	FSM	ENSG00000169696.16	ENST00000581647.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	45.1137451338281	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTTTTGATCATTTTCAA	81974775	True	NA	5	True	AATAAA	-15	NA	81977630	81995150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_81977749_81979183_81979240_81983553_81983669_81985506_81985608_81994820
transcript_64043.known	chr17	+	2698	17	FSM	ENSG00000169683.8	ENST00000306688.8	2698	17	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	13.8099545165797	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTCTGGCCCCGCCTCTCC	82022099	True	NA	17	True	AATACA	-22	NA	82023304	82031151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82023864_82024277_82024340_82024692_82024764_82024999_82025179_82025378_82025508_82026898_82027012_82027385_82027445_82027673_82027752_82028010_82028147_82028233_82028312_82028396_82028509_82028612_82028684_82029092_82029186_82029542_82029636_82030064_82030239_82030318_82030467_82030608
transcript_64053.known	chr17	-	894	5	FSM	ENSG00000169689.15	ENST00000583767.1	894	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	707.023470261066	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCAGCTGGCAGCGCTGC	-82000794	True	NA	NA	False	NA	NA	NA	82022852	82018865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022638
transcript_64056.known	chr17	-	882	5	FSM	ENSG00000169689.15	ENST00000584514.5	882	5	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_4	603.596512581045	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTCTCTCCCAGCTTGGC	-82000763	False	NA	-45	True	AATAAA	-6	NA	82022821	82018715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019640_82019695_82019857_82019910_82022638
transcript_64068.known	chr17	-	752	4	FSM	ENSG00000169689.15	ENST00000580090.5	752	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	706.230525788538	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCCACATTCCTGCCAC	-82000815	True	NA	NA	False	NA	NA	NA	82022873	82018843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82022638
transcript_64073.known	chr17	-	861	4	FSM	ENSG00000169689.15	ENST00000577379.5	861	4	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_3	420.721074136086	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATTCCTGCCACCCGACA	-82000791	True	NA	NA	False	NA	NA	NA	82022849	82018837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019382_82019640_82019695_82019857_82019910_82022638
transcript_64079.known	chr17	-	710	4	FSM	ENSG00000169689.15	ENST00000580435.5	710	4	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	617.10993077949	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000834	True	NA	-32	True	AATAAA	-19	NA	82022892	82018702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019307_82019382_82019857_82019910_82022825
transcript_64080.known	chr17	-	730	5	FSM	ENSG00000169689.15	ENST00000584600.5	730	5	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_1	530.744936386585	580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGGCTTTCTTGCCATTA	-82000800	True	NA	-32	True	AATAAA	-19	NA	82022858	82018702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019307_82019382_82019640_82019695_82019857_82019910_82022825
transcript_64081.known	chr17	-	799	5	FSM	ENSG00000169689.15	ENST00000584347.1	799	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	681.188116455359	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTTCCAGCCATGCGATAT	-82000821	True	NA	-130	True	NA	NA	NA	82022879	82018800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019509_82019695_82019857_82019910_82022825
transcript_64082.known	chr17	-	702	4	FSM	ENSG00000169689.15	ENST00000579520.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	743.185187030946	711	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGCTTTCTTGCCATTAA	NA	False	NA	-31	True	AATAAA	-20	NA	82024107	82018701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82019220_82019292_82019382_82019857_82019910_82024064
transcript_64083.known	chr17	+	1038	6	FSM	ENSG00000169750.9	ENST00000306897.9	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	27.6072454257936	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGCCTCTCACTACCT	82024436	True	NA	23	True	AATAAA	-16	NA	82031677	82034204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82031797_82032386_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_64087.known	chr17	+	831	5	FSM	ENSG00000169750.9	ENST00000580965.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_4	16.015617378047	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGTGAAGAAGCCGGGGAA	82024819	False	NA	NA	False	NA	NA	NA	82032060	82033790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82032459_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_64088.known	chr17	+	730	5	FSM	ENSG00000169750.9	ENST00000584341.1	730	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	63.0966520506437	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTCTGCCCGCCCCC	82021025	False	NA	NA	False	NA	NA	NA	82032183	82033772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82032499_82032710_82032829_82032946_82033010_82033439_82033600_82033698
transcript_64095.known	chr17	-	766	8	FSM	ENSG00000169738.8	ENST00000581584.5	766	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	346.766639169365	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTGAGCTCCCTCCACA	-82037597	False	NA	-92	True	GGGGCT	-7	NA	82037677	82035967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036146_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_6410.known	chr1	+	3831	4	FSM	ENSG00000240563.2	ENST00000498273.2	3831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1727	junction_1	83.1504660239496	1545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGTATACTGTTTGCTTA	62150889	True	NA	22	True	ATTAAA	-16	NA	62194848	62212328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62194922_62196434_62196529_62206518_62207637_62209782
transcript_64103.known	chr17	-	676	8	FSM	ENSG00000169738.8	ENST00000582900.5	676	8	0	0	0	0	multi-exon	TRUE	canonical	3	50	junction_7	336.811822954053	3131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGGCATGACCACGGGTT	-82029184	True	NA	NA	False	NA	NA	NA	82037687	82036017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449_82037542_82037630
transcript_64148.known	chr17	-	968	6	FSM	ENSG00000169738.8	ENST00000578885.5	968	6	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_4	82.0399902486586	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTCTGCTGCCCAGACTA	-82037601	False	NA	-20	True	AATAAA	-3	NA	82037681	82035895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036644_82036720_82036764_82036858_82037014_82037449_82037548_82037630
transcript_64149.known	chr17	-	429	6	FSM	ENSG00000169738.8	ENST00000577712.5	429	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	405.611834146885	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAACCCCACAGTGGTGATG	-82037600	False	NA	NA	False	NA	NA	NA	82037680	82036292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037630
transcript_64161.known	chr17	-	915	7	FSM	ENSG00000169738.8	ENST00000580320.5	915	7	0	0	0	0	multi-exon	FALSE	canonical	3	836	junction_6	77.0814864643616	626	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGTGCTATTCCTAGGCT	-82029195	True	NA	-3	True	AATAAA	-20	NA	82037698	82035878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036644_82036720_82036764_82036858_82037014_82037449
transcript_64162.known	chr17	-	715	5	FSM	ENSG00000169738.8	ENST00000579842.5	715	5	0	0	0	0	multi-exon	FALSE	canonical	3	995	junction_3	34.1860717251924	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	-82036907	False	NA	-5	True	AATAAA	-18	NA	82036987	82035880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383_82036449_82036543_82036764_82036858
transcript_64163.known	chr17	-	631	5	FSM	ENSG00000169738.8	ENST00000582074.5	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_3	18.9208879284245	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAACCTGATTCTGCTGC	-82036848	False	NA	-28	True	NA	NA	NA	82036928	82035903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036449_82036543_82036644_82036720_82036764_82036858
transcript_64164.known	chr17	-	553	3	FSM	ENSG00000169738.8	ENST00000577286.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	1025	junction_1	31.5	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGTGCTATTCCTAGG	-82036555	False	NA	-5	True	AATAAA	-18	NA	82036635	82035880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036064_82036190_82036309_82036383
transcript_64165.known	chr17	-	617	3	FSM	ENSG00000169738.8	ENST00000582613.5	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	979	junction_1	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCCCACCCCAGCCCCAGC	-82037229	False	8503	NA	False	NA	NA	NA	82037309	82036520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82036644_82036720_82036764_82036858
transcript_64166.known	chr17	+	709	2	FSM	ENSG00000264569.2	ENST00000584705.2	713	2	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	82037858	True	NA	3	True	NA	NA	NA	82037904	82039380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82038414_82039180
transcript_64168.known	chr17	+	304	2	FSM	ENSG00000264569.2	ENST00000582558.2	597	2	159	134	130	-134	multi-exon	FALSE	canonical	1	3	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGATTCACCCTCCTTACC	82038017	False	NA	NA	False	NA	NA	NA	82038030	82039246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82038269_82039180
transcript_64169.nnic	chr17	+	710	2	NNC	ENSG00000264569.2	novel	597	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	82037848	False	NA	3	True	NA	NA	NA	82037871	82039380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr17_+_82038382_82039180
transcript_64173.known	chr17	+	1949	14	FSM	ENSG00000169727.13	ENST00000320548.8	1949	14	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_1	460.621396600198	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82051062	False	NA	31	True	ATTAAA	-17	NA	82051874	82057470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82051965_82052374_82052460_82053273_82053367_82053867_82054050_82054509_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_64176.known	chr17	+	1842	13	FSM	ENSG00000169727.13	ENST00000306823.10	1842	13	0	0	0	0	multi-exon	TRUE	canonical	3	214	junction_3	352.891026223236	1234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82038808	True	NA	31	True	ATTAAA	-17	NA	82051908	82057470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82051965_82053273_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_64189.known	chr17	-	1865	8	FSM	ENSG00000169733.12	ENST00000310496.9	1865	8	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	34.2046661096621	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCTCCTGTCTTAGTCA	-82049298	True	NA	-1	True	AGTAAA	-19	NA	82051811	82047901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293_82051343_82051499
transcript_64192.known	chr17	-	994	7	FSM	ENSG00000169733.12	ENST00000429557.7	994	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_6	35.3207524771989	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGGTGATGGGTGTTTTGGG	-82048921	False	NA	NA	False	NA	NA	NA	82051434	82048552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82048808_82049030_82049117_82049676_82049843_82049917_82050007_82050401_82050556_82050661_82050765_82051293
transcript_64197.known	chr17	+	1855	13	FSM	ENSG00000169727.13	ENST00000584460.5	1855	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	485.029058407844	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGCGTTGCTCTTGGCTGTT	82038828	True	NA	24	True	ATTAAA	-10	NA	82051928	82057463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82051965_82053233_82053367_82053867_82054050_82054497_82054811_82054897_82054976_82055161_82055223_82055739_82055826_82056000_82056096_82056285_82056392_82056469_82056551_82056628_82056767_82056839_82056975_82057052
transcript_64198.known	chr17	+	796	3	FSM	ENSG00000169727.13	ENST00000583486.1	796	3	0	0	0	0	multi-exon	FALSE	canonical	3	1365	junction_2	42.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGGCTGTTCTTTCCT	82056501	False	NA	31	True	ATTAAA	-17	NA	82056523	82057470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82056551_82056628_82056767_82056839
transcript_64199.known	chr17	-	1040	4	FSM	ENSG00000169718.18	ENST00000542088.2	1040	4	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_3	101.905184689822	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTGCAAAAGTGAACAATAAA	-82060761	False	NA	-45	True	NA	NA	NA	82060775	82057913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82058255_82058340_82058819_82059947_82060094_82060700
transcript_64200.nic	chr17	-	1660	4	ISM	ENSG00000176155.20	ENST00000389641.9	2997	17	-53	92841	-36	-5961	5prime_fragment	FALSE	canonical	2	7	junction_3	4.92160768674447	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCATTGAGTCTCGTTTGA	-82211688	True	NA	NA	False	AAAAAG	-12	NA	82212866	82194310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr17_-_82195365_82198313_82198423_82201537_82201953_82212784
transcript_64202.known	chr17	-	513	2	FSM	ENSG00000176155.20	ENST00000584717.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTAGCGTTGTTTATCTG	-82106225	True	NA	-6	True	ATTAAA	-30	NA	82106375	82101459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82101867_82106269
transcript_64203.known	chr17	-	2047	10	FSM	ENSG00000141551.15	ENST00000392334.6	2047	10	0	0	0	0	multi-exon	TRUE	canonical	3	171	junction_2	85.7335810145607	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTCTTTTTATTGTTTCT	-82271026	True	NA	18	True	AAGAAA	-2	NA	82273697	82244361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82244832_82245975_82246040_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_64207.known	chr17	-	1580	9	FSM	ENSG00000141551.15	ENST00000398519.9	1580	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	121.170076751647	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCTCCCATCTAACCACCA	-82270757	False	NA	-2	True	AATAAA	-17	NA	82273428	82239726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82240063_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_64208.known	chr17	-	3712	9	FSM	ENSG00000141551.15	ENST00000314028.11	3681	9	-31	0	-31	0	multi-exon	FALSE	canonical	3	177	junction_1	70.8818338857002	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTCCCCTTTCCATGT	NA	False	NA	-13	True	AATAAA	-22	NA	82273731	82242666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82244832_82248874_82249015_82249430_82249603_82251378_82251528_82252433_82252605_82253015_82253245_82255428_82255578_82265685_82265797_82273305
transcript_64212.known	chr17	+	2667	5	FSM	ENSG00000141526.18	ENST00000584689.6	2667	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	18.6731759484026	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	NA	False	NA	NA	False	AATGAA	-15	NA	82228396	82240086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82228530_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_64214.known	chr17	+	2599	5	FSM	ENSG00000141526.18	ENST00000582743.6	2599	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	7.22841614740048	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACATCTCAGGTCCAGCT	82227548	True	NA	NA	False	AATGAA	-15	NA	82229041	82240086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82229107_82235982_82236232_82236728_82236873_82237137_82237894_82238701
transcript_64218.known	chr17	-	598	2	FSM	ENSG00000141551.15	ENST00000579308.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	381	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGAGGCAGGAGAATCGC	-82270735	False	NA	NA	False	NA	NA	NA	82273406	82265299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82265797_82273305
transcript_64219.known	chr17	-	1284	4	FSM	ENSG00000173762.8	ENST00000312648.8	1284	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGACTTCTGCATTTA	-82317579	True	NA	-7	True	AATAAA	-16	NA	82317608	82314872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82315432_82316194_82316410_82316666_82316982_82317413
transcript_64221.known	chr17	+	1935	2	FSM	ENSG00000182459.5	ENST00000333437.5	1935	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTGTGTAAGTCATTCC	82359115	True	NA	NA	False	CATAAA	-14	NA	82359246	82363775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82359286_82361879
transcript_64224.known	chr17	+	2167	13	FSM	ENSG00000169660.17	ENST00000327949.15	2167	13	0	0	0	0	multi-exon	FALSE	canonical	2	53	junction_10	12.4085543969562	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	82416897	True	NA	20	True	AATAAA	-20	NA	82418346	82442645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441076_82441164_82441267_82441799_82441890_82442176
transcript_64225.known	chr17	+	2285	12	FSM	ENSG00000169660.17	ENST00000337014.10	2285	12	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_9	9.2477381643851	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGTGAAGGGTTATTTATG	NA	False	NA	20	True	AATAAA	-20	NA	82418317	82442645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82418741_82419748_82419884_82424393_82424504_82428557_82428646_82433657_82433823_82435688_82435873_82436666_82436739_82437167_82437364_82439630_82439714_82440996_82441267_82441799_82441890_82442176
transcript_64227.known	chr17	-	1652	10	FSM	ENSG00000181396.13	ENST00000329197.9	1652	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	27.5806337495115	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACGTGGGGCCAGCAGCT	-82417237	True	NA	NA	False	CATAAA	-7	NA	82418576	82392009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82392535_82394330_82394544_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
transcript_64228.known	chr17	-	4249	9	FSM	ENSG00000181396.13	ENST00000313056.10	4249	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	13.2382022948737	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGCTGTCGGGAAGGGA	-82417247	True	NA	-14	True	AATAAA	-17	NA	82418586	82389209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82392535_82398195_82398320_82403936_82404091_82405323_82405381_82406417_82406483_82409367_82409411_82411454_82411531_82415397_82415628_82418411
transcript_64231.known	chr17	-	841	8	FSM	ENSG00000178927.18	ENST00000578919.5	841	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_7	89.6369093075173	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCCGTGCACCGCCCACA	-82447545	True	NA	NA	False	NA	NA	NA	82450776	82443891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430_82449481_82450699
transcript_64234.known	chr17	-	1053	7	FSM	ENSG00000178927.18	ENST00000577732.5	1053	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	72.4246735120935	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTGAGCCCGTGCACCGC	-82449532	False	NA	NA	False	NA	NA	NA	82449726	82443848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82449430
transcript_64235.known	chr17	-	2073	7	FSM	ENSG00000178927.18	ENST00000306645.10	2073	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	40.303018910912	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGGTCTCCCTGTGCTGCT	-82447521	True	NA	0	True	NA	NA	NA	82450752	82442585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82449169_82449293_82450699
transcript_64241.known	chr17	-	2050	6	FSM	ENSG00000178927.18	ENST00000434650.6	2050	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	87.5456452372133	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82450635	False	NA	-7	True	CATAAA	-17	NA	82450829	82442643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82449169_82449293_82450699
transcript_64243.known	chr17	-	584	6	FSM	ENSG00000178927.18	ENST00000584503.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	92.2106284546418	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTGCACCGCCCACAGGA	-82447506	True	NA	NA	False	NA	NA	NA	82450737	82443936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82446622_82446697_82447579_82447622_82450699
transcript_64245.known	chr17	-	1965	6	FSM	ENSG00000178927.18	ENST00000584024.5	1965	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	89.2143486217324	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGCAGCTTCCACTCTTT	-82447545	True	NA	-7	True	CATAAA	-17	NA	82450776	82442643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82444125_82444446_82444592_82445863_82445961_82447579_82447622_82449169_82449293_82450699
transcript_64252.known	chr17	-	357	3	FSM	ENSG00000265458.2	ENST00000579095.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATTTTTGGTGGAGA	-82458327	True	NA	NA	False	NA	NA	NA	82458521	82454272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82454414_82457437_82457549_82458416
transcript_64253.known	chr17	+	1487	10	FSM	ENSG00000141562.19	ENST00000345415.11	1487	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	207.362151147202	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAATGGATTACTTTGGTT	82458271	False	NA	13	True	ATTAAA	-18	NA	82458648	82488262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_64254.known	chr17	+	3814	11	FSM	ENSG00000141562.19	ENST00000309794.16	3814	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	198.851929837254	872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGTGAATGGTTGAGTG	82454035	True	NA	27	True	AATAAA	-14	NA	82458740	82490537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_64255.known	chr17	+	1722	12	FSM	ENSG00000141562.19	ENST00000374611.9	1722	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	288.986716501035	429	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATGGATTACTTTGGTTT	82453991	True	NA	14	True	ATTAAA	-19	NA	82458696	82488263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481219_82483173_82483305_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_64256.known	chr17	+	1668	12	FSM	ENSG00000141562.19	ENST00000457415.7	1668	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	288.908089705914	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGGGCTGCCCTGAGTG	82453997	True	NA	-34	True	NA	NA	NA	82458702	82488215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82480406_82480545_82481081_82481212_82483715_82483780_82484812_82484951_82485496_82485655_82487915
transcript_64257.known	chr17	+	2598	10	FSM	ENSG00000141562.19	ENST00000577812.5	2598	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	209.43722357137	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGCTCAATGGATTACTTTG	82454006	True	NA	10	True	ATTAAA	-15	NA	82458711	82488259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82472563_82472699_82478799_82478919_82481081_82481212_82483715_82484951_82485496_82485655_82487915
transcript_64258.known	chr17	+	866	8	FSM	ENSG00000141562.19	ENST00000577432.5	866	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	294.660510293678	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGAGCTGTTCAACGAGGA	82454018	True	NA	NA	False	NA	NA	NA	82458723	82484900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82458831_82459991_82460073_82464286_82464431_82468763_82468897_82478799_82478919_82481081_82481212_82483715_82483780_82484812
transcript_64260.known	chr17	-	2322	10	FSM	ENSG00000141580.16	ENST00000572583.5	2322	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	190.757618814564	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	-82648272	False	NA	-24	True	AATAAA	-20	NA	82648318	82614575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619095_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_64261.known	chr17	-	2496	10	FSM	ENSG00000141580.16	ENST00000392325.9	2496	10	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_8	41.8807831827438	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGTAGAATTGTGTGT	-82643029	True	NA	-10	True	AATAAA	-34	NA	82648444	82614561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_64262.nic	chr17	-	2414	9	NIC	ENSG00000141580.16	novel	2496	10	NA	NA	-30	0	intron_retention	FALSE	canonical	3	80	junction_7	187.266813330606	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGGACCTGTAATGGGAA	-82643063	True	NA	-24	True	AATAAA	-20	NA	82648478	82614575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_82616026_82616523_82616646_82617295_82617398_82619042_82619129_82621608_82621800_82625388_82625484_82627203_82627292_82643948_82644024_82648273
transcript_64267.known	chr17	-	765	5	FSM	ENSG00000141580.16	ENST00000574828.1	765	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	273.383773293149	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTGAAAGTAGCAGGT	-82648507	False	NA	NA	False	AATAAA	-37	NA	82648553	82626788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82627009_82627203_82627292_82630920_82631023_82643948_82644024_82648273
transcript_64268.known	chr17	+	1809	1	FSM	ENSG00000279613.1	ENST00000624661.1	1809	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGATAGGTCCACCCAGAA	NA	False	NA	NA	False	NA	NA	NA	82648848	82650657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82648800_82650700
transcript_64269.known	chr17	-	3829	6	FSM	ENSG00000141542.11	ENST00000571995.6	3829	6	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	3.6	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACTTTGTCATTTTCT	-82698322	True	NA	NA	False	ATTAAA	-6	NA	82698698	82654972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82698454
transcript_64270.known	chr17	-	2189	7	FSM	ENSG00000141542.11	ENST00000269347.10	2189	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	11.4515889242013	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTTGGCGACCGGTTCTTT	-82698311	True	NA	-15	True	AATAAA	-26	NA	82698687	82657066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82658135_82658490_82658714_82659579_82659658_82660986_82661048_82664495_82664557_82696388_82696854_82698454
transcript_64271.known	chr17	-	898	2	FSM	ENSG00000263063.1	ENST00000574471.1	898	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGCGTTGATGAGTTC	-82716242	False	NA	NA	False	NA	NA	NA	82716255	82713907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82714117_82715566
transcript_64276.known	chr17	+	1822	6	FSM	ENSG00000141560.15	ENST00000269373.11	1822	6	0	0	0	0	multi-exon	TRUE	canonical	3	299	junction_4	15.3831076184235	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGTACAAGATTGTATATTTC	82714230	True	NA	35	True	AATAAA	-45	NA	82716705	82728013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82716897_82718905_82719058_82720271_82720364_82722803_82722887_82726479_82726603_82726832
transcript_64282.known	chr17	+	627	4	FSM	ENSG00000141560.15	ENST00000573158.5	627	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	141.951478408019	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCATGAGGAATCTGG	82714311	True	NA	NA	False	NA	NA	NA	82716786	82727143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82716897_82722803_82722887_82726479_82726603_82726832
transcript_64283.known	chr17	+	684	5	FSM	ENSG00000141556.22	ENST00000576432.5	684	5	0	0	0	0	multi-exon	FALSE	canonical	3	507	junction_2	53.3590432822778	269	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTGCCTTTTGTCTCTG	82937186	False	NA	19	True	TATAAA	-16	NA	82937215	82942704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_82937361_82938048_82938137_82939366_82939477_82941398_82941484_82942448
transcript_64293.known	chr17	-	1383	13	FSM	ENSG00000175711.9	ENST00000320865.4	2985	13	-40	1642	-1	0	multi-exon	TRUE	canonical	3	120	junction_5	16.1012421881046	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-83050426	True	NA	-6	True	AATAAA	-21	NA	83051810	82943790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83005114_83005211_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_64300.nnic	chr17	-	1312	12	NIC	ENSG00000175711.9	novel	2985	13	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	6	junction_7	41.2637154759	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAACCCAAGGCTCTTTTA	-83050451	True	NA	-6	True	AATAAA	-21	NA	83051835	82943790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr17_-_82944050_82946878_82946984_82956694_82956770_82957180_82957250_82957358_82957495_82961056_82961182_82965650_82965747_83014453_83014520_83035034_83035100_83048470_83048571_83048668_83048786_83051736
transcript_64320.known	chr17	+	1690	4	FSM	ENSG00000176845.13	ENST00000320095.12	1690	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	21.4527905462721	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGCCGGAGTCTGTC	83078434	True	NA	34	True	AATAAA	-17	NA	83079608	83095122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr17_+_83079986_83084937_83085324_83093166_83093227_83094255
transcript_64330.known	chr18	-	2033	21	FSM	ENSG00000079134.13	ENST00000580038.5	2033	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	124.25718289097	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTACAGTCGGCTGG	-262342	True	NA	-14	True	AATAAA	-14	NA	268022	214520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247909_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_64331.known	chr18	-	2108	21	FSM	ENSG00000079134.13	ENST00000261600.11	2108	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	94.2741215816939	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262367	True	NA	-13	True	AATAAA	-15	NA	268047	214519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_64334.nic	chr18	-	2141	21	NIC	ENSG00000079134.13	novel	2108	21	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	123.431316933751	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262379	True	NA	-13	True	AATAAA	-15	NA	268059	214519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224201_224923_224995_225088_225140_225336_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_64341.known	chr18	-	2277	20	FSM	ENSG00000079134.13	ENST00000579232.5	2277	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	96.7223802259079	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTGTACAGTCGGCTGGT	-262339	True	NA	-13	True	AATAAA	-15	NA	268019	214519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428_215505_216485_216634_218885_218970_223439_223506_224083_224180_224923_224995_225088_225404_226800_226902_246323_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_64349.known	chr18	+	4972	16	FSM	ENSG00000101557.15	ENST00000261601.8	4972	16	0	0	0	0	multi-exon	FALSE	canonical	3	512	junction_10	46.9545406631658	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTGTCTCATTGTCATT	147391	True	NA	10	True	AATAAA	-22	NA	158556	214629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_158715_163307_163454_166786_166820_178932_179038_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_64352.known	chr18	+	1803	15	FSM	ENSG00000101557.15	ENST00000582707.5	1803	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	151.095455704974	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCATTTGGAACAAAAGAGG	158372	True	NA	NA	False	NA	NA	NA	158382	211391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_158715_163307_163454_166786_166820_180235_180340_192841_192901_196636_196768_197615_197697_198046_198133_199201_199317_202879_202946_203097_203191_204563_204693_209970_210032_210385_210494_211132
transcript_64354.nic	chr18	-	1214	11	ISM	ENSG00000079134.13	ENST00000582313.5	1811	12	-32	1120	-9	0	5prime_fragment	FALSE	canonical	3	389	junction_7	22.8221383748325	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATGTCTATATATTTTA	-262379	True	NA	NA	False	AATAAA	-15	NA	268059	246067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_246456_247848_247958_252538_252613_254272_254356_259179_259276_259681_259731_260185_260305_264025_264093_265302_265364_265456_265531_267965
transcript_64356.known	chr18	-	789	4	FSM	ENSG00000079134.13	ENST00000578224.5	789	4	0	0	0	0	multi-exon	FALSE	canonical	3	390	junction_2	5.35412613473634	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAGAGAATTGTGTACAG	-262339	True	NA	NA	False	AAGAAA	-6	NA	268019	263492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_264093_265302_265364_265456_265531_267965
transcript_64357.known	chr18	-	751	2	FSM	ENSG00000079134.13	ENST00000577429.5	751	2	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTGTACAGTCGGCTGG	-215761	False	NA	-14	True	AATAAA	-14	NA	215778	214520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_214922_215428
transcript_64361.nnic	chr18	+	790	2	Genic_Genomic	ENSG00000263884.1	novel	2131	1	NA	NA	374	22753	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTGTTGCTCGCAAGCT	268365	False	NA	NA	False	AATAAA	-44	NA	268521	293031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr18_+_268874_292593
transcript_64362.known	chr18	+	2131	1	FSM	ENSG00000263884.1	ENST00000581677.1	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATGATTTAATTCAGAA	267991	True	NA	NA	False	ATTAAA	-19	NA	268147	270278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_268100_270300
transcript_64368.known	chr18	-	5362	16	FSM	ENSG00000132199.20	ENST00000647584.2	5362	16	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	21.7300611033553	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCATGCCTGAAAT	-710562	True	NA	NA	False	ATTAAA	-24	NA	712630	670317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_64378.known	chr18	-	1296	15	FSM	ENSG00000132199.20	ENST00000585128.6	1296	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	37.9056293272368	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTATTACTTGATTCTT	-710455	True	NA	NA	False	NA	NA	NA	712523	674160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_691067_691107_691203_691277_693881_693909_694247_694335_706469_706579_712503
transcript_6439.known	chr1	+	3507	9	FSM	ENSG00000162607.13	ENST00000371146.5	3507	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	77.792090696934	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAGTGTGTGTATATATA	62436286	True	NA	78	True	TATAAA	-24	NA	62436303	62451802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62436563_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_6440.known	chr1	+	3602	9	FSM	ENSG00000162607.13	ENST00000339950.5	3602	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_4	16.7760990698076	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTGTGTGTATATATATA	62434629	True	NA	80	True	TATAAA	-26	NA	62437048	62451804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737_62445430_62447340_62447512_62448464_62448667_62450245
transcript_64402.known	chr18	-	1397	13	FSM	ENSG00000132199.20	ENST00000580982.5	1397	13	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	51.1172399707009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCTGGCACCTAGACATTA	-710547	True	NA	-53	True	NA	NA	NA	712615	674039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_677344_677445_677742_677873_678695_678738_683245_683381_685920_686009_688573_688609_690548_690632_693881_693909_694247_694335_706469_706579_712503
transcript_64421.known	chr18	+	1613	7	FSM	ENSG00000176890.16	ENST00000323274.15	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_1	116.514305273358	402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGCTGTATTCTGGTTT	651141	True	NA	9	True	ATTAAA	-19	NA	657652	673578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_657948_659640_659715_662145_662321_669071_669174_670691_670868_671379_671452_672859
transcript_64423.known	chr18	+	1327	6	FSM	ENSG00000176890.16	ENST00000323224.7	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	305.469212851312	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTCTGCATTCGTCCACGC	651231	False	NA	5	True	AATAAA	-5	NA	657742	673484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_657948_659640_659715_662145_662321_670691_670868_671379_671452_672859
transcript_64424.known	chr18	-	699	6	FSM	ENSG00000132199.20	ENST00000580605.5	699	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	43.6284310971642	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCCTTGAAGAGTGTTG	-710542	True	NA	NA	False	AAAACA	-9	NA	712610	692922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_693176_693881_693909_694247_694335_697239_697356_706469_706579_712503
transcript_64433.nnic	chr18	-	547	2	FSM	ENSG00000176912.6	ENST00000688642.1	487	2	-60	0	-60	0	multi-exon	FALSE	canonical	2	24	junction_1	0	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-657579	False	NA	-9	True	AATAAA	-20	NA	657655	649619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_657453
transcript_64436.known	chr18	-	844	2	FSM	ENSG00000176912.6	ENST00000323813.4	991	2	0	147	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	1782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCACGTAGTGTTTGGTC	-658264	False	NA	-9	True	AATAAA	-20	NA	658340	649619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_649965_657841
transcript_64437.known	chr18	-	443	3	FSM	ENSG00000132199.20	ENST00000581928.5	443	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	75.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCCTCAGGAATCAGCTAA	-683365	False	NA	NA	False	TTTAAA	-41	NA	683380	674180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_674407_675320_675403_683245
transcript_64438.known	chr18	-	4605	12	FSM	ENSG00000176105.14	ENST00000314574.5	4605	12	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_3	45.5277592190098	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTGGTCAATTTTCT	-804607	True	NA	0	True	ATTAAA	-22	NA	812242	721587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_724633_732833_732966_736807_736962_739734_739812_742917_743098_743259_743416_745707_745858_745947_746052_747919_748019_751704_751805_756556_756836_812113
transcript_64443.known	chr18	+	483	1	FSM	ENSG00000273355.1	ENST00000610185.1	483	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTGCCTTTCTTCACTA	813131	False	NA	9	True	ATTAAA	-17	NA	813273	813756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_813300_813800
transcript_64444.known	chr18	+	232	1	FSM	ENSG00000266575.1	ENST00000584794.1	232	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGACTGGAAGCTGCAC	NA	False	NA	NA	False	NA	NA	NA	832237	832469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_832200_832500
transcript_64448.nnic	chr18	-	396	3	Antisense	novelGene_ENSG00000266602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	1	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	1522252	1513897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_1514048_1514276_1514414_1522143
transcript_6445.nic	chr1	+	1564	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-483	6964	262	1520	5prime_fragment	FALSE	canonical	3	216	junction_4	18.2756668824971	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAAGTAAAAAATGTGGC	62436555	False	NA	NA	False	AAGAAA	-21	NA	62436565	62444840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_64450.nnic	chr18	-	259	2	Antisense	novelGene_ENSG00000266602.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCATGTATTTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	1522252	1513897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_1514048_1522143
transcript_64459.nnic	chr18	-	1520	2	Intergenic	novelGene_21	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATTGATGGATTAATATT	NA	False	NA	NA	False	ATTAAA	-15	NA	2247730	2242358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr18_-_2243661_2247512
transcript_64462.known	chr18	-	3684	9	FSM	ENSG00000101574.15	ENST00000574538.2	3684	9	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	14.0484652186636	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATTTGAATTCTTTCCA	-2570661	True	NA	-4	True	ATTAAA	-22	NA	2571505	2537529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_2539146_2544194_2544287_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_6447.nic	chr1	+	1819	6	ISM	ENSG00000162607.13	ENST00000339950.5	3602	9	-483	6709	262	1775	5prime_fragment	FALSE	canonical	3	216	junction_4	18.2756668824971	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACAAGTGATACATTAGA	62436555	False	NA	21	True	AAAAAG	-5	NA	62436565	62445095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_62437401_62439798_62440038_62441487_62441609_62442194_62442300_62443158_62443320_62444737
transcript_64470.known	chr18	-	3601	8	FSM	ENSG00000101574.15	ENST00000319888.10	3601	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	26.435134320268	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTCTTTCCAGCTTC	NA	False	NA	1	True	ATTAAA	-27	NA	2571509	2537524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_2539146_2544652_2544760_2547354_2547530_2552694_2552765_2554668_2555039_2563796_2563860_2566820_2567655_2571148
transcript_64472.known	chr18	+	2126	17	FSM	ENSG00000080986.13	ENST00000261597.9	2126	17	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_4	26.943227349373	888	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTCTCTCTCATTTCTTA	2567824	True	NA	14	True	AATAAA	-20	NA	2571556	2616635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_2571684_2572976_2573087_2574988_2575067_2577745_2577870_2577968_2578142_2578926_2579030_2585112_2585203_2587829_2587924_2589203_2589311_2590017_2590163_2595415_2595622_2599018_2599172_2601395_2601486_2606414_2606508_2608699_2608831_2610758_2610862_2616436
transcript_64473.known	chr18	+	775	4	FSM	ENSG00000132205.11	ENST00000583776.1	775	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	2.62466929133727	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCCAGCGTGGCCCAGCTG	2905994	False	NA	NA	False	NA	NA	NA	2906568	2913162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_2907086_2908942_2908976_2909690_2909820_2913066
transcript_64476.known	chr18	-	686	1	FSM	ENSG00000272688.1	ENST00000609924.1	686	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATCGGAGTCTTTAAGG	-3247074	False	NA	NA	False	AATAAA	-25	NA	3247086	3246400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3246400_3247100
transcript_6448.known	chr1	-	122	2	FSM	ENSG00000116641.18	ENST00000636635.1	122	2	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGCACCTTCGGTGTGCA	-62688241	False	NA	NA	False	AATGAA	-16	NA	62688282	62687590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_62687657_62688226
transcript_64491.known	chr18	+	1004	5	FSM	ENSG00000101608.13	ENST00000578611.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1851.53468439022	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAATTAAACTTTATGATA	3229354	True	NA	-11	True	AATATA	-40	NA	3247812	3256211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247910_3249360_3249444_3253232_3253429_3253888_3254051_3255745
transcript_64497.known	chr18	+	947	4	FSM	ENSG00000101608.13	ENST00000579226.5	947	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1729.07920260724	931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAAAATACTTACTTGTTT	3247469	False	NA	5	True	ATTAAA	-7	NA	3247480	3256227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247588_3253232_3253429_3253888_3254051_3255745
transcript_64511.known	chr18	+	1025	4	FSM	ENSG00000118680.14	ENST00000400175.9	1025	4	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	1201.4364550635	980	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	3262592	False	NA	38	True	AATAAA	-28	NA	3262612	3278284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3262757_3272883_3273083_3277252_3277415_3277764
transcript_64512.known	chr18	+	1064	4	FSM	ENSG00000118680.14	ENST00000584539.1	1064	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1247.48342229021	983	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGCAAGTTAAACAAATGAT	3262935	False	NA	38	True	AATAAA	-28	NA	3262955	3278284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3263139_3272883_3273083_3277252_3277415_3277764
transcript_64515.known	chr18	-	725	3	FSM	ENSG00000264235.6	ENST00000581905.2	725	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAAGCCTTACGGTTCCTT	NA	False	NA	NA	False	AATAAA	-17	NA	3261850	3255435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3255839_3256241_3256323_3261609
transcript_64516.known	chr18	+	614	2	FSM	ENSG00000101608.13	ENST00000585090.1	614	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAAGACTCGACTTTATG	3229402	True	NA	NA	False	AATAAA	-21	NA	3247860	3249925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247910_3249360
transcript_64517.known	chr18	+	738	1	FSM	ENSG00000101608.13	ENST00000608786.1	738	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	132	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTATTTGTTTCATGTTC	3229448	False	NA	9	True	AATAAA	-21	NA	3247906	3248644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247900_3248600
transcript_64518.known	chr18	+	1163	4	FSM	ENSG00000118680.14	ENST00000237500.10	1163	4	0	0	0	0	multi-exon	FALSE	canonical	3	2517	junction_2	103.866367136924	14651	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACGCTTCTAGTCAGATG	3239448	True	NA	NA	False	AGTAAA	-21	NA	3262132	3278461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3262238_3272883_3273083_3277252_3277415_3277764
transcript_64519.known	chr18	+	958	4	FSM	ENSG00000101608.13	ENST00000217652.8	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	3328	junction_1	223.402476858845	22293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACTTGTTTAAACTTCTT	3229342	True	NA	14	True	ATTAAA	-16	NA	3247800	3256236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3247910_3253232_3253429_3253888_3254051_3255745
transcript_64520.known	chr18	+	1670	4	FSM	ENSG00000177426.22	ENST00000401449.5	1670	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	572.32236448429	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	NA	False	NA	12	True	AATAAA	-12	NA	3411926	3458406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3412255_3418142_3418216_3456353_3456581_3457364
transcript_64521.known	chr18	+	1585	4	FSM	ENSG00000177426.22	ENST00000407501.6	1585	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	512.255795477221	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATCTAGTTGGTTGA	3449860	False	NA	10	True	AATAAA	-23	NA	3449881	3458349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3450071_3450321_3450506_3456353_3456581_3457364
transcript_64528.known	chr18	+	3030	3	FSM	ENSG00000177426.22	ENST00000618001.4	3030	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	583.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTATTTGTGTTTTTGAA	3447183	True	NA	NA	False	AATATA	-23	NA	3447608	3459978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3447798_3456353_3456581_3457364
transcript_64532.known	chr18	+	801	3	FSM	ENSG00000177426.22	ENST00000549780.5	801	3	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	601.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCGGACCTCAACCAGGAC	3448260	False	NA	NA	False	AATACA	-35	NA	3448498	3457839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3448598_3456353_3456581_3457364
transcript_64537.known	chr18	+	563	3	FSM	ENSG00000177426.22	ENST00000549253.5	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	612	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGTGGGGCCAAGATTTCTG	3449361	False	NA	NA	False	NA	NA	NA	3449412	3457456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3449657_3456353_3456581_3457364
transcript_64539.known	chr18	+	1689	3	FSM	ENSG00000177426.22	ENST00000405385.7	1689	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	591	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTGTTGTAATTCAGA	3449534	False	NA	12	True	AATAAA	-12	NA	3449650	3458406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3450071_3456353_3456581_3457364
transcript_64541.known	chr18	+	1088	3	FSM	ENSG00000177426.22	ENST00000345133.9	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	601.5	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTAGAAACAAAGGGTTTT	3449594	True	NA	-80	True	TATAAA	-11	NA	3451669	3458123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3451772_3456353_3456581_3457364
transcript_64545.known	chr18	+	1980	3	FSM	ENSG00000177426.22	ENST00000330513.10	1980	3	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	571	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGTAATTCAGAGTATT	3449601	True	NA	17	True	AATAAA	-17	NA	3451676	3458411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3452383_3456353_3456581_3457364
transcript_64554.known	chr18	+	623	4	FSM	ENSG00000266835.6	ENST00000578664.2	623	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.48528137423857	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466179	True	NA	3	True	AATAAA	-19	NA	3466290	3478978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467271_3473953_3474143_3478755
transcript_64555.known	chr18	+	643	4	FSM	ENSG00000266835.6	ENST00000579007.5	643	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.73053390247253	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466185	True	NA	3	True	AATAAA	-19	NA	3466296	3478978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467297_3473953_3474143_3478755
transcript_64556.nnic	chr18	+	456	3	NNC	ENSG00000266835.6	novel	623	4	NA	NA	-48	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466191	False	NA	3	True	AATAAA	-19	NA	3466201	3478978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_3466358_3467126_3467204_3478755
transcript_64557.known	chr18	+	613	3	FSM	ENSG00000266835.6	ENST00000581029.5	613	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGACTGGCTGTTCCCTCAT	3466138	True	NA	NA	False	AATAAA	-23	NA	3466249	3473203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467271_3472842
transcript_64558.nnic	chr18	+	523	3	NIC	ENSG00000266835.6	novel	623	4	NA	NA	-48	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	9.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGGGTCTAGTTACCTTTCC	3466191	False	NA	3	True	AATAAA	-19	NA	3466201	3478978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_3466358_3467126_3467271_3478755
transcript_64559.known	chr18	+	450	3	FSM	ENSG00000266835.6	ENST00000581442.5	450	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAACTTGGCACTTAG	3466138	True	NA	-48	True	CATAAA	-35	NA	3466249	3478927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3466358_3467126_3467297_3478755
transcript_6456.known	chr1	+	2890	11	FSM	ENSG00000125703.15	ENST00000371120.7	2890	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	44.2809213996276	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTTTCTTTAGTCTAAA	62782062	True	NA	3	True	AATAAA	-15	NA	62784134	62865513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62784226_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_64561.known	chr18	-	1898	7	FSM	ENSG00000170579.17	ENST00000639615.1	1898	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	10.8012344973464	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGAAGACATGACTCCTCC	NA	False	NA	NA	False	NA	NA	NA	4151290	3708463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3708502_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179
transcript_64566.known	chr18	-	2188	9	FSM	ENSG00000170579.17	ENST00000400145.6	2188	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	8.52111348357713	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCAACTTCCTTACACCCC	NA	False	NA	73	True	AATAAA	-35	NA	3845296	3502136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3845231
transcript_64568.nic	chr18	-	588	3	ISM	ENSG00000170579.17	ENST00000400145.6	2188	9	311034	82	195116	0	3prime_fragment	FALSE	canonical	3	24	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	NA	False	NA	-9	True	ATTAAA	-20	NA	3534262	3502218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_3502646_3508569_3508662_3534193
transcript_64569.nic	chr18	-	435	3	NIC	ENSG00000170579.17	novel	345	3	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	17.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTAAATCAAAATAAAAT	NA	False	NA	NA	False	TTTAAA	-10	NA	4151290	3986416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_3986655_4005115_4005202_4151179
transcript_64570.known	chr18	-	285	2	FSM	ENSG00000170579.17	ENST00000578250.6	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATTTCAAAGTAAAAGG	NA	False	NA	NA	False	ATTAAA	-34	NA	4151287	4005024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_4005202_4151179
transcript_64571.known	chr18	-	3525	12	FSM	ENSG00000170579.17	ENST00000581527.5	3525	12	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	5.19535711353802	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCACTGGAAGGAACTGCC	-4452629	True	NA	-9	True	ATTAAA	-20	NA	4455266	3502218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_3502646_3508569_3508662_3534193_3534616_3567489_3567582_3581874_3582249_3729134_3729376_3742334_3742513_3814058_3814274_3879111_3880141_4005115_4005202_4151179_4151288_4455005
transcript_64572.known	chr18	+	501	4	FSM	ENSG00000177337.9	ENST00000573355.3	543	4	42	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.54247233265651	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGTGGGGTAGCTGGTTG	3593905	True	NA	16	True	AATAAA	-27	NA	3594111	3597385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3594419_3594485_3596578_3596676_3597175
transcript_64573.nnic	chr18	+	500	4	NNC	ENSG00000177337.9	novel	543	4	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	8.9566858950296	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	3593853	True	NA	3	True	AATAAA	-14	NA	3594059	3597372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_3594241_3594419_3594485_3596578_3596676_3597215
transcript_64574.known	chr18	+	408	3	FSM	ENSG00000177337.9	ENST00000574411.5	408	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	3593920	True	NA	3	True	AATAAA	-14	NA	3594126	3597372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3596578_3596676_3597175
transcript_64576.known	chr18	+	1977	3	FSM	ENSG00000177337.9	ENST00000317114.3	1979	3	2	0	2	0	multi-exon	FALSE	canonical	3	19	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAAAAATTCTGTCTC	3593896	True	NA	NA	False	NA	NA	NA	3594102	3598352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3594419_3594485_3596578
transcript_64578.known	chr18	+	391	3	FSM	ENSG00000177337.9	ENST00000576606.6	398	3	0	7	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTGACTCTGAGACTGTG	3593905	True	NA	3	True	AATAAA	-14	NA	3594111	3597372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3594241_3594419_3594485_3597175
transcript_64580.nnic	chr18	+	722	2	FSM	ENSG00000262001.2	ENST00000693339.1	610	2	-112	0	-72	0	multi-exon	FALSE	canonical	3	9	junction_1	0	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTCATCGCTGTTCTC	3603843	True	NA	8	True	AATAAA	-28	NA	3603855	3610094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_3604216_3609732
transcript_64584.nnic	chr18	-	1269	3	NNC	ENSG00000266268.5	novel	561	5	NA	NA	-91	-194610	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_2	5.5	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTACCTAACAT	-5004565	True	NA	NA	False	AATAAA	-21	NA	5004628	5002544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_5003290_5003974_5004004_5004133
transcript_64586.nnic	chr18	-	932	3	NNC	ENSG00000266268.5	novel	561	5	NA	NA	-102	-194610	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	2.5	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTTTTACCTAACAT	-5004576	False	NA	NA	False	AATAAA	-21	NA	5004639	5002544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_5003290_5003974_5004004_5004481
transcript_64587.known	chr18	-	825	4	FSM	ENSG00000198081.11	ENST00000582388.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	65.0589476295664	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCATGGAGACCCCAGAATC	-5295686	False	742	NA	False	NA	NA	NA	5295702	5291544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295651
transcript_64588.known	chr18	-	3528	4	FSM	ENSG00000198081.11	ENST00000357006.8	3528	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	52.6898683071254	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTCTTTTCATTTTTTCA	-5295298	True	NA	1	True	TATAAA	-20	NA	5296040	5289018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5292205_5293243_5293328_5293971_5294002_5295812
transcript_64594.known	chr18	+	4206	3	FSM	ENSG00000263753.9	ENST00000660030.2	4212	3	6	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	7.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAATAGGTACTCAAAACTCA	5237409	True	NA	-7	True	ATTAAA	-22	NA	5238080	5246492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239197_5241698_5241890_5243593
transcript_64595.known	chr18	+	4017	3	FSM	ENSG00000263753.9	ENST00000582008.6	4017	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	8	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGACTTTCTAGTTATT	5237390	True	NA	9	True	ATTAAA	-38	NA	5238061	5246508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241813_5243593
transcript_64596.known	chr18	+	4461	3	FSM	ENSG00000263753.9	ENST00000657250.1	4461	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	1	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCAGTTTCAGCTACCTC	5237390	True	NA	NA	False	NA	NA	NA	5238061	5246875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241890_5243593
transcript_64597.known	chr18	-	1814	3	FSM	ENSG00000198081.11	ENST00000400143.7	1814	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	59	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGCGGTGGGACAGGGACAC	-5296179	False	NA	NA	False	NA	NA	NA	5296195	5290857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5292205_5293243_5293328_5295812
transcript_64599.known	chr18	+	2034	1	FSM	ENSG00000263753.9	ENST00000581471.2	2034	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATTGCCAGTTAGTATT	5237786	True	NA	NA	False	AATAAA	-19	NA	5237825	5239859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5237800_5239900
transcript_64600.known	chr18	+	1426	3	FSM	ENSG00000263753.9	ENST00000662359.1	1426	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCATTTCCAGAACTTTT	5237397	True	NA	NA	False	TATAAA	-32	NA	5238068	5290339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_5239050_5241698_5241890_5290085
transcript_64602.known	chr18	-	3972	21	FSM	ENSG00000082397.18	ENST00000544123.5	3972	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	44.379358940841	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTTGTATGTTTAATAAT	-5540545	False	NA	0	True	AATAAA	-25	NA	5540556	5392380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_5393479_5395066_5395148_5395608_5395708_5396200_5396333_5397057_5397427_5398020_5398144_5406776_5406969_5407700_5407737_5410565_5410620_5419710_5419932_5423377_5423554_5424261_5424360_5428312_5428466_5433468_5433557_5433902_5434122_5438034_5438111_5443837_5443881_5445139_5445245_5478240_5478439_5489000_5489195_5540339
transcript_64605.known	chr18	-	748	2	FSM	ENSG00000235552.5	ENST00000583065.1	748	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTCTAAATGTCTTAAGAA	-6461078	True	NA	NA	False	NA	NA	NA	6463015	6462151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6462817_6462932
transcript_64608.nnic	chr18	-	897	2	NNC	ENSG00000235552.5	novel	748	2	NA	NA	0	46	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGACACTGACA	-6461093	True	NA	NA	False	ATTAAA	-25	NA	6463030	6462097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_6462897_6462932
transcript_64609.nnic	chr18	-	772	2	NNC	ENSG00000235552.5	novel	748	2	NA	NA	-1	43	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0	13843	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACACTG	-6461094	False	NA	NA	False	ATTAAA	-22	NA	6463031	6462100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_6462774_6462932
transcript_6461.known	chr1	+	2944	11	FSM	ENSG00000125703.15	ENST00000317868.9	2944	11	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	34.9422380508175	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTTCTTTAGTCTAAATAC	62782059	True	NA	6	True	AATAAA	-18	NA	62784131	62865516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_62784274_62803718_62803863_62805171_62805256_62816574_62816809_62819004_62819336_62821138_62821210_62829039_62829177_62834037_62834117_62834775_62834853_62841427_62841548_62863991
transcript_64610.known	chr18	-	867	1	FSM	ENSG00000235552.5	ENST00000489915.1	867	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63145	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTCTTAAGAACCTAATTA	-6461073	True	NA	NA	False	NA	NA	NA	6463010	6462143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6462100_6463000
transcript_64613.known	chr18	-	491	2	FSM	ENSG00000266441.1	ENST00000577327.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATCACATTAACAGATACC	-6729834	False	104	NA	False	NA	NA	NA	6729862	6728820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6729169_6729719
transcript_64614.known	chr18	-	545	4	FSM	ENSG00000265933.5	ENST00000578497.5	545	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTCAGATTCATTTAGT	-6929918	True	NA	NA	False	AATACA	-43	NA	6929962	6927305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6927585_6928119_6928220_6928850_6928969_6929914
transcript_64616.known	chr18	-	9642	63	FSM	ENSG00000101680.16	ENST00000389658.4	9642	63	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_44	47.2915135395517	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGAAGCCTTTTATTTCT	-7111114	True	NA	-2	True	AATACA	-18	NA	7117797	6941741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_6942240_6943179_6943403_6947162_6947297_6948402_6948557_6949100_6949260_6950781_6950972_6955352_6955466_6956635_6956766_6958476_6958663_6959340_6959493_6961585_6961760_6961944_6962060_6964661_6964804_6965287_6965433_6966146_6966298_6971856_6971982_6973056_6973208_6974902_6975037_6975936_6976081_6977726_6977882_6978195_6978379_6980520_6980638_6982496_6982591_6983098_6983235_6985236_6985401_6985526_6985644_6986136_6986348_6992560_6992721_6993640_6993753_6995356_6995447_6997741_6997885_6999444_6999639_6999910_6999998_7002263_7002386_7007138_7007277_7008487_7008609_7009238_7009367_7010199_7010386_7011299_7011480_7011994_7012139_7013814_7014052_7015721_7015859_7016490_7016672_7017277_7017385_7023163_7023376_7024379_7024467_7025978_7026107_7032065_7032177_7032983_7033096_7034478_7034691_7035986_7036089_7037577_7037752_7038809_7038951_7040075_7040237_7042144_7042251_7043226_7043406_7044721_7044840_7046277_7046368_7049077_7049258_7050693_7050937_7079974_7080088_7080286_7080458_7117659
transcript_64621.known	chr18	-	616	4	FSM	ENSG00000266149.1	ENST00000580491.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTGATAAGAGTTCTGCTT	NA	False	NA	NA	False	AATAAA	-24	NA	8367034	8360819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_8361092_8364908_8364990_8365744_8365830_8366856
transcript_64625.known	chr18	-	818	2	FSM	ENSG00000265962.2	ENST00000579368.2	896	2	78	0	78	0	multi-exon	FALSE	canonical	3	9	junction_1	0	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTGTGTAAAATTATTGT	-8707566	False	NA	NA	False	AATAAA	-15	NA	8707621	8695855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_8696122_8707069
transcript_64630.nic	chr18	+	1329	8	NIC	ENSG00000101745.17	novel	1338	9	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	33.9783844855063	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATCAGACTTTAATGG	9136733	False	NA	NA	False	AATAAA	-13	NA	9136744	9235820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
transcript_64631.nic	chr18	+	1678	8	NIC	ENSG00000101745.17	novel	11284	13	NA	NA	-36	469	combination_of_known_junctions	FALSE	canonical	3	74	junction_3	15.0319387862467	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAGGAAAAGAAAATACAA	9136733	False	NA	51	True	AATAAA	-33	NA	9136744	9254742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_9136966_9182381_9182520_9195550_9195699_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9254210
transcript_64643.known	chr18	+	1338	9	FSM	ENSG00000101745.17	ENST00000540578.6	1338	9	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_8	39.5725204529608	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTCATCAGACTTTAATGG	9128502	True	NA	NA	False	AATAAA	-13	NA	9136804	9235820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9136966_9182381_9182520_9195550_9195699_9204475_9204545_9208656_9208804_9211583_9211785_9216757_9216901_9221851_9222000_9235637
transcript_64644.known	chr18	+	390	2	FSM	ENSG00000101745.17	ENST00000577992.1	390	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTCTGACAGTGACAGCA	9128493	True	NA	NA	False	NA	NA	NA	9136795	9182470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9137097_9182381
transcript_64670.known	chr18	-	770	4	FSM	ENSG00000266053.3	ENST00000582375.2	856	4	0	86	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.86744175568088	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTTGTTGTAAGGTTA	-9136612	False	NA	1	True	AATAAA	-20	NA	9136645	9121264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9121457_9132222_9132399_9133390_9133511_9136363
transcript_64678.known	chr18	+	868	2	FSM	ENSG00000178127.13	ENST00000497577.2	868	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAACTGTTTTCTG	9082305	True	NA	NA	False	NA	NA	NA	9102694	9103856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9102798_9103091
transcript_64680.known	chr18	-	779	1	FSM	ENSG00000266053.3	ENST00000608008.1	779	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTCCTGATTTCTCC	-9136458	False	124	-1	True	ATTAAA	-20	NA	9136491	9135712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9135700_9136500
transcript_64681.known	chr18	+	857	8	FSM	ENSG00000178127.13	ENST00000318388.11	857	8	0	0	0	0	multi-exon	FALSE	canonical	3	3359	junction_2	229.953056433841	12455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTATTTGTTTATTCTGCTC	9082309	True	NA	28	True	AATAAA	-25	NA	9102698	9134341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9102798_9117837_9117904_9119325_9119389_9119473_9119591_9122512_9122682_9124873_9124984_9126830_9126908_9134185
transcript_64682.known	chr18	+	1003	1	FSM	ENSG00000273284.1	ENST00000609701.1	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGAGTCAGTTTGTTT	9259376	False	NA	7	True	AATAAA	-20	NA	9259387	9260390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9259400_9260400
transcript_64685.nnic	chr18	-	1031	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-18	-7986	at_least_one_novel_splicesite	TRUE	canonical	3	4	junction_1	8	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	-9334131	True	NA	NA	False	AATAAA	-18	NA	9334463	9318507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319121_9322061_9322153_9334136
transcript_64686.nnic	chr18	-	1152	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-78	-7986	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	6	68	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTGCTGCATTGCTGTATC	NA	False	NA	NA	False	AATAAA	-18	NA	9334523	9318507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_64688.nnic	chr18	-	1033	3	NNC	ENSG00000264964.2	novel	5142	3	NA	NA	-78	-8105	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	6	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAACTTTTAACAATTTCT	NA	False	NA	-3	True	AATAAA	-17	NA	9334523	9318626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_9319182_9322061_9322153_9334136
transcript_64689.known	chr18	+	2311	7	FSM	ENSG00000128791.12	ENST00000583147.5	2311	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	122.206110049102	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATCTCAATCTTAAA	9330625	True	NA	9	True	AATAAA	-39	NA	9334766	9400817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9388039_9388141_9388363_9388421_9396279_9396547_9399345
transcript_64691.nnic	chr18	+	615	5	NNC	ENSG00000128791.12	novel	2311	7	NA	NA	25	-903	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	124.762524421398	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGGTAGGAAAATATCC	9330656	True	NA	NA	False	NA	NA	NA	9334797	9396164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_9334921_9337192_9337353_9359971_9360072_9388039_9388141_9396033
transcript_64692.known	chr18	+	3750	5	FSM	ENSG00000128791.12	ENST00000262120.10	3750	5	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_4	10.3531396204243	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTCATATTTTTTGTTA	9330631	True	NA	10	True	AATAAA	-13	NA	9334772	9402420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279_9396547_9399345
transcript_64697.nnic	chr18	+	789	4	NNC	ENSG00000128791.12	novel	1119	4	NA	NA	25	-29174	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	113.148869489123	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACATTTTCTTTATCCAT	9330656	True	NA	NA	False	TATAAA	-19	NA	9334797	9367893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_9334921_9337192_9337353_9359971_9360072_9367487
transcript_64698.known	chr18	+	1119	4	FSM	ENSG00000128791.12	ENST00000581641.1	1119	4	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	3.2659863237109	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGATAAAGAGGCATGT	9330708	True	NA	NA	False	NA	NA	NA	9334849	9397067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9334921_9337192_9337353_9359971_9360072_9396279
transcript_647.known	SIRV7	-	2498	5	FSM	SIRV7A	SIRV703	2498	5	0	0	0	0	multi-exon	FALSE	canonical	3	1263	junction_2	1949.6738188733	9753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	147918	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_2676_2993_3112_3809_3897_114680_114989_147608
transcript_64700.known	chr18	+	4379	10	FSM	ENSG00000017797.13	ENST00000383432.8	4379	10	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	32.1527987760911	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCTGACTTCTCTGTTTTG	9471307	True	NA	17	True	ATTAAA	-28	NA	9475512	9538114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9475692_9512990_9513290_9516844_9517304_9522159_9522510_9524593_9524756_9525719_9525852_9530833_9530942_9533334_9533457_9533702_9533827_9535670
transcript_64703.nic	chr18	+	778	3	ISM	ENSG00000017797.13	ENST00000019317.8	4368	10	-49	21008	-49	-52	5prime_fragment	FALSE	canonical	2	26	junction_1	256.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGCCAATTCAGGAGC	9474746	True	NA	31	True	AAGAAA	-3	NA	9474959	9517106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_9475177_9512990_9513290_9516844
transcript_64704.known	chr18	+	3676	3	FSM	ENSG00000017797.13	ENST00000609094.2	3676	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_1	51	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTATTTTTGTGTTTT	9475544	False	NA	NA	False	AATAAA	-17	NA	9475669	9520199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9475692_9512990_9513290_9516844
transcript_64706.known	chr18	+	836	3	FSM	ENSG00000017797.13	ENST00000458039.3	836	3	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	257.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGCTGCCAGCCGTTTTCCG	9476079	False	NA	NA	False	NA	NA	NA	9476126	9517221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9476287_9512990_9513290_9516844
transcript_64708.nic	chr18	+	367	2	ISM	ENSG00000017797.13	ENST00000609094.2	3676	3	-57	6921	-57	222	5prime_fragment	FALSE	canonical	3	437	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGAGGAGTAAGTGCC	9475455	False	NA	17	True	AAAAAG	-17	NA	9475612	9513278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_9475692_9512990
transcript_64709.known	chr18	-	3885	20	FSM	ENSG00000154845.16	ENST00000400555.7	3885	20	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_18	25.6150925040086	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTAGTTTCTCTGGAATCT	-9613406	True	NA	-15	True	ATTAAA	-22	NA	9614569	9546790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9614477
transcript_64711.known	chr18	-	578	6	FSM	ENSG00000154845.16	ENST00000582240.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	56.8879600618619	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGCTCTGTTGGAGCAGGA	NA	False	NA	NA	False	AAAACA	-16	NA	9615189	9588208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9588236_9588710_9588854_9593767_9593875_9595017_9595103_9614225_9614271_9615018
transcript_64713.known	chr18	-	481	3	FSM	ENSG00000154845.16	ENST00000577779.1	481	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	10.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATACCTGCTGTATGACGG	-9613350	True	NA	NA	False	TATAAA	-43	NA	9614513	9594702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9595103_9614225_9614271_9614477
transcript_64714.nic	chr18	-	383	3	ISM	ENSG00000154845.16	ENST00000582240.5	578	6	133	6594	133	22	5prime_fragment	FALSE	canonical	3	14	junction_2	47.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACCATTAATTACCATTGC	NA	False	NA	NA	False	NA	NA	NA	9615056	9594802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_9595103_9614225_9614271_9615018
transcript_64716.known	chr18	-	3923	20	FSM	ENSG00000154845.16	ENST00000400556.8	3923	20	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_18	31.2511938830115	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTAGTTTCTCTGGAA	-9613396	True	NA	-18	True	ATTAAA	-19	NA	9614559	9546793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_9547953_9549196_9549339_9550051_9550187_9550277_9550399_9553321_9553423_9557220_9557383_9559418_9559605_9561979_9562076_9563377_9563551_9570156_9570684_9577063_9577192_9583116_9583276_9584514_9584581_9584720_9584829_9588088_9588236_9588710_9588854_9593767_9593875_9595017_9595154_9614225_9614271_9614477
transcript_64718.known	chr18	+	3919	7	FSM	ENSG00000168461.13	ENST00000578921.6	3919	7	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_6	31.6842056692114	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTTTGTCTTTTTCTTATT	9706793	True	NA	18	True	AATAAA	-15	NA	9708300	9862551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_64721.nic	chr18	+	933	6	ISM	ENSG00000168461.13	ENST00000578921.6	3919	7	-59	16581	-33	278	5prime_fragment	FALSE	canonical	3	328	junction_5	10.7962956610126	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGCATTCTGTAGCATTT	9706734	True	NA	NA	False	AATAAA	-19	NA	9708241	9845970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_9708445_9775277_9775358_9792153_9792236_9814019_9814092_9815115_9815223_9845581
transcript_64724.known	chr18	+	783	6	FSM	ENSG00000168461.13	ENST00000578734.5	783	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	124.619420637395	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGGCAGGAAATGTACCTG	9706767	True	NA	NA	False	NA	NA	NA	9708274	9859469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9708445_9792153_9792236_9814019_9814092_9815115_9815223_9845581_9845692_9859227
transcript_64725.known	chr18	+	6801	6	FSM	ENSG00000101558.14	ENST00000400000.7	6801	6	0	0	0	0	multi-exon	FALSE	canonical	3	1350	junction_1	85.6434469180217	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTGGGTGCTTTTGTG	9891046	True	NA	NA	False	AATAAA	-14	NA	9914015	9960021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_9914336_9931809_9931963_9936109_9936214_9936985_9937067_9950394_9950569_9954052
transcript_64733.known	chr18	+	3559	12	FSM	ENSG00000134265.13	ENST00000322897.11	3559	12	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	18.1121392103986	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATAATTGTTCTTTGTATTA	10523397	True	NA	9	True	AATAAA	-18	NA	10526026	10552764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_64738.nic	chr18	+	752	9	ISM	ENSG00000134265.13	ENST00000322897.11	3559	12	-131	6400	-9	-4156	5prime_fragment	FALSE	canonical	3	223	junction_2	20.4048860570208	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTATAAGGAAATTGAGA	10525673	True	NA	NA	False	AAGAAA	-5	NA	10525895	10546364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328_10540400_10546325
transcript_64740.known	chr18	+	887	8	FSM	ENSG00000134265.13	ENST00000582978.5	887	8	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	19.3601737216021	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCTTGACAAATAGTGTCA	10523472	False	NA	NA	False	CATAAA	-24	NA	10526101	10540779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_10526159_10530769_10530838_10532710_10532796_10533535_10533554_10534465_10534497_10539761_10539872_10539987_10540055_10540328
transcript_64742.known	chr18	+	1516	8	FSM	ENSG00000134265.13	ENST00000580483.5	1516	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	82.6161520008562	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATTATGAGTTTGAAAAA	10525682	True	NA	4	True	AATAAA	-20	NA	10525904	10550801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_10526159_10539761_10539872_10539987_10540055_10540328_10540400_10546325_10546405_10548298_10548379_10548966_10549097_10550076
transcript_64746.known	chr18	+	1722	13	FSM	ENSG00000141404.17	ENST00000269162.9	1722	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	32.1674222709181	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCTCCCTTTATTGATTC	NA	False	NA	NA	False	NA	NA	NA	11751507	11881410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11751707_11752331_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_64747.known	chr18	+	6227	12	FSM	ENSG00000141404.17	ENST00000334049.11	6227	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.078815837558	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11688600	True	NA	28	True	AATAAA	-23	NA	11689263	11885685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11689940_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_64748.known	chr18	+	6045	12	FSM	ENSG00000141404.17	ENST00000423027.8	6045	12	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21.4618631588204	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGGGTTGTTTCTGTTCCT	11751996	True	NA	28	True	AATAAA	-23	NA	11752084	11885685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11752579_11752852_11752926_11753627_11753683_11753825_11753946_11824917_11825016_11862394_11862450_11864532_11864607_11867167_11867227_11868542_11868664_11872267_11872399_11876620_11876689_11880988
transcript_64756.known	chr18	+	3032	1	FSM	ENSG00000255112.3	ENST00000526991.3	3032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	461	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGGATGTGAGTGTG	11848858	True	NA	9	True	ATTAAA	-16	NA	11851412	11854444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11851400_11854400
transcript_64758.known	chr18	-	2427	12	FSM	ENSG00000154889.17	ENST00000496196.5	2427	12	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	21.0473688506946	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACAGATGTGATGTGCAGA	-11906740	True	NA	NA	False	AATATA	-16	NA	11908317	11883689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11884878_11885044_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_64762.known	chr18	-	3330	11	FSM	ENSG00000154889.17	ENST00000588072.6	3330	11	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_4	15.8496056733283	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCACCTCCCAGGTTCAAG	-11906740	True	NA	NA	False	NA	NA	NA	11908317	11882621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886712_11886779_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_64766.known	chr18	-	1831	10	FSM	ENSG00000154889.17	ENST00000344987.11	1831	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	23.4178364015209	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTGTTTCCCTCTTCCTGT	-11906753	True	NA	-22	True	AATAAA	-6	NA	11908330	11884067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886498_11886622_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_64774.known	chr18	-	2324	9	FSM	ENSG00000154889.17	ENST00000317235.11	2324	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	26.3142071892733	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTATTCTTTTTGTTTTTTT	-11906772	True	NA	-22	True	AATAAA	-29	NA	11908349	11883470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_64780.known	chr18	-	1568	9	FSM	ENSG00000154889.17	ENST00000589731.5	1568	9	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	24.8193472919817	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACATAATATATAAATATAAG	-11906738	True	NA	NA	False	ATTAAA	-44	NA	11908315	11886114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11886622_11886712_11886782_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11906202_11906310_11908200
transcript_64787.known	chr18	-	379	3	FSM	ENSG00000154889.17	ENST00000593001.5	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	9.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGCTGTTGTCTTTGCTGTG	-11906724	True	NA	NA	False	ATTAAA	-30	NA	11908301	11897185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11897357_11906202_11906310_11908200
transcript_64789.known	chr18	-	1636	8	FSM	ENSG00000154889.17	ENST00000309976.13	1636	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	33.4383380116236	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGAAGTGGTTCTCAAA	-11906773	True	NA	-7	True	AATAAA	-21	NA	11908350	11884052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_11884628_11885675_11885817_11886916_11887026_11888668_11888744_11889386_11889491_11893467_11893577_11896983_11897357_11908200
transcript_64794.nnic	chr18	-	1315	3	Antisense	novelGene_ENSG00000267661.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	2	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTCCTGAGTTCTGTGA	-11947667	True	NA	NA	False	AATAAA	-18	NA	11947778	11927374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_11928327_11946585_11946734_11947563
transcript_648.known	SIRV7	-	2462	5	FSM	SIRV7A	SIRV705	2462	5	0	0	0	0	multi-exon	FALSE	canonical	3	2237	junction_2	1447.67371582826	11354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAGTGTTAATATGAA	NA	False	NA	NA	False	TATAAA	-17	NA	147925	1005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_2676_2993_3112_43028_43078_114680_114989_147608
transcript_64800.nic	chr18	+	1439	8	NIC	ENSG00000141401.12	novel	923	8	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	284.169825625309	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	NA	False	NA	23	True	AATAAA	-14	NA	11980956	12030877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_11981206_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_64802.known	chr18	+	923	8	FSM	ENSG00000141401.12	ENST00000589238.5	923	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	285.888589688861	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGTGGCCCTCGTGGCCCAC	11980787	False	NA	NA	False	NA	NA	NA	11981036	12030516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11981131_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_64806.nnic	chr18	+	1298	8	NNC	ENSG00000141401.12	novel	1449	8	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	285.201039011188	204	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11981169	False	NA	23	True	AATAAA	-14	NA	11981418	12030877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_11981527_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_64808.known	chr18	+	1449	8	FSM	ENSG00000141401.12	ENST00000269159.8	1449	8	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_4	54.8020556742395	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11974226	True	NA	23	True	AATAAA	-14	NA	11981506	12030877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_11981766_11999053_11999188_12009882_12009988_12012169_12012216_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_64809.nic	chr18	+	1328	7	NIC	ENSG00000141401.12	novel	923	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	390.715902756295	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGTATCTGTTTCCT	11980772	True	NA	23	True	AATAAA	-14	NA	11981021	12030877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_11981206_11999053_11999188_12009882_12009988_12014264_12014374_12028042_12028152_12028841_12028994_12030342
transcript_64816.known	chr18	+	1008	5	FSM	ENSG00000176194.18	ENST00000320477.10	1008	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.433012701892219	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTGACACTTCCTGTG	12254326	True	NA	NA	False	AATAAA	-24	NA	12254360	12277595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12254422_12262824_12262970_12264306_12264454_12274092_12274275_12277122
transcript_64817.known	chr18	+	733	2	FSM	ENSG00000267069.2	ENST00000586226.2	884	2	45	106	45	-106	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCTATTTTCTTCTCAC	12288258	True	NA	NA	False	NA	NA	NA	12288307	12291488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12288655_12291102
transcript_64818.known	chr18	-	3160	17	FSM	ENSG00000141385.12	ENST00000269143.8	3160	17	0	0	0	0	multi-exon	TRUE	canonical	3	621	junction_15	63.1699097672302	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGGGTCCCTATTTATGC	-12363110	True	NA	-1	True	AATAAA	-29	NA	12377227	12328943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12329784_12337340_12337536_12340200_12340402_12344131_12344248_12348272_12348384_12351084_12351211_12351305_12351414_12353004_12353159_12356693_12356832_12358669_12358944_12359926_12360052_12363781_12363857_12366964_12367118_12367275_12367383_12370848_12370927_12371591_12371692_12376968
transcript_6482.nnic	chr1	+	647	4	NNC	ENSG00000125703.15	novel	2890	11	NA	NA	-26	-1144	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.378039640302	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGCATTCCTATTTC	62782033	True	NA	4	True	AATAAA	-14	NA	62784105	62864369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_62784226_62834823_62834853_62841427_62841548_62863991
transcript_64824.known	chr18	+	524	5	FSM	ENSG00000176014.13	ENST00000590693.5	524	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	459.135600884967	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTCCAGCTCACGCACT	12307637	False	NA	NA	False	NA	NA	NA	12307668	12325181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12307770_12308261_12308350_12308686_12308796_12310942_12311054_12325066
transcript_6483.nnic	chr1	+	1434	4	NNC	ENSG00000125703.15	novel	2890	11	NA	NA	-26	-357	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	109.378039640302	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTTGTTTTGGTTTTAA	62782033	True	NA	NA	False	AATAAA	-18	NA	62784105	62865156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_62784226_62834823_62834853_62841427_62841548_62863991
transcript_64832.known	chr18	+	788	4	FSM	ENSG00000176014.13	ENST00000586653.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	506.386106532248	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGACCGCATCATGAACACC	12289073	True	NA	NA	False	NA	NA	NA	12308240	12325267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12324808
transcript_64833.known	chr18	+	1879	4	FSM	ENSG00000176014.13	ENST00000317702.10	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	937	junction_3	80.6101730552664	1994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAATGGCTACTTGGGTCACT	12289073	True	NA	34	True	CATAAA	-26	NA	12308240	12326616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12325066
transcript_64834.known	chr18	+	1017	4	FSM	ENSG00000176014.13	ENST00000591909.5	1017	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_3	488.01388869125	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCTATTCAGAAATATTAAT	12289066	True	NA	22	True	ATTAAA	-18	NA	12308233	12329826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12310942_12311054_12329145
transcript_64838.known	chr18	+	408	3	FSM	ENSG00000176014.13	ENST00000587204.1	408	3	0	0	0	0	multi-exon	FALSE	canonical	3	1081	junction_2	22.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTCATAGAAAAAGTGTGA	12289076	True	NA	NA	False	TTTAAA	-35	NA	12308243	12311135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12310942
transcript_64841.known	chr18	+	1075	3	FSM	ENSG00000176014.13	ENST00000590103.5	1075	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	538	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCTGTTCAAGCGCATCTC	12289064	True	NA	NA	False	NA	NA	NA	12308231	12325914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12308686_12308796_12325066
transcript_64847.known	chr18	+	485	3	FSM	ENSG00000176014.13	ENST00000591463.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	467.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACCAGCTGGTGGAGAA	12289095	True	NA	NA	False	NA	NA	NA	12308262	12325353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12308350_12310942_12311054_12325066
transcript_64852.known	chr18	-	2895	12	FSM	ENSG00000101624.11	ENST00000262127.7	2895	12	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	13.2121907143015	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTGGTCAGAGGATT	-12700816	True	NA	NA	False	GATAAA	-26	NA	12702723	12672624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12673504_12674535_12674754_12678108_12678443_12680661_12680829_12686261_12686451_12691358_12691488_12695253_12695352_12697222_12697409_12698978_12699204_12699829_12699906_12700957_12701114_12702485
transcript_64874.known	chr18	-	897	4	FSM	ENSG00000101624.11	ENST00000586887.1	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	42.8200368467328	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCCTGGATATTATTTTTT	-12700870	True	NA	NA	False	TTTAAA	-42	NA	12702777	12698792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12699166_12699829_12699906_12700957_12701114_12702485
transcript_64879.known	chr18	+	377	3	FSM	ENSG00000128789.21	ENST00000585853.2	377	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGCCCAGGCTGGTCT	NA	False	NA	NA	False	NA	NA	NA	12658042	12663471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12658206_12658573_12658774_12663457
transcript_64884.known	chr18	+	471	2	FSM	ENSG00000128789.21	ENST00000400514.2	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGATTCATTTGTAACATT	12657912	True	NA	NA	False	TATAAA	-39	NA	12658192	12658893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12658344_12658573
transcript_64887.known	chr18	+	1070	7	FSM	ENSG00000128789.21	ENST00000317615.11	1070	7	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_5	20.0866179886566	8378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTCTTAAATGTATTTT	12692827	True	NA	18	True	AATAAA	-19	NA	12703041	12725740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498_12724620_12725438
transcript_64888.known	chr18	+	1036	6	FSM	ENSG00000128789.21	ENST00000590217.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	559	junction_5	22.0036360631601	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGTTAGATTAATTATGC	12692808	True	NA	NA	False	AAAAAG	-33	NA	12703022	12724868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12703165_12706549_12706722_12712701_12712761_12718516_12718636_12720509_12720684_12724498
transcript_64890.known	chr18	-	1273	1	FSM	ENSG00000260302.3	ENST00000563722.1	1273	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTATATATACATTTATATT	-12775900	False	NA	NA	False	AATAAA	-23	NA	12775923	12774650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12774600_12775900
transcript_64892.known	chr18	-	1648	11	FSM	ENSG00000175354.20	ENST00000591115.5	1648	11	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_6	153.652725325651	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTTTTGTTGGTTTGTGTG	-12881081	True	NA	-4	True	ATTAAA	-16	NA	12884214	12785480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12785845_12794383_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12819213_12819283_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_64893.known	chr18	-	3470	9	FSM	ENSG00000175354.20	ENST00000309660.10	3470	9	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	52.9362824535309	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCCTGTGTCCTGATTCA	-12881104	True	NA	-2	True	ATTAAA	-17	NA	12884237	12792151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_12794486_12801969_12802152_12814202_12814356_12817155_12817366_12825809_12825945_12830942_12831042_12836790_12836892_12859163_12859255_12884072
transcript_64899.known	chr18	+	3494	9	FSM	ENSG00000085415.16	ENST00000262124.15	3494	9	0	0	0	0	multi-exon	FALSE	canonical	3	750	junction_3	43.0985426087704	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGACTTTTTGGTCTTTT	12937468	True	NA	21	True	AATAAA	-32	NA	12947994	12987536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_64900.known	chr18	+	1851	9	FSM	ENSG00000085415.16	ENST00000399892.7	1851	9	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_8	264.931565456063	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAATGTGGACTTTTTGGT	12937484	True	NA	16	True	AATAAA	-27	NA	12948010	12987531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12948233_12951854_12951906_12955462_12955610_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12986861
transcript_64905.nic	chr18	+	1536	8	NIC	ENSG00000085415.16	novel	3494	9	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_2	264.287104243449	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTTTTGAGTGCTGATTT	12937461	True	NA	NA	False	AATAAA	-15	NA	12947987	12985718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_12948233_12951854_12951906_12963159_12963372_12971152_12971252_12978751_12978893_12982517_12982676_12984039_12984191_12985239
transcript_64908.known	chr18	+	787	4	FSM	ENSG00000085415.16	ENST00000592170.5	787	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	398.852799357803	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGACATTTATTAGTATTC	12947070	True	NA	NA	False	GATAAA	-23	NA	12947132	12955610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_12947627_12948138_12948233_12951854_12951906_12955462
transcript_64909.known	chr18	+	6236	12	FSM	ENSG00000101654.18	ENST00000383314.7	6236	12	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	27.2509003566476	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721506	True	NA	13	True	AATAAA	-20	NA	13726672	13764556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_64911.known	chr18	+	4108	12	FSM	ENSG00000101654.18	ENST00000592764.5	4108	12	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	34.9729529496228	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCTGTTTGGTTCATTTAC	13721537	True	NA	13	True	AATAAA	-20	NA	13726703	13764556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13762038
transcript_64913.known	chr18	+	1849	11	FSM	ENSG00000101654.18	ENST00000543302.6	1849	11	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	15.7480157480236	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTCCACAGTGTTCAGA	13721493	True	NA	8	True	CATAAA	-31	NA	13726659	13760285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009_13737136_13740166_13740280_13741509_13741692_13742487_13742653_13746219_13746338_13752325_13752428_13754113_13754148_13759941
transcript_64919.nic	chr18	+	911	5	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-32	27449	-19	5286	5prime_fragment	FALSE	canonical	3	48	junction_1	32.3911639185751	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	13721474	True	NA	NA	False	NA	NA	NA	13726640	13737107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13730626_13730756_13731475_13731935_13734463_13734600_13737009
transcript_64922.nic	chr18	+	771	4	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-8	23178	-8	5286	5prime_fragment	FALSE	canonical	3	89	junction_1	18.8030730348939	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAGAATTAACAAGCTAGT	13721485	True	NA	NA	False	NA	NA	NA	13726651	13737107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13731475_13731935_13734463_13734600_13737009
transcript_64924.known	chr18	-	1091	4	FSM	ENSG00000177150.13	ENST00000592976.5	1091	4	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_2	5.31245915016974	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGTGGAATAAGGTGCC	-13723181	True	NA	70	True	AAAAAG	-13	NA	13726586	13666493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_13666714_13671861_13671974_13681604_13682106_13726328
transcript_64930.nic	chr18	+	440	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-32	32859	-19	-124	5prime_fragment	FALSE	canonical	3	48	junction_1	17	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGAAGATGATCTTGT	13721474	True	NA	NA	False	AAGAAA	-8	NA	13726640	13731697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_64931.nic	chr18	+	564	3	ISM	ENSG00000101654.18	ENST00000383314.7	6236	12	-32	32735	-19	0	5prime_fragment	FALSE	canonical	3	48	junction_1	17	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	13721474	True	NA	NA	False	AAAAAG	-25	NA	13726640	13731821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13730626_13730756_13731475
transcript_64934.known	chr18	-	1389	3	FSM	ENSG00000177150.13	ENST00000588475.1	1389	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	84	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTAGTCTTTCTATAAAA	-13723100	True	NA	NA	False	NA	NA	NA	13726505	13666002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_13666714_13681604_13682106_13726328
transcript_64936.known	chr18	-	1095	2	FSM	ENSG00000177150.13	ENST00000585785.1	1095	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATGAAAAATGGACCCTTTA	-13723187	True	NA	-90	True	AATAAA	-43	NA	13726592	13665882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_13666714_13726328
transcript_64937.nic	chr18	+	492	2	ISM	ENSG00000101654.18	ENST00000543302.6	1849	11	-61	28449	-61	15	5prime_fragment	FALSE	canonical	3	89	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAAACTGAGGATGTTCCA	NA	False	NA	NA	False	AAAAAG	-40	NA	13726598	13731836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_13726730_13731475
transcript_64939.known	chr18	+	572	3	FSM	ENSG00000101654.18	ENST00000591746.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	41	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CAAAGAAAAGAAAAAGAGAA	13721602	True	NA	NA	False	AAAAAG	-25	NA	13726768	13731821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_13726866_13730626_13730756_13731475
transcript_64945.known	chr18	-	6760	3	FSM	ENSG00000175322.12	ENST00000590202.3	6760	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131066	True	NA	-13	True	AATAAA	-26	NA	14132435	14099937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14106410_14124349_14124477_14132274
transcript_64946.known	chr18	-	2117	3	FSM	ENSG00000175322.12	ENST00000589498.5	2117	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGCAAGGATTTTCTTC	-14131059	True	NA	-13	True	AATAAA	-26	NA	14132428	14099937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14101774_14124349_14124477_14132274
transcript_64950.known	chr18	-	661	3	FSM	ENSG00000175322.12	ENST00000587512.5	661	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGATATATCTATAT	-14131060	True	NA	NA	False	NA	NA	NA	14132429	14121792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14122172_14124349_14124477_14132274
transcript_64951.known	chr18	-	599	2	FSM	ENSG00000175322.12	ENST00000588435.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTAATGAATGTGAAAAAGT	-14131088	True	NA	NA	False	AGTAAA	-37	NA	14132457	14105993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14106410_14132274
transcript_64955.known	chr18	-	589	2	FSM	ENSG00000175322.12	ENST00000591987.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCACCACCACGTCTGGCT	-14131063	True	NA	NA	False	NA	NA	NA	14132432	14124045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14124477_14132274
transcript_64957.known	chr18	-	2114	5	FSM	ENSG00000175322.12	ENST00000587419.5	2114	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	14.9227175809234	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATCATTGTAAATGTTCT	-14131060	True	NA	NA	False	AATAAA	-14	NA	14132429	14075993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_14077527_14078199_14078299_14084876_14085077_14124349_14124477_14132274
transcript_64960.known	chr18	-	4488	12	FSM	ENSG00000141446.11	ENST00000269214.10	4488	12	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_3	28.0592643176828	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATAATGGTGTGTTGTCAT	-21595721	True	NA	14	True	AATAAA	-42	NA	21600704	21529283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_64967.nic	chr18	-	1292	4	ISM	ENSG00000141446.11	ENST00000383276.1	4773	13	97	45238	-83	18502	5prime_fragment	FALSE	canonical	3	193	junction_1	26.2847653382884	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATCTCAGAAAAAATTAGT	-21600722	False	NA	NA	False	AAAAAG	-4	NA	21600787	21574540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_21575431_21575671_21575778_21584309_21584441_21600622
transcript_6497.known	chr1	-	941	4	FSM	ENSG00000230798.6	ENST00000418244.6	1006	4	65	0	17	0	multi-exon	FALSE	canonical	0	0	junction_1	379.945025263159	2909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319573	True	NA	-43	True	AATAAA	-24	NA	63322436	63320883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63321664_63322081_63322315
transcript_64972.known	chr18	-	4773	13	FSM	ENSG00000141446.11	ENST00000383276.1	4773	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	80.8614641772512	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAATGTACTAACTGAG	-21600819	False	NA	-5	True	AATAAA	-32	NA	21600884	21529302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21530491_21532472_21532661_21536041_21536186_21539919_21540010_21540576_21540701_21560858_21560991_21564202_21564318_21566145_21566207_21567979_21568095_21573313_21575431_21575671_21575778_21584309_21584441_21600622
transcript_64977.known	chr18	+	723	3	FSM	ENSG00000167088.11	ENST00000582475.1	723	3	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_1	2695	1963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCATAATAGGCTCAGAGGCT	21554413	True	NA	NA	False	NA	NA	NA	21612330	21629479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21612444_21623747_21623940_21629061
transcript_64980.known	chr18	+	4858	4	FSM	ENSG00000167088.11	ENST00000300413.10	4858	4	0	0	0	0	multi-exon	FALSE	canonical	3	5573	junction_3	265.557275680157	19967	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCGTTTTTTTTTCTTTT	21554396	True	NA	17	True	AATAAA	-14	NA	21612313	21633520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21612444_21622724_21622802_21623747_21623940_21629061
transcript_64981.known	chr18	+	320	4	FSM	ENSG00000167088.11	ENST00000579618.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	3	533	junction_2	2533.03314010869	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGAGGAAGAGGGGGTCCT	21554396	True	NA	43	True	NA	NA	NA	21612313	21629109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_21612444_21622724_21622802_21623874_21623940_21629061
transcript_64982.known	chr18	-	2029	9	FSM	ENSG00000158201.10	ENST00000289119.7	2029	9	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	24.8646335183127	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTCCTTTGTGAGTTTTT	-21703221	True	NA	-6	True	AATAAA	-16	NA	21704774	21650900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21664117_21664231_21683919_21683966_21702315_21702499_21703583_21703748_21704503
transcript_64983.known	chr18	-	1836	7	FSM	ENSG00000158201.10	ENST00000580981.5	1836	7	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_4	33.0928827527746	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATTAAAATAAATTCTACCA	-21703214	True	NA	-33	True	TTTAAA	-31	NA	21704767	21650927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_21651764_21656860_21657027_21657103_21657153_21659169_21659344_21702315_21702499_21703583_21703748_21704503
transcript_64985.nnic	chr18	+	645	3	NNC	ENSG00000101752.12	novel	3306	21	NA	NA	-41	-111728	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTGGGCATTATAACAAAAT	21704824	True	NA	NA	False	AATAAA	-14	NA	21704915	21707830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_21705124_21706126_21706225_21707491
transcript_64986.nnic	chr18	+	414	2	NNC	ENSG00000101752.12	novel	3306	21	NA	NA	-41	-113491	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGTTCTGTTTTGTTTTG	21704824	True	NA	NA	False	AATAAA	-22	NA	21704915	21706067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_21705124_21705861
transcript_64987.nnic	chr18	+	566	2	NNC	ENSG00000101752.12	novel	3306	21	NA	NA	-41	-111709	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCATAGCCTAGGTGACTT	21704824	True	NA	NA	False	AATAAA	-33	NA	21704915	21707849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_21705124_21707491
transcript_64991.nnic	chr18	-	610	3	NIC	ENSG00000266850.1	novel	413	3	NA	NA	-26107	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	2	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGGCATTCTGGTTTTTA	-22933680	True	NA	NA	False	AATAAA	-17	NA	22933828	22723490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_22723750_22920761_22920872_22933587
transcript_64995.known	chr18	+	3275	19	FSM	ENSG00000101773.19	ENST00000327155.10	3275	19	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_8	26.6149962369217	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930385	True	NA	15	True	AATACA	-16	NA	22933327	23026486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_64996.known	chr18	+	3293	19	FSM	ENSG00000101773.19	ENST00000399722.6	3293	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	46.7478130471507	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	22930883	False	NA	17	True	AATACA	-18	NA	22933825	23026488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22934079_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23016827_23016925_23022128_23022271_23026142
transcript_65.known	ERCC-00136	+	1025	1	FSM	ERCC-00136A	EF011063	1025	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4906	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00136_+_0_1000
transcript_65018.nic	chr18	+	1434	4	ISM	ENSG00000101773.19	ENST00000327155.10	3275	19	21	75901	21	550	5prime_fragment	FALSE	canonical	3	181	junction_3	14.290634073484	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATACAAACCCACGATATCC	22930406	True	NA	NA	False	NA	NA	NA	22933348	22950585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_22933565_22936753_22936961_22946443_22946487_22949617
transcript_65021.known	chr18	+	617	3	FSM	ENSG00000101773.19	ENST00000581687.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	23	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTCTGTGATTTGTT	NA	False	NA	17	True	AATACA	-18	NA	23016795	23026488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23016925_23022128_23022271_23026142
transcript_65022.known	chr18	+	3260	18	FSM	ENSG00000101773.19	ENST00000399725.6	3260	18	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_16	66.3991808012167	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTTGTAGTCTGTGATTTG	22930898	False	NA	15	True	AATACA	-16	NA	22933840	23026486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_22934160_22936753_22936961_22946443_22946487_22949617_22949714_22968805_22968919_22975152_22975220_22982217_22982394_22984885_22984991_22989220_22989319_22990936_22991050_22992747_22993640_22993720_22993848_22996373_22996463_22997619_22997735_23001585_23001730_23006362_23006433_23022128_23022271_23026142
transcript_65036.known	chr18	+	3574	13	FSM	ENSG00000101782.15	ENST00000339486.8	3574	13	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_5	10.2479672781159	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTGTGTGGTATCTTC	23451959	True	NA	19	True	ATTAAA	-21	NA	23453286	23483140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479316_23479425_23481171
transcript_65040.known	chr18	+	3049	12	FSM	ENSG00000101782.15	ENST00000581302.5	3049	12	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_5	10.6383059609605	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAATTTGGATACCAAATT	23451964	True	NA	NA	False	NA	NA	NA	23453291	23482528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477269_23479316_23479425_23481171
transcript_65045.known	chr18	+	1904	13	FSM	ENSG00000101782.15	ENST00000577501.5	1904	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	34.0657044873906	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTAACAGCTATAGGTT	23451980	True	NA	25	True	AATAAA	-39	NA	23453307	23481500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23453503_23462963_23463080_23463966_23464113_23464205_23464314_23464518_23464629_23466132_23466277_23467398_23467527_23473428_23473627_23474947_23475108_23477005_23477087_23477178_23477269_23479325_23479425_23481171
transcript_65046.known	chr18	+	2200	20	FSM	ENSG00000141452.10	ENST00000269221.8	2200	20	0	0	0	0	multi-exon	FALSE	non_canonical	3	80	junction_18	14.1646432751966	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTATAGAACTTGTGGG	23502114	True	NA	NA	False	TATAAA	-42	NA	23503510	23531822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23503721_23504370_23504448_23506969_23507055_23507984_23508042_23509192_23509280_23515855_23515997_23516319_23516424_23518889_23518980_23519068_23519175_23520201_23520314_23524129_23524175_23524428_23524483_23526636_23526766_23527794_23527902_23529178_23529299_23529634_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_65048.known	chr18	-	4760	25	FSM	ENSG00000141458.13	ENST00000269228.10	4760	25	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_14	13.254912611305	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATCTAACCTGTCCTTA	-23583986	True	NA	54	True	AATACA	-19	NA	23586506	23531441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_23532285_23533354_23533518_23534445_23534560_23535468_23535701_23536672_23536877_23538541_23538672_23539354_23539471_23539810_23540002_23540447_23540538_23541067_23541209_23541305_23541434_23543454_23543570_23544343_23544527_23544959_23545150_23548005_23548109_23551626_23551728_23554757_23554985_23556242_23556614_23557116_23557191_23560230_23560481_23561359_23561528_23568822_23568999_23572073_23572181_23573451_23573575_23586286
transcript_65049.known	chr18	+	675	5	FSM	ENSG00000141452.10	ENST00000593081.5	675	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_3	22.477766792989	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTATAAAGTGTATCTACA	NA	False	NA	NA	False	AATAAA	-19	NA	23529595	23531782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_23529713_23530027_23530133_23530228_23530298_23530386_23530613_23531624
transcript_65051.known	chr18	-	846	2	FSM	ENSG00000154065.17	ENST00000585908.2	846	2	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	0	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTGTTTTCCTGAAAACA	-23662281	True	NA	-21	True	AATAAA	-15	NA	23662772	23648410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_23649194_23662709
transcript_65053.nic	chr18	+	1296	5	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	51200	0	-432	0	3prime_fragment	FALSE	canonical	0	0	junction_1	2.8613807855649	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAATATGAAACTTT	NA	False	NA	NA	False	ATTAAA	-15	NA	23949460	23954989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_23949925_23950028_23950160_23951683_23951778_23952989_23953110_23954502
transcript_65055.nnic	chr18	+	800	4	NNC	ENSG00000053747.17	novel	4921	32	NA	NA	242	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.2659863237109	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAATATGAAACTTT	23950073	True	NA	NA	False	ATTAAA	-15	NA	23950134	23954989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_23950234_23951683_23951778_23952989_23953110_23954502
transcript_65057.nic	chr18	+	959	3	ISM	ENSG00000053747.17	ENST00000588770.5	4921	32	53165	0	1533	0	3prime_fragment	FALSE	canonical	2	4	junction_2	2	48	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAAGAATATGAAACTTT	23951414	False	NA	NA	False	ATTAAA	-15	NA	23951425	23954989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_23951778_23952989_23953110_23954502
transcript_65060.known	chr18	+	4896	14	FSM	ENSG00000168234.13	ENST00000317571.8	4896	14	0	0	0	0	multi-exon	TRUE	canonical	3	55	junction_10	8.29842788276453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCATCTATGTGTGCTTC	24012794	True	NA	10	True	AAGAAA	-22	NA	24014753	24135600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24015039_24064139_24064189_24066011_24066141_24069156_24069272_24080584_24080940_24082912_24083082_24114553_24114648_24118124_24118233_24123833_24123944_24125426_24125551_24128885_24128984_24130312_24130418_24131881_24131921_24132484
transcript_65062.known	chr18	+	1048	2	FSM	ENSG00000168234.13	ENST00000584250.1	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTTGAGATTCCTTTT	24013765	False	NA	7	True	ATTAAA	-18	NA	24014419	24020288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24015039_24019859
transcript_65064.known	chr18	-	4152	28	FSM	ENSG00000141447.19	ENST00000319481.8	4152	28	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_19	98.4212134337526	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAAAGTGTGGTTTCTTT	-24392538	True	NA	-8	True	AATAAA	-16	NA	24397824	24162051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24280841_24280949_24303636_24303719_24311983_24312107_24314248_24314348_24317148_24317213_24317326_24317401_24318600_24318646_24318747_24318810_24332941_24333087_24334244_24334331_24341546_24341659_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65073.known	chr18	-	3317	14	FSM	ENSG00000141447.19	ENST00000399443.7	3317	14	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_13	48.857115668849	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGGTTTCTTTTAAAATT	NA	False	NA	-1	True	AATAAA	-23	NA	24272232	24162044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24163282_24165064_24165156_24166578_24166703_24167328_24167446_24170326_24170454_24171408_24171499_24172375_24172484_24178012_24178196_24179737_24179836_24181144_24181280_24196124_24196201_24225041_24225199_24239219_24239383_24271621
transcript_65081.nnic	chr18	-	686	6	NNC	ENSG00000141447.19	novel	588	5	NA	NA	-52	495	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	101.804911472875	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTGGTATTTCTG	-24397904	False	NA	NA	False	AATAAA	-22	NA	24397932	24347162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_24347252_24347803_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65094.known	chr18	-	588	5	FSM	ENSG00000141447.19	ENST00000582350.5	588	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	86.3752713454493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTATATTGGCCAGACTG	-24392498	True	NA	NA	False	NA	NA	NA	24397784	24347664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24347839_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65098.known	chr18	-	1887	5	FSM	ENSG00000141447.19	ENST00000399441.4	1887	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	94.1524694312369	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	-24392502	True	NA	-13	True	AATAAA	-15	NA	24397788	24357124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397572
transcript_65099.nic	chr18	-	1949	5	NIC	ENSG00000141447.19	novel	1887	5	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	79.9202727723073	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTGTCTCATCATTTTTC	-24397904	False	NA	-13	True	AATAAA	-15	NA	24397932	24357124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_24358512_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65106.nnic	chr18	-	993	5	NNC	ENSG00000141447.19	novel	1002	5	NA	NA	-52	-3355	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	93.6976520516923	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAATTGTGCAAAGAGTTT	-24397904	False	NA	-3	True	ATTAAA	-36	NA	24397932	24360479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_24360911_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65108.nnic	chr18	-	817	5	NNC	ENSG00000141447.19	novel	1002	5	NA	NA	-52	-3368	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	91.1125677390337	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAAGCATGACTGAATT	-24397904	False	NA	-16	True	ATTAAA	-23	NA	24397932	24360492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_24360748_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65112.nnic	chr18	-	1597	5	NNC	ENSG00000141447.19	novel	1002	5	NA	NA	-52	4078	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	86.8058177773817	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGACTTTGTGGGGTTT	-24397904	False	NA	-1	True	AATAAA	-26	NA	24397932	24362326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_24363362_24366891_24366967_24368286_24368373_24377412_24377536_24397654
transcript_65114.known	chr18	-	1002	5	FSM	ENSG00000141447.19	ENST00000582618.1	1002	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	101.696546155708	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAACCTCCAGGGAGGGTAG	-24392555	True	NA	NA	False	NA	NA	NA	24397841	24366404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24366967_24368286_24368373_24368545_24368590_24377412_24377536_24397654
transcript_65123.nic	chr18	-	1308	4	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-148	18481	-52	259	5prime_fragment	FALSE	canonical	3	203	junction_1	10.6562449087639	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGAGTTTTGTGGGCTG	-24397904	False	NA	-6	True	AATAAA	-15	NA	24397932	24366145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_24366967_24368286_24368373_24377412_24377536_24397654
transcript_6513.known	chr1	-	496	3	FSM	ENSG00000230798.6	ENST00000431294.6	678	3	176	6	176	0	multi-exon	FALSE	canonical	0	0	junction_1	31	7845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63323567	False	NA	-43	True	AATAAA	-24	NA	63323582	63320883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63323490
transcript_65133.nic	chr18	-	840	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-148	20269	-52	0	5prime_fragment	FALSE	canonical	3	214	junction_1	7.5	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAACAATGTCACA	-24397904	False	NA	NA	False	AATAAA	-7	NA	24397932	24367933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_65135.nic	chr18	-	744	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-148	20365	-52	-96	5prime_fragment	FALSE	canonical	3	214	junction_1	7.5	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTTTCAGTTCTGA	-24397904	False	NA	NA	False	AATAAA	-19	NA	24397932	24368029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_65138.nic	chr18	-	668	3	ISM	ENSG00000141447.19	ENST00000582350.5	588	5	-148	20441	-52	-172	5prime_fragment	FALSE	canonical	3	214	junction_1	7.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAATTGTATGTTTAATC	-24397904	False	NA	NA	False	AATAAA	-27	NA	24397932	24368105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_24368373_24377412_24377536_24397654
transcript_65139.known	chr18	-	565	2	FSM	ENSG00000141447.19	ENST00000581343.1	565	2	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAACAATGTCACA	NA	False	NA	NA	False	AATAAA	-7	NA	24377538	24367933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24368373_24377412
transcript_65144.known	chr18	+	1305	6	FSM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	13.4669966956259	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137516	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471_24160070_24161515
transcript_65145.known	chr18	+	824	6	FSM	ENSG00000154040.21	ENST00000415309.6	824	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	20.4939015319192	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAATTTTGTATTGCTTTTT	24137522	True	NA	25	True	AATAAA	-15	NA	24139067	24161599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159945_24160070_24161515
transcript_65147.known	chr18	+	2226	6	FSM	ENSG00000154040.21	ENST00000621648.4	2226	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	9.79795897113271	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137549	True	NA	23	True	AATAAA	-13	NA	24139094	24161597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24159471_24160070_24161515
transcript_65151.nic	chr18	+	1422	5	ISM	ENSG00000154040.21	ENST00000399496.8	1305	6	0	1329	0	6	5prime_fragment	FALSE	canonical	3	22	junction_4	14.9059551857638	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACTCATGCCAAGGATTTG	24137516	True	NA	NA	False	AATAAA	-27	NA	24139061	24160271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24156043_24159471
transcript_65154.known	chr18	+	1664	5	FSM	ENSG00000154040.21	ENST00000486759.6	1664	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	23.7644692766323	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATTTTGTATTGCTTTTTT	24137516	True	NA	26	True	AATAAA	-16	NA	24139061	24161600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24143090_24143260_24143359_24143414_24155700_24157000_24161515
transcript_65158.known	chr18	+	1109	4	FSM	ENSG00000154040.21	ENST00000327201.10	1109	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	15.5205956357638	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATACAATTTTGTATTGCTTT	24137486	True	NA	23	True	AATAAA	-13	NA	24139031	24161597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24155700_24156043_24159471_24160070_24161515
transcript_65160.known	chr18	+	1622	3	FSM	ENSG00000154040.21	ENST00000627314.1	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	14.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTTATGTGATGGGCGA	24137441	True	NA	NA	False	NA	NA	NA	24138986	24159662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24139119_24155700_24157000_24159471
transcript_65161.known	chr18	-	735	3	FSM	ENSG00000265750.1	ENST00000583267.1	735	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGGTGGTGGTTGTCCTCG	-24162199	False	NA	-6	True	AATAAA	-18	NA	24162211	24159508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_24159829_24160777_24160878_24161896
transcript_65168.known	chr18	+	3203	12	FSM	ENSG00000154059.11	ENST00000648078.1	3203	12	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	78.7412332782629	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATATTCTTCTATGGCTTAA	24426620	False	NA	-12	True	NA	NA	NA	24426633	24453510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778_24450815_24451360
transcript_6517.known	chr1	-	491	3	FSM	ENSG00000230798.6	ENST00000427268.1	491	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	145	7537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63324426	False	NA	-43	True	AATAAA	-24	NA	63324441	63320883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63324354
transcript_65174.known	chr18	+	3734	11	FSM	ENSG00000154059.11	ENST00000284202.9	3734	11	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_1	14.7461859475595	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTTATGACTGCATTGTA	24422412	True	NA	9	True	AATAAA	-20	NA	24426669	24453531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_24426793_24427918_24428048_24428868_24428922_24430321_24430385_24437954_24438041_24440495_24440619_24443048_24443153_24445392_24445467_24448092_24448184_24449818_24449954_24450778
transcript_65182.nic	chr18	-	655	2	ISM	ENSG00000198795.11	ENST00000579111.5	594	5	-27	122899	-27	-28369	5prime_fragment	FALSE	canonical	3	20	junction_1	0	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCTTCTTTTTTCCTT	NA	False	NA	-1	True	AATAAA	-14	NA	25352217	25350505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_25350948_25352004
transcript_65190.known	chr18	-	3402	11	FSM	ENSG00000141380.14	ENST00000415083.7	3402	11	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_3	224.36187287505	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	-26082077	True	NA	-26	True	AATAAA	-17	NA	26090613	26016252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_65191.known	chr18	-	2321	11	FSM	ENSG00000141380.14	ENST00000542420.6	2321	11	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	270.512476606903	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACTTTACAAACCTTTG	-26090364	True	NA	-15	True	ATTAAA	-13	NA	26091217	26017342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26035830_26035924_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_65192.known	chr18	-	1840	11	FSM	ENSG00000141380.14	ENST00000579640.5	1840	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	246.225201797054	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACAGCATCAGAAATCCTC	-26082074	True	NA	58	True	NA	NA	NA	26090610	26017884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26082362_26082529_26087500_26087578_26090500
transcript_65199.known	chr18	-	1545	11	FSM	ENSG00000141380.14	ENST00000585121.5	1545	11	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_9	253.982381278702	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATGCAATGACATAACCA	-26082061	True	NA	NA	False	NA	NA	NA	26090597	26018119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26080304_26080424_26087500_26087578_26090500
transcript_65203.known	chr18	-	1836	10	FSM	ENSG00000141380.14	ENST00000269137.11	1836	10	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_3	59.1466058844827	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTTAATACTTTTCCAC	-26090048	False	NA	-71	True	NA	NA	NA	26090901	26018013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26090500
transcript_65205.nic	chr18	-	3325	10	NIC	ENSG00000141380.14	novel	3402	11	NA	NA	-7	0	combination_of_known_junctions	TRUE	canonical	2	16	junction_9	202.505113485201	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCATTTGTTTCTTTA	NA	False	NA	-26	True	AATAAA	-17	NA	26091224	26016252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_26018381_26032398_26032533_26035004_26035128_26038554_26038660_26039288_26039457_26052623_26052846_26057588_26057743_26078075_26078161_26087500_26087578_26091095
transcript_65213.nic	chr18	-	506	4	ISM	ENSG00000141380.14	ENST00000585241.5	774	7	-4	28933	-4	-83	5prime_fragment	FALSE	canonical	2	9	junction_1	294.319554226354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCTTGCTGTTTTCTACAC	-26082093	True	NA	NA	False	AATAAA	-17	NA	26090629	26068342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_26068558_26078075_26078161_26087500_26087578_26090500
transcript_65215.known	chr18	+	1794	7	FSM	ENSG00000154611.15	ENST00000415576.7	1794	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.372677996249965	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTGTTTTAATTAAT	NA	False	NA	NA	False	AATAAA	-16	NA	26133868	26193355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_26134068_26144558_26144686_26151857_26151983_26158121_26158245_26178829_26178950_26179067_26179131_26192318
transcript_65217.known	chr18	-	814	5	FSM	ENSG00000134504.14	ENST00000580191.5	814	5	0	0	0	0	multi-exon	TRUE	canonical	2	17	junction_4	8.55862138431185	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCCTCTGGACTAAATG	-26657224	True	NA	NA	False	GATAAA	-3	NA	26657401	26455759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26455902_26459619_26459926_26476514_26476660_26501071_26501251_26657359
transcript_65224.nnic	chr18	+	463	2	NNC	ENSG00000260372.7	novel	2177	4	NA	NA	255483	-1772	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACTTTTAGAAAGCTTCCT	27184497	True	NA	NA	False	AATAAA	-23	NA	27184548	27188926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_27184828_27188742
transcript_65231.known	chr18	-	11379	6	FSM	ENSG00000154080.14	ENST00000618847.5	11379	6	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	70.4573629935154	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATAGCCTGTGCATATTTC	-27181056	True	NA	-5	True	AATAAA	-23	NA	27185308	26906480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26917351_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_65239.nnic	chr18	-	802	6	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	-45	-19853	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	114.304155654989	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGATAATGCAATTAGGCC	-27181101	True	NA	NA	False	ATTAAA	-20	NA	27185353	26935631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_26935880_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_6524.known	chr1	-	470	2	FSM	ENSG00000230798.6	ENST00000686639.1	1414	2	939	5	106	0	multi-exon	FALSE	canonical	0	0	junction_1	0	33865	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63321514	False	NA	-43	True	AATAAA	-24	NA	63321529	63320883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366
transcript_65240.nnic	chr18	-	749	6	NNC	ENSG00000154080.14	novel	11379	6	NA	NA	-45	-19906	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	114.304155654989	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGTATATGCCTTGCT	-27181101	True	NA	NA	False	AATAAA	-21	NA	27185353	26935684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_26935880_26944328_26944367_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_65242.known	chr18	-	2033	5	FSM	ENSG00000154080.14	ENST00000580774.2	2033	5	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	103.572438418722	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTGGACTTAGGCA	-27181046	True	NA	-6	True	GATAAA	-13	NA	27185298	26915778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_26917351_27024115_27024158_27048464_27048504_27142688_27142906_27185135
transcript_6525.known	chr1	-	547	3	FSM	ENSG00000230798.6	ENST00000690549.1	571	3	18	6	0	0	multi-exon	FALSE	canonical	0	0	junction_1	277	9170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAACTTGCTTCATTACA	-63319595	True	NA	-43	True	AATAAA	-24	NA	63322458	63320883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63321191_63321366_63321464_63322315
transcript_65255.nnic	chr18	+	859	4	NNC	ENSG00000286426.1	novel	812	4	NA	NA	-42571	9453	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.35702260395516	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTTCTGCCTGGATTAAGC	27743161	True	NA	NA	False	AATAAA	-35	NA	27743249	27805090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_27743493_27789271_27789514_27791194_27791263_27804784
transcript_65256.nnic	chr18	+	886	4	NNC	ENSG00000286426.1	novel	812	4	NA	NA	-42571	9445	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	2.05480466765633	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTAAGACTTCTGCCTG	27743161	True	NA	NA	False	AATAAA	-27	NA	27743249	27805082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_27743493_27789271_27789514_27802920_27803024_27804784
transcript_65257.known	chr18	-	4016	16	FSM	ENSG00000170558.10	ENST00000269141.8	4016	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_11	10.1893190264228	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGTTTGAACTTTTTC	-28176192	True	NA	-3	True	AATAAA	-20	NA	28177130	27950965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_27952360_27963356_27963522_27982943_27983084_27984999_27985234_27985527_27985762_27988523_27988667_27990096_27990351_27992654_27992841_27993499_27993638_28002996_28003170_28005848_28005994_28009716_28009873_28011845_28011993_28013682_28013910_28147672_28147785_28176962
transcript_65260.nnic	chr18	-	599	3	NNC	ENSG00000134755.18	novel	12331	16	NA	NA	858	-26132	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	103	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	-31101546	False	NA	NA	False	AAGAAA	-10	NA	31101563	31092129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_31092301_31093558_31093644_31101220
transcript_65262.nic	chr18	-	403	3	ISM	ENSG00000134755.18	ENST00000251081.8	12377	17	372	33290	372	-26132	5prime_fragment	FALSE	canonical	3	197	junction_2	4.5	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	-31102032	False	NA	NA	False	AAGAAA	-10	NA	31102049	31092129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_31092301_31093558_31093644_31101902
transcript_65263.nnic	chr18	-	395	3	NNC	ENSG00000134755.18	novel	12331	16	NA	NA	-18	-26132	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	102	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGTCTTTTTGGAGCAT	-31100033	True	NA	NA	False	AAGAAA	-10	NA	31102439	31092129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_31092301_31093558_31093644_31102300
transcript_65264.known	chr18	+	5697	15	FSM	ENSG00000046604.14	ENST00000261590.13	5697	15	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_7	48.3121229557323	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGGGGTACTTGGCAT	31494909	True	NA	27	True	AATAAA	-29	NA	31498176	31549008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31524447_31524586_31524702_31524889_31530986_31531253_31535269_31535413_31536201_31536430_31538750_31538979_31541192_31541315_31542519_31542853_31545720
transcript_65267.known	chr18	+	948	7	FSM	ENSG00000046604.14	ENST00000683654.1	948	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	221.209365383415	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCATGTGTTTCTTT	31494976	False	NA	NA	False	AATAAA	-17	NA	31498243	31522608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_31498297_31518238_31518275_31519802_31519938_31520802_31520965_31521098_31521244_31522082_31522250_31522358
transcript_65268.known	chr18	-	4672	9	FSM	ENSG00000118276.12	ENST00000306851.10	4672	9	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	19.0312243431683	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTGTGAAGATGTAATT	-31684558	False	240	-16	True	AATATA	-13	NA	31684581	31622245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_31625762_31626282_31626385_31626998_31627122_31630958_31631147_31638643_31638761_31645354_31645480_31657975_31658090_31666255_31666373_31684311
transcript_65269.known	chr18	-	6230	29	FSM	ENSG00000153339.15	ENST00000283351.10	6230	29	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_17	26.3696253833296	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTCCTGAATATTACTC	-31936978	True	NA	NA	False	AATAAA	-20	NA	31943128	31829196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_31830990_31832083_31832174_31839311_31839458_31846715_31846818_31849565_31849740_31852445_31852505_31852594_31852664_31853848_31853946_31855659_31855808_31857539_31857983_31864626_31864782_31866848_31866976_31867401_31867477_31870371_31870503_31870925_31871121_31873429_31873539_31874479_31874705_31890734_31890867_31897785_31897892_31900924_31901026_31907459_31907611_31908302_31908419_31908753_31909011_31909666_31909761_31913368_31913523_31916271_31916447_31917577_31917668_31931328_31931524_31942607
transcript_65272.nnic	chr18	+	808	2	Antisense	novelGene_ENSG00000153339.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	958	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTTTCTAATCAACAGATA	31819166	False	NA	14	True	AATAAA	-18	NA	31819176	31829908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_+_31819445_31829368
transcript_65277.known	chr18	+	3551	8	FSM	ENSG00000134758.14	ENST00000261593.8	3551	8	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_1	63.9639566873567	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGTGTCTAATTAAAAT	32084718	True	NA	10	True	ATTAAA	-16	NA	32091873	32131561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_32092236_32092699_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_65288.nic	chr18	+	2404	7	ISM	ENSG00000134758.14	ENST00000261593.8	3551	8	765	846	-24	0	3prime_fragment	FALSE	canonical	3	491	junction_1	36.922215534824	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32085483	False	NA	7	True	AATAAA	-15	NA	32092638	32130715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_32092887_32111753_32111920_32113744_32113861_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_6529.known	chr1	+	3325	15	FSM	ENSG00000088035.18	ENST00000263440.6	3325	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_7	76.1510314561578	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTGATTCAAGGTATC	63365091	True	NA	NA	False	AATAAA	-32	NA	63367626	63438553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411145_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_65291.known	chr18	+	5573	6	FSM	ENSG00000101695.9	ENST00000217740.4	5573	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	12.6712272491657	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTACTATTTTACTC	32018763	True	NA	42	True	ATTAAA	-31	NA	32018824	32073219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32065901_32066010_32068297
transcript_65302.nnic	chr18	+	1039	5	NNC	ENSG00000263917.1	novel	565	5	NA	NA	-253	-23635	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_4	22.1852991866236	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAATTGGCACTGGTCATT	32017214	True	NA	NA	False	AATAAA	-19	NA	32018575	32088144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_32019028_32037115_32037270_32042178_32042274_32045641_32045733_32087897
transcript_65304.known	chr18	+	2071	5	FSM	ENSG00000134758.14	ENST00000257190.9	2071	5	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	229.18224189496	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGCAGTTTTGTAAAAAC	32090338	True	NA	7	True	AATAAA	-15	NA	32092689	32130715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_32092887_32123517_32123575_32124733_32124846_32126692_32126801_32129118
transcript_65308.known	chr18	-	473	2	FSM	ENSG00000265008.1	ENST00000582233.1	473	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-32092045	False	NA	NA	False	NA	NA	NA	32092119	32091294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_32091503_32091854
transcript_65309.nnic	chr18	-	276	2	Antisense	novelGene_ENSG00000263765.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	21	junction_1	0	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGGGAAGTTTTTTCT	-32862680	False	NA	NA	False	AATAAA	-15	NA	32862695	32855272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_32855440_32862586
transcript_6531.known	chr1	+	1841	15	FSM	ENSG00000088035.18	ENST00000647818.1	1841	15	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_7	72.8532561988516	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCATGGAACCACAGGAAAG	63365039	True	NA	-70	True	TATAAA	-20	NA	63367574	63437126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63367688_63370770_63371060_63396512_63396598_63402253_63402344_63404452_63404542_63406316_63406400_63407061_63407127_63411254_63411332_63411925_63412062_63414060_63414147_63415872_63415958_63419369_63419441_63428732_63428802_63428927_63429127_63436822
transcript_65312.known	chr18	+	2671	17	FSM	ENSG00000134769.23	ENST00000598774.6	2671	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	17.4936372361496	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAACAAATTAAA	34492149	True	NA	NA	False	NA	NA	NA	34493330	34866980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34848295_34848384_34851830_34851929_34858284_34858399_34863965_34864063_34866110
transcript_65315.known	chr18	+	1706	13	FSM	ENSG00000134769.23	ENST00000315456.10	1706	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	18.1266761677062	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTCTCTGAGTGGGCCT	34492135	True	NA	10	True	AATAAA	-20	NA	34493316	34829328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34794036_34794251_34806218_34806305_34811958_34812114_34815908_34816015_34818163_34818331_34820790_34820916_34825266_34825276_34827592_34827677_34829040
transcript_65321.nnic	chr18	+	780	5	NNC	ENSG00000134769.23	novel	1508	11	NA	NA	-31	6195	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	19.3002590656188	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAGAAAAGGTCTATAAT	34493242	False	NA	NA	False	ATTAAA	-20	NA	34493259	34772222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_34493515_34679467_34679593_34755975_34756044_34765960_34766042_34771971
transcript_65323.known	chr18	+	4212	7	FSM	ENSG00000166974.13	ENST00000300249.10	4212	7	0	0	0	0	multi-exon	FALSE	canonical	3	316	junction_3	24.9844396019247	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCCTGGAGTTACAGATT	35038199	True	NA	17	True	AATAAA	-21	NA	35041412	35143470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35041662_35070194_35070323_35097445_35097592_35101945_35102160_35126947_35127088_35132031_35132191_35140294
transcript_65330.nnic	chr18	+	2263	5	NNC	ENSG00000186812.13	novel	5259	4	NA	NA	0	2623	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	12.8452325786651	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236485	True	NA	NA	False	ACTAAA	-14	NA	35241033	35246723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_35241110_35241601_35241691_35242390_35242885_35243151_35243294_35245261
transcript_65337.nnic	chr18	+	1371	5	NNC	ENSG00000186812.13	novel	1419	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	16.6282891483159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTTGGAGGGTGAAT	35236485	True	NA	NA	False	AATAAA	-20	NA	35241033	35258394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_35241110_35242390_35242885_35243151_35243294_35254210_35254403_35257927
transcript_65348.known	chr18	+	5259	4	FSM	ENSG00000186812.13	ENST00000330501.12	5259	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	10.6144555520604	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTATACTGGTTATGTGT	35236485	True	NA	NA	False	ATTAAA	-18	NA	35241033	35249808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35245261
transcript_65357.nic	chr18	+	2750	4	NIC	ENSG00000186812.13	novel	5259	4	NA	NA	2	2623	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	12.0369800568452	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236490	True	NA	NA	False	ACTAAA	-14	NA	35241038	35246723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_35241691_35242390_35242885_35243151_35243294_35245261
transcript_65365.known	chr18	-	4323	5	FSM	ENSG00000186814.14	ENST00000420878.7	4323	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.6061145863396	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAAAGTTTGCTTTGAAAT	-35289523	True	NA	-10	True	AATAAA	-10	NA	35290232	35251067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35267475_35267680_35290083
transcript_65366.known	chr18	-	4122	4	FSM	ENSG00000186814.14	ENST00000333206.10	4122	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	18.2391520270726	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGCTTTGAAATTATTCA	-35289520	True	NA	-4	True	AATAAA	-16	NA	35290229	35251061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35254382_35263512_35263658_35263944_35264456_35290083
transcript_65370.nnic	chr18	-	983	4	NNC	ENSG00000186814.14	novel	731	3	NA	NA	394	1633	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	20.6774165590278	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACTCCCAACTTTAA	-35266529	True	NA	NA	False	ATTAAA	-20	NA	35267554	35259009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_35259258_35263512_35263658_35263944_35264456_35267475
transcript_65377.nnic	chr18	+	796	3	NNC	ENSG00000186812.13	novel	5259	4	NA	NA	0	21	at_least_one_novel_splicesite	FALSE	canonical	3	7	junction_1	3	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTTGAATGGTCTTTTT	35236485	True	NA	NA	False	AATAGA	-15	NA	35241033	35243021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_35241110_35241601_35241691_35242390
transcript_65378.known	chr18	+	1516	3	FSM	ENSG00000186812.13	ENST00000591206.5	1516	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	11.5	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGCCACAGTGTATTCAAT	35236488	True	NA	3	True	ATTAAA	-17	NA	35241036	35244100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151
transcript_65381.nic	chr18	+	1678	3	ISM	ENSG00000186812.13	ENST00000589420.1	1025	6	-15	20410	0	2623	5prime_fragment	FALSE	canonical	0	0	junction_1	9.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGACCCAATAAAGAACAGT	35236487	True	NA	NA	False	ACTAAA	-14	NA	35241035	35246723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_35241110_35243151_35243294_35245261
transcript_65383.known	chr18	+	2046	3	FSM	ENSG00000186812.13	ENST00000585800.1	2046	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	14	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATAGTCCTATTAAAGACTG	35236508	True	NA	-28	True	NA	NA	NA	35241056	35244069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241691_35242390_35242885_35243151
transcript_65390.known	chr18	+	690	2	FSM	ENSG00000186812.13	ENST00000589630.1	690	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATAGAGCCATACTTGTCT	NA	False	NA	NA	False	GATAAA	-39	NA	35241029	35243000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390
transcript_65392.known	chr18	-	4382	2	FSM	ENSG00000268573.1	ENST00000586922.2	4382	2	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGGAAATAAATCAA	-35289492	True	NA	NA	False	TTTAAA	-22	NA	35290201	35280866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35285178_35290130
transcript_65393.known	chr18	+	2162	5	FSM	ENSG00000186812.13	ENST00000355632.8	2162	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.6282891483159	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATCCAGGCTGGAGTGCA	35236506	True	NA	NA	False	NA	NA	NA	35241054	35259227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35241110_35242390_35242885_35243151_35243294_35254231_35254403_35257927
transcript_65394.known	chr18	+	1104	3	FSM	ENSG00000186812.13	ENST00000592264.1	1104	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	19.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAACAGTTGGAGGGTGAAT	35242377	False	NA	NA	False	AATAAA	-20	NA	35242389	35258394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35242885_35243151_35243294_35257927
transcript_65398.known	chr18	+	5124	3	FSM	ENSG00000257267.4	ENST00000399070.3	5124	3	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	77	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTACTGGTTCCTGTTGAA	35287642	True	NA	17	True	AATAAA	-17	NA	35290281	35310766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35290392_35291009_35291233_35305975
transcript_65403.known	chr18	+	2191	2	FSM	ENSG00000257267.4	ENST00000638208.2	2233	2	42	0	12	0	multi-exon	FALSE	canonical	3	84	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAACCACC	35287696	True	NA	NA	False	NA	NA	NA	35290335	35308110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35290392_35305975
transcript_65408.known	chr18	-	6282	4	FSM	ENSG00000172466.16	ENST00000399061.3	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_3	16.1314048434171	629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCCTGTGTCAACTTTT	-35339158	True	NA	-20	True	AATAAA	-21	NA	35344456	35332226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35337771_35339828_35339977_35340230_35340734_35344369
transcript_65409.known	chr18	-	3661	4	FSM	ENSG00000186496.12	ENST00000589332.7	3661	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.49443825784929	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTATTGTTTTCTGGCTT	-35377268	True	NA	NA	False	AGTAAA	-16	NA	35377337	35366693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35369661_35373455_35373601_35373875_35374365_35377277
transcript_6541.known	chr1	+	629	4	FSM	ENSG00000088035.18	ENST00000462390.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	123.190908755476	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACTCGGTTCTTTCACTT	63419383	False	NA	NA	False	AATAAA	-13	NA	63419393	63429829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63419441_63428732_63428802_63428927_63429127_63429515
transcript_65413.known	chr18	-	904	7	FSM	ENSG00000153391.16	ENST00000441607.6	904	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	145.313071982148	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTAGTGTG	-35494563	True	NA	0	True	NA	NA	NA	35497943	35468462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385_35487440_35489331_35489386_35497718
transcript_65416.nnic	chr18	-	768	6	Fusion	ENSG00000267583.5_ENSG00000153391.16	novel	789	3	NA	NA	0	0	multi-exon	FALSE	canonical	3	16	junction_2	148.493232169012	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTTTGG	-35494580	True	NA	0	True	AATAAA	-19	NA	35497960	35443868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_-_35444023_35446874_35446956_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_65424.known	chr18	-	3245	5	FSM	ENSG00000153391.16	ENST00000592173.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	132.222114262328	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAACTTCACTTGGTCATG	-35494553	True	NA	-9	True	AATAAA	-20	NA	35497933	35452229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35454969_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_65427.known	chr18	-	408	5	FSM	ENSG00000153391.16	ENST00000591139.1	408	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	121.48328074266	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTCAGCACCATTGAAGAGT	-35487083	False	NA	NA	False	NA	NA	NA	35487470	35468710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35487385
transcript_6543.known	chr1	-	1044	10	FSM	ENSG00000142856.17	ENST00000371092.7	1044	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	207.667528682594	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	-63518859	True	NA	-13	True	AATAAA	-16	NA	63523194	63440772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63510064_63510182_63523128
transcript_65431.known	chr18	-	943	5	FSM	ENSG00000153391.16	ENST00000334598.12	943	5	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_1	17.0055138117024	946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAAGTCCCTGAATTTTT	-35494580	True	NA	-7	True	AATAAA	-18	NA	35497960	35468332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35479299_35479412_35480452_35480564_35497718
transcript_65440.known	chr18	-	455	3	FSM	ENSG00000267140.1	ENST00000589258.1	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	7.5	84	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCCAGTCTATGGTATTTT	-35494560	True	NA	-2	True	AATAAA	-17	NA	35497940	35443870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35444023_35446874_35446956_35497718
transcript_65443.known	chr18	-	382	3	FSM	ENSG00000153391.16	ENST00000587450.1	382	3	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	136	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTGACGTCGTCACCGG	-35494580	True	NA	NA	False	NA	NA	NA	35497960	35468670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35478281_35478350_35497718
transcript_65444.known	chr18	-	595	2	FSM	ENSG00000153391.16	ENST00000590757.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCCCAAGTCCCTGAATTTT	-35494524	True	NA	-8	True	AATAAA	-17	NA	35497904	35468333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35468743_35497718
transcript_65446.known	chr18	+	3970	12	FSM	ENSG00000141429.14	ENST00000269195.6	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_1	85.9333780003175	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTGCCTTACATTGGTTT	35581641	False	NA	29	True	ATTAAA	-42	NA	35581739	35711834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35581863_35654559_35654802_35663627_35663803_35677590_35677758_35683390_35683599_35687015_35687187_35689172_35689291_35691011_35691193_35692180_35692321_35702896_35702996_35703508_35703644_35709623
transcript_65453.known	chr18	+	985	5	FSM	ENSG00000141428.17	ENST00000592875.6	985	5	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	30.1122898498271	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	35968984	True	NA	8	True	TATAAA	-19	NA	35972678	35979278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35972806_35972884_35972908_35974895_35975096_35977409_35977601_35978834
transcript_65469.known	chr18	+	703	4	FSM	ENSG00000141428.17	ENST00000269194.10	703	4	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_1	137.211110661232	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAAAGATTCCAAAGGTGG	35968939	True	NA	NA	False	ACTAAA	-25	NA	35972633	35978939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35972841_35974895_35975096_35977409_35977601_35978834
transcript_65475.known	chr18	+	958	4	FSM	ENSG00000141428.17	ENST00000333234.5	958	4	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	31.0411912715275	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGGCATTACTGTTTTT	35969090	False	NA	8	True	TATAAA	-19	NA	35972784	35979278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_35972908_35974895_35975096_35977409_35977601_35978834
transcript_65479.known	chr18	-	1945	9	FSM	ENSG00000141425.18	ENST00000590898.5	1945	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	272.485980143933	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-36052768	True	NA	-1	True	AATAAA	-25	NA	36067530	35989823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_65482.known	chr18	-	1850	8	FSM	ENSG00000141425.18	ENST00000357384.8	1850	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	201.244596834554	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTGTATCTGATGACAGTA	-36052794	True	NA	-63	True	NA	NA	NA	36067556	35989885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35990596_35993101_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_65483.known	chr18	-	1264	8	FSM	ENSG00000141425.18	ENST00000588737.5	1264	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_6	256.842761396214	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAACAACGAGTAATTTATA	-36052797	True	NA	NA	False	AAGAAA	-12	NA	36067559	35993039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36040806_36040866_36067253
transcript_65488.known	chr18	-	4421	7	FSM	ENSG00000141425.18	ENST00000399022.9	4421	7	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	77.6410902093015	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTGTTTTGTGAATCTG	-36052797	True	NA	-1	True	AATAAA	-25	NA	36067559	35989823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_35993301_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_65490.known	chr18	-	1022	7	FSM	ENSG00000141425.18	ENST00000589050.1	1022	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	237.753665703719	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052795	True	NA	-7	True	AATAAA	-13	NA	36067557	36025598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36025679_36026899_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_65497.nic	chr18	-	2280	6	ISM	ENSG00000141425.18	ENST00000357384.8	1850	8	-38	35713	-18	0	5prime_fragment	FALSE	canonical	3	577	junction_5	54.5688555863141	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGCCTGTATTGTCTCATGT	-36052832	True	NA	-7	True	AATAAA	-13	NA	36067594	36025598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_36027076_36027183_36027311_36030807_36030906_36030990_36031098_36033707_36033838_36067253
transcript_65504.known	chr18	-	3003	10	FSM	ENSG00000141424.13	ENST00000590986.5	3003	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	73.3572351620294	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAGAATTGGGGAGGCAT	-36122842	True	NA	NA	False	AATAAA	-17	NA	36129381	36109147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36126218_36127017_36129100
transcript_65505.nic	chr18	-	2822	9	NIC	ENSG00000141424.13	novel	3566	10	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_8	81.087048133472	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCAGATGTCTGGTTTTCT	-36122855	True	NA	-1	True	AATAAA	-19	NA	36129394	36108530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_36109746_36111058_36111250_36112500_36112582_36114096_36114475_36116673_36116780_36122051_36122271_36123494_36123665_36124519_36124701_36129113
transcript_65508.nnic	chr18	-	1248	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-72	-267	-72	267	multi-exon	FALSE	canonical	3	19	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CTTTAAAAAAAAAATTAAGT	-36129353	False	NA	NA	False	NA	NA	NA	36129412	36127778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36128728_36129113
transcript_65509.nnic	chr18	-	479	2	FSM	ENSG00000288917.1	ENST00000690777.1	909	2	-72	502	-72	-502	multi-exon	FALSE	canonical	3	19	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAAGCCCCAAAGATTCC	-36129353	False	NA	NA	False	AGTAAA	-14	NA	36129412	36128547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36128728_36129113
transcript_65510.known	chr18	+	2722	23	FSM	ENSG00000134759.14	ENST00000442325.6	2722	23	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	157.084128904606	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTACATGCTTGCAGTCAC	36123873	True	NA	17	True	AATAAA	-23	NA	36129897	36174651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36139418_36139614_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_65517.known	chr18	+	8432	22	FSM	ENSG00000134759.14	ENST00000358232.11	8432	22	0	0	0	0	multi-exon	FALSE	canonical	3	461	junction_5	49.7146962216221	424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCTTTGGTAAACCCC	36123874	True	NA	8	True	AATAAA	-22	NA	36129898	36180557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_65519.known	chr18	+	2542	22	FSM	ENSG00000134759.14	ENST00000539560.5	2542	22	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_18	121.659015694577	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGAGTTTCTGGGTTT	36123876	True	NA	27	True	NA	NA	NA	36129900	36174721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36138794_36138873_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167152_36167223_36170062_36170197_36171046_36171161_36174484
transcript_65536.known	chr18	+	2453	21	FSM	ENSG00000134759.14	ENST00000351393.10	2453	21	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	123.868428180873	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAACTACATGCTTGCAGT	36123866	True	NA	14	True	AATAAA	-20	NA	36129890	36174648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306_36136378_36138269_36138427_36141136_36141202_36142280_36142348_36142825_36142967_36144938_36145035_36145947_36146049_36146249_36146382_36154849_36155000_36156465_36156655_36158834_36158905_36159734_36159831_36159957_36160016_36160931_36161005_36164474_36164668_36167100_36167223_36170062_36170197_36171046_36171161_36174484
transcript_65561.known	chr18	+	583	3	FSM	ENSG00000134759.14	ENST00000541190.5	583	3	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_2	11	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTTAAGTTTTTTTCT	36123869	True	NA	NA	False	NA	NA	NA	36129893	36136632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36130072_36133237_36133317_36136306
transcript_65562.known	chr18	-	609	2	FSM	ENSG00000260552.2	ENST00000568654.2	620	2	11	0	2	0	multi-exon	FALSE	canonical	2	16	junction_1	0	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACAATTTTTTTTCACA	-36187346	True	NA	NA	False	AATAAA	-30	NA	36187448	36179995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36180391_36187234
transcript_65563.known	chr18	+	636	3	FSM	ENSG00000134759.14	ENST00000536830.1	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	599	junction_1	13	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGAGATGGAGTCTT	36169918	False	NA	51	True	NA	NA	NA	36169935	36174745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36170197_36171046_36171161_36174484
transcript_65564.nnic	chr18	+	1025	2	NNC	ENSG00000075643.6	novel	6182	15	NA	NA	22	-72486	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTGATAAGTGAATGAAT	36185747	True	NA	24	True	AATAAA	-37	NA	36187518	36194328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36187682_36193466
transcript_65566.known	chr18	+	4853	10	FSM	ENSG00000150477.15	ENST00000280020.10	4853	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_7	15.4488403016753	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGGTTTGATATTGAATT	36827560	True	NA	12	True	AATAAA	-25	NA	36829126	37225334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_37066889_37067546_37160199_37160382_37172972_37173082_37222016
transcript_65570.nnic	chr18	+	1050	7	NNC	ENSG00000150477.15	novel	4853	10	NA	NA	0	17648	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	15.6569118567133	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTATGGCCATTTATTT	36827539	True	NA	NA	False	AATAAA	-16	NA	36829105	36973500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_36973059
transcript_65571.nnic	chr18	+	1373	7	NNC	ENSG00000150477.15	novel	4853	10	NA	NA	0	24343	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_6	15.91295768304	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGCCTGTGGTATTCTCT	36827539	True	NA	NA	False	AATAAA	-22	NA	36829105	36980195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36959307_36959436_36979431
transcript_65575.nnic	chr18	+	662	6	NNC	ENSG00000150477.15	novel	4853	10	NA	NA	0	10981	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	15.3153517752613	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTTATAATGTGTGTG	36827539	True	NA	5	True	ATTAAA	-18	NA	36829105	36897385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556_36885673_36897204
transcript_65578.known	chr18	+	1190	5	FSM	ENSG00000150477.15	ENST00000592521.5	1190	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	2.8613807855649	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAGATGTTGTAATTGGTA	36827562	True	NA	NA	False	ATTAAA	-19	NA	36829128	36886404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_36829197_36834319_36834356_36835233_36835377_36844207_36844303_36885556
transcript_65583.nic	chr18	+	1120	4	ISM	ENSG00000150477.15	ENST00000590617.5	1835	10	-25	335901	0	2	5prime_fragment	FALSE	canonical	0	0	junction_3	18.7320284243028	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGTTGTAATTGGTAAG	36827539	True	NA	NA	False	ATTAAA	-21	NA	36829105	36886406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_36829197_36834319_36834356_36835233_36835377_36885556
transcript_65594.known	chr18	-	803	7	FSM	ENSG00000134779.15	ENST00000591823.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	465.53445987739	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCCCAACTTCCCTATC	-36828705	False	NA	NA	False	NA	NA	NA	36828773	36798377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36823802_36823872_36828682
transcript_65599.known	chr18	-	1239	7	FSM	ENSG00000134779.15	ENST00000590842.5	1239	7	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_1	329.843734045212	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAGCCAAGGGTTAAGTC	-36828774	False	NA	-4	True	AATAAA	-16	NA	36828842	36786572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36787080_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_65600.known	chr18	-	3835	7	FSM	ENSG00000134779.15	ENST00000334295.9	3835	7	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_1	91.5600895587155	542	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATGCATTTTACTATTC	-36825170	True	NA	-14	True	ACTAAA	-20	NA	36829002	36794107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_65601.known	chr18	-	1726	6	FSM	ENSG00000134779.15	ENST00000383056.7	1726	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	403.702068362301	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTCCAGTGAAGTTTCTT	-36828918	False	NA	-26	True	TATAAA	-17	NA	36828986	36796071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36797051_36798448_36798610_36800197_36800312_36807846_36807935_36818893_36818974_36828682
transcript_65602.known	chr18	-	1102	6	FSM	ENSG00000134779.15	ENST00000589049.5	1102	6	0	0	0	0	multi-exon	FALSE	canonical	3	929	junction_1	76.8749634146254	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGGTGTTCCTTTTTTC	-36823822	True	NA	-21	True	CATAAA	-14	NA	36828781	36798017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_65603.known	chr18	-	2079	7	FSM	ENSG00000134779.15	ENST00000587382.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	390.880380963566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTTGAGGTAACTGGT	-36828662	False	NA	NA	False	ATTAAA	-18	NA	36828730	36788692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_36790152_36798448_36798610_36800197_36800312_36805373_36805503_36807846_36807935_36818893_36818974_36828682
transcript_65608.known	chr18	-	579	2	FSM	ENSG00000101489.20	ENST00000590011.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGCAGGCTGGGGCAAGTGG	-37253849	True	NA	NA	False	GGGGCT	-22	NA	37253981	37244833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_37245198_37253766
transcript_65618.known	chr18	-	801	1	FSM	ENSG00000175886.10	ENST00000588490.1	801	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	349	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTACACTGTTGAGTTTTC	-39335630	False	NA	NA	False	ACTAAA	-10	NA	39335672	39334871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_39334900_39335700
transcript_65622.nnic	chr18	-	728	5	NNC	ENSG00000267413.1	novel	1115	5	NA	NA	-27	-30723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.27760839478607	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATTCGTAAAGTATCCA	-39924769	True	NA	NA	False	AATAAA	-17	NA	39924867	39871896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_39872213_39876303_39876396_39879230_39879306_39921798_39921830_39924653
transcript_65629.nnic	chr18	-	644	4	NNC	ENSG00000267413.1	novel	1115	5	NA	NA	-27	-30723	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.82842712474619	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGATTCGTAAAGTATCCA	-39924769	True	NA	NA	False	AATAAA	-17	NA	39924867	39871896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_39872213_39909523_39909607_39921798_39921830_39924653
transcript_65650.nnic	chr18	-	866	4	NIC	ENSG00000267313.7	novel	549	5	NA	NA	-37	-1648	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	10.8730042868667	37	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGCCATGCTCTGGG	-41631487	True	NA	4	True	AATAAA	-16	NA	41632222	41467430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_41467781_41501119_41501277_41516419_41516556_41631999
transcript_65651.nnic	chr18	-	709	3	NIC	ENSG00000267313.7	novel	2311	2	NA	NA	-37	-1648	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTGCCATGCTCTGGG	-41631487	True	NA	4	True	AATAAA	-16	NA	41632222	41467430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_41467781_41516419_41516556_41631999
transcript_65656.known	chr18	+	9415	25	FSM	ENSG00000078142.14	ENST00000262039.9	9415	25	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_11	17.5639703813106	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATGTTTTAATTTCAATA	41952088	True	NA	NA	False	AATAAA	-20	NA	41955233	42087830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458_41990555_41993269_41993342_41995889_41995995_41996637_41996731_42004355_42004542_42013441_42013597_42015475_42015567_42020637_42020706_42027442_42027549_42029324_42029442_42033825_42033958_42037691_42037821_42038780_42038851_42040676_42040742_42043732_42043818_42049530_42049606_42057882_42058052_42064739_42064831_42067387_42067514_42081122
transcript_65666.nic	chr18	+	2190	6	ISM	ENSG00000078142.14	ENST00000262039.9	9415	25	-42	95900	-42	1328	5prime_fragment	FALSE	canonical	3	117	junction_2	7.11055553385247	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTATATGTCATTTCATTAAA	41952046	True	NA	NA	False	AATAAA	-21	NA	41955191	41991930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_41955360_41957569_41957759_41962488_41962633_41970326_41970457_41987811_41987899_41990458
transcript_65667.known	chr18	+	733	4	FSM	ENSG00000078142.14	ENST00000588156.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	16.2685791225499	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGAGAGTTCTGGAGGAAGT	NA	False	NA	38	True	AATAAA	-38	NA	42057834	42081421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_42058052_42064739_42064831_42067387_42067514_42081122
transcript_65668.known	chr18	+	536	3	FSM	ENSG00000078142.14	ENST00000587328.2	536	3	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	17.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTCTTATTTATGTAC	NA	False	NA	13	True	AATAAA	-13	NA	42064694	42081396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_42064831_42067387_42067514_42081122
transcript_65679.nnic	chr18	-	825	2	NNC	ENSG00000152214.14	novel	1086	5	NA	NA	229149	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTAAAGAGTCTAGCTT	NA	False	NA	-28	True	AATAAA	-25	NA	42744946	42743223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_42743721_42744618
transcript_65680.known	chr18	-	3936	4	FSM	ENSG00000132872.12	ENST00000255224.8	3936	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	3.39934634239519	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTTTCAATGCAGACTTT	-43277465	False	NA	-25	True	AATAAA	-18	NA	43277490	43267891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_43270649_43271711_43271833_43273579_43274395_43277247
transcript_65683.known	chr18	-	12688	44	FSM	ENSG00000152223.15	ENST00000282041.11	12688	44	0	0	0	0	multi-exon	TRUE	canonical	2	14	junction_32	7.98220031718897	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACATGGCGGGCCTGTCTCA	-45966110	True	NA	-3	True	AATAAA	-21	NA	45967329	45847608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_45852650_45855572_45855688_45857852_45858069_45858565_45858783_45860103_45860347_45865614_45865760_45866797_45867008_45867562_45867749_45870566_45870743_45876235_45876343_45878375_45878449_45879012_45879215_45880074_45880224_45882273_45882488_45884616_45884812_45887750_45887908_45889797_45889941_45899403_45899567_45900995_45901168_45903972_45904118_45907957_45908082_45910520_45910743_45912289_45912457_45913705_45913829_45915510_45915622_45916008_45916207_45916437_45916583_45917678_45917820_45922340_45922601_45923267_45923388_45925737_45925903_45928868_45929010_45930675_45930831_45934808_45934967_45939599_45939756_45943160_45943312_45944004_45944120_45946662_45946769_45948502_45948577_45949483_45949592_45951101_45951239_45952399_45952644_45954393_45955339_45967176
transcript_65685.known	chr18	-	1945	13	FSM	ENSG00000152234.16	ENST00000282050.6	1945	13	0	0	0	0	multi-exon	FALSE	canonical	1	399	junction_12	1906.8349048008	17663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTCTGTCATTTGTGTTA	-46104081	True	NA	-10	True	AATAAA	-20	NA	46104233	46084143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46098171_46098280_46104136
transcript_65686.known	chr18	-	2214	12	FSM	ENSG00000152234.16	ENST00000586592.5	2214	12	0	0	0	0	multi-exon	FALSE	canonical	2	147	junction_11	2046.57532526498	7566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055850	True	NA	-16	True	AATAAA	-14	NA	46098315	46084149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46095052_46095132_46097835
transcript_65691.known	chr18	-	1793	12	FSM	ENSG00000152234.16	ENST00000590665.5	1793	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2104.62781303606	6721	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055831	True	NA	-16	True	AATAAA	-14	NA	46098296	46084149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089888_46089997_46091681_46091852_46095052_46095132_46098171
transcript_65692.known	chr18	-	1931	12	FSM	ENSG00000152234.16	ENST00000590156.5	1931	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_10	2100.04038135122	7491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGTTGTTTTCTGTCATTT	-46055830	True	NA	-16	True	AATAAA	-14	NA	46098295	46084149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46084364_46084503_46084655_46086112_46086258_46086386_46086495_46087007_46087233_46087340_46087493_46088108_46088258_46089565_46089733_46089822_46089997_46091681_46091852_46094979_46095132_46098171
transcript_65696.known	chr18	+	1072	9	FSM	ENSG00000152240.13	ENST00000282058.11	1072	9	0	0	0	0	multi-exon	FALSE	canonical	3	983	junction_4	64.3229158232119	8531	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCTGTGTGGTTGG	46095975	True	NA	25	True	ATTAAA	-16	NA	46104384	46128333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_65697.known	chr18	+	1098	9	FSM	ENSG00000152240.13	ENST00000591715.5	1098	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	365.02754604961	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTACTTTGTTTCTGTGTGGT	46095986	True	NA	22	True	ATTAAA	-13	NA	46104395	46128330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105409_46118180_46118317_46119925_46120061_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_65698.known	chr18	+	531	3	FSM	ENSG00000152240.13	ENST00000591098.1	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_2	48.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAATATGGTATTGGTTAA	46095970	True	NA	NA	False	NA	NA	NA	46104379	46118474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46118180
transcript_65699.known	chr18	+	506	6	FSM	ENSG00000152240.13	ENST00000585518.5	506	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	438.021734620555	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTTCTTTTTCCTCTTG	46095992	True	NA	68	True	AATAAA	-40	NA	46104401	46128179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_65700.known	chr18	+	616	7	FSM	ENSG00000152240.13	ENST00000589554.5	616	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	419.201787793049	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGACTTTACAGAGTTCTT	46095996	True	NA	58	True	AATAAA	-30	NA	46104405	46128169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46104442_46105193_46105369_46122466_46122591_46123298_46123365_46124821_46124894_46125743_46125792_46128074
transcript_65703.known	chr18	+	5456	5	FSM	ENSG00000152242.11	ENST00000615052.5	5456	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	54.8497948947852	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCTTCTGAGGTTTTTTTT	46171806	True	NA	26	True	AATAAA	-23	NA	46174033	46266992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46174331_46215810_46216596_46240004_46240188_46253696_46253824_46262928
transcript_65705.nic	chr18	+	1860	4	NIC	ENSG00000152242.11	novel	586	3	NA	NA	-53	-3320	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	53.5599352750418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAAGTCTTCTGCCTTCT	NA	False	NA	3	True	ATTAAA	-17	NA	46173499	46263663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_46173713_46215810_46216596_46253696_46253824_46262928
transcript_65707.known	chr18	+	5264	4	FSM	ENSG00000152242.11	ENST00000619301.4	5264	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	14.522013940528	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAATGATATCTTCTGAG	46171806	True	NA	17	True	AATAAA	-14	NA	46174033	46266983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46174331_46215810_46216596_46253696_46253824_46262928
transcript_65712.nnic	chr18	-	336	2	Antisense	novelGene_ENSG00000141622.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	72	junction_1	0	573	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAATCCAAAGAATTTCT	NA	False	NA	NA	False	AATAAA	-17	NA	46433579	46429231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_46429415_46433426
transcript_65718.known	chr18	-	11243	14	FSM	ENSG00000078043.16	ENST00000585916.6	11243	14	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	63.5668589921681	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCATTGCTTTCATTGGTCA	-46910744	True	NA	NA	False	ATTAAA	-31	NA	46917507	46803217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_6572.known	chr1	-	961	9	FSM	ENSG00000142856.17	ENST00000271002.15	961	9	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_2	77.2551575948169	1343	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTGGTAGAACTCTGTGT	-63518890	True	NA	-10	True	AATAAA	-19	NA	63523225	63440769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63441104_63446805_63446857_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_65726.known	chr18	-	2043	13	FSM	ENSG00000078043.16	ENST00000398654.7	2043	13	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	126.823669145612	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGACTGCAACAAGAACCAAA	-46910691	True	NA	NA	False	NA	NA	NA	46917454	46812279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46812613_46815311_46815350_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46890579_46891055_46917321
transcript_65727.known	chr18	-	4543	13	FSM	ENSG00000078043.16	ENST00000324794.11	4543	13	0	0	0	0	multi-exon	FALSE	canonical	3	214	junction_1	65.384068310934	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTTTTTTTTTTTAGAT	-46910740	True	NA	2	True	AATAAA	-24	NA	46917503	46815710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_6573.known	chr1	-	1285	10	FSM	ENSG00000142856.17	ENST00000489099.5	1285	10	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	183.361883298884	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTTTGGTAGAACTCTG	NA	False	NA	-13	True	AATAAA	-16	NA	63523502	63440772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63441104_63446805_63446857_63447564_63447615_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_65730.known	chr18	-	1590	12	FSM	ENSG00000078043.16	ENST00000545673.5	1590	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	134.23748537327	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGTTTATGACTCAAATA	-46910742	True	NA	25	True	NA	NA	NA	46917505	46818190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46818448_46820932_46821073_46827958_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46917321
transcript_65733.known	chr18	-	1838	11	FSM	ENSG00000078043.16	ENST00000590127.5	1838	11	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_2	25.9383885389976	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGCGTGTGAGGTATTTA	-46910711	True	NA	NA	False	NA	NA	NA	46917474	46827757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_46828131_46829733_46829868_46836356_46836518_46844053_46844128_46844733_46844840_46846706_46846842_46855344_46855436_46855564_46855616_46864163_46864249_46890579_46891055_46917321
transcript_6574.known	chr1	-	873	8	FSM	ENSG00000142856.17	ENST00000460394.5	873	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	182.970723653501	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTGATTTTGAGCTATA	-63518847	True	NA	NA	False	ATTAAA	-15	NA	63523182	63451724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_63452065_63453917_63453975_63454379_63454474_63454889_63454969_63478763_63478834_63490082_63490219_63508527_63508571_63523128
transcript_65745.nnic	chr18	+	963	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-59	318	-55	-122	multi-exon	FALSE	canonical	3	53	junction_1	34.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	NA	False	NA	24	True	NA	NA	NA	46868584	46875445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_65747.nnic	chr18	+	1083	3	FSM	ENSG00000289168.1	ENST00000688132.1	1222	3	-59	198	-55	-2	multi-exon	FALSE	canonical	3	53	junction_1	34.5	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868584	46875565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868693_46868811_46868991_46874769
transcript_6575.known	chr1	+	2178	14	FSM	ENSG00000203965.13	ENST00000371088.5	2178	14	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_7	10.8954145938371	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGGTGTTCTTATTTA	63523099	True	NA	7	True	ATTAAA	-19	NA	63523524	63572693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63545915_63546058_63551724_63551835_63555357_63555516_63557113_63557248_63561708_63561858_63568309_63568520_63571020_63571129_63572441
transcript_65750.nnic	chr18	+	1039	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-19	122	-12	-122	multi-exon	FALSE	canonical	3	122	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGGCCCAAGAACCCTCC	46863531	True	NA	24	True	NA	NA	NA	46868627	46875445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868991_46874769
transcript_65752.nnic	chr18	+	1246	2	FSM	ENSG00000289168.1	ENST00000687635.1	1142	2	-106	2	-99	-2	multi-exon	FALSE	canonical	3	122	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868540	46875565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868991_46874769
transcript_65756.nnic	chr18	+	1167	2	FSM	ENSG00000289168.1	ENST00000690991.1	1127	2	-42	2	-42	-2	multi-exon	FALSE	canonical	3	13	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTCCGGGGAATATATGGG	NA	False	NA	NA	False	AATAAA	-15	NA	46868597	46875565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46868969_46874769
transcript_65759.known	chr18	+	2893	16	FSM	ENSG00000167216.19	ENST00000356157.12	2893	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_15	12.3367562817604	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACATGCTTAAACTTCTTC	46946584	True	NA	NA	False	AATAAA	-16	NA	46946834	47102243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350_47077462_47099242_47099406_47100253_47100357_47100865
transcript_65761.nic	chr18	+	1369	13	ISM	ENSG00000167216.19	ENST00000356157.12	2893	16	-39	24701	-1	0	5prime_fragment	FALSE	canonical	2	22	junction_4	7.42555646998182	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	46946545	True	NA	14	True	AATAAA	-22	NA	46946795	47077542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_46946924_47046456_47046528_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_65762.nic	chr18	+	1366	13	NIC	ENSG00000167216.19	novel	2893	16	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_3	9.08295106229247	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	46946545	True	NA	14	True	AATAAA	-22	NA	46946795	47077542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_46946924_47046456_47046528_47052879_47053047_47054398_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_65763.nic	chr18	+	1300	12	ISM	ENSG00000167216.19	ENST00000245121.10	3618	17	29192	24701	-3	0	internal_fragment	FALSE	canonical	0	0	junction_1	12.5941085531265	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAAAGCTGTGTTGTTTGG	46946543	True	NA	14	True	AATAAA	-22	NA	46946793	47077542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_46946924_47052879_47053047_47054395_47054439_47058234_47058353_47059555_47059655_47062971_47063071_47063283_47063362_47067020_47067120_47069219_47069284_47069481_47069601_47075276_47075369_47077350
transcript_6578.nnic	chr1	+	1675	7	NNC	ENSG00000203965.13	novel	2178	14	NA	NA	-31	852	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_6	13.0565011477893	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTGTCTCTGTGTCATT	NA	False	NA	NA	False	AATAAA	-32	NA	63523340	63535219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_63523635_63525571_63525760_63531819_63532032_63532669_63532757_63533453_63533650_63534094_63534217_63534643
transcript_65787.known	chr18	-	2224	7	FSM	ENSG00000167220.12	ENST00000588183.5	2224	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	164.297156261317	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGTGTTTTTGTTTTTGCA	-47146237	True	NA	-7	True	AATAAA	-17	NA	47150500	47107407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136301_47136450_47150377
transcript_65788.known	chr18	-	2185	7	FSM	ENSG00000167220.12	ENST00000300605.11	2185	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	182.945726621009	1266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGTGTTTTTGTTTTTG	-47146237	True	NA	-9	True	AATAAA	-15	NA	47150500	47107409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47130243_47130329_47134495_47134705_47136338_47136450_47150377
transcript_65806.known	chr18	-	788	4	FSM	ENSG00000167220.12	ENST00000587841.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_3	232.860950402214	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGAGTGTTCTCTGCTGTCTC	-47146213	True	NA	70	True	GGGGCT	-25	NA	47150476	47108377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47108786_47112976_47113041_47115131_47115349_47150377
transcript_65819.known	chr18	-	3679	3	FSM	ENSG00000134049.6	ENST00000256433.6	3679	3	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_1	57.5	3263	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTTCTCATTGATTTAT	-47168621	True	NA	NA	False	AGTAAA	-20	NA	47176364	47152833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47156233_47157435_47157538_47176186
transcript_65820.known	chr18	-	4109	9	FSM	ENSG00000215474.8	ENST00000425639.3	4109	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	2.11763429326218	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTGTGTTCATGTAGTTA	NA	False	NA	NA	False	AATAAA	-16	NA	47251660	47206168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47206893_47212085_47212152_47219942_47220011_47230458_47230558_47230934_47231001_47244907_47244983_47245497_47245562_47246570_47249231_47251373
transcript_6583.known	chr1	+	2337	11	FSM	ENSG00000079739.17	ENST00000371084.8	2337	11	0	0	0	0	multi-exon	FALSE	canonical	2	359	junction_3	114.307523811865	559	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCTTGTCGTCTTTTTTTC	63586256	True	NA	NA	False	AATAAA	-17	NA	63593410	63660245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63659585
transcript_65832.known	chr18	-	12075	11	FSM	ENSG00000175387.16	ENST00000402690.6	12075	11	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_10	75.1039279931483	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCCAGTTTTTACAGTCT	-47929825	True	NA	-92	True	AATAAA	-19	NA	47931141	47831550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930799
transcript_65845.known	chr18	-	10445	10	FSM	ENSG00000175387.16	ENST00000356825.8	10445	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	116.236455470076	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATGGGACTAATTTTTAA	-47931128	False	NA	-23	True	ATTAAA	-30	NA	47931146	47833095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520_47896810_47930799
transcript_65846.nic	chr18	-	1607	10	NIC	ENSG00000175387.16	novel	34626	11	NA	NA	-7	-272	combination_of_known_junctions	FALSE	canonical	3	29	junction_9	95.9144423270739	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTGCAAATTACTGAGCT	-47927564	True	NA	-7	True	AATAAA	-24	NA	47930369	47845183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47870474_47870565_47896520_47896810_47930251
transcript_65852.nnic	chr18	-	747	3	NNC	ENSG00000175387.16	novel	34626	11	NA	NA	-7	-13150	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	13	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGCAGCAAAACTGGGTAG	-47927564	True	NA	NA	False	AATAAA	-33	NA	47930369	47883624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_-_47883965_47896520_47896810_47930251
transcript_65853.known	chr18	-	1971	9	FSM	ENSG00000175387.16	ENST00000586040.5	1971	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	102.282696483814	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTGACCTTAATGTGTTC	NA	False	NA	-20	True	AATAAA	-36	NA	47896811	47841224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_47841951_47845339_47845485_47845662_47845801_47848474_47848688_47851273_47851328_47865058_47865134_47868322_47868458_47869242_47869437_47896520
transcript_65855.known	chr18	+	5765	12	FSM	ENSG00000134030.14	ENST00000256413.8	5765	12	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	6.20849857416868	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCAGAGTCTGTGCTCTT	48538988	True	NA	NA	False	AATAAA	-21	NA	48539030	48863217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_48539313_48619537_48619746_48636613_48636686_48663751_48663826_48664446_48664552_48670668_48670745_48711618_48711696_48757918_48758406_48761389_48761690_48817220_48817377_48857587_48857642_48859343
transcript_65857.known	chr18	-	5049	17	FSM	ENSG00000141627.14	ENST00000269445.10	5049	17	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_11	17.1472255408856	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATACTTGCATTAATTTTG	NA	False	NA	NA	False	AATAAA	-20	NA	49460802	49041473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49044205_49097401_49097516_49118743_49118927_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_65861.nnic	chr18	-	2450	16	NIC	ENSG00000141627.14	novel	5049	17	NA	NA	0	2	combination_of_known_splicesites	FALSE	canonical	2	7	junction_2	45.1921330420339	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGCAGTTTTATTTCGAAG	-49456647	True	NA	-22	True	AATAAA	-21	NA	49460714	49043801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_49044205_49097401_49097516_49163684_49163788_49257009_49257105_49258379_49258494_49272177_49272304_49281996_49282176_49286433_49286617_49331863_49332007_49333727_49333854_49363160_49363234_49378566_49378701_49379664_49379759_49391592_49391646_49430254_49430448_49460397
transcript_6587.known	chr1	+	2423	12	FSM	ENSG00000079739.17	ENST00000650546.1	2423	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	265.876874505276	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATATTTTGGGATAATAAA	63586256	True	NA	NA	False	NA	NA	NA	63593410	63660209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63593735_63629424_63629588_63629941_63630089_63631656_63631783_63634828_63635020_63636233_63636389_63638684_63638801_63648516_63648653_63651668_63651853_63654331_63654467_63654989_63655112_63659585
transcript_6588.known	chr1	+	5362	8	ISM	ENSG00000185483.13	ENST00000371079.6	5858	9	235286	6	234013	-6	3prime_fragment	FALSE	canonical	3	205	junction_6	253.380974754118	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAAATATTATTTCCTGAA	NA	False	NA	9	True	ATTAAA	-42	NA	64009302	64181492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_64009377_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404_64142651_64158980_64159193_64177427
transcript_65884.known	chr18	-	856	8	FSM	ENSG00000265681.8	ENST00000618613.5	856	8	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	6439.05065889026	29778	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315662	True	NA	-21	True	AATAAA	-21	NA	49492409	49488480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492257
transcript_65885.known	chr18	-	758	8	FSM	ENSG00000265681.8	ENST00000583637.5	758	8	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_7	6435.06843120458	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CTGAAGAAACAAAAACTTAT	-49315652	True	NA	-92	True	AAGAAA	-40	NA	49492399	49488551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492274
transcript_6589.known	chr1	+	2305	7	FSM	ENSG00000185483.13	ENST00000371080.5	2305	7	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_6	188.328982250623	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTGAAACCTGGAGTT	63763935	True	NA	NA	False	AAAAAG	-19	NA	63774021	64143385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_63774509_64009304_64009377_64049690_64049979_64050685_64050717_64137368_64137497_64140108_64140427_64142404
transcript_65912.known	chr18	-	614	7	FSM	ENSG00000265681.8	ENST00000580261.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	3	8803	junction_6	2523.35183282519	203445	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49315718	True	NA	-21	True	AATAAA	-21	NA	49492465	49488480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492457
transcript_65929.known	chr18	-	650	7	FSM	ENSG00000265681.8	ENST00000615760.4	650	7	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_6	6959.00408144409	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATGGTCGGATTAACCCAT	-49315681	True	NA	NA	False	NA	NA	NA	49492428	49489470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492274
transcript_6593.known	chr1	+	6887	6	FSM	ENSG00000162433.15	ENST00000545314.5	6887	6	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	439.731281580012	577	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147463	False	NA	39	True	AATAAA	-27	NA	65147548	65232145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65147666_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_65942.known	chr18	-	584	6	FSM	ENSG00000265681.8	ENST00000581373.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	5487.52845641824	6162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315732	True	NA	-24	True	AATAAA	-18	NA	49492479	49488483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491531_49491585_49492457
transcript_65969.known	chr18	-	5548	3	FSM	ENSG00000177576.12	ENST00000318240.8	5548	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_2	102.5	491	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGAGTTTTTAATTTA	-49310487	False	176747	-1	True	AATAAA	-30	NA	49487234	49477242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49482411_49483583_49483772_49487042
transcript_65971.known	chr18	-	747	8	FSM	ENSG00000265681.8	ENST00000618619.4	747	8	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_6	6366.89601111299	36816	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAGTGTCCTTACAAGAT	-49315735	True	NA	7	True	ATTAAA	-39	NA	49492482	49488452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491745_49491834_49492457
transcript_65972.known	chr18	-	684	7	FSM	ENSG00000265681.8	ENST00000578532.5	684	7	0	0	0	0	multi-exon	FALSE	canonical	3	1654	junction_6	4884.49852993006	819	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGAAGAAACTGAAGAAACA	-49315685	True	NA	-101	True	AAGAAA	-31	NA	49492432	49488560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49492274
transcript_65973.known	chr18	-	1440	7	FSM	ENSG00000215472.10	ENST00000584895.5	1440	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	6920.04049642935	1330	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACATTCAGTTTAACTG	-49314839	False	NA	23	True	TATAAA	-42	NA	49491586	49481680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49482411_49483583_49483772_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_65974.known	chr18	-	859	6	FSM	ENSG00000265681.8	ENST00000579408.5	859	6	0	0	0	0	multi-exon	FALSE	canonical	3	10533	junction_1	1753.85844354669	59209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTTGGTTGTCTTTATT	-49315093	False	NA	-24	True	AATAAA	-18	NA	49491840	49488483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531
transcript_65975.known	chr18	-	705	6	FSM	ENSG00000265681.8	ENST00000580210.5	705	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	5759.97620133972	907	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCAGCATTAAAATAAATGT	-49315067	False	NA	-58	True	AGTAAA	-1	NA	49491814	49488517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491625
transcript_65976.known	chr18	-	523	4	FSM	ENSG00000265681.8	ENST00000584364.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	10533	junction_1	2084.35425651847	6411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGGTTGTCTTTATTAGT	-49314191	False	NA	-21	True	AATAAA	-21	NA	49490938	49488480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49488567_49489358_49489551_49490453_49490553_49490792
transcript_65977.known	chr18	-	795	6	FSM	ENSG00000265681.8	ENST00000617346.4	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	475	junction_5	5775.55508674274	1171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAATAAGTAGTTGCTCGG	-49315736	True	NA	NA	False	AAAAAG	-1	NA	49492483	49489358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492457
transcript_65978.known	chr18	-	827	6	FSM	ENSG00000265681.8	ENST00000580387.5	827	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_5	5926.73837451933	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGCTCATGGTCGGATTA	-49315686	True	NA	NA	False	NA	NA	NA	49492433	49489476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491834_49492257
transcript_65979.known	chr18	-	576	7	FSM	ENSG00000265681.8	ENST00000583036.5	576	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_5	6863.16257072658	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATGAGCTCTCCCTGCCA	-49315761	True	NA	NA	False	NA	NA	NA	49492508	49489451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49489551_49490453_49490553_49490792_49490928_49491404_49491446_49491531_49491585_49491735_49491834_49492457
transcript_65980.known	chr18	-	481	4	FSM	ENSG00000265681.8	ENST00000578528.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	6995.75877863787	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTACCATTCCGACGTTA	-49315683	True	NA	NA	False	NA	NA	NA	49492430	49490840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49490928_49491404_49491446_49491531_49491585_49492130
transcript_65981.known	chr18	+	10418	10	FSM	ENSG00000101670.12	ENST00000261292.9	10418	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.87174399629335	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTACCATATTACAT	49561601	True	NA	8	True	AATAAA	-21	NA	49562056	49599185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414_49581658_49582361_49582483_49583555_49583775_49586745_49586851_49590500
transcript_65983.known	chr18	+	1453	6	FSM	ENSG00000101670.12	ENST00000580036.5	1453	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	3.61109401705356	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGTGGCTATCAGTCCA	49561631	True	NA	NA	False	AATAAA	-18	NA	49562086	49581852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_49562406_49565316_49565499_49567441_49567622_49569436_49569549_49575368_49575591_49581414
transcript_65987.known	chr18	-	1693	9	FSM	ENSG00000167306.20	ENST00000592688.1	1693	9	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_7	8.46223227050641	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGCTCAGAATAAAAACAC	-49849832	True	NA	-34	True	NA	NA	NA	49849846	49826289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49826624_49835343_49835425_49836710_49836886_49837516_49837803_49839143_49839295_49841364_49841455_49843240_49843393_49847145_49847290_49849566
transcript_6599.known	chr1	+	6998	6	FSM	ENSG00000162433.15	ENST00000395334.6	6998	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	468.754775975669	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65147722	False	NA	39	True	AATAAA	-27	NA	65147829	65232145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65148058_65148277_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_65996.known	chr18	-	2926	10	FSM	ENSG00000167315.18	ENST00000285093.15	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	630	junction_9	123.546662349809	485	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTTTTTACATATTCT	-49808002	False	5531	1	True	AATAAA	-19	NA	49813533	49782163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813468
transcript_65998.nic	chr18	-	1794	10	NIC	ENSG00000167315.18	novel	1657	10	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	45	junction_9	294.48335172713	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	-49808422	True	NA	-10	True	AATAAA	-18	NA	49813953	49783502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813681
transcript_65999.nic	chr18	-	1749	10	NIC	ENSG00000167315.18	novel	1840	10	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_9	308.24845678626	537	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATATTTTCCTGTCATTT	NA	False	NA	-10	True	AATAAA	-18	NA	49813958	49783502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_66.known	ERCC-00137	+	521	1	FSM	ERCC-00137A	DQ855000	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00137_+_0_500
transcript_66016.known	chr18	+	421	1	FSM	ENSG00000267322.3	ENST00000615535.1	421	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCAAGCAGGAGGCGGCCGC	49768605	True	NA	16	True	NA	NA	NA	49814022	49814443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_49814000_49814400
transcript_66017.known	chr18	-	1657	10	FSM	ENSG00000167315.18	ENST00000587994.5	1657	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	266.160770128799	739	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAATATTTTCCTGTCAT	-49808422	True	NA	-12	True	AATAAA	-16	NA	49813953	49783504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49783932_49785196_49785352_49787290_49787362_49791469_49791600_49792151_49792328_49794279_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813816
transcript_66018.known	chr18	-	727	5	FSM	ENSG00000167315.18	ENST00000586485.5	727	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	386.732708081434	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAAATATGCCCTGCAGTC	-49808406	True	NA	NA	False	AAAACA	-23	NA	49813937	49794319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_49794428_49795764_49795882_49797465_49797595_49802686_49802854_49813731
transcript_66019.nic	chr18	-	807	2	ISM	ENSG00000172361.6	ENST00000398545.5	1824	8	-119	34499	-119	-34499	5prime_fragment	FALSE	canonical	2	4	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGCTTAGTGGGTCAT	-50266600	False	NA	NA	False	AATAAA	-14	NA	50266614	50261691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_50262220_50266335
transcript_66025.known	chr18	-	3009	17	FSM	ENSG00000141644.18	ENST00000269468.10	3009	17	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	53.0312039628557	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281513	False	7686	-3	True	TTTAAA	-31	NA	50281523	50268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50269819_50271468_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_66030.known	chr18	-	2473	17	FSM	ENSG00000141644.18	ENST00000457839.6	2473	17	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_5	31.4759332665451	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGCTATTTGGTGTGTTC	-50281456	False	7686	-28	True	AATAAA	-11	NA	50281466	50271049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_66036.known	chr18	-	4905	16	FSM	ENSG00000141644.18	ENST00000591416.5	4905	16	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_8	45.368809648137	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACATGCTTAGTGTTTCT	-50281759	False	7686	-3	True	TTTAAA	-31	NA	50281769	50268845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274185_50274354_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_66037.nic	chr18	-	2614	16	NIC	ENSG00000141644.18	novel	2473	17	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	77	junction_5	35.143262354097	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTGTGTTCCTCTGTGG	-50281757	False	7686	-20	True	AATAAA	-19	NA	50281767	50271041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275369_50275445_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_66041.known	chr18	-	1845	15	FSM	ENSG00000141644.18	ENST00000398493.5	1845	15	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	49.1060908978235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATATTTGCAGACTGGCT	-50281490	False	7686	NA	False	NA	NA	NA	50281500	50271468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50271541_50272676_50272739_50272823_50272956_50273333_50273472_50273563_50273864_50274976_50275046_50275128_50275246_50275599_50275729_50275834_50275982_50276377_50276419_50276661_50276745_50276831_50276999_50277089_50277205_50279882_50280018_50281362
transcript_66044.known	chr18	-	385	2	FSM	ENSG00000141644.18	ENST00000589758.1	385	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTCACCTACTTAATAAA	-50281465	False	7686	NA	False	TTTAAA	-44	NA	50281475	50279745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50280018_50281362
transcript_66047.known	chr18	-	2242	15	FSM	ENSG00000154832.16	ENST00000589940.5	2242	15	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	82.8145210573555	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50279965	True	NA	-15	True	AATAAA	-17	NA	50287651	50282346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283325_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_66050.known	chr18	-	2320	15	FSM	ENSG00000154832.16	ENST00000285106.11	2320	15	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_9	38.3762921074766	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCTGTCTCCACATTGC	-50280006	True	NA	-15	True	AATAAA	-17	NA	50287692	50282346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285324_50285352_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_66055.known	chr18	-	2423	14	FSM	ENSG00000154832.16	ENST00000673786.1	2423	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	82.079193970459	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTGAAGAAACCAAGGA	NA	False	NA	-32	True	NA	NA	NA	50287839	50282363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50282740_50282853_50283007_50283264_50283362_50283514_50283565_50283704_50283816_50283893_50284102_50284377_50284563_50284731_50284840_50285001_50285248_50285748_50285929_50286021_50286258_50286538_50286640_50286739_50286859_50287586
transcript_66072.nnic	chr18	+	2533	8	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	45.0170035902535	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50375000	50394168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098_50392849_50393209
transcript_66073.known	chr18	+	979	7	FSM	ENSG00000154839.10	ENST00000398452.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	28.487814158962	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCCTTGTGAACTTTTGAA	NA	False	NA	NA	False	NA	NA	NA	50375039	50392247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50375240_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_66075.known	chr18	+	2849	7	FSM	ENSG00000154839.10	ENST00000285116.8	2849	7	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	20.0783188760635	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	50374224	True	NA	14	True	AATAAA	-14	NA	50375045	50394168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382227_50385215_50385354_50391123_50391294_50392098
transcript_66080.nnic	chr18	+	1446	5	NNC	ENSG00000154839.10	novel	2849	7	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	47.2995771651291	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGCATTTCCCTGAGTT	NA	False	NA	14	True	AATAAA	-14	NA	50375000	50394168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_50375195_50375819_50375919_50380125_50380251_50382128_50382192_50393203
transcript_66084.known	chr18	-	1125	7	FSM	ENSG00000134042.14	ENST00000436348.6	1125	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.21335164821342	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTAGACTGCTTTCACTTA	NA	False	NA	NA	False	AGTAAA	-2	NA	50820064	50799149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_50799391_50800035_50800144_50801348_50801505_50805153_50805337_50806703_50806851_50819580_50819703_50819896
transcript_66085.known	chr18	+	9031	16	FSM	ENSG00000082212.13	ENST00000321341.11	9031	16	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_7	24.2224872564501	144	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTATGATCTTGTTTTT	50873937	True	NA	7	True	AGTAAA	-19	NA	50879117	50954257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50879309_50895808_50895929_50908062_50908197_50912800_50912951_50916167_50916244_50917346_50917509_50918109_50918214_50920455_50920566_50920660_50920759_50921073_50921188_50924097_50924213_50925755_50925899_50932257_50932361_50939569_50939641_50940287_50940387_50947016
transcript_66090.known	chr18	+	2211	4	FSM	ENSG00000141642.9	ENST00000269466.8	2211	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	6.16441400296898	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTAAAACATGCTCC	50967415	True	NA	5	True	AATAAA	-18	NA	50968039	50988121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50968115_50974396_50974562_50984095_50984564_50986618
transcript_66091.known	chr18	+	694	4	FSM	ENSG00000141642.9	ENST00000588577.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	19.4821855949366	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCAGTTGCCTTGGCCA	50967366	True	NA	NA	False	NA	NA	NA	50967990	50986946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50968115_50974396_50974562_50984486_50984564_50986618
transcript_66094.nnic	chr18	-	521	3	Antisense	novelGene_ENSG00000141646.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAGGGTGGGCTGGAGAC	-51030023	True	NA	NA	False	AGTAAA	-16	NA	51030096	51019405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr18_-_51019626_51019839_51019962_51029917
transcript_66096.known	chr18	+	1505	2	FSM	ENSG00000141642.9	ENST00000586966.2	1505	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATTAGTTGAGTAGTGAG	50967420	True	NA	NA	False	AATAAA	-17	NA	50968044	50969866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_50968115_50968431
transcript_66098.known	chr18	+	3188	2	FSM	ENSG00000227115.9	ENST00000578152.5	3188	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTCATTGCATGGACATAT	51392026	True	NA	NA	False	AATAAA	-21	NA	51392041	51468378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_51392258_51465406
transcript_66099.known	chr18	+	588	2	FSM	ENSG00000227115.9	ENST00000658078.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGAGGTTTTATTTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	51392017	51465710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_51392258_51465362
transcript_66103.known	chr18	+	621	2	FSM	ENSG00000187323.12	ENST00000578080.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTTATATGTTTACTAGTC	NA	False	NA	NA	False	AATAAA	-18	NA	52752059	52759092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_52752375_52758786
transcript_66110.known	chr18	+	6020	10	FSM	ENSG00000101751.11	ENST00000579534.6	6020	10	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	40.4340646021015	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAAGAAGTCCAGAGTTTTC	54265321	True	NA	9	True	AATAAA	-14	NA	54269516	54298234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_66111.nic	chr18	+	1563	10	NIC	ENSG00000101751.11	novel	6020	10	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_9	141.873530883784	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGATTGGCTTTTTCATTC	54265307	True	NA	12	True	AATAAA	-26	NA	54269502	54321266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54320272_54320393_54321065
transcript_66117.nnic	chr18	+	1513	9	NNC	ENSG00000101751.11	novel	6020	10	NA	NA	-14	-9907	at_least_one_novel_splicesite	FALSE	canonical	1	7	junction_8	118.010592744889	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGCTTCTGCTTCACTAA	54265307	True	NA	NA	False	AATAAA	-22	NA	54269502	54311359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_54269662_54271359_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54311088
transcript_66119.nic	chr18	+	2366	9	NIC	ENSG00000101751.11	novel	2705	9	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_1	111.982141433355	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	54265339	True	NA	16	True	AATAAA	-18	NA	54269534	54294724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_54269662_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_6612.known	chr1	+	6845	5	FSM	ENSG00000162433.15	ENST00000327299.8	6845	5	0	0	0	0	multi-exon	FALSE	canonical	3	754	junction_3	246.432926980142	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTTGTTTGTATAGCTT	65131610	True	NA	39	True	AATAAA	-27	NA	65148202	65232145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65148553_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_66123.known	chr18	+	2705	9	FSM	ENSG00000101751.11	ENST00000579434.5	2705	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	116.548005130933	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAGAATATTTTTCATGAA	54265371	True	NA	16	True	AATAAA	-18	NA	54269566	54294724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54270033_54273925_54274091_54277702_54277856_54280666_54280904_54282836_54283016_54283921_54284014_54287280_54287412_54291832_54292039_54293648
transcript_66136.known	chr18	+	585	4	FSM	ENSG00000101751.11	ENST00000577612.5	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	154.62930583244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACCAAATCAACAAACAGTC	54265355	True	NA	NA	False	AATAAA	-32	NA	54269550	54280822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54269662_54273925_54274091_54277702_54277856_54280666
transcript_66138.known	chr18	+	2536	5	FSM	ENSG00000101751.11	ENST00000577971.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_4	8.4372685153431	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAATTAGGAATTTCA	54265396	True	NA	NA	False	NA	NA	NA	54269591	54282923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54271486_54273925_54274091_54277702_54277856_54280666_54280904_54282836
transcript_66144.known	chr18	+	2096	8	FSM	ENSG00000166845.15	ENST00000648616.1	2096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	69.6047148297485	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCAAGAGAACCTCCTCAT	54358469	False	NA	69	True	NA	NA	NA	54358481	54378845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54361892_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_66146.known	chr18	+	5237	8	FSM	ENSG00000166845.15	ENST00000300091.5	5237	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	49.342617254773	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGAGGTTCTGGAAATC	54358572	False	NA	24	True	TATAAA	-38	NA	54358584	54382032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54361949_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_66147.known	chr18	+	4056	8	FSM	ENSG00000166845.15	ENST00000382911.8	4056	8	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_3	37.6406206979988	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAAAATGTTAAATAGAAAA	54358572	False	NA	NA	False	NA	NA	NA	54358584	54380368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_54358871_54360526_54360856_54361642_54362432_54362770_54362922_54365718_54365822_54372465_54372598_54374213_54374285_54378173
transcript_66153.nic	chr18	-	374	3	ISM	ENSG00000174448.9	ENST00000584040.2	788	6	-13	18518	-12	-1716	5prime_fragment	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGATCCTGGAAGTCT	NA	False	NA	NA	False	AATAAA	-14	NA	54357873	54355642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_54355851_54356360_54356445_54357791
transcript_66154.nic	chr18	+	1521	2	ISM	ENSG00000166845.15	ENST00000648616.1	2096	8	-579	17766	-3	-17172	5prime_fragment	FALSE	canonical	3	161	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGGAAAATGCAGTTGTT	54347191	True	NA	NA	False	AATAAA	-17	NA	54357902	54361079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_54358871_54360526
transcript_66155.nic	chr18	+	715	3	ISM	ENSG00000041353.10	ENST00000586594.1	597	4	-71	8493	-67	-4735	5prime_fragment	FALSE	canonical	1	3	junction_1	0.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTAGCACTGTGCAGT	NA	False	NA	NA	False	AATAAA	-25	NA	54828409	54879620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_54828701_54877566_54877739_54879368
transcript_66159.known	chr18	-	8041	20	FSM	ENSG00000196628.20	ENST00000354452.8	8041	20	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_3	22.3526260022548	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTGGTTCATTTTCAAA	-55582620	True	NA	NA	False	ATTAAA	-17	NA	55588192	55222184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55588037
transcript_66161.known	chr18	-	3789	20	FSM	ENSG00000196628.20	ENST00000629387.2	3789	20	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_19	38.6836734656597	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAAAAACAAGTAAAGTT	-55588783	True	NA	22	True	AATACA	-29	NA	55589807	55226792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_66162.nic	chr18	-	2766	20	NIC	ENSG00000196628.20	novel	3789	20	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_19	43.5377379527093	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAGTGCAACTT	NA	False	NA	28	True	AAAACA	-16	NA	55589844	55227840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55587044_55587137_55589296
transcript_66163.known	chr18	-	2767	19	FSM	ENSG00000196628.20	ENST00000537578.5	2767	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_18	42.2998190463981	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGACTGAACGGCAATCTT	NA	False	NA	NA	False	NA	NA	NA	55589836	55227751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55589296
transcript_66164.known	chr18	-	2572	19	FSM	ENSG00000196628.20	ENST00000540999.5	2572	19	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_18	47.3394623053328	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAATATAATTAA	-55585081	False	5572	NA	False	NA	NA	NA	55586105	55227689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55350358_55350409_55350873_55351004_55403453_55403519_55461018_55461116_55464075_55464138_55585279_55585353_55585810
transcript_66166.known	chr18	-	2372	13	FSM	ENSG00000196628.20	ENST00000457482.7	2372	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	49.3903808673533	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATATAATTAATTTGTAA	NA	False	NA	NA	False	NA	NA	NA	55322222	55227682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232508_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_66167.known	chr18	-	3163	13	FSM	ENSG00000196628.20	ENST00000570287.6	3163	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_12	54.8275072892755	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGCCAATATTCAATC	NA	False	NA	NA	False	ACTAAA	-35	NA	55321986	55226643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55228031_55228220_55228362_55228846_55229077_55232520_55232672_55234547_55234684_55254496_55254701_55257314_55257392_55259948_55260028_55261465_55261534_55269830_55269964_55275618_55275753_55279550_55279657_55321669
transcript_66169.known	chr18	-	2115	4	FSM	ENSG00000196628.20	ENST00000637941.1	2115	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	67.2573829074218	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGTAAAAGGAAACTATTAA	-55588722	True	NA	NA	False	ATTAAA	-25	NA	55589746	55550260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_55551761_55585279_55585353_55587044_55587137_55589296
transcript_66179.nnic	chr18	+	645	3	NNC	ENSG00000267284.2	novel	1719	9	NA	NA	-10	-153668	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGAGGTTCTCTCTTCTA	55589860	True	NA	NA	False	AATAAA	-20	NA	55589893	55605454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_55589976_55597079_55597164_55604975
transcript_6618.known	chr1	+	867	5	FSM	ENSG00000162433.15	ENST00000479060.1	867	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	552.442078411846	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTACAGTGTGGATTTCAAA	65165882	True	NA	NA	False	AAGAAA	-4	NA	65165931	65226429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65166020_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_66190.nnic	chr18	+	1135	2	NNC	ENSG00000267284.2	novel	555	2	NA	NA	-9	-4404	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTGTGGAATGGATTTT	55720590	True	NA	NA	False	NA	NA	NA	55721053	55754718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_55721535_55754064
transcript_66193.nic	chr18	+	566	2	ISM	ENSG00000267284.2	ENST00000587346.1	565	5	-148	23363	-70	2459	5prime_fragment	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTTAGGGTTTTCATTCT	55720784	False	NA	NA	False	AATAAA	-33	NA	55721247	55761581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_55721535_55761302
transcript_66204.nnic	chr18	+	870	3	Fusion	ENSG00000267327.2_ENSG00000267057.6	novel	518	3	NA	NA	-117	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	65	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAAGCATATGCACAACTTA	NA	False	NA	5	True	AATAAA	-20	NA	55892920	56096310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_55893443_55917204_55917317_56096074
transcript_66205.known	chr18	+	518	3	FSM	ENSG00000267327.2	ENST00000589440.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	1	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCAATTTCTCTGCATC	55892360	True	NA	NA	False	NA	NA	NA	55893037	56023462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_55893443_56017727_56017780_56023401
transcript_66214.nnic	chr18	+	824	3	Fusion	ENSG00000267327.2_ENSG00000267057.6	novel	620	4	NA	NA	-81	0	multi-exon	TRUE	canonical	2	5	junction_2	1.5	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATATGCACAACTTATTTA	NA	False	NA	9	True	AATAAA	-24	NA	55892956	56096314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_55893443_56050079_56050178_56096074
transcript_66219.known	chr18	-	1339	10	FSM	ENSG00000091164.13	ENST00000590954.5	1339	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	383.348115657007	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTCTTTCTAAATCAG	-56651066	True	NA	-1	True	AATAAA	-25	NA	56651128	56602821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342_56638506_56647448_56647536_56651016
transcript_66229.known	chr18	-	6840	8	FSM	ENSG00000091164.13	ENST00000217515.11	6840	8	0	0	0	0	multi-exon	FALSE	canonical	3	825	junction_4	81.3611249495803	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTCTCTTGTATTTTGT	-56628602	True	NA	NA	False	ATTAAA	-16	NA	56638592	56597208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_56603057_56610992_56611098_56614423_56614597_56616244_56616315_56618003_56618127_56624287_56624462_56626360_56626458_56638342
transcript_66234.nic	chr18	-	898	3	ISM	ENSG00000258609.3	ENST00000553704.3	2604	4	-38	2993	-38	337	5prime_fragment	FALSE	canonical	3	24	junction_1	14.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAAGTTGTGGACTCA	-57071524	True	NA	NA	False	CATAAA	-15	NA	57072157	57057550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_57058001_57069809_57070004_57071903
transcript_66235.nic	chr18	-	574	3	NIC	ENSG00000258609.3	novel	544	4	NA	NA	-38	-2503	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	25.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAGAAAAATCACGTAATCA	-57071524	True	NA	NA	False	AAGAAA	-7	NA	57072157	57060390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_57060517_57069809_57070004_57071903
transcript_66236.known	chr18	-	2604	4	FSM	ENSG00000258609.3	ENST00000553704.3	2604	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	19.7371617907833	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTTCTAGCAATTCTATT	-57071486	True	NA	-1	True	AATAAA	-15	NA	57072119	57054557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_57056251_57057499_57058001_57069809_57070004_57071903
transcript_66237.known	chr18	+	10087	4	FSM	ENSG00000177511.6	ENST00000324000.4	10087	4	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	2.16024689946929	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTGGTTGTCTGTCAC	57352455	True	NA	24	True	AATAAA	-24	NA	57352556	57368931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57353026_57354401_57354525_57356912_57357471_57359994
transcript_66241.known	chr18	-	7689	11	FSM	ENSG00000066926.13	ENST00000262093.11	7689	11	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_4	12.4755761390006	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATATGCATAGACTGTT	-57583890	True	NA	NA	False	AGTAAA	-29	NA	57586702	57544376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_57550847_57551314_57551375_57554259_57554425_57554844_57554953_57559144_57559244_57562873_57562981_57566446_57566582_57571391_57571541_57573245_57573366_57580072_57580200_57586553
transcript_6625.known	chr1	+	928	5	FSM	ENSG00000162433.15	ENST00000474968.5	928	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	476.860238958964	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATTTCAAATGGTGTGTAA	65146967	True	NA	NA	False	AAGAAA	-14	NA	65149001	65226439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65149141_65190709_65190830_65218753_65218927_65224751_65224871_65226062
transcript_66251.known	chr18	-	2762	14	FSM	ENSG00000134440.12	ENST00000256854.10	2762	14	0	0	0	0	multi-exon	FALSE	canonical	3	1231	junction_13	126.674722052589	1691	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCTTAATTTTCTT	-57593581	True	NA	-30	True	AATAAA	-20	NA	57621836	57600655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_57601784_57602354_57602487_57602811_57602944_57605856_57605971_57606615_57606752_57607133_57607334_57607443_57607666_57609356_57609444_57611636_57611708_57613601_57613681_57615640_57615731_57615816_57615976_57620568_57620652_57621707
transcript_66286.nnic	chr18	+	325	3	NNC	ENSG00000267040.7	novel	1106	3	NA	NA	-21	69378	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTCGTTTTTGCCTCAA	57629437	True	NA	NA	False	AATAAA	-45	NA	57630328	57738674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_57630519_57641558_57641590_57738570
transcript_66287.nnic	chr18	+	391	3	NNC	ENSG00000267040.7	novel	1106	3	NA	NA	-21	69362	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	21	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCCATAAAACAGTAAAGCCA	57629437	True	NA	NA	False	AATAAA	-33	NA	57630328	57738658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_57630519_57641558_57641634_57738532
transcript_66288.known	chr18	+	1954	3	FSM	ENSG00000267040.7	ENST00000592201.1	1954	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	7	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATTAAGGCTAAAACTCA	57629458	True	NA	NA	False	AATAAA	-44	NA	57630349	57669296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57630519_57641558_57642053_57668005
transcript_66291.nnic	chr18	+	1269	3	Fusion	ENSG00000267787.7_ENSG00000267040.7	novel	1106	3	NA	NA	-21	-2309	multi-exon	FALSE	canonical	3	18	junction_2	12	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATCTTTTCCACTAAATT	57629437	True	NA	6	True	ATTAAA	-21	NA	57630328	57735735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr18_+_57630519_57641558_57642053_57735150
transcript_66294.known	chr18	+	1106	3	FSM	ENSG00000267040.7	ENST00000591854.5	1106	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	21	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTGCTATATTATCAAACA	57629410	True	NA	NA	False	AATAAA	-1	NA	57630301	57667636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57630519_57641558_57642053_57667241
transcript_66295.nnic	chr18	+	394	2	FSM	ENSG00000267040.7	ENST00000689794.1	439	2	41	4	-12	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAACTCTCGTGCTTTGGCA	57629446	True	NA	NA	False	ATTAAA	-35	NA	57630337	57631783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_57630519_57631570
transcript_66300.known	chr18	+	649	3	FSM	ENSG00000074657.14	ENST00000592452.5	649	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	116	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACACTGAAAGACTCGACAT	58862745	False	NA	NA	False	AGTAAA	-45	NA	58864820	58918643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_58864987_58865469_58865580_58918270
transcript_6631.nnic	chr1	+	2212	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	22	-1742	22	1742	multi-exon	FALSE	canonical	3	23	junction_2	103	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAACTTTAAAATTTTTT	65417605	True	NA	6	True	AATAAA	-21	NA	65420608	65433806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_66314.known	chr18	+	791	6	FSM	ENSG00000166562.9	ENST00000587834.6	791	6	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.2161255371915	5817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131203	True	NA	15	True	AATAAA	-16	NA	59139883	59158832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59157607_59157666_59158631
transcript_66315.known	chr18	+	718	5	FSM	ENSG00000166562.9	ENST00000588875.2	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	327.070615464	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131218	True	NA	15	True	AATAAA	-16	NA	59139898	59158832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687_59155808_59158631
transcript_66316.known	chr18	+	727	6	FSM	ENSG00000166562.9	ENST00000299714.7	727	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	324.297024346509	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGTTTTCTTTTGTGGAC	59131194	True	NA	15	True	AATAAA	-16	NA	59139874	59158832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152613_59155687_59155808_59157607_59157666_59158631
transcript_66317.known	chr18	+	1088	3	FSM	ENSG00000166562.9	ENST00000585864.1	1088	3	0	0	0	0	multi-exon	FALSE	canonical	3	826	junction_1	8.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTATTCATTTACCTTTATG	59131203	True	NA	NA	False	AGTAAA	-23	NA	59139883	59153361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535
transcript_66318.known	chr18	+	2054	4	FSM	ENSG00000166562.9	ENST00000509791.7	2054	4	0	0	0	0	multi-exon	FALSE	canonical	3	757	junction_3	37.1872140511882	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGCCTATTCTTTTTGTAC	59131185	True	NA	NA	False	AATAAA	-17	NA	59139865	59157311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59140036_59149512_59149623_59152535_59152686_59155687
transcript_66319.known	chr18	+	858	3	FSM	ENSG00000134443.10	ENST00000256857.7	858	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCAGGCTGTTCTCTTATT	NA	False	NA	NA	False	AATAAA	-22	NA	59220157	59230771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59220405_59225491_59225735_59230403
transcript_6632.nnic	chr1	+	475	3	Fusion	ENSG00000213625.9_ENSG00000237852.1	novel	492	3	NA	NA	-4	0	multi-exon	FALSE	canonical	0	0	junction_2	114.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTTTGAAGTGGTTGA	65417660	True	NA	NA	False	AATAAA	-15	NA	65420663	65494188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_65420741_65425302_65425379_65493866
transcript_66320.known	chr18	-	4824	13	FSM	ENSG00000074695.6	ENST00000251047.6	4824	13	0	0	0	0	multi-exon	TRUE	canonical	3	473	junction_5	60.936898145176	2114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTTTCCTTCATTGA	-59349716	True	NA	74	True	AATAAA	-17	NA	59359265	59327822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_59331130_59331417_59331540_59333090_59333245_59338556_59338628_59338759_59338954_59345918_59346052_59347512_59347572_59349112_59349237_59353201_59353302_59354518_59354581_59355312_59355421_59355503_59355659_59359030
transcript_66321.known	chr18	-	6271	11	FSM	ENSG00000183287.14	ENST00000439986.9	6271	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_8	6.48382603097893	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGCTCTACTGTGTTTTG	-59697115	True	NA	-2	True	NA	NA	NA	59697423	59430938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_59436142_59438110_59438147_59439542_59439579_59439676_59439817_59447982_59448104_59454850_59454952_59466738_59466892_59469472_59469608_59480185_59480239_59696628_59696710_59697211
transcript_66329.known	chr18	+	1262	3	FSM	ENSG00000141682.12	ENST00000269518.9	1262	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAGAAGTTAATTTTT	59875653	True	NA	-7	True	AATAAA	-39	NA	59900015	59903537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59900236_59900427_59900579_59902646
transcript_66331.known	chr18	+	1899	2	FSM	ENSG00000141682.12	ENST00000316660.7	1899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1321	junction_1	0	3198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCTGTGTGTTAATTTT	59875633	True	NA	25	True	ATTAAA	-14	NA	59899995	59904305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59900236_59902646
transcript_66332.known	chr18	+	804	3	FSM	ENSG00000141682.12	ENST00000590596.1	804	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAACCACTTTGTTTATTT	59875673	True	NA	-64	True	NA	NA	NA	59900035	59902963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_59900236_59900427_59900715_59902646
transcript_66333.known	chr18	-	1714	1	FSM	ENSG00000166603.5	ENST00000299766.5	1714	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTCGTGTTATTCATAAG	NA	False	NA	NA	False	ATTAAA	-15	NA	60372775	60371061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_60371100_60372800
transcript_66338.known	chr18	-	653	2	FSM	ENSG00000267279.3	ENST00000586949.1	653	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	162	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCAACTGCTTATTTCC	-61606779	True	NA	2	True	AATAAA	-18	NA	61606916	61606067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_61606655_61606850
transcript_66340.known	chr18	-	4456	30	FSM	ENSG00000197563.11	ENST00000400334.7	4456	30	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_28	30.7661966856773	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTACTTTATGGTATACCAG	-62183469	True	NA	74	True	NA	NA	NA	62187038	62044548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_66341.known	chr18	-	6045	29	FSM	ENSG00000197563.11	ENST00000640876.1	6045	29	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_28	15.1195912913123	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTCTGCCTCCTGGGCTCA	-62183487	True	NA	NA	False	NA	NA	NA	62187056	62042851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62045980_62072672_62072726_62074778_62074822_62082672_62082747_62084530_62084607_62085208_62085265_62088755_62088843_62090475_62090579_62095847_62095951_62101074_62101184_62102793_62102903_62105542_62105635_62106788_62106882_62106985_62107086_62109833_62109974_62113133_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62186843
transcript_66346.known	chr18	-	2367	15	FSM	ENSG00000197563.11	ENST00000638329.1	2367	15	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_13	41.9139667920479	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAAATTAAAAAAATCTCT	-62183480	True	NA	NA	False	NA	NA	NA	62187049	62112564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_62113317_62114560_62114640_62138242_62138299_62138982_62139076_62140419_62140480_62143305_62143347_62145908_62146026_62146970_62147102_62148213_62148339_62154544_62154652_62157128_62157228_62157686_62157809_62161132_62161386_62163530_62163657_62186843
transcript_6635.known	chr1	+	4541	4	FSM	ENSG00000213625.9	ENST00000371065.9	4541	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	22.647050335284	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCTTTTATGTACATT	65417664	True	NA	NA	False	AATAAA	-21	NA	65420667	65436007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65429861_65430049_65431802
transcript_66350.nic	chr18	+	1821	10	ISM	ENSG00000134444.15	ENST00000587725.5	3268	22	-27	43185	6	-3021	5prime_fragment	FALSE	canonical	3	122	junction_7	8.29993306532582	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCACACATTGTTCCCAAT	62184291	True	NA	NA	False	AAAAAG	-27	NA	62187263	62232386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_62188032_62211152_62211243_62221036_62221109_62221218_62221275_62221383_62221498_62227288_62227493_62227597_62227690_62228304_62228599_62231193_62231270_62232331
transcript_66355.known	chr18	-	6881	3	FSM	ENSG00000171791.14	ENST00000333681.5	6881	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTGCCTGGAATTGTTTA	-63319757	False	115	-32	True	AATAAA	-19	NA	63319769	63123345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63128760_63318081_63318953_63319173
transcript_66356.known	chr18	-	5143	10	FSM	ENSG00000119537.18	ENST00000645214.2	5143	10	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_5	13.4421485642992	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTTATCTAGAAGTTTG	-63364037	True	NA	-4	True	AATAAA	-29	NA	63367206	63327725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63331902_63335256_63335359_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_66357.known	chr18	-	1378	9	FSM	ENSG00000119537.18	ENST00000591902.6	1378	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	45.3293503152207	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AACCTTCCATAAAAAAACAA	-63364031	True	NA	75	True	CATAAA	-23	NA	63367200	63331382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63331902_63338799_63338884_63344409_63344494_63350887_63351080_63355203_63355300_63355497_63355564_63359735_63359793_63362778_63362869_63367010
transcript_66360.known	chr18	+	785	2	FSM	ENSG00000267390.2	ENST00000589905.2	820	2	33	2	33	-2	multi-exon	FALSE	canonical	1	1	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGTGGTTTATTAT	63367286	True	NA	NA	False	AATAAA	-21	NA	63367327	63381629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63367860_63381376
transcript_66363.known	chr18	-	3337	11	FSM	ENSG00000119541.10	ENST00000238497.10	3337	11	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_5	21.2953046467995	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGTTTTTCAATGACTTT	-63417468	True	NA	0	True	ATTAAA	-23	NA	63422476	63389189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63391077_63393408_63393550_63397033_63397254_63399241_63399324_63400047_63400197_63400546_63400704_63403706_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_66370.nic	chr18	-	844	5	ISM	ENSG00000119541.10	ENST00000591475.5	2008	9	-12	7241	-12	3793	5prime_fragment	FALSE	canonical	3	319	junction_4	6.96419413859206	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATATATCTTTATACAAG	-63417487	True	NA	NA	False	AATAAA	-20	NA	63422495	63403582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_63403827_63407431_63407500_63410289_63410447_63411466_63411579_63422232
transcript_66372.known	chr18	-	551	4	FSM	ENSG00000119541.10	ENST00000591519.1	551	4	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_3	6.54896090146283	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTATTTGAATTGTTTT	-63417382	True	NA	NA	False	ATTAAA	-16	NA	63422390	63407375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63407500_63410289_63410447_63411466_63411579_63422232
transcript_66374.nic	chr18	-	485	3	ISM	ENSG00000119541.10	ENST00000591519.1	551	4	-105	2961	-12	-2961	5prime_fragment	FALSE	canonical	3	319	junction_2	3.5	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAAGCCAGTGAAAGAAGG	-63417487	True	NA	NA	False	AATAAA	-13	NA	63422495	63410336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_63410447_63411466_63411579_63422232
transcript_66375.known	chr18	+	2586	7	FSM	ENSG00000206075.14	ENST00000382771.9	2586	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.5723301886761	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTTGTTTTTTTTTTCCT	63476918	True	NA	NA	False	AATAAA	-17	NA	63476957	63505085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63477046_63484421_63484597_63486945_63487084_63489346_63489465_63492952_63493096_63499119_63499288_63503329
transcript_66376.known	chr18	-	1707	8	FSM	ENSG00000206073.11	ENST00000341074.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.98976975388345	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGCTTTACCTGTTTTC	-63644183	True	NA	NA	False	AATAAA	-18	NA	63644256	63637258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63638124_63639184_63639341_63639633_63639777_63640873_63640992_63641759_63641889_63643160_63643218_63643412_63643604_63644208
transcript_66378.known	chr18	-	1707	8	FSM	ENSG00000057149.16	ENST00000283752.10	1707	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.97948663722157	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCTTTACATTTTCTC	-63661837	True	NA	NA	False	AATAAA	-18	NA	63661893	63655196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63656062_63656830_63656987_63657269_63657413_63658512_63658631_63659398_63659528_63660799_63660857_63661051_63661243_63661845
transcript_66380.known	chr18	-	1541	7	FSM	ENSG00000057149.16	ENST00000332821.8	1541	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.77169096878911	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTGCTTTACATTTTCT	-63661828	False	NA	NA	False	AATAAA	-17	NA	63661884	63655197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63656062_63657269_63657413_63658512_63658631_63659398_63659528_63660799_63660857_63661051_63661243_63661845
transcript_66383.known	chr18	+	3321	7	FSM	ENSG00000166401.15	ENST00000397985.7	3321	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	2.62466929133727	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTTGTATGGACATATG	63970039	True	NA	NA	False	AATAAA	-26	NA	63970080	63989374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63970171_63978298_63978477_63979800_63979939_63981720_63981839_63983578_63983722_63985092_63985246_63986873
transcript_66388.nnic	chr18	+	812	5	NNC	ENSG00000221887.6	novel	2102	4	NA	NA	-70	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_4	12.0415945787923	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	63948786	True	NA	16	True	AATAAA	-16	NA	63949230	63961835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157_63960276_63961635
transcript_6639.known	chr1	+	377	3	FSM	ENSG00000213625.9	ENST00000497874.5	377	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	103.5	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCTCATTTGTTTATG	65417664	True	NA	NA	False	AATAAA	-18	NA	65420667	65428009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65427781
transcript_66390.nnic	chr18	+	655	4	NNC	ENSG00000221887.6	novel	2102	4	NA	NA	-87	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	14.1656862405839	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	NA	False	NA	16	True	AATAAA	-16	NA	63949213	63961835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_63949401_63954407_63954558_63960157_63960276_63961635
transcript_66391.known	chr18	+	2102	4	FSM	ENSG00000221887.6	ENST00000408945.5	2102	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	8.05536398239638	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCAGTGTGTCATGCC	63948856	True	NA	16	True	AATAAA	-16	NA	63949300	63961835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_63949401_63953353_63953528_63954407_63954558_63960157
transcript_66393.nic	chr18	+	488	3	ISM	ENSG00000221887.6	ENST00000481726.1	682	6	-143	21466	-87	108	5prime_fragment	FALSE	canonical	3	30	junction_1	5.5	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAACAGTTTTATAGTC	NA	False	NA	-99	True	GATAAA	-41	NA	63949213	63960308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_63949401_63954407_63954558_63960157
transcript_66394.nic	chr18	+	592	3	ISM	ENSG00000221887.6	ENST00000481726.1	682	6	-143	21362	-87	212	5prime_fragment	FALSE	canonical	3	30	junction_1	5.5	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCCAACTCGTAGACCT	NA	False	NA	5	True	ATTAAA	-16	NA	63949213	63960412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_63949401_63954407_63954558_63960157
transcript_66395.known	chr18	-	1609	3	FSM	ENSG00000283667.1	ENST00000637973.1	1609	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTCTTTATTCAAACAA	-63970103	False	NA	NA	False	NA	NA	NA	63970181	63966405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_63966869_63967986_63968274_63969322
transcript_66398.known	chr18	-	796	2	FSM	ENSG00000179676.7	ENST00000665461.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTCTCCTTATTTTCAT	NA	False	NA	NA	False	ATTAAA	-36	NA	64084361	64079988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_64080403_64083979
transcript_6640.known	chr1	+	492	3	FSM	ENSG00000213625.9	ENST00000475108.5	492	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	103	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGGAGATGAGTTTTA	65417583	True	NA	NA	False	AAGAAA	-8	NA	65420586	65432064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_65420741_65425302_65425379_65431802
transcript_66401.known	chr18	-	9266	2	FSM	ENSG00000171451.15	ENST00000310045.9	9266	2	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTATGATTGGGATAA	NA	False	NA	-10	True	AATAAA	-14	NA	67516720	67506586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_67515493_67516360
transcript_66402.known	chr18	-	4737	16	FSM	ENSG00000166479.10	ENST00000299608.7	4737	16	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_7	17.3789144271634	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTCTTATTTTTACTGT	-68712762	True	NA	0	True	AATAAA	-19	NA	68715108	68673687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_68677194_68679462_68679532_68680980_68681111_68682924_68682982_68684189_68684244_68684427_68684486_68687666_68687766_68691294_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_66406.nic	chr18	-	1074	9	ISM	ENSG00000166479.10	ENST00000299608.7	4737	16	-29	17326	-29	0	5prime_fragment	FALSE	canonical	3	120	junction_5	17.3277234511635	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATGTTCAGAATTCATTT	-68712791	True	NA	NA	False	AATAAA	-28	NA	68715137	68691013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_-_68691362_68697225_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_66408.known	chr18	-	937	8	FSM	ENSG00000166479.10	ENST00000562706.5	937	8	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_4	18.2029376413674	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTTACAAGTGGTGGAT	-68712712	True	NA	NA	False	AATAAA	-36	NA	68715058	68696935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_68697304_68697931_68698032_68700404_68700486_68701744_68701791_68710020_68710145_68711363_68711404_68713845_68713901_68714935
transcript_66426.known	chr18	+	1859	4	FSM	ENSG00000150636.17	ENST00000580292.2	1859	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.08248290463863	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTCTGT	68715100	True	NA	7	True	AATAAA	-21	NA	68715312	68755005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_68715362_68716527_68716595_68734733_68734767_68753295
transcript_66432.nnic	chr18	+	491	3	NNC	ENSG00000150636.17	novel	597	3	NA	NA	-79	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	5.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	68715129	68718130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_68715427_68716527_68716595_68718003
transcript_66433.nic	chr18	+	424	3	NIC	ENSG00000150636.17	novel	597	3	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_1	1	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	NA	False	NA	NA	False	AATAAA	-15	NA	68715131	68718130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_68715362_68716527_68716595_68718003
transcript_66434.known	chr18	+	597	3	FSM	ENSG00000150636.17	ENST00000582077.5	597	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTACCAAGTCTGTATTT	68714996	True	NA	NA	False	AATAAA	-15	NA	68715208	68718130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_68715612_68716527_68716595_68718003
transcript_66435.nic	chr18	+	732	2	ISM	ENSG00000150636.17	ENST00000580292.2	1859	4	-116	37911	-12	-1036	5prime_fragment	FALSE	canonical	2	11	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGTGGCAC	NA	False	NA	NA	False	NA	NA	NA	68715196	68717094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_68715362_68716527
transcript_66437.known	chr18	+	5703	2	FSM	ENSG00000170677.6	ENST00000397942.4	5703	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCCTTGTAGTCTACTTA	70287446	True	NA	6	True	AATAAA	-18	NA	70289044	70330199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_70289091_70324542
transcript_66442.nnic	chr18	+	502	3	NIC	ENSG00000263958.3	novel	2957	2	NA	NA	-71	-1	combination_of_known_splicesites	FALSE	canonical	3	4	junction_1	3.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	72868217	True	NA	4	True	AATAAA	-16	NA	72868316	72881397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_72868463_72880086_72880235_72881189
transcript_66444.known	chr18	+	457	3	FSM	ENSG00000263958.3	ENST00000578967.2	562	3	103	2	59	-1	multi-exon	FALSE	canonical	2	6	junction_1	2.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	72868833	False	NA	4	True	AATAAA	-16	NA	72869039	72881397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_72869141_72880086_72880235_72881189
transcript_66447.known	chr18	+	285	2	FSM	ENSG00000263958.3	ENST00000580564.1	285	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAATTCTGTTTTATTTTG	72868288	False	NA	6	True	AATAAA	-18	NA	72868387	72881399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_72868463_72881189
transcript_66448.nnic	chr18	+	492	2	FSM	ENSG00000263958.3	ENST00000687839.1	369	2	-124	1	-80	-1	multi-exon	FALSE	canonical	3	6	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGAATTCTGTTTTATTT	72868757	False	NA	4	True	AATAAA	-16	NA	72868856	72881397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_72869141_72881189
transcript_66449.known	chr18	-	1313	5	FSM	ENSG00000263711.6	ENST00000661525.1	1313	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACAGTCCTATAATCCTT	NA	False	NA	NA	False	AATAAA	-18	NA	73264478	73169329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_73170036_73172837_73172963_73200652_73200790_73255812_73255919_73264239
transcript_66451.known	chr18	+	1285	4	FSM	ENSG00000261780.3	ENST00000659659.1	1285	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	6.16441400296898	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTTTATAATTTGTG	73325079	False	NA	NA	False	ATTAAA	-16	NA	73325109	73349878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_73325194_73326901_73327189_73332462_73332582_73349083
transcript_66452.known	chr18	+	1167	3	FSM	ENSG00000261780.3	ENST00000666831.1	1167	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCACCTTTTATAATTTGTG	73324910	True	NA	NA	False	ATTAAA	-16	NA	73324940	73349878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_73325194_73332462_73332582_73349083
transcript_66453.known	chr18	-	1675	10	FSM	ENSG00000141665.13	ENST00000419743.7	1675	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.00616334280753	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTGTGCAATGCCTTTCA	-74147694	True	NA	-31	True	AATAAA	-14	NA	74147834	74073367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74073731_74081926_74082052_74123367_74123511_74124488_74124572_74125974_74126102_74129404_74129615_74130415_74130659_74135761_74135867_74140201_74140313_74147669
transcript_66464.known	chr18	+	3084	6	FSM	ENSG00000075336.12	ENST00000169551.11	3084	6	0	0	0	0	multi-exon	TRUE	canonical	3	457	junction_2	22.4	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGATTGTGGTGTCTCTG	74142561	True	NA	NA	False	ACTAAA	-39	NA	74148522	74160531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74149110_74155144_74155208_74155305_74155404_74158013_74158088_74158170_74158277_74158375
transcript_6648.known	chr1	+	3982	10	FSM	ENSG00000184588.18	ENST00000371045.9	3982	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_7	6.71648055986996	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTAGGCCCACTTATTT	66331987	False	NA	19	True	AATAAA	-20	NA	66332003	66374579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66332621_66355526_66355621_66361614_66361794_66363167_66363267_66363406_66363572_66365666_66365767_66367695_66367851_66367942_66368066_66368786_66368970_66372312
transcript_66489.known	chr18	+	858	3	FSM	ENSG00000075336.12	ENST00000577952.1	858	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	4	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTATGGGGAGGTGAC	74142576	True	NA	NA	False	NA	NA	NA	74148537	74158040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74149110_74155144_74155404_74158013
transcript_66490.known	chr18	+	821	4	FSM	ENSG00000075336.12	ENST00000579071.1	821	4	0	0	0	0	multi-exon	FALSE	canonical	3	457	junction_1	24.9577420631132	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTGTATTCATTTTATAT	74155150	False	NA	3	True	AATAAA	-15	NA	74155174	74158786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74155208_74155305_74155404_74158013_74158088_74158170
transcript_66512.known	chr18	-	3231	5	FSM	ENSG00000166347.19	ENST00000340533.9	3231	5	0	0	0	0	multi-exon	FALSE	canonical	3	2345	junction_2	44.4325331260778	6751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGGACTTGCCCTGAATT	-74277517	True	NA	-6	True	AATAAA	-18	NA	74291963	74250845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74291746
transcript_66513.known	chr18	-	776	6	FSM	ENSG00000166347.19	ENST00000494131.6	776	6	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	1186.92537254875	9486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGCACCGTGTTTGCCTGTT	-74277489	True	NA	-10	True	AATATA	-16	NA	74291935	74253296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74256829_74256854_74260914_74260945_74263348_74263478_74291746
transcript_66514.known	chr18	-	718	5	FSM	ENSG00000166347.19	ENST00000299438.13	718	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	1017.03171042008	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCGTGTTTGCCTGTTT	-74276595	False	NA	-9	True	AATATA	-17	NA	74291041	74253295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74260914_74260945_74263348_74263478_74290887
transcript_66515.known	chr18	-	619	4	FSM	ENSG00000166347.19	ENST00000397914.4	619	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1140.15554494405	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAAAGAACTGTCCT	-74277527	True	NA	-72	True	AATATA	-31	NA	74291973	74253437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74253666_74255740_74255776_74263348_74263478_74291746
transcript_66518.known	chr18	+	1467	2	FSM	ENSG00000286529.1	ENST00000660707.1	1467	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATATAAGAAGACAAGAAT	74293188	False	NA	NA	False	NA	NA	NA	74293216	74298662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74293338_74297316
transcript_66526.known	chr18	+	4975	12	FSM	ENSG00000133313.15	ENST00000324262.9	4975	12	0	0	0	0	multi-exon	FALSE	canonical	1	454	junction_9	311.175005901053	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGGACCAGTTTTTTTTA	74478108	True	NA	NA	False	AATAAA	-24	NA	74496362	74523454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_66538.nic	chr18	+	900	6	NIC	ENSG00000133313.15	novel	4975	12	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_5	563.041881213112	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	74478022	True	NA	18	True	AATAAA	-19	NA	74496276	74509335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_74496432_74499881_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74509138
transcript_66541.known	chr18	+	568	6	FSM	ENSG00000133313.15	ENST00000581513.5	568	6	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	708.532116420985	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTATGGGAGAGGTTCGA	74478104	True	NA	NA	False	NA	NA	NA	74496358	74508843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74497508_74497596_74499936_74500034_74501328_74501473_74505848_74506012_74508839
transcript_66547.known	chr18	+	586	2	FSM	ENSG00000133313.15	ENST00000580229.1	586	2	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTTTGACTGGATGAGT	74478107	True	NA	NA	False	NA	NA	NA	74496361	74498024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74497508
transcript_66548.known	chr18	+	2653	12	FSM	ENSG00000133313.15	ENST00000579847.5	2653	12	0	0	0	0	multi-exon	TRUE	canonical	1	338	junction_1	416.920389967015	918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATCTCAGTTGCTCGTC	74478052	True	NA	21	True	AATAAA	-30	NA	74496306	74521131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74496432_74499936_74500034_74501328_74501473_74505848_74506012_74508839_74508929_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_66549.known	chr18	+	536	4	FSM	ENSG00000133313.15	ENST00000577355.2	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	674.0385745638	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCTGGCTGGGTGCAGT	74501245	True	NA	18	True	AATAAA	-19	NA	74501385	74509335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74501473_74505848_74506012_74508839_74508929_74509138
transcript_66550.known	chr18	+	897	4	FSM	ENSG00000133313.15	ENST00000584768.5	897	4	0	0	0	0	multi-exon	FALSE	canonical	3	1412	junction_2	44.4522215417857	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGGCTGGGTGCAGTG	74499628	True	NA	19	True	AATAAA	-20	NA	74499940	74509336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74500034_74501328_74501473_74505848_74506012_74508839
transcript_66551.known	chr18	+	2349	9	FSM	ENSG00000133313.15	ENST00000324301.12	2349	9	0	0	0	0	multi-exon	FALSE	canonical	1	49	junction_2	535.299390528329	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGCTCCATCTCAGTTGCTC	74481606	False	NA	18	True	AATAAA	-27	NA	74499860	74521128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_74500034_74501328_74501473_74510812_74511014_74512447_74512533_74513558_74513720_74516227_74516393_74518498_74518641_74518948_74519097_74519998
transcript_66553.known	chr18	-	951	2	FSM	ENSG00000264247.2	ENST00000577806.1	951	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTTGTGGGACCCAGGC	-74597533	False	NA	NA	False	NA	NA	NA	74597569	74593200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74597257
transcript_66554.known	chr18	-	2418	2	FSM	ENSG00000264247.2	ENST00000652782.1	2418	2	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGACTTTGTGTTAACTAG	-74597509	True	NA	NA	False	AATAAA	-21	NA	74597833	74592827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74596427
transcript_66555.known	chr18	-	756	2	FSM	ENSG00000264247.2	ENST00000585279.1	756	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGACAACAAAATATGC	-74597476	True	NA	NA	False	NA	NA	NA	74597800	74593148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74597735
transcript_66556.known	chr18	-	423	2	FSM	ENSG00000264247.2	ENST00000581192.1	423	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTGTATGTTCTCACTC	-74598472	True	NA	NA	False	NA	NA	NA	74598508	74593695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74598229
transcript_66557.known	chr18	-	1076	2	FSM	ENSG00000264247.2	ENST00000657978.1	1076	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTCACTTCAAGGACTT	NA	False	NA	NA	False	AATAAA	-9	NA	74598835	74592839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_74593840_74598759
transcript_66558.known	chr18	-	7518	2	FSM	ENSG00000180011.7	ENST00000322342.4	7518	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATCATGTGTAGAGCGT	-75208994	False	NA	NA	False	AATAAA	-15	NA	75209139	75195112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_75202341_75208849
transcript_66562.known	chr18	+	631	3	FSM	ENSG00000265778.4	ENST00000657360.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATCTGCGCAGAGTTTGC	76491496	True	NA	NA	False	AAAACA	-22	NA	76491628	76493168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76491690_76492175_76492334_76492756
transcript_66563.known	chr18	+	1200	2	FSM	ENSG00000265778.4	ENST00000581996.3	1225	2	23	2	23	-2	multi-exon	FALSE	canonical	3	5	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGCTGCGCAAGTTGATC	76491519	True	NA	NA	False	AATAAA	-25	NA	76491651	76493918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76491690_76492756
transcript_66567.known	chr18	+	2076	2	FSM	ENSG00000275763.3	ENST00000622985.1	2076	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTTCCCTTGCTATTGTCT	76495484	True	NA	NA	False	AATAAA	-16	NA	76495520	76498088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76495787_76496278
transcript_66569.known	chr18	+	980	2	FSM	ENSG00000266256.3	ENST00000655002.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTGAAATTTGTTGCTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	76619396	76623562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76619571_76622756
transcript_66570.known	chr18	+	1371	2	FSM	ENSG00000266256.3	ENST00000666531.1	1371	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAAATTTGTTGCTTCAAA	NA	False	NA	NA	False	AATAAA	-20	NA	76619458	76623564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_76620022_76622756
transcript_66573.known	chr18	-	531	4	FSM	ENSG00000197971.16	ENST00000490754.5	531	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	18.4028983224563	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCGACGAGCTCCAGACCA	-77133651	False	NA	NA	False	NA	NA	NA	77133683	77017069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_77017269_77066297_77066386_77105210_77105287_77133515
transcript_66579.nnic	chr18	+	1477	3	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-136	-110372	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	3	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTTTTTGGACATCCA	NA	False	NA	NA	False	AATAAA	-22	NA	77421482	77450672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77421743_77421887_77422025_77449592
transcript_66585.nnic	chr18	+	543	3	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-136	16685	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	NA	False	NA	NA	False	NA	NA	NA	77421482	77577729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77421743_77421887_77422025_77577583
transcript_66586.nnic	chr18	+	562	3	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-136	27761	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATTCCTGGATATTGTAAG	NA	False	NA	NA	False	GATAAA	-18	NA	77421482	77588805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77421743_77421887_77422025_77588640
transcript_66592.nnic	chr18	+	438	3	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-116	16685	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	4.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	77421061	True	NA	NA	False	NA	NA	NA	77421502	77577729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77421658_77421887_77422025_77577583
transcript_66594.nnic	chr18	+	1213	3	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-112	16687	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGATGG	77421065	True	NA	NA	False	NA	NA	NA	77421506	77577731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77422025_77449592_77450140_77577583
transcript_66597.nnic	chr18	+	667	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-115	16685	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	48	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAGGAT	77421062	True	NA	NA	False	NA	NA	NA	77421503	77577729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77422025_77577583
transcript_66599.nnic	chr18	+	1598	2	NNC	ENSG00000264015.2	novel	843	3	NA	NA	-112	-110372	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTAGTTTTTGGACATCCA	77421065	True	NA	NA	False	AATAAA	-22	NA	77421506	77450672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr18_+_77422025_77449592
transcript_666.nic	SIRV7	-	930	5	NIC	SIRV7A	novel	949	5	NA	NA	-9	0	intron_retention	FALSE	canonical	3	2432	junction_4	2457.74942783027	7101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147966	56031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_SIRV7_-_56098_70883_70988_78841_78964_114680_114961_147608
transcript_6660.known	chr1	+	2262	5	FSM	ENSG00000152760.10	ENST00000282670.7	2262	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	2.6809513236909	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGTCTATTGTAACAATG	66752305	True	NA	NA	False	AATAAA	-30	NA	66752458	66779047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66752585_66754655_66754778_66770386_66770479_66776278_66776404_66777250
transcript_66601.known	chr18	-	1256	2	FSM	ENSG00000263146.3	ENST00000575722.1	1256	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCTTGCAATGTTGTT	NA	False	NA	0	True	ATTAAA	-19	NA	78978843	78976554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_78977430_78978462
transcript_66602.known	chr18	-	471	2	FSM	ENSG00000263146.3	ENST00000572007.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCCGGCACGCTGCTTTCG	-78977872	False	NA	NA	False	NA	NA	NA	78977883	78977287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_78977430_78977554
transcript_66603.known	chr18	+	838	3	FSM	ENSG00000256463.10	ENST00000573324.1	838	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	29	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCCAAATGTGATTATTTG	NA	False	NA	NA	False	AATAAA	-16	NA	78994797	79002677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_78994906_78995121_78995463_79002288
transcript_66609.known	chr18	+	1650	5	FSM	ENSG00000166377.21	ENST00000586722.5	1650	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	28.2079332812597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAACAACCCCATCAAAAAG	79069095	True	NA	NA	False	AAGAAA	-5	NA	79069407	79116082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_79069530_79096475_79096650_79110354_79110506_79113240_79113355_79114993
transcript_66612.nic	chr18	+	905	2	ISM	ENSG00000166377.21	ENST00000586722.5	1650	5	-85	18909	38	638	5prime_fragment	FALSE	canonical	3	72	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTAGAGAAAATTAGTGACT	NA	False	NA	NA	False	NA	NA	NA	79069322	79097173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr18_+_79069530_79096475
transcript_66613.known	chr18	+	2531	8	FSM	ENSG00000131196.18	ENST00000592223.5	2531	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	7.62915995589639	167	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTCCTGATGTGGTCTTTAA	79399658	True	NA	19	True	AATAAA	-19	NA	79400332	79468001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_79400480_79410402_79411502_79433578_79433739_79448781_79448985_79450953_79451127_79451675_79451817_79461310_79461367_79467449
transcript_66614.nnic	chr18	-	909	2	Genic_Genomic	ENSG00000274828.1	novel	2072	1	NA	NA	-12	2	multi-exon	FALSE	canonical	1	3	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTAAAGTTTTCCTTT	NA	False	NA	0	True	ATTAAA	-16	NA	79679370	79677284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr18_-_79678029_79679205
transcript_66615.known	chr18	-	2072	1	FSM	ENSG00000274828.1	ENST00000616428.1	2072	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTCTAAAGTTTTCCT	NA	False	NA	-2	True	ATTAAA	-14	NA	79679358	79677286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79677300_79679400
transcript_66617.known	chr18	-	988	5	FSM	ENSG00000141759.15	ENST00000585769.5	988	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	66.6197230555637	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACAAGCACGTGGTGAGAGG	-79959110	True	NA	27	True	NA	NA	NA	79988581	79973533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79976717_79976788_79977597_79977702_79986601_79986751_79988239
transcript_66622.nic	chr18	-	928	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	39	1	combination_of_known_junctions	FALSE	canonical	3	160	junction_2	579.940226805027	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCGTTTTGCATACT	-79988447	False	NA	-7	True	AGTAAA	-22	NA	79988463	79973405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_66623.known	chr18	-	546	4	FSM	ENSG00000141759.15	ENST00000592957.1	546	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	660.202157591816	764	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	-80033706	False	NA	-11	True	AATAAA	-20	NA	80033891	79973512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79977597_79977702_80030520_80030578_80033850
transcript_66624.nic	chr18	-	821	4	NIC	ENSG00000141759.15	novel	988	5	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	3	160	junction_2	579.940226805027	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGGCCTACTTGTTTGTTC	-79988447	False	NA	-11	True	AATAAA	-20	NA	79988463	79973512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_-_79973857_79977597_79977702_79986601_79986751_79988239
transcript_66632.known	chr18	-	1185	3	FSM	ENSG00000141759.15	ENST00000585474.5	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	678	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGGAATAGGAGAGCTAT	-80033764	True	NA	-6	True	AATAAA	-22	NA	80033949	79972874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79977597_79977702_80033850
transcript_66639.known	chr18	-	448	2	FSM	ENSG00000141759.15	ENST00000586612.1	448	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCGAAATAAACAAGCACGTG	-79986718	False	114	19	True	NA	NA	NA	79986734	79973541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_-_79973857_79986601
transcript_66650.known	chr18	+	5590	7	FSM	ENSG00000101546.13	ENST00000306735.10	5590	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_4	10.9239797387826	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTTCATACTTTCTTTTT	80031290	True	NA	5	True	AATAAA	-22	NA	80034433	80050651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80042134_80042220_80044211_80044286_80045773
transcript_66653.known	chr18	+	1219	6	FSM	ENSG00000101546.13	ENST00000262197.7	1219	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	73.6016304167238	2367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	80031322	True	NA	23	True	ATTAAA	-36	NA	80034465	80046397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80034654_80036667_80036711_80037329_80037507_80038504_80038618_80044211_80044286_80045773
transcript_66654.nnic	chr18	+	1204	6	NIC	ENSG00000101546.13	novel	5590	7	NA	NA	-8	0	combination_of_known_splicesites	TRUE	canonical	2	3	junction_3	74.1700748280599	2362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAAAATAGTGTCTCTGA	80031309	True	NA	23	True	ATTAAA	-36	NA	80034452	80046397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr18_+_80034654_80036667_80036711_80037329_80037507_80042134_80042220_80044211_80044286_80045773
transcript_66665.nnic	chr18	+	1034	2	FSM	ENSG00000267270.7	ENST00000691090.1	1040	2	3	3	0	1	multi-exon	TRUE	canonical	1	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCTTGTCACTCAGACCT	80147770	True	NA	10	True	ATTAAA	-14	NA	80147923	80149256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80148255_80148553
transcript_66666.known	chr18	+	1058	2	FSM	ENSG00000267270.7	ENST00000588226.6	1195	2	137	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTATTGCCCTCTCCCTCC	80147895	True	NA	27	True	ATTAAA	-31	NA	80148048	80149273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80148255_80148421
transcript_66668.known	chr18	+	662	1	FSM	ENSG00000278000.1	ENST00000616901.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTTCCCAGCTGTGACCA	NA	False	NA	14	True	AATAAA	-24	NA	80161751	80162413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr18_+_80161800_80162400
transcript_66669.known	chr19	-	398	3	FSM	ENSG00000282458.1	ENST00000632089.1	398	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	49	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	-68430	True	NA	NA	False	TATAAA	-16	NA	70945	65821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_66048_66345_66500_70927
transcript_66670.known	chr19	-	714	2	FSM	ENSG00000282458.1	ENST00000631796.1	714	2	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTGAGTGCATTAACTCA	-68448	True	NA	NA	False	TATAAA	-16	NA	70963	65821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_66500_70927
transcript_66671.known	chr19	-	1183	3	FSM	ENSG00000282591.1	ENST00000631376.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	77686	76162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_76784_76885_77091_77329
transcript_66678.known	chr19	-	850	6	FSM	ENSG00000141934.10	ENST00000633125.1	850	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	317.850908446083	1737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGTCACTGACGTT	-287497	True	NA	NA	False	NA	NA	NA	291398	281462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291288
transcript_66679.known	chr19	-	1228	6	FSM	ENSG00000141934.10	ENST00000269812.7	1228	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	309.872877160942	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGTCTCAGTGCTTCTGTTC	-287492	True	NA	-23	True	AGTAAA	-22	NA	291393	281042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_281538_282133_282311_282751_282810_287473_287752_288019_288172_291325
transcript_6669.known	chr1	+	758	3	FSM	ENSG00000152760.10	ENST00000525663.5	758	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	0.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGACGTTTATCCATTACC	66752305	True	NA	NA	False	NA	NA	NA	66752458	66770896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66752585_66754655_66754778_66770386
transcript_6670.known	chr1	-	1520	6	FSM	ENSG00000152763.17	ENST00000371022.3	1520	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.01980390271856	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATTACAAGCAAAGTTATA	-66924691	False	155	NA	False	NA	NA	NA	66924846	66870804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_66871510_66874780_66874938_66891153_66891267_66893228_66893414_66905200_66905376_66924661
transcript_66705.known	chr19	+	1147	5	FSM	ENSG00000099804.9	ENST00000586283.6	1147	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_4	764.054644642646	997	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAAGCTGTGCTTGGGAGG	520916	False	NA	20	True	AATAAA	-20	NA	532031	542092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_532109_535836_535924_536242_536341_537012_537148_541342
transcript_66709.known	chr19	+	1795	8	FSM	ENSG00000172270.22	ENST00000545507.6	1795	8	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_1	2649.90713737948	4544	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	NA	False	NA	25	True	AATAAA	-24	NA	571276	583493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_571580_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_6671.known	chr1	-	194	2	FSM	ENSG00000152763.17	ENST00000474506.1	194	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTCCAGTGCCTTT	-66924541	False	NA	NA	False	AATAAA	-33	NA	66924696	66921242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_66921402_66924661
transcript_66721.known	chr19	+	1329	6	FSM	ENSG00000172270.22	ENST00000618006.4	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3053.04853548056	630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	449008	True	NA	19	True	AATAAA	-18	NA	572618	583487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_66728.known	chr19	-	509	3	FSM	ENSG00000267751.6	ENST00000590292.6	1042	3	40	493	-6	-101	multi-exon	FALSE	canonical	3	32	junction_2	3.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCTGCTCTCGCTAGA	-571294	True	NA	-3	True	NA	NA	NA	571734	567310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567625_571439_571597_571696
transcript_66729.known	chr19	-	469	3	FSM	ENSG00000267751.6	ENST00000588290.3	469	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	19	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGTAATTTTCCTTGTC	-572192	False	NA	-14	True	AGTAAA	-19	NA	572228	567432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567625_571439_571597_572108
transcript_66731.known	chr19	-	625	3	FSM	ENSG00000267751.6	ENST00000588908.6	1041	3	18	398	-8	-11	multi-exon	FALSE	canonical	1	2	junction_1	15	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGACGTCATGAATTAA	-571296	True	NA	-6	True	NA	NA	NA	571736	567220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567649_571439_571597_571696
transcript_66742.known	chr19	-	721	2	FSM	ENSG00000267751.6	ENST00000589457.3	733	2	12	0	8	0	multi-exon	FALSE	canonical	3	39	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAATTAATTGCGAGAATG	-571305	True	NA	5	True	NA	NA	NA	571745	567209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_567625_571439
transcript_66747.known	chr19	+	1630	8	FSM	ENSG00000172270.22	ENST00000680065.1	1630	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2708.20634971803	5939	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATAAAGATCGCCCCCAC	448918	True	NA	-6	True	NA	NA	NA	572528	583462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582579_582749
transcript_66748.known	chr19	+	2314	7	FSM	ENSG00000172270.22	ENST00000576925.4	2314	7	0	0	0	0	multi-exon	FALSE	canonical	3	7277	junction_6	332.872723424434	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	448961	True	NA	-5	True	NA	NA	NA	572571	583463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_66749.known	chr19	+	1519	8	FSM	ENSG00000172270.22	ENST00000618112.4	1519	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2697.91779121664	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATAAAGATCGCCCCCACC	449024	True	NA	-5	True	NA	NA	NA	572634	583463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_579657_580378_580462_580655_580783_581314_581592_582305_582331_582513_582583_582749
transcript_66750.known	chr19	+	960	4	FSM	ENSG00000172270.22	ENST00000614867.2	960	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3570.25511071066	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTCACCCTCTCCTGGCTC	449012	True	NA	19	True	AATAAA	-18	NA	572622	583487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_579499_579580_582519_582583_582749
transcript_66751.known	chr19	+	1946	9	FSM	ENSG00000172270.22	ENST00000333511.9	1946	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	3277.54205731978	4522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTCTCCTGGCTCCTGTCT	448985	True	NA	25	True	AATAAA	-24	NA	572595	583493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_572702_577773_578122_579499_579657_580378_580462_580645_580783_581314_581592_582305_582331_582513_582583_582749
transcript_66754.known	chr19	-	3771	21	FSM	ENSG00000099821.14	ENST00000588649.7	3771	21	0	0	0	0	multi-exon	TRUE	canonical	3	641	junction_6	84.7132073528089	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTGTCTTCAGGAAGGG	-621965	True	NA	-35	True	AATAAA	-22	NA	633537	617220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776_617850_618487_618587_618704_618761_618996_619111_619209_619297_619585_619766_619957_620081_620364_620488_621057_621847_622148_622374_622581_622753_622820_622986_623453_623604_624718_624906_625123_625255_629539_630169_632833_632939_633424
transcript_66756.known	chr19	-	1229	4	FSM	ENSG00000099821.14	ENST00000587057.5	1229	4	0	0	0	0	multi-exon	FALSE	canonical	3	712	junction_3	92.5250716772967	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGGAGCCACTGTCTTCA	-618728	False	NA	-42	True	AATAAA	-15	NA	618758	617227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_617324_617418_617481_617569_618587_618704
transcript_66757.known	chr19	-	469	4	FSM	ENSG00000099821.14	ENST00000592633.5	469	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	18.5711843695788	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGCCACTGTCTTCAGGAA	-617967	False	NA	-38	True	AATAAA	-19	NA	617997	617223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_617324_617418_617481_617569_617656_617776
transcript_66758.known	chr19	-	1631	9	FSM	ENSG00000070423.18	ENST00000292363.10	1631	9	0	0	0	0	multi-exon	TRUE	canonical	3	778	junction_5	60.578461518926	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGTGCTGTGGCTTTCCT	-658042	True	NA	-5	True	AATACA	-17	NA	663214	647525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651610_651856_652232_652297_652825_652885_663046
transcript_66759.known	chr19	-	963	9	FSM	ENSG00000070423.18	ENST00000589762.5	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_5	245.18229824969	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGCCCACGTCGGCCGTC	-658061	True	NA	NA	False	NA	NA	NA	663233	648131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_648278_648371_648488_648881_648976_649678_649749_650233_650297_651691_651856_652232_652297_652825_652885_663046
transcript_6676.known	chr1	+	1728	15	FSM	ENSG00000198160.15	ENST00000371014.5	1728	15	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	27.5102949190046	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	66923549	True	NA	NA	False	NA	NA	NA	66924958	66986670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_66761.known	chr19	+	2144	3	FSM	ENSG00000070404.10	ENST00000592947.5	2144	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	9	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGGTGTCCAGGCCTCAGT	680634	False	NA	8	True	AATAAA	-15	NA	680706	683392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_680880_681332_681561_681649
transcript_66764.known	chr19	+	746	3	FSM	ENSG00000070404.10	ENST00000588773.5	746	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	14	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCTCTAGTCTGGGT	680474	True	NA	NA	False	NA	NA	NA	680714	682107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_680775_681332_681561_681649
transcript_66765.known	chr19	+	748	3	FSM	ENSG00000070404.10	ENST00000605925.3	748	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAAGCCTCTAGTCTGGGT	680510	True	NA	NA	False	NA	NA	NA	680750	682107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_680813_681332_681561_681649
transcript_66768.known	chr19	+	1346	6	FSM	ENSG00000099864.18	ENST00000592870.5	1346	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	1.49666295470958	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGAGGAATGAACTGTGA	708960	False	NA	59	True	NA	NA	NA	709096	735048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_709152_726137_726190_727007_727089_727563_727695_731094_731246_734172
transcript_66774.nnic	chr19	-	685	2	Genic_Genomic	ENSG00000272473.1	novel	861	1	NA	NA	-790	0	multi-exon	FALSE	canonical	1	3	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGAGTCCCCTTTTTCT	-782615	True	NA	NA	False	AATAAA	-20	NA	782652	781001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_781238_782203
transcript_66778.known	chr19	+	603	1	FSM	ENSG00000267530.4	ENST00000666859.1	603	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAAGCTGCCCAGAAATCCA	782475	True	NA	NA	False	NA	NA	NA	782776	783379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_782800_783400
transcript_66779.known	chr19	+	1023	2	FSM	ENSG00000267530.4	ENST00000606242.3	1045	2	0	22	0	-22	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTAACCACTTGTTACCTC	782461	True	NA	NA	False	NA	NA	NA	782762	785269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_783331_784814
transcript_66780.known	chr19	+	864	2	FSM	ENSG00000267530.4	ENST00000665908.1	864	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAACATCTGTATC	782476	True	NA	NA	False	AATAAA	-15	NA	782777	786092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_783331_785781
transcript_66782.known	chr19	-	2306	8	FSM	ENSG00000129951.19	ENST00000520876.8	2306	8	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_7	55.681308921983	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCGGCTCTTGGTCATTC	-817850	True	NA	-30	True	AATAAA	-15	NA	821955	812487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_813896_814433_814608_814691_814750_814885_815082_815185_815328_815665_815852_821484_821586_821914
transcript_66786.known	chr19	+	1036	4	FSM	ENSG00000196415.10	ENST00000544537.2	1036	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.44948974278318	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTGGCTCCTGTCTGTCCT	NA	False	NA	4	True	AATAAA	-13	NA	843340	848175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_843627_843892_844035_846146_846378_847798
transcript_66787.known	chr19	+	1191	5	FSM	ENSG00000197766.8	ENST00000327726.11	1191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.5841423566947	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTGTAATCCCAGCACTT	NA	False	NA	NA	False	NA	NA	NA	859663	863641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_859745_860616_860774_860860_861006_861698_861957_863091
transcript_66789.known	chr19	-	3420	15	FSM	ENSG00000175221.16	ENST00000395808.7	3420	15	0	0	0	0	multi-exon	TRUE	canonical	3	287	junction_5	65.1152823843988	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGCTGTTTCTGTGTCTCT	-885233	True	NA	NA	False	NA	NA	NA	893218	867629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_868500_868862_868947_871036_871254_871925_872119_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769_886202_889637_889808_890136_890245_890962_891150_893085
transcript_66791.known	chr19	-	2004	10	FSM	ENSG00000175221.16	ENST00000607471.5	2004	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	142.598720407051	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCCCGCGTCCCTGCCGTCG	-877924	False	NA	-15	True	AATAAA	-16	NA	885909	867962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_868500_868862_868947_871036_871254_873448_873583_875243_875455_876973_877181_879936_880149_881558_881715_884902_885009_885769
transcript_66795.known	chr19	-	1803	8	FSM	ENSG00000198858.10	ENST00000361574.10	1803	8	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_7	51.5664817572067	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-906692	True	NA	-7	True	AATAAA	-17	NA	913219	896502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901421_901547_901975_902131_913086
transcript_66796.known	chr19	-	1704	7	FSM	ENSG00000198858.10	ENST00000589428.5	1704	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	231.759034343863	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCGGGCTATGTGTGTTTTT	-913212	False	NA	-7	True	AATAAA	-17	NA	913245	896502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_897541_899439_899496_899600_899687_900060_900147_900828_900953_901975_902131_913086
transcript_668.known	SIRV7	-	949	5	FSM	SIRV7A	SIRV706	949	5	0	0	0	0	multi-exon	FALSE	canonical	3	3729	junction_1	1870.01983612474	9733	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAAGAGATCGACGAAGTT	NA	False	NA	NA	False	NA	NA	NA	147957	56031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_56098_70883_70988_78841_78964_114680_114989_147608
transcript_66802.known	chr19	+	1498	10	FSM	ENSG00000065268.11	ENST00000591985.6	1498	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	465.850980252773	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTCCTCTCCGGCCTCC	975005	True	NA	16	True	NA	NA	NA	984357	994554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991233_991352_991954_992122_994019_994089_994212
transcript_66810.known	chr19	+	1465	9	FSM	ENSG00000065268.11	ENST00000587001.6	1465	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_8	465.81541408588	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTCTCCGGCCTCCTTG	974979	True	NA	19	True	NA	NA	NA	984331	994557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_984564_985864_985976_989761_989896_990222_990365_990851_990996_991080_991146_991226_991352_991954_992122_994212
transcript_66811.known	chr19	+	417	2	FSM	ENSG00000065268.11	ENST00000591155.1	417	2	0	0	0	0	multi-exon	FALSE	canonical	3	1664	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTCCTCTCCGGCCTCC	993994	False	NA	16	True	NA	NA	NA	994013	994554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_994089_994212
transcript_66812.known	chr19	+	107	1	FSM	ENSG00000207357.1	ENST00000384627.1	107	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTAGTCTACAGCTCGTC	1021425	True	NA	NA	False	NA	NA	NA	1021521	1021628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1021500_1021600
transcript_66815.known	chr19	+	2149	7	FSM	ENSG00000064666.15	ENST00000263097.9	2149	7	0	0	0	0	multi-exon	FALSE	canonical	3	2356	junction_6	139.610967413818	1033	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGTGGCCAAGAGAGTTG	976390	True	NA	28	True	AATAAA	-20	NA	1026607	1039065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036129_1036247_1036415_1036563_1037624
transcript_66816.known	chr19	+	2033	6	FSM	ENSG00000064666.15	ENST00000348419.7	2033	6	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_4	984.345752263908	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976392	True	NA	31	True	AATAAA	-23	NA	1026609	1039068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036415_1036563_1037624
transcript_66817.known	chr19	+	2109	7	FSM	ENSG00000064666.15	ENST00000565096.6	2109	7	0	0	0	0	multi-exon	FALSE	canonical	3	197	junction_4	909.023545105161	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976400	True	NA	31	True	AATAAA	-23	NA	1026617	1039068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032664_1036129_1036247_1036415_1036563_1037624
transcript_66818.known	chr19	+	2194	7	FSM	ENSG00000064666.15	ENST00000562958.6	2194	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	978.693800713765	452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGCCAAGAGAGTTGGCG	976411	True	NA	31	True	AATAAA	-23	NA	1026628	1039068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1026725_1031070_1031193_1032391_1032459_1032558_1032697_1036066_1036247_1036415_1036563_1037624
transcript_66819.known	chr19	+	6815	47	FSM	ENSG00000064687.13	ENST00000263094.11	6815	47	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_12	22.0315978618852	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTGCATGTGTGTCCTT	1038589	True	NA	20	True	AATAAA	-33	NA	1040106	1065572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1040197_1041224_1041428_1041509_1041604_1041830_1041973_1042063_1042177_1042314_1042398_1042745_1042827_1043040_1043252_1043333_1043474_1043724_1043842_1044576_1044745_1045001_1045232_1046229_1046407_1046801_1047025_1047156_1047379_1047452_1047655_1048894_1049006_1049265_1049438_1050920_1051053_1051154_1051295_1051448_1051587_1051941_1052127_1052213_1052287_1053328_1053532_1053787_1053837_1054005_1054111_1054192_1054342_1054569_1054695_1054779_1054879_1055096_1055352_1055906_1055940_1056065_1056244_1056329_1056500_1056906_1057085_1057313_1057430_1057914_1058060_1058145_1058270_1058617_1058748_1058819_1058941_1059022_1059086_1061781_1061889_1062171_1062314_1063543_1063679_1063759_1063864_1064160_1064254_1064930_1065172_1065269
transcript_6682.known	chr1	+	5456	14	FSM	ENSG00000198160.15	ENST00000401041.6	5456	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	28.4887603706378	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTTGAGTAAGAAGTAATTT	66923580	True	NA	NA	False	ATTAAA	-17	NA	66924989	66988619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_66827.known	chr19	-	1214	8	FSM	ENSG00000099817.12	ENST00000591767.5	1214	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	1463.0322718831	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTCCAGCAGGTGGCCTT	-1056000	True	NA	NA	False	AATAAA	-34	NA	1095336	1088147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093755_1093904_1095258
transcript_66828.known	chr19	-	487	7	FSM	ENSG00000099817.12	ENST00000585838.2	487	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1528.81647216255	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTCACGGCTGCTGCTC	-1095248	False	NA	NA	False	NA	NA	NA	1095261	1088644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088714_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1095258
transcript_66831.known	chr19	+	940	4	FSM	ENSG00000180448.11	ENST00000586378.5	940	4	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_1	21.0607586652417	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCGTGTGAGCTGGGGTGG	NA	False	NA	NA	False	NA	NA	NA	1082783	1085996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1083067_1083142_1083354_1084237_1084347_1085659
transcript_66833.known	chr19	+	1563	3	FSM	ENSG00000180448.11	ENST00000592297.2	1563	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	7	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGCTGAAATAAAAAGTTTT	NA	False	NA	-14	True	NA	NA	NA	1082840	1086600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1083354_1084237_1084347_1085659
transcript_66834.known	chr19	-	2854	8	FSM	ENSG00000099817.12	ENST00000615234.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	3	3087	junction_2	289.115611364544	4181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTTCCGAGAGACCC	-1056039	True	NA	-23	True	AATAAA	-22	NA	1095375	1086573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_66835.known	chr19	+	1284	4	FSM	ENSG00000180448.11	ENST00000591169.2	1284	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	109.985857676744	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGTGGCAGCTGCA	1082926	False	NA	14	True	AATAAA	-16	NA	1082938	1086628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1083067_1083275_1083354_1084237_1084347_1085659
transcript_66836.known	chr19	-	1096	8	FSM	ENSG00000099817.12	ENST00000586746.5	1096	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1230.21133077506	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACACGGTGGCTTCCGAGA	-1056018	True	NA	-28	True	AATAAA	-17	NA	1095354	1086578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1086989_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_66837.known	chr19	-	1286	8	FSM	ENSG00000099817.12	ENST00000215587.11	1286	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1229.790043471	4738	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCCGACTAACAAGGTTT	-1056038	True	NA	NA	False	AATAAA	-19	NA	1095374	1088162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089574_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_66838.known	chr19	-	2441	7	FSM	ENSG00000099817.12	ENST00000586817.5	2441	7	0	0	0	0	multi-exon	FALSE	canonical	3	3087	junction_2	215.680898551541	507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAACCAGGCCGACTAACAAG	-1056039	True	NA	NA	False	AATAAA	-15	NA	1095375	1088166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088721_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903
transcript_66839.known	chr19	-	1749	8	FSM	ENSG00000099817.12	ENST00000612655.4	1749	8	0	0	0	0	multi-exon	FALSE	canonical	2	71	junction_1	1205.96107833088	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAAAGGGACAAACACT	-1056044	True	NA	NA	False	NA	NA	NA	1095380	1087644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1088682_1089471_1089552_1089883_1089963_1090086_1090146_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_6684.known	chr1	+	1648	14	FSM	ENSG00000198160.15	ENST00000401042.7	1648	14	0	0	0	0	multi-exon	FALSE	canonical	2	43	junction_1	18.1228549026494	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTAATGTACATTCACTGTT	66930231	False	NA	NA	False	NA	NA	NA	66930242	66986670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571_66984593_66986402
transcript_66840.known	chr19	-	589	6	FSM	ENSG00000099817.12	ENST00000614705.4	589	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1432.27952579097	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCGTGGGCAGGTGAGCC	-1056018	True	NA	NA	False	NA	NA	NA	1095354	1089896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1089963_1090086_1090142_1090907_1090989_1091791_1091908_1093903_1094079_1095258
transcript_66842.known	chr19	+	1002	8	NNC	ENSG00000167468.19	novel	536	6	NA	NA	-56	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	1533.60415827739	882	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTTCTGCGTAGGGGCTT	1102522	True	NA	21	True	AATAAA	-21	NA	1104649	1106787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1104930_1105185_1105281_1105365_1105403_1105405_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106539
transcript_66853.known	chr19	+	812	6	FSM	ENSG00000167468.19	ENST00000589115.6	812	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	1392.03930978978	905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1073111	True	NA	13	True	AATAAA	-13	NA	1104007	1106779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106399_1106460_1106539
transcript_66854.known	chr19	+	803	7	FSM	ENSG00000167468.19	ENST00000588919.5	803	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	1272.86317672665	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGCGTAGGGGCTTG	1073176	True	NA	22	True	AATAAA	-22	NA	1104072	1106788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1104128_1105185_1105281_1105365_1105511_1105657_1105810_1106241_1106267_1106377_1106460_1106539
transcript_66855.known	chr19	+	501	5	FSM	ENSG00000167468.19	ENST00000585480.1	501	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	1524.2723673937	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGGATCTTTCTGCGT	1105421	False	NA	13	True	AATAAA	-13	NA	1105453	1106779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1105511_1105657_1105810_1106241_1106267_1106399_1106460_1106572
transcript_66856.nnic	chr19	+	526	2	Antisense	novelGene_ENSG00000064932.16_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCTCTGGGCCTGTCAGA	NA	False	NA	2	True	AATAAA	-40	NA	1173789	1174990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_1173885_1174559
transcript_66858.known	chr19	+	3293	10	FSM	ENSG00000118046.17	ENST00000326873.12	3293	10	0	0	0	0	multi-exon	TRUE	canonical	3	517	junction_8	40.2188457760234	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCGTCTGGGTTTTGT	1203666	True	NA	17	True	AATAAA	-21	NA	1205777	1228431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1207204_1218416_1218501_1219323_1219414_1220372_1220506_1220580_1220718_1221212_1221341_1221948_1222007_1222984_1223173_1226453_1226664_1227592
transcript_66859.nnic	chr19	+	282	2	NIC	ENSG00000267778.1	novel	844	3	NA	NA	-72	3	combination_of_known_splicesites	FALSE	canonical	3	13	junction_1	0	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTACCTGTACTAAACGGGG	1238042	False	NA	NA	False	AATAAA	-27	NA	1238106	1239525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_1238227_1239363
transcript_66860.known	chr19	+	704	5	FSM	ENSG00000099624.8	ENST00000395633.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_4	330.846924573888	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222552	True	NA	28	True	ATTAAA	-16	NA	1241745	1244825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314_1244441_1244736
transcript_66861.known	chr19	+	995	4	FSM	ENSG00000099624.8	ENST00000215375.7	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_3	37.6769897358528	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1222557	True	NA	28	True	ATTAAA	-16	NA	1241750	1244825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1241992_1242455_1242610_1244096_1244186_1244314
transcript_66862.known	chr19	+	343	3	FSM	ENSG00000099624.8	ENST00000614837.1	343	3	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_2	363.5	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1244037	False	NA	28	True	ATTAAA	-16	NA	1244057	1244825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1244186_1244314_1244441_1244736
transcript_66863.known	chr19	+	640	2	FSM	ENSG00000099624.8	ENST00000589478.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	0	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGTGCTCGGCTCTTGTT	1244036	False	NA	28	True	ATTAAA	-16	NA	1244056	1244825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1244186_1244314
transcript_66879.known	chr19	+	1303	7	FSM	ENSG00000099622.14	ENST00000586472.5	1303	7	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	369.221553481857	1277	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1266593	True	NA	NA	False	ATTAAA	-18	NA	1266652	1273172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1266702_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_6688.known	chr1	+	4818	13	FSM	ENSG00000198160.15	ENST00000355356.3	4818	13	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	18.8628087928483	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTCTTTGCTATCGATGG	66930231	False	NA	17	True	AATAAA	-18	NA	66930242	66988030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087_66963161_66970807_66970960_66971654_66971737_66972896_66972992_66976594_66976723_66981778_66981919_66984571
transcript_66881.known	chr19	+	1459	7	FSM	ENSG00000099622.14	ENST00000588090.5	1459	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	374.63200462439	1272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1267047	False	NA	NA	False	ATTAAA	-18	NA	1267087	1273172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1267293_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_66884.known	chr19	+	870	7	FSM	ENSG00000099622.14	ENST00000585630.5	870	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	344.407421845439	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTGACCGCTTCTGA	1269225	False	NA	55	True	NA	NA	NA	1269265	1272582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_66885.known	chr19	+	942	7	FSM	ENSG00000099622.14	ENST00000586773.5	942	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	410.667613635272	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCGCCTGGAGCCCG	1269286	False	NA	NA	False	NA	NA	NA	1269326	1274595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_66889.known	chr19	+	1835	6	FSM	ENSG00000099622.14	ENST00000589710.5	1835	6	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	376.4781002927	548	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1269225	False	NA	NA	False	ATTAAA	-18	NA	1269265	1273172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270866_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980
transcript_66895.known	chr19	+	769	2	FSM	ENSG00000099622.14	ENST00000589161.1	769	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGCAAGATGCAACAT	1261527	False	NA	NA	False	NA	NA	NA	1261820	1264698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1262144_1264252
transcript_66896.known	chr19	+	796	2	FSM	ENSG00000099622.14	ENST00000592467.1	796	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCTGACCCTCCAGGGAC	1260872	True	NA	NA	False	NA	NA	NA	1261165	1264572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1261642_1264252
transcript_66897.known	chr19	-	1356	2	FSM	ENSG00000267493.4	ENST00000585832.3	1356	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGTGCCTAGTTATTAAG	-1270030	False	NA	-3	True	NA	NA	NA	1270260	1267470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1268391_1269824
transcript_66898.known	chr19	+	1328	7	FSM	ENSG00000099622.14	ENST00000320936.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_6	94.1855438306042	3825	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGCTCTGACAATTCCCT	1262480	True	NA	NA	False	ATTAAA	-18	NA	1269336	1273172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1272426
transcript_66899.known	chr19	+	938	8	FSM	ENSG00000099622.14	ENST00000586636.5	938	8	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	333.559773427462	1781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGCGCACGAGTAGGACC	1262490	True	NA	87	True	AAGAAA	-17	NA	1269346	1274880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306_1274441_1274648
transcript_66900.known	chr19	+	1073	7	FSM	ENSG00000099622.14	ENST00000589235.5	1073	7	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_6	291.282795006273	420	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1262493	True	NA	17	True	AATAAA	-23	NA	1269349	1274810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1274306
transcript_66901.known	chr19	+	1052	9	FSM	ENSG00000099622.14	ENST00000585914.5	1052	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	474.444411917771	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGATTCGAATAAAGGGCC	1262495	True	NA	-20	True	NA	NA	NA	1269351	1274773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271247_1271328_1271468_1271550_1271633_1271980_1272052_1273493_1273716_1274306_1274445_1274648
transcript_66902.known	chr19	+	796	6	FSM	ENSG00000099622.14	ENST00000593128.5	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	775	junction_5	97.3952770928858	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTAGTCATTTCGGTTCTGA	1262474	True	NA	25	True	AGTAAA	-25	NA	1269330	1272552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1269411_1270927_1271037_1271139_1271468_1271550_1271633_1271980_1272052_1272426
transcript_66903.known	chr19	+	584	4	FSM	ENSG00000099622.14	ENST00000444172.6	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	131.659493475489	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAAGCCGAGTCTGTGGTTC	1271954	False	NA	13	True	AATAAA	-19	NA	1271981	1274806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1272052_1273493_1273716_1274306_1274441_1274648
transcript_66904.known	chr19	+	1087	3	FSM	ENSG00000099622.14	ENST00000588917.2	1087	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	116	656	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1272897	False	NA	17	True	AATAAA	-23	NA	1272924	1274810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1273716_1274306_1274441_1274648
transcript_66905.known	chr19	+	716	2	FSM	ENSG00000099622.14	ENST00000586555.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGAGTCTGTGGTTCAGGG	1273476	False	NA	17	True	AATAAA	-23	NA	1273503	1274810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1273716_1274306
transcript_66906.known	chr19	+	870	3	FSM	ENSG00000228300.14	ENST00000409293.6	870	3	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_1	117.5	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	1270966	True	NA	11	True	AATAAA	-19	NA	1275529	1279228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1275831_1277182_1277300_1278776
transcript_66907.known	chr19	+	751	3	FSM	ENSG00000228300.14	ENST00000590269.2	751	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	237.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCCCAGTGCCCAGCAACC	1276042	False	NA	NA	False	NA	NA	NA	1276099	1278836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1276674_1277182_1277300_1278776
transcript_66909.nnic	chr19	+	797	3	NNC	ENSG00000228300.14	novel	668	3	NA	NA	29	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	229.5	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTGCTGACCCCATGCC	1273340	True	NA	11	True	AATAAA	-19	NA	1276049	1279228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1276278_1277182_1277300_1278776
transcript_66912.known	chr19	+	668	3	FSM	ENSG00000228300.14	ENST00000469144.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_1	158.5	886	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1273311	True	NA	27	True	AATAAA	-35	NA	1276020	1279244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1276104_1277182_1277300_1278776
transcript_66913.known	chr19	+	1675	2	FSM	ENSG00000228300.14	ENST00000485191.5	1675	2	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCACCTCTAGACCCGTGC	1276037	False	NA	27	True	AATAAA	-35	NA	1276092	1279244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1277300_1278776
transcript_66919.nic	chr19	+	1635	5	NIC	ENSG00000160953.17	novel	1513	4	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_4	121.021692270436	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	1351193	True	NA	NA	False	NA	NA	NA	1354975	1359894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_1355021_1356323_1356450_1357008_1357095_1358393_1358465_1358587
transcript_66921.known	chr19	+	1513	4	FSM	ENSG00000160953.17	ENST00000590866.2	1513	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	118.412649474436	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGTCAATAAATTTGGTTT	1351189	True	NA	NA	False	NA	NA	NA	1354971	1359894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1355021_1357008_1357095_1358393_1358465_1358587
transcript_66922.known	chr19	+	522	3	FSM	ENSG00000160953.17	ENST00000592374.6	522	3	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	124.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTAAGTGTTGTGTTGTTTT	NA	False	NA	NA	False	AAGAAA	-43	NA	1354710	1357094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1355021_1356323_1356450_1357008
transcript_66925.known	chr19	+	1264	2	FSM	ENSG00000160953.17	ENST00000588888.2	1264	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGCATCTGATATTAAAC	NA	False	NA	17	True	NA	NA	NA	1373506	1376917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1374372_1376518
transcript_66926.known	chr19	+	869	9	FSM	ENSG00000115286.21	ENST00000546172.7	869	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	746.278893912993	1094	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCAGTGTGGTGTGTGGGT	1361032	True	NA	25	True	AATAAA	-21	NA	1383917	1395584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1383943_1386517_1386640_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_66934.known	chr19	+	745	8	FSM	ENSG00000115286.21	ENST00000534853.5	745	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	604.251569450733	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCTCCCAGTGTGGT	1361021	True	NA	17	True	AATAAA	-13	NA	1383906	1395576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1383938_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1395390
transcript_66935.known	chr19	+	2818	7	FSM	ENSG00000115286.21	ENST00000313408.11	2818	7	0	0	0	0	multi-exon	FALSE	canonical	3	1158	junction_1	220.897915084975	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCAGTGTGGTGTGTG	1361018	True	NA	22	True	AATAAA	-18	NA	1383903	1395581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241
transcript_66936.known	chr19	+	1743	8	FSM	ENSG00000115286.21	ENST00000539480.5	1743	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_7	605.168554695167	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGTGTGTGGGTGAAAG	1361014	True	NA	30	True	AATAAA	-26	NA	1383899	1395589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1383943_1387810_1387848_1388524_1388594_1388832_1388939_1390870_1391051_1391118_1391166_1393241_1393331_1394417
transcript_66938.known	chr19	-	1110	6	FSM	ENSG00000130005.13	ENST00000252288.8	1110	6	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	27.7171427098826	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGGTGACTCCCCTCCA	-1397436	True	NA	58	True	NA	NA	NA	1401542	1397025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1397500_1398915_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_66939.known	chr19	-	1769	5	FSM	ENSG00000130005.13	ENST00000447102.8	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	17.7816619020833	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTCTGGTGTGATTCTTTG	-1397464	True	NA	-1	True	NA	NA	NA	1401570	1397810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1399027_1399127_1399196_1399523_1399588_1399792_1399939_1401295
transcript_6694.nic	chr1	+	881	8	ISM	ENSG00000198160.15	ENST00000371014.5	1728	15	-40	23511	24	3081	5prime_fragment	FALSE	canonical	3	22	junction_1	30.0448644122589	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGTTATTAGTAAAGTT	66923509	True	NA	NA	False	AAGAAA	-9	NA	66924918	66963159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66925096_66926141_66926243_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_66943.known	chr19	+	2086	12	FSM	ENSG00000071626.17	ENST00000587079.5	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_4	277.981181359607	2486	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCACTTTGTGTCCGTTTTT	1407595	False	NA	32	True	AATAAA	-23	NA	1407679	1435683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1407803_1417499_1417541_1418203_1418371_1418665_1418732_1421150_1421259_1422347_1422397_1425877_1425961_1428841_1428996_1429966_1429997_1430221_1430363_1432513_1432691_1434736
transcript_66953.known	chr19	+	629	4	FSM	ENSG00000115268.10	ENST00000593052.5	629	4	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	8870.42922674358	15981	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307619	True	NA	29	True	AATAAA	-17	NA	1438418	1440494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438581_1438806_1438893_1440018_1440254_1440348
transcript_66954.known	chr19	+	873	3	FSM	ENSG00000115268.10	ENST00000592623.5	873	3	0	0	0	0	multi-exon	FALSE	canonical	3	19200	junction_2	653	15012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307601	True	NA	29	True	AATAAA	-17	NA	1438400	1440494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_66955.known	chr19	+	711	5	FSM	ENSG00000115268.10	ENST00000591804.6	711	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	8621.60954738151	2152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307606	True	NA	29	True	AATAAA	-17	NA	1438405	1440494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1439605_1439827_1440018_1440254_1440348
transcript_66956.known	chr19	+	562	4	FSM	ENSG00000115268.10	ENST00000586686.6	562	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	8199.41259413678	2357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307585	True	NA	29	True	AATAAA	-17	NA	1438384	1440494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1439967_1440254_1440348
transcript_66957.known	chr19	+	570	3	FSM	ENSG00000115268.10	ENST00000586096.3	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14741	junction_1	2882.5	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307621	True	NA	29	True	AATAAA	-17	NA	1438420	1440494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1440018
transcript_66958.known	chr19	+	467	4	FSM	ENSG00000115268.10	ENST00000585665.2	467	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	8176.43227004704	1991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTGCGCAGCTTGTTC	1307622	True	NA	29	True	AATAAA	-17	NA	1438421	1440494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1440025_1440254_1440348
transcript_66959.known	chr19	+	550	4	FSM	ENSG00000115268.10	ENST00000591032.1	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	8198.03368023224	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCCTTTGCGCAGCTT	1307600	True	NA	25	True	AATAAA	-13	NA	1438399	1440490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438429_1438806_1438893_1439960_1440254_1440348
transcript_66960.nnic	chr19	+	1929	3	FSM	ENSG00000268798.1_ENSG00000115268.10	ENST00000592623.5	873	3	405	-1461	384	17	multi-exon	FALSE	canonical	3	19200	junction_2	653	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAACCATGATTTGCTCGTG	1438776	False	NA	NA	False	NA	NA	NA	1438805	1441955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1438893_1440018_1440254_1440348
transcript_66969.known	chr19	-	1524	3	FSM	ENSG00000119559.17	ENST00000651077.1	1524	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	167.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGGCCGTCTGAATGGT	-1472693	True	NA	-14	True	CATAAA	-12	NA	1479215	1474175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475515_1478773_1478906_1479162
transcript_66975.known	chr19	-	1410	3	FSM	ENSG00000119559.17	ENST00000427685.2	1410	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGTGAGCGGCTCCGTC	-1472694	True	NA	7	True	CATAAA	-33	NA	1479216	1474154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478653_1478906_1479162
transcript_66976.known	chr19	-	1287	3	FSM	ENSG00000119559.17	ENST00000592872.5	1287	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_2	207.5	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCGTCTGAATGGTGC	-1472661	True	NA	-12	True	CATAAA	-14	NA	1479183	1474173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478773_1478906_1479113
transcript_66977.known	chr19	-	1265	3	FSM	ENSG00000119559.17	ENST00000586564.5	1265	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	225.5	411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCTGAATGGTGCCTCTGT	-1472659	True	NA	-6	True	CATAAA	-20	NA	1479181	1474167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478773_1478906_1479139
transcript_66978.known	chr19	-	2243	3	FSM	ENSG00000119559.17	ENST00000585675.6	2243	3	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_2	74	1117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGACGGTGTCGTCCTTAC	-1472693	True	NA	0	True	ATTAAA	-18	NA	1479215	1473200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1475259_1478773_1478906_1479162
transcript_6698.nic	chr1	+	783	7	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	-22	23511	-22	3081	5prime_fragment	FALSE	canonical	3	43	junction_1	18.5060050314005	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGGGTTATTAGTAAAGTT	66930209	False	NA	NA	False	AAGAAA	-9	NA	66930220	66963159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678_66959744_66963087
transcript_66985.known	chr19	-	357	3	FSM	ENSG00000119559.17	ENST00000592605.1	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	165.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTTAGCTGGGCATAGT	-1472697	True	NA	NA	False	AATGAA	-33	NA	1479219	1478412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1478581_1478773_1478906_1479162
transcript_6699.nic	chr1	+	718	6	ISM	ENSG00000198160.15	ENST00000401042.7	1648	14	-22	26920	-22	0	5prime_fragment	FALSE	canonical	3	43	junction_1	19.8736005796635	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACAATATTTTCCCAAAAT	66930209	False	NA	NA	False	AAAAAG	-8	NA	66930220	66959750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66930401_66940027_66940053_66946149_66946296_66958058_66958221_66958850_66958984_66959678
transcript_66990.known	chr19	-	492	2	FSM	ENSG00000119559.17	ENST00000589421.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAACAAAAACAAAAACAA	-1479038	False	NA	NA	False	AATGAA	-11	NA	1479134	1478434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1478906_1479113
transcript_66994.known	chr19	-	911	1	FSM	ENSG00000267317.2	ENST00000591252.2	911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTGCAGTAGCATGAT	NA	False	NA	-4	True	AATAAA	-35	NA	1458580	1457669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1457700_1458600
transcript_66995.known	chr19	+	1360	5	FSM	ENSG00000115255.12	ENST00000233596.8	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_4	13.0072095393286	250	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGCCACGTGTGCGG	1489276	True	NA	27	True	AATAAA	-17	NA	1491180	1497927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1491385_1495293_1495388_1495468_1495608_1496284_1496454_1497173
transcript_67.known	ERCC-00142	+	478	1	FSM	ERCC-00142A	DQ883646	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00142_+_0_500
transcript_67010.known	chr19	-	533	4	FSM	ENSG00000127540.12	ENST00000593029.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	2583.06833049379	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	-1586556	True	NA	-24	True	ATTAAA	-16	NA	1605443	1598048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1598216_1599411_1599561_1602293_1602427_1605359
transcript_67017.known	chr19	-	1299	3	FSM	ENSG00000127540.12	ENST00000591899.8	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	5127	junction_2	187.5	12611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGGTACAAAGTCACACTC	-1586575	True	NA	-24	True	AATAAA	-24	NA	1605462	1597168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1598216_1599411_1599561_1605359
transcript_67018.known	chr19	-	504	3	FSM	ENSG00000127540.12	ENST00000589880.1	504	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2563.5	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCGTGCCCGGATGTTGAT	-1586549	True	NA	-24	True	ATTAAA	-16	NA	1605436	1598048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1598327_1599411_1599561_1605359
transcript_67019.known	chr19	-	2694	5	FSM	ENSG00000071564.17	ENST00000593064.5	2694	5	0	0	0	0	multi-exon	FALSE	canonical	3	320	junction_1	401.802812334608	706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGCAGTCCCCGGGTT	-1619148	False	NA	-8	True	AATAAA	-19	NA	1619209	1609292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1611370_1611703_1611850_1615284_1615521_1615685_1615822_1619110
transcript_67021.known	chr19	-	4735	19	FSM	ENSG00000071564.17	ENST00000262965.12	4735	19	0	0	0	0	multi-exon	TRUE	canonical	3	732	junction_18	141.102110386612	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCAGTCCCCGGGTTC	-1642937	True	NA	-7	True	AATAAA	-20	NA	1652615	1609291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1611850_1615284_1615521_1615685_1615822_1619110_1619235_1619315_1619475_1619779_1619854_1620967_1621047_1621132_1621192_1621837_1621971_1622053_1622224_1622312_1622416_1623950_1624001_1625575_1625709_1627358_1627427_1632037_1632117_1632331_1632406_1646354_1646428_1650176_1650288_1652299
transcript_67024.nnic	chr19	-	967	2	Genic_Genomic	ENSG00000261526.2	novel	1299	1	NA	NA	-29	-11	multi-exon	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTATTTTATCTTCTTGG	-1873763	False	2435	-10	True	TATAAA	-22	NA	1876198	1874881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_1875760_1876109
transcript_67025.known	chr19	-	1299	1	FSM	ENSG00000261526.2	ENST00000565797.2	1299	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTGGCTCATTTTTCT	-1873734	False	2435	1	True	TATAAA	-33	NA	1876169	1874870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_1874900_1876200
transcript_67027.known	chr19	+	2501	7	FSM	ENSG00000227500.10	ENST00000316097.13	2501	7	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_5	37.1797435888594	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	1901916	True	NA	12	True	AATAAA	-21	NA	1905398	1926013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_67028.known	chr19	+	2394	6	FSM	ENSG00000227500.10	ENST00000409472.5	2394	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	107.418061795957	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGGGACCTGCCGCGTTT	1901921	True	NA	12	True	AATAAA	-21	NA	1905403	1926013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1914978_1915027_1917693_1917823_1918126_1918284_1923069_1923188_1924107
transcript_67029.known	chr19	+	1477	6	FSM	ENSG00000227500.10	ENST00000414057.6	1477	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	105.429787062291	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCAAACCCAGCAAACCGG	1901895	True	NA	NA	False	NA	NA	NA	1905377	1925016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_1905440_1917693_1917823_1918126_1918284_1918888_1918991_1923069_1923188_1924107
transcript_67032.nnic	chr19	+	617	2	NNC	ENSG00000213638.6	novel	1599	2	NA	NA	-35	-5694	at_least_one_novel_splicesite	FALSE	canonical	3	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTAGCGCCGGCCGTGGT	1901881	True	NA	NA	False	AATAAA	-16	NA	1905363	1906561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1905440_1906020
transcript_67033.nnic	chr19	+	334	2	NNC	ENSG00000213638.6	novel	1599	2	NA	NA	-27	-446	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAATGATCTGTCTTCTGG	1901889	True	NA	NA	False	AATAAA	-13	NA	1905371	1911809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_1905440_1911543
transcript_67036.known	chr19	-	875	4	FSM	ENSG00000099875.16	ENST00000591142.5	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	168.859573479135	227	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGAGTTTTAGTTTTCTGT	-2033063	False	NA	-3	True	AATAAA	-22	NA	2042140	2037464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2037830_2040133_2040178_2041039_2041205_2041839
transcript_67040.known	chr19	-	3387	5	FSM	ENSG00000172081.14	ENST00000357066.8	3387	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	8.25757228245687	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAAATGGTGTCGTTTTCCTG	-2095581	True	NA	-13	True	AATAAA	-23	NA	2096326	2071035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2073425_2076810_2077014_2078139_2078680_2085174_2085329_2096225
transcript_67042.known	chr19	+	7652	28	FSM	ENSG00000104885.19	ENST00000398665.8	7652	28	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_1	20.1540024174622	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTGAATGGCAGCCT	2158627	True	NA	20	True	AATAAA	-20	NA	2163932	2232578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2164266_2180712_2180757_2185854_2185930_2189731_2189796_2191011_2191241_2193688_2193784_2194514_2194578_2199883_2199940_2202699_2202780_2206728_2206798_2207573_2207681_2208934_2208977_2210399_2210511_2210620_2210856_2211098_2211213_2211750_2211843_2213538_2213641_2213848_2213987_2214470_2214597_2216280_2216766_2216954_2217091_2217771_2217919_2220107_2220223_2221975_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2229784
transcript_67049.nnic	chr19	-	1264	6	NNC	ENSG00000104886.12	novel	1218	6	NA	NA	-102	0	intron_retention	FALSE	canonical	2	219	junction_5	594.887081722237	910	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2236405	False	NA	-5	True	AATAAA	-18	NA	2236432	2233152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235934_2236154
transcript_67050.known	chr19	-	1329	6	FSM	ENSG00000104886.12	ENST00000589791.5	1329	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	682.270503539469	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGATGGCGGTGAAGTG	-2236622	True	NA	-7	True	AATAAA	-16	NA	2236665	2233154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236377
transcript_67055.nnic	chr19	-	1177	5	NIC	ENSG00000104886.12	novel	1218	6	NA	NA	-26	0	intron_retention	FALSE	canonical	1	9	junction_4	732.586172405677	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216514	True	NA	-5	True	AATAAA	-18	NA	2236356	2233152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2236154
transcript_67063.known	chr19	+	2907	7	FSM	ENSG00000104885.19	ENST00000457590.2	2907	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	34.5382235919696	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTATTTTTAGATGGTA	2222517	False	NA	22	True	TATAAA	-17	NA	2222529	2230694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2222560_2223280_2223487_2225387_2225453_2226182_2227128_2227362_2227468_2227736_2228383_2229784
transcript_67064.known	chr19	-	1218	6	FSM	ENSG00000104886.12	ENST00000326631.7	1218	6	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_5	78.1050574546873	6111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216487	True	NA	-5	True	AATAAA	-18	NA	2236329	2233152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2233906_2233997_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_67065.known	chr19	-	1311	5	FSM	ENSG00000104886.12	ENST00000587962.6	1311	5	0	0	0	0	multi-exon	FALSE	canonical	3	1542	junction_4	87.0660668687865	664	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCGGTGAAGTGAAGGAG	-2216484	True	NA	-1	True	AATAAA	-22	NA	2236326	2233148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2234062_2234149_2234241_2235761_2235829_2235922_2235991_2236154
transcript_67066.known	chr19	-	1092	5	FSM	ENSG00000104886.12	ENST00000591099.6	1092	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	698.494273419618	490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGATGGCGGTGAAGTGAA	-2216452	True	NA	-5	True	AATAAA	-18	NA	2236294	2233152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2233906_2233997_2234062_2235761_2235829_2235922_2235991_2236154
transcript_67067.known	chr19	+	1619	9	FSM	ENSG00000104897.10	ENST00000221494.10	1619	9	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	52.9172408105336	5292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGAGTGCACTGATGTC	2219484	True	NA	21	True	ATTAAA	-13	NA	2236823	2248655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732_2244780_2245445_2245556_2246752_2246803_2246881_2247023_2247593_2247663_2247766
transcript_67068.known	chr19	+	759	4	FSM	ENSG00000104897.10	ENST00000589118.5	759	4	0	0	0	0	multi-exon	FALSE	canonical	3	753	junction_1	64.8553947040816	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAAAAAAAAAAAAAGAGC	2219492	True	NA	NA	False	NA	NA	NA	2236831	2245186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2236902_2243381_2243545_2244543_2244616_2244732
transcript_67069.known	chr19	+	3691	15	FSM	ENSG00000005206.17	ENST00000613503.5	3691	15	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	39.0850067813994	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCAGTGTTGCTGAGGC	2324608	True	NA	NA	False	ATTAAA	-13	NA	2328683	2355095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351595_2352945
transcript_67070.known	chr19	+	2583	15	FSM	ENSG00000005206.17	ENST00000610743.4	2583	15	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_14	50.9193039053371	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTGCTGGTGCCACCTGG	2324617	True	NA	29	True	AATAAA	-19	NA	2328692	2353933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897_2341015_2343210_2343293_2343964_2344040_2344361_2344425_2344552_2344653_2345252_2345331_2351433_2351658_2352945
transcript_67078.known	chr19	+	1148	6	FSM	ENSG00000104904.12	ENST00000602676.6	1148	6	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_2	2772.48802341868	16583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGCTCTGTGGTGGTG	2268705	True	NA	111	True	AATAAA	-17	NA	2269519	2273490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271384_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_6708.nic	chr1	+	1265	2	ISM	ENSG00000198160.15	ENST00000371012.6	2420	5	-284	21247	-212	-21247	5prime_fragment	FALSE	canonical	3	22	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTAAATTGCCAAAGAAGTT	NA	False	NA	NA	False	AATAAA	-22	NA	66924682	66926993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_66925096_66926141
transcript_67104.known	chr19	-	621	4	FSM	ENSG00000130332.15	ENST00000585395.6	621	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2154.15448739304	1052	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301127	False	NA	-15	True	AATAAA	-15	NA	2328477	2321520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324193_2325979_2326140_2328386
transcript_6711.known	chr1	-	6193	12	FSM	ENSG00000116704.8	ENST00000235345.6	6193	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	3.67929206269965	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGAGACTAATCCAGAGC	-67054040	True	NA	NA	False	AATAAA	-45	NA	67054148	66999349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67004449_67009084_67009168_67020368_67020448_67021534_67021603_67042235_67042329_67047264_67047368_67049781_67049851_67050432_67050505_67052011_67052080_67052770_67052858_67052955_67052990_67053810
transcript_67113.known	chr19	+	969	6	FSM	ENSG00000104904.12	ENST00000582888.8	969	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	3324.68781090797	4806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGCTGGTTTAAGATGAT	2268719	True	NA	31	True	AATAAA	-20	NA	2269533	2273331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271390_2271443_2271443_2271531_2271781_2271955_2272734_2272821_2272971
transcript_67114.known	chr19	-	575	3	FSM	ENSG00000130332.15	ENST00000587502.2	575	3	0	0	0	0	multi-exon	FALSE	canonical	3	3988	junction_2	303	6422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTCTGAGCCCCGAATCTT	-2301236	True	NA	-14	True	AATAAA	-16	NA	2328586	2321519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324197_2328386
transcript_67115.known	chr19	+	1012	4	FSM	ENSG00000104904.12	ENST00000590943.6	1012	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	3225.4334075697	1827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCTCTGTGGTGG	2269494	False	NA	109	True	AATAAA	-15	NA	2269508	2273488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271781_2271955_2272734_2272821_2272971
transcript_67116.known	chr19	+	1131	4	FSM	ENSG00000104904.12	ENST00000581150.6	1131	4	0	0	0	0	multi-exon	FALSE	canonical	3	6825	junction_3	138.420454493627	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAACGCTCACTCCGAA	2268705	True	NA	-5	True	NA	NA	NA	2269519	2273221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271384_2271955_2272734_2272821_2272971
transcript_67117.known	chr19	+	726	4	FSM	ENSG00000104904.12	ENST00000592727.3	726	4	0	0	0	0	multi-exon	FALSE	canonical	3	6605	junction_1	195.766868153594	564	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTTGTGATACTGAAG	2271256	False	NA	-31	True	AATAAA	-42	NA	2271361	2273269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2271531_2271781_2271955_2272734_2272821_2272971
transcript_67118.known	chr19	+	1357	3	FSM	ENSG00000104904.12	ENST00000593012.1	1357	3	0	0	0	0	multi-exon	FALSE	canonical	3	7084	junction_2	30	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTTTATTGCTGGTTTAA	2268734	True	NA	25	True	AATAAA	-14	NA	2269548	2273325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2269745_2271384_2271955_2272734
transcript_67119.known	chr19	-	512	4	FSM	ENSG00000130332.15	ENST00000585409.2	512	4	0	0	0	0	multi-exon	FALSE	canonical	3	673	junction_2	1604.88566570955	12777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTGAGCCCCGAATCT	-2301261	True	NA	-15	True	AATAAA	-15	NA	2328611	2321520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2321823_2324124_2324193_2328386_2328478_2328560
transcript_67120.known	chr19	-	543	2	FSM	ENSG00000130332.15	ENST00000591745.1	543	2	0	0	0	0	multi-exon	FALSE	canonical	3	2878	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTCCGTTTCCTCATTTG	-2301237	True	NA	NA	False	NA	NA	NA	2328587	2327961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2328478_2328560
transcript_67121.known	chr19	+	2459	8	FSM	ENSG00000005206.17	ENST00000618220.4	2459	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_3	27.6095221669212	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCCTGGCATTGTGGTGT	2324620	True	NA	NA	False	AATACA	-7	NA	2328695	2342503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2328776_2334601_2334722_2337442_2337626_2338751_2338842_2339068_2339209_2339823_2339967_2340075_2340173_2340897
transcript_67127.known	chr19	-	631	3	FSM	ENSG00000099800.8	ENST00000591871.1	631	3	0	0	0	0	multi-exon	FALSE	canonical	2	106	junction_2	2217	1453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAACCTCTTTATTTCCC	-2427473	False	NA	-18	True	AATAAA	-16	NA	2427538	2426564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2427047_2427255_2427325_2427458
transcript_67131.known	chr19	-	1664	3	FSM	ENSG00000099800.8	ENST00000215570.8	1664	3	0	0	0	0	multi-exon	FALSE	canonical	3	4540	junction_1	56.5	30946	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCTGCTTGATCCGCTGG	-2364412	True	NA	-2	True	AATAAA	-38	NA	2427586	2425624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2427047_2427255_2427325_2427413
transcript_67132.known	chr19	-	4634	12	FSM	ENSG00000176619.13	ENST00000325327.4	4634	12	0	0	0	0	multi-exon	FALSE	canonical	3	1184	junction_8	84.5139726332157	368	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTGCCTCTGAGTTTAT	-2434836	True	NA	-7	True	AATAAA	-14	NA	2456959	2428165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2430953_2431547_2431659_2431782_2431903_2432415_2432524_2433825_2434106_2434294_2434516_2434787_2434914_2435000_2435172_2438162_2438289_2438374_2438532_2444403_2444541_2456669
transcript_67135.known	chr19	+	750	4	FSM	ENSG00000099860.9	ENST00000585359.1	750	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	30.5759527879163	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGAACCCCCTCCCC	2475074	False	NA	NA	False	AATACA	-4	NA	2476145	2477657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2476403_2476528_2476629_2477028_2477252_2477487
transcript_67137.known	chr19	+	765	3	FSM	ENSG00000099860.9	ENST00000587345.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCCCCGGGAGAGGGAGGC	2475076	False	NA	NA	False	NA	NA	NA	2476147	2477436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2476403_2476528_2476631_2477028
transcript_6714.known	chr1	+	697	5	FSM	ENSG00000081985.13	ENST00000441640.4	697	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.707106781186548	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTGCATAGTGGCTTT	NA	False	NA	NA	False	AATAAA	-19	NA	67326768	67338760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_67326850_67328199_67328385_67329586_67329730_67330659_67330811_67338623
transcript_67143.known	chr19	-	4193	5	FSM	ENSG00000176533.13	ENST00000382159.8	4193	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_4	17.6776695296637	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCTCTGGGCTGTTC	-2700083	True	NA	-8	True	AATAAA	-20	NA	2702694	2511218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2515148_2520607_2520726_2555148_2555189_2646223_2646281_2702645
transcript_67151.nnic	chr19	-	438	4	NNC	ENSG00000176533.13	novel	4193	5	NA	NA	-13	-23185	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	74.4057942785521	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATACCAGTTTACCATCCAT	-2700096	True	NA	NA	False	AATAAA	-17	NA	2702707	2538177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_2538457_2555148_2555189_2646223_2646281_2702645
transcript_67153.nic	chr19	-	1099	2	ISM	ENSG00000176533.13	ENST00000382159.8	4193	5	-13	134025	-13	-130251	5prime_fragment	FALSE	canonical	3	132	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAGAGAGAGAGAGAAAAG	-2700096	True	NA	NA	False	NA	NA	NA	2702707	2645243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_2646281_2702645
transcript_67156.known	chr19	-	2940	2	FSM	ENSG00000141873.11	ENST00000455372.2	2940	2	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTCCACACGGGCA	-2734149	True	NA	-37	True	AATAAA	-18	NA	2740028	2734523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2737380_2739944
transcript_67157.known	chr19	-	572	2	FSM	ENSG00000141873.11	ENST00000590875.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCAGCCCAAGCCGCCACC	-2734138	True	NA	NA	False	NA	NA	NA	2740017	2737277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2737777_2739944
transcript_67158.known	chr19	-	1367	3	FSM	ENSG00000141873.11	ENST00000269740.9	1367	3	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	23.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGTGGCCATGTCAACC	-2734138	True	NA	-3	True	TTTAAA	-32	NA	2740017	2732523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2733486_2737047_2737380_2739944
transcript_67160.known	chr19	-	2255	12	FSM	ENSG00000104969.11	ENST00000678595.1	2255	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	242.878978808598	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATAGGCGTTGTGACCTC	-2769260	True	NA	-24	True	NA	NA	NA	2783327	2754734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2755934_2757336_2757448_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2783232
transcript_67165.known	chr19	-	2854	12	FSM	ENSG00000104969.11	ENST00000676943.1	2854	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_11	221.574941149613	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACCTCTGTCTGTCTTCG	-2769174	True	NA	-12	True	AATAAA	-9	NA	2783241	2754722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2755934_2757336_2757458_2757692_2757783_2759256_2759295_2761459_2761523_2762505_2762645_2763652_2763758_2765185_2765286_2767135_2767221_2767579_2767687_2768968_2769092_2782569
transcript_67168.known	chr19	+	4761	13	FSM	ENSG00000172009.15	ENST00000307741.11	4761	13	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_8	49.9407287580877	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGGAACCTGTATGTT	2775888	True	NA	NA	False	AATAAA	-18	NA	2785502	2815807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2785679_2790420_2790634_2794763_2794913_2796080_2796189_2799688_2799792_2805015_2805177_2806916_2807053_2807441_2807809_2808242_2808445_2810303_2810491_2810639_2810769_2811597_2811735_2813114
transcript_67185.known	chr19	+	8504	4	FSM	ENSG00000186300.12	ENST00000334241.9	8504	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	11.8415464455544	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTTAAAAAAAAAAGCTTCAC	2840543	True	NA	NA	False	ATTAAA	-16	NA	2841474	2860471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2841576_2850586_2850714_2851467_2851652_2852379
transcript_67192.known	chr19	+	1970	4	FSM	ENSG00000171970.14	ENST00000306908.10	1970	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	6.12825877028341	106	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATTCTCTAAGTCCTCTTT	2899465	True	NA	NA	False	AATAAA	-17	NA	2900927	2918473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2901049_2915521_2915649_2916077_2916250_2916923
transcript_67195.known	chr19	-	788	5	FSM	ENSG00000253392.3	ENST00000654521.1	788	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.433012701892219	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGTTCACTGTCTTCC	NA	False	NA	NA	False	AGTAAA	-26	NA	2926817	2908370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2908727_2915146_2915287_2917004_2917107_2919016_2919175_2926785
transcript_67196.known	chr19	-	2040	4	FSM	ENSG00000175691.9	ENST00000314531.5	2040	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	7.40870359029762	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTATATTTTGTAATT	-2944755	False	NA	0	True	AATAAA	-23	NA	2944971	2933217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_2934816_2936523_2936705_2939280_2939408_2944837
transcript_67198.known	chr19	+	1977	17	FSM	ENSG00000104953.20	ENST00000246112.9	1977	17	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	3.94443833137241	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGTGTGGACGCGTCCTGTC	2977403	True	NA	4	True	AATAAA	-17	NA	2977563	2995179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2977611_2978197_2978285_2980099_2980183_2981537_2981584_2982147_2982190_2986828_2986892_2986982_2987239_2987355_2987373_2987723_2987791_2987897_2987975_2988090_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_67202.known	chr19	+	456	3	FSM	ENSG00000104953.20	ENST00000482627.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	2977389	True	NA	3	True	ATTAAA	-44	NA	2977549	2980407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2977611_2978197_2978285_2980099
transcript_67203.nic	chr19	+	497	3	ISM	ENSG00000104953.20	ENST00000453329.5	582	7	-20	6754	-20	0	5prime_fragment	FALSE	canonical	1	3	junction_1	5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGATTTGTTGGCATTCA	NA	False	NA	3	True	ATTAAA	-44	NA	2977517	2980407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_2977620_2978197_2978285_2980099
transcript_67204.known	chr19	+	1559	8	FSM	ENSG00000104953.20	ENST00000497878.5	1559	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.87280136888413	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACGTGTAATAAAGCACCCGG	2987395	False	NA	-24	True	NA	NA	NA	2987410	2995151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_2987439_2987723_2988129_2989060_2989314_2989534_2989786_2991842_2991985_2993431_2993583_2994018_2994096_2994899
transcript_67217.nic	chr19	-	1206	5	ISM	ENSG00000065717.15	ENST00000455444.6	2253	18	22893	5	2638	0	3prime_fragment	FALSE	canonical	3	88	junction_4	9.12414379544733	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGCACTTCTCTCTCGGGC	NA	False	NA	-12	True	AATAAA	-15	NA	3006238	2997643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_2997956_3000646_3000724_3002352_3002504_3005436_3005585_3005720
transcript_67222.known	chr19	-	1798	7	FSM	ENSG00000104964.15	ENST00000327141.9	1798	7	0	0	0	0	multi-exon	FALSE	canonical	3	2075	junction_2	205.538858180691	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-3062276	True	NA	-10	True	AATAAA	-16	NA	3062495	3052909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062173
transcript_67224.known	chr19	-	1884	7	FSM	ENSG00000104964.15	ENST00000221561.12	1884	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	893.732249240976	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTGTCCCTGCCTCT	-3063078	True	NA	-10	True	AATAAA	-16	NA	3063107	3052909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3054041_3054119_3054195_3055663_3055727_3056311_3056357_3057678_3057743_3061159_3061258_3062699
transcript_67234.known	chr19	+	4190	7	FSM	ENSG00000088256.9	ENST00000078429.9	4190	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	6.69991708074726	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGCGGCCCCCTTCTGG	3092347	True	NA	13	True	AATAAA	-14	NA	3094361	3123999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3094788_3110148_3110334_3113329_3113485_3114943_3115073_3118923_3119054_3119205_3119360_3120988
transcript_67236.known	chr19	+	3680	15	FSM	ENSG00000125912.11	ENST00000246117.9	3680	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_11	94.3225306908077	230	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGTGTTTGGTCTGGGGGC	3179440	True	NA	35	True	AATAAA	-21	NA	3185929	3209575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3186215_3192469_3192661_3193283_3193429_3196182_3196278_3198816_3198898_3201522_3201627_3203755_3203845_3204004_3204145_3204572_3204752_3205938_3206027_3206151_3206191_3206261_3206426_3207197_3207252_3207390_3207470_3207628
transcript_67238.nic	chr19	+	783	4	ISM	ENSG00000161082.13	ENST00000292672.7	1896	13	61213	0	1112	0	3prime_fragment	FALSE	canonical	2	12	junction_2	4.02768199119819	43	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	3285611	True	NA	NA	False	AATAAA	-17	NA	3285873	3297076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3286026_3290230_3290375_3293318_3293487_3296757
transcript_67239.nic	chr19	+	727	4	ISM	ENSG00000161082.13	ENST00000334293.10	1591	13	60404	-60	1127	0	3prime_fragment	FALSE	canonical	2	8	junction_1	5.43650214343336	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGACTCTTCTCTTTCT	3285626	True	NA	NA	False	AATAAA	-17	NA	3285888	3297076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3286026_3290271_3290375_3293318_3293487_3296757
transcript_67243.nic	chr19	+	848	5	ISM	ENSG00000141905.19	ENST00000590282.5	1558	10	68381	-58	-82	-9	3prime_fragment	FALSE	canonical	0	0	junction_3	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGAAGAAGAAGAAGAAAT	3434498	True	NA	26	True	AAGAAA	-12	NA	3434963	3462958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3435208_3449013_3449140_3452481_3452667_3456549_3456636_3462751
transcript_67244.known	chr19	+	977	4	FSM	ENSG00000141905.19	ENST00000589537.1	977	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCACCTCTCCCCGGGCCC	3434580	True	NA	NA	False	NA	NA	NA	3435045	3463255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3435208_3449013_3449140_3452481_3452667_3462751
transcript_67246.nnic	chr19	-	926	4	NNC	ENSG00000095932.7	novel	1312	4	NA	NA	-200	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	9.84321537348893	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	-3479266	False	NA	-17	True	ATTAAA	-21	NA	3479288	3474406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_3474997_3478418_3478479_3478817_3478930_3479124
transcript_67247.known	chr19	-	1312	4	FSM	ENSG00000095932.7	ENST00000215531.6	1312	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	11.4309521329882	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGAGTCTCGCTCTGTCA	-3480503	True	NA	NA	False	NA	NA	NA	3480525	3473985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3474997_3478418_3478479_3478817_3478930_3480396
transcript_67249.known	chr19	-	820	3	FSM	ENSG00000095932.7	ENST00000587847.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	7	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATGTCTACTGAACAGAA	-3478834	True	NA	-118	True	NA	NA	NA	3479088	3474507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3474997_3478418_3478479_3478817
transcript_6725.known	chr1	-	3482	8	FSM	ENSG00000142864.15	ENST00000370995.6	3482	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1222.76144485358	2100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAACAATCAAATAGGATC	-67331830	True	NA	-32	True	AATAAA	-34	NA	67430386	67411037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424978_67425082_67425224_67426134_67426286_67429987
transcript_67250.known	chr19	-	660	2	FSM	ENSG00000095932.7	ENST00000591708.1	660	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGGCTCCTGTCATCTCT	-3478466	False	254	-17	True	ATTAAA	-21	NA	3478488	3474406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3474997_3478418
transcript_67254.known	chr19	+	1585	10	FSM	ENSG00000064961.19	ENST00000333651.11	1585	10	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	132.281685975211	121	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGAGTGTGTAAGCTT	3555611	True	NA	22	True	AATAAA	-24	NA	3572943	3579083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3572995_3573291_3573348_3573691_3573801_3574382_3574587_3575539_3575661_3576260_3576308_3576552_3576626_3576891_3577108_3577980_3578114_3578508
transcript_6726.known	chr1	-	1621	8	FSM	ENSG00000142864.15	ENST00000370990.5	1621	8	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_4	1230.14789222056	2004	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGCTTTCACTTCATTTG	-67331816	True	NA	NA	False	AATATA	-24	NA	67430372	67412866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67413264_67415165_67415340_67420008_67420187_67424199_67424323_67424887_67424960_67425082_67425224_67426134_67426286_67429987
transcript_67260.known	chr19	-	2176	11	FSM	ENSG00000011132.12	ENST00000316757.4	2176	11	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_8	15.0229823936527	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTAAGGTTGTGGGTTCTGT	-3759527	True	NA	97	True	ATTAAA	-16	NA	3761692	3750771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3751098_3751188_3751330_3751433_3751554_3752507_3752721_3752819_3752991_3753764_3753927_3754018_3754106_3754194_3754341_3759560_3759601_3759688_3760302_3761535
transcript_6727.known	chr1	+	1352	4	FSM	ENSG00000116717.13	ENST00000370986.9	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	13.490737563232	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTATTGTGTGCTCTTG	67683469	True	NA	12	True	AATAAA	-22	NA	67685200	67688334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_67685539_67686024_67686127_67686349_67686588_67687660
transcript_67271.nnic	chr19	-	1336	3	NNC	ENSG00000011132.12	novel	725	2	NA	NA	-8	1711	intron_retention	FALSE	canonical	0	0	junction_1	62.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGCTTGGTTATTCAT	-3759535	False	NA	-6	True	AATAAA	-15	NA	3761700	3757900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_3757981_3759210_3760302_3761535
transcript_67273.known	chr19	+	608	3	FSM	ENSG00000183617.5	ENST00000330133.5	608	3	0	0	0	0	multi-exon	FALSE	canonical	3	405	junction_2	52	3996	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCCCTTGGTATTGTCTG	3758873	True	NA	22	True	AATAAA	-22	NA	3762681	3767565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3762819_3765165_3765332_3767260
transcript_67274.known	chr19	-	1019	3	FSM	ENSG00000105278.12	ENST00000586578.1	1019	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	37	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3868980	False	NA	0	True	AATAAA	-25	NA	3869015	3851804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3852615_3855401_3855560_3868964
transcript_67275.nic	chr19	-	1205	3	NIC	ENSG00000105278.12	novel	1019	3	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	33	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATTTCATGTAATTTT	-3866851	True	NA	0	True	AATAAA	-25	NA	3869064	3851804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_3852615_3855401_3855697_3868964
transcript_67277.known	chr19	-	870	2	FSM	ENSG00000105278.12	ENST00000439086.2	870	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTGAAATGTGAATTTCAT	-3866819	True	NA	-8	True	AATAAA	-17	NA	3869032	3851812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3852615_3868964
transcript_67278.known	chr19	+	4971	13	FSM	ENSG00000167654.18	ENST00000450849.7	4971	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	8.82664841387841	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGAGGTTTGTTCCTTTTGA	3879326	True	NA	14	True	AATAAA	-18	NA	3880684	3928082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267_3908371_3909485_3909618_3910802_3910890_3913757_3913857_3917741_3917778_3918805_3918878_3920765_3920799_3924582
transcript_67280.nic	chr19	+	1721	6	ISM	ENSG00000167654.18	ENST00000450849.7	4971	13	-62	19065	-62	3422	5prime_fragment	FALSE	canonical	3	19	junction_1	6.05309838016862	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAGCAAGGCCTAG	NA	False	NA	NA	False	NA	NA	NA	3880622	3909017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_3881009_3885726_3885845_3902486_3902546_3905433_3905656_3907733_3907920_3908267
transcript_67284.known	chr19	+	1139	8	FSM	ENSG00000077009.14	ENST00000616156.4	1139	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	213.303750074673	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTTGGTGTCTACCGTG	3933075	False	NA	13	True	AGTAAA	-18	NA	3933102	3942414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_3933179_3933457_3933698_3936574_3936666_3937224_3937289_3938602_3938760_3939899_3939972_3941070_3941178_3942082
transcript_6729.known	chr1	+	902	3	FSM	ENSG00000116717.13	ENST00000370985.4	902	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	76	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAAAATAAGTCAAAAG	67683469	True	NA	38	True	AATGAA	-19	NA	67685200	67687986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_67685539_67686349_67686588_67687660
transcript_67296.nic	chr19	-	768	2	ISM	ENSG00000167657.14	ENST00000596311.5	671	4	26	4816	2	-4507	5prime_fragment	FALSE	canonical	3	258	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCCTGTGTTAATCCTCT	-3960457	True	NA	NA	False	TTTAAA	-11	NA	3971097	3969137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_3969830_3971021
transcript_67298.nic	chr19	-	590	2	ISM	ENSG00000167657.14	ENST00000596311.5	671	4	26	4994	2	-4685	5prime_fragment	FALSE	canonical	3	258	junction_1	0	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAAAAAAAATTAACCAGGT	-3960457	True	NA	NA	False	AATAAA	-3	NA	3971097	3969315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_3969830_3971021
transcript_6730.nic	chr1	+	1129	3	ISM	ENSG00000116717.13	ENST00000370986.9	1352	4	708	1	233	0	3prime_fragment	FALSE	canonical	3	130	junction_1	15	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTTATTGTGTGCTCTT	67685870	False	NA	11	True	AATAAA	-21	NA	67685908	67688333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_67686127_67686349_67686588_67687660
transcript_67300.known	chr19	-	3158	15	FSM	ENSG00000167658.16	ENST00000309311.7	3158	15	0	0	0	0	multi-exon	FALSE	canonical	3	6884	junction_14	759.65372414821	14876	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTCTGCATTTTTCAC	-3874955	True	NA	-15	True	AATAAA	-17	NA	3985463	3976055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_3976748_3977214_3977348_3977427_3977611_3977818_3978173_3979328_3979437_3979807_3980067_3980513_3980710_3980840_3980980_3981338_3981453_3981946_3982053_3982245_3982425_3982806_3983019_3983109_3983292_3984135_3984351_3985377
transcript_67301.known	chr19	+	3069	11	FSM	ENSG00000105229.7	ENST00000262971.3	3069	11	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_9	9.42814934120159	126	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCGTCCGCTTTTCTG	3998410	True	NA	17	True	AATAAA	-20	NA	4007735	4039386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4007788_4012922_4013350_4024035_4024121_4028145_4028188_4028509_4028601_4028719_4028849_4028930_4029037_4033099_4033174_4033419_4033581_4037373_4037505_4037615
transcript_67302.nic	chr19	-	1604	8	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	20.2192068719476	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180962	True	NA	-4	True	AATAAA	-19	NA	4182607	4174108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_67304.known	chr19	-	1600	8	FSM	ENSG00000077463.15	ENST00000337491.7	1600	8	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_2	10.5482371096998	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180918	True	NA	-4	True	AATAAA	-19	NA	4182563	4174108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4180781_4180910_4182473
transcript_67308.nic	chr19	-	1488	7	NIC	ENSG00000077463.15	novel	1600	8	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_6	29.1590466236467	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180974	False	NA	-4	True	AATAAA	-19	NA	4182619	4174108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4174947_4175027_4175112_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_67309.known	chr19	-	1473	7	FSM	ENSG00000077463.15	ENST00000600938.5	1473	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	24.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTCAGTGTGTTTACTTTA	-4180920	True	NA	-5	True	AATAAA	-18	NA	4182565	4174109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_67311.known	chr19	-	827	7	FSM	ENSG00000077463.15	ENST00000597896.5	827	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	25.1925915035882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCGGTCCCCAGCTGAC	-4180855	True	NA	NA	False	NA	NA	NA	4182500	4174635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175679_4175761_4175841_4175938_4177078_4177139_4180781_4180910_4182473
transcript_67315.known	chr19	-	1372	6	FSM	ENSG00000077463.15	ENST00000599365.5	1372	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	32.0287370965513	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGTGTTTACTTTAT	-4180899	True	NA	-4	True	AATAAA	-19	NA	4182544	4174108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4174947_4175027_4175152_4175841_4175938_4177078_4177139_4179103_4179287_4182473
transcript_67317.known	chr19	-	371	2	FSM	ENSG00000077463.15	ENST00000594341.1	371	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGAATTCCAGACCAGC	-4180901	True	NA	NA	False	NA	NA	NA	4182546	4180611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4180910_4182473
transcript_67318.nic	chr19	-	903	2	ISM	ENSG00000077463.15	ENST00000594279.5	1507	8	-36	5971	-36	500	5prime_fragment	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGC	-4180670	False	1645	NA	False	NA	NA	NA	4182315	4180111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_4180910_4182210
transcript_6732.known	chr1	+	651	2	FSM	ENSG00000116717.13	ENST00000648742.1	651	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAGAAAAATAAGTCAAAAG	67683482	True	NA	38	True	AATGAA	-19	NA	67685213	67687986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_67685539_67687660
transcript_67321.known	chr19	+	1158	5	FSM	ENSG00000105246.6	ENST00000221847.6	1158	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.78535710713571	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCCAGGTGTGATGTTGC	4229436	True	NA	5	True	AATAAA	-1	NA	4229522	4237528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4229618_4231190_4231324_4233128_4233308_4234666_4234825_4236935
transcript_67324.known	chr19	+	1431	8	FSM	ENSG00000105248.16	ENST00000262962.12	1431	8	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	24.3595516194786	399	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCGCCTGGGCCCCTTCTCTC	4245002	True	NA	14	True	AATAAA	-15	NA	4247079	4269088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4247171_4249227_4249329_4251026_4251172_4254354_4254490_4258241_4258424_4261993_4262115_4267623_4267775_4268583
transcript_67332.nic	chr19	+	550	3	ISM	ENSG00000105251.11	ENST00000593383.1	558	4	1668	-69	320	0	3prime_fragment	FALSE	canonical	2	17	junction_1	0.5	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTAGTGTCCTTTCTGG	4284734	False	NA	2	True	AATAAA	-13	NA	4284750	4290722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_4284905_4288242_4288363_4290446
transcript_67333.known	chr19	-	1212	5	FSM	ENSG00000167664.8	ENST00000595645.5	1212	5	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_3	1.4790199457749	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	-4302324	True	NA	NA	False	AATAAA	-17	NA	4302393	4292231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4292886_4294578_4294681_4294774_4294817_4297985_4298346_4302339
transcript_67335.known	chr19	-	489	4	FSM	ENSG00000167664.8	ENST00000600114.5	489	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.35702260395516	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATCCCAGGAGACCTCAA	-4302363	False	NA	NA	False	NA	NA	NA	4302385	4292598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4292886_4294566_4294681_4294774_4294817_4302339
transcript_67336.nnic	chr19	-	896	4	NNC	ENSG00000167664.8	novel	1212	5	NA	NA	-2915	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	3.09120616516523	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAAAGCTGGTGTTTGTGGC	NA	False	NA	NA	False	AATAAA	-17	NA	4305346	4292231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_4292886_4294578_4294681_4294774_4294817_4305248
transcript_67343.known	chr19	+	1634	13	FSM	ENSG00000105255.11	ENST00000597590.5	1634	13	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_11	120.106521009015	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCACCTCTTAATAAAGGTC	4300609	True	NA	-20	True	NA	NA	NA	4304675	4323806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323147_4323347_4323437_4323532
transcript_67346.known	chr19	+	1833	13	FSM	ENSG00000105255.11	ENST00000221856.11	1833	13	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_6	31.770881147505	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGAGGCCGCGGTGCTG	4300531	True	NA	10	True	AATAAA	-15	NA	4304597	4323836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4304762_4305945_4306042_4306197_4306330_4307881_4307984_4310272_4310296_4310474_4310597_4311841_4312052_4317181_4317281_4318345_4318506_4318871_4318952_4322985_4323238_4323347_4323437_4323532
transcript_6735.known	chr1	-	4395	4	FSM	ENSG00000172380.6	ENST00000370982.4	4395	4	0	0	0	0	multi-exon	FALSE	canonical	3	263	junction_2	24.9042611258038	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTCTTCCCCTTTCCCTT	-67831555	True	NA	-16	True	AATAAA	-15	NA	67833467	67701474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_67705577_67707593_67707713_67777457_67777508_67833343
transcript_67367.nic	chr19	-	792	7	ISM	ENSG00000178078.12	ENST00000594605.6	1376	13	11362	0	-81	0	3prime_fragment	FALSE	canonical	3	49	junction_2	18.7409237291608	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4327422	False	NA	-6	True	ATTAAA	-16	NA	4327465	4324042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315
transcript_67381.nic	chr19	-	642	6	NIC	ENSG00000178078.12	novel	1376	13	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	35.366650958212	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4327422	False	NA	-6	True	ATTAAA	-16	NA	4327465	4324042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4324198_4324454_4324530_4325215_4325309_4326941_4327008_4327123_4327227_4327315
transcript_67389.nic	chr19	-	717	6	NIC	ENSG00000178078.12	novel	1508	13	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	34.7597468345211	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4327422	False	NA	-6	True	ATTAAA	-16	NA	4327465	4324042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4324198_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315
transcript_67399.nic	chr19	-	567	5	NIC	ENSG00000178078.12	novel	1508	13	NA	NA	-81	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	45.5597135636299	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4327422	False	NA	-6	True	ATTAAA	-16	NA	4327465	4324042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_4324198_4325215_4325309_4326941_4327008_4327123_4327227_4327315
transcript_67403.known	chr19	-	1376	13	FSM	ENSG00000178078.12	ENST00000594605.6	1376	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	26.7907270441762	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338113	True	NA	-6	True	ATTAAA	-16	NA	4338827	4324042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4324198_4324454_4324530_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_67404.known	chr19	-	1508	13	FSM	ENSG00000178078.12	ENST00000600324.5	1508	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	30.2016371888825	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATGTGTCTGGCTTGGCT	-4338107	True	NA	-6	True	ATTAAA	-16	NA	4338821	4324042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4324198_4324454_4324668_4325215_4325309_4325395_4325546_4326941_4327008_4327123_4327227_4327315_4327386_4328674_4328810_4329960_4330062_4332021_4332079_4333693_4333817_4333972_4334045_4338651
transcript_67405.known	chr19	+	1614	13	FSM	ENSG00000008382.16	ENST00000599840.6	1614	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	25.8009205262138	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCACGCTGGTCTCCC	4341286	True	NA	7	True	AATAAA	-16	NA	4343561	4360078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4343601_4343707_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4358082_4358173_4359162_4359256_4359915
transcript_67406.known	chr19	+	1578	11	FSM	ENSG00000008382.16	ENST00000596722.5	1578	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	37.0487516658794	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCAGCAGCCAGCCACG	4341329	False	NA	-3	True	AATAAA	-6	NA	4343604	4360068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4343995_4345744_4345982_4352896_4353030_4354044_4354130_4354323_4354421_4354948_4355022_4355096_4355174_4357252_4357422_4357514_4357586_4359162_4359256_4359915
transcript_67407.known	chr19	+	379	3	FSM	ENSG00000008382.16	ENST00000601877.1	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	11	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCGTGGCCAGGCCCAGT	4352972	False	NA	3	True	AATAAA	-13	NA	4352989	4354577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4353030_4354044_4354130_4354323
transcript_67408.known	chr19	-	2516	10	FSM	ENSG00000141985.9	ENST00000269886.7	2516	10	0	0	0	0	multi-exon	FALSE	canonical	3	657	junction_6	45.1830296996506	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCTTGCCTCGTCTTGGT	-4391791	True	NA	-6	True	ATTAAA	-15	NA	4400547	4360369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4361797_4362328_4362386_4362611_4362737_4363369_4363474_4363719_4363879_4364087_4364222_4365481_4365626_4366500_4366574_4366925_4366995_4400323
transcript_67409.known	chr19	+	3366	15	FSM	ENSG00000167670.16	ENST00000301280.10	3366	15	0	0	0	0	multi-exon	FALSE	canonical	3	535	junction_4	79.1241919712425	251	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTCTGTCTGTCTTTTC	4395833	True	NA	27	True	TATAAA	-19	NA	4402639	4443397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4402815_4405911_4405963_4408902_4409760_4418019_4418077_4422565_4422796_4423334_4423396_4423805_4423875_4428663_4428891_4429437_4429607_4429707_4429789_4430548_4430642_4431951_4432208_4433069_4433540_4442244_4442342_4442924
transcript_67411.known	chr19	-	1915	11	FSM	ENSG00000167671.12	ENST00000301281.11	1915	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	10.9311481556148	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTGGTTCTCCGTTGA	-4457528	True	NA	NA	False	AATAAA	-18	NA	4457794	4445005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4445624_4446048_4446198_4446282_4446414_4446499_4446720_4446835_4446921_4447549_4447626_4448317_4448416_4452363_4452493_4453457_4453523_4453929_4454094_4457614
transcript_67417.known	chr19	-	2605	2	FSM	ENSG00000171236.10	ENST00000306390.7	2605	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCCTACATCTGTGGTC	-4540013	False	NA	NA	False	AATAAA	-17	NA	4540036	4536401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4538952_4539981
transcript_67419.nnic	chr19	+	805	3	Antisense	novelGene_ENSG00000167680.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	1	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCCTCTTTACCCTGTTT	NA	False	NA	NA	False	AATAAA	-16	NA	4580510	4586062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_4580773_4585411_4585583_4585690
transcript_67425.known	chr19	-	990	6	FSM	ENSG00000074842.8	ENST00000262947.8	990	6	0	0	0	0	multi-exon	TRUE	canonical	3	777	junction_5	54.4301387100933	1979	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCACAGCCTGGGCCCTCC	-4656128	True	NA	-47	True	AATAAA	-20	NA	4670342	4657544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4658085_4659930_4660004_4660668_4660751_4664875_4664938_4668594_4668646_4670160
transcript_67426.known	chr19	-	2025	13	FSM	ENSG00000142002.18	ENST00000597849.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_2	14.4997605344211	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGAGACTGTCTGTGGTCGC	-4720536	True	NA	-5	True	AATAAA	-35	NA	4723750	4694316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_67427.known	chr19	-	4273	22	FSM	ENSG00000142002.18	ENST00000262960.14	4273	22	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_4	24.7546692725565	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCTGCCTGAGGTTCCTT	-4720628	True	NA	-4	True	ATTAAA	-21	NA	4723842	4675226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4676657_4679834_4679947_4682695_4682839_4683476_4683630_4684662_4684810_4685625_4685772_4688756_4688893_4689569_4689723_4690877_4690958_4694660_4694824_4695377_4695556_4697550_4697652_4700215_4700278_4702026_4702156_4702602_4702717_4703885_4704055_4704130_4704305_4705857_4705971_4714080_4714338_4719850_4719942_4722498_4722552_4723673
transcript_67428.known	chr19	+	630	4	FSM	ENSG00000176840.13	ENST00000655494.2	631	4	1	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAAGATCCTTCTTCTAG	4769018	True	NA	NA	False	AATAAA	-44	NA	4769132	4772560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4769170_4769283_4769352_4769629_4769758_4772163
transcript_67429.known	chr19	+	739	3	FSM	ENSG00000176840.13	ENST00000317292.9	745	3	1	5	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACACACAGGAAGATCCTTCT	4769018	True	NA	NA	False	AATAAA	-39	NA	4769132	4772555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4769352_4769629_4769758_4772163
transcript_6743.nnic	chr1	-	1039	3	NNC	ENSG00000172380.6	novel	4395	4	NA	NA	0	-52398	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTGTATAATGAGCATGCA	-67831555	True	NA	NA	False	AATAAA	-34	NA	67833467	67829535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_67830299_67831818_67831971_67833343
transcript_67430.known	chr19	-	418	2	FSM	ENSG00000268536.2	ENST00000598782.2	627	2	111	98	111	-98	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACATGGGGATAAATAGAGAA	NA	False	NA	NA	False	AATAAA	-13	NA	4791207	4785119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4785528_4791197
transcript_67435.known	chr19	-	1535	8	FSM	ENSG00000105355.9	ENST00000585479.5	1535	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	231.291317323819	288	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTAAGGCTCTCAAAACGG	-4860162	True	NA	NA	False	NA	NA	NA	4867694	4839061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_4839534_4844667_4844794_4847690_4847891_4852015_4852302_4859589_4859673_4859825_4860025_4861328_4861412_4867608
transcript_67442.known	chr19	+	2651	17	FSM	ENSG00000276043.5	ENST00000615884.4	2651	17	0	0	0	0	multi-exon	TRUE	canonical	3	168	junction_1	66.75222374573	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATCTATACATTTTCAGGA	4908122	True	NA	NA	False	AAAAAG	-36	NA	4910145	4960961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_4910247_4910875_4911039_4929221_4929477_4930715_4930877_4932740_4932957_4941527_4941629_4941744_4941932_4944131_4944256_4944342_4944451_4945860_4945966_4947104_4947212_4950610_4950774_4950858_4950997_4954349_4954489_4954649_4954823_4956708_4956814_4960656
transcript_67445.nnic	chr19	-	830	2	NNC	ENSG00000105426.18	novel	5443	31	NA	NA	54393	-39	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTTGGGTCCAAGACACC	-5165576	False	NA	-39	True	AATAAA	-13	NA	5165623	5158533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_5159105_5165364
transcript_67446.nnic	chr19	+	802	2	Genic_Genomic	ENSG00000274447.1	novel	450	1	NA	NA	-853	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGCCTCAGTTTCCCTCC	5293350	True	NA	NA	False	AATAAA	-43	NA	5293393	5294696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_+_5293646_5294146
transcript_67447.known	chr19	-	603	2	FSM	ENSG00000223573.7	ENST00000646160.1	603	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCCTGCTTTCTCTCTTTC	-5567927	True	NA	NA	False	AATAAA	-23	NA	5567953	5562635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5562950_5567664
transcript_67448.known	chr19	-	279	1	FSM	ENSG00000233270.1	ENST00000435815.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	64	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGATCAATGAAGTGAGA	NA	False	NA	NA	False	NA	NA	NA	5576938	5576659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5576700_5576900
transcript_6745.known	chr1	-	2037	12	FSM	ENSG00000116729.14	ENST00000354777.6	2037	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	5.88175495258975	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTACTTCTCTTACATCCA	-68232321	True	NA	NA	False	AATAAA	-17	NA	68232545	68098472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68098754_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194222_68232193
transcript_67450.known	chr19	+	3042	21	FSM	ENSG00000160633.13	ENST00000292123.9	3042	21	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_18	229.232545682327	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAAGTGTCATTTCTTTA	5594540	True	NA	57	True	AATAAA	-26	NA	5623098	5668478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667352_5667451_5667819_5667887_5668161
transcript_67451.known	chr19	+	3014	21	FSM	ENSG00000160633.13	ENST00000592224.5	3014	21	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_18	140.503167224088	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATACCCTTTATTTAAAGT	5594559	True	NA	45	True	AATAAA	-14	NA	5623117	5668466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5648988_5649500_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_67452.nic	chr19	+	2565	20	NIC	ENSG00000160633.13	novel	3064	21	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	289.578641259476	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	5594505	True	NA	50	True	AATAAA	-19	NA	5623063	5668471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661517_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_67453.nic	chr19	+	2696	20	NIC	ENSG00000160633.13	novel	3014	21	NA	NA	-105	0	combination_of_known_junctions	FALSE	canonical	3	79	junction_6	267.523504546357	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTTATTTAAAGTGTCAT	5622917	False	NA	50	True	AATAAA	-19	NA	5622929	5668471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_5623395_5626404_5626490_5641593_5641659_5641739_5641947_5645336_5645400_5648015_5648044_5649925_5649976_5650977_5651073_5653114_5653265_5653337_5653421_5654060_5654201_5654367_5654457_5657240_5657348_5661520_5661809_5664021_5664160_5664396_5664440_5667045_5667165_5667346_5667451_5667819_5667887_5668161
transcript_6746.known	chr1	-	2716	12	FSM	ENSG00000116729.14	ENST00000262348.9	2716	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	3.23207069720567	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACACATGCGTGCAGATTAT	-68232299	True	NA	NA	False	NA	NA	NA	68232523	68125359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68126336_68137779_68137934_68144568_68144653_68145868_68146013_68148135_68148200_68148562_68148661_68150187_68150357_68153516_68153654_68155098_68155261_68159122_68159248_68193954_68194228_68232193
transcript_67468.nnic	chr19	+	565	3	NNC	ENSG00000160633.13	novel	632	4	NA	NA	-8	-17818	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	576	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGTCATTCAATTTAATCT	5594516	True	NA	16	True	TATAAA	-31	NA	5623074	5630369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_5623395_5626404_5626490_5630209
transcript_67470.nic	chr19	+	1228	2	ISM	ENSG00000160633.13	ENST00000591666.5	632	4	0	20867	0	-20867	5prime_fragment	FALSE	canonical	3	1153	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACCTAGGCGTCGAGGCAC	5594524	True	NA	NA	False	NA	NA	NA	5623082	5627320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_5623395_5626404
transcript_67471.known	chr19	-	3167	21	FSM	ENSG00000130254.12	ENST00000252542.9	3167	21	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_14	43.774735864423	123	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGCGTGCGCGTGCACA	-5615503	True	NA	-17	True	AATAAA	-15	NA	5622776	5586998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5587400_5587700_5587768_5587867_5587981_5590277_5590409_5591747_5591794_5592746_5592888_5593890_5594179_5595360_5595498_5598792_5598885_5600129_5600261_5604582_5604696_5604786_5604937_5609994_5610096_5610638_5610689_5611119_5611631_5612539_5612568_5613464_5613528_5616131_5616336_5616421_5616487_5621308_5621397_5622529
transcript_6748.known	chr1	-	700	2	FSM	ENSG00000116729.14	ENST00000370971.1	700	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAATAGCAAACAATTATTG	-68232299	True	NA	NA	False	AATAAA	-17	NA	68232523	68193857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68194228_68232193
transcript_6749.known	chr1	-	582	1	FSM	ENSG00000229133.1	ENST00000444127.1	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	140	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAACAAAAATGACTAAATA	NA	False	NA	NA	False	NA	NA	NA	68243055	68242473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68242500_68243100
transcript_6750.known	chr1	-	5299	12	FSM	ENSG00000024526.17	ENST00000456315.7	5299	12	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_1	23.8226921475518	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-68491496	True	NA	-9	True	ATTAAA	-17	NA	68497082	68474151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_67515.known	chr19	+	730	4	FSM	ENSG00000167733.14	ENST00000422535.6	730	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	17.326921891156	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGCGTGGTGTCAGG	NA	False	NA	NA	False	AATAAA	-23	NA	5681047	5685589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5681272_5684818_5684906_5684988_5685120_5685301
transcript_67521.known	chr19	+	556	3	FSM	ENSG00000130255.13	ENST00000394580.2	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	14569	junction_2	662	15833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCTCTCCTGCTGTC	5498653	True	NA	42	True	AATAAA	-17	NA	5690315	5691667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5690601_5691318_5691454_5691531
transcript_67527.known	chr19	+	399	3	FSM	ENSG00000167733.14	ENST00000577701.1	399	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	29.5	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTGGGAGGCCGAGGAAA	5681043	True	NA	NA	False	AATAAA	-44	NA	5681054	5685328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5681272_5684964_5685120_5685301
transcript_67532.known	chr19	-	516	4	FSM	ENSG00000174917.9	ENST00000309324.9	516	4	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_3	37.4195433192633	7127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5674234	True	NA	-7	True	AATAAA	-15	NA	5680516	5678421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680457
transcript_67533.known	chr19	-	655	4	FSM	ENSG00000174917.9	ENST00000587950.5	655	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	283.695063208525	893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGACCCGTGTGCTGG	-5680202	False	6282	-7	True	AATAAA	-15	NA	5680252	5678421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5678649_5679344_5679397_5679585_5679764_5680054
transcript_67534.known	chr19	-	586	4	FSM	ENSG00000174917.9	ENST00000585605.1	586	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	302.41288920209	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGACCCGTGTGCTGGC	-5679713	False	NA	-6	True	AATAAA	-16	NA	5679763	5678420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5678649_5678774_5678903_5679344_5679397_5679585
transcript_67535.known	chr19	-	577	4	FSM	ENSG00000174917.9	ENST00000587589.1	577	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	279.43077059543	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAAAAATTAGCCTGGTAT	-5674206	True	NA	NA	False	AATAAA	-2	NA	5680488	5678914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5679231_5679344_5679397_5679585_5679764_5680457
transcript_67536.known	chr19	+	874	6	FSM	ENSG00000130255.13	ENST00000577222.5	874	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6838.83881956579	72328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTCTCCCTGAAATAAAGA	5680162	True	NA	8	True	AAGAAA	-19	NA	5681181	5691633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5681272_5684964_5685120_5690030_5690328_5690505_5690601_5691318_5691454_5691531
transcript_67537.known	chr19	+	607	4	FSM	ENSG00000130255.13	ENST00000347512.8	607	4	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3077.55534294493	55151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGATTAAGCCGACTGAG	5498632	True	NA	44	True	ATTAAA	-17	NA	5690294	5691875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5690328_5690505_5690601_5691318_5691454_5691531
transcript_67538.known	chr19	+	452	3	FSM	ENSG00000130255.13	ENST00000579446.1	452	3	0	0	0	0	multi-exon	FALSE	canonical	3	8804	junction_1	3544.5	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCTTGACAGAAGCCCTG	5498643	True	NA	28	True	AATAAA	-3	NA	5690305	5691653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5690328_5690505_5690601_5691318
transcript_67539.nnic	chr19	-	2117	13	NIC	ENSG00000141994.16	novel	2038	13	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_11	51.5102470927441	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787577	True	NA	-5	True	AATAAA	-17	NA	5791238	5785139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790042_5790336_5791043
transcript_67542.known	chr19	-	2038	13	FSM	ENSG00000141994.16	ENST00000309061.12	2038	13	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	22.6562476053639	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGCCTTTCTGTGACCC	-5787502	True	NA	-5	True	AATAAA	-17	NA	5791163	5785139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5785276_5785382_5785512_5785602_5785792_5786466_5786543_5786748_5786846_5787060_5787172_5787295_5787362_5787588_5787706_5788023_5788177_5788356_5788399_5789206_5789720_5790046_5790336_5791043
transcript_6756.known	chr1	-	4586	11	FSM	ENSG00000024526.17	ENST00000370966.9	4586	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	68.5248130241885	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTTTTCTTGTGTCTCA	-68497204	True	NA	-9	True	ATTAAA	-17	NA	68497221	68474151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_68477070_68477786_68477973_68479143_68479321_68481439_68481613_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_67560.known	chr19	-	604	2	FSM	ENSG00000174886.14	ENST00000591160.1	604	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGCTGGGCATGATGGTGC	NA	False	NA	NA	False	AGTAAA	-5	NA	5904006	5902430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5902640_5903611
transcript_67561.known	chr19	-	575	4	FSM	ENSG00000174886.14	ENST00000308961.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	2497	junction_1	209.19103443716	18468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871363	True	NA	-10	True	AATAAA	-18	NA	5903790	5894674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5903611
transcript_67562.known	chr19	-	2406	4	FSM	ENSG00000174886.14	ENST00000418389.6	2406	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1350.87782159931	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAATAAATAAATAAATAA	-5871359	True	NA	NA	False	NA	NA	NA	5903786	5891275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5893291_5896452_5896576_5896904_5896998_5903611
transcript_67563.known	chr19	-	657	5	FSM	ENSG00000174886.14	ENST00000593233.1	657	5	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_4	1251.08979993444	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCAGTGTCCGGAGGGC	-5871327	True	NA	-12	True	AATAAA	-16	NA	5903754	5894676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5894855_5896452_5896576_5896904_5896998_5901334_5901455_5903611
transcript_67564.known	chr19	-	2154	3	FSM	ENSG00000174886.14	ENST00000592634.5	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	2709	junction_1	149	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCAGTGTCCGGAGGGCTT	-5871344	True	NA	-10	True	AATAAA	-18	NA	5903771	5894674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5896576_5896904_5896998_5903611
transcript_67565.known	chr19	-	403	2	FSM	ENSG00000174886.14	ENST00000591341.1	403	2	0	0	0	0	multi-exon	FALSE	canonical	3	2497	junction_1	0	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTGTCAGTGTCCGGA	-5896646	False	NA	-16	True	AATAAA	-12	NA	5896681	5894680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5894855_5896452
transcript_67571.nic	chr19	-	1820	13	NIC	ENSG00000031823.14	novel	1762	16	NA	NA	-152	0	combination_of_known_junctions	TRUE	canonical	3	38	junction_12	144.955069667198	472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGACTGGAGACCTCGT	-5977587	True	NA	-7	True	NA	NA	NA	5978294	5917321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5978060
transcript_67574.known	chr19	-	1762	16	FSM	ENSG00000031823.14	ENST00000034275.12	1762	16	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_9	75.7928756546418	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCACATTAAGACTTGTC	-5970632	True	NA	-37	True	NA	NA	NA	5978086	5917351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931403_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_67575.known	chr19	-	1783	16	FSM	ENSG00000031823.14	ENST00000591092.5	1783	16	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_9	85.3759268698671	570	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGGGACTGGAGACCTCG	-5970639	True	NA	-8	True	NA	NA	NA	5978093	5917322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_5917654_5917793_5917981_5918495_5918639_5921200_5921322_5923193_5923304_5923811_5923915_5924826_5924906_5925633_5925738_5927967_5928088_5931418_5931532_5932451_5932545_5933413_5933480_5941620_5941708_5941798_5941836_5957917_5957974_5978060
transcript_67576.known	chr19	-	787	6	FSM	ENSG00000087903.13	ENST00000586940.1	787	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	9.13454979733539	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGCCTCCTTAAGAAAG	-6110204	True	NA	NA	False	AATACA	-33	NA	6110478	6027163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6027335_6039979_6040242_6042043_6042124_6044192_6044283_6047406_6047505_6110392
transcript_67579.known	chr19	-	310	2	FSM	ENSG00000087903.13	ENST00000590822.1	310	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACACACTATGTGGCCTTTTG	-6110194	True	NA	NA	False	TATAAA	-8	NA	6110468	6078100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6078335_6110392
transcript_67580.known	chr19	-	557	2	FSM	ENSG00000087903.13	ENST00000589641.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGACAGAGAGAGAAGACAG	-6199332	True	NA	NA	False	TATAAA	-44	NA	6199572	6191569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6192030_6199475
transcript_67581.nnic	chr19	+	607	2	FSM	ENSG00000266983.2	ENST00000692109.1	388	2	-221	2	-221	-2	multi-exon	FALSE	canonical	3	19	junction_1	0	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTAGCGTCTGCTGATT	NA	False	NA	11	True	AATAAA	-16	NA	5978133	5980727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5978515_5980501
transcript_67582.nic	chr19	+	376	2	FSM	ENSG00000266983.2	ENST00000685063.1	787	2	0	411	0	-411	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTATATGACACTGGGGAACG	5978086	True	NA	NA	False	ATTAAA	-16	NA	5978363	6012344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_5978515_6012119
transcript_67583.known	chr19	+	418	2	FSM	ENSG00000267589.1	ENST00000586415.1	418	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGACGGCTCATGTGCATG	NA	False	NA	NA	False	AAGAAA	-5	NA	6072822	6073527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6072982_6073268
transcript_67585.known	chr19	+	480	6	FSM	ENSG00000125656.11	ENST00000597326.6	480	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	246.348208842687	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGAGAGGGACCGCTACAT	6353444	False	NA	NA	False	NA	NA	NA	6361746	6368545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6361773_6361868_6361941_6362445_6362526_6364451_6364640_6366257_6366364_6368537
transcript_67589.known	chr19	+	1346	5	FSM	ENSG00000125656.11	ENST00000596070.1	1346	5	0	0	0	0	multi-exon	FALSE	canonical	3	563	junction_1	36.2172265641642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGAGCTGGGCCTCCTCTC	6353262	True	NA	NA	False	NA	NA	NA	6361564	6368707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6361773_6361868_6362543_6364451_6364640_6366257_6366364_6368537
transcript_67590.known	chr19	+	745	5	FSM	ENSG00000125656.11	ENST00000596149.5	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	605	junction_1	18.8729303501073	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGACCCCCAGCTGGGC	6361697	False	NA	NA	False	NA	NA	NA	6361803	6368754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6361941_6362445_6362543_6364451_6364640_6366257_6366364_6368537
transcript_67591.known	chr19	+	621	4	FSM	ENSG00000125656.11	ENST00000596605.2	621	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	287.337586975475	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTCTGGGACACCC	6361449	False	NA	23	True	ATTAAA	-15	NA	6361887	6368902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6361941_6362445_6362543_6366257_6366364_6368537
transcript_67592.known	chr19	+	970	4	FSM	ENSG00000125652.8	ENST00000245812.8	970	4	0	0	0	0	multi-exon	FALSE	canonical	3	450	junction_1	89.3582054927744	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCCCAGCACTGCAGCT	6366292	True	NA	3	True	AATAAA	-13	NA	6372793	6375250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6373025_6374202_6374377_6374464_6374590_6374810
transcript_67597.known	chr19	+	603	4	FSM	ENSG00000125652.8	ENST00000596657.1	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	298.617927570778	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTGGGACATTGCAGTG	6373459	False	NA	11	True	AATAAA	-18	NA	6373470	6375027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6373558_6374202_6374377_6374464_6374590_6374810
transcript_67600.known	chr19	+	556	4	FSM	ENSG00000125652.8	ENST00000599849.1	556	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	294.378441239617	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	6373687	False	NA	15	True	AATAAA	-22	NA	6373703	6375031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6373740_6374202_6374377_6374464_6374590_6374810
transcript_67601.nnic	chr19	+	922	4	NNC	ENSG00000125652.8	novel	556	4	NA	NA	-88	0	at_least_one_novel_splicesite	FALSE	canonical	3	49	junction_1	277.892465213115	619	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGGACATTGCAGTGGCTG	6373581	False	NA	15	True	AATAAA	-22	NA	6373615	6375031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_6374018_6374202_6374377_6374464_6374590_6374810
transcript_67611.known	chr19	-	2432	13	FSM	ENSG00000125651.14	ENST00000394456.10	2432	13	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_10	33.6373634850031	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCAGATTTCTTTGTTT	-6387515	True	NA	-36	True	AATAAA	-18	NA	6393164	6379571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6380486_6380572_6380691_6380903_6381043_6381121_6381196_6381358_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_67616.nnic	chr19	-	1896	10	NNC	ENSG00000125651.14	novel	1382	10	NA	NA	-278	9	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	100.323919824182	64	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTTGTTTCCTTTTTAG	NA	False	NA	-27	True	AATAAA	-27	NA	6393483	6379562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_6380024_6381429_6381479_6381553_6381616_6381696_6381851_6383310_6383496_6387388_6387560_6389443_6389638_6391901_6391975_6392856_6392904_6392983
transcript_67619.nic	chr19	-	548	2	ISM	ENSG00000125651.14	ENST00000598607.1	568	6	498	5351	-278	-5351	internal_fragment	FALSE	canonical	3	321	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTCCCCAGCCCCATCTC	NA	False	NA	NA	False	NA	NA	NA	6393483	6392855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6392904_6392983
transcript_67620.known	chr19	-	2993	20	FSM	ENSG00000088247.19	ENST00000398148.7	2993	20	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_1	118.181090209485	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCGTCTGCGGGTGCTGTCT	-6412329	True	NA	30	True	AATAAA	-16	NA	6424794	6413347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6414121_6415140_6415302_6415379_6415458_6415533_6415735_6415807_6415897_6416297_6416408_6416489_6416651_6416737_6416883_6416986_6417088_6417738_6417842_6417980_6418080_6418482_6418582_6418701_6418877_6419202_6419261_6420072_6420145_6420421_6420472_6421277_6421318_6421649_6421689_6422339_6422437_6424452
transcript_67621.known	chr19	-	1535	7	FSM	ENSG00000181240.14	ENST00000321510.7	1535	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTGGATACTTGGGCC	-6433752	False	NA	0	True	AATAAA	-19	NA	6433763	6426036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6426562_6427102_6427251_6427333_6427502_6429723_6429832_6430008_6430162_6432048_6432205_6433486
transcript_6763.nic	chr1	-	2442	11	ISM	ENSG00000024526.17	ENST00000456315.7	5299	12	-70	3644	69	-899	5prime_fragment	FALSE	canonical	3	205	junction_4	22.2036033111745	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAACAGGTAAGAGAATG	-68497135	False	NA	NA	False	ATTAAA	-37	NA	68497152	68477795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_68477973_68479143_68479321_68481439_68481613_68482045_68482898_68483949_68484091_68486936_68486985_68488373_68488505_68488915_68489035_68489451_68489609_68494429_68494696_68496951
transcript_67635.known	chr19	+	733	5	FSM	ENSG00000130545.16	ENST00000356762.7	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_4	67.0312427156173	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460343	True	NA	12	True	TATAAA	-24	NA	6464282	6467221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465_6466610_6466950
transcript_67636.known	chr19	+	1086	4	FSM	ENSG00000130545.16	ENST00000600229.6	1086	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_3	19.7709101684492	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTATTGGTGTGTTTGAG	6460331	True	NA	12	True	TATAAA	-24	NA	6464270	6467221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6464351_6464607_6464784_6465544_6465619_6466465
transcript_67637.known	chr19	-	2277	4	FSM	ENSG00000104833.12	ENST00000264071.7	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	2.49443825784929	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTGCCGAATCCCTCT	-6500557	True	NA	-12	True	AATAAA	-22	NA	6502309	6494318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6496222_6501286_6501398_6501514_6501624_6502155
transcript_67639.known	chr19	-	911	3	FSM	ENSG00000125726.11	ENST00000245903.4	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGCTTCGTGGCGTGCA	-6591060	True	NA	NA	False	ATTAAA	-15	NA	6591150	6585838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6586406_6590102_6590137_6590840
transcript_67641.nic	chr19	-	2028	18	NIC	ENSG00000125734.16	novel	2009	18	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	68.4114359407405	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6737200	False	NA	-4	True	NA	NA	NA	6737305	6730054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_67642.nic	chr19	-	1862	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_2	65.2970852531761	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	NA	False	NA	-4	True	NA	NA	NA	6737606	6730054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_6730385_6730986_6731055_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_67645.known	chr19	-	2009	18	FSM	ENSG00000125734.16	ENST00000430424.8	2009	18	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_17	42.4832961271485	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTGTACAATAATGACCAAT	-6737155	False	1825	-35	True	NA	NA	NA	6737260	6730085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6736989
transcript_67646.nic	chr19	-	1809	18	NIC	ENSG00000125734.16	novel	2034	18	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_17	69.7307724239261	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGTTGTCTTGCCTTTTT	-6737202	False	NA	-4	True	NA	NA	NA	6737307	6730054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732475_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737267
transcript_67647.known	chr19	-	1834	18	FSM	ENSG00000125734.16	ENST00000597706.5	1834	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	74.8017911448483	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCCAGCTATGTGTACA	-6735735	True	NA	-47	True	NA	NA	NA	6737560	6730097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6730385_6730986_6731112_6731198_6731283_6731472_6731523_6731890_6731935_6732024_6732156_6732262_6732381_6732471_6732550_6732986_6733063_6733167_6733302_6733569_6733675_6733844_6733914_6734004_6734055_6734182_6734308_6735621_6735705_6735907_6735959_6736591_6736712_6737456
transcript_67666.nic	chr19	-	549	2	ISM	ENSG00000125734.16	ENST00000595108.5	831	6	16	2544	12	-571	5prime_fragment	FALSE	canonical	3	124	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTTTCGTCATCTGTAC	-6737200	False	NA	NA	False	NA	NA	NA	6737305	6736478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6736712_6736989
transcript_67667.known	chr19	-	368	2	FSM	ENSG00000125730.17	ENST00000601475.1	368	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTCTGGAGTTCTTTGCC	NA	False	NA	-1	True	GATAAA	-18	NA	6678330	6677834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6678024_6678151
transcript_67668.known	chr19	-	595	4	FSM	ENSG00000125734.16	ENST00000595620.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	57.1333722286915	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGAGTGCTTCCGGTGTC	-6735724	True	NA	NA	False	AATGAA	-18	NA	6737549	6735373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_6735705_6735907_6735959_6736591_6736712_6737456
transcript_67671.known	chr19	+	1920	14	FSM	ENSG00000125733.18	ENST00000596758.5	1920	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_13	164.09864979306	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTTTTATACAAAAATGGG	6731357	True	NA	11	True	NA	NA	NA	6739761	6751464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751033
transcript_67672.known	chr19	+	2035	14	FSM	ENSG00000125733.18	ENST00000313285.12	2035	14	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	43.3077606229821	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	6731275	True	NA	33	True	TATAAA	-18	NA	6739679	6751526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750432_6750511_6750634_6751062
transcript_67673.known	chr19	+	2068	13	FSM	ENSG00000125733.18	ENST00000595305.5	2068	13	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	42.3073246876025	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTAGAGGATTTAAATA	6731322	True	NA	33	True	TATAAA	-18	NA	6739726	6751526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_6739786_6741009_6741126_6741224_6741282_6742966_6743115_6743193_6743257_6743493_6743599_6743707_6743837_6744553_6744701_6744799_6744995_6746451_6746562_6749933_6750067_6750291_6750634_6751062
transcript_67676.nic	chr19	-	1195	4	ISM	ENSG00000125731.13	ENST00000597687.1	859	6	-78	4502	-78	-1788	5prime_fragment	FALSE	canonical	3	132	junction_2	8.28653526310404	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTACAATTATTCCAAG	-6765444	True	NA	NA	False	NA	NA	NA	6767541	6759117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6759671_6760637_6760988_6763679_6763817_6767386
transcript_67678.nic	chr19	-	930	2	ISM	ENSG00000125731.13	ENST00000245908.11	2281	10	13644	0	1450	0	3prime_fragment	FALSE	canonical	3	163	junction_1	0	160	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGAGGCTGTGTACTTTCT	NA	False	NA	-1	True	AATAAA	-22	NA	6753791	6752159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6752754_6753455
transcript_67679.nic	chr19	-	1460	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-116	7606	-78	-5182	5prime_fragment	FALSE	canonical	3	152	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGGCCGGAAGAA	-6765444	True	NA	NA	False	NA	NA	NA	6767541	6762511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6763817_6767386
transcript_67680.nic	chr19	-	1292	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-116	7774	-78	-5350	5prime_fragment	FALSE	canonical	3	152	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATTATCCAGGCATGGG	-6765444	True	NA	NA	False	AAAAAG	-2	NA	6767541	6762679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6763817_6767386
transcript_67681.nic	chr19	-	744	2	ISM	ENSG00000125731.13	ENST00000597254.1	586	3	-116	8322	-78	-5898	5prime_fragment	FALSE	canonical	3	152	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGACATGGTGGTATGCG	-6765444	True	NA	NA	False	AATAAA	-14	NA	6767541	6763227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_6763817_6767386
transcript_67683.known	chr19	+	5759	8	FSM	ENSG00000130544.12	ENST00000252840.11	5759	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	1.39970842444753	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	7068590	True	NA	NA	False	ATTAAA	-30	NA	7069702	7087968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_67685.nnic	chr19	+	970	8	NNC	ENSG00000130544.12	novel	5759	8	NA	NA	-2	8236	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_7	3.01018678652935	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAACTGGTCCCTTAAA	7068588	True	NA	NA	False	AATAAA	-16	NA	7069700	7096204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7095904
transcript_67686.known	chr19	+	5736	8	FSM	ENSG00000130544.12	ENST00000414706.2	5736	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.0995626366713	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTCTGTAATTCTGTCA	7068592	True	NA	NA	False	ATTAAA	-30	NA	7069704	7087968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075675_7075744_7076380_7076508_7081359_7081456_7081969_7082053_7082877
transcript_67690.nic	chr19	+	1067	7	ISM	ENSG00000130544.12	ENST00000252840.11	5759	8	-15	5532	-15	-5532	5prime_fragment	FALSE	canonical	2	6	junction_3	1.34370962471642	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGGCTTTATTAAATA	7068575	True	NA	NA	False	NA	NA	NA	7069687	7082436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075654_7075744_7076380_7076508_7081359_7081456_7081969
transcript_67692.nic	chr19	+	1063	7	ISM	ENSG00000130544.12	ENST00000414706.2	5736	8	-34	5532	-32	-5532	5prime_fragment	FALSE	canonical	2	3	junction_3	2.21108319357027	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGTGGCTTTATTAAATA	7069572	False	NA	NA	False	NA	NA	NA	7069670	7082436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7069774_7070561_7070654_7074995_7075106_7075675_7075744_7076380_7076508_7081359_7081456_7081969
transcript_67706.known	chr19	+	589	2	FSM	ENSG00000198723.11	ENST00000601292.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCACTCTTTCCCATCAGT	7506772	False	NA	2	True	AATAAA	-17	NA	7506794	7508447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7507142_7508205
transcript_67707.known	chr19	-	1078	5	FSM	ENSG00000104883.8	ENST00000221480.6	1078	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	12.8646803302686	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCAGGGGTGAAGG	-7488721	True	NA	-5	True	ATTAAA	-16	NA	7489035	7476874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7477437_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_67708.known	chr19	-	806	5	FSM	ENSG00000104883.8	ENST00000593547.1	806	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	23.3291662945764	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCAATTAAACATTGTGGT	-7488658	False	NA	-31	True	NA	NA	NA	7488972	7476900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7477254_7478313_7478377_7482032_7482212_7485837_7486027_7488950
transcript_67712.known	chr19	+	2084	14	FSM	ENSG00000090674.16	ENST00000264079.11	2084	14	0	0	0	0	multi-exon	TRUE	canonical	3	100	junction_11	20.3501886358528	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGGGAGGAGCAGTCCTTGC	7521226	True	NA	24	True	AATAAA	-32	NA	7522623	7534009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7522782_7524960_7525167_7526438_7526607_7526760_7526927_7527519_7527629_7527863_7527961_7528157_7528258_7528596_7528704_7528820_7528971_7529100_7529203_7529589_7529713_7530285_7530502_7533522_7533654_7533758
transcript_67715.nic	chr19	+	1602	10	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19413	0	-131	0	3prime_fragment	FALSE	canonical	1	134	junction_5	71.6999922516655	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7555074	True	NA	22	True	AATAAA	-16	NA	7555129	7561764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_67717.nic	chr19	+	1463	9	ISM	ENSG00000032444.17	ENST00000600737.6	4372	32	19791	0	247	0	3prime_fragment	FALSE	canonical	1	134	junction_4	75.1555678243468	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7555436	True	NA	22	True	AATAAA	-16	NA	7555507	7561764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_67722.known	chr19	+	492	2	FSM	ENSG00000090674.16	ENST00000602227.1	492	2	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCGTTTTCATTTTTAG	NA	False	NA	5	True	AATAAA	-13	NA	7533393	7533990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7533654_7533758
transcript_67723.known	chr19	+	4372	32	FSM	ENSG00000032444.17	ENST00000600737.6	4372	32	0	0	0	0	multi-exon	TRUE	canonical	1	134	junction_27	59.8449262052165	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTCCTGTCGTTTTCGG	7534947	True	NA	22	True	AATAAA	-16	NA	7535716	7561764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7536021_7536190_7536274_7536448_7536547_7539917_7540059_7540148_7540309_7540629_7540711_7540922_7541052_7541353_7541435_7541521_7541685_7541983_7542068_7542560_7542671_7542760_7542929_7543006_7543085_7549906_7550113_7550297_7550430_7550516_7550641_7550993_7551108_7551361_7551438_7553874_7554016_7554208_7554273_7554554_7554724_7554892_7555076_7555248_7555368_7555606_7555764_7556452_7556570_7556654_7556725_7557167_7557285_7558849_7559152_7560647_7560765_7561013_7561111_7561207_7561318_7561487
transcript_67725.known	chr19	-	2647	19	FSM	ENSG00000076924.12	ENST00000358368.5	2647	19	0	0	0	0	multi-exon	FALSE	canonical	3	319	junction_6	28.854038808381	131	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGAGCCTCCTTCCTG	-7623743	True	NA	-2	True	AATACA	-18	NA	7629545	7619524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7619648_7619746_7619857_7619945_7620076_7620274_7620447_7620546_7620670_7620845_7621037_7621134_7621298_7622330_7622445_7622529_7622662_7622761_7622894_7623169_7623290_7623730_7623883_7624300_7624446_7625879_7626045_7626135_7626271_7627242_7627441_7627727_7627852_7628149_7628299_7629476
transcript_67731.known	chr19	+	1859	19	FSM	ENSG00000076944.17	ENST00000414284.6	1859	19	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	91.8466415039524	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCCTACCTCACCTT	7631081	True	NA	21	True	AATAAA	-21	NA	7637126	7647873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640739_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_6774.known	chr1	+	1247	3	FSM	ENSG00000234264.1	ENST00000428732.1	1247	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATTTCGTCAGTTTTGTA	68496651	True	NA	NA	False	ATTAAA	-20	NA	68496675	68538627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_68496772_68529324_68529480_68537631
transcript_67755.known	chr19	+	219	3	FSM	ENSG00000229833.10	ENST00000456958.7	219	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	1671	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTAAGTGTTTTATTC	7619695	True	NA	9	True	AATATA	-22	NA	7629813	7631620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7629861_7630822_7630847_7631472
transcript_67759.known	chr19	+	1815	1	FSM	ENSG00000229833.10	ENST00000623154.1	1815	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTAAGTGTTTTATTCTTT	7619690	True	NA	12	True	AATATA	-25	NA	7629808	7631623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7629800_7631600
transcript_67760.known	chr19	+	375	5	FSM	ENSG00000229833.10	ENST00000598540.6	375	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	1543.73692302154	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7619720	True	NA	13	True	AATATA	-26	NA	7629838	7631624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7629861_7630572_7630660_7630822_7630847_7631231_7631322_7631472
transcript_67761.known	chr19	+	474	2	FSM	ENSG00000229833.10	ENST00000600836.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	3389	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAAGTGTTTTATTCTTTT	7620406	False	NA	13	True	AATATA	-26	NA	7630524	7631624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7630847_7631472
transcript_67762.known	chr19	+	1914	19	FSM	ENSG00000076944.17	ENST00000441779.6	1914	19	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_4	94.2613912296186	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCAGTGCCTACCTCACCT	7631067	True	NA	20	True	AATAAA	-20	NA	7637112	7647872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7637187_7638725_7638776_7639018_7639101_7639730_7639808_7640697_7640810_7640899_7641004_7641704_7641854_7642033_7642119_7642202_7642334_7642428_7642537_7642765_7642824_7642982_7643049_7643164_7643246_7644613_7644753_7645196_7645307_7646248_7646345_7647161_7647248_7647353_7647512_7647724
transcript_67763.known	chr19	+	516	4	FSM	ENSG00000104918.8	ENST00000221515.6	516	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATGATGGAGCGGATCTGA	NA	False	NA	NA	False	AATAAA	-30	NA	7669048	7670455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7669122_7669316_7669445_7669820_7669899_7670218
transcript_67767.known	chr19	+	1730	7	FSM	ENSG00000183019.8	ENST00000333598.8	1271	7	-462	3	-460	-3	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCGTCGCTATGGGACCTG	NA	False	NA	NA	False	AATAAA	-13	NA	7676627	7679826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7677176_7677636_7677727_7678103_7678242_7678349_7678401_7678490_7678605_7678923_7678984_7679097
transcript_67768.known	chr19	+	411	2	FSM	ENSG00000181029.9	ENST00000595985.1	411	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACGTGTGTCTTGTGTCT	7682202	True	NA	26	True	GATAAA	-19	NA	7682242	7682854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7682323_7682523
transcript_67769.nic	chr19	-	1050	5	ISM	ENSG00000182566.15	ENST00000328853.11	1299	9	1208	1	1208	0	3prime_fragment	FALSE	canonical	1	2	junction_2	1.6393596310755	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCTGGCTCTGGCGAGATC	NA	False	NA	NA	False	AATAAA	-22	NA	7730902	7728957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_7729505_7729820_7729937_7730018_7730168_7730350_7730441_7730754
transcript_6777.known	chr1	+	541	2	FSM	ENSG00000285407.1	ENST00000645269.1	541	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAATAAACATTTTTATAA	68881905	False	NA	NA	False	NA	NA	NA	68881979	68883459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_68882004_68882942
transcript_67772.nic	chr19	+	1626	4	ISM	ENSG00000268297.1	ENST00000596555.1	870	9	1224	-392	1224	392	intron_retention	FALSE	canonical	2	7	junction_1	1.63299316185545	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGGCTCCTGGCTCTGGT	7788750	True	NA	3	True	AATAAA	-16	NA	7788772	7791013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7788901_7789208_7789305_7789495_7789644_7789759
transcript_67773.nic	chr19	+	1777	3	ISM	ENSG00000142459.9	ENST00000270530.8	3855	19	32707	0	2355	0	3prime_fragment	FALSE	canonical	3	50	junction_2	20.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGACTGGCCTGCGGGCTGG	7862661	True	NA	22	True	AATAAA	-18	NA	7862939	7864976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7863068_7863184_7863281_7863423
transcript_67775.known	chr19	+	3590	3	FSM	ENSG00000171017.11	ENST00000306708.11	3590	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	1	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTAGTTTTGATCTCTTA	7888294	True	NA	7	True	AATAAA	-18	NA	7888509	7902016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7888601_7895598_7895742_7898660
transcript_67777.known	chr19	+	1519	3	FSM	ENSG00000076984.18	ENST00000475022.1	1519	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTAGGTGGAGGTTGCAGT	7898677	True	NA	NA	False	CATAAA	-2	NA	7903906	7907066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7904069_7904450_7904549_7905807
transcript_67778.known	chr19	+	3375	11	FSM	ENSG00000076984.18	ENST00000397979.4	3375	11	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_7	9.48894093142117	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGAGTCTGTGGTGTGTCAT	7898647	True	NA	17	True	AATAAA	-19	NA	7903876	7914478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7904069_7909754_7909897_7910062_7910130_7910259_7910374_7910452_7910573_7910695_7910804_7910979_7911160_7911249_7911331_7911435_7911579_7912148_7912195_7912296
transcript_6778.known	chr1	+	1299	2	FSM	ENSG00000285407.1	ENST00000646995.1	1299	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTCTCTCTCTTTTTTT	68881502	False	NA	NA	False	NA	NA	NA	68881576	68943452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_68882004_68942580
transcript_67780.nic	chr19	+	282	2	ISM	ENSG00000260001.7	ENST00000566166.1	479	3	401	-7	401	0	3prime_fragment	FALSE	canonical	3	52	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGGTGCAGTCAGTGAG	7918000	True	NA	10	True	AATAAA	-21	NA	7918028	7919097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_7918130_7918916
transcript_67781.known	chr19	+	1520	5	FSM	ENSG00000104976.12	ENST00000221573.11	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	19.5751756058534	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	7917911	True	NA	24	True	AATAAA	-24	NA	7920337	7923250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7920550_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_67782.known	chr19	+	1413	5	FSM	ENSG00000104976.12	ENST00000597584.5	1413	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	85.5756244499565	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGTGACTTAAAGATGGAA	7920970	True	NA	24	True	AATAAA	-24	NA	7921014	7923250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7921120_7921422_7921543_7921704_7921774_7922034_7922348_7922444
transcript_67787.known	chr19	-	1797	13	FSM	ENSG00000104980.8	ENST00000595831.5	1797	13	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_9	130.797128748642	446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCGAATTGCAGAAGAGCAGC	-7938226	True	NA	-27	True	AATAAA	-4	NA	7943635	7926735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7927307_7927656_7927768_7928076_7928167_7931137_7931189_7932626_7932752_7932839_7932933_7933484_7933571_7933863_7934004_7934088_7934242_7935064_7935146_7938026_7938198_7941101_7941198_7943606
transcript_67795.known	chr19	-	556	3	FSM	ENSG00000104980.8	ENST00000600000.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	473	junction_2	8.5	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCCGCCTCAGCCTT	-7938257	True	NA	NA	False	NA	NA	NA	7943666	7937797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7938198_7941101_7941198_7943606
transcript_67796.known	chr19	+	1073	2	FSM	ENSG00000286138.2	ENST00000652364.1	1073	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTATTATCCCAGCAACTC	7943965	False	NA	NA	False	GATAAA	-43	NA	7944240	7945400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_7944412_7944498
transcript_67797.known	chr19	-	6054	6	FSM	ENSG00000066044.15	ENST00000407627.7	6054	6	0	0	0	0	multi-exon	FALSE	canonical	3	1685	junction_1	124.802884582048	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTGGTGTAGGGGTGAT	-7997458	True	NA	1	True	AATAAA	-20	NA	8005641	7958572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_7963808_7967564_7967791_7973724_7973879_7981082_7981187_7991643_7991832_8005494
transcript_67805.known	chr19	+	991	6	FSM	ENSG00000131142.14	ENST00000315626.6	991	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.46969384566991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTGTTACATTTCT	8052749	True	NA	NA	False	AATAAA	-22	NA	8052759	8062650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057800_8057921_8062217
transcript_67806.known	chr19	+	958	6	FSM	ENSG00000131142.14	ENST00000253451.9	958	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1.62480768092719	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATAAACCTTGGGGGGTGA	8052751	True	NA	NA	False	NA	NA	NA	8052761	8062622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057803_8057921_8062217
transcript_67807.known	chr19	+	1036	7	FSM	ENSG00000131142.14	ENST00000680646.1	1036	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTGTTACATTTCT	NA	False	NA	NA	False	AATAAA	-22	NA	8052317	8062650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8052367_8052763_8052823_8052999_8053123_8056151_8056270_8056365_8056500_8057800_8057921_8062217
transcript_67810.known	chr19	+	1637	11	FSM	ENSG00000090661.12	ENST00000559450.5	1637	11	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	111.734327760094	170	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGCCTGAGAACTTGG	8204432	True	NA	11	True	ATTAAA	-16	NA	8209355	8262421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8209495_8251075_8251250_8254498_8254617_8255606_8255726_8255821_8255880_8256235_8256287_8256617_8256711_8256948_8257078_8257878_8257986_8261687_8261845_8261929
transcript_6783.known	chr1	-	2843	15	FSM	ENSG00000066557.6	ENST00000370952.4	2843	15	0	0	0	0	multi-exon	TRUE	canonical	3	290	junction_10	38.9408892700572	362	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAATGTTTATGTTTTCA	-70199756	True	NA	NA	False	AATAAA	-23	NA	70205579	70144804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70145906_70148486_70148673_70151127_70151206_70152432_70152544_70155688_70155797_70159329_70159439_70173464_70173511_70173621_70173710_70175809_70175983_70178850_70178994_70181085_70181210_70184784_70184915_70187264_70187339_70189091_70189274_70205389
transcript_67846.known	chr19	-	580	4	FSM	ENSG00000267855.6	ENST00000301457.3	580	4	0	0	0	0	multi-exon	FALSE	canonical	3	2005	junction_2	83.9616314488681	3669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGGCATGAGCCACCACAC	-8309097	True	NA	53	True	NA	NA	NA	8321375	8311283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8311596_8316495_8316646_8320856_8320907_8321307
transcript_67847.known	chr19	+	1330	4	FSM	ENSG00000233927.5	ENST00000600659.3	1330	4	0	0	0	0	multi-exon	FALSE	canonical	3	9619	junction_1	577.440521227559	107351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTCTGCTGAAGTGTGGTT	8173550	True	NA	30	True	AATAAA	-30	NA	8321495	8323340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8321570_8321655_8321704_8321952_8322092_8322271
transcript_67848.known	chr19	-	1253	5	FSM	ENSG00000167775.11	ENST00000301458.10	1253	5	0	0	0	0	multi-exon	FALSE	canonical	3	1671	junction_4	90.5189897203896	3745	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297546	True	NA	-1	True	ATTAAA	-17	NA	8308358	8302126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8305030_8305157_8308148
transcript_67849.known	chr19	-	1119	4	FSM	ENSG00000167775.11	ENST00000537716.6	1119	4	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_3	857.850155265411	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCTGCCTCTGGGTCTCTG	-8297538	True	NA	-1	True	ATTAAA	-17	NA	8308350	8302126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8302606_8302776_8302981_8303854_8304089_8308148
transcript_67850.known	chr19	-	569	5	FSM	ENSG00000267855.6	ENST00000593729.5	569	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	911.94147290273	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAAGATCCCTGCCCTCCAG	-8309097	True	NA	-2	True	AATAAA	-13	NA	8321375	8308767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8308885_8311411_8311596_8316495_8316646_8320856_8320907_8321307
transcript_67851.known	chr19	+	334	3	FSM	ENSG00000233927.5	ENST00000417088.2	334	3	0	0	0	0	multi-exon	FALSE	canonical	3	9922	junction_2	522.5	5972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCAGGTTCTTGTCTGGGTT	8321622	False	NA	41	True	AATAAA	-21	NA	8321633	8322396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8321704_8321952_8322092_8322271
transcript_67854.known	chr19	+	1590	5	FSM	ENSG00000185236.12	ENST00000328024.11	1590	5	0	0	0	0	multi-exon	FALSE	canonical	3	1192	junction_4	88.7760525141775	1122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCGCTGCGCCTCTGTC	8372683	True	NA	37	True	NA	NA	NA	8390359	8404434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484_8402566_8403412
transcript_67858.known	chr19	+	894	4	FSM	ENSG00000185236.12	ENST00000594216.1	894	4	0	0	0	0	multi-exon	FALSE	canonical	3	1359	junction_1	24.6576560118759	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGCTGGGATTACAGGCGT	8372716	True	NA	NA	False	NA	NA	NA	8390392	8402924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8390457_8399862_8400059_8402085_8402280_8402484
transcript_67869.nnic	chr19	-	825	3	NNC	ENSG00000269386.6	novel	1020	3	NA	NA	-2509	-6	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_2	13	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	-8380314	False	NA	NA	False	AAAAAG	-23	NA	8380336	8374378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_8374609_8376961_8377068_8379847
transcript_67872.known	chr19	-	1013	3	FSM	ENSG00000269386.6	ENST00000593581.6	1020	3	0	7	0	-6	multi-exon	FALSE	canonical	3	16	junction_2	10	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAAAGTGTTCTGAGGTT	-8389970	True	NA	NA	False	AAAAAG	-23	NA	8390685	8374378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8374609_8376961_8377068_8390008
transcript_67873.known	chr19	+	2477	16	FSM	ENSG00000099783.12	ENST00000325495.9	2477	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1132.26468048185	5262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCCTGCTTGTGTGTGCTG	8386062	True	NA	44	True	AATAAA	-17	NA	8444974	8489114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_67874.known	chr19	+	2373	14	FSM	ENSG00000099783.12	ENST00000600806.5	2373	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1398.55107185677	2916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386064	True	NA	40	True	AATAAA	-13	NA	8444976	8489110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8463496_8463505_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_67875.known	chr19	+	2458	15	FSM	ENSG00000099783.12	ENST00000620401.4	2458	15	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_3	957.010929074139	2972	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAACGGCCTGCTTGTGTGT	8386077	True	NA	40	True	AATAAA	-13	NA	8444989	8489110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462590_8463592_8463687_8465323_8465516_8466234_8466389_8467534_8467585_8468773_8468835_8471325_8471428_8473663_8473709_8474166_8474245_8483157_8483212_8485602_8486406_8487023_8487076_8488690
transcript_67876.known	chr19	+	832	10	FSM	ENSG00000099783.12	ENST00000601645.5	832	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1575.31986953699	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATAGGTCCCGCAGGTG	8386081	True	NA	NA	False	AATAAA	-15	NA	8444993	8471410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_8445112_8455404_8455575_8462528_8462582_8463496_8463505_8463592_8463687_8465323_8465363_8466234_8466389_8467534_8467585_8468773_8468835_8471325
transcript_67877.known	chr19	-	633	3	FSM	ENSG00000133246.12	ENST00000599698.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCCCTGCTTCTTGTCTTTT	NA	False	NA	NA	False	CATAAA	-17	NA	8490875	8490055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8490373_8490475_8490510_8490593
transcript_67878.known	chr19	-	2307	8	FSM	ENSG00000133250.14	ENST00000393927.9	2307	8	0	0	0	0	multi-exon	TRUE	canonical	3	210	junction_1	38.1500795730307	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCGTAACCAGGAGAGGTG	-8509035	True	NA	NA	False	AATAAA	-17	NA	8514167	8509677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_8510765_8510850_8511025_8511485_8511537_8511616_8511961_8512386_8512493_8512603_8512712_8513028_8513342_8514043
transcript_67882.nic	chr19	-	956	4	ISM	ENSG00000142347.19	ENST00000644032.2	4180	28	51867	334	1047	-315	3prime_fragment	FALSE	canonical	3	10	junction_2	2.05480466765633	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACGAGTTAACTTACTAAG	-8525540	False	NA	-16	True	AATAAA	-17	NA	8525575	8521111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_8521605_8522376_8522547_8522633_8522830_8525478
transcript_67883.known	chr19	+	4056	7	FSM	ENSG00000130803.15	ENST00000247956.11	4056	7	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	19.5056971734471	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGATATTTCATTGTTTT	9137200	True	NA	10	True	AATAAA	-23	NA	9140396	9163413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9140593_9155924_9156042_9156611_9156749_9157267_9157395_9157979_9158076_9158825_9158909_9160113
transcript_67910.known	chr19	+	2732	7	FSM	ENSG00000188321.14	ENST00000317221.11	2732	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2381652659853	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323163	True	NA	4	True	AATAAA	-18	NA	9324178	9343843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337866_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_67911.known	chr19	+	4675	7	FSM	ENSG00000188321.14	ENST00000603380.6	4675	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	16.6332999331662	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAATACACTTCCCAATT	9323163	True	NA	NA	False	AATAAA	-24	NA	9324178	9345871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9337859_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_67914.known	chr19	+	1488	7	FSM	ENSG00000188321.14	ENST00000592896.5	1488	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	19.1956302897879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTATAAAACACAGGCG	9323181	True	NA	NA	False	NA	NA	NA	9324196	9342465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9337795_9338018_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_67924.known	chr19	+	967	6	FSM	ENSG00000188321.14	ENST00000585352.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	17.6589920437153	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTCAAGATGGAGAAAAA	9323163	True	NA	NA	False	NA	NA	NA	9324178	9342148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341616
transcript_67925.known	chr19	+	2991	6	FSM	ENSG00000188321.14	ENST00000587557.5	2991	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	18.6182705963792	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGATCCTGAGTTATCTCAA	9323760	False	NA	4	True	AATAAA	-18	NA	9323771	9343843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9324229_9324694_9324781_9338493_9338583_9339192_9339320_9341101_9341185_9341694
transcript_67934.nic	chr19	+	1221	2	ISM	ENSG00000188321.14	ENST00000592504.5	1398	6	-408	16627	-1	-13125	5prime_fragment	FALSE	canonical	3	29	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATACTGATCTAGAGA	9323759	False	NA	NA	False	AAAAAG	-11	NA	9323770	9325457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_9324229_9324694
transcript_67939.known	chr19	-	744	2	FSM	ENSG00000283108.2	ENST00000634630.2	968	2	56	168	31	-168	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTATTTTCCACCATTCAT	-9406955	True	NA	NA	False	TTTAAA	-7	NA	9407024	9384906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9385476_9406849
transcript_67944.known	chr19	-	3100	8	FSM	ENSG00000174652.20	ENST00000592292.5	3100	8	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	22.3606797749979	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAGGCAATAAATTTCT	-9433641	True	NA	-36	True	NA	NA	NA	9435504	9412627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9414721_9415653_9415743_9417827_9417909_9418504_9418632_9419050_9419300_9420064_9420219_9435107_9435194_9435283
transcript_67947.known	chr19	-	2815	10	FSM	ENSG00000198028.4	ENST00000301480.5	2815	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	7.25888132047159	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTTTTTTTGATGAGTC	-9498020	True	NA	NA	False	AAAACA	-20	NA	9498616	9466354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9468335_9469104_9469188_9469629_9469711_9470391_9470519_9471295_9471379_9473178_9473260_9474198_9474326_9475283_9475370_9498127_9498216_9498537
transcript_67952.nic	chr19	-	707	3	ISM	ENSG00000198028.4	ENST00000301480.5	2815	10	-1	8476	-1	-6666	5prime_fragment	FALSE	canonical	3	23	junction_2	4	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAATGCCAGGCATGGT	-9498021	True	NA	NA	False	NA	NA	NA	9498617	9474830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_9475370_9498127_9498216_9498537
transcript_67953.nnic	chr19	-	588	3	NNC	ENSG00000198028.4	novel	2815	10	NA	NA	-18	-20919	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	11.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTAATTGGCTCACAGTTC	-9498038	True	NA	NA	False	AATAAA	-5	NA	9498634	9489083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_9489487_9498127_9498216_9498537
transcript_67956.known	chr19	-	7104	8	FSM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_7	8.17162836918577	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAATGTGTGGGGTTCCTT	-9536320	True	NA	-3	True	AATAAA	-19	NA	9538645	9523222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258_9538346_9538574
transcript_67957.nic	chr19	-	2549	7	ISM	ENSG00000130818.12	ENST00000253115.7	7104	8	0	4784	0	0	intron_retention	FALSE	canonical	3	24	junction_6	3.590109871423	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-9536320	True	NA	NA	False	NA	NA	NA	9538645	9528006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9535187_9535280_9536207_9536357_9538258
transcript_67959.known	chr19	-	2402	6	FSM	ENSG00000130818.12	ENST00000593003.5	2402	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	10.283968105746	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAGAAA	-9536265	True	NA	NA	False	NA	NA	NA	9538590	9528006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9529637_9530984_9531068_9532844_9532926_9533839_9533967_9536207_9536357_9538258
transcript_67963.nnic	chr19	+	774	3	NNC	ENSG00000278611.3	novel	909	2	NA	NA	-19	-6	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTGGTGGTC	NA	False	NA	10	True	AATAAA	-16	NA	9538669	9539728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_9538999_9539135_9539258_9539405
transcript_67965.known	chr19	+	859	2	FSM	ENSG00000278611.3	ENST00000619671.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	9538510	True	NA	16	True	AATAAA	-22	NA	9538738	9539734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9538999_9539135
transcript_67966.known	chr19	+	595	2	FSM	ENSG00000278611.3	ENST00000613560.1	595	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTATTGGTGGTCTCTTCA	9538504	True	NA	16	True	AATAAA	-22	NA	9538732	9539734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9538999_9539405
transcript_67971.known	chr19	-	7177	6	FSM	ENSG00000197961.12	ENST00000586602.5	7177	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	32.127247003128	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAATTGTAATAAA	-9576640	True	NA	-36	True	NA	NA	NA	9584497	9560352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9567110_9567647_9567706_9568094_9568176_9569001_9569083_9584185_9584349_9584460
transcript_67981.known	chr19	-	6987	4	FSM	ENSG00000197961.12	ENST00000320451.7	6987	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	13.0724477007517	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTACTTGGGTCAATTTTGT	-9576647	True	NA	-12	True	AATAAA	-17	NA	9584504	9560328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9567110_9568094_9568176_9569001_9569083_9584460
transcript_67997.nnic	chr19	-	931	2	NNC	ENSG00000171469.11	novel	4529	6	NA	NA	-4	0	intron_retention	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGTGGTGATGCATGTCT	-9618666	True	NA	-10	True	AATAAA	-14	NA	9621240	9607328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_9607982_9620962
transcript_67999.known	chr19	-	880	6	FSM	ENSG00000171469.11	ENST00000495503.5	880	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	44.2113107699828	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGTGTAGCAGTTCATACA	-9618621	True	NA	NA	False	NA	NA	NA	9621195	9610936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9611337_9614020_9614104_9617048_9617172_9618090_9618180_9619431_9619583_9621161
transcript_68.known	ERCC-00143	+	767	1	FSM	ERCC-00143A	DQ668362	767	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	49	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00143_+_0_800
transcript_68000.known	chr19	-	578	5	FSM	ENSG00000171469.11	ENST00000444519.5	578	5	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_2	32.4528504141008	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGGGTAAGAGTAACAT	-9618657	True	NA	NA	False	NA	NA	NA	9621231	9617051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9617172_9617620_9617769_9618090_9618180_9619431_9619583_9621161
transcript_68005.known	chr19	-	1712	6	FSM	ENSG00000171466.10	ENST00000590155.5	1712	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.49933330370107	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTAGTCCTAAATGCCTTTT	-9673661	True	NA	-113	True	NA	NA	NA	9675082	9652712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9653879_9656546_9656654_9658008_9658136_9659378_9659468_9660719_9660875_9675014
transcript_6801.known	chr1	+	3784	13	FSM	ENSG00000116754.14	ENST00000370950.7	3784	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	286.250570111029	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGTCCTTATTTATTT	70199760	True	NA	20	True	AATAAA	-21	NA	70205723	70253052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70205781_70221611_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250607
transcript_68013.known	chr19	+	2486	5	FSM	ENSG00000267106.9	ENST00000586614.6	2486	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	34.3465791600852	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620101	True	NA	NA	False	NA	NA	NA	9621504	9635446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9626783_9626861_9627715_9627807_9632227_9632418_9633459
transcript_68016.known	chr19	-	585	5	FSM	ENSG00000171466.10	ENST00000588653.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.71779788708135	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGGAAAAGACAGCATCAGT	-9673665	True	NA	NA	False	NA	NA	NA	9675086	9653757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9653882_9656546_9656654_9658008_9658136_9660719_9660875_9675014
transcript_68017.known	chr19	-	1475	5	FSM	ENSG00000171466.10	ENST00000585688.5	1475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.96419413859206	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAATTCACACTGGGGAG	-9673659	True	NA	NA	False	NA	NA	NA	9675080	9652820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9653879_9656546_9656654_9659378_9659468_9660719_9660875_9675014
transcript_68018.known	chr19	-	583	5	FSM	ENSG00000171466.10	ENST00000587392.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6.80073525436772	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCAAATTTAATCCATG	-9673631	True	NA	NA	False	NA	NA	NA	9675052	9653707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9653882_9658008_9658136_9659378_9659468_9660719_9660875_9675014
transcript_68026.known	chr19	+	2413	4	FSM	ENSG00000267106.9	ENST00000587536.6	2413	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	20.6074420214316	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620083	True	NA	NA	False	NA	NA	NA	9621486	9635446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9626783_9626861_9632227_9632418_9633459
transcript_68027.known	chr19	+	3334	4	FSM	ENSG00000267106.9	ENST00000652787.1	3334	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	34.3446583263767	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620108	True	NA	NA	False	NA	NA	NA	9621511	9635446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9626783_9627807_9632227_9632418_9633459
transcript_68028.known	chr19	+	2411	4	FSM	ENSG00000267106.9	ENST00000588765.5	2411	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	39.8357739838062	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620099	True	NA	NA	False	NA	NA	NA	9621502	9635446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9627715_9627807_9632227_9632418_9633459
transcript_68030.known	chr19	+	2261	3	FSM	ENSG00000267106.9	ENST00000591932.6	2261	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	41	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9621239	True	NA	NA	False	NA	NA	NA	9621266	9635446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621351_9632227_9632418_9633459
transcript_68031.known	chr19	+	2337	3	FSM	ENSG00000267106.9	ENST00000585797.6	2341	3	4	0	-1	0	multi-exon	FALSE	canonical	3	58	junction_1	13.5	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAGTGAGACTCCATCT	9620082	True	NA	NA	False	NA	NA	NA	9621485	9635446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9621646_9632227_9632418_9633459
transcript_68037.nnic	chr19	-	1227	7	NNC	ENSG00000196605.7	novel	2016	6	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.0657918651588	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGGAGAACTTTTCT	-9768712	False	NA	-3	True	AATAAA	-34	NA	9768738	9758473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_9758765_9759859_9759943_9762081_9762169_9762384_9762474_9763281_9763409_9764935_9765036_9768288
transcript_68039.nic	chr19	-	1359	6	NIC	ENSG00000196605.7	novel	2016	6	NA	NA	-228	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_4	9.3936148526539	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTTGGAGAACTTTTCT	NA	False	NA	-3	True	AATAAA	-34	NA	9768962	9758473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_9758765_9759859_9759943_9762081_9762166_9763281_9763409_9764935_9765036_9768288
transcript_68041.known	chr19	-	2016	6	FSM	ENSG00000196605.7	ENST00000397902.6	2016	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	9.41063228481487	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	-9768538	True	NA	NA	False	NA	NA	NA	9768617	9757474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9758765_9759859_9759943_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_68043.known	chr19	-	1621	5	FSM	ENSG00000196605.7	ENST00000586293.5	1621	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	6.28490254498827	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGTTCCTCAGATCTTAGT	-9768279	False	NA	NA	False	NA	NA	NA	9768305	9757474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9758765_9762081_9762169_9763281_9763409_9764935_9765036_9768288
transcript_68045.known	chr19	-	650	2	FSM	ENSG00000196605.7	ENST00000589038.1	650	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGAATGTCATGACTATAA	-9792842	True	NA	-1	True	AATAAA	-22	NA	9793180	9787407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9787811_9792933
transcript_68049.known	chr19	-	1920	4	FSM	ENSG00000127452.9	ENST00000589626.5	1920	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.562405977797	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9818192	True	NA	0	True	ATTAAA	-29	NA	9819079	9810266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9813230_9813275_9818544_9818618_9818727
transcript_6805.known	chr1	+	2385	13	FSM	ENSG00000116754.14	ENST00000370951.5	2385	13	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	271.299598639995	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAAAACCTTATCTCTTG	70199718	True	NA	NA	False	NA	NA	NA	70205681	70251617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249951_70250048_70250364_70250504_70250610
transcript_68050.known	chr19	-	777	4	FSM	ENSG00000127452.9	ENST00000590808.1	777	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	151.400132100339	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGACAGGGCTGGATGCTG	-9816284	True	NA	NA	False	NA	NA	NA	9818816	9811307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9814137_9814343_9818544_9818618_9818727
transcript_68053.known	chr19	-	1873	3	FSM	ENSG00000127452.9	ENST00000247977.9	1873	3	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	11	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGTATTCAGTTTATTCAT	-9818192	True	NA	-3	True	ATTAAA	-26	NA	9819079	9810269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818544_9818618_9818727
transcript_68055.known	chr19	-	544	2	FSM	ENSG00000127452.9	ENST00000586469.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTGGCCGACCTGAGCAT	-9818216	True	NA	NA	False	NA	NA	NA	9819103	9811549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818727
transcript_68056.known	chr19	-	1843	3	FSM	ENSG00000127452.9	ENST00000588922.5	1843	3	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_2	114	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGTATTCAGTTTATTCA	-9818189	True	NA	-4	True	ATTAAA	-25	NA	9819076	9810270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818544_9818618_9818753
transcript_68057.known	chr19	-	1736	2	FSM	ENSG00000127452.9	ENST00000586651.5	1736	2	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTCAGTTTATTCATTCA	-9816297	True	NA	0	True	ATTAAA	-29	NA	9818829	9810266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9811718_9818544
transcript_68058.known	chr19	+	390	5	FSM	ENSG00000198258.11	ENST00000590068.1	390	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2101.30489220389	4268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787947	True	NA	22	True	AATAAA	-14	NA	9827893	9830115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827944_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_68068.known	chr19	+	407	5	FSM	ENSG00000198258.11	ENST00000586895.6	407	5	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	510.830390149216	81669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787971	True	NA	22	True	AATAAA	-14	NA	9827917	9830115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_68069.known	chr19	+	513	5	FSM	ENSG00000198258.11	ENST00000358666.7	513	5	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_1	1840.77706078167	11994	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787945	True	NA	22	True	AATAAA	-14	NA	9827891	9830115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9828065_9828326_9828394_9828591_9828676_9828836_9828875_9829964
transcript_68070.known	chr19	+	320	4	FSM	ENSG00000198258.11	ENST00000593087.1	320	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2032.04532976561	675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTGTTGTTGTCTCTGT	9787968	True	NA	20	True	AATAAA	-12	NA	9827914	9830113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828390_9828836_9828875_9829964
transcript_68071.known	chr19	+	307	3	FSM	ENSG00000198258.11	ENST00000589960.5	307	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1841.5	776	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTTGTTGTCTCTGTAT	9787949	True	NA	22	True	AATAAA	-14	NA	9827895	9830115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828394_9829964
transcript_68072.known	chr19	+	1450	4	FSM	ENSG00000198258.11	ENST00000589372.1	1450	4	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	578.370892152163	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTGTAAAAACTCACCTT	9787979	True	NA	-17	True	NA	NA	NA	9827925	9830076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326_9828394_9828591_9828676_9828836
transcript_68073.known	chr19	+	546	2	FSM	ENSG00000198258.11	ENST00000588595.5	546	2	0	0	0	0	multi-exon	FALSE	canonical	3	3703	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTATCTCTGAAATGTCT	9787971	True	NA	NA	False	NA	NA	NA	9827917	9828805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9827985_9828326
transcript_68074.known	chr19	-	750	2	FSM	ENSG00000267289.1	ENST00000591174.1	750	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGGCTCGGTGGCTCACA	-9835002	True	NA	NA	False	AATAAA	-23	NA	9835013	9834078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9834679_9834863
transcript_68078.known	chr19	+	702	6	FSM	ENSG00000127445.14	ENST00000590540.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	859.245855387153	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9815183	True	NA	13	True	ATTAAA	-13	NA	9835339	9849682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_68087.known	chr19	+	536	5	FSM	ENSG00000127445.14	ENST00000589058.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	910.249519362686	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGCCTCGGGGCAGGGC	9815212	False	NA	NA	False	NA	NA	NA	9835368	9849214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9836822_9836876_9838435_9838649_9848029_9848141_9849089
transcript_68089.known	chr19	+	755	5	FSM	ENSG00000127445.14	ENST00000586352.5	755	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	926.297839520313	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCGACCGCCAGATTCTCC	9815189	True	NA	NA	False	NA	NA	NA	9835345	9849399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9838011_9838076_9838435_9838649_9848029_9848141_9849089
transcript_68094.known	chr19	+	1009	4	FSM	ENSG00000127445.14	ENST00000247970.9	1009	4	0	0	0	0	multi-exon	FALSE	canonical	3	1813	junction_3	99.9344229426922	6284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGTGTCTCATTTCTC	9815161	True	NA	20	True	ATTAAA	-20	NA	9835317	9849689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089
transcript_68095.known	chr19	+	648	5	FSM	ENSG00000127445.14	ENST00000588695.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_4	721.269843747817	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9815184	True	NA	13	True	ATTAAA	-13	NA	9835340	9849682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9835403_9838435_9838649_9848029_9848141_9849089_9849202_9849532
transcript_68096.known	chr19	+	533	4	FSM	ENSG00000127445.14	ENST00000591777.1	533	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	864.769847351819	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTGCTCTCCTGTGTCTC	9838493	True	NA	13	True	ATTAAA	-13	NA	9838598	9849682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_9838649_9848029_9848141_9849089_9849312_9849532
transcript_68097.known	chr19	-	1982	6	FSM	ENSG00000105088.9	ENST00000264833.9	1982	6	0	0	0	0	multi-exon	FALSE	canonical	3	682	junction_1	19.6020407100893	504	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCTTCGGTGACTGTGTGTG	-9932493	True	NA	-6	True	AATAAA	-20	NA	9936515	9853717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9854864_9856806_9856914_9857262_9857483_9857714_9857862_9860644_9860795_9936303
transcript_68098.known	chr19	-	6207	67	FSM	ENSG00000080573.7	ENST00000264828.4	6207	67	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_9	3.65050910320469	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGTCTCTGTGTATTTC	NA	False	NA	-1	True	AATAAA	-14	NA	10010504	9959560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_9960558_9960650_9960891_9962818_9962888_9966313_9966427_9966535_9966747_9967346_9967401_9967903_9967940_9968025_9968080_9968384_9968493_9968674_9968729_9969348_9969403_9969574_9969683_9969868_9969923_9970621_9970676_9970974_9971029_9971204_9971259_9972918_9973027_9973569_9973624_9973755_9973810_9973918_9973973_9974170_9974225_9974300_9974409_9976557_9976612_9977228_9977283_9977364_9977473_9977593_9977702_9978573_9978628_9978890_9978981_9979131_9979240_9979363_9979418_9979838_9979893_9979993_9980048_9980647_9980693_9980805_9980860_9981087_9981133_9982064_9982119_9985841_9985896_9986314_9986423_9986552_9986607_9986713_9986759_9989123_9989178_9989321_9989367_9989468_9989523_9991609_9991655_9991787_9991842_9992003_9992049_9992826_9992881_9993022_9993068_9993379_9993434_9993618_9993673_9993752_9993807_9995563_9995618_9996065_9996120_9996205_9996263_9996432_9996517_9996614_9996690_9997370_9997434_9997983_9998026_9998101_9998150_10001523_10001671_10001767_10001882_10003564_10003715_10004040_10004146_10005557_10005715_10005795_10005986_10006072_10006232_10010297
transcript_68100.known	chr19	+	1481	6	FSM	ENSG00000080511.5	ENST00000591589.3	1481	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTAGTTACATTTACTAT	NA	False	NA	NA	False	ATTAAA	-20	NA	10013482	10022279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10013601_10017056_10017216_10018730_10018911_10020708_10020803_10021254_10021439_10021533
transcript_68104.nnic	chr19	+	669	5	FSM	ENSG00000167798.18	ENST00000688591.1	702	5	23	10	1	0	multi-exon	FALSE	canonical	2	3	junction_3	1.78535710713571	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACCCTGGACATTTGTCCC	NA	False	NA	NA	False	AATAAA	-21	NA	10071389	10074135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10071527_10072923_10073011_10073089_10073180_10073299_10073436_10073916
transcript_68105.nnic	chr19	+	1051	5	FSM	ENSG00000167798.18	ENST00000688591.1	702	5	23	-372	1	372	multi-exon	FALSE	canonical	2	3	junction_3	1.78535710713571	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGTTGAGGATTTTTG	NA	False	NA	NA	False	NA	NA	NA	10071389	10074517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10071527_10072923_10073011_10073089_10073180_10073299_10073436_10073916
transcript_68112.known	chr19	+	1928	8	FSM	ENSG00000130813.18	ENST00000253110.16	1928	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_6	41.5893432189997	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCAGAGGGGCGTCT	10083664	True	NA	11	True	AATAAA	-17	NA	10086316	10093243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091475_10091631_10092069
transcript_68115.known	chr19	+	1481	8	FSM	ENSG00000130813.18	ENST00000591813.5	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_6	55.2700236132036	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGCCCTGGCCCCCCAA	10083687	True	NA	NA	False	AATACA	-33	NA	10086339	10092927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091354_10091583_10091631_10092069
transcript_68120.known	chr19	+	2079	7	FSM	ENSG00000130813.18	ENST00000585919.5	2079	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	21.5148527508066	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGCGTCTTACCTACCC	10083644	True	NA	20	True	AATAAA	-26	NA	10086296	10093252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10086449_10086928_10087053_10087250_10087301_10089656_10089696_10089897_10090048_10091249_10091631_10092069
transcript_68130.known	chr19	-	1103	11	FSM	ENSG00000130811.12	ENST00000253108.9	1103	11	0	0	0	0	multi-exon	FALSE	canonical	3	1901	junction_4	121.602796020486	5978	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTTCTTTTTGTTCTTG	-10088965	True	NA	-5	True	AATAAA	-19	NA	10119899	10115013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966_10116075_10116799_10116990_10117083_10117189_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_68172.known	chr19	-	537	6	FSM	ENSG00000130811.12	ENST00000587681.5	537	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	828.547500147095	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTCTCGAACTCCTGACCTC	-10088974	True	NA	NA	False	NA	NA	NA	10119908	10118369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653_10119701_10119839
transcript_68175.known	chr19	+	2302	12	FSM	ENSG00000130810.20	ENST00000253107.12	2302	12	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_9	66.6611016961079	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAAGAGAATCACTTAAAC	10091390	True	NA	46	True	NA	NA	NA	10106361	10112012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10106413_10106500_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_68176.known	chr19	+	1575	11	FSM	ENSG00000130810.20	ENST00000393793.5	1575	11	0	0	0	0	multi-exon	FALSE	canonical	3	883	junction_8	69.699067425612	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCCCAGCCCTTCCACTC	10091447	True	NA	2	True	CATAAA	-8	NA	10106418	10111254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10106672_10107504_10107607_10107803_10107855_10107963_10108135_10109630_10109708_10109912_10110021_10110122_10110247_10110323_10110403_10110484_10110615_10110696_10110867_10110944
transcript_68177.known	chr19	-	1034	4	FSM	ENSG00000130811.12	ENST00000590158.1	1034	4	0	0	0	0	multi-exon	FALSE	canonical	3	2078	junction_2	25.0377492776186	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCGAGAGCGCGGGCTCCAA	-10085754	False	NA	-53	True	NA	NA	NA	10116688	10115061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10115130_10115478_10115586_10115683_10115821_10115966
transcript_68178.known	chr19	-	762	5	FSM	ENSG00000130811.12	ENST00000590940.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	918.528850935015	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTCTTTTAATTTTTT	-10088766	False	NA	65	True	AATAAA	-37	NA	10119700	10118075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10118558_10118667_10118728_10118867_10118957_10119087_10119172_10119653
transcript_68179.known	chr19	-	5408	40	FSM	ENSG00000130816.17	ENST00000340748.8	5408	40	0	0	0	0	multi-exon	TRUE	canonical	3	468	junction_36	83.2966941150313	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGGGTGGGTATTCGTGA	NA	False	NA	47	True	AATAAA	-17	NA	10195135	10133345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10133702_10134216_10134308_10135735_10135853_10136120_10136288_10137084_10137281_10137831_10138010_10138438_10138606_10139675_10139818_10140045_10140329_10140780_10140910_10141104_10141190_10142027_10142221_10143765_10143988_10146350_10146525_10148883_10149018_10149452_10149658_10149852_10149969_10151397_10151546_10151749_10151848_10154292_10154480_10154585_10154774_10154904_10155057_10155852_10155946_10156390_10156510_10159657_10159768_10159841_10159923_10160017_10160064_10160383_10160419_10162666_10162749_10163325_10163361_10166597_10166686_10168329_10168365_10173089_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_68180.nic	chr19	-	838	9	ISM	ENSG00000130816.17	ENST00000359526.9	5274	41	-16	39744	-14	0	5prime_fragment	FALSE	canonical	3	119	junction_5	176.84204640017	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAAGCTCTATCACCTCTA	-10184116	True	NA	27	True	AAGAAA	-12	NA	10194969	10173089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10173175_10173870_10173906_10175539_10175619_10177291_10177368_10180186_10180235_10180349_10180570_10180777_10180886_10182040_10182078_10194819
transcript_68193.known	chr19	+	1218	9	FSM	ENSG00000105364.14	ENST00000253099.11	1218	9	0	0	0	0	multi-exon	FALSE	canonical	3	1042	junction_8	74.1788379526129	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAACTTCTCAGTGTCATT	10235607	True	NA	20	True	AATAAA	-28	NA	10252213	10260055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608_10258686_10259616
transcript_68195.known	chr19	+	1423	8	FSM	ENSG00000105364.14	ENST00000590669.5	1423	8	0	0	0	0	multi-exon	FALSE	canonical	3	1121	junction_4	56.3856979984775	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCAAAGTCACCTCTGTC	10251681	False	NA	NA	False	NA	NA	NA	10252009	10259125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412_10258523_10258608
transcript_68201.nic	chr19	+	1328	7	ISM	ENSG00000105364.14	ENST00000590669.5	1423	8	169	12	-35	-12	intron_retention	FALSE	canonical	3	1121	junction_4	59.5186712067921	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGCTCCAAA	10251850	False	NA	NA	False	NA	NA	NA	10252178	10259113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_10252311_10252396_10252464_10252550_10252702_10254588_10254641_10256707_10256826_10258221_10258329_10258412
transcript_68203.known	chr19	+	2967	7	FSM	ENSG00000090339.9	ENST00000264832.8	2967	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	4.50924975282289	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTTGTGTGAGTTGAG	10270838	True	NA	11	True	AATAAA	-16	NA	10271119	10286615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10271227_10274764_10275029_10283480_10283787_10284032_10284321_10284402_10284658_10284782_10285029_10285114
transcript_68206.known	chr19	+	552	3	FSM	ENSG00000105364.14	ENST00000588963.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	3	1164	junction_1	28	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGGCACATAATAAGTTC	10252140	False	NA	NA	False	AATAAA	-9	NA	10252304	10253029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10252311_10252396_10252464_10252550
transcript_68208.known	chr19	+	1290	3	FSM	ENSG00000105371.10	ENST00000380770.5	1290	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	2.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCTGTCCTGTGACCTAA	10286797	True	NA	19	True	AATAAA	-15	NA	10286954	10288520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10287407_10287535_10287839_10287985
transcript_68209.known	chr19	+	1176	3	FSM	ENSG00000105371.10	ENST00000340992.4	1176	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	7	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGGCTTCCTTAACCAGC	10286816	True	NA	1	True	AATAAA	-41	NA	10286973	10288502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10287407_10287612_10287839_10287985
transcript_68211.known	chr19	+	1390	2	FSM	ENSG00000105371.10	ENST00000393717.2	1390	2	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTGTCCTGTGACCTAAGG	10286846	False	NA	21	True	AATAAA	-17	NA	10287003	10288522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10287407_10287535
transcript_68212.known	chr19	-	3586	13	FSM	ENSG00000161847.14	ENST00000611074.4	3586	13	0	0	0	0	multi-exon	FALSE	canonical	3	618	junction_10	51.7807879430199	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAAATCAGAGTTGGCTG	-10333116	False	NA	NA	False	ATTAAA	-21	NA	10333638	10316218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10317601_10317689_10317774_10318228_10318373_10319165_10319241_10320654_10320952_10321047_10321260_10321530_10321619_10322644_10322740_10323144_10323275_10323374_10323567_10328641_10329112_10330459_10330527_10333288
transcript_68215.known	chr19	-	1735	7	FSM	ENSG00000076662.10	ENST00000160262.10	1735	7	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_4	49.5939064357261	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339102	False	522	0	True	AATAAA	-18	NA	10339624	10333775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10334060_10334159_10334409_10334527_10334783_10335065_10335354_10335670_10335977_10338681_10338949_10339538
transcript_68227.nic	chr19	-	1022	3	ISM	ENSG00000076662.10	ENST00000592439.1	905	5	757	-199	-293	0	3prime_fragment	FALSE	canonical	3	146	junction_1	7	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10334494	False	NA	0	True	AATAAA	-18	NA	10335016	10333775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10334060_10334159_10334409_10334527
transcript_68228.known	chr19	-	658	3	FSM	ENSG00000076662.10	ENST00000592945.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	79.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTGGTTTGATTCCAC	-10334201	False	NA	-2	True	AATAAA	-16	NA	10334723	10333777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10334060_10334228_10334409_10334527
transcript_68229.known	chr19	+	2813	1	FSM	ENSG00000274425.1	ENST00000612689.1	2813	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACGTTTATGACTATGAT	10333376	False	NA	16	True	AATAAA	-22	NA	10333435	10336248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10333400_10336200
transcript_68230.known	chr19	-	1012	5	FSM	ENSG00000267673.6	ENST00000393708.3	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_4	71.820957944043	1061	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTGGAGTGGTGGTAAGTG	-10312653	True	NA	NA	False	AGTAAA	-6	NA	10316015	10310044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315493_10315704_10315760_10315851
transcript_68231.known	chr19	-	773	4	FSM	ENSG00000267673.6	ENST00000492239.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	198.236110624567	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCCAGCATGTTGAGTGTC	-10315784	False	NA	-8	True	AATAAA	-13	NA	10315795	10310216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10310643_10310852_10310941_10315385_10315554_10315704
transcript_68232.known	chr19	-	584	2	FSM	ENSG00000267673.6	ENST00000486454.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAACCCACAAAT	-10312644	True	NA	NA	False	NA	NA	NA	10316006	10315330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10315760_10315851
transcript_68233.known	chr19	-	2491	4	FSM	ENSG00000076662.10	ENST00000587992.1	2491	4	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	36.1109401705356	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGGTTTGATTCCACCC	-10339139	False	NA	0	True	AATAAA	-18	NA	10339661	10333775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10334060_10334159_10335977_10338681_10338949_10339538
transcript_68234.known	chr19	-	4243	25	FSM	ENSG00000105397.14	ENST00000525621.6	4243	25	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	23.0125267819266	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10379022	True	NA	-12	True	AATAAA	-16	NA	10380572	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353527_10353647_10354041_10354235_10354511_10354610_10356567_10356719_10357763_10357919_10358002_10358139_10359174_10359303_10361510_10361599_10361769_10361956_10362077_10362182_10362263_10362457_10362548_10362658_10364613_10364772_10364850_10365049_10365516_10365899_10366416_10366581_10368054_10368203_10368294_10368419_10378213_10378427_10379614_10379780_10380379
transcript_68238.nnic	chr19	-	969	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	134	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	47.7336359394505	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353402	True	NA	-12	True	AATAAA	-16	NA	10353944	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353813
transcript_68239.nnic	chr19	-	907	5	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	108	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_4	47.7336359394505	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353856	False	NA	-12	True	AATAAA	-16	NA	10353970	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925_10353099_10353901
transcript_68243.nic	chr19	-	1661	4	ISM	ENSG00000105397.14	ENST00000527481.2	628	6	601	-414	157	0	3prime_fragment	FALSE	canonical	3	61	junction_3	35.6931365951495	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353379	True	NA	-12	True	AATAAA	-16	NA	10353921	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10350969_10351051_10351163_10352433_10352552_10352925
transcript_68246.nnic	chr19	-	711	4	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	131	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	57.567351858497	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353405	True	NA	-12	True	AATAAA	-16	NA	10353947	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10352433_10352552_10353901
transcript_6826.nic	chr1	+	1065	9	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	6802	-12	-5910	5prime_fragment	FALSE	canonical	3	220	junction_1	286.178593713786	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATAGCATTGGGTGAGAAA	70199706	True	NA	16	True	AAAACA	-3	NA	70205669	70244815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683
transcript_68260.nnic	chr19	-	686	3	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	126	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	70	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353410	True	NA	-12	True	AATAAA	-16	NA	10353952	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10353813
transcript_68261.nnic	chr19	-	597	3	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	127	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	70	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353409	True	NA	-12	True	AATAAA	-16	NA	10353951	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10351051_10351163_10353901
transcript_68266.known	chr19	-	767	2	FSM	ENSG00000105397.14	ENST00000530220.1	767	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10353142	False	542	-12	True	AATAAA	-16	NA	10353256	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10350969_10352925
transcript_68267.nnic	chr19	-	834	2	NNC	ENSG00000105397.14	novel	3456	21	NA	NA	-108	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10354097	False	NA	-12	True	AATAAA	-16	NA	10354211	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10350969_10353813
transcript_68268.nic	chr19	-	735	2	ISM	ENSG00000105397.14	ENST00000530560.5	558	4	2273	-215	182	0	3prime_fragment	FALSE	canonical	3	43	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	NA	False	NA	-12	True	AATAAA	-16	NA	10354340	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_10350969_10354041
transcript_68269.known	chr19	-	495	2	FSM	ENSG00000105397.14	ENST00000525976.5	495	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGAGCCTGTGATTTTTGG	-10352378	False	NA	-12	True	AATAAA	-16	NA	10352492	10350532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10350969_10352433
transcript_68277.nic	chr19	+	1588	4	ISM	ENSG00000065989.16	ENST00000344979.7	2579	10	8505	0	2475	0	3prime_fragment	TRUE	canonical	3	38	junction_2	2.44948974278318	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAACTGTAGATGCTCCTGT	10461199	True	NA	77	True	AAAAAG	-34	NA	10461443	10467931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_10461681_10461876_10462000_10463792_10463976_10466886
transcript_68283.known	chr19	-	1618	8	FSM	ENSG00000105401.9	ENST00000222005.7	1618	8	0	0	0	0	multi-exon	FALSE	canonical	3	1137	junction_5	106.673639227892	2279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGCTGCTGGGAGGGCC	-10379778	True	NA	-28	True	AATAAA	-16	NA	10403542	10391132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395344_10395434_10395544_10395927_10396204_10403377
transcript_68284.known	chr19	-	1377	7	FSM	ENSG00000105401.9	ENST00000591248.5	1377	7	0	0	0	0	multi-exon	FALSE	canonical	3	1342	junction_5	50.2449555234708	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCGCTGCTCGGCCCAGCC	-10379766	True	NA	11	True	AAAACA	-38	NA	10403530	10391452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10391707_10393085_10393158_10393258_10393442_10395020_10395144_10395227_10395544_10395927_10396204_10403377
transcript_68287.known	chr19	-	2648	6	FSM	ENSG00000079999.14	ENST00000393623.6	2648	6	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_5	70.382952481407	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGGCTCTGGGCTGGAG	-10502886	False	NA	-8	True	AATAAA	-24	NA	10502896	10486125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10502696
transcript_68288.known	chr19	-	2565	6	FSM	ENSG00000079999.14	ENST00000171111.10	2565	6	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_5	166.428843653977	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGCTCTGGGCTGGAGG	-10502570	True	NA	-7	True	AATAAA	-25	NA	10503356	10486124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10486819_10489191_10489369_10489647_10489854_10491576_10492263_10499394_10500081_10503240
transcript_68293.known	chr19	-	3005	19	FSM	ENSG00000129347.21	ENST00000652042.1	3005	19	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_4	25.0843023068656	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562632	True	NA	-7	True	AATAAA	-24	NA	10566026	10553084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557683_10557768_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_68295.known	chr19	-	2545	18	FSM	ENSG00000129347.21	ENST00000478863.5	2545	18	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.8067955504685	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAACACGTGTAGCTG	-10562577	True	NA	NA	False	NA	NA	NA	10565971	10553575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565035_10565716_10565791_10565905
transcript_68299.known	chr19	-	3744	17	FSM	ENSG00000129347.21	ENST00000536689.5	3744	17	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_9	21.566394575821	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCATCCCCTCCCTTTA	-10562603	True	NA	-7	True	AATAAA	-24	NA	10565997	10553084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10554282_10555086_10555186_10555284_10555350_10557551_10557896_10557971_10558061_10558163_10558240_10559358_10559530_10559612_10559709_10559809_10559937_10560311_10560449_10561002_10561081_10561168_10561266_10561666_10561717_10561790_10561846_10562728_10562838_10564928_10565791_10565905
transcript_68300.known	chr19	-	1086	3	FSM	ENSG00000129355.7	ENST00000335766.2	1086	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	9	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATATTCTGTTGGAAGCTTGT	-10569042	False	NA	NA	False	NA	NA	NA	10569059	10566600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10567418_10568512_10568669_10568946
transcript_6831.nic	chr1	+	849	7	ISM	ENSG00000116754.14	ENST00000370951.5	2385	13	-12	14067	-12	0	5prime_fragment	FALSE	canonical	3	220	junction_1	302.028512267008	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAACAATGTTTATGCA	70199706	True	NA	65	True	NA	NA	NA	70205669	70237550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_70205781_70221614_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424
transcript_68310.known	chr19	-	544	4	FSM	ENSG00000129354.12	ENST00000587069.5	544	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	509.971458896367	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10572125	False	NA	-10	True	ATTAAA	-13	NA	10577314	10572670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10572896_10574416_10574493_10574903_10575030_10577197
transcript_68311.known	chr19	-	1757	12	FSM	ENSG00000129354.12	ENST00000590923.5	1757	12	0	0	0	0	multi-exon	TRUE	canonical	3	154	junction_6	284.910860353036	3875	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTGCCTATGTGCTTGT	-10582126	True	NA	-10	True	ATTAAA	-13	NA	10587315	10572670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10573089_10574416_10574493_10574903_10575030_10577197_10577357_10578891_10578964_10579715_10579865_10581265_10581393_10581486_10581635_10581747_10581879_10583605_10583674_10583913_10584071_10587189
transcript_68312.known	chr19	-	510	3	FSM	ENSG00000129354.12	ENST00000589348.1	510	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	563.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAAAAGATGAATCTAGC	-10572042	False	NA	-28	True	NA	NA	NA	10577231	10572688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10573089_10574416_10574493_10577197
transcript_68317.known	chr19	+	3301	22	FSM	ENSG00000129353.15	ENST00000407327.8	3301	22	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_1	105.290226260711	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGGTCCAGGCCTGGTGTG	10599345	True	NA	12	True	AATAAA	-12	NA	10602509	10644550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10602562_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_68320.known	chr19	+	3784	22	FSM	ENSG00000129353.15	ENST00000586078.5	3784	22	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_21	110.033101595438	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618080	True	NA	19	True	AATAAA	-19	NA	10625524	10644557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10642896
transcript_68322.known	chr19	+	3374	22	FSM	ENSG00000129353.15	ENST00000335757.10	3374	22	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_1	66.3069889230792	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGGCCTGGTGTGTTTGTTG	10618108	True	NA	19	True	AATAAA	-19	NA	10625552	10644557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10625671_10626252_10626302_10627721_10627796_10627919_10628005_10631056_10631142_10631274_10631386_10631474_10631536_10631625_10631750_10631867_10631952_10632043_10632157_10634755_10634888_10634973_10635074_10635162_10635256_10635430_10635516_10636322_10636586_10636661_10636757_10637643_10637748_10637855_10637930_10638022_10638094_10638226_10638316_10642366_10642452_10643278
transcript_68334.nnic	chr19	-	1551	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-21	-3	multi-exon	FALSE	canonical	1	6	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCAGTCTCTCTGGTCCTTTG	-10651506	True	NA	-7	True	AATAAA	-18	NA	10653865	10651864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_10653269_10653718
transcript_68335.nnic	chr19	-	1056	2	Genic_Genomic	ENSG00000267100.1	novel	1983	1	NA	NA	-21	-498	multi-exon	FALSE	canonical	1	6	junction_1	0	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAGAAGTGTAA	-10651506	True	NA	NA	False	NA	NA	NA	10653865	10652359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_10653269_10653718
transcript_68337.known	chr19	-	1983	1	FSM	ENSG00000267100.1	ENST00000591501.1	1983	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	405	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTCTGGTCCTTTGTTT	-10651485	True	NA	-4	True	AATAAA	-21	NA	10653844	10651861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10651900_10653800
transcript_68338.known	chr19	+	6119	20	FSM	ENSG00000129351.17	ENST00000449870.5	6119	20	0	0	0	0	multi-exon	FALSE	canonical	3	537	junction_17	393.978766811184	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATGCGTTCGTTCATTTT	10624864	True	NA	35	True	AATAAA	-35	NA	10654260	10692417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10687345_10687709_10688549_10688679_10689178
transcript_68349.known	chr19	+	3671	18	FSM	ENSG00000129351.17	ENST00000407004.7	3671	18	0	0	0	0	multi-exon	FALSE	canonical	3	600	junction_13	256.409396369776	854	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTCGGCCCTTGCGTCTT	10624931	True	NA	40	True	AATACA	-15	NA	10654327	10685765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683124_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_68352.known	chr19	+	2622	18	FSM	ENSG00000129351.17	ENST00000589998.5	2622	18	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_13	188.114832778861	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGGCAAAAGCCCACCTTTG	10624964	True	NA	-60	True	NA	NA	NA	10654360	10684761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218_10681330_10681992_10682193_10682536_10682705_10683136_10683263_10683365_10683543_10683635_10683790_10683916_10683971_10684415
transcript_68366.nic	chr19	+	1510	11	NIC	ENSG00000129351.17	novel	3866	16	NA	NA	-77	0	combination_of_known_junctions	FALSE	canonical	3	379	junction_1	342.923446267531	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAGAAGATTCAGAAGA	10654550	False	NA	30	True	NA	NA	NA	10654860	10681306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815_10679928_10680345_10680444_10681018_10681131_10681218
transcript_6837.known	chr1	+	617	3	FSM	ENSG00000116754.14	ENST00000463877.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	457	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAATTAGGTCTGTTATTAT	70199734	True	NA	NA	False	NA	NA	NA	70205697	70228727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70205781_70221611_70221840_70228421
transcript_68374.known	chr19	+	953	8	FSM	ENSG00000129351.17	ENST00000590009.5	953	8	0	0	0	0	multi-exon	FALSE	canonical	3	379	junction_1	390.124417621468	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATCCATTGGCACG	10650550	True	NA	NA	False	NA	NA	NA	10655023	10679831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10655124_10670515_10670609_10670973_10671204_10671357_10671536_10677162_10677311_10678612_10678705_10679096_10679193_10679815
transcript_68375.known	chr19	+	839	6	FSM	ENSG00000129351.17	ENST00000589600.5	839	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	698.718369588205	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTCCATTGTCCCTGACCA	10624985	False	NA	NA	False	GATAAA	-13	NA	10654381	10677236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10654488_10666491_10666650_10670515_10670609_10670973_10671204_10671357_10671536_10677162
transcript_68382.known	chr19	+	1329	10	FSM	ENSG00000213339.9	ENST00000250237.10	1329	10	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_6	46.4234402265616	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGAGTGTGTCTGTGTCTTC	10696619	True	NA	26	True	NA	NA	NA	10701438	10713365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712300_10712552_10712629_10712757_10712868_10712952_10713041_10713117
transcript_68391.known	chr19	+	1571	9	FSM	ENSG00000213339.9	ENST00000589488.5	1571	9	0	0	0	0	multi-exon	FALSE	canonical	3	385	junction_5	40.5322017043239	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTTTTATTGTAACTTA	10696610	True	NA	6	True	GGGGCT	-31	NA	10701429	10713345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10701704_10701949_10702019_10702115_10702255_10707301_10707381_10707499_10707616_10712160_10712629_10712757_10712868_10712952_10713041_10713117
transcript_68417.known	chr19	+	540	3	FSM	ENSG00000213339.9	ENST00000587500.5	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	478	junction_1	27	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACAGAGTGTGTCTGTGTCTT	10712652	False	NA	25	True	NA	NA	NA	10712662	10713364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10712868_10712952_10713041_10713117
transcript_68418.nnic	chr19	-	1213	4	NNC	ENSG00000099203.7	novel	1633	4	NA	NA	15	249	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_3	151.587158646987	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGAGCCTGCTGATTGGGG	-10832442	False	3175	0	True	AATAAA	-18	NA	10835617	10832437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_10833214_10834933_10835118_10835255_10835354_10835462
transcript_68420.known	chr19	-	541	4	FSM	ENSG00000099203.7	ENST00000588289.1	541	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	162.411685403346	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAGGAAGAACGGGACAAA	-10832457	False	3175	NA	False	NA	NA	NA	10835632	10832984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10835602
transcript_68421.known	chr19	-	1633	4	FSM	ENSG00000099203.7	ENST00000214869.7	1633	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_1	8.98146239020499	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGAGTGGCTTCCTCTGAAA	-10833037	True	NA	NA	False	AGTAAA	-15	NA	10836212	10832066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10833214_10834933_10835118_10835255_10835354_10836008
transcript_68423.known	chr19	+	1060	8	FSM	ENSG00000214212.9	ENST00000592854.5	1060	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	1.04978131833565	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGAGGAAAGGAAGGGGAA	10836534	True	NA	NA	False	GGGGCT	-28	NA	10836574	10869470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10836771_10848440_10848540_10850258_10850568_10856264_10856358_10858315_10858344_10859914_10859959_10863169_10863208_10869217
transcript_68424.known	chr19	-	2087	10	FSM	ENSG00000130733.11	ENST00000253031.6	2087	10	0	0	0	0	multi-exon	TRUE	canonical	3	71	junction_9	82.8860589329237	538	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCGTTGTGACCGAGGCC	-10925343	True	NA	-4	True	AATAAA	-22	NA	10928681	10922184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928584
transcript_68433.known	chr19	-	2111	10	FSM	ENSG00000130733.11	ENST00000586748.6	2111	10	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_9	34.231239793174	655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGTCACGTCCGTTGTGA	-10925301	True	NA	-12	True	AATAAA	-14	NA	10928639	10922192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_10923175_10923271_10923408_10923494_10923678_10923832_10924000_10924075_10924193_10925685_10925774_10927629_10927717_10927798_10927960_10928379_10928441_10928510
transcript_68434.known	chr19	+	859	2	FSM	ENSG00000142444.7	ENST00000588807.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCAGGTGGTAAAACAACTA	10929599	False	NA	0	True	AATAAA	-1	NA	10929620	10933515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_10930325_10933360
transcript_68436.known	chr19	+	1865	6	FSM	ENSG00000127616.20	ENST00000643929.1	1865	6	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_1	380.94430039049	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTAATAAATTAAACCAACA	11040608	False	NA	-9	True	NA	NA	NA	11040643	11062247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11041561_11058257_11058364_11058787_11058890_11059752_11059886_11060044_11060188_11061783
transcript_68455.known	chr19	-	2315	5	FSM	ENSG00000161888.12	ENST00000592540.6	2290	5	-26	1	-1	-1	multi-exon	FALSE	canonical	3	17	junction_1	8.86002257333467	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGGGCCGGCCAATCA	-11147778	True	NA	-15	True	AATAAA	-22	NA	11155808	11145493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11147290_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_68456.known	chr19	-	833	5	FSM	ENSG00000161888.12	ENST00000592967.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.5462171841441	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCACTGTAGAAGGCAGAGG	-11147735	True	NA	NA	False	AAAAAG	-40	NA	11155765	11146021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11146431_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_68458.nnic	chr19	-	871	5	NIC	ENSG00000161888.12	novel	832	5	NA	NA	-34	14	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	15.182226450689	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCATGCCTGTGA	-11147811	False	NA	-24	True	ATTAAA	-15	NA	11155841	11145908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_11146280_11147869_11147895_11148012_11148118_11149093_11149239_11155616
transcript_6846.known	chr1	+	1408	11	ISM	ENSG00000116754.14	ENST00000395136.7	1717	12	0	413	0	-333	5prime_fragment	FALSE	canonical	3	45	junction_9	307.845561930004	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GACAAAGAAAGAAGTAGGGA	70209089	True	NA	-6	True	CATAAA	-22	NA	70221395	70250392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_70221840_70228421_70228556_70232267_70232378_70234695_70234789_70235500_70235551_70237424_70237553_70239438_70239521_70244683_70244816_70246817_70246908_70249930_70250048_70250364
transcript_68465.known	chr19	-	832	5	FSM	ENSG00000161888.12	ENST00000591396.5	832	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.5944701737507	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTGGCCTGGTGTGGTG	-11147734	True	NA	-38	True	ATTAAA	-1	NA	11155764	11145922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11146280_11147817_11147895_11148012_11148118_11149093_11149239_11155616
transcript_6847.known	chr1	+	668	3	FSM	ENSG00000116754.14	ENST00000469170.5	668	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	477	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAGTTTAATTGTATTA	70209173	True	NA	NA	False	NA	NA	NA	70221479	70231268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70221840_70228421_70228556_70231094
transcript_68474.known	chr19	-	699	4	FSM	ENSG00000161888.12	ENST00000585486.1	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	5.43650214343336	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGCAGGCCAAGTGTGGTAC	-11147739	True	NA	NA	False	AATAAA	-13	NA	11155769	11147598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11147895_11148012_11148118_11149093_11149239_11155616
transcript_68479.known	chr19	-	378	3	FSM	ENSG00000161888.12	ENST00000586708.1	378	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGATCCATTTCAAATGAAA	-11147731	True	NA	NA	False	NA	NA	NA	11155761	11147133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11147290_11147817_11147895_11155616
transcript_68480.nic	chr19	-	537	3	ISM	ENSG00000161888.12	ENST00000585486.1	699	4	-72	352	-34	-352	5prime_fragment	FALSE	canonical	3	36	junction_1	2	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTGCTGGGTAACTTTC	-11147811	False	NA	NA	False	NA	NA	NA	11155841	11147950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11148118_11149093_11149239_11155616
transcript_68482.known	chr19	+	5173	18	FSM	ENSG00000130164.14	ENST00000558518.6	5173	18	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_4	34.6482073114352	98	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTCTAAACTCGATGCAC	11080788	True	NA	19	True	ATTAAA	-18	NA	11089462	11133820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11089616_11100222_11100346_11102663_11102787_11105219_11105601_11106564_11106688_11107391_11107515_11110651_11110772_11111513_11111640_11113277_11113450_11113534_11113763_11116093_11116213_11116858_11116999_11120091_11120234_11120369_11120523_11123173_11123345_11128007_11128086_11129512_11129671_11131280
transcript_68487.known	chr19	+	1049	11	FSM	ENSG00000183401.12	ENST00000458408.6	1049	11	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	5.5937465083788	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCGACTGTTAGTCTTGC	11346260	True	NA	6	True	AATAAA	-21	NA	11346518	11354944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11346628_11349653_11349688_11349937_11350027_11350117_11350200_11350807_11351004_11351905_11351974_11352056_11352134_11353450_11353573_11353791_11353875_11354579_11354697_11354872
transcript_6850.known	chr1	-	5658	13	FSM	ENSG00000118454.13	ENST00000370944.9	5658	13	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	17.0749979664876	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGCTGGTTCAGCATATTA	-70349696	True	NA	NA	False	AATAAA	-20	NA	70354722	70258998	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70324852_70324958_70336057_70336100_70353978
transcript_68501.known	chr19	-	4240	5	FSM	ENSG00000105514.8	ENST00000222120.8	4240	5	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	15.4333243340507	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTGTGCTTTTATTTC	-11331649	False	8008	-25	True	AAGAAA	-24	NA	11339657	11322067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11325586_11335446_11335572_11335664_11335784_11337171_11337461_11339468
transcript_68514.known	chr19	-	628	4	FSM	ENSG00000105518.14	ENST00000591677.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	286.462330275146	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCGCACCACAGCTGCCAT	-11338297	True	NA	NA	False	NA	NA	NA	11346305	11343063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346007
transcript_68516.known	chr19	-	677	4	FSM	ENSG00000105518.14	ENST00000586590.5	677	4	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	264.313366206773	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338260	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346207
transcript_68517.known	chr19	-	688	4	FSM	ENSG00000105518.14	ENST00000587948.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	294.473918860209	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	11346406	11342778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346333
transcript_68519.known	chr19	-	788	4	FSM	ENSG00000105518.14	ENST00000589555.5	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	285.991064351474	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGCTGCTGTCTTTTTTTT	-11338263	True	NA	-5	True	AATAAA	-14	NA	11346271	11342778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346207
transcript_68528.known	chr19	-	593	3	FSM	ENSG00000105518.14	ENST00000586218.5	593	3	0	0	0	0	multi-exon	TRUE	canonical	2	18	junction_2	299	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338202	True	NA	-2	True	AATAAA	-17	NA	11346210	11342775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11346126
transcript_68529.known	chr19	-	563	3	FSM	ENSG00000105518.14	ENST00000586701.1	563	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	308	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCCTGGAAATAAGGAG	-11338319	True	NA	-68	True	NA	NA	NA	11346327	11342841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11346207
transcript_68531.known	chr19	-	792	4	FSM	ENSG00000105518.14	ENST00000593256.6	792	4	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	116.878854660142	5084	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGTCTTTTTTTTTTC	-11338292	True	NA	-2	True	AATAAA	-17	NA	11346300	11342775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345629_11346126
transcript_68532.known	chr19	-	840	4	FSM	ENSG00000105518.14	ENST00000588560.5	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	231.799242640887	1730	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGAAATGGCTGCTGTCTT	-11338240	True	NA	-11	True	AATAAA	-8	NA	11346248	11342784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346126
transcript_68533.known	chr19	-	1003	4	FSM	ENSG00000105518.14	ENST00000586956.5	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	288.818666678977	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338277	True	NA	-4	True	AATAAA	-15	NA	11346285	11342777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519_11345738_11346007
transcript_68534.known	chr19	-	1310	2	FSM	ENSG00000105518.14	ENST00000588321.1	1310	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCTGCATGCTAATAAATG	-11338248	True	NA	-36	True	NA	NA	NA	11346256	11342809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343101_11345237
transcript_68535.known	chr19	-	1256	3	FSM	ENSG00000105518.14	ENST00000354882.10	1256	3	0	0	0	0	multi-exon	FALSE	canonical	3	616	junction_1	8.5	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTGCTGTCTTTTTTTTT	-11338260	True	NA	-4	True	AATAAA	-15	NA	11346268	11342777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11343121_11345251_11345416_11345519
transcript_68536.known	chr19	+	2727	10	FSM	ENSG00000105520.11	ENST00000251473.9	2727	10	0	0	0	0	multi-exon	TRUE	canonical	3	31	junction_8	7.76029781788188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCCATCTGCCTTCCT	11355127	False	NA	31	True	AATAAA	-44	NA	11355385	11365698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11355573_11356801_11356977_11357659_11357740_11359531_11359721_11359820_11359957_11361216_11361489_11362512_11362690_11363712_11363820_11364160_11364213_11364346
transcript_68538.nic	chr19	+	1772	4	ISM	ENSG00000105520.11	ENST00000251473.9	2727	10	7043	0	1163	0	3prime_fragment	FALSE	canonical	3	31	junction_2	8.99382504215469	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGGCCATCTGCCTTCCT	11362390	True	NA	31	True	AATAAA	-44	NA	11362428	11365698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_11362690_11363712_11363820_11364160_11364213_11364346
transcript_68547.known	chr19	-	682	3	FSM	ENSG00000267277.2	ENST00000590399.2	687	3	0	5	0	-5	multi-exon	FALSE	canonical	1	1	junction_1	1	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAACAGACGGGGGTCTCA	-11374555	False	434	NA	False	AATATA	-16	NA	11374935	11368122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11368296_11371687_11371872_11374610
transcript_68552.known	chr19	+	1662	2	FSM	ENSG00000173928.4	ENST00000312423.4	1662	2	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_1	0	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	11373451	True	NA	NA	False	NA	NA	NA	11374706	11376951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11374930_11375512
transcript_68553.known	chr19	-	2278	19	FSM	ENSG00000205517.13	ENST00000393423.7	2278	19	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_4	42.260837604829	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTAGAGGCCACTGTGCTG	-11417774	True	NA	NA	False	NA	NA	NA	11419328	11394324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11394521_11397243_11397359_11397444_11397598_11399854_11399970_11400039_11400109_11400201_11400298_11402010_11402133_11402214_11402248_11402454_11402542_11402649_11402707_11405146_11405232_11405322_11405427_11406418_11406635_11406721_11406865_11415936_11416149_11416613_11416668_11416835_11417060_11418670_11418785_11419245
transcript_68562.known	chr19	-	2411	8	FSM	ENSG00000187266.14	ENST00000222139.11	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_6	14.9516226680639	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATGTTCTAAGAAAGTAC	-11383934	True	NA	NA	False	AATAAA	-17	NA	11384314	11377206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11378596_11378690_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_68568.known	chr19	-	2086	7	FSM	ENSG00000187266.14	ENST00000592375.6	2086	7	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_5	15.8394724940223	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGTATGTTAAACAGCTC	-11383932	True	NA	-30	True	NA	NA	NA	11384312	11377624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11378779_11380883_11380972_11381055_11381210_11381691_11381850_11381929_11382106_11383096_11383233_11384092
transcript_68577.known	chr19	-	771	3	FSM	ENSG00000205517.13	ENST00000568420.1	771	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	12.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGGAGGCCGAGGCAGG	-11417751	True	NA	NA	False	NA	NA	NA	11419305	11416462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11417060_11418670_11418785_11419245
transcript_68579.nnic	chr19	-	585	3	NNC	ENSG00000205517.13	novel	557	4	NA	NA	-26	-185	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	13	106	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTACCAGGAGTC	-11418575	False	NA	NA	False	NA	NA	NA	11418599	11416223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_11416668_11417011_11417060_11418506
transcript_68581.nic	chr19	-	929	2	NIC	ENSG00000205517.13	novel	557	4	NA	NA	-26	-185	intron_retention	FALSE	canonical	3	45	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAGGTACCAGGAGTC	-11418575	False	NA	NA	False	NA	NA	NA	11418599	11416223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_11417060_11418506
transcript_68588.nic	chr19	+	2103	18	NIC	ENSG00000130175.10	novel	2096	18	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	485	junction_11	145.584373091968	1203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11435573	False	NA	18	True	AATAAA	-19	NA	11435606	11450968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_68589.known	chr19	+	2096	18	FSM	ENSG00000130175.10	ENST00000677123.1	2096	18	0	0	0	0	multi-exon	TRUE	canonical	3	261	junction_11	193.48377792037	806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11413586	True	NA	18	True	AATAAA	-19	NA	11435634	11450968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_68590.known	chr19	+	2063	18	FSM	ENSG00000130175.10	ENST00000591462.6	2063	18	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	213.590576234195	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTTGTCTGTGTCTGCCT	11413586	True	NA	15	True	AATAAA	-16	NA	11435634	11450965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11435707_11436040_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_68617.nnic	chr19	-	666	3	NNC	ENSG00000198003.12	novel	1943	11	NA	NA	13025	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_2	63	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11420794	True	NA	-8	True	AATAAA	-15	NA	11421874	11420604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_11420948_11421127_11421213_11421636
transcript_68618.nic	chr19	-	648	3	ISM	ENSG00000198003.12	ENST00000356392.9	2123	13	13225	0	13003	0	3prime_fragment	FALSE	canonical	3	109	junction_2	15.5	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGGTATTCATCTGTT	-11421872	False	NA	-8	True	AATAAA	-15	NA	11421896	11420604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11420948_11421127_11421213_11421676
transcript_68620.known	chr19	-	467	3	FSM	ENSG00000198003.12	ENST00000593281.1	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCTTGTATCTGGCATC	-11434878	False	NA	NA	False	ATTAAA	-14	NA	11434899	11430558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11430777_11430898_11431021_11434772
transcript_68621.known	chr19	+	1898	17	FSM	ENSG00000130175.10	ENST00000589838.5	1898	17	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_10	142.974853011815	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATACAATAAATGTGATCCCC	11436095	False	NA	-10	True	NA	NA	NA	11436117	11450940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11436197_11436388_11436506_11437875_11437972_11438066_11438125_11441239_11441358_11442385_11442516_11445388_11445474_11446271_11446351_11447073_11447161_11447438_11447598_11447692_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449429_11450645
transcript_68622.known	chr19	+	1613	8	FSM	ENSG00000130175.10	ENST00000586486.1	1613	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	440.260868864201	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGTGTCTGCCTCGC	11447433	True	NA	18	True	AATAAA	-19	NA	11447564	11450968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11447619_11447722_11447790_11448221_11448292_11448539_11448630_11448913_11448989_11449075_11449176_11449265_11449883_11450428
transcript_68626.nic	chr19	-	1574	7	FSM	ENSG00000130159.15	ENST00000585318.6	1510	7	-48	-16	-8	0	multi-exon	FALSE	canonical	3	40	junction_6	106.841003364813	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525943	True	NA	-12	True	AATAAA	-31	NA	11529180	11505928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11529061
transcript_6863.known	chr1	-	3327	12	FSM	ENSG00000118454.13	ENST00000262346.6	3327	12	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	57.5627577030511	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCTTCCATACTGATACAT	-70349708	True	NA	-16	True	AATAAA	-15	NA	70354734	70261236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70262848_70270855_70270957_70274719_70274819_70276764_70276845_70292387_70292550_70296129_70296262_70300763_70300909_70306223_70306291_70313744_70313791_70315480_70315567_70336057_70336100_70353978
transcript_68633.known	chr19	+	396	1	FSM	ENSG00000213303.3	ENST00000463278.1	396	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	54	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGACATAAATCTTTGGCTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	11523435	11523831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11523400_11523800
transcript_68634.known	chr19	-	1647	8	FSM	ENSG00000130159.15	ENST00000270517.12	1647	8	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	34.2755937443921	772	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525897	True	NA	-12	True	AATAAA	-31	NA	11529134	11505928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_68635.known	chr19	-	1501	7	FSM	ENSG00000130159.15	ENST00000252440.11	1501	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	111.038156604936	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525900	True	NA	-12	True	AATAAA	-31	NA	11529137	11505928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11513055_11513280_11513803_11514222_11519074_11519194_11529061
transcript_68636.known	chr19	-	818	5	FSM	ENSG00000130159.15	ENST00000588998.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	154.156373530257	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCAGTTTCCATTCTTGG	-11525859	True	NA	-12	True	AATAAA	-31	NA	11529096	11505928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507990_11508049_11519074_11519194_11529061
transcript_68637.known	chr19	-	970	6	FSM	ENSG00000130159.15	ENST00000417981.6	970	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	122.879778645634	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGAATCTGCAGGCGCCT	-11525935	True	NA	-85	True	NA	NA	NA	11529172	11506001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11506429_11507456_11507563_11507701_11507851_11507990_11508049_11519074_11519194_11529061
transcript_68638.known	chr19	+	1499	7	FSM	ENSG00000130176.8	ENST00000252456.7	1499	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	7.85281265959316	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGCCTCAGAGCTGCTC	11537888	True	NA	16	True	AATAAA	-16	NA	11538850	11550323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11538991_11541075_11541198_11546674_11546742_11546831_11546970_11547796_11547908_11549322_11549470_11549549
transcript_68642.known	chr19	-	585	5	FSM	ENSG00000130165.10	ENST00000590700.5	585	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	355.40425925979	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTAGTGGGTGTGCG	-11555318	True	NA	NA	False	NA	NA	NA	11559223	11553590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11554819_11554947_11559190
transcript_68648.known	chr19	-	743	4	FSM	ENSG00000130165.10	ENST00000589171.5	743	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	342.477574286097	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAACTGATCTCACTTGGC	-11555240	False	NA	NA	False	NA	NA	NA	11559145	11553456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553816_11554010_11554082_11554231_11554366_11558966
transcript_6865.known	chr1	+	689	5	FSM	ENSG00000197568.15	ENST00000525653.1	689	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.6421930087218	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAAAAGGGCCGGTTCCT	70353992	True	NA	NA	False	NA	NA	NA	70354854	70367723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355108_70366145_70366329_70366443_70366538_70366932_70366985_70367616
transcript_68651.known	chr19	-	1019	4	FSM	ENSG00000130165.10	ENST00000252445.7	1019	4	0	0	0	0	multi-exon	FALSE	canonical	3	558	junction_3	74.253320165199	5117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTGTCCGTGATGTCTT	-11555331	True	NA	-13	True	AATAAA	-18	NA	11559236	11553042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11553811_11554010_11554082_11554231_11554366_11559190
transcript_68654.known	chr19	-	1630	7	FSM	ENSG00000102575.13	ENST00000218758.9	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	12.0508183216835	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578335	True	NA	0	True	AATAAA	-22	NA	11578985	11574659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584_11578658_11578843
transcript_68655.nic	chr19	-	1758	6	ISM	ENSG00000102575.13	ENST00000218758.9	1630	7	58	0	-4	0	intron_retention	FALSE	canonical	3	13	junction_5	10.1074230147946	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTGCCACTGGTGTGTTA	-11578277	False	NA	0	True	AATAAA	-22	NA	11578927	11574659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578584
transcript_68656.known	chr19	-	1527	6	FSM	ENSG00000102575.13	ENST00000412435.6	1527	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	11.1247471881387	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTCAATAAAAGAATAGTTG	-11578336	True	NA	-31	True	NA	NA	NA	11578986	11574690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11575253_11576242_11576589_11576715_11576844_11577056_11577318_11577592_11577680_11578843
transcript_68658.known	chr19	+	591	5	FSM	ENSG00000198551.10	ENST00000587939.5	591	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	26.7149302825218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAACAAGAAAACTCCTGG	11594986	True	NA	NA	False	AAGAAA	-27	NA	11597461	11616773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11597631_11604209_11604365_11614526_11614654_11614826_11614888_11616694
transcript_6866.nic	chr1	+	1570	4	FSM	ENSG00000197568.15	ENST00000689607.1	868	4	-698	-4	-691	0	multi-exon	FALSE	canonical	2	14	junction_2	11.2249721603218	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	NA	False	NA	17	True	ATTAAA	-22	NA	70354094	70368023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355112_70366443_70366538_70366932_70366985_70367616
transcript_68661.known	chr19	+	2803	4	FSM	ENSG00000198551.10	ENST00000361113.10	2803	4	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	6.18241233033047	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGGTGCTCAGAAGAATTT	11595007	True	NA	39	True	CATAAA	-23	NA	11597482	11619161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11597631_11614526_11614654_11614826_11614888_11616694
transcript_68663.nnic	chr19	+	534	3	NNC	ENSG00000198551.10	novel	2755	4	NA	NA	-11	-5818	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAGATTTCTGTTTCCTTG	11594975	True	NA	NA	False	AATAAA	-15	NA	11597450	11598460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11597631_11597971_11598104_11598238
transcript_68664.nnic	chr19	+	376	2	NNC	ENSG00000198551.10	novel	2755	4	NA	NA	-33	-5237	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGGTTGGGGTTCCCC	11594953	True	NA	NA	False	AATAAA	-18	NA	11597428	11599041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11597631_11598867
transcript_6867.known	chr1	+	832	4	FSM	ENSG00000197568.15	ENST00000463058.6	863	4	31	0	-15	0	multi-exon	FALSE	canonical	2	14	junction_2	6.16441400296898	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353966	True	NA	17	True	ATTAAA	-22	NA	70354828	70368023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355108_70366443_70366538_70366932_70366985_70367616
transcript_68679.nnic	chr19	-	483	2	Antisense	novelGene_ENSG00000267343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	45	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCCCCTTCCCATACAAAT	-11694369	True	NA	NA	False	AATAAA	-22	NA	11695001	11676258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_11676539_11694798
transcript_6868.nic	chr1	+	1100	4	FSM	ENSG00000197568.15	ENST00000486110.2	1095	4	-5	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	43.8710230866191	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353930	True	NA	17	True	ATTAAA	-22	NA	70354792	70368023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355209_70366145_70366329_70366443_70366538_70367616
transcript_68681.nnic	chr19	-	1514	2	Antisense	novelGene_ENSG00000267343.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCCCCCTTCCCATACAA	-11694363	True	NA	NA	False	AATAAA	-20	NA	11694995	11676260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_11677578_11694798
transcript_68683.known	chr19	+	923	5	FSM	ENSG00000197332.9	ENST00000666937.1	923	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.9180788932265	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTTTTCTATTCTTTCA	11639111	True	NA	NA	False	ACTAAA	-45	NA	11639753	11678494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11639897_11648357_11648485_11650356_11650418_11651652_11652054_11678303
transcript_68686.known	chr19	-	2396	4	FSM	ENSG00000197933.13	ENST00000341191.11	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	1.69967317119759	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCTTTTGTTTTGTG	-11738506	True	NA	-3	True	ATTAAA	-18	NA	11738946	11721264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_11723343_11724193_11724255_11725200_11725328_11738816
transcript_68688.known	chr19	+	512	3	FSM	ENSG00000177599.13	ENST00000492230.1	512	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGCTGTATAATACTTTT	11798434	True	NA	NA	False	TATAAA	-16	NA	11798587	11809622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11798728_11804541_11804668_11809376
transcript_68689.known	chr19	+	2888	3	FSM	ENSG00000177599.13	ENST00000323169.10	2888	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTATACTGTTACCAAATTA	11798369	True	NA	NA	False	ATTAAA	-31	NA	11798522	11808503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11798728_11804541_11804668_11805946
transcript_68690.known	chr19	+	920	4	FSM	ENSG00000171295.13	ENST00000427505.5	920	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.0184900284226	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTATCGTAGACATGAAAG	11813331	False	NA	NA	False	NA	NA	NA	11814343	11831983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11814451_11830273_11830410_11830616_11830678_11831367
transcript_68692.known	chr19	+	2574	4	FSM	ENSG00000171291.9	ENST00000682736.1	2574	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	5.09901951359278	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTATAATGTTACATTGTT	11848180	True	NA	NA	False	AATAAA	-30	NA	11848725	11869486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11848931_11866204_11866332_11866536_11866598_11867305
transcript_68693.known	chr19	+	2408	3	FSM	ENSG00000171291.9	ENST00000455282.1	2408	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAAGCTTATAATGTTACAT	11848215	True	NA	NA	False	AATAAA	-26	NA	11848760	11869482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11848931_11866536_11866598_11867305
transcript_68695.known	chr19	+	1438	5	FSM	ENSG00000198429.10	ENST00000340180.5	1438	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	10.917302780449	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTGGACTTGTGGTGAG	11885090	True	NA	NA	False	NA	NA	NA	11887854	11914329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648_11904888_11913408
transcript_68696.known	chr19	+	2441	4	FSM	ENSG00000198429.10	ENST00000429654.7	2441	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	2.05480466765633	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAGATAAAACCACAAAGAT	11885017	True	NA	NA	False	NA	NA	NA	11887781	11906696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11887987_11903572_11903700_11903904_11903966_11904648
transcript_68698.known	chr19	+	569	4	FSM	ENSG00000198429.10	ENST00000445911.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	10.8012344973464	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAAAAGCCTTCAGATAT	11885053	True	NA	NA	False	NA	NA	NA	11887817	11904902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11887987_11903614_11903700_11903904_11903966_11904648
transcript_6870.nnic	chr1	+	1000	4	NIC	ENSG00000197568.15	novel	1095	4	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	43.622114676949	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353933	True	NA	17	True	ATTAAA	-22	NA	70354795	70368023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_70355112_70366145_70366329_70366443_70366538_70367616
transcript_68700.known	chr19	+	2843	4	FSM	ENSG00000196757.8	ENST00000254321.10	2843	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	8.17856276425687	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAAGCTTATAATGTTAC	11924053	True	NA	23	True	AATAAA	-25	NA	11925106	11950763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11925274_11947180_11947308_11947513_11947575_11948275
transcript_68701.known	chr19	+	2862	4	FSM	ENSG00000197054.12	ENST00000358987.8	2862	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	1.24721912892465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTCTAAATACAGCCTTTT	11964803	True	NA	NA	False	AATAAA	-19	NA	11965039	11980617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11965212_11977037_11977165_11977370_11977432_11978115
transcript_68703.known	chr19	+	2621	4	FSM	ENSG00000197054.12	ENST00000343949.9	2621	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	11964817	True	NA	NA	False	NA	NA	NA	11965053	11980381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11965212_11977028_11977165_11977370_11977432_11978115
transcript_68717.known	chr19	-	2338	5	FSM	ENSG00000197647.13	ENST00000419886.7	2338	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.12414379544733	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-12035439	True	NA	-4	True	AATAAA	-29	NA	12035688	12014715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12034827_12034875_12035536
transcript_6872.known	chr1	+	802	3	FSM	ENSG00000197568.15	ENST00000370940.7	815	3	13	0	-1	0	multi-exon	FALSE	canonical	3	41	junction_1	28	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353948	True	NA	17	True	ATTAAA	-22	NA	70354810	70368023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355112_70366443_70366538_70367616
transcript_68728.known	chr19	+	523	4	FSM	ENSG00000219665.8	ENST00000589551.1	523	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	52.332271751441	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAGGAGAATCGCTTGAAC	11985594	True	NA	NA	False	NA	NA	NA	11987766	12003595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_11990168_11990382_12001773_12001823_12003391
transcript_68729.nnic	chr19	+	811	4	NNC	ENSG00000219665.8	novel	622	3	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	50.4667107001129	70	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985436	True	NA	4	True	AATAAA	-20	NA	11987608	12003811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_11987824_12001129_12001257_12001773_12001823_12003391
transcript_68735.known	chr19	+	6588	4	FSM	ENSG00000223547.10	ENST00000439326.8	6588	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.942809041582063	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTGCCAAGTTATTGG	12063200	True	NA	11	True	ATTAAA	-22	NA	12064730	12081565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12064877_12074030_12074158_12074360_12074422_12075311
transcript_68736.known	chr19	+	1994	4	FSM	ENSG00000214189.9	ENST00000430298.7	1994	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	33.9411254969543	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGAATGTAAACAGTGT	12088274	False	NA	NA	False	NA	NA	NA	12092467	12113048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12110304_12110432_12110633_12110695_12111245
transcript_68737.known	chr19	-	2282	4	FSM	ENSG00000197647.13	ENST00000550507.7	2283	4	0	1	0	0	multi-exon	FALSE	canonical	1	1	junction_3	8.80656320908194	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGCAGTTGAGAAATCCGT	-12035430	True	NA	-4	True	AATAAA	-29	NA	12035679	12014715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12016667_12017875_12017937_12018165_12018293_12035536
transcript_6874.known	chr1	+	692	3	FSM	ENSG00000197568.15	ENST00000361764.9	823	3	19	112	7	-108	multi-exon	FALSE	canonical	3	29	junction_1	34	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACCTACCCAAATCCTATAAA	70353942	True	NA	-95	True	NA	NA	NA	70354804	70367911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355108_70366443_70366538_70367616
transcript_68742.known	chr19	-	642	4	FSM	ENSG00000132010.16	ENST00000418866.1	642	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	8.17856276425687	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAGAATGTACAGAAACCT	-12139154	True	NA	NA	False	GATAAA	-30	NA	12140315	12133667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12140179
transcript_68743.known	chr19	-	3004	4	FSM	ENSG00000132010.16	ENST00000334213.10	3004	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	9.03081145609604	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGGTATGTTTGCAATT	-12139189	True	NA	NA	False	ATTAAA	-31	NA	12140350	12131349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179
transcript_68745.nnic	chr19	-	1055	4	NIC	ENSG00000257591.6	novel	695	4	NA	NA	-41	0	intron_retention	FALSE	canonical	3	19	junction_1	11.8602979164381	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTTTCTTTTAGATTA	-12154216	True	NA	-6	True	AATAAA	-15	NA	12156775	12142089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12142737_12147394_12147456_12147675_12147803_12156555
transcript_6875.known	chr1	+	898	3	FSM	ENSG00000197568.15	ENST00000359875.9	898	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	42	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	70353949	True	NA	17	True	ATTAAA	-22	NA	70354811	70368023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70355209_70366443_70366538_70367616
transcript_68755.known	chr19	+	546	3	FSM	ENSG00000214189.9	ENST00000601686.1	546	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGTTGCAGTGAGCTGAGAG	12088113	True	NA	NA	False	NA	NA	NA	12092306	12137235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12135774_12135928_12137006
transcript_68760.known	chr19	+	622	3	FSM	ENSG00000219665.8	ENST00000489336.5	622	3	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_2	1.5	1090	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTTTCAGGCTCTTTA	11985498	True	NA	4	True	AATAAA	-20	NA	11987670	12003811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12003391
transcript_68761.known	chr19	+	1257	3	FSM	ENSG00000219665.8	ENST00000406892.6	1257	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGAGGCTCTGTGATTTCA	11985444	True	NA	NA	False	ATTAAA	-15	NA	11987616	12027194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12026193
transcript_68762.known	chr19	+	607	4	FSM	ENSG00000219665.8	ENST00000476474.5	607	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	57.28874234961	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTGTTTCTTATGCTTGC	11985506	True	NA	12	True	AATAAA	-14	NA	11987678	12046275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12035553_12035773_12046081
transcript_68763.known	chr19	-	1756	4	FSM	ENSG00000257446.4	ENST00000547628.2	1756	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	2.16024689946929	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTCTATGGATGTAAGCA	-12051768	True	NA	NA	False	NA	NA	NA	12052961	12043804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12045210_12046367_12046429_12046633_12046761_12052798
transcript_68764.known	chr19	-	2651	8	FSM	ENSG00000213297.8	ENST00000430024.5	2651	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	18.1377945692616	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATACTCACTGATGCCCAA	-12154172	True	NA	-12	True	AATAAA	-16	NA	12156731	12132116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135905_12140179_12140326_12142640_12142716_12147394_12147456_12147675_12147803_12156555
transcript_68765.known	chr19	+	516	3	FSM	ENSG00000219665.8	ENST00000495324.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	61.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACTGAACCATGTGGTAAAG	11985483	True	NA	NA	False	CATAAA	-17	NA	11987655	12018470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_11987824_12001773_12001823_12018171
transcript_68766.known	chr19	+	566	2	FSM	ENSG00000214189.9	ENST00000596096.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACACGTTTAAGGAAGAG	12088069	True	NA	NA	False	AATAAA	-38	NA	12092262	12098214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12092471_12097856
transcript_68767.known	chr19	-	669	5	FSM	ENSG00000132010.16	ENST00000454949.5	669	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.9714496712767	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTATGATGGTAAAGAATGT	-12139165	True	NA	NA	False	GATAAA	-20	NA	12140326	12133677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12133986_12135499_12135561_12135768_12135896_12136850_12136877_12140179
transcript_68768.known	chr19	+	3601	4	FSM	ENSG00000196646.12	ENST00000343979.6	3601	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1.4142135623731	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCCTTTCATGGATTGTG	12162250	True	NA	2	True	AATAAA	-14	NA	12163095	12189871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12163207_12185784_12185912_12186113_12186175_12186569
transcript_6877.known	chr1	-	575	2	FSM	ENSG00000226088.1	ENST00000413943.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCATACCTATTAAGATA	NA	False	NA	NA	False	ATTAAA	-17	NA	70360437	70359561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_70359996_70360296
transcript_68771.nnic	chr19	-	702	5	NNC	ENSG00000197857.15	novel	2780	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_3	12.7867118525444	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	NA	False	NA	-1	True	ATTAAA	-21	NA	12294891	12271807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_12271978_12274972_12275034_12275955_12276083_12293231_12293376_12294691
transcript_68772.known	chr19	-	2780	5	FSM	ENSG00000197857.15	ENST00000356109.10	2780	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	13.9171656597168	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	-12294112	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12293231_12293376_12294691
transcript_68776.nnic	chr19	-	571	4	NNC	ENSG00000197857.15	novel	2636	4	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	11.0252236056942	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	NA	False	NA	-1	True	ATTAAA	-21	NA	12294904	12271807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_12271978_12274972_12275034_12275955_12276083_12294691
transcript_68777.known	chr19	-	2636	4	FSM	ENSG00000197857.15	ENST00000355684.6	2636	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	5.73488351136175	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGTACATAGTTGTATT	-12294112	True	NA	-1	True	ATTAAA	-21	NA	12294883	12271807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12274064_12274972_12275034_12275955_12276083_12294691
transcript_68780.known	chr19	+	917	3	FSM	ENSG00000234773.8	ENST00000426044.1	917	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCCACCCCCCCGCCCAGG	12194205	True	NA	NA	False	NA	NA	NA	12195016	12237767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12195144_12234712_12234825_12237089
transcript_68783.known	chr19	+	2042	3	FSM	ENSG00000234773.8	ENST00000415793.7	2102	3	0	60	0	-60	multi-exon	FALSE	canonical	1	1	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTCAGCACCCATTTATTT	12194203	True	NA	-50	True	NA	NA	NA	12195014	12209806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12195144_12207331_12207709_12208270
transcript_68785.known	chr19	-	556	3	FSM	ENSG00000197857.15	ENST00000483826.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTTCCCTCCTGTAAAC	-12294109	True	NA	NA	False	TATAAA	-18	NA	12294880	12291027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12291251_12293231_12293376_12294691
transcript_68790.known	chr19	+	412	1	FSM	ENSG00000213293.4	ENST00000461223.1	412	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	215	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCCTGCCCCCAAAGCAA	NA	False	NA	NA	False	NA	NA	NA	12260125	12260537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12260100_12260500
transcript_68794.nic	chr19	-	1473	5	NIC	ENSG00000188868.14	novel	958	5	NA	NA	-7	668	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	8.44097150806707	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAATGTGGGAAAGCCTT	-12333059	True	NA	NA	False	AATAAA	-27	NA	12333727	12318510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12319312_12319429_12319666_12321271_12321333_12322584_12322712_12333479
transcript_68795.known	chr19	-	958	5	FSM	ENSG00000188868.14	ENST00000595977.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	6.44204936336256	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATATACATGTAAACAGTGT	-12333052	True	NA	NA	False	NA	NA	NA	12333720	12319186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12319312_12319429_12319834_12321271_12321333_12322584_12322712_12333479
transcript_68797.known	chr19	-	2699	4	FSM	ENSG00000188868.14	ENST00000293725.10	2699	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	3.29983164553722	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GGAAAGAAAGAAAAGACATA	-12332965	True	NA	NA	False	AAAACA	-33	NA	12333633	12317476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12319834_12321271_12321333_12322584_12322712_12333479
transcript_68800.nnic	chr19	-	1704	3	NIC	ENSG00000188868.14	novel	2699	4	NA	NA	-7	674	intron_retention	FALSE	canonical	1	1	junction_1	10	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGAAAGCCTTTCATAA	-12333059	True	NA	NA	False	AATAAA	-33	NA	12333727	12318504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12319834_12322584_12322712_12333479
transcript_68803.nic	chr19	-	2283	4	NIC	ENSG00000198342.10	novel	6274	6	NA	NA	0	208	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	6.12825877028341	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATGTGTTGTAAAAGCT	-12365301	True	NA	-24	True	AATAAA	-19	NA	12365683	12349374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12351319_12352009_12352071_12352987_12353115_12365532
transcript_68804.known	chr19	-	1906	3	FSM	ENSG00000198342.10	ENST00000438182.5	1906	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTATCCCCTAACCATATG	-12365259	True	NA	NA	False	NA	NA	NA	12365641	12349582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12351319_12352009_12352071_12365532
transcript_68805.known	chr19	+	704	5	FSM	ENSG00000173875.14	ENST00000598225.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.3513202428783	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGAGTCACACTGGAGAAAA	12607495	True	NA	NA	False	NA	NA	NA	12610919	12627982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12611083_12612225_12612317_12623699_12623827_12624649_12624711_12627720
transcript_68808.known	chr19	-	6108	5	FSM	ENSG00000188033.10	ENST00000311437.11	6108	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	1.6393596310755	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATTGAGTTTTTCAT	-12610052	True	NA	-1	True	ATTAAA	-23	NA	12610813	12576099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12581725_12582849_12582911_12583429_12583557_12609157_12609203_12610563
transcript_6881.known	chr1	+	466	1	FSM	ENSG00000271992.1	ENST00000607679.1	466	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTCGTGGTTTAGATTT	NA	False	NA	5	True	AATAAA	-15	NA	70445070	70445536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_70445100_70445500
transcript_68810.known	chr19	-	2583	4	FSM	ENSG00000196466.10	ENST00000430385.3	2583	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.28653526310404	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTGCTTTTGTTTAATG	-12400556	True	NA	-1	True	ATTAAA	-22	NA	12401271	12390015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12392207_12392602_12392664_12393296_12393424_12401067
transcript_68811.known	chr19	-	2573	4	FSM	ENSG00000180855.16	ENST00000301547.10	2573	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	2.05480466765633	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATTTCTTCTGTTTAATG	-12440422	True	NA	-1	True	ATTAAA	-22	NA	12441021	12429705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12431981_12432376_12432438_12433070_12433198_12440911
transcript_68812.known	chr19	-	4897	4	FSM	ENSG00000242852.7	ENST00000397732.8	4897	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	1.88561808316413	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTTCAGATTAAGTTTTT	-12484312	True	NA	NA	False	ATTAAA	-20	NA	12484816	12461183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12465734_12466461_12466520_12466723_12466851_12484654
transcript_68815.known	chr19	-	255	2	FSM	ENSG00000249709.8	ENST00000416136.1	255	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGAGGTCTCTATTGTCTG	-12549576	True	NA	NA	False	ATTAAA	-36	NA	12551434	12548712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12548863_12551329
transcript_68816.known	chr19	+	294	2	FSM	ENSG00000173875.14	ENST00000498389.1	294	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGCTTCCTTCCTTTA	12607533	True	NA	-1	True	NA	NA	NA	12610957	12612394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12611083_12612225
transcript_68817.known	chr19	-	2885	4	FSM	ENSG00000249709.8	ENST00000339282.12	2885	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	4.49691252107735	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATCAGCATTTCCATTTCT	-12549624	True	NA	-14	True	ATTAAA	-17	NA	12551482	12525372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12551329
transcript_68818.known	chr19	-	575	5	FSM	ENSG00000249709.8	ENST00000427105.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.2223315833402	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTCAGATTCTCAATCTT	-12549609	True	NA	NA	False	AGTAAA	-26	NA	12551467	12527857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12527917_12528303_12528365_12528569_12528697_12550462_12550653_12551329
transcript_68819.known	chr19	-	3185	24	FSM	ENSG00000104774.13	ENST00000456935.7	3185	24	0	0	0	0	multi-exon	TRUE	canonical	3	110	junction_17	17.9150484314851	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCGCTCTGTGACTGAGTG	-12645777	False	20965	-19	True	ATTAAA	-20	NA	12666742	12646511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12646733_12647232_12647336_12647442_12647599_12648174_12648403_12649135_12649217_12649340_12649429_12649912_12650015_12650103_12650223_12652152_12652271_12652362_12652461_12655693_12655880_12656570_12656688_12656948_12657057_12657445_12657556_12658062_12658142_12658223_12658345_12658427_12658511_12661259_12661377_12663316_12663463_12663702_12663836_12664791_12664986_12665351_12665526_12665702_12665806_12666542
transcript_68825.known	chr19	+	1425	11	FSM	ENSG00000123154.12	ENST00000548381.5	1425	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	59.5957213229272	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCAGTCCTCGTTCT	12666006	True	NA	21	True	AATAAA	-33	NA	12666813	12675831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12669894_12669976_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_68832.known	chr19	+	1480	10	FSM	ENSG00000123154.12	ENST00000546754.5	1480	10	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	60.7510605506166	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAATAAATAGAAGAGGGGG	12665994	True	NA	-19	True	AAAAAG	-25	NA	12666801	12675791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12666993_12668507_12668628_12669754_12670081_12670179_12670286_12670562_12670612_12670694_12670822_12672846_12672915_12673007_12673117_12673201_12673317_12675522
transcript_68838.known	chr19	-	1172	9	FSM	ENSG00000095059.17	ENST00000594424.5	1172	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_8	141.151016202506	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAGATGGTATCTGAAGTC	-12674209	False	NA	-28	True	NA	NA	NA	12681206	12675742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681032
transcript_6885.known	chr1	-	2821	11	FSM	ENSG00000132485.14	ENST00000254821.10	2821	11	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	202.331015912044	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAGTGGTGTTTGTTAGAA	-71063466	True	NA	-13	True	AATAAA	-17	NA	71081011	71063336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_71065138_71065677_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_68858.known	chr19	-	554	3	FSM	ENSG00000104774.13	ENST00000493218.5	554	3	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_2	3	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTCGCTCTGTGACTGAGT	-12647601	False	NA	-20	True	ATTAAA	-19	NA	12647673	12646512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12646733_12647232_12647336_12647442
transcript_68862.known	chr19	-	645	1	FSM	ENSG00000178464.6	ENST00000325000.4	645	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2976	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCTTCCAATGTGCTGCCC	-12643825	False	NA	-57	True	NA	NA	NA	12643919	12643274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12643300_12643900
transcript_68863.known	chr19	-	574	2	FSM	ENSG00000104774.13	ENST00000469423.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCGCTCTGTGACTGAGTGT	-12647490	True	NA	-18	True	ATTAAA	-21	NA	12647584	12646510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12646733_12647232
transcript_68864.known	chr19	-	599	4	FSM	ENSG00000105583.11	ENST00000222190.9	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	890.462177124267	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGTCAGCCTCTTCTGT	-12648438	True	NA	-22	True	AATAAA	-12	NA	12669403	12668074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12668426_12668519_12668612_12669127_12669234_12669353
transcript_68865.known	chr19	-	1345	9	FSM	ENSG00000095059.17	ENST00000210060.12	1345	9	0	0	0	0	multi-exon	FALSE	canonical	3	337	junction_2	53.1458782503404	2644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12674883	True	NA	-2	True	NA	NA	NA	12681880	12675716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677107_12677212_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_68866.known	chr19	-	1090	8	FSM	ENSG00000095059.17	ENST00000351660.9	1090	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	140.397249813171	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	-12674774	False	NA	-7	True	NA	NA	NA	12681771	12675721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676106_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_68867.known	chr19	-	1176	8	FSM	ENSG00000095059.17	ENST00000601537.5	1176	8	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	138.044358443071	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGCTACGTCTCTAGAA	-12674863	True	NA	-47	True	NA	NA	NA	12681860	12675761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676143_12677290_12677397_12679456_12679544_12679622_12679720_12679800_12679923_12680160_12680326_12681559
transcript_68868.known	chr19	-	553	5	FSM	ENSG00000095059.17	ENST00000598246.5	553	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	189.910505238652	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTGTCTCGGTCCTTG	-12672523	False	NA	-2	True	NA	NA	NA	12679520	12675716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676079_12677107_12677212_12677290_12677397_12679456
transcript_68869.known	chr19	-	627	3	FSM	ENSG00000105583.11	ENST00000598732.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	1669	junction_2	86	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTCCATGTTTCTAGGGG	-12648436	True	NA	-92	True	NA	NA	NA	12669401	12668144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12668618_12669127_12669234_12669353
transcript_68870.known	chr19	-	464	4	FSM	ENSG00000095059.17	ENST00000600864.5	464	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	212.512483293466	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCATGTCTGTGTCTCGGT	-12672543	False	NA	-7	True	NA	NA	NA	12679540	12675721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12675934_12676016_12676079_12677290_12677397_12679456
transcript_68872.known	chr19	-	1727	10	FSM	ENSG00000132004.13	ENST00000393261.8	1727	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_6	12.6178396147363	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	-12695791	True	NA	-5	True	AATAAA	-22	NA	12696631	12688915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12694798_12694939_12696172
transcript_68875.nic	chr19	-	1576	9	NIC	ENSG00000132004.13	novel	1727	10	NA	NA	-1	0	intron_retention	FALSE	canonical	2	10	junction_8	42.5600678453407	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTGTGAGTGTGGTT	-12695780	True	NA	-5	True	AATAAA	-22	NA	12696620	12688915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_12689291_12689371_12689438_12689540_12689631_12689760_12689875_12689961_12690111_12691165_12691258_12691341_12691455_12694593_12694723_12696172
transcript_68884.known	chr19	-	879	3	FSM	ENSG00000123144.11	ENST00000242784.5	879	3	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_2	471	2777	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTGCTTGGTTTGTCT	-12712730	True	NA	-1	True	AGTAAA	-21	NA	12734684	12730639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12731069_12731343_12731422_12734312
transcript_68888.known	chr19	+	1368	8	FSM	ENSG00000198356.12	ENST00000591090.5	1368	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	520.952424479845	7175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	12737104	True	NA	15	True	AATAAA	-16	NA	12737138	12748323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12737194_12737458_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_6890.known	chr1	-	2816	10	FSM	ENSG00000132485.14	ENST00000370920.8	2816	10	0	0	0	0	multi-exon	TRUE	canonical	3	427	junction_1	180.313923786021	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAATGTTCATTTTTAAAC	-71063490	True	NA	-1	True	AATAAA	-22	NA	71081035	71063290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_71065138_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_68900.known	chr19	+	1275	7	FSM	ENSG00000198356.12	ENST00000357332.8	1275	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	431.50617994802	6193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTGACATTGGGAG	12727146	True	NA	15	True	AATAAA	-16	NA	12737496	12748323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12737667_12738510_12738659_12745376_12745526_12745608_12745760_12747196_12747305_12747394_12747593_12747972
transcript_68902.nic	chr19	-	1238	8	ISM	ENSG00000095066.12	ENST00000264827.9	2603	22	9202	-1	105	0	3prime_fragment	FALSE	canonical	3	323	junction_6	43.1721754686265	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGCTGTGCTCTGGGCAC	-12759408	False	NA	-33	True	AATAAA	-15	NA	12766418	12763002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_12763432_12763527_12763600_12763667_12763779_12764813_12764918_12764998_12765082_12765689_12765725_12765926_12766015_12766102
transcript_68905.known	chr19	-	403	3	FSM	ENSG00000095066.12	ENST00000592512.1	403	3	0	0	0	0	multi-exon	FALSE	canonical	2	37	junction_2	236.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTATGGAGTACTCACCCT	-12778354	False	NA	NA	False	NA	NA	NA	12778409	12774534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774742_12774811_12774898_12778299
transcript_68906.nnic	chr19	-	823	3	NNC	ENSG00000095066.12	novel	890	3	NA	NA	465	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	241.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-12775003	False	NA	NA	False	AAAAAG	-29	NA	12775058	12774077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_12774742_12774811_12774898_12774985
transcript_68910.known	chr19	-	594	3	FSM	ENSG00000095066.12	ENST00000591641.5	594	3	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	245.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGAGTTCAAGACCAGCC	-12778391	True	NA	NA	False	NA	NA	NA	12778446	12774335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774742_12774811_12774898_12778344
transcript_68912.known	chr19	-	890	3	FSM	ENSG00000095066.12	ENST00000589134.5	890	3	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_1	10.5	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGCCAGTAGTTCTGTGA	-12768534	True	NA	NA	False	AAAAAG	-29	NA	12775544	12774077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12774742_12774811_12774898_12775404
transcript_68921.known	chr19	-	925	6	FSM	ENSG00000167815.12	ENST00000301522.3	925	6	0	0	0	0	multi-exon	FALSE	canonical	3	7636	junction_5	469.592589379347	16248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	-12745587	True	NA	-10	True	AATAAA	-17	NA	12801800	12796822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12797167_12799858_12799990_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_68922.known	chr19	+	296	2	FSM	ENSG00000267062.1	ENST00000585496.1	296	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	140	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCACGGCGCGGGGGAGGG	12796780	False	NA	NA	False	NA	NA	NA	12796822	12801849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12797023_12801753
transcript_68923.known	chr19	-	784	5	FSM	ENSG00000167815.12	ENST00000334482.9	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	3406.95160664193	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTGTTGGTGTGCTCTG	-12745574	True	NA	-7	True	AATAAA	-20	NA	12801787	12796819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12797167_12800176_12800300_12800915_12801070_12801158_12801271_12801739
transcript_68924.known	chr19	-	1717	4	FSM	ENSG00000167815.12	ENST00000466174.5	1717	4	0	0	0	0	multi-exon	FALSE	canonical	3	7636	junction_3	388.185808888246	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTCTGTGTTGGTGTGCT	-12745576	True	NA	-10	True	AATAAA	-17	NA	12801789	12796822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12797167_12799858_12801070_12801158_12801271_12801739
transcript_68933.known	chr19	+	1164	8	FSM	ENSG00000104889.7	ENST00000221486.6	1164	8	0	0	0	0	multi-exon	TRUE	canonical	3	827	junction_3	67.5398597352795	4519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTGGTTTGATTTTT	12793372	True	NA	17	True	AATAGA	-20	NA	12806583	12813640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_68934.known	chr19	+	878	4	FSM	ENSG00000104889.7	ENST00000590121.2	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_3	86.6833317310773	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCACGGCTGTAA	12793465	True	NA	NA	False	AATAAA	-35	NA	12806676	12807976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12806801_12807007_12807080_12807205_12807330_12807418
transcript_68935.known	chr19	+	1245	6	FSM	ENSG00000104889.7	ENST00000593017.2	1245	6	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	44.6569143582492	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACCACACGTAGGGGATGT	12793472	False	NA	8	True	ATTAAA	-13	NA	12806683	12813525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12807080_12807205_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_68936.known	chr19	+	916	7	FSM	ENSG00000104889.7	ENST00000643757.1	916	7	0	0	0	0	multi-exon	FALSE	canonical	3	827	junction_2	63.4315028637629	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAGCAACCAGCCTCTAGC	12806828	False	NA	-70	True	NA	NA	NA	12806845	12813447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12807080_12807205_12807330_12807418_12807507_12810070_12810209_12810316_12810405_12813082_12813207_12813327
transcript_68938.known	chr19	+	1496	13	FSM	ENSG00000105613.10	ENST00000591495.5	1496	13	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_2	15.4371485565034	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCAGTCATTGATTTG	12833489	True	NA	-42	True	NA	NA	NA	12833950	12858864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12834007_12838268_12838301_12840445_12840535_12840990_12841067_12843528_12843608_12847289_12847451_12847611_12847688_12847847_12848058_12851933_12852036_12852114_12852248_12852327_12852396_12858361_12858442_12858530
transcript_68943.known	chr19	-	1328	7	FSM	ENSG00000132026.15	ENST00000322912.9	1328	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	6.42261628933256	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGACGAGTGTGGCTGCTT	-12835332	False	NA	-4	True	AATAAA	-17	NA	12835416	12825481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12834784_12834847_12835082
transcript_68945.known	chr19	-	641	6	FSM	ENSG00000132026.15	ENST00000589808.5	641	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	6.11882341631134	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGCGGTACCTCGTCCCAGA	-12830591	False	NA	NA	False	NA	NA	NA	12830675	12825836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829998_12830611
transcript_68946.known	chr19	-	620	6	FSM	ENSG00000132026.15	ENST00000590404.6	620	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	6.82348884369279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCCGCGGTACCTCGTC	-12834464	False	NA	NA	False	NA	NA	NA	12834548	12825841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12825934_12826774_12826872_12828656_12828768_12828868_12828954_12829810_12829986_12834488
transcript_68950.known	chr19	+	739	3	FSM	ENSG00000267424.1	ENST00000588469.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	10	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACATGGAGGAGCGGCGA	NA	False	NA	-83	True	NA	NA	NA	12825710	12832983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12825913_12826784_12826893_12832554
transcript_68953.nnic	chr19	+	724	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	272	94	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	3	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCTCCTTAATCCTGA	12825864	False	NA	11	True	TATAAA	-14	NA	12825982	12833077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_68954.nnic	chr19	+	849	3	NNC	ENSG00000267424.1	novel	739	3	NA	NA	272	219	at_least_one_novel_splicesite	FALSE	canonical	2	23	junction_1	3	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTGCGTCTCCTGTGAAGA	12825864	False	NA	NA	False	NA	NA	NA	12825982	12833202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_12826076_12826784_12826893_12832554
transcript_68955.known	chr19	-	1938	6	FSM	ENSG00000105612.9	ENST00000222219.8	1938	6	0	0	0	0	multi-exon	TRUE	canonical	3	176	junction_2	21.5925913220252	403	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCTGTTAACCTTCTCT	-12877000	True	NA	-4	True	AATAAA	-15	NA	12881449	12875208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12876364_12878381_12878580_12878669_12878835_12880801_12880881_12880971_12881153_12881289
transcript_68956.known	chr19	-	745	5	FSM	ENSG00000105612.9	ENST00000592506.1	745	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	87.4224656481388	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGAATGTGAACCAGATAGC	-12877017	True	NA	NA	False	NA	NA	NA	12881466	12876253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12876364_12878381_12878580_12880801_12880881_12880971_12881153_12881289
transcript_68957.known	chr19	-	1613	3	FSM	ENSG00000105610.6	ENST00000264834.6	1613	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCAGCGTTGGCCTGAAT	NA	False	NA	NA	False	TATAAA	-20	NA	12887201	12884421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12885061_12885316_12886143_12887053
transcript_68959.known	chr19	+	1852	12	FSM	ENSG00000105607.13	ENST00000222214.10	1852	12	0	0	0	0	multi-exon	FALSE	canonical	3	274	junction_1	57.0316716417109	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGAGAAGTAGTTTCA	12885553	True	NA	38	True	NA	NA	NA	12891159	12899999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12891203_12891270_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_68972.known	chr19	+	748	1	FSM	ENSG00000240616.1	ENST00000464444.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	93	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTTTTTGAGTAACAAATA	12894104	False	NA	NA	False	NA	NA	NA	12894132	12894880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12894100_12894900
transcript_68973.known	chr19	+	1867	11	FSM	ENSG00000105607.13	ENST00000591470.5	1867	11	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_1	33.4789486095367	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAGACCTGCACATC	12885553	True	NA	-15	True	NA	NA	NA	12891159	12899946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12891396_12891486_12891523_12891830_12891975_12892115_12892179_12893482_12893654_12895991_12896122_12896204_12896422_12896909_12897014_12897302_12897429_12897702_12897864_12899467
transcript_68976.known	chr19	-	1811	13	FSM	ENSG00000179115.11	ENST00000314606.9	1811	13	0	0	0	0	multi-exon	FALSE	canonical	3	1060	junction_9	81.1570836231947	1623	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGTGGCTTTCCTTAGGG	-12924180	True	NA	-19	True	AATAAA	-18	NA	12933711	12922478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_12922887_12924150_12924266_12924448_12924527_12924638_12924808_12924903_12925004_12925089_12925175_12928341_12928458_12928534_12928664_12928754_12928848_12930222_12930342_12930428_12930528_12930611_12930750_12933549
transcript_68980.known	chr19	+	1901	9	FSM	ENSG00000179218.15	ENST00000316448.10	1901	9	0	0	0	0	multi-exon	FALSE	canonical	3	2768	junction_3	281.249194443291	4540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734575	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_68981.known	chr19	+	1678	10	FSM	ENSG00000179218.15	ENST00000586967.2	1678	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	1047.59471712969	1020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734575	True	NA	25	True	ATTAAA	-17	NA	12938608	12944489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12938771_12939133_12939236_12939427_12939632_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712_12943989_12944211
transcript_68982.known	chr19	+	1661	8	FSM	ENSG00000179218.15	ENST00000588454.6	1661	8	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_2	1115.8936749877	1660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGTGTCTCCTTCTGG	12734611	True	NA	25	True	ATTAAA	-17	NA	12938644	12944489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12938771_12939133_12939236_12940052_12940148_12940242_12940453_12940540_12940655_12940743_12940888_12943536_12943630_12943712
transcript_68985.known	chr19	+	1772	9	FSM	ENSG00000179262.10	ENST00000586534.6	1772	9	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_6	295.16510210389	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTATGGTCTGTGCCTGC	12933556	True	NA	14	True	AATAAA	-14	NA	12945861	12953642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12952688_12952854_12952935
transcript_68988.known	chr19	+	1691	9	FSM	ENSG00000179262.10	ENST00000593114.5	1691	9	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	473.52017842432	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGTGAATAAAGTTT	12945875	True	NA	-15	True	GATAAA	-3	NA	12945893	12953613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948513_12948553_12948685_12948814_12949080_12949160_12949277_12949409_12952688_12952854_12952935
transcript_69.known	ERCC-00144	+	521	1	FSM	ERCC-00144A	DQ854995	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	261	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00144_+_0_500
transcript_69003.known	chr19	+	1871	10	FSM	ENSG00000179262.10	ENST00000651137.1	1871	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	603.367954807752	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCCTATGGTCTGTGCCT	12933553	True	NA	12	True	AATAAA	-12	NA	12945858	12953640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_12946021_12947847_12948010_12948176_12948359_12948496_12948553_12948685_12948814_12949080_12949160_12949274_12949409_12951491_12951590_12952688_12952854_12952935
transcript_69004.nnic	chr19	+	667	2	NNC	ENSG00000008441.19	novel	5459	9	NA	NA	25228	-5	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCGAGAGCGCCTGACCCTT	NA	False	NA	NA	False	AATAAA	-19	NA	13095230	13098791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_13095730_13098623
transcript_69007.nic	chr19	-	2056	17	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_16	117.322988343078	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13116562	False	NA	-11	True	AATAAA	-20	NA	13116759	13104906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_69008.known	chr19	-	2128	17	FSM	ENSG00000104907.13	ENST00000357720.9	2128	17	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_9	67.958627119741	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111428	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_69015.nic	chr19	-	2090	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_8	102.513001885398	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13116592	False	NA	-11	True	AATAAA	-20	NA	13116789	13104906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_69020.known	chr19	-	2127	16	FSM	ENSG00000104907.13	ENST00000593157.5	2127	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_15	120.313959659255	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111428	True	NA	-11	True	AATAAA	-20	NA	13116740	13104906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116341_13116652
transcript_69021.nic	chr19	-	2267	16	NIC	ENSG00000104907.13	novel	2579	18	NA	NA	-30	0	intron_retention	FALSE	canonical	3	272	junction_8	66.8666999002908	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13116592	False	NA	-11	True	AATAAA	-20	NA	13116789	13104906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145_13116432_13116652
transcript_69034.known	chr19	-	2251	15	FSM	ENSG00000104907.13	ENST00000588511.5	2251	15	0	0	0	0	multi-exon	TRUE	canonical	3	44	junction_10	119.42457700087	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAACCAATAAAGAGATGT	-13111413	True	NA	-43	True	GGGGCT	-21	NA	13116725	13104938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112908_13113012_13115278_13115467_13115625_13115769_13115996_13116432_13116652
transcript_6904.nic	chr1	-	1634	9	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	-16	662	-16	-662	5prime_fragment	FALSE	canonical	3	891	junction_2	63.5775854763296	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATTGGGAATCTGTCCT	-71081184	True	NA	-4	True	AATAAA	-14	NA	71081305	71066380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_69072.known	chr19	-	582	4	FSM	ENSG00000104907.13	ENST00000591717.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	198.236110624567	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCAGCACCAGAGGGTGTCG	-13111437	True	NA	NA	False	NA	NA	NA	13116749	13113000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13113012_13115278_13115467_13116145_13116432_13116652
transcript_69073.known	chr19	-	2263	16	FSM	ENSG00000104907.13	ENST00000437766.5	2263	16	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_9	69.9844427156652	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCCTGTGGTTTGTGTAT	-13111337	True	NA	-6	True	AATAAA	-25	NA	13116649	13104901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13109914_13110002_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_69074.known	chr19	-	2179	15	FSM	ENSG00000104907.13	ENST00000221504.12	2179	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	105.887816068879	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGATTGCCTGTGGTTTG	-13111345	True	NA	-11	True	AATAAA	-20	NA	13116657	13104906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13105082_13105266_13105397_13105486_13105607_13107573_13107651_13107750_13107860_13109380_13109467_13109549_13109685_13109768_13109839_13110157_13110307_13112704_13112818_13112895_13113012_13115278_13115467_13115625_13115769_13115996_13116053_13116145
transcript_69079.known	chr19	-	1304	8	FSM	ENSG00000104915.15	ENST00000587230.6	1304	8	0	0	0	0	multi-exon	FALSE	canonical	2	253	junction_6	64.5543593115326	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-13144671	True	NA	1	True	AATAAA	-23	NA	13150375	13144057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149028_13149092_13149498_13149594_13149727_13149898_13150138
transcript_69080.known	chr19	-	1073	6	FSM	ENSG00000104915.15	ENST00000591843.1	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	160.726600163134	689	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-13144583	True	NA	1	True	AATAAA	-23	NA	13150287	13144057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145396_13149712_13149898_13150138
transcript_69081.known	chr19	-	1128	7	FSM	ENSG00000104915.15	ENST00000343587.9	1128	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	145.574055228106	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTGTCGTGTGGTGTGTG	-13144642	True	NA	1	True	AATAAA	-23	NA	13150346	13144057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13144487_13144576_13144672_13144763_13144871_13145287_13145386_13149572_13149594_13149727_13149898_13150138
transcript_69082.known	chr19	+	1291	2	FSM	ENSG00000160888.7	ENST00000587885.1	1291	2	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTACTGTGGGCTGTGCT	13148910	True	NA	NA	False	TTTAAA	-25	NA	13150414	13154249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13150553_13153096
transcript_69083.known	chr19	+	2110	2	FSM	ENSG00000160888.7	ENST00000292433.4	2110	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	3145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTGTCTGGTTTTCTGC	13148906	True	NA	26	True	AATAAA	-22	NA	13150410	13154911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13150553_13152943
transcript_69084.known	chr19	-	1623	3	FSM	ENSG00000141837.22	ENST00000592864.3	1623	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGTGGTCAGTTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	13624489	13518796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13519504_13599752_13600057_13623877
transcript_69085.known	chr19	+	1922	11	FSM	ENSG00000104957.14	ENST00000586600.5	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	40.3286498658212	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGGGTTGTTAGATGGAC	13731313	True	NA	15	True	ATTAAA	-21	NA	13731759	13763296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13731951_13732174_13732286_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_69090.known	chr19	+	1673	10	FSM	ENSG00000104957.14	ENST00000221554.13	1673	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_7	21.8428732338745	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCCTGTCTTGGGTTGTTA	13746143	True	NA	8	True	ATTAAA	-14	NA	13747894	13763289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759011_13759099_13759273_13762298_13762438_13762589
transcript_69096.known	chr19	+	1783	9	FSM	ENSG00000104957.14	ENST00000593174.5	1783	9	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.4409718765899	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTCTCTTCTTCCCTGTCT	13746112	True	NA	-2	True	ATTAAA	-4	NA	13747863	13763279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13747955_13751607_13751812_13754288_13754343_13756196_13756280_13757417_13757474_13757785_13757847_13758867_13759273_13762298_13762438_13762589
transcript_69097.known	chr19	+	617	2	FSM	ENSG00000104957.14	ENST00000587098.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTTCTTTTTTTTTTTT	13731315	True	NA	NA	False	AAAAAG	-8	NA	13731761	13732602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13731951_13732174
transcript_69100.nnic	chr19	+	742	3	NNC	ENSG00000037757.14	novel	3178	6	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	26.5	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTTTGTTCGTAATGTTT	13761623	True	NA	25	True	AATAAA	-20	NA	13764532	13774282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_13764721_13764870_13764919_13773776
transcript_69101.known	chr19	+	504	2	FSM	ENSG00000104979.9	ENST00000221576.4	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTTGCAGTCCTGTGT	13757644	True	NA	14	True	AATAAA	-14	NA	13774478	13778459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774575_13778051
transcript_69102.known	chr19	+	491	2	FSM	ENSG00000104979.9	ENST00000593274.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	770	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTGCAGTCCTGTGTTCG	13774567	True	NA	17	True	AATAAA	-17	NA	13774823	13778462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774904_13778051
transcript_69103.known	chr19	+	897	3	FSM	ENSG00000104979.9	ENST00000588234.6	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	2783	junction_1	52.5	6715	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGGTACTACCTGGTT	13757621	True	NA	NA	False	ATTAAA	-19	NA	13774455	13778773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774575_13774651_13774708_13778051
transcript_69104.known	chr19	+	499	2	FSM	ENSG00000104979.9	ENST00000588841.1	499	2	0	0	0	0	multi-exon	FALSE	canonical	3	2888	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCCAGGTCCTGCCTCCA	13774531	False	NA	-42	True	NA	NA	NA	13774560	13778403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774708_13778051
transcript_69105.known	chr19	+	666	4	FSM	ENSG00000104979.9	ENST00000588858.5	666	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1294.5476258352	639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTTGCAGTCCTGTGTTC	13757683	True	NA	16	True	AATAAA	-16	NA	13774517	13778461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13774575_13774651_13774708_13775470_13775614_13778051
transcript_69109.nnic	chr19	-	1040	5	Intergenic	novelGene_22	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	1.4790199457749	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCCGTTTGGTATATA	-13818057	False	NA	0	True	AATAAA	-18	NA	13818069	13811347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr19_-_13811523_13812793_13813031_13813229_13813441_13816501_13816603_13817753
transcript_69113.known	chr19	+	3117	29	FSM	ENSG00000132024.18	ENST00000589606.5	3117	29	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_23	44.4680577860705	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCGCCCCGGAGCAGGGA	13903131	False	NA	NA	False	NA	NA	NA	13906441	13930659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13906502_13909822_13909959_13912322_13912439_13912527_13912594_13913167_13913303_13913403_13913639_13918069_13918195_13918503_13918577_13918745_13918818_13918911_13919043_13919129_13919203_13919817_13919952_13920556_13920669_13920749_13920923_13923332_13923456_13923547_13923607_13923694_13923812_13926516_13926591_13926666_13926726_13926820_13926873_13926977_13927078_13927174_13927266_13927892_13928031_13928126_13928189_13929378_13929443_13929533_13929661_13930077_13930155_13930241_13930290_13930374
transcript_69118.known	chr19	+	2278	13	FSM	ENSG00000132017.11	ENST00000254337.11	2261	13	-17	0	-17	0	multi-exon	FALSE	canonical	3	327	junction_7	37.0100399291267	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGGTCCTGTCACTGCAG	13944870	True	NA	22	True	AATAAA	-22	NA	13952491	13961449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_13952645_13954339_13954438_13954525_13954662_13955911_13956019_13956122_13956263_13956351_13956523_13959044_13959480_13959581_13959674_13959766_13959896_13959983_13960070_13960286_13960392_13960464_13960581_13960939
transcript_69139.known	chr19	-	502	2	FSM	ENSG00000132000.14	ENST00000588317.1	502	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAATGTTGTTTCAAAA	-13953264	False	NA	NA	False	AATAAA	-19	NA	13953277	13949287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13949631_13953118
transcript_69140.nic	chr19	-	462	3	ISM	ENSG00000132005.9	ENST00000588885.1	886	5	-81	10562	-21	4293	5prime_fragment	FALSE	canonical	0	0	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATTTATTATCATTTTCC	-14004341	True	NA	NA	False	ATTAAA	-14	NA	14006343	13993874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_13993896_13998117_13998318_14006102
transcript_69141.nic	chr19	-	441	2	ISM	ENSG00000132005.9	ENST00000588885.1	886	5	-81	14805	-21	50	5prime_fragment	FALSE	canonical	0	0	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGGTAATATGTTAATGAG	-14004341	True	NA	-1	True	NA	NA	NA	14006343	13998117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_13998318_14006102
transcript_69142.known	chr19	-	241	2	FSM	ENSG00000132005.9	ENST00000588520.1	241	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCGGCTGGAGCAGGACTTC	-13964037	False	NA	NA	False	NA	NA	NA	13964055	13963703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_13963747_13963857
transcript_69143.known	chr19	+	2950	14	FSM	ENSG00000104998.4	ENST00000263379.4	2950	14	0	0	0	0	multi-exon	TRUE	canonical	3	90	junction_1	12.4396769302976	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGCTTTGAGGTCTTTT	14029932	True	NA	10	True	AATAAA	-21	NA	14031761	14053218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14031973_14032385_14032504_14039507_14039666_14039752_14039911_14042452_14042613_14042715_14042790_14046153_14046338_14046429_14046619_14048980_14049083_14049155_14049315_14050757_14050884_14051606_14051701_14051879_14051974_14052095
transcript_69146.nic	chr19	+	521	2	ISM	ENSG00000104998.4	ENST00000263379.4	2950	14	-55	20578	-55	-20578	5prime_fragment	TRUE	canonical	3	90	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATTAC	14029877	True	NA	NA	False	AATACA	-6	NA	14031706	14032640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_14031973_14032385
transcript_69147.known	chr19	-	2383	5	FSM	ENSG00000187867.10	ENST00000589048.2	2383	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	6.57171971404746	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	-14055800	True	NA	-9	True	AATAAA	-17	NA	14057599	14053366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350
transcript_69148.nnic	chr19	-	2224	5	NNC	ENSG00000187867.10	novel	2383	5	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_4	18.0277563773199	128	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	-14055817	True	NA	-9	True	AATAAA	-17	NA	14057616	14053366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057526
transcript_69149.known	chr19	-	2401	7	FSM	ENSG00000187867.10	ENST00000669674.2	2401	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.9450634382434	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGCTTGAATGTGTGTGT	-14062060	False	NA	-9	True	AATAAA	-17	NA	14062076	14053366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14055227_14055379_14055426_14056428_14056514_14056661_14056805_14057350_14057432_14059114_14059164_14061939
transcript_69150.known	chr19	+	1535	3	FSM	ENSG00000141854.10	ENST00000587086.3	1523	3	-12	0	-12	0	multi-exon	FALSE	canonical	2	9	junction_2	7.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCAGCCTGTTTTTTTCTG	14072619	True	NA	NA	False	AATAAA	-19	NA	14072773	14075062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14073878_14074389_14074464_14074705
transcript_69151.known	chr19	+	708	3	FSM	ENSG00000141854.10	ENST00000590772.1	708	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTGACTGTTAAGAGGG	14073488	True	NA	NA	False	NA	NA	NA	14073581	14074978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14073878_14074324_14074464_14074705
transcript_69153.known	chr19	-	750	5	FSM	ENSG00000141858.12	ENST00000269724.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_4	214.935310035369	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTAGGCTGAGCGCCCAG	-14091026	False	NA	NA	False	NA	NA	NA	14091036	14088428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14090937
transcript_69154.known	chr19	-	2196	5	FSM	ENSG00000141858.12	ENST00000533683.7	2196	5	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_4	7.56224173112709	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGAAAAAAAAGCCACGGAG	-14087052	True	NA	-14	True	AATAAA	-19	NA	14090751	14087850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14088576_14088670_14088783_14088879_14088977_14089067_14089363_14089784
transcript_69156.known	chr19	-	1689	4	FSM	ENSG00000105011.9	ENST00000263382.8	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_2	14.522013940528	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGATTGTTTGTGCTTTTGTC	-14132853	True	NA	-4	True	ATTAAA	-39	NA	14136589	14119511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14120666_14121531_14121709_14126121_14126238_14136347
transcript_69158.known	chr19	-	587	3	FSM	ENSG00000105011.9	ENST00000589468.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	114.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCCTCCTCCCTGAGAA	-14132853	True	NA	NA	False	GGGGCT	-14	NA	14136589	14120497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14120666_14121531_14121709_14136347
transcript_69159.known	chr19	-	765	3	FSM	ENSG00000105011.9	ENST00000474890.1	765	3	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_1	17.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAATGAGCCAGA	-14132838	True	NA	NA	False	NA	NA	NA	14136574	14121286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14121709_14126121_14126238_14136347
transcript_69163.known	chr19	+	2894	3	FSM	ENSG00000267169.2	ENST00000588387.2	2894	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCCAATCTCAGGTATTT	14136900	True	NA	NA	False	ATTAAA	-18	NA	14137145	14171264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14137224_14155151_14155480_14168776
transcript_69164.nic	chr19	+	558	3	NIC	ENSG00000267169.2	novel	2894	3	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTCAGGTATTTCTT	14136890	True	NA	NA	False	ATTAAA	-21	NA	14137135	14171267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_14137224_14155151_14155480_14171125
transcript_69165.known	chr19	+	686	2	FSM	ENSG00000267169.2	ENST00000588658.1	686	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTAGGCTATATTTGCTG	14136942	True	NA	NA	False	NA	NA	NA	14137187	14155801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14137224_14155151
transcript_69174.known	chr19	+	768	2	FSM	ENSG00000267147.2	ENST00000588275.2	768	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACTTTGTGATATTCCCC	NA	False	NA	NA	False	AATATA	-22	NA	14333742	14343916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14334020_14343425
transcript_69176.known	chr19	+	2751	18	FSM	ENSG00000123146.20	ENST00000358600.7	2751	18	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	3.47208342667617	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAAAGTCCAGGACACCC	NA	False	NA	NA	False	NA	NA	NA	14381155	14408275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14381546_14388449_14388501_14388701_14388819_14390923_14391080_14397657_14397805_14397888_14397936_14398061_14398140_14401385_14401564_14401652_14401761_14402596_14402863_14404382_14404563_14405747_14405940_14406330_14406558_14406699_14406767_14406868_14406961_14407060_14407230_14407907_14408010_14408091
transcript_6918.nic	chr1	-	467	6	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	226	6516	-28	-6516	5prime_fragment	FALSE	canonical	3	938	junction_1	59.756171229422	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAGAGGGAAAGCAGTTGG	-71063518	True	NA	NA	False	AAAAAG	-7	NA	71081063	71072234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_69183.known	chr19	-	1498	11	FSM	ENSG00000123136.15	ENST00000242776.9	1498	11	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_6	53.5148577499744	3682	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTTGGTCATCTTGGCCT	-14405963	True	NA	0	True	AATAAA	-37	NA	14419341	14408797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409535_14409646_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_69184.known	chr19	-	1355	10	FSM	ENSG00000123136.15	ENST00000324340.13	1355	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	347.12718699436	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14405951	True	NA	-21	True	AATAAA	-16	NA	14419329	14408818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409448_14409741_14409874_14410215_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_69185.known	chr19	-	1903	9	FSM	ENSG00000123136.15	ENST00000589318.5	1903	9	0	0	0	0	multi-exon	FALSE	canonical	3	948	junction_4	58.5030715005631	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTCCCACCCCATCT	-14405959	True	NA	-21	True	AATAAA	-16	NA	14419337	14408818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14408953_14409036_14409185_14409302_14409646_14409741_14410335_14410988_14411173_14411505_14411599_14412550_14412679_14413012_14413225_14419269
transcript_69186.known	chr19	-	988	4	FSM	ENSG00000123136.15	ENST00000590260.5	988	4	0	0	0	0	multi-exon	FALSE	canonical	3	1077	junction_2	29.698484809835	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGGAGCTTCAGCCTAAA	-14406002	True	NA	NA	False	NA	NA	NA	14419380	14411061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14411599_14412550_14412679_14413012_14413225_14419269
transcript_69188.known	chr19	-	1413	3	FSM	ENSG00000160951.4	ENST00000292513.4	1413	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCAGGCAGGACCGTGTGT	-14475342	False	18	-4	True	AATAAA	-15	NA	14475354	14472465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14472827_14473378_14474338_14475261
transcript_69190.known	chr19	-	1921	9	FSM	ENSG00000123159.16	ENST00000393033.9	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_8	170.087293764114	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491755	True	NA	-2	True	CATAAA	-17	NA	14496127	14477761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14492856_14492913_14496036
transcript_69191.known	chr19	-	1386	8	FSM	ENSG00000123159.16	ENST00000586027.5	1386	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_7	152.550694150221	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-14491760	True	NA	NA	False	NA	NA	NA	14496132	14478245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14482688_14483007_14491655_14491744_14496036
transcript_69192.nic	chr19	-	1572	8	NIC	ENSG00000123159.16	novel	1921	9	NA	NA	31	0	combination_of_known_junctions	FALSE	canonical	3	92	junction_5	266.771552502304	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACCTGTGTGGCTTCGGGG	-14491724	True	NA	-2	True	CATAAA	-17	NA	14496096	14477761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14492856_14492913_14496036
transcript_69194.known	chr19	-	1068	7	FSM	ENSG00000123159.16	ENST00000591349.5	1068	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_5	279.895466598197	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCCCTGGTTCCCAGTC	-14491760	True	NA	NA	False	NA	NA	NA	14496132	14478245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14491655_14491744_14496036
transcript_69197.known	chr19	-	1483	6	FSM	ENSG00000123159.16	ENST00000393028.5	1483	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_5	302.425792550834	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGTGGCTTCGGGGTG	-14491777	True	NA	0	True	CATAAA	-19	NA	14496149	14477759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14478568_14478683_14478766_14479411_14479525_14480304_14480486_14480592_14480779_14496036
transcript_69203.known	chr19	-	2180	4	FSM	ENSG00000132002.9	ENST00000601533.6	2180	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.478955692153	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCTAAACCTCAGGGGAG	-14529290	False	NA	-18	True	ATTAAA	-5	NA	14529308	14514782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529221
transcript_69204.known	chr19	-	2600	4	FSM	ENSG00000132002.9	ENST00000594099.6	2600	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	412.478955692153	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-14529785	False	NA	-4	True	ATTAAA	-19	NA	14529803	14514768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14527686_14527811_14529310
transcript_69205.known	chr19	-	2147	4	FSM	ENSG00000132002.9	ENST00000678009.1	2147	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	411.305509593808	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-14529282	False	NA	-4	True	ATTAAA	-19	NA	14529300	14514768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14527725_14527811_14529221
transcript_69206.known	chr19	-	626	3	FSM	ENSG00000132002.9	ENST00000677790.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACGGCCTAAGCTGCGGC	-14529255	False	NA	NA	False	ATTAAA	-26	NA	14529273	14526174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14526613_14527686_14527811_14529209
transcript_6921.nic	chr1	-	439	5	ISM	ENSG00000132485.14	ENST00000611683.1	1257	10	233	6753	-21	-6753	5prime_fragment	FALSE	canonical	3	958	junction_4	57.1161098115059	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGCTATATTTTGGTGTT	-71063511	True	NA	0	True	AATATA	-36	NA	71081056	71072471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_69210.known	chr19	-	2242	3	FSM	ENSG00000132002.9	ENST00000254322.3	2242	3	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	47	475	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGCGGTCCTGTGACTC	-14514297	True	NA	-4	True	ATTAAA	-19	NA	14518397	14514768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14516171_14516465_14517047_14518138
transcript_69213.known	chr19	-	263	2	FSM	ENSG00000132002.9	ENST00000601087.2	263	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTCTTCTGGAAACTCA	-14529328	False	NA	NA	False	NA	NA	NA	14529346	14527583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14527811_14529310
transcript_69216.known	chr19	-	2534	2	FSM	ENSG00000132002.9	ENST00000595139.2	2534	2	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCTAAACCTCAGGGGAGC	-14514307	True	NA	-17	True	ATTAAA	-6	NA	14518407	14514781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14517047_14518138
transcript_69217.known	chr19	+	1139	13	FSM	ENSG00000099797.15	ENST00000215567.10	1139	13	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	91.7154415691394	4242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14501125	True	NA	8	True	AATAAA	-21	NA	14529593	14565980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_69218.known	chr19	+	1170	13	FSM	ENSG00000099797.15	ENST00000642961.1	1170	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	407.909329181539	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCGGGCTCTGTGTGTT	14501123	True	NA	5	True	AATAAA	-18	NA	14529591	14565977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563173_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_69219.known	chr19	+	1204	13	FSM	ENSG00000099797.15	ENST00000600083.5	1204	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	435.96549143507	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGGGCTCTGTGTGTTTCT	14501125	True	NA	8	True	AATAAA	-21	NA	14529593	14565980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563140_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_69220.known	chr19	+	720	5	FSM	ENSG00000099797.15	ENST00000593775.5	720	5	0	0	0	0	multi-exon	FALSE	canonical	3	1452	junction_2	52.4452095047775	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGGACTCGGGCTCTGTGTG	14564567	True	NA	3	True	AATAAA	-16	NA	14564697	14565975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_69221.known	chr19	+	584	6	FSM	ENSG00000099797.15	ENST00000599101.5	584	6	0	0	0	0	multi-exon	FALSE	canonical	3	1452	junction_3	54.8357547590986	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGGGCCCACAGCTCTCC	14564563	True	NA	-47	True	NA	NA	NA	14564693	14565925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14564859_14564948_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_69222.known	chr19	+	1164	12	FSM	ENSG00000099797.15	ENST00000597607.5	1164	12	0	0	0	0	multi-exon	FALSE	canonical	3	1352	junction_5	94.8614474635298	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTCGGGCTCTGTGTGTTT	14501188	True	NA	6	True	AATAAA	-19	NA	14529656	14565978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_14529712_14562524_14562576_14563205_14563258_14563657_14563703_14563799_14563904_14563981_14564098_14564181_14564288_14564785_14564993_14565065_14565124_14565201_14565291_14565617_14565664_14565743
transcript_6924.known	chr1	-	1257	10	FSM	ENSG00000132485.14	ENST00000611683.1	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_1	174.398507752139	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCAGGGCCAACCCCTACG	-71081168	True	NA	NA	False	ACTAAA	-10	NA	71081289	71065718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_71065753_71066775_71066935_71069275_71069363_71070826_71070997_71072120_71072256_71072471_71072549_71076794_71076878_71078456_71078566_71078655_71078709_71080939
transcript_69244.known	chr19	-	535	3	FSM	ENSG00000099795.7	ENST00000215565.3	535	3	0	0	0	0	multi-exon	FALSE	canonical	3	2899	junction_2	78	31938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-14538187	True	NA	-4	True	AATAAA	-19	NA	14572066	14566077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14566266_14566764_14566934_14571888
transcript_69245.known	chr19	-	529	3	FSM	ENSG00000099795.7	ENST00000593353.5	529	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1527.5	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGAGTCCCCTCTTACTGC	-14538183	True	NA	-4	True	AATAAA	-19	NA	14572062	14566077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_14566266_14566764_14566932_14571888
transcript_69250.nic	chr19	+	633	2	ISM	ENSG00000160961.12	ENST00000596285.5	573	5	7	5417	7	-5417	5prime_fragment	TRUE	canonical	3	69	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAATTAAAAAGT	14688711	True	NA	NA	False	AGTAAA	-26	NA	14690061	14693994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_14690151_14693450
transcript_69253.nic	chr19	-	742	3	ISM	ENSG00000105143.13	ENST00000221742.7	1719	9	18535	-146	18535	0	3prime_fragment	FALSE	canonical	3	19	junction_1	1.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAAGGTCTCTGTTTCTCT	NA	False	NA	NA	False	AATAAA	-20	NA	14954383	14950032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_14950391_14952927_14953063_14954134
transcript_69258.nic	chr19	-	2468	16	NIC	ENSG00000105135.16	novel	2305	16	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	67	junction_15	108.997736979566	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15123357	True	NA	-13	True	AATAAA	-29	NA	15125673	15114986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125379
transcript_69259.known	chr19	-	2305	16	FSM	ENSG00000105135.16	ENST00000263383.8	2305	16	0	0	0	0	multi-exon	FALSE	canonical	3	315	junction_15	53.8274609800198	334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15123470	True	NA	-13	True	AATAAA	-29	NA	15125786	15114986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924_15125070_15125655
transcript_6926.known	chr1	+	4608	4	FSM	ENSG00000229956.11	ENST00000455406.6	4608	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAATAAAAGAATCCAAGAA	NA	False	NA	NA	False	NA	NA	NA	71081323	71241548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_71081414_71091663_71091705_71223056_71223115_71237129
transcript_69266.nic	chr19	-	2490	15	ISM	ENSG00000105135.16	ENST00000263383.8	2305	16	401	0	-23	0	3prime_fragment	FALSE	canonical	3	417	junction_10	35.2632230228489	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTCTCAGAACCTGTGC	-15125375	False	2316	-13	True	AATAAA	-29	NA	15125385	15114986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15124924
transcript_69284.known	chr19	-	2067	15	FSM	ENSG00000105135.16	ENST00000534378.5	2067	15	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_14	125.073957712864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTCTGGCCCATGTAG	-15123406	True	NA	-42	True	NA	NA	NA	15125722	15115015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15115431_15115565_15115672_15115849_15115922_15116000_15116072_15116151_15116322_15116407_15116523_15117880_15118016_15119165_15119303_15119417_15119516_15119981_15120082_15122692_15122805_15122891_15123031_15123115_15123244_15123374_15123577_15125655
transcript_69290.known	chr19	-	1821	9	FSM	ENSG00000141867.19	ENST00000594841.5	1821	9	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_8	395.557972205087	175	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACGAAGAAAAATAATAGCAG	-15320006	False	11900	7	True	AATAAA	-34	NA	15331906	15256098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15256264_15256963_15257174_15263419_15263549_15264403_15264767_15265353_15265644_15267415_15267552_15268904_15269043_15272814_15273134_15331835
transcript_69294.known	chr19	-	3665	14	FSM	ENSG00000105127.10	ENST00000269701.7	3665	14	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_13	14.9555554578643	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCACTAGTGGAACTGCTT	-15375264	True	NA	NA	False	ATTAAA	-17	NA	15379787	15353384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15376975_15377015_15379712
transcript_69296.known	chr19	-	3609	13	FSM	ENSG00000105127.10	ENST00000680245.1	3609	13	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	61.5987802007655	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTAGTGCAGAAAAACATCA	-15375262	True	NA	NA	False	ATTAAA	-2	NA	15379785	15353399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15355371_15358966_15359063_15360847_15360979_15361728_15361823_15362109_15362252_15368234_15368323_15370145_15370180_15371951_15371999_15372217_15372348_15372850_15373341_15373785_15374066_15374602_15374636_15379712
transcript_69298.known	chr19	-	1453	8	FSM	ENSG00000011243.19	ENST00000594893.5	1453	8	0	0	0	0	multi-exon	FALSE	canonical	2	662	junction_5	103.393837893202	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGCAGTTTTTACGGCTCT	-15408772	True	NA	NA	False	NA	NA	NA	15418968	15399934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_69299.known	chr19	-	2251	16	FSM	ENSG00000011243.19	ENST00000594594.6	2251	16	0	0	0	0	multi-exon	FALSE	canonical	2	74	junction_12	300.621681778869	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCGGGTTTCTCTGTTAC	-15419110	False	NA	-10	True	AATAAA	-15	NA	15419121	15380049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15380431_15380516_15380613_15397149_15397281_15397519_15397626_15397713_15397856_15398629_15398767_15399301_15399411_15400294_15400359_15400793_15400865_15400946_15401044_15401149_15401604_15403474_15403556_15403652_15403716_15404009_15404043_15410519_15410595_15418910
transcript_69300.nic	chr19	-	937	5	ISM	ENSG00000011243.19	ENST00000594893.5	1453	8	-76	1215	0	-182	5prime_fragment	FALSE	canonical	2	662	junction_2	117.597831612662	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGAGGCAGCCTTCC	-15408848	True	NA	NA	False	NA	NA	NA	15419044	15401149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_15401604_15403474_15403716_15404009_15404043_15410519_15410595_15418910
transcript_69302.known	chr19	-	3266	18	FSM	ENSG00000105122.13	ENST00000343625.12	3266	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	2.1994022465694	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTTTCTTTGCCCAC	-15464507	True	NA	0	True	AGTAAA	-19	NA	15464544	15451623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15451939_15452044_15452109_15452657_15452816_15453106_15453498_15454148_15454268_15454360_15454563_15454656_15454894_15456103_15456249_15456501_15456647_15457291_15457835_15458327_15458427_15458528_15458656_15460202_15460259_15461059_15461122_15461217_15461297_15461470_15461608_15464030_15464378_15464504
transcript_69303.known	chr19	-	4278	16	FSM	ENSG00000105122.13	ENST00000602101.6	4278	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.11869981094276	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGTGGTTTCTTTGCCCAC	-15464477	False	NA	0	True	AGTAAA	-19	NA	15464514	15451623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15451939_15452044_15452816_15453106_15453498_15454148_15454268_15454360_15454563_15454656_15454894_15456103_15456249_15456501_15456647_15457291_15458427_15458528_15458656_15460202_15460259_15461059_15461122_15461217_15461297_15461470_15461608_15464030_15464378_15464504
transcript_69304.nic	chr19	+	1129	7	ISM	ENSG00000171954.13	ENST00000269703.8	2609	14	-45	14078	-45	-14077	5prime_fragment	FALSE	canonical	3	14	junction_3	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTTGGTATAAAGTAGGT	15508342	True	NA	NA	False	ATTAAA	-19	NA	15508479	15538239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_15508584_15523692_15523800_15525335_15525559_15529708_15529854_15537360_15537415_15537534_15537663_15537871
transcript_69305.nnic	chr19	-	758	2	NNC	ENSG00000267308.3	novel	775	2	NA	NA	-1254	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATAGATACTTGTGCTTC	NA	False	NA	NA	False	ATTAAA	-24	NA	15837107	15827044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_15827225_15836529
transcript_69307.known	chr19	-	375	3	FSM	ENSG00000267453.8	ENST00000588182.3	491	3	66	50	33	-50	multi-exon	FALSE	canonical	0	0	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGGCTCTGAATCCCC	-15862965	False	NA	NA	False	NA	NA	NA	15862975	15852042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_15852250_15854732_15854837_15862911
transcript_69313.known	chr19	+	2491	9	FSM	ENSG00000167460.17	ENST00000586833.7	2491	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	1245.78978463463	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATGTAATAGTATCACTTTT	16076093	True	NA	21	True	AATAAA	-32	NA	16077015	16102946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16077131_16080914_16081076_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_69315.known	chr19	+	2474	8	FSM	ENSG00000167460.17	ENST00000643579.2	2474	8	0	0	0	0	multi-exon	FALSE	canonical	3	2686	junction_2	105.607088506677	1170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATTTGCGTGAATTTTAGA	16034689	True	NA	11	True	AATAAA	-16	NA	16076494	16103002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16076698_16081912_16082047_16086422_16086541_16088026_16088098_16089044_16089121_16093535_16093599_16093683_16093754_16101263
transcript_6932.nic	chr1	-	667	6	NIC	ENSG00000225087.2	novel	525	5	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	4.99599839871872	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	-72898718	True	NA	NA	False	AATAAA	-21	NA	72899263	72748918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_72749029_72749165_72749277_72766644_72766688_72850749_72850801_72898766_72898884_72899028
transcript_69323.known	chr19	+	2567	8	FSM	ENSG00000167461.12	ENST00000300935.8	2567	8	0	0	0	0	multi-exon	FALSE	canonical	3	943	junction_6	82.8551723903628	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTGTAATGTGTCTTTTG	16103152	True	NA	16	True	NA	NA	NA	16111888	16134234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129553_16129605_16132211
transcript_69325.known	chr19	+	1315	8	FSM	ENSG00000167461.12	ENST00000586682.1	1315	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	383.057889800975	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATCAAGGGGACGCTGTG	16103160	True	NA	NA	False	NA	NA	NA	16111896	16133010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16112026_16118225_16118287_16121749_16121811_16125469_16125548_16127436_16127527_16128025_16128092_16129573_16129605_16132211
transcript_6933.known	chr1	-	525	5	FSM	ENSG00000225087.2	ENST00000666164.1	525	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	2.17944947177034	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	-72898431	False	NA	NA	False	AATAAA	-21	NA	72898976	72748918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72749029_72749165_72749277_72766644_72766688_72850749_72850801_72898766
transcript_69336.known	chr19	+	1957	6	FSM	ENSG00000196684.12	ENST00000613986.4	1957	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	1.95959179422654	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACGCTGCAGGGTCTCTCT	16143559	True	NA	NA	False	AATAAA	-33	NA	16143684	16158575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16143775_16148723_16148876_16152551_16152642_16153042_16153209_16154398_16154492_16157209
transcript_69340.known	chr19	+	1364	4	FSM	ENSG00000196684.12	ENST00000586872.5	1364	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	1.69967317119759	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGACCTAAAGCAACACCT	16143559	True	NA	NA	False	NA	NA	NA	16143684	16154863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16143775_16148723_16148876_16152551_16153209_16154398
transcript_69342.known	chr19	+	896	5	FSM	ENSG00000105058.12	ENST00000585831.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	532.34311069084	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCGTGGGCGCCCTTCCAAG	16175665	True	NA	NA	False	NA	NA	NA	16185432	16191378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16185517_16185623_16185766_16189387_16189512_16190519_16190574_16190886
transcript_69345.known	chr19	+	1463	4	FSM	ENSG00000105058.12	ENST00000263384.12	1463	4	0	0	0	0	multi-exon	FALSE	canonical	3	987	junction_2	40.8765077873452	2360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGAGTGTCTTCTTTTTT	16175642	True	NA	19	True	AATAAA	-21	NA	16185409	16192046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16185517_16185623_16185766_16190519_16190574_16190886
transcript_69349.known	chr19	+	401	3	FSM	ENSG00000105058.12	ENST00000587351.1	401	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	541	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCATAAATGTGTGCAG	16175687	True	NA	NA	False	GATAAA	-13	NA	16185454	16186649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16185517_16185623_16185766_16186452
transcript_6935.nic	chr1	-	616	5	NIC	ENSG00000225087.2	novel	525	5	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	6.22494979899437	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	-72898718	True	NA	NA	False	AATAAA	-21	NA	72899263	72748918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_72749029_72749165_72749277_72766644_72766688_72898766_72898884_72899028
transcript_69350.known	chr19	+	798	3	FSM	ENSG00000105058.12	ENST00000588367.5	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	518	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGCAACTATGCGGCCTT	16175655	True	NA	NA	False	NA	NA	NA	16185422	16191448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16185517_16185623_16185766_16190886
transcript_69353.known	chr19	+	12859	12	FSM	ENSG00000072958.9	ENST00000291439.8	12859	12	0	0	0	0	multi-exon	FALSE	canonical	3	299	junction_6	26.5227175352479	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTCATTGTTTTCCTTT	16197351	True	NA	NA	False	AATAAA	-23	NA	16197910	16245906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16198069_16203458_16203616_16206340_16206409_16208018_16208150_16209029_16209178_16226420_16226548_16227547_16227691_16228136_16228209_16228769_16228929_16233492_16233619_16234198_16234275_16234412
transcript_69354.known	chr19	-	3216	24	FSM	ENSG00000127527.14	ENST00000455140.7	3216	24	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	59.85616028769	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGAGAAGCTTCTTTAATC	-16468950	True	NA	NA	False	TATAAA	-42	NA	16471970	16355246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16355852_16361778_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_69355.known	chr19	-	3082	23	FSM	ENSG00000127527.14	ENST00000602022.5	3082	23	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	53.486558904748	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTCTTTAATCTCTGTAAA	-16468941	True	NA	NA	False	TATAAA	-25	NA	16471961	16355238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16355852_16361778_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_69356.known	chr19	-	2924	23	FSM	ENSG00000127527.14	ENST00000248070.10	2924	23	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	48.4370811098923	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTTTGGATGCTCTATCA	-16469065	True	NA	-21	True	AATAAA	-14	NA	16472085	16361580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_69358.known	chr19	-	2666	22	FSM	ENSG00000127527.14	ENST00000535753.6	2666	22	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	37.6890848944546	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAGAGCCGCAG	-16468956	True	NA	-37	True	AAGAAA	-15	NA	16471976	16361596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16361985_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_6936.known	chr1	-	499	5	FSM	ENSG00000225087.2	ENST00000445976.1	499	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.91607978309962	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTGTGCCTATGGGTCTCC	-72898595	True	NA	NA	False	AATAAA	-19	NA	72899140	72748920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72749029_72749165_72749277_72850749_72850801_72898766_72898884_72899028
transcript_69361.known	chr19	-	3486	16	FSM	ENSG00000127527.14	ENST00000597937.5	3486	16	0	0	0	0	multi-exon	FALSE	canonical	3	195	junction_10	18.7177871436651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTGGCTTGTTTCTATTT	-16468930	True	NA	NA	False	AATACA	-15	NA	16471950	16400630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440861_16440910_16441891_16441982_16442177_16442220_16471912
transcript_69362.known	chr19	-	420	4	FSM	ENSG00000127527.14	ENST00000602151.1	420	4	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_2	17.326921891156	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTATTTATTTTTCTT	-16468923	True	NA	NA	False	TTTAAA	-42	NA	16471943	16440652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16440910_16441891_16441982_16442177_16442220_16471912
transcript_69363.known	chr19	-	2788	23	FSM	ENSG00000127527.14	ENST00000592031.5	2788	23	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_19	63.022100282099	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTGGATGCTCTATCATA	-16468950	True	NA	-19	True	AATAAA	-16	NA	16471970	16361578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16361985_16377121_16377255_16385128_16385212_16386170_16386232_16392303_16392441_16393950_16394002_16395343_16395468_16402320_16402486_16403732_16403931_16404587_16404750_16413772_16413846_16417551_16417638_16417947_16418105_16421318_16421477_16425082_16425317_16428701_16428762_16434364_16434491_16436936_16437000_16437769_16437866_16440884_16440910_16441891_16441982_16442177_16442220_16471912
transcript_69364.known	chr19	-	1263	9	FSM	ENSG00000269058.6	ENST00000269881.8	1263	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.93245310421754	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTACATGGCACTTTGTC	-16496070	True	NA	NA	False	NA	NA	NA	16496167	16479060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16479275_16480613_16480707_16482449_16482582_16482677_16482786_16483929_16484116_16485162_16485258_16490366_16490571_16495750_16495853_16496038
transcript_69369.known	chr19	+	3346	9	FSM	ENSG00000105072.9	ENST00000221671.8	3346	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	3.86490620843508	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACGTGTGTGCTGTGCCT	16495770	True	NA	4	True	ATTAAA	-17	NA	16496393	16521352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16496466_16500791_16501552_16503064_16503381_16506700_16506775_16509498_16509989_16513013_16513110_16514496_16514664_16517229_16517342_16520093
transcript_69370.nnic	chr19	+	799	2	Genic_Genomic	ENSG00000269399.2	novel	2069	1	NA	NA	-442	-2	multi-exon	FALSE	canonical	2	3	junction_1	0	47	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCAGGTGTTC	NA	False	NA	17	True	AATAAA	-18	NA	16542303	16544812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_+_16542680_16544389
transcript_69371.nnic	chr19	+	654	2	Genic_Genomic	ENSG00000269399.2	novel	2069	1	NA	NA	-133	0	multi-exon	FALSE	canonical	0	0	junction_1	0	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTCTCAGGTGTTCTT	16542451	True	NA	19	True	AATAAA	-20	NA	16542612	16544814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_+_16542842_16544389
transcript_69389.known	chr19	-	1281	5	FSM	ENSG00000214046.9	ENST00000465250.6	1281	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	296.788961216552	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCGTGTGTGTGTTGTGT	-16651479	True	NA	-20	True	AATAAA	-7	NA	16660130	16630750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16631725_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_6939.known	chr1	-	791	4	FSM	ENSG00000225087.2	ENST00000654386.1	791	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.54247233265651	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGTCTAAATCCTGAT	-72898691	True	NA	NA	False	AATAAA	-39	NA	72899236	72697450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72697806_72749165_72749277_72898766_72898884_72899028
transcript_69390.known	chr19	-	1065	6	FSM	ENSG00000214046.9	ENST00000593404.5	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	212.5338561265	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_69391.known	chr19	-	1360	5	FSM	ENSG00000214046.9	ENST00000487416.7	1360	5	0	0	0	0	multi-exon	FALSE	canonical	3	640	junction_1	34.3611335668659	1018	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGTTTATACTTTTTT	-16651493	True	NA	-1	True	AATAAA	-19	NA	16660144	16646147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16647262_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_69392.known	chr19	-	1075	4	FSM	ENSG00000214046.9	ENST00000597711.5	1075	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	250.221679494182	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGATTTGCTTGTTGA	-16651493	True	NA	-40	True	AATGAA	-30	NA	16660144	16646341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16647262_16659394_16659448_16659958_16660001_16660084
transcript_69393.known	chr19	-	534	5	FSM	ENSG00000214046.9	ENST00000602194.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	270.613539018283	261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATGACTTTGGGAGCCA	-16651493	True	NA	-39	True	NA	NA	NA	16660144	16646587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16646801_16647095_16647262_16659394_16659448_16659958_16660001_16660084
transcript_69394.known	chr19	-	850	5	FSM	ENSG00000214046.9	ENST00000358726.6	850	5	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	263.923639524769	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCGCCTGCCTATAGTTC	-16651491	True	NA	NA	False	AATAAA	-18	NA	16660142	16652355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16652962_16654034_16654126_16659394_16659448_16659958_16660001_16660084
transcript_69395.known	chr19	-	580	5	FSM	ENSG00000214046.9	ENST00000600740.5	580	5	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	230.760021450857	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAGAAGACATGTGGAGCA	-16651435	True	NA	-110	True	ACTAAA	-43	NA	16660086	16646658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_16646801_16647095_16647262_16654034_16654126_16659394_16659448_16659958
transcript_69396.known	chr19	+	2631	6	FSM	ENSG00000072954.7	ENST00000187762.7	2631	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_5	30.3802567467755	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCATGGCTTGTCTGATT	16659956	True	NA	NA	False	AATAAA	-15	NA	16661138	16690023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16661342_16679983_16680141_16680396_16680582_16682420_16682509_16686287_16686406_16688143
transcript_69397.known	chr19	+	798	3	FSM	ENSG00000072954.7	ENST00000595452.1	798	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_2	8.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACGAGATGCCAGTAGCACA	16660059	False	NA	NA	False	NA	NA	NA	16661241	16680937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_16661342_16679983_16680141_16680396
transcript_69403.known	chr19	-	1055	11	FSM	ENSG00000131351.15	ENST00000598517.5	1055	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	86.0853646097872	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATCAAGACAGTGCCTGC	-17071970	True	NA	NA	False	NA	NA	NA	17075422	17050063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069100_17073273_17073336_17075393
transcript_69407.nnic	chr19	-	1426	10	NIC	ENSG00000131351.15	novel	1545	11	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	9	junction_1	85.291801235668	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCCATTTTCTATGAAGG	NA	False	NA	-31	True	AGTAAA	-18	NA	17075645	17049760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_17050177_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17062697_17062780_17069030_17069087_17073273_17073336_17075393
transcript_69408.nic	chr19	-	1481	10	NIC	ENSG00000131351.15	novel	1407	11	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_7	84.4043764589971	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGCCTCCATTTTCTAT	NA	False	NA	-36	True	AGTAAA	-13	NA	17075645	17049765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_17050177_17052824_17052967_17055860_17056003_17058548_17058708_17058810_17058877_17059556_17059652_17059996_17060093_17069030_17069087_17073273_17073336_17075393
transcript_69416.known	chr19	+	845	8	FSM	ENSG00000053501.14	ENST00000263897.10	845	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	37.4754341304448	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214498	True	NA	9	True	AATAAA	-16	NA	17215356	17219829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_69422.known	chr19	+	637	7	FSM	ENSG00000053501.14	ENST00000596136.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	46.4928309885872	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214531	True	NA	9	True	AATAAA	-16	NA	17215389	17219829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_69424.known	chr19	+	795	7	NNC	ENSG00000053501.14	novel	845	8	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	39.5881576007551	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214539	True	NA	9	True	AATAAA	-16	NA	17215397	17219829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216323_17218363_17218392_17219212_17219388_17219630
transcript_69428.known	chr19	+	587	7	FSM	ENSG00000053501.14	ENST00000593597.1	587	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	40.3956130731489	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTCACTGAAAATGGCGGAC	17215138	True	NA	NA	False	NA	NA	NA	17215719	17219640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219212_17219388_17219630
transcript_6943.nic	chr1	-	573	4	NIC	ENSG00000225087.2	novel	499	5	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	6.79869268479038	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCCTATGGGTCTCCTG	-72898718	True	NA	NA	False	AATAAA	-21	NA	72899263	72748918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_72749029_72749165_72749277_72898766_72898884_72899028
transcript_69432.nic	chr19	+	623	6	ISM	ENSG00000053501.14	ENST00000596136.5	637	7	308	0	-22	0	3prime_fragment	FALSE	canonical	0	0	junction_4	50.2847889525252	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214839	False	NA	9	True	AATAAA	-16	NA	17215697	17219829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452_17217463_17218363_17218392_17219630
transcript_69434.nic	chr19	+	789	6	NNC	ENSG00000053501.14	novel	845	8	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	43.346972212601	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGTCTTCCGTCTGTCC	17214839	False	NA	9	True	AATAAA	-16	NA	17215697	17219829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_17215852_17215991_17216071_17216168_17216323_17218363_17218392_17219212_17219388_17219630
transcript_69436.known	chr19	+	1776	5	FSM	ENSG00000053501.14	ENST00000595101.5	1776	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	26.8001865665148	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	17214529	True	NA	NA	False	NA	NA	NA	17215387	17218826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17217452
transcript_69439.nnic	chr19	+	652	5	NIC	ENSG00000053501.14	novel	637	7	NA	NA	-8	1	combination_of_known_splicesites	FALSE	canonical	0	0	junction_4	46.4993279521328	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGTCTTCCGTCTGTCCC	17215325	False	NA	10	True	AATAAA	-17	NA	17215337	17219830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17215508_17215801_17215852_17215991_17216071_17216168_17216322_17219630
transcript_69447.known	chr19	+	575	4	FSM	ENSG00000053501.14	ENST00000601592.5	575	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	23.3285709425636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGGCCAGCTGACTAGGA	17214533	True	NA	NA	False	NA	NA	NA	17215391	17217489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215801_17216071_17216168_17216322_17217452
transcript_69449.known	chr19	+	559	4	FSM	ENSG00000053501.14	ENST00000601662.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	42.9185274677499	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATGGCCCCGAGAGGAAACA	17214487	True	NA	NA	False	NA	NA	NA	17215345	17217617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17215508_17215991_17216071_17216168_17216322_17217452
transcript_69450.nic	chr19	+	705	4	ISM	ENSG00000053501.14	ENST00000595101.5	1776	5	310	1055	-22	101	3prime_fragment	FALSE	canonical	3	51	junction_3	29.8030572630095	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCAGTGCCACGTGTCTGTA	17214839	False	NA	NA	False	AATACA	-14	NA	17215697	17217771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_17215852_17215991_17216071_17216168_17216322_17217452
transcript_69454.known	chr19	+	1111	6	FSM	ENSG00000099330.9	ENST00000215061.9	1111	6	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	39.5848455851479	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17224459	True	NA	18	True	AATAAA	-18	NA	17226225	17229219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_69455.known	chr19	+	878	6	FSM	ENSG00000099330.9	ENST00000600232.5	878	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	60.081944043115	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAGTATAATTACTTAACA	17224486	False	NA	18	True	AATAAA	-18	NA	17226252	17229219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17229008
transcript_69458.known	chr19	+	942	5	FSM	ENSG00000099330.9	ENST00000601529.5	942	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	50.9429828337525	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224458	True	NA	14	True	AATAAA	-14	NA	17226224	17229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17226317_17226692_17226870_17226993_17227200_17228255_17228310_17228802
transcript_6946.nic	chr1	-	898	4	NIC	ENSG00000225087.2	novel	1020	3	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	6.53197264742181	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCATATGGATCTTGTCT	-72898718	True	NA	NA	False	ATTAAA	-21	NA	72899263	72784010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_72784506_72850749_72850801_72898766_72898884_72899028
transcript_69460.known	chr19	+	1201	5	FSM	ENSG00000099330.9	ENST00000594283.5	1201	5	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_1	37.9275625370258	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTATTAGACACCTACTG	17224476	True	NA	1	True	AATAAA	-1	NA	17226242	17229202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17228802
transcript_69461.nic	chr19	+	1069	5	NIC	ENSG00000099330.9	novel	878	6	NA	NA	-28	0	intron_retention	FALSE	canonical	3	41	junction_4	66.3814733189917	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	NA	False	NA	17	True	AATAAA	-17	NA	17226184	17229218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17226317_17226692_17227200_17227839_17228006_17228255_17228310_17229008
transcript_69462.nnic	chr19	+	953	5	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	-10	0	intron_retention	FALSE	canonical	2	5	junction_1	79.3489130360335	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224436	True	NA	14	True	AATAAA	-14	NA	17226202	17229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17226317_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_69464.nnic	chr19	+	985	5	NIC	ENSG00000099330.9	novel	1111	6	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	81.4535910810567	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224441	True	NA	14	True	AATAAA	-14	NA	17226207	17229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17226354_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_69468.known	chr19	+	1044	5	FSM	ENSG00000099330.9	ENST00000597836.5	1044	5	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	35.6966384972031	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGAAGTAGGGCCTGCTCTC	17225672	True	NA	-36	True	NA	NA	NA	17226614	17229165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17226870_17226993_17227200_17227839_17228006_17228255_17228310_17228802
transcript_69478.nic	chr19	+	1257	4	ISM	ENSG00000099330.9	ENST00000594283.5	1201	5	333	-13	-39	0	3prime_fragment	FALSE	canonical	3	153	junction_3	21.7715410570772	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17226524	True	NA	14	True	AATAAA	-14	NA	17226575	17229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_17227200_17227839_17228006_17228255_17228310_17228802
transcript_69479.nic	chr19	+	1054	4	NIC	ENSG00000099330.9	novel	878	6	NA	NA	-39	0	intron_retention	FALSE	canonical	3	41	junction_3	74.1724716829334	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	17226524	True	NA	17	True	AATAAA	-17	NA	17226575	17229218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17227200_17227839_17228006_17228255_17228310_17229008
transcript_69480.nnic	chr19	+	580	3	NIC	ENSG00000099330.9	novel	942	5	NA	NA	-9	0	intron_retention	FALSE	canonical	1	1	junction_1	76	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17224437	True	NA	14	True	AATAAA	-14	NA	17226203	17229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17226317_17228255_17228310_17228802
transcript_69482.nic	chr19	+	1091	3	NIC	ENSG00000099330.9	novel	942	5	NA	NA	-39	0	intron_retention	FALSE	canonical	3	14	junction_1	69.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACTGAGTATAATTACTT	17226524	True	NA	14	True	AATAAA	-14	NA	17226575	17229215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17227200_17228255_17228310_17228802
transcript_69483.known	chr19	+	421	3	FSM	ENSG00000099330.9	ENST00000599286.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGAGTATAATTACTTAAC	17226100	False	NA	17	True	AATAAA	-17	NA	17227042	17229218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17227200_17228255_17228310_17229008
transcript_69485.known	chr19	-	3289	13	FSM	ENSG00000130307.12	ENST00000252597.8	3289	13	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	8.1967981553775	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGGAGACTGAAGCTGGA	-17263841	True	NA	-12	True	AATAAA	-28	NA	17264745	17249170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17250415_17251581_17251705_17251910_17252018_17255384_17255607_17256470_17256721_17258211_17258386_17259288_17259430_17259595_17259733_17259896_17260023_17262551_17262991_17264001_17264151_17264245_17264348_17264670
transcript_69500.known	chr19	+	1366	9	FSM	ENSG00000105393.16	ENST00000601043.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	356.554256039666	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250566	True	NA	16	True	AATAAA	-18	NA	17267442	17279337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17267517_17268793_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_69526.known	chr19	+	930	6	FSM	ENSG00000105393.16	ENST00000447614.6	930	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_3	436.179596038146	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCATCCCTGTACATCTGCA	17250499	True	NA	NA	False	NA	NA	NA	17267375	17279048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17267528_17268793_17269092_17271596_17271656_17276494_17276625_17276822_17276910_17278844
transcript_69536.known	chr19	-	2383	4	FSM	ENSG00000160113.6	ENST00000291442.4	2383	4	0	0	0	0	multi-exon	FALSE	canonical	3	546	junction_3	252.021604012213	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCCCTGGTCTTTATTTT	-17242573	True	NA	-5	True	AATAAA	-20	NA	17245919	17231882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17232627_17235498_17236066_17240670_17240766_17244942
transcript_69537.known	chr19	+	1472	9	FSM	ENSG00000105393.16	ENST00000359435.8	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_1	283.316491533762	2158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGAAGTCCACGCCAATCAC	17250509	True	NA	16	True	AATAAA	-18	NA	17267385	17279337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17267528_17268755_17269092_17271596_17271656_17273903_17274025_17274106_17274186_17275800_17275826_17276494_17276625_17276822_17276910_17278844
transcript_6954.known	chr1	-	1020	3	FSM	ENSG00000225087.2	ENST00000656766.1	1020	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCATATGGATCTTGTCT	-72898695	True	NA	NA	False	ATTAAA	-21	NA	72899240	72784010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_72784506_72850749_72850801_72898766
transcript_69541.known	chr19	+	4043	5	FSM	ENSG00000130311.11	ENST00000359866.9	4043	5	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_1	19.1229574072631	715	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATCGCCTGTTCTGTGTGT	17300757	True	NA	5	True	AATAAA	-16	NA	17309562	17323298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17309658_17314022_17314104_17314337_17314390_17315933_17315996_17319545
transcript_69546.known	chr19	+	793	4	FSM	ENSG00000130312.7	ENST00000600434.5	793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	431.572576618219	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTTTTTAATTAGGAAG	17290872	True	NA	NA	False	NA	NA	NA	17292632	17306543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17292855_17298311_17298378_17305830_17305958_17306165
transcript_6955.nnic	chr1	-	714	3	NNC	ENSG00000225087.2	novel	1020	3	NA	NA	-39	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCATATGGATCTTGTCT	-72898734	True	NA	NA	False	ATTAAA	-21	NA	72899279	72784010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_72784506_72850749_72850801_72899111
transcript_69554.known	chr19	+	863	3	FSM	ENSG00000130312.7	ENST00000595444.1	863	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	438	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATCCTGAGTTCTTTTG	17290848	True	NA	NA	False	NA	NA	NA	17292608	17306655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17292855_17305830_17305958_17306165
transcript_69560.known	chr19	-	2042	5	FSM	ENSG00000127220.6	ENST00000247706.4	2042	5	0	0	0	0	multi-exon	FALSE	canonical	3	115	junction_1	18.1727818453862	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCCGGACCTGTGCTGGG	-17302010	True	NA	-2	True	AATAAA	-18	NA	17303425	17292130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17292832_17294287_17294505_17294674_17294846_17300855_17301625_17303241
transcript_69562.known	chr19	+	764	2	FSM	ENSG00000130312.7	ENST00000252602.2	764	2	0	0	0	0	multi-exon	FALSE	canonical	3	917	junction_1	0	7102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATATGTGTCATAACTCT	17295998	True	NA	24	True	AATAAA	-20	NA	17305871	17306843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17305958_17306165
transcript_69563.known	chr19	+	2566	9	FSM	ENSG00000130299.17	ENST00000324894.13	2566	9	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_1	35.7351367704113	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATTGTCATTTCTTTTTA	17332025	True	NA	32	True	TATAAA	-23	NA	17337552	17342731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341043_17341323_17341477
transcript_69565.known	chr19	+	2493	9	FSM	ENSG00000130299.17	ENST00000600625.5	2493	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_7	77.9870782565933	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCTCTACAAATTGTCATT	17332027	True	NA	24	True	TATAAA	-15	NA	17337554	17342723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17337665_17338007_17338256_17338364_17338452_17338538_17338742_17338953_17339027_17339122_17339267_17339433_17339600_17341106_17341323_17341477
transcript_69567.known	chr19	-	1001	5	FSM	ENSG00000130303.14	ENST00000252593.7	1001	5	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	35.3624094201738	1392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398825	True	NA	-6	True	AATAAA	-29	NA	17405630	17402938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17404370_17404438_17405290
transcript_69568.known	chr19	-	879	4	FSM	ENSG00000130303.14	ENST00000527220.2	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	211.472614460281	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTCGAGTTCCTGGAGTAT	-17398770	True	NA	-6	True	AATAAA	-29	NA	17405575	17402938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17403327_17403679_17403825_17404128_17404190_17405290
transcript_69575.known	chr19	+	563	5	FSM	ENSG00000282851.2	ENST00000634577.1	563	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.74165738677394	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTTAACCCACTGCAGA	17405705	True	NA	NA	False	NA	NA	NA	17405823	17414468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405996_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_69577.known	chr19	+	1633	5	FSM	ENSG00000282851.2	ENST00000647283.1	1633	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.09267638593623	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTCTCTTGGCTGCCGG	17405630	True	NA	NA	False	AGTAAA	-42	NA	17405748	17415687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405772_17406076_17406297_17413096_17413105_17413220_17413306_17414390
transcript_69578.known	chr19	+	1269	4	FSM	ENSG00000282851.2	ENST00000635435.2	1269	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.39934634239519	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCAAAACCCTGCCTGTAC	17405644	True	NA	NA	False	NA	NA	NA	17405762	17415005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17405988_17406076_17406297_17413096_17413306_17414390
transcript_69583.known	chr19	+	1250	9	FSM	ENSG00000141971.13	ENST00000317040.12	1250	9	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	39.3215907613108	1369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGGAGTCCTGATCCTGC	17415043	True	NA	11	True	AATAAA	-19	NA	17420046	17425332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331_17422459_17423497_17423618_17423692_17423800_17424005_17424068_17424620_17424678_17424930
transcript_69584.known	chr19	+	934	4	FSM	ENSG00000141971.13	ENST00000526234.1	934	4	0	0	0	0	multi-exon	FALSE	canonical	3	331	junction_3	52.3641098463442	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAAAATAAAGTAGAC	17415118	True	NA	-19	True	AATAAA	-7	NA	17420121	17422965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17420226_17420312_17420412_17420537_17420635_17422331
transcript_69589.known	chr19	+	1008	5	FSM	ENSG00000130313.7	ENST00000252603.7	1008	5	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_2	22.8076193409132	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17501939	True	NA	9	True	ATTAAA	-17	NA	17511648	17521288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17511961_17516172_17516281_17517287_17517390_17517709_17517851_17520943
transcript_69590.nic	chr19	+	1391	5	NIC	ENSG00000130313.7	novel	869	4	NA	NA	409	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	167.159355107634	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCACTGTCTCGCGGTG	17512263	False	NA	9	True	ATTAAA	-17	NA	17512273	17521288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17512969_17516172_17516281_17517287_17517390_17517709_17517851_17520943
transcript_69596.nnic	chr19	-	1047	2	NNC	ENSG00000269439.7	novel	775	3	NA	NA	21726	2705	intron_retention	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATCCTCCTTTCTGTCCC	-17489050	True	NA	NA	False	NA	NA	NA	17489124	17486284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_17487197_17488989
transcript_69597.known	chr19	-	313	2	FSM	ENSG00000269439.7	ENST00000595116.2	359	2	46	0	7	0	multi-exon	FALSE	canonical	3	8	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCTCATTCATTTGCA	-17511341	True	NA	NA	False	AATAAA	-35	NA	17511468	17503435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_17503623_17511342
transcript_69600.known	chr19	+	3288	7	FSM	ENSG00000130479.11	ENST00000324096.9	3288	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	232.514814342848	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCCTCTCTTCTTTC	17708509	True	NA	21	True	AATAAA	-16	NA	17719479	17734513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17719621_17720935_17721038_17724125_17724209_17725048_17725190_17725828_17728173_17733192_17733429_17734272
transcript_69606.nic	chr19	+	1766	10	ISM	ENSG00000130475.15	ENST00000597512.1	2934	25	15710	-19	-28	0	3prime_fragment	TRUE	canonical	3	158	junction_5	11.8081369726741	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	NA	False	NA	9	True	AATAAA	-33	NA	17778412	17788557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_69612.nic	chr19	+	1613	9	NIC	ENSG00000130475.15	novel	2934	25	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	1	8	junction_1	57.6866535690882	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	17777429	True	NA	9	True	AATAAA	-33	NA	17778452	17788557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_17778885_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788283
transcript_69616.known	chr19	+	3214	29	FSM	ENSG00000130475.15	ENST00000594202.5	3214	29	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	59.4101533959525	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTCCTGCTCCAGGAAG	17746521	True	NA	9	True	AATAAA	-33	NA	17747717	17788557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17747815_17754316_17754362_17754591_17754686_17755121_17755192_17762761_17762854_17764374_17764450_17766668_17766811_17770424_17770578_17770791_17770897_17772456_17772556_17772644_17772742_17774238_17774284_17774393_17774479_17775055_17775081_17775455_17775514_17775982_17776162_17776246_17776272_17776634_17776687_17778136_17778229_17778608_17778885_17781230_17781344_17781451_17781540_17781711_17781821_17783016_17783173_17784102_17784236_17784724_17784925_17786573_17786630_17787681_17787847_17788269
transcript_69617.known	chr19	+	2692	3	FSM	ENSG00000179913.11	ENST00000318683.7	2692	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCCCACAGACAGATTCTT	17794990	True	NA	NA	False	NA	NA	NA	17795137	17813576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17795207_17807757_17808375_17811570
transcript_69619.nnic	chr19	-	992	3	Fusion	ENSG00000248099.4_ENSG00000105639.20	novel	899	3	NA	NA	-9263	0	multi-exon	FALSE	canonical	2	4	junction_1	8	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCCTGCATTTTCTCTAG	NA	False	NA	-2	True	AATAAA	-13	NA	17830837	17816513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_17817060_17830107_17830219_17830502
transcript_69635.known	chr19	+	683	5	FSM	ENSG00000105640.13	ENST00000597648.5	683	5	0	0	0	0	multi-exon	FALSE	canonical	1	781	junction_1	9457.85420629331	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCCAACACCTTCTTCTAG	17860042	False	NA	-66	True	NA	NA	NA	17860124	17863243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17860315_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_69638.known	chr19	+	634	5	FSM	ENSG00000105640.13	ENST00000222247.10	634	5	0	0	0	0	multi-exon	TRUE	canonical	3	17527	junction_1	2235.3392779397	351649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGCATGTTTTCTTTGCAC	17852460	True	NA	10	True	AATAAA	-22	NA	17859909	17863319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17859975_17861292_17861473_17862093_17862224_17862917_17863028_17863170
transcript_69639.known	chr19	+	491	6	FSM	ENSG00000105640.13	ENST00000599898.5	491	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	8761.47313184261	5106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGCATGTTTTCTTT	17852482	False	NA	6	True	AATAAA	-18	NA	17859931	17863315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17859975_17861292_17861308_17861424_17861473_17862093_17862224_17862917_17863028_17863170
transcript_69640.known	chr19	+	907	2	FSM	ENSG00000105640.13	ENST00000602216.1	907	2	0	0	0	0	multi-exon	FALSE	canonical	3	17527	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGGGAATACCGGGACCTGAC	17852503	False	NA	NA	False	NA	NA	NA	17859952	17862177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17859975_17861292
transcript_69641.known	chr19	+	954	2	FSM	ENSG00000105640.13	ENST00000600238.1	954	2	0	0	0	0	multi-exon	FALSE	canonical	3	22372	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCACAGACCGAGACAT	17861250	False	NA	NA	False	NA	NA	NA	17861332	17862907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17861473_17862093
transcript_6965.nnic	chr1	-	1452	2	NNC	ENSG00000225087.2	novel	1122	5	NA	NA	0	-107321	intron_retention	FALSE	canonical	3	5	junction_1	0	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTCAAGGCCTTTATTAA	-72898695	True	NA	NA	False	AATAAA	-16	NA	72899240	72891331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_72892310_72898766
transcript_69650.known	chr19	+	987	5	FSM	ENSG00000007080.11	ENST00000445755.7	987	5	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_1	481.378229669768	7020	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAAGCCTAAGTGAGTGG	17910295	True	NA	19	True	AATAAA	-27	NA	17933014	17943985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17933049_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_69664.known	chr19	+	609	2	FSM	ENSG00000007080.11	ENST00000602080.1	609	2	0	0	0	0	multi-exon	FALSE	canonical	3	1129	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGGCTGGGCAGAGTG	17910303	True	NA	NA	False	NA	NA	NA	17933022	17936992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17933049_17936409
transcript_69665.known	chr19	+	1055	5	FSM	ENSG00000007080.11	ENST00000597436.5	1055	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	953.586486638732	2238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTAAGTGAGTGGGTGGGG	17934965	True	NA	25	True	AATAAA	-33	NA	17935095	17943991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17935192_17936409_17936580_17942655_17942846_17943260_17943376_17943507
transcript_69667.known	chr19	+	247	2	FSM	ENSG00000105642.16	ENST00000594192.2	247	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGCGAGGAGACCCCTGC	17952003	False	NA	NA	False	NA	NA	NA	17952184	17954653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_17952339_17954560
transcript_6967.nnic	chr1	-	1024	2	NNC	ENSG00000225087.2	novel	1122	5	NA	NA	0	-107749	intron_retention	FALSE	canonical	3	5	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTTTTATTTATCCTA	-72898695	True	NA	NA	False	ATTAAA	-15	NA	72899240	72891759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_72892310_72898766
transcript_69671.known	chr19	+	988	7	FSM	ENSG00000216490.4	ENST00000407280.4	988	7	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_5	20.8619803044251	763	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTCTGGATGGTGTAATTA	18171464	True	NA	NA	False	AGTAAA	-16	NA	18173812	18178117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18173974_18175039_18175223_18175310_18175386_18175604_18175698_18177139_18177293_18177710_18177765_18177848
transcript_69676.known	chr19	+	1578	5	FSM	ENSG00000254858.10	ENST00000599612.3	1578	5	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_3	19.3697573552174	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCCCCCACCAAAAGAGAAAA	18189130	True	NA	NA	False	NA	NA	NA	18193217	18196948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18193469_18193863_18194035_18194776_18194854_18194957_18195087_18195998
transcript_69680.known	chr19	-	1496	5	FSM	ENSG00000105649.10	ENST00000222256.9	1496	5	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_2	7.94905654779232	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCGGGTCCTGCCCACCC	-18202613	True	NA	-8	True	AATAAA	-32	NA	18204042	18196783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18202512_18202741_18203895
transcript_69683.known	chr19	-	1253	4	FSM	ENSG00000105649.10	ENST00000464076.3	1253	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	45.73352769638	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGTCCCTGTGAGCACC	-18202613	True	NA	-23	True	AATAAA	-17	NA	18204042	18196798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18197661_18198724_18198850_18200326_18200446_18203895
transcript_69685.known	chr19	+	1676	3	FSM	ENSG00000254858.10	ENST00000532896.5	1676	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTGGATGATCAAAACC	18189144	True	NA	6	True	AATAAA	-16	NA	18193231	18196742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18194035_18194957_18195087_18195998
transcript_69689.nnic	chr19	-	776	5	NNC	ENSG00000284797.1	novel	908	4	NA	NA	-101	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.06155281280883	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGGCCTCGTGTGAAAA	NA	False	NA	NA	False	AATAAA	-15	NA	18255520	18250038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_18250178_18250311_18250473_18252063_18252162_18253895_18253973_18255219
transcript_6969.nic	chr1	-	444	2	ISM	ENSG00000225087.2	ENST00000445976.1	499	5	-123	149754	-23	-114664	5prime_fragment	FALSE	canonical	3	16	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCCCAGTGGTCTCTTTTT	-72898718	True	NA	NA	False	AATAAA	-20	NA	72899263	72898674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_72898884_72899028
transcript_69690.known	chr19	-	619	4	FSM	ENSG00000284797.1	ENST00000596647.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	3.2659863237109	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTGGGGACCATGTCTTT	-18255321	True	NA	NA	False	AAAACA	-43	NA	18255351	18249949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18250178_18250311_18250473_18252063_18252162_18255219
transcript_69692.known	chr19	+	415	3	FSM	ENSG00000268650.3	ENST00000599416.2	415	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACTGGTGCATAGGTTCAA	18204654	True	NA	NA	False	AATAAA	-15	NA	18204733	18209046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18204900_18208289_18208430_18208937
transcript_69694.known	chr19	+	267	2	FSM	ENSG00000268650.3	ENST00000596473.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCATTCTCCCTGCCCTC	18204661	True	NA	0	True	AATAAA	-12	NA	18204740	18205563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18204900_18205455
transcript_69695.known	chr19	-	2542	15	FSM	ENSG00000105650.22	ENST00000447275.7	2542	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	4.91353814911995	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGTGCCAGCTTTCTGCC	-18224445	True	NA	-9	True	NA	NA	NA	18224493	18210542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18211277_18211758_18211942_18213367_18213491_18216740_18216896_18218148_18218249_18218333_18218499_18218939_18219039_18219233_18219398_18220225_18220320_18220402_18220516_18220873_18220924_18221104_18221179_18221260_18221298_18222131_18222324_18224234
transcript_69706.known	chr19	-	1704	5	FSM	ENSG00000130520.11	ENST00000593829.6	1704	5	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_4	489.804744260404	5408	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTTTTCTTGAGTCTTCA	-18273714	True	NA	-6	True	AATAAA	-20	NA	18323076	18306235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18316023_18316066_18323017
transcript_69707.known	chr19	-	986	4	FSM	ENSG00000130520.11	ENST00000252816.10	986	4	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_3	2212.99179091714	3000	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCACTGTTCCTTTTGAGCT	-18273709	True	NA	-9	True	AATAAA	-26	NA	18323071	18306906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18307556_18309677_18309862_18312603_18312703_18323017
transcript_69708.known	chr19	-	1113	6	FSM	ENSG00000130520.11	ENST00000600289.6	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	38	junction_2	2220.76379653488	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGCACATCCACTGTTCC	-18273698	True	NA	-18	True	AATAAA	-17	NA	18323060	18306915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18307556_18309677_18309862_18310109_18310215_18312603_18312703_18316023_18316066_18323017
transcript_69709.known	chr19	-	807	4	FSM	ENSG00000130520.11	ENST00000594828.7	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	3870	junction_3	557.795661510557	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCCAGGGGCCATCTGTAG	-18273750	True	NA	NA	False	CATAAA	-14	NA	18323112	18309290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18309862_18312603_18312703_18316023_18316066_18323017
transcript_69711.nic	chr19	+	843	6	NIC	ENSG00000130517.14	novel	1237	6	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	14.2744527040444	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACATTTCCTGTGTGTCC	18337873	True	NA	14	True	AATAAA	-15	NA	18340583	18369948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18358005_18358071_18369705
transcript_69719.known	chr19	+	7081	5	FSM	ENSG00000130517.14	ENST00000269919.11	7081	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	6.60965203320114	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	18337887	True	NA	16	True	AATAAA	-17	NA	18340597	18369950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18363390
transcript_6972.nnic	chr1	-	659	3	Intergenic	novelGene_3	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	4	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTCTATTTATTTA	-72985279	False	NA	-1	True	AATAAA	-22	NA	72985313	72965144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr1_-_72965311_72969291_72969364_72984892
transcript_69721.nic	chr19	+	760	5	NIC	ENSG00000130517.14	novel	7081	5	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	8.67467578644874	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAACACTTGAAATACGCA	18337873	True	NA	-4	True	GGGGCT	-42	NA	18340583	18369930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18357382_18357616_18369705
transcript_69723.nnic	chr19	+	923	5	NNC	ENSG00000130517.14	novel	7081	5	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.6589889011722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	18337873	True	NA	16	True	AATAAA	-17	NA	18340583	18369950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_18340716_18342858_18342912_18355894_18356012_18363390_18363767_18369705
transcript_6973.nnic	chr1	-	425	3	Intergenic	novelGene_1	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTCTATTTATTTA	-72985260	False	NA	-1	True	AATAAA	-22	NA	72985294	72965144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr1_-_72965311_72969291_72969364_72985107
transcript_69730.known	chr19	+	545	4	FSM	ENSG00000130517.14	ENST00000597431.2	545	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	6.68331255192114	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCGATCTGGAAGAGAGATTC	18337928	True	NA	NA	False	NA	NA	NA	18340638	18363688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18340716_18342858_18342912_18355894_18356012_18363390
transcript_69731.nnic	chr19	+	547	4	NIC	ENSG00000130517.14	novel	7081	5	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_3	13.1233464566864	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTCCTGTGTGTCCTT	18337873	True	NA	16	True	AATAAA	-17	NA	18340583	18369950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_18340716_18342858_18342912_18355894_18356012_18369705
transcript_69735.known	chr19	+	1200	2	FSM	ENSG00000130513.7	ENST00000252809.3	1200	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGTGTCCAGGATAA	18385666	True	NA	20	True	AATAAA	-16	NA	18386157	18389176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18386467_18388285
transcript_69739.known	chr19	-	2252	11	FSM	ENSG00000105655.19	ENST00000338128.13	2252	11	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_8	144.969651996547	342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	-18425102	True	NA	-18	True	AATAAA	-13	NA	18438133	18434387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_69742.known	chr19	-	1703	10	FSM	ENSG00000105655.19	ENST00000457269.8	1703	10	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_8	264.079299724931	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGGGTTCTTGGGGCCTG	-18425136	True	NA	-35	True	AATAAA	-27	NA	18438167	18434808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18436972_18437106_18437859_18437989_18438092
transcript_69745.known	chr19	-	1654	10	FSM	ENSG00000105655.19	ENST00000582770.6	1654	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	287.915496862071	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18425131	True	NA	-47	True	AATAAA	-15	NA	18438162	18434820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436972_18437106_18437598_18437761_18437859_18437989_18438092
transcript_69747.known	chr19	-	1466	9	FSM	ENSG00000105655.19	ENST00000577820.5	1466	9	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	282.860141014955	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCTTGAAGGCCCCCACA	-18425084	True	NA	-87	True	NA	NA	NA	18438115	18434860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859_18437989_18438092
transcript_69753.known	chr19	-	2039	8	FSM	ENSG00000105655.19	ENST00000582811.6	2039	8	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_7	296.346529094104	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCGTGTGGGGCCTCCCAG	-18425080	True	NA	-18	True	AATAAA	-13	NA	18438111	18434387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18436683_18436878_18437859
transcript_69755.nnic	chr19	-	1376	8	NIC	ENSG00000105655.19	novel	1654	10	NA	NA	-12	0	combination_of_known_splicesites	FALSE	canonical	3	102	junction_6	292.282502426146	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18425148	True	NA	-47	True	AATAAA	-15	NA	18438179	18434820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18436480_18437859_18437989_18438092
transcript_69758.known	chr19	+	793	3	FSM	ENSG00000130511.16	ENST00000599699.2	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	364	junction_2	37.5	864	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCAGATTCCCTCT	18433259	True	NA	26	True	AATAAA	-26	NA	18433274	18434562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18433614_18433709_18433818_18434216
transcript_69759.known	chr19	-	696	3	FSM	ENSG00000105655.19	ENST00000582287.6	696	3	0	0	0	0	multi-exon	FALSE	canonical	3	969	junction_2	10	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCACCTGGGGTTCTTGG	-18435726	False	NA	-41	True	AATAAA	-21	NA	18435737	18434814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562
transcript_69760.known	chr19	-	793	4	FSM	ENSG00000105655.19	ENST00000581672.5	793	4	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_1	417.79660123079	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCCTTCCACCTGGGGT	-18435891	False	NA	-47	True	AATAAA	-15	NA	18435902	18434820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435247_18435484_18435562_18435677_18435756
transcript_69761.known	chr19	-	2148	9	FSM	ENSG00000105655.19	ENST00000577916.6	2148	9	0	0	0	0	multi-exon	FALSE	canonical	3	603	junction_6	153.496742636448	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCTCCTTCCACCTGGGG	-18425133	True	NA	-48	True	AATAAA	-14	NA	18438164	18434821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18435118_18435265_18435484_18435562_18435677_18435756_18435922_18436031_18436248_18436329_18437106_18437598_18437761_18437859_18437989_18438092
transcript_69762.known	chr19	-	3970	12	FSM	ENSG00000105656.13	ENST00000262809.9	3970	12	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	13.00349603341	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCAGCCCAGGCTGCCT	-18519901	True	NA	2	True	AATAAA	-16	NA	18522070	18442662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18444869_18445223_18445269_18446308_18446481_18446747_18446815_18450476_18450976_18451551_18451649_18458204_18458330_18461577_18461853_18465411_18465576_18465796_18465919_18472834_18472883_18521920
transcript_69764.known	chr19	-	623	2	FSM	ENSG00000105656.13	ENST00000596915.1	623	2	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAACTGCGCATGCCAGGGA	-18519898	True	NA	NA	False	NA	NA	NA	18522067	18472406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18472883_18521920
transcript_6977.nnic	chr1	-	568	2	Intergenic	novelGene_2	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGTTTTCTATTTATTTA	-72985260	False	NA	-1	True	AATAAA	-22	NA	72985294	72965144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr1_-_72965311_72984892
transcript_69771.known	chr19	-	1756	9	FSM	ENSG00000105701.16	ENST00000596558.6	1756	9	0	0	0	0	multi-exon	FALSE	canonical	3	880	junction_8	957.990442280089	1181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	-18542946	False	NA	-9	True	AATAAA	-17	NA	18542972	18531761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18542887
transcript_69788.known	chr19	-	1781	9	FSM	ENSG00000105701.16	ENST00000597960.7	1781	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1122.13042356938	2793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGAGCTTTCTTCTCCCG	-18519100	True	NA	2	True	AATAAA	-28	NA	18543577	18531750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538437_18539370_18539460_18539550_18539721_18541678_18541996_18543481
transcript_69789.known	chr19	-	1292	6	FSM	ENSG00000105701.16	ENST00000544835.7	1292	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1697.83773076228	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGAGCTTTCTTCTCCC	-18519096	True	NA	1	True	AATAAA	-27	NA	18543573	18531751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18541678_18541996_18543485
transcript_69790.known	chr19	-	1710	9	FSM	ENSG00000105701.16	ENST00000222308.8	1710	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1184.99818037835	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCACGGACTCCTGAGCT	-18519047	True	NA	-9	True	AATAAA	-17	NA	18543524	18531761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18532256_18532663_18532796_18533269_18533348_18537600_18537774_18538215_18538434_18539370_18539460_18539550_18539721_18541678_18541996_18543485
transcript_69798.known	chr19	+	656	6	FSM	ENSG00000105700.11	ENST00000600372.5	656	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	437.150042891454	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATGTGACACCAGCCCCG	18538540	True	NA	NA	False	NA	NA	NA	18557805	18568495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557915_18560419_18560551_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_69808.known	chr19	+	1496	5	FSM	ENSG00000105700.11	ENST00000539106.5	1496	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	390.786706529278	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGGCTTCTTCAGTCCT	18538496	True	NA	46	True	AATAAA	-36	NA	18557761	18569387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557950_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_69810.known	chr19	+	635	5	FSM	ENSG00000105700.11	ENST00000597438.5	635	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	394.248969561114	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGACGAGGAGATGAC	18539388	False	NA	NA	False	NA	NA	NA	18558653	18568601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18558767_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_69811.known	chr19	+	1344	5	FSM	ENSG00000105700.11	ENST00000222307.9	1344	5	0	0	0	0	multi-exon	FALSE	canonical	3	676	junction_1	102.558215175577	1657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACACCTAGCTGTGGCTTC	18538604	True	NA	37	True	AATAAA	-27	NA	18557869	18569378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18567131_18567179_18568401
transcript_69812.known	chr19	+	1327	6	FSM	ENSG00000105700.11	ENST00000601630.5	1327	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	415.000048192768	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACCCGATGTTTACAGATG	18538610	True	NA	-31	True	NA	NA	NA	18557875	18569310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18557915_18562035_18562158_18564868_18565022_18565133_18565191_18567131_18567179_18568401
transcript_69813.known	chr19	+	517	3	FSM	ENSG00000105700.11	ENST00000600099.1	517	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	451	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGTTCTGTCATCCAGGG	18562052	False	NA	NA	False	NA	NA	NA	18562090	18568698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18562158_18564868_18565022_18568401
transcript_69814.known	chr19	+	764	6	FSM	ENSG00000221983.8	ENST00000596273.5	764	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2895.88842326496	2347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGAGCAGCAATTGGTGTC	18450214	True	NA	27	True	AATAAA	-17	NA	18571854	18575229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571888_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69815.known	chr19	+	779	6	FSM	ENSG00000221983.8	ENST00000595683.5	779	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2894.67223705897	3100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTCCTCATGGCTGATC	18450234	True	NA	40	True	AATAAA	-30	NA	18571874	18575242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571910_18572350_18572608_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_6982.known	chr1	+	1195	5	FSM	ENSG00000259030.8	ENST00000370893.1	1195	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	22.0383189014044	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATTGTCAAGCCAAATT	74197454	True	NA	NA	False	AATAAA	-23	NA	74198263	74240683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74236101_74236211_74239955
transcript_69821.known	chr19	+	554	5	FSM	ENSG00000221983.8	ENST00000596304.5	554	5	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	2555.1643293534	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTCAATAAAGTGTCCCTT	18571713	False	NA	0	True	NA	NA	NA	18571729	18575202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571837_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69822.known	chr19	+	668	5	FSM	ENSG00000221983.8	ENST00000598780.5	668	5	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_1	2504.94764166838	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCCTCCTGCCCAGGCCC	18571915	False	NA	-32	True	NA	NA	NA	18571926	18575170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18572180_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69824.known	chr19	+	743	5	FSM	ENSG00000221983.8	ENST00000595158.5	743	5	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_1	2508.80982738828	5174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCAATTGGTGTCCTCAT	18450241	True	NA	32	True	AATAAA	-22	NA	18571881	18575234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18572146_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69829.known	chr19	+	702	5	FSM	ENSG00000006015.18	ENST00000450195.6	702	5	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_2	216.607363679077	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18581592	True	NA	10	True	AATAAA	-16	NA	18588795	18592336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589078_18589478_18589684_18590853_18590934_18592107
transcript_69836.known	chr19	+	491	4	FSM	ENSG00000006015.18	ENST00000601736.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_2	270.591122462574	866	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCGCTCTGCCATCTCTGT	18581598	True	NA	10	True	AATAAA	-16	NA	18588801	18592336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589078_18590853_18590934_18592107
transcript_69837.known	chr19	+	1081	4	FSM	ENSG00000006015.18	ENST00000597371.1	1081	4	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_2	34.9221356098901	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTCTGTAGCCGCTCTGC	18581605	True	NA	1	True	AATAAA	-7	NA	18588808	18592327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589684_18590853_18590934_18592107
transcript_6984.known	chr1	+	1426	5	FSM	ENSG00000254685.8	ENST00000534056.5	1426	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	21.5450110234365	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAATAAAAATGGCATACT	74197457	True	NA	NA	False	NA	NA	NA	74198266	74206223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390_74204457_74205218
transcript_69845.known	chr19	-	1741	9	FSM	ENSG00000006016.12	ENST00000392386.8	1741	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_3	26.8744185983623	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-18604926	True	NA	-10	True	AATAAA	-17	NA	18606799	18593236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18593580_18594064_18594108_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_69846.known	chr19	-	1746	9	FSM	ENSG00000006016.12	ENST00000684169.1	1746	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	31.388692231439	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-18604926	True	NA	-10	True	AATAAA	-17	NA	18606799	18593236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18593580_18594064_18594113_18594246_18594435_18596621_18596791_18596891_18597050_18598431_18598602_18598771_18598902_18599564_18599847_18606541
transcript_69850.known	chr19	+	572	5	FSM	ENSG00000221983.8	ENST00000430157.6	572	5	0	0	0	0	multi-exon	FALSE	canonical	3	2550	junction_1	1481.99620444858	40031	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18450161	True	NA	39	True	AATAAA	-29	NA	18571801	18575241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18571888_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69851.known	chr19	+	514	4	FSM	ENSG00000221983.8	ENST00000597451.5	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	5550	junction_3	386.688505130422	11801	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18573253	False	NA	39	True	AATAAA	-29	NA	18573264	18575241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69852.known	chr19	+	707	5	FSM	ENSG00000221983.8	ENST00000599551.5	707	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	2494.64901088309	10558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18572728	False	NA	39	True	AATAAA	-29	NA	18572739	18575241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18572961_18573292_18573404_18573661_18573749_18574869_18574973_18575056
transcript_69853.known	chr19	+	357	4	FSM	ENSG00000221983.8	ENST00000594527.1	357	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	2868.38611223958	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTGTCCTCATGGCTGAT	18573057	True	NA	39	True	AATAAA	-29	NA	18573375	18575241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18573404_18573661_18573749_18574869_18574973_18575102
transcript_69854.known	chr19	+	767	5	FSM	ENSG00000006015.18	ENST00000358607.11	767	5	0	0	0	0	multi-exon	FALSE	canonical	3	378	junction_2	113.789278932595	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCTCTGCCATCTCTGTG	18581594	True	NA	11	True	AATAAA	-17	NA	18588797	18592337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18588901_18588994_18589078_18589412_18589684_18590853_18590934_18592107
transcript_69855.known	chr19	-	413	2	FSM	ENSG00000006016.12	ENST00000596360.1	413	2	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGATTGTGAAGGTGAGTT	-18594124	False	NA	-10	True	AATAAA	-17	NA	18594134	18593236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18593580_18594064
transcript_69858.known	chr19	-	749	5	FSM	ENSG00000223802.9	ENST00000596048.1	749	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	41.4389611356269	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCAAGACTTTTGGCTCGA	NA	False	NA	-9	True	AATAAA	-14	NA	18884233	18877916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18878099_18878929_18879040_18879240_18879389_18880273_18880436_18884086
transcript_6986.known	chr1	+	4692	4	FSM	ENSG00000254685.8	ENST00000370898.9	4692	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	8.16496580927726	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGATACTCTGAAATTGTCA	74197432	True	NA	NA	False	AATAAA	-16	NA	74198241	74208702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74204390
transcript_69861.known	chr19	+	1691	13	FSM	ENSG00000105671.12	ENST00000602113.5	1691	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	45.0527468640925	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCCTCAGTCTGACTTTCG	18917702	True	NA	7	True	AATAAA	-13	NA	18919737	18928622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18919857_18920650_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_69870.known	chr19	-	1607	10	FSM	ENSG00000051128.19	ENST00000542541.6	1607	10	0	0	0	0	multi-exon	FALSE	canonical	1	12	junction_9	98.5169033562951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGGGGCTGGTTTTCTATG	-18937913	False	NA	NA	False	NA	NA	NA	18940304	18929442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18939850
transcript_69871.known	chr19	-	1560	10	FSM	ENSG00000051128.19	ENST00000392351.8	1560	10	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_9	57.8964593045205	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGTGTGTGGTATGT	-18938826	True	NA	-4	True	NA	NA	NA	18941217	18929202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18929635_18931324_18931412_18931508_18931626_18931975_18932133_18932923_18933046_18934302_18934411_18938352_18938485_18938727_18938885_18938968_18939050_18941050
transcript_69888.known	chr19	-	1131	10	FSM	ENSG00000105669.14	ENST00000262812.9	1131	10	0	0	0	0	multi-exon	TRUE	canonical	3	2058	junction_7	215.521131271835	11046	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-18897785	True	NA	-2	True	AATAAA	-29	NA	18919387	18899513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_69889.known	chr19	-	907	9	FSM	ENSG00000105669.14	ENST00000351079.8	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_6	849.074900995195	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACCCCCAGCACCCCCAT	-18897773	True	NA	-61	True	NA	NA	NA	18919375	18899572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18910970_18911072_18912983_18913047_18919222
transcript_6989.known	chr1	+	1380	4	FSM	ENSG00000254685.8	ENST00000370894.9	1380	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.1397466609439	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTAATTCTATTTTTAAT	74197431	True	NA	NA	False	NA	NA	NA	74198240	74206206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74198361_74199663_74199832_74201317_74201411_74205207
transcript_69890.known	chr19	-	948	9	FSM	ENSG00000105669.14	ENST00000349893.8	948	9	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_3	792.144074253541	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATGTGCTCTGGTCAC	-18897761	True	NA	-5	True	AATAAA	-26	NA	18919363	18899516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18904770_18904853_18905575_18905630_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_69891.known	chr19	-	261	2	FSM	ENSG00000105669.14	ENST00000600528.1	261	2	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTGCTCTGGTCACTTT	-18899881	False	43	-2	True	AATAAA	-29	NA	18899937	18899513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899710_18899872
transcript_69892.known	chr19	-	1144	11	FSM	ENSG00000105669.14	ENST00000600932.5	1144	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1049.06484070338	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCCCATCTGTTAATAA	-18897778	True	NA	-51	True	NA	NA	NA	18919380	18899562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18899727_18899872_18899948_18900380_18900450_18903267_18903424_18904770_18904853_18905575_18905630_18905866_18905936_18906959_18907113_18910970_18911072_18912983_18913047_18919222
transcript_69893.known	chr19	+	1793	13	FSM	ENSG00000105671.12	ENST00000247003.9	1793	13	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_12	8.86785706294869	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGACTTTCGAAGAGCAG	18917679	True	NA	15	True	AATAAA	-21	NA	18919714	18928630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18919857_18920579_18920704_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924881_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_69894.known	chr19	+	1882	14	FSM	ENSG00000105671.12	ENST00000595858.5	1882	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	67.9700595415573	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGTCTGACTTTCGAAGA	18917691	True	NA	11	True	AATAAA	-17	NA	18919726	18928626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_18919857_18920579_18920704_18920833_18920910_18921662_18921749_18921842_18921965_18922325_18922514_18922603_18922745_18924232_18924309_18924622_18924700_18924852_18924980_18926302_18926378_18927765_18927855_18927964_18928037_18928127
transcript_69895.known	chr19	-	3640	11	FSM	ENSG00000064607.17	ENST00000337018.10	3640	11	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_10	34.4557687477729	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-19026237	True	NA	-11	True	AATAAA	-16	NA	19033559	18990892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18991150_18994365_18994487_18995143_18995281_19001612_19001675_19004167_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033436
transcript_69898.known	chr19	+	2461	9	FSM	ENSG00000105676.14	ENST00000535612.6	2461	9	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	141.477416484045	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGGTCTCTTCCATAGCT	19030223	True	NA	20	True	AATAAA	-21	NA	19033602	19058176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_69903.known	chr19	+	2383	8	FSM	ENSG00000105676.14	ENST00000392335.6	2383	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	50.079121072029	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTCTCTTCCATAGCTTG	19033542	False	NA	22	True	AATAAA	-23	NA	19033574	19058178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19033931_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_69905.known	chr19	+	2412	8	FSM	ENSG00000105676.14	ENST00000269932.10	2412	8	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	123.618075423575	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTGGGTGAACAGCGGAG	19030230	True	NA	3	True	AATAAA	-4	NA	19033609	19058159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19034014_19042710_19042878_19043991_19044075_19051621_19052196_19054151_19054322_19055264_19055397_19055790_19055929_19057415
transcript_6991.nnic	chr1	+	799	3	NNC	ENSG00000116783.15	novel	656	3	NA	NA	-17847	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	1	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTTATGAGTGTATTTT	74522370	True	NA	NA	False	ATTAAA	-23	NA	74522407	74544428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_74522604_74540233_74540314_74543905
transcript_69913.nnic	chr19	+	1123	5	NNC	ENSG00000105676.14	novel	1252	6	NA	NA	-13	-1568	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_4	172.477534769024	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	19033529	False	NA	NA	False	AATAAA	-14	NA	19033561	19050061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19033931_19034130_19034239_19042710_19042878_19043991_19044075_19049665
transcript_69917.nnic	chr19	+	1005	4	NNC	ENSG00000105676.14	novel	1318	5	NA	NA	-3	-1568	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	191.074738140748	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	19033539	False	NA	NA	False	AATAAA	-14	NA	19033571	19050061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19033931_19042710_19042878_19043991_19044075_19049665
transcript_69919.nnic	chr19	+	801	4	NNC	ENSG00000105676.14	novel	552	5	NA	NA	-2	-1568	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	196.598293199328	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTCTTTTGGTGACTGTC	19033779	True	NA	NA	False	AATAAA	-14	NA	19033858	19050061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19034014_19042710_19042878_19043991_19044075_19049665
transcript_69925.known	chr19	-	536	2	FSM	ENSG00000064607.17	ENST00000597095.5	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGGGGTCTCCATGG	-18991598	False	NA	-11	True	AATAAA	-16	NA	18991618	18990892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18991150_18991339
transcript_69926.known	chr19	-	4169	12	FSM	ENSG00000064607.17	ENST00000594773.5	4169	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_11	205.759950001922	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGGGGTCTCCATGGCTG	-19033619	True	NA	-8	True	AATAAA	-19	NA	19033816	18990889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_18991150_18993647_18993741_18994365_18995281_19001612_19001675_19004167_19004274_19004429_19004647_19008316_19008429_19009854_19010343_19019108_19019230_19024618_19026227_19030950_19031083_19033761
transcript_69928.nic	chr19	+	605	4	NIC	ENSG00000181035.14	novel	3267	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	11.5566238822398	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGCTGGGATGCCAAACAC	19063827	True	NA	NA	False	AATAAA	-18	NA	19063984	19105234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_19064047_19096090_19096206_19101780_19101887_19104912
transcript_69932.nic	chr19	+	1317	2	ISM	ENSG00000181035.14	ENST00000594070.5	1228	5	9528	-394	-392	394	3prime_fragment	FALSE	canonical	3	21	junction_1	0	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAAAAAAAGTGTAAGAATA	19105434	True	NA	NA	False	NA	NA	NA	19105470	19107328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_19105728_19106268
transcript_69939.nic	chr19	-	1716	11	NIC	ENSG00000064545.15	novel	1923	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_10	89.4686537285546	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19138425
transcript_69944.known	chr19	-	1799	10	FSM	ENSG00000064545.15	ENST00000589448.5	1799	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_9	91.9698018071391	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAAATAAAGGAGCATGCC	-19132972	True	NA	-35	True	NA	NA	NA	19138462	19119648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132755_19133129_19133211_19138425
transcript_69950.known	chr19	-	1654	12	FSM	ENSG00000064545.15	ENST00000587583.6	1654	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_8	86.5616867894492	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTCTTCTGAACAAATAA	-19132957	True	NA	-46	True	NA	NA	NA	19138447	19119659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132434_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_69951.known	chr19	-	1754	12	FSM	ENSG00000064545.15	ENST00000587985.6	1754	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.0468197776363	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAGCATGCCGATTTTTAC	-19132972	True	NA	-26	True	NA	NA	NA	19138462	19119639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121317_19121422_19121524_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_69952.known	chr19	-	1923	11	FSM	ENSG00000064545.15	ENST00000587406.5	1923	11	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_10	37.8549864614954	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTCTGAGTGGTTTGGGAC	-19133003	True	NA	-1	True	AATAAA	-25	NA	19138493	19119614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19120184_19120764_19120862_19120991_19121167_19121307_19121669_19121758_19121820_19130155_19130308_19132351_19132509_19132656_19132755_19133129_19133211_19134783_19134888_19138425
transcript_69958.known	chr19	+	1376	10	FSM	ENSG00000064490.14	ENST00000303088.9	1376	10	0	0	0	0	multi-exon	FALSE	canonical	2	33	junction_1	111.279206181546	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192020	True	NA	6	True	AATAAA	-15	NA	19192257	19201866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19192555_19192959_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_69965.known	chr19	+	1212	9	FSM	ENSG00000064490.14	ENST00000407360.7	1212	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	68.7818108223388	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTGGACAGGTGGTGGG	19192608	False	NA	-58	True	NA	NA	NA	19192762	19201802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19193101_19193938_19194134_19196962_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_69967.nic	chr19	+	1308	9	NIC	ENSG00000064490.14	novel	1376	10	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	233	junction_2	43.5423644282209	798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19192490	False	NA	6	True	AATAAA	-15	NA	19192727	19201866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_19193101_19193938_19194134_19196965_19197047_19197185_19197252_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_6997.known	chr1	-	2301	10	FSM	ENSG00000116791.14	ENST00000417775.5	2301	10	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_9	186.153925423606	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACCTGCTTTTCTAGTTT	-74733216	True	NA	-22	True	AATAAA	-15	NA	74733408	74705489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74730381_74730421_74732955
transcript_69972.known	chr19	-	1425	9	FSM	ENSG00000213999.17	ENST00000424583.7	1425	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	10.558616149856	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTGTGACTCGCCTCAT	-19170202	True	NA	-3	True	AATAAA	-26	NA	19170263	19145566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19146023_19146272_19146385_19146554_19146649_19146741_19146876_19147035_19147184_19147697_19147833_19149225_19149430_19150681_19150765_19170204
transcript_69979.known	chr19	+	1059	8	FSM	ENSG00000064490.14	ENST00000392324.8	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	116.70580490258	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGGACTTTGCTGTGCTT	19189515	True	NA	6	True	AATAAA	-15	NA	19192910	19201866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19193101_19193938_19194134_19196965_19197047_19197520_19197622_19198106_19198233_19198656_19198724_19199153_19199235_19201648
transcript_7.known	ERCC-00016	+	834	1	FSM	ERCC-00016A	DQ883664	834	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00016_+_0_800
transcript_70.known	ERCC-00145	+	1024	1	FSM	ERCC-00145A	DQ875386	1024	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1439	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00145_+_0_1000
transcript_700.known	SIRV7	-	2247	6	FSM	SIRV7A	SIRV702	2247	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1581.10551197572	10703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGTGTTAATATGAATCAAC	NA	False	NA	NA	False	TATAAA	-22	NA	114916	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_2676_2993_3112_4095_4180_4725_4811_43028_43078_114680
transcript_70000.known	chr19	-	992	6	FSM	ENSG00000254901.8	ENST00000462790.8	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	28.3379604064936	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-19188921	True	NA	-4	True	NA	NA	NA	19192152	19176905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192080
transcript_70001.known	chr19	-	877	6	FSM	ENSG00000254901.8	ENST00000494489.6	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	59.2466032781627	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCTGAGAACATTGTGTGGA	-19192498	True	NA	-106	True	NA	NA	NA	19192588	19177007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19186033_19186099_19186892_19187006_19192529
transcript_70009.known	chr19	-	801	4	FSM	ENSG00000254901.8	ENST00000585679.1	801	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	38.6091526281874	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTTTGAGTCCGTTTCTG	-19188908	True	NA	-4	True	NA	NA	NA	19192139	19176905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19177461_19180685_19180762_19182572_19182684_19192080
transcript_70010.known	chr19	-	1489	4	FSM	ENSG00000254901.8	ENST00000477565.3	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_3	14.0079342596338	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACACACTCATGTGCCAGGA	-19192499	True	NA	-9	True	AATAAA	-13	NA	19192589	19181881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19182684_19186033_19186099_19186892_19187006_19192080
transcript_70016.known	chr19	-	572	2	FSM	ENSG00000254901.8	ENST00000462498.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCCATCAGCATCCGGGA	-19192501	True	NA	NA	False	NA	NA	NA	19192591	19182622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19182684_19192080
transcript_70018.known	chr19	-	424	3	FSM	ENSG00000254901.8	ENST00000591398.1	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	10.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTCTGGTGACCTC	-19186937	False	NA	-2	True	NA	NA	NA	19187027	19182459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19182684_19186033_19186099_19186892
transcript_70019.known	chr19	+	389	3	FSM	ENSG00000064490.14	ENST00000540977.1	389	3	0	0	0	0	multi-exon	FALSE	canonical	3	359	junction_2	6.5	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTTTGCTGTGCTTCCC	19198625	False	NA	9	True	AATAAA	-18	NA	19198636	19201869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19198724_19199153_19199235_19201648
transcript_7002.known	chr1	-	1908	9	FSM	ENSG00000116791.14	ENST00000340866.10	1908	9	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_2	37.2558720203943	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCTTTTCTAGTTTTTAT	-74727789	True	NA	-18	True	AATAAA	-19	NA	74733050	74705485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_70020.known	chr19	-	1290	5	FSM	ENSG00000184162.15	ENST00000331552.12	1290	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	65.8691885482127	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGAATTGTGACTTTCA	-19201950	True	NA	0	True	TATAAA	-22	NA	19203414	19201408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_70021.known	chr19	-	859	6	FSM	ENSG00000184162.15	ENST00000420605.7	859	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	63.6917577085136	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCAAAATGTGTGAATTGTG	-19201893	True	NA	-7	True	TATAAA	-15	NA	19203357	19201415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19201564_19201930_19202042_19202330_19202399_19202469_19202576_19202790_19202882_19203022
transcript_70022.known	chr19	+	2361	5	FSM	ENSG00000130287.14	ENST00000590187.2	2361	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	5.22015325445528	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACAGATCCTATGTGTGCTG	19226816	False	NA	19	True	AGTAAA	-32	NA	19226842	19238792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19227074_19227280_19228640_19233788_19233906_19234982_19235097_19238252
transcript_70026.known	chr19	-	1518	10	FSM	ENSG00000213996.13	ENST00000389363.5	1518	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	6.68515953621837	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACTGCCTAAGTGTTTC	-19272930	True	NA	-4	True	AGTAAA	-21	NA	19273301	19264365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19264874_19266489_19266610_19267620_19267714_19267985_19268088_19268629_19268755_19269686_19269770_19270172_19270277_19270344_19270443_19271021_19271126_19273120
transcript_70029.nnic	chr19	-	532	3	Antisense	novelGene_ENSG00000129933.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGCTGCTAAAACCGTTAC	-19365052	True	NA	NA	False	AGTAAA	-20	NA	19365091	19358608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_19358962_19362680_19362774_19365005
transcript_70032.known	chr19	+	979	7	FSM	ENSG00000250067.12	ENST00000514277.6	979	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	43.4805192650175	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGCCTCGCCTCCGCCTCC	19528827	True	NA	4	True	AATAAA	-17	NA	19528910	19537581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19528992_19529363_19529514_19532631_19532741_19535033_19535145_19535336_19535451_19535528_19535680_19537318
transcript_70044.known	chr19	+	521	5	FSM	ENSG00000186010.19	ENST00000507754.9	521	5	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	208.03665542399	59826	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTGTTTTCCTGGGGA	19476256	True	NA	27	True	AATAAA	-17	NA	19516224	19528198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700_19527771_19528006
transcript_70053.known	chr19	+	502	5	FSM	ENSG00000186010.19	ENST00000606722.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	1	46	junction_3	4195.69340961658	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCTGCCTGTTTTCCTGG	19476292	True	NA	24	True	AATAAA	-14	NA	19516260	19528195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527373_19527700_19527771_19528006
transcript_70058.known	chr19	+	1166	5	FSM	ENSG00000186010.19	ENST00000502506.6	1166	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	4168.40802945201	717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCCTGTTTTCCTGGGG	19515711	True	NA	26	True	AATAAA	-16	NA	19515735	19528197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19516333_19526024_19526261_19527280_19527353_19527700_19527771_19528006
transcript_70063.known	chr19	+	576	4	FSM	ENSG00000186010.19	ENST00000428459.6	576	4	0	0	0	0	multi-exon	FALSE	canonical	3	9353	junction_3	135.534333493604	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCACACAACCCGCTGGGTG	19476261	True	NA	NA	False	NA	NA	NA	19516229	19528022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19516333_19526181_19526261_19527280_19527353_19527700
transcript_70077.known	chr19	+	878	6	FSM	ENSG00000250067.12	ENST00000436027.9	878	6	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	43.5274625954695	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCCGCCTCGCCTCCGCCTC	19528842	False	NA	3	True	AATAAA	-16	NA	19528860	19537580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19528992_19532631_19532741_19535033_19535145_19535336_19535451_19535528_19535680_19537318
transcript_70078.known	chr19	-	727	2	FSM	ENSG00000105717.14	ENST00000558276.7	727	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTTTGCCAGATTTGT	-19563812	False	NA	1	True	ATTAAA	-25	NA	19563824	19561706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19562118_19563508
transcript_70079.known	chr19	-	2546	6	FSM	ENSG00000064547.14	ENST00000542587.5	2546	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	68.4356632173606	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628736	False	NA	-28	True	AGTAAA	-16	NA	19628930	19623668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19624570_19626542_19627285_19627396_19627505_19627753_19627970_19628091_19628168_19628427
transcript_70085.nnic	chr19	-	1892	4	NNC	ENSG00000064547.14	novel	2546	6	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	76.5027232630752	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628057	True	NA	-28	True	AGTAAA	-16	NA	19628560	19623668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_19624570_19626542_19627285_19627396_19627505_19628419
transcript_70086.nic	chr19	-	2358	4	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	89	junction_2	48.7920758593715	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19625936	True	NA	-28	True	AGTAAA	-16	NA	19628233	19623668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19624570_19626542_19627285_19627396_19627970_19628091
transcript_70089.known	chr19	-	1786	3	FSM	ENSG00000064547.14	ENST00000407877.8	1786	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	69.5	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTTGTTATCAATTCA	-19625923	True	NA	-14	True	AGTAAA	-30	NA	19628220	19623654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19624570_19626542_19627285_19628091
transcript_70090.nic	chr19	-	1785	3	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_2	92	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19628066	True	NA	-28	True	AGTAAA	-16	NA	19628569	19623668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19624570_19626542_19627285_19628427
transcript_70093.nic	chr19	-	2470	3	NIC	ENSG00000064547.14	novel	2546	6	NA	NA	-12	0	intron_retention	FALSE	canonical	3	90	junction_2	51.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGGTCTCCAAAACATTTG	-19625936	True	NA	-28	True	AGTAAA	-16	NA	19628233	19623668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_19624570_19626542_19627970_19628091
transcript_70094.known	chr19	-	3849	26	FSM	ENSG00000105726.17	ENST00000357324.11	3849	26	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_13	51.906469731624	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTGCCTCCACCTCGTCT	-19654932	True	NA	-2	True	AATAAA	-23	NA	19663676	19645197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19645533_19645646_19645791_19645873_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19649941_19651688_19651798_19652594_19652721_19653783_19653895_19653968_19654145_19654542_19654701_19655118_19655240_19655315_19655454_19655527_19655655_19655877_19655934_19656053_19656184_19656659_19656767_19656846_19656917_19656993_19657150_19657335_19657409_19659600_19659792_19659897_19659988_19663270
transcript_70095.known	chr19	-	4241	9	FSM	ENSG00000105726.17	ENST00000469641.5	4241	9	0	0	0	0	multi-exon	FALSE	canonical	3	471	junction_7	33.8895264056611	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCCCTGCCTCCACCT	-19653349	False	NA	-7	True	AATAAA	-18	NA	19653396	19645202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19645533_19645646_19645986_19646204_19646348_19647128_19647326_19647413_19647529_19647598_19647760_19649566_19649664_19649740_19651798_19652594
transcript_70098.nnic	chr19	+	941	5	NNC	ENSG00000181896.12	novel	1830	5	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_4	20.1556443707464	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	19665456	True	NA	5	True	AATAAA	-18	NA	19668785	19680032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19668967_19677863_19677991_19678725_19678787_19679180_19679506_19679785
transcript_701.known	SIRV7	-	428	3	FSM	SIRV7A	SIRV704	428	3	0	0	0	0	multi-exon	FALSE	canonical	3	5708	junction_1	1622	19455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTCGTATTTGCTGCT	NA	False	NA	NA	False	ATTAAA	-33	NA	114738	55849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV7_-_56098_78841_78964_114680
transcript_70105.known	chr19	+	1152	4	FSM	ENSG00000181896.12	ENST00000444249.6	1152	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	15.2970585407784	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCCAGTTGTTTTCGAA	19665521	True	NA	5	True	AATAAA	-18	NA	19668850	19680032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19668967_19677863_19677987_19678725_19678787_19679180
transcript_70109.known	chr19	+	575	3	FSM	ENSG00000181896.12	ENST00000541458.5	575	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCTCCCAATTTATTTCA	19665466	True	NA	NA	False	NA	NA	NA	19668795	19679523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19668967_19678725_19678787_19679180
transcript_7011.known	chr1	-	1292	8	FSM	ENSG00000116791.14	ENST00000370871.7	1292	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	166.94689367018	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAGACTGCTCAGTTTCC	-74727761	True	NA	NA	False	ATTAAA	-15	NA	74733022	74705971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_74706458_74706898_74706995_74710097_74710248_74714578_74714631_74719208_74719373_74723117_74723271_74724710_74724835_74732955
transcript_70111.known	chr19	-	2963	4	FSM	ENSG00000105708.9	ENST00000344099.4	2963	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	3.39934634239519	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTATAACATTTTTCTT	-19732036	True	NA	-29	True	AATAAA	-15	NA	19733112	19710471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19713090_19714090_19714152_19714360_19714488_19732955
transcript_70118.nnic	chr19	+	745	4	NNC	ENSG00000267419.3	novel	803	5	NA	NA	14	5501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	4.92160768674447	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCTGAAAGATTTTTT	19776487	False	NA	10	True	AATAAA	-21	NA	19776649	19793608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19776995_19786608_19786692_19789679_19789822_19793433
transcript_70123.nnic	chr19	+	668	3	NNC	ENSG00000267419.3	novel	606	3	NA	NA	-7	5495	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTTATATTTTCTGAAAGA	NA	False	NA	4	True	AATAAA	-15	NA	19776578	19793602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19776995_19786608_19786692_19793433
transcript_70126.known	chr19	-	432	3	FSM	ENSG00000266904.7	ENST00000589508.1	432	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTTGAATCACTTTATAG	-19776204	True	NA	NA	False	AATACA	-24	NA	19776385	19761157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19761422_19762537_19762647_19776326
transcript_70127.known	chr19	+	447	2	FSM	ENSG00000267419.3	ENST00000586924.2	709	2	238	24	188	-24	multi-exon	FALSE	canonical	3	12	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTAAAAAAAATCAGTGAGA	19776809	True	NA	NA	False	AATAAA	-4	NA	19776823	19786884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19776995_19786608
transcript_70128.known	chr19	-	306	2	FSM	ENSG00000266904.7	ENST00000586816.1	306	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGATCCTGTTGATGAATG	-19776213	True	NA	NA	False	ATTAAA	-19	NA	19776394	19771571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19771806_19776322
transcript_70129.known	chr19	-	562	2	FSM	ENSG00000081665.14	ENST00000595825.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGGGAATCTGGGGACT	-19819942	True	NA	NA	False	AATACA	-25	NA	19821750	19820254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19820667_19821600
transcript_70130.known	chr19	-	3323	4	FSM	ENSG00000081665.14	ENST00000540806.7	3323	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	13.9283882771841	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGTTCAGAGTAATAGTTT	-19819942	True	NA	NA	False	AATAAA	-16	NA	19821750	19792710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19795661_19806030_19806127_19806941_19807069_19821600
transcript_70131.known	chr19	-	1007	4	FSM	ENSG00000081665.14	ENST00000545006.1	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	50.3388517946129	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTTGTATCTTTGTGTCT	-19819914	True	NA	-9	True	AATAAA	-13	NA	19821722	19798788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_19799451_19806030_19806127_19806941_19807069_19821600
transcript_70146.nnic	chr19	+	596	4	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-62	-4097	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.7462586092808	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTTCTTGACTGGAAAGAT	19859203	True	NA	NA	False	AATAAA	-18	NA	19865819	19887986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19887793
transcript_70147.known	chr19	+	3542	4	FSM	ENSG00000256771.5	ENST00000589717.2	3542	4	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	14.1656862405839	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGGGGTTTCAGAGTAATG	19859265	True	NA	NA	False	GATAAA	-7	NA	19865881	19894674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19878480_19878608_19880050_19880147_19891473
transcript_7015.known	chr1	+	1130	7	FSM	ENSG00000162623.16	ENST00000479111.5	1130	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.450354099019	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCTTATTCTGAAATA	74729676	True	NA	24	True	AATAAA	-16	NA	74733246	74764400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74733419_74734117_74734183_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_70153.nnic	chr19	+	522	4	NNC	ENSG00000256771.5	novel	3542	4	NA	NA	-62	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	67.7462586092808	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTACTGTCAAAAAATCTT	19859203	True	NA	3	True	AATAAA	-14	NA	19865819	19893712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19878480_19878608_19880050_19880147_19893593
transcript_70155.known	chr19	+	820	3	FSM	ENSG00000256771.5	ENST00000592725.1	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	57.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGAGAGAAACCCTACAAAT	19859269	True	NA	NA	False	NA	NA	NA	19865885	19892083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19880050_19880147_19891473
transcript_70157.nnic	chr19	+	446	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-73	-6313	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGTCCTTTTGATTATC	NA	False	NA	16	True	AATAAA	-19	NA	19865808	19872382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_70158.nnic	chr19	+	505	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-73	-6254	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCCTCCCTTTGAACTA	NA	False	NA	75	True	AATAAA	-14	NA	19865808	19872441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_70159.nnic	chr19	+	710	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-73	-6049	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAGCCCACTGTGTCCCT	NA	False	NA	NA	False	AATAAA	-22	NA	19865808	19872646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_70160.nnic	chr19	+	854	2	NNC	ENSG00000256771.5	novel	2268	2	NA	NA	-73	-5905	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTTGTGTCAGCTTTT	NA	False	NA	NA	False	AATAAA	-14	NA	19865808	19872790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_19866000_19872127
transcript_70161.known	chr19	+	297	2	FSM	ENSG00000256771.5	ENST00000589668.1	297	2	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAGTGGTAGAATTACA	19859301	True	NA	NA	False	NA	NA	NA	19865917	19878695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19878480
transcript_70162.known	chr19	+	2268	2	FSM	ENSG00000256771.5	ENST00000355650.4	2268	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAATGCCTACTCACATCTT	19859290	True	NA	20	True	AATACA	-19	NA	19865906	19893648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19866000_19891473
transcript_70168.known	chr19	+	868	3	FSM	ENSG00000184635.16	ENST00000592613.1	868	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTATATATGACATGGTGCT	19893137	True	NA	NA	False	NA	NA	NA	19900912	19909520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19907723_19907817_19908924
transcript_7017.known	chr1	-	1592	7	FSM	ENSG00000116791.14	ENST00000370872.7	1592	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	224.11858220346	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTAGTTTTTATATTA	-74727757	True	NA	-14	True	AATAAA	-23	NA	74733018	74705481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_74706458_74706898_74706995_74707102_74707205_74710097_74710248_74714578_74714631_74723117_74723271_74732955
transcript_70170.known	chr19	+	570	3	FSM	ENSG00000184635.16	ENST00000588146.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	157	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAACCCTTATAACACATA	19893170	True	NA	NA	False	NA	NA	NA	19900945	19933509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19916559_19916656_19933181
transcript_70173.nnic	chr19	+	1744	2	NIC	ENSG00000184635.16	novel	868	3	NA	NA	-6	963	combination_of_known_splicesites	FALSE	canonical	3	20	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGTATCAGCCCACTCTC	19893131	True	NA	7	True	AATAAA	-21	NA	19900906	19910483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_19901092_19908924
transcript_70174.known	chr19	+	2763	4	FSM	ENSG00000184635.16	ENST00000343769.6	2763	4	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	24.4994331000173	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAAATGTTGCTGTTTGTA	19893170	True	NA	NA	False	AATAAA	-20	NA	19900945	19935575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19933181
transcript_70175.known	chr19	+	590	4	FSM	ENSG00000184635.16	ENST00000591366.5	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	122.366480522877	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCACTACACTCCAGCTTG	19893152	True	NA	NA	False	NA	NA	NA	19900927	19927313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19927110
transcript_70176.known	chr19	+	1334	4	FSM	ENSG00000184635.16	ENST00000592160.5	1334	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	123.777578296269	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGCCATTTTGGTTT	19893195	True	NA	NA	False	NA	NA	NA	19900970	19932997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19932007
transcript_70177.known	chr19	+	583	5	FSM	ENSG00000184635.16	ENST00000586021.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	135.185058345958	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACATGGAAATTTACAGTTA	19893170	True	NA	-21	True	CATAAA	-45	NA	19900945	19933274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_19901092_19915279_19915407_19916559_19916656_19926100_19926222_19933181
transcript_70185.nic	chr19	-	894	5	NIC	ENSG00000197124.12	novel	581	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	3	9	junction_1	36.3412644248931	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	NA	False	NA	-5	True	AATAAA	-21	NA	20039550	20004419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_20004748_20007140_20007276_20023003_20023100_20024249_20024377_20039342
transcript_70193.known	chr19	-	3244	4	FSM	ENSG00000197124.12	ENST00000397165.7	3244	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	10.9848380355227	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACAGTTGTGCATTGAATTA	-20036982	True	NA	-3	True	AATAAA	-23	NA	20039505	20004417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20007276_20023003_20023100_20024249_20024377_20039342
transcript_70194.nic	chr19	-	759	4	NIC	ENSG00000197124.12	novel	3244	4	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	39.6568615332412	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	NA	False	NA	-5	True	AATAAA	-21	NA	20039550	20004419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_20004748_20023003_20023100_20024249_20024377_20039342
transcript_702.known	SIRV8001	+	8001	1	FSM	SIRV8001A	SIRV8001	8001	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	79	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV8001_+_0_8000
transcript_70200.known	chr19	-	395	3	FSM	ENSG00000197124.12	ENST00000599240.1	395	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCATGGAGTCAGTACAAA	-20036927	True	NA	NA	False	AATAAA	-14	NA	20039450	20030716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20030883_20030992_20031114_20039342
transcript_70202.known	chr19	-	474	3	FSM	ENSG00000197124.12	ENST00000602079.5	474	3	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	46	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAGTTGTGCATTGAAT	NA	False	NA	-5	True	AATAAA	-21	NA	20024299	20004419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20004748_20023003_20023100_20024249
transcript_70222.nnic	chr19	-	580	3	FSM	ENSG00000267383.8	ENST00000693630.1	520	3	-60	0	-34	0	multi-exon	FALSE	canonical	0	0	junction_1	6.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGTATTTAAGTTATCCT	NA	False	NA	NA	False	AATAAA	-22	NA	20238494	20184505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20184702_20217139_20217317_20238287
transcript_70223.nnic	chr19	-	750	3	NNC	ENSG00000267383.8	novel	558	3	NA	NA	-34	756	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	2.5	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGGTCAACTATCTGTAGC	NA	False	NA	-5	True	AATAAA	-17	NA	20238494	20215389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_20215756_20217139_20217317_20238287
transcript_7024.nnic	chr1	+	1345	6	NNC	ENSG00000162623.16	novel	1130	7	NA	NA	-72	0	at_least_one_novel_splicesite	FALSE	canonical	3	53	junction_1	63.3592929253476	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGTGTCTTATTCTGAAATA	74733067	True	NA	24	True	AATAAA	-16	NA	74733079	74764400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_74733532_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_70242.nnic	chr19	-	1004	2	ISM	ENSG00000267383.8	ENST00000693630.1	520	3	-8	31962	0	-322	5prime_fragment	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAATTGATTTTGACTGC	-20217559	True	NA	NA	False	NA	NA	NA	20238442	20216467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_20217317_20238287
transcript_70244.known	chr19	-	1268	2	FSM	ENSG00000267383.8	ENST00000592022.1	1268	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTACAGTGTTTTGCTGA	-20220387	False	NA	-7	True	ATTAAA	-11	NA	20220419	20216145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20217317_20220322
transcript_70245.known	chr19	-	618	2	FSM	ENSG00000267383.8	ENST00000585816.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAACGCCACAAAGATACTC	-20217548	True	NA	NA	False	AATACA	-2	NA	20238431	20228009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20228484_20238287
transcript_70252.known	chr19	+	1724	4	FSM	ENSG00000213988.11	ENST00000474284.1	1724	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	79.5165950534157	2910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCTTTTTTGAAATTTCCT	20068775	True	NA	-10	True	NA	NA	NA	20077993	20127076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20078136_20105220_20105317_20125005_20126167_20126751
transcript_70257.known	chr19	+	3744	4	FSM	ENSG00000213988.11	ENST00000418063.3	3744	4	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	93.4273336163816	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTAGATTGTGTGTGAAG	20068781	True	NA	6	True	AATAAA	-19	NA	20077999	20121165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20117780
transcript_70258.known	chr19	+	1918	6	FSM	ENSG00000213988.11	ENST00000469078.5	1918	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_3	99.7236180651304	2898	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATGTAAAAGCCTTCATT	20068775	True	NA	5	True	TATAAA	-5	NA	20077993	20127018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20078136_20104238_20104366_20105220_20105317_20121221_20121347_20125005_20126167_20126751
transcript_70262.known	chr19	+	3895	4	FSM	ENSG00000256229.8	ENST00000335117.9	3895	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	30.5068298363935	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAGATTATGTGTGAATTT	20163517	True	NA	15	True	AATAAA	-21	NA	20167213	20200488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20196963
transcript_70263.known	chr19	+	734	4	FSM	ENSG00000256229.8	ENST00000597083.5	734	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	34.0326640482673	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACCCTCTCTCACCCTCGAC	20163531	True	NA	NA	False	ATTAAA	-17	NA	20167227	20188776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20167361_20184355_20184483_20185986_20186083_20188398
transcript_70264.nnic	chr19	-	903	3	Fusion	ENSG00000279039.1_ENSG00000267383.8	novel	558	3	NA	NA	0	10	multi-exon	TRUE	canonical	2	5	junction_1	4	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTATGCTCCTCTTTTTTT	-20217559	True	NA	1	True	AATATA	-18	NA	20238442	20207181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_20207753_20217139_20217317_20238287
transcript_70265.known	chr19	-	1590	1	FSM	ENSG00000280079.1	ENST00000624228.1	1590	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCCACTCTCTGTCCCTTT	-20222154	False	NA	-17	True	AATAAA	-20	NA	20222186	20220596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20220600_20222200
transcript_70279.nnic	chr19	-	1108	4	FSM	ENSG00000231205.12	ENST00000690249.1	1564	4	-31	487	-9	0	multi-exon	FALSE	canonical	3	26	junction_2	166.879197824854	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20424974	False	NA	-1	True	AATATA	-18	NA	20424987	20405449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20406133_20408949_20409046_20409829_20409957_20424785
transcript_70281.nnic	chr19	-	1098	4	NIC	ENSG00000231205.12	novel	1564	4	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_2	166.70199625546	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTCATTCTCGAATT	-20424973	False	NA	-1	True	AATATA	-18	NA	20424986	20405449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_20406133_20408949_20409046_20417665_20417784_20424785
transcript_70287.known	chr19	-	1067	3	FSM	ENSG00000231205.12	ENST00000542380.6	1075	3	1	7	0	-7	multi-exon	FALSE	canonical	2	3	junction_2	1.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGTATGTCTCTTGATTG	-20424956	False	NA	-6	True	AATAAA	-11	NA	20424969	20340268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20341102_20375959_20376010_20424785
transcript_70293.known	chr19	-	636	3	FSM	ENSG00000231205.12	ENST00000596724.2	922	3	2	284	0	-284	multi-exon	FALSE	canonical	2	11	junction_1	11	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCACAAGTAGCTATAAAGTA	-20417116	True	NA	NA	False	NA	NA	NA	20424956	20415304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20415652_20417665_20417784_20424785
transcript_703.known	SIRV8002	+	8000	1	FSM	SIRV8002A	SIRV8002	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	109	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV8002_+_0_8000
transcript_70300.known	chr19	-	1004	3	FSM	ENSG00000231205.12	ENST00000541160.6	1120	3	10	106	-1	-4	multi-exon	FALSE	canonical	3	43	junction_1	189	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCACTTTCAGTCTTTTTTT	-20417119	True	NA	-3	True	ATTAAA	-17	NA	20424959	20340367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20341102_20408949_20409046_20424785
transcript_70301.known	chr19	-	3330	3	FSM	ENSG00000231205.12	ENST00000615684.4	3330	3	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_2	35.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATCATTAGATTATGTG	-20417116	True	NA	-12	True	AATAAA	-14	NA	20424956	20395954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20399039_20408949_20409025_20424785
transcript_70302.known	chr19	-	1446	3	FSM	ENSG00000231205.12	ENST00000597334.2	1464	3	9	9	0	-4	multi-exon	FALSE	canonical	3	381	junction_1	20	1301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAATATGTTGAAGAAT	-20424956	False	NA	-7	True	AATAAA	-17	NA	20424969	20404966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20406133_20408949_20409046_20424785
transcript_70309.known	chr19	-	8352	4	FSM	ENSG00000237440.9	ENST00000427401.9	8352	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3.74165738677394	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTGCCTCAGAAAAGCTTT	-20563552	True	NA	1	True	AATAAA	-16	NA	20565781	20537991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20545977_20552474_20552571_20553708_20553836_20565637
transcript_70318.known	chr19	-	6063	4	FSM	ENSG00000188171.17	ENST00000601440.6	6063	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26.5120517668642	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGATGACATTTTTGT	-20656205	True	NA	NA	False	AATAAA	-19	NA	20661571	20619938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20625651_20645683_20645780_20646278_20646406_20661443
transcript_70319.known	chr19	-	1123	4	FSM	ENSG00000188171.17	ENST00000291750.6	1123	4	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	26.5120517668642	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATTTCAATGGATTTATTT	-20656230	True	NA	NA	False	AATATA	-16	NA	20661596	20644701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_20645449_20645683_20645780_20646278_20646406_20661443
transcript_7032.known	chr1	+	3437	6	FSM	ENSG00000162623.16	ENST00000370867.8	3437	6	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	15.4090882274066	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTGTAGTCTTAGTGTC	74729581	True	NA	NA	False	AATAAA	-16	NA	74733151	74766677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74733419_74736541_74736623_74738689_74738789_74748750_74748823_74752291_74752426_74763893
transcript_70320.known	chr19	+	757	4	FSM	ENSG00000160229.13	ENST00000594534.5	757	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	6.54896090146283	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGGAATATTTATAACATT	20773742	True	NA	NA	False	TATAAA	-1	NA	20776309	20799393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20799000
transcript_70324.known	chr19	+	4539	4	FSM	ENSG00000160229.13	ENST00000344519.10	4539	4	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_3	6.94422221866655	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CAAATGGAAAACAAACAAAA	20773736	True	NA	NA	False	AATAAA	-24	NA	20776303	20809995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20776451_20792511_20792639_20793782_20793879_20805826
transcript_7033.known	chr1	+	3335	5	FSM	ENSG00000162623.16	ENST00000457880.6	3335	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	89.6813804532468	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTTTGTGTAGTCTTAGT	74729581	True	NA	NA	False	AATAAA	-13	NA	74733151	74766674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_74733419_74736541_74736623_74748750_74748823_74752291_74752426_74763893
transcript_70332.nnic	chr19	+	661	3	NNC	ENSG00000160229.13	novel	4539	4	NA	NA	-34	-1512	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	8.5	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAATTTCTTCA	NA	False	NA	NA	False	AAGAAA	-10	NA	20776269	20793085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_20776451_20792511_20792639_20792732
transcript_70333.nic	chr19	+	1123	3	ISM	ENSG00000160229.13	ENST00000594534.5	757	4	-40	4796	-34	0	5prime_fragment	FALSE	canonical	3	18	junction_1	4.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCTTCTAATTTTTT	NA	False	NA	NA	False	CATAAA	-16	NA	20776269	20794597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_20776451_20792511_20792639_20793782
transcript_70336.nnic	chr19	+	662	3	NNC	ENSG00000160229.13	novel	1120	3	NA	NA	-4	-1512	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAAAAAATTTCTTCA	NA	False	NA	NA	False	AAGAAA	-10	NA	20776299	20793085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_20776482_20792511_20792639_20792732
transcript_70337.known	chr19	+	1120	3	FSM	ENSG00000160229.13	ENST00000360204.5	1120	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTATCTTCTAATTTTTT	20773736	True	NA	NA	False	CATAAA	-16	NA	20776303	20794597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20776482_20792511_20792639_20793782
transcript_70339.known	chr19	+	549	3	FSM	ENSG00000105750.15	ENST00000599885.1	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	27	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGAATTCATACTAGAGTAAA	20921652	True	NA	NA	False	NA	NA	NA	20923303	20949093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923404_20934948_20935048_20948743
transcript_70340.known	chr19	+	2333	4	FSM	ENSG00000105750.15	ENST00000328178.13	2333	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	8.65383665716478	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAGCATTCAG	NA	False	NA	14	True	AATAAA	-17	NA	20923250	20950697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923404_20934023_20934151_20934948_20935048_20948743
transcript_70341.known	chr19	+	1259	4	FSM	ENSG00000105750.15	ENST00000596476.1	1259	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	33.7276675083759	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTCACTTTTGTCAATA	20921658	True	NA	NA	False	ATTAAA	-45	NA	20923309	20943726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_20923417_20934023_20934151_20934948_20935048_20942800
transcript_70345.known	chr19	+	3886	5	FSM	ENSG00000118620.13	ENST00000261560.10	3886	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	5.7662812973354	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAGGTTATGTGTGGTTA	21020118	True	NA	6	True	AATAAA	-20	NA	21020656	21060050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21056630
transcript_7035.known	chr1	+	1451	11	FSM	ENSG00000117054.15	ENST00000526196.5	1451	11	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_1	137.499854545378	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGATGTGTTTTCTTTA	75719961	True	NA	NA	False	NA	NA	NA	75724705	75762954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_70350.nnic	chr19	+	617	5	Fusion	ENSG00000118620.13_ENSG00000160352.16	novel	595	5	NA	NA	-46	-10	multi-exon	FALSE	canonical	0	0	junction_4	17.8675683852056	29	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAAAAGAAAATTCATACTG	NA	False	NA	NA	False	NA	NA	NA	21020587	21118467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_21020804_21022788_21022882_21033455_21033583_21034085_21034185_21118385
transcript_70351.known	chr19	+	3021	4	FSM	ENSG00000118620.13	ENST00000595401.1	3021	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	10.3387082795139	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACCA	21020178	True	NA	NA	False	NA	NA	NA	21020716	21036802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21020804_21022788_21022882_21033455_21033583_21034088
transcript_70353.nic	chr19	+	545	2	ISM	ENSG00000118620.13	ENST00000595833.1	502	3	-69	10600	-46	-10600	5prime_fragment	FALSE	canonical	3	41	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAACACTGACCCCAGTGA	NA	False	NA	NA	False	AAAAAG	-7	NA	21020587	21023117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21020804_21022788
transcript_70360.known	chr19	+	2696	7	FSM	ENSG00000160352.16	ENST00000613286.4	2696	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	37.7598405128459	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074413	True	NA	NA	False	NA	NA	NA	21082202	21125094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21109622_21109645_21116806_21118886_21124960
transcript_70366.known	chr19	+	2671	6	FSM	ENSG00000160352.16	ENST00000610902.4	2671	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	24.2123935206745	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074419	True	NA	NA	False	NA	NA	NA	21082208	21125094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806_21118886_21124960
transcript_70371.known	chr19	+	2562	6	FSM	ENSG00000160352.16	ENST00000425625.5	2562	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	40.9555856996332	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGATAATTCATACTGGA	21074413	True	NA	NA	False	TTTAAA	-23	NA	21082202	21118885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21109622_21109645_21116806
transcript_70396.known	chr19	+	8752	5	FSM	ENSG00000160352.16	ENST00000456283.7	8752	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	26.9953699733862	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGCTGGGCATGGGCAT	21074413	True	NA	NA	False	NA	NA	NA	21082202	21125094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116806
transcript_70397.known	chr19	+	2066	5	FSM	ENSG00000160352.16	ENST00000620627.1	2066	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	26.9953699733862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCATACTGGAACGAAACC	21074460	True	NA	NA	False	AAAAAG	-9	NA	21082249	21118477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811_21098911_21116828
transcript_704.known	SIRV8003	+	8000	1	FSM	SIRV8003A	SIRV8003	8000	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	115	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	8000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV8003_+_0_8000
transcript_70403.known	chr19	+	800	5	FSM	ENSG00000160352.16	ENST00000596053.5	800	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	38.347098977628	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTTAAAAATAATATTCTG	21074384	True	NA	NA	False	NA	NA	NA	21082173	21125270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814_21098911_21124960
transcript_70407.known	chr19	+	647	4	FSM	ENSG00000160352.16	ENST00000618008.4	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	15.121728296285	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAGAAACCTTTCAAATG	21074413	True	NA	NA	False	CATAAA	-37	NA	21082202	21117084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21082349_21098184_21098312_21098814_21098911_21116806
transcript_70412.nic	chr19	+	586	4	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-105	19503	-14	7216	5prime_fragment	FALSE	canonical	3	50	junction_3	21.7460085737335	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074355	True	NA	NA	False	NA	NA	NA	21082144	21098974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098811
transcript_70413.nic	chr19	+	583	4	ISM	ENSG00000160352.16	ENST00000425625.5	2562	6	-58	19911	-14	7216	5prime_fragment	FALSE	canonical	3	53	junction_3	20.3360653902262	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074355	True	NA	NA	False	NA	NA	NA	21082144	21098974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21082349_21083977_21084070_21098184_21098312_21098814
transcript_70419.nic	chr19	+	1144	3	NIC	ENSG00000160352.16	novel	898	2	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	41.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	21074355	True	NA	5	True	AATAAA	-14	NA	21082144	21091758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_21082349_21083977_21084070_21090910
transcript_70420.nic	chr19	+	1086	3	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-105	19503	-14	7216	intron_retention	FALSE	canonical	3	94	junction_1	2	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	21074355	True	NA	NA	False	NA	NA	NA	21082144	21098974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21082349_21083977_21084070_21098184
transcript_70423.nic	chr19	+	1003	2	ISM	ENSG00000160352.16	ENST00000618008.4	647	4	-67	18110	-23	7216	intron_retention	FALSE	canonical	3	16	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAGCCGGCCCTTACAATG	NA	False	NA	NA	False	NA	NA	NA	21082135	21098974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21082349_21098184
transcript_70425.nic	chr19	+	2122	2	ISM	ENSG00000160352.16	ENST00000620627.1	2066	5	-105	32582	-14	-5863	5prime_fragment	FALSE	canonical	3	94	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCCAAAGGAGTATTGC	21074355	True	NA	NA	False	NA	NA	NA	21082144	21085895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21082349_21083977
transcript_70426.known	chr19	+	898	2	FSM	ENSG00000160352.16	ENST00000600535.1	898	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACAGTGTTTTGCTGAGTT	21083992	True	NA	5	True	AATAAA	-14	NA	21084019	21091758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21084070_21090910
transcript_70439.known	chr19	+	1971	6	FSM	ENSG00000196705.8	ENST00000600692.5	1971	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	11.7813411800185	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGCTCCCAGCATTTTGGG	21136661	True	NA	NA	False	ATTAAA	-30	NA	21142023	21184092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21175452_21175475_21182622
transcript_70447.known	chr19	+	13894	5	FSM	ENSG00000196705.8	ENST00000311048.11	13894	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	16.3171688720807	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAATGGTGTGTGTGTGTG	21136677	True	NA	NA	False	TATAAA	-16	NA	21142039	21196053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21182622
transcript_70448.nnic	chr19	+	870	5	NIC	ENSG00000196705.8	novel	13894	5	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	16	junction_4	23.1988685068906	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	21136637	True	NA	15	True	AATAAA	-24	NA	21141999	21190231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570_21167667_21189864
transcript_70451.nic	chr19	+	566	4	ISM	ENSG00000196705.8	ENST00000599296.5	586	6	-35	14931	-24	-14931	5prime_fragment	FALSE	canonical	3	47	junction_3	12.2292908852294	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCAGTCCTTACAATGT	21136637	True	NA	NA	False	AAAACA	-41	NA	21141999	21167729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21142187_21143550_21143644_21166334_21166462_21167570
transcript_70455.known	chr19	+	610	3	FSM	ENSG00000196705.8	ENST00000594425.5	610	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	34	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATTGTCTTTATTTACT	21136674	True	NA	15	True	AATAAA	-24	NA	21142036	21190231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21142187_21143550_21143644_21189864
transcript_70460.nic	chr19	+	525	2	ISM	ENSG00000196705.8	ENST00000599296.5	586	6	-35	38772	-24	-38772	5prime_fragment	FALSE	canonical	3	68	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAAAACAAAAAAACCTGAC	21136637	True	NA	NA	False	GATAAA	-34	NA	21141999	21143888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21142187_21143550
transcript_70464.known	chr19	-	4004	4	FSM	ENSG00000182141.10	ENST00000356929.3	4004	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	8.05536398239638	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGATGTGTGAACTTGTTT	-21324725	True	NA	1	True	AATAAA	-25	NA	21329410	21291159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21294740_21309245_21309342_21310500_21310628_21329209
transcript_70469.known	chr19	-	567	3	FSM	ENSG00000182141.10	ENST00000601295.1	567	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	6	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACTGGAGAAAAACCCTACAA	-21324651	True	NA	NA	False	NA	NA	NA	21329336	21294395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21294740_21309245_21309342_21329209
transcript_70480.known	chr19	+	1021	5	FSM	ENSG00000172687.14	ENST00000597492.1	1021	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	112.353237603551	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATCTTTTTTTATTAGTA	21350321	True	NA	NA	False	NA	NA	NA	21359020	21376424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21360474_21360597_21361765_21361859_21375237_21375365_21375868
transcript_70483.known	chr19	+	2442	5	FSM	ENSG00000172687.14	ENST00000311015.7	2442	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	51.5333629797241	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAAAAATGTTACCTGTC	21350230	True	NA	6	True	ATTAAA	-10	NA	21358929	21379300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21377388
transcript_70484.known	chr19	+	1142	5	FSM	ENSG00000172687.14	ENST00000380870.8	1142	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	68.9891295785068	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAATGTTACCTGTCCC	21350292	True	NA	8	True	ATTAAA	-12	NA	21358991	21379302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378628
transcript_70485.known	chr19	+	747	5	FSM	ENSG00000172687.14	ENST00000597810.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_4	85.7069862963341	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTTTTAATATGATTT	21350311	True	NA	NA	False	AAGAAA	-38	NA	21359010	21378310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21378012
transcript_70486.known	chr19	+	6177	5	FSM	ENSG00000172687.14	ENST00000683779.1	6177	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	86.1365195489114	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGTGTGAAGTTAATG	21350300	True	NA	10	True	AATAAA	-25	NA	21358999	21388582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21375237_21375365_21375868_21375965_21382865
transcript_70487.known	chr19	+	1086	3	FSM	ENSG00000172687.14	ENST00000594245.1	1086	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	105	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTTTTTAAATGCA	21350330	True	NA	NA	False	AATAAA	-22	NA	21359029	21372842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21359144_21361765_21361859_21371963
transcript_70488.known	chr19	+	546	5	FSM	ENSG00000196268.12	ENST00000596302.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	10.9201648339208	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTATGAATGAGTGTAATGT	21395216	True	NA	NA	False	AAGAAA	-11	NA	21397118	21423040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405757_21405857_21413465_21413509_21422912
transcript_7049.known	chr1	+	1941	10	FSM	ENSG00000117054.15	ENST00000681450.1	1941	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	230.285330260817	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75720016	True	NA	-69	True	AAAAAG	-19	NA	75724760	75763596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75734790_75734876_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_70497.known	chr19	+	1536	4	FSM	ENSG00000196268.12	ENST00000594390.5	1536	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	9.53356643071673	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACGTGTGAAGAATCAGAA	21395230	True	NA	51	True	AATAAA	-15	NA	21397132	21414643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21413465
transcript_70498.known	chr19	+	5023	4	FSM	ENSG00000196268.12	ENST00000392288.7	5023	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	4.02768199119819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAACATTTTCCACCTTA	21395230	True	NA	95	True	AATAAA	-19	NA	21397132	21427577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405760_21405857_21422912
transcript_70502.known	chr19	+	4785	4	FSM	ENSG00000197013.11	ENST00000358491.9	4785	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	11.5181016954473	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATATTTTCAATTATTTG	21504700	True	NA	6	True	AATAAA	-20	NA	21505601	21540668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21505775_21529657_21529785_21530588_21530685_21536279
transcript_70507.nic	chr19	+	474	3	ISM	ENSG00000196268.12	ENST00000594390.5	1536	4	-49	8720	-35	87	5prime_fragment	FALSE	canonical	3	21	junction_2	4	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCAGTCCTGGCCG	21395181	True	NA	NA	False	TTTAAA	-14	NA	21397083	21405923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21397268_21405128_21405256_21405760
transcript_70511.nic	chr19	+	979	2	ISM	ENSG00000196268.12	ENST00000339914.6	1665	4	-72	2876	-35	87	intron_retention	FALSE	canonical	3	29	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCAGTCCTGGCCG	21395181	True	NA	NA	False	TTTAAA	-14	NA	21397083	21405923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_21397268_21405128
transcript_70513.known	chr19	+	1769	1	FSM	ENSG00000196268.12	ENST00000599461.1	1769	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GACAAACAACAAGAACAAAA	21395263	True	NA	NA	False	AAAAAG	-37	NA	21397165	21398934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397200_21398900
transcript_70514.known	chr19	+	1665	4	FSM	ENSG00000196268.12	ENST00000339914.6	1665	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.8415464455544	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATATATGTGTGTGTGTTT	21395253	True	NA	3	True	ATTAAA	-24	NA	21397155	21408799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21397268_21405128_21405256_21405757_21405857_21407472
transcript_70515.known	chr19	-	803	3	FSM	ENSG00000268119.7	ENST00000663704.1	803	3	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	9	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGTCATTCAACTCTGAA	-21460123	True	NA	NA	False	AATACA	-22	NA	21463888	21453942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21454473_21456460_21456589_21463743
transcript_70516.known	chr19	+	375	3	FSM	ENSG00000197013.11	ENST00000598747.1	375	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	3	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTCTGCAAGACTGTCTA	21504739	True	NA	7	True	AATAAA	-20	NA	21505640	21507664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_21505775_21505984_21506081_21507519
transcript_70518.known	chr19	-	588	5	FSM	ENSG00000197020.12	ENST00000598026.1	588	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.1959532632039	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTAATTTTTAGTAGAG	-21766498	True	NA	NA	False	NA	NA	NA	21767549	21743077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21743224_21744016_21744116_21744940_21745068_21765693_21765787_21767426
transcript_70520.known	chr19	-	5691	5	FSM	ENSG00000197020.12	ENST00000358296.11	5691	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	13.1220234720107	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACATAATTTTTTTTTTTC	NA	False	NA	NA	False	AATAAA	-5	NA	21767579	21722770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21727990_21744016_21744116_21744940_21745068_21765693_21765787_21767426
transcript_70532.nic	chr19	-	461	2	ISM	ENSG00000197020.12	ENST00000598026.1	588	5	-58	22429	-28	-12314	5prime_fragment	FALSE	canonical	3	79	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGAAAATTTTGTTACCAAA	NA	False	NA	NA	False	AATAAA	-27	NA	21767607	21765506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_21765787_21767426
transcript_70533.known	chr19	-	3399	7	FSM	ENSG00000198521.12	ENST00000595461.5	3399	7	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	51.4576416957568	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGATAATTCATTCTGAAG	-21849390	True	NA	NA	False	AATAAA	-16	NA	21852028	21807280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21843144_21843327_21845391_21845507_21850937_21851163_21851904
transcript_70542.known	chr19	-	5235	4	FSM	ENSG00000198521.12	ENST00000354959.9	5235	4	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_3	31.0161248385416	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTATATATTTTTCTT	-21832779	True	NA	NA	False	AATAAA	-29	NA	21836182	21804945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21836035
transcript_70545.known	chr19	-	5249	4	FSM	ENSG00000198521.12	ENST00000357491.10	5249	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	58.0708379672812	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACATTGGTATATATTTTT	-21849430	True	NA	NA	False	AATAAA	-26	NA	21852068	21804948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_21809808_21817887_21817987_21819094_21819222_21851904
transcript_70552.nnic	chr19	-	532	2	NNC	ENSG00000198521.12	novel	5235	4	NA	NA	-29	5222	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTCTTTTTTTCTTTA	-21832813	True	NA	NA	False	AATAAA	-18	NA	21836216	21834374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_21834726_21836035
transcript_70564.known	chr19	-	354	1	FSM	ENSG00000236312.3	ENST00000465389.1	354	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	260	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAACTTTTTTGAGAA	NA	False	NA	NA	False	NA	NA	NA	22368952	22368598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_22368600_22369000
transcript_70576.known	chr19	+	581	4	FSM	ENSG00000267886.1	ENST00000594318.1	581	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	5.71547606649408	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCCTCAGAAGCCGTGG	23071089	True	NA	NA	False	NA	NA	NA	23075200	23095616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23075388_23095011_23095155_23095262_23095441_23095543
transcript_70578.known	chr19	+	464	3	FSM	ENSG00000183850.14	ENST00000593635.1	464	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	29	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGTTTTTAAAATAAT	23071098	True	NA	NA	False	AATACA	-45	NA	23075209	23136106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23075388_23134079_23134207_23135947
transcript_70581.known	chr19	+	2326	4	FSM	ENSG00000183850.14	ENST00000597761.7	2326	4	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7.93025150224688	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTGTCCAAAGATTTTTT	23115756	True	NA	16	True	AATAAA	-17	NA	23117024	23147221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23117177_23134079_23134207_23135947_23136044_23145270
transcript_70582.known	chr19	+	563	3	FSM	ENSG00000267886.1	ENST00000600223.1	563	3	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	9	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGCTTAGGAAAATGAGGAA	23071099	True	NA	NA	False	AATAGA	-20	NA	23075210	23100361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_23075388_23098339_23098414_23100049
transcript_70586.nnic	chr19	-	1283	5	NNC	ENSG00000196081.10	novel	583	5	NA	NA	-25	2340	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	17.6405073623181	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATGTGGCCTCTCTGCCTGC	-23240488	True	NA	2	True	AATAAA	-24	NA	23250419	23219258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23219422_23223301_23224019_23231265_23231362_23232166_23232294_23250239
transcript_70588.known	chr19	-	549	5	FSM	ENSG00000284428.1	ENST00000639327.1	549	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.9802528961023	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAGGAAAATGAGGAAGTC	-23272024	True	NA	-67	True	NA	NA	NA	23274228	23260021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23272618_23272724_23274075
transcript_70593.known	chr19	-	2798	4	FSM	ENSG00000196081.10	ENST00000418100.6	2798	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	11.4697670227235	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAGAAAAAAAAAAACTAAT	-23240463	True	NA	NA	False	NA	NA	NA	23250394	23221598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23250239
transcript_70598.nnic	chr19	-	1143	4	Fusion	ENSG00000269837.1_ENSG00000284428.1	novel	561	4	NA	NA	9	2	multi-exon	FALSE	non_canonical	0	0	junction_1	18.0616229121921	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGACCCTTAGTCGACAC	-23272015	True	NA	-5	True	AATAAA	-22	NA	23274219	23255050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_23255674_23260683_23260935_23261619_23261745_23274075
transcript_7060.known	chr1	+	1422	9	FSM	ENSG00000117054.15	ENST00000525808.5	1422	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	208.480664571082	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGTAGACTTAATGGT	75720022	True	NA	-42	True	NA	NA	NA	75724766	75763168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75732643_75732742_75732852_75732923_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_70600.known	chr19	-	583	4	FSM	ENSG00000284428.1	ENST00000640838.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	7.48331477354788	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTGTGTTTGTCCTATG	-23272047	True	NA	49	True	NA	NA	NA	23274251	23259905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23274075
transcript_70604.known	chr19	-	574	3	FSM	ENSG00000284428.1	ENST00000638822.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCGCAACCTCCGCCT	-23272044	True	NA	NA	False	NA	NA	NA	23274248	23260658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260935_23261619_23261745_23274075
transcript_70609.known	chr19	-	752	3	FSM	ENSG00000284428.1	ENST00000639997.1	752	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAATGTTTTGAGTGAT	-23271992	True	NA	NA	False	NA	NA	NA	23274196	23269762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23270293_23272618_23272720_23274075
transcript_70611.nnic	chr19	-	551	2	NNC	ENSG00000196081.10	novel	2798	4	NA	NA	-9	-15400	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTAGATTCTTTTGCTTTT	-23240472	True	NA	NA	False	AATAAA	-22	NA	23250403	23246259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23246647_23250239
transcript_70612.known	chr19	-	562	2	FSM	ENSG00000284428.1	ENST00000640354.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTCTTCTGGGGTCCACA	-23272043	True	NA	NA	False	NA	NA	NA	23274247	23261354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23261745_23274075
transcript_70613.known	chr19	-	583	5	FSM	ENSG00000196081.10	ENST00000597537.1	583	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	19.5831560275661	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGGACATCACAATTTACA	-23240457	True	NA	-17	True	CATAAA	-41	NA	23250388	23223929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23224019_23231265_23231362_23232166_23232294_23242588_23242711_23250239
transcript_70614.known	chr19	-	556	5	FSM	ENSG00000284428.1	ENST00000639752.1	556	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	13.0838641081295	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCTGTACAAAAGTCATAAA	-23272040	True	NA	-46	True	NA	NA	NA	23274244	23260000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23260117_23260863_23260935_23261619_23261745_23270217_23270293_23274075
transcript_70615.known	chr19	-	579	2	FSM	ENSG00000284428.1	ENST00000638919.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGCTCCCATCCCAGTAAG	-23272043	True	NA	2	True	AATAAA	-19	NA	23274247	23269885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23270293_23274075
transcript_70618.known	chr19	-	695	2	FSM	ENSG00000167232.14	ENST00000595533.1	695	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGATACACACTGGAGAGA	-23391135	True	NA	NA	False	NA	NA	NA	23395418	23362124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23362726_23395324
transcript_70619.known	chr19	-	5400	4	FSM	ENSG00000167232.14	ENST00000300619.12	5400	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	4.49691252107735	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTCTGAGTCCCGAATAA	-23391188	True	NA	-8	True	AATAAA	-31	NA	23395471	23357695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23362726_23373741_23373838_23374637_23374765_23395324
transcript_70645.nnic	chr19	-	781	7	NNC	ENSG00000269416.7	novel	798	6	NA	NA	-16	-87	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	41.7519127971668	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23403494_23403719_23403748_23404476_23404563_23404740_23404847_23404950_23405109_23405257_23405336_23415893
transcript_70649.nnic	chr19	-	797	7	NNC	ENSG00000269416.7	novel	798	6	NA	NA	-16	-87	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_3	33.9104212103988	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23403510_23403719_23403748_23404476_23404563_23404740_23404847_23404950_23405109_23405257_23405336_23415893
transcript_70671.nnic	chr19	-	675	6	NNC	ENSG00000269416.7	novel	798	6	NA	NA	-16	-87	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	47.8957200593122	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23403494_23403719_23403748_23404476_23404563_23404950_23405109_23405257_23405336_23415893
transcript_70672.nnic	chr19	-	695	6	NNC	ENSG00000269416.7	novel	798	6	NA	NA	-16	-87	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	43.9972726427446	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23403494_23403719_23403748_23404740_23404847_23404950_23405109_23405257_23405336_23415893
transcript_70674.nnic	chr19	-	686	6	NIC	ENSG00000269416.7	novel	2766	8	NA	NA	-7	-87	combination_of_known_splicesites	FALSE	canonical	3	14	junction_5	50.213145689152	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411641	True	NA	NA	False	NA	NA	NA	23416082	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23405999_23406106_23415893
transcript_70699.known	chr19	-	2387	5	FSM	ENSG00000269416.7	ENST00000600643.5	2387	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_3	35.8364339743786	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATACATGTTGGCGTGGCT	-23411630	True	NA	NA	False	ATTAAA	-12	NA	23416071	23399232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23405257_23405336_23415893
transcript_70705.nic	chr19	-	589	5	NIC	ENSG00000269416.7	novel	798	6	NA	NA	-16	-87	combination_of_known_junctions	FALSE	canonical	3	51	junction_2	33.3691474269272	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403494_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_70710.nic	chr19	-	605	5	ISM	ENSG00000269416.7	ENST00000593573.5	798	6	-32	2383	-16	-87	5prime_fragment	FALSE	canonical	3	51	junction_2	27.6710588883042	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_23403510_23403719_23403748_23404950_23405109_23405257_23405336_23415893
transcript_70713.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601293.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	48.5546656414763	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGCCCACAAATAGGATTGT	-23411634	True	NA	NA	False	NA	NA	NA	23416075	23400986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23401048_23403205_23403494_23403719_23403748_23415893
transcript_70719.known	chr19	-	559	4	FSM	ENSG00000269416.7	ENST00000601338.5	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	41.555852643026	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGGTGAGTTGGTGACA	-23411633	True	NA	NA	False	NA	NA	NA	23416074	23403211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23403494_23403719_23403748_23405257_23405336_23415903
transcript_70720.nic	chr19	-	447	4	NIC	ENSG00000269416.7	novel	798	6	NA	NA	-16	-87	combination_of_known_junctions	FALSE	canonical	3	46	junction_2	16.1107279647928	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411650	True	NA	NA	False	NA	NA	NA	23416091	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23403510_23403719_23403748_23405257_23405336_23415893
transcript_70725.nnic	chr19	-	639	3	NNC	ENSG00000269416.7	novel	1338	6	NA	NA	-7	-4	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	1	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATTCTACTACTGTGTAT	-23411641	True	NA	-8	True	AATAAA	-23	NA	23416082	23399100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23399368_23400864_23401048_23415893
transcript_70730.nic	chr19	-	365	3	ISM	ENSG00000269416.7	ENST00000601293.5	559	4	-28	2380	-28	-87	5prime_fragment	FALSE	canonical	3	28	junction_2	51.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	NA	False	NA	NA	False	NA	NA	NA	23416103	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_23403494_23403719_23403748_23415893
transcript_70734.known	chr19	-	470	3	FSM	ENSG00000269416.7	ENST00000594576.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	18	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTCTGAATCTCACACA	-23411624	True	NA	NA	False	NA	NA	NA	23416065	23403279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23403510_23405257_23405336_23415903
transcript_70739.nic	chr19	-	332	2	ISM	ENSG00000269416.7	ENST00000598922.1	572	3	-17	950	-7	-87	5prime_fragment	FALSE	canonical	3	16	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAAAGTGTACTAACAA	-23411641	True	NA	NA	False	NA	NA	NA	23416082	23403366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_23403510_23415893
transcript_70741.known	chr19	-	595	5	FSM	ENSG00000197372.10	ENST00000597074.5	595	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	106.082515053142	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGGACTTAACCAATGTTT	-23683029	True	NA	77	True	NA	NA	NA	23687140	23654545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23654707_23656721_23656823_23662113_23662210_23663031_23663159_23687030
transcript_70745.known	chr19	-	581	4	FSM	ENSG00000197372.10	ENST00000596211.5	581	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.180268534022	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTTGGGGACAGATCAAGA	-23683101	True	NA	NA	False	NA	NA	NA	23687212	23574056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23574233_23662113_23662210_23663031_23663159_23687030
transcript_70747.nnic	chr19	-	880	4	NNC	ENSG00000197372.10	novel	592	3	NA	NA	-13	23171	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	103.308599190322	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCGAATGTGTTATAATACA	-23683122	True	NA	NA	False	AATAAA	-15	NA	23687233	23629629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23630084_23662113_23662210_23663031_23663159_23687030
transcript_70748.known	chr19	-	2311	4	FSM	ENSG00000197372.10	ENST00000359788.9	2311	4	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_3	13.0213499897497	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTATCATAAAGCTTATCAT	-23683101	True	NA	96	True	CATAAA	-22	NA	23687212	23652800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23654707_23662113_23662210_23663031_23663159_23687030
transcript_70750.known	chr19	-	669	4	FSM	ENSG00000197372.10	ENST00000601010.5	669	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	102.84076148212	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTTTTTTTTTTTAAT	-23683077	True	NA	NA	False	NA	NA	NA	23687188	23658384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23658673_23662113_23662210_23663031_23663159_23687030
transcript_70753.known	chr19	-	6497	4	FSM	ENSG00000196172.9	ENST00000402377.3	6497	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	4.02768199119819	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTATTCCATTGTGTATAT	-23756055	True	NA	-4	True	AATAAA	-22	NA	23758891	23739194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23745324_23754822_23754919_23755424_23755552_23758746
transcript_70756.nnic	chr19	-	735	4	NNC	ENSG00000196172.9	novel	6497	4	NA	NA	-62	-1813	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	12.9700509722291	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGTTTTCTTGCTT	-23758882	False	NA	NA	False	AATACA	-18	NA	23758953	23746776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23747082_23754822_23754919_23755424_23755552_23758746
transcript_70757.nnic	chr19	-	755	4	NNC	ENSG00000196172.9	novel	6497	4	NA	NA	-62	-1813	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.3836326735943	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTGTGTGTTTTCTTGCTT	-23758882	False	NA	NA	False	AATACA	-18	NA	23758953	23746776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_23747102_23754822_23754919_23755424_23755552_23758746
transcript_70758.known	chr19	-	628	3	FSM	ENSG00000196172.9	ENST00000528059.1	628	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	8.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGAAATCGTACATATGT	-23756004	True	NA	NA	False	CATAAA	-14	NA	23758840	23744885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_23745324_23754822_23754919_23758746
transcript_70761.nnic	chr19	-	2143	2	NIC	ENSG00000196172.9	novel	628	3	NA	NA	-30	1530	combination_of_known_splicesites	FALSE	canonical	3	35	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACTGTCAAAAATCTTTCA	-23756085	True	NA	-8	True	AATAAA	-17	NA	23758921	23743355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_23745324_23758746
transcript_70797.known	chr19	+	723	2	ISM	ENSG00000288920.1	ENST00000687994.1	4132	4	8	38494	1	0	5prime_fragment	FALSE	canonical	1	6	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATGCACAGAAGAAAGAAAC	23752668	True	NA	NA	False	NA	NA	NA	23763011	23832196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_23763135_23831596
transcript_70801.known	chr19	+	888	1	ISM	ENSG00000288920.1	ENST00000484897.4	2140	4	64158	819	45081	-819	mono-exon	FALSE	NA	NA	NA	NA	NA	95	NA	NA	NA	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTCTTGCATAGGCTCT	23827122	False	NA	-80	True	NA	NA	NA	23827161	23828049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_23827200_23828000
transcript_70811.nnic	chr19	+	810	6	NIC	ENSG00000213096.11	novel	4244	5	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_5	43.4971263418631	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	24028644	True	NA	12	True	AATAAA	-13	NA	24033408	24107349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_24033622_24046183_24046280_24049404_24049549_24105939_24106067_24106547_24106644_24107215
transcript_70818.known	chr19	+	4244	5	FSM	ENSG00000213096.11	ENST00000613065.4	4244	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	62.1424774208431	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	24028640	True	NA	2	True	ATTAAA	-34	NA	24033404	24129961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24105939_24106067_24106547_24106644_24126253
transcript_70819.known	chr19	+	792	5	FSM	ENSG00000213096.11	ENST00000594886.5	792	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	71.0914903487049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAATGTAAAAAACGTGTCA	24084349	True	NA	NA	False	AAGAAA	-6	NA	24087175	24126545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24091900_24092016_24105939_24106067_24106547_24106644_24126253
transcript_70820.known	chr19	+	511	4	FSM	ENSG00000213096.11	ENST00000339642.10	511	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	55.6796392070048	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTAGTGTCCTCTCTAAT	24084357	True	NA	12	True	AATAAA	-13	NA	24087183	24107349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24107215
transcript_70821.known	chr19	+	4089	4	FSM	ENSG00000213096.11	ENST00000357002.5	4089	4	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	44.4996878890428	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGAGTAAGTATGTTTG	24084360	True	NA	9	True	AATAAA	-1	NA	24087186	24129968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24105939_24106067_24106547_24106644_24126253
transcript_70828.known	chr19	+	928	3	FSM	ENSG00000268362.6	ENST00000656966.1	928	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	2	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTACTTTAGAAAACTTTTG	24028719	True	NA	33	True	AATAAA	-30	NA	24033483	24037405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24036252_24036383_24036745
transcript_70829.nic	chr19	+	1132	3	ISM	ENSG00000213096.11	ENST00000339642.10	511	4	-46	-3	-22	0	intron_retention	FALSE	canonical	3	58	junction_1	44.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTGTCCTCTCTAATTTT	24084311	True	NA	15	True	AATAAA	-16	NA	24087137	24107352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_24087338_24105939_24106067_24106547
transcript_70831.known	chr19	+	3982	3	FSM	ENSG00000213096.11	ENST00000611359.3	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	68.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATAAATTATGGAGTAAGT	24084333	True	NA	2	True	ATTAAA	-34	NA	24087159	24129961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24087338_24106547_24106644_24126253
transcript_70833.known	chr19	+	819	2	FSM	ENSG00000268362.6	ENST00000664197.1	819	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAAAGCATTTACTTTAG	24028688	True	NA	23	True	AATAAA	-20	NA	24033452	24037395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24036745
transcript_70834.known	chr19	+	1657	4	FSM	ENSG00000268362.6	ENST00000671141.1	1657	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	34.9380403953437	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAACAAAACAAAACAAA	24028689	True	NA	NA	False	ACTAAA	-31	NA	24033453	24066716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24046183_24046280_24049409_24049549_24065462
transcript_70835.known	chr19	+	2183	5	FSM	ENSG00000268362.6	ENST00000654594.1	2183	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	23.6893963620857	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGTGATGTGACTCTCT	24028684	True	NA	NA	False	AATAAA	-41	NA	24033448	24066952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_24033622_24042442_24042723_24046183_24046280_24049404_24049549_24065462
transcript_70836.known	chr19	-	1295	6	FSM	ENSG00000261824.8	ENST00000656647.1	1295	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	19.5816240388789	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-27793805	True	NA	-4	True	AATAAA	-27	NA	27793901	27721701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27721816_27727816_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_70837.known	chr19	-	1110	5	FSM	ENSG00000261824.8	ENST00000667396.1	1110	5	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	17.1955662890176	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTATGTGAAAATGCTTT	-27793598	False	96	NA	False	AATAAA	-44	NA	27793694	27715576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27715859_27732795_27732968_27746080_27746341_27792999_27793233_27793531
transcript_70838.known	chr19	-	1131	5	FSM	ENSG00000261824.8	ENST00000655166.2	1132	5	1	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	18.6882315910308	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTGTGTTGTGTGGACT	-27793804	True	NA	-4	True	AATAAA	-27	NA	27793900	27721701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27721816_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_70839.known	chr19	-	1625	5	FSM	ENSG00000261824.8	ENST00000659734.1	1625	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	17.4714052096561	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGTGATGTCTGGATT	-27793819	True	NA	NA	False	AATAAA	-27	NA	27793915	27727386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27727980_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_70840.known	chr19	-	4506	5	FSM	ENSG00000261824.8	ENST00000665874.1	4506	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	18.1865334794732	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGAAAATGCTTTATGATG	NA	False	NA	NA	False	AAGAAA	-19	NA	27793938	27727881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771663_27771990_27792999
transcript_70841.known	chr19	-	3429	5	FSM	ENSG00000261824.8	ENST00000657659.2	3517	5	88	0	8	0	multi-exon	FALSE	canonical	3	16	junction_4	13.3486890742125	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGAACTACTTATGAA	-27793738	False	NA	NA	False	AATAAA	-12	NA	27793834	27728229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_70843.nic	chr19	-	1216	5	NIC	ENSG00000261824.8	novel	2505	4	NA	NA	-2	-907	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	20.3147114180832	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGAAGAACTTTTTTGTAG	NA	False	NA	NA	False	AATAAA	-22	NA	27793926	27732274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_27732448_27732795_27732968_27746097_27746341_27792999_27793233_27793531
transcript_70847.known	chr19	-	2560	3	FSM	ENSG00000261824.8	ENST00000667678.1	2560	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAGAAACAAACTGAAAGTT	NA	False	NA	NA	False	AATACA	-23	NA	27794003	27775783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27777639_27792999_27793233_27793531
transcript_70850.known	chr19	-	4005	6	FSM	ENSG00000261824.8	ENST00000666734.1	4005	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	16.2775919595006	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACCAAATATCTTGCAATAA	NA	False	NA	NA	False	NA	NA	NA	27793996	27728261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27730708_27732795_27732968_27746097_27746341_27771543_27771990_27792999_27793233_27793531
transcript_70851.known	chr19	-	578	2	FSM	ENSG00000261824.8	ENST00000591458.1	578	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTCTCAATCTCTTGAC	-27793282	False	NA	NA	False	NA	NA	NA	27793378	27791702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27791902_27792999
transcript_70853.known	chr19	-	2480	3	FSM	ENSG00000261824.8	ENST00000561521.1	2480	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	21	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTAAAATGTTTTTTA	NA	False	NA	-10	True	AATAAA	-16	NA	27746230	27730272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_27732448_27732795_27732968_27746097
transcript_70854.known	chr19	+	1631	4	FSM	ENSG00000267575.8	ENST00000653426.1	1631	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.74165738677394	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27792995	True	NA	NA	False	AATAAA	-21	NA	27793442	27806782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753_27798177_27805604_27806186_27806322
transcript_70855.known	chr19	+	1824	3	FSM	ENSG00000267575.8	ENST00000585917.6	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGTGTTGGCTTGTAATTT	NA	False	NA	NA	False	AATAAA	-24	NA	27793430	27806785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793651_27797753_27798177_27805604
transcript_70856.known	chr19	+	1759	3	FSM	ENSG00000267575.8	ENST00000659857.2	1764	3	5	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27793004	True	NA	NA	False	AATAAA	-21	NA	27793451	27806782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753_27798177_27805604
transcript_70860.nic	chr19	+	773	2	ISM	ENSG00000267575.8	ENST00000592404.6	1796	3	-31	2095	-10	14	5prime_fragment	FALSE	canonical	3	10	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAACAGAACAAAAC	NA	False	NA	NA	False	NA	NA	NA	27793420	27798296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_27793651_27797753
transcript_70861.known	chr19	+	656	2	FSM	ENSG00000267575.8	ENST00000586784.1	656	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AGCAAAAAAAAAAAAAAAAA	27793035	True	NA	NA	False	NA	NA	NA	27793482	27798282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793610_27797753
transcript_70862.nic	chr19	+	662	2	ISM	ENSG00000267575.8	ENST00000587188.2	1696	3	-18	2093	-2	16	5prime_fragment	FALSE	canonical	3	5	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAACAGAACAAAACAG	27793558	False	NA	NA	False	NA	NA	NA	27794005	27798298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_27794123_27797753
transcript_70863.known	chr19	+	1335	2	FSM	ENSG00000267575.8	ENST00000590628.1	1335	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGATGTGTTGGCTTGTAA	27793046	False	NA	NA	False	AATAAA	-21	NA	27793493	27806782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_27793651_27805604
transcript_70864.nnic	chr19	-	1664	2	NNC	ENSG00000260725.1	novel	1570	2	NA	NA	6013	36	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCCTGGTTGCTTTCAAC	-28423459	False	NA	1	True	ATTAAA	-18	NA	28423477	28418446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_28419912_28423278
transcript_70865.nnic	chr19	-	539	2	NNC	ENSG00000260725.1	novel	1570	2	NA	NA	6013	-1089	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGCATGGGAAAAATATTTG	-28423459	False	NA	NA	False	AGTAAA	-16	NA	28423477	28419571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_28419912_28423278
transcript_7087.known	chr1	+	1688	7	FSM	ENSG00000117054.15	ENST00000679687.1	1688	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	194.892277938352	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAAAGTTACCTGTTCA	75720016	True	NA	-69	True	AAAAAG	-19	NA	75724760	75763596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_70871.nnic	chr19	-	1175	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-89	-1946	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2031	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	-29180493	True	NA	-14	True	ATTAAA	-25	NA	29213240	29207265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213002_29213055
transcript_70872.nnic	chr19	-	1156	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-73	-1946	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	121	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGTGAAATCTGTAACTGA	-29180477	True	NA	-14	True	ATTAAA	-25	NA	29213224	29207265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_70873.nnic	chr19	-	1053	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-89	-2068	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2031	67	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	-29180493	True	NA	-81	True	AATAAA	-18	NA	29213240	29207387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213002_29213055
transcript_70874.nnic	chr19	-	1034	3	NNC	ENSG00000169021.6	novel	3086	2	NA	NA	-73	-2068	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	2031	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTTTCAGGCATTCACTTA	-29180477	True	NA	-81	True	AATAAA	-18	NA	29213224	29207387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_29208159_29212904_29213009_29213065
transcript_70875.known	chr19	-	3086	2	FSM	ENSG00000169021.6	ENST00000304863.6	3086	2	0	0	0	0	multi-exon	FALSE	canonical	3	4062	junction_1	0	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGTCGTTTGAATTT	-29180404	True	NA	NA	False	ACTAAA	-15	NA	29213151	29205319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29208159_29212904
transcript_70877.known	chr19	+	1558	3	FSM	ENSG00000267498.2	ENST00000590607.2	1558	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACAATTCAAGGTGAGAT	29213267	False	NA	NA	False	NA	NA	NA	29213282	29216604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29213409_29213713_29213822_29215280
transcript_70878.known	chr19	+	709	2	FSM	ENSG00000267498.2	ENST00000587859.1	709	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATTTAGCACACTGGCAT	29213219	False	NA	NA	False	ATTAAA	-18	NA	29213234	29215815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29213409_29215280
transcript_70880.known	chr19	+	846	7	FSM	ENSG00000105171.10	ENST00000591824.5	846	7	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_2	108.736301819279	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAGTTAAGCCAATTCCATT	29599629	True	NA	NA	False	NA	NA	NA	29606302	29615458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29606326_29608656_29608710_29610319_29610633_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_70882.known	chr19	+	579	7	FSM	ENSG00000105171.10	ENST00000586420.5	579	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	103.645898241186	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCACTGTGGAAACCGATGG	29599609	True	NA	NA	False	NA	NA	NA	29606282	29615266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29606326_29608656_29608710_29610408_29610633_29611867_29611940_29612116_29612179_29613870_29613973_29615243
transcript_70892.known	chr19	+	2321	6	FSM	ENSG00000105171.10	ENST00000221770.7	2321	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_2	106.562657624517	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTAGGTACCACTTGCCA	29599620	True	NA	12	True	AATACA	-19	NA	29606293	29617237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29606326_29608656_29608710_29611861_29611940_29612116_29612179_29613870_29613973_29615243
transcript_70898.known	chr19	+	608	2	FSM	ENSG00000105171.10	ENST00000587232.1	608	2	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTCTGAGTGCTCTATG	29607151	False	NA	-78	True	TTTAAA	-13	NA	29613824	29615703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29613973_29615243
transcript_70900.known	chr19	+	1699	2	FSM	ENSG00000166289.6	ENST00000436066.4	1699	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGGAGTGTCCTTGCTTC	29663323	True	NA	29	True	AATAAA	-36	NA	29665460	29675477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29665506_29673823
transcript_70901.known	chr19	-	4265	3	FSM	ENSG00000131943.20	ENST00000623113.3	3726	3	0	-539	0	-100	multi-exon	FALSE	canonical	3	6	junction_2	34.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTGCCTGGTGTGAATT	-29714100	False	NA	NA	False	NA	NA	NA	29715060	29699036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29708253_29708424_29714906
transcript_70902.known	chr19	-	4348	3	FSM	ENSG00000131943.20	ENST00000323670.14	4348	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTCTTTGGGATTCATT	-29714301	True	NA	NA	False	NA	NA	NA	29715261	29698936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29708253_29708424_29715124
transcript_70905.known	chr19	-	1188	2	FSM	ENSG00000131943.20	ENST00000392275.1	1188	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCTTCTCATCTTGGGAG	NA	False	NA	NA	False	NA	NA	NA	29715457	29702340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29714906
transcript_70906.known	chr19	-	1912	2	FSM	ENSG00000131943.20	ENST00000392276.1	1912	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCATTTTCCCACATATTAT	-29714261	True	NA	-15	True	AATAAA	-15	NA	29715221	29701162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_29702978_29715124
transcript_70908.known	chr19	+	1641	9	FSM	ENSG00000105173.14	ENST00000357943.9	1641	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_6	107.475505930421	237	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGCTGGTTTTATGAGCT	29810100	False	NA	16	True	AATAAA	-18	NA	29812653	29824308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29812777_29812968_29813038_29817136_29817283_29817405_29817542_29820701_29820849_29821721_29821818_29822239_29822352_29822445_29822604_29823654
transcript_70913.known	chr19	+	3460	11	FSM	ENSG00000105176.18	ENST00000392271.6	3460	11	0	0	0	0	multi-exon	TRUE	canonical	3	317	junction_2	69.7954153222115	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTTTGAGCCTGTCTA	29935628	True	NA	13	True	ATTAAA	-21	NA	29942238	30016612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_29942665_29971192_29971228_29985222_29985302_29986281_29986418_30005360_30005453_30005650_30005709_30007469_30007639_30009004_30009354_30011093_30011237_30012284_30012532_30014886
transcript_70916.known	chr19	-	441	2	FSM	ENSG00000121297.8	ENST00000558569.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATTTGCAGTAATATCTC	-31349230	False	NA	-12	True	AATAAA	-19	NA	31349255	31308344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_31308710_31349179
transcript_70929.nnic	chr19	+	461	3	Intergenic	novelGene_23	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	22	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGCTGGATGTCATTCA	31349195	True	NA	5	True	AATATA	-16	NA	31349743	31383826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr19_+_31349846_31367531_31367642_31383577
transcript_70932.nnic	chr19	+	560	3	NNC	ENSG00000267662.1	novel	560	4	NA	NA	56370	-9110	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.5	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGTTGGGTTATTTTG	NA	False	NA	NA	False	GATAAA	-22	NA	31405250	31408684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_31405400_31405695_31405812_31408389
transcript_70934.known	chr19	+	7716	7	FSM	ENSG00000168813.17	ENST00000355898.6	7716	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	10.8269211792745	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	32342016	True	NA	NA	False	AATAAA	-13	NA	32345609	32387667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32345784_32347244_32347339_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_70938.nic	chr19	+	584	2	ISM	ENSG00000168813.17	ENST00000587084.5	5560	4	-21	12145	-6	-12145	5prime_fragment	FALSE	canonical	3	65	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TACACAAAATTTGAATATTA	32342010	True	NA	NA	False	NA	NA	NA	32345603	32347648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_32345784_32347244
transcript_70939.known	chr19	+	7638	6	FSM	ENSG00000168813.17	ENST00000311921.8	7638	6	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	31.582273509043	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTACCTGTTTCTTTAGC	32342000	True	NA	NA	False	AATAAA	-13	NA	32345593	32387667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32345784_32352828_32354958_32356615_32356734_32360503_32360619_32382466_32382602_32382716
transcript_70941.nnic	chr19	-	1085	4	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_2	2.05480466765633	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405191	True	NA	1	True	AATAAA	-24	NA	32405602	32390049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32399750_32399869_32404990
transcript_70949.known	chr19	+	2456	3	FSM	ENSG00000178904.19	ENST00000587077.6	2456	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	21	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTGTATCTATAAGAATG	NA	False	NA	NA	False	AATAAA	-21	NA	32405542	32413187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32405910_32408216_32408357_32411238
transcript_70950.nnic	chr19	-	975	3	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	3	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405199	True	NA	1	True	AATAAA	-24	NA	32405610	32390049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32404990
transcript_70951.nnic	chr19	-	421	3	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-23	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	4.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405172	True	NA	1	True	AATAAA	-24	NA	32405583	32390049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32391115_32391187_32405517
transcript_70952.known	chr19	-	972	3	FSM	ENSG00000267213.4	ENST00000592680.2	972	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405149	True	NA	1	True	AATAAA	-24	NA	32405560	32390049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32390334_32399750_32399869_32404990
transcript_70953.nnic	chr19	-	497	3	NNC	ENSG00000267213.4	novel	972	3	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTACTTTTTCTCA	-32405201	True	NA	1	True	AATAAA	-24	NA	32405612	32390049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32390334_32399750_32399869_32405517
transcript_70954.known	chr19	+	601	6	FSM	ENSG00000105185.12	ENST00000586035.1	601	6	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	932.057208544626	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAAATAAAACATTTGGGT	32581507	False	NA	3	True	AATAAA	-9	NA	32581525	32587414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581701_32582194_32582233_32584949_32585012_32585815_32585908_32586857_32586930_32587252
transcript_70956.known	chr19	+	468	5	FSM	ENSG00000105185.12	ENST00000592786.5	468	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	973.273952954665	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTGGCCAGATCTGT	32551486	True	NA	41	True	AATAAA	-29	NA	32581231	32587452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32586857_32586930_32587252
transcript_70957.known	chr19	+	558	6	FSM	ENSG00000105185.12	ENST00000221784.8	558	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	926.273091480045	791	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGGGTAAGTTGTTTTA	32551456	True	NA	14	True	AATAAA	-20	NA	32581201	32587425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581328_32582194_32582233_32584954_32585012_32585815_32585908_32586857_32586930_32587252
transcript_70958.known	chr19	+	1799	4	FSM	ENSG00000105185.12	ENST00000419343.7	1799	4	0	0	0	0	multi-exon	FALSE	canonical	3	2119	junction_1	133.27665461988	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGCCTTTTAAAAAAATAAAC	32551455	True	NA	-24	True	NA	NA	NA	32581200	32587387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32581328_32582194_32582233_32584949_32585012_32585815
transcript_70959.known	chr19	-	4432	29	FSM	ENSG00000105186.16	ENST00000306065.9	4432	29	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_26	28.660641966976	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCATGGTATTTTTTT	-32669631	True	NA	-7	True	AGTAAA	-16	NA	32675180	32597005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32598379_32599703_32599777_32599971_32600051_32602014_32602127_32604262_32604425_32605834_32605955_32607634_32607833_32615657_32615781_32617588_32617634_32619259_32619380_32619493_32619554_32622421_32622620_32625873_32625967_32626711_32626828_32628082_32628166_32628721_32628850_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_70961.nnic	chr19	-	1692	14	NNC	ENSG00000105186.16	novel	3301	12	NA	NA	-32	-3046	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	97.4372806919356	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAGAACACAAGAGG	NA	False	NA	NA	False	NA	NA	NA	32675224	32629852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_32630152_32631401_32631495_32639355_32639489_32640306_32640386_32642023_32642146_32643122_32643200_32643286_32643353_32643430_32643485_32643571_32643632_32644324_32644480_32646458_32646616_32649681_32649793_32658913_32659046_32675070
transcript_70972.known	chr19	-	568	2	FSM	ENSG00000267475.2	ENST00000592431.2	585	2	14	3	14	-3	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTCAGCCTCATTTTG	-32691709	False	NA	NA	False	AGTAAA	-19	NA	32691750	32687088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32687269_32691362
transcript_70973.known	chr19	+	1317	13	FSM	ENSG00000173809.18	ENST00000421545.2	1317	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	1.60511335702152	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGTGGTTTTTTTTTTC	32720021	False	NA	NA	False	AATAAA	-18	NA	32720072	32790808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32720097_32731724_32731884_32738855_32738993_32742780_32742901_32748475_32748532_32749783_32749870_32755991_32756182_32757037_32757131_32772752_32772851_32773455_32773533_32777148_32777230_32790530_32790592_32790673
transcript_70976.known	chr19	-	5673	19	FSM	ENSG00000121289.18	ENST00000305768.10	5673	19	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_7	17.209672847157	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGCTTCCTGAGTGTTT	-32969321	True	NA	-1	True	ATTAAA	-17	NA	32971958	32875924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32923438_32923543_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_70982.known	chr19	-	1340	9	FSM	ENSG00000121289.18	ENST00000590597.6	1340	9	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	14.1509716980849	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGTACAAAGTAAAAGAGGC	-32969326	True	NA	NA	False	AATAAA	-38	NA	32971963	32931206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_70984.nic	chr19	-	878	7	ISM	ENSG00000121289.18	ENST00000590597.6	1340	9	-21	6323	7	0	5prime_fragment	FALSE	canonical	3	59	junction_1	13.4989711542111	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTGTTGAACTTTCACC	-32969347	True	NA	1	True	AATAAA	-24	NA	32971984	32937529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_70988.known	chr19	-	558	2	FSM	ENSG00000121289.18	ENST00000592401.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCCACACCCCGGCCTCC	-32969279	True	NA	NA	False	NA	NA	NA	32971916	32971172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32971650_32971835
transcript_70989.known	chr19	-	2903	2	FSM	ENSG00000121289.18	ENST00000591863.1	2903	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCTGTGTACCTCATTC	-32969354	True	NA	0	True	AATAAA	-19	NA	32971991	32968908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32971656_32971835
transcript_7099.known	chr1	+	2172	13	FSM	ENSG00000117054.15	ENST00000370834.9	2172	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	187.497314795587	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCATATCTTTCTGTATT	75719964	True	NA	11	True	AATAAA	-16	NA	75724708	75763491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75724818_75728400_75728489_75732643_75732742_75732852_75732923_75733050_75733150_75733527_75733629_75734790_75734872_75739979_75740111_75745805_75745915_75749418_75749560_75750450_75750547_75761121_75761371_75762691
transcript_70990.known	chr19	-	2482	18	FSM	ENSG00000121289.18	ENST00000586984.6	2482	18	0	0	0	0	multi-exon	FALSE	canonical	1	10	junction_7	18.4904351969235	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATTGATAACATTTTGCT	-32969318	True	NA	-9	True	AATAAA	-17	NA	32971955	32879008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32879379_32881843_32882014_32887751_32887842_32899856_32899999_32901244_32901413_32915336_32915518_32918223_32918340_32926189_32926274_32926933_32926985_32931428_32931572_32933450_32933670_32937630_32937674_32939856_32939886_32948265_32948369_32953614_32953802_32959899_32960059_32966359_32966467_32971835
transcript_70991.known	chr19	+	836	4	FSM	ENSG00000131944.10	ENST00000589646.5	836	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.8326666559997	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGCCTGGCCAACATGGAGA	32971643	True	NA	NA	False	NA	NA	NA	32972220	32976850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972347_32973425_32973563_32974059_32974213_32976430
transcript_70993.known	chr19	+	784	3	FSM	ENSG00000131944.10	ENST00000590179.1	784	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	18.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTTGCAGTGAGCTGAGAT	32971682	True	NA	NA	False	NA	NA	NA	32972259	32976974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_32972347_32974059_32974213_32976430
transcript_70995.known	chr19	-	3501	15	FSM	ENSG00000131941.8	ENST00000254260.8	3501	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_13	8.55742904362839	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAATATTTCTTTTTACTT	-33062454	True	NA	-6	True	AATAAA	-18	NA	33064888	32978591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_32980257_32990513_32990670_32991822_32991970_32993976_32994054_32996025_32996221_32999585_32999706_33002246_33002404_33002812_33003001_33008013_33008181_33011678_33011804_33012646_33012725_33021570_33021647_33026503_33026633_33044248_33044365_33064783
transcript_70999.known	chr19	+	3191	20	FSM	ENSG00000076650.7	ENST00000170564.7	3191	20	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_15	14.7114442798042	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCTGCCGTTTTTTGGGA	33080525	True	NA	NA	False	NA	NA	NA	33081180	33130542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494_33101575_33106694_33106900_33109716_33110017_33111723_33111903_33112485_33112614_33113766_33113904_33114252_33114420_33117824_33118042_33119009_33119118_33125104_33125203_33126587_33126734_33130129
transcript_71.known	ERCC-00147	+	1007	1	FSM	ERCC-00147A	DQ516790	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	ATTAAA	-14	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00147_+_0_1000
transcript_7100.known	chr1	+	1448	9	FSM	ENSG00000137955.16	ENST00000319942.8	1448	9	0	0	0	0	multi-exon	FALSE	canonical	1	208	junction_8	132.643083121586	3707	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGATAGGTTTGAATATGGT	75777593	True	NA	31	True	AATAAA	-24	NA	75786255	75795086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75786275_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_71003.nic	chr19	+	1575	9	ISM	ENSG00000076650.7	ENST00000170564.7	3191	20	-16	28502	-16	-7837	5prime_fragment	FALSE	canonical	3	80	junction_5	12.0701077045733	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATCAGTTGGCCAGGCG	33080509	True	NA	NA	False	NA	NA	NA	33081164	33102040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_33081267_33088133_33088269_33090779_33090866_33093358_33093520_33094171_33094270_33095761_33095821_33096206_33096447_33097754_33097903_33101494
transcript_71005.known	chr19	+	511	1	FSM	ENSG00000273420.1	ENST00000609744.1	511	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTGCCTCTGCGTCCTTT	33207118	False	NA	18	True	AATACA	-12	NA	33207128	33207639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33207100_33207600
transcript_71009.known	chr19	+	3730	2	FSM	ENSG00000153879.9	ENST00000284000.9	3730	2	0	0	0	0	multi-exon	FALSE	canonical	3	641	junction_1	0	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTCTTTCATCGTGGCTT	33368691	True	NA	18	True	AATAAA	-21	NA	33373708	33382686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33373896_33379143
transcript_7101.known	chr1	+	848	7	FSM	ENSG00000137955.16	ENST00000470201.5	848	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	179.554773444391	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATGGAAGGCCGGAGAAG	75786670	True	NA	NA	False	NA	NA	NA	75786699	75792286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75786866_75787496_75787605_75789158_75789357_75789951_75790058_75791284_75791338_75791460_75791572_75792180
transcript_71012.known	chr19	-	1929	16	FSM	ENSG00000124299.15	ENST00000588328.6	1929	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	249.99463105346	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTGTGCGTGGCTTCCC	-33515125	True	NA	-2	True	AATAAA	-17	NA	33521749	33386951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33396089_33396156_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_71013.known	chr19	-	1804	16	FSM	ENSG00000124299.15	ENST00000651901.1	1804	16	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	249.321265305095	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTAAAATGATTGAAAATAAT	-33515132	True	NA	NA	False	ATTAAA	-9	NA	33521756	33387107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387654_33387745_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_71016.known	chr19	-	1907	15	FSM	ENSG00000124299.15	ENST00000244137.12	1907	15	0	0	0	0	multi-exon	TRUE	canonical	3	649	junction_14	49.8649707321928	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTGCGTGGCTTCCCCT	-33515167	True	NA	0	True	AATAAA	-19	NA	33521791	33386949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_7102.known	chr1	+	2137	10	FSM	ENSG00000137955.16	ENST00000471759.5	2137	10	0	0	0	0	multi-exon	FALSE	canonical	1	163	junction_3	166.116722313254	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAGACCGGTATTTTATTT	75786671	True	NA	12	True	AATAAA	-26	NA	75786700	75794803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75787605_75789158_75789357_75789951_75790058_75790151_75790275_75790445_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_71021.known	chr19	-	1638	13	FSM	ENSG00000124299.15	ENST00000436370.7	1638	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_11	201.841040315283	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTCTGATACTTTCTG	-33515164	True	NA	-74	True	ACTAAA	-42	NA	33521788	33387023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33462994_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33512592_33512777_33521743
transcript_71022.known	chr19	-	1754	13	FSM	ENSG00000124299.15	ENST00000397032.8	1754	13	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	195.926573547904	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGCAATAAAAGGTTTCC	-33515167	True	NA	-30	True	NA	NA	NA	33521791	33386979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33387482_33387889_33388082_33391294_33391480_33401720_33401870_33411671_33411750_33413574_33413644_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_71029.known	chr19	-	1020	9	FSM	ENSG00000124299.15	ENST00000651646.1	1020	9	0	0	0	0	multi-exon	FALSE	canonical	3	649	junction_8	54.2008706110889	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCCATTATGTCTGCTG	-33515134	True	NA	NA	False	AGTAAA	-26	NA	33521758	33462643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_33463042_33463986_33464063_33478045_33478091_33489995_33490058_33493289_33493338_33500937_33501002_33511027_33511156_33512592_33512777_33521743
transcript_7103.known	chr1	+	3863	7	FSM	ENSG00000137955.16	ENST00000496055.5	3863	7	0	0	0	0	multi-exon	TRUE	canonical	1	208	junction_6	158.604066782665	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTGAAGTCCTGTTATTC	75777534	True	NA	42	True	AATAAA	-27	NA	75786196	75794833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75786275_75787496_75790518_75791284_75791338_75791460_75791572_75792180_75792307_75794083_75794234_75794509
transcript_71033.known	chr19	+	2040	1	FSM	ENSG00000277013.1	ENST00000610908.1	2040	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCTTCCTTCCTACCAAT	33906075	True	NA	18	True	AATAAA	-21	NA	33906351	33908391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_33906400_33908400
transcript_71034.known	chr19	+	3431	10	FSM	ENSG00000257103.9	ENST00000544216.8	3431	10	0	0	0	0	multi-exon	TRUE	canonical	3	730	junction_9	113.516301108184	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172503	34229288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34227364
transcript_71035.known	chr19	+	3424	11	FSM	ENSG00000257103.9	ENST00000433627.9	3424	11	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_10	257.744078496481	546	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGTCAAAGTTCTTTCT	NA	False	NA	23	True	AATAAA	-17	NA	34172567	34229288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34172764_34194477_34194642_34196633_34196764_34208928_34209052_34215123_34215301_34215595_34215662_34219390_34219574_34219705_34219878_34221506_34221739_34226407_34226465_34227364
transcript_7104.known	chr1	+	569	4	FSM	ENSG00000137955.16	ENST00000462042.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	233.098453209988	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTGGAATATGTTAAAGG	75786669	True	NA	NA	False	AATAAA	-1	NA	75786698	75789996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_75786917_75787496_75787605_75789158_75789357_75789951
transcript_71041.known	chr19	+	632	4	FSM	ENSG00000166398.14	ENST00000588470.5	632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	30.554141381416	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCCAGAAAAAAAGAACAGCG	34253424	True	NA	NA	False	NA	NA	NA	34254551	34320016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34254615_34299678_34299924_34300754_34300969_34319906
transcript_71042.known	chr19	+	856	2	FSM	ENSG00000166398.14	ENST00000592124.1	856	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCATGTATTGCTGCAGTGC	NA	False	NA	NA	False	NA	NA	NA	34265557	34300470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34265622_34299678
transcript_71043.known	chr19	+	6680	14	FSM	ENSG00000166398.14	ENST00000299505.8	6680	14	0	0	0	0	multi-exon	TRUE	canonical	3	56	junction_1	15.9344069686884	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGTATCCTTGTTTAAAA	34253426	True	NA	NA	False	ATTAAA	-19	NA	34254553	34355566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34254615_34299678_34300969_34319906_34320117_34327420_34327562_34327770_34327867_34327989_34328152_34330188_34330348_34333703_34333802_34339866_34339993_34341421_34342456_34347876_34348043_34349015_34349154_34351513_34351593_34352646
transcript_7105.nnic	chr1	+	583	3	NNC	ENSG00000184005.11	novel	6836	5	NA	NA	-54	-259401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTACTCCTTACTCCC	76072554	True	NA	NA	False	AATAAA	-23	NA	76074691	76153602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_76074885_76152227_76152393_76153377
transcript_71051.known	chr19	+	4125	18	FSM	ENSG00000105220.17	ENST00000356487.11	4125	18	0	0	0	0	multi-exon	TRUE	canonical	3	1405	junction_10	169.402675409765	2307	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTTGCTTTGTGTGTTT	34363858	False	NA	28	True	AATAAA	-20	NA	34365195	34402413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34365389_34366344_34366436_34366782_34366852_34368582_34368703_34377502_34377587_34377734_34377882_34378933_34379006_34379517_34379563_34381465_34381520_34393247_34393309_34393727_34393772_34393913_34394067_34396300_34396431_34396580_34396658_34399206_34399336_34399555_34399632_34399718_34399786_34399900
transcript_7106.nnic	chr1	+	558	3	NNC	ENSG00000184005.11	novel	6836	5	NA	NA	-48	-259401	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGACTTACTCCTTACTCCC	76072560	True	NA	NA	False	AATAAA	-23	NA	76074697	76153602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_76074885_76152246_76152393_76153377
transcript_71072.known	chr19	+	1157	7	FSM	ENSG00000126249.8	ENST00000246535.4	1157	7	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.4112770527204	1669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTGTATGTACCTTAT	34400662	True	NA	10	True	ATTAAA	-20	NA	34404398	34426168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34404539_34404648_34404816_34404929_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_71085.known	chr19	+	1227	6	FSM	ENSG00000126249.8	ENST00000587385.6	1227	6	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	28.0670625466934	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAATGTTTACATCCAAATA	34400688	True	NA	-8	True	ATTAAA	-2	NA	34404424	34426150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34404539_34404648_34404991_34409160_34409511_34413736_34413848_34421518_34421668_34425989
transcript_71095.known	chr19	-	442	2	FSM	ENSG00000267024.1	ENST00000592220.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATAATTCATCTGGGTCTT	-34428252	True	NA	NA	False	AATAAA	-20	NA	34428273	34426111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34426402_34428121
transcript_71097.known	chr19	+	4005	17	FSM	ENSG00000126261.13	ENST00000246548.9	4005	17	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	87.2288656351784	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTGTTCCTTGTGTAAT	34402917	True	NA	26	True	ACTAAA	-19	NA	34428380	34471251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34428571_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644_34438767_34443843_34443912_34444999_34445122_34450264_34450365_34451980_34452148_34454259_34454354_34454443_34454557_34458768_34458925_34460469_34460567_34464025_34464132_34466877_34467015_34469039
transcript_7110.nnic	chr1	+	1753	2	NNC	ENSG00000117069.15	novel	2055	5	NA	NA	9607	-4816	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAACTGTGTCTGTGTGT	77005011	True	NA	NA	False	AATAAA	-33	NA	77005063	77045500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_77005520_77044203
transcript_71106.known	chr19	+	754	7	FSM	ENSG00000126261.13	ENST00000607361.5	754	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	338.718007919403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGAGTGTATATTTCT	34402888	True	NA	NA	False	NA	NA	NA	34428351	34438764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34428571_34430092_34430187_34430575_34430660_34431860_34431932_34433347_34433413_34434867_34434969_34438644
transcript_71109.known	chr19	+	344	3	FSM	ENSG00000126261.13	ENST00000592841.5	344	3	0	0	0	0	multi-exon	FALSE	canonical	3	646	junction_1	68	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTATTAAACAGTGGTGGT	34403020	True	NA	NA	False	TTTAAA	-18	NA	34428483	34432033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34428571_34430575_34430660_34431860
transcript_71112.known	chr19	-	612	3	FSM	ENSG00000268751.2	ENST00000687185.1	712	3	96	4	-36	0	multi-exon	FALSE	canonical	3	29	junction_1	15.5	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCAGCTTCTGTGTGTGTTC	-34577105	True	NA	-6	True	AATAAA	-15	NA	34577701	34576732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34576995_34577265_34577457_34577542
transcript_71117.nic	chr19	+	650	5	NIC	ENSG00000089335.22	novel	578	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_4	96.2064836692413	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	34674105	True	NA	NA	False	NA	NA	NA	34677646	34684172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_71118.known	chr19	+	2600	5	FSM	ENSG00000089335.22	ENST00000457781.6	2600	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	69.2147924940904	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTCTGTGACTGTTTG	34674120	True	NA	26	True	AATAAA	-40	NA	34677661	34686397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677834_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_71119.known	chr19	+	675	5	FSM	ENSG00000089335.22	ENST00000506901.5	675	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.8018722871473	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	34674112	True	NA	NA	False	NA	NA	NA	34677653	34684172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677863_34678736_34678814_34682776_34682898_34683151_34683239_34683991
transcript_71120.nic	chr19	+	2633	5	NIC	ENSG00000089335.22	novel	2590	5	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	99.3261672471056	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	34674110	True	NA	20	True	AATAAA	-34	NA	34677651	34686391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34677863_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_71121.known	chr19	+	578	5	FSM	ENSG00000089335.22	ENST00000502743.5	578	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	108.030088401334	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATTCCACTGTAGAAGC	34674105	True	NA	NA	False	NA	NA	NA	34677646	34684137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677797_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_71123.known	chr19	+	2955	5	FSM	ENSG00000089335.22	ENST00000505365.2	2955	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	102.436260669745	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	34674294	False	NA	25	True	AATAAA	-39	NA	34677835	34686396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34683991
transcript_71124.known	chr19	+	2853	5	FSM	ENSG00000089335.22	ENST00000505242.6	2853	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	82.1016899947863	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTCTCTGTGACTGTTT	34674136	True	NA	25	True	AATAAA	-39	NA	34677677	34686396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34678104_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_71130.nic	chr19	+	1697	3	ISM	ENSG00000089335.22	ENST00000506901.5	675	5	-2	-13	-2	13	intron_retention	FALSE	canonical	0	0	junction_1	117	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	34674110	True	NA	NA	False	AGTAAA	-12	NA	34677651	34684185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_34677863_34678736_34678814_34682776
transcript_71131.known	chr19	+	2590	5	FSM	ENSG00000089335.22	ENST00000423823.6	2590	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	99.3261672471056	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGAACTCTTTCTCTGTGAC	34674147	True	NA	20	True	AATAAA	-34	NA	34677688	34686391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34677857_34678736_34678814_34682776_34682898_34683154_34683239_34684251
transcript_71132.known	chr19	-	540	1	FSM	ENSG00000274104.1	ENST00000612269.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	53	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCTGAGAGAGACAGGGAG	-34733644	False	193	1	True	ATTAAA	-23	NA	34733837	34733297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34733300_34733800
transcript_71133.known	chr19	+	498	5	FSM	ENSG00000197841.15	ENST00000593781.5	498	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	24.4783067224839	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCTAAGAAGAATTTGG	34733043	True	NA	NA	False	AATAGA	-31	NA	34734262	34740725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34734361_34734969_34735047_34739147_34739269_34739522_34739610_34740610
transcript_71138.nic	chr19	+	2726	5	NIC	ENSG00000197841.15	novel	567	5	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_3	23.6999472573253	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTCACTGTGACTATTT	34732971	True	NA	24	True	AATAAA	-40	NA	34734190	34742872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34734361_34734969_34735047_34739147_34739269_34739525_34739622_34740610
transcript_71139.known	chr19	+	499	4	FSM	ENSG00000197841.15	ENST00000599244.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	24.8327740429189	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTCATGGTGAACGAG	NA	False	NA	NA	False	NA	NA	NA	34734154	34739620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34734361_34734969_34735047_34739147_34739269_34739525
transcript_71142.nic	chr19	-	1100	4	ISM	ENSG00000153896.19	ENST00000673783.1	1327	5	-23	1924	1	0	5prime_fragment	FALSE	non_canonical	0	0	junction_3	22.2910046630673	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	-34772922	True	NA	5	True	AATAAA	-30	NA	34773214	34766967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_34767412_34769428_34769556_34772335_34772474_34772823
transcript_71143.known	chr19	-	948	3	FSM	ENSG00000153896.19	ENST00000588760.1	948	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	3.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTCGTTTTGTTTTGTTTT	-34772908	True	NA	5	True	AATAAA	-30	NA	34773200	34766967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34767412_34769428_34769556_34772823
transcript_71145.known	chr19	-	3226	5	FSM	ENSG00000153896.19	ENST00000673678.1	3226	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	20.0686322403895	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGCATGTTTGTGTAATGT	-34772915	True	NA	NA	False	AATAAA	-13	NA	34773207	34758078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34760560_34767315_34767412_34769428_34769556_34772335_34772474_34772823
transcript_71149.known	chr19	+	801	5	FSM	ENSG00000269086.3	ENST00000665910.1	801	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTGAGTTCCTGGTTCTTTC	NA	False	NA	NA	False	NA	NA	NA	34839076	34850928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34839163_34839598_34839787_34841725_34841849_34848965_34849133_34850691
transcript_7115.known	chr1	-	4601	11	FSM	ENSG00000142892.15	ENST00000370812.8	4601	11	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_6	27.0916961447599	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGGAAAGGTGGCAGTGTC	-77216175	True	NA	-5	True	ATTAAA	-18	NA	77219430	77088988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77169259_77169396_77206639_77206732_77210435_77210490_77219309
transcript_71153.known	chr19	-	872	4	FSM	ENSG00000271109.2	ENST00000603718.2	872	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	3.74165738677394	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGGGTCTCATATTTT	-34860224	True	NA	-4	True	AATAAA	-15	NA	34860566	34849050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860448
transcript_71155.known	chr19	-	939	4	FSM	ENSG00000271109.2	ENST00000665881.1	939	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	13.4246870437348	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860715	34849047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668_34850795_34860173_34860303_34860533
transcript_71158.known	chr19	-	874	3	FSM	ENSG00000271109.2	ENST00000661859.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	28.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGTCTCATATTTTTAG	NA	False	NA	-1	True	AATAAA	-18	NA	34860691	34849047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34860173_34860303_34860448
transcript_71160.known	chr19	-	847	3	FSM	ENSG00000271109.2	ENST00000653487.1	847	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	11.5	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860747	34849045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34860173_34860303_34860533
transcript_71161.known	chr19	-	1142	3	FSM	ENSG00000271109.2	ENST00000657506.1	1142	3	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	3	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860685	34849045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668_34850795_34860173
transcript_71162.nnic	chr19	-	777	3	NIC	ENSG00000271109.2	novel	1142	3	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_2	4.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGGGTCTCATATTTT	NA	False	NA	-4	True	AATAAA	-15	NA	34860685	34849050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_34849550_34850668_34850795_34860533
transcript_71163.known	chr19	-	1046	2	FSM	ENSG00000271109.2	ENST00000655389.1	1046	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGTCTCATATTTTTAGTT	NA	False	NA	1	True	AATAAA	-20	NA	34860715	34849045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34860173
transcript_71164.known	chr19	-	628	2	FSM	ENSG00000271109.2	ENST00000657568.1	628	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACGGGTCTCATATTTTT	-34850454	False	NA	-3	True	AATAAA	-16	NA	34850796	34849049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34849550_34850668
transcript_71165.known	chr19	+	1657	2	FSM	ENSG00000269037.1	ENST00000595783.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATTCATATGTAAATATGT	34905290	False	NA	11	True	ATTAAA	-13	NA	34905314	34908188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34906225_34907441
transcript_71167.nic	chr19	+	2583	6	NIC	ENSG00000168661.15	novel	2583	6	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_3	7.65767588763066	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926495	True	NA	5	True	AATAAA	-20	NA	34926982	34945168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34942593_34942674_34943222
transcript_71168.known	chr19	+	2583	6	FSM	ENSG00000168661.15	ENST00000601957.5	2583	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	6.7705243519243	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926492	True	NA	5	True	AATAAA	-20	NA	34926979	34945168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34942593_34942674_34943222
transcript_71171.known	chr19	+	2579	5	FSM	ENSG00000168661.15	ENST00000303586.11	2579	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	10.1334840997556	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAACCACTGCTGAACTTCA	34926415	True	NA	1	True	AATAAA	-16	NA	34926902	34945164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_71172.known	chr19	+	2580	5	FSM	ENSG00000168661.15	ENST00000601142.2	2580	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	9.44722181384559	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCACTGCTGAACTTCAAATA	34926415	True	NA	5	True	AATAAA	-20	NA	34926902	34945168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927217_34929883_34929957_34931842_34931994_34933627_34933724_34943222
transcript_71173.known	chr19	+	2651	5	FSM	ENSG00000168661.15	ENST00000439785.5	2651	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	11.8400802362146	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTGCTGAACTTCAAATAAT	34926415	True	NA	7	True	AATAAA	-22	NA	34926902	34945170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_34927283_34929883_34929957_34931842_34931994_34933624_34933724_34943222
transcript_71176.nic	chr19	+	2648	19	NIC	ENSG00000089351.15	novel	2277	9	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	33	junction_1	406.678343032129	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGGCTGTGCCTGTGGG	35001056	False	NA	13	True	AATAAA	-13	NA	35001079	35026469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35001245_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283_35010380_35011473_35011555_35013255_35013369_35013540_35013692_35014188_35014388_35015823_35015968_35019190_35019310_35019390_35019534_35021501_35021606_35021690_35021865_35021950_35022039_35023235_35023344_35023426_35023548_35026048
transcript_71184.known	chr19	+	808	6	FSM	ENSG00000089351.15	ENST00000424536.2	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	1675	junction_1	131.298134030915	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGCCCCTCCCTTCGTAA	35000411	False	NA	28	True	AGTAAA	-25	NA	35000455	35010639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35000487_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_71185.known	chr19	+	582	6	FSM	ENSG00000089351.15	ENST00000598073.5	582	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	731.657734189969	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCCCAACGCCATCCAGA	35000837	True	NA	NA	False	NA	NA	NA	35001139	35010339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35001245_35009118_35009330_35009422_35009444_35009887_35009973_35010091_35010196_35010283
transcript_71189.known	chr19	-	565	3	FSM	ENSG00000269303.1	ENST00000600959.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGCTTCAGGTCCTTTTT	-35000089	False	81	NA	False	AATAGA	-17	NA	35000170	34998232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_34998602_34999396_34999498_35000075
transcript_71192.known	chr19	+	1666	6	FSM	ENSG00000105711.14	ENST00000262631.11	1666	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	8.13879597975032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATAGTTTCGATTGTGAG	35030257	True	NA	16	True	AATAAA	-16	NA	35030469	35040449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35030861_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_71193.known	chr19	+	1176	6	FSM	ENSG00000105711.14	ENST00000596348.2	1176	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.5292276202302	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGTGGGAGGGGGCAGGGG	35031327	False	NA	NA	False	NA	NA	NA	35031352	35039922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35031781_35032527_35032695_35033498_35033740_35039116_35039259_35039634_35039707_35039796
transcript_71195.nic	chr19	+	1928	13	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-37	0	combination_of_known_junctions	TRUE	canonical	3	19	junction_1	29.3115449382435	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040617	True	NA	20	True	AATAAA	-16	NA	35041683	35066573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35041873_35042307_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_71204.nnic	chr19	+	1707	12	NIC	ENSG00000105707.15	novel	1746	13	NA	NA	-31	0	combination_of_known_splicesites	FALSE	canonical	3	26	junction_1	28.4747241840087	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040623	True	NA	20	True	AATAAA	-16	NA	35041689	35066573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_35041873_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_71217.known	chr19	+	758	10	FSM	ENSG00000089356.19	ENST00000603181.5	758	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTGGAGACTTCCTAT	NA	False	NA	12	True	NA	NA	NA	35115940	35123657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35116041_35116263_35116360_35119167_35119252_35119362_35119417_35121077_35121111_35121221_35121246_35122764_35122840_35122917_35122955_35123270_35123309_35123440
transcript_71219.known	chr19	+	1404	8	FSM	ENSG00000089356.19	ENST00000344013.10	1404	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.87139303460597	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCATGCCGTTTTATCCCTC	NA	False	NA	1	True	AATAAA	-19	NA	35116261	35124323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35116360_35119167_35119252_35119362_35119417_35121077_35121111_35121221_35121246_35122764_35122955_35123270_35123309_35123440
transcript_71228.nnic	chr19	-	739	3	NNC	ENSG00000227392.2	novel	3218	5	NA	NA	15153	-27013	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCGCCGGTTCGTGTATTG	-35091020	False	NA	1	True	TATAAA	-21	NA	35091122	35086071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35086451_35086955_35087101_35090907
transcript_71229.nic	chr19	+	566	2	ISM	ENSG00000089356.19	ENST00000604621.5	548	8	4430	0	3597	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGCCTGGAGACTTCCTAT	35122944	False	NA	12	True	NA	NA	NA	35122959	35123657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35123309_35123440
transcript_71230.known	chr19	+	1746	13	FSM	ENSG00000105707.15	ENST00000672452.2	1746	13	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	21.0277594304925	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGCCTCCGAGCTTACAA	35040654	True	NA	20	True	AATAAA	-16	NA	35041720	35066573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35041873_35042452_35042523_35049289_35049392_35049474_35049517_35059672_35059803_35059873_35059997_35060128_35060170_35060346_35060513_35060626_35060818_35065249_35065346_35065538_35065682_35065867_35066033_35066248
transcript_7124.known	chr1	-	4318	8	FSM	ENSG00000142892.15	ENST00000445065.5	4318	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	73.6339540135763	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATGGAAAGGTGGCAGTGT	-77216175	True	NA	-6	True	ATTAAA	-17	NA	77219430	77088989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77092491_77122274_77122360_77154448_77154622_77161294_77161406_77161593_77161712_77163845_77163943_77166718_77166831_77219309
transcript_71244.known	chr19	+	708	6	FSM	ENSG00000221946.8	ENST00000270310.7	708	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	23.2946345753695	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGTCTGTGTGTTCTCAT	35142441	True	NA	23	True	AATAAA	-24	NA	35143254	35154302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35143365_35148693_35148724_35151253_35151329_35151439_35151483_35151632_35151674_35153893
transcript_71245.known	chr19	-	1113	6	FSM	ENSG00000153902.14	ENST00000591633.2	1113	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_5	6.96850055607374	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTCGTTAAGTGCCAAGT	-35134841	False	NA	-2	True	TATAAA	-40	NA	35134863	35131083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35131556_35131788_35131861_35131970_35132043_35133692_35133765_35134032_35134105_35134510
transcript_71249.known	chr19	+	636	5	FSM	ENSG00000221946.8	ENST00000588265.1	636	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	20.6458228220626	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCCTGGGATCCGGGAGT	35142465	True	NA	NA	False	NA	NA	NA	35143278	35154143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35143365_35148693_35148724_35151253_35151483_35151632_35151674_35153893
transcript_71251.nic	chr19	+	412	4	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	534	3	534	0	3prime_fragment	FALSE	canonical	3	150	junction_3	9.62635271879577	1519	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTTTGTCGGTCTCGGTC	NA	False	NA	19	True	AATAAA	-20	NA	35141398	35143052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35141573_35142471_35142522_35142719_35142772_35142916
transcript_71253.nic	chr19	+	555	3	ISM	ENSG00000266964.6	ENST00000590462.1	620	5	534	5	534	0	intron_retention	FALSE	canonical	3	166	junction_1	3.5	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGCACTTTGTCGGTCTCGG	NA	False	NA	17	True	AATAAA	-18	NA	35141398	35143050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35141573_35142471_35142522_35142719
transcript_71254.known	chr19	+	898	9	FSM	ENSG00000089327.15	ENST00000541435.6	898	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	296.289949837992	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAAAGCACTGTGGTCTTT	35144529	True	NA	-5	True	GGGGCT	-34	NA	35154752	35169859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35154870_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_71255.known	chr19	+	892	9	FSM	ENSG00000089327.15	ENST00000423817.7	892	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	316.414260701063	672	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCAGGATCTCTGATCAT	35154742	False	NA	15	True	AGTAAA	-15	NA	35154941	35169879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35155033_35155550_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_71269.known	chr19	+	862	9	FSM	ENSG00000089327.15	ENST00000590686.5	862	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	317.064243293059	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTGTGGTCTTTGCCCCA	35144529	True	NA	1	True	AGTAAA	-1	NA	35154752	35169865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35154810_35155532_35155612_35157420_35157502_35158343_35158401_35160708_35160802_35164155_35164246_35166141_35166172_35166250_35166326_35169565
transcript_71273.nnic	chr19	+	1070	7	NNC	ENSG00000105699.17	novel	2105	9	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_5	478.434048630414	128	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTGGAGAGAACCATTTG	35236950	True	NA	14	True	AATAAA	-15	NA	35248997	35267964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35249132_35250314_35250660_35258944_35259065_35262545_35262693_35266358_35266442_35267634_35267735_35267823
transcript_71280.nnic	chr19	+	1011	4	NNC	ENSG00000105699.17	novel	658	4	NA	NA	-4	-1178	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	627.711717271551	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACATGCCTGTAGCCCTAGC	35236950	True	NA	23	True	ATTAAA	-23	NA	35248997	35261410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35249132_35250314_35250660_35258944_35259065_35260998
transcript_71285.known	chr19	+	1746	10	FSM	ENSG00000105698.16	ENST00000222305.8	1746	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	38.3235092081178	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTGTGTGTTTGTCCATC	35268851	False	NA	45	True	AATAAA	-28	NA	35268961	35279821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35269802_35270004_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
transcript_71286.known	chr19	+	1523	9	FSM	ENSG00000105698.16	ENST00000343550.9	1523	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	42.0251041045706	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTCTGCTTGTGTGTTTG	35268867	False	NA	39	True	AATAAA	-22	NA	35268977	35279815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35269164_35269445_35269493_35269580_35269700_35270446_35270598_35270717_35270806_35271082_35271142_35278697_35278793_35278945_35279075_35279166
transcript_7132.nnic	chr1	-	611	4	NNC	ENSG00000142892.15	novel	4601	11	NA	NA	-23	-35406	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	124.099422507386	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGCTTGTAATGTGCTTA	NA	False	NA	NA	False	CATAAA	-15	NA	77219453	77189899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_77190221_77206639_77206732_77210435_77210490_77219309
transcript_71350.known	chr19	-	970	14	FSM	ENSG00000161249.21	ENST00000462721.5	970	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	440.418856579472	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481317	True	NA	-2	True	AATAAA	-21	NA	35510439	35497219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_7140.nnic	chr1	-	568	2	Antisense	novelGene_ENSG00000226084.5_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5824	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGATAGTAAATATTTAAAG	NA	False	NA	NA	False	NA	NA	NA	77129711	77129077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_77129208_77129273
transcript_7142.nnic	chr1	+	588	2	Genic_Genomic	ENSG00000226084.5	novel	555	1	NA	NA	-36	53	multi-exon	FALSE	canonical	0	0	junction_1	0	5665	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAATAAATAAATAAATATT	77128580	True	NA	NA	False	AATAAA	-36	NA	77129077	77129721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_77129226_77129281
transcript_71433.known	chr19	-	593	12	FSM	ENSG00000161249.21	ENST00000472252.6	593	12	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	389.203934306089	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGCTCCTCCCCTTGGCCC	-35481303	True	NA	NA	False	NA	NA	NA	35510425	35497489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_7144.nnic	chr1	+	560	2	Genic_Genomic	ENSG00000226084.5	novel	555	1	NA	NA	-36	43	multi-exon	FALSE	canonical	0	0	junction_1	0	962	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	TAAAAATAAATAAATAAATA	77128580	True	NA	NA	False	AATAAA	-26	NA	77129077	77129711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_77129355_77129428
transcript_71452.known	chr19	-	877	12	FSM	ENSG00000161249.21	ENST00000467532.5	877	12	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	424.670801040286	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGACTTTCTCAAATTTT	-35481313	True	NA	-5	True	AATAAA	-18	NA	35510435	35497222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_7146.known	chr1	+	555	1	FSM	ENSG00000226084.5	ENST00000471722.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	63379	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	77128616	False	NA	NA	False	AAGAAA	-34	NA	77129113	77129668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77129100_77129700
transcript_7148.known	chr1	+	3280	14	FSM	ENSG00000154027.19	ENST00000354567.7	3280	14	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_11	6.6954015836889	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTCTTTTTCTATTTATT	77281731	True	NA	NA	False	AATAAA	-18	NA	77282018	77559966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77282374_77286940_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
transcript_71498.nic	chr19	-	957	11	NIC	ENSG00000161249.21	novel	970	14	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	530	junction_1	313.61033146247	851	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35510422	False	NA	-2	True	AATAAA	-21	NA	35510554	35497219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_7150.known	chr1	+	3929	14	FSM	ENSG00000154027.19	ENST00000344720.9	3929	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.28700816786866	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATAACTCTTTTTCTATT	77282314	False	NA	NA	False	AATAAA	-14	NA	77282601	77559962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77283612_77286942_77287128_77293792_77293961_77297558_77297729_77297833_77297948_77340376_77340569_77410980_77411072_77417638_77417716_77483316_77483360_77486307_77486353_77518563_77518728_77521826_77521944_77535846_77536039_77558601
transcript_71511.known	chr19	-	642	11	FSM	ENSG00000161249.21	ENST00000463292.5	642	11	0	0	0	0	multi-exon	FALSE	canonical	3	705	junction_6	296.607080158246	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGAGTGTCAGAGTGAGCC	-35481386	True	NA	NA	False	NA	NA	NA	35510508	35498716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_71513.known	chr19	-	1293	11	FSM	ENSG00000161249.21	ENST00000424570.6	1293	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	593.580626368482	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	-35513349	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_71542.known	chr19	-	1257	10	FSM	ENSG00000161249.21	ENST00000418261.5	1257	10	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	611.024478707889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTGAAATAAACCTTAGCTG	-35513349	False	NA	-30	True	AAAACA	-33	NA	35513481	35503330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_7155.known	chr1	-	6412	15	FSM	ENSG00000036549.13	ENST00000370801.8	6412	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_14	61.6852196764396	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTGAAGTTTGAAGCCTGT	-77682631	False	2189	-5	True	TATAAA	-19	NA	77682658	77562415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77565785_77566080_77566182_77568331_77568467_77576067_77576221_77578773_77578870_77579526_77579629_77580997_77581070_77581775_77581892_77581978_77582127_77584516_77584656_77631849_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77682584
transcript_71556.known	chr19	-	1111	9	FSM	ENSG00000161249.21	ENST00000451297.6	1111	9	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	629.337238191893	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGACAAGGAGCCACCA	-35513343	False	NA	-119	True	NA	NA	NA	35513475	35503419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35511410_35511594_35511762_35511814_35512420_35512478_35512589_35512791_35513049
transcript_71561.known	chr19	-	691	8	FSM	ENSG00000161249.21	ENST00000488762.5	691	8	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_5	349.281069206624	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	-35481320	True	NA	-3	True	AATAAA	-20	NA	35510442	35497220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35505717_35505766_35510183_35510253_35510378
transcript_71570.known	chr19	-	582	8	FSM	ENSG00000161249.21	ENST00000462538.5	582	8	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	605.703706107067	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35507457_35507512_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_71602.nic	chr19	-	536	6	NIC	ENSG00000161249.21	novel	582	8	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	719	junction_3	367.673442065102	1518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35510422	False	NA	-3	True	AATAAA	-17	NA	35510554	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_71610.known	chr19	-	441	5	FSM	ENSG00000161249.21	ENST00000480507.1	441	5	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_3	389.13774874715	3736	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510378
transcript_71615.known	chr19	-	370	5	FSM	ENSG00000161249.21	ENST00000470746.6	370	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	406.355370950108	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481314	True	NA	-3	True	AATAAA	-17	NA	35510436	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35509910_35509962_35510183_35510253_35510378
transcript_71617.known	chr19	-	306	4	FSM	ENSG00000161249.21	ENST00000474992.5	306	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	418.550939419432	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481301	True	NA	-3	True	AATAAA	-17	NA	35510423	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35510183_35510253_35510378
transcript_71622.known	chr19	-	935	13	FSM	ENSG00000161249.21	ENST00000402589.6	935	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_5	410.395566293464	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35481309	True	NA	-2	True	AATAAA	-21	NA	35510431	35497219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500377_35500420_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_71623.known	chr19	-	848	11	FSM	ENSG00000161249.21	ENST00000436012.5	848	11	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	316.055833675001	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACGACTTTCTCAAATTTTA	-35481317	True	NA	-4	True	AATAAA	-19	NA	35510439	35497221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_71624.known	chr19	-	762	8	FSM	ENSG00000161249.21	ENST00000460327.5	762	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	316.634276897057	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGACTTTCTCAAATTTTATT	-35473757	False	71	-2	True	AATAAA	-21	NA	35502879	35497219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829
transcript_71625.known	chr19	-	1579	12	FSM	ENSG00000161249.21	ENST00000490622.5	1579	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	415.887520553414	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACTTTCTCAAATTTTAT	-35481348	True	NA	-3	True	AATAAA	-20	NA	35510470	35497220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35497646_35497682_35498597_35498764_35498873_35498898_35499957_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510378
transcript_71626.known	chr19	-	867	12	FSM	ENSG00000161249.21	ENST00000414866.6	867	12	0	0	0	0	multi-exon	FALSE	canonical	3	530	junction_1	305.690601428393	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAAGGAGGAGCTTCCTAC	-35481348	True	NA	-67	True	NA	NA	NA	35510470	35497284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_71627.known	chr19	-	666	13	FSM	ENSG00000161249.21	ENST00000498211.5	666	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_9	441.797362737966	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTCAGAGTGAGCCG	-35481313	True	NA	NA	False	NA	NA	NA	35510435	35498715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510378
transcript_71628.known	chr19	-	827	13	FSM	ENSG00000161249.21	ENST00000467637.5	827	13	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_9	408.147406650533	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTCTGTACCTCCTCCCT	-35481324	True	NA	NA	False	NA	NA	NA	35510446	35497336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35497539_35498715_35498764_35498873_35498898_35499957_35500030_35500532_35500581_35502135_35502184_35502829_35502887_35505717_35505766_35505938_35505987_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_71629.known	chr19	-	567	4	FSM	ENSG00000161249.21	ENST00000461300.5	567	4	0	0	0	0	multi-exon	FALSE	canonical	3	806	junction_3	413.505609259281	2030	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481388	True	NA	-3	True	AATAAA	-17	NA	35510510	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183
transcript_7163.known	chr1	-	587	5	FSM	ENSG00000036549.13	ENST00000463166.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_4	27.7758888246623	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAAACGGCTTGGATGAA	-77681214	True	NA	NA	False	NA	NA	NA	77683403	77633311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77633406_77639448_77639603_77641383_77641447_77641521_77641656_77683261
transcript_71630.known	chr19	-	458	6	FSM	ENSG00000161249.21	ENST00000392206.6	458	6	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_3	381.930674337634	3963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTCCTGGCCTCTGCTCCT	-35481348	True	NA	-5	True	AATAAA	-15	NA	35510470	35503305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183_35510253_35510370
transcript_71631.known	chr19	-	414	5	FSM	ENSG00000161249.21	ENST00000488892.5	414	5	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_4	408.656946594573	2885	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481353	True	NA	-3	True	AATAAA	-17	NA	35510475	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35510183_35510253_35510370
transcript_71632.known	chr19	-	577	5	FSM	ENSG00000161249.21	ENST00000474928.5	577	5	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_3	392.557241048997	2334	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481347	True	NA	-3	True	AATAAA	-17	NA	35510469	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35509910_35509962_35510183
transcript_71633.known	chr19	-	449	3	FSM	ENSG00000161249.21	ENST00000476051.5	449	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	481	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35481318	True	NA	-3	True	AATAAA	-17	NA	35510440	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35510183
transcript_71634.known	chr19	-	510	8	FSM	ENSG00000161249.21	ENST00000458071.5	510	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	579.483689967867	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCCCCACACTCCTGGCC	-35481313	True	NA	-14	True	AATAAA	-6	NA	35510435	35503314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35508204_35508241_35509910_35509962_35510183_35510253_35510370
transcript_71635.known	chr19	-	351	4	FSM	ENSG00000161249.21	ENST00000595571.5	351	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	715.620476696039	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGCCTCTGCTCCTTT	-35510099	False	NA	-3	True	AATAAA	-17	NA	35510231	35503303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35506050_35510183
transcript_71636.known	chr19	-	364	7	FSM	ENSG00000161249.21	ENST00000450261.1	364	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	571.102053538206	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCCGTGACCTCCAGAC	-35481320	True	NA	NA	False	AAAACA	-42	NA	35510442	35503431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35503448_35505717_35505766_35505938_35505987_35506125_35506186_35509910_35509962_35510183_35510253_35510370
transcript_71637.nic	chr19	-	760	3	ISM	ENSG00000189001.11	ENST00000588674.5	593	4	2815	0	2815	0	3prime_fragment	FALSE	canonical	0	0	junction_2	0.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTCTCATTGTGGTCCC	NA	False	NA	NA	False	AATAAA	-13	NA	35525406	35523366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_35523534_35524710_35524756_35524858
transcript_71648.known	chr19	-	1421	4	FSM	ENSG00000236144.9	ENST00000444728.3	1547	4	4	122	4	0	multi-exon	FALSE	canonical	3	25	junction_3	47.7865624998865	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCACCTGGCCTCGTGTTTT	-35542674	True	NA	-26	True	NA	NA	NA	35545503	35540859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35541585_35541750_35542075_35542910_35543098_35545318
transcript_71653.known	chr19	-	3767	3	FSM	ENSG00000236144.9	ENST00000590717.2	3767	3	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	17	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGGAAGTGCTACCGCTG	-35542678	True	NA	-22	True	ATTAAA	-23	NA	35545507	35540738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35541585_35541750_35542075_35542910
transcript_71654.known	chr19	+	868	7	FSM	ENSG00000105677.12	ENST00000222284.10	868	7	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_5	53.3166640616859	4813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534720	True	NA	37	True	AGTAAA	-17	NA	35545625	35547526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_71655.known	chr19	+	669	5	FSM	ENSG00000105677.12	ENST00000593027.6	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_3	771.034167530856	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	35534694	True	NA	34	True	AGTAAA	-14	NA	35545599	35547523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35547118_35547241_35547323
transcript_71656.known	chr19	+	935	6	FSM	ENSG00000105677.12	ENST00000392204.6	935	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_4	52.0707211396193	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534724	True	NA	37	True	AGTAAA	-17	NA	35545629	35547526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545958_35546525_35546586_35546671_35546809_35546944_35547030_35547118_35547241_35547323
transcript_71657.known	chr19	+	1045	5	FSM	ENSG00000105677.12	ENST00000599895.1	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	1844	junction_1	48.411646326065	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCTGCCTCCATTTCTCT	35534768	True	NA	37	True	AGTAAA	-17	NA	35545673	35547526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547241_35547323
transcript_71658.known	chr19	+	986	6	FSM	ENSG00000105677.12	ENST00000477168.6	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	1818	junction_4	57.8086498717969	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTGTTGCTGCCTCCATTT	35534734	True	NA	33	True	AGTAAA	-13	NA	35545639	35547522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35545817_35545887_35545958_35546525_35546586_35546671_35547030_35547118_35547241_35547323
transcript_71659.known	chr19	+	1783	2	FSM	ENSG00000105677.12	ENST00000595467.1	1783	2	0	0	0	0	multi-exon	FALSE	canonical	3	1969	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTTGCTGCCTCCATTTC	35534752	True	NA	34	True	AGTAAA	-14	NA	35545657	35547523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35547241_35547323
transcript_71660.nnic	chr19	+	343	3	NNC	ENSG00000283907.1	novel	494	3	NA	NA	-343	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTCAAAATTTATTCC	NA	False	NA	NA	False	AATAAA	-20	NA	35557612	35581952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35557689_35575613_35575780_35581851
transcript_71661.nnic	chr19	+	368	3	NNC	ENSG00000283907.1	novel	494	3	NA	NA	-29	-2	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	5	102	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAATTTCAAAATTTATTCC	35557750	True	NA	NA	False	AATAAA	-20	NA	35557926	35581952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35558028_35575613_35575780_35581851
transcript_71663.known	chr19	+	494	3	FSM	ENSG00000283907.1	ENST00000638356.1	494	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATTTCAAAATTTATTCCTG	35557779	True	NA	NA	False	AATAAA	-22	NA	35557955	35581954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35558028_35575613_35575933_35581851
transcript_71664.known	chr19	-	568	2	FSM	ENSG00000267626.1	ENST00000589603.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGACCCTGATGCTGGAA	NA	False	NA	NA	False	NA	NA	NA	35612666	35608284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35608804_35612617
transcript_71667.known	chr19	+	4324	19	FSM	ENSG00000249115.9	ENST00000203166.10	4324	19	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	16.9098006500577	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTATTTCCCTAGTTAAG	35609301	True	NA	NA	False	AATAAA	-27	NA	35612734	35625355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35619759_35620011_35620124_35620194_35620328_35622600_35622734_35622875
transcript_7167.known	chr1	-	420	2	FSM	ENSG00000036549.13	ENST00000458763.2	420	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATTCTGTTTGTTTAG	-77682648	False	NA	NA	False	AATAAA	-9	NA	77682675	77676981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77677311_77682584
transcript_71670.known	chr19	+	2762	18	FSM	ENSG00000249115.9	ENST00000585968.5	2762	18	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	16.6729169364437	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACAGTGTAGGTTGGGGGT	35609318	True	NA	-46	True	NA	NA	NA	35612751	35623557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35612893_35613729_35613793_35613867_35613901_35614034_35614060_35615041_35615148_35615226_35615387_35617123_35617194_35617286_35617370_35617854_35617913_35618070_35618196_35618401_35618466_35618568_35618700_35618886_35619050_35619423_35619505_35619612_35620124_35620194_35620328_35622600_35622734_35622875
transcript_71678.known	chr19	+	1692	10	FSM	ENSG00000126254.12	ENST00000262633.9	1692	10	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_5	161.706028045255	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGGCTGGGCATGGAAG	35614587	True	NA	16	True	AATAAA	-17	NA	35629035	35637685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35632935_35633002_35633076_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_71685.known	chr19	+	1609	9	FSM	ENSG00000126254.12	ENST00000588161.5	1609	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	258.271629055535	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGGCTGGGCATGGAAGC	35614581	True	NA	17	True	AATAAA	-18	NA	35629029	35637686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631225_35631330_35631406_35633100_35633253_35633686_35634020_35634255_35634374_35637157_35637353_35637441
transcript_71696.known	chr19	+	771	5	FSM	ENSG00000126254.12	ENST00000586618.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_3	306.564022677156	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCCTGGCTGGGCATGGAA	35614619	True	NA	15	True	AATAAA	-16	NA	35629067	35637684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35629282_35629519_35629674_35631139_35631197_35637249_35637353_35637441
transcript_71709.known	chr19	+	435	4	FSM	ENSG00000126267.11	ENST00000392201.1	435	4	0	0	0	0	multi-exon	FALSE	canonical	2	69	junction_1	3269.2244748054	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCCAGGATCCTAAATCAT	35577579	False	NA	-27	True	NA	NA	NA	35648824	35658726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35648909_35651232_35651350_35654570_35654672_35658593
transcript_7171.known	chr1	-	4502	25	FSM	ENSG00000077254.14	ENST00000370793.5	4502	25	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_24	83.0687361800789	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTTGAATGTTGAATTT	-77753963	True	NA	-8	True	AATAAA	-17	NA	77759852	77695990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_71713.known	chr19	+	488	4	FSM	ENSG00000126267.11	ENST00000649813.2	488	4	0	0	0	0	multi-exon	FALSE	canonical	3	5835	junction_1	624.30174328338	104247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	35577077	True	NA	29	True	AATAAA	-19	NA	35648322	35658782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35648404_35651232_35651350_35654570_35654672_35658593
transcript_71714.known	chr19	+	290	2	FSM	ENSG00000126267.11	ENST00000590618.1	290	2	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0	734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGACTATGCGTGTGAAC	35651143	True	NA	25	True	AATAAA	-15	NA	35651244	35658778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35651350_35658593
transcript_71715.known	chr19	+	661	4	FSM	ENSG00000126267.11	ENST00000592141.6	661	4	0	0	0	0	multi-exon	FALSE	canonical	1	33	junction_1	3286.11330703411	5410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATGCGTGTGAACGGGC	35577394	False	NA	29	True	AATAAA	-19	NA	35648639	35658782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35648894_35651232_35651350_35654570_35654672_35658593
transcript_71716.nic	chr19	+	1013	5	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6362	-18	6362	0	3prime_fragment	FALSE	canonical	3	4	junction_1	14.2543852901484	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	NA	False	NA	NA	False	AATAAA	-22	NA	35673174	35678483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35673307_35673437_35673546_35675839_35676020_35677811_35677896_35677974
transcript_71727.nic	chr19	+	1010	4	ISM	ENSG00000105668.7	ENST00000222275.2	1223	7	6496	-18	6496	0	3prime_fragment	FALSE	canonical	3	24	junction_1	7.1336448530109	144	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	35673287	False	NA	NA	False	AATAAA	-22	NA	35673308	35678483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35673546_35675839_35676020_35677811_35677896_35677974
transcript_71728.nnic	chr19	+	952	4	NNC	ENSG00000105668.7	novel	1223	7	NA	NA	6496	-6	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	14.9666295470958	28	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATGAATGAGTTTTTTTT	35673287	False	NA	NA	False	AATAAA	-16	NA	35673308	35678477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35673546_35675839_35676020_35677811_35677896_35678026
transcript_7173.known	chr1	-	4327	24	FSM	ENSG00000077254.14	ENST00000370794.7	4327	24	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_11	71.0121265503454	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGAATGTTGAATTTATTT	-77753963	True	NA	-4	True	AATAAA	-21	NA	77759852	77695986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77697475_77697862_77697932_77701368_77701472_77711746_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_71730.nnic	chr19	+	968	4	NNC	ENSG00000105668.7	novel	1268	8	NA	NA	6749	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	15.9234278833282	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGAGTTTTTTTTTTTCTG	35673196	False	NA	NA	False	AATAAA	-22	NA	35673561	35678483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35673757_35675839_35676020_35677811_35677896_35677974
transcript_71733.nnic	chr19	-	1172	3	NNC	ENSG00000226510.2	novel	808	2	NA	NA	-241	0	intron_retention	FALSE	canonical	2	11	junction_1	0.5	97	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	NA	False	NA	-13	True	AATAAA	-14	NA	35673545	35667947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_35668686_35671832_35671956_35673234
transcript_71737.known	chr19	-	795	2	FSM	ENSG00000226510.2	ENST00000443196.2	808	2	13	0	13	0	multi-exon	FALSE	canonical	3	38	junction_1	0	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTGATGTGCACCTGTA	-35673118	True	NA	-13	True	AATAAA	-14	NA	35673291	35667947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35668686_35673234
transcript_7176.known	chr1	-	2917	22	FSM	ENSG00000077254.14	ENST00000370792.7	2917	22	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_8	86.1653475602658	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753963	True	NA	NA	False	AATAAA	-15	NA	77759852	77711651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_71767.nic	chr19	-	775	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_5	56.8350439625256	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745448	35742530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745188_35745347
transcript_71768.nic	chr19	-	821	7	NIC	ENSG00000161265.15	novel	1036	8	NA	NA	-3	0	combination_of_known_junctions	TRUE	canonical	3	54	junction_5	50.3336092707668	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	NA	False	NA	-9	True	AATAAA	-22	NA	35745448	35742530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35744625_35744739_35745124_35745188_35745347
transcript_7177.nic	chr1	-	2942	22	ISM	ENSG00000077254.14	ENST00000370793.5	4502	25	-1	15661	-1	0	5prime_fragment	FALSE	canonical	3	206	junction_21	80.261759969357	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753964	True	NA	NA	False	AATAAA	-15	NA	77759853	77711651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77745420_77745600_77759642
transcript_71774.known	chr19	-	561	6	FSM	ENSG00000161265.15	ENST00000591057.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	68.5372891205948	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGGTCCTGGCCACAACT	-35744521	True	NA	58	True	NA	NA	NA	35745418	35742463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742620_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745188_35745347
transcript_71787.known	chr19	-	975	6	FSM	ENSG00000161265.15	ENST00000592913.5	975	6	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	51.3809303146605	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	35745426	35742531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744422_35744625_35744739_35745124_35745188_35745347
transcript_71796.known	chr19	-	329	3	FSM	ENSG00000126246.10	ENST00000591748.1	329	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	46	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGGTATGGCCCATGGC	-35739652	False	897	NA	False	NA	NA	NA	35740549	35739527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35739627_35739709_35739770_35740379
transcript_71800.nic	chr19	-	998	3	ISM	ENSG00000126246.10	ENST00000592537.5	1195	5	1824	-2	-27	2	3prime_fragment	FALSE	canonical	3	73	junction_2	18.5	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCCCAGTATACAATTAGC	-35739726	False	NA	-24	True	AATAAA	-18	NA	35740623	35739251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_35739627_35739709_35740089_35740379
transcript_71802.known	chr19	-	782	2	FSM	ENSG00000126246.10	ENST00000592889.1	782	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCCTATTCCAACATACA	-35740438	False	NA	71	True	NA	NA	NA	35741335	35739156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35739627_35741023
transcript_71803.known	chr19	-	482	2	FSM	ENSG00000126246.10	ENST00000587101.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGCGGAGTCCCCAACACC	-35739699	False	897	NA	False	NA	NA	NA	35740596	35739823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35740089_35740379
transcript_71804.known	chr19	-	729	6	FSM	ENSG00000161265.15	ENST00000292879.9	729	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_4	53.5738742298893	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	NA	False	NA	-10	True	AATAAA	-21	NA	35745445	35742531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744422_35745124_35745213_35745347
transcript_71805.known	chr19	-	723	7	FSM	ENSG00000161265.15	ENST00000591084.5	723	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	67.3483894058021	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35743802	False	897	-5	True	AATAAA	-26	NA	35744699	35742526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743154_35743206_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625
transcript_71806.known	chr19	-	702	6	FSM	ENSG00000161265.15	ENST00000594792.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	59.6100662640128	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAACTTGCTTTTGCTGTGG	-35744260	False	NA	-9	True	AATAAA	-22	NA	35745157	35742530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35744625_35744693_35745124
transcript_71807.known	chr19	-	765	6	FSM	ENSG00000161265.15	ENST00000378975.8	765	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	55.5099990992614	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCTTTTGCTGTGGTTTG	-35744521	True	NA	-5	True	AATAAA	-26	NA	35745418	35742526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35745124_35745213_35745347
transcript_71808.known	chr19	-	1244	6	FSM	ENSG00000161265.15	ENST00000585554.5	1244	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	63.8510767332862	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	-35744500	True	NA	-7	True	AATAAA	-24	NA	35745397	35742528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744069_35744146_35744322_35744982_35745124_35745213_35745347
transcript_71809.known	chr19	-	1763	3	FSM	ENSG00000161265.15	ENST00000590135.5	1763	3	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_2	37	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	-35743763	False	897	-7	True	AATAAA	-24	NA	35744660	35742528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35743905_35744069_35744422_35744625
transcript_71810.known	chr19	-	455	6	FSM	ENSG00000161265.15	ENST00000601236.1	455	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	58.3623166092642	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTCCAGAGGCAGCTCTAT	-35744519	True	NA	NA	False	NA	NA	NA	35745416	35743848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35743905_35744069_35744146_35744322_35744422_35744625_35744693_35745124_35745213_35745347
transcript_71811.known	chr19	-	904	8	FSM	ENSG00000161265.15	ENST00000412391.6	904	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	57.8195645159692	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AACTTGCTTTTGCTGTGGTT	NA	False	NA	-7	True	AATAAA	-24	NA	35745442	35742528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742804_35743808_35743905_35744011_35744146_35744322_35744422_35744490_35744541_35744625_35744693_35745124_35745213_35745347
transcript_71812.known	chr19	-	525	7	FSM	ENSG00000161265.15	ENST00000589429.5	525	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	73.6645927309873	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAACTTGCTTTTGCTGTG	-35743790	False	897	-10	True	AATAAA	-21	NA	35744687	35742531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35742620_35743154_35743209_35743295_35743346_35743808_35743905_35744069_35744146_35744322_35744422_35744625
transcript_71814.known	chr19	+	1037	11	FSM	ENSG00000188223.9	ENST00000591613.2	1037	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	425.702760150789	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	35741973	True	NA	4	True	AGTAAA	-18	NA	35745677	35754519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_71817.known	chr19	+	935	9	FSM	ENSG00000267796.8	ENST00000301159.14	935	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	7.70957197255464	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGGTGTCTGCTCCGGTCCC	35748239	True	NA	4	True	AGTAAA	-18	NA	35748575	35754519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35748759_35752175_35752252_35752433_35752485_35752803_35752834_35752913_35753000_35753086_35753254_35754016_35754158_35754245_35754320_35754392
transcript_7182.nic	chr1	-	2754	21	NIC	ENSG00000077254.14	novel	2917	22	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	179	junction_8	70.9294543895553	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753979	True	NA	NA	False	AATAAA	-15	NA	77759868	77711651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721902_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_71835.known	chr19	+	1124	4	FSM	ENSG00000205155.8	ENST00000587708.7	1124	4	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	150.169533823905	4437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTTGACCATCCATC	35741946	True	NA	22	True	AATAAA	-26	NA	35745650	35747519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745834_35745992_35746418_35746524_35746707
transcript_71840.known	chr19	+	603	4	FSM	ENSG00000205155.8	ENST00000222266.2	603	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	538.453959653624	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGACTTCCTGGGATCTT	35741914	True	NA	21	True	AATAAA	-17	NA	35745618	35747004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745872_35745992_35746418_35746524_35746707
transcript_71846.known	chr19	+	833	3	FSM	ENSG00000205155.8	ENST00000591949.1	833	3	0	0	0	0	multi-exon	FALSE	canonical	3	902	junction_1	182.5	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACTTTCGATACTGACTT	35741895	True	NA	10	True	AATAAA	-6	NA	35745599	35746993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35745701_35745834_35745992_35746418
transcript_7185.nic	chr1	-	2778	21	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-16	15665	-16	0	5prime_fragment	FALSE	canonical	3	234	junction_8	62.6921047660708	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTTGTAATAGATTTCAAG	-77753979	True	NA	NA	False	AATAAA	-15	NA	77759868	77711651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77711856_77713199_77713282_77714613_77714784_77715741_77715869_77717866_77718048_77718595_77718642_77721171_77721206_77721830_77721926_77722023_77722197_77723330_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_71852.known	chr19	-	585	2	FSM	ENSG00000267439.1	ENST00000585365.1	585	2	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATTAATAATCATTTATGC	-35748267	False	NA	NA	False	NA	NA	NA	35748288	35747056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35747482_35748128
transcript_71853.known	chr19	+	772	5	FSM	ENSG00000167595.15	ENST00000537459.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	11.409973707244	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGAGAGAGAGAGAGAACCA	35755903	True	NA	NA	False	ACTAAA	-15	NA	35758193	35762563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762252
transcript_71855.known	chr19	+	1266	5	FSM	ENSG00000167595.15	ENST00000536950.5	1266	5	0	0	0	0	multi-exon	TRUE	canonical	3	21	junction_1	8.30662386291807	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTAGAGCTGATCCCCATT	35755888	True	NA	NA	False	AAAAAG	-1	NA	35758178	35763045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35758227_35759373_35759471_35759788_35759992_35762018_35762147_35762255
transcript_71862.known	chr19	+	612	4	FSM	ENSG00000167595.15	ENST00000545674.5	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	7.48331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGTGACATCCCCATTCA	35756996	False	NA	NA	False	AATAAA	-1	NA	35759286	35762352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35759471_35759788_35759992_35762018_35762147_35762255
transcript_71863.known	chr19	+	650	3	FSM	ENSG00000167595.15	ENST00000421853.6	650	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	6	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGCCTGGGCACCGTG	35755907	True	NA	NA	False	TTTAAA	-13	NA	35758197	35762745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35758227_35762018_35762147_35762252
transcript_71871.nnic	chr19	+	2062	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	69	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	36.4267301121946	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35870233	False	NA	6	True	AATAAA	-17	NA	35870252	35879792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35870302_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_71873.nnic	chr19	+	2302	16	NNC	ENSG00000105290.13	novel	1179	8	NA	NA	98	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	35.8500581124587	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGTCTGAGTCTCTGTG	35870247	True	NA	6	True	AATAAA	-17	NA	35870281	35879792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35870571_35870895_35871029_35871236_35871350_35871611_35871746_35871857_35872037_35872482_35872614_35873638_35873714_35874503_35874663_35874740_35874870_35876516_35876617_35877717_35877826_35878084_35878109_35878583_35878655_35878889_35878953_35879073_35879218_35879342
transcript_71882.nic	chr19	+	1788	6	ISM	ENSG00000126259.20	ENST00000360202.10	2980	15	4424	0	4229	0	3prime_fragment	FALSE	canonical	3	32	junction_1	5.85149553533112	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35861261	True	NA	11	True	AATAAA	-19	NA	35861334	35867136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35861642_35861804_35862025_35862492_35862598_35862926_35863037_35864647_35864714_35866156
transcript_71883.nic	chr19	+	1683	5	ISM	ENSG00000126259.20	ENST00000592409.5	2563	14	4748	-636	4229	0	3prime_fragment	FALSE	canonical	3	7	junction_2	15.0083310198036	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCTTAGGGAGTCTAC	35861261	True	NA	11	True	AATAAA	-19	NA	35861334	35867136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_35861642_35861804_35862025_35862926_35863037_35864647_35864714_35866156
transcript_71885.known	chr19	+	586	5	FSM	ENSG00000105290.13	ENST00000589743.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	52.4738029877767	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCCCCAAGCTCCCATAC	35869894	False	NA	NA	False	NA	NA	NA	35870183	35871996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35870251_35870895_35871029_35871236_35871350_35871611_35871746_35871857
transcript_71886.known	chr19	-	1834	12	FSM	ENSG00000167604.15	ENST00000396901.5	1834	12	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_11	6.14023446937028	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCGTTCCCAGAAACCCAG	NA	False	NA	NA	False	NA	NA	NA	35900650	35888240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35888613_35889889_35890055_35890373_35890491_35895979_35896129_35896217_35896270_35896391_35896539_35896725_35896832_35896912_35897059_35897650_35897857_35898471_35898533_35898718_35898823_35900441
transcript_71891.nnic	chr19	+	653	5	NNC	ENSG00000126264.10	novel	564	4	NA	NA	-3275	1	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.65698400254929	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCGTATTCTTTCTCA	NA	False	NA	11	True	AATAAA	-15	NA	35899253	35904271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35899453_35902532_35902637_35903350_35903417_35903771_35903904_35904119
transcript_71894.nnic	chr19	+	536	4	NNC	ENSG00000126264.10	novel	564	4	NA	NA	-3262	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.23609564462324	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTCGTATTCTTTCTCA	NA	False	NA	11	True	AATAAA	-15	NA	35899266	35904271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_35899453_35903350_35903417_35903771_35903904_35904119
transcript_71897.known	chr19	+	445	4	FSM	ENSG00000126264.10	ENST00000437550.2	445	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	4.08248290463863	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTAGTCGTATTCTTTCTC	35902448	True	NA	10	True	AATAAA	-14	NA	35902537	35904270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35902637_35903350_35903417_35903771_35903904_35904122
transcript_71898.known	chr19	-	541	4	FSM	ENSG00000011600.12	ENST00000424586.7	541	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGCCAGATCCTTGGGCT	NA	False	NA	NA	False	AATAAA	-18	NA	35908295	35904400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35904635_35907217_35907262_35907445_35907581_35908167
transcript_71899.known	chr19	-	575	5	FSM	ENSG00000011600.12	ENST00000262629.9	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTATGCCAGATCCTTGGG	NA	False	NA	NA	False	AATAAA	-16	NA	35908295	35904402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_35904635_35907217_35907265_35907445_35907581_35907729_35907763_35908167
transcript_71900.known	chr19	+	1125	1	FSM	ENSG00000205138.4	ENST00000378887.4	1125	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCCTGTTGGTGGTCTTA	35992935	True	NA	4	True	AATAAA	-17	NA	35995187	35996312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_35995200_35996300
transcript_71902.known	chr19	-	1377	8	FSM	ENSG00000181392.17	ENST00000324444.9	1377	8	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	64.5742730094105	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36004665	False	4148	-32	True	AATAAA	-18	NA	36008813	36003306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_71903.known	chr19	-	1175	8	FSM	ENSG00000181392.17	ENST00000490730.1	1175	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	78.162833696256	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004645	False	4148	-35	True	AATAAA	-15	NA	36008793	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006601_36006672_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_71910.nnic	chr19	-	1243	7	NIC	ENSG00000181392.17	novel	1377	8	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	39	junction_6	82.0861674637627	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004685	False	4148	-35	True	AATAAA	-15	NA	36008833	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36006749_36006945_36007124_36007269_36008553
transcript_71917.nnic	chr19	-	1151	7	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	85.9762564122599	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004691	False	NA	-35	True	AATAAA	-15	NA	36008839	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006749_36006945_36007124_36007269_36008216_36008368_36008553
transcript_71925.known	chr19	-	1004	6	FSM	ENSG00000181392.17	ENST00000340477.9	1004	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	94.0799659863884	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004634	False	4148	-35	True	AATAAA	-15	NA	36008782	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008216_36008368_36008553
transcript_71933.nnic	chr19	-	956	6	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	92.0686700240641	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004691	False	NA	-35	True	AATAAA	-15	NA	36008839	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36007124_36007269_36008216_36008368_36008553
transcript_71939.known	chr19	-	610	5	FSM	ENSG00000239382.11	ENST00000475223.5	610	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	94.6295408421704	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGGTGGGGGTTGTGGACT	-36010087	True	NA	NA	False	NA	NA	NA	36014235	36010737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36011078_36011403_36011465_36013020_36013090_36013343_36013423_36014174
transcript_71943.nnic	chr19	-	898	5	NIC	ENSG00000181392.17	novel	1004	6	NA	NA	-14	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	103.410287205867	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004679	False	4148	-35	True	AATAAA	-15	NA	36008827	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36006422_36006672_36008553
transcript_71948.nnic	chr19	-	799	5	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-20	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	115.438295205707	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004685	False	4148	-35	True	AATAAA	-15	NA	36008833	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36007124_36007269_36008553
transcript_71950.nic	chr19	-	812	5	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	20	junction_3	98.5884754928283	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004691	False	NA	-35	True	AATAAA	-15	NA	36008839	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008216_36008368_36008553
transcript_71959.nic	chr19	-	650	4	NIC	ENSG00000181392.17	novel	1175	8	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_3	111.493896195661	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004680	False	4148	-35	True	AATAAA	-15	NA	36008828	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36003521_36003612_36003672_36005332_36005438_36008553
transcript_7196.nic	chr1	-	1587	12	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-16	27423	-16	-5386	5prime_fragment	FALSE	canonical	3	287	junction_11	56.026558047158	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAGAAATACAGAAGTGTTA	-77753979	True	NA	NA	False	AAAACA	-4	NA	77759868	77723409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77723444_77725621_77725763_77728294_77728713_77729859_77729939_77730617_77730732_77734346_77734417_77736055_77736159_77739264_77739418_77740876_77740940_77741375_77741430_77741616_77741749_77759642
transcript_71974.known	chr19	-	713	3	FSM	ENSG00000181392.17	ENST00000505054.2	713	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGAAGATACTAGGTGC	-36004462	False	NA	-32	True	AATAAA	-18	NA	36008610	36003306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36005332_36005438_36008216
transcript_71976.known	chr19	-	382	3	FSM	ENSG00000181392.17	ENST00000397428.8	382	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3.5	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGTGTGAAGATACTAGG	-36004471	False	NA	-35	True	AATAAA	-15	NA	36008619	36003309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36003521_36005332_36005438_36008553
transcript_71981.known	chr19	-	3350	14	FSM	ENSG00000105270.15	ENST00000360535.9	3350	14	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_12	5.24206924227718	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGTCGGGTCATTGG	-36032162	True	NA	-4	True	AATAAA	-16	NA	36032873	36014659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36016213_36016906_36016980_36017385_36017451_36017654_36017779_36017847_36017992_36018897_36019027_36019170_36019307_36024395_36024633_36026146_36026266_36026585_36026748_36026951_36027046_36027131_36027272_36032191_36032416_36032723
transcript_71983.known	chr19	+	1672	10	FSM	ENSG00000075702.19	ENST00000681542.1	1672	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	73.3178434819213	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGTAGAGTTTATCAATTA	36048504	True	NA	7	True	AATAAA	-15	NA	36054896	36075418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36055149_36058779_36058872_36059967_36060031_36065957_36066016_36066256_36066428_36067305_36067444_36067827_36068011_36071555_36071717_36073341_36073532_36075054
transcript_71994.nnic	chr19	+	567	4	NNC	ENSG00000267698.2	novel	643	4	NA	NA	-40	4192	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_3	11.8133634311129	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAGGTTTACTTTCTTGA	36013854	True	NA	NA	False	NA	NA	NA	36014452	36023720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36014587_36016811_36016961_36019233_36019385_36023587
transcript_71996.known	chr19	+	643	4	FSM	ENSG00000267698.2	ENST00000586962.1	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	10.8730042868667	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	36013909	True	NA	NA	False	NA	NA	NA	36014507	36045972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36014587_36016811_36016961_36019233_36019385_36045708
transcript_71998.nnic	chr19	+	724	4	NNC	ENSG00000267698.2	novel	643	4	NA	NA	-40	5142	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	13.6950923894494	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAATCGTGTGTGTGTTTGGG	36013854	True	NA	NA	False	AATAAA	-15	NA	36014452	36051114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36014587_36016811_36016961_36019233_36019385_36050824
transcript_72.known	ERCC-00148	+	478	1	FSM	ERCC-00148A	DQ883642	478	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00148_+_0_500
transcript_72000.known	chr19	-	1349	4	FSM	ENSG00000161277.11	ENST00000292894.2	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	19.4821855949366	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36054275	False	1046	-1	True	AATAAA	-21	NA	36054285	36034983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36035593_36039322_36039719_36039943_36040137_36054134
transcript_72001.nic	chr19	-	1339	4	NIC	ENSG00000161277.11	novel	1349	4	NA	NA	-88	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_3	46.5044800709208	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCGATGAGTGCTATAAAGAC	-36054479	False	NA	-1	True	AATAAA	-21	NA	36054489	36034983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36035593_36039322_36039719_36039943_36040137_36054348
transcript_72003.nnic	chr19	+	514	3	NIC	ENSG00000267698.2	novel	643	4	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAATAAAGGGAGAAATAAGA	36013889	True	NA	NA	False	NA	NA	NA	36014487	36045972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36014587_36019233_36019385_36045708
transcript_72004.nnic	chr19	+	905	3	NIC	ENSG00000267698.2	novel	643	4	NA	NA	-24	372	combination_of_known_splicesites	FALSE	canonical	3	5	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCAGTCTCAGGTAGTT	36013870	True	NA	6	True	ATTAAA	-18	NA	36014468	36046344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36014587_36019233_36019385_36045708
transcript_72006.nic	chr19	+	578	3	FSM	ENSG00000267698.2	ENST00000685157.1	538	3	-40	0	-40	0	multi-exon	FALSE	canonical	3	28	junction_2	1	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTGCCCTGTCTCATATA	36013854	True	NA	NA	False	NA	NA	NA	36014452	36019528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36014587_36016811_36016961_36019233
transcript_72007.known	chr19	-	1084	3	FSM	ENSG00000161277.11	ENST00000522483.2	1084	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	61.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCATACCTGGTTCTAAGGA	-36053331	True	NA	NA	False	NA	NA	NA	36054377	36035147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36035593_36039322_36039719_36054134
transcript_72009.known	chr19	-	433	2	FSM	ENSG00000105270.15	ENST00000586457.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGGGGAGGGTGGGCTGTGC	-36032175	True	NA	NA	False	NA	NA	NA	36032886	36032145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36032416_36032723
transcript_7201.nic	chr1	-	997	4	ISM	ENSG00000077254.14	ENST00000370794.7	4327	24	-16	44368	-16	-957	5prime_fragment	FALSE	canonical	3	287	junction_3	83.5078173320052	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTATATCCAGATATTTGA	-77753979	True	NA	NA	False	NA	NA	NA	77759868	77740354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77740940_77741375_77741430_77741616_77741749_77759642
transcript_72018.known	chr19	+	1067	7	FSM	ENSG00000105254.12	ENST00000651435.1	1067	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	751.504213782819	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	36106829	True	NA	37	True	ATTAAA	-20	NA	36115505	36125945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36124249_36124364_36125450_36125524_36125667
transcript_72029.known	chr19	+	724	6	FSM	ENSG00000105254.12	ENST00000589996.5	724	6	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_4	580.169630366844	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGACACCTAAGGAATTCCC	36106842	True	NA	NA	False	NA	NA	NA	36115518	36125778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121670_36125450_36125524_36125667
transcript_72030.known	chr19	+	987	6	FSM	ENSG00000105254.12	ENST00000221855.8	987	6	0	0	0	0	multi-exon	FALSE	canonical	3	1478	junction_2	77.6649212965545	4561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAGTATTTAGAGGACTTC	36106791	True	NA	33	True	ATTAAA	-16	NA	36115467	36125941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115675_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_7204.known	chr1	+	6409	16	FSM	ENSG00000180488.16	ENST00000443751.3	6409	16	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_14	8.19647620762863	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTCTTGCTGATGTATTGA	77778855	True	NA	2	True	AATAAA	-12	NA	77779623	77879539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
transcript_72046.known	chr19	+	875	6	FSM	ENSG00000105254.12	ENST00000585746.1	875	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	645.153439113518	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTAGAGGACTTCATGA	36115818	False	NA	37	True	ATTAAA	-20	NA	36115837	36125945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36115929_36116040_36116185_36120709_36120807_36121526_36121719_36125450_36125524_36125667
transcript_7205.known	chr1	+	5563	16	FSM	ENSG00000180488.16	ENST00000646892.1	5563	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.51256479025972	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGTAAAACTCTGTCTCAA	77778994	False	NA	NA	False	NA	NA	NA	77779762	77878376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77780193_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77873000_77873121_77874845
transcript_72053.known	chr19	-	744	6	FSM	ENSG00000105258.9	ENST00000586439.1	744	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_5	902.639374279673	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATTCCATGCGTGAGTTTT	-36112704	True	NA	-17	True	AATAAA	-5	NA	36115213	36113723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114819
transcript_72059.known	chr19	-	368	5	FSM	ENSG00000105258.9	ENST00000585842.5	368	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	969.314448463449	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGAGTTTTCTGTGTTTAT	-36101549	True	NA	-7	True	AATAAA	-15	NA	36114860	36113713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114797
transcript_7206.known	chr1	+	1978	15	FSM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	9.9121138007995	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCAGCTCACATTATTCC	77778861	True	NA	NA	False	AATAAA	-16	NA	77779629	77868636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77779737_77783237_77783352_77801330_77801509_77803269_77803407_77806974_77807102_77813733_77813868_77815107_77815232_77843306_77843408_77858937_77859057_77859313_77859387_77860039_77860127_77861223_77861323_77863893_77864029_77866337_77866392_77868247
transcript_72061.known	chr19	+	675	4	FSM	ENSG00000105261.8	ENST00000633214.2	683	4	8	0	8	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCATGGAATCTGGTGTTTA	36110719	False	NA	NA	False	AATAAA	-14	NA	36111150	36113711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36111297_36111368_36111434_36112759_36112965_36113452
transcript_72064.known	chr19	-	542	5	FSM	ENSG00000105258.9	ENST00000589591.5	542	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	98.8366708261665	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTTTTCTGTGTTTATTTGC	-36101580	True	NA	-3	True	AATAAA	-19	NA	36114891	36113709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658
transcript_72065.known	chr19	-	443	6	FSM	ENSG00000105258.9	ENST00000221859.9	443	6	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	89.8563297714746	13091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTGTGTTTATTTGCC	-36101564	True	NA	-2	True	AATAAA	-20	NA	36114875	36113708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114413_36114658_36114714_36114797
transcript_72066.known	chr19	-	993	5	FSM	ENSG00000105258.9	ENST00000586789.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	2086	junction_1	97.2329676601511	335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCATGCGTGAGTTTTC	-36112684	True	NA	-16	True	AATAAA	-6	NA	36115193	36113722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114176_36114252_36114338_36114714_36114797
transcript_72067.known	chr19	-	493	6	FSM	ENSG00000105258.9	ENST00000592962.5	493	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	895.113043140362	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTGAGTTTTCTGTGTTT	-36101595	True	NA	-9	True	AATAAA	-13	NA	36114906	36113715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36113818_36114014_36114067_36114150_36114252_36114338_36114413_36114658_36114714_36114797
transcript_72072.nic	chr19	+	1264	10	NIC	ENSG00000126247.11	novel	690	8	NA	NA	110	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	209.978011782422	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36141230	False	NA	24	True	AATAAA	-24	NA	36141412	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36141565_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_72073.nnic	chr19	+	1313	10	NNC	ENSG00000126247.11	novel	690	8	NA	NA	133	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	216.72261385934	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36141303	True	NA	24	True	AATAAA	-24	NA	36141435	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36141637_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_72074.nic	chr19	+	1208	10	NIC	ENSG00000126247.11	novel	570	8	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	211.509915711875	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36141561	True	NA	24	True	AATAAA	-24	NA	36141587	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36141684_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146313_36149577_36149637_36149812
transcript_72078.known	chr19	+	578	6	FSM	ENSG00000126247.11	ENST00000589146.5	578	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	316.977854116025	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTGTCTGCAGTCACAT	36139929	False	NA	NA	False	NA	NA	NA	36139952	36149912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36140158_36140996_36141076_36146036_36146055_36146195_36146313_36149577_36149637_36149812
transcript_72081.nnic	chr19	+	833	4	NNC	ENSG00000126247.11	novel	1389	10	NA	NA	25	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	306.966158105779	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36139997	False	NA	24	True	AATAAA	-24	NA	36140039	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36140158_36140996_36141112_36149577_36149637_36149812
transcript_72086.nnic	chr19	+	552	3	NNC	ENSG00000126247.11	novel	1389	10	NA	NA	25	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_2	106.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36139997	False	NA	24	True	AATAAA	-24	NA	36140039	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36140158_36140996_36141103_36150025
transcript_72088.known	chr19	+	799	5	FSM	ENSG00000126247.11	ENST00000629983.2	799	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	319.90232884429	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36140983	True	NA	24	True	AATAAA	-24	NA	36141011	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36141076_36146036_36146055_36146195_36146313_36149577_36149637_36149812
transcript_72089.known	chr19	+	592	9	FSM	ENSG00000126247.11	ENST00000590049.5	592	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	220.306604531049	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGATCTGCCTCCTGATCT	36140976	False	NA	24	True	AATAAA	-24	NA	36141158	36150353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36141221_36142299_36142334_36142651_36142742_36142908_36142967_36143063_36143129_36145805_36145875_36145975_36146055_36146195_36146291_36150313
transcript_72091.known	chr19	-	340	4	FSM	ENSG00000161281.11	ENST00000292907.8	340	4	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0.471404520791032	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGTCTGTGTTTGTGTC	-36152145	False	NA	NA	False	AATAAA	-13	NA	36152447	36150921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36151035_36151461_36151547_36151668_36151756_36152392
transcript_72092.known	chr19	-	211	4	FSM	ENSG00000161281.11	ENST00000589154.1	211	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGGCTGGGCCTCCTTCC	-36152134	False	NA	NA	False	NA	NA	NA	36152436	36151012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36151035_36151461_36151547_36151695_36151756_36152392
transcript_72096.known	chr19	-	1799	5	FSM	ENSG00000196357.12	ENST00000304116.10	1799	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_4	5.3851648071345	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCTAAGCATCAGATAATCT	-36214337	True	NA	8	True	AATAAA	-32	NA	36214665	36182275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214621
transcript_72097.known	chr19	-	1931	5	FSM	ENSG00000196357.12	ENST00000392173.6	1931	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	6.78232998312527	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCACTCACTGTTTC	-36215057	True	NA	-10	True	AATAAA	-14	NA	36215081	36182293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36201976_36202051_36214887
transcript_72100.nnic	chr19	+	3334	4	NIC	ENSG00000167635.12	novel	3347	4	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_1	471.780551622138	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36215064	True	NA	16	True	ATTAAA	-20	NA	36215077	36238768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36215156_36218121_36218196_36228747_36228820_36235658
transcript_72103.known	chr19	+	3347	4	FSM	ENSG00000167635.12	ENST00000443387.3	3347	4	0	0	0	0	multi-exon	FALSE	canonical	3	479	junction_1	321.45951879237	653	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAATCTGTTTTAATTAT	36206186	True	NA	16	True	ATTAAA	-20	NA	36215105	36238768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36215197_36218121_36218196_36228747_36228820_36235658
transcript_72106.known	chr19	-	1217	4	FSM	ENSG00000196357.12	ENST00000591473.1	1217	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.9938250421547	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGCGAATCCACACTGGTG	-36214849	False	NA	NA	False	NA	NA	NA	36214873	36182991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36183734_36194232_36194329_36195029_36195157_36214621
transcript_72107.known	chr19	+	533	3	FSM	ENSG00000167635.12	ENST00000591063.5	533	3	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	541	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACTCATATGTTGCATTT	36206176	True	NA	NA	False	NA	NA	NA	36215095	36236059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36215156_36228747_36228820_36235658
transcript_72109.known	chr19	+	565	3	FSM	ENSG00000167635.12	ENST00000586094.5	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	453	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTCATATGTTGCATTTC	36206186	True	NA	NA	False	NA	NA	NA	36215105	36236060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36215197_36228747_36228820_36235658
transcript_7213.nnic	chr1	+	1983	3	NNC	ENSG00000180488.16	novel	1978	15	NA	NA	0	-72446	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	18	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCACAGGCTTATCTTGTA	77778861	True	NA	NA	False	TATAAA	-2	NA	77779629	77789769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_77779737_77783237_77783352_77788007
transcript_7214.nnic	chr1	+	718	3	NNC	ENSG00000180488.16	novel	1978	15	NA	NA	0	-73711	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	18	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTGTTTGTATCTTTTTT	77778861	True	NA	NA	False	TTTAAA	-12	NA	77779629	77788504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_77779737_77783237_77783352_77788007
transcript_72141.nic	chr19	-	1107	7	FSM	ENSG00000232677.10	ENST00000691592.1	1103	7	-20	16	-5	-10	multi-exon	FALSE	canonical	3	113	junction_5	300.960130249839	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	NA	False	NA	-14	True	ATTAAA	-16	NA	36331761	36313076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_72145.known	chr19	-	1581	7	FSM	ENSG00000232677.10	ENST00000658126.2	1581	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	311.553856589123	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTTGGCAAAGTCATTT	-36315068	True	NA	-31	True	NA	NA	NA	36331662	36313093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_7215.nic	chr1	+	336	3	ISM	ENSG00000180488.16	ENST00000645756.1	1978	15	0	67191	0	-60770	5prime_fragment	FALSE	canonical	3	31	junction_2	4.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTACCATGGGAACCAGAG	77778861	True	NA	NA	False	AAGAAA	-24	NA	77779629	77801445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77779737_77783237_77783352_77801330
transcript_72160.known	chr19	-	669	7	FSM	ENSG00000232677.10	ENST00000676298.1	669	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	325.588185698847	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGTAGGATGGTCTCGATC	-36315137	True	NA	NA	False	NA	NA	NA	36331731	36320571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322223_36330252_36330493_36331446_36331454_36331687
transcript_72166.known	chr19	-	1003	6	FSM	ENSG00000232677.10	ENST00000449434.8	1019	6	0	16	0	-10	multi-exon	FALSE	canonical	3	105	junction_4	326.427327287407	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACCTGGGCTGGAATAGG	-36315159	True	NA	-14	True	ATTAAA	-16	NA	36331753	36313076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313323_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_72168.known	chr19	-	2038	6	FSM	ENSG00000232677.10	ENST00000585356.6	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	339.137376294622	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGACAATTGTGCCTTCT	-36315113	True	NA	NA	False	AAGAAA	-20	NA	36331707	36312585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36313913_36315956_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_7217.known	chr1	+	3282	13	FSM	ENSG00000162614.19	ENST00000334785.12	3282	13	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	10.6809799800081	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTCTGTATTTTAAGAC	77888589	True	NA	11	True	AATAAA	-20	NA	77888623	77943895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77888760_77916054_77916134_77917565_77917758_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_72170.known	chr19	-	1657	6	FSM	ENSG00000232677.10	ENST00000658042.1	1657	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	350.954469981506	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATATATAGACGAATTAGG	-36315105	True	NA	NA	False	TTTAAA	-17	NA	36331699	36315173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36316071_36316177_36316349_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_72171.known	chr19	-	1571	6	FSM	ENSG00000232677.10	ENST00000659786.2	1571	6	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_4	318.210873478579	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGTGTTTATTGACTC	-36315140	True	NA	NA	False	GGGGCT	-2	NA	36331734	36315219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_72180.nnic	chr19	-	1038	6	NNC	ENSG00000232677.10	novel	1749	6	NA	NA	-5	0	intron_retention	FALSE	canonical	0	0	junction_1	338.794923220523	122	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCTTACAGTCTTTCTTTT	NA	False	NA	-5	True	AATAAA	-15	NA	36331761	36319710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36320037_36321334_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_72181.known	chr19	-	1749	6	FSM	ENSG00000232677.10	ENST00000590622.5	1749	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	326.633372452969	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGATAGCTTACAGTCTTT	-36315124	True	NA	-10	True	AATAAA	-10	NA	36331718	36319715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36320761_36321299_36321358_36321992_36322031_36322129_36322226_36330252_36330493_36331446
transcript_72188.known	chr19	-	3581	5	FSM	ENSG00000232677.10	ENST00000666182.3	3595	5	14	0	7	0	multi-exon	FALSE	canonical	3	105	junction_3	348.121386875325	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAATAGGGCTCTTGGCT	-36315093	True	NA	-4	True	ATTAAA	-26	NA	36331687	36313066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36316071_36321299_36321358_36321992_36322031_36330252_36330493_36331446
transcript_7219.known	chr1	+	3195	12	FSM	ENSG00000162614.19	ENST00000330010.12	3195	12	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	4.78288961380578	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTCTTTCTGTATTTTA	77888211	True	NA	7	True	AATAAA	-16	NA	77888514	77943891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822_77936045_77942022_77942209_77942460
transcript_72205.known	chr19	-	2540	4	FSM	ENSG00000232677.10	ENST00000658991.1	2540	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	407.520415303195	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-36315140	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325765_36326052_36327226_36330252_36330493_36331446
transcript_72207.known	chr19	-	2111	4	FSM	ENSG00000232677.10	ENST00000668768.1	2111	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	393.500811802071	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCTTCATGTGTCTCAAAG	-36315140	True	NA	-22	True	AATAAA	-4	NA	36331734	36324925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325765_36326481_36327226_36330252_36330493_36331446
transcript_72210.known	chr19	+	952	4	FSM	ENSG00000267053.8	ENST00000586345.6	952	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAATGTTTTTTTTGG	NA	False	NA	NA	False	ATTAAA	-13	NA	36304563	36312660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36304813_36310994_36311389_36311622_36311793_36312521
transcript_72217.known	chr19	-	1397	3	FSM	ENSG00000232677.10	ENST00000651681.2	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	338	junction_1	310.5	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGCGTTTTCTCTAACT	-36315151	True	NA	-3	True	AATAAA	-23	NA	36331745	36324906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325765_36330252_36330493_36331446
transcript_72219.known	chr19	-	1233	3	FSM	ENSG00000232677.10	ENST00000662398.1	1233	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	476.5	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-36314872	False	NA	-20	True	AATAAA	-6	NA	36331466	36324923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36325897_36330252_36330493_36331446
transcript_72220.known	chr19	-	2856	3	FSM	ENSG00000232677.10	ENST00000591372.3	2868	3	2	10	-1	6	multi-exon	FALSE	canonical	3	223	junction_1	368	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTCTCAAAGTGTGGCGT	-36315160	True	NA	-14	True	AATAAA	-12	NA	36331754	36324917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36327226_36330252_36330493_36331446
transcript_72221.known	chr19	-	2797	3	FSM	ENSG00000232677.10	ENST00000666458.1	2797	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	447.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGTGTCTCAAAGTG	-36315162	False	NA	-20	True	AATAAA	-6	NA	36331756	36324923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36327171_36330252_36330493_36331446
transcript_72222.known	chr19	-	2047	2	FSM	ENSG00000232677.10	ENST00000661195.1	2047	2	0	0	0	0	multi-exon	FALSE	canonical	3	959	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTATGTTCAAATCTT	-36315100	True	NA	64	True	NA	NA	NA	36331694	36328693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36330493_36331446
transcript_72224.nnic	chr19	-	955	5	NNC	ENSG00000142065.14	novel	7491	5	NA	NA	-14	-2356	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	11.6726175299288	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATAGACTATGTAGAAATG	-36377454	True	NA	NA	False	AATAAA	-23	NA	36379215	36336808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36337397_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_72225.known	chr19	-	7491	5	FSM	ENSG00000142065.14	ENST00000270001.12	7491	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	6.86931583201704	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTATTTTTTAATTT	-36377440	True	NA	1	True	AATAAA	-20	NA	36379201	36334452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36341591_36360434_36360534_36362111_36362239_36367883_36367972_36379162
transcript_72229.nic	chr19	-	705	4	ISM	ENSG00000142065.14	ENST00000270001.12	7491	5	-14	25644	-14	15	5prime_fragment	FALSE	canonical	3	28	junction_3	7.78888096369861	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGATTTCTTGAAAAGATCA	-36377454	True	NA	NA	False	AATAAA	-22	NA	36379215	36360096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_36360534_36362111_36362239_36367883_36367972_36379162
transcript_72230.known	chr19	-	642	3	FSM	ENSG00000142065.14	ENST00000589280.1	642	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	11.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAATAAAGCCAAAAATTGAT	NA	False	NA	NA	False	AATAAA	-45	NA	36367973	36360111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36360537_36362111_36362239_36367883
transcript_72234.known	chr19	-	5197	5	FSM	ENSG00000186017.16	ENST00000434377.6	5197	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	13.4629120178363	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488269	True	NA	2	True	AATAAA	-19	NA	36489435	36445118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489412
transcript_72235.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000424129.7	5207	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	8.347903928532	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488340	True	NA	2	True	AATAAA	-19	NA	36489506	36445118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489473
transcript_72236.known	chr19	-	5207	5	FSM	ENSG00000186017.16	ENST00000452939.7	5250	5	43	0	1	0	multi-exon	FALSE	canonical	3	17	junction_4	9.54921462739214	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTCATTTATTTTC	-36488352	True	NA	2	True	AATAAA	-19	NA	36489518	36445118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36450002_36472910_36473007_36473331_36473459_36476548_36476617_36489485
transcript_7224.nic	chr1	+	1686	10	ISM	ENSG00000162614.19	ENST00000330010.12	3195	12	-44	7783	-42	138	5prime_fragment	FALSE	canonical	3	22	junction_6	5.05769185632935	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGGCTTTGAAATAAGTT	77888422	False	NA	NA	False	AATAAA	-15	NA	77888470	77936108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281_77933480_77935822
transcript_72243.known	chr19	-	925	2	FSM	ENSG00000186017.16	ENST00000494354.1	925	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCGAATTCCTGACCTCA	-36489629	False	NA	NA	False	NA	NA	NA	36489902	36476108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36476617_36489485
transcript_72245.known	chr19	-	5285	3	FSM	ENSG00000254004.7	ENST00000523638.6	5285	3	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_2	11	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTCAGTTGTTTTTATTT	-36525365	True	NA	-1	True	AATAAA	-22	NA	36528271	36510686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36515700_36525154_36525374_36528218
transcript_72248.nnic	chr19	-	1487	2	NIC	ENSG00000254004.7	novel	5285	3	NA	NA	-27	-2514	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACATCACTTATTGTACAT	-36525392	True	NA	2	True	AATAAA	-23	NA	36528298	36514292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_36515700_36528218
transcript_72250.known	chr19	-	330	2	FSM	ENSG00000254004.7	ENST00000520608.2	330	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTGGGGTTTTTTTGTTTG	-36525359	True	NA	NA	False	GATAAA	-45	NA	36528265	36525090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36525374_36528218
transcript_72254.known	chr19	-	5238	6	FSM	ENSG00000186020.13	ENST00000334116.7	5238	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	16.4681510801911	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGTCTATGGCATTTTCTT	-36571504	True	NA	-2	True	AATAAA	-19	NA	36573288	36543615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36548323_36551876_36551978_36554669_36554797_36556103_36556198_36572332_36572393_36573139
transcript_7226.known	chr1	+	1263	9	FSM	ENSG00000162614.19	ENST00000401035.7	1263	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	5.085211401702	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAAGAAGAAAAACGACGA	77888209	True	NA	NA	False	ATTAAA	-9	NA	77888512	77933384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77888760_77916054_77916134_77917959_77918039_77918124_77918274_77925187_77925230_77926413_77926612_77926715_77926893_77929315_77929505_77933281
transcript_72270.nic	chr19	+	712	5	NIC	ENSG00000233527.10	novel	1033	5	NA	NA	44	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_4	6.64736790015417	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36572555	True	NA	6	True	ATTAAA	-20	NA	36573420	36594708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573556_36574820_36574901_36593845_36593932_36594155_36594300_36594441
transcript_72277.known	chr19	+	1033	5	FSM	ENSG00000233527.10	ENST00000475219.6	1033	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	5.3851648071345	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36573049	True	NA	6	True	ATTAAA	-20	NA	36573069	36594708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594155_36594300_36594441
transcript_72279.known	chr19	+	8336	5	FSM	ENSG00000161298.19	ENST00000292928.7	8336	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.76070773396762	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAGCAGTACCTCCTGA	36604496	True	NA	4	True	AATAAA	-24	NA	36605312	36634114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36605348_36607551_36607623_36609901_36610054_36610649_36610743_36626129
transcript_72281.known	chr19	+	2742	5	FSM	ENSG00000161298.19	ENST00000439428.5	2742	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	10.256095748383	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAATAAACGTGACATTG	36604518	True	NA	NA	False	AATATA	-42	NA	36605334	36628567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36605348_36607551_36607623_36609926_36610054_36610649_36610743_36626129
transcript_72285.nnic	chr19	+	769	4	NNC	ENSG00000233527.10	novel	1004	3	NA	NA	0	13	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	15.1510909031513	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTACTACCCACTCTTT	36572511	True	NA	16	True	AATAAA	-31	NA	36573376	36577928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573556_36574820_36574901_36577140_36577238_36577515
transcript_72287.nnic	chr19	+	552	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	9	-1472	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	12.657891697365	183	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36572489	True	NA	13	True	AATAAA	-17	NA	36573354	36580340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573556_36574820_36574901_36577140_36577238_36580166
transcript_72291.known	chr19	+	2080	4	FSM	ENSG00000233527.10	ENST00000670019.1	2080	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	14.7271480229163	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCTATAGAACCATAAGCTAA	36572479	True	NA	NA	False	NA	NA	NA	36573344	36581812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573556_36574820_36574901_36577140_36577284_36580166
transcript_72293.known	chr19	+	452	4	FSM	ENSG00000233527.10	ENST00000592880.6	452	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	8.28653526310404	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36572671	False	NA	6	True	ATTAAA	-20	NA	36573536	36594708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573556_36574820_36574901_36593845_36593932_36594441
transcript_72296.nnic	chr19	+	563	4	NNC	ENSG00000233527.10	novel	2080	4	NA	NA	-31	-1472	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_3	12.7627931460511	136	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36573293	False	NA	13	True	AATAAA	-17	NA	36573313	36580340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36573526_36574820_36574901_36577140_36577238_36580166
transcript_72299.nic	chr19	+	546	4	NIC	ENSG00000233527.10	novel	2080	4	NA	NA	0	-1472	combination_of_known_junctions	FALSE	canonical	3	6	junction_3	14.7044966667419	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36572511	True	NA	13	True	AATAAA	-17	NA	36573376	36580340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573526_36574820_36574901_36577140_36577284_36580166
transcript_72301.nic	chr19	+	645	4	FSM	ENSG00000233527.10	ENST00000687100.1	617	4	-32	4	-31	0	multi-exon	FALSE	canonical	2	6	junction_3	6.97614984548545	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGAAGTTTTGGGGTGG	36573293	False	NA	6	True	ATTAAA	-20	NA	36573313	36594708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573526_36574820_36574901_36593845_36593932_36594441
transcript_72310.nnic	chr19	-	1075	4	NNC	ENSG00000186020.13	novel	2674	3	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.16024689946929	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCAGGCAAGTCCTTC	-36605008	False	NA	NA	False	ATTAAA	-21	NA	36605286	36580250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36581022_36587401_36587458_36589614_36589702_36605125
transcript_72314.nnic	chr19	+	380	3	NIC	ENSG00000233527.10	novel	2080	4	NA	NA	53	-1472	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	13	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36572564	True	NA	13	True	AATAAA	-17	NA	36573429	36580340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573556_36574820_36574901_36580166
transcript_72316.known	chr19	+	1004	3	FSM	ENSG00000233527.10	ENST00000448373.6	1004	3	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	9.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGGACATTAATTCAGTA	36572511	True	NA	3	True	AATAAA	-18	NA	36573376	36577915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36573526_36574820_36574901_36577140
transcript_72317.nnic	chr19	+	466	3	NIC	ENSG00000233527.10	novel	1004	3	NA	NA	-31	-1472	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAATCACTTATTATTATC	36573293	False	NA	13	True	AATAAA	-17	NA	36573313	36580340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36573526_36574820_36574901_36580166
transcript_72322.nnic	chr19	-	1019	3	NNC	ENSG00000186020.13	novel	2674	3	NA	NA	-10	4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0.5	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTCAGGCAAGTCCTTC	-36605008	False	NA	NA	False	ATTAAA	-21	NA	36605286	36580250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36581022_36589614_36589702_36605125
transcript_72324.nic	chr19	-	917	2	ISM	ENSG00000186020.13	ENST00000587286.1	568	4	-43	6548	-10	-6548	5prime_fragment	FALSE	canonical	2	5	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGATGGGGTTCTCACAAC	-36605008	False	NA	NA	False	NA	NA	NA	36605286	36588945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_36589702_36605125
transcript_72326.known	chr19	-	3955	6	FSM	ENSG00000197808.13	ENST00000588268.6	3955	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	2.36643191323985	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCTCTTCTCATTCCTT	-36666135	True	NA	0	True	NA	NA	NA	36666837	36636617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36640044_36643793_36643863_36656447_36656544_36658298_36658426_36664697_36664787_36666689
transcript_72328.known	chr19	-	3668	3	FSM	ENSG00000225975.8	ENST00000665321.2	3702	3	34	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-36687129	True	NA	NA	False	NA	NA	NA	36687434	36682635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36686016_36686685_36686807_36687267
transcript_72329.known	chr19	-	550	2	FSM	ENSG00000225975.8	ENST00000590952.2	1260	2	0	710	0	-705	multi-exon	FALSE	canonical	2	7	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATGTTTATGGTAGATGA	-36687132	True	NA	NA	False	NA	NA	NA	36687437	36686426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36686807_36687267
transcript_72331.known	chr19	+	2802	6	FSM	ENSG00000189042.14	ENST00000682579.1	2802	6	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	19.3969069699269	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATGTGTGTGTTTGCGT	36686185	True	NA	25	True	AATAAA	-27	NA	36687611	36721336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_72333.nic	chr19	+	599	6	NIC	ENSG00000189042.14	novel	2802	6	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_5	30.0705836325137	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGCATGTGCTGCCCTG	36686158	True	NA	2	True	AATAAA	-15	NA	36687584	36723347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36687635_36689396_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36723188
transcript_72334.known	chr19	+	2825	6	FSM	ENSG00000189042.14	ENST00000536254.6	2825	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	32.7694980126336	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTATATCATGTGTG	36686201	True	NA	16	True	AATAAA	-18	NA	36687627	36721327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36687687_36689400_36689498_36694801_36694877_36712385_36712513_36712780_36712868_36718947
transcript_72340.nnic	chr19	-	1225	6	NNC	ENSG00000267041.6	novel	523	5	NA	NA	-242	339	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	13.4372616257927	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGGCTTATGGTACATTCA	-36772912	True	NA	NA	False	AATAAA	-17	NA	36773067	36714043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36714501_36729189_36729311_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_72347.known	chr19	-	7712	5	FSM	ENSG00000267041.6	ENST00000591344.2	7712	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	7.49583217528247	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGCCTTATTTCTTAAT	-36763474	True	NA	-3	True	AATAAA	-21	NA	36772807	36743479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36750805_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_72348.nnic	chr19	-	1372	5	NNC	ENSG00000267041.6	novel	523	5	NA	NA	-242	-14203	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	10.7354552767919	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGATTTGTCCTATCCTT	-36772912	True	NA	NA	False	TATAAA	-43	NA	36773067	36728585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36729311_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_72349.nnic	chr19	-	938	5	NNC	ENSG00000267041.6	novel	523	5	NA	NA	-242	14458	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	10.7354552767919	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAATTTATATTTATTCA	-36772912	True	NA	NA	False	TATAAA	-17	NA	36773067	36729019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_36729311_36761642_36761739_36762304_36762432_36762594_36762676_36772724
transcript_72352.known	chr19	-	7625	4	FSM	ENSG00000267041.6	ENST00000614887.4	7625	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.4452991200136	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCTTATTTCTTAATTT	-36763481	True	NA	-1	True	AATAAA	-23	NA	36772814	36743477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36750805_36762304_36762432_36762594_36762676_36772724
transcript_72356.known	chr19	+	2691	4	FSM	ENSG00000189042.14	ENST00000360729.8	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	26.7374061735406	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTTTATATCATGTGT	36688614	False	NA	15	True	AATAAA	-17	NA	36689399	36721326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36689498_36712385_36712513_36712780_36712868_36718947
transcript_72358.known	chr19	+	1850	2	FSM	ENSG00000267260.3	ENST00000590750.1	1850	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTCGGGCATTTCCTGTG	36772116	True	NA	11	True	AATAAA	-24	NA	36773152	36777078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36773310_36775385
transcript_72360.known	chr19	+	646	2	FSM	ENSG00000267260.3	ENST00000687335.1	1273	2	65	562	37	-557	multi-exon	FALSE	canonical	3	7	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGGCGTAGACGGCCTCCG	36772153	True	NA	NA	False	NA	NA	NA	36773189	36775711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36773510_36775385
transcript_72362.known	chr19	+	2062	2	FSM	ENSG00000267260.3	ENST00000663625.1	2062	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTCTCAGAAAAAATTAAATA	36772088	True	NA	-34	True	NA	NA	NA	36773124	36777033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36773539_36775385
transcript_72368.nnic	chr19	+	1123	6	NNC	ENSG00000267254.7	novel	3024	4	NA	NA	-21	-4	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	27.6593564639527	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAGTACTTGAGAGTGATT	NA	False	NA	27	True	AATAAA	-35	NA	36797480	36828111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36797812_36801202_36801241_36801875_36801934_36823730_36823822_36825379_36825523_36827649
transcript_72371.known	chr19	-	5032	6	FSM	ENSG00000185869.15	ENST00000391711.8	5032	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	9.57914401186244	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	-36916198	True	NA	0	True	TATAAA	-20	NA	36916291	36888123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36916010
transcript_72373.known	chr19	-	4977	6	FSM	ENSG00000185869.15	ENST00000520965.5	4977	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	8.11418511004032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTTGGTCATCTTTACT	-36915411	True	NA	0	True	TATAAA	-20	NA	36916021	36888123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36892472_36907928_36908025_36908332_36908460_36914964_36915023_36915129_36915252_36915795
transcript_72378.nic	chr19	+	990	5	NIC	ENSG00000267254.7	novel	653	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	31.3398707719097	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTGAGAGTGATTATTA	NA	False	NA	31	True	AATAAA	-39	NA	36797480	36828115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36797812_36801202_36801241_36801875_36801934_36812509_36812607_36827649
transcript_72380.nic	chr19	+	970	5	NIC	ENSG00000267254.7	novel	850	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	25.6758641529355	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAACATGAAGTACTT	NA	False	NA	17	True	AATAAA	-25	NA	36797480	36828101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36797812_36801202_36801241_36801875_36801934_36823730_36823822_36827649
transcript_72384.known	chr19	-	2451	5	FSM	ENSG00000197863.9	ENST00000615484.4	2451	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	10.8857705285386	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGAGCACACATCCAGCA	-36838009	False	NA	NA	False	NA	NA	NA	36838027	36818321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36837671
transcript_72386.known	chr19	-	3040	5	FSM	ENSG00000197863.9	ENST00000356725.9	3040	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	7.56224173112709	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTTGAATATTAATTTCAC	-36838086	True	NA	NA	False	AGTAAA	-15	NA	36838387	36817427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36838336
transcript_72387.known	chr19	-	922	5	FSM	ENSG00000197863.9	ENST00000528994.5	922	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	6.59545297913646	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTCTGGTTCAGATCATAC	-36850231	False	NA	-85	True	AATACA	-43	NA	36850313	36819806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850001
transcript_72388.known	chr19	-	581	5	FSM	ENSG00000197863.9	ENST00000586323.5	581	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	9.73075022801428	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATACGCACCTGTGAAAA	-36850705	True	NA	90	True	NA	NA	NA	36850787	36819923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_36820115_36823284_36823381_36823666_36823791_36825610_36825693_36850699
transcript_7240.known	chr1	-	6714	20	FSM	ENSG00000162613.17	ENST00000370768.7	6714	20	0	0	0	0	multi-exon	TRUE	canonical	3	195	junction_16	159.531307984191	253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77964775	True	NA	91	True	AATAAA	-20	NA	77979072	77944054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77948775_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_72406.known	chr19	+	2433	4	FSM	ENSG00000267254.7	ENST00000655476.1	2433	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	27.9205221218292	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACTTATAATACCCAAAAAA	36795868	True	NA	NA	False	NA	NA	NA	36797524	36804507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36802457
transcript_72407.known	chr19	+	1474	4	FSM	ENSG00000267254.7	ENST00000665341.1	1474	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.2691628926573	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATATAATCTGTTAATA	36795935	True	NA	NA	False	NA	NA	NA	36797591	36813667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36812509
transcript_7241.nic	chr1	-	1033	11	ISM	ENSG00000162613.17	ENST00000294623.8	2201	21	-45	17804	-22	783	5prime_fragment	FALSE	canonical	3	571	junction_7	62.6805392446491	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGCTGGTGTTCGCATTC	-77964835	True	NA	20	True	AATACA	-4	NA	77979132	77964285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_72412.known	chr19	+	3024	4	FSM	ENSG00000267254.7	ENST00000657461.1	3024	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	10.1980390271856	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTATCTCTATCTATT	36795845	True	NA	16	True	CATAAA	-20	NA	36797501	36830267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801202_36801241_36801875_36801934_36827649
transcript_72414.known	chr19	+	850	4	FSM	ENSG00000267254.7	ENST00000588906.5	850	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	4.10960933531265	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGAGAACATGAAGTACTT	36795906	True	NA	17	True	AATAAA	-25	NA	36797562	36828101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801875_36801934_36823730_36823822_36827649
transcript_72415.nnic	chr19	+	1014	4	NNC	ENSG00000251247.12	novel	3103	4	NA	NA	4	-11006	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_3	20.0388511535855	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTGCTAGAGTTTTA	36850330	True	NA	NA	False	CATAAA	-23	NA	36850364	36866048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36850969_36851829_36851905_36862916_36863012_36865808
transcript_72416.known	chr19	+	458	4	FSM	ENSG00000251247.12	ENST00000526123.5	458	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	18.9267594221045	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTATGATACTGTATGT	36850081	True	NA	NA	False	CATAAA	-17	NA	36850894	36893034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36876784_36876877_36892817
transcript_72418.known	chr19	+	1795	3	FSM	ENSG00000267254.7	ENST00000587413.6	1795	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTAACTAGAATCTAAT	36795861	True	NA	NA	False	NA	NA	NA	36797517	36803900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801875_36801934_36802457
transcript_72421.known	chr19	+	881	3	FSM	ENSG00000267254.7	ENST00000663523.1	881	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	11.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCACGCCTGTAATCCCA	36795877	True	NA	110	True	AATAAA	-24	NA	36797533	36828194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36797812_36801875_36801934_36827649
transcript_72423.nnic	chr19	+	409	3	NNC	ENSG00000251247.12	novel	2959	3	NA	NA	-1	-11006	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	24	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTTTGCTAGAGTTTTA	36850061	True	NA	NA	False	CATAAA	-23	NA	36850874	36866048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_36850969_36851829_36851905_36865808
transcript_72424.known	chr19	+	2959	3	FSM	ENSG00000251247.12	ENST00000420450.6	2959	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	9	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGATGGCCCCTTTTCAG	36850062	True	NA	12	True	ATTAAA	-24	NA	36850875	36879575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36876784
transcript_72427.nic	chr19	+	409	3	ISM	ENSG00000251247.12	ENST00000432005.6	585	4	-78	19995	-24	0	5prime_fragment	FALSE	canonical	2	6	junction_2	21.5	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTATGATACTGTATGT	36850038	True	NA	NA	False	CATAAA	-17	NA	36850851	36893034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_36850969_36851829_36851905_36892817
transcript_72431.nnic	chr19	+	763	2	NIC	ENSG00000267254.7	novel	881	3	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACTTGAGAGTGATTATTA	36795858	True	NA	31	True	AATAAA	-39	NA	36797514	36828115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_36797812_36827649
transcript_72432.known	chr19	+	376	1	FSM	ENSG00000243297.2	ENST00000496160.2	376	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACTGATTGTCAAATAC	NA	False	NA	NA	False	NA	NA	NA	36901741	36902117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36901700_36902100
transcript_72433.known	chr19	+	585	4	FSM	ENSG00000251247.12	ENST00000432005.6	585	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	21.8225164044439	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTACATGTCCCTAGTTA	36850116	True	NA	NA	False	AATAAA	-21	NA	36850929	36913029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36850969_36851829_36851905_36892817_36892986_36912726
transcript_72437.known	chr19	+	1827	8	FSM	ENSG00000198453.14	ENST00000427117.5	1827	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	10.3903408834104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGTATGAGTTGATATG	36915882	True	NA	6	True	ATTAAA	-18	NA	36916328	36979907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36974419_36974467_36979003
transcript_72441.known	chr19	+	4096	7	FSM	ENSG00000198453.14	ENST00000333987.12	4096	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	5.14511634681104	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATATGAATGTTTACTTGT	36915885	True	NA	17	True	AATAAA	-27	NA	36916331	36952734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36922585_36922847_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_72446.known	chr19	+	1914	6	FSM	ENSG00000198453.14	ENST00000587857.5	1914	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	11.3595774569303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCAGTGCTCATTACTT	36916008	False	NA	NA	False	AATAAA	-14	NA	36916454	36950936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36925199_36925259_36936745_36936873_36937146_36937243_36949511
transcript_72449.known	chr19	+	3774	5	FSM	ENSG00000198453.14	ENST00000415168.5	3774	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.4257215820976	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTACTTGTAATAGTGTT	36915896	True	NA	26	True	AATAAA	-36	NA	36916342	36952743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36916592_36917578_36917649_36936745_36936873_36937146_36937243_36949511
transcript_7245.known	chr1	-	2524	20	FSM	ENSG00000162613.17	ENST00000370767.5	2524	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	223.680049496901	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTCGGTAAGTTGGATA	-77964795	True	NA	-19	True	AATAAA	-15	NA	77979092	77948404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77948915_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967102_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_72451.nic	chr19	+	812	3	ISM	ENSG00000198453.14	ENST00000333987.12	4096	7	-36	29703	-33	-13793	5prime_fragment	FALSE	canonical	3	23	junction_2	1.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTATTTCTTAAGAGTAT	NA	False	NA	NA	False	AATAAA	-14	NA	36916295	36923031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_36916592_36917578_36917649_36922585
transcript_72453.known	chr19	+	1902	3	FSM	ENSG00000198453.14	ENST00000586353.5	1902	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	2	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTTTGCCTTTAATGTTT	36972761	True	NA	NA	False	AGTAAA	-30	NA	36973212	36980317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_36973754_36974419_36974467_36979003
transcript_72454.known	chr19	+	3639	5	FSM	ENSG00000197050.11	ENST00000337995.4	3639	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	6.01560470775798	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTACCTGGAAGTGGGA	37077256	True	NA	65	True	AATAAA	-20	NA	37078432	37130368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127
transcript_72456.known	chr19	+	695	4	FSM	ENSG00000197050.11	ENST00000589245.5	695	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	32.0970749792286	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACCCTATGAATGTAAG	37077269	True	NA	NA	False	NA	NA	NA	37078445	37127481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37078571_37089038_37089128_37090994_37091122_37127127
transcript_72459.known	chr19	+	1945	6	FSM	ENSG00000197050.11	ENST00000304239.11	1945	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.5932424718887	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTGTTGATGCTATTGTAG	37077258	True	NA	7	True	AATAAA	-13	NA	37078434	37130310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37078571_37080344_37080389_37089038_37089128_37090994_37091122_37127127_37128403_37130036
transcript_7246.known	chr1	-	2201	21	FSM	ENSG00000162613.17	ENST00000294623.8	2201	21	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	243.02787391573	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCCCTGTGAGGTTTT	-77964790	True	NA	NA	False	AATAAA	-17	NA	77979087	77946481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77946577_77947452_77947553_77949154_77949301_77955254_77955330_77956571_77956701_77960183_77960264_77960343_77960496_77962769_77962931_77963573_77963716_77964061_77964163_77964253_77964357_77964645_77964748_77964869_77964969_77965068_77965232_77966693_77966752_77966883_77966956_77967048_77967099_77967626_77967667_77968164_77968204_77969924_77970016_77978884
transcript_72461.known	chr19	-	596	3	FSM	ENSG00000196967.11	ENST00000588354.1	596	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	33.5	752	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGAATTTCTTTTTTTTT	-37171179	True	NA	71	True	AATAAA	-17	NA	37172694	37165384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37165697_37169838_37170055_37172626
transcript_72465.known	chr19	+	6732	6	FSM	ENSG00000188283.12	ENST00000684119.1	6732	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	8.90842298052804	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTGCAGTATCACTGTT	37217565	True	NA	3	True	AATAAA	-18	NA	37218213	37248740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37218275_37224817_37224940_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_7247.known	chr1	-	2156	3	FSM	ENSG00000162613.17	ENST00000489495.5	2156	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	36.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGGAGTGCTTTGTGTTT	-77948293	False	NA	91	True	AATAAA	-20	NA	77948333	77944054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_77944270_77945505_77945643_77946529
transcript_72471.nnic	chr19	+	1742	5	NIC	ENSG00000188283.12	novel	6732	6	NA	NA	-36	-110	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	6.83282518435822	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCGACATCTGAGAATTCAC	37217738	True	NA	2	True	AATAAA	-14	NA	37217889	37243548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37218275_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_72472.nnic	chr19	+	1879	5	NIC	ENSG00000188283.12	novel	6732	6	NA	NA	-36	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_1	6.83282518435822	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTCCTCATATTTTAAACC	37217738	True	NA	NA	False	AATAAA	-25	NA	37217889	37243685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37218275_37230408_37230463_37235548_37235676_37235978_37236075_37242468
transcript_72478.known	chr19	-	1186	4	FSM	ENSG00000267605.8	ENST00000656668.1	1186	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.69967317119759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGGTGCCCCTTT	NA	False	NA	NA	False	ATTAAA	-21	NA	37269033	37265938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37266086_37266813_37266984_37267217_37267800_37268746
transcript_72479.known	chr19	-	570	3	FSM	ENSG00000267605.8	ENST00000653146.2	575	3	5	0	5	0	multi-exon	FALSE	canonical	1	1	junction_2	1.5	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTTTTGGTGCCCCTTT	-37304157	True	NA	NA	False	ATTAAA	-21	NA	37304362	37265938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37266086_37266813_37266984_37304109
transcript_7248.known	chr1	+	3778	6	FSM	ENSG00000137960.6	ENST00000370759.4	3778	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	4.51663591625449	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTTAGTCCCATGTTA	78045656	True	NA	NA	False	AGTAAA	-2	NA	78045965	78138444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_78046335_78080674_78080861_78094951_78095133_78119392_78119500_78125880_78125963_78135591
transcript_72480.known	chr19	-	1229	3	FSM	ENSG00000267605.8	ENST00000654113.1	1229	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AATGTTTTTTTGGTGCCCCT	-37304190	True	NA	NA	False	ATTAAA	-19	NA	37304395	37265940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37266086_37266813_37267612_37304109
transcript_72482.known	chr19	-	2732	6	FSM	ENSG00000245680.11	ENST00000527838.5	2732	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	12.8530152104477	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCCTTCTGTGAGTTGTTT	-37210079	True	NA	-4	True	AATATA	-14	NA	37210484	37184821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37186929_37187098_37187245_37189660_37189754_37190023_37190151_37207039_37207255_37210440
transcript_72494.nic	chr19	+	3015	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_6	52.1429658620306	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAATTGTCAGTGTAT	37313744	True	NA	21	True	AATAAA	-22	NA	37317880	37364447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362105
transcript_72495.nic	chr19	+	3012	7	NIC	ENSG00000181666.19	novel	3464	11	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	3	54	junction_4	35.4906090865363	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTTCAATTGTCAGTGTAT	37313744	True	NA	21	True	AATAAA	-22	NA	37317880	37364447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347189_37347317_37347776_37347873_37362108
transcript_72499.nnic	chr19	+	782	6	NNC	ENSG00000181666.19	novel	575	6	NA	NA	-6	-1285	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	64.6918851170686	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTATGTGAGTGATAGAA	37313744	True	NA	NA	False	AATGAA	-17	NA	37317880	37327820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795_37324937_37327629
transcript_72503.nnic	chr19	+	1071	6	NNC	ENSG00000181666.19	novel	575	6	NA	NA	-6	607	at_least_one_novel_splicesite	TRUE	canonical	3	9	junction_4	66.9626761711328	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTTCCTCAGTGGT	37313744	True	NA	NA	False	ATTAAA	-23	NA	37317880	37329712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984_37329065_37329171
transcript_72505.known	chr19	+	2854	6	FSM	ENSG00000181666.19	ENST00000544914.5	2854	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	49.4691823259694	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCTTCAATTGTCAGTGTA	37313774	True	NA	20	True	AATAAA	-21	NA	37317910	37364446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37347776_37347873_37362108
transcript_72511.known	chr19	+	664	5	FSM	ENSG00000181666.19	ENST00000591485.5	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_4	49.3425526295509	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTACAGGCCTGAGCCACT	37313782	True	NA	NA	False	NA	NA	NA	37317918	37325047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795
transcript_72512.known	chr19	+	958	5	FSM	ENSG00000181666.19	ENST00000589218.5	958	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	60.8995073871702	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTTGAGTTCATGCCAC	37313763	True	NA	NA	False	AAGAAA	-20	NA	37317899	37329105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328578
transcript_72515.nnic	chr19	+	1178	5	NNC	ENSG00000181666.19	novel	958	5	NA	NA	-6	607	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	60.0416522091123	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTTCCTCAGTGGT	37313744	True	NA	NA	False	ATTAAA	-23	NA	37317880	37329712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37328984
transcript_72516.known	chr19	+	480	5	FSM	ENSG00000181666.19	ENST00000589801.1	480	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	63.9037361975026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTAATTGCTCTGTGATG	37313902	False	NA	NA	False	ATTAAA	-13	NA	37318038	37344797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37344609
transcript_72518.known	chr19	+	734	5	FSM	ENSG00000181666.19	ENST00000591259.5	734	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	50.2959988468268	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGATTGTGTTCTTATTGA	37333655	True	NA	NA	False	AGTAAA	-33	NA	37334711	37359776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37359425
transcript_72521.known	chr19	+	2772	5	FSM	ENSG00000181666.19	ENST00000392153.8	2785	5	17	-4	-5	4	multi-exon	FALSE	canonical	3	44	junction_2	41.0327613011847	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAATTGTCAGTGTATCCTC	37333609	True	NA	25	True	AATAAA	-26	NA	37334665	37364451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37335168_37335258_37347189_37347317_37347776_37347873_37362108
transcript_72523.known	chr19	+	563	5	FSM	ENSG00000181666.19	ENST00000591391.5	563	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	53.8725347463807	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAGCAGGATCCATTCTGC	37333601	True	NA	NA	False	AAAACA	-21	NA	37334657	37362273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37335168_37335258_37347231_37347317_37347776_37347873_37362105
transcript_72526.known	chr19	+	3464	11	FSM	ENSG00000181666.19	ENST00000652615.1	3464	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	68.5291178988902	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTCTTTTGCTCAATAAAA	37313750	True	NA	-19	True	NA	NA	NA	37317886	37364407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37318187_37322184_37322233_37323532_37323571_37324207_37324266_37324795_37324937_37325153_37325275_37347189_37347317_37347776_37347873_37358546_37358662_37359425_37359547_37362108
transcript_72530.known	chr19	+	573	4	FSM	ENSG00000181666.19	ENST00000592768.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	56.8584988272544	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAAGCAGAATGGATTCA	37333567	True	NA	NA	False	NA	NA	NA	37334623	37362299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37334783_37347189_37347317_37347776_37347873_37362108
transcript_72532.nic	chr19	+	424	3	ISM	ENSG00000181666.19	ENST00000324411.8	2929	6	-35	19651	3	7	5prime_fragment	FALSE	canonical	1	1	junction_2	22	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTCTGTGATGTAGCTCC	37333586	True	NA	NA	False	ATTAAA	-20	NA	37334642	37344804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_37334783_37335168_37335258_37344609
transcript_72535.known	chr19	+	1142	5	FSM	ENSG00000189164.15	ENST00000483919.5	1142	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	7.88986691902975	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATCTGATGTAAATTAAC	37370653	True	NA	NA	False	AATAAA	-25	NA	37371158	37385644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37371227_37374157_37374232_37379119_37379247_37380276_37380373_37384867
transcript_7254.nnic	chr1	+	2466	4	NIC	ENSG00000162616.9	novel	2903	3	NA	NA	-11	-646	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	75.3760940587635	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTTTTCTGTTTTATA	77975850	True	NA	11	True	AATATA	-20	NA	77979269	78017318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_77979620_78005079_78005322_78013050_78013620_78016013
transcript_72543.known	chr19	-	4066	6	FSM	ENSG00000196437.12	ENST00000316950.11	4066	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_5	5.85149553533112	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGACAGTGGTGACAAATC	-37466900	True	NA	-18	True	AATAAA	-15	NA	37467444	37411156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37465312_37465474_37467083
transcript_72550.known	chr19	+	5283	5	FSM	ENSG00000171827.11	ENST00000330173.6	5283	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	3.03108891324554	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGCTTCTATCAGTTCT	37468512	True	NA	7	True	AATAAA	-15	NA	37469355	37488652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476435_37483878
transcript_72552.known	chr19	+	587	5	FSM	ENSG00000171827.11	ENST00000590664.5	587	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	2.73861278752583	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACACTTACAAGCTATAACC	37468575	True	NA	NA	False	AATAGA	-1	NA	37469418	37483960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37469558_37470303_37470388_37475880_37476008_37476338_37476494_37483878
transcript_72557.known	chr19	+	1964	4	FSM	ENSG00000171827.11	ENST00000588644.5	1964	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	2.86744175568088	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTACCTTTAAATCCATTT	37468512	True	NA	26	True	AATATA	-32	NA	37469355	37485358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37469558_37475880_37476008_37476338_37476494_37483878
transcript_72558.known	chr19	-	579	4	FSM	ENSG00000196437.12	ENST00000592490.5	579	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	34.8839345385363	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTATGAGAAAGGAGCATT	-37466425	True	NA	-76	True	NA	NA	NA	37467208	37414184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37414420_37444906_37444965_37465312_37465474_37467083
transcript_72560.known	chr19	-	3689	5	FSM	ENSG00000196437.12	ENST00000392149.6	3689	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	34.8998567332303	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGGTGACAAATCTG	-37466446	True	NA	-16	True	AATAAA	-17	NA	37467229	37411154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37414420_37425867_37425964_37426251_37426379_37444906_37444965_37467086
transcript_7257.known	chr1	+	949	3	FSM	ENSG00000162616.9	ENST00000487931.1	949	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	72.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAGGCACTGAAAATATA	77975755	True	NA	NA	False	AATGAA	-22	NA	77979174	78016274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77979294_78013050_78013620_78016013
transcript_72584.known	chr19	+	3869	7	FSM	ENSG00000188227.14	ENST00000587986.5	3869	7	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	10.9048918686371	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACATTCTTACGTTTACAT	37506787	False	NA	5	True	AATAAA	-18	NA	37507217	37536530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37507308_37508264_37508404_37520183_37520313_37522531_37522648_37523409_37523455_37532355_37532483_37533307
transcript_72593.known	chr19	+	3191	5	FSM	ENSG00000171817.17	ENST00000316433.9	3191	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGACCTCATTGCTTAAG	NA	False	NA	NA	False	AATAAA	-16	NA	37594875	37614179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37595096_37598375_37598457_37599625_37599753_37601009_37601106_37611512
transcript_72594.known	chr19	-	4003	5	FSM	ENSG00000198182.13	ENST00000395835.7	4003	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_4	21.2294017814916	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATATCATTACTTGTGT	-37718074	False	NA	NA	False	AATAAA	-18	NA	37719188	37696372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37699896_37707913_37708010_37709695_37709823_37711609_37711693_37719014
transcript_72598.nnic	chr19	-	944	5	NNC	ENSG00000198182.13	novel	4327	5	NA	NA	-16	-3097	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	32.7108544675922	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTATCTCCTTGAGTA	-37718625	True	NA	NA	False	AATAAA	-32	NA	37719739	37702916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_37703084_37707913_37708010_37709695_37709823_37711609_37711693_37719268
transcript_72600.nnic	chr19	-	1087	4	NNC	ENSG00000266916.8	novel	913	3	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6.59966329107444	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507115	37497158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_37497593_37504460_37504642_37505845_37506041_37506838
transcript_72603.known	chr19	-	1033	4	FSM	ENSG00000266916.8	ENST00000585890.3	1038	4	0	5	0	-5	multi-exon	TRUE	canonical	1	1	junction_1	6.12825877028341	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTTCTTCAAGGTTCT	-37506808	True	NA	NA	False	AATAAA	-35	NA	37507087	37497163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37498023_37498184_37505845_37506041_37506838
transcript_72604.known	chr19	-	2904	4	FSM	ENSG00000180479.14	ENST00000593133.5	2904	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.92160768674447	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGATATTTGTTGTTAAAA	-37594303	True	NA	1	True	ATTAAA	-26	NA	37594746	37564252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594086
transcript_72606.known	chr19	-	2289	4	FSM	ENSG00000180479.14	ENST00000451802.7	2289	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	4.92160768674447	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATAGCATCTGATATTTGTT	-37594349	True	NA	-6	True	ATTAAA	-19	NA	37594792	37564259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37566292_37583970_37584098_37586667_37586746_37594740
transcript_72607.known	chr19	-	403	4	FSM	ENSG00000196381.11	ENST00000585624.1	403	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1.69967317119759	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAAAGTTCCAGTTTCTTG	-37692125	False	108	NA	False	AATAAA	-28	NA	37692233	37678622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37678774_37686450_37686523_37691520_37691619_37692151
transcript_72609.known	chr19	-	448	3	FSM	ENSG00000266916.8	ENST00000585397.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	7.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGTGTGAGTTTAAAGCCA	-37505988	False	NA	NA	False	NA	NA	NA	37506267	37497362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37505845_37506041_37506244
transcript_7261.known	chr1	+	2903	3	FSM	ENSG00000162616.9	ENST00000370763.6	2903	3	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	67	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTGCAAGTTTTTG	78004755	True	NA	5	True	TATAAA	-16	NA	78004938	78017964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_78005322_78013050_78013620_78016013
transcript_72610.nic	chr19	-	895	3	NIC	ENSG00000266916.8	novel	913	3	NA	NA	198	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_2	6.5	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	-37506569	False	NA	NA	False	AATAAA	-40	NA	37506848	37497158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_37497593_37505845_37506041_37506582
transcript_72611.known	chr19	-	913	3	FSM	ENSG00000266916.8	ENST00000589025.6	913	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1.5	302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTTCAAGGTTCTTTCTT	NA	False	NA	NA	False	AATAAA	-40	NA	37507122	37497158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37497593_37505845_37506041_37506838
transcript_72616.nnic	chr19	-	427	3	NIC	ENSG00000196381.11	novel	403	4	NA	NA	-20	-6	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAAAGGTAAAGTTCCAGT	-37692227	False	108	NA	False	AATAAA	-22	NA	37692335	37678628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_37678774_37691520_37691619_37692151
transcript_72617.known	chr19	-	670	2	FSM	ENSG00000266916.8	ENST00000587060.1	670	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAAGGCTGCTGCCCCCAC	-37506767	True	NA	NA	False	AATAAA	-20	NA	37507046	37505578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37506041_37506838
transcript_72618.known	chr19	-	4440	6	FSM	ENSG00000120784.17	ENST00000514101.6	4440	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1.62480768092719	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTTGTGTGTGTTTCTT	-37656154	True	NA	-7	True	AATAAA	-13	NA	37656261	37632487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37636306_37643264_37643364_37644609_37644737_37647813_37647900_37654711_37654880_37656119
transcript_72622.known	chr19	-	2443	6	FSM	ENSG00000189144.15	ENST00000586155.5	2443	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.99332590941915	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	-37779145	True	NA	NA	False	NA	NA	NA	37779585	37738301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37740195_37770004_37770098_37770406_37770598_37771563_37771697_37773660_37773752_37779543
transcript_72627.known	chr19	-	476	5	FSM	ENSG00000189144.15	ENST00000378445.8	476	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.53553390593274	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAGTGGTTATCAACTTAT	-37779134	True	NA	NA	False	AAGAAA	-16	NA	37779574	37740060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37740195_37770004_37770098_37771563_37771691_37773660_37773752_37779543
transcript_72631.nic	chr19	-	2181	4	NIC	ENSG00000189144.15	novel	2253	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	4.02768199119819	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAACAG	-37779165	True	NA	NA	False	NA	NA	NA	37779605	37738301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_37740195_37770004_37770098_37771563_37771697_37779543
transcript_72633.nic	chr19	-	651	4	ISM	ENSG00000189144.15	ENST00000586155.5	2443	6	-21	31932	-20	173	5prime_fragment	FALSE	canonical	2	2	junction_1	2.05480466765633	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTCATTTCTTCAATC	-37779166	False	NA	NA	False	ATTAAA	-17	NA	37779606	37770233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_37770598_37771563_37771697_37773660_37773752_37779543
transcript_72635.known	chr19	-	659	3	FSM	ENSG00000189144.15	ENST00000494605.2	659	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTGGTAGATTTAAGAGGAA	NA	False	NA	NA	False	NA	NA	NA	37779878	37770406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_37770598_37771563_37771697_37779543
transcript_72636.nnic	chr19	-	858	3	NNC	ENSG00000189144.15	novel	2266	3	NA	NA	-2	-13777	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	1.5	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTTTTCACTGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	37817302	37807811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_37808232_37810604_37810801_37817060
transcript_72637.nnic	chr19	+	680	2	NNC	ENSG00000267422.1	novel	446	2	NA	NA	-33	-3313	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAGAAGAAGAAGAAG	NA	False	NA	NA	False	NA	NA	NA	37779652	37789459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_37780024_37789150
transcript_72639.nic	chr19	-	1175	2	ISM	ENSG00000189144.15	ENST00000591516.6	578	7	-53	32556	-20	-2233	5prime_fragment	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTTAAAAAATGTACACGA	-37779166	False	NA	NA	False	NA	NA	NA	37779606	37772639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_37773752_37779543
transcript_7264.known	chr1	-	209	1	FSM	ENSG00000273338.1	ENST00000608684.1	209	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACTTAAACATGATTTTAG	-78004241	True	NA	NA	False	AATAAA	-31	NA	78004554	78004345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_78004300_78004600
transcript_72640.nnic	chr19	-	660	2	NNC	ENSG00000189144.15	novel	2266	3	NA	NA	0	-13777	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATTGCTTTTCACTGGTG	NA	False	NA	NA	False	AATAAA	-19	NA	37817300	37807811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_37808232_37817060
transcript_72643.known	chr19	+	6580	5	FSM	ENSG00000267640.7	ENST00000443870.3	6580	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.40312423743285	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCATGCTGTTCTGAGTAG	37816723	True	NA	7	True	AATAAA	-19	NA	37817410	37832160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37823810_37823907_37826171
transcript_72645.nic	chr19	+	2281	4	FSM	ENSG00000267640.7	ENST00000685725.1	2389	4	104	4	25	-4	multi-exon	FALSE	canonical	3	19	junction_3	8.9566858950296	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATCTGCATTGATTTTTT	37816748	True	NA	10	True	AATAAA	-15	NA	37817435	37827982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37817702_37819496_37819618_37820223_37820307_37826171
transcript_72648.nic	chr19	+	914	3	ISM	ENSG00000267640.7	ENST00000685725.1	2389	4	-6	7346	-6	345	5prime_fragment	FALSE	canonical	3	24	junction_1	8	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAATATGTGTGTGTTTTTA	NA	False	NA	NA	False	NA	NA	NA	37817325	37820640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_37817702_37819496_37819618_37820223
transcript_7265.known	chr1	+	906	2	FSM	ENSG00000162616.9	ENST00000484662.1	906	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTAAGTTGGTAGGACCTA	77975861	True	NA	NA	False	AATATA	-29	NA	77979280	78013617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_77979620_78013050
transcript_72650.known	chr19	+	561	3	FSM	ENSG00000267640.7	ENST00000589653.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	17	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGGCCCATGTAAGTTCA	37817315	False	NA	NA	False	NA	NA	NA	37817358	37820295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37817727_37819496_37819618_37820223
transcript_72651.known	chr19	+	562	3	FSM	ENSG00000267640.7	ENST00000592103.5	562	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTAAAAGTATTACTCCAG	37816797	True	NA	NA	False	NA	NA	NA	37817484	37826408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_37817727_37820223_37820307_37826171
transcript_72654.known	chr19	-	2301	12	FSM	ENSG00000011332.22	ENST00000355526.10	2301	12	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_11	9.15342143501227	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCCTCGTTCTCCCGTCTG	-38223689	False	533	-10	True	ATTAAA	-26	NA	38224222	38211005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38212134_38212279_38212362_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_72655.known	chr19	-	2356	12	FSM	ENSG00000011332.22	ENST00000614244.4	2356	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	11.6484312425847	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGACTGCCTCGTTCTCCCGT	-38223717	False	NA	-13	True	ATTAAA	-23	NA	38224250	38211008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38212134_38212279_38212392_38213643_38213757_38216139_38216260_38216352_38216404_38217459_38217592_38217797_38217877_38218572_38218663_38218930_38219059_38222356_38222465_38222547_38222709_38224113
transcript_7266.known	chr1	-	3539	15	FSM	ENSG00000162618.15	ENST00000370742.4	3539	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.86872651828903	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAATTCCGCTACAGCTTTG	-79006671	True	NA	NA	False	AATAAA	-17	NA	79006730	78889763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_78891217_78891523_78891693_78893097_78893190_78917633_78917701_78917829_78918051_78920182_78920387_78921612_78921787_78926885_78927092_78936294_78936412_78937806_78937991_78938099_78938280_78939187_78939259_78946273_78946427_79005069_79005220_79006632
transcript_72665.known	chr19	-	964	8	FSM	ENSG00000167645.17	ENST00000329420.12	964	8	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_7	317.512204489843	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315774	False	NA	NA	False	NA	NA	NA	38315793	38305351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315716
transcript_72666.nic	chr19	-	1288	8	NIC	ENSG00000167645.17	novel	2769	8	NA	NA	28	0	combination_of_known_junctions	FALSE	canonical	3	125	junction_7	340.337587505976	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGACAGCCTCTCCTTGG	-38315867	False	NA	-13	True	AATAAA	-16	NA	38315886	38305114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315722
transcript_72667.known	chr19	-	940	8	FSM	ENSG00000167645.17	ENST00000591784.5	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_7	352.109850669895	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCGCCCGCTGAACCTCCC	-38315780	False	NA	NA	False	NA	NA	NA	38315799	38305351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315746
transcript_72674.known	chr19	+	1246	7	FSM	ENSG00000167642.13	ENST00000587090.5	1246	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	1180.42526470571	1139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGCATGTGCTTTCTTT	38255607	True	NA	14	True	AATAAA	-26	NA	38264575	38292451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38264724_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_727.nnic	chr1	-	1087	7	NNC	ENSG00000227232.5	novel	1351	11	NA	NA	204	-2038	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_6	99.9633266086452	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTCTGGACTTCTCACTT	NA	False	NA	0	True	CATAAA	-21	NA	29366	16441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_16766_16857_17056_17232_17369_17605_17743_17914_18062_18267_18367_29320
transcript_72700.known	chr19	+	520	4	FSM	ENSG00000167644.12	ENST00000588605.5	520	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	76.2932937201342	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301538	True	NA	27	True	ATTAAA	-18	NA	38304163	38305006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304284_38304374_38304491_38304564_38304687_38304844
transcript_72702.known	chr19	+	374	4	FSM	ENSG00000167644.12	ENST00000301246.10	374	4	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_1	17.5562587763516	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301625	True	NA	27	True	ATTAAA	-18	NA	38304250	38305006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304284_38304374_38304491_38304623_38304687_38304844
transcript_72703.known	chr19	-	560	4	FSM	ENSG00000167641.11	ENST00000301242.9	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	16.391054470859	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	-38256348	False	1037	-1	True	NA	NA	NA	38256374	38251236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38251447_38252305_38252339_38252893_38252975_38256138
transcript_72705.known	chr19	-	607	3	FSM	ENSG00000167641.11	ENST00000587515.5	607	3	0	0	0	0	multi-exon	FALSE	canonical	3	302	junction_1	18.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACTGTGTGGCTGTTTTTCC	-38253222	False	NA	-1	True	NA	NA	NA	38253257	38251236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38251447_38252305_38252339_38252893
transcript_72706.known	chr19	+	1688	7	FSM	ENSG00000167642.13	ENST00000301244.12	1688	7	0	0	0	0	multi-exon	FALSE	canonical	3	2937	junction_5	127.361253483502	5205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCGTGAACTTTCGCCAA	38255604	True	NA	4	True	AATAAA	-16	NA	38264572	38292615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38264999_38283626_38283798_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_72707.known	chr19	+	1367	6	FSM	ENSG00000167642.13	ENST00000454580.7	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	1205.61370264277	1144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATGGGAGTCCTAATTTC	38255607	True	NA	31	True	AATAAA	-43	NA	38264575	38292468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38264999_38287875_38287936_38289137_38289192_38290118_38290281_38290536_38290576_38291839
transcript_72708.known	chr19	-	622	2	FSM	ENSG00000286037.1	ENST00000651064.1	622	2	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAGTAAGACAGCCCAGGG	NA	False	NA	NA	False	NA	NA	NA	38292423	38290116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38290207_38291891
transcript_72709.known	chr19	+	383	3	FSM	ENSG00000167642.13	ENST00000587334.1	383	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1566	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGATTGACTCGGATTTGA	38290081	True	NA	-7	True	TTTAAA	-4	NA	38290186	38292070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38290281_38290517_38290576_38291839
transcript_72710.known	chr19	+	462	3	FSM	ENSG00000167644.12	ENST00000589986.2	462	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	11	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGCGACTGGTCAGCGTG	38301625	True	NA	24	True	ATTAAA	-15	NA	38304250	38305003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304491_38304623_38304687_38304844
transcript_72711.known	chr19	+	502	3	FSM	ENSG00000167644.12	ENST00000591852.1	502	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	89.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGACTGGTCAGCGTGGTG	38301647	False	NA	27	True	ATTAAA	-18	NA	38304272	38305006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38304491_38304564_38304687_38304844
transcript_72712.known	chr19	-	1181	8	FSM	ENSG00000167645.17	ENST00000592694.5	1181	8	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	215.510594464705	2062	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTTGGCCTCGCGCACG	-38315895	False	NA	-2	True	AATAAA	-27	NA	38315914	38305103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_72713.known	chr19	-	1257	9	FSM	ENSG00000167645.17	ENST00000337679.12	1257	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	467.674499518629	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGACAGCCTCTCCTTGGC	-38315904	False	2916	-12	True	AATAAA	-17	NA	38315923	38305113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38305508_38306913_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_72714.known	chr19	-	1077	8	FSM	ENSG00000167645.17	ENST00000591755.5	1077	8	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	400.474310623525	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAATAAAAATAAAAAAT	-38315901	False	NA	NA	False	NA	NA	NA	38315920	38306696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38306991_38307427_38307522_38307596_38307753_38308791_38308850_38308978_38309058_38309223_38309329_38309404_38309644_38315868
transcript_72733.known	chr19	+	771	6	FSM	ENSG00000099341.12	ENST00000592561.5	771	6	0	0	0	0	multi-exon	FALSE	canonical	3	1782	junction_3	102.071347595689	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGACCAAGGGGTGAAGT	38351542	True	NA	NA	False	NA	NA	NA	38374771	38382254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38374962_38376159_38376233_38376351_38376455_38379239_38379406_38380898_38381000_38382116
transcript_72734.known	chr19	-	369	4	FSM	ENSG00000179168.15	ENST00000591809.5	369	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.35702260395516	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGCAGCCTGTCAATC	-38387927	True	NA	-7	True	AATAAA	-14	NA	38388024	38384352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38384530_38385420_38385501_38387760_38387823_38387974
transcript_72735.nnic	chr19	-	486	4	NNC	ENSG00000179168.15	novel	369	4	NA	NA	-271	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.35702260395516	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCCAGCAGCCTGTCAATC	-38388289	False	NA	-7	True	AATAAA	-14	NA	38388353	38384352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38384530_38385420_38385501_38387760_38387823_38388186
transcript_72739.nnic	chr19	+	1047	4	NIC	ENSG00000188766.13	novel	478	5	NA	NA	33	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	4.10960933531265	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAATGGATGAACAAAT	38388435	False	NA	NA	False	AATAAA	-17	NA	38388453	38392647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_38388808_38390298_38390387_38391945_38392115_38392211
transcript_7274.nnic	chr1	+	1652	2	Genic_Genomic	ENSG00000235089.1	novel	643	1	NA	NA	-110378	48	multi-exon	FALSE	canonical	0	0	junction_1	0	233	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGATGTCTTTCAGCAGA	NA	False	NA	NA	False	AATAAA	-24	NA	81098189	81209258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_81099079_81208495
transcript_72741.nnic	chr19	+	915	4	ISM	ENSG00000188766.13	ENST00000691638.1	4790	6	-18	6940	-18	0	5prime_fragment	FALSE	canonical	2	5	junction_2	4.96655480858378	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAATGGATGAACAAAT	38388336	True	NA	NA	False	AATAAA	-17	NA	38388678	38392647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_38388808_38390298_38390480_38391945_38392115_38392211
transcript_72745.known	chr19	+	560	2	FSM	ENSG00000188766.13	ENST00000590962.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGTAAATGGATGAACAAAT	38391648	False	NA	NA	False	AATAAA	-17	NA	38391990	38392647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38392115_38392211
transcript_72746.nnic	chr19	+	1176	7	NNC	ENSG00000130244.13	novel	1313	8	NA	NA	13	0	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	20.4837333836714	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTAGGACCTCTCTCTGT	38402481	True	NA	8	True	AATAAA	-15	NA	38403199	38409084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38403338_38403559_38403695_38404907_38405114_38405343_38405422_38405518_38405636_38406909_38407078_38408750
transcript_72748.nnic	chr19	-	1002	7	NNC	ENSG00000171777.16	novel	4074	13	NA	NA	-13	-6980	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	4.53382350291181	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGCACTTAGTAAGTGCTC	-38426093	True	NA	NA	False	AATAAA	-25	NA	38426232	38419394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38419593_38419859_38420014_38420130_38420263_38420907_38420970_38421093_38421201_38421968_38422154_38426068
transcript_72753.nnic	chr19	-	774	3	NNC	ENSG00000171777.16	novel	2651	14	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	6	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACATGGTTCTTGGTATTG	-38426093	True	NA	-7	True	ATTAAA	-14	NA	38426232	38409057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38409613_38422098_38422154_38426068
transcript_72759.nnic	chr19	+	1127	10	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-71	-20815	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_9	6.73300329224139	80	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTAGCCGGGTGTGGTGG	NA	False	NA	4	True	AATAAA	-20	NA	38433619	38447071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_72762.nic	chr19	+	1316	9	ISM	ENSG00000196218.14	ENST00000599547.6	11455	80	-210	88318	-71	-20812	5prime_fragment	FALSE	canonical	3	7	junction_1	6.07762289057161	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGTGTGGTGGTGT	NA	False	NA	7	True	AATAAA	-23	NA	38433619	38447074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_38433875_38440744_38440865_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693
transcript_72763.nnic	chr19	+	976	9	NNC	ENSG00000196218.14	novel	11455	80	NA	NA	-40	-20815	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	7.95986023746648	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTAGCCGGGTGTGGTGG	38431787	True	NA	4	True	AATAAA	-20	NA	38433650	38447071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_38433875_38442348_38442454_38443557_38443633_38443717_38443797_38444148_38444262_38444583_38444678_38446471_38446566_38446693_38446769_38446954
transcript_72768.known	chr19	-	552	2	FSM	ENSG00000268055.2	ENST00000595853.2	571	2	14	5	14	-5	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGATTCTGAGTGAGTCTCT	NA	False	NA	NA	False	AATAAA	-16	NA	38537128	38535516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38535935_38536994
transcript_72777.nnic	chr19	-	654	6	NNC	ENSG00000104814.13	novel	2700	32	NA	NA	-509	0	at_least_one_novel_splicesite	TRUE	canonical	2	15	junction_2	32.2639117281213	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596180	False	NA	-3	True	AATAAA	-19	NA	38596239	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38589177_38589276_38593281_38593338_38595484_38595556_38595639_38595730_38596077
transcript_72781.nnic	chr19	-	594	6	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-484	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	42.1264762352609	156	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596155	False	NA	-3	True	AATAAA	-19	NA	38596214	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938_38596002_38596077
transcript_72793.nic	chr19	-	582	5	ISM	ENSG00000104814.13	ENST00000591921.1	1625	18	13508	-59	-396	0	3prime_fragment	FALSE	canonical	3	26	junction_4	31.6464847968933	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595501	True	NA	-3	True	AATAAA	-19	NA	38596126	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38595938
transcript_72794.nnic	chr19	-	556	5	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-509	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_4	22.8089894559141	637	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596180	False	NA	-3	True	AATAAA	-19	NA	38596239	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596077
transcript_72795.nnic	chr19	-	875	5	NIC	ENSG00000104814.13	novel	2631	31	NA	NA	301	0	combination_of_known_splicesites	FALSE	canonical	2	4	junction_4	40.7952203082665	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	NA	False	NA	-3	True	AATAAA	-19	NA	38596792	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38587818_38593281_38593338_38595484_38595556_38595639_38595730_38596311
transcript_72797.nnic	chr19	-	436	4	NNC	ENSG00000104814.13	novel	443	5	NA	NA	-479	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	45.4923681023043	101	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596150	False	NA	-3	True	AATAAA	-19	NA	38596209	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595556_38596077
transcript_72800.nnic	chr19	-	640	4	NNC	ENSG00000104814.13	novel	2631	31	NA	NA	-509	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_3	26.1661358757205	385	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38596180	False	NA	-3	True	AATAAA	-19	NA	38596239	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_38587818_38593281_38593338_38595484_38595730_38596077
transcript_72805.known	chr19	+	516	3	FSM	ENSG00000267291.1	ENST00000589557.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	38596288	True	NA	11	True	AATACA	-17	NA	38596345	38601694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38596437_38597252_38597396_38601412
transcript_72812.nic	chr19	+	1371	2	NIC	ENSG00000267291.1	novel	516	3	NA	NA	-39	0	intron_retention	FALSE	canonical	3	13	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCTTTTCAGTTTGTTT	38596249	True	NA	11	True	AATACA	-17	NA	38596306	38601694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_38597396_38601412
transcript_72813.known	chr19	-	443	5	FSM	ENSG00000104814.13	ENST00000593196.1	443	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	46.284446631671	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATCTTGTTTTTCTTGG	-38595671	False	32	-3	True	AATAAA	-19	NA	38595730	38587640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38587818_38592449_38592498_38593281_38593338_38595484_38595556_38595639
transcript_72817.known	chr19	+	760	8	FSM	ENSG00000178982.10	ENST00000593149.5	760	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	932.685589125974	1654	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572355	True	NA	16	True	AATAAA	-16	NA	38619094	38636953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619224_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_72825.known	chr19	+	780	7	FSM	ENSG00000178982.10	ENST00000614624.4	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	969.971649070219	1591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTGTCTCCTCCCTGGCT	38572342	True	NA	18	True	AATAAA	-18	NA	38619081	38636955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_72843.known	chr19	+	772	8	FSM	ENSG00000178982.10	ENST00000248342.9	772	8	0	0	0	0	multi-exon	FALSE	canonical	3	2115	junction_7	263.201947762782	28595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTACTGTCTCCTCCCTGGC	38572448	True	NA	17	True	AATAAA	-17	NA	38619187	38636954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38632600_38632679_38634992_38635119_38636888
transcript_72844.known	chr19	+	670	7	FSM	ENSG00000178982.10	ENST00000592558.1	670	7	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_5	920.778595658165	3410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTACTGTCTCCTCCCTGG	38572471	True	NA	16	True	AATAAA	-16	NA	38619210	38636953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38632429_38632497_38634992_38635119_38636888
transcript_72845.known	chr19	+	501	5	FSM	ENSG00000178982.10	ENST00000588934.5	501	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1181.2813752447	266	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTACTGTCTCCTCCCTG	38572446	True	NA	15	True	AATAAA	-15	NA	38619185	38636952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38636888
transcript_72846.known	chr19	+	507	4	FSM	ENSG00000178982.10	ENST00000588422.3	507	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	1249.60553775982	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTGGCGGTGGGCCC	38572456	True	NA	NA	False	NA	NA	NA	38619195	38626192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619318_38620336_38620436_38624076_38624198_38626027
transcript_72847.known	chr19	+	704	5	FSM	ENSG00000178982.10	ENST00000593062.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1180.85403416341	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTGATTTCTTTATTT	38572446	True	NA	NA	False	NA	NA	NA	38619185	38630968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38619328_38620336_38620436_38624076_38624198_38626027_38626103_38630701
transcript_72848.known	chr19	+	4990	21	FSM	ENSG00000130402.13	ENST00000252699.7	4990	21	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_8	32.8941864164475	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTTTCCTTACAGTCTA	38611851	True	NA	NA	False	AATATA	-17	NA	38647648	38731589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38710256_38710343_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_72849.known	chr19	+	2923	21	FSM	ENSG00000130402.13	ENST00000424234.7	2923	21	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_8	28.5367745199068	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGTCCTCCGGGGTGGGT	38611862	True	NA	NA	False	NA	NA	NA	38647659	38729533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38727945_38728027_38728995_38729155_38729273
transcript_72850.known	chr19	+	4958	21	FSM	ENSG00000130402.13	ENST00000440400.2	4958	21	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_18	42.4985587990934	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAGTCAGTTTCCTTAC	38611862	True	NA	NA	False	AATATA	-11	NA	38647659	38731583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38647908_38700599_38700715_38701001_38701122_38704933_38705021_38706043_38706132_38708116_38708196_38709394_38709477_38711275_38711362_38714468_38714562_38717085_38717317_38717926_38718075_38721537_38721689_38723613_38723723_38723936_38724078_38724156_38724340_38724430_38724566_38725723_38725904_38726956_38727104_38728315_38728382_38728995_38729155_38729273
transcript_72852.nic	chr19	-	1384	9	ISM	ENSG00000182472.9	ENST00000328867.9	3129	21	8788	-5	-9	0	3prime_fragment	TRUE	canonical	3	6	junction_8	6.30352084156148	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735398	False	288	-3	True	AATAAA	-38	NA	38735686	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735369_38735430_38735501
transcript_72853.nic	chr19	-	1476	8	ISM	ENSG00000182472.9	ENST00000328867.9	3129	21	8768	-5	-29	0	intron_retention	FALSE	canonical	3	7	junction_5	6.22699849077239	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735418	False	NA	-3	True	AATAAA	-38	NA	38735706	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38734812_38734871_38735369
transcript_72856.nic	chr19	-	1321	8	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_4	7.14856914468389	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735398	False	288	-3	True	AATAAA	-38	NA	38735686	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734318_38734390_38734812_38734871_38735369_38735430_38735501
transcript_72857.known	chr19	-	1118	7	FSM	ENSG00000182472.9	ENST00000593700.5	1118	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	7.90920701180312	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAATCAGAATAAACTCAAA	-38735389	False	288	NA	False	AAGAAA	-6	NA	38735677	38730457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734141_38734205_38734318_38734390_38735369
transcript_72861.nic	chr19	-	1250	7	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	6.89605362185907	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735398	False	288	-3	True	AATAAA	-38	NA	38735686	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369_38735430_38735501
transcript_72864.known	chr19	-	1046	6	FSM	ENSG00000182472.9	ENST00000594552.5	1046	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	6.55438784326958	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735122	False	76	-3	True	AATAAA	-38	NA	38735410	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735369
transcript_72865.nnic	chr19	-	1190	6	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_5	8.42852300228219	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735398	False	288	-3	True	AATAAA	-38	NA	38735686	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38734812_38734871_38735501
transcript_72866.known	chr19	-	896	5	FSM	ENSG00000182472.9	ENST00000597987.5	896	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	8.5841423566947	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGACGGCAGAGATATGT	-38735117	False	NA	-90	True	NA	NA	NA	38735405	38730273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735369
transcript_72867.nnic	chr19	-	1161	5	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	8.1700673191841	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735427	False	NA	-3	True	AATAAA	-38	NA	38735715	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38733702_38733782_38735501
transcript_72869.known	chr19	-	488	5	FSM	ENSG00000182472.9	ENST00000595177.1	488	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	9.12071817347735	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAACAAGAACAGCGACAGC	-38735134	False	76	NA	False	NA	NA	NA	38735422	38730677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38730879_38730964_38731024_38731106_38731224_38734812_38734871_38735369
transcript_72870.nnic	chr19	-	1185	4	NIC	ENSG00000182472.9	novel	1046	6	NA	NA	-9	0	intron_retention	FALSE	canonical	0	0	junction_3	10.3708994574027	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735398	False	288	-3	True	AATAAA	-38	NA	38735686	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38735369
transcript_72871.nnic	chr19	-	1053	4	NIC	ENSG00000182472.9	novel	2381	20	NA	NA	-9	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	10.3708994574027	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAATTCTTTCTTTTT	-38735398	False	288	-3	True	AATAAA	-38	NA	38735686	38730186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_38730879_38730964_38731024_38731106_38731224_38735501
transcript_72876.known	chr19	-	494	4	FSM	ENSG00000205076.5	ENST00000378626.5	494	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	16.2685791225499	224	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACTGTGTCTGTGTCCCAT	NA	False	NA	NA	False	AATAAA	-17	NA	38773517	38770967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38771140_38771828_38772031_38773014_38773104_38773486
transcript_72880.known	chr19	+	532	2	FSM	ENSG00000178934.5	ENST00000600304.1	532	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCGACTGTGTCTGTGTCC	NA	False	NA	NA	False	AATAAA	-14	NA	38790527	38791748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38790891_38791579
transcript_72881.known	chr19	+	499	4	FSM	ENSG00000178934.5	ENST00000314980.5	499	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	15.084944665313	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTCTGTGTCCCATTCA	NA	False	NA	NA	False	AATAAA	-20	NA	38789199	38791754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38789233_38789615_38789705_38790688_38790891_38791579
transcript_72886.known	chr19	-	2142	13	FSM	ENSG00000104824.18	ENST00000221419.10	2142	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	437.817908305877	1022	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTCTGCTTTTCTCCCTCTC	-38804812	True	NA	1	True	AATAAA	-43	NA	38849986	38836369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38849699
transcript_72888.known	chr19	-	1633	13	FSM	ENSG00000104824.18	ENST00000600873.5	1633	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	580.438118770832	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTCCTTTTTTTTTT	-38850706	True	NA	-28	True	NA	NA	NA	38852338	38836634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_72913.known	chr19	-	1200	10	FSM	ENSG00000104823.9	ENST00000221418.9	1200	10	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_8	64.5407326642602	6953	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	-38821993	True	NA	NA	False	AATAAA	-14	NA	38831794	38815421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38815718_38815856_38816008_38816283_38816356_38816452_38816524_38817064_38817130_38817315_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_72914.known	chr19	-	710	2	FSM	ENSG00000104823.9	ENST00000601333.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	1860	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGTGCCCTTCTTGGATA	-38816241	False	NA	NA	False	AATAAA	-14	NA	38816270	38815421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38815718_38815856
transcript_72915.known	chr19	-	560	5	FSM	ENSG00000104823.9	ENST00000595470.1	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	1732	junction_3	78.5855425635021	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTCGGGTGCTCCCCAGG	-38821988	True	NA	NA	False	GGGGCT	-33	NA	38831789	38817295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38817365_38817450_38817576_38831077_38831167_38831308_38831517_38831720
transcript_72916.known	chr19	-	493	2	FSM	ENSG00000269688.1	ENST00000600473.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAAGGTG	-38845485	False	NA	NA	False	NA	NA	NA	38845499	38844728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38844935_38845212
transcript_72917.known	chr19	-	1952	14	FSM	ENSG00000104824.18	ENST00000388749.7	1952	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	710.961254447416	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGCACTTGCTGGGATTC	-38850715	True	NA	-24	True	AATAAA	-18	NA	38852347	38836394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38836781_38837383_38837480_38837593_38837652_38838396_38838599_38838893_38839016_38840095_38840377_38840487_38840560_38841612_38841683_38843841_38843915_38844007_38844105_38845649_38845736_38845852_38846091_38847315_38847435_38852295
transcript_72923.known	chr19	-	1810	3	FSM	ENSG00000187994.14	ENST00000593424.5	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	3.5	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAACTTTGTATGTTTGTGT	-38869242	True	NA	-9	True	ATTAAA	-18	NA	38870043	38867833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38869411_38869572_38869705_38869942
transcript_72924.known	chr19	-	1862	16	FSM	ENSG00000068903.21	ENST00000249396.12	1862	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	18.9215926038657	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCGGTCTGGCCTCCTGTTT	-38898924	True	NA	-5	True	ATTAAA	-19	NA	38899618	38878559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38898378_38898426_38899505
transcript_72926.known	chr19	-	2062	15	FSM	ENSG00000068903.21	ENST00000392081.6	2062	15	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_12	6.9045976991969	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTCTGGCCTCCTGTTTCTT	NA	False	NA	-2	True	ATTAAA	-22	NA	38899862	38878556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38879311_38879433_38879501_38879631_38879703_38880684_38880737_38880820_38880898_38881099_38881156_38881431_38881492_38883626_38883757_38889086_38889156_38889688_38889746_38889854_38889962_38890102_38890145_38893413_38893528_38893818_38893868_38899505
transcript_72931.known	chr19	+	1192	6	FSM	ENSG00000104825.17	ENST00000313582.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_5	52.9626283335712	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	38894890	True	NA	16	True	AATAAA	-21	NA	38899968	38908889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_72933.nic	chr19	+	1134	6	NIC	ENSG00000104825.17	novel	1192	6	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	136.589018592272	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	38894892	True	NA	16	True	AATAAA	-21	NA	38899970	38908889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_72934.nic	chr19	+	975	6	NIC	ENSG00000104825.17	novel	1192	6	NA	NA	18	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	148.138583765338	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGAGACCAGACTGATCTT	38894919	True	NA	16	True	AATAAA	-21	NA	38899997	38908889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_38900080_38905070_38905121_38905201_38905536_38907220_38907310_38907398_38907660_38908730
transcript_72935.known	chr19	+	1929	5	FSM	ENSG00000104825.17	ENST00000572515.5	1929	5	0	0	0	0	multi-exon	FALSE	canonical	3	326	junction_1	28.9525473836069	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	38894873	True	NA	NA	False	NA	NA	NA	38899951	38908538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38900212_38905014_38905121_38905201_38905536_38907220_38907310_38907398
transcript_72937.known	chr19	+	2200	5	FSM	ENSG00000104825.17	ENST00000509705.3	2200	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	151.466993104108	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCAGACTGATCTTGTCT	38894901	True	NA	20	True	AATAAA	-25	NA	38899979	38908893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38900212_38905070_38905121_38905201_38905536_38907220_38907310_38907398
transcript_72938.known	chr19	-	1085	5	FSM	ENSG00000262484.2	ENST00000571838.2	1085	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCCTCCGTGAGCAGCA	-38912149	False	NA	-3	True	AATAAA	-16	NA	38912186	38908979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38909326_38910562_38911084_38911565_38911654_38911811_38911853_38912097
transcript_7294.nnic	chr1	-	1061	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-63	-287455	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.5	31	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	82848268	82823458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82824283_82833947_82834060_82848143
transcript_72940.known	chr19	-	1630	17	FSM	ENSG00000104835.15	ENST00000600042.5	1630	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	147.301548171599	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTCAGGAGACCCCGGAC	-38924878	True	NA	NA	False	NA	NA	NA	38930761	38915563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917834_38917920_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921597_38922001_38922079_38922237_38922268_38926204_38926301_38930469
transcript_72944.known	chr19	-	1886	16	FSM	ENSG00000104835.15	ENST00000430193.7	1886	16	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_5	92.9758869576169	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGCAAAAAGTCCCCAATAAA	-38924875	True	NA	-42	True	NA	NA	NA	38930758	38915298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38915750_38915840_38915907_38916036_38916130_38916220_38916315_38917723_38917828_38917914_38918009_38918093_38918140_38918421_38918531_38918765_38918814_38919761_38919868_38920085_38920150_38921391_38921447_38921526_38921668_38922237_38922268_38926204_38926301_38930469
transcript_72964.known	chr19	-	462	4	FSM	ENSG00000161243.9	ENST00000595166.1	462	4	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_1	9.7410927974683	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTTTGTGTCTTTCGAACA	-39031116	False	NA	NA	False	NA	NA	NA	39031402	39025518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39025555_39026869_39027006_39031028_39031125_39031208
transcript_72966.known	chr19	-	1022	3	FSM	ENSG00000104835.15	ENST00000598598.5	1022	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	1.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGGGAGATCCGGAAGGAGC	-38924880	True	NA	NA	False	NA	NA	NA	38930763	38921635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_38922268_38926204_38926301_38930469
transcript_72969.known	chr19	+	1220	2	FSM	ENSG00000128626.12	ENST00000407800.2	1220	2	0	0	0	0	multi-exon	FALSE	canonical	3	892	junction_1	0	849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCACGGAGGGCTCTTTT	38917320	True	NA	31	True	ATTAAA	-22	NA	38930953	38933162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38931344_38932332
transcript_7297.nnic	chr1	-	707	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-63	-208169	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10	39	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTGTTTATGATTTAAAAT	NA	False	NA	NA	False	AATAAA	-14	NA	82848268	82744172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82744643_82833947_82834060_82848143
transcript_72970.known	chr19	+	959	3	FSM	ENSG00000128626.12	ENST00000308018.9	959	3	0	0	0	0	multi-exon	FALSE	canonical	3	483	junction_1	204.5	3685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCTCTTTTTTTTTT	38917310	True	NA	37	True	ATTAAA	-28	NA	38930943	38933168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38930999_38931275_38931344_38932332
transcript_72971.known	chr19	+	929	3	FSM	ENSG00000128626.12	ENST00000402029.3	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	294.5	4067	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCTTGTGGAGTATTTGC	38917365	True	NA	26	True	AATAAA	-26	NA	38930998	38933020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_38931172_38931275_38931344_38932332
transcript_72973.nic	chr19	+	2831	10	NIC	ENSG00000130669.17	novel	3025	11	NA	NA	1	0	combination_of_known_junctions	TRUE	canonical	3	159	junction_2	75.9338568576887	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116099	True	NA	5	True	ATTAAA	-15	NA	39125782	39179402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_39125920_39168229_39168303_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_72974.known	chr19	+	2739	9	FSM	ENSG00000130669.17	ENST00000358301.7	2739	9	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	89.0216792416319	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGTGCGATGTGT	39116118	True	NA	5	True	ATTAAA	-15	NA	39125801	39179402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39125920_39169531_39169758_39172917_39173377_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_72975.known	chr19	+	5735	9	FSM	ENSG00000130669.17	ENST00000599386.5	5735	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	136.371677319743	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAGACAAAA	39116150	True	NA	NA	False	NA	NA	NA	39125833	39182816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39125920_39168229_39168303_39169531_39169758_39173575_39174011_39174930_39175065_39175311_39175439_39176589_39176716_39177674_39177810_39178423
transcript_72978.known	chr19	-	614	7	FSM	ENSG00000130755.13	ENST00000597595.6	614	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.28521820013368	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	-39335971	False	NA	-1	True	AATAAA	-23	NA	39336043	39328358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335260_39335311_39335434_39335532_39335973
transcript_72980.nnic	chr19	-	1012	7	Fusion	ENSG00000269246.1_ENSG00000130755.13	novel	614	7	NA	NA	-39	0	multi-exon	FALSE	canonical	0	0	junction_6	2.28521820013368	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGATCCTCAGTTTGG	-39341912	True	NA	-7	True	AATAAA	-17	NA	39341984	39328364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335260_39335311_39335434_39335532_39341510
transcript_72981.known	chr19	-	497	6	FSM	ENSG00000130755.13	ENST00000601387.5	497	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.41660919471891	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTTGGACTCAGTTTCTG	-39335945	False	NA	5	True	AATAAA	-29	NA	39336017	39328352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335260_39335311_39335973
transcript_72982.known	chr19	-	526	6	FSM	ENSG00000130755.13	ENST00000595207.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.57681974534502	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCCTCAGTTTGGACTCAG	-39335933	False	NA	-1	True	AATAAA	-23	NA	39336005	39328358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335434_39335532_39335973
transcript_72984.known	chr19	-	487	6	FSM	ENSG00000130755.13	ENST00000595636.1	487	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.748331477354788	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTTTAAAATGCAAAAAC	-39335952	False	NA	-26	True	TTTAAA	-2	NA	39336024	39328383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39333076_39333127_39335260_39335311_39335434_39335532_39335973
transcript_72986.nnic	chr19	-	503	5	NNC	ENSG00000130755.13	novel	423	5	NA	NA	750	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.87082869338697	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGATCCTCAGTTTGG	-39341550	False	NA	-7	True	AATAAA	-17	NA	39341622	39328364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39341510
transcript_72988.known	chr19	-	173	1	FSM	ENSG00000269246.1	ENST00000599274.1	173	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	80	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGGTTGTGATCTGTGCG	-39341873	True	NA	-1	True	AATAAA	-19	NA	39341945	39341772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39341800_39341900
transcript_72989.known	chr19	-	423	5	FSM	ENSG00000130755.13	ENST00000602185.5	423	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.54950975679639	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGGAGATCCTCAGTTTGG	-39335933	False	NA	-7	True	AATAAA	-17	NA	39336005	39328364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39328549_39328999_39329074_39329543_39329627_39333076_39333127_39335973
transcript_72992.known	chr19	+	578	1	FSM	ENSG00000179134.16	ENST00000596271.1	578	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTGACCTTCGTTGTGC	39385104	False	NA	7	True	AAAACA	-14	NA	39385120	39385698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39385100_39385700
transcript_72993.known	chr19	-	2200	14	FSM	ENSG00000006712.15	ENST00000221265.8	2200	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_10	15.4693818605634	620	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTCTTCTCCAACAGCGA	-39388227	True	NA	NA	False	ATTAAA	-20	NA	39391106	39385628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39386404_39386481_39386573_39386693_39386800_39388338_39388468_39388559_39388677_39388761_39388866_39388946_39389016_39389092_39389199_39389281_39389384_39389479_39389547_39389639_39389762_39390068_39390162_39390259_39390290_39390817
transcript_72994.known	chr19	+	3590	4	FSM	ENSG00000063322.15	ENST00000315588.11	3590	4	0	0	0	0	multi-exon	FALSE	canonical	3	453	junction_2	24.5356882927706	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTATTCTTGTTTATAT	39385224	True	NA	93	True	ATTAAA	-15	NA	39391377	39400641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39391639_39392463_39392523_39393552_39393638_39397456
transcript_72996.known	chr19	+	2941	3	FSM	ENSG00000063322.15	ENST00000599417.2	2941	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	226	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCCAAGGCCTGTATTT	39391202	False	NA	-77	True	NA	NA	NA	39391302	39399976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39391639_39393552_39393638_39397456
transcript_72997.known	chr19	+	1747	2	FSM	ENSG00000128016.7	ENST00000597629.3	1747	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGATCCTGGCTTCTTC	39404036	True	NA	4	True	AATAAA	-15	NA	39406846	39409407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39406929_39407742
transcript_72998.known	chr19	+	1699	2	FSM	ENSG00000128016.7	ENST00000652583.1	1699	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTTGGGCATTTTTAA	39404047	False	NA	-35	True	AATATA	-38	NA	39406857	39409368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39406933_39407744
transcript_72999.nnic	chr19	-	975	2	Antisense	novelGene_ENSG00000090924.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGCCTGGCTTCCTTTAG	NA	False	NA	NA	False	AATAAA	-14	NA	39413444	39411737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_39412423_39413154
transcript_73.known	ERCC-00150	+	727	1	FSM	ERCC-00150A	DQ883659	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00150_+_0_700
transcript_7300.nic	chr1	-	360	3	ISM	ENSG00000233290.3	ENST00000650063.1	4247	7	-63	601669	-63	-278078	5prime_fragment	FALSE	canonical	1	2	junction_1	9	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTCTGTGGCACTGTGT	NA	False	NA	NA	False	AATAAA	-21	NA	82848268	82814081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_82814205_82833947_82834060_82848143
transcript_73001.nnic	chr19	-	610	2	Antisense	novelGene_ENSG00000090924.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAGATGAATGAACGTTTC	NA	False	NA	NA	False	AATAAA	-22	NA	39413444	39412102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_39412423_39413154
transcript_7301.nnic	chr1	-	823	3	NNC	ENSG00000233290.3	novel	4247	7	NA	NA	-63	-287693	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	8.5	50	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGTTTTTCTGTGTATGC	NA	False	NA	NA	False	AATAAA	-38	NA	82848268	82823696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_82824283_82833947_82834060_82848143
transcript_73037.known	chr19	-	631	5	FSM	ENSG00000105193.9	ENST00000251453.8	631	5	0	0	0	0	multi-exon	TRUE	canonical	3	8683	junction_4	207.89104718578	105614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAGTCTGGATTTTGACC	-39297445	True	NA	-17	True	AGTAAA	-15	NA	39435949	39433136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435606_39435709_39435847
transcript_73038.known	chr19	-	492	5	FSM	ENSG00000105193.9	ENST00000601655.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_3	3601.52124108688	12332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCAAGAACTGTGTGTGG	-39297437	True	NA	-24	True	AATAAA	-22	NA	39435941	39433216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39433762_39435657_39435709_39435847
transcript_73039.known	chr19	-	643	4	FSM	ENSG00000105193.9	ENST00000339471.8	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	239.708619415786	2294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297432	True	NA	-14	True	AATAAA	-32	NA	39435936	39433206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433762_39435606_39435709_39435847
transcript_73040.known	chr19	-	555	5	FSM	ENSG00000105193.9	ENST00000599539.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	3874.72547414652	1457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTGGCCTTATGTGT	-39297411	True	NA	-14	True	AATAAA	-32	NA	39435915	39433206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433493_39433570_39433664_39433762_39435606_39435709_39435847
transcript_73041.known	chr19	-	407	4	FSM	ENSG00000105193.9	ENST00000599705.1	407	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4280.40893685015	3384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTCACTTGTATAATA	-39435538	False	NA	-67	True	NA	NA	NA	39435705	39433259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433517_39433570_39433664_39433762_39435606
transcript_73042.known	chr19	-	444	2	FSM	ENSG00000105193.9	ENST00000602153.5	444	2	0	0	0	0	multi-exon	FALSE	canonical	3	8900	junction_1	0	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-39433748	False	NA	-30	True	AATAAA	-16	NA	39433761	39433222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433570_39433664
transcript_73043.known	chr19	-	2389	4	FSM	ENSG00000105193.9	ENST00000601390.1	2389	4	0	0	0	0	multi-exon	FALSE	canonical	3	8683	junction_3	91.7327034862098	2799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAAGTTTCAAGAACTGT	-39297444	True	NA	-30	True	AATAAA	-16	NA	39435948	39433222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39433419_39433521_39433570_39433664_39435709_39435847
transcript_73044.known	chr19	+	3678	30	FSM	ENSG00000196235.14	ENST00000432763.7	3678	30	0	0	0	0	multi-exon	TRUE	canonical	3	387	junction_1	87.9080700235623	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430149	True	NA	31	True	AATAAA	-22	NA	39445581	39476670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_73045.known	chr19	+	3742	29	FSM	ENSG00000196235.14	ENST00000598725.5	3742	29	0	0	0	0	multi-exon	FALSE	canonical	3	529	junction_13	78.2396566809378	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430251	True	NA	31	True	AATAAA	-22	NA	39445683	39476670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39445966_39453355_39453522_39457674_39457741_39458293_39458306_39458817_39458888_39459004_39459074_39459183_39459250_39459558_39459590_39459891_39459961_39464797_39465050_39466479_39466570_39466674_39466746_39468755_39468862_39469078_39469173_39469261_39469399_39470118_39470275_39470376_39470524_39471356_39471504_39471604_39471731_39472408_39472494_39472809_39472930_39473011_39473115_39473202_39473331_39473415_39473522_39473962_39474122_39474233_39474403_39474514_39474719_39476080_39476177_39476255
transcript_73063.nnic	chr19	+	1247	8	NNC	ENSG00000196235.14	novel	3678	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	280.429262789338	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430125	True	NA	31	True	AATAAA	-22	NA	39445557	39476670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_39445638_39445803_39445966_39453355_39453522_39457674_39457706_39474309_39474403_39474514_39474719_39476080_39476177_39476255
transcript_73089.nnic	chr19	+	427	4	NNC	ENSG00000196235.14	novel	3678	30	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	263.93559820532	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCGTGTGTGTGTGTGTGT	39430125	True	NA	31	True	AATAAA	-22	NA	39445557	39476670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_39445638_39445803_39445966_39453355_39453458_39476587
transcript_7309.nnic	chr1	-	595	2	Antisense	novelGene_ENSG00000230817.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTGTGCATTTACGGC	-83182468	True	NA	2	True	ATTAAA	-18	NA	83182628	82990432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_82990569_83182169
transcript_7311.nnic	chr1	-	470	2	Genic_Genomic	ENSG00000271576.1	novel	1601	1	NA	NA	-8	-974	multi-exon	FALSE	canonical	0	0	junction_1	0	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCGTTTTTATTAATATA	-84077356	True	NA	1	True	AATAAA	-18	NA	84077939	84077304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_84077643_84077807
transcript_73118.known	chr19	+	786	4	FSM	ENSG00000105197.11	ENST00000599794.5	786	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	640.640825007794	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATACATCTCCCTCTGACCA	39459782	True	NA	-13	True	NA	NA	NA	39480840	39490119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39480962_39488060_39488218_39488538_39488646_39489718
transcript_7312.nnic	chr1	-	419	2	Genic_Genomic	ENSG00000271576.1	novel	1601	1	NA	NA	-30	-974	multi-exon	FALSE	canonical	1	2	junction_1	0	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGCGTTTTTATTAATATA	-84077950	False	NA	1	True	AATAAA	-18	NA	84077961	84077304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_84077643_84077880
transcript_73121.known	chr19	+	1704	6	FSM	ENSG00000186838.14	ENST00000335426.8	1704	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	4.77493455452533	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCCTGTGGTCCCAGCTAT	39514591	False	NA	17	True	AATAAA	-24	NA	39515112	39520686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39516022_39518607_39518633_39518739_39518794_39518902_39518978_39519070_39519171_39520145
transcript_7313.known	chr1	-	1601	1	FSM	ENSG00000271576.1	ENST00000605506.1	1601	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	114	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTTGTGTGCATAATTTG	-84077348	True	NA	NA	False	AATAAA	-19	NA	84077931	84076330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84076300_84077900
transcript_73131.known	chr19	+	481	4	FSM	ENSG00000186838.14	ENST00000600586.1	481	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	10.077477638554	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTCCAGTCTGACT	39515788	False	NA	4	True	AATACA	-14	NA	39515813	39520264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39516022_39518739_39518794_39519070_39519171_39520145
transcript_73135.nnic	chr19	+	974	3	NIC	ENSG00000186838.14	novel	481	4	NA	NA	108	0	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	11.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGTGTCCAGTCTGACT	39515209	False	NA	4	True	AATACA	-14	NA	39515220	39520264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_39516022_39518739_39518794_39520145
transcript_73136.nnic	chr19	+	1385	3	NIC	ENSG00000186838.14	novel	481	4	NA	NA	108	-11	combination_of_known_splicesites	FALSE	canonical	2	9	junction_2	11.5	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTGGTGTGTGCCTGTG	39515209	False	NA	6	True	AATAAA	-13	NA	39515220	39520675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_39516022_39518739_39518794_39520145
transcript_73139.known	chr19	+	645	2	FSM	ENSG00000186838.14	ENST00000597876.1	645	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGGGAGAGGGGGGTG	39514618	True	NA	NA	False	NA	NA	NA	39515445	39518808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39516022_39518739
transcript_7314.known	chr1	+	4513	10	FSM	ENSG00000142875.20	ENST00000370689.6	4513	10	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	11.9917667228729	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTGAGTCGTGAATTCT	84076208	True	NA	18	True	ATTAAA	-23	NA	84078061	84238498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84214152_84214318_84235179
transcript_73140.known	chr19	-	281	2	FSM	ENSG00000176401.6	ENST00000601837.1	281	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGTGGTGGCACGCGC	-39529990	False	2853	NA	False	AATAAA	-8	NA	39532843	39531336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39531514_39532739
transcript_73141.known	chr19	+	820	3	FSM	ENSG00000213921.8	ENST00000638280.2	820	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTGCCTGCATTTTCTGA	NA	False	NA	NA	False	AATAAA	-20	NA	39778853	39786291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39778928_39784526_39784679_39785697
transcript_73142.known	chr19	-	772	4	FSM	ENSG00000105204.14	ENST00000601972.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	19.3620476419435	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGGTCGTTATGTTATTTC	-39830994	False	3158	NA	False	TTTAAA	-16	NA	39834152	39830205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39830564_39830663_39830784_39831804_39831969_39834022
transcript_73152.known	chr19	-	805	7	FSM	ENSG00000105202.9	ENST00000594443.5	805	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	1211.24404596633	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATACTGTTGCACGTGTGT	-39797625	True	NA	-54	True	NA	NA	NA	39846370	39834502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840413_39840516_39846290
transcript_73157.known	chr19	-	1125	9	FSM	ENSG00000105202.9	ENST00000221801.8	1125	9	0	0	0	0	multi-exon	FALSE	canonical	3	1735	junction_7	328.285317978127	14374	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-39797634	True	NA	-9	True	ATTAAA	-14	NA	39846379	39834457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39834563_39834667_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840516_39840616_39840788_39846290
transcript_73158.known	chr19	-	877	8	FSM	ENSG00000105202.9	ENST00000601274.5	877	8	0	0	0	0	multi-exon	TRUE	canonical	1	71	junction_6	843.758235031619	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTTGAGCCATATGAAAGA	-39797612	True	NA	NA	False	AAAAAG	-38	NA	39846357	39834716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413_39840510_39840682_39840788_39846290
transcript_73159.known	chr19	-	603	5	FSM	ENSG00000105202.9	ENST00000594309.5	603	5	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_3	835.828929865436	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTGAGTAGATGGAGAG	-39797612	True	NA	NA	False	NA	NA	NA	39846357	39839034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39839206_39840232_39840328_39840413_39840516_39840619_39840788_39846290
transcript_7316.nic	chr1	+	1837	9	NIC	ENSG00000142875.20	novel	1905	9	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_8	33.248120247617	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAAACTAGAATGTGTCTC	84076219	True	NA	6	True	AATAAA	-22	NA	84078072	84205297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204478
transcript_73160.known	chr19	-	896	6	FSM	ENSG00000105202.9	ENST00000595545.5	896	6	0	0	0	0	multi-exon	FALSE	canonical	3	2296	junction_4	138.755035944646	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCATGTCTGCTGCTCATT	-39791696	False	274	-9	True	ATTAAA	-14	NA	39840441	39834457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39834814_39836555_39836669_39837710_39837844_39839034_39839206_39840232_39840328_39840413
transcript_73161.known	chr19	-	12787	28	FSM	ENSG00000275395.7	ENST00000616721.6	12787	28	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	5.39089309809254	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCATTGTGTCTGTCTCAT	-39934437	False	NA	0	True	AATAAA	-20	NA	39934626	39863322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_39863497_39863620_39863893_39866736_39867121_39870215_39870416_39872077_39872652_39873223_39873796_39875387_39875932_39876657_39877275_39877662_39878237_39879554_39879893_39883304_39883447_39885672_39885873_39885990_39886586_39889478_39890072_39891642_39892187_39892910_39893528_39893921_39894496_39895805_39896144_39899555_39899698_39901924_39902125_39902242_39902838_39905730_39906324_39913689_39914258_39915184_39915790_39918071_39918643_39924382_39924733_39927058_39928307_39934563
transcript_73163.known	chr19	+	1754	11	FSM	ENSG00000013275.8	ENST00000157812.7	1754	11	0	0	0	0	multi-exon	TRUE	canonical	3	791	junction_6	110.954945811352	3173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACAATGATGGATATGTTC	39960594	True	NA	NA	False	NA	NA	NA	39971164	39981764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_73165.known	chr19	+	1333	11	FSM	ENSG00000013275.8	ENST00000455878.2	1333	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	306.971089843979	4147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	39960599	True	NA	54	True	AATAAA	-19	NA	39971169	39981441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972461_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980455_39980661_39980718_39981191
transcript_73166.known	chr19	+	1623	10	FSM	ENSG00000013275.8	ENST00000601697.5	1623	10	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_6	105.945478640877	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATTTCTTCTTAGAAGT	39960609	True	NA	54	True	AATAAA	-19	NA	39971179	39981441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980147_39980285_39980718_39981191
transcript_73167.known	chr19	+	1532	10	FSM	ENSG00000013275.8	ENST00000593455.5	1532	10	0	0	0	0	multi-exon	FALSE	canonical	3	791	junction_6	114.842887846348	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTTCTTCAATAAATAGAT	39960599	True	NA	21	True	NA	NA	NA	39971169	39981408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39971239_39972145_39972245_39972368_39972556_39974293_39974441_39974523_39974634_39974734_39974829_39979816_39979985_39980069_39980455_39980661_39980718_39981191
transcript_7317.known	chr1	+	1905	9	FSM	ENSG00000142875.20	ENST00000370688.7	1905	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_8	30.4094454898474	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGATCCTTATATTTA	84076290	True	NA	NA	False	ATTAAA	-20	NA	84078143	84205439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84078372_84179176_84179239_84182199_84182329_84184036_84184136_84185099_84185183_84196615_84196743_84197728_84197825_84202682_84202806_84204481
transcript_73177.known	chr19	+	3426	7	FSM	ENSG00000187187.14	ENST00000600094.5	3426	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1.46249406456535	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAATGAAAAGAAAAAA	39996981	True	NA	NA	False	AATAAA	-18	NA	39997062	40016545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39997158_39997860_39997916_39998247_39998333_40006095_40006183_40007273_40007401_40008469_40008566_40013664
transcript_73178.known	chr19	+	8000	7	FSM	ENSG00000187187.14	ENST00000347077.9	8000	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.86338998124982	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTGGTTTATGTGAATTG	39996978	True	NA	NA	False	AATAAA	-16	NA	39997059	40021038	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39997158_39997860_39997916_39998247_39998411_40006095_40006183_40007273_40007401_40008469_40008566_40013664
transcript_73179.known	chr19	+	626	6	FSM	ENSG00000187187.14	ENST00000599504.5	626	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.33238075793812	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAACATGAATTTGAGAGAC	NA	False	NA	NA	False	AGTAAA	-45	NA	39997035	40013803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_39997158_39997860_39997916_40006095_40006183_40007273_40007401_40008469_40008566_40013664
transcript_73196.known	chr19	-	498	6	FSM	ENSG00000197782.15	ENST00000599972.1	498	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	41.4033815044134	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGATACCTCTGAAGTAA	-40089399	True	NA	-55	True	NA	NA	NA	40090860	40076169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090749
transcript_73197.known	chr19	-	3472	6	FSM	ENSG00000197782.15	ENST00000595687.6	3472	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	35.8586112391431	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAATTTGCACGTTTATTT	-40089427	True	NA	75	True	AATATA	-35	NA	40090888	40073179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090793
transcript_73199.known	chr19	-	467	6	FSM	ENSG00000197782.15	ENST00000601688.5	467	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	31.1897419033887	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTACAACTCTTGGCATT	-40089477	True	NA	-8	True	AGTAAA	-27	NA	40090938	40076122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090165_40090236_40090905
transcript_7320.known	chr1	+	1567	4	FSM	ENSG00000203943.9	ENST00000370673.7	1567	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.49443825784929	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	NA	False	NA	17	True	AATAAA	-17	NA	84298365	84350798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84298568_84303202_84303288_84325636_84325749_84349630
transcript_73201.nic	chr19	-	504	5	NIC	ENSG00000128000.17	novel	8687	5	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_4	16.7705098312484	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	-40054350	True	NA	NA	False	AATAAA	-36	NA	40056231	40036530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_40036627_40047374_40047471_40048669_40048797_40050323_40050378_40056100
transcript_73202.known	chr19	-	401	5	FSM	ENSG00000128000.17	ENST00000598845.5	401	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	22.1359436211787	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTTGGCCTCGAGGCCTTT	-40054275	True	NA	NA	False	AATAAA	-36	NA	40056156	40036530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40036627_40047405_40047474_40048669_40048797_40050323_40050378_40056100
transcript_73204.known	chr19	-	546	5	FSM	ENSG00000197782.15	ENST00000595773.5	546	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	42.5499706227866	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTATTTGCAATACACATAA	-40089477	True	NA	NA	False	NA	NA	NA	40090938	40075973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081915_40083110_40083238_40084744_40084799_40090905
transcript_73206.known	chr19	-	446	5	FSM	ENSG00000197782.15	ENST00000601715.5	446	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	36.7287353444139	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGGCATTGAGGCCTTT	-40088774	False	NA	1	True	AGTAAA	-36	NA	40090235	40076113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40076210_40081818_40081918_40083110_40083238_40084744_40084799_40090165
transcript_73207.nic	chr19	-	528	2	ISM	ENSG00000174521.8	ENST00000311308.7	828	3	885	0	883	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGTGTGGTGTTCTTGGGG	-40217407	False	NA	0	True	AAAACA	-21	NA	40217499	40216057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_40216273_40217186
transcript_73208.known	chr19	-	1145	6	FSM	ENSG00000105219.10	ENST00000599263.6	1145	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	4.40908153700972	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTCTCTGCCCTCATTGG	-40226605	True	NA	-23	True	AATAAA	-20	NA	40226697	40222207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40222473_40223151_40223304_40223387_40223547_40224487_40224644_40224721_40224812_40226374
transcript_7321.nnic	chr1	+	1365	3	NIC	ENSG00000203943.9	novel	1567	4	NA	NA	117	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_1	3	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCAGTGTATCTTTGATC	84298141	True	NA	17	True	AATAAA	-17	NA	84298482	84350798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_84298568_84325636_84325749_84349630
transcript_73210.known	chr19	-	5250	14	FSM	ENSG00000105221.18	ENST00000392038.7	5250	14	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_13	10.5538910068569	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGTGCTGGTGCTTTTGTTT	-40275777	True	NA	-1	True	AATAAA	-18	NA	40285345	40230316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40265221_40265352_40285180
transcript_73212.known	chr19	-	1795	13	FSM	ENSG00000105221.18	ENST00000391844.8	1795	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_12	17.065844706769	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTCGCATTTGGAAG	-40275805	True	NA	NA	False	NA	NA	NA	40285373	40233669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40233952_40235044_40235148_40235262_40235351_40235889_40236105_40236256_40236386_40237968_40238092_40238904_40238974_40240044_40240111_40241937_40242070_40242533_40242688_40255157_40255270_40256925_40257055_40285180
transcript_73217.known	chr19	+	1906	13	FSM	ENSG00000105223.20	ENST00000356508.9	1906	13	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	584.207648348504	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343122	True	NA	14	True	AGTAAA	-14	NA	40348699	40378483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348725_40365552_40365586_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_7322.known	chr1	+	627	2	FSM	ENSG00000249237.5	ENST00000510918.5	627	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAGAAATGATGTGTTGACA	NA	False	NA	NA	False	NA	NA	NA	84344677	84349661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84345274_84349630
transcript_73220.known	chr19	+	2137	13	FSM	ENSG00000105223.20	ENST00000409735.9	2137	13	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_1	417.839175268295	478	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCCTGACTGAGTGG	40343117	True	NA	16	True	AGTAAA	-16	NA	40348694	40378485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348769_40365717_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_73224.nic	chr19	+	2313	13	NIC	ENSG00000105223.20	novel	2180	13	NA	NA	-3	0	intron_retention	FALSE	canonical	3	351	junction_1	359.951810046228	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCCTGTGCCTGACTGAGT	40343104	True	NA	14	True	AGTAAA	-14	NA	40348681	40378483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_40348769_40365552_40365931_40366418_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_73229.known	chr19	+	1966	12	FSM	ENSG00000105223.20	ENST00000409419.5	1966	12	0	0	0	0	multi-exon	TRUE	canonical	3	6	junction_1	469.768186194351	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTACAGCCTGTGCCT	40343100	True	NA	6	True	AGTAAA	-6	NA	40348677	40378475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40348769_40366383_40366511_40366609_40366685_40366772_40366916_40367695_40367880_40369907_40370029_40370109_40370238_40371672_40371874_40374480_40374621_40376608_40376775_40377785_40377886_40377985
transcript_7323.known	chr1	+	1318	2	FSM	ENSG00000285361.1	ENST00000644783.1	1318	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCTAAAACTCACAAAACAC	NA	False	NA	NA	False	NA	NA	NA	84477038	84479157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84478066_84478866
transcript_73239.known	chr19	-	2126	9	FSM	ENSG00000160392.14	ENST00000392035.6	2126	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	27.4226184016042	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCCCCCACTCCTTCA	-40347048	True	NA	-15	True	AATATA	-18	NA	40348386	40321062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341785_40341891_40348323
transcript_73240.known	chr19	-	3611	9	FSM	ENSG00000160392.14	ENST00000683109.1	3611	9	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	11.6619037896906	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	-40347059	True	NA	NA	False	NA	NA	NA	40348397	40319535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348323
transcript_73241.known	chr19	-	3628	9	FSM	ENSG00000160392.14	ENST00000582783.5	3628	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	32.566998249762	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAAGGGCCTGGTAATACC	NA	False	NA	NA	False	NA	NA	NA	40348527	40319535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40322377_40324005_40324077_40326333_40326487_40328412_40328551_40333850_40333930_40336109_40336225_40336319_40336408_40341838_40341891_40348436
transcript_73252.known	chr19	+	694	4	FSM	ENSG00000105223.20	ENST00000493006.1	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	1326	junction_1	187.318504751192	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTTTAAAAGAAAAGAAAA	40353112	True	NA	NA	False	AATACA	-18	NA	40365894	40367263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40365931_40366418_40366511_40366609_40366685_40366772
transcript_73253.nic	chr19	-	801	5	NIC	ENSG00000105227.16	novel	475	3	NA	NA	-37	20	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	4.58257569495584	216	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACCCTGTCTAAACACACAC	-40412757	True	NA	NA	False	AATAAA	-28	NA	40413415	40407265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_40407720_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_73254.nic	chr19	-	773	5	NIC	ENSG00000105227.16	novel	552	2	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	8.64580823289529	75	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAACAAAGAAAAAAAAAA	-40412757	True	NA	NA	False	AATAAA	-5	NA	40413415	40407288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_40407715_40407905_40408032_40408157_40408257_40408339_40408384_40413337
transcript_73257.nic	chr19	-	981	4	ISM	ENSG00000105227.16	ENST00000324001.8	4867	7	-37	13504	-37	14	5prime_fragment	FALSE	canonical	3	19	junction_3	2.49443825784929	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAGACCCTGTCTAAAC	-40412757	True	NA	NA	False	AATAAA	-22	NA	40413415	40407271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_40408032_40408157_40408257_40408339_40408384_40413337
transcript_73259.known	chr19	-	2084	2	FSM	ENSG00000197019.5	ENST00000357949.5	2084	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTGGGCAAAGGATAGGG	-40425723	True	NA	NA	False	AATAAA	-20	NA	40425992	40421588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40423547_40425866
transcript_73260.known	chr19	+	588	1	FSM	ENSG00000277453.1	ENST00000614440.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAATCTTCAGAGTGGG	40426103	False	NA	NA	False	ATTAAA	-9	NA	40426114	40426702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40426100_40426700
transcript_73267.known	chr19	-	747	2	FSM	ENSG00000167565.13	ENST00000599706.1	747	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTTCTTGGGAGTGGAATG	-40443984	False	2840	NA	False	NA	NA	NA	40444062	40441547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40442087_40443854
transcript_73268.known	chr19	-	1364	2	FSM	ENSG00000167565.13	ENST00000322354.4	1364	2	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	0	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTTGTCTAATGTTTCT	-40441495	True	NA	42	True	AATAAA	-17	NA	40444335	40440843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40442087_40444214
transcript_73274.known	chr19	-	767	5	FSM	ENSG00000090013.11	ENST00000643596.1	767	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	186.70632019297	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAACCGACTGTGTGACT	-40463305	True	NA	-11	True	AATAAA	-30	NA	40465759	40447794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40448047_40451363_40451493_40458173_40458245_40458380_40458546_40465609
transcript_73275.known	chr19	-	649	4	FSM	ENSG00000090013.11	ENST00000595483.5	649	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	165.481116747501	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGACTGTGTGACTCTTCCT	-40463291	True	NA	-5	True	AATAAA	-36	NA	40465745	40447788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40448047_40458154_40458245_40458380_40458546_40465609
transcript_73277.known	chr19	+	525	4	FSM	ENSG00000160460.17	ENST00000599926.5	525	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	5.79271573232759	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCCAACACTGAGGACGC	40570901	True	NA	NA	False	NA	NA	NA	40571038	40575663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40571094_40572018_40572193_40572337_40572381_40575410
transcript_73284.known	chr19	+	2341	18	FSM	ENSG00000160410.15	ENST00000291842.10	2341	18	0	0	0	0	multi-exon	TRUE	canonical	3	387	junction_12	33.4805629714587	1089	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTGCTTATTCTTAGCA	40574213	True	NA	15	True	AATAAA	-15	NA	40576872	40591397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_73298.known	chr19	+	572	4	FSM	ENSG00000160410.15	ENST00000599716.5	572	4	0	0	0	0	multi-exon	FALSE	canonical	3	415	junction_1	29.0325487838889	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTTCGATTTCTCCCTA	40574227	True	NA	NA	False	NA	NA	NA	40576886	40577929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40576986_40577230_40577285_40577395_40577442_40577556
transcript_73299.known	chr19	+	2339	16	FSM	ENSG00000160410.15	ENST00000594973.5	2339	16	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_10	34.0642530129949	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATCTTGCTTATTCTTAG	40577218	False	NA	13	True	AATAAA	-13	NA	40577228	40591395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40577442_40577556_40577631_40578153_40578213_40578461_40578543_40580323_40580486_40580565_40580657_40580745_40580937_40582350_40582467_40583397_40583486_40583600_40583718_40586773_40586945_40588623_40588780_40589081_40589179_40590243_40590423_40590729_40590854_40590975
transcript_73300.known	chr19	+	814	4	FSM	ENSG00000090006.18	ENST00000595529.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	15.121728296285	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTCAGGGCATTGATGGG	40606313	False	NA	NA	False	NA	NA	NA	40606465	40608921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40606527_40607364_40607530_40608219_40608370_40608483
transcript_73301.known	chr19	-	2297	16	FSM	ENSG00000123815.13	ENST00000677018.1	2297	16	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_15	54.9405335087149	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715275	True	NA	12	True	AATAAA	-33	NA	40716882	40691513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586_40716704_40716861
transcript_73302.known	chr19	-	2237	15	FSM	ENSG00000123815.13	ENST00000678419.1	2237	15	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_14	48.4473204330524	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40714979	False	1607	12	True	AATAAA	-33	NA	40714990	40691513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40714912
transcript_73304.known	chr19	-	2201	15	FSM	ENSG00000123815.13	ENST00000601967.6	2201	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	46.2085445760493	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715087	False	1607	12	True	AATAAA	-33	NA	40715098	40691513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715056
transcript_73306.known	chr19	-	2443	15	FSM	ENSG00000123815.13	ENST00000324464.8	2443	15	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_14	38.5687829780532	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40715279	True	NA	-4	True	AATAAA	-17	NA	40716886	40691529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_73307.known	chr19	-	2194	15	FSM	ENSG00000123815.13	ENST00000594720.6	2194	15	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_14	42.0031582874723	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715289	True	NA	12	True	AATAAA	-33	NA	40716896	40691513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40705324_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_7331.known	chr1	-	6571	7	FSM	ENSG00000117151.13	ENST00000370630.6	6571	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	7.86694914747063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTCAAGGCTGTCTCAAAAAA	-84573466	True	NA	-21	True	AATAAA	-20	NA	84574440	84549610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84569930_84570140_84570581_84570721_84574238
transcript_73313.known	chr19	-	2041	14	FSM	ENSG00000123815.13	ENST00000243583.10	2041	14	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_9	68.6525425431071	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCAGCTCTTTTCTCTGCG	-40715062	False	1607	-4	True	AATAAA	-17	NA	40715073	40691529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705182_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40715052
transcript_73317.known	chr19	-	2512	14	FSM	ENSG00000123815.13	ENST00000678433.1	2512	14	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	62.0266215035764	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40716789	False	NA	12	True	AATAAA	-33	NA	40716800	40691513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700448_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716586
transcript_73318.known	chr19	-	2335	14	FSM	ENSG00000123815.13	ENST00000679002.1	2335	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_13	43.4765801064375	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGCTAGGGTTGGGGGGAG	-40715287	True	NA	12	True	AATAAA	-33	NA	40716894	40691513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40692374_40692950_40693038_40695988_40696055_40700066_40700175_40700309_40700452_40702599_40702694_40703540_40703623_40703714_40703856_40705095_40705448_40710058_40710137_40714066_40714134_40714277_40714398_40714530_40714636_40716861
transcript_7334.known	chr1	-	1748	6	FSM	ENSG00000117151.13	ENST00000465118.6	1748	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_5	18.7978722200147	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGTAGTGTCTCCCCTTT	-84573456	True	NA	-1	True	AATAAA	-19	NA	84574430	84554537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84573915
transcript_7335.known	chr1	-	2892	6	FSM	ENSG00000117151.13	ENST00000477677.5	2892	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	10.1862652625975	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGATTGTAGAGATGTAT	NA	False	NA	2	True	AATAAA	-23	NA	84574480	84553120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84555200_84563256_84563419_84563734_84563833_84565840_84566013_84570581_84570721_84574238
transcript_7337.known	chr1	-	806	4	FSM	ENSG00000174021.12	ENST00000370645.9	806	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1645.19347055462	18812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTGCATTATTATTGGT	-84506531	False	NA	-11	True	AATAAA	-18	NA	84506581	84498324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84498549_84501825_84501971_84506010_84506302_84506435
transcript_73382.known	chr19	-	553	6	FSM	ENSG00000188493.15	ENST00000598485.6	553	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	68.8284824763702	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGGCTCTGAATGTTCTGT	-40750191	False	NA	-10	True	AATAAA	-13	NA	40750302	40740861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40741009_40743914_40743982_40744558_40744684_40745129_40745199_40749480_40749608_40750284
transcript_73385.known	chr19	-	3302	6	FSM	ENSG00000188493.15	ENST00000378313.7	3302	6	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	31.0251510874645	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40747792	True	NA	-9	True	AATAAA	-14	NA	40750477	40740860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40742771_40743904_40743976_40744066_40744197_40744558_40744684_40745129_40745199_40749480
transcript_73388.known	chr19	-	492	5	FSM	ENSG00000188493.15	ENST00000596940.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	71.5973986957627	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGCTCTGAATGTTCTGTT	-40749442	False	NA	-9	True	AATAAA	-14	NA	40749553	40740860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40741009_40743904_40743982_40744558_40744684_40745129_40745199_40749480
transcript_73396.known	chr19	+	1277	6	FSM	ENSG00000077312.9	ENST00000243563.8	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	1551	junction_5	57.6180527265544	5618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATTTGTCTGTCTGATTTT	40736399	True	NA	37	True	ATTAAA	-30	NA	40751202	40765389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40751482_40757331_40757505_40759430_40759611_40762900_40763075_40763586_40763676_40765007
transcript_73397.known	chr19	+	555	4	FSM	ENSG00000077312.9	ENST00000599362.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	761.775557497088	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCAGGTCCCGGAGAC	40744693	True	NA	NA	False	GGGGCT	-19	NA	40750870	40759610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40750978_40751386_40751482_40757331_40757505_40759430
transcript_73400.known	chr19	+	1173	8	FSM	ENSG00000167578.18	ENST00000594800.5	1173	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_7	97.0444880096815	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACTGACTGTAGCAGATCC	40776064	True	NA	NA	False	AATATA	-18	NA	40778215	40792572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40792216
transcript_73402.known	chr19	+	1159	8	FSM	ENSG00000167578.18	ENST00000357052.8	1159	8	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_2	25.4109087935533	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGGCCTCCATTATTG	40776095	True	NA	8	True	CATAAA	-17	NA	40778246	40796942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40778392_40780018_40780100_40780384_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_73409.nic	chr19	+	1144	7	NIC	ENSG00000167578.18	novel	1159	8	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	19	junction_3	100.14447896248	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGGCCTCCATT	40776043	True	NA	4	True	CATAAA	-13	NA	40778194	40796938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_40778392_40780018_40780100_40780384_40780500_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_7341.known	chr1	+	563	2	FSM	ENSG00000122432.18	ENST00000484939.1	563	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGTTTATATCAGTTCGCA	84506226	True	NA	NA	False	NA	NA	NA	84506299	84507320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84506419_84506876
transcript_73411.nic	chr19	+	1492	7	NIC	ENSG00000167578.18	novel	1159	8	NA	NA	-21	0	intron_retention	FALSE	canonical	3	273	junction_2	13.6503968196288	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTCTTGGCCTCCATT	40776043	True	NA	4	True	CATAAA	-13	NA	40778194	40796938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_40778392_40780018_40780500_40783777_40783841_40783920_40784076_40786664_40786761_40786847_40786979_40796569
transcript_7342.known	chr1	+	383	2	FSM	ENSG00000122432.18	ENST00000468437.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTTAGTATTTCC	84506308	True	NA	9	True	AATAAA	-24	NA	84506381	84507001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84506419_84506655
transcript_73423.known	chr19	+	2150	6	FSM	ENSG00000269858.6	ENST00000406058.6	2150	6	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_1	417.518574437114	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACATCTGACTCCATCTGCA	40799498	False	NA	21	True	AATAAA	-20	NA	40799514	40808432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40799639_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_73427.known	chr19	+	507	5	FSM	ENSG00000261857.7	ENST00000594436.5	507	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGGCTCGTCTCCGTGGTCTT	NA	False	NA	NA	False	AATACA	-17	NA	40775176	40777490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40775212_40775536_40775670_40775751_40775886_40776968_40777080_40777396
transcript_7343.known	chr1	+	1948	9	FSM	ENSG00000117133.11	ENST00000370654.6	1948	9	0	0	0	0	multi-exon	FALSE	canonical	3	305	junction_7	34.4492380176979	1166	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCTGCCAGTGTATATAAA	84472914	True	NA	22	True	AATAAA	-27	NA	84479265	84498352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_84479510_84480955_84481013_84482914_84482996_84489632_84489729_84490318_84490473_84495372_84495456_84495881_84496064_84496243_84496371_84497428
transcript_73435.known	chr19	-	1004	3	FSM	ENSG00000237118.3	ENST00000641827.1	1004	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.5	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGAATGAGAGTCATTTA	NA	False	NA	NA	False	ATTAAA	-1	NA	40826471	40818413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_40818900_40825119_40825262_40826095
transcript_73438.known	chr19	+	2100	6	FSM	ENSG00000269858.6	ENST00000303961.9	2100	6	0	0	0	0	multi-exon	FALSE	canonical	3	900	junction_1	67.1702315017598	792	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTGACTCCATCTGCAAT	40791709	True	NA	23	True	AATAAA	-22	NA	40799190	40808434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40799263_40800338_40801416_40806554_40806675_40807137_40807275_40807483_40807552_40807808
transcript_7344.known	chr1	-	920	3	FSM	ENSG00000174021.12	ENST00000370641.3	920	3	0	0	0	0	multi-exon	FALSE	canonical	3	3458	junction_2	33.5	7083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTATTTTGCATTATTAT	-84506515	False	NA	-15	True	AATAAA	-14	NA	84506565	84498328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84498549_84501825_84501971_84506010
transcript_73440.known	chr19	+	3071	9	FSM	ENSG00000197408.10	ENST00000324071.10	3071	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.2710098864544	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGATCTGTGCCATTTT	NA	False	NA	21	True	AATAAA	-31	NA	40991281	41018398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_40991477_41004000_41004164_41004296_41004447_41006904_41007066_41009218_41009396_41009993_41010136_41012297_41012486_41012673_41012816_41016645
transcript_73445.known	chr19	+	1426	5	FSM	ENSG00000197408.10	ENST00000593831.1	1426	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	33.4776044543214	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAATTCACATAACATAAAAT	41002782	True	NA	NA	False	TTTAAA	-11	NA	41003945	41017373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41004164_41004296_41004447_41012297_41012486_41012673_41012816_41016645
transcript_73449.nic	chr19	+	1271	4	ISM	ENSG00000197838.5	ENST00000330436.4	1760	9	1141	2238	1141	-2238	internal_fragment	TRUE	canonical	2	3	junction_2	1.24721912892465	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACTGATTGGTCAGTCAC	NA	False	NA	NA	False	ATTAAA	-15	NA	41089591	41093957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_41090197_41090403_41090565_41091731_41091909_41093629
transcript_73454.known	chr19	+	306	1	FSM	ENSG00000224476.3	ENST00000496996.1	306	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	41169860	41170166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41169900_41170200
transcript_73455.known	chr19	+	2612	9	FSM	ENSG00000167600.14	ENST00000310054.9	2612	9	0	0	0	0	multi-exon	FALSE	canonical	3	1251	junction_5	81.8725190463809	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178677	True	NA	18	True	ATTAAA	-24	NA	41193218	41207539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708_41198889_41201230_41201373_41203449_41203638_41205957_41206100_41206279
transcript_73462.nic	chr19	+	2096	6	NIC	ENSG00000167600.14	novel	2612	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_3	691.627529816447	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178664	True	NA	18	True	ATTAAA	-24	NA	41193205	41207539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_41193442_41194543_41194710_41197778_41197929_41201230_41201373_41205957_41206100_41206279
transcript_73463.nic	chr19	+	1356	5	ISM	ENSG00000167600.14	ENST00000310054.9	2612	9	-13	8188	-4	-1948	5prime_fragment	FALSE	canonical	3	1328	junction_2	69.9589165153378	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGAACAATATTTCTTT	41178664	True	NA	3	True	AATAAA	-18	NA	41193205	41199351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_41193442_41194543_41194710_41197778_41197929_41198461_41198623_41198708
transcript_73464.nic	chr19	+	1946	5	NIC	ENSG00000167600.14	novel	2612	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	47	junction_2	730.577340190619	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTGTGTGACCCGTGTC	41178664	True	NA	18	True	ATTAAA	-24	NA	41193205	41207539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_41193442_41194543_41194710_41201230_41201373_41205957_41206100_41206279
transcript_73468.known	chr19	+	4717	20	FSM	ENSG00000167601.12	ENST00000301178.9	4717	20	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_9	26.3368336909406	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCTGTCTCCTCTTGTCT	41216336	True	NA	17	True	CATAAA	-18	NA	41219222	41261766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41239693_41239721_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_73469.known	chr19	+	3206	19	FSM	ENSG00000167601.12	ENST00000359092.7	3206	19	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_9	14.8578656892404	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTACTTTTTTTTTTTTTTTT	41216348	True	NA	8	True	ATTAAA	-19	NA	41219234	41260294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41219478_41220635_41220859_41221145_41221247_41221879_41222057_41230966_41231048_41231182_41231299_41237943_41238155_41238469_41238610_41239163_41239315_41242882_41243016_41243615_41243708_41248513_41248610_41248742_41248821_41252350_41252444_41252845_41252968_41253598_41253709_41256451_41256612_41257492_41257630_41259552
transcript_7347.known	chr1	-	5752	14	FSM	ENSG00000117155.17	ENST00000342203.8	5752	14	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_13	26.6815540297747	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTACTGGAATGAATG	-84688352	True	NA	NA	False	AATACA	-17	NA	84690461	84643705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84671176_84671309_84690370
transcript_73473.known	chr19	+	3426	15	FSM	ENSG00000105323.18	ENST00000352456.7	3426	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_13	293.530932208627	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAGAAATGTGTTTGCCCTG	41253471	True	NA	17	True	NA	NA	NA	41262495	41307598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305645_41305868_41306448
transcript_73474.known	chr19	+	2794	15	FSM	ENSG00000105323.18	ENST00000595018.5	2794	15	0	0	0	0	multi-exon	FALSE	canonical	3	363	junction_1	211.008620096673	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAATCAAAACTTA	41253494	True	NA	18	True	NA	NA	NA	41262518	41307019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41262583_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_73478.known	chr19	+	3043	15	FSM	ENSG00000105323.18	ENST00000595196.5	3043	15	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	268.991161375163	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTTTAAAAAGCAAAATGGGG	41251410	True	NA	49	True	ATTAAA	-29	NA	41264410	41307050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41264693_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_73490.known	chr19	+	3329	5	FSM	ENSG00000142039.4	ENST00000269967.4	3329	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_4	18.5792222657462	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGCTATACGTAAATTTG	41306963	True	NA	14	True	ATTAAA	-16	NA	41310171	41324873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41310357_41316383_41316840_41319573_41319853_41320340_41320471_41322594
transcript_73496.known	chr19	-	826	5	FSM	ENSG00000077348.10	ENST00000596905.1	826	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	252.881889426665	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTATGGAATGGATGAAT	-41393782	True	NA	-57	True	NA	NA	NA	41397342	41386414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41397180
transcript_73499.known	chr19	+	650	4	FSM	ENSG00000142046.15	ENST00000413014.6	650	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.657891697365	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41363715	False	NA	8	True	ATTAAA	-24	NA	41364055	41384083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41364096_41378280_41378520_41382771_41382922_41383862
transcript_735.known	chr1	-	1187	3	FSM	ENSG00000237613.2	ENST00000417324.1	1187	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGTTGCTGGAATGCTTG	NA	False	NA	NA	False	ATTAAA	-15	NA	36081	34553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_35175_35276_35482_35720
transcript_7350.known	chr1	-	1933	13	FSM	ENSG00000117155.17	ENST00000605755.5	1933	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	47.3675785743793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACAGGGTGTGTCATAAAG	-84688335	True	NA	-43	True	NA	NA	NA	84690444	84647375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_84647608_84650361_84650528_84651882_84651998_84655831_84656006_84656347_84656485_84658317_84658469_84662197_84662376_84662454_84662531_84664416_84664553_84666121_84666233_84669680_84669894_84670645_84670816_84690370
transcript_73502.known	chr19	+	1080	4	FSM	ENSG00000142046.15	ENST00000392002.7	1080	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	14.6590889515307	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376492	True	NA	8	True	ATTAAA	-24	NA	41376532	41384083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383714
transcript_73503.known	chr19	+	725	4	FSM	ENSG00000142046.15	ENST00000544232.5	725	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	9.17726659862414	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376515	True	NA	8	True	ATTAAA	-24	NA	41376739	41384083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383862
transcript_73504.known	chr19	+	864	4	FSM	ENSG00000142046.15	ENST00000436170.6	864	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	13.2748718344933	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGAGTCTGTTCGCGTGTG	41376537	False	NA	8	True	ATTAAA	-24	NA	41376577	41384083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771_41382922_41383885
transcript_73505.known	chr19	-	982	4	FSM	ENSG00000123810.9	ENST00000675972.1	982	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.3726850393609	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-41363635	False	NA	-1	True	AGTAAA	-20	NA	41363930	41354416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363763
transcript_73506.known	chr19	-	1007	4	FSM	ENSG00000123810.9	ENST00000243578.8	1007	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	4.96655480858378	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTGCCTCCTGACCCTTC	-41363854	True	NA	-1	True	AGTAAA	-20	NA	41364149	41354416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41355014_41357896_41358023_41363431_41363524_41363957
transcript_7351.nic	chr1	-	697	2	ISM	ENSG00000153898.13	ENST00000531874.1	577	3	7	6100	6	-6100	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATTGTGTTGTCTCTCT	-84996755	True	NA	NA	False	AATAAA	-18	NA	84997106	84971648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_84972035_84996795
transcript_73515.known	chr19	-	421	3	FSM	ENSG00000123810.9	ENST00000601597.1	421	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	20	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGAGCCTGTTTCTT	-41363797	True	NA	-3	True	AATAAA	-16	NA	41364092	41361009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41361204_41363431_41363524_41363957
transcript_73519.known	chr19	+	3925	15	FSM	ENSG00000105323.18	ENST00000392006.8	3925	15	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	174.475072776624	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGTGCCTGGCCCCGAT	41251371	True	NA	7	True	ATTAAA	-17	NA	41264371	41307787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41264799_41268222_41268346_41272081_41272236_41273981_41274056_41276158_41276299_41279076_41279177_41281162_41281276_41292244_41292512_41294337_41294461_41294557_41294687_41301535_41301705_41302664_41302950_41303971_41304262_41305675_41305868_41306448
transcript_73520.known	chr19	-	998	6	FSM	ENSG00000077348.10	ENST00000221233.9	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_2	27.1705723163867	17241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAATGTCTGTTGAGCACCC	-41393799	True	NA	-16	True	AATAAA	-15	NA	41397359	41386373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41386726_41387513_41387604_41389764_41389906_41391840_41391963_41392866_41392981_41397180
transcript_73521.known	chr19	-	716	3	FSM	ENSG00000077348.10	ENST00000593523.2	2272	3	6	1550	0	-1550	multi-exon	FALSE	canonical	3	598	junction_1	34	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTTCGCATGTTTCAGG	-41393796	True	NA	NA	False	NA	NA	NA	41397356	41391536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41391963_41392866_41392981_41397180
transcript_73522.known	chr19	+	1742	9	FSM	ENSG00000248098.12	ENST00000269980.7	1742	9	0	0	0	0	multi-exon	TRUE	canonical	3	426	junction_5	30.0166620396073	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	41393453	True	NA	32	True	AATAAA	-26	NA	41397817	41425002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41397936_41410636_41410817_41410922_41411010_41414048_41414158_41419134_41419297_41422163_41422371_41422628_41422771_41422997_41423170_41424437
transcript_73523.known	chr19	+	562	2	FSM	ENSG00000248098.12	ENST00000544905.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCACCTCTGGTCTTTGTTTC	41423097	False	NA	32	True	AATAAA	-26	NA	41423108	41425002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41423170_41424501
transcript_73524.known	chr19	+	1610	3	FSM	ENSG00000142046.15	ENST00000542945.5	1610	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCAGACACCCTTGCAGCC	41376548	True	NA	-15	True	ATTAAA	-1	NA	41376772	41384060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41376855_41378280_41378520_41382771
transcript_73525.known	chr19	-	463	2	FSM	ENSG00000177191.3	ENST00000601379.1	463	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTGCGAGCTCAGGACGA	-41427211	True	NA	NA	False	NA	NA	NA	41427362	41426055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41426440_41427283
transcript_73526.known	chr19	-	1874	3	FSM	ENSG00000177191.3	ENST00000321702.2	1874	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGGTTGTTTTTGCA	-41428711	False	NA	-1	True	AAAACA	-18	NA	41428730	41425358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41426811_41427283_41427571_41428595
transcript_73528.known	chr19	-	1065	6	FSM	ENSG00000105341.19	ENST00000417807.7	1065	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	153.108327663782	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGGCTCAGGCTGTTAGTA	-41434780	False	4759	NA	False	NA	NA	NA	41439539	41431987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_7353.known	chr1	-	2810	13	FSM	ENSG00000055732.13	ENST00000370589.7	2810	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	5.40254569624358	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTGATGAAGTAATTATT	-85048124	True	NA	1	True	ATTAAA	-17	NA	85048500	85018081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85019258_85021069_85021277_85022069_85022193_85022298_85022401_85025938_85026089_85026171_85026285_85029105_85029206_85032695_85032793_85032871_85032957_85034097_85034252_85041009_85041178_85045132_85045363_85048395
transcript_73531.known	chr19	-	1134	5	FSM	ENSG00000105341.19	ENST00000301183.15	1134	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	193.115250562973	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCCCATAGTATTGCTGG	-41434780	False	4759	NA	False	ACTAAA	-15	NA	41439539	41431755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433536_41433674_41436391_41436473_41438217_41438415_41439473
transcript_73537.known	chr19	-	1026	4	FSM	ENSG00000105341.19	ENST00000590641.6	1026	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	180.474067081365	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGAAATTTGGGGCCAGT	-41434817	False	NA	NA	False	NA	NA	NA	41439576	41432845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41433435_41433536_41433674_41438217_41438415_41439473
transcript_73540.known	chr19	-	1700	6	FSM	ENSG00000105341.19	ENST00000221943.14	1700	6	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	21.4046723871215	3472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435153	True	NA	-2	True	ATTAAA	-19	NA	41439912	41431317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41436391_41436473_41438217_41438415_41439881
transcript_73541.known	chr19	-	1622	5	FSM	ENSG00000105341.19	ENST00000592922.6	1622	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_3	144.722795371013	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACTTTCCCTGTTCAAGTT	-41435177	True	NA	-23	True	NA	NA	NA	41439936	41431338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433271_41433435_41433536_41433674_41438217_41438415_41439881
transcript_73542.known	chr19	-	1454	4	FSM	ENSG00000105341.19	ENST00000438807.7	1454	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	154.169459434164	2219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTGGTTTTTCTCTCCT	-41435151	True	NA	-2	True	ATTAAA	-19	NA	41439910	41431317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41432409_41433536_41433674_41438217_41438415_41439881
transcript_73543.nic	chr19	-	794	2	ISM	ENSG00000267107.9	ENST00000651572.3	1380	5	-273	46462	-273	-6718	5prime_fragment	FALSE	canonical	2	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGAGGTCTCATGTCTGCTT	NA	False	NA	1	True	AATAAA	-17	NA	41501528	41500630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_41500788_41500891
transcript_73550.known	chr19	+	467	3	FSM	ENSG00000270164.2	ENST00000483481.2	467	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTGATTTGATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	41535497	41536904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41535602_41535727_41535784_41536597
transcript_73552.nic	chr19	+	435	3	FSM	ENSG00000270164.2	ENST00000685659.1	411	3	-24	0	-24	0	multi-exon	FALSE	canonical	1	2	junction_2	0.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCACGTGTGATTTGATTT	NA	False	NA	NA	False	AATAAA	-21	NA	41535541	41536902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41535602_41535713_41535784_41536597
transcript_73553.known	chr19	+	409	3	FSM	ENSG00000270164.2	ENST00000494375.2	409	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGTGTGATTTGATTTTT	41535504	True	NA	NA	False	AATAAA	-23	NA	41535566	41536904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41535602_41535713_41535784_41536600
transcript_73554.known	chr19	+	601	2	FSM	ENSG00000268027.5	ENST00000601116.5	601	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTAATAGTGTGCCCAGAT	NA	False	NA	NA	False	NA	NA	NA	41549519	41550705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41549553_41550137
transcript_73574.known	chr19	+	668	6	FSM	ENSG00000105372.8	ENST00000600467.6	668	6	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	16889.7345201161	115688	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41589541	True	NA	34	True	AATAAA	-16	NA	41860254	41871416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860446_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_73575.known	chr19	+	526	6	FSM	ENSG00000105372.8	ENST00000593863.5	526	6	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	17018.4313072621	115950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41859939	True	NA	34	True	AATAAA	-16	NA	41860445	41871416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860495_41860774_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_73592.known	chr19	+	500	6	FSM	ENSG00000105372.8	ENST00000221975.6	500	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17055.9203750487	268932	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGGTCTGGGTCTCTTTT	41589543	True	NA	34	True	AATAAA	-16	NA	41860256	41871416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860290_41860784_41860846_41861111_41861213_41869030_41869215_41869698_41869754_41871350
transcript_73593.known	chr19	+	313	4	FSM	ENSG00000105372.8	ENST00000598261.2	313	4	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_3	17596.528994852	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGAGTGTGGCCCGCCGGGT	41589564	True	NA	NA	False	NA	NA	NA	41860277	41869146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41860290_41860774_41860846_41861111_41861226_41869030
transcript_73594.known	chr19	+	567	5	FSM	ENSG00000105369.10	ENST00000444740.2	567	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4790199457749	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCCCTACTCCTGCCAGGC	41877293	False	NA	NA	False	NA	NA	NA	41877304	41880980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41877384_41878989_41879176_41879534_41879654_41880669_41880739_41880866
transcript_73595.known	chr19	+	1099	5	FSM	ENSG00000105369.10	ENST00000221972.8	1099	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1.22474487139159	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTGGCAGGAGTCGTGG	41877267	False	NA	5	True	AATAAA	-16	NA	41877278	41881372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41877384_41878989_41879290_41879534_41879654_41880669_41880739_41880866
transcript_73596.known	chr19	+	3229	29	FSM	ENSG00000076928.18	ENST00000354532.8	3229	29	0	0	0	0	multi-exon	TRUE	canonical	3	142	junction_1	41.6730930418354	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCTGTGTGTGTGATGGCG	41880480	True	NA	22	True	AATATA	-16	NA	41883183	41907452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_73597.known	chr19	+	3171	29	FSM	ENSG00000076928.18	ENST00000337665.8	3171	29	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_1	43.6197039355905	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41882935	True	NA	24	True	AATATA	-18	NA	41884447	41907454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41884494_41888063_41888107_41888191_41888279_41888751_41888866_41892024_41892124_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_73602.known	chr19	+	3091	28	FSM	ENSG00000076928.18	ENST00000347545.8	3091	28	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	57.5003548626254	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGATGGCGGG	41880521	True	NA	24	True	AATATA	-18	NA	41883224	41907454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_41883290_41888063_41888107_41888191_41888279_41888751_41888866_41892330_41892374_41892602_41892850_41893273_41893304_41894206_41894307_41894450_41894548_41894625_41894662_41895348_41895487_41896376_41896483_41898441_41898588_41901886_41902034_41902273_41902357_41902532_41902659_41902783_41902899_41903306_41903408_41903706_41903785_41904034_41904111_41904215_41904384_41904948_41905037_41905174_41905262_41905759_41905828_41905938_41906026_41906456_41906621_41906702_41906804_41907104
transcript_73603.known	chr19	-	3551	23	FSM	ENSG00000105409.19	ENST00000648268.1	3551	23	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_17	17.0452121194882	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGTGTGTGTTGTGCCT	-41990623	True	NA	-4	True	AATATA	-18	NA	41994230	41966581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41966966_41967248_41967341_41967661_41967764_41968784_41968916_41969434_41969581_41970184_41970309_41970387_41970543_41975628_41975798_41976415_41976567_41977935_41978073_41978150_41978327_41978605_41978799_41981501_41981637_41981721_41981832_41981907_41982107_41984917_41985187_41985305_41985424_41985863_41985999_41986115_41986230_41987935_41988140_41988317_41988378_41988475_41988563_41994070
transcript_73613.known	chr19	-	728	5	FSM	ENSG00000105404.11	ENST00000601078.5	728	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_4	696.189090693039	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGGCTCTGCTGCTCGGGCC	-41949195	True	NA	-107	True	NA	NA	NA	41959275	41956780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959114
transcript_73615.known	chr19	-	750	5	FSM	ENSG00000105404.11	ENST00000222008.11	750	5	0	0	0	0	multi-exon	FALSE	canonical	3	1455	junction_2	155.803361645377	11161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCCCCCAGCATCTTCTG	-41949241	True	NA	-9	True	AATAAA	-26	NA	41959321	41956682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_73616.known	chr19	-	628	4	FSM	ENSG00000105404.11	ENST00000601891.5	628	4	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	813.533991641133	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	-41949219	True	NA	-7	True	AATAAA	-28	NA	41959299	41956680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41958285_41958384_41958735_41958949_41959236
transcript_73617.known	chr19	-	653	5	FSM	ENSG00000105404.11	ENST00000600292.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_1	682.05255479325	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCCAGCATCTTCTGTG	-41949186	True	NA	-7	True	AATAAA	-28	NA	41959266	41956680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956891_41957017_41957120_41958285_41958384_41958735_41958949_41959236
transcript_73618.known	chr19	-	530	3	FSM	ENSG00000105404.11	ENST00000601028.1	530	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	728.5	550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATTCCCCCAGCATCTT	-41948834	False	NA	-12	True	AATAAA	-23	NA	41958914	41956685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_41956935_41957017_41957120_41958735
transcript_7362.known	chr1	-	3391	4	FSM	ENSG00000162642.14	ENST00000294661.8	3391	4	0	0	0	0	multi-exon	FALSE	canonical	3	304	junction_2	80.7066016850887	591	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250206	True	NA	-3	True	ATTAAA	-16	NA	85259672	85249952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85252703_85258523_85258723_85258934_85259062_85259357
transcript_73622.known	chr19	+	3087	2	FSM	ENSG00000105732.13	ENST00000359044.5	3087	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	42	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTAGAGTGGAATTTGG	42069556	True	NA	20	True	AATAAA	-17	NA	42076165	42081552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42076287_42078586
transcript_73628.known	chr19	+	759	3	FSM	ENSG00000254887.1	ENST00000527895.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCATTGCTAAGCTCAGAGA	NA	False	NA	NA	False	AATAAA	-28	NA	42132554	42137099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42132762_42132904_42133029_42136671
transcript_73629.known	chr19	-	3524	10	FSM	ENSG00000105723.13	ENST00000398249.8	3524	10	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	32.9391507832395	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	-42241876	False	NA	-5	True	AATAAA	-16	NA	42241893	42230189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42230868_42232056_42232150_42232495_42232683_42233109_42233206_42233285_42233384_42234352_42234460_42234547_42234679_42236605_42236717_42236857_42236942_42239954
transcript_73630.nic	chr19	-	1597	4	NIC	ENSG00000160570.14	novel	1894	5	NA	NA	-37	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	111.505854355525	199	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	NA	False	NA	-8	True	ATTAAA	-28	NA	42220177	42198597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_42199830_42209699_42209841_42215132_42215253_42220073
transcript_73631.nnic	chr19	-	902	4	NNC	ENSG00000105723.13	novel	2193	11	NA	NA	-7	0	intron_retention	FALSE	non_canonical	0	0	junction_3	175.455597421874	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCTTTCTGTCCGGCTGC	-42238600	True	NA	-5	True	AATAAA	-16	NA	42242609	42230189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_42230868_42232056_42232150_42232495_42232545_42242527
transcript_73632.known	chr19	+	3982	3	FSM	ENSG00000167625.11	ENST00000301215.8	3982	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	7.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAGGAAAA	42218358	True	NA	NA	False	NA	NA	NA	42220311	42228201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42220388_42224214_42224306_42224386
transcript_73634.nnic	chr19	-	1492	3	NIC	ENSG00000160570.14	novel	1905	5	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_2	118	194	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCCTCTCTAGGACTCTT	-42214938	True	NA	-8	True	ATTAAA	-28	NA	42217750	42198597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_42199830_42209699_42209841_42217631
transcript_73636.known	chr19	-	555	4	FSM	ENSG00000105722.10	ENST00000593944.5	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	30.2140511829991	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGGCTGTGGTGGCCCGCCG	-42253885	False	4296	NA	False	NA	NA	NA	42253899	42249592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42249739_42249826_42249943_42250330_42250566_42253841
transcript_73637.known	chr19	+	8299	21	FSM	ENSG00000079432.9	ENST00000681038.1	8299	21	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	24.929099462275	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTGGCTGTAGGCTCT	42268831	True	NA	19	True	ATTAAA	-14	NA	42269251	42295796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42269382_42271773_42274578_42286770_42286921_42287005_42287241_42287319_42287450_42287544_42287728_42287809_42287976_42288887_42289091_42289180_42289407_42289847_42289952_42290232_42291467_42291557_42291746_42292085_42292208_42292299_42292467_42292565_42292860_42292955_42293282_42293591_42293837_42293934_42294090_42294172_42294305_42294603_42294736_42294823
transcript_73646.known	chr19	+	1523	3	FSM	ENSG00000188368.11	ENST00000341747.8	1523	3	0	0	0	0	multi-exon	TRUE	canonical	3	20	junction_2	4	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGATTTTCAGTGAGTT	42301886	True	NA	3	True	AATAAA	-16	NA	42302131	42310814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42302504_42309578_42310186_42310270
transcript_73647.known	chr19	+	1271	3	FSM	ENSG00000188368.11	ENST00000595750.2	1271	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	42306861	False	NA	2	True	AATAAA	-15	NA	42306952	42310813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42307074_42309578_42310186_42310270
transcript_73649.known	chr19	+	1641	2	FSM	ENSG00000188368.11	ENST00000598490.1	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTGATTTTCAGTGAGT	42302074	True	NA	2	True	AATAAA	-15	NA	42302097	42310813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42302504_42309578
transcript_73650.known	chr19	-	1098	6	FSM	ENSG00000079462.8	ENST00000538771.5	1098	6	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_5	218.972692361399	4108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTCCTGCTTTATGG	-42302276	False	NA	-22	True	ATTAAA	-17	NA	42302777	42297032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231_42302326_42302436
transcript_73651.known	chr19	-	1054	5	FSM	ENSG00000079462.8	ENST00000262890.8	1054	5	0	0	0	0	multi-exon	FALSE	canonical	3	931	junction_1	45.2493093869951	3490	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTGTTTCCTGCTTTAT	-42302123	False	798	-24	True	ATTAAA	-15	NA	42302624	42297034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42299969_42300093_42300170_42300288_42301949_42302040_42302231
transcript_73652.known	chr19	-	649	5	FSM	ENSG00000079462.8	ENST00000594989.5	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	407.096042108002	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCTGTTTCCTGCTTTA	-42301791	False	NA	-25	True	ATTAAA	-14	NA	42302292	42297035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42297366_42300041_42300093_42300170_42300288_42301949_42302040_42302231
transcript_73653.known	chr19	+	1797	15	FSM	ENSG00000167619.13	ENST00000301204.8	1797	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.90938293641131	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTCTTTTGCATCTT	42312981	True	NA	21	True	AATAAA	-24	NA	42313308	42325064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42313497_42314271_42314347_42314450_42314529_42314612_42314700_42314791_42314852_42314992_42315078_42315187_42315260_42315371_42315441_42316480_42316562_42316661_42316741_42316869_42316964_42317708_42317882_42320316_42320438_42323582_42323790_42324736
transcript_73655.known	chr19	-	533	4	FSM	ENSG00000105427.10	ENST00000222032.10	533	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	126.336411571996	1213	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCGCCTACATCCATTTTG	-42390227	False	NA	0	True	AATAAA	-15	NA	42390297	42387018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42387243_42387339_42387477_42388925_42389040_42390239
transcript_73661.nnic	chr19	+	564	4	NIC	ENSG00000213904.10	novel	911	4	NA	NA	-11	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTGGTCTGTGAATTAA	42396705	True	NA	NA	False	TATAAA	-21	NA	42397147	42525869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_42397225_42485095_42485224_42521991_42522099_42525617
transcript_73665.nnic	chr19	+	560	3	NNC	ENSG00000213904.10	novel	1448	3	NA	NA	-11	11604	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAAGTGGGAGAATGTCAT	42396705	True	NA	NA	False	AATAAA	-27	NA	42397147	42497198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_42397225_42485095_42485224_42496843
transcript_73667.known	chr19	+	1448	3	FSM	ENSG00000213904.10	ENST00000594624.6	1448	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCTGCCGTCCACATTTC	42396731	True	NA	5	True	AATAAA	-18	NA	42397173	42652355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42397225_42485095_42485224_42651086
transcript_73669.nnic	chr19	+	407	3	NNC	ENSG00000213904.10	novel	444	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGGGCATAGCTC	42396707	True	NA	6	True	AGTAAA	-18	NA	42397149	42408443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_42397225_42400567_42400714_42408257
transcript_73671.nnic	chr19	+	452	3	FSM	ENSG00000213904.10	ENST00000685146.1	444	3	-8	0	-8	0	multi-exon	FALSE	canonical	0	0	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTGCTGGGCATAGCTC	42396708	True	NA	6	True	AGTAAA	-18	NA	42397150	42408443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42397225_42401168_42401361_42408257
transcript_73674.known	chr19	+	292	2	FSM	ENSG00000213904.10	ENST00000593491.3	306	2	14	0	14	0	multi-exon	FALSE	canonical	3	10	junction_1	0	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCATAGCTCTCGGCTGGT	42396685	True	NA	15	True	AGTAAA	-27	NA	42397127	42408452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42397225_42408257
transcript_73675.known	chr19	+	251	2	FSM	ENSG00000213904.10	ENST00000599276.1	251	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTGTGTGCTGGGCATAGCT	42401139	False	NA	5	True	AGTAAA	-17	NA	42401581	42408442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_42401648_42408257
transcript_73676.nnic	chr19	+	445	2	NNC	ENSG00000213904.10	novel	306	2	NA	NA	172	-2	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACTGTGTGCTGGGCATAG	42401695	True	NA	3	True	AGTAAA	-15	NA	42401753	42408440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_42402016_42408257
transcript_73677.known	chr19	-	1080	4	FSM	ENSG00000189377.9	ENST00000601181.6	1080	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGCACAGTTTCTTAGCA	NA	False	NA	NA	False	ATTAAA	-25	NA	42442946	42428277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42428982_42432975_42433078_42433775_42433857_42442753
transcript_73678.known	chr19	-	1873	7	FSM	ENSG00000221826.10	ENST00000327495.10	1873	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.763762615825973	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGGATCTGCTCTCTTTA	NA	False	NA	NA	False	AATAAA	-19	NA	42740481	42721641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_42722091_42723941_42724026_42729122_42729378_42729777_42730057_42732783_42733063_42738723_42739090_42740320
transcript_73680.known	chr19	-	301	2	FSM	ENSG00000231412.3	ENST00000595748.2	721	2	114	306	114	-306	multi-exon	TRUE	canonical	3	20	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGAAGTGAAAAGGCCCTG	-43331292	False	NA	NA	False	NA	NA	NA	43331430	43329294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43329509_43331343
transcript_73681.known	chr19	+	2195	9	FSM	ENSG00000204936.10	ENST00000618265.5	2195	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3.56852560590505	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACCGTTCTATACGCAATT	43353537	True	NA	7	True	CATAAA	-24	NA	43353685	43363172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43353767_43353852_43353994_43354206_43354393_43355660_43355784_43355991_43356109_43360264_43360406_43361142_43361329_43361444_43361580_43362087
transcript_73685.nnic	chr19	-	1241	4	Antisense	novelGene_ENSG00000131126.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	2.35702260395516	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTCTGAAGTTTTTCCTT	-43421018	True	NA	NA	False	ATTAAA	-16	NA	43421047	43409056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_43409769_43414725_43414991_43417612_43417736_43420906
transcript_73688.known	chr19	-	1642	5	FSM	ENSG00000124466.9	ENST00000244333.4	1642	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	7.15454401062709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-43465595	False	NA	-11	True	AATAAA	-23	NA	43465608	43460786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43461848_43463125_43463288_43463598_43463770_43464324_43464457_43465492
transcript_73689.known	chr19	-	574	3	FSM	ENSG00000124466.9	ENST00000594326.1	574	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGCACTCGGGATGGAGT	-43463950	False	NA	NA	False	GGGGCT	-15	NA	43463963	43461800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43461848_43463125_43463288_43463598
transcript_7369.known	chr1	-	3254	3	FSM	ENSG00000162642.14	ENST00000471115.6	3254	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_2	123.5	879	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCAGTCTCTGGTATGT	-85250196	True	NA	-3	True	ATTAAA	-16	NA	85259662	85249952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85252703_85258523_85258723_85259357
transcript_73690.nic	chr19	-	1306	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	593	-1014	593	0	3prime_fragment	FALSE	canonical	3	21	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAAAGGAGTCACTTCCA	-43463091	True	NA	-11	True	AATAAA	-23	NA	43463370	43460786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_43461848_43463125
transcript_73691.nic	chr19	-	930	2	ISM	ENSG00000124466.9	ENST00000594326.1	574	3	593	-638	593	280	3prime_fragment	FALSE	canonical	3	21	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCAGGGGTGTTCTAGCTT	-43463091	True	NA	NA	False	AATAAA	-19	NA	43463370	43461162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_43461848_43463125
transcript_73696.nic	chr19	-	1136	7	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	37.6282990432585	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525764	True	NA	0	True	AATAAA	-17	NA	43527257	43506718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43526936
transcript_73701.nnic	chr19	-	681	5	NIC	ENSG00000105755.8	novel	920	7	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	8	junction_4	45.8911756223351	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525763	True	NA	0	True	AATAAA	-17	NA	43527256	43506718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43527096
transcript_73704.known	chr19	-	920	7	FSM	ENSG00000105755.8	ENST00000292147.7	920	7	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_4	12.9957257930786	993	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGACTTCTACCTATTTT	-43525708	True	NA	0	True	AATAAA	-17	NA	43527201	43506718	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526200_43526350_43526514_43526660_43527096
transcript_73705.known	chr19	-	702	6	FSM	ENSG00000105755.8	ENST00000594342.5	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	36.9345366831642	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATGACACTGCACCTCT	-43525712	True	NA	-73	True	NA	NA	NA	43527205	43506791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43506903_43507943_43508061_43508774_43508865_43511436_43511567_43526514_43526660_43527096
transcript_73706.known	chr19	-	2052	17	FSM	ENSG00000073050.12	ENST00000262887.10	2052	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_15	26.8511522099146	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCAAGAGTCTCCCAAAACT	-43573051	True	NA	-18	True	AATAAA	-17	NA	43575527	43543310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43575407
transcript_73708.known	chr19	-	1994	16	FSM	ENSG00000073050.12	ENST00000543982.5	1994	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_15	51.6919937922907	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCCAAGAGTCTCCCAAAAC	-43573087	True	NA	-19	True	AATAAA	-16	NA	43575563	43543311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43543506_43543611_43543688_43544143_43544235_43545817_43545958_43546051_43546107_43546594_43546728_43546883_43546978_43551570_43551688_43552016_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43575407
transcript_73715.known	chr19	-	913	9	FSM	ENSG00000073050.12	ENST00000598165.5	913	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	53.9044293170793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCCCTGCCCGAGCACA	-43580152	True	NA	NA	False	NA	NA	NA	43580473	43552243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43552276_43552796_43552909_43552981_43553092_43553400_43553513_43553608_43553684_43554645_43554805_43560909_43561021_43574909_43575003_43580364
transcript_73720.known	chr19	+	569	4	FSM	ENSG00000234465.11	ENST00000562255.5	569	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	40.077702307171	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580059	True	NA	13	True	TATAAA	-17	NA	43580543	43582098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43580588_43581211_43581365_43581562_43581704_43581867
transcript_73723.known	chr19	+	557	4	FSM	ENSG00000234465.11	ENST00000569031.6	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	38.19249489974	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGAGTCCTTGTGGTGTG	43580153	True	NA	13	True	TATAAA	-17	NA	43580637	43582098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43580670_43581211_43581365_43581562_43581704_43581867
transcript_73724.nnic	chr19	+	871	4	NNC	ENSG00000234465.11	novel	557	4	NA	NA	27	3557	at_least_one_novel_splicesite	FALSE	canonical	2	22	junction_1	35.7801931551832	40	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTACCATGGTAATTGAGAT	43580086	True	NA	NA	False	AATAAA	-23	NA	43580570	43587521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43580670_43581211_43581365_43581562_43581704_43587043
transcript_73727.nnic	chr19	-	476	2	NNC	ENSG00000073050.12	novel	913	9	NA	NA	-24	-1345	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	0	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGCTTTCTCGGCTTCA	-43580176	True	NA	NA	False	AATAAA	-23	NA	43580497	43575873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_43576217_43580364
transcript_73728.known	chr19	+	706	3	FSM	ENSG00000234465.11	ENST00000562365.2	706	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	1	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCTTGTGGTGTGATGTAT	43581026	False	NA	19	True	TATAAA	-23	NA	43581036	43582104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43581365_43581562_43581704_43581867
transcript_7373.nic	chr1	+	774	2	ISM	ENSG00000223653.6	ENST00000654182.1	2673	3	-106	69833	-106	-69833	5prime_fragment	FALSE	canonical	2	3	junction_1	0	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AACACACACAAAAAAACAAT	85276244	True	NA	NA	False	AAGAAA	-23	NA	85276281	85277898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_85276798_85277640
transcript_73731.known	chr19	+	867	3	FSM	ENSG00000124444.16	ENST00000533118.5	867	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	69	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAATGGGAAGGGAGTG	43596467	False	NA	93	True	NA	NA	NA	43596479	43599494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43596586_43597096_43597194_43598830
transcript_73733.known	chr19	+	859	3	FSM	ENSG00000124444.16	ENST00000528387.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	68.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTGTCTCCCTTATT	43596562	False	NA	NA	False	NA	NA	NA	43596574	43599525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43596639_43597093_43597194_43598830
transcript_73735.known	chr19	+	830	3	FSM	ENSG00000124444.16	ENST00000529930.1	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	61	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTAGAGCTTCAGTCTTTGG	43594788	True	NA	13	True	AATAAA	-21	NA	43596594	43599414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43596744_43597096_43597194_43598830
transcript_73739.known	chr19	-	1162	3	FSM	ENSG00000131116.12	ENST00000300811.8	1162	3	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	16	298	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAATGGTGCTGGGTGAGT	-43617629	True	NA	-1	True	AATAGA	-18	NA	43619629	43607223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43608108_43614228_43614435_43619557
transcript_7374.nic	chr1	+	1069	2	ISM	ENSG00000223653.6	ENST00000654182.1	2673	3	-106	69538	-106	-69538	5prime_fragment	FALSE	canonical	2	3	junction_1	0	35	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATATTCTAGTTTATTTG	85276244	True	NA	NA	False	AATAAA	-20	NA	85276281	85278193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_85276798_85277640
transcript_73740.known	chr19	-	1254	7	FSM	ENSG00000011422.12	ENST00000339082.7	1254	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	21.9443741208437	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGTGGGGCATGCCTGTG	-43670151	False	NA	NA	False	AATAAA	-16	NA	43670166	43646094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43646549_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_73744.nic	chr19	-	1809	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_6	20.6700266085944	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	-43667738	True	NA	-16	True	CATAAA	-17	NA	43668322	43648579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43667776
transcript_73746.nnic	chr19	-	1379	7	NNC	ENSG00000011422.12	novel	1368	7	NA	NA	17	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	24.2103054274185	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	-43667703	True	NA	-16	True	CATAAA	-17	NA	43668287	43648579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668171
transcript_73747.nic	chr19	-	1351	7	NIC	ENSG00000011422.12	novel	1368	7	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	23.8537208837531	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	-43668349	False	NA	-16	True	CATAAA	-17	NA	43668364	43648579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43668276
transcript_73748.known	chr19	-	1368	7	FSM	ENSG00000011422.12	ENST00000340093.8	1368	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_6	14.5344418537486	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-43670154	False	NA	-15	True	CATAAA	-18	NA	43670169	43648578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43649144_43652224_43652372_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_73751.known	chr19	-	1205	6	FSM	ENSG00000011422.12	ENST00000601723.5	1205	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.6390327430658	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGGCCAGGTATGCCCTTC	-43670138	False	NA	-15	True	CATAAA	-18	NA	43670153	43648578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43649144_43655438_43655574_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_73753.known	chr19	-	1610	6	FSM	ENSG00000011422.12	ENST00000221264.8	1610	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	22.5707775674654	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGGCCAGGTATGCCCTT	NA	False	NA	-16	True	CATAAA	-17	NA	43670547	43648579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43649144_43652224_43652372_43656478_43656641_43665315_43665460_43667580_43667692_43670065
transcript_73754.known	chr19	-	5491	14	FSM	ENSG00000105771.14	ENST00000270066.11	5491	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_7	14.7515920312223	74	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAGCGATTGGTCTCTAT	-43753551	True	NA	NA	False	AATAAA	-29	NA	43754962	43727982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43731675_43732857_43733003_43733323_43733453_43733625_43733734_43734388_43734496_43737596_43737683_43738121_43738218_43740106_43740219_43744771_43744885_43747441_43747540_43747632_43747898_43747977_43748053_43750591_43750748_43754653
transcript_73757.known	chr19	-	1270	7	FSM	ENSG00000104783.15	ENST00000648053.1	1270	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.97202659436654	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAAGTTGCCATTTCTCT	NA	False	NA	-9	True	AATAAA	-9	NA	43773900	43766538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43767090_43767539_43767708_43768962_43769033_43769441_43769561_43769718_43769830_43771999_43772136_43773785
transcript_73758.known	chr19	-	1956	9	FSM	ENSG00000104783.15	ENST00000648319.1	1956	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	1.93245310421754	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGCCATTTCTCTCTAAAC	NA	False	NA	-3	True	AATAAA	-15	NA	43780973	43766532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43767090_43767539_43767708_43768962_43769033_43769441_43769561_43769718_43769830_43771999_43772136_43774191_43774620_43776540_43776637_43780702
transcript_73759.known	chr19	-	1519	4	FSM	ENSG00000159871.15	ENST00000594013.5	1519	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCTGCAGAGACTGTGGG	NA	False	NA	NA	False	NA	NA	NA	43800029	43796958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43797830_43798454_43798602_43798811_43798989_43799705
transcript_73760.known	chr19	-	576	2	FSM	ENSG00000159871.15	ENST00000595666.1	576	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGAATTGCACTCCTGTCCC	-43798673	False	23	NA	False	NA	NA	NA	43798696	43797495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43797830_43798454
transcript_73762.known	chr19	+	2462	7	FSM	ENSG00000167637.18	ENST00000650832.1	2462	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	4.3493294502333	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAATATAATTAATATGAAA	43826710	True	NA	-16	True	NA	NA	NA	43827377	43848809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43827445_43827775_43827941_43828201_43828282_43831317_43831382_43835504_43835593_43837052_43837180_43846938
transcript_73769.known	chr19	+	2428	6	FSM	ENSG00000167637.18	ENST00000588797.6	2428	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	5.41848687365763	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATGTGTGAAGATCTTCA	43826706	True	NA	73	True	TTTAAA	-6	NA	43827373	43848898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43827445_43827775_43827941_43828201_43828282_43831317_43831382_43835504_43835593_43846938
transcript_7377.known	chr1	-	776	3	FSM	ENSG00000142867.14	ENST00000620248.2	776	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	71	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGCCTTTTAATTTTT	-85276432	False	NA	NA	False	NA	NA	NA	85276456	85267623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85267950_85270617_85270907_85276295
transcript_73774.known	chr19	-	2193	3	FSM	ENSG00000267058.1	ENST00000587128.1	2193	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	6.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACACCTTTTATTTTTTC	-43901050	True	NA	NA	False	AATAAA	-21	NA	43901805	43891803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43893141_43900867_43900955_43901036
transcript_73775.known	chr19	-	504	2	FSM	ENSG00000267058.1	ENST00000591815.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTGAAAGAGGAAAGAATT	-43900756	False	NA	NA	False	AAAAAG	-2	NA	43901511	43900917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43900955_43901044
transcript_73776.known	chr19	-	3926	10	FSM	ENSG00000124459.12	ENST00000269973.10	3926	10	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	12.3468394516348	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCCAGTGCCAAGTATTAT	-43934253	True	NA	1	True	ATTAAA	-39	NA	43935282	43912623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43915201_43918869_43918963_43919572_43919700_43922170_43922218_43924237_43924311_43924401_43924562_43925324_43925459_43932603_43932691_43934425_43934695_43934923
transcript_73777.known	chr19	+	1831	3	FSM	ENSG00000267191.3	ENST00000586247.2	1831	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATAGGTCTGGTATTTAG	43901663	True	NA	NA	False	NA	NA	NA	43901908	43927767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43902145_43925141_43925255_43926285
transcript_73779.nnic	chr19	+	402	2	NNC	ENSG00000267191.3	novel	359	2	NA	NA	-5	3989	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	39	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTAATTTTTGTAT	43901615	True	NA	NA	False	ATTAAA	-15	NA	43901860	43906325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43902132_43906194
transcript_7378.known	chr1	-	2833	3	FSM	ENSG00000142867.14	ENST00000648566.1	2833	3	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	5.5	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTAGGTTTGTGGGTTTTTG	-85276608	True	NA	NA	False	AATAAA	-18	NA	85276632	85265775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85267983_85270617_85270907_85276295
transcript_73780.nnic	chr19	+	408	2	NNC	ENSG00000267191.3	novel	413	2	NA	NA	2	3989	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	0	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCCGTCTAATTTTTGTAT	43901622	True	NA	NA	False	ATTAAA	-15	NA	43901867	43906325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43902145_43906194
transcript_73782.known	chr19	+	2382	5	FSM	ENSG00000159905.15	ENST00000587682.6	2382	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	2.29128784747792	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCGTGATCCGCCCGCCTT	43950157	True	NA	NA	False	NA	NA	NA	43951227	43967709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43951401_43962724_43962808_43964949_43965077_43965232_43965326_43965803
transcript_73783.nnic	chr19	+	2571	6	NNC	ENSG00000204920.11	novel	2612	5	NA	NA	4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.9656722000769	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	43983848	True	NA	21	True	ATTAAA	-18	NA	43984173	43998326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43984246_43988458_43988559_43991547_43991675_43991841_43991935_43996092_43998000_43998054
transcript_73784.nnic	chr19	+	2622	6	NNC	ENSG00000204920.11	novel	2612	5	NA	NA	6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	14.8323969741913	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCCTTGTGTCTGTGCTTCTT	43983874	True	NA	21	True	ATTAAA	-18	NA	43984199	43998326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_43984323_43988458_43988559_43991547_43991675_43991841_43991935_43996092_43998000_43998054
transcript_73785.known	chr19	+	2732	5	FSM	ENSG00000204920.11	ENST00000611002.4	2732	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.5666571319572	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGTGTCTGTGCTTCT	43983844	True	NA	20	True	ATTAAA	-17	NA	43984169	43998325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_73786.known	chr19	+	576	5	FSM	ENSG00000204920.11	ENST00000591532.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	14.5666571319572	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGAAGTGTAAACAGTCCAT	43983865	True	NA	NA	False	NA	NA	NA	43984190	43996307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984232_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_73788.known	chr19	+	1888	5	FSM	ENSG00000204920.11	ENST00000590615.5	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	10.4731800328267	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTGTTACCTCAAACATTT	43983891	True	NA	NA	False	NA	NA	NA	43984216	43997554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984323_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_73790.known	chr19	+	559	5	FSM	ENSG00000204920.11	ENST00000586454.1	559	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	14.5666571319572	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCTATCATAAATAACTCT	43983895	True	NA	NA	False	NA	NA	NA	43984220	43996203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_43984349_43988458_43988559_43991547_43991675_43991841_43991935_43996092
transcript_73791.known	chr19	+	4104	5	FSM	ENSG00000159882.13	ENST00000429154.7	4104	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	4.03112887414927	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGATGTAAGTTCACAATG	44002649	True	NA	NA	False	AATAAA	-18	NA	44002956	44013924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44003108_44007010_44007094_44008789_44008917_44009083_44009171_44010268
transcript_73792.known	chr19	-	400	2	FSM	ENSG00000266921.2	ENST00000670660.1	400	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGGCTTCTCTCCAA	NA	False	NA	NA	False	AGTAAA	-17	NA	44002858	43999067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_43999233_44002623
transcript_73794.known	chr19	+	1794	1	FSM	ENSG00000159882.13	ENST00000589275.1	1794	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAGTGAACTGCCATATTAT	44002651	True	NA	NA	False	AATAAA	-1	NA	44002958	44004752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44003000_44004800
transcript_73795.nic	chr19	+	1727	5	NIC	ENSG00000159885.14	novel	1614	4	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	2.8613807855649	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	44025061	True	NA	NA	False	ATTAAA	-22	NA	44025326	44033110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_44025479_44026025_44026087_44027022_44027150_44027397_44027491_44031816
transcript_73796.nnic	chr19	+	654	5	NNC	ENSG00000178386.13	novel	2399	5	NA	NA	-25	1086	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_4	13.7181449183189	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCTGTTTGTTTATGAC	44051222	True	NA	NA	False	AATATA	-15	NA	44052010	44062010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44061844
transcript_73797.known	chr19	+	2399	5	FSM	ENSG00000178386.13	ENST00000434772.8	2399	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	2.82842712474619	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTGTGTTTCTGGAAT	44051247	True	NA	NA	False	AATAAA	-27	NA	44052035	44067999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44052196_44055108_44055192_44060454_44060582_44060748_44060842_44066063
transcript_73798.known	chr19	+	4336	5	FSM	ENSG00000186026.7	ENST00000421176.4	4336	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	2.38484800354236	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAGGTGCATCACATTT	44071871	True	NA	7	True	AATAAA	-19	NA	44072158	44089613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44072292_44076321_44076405_44081014_44081142_44082012_44082106_44085713
transcript_73801.known	chr19	+	1614	4	FSM	ENSG00000159885.14	ENST00000391960.4	1614	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	2.16024689946929	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTATTTGTGTTGGAAAAA	44025113	True	NA	NA	False	ATTAAA	-22	NA	44025378	44033110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44025479_44027022_44027150_44027397_44027491_44031816
transcript_73803.nic	chr19	+	4009	6	FSM	ENSG00000267680.6	ENST00000693561.1	3993	6	-16	0	-16	0	multi-exon	FALSE	canonical	3	25	junction_1	15.2577848982085	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTTTTGAGTGTTTACA	44093772	True	NA	5	True	AATAAA	-18	NA	44094344	44109826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44094531_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_73805.known	chr19	+	3980	6	FSM	ENSG00000267680.6	ENST00000336976.10	3980	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	17.1697408250678	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTGTTTGCAGGCATTTT	44093819	True	NA	65	True	AATGAA	-26	NA	44094391	44109886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44094489_44096342_44096432_44097805_44097889_44100800_44100928_44101132_44101226_44106395
transcript_73809.known	chr19	+	4447	5	FSM	ENSG00000256294.8	ENST00000262894.11	4447	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.02336923485777	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGTGGGGCTAATATT	44112924	True	NA	18	True	ATTAAA	-28	NA	44113398	44134822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44113570_44115759_44115843_44118187_44118315_44118481_44118575_44130849
transcript_73814.known	chr19	-	3199	2	FSM	ENSG00000186019.12	ENST00000592946.1	3199	2	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTACTCTTCCTAGTGA	-44112685	True	NA	NA	False	AATAAA	-43	NA	44113145	44105462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44108338_44112821
transcript_73818.known	chr19	-	424	2	FSM	ENSG00000186019.12	ENST00000590369.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTTTTGTGTGTCCGTG	-44112496	False	NA	NA	False	ATTAAA	-19	NA	44112956	44111950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44112240_44112821
transcript_73819.nnic	chr19	-	386	2	NNC	ENSG00000186019.12	novel	5693	2	NA	NA	-45	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGTTGCCACTATTATAG	NA	False	NA	1	True	AATAAA	-21	NA	44113228	44112745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44112950_44113046
transcript_73820.known	chr19	+	1552	1	FSM	ENSG00000267680.6	ENST00000589060.1	1552	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAATGTTTTTATTACCTA	44093817	True	NA	NA	False	AAAAAG	-3	NA	44094389	44095941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44094400_44095900
transcript_73823.nnic	chr19	+	809	6	NNC	ENSG00000263002.8	novel	4607	6	NA	NA	0	1062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	19.3865933056842	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTCAGTTCTTTGTT	44140604	True	NA	NA	False	ATTAAA	-14	NA	44141553	44151567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44151185
transcript_73825.known	chr19	+	2292	6	FSM	ENSG00000263002.8	ENST00000592437.5	2292	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	13.6293800299207	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TTAAAAAAAAAAAAACAGAA	44140607	True	NA	NA	False	NA	NA	NA	44141556	44158119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44141616_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_73827.nnic	chr19	+	924	6	NNC	ENSG00000263002.8	novel	4607	6	NA	NA	0	1062	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	20.865282169192	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTTTCAGTTCTTTGTT	44140607	True	NA	NA	False	ATTAAA	-14	NA	44141556	44151567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44151185
transcript_73829.known	chr19	+	4607	6	FSM	ENSG00000263002.8	ENST00000426739.7	4607	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	16.7284189330612	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGATGTCAATGAATTG	44140604	True	NA	NA	False	ATTAAA	-25	NA	44141553	44160313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44141734_44142313_44142368_44144556_44144648_44148770_44148898_44150412_44150506_44156251
transcript_73838.known	chr19	-	800	2	FSM	ENSG00000287035.1	ENST00000654455.1	800	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGGGTGTCTTGAGTCCT	NA	False	NA	NA	False	AATAAA	-19	NA	44164955	44162526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44163122_44164750
transcript_73844.known	chr19	+	447	7	FSM	ENSG00000167380.17	ENST00000588742.5	447	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	52.5814183486482	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTGGATTTGAAGTTAGAA	44163826	True	NA	NA	False	NA	NA	NA	44165103	44175033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_73846.known	chr19	+	567	7	FSM	ENSG00000167380.17	ENST00000588127.5	567	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	49.1211653861031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTCAAATTTCTGAAGATGA	44163838	True	NA	NA	False	NA	NA	NA	44165115	44175679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165614_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_73849.known	chr19	+	817	6	FSM	ENSG00000167380.17	ENST00000300823.10	817	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	45.5543631280254	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCAGTGTGAAATCTTAAAT	44163826	True	NA	NA	False	ATTAAA	-16	NA	44165103	44175429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_73851.known	chr19	+	579	6	FSM	ENSG00000167380.17	ENST00000585678.5	579	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	37.7391043878892	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAGCAGATGGTCCCAA	44163829	True	NA	NA	False	NA	NA	NA	44165106	44175712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172091_44172215_44172859_44172953_44175497
transcript_73855.known	chr19	+	716	6	FSM	ENSG00000167380.17	ENST00000413984.6	716	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	49.8702316016278	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGTTGTAAACTGTGAGCA	44163825	True	NA	-87	True	NA	NA	NA	44165102	44175158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44174983
transcript_73857.known	chr19	+	576	6	FSM	ENSG00000167380.17	ENST00000586914.5	576	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	43.1342091616387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGACAGAGAATCAGAAGAA	44163823	True	NA	NA	False	NA	NA	NA	44165100	44175530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165587_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_73860.known	chr19	+	2605	6	FSM	ENSG00000167380.17	ENST00000454662.6	2605	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	48.3801612233775	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGTCATTTGAATTCTT	44163886	False	NA	21	True	TATAAA	-18	NA	44165163	44177687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165247_44165756_44165808_44170034_44170096_44172087_44172215_44172859_44172953_44175497
transcript_73862.known	chr19	+	641	5	FSM	ENSG00000167380.17	ENST00000588795.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	38.8096315365142	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGTCTTACACGGTGTGCT	44163838	True	NA	NA	False	AGTAAA	-21	NA	44165115	44173234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087_44172215_44172859
transcript_73865.nic	chr19	+	853	4	ISM	ENSG00000167380.17	ENST00000588795.5	641	5	-43	476	0	0	5prime_fragment	FALSE	canonical	3	47	junction_1	43.4843522303011	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTTTCAGTGTCTTGA	44163795	True	NA	NA	False	AATAAA	-12	NA	44165072	44172758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_44165143_44165756_44165808_44170034_44170096_44172087
transcript_73867.known	chr19	+	515	6	FSM	ENSG00000167380.17	ENST00000585560.5	515	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	59.6905352631387	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATGACGACAGCAACCCG	44163823	True	NA	NA	False	AAGAAA	-14	NA	44165100	44172915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44165143_44165756_44165808_44166704_44166883_44170034_44170096_44172087_44172215_44172859
transcript_73868.known	chr19	+	3049	6	FSM	ENSG00000131115.16	ENST00000313040.12	3049	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	5.74804314527997	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTAAGGACTCATGATTCTT	44211867	True	NA	15	True	AATAAA	-21	NA	44212531	44237268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228445_44228573_44229732_44229817_44234701
transcript_73872.known	chr19	+	569	6	FSM	ENSG00000131115.16	ENST00000586228.5	569	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	14.0996453856117	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCCAGTTATTACAAGGTGA	44211873	True	NA	77	True	NA	NA	NA	44212537	44234835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212586_44213089_44213245_44217790_44217853_44228486_44228573_44229732_44229817_44234701
transcript_73878.known	chr19	+	2943	5	FSM	ENSG00000131115.16	ENST00000589005.5	2943	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	11.2805141726785	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTAAGGACTCATGATTCT	44211910	True	NA	14	True	AATAAA	-20	NA	44212574	44237267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44229732_44229817_44234701
transcript_7388.known	chr1	-	2745	3	FSM	ENSG00000282057.1	ENST00000467530.5	2745	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGTGGTGATTTTATTAA	-85578050	True	NA	NA	False	ATTAAA	-13	NA	85578150	85493416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85495879_85496165_85496282_85577983
transcript_73882.known	chr19	+	2757	5	FSM	ENSG00000159915.13	ENST00000683810.1	2757	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	3.76662979332984	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	44259709	True	NA	3	True	ATTAAA	-15	NA	44259885	44275317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44259939_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_73885.known	chr19	+	2784	5	FSM	ENSG00000159915.13	ENST00000391958.6	2784	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.82182538049648	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAGTCTACAATCTGAGTAA	44259746	True	NA	3	True	ATTAAA	-15	NA	44259922	44275317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44260003_44264313_44264376_44266197_44266325_44266865_44266962_44272898
transcript_73889.known	chr19	-	532	5	FSM	ENSG00000159917.17	ENST00000589248.5	532	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	11.6484977572217	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTCTGAGGAAAATGGGAA	NA	False	NA	NA	False	TATAAA	-19	NA	44305046	44274751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44274922_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_7389.known	chr1	+	2278	5	FSM	ENSG00000142871.18	ENST00000451137.7	2278	5	0	0	0	0	multi-exon	FALSE	canonical	3	696	junction_3	34.5723878261251	2514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGTGATTTAAGAAAACAG	85564433	True	NA	NA	False	AATAAA	-16	NA	85580760	85583950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_85581048_85581364_85581579_85581927_85582285_85582415_85582625_85582739
transcript_73892.known	chr19	-	3190	5	FSM	ENSG00000159917.17	ENST00000291182.9	3190	5	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	7.61577310586391	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTTTCCTTTCATTATT	-44304245	True	NA	1	True	AGTAAA	-16	NA	44305025	44286347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44289197_44298807_44298904_44299605_44299733_44303389_44303453_44304970
transcript_73893.known	chr19	-	3162	5	FSM	ENSG00000159917.17	ENST00000650576.1	3162	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	7.61577310586391	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGAATTGTTAATACTTG	-44304245	True	NA	-15	True	AAAAAG	-12	NA	44305025	44286363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44289197_44298819_44298904_44299605_44299733_44303389_44303453_44304970
transcript_73896.known	chr19	+	584	4	FSM	ENSG00000131115.16	ENST00000588219.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	9.03081145609604	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTCTTGCGGGAATACATA	44211873	True	NA	NA	False	NA	NA	NA	44212537	44234955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212586_44213089_44213245_44228445_44228573_44234701
transcript_73899.nic	chr19	-	961	4	ISM	ENSG00000159917.17	ENST00000650576.1	3162	5	-211	12035	-190	-9594	5prime_fragment	FALSE	canonical	3	17	junction_3	5.73488351136175	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATGAAAACATCTGTCACA	NA	False	NA	NA	False	NA	NA	NA	44305236	44298398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_44298904_44299605_44299733_44303389_44303453_44304970
transcript_73900.known	chr19	+	545	5	FSM	ENSG00000131115.16	ENST00000586048.1	545	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	14.4460202131937	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGATGGAAACAGAAACCCAA	44211958	True	NA	NA	False	AAGAAA	-10	NA	44212622	44229792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44212764_44213089_44213245_44217790_44217853_44228445_44228573_44229732
transcript_73906.known	chr19	-	2388	5	FSM	ENSG00000267508.6	ENST00000591679.5	2388	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	2.1650635094611	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCACACTGGTTCCATTTC	-44401332	True	NA	NA	False	NA	NA	NA	44401575	44385928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44388103_44392339_44392467_44394519_44394541_44397198_44397257_44401567
transcript_73909.known	chr19	-	6031	4	FSM	ENSG00000267508.6	ENST00000614994.5	6031	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	1.24721912892465	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGTCCCTTATGTGTGA	-44401365	True	NA	NA	False	NA	NA	NA	44401608	44382297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44388103_44392339_44392467_44397198_44397257_44401567
transcript_7391.known	chr1	+	1868	4	FSM	ENSG00000142871.18	ENST00000675083.1	1868	4	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	343.990632947404	2401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATAAAGATTCTGAAGCTAAA	85581348	True	NA	NA	False	TTTAAA	-36	NA	85581462	85583930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_85581579_85581932_85582285_85582415_85582625_85582739
transcript_73914.known	chr19	-	4335	5	FSM	ENSG00000167384.11	ENST00000221327.8	4335	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	19.1702895126808	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTCATATTCAGTGAC	-44500495	False	NA	NA	False	AATAAA	-30	NA	44500522	44474427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497373_44500197
transcript_73915.known	chr19	-	3131	5	FSM	ENSG00000167384.11	ENST00000590088.5	3131	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	14.4308696896618	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAATACAAAGATTTCCTT	-44500497	False	NA	NA	False	AGTAAA	-20	NA	44500524	44475638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500197
transcript_73916.known	chr19	-	4248	5	FSM	ENSG00000167384.11	ENST00000592529.6	4248	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	19.536824204563	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATATAAGCCATGAACATTC	-44500495	False	NA	NA	False	AATAAA	-15	NA	44500522	44474442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44478147_44479282_44479410_44484360_44484436_44497283_44497378_44500274
transcript_73926.nnic	chr19	-	769	3	NNC	ENSG00000266903.2	novel	752	2	NA	NA	-149	2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7	111	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	-44718720	False	NA	NA	False	ATTAAA	-21	NA	44718908	44715556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44715737_44715949_44716084_44718453
transcript_73927.nnic	chr19	-	613	3	NNC	ENSG00000266903.2	novel	876	2	NA	NA	-769	2	at_least_one_novel_splicesite	FALSE	canonical	2	14	junction_1	4	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	44719528	44715556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44715737_44715949_44716084_44719229
transcript_73929.known	chr19	-	379	2	FSM	ENSG00000266903.2	ENST00000586169.1	379	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAGAATTCTGTCTGTCC	-44717585	True	NA	NA	False	NA	NA	NA	44718759	44716107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44716181_44718453
transcript_7393.known	chr1	-	6203	10	FSM	ENSG00000117174.11	ENST00000370574.4	6203	10	0	0	0	0	multi-exon	TRUE	canonical	3	98	junction_2	12.2181811501256	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGGTAACCCCTGACTT	-85703973	True	NA	NA	False	AATAAA	-20	NA	85708433	85649416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_85654099_85657846_85657972_85677235_85677314_85678700_85678782_85680835_85680905_85702156_85702261_85706077_85706164_85706248_85706356_85706441_85706508_85707628
transcript_73930.nnic	chr19	-	826	2	NNC	ENSG00000266903.2	novel	876	2	NA	NA	-769	2	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCAGGTATGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	44719528	44715556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_44716084_44719229
transcript_73931.known	chr19	-	752	2	FSM	ENSG00000266903.2	ENST00000591312.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTACCCAGTCTCAGGT	-44717511	True	NA	NA	False	ATTAAA	-14	NA	44718685	44715563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44716084_44718453
transcript_73932.known	chr19	+	819	4	FSM	ENSG00000069399.15	ENST00000474300.1	819	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	12.7104506432917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATTCTCAGGCACCAGTC	44757446	False	NA	NA	False	NA	NA	NA	44757588	44759825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44757724_44758245_44758414_44758723_44758842_44759427
transcript_73934.nic	chr19	+	891	3	ISM	ENSG00000069399.15	ENST00000444487.1	923	8	6997	-581	-210	0	3prime_fragment	FALSE	canonical	0	0	junction_1	16.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGGTGCATGGGCCT	44758240	True	NA	23	True	AATAAA	-17	NA	44758317	44760044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_44758474_44758723_44758842_44759427
transcript_73935.nnic	chr19	+	833	3	NNC	ENSG00000069399.15	novel	923	8	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	15	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTTGGGTGCATGGGCCT	44758358	False	NA	23	True	AATAAA	-17	NA	44758435	44760044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_44758534_44758723_44758842_44759427
transcript_73936.known	chr19	+	1576	11	FSM	ENSG00000142273.13	ENST00000647358.2	1576	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_4	15.7673713725529	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGCAGTGGCCAGCAGGG	44776122	True	NA	28	True	AATAAA	-38	NA	44777889	44800652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44784263_44784402_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_73938.known	chr19	+	1441	10	FSM	ENSG00000142273.13	ENST00000341505.4	1441	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	33.7401105767067	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCAGGGTGCAAAGGAAGA	44776101	True	NA	10	True	AATAAA	-20	NA	44777868	44800634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44778285_44780904_44781052_44781206_44781364_44782369_44782492_44790003_44790092_44792382_44792515_44793473_44793621_44794203_44794282_44800380_44800451_44800550
transcript_73944.known	chr19	+	2409	15	FSM	ENSG00000187244.12	ENST00000270233.12	2409	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_13	11.672398980466	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGTGGCCAGAGCTTCCT	44803358	True	NA	24	True	AATAAA	-24	NA	44809102	44821421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477_44812549_44813249_44813347_44813437_44813621_44814151_44814289_44814603_44814761_44818521_44818638_44818740_44818883_44819055_44819193_44819345_44819491_44819581_44819727_44820704_44820823_44820915
transcript_73947.known	chr19	+	904	4	FSM	ENSG00000187244.12	ENST00000588603.1	904	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	4.89897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAGAAGAAG	44803385	True	NA	NA	False	NA	NA	NA	44809129	44812953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44809207_44811224_44811347_44812162_44812392_44812477
transcript_73950.known	chr19	+	2690	9	FSM	ENSG00000130202.10	ENST00000252483.10	2690	9	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_6	425.975057955275	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGTCTTGCCTTTTCTGT	44827610	True	NA	16	True	NA	NA	NA	44846296	44889223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44846614_44865270_44865661_44871852_44872150_44873915_44874034_44874329_44874479_44882210_44882365_44885936_44886001_44886132_44886220_44888109
transcript_73951.known	chr19	-	426	2	FSM	ENSG00000267282.1	ENST00000585408.1	426	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAGATGAGTGGAGAACAAA	-44890850	False	NA	NA	False	NA	NA	NA	44890876	44882026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_44882339_44890762
transcript_73952.known	chr19	+	1709	10	FSM	ENSG00000130204.13	ENST00000405636.6	1709	10	0	0	0	0	multi-exon	FALSE	canonical	3	1390	junction_1	452.213595331309	1585	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGGGAGGCCTCCGTTTTCT	44869442	True	NA	21	True	AATATA	-17	NA	44891219	44903688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44891315_44891406_44891690_44892392_44892461_44892836_44892930_44893779_44893882_44893960_44894067_44900729_44900853_44901027_44901105_44901207_44901311_44903029
transcript_73957.known	chr19	+	689	5	FSM	ENSG00000130208.10	ENST00000588750.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_1	329.56894195297	3182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTCTCTCCTGAGTGCT	44914234	False	NA	16	True	AATAAA	-11	NA	44914246	44919342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914490_44914671_44914734_44914871_44914950_44916189_44916326_44919172
transcript_73962.known	chr19	+	553	4	FSM	ENSG00000130208.10	ENST00000588802.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_1	384.190057133185	1676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44914312	False	NA	20	True	AATAAA	-15	NA	44914324	44919346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914490_44914871_44914950_44916189_44916326_44919172
transcript_73969.known	chr19	+	1166	4	FSM	ENSG00000130203.10	ENST00000252486.9	1166	4	0	0	0	0	multi-exon	FALSE	canonical	3	5039	junction_1	243.582976964045	838	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGCTGGCCTCCCCCTGTG	44840966	True	NA	37	True	AATAAA	-21	NA	44905795	44909393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44905842_44906601_44906668_44907759_44907953_44908532
transcript_73970.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592535.6	514	4	0	0	0	0	multi-exon	FALSE	canonical	3	653	junction_1	88.3037686373326	10823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44913925	False	NA	20	True	AATAAA	-15	NA	44914607	44919346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916326_44919172
transcript_73971.known	chr19	+	273	3	FSM	ENSG00000130208.10	ENST00000589781.1	273	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_2	307	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATTCTCTCCTGAGTGCTT	44908863	False	NA	17	True	AATAAA	-12	NA	44914709	44919343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914734_44914871_44914950_44919172
transcript_73972.known	chr19	+	562	4	FSM	ENSG00000130208.10	ENST00000592885.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	340.149313619116	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTCTCTCCTGAGTGCTTC	44908856	True	NA	18	True	AATAAA	-13	NA	44914702	44919344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914734_44914871_44914950_44916189_44916471_44919172
transcript_73973.known	chr19	+	514	4	FSM	ENSG00000130208.10	ENST00000592176.1	514	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	404.94965393518	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCCTGAGTGCTTCTTTAC	44914789	True	NA	23	True	AATAAA	-18	NA	44914868	44919349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914950_44915097_44915218_44916189_44916326_44919172
transcript_73974.known	chr19	+	425	3	FSM	ENSG00000130208.10	ENST00000586638.5	425	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	387.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTCCTGAGTGCTTCTT	44914789	True	NA	20	True	AATAAA	-15	NA	44914868	44919346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914950_44916189_44916360_44919172
transcript_73975.known	chr19	+	213	2	FSM	ENSG00000130208.10	ENST00000589078.1	213	2	0	0	0	0	multi-exon	FALSE	canonical	3	781	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATCAAACAGAGTGAACTTT	44908993	False	NA	NA	False	NA	NA	NA	44914839	44916292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44914950_44916189
transcript_73980.nic	chr19	+	476	4	FSM	ENSG00000214855.10	ENST00000571466.2	439	4	-38	1	-37	0	multi-exon	FALSE	canonical	2	3	junction_3	14.2672897060218	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGGCCAGGCATGGTGG	NA	False	NA	8	True	AATAAA	-18	NA	44926761	44931193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44926830_44926955_44927034_44927794_44927931_44930999
transcript_73982.known	chr19	+	279	3	FSM	ENSG00000214855.10	ENST00000589081.2	301	3	19	3	16	-1	multi-exon	FALSE	canonical	1	1	junction_2	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTCTGGCCAGGCATGG	NA	False	NA	5	True	AATAAA	-15	NA	44926819	44931190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44926830_44926955_44927034_44930999
transcript_73984.known	chr19	+	660	4	FSM	ENSG00000234906.11	ENST00000252490.7	660	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGAGACTAATCTTTATTG	NA	False	NA	NA	False	AATAAA	-37	NA	44946050	44949565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44946076_44948465_44948534_44948700_44948861_44949158
transcript_73985.known	chr19	+	2732	14	FSM	ENSG00000104853.16	ENST00000541297.6	2732	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	209.380602459709	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGGCCGGGCCCCCCT	NA	False	NA	NA	False	NA	NA	NA	44954590	44993196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44955086_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_73986.known	chr19	+	2470	14	FSM	ENSG00000104853.16	ENST00000337392.10	2470	14	0	0	0	0	multi-exon	FALSE	canonical	3	654	junction_13	59.3106354652346	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCACTGCCCCTCCTCCTCGT	44942510	True	NA	34	True	AATAAA	-28	NA	44955379	44993341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_44955468_44961962_44962076_44973086_44973211_44974438_44974598_44977342_44977461_44985217_44985304_44986454_44986576_44987178_44987424_44988079_44988174_44990394_44990586_44990849_44990946_44991237_44991374_44992232_44992401_44992610
transcript_73998.known	chr19	+	599	2	FSM	ENSG00000104859.15	ENST00000588247.5	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTCACGAGTTCGAGACC	45032403	True	NA	NA	False	NA	NA	NA	45039073	45040747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45039109_45040183
transcript_73999.known	chr19	+	506	6	FSM	ENSG00000104859.15	ENST00000591904.1	506	6	0	0	0	0	multi-exon	TRUE	canonical	1	10	junction_3	74.5047649482904	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTCTCAGTGTCATCTG	45068403	False	NA	42	True	AATAAA	-25	NA	45068419	45070955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45068481_45069065_45069125_45069201_45069249_45069943_45070105_45070536_45070562_45070802
transcript_74.known	ERCC-00154	+	521	1	FSM	ERCC-00154A	DQ854997	521	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	39	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00154_+_0_500
transcript_7400.nic	chr1	-	2948	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	-5	626	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	14.2340919977356	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTTGTACTCTCTTTT	NA	False	NA	-3	True	TATAAA	-21	NA	86396347	86348110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_74005.known	chr19	+	576	3	FSM	ENSG00000142252.11	ENST00000591747.5	576	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	138.5	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTAAGGCACTGTATCCCA	45073369	True	NA	36	True	CATAAA	-27	NA	45079257	45090537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079280_45079906_45080030_45090106
transcript_7401.nic	chr1	-	2322	17	NIC	ENSG00000122417.15	novel	7560	18	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_15	14.2340919977356	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTCTAAGTAGTAGATT	NA	False	NA	-10	True	AATAAA	-13	NA	86396347	86348736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86356443_86356603_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_74012.known	chr19	+	848	2	FSM	ENSG00000142252.11	ENST00000591607.1	848	2	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	0	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTCCCCAGTGCTCCCCTC	45079177	False	NA	-35	True	ATTAAA	-30	NA	45079194	45090869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079280_45090106
transcript_74013.known	chr19	+	716	2	FSM	ENSG00000142252.11	ENST00000391951.2	716	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	1562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGAATGCTCTACCTCAC	45073380	True	NA	NA	False	AGTAAA	-35	NA	45079268	45090713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079378_45090106
transcript_74015.known	chr19	+	1653	3	FSM	ENSG00000142252.11	ENST00000270257.9	1653	3	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_1	70.5	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCGCGAAAGTGCGGCGGCC	45073371	True	NA	NA	False	AGTAAA	-22	NA	45079259	45091518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45079378_45079906_45080030_45090106
transcript_74027.known	chr19	-	805	6	FSM	ENSG00000007255.10	ENST00000006275.8	805	6	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_5	116.976236903057	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178092
transcript_74028.known	chr19	-	758	6	FSM	ENSG00000007255.10	ENST00000585934.1	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	141.481588908239	2579	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGACTCAGAGCAGTGGGG	-45172637	True	NA	-10	True	AATAAA	-17	NA	45178237	45162932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45165126_45165195_45178134
transcript_74038.known	chr19	-	514	5	FSM	ENSG00000007255.10	ENST00000592647.1	514	5	0	0	0	0	multi-exon	TRUE	canonical	3	72	junction_4	214.622197127883	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGACGGTGGGGCCGCT	-45172627	True	NA	NA	False	NA	NA	NA	45178227	45163140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178092
transcript_74039.known	chr19	-	695	5	FSM	ENSG00000007255.10	ENST00000588062.5	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_4	215.919545201448	1168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGAGCAGTGGGGGAGGA	-45172637	True	NA	-5	True	AATAAA	-22	NA	45178237	45162927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45163224_45163915_45164010_45164163_45164248_45164852_45164971_45178134
transcript_74057.known	chr19	-	3191	12	FSM	ENSG00000283632.4	ENST00000413988.3	3191	12	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_10	9.33490738399522	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGGGCTGAGTCCTGAGT	-45245323	False	84	-2	True	AATAAA	-21	NA	45245407	45212369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45213358_45216072_45216195_45217527_45217684_45218196_45218320_45224777_45224914_45227661_45227773_45227973_45228075_45228164_45228267_45231762_45231875_45234192_45234827_45238522_45239062_45245340
transcript_74058.known	chr19	-	1556	8	FSM	ENSG00000104879.5	ENST00000221476.4	1556	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTTGTGCGATAGTTATTG	NA	False	NA	NA	False	AATAAA	-17	NA	45322875	45306412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45306929_45307460_45307651_45308408_45308533_45311748_45311921_45315464_45315598_45317824_45317980_45319520_45319732_45322820
transcript_74060.known	chr19	-	3110	24	FSM	ENSG00000104884.17	ENST00000682414.1	3110	24	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	33.5866680724915	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTTGTGGAGGATTTCTT	-45364966	True	NA	NA	False	GGGGCT	-30	NA	45370588	45350412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45351031_45351467_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_74061.known	chr19	-	4108	23	FSM	ENSG00000104884.17	ENST00000391945.10	4108	23	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_22	19.2016269971803	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTGCCAGCTTCCG	-45364951	True	NA	-25	True	AATAAA	-16	NA	45370573	45349836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_74062.known	chr19	-	4013	22	FSM	ENSG00000104884.17	ENST00000684407.1	4013	22	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_21	34.1228938117236	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTGCCACCTGTGCCTG	-45364966	True	NA	-35	True	AATAAA	-6	NA	45370588	45349846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45351722_45352208_45352353_45352505_45352650_45352745_45352817_45353082_45353156_45353241_45353335_45354729_45354852_45355664_45355729_45357269_45357372_45357473_45357544_45357629_45357700_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370535
transcript_74065.known	chr19	+	1764	13	FSM	ENSG00000104892.17	ENST00000585434.5	1764	13	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_3	12.1275054685161	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAAATGTCACCTGACT	45340294	True	NA	11	True	ATTAAA	-17	NA	45340760	45351515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45340847_45345533_45345800_45346543_45346775_45347449_45347517_45347940_45348161_45348645_45348734_45348819_45348922_45349428_45349603_45350340_45350432_45350513_45350552_45350640_45350748_45350953_45351018_45351285
transcript_74066.nic	chr19	-	1445	13	NIC	ENSG00000104884.17	novel	1538	12	NA	NA	0	2	combination_of_known_junctions	FALSE	canonical	1	4	junction_1	42.8896355001221	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGTGTTGGAATATG	-45364970	True	NA	NA	False	NA	NA	NA	45370592	45358756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_45358913_45361523_45361643_45363742_45363912_45363985_45364120_45364234_45364332_45364423_45364548_45364837_45364955_45365041_45365159_45368629_45368744_45368929_45368993_45369069_45369148_45370132_45370233_45370535
transcript_74067.nic	chr19	-	834	3	ISM	ENSG00000104881.16	ENST00000593226.5	525	5	1217	630	-41	521	internal_fragment	FALSE	canonical	3	8	junction_2	5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAGAAAGAAAGAAAGAAAG	-45404284	True	NA	NA	False	AAGAAA	-10	NA	45405110	45397501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45398148_45398263_45398340_45404998
transcript_7407.known	chr1	-	2155	16	FSM	ENSG00000122417.15	ENST00000370566.7	2155	16	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	19.992665321729	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCTCTAAGTAGTAGAT	-86394980	True	NA	-11	True	AATAAA	-12	NA	86396340	86348737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86348879_86352858_86352985_86354529_86354693_86354773_86354860_86358786_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86385457_86385591_86386914_86387087_86396032
transcript_74072.known	chr19	-	3379	10	FSM	ENSG00000012061.16	ENST00000300853.8	3379	10	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_9	74.1136931084455	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGACTCACCTCTAAT	-45421730	True	NA	-1	True	AATAAA	-19	NA	45423917	45407333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_74073.known	chr19	-	1453	10	FSM	ENSG00000012061.16	ENST00000589165.5	1453	10	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_9	89.0006242175363	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTGCCAAGGAAACCCCCA	-45424325	False	NA	-62	True	NA	NA	NA	45424367	45409667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45413676_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423822
transcript_74077.known	chr19	-	949	9	FSM	ENSG00000012061.16	ENST00000340192.11	949	9	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	108.183799041261	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCTGCGCTGGTGCA	-45423797	False	NA	-8	True	AATAAA	-22	NA	45423839	45409613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45413676_45413746_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269_45423382_45423780
transcript_74089.known	chr19	-	738	7	FSM	ENSG00000012061.16	ENST00000589381.5	738	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	105.583168902792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGCTCTGGGAAAGAA	-45423443	False	NA	NA	False	NA	NA	NA	45423485	45413676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45423269
transcript_74105.known	chr19	+	1061	2	FSM	ENSG00000117877.11	ENST00000592852.1	1061	2	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGCAGCTGAAAGAACC	45402624	True	NA	NA	False	AAGAAA	-4	NA	45406661	45408619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45407236_45408132
transcript_74106.known	chr19	+	1830	3	FSM	ENSG00000117877.11	ENST00000589804.1	1830	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	93	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTAGAGTGGGGTTTTGGTT	45402653	True	NA	13	True	ATTAAA	-21	NA	45406690	45409786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45406725_45407093_45407236_45408132
transcript_74107.known	chr19	-	836	6	FSM	ENSG00000012061.16	ENST00000591636.5	836	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	132.084821232419	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGCTCCTGCTGGCTGCGCTG	-45423459	False	NA	-13	True	AATAAA	-17	NA	45423501	45409618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45409726_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_74108.known	chr19	-	1278	8	FSM	ENSG00000012061.16	ENST00000013807.9	1278	8	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	52.7059614023588	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGGTGTGAGCTTGCTAC	-45423524	False	NA	0	True	AATAAA	-17	NA	45423566	45413433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45413746_45413962_45414035_45414860_45414961_45416820_45416898_45419097_45419198_45420323_45420428_45421177_45421394_45423269
transcript_74110.known	chr19	-	1127	7	FSM	ENSG00000125744.12	ENST00000430715.6	1127	7	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_6	24.7616414821168	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45493141	False	NA	-23	True	AATAAA	-16	NA	45493267	45485293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45493159
transcript_74111.known	chr19	-	2063	10	FSM	ENSG00000125744.12	ENST00000344680.8	2063	10	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_6	48.4424056655599	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGAGGCCTCTTGTGCTTC	-45496501	True	NA	-23	True	AATAAA	-16	NA	45497055	45485293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45489345_45489554_45494165_45494421_45494525_45495006_45495094_45495140_45496791
transcript_74117.known	chr19	-	546	6	FSM	ENSG00000125744.12	ENST00000588036.5	546	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	69.6247082579166	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCGTTCCCACCCACCCCCCT	-45492536	True	NA	NA	False	NA	NA	NA	45493238	45485637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45485790_45486054_45486114_45488470_45488518_45488636_45488707_45488847_45488987_45493159
transcript_74118.known	chr19	+	872	5	FSM	ENSG00000213889.11	ENST00000396737.6	872	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	62.499499998	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	45497056	True	NA	NA	False	ATTAAA	-45	NA	45497250	45502510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45497344_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_74131.known	chr19	+	618	4	FSM	ENSG00000213889.11	ENST00000456399.6	618	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	66.0454389038335	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAATCGAAAAAAAAAAAAAA	45497036	True	NA	NA	False	AAAAAG	-11	NA	45497230	45502302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45497344_45499953_45500067_45500455_45500562_45502016
transcript_74154.known	chr19	+	895	5	FSM	ENSG00000213889.11	ENST00000396735.6	895	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	41.4306649717332	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGACATGTTTTGCCT	45499395	False	NA	NA	False	ATTAAA	-45	NA	45499609	45502510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45499726_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_74155.known	chr19	+	771	5	FSM	ENSG00000213889.11	ENST00000401705.5	771	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	68.104698809994	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	CCCAAATCGAAAAAAAAAAA	NA	False	NA	NA	False	AAAAAG	-8	NA	45488776	45502299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45488980_45499948_45500067_45500455_45500562_45500649_45500711_45502016
transcript_74156.known	chr19	+	2242	13	FSM	ENSG00000125753.14	ENST00000245932.11	2242	13	0	0	0	0	multi-exon	TRUE	canonical	3	602	junction_6	78.8472503571868	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTAAGATCTCTGGAGTGA	45494875	True	NA	16	True	AATAAA	-19	NA	45507478	45526983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45507777_45517662_45517835_45517928_45518095_45521321_45521407_45522167_45522218_45522339_45522582_45522717_45522819_45523643_45523696_45523840_45523878_45524096_45524143_45524569_45524661_45525945_45526004_45526139
transcript_74163.nnic	chr19	-	1823	3	NNC	ENSG00000125741.5	novel	7811	2	NA	NA	-36	-2872	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	33	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATCTTCAAGTTGATGCAT	-45583410	True	NA	-10	True	AATAAA	-18	NA	45584878	45549152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45549643_45552834_45553912_45584622
transcript_74164.known	chr19	-	2250	2	FSM	ENSG00000125741.5	ENST00000323060.3	2250	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	ATTAAAAAAAAAAAAAAAAA	-45583374	True	NA	NA	False	NA	NA	NA	45584842	45527426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45529457_45584622
transcript_74165.known	chr19	-	7811	2	FSM	ENSG00000125741.5	ENST00000263275.5	7811	2	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCAGCCCGGTTTAAT	-45583334	True	NA	NA	False	ATTAAA	-14	NA	45584802	45546280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45553912_45584622
transcript_74167.nnic	chr19	-	778	2	NNC	ENSG00000125741.5	novel	2250	2	NA	NA	-2	-29227	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTAAGACTCCTGGCTGGG	-45583376	True	NA	NA	False	AATAAA	-43	NA	45584844	45582110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45582667_45584622
transcript_74169.known	chr19	-	2791	22	FSM	ENSG00000125746.18	ENST00000536630.5	2791	22	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_19	26.7930677736915	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTGTCAGGGTCTATG	-45643070	True	NA	-21	True	AATAAA	-13	NA	45643727	45609401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45641640_45641749_45641917_45642042_45642133_45642353_45643578
transcript_74172.known	chr19	-	2234	19	FSM	ENSG00000125746.18	ENST00000245925.8	2234	19	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_18	24.959535153158	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45639379	False	657	-19	True	AATAAA	-15	NA	45639397	45609399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616460_45616559_45616764_45616854_45617629_45617698_45619059_45619192_45621206_45621333_45621482_45621638_45624718_45624819_45626704_45626840_45629950_45630047_45632860_45632972_45633069_45633140_45634321_45634472_45638504_45638635_45638844_45638874_45639356
transcript_74174.nic	chr19	-	818	5	ISM	ENSG00000125746.18	ENST00000588308.5	2062	17	22513	0	-383	0	3prime_fragment	TRUE	canonical	3	15	junction_4	45.8966229694517	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGTCAGGGTCTATGTA	-45616640	True	NA	-19	True	AATAAA	-15	NA	45616878	45609399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801_45615890_45616764
transcript_74176.known	chr19	-	705	4	FSM	ENSG00000125746.18	ENST00000592433.5	705	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	5.90668171555645	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGCCAGGGAAGAGTCAGG	-45615914	False	NA	NA	False	NA	NA	NA	45616152	45609661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45609789_45613540_45613672_45614604_45614701_45615801
transcript_74181.nic	chr19	+	1243	2	NIC	ENSG00000267757.4	novel	886	3	NA	NA	-48	0	intron_retention	FALSE	canonical	3	3	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCGGGCGTGGTGGCGCGTG	NA	False	NA	NA	False	AATAAA	-35	NA	45641445	45642840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_45642073_45642224
transcript_74193.known	chr19	-	615	4	FSM	ENSG00000125743.11	ENST00000391932.7	615	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	4277.64930254404	2927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45643955	True	NA	-18	True	AATAAA	-16	NA	45691941	45687462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45689232_45689348_45691886
transcript_74196.known	chr19	-	596	4	FSM	ENSG00000125743.11	ENST00000587367.5	596	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	4349.88538801758	2797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGTATCTGTTTCCAGA	-45643954	True	NA	-17	True	AATAAA	-17	NA	45691940	45687461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45690571_45690668_45691886
transcript_7420.known	chr1	-	1422	11	FSM	ENSG00000122417.15	ENST00000488879.6	1422	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	17.4610996217306	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAACCAAAAATAAAAA	-86394926	True	NA	NA	False	AGTAAA	-41	NA	86396286	86358816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86358892_86360425_86360537_86371017_86371154_86372430_86372541_86376232_86376419_86382241_86382359_86382930_86383003_86383133_86383197_86384675_86384802_86386914_86387087_86396032
transcript_74200.known	chr19	-	702	4	FSM	ENSG00000125743.11	ENST00000588301.5	702	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	4017.92143609935	28163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45692301	False	NA	-18	True	AATAAA	-16	NA	45692316	45687462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45691886_45691993_45692165
transcript_74202.known	chr19	-	379	3	FSM	ENSG00000125743.11	ENST00000585392.2	379	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	4620	1358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643931	True	NA	-15	True	AATAAA	-19	NA	45691917	45687459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688467_45691886
transcript_74208.known	chr19	-	515	3	FSM	ENSG00000125743.11	ENST00000342669.8	515	3	0	0	0	0	multi-exon	FALSE	canonical	3	7559	junction_2	844	42079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTATCTGTTTCCAGAGC	-45643967	True	NA	-15	True	AATAAA	-19	NA	45691953	45687459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45691886
transcript_74209.known	chr19	-	805	3	FSM	ENSG00000125743.11	ENST00000588599.5	805	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	4611.5	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTGGTATCTGTTTCCAG	-45691756	False	NA	-18	True	AATAAA	-16	NA	45691771	45687462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687728_45688386_45688567_45691411
transcript_74210.known	chr19	-	454	3	FSM	ENSG00000125743.11	ENST00000590212.1	454	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	3754.5	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGACCGCTGCCATTGGTGT	-45643931	True	NA	-66	True	NA	NA	NA	45691917	45687510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45687754_45688386_45688567_45691886
transcript_74211.nnic	chr19	-	423	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-31	-10086	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATGAAAAAGCCAGAGT	-45727574	True	NA	NA	False	AAAAAG	-17	NA	45730927	45723541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45723886_45730848
transcript_74212.nnic	chr19	-	298	2	NNC	ENSG00000177051.6	novel	2993	2	NA	NA	-31	-10211	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGAATTAGTTGGGCTTGG	-45727574	True	NA	NA	False	AAGAAA	-7	NA	45730927	45723666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_45723886_45730848
transcript_74213.known	chr19	-	3344	3	FSM	ENSG00000177045.11	ENST00000317578.7	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGGGGTCTGGGGTGCCTT	-45765115	True	NA	-5	True	AATAAA	-21	NA	45769252	45764784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45766112_45766349_45767156_45768041
transcript_74214.known	chr19	-	1809	2	FSM	ENSG00000177045.11	ENST00000560160.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGCCCTGCCGCTGTGTCT	-45768579	False	NA	-18	True	NA	NA	NA	45768627	45764888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45766112_45768041
transcript_74215.known	chr19	-	643	2	FSM	ENSG00000185800.12	ENST00000598237.1	643	2	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	-45790351	False	NA	NA	False	NA	NA	NA	45792437	45790566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45791088_45792315
transcript_74216.known	chr19	-	782	1	FSM	ENSG00000185800.12	ENST00000602469.1	782	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGACTGCTCTTGGCTTCTG	-45788090	False	NA	-14	True	AGTAAA	-19	NA	45790176	45789394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45789400_45790200
transcript_74217.known	chr19	+	483	3	FSM	ENSG00000267395.5	ENST00000586251.5	483	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCGTCTCTCCGTGGTTTC	45770954	False	NA	14	True	NA	NA	NA	45770981	45772504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45771080_45771489_45771676_45772305
transcript_74218.known	chr19	-	4077	27	FSM	ENSG00000125755.19	ENST00000245934.12	4077	27	0	0	0	0	multi-exon	TRUE	canonical	3	182	junction_18	24.8107928891235	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGGGCGCGGGTGCCGTCTC	-45848079	True	NA	32	True	AAAAAG	-13	NA	45863147	45815409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797_45816975_45817958_45818147_45821383_45821486_45822755_45822847_45823371_45823473_45823766_45823876_45825170_45825332_45826225_45826374_45827509_45827624_45827836_45827919_45828969_45829206_45830053_45830205_45831383_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_74221.known	chr19	-	1899	12	FSM	ENSG00000125755.19	ENST00000598896.5	1899	12	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_3	16.4362027345302	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTTTTTATGTCTAAAAT	-45848064	True	NA	NA	False	NA	NA	NA	45863132	45831169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45831589_45835077_45835229_45838460_45838616_45842249_45842490_45844029_45844201_45847751_45848002_45848749_45848877_45852311_45852386_45852481_45852536_45854174_45854241_45854390_45854508_45863057
transcript_74225.known	chr19	-	995	4	FSM	ENSG00000125755.19	ENST00000598364.1	995	4	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_3	24.3447461820136	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGATGTGAACTTGGGC	-45816842	True	NA	13	True	AAAAAG	-4	NA	45817133	45815467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_45815698_45815850_45816184_45816481_45816578_45816797
transcript_74227.nic	chr19	-	848	3	ISM	ENSG00000125755.19	ENST00000598364.1	995	4	387	-20	387	0	3prime_fragment	FALSE	canonical	3	279	junction_2	11	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTTACTGAAAAGAAAAAA	-45816717	False	NA	-6	True	AATAAA	-17	NA	45816746	45815447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_45815698_45815850_45816184_45816481
transcript_74229.known	chr19	+	1923	2	FSM	ENSG00000170608.3	ENST00000302177.3	1923	2	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAATGTCTCTTTTCCTTG	45862536	True	NA	33	True	ATTAAA	-21	NA	45864325	45873797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45864526_45872074
transcript_74234.known	chr19	+	433	4	FSM	ENSG00000104983.8	ENST00000594672.5	433	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	39.6063967897443	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGGCCCGGGTTGGCGGG	45993531	True	NA	NA	False	NA	NA	NA	45995470	46003501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_45995505_45996244_45996402_46003007_46003167_46003418
transcript_74237.known	chr19	-	680	4	FSM	ENSG00000188624.3	ENST00000341415.3	680	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTTCATGCAACCTGATT	-46123981	False	NA	NA	False	AATAAA	-25	NA	46124688	46120066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46120358_46123885_46124157_46124267_46124322_46124624
transcript_74243.known	chr19	+	2101	13	FSM	ENSG00000124440.16	ENST00000244302.8	2101	13	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_2	14.2563338750029	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	46292742	True	NA	54	True	NA	NA	NA	46297045	46331513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155
transcript_74248.known	chr19	+	5856	15	FSM	ENSG00000124440.16	ENST00000377670.9	5856	15	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_14	17.7851405529952	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGCGTGTTGACTCATC	46292738	True	NA	16	True	CATAAA	-25	NA	46297041	46343433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46297103_46303897_46304089_46305244_46305391_46308220_46308306_46308662_46308776_46309150_46309360_46312160_46312268_46312505_46312654_46320442_46320562_46321775_46321967_46325534_46325640_46329206_46329479_46331155_46331274_46334904_46334987_46339524
transcript_74249.known	chr19	+	1929	12	FSM	ENSG00000011485.15	ENST00000391919.1	1929	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	282.899947269859	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGTCTCTGGATGGTGGA	46332411	True	NA	22	True	AATAAA	-18	NA	46347107	46390852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46347218_46353747_46353990_46375603_46375752_46376452_46376575_46383779_46383879_46384803_46384910_46387092_46387236_46387365_46387454_46388407_46388449_46388552_46388732_46390050_46390133_46390283
transcript_7425.known	chr1	-	1650	2	FSM	ENSG00000122417.15	ENST00000478286.2	1650	2	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCAAGTTTCGAGCTACTT	-86394963	True	NA	NA	False	AATAAA	-29	NA	86396323	86385727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86387087_86396032
transcript_74250.known	chr19	-	3236	1	FSM	ENSG00000169515.8	ENST00000307522.5	3236	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGGTGCCTGTGTGGCTCTG	-46410184	True	NA	-8	True	AAAACA	-42	NA	46413564	46410328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46410300_46413600
transcript_74251.known	chr19	-	3684	3	FSM	ENSG00000182013.18	ENST00000313683.15	3684	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	5.5	185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCTGTTAAGTCTCTTG	-46469005	True	NA	-21	True	AATAAA	-15	NA	46471563	46466502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46468578_46469732_46471115_46471336
transcript_74255.known	chr19	-	506	3	FSM	ENSG00000230510.8	ENST00000593359.2	506	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAAGCCACCAACCTTG	NA	False	NA	NA	False	AATAAA	-11	NA	46600931	46525475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46525785_46526924_46527073_46600882
transcript_74258.known	chr19	-	611	2	FSM	ENSG00000230510.8	ENST00000595691.1	611	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATAGCAAGTCCTATGT	-46489686	False	NA	NA	False	AATATA	-16	NA	46490120	46481084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46481441_46489865
transcript_74263.known	chr19	+	702	6	FSM	ENSG00000160014.17	ENST00000391918.6	702	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	1581.62377321536	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGCATGATTGCTCTTTCT	46601040	False	NA	22	True	GATAAA	-22	NA	46601073	46609305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46601177_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_74267.known	chr19	+	540	6	FSM	ENSG00000160014.17	ENST00000594523.5	540	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1594.56539533504	1248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTGATCTCTCTCTTCT	46549411	True	NA	NA	False	NA	NA	NA	46601365	46609182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46601438_46605826_46605858_46608204_46608341_46608481_46608589_46608845_46608982_46609124
transcript_7427.known	chr1	-	311	2	FSM	ENSG00000122417.15	ENST00000486215.1	311	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCCAAATCTAGTATT	-86394617	False	NA	NA	False	TATAAA	-36	NA	86395977	86386808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86387087_86395944
transcript_74273.known	chr19	+	1203	6	FSM	ENSG00000160014.17	ENST00000596362.1	1203	6	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_1	1587.56056892328	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACTGACAGTGGGCAAC	46602031	True	NA	NA	False	NA	NA	NA	46602071	46609770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46602211_46605826_46605858_46608196_46608341_46608481_46608589_46608845_46608982_46609124
transcript_74280.known	chr19	-	216	2	ISM	ENSG00000167414.5	ENST00000693335.1	435	3	1517	123	1517	-61	3prime_fragment	FALSE	canonical	2	3	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCGGACAGCTTACCC	-46634673	False	NA	NA	False	NA	NA	NA	46634685	46634075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_46634205_46634598
transcript_74282.known	chr19	-	2352	1	FSM	ENSG00000279161.1	ENST00000624917.1	2352	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-46639149	True	NA	NA	False	NA	NA	NA	46639161	46636809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46636800_46639200
transcript_74283.known	chr19	-	2923	17	FSM	ENSG00000105287.13	ENST00000600194.5	2923	17	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_16	32.7890987982287	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACGGCACTCTCGAAT	-46714301	False	NA	-12	True	ATTAAA	-35	NA	46714324	46674319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862
transcript_74285.known	chr19	-	1682	10	FSM	ENSG00000105287.13	ENST00000597589.5	1682	10	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_5	27.7145948090911	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGGCCCCATGGCCTT	-46697261	True	NA	-38	True	ATTAAA	-9	NA	46697341	46674345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156
transcript_74286.known	chr19	-	1043	5	FSM	ENSG00000105287.13	ENST00000602155.5	1043	5	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_4	17.6971042829046	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACACGGCACTCTCGAATC	-46689629	False	NA	-11	True	ATTAAA	-36	NA	46689709	46674318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536
transcript_74287.known	chr19	-	3588	18	FSM	ENSG00000105287.13	ENST00000291281.9	3588	18	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_17	34.3417588568798	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACGGCACTCTCGAATCATT	-46712971	True	NA	-8	True	ATTAAA	-39	NA	46717114	46674315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46674736_46675032_46675119_46678395_46678664_46681649_46681749_46689536_46689699_46690599_46690707_46691734_46691808_46691932_46691986_46693874_46694134_46697156_46697235_46697732_46697851_46700798_46700953_46701034_46701113_46704168_46704392_46704494_46704650_46710906_46711039_46713862_46714002_46716130
transcript_74288.known	chr19	-	2608	19	FSM	ENSG00000090372.15	ENST00000539396.5	2608	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_18	216.620251438626	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGACTCCAGAAGGTGCC	NA	False	NA	NA	False	NA	NA	NA	46746994	46720070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46720339_46720535_46720772_46721985_46722073_46722241_46722341_46722809_46722951_46723113_46723285_46724806_46724929_46725331_46725380_46725472_46725649_46727451_46727547_46727893_46728008_46728617_46728778_46730731_46730874_46733038_46733237_46736822_46736902_46738163_46738238_46738784_46738889_46746148_46746212_46746763
transcript_74290.known	chr19	-	1750	8	FSM	ENSG00000105281.12	ENST00000412532.6	1750	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	311.127836447086	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACATTTTTTTTAGCAATAA	-46787329	False	NA	-4	True	NA	NA	NA	46787342	46774923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787238
transcript_74291.known	chr19	-	2882	8	FSM	ENSG00000105281.12	ENST00000542575.6	2882	8	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_7	92.8512086015875	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTGTTCTTGAGAATTT	-46764461	True	NA	-5	True	AATAAA	-21	NA	46788594	46774882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516_46784560_46787399
transcript_74293.known	chr19	-	2031	7	FSM	ENSG00000105281.12	ENST00000594991.5	2031	7	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_4	83.113877702022	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAGGTGTTCTTGAGAAT	-46784892	False	245	-7	True	AATAAA	-19	NA	46784905	46774884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46775748_46776974_46777110_46777210_46777406_46778674_46778909_46782382_46782550_46784096_46784145_46784516
transcript_74295.known	chr19	+	556	5	FSM	ENSG00000181027.11	ENST00000595868.5	556	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.3455421221531	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGCAGCAAGACCCAGCCCA	46744582	True	NA	NA	False	NA	NA	NA	46746057	46755660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46746091_46747233_46747295_46748026_46748089_46748514_46748666_46755411
transcript_74296.known	chr19	+	383	3	FSM	ENSG00000181027.11	ENST00000600681.5	383	3	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	10	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAATCTCGGCTCACTGCAA	46744582	True	NA	NA	False	NA	NA	NA	46746057	46748802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46746091_46748026_46748089_46748514
transcript_7431.known	chr1	-	961	1	FSM	ENSG00000261737.1	ENST00000565575.1	961	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTGTCTATTTTAGATC	-86704449	True	NA	0	True	AATAAA	-16	NA	86704462	86703501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86703500_86704500
transcript_74310.known	chr19	-	829	5	FSM	ENSG00000042753.12	ENST00000599990.5	829	5	0	0	0	0	multi-exon	FALSE	canonical	1	14	junction_4	1005.56128604874	1918	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46850739	False	NA	-4	True	AATAAA	-28	NA	46850769	46838157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850655
transcript_74316.known	chr19	-	636	4	FSM	ENSG00000042753.12	ENST00000593442.5	636	4	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_3	1074.25229811251	1969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46831482	True	NA	-4	True	AATAAA	-28	NA	46850834	46838157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46850763
transcript_7432.known	chr1	+	1199	11	FSM	ENSG00000097033.14	ENST00000482504.1	1199	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	105.100951470479	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGTATTTATATACAATT	86704873	True	NA	-39	True	NA	NA	NA	86704894	86743268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728442_86730087_86730112_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_74323.known	chr19	-	789	5	FSM	ENSG00000042753.12	ENST00000263270.11	789	5	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_4	352.97547719353	19990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCGTCTTTGAGCCCTT	-46831494	True	NA	-13	True	AATAAA	-19	NA	46850846	46838166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850763
transcript_74324.known	chr19	-	554	2	FSM	ENSG00000042753.12	ENST00000597421.1	554	2	0	0	0	0	multi-exon	FALSE	canonical	3	1621	junction_1	0	1199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAATTTTTTTTGCTGGTGCG	-46831473	True	NA	-2	True	ATTAAA	-22	NA	46850825	46845650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46846143_46850763
transcript_74325.known	chr19	-	793	5	FSM	ENSG00000042753.12	ENST00000352203.8	793	5	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_3	981.853699641652	755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGGAACCAGATACCTAGG	-46850605	False	NA	18	True	NA	NA	NA	46850777	46838135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839621_46845992_46846143_46850763
transcript_74326.known	chr19	-	898	5	FSM	ENSG00000042753.12	ENST00000601498.5	898	5	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_4	853.448006617861	4675	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGCCCTTGCCTGTCTC	-46850286	False	NA	-4	True	AATAAA	-28	NA	46850316	46838157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992_46846143_46850133
transcript_74327.known	chr19	-	707	4	FSM	ENSG00000042753.12	ENST00000597020.5	707	4	0	0	0	0	multi-exon	FALSE	canonical	3	1959	junction_3	233.832323590122	1356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCCTTGCCGTCTTTGAG	-46846116	False	NA	-18	True	AATAAA	-14	NA	46846148	46838171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_46838549_46838739_46838800_46839464_46839579_46845992
transcript_74328.known	chr19	+	9290	7	FSM	ENSG00000160007.19	ENST00000672722.1	9290	7	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	20.2402239776804	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTGAGAGAAGTGAAGGGGG	46858001	True	NA	18	True	AATAAA	-22	NA	46860996	47005077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_46861210_46918487_46922357_46937263_46937409_46987988_46988067_46989543_46989676_46999303_46999410_47000330
transcript_74330.nic	chr19	+	833	2	ISM	ENSG00000130751.10	ENST00000594257.1	498	5	-57	6147	-36	-4003	5prime_fragment	FALSE	canonical	3	49	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTAGCTGGGTATGGTGG	NA	False	NA	NA	False	AATACA	-13	NA	47035292	47036730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_47035359_47035963
transcript_74331.known	chr19	+	1341	8	FSM	ENSG00000130751.10	ENST00000439365.6	1341	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	13.8755400703864	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTGGTTTGGGCTCCGGGCT	47035060	True	NA	9	True	ATTAAA	-17	NA	47035328	47045758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47035359_47035963_47036130_47039035_47039152_47039406_47039565_47040443_47040551_47041024_47041126_47042809_47042905_47045190
transcript_74332.known	chr19	-	655	3	FSM	ENSG00000130748.7	ENST00000253047.7	655	3	0	0	0	0	multi-exon	FALSE	canonical	3	1027	junction_1	6	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCAGAGTATTGGTTCGT	-47045167	True	NA	-7	True	ATTAAA	-20	NA	47048624	47045908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47046253_47046592_47046686_47048406
transcript_74345.known	chr19	+	2106	9	FSM	ENSG00000142230.13	ENST00000596995.1	2106	9	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	971.949072739925	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGCTTGTTTTTCTTCCA	47101875	True	NA	20	True	AATAAA	-16	NA	47130888	47210190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131113_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_7435.known	chr1	+	6456	10	FSM	ENSG00000097033.14	ENST00000616170.4	6456	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	93.7478888651188	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	86702158	True	NA	1	True	AATAAA	-8	NA	86704569	86748176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86728402_86728490_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_7436.known	chr1	+	6371	9	FSM	ENSG00000097033.14	ENST00000370558.8	6371	9	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_4	31.5453542538359	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTTGCTAAATCTCGTA	86702164	True	NA	9	True	AATAAA	-16	NA	86704575	86748184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86715723_86715866_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_74363.known	chr19	+	2522	9	FSM	ENSG00000142230.13	ENST00000270225.12	2522	9	0	0	0	0	multi-exon	FALSE	canonical	3	2804	junction_8	145.97345649124	2394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGCAGCAGTTAGTCGGG	47101821	True	NA	22	True	AATAAA	-22	NA	47130834	47210636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47197232_47197378_47203670_47203741_47209158
transcript_74364.known	chr19	+	1851	8	FSM	ENSG00000142230.13	ENST00000392776.3	1851	8	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_6	987.283202758449	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTTACTTGCTTTAGG	47101881	True	NA	0	True	TTTAAA	-10	NA	47130894	47210170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47203670_47203741_47209158
transcript_74365.known	chr19	+	2211	10	FSM	ENSG00000142230.13	ENST00000414294.6	2211	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	1250.51634767502	820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTTTTCTTCCAC	47101845	True	NA	21	True	AATAAA	-17	NA	47130858	47210191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47131029_47143493_47143606_47150201_47150376_47152897_47153041_47155113_47155214_47169817_47169924_47180145_47180304_47197232_47197378_47203670_47203741_47209158
transcript_74368.nnic	chr19	-	1404	3	NNC	ENSG00000105327.18	novel	1538	3	NA	NA	-360	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	103.5	836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	-47227494	False	NA	-7	True	AATAAA	-18	NA	47227549	47220823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_47221919_47226563_47226755_47227431
transcript_74369.known	chr19	-	1538	3	FSM	ENSG00000105327.18	ENST00000341983.8	1538	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	105.5	821	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	-47232754	False	NA	-7	True	AATAAA	-18	NA	47232766	47220823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47221919_47226563_47226755_47232514
transcript_74370.known	chr19	-	1347	2	FSM	ENSG00000105327.18	ENST00000300880.11	1347	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	782	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATACTCTTTCTGCTTGCCT	-47232754	False	NA	-7	True	AATAAA	-18	NA	47232766	47220823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47221919_47232514
transcript_74371.known	chr19	+	2027	12	FSM	ENSG00000105321.14	ENST00000221922.11	2027	12	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_1	18.1581664345402	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACATTCCCCCAGGTGTGT	47254401	True	NA	9	True	AATAAA	-18	NA	47256524	47271953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47256610_47258329_47258404_47258558_47258664_47260320_47260423_47260587_47260840_47264602_47264687_47264772_47264947_47266610_47266793_47270406_47270454_47270552_47270689_47271081_47271188_47271273
transcript_74377.known	chr19	+	4338	17	FSM	ENSG00000134815.19	ENST00000328771.9	4338	17	0	0	0	0	multi-exon	TRUE	canonical	3	103	junction_1	54.4665895297291	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGCTCACTCCCGTA	47343372	True	NA	18	True	AATAAA	-27	NA	47349314	47382704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47349353_47352753_47353736_47355038_47355351_47357865_47358121_47359967_47360071_47362475_47362694_47366980_47367156_47372729_47372924_47373598_47373701_47375465_47375709_47375923_47376098_47376442_47376561_47377099_47377207_47379709_47379986_47380815_47380993_47381185_47381325_47381979
transcript_74378.known	chr19	-	1758	13	FSM	ENSG00000105419.18	ENST00000441740.6	1758	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_8	32.773104657461	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-47419241	False	NA	-12	True	GATAAA	-17	NA	47419315	47403123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414816_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_74379.known	chr19	-	2021	13	FSM	ENSG00000105419.18	ENST00000558555.6	2021	13	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_8	25.8632890836069	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACCAACTGGAGTTCTTG	-47418355	True	NA	-12	True	GATAAA	-17	NA	47419527	47403123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47403554_47406459_47406527_47406887_47406972_47407078_47407138_47407351_47407429_47409098_47409248_47409435_47409548_47414716_47414867_47415050_47415102_47416651_47416703_47416803_47416964_47417177_47417351_47419069
transcript_74391.known	chr19	-	1636	12	FSM	ENSG00000118162.14	ENST00000338134.8	1636	12	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	24.8186813136549	438	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47481500	True	NA	-16	True	NA	NA	NA	47484219	47475149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47475545_47476531_47476715_47476802_47476939_47477705_47477782_47479862_47479941_47480297_47480408_47480759_47480834_47480957_47481034_47483160_47483216_47483294_47483380_47483501_47483585_47483934
transcript_7440.known	chr1	+	6227	8	FSM	ENSG00000097033.14	ENST00000535010.5	6227	8	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	83.6608800882638	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAACATTGTGTTGCTAA	86702158	True	NA	1	True	AATAAA	-8	NA	86704569	86748176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86704972_86719506_86719636_86722539_86722674_86724312_86724406_86734601_86734692_86735078_86735180_86742207_86742437_86743127
transcript_74405.nic	chr19	-	1044	4	ISM	ENSG00000118162.14	ENST00000602193.5	588	7	-17	1961	-13	-1857	intron_retention	FALSE	canonical	3	151	junction_2	7.93025150224688	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCTTTGGGGACCAGAGAG	-47484260	False	NA	NA	False	AATAAA	-31	NA	47484278	47482683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_47483216_47483294_47483380_47483501_47483585_47483934
transcript_74406.nic	chr19	-	697	4	ISM	ENSG00000118162.14	ENST00000602193.5	588	7	-17	2308	-13	-2204	intron_retention	FALSE	canonical	3	151	junction_2	7.93025150224688	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTAGGGATTGAAAACTAAAA	-47484260	False	NA	1	True	AATAAA	-15	NA	47484278	47483030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_47483216_47483294_47483380_47483501_47483585_47483934
transcript_74407.nnic	chr19	-	784	3	NIC	ENSG00000118162.14	novel	1636	12	NA	NA	3510	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	98.5	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGTTGTCTCGATTC	-47480053	False	NA	-16	True	NA	NA	NA	47480068	47475149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_47475545_47476531_47476715_47479862
transcript_74412.known	chr19	-	4959	10	FSM	ENSG00000118160.14	ENST00000236877.11	4959	10	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	4.00308522992263	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGAGGAGGGGTGTGTGTG	-47471380	True	NA	-1	True	AATAAA	-24	NA	47471893	47428016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47430466_47432166_47432446_47437461_47437562_47437848_47437974_47441168_47441187_47441336_47441441_47447808_47448232_47456929_47457595_47465728_47466420_47471788
transcript_74422.known	chr19	-	1417	9	FSM	ENSG00000105402.8	ENST00000594001.5	1417	9	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_8	152.166027746012	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGCCCAAGAAAGAAAA	-47507009	True	NA	-46	True	NA	NA	NA	47515058	47487679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47514842
transcript_74426.known	chr19	+	1753	3	FSM	ENSG00000268061.5	ENST00000593284.5	1753	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTTTGACAAGTTATTT	47484188	True	NA	NA	False	TTTAAA	-13	NA	47484281	47496382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47484525_47493446_47493602_47495027
transcript_74427.nnic	chr19	+	741	3	NNC	ENSG00000268061.5	novel	1753	3	NA	NA	-13	-1062	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGACTGCCTGTGGAGTG	NA	False	NA	NA	False	AATGAA	-3	NA	47484268	47495320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_47484525_47493446_47493639_47495027
transcript_74428.known	chr19	-	1662	11	FSM	ENSG00000105402.8	ENST00000263354.8	1662	11	0	0	0	0	multi-exon	FALSE	canonical	3	550	junction_8	38.5985751032341	1025	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCTCTTCCTCCTCACCT	-47507014	True	NA	-3	True	AATAAA	-20	NA	47515063	47487636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47500632_47500750_47503422_47503503_47514842
transcript_74429.known	chr19	-	1460	10	FSM	ENSG00000105402.8	ENST00000595227.5	1460	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	197.871887721872	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTGGCCCAAGAAAGAAAAT	-47506971	True	NA	-45	True	NA	NA	NA	47515020	47487678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47488390_47489710_47489762_47490787_47490857_47492014_47492120_47492960_47493046_47493118_47493175_47493415_47493494_47495549_47495597_47503422_47503503_47514842
transcript_74430.known	chr19	-	582	1	FSM	ENSG00000277383.1	ENST00000611423.1	582	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTGTTGTTGTGTTAT	-47607909	False	NA	1	True	AATAAA	-24	NA	47608454	47607872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_47607900_47608500
transcript_74431.known	chr19	+	3506	6	FSM	ENSG00000024422.12	ENST00000263277.8	3506	6	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_3	11.1785508899857	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCAGTGAGGCTGGCTT	47712607	True	NA	13	True	AATAAA	-18	NA	47713421	47743134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47713539_47716557_47717017_47718508_47718607_47725811_47726225_47736368_47736534_47740880
transcript_74444.known	chr19	+	1504	13	FSM	ENSG00000105373.19	ENST00000246802.10	1504	13	0	0	0	0	multi-exon	TRUE	canonical	3	927	junction_12	129.572695168902	2906	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGGGCTCCACGTGTGG	47738443	True	NA	27	True	AATAAA	-18	NA	47745545	47757058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47745784_47746966_47747032_47750177_47750287_47750907_47751108_47751519_47751591_47752511_47752608_47754526_47754632_47754708_47754892_47755347_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47756998
transcript_74445.known	chr19	+	303	5	FSM	ENSG00000105373.19	ENST00000594182.1	303	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	578.268103910288	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCAGTGGGCTCCACGTGTG	47755342	True	NA	26	True	AATAAA	-17	NA	47755473	47757057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47755524_47755755_47755823_47756527_47756605_47756687_47756745_47757005
transcript_74455.known	chr19	+	881	7	NNC	ENSG00000178980.16	novel	758	6	NA	NA	-92	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1802.41813652906	5187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGTGCCTGTGAGGAGTGT	47778279	False	NA	30	True	AATAAA	-20	NA	47778584	47784684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_47778815_47780119_47780132_47780733_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_74477.known	chr19	+	717	5	FSM	ENSG00000178980.16	ENST00000601419.5	717	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	1608.36438657414	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATTCAATAAATATTGGATG	47737025	True	NA	0	True	NA	NA	NA	47778690	47784654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47778815_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_74487.known	chr19	+	758	6	FSM	ENSG00000178980.16	ENST00000601048.6	758	6	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_3	147.725420967415	54063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAATGTGCCTGTGAGGAGT	47737037	True	NA	28	True	AATAAA	-18	NA	47778702	47784682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_74488.known	chr19	+	550	6	FSM	ENSG00000178980.16	ENST00000593892.5	550	6	0	0	0	0	multi-exon	TRUE	canonical	2	87	junction_5	1468.23739224963	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGCCTCAGGCATCCTTC	47737011	True	NA	-90	True	NA	NA	NA	47778676	47784564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47778815_47780724_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784405
transcript_74489.known	chr19	+	2437	5	FSM	ENSG00000178980.16	ENST00000598273.5	2437	5	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_2	153.511196660048	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAATGTGCCTGTGAGGAG	47778902	False	NA	27	True	AATAAA	-17	NA	47778932	47784681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47780750_47780863_47780918_47781107_47781183_47781289_47781389_47784289
transcript_74490.known	chr19	+	674	4	FSM	ENSG00000178980.16	ENST00000601937.5	674	4	0	0	0	0	multi-exon	FALSE	canonical	3	3659	junction_1	138.602549279105	1545	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTGTGAGGAGTGTAT	47780802	False	NA	32	True	AATAAA	-22	NA	47780814	47784686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47780918_47781107_47781183_47781289_47781389_47784289
transcript_74491.known	chr19	+	312	3	FSM	ENSG00000178980.16	ENST00000599627.1	312	3	0	0	0	0	multi-exon	FALSE	canonical	3	3663	junction_1	146	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGAGATTGACGCCCCCGG	47781033	False	NA	NA	False	NA	NA	NA	47781079	47784399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_47781183_47781289_47781389_47784289
transcript_74492.nic	chr19	-	1130	4	ISM	ENSG00000105499.14	ENST00000354276.7	2496	17	48566	0	5715	0	3prime_fragment	FALSE	canonical	2	5	junction_1	21.6999743983464	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGTGTGTGTCTTG	NA	False	NA	0	True	AATAAA	-25	NA	48062216	48047843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48048389_48052953_48053148_48054877_48055050_48061997
transcript_74493.nic	chr19	-	1085	4	ISM	ENSG00000105499.14	ENST00000599921.6	2486	17	48601	0	5715	0	3prime_fragment	FALSE	canonical	3	50	junction_3	1.24721912892465	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	NA	False	NA	-2	True	AATAAA	-23	NA	48062216	48047845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48048389_48052996_48053148_48054877_48055050_48061997
transcript_74494.nnic	chr19	-	889	3	NIC	ENSG00000105499.14	novel	2496	17	NA	NA	5784	0	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGTGTGTGTGTGTCTTG	-48061401	True	NA	0	True	AATAAA	-25	NA	48062147	48047843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48048389_48052953_48053148_48061997
transcript_74496.nnic	chr19	-	840	3	NIC	ENSG00000105499.14	novel	2486	17	NA	NA	5809	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	23.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	-48061376	True	NA	-2	True	AATAAA	-23	NA	48062122	48047845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48048389_48054877_48055050_48061997
transcript_74498.known	chr19	-	876	3	FSM	ENSG00000105499.14	ENST00000594790.1	876	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGTGTGTGTGTGTCT	-48054313	False	NA	-2	True	AATAAA	-23	NA	48055059	48047845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48048389_48052996_48053148_48054877
transcript_74501.known	chr19	-	3125	28	FSM	ENSG00000105486.14	ENST00000263274.12	3125	28	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_27	88.6403624462092	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGACAGGGTCTGTGC	-48164301	True	NA	-9	True	AATAAA	-18	NA	48170344	48115444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151340_48153871_48153968_48157013_48157141_48161371_48161508_48162261_48162352_48165549_48165624_48170240
transcript_74503.known	chr19	-	3027	27	FSM	ENSG00000105486.14	ENST00000427526.6	3027	27	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_25	141.446311975949	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTACTTTGTGACAGGGTC	-48164301	True	NA	-14	True	AATAAA	-13	NA	48170344	48115449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48115733_48115872_48115966_48117637_48117782_48119136_48119191_48121169_48121323_48122933_48123017_48123173_48123319_48127276_48127349_48127909_48128021_48131075_48131172_48132981_48133098_48133980_48134067_48135679_48135780_48136033_48136126_48137007_48137085_48137521_48137689_48139970_48140144_48143542_48143600_48143882_48143964_48149762_48149842_48150087_48150211_48151231_48151337_48153871_48153968_48157013_48157141_48161371_48161508_48165549_48165624_48170240
transcript_74508.known	chr19	-	602	4	FSM	ENSG00000105486.14	ENST00000600055.1	602	4	0	0	0	0	multi-exon	FALSE	canonical	2	281	junction_3	85.5686858611256	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGTTAGGTCTTGGATGCC	-48164301	True	NA	NA	False	NA	NA	NA	48170344	48161173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48161508_48162261_48162352_48165549_48165624_48170240
transcript_74515.known	chr19	-	1903	12	FSM	ENSG00000105483.18	ENST00000521613.5	1903	12	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_10	16.3378584837399	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTGGCATGTACCTATTG	NA	False	NA	NA	False	NA	NA	NA	48255946	48211565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249750_48249848_48255791
transcript_74523.known	chr19	-	579	6	FSM	ENSG00000105483.18	ENST00000521437.1	579	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	35.2454252350571	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAAACTGTTGGTTGACAA	-48254971	True	NA	NA	False	NA	NA	NA	48255897	48238474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48238533_48240961_48241064_48242539_48242645_48249522_48249634_48249750_48249848_48255791
transcript_74526.known	chr19	-	614	5	FSM	ENSG00000105483.18	ENST00000520007.5	614	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_2	12.3161479367536	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATTGGTTTATGTACA	-48254972	True	NA	-8	True	ATTAAA	-14	NA	48255898	48238335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48238533_48240961_48241064_48249522_48249634_48249750_48249848_48255791
transcript_74536.known	chr19	-	500	4	FSM	ENSG00000105483.18	ENST00000519332.5	500	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	27.7168220079832	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTGGTTTATGTACATT	-48254967	True	NA	-6	True	ATTAAA	-16	NA	48255893	48238333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48238533_48240961_48241064_48249750_48249848_48255791
transcript_74544.known	chr19	-	2617	12	FSM	ENSG00000105483.18	ENST00000520153.5	2617	12	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_2	14.6851248738982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGTTGAGTCAGTTTTTT	-48248900	False	NA	0	True	TTTAAA	-22	NA	48249826	48210786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48211976_48215339_48215385_48218870_48219013_48221729_48221856_48230437_48230701_48230776_48231007_48231659_48231811_48232452_48232494_48234402_48234544_48240961_48241064_48249522_48249634_48249750
transcript_74545.known	chr19	+	1969	2	FSM	ENSG00000268001.1	ENST00000602172.1	1969	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTACTGGTCTTCTCACCTA	NA	False	NA	NA	False	AATAAA	-23	NA	48255674	48258199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48255795_48256350
transcript_74556.known	chr19	-	437	3	FSM	ENSG00000268186.1	ENST00000600941.1	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	-48271267	False	NA	0	True	AATAAA	-18	NA	48271283	48262899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48263185_48270144_48270234_48271220
transcript_74558.nnic	chr19	-	621	3	NNC	ENSG00000268186.1	novel	437	3	NA	NA	-579	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	-48271824	True	NA	0	True	AATAAA	-18	NA	48271862	48262899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48263185_48270144_48270234_48271615
transcript_74559.nnic	chr19	-	549	3	NNC	ENSG00000268186.1	novel	437	3	NA	NA	-911	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	3	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGGTCTATGATACTTTTG	NA	False	NA	0	True	AATAAA	-18	NA	48272194	48262899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48263185_48270144_48270234_48272019
transcript_7456.known	chr1	-	831	5	FSM	ENSG00000183291.18	ENST00000469566.5	831	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	591.617010827106	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAACAGATTTCTAAATTAGA	-86914404	False	NA	NA	False	NA	NA	NA	86914424	86863166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914314
transcript_74562.known	chr19	+	683	6	FSM	ENSG00000142227.11	ENST00000597279.5	683	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	62.6852454729181	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324800	True	NA	11	True	AATAAA	-14	NA	48325580	48330553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48325990_48326054_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_74563.nic	chr19	+	1123	5	NIC	ENSG00000142227.11	novel	753	4	NA	NA	-64	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_1	51.1682274463363	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48321094	True	NA	11	True	AATAAA	-14	NA	48321444	48330553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48321978_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_74566.known	chr19	+	502	5	FSM	ENSG00000142227.11	ENST00000593437.1	502	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.5412456194066	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCCTCCAAAAAATAAAACCT	48324827	False	NA	-18	True	NA	NA	NA	48325607	48330524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327562_48329351_48329493_48330300
transcript_74567.known	chr19	+	649	5	FSM	ENSG00000142227.11	ENST00000270221.11	649	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	15.7321327225523	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324771	True	NA	11	True	AATAAA	-14	NA	48325551	48330553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327624_48329351_48329493_48330300
transcript_74569.known	chr19	+	667	5	FSM	ENSG00000142227.11	ENST00000599255.5	667	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	50.2910280268757	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTTAACCGCGGGCTCTG	48324780	True	NA	-3	True	NA	NA	NA	48325560	48330539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48326829_48326923_48327520_48327665_48329351_48329493_48330300
transcript_74574.known	chr19	+	761	4	FSM	ENSG00000142227.11	ENST00000596315.5	761	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	56.334319517995	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGCCTTGATCTTCCTT	48324996	False	NA	11	True	AATAAA	-14	NA	48325346	48330553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48327520_48327624_48329351_48329493_48330300
transcript_74578.known	chr19	+	263	3	FSM	ENSG00000142227.11	ENST00000594198.1	263	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	61	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAAGCACCCGCGAGGGG	48324763	True	NA	NA	False	NA	NA	NA	48325543	48330355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48325611_48329351_48329493_48330300
transcript_74582.known	chr19	-	2263	8	FSM	ENSG00000161558.11	ENST00000293261.8	2263	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_6	26.6105702490494	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAGGCTACTCTTAACGC	-48363692	False	NA	NA	False	AATAAA	-19	NA	48363940	48332355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48360071_48360177_48363290_48363532_48363897
transcript_74585.known	chr19	-	2272	7	FSM	ENSG00000161558.11	ENST00000435956.7	2272	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	33.8312807259133	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGGATGAGGCTACTCTT	-48363811	False	NA	NA	False	AATAAA	-14	NA	48364059	48332360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48345159_48345355_48363290_48363532_48363897
transcript_74587.known	chr19	-	1960	6	FSM	ENSG00000161558.11	ENST00000377431.6	1960	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	52.784088511596	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAGGCTACTCTTAACG	-48363307	True	NA	NA	False	AATAAA	-18	NA	48363938	48332356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48333434_48334007_48334198_48342529_48342810_48343320_48343452_48363290_48363532_48363897
transcript_74588.known	chr19	+	1042	5	FSM	ENSG00000105467.9	ENST00000344846.7	1042	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	0.82915619758885	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCTCAGTCCTTCTCATGT	NA	False	NA	NA	False	AATAAA	-37	NA	48364366	48376377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48364538_48365735_48365936_48373516_48373755_48375612_48375753_48376084
transcript_74594.known	chr19	-	1550	5	FSM	ENSG00000105438.9	ENST00000330720.7	1550	5	0	0	0	0	multi-exon	TRUE	canonical	3	917	junction_4	65.0499807840095	7005	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTTCTTTTGCTGCTCCTT	-48362203	True	NA	-15	True	AATAAA	-16	NA	48391551	48382574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423_48390525_48391267
transcript_74595.known	chr19	-	1594	4	FSM	ENSG00000105438.9	ENST00000597017.5	1594	4	0	0	0	0	multi-exon	FALSE	canonical	3	1002	junction_2	35.8608421540822	454	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACCTTTCTTTTGCTGCTC	-48390565	False	NA	-18	True	AATAAA	-13	NA	48390855	48382577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48383328_48384229_48384483_48389552_48389712_48390423
transcript_74604.known	chr19	+	4443	12	FSM	ENSG00000105443.16	ENST00000452733.7	4443	12	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	25.9153102583227	444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGAATGTGATCTGATT	48461848	True	NA	28	True	ATTAAA	-17	NA	48469368	48482314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48474950_48478068_48478146_48478274_48478347_48478437_48478593_48479122
transcript_74615.known	chr19	+	5361	7	FSM	ENSG00000105447.13	ENST00000253237.10	5361	7	0	0	0	0	multi-exon	FALSE	canonical	3	628	junction_4	21.9974746025286	350	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGCTCTGTTGCCCAGGC	48435969	True	NA	NA	False	NA	NA	NA	48445982	48457022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48446193_48446384_48446503_48446680_48446844_48450312_48450527_48450665_48450809_48451033_48451232_48452707
transcript_74622.known	chr19	+	4652	11	FSM	ENSG00000105443.16	ENST00000493260.5	4652	11	0	0	0	0	multi-exon	TRUE	canonical	3	255	junction_1	24.9967997951738	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGCCTGCTGACCCCCT	48461826	True	NA	NA	False	NA	NA	NA	48469346	48479382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48469527_48470352_48470501_48470602_48470670_48472324_48472444_48473297_48473379_48473904_48474018_48474181_48474331_48474837_48478146_48478274_48478347_48478437_48478593_48479122
transcript_74623.nic	chr19	-	725	2	ISM	ENSG00000142235.13	ENST00000648216.1	2222	5	7092	0	7092	0	3prime_fragment	FALSE	canonical	3	20	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGGCCTGTGCGTATTT	-48491059	True	NA	-6	True	AAAAAG	-24	NA	48491313	48485270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48485790_48491107
transcript_74624.known	chr19	-	454	1	FSM	ENSG00000142235.13	ENST00000598924.1	454	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCATGTATCTTTTGTATG	-48513628	False	NA	-15	True	AATAAA	-18	NA	48513660	48513206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48513200_48513700
transcript_74625.nnic	chr19	+	812	5	NNC	ENSG00000088002.12	novel	1423	2	NA	NA	-2025	0	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_2	3.83242742918897	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTTCCTTGATGCGCT	NA	False	NA	6	True	AATAAA	-14	NA	48589075	48599423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48589196_48591608_48591736_48592721_48592817_48596738_48596920_48599134
transcript_74637.known	chr19	-	559	6	FSM	ENSG00000063177.13	ENST00000552588.5	559	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2081.00885149487	6561	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416500	True	NA	-35	True	ATTAAA	-17	NA	48619181	48615330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48619140
transcript_74643.known	chr19	-	3844	1	FSM	ENSG00000063177.13	ENST00000547892.1	3844	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTGCTCTGTGTGTGTTATT	-48416494	True	NA	-36	True	ATTAAA	-16	NA	48619175	48615331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615300_48619200
transcript_74644.known	chr19	-	628	7	FSM	ENSG00000063177.13	ENST00000549370.5	628	7	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	1862.01474662975	4457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACAGTGCTCTGTGTGTGT	-48416495	True	NA	-40	True	ATTAAA	-12	NA	48619176	48615335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617416_48617790_48617878_48619140
transcript_74645.known	chr19	-	440	5	FSM	ENSG00000063177.13	ENST00000547897.5	440	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2162.90227472255	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTGTGTGTGTTATTGG	-48416487	True	NA	-34	True	ATTAAA	-18	NA	48619168	48615329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_74646.known	chr19	-	1645	5	FSM	ENSG00000063177.13	ENST00000552347.5	1645	5	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_4	692.908904546622	4219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTGTGTTATTGGGG	-48416482	True	NA	-32	True	ATTAAA	-20	NA	48619163	48615327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48617424_48617790_48617878_48619140
transcript_74647.known	chr19	-	1036	6	FSM	ENSG00000063177.13	ENST00000549273.5	1036	6	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_5	634.086240191348	2217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCTACTCTCTTATTAAAA	-48416496	True	NA	-70	True	NA	NA	NA	48619177	48615365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_74648.known	chr19	-	2091	4	FSM	ENSG00000063177.13	ENST00000551749.5	2091	4	0	0	0	0	multi-exon	FALSE	canonical	3	3823	junction_3	788.970637391954	641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416502	True	NA	-35	True	ATTAAA	-17	NA	48619183	48615330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615947_48616078_48617424_48617790_48617878_48619140
transcript_74649.known	chr19	-	1111	7	FSM	ENSG00000063177.13	ENST00000550973.5	1111	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	1961.24574923412	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCCGAGGCTACAAAAACTA	-48619113	False	NA	-97	True	NA	NA	NA	48619127	48615392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615947_48616078_48616203_48616725_48616825_48617315_48617424_48617790_48617878_48618559
transcript_74650.known	chr19	-	463	6	FSM	ENSG00000063177.13	ENST00000550645.5	463	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2039.37690484128	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTCTGTGTGTGTTATTG	-48416482	True	NA	-35	True	ATTAAA	-17	NA	48619163	48615330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48615448_48615876_48615906_48616725_48616825_48617315_48617424_48617790_48617878_48619140
transcript_74651.known	chr19	+	2748	7	FSM	ENSG00000063176.16	ENST00000245222.9	2748	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619116	True	NA	29	True	AATAAA	-23	NA	48619505	48630405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48619544_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_74652.known	chr19	+	2866	7	FSM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	36.8634869032579	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48619144	True	NA	29	True	AATAAA	-23	NA	48619533	48630405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48619690_48620401_48620554_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_74655.known	chr19	+	2492	6	FSM	ENSG00000063176.16	ENST00000340932.7	2492	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	47.9808295051263	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCTTCTGCCCTTCCTCCAT	48619222	False	NA	30	True	AATAAA	-24	NA	48619290	48630406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48619544_48620401_48620554_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_74660.known	chr19	+	2683	6	FSM	ENSG00000063176.16	ENST00000599748.5	2683	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	33.0853441874193	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACCTTCTGCCCTTCCTCCA	48624941	False	NA	29	True	AATAAA	-23	NA	48624951	48630405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48625077_48625890_48626363_48627691_48627842_48627974_48628070_48628161_48628278_48628680
transcript_74665.nic	chr19	+	1019	5	ISM	ENSG00000063176.16	ENST00000597434.5	1542	6	361	2318	24	-252	5prime_fragment	FALSE	canonical	3	11	junction_1	46.9920205992464	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCCAGCTCCTGGACATTT	48622601	True	NA	NA	False	AGTAAA	-24	NA	48624366	48628399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48624431_48625890_48626363_48627691_48627842_48627974_48628070_48628161
transcript_74670.known	chr19	-	712	3	FSM	ENSG00000105516.11	ENST00000593500.1	712	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	45	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGACGTGATAATGCAGAT	-48634266	False	157	NA	False	NA	NA	NA	48634526	48630730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48631053_48633443_48633656_48634348
transcript_74671.known	chr19	-	709	3	FSM	ENSG00000105516.11	ENST00000599385.5	709	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	48.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGAGCCTCCCCCCTCCCTT	-48634376	False	NA	NA	False	GATAAA	-24	NA	48634636	48630684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48631053_48633443_48633656_48634507
transcript_74672.nnic	chr19	-	1534	3	NNC	ENSG00000105516.11	novel	709	3	NA	NA	-893	123	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	49	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGCTGTTGTGGAAGA	-48635448	False	NA	-5	True	AATAAA	-15	NA	48635529	48630561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48631053_48633443_48633656_48634698
transcript_74676.nic	chr19	+	515	2	ISM	ENSG00000063176.16	ENST00000601712.5	1394	6	-188	8017	-29	-5541	5prime_fragment	FALSE	canonical	3	27	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTGGAGGCCAGGCGTGGT	NA	False	NA	NA	False	TTTAAA	-14	NA	48619261	48620634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48619544_48620401
transcript_74677.nic	chr19	+	390	2	ISM	ENSG00000063176.16	ENST00000598088.5	2866	7	0	9770	0	-5540	5prime_fragment	FALSE	canonical	3	27	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTGGAGGCCAGGCGTGGTA	48619144	True	NA	NA	False	TTTAAA	-15	NA	48619533	48620635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48619690_48620401
transcript_74678.known	chr19	+	1786	1	FSM	ENSG00000063176.16	ENST00000598574.1	1786	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	48624993	False	NA	NA	False	NA	NA	NA	48625028	48626814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48625000_48626800
transcript_74680.nnic	chr19	-	1037	8	NNC	ENSG00000063180.9	novel	1715	9	NA	NA	1256	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_7	79.7383476229139	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGGTCTGATTCTAG	-48644919	False	4889	-4	True	ATTAAA	-22	NA	48644931	48638014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48644843
transcript_74688.known	chr19	-	1715	9	FSM	ENSG00000063180.9	ENST00000084798.9	1715	9	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_4	18.533331459832	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATCTTCCTCTTTCTAAA	-48641298	True	NA	-2	True	ATTAAA	-21	NA	48646187	48637945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48638145_48638887_48639054_48639304_48639460_48639548_48639622_48639787_48639884_48640094_48640281_48644426_48644570_48645402_48645478_48645565
transcript_74689.known	chr19	-	381	2	FSM	ENSG00000063180.9	ENST00000599267.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGTGGTCTGATTCTAG	-48639126	False	NA	-4	True	ATTAAA	-22	NA	48639138	48638014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48638145_48638887
transcript_74690.known	chr19	-	275	2	FSM	ENSG00000063180.9	ENST00000594088.1	275	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCAGTGGTCTGATTCTA	-48638373	False	NA	-5	True	ATTAAA	-21	NA	48638385	48638015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48638145_48638239
transcript_74692.known	chr19	+	1593	3	FSM	ENSG00000176920.13	ENST00000391876.5	1593	3	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	7	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTAAATGTTTGCAG	48695600	True	NA	NA	False	NA	NA	NA	48696038	48705614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48696080_48702954_48704209_48705316
transcript_74693.nnic	chr19	+	431	2	NIC	ENSG00000176920.13	novel	312	2	NA	NA	-45	2	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGCCCTACGTTATTG	48695487	True	NA	3	True	AATAAA	-15	NA	48695925	48696645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48696090_48696378
transcript_74694.known	chr19	+	312	2	FSM	ENSG00000176920.13	ENST00000522283.1	312	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTGATGGCCCTACGTTAT	48695594	True	NA	1	True	AATAAA	-13	NA	48696032	48696643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48696080_48696378
transcript_74695.nnic	chr19	+	379	2	NNC	ENSG00000176920.13	novel	312	2	NA	NA	-29	2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGGCCCTACGTTATTG	48695503	True	NA	3	True	AATAAA	-15	NA	48695941	48696645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48696080_48696404
transcript_74696.known	chr19	+	1449	2	FSM	ENSG00000176920.13	ENST00000522966.2	1449	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTAATCCCAGCTACTC	48695532	True	NA	NA	False	AATACA	-27	NA	48695970	48704294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48696080_48702954
transcript_74698.nic	chr19	-	1183	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2796	-271	2682	0	3prime_fragment	FALSE	canonical	2	12	junction_1	4	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGGTGGCTCACGCCTGCG	-48713763	True	NA	0	True	ATTAAA	-18	NA	48714161	48712724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48713551_48713715_48713771_48713859
transcript_74699.nic	chr19	-	911	3	ISM	ENSG00000176909.12	ENST00000356751.8	1825	8	2796	1	2682	0	3prime_fragment	FALSE	canonical	2	12	junction_1	4	57	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACCTCATGGATGTTCTT	-48713763	True	NA	-5	True	NA	NA	NA	48714161	48712996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_48713551_48713715_48713771_48713859
transcript_74700.known	chr19	-	3199	12	FSM	ENSG00000105538.10	ENST00000222145.9	3199	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_10	16.4286586928538	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCGCCTCGATTGTTAAGACT	-48740553	True	NA	-23	True	AATAAA	-20	NA	48740610	48720584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48720998_48721853_48722002_48724336_48724510_48724716_48724961_48726784_48726889_48727006_48727159_48727392_48727431_48728936_48729591_48735195_48735552_48738959_48739646_48740145_48740287_48740520
transcript_74706.nnic	chr19	+	696	4	Antisense	novelGene_ENSG00000105538.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.24721912892465	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGGAGTGTTCCATCTCA	48720738	True	NA	NA	False	AATAAA	-23	NA	48720789	48731515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_48720925_48724698_48724848_48728206_48728369_48731265
transcript_74708.nnic	chr19	+	672	4	Antisense	novelGene_ENSG00000105538.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCCTCCATTGGACTC	48720704	False	NA	NA	False	AATAAA	-16	NA	48720731	48734993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_48720925_48724698_48724848_48728206_48728369_48734825
transcript_74713.known	chr19	+	893	3	FSM	ENSG00000105550.10	ENST00000222157.5	893	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCATGTGTGAGTGTCTG	48756073	False	NA	NA	False	AATAAA	-23	NA	48756086	48758333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48756472_48756925_48757030_48757929
transcript_74717.known	chr19	-	2041	12	FSM	ENSG00000105552.15	ENST00000402551.5	2041	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_11	87.28854023409	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTGTCGGGCTTCTTCAG	-48810009	True	NA	-3	True	AATAAA	-15	NA	48811027	48795064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48807755_48808237_48810983
transcript_74719.known	chr19	-	1579	11	FSM	ENSG00000105552.15	ENST00000597011.5	1579	11	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_10	60.4668504223595	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGTCTTTGCTGCAAT	-48810906	False	NA	-2	True	NA	NA	NA	48810916	48795109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810808
transcript_74727.known	chr19	-	1272	9	FSM	ENSG00000105552.15	ENST00000545387.6	1272	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_8	74.5398383416546	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCGGGCTTCTTCAGTGA	-48809994	True	NA	0	True	AATAAA	-18	NA	48811012	48795061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48810983
transcript_74732.known	chr19	-	1563	11	FSM	ENSG00000105552.15	ENST00000316273.11	1563	11	0	0	0	0	multi-exon	TRUE	canonical	3	105	junction_10	42.6765743704904	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTCGGGCTTCTTCAGT	-48810011	True	NA	-2	True	AATAAA	-16	NA	48811029	48795063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48795465_48796427_48796503_48796577_48796719_48796936_48797023_48797190_48797334_48799674_48799839_48799980_48800101_48800186_48800298_48806516_48806718_48806999_48807075_48810983
transcript_74735.known	chr19	-	1050	9	FSM	ENSG00000087076.9	ENST00000263278.9	1050	9	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	18.2854963017141	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAGGATATCGTTATAT	-48836076	True	NA	-5	True	CATAAA	-19	NA	48836491	48813017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_74737.known	chr19	-	991	8	FSM	ENSG00000087076.9	ENST00000599157.5	991	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	42.5838907933744	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGAAGGAGGAGGATATCG	-48836095	True	NA	-11	True	CATAAA	-13	NA	48836510	48813023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48813349_48813455_48813553_48813662_48813731_48815036_48815142_48832665_48832753_48834275_48834359_48835804_48835844_48836323
transcript_74739.nic	chr19	-	1397	8	NIC	ENSG00000087076.9	novel	1050	9	NA	NA	-428	-3	combination_of_known_junctions	FALSE	canonical	3	29	junction_1	29.093094769469	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGGAGGAGGATATCGTTA	-48836927	False	NA	-8	True	CATAAA	-16	NA	48836938	48813020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48813349_48813662_48813731_48815036_48815142_48831667_48831760_48832665_48832733_48834275_48834359_48835804_48835844_48836323
transcript_74747.nic	chr19	-	1759	13	NIC	ENSG00000105559.12	novel	3073	20	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	10	junction_12	19.7587884806286	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-48859383	False	841	-13	True	ATTAAA	-15	NA	48859400	48837096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48859201
transcript_7475.known	chr1	-	1542	5	FSM	ENSG00000183291.18	ENST00000331835.10	1542	5	0	0	0	0	multi-exon	FALSE	canonical	3	1294	junction_4	47.4150556258242	3244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTCTGTGTGGTTCAAAGT	-86901827	True	NA	-5	True	ATTAAA	-21	NA	86914126	86862444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86863606_86868052_86868103_86880661_86880726_86903280_86903449_86914027
transcript_74752.nnic	chr19	-	591	2	NNC	ENSG00000105559.12	novel	2614	17	NA	NA	276	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-48838027	True	NA	-13	True	ATTAAA	-15	NA	48838038	48837096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_48837552_48837902
transcript_74753.known	chr19	-	3073	20	FSM	ENSG00000105559.12	ENST00000263265.11	3073	20	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_12	15.7929820663634	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAATAGCTTTCTTTCTGT	-48867776	True	NA	-13	True	ATTAAA	-15	NA	48868617	48837096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48837552_48838016_48838130_48839204_48839264_48841148_48841311_48845369_48845447_48845516_48845617_48847899_48848041_48852227_48852327_48853681_48853832_48854006_48854088_48854216_48854265_48857421_48857497_48858859_48859140_48859468_48859685_48860349_48860460_48861400_48861502_48861619_48861693_48865502_48865611_48867536_48867627_48868082
transcript_74754.known	chr19	+	2350	3	FSM	ENSG00000087074.8	ENST00000200453.6	2350	3	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	15.5	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGAGCAGCGTCTGTATGTG	48870603	True	NA	13	True	AATAAA	-16	NA	48872420	48876058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48872652_48873224_48874899_48875613
transcript_74757.known	chr19	+	2406	13	FSM	ENSG00000104805.16	ENST00000405315.9	2406	13	0	0	0	0	multi-exon	FALSE	canonical	3	500	junction_1	71.2546294792291	748	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTGAGAGGCTCAATCCT	48886729	True	NA	116	True	NA	NA	NA	48900311	48923372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48900373_48900785_48900932_48904346_48904455_48905752_48905886_48911148_48911253_48913010_48913197_48913473_48913565_48918725_48918785_48919029_48919123_48919193_48919287_48921153_48921325_48921826_48921933_48922317
transcript_7476.known	chr1	-	1835	6	NNC	ENSG00000183291.18	novel	1502	6	NA	NA	0	-2	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	540.167381466153	379	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTGTGGTTCAAA	-86914404	False	NA	-7	True	ATTAAA	-19	NA	86914424	86862446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_86863606_86868052_86868103_86880661_86880690_86880692_86880726_86903280_86903449_86914027
transcript_74769.known	chr19	+	1064	7	FSM	ENSG00000104808.8	ENST00000221403.7	1064	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.22597511950204	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTAGTGGTTTGGCAGAA	48933460	True	NA	10	True	AATAAA	-21	NA	48933698	48944969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48936031_48936196_48939448_48939702_48942439_48942565_48944356_48944508_48944823
transcript_7477.known	chr1	-	1785	5	NNC	ENSG00000183291.18	novel	1542	5	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	666.151775123357	312	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACCTTCTGTGTGGTTCAAA	-86914404	False	NA	-7	True	ATTAAA	-19	NA	86914424	86862446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_86863606_86880661_86880690_86880692_86880726_86903280_86903449_86914027
transcript_74770.nic	chr19	+	944	6	NIC	ENSG00000104808.8	novel	1064	7	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_4	6.61513416341649	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	NA	False	NA	9	True	AATAAA	-20	NA	48933653	48944968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48933812_48934999_48935112_48939448_48939702_48942439_48942565_48944356_48944508_48944823
transcript_74774.known	chr19	+	715	5	FSM	ENSG00000104808.8	ENST00000520557.1	715	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	5.3851648071345	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGGTAGTGGTTTGGCAGA	48933519	False	NA	9	True	AATAAA	-20	NA	48933757	48944968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48939448_48939702_48944356_48944508_48944823
transcript_74776.known	chr19	+	634	5	FSM	ENSG00000104808.8	ENST00000523250.5	634	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	9.44391338376205	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACATCTTCGTGGTAGTGG	48933463	True	NA	0	True	AATAAA	-11	NA	48933701	48944959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48933812_48934999_48935112_48942439_48942565_48944356_48944508_48944823
transcript_74778.nic	chr19	+	663	4	NIC	ENSG00000104808.8	novel	776	5	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	9.56846672960488	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTTCGTGGTAGTGGTTTG	NA	False	NA	4	True	AATAAA	-15	NA	48933653	48944963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_48933812_48934999_48935112_48939448_48939702_48944823
transcript_7478.known	chr1	-	1220	4	FSM	ENSG00000183291.18	ENST00000370554.5	1220	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	614.380085036038	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATCTGAATTTGGAATTC	-86901835	True	NA	-8	True	AATAAA	-13	NA	86914134	86862724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_86863606_86880661_86880726_86903280_86903449_86914027
transcript_74780.nic	chr19	+	851	3	ISM	ENSG00000104808.8	ENST00000520557.1	715	5	-104	4939	-45	-4930	5prime_fragment	FALSE	canonical	3	18	junction_2	2	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCTCAGTGAATCTTTG	NA	False	NA	11	True	AATAAA	-23	NA	48933653	48940029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_48933812_48934999_48935112_48939448
transcript_74784.nnic	chr19	+	769	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	144	junction_1	1236.64132229196	1168	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917969	True	NA	21	True	AATAAA	-17	NA	48954874	48961798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48954937_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_74788.nic	chr19	+	742	6	NNC	ENSG00000087088.21	novel	795	6	NA	NA	0	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	1530.0668743555	1244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917969	True	NA	21	True	AATAAA	-17	NA	48954874	48961798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48954963_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_7479.known	chr1	+	6759	7	FSM	ENSG00000153936.18	ENST00000370550.10	6759	7	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_6	19.3340517107914	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGAATGACTGTACTTT	86914603	True	NA	8	True	TATAAA	-3	NA	86914634	87109982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837_87097936_87103431_87103590_87104469
transcript_74806.known	chr19	+	383	4	FSM	ENSG00000087088.21	ENST00000506183.5	383	4	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1473.45467072003	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCAGCTGCCTTGGACTGT	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48956197_48956334_48960809_48960915_48961531
transcript_74810.known	chr19	+	458	3	FSM	ENSG00000087088.21	ENST00000539787.2	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_1	1692.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATCCCCGATTCATCTAC	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48956197_48956334_48960809
transcript_74815.known	chr19	+	795	6	FSM	ENSG00000087088.21	ENST00000345358.12	795	6	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	328.331174273781	3996	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48917969	True	NA	21	True	AATAAA	-17	NA	48954874	48961798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809_48960915_48961531
transcript_74816.known	chr19	+	687	6	NNC	ENSG00000087088.21	novel	677	7	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1590.60446371812	1270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACTTCGGCATCTGAGTCA	48918023	True	NA	18	True	AATAAA	-14	NA	48954928	48961795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_48954965_48955686_48955714_48955714_48955834_48956197_48956334_48960809_48960915_48961531
transcript_74817.known	chr19	+	1358	5	FSM	ENSG00000087088.21	ENST00000293288.12	1358	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	358.049577572715	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGGCATCTGAGTCACTG	48918023	True	NA	21	True	AATAAA	-17	NA	48954928	48961798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48955547_48955600_48955686_48955834_48956197_48956334_48960809
transcript_74818.known	chr19	+	775	5	FSM	ENSG00000087088.21	ENST00000513545.5	775	5	0	0	0	0	multi-exon	FALSE	canonical	3	2539	junction_1	365.96789476674	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGCATTTTTCTTACTTT	48917991	True	NA	-64	True	CATAAA	-39	NA	48954896	48961713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48955547_48955834_48956197_48956334_48960809_48960915_48961531
transcript_74819.known	chr19	+	433	5	FSM	ENSG00000087088.21	ENST00000354470.7	433	5	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_2	1247.1862330863	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCCAGCTGCCTTGGACT	48918023	True	NA	NA	False	NA	NA	NA	48954928	48961637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48954963_48955547_48955600_48956197_48956334_48960809_48960915_48961531
transcript_74822.known	chr19	+	871	4	FSM	ENSG00000087086.15	ENST00000331825.11	871	4	0	0	0	0	multi-exon	FALSE	canonical	3	17539	junction_2	1174.50736717807	61980	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGTGGTTTTGTGTGTGG	48866682	True	NA	14	True	AATAAA	-14	NA	48965308	48966879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48965610_48965769_48965917_48966280_48966407_48966582
transcript_74836.known	chr19	-	3569	16	FSM	ENSG00000104812.15	ENST00000323798.8	3569	16	0	0	0	0	multi-exon	TRUE	canonical	3	156	junction_10	22.4786318286698	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCAGGTGTGGTCAGACAT	-48990918	True	NA	-23	True	AATACA	-15	NA	48993309	48968129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_48969612_48969774_48969856_48970545_48970710_48970927_48971024_48974212_48974340_48974619_48974734_48977923_48978003_48978097_48978158_48981529_48981637_48982254_48982376_48982719_48982838_48985460_48985606_48985849_48986036_48987193_48987386_48991301_48991484_48992994
transcript_7484.known	chr1	+	1585	5	FSM	ENSG00000153936.18	ENST00000370551.8	1585	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_2	10.9658560997307	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTGAGTTTTCAGTTTT	86914616	False	NA	14	True	AATAAA	-33	NA	86914647	87098445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_86915161_87072933_87073173_87084193_87084280_87092530_87092670_87097837
transcript_74853.known	chr19	+	1478	15	FSM	ENSG00000183207.14	ENST00000221413.10	1478	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	483.333218390791	364	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACCCTGTGTATGTGTGG	48985347	True	NA	26	True	TATAAA	-18	NA	48993898	49015926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009872_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_74854.known	chr19	+	1853	13	FSM	ENSG00000183207.14	ENST00000594338.1	1853	13	0	0	0	0	multi-exon	FALSE	canonical	3	1495	junction_6	207.374644196333	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGACTCTGTATAAAATGGT	48990767	False	NA	-6	True	NA	NA	NA	48999318	49015894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48999374_49003278_49003335_49004276_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_74855.known	chr19	+	1563	15	FSM	ENSG00000183207.14	ENST00000596247.5	1563	15	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	482.066030916165	1279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCTGTGTATGTGTGGTTG	48985346	True	NA	29	True	TATAAA	-21	NA	48993897	49015929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_48993924_48999318_48999374_49003278_49003335_49004206_49004419_49007017_49007148_49007301_49007369_49009775_49009883_49009972_49010067_49010487_49010612_49010998_49011094_49011191_49011311_49014483_49014604_49015020_49015151_49015571_49015687_49015816
transcript_74856.known	chr19	+	715	3	FSM	ENSG00000104818.15	ENST00000359342.7	715	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	7.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGGCGGTGTCTTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	49031889	49033238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49032105_49032503_49032672_49032906
transcript_74857.known	chr19	+	775	3	FSM	ENSG00000104818.15	ENST00000474913.1	775	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCCCCAGCCTTCCAAGCC	NA	False	NA	NA	False	NA	NA	NA	49031911	49033154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49032271_49032503_49032672_49032906
transcript_74858.known	chr19	-	877	3	FSM	ENSG00000104827.12	ENST00000357383.4	877	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_2	8.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	-49024321	False	NA	NA	False	AATAAA	-17	NA	49024333	49022868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49023201_49023435_49023604_49023956
transcript_74859.known	chr19	+	877	3	FSM	ENSG00000189052.7	ENST00000301408.7	877	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	9	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	NA	False	NA	NA	False	AATAAA	-17	NA	49043847	49045311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49044225_49044576_49044745_49044979
transcript_74860.known	chr19	-	887	3	FSM	ENSG00000213030.6	ENST00000448456.4	887	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	11	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGGAGGTGTCTTTCTGT	-49049077	False	NA	NA	False	AATAAA	-17	NA	49049111	49047637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49047970_49048204_49048373_49048724
transcript_74863.nic	chr19	-	1199	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	-15	5283	-15	-5283	5prime_fragment	FALSE	canonical	2	11	junction_2	7	38	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTCATGGATTTGATCATT	-49065077	False	NA	43	True	AATACA	-17	NA	49065091	49061075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_74864.nnic	chr19	-	1214	3	NNC	ENSG00000225950.8	novel	813	4	NA	NA	19	-62	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTACTGTT	-49064888	True	NA	-9	True	NA	NA	NA	49065035	49061127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_49062010_49063615_49063863_49064950
transcript_74866.nic	chr19	-	1147	3	ISM	ENSG00000283663.1	ENST00000599795.5	1748	7	-15	5335	-15	-5335	5prime_fragment	FALSE	canonical	2	11	junction_2	7	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTACTGAGTGTTTACTGTT	-49065077	False	NA	-9	True	NA	NA	NA	49065091	49061127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_49062010_49063738_49063863_49064950
transcript_74868.nnic	chr19	+	1788	11	NNC	ENSG00000104852.15	novel	1757	11	NA	NA	-246	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	473.341156038644	1666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATAGTGGGCACCTCGGTTT	49085128	False	NA	19	True	AATAAA	-15	NA	49085172	49108602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794_49107883_49108041
transcript_74871.known	chr19	+	1671	10	FSM	ENSG00000104852.15	ENST00000598441.6	1671	10	0	0	0	0	multi-exon	FALSE	canonical	3	1178	junction_9	144.113466955815	1848	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGGGCACCTCGGTTTCT	49064743	True	NA	21	True	AATAAA	-17	NA	49085450	49108604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107794
transcript_74872.known	chr19	+	1603	10	FSM	ENSG00000104852.15	ENST00000221448.9	1603	10	0	0	0	0	multi-exon	FALSE	canonical	3	485	junction_9	345.563665499688	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCCCCTTGGATTTAAAA	49064743	True	NA	-2	True	NA	NA	NA	49085450	49108563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49085637_49086404_49086562_49090290_49090354_49090465_49090521_49098426_49098492_49098641_49098705_49101389_49101472_49104633_49104736_49107624_49107713_49107821
transcript_74874.nic	chr19	+	1254	2	ISM	ENSG00000104852.15	ENST00000597936.5	580	4	-278	3445	-246	-3445	5prime_fragment	FALSE	canonical	3	1427	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGTGGGGTTGATAGTAC	49085128	False	NA	NA	False	NA	NA	NA	49085172	49087194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49085637_49086404
transcript_74877.known	chr19	+	746	6	FSM	ENSG00000104863.12	ENST00000221459.7	746	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	3.38230690505755	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	49114067	True	NA	9	True	TTTAAA	-16	NA	49114369	49118460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118019_49118351
transcript_74878.nnic	chr19	+	822	6	NNC	ENSG00000104863.12	novel	746	6	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	13.5262707351287	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	49114064	True	NA	9	True	TTTAAA	-16	NA	49114366	49118460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_49114442_49114848_49114968_49115259_49115332_49116262_49116473_49117854_49118092_49118351
transcript_7488.known	chr1	+	538	3	FSM	ENSG00000267272.5	ENST00000589455.5	538	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGGACTGTCTGTGACAG	87131977	True	NA	NA	False	NA	NA	NA	87132054	87134192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87132260_87133613_87133719_87133964
transcript_74881.known	chr19	+	582	5	FSM	ENSG00000104863.12	ENST00000391864.7	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.3229125944742	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGTGTCTGTGTGTCTGT	49114272	False	NA	9	True	TTTAAA	-16	NA	49114323	49118460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49114442_49114848_49114968_49115259_49115332_49117854_49118019_49118351
transcript_74887.known	chr19	+	367	3	FSM	ENSG00000104863.12	ENST00000486217.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCATACTAAGGCATCTTT	49114121	False	NA	NA	False	AGTAAA	-24	NA	49114423	49115489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49114442_49114848_49114968_49115259
transcript_74892.known	chr19	-	742	1	FSM	ENSG00000221916.4	ENST00000408991.4	742	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCACGTGAACGTCCAGAT	-49118791	True	NA	-16	True	AATAAA	-35	NA	49119143	49118401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49118400_49119100
transcript_74893.known	chr19	+	799	6	FSM	ENSG00000177380.14	ENST00000602905.1	799	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	14.551975810865	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGACCAGCGGGAGTGCGC	NA	False	NA	NA	False	NA	NA	NA	49148572	49150354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49148764_49148992_49149169_49149256_49149326_49149546_49149719_49150079_49150152_49150235
transcript_74894.known	chr19	+	980	2	FSM	ENSG00000177380.14	ENST00000602783.1	980	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGCTTCCTTGTTGACT	49149448	True	NA	17	True	NA	NA	NA	49149957	49151021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49150152_49150235
transcript_74895.known	chr19	-	2357	6	FSM	ENSG00000130528.12	ENST00000252825.9	2357	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	4.02988833592198	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTGTCAGACGTGGGG	-49155065	True	NA	-6	True	AATAAA	-15	NA	49155396	49151197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49152309_49152379_49153260_49153332_49153406
transcript_74896.known	chr19	-	2044	5	FSM	ENSG00000130528.12	ENST00000595625.1	2044	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	7.15454401062709	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGACTGCGACGCAGGTG	-49155230	False	NA	-97	True	NA	NA	NA	49155243	49151288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49151333_49151516_49151554_49152003_49152059_49153260_49153332_49153406
transcript_74901.known	chr19	+	1829	2	FSM	ENSG00000130529.16	ENST00000599628.5	1829	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGAGTGCTCAAAACCTT	49157205	True	NA	NA	False	AATAAA	-19	NA	49157791	49159921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49157891_49158191
transcript_74904.known	chr19	-	2191	13	FSM	ENSG00000074219.14	ENST00000598810.5	2191	13	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	128.980914824205	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49361449	False	5819	-4	True	GATAAA	-17	NA	49361495	49340594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49361395
transcript_74905.nnic	chr19	-	2224	13	NNC	ENSG00000074219.14	novel	2175	13	NA	NA	12	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_12	129.692023013497	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356610	True	NA	-4	True	GATAAA	-17	NA	49362429	49340594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362296
transcript_74906.known	chr19	-	2175	13	FSM	ENSG00000074219.14	ENST00000593945.6	2175	13	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_12	123.832183709334	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356597	True	NA	-4	True	GATAAA	-17	NA	49362416	49340594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362332
transcript_74907.nic	chr19	-	2148	13	NIC	ENSG00000074219.14	novel	2175	13	NA	NA	12	0	combination_of_known_junctions	FALSE	canonical	3	116	junction_8	112.482189948256	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356610	True	NA	-4	True	GATAAA	-17	NA	49362429	49340594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_7491.known	chr1	+	556	3	FSM	ENSG00000267272.5	ENST00000476432.5	556	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGATCCTTTGAGGGCAAGC	87131891	True	NA	NA	False	NA	NA	NA	87131968	87134131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87132253_87133613_87133719_87133964
transcript_74912.known	chr19	-	1444	12	FSM	ENSG00000074219.14	ENST00000539846.5	1444	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_11	139.500288811573	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGACAGATCACTCCGGA	-49356622	True	NA	NA	False	GATAAA	-33	NA	49362441	49341081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49355958_49355971_49357251_49357315_49359434_49359500_49362372
transcript_74914.known	chr19	-	2167	12	FSM	ENSG00000074219.14	ENST00000601519.5	2167	12	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_11	127.820380169896	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356588	True	NA	-4	True	GATAAA	-17	NA	49362407	49340594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355302_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362328
transcript_74915.known	chr19	-	2164	12	FSM	ENSG00000074219.14	ENST00000311227.6	2164	12	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_11	87.8732182143049	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCAGGGGATTTATTTGAGG	-49356638	True	NA	-4	True	GATAAA	-17	NA	49362457	49340594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49341438_49342437_49342591_49343230_49343399_49347189_49347364_49348702_49348846_49351300_49351366_49355147_49355207_49355311_49355420_49357251_49357315_49359434_49359500_49359843_49360082_49362372
transcript_74928.nnic	chr19	+	1091	5	NIC	ENSG00000104901.7	novel	524	2	NA	NA	-160	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	6.36396103067893	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	NA	False	NA	5	True	AATAAA	-19	NA	49361622	49375116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49361907_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_74932.known	chr19	+	939	5	FSM	ENSG00000104901.7	ENST00000221498.7	939	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	4.20565096031518	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	49363714	True	NA	5	True	AATAAA	-19	NA	49363876	49375116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49364009_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_74934.known	chr19	+	775	5	FSM	ENSG00000104901.7	ENST00000596402.1	775	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.66077672302228	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGGGATGGACTCCGCAAGGG	49363714	False	NA	NA	False	NA	NA	NA	49363729	49374899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49363915_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_74936.nnic	chr19	+	938	5	NNC	ENSG00000104901.7	novel	939	5	NA	NA	54	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	7.22841614740048	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	49363825	False	NA	5	True	AATAAA	-19	NA	49363987	49375116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_49364119_49364581_49364755_49365508_49365650_49365792_49365886_49374716
transcript_7494.known	chr1	+	4993	5	FSM	ENSG00000143013.13	ENST00000370544.10	4993	5	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_1	24.9837447153144	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATTCTGTTATAAGTTCT	87327897	True	NA	9	True	AATAAA	-19	NA	87328879	87348923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87329245_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_74945.known	chr19	+	524	2	FSM	ENSG00000104901.7	ENST00000594268.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACACCATCTCCTTTCACT	49361762	False	NA	5	True	AATAAA	-19	NA	49361782	49375116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49361907_49374716
transcript_74946.known	chr19	+	319	2	FSM	ENSG00000104894.12	ENST00000600121.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACTGCTGATGCTGCCAC	NA	False	NA	NA	False	NA	NA	NA	49340594	49343335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49340861_49343282
transcript_74947.known	chr19	+	1259	8	FSM	ENSG00000104894.12	ENST00000323906.9	1259	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.494871659305393	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCTTTATCCTCTGTCAGA	NA	False	NA	12	True	AATAAA	-22	NA	49335405	49340606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49335610_49335713_49335787_49336908_49337034_49337146_49337222_49337924_49338030_49338699_49338937_49339329_49339414_49340250
transcript_74949.known	chr19	+	1849	4	FSM	ENSG00000261949.7	ENST00000610896.3	1849	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	10.1434160364686	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	49425268	True	NA	4	True	AATAAA	-16	NA	49425387	49428987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49425490_49426409_49427614_49427945_49428120_49428618
transcript_74950.nic	chr19	+	735	2	ISM	ENSG00000261949.7	ENST00000610896.3	1849	4	2366	0	2366	0	3prime_fragment	FALSE	canonical	3	29	junction_1	0	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGACCCCTCCTCTGGCC	49427634	False	NA	4	True	AATAAA	-16	NA	49427753	49428987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49428120_49428618
transcript_74953.nnic	chr19	+	902	3	Antisense	novelGene_ENSG00000104888.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACGCCTTGCTTTGCCTGCT	49432383	False	NA	NA	False	NA	NA	NA	49432509	49435519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_49432625_49433619_49433673_49434785
transcript_7496.known	chr1	+	1260	5	FSM	ENSG00000143013.13	ENST00000370542.1	1260	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	88.6746158717364	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAAAAATTTGGAAAAAA	87331277	True	NA	NA	False	AAAAAG	-11	NA	87331667	87345408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_87331815_87332012_87332252_87339535_87339633_87340046_87340203_87344787
transcript_74960.known	chr19	+	3099	17	FSM	ENSG00000161618.10	ENST00000293350.9	3099	17	0	0	0	0	multi-exon	TRUE	canonical	3	177	junction_7	25.0296698939479	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGACTTTTGTCAATTTCCAT	49449905	True	NA	12	True	AATAAA	-18	NA	49453224	49471050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49453422_49458485_49458589_49458959_49459087_49459669_49459849_49460821_49460900_49461618_49461801_49461883_49462037_49462569_49462756_49463853_49463950_49464126_49464264_49464416_49464523_49464631_49464763_49465737_49465906_49466081_49466284_49468380_49468567_49468863_49468987_49470305
transcript_74976.known	chr19	-	992	10	FSM	ENSG00000104872.11	ENST00000596049.5	992	10	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_9	302.166620702331	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGCTTCTGAGATGTGGA	-49452720	True	NA	-78	True	NA	NA	NA	49453494	49446368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484_49451579_49453392
transcript_74979.known	chr19	+	1032	9	FSM	ENSG00000090554.13	ENST00000601800.5	1032	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.52769256906871	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	49474184	False	NA	7	True	TATAAA	-17	NA	49474206	49486231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476116_49476199_49476422_49476567_49478962_49479048_49480297_49480477_49480551_49480621_49486014
transcript_74980.known	chr19	+	984	9	FSM	ENSG00000090554.13	ENST00000600429.5	984	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.82222121285516	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCACCGGCCCCATTTAC	49474213	False	NA	-73	True	NA	NA	NA	49474251	49486151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49485963
transcript_74981.known	chr19	+	1046	9	FSM	ENSG00000090554.13	ENST00000204637.6	1046	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.79583152331272	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	49474197	False	NA	7	True	TATAAA	-17	NA	49474235	49486231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474282_49474602_49474673_49475673_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49486014
transcript_74982.known	chr19	+	1034	9	FSM	ENSG00000090554.13	ENST00000596435.5	1034	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.53553390593274	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	49474189	False	NA	7	True	TATAAA	-17	NA	49474227	49486231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474282_49474602_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478962_49479048_49480297_49480477_49480551_49480621_49485963
transcript_74988.known	chr19	-	998	9	FSM	ENSG00000104872.11	ENST00000601807.5	998	9	0	0	0	0	multi-exon	FALSE	canonical	2	20	junction_8	320.768997878536	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCCGGTGCCTTCTTGAT	-49450827	False	NA	-110	True	NA	NA	NA	49451601	49446400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451367
transcript_75.known	ERCC-00157	+	1003	1	FSM	ERCC-00157A	DQ839618	1003	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	56	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00157_+_0_1000
transcript_75018.known	chr19	-	1197	9	FSM	ENSG00000104872.11	ENST00000262265.10	1197	9	0	0	0	0	multi-exon	FALSE	canonical	3	734	junction_3	92.0258115965298	5158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	-49439863	True	NA	-7	True	AATAAA	-16	NA	49451814	49446297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023_49447100_49447337_49447468_49447826_49447909_49448000_49448063_49449474_49449655_49450781_49450849_49451484
transcript_75019.known	chr19	-	424	3	FSM	ENSG00000104872.11	ENST00000595633.5	424	3	0	0	0	0	multi-exon	FALSE	canonical	3	998	junction_1	17	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTCTGACTGGGGAT	-49446403	False	NA	-7	True	AATAAA	-16	NA	49447177	49446297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49446424_49446550_49446695_49447023
transcript_75020.known	chr19	+	1076	8	FSM	ENSG00000090554.13	ENST00000594009.5	1076	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3.73073281634303	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGGCCAGGTCTGTCTA	49474522	False	NA	7	True	TATAAA	-17	NA	49474560	49486231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49474673_49475690_49475802_49476144_49476199_49476422_49476567_49478908_49479048_49480297_49480477_49480551_49480621_49485963
transcript_75021.known	chr19	+	660	8	FSM	ENSG00000142541.18	ENST00000467825.2	660	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6216.46053241074	18905	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCCTGCCCTTCCTCCA	49222962	True	NA	5	True	AATAAA	-19	NA	49487633	49491843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490601_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_75022.known	chr19	+	1342	8	FSM	ENSG00000142541.18	ENST00000679106.1	1342	8	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_7	6155.08969413583	2309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTGAATGATCCTTTATAGA	49487330	False	NA	135	True	AATATA	-25	NA	49487509	49492427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491730
transcript_75023.known	chr19	+	794	8	FSM	ENSG00000142541.18	ENST00000484279.5	794	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6445.55937313846	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGTCTGAGCCCAATAAAGA	49222936	True	NA	-31	True	AATACA	-28	NA	49487607	49491807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49490091_49490231_49490298_49490474_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_75024.known	chr19	+	850	7	FSM	ENSG00000142541.18	ENST00000479992.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	2598.50667050648	727	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGTTGCCCTGGAATGTA	49222943	True	NA	23	True	AATAAA	-37	NA	49487614	49491861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49489923_49490231_49490577_49490778_49490865_49491039_49491100_49491424_49491548_49491728
transcript_75025.known	chr19	+	2312	3	FSM	ENSG00000142541.18	ENST00000488946.1	2312	3	0	0	0	0	multi-exon	FALSE	canonical	3	11745	junction_1	3770	484	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAATCTGGCGTCTTTGCACT	49222936	True	NA	13	True	AATAAA	-13	NA	49487607	49492305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49487645_49489849_49491548_49491728
transcript_7503.nnic	chr1	+	1216	4	NNC	ENSG00000143013.13	novel	4993	5	NA	NA	3363	170	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	105.28163288163	593	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTAATGGTGTTTGGGTT	87335114	False	NA	6	True	AATAAA	-17	NA	87335143	87345578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_87335316_87339535_87339633_87340046_87340203_87344787
transcript_75038.known	chr19	+	575	5	FSM	ENSG00000142534.7	ENST00000594493.1	575	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3811.76933982108	4757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49438925	True	NA	39	True	AATAAA	-19	NA	49496433	49499689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497172_49497326_49497519_49497596_49497916_49498047_49499511
transcript_75039.known	chr19	+	547	5	FSM	ENSG00000142534.7	ENST00000601306.1	547	5	0	0	0	0	multi-exon	FALSE	canonical	1	92	junction_1	3772.09179368689	2217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGACTTGGGATCTTC	49438957	True	NA	38	True	AATAAA	-18	NA	49496465	49499688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496498_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_7504.known	chr1	+	6070	22	FSM	ENSG00000065243.20	ENST00000370521.8	6070	22	0	0	0	0	multi-exon	FALSE	canonical	2	86	junction_12	20.060565890694	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTATAGTAATCTTACTTA	88679529	True	NA	NA	False	AATAAA	-15	NA	88684272	88836255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496_88805672_88805890_88806018_88807312_88807444_88807528_88807605_88807683_88807776_88813556_88813734_88821940_88822004_88824309_88824387_88828480_88828624_88832743_88832852_88833076_88833158_88833244
transcript_75048.known	chr19	+	573	5	FSM	ENSG00000142534.7	ENST00000270625.7	573	5	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1515.85635863033	37436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCGCCTTTACCAGAGCATT	49438925	True	NA	58	True	AATAAA	-38	NA	49496433	49499708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916_49498047_49499511
transcript_75049.known	chr19	+	1133	3	FSM	ENSG00000142534.7	ENST00000599167.5	1133	3	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1802.5	573	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49496266	False	NA	39	True	AATAAA	-19	NA	49496369	49499689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49498047_49499511
transcript_75050.known	chr19	+	944	4	FSM	ENSG00000142534.7	ENST00000600027.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1554.78122791172	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49496261	False	NA	39	True	AATAAA	-19	NA	49496364	49499689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49498047_49499511
transcript_75051.known	chr19	+	751	4	FSM	ENSG00000142534.7	ENST00000602252.5	751	4	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1738.3533076513	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49438922	True	NA	39	True	AATAAA	-19	NA	49496430	49499689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497596_49497916_49498047_49499511
transcript_75052.known	chr19	+	430	5	FSM	ENSG00000142534.7	ENST00000599561.1	430	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3702.83462363633	954	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCAGACTTGGGATCTTCC	49438945	True	NA	39	True	AATAAA	-19	NA	49496453	49499689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497283_49497580_49497596_49497916_49498047_49499511
transcript_75053.known	chr19	+	583	4	FSM	ENSG00000142534.7	ENST00000596873.1	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	5356	junction_1	1605.4553525056	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATTTTGGAATGTTCTC	49438923	True	NA	NA	False	NA	NA	NA	49496431	49498251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49496472_49497193_49497326_49497519_49497596_49497916
transcript_75068.nnic	chr19	+	1928	4	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	16	0	intron_retention	FALSE	canonical	1	4	junction_1	87.3765796232988	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512815	False	NA	28	True	AATATA	-20	NA	49513212	49526333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49513474_49514210_49514487_49524506_49525574_49526009
transcript_7507.known	chr1	+	2632	11	FSM	ENSG00000065243.20	ENST00000316005.11	2632	11	0	0	0	0	multi-exon	TRUE	canonical	3	127	junction_10	14.4013888219158	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCATTCTCCTATCTCAG	88679478	True	NA	NA	False	NA	NA	NA	88684221	88806268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_88684629_88740987_88741289_88760221_88760377_88770351_88770470_88771420_88771567_88771662_88771880_88784638_88784825_88786103_88786214_88804390_88804535_88804845_88804922_88805496
transcript_75071.nic	chr19	+	1545	3	NIC	ENSG00000104870.13	novel	383	2	NA	NA	-45	0	intron_retention	FALSE	canonical	2	7	junction_1	105.5	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49506740	False	NA	28	True	AATATA	-20	NA	49506770	49526333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49506925_49524506_49525574_49526009
transcript_75078.nic	chr19	+	1660	3	NIC	ENSG00000104870.13	novel	1559	6	NA	NA	8	0	intron_retention	FALSE	canonical	3	12	junction_1	103	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49512807	False	NA	28	True	AATATA	-20	NA	49513204	49526333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49513474_49524506_49525574_49526009
transcript_75080.known	chr19	+	660	3	FSM	ENSG00000104870.13	ENST00000599988.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	109	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTGTGTTCTCATCATTT	49511385	True	NA	28	True	AATATA	-20	NA	49513254	49526333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49513474_49525456_49525574_49526009
transcript_75083.known	chr19	+	582	2	FSM	ENSG00000104870.13	ENST00000593431.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGCCAGTCCTCCCTGAG	49512413	True	NA	NA	False	NA	NA	NA	49513397	49525012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49513474_49524506
transcript_75084.known	chr19	+	1351	5	FSM	ENSG00000104870.13	ENST00000452439.1	1351	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	43.6892435274405	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGACTGACTTCCCACTGCT	49512410	True	NA	NA	False	NA	NA	NA	49513394	49525164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49513474_49513881_49514134_49514210_49514487_49516113_49516200_49524506
transcript_75088.known	chr19	+	1469	7	FSM	ENSG00000142552.8	ENST00000270645.8	1469	7	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	11.7709623886731	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGTGTGTCTGTCTGTTG	49526849	True	NA	14	True	AATAAA	-15	NA	49528002	49543633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49528059_49528466_49528715_49534192_49534396_49537032_49537206_49539118_49539180_49542552_49542753_49543105
transcript_7510.nic	chr1	-	1556	7	NIC	ENSG00000137947.12	novel	1599	7	NA	NA	-3	292	combination_of_known_junctions	FALSE	canonical	3	16	junction_6	48.9069411115528	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTTTGTTATATGTTACAT	-88891928	False	NA	-1	True	AATAAA	-19	NA	88891947	88852931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891606
transcript_75105.known	chr19	+	1403	7	FSM	ENSG00000126460.11	ENST00000246794.10	1403	7	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_1	3.07769755210323	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCGGGCGCATCGGAACTG	49581305	False	NA	9	True	AAAAAG	-40	NA	49581315	49591004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49581482_49583206_49583305_49583541_49583718_49583912_49583953_49588496_49588633_49589899_49590053_49590370
transcript_75111.known	chr19	-	1000	9	FSM	ENSG00000142546.14	ENST00000339093.7	1000	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_4	197.393483935007	5799	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-49574839	True	NA	-2	True	AATAAA	-18	NA	49580558	49555710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557080_49557250_49558896_49558979_49559933_49560040_49560621_49560693_49580514
transcript_75112.known	chr19	-	865	4	FSM	ENSG00000142546.14	ENST00000596477.1	865	4	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_3	65.4946986828366	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCGCAACGACGTGGCGCCT	-49557209	False	NA	-9	True	AATAAA	-11	NA	49557295	49555717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556994_49557089
transcript_75113.known	chr19	-	2615	8	FSM	ENSG00000142546.14	ENST00000598820.5	2615	8	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_7	99.6915651560618	2203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGACGTGGCGCCTTCATTCG	-49574816	True	NA	-2	True	AATAAA	-18	NA	49580535	49555710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49555823_49556316_49556426_49556548_49556737_49556874_49556994_49557089_49558979_49559933_49560040_49560621_49560693_49580514
transcript_75114.known	chr19	-	986	6	FSM	ENSG00000126458.4	ENST00000246792.4	986	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_2	26.0415053328336	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-49638942	True	NA	-22	True	AATAAA	-18	NA	49640143	49635291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49639945
transcript_75115.nnic	chr19	-	1165	6	NNC	ENSG00000126458.4	novel	986	6	NA	NA	1956	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	125.13736452395	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTGCTTTCTAAAAAGG	-49636965	False	1201	-22	True	AATAAA	-18	NA	49638166	49635291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_49635661_49635733_49635853_49636618_49636728_49636823_49636927_49637042_49637131_49637789
transcript_75122.known	chr19	+	4222	11	FSM	ENSG00000126461.15	ENST00000360565.8	4222	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	48.2136910016232	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGAGCCCCATGGTTCT	49635443	True	NA	18	True	ATTAAA	-18	NA	49642208	49658642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49642243_49645020_49645135_49645353_49645412_49646107_49646203_49646525_49646627_49646714_49646831_49650867_49653706_49654348_49654432_49654651_49654871_49657760_49657890_49658207
transcript_75128.known	chr19	-	1468	8	FSM	ENSG00000126456.16	ENST00000598808.5	1468	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	182.418558848174	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGCCTCCAACCCCCCTG	-49659642	True	NA	-93	True	NA	NA	NA	49665842	49659631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664552_49664674_49665630
transcript_75137.known	chr19	-	1741	8	FSM	ENSG00000126456.16	ENST00000597198.5	1741	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	152.067519912192	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCACTTGTGCGTGTCTGGT	-49665842	False	NA	-34	True	AATAAA	-16	NA	49665857	49659572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665483
transcript_75138.known	chr19	-	1556	8	FSM	ENSG00000126456.16	ENST00000601291.5	1556	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	153.398374256345	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49659602	True	NA	-33	True	AATAAA	-17	NA	49665802	49659571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660845_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_75139.nic	chr19	-	1557	8	NIC	ENSG00000126456.16	novel	1595	8	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	62	junction_7	134.901475763853	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49665845	False	NA	-33	True	AATAAA	-17	NA	49665860	49659571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665671
transcript_7514.known	chr1	-	1599	7	FSM	ENSG00000137947.12	ENST00000370500.10	1599	7	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_6	12.2576506721313	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTTAGTGAGCTTATTG	-88890585	True	NA	1	True	ATTAAA	-18	NA	88891567	88852632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88853347_88857205_88857488_88859881_88860012_88860139_88860287_88863980_88864115_88887260_88887368_88891482
transcript_75147.known	chr19	-	1494	8	FSM	ENSG00000126456.16	ENST00000593922.5	1494	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_7	186.161987833945	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664442_49664674_49665630
transcript_75148.known	chr19	-	1442	7	FSM	ENSG00000126456.16	ENST00000377135.8	1442	7	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_6	153.880906331271	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTTGTGCGTGTCTGGTGTT	-49665860	False	NA	-31	True	AATAAA	-19	NA	49665875	49659569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_7515.known	chr1	-	516	3	FSM	ENSG00000137947.12	ENST00000471471.1	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	61	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGTTGGAGATTCTCAGAA	-88891925	False	NA	NA	False	NA	NA	NA	88891944	88864043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88864115_88887260_88887368_88891606
transcript_75159.known	chr19	-	1055	7	FSM	ENSG00000126456.16	ENST00000599223.5	1055	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	171.975450444404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49664673_49664847_49665630
transcript_75162.known	chr19	-	1117	6	FSM	ENSG00000126456.16	ENST00000599144.5	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	177.720454647179	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665716	False	NA	-40	True	AATAAA	-10	NA	49665731	49659578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661947_49662329_49662424_49662618_49663187_49663259_49665630
transcript_75166.known	chr19	-	882	6	FSM	ENSG00000126456.16	ENST00000600022.5	882	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	213.952892011302	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_75169.known	chr19	-	710	5	FSM	ENSG00000126456.16	ENST00000596765.5	710	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	237.181760470741	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTATGATCACTTGTGCGTG	-49665690	False	NA	-40	True	AATAAA	-10	NA	49665705	49659578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49662424_49662618_49663187_49663259_49665630
transcript_75174.known	chr19	-	823	5	FSM	ENSG00000126456.16	ENST00000596822.5	823	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	192.034502108345	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCACTTGTGCGTGTCTGGTG	-49665740	False	NA	-33	True	AATAAA	-17	NA	49665755	49659571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49662424_49662618_49663187_49663259_49663342_49663515_49665630
transcript_75179.known	chr19	-	550	2	FSM	ENSG00000126456.16	ENST00000596644.5	550	2	0	0	0	0	multi-exon	FALSE	canonical	3	545	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-49660988	False	NA	-36	True	AATAAA	-14	NA	49661003	49659574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712
transcript_75180.known	chr19	-	2874	7	FSM	ENSG00000126456.16	ENST00000597636.5	2874	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	158.711915816747	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATCACTTGTGCGTGTCTG	-49665842	False	NA	-36	True	AATAAA	-14	NA	49665857	49659574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49659834_49660712_49660829_49661449_49662329_49662424_49662618_49663187_49663259_49663342_49663515_49664673
transcript_75181.known	chr19	+	620	5	FSM	ENSG00000126453.10	ENST00000594157.5	620	5	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_4	478.772584323706	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650869	True	NA	29	True	AATAAA	-39	NA	49665960	49673916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49673697
transcript_75182.known	chr19	+	893	6	FSM	ENSG00000126453.10	ENST00000598979.5	893	6	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_2	324.58157680312	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650869	True	NA	29	True	AATAAA	-39	NA	49665960	49673916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49668850_49668938_49669023_49669116_49670215_49670489_49673697
transcript_75183.known	chr19	+	633	5	FSM	ENSG00000126453.10	ENST00000600947.5	633	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	410.100292611454	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650907	True	NA	29	True	AATAAA	-39	NA	49665998	49673916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667162_49668850_49668938_49673697
transcript_75184.known	chr19	+	510	5	FSM	ENSG00000126453.10	ENST00000598306.2	510	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	449.444379206148	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAATTGTCTGTTCTTACA	49650921	True	NA	29	True	AATAAA	-39	NA	49666012	49673916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49666068_49666684_49666800_49667018_49667088_49670436_49670489_49673697
transcript_7521.known	chr1	-	4799	2	FSM	ENSG00000213516.10	ENST00000321792.5	4799	2	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	0	454	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTCGTAAATACTTTTC	-88985218	True	NA	-8	True	ATTAAA	-16	NA	88992772	88979455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88984067_88992584
transcript_75245.known	chr19	+	1393	10	FSM	ENSG00000126457.22	ENST00000391851.8	1393	10	0	0	0	0	multi-exon	FALSE	canonical	3	4049	junction_1	318.550226673252	28737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49677062	False	NA	27	True	AATAAA	-13	NA	49677151	49688447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49677317_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_75246.known	chr19	+	1686	11	FSM	ENSG00000126457.22	ENST00000532489.5	1686	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	1916.40330828351	3669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49675703	False	NA	27	True	AATAAA	-13	NA	49675896	49688447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49676261_49676345_49676440_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_75247.known	chr19	+	1328	11	FSM	ENSG00000126457.22	ENST00000454376.7	1328	11	0	0	0	0	multi-exon	FALSE	canonical	3	362	junction_2	1809.36580325815	5459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTGGCTTTGTTTCCTGGG	49613080	True	NA	27	True	AATAAA	-13	NA	49677270	49688447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49677317_49679871_49679926_49680486_49680589_49681909_49682066_49682195_49682260_49683926_49684070_49684753_49684842_49684921_49685038_49686092_49686244_49686604_49686727_49688161
transcript_75248.known	chr19	+	866	4	FSM	ENSG00000126457.22	ENST00000530361.5	866	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2281.62666144622	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACGCCAATAAATCCT	49685183	False	NA	-1	True	NA	NA	NA	49685304	49688419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49685640_49686092_49686244_49686604_49686727_49688161
transcript_75254.known	chr19	+	2846	20	FSM	ENSG00000169169.15	ENST00000598293.6	2846	20	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	51.3381597663906	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686198	True	NA	21	True	AATAAA	-16	NA	49691115	49713731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_75255.known	chr19	+	2785	20	FSM	ENSG00000169169.15	ENST00000405931.6	2785	20	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_8	73.6492774335363	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686226	True	NA	21	True	AATAAA	-16	NA	49691143	49713731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705039_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_75260.known	chr19	+	2783	19	FSM	ENSG00000169169.15	ENST00000323446.9	2783	19	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	55.0860157916914	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49686192	True	NA	21	True	AATAAA	-16	NA	49691109	49713731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709_49704788_49705006_49705115_49705213_49705299_49705908_49706105_49706230_49706414_49707517_49707624_49708722_49708840_49710319_49710485_49710722_49710858_49711808_49711962_49712735_49712850_49712971_49713065_49713419
transcript_7527.known	chr1	-	1868	13	FSM	ENSG00000137944.18	ENST00000370491.7	1868	13	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_12	20.0499376557634	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATGTTTCCACCATTGTG	-88985222	True	NA	0	True	AATAAA	-23	NA	88992776	88935772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88992584
transcript_7528.known	chr1	-	1815	14	FSM	ENSG00000137944.18	ENST00000260508.9	1815	14	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_12	57.794780788498	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTTTCATGTTTCCACC	-88985075	True	NA	-6	True	AATAAA	-17	NA	88992629	88935778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_88936246_88943004_88943092_88943349_88943424_88949090_88949278_88953062_88953153_88955148_88955226_88961166_88961288_88961380_88961507_88962058_88962146_88964828_88964979_88968669_88968815_88969408_88969468_88988251_88988352_88992584
transcript_75304.known	chr19	+	1027	4	FSM	ENSG00000169169.15	ENST00000600944.5	1027	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	44.0983748755741	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTAGGGAGGCTGAGGCA	49686230	True	NA	NA	False	AATACA	-42	NA	49691147	49697935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325
transcript_75308.nic	chr19	+	1156	3	ISM	ENSG00000169169.15	ENST00000323446.9	2783	19	-29	15665	-29	131	5prime_fragment	FALSE	canonical	3	117	junction_1	72	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGGTGTGAGCTTTGCT	49690959	False	NA	NA	False	NA	NA	NA	49691080	49698066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49691341_49692238_49692394_49697325
transcript_75311.known	chr19	+	700	3	FSM	ENSG00000169169.15	ENST00000599937.5	700	3	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	19.5	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTGGTGTCTGCTATGCT	49712543	False	NA	21	True	AATAAA	-16	NA	49712554	49713731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49712850_49712971_49713065_49713419
transcript_75312.known	chr19	+	1059	8	FSM	ENSG00000169169.15	ENST00000598396.5	1059	8	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	39.4782295986649	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGAAGGGGAGGGGTGAG	49686218	True	NA	NA	False	NA	NA	NA	49691135	49704787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49691341_49691820_49691890_49692238_49692394_49697325_49697466_49700683_49700856_49701316_49701419_49701496_49701635_49704709
transcript_75315.nnic	chr19	-	837	6	NNC	ENSG00000126467.11	novel	1854	11	NA	NA	1065	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	1.16619037896906	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGAATTCTGTCTGCTTT	-49746284	True	NA	-5	True	AATAAA	-16	NA	49746313	49739759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_49739933_49740058_49740184_49741884_49742021_49744230_49744405_49745201_49745397_49746279
transcript_75321.known	chr19	+	3357	23	FSM	ENSG00000196961.13	ENST00000354293.10	3357	23	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_18	123.128804425848	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	49759610	True	NA	9	True	AATAAA	-17	NA	49767000	49807114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49767201_49781756_49781826_49781946_49782090_49782530_49782725_49791934_49792065_49792990_49793093_49795629_49795739_49798801_49798953_49799326_49799496_49799628_49799767_49799967_49800151_49800960_49801059_49801389_49801622_49801721_49801890_49801980_49802142_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_75338.known	chr19	-	1728	11	FSM	ENSG00000010361.14	ENST00000313777.9	1728	11	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_9	37.4112282610448	398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGTGTCTTCTCTGTCA	-49810696	True	NA	0	True	AATAAA	-41	NA	49813292	49806865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49812995
transcript_75339.known	chr19	-	1524	11	FSM	ENSG00000010361.14	ENST00000533418.5	1524	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_10	68.855210405604	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	-49810653	True	NA	-24	True	AATAAA	-17	NA	49813249	49806889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812614_49812737_49813132
transcript_75340.known	chr19	-	1632	11	FSM	ENSG00000010361.14	ENST00000377092.8	1632	11	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	64.6285540608793	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGAACAAAAATAAAAATACA	-49810677	True	NA	-54	True	NA	NA	NA	49813273	49806919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812250_49812336_49812637_49812737_49812995
transcript_7535.nnic	chr1	+	950	3	NNC	ENSG00000225492.6	novel	1234	5	NA	NA	7772	-3297	intron_retention	FALSE	canonical	3	7	junction_1	0.5	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATTGGAATAGTTTCAT	NA	False	NA	NA	False	AATAAA	-18	NA	89418090	89421637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_89418356_89420190_89420319_89421080
transcript_75355.known	chr19	-	1483	10	FSM	ENSG00000010361.14	ENST00000525370.5	1483	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	88.7306925616449	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGAAAGTCCCAGGCATC	-49810560	True	NA	-27	True	AATAAA	-14	NA	49813156	49806892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808492_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812614_49812737_49812995
transcript_7536.nnic	chr1	+	1238	3	NNC	ENSG00000225492.6	novel	1234	5	NA	NA	7772	-3009	intron_retention	FALSE	canonical	3	7	junction_1	0.5	19	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAGAATTA	NA	False	NA	NA	False	NA	NA	NA	89418090	89421925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_89418356_89420190_89420319_89421080
transcript_75366.nic	chr19	+	1460	9	ISM	ENSG00000196961.13	ENST00000359032.9	3286	24	35116	-4	-272	0	3prime_fragment	FALSE	canonical	0	0	junction_4	224.231709120276	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCATGTCTGTGTCCATC	49802200	True	NA	9	True	AATAAA	-17	NA	49802249	49807114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_49802600_49802948_49803006_49803106_49803190_49803286_49803377_49805452_49805577_49805660_49805778_49805871_49805942_49806118_49806254_49806680
transcript_7538.known	chr1	-	439	2	FSM	ENSG00000231999.8	ENST00000528692.1	439	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTTGGGCTTTACATTG	-89632721	False	NA	NA	False	AATGAA	-23	NA	89632761	89631875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89632210_89632656
transcript_7539.known	chr1	-	1305	3	FSM	ENSG00000231999.8	ENST00000526694.3	1323	3	7	11	-2	-11	multi-exon	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCCTAAAGAATGTGAC	-89632876	True	NA	NA	False	ATTAAA	-14	NA	89632916	89625975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89626827_89632015_89632210_89632656
transcript_75390.known	chr19	+	520	2	FSM	ENSG00000269194.1	ENST00000600669.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCATACGAAGTCACATCC	49808916	False	NA	NA	False	NA	NA	NA	49808932	49809738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49809027_49809312
transcript_75392.known	chr19	-	679	4	FSM	ENSG00000010361.14	ENST00000529634.2	679	4	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_3	15.9652400197707	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCCCAGGCATCCCCCAAAC	-49806043	False	NA	-19	True	AATAAA	-22	NA	49808639	49806884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808114_49808160_49808413_49808492_49808573
transcript_75393.known	chr19	-	1479	10	FSM	ENSG00000010361.14	ENST00000528094.5	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_8	67.5224699682801	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAAGTCCCAGGCATCCCC	-49810579	True	NA	-24	True	AATAAA	-17	NA	49813175	49806889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49807375_49808413_49808489_49808573_49808639_49808716_49808824_49809162_49809259_49809377_49809576_49811362_49811468_49811630_49811700_49812637_49812737_49812995
transcript_75394.known	chr19	-	540	3	FSM	ENSG00000010361.14	ENST00000534138.1	540	3	0	0	0	0	multi-exon	FALSE	canonical	3	245	junction_1	8.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCACAGGTGAGGACTATC	-49806229	False	2596	NA	False	AATGAA	-19	NA	49808825	49808122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49808489_49808573_49808639_49808716
transcript_75395.known	chr19	+	2332	18	FSM	ENSG00000104973.19	ENST00000312865.10	2332	18	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_7	25.1605227114658	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCCCGGCTCCCGTCACTG	49812004	True	NA	17	True	AATAAA	-17	NA	49818288	49836979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_7540.known	chr1	-	695	1	FSM	ENSG00000272931.1	ENST00000609194.1	695	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	41	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTCATATCTTCTTTT	-89820843	False	265	-16	True	AATAAA	-18	NA	89820868	89820173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_89820200_89820900
transcript_75401.known	chr19	-	1731	17	FSM	ENSG00000039650.12	ENST00000322344.8	1731	17	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_16	33.4682685539602	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863856	True	NA	-1	True	AATAAA	-17	NA	49867576	49861203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_75407.known	chr19	-	1665	16	FSM	ENSG00000039650.12	ENST00000596014.5	1665	16	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_11	24.4834638072312	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCACAATAAACGCTGTTTC	-49867249	False	NA	-28	True	NA	NA	NA	49867286	49861230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053
transcript_75408.known	chr19	-	1723	16	FSM	ENSG00000039650.12	ENST00000593946.5	1723	16	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_15	67.6438385138579	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863625	False	3720	-1	True	AATAAA	-17	NA	49867234	49861203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49861771_49861882_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866529_49867053
transcript_75413.known	chr19	-	1600	16	FSM	ENSG00000039650.12	ENST00000600910.5	1600	16	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_3	64.2470924547476	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGCCGGCATTTTGCTG	-49863835	True	NA	-1	True	AATAAA	-17	NA	49867555	49861203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49861366_49861448_49861511_49861607_49861696_49862043_49862106_49862184_49862282_49862370_49862464_49862537_49862609_49862689_49862739_49863688_49863761_49863963_49864072_49864178_49864237_49864323_49864404_49865126_49865427_49866398_49866446_49867053_49867218_49867468
transcript_75427.known	chr19	+	1623	13	FSM	ENSG00000104973.19	ENST00000538643.5	1623	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	81.5402082138349	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTCCTTTTTAACACACGC	49812057	True	NA	0	True	NA	NA	NA	49818341	49836962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49818476_49818570_49818617_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49836846
transcript_75428.known	chr19	+	1413	13	FSM	ENSG00000104960.15	ENST00000601638.5	1413	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	434.706861638456	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCCCAATAAAGCCTTTT	49850815	False	NA	0	True	NA	NA	NA	49850827	49860713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860565
transcript_75429.known	chr19	+	1480	13	FSM	ENSG00000104960.15	ENST00000601612.5	1480	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	454.967054668064	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49850718	False	NA	27	True	AATAAA	-15	NA	49850734	49860740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49850956_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857908_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_75433.nic	chr19	+	1410	13	NIC	ENSG00000104960.15	novel	1438	13	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	113	junction_1	322.733410366306	964	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGCCTTCTCTGCTCAC	49850889	True	NA	27	True	AATAAA	-15	NA	49850950	49860740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_49851097_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_75438.known	chr19	+	1438	13	FSM	ENSG00000104960.15	ENST00000598325.5	1438	13	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	333.947382332407	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCTTTTAAAAACCTGCCT	49849158	True	NA	12	True	NA	NA	NA	49851019	49860725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49851209_49854405_49854544_49854651_49854735_49854830_49854889_49854969_49855078_49856974_49857131_49857692_49857783_49857903_49857978_49858056_49858115_49858548_49858654_49859985_49860184_49860267_49860337_49860613
transcript_75443.known	chr19	+	1742	13	FSM	ENSG00000104946.14	ENST00000599049.6	1742	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	86.7487992231977	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCTGGGTGTGGTGGTTCAT	49876511	False	NA	NA	False	AAAAAG	-4	NA	49878186	49885534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49878242_49878497_49878573_49880278_49880403_49881267_49881476_49882040_49882153_49882241_49882401_49882763_49882893_49882972_49883077_49883650_49883746_49884252_49884370_49884458_49884560_49884658_49884759_49885171
transcript_75456.known	chr19	-	645	3	FSM	ENSG00000039650.12	ENST00000595792.1	645	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	77.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCGGGAGGCTGAAGCGGGA	-49863841	True	NA	NA	False	NA	NA	NA	49867561	49866140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49866529_49867053_49867218_49867468
transcript_75457.known	chr19	-	752	3	FSM	ENSG00000039650.12	ENST00000626274.2	752	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_2	34.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGTGGGTACCTGTCCAAG	-49863844	True	NA	NA	False	AGTAAA	-25	NA	49867564	49865953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49866446_49867053_49867218_49867468
transcript_7546.known	chr1	+	9729	12	FSM	ENSG00000162664.17	ENST00000340281.9	9729	12	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	32.8074774786541	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTGTTCCTGTCTGAAAAA	89989079	True	NA	15	True	AATAAA	-16	NA	89995109	90035533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_75463.known	chr19	-	619	2	FSM	ENSG00000039650.12	ENST00000629088.1	619	2	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAAAGAAAAGAAAAAA	-49867193	False	3720	NA	False	NA	NA	NA	49867258	49866031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49866446_49867053
transcript_75468.known	chr19	+	4003	18	FSM	ENSG00000104973.19	ENST00000593767.3	4003	18	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_17	61.3403912492895	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGCCGTCGACTTTT	49812004	True	NA	3	True	AGTAAA	-17	NA	49818288	49840383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49818476_49818570_49818617_49819171_49819297_49828448_49828548_49828969_49829091_49829785_49829949_49830087_49830219_49830510_49830599_49830693_49830888_49831332_49831462_49831935_49832022_49832099_49832158_49832307_49832416_49834985_49835178_49835533_49835606_49835726_49835946_49836225_49836407_49838579
transcript_75474.known	chr19	+	2007	3	FSM	ENSG00000169136.13	ENST00000423777.7	2007	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGCATCTTGTCTTTGA	49927544	True	NA	11	True	AATAAA	-19	NA	49929204	49933935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49929401_49930731_49931029_49932421
transcript_75476.known	chr19	+	722	3	FSM	ENSG00000169136.13	ENST00000596658.1	722	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCACCACCACCACTACCAC	49930090	True	NA	NA	False	NA	NA	NA	49930218	49932632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49930433_49930731_49931029_49932421
transcript_75480.known	chr19	-	2053	3	FSM	ENSG00000213024.12	ENST00000597029.5	2053	3	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	27.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGCTGTGTGCTTTGCGTTT	-49918160	True	NA	-1	True	NA	NA	NA	49929443	49908104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49909885_49927693_49927849_49929325
transcript_75482.known	chr19	+	180	2	FSM	ENSG00000169136.13	ENST00000600336.1	682	2	179	323	174	-323	multi-exon	FALSE	canonical	2	11	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGGGATGGCTCGTAG	49929383	False	NA	NA	False	GGGGCT	-31	NA	49929395	49930906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_49929401_49930731
transcript_75484.known	chr19	-	3479	2	FSM	ENSG00000213024.12	ENST00000422090.2	3479	2	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	0	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTGCTGTTAATATGGAT	-49929216	False	NA	-1	True	AATAAA	-19	NA	49929744	49906824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49909885_49929325
transcript_7549.known	chr1	+	9433	12	FSM	ENSG00000162664.17	ENST00000370447.3	9433	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	65.9684372313291	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTGTGTTCCTGTCTGAAA	89989106	True	NA	13	True	AATAAA	-14	NA	89995136	90035531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007611_90007751_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_75490.known	chr19	-	1923	15	FSM	ENSG00000105053.11	ENST00000316763.8	1923	15	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_14	48.4951081059119	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	-50022535	True	NA	-6	True	AATAAA	-14	NA	50025372	49976467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_75491.known	chr19	-	2126	15	FSM	ENSG00000105053.11	ENST00000599538.5	2126	15	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_14	28.6616432871245	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAAAAAAATGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	50025946	49976759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_75493.known	chr19	-	1749	14	FSM	ENSG00000105053.11	ENST00000377011.6	1749	14	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_13	60.6331485099104	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTAATAAATTGTTTTAC	-50022535	True	NA	-30	True	NA	NA	NA	50025372	49976491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025266
transcript_75494.nic	chr19	-	1920	14	NIC	ENSG00000105053.11	novel	1923	15	NA	NA	-159	0	combination_of_known_junctions	FALSE	canonical	3	55	junction_11	46.423570834158	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAGGAGTCAGTTATCT	NA	False	NA	-6	True	AATAAA	-14	NA	50025598	49976467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_49976785_49979082_49979243_49980954_49981014_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50016023_50016164_50020584_50020648_50025345
transcript_755.known	chr1	-	1397	10	FSM	ENSG00000279457.4	ENST00000623083.4	1397	10	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_4	84.9253848248821	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGCTCCATGACACCTTCC	-195329	False	NA	NA	False	NA	NA	NA	195411	185216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_185351_185490_185560_186316_186470_187128_187288_187375_187578_187754_187891_188129_188267_188438_188585_188790_188903_195262
transcript_75500.known	chr19	-	1831	13	FSM	ENSG00000105053.11	ENST00000594092.5	1831	13	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_12	65.0608155668389	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCTTTCCTCATCATCAAA	-50022490	True	NA	-14	True	AATAAA	-19	NA	50025327	49981699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49982189_49988371_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025266
transcript_75510.known	chr19	-	1979	12	FSM	ENSG00000105053.11	ENST00000593919.5	1979	12	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_11	30.5505948055878	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCATTGTGTGTGGGAAAC	-50022535	True	NA	NA	False	NA	NA	NA	50025372	49987700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_49988493_49989638_49989772_49992859_49992953_49994813_49994920_49995190_49995276_49997503_49997571_50000789_50000855_50007568_50007827_50009235_50009386_50016023_50016164_50020584_50020648_50025345
transcript_75518.known	chr19	+	4642	5	FSM	ENSG00000142528.16	ENST00000270617.8	4642	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	15.4656878282215	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTGGTTCCTTCTCTCAG	50025208	True	NA	13	True	ATTAAA	-16	NA	50026004	50048776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50026123_50030891_50031092_50039160_50039288_50041729_50041820_50044669
transcript_75519.known	chr19	+	2833	4	FSM	ENSG00000142528.16	ENST00000445728.7	2833	4	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_1	26.7124606795322	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGAAAGTTTGTGCGCAT	50025208	True	NA	2	True	AATAAA	-16	NA	50026004	50047167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50026123_50039160_50039288_50041729_50041820_50044669
transcript_75521.known	chr19	+	1525	3	FSM	ENSG00000204666.3	ENST00000527209.1	1525	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTCATTTGTTTCTTCTT	NA	False	NA	NA	False	AATAAA	-17	NA	50050588	50066793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50051195_50061799_50062000_50066074
transcript_75524.known	chr19	-	818	8	FSM	ENSG00000161652.13	ENST00000600293.5	818	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.512612465478	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCAATGTCTCTGTCCATTT	-50162870	True	NA	-1	True	AATAAA	-25	NA	50163156	50152548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50152652_50153676_50153807_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_75525.nnic	chr19	-	726	7	NNC	ENSG00000161652.13	novel	814	7	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6.93821943216622	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-50162936	True	NA	0	True	AATAAA	-26	NA	50163222	50152547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_50152652_50154599_50154698_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_75527.known	chr19	-	728	7	FSM	ENSG00000161652.13	ENST00000293405.8	814	7	86	0	-15	0	multi-exon	FALSE	canonical	0	0	junction_3	8.83176086632785	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-50162909	True	NA	0	True	AATAAA	-26	NA	50163195	50152547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50152652_50154599_50154727_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_75530.nnic	chr19	-	628	6	NIC	ENSG00000161652.13	novel	814	7	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	7.01427116670007	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAATGTCTCTGTCCATTTC	-50162936	True	NA	0	True	AATAAA	-26	NA	50163222	50152547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_50152652_50158267_50158349_50159229_50159251_50159493_50159581_50162738_50162814_50162962
transcript_75532.nnic	chr19	+	1656	7	NNC	ENSG00000105357.20	novel	6137	42	NA	NA	7798	0	intron_retention	FALSE	canonical	3	8	junction_1	29.3919868142473	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	50291669	True	NA	8	True	AATAAA	-17	NA	50292561	50310540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_50292613_50293232_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_75534.nic	chr19	+	2219	6	ISM	ENSG00000105357.20	ENST00000595016.1	4039	10	7855	-1	7855	0	3prime_fragment	FALSE	canonical	3	71	junction_3	9.70360757656656	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATCTCTGTGGCTGTGTGT	50291726	True	NA	8	True	AATAAA	-17	NA	50292618	50310540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_50293322_50293563_50293688_50301660_50301870_50307048_50307158_50309004_50309178_50309639
transcript_75539.nic	chr19	+	1905	10	NIC	ENSG00000131408.15	novel	2380	14	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_5	142.848793406797	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAACAGGAAAATAAAATATG	50371177	True	NA	-24	True	AATAAA	-13	NA	50376431	50382979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378313_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_75541.known	chr19	+	2416	10	FSM	ENSG00000131408.15	ENST00000253727.10	2416	10	0	0	0	0	multi-exon	FALSE	canonical	3	356	junction_5	54.2445309298778	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTAGGCACAATTCT	50371202	True	NA	NA	False	AATAAA	-18	NA	50376456	50383388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_75542.known	chr19	+	1915	10	FSM	ENSG00000131408.15	ENST00000598168.5	1915	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	146.534789195073	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAACAGGAAAATAAAATAT	50371203	True	NA	-25	True	AATAAA	-12	NA	50376457	50382978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379091_50379182_50379779_50379880_50381965_50382175_50382455
transcript_75543.known	chr19	+	1830	10	FSM	ENSG00000131408.15	ENST00000599105.5	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	140.420004905917	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCTTTTATTTAATAAAAAC	50371218	True	NA	15	True	NA	NA	NA	50376472	50382950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50376577_50376718_50376827_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379133_50379182_50379779_50379880_50381965_50382175_50382455
transcript_75553.known	chr19	+	1828	9	FSM	ENSG00000131408.15	ENST00000593926.5	1828	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	155.058809407915	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTCTGCTTTTATTTAAT	50377233	False	NA	9	True	NA	NA	NA	50377244	50382944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50377329_50377586_50377649_50377732_50377871_50378148_50378440_50378521_50378797_50379001_50379182_50379779_50379880_50381965_50382175_50382455
transcript_75554.known	chr19	+	3524	28	FSM	ENSG00000062822.16	ENST00000601098.6	3524	28	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	200.755985480999	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGGGACCAGGGAGAATT	50369512	True	NA	-25	True	NA	NA	NA	50384341	50417971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50395024_50395151_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_75555.known	chr19	+	3341	27	FSM	ENSG00000062822.16	ENST00000613923.6	3341	27	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	201.611455513031	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGACCAGGGAGAATTAATA	50369504	True	NA	-21	True	NA	NA	NA	50384333	50417975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50398847_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409595_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_75556.known	chr19	+	3436	27	FSM	ENSG00000062822.16	ENST00000440232.7	3436	27	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	96.4756767948158	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGGTGCTTTGTGGTCTCT	50369517	True	NA	18	True	AATAAA	-18	NA	50384346	50418014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50384391_50398850_50399054_50399370_50399485_50401777_50401925_50401998_50402125_50402204_50402374_50402453_50402536_50402611_50402742_50403052_50403220_50403492_50403598_50406181_50406323_50406406_50406518_50406982_50407175_50407326_50407416_50408784_50408902_50409121_50409236_50409518_50409667_50413425_50413522_50413741_50413880_50414814_50414991_50415437_50415591_50415723_50415827_50416395_50416529_50416609_50416724_50417044_50417098_50417171_50417270_50417841
transcript_75558.known	chr19	+	3792	6	FSM	ENSG00000269404.7	ENST00000595883.6	3792	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	13.0629246342463	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGGCGTATGCCTGTA	50418537	True	NA	NA	False	AATAAA	-13	NA	50418937	50431314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_75560.known	chr19	+	564	6	FSM	ENSG00000269404.7	ENST00000597855.5	564	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	26.2495714250728	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCGCCGGCGTCTTCCAG	50418540	True	NA	NA	False	GGGGCT	-45	NA	50418940	50428124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423639_50423756_50428037
transcript_75562.known	chr19	+	847	5	FSM	ENSG00000269404.7	ENST00000596074.5	847	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	25.2289516230857	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGGTGACAGGACCTATGGA	50418540	True	NA	NA	False	NA	NA	NA	50418940	50428587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50423604_50423756_50428037
transcript_75565.nic	chr19	+	1592	5	ISM	ENSG00000269404.7	ENST00000595883.6	3792	6	837	2323	817	2	3prime_fragment	FALSE	canonical	3	59	junction_4	4.9180788932265	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCCTTTTGTCATGTCTGA	50419374	False	NA	20	True	NA	NA	NA	50419774	50428991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_50419974_50422472_50422546_50422822_50423038_50423604_50423756_50428037
transcript_75566.known	chr19	+	521	4	FSM	ENSG00000269404.7	ENST00000594188.1	521	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	16.779617264871	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTGTCTCAAAAAAAAAAAAA	50418540	True	NA	NA	False	NA	NA	NA	50418940	50423197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822
transcript_75569.known	chr19	+	578	3	FSM	ENSG00000269404.7	ENST00000599923.5	578	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	17	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCCTGGAGGCCCCGGGG	50418538	True	NA	NA	False	NA	NA	NA	50418938	50422975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472
transcript_75572.known	chr19	+	1443	6	FSM	ENSG00000269404.7	ENST00000270632.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	26.7985074211233	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGATCCTTTTGTCATGTCT	50418557	False	NA	18	True	NA	NA	NA	50418957	50428989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50418986_50419945_50419974_50422472_50422546_50422822_50423038_50423604_50423752_50428037
transcript_75573.known	chr19	+	3604	28	FSM	ENSG00000086967.10	ENST00000357701.6	3604	28	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	3.40337926152893	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGAGTGTCTGTCCTTC	50432800	True	NA	8	True	AAAACA	-13	NA	50432891	50466321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50432973_50435160_50435251_50435775_50435863_50436011_50436161_50436616_50436735_50437472_50437522_50437658_50437719_50440879_50441077_50442180_50442314_50443493_50443619_50443710_50443817_50445879_50446053_50448224_50448391_50450828_50450936_50451279_50451310_50451863_50452004_50454019_50454180_50454264_50454370_50455107_50455297_50455509_50455645_50458586_50458755_50458917_50459007_50459110_50459307_50460039_50460180_50461541_50461702_50461899_50462037_50464345_50464533_50466194
transcript_75575.known	chr19	+	2014	8	FSM	ENSG00000161671.17	ENST00000376918.7	2014	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_6	33.8640740343521	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	50467561	True	NA	31	True	ATTAAA	-23	NA	50476498	50483351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_75577.known	chr19	+	2178	8	FSM	ENSG00000161671.17	ENST00000601780.5	2178	8	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	36.3424752899975	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAGCCTCCTGCATTGTAT	NA	False	NA	31	True	ATTAAA	-23	NA	50476399	50483351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50476724_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50481860_50481948_50482148
transcript_75579.known	chr19	+	9439	7	FSM	ENSG00000161671.17	ENST00000334976.11	9439	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.3749298538977	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCATTGATACACTGATATT	50467569	True	NA	4	True	AATAAA	-16	NA	50476506	50490871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_50476659_50477928_50478002_50478956_50479067_50480110_50480216_50480580_50480763_50480883_50480978_50482148
transcript_75589.known	chr19	-	653	5	FSM	ENSG00000142530.11	ENST00000602178.5	653	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	23.0271578793389	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50475584	True	NA	NA	False	AATAAA	-22	NA	50476271	50466787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50466956_50467621_50467733_50475324_50475456_50475832_50475934_50476129
transcript_75591.known	chr19	-	1225	5	FSM	ENSG00000142530.11	ENST00000595790.5	1225	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	6.67083203206317	563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476727	False	NA	NA	False	AATAAA	-22	NA	50476746	50466787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50466956_50467621_50467830_50475324_50475456_50475832_50475934_50476129
transcript_75593.known	chr19	-	1375	5	FSM	ENSG00000142530.11	ENST00000600100.6	1375	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	11.0538454847171	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGCAGGCCACGAGCGGTT	-50476719	True	NA	NA	False	AATAAA	-22	NA	50476848	50466787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50466956_50467621_50467830_50475324_50475504_50475832_50475934_50476129
transcript_756.nnic	chr1	+	799	2	NNC	ENSG00000286448.1	novel	736	2	NA	NA	-99	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAGACTCACCTTGGTTGT	NA	False	NA	NA	False	AATAGA	-14	NA	266755	268655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_267057_268157
transcript_7560.known	chr1	+	1956	10	FSM	ENSG00000162664.17	ENST00000394583.7	1956	10	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_3	64.0381830542442	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCTCCCTGGATTAGCAG	89989081	True	NA	8	True	AATAAA	-17	NA	89995111	90028226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005093_90010087_90010287_90013125_90013238_90017316_90017465_90018684_90018785_90020791_90020923_90022249_90022346_90027353
transcript_75601.known	chr19	-	582	5	FSM	ENSG00000161677.12	ENST00000594350.1	582	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.7571399440685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGCTGGCCCAGGGCCTGTG	-50511081	False	NA	NA	False	NA	NA	NA	50511159	50506256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511074
transcript_75602.known	chr19	-	802	5	FSM	ENSG00000161677.12	ENST00000601423.5	802	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	7.08431365765238	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCTGGCCTGTGTCTGACG	-50511084	False	NA	0	True	AATAAA	-18	NA	50511162	50505997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50506273_50506377_50506573_50507573_50507700_50510285_50510446_50511116
transcript_75604.known	chr19	-	733	4	FSM	ENSG00000161677.12	ENST00000595669.5	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	8.64098759787715	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	-50511105	True	NA	-4	True	AATAAA	-14	NA	50511220	50506001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50506273_50506377_50506573_50510285_50510449_50511116
transcript_75606.nnic	chr19	-	587	3	NIC	ENSG00000161677.12	novel	733	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	11.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTGCCTGGCCTGTGTCT	-50511159	False	NA	-4	True	AATAAA	-14	NA	50511237	50506001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_50506273_50506377_50506573_50511116
transcript_75610.nnic	chr19	-	383	5	Fusion	ENSG00000167747.16_ENSG00000261341.7	novel	380	5	NA	NA	10	0	multi-exon	FALSE	canonical	2	10	junction_2	504.463266749919	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTGCTCCGCCGACCCA	-50781989	True	NA	NA	False	GATAAA	-17	NA	50804659	50785727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_50785824_50785941_50786002_50789617_50789716_50802216_50802258_50804571
transcript_75615.known	chr19	-	971	5	FSM	ENSG00000167747.16	ENST00000597493.6	1570	5	0	599	0	17	multi-exon	FALSE	canonical	3	24	junction_4	1073.84391323879	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGGTGGATAAGTGGGC	-50781950	True	NA	NA	False	NA	NA	NA	50804620	50798302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50804571
transcript_7562.nic	chr1	+	1060	7	ISM	ENSG00000162664.17	ENST00000340281.9	9729	12	-13	22323	-13	6761	5prime_fragment	TRUE	canonical	3	138	junction_4	26.1262958211327	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTGAGAAATACGGAGATG	89989066	True	NA	NA	False	NA	NA	NA	89995096	90013210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132_90005245_90007344_90007751_90010087_90010287_90013125
transcript_75629.known	chr19	-	1718	4	FSM	ENSG00000167747.16	ENST00000641834.2	1735	4	0	17	0	0	multi-exon	FALSE	canonical	3	1177	junction_3	481.072644087033	4243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50804569	True	NA	-18	True	CATAAA	-19	NA	50804929	50797703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50804571
transcript_75630.known	chr19	-	1844	5	FSM	ENSG00000167747.16	ENST00000598463.5	1844	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	1078.93037310106	973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCGTTTTTATAAGGATTG	-50803515	False	NA	-18	True	CATAAA	-19	NA	50803875	50797703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50798959_50799293_50799358_50802216_50802258_50802453_50802615_50803552
transcript_75631.known	chr19	-	1639	2	FSM	ENSG00000167747.16	ENST00000596655.1	1639	2	0	0	0	0	multi-exon	FALSE	canonical	3	2282	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGGCCAAGCAGGGCAAC	-50801898	False	NA	-75	True	NA	NA	NA	50802258	50797760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50799358_50802216
transcript_75632.known	chr19	-	292	2	FSM	ENSG00000167747.16	ENST00000602125.1	292	2	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCAACATGGTGAAACC	-50781924	True	NA	NA	False	NA	NA	NA	50804594	50801988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50802258_50804571
transcript_75636.known	chr19	-	912	3	FSM	ENSG00000167748.11	ENST00000596300.1	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	1	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAATAAGCCTTCTGTCGCC	-50820574	False	NA	NA	False	GGGGCT	-19	NA	50820849	50819270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50819350_50819898_50820036_50820153
transcript_75639.known	chr19	-	481	3	FSM	ENSG00000167749.12	ENST00000431178.2	481	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGGGGACTGGGAACCCA	-50909305	False	NA	NA	False	NA	NA	NA	50909328	50906933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50907087_50908578_50908830_50909251
transcript_75640.known	chr19	-	1429	7	FSM	ENSG00000167755.15	ENST00000310157.7	1429	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	2.5603819159562	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	NA	False	NA	1	True	AATAAA	-19	NA	50969591	50958630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540_50968592_50969489
transcript_75642.known	chr19	-	1513	6	FSM	ENSG00000167754.13	ENST00000336334.8	1513	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	3.03315017762062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-50952978	True	NA	-4	True	AATAAA	-14	NA	50953038	50943302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952746
transcript_75643.known	chr19	-	1365	6	FSM	ENSG00000167754.13	ENST00000593428.5	1365	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.03315017762062	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCCTGTGTCTCCTCCCT	-50953033	True	NA	-4	True	AATAAA	-14	NA	50953093	50943302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50943787_50948639_50948774_50948858_50949116_50949854_50950117_50952584_50952669_50952949
transcript_75644.known	chr19	-	1708	6	FSM	ENSG00000167755.15	ENST00000376851.7	1708	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_5	2.28035085019828	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGGGCTTTTTGCTTTGAT	-50968949	True	NA	1	True	AATAAA	-19	NA	50968972	50958630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50959317_50961743_50961881_50963301_50963550_50967168_50967326_50968064_50968113_50968540
transcript_75645.known	chr19	-	1955	6	FSM	ENSG00000169035.12	ENST00000595820.6	1955	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.93907194296653	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGGAGAGAGGTGACCTT	NA	False	NA	NA	False	AATAAA	-28	NA	50983917	50976467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50977692_50979787_50979925_50980239_50980488_50981766_50981915_50982326_50982458_50983850
transcript_75651.known	chr19	-	1051	6	FSM	ENSG00000129455.15	ENST00000391806.6	1051	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	11.443775600736	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGCCTGTCTCTGTTTTGGC	-51001570	False	NA	1	True	AATAAA	-20	NA	51001604	50996006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51000423_51000719_51001097_51001176_51001531
transcript_75652.known	chr19	-	853	5	FSM	ENSG00000129455.15	ENST00000291726.11	853	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	11.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	-51001668	True	NA	0	True	AATAAA	-19	NA	51001702	50996007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_50997750_50997885_50999995_51000259_51001097_51001176_51001531
transcript_75657.known	chr19	-	555	4	FSM	ENSG00000129455.15	ENST00000347619.8	555	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	11.8977121983832	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTGCCTGTCTCTGTTTTG	-51001634	True	NA	-1	True	AATAAA	-18	NA	51001668	50996008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_50997750_50997885_51001097_51001176_51001531
transcript_75659.known	chr19	-	1388	5	FSM	ENSG00000269741.5	ENST00000599166.5	1388	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	14.0712472794703	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTCCTTGCCTGTC	NA	False	NA	-10	True	AATAAA	-9	NA	51003829	50996017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_50997750_50997885_51001097_51001176_51002407_51003261_51003703
transcript_7566.known	chr1	+	1538	4	FSM	ENSG00000162664.17	ENST00000361911.9	1538	4	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_3	6.97614984548545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTAATCCATGCTTTG	89989103	True	NA	NA	False	TATAAA	-25	NA	89995133	90006449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_89995274_89998109_89998155_90005002_90005039_90005132
transcript_75661.known	chr19	-	456	3	FSM	ENSG00000129455.15	ENST00000320838.9	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	3	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGCCTGTCTCTGTTTTGG	-51001668	True	NA	0	True	AATAAA	-19	NA	51001702	50996007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_51001097_51001176_51001531
transcript_75662.known	chr19	-	267	2	FSM	ENSG00000129455.15	ENST00000593490.1	267	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTGGTTCCTTGCCTGTC	-51000949	True	NA	-10	True	AATAAA	-9	NA	51001167	50996017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_50996215_51001097
transcript_75664.known	chr19	-	2984	6	FSM	ENSG00000129451.12	ENST00000358789.8	2984	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_5	14.0939703419583	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGTTTACTTGATAATG	-51019668	True	NA	NA	False	NA	NA	NA	51019709	51012738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109_51017291_51019042_51019140_51019626
transcript_75667.nic	chr19	-	1557	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1280	-245	-247	245	3prime_fragment	FALSE	canonical	3	28	junction_2	6.48074069840786	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACGTCCCGGTGAAAGCGT	-51017528	False	NA	1	True	ACTAAA	-24	NA	51017569	51014264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_75668.nic	chr19	-	1221	4	ISM	ENSG00000129451.12	ENST00000601467.1	1428	5	1542	-171	15	171	3prime_fragment	FALSE	canonical	3	28	junction_2	6.48074069840786	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGATTGTCATGTAAGGC	-51016953	True	NA	0	True	NA	NA	NA	51017307	51014338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51014953_51015416_51015551_51015881_51016157_51017109
transcript_75670.known	chr19	-	1176	6	FSM	ENSG00000167757.14	ENST00000453757.8	1176	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.4	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATCTACTGAGTGCTTA	NA	False	NA	NA	False	AATAAA	-15	NA	51026616	51022235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51022698_51023091_51023229_51024044_51024311_51024637_51024795_51025591_51025667_51026537
transcript_75672.nnic	chr19	-	2027	6	NNC	ENSG00000167759.13	novel	1820	5	NA	NA	-716	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.47839648885823	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	-51065710	False	NA	-3	True	AATAAA	-20	NA	51065830	51055625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015_51065107_51065637
transcript_75674.nnic	chr19	-	1066	6	NNC	ENSG00000167759.13	novel	1820	5	NA	NA	-716	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	9.47839648885823	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAGAAATGTACCGGC	-51065710	False	NA	-24	True	NA	NA	NA	51065830	51056586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015_51065107_51065637
transcript_75682.known	chr19	-	1820	5	FSM	ENSG00000167759.13	ENST00000595793.6	1820	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	5.11737237261468	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTATTTGCATGGTTCCC	-51064955	True	NA	-3	True	AATAAA	-20	NA	51065092	51055625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51056776_51058537_51058675_51059824_51060094_51060432_51060620_51065015
transcript_75683.known	chr19	-	615	5	FSM	ENSG00000167759.13	ENST00000595547.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5593560409714	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTTGAGAAATGTACCGGC	-51064930	True	NA	-24	True	NA	NA	NA	51065067	51056586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51056776_51058537_51058675_51060043_51060094_51060432_51060620_51065015
transcript_75686.nnic	chr19	-	964	3	NNC	ENSG00000269072.1	novel	1763	5	NA	NA	-29	6448	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCACTTGCTTGCTGAGTT	-51181920	True	NA	NA	False	AATAAA	-21	NA	51181995	51146474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_51146864_51165220_51165274_51181473
transcript_75688.known	chr19	+	1462	7	FSM	ENSG00000105383.15	ENST00000262262.5	1462	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.897527467855751	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGGTGCAGTGAGAGTT	51225067	True	NA	NA	False	AATAAA	-21	NA	51225079	51240016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51225156_51225217_51225599_51225802_51226082_51226308_51226357_51235156_51235254_51235594_51235677_51239517
transcript_75689.known	chr19	+	3347	8	FSM	ENSG00000142549.10	ENST00000270642.9	3347	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	9.8685234509546	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCATTGGATTTTCTATC	NA	False	NA	8	True	AATAAA	-23	NA	51311643	51330891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51311927_51322063_51322143_51323661_51323895_51325345_51325466_51326763_51326899_51327079_51327201_51327731_51327887_51328670
transcript_75690.nic	chr19	-	2265	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	548	5	548	0	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATGGAGGCGGCTGGTTTC	-51338468	True	NA	-40	True	AATAAA	-14	NA	51339207	51331540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_75691.nic	chr19	-	2116	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	548	154	548	-149	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGGTGCCAGTGAAGA	-51338468	True	NA	-2	True	AATAAA	-20	NA	51339207	51331689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_75692.nic	chr19	-	1988	6	ISM	ENSG00000186806.6	ENST00000600663.1	2297	7	548	282	548	-277	3prime_fragment	FALSE	canonical	0	0	junction_1	39.7441819641567	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGGCCTGAGACTCTCT	-51338468	True	NA	-11	True	CATAAA	-13	NA	51339207	51331817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887
transcript_75697.known	chr19	-	2297	7	FSM	ENSG00000186806.6	ENST00000600663.1	2297	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	46.4901423242964	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGGCGGCTGGTTTCAGGCT	-51339592	True	NA	-35	True	AATAAA	-19	NA	51339755	51331535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51332641_51333790_51333946_51334190_51334305_51337237_51337535_51337929_51338209_51338887_51339143_51339663
transcript_757.known	chr1	+	372	1	FSM	ENSG00000225972.1	ENST00000416931.1	372	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	227	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATATGTCTGATAAAAGA	NA	False	NA	NA	False	NA	NA	NA	629061	629433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_629100_629400
transcript_75706.known	chr19	-	417	3	FSM	ENSG00000160318.6	ENST00000593841.1	417	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGCTGCGGCTCCGCGTGCT	-51367848	False	NA	-3	True	AATAAA	-17	NA	51367977	51367099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51367398_51367549_51367577_51367885
transcript_75708.known	chr19	-	872	6	FSM	ENSG00000105379.10	ENST00000309244.9	872	6	0	0	0	0	multi-exon	FALSE	canonical	3	729	junction_5	16.1938259839977	7165	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCTGTTAACTTATTTCCT	-51356720	True	NA	-20	True	AATAAA	-19	NA	51366388	51345168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51345382_51346899_51347059_51350328_51350392_51353131_51353291_51354149_51354309_51366269
transcript_75709.known	chr19	-	1335	2	FSM	ENSG00000262874.2	ENST00000574814.2	1335	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTGCGTGTGTGCGCGCGC	-51390216	True	NA	-22	True	AATAAA	-19	NA	51390591	51388288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51389510_51390477
transcript_7571.nnic	chr1	+	1211	3	NNC	ENSG00000287406.1	novel	968	6	NA	NA	-22683	244	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	24	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTTTATTTTTTGGTA	90219393	False	NA	28	True	AGTAAA	-22	NA	90219404	90284432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_90219859_90281560_90281691_90283805
transcript_75710.nnic	chr19	+	468	3	FSM	ENSG00000268889.2	ENST00000687249.1	435	3	-34	1	-20	-1	multi-exon	FALSE	canonical	0	0	junction_2	1.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGGTTGTTCTTGTTTTT	51393723	True	NA	NA	False	NA	NA	NA	51394467	51403400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51394596_51402277_51402417_51403199
transcript_75711.known	chr19	+	559	2	FSM	ENSG00000268889.2	ENST00000600765.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATCAGGATCAGTGGCA	51393743	True	NA	NA	False	NA	NA	NA	51394487	51403650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51394596_51403199
transcript_75712.known	chr19	+	729	3	FSM	ENSG00000255441.1	ENST00000532688.1	729	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_2	1	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACTCGTATCCAGAATCT	NA	False	NA	NA	False	NA	NA	NA	51415905	51417425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51416133_51416522_51416731_51417131
transcript_75713.known	chr19	+	6552	5	FSM	ENSG00000105497.8	ENST00000262259.7	6552	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	2.1650635094611	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCGTTATCAAGTGTGAAG	51571002	True	NA	4	True	AATAAA	-20	NA	51571282	51592510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51571476_51573149_51573402_51581390_51581518_51581786_51581883_51586626
transcript_75715.known	chr19	+	1239	2	FSM	ENSG00000105497.8	ENST00000545217.5	1239	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATTGTGAGATTATATAT	51571017	True	NA	NA	False	AATAAA	-26	NA	51571297	51574210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51571476_51573149
transcript_75718.nic	chr19	+	781	6	ISM	ENSG00000182310.15	ENST00000573266.5	1960	8	9183	0	-9	0	3prime_fragment	FALSE	canonical	3	12	junction_1	6.08604962188118	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	NA	False	NA	8	True	AATAAA	-19	NA	51702526	51705190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_51702653_51703020_51703099_51703227_51703336_51704029_51704187_51704269_51704481_51705089
transcript_7572.known	chr1	-	5238	3	FSM	ENSG00000233593.11	ENST00000659034.2	5247	3	9	0	1	0	multi-exon	FALSE	canonical	2	6	junction_1	1	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGATATACCTTCAAAACCT	-90851296	True	NA	NA	False	AAAAAG	-39	NA	90851657	90778450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90783424_90789397_90789488_90851482
transcript_75721.known	chr19	+	759	6	FSM	ENSG00000182310.15	ENST00000572160.5	759	6	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	6.08604962188118	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAACTCTAGATTG	51702498	True	NA	-7	True	AATAAA	-4	NA	51702535	51705175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51702653_51703020_51703099_51703227_51703338_51704029_51704187_51704269_51704481_51705089
transcript_75725.known	chr19	+	342	2	FSM	ENSG00000182310.15	ENST00000572609.1	342	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTGTTTCATCTCCGAAG	51704276	True	NA	7	True	AATAAA	-18	NA	51704334	51705189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51704577_51705089
transcript_75726.known	chr19	+	660	4	FSM	ENSG00000182310.15	ENST00000573151.5	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.64997911442	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51703082	False	NA	8	True	AATAAA	-19	NA	51703144	51705190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51703336_51704029_51704187_51704269_51704481_51705089
transcript_75727.known	chr19	+	500	3	FSM	ENSG00000182310.15	ENST00000576975.1	500	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	6.5	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTGTTTCATCTCCGAAGG	51703977	True	NA	8	True	AATAAA	-19	NA	51703998	51705190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51704187_51704269_51704481_51705089
transcript_75731.nic	chr19	-	954	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_7	57.1385712678451	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTCCATTCTTTGT	-51887444	True	NA	1	True	NA	NA	NA	51887951	51855801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887831
transcript_75732.nic	chr19	-	972	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	2	2	junction_7	57.5591975664167	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTCCATTCTTTGT	-51887474	True	NA	1	True	NA	NA	NA	51887981	51855801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887843
transcript_75733.nic	chr19	-	909	8	NIC	ENSG00000161551.15	novel	1865	7	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_7	57.9852197916479	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGGTTCCATTCTTTGT	-51887463	True	NA	1	True	NA	NA	NA	51887970	51855801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887895
transcript_75735.known	chr19	-	1865	7	FSM	ENSG00000161551.15	ENST00000640955.1	1865	7	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_6	49.5067335487473	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCCATGATGTGGTTCCA	-51887444	True	NA	-7	True	AAAAAG	-41	NA	51887951	51855809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51855968_51860903_51860979_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_75738.known	chr19	-	7308	7	FSM	ENSG00000161551.15	ENST00000301399.12	7308	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	65.5500233070558	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-51887444	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820_51886913_51887895
transcript_75739.known	chr19	-	8291	6	FSM	ENSG00000161551.15	ENST00000638348.2	8291	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	59.1283350010805	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAAGTTGTTTCTGATTCT	-51887444	True	NA	NA	False	AATAAA	-22	NA	51887951	51867047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51873707_51877281_51877378_51878388_51878516_51880322_51880402_51880678_51880878_51886820
transcript_7574.known	chr1	-	1114	3	FSM	ENSG00000233593.11	ENST00000669273.1	1114	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGCTCTCAACATTTTCC	-90851292	True	NA	NA	False	AATAAA	-38	NA	90851653	90782512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90783424_90789397_90789488_90851540
transcript_75741.known	chr19	+	1938	2	FSM	ENSG00000171049.9	ENST00000340023.7	1938	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCTTGTGTTTTCTTT	NA	False	NA	NA	False	ATTAAA	-30	NA	51761179	51770531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51761231_51768644
transcript_75743.known	chr19	-	3192	5	FSM	ENSG00000198093.11	ENST00000354957.8	3192	5	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	28.2699044922334	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATATCTCTATTTCCTGTG	-51898639	True	NA	-9	True	AATAAA	-15	NA	51905017	51889234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51891898_51896471_51896568_51896851_51896979_51900092_51900295_51904913
transcript_75744.known	chr19	-	561	3	FSM	ENSG00000198093.11	ENST00000597882.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_1	12.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGGAAGAGGCATAATCTT	-51898639	True	NA	NA	False	NA	NA	NA	51905017	51896723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51896979_51900092_51900295_51904913
transcript_7575.known	chr1	-	2996	3	FSM	ENSG00000233593.11	ENST00000443802.2	2996	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	1	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTAAAGCATGAGATGGATT	-90851297	True	NA	NA	False	AAGAAA	-13	NA	90851658	90829592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90832197_90837549_90837766_90851482
transcript_75752.known	chr19	+	3165	6	FSM	ENSG00000176024.18	ENST00000293471.11	3165	6	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	18.4108663565841	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAATTGGCCATGCTCTTAA	51926304	True	NA	NA	False	TATAAA	-41	NA	51927471	51946621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51927541_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_75755.nnic	chr19	+	2326	6	NNC	ENSG00000176024.18	novel	3165	6	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	46.6133028222631	28	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTGAATGTGGTAGTGCTTT	51926253	True	NA	9	True	AATAAA	-15	NA	51927420	51945752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_51927520_51929731_51929897_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_75757.known	chr19	+	542	5	FSM	ENSG00000176024.18	ENST00000600853.1	542	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.8162382557533	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTCTGAAGAGAGTGGA	51926306	True	NA	NA	False	AAGAAA	-37	NA	51927473	51944165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51927541_51936027_51936236_51940208_51940336_51940616_51940710_51944118
transcript_7576.known	chr1	-	2467	2	FSM	ENSG00000233593.11	ENST00000670437.1	2467	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGTTGTCATGCTCTGTGT	NA	False	NA	NA	False	ATTAAA	-22	NA	90836174	90830078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90832197_90835825
transcript_75762.known	chr19	+	701	3	FSM	ENSG00000269235.3	ENST00000595010.3	738	3	37	0	12	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTTGTCTCCTGTCTTT	51949126	True	NA	NA	False	AATATA	-1	NA	51949158	51981367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_51949236_51976390_51976574_51980926
transcript_75767.known	chr19	-	1601	2	FSM	ENSG00000256683.7	ENST00000597555.1	1601	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	-51986273	True	NA	NA	False	NA	NA	NA	51986805	51972966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51974532_51986769
transcript_75768.known	chr19	-	4020	6	FSM	ENSG00000197619.15	ENST00000594083.5	4020	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	6.46838465151849	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGCTTTGTGTGAGCACAA	-52007213	True	NA	-3	True	AATAAA	-24	NA	52008196	51991333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51994838_52000345_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_75770.known	chr19	-	704	5	FSM	ENSG00000197619.15	ENST00000597747.5	704	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	6.75925291729789	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTGAGTTATTTCACT	-52007180	True	NA	NA	False	AATACA	-16	NA	52008163	52000124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52000379_52001812_52001909_52002154_52002282_52003696_52003901_52008140
transcript_75771.known	chr19	-	535	5	FSM	ENSG00000197619.15	ENST00000599115.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.6776695296637	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCAAGATTGTGATACGTT	-52007218	True	NA	NA	False	NA	NA	NA	52008201	51994706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_51994838_52000258_52000379_52001812_52001909_52002154_52002282_52008140
transcript_75775.known	chr19	-	1293	6	FSM	ENSG00000142556.19	ENST00000356322.10	1293	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.6972034919412	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGTCTCTTTTATTC	-52026030	True	NA	NA	False	AATATA	-1	NA	52028349	52012764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52013253_52017116_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_75776.nic	chr19	-	825	2	ISM	ENSG00000142556.19	ENST00000595189.5	1031	6	-87	8319	-45	-6927	5prime_fragment	FALSE	canonical	3	126	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGACTCAATATGAAAGAAT	-52026105	True	NA	NA	False	AAAAAG	-14	NA	52028424	52025319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52025962_52028241
transcript_75777.known	chr19	-	4628	5	FSM	ENSG00000142556.19	ENST00000270649.11	4628	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_1	12.3970762682174	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGCTTTTGCTTTTGC	-52026060	True	NA	-5	True	AATAAA	-17	NA	52028379	52013323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52017360_52018007_52018104_52018367_52018495_52025730_52025962_52028241
transcript_75778.nnic	chr19	-	916	5	NNC	ENSG00000256087.7	novel	624	4	NA	NA	-2	878	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.75961064797157	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTTTTGTGTCCGGCTT	-52048820	False	NA	NA	False	TATAAA	-18	NA	52048840	52039485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52039826_52040487_52040584_52041479_52041607_52046853_52047061_52048694
transcript_7578.known	chr1	-	2292	2	FSM	ENSG00000233593.11	ENST00000655784.1	2292	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTCATGCTCTGTGTAAT	-90851292	True	NA	NA	False	ATTAAA	-25	NA	90851653	90830075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90832197_90851482
transcript_75782.nnic	chr19	-	897	3	Fusion	ENSG00000197608.12_ENSG00000260160.1	novel	675	2	NA	NA	-2	0	multi-exon	TRUE	canonical	0	0	junction_1	1.5	14	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGATTGATTACTGAC	-52093951	True	NA	-3	True	ATTAAA	-14	NA	52095767	52058489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_52059094_52093871_52093972_52095574
transcript_75786.known	chr19	+	748	1	FSM	ENSG00000275055.1	ENST00000614138.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTCCTTTTTGCCATGTAA	52048947	False	NA	NA	False	AATAAA	-16	NA	52049006	52049754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52049000_52049800
transcript_75790.known	chr19	-	612	2	FSM	ENSG00000196267.14	ENST00000599618.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGCCTCGGATAGTTCTT	NA	False	NA	NA	False	ATTAAA	-16	NA	52154964	52153863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52154133_52154621
transcript_75791.known	chr19	+	294	1	FSM	ENSG00000243680.1	ENST00000492641.1	294	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	644	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTCTATGATTAGTCAT	52143012	False	NA	-55	True	NA	NA	NA	52143042	52143336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52143000_52143300
transcript_75792.known	chr19	-	4356	4	FSM	ENSG00000204611.7	ENST00000600228.6	4356	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	8.04155872120988	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGTTTCTGTTTTTTT	-52137541	True	NA	-24	True	ATTAAA	-1	NA	52139938	52113090	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52117025_52123922_52124050_52130500_52130589_52139731
transcript_75793.known	chr19	-	808	4	FSM	ENSG00000196267.14	ENST00000597065.1	808	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.49443825784929	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCCTTTCATTTCCCAT	-52170757	True	NA	0	True	AATAAA	-19	NA	52171643	52160320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52160592_52168057_52168153_52169647_52169782_52171335
transcript_75799.known	chr19	+	5352	15	FSM	ENSG00000105568.18	ENST00000322088.11	5352	15	0	0	0	0	multi-exon	FALSE	canonical	3	2849	junction_4	174.225296904992	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCAGGCCTTCCCCGCTCTCT	52153322	True	NA	NA	False	AATAAA	-26	NA	52190051	52229518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259_52211493_52212685_52212834_52212954_52213111_52215778_52215894_52216003_52216075_52216528_52216664_52219690_52219865_52220188_52220250_52220978_52221134_52222098_52222242_52225716_52225809_52225964
transcript_758.known	chr1	+	681	1	FSM	ENSG00000248527.1	ENST00000514057.1	681	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	256	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCCACCAATCACATGCC	633685	False	NA	-23	True	NA	NA	NA	633695	634376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_633700_634400
transcript_75806.known	chr19	+	688	4	FSM	ENSG00000105568.18	ENST00000468280.5	688	4	0	0	0	0	multi-exon	FALSE	canonical	3	3062	junction_1	45.536310297998	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTCACTTAGGAATTGA	52153384	False	NA	NA	False	NA	NA	NA	52190113	52211694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52190175_52201943_52202035_52205962_52206064_52211259
transcript_75808.known	chr19	+	444	2	FSM	ENSG00000105568.18	ENST00000477989.1	444	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTGTTGTAAGGGCTCGA	52153361	True	NA	NA	False	AATAAA	-17	NA	52190090	52191404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52190175_52191044
transcript_7581.known	chr1	-	717	2	FSM	ENSG00000233593.11	ENST00000670028.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGCCTCATGATTGTAAT	-90851259	True	NA	NA	False	AATAAA	-15	NA	90851620	90837186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90837766_90851482
transcript_75819.known	chr19	+	2150	6	FSM	ENSG00000167554.15	ENST00000321287.12	2150	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	7.60526133673262	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTTTTTTCTTTTTTTTTTG	52335844	True	NA	6	True	AATAAA	-18	NA	52336244	52367122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52336507_52347706_52347832_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_7582.known	chr1	-	973	4	FSM	ENSG00000233593.11	ENST00000635581.3	979	4	6	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	8.04155872120988	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTATCTGCAAAATGG	-90851297	True	NA	2	True	ATTAAA	-18	NA	90851658	90782983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90783424_90789397_90789488_90831929_90832197_90851482
transcript_75822.known	chr19	+	2921	6	FSM	ENSG00000167554.15	ENST00000403906.8	2921	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.42928563989645	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTTCTACATGCCTCT	52335842	True	NA	3	True	NA	NA	NA	52336242	52367778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52336507_52347706_52347945_52349153_52349236_52353681_52353809_52354250_52354380_52365697
transcript_7583.known	chr1	-	5541	6	FSM	ENSG00000122482.22	ENST00000337393.10	5541	6	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_5	64.7870357401849	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-91022014	False	NA	NA	False	AATAAA	-18	NA	91022035	90915303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021989
transcript_75830.known	chr19	+	6282	4	FSM	ENSG00000196214.11	ENST00000439461.6	6282	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	40.6147209217982	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGTGTCTTTGATTTCT	52264932	True	NA	20	True	AATAAA	-22	NA	52269586	52296046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52290065
transcript_75839.known	chr19	+	554	3	FSM	ENSG00000196214.11	ENST00000593703.1	554	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	134	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATGTGGTAAAACCGTCAG	52264932	True	NA	NA	False	GATAAA	-16	NA	52269586	52290445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52269632_52283284_52283414_52290065
transcript_75843.known	chr19	+	2065	5	FSM	ENSG00000196214.11	ENST00000599581.5	2065	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	140.787739167869	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAATTATT	52264938	True	NA	NA	False	NA	NA	NA	52269592	52291761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52269632_52282110_52282238_52283284_52283414_52288041_52288116_52290065
transcript_75844.known	chr19	+	4746	5	FSM	ENSG00000198464.14	ENST00000595962.6	4746	5	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	22.3313120975907	1183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCACACCTTGTAAAACAT	52294416	True	NA	6	True	AATAAA	-18	NA	52297168	52325922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52297224_52300393_52300485_52314152_52314280_52315833_52315963_52321578
transcript_75846.known	chr19	+	2258	4	FSM	ENSG00000221923.9	ENST00000422689.3	2258	4	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	97.6296858314906	556	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCTACTTTACATTTTATGA	52366947	True	NA	20	True	ATTAAA	-30	NA	52369922	52385795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52383848
transcript_75847.known	chr19	+	496	4	FSM	ENSG00000221923.9	ENST00000344085.9	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	133.658769509025	414	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTCTGATTGAAGTTTGTTT	52366963	True	NA	9	True	AATAAA	-17	NA	52369938	52374717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374395_52374483
transcript_75848.known	chr19	+	953	4	FSM	ENSG00000221923.9	ENST00000600321.5	953	4	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_3	67.4405087630737	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATAGAGACAGGTTTT	52366960	True	NA	NA	False	NA	NA	NA	52369935	52380075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420
transcript_75849.known	chr19	+	558	5	FSM	ENSG00000221923.9	ENST00000424032.6	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	130.044944153935	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATGTAAACATGTCGAAAAAC	52366941	True	NA	-93	True	NA	NA	NA	52369916	52383969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298_52374428_52379420_52379541_52383848
transcript_75850.known	chr19	+	491	3	FSM	ENSG00000221923.9	ENST00000597976.5	491	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_1	17	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTGCAAAACCACACTTTGA	52366970	True	NA	-78	True	NA	NA	NA	52369945	52374630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52369978_52373110_52373238_52374298
transcript_75852.nic	chr19	-	1798	6	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	15	3	intron_retention	FALSE	canonical	2	5	junction_4	6.21610810716802	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397169	True	NA	NA	False	ATTAAA	-19	NA	52397742	52388838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52389304_52394790_52394848_52395597_52395751_52396315_52396500_52396609_52397268_52397461
transcript_75854.nic	chr19	-	1205	5	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	-16	3	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	4.26468052730799	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397234	True	NA	NA	False	ATTAAA	-19	NA	52397807	52388838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52389304_52394790_52394848_52395597_52395751_52396315_52396500_52397461
transcript_75857.known	chr19	-	929	5	FSM	ENSG00000269834.7	ENST00000596746.1	929	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	7.39509972887452	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAACTCAGACACATTGGCA	-52397193	True	NA	NA	False	NA	NA	NA	52397766	52395526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52395751_52396315_52396500_52396609_52396753_52397194_52397268_52397461
transcript_7586.known	chr1	-	2036	4	FSM	ENSG00000122482.22	ENST00000347275.9	2036	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	84.9012498272094	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAAATGTGAAACATTTCT	-91021436	False	NA	NA	False	AATAAA	-18	NA	91021457	90915303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021272
transcript_75860.nic	chr19	-	1019	4	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	-14	3	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	2.49443825784929	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397232	True	NA	NA	False	ATTAAA	-19	NA	52397805	52388838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52389304_52394790_52394848_52395597_52395751_52397461
transcript_75866.nnic	chr19	-	844	3	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	0	3	combination_of_known_splicesites	FALSE	canonical	2	2	junction_2	8	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397210	True	NA	NA	False	ATTAAA	-19	NA	52397783	52388838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52389304_52394790_52394848_52397461
transcript_75867.nnic	chr19	-	962	3	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	-14	3	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	8.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATGT	-52397232	True	NA	NA	False	ATTAAA	-19	NA	52397805	52388838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52389304_52395597_52395751_52397461
transcript_75869.nic	chr19	-	669	3	NIC	ENSG00000269834.7	novel	1069	6	NA	NA	-14	608	combination_of_known_junctions	FALSE	canonical	3	20	junction_2	2	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTGTGTATAGCAATAGG	-52397232	True	NA	NA	False	AATAAA	-21	NA	52397805	52394675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52394848_52395597_52395751_52397461
transcript_7587.known	chr1	-	1253	4	FSM	ENSG00000122482.22	ENST00000361321.5	1253	4	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_3	83.0675762390009	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTTCTAAAAGAAATATGT	-91019869	True	NA	NA	False	AAAAAG	-25	NA	91022272	90916184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90982309_90982371_91021989
transcript_75870.known	chr19	-	2376	3	FSM	ENSG00000269834.7	ENST00000663140.1	2376	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGCGACAGAGCAAGACTC	-52397210	True	NA	NA	False	NA	NA	NA	52397783	52393880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52395751_52396315_52396500_52397461
transcript_75873.known	chr19	-	2182	2	FSM	ENSG00000269834.7	ENST00000656846.1	2182	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACTCCGTCTCAAAAAAAAAA	-52397184	True	NA	NA	False	NA	NA	NA	52397757	52393864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52395751_52397461
transcript_75874.nic	chr19	-	720	2	ISM	ENSG00000269834.7	ENST00000663140.1	2376	3	-24	2245	-16	-599	5prime_fragment	FALSE	canonical	3	12	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATTAGCCAGGCATGGTG	-52397234	True	NA	NA	False	AATACA	-16	NA	52397807	52396125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52396500_52397461
transcript_75877.nic	chr19	-	493	2	ISM	ENSG00000269834.7	ENST00000596746.1	929	5	-43	1596	-18	-1596	5prime_fragment	FALSE	canonical	3	18	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTAGTTTTTTGTTGTTGTT	-52397236	True	NA	NA	False	TATAAA	-16	NA	52397809	52397122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52397268_52397461
transcript_75878.known	chr19	-	2732	1	FSM	ENSG00000269834.7	ENST00000594119.1	2732	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTACCTAGTCTTGTGTA	-52391000	False	NA	NA	False	ATTAAA	-16	NA	52391573	52388841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52388800_52391600
transcript_75884.nic	chr19	+	1039	7	NIC	ENSG00000167555.14	novel	3994	7	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	8.49836585598798	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTGCAATAATACTT	NA	False	NA	NA	False	ATTAAA	-15	NA	52397812	52408512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52408225
transcript_75885.known	chr19	+	3994	7	FSM	ENSG00000167555.14	ENST00000360465.8	3994	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	7.04745817062199	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATGAATGAATCGTGTTTT	52397308	True	NA	NA	False	AATAAA	-17	NA	52397848	52418401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52397905_52398366_52398620_52401684_52401754_52401946_52402029_52405906_52406034_52406514_52406644_52415123
transcript_75888.known	chr19	+	625	4	FSM	ENSG00000167555.14	ENST00000598192.5	625	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	10.2306728354819	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAAAGTGCAATAATACTT	52401406	False	NA	NA	False	ATTAAA	-15	NA	52401946	52408512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52402029_52405906_52406034_52406514_52406644_52408225
transcript_75891.known	chr19	+	814	4	FSM	ENSG00000258405.11	ENST00000601120.1	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	6.37704215656966	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGGAGAAAAACAATATAAAT	52490223	True	NA	NA	False	NA	NA	NA	52492829	52511142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52492864_52501826_52501909_52504654_52504782_52510571
transcript_75893.known	chr19	+	740	3	FSM	ENSG00000288253.1	ENST00000594118.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTCTGTATTTTCATTTT	52453288	True	NA	NA	False	NA	NA	NA	52453579	52458507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52453608_52456867_52456959_52457886
transcript_75894.known	chr19	+	472	3	FSM	ENSG00000288253.1	ENST00000602221.5	472	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAGATGTTTCAGGTGAAAA	52453302	True	NA	NA	False	NA	NA	NA	52453593	52458286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52453608_52456867_52456959_52457919
transcript_75897.known	chr19	+	3585	5	FSM	ENSG00000198482.14	ENST00000359798.9	3585	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	3.34477204006491	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGAGATGGAGTGTC	52526754	True	NA	NA	False	NA	NA	NA	52527667	52556336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52547511_52547639_52553106
transcript_759.known	chr1	-	6432	16	FSM	ENSG00000228327.4	ENST00000506640.2	6432	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	57.625457337303	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTTGGAGTGAGTTTCT	-777172	True	NA	NA	False	NA	NA	NA	778626	725884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_729805_733306_733365_735422_735614_743179_743351_744194_744392_744727_744826_746694_746819_756076_756142_758966_759124_764722_765248_766328_766388_768547_768614_769496_769713_772975_773108_774170_774281_778283
transcript_75901.known	chr19	+	608	4	FSM	ENSG00000198482.14	ENST00000465448.5	608	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	8.28653526310404	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTCTACCAGTGATGC	52526749	True	NA	NA	False	NA	NA	NA	52527662	52553456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52527712_52543265_52543348_52547511_52547639_52553106
transcript_75902.nnic	chr19	+	494	4	NNC	ENSG00000198482.14	novel	601	4	NA	NA	-3	-508	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	9.93310961716756	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCTTGTTGTGGATTA	52534913	True	NA	NA	False	AATACA	-29	NA	52535981	52552658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_52536047_52543265_52543348_52547511_52547639_52552438
transcript_75904.known	chr19	+	5230	4	FSM	ENSG00000167562.14	ENST00000391785.8	5230	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	9.46337971105226	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTGTAATTTATAATGTA	52568093	True	NA	5	True	AATAAA	-16	NA	52570286	52587174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52570331_52574076_52574163_52575894_52576022_52582201
transcript_75906.nnic	chr19	+	648	3	Fusion	ENSG00000198482.14_ENSG00000242255.1	novel	553	4	NA	NA	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCTTTGTTTTGTTT	52526749	True	NA	34	True	AATAGA	-14	NA	52527662	52564464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_52527712_52532907_52533010_52563967
transcript_75908.nic	chr19	+	345	2	ISM	ENSG00000198482.14	ENST00000486474.5	553	4	-126	20349	-110	-20084	5prime_fragment	FALSE	canonical	3	26	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGAGATTTTCTTTCCTT	NA	False	NA	NA	False	AATAAA	-32	NA	52527541	52533082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_52527712_52532907
transcript_75909.known	chr19	+	553	4	FSM	ENSG00000198482.14	ENST00000486474.5	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	5.73488351136175	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAGGTGAAATTGCTAATC	52526754	True	NA	NA	False	NA	NA	NA	52527667	52553431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52527712_52532907_52533010_52543265_52543348_52553106
transcript_75910.known	chr19	+	4233	4	FSM	ENSG00000198482.14	ENST00000487863.5	4233	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	2.86744175568088	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTTGCTTTGTTTTGTTT	52526738	True	NA	34	True	AATAGA	-14	NA	52527651	52564464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52527712_52543265_52543348_52553106_52556051_52563317
transcript_75918.known	chr19	-	2890	6	FSM	ENSG00000167766.20	ENST00000594682.6	2890	6	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	26.8253611345682	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAATCTGGAAAGGTTAC	-52689465	True	NA	-26	True	AATAAA	-15	NA	52690488	52612377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_75920.nnic	chr19	-	2637	5	NNC	ENSG00000167766.20	novel	2680	4	NA	NA	-7	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	32.8519405819504	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAATCTGGAAAGGTTACT	-52637251	True	NA	-25	True	AATAAA	-16	NA	52638395	52612376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52613686_52613768_52614798_52618935_52619063_52635065_52635154_52638311
transcript_75922.nic	chr19	-	698	5	ISM	ENSG00000167766.20	ENST00000596440.5	561	6	-86	119	-70	-82	5prime_fragment	FALSE	canonical	2	18	junction_2	29.8611369508932	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	-52689551	True	NA	1	True	AATGAA	-19	NA	52690574	52618793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52619063_52635065_52635154_52655560_52655688_52660761_52660844_52690442
transcript_75926.nnic	chr19	+	762	4	Antisense	novelGene_ENSG00000167766.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	3.55902608401044	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	52600885	True	NA	NA	False	AATAAA	-22	NA	52601244	52633359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_52601356_52621098_52621247_52628157_52628340_52633038
transcript_75928.nnic	chr19	-	610	4	ISM	ENSG00000167766.20	ENST00000687234.1	2779	5	-70	6377	-70	-82	5prime_fragment	FALSE	canonical	1	3	junction_1	10.8730042868667	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	-52689551	True	NA	1	True	AATGAA	-19	NA	52690574	52618793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52619063_52655560_52655688_52660761_52660844_52690442
transcript_75929.known	chr19	-	2726	4	FSM	ENSG00000167766.20	ENST00000536937.6	2680	4	-36	-10	-3	10	multi-exon	FALSE	canonical	3	46	junction_1	18.7082869338697	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTTACTAATCTAAGAT	-52637247	True	NA	-15	True	AATAAA	-26	NA	52638391	52612366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52614798_52618935_52619063_52635065_52635154_52638311
transcript_75932.nnic	chr19	-	541	4	NNC	ENSG00000167766.20	novel	937	3	NA	NA	-70	425	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	11.7756811551038	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTGGAAACCTATTGG	-52689551	True	NA	NA	False	ATTAAA	-19	NA	52690574	52654439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52654640_52655560_52655688_52660761_52660844_52690442
transcript_75933.nnic	chr19	-	591	4	NNC	ENSG00000167766.20	novel	937	3	NA	NA	-70	425	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	12.2292908852294	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTAATTGGAAACCTATTGG	-52689551	True	NA	NA	False	ATTAAA	-19	NA	52690574	52654439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52654690_52655560_52655688_52660761_52660844_52690442
transcript_75934.nnic	chr19	+	780	3	Antisense	novelGene_ENSG00000167766.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.5	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTTGGTGGT	52600885	True	NA	7	True	AATAAA	-16	NA	52601244	52627271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_52601356_52621098_52621247_52626750
transcript_75936.nnic	chr19	+	644	3	Antisense	novelGene_ENSG00000167766.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	3.5	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAAGCCTATTTGGTGGT	52600885	True	NA	7	True	AATAAA	-16	NA	52601244	52627271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_+_52601356_52621098_52621247_52626886
transcript_75939.known	chr19	-	728	3	FSM	ENSG00000167766.20	ENST00000601237.5	728	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_2	15	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAAGGTCAGGAGATCGAGA	-52637244	True	NA	NA	False	NA	NA	NA	52638388	52618499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52619063_52635065_52635154_52638311
transcript_7594.nic	chr1	-	1258	3	ISM	ENSG00000122482.22	ENST00000370440.5	5702	6	-163	25179	89	472	5prime_fragment	FALSE	canonical	3	86	junction_2	32	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATGGATGTAAGCAAG	-91021615	False	NA	NA	False	GATAAA	-44	NA	91021636	90940476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_90941310_90982309_90982371_91021272
transcript_75942.nnic	chr19	-	671	3	NNC	ENSG00000269825.2	novel	4257	4	NA	NA	-27	-35001	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACTTTGTAAAGGAAGTTT	-52689537	True	NA	NA	False	ATTAAA	-22	NA	52690560	52685447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52685872_52688588_52688718_52690442
transcript_75943.known	chr19	-	509	5	FSM	ENSG00000167766.20	ENST00000597161.6	2783	5	0	2274	0	-7	multi-exon	FALSE	canonical	3	7	junction_2	32.9573588140797	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCCAGAAAAATGTACAT	-52637211	True	NA	NA	False	NA	NA	NA	52638355	52614671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52614798_52616717_52616842_52618935_52619063_52635065_52635154_52638311
transcript_75947.known	chr19	-	577	6	FSM	ENSG00000213020.10	ENST00000640952.1	577	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	4.31740662898458	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGTGTCAAGAAGATGAAAG	-52734041	True	NA	NA	False	AAGAAA	-18	NA	52735011	52706709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52729905_52730006_52735000
transcript_75948.known	chr19	-	4417	5	FSM	ENSG00000213020.10	ENST00000540744.5	4417	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	3.90512483795333	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTTAGTCTGTTTTTCAG	-52734084	True	NA	-6	True	ACTAAA	-19	NA	52735054	52702812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52706865_52714014_52714142_52715831_52715914_52728729_52728832_52735000
transcript_7595.nnic	chr1	-	1554	3	NIC	ENSG00000122482.22	novel	514	3	NA	NA	-76	472	combination_of_known_splicesites	FALSE	canonical	3	26	junction_2	62	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAATGGATGTAAGCAAG	NA	False	NA	NA	False	GATAAA	-44	NA	91022348	90940476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_90941310_90982309_90982371_91021688
transcript_75954.known	chr19	-	302	4	FSM	ENSG00000213020.10	ENST00000599798.1	302	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	6.23609564462324	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCACCTCTGCACGGCCGCC	-52734045	True	NA	NA	False	NA	NA	NA	52735015	52721182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52721268_52728729_52728832_52729905_52730006_52735000
transcript_7596.known	chr1	-	514	3	FSM	ENSG00000122482.22	ENST00000498303.5	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	28.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTAACCACTGGACA	-91022060	False	NA	NA	False	AATAAA	-7	NA	91022081	90940948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90941310_90982309_90982371_91021989
transcript_75962.known	chr19	-	3645	4	FSM	ENSG00000189190.11	ENST00000648973.1	3645	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_3	8.83176086632785	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGAATCTGTCTCAAAAAAAA	-52785867	True	NA	NA	False	NA	NA	NA	52786807	52764549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52767773_52774574_52774702_52778825_52778908_52786594
transcript_75964.nnic	chr19	-	782	3	NNC	ENSG00000189190.11	novel	600	2	NA	NA	-36	165	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTTGTAATTTATAATATA	-52785903	True	NA	NA	False	AATAAA	-16	NA	52786843	52780826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52781056_52783694_52783999_52786594
transcript_75965.known	chr19	-	333	2	FSM	ENSG00000189190.11	ENST00000599893.1	600	2	91	176	42	163	multi-exon	FALSE	canonical	3	14	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTGTTGTAATTTATAATA	-52785760	False	NA	NA	False	AATAAA	-14	NA	52786700	52780828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52781056_52786594
transcript_75970.nic	chr19	-	4676	5	NIC	ENSG00000198538.11	novel	4558	4	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_2	27.3986769753578	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	-52821580	True	NA	-8	True	AATAAA	-22	NA	52821633	52797407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52801703_52805144_52805263_52808006_52808134_52817943_52818032_52821585
transcript_75971.known	chr19	-	4027	5	FSM	ENSG00000204604.13	ENST00000243639.8	4027	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	30.7113578338699	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATTTGGATGAGTTTGAT	-52855971	True	NA	-5	True	AATAAA	-18	NA	52857649	52838535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52842152_52845178_52845297_52849086_52849214_52854257_52854346_52857571
transcript_75972.nnic	chr19	-	749	5	NNC	ENSG00000204604.13	novel	4405	4	NA	NA	0	2171	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	42.3261148701366	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTAATTTGTAATGTA	-52855941	True	NA	NA	False	AATAAA	-16	NA	52857619	52835838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52836070_52849086_52849214_52853871_52854127_52854257_52854346_52857571
transcript_75973.known	chr19	-	4558	4	FSM	ENSG00000198538.11	ENST00000457749.7	4558	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	43.3922676163495	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTCGATTTCT	-52821580	True	NA	-8	True	AATAAA	-22	NA	52821633	52797407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52801703_52808006_52808134_52817943_52818032_52821585
transcript_75974.nnic	chr19	-	546	4	NNC	ENSG00000204604.13	novel	4405	4	NA	NA	-22	2171	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	54.1007290975721	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTGTAATTTGTAATGTA	-52855993	True	NA	NA	False	AATAAA	-16	NA	52857671	52835838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52836070_52849086_52849214_52854257_52854346_52857571
transcript_75977.known	chr19	-	394	3	FSM	ENSG00000198538.11	ENST00000464469.2	394	3	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	16.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCTGGACTTTCACTGTC	-52821580	True	NA	NA	False	ACTAAA	-44	NA	52821633	52807875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52808134_52817943_52818032_52821585
transcript_75979.nic	chr19	-	353	3	NIC	ENSG00000198538.11	novel	228	2	NA	NA	-38	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_1	38.5	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	NA	False	NA	-18	True	ATTAAA	-8	NA	52821707	52814283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52814427_52817943_52818032_52821585
transcript_7598.known	chr1	-	710	2	FSM	ENSG00000122482.22	ENST00000482467.1	710	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAAGCATAAAGCTTGATT	-91021704	False	NA	NA	False	NA	NA	NA	91021725	91020528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_91021202_91021688
transcript_75980.nic	chr19	-	336	3	Fusion	ENSG00000204604.13_ENSG00000198538.11	novel	228	2	NA	NA	-27	0	multi-exon	FALSE	canonical	3	30	junction_1	63.5	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	NA	False	NA	-18	True	ATTAAA	-8	NA	52857676	52814283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_-_52814427_52817943_52818032_52857571
transcript_75983.known	chr19	-	228	2	FSM	ENSG00000198538.11	ENST00000542421.1	228	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTTATATTTAAACATCACA	-52817975	False	NA	-18	True	ATTAAA	-8	NA	52818028	52814283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52814427_52817943
transcript_7599.known	chr1	-	820	2	FSM	ENSG00000122482.22	ENST00000495966.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATACTGCAATTATATCATA	-91022034	False	NA	NA	False	ATTAAA	-3	NA	91022055	91020447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_91021202_91021989
transcript_75995.nnic	chr19	-	1382	7	NNC	ENSG00000182986.15	novel	3168	8	NA	NA	-11	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	22.504937729801	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGAGTTTTCGTTTT	-52894904	True	NA	-5	True	AATACA	-22	NA	52897704	52861054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52861605_52863798_52864160_52873991_52874073_52888126_52888254_52890240_52890329_52891228_52891347_52897647
transcript_76.known	ERCC-00158	+	1012	1	FSM	ERCC-00158A	DQ516795	1012	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00158_+_0_1000
transcript_76001.nnic	chr19	-	1306	6	NNC	ENSG00000182986.15	novel	3168	8	NA	NA	-53	24	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	17.8504901893477	10	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGATGAGTTTTCGTTTT	NA	False	NA	-5	True	AATACA	-22	NA	52897746	52861054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_52861605_52863798_52864160_52873991_52874073_52888126_52888254_52890240_52890329_52897647
transcript_76012.nic	chr19	-	532	4	ISM	ENSG00000182986.15	ENST00000593618.5	598	5	-20	6229	-11	207	5prime_fragment	FALSE	canonical	3	5	junction_3	22.3954360429878	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	-52894904	True	NA	NA	False	AATGAA	-19	NA	52897704	52887984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_52888254_52890240_52890329_52891228_52891347_52897647
transcript_76017.nnic	chr19	-	439	3	NIC	ENSG00000213793.6	novel	562	5	NA	NA	0	-6890	combination_of_known_splicesites	FALSE	canonical	3	16	junction_2	11	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGACTTTCACTGTCCCC	-52922701	True	NA	NA	False	AATGAA	-19	NA	52923470	52915058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_52915323_52917858_52917932_52923368
transcript_76018.known	chr19	+	486	2	FSM	ENSG00000269646.1	ENST00000594546.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAACTCGGTGTCTGAGAGG	NA	False	NA	NA	False	AATAAA	-13	NA	52923381	52924075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_52923465_52923672
transcript_76021.known	chr19	-	2697	5	FSM	ENSG00000180257.14	ENST00000357666.8	2697	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	25.1632172028936	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACATTAGAGTTGATTCA	-52962089	True	NA	-26	True	AATAAA	-29	NA	52962861	52949378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52960026_52960178_52962726
transcript_76023.known	chr19	-	2990	4	FSM	ENSG00000242779.7	ENST00000270443.8	2990	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	6.68331255192114	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGAGGCATTTCATTTCT	-52993184	True	NA	-9	True	AATATA	-17	NA	52993524	52968250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52970843_52980891_52980973_52986574_52986847_52993479
transcript_76025.known	chr19	-	491	4	FSM	ENSG00000180257.14	ENST00000438970.6	491	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	24.5356882927706	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTATGTTCAGTAG	-52962099	True	NA	NA	False	NA	NA	NA	52962871	52951750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951892_52952750_52952878_52956026_52956105_52962726
transcript_76026.known	chr19	-	553	4	FSM	ENSG00000180257.14	ENST00000457013.6	553	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	17.5941909605289	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGTGGCAAGAAGTTGAA	-52962139	True	NA	NA	False	AAGAAA	-20	NA	52962911	52951431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962716
transcript_76027.known	chr19	-	2560	4	FSM	ENSG00000180257.14	ENST00000444460.7	2560	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	11.323525167642	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTAATTGACATTAGAGTT	-52962109	True	NA	-32	True	AATAAA	-23	NA	52962881	52949384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52951585_52952750_52952878_52956026_52956105_52962726
transcript_76029.known	chr19	-	827	4	FSM	ENSG00000242779.7	ENST00000599093.5	827	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.78888096369861	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTGAGTTATAAAGAAAAGAT	-52993185	True	NA	NA	False	AAAAAG	-1	NA	52993525	52975372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52975801_52980891_52980973_52986574_52986847_52993479
transcript_7603.known	chr1	-	5702	6	FSM	ENSG00000122482.22	ENST00000370440.5	5702	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	66.9256303668482	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAAACATTTCTTATTTT	-91021452	False	2403	NA	False	AATAAA	-24	NA	91021473	90915297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_90916991_90918051_90918155_90937484_90938091_90938271_90941310_90982309_90982371_91021272
transcript_76034.known	chr19	-	529	3	FSM	ENSG00000180257.14	ENST00000535506.5	529	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	21.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGACTCTTCTTTGGAGTG	-52962106	True	NA	NA	False	NA	NA	NA	52962878	52952588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52952878_52956026_52956105_52962716
transcript_76035.known	chr19	-	582	3	FSM	ENSG00000180257.14	ENST00000270457.8	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	13.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACATCATCCTGCTCTAGGAA	-52962099	True	NA	NA	False	CATAAA	-39	NA	52962871	52952518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52952878_52956026_52956105_52962726
transcript_76039.known	chr19	-	495	1	FSM	ENSG00000213801.4	ENST00000550843.1	495	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAGTGGCAAATCCTTTA	NA	False	NA	2	True	NA	NA	NA	52929397	52928902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52928900_52929400
transcript_76040.known	chr19	-	2341	2	FSM	ENSG00000213801.4	ENST00000313956.4	2341	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-52942227	True	NA	NA	False	NA	NA	NA	52942601	52927134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_52929415_52942540
transcript_76045.known	chr19	-	4431	6	FSM	ENSG00000170949.18	ENST00000683776.1	4431	6	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	57.4337879649253	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAATGAATCACATTCTTTC	-53101485	True	NA	NA	False	AATAAA	-20	NA	53103422	53066613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53070263_53074139_53074269_53075056_53075184_53086261_53086322_53091412_53091721_53103264
transcript_76047.known	chr19	-	583	5	FSM	ENSG00000170949.18	ENST00000596966.5	583	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	42.39914503855	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGCTGTGTAAACCATGATAA	-53101479	True	NA	NA	False	NA	NA	NA	53103416	53085939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53086110_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_76049.nnic	chr19	-	907	5	NNC	ENSG00000170949.18	novel	583	5	NA	NA	0	299	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	57.6389625166866	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCATGGAGACTGTGATGT	-53101485	True	NA	NA	False	ATTAAA	-19	NA	53103422	53085640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53086129_53086261_53086322_53091412_53091530_53091636_53091721_53103264
transcript_7605.known	chr1	-	1699	11	FSM	ENSG00000162669.16	ENST00000488023.1	1699	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	5.65331761004103	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAGTAACTTCACTAACAA	-91404453	True	NA	NA	False	NA	NA	NA	91404808	91377758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_91378184_91378402_91378481_91379062_91379215_91380103_91380237_91380911_91380983_91385186_91385235_91385574_91385835_91394092_91394403_91396292_91396406_91401011_91401110_91404797
transcript_76055.known	chr19	-	1728	4	FSM	ENSG00000170949.18	ENST00000597112.5	1728	4	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_2	37.4788829431544	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCCACCCTGGCTGCCTG	-53101486	True	NA	NA	False	NA	NA	NA	53103423	53084953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53086322_53091412_53091530_53091636_53091721_53103264
transcript_76062.known	chr19	-	4553	5	FSM	ENSG00000197937.13	ENST00000452676.6	4553	5	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_2	12.2065556157337	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGATGTAGAACAATTTTTT	-53158491	True	NA	NA	False	AATACA	-19	NA	53159060	53138704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53142557_53148680_53148813_53149240_53149368_53153732_53153794_53158679
transcript_76063.known	chr19	-	2812	5	FSM	ENSG00000197937.13	ENST00000601469.2	2812	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	11.4537111889553	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACCAACATGGCGAAACCC	-53158484	True	NA	NA	False	NA	NA	NA	53159053	53140109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53142557_53148680_53148813_53149240_53149368_53153732_53153794_53159008
transcript_76064.known	chr19	-	2469	5	FSM	ENSG00000170954.12	ENST00000597503.5	2469	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	16.695807857064	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131818	True	NA	-1	True	ATTAAA	-23	NA	53132886	53107878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132748
transcript_76065.nic	chr19	-	2396	5	NIC	ENSG00000170954.12	novel	2479	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	7	junction_1	16.0058583025091	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131852	True	NA	-1	True	ATTAAA	-23	NA	53132920	53107878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_53109909_53115209_53115308_53116312_53116434_53122661_53122744_53132855
transcript_76068.known	chr19	-	2258	5	FSM	ENSG00000170954.12	ENST00000598578.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	18.5657614979833	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACATCAAAATGTGTAAAC	-53131813	True	NA	NA	False	NA	NA	NA	53132881	53108100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115703_53115925_53116312_53116434_53122661_53122744_53132855
transcript_76070.known	chr19	-	589	5	FSM	ENSG00000170954.12	ENST00000601110.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	20.2036506602149	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCAACAAAGTGACTACGGC	-53131836	True	NA	NA	False	AATACA	-38	NA	53132904	53109726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53123500_53123656_53132855
transcript_76082.known	chr19	-	2402	4	FSM	ENSG00000170954.12	ENST00000421033.5	2402	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	16.3571255285137	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGGTTGTCTCAGATTTTA	-53131850	True	NA	-2	True	ATTAAA	-22	NA	53132918	53107879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132748
transcript_76083.known	chr19	-	2288	4	FSM	ENSG00000170954.12	ENST00000243643.9	2288	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	7.78888096369861	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131842	True	NA	-1	True	ATTAAA	-23	NA	53132910	53107878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53116312_53116434_53122661_53122744_53132855
transcript_76091.known	chr19	-	582	3	FSM	ENSG00000170954.12	ENST00000595359.5	582	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	0.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATGAAAGAAATTGCAACAAA	NA	False	NA	NA	False	AATACA	-27	NA	53133077	53109737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53122661_53122744_53132748
transcript_76092.known	chr19	-	2132	3	FSM	ENSG00000170954.12	ENST00000601493.5	2132	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	9	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131807	True	NA	-1	True	ATTAAA	-23	NA	53132875	53107878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53122661_53122744_53132855
transcript_76095.known	chr19	-	604	3	FSM	ENSG00000197937.13	ENST00000595710.1	604	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	7.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCCTCCCTCCTCATGTA	-53158506	True	NA	NA	False	NA	NA	NA	53159075	53148891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53149368_53153732_53153794_53159008
transcript_76099.known	chr19	-	2479	6	FSM	ENSG00000170954.12	ENST00000595193.5	2479	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.6547581061776	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTGTCTCAGATTTTAA	-53131827	True	NA	-1	True	ATTAAA	-23	NA	53132895	53107878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53109909_53115209_53115308_53115703_53115812_53116312_53116434_53122661_53122744_53132855
transcript_76105.known	chr19	-	4158	4	FSM	ENSG00000197497.11	ENST00000396424.5	4158	4	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	3.2659863237109	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGAATGAATCATTTCTT	-53193025	True	NA	NA	False	AATAAA	-19	NA	53193358	53162423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53166348_53175444_53175572_53182883_53182944_53193311
transcript_76107.nnic	chr19	-	1056	4	NNC	ENSG00000197497.11	novel	552	3	NA	NA	-41	639	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	5.79271573232759	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCTGTGTAGTTCT	NA	False	NA	1	True	AATAAA	-31	NA	53193427	53178928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53179349_53179524_53179985_53182883_53182944_53193311
transcript_76108.nnic	chr19	-	881	4	NNC	ENSG00000197497.11	novel	552	3	NA	NA	-41	639	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.79271573232759	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTCCTGTGTAGTTCT	NA	False	NA	1	True	AATAAA	-31	NA	53193427	53178928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53179349_53179699_53179985_53182883_53182944_53193311
transcript_76109.known	chr19	-	552	3	FSM	ENSG00000197497.11	ENST00000597544.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	4.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGGGTATGCCGTCCTCC	-53193053	True	NA	NA	False	NA	NA	NA	53193386	53179567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53179985_53182883_53182944_53193311
transcript_7611.nic	chr1	-	953	2	ISM	ENSG00000162669.16	ENST00000427444.1	672	4	-281	14867	-265	-6308	5prime_fragment	FALSE	canonical	3	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTTGCCTATTTGGCTT	-91405108	True	NA	NA	False	AAGAAA	-14	NA	91405121	91400480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_91401110_91404797
transcript_76115.known	chr19	+	197	3	ISM	ENSG00000269001.3	ENST00000691047.1	2921	5	73	9360	73	-337	5prime_fragment	FALSE	canonical	3	6	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGAGGAGTGGAAATGCCTG	53196657	False	NA	NA	False	NA	NA	NA	53197185	53204055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_53197263_53200623_53200704_53204015
transcript_76118.nnic	chr19	+	544	2	FSM	ENSG00000269001.3	ENST00000601072.2	538	2	-6	0	5	0	multi-exon	FALSE	canonical	3	5	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACTTTGGGCCAGCGTGG	53196567	True	NA	NA	False	AATAAA	-24	NA	53197095	53204392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53197263_53204015
transcript_76119.nnic	chr19	+	848	2	FSM	ENSG00000269001.3	ENST00000601072.2	538	2	-6	-304	5	304	multi-exon	FALSE	canonical	3	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAGAAAAAGAAAAAGTAA	53196567	True	NA	NA	False	NA	NA	NA	53197095	53204696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53197263_53204015
transcript_76120.known	chr19	-	907	1	FSM	ENSG00000267809.1	ENST00000596415.1	907	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTATATTGAACTGTAAA	NA	False	NA	NA	False	NA	NA	NA	53224879	53223972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53224000_53224900
transcript_76125.nnic	chr19	-	684	5	NNC	ENSG00000197928.11	novel	3512	5	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	124.997999984	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	-53251930	True	NA	0	True	AATAAA	-24	NA	53254920	53238289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_53238558_53243709_53243898_53251535_53251606_53253085_53253157_53254833
transcript_76126.known	chr19	-	622	5	FSM	ENSG00000197928.11	ENST00000594517.5	622	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	133.650664046237	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGAGTGTTTCTATAAGAG	-53251698	False	NA	0	True	AATAAA	-24	NA	53254688	53238289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254629
transcript_76127.known	chr19	-	3512	5	FSM	ENSG00000197928.11	ENST00000598513.6	3512	5	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	104.633885524719	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAATCGTGTGCCTTCCGTC	-53251883	True	NA	NA	False	AGTAAA	-27	NA	53254873	53235380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53238558_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_76131.known	chr19	-	796	5	FSM	ENSG00000197928.11	ENST00000599012.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	108.68417548107	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATACATTTTTAAAGTTCAGT	-53251870	True	NA	NA	False	NA	NA	NA	53254860	53241391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53241866_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_76136.nic	chr19	-	858	5	NIC	ENSG00000197928.11	novel	935	5	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	113.52752970095	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	NA	False	NA	NA	False	AAAAAG	-11	NA	53254989	53241923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_76139.known	chr19	-	701	5	FSM	ENSG00000197928.11	ENST00000598806.5	701	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	104.300946783814	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATGCCTGTAATACCAGCT	-53251889	True	NA	NA	False	AATACA	-23	NA	53254879	53242080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53242441_53243743_53243898_53251535_53251606_53253085_53253157_53254833
transcript_76141.known	chr19	-	719	4	FSM	ENSG00000197928.11	ENST00000601828.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_3	77.1275999021535	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCTTCGTAGCTGAACAAA	-53251856	True	NA	NA	False	NA	NA	NA	53254846	53243332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53243898_53251535_53251606_53253085_53253157_53254833
transcript_76144.known	chr19	-	3207	1	FSM	ENSG00000197928.11	ENST00000599328.1	3207	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	36	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGATGGAAAGCCTGTGG	-53241776	False	NA	-9	True	AATAAA	-20	NA	53241803	53238596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53238600_53241800
transcript_76145.known	chr19	-	935	5	FSM	ENSG00000197928.11	ENST00000594681.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	123.057913195373	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTACACATTCCTAGAGTCTG	-53251841	True	NA	NA	False	AAAAAG	-11	NA	53254831	53241923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53242331_53243743_53243898_53251535_53251606_53253085_53253157_53254598
transcript_76146.known	chr19	+	496	3	FSM	ENSG00000189348.6	ENST00000599085.1	496	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGCAAAGCCCAGACCAC	NA	False	NA	NA	False	NA	NA	NA	53282289	53284349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53282327_53282808_53282918_53283999
transcript_76149.known	chr19	+	4413	5	FSM	ENSG00000213799.13	ENST00000595091.6	4413	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	22.3439029715043	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGATTTTCTTTCTTTTTT	53332273	True	NA	27	True	AGTAAA	-17	NA	53333748	53354869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53333793_53340823_53340926_53341234_53341323_53345505_53345633_53350817
transcript_7615.nnic	chr1	+	3187	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-43	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	124.042781209742	287	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	NA	False	NA	17	True	AATAAA	-22	NA	91500807	91525764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_91500878_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_76150.known	chr19	+	6348	4	FSM	ENSG00000213799.13	ENST00000458035.3	6348	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	19.2527054375915	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACAGCGAGACTCTGTCT	53332273	True	NA	NA	False	NA	NA	NA	53333748	53356906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53333793_53341234_53341323_53345505_53345633_53350817
transcript_76156.nnic	chr19	+	513	5	NNC	ENSG00000196417.13	novel	4572	4	NA	NA	-20	-1143	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	59.7175644178495	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTTTTCTGCAAGGAT	53391677	True	NA	17	True	AATAAA	-24	NA	53395123	53406955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53395194_53397942_53398031_53402064_53402192_53404473_53404548_53406801
transcript_76160.nnic	chr19	+	559	4	NNC	ENSG00000203326.12	novel	569	4	NA	NA	-58	-713	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_3	24.1154629969146	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGCTTGCTGTGGATTA	53363552	True	NA	NA	False	AATACA	-29	NA	53365634	53380336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53365760_53372214_53372297_53375769_53375897_53380111
transcript_76162.known	chr19	+	6133	4	FSM	ENSG00000203326.12	ENST00000474037.6	6133	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	13.490737563232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAATGATGTAATTCCAT	53363622	True	NA	8	True	AATAAA	-28	NA	53365704	53386590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53380721
transcript_76164.known	chr19	+	1868	4	FSM	ENSG00000203326.12	ENST00000475179.5	1868	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	20.8326666559997	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAACAAAAGTCAAATGATG	53363630	True	NA	-1	True	AATAAA	-19	NA	53365712	53386581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53384969
transcript_76165.known	chr19	+	590	4	FSM	ENSG00000203326.12	ENST00000593918.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	24.9577420631132	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAATAATTCTGAGCCTT	53363646	True	NA	NA	False	TTTAAA	-10	NA	53365728	53392217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53365760_53372214_53372297_53375769_53375897_53391867
transcript_76169.nnic	chr19	+	439	4	NNC	ENSG00000196417.13	novel	4572	4	NA	NA	-20	-1143	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	57.8676651219545	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCCTTTTCTGCAAGGAT	53391677	True	NA	17	True	AATAAA	-24	NA	53395123	53406955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53395194_53397942_53398031_53402064_53402192_53406801
transcript_76170.known	chr19	+	4572	4	FSM	ENSG00000196417.13	ENST00000396408.8	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	26.2339898266013	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCGATGAGTTTGATTTCT	53391702	True	NA	24	True	AATATA	-22	NA	53395148	53412009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53407697
transcript_76172.known	chr19	+	7588	4	FSM	ENSG00000196417.13	ENST00000594030.2	7588	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	48.3804368176504	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATTCTAAATTTTATTATT	53391726	True	NA	4	True	AATAAA	-17	NA	53395172	53430413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061
transcript_76178.nnic	chr19	+	523	3	NNC	ENSG00000196417.13	novel	522	3	NA	NA	-20	-7874	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	50	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGCTGGTTGTGAAAATT	53391677	True	NA	NA	False	AGTAAA	-21	NA	53395123	53400224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53395194_53397942_53398031_53399859
transcript_76179.known	chr19	+	2059	8	FSM	ENSG00000196417.13	ENST00000504235.5	2059	8	0	0	0	0	multi-exon	TRUE	canonical	3	8	junction_5	47.7254050345755	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCATGTTTTTTAGAATTT	53391697	True	NA	NA	False	ATTAAA	-19	NA	53395143	53427321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53395194_53397942_53398031_53402064_53402192_53423061_53423503_53425070_53425148_53425329_53425452_53426017_53426937_53427086
transcript_7618.known	chr1	+	3215	12	FSM	ENSG00000097046.13	ENST00000234626.11	3215	12	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_1	40.4156094548048	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91493119	True	NA	17	True	AATAAA	-22	NA	91500850	91525764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_76182.known	chr19	+	938	6	FSM	ENSG00000160336.17	ENST00000610928.4	938	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.994399874554	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428972	True	NA	12	True	AATAAA	-22	NA	53431992	53450331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53445000_53445124_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_76187.known	chr19	+	1538	6	FSM	ENSG00000160336.17	ENST00000651864.1	1538	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	127.662053876632	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	53428963	True	NA	NA	False	AATAAA	-19	NA	53431983	53461862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53445000_53445220_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_76191.nic	chr19	+	860	5	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	72	junction_4	116.440972170452	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428927	True	NA	12	True	AATAAA	-22	NA	53431947	53450331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53449878
transcript_76192.known	chr19	+	3983	5	FSM	ENSG00000160336.17	ENST00000684525.1	3983	5	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	97.2969038561865	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	53428963	True	NA	29	True	AATATA	-22	NA	53431983	53458261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53454649
transcript_76194.nic	chr19	+	1355	5	NIC	ENSG00000160336.17	novel	1538	6	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_4	128.201745307933	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	53428927	True	NA	NA	False	AATAAA	-19	NA	53431947	53461862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53446226_53446338_53447195_53447284_53449511_53449639_53460914
transcript_762.known	chr1	+	566	2	FSM	ENSG00000237491.10	ENST00000457084.1	566	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCAAAAAAACAGAAGAAGT	778443	True	NA	NA	False	CATAAA	-1	NA	778781	782191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_779093_781936
transcript_7620.nnic	chr1	+	3199	12	NNC	ENSG00000097046.13	novel	3215	12	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	50	junction_1	119.92077274408	275	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91493101	True	NA	17	True	AATAAA	-22	NA	91500832	91525764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_91500949_91501687_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_76203.nnic	chr19	+	731	4	NIC	ENSG00000160336.17	novel	938	6	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	133.312498372141	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATGTGTGTCCTTAAGGC	53428945	True	NA	12	True	AATAAA	-22	NA	53431965	53450331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53449878
transcript_76204.nnic	chr19	+	3890	4	NIC	ENSG00000160336.17	novel	3983	5	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	57	junction_1	118.467998491857	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGATGAGTTTTATTTCC	53428945	True	NA	29	True	AATATA	-22	NA	53431965	53458261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53454649
transcript_76205.nnic	chr19	+	1226	4	NIC	ENSG00000160336.17	novel	1538	6	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	3	27	junction_3	144.299072146089	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATAAAACTTCCTAATATTT	53428945	True	NA	NA	False	AATAAA	-19	NA	53431965	53461862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_53432029_53447195_53447284_53449511_53449639_53460914
transcript_76206.nnic	chr19	+	1451	4	NNC	ENSG00000241015.2	novel	2920	2	NA	NA	-16	301	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_2	9.93310961716756	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTTTGTCACATCCTA	53428947	True	NA	5	True	AATACA	-16	NA	53431967	53442908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53432029_53433579_53433751_53439827_53439934_53441795
transcript_76209.known	chr19	+	6153	4	FSM	ENSG00000198346.11	ENST00000396403.9	6153	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	47.4856703531591	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAGAGTACCTTAATT	53465430	True	NA	16	True	AATAAA	-18	NA	53467732	53496255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53467790_53483749_53483838_53486631_53486759_53490374
transcript_76211.nnic	chr19	+	1313	3	NNC	ENSG00000241015.2	novel	2920	2	NA	NA	-49	301	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	7.5	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGCCTTTGTCACATCCTA	53428914	True	NA	5	True	AATACA	-16	NA	53431934	53442908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53432029_53439827_53439934_53441795
transcript_76212.nnic	chr19	+	212	3	NNC	ENSG00000241015.2	novel	2920	2	NA	NA	-40	5663	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	48.5	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGTGTCCTTAAGGCTA	53428923	True	NA	14	True	AATAAA	-24	NA	53431943	53450333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53432029_53445000_53445040_53450245
transcript_76216.known	chr19	+	2920	2	FSM	ENSG00000241015.2	ENST00000424846.3	2920	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTGTCTCTGTGTCTTA	53428963	True	NA	28	True	NA	NA	NA	53431983	53444670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53432029_53441795
transcript_76220.known	chr19	+	646	3	FSM	ENSG00000160336.17	ENST00000613950.1	646	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	161.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGAGTCTATGAGTTTCTT	NA	False	NA	35	True	AATAAA	-45	NA	53447236	53450354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53447284_53449511_53449639_53449882
transcript_76221.nnic	chr19	+	1020	5	NNC	ENSG00000213777.5	novel	551	3	NA	NA	-77	705	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	5.16599457994296	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTTGAGTAAAATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	53503741	53513392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53504097_53511962_53512149_53512600_53512696_53512858_53513048_53513197
transcript_76222.nnic	chr19	+	903	5	NNC	ENSG00000213777.5	novel	551	3	NA	NA	-77	705	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.81534007106456	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTTTGAGTAAAATTA	NA	False	NA	NA	False	ATTAAA	-18	NA	53503741	53513392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53504097_53511962_53512149_53512600_53512696_53512975_53513048_53513197
transcript_76227.known	chr19	+	5042	7	FSM	ENSG00000130844.19	ENST00000253144.13	5042	7	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_2	44.2681224660214	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53516951	True	NA	14	True	AATAAA	-17	NA	53521023	53580269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_76229.known	chr19	+	1985	7	FSM	ENSG00000130844.19	ENST00000511593.6	1985	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	100.36378275498	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTGTGCCCTTCTGAGTAG	53521837	False	NA	30	True	AATAAA	-18	NA	53521855	53578081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53555844_53555909_53563762_53563793_53569303_53569386_53571603_53571731_53576696
transcript_7623.known	chr1	+	3313	12	FSM	ENSG00000097046.13	ENST00000428239.5	3313	12	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	129.005605618484	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCAGACTACTCATTTGAA	91500793	True	NA	17	True	AATAAA	-22	NA	91501107	91525764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_91501304_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057_91513308_91513947_91514044_91514818_91514998_91515793_91515877_91520129_91520280_91524040
transcript_76230.known	chr19	+	4065	6	FSM	ENSG00000130844.19	ENST00000449416.6	4065	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	80.7415630267336	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCTTTGTTGGATATTCAA	53537750	True	NA	14	True	AATAAA	-17	NA	53538144	53580269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53538297_53539215_53539283_53555844_53555909_53569303_53569386_53571603_53571731_53576696
transcript_76232.known	chr19	+	540	5	FSM	ENSG00000130844.19	ENST00000511567.5	540	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	118.888603322606	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTATGTCAAAAGACCTGC	53554506	False	NA	NA	False	NA	NA	NA	53554600	53576875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53554694_53555844_53555904_53569303_53569386_53571603_53571731_53576696
transcript_76234.nnic	chr19	+	847	4	NNC	ENSG00000130844.19	novel	572	3	NA	NA	-6	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	95.5440561556116	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	53516945	True	NA	-32	True	NA	NA	NA	53521017	53523515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53521316_53521855_53522085_53522616_53522685_53523263
transcript_76236.known	chr19	+	572	3	FSM	ENSG00000130844.19	ENST00000649816.1	572	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	86.5	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTGTCCCAATTTTTAA	53521814	False	NA	-32	True	NA	NA	NA	53521832	53523515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53522085_53522616_53522685_53523263
transcript_76247.nnic	chr19	+	2060	4	NNC	ENSG00000179820.16	novel	3054	3	NA	NA	-10	-3	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	124.667557929078	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGGACTTGTGCTTTCTTA	53863187	True	NA	12	True	TATAAA	-8	NA	53867872	53876432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_53867944_53869753_53869839_53873527_53874812_53875812
transcript_76251.known	chr19	+	1579	3	FSM	ENSG00000179820.16	ENST00000421337.6	1579	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_1	115.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTTTCTTTTCTTTTT	53865148	True	NA	NA	False	NA	NA	NA	53866152	53874756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53866418_53869753_53869839_53873527
transcript_76253.known	chr19	+	3054	3	FSM	ENSG00000179820.16	ENST00000391770.9	3054	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	105	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACTTGTGCTTTCTTAATG	53863197	True	NA	15	True	TATAAA	-11	NA	53867882	53876435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53867944_53869753_53869839_53873527
transcript_76255.known	chr19	+	777	3	FSM	ENSG00000179820.16	ENST00000448420.5	777	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	144	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTCATCAGCGACCCCAAC	53863197	True	NA	NA	False	NA	NA	NA	53867882	53874094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53867944_53869689_53869839_53873527
transcript_76257.known	chr19	-	423	2	FSM	ENSG00000232220.2	ENST00000413496.2	423	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGGAGGGAGGGGAGACAG	-53876028	False	NA	NA	False	AAAAAG	-1	NA	53876049	53874625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_53874822_53875822
transcript_76258.known	chr19	+	2997	19	FSM	ENSG00000126583.12	ENST00000682028.1	2997	19	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_7	13.7163730223733	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTCCCACCCGGCCA	53881162	True	NA	-47	True	NA	NA	NA	53882188	53907594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_53882665_53883162_53883195_53884160_53884244_53889637_53889750_53889885_53890018_53891673_53891831_53892508_53892644_53892987_53893076_53893361_53893392_53897958_53898112_53898439_53898629_53900232_53900325_53900418_53900482_53900610_53900750_53903072_53903154_53904634_53904743_53906316_53906458_53906706_53906892_53906993
transcript_76267.nnic	chr19	+	868	2	NNC	ENSG00000130433.8	novel	2501	4	NA	NA	18791	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACTTTGCTTTGGAGTCTA	NA	False	NA	22	True	ATTAAA	-16	NA	54011668	54012666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_54011821_54011950
transcript_76269.nic	chr19	-	576	5	ISM	ENSG00000189068.11	ENST00000338372.7	967	9	21405	0	15931	0	3prime_fragment	FALSE	canonical	1	2	junction_3	1.6583123951777	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGACTTATTTATGGATTA	NA	False	NA	NA	False	AATAAA	-27	NA	54042492	54040824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54041081_54041778_54041817_54041915_54041954_54042168_54042197_54042276
transcript_76288.known	chr19	-	774	6	FSM	ENSG00000105619.14	ENST00000391757.1	774	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	84.8966430431734	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113915	True	NA	-7	True	AATAAA	-16	NA	54115288	54107019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108208_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_76291.known	chr19	-	804	6	FSM	ENSG00000105619.14	ENST00000391758.5	804	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	91.408095921532	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113701	False	NA	-7	True	AATAAA	-16	NA	54115074	54107019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115039
transcript_76293.known	chr19	-	1180	6	FSM	ENSG00000105619.14	ENST00000391759.6	1180	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	29.4957624075053	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	NA	False	NA	-7	True	AATAAA	-16	NA	54115657	54107019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54110050_54110122_54114441_54114701_54115246
transcript_76307.known	chr19	-	737	5	FSM	ENSG00000105619.14	ENST00000420715.6	737	5	0	0	0	0	multi-exon	TRUE	canonical	1	6	junction_3	94.578010129205	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCGGCCACCGTCTACTTG	-54113912	True	NA	-7	True	AATAAA	-16	NA	54115285	54107019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54107170_54108025_54108245_54108325_54108396_54114441_54114701_54115246
transcript_76312.known	chr19	+	379	4	FSM	ENSG00000170906.16	ENST00000303553.5	379	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	1589.30788570231	5843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086690	True	NA	13	True	AATAAA	-15	NA	54102884	54106961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102960_54103113_54103189_54105933_54106012_54106810
transcript_76322.known	chr19	+	654	5	FSM	ENSG00000170906.16	ENST00000419113.5	654	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	1406.8806585848	7662	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACTTAGTAAACATTCAT	54086626	True	NA	NA	False	NA	NA	NA	54102820	54108704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106810_54106979_54108439
transcript_76323.known	chr19	+	435	5	FSM	ENSG00000170906.16	ENST00000391762.5	435	5	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_3	1359.99308362212	2649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086657	True	NA	13	True	AATAAA	-15	NA	54102851	54106961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102889_54103113_54103189_54105933_54106012_54106352_54106447_54106810
transcript_76324.known	chr19	+	338	4	FSM	ENSG00000170906.16	ENST00000391763.3	338	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1612.80624998789	17937	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAACGTGAGCATGTGTGTG	54086674	True	NA	17	True	AATAAA	-19	NA	54102868	54106965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102899_54103113_54103189_54105933_54106012_54106810
transcript_76325.known	chr19	+	445	5	FSM	ENSG00000170906.16	ENST00000451517.5	445	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	1382.72213405297	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086660	True	NA	13	True	AATAAA	-15	NA	54102854	54106961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54102889_54103113_54103189_54105596_54105704_54105933_54106012_54106810
transcript_76326.known	chr19	+	541	3	FSM	ENSG00000170906.16	ENST00000484103.1	541	3	0	0	0	0	multi-exon	FALSE	canonical	3	3280	junction_2	153	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54086682	True	NA	13	True	AATAAA	-15	NA	54102876	54106961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54103189_54105933_54106012_54106810
transcript_76327.known	chr19	+	339	3	FSM	ENSG00000170906.16	ENST00000420296.1	339	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	128	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCGAACGTGAGCATGTG	54105941	False	NA	13	True	AATAAA	-15	NA	54105964	54106961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54106012_54106352_54106447_54106763
transcript_76328.known	chr19	+	1833	14	FSM	ENSG00000105618.14	ENST00000321030.9	1833	14	0	0	0	0	multi-exon	FALSE	canonical	3	497	junction_1	90.5830554840606	1040	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTCCTTGGGGAGTGATC	54102554	True	NA	15	True	ATTAAA	-16	NA	54115753	54131713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54115798_54118270_54118456_54118572_54118634_54121859_54121944_54122496_54122595_54123453_54123561_54123748_54123919_54124498_54124657_54126527_54126618_54128072_54128201_54128304_54128378_54129056_54129186_54129271_54129371_54131306
transcript_76330.known	chr19	+	2818	18	FSM	ENSG00000088038.19	ENST00000221232.11	2818	18	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_1	48.2872747176104	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGGCAGCAGCGGCCTC	NA	False	NA	32	True	AATAAA	-14	NA	54137761	54155681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54137994_54142928_54143004_54143118_54143187_54143441_54143517_54143659_54143750_54144005_54144135_54144236_54144333_54145597_54145818_54145909_54146044_54146600_54146658_54148147_54148536_54148619_54148744_54149559_54149759_54152225_54152326_54152427_54152627_54152866_54153000_54153714_54153841_54155308
transcript_76345.known	chr19	-	1381	4	FSM	ENSG00000105617.4	ENST00000222224.4	1381	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_3	16.0831174424198	827	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACAAGGTTCTTCTTGGGT	NA	False	NA	NA	False	NA	NA	NA	54159721	54155160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54155941_54156762_54157026_54158281_54158462_54159563
transcript_7635.nic	chr1	+	1025	7	ISM	ENSG00000097046.13	ENST00000234626.11	3215	12	-43	12458	-43	1483	5prime_fragment	TRUE	canonical	3	383	junction_1	44.5371255870376	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATCTCTTTTATTTC	NA	False	NA	34	True	ATTAAA	-18	NA	91500807	91513306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057
transcript_76352.known	chr19	-	2413	15	FSM	ENSG00000167608.12	ENST00000617472.4	2413	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	7.70137809030279	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTCCCTGACTCTCGGGTGA	NA	False	NA	-67	True	NA	NA	NA	54173250	54160164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54165418_54165567_54168170_54168293_54168447_54168681_54169511_54169661_54171869_54172102_54173038
transcript_76355.nnic	chr19	-	1492	10	NNC	ENSG00000167608.12	novel	2362	15	NA	NA	-133	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_9	7.4103697780147	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54164849	54160107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54160375_54160466_54160546_54160877_54161034_54161129_54161261_54162101_54162286_54162672_54162771_54163032_54163160_54163723_54163888_54164433_54164602_54164731
transcript_7636.nic	chr1	+	1193	7	ISM	ENSG00000097046.13	ENST00000234626.11	3215	12	-43	12290	-43	1651	5prime_fragment	FALSE	canonical	3	383	junction_1	44.5371255870376	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATTTTGGTTACTATTTTA	NA	False	NA	NA	False	ATTAAA	-24	NA	91500807	91513474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_91500949_91501653_91501832_91507853_91507938_91508261_91508398_91511596_91511691_91511780_91511924_91513057
transcript_76361.nnic	chr19	-	740	4	NNC	ENSG00000167608.12	novel	1560	9	NA	NA	975	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.3648246606609	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54162292	54160107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54160375_54160466_54160546_54160877_54161081_54162101
transcript_76363.nnic	chr19	-	542	3	NIC	ENSG00000167608.12	novel	1560	9	NA	NA	970	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	13.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54162297	54160107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_54160375_54160466_54160546_54162101
transcript_76365.nic	chr19	-	899	3	ISM	ENSG00000167608.12	ENST00000613492.4	537	4	-94	6084	-4	-1021	5prime_fragment	FALSE	canonical	2	14	junction_2	6.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGCGCACGCCTGTA	NA	False	NA	NA	False	AATACA	-14	NA	54173254	54169191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_54169661_54171869_54172084_54173038
transcript_76367.known	chr19	-	450	2	FSM	ENSG00000167608.12	ENST00000611183.4	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54160649	54160107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54160375_54160466
transcript_76368.known	chr19	-	506	3	FSM	ENSG00000167608.12	ENST00000615945.4	506	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	13	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCGCTTTGAAATCTGCGT	NA	False	NA	-10	True	AATAAA	-19	NA	54160972	54160107	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54160375_54160466_54160611_54160877
transcript_76372.known	chr19	-	2294	8	FSM	ENSG00000125505.17	ENST00000245615.6	2294	8	0	0	0	0	multi-exon	TRUE	canonical	3	501	junction_2	87.2474781812036	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCGTGTCCGTGCAGGTA	NA	False	NA	-8	True	AATAAA	-14	NA	54189580	54173414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54174432_54178764_54178942_54180772_54181134_54183520_54183681_54187160_54187288_54188216_54188347_54188432_54188512_54189337
transcript_76374.known	chr19	+	2160	4	FSM	ENSG00000170892.13	ENST00000396388.3	2160	4	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	29.4656108408128	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGCAGTTTTATTTTGTCA	54190955	False	NA	NA	False	NA	NA	NA	54191307	54194532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54191608_54191720_54191965_54192115_54192374_54193174
transcript_76375.known	chr19	+	2372	3	FSM	ENSG00000170892.13	ENST00000496583.1	2372	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	31	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATTTGAATGTTTGCGA	54189990	True	NA	12	True	AATAAA	-18	NA	54190342	54193666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54191965_54192115_54192374_54193174
transcript_76382.known	chr19	+	944	6	FSM	ENSG00000170889.14	ENST00000445961.5	944	6	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3936.73248265614	524	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102669	True	NA	26	True	AATAAA	-20	NA	54200871	54207647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_76387.known	chr19	+	772	5	FSM	ENSG00000170889.14	ENST00000391752.5	772	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	3716.94978275198	42401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102669	True	NA	26	True	AATAAA	-20	NA	54200871	54207647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200962_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_7639.known	chr1	+	151	1	FSM	ENSG00000229067.1	ENST00000439897.1	151	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATAAGGAATTGCACATGAG	NA	False	NA	NA	False	NA	NA	NA	91600170	91600321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_91600200_91600300
transcript_76395.known	chr19	+	713	5	FSM	ENSG00000170889.14	ENST00000302907.9	713	5	0	0	0	0	multi-exon	FALSE	canonical	3	4876	junction_1	1672.59917493702	210168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102655	True	NA	26	True	AATAAA	-20	NA	54200857	54207647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54206275_54206463_54207397
transcript_76396.known	chr19	+	709	4	FSM	ENSG00000170889.14	ENST00000391753.6	709	4	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	638.75156011986	51594	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54200893	False	NA	26	True	AATAAA	-20	NA	54201132	54207647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54201282_54201486_54201610_54206275_54206463_54207397
transcript_76397.known	chr19	+	510	4	FSM	ENSG00000170889.14	ENST00000391751.7	510	4	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_3	3008.97402226517	10991	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGGTGTGTGGGGGTCTCTC	54102671	True	NA	26	True	AATAAA	-20	NA	54200873	54207647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200889_54201159_54201282_54201486_54201610_54207397
transcript_76398.known	chr19	+	956	5	FSM	ENSG00000170889.14	ENST00000495002.5	956	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_4	3826.90952336216	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAATTGGTGTGTGGGGGTCT	54102676	True	NA	23	True	AATAAA	-17	NA	54200878	54207644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206725_54207397
transcript_76399.known	chr19	+	1600	3	FSM	ENSG00000170889.14	ENST00000441429.1	1600	3	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	372	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATCAGCGCTTTACAATTG	54199010	True	NA	9	True	AATAAA	-3	NA	54201159	54207630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54201282_54201486_54201610_54206275
transcript_7640.known	chr1	+	1436	7	FSM	ENSG00000172031.7	ENST00000370383.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	1.86338998124982	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGTAAGTGCTTCCA	92029962	True	NA	NA	False	AATATA	-21	NA	92029984	92063538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92030311_92032504_92032591_92042822_92042981_92045531_92045661_92050316_92050421_92052509_92052659_92063054
transcript_76400.known	chr19	+	752	6	FSM	ENSG00000170889.14	ENST00000436445.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_4	3819.31676612454	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAAGGGCCAGGGTGGG	54102668	True	NA	-82	True	NA	NA	NA	54200870	54207522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54200894_54201159_54201282_54201486_54201610_54206275_54206463_54206552_54206725_54207397
transcript_76401.known	chr19	+	644	2	FSM	ENSG00000170889.14	ENST00000460761.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	3	7752	junction_1	0	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTAAGTTTTCTCGTTTTA	54199010	True	NA	NA	False	NA	NA	NA	54201159	54202008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54201282_54201486
transcript_76403.known	chr19	+	1763	13	FSM	ENSG00000167614.14	ENST00000376531.3	1763	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_11	21.8193339342275	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGGTCCTCCTTATTTCT	NA	False	NA	19	True	AATAAA	-23	NA	54415525	54436719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54415679_54419127_54419307_54421276_54421389_54422189_54422411_54426672_54426769_54429306_54429380_54429881_54429958_54430549_54430606_54430812_54430906_54431098_54431192_54435541_54435685_54436090_54436172_54436332
transcript_76404.known	chr19	+	3658	16	FSM	ENSG00000167615.17	ENST00000326764.10	3658	16	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_15	77.1148061874847	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGCACGCTCCTGCTTTGT	NA	False	NA	16	True	ATTAAA	-16	NA	54449198	54462016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_54449311_54451289_54451383_54452092_54452268_54452650_54452753_54453545_54453657_54454429_54454683_54454950_54455093_54455363_54455568_54455966_54456246_54456324_54456466_54456635_54456922_54457746_54457849_54457933_54458003_54458102_54458233_54458313_54458522_54460765
transcript_76407.known	chr19	-	896	3	FSM	ENSG00000167617.3	ENST00000301200.3	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	14	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGACTTTTCACTTTGC	NA	False	NA	-19	True	CATAAA	-21	NA	54473296	54465025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54465548_54471544_54471686_54473063
transcript_76408.nnic	chr19	-	573	3	NNC	ENSG00000167617.3	novel	288	2	NA	NA	-39	-2497	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGCTGCCAGCTTCAAATT	NA	False	NA	NA	False	AATAAA	-20	NA	54473335	54467522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54467683_54471544_54471686_54473063
transcript_76409.nnic	chr19	-	759	3	NNC	ENSG00000167617.3	novel	288	2	NA	NA	-162	909	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGTAGTCTTTCTTTC	NA	False	NA	NA	False	AATAAA	-12	NA	54473458	54470596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_54470820_54471544_54471686_54473063
transcript_76411.known	chr19	-	3826	13	FSM	ENSG00000167634.12	ENST00000588756.5	3826	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	11.9222015118387	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGCTGCGTTTATTGA	NA	False	NA	-6	True	AATAAA	-15	NA	54966243	54923514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_54923873_54927604_54927776_54930498_54930667_54933568_54933740_54934488_54934660_54936260_54936432_54938043_54938242_54938887_54940467_54940930_54941006_54941434_54941751_54947468_54947506_54947642_54947850_54966039
transcript_76414.known	chr19	-	1481	8	FSM	ENSG00000160439.16	ENST00000592573.1	1481	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	29.1386551592519	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGGAGAGGGGCCATCTGAT	-55062802	True	NA	NA	False	NA	NA	NA	55063086	55044854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55045310_55047386_55047489_55048045_55048258_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_76416.known	chr19	-	1931	7	FSM	ENSG00000160439.16	ENST00000610356.4	1931	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_2	7.1043804953157	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGTACCCGAGTCGTAG	NA	False	NA	23	True	AAAAAG	-4	NA	55063217	55044323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55045310_55047386_55047489_55048328_55048542_55048658_55048764_55056652_55056809_55059156_55059276_55062967
transcript_7642.known	chr1	+	1412	9	FSM	ENSG00000189195.15	ENST00000342818.4	1412	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	2.98956518577535	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTATAGTACTTTCAGT	92080219	True	NA	NA	False	ATTAAA	-13	NA	92080335	92147840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349_92139431_92141114_92141212_92147179_92147269_92147683
transcript_76426.nnic	chr19	-	778	3	Antisense	novelGene_ENSG00000267265.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	13.5	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGCTCTGCATGAATT	NA	False	NA	-26	True	AATAAA	-17	NA	55012133	55005382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_55005624_55009976_55010251_55011870
transcript_7643.known	chr1	+	1616	6	FSM	ENSG00000189195.15	ENST00000370382.7	1616	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	2.92574776766556	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAAAGCT	NA	False	NA	NA	False	AATACA	-14	NA	92080304	92139946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92080721_92088697_92088896_92102472_92102670_92107883_92108002_92129686_92129777_92139349
transcript_76431.nnic	chr19	-	524	2	Antisense	novelGene_ENSG00000267265.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGCTCTGCATGAATT	NA	False	NA	-26	True	AATAAA	-17	NA	55012153	55005382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_55005624_55011870
transcript_76433.nnic	chr19	-	856	2	Antisense	novelGene_ENSG00000267265.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCAGCTCTGCATGAATT	NA	False	NA	-26	True	AATAAA	-17	NA	55012132	55005382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr19_-_55005977_55011870
transcript_76446.known	chr19	-	967	14	FSM	ENSG00000105048.18	ENST00000291901.12	967	14	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_13	360.172509620585	1016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_76451.known	chr19	-	1111	14	FSM	ENSG00000105048.18	ENST00000588981.6	1111	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	373.051069683115	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTGCTGGTGGGAATGG	-55147634	False	2141	94	True	ATTAAA	-22	NA	55149206	55132697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134205_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_76453.known	chr19	-	934	13	FSM	ENSG00000105048.18	ENST00000356783.9	934	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	364.501143116635	870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGGTCTCTCCTGGTTAA	-55147634	False	2141	-2	True	NA	NA	NA	55149206	55132793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680_55146708_55147007_55147022_55147125_55147169_55149160
transcript_76473.known	chr19	-	995	10	FSM	ENSG00000105048.18	ENST00000585321.6	995	10	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_9	239.366808759699	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCGGTAGCTTGAAATAAAC	-55143760	True	NA	-73	True	NA	NA	NA	55146942	55132864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146680
transcript_76474.known	chr19	-	1065	11	FSM	ENSG00000105048.18	ENST00000587465.6	1065	11	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_10	270.201942998195	1572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACACCCGCTGGGTTCTCTG	-55143767	True	NA	-43	True	AATAAA	-12	NA	55146949	55132834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55141921_55145543_55145566_55146433_55146467_55146680
transcript_76475.known	chr19	-	880	10	FSM	ENSG00000105048.18	ENST00000587089.6	880	10	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_8	288.080535721746	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGTCCCATCGGTAGC	-55144313	False	NA	-84	True	NA	NA	NA	55146454	55132875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55132961_55133886_55133928_55134065_55134157_55137102_55137213_55137960_55138075_55140882_55140961_55141185_55141303_55141856_55142058_55145543_55145566_55146433
transcript_76476.known	chr19	-	2169	12	FSM	ENSG00000167646.14	ENST00000391720.8	2169	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_6	11.1362708715988	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTGTCCAAGCGTCTT	-55166608	False	NA	-2	True	AGTAAA	-19	NA	55166651	55158662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55159450_55159532_55159608_55159898_55160014_55160639_55160776_55161064_55161188_55161292_55161419_55161642_55161826_55162132_55162291_55165369_55165464_55165857_55166001_55166328_55166418_55166511
transcript_76482.known	chr19	-	699	4	FSM	ENSG00000129991.13	ENST00000585806.5	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	38.7843038125248	1339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACTCCATGTCTATTACC	-55154340	True	NA	-3	True	AATAAA	-20	NA	55156481	55151766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200
transcript_76496.known	chr19	-	669	5	FSM	ENSG00000129991.13	ENST00000588882.1	669	5	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	115.275756341045	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGTGACTCCATGTCTAT	-55156463	False	NA	-7	True	AATAAA	-16	NA	55156725	55151770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55151918_55154029_55154207_55154740_55154831_55156200_55156333_55156602
transcript_76497.known	chr19	+	857	2	FSM	ENSG00000267649.1	ENST00000585911.1	857	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AGTACACAGCAATAAAAATA	55216637	True	NA	NA	False	GATAAA	-2	NA	55216659	55221616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55216710_55220809
transcript_76498.known	chr19	+	748	1	FSM	ENSG00000267649.1	ENST00000591484.1	748	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTTGAGTCTTGAGTAA	55216659	False	NA	NA	False	AAAACA	-29	NA	55216681	55217429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55216700_55217400
transcript_76504.known	chr19	-	1635	8	FSM	ENSG00000133265.11	ENST00000433386.7	1635	8	0	0	0	0	multi-exon	TRUE	canonical	3	512	junction_7	79.0207929236711	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-55275505	True	NA	-3	True	AATAAA	-22	NA	55280110	55262222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55262683_55265277_55265390_55265885_55265983_55266130_55266287_55274397_55274623_55277641_55277847_55279398_55279703_55280034
transcript_7651.known	chr1	-	2006	19	FSM	ENSG00000174842.17	ENST00000370360.8	2006	19	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_12	42.4179673088808	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAATTTCTATAATGATACA	-92295723	True	NA	69	True	AATAAA	-19	NA	92298987	92246401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_76511.nnic	chr19	-	779	4	NNC	ENSG00000133265.11	novel	1635	8	NA	NA	-109	0	intron_retention	FALSE	canonical	2	41	junction_2	303.273620496226	45	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGAGCCATTGTGTCATTTA	-55280207	False	NA	-3	True	AATAAA	-22	NA	55280219	55262222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_55262683_55265277_55265368_55279658_55279703_55280034
transcript_76512.nnic	chr19	-	663	4	NNC	ENSG00000133265.11	novel	1635	8	NA	NA	-109	-108	intron_retention	FALSE	canonical	2	41	junction_2	303.273620496226	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCGCCTTTGTCATCTCC	-55280207	False	NA	-4	True	AATAAA	-31	NA	55280219	55262338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_55262683_55265277_55265368_55279658_55279703_55280034
transcript_76514.known	chr19	+	3277	19	FSM	ENSG00000160469.17	ENST00000309383.6	3277	19	0	0	0	0	multi-exon	TRUE	canonical	1	4	junction_3	11.3731598701548	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATAATAATAAATAGCC	55283812	True	NA	72	True	NA	NA	NA	55283996	55312562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55284579_55287006_55287102_55287213_55287300_55289479_55289621_55294016_55294134_55294213_55294248_55294328_55294398_55301511_55301659_55302136_55302169_55302696_55302868_55303310_55303409_55303666_55303827_55304049_55304111_55304550_55304921_55305320_55305370_55305462_55305587_55306251_55306451_55308638_55308729_55311910
transcript_76521.known	chr19	-	479	4	FSM	ENSG00000160471.13	ENST00000589467.1	479	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	6.23609564462324	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGATGTTTCTTCTTAATG	-55354627	True	NA	NA	False	NA	NA	NA	55354719	55353596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55353775_55353865_55353967_55354409_55354540_55354649
transcript_76523.known	chr19	-	3058	8	FSM	ENSG00000267706.3	ENST00000591954.3	3058	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.62791874388349	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGATGACGCCACCTCTGAG	NA	False	NA	NA	False	NA	NA	NA	55359516	55352300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55352327_55352532_55352737_55353311_55353394_55353606_55353775_55353865_55354540_55354649_55355096_55355259_55355346_55358144
transcript_76524.known	chr19	+	605	5	FSM	ENSG00000160472.5	ENST00000291934.4	605	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	2.58602010819715	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	55376767	True	NA	NA	False	AATACA	-16	NA	55376825	55378246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55376912_55376990_55377027_55377592_55377719_55377801_55377887_55377974
transcript_76526.nic	chr19	+	1419	4	NIC	ENSG00000160472.5	novel	605	5	NA	NA	-248	0	intron_retention	TRUE	canonical	2	9	junction_1	2.35702260395516	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTCTCTTCTCTGAA	NA	False	NA	NA	False	AATACA	-16	NA	55376577	55378246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_55376912_55376990_55377719_55377801_55377887_55377974
transcript_76527.known	chr19	-	695	2	FSM	ENSG00000233493.4	ENST00000444469.4	695	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTGCATGTCTGTCTGGG	-55383382	True	NA	-7	True	GATAAA	-17	NA	55384292	55379243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55379368_55383721
transcript_76534.known	chr19	-	2559	4	FSM	ENSG00000108106.14	ENST00000264552.14	2559	4	0	0	0	0	multi-exon	FALSE	canonical	3	10693	junction_3	558.147133130882	301	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCTGACAGAGTTCCTCAA	-55334533	True	NA	-6	True	AATAAA	-18	NA	55407788	55399744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55401763_55404287_55404479_55406814_55406963_55407586
transcript_76535.known	chr19	+	616	5	FSM	ENSG00000108107.15	ENST00000558815.5	616	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	2625.08698665397	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCACATGCCTATGACTA	55255216	True	NA	40	True	TATAAA	-34	NA	55385931	55391803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55391553
transcript_76536.known	chr19	+	444	4	FSM	ENSG00000108107.15	ENST00000558131.1	444	4	0	0	0	0	multi-exon	FALSE	canonical	1	47	junction_2	3008.95434033523	19224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCCTCGACTGGGCCTCC	55385500	True	NA	29	True	AATAAA	-18	NA	55386349	55388373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55386439_55386569_55386675_55387929_55388049_55388242
transcript_76537.known	chr19	+	670	5	FSM	ENSG00000108107.15	ENST00000560055.5	670	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2633.03991376887	353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAACTGAGTTTTACGGCA	55255220	True	NA	NA	False	ATTAAA	-22	NA	55385935	55403250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55386694_55387929_55388049_55402942
transcript_76538.known	chr19	+	1692	4	FSM	ENSG00000108107.15	ENST00000560881.5	1692	4	0	0	0	0	multi-exon	FALSE	canonical	3	3897	junction_1	1199.02071152531	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGCAATAAAGTCAGCT	55255227	True	NA	-1	True	NA	NA	NA	55385942	55388343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55385966_55386349_55386439_55386569_55388049_55388242
transcript_76545.known	chr19	-	1566	5	FSM	ENSG00000063241.8	ENST00000438389.6	1566	5	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	86.1259978171516	1398	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-55462324	False	NA	-9	True	AATAAA	-17	NA	55462343	55452984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55456348_55456490_55461511
transcript_76546.known	chr19	-	1075	6	FSM	ENSG00000063241.8	ENST00000425675.7	1075	6	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_3	88.9390802740842	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAAACCATTCTTGGGTT	-55455267	True	NA	-9	True	AATAAA	-17	NA	55461642	55452984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455331_55455635_55455846_55456348_55456490_55461511
transcript_76547.known	chr19	-	1122	6	FSM	ENSG00000063241.8	ENST00000085068.7	1122	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	129.499652509186	194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGGACCAAACCATTCTTG	-55455270	True	NA	-13	True	AATAAA	-13	NA	55461645	55452988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55453389_55454988_55455107_55455259_55455379_55455635_55455846_55456348_55456490_55461511
transcript_76548.known	chr19	-	1337	2	FSM	ENSG00000283567.2	ENST00000635964.2	1337	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTCAAAAAGCAAGATTC	-55464495	True	NA	-13	True	AATAAA	-17	NA	55464751	55463000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_55463968_55464381
transcript_76549.nnic	chr19	+	488	3	NIC	ENSG00000090971.5	novel	416	3	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	84	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	55485144	False	NA	37	True	AATAAA	-13	NA	55485172	55487566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_55485259_55485660_55485730_55487233
transcript_76551.nnic	chr19	+	420	3	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	-15	-375	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	83	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGCTCTCGTTCATTCATT	55485144	False	NA	NA	False	NA	NA	NA	55485172	55486232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55485259_55485660_55485781_55486018
transcript_76552.nnic	chr19	+	719	3	NNC	ENSG00000090971.5	novel	1350	3	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	80	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	55485144	False	NA	37	True	AATAAA	-13	NA	55485172	55487566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55485259_55485660_55485781_55487053
transcript_76553.known	chr19	+	1011	2	FSM	ENSG00000090971.5	ENST00000591590.1	1011	2	0	0	0	0	multi-exon	FALSE	canonical	3	168	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGCCTGGGGGGCCCCT	55483356	True	NA	NA	False	GGGGCT	-14	NA	55485194	55486607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55485259_55485660
transcript_76554.known	chr19	+	545	3	FSM	ENSG00000090971.5	ENST00000592719.1	545	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	84	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCTGTCTCTTCTCTGA	55483384	True	NA	39	True	AATAAA	-15	NA	55485222	55487568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55485259_55485660_55485730_55487128
transcript_76555.known	chr19	+	416	3	FSM	ENSG00000090971.5	ENST00000587400.1	416	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	84	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGTCTCTTCTCT	55483395	True	NA	37	True	AATAAA	-13	NA	55485233	55487566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55485259_55485660_55485719_55487233
transcript_76557.known	chr19	+	1197	2	FSM	ENSG00000171425.10	ENST00000270451.6	1197	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	1919	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	55637513	True	NA	16	True	AATAAA	-18	NA	55643648	55645623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55643775_55644552
transcript_76558.known	chr19	+	1100	2	FSM	ENSG00000171425.10	ENST00000588537.1	1100	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCACTCGAGGTTTGTTTT	55643694	True	NA	14	True	AATAAA	-16	NA	55643809	55645621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55643841_55644552
transcript_76559.nnic	chr19	+	1302	2	NNC	ENSG00000171425.10	novel	1100	2	NA	NA	-14	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_1	0	271	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTCGAGGTTTGTTTTTA	55643759	False	NA	16	True	AATAAA	-18	NA	55643795	55645623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55644027_55644552
transcript_76562.nnic	chr19	+	1519	13	NNC	ENSG00000063244.13	novel	3022	12	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	23.9472800589591	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620849	True	NA	33	True	ATTAAA	-23	NA	55654978	55674716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669170_55669443_55669693_55673933_55673963_55674633
transcript_76566.known	chr19	+	2146	12	FSM	ENSG00000063244.13	ENST00000308924.9	2146	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	24.2728975138735	309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620905	True	NA	33	True	ATTAAA	-23	NA	55655034	55674716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668587_55668669_55668793_55669082_55669182_55669443_55669693_55673933
transcript_76571.nnic	chr19	+	978	9	NNC	ENSG00000063244.13	novel	2146	12	NA	NA	-56	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_8	26.943227349373	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGAGCGGCTGTGTGTCCAG	55620849	True	NA	33	True	ATTAAA	-23	NA	55654978	55674716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_55655154_55659209_55659346_55660176_55660222_55660515_55660620_55661037_55661190_55662501_55662619_55663605_55663745_55668506_55668534_55674633
transcript_76578.known	chr19	+	16219	11	FSM	ENSG00000063245.15	ENST00000270460.11	16219	11	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_8	83.227159028769	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTCAAACGTTCTTGTCT	55660007	True	NA	NA	False	ATTAAA	-21	NA	55675225	55709533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_55675436_55678526_55678856_55685395_55685646_55688869_55688995_55689296_55689372_55689866_55689951_55691753_55692058_55692685_55692797_55692950_55693038_55694725_55694984_55695147
transcript_76583.known	chr19	-	1657	2	FSM	ENSG00000142409.6	ENST00000587279.1	1657	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAAGAAAAAGCCCTA	-56115584	True	NA	NA	False	NA	NA	NA	56121250	56101649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56103228_56121171
transcript_76584.known	chr19	-	1940	3	FSM	ENSG00000142409.6	ENST00000610935.2	1940	3	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	0.5	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTCTGCGTGGTTCTTGA	-56115629	True	NA	-2	True	AATAAA	-19	NA	56121295	56087365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56089093_56103138_56103228_56121171
transcript_76589.nic	chr19	+	625	2	ISM	ENSG00000167685.15	ENST00000337080.8	1943	5	-2	14095	2	-247	5prime_fragment	FALSE	canonical	3	287	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAAAAAAAAGAGCGTTGG	56136507	True	NA	NA	False	AATAAA	-3	NA	56141284	56146798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_56141358_56146246
transcript_76592.nic	chr19	-	2054	6	NIC	ENSG00000131848.10	novel	2151	6	NA	NA	-17	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_1	9.86711710683521	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTGTATAACGGAAAAC	NA	False	NA	-15	True	AATAAA	-21	NA	56314876	56221311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225049_56313282_56313385_56314680
transcript_76594.known	chr19	-	2151	6	FSM	ENSG00000131848.10	ENST00000683990.1	2151	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	10.0518654985033	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACGGAAAACTGAGTTTCC	-56314086	True	NA	-6	True	AATAAA	-30	NA	56314839	56221302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56224662_56225174_56313282_56313385_56314680
transcript_76596.known	chr19	-	1542	5	FSM	ENSG00000131848.10	ENST00000587492.5	1542	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	15.8271917913444	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGCGTCTGACACACAGAGG	NA	False	NA	NA	False	NA	NA	NA	56314925	56221486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56222327_56222590_56222742_56223630_56223835_56313282_56313385_56314680
transcript_766.known	chr1	+	1771	7	FSM	ENSG00000228794.11	ENST00000661237.2	1823	7	41	11	7	-9	multi-exon	FALSE	canonical	0	0	junction_3	24.8422802674974	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAATGCTCTGTGAGGTA	826989	True	NA	0	True	AATAAA	-3	NA	827699	854376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827776_829002_829105_841199_841374_847653_847807_851926_852111_852670_852767_853390
transcript_76600.nnic	chr19	-	567	4	NNC	ENSG00000131848.10	novel	314	3	NA	NA	-17	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	19.8662192343351	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGTCTCAGGTATTCTGT	NA	False	NA	NA	False	AATAAA	-21	NA	56314876	56280598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_56280701_56283720_56283888_56313282_56313385_56314680
transcript_76606.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000589279.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTCAAGTCTAAAATAATTT	-56314080	True	NA	NA	False	NA	NA	NA	56314833	56274538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56274909_56313282_56313385_56314619
transcript_76607.known	chr19	-	686	3	FSM	ENSG00000131848.10	ENST00000591078.5	686	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	22	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAACGTGTTCCTCTACA	-56314106	True	NA	NA	False	AATAAA	-7	NA	56314859	56274503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56274909_56313282_56313385_56314680
transcript_76610.nic	chr19	-	445	3	NIC	ENSG00000131848.10	novel	314	3	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	-56314110	True	NA	NA	False	AATAAA	-18	NA	56314863	56280601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_56280701_56313282_56313385_56314619
transcript_76611.known	chr19	-	314	3	FSM	ENSG00000131848.10	ENST00000585670.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	19	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGTCTCAGGTATTC	-56314040	False	NA	NA	False	AATAAA	-18	NA	56314793	56280601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56280701_56313282_56313385_56314680
transcript_76618.known	chr19	+	945	6	FSM	ENSG00000240225.10	ENST00000589844.5	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	49.0444696168691	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAGAAAAGCCGTATGAATG	56367947	True	NA	NA	False	NA	NA	NA	56368138	56377366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368221_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_76619.known	chr19	+	1989	6	FSM	ENSG00000240225.10	ENST00000488113.5	1989	6	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_5	40.2720746920245	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTCTTCGGGTGCATT	56366742	True	NA	24	True	ATTAAA	-14	NA	56368318	56378350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374758_56376866
transcript_76620.known	chr19	+	3440	6	FSM	ENSG00000240225.10	ENST00000490123.5	3440	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_5	45.6832573269464	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTCTAGCTTATTTGCAT	56367947	True	NA	15	True	AATAAA	-22	NA	56368138	56379553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56374685_56374826_56376866
transcript_76624.known	chr19	+	3393	5	FSM	ENSG00000240225.10	ENST00000495307.5	3393	5	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_4	29.6310647800581	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTTTGTCTTTTACTTTT	56366744	True	NA	26	True	AATAGA	-20	NA	56368320	56379828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56368461_56368865_56368937_56373156_56373284_56373530_56373624_56376866
transcript_76626.nic	chr19	-	958	5	NIC	ENSG00000018869.18	novel	625	5	NA	NA	-51	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_1	13.0647426304539	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	-56393142	True	NA	-4	True	AATAAA	-15	NA	56393589	56375845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_76627.known	chr19	-	625	5	FSM	ENSG00000018869.18	ENST00000589143.5	625	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	16.976086121365	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGACGATTCAAGCTCATT	-56393031	True	NA	-4	True	AATAAA	-15	NA	56393478	56375845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56376122_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_76628.known	chr19	-	733	5	FSM	ENSG00000018869.18	ENST00000587778.5	733	5	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	6.86931583201704	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGAACTCCTTATTAAT	-56392881	False	NA	0	True	AATAAA	-20	NA	56393328	56384872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393219
transcript_76629.known	chr19	-	712	5	FSM	ENSG00000018869.18	ENST00000593145.5	712	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	15.1554445662277	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTTCTGGCAAAAGGAACTC	-56393091	True	NA	-9	True	AATAAA	-11	NA	56393538	56384881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56385185_56390000_56390097_56390374_56390502_56391743_56391833_56393441
transcript_76634.nnic	chr19	+	1055	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	15.8192920195564	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392955	True	NA	20	True	AATAAA	-14	NA	56393656	56399168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56394054_56394216_56394385_56397880_56397989_56398276_56398384_56398893
transcript_76636.nnic	chr19	+	1112	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_3	9.19238815542512	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392955	True	NA	20	True	AATAAA	-14	NA	56393656	56399168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56394054_56394216_56394442_56397880_56397989_56398276_56398384_56398893
transcript_76638.nic	chr19	+	1172	5	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	9.19238815542512	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392955	True	NA	20	True	AATAAA	-14	NA	56393656	56399168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_56394054_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_76642.nnic	chr19	+	1194	5	NNC	ENSG00000267454.6	novel	1274	4	NA	NA	7	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	14.9415527974839	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392961	True	NA	20	True	AATAAA	-14	NA	56393662	56399168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_56394082_56394216_56394442_56397880_56398049_56398276_56398384_56398893
transcript_76643.known	chr19	+	4916	5	FSM	ENSG00000198440.9	ENST00000333201.13	4916	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	2.38484800354236	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGTGTCAGACACGTGT	56404049	True	NA	NA	False	AATATA	-18	NA	56404331	56427364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56404453_56407025_56407124_56413958_56414086_56414344_56414441_56422890
transcript_76652.nic	chr19	+	1400	4	NIC	ENSG00000267454.6	novel	1274	4	NA	NA	1	0	intron_retention	FALSE	canonical	3	34	junction_1	3.55902608401044	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56392955	True	NA	20	True	AATAAA	-14	NA	56393656	56399168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_56394054_56394216_56394442_56397880_56398384_56398893
transcript_76657.known	chr19	+	518	3	FSM	ENSG00000267454.6	ENST00000591172.5	518	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGCACGGGGTTTATAGAC	56392954	True	NA	NA	False	NA	NA	NA	56393655	56398152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56393677_56394216_56394442_56397880
transcript_76662.known	chr19	+	656	3	FSM	ENSG00000198440.9	ENST00000539211.6	656	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGCCCTGGATGGTGAAGA	56404047	True	NA	NA	False	NA	NA	NA	56404329	56414393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56404453_56407025_56407124_56413958
transcript_76663.known	chr19	+	445	2	FSM	ENSG00000267454.6	ENST00000593109.1	445	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAACCTGGTGAGCTCTATG	56393109	False	NA	NA	False	NA	NA	NA	56393810	56394433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56394039_56394216
transcript_76664.known	chr19	+	1274	4	FSM	ENSG00000267454.6	ENST00000589888.5	1274	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	10.5303793326209	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCCACAGCTGTCTTGGTAA	56393016	True	NA	20	True	AATAAA	-14	NA	56393717	56399168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56394442_56397880_56398049_56398276_56398384_56398893
transcript_76665.known	chr19	-	3832	5	FSM	ENSG00000198046.13	ENST00000292069.10	3832	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	7.94905654779232	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACAGTTGGGCTCTTCTGT	-56477319	False	NA	-4	True	AATAAA	-30	NA	56477374	56439324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56477271
transcript_76666.known	chr19	-	567	5	FSM	ENSG00000198046.13	ENST00000587555.5	567	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	18.3354165483089	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAACTTCATCAGAACATT	-56478010	False	NA	NA	False	TTTAAA	-42	NA	56478065	56442519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56442742_56458154_56458248_56460688_56460816_56462337_56462430_56478032
transcript_76669.known	chr19	+	908	3	FSM	ENSG00000166770.12	ENST00000654200.1	908	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	19.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGATTTGTCTTCCTTATTCT	NA	False	NA	16	True	AATAAA	-21	NA	56477589	56495439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56477926_56494162_56494343_56495047
transcript_76670.known	chr19	+	705	3	FSM	ENSG00000166770.12	ENST00000592146.4	730	3	24	1	-3	1	multi-exon	FALSE	canonical	3	20	junction_1	10.5	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGTCTTCCTTATTCTTT	56476878	True	NA	18	True	AATAAA	-23	NA	56478145	56495441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478277_56494162_56494343_56495047
transcript_76671.nic	chr19	+	947	3	FSM	ENSG00000166770.12	ENST00000693493.1	707	3	-240	0	42	0	multi-exon	FALSE	canonical	3	22	junction_1	9.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56477888	False	NA	14	True	AATAAA	-19	NA	56477916	56495437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478294_56494162_56494343_56495047
transcript_76674.known	chr19	+	1601	2	FSM	ENSG00000166770.12	ENST00000586822.3	1619	2	0	18	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACCTTCTACTGACAAACT	NA	False	NA	-4	True	AATAAA	-1	NA	56477581	56495419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56477926_56494162
transcript_76675.nic	chr19	+	1645	2	FSM	ENSG00000166770.12	ENST00000691191.1	1435	2	-215	5	32	0	multi-exon	FALSE	canonical	3	20	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56477878	False	NA	14	True	AATAAA	-19	NA	56477906	56495437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478277_56494162
transcript_76676.known	chr19	+	495	2	FSM	ENSG00000166770.12	ENST00000601875.2	1412	2	83	834	10	284	multi-exon	FALSE	canonical	3	22	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAGTAAAGTACATTCACAT	56476972	True	NA	NA	False	AATGAA	-34	NA	56478239	56494603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478294_56494162
transcript_76677.known	chr19	+	818	3	FSM	ENSG00000166770.12	ENST00000685306.1	1083	3	260	5	3	0	multi-exon	FALSE	canonical	3	41	junction_2	5	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56476866	True	NA	14	True	AATAAA	-19	NA	56478133	56495437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478382_56494162_56494343_56495047
transcript_76678.known	chr19	+	916	4	FSM	ENSG00000166770.12	ENST00000661902.1	916	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.3275853524323	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGATTTGTCTTCCTTATT	56476853	True	NA	14	True	AATAAA	-19	NA	56478120	56495437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478277_56491576_56491767_56494162_56494343_56495047
transcript_76679.known	chr19	+	1475	2	FSM	ENSG00000166770.12	ENST00000669162.2	1499	2	24	0	-9	0	multi-exon	FALSE	canonical	2	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTCTTCCTTATTCTT	56476913	True	NA	17	True	AATAAA	-22	NA	56478180	56495440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56478378_56494162
transcript_76680.known	chr19	-	330	3	FSM	ENSG00000267421.6	ENST00000601933.5	330	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGACAATACCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56538315	56536157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56536333_56537650_56537738_56538247
transcript_76681.known	chr19	-	413	3	FSM	ENSG00000267421.6	ENST00000590613.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGACAATACCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56538575	56536157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56536333_56537650_56537738_56538424
transcript_76682.known	chr19	-	385	3	FSM	ENSG00000267421.6	ENST00000587920.5	385	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTTGACAATACCTTTT	NA	False	NA	NA	False	AATAAA	-19	NA	56538375	56536157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56536333_56537650_56537738_56538252
transcript_76683.known	chr19	-	326	3	FSM	ENSG00000267421.6	ENST00000590579.5	326	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGACAATACCTTTTTT	NA	False	NA	NA	False	AATAAA	-21	NA	56538418	56536155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56536333_56537650_56537738_56538356
transcript_76684.known	chr19	-	2045	2	FSM	ENSG00000269696.3	ENST00000596587.2	2075	2	30	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTCCCTCACCATGCTG	-56567346	True	NA	NA	False	AATAAA	-24	NA	56567411	56545565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56547272_56567072
transcript_76685.known	chr19	-	2109	3	FSM	ENSG00000269696.3	ENST00000670254.1	2109	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCTCTGGAATCTGTGAG	-56567346	True	NA	NA	False	NA	NA	NA	56567411	56545615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_56547272_56565940_56566055_56567072
transcript_76693.known	chr19	+	1640	6	FSM	ENSG00000197016.12	ENST00000601902.5	1640	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	19.8695747312317	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCAGGTATTTCTTTACA	56566627	True	NA	NA	False	ATTAAA	-18	NA	56567525	56588911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56568039_56568757_56568884_56570279_56570372_56574393_56574521_56574637_56574734_56588225
transcript_76697.known	chr19	+	758	3	FSM	ENSG00000197951.10	ENST00000594944.1	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	36	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTCTTTTTACTTCTTC	56594235	True	NA	NA	False	NA	NA	NA	56595334	56610543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56595429_56601506_56601592_56609964
transcript_76698.nic	chr19	+	529	3	ISM	ENSG00000197951.10	ENST00000599599.7	3558	4	-29	10387	-27	3556	5prime_fragment	FALSE	canonical	3	14	junction_2	30.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAATATTTCTCACGTGTTTT	56594173	True	NA	NA	False	AATAAA	-24	NA	56595272	56614099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_56595429_56601506_56601592_56613811
transcript_76699.known	chr19	+	5428	3	FSM	ENSG00000197951.10	ENST00000328070.10	5428	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCAGTCAGTCAAGGTGGC	56594200	True	NA	NA	False	NA	NA	NA	56595299	56626481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_56595429_56601506_56601592_56621267
transcript_76700.known	chr19	+	774	3	FSM	ENSG00000083844.10	ENST00000600531.5	774	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAAGTGTCCGTTTCAAGT	57191098	True	NA	31	True	AATAAA	-40	NA	57191500	57194969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57191947_57193874_57194002_57194768
transcript_76701.known	chr19	+	1287	7	FSM	ENSG00000105146.14	ENST00000302804.12	1287	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4.32049379893857	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTCATAGTTGTGTGAG	57230954	True	NA	7	True	AATAAA	-21	NA	57231022	57235548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57231307_57231741_57231788_57232032_57232225_57232541_57232681_57233459_57233609_57234883_57235059_57235246
transcript_76702.known	chr19	+	877	6	FSM	ENSG00000105146.14	ENST00000596375.1	877	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	5.38887743412299	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGCTTCCTGAGCCCTG	57231621	True	NA	NA	False	NA	NA	NA	57231727	57235403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57231788_57232032_57232225_57232541_57232686_57233459_57233609_57234883_57235059_57235246
transcript_76704.known	chr19	+	10169	4	FSM	ENSG00000204524.7	ENST00000414468.3	10169	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	5.31245915016974	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCACTTTGATGGATCTGTC	57238608	True	NA	30	True	ATTAAA	-43	NA	57240631	57262728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57240922_57243922_57244050_57248604_57248701_57253072
transcript_76708.known	chr19	-	712	4	FSM	ENSG00000267871.6	ENST00000601567.5	712	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTGTAATAAACTATAACCAT	-57280257	True	NA	-27	True	NA	NA	NA	57280308	57267219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57267713_57276934_57277057_57278115_57278183_57280278
transcript_76709.known	chr19	+	2037	3	FSM	ENSG00000197714.9	ENST00000537645.5	2037	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATCTTTCTTATTAGTT	57278050	False	NA	NA	False	NA	NA	NA	57280050	57292534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57280125_57284550_57284678_57290698
transcript_76710.known	chr19	+	3850	3	FSM	ENSG00000197714.9	ENST00000360338.4	3850	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTATAGATATATTTGTTTT	57276576	True	NA	NA	False	AATAAA	-26	NA	57280484	57294069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57280837_57284550_57284678_57290698
transcript_76711.known	chr19	-	515	3	FSM	ENSG00000267871.6	ENST00000597601.1	515	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTGTGAACATCTTGTCACA	-57280283	True	NA	NA	False	AATGAA	-35	NA	57280334	57267375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57267713_57276934_57277057_57280278
transcript_76712.known	chr19	-	504	2	FSM	ENSG00000267871.6	ENST00000669944.1	504	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTTTGGTGATCCTGGTCT	-57280269	True	NA	-58	True	NA	NA	NA	57280320	57267250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57267713_57280278
transcript_76713.nnic	chr19	+	2362	5	NNC	ENSG00000178229.8	novel	3690	4	NA	NA	13	1564	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	10.5918600821574	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCAATTGTTTCCTTTGGC	57319518	True	NA	13	True	AATAAA	-29	NA	57320484	57332334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57320872_57323681_57323809_57326632_57326729_57327703_57329390_57332268
transcript_76715.known	chr19	+	4423	3	FSM	ENSG00000131845.15	ENST00000282286.6	4423	3	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_2	4	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGCTGAATGATATTCC	57350370	True	NA	5	True	AATAAA	-23	NA	57351270	57359898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57351698_57353724_57353852_57356029
transcript_76717.known	chr19	+	2754	4	FSM	ENSG00000152433.15	ENST00000282282.4	2754	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	1.63299316185545	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCATTCTGTAGCCCTTGG	57361376	True	NA	NA	False	AAAACA	-22	NA	57363550	57379565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57363704_57368543_57368580_57371781_57371909_57377127
transcript_76719.known	chr19	+	589	4	FSM	ENSG00000188785.12	ENST00000597400.5	589	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	33.7441352929167	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTCATCCTGAGCAACACA	57388941	True	NA	NA	False	NA	NA	NA	57389874	57398598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57390115_57394187_57394224_57397047_57397175_57398412
transcript_76721.known	chr19	+	2714	4	FSM	ENSG00000186272.13	ENST00000307658.12	2714	4	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	2.44948974278318	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGGGGAAGTGTCCTGAG	57410371	True	NA	29	True	AATAAA	-26	NA	57411160	57421934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57413595_57413637_57417911_57418039_57419634
transcript_76725.known	chr19	+	533	3	FSM	ENSG00000186272.13	ENST00000595206.1	533	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	8.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGACAGTGTTCACCTGGC	57410391	True	NA	NA	False	NA	NA	NA	57411180	57419900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57413595_57413637_57419634
transcript_76727.known	chr19	+	2524	3	FSM	ENSG00000186272.13	ENST00000601808.1	2524	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	10	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTTCTTGTGGTTTATTT	57410389	True	NA	10	True	AAGAAA	-12	NA	57411178	57421803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57417911_57418039_57419634
transcript_76735.known	chr19	-	737	3	FSM	ENSG00000197128.13	ENST00000600175.5	737	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGGCAGTTAGGTCACA	-57475928	True	NA	NA	False	NA	NA	NA	57477551	57466662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57467086_57476633_57476673_57477276
transcript_76736.known	chr19	-	1601	3	FSM	ENSG00000197128.13	ENST00000425074.3	1601	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGAGGTTCTTCCGAGTGC	-57475943	True	NA	NA	False	NA	NA	NA	57477566	57473149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57474422_57476633_57476673_57477276
transcript_76738.known	chr19	+	744	2	FSM	ENSG00000256060.3	ENST00000543226.2	744	2	0	0	0	0	multi-exon	FALSE	canonical	3	342	junction_1	0	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTACATTCTGTCTCATGT	57361376	True	NA	61	True	AATGAA	-21	NA	57363550	57365405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57363704_57364814
transcript_76741.known	chr19	+	433	2	FSM	ENSG00000186272.13	ENST00000599867.1	433	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAAGCTTTACCTGCACCAA	57410373	True	NA	NA	False	NA	NA	NA	57411162	57419823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57411407_57419634
transcript_76743.known	chr19	+	677	2	FSM	ENSG00000186230.7	ENST00000597296.1	677	2	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_1	0	1253	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTTTCGTCTTAAGTTT	57431331	True	NA	17	True	TTTAAA	-4	NA	57435346	57438457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435668_57438101
transcript_76744.known	chr19	+	459	2	FSM	ENSG00000186230.7	ENST00000600697.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTTCGTCTTAAGTT	57431404	False	NA	16	True	TTTAAA	-3	NA	57435419	57438456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435524_57438101
transcript_76745.known	chr19	+	568	2	FSM	ENSG00000186230.7	ENST00000415248.1	568	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACGCAGGGTGGCAAGGA	57431327	True	NA	NA	False	NA	NA	NA	57435342	57443607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57435594_57443290
transcript_76746.known	chr19	-	482	2	FSM	ENSG00000197128.13	ENST00000601768.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAGGCACAGAAGAACACAAC	-57475881	True	NA	NA	False	NA	NA	NA	57477504	57466831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57467086_57477276
transcript_76747.known	chr19	+	1743	1	FSM	ENSG00000256060.3	ENST00000596755.1	1743	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	102	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTACATTGTAAATTACT	57361392	True	NA	20	True	AATAAA	-32	NA	57363566	57365309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57363600_57365300
transcript_76748.known	chr19	+	513	2	FSM	ENSG00000268266.1	ENST00000594562.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAAAACTCGTCTCCGCAAAA	57477686	True	NA	NA	False	NA	NA	NA	57477698	57482005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57478087_57481880
transcript_76751.known	chr19	+	1857	4	FSM	ENSG00000105136.22	ENST00000442920.6	1857	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	13.7679176187089	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACAATGTGGACAATGTAGT	57486825	True	NA	NA	False	NA	NA	NA	57487717	57494220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57491470_57491598_57492112_57492212_57492855
transcript_76752.nnic	chr19	+	797	4	NNC	ENSG00000105136.22	novel	1857	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_3	21.7460085737335	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATTTCCAGAGACTGA	57486825	True	NA	24	True	AATAAA	-24	NA	57487717	57494672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57487984_57491470_57491598_57492112_57492212_57494367
transcript_76753.known	chr19	+	2277	4	FSM	ENSG00000152439.13	ENST00000282292.9	2277	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	15.5205956357638	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCACACTGGAGGCAGGAT	57499283	True	NA	NA	False	NA	NA	NA	57499937	57508229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57500114_57504656_57504787_57505301_57505401_57506357
transcript_76754.known	chr19	+	561	3	FSM	ENSG00000105136.22	ENST00000521754.5	561	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTCCTGATCAGCTCAGG	57486860	True	NA	NA	False	NA	NA	NA	57487752	57493055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57487984_57491467_57491598_57492855
transcript_76755.nnic	chr19	+	698	3	NNC	ENSG00000105136.22	novel	1857	4	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	28	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACCATTTCCAGAGACTGA	57486825	True	NA	24	True	AATAAA	-24	NA	57487717	57494672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57487984_57491470_57491598_57494367
transcript_76757.known	chr19	-	4305	6	FSM	ENSG00000251369.9	ENST00000447310.5	4305	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	25.8116252878427	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTTTGACTTGTTAGG	-57558531	True	NA	-3	True	ATTAAA	-17	NA	57559863	57541839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57543244_57543650_57544584_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_76760.known	chr19	-	3376	5	FSM	ENSG00000251369.9	ENST00000457177.5	3376	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	16.1477552619551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGACTTGTTAGGATTT	-57558531	True	NA	1	True	ATTAAA	-21	NA	57559863	57541835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57543244_57546456_57547994_57552626_57552723_57556230_57556358_57559655
transcript_76761.nnic	chr19	-	2004	5	NNC	ENSG00000251369.9	novel	3376	5	NA	NA	-5	-2	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	29.0645832586672	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGACTTGTTAGGAT	-57558536	True	NA	-1	True	ATTAAA	-19	NA	57559868	57541837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_57543244_57547831_57547994_57552626_57552723_57556230_57556358_57559655
transcript_76764.known	chr19	+	4090	4	FSM	ENSG00000121406.9	ENST00000376233.8	4090	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	1.88561808316413	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCTAATTTGTCTGTT	57526563	True	NA	2	True	AATGAA	-17	NA	57527355	57540876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57537203
transcript_76765.known	chr19	+	5505	4	FSM	ENSG00000121406.9	ENST00000602149.1	5505	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	29.743346594939	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGGTGCTGGTGTGGGTC	57526633	True	NA	NA	False	AATAAA	-18	NA	57527425	57557542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57527607_57531069_57531109_57535143_57535271_57552384
transcript_76766.nnic	chr19	-	1842	4	NIC	ENSG00000251369.9	novel	3376	5	NA	NA	-5	-2	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	30.8004328973907	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGACTTGTTAGGAT	-57558536	True	NA	-1	True	ATTAAA	-19	NA	57559868	57541837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57543244_57552626_57552723_57556230_57556358_57559655
transcript_76772.known	chr19	+	720	4	FSM	ENSG00000171649.12	ENST00000600053.5	720	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	65.4879123706556	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACCATCACCAGCACCA	57583374	True	NA	NA	False	NA	NA	NA	57583609	57590198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57583976_57584951_57584991_57588538_57588666_57590010
transcript_76774.known	chr19	+	4291	4	FSM	ENSG00000171649.12	ENST00000597850.2	4291	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	37.6061460697879	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATGTTGAAACTTTACTC	57582447	True	NA	18	True	AATAAA	-18	NA	57584144	57593890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584390_57584951_57584991_57588538_57588666_57590010
transcript_76775.nic	chr19	+	2477	4	NIC	ENSG00000171649.12	novel	4291	4	NA	NA	-18	-560	combination_of_known_junctions	FALSE	canonical	3	44	junction_1	47.932823363073	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTAGTCTTGGGGTTCTG	57582424	True	NA	15	True	AATAAA	-20	NA	57584121	57591830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57584613_57584951_57584991_57588538_57588666_57590010
transcript_76777.known	chr19	+	2860	3	FSM	ENSG00000171649.12	ENST00000599456.1	2860	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	53.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	57584247	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584613_57588538_57588666_57590010
transcript_76778.known	chr19	+	4144	3	FSM	ENSG00000171649.12	ENST00000536878.6	4144	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	66.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGTTGCCACCTGTATAT	57582442	True	NA	-95	True	NA	NA	NA	57584139	57593777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584390_57588538_57588666_57590010
transcript_76780.known	chr19	+	2510	2	FSM	ENSG00000171649.12	ENST00000307468.4	2510	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATAGGACCTAGAAATCT	57584247	False	NA	NA	False	TATAAA	-41	NA	57584259	57592390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57584390_57590010
transcript_76782.nnic	chr19	+	1418	5	NNC	ENSG00000183647.11	novel	634	4	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_4	11.2555541844904	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599013	True	NA	NA	False	AATAAA	-29	NA	57599876	57612722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_57600135_57600727_57600780_57604276_57604407_57605685_57606444_57612502
transcript_76783.known	chr19	+	4845	4	FSM	ENSG00000183647.11	ENST00000597700.6	4845	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.55902608401044	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAACTTGATAAGTTCTGACA	57599021	True	NA	9	True	AATAAA	-21	NA	57599884	57610098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57605685
transcript_76785.known	chr19	+	634	4	FSM	ENSG00000183647.11	ENST00000597864.1	634	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	9.62635271879577	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599039	True	NA	NA	False	AATAAA	-29	NA	57599902	57612722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57600135_57600727_57600780_57604276_57604407_57612502
transcript_76789.nic	chr19	+	601	3	NIC	ENSG00000183647.11	novel	2742	4	NA	NA	-1	0	combination_of_known_junctions	FALSE	canonical	3	5	junction_1	2.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599020	True	NA	NA	False	AATAAA	-29	NA	57599883	57612722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57600135_57604276_57604407_57612502
transcript_7679.nic	chr1	-	1922	18	NIC	ENSG00000174842.17	novel	2006	19	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_7	86.1032212282581	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	92299035	92246491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92264553_92264639_92266418_92266493_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_76790.nnic	chr19	+	487	2	NIC	ENSG00000183647.11	novel	2742	4	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599004	True	NA	NA	False	AATAAA	-29	NA	57599867	57612722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57600135_57612502
transcript_76791.known	chr19	+	2742	4	FSM	ENSG00000183647.11	ENST00000600619.1	2742	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	13.6707311029399	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCTGCTTGTAGTCATAGTT	57599021	True	NA	NA	False	AATAAA	-29	NA	57599884	57612722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57600135_57604276_57604407_57605685_57607828_57612502
transcript_76792.known	chr19	+	590	4	FSM	ENSG00000213762.12	ENST00000600883.1	590	4	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	112.197246945824	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACACCAGGGTACACACCAT	57606414	True	NA	NA	False	NA	NA	NA	57614255	57620318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57614504_57618791_57618878_57619411_57619509_57620159
transcript_76795.known	chr19	+	4924	3	FSM	ENSG00000213762.12	ENST00000396161.10	4924	3	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_1	16	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGACTCGTCACTGAATT	57606400	True	NA	18	True	AATAAA	-21	NA	57614241	57624724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57614504_57619411_57619509_57620159
transcript_76798.known	chr19	+	559	2	FSM	ENSG00000213762.12	ENST00000597975.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGAGGCCTCAATTGTG	57606391	True	NA	NA	False	NA	NA	NA	57614232	57620447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57614504_57620159
transcript_76800.known	chr19	+	2759	6	FSM	ENSG00000121417.14	ENST00000540556.5	2759	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	16.3266653055668	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631837	True	NA	15	True	AATAAA	-16	NA	57633180	57642764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57633785_57633906_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_76802.known	chr19	+	2641	5	FSM	ENSG00000121417.14	ENST00000535785.1	2641	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	23.4773827331754	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTACCTTTATCTTGGCATT	57631872	True	NA	15	True	AATAAA	-16	NA	57633215	57642764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57633712_57633906_57634022_57634062_57634628_57634756_57640703
transcript_76804.known	chr19	+	2577	5	FSM	ENSG00000121417.14	ENST00000299871.9	2577	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	17.4212513901843	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TACAATAATAAAAGCATTAT	57631872	True	NA	-12	True	NA	NA	NA	57633215	57642737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57639911_57640068_57640703
transcript_76805.known	chr19	+	3773	4	FSM	ENSG00000121417.14	ENST00000240731.5	3773	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	19.3045763140937	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATTCTTCATATGTGCATT	57631824	True	NA	8	True	AATAAA	-16	NA	57633167	57644041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57634022_57634062_57634628_57634756_57640703
transcript_76806.known	chr19	+	2629	4	FSM	ENSG00000121417.14	ENST00000541801.5	2629	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	8.5764535535124	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	57631823	True	NA	30	True	AATAAA	-31	NA	57633166	57642779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57634628_57634756_57639911_57640068_57640703
transcript_76807.known	chr19	+	2472	3	FSM	ENSG00000121417.14	ENST00000347302.7	2472	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	22.5	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTTGATTCACTCTTTGA	57631824	True	NA	30	True	AATAAA	-31	NA	57633167	57642779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57633437_57634628_57634756_57640703
transcript_7681.known	chr1	-	1833	18	FSM	ENSG00000174842.17	ENST00000495106.5	1833	18	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	90.7193092984331	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCATTATGATTCATTTA	-92295723	True	NA	-19	True	AATAAA	-20	NA	92298987	92246489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92246647_92247061_92247145_92247877_92247990_92262862_92262927_92263622_92263733_92266418_92266493_92266699_92266742_92267912_92268003_92268104_92268136_92269722_92269777_92271464_92271653_92286489_92286593_92288913_92289152_92290197_92290307_92291417_92291538_92297403_92297530_92297960_92298030_92298924
transcript_76812.known	chr19	-	2567	5	FSM	ENSG00000179909.16	ENST00000451275.1	2567	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	14.7478812037526	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-57707326	True	NA	0	True	NA	NA	NA	57709194	57697366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57697842_57700987_57701146_57701237_57702789_57704852_57704980_57708938
transcript_76819.known	chr19	-	5687	4	FSM	ENSG00000179909.16	ENST00000512439.6	5687	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	13.2748718344933	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATGTGGCTTATTGAATCT	-57707300	True	NA	0	True	NA	NA	NA	57709168	57697366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57701146_57701237_57702789_57704852_57704980_57708938
transcript_76820.known	chr19	-	2431	4	FSM	ENSG00000083814.13	ENST00000317398.10	2431	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	3.68178700572909	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-57726638	True	NA	-2	True	AATAAA	-22	NA	57727624	57719750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57727390
transcript_76821.known	chr19	+	4560	3	FSM	ENSG00000204519.11	ENST00000282296.10	4560	3	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_2	9	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTTCTTTATATGGATA	57679264	True	NA	22	True	AATAAA	-20	NA	57681976	57690648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57682245_57685261_57685386_57686480
transcript_76822.known	chr19	+	469	3	FSM	ENSG00000204519.11	ENST00000596085.1	469	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	42	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAACCATCAGCAGTCAAAC	57679322	True	NA	NA	False	NA	NA	NA	57682034	57717301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57682245_57685261_57685386_57717166
transcript_76823.nic	chr19	+	1689	3	NIC	ENSG00000152443.13	novel	5262	3	NA	NA	-10	-2	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	30.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGAATGCAATTCTTCA	57743860	True	NA	15	True	AATAAA	-16	NA	57746804	57758146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57747092_57750784_57750912_57756871
transcript_76824.known	chr19	-	6907	3	FSM	ENSG00000179909.16	ENST00000684351.1	6907	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_2	3.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGGATGGAATTTTTGGAA	-57707336	True	NA	NA	False	GGGGCT	-31	NA	57709204	57696274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57702789_57704852_57704980_57708938
transcript_76825.known	chr19	+	593	2	FSM	ENSG00000204519.11	ENST00000599402.1	593	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCCCCCACGGACCTAC	57679294	True	NA	NA	False	NA	NA	NA	57682006	57686835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57682245_57686480
transcript_76826.known	chr19	+	5262	3	FSM	ENSG00000152443.13	ENST00000317178.10	5262	3	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_2	6.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATGCAATTCTTCATA	57743870	True	NA	17	True	AATAAA	-18	NA	57746814	57758148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57747092_57750784_57750912_57753290
transcript_76827.known	chr19	-	2903	4	FSM	ENSG00000083814.13	ENST00000600125.5	2903	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	18.263503375737	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGTTGTGGGTTCTGTT	-57726627	True	NA	-2	True	AATAAA	-22	NA	57727613	57719750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57721698_57722315_57722439_57723213_57723341_57726907
transcript_76847.known	chr19	-	757	5	FSM	ENSG00000204514.11	ENST00000597348.5	757	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	72.6476943887416	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-57884218	True	NA	-1	True	AATAAA	-31	NA	57889037	57864757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57864924_57868457_57868580_57875155_57875227_57876915_57877043_57888766
transcript_76857.known	chr19	+	1670	4	FSM	ENSG00000269343.9	ENST00000594328.1	1670	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	12.2836838484589	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTACACCAGAGAATTCACA	57811063	True	NA	NA	False	NA	NA	NA	57819740	57842119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57820493_57820550_57839022_57839150_57840837
transcript_76860.known	chr19	+	769	4	FSM	ENSG00000268750.7	ENST00000596498.2	769	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	21.3124898175277	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGACGTTCTGCCCAGTTCA	57811048	True	NA	NA	False	NA	NA	NA	57819725	57858941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57820493_57820550_57856106_57856234_57858575
transcript_76872.known	chr19	-	648	4	FSM	ENSG00000204514.11	ENST00000597342.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	40.1081870279207	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGACGGCTCTGCGTG	-57884139	True	NA	-7	True	AATAAA	-17	NA	57888958	57850319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57850562_57876915_57877043_57885882_57885970_57888766
transcript_76885.known	chr19	-	461	4	FSM	ENSG00000204514.11	ENST00000600634.5	461	4	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_1	76.3675323681471	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTTCAGTGTGTGTGGTC	-57883998	False	4819	-2	True	AATAAA	-30	NA	57888817	57864758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57864920_57868457_57868580_57876915_57877043_57888766
transcript_76890.known	chr19	-	389	4	FSM	ENSG00000204514.11	ENST00000595048.5	389	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	81.4916491972576	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATACTCTTCAGTGTGT	-57883961	False	NA	-8	True	AATAAA	-24	NA	57888780	57864764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57864920_57868486_57868580_57876915_57877043_57888766
transcript_76895.nic	chr19	+	602	3	NIC	ENSG00000083828.16	novel	2695	4	NA	NA	-15	-1981	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	9	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGAGAGCTGTATTTACA	57768239	True	NA	17	True	AATAAA	-27	NA	57769639	57791747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_57769879_57790273_57790401_57791511
transcript_76896.known	chr19	+	2196	3	FSM	ENSG00000083828.16	ENST00000396154.7	2196	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	4.5	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCTTTTCTCATACTTTAC	57768275	True	NA	47	True	NA	NA	NA	57769675	57780616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57769879_57776542_57776670_57778750
transcript_76899.known	chr19	+	3003	3	FSM	ENSG00000269343.9	ENST00000651253.2	3003	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	10.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACCTATTTCGTATTCTAG	57811043	True	NA	NA	False	NA	NA	NA	57819720	57843488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57839022_57839150_57840837
transcript_76902.nnic	chr19	+	615	3	Fusion	ENSG00000269343.9_ENSG00000198466.12	novel	1670	4	NA	NA	-10	-9	multi-exon	FALSE	canonical	3	10	junction_2	13	68	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGGGAGTGCCTGGGGAG	57811033	True	NA	9	True	CATAAA	-14	NA	57819710	57854099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr19_+_57819946_57820493_57820550_57853775
transcript_76903.known	chr19	+	606	3	FSM	ENSG00000268750.7	ENST00000598031.1	606	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	29	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGCCATTTGTCTTCCGC	57811128	True	NA	NA	False	AAGAAA	-20	NA	57819805	57858911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57856103_57856234_57858575
transcript_76904.known	chr19	+	580	3	FSM	ENSG00000268750.7	ENST00000603271.1	580	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	21.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTCATCAGCACCAGAAGC	57811053	True	NA	NA	False	NA	NA	NA	57819730	57858813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57819946_57856106_57856234_57858575
transcript_76905.known	chr19	+	5794	3	FSM	ENSG00000269343.9	ENST00000594901.2	5794	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	7.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	57828253	True	NA	17	True	AATAAA	-17	NA	57830298	57846238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57830565_57839022_57839150_57840837
transcript_76910.known	chr19	-	2352	3	FSM	ENSG00000178935.5	ENST00000391701.1	2352	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	0.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	-57813196	True	NA	-4	True	AATAAA	-17	NA	57814913	57807081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57809104_57813293_57813421_57814710
transcript_76918.known	chr19	-	528	3	FSM	ENSG00000204514.11	ENST00000596604.5	528	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	44	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884101	False	NA	-2	True	AATAAA	-22	NA	57888920	57850314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57850562_57876915_57877043_57888766
transcript_76924.nnic	chr19	-	594	3	NIC	ENSG00000204514.11	novel	461	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	90.5	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCAGTGTGTGTGGTCA	-57884252	True	NA	-1	True	AATAAA	-31	NA	57889071	57864757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57864920_57876915_57877043_57888766
transcript_76930.known	chr19	-	6244	3	FSM	ENSG00000204514.11	ENST00000435989.7	6244	3	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	67.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCTCGTA	-57884218	True	NA	-4	True	AATAAA	-17	NA	57889037	57869380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57875227_57876915_57877043_57888766
transcript_76931.known	chr19	+	1977	2	FSM	ENSG00000083828.16	ENST00000396150.4	1977	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGTGTTATAATAAAGG	57768295	True	NA	-25	True	NA	NA	NA	57769695	57780544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57769879_57778750
transcript_76933.known	chr19	-	679	2	FSM	ENSG00000269867.1	ENST00000597780.1	679	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGACAAGGATCTAGCTCTG	-57868146	False	NA	NA	False	AGTAAA	-35	NA	57868172	57867037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57867395_57867850
transcript_76934.nnic	chr19	-	551	2	NIC	ENSG00000204514.11	novel	528	3	NA	NA	4	0	combination_of_known_splicesites	FALSE	canonical	3	89	junction_1	0	416	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACGGCTCTGCGTGAATTA	-57884251	True	NA	-2	True	AATAAA	-22	NA	57889070	57850314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57850562_57888766
transcript_76935.known	chr19	-	909	2	FSM	ENSG00000204514.11	ENST00000595295.1	909	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAAGATGGGGCTTCTT	-57884002	False	4819	NA	False	NA	NA	NA	57888821	57858129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57858984_57888766
transcript_76938.known	chr19	-	771	2	FSM	ENSG00000204514.11	ENST00000597807.1	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTCATGGGCTGTCA	-57884150	True	NA	NA	False	NA	NA	NA	57888969	57876474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57877043_57888766
transcript_76940.known	chr19	+	3339	4	FSM	ENSG00000269343.9	ENST00000442832.8	3339	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.3059533657621	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGGGTGCTCTCCTGCA	57828249	True	NA	17	True	AATAAA	-17	NA	57830294	57846238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57830565_57839022_57839150_57840837_57841797_57844255
transcript_76941.known	chr19	+	545	2	FSM	ENSG00000198466.12	ENST00000484707.1	545	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTGGGGAGTTTCATTCA	57848287	True	NA	18	True	CATAAA	-23	NA	57849859	57854108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57850072_57853775
transcript_76942.known	chr19	+	6885	3	FSM	ENSG00000198466.12	ENST00000339656.8	6885	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	25	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATACCTCTTTCCTGT	57848286	True	NA	16	True	ATTAAA	-28	NA	57849858	57865117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_57850072_57856103_57856234_57858575
transcript_76943.known	chr19	-	4685	3	FSM	ENSG00000173480.11	ENST00000312026.6	4685	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	21.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACCGTGCTTCATCAAT	-57914255	True	NA	-1	True	NA	NA	NA	57916592	57905773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57910115_57912059_57912190_57916378
transcript_76944.known	chr19	-	1703	3	FSM	ENSG00000178935.5	ENST00000596248.1	1703	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	11	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGTCCTTACAAGTAAAAT	-57813196	True	NA	NA	False	NA	NA	NA	57814913	57807908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57809104_57813293_57813421_57814532
transcript_76945.known	chr19	-	1975	3	FSM	ENSG00000173480.11	ENST00000595559.1	1975	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	19.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAGGCCTTATGAGTGCTG	-57914254	True	NA	NA	False	ATTAAA	-22	NA	57916591	57908479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57910115_57912059_57912187_57916378
transcript_76952.nic	chr19	-	924	7	NIC	ENSG00000196724.13	novel	597	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	19.3168032782055	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-57933328	True	NA	-10	True	AATAAA	-14	NA	57935405	57922265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930555_57933816_57933903_57935079_57935136_57935283
transcript_76958.known	chr19	-	597	6	FSM	ENSG00000196724.13	ENST00000600989.5	597	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	14.0228385143665	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTTCTTGTGAATTACA	-57935165	False	NA	NA	False	NA	NA	NA	57935176	57922430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930555_57933816_57933903_57935160
transcript_76960.nic	chr19	-	1020	6	NIC	ENSG00000196724.13	novel	3547	7	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	14.0228385143665	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-57935420	False	NA	-10	True	AATAAA	-14	NA	57935431	57922265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57922630_57923191_57923290_57927976_57928048_57930427_57930558_57933816_57933903_57935160
transcript_76965.nnic	chr19	-	927	5	NIC	ENSG00000196724.13	novel	597	6	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	21.1704392963396	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGGACTCATGCCTTTAAT	-57935420	False	NA	-5	True	AATAAA	-19	NA	57935431	57922260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_-_57922630_57927976_57928048_57930427_57930558_57933816_57933903_57935160
transcript_76977.known	chr19	-	3547	7	FSM	ENSG00000196724.13	ENST00000425570.7	3547	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	20.1301321958457	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTACAGGGACTCATGCCT	-57933310	True	NA	-10	True	AATAAA	-14	NA	57935387	57922265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57922630_57923191_57923290_57925622_57928048_57930427_57930558_57932429_57932647_57933816_57933903_57935160
transcript_76981.known	chr19	-	2207	3	FSM	ENSG00000152454.4	ENST00000282308.4	2207	3	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	1.5	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTTTTATATTTAGTAT	-57944598	True	NA	-15	True	AATAAA	-21	NA	57947706	57940832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57942648_57943933_57944061_57947441
transcript_76982.known	chr19	-	1958	2	FSM	ENSG00000152454.4	ENST00000598928.1	1958	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTTAGGTAACACACATAG	-57944567	True	NA	-106	True	AAAACA	-23	NA	57947675	57940923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57942648_57947441
transcript_76983.known	chr19	-	915	6	FSM	ENSG00000177025.3	ENST00000314391.3	915	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.69041575982343	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGCTTATTGGCTCTCA	NA	False	NA	-6	True	AATAAA	-18	NA	57974534	57958436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57958718_57961390_57961552_57966529_57966633_57972462_57972505_57974098_57974204_57974311
transcript_76984.known	chr19	-	4087	7	FSM	ENSG00000166704.13	ENST00000551380.7	4080	7	-7	0	-7	0	multi-exon	FALSE	canonical	3	57	junction_1	13.0437298687488	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	-58002027	True	NA	-23	True	AATAAA	-25	NA	58002827	57977075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002395
transcript_76985.known	chr19	-	4225	7	FSM	ENSG00000166704.13	ENST00000341164.9	4225	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_6	26.0496321151246	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAAGTTACCTGGTTTCTCT	NA	False	NA	-23	True	AATAAA	-25	NA	58003349	57977075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_57980280_57988206_57988303_57988594_57988722_57999807_57999897_58000682_58000740_58001288_58001371_58002779
transcript_76987.known	chr19	+	1919	4	FSM	ENSG00000176593.8	ENST00000313957.8	1919	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	2.62466929133727	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAACGGGGGTGTCTTTT	58001935	True	NA	NA	False	ATTAAA	-10	NA	58002871	58007206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210_58003337_58004382_58004701_58005906
transcript_76996.known	chr19	+	2310	3	FSM	ENSG00000176593.8	ENST00000546949.5	2310	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGATTCTACTCCTGTTTGT	58001953	True	NA	NA	False	TATAAA	-29	NA	58002889	58006409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210_58003337_58004382
transcript_76998.known	chr19	+	6438	3	FSM	ENSG00000176593.8	ENST00000550135.5	6438	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	6.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTTCCTAAGGACACGCAT	NA	False	NA	24	True	AATAAA	-24	NA	58002060	58011232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210_58003337_58005906
transcript_76999.known	chr19	+	1096	2	FSM	ENSG00000176593.8	ENST00000546956.1	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCAGAGGGAGAGGAAAAGTT	58001965	True	NA	NA	False	NA	NA	NA	58002901	58004161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58003047_58003210
transcript_77.known	ERCC-00160	+	727	1	FSM	ERCC-00160A	DQ883658	727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	635	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00160_+_0_700
transcript_77002.nnic	chr19	-	586	2	Genic_Genomic	ENSG00000288830.1	novel	794	1	NA	NA	-17	12442	multi-exon	FALSE	canonical	2	4	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATGTTCTTAGCTCCCA	-58055076	True	NA	NA	False	AATAAA	-14	NA	58055373	58042120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_58042545_58055211
transcript_77003.nnic	chr19	-	531	2	Genic_Genomic	ENSG00000288830.1	novel	794	1	NA	NA	-17	12387	multi-exon	FALSE	canonical	2	4	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCTGTGCTAACATTCTTA	-58055076	True	NA	NA	False	AATAAA	-35	NA	58055373	58042175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr19_-_58042545_58055211
transcript_77004.known	chr19	+	813	3	FSM	ENSG00000152467.10	ENST00000601162.1	813	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	3	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCGTCCATCTGTCCTGTGG	58033925	True	NA	3	True	ATTAAA	-18	NA	58034105	58038442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58034162_58035969_58036012_58037727
transcript_77006.known	chr19	+	3334	5	FSM	ENSG00000176293.20	ENST00000313434.10	3334	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	10.1980390271856	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCATTGGCTGTTTTTGGT	58058533	True	NA	NA	False	NA	NA	NA	58059281	58069755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58066740
transcript_77007.nnic	chr19	+	475	5	NNC	ENSG00000176293.20	novel	3334	5	NA	NA	11	4260	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_4	8.87059749960509	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCATCCTCAGGTATTC	58058501	True	NA	NA	False	AATAAA	-18	NA	58059249	58074015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445_58063542_58073891
transcript_77008.nnic	chr19	+	425	4	NNC	ENSG00000176293.20	novel	3346	4	NA	NA	-6	4260	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	11.8977121983832	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACCCATCCTCAGGTATTC	NA	False	NA	NA	False	AATAAA	-18	NA	58059232	58074015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58059311_58061579_58061707_58063445_58063542_58073891
transcript_77009.nic	chr19	+	605	4	ISM	ENSG00000176293.20	ENST00000313434.10	3334	5	-32	5960	11	-4835	5prime_fragment	FALSE	canonical	3	12	junction_1	8.64098759787715	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGATTGTGATGAATGCCGA	58058501	True	NA	NA	False	AATAAA	-39	NA	58059249	58063795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_+_58059311_58059968_58060036_58061579_58061707_58063445
transcript_77013.known	chr19	-	761	3	FSM	ENSG00000121413.13	ENST00000600845.1	761	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	41.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGCCCAGCTAGCCTG	-58095444	True	NA	NA	False	NA	NA	NA	58098203	58088687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58088838_58089864_58090387_58098114
transcript_77014.nic	chr19	-	1799	3	ISM	ENSG00000121413.13	ENST00000594191.5	1042	4	-18	544	-18	0	5prime_fragment	FALSE	canonical	3	73	junction_2	30.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	-58095490	True	NA	NA	False	TTTAAA	-26	NA	58098249	58087636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_58088838_58089864_58090387_58098173
transcript_77015.known	chr19	-	1768	2	FSM	ENSG00000121413.13	ENST00000595944.1	1768	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACAGCACATGTGTTTA	-58118373	True	NA	NA	False	TATAAA	-18	NA	58118427	58107615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58109304_58118347
transcript_77016.known	chr19	-	2004	3	FSM	ENSG00000121413.13	ENST00000600318.1	2004	3	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_2	60	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTCCATGAATCCAGTGG	-58095451	True	NA	NA	False	TTTAAA	-26	NA	58098210	58087636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58088838_58089864_58090387_58097929
transcript_77020.nnic	chr19	-	566	4	NNC	ENSG00000181894.15	novel	3501	4	NA	NA	-17	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	1.24721912892465	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTATCATATTTTTTTC	-58150014	False	792	-4	True	AATAAA	-26	NA	58150806	58126327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_58126700_58142616_58142662_58143104_58143199_58150751
transcript_77022.known	chr19	-	3290	2	FSM	ENSG00000181894.15	ENST00000358067.5	3290	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTGTATCATATTTTTT	-58141909	False	NA	-6	True	AATAAA	-24	NA	58142664	58126329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58129512_58142556
transcript_77023.known	chr19	+	2447	8	FSM	ENSG00000171606.18	ENST00000326804.8	2447	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	42.0301155392761	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGTGTAGAACCTGTGT	58182068	True	NA	23	True	AATAAA	-12	NA	58183426	58213552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58183443_58183920_58183999_58185696_58185839_58186946_58187043_58206719_58207203_58209960_58210074_58211559_58211687_58212160
transcript_77031.nnic	chr19	+	923	5	NNC	ENSG00000171606.18	novel	1646	6	NA	NA	-3	-3376	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_4	47.5677148915102	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGTGGCTCAGTCCTGTAAT	58182500	True	NA	9	True	ATTAAA	-22	NA	58183083	58199092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58198829
transcript_77032.nic	chr19	+	902	5	NIC	ENSG00000171606.18	novel	1646	6	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_4	49.8315913853852	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTCAGTGAATTTGTTTC	58182500	True	NA	NA	False	ATTAAA	-13	NA	58183083	58202468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58202226
transcript_77033.nnic	chr19	+	566	5	NNC	ENSG00000171606.18	novel	1646	6	NA	NA	4	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	49.4519969263123	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTCAGTGAATTTGTTTCA	58182820	False	NA	NA	False	ATTAAA	-14	NA	58183403	58202469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58183443_58183920_58183999_58185711_58185839_58186946_58187043_58202243
transcript_77069.known	chr19	+	555	7	FSM	ENSG00000198131.15	ENST00000597240.5	555	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	75.0192567871003	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGGCTCACCACAACCTCCA	58224938	True	NA	NA	False	NA	NA	NA	58228913	58247328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58247281
transcript_77078.nnic	chr19	+	750	7	NNC	ENSG00000198131.15	novel	555	7	NA	NA	-8	-2648	at_least_one_novel_splicesite	TRUE	canonical	3	46	junction_6	62.030682372158	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCATTTGTGGTATGTTGT	58224930	True	NA	12	True	AATAAA	-19	NA	58228905	58274599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58274365
transcript_77081.known	chr19	+	588	7	FSM	ENSG00000198131.15	ENST00000594384.5	588	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	60.9562684772179	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTATTAGGAAAAGTGCAAG	58224938	True	NA	4	True	NA	NA	NA	58228913	58260965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58228947_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_77097.known	chr19	+	3516	7	FSM	ENSG00000198131.15	ENST00000596825.5	3516	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	73.7829022651364	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGAGTCTGCAGTTTCT	58224999	True	NA	NA	False	AATAAA	-18	NA	58228974	58263644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58229257_58229467_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246745_58246795_58260850
transcript_7710.nic	chr1	-	590	3	ISM	ENSG00000174842.17	ENST00000495106.5	1833	18	-48	50630	-48	401	5prime_fragment	FALSE	canonical	3	303	junction_2	16.5	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAAAAGAAACAGTCAT	NA	False	NA	NA	False	NA	NA	NA	92299035	92297119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_92297530_92297960_92298030_92298924
transcript_7711.known	chr1	-	572	2	FSM	ENSG00000174842.17	ENST00000487911.1	572	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGAGCAAGACTTTAAAGA	-92295723	True	NA	NA	False	NA	NA	NA	92298987	92297520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92298030_92298924
transcript_77114.known	chr19	-	2512	5	FSM	ENSG00000283103.4	ENST00000634676.2	2512	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	154.753029049515	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTTTATCTCTTTGTCTT	-58323722	True	NA	NA	False	NA	NA	NA	58326935	58310351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58312289_58312969_58313114_58314805_58315037_58325274_58325362_58326822
transcript_77117.nic	chr19	+	571	4	NIC	ENSG00000198131.15	novel	218	3	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_3	98.7162037807821	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTGGTGTGTTTTTTG	58224931	True	NA	NA	False	ATTAAA	-32	NA	58228906	58231820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_58229257_58229467_58229571_58230393_58230463_58231771
transcript_77119.known	chr19	+	9110	4	FSM	ENSG00000278129.2	ENST00000621650.2	9110	4	0	0	0	0	multi-exon	TRUE	canonical	3	41	junction_3	8.05536398239638	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATGTGTGCAGACTGT	58275330	True	NA	14	True	AATAAA	-14	NA	58278954	58302791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58279148_58285716_58285844_58286109_58286206_58294097
transcript_7713.known	chr1	-	769	3	FSM	ENSG00000174842.17	ENST00000471465.1	769	3	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_1	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCCATTATGATTCATT	NA	False	NA	-21	True	AATAAA	-18	NA	92248408	92246491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92246647_92247061_92247145_92247877
transcript_77131.known	chr19	-	614	4	FSM	ENSG00000283103.4	ENST00000666049.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	149.942211090362	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	-58326869	False	NA	-29	True	AATAAA	-20	NA	58326967	58314787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58315037_58322361_58322495_58325274_58325362_58326822
transcript_77133.known	chr19	+	4654	3	FSM	ENSG00000182318.6	ENST00000329665.5	4654	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAAGTGTAAAGACAAATTC	58326467	True	NA	4	True	AATAAA	-20	NA	58326993	58342332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58327115_58334751_58335206_58338253
transcript_77143.nnic	chr19	-	856	3	NNC	ENSG00000283103.4	novel	517	3	NA	NA	9	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_1	159	104	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	-58327141	True	NA	-29	True	AATAAA	-20	NA	58327239	58314787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr19_-_58315037_58325171_58325362_58326822
transcript_77145.nic	chr19	-	814	3	ISM	ENSG00000283103.4	ENST00000651375.3	2818	5	-52	4356	-48	0	5prime_fragment	FALSE	canonical	3	298	junction_1	12.5	1596	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTCAATTGCCGGTTGGT	NA	False	NA	-29	True	AATAAA	-20	NA	58327300	58314787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr19_-_58315037_58325274_58325362_58326822
transcript_77146.known	chr19	-	2708	2	FSM	ENSG00000268516.3	ENST00000597230.3	2726	2	18	0	0	0	multi-exon	FALSE	canonical	3	41	junction_1	0	516	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTGCTTTGTGTGTTTCGT	-58278782	False	NA	-4	True	AATACA	-23	NA	58278808	58257269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58259692_58278522
transcript_77148.nnic	chr19	-	461	2	FSM	ENSG00000268516.3	ENST00000693494.1	439	2	-22	0	-4	0	multi-exon	FALSE	canonical	3	25	junction_1	0	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTTTTGGAAAATGCT	-58278804	False	NA	0	True	AATATA	-24	NA	58278830	58274700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58274854_58278522
transcript_77150.known	chr19	+	218	3	FSM	ENSG00000198131.15	ENST00000599714.1	218	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	111	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCCTGGTGTGTTTTTTG	58229453	False	NA	NA	False	ATTAAA	-32	NA	58229470	58231820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58229571_58230393_58230463_58231771
transcript_77151.known	chr19	+	895	7	FSM	ENSG00000198131.15	ENST00000595981.5	895	7	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_5	95.2254634480131	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTGTGGTTTGAATGCAA	58229450	False	NA	NA	False	AAAAAG	-8	NA	58229467	58277495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58229571_58230393_58230463_58243964_58244057_58246300_58246428_58246710_58246795_58276322_58276430_58277182
transcript_77152.known	chr19	+	922	4	FSM	ENSG00000142396.10	ENST00000427361.5	922	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	132.969503604732	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTTTTGTCTGTCTCAT	58299836	True	NA	13	True	NA	NA	NA	58305373	58315202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58305446_58306087_58306217_58312196_58312463_58314747
transcript_77153.known	chr19	+	1469	4	FSM	ENSG00000142396.10	ENST00000413518.5	1469	4	0	0	0	0	multi-exon	FALSE	canonical	3	262	junction_3	40.4749579644281	1265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGATGTATATTTT	NA	False	NA	34	True	TATAAA	-32	NA	58305318	58315663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58305446_58306087_58306217_58312165_58312463_58314747
transcript_77154.known	chr19	-	683	2	FSM	ENSG00000283103.4	ENST00000669440.2	687	2	4	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCGGTTGGTGGTTCACC	-58327150	True	NA	-21	True	AATAAA	-28	NA	58327248	58314779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58315037_58326822
transcript_77155.known	chr19	+	616	2	FSM	ENSG00000142396.10	ENST00000434052.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATAAACAGGAGAGGGAGGAT	58299839	True	NA	NA	False	NA	NA	NA	58305376	58306634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58305446_58306087
transcript_77156.known	chr19	+	4227	7	FSM	ENSG00000267216.1	ENST00000591325.1	4227	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	128.738753554113	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGATCCTTTTGTCTGT	58275341	True	NA	8	True	NA	NA	NA	58278965	58315197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58280610_58285716_58285844_58286109_58286206_58294097_58295582_58306087_58306217_58312165_58312463_58314747
transcript_77158.known	chr19	+	959	3	FSM	ENSG00000268895.6	ENST00000593374.5	959	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGGAGCATTCCAGGCAGA	58347379	True	NA	NA	False	NA	NA	NA	58347751	58354425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58347845_58353320_58353475_58353713
transcript_77159.known	chr19	+	1736	3	FSM	ENSG00000269054.3	ENST00000599889.3	1835	3	14	85	14	-58	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCTTATGCCTGCAACCG	58362389	True	NA	NA	False	NA	NA	NA	58362582	58367535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58362753_58364535_58364600_58366033
transcript_77161.known	chr19	-	475	2	FSM	ENSG00000121410.12	ENST00000598345.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_1	0	2388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAAATGTCTTTGGACTCC	-58346153	True	NA	-10	True	AATAAA	-19	NA	58347657	58346859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58347030_58347352
transcript_77162.known	chr19	+	1762	3	FSM	ENSG00000269054.3	ENST00000663335.1	1762	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGTTAGGGGAAGCCTGTG	58362414	True	NA	NA	False	AATAAA	-4	NA	58362607	58367593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58362753_58364535_58364593_58366033
transcript_77170.known	chr19	+	741	6	FSM	ENSG00000083845.9	ENST00000196551.8	741	6	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_5	450.338539323474	44723	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285770	True	NA	45	True	AATAAA	-31	NA	58387268	58394804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58387340_58388136_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_77171.known	chr19	+	1520	5	FSM	ENSG00000083845.9	ENST00000596046.1	1520	5	0	0	0	0	multi-exon	FALSE	canonical	3	7831	junction_4	354.831914432735	4858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGCTGTTGTCTGTCTTCG	58285790	True	NA	47	True	AATAAA	-33	NA	58387288	58394806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58388246_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_77172.known	chr19	+	536	5	FSM	ENSG00000083845.9	ENST00000598098.5	536	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	3588.99856331819	4783	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGCTGTTGTCTGTCTT	58285765	True	NA	45	True	AATAAA	-31	NA	58387263	58394804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58387340_58388136_58388246_58393358_58393488_58394496_58394596_58394681
transcript_77173.known	chr19	+	800	7	FSM	ENSG00000083845.9	ENST00000598495.5	800	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3857.0755185186	4599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCACCTGTGCTGTTGTCTG	58285770	True	NA	41	True	AATAAA	-27	NA	58387268	58394800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58387340_58388136_58388246_58388417_58388481_58392975_58393186_58393358_58393488_58394496_58394596_58394681
transcript_77174.nic	chr19	+	2259	4	NIC	ENSG00000171574.18	novel	2187	4	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	9.7410927974683	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	58408274	True	NA	10	True	AATAAA	-10	NA	58408656	58418310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_58409166_58409964_58410092_58415523_58415647_58416810
transcript_77175.known	chr19	+	2187	4	FSM	ENSG00000171574.18	ENST00000593920.5	2187	4	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	9.41629792788369	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAGCCGCTTAAAATTT	58408305	True	NA	10	True	AATAAA	-10	NA	58408687	58418310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58409166_58410005_58410092_58415523_58415647_58416810
transcript_77177.known	chr19	+	2308	4	FSM	ENSG00000171574.18	ENST00000306910.9	2308	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	11.8977121983832	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTATTTTTTTTT	58408266	True	NA	27	True	AATAAA	-27	NA	58408648	58418327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58409166_58409940_58410092_58415523_58415647_58416810
transcript_77178.known	chr19	+	575	2	FSM	ENSG00000171574.18	ENST00000596281.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCCAGGAGAGGTTTTGG	58408306	True	NA	NA	False	NA	NA	NA	58408688	58415621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58409166_58415523
transcript_77179.known	chr19	-	2962	3	FSM	ENSG00000131849.13	ENST00000254166.4	2962	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTAATCTTAGGGGTTCT	-58440032	True	NA	-5	True	AATAAA	-20	NA	58440153	58432813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58435212_58437046_58437216_58439758
transcript_7718.known	chr1	+	16899	13	FSM	ENSG00000122484.9	ENST00000610020.2	16899	13	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_6	14.0524809988209	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGCCCAATTCTATTTTC	92297052	True	NA	2	True	AATAAA	-16	NA	92299058	92402056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_77182.known	chr19	+	2050	7	FSM	ENSG00000083838.17	ENST00000594369.6	2050	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	8.07602762639048	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAGTTTCTGAATAAGAAT	58476325	True	NA	NA	False	CATAAA	-17	NA	58476351	58481230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58476505_58477178_58477561_58477636_58477827_58478086_58478182_58479642_58479728_58479929_58480020_58480175
transcript_77186.known	chr19	+	5054	4	FSM	ENSG00000083812.13	ENST00000196482.4	5054	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	2.49443825784929	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTGGAGGGAAACCTCCAC	58466769	True	NA	NA	False	AATAAA	-21	NA	58467079	58475436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58467184_58469179_58469307_58469727_58469845_58470730
transcript_77192.known	chr19	-	474	2	FSM	ENSG00000083807.10	ENST00000599700.1	474	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAAGTCTGTATGTCTGCGT	-58497425	True	NA	-7	True	AATAAA	-16	NA	58499241	58498336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58498692_58499122
transcript_77193.known	chr19	-	643	3	FSM	ENSG00000083807.10	ENST00000594786.1	643	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	1	2162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTATGTCTGCGTGGAT	-58497459	True	NA	-3	True	AATAAA	-20	NA	58499275	58498332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58498692_58498784_58498916_58499122
transcript_77200.nic	chr19	+	2495	17	NIC	ENSG00000130726.12	novel	3364	17	NA	NA	-17	0	combination_of_known_junctions	TRUE	canonical	3	602	junction_1	673.62247169687	480	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	58544015	False	NA	34	True	AATAAA	-14	NA	58544046	58550715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr19_+_58544212_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_77203.known	chr19	+	3364	17	FSM	ENSG00000130726.12	ENST00000253024.10	3364	17	0	0	0	0	multi-exon	FALSE	canonical	3	2280	junction_7	388.512181075124	460	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCAGGCGTTGGCTGGTTG	58543021	True	NA	34	True	AATAAA	-14	NA	58544063	58550715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58545098_58545424_58545538_58545763_58545897_58547375_58547512_58547596_58547714_58547791_58547907_58548033_58548181_58548293_58548409_58548485_58548593_58548739_58548777_58548861_58548911_58548987_58549241_58549330_58549651_58549736_58549861_58549948_58550036_58550146_58550285_58550376
transcript_77208.known	chr19	+	338	3	FSM	ENSG00000130726.12	ENST00000600840.1	338	3	0	0	0	0	multi-exon	FALSE	canonical	3	3169	junction_2	94	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGCTGCTGGGTCTCGCC	58549532	False	NA	NA	False	NA	NA	NA	58549555	58550067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58549651_58549736_58549861_58549948
transcript_77221.known	chr19	-	885	6	FSM	ENSG00000130724.10	ENST00000601220.5	885	6	0	0	0	0	multi-exon	FALSE	canonical	3	371	junction_5	258.970577479373	3365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542598	True	NA	-11	True	AATAAA	-16	NA	58554973	58551565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554864
transcript_77222.known	chr19	-	894	6	FSM	ENSG00000130724.10	ENST00000312547.7	894	6	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_5	250.73380306612	4747	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCAGGCCCATGTGACT	-58542730	True	NA	-11	True	AATAAA	-16	NA	58555105	58551565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58551777_58551905_58551968_58552054_58552186_58552258_58552439_58554044_58554237_58554987
transcript_77225.known	chr19	-	734	7	FSM	ENSG00000130725.8	ENST00000595957.5	734	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	746.62271075974	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCGGGGTGGCTACATCG	-58554456	True	NA	NA	False	NA	NA	NA	58558954	58556140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272_58558355_58558693
transcript_7723.nnic	chr1	+	2096	12	NIC	ENSG00000122484.9	novel	16899	13	NA	NA	-56	114	combination_of_known_splicesites	FALSE	canonical	1	1	junction_11	25.9028700665766	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCCAGCCATCATATC	92296996	True	NA	NA	False	AATATA	-22	NA	92299002	92387347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444_92324376_92333390_92333474_92336346_92336428_92345845_92345915_92387010
transcript_77230.known	chr19	-	1159	6	FSM	ENSG00000130725.8	ENST00000253023.8	1159	6	0	0	0	0	multi-exon	FALSE	canonical	3	1868	junction_1	103.157355530277	2070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTCTGCTTCTTACTTC	-58548531	True	NA	-5	True	ATTAAA	-17	NA	58558611	58555711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58556230_58556315_58556380_58556686_58556791_58556891_58556931_58557062_58557158_58558272
transcript_77235.known	chr19	+	1308	4	FSM	ENSG00000286104.1	ENST00000487264.5	1308	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4.24264068711928	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAGAATAGAGCACTTTTA	58573297	True	NA	NA	False	TATAAA	-23	NA	58575444	58599801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58575589_58586154_58586357_58591497_58591625_58598966
transcript_7724.nnic	chr1	+	1278	12	NIC	ENSG00000122484.9	novel	16899	13	NA	NA	-56	77	combination_of_known_splicesites	TRUE	canonical	1	2	junction_7	25.9793306271488	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATTCAAGAAAATATAATGA	92296996	True	NA	NA	False	ATTAAA	-17	NA	92299002	92387310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92333390_92333474_92336346_92336428_92345845_92345915_92380723_92380874_92387010
transcript_77240.known	chr19	+	944	3	FSM	ENSG00000286104.1	ENST00000473164.1	944	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATTTGACTAGAACTCAA	58573308	True	NA	NA	False	NA	NA	NA	58575455	58599575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58575589_58586154_58586357_58598966
transcript_77247.known	chr19	+	3282	2	FSM	ENSG00000213753.11	ENST00000493504.1	3282	2	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	0	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTACTCTTTGTTGTGTT	58573312	True	NA	12	True	AATAAA	-23	NA	58575459	58584397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58575589_58581244
transcript_77253.known	chr19	-	890	2	FSM	ENSG00000269600.2	ENST00000596427.1	890	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGGAAGTAAGGTTGACT	NA	False	NA	NA	False	NA	NA	NA	58599355	58597182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_-_58597817_58599099
transcript_77254.known	chr19	+	1120	1	FSM	ENSG00000267858.7	ENST00000661912.1	1120	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAATTTCCAGGTGAAAT	58559075	True	NA	NA	False	NA	NA	NA	58559159	58560279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58559200_58560300
transcript_77255.known	chr19	+	469	1	FSM	ENSG00000213753.11	ENST00000464061.1	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGGCTAAC	NA	False	NA	NA	False	NA	NA	NA	58598966	58599435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr19_+_58599000_58599400
transcript_77256.nnic	chr2	-	530	2	NNC	ENSG00000184731.6	novel	552	2	NA	NA	1	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTATGTGCCCCTTTTGAC	-46690	True	NA	-24	True	AATAAA	-19	NA	46869	41219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_41628_46747
transcript_77258.known	chr2	-	471	2	FSM	ENSG00000184731.6	ENST00000461026.1	471	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGGTATGTGCCCCTTTTGA	-46691	True	NA	-25	True	AATAAA	-18	NA	46870	41220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_41628_46806
transcript_77263.known	chr2	-	1279	11	FSM	ENSG00000035115.22	ENST00000403658.5	1279	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	85.389460707982	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTATATAAAAAGAGCTGACT	-264791	True	NA	-31	True	NA	NA	NA	264810	218665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_242797_242872_243502_243563_247537_247603_249730_249845_253004_253116_264781
transcript_77270.known	chr2	-	1744	10	FSM	ENSG00000035115.22	ENST00000356150.10	1744	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	78.6822018558765	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAATTTTGTTTTTCT	-264013	False	1235	-8	True	AATAAA	-25	NA	264032	218143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_77271.known	chr2	-	1999	10	FSM	ENSG00000035115.22	ENST00000463865.5	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	76.9845262630785	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTAATATTTCAATTTTGTT	-264373	False	NA	-13	True	AATAAA	-20	NA	264392	218148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_224863_224921_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_264083
transcript_77290.known	chr2	-	1695	9	FSM	ENSG00000035115.22	ENST00000403712.6	1695	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_8	58.102146044703	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTTCTTATTTTTT	-264013	False	1235	0	True	AATAAA	-33	NA	264032	218135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219002_229965_230045_231022_231192_233100_233230_234159_234273_247537_247603_249730_249845_253004_253116_263983
transcript_77315.known	chr2	+	546	7	FSM	ENSG00000143727.16	ENST00000442386.5	546	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	1199.09749626774	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGTCAGGTGCTGCAGAG	245865	True	NA	NA	False	NA	NA	NA	264899	277261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_269300_269348_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_7733.nic	chr1	+	1844	8	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-56	77363	-56	609	5prime_fragment	FALSE	canonical	3	51	junction_6	15.7816736910188	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTTCGGTATTCTTTCA	92296996	True	NA	9	True	AATAAA	-27	NA	92299002	92324693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283_92304350_92307187_92307277_92320598_92320635_92323444
transcript_77336.known	chr2	+	573	6	FSM	ENSG00000143727.16	ENST00000484464.5	573	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	1037.60531995552	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGGTGTGTAATCACGTTCC	246170	False	NA	NA	False	NA	NA	NA	265204	277369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265279_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_77342.known	chr2	-	541	6	FSM	ENSG00000035115.22	ENST00000488979.6	541	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	64.9350444675292	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGAAACTAATAGAAAGT	-263333	True	NA	NA	False	NA	NA	NA	264568	233118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233230_234159_234273_247537_247603_249730_249845_253004_253116_264541
transcript_77352.known	chr2	+	1474	6	FSM	ENSG00000143727.16	ENST00000272065.10	1474	6	0	0	0	0	multi-exon	FALSE	canonical	3	2047	junction_3	312.497423989383	7337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245912	True	NA	94	True	AATAAA	-36	NA	264946	278283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036_272151_275139_275202_276979_277086_277226
transcript_77353.known	chr2	+	1552	6	FSM	ENSG00000143727.16	ENST00000272067.10	1552	6	0	0	0	0	multi-exon	FALSE	canonical	3	504	junction_2	1042.8108936907	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGTGTCTGCCTGTTTTT	245834	True	NA	94	True	AATAAA	-36	NA	264868	278283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272191_272306_275139_275202_276979_277086_277226
transcript_77354.known	chr2	+	689	5	FSM	ENSG00000143727.16	ENST00000413140.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	1182.7350717722	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTTATGGGGTATTTTAA	245858	True	NA	14	True	AATAAA	-16	NA	264892	277506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036_272151_276979_277086_277226
transcript_77355.known	chr2	+	577	7	FSM	ENSG00000143727.16	ENST00000453390.5	577	7	0	0	0	0	multi-exon	FALSE	canonical	3	235	junction_3	1063.42826117546	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAATCACGTTCCAGGGCC	245930	True	NA	NA	False	NA	NA	NA	264964	277375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_265008_271865_271940_272036_272066_272191_272306_275139_275202_276979_277086_277226
transcript_77356.known	chr2	-	1184	6	FSM	ENSG00000189292.16	ENST00000403610.9	1184	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	14.8458748479165	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGTCTTCAAAGTGACTCT	-288072	False	NA	1	True	AATAAA	-34	NA	288091	279557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_280153_283110_283176_286122_286204_286289_286344_287582_287893_288012
transcript_77357.known	chr2	-	526	5	FSM	ENSG00000189292.16	ENST00000401489.6	526	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	12.8062484748657	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAACACAAAAGGA	-287668	False	NA	NA	False	GATAAA	-36	NA	287687	279928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_280150_283110_283176_286122_286204_286289_286344_287582
transcript_7736.nic	chr1	+	469	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-56	97708	-56	-19736	5prime_fragment	FALSE	canonical	3	79	junction_2	7.17635004720366	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAGTTTAAAGGCTTTCA	92296996	True	NA	NA	False	AATAAA	-24	NA	92299002	92304348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_77365.known	chr2	-	2572	6	FSM	ENSG00000151353.15	ENST00000432667.5	2572	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_4	124.764418004494	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCAGGTCTCAGGTAGTATC	-673805	True	NA	NA	False	ATTAAA	-20	NA	677406	667972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_675757_676239_677288
transcript_7737.nic	chr1	+	1572	5	ISM	ENSG00000122484.9	ENST00000610020.2	16899	13	-56	96605	-56	-18633	5prime_fragment	FALSE	canonical	3	79	junction_2	7.17635004720366	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GACAATATGGGAAGATATAA	92296996	True	NA	NA	False	NA	NA	NA	92299002	92305451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_92299147_92300193_92300240_92301475_92301591_92303976_92304076_92304283
transcript_77370.known	chr2	-	654	5	FSM	ENSG00000151353.15	ENST00000405941.3	654	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	117.172949096624	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTTTTCAGCCAGCACTG	-673103	False	NA	NA	False	TTTAAA	-31	NA	676704	669422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_676573
transcript_77372.known	chr2	-	6187	5	FSM	ENSG00000151353.15	ENST00000281017.8	6187	5	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_4	32.4913450014	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTCTGTAAGTTACTG	-673805	True	NA	2	True	AATAAA	-32	NA	677406	663876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_669676_669756_669851_672807_672863_675509_675631_677288
transcript_77380.known	chr2	+	1943	3	FSM	ENSG00000233296.2	ENST00000445418.1	1943	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGGCCTCCCCATCCCTG	677129	True	NA	NA	False	NA	NA	NA	677185	682802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_677474_680043_680152_681255
transcript_77383.nnic	chr2	+	849	3	NNC	ENSG00000223751.2	novel	2012	2	NA	NA	-43	5121	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTGAAAAAAAATAAATGGG	740742	False	NA	NA	False	AATAAA	-28	NA	740841	754544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_741131_749733_749857_754107
transcript_77384.nnic	chr2	+	1205	3	NNC	ENSG00000223751.2	novel	2012	2	NA	NA	-184	5336	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	2	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTTCTGTCTACTCAGAG	740601	False	NA	NA	False	ATTAAA	-17	NA	740700	754759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_741131_749733_749857_754107
transcript_77386.known	chr2	-	1536	4	FSM	ENSG00000228799.6	ENST00000445279.6	1536	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATACAGTTCTGAATTCTCT	NA	False	NA	NA	False	TATAAA	-37	NA	905539	899461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_900453_901561_901719_901891_901960_905219
transcript_77391.nnic	chr2	-	873	3	FSM	ENSG00000235688.3	ENST00000456949.3	869	3	-4	0	-4	0	multi-exon	FALSE	canonical	3	18	junction_2	29.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	-949172	True	NA	-6	True	AATAAA	-29	NA	950769	949626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_949802_949910_950387_950547
transcript_77397.nnic	chr2	-	781	3	FSM	ENSG00000235688.3	ENST00000691420.1	722	3	-66	7	-4	0	multi-exon	FALSE	canonical	2	7	junction_1	5.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAACACTTTACTTTTT	-949172	True	NA	-20	True	AATAAA	-15	NA	950769	949640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_949802_949988_950387_950547
transcript_77403.nnic	chr2	-	975	2	FSM	ENSG00000235688.3	ENST00000692544.1	976	2	-6	7	-4	0	multi-exon	FALSE	canonical	3	18	junction_1	0	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTACTTTTTCTGACTC	-949172	True	NA	-13	True	AATAAA	-22	NA	950769	949633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_950387_950547
transcript_77404.nnic	chr2	-	1271	2	FSM	ENSG00000235688.3	ENST00000684906.1	1348	2	-307	384	-307	0	multi-exon	FALSE	canonical	1	2	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAAACACTTTACTTTTT	NA	False	NA	-20	True	AATAAA	-15	NA	951809	949640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_950387_951284
transcript_77405.known	chr2	-	539	2	ISM	ENSG00000235688.3	ENST00000456949.3	869	3	491	0	429	0	3prime_fragment	FALSE	canonical	3	77	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCTGACTCCGACTTG	-950209	False	NA	-6	True	AATAAA	-29	NA	950274	949626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_949802_949910
transcript_77407.known	chr2	+	319	2	FSM	ENSG00000172554.12	ENST00000489646.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGATGAATTTTTTGGTGA	NA	False	NA	21	True	AATAAA	-23	NA	1247324	1256604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_1247444_1256404
transcript_77408.known	chr2	-	1641	2	FSM	ENSG00000203635.2	ENST00000366424.2	1641	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACGGGAGCTACAATTCAAGA	-1624464	True	NA	NA	False	NA	NA	NA	1625419	1620509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_1621980_1625248
transcript_77410.known	chr2	-	6817	23	FSM	ENSG00000130508.11	ENST00000252804.9	6817	23	0	0	0	0	multi-exon	FALSE	canonical	3	289	junction_19	72.8008718501967	157	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCTTTATTTTTTTTT	-1727494	True	NA	-1	True	AATAAA	-22	NA	1744515	1631886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_1634324_1635407_1635522_1638845_1638979_1639301_1639423_1643367_1643577_1644617_1644753_1648171_1649676_1653627_1653786_1654399_1654509_1660880_1661038_1662071_1662185_1663604_1663764_1664957_1665075_1666213_1666487_1673642_1673813_1676926_1677045_1680192_1680363_1683655_1683728_1684079_1684152_1687631_1687704_1691927_1692000_1693062_1693135_1744255
transcript_77416.nic	chr2	-	1226	6	NIC	ENSG00000032389.13	novel	1657	9	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	73.7265216865681	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375904	True	NA	-5	True	AATAAA	-17	NA	3377840	3188969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214170_3377647
transcript_77419.known	chr2	-	1657	9	FSM	ENSG00000032389.13	ENST00000382125.9	1657	9	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_6	12.5343278639104	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGTGCTCGGCTCATTCTT	-3375882	True	NA	-5	True	AATAAA	-17	NA	3377818	3188969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3338016_3338150_3354549_3354634_3377647
transcript_7742.nic	chr1	-	1537	9	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	-86	185106	-86	10056	5prime_fragment	FALSE	canonical	3	27	junction_6	8.22249201884684	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTATTTTATATTTTTG	-92785160	False	NA	NA	False	AATACA	-20	NA	92785194	92693801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_92693900_92694298_92694389_92695309_92695454_92697859_92697986_92702140_92702216_92703394_92703620_92704554_92704745_92736397_92736628_92784835
transcript_77420.known	chr2	-	1795	10	FSM	ENSG00000032389.13	ENST00000398659.8	1795	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	75.680615454392	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCCTGGGTCTTTGTCCAT	-3375894	True	NA	-3	True	NA	NA	NA	3377830	3188924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3189509_3192413_3192582_3193998_3194167_3196880_3197018_3214148_3214249_3257298_3257456_3274338_3274420_3338016_3338150_3354549_3354634_3377647
transcript_77424.known	chr2	+	1538	2	FSM	ENSG00000171853.16	ENST00000482645.1	1538	2	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAAATATGGAAAAATATA	3375622	True	NA	1	True	AATAAA	-14	NA	3379719	3389000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3379877_3387619
transcript_77426.known	chr2	-	908	2	FSM	ENSG00000225234.1	ENST00000453806.1	908	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACTTTGGGAGGCCGAG	NA	False	NA	NA	False	NA	NA	NA	3482409	3481241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3481886_3482145
transcript_77427.known	chr2	+	974	2	FSM	ENSG00000235078.1	ENST00000450917.1	974	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAAGAATCTGTTTAGATG	3519245	True	NA	NA	False	NA	NA	NA	3519274	3523197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3519957_3522905
transcript_77428.known	chr2	-	2181	4	FSM	ENSG00000182551.14	ENST00000327435.11	2181	4	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_3	17.9876500843094	413	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTTTTTGAATTTTGACAA	-3511600	True	NA	NA	False	AATAAA	-16	NA	3519531	3497365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3499083_3500813_3500994_3513856_3513977_3519367
transcript_77437.known	chr2	-	5289	8	FSM	ENSG00000171865.10	ENST00000315212.4	5289	8	0	0	0	0	multi-exon	TRUE	canonical	3	391	junction_6	19.1439232112534	1080	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATCCTCGTCTTTGTCTTCT	-3548717	True	NA	-1	True	AATAAA	-33	NA	3558333	3541429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3545872_3547930_3548056_3548639_3548725_3549057_3549113_3550372_3550473_3552143_3552309_3556788_3556905_3558132
transcript_77438.known	chr2	-	482	3	FSM	ENSG00000242282.6	ENST00000439547.5	482	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	1	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGCAGTGTTCGGCCTCA	NA	False	NA	1	True	AATAAA	-25	NA	3533782	3531983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3532311_3533107_3533191_3533710
transcript_7745.nic	chr1	-	716	3	ISM	ENSG00000067208.16	ENST00000684568.2	7795	20	-30	195866	-30	-704	5prime_fragment	FALSE	canonical	3	30	junction_2	3	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTAAGGTATTCATGTTCT	-92782426	True	NA	NA	False	AAAAAG	-12	NA	92785138	92704561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_92704745_92736397_92736628_92784835
transcript_77450.known	chr2	+	836	2	FSM	ENSG00000234171.4	ENST00000426725.2	982	2	139	7	110	-3	multi-exon	FALSE	canonical	3	51	junction_1	0	614	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACACATTGTTAATTTTGT	3558553	False	NA	NA	False	AATAAA	-36	NA	3558577	3561731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3558999_3561316
transcript_77451.known	chr2	+	1115	3	FSM	ENSG00000234171.4	ENST00000438436.4	1275	3	160	0	160	0	multi-exon	FALSE	canonical	3	46	junction_1	38	533	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACATTGTTAATTTTGTATA	3558603	False	NA	NA	False	AATAAA	-39	NA	3558627	3561734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3558999_3559403_3559730_3561316
transcript_77452.known	chr2	-	3700	2	FSM	ENSG00000287126.1	ENST00000656939.1	3700	2	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAAAACATTTAAAGAAAA	-3574897	True	NA	NA	False	AATAAA	-16	NA	3575100	3568504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_3571239_3574134
transcript_77458.known	chr2	+	710	7	FSM	ENSG00000171863.15	ENST00000646909.1	710	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	4560.37805450382	34912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTCAGTTATGTTTT	3398622	True	NA	3	True	AATAAA	-19	NA	3575315	3580919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575351_3575556_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_7746.known	chr1	-	525	3	FSM	ENSG00000067208.16	ENST00000474806.1	525	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGGTCACACACTGAGGTG	-92782394	True	NA	NA	False	NA	NA	NA	92785106	92703857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92703922_92704554_92704745_92784835
transcript_77460.known	chr2	+	704	7	FSM	ENSG00000171863.15	ENST00000406376.1	704	7	0	0	0	0	multi-exon	TRUE	canonical	3	561	junction_1	4366.22497766154	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTATATATTCACAGTACT	3398664	True	NA	-15	True	AATAAA	-1	NA	3575357	3580901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575449_3575600_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_77467.known	chr2	+	732	7	FSM	ENSG00000171863.15	ENST00000645674.2	732	7	0	0	0	0	multi-exon	FALSE	canonical	3	8025	junction_1	2006.39458288299	316763	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTTCAGTTATGTTTTT	3398566	True	NA	4	True	AATAAA	-20	NA	3575259	3580920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576486_3576631_3577709_3577775_3580109_3580261_3580804
transcript_77468.known	chr2	+	557	7	FSM	ENSG00000171863.15	ENST00000647131.1	557	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	4509.54013422901	1425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GTAAACAAAAATGACTAAAT	3398627	True	NA	-38	True	NA	NA	NA	3575320	3580878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575351_3575591_3575685_3575816_3575889_3576558_3576631_3577709_3577775_3580109_3580261_3580804
transcript_77469.known	chr2	+	511	3	FSM	ENSG00000171863.15	ENST00000479123.1	511	3	0	0	0	0	multi-exon	FALSE	canonical	3	11262	junction_2	521	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAGAAAAAATAAGTTTTAAA	3574874	False	NA	NA	False	NA	NA	NA	3575632	3576873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3575685_3575816_3575889_3576486
transcript_7747.known	chr1	-	2536	5	FSM	ENSG00000154511.12	ENST00000370310.5	2536	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	1.92028643696715	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCACTGATGGTTGGTC	-92960765	True	NA	-10	True	AATAAA	-16	NA	92961462	92842166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92876295_92876431_92961375
transcript_77470.known	chr2	+	556	2	FSM	ENSG00000171863.15	ENST00000472966.1	556	2	0	0	0	0	multi-exon	FALSE	canonical	3	8437	junction_1	0	771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCTGTTTCAGTTATGTTT	3579739	False	NA	2	True	AATAAA	-18	NA	3579818	3580918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3580261_3580804
transcript_77473.known	chr2	+	1425	7	FSM	ENSG00000118004.18	ENST00000349077.9	1425	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.37436854187255	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	3595081	True	NA	NA	False	AAAACA	-24	NA	3595111	3644644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_77474.known	chr2	+	1633	6	FSM	ENSG00000118004.18	ENST00000382062.6	1633	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.979795897113271	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACTAAATGTGTGGAGTCA	NA	False	NA	NA	False	AAAACA	-24	NA	3594831	3644644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3613310_3613383_3640277_3640332_3643443_3643540_3643726
transcript_77475.known	chr2	+	1312	6	FSM	ENSG00000118004.18	ENST00000487365.5	1312	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.46969384566991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	3594924	True	NA	5	True	AATAAA	-20	NA	3594954	3644446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3595169_3604314_3604471_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_77476.known	chr2	+	1134	5	FSM	ENSG00000118004.18	ENST00000402794.4	1134	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.58113883008419	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAAGTCCAAATAGTGGCA	3606034	False	NA	5	True	AATAAA	-20	NA	3606051	3644446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_3606244_3637532_3637605_3640277_3640332_3643443_3643540_3643726
transcript_77478.known	chr2	+	1199	4	FSM	ENSG00000242540.3	ENST00000455579.2	1199	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTACATGTGTATGATTTT	5696205	False	NA	NA	False	AATAAA	-41	NA	5696219	5708095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5696294_5701465_5701548_5703566_5703622_5707107
transcript_77480.known	chr2	+	2021	3	FSM	ENSG00000236106.3	ENST00000655406.1	2021	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTGCAGTATCCCCAAGT	NA	False	NA	NA	False	AATAAA	-17	NA	5726252	5730355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5726580_5728086_5728153_5728727
transcript_77482.known	chr2	+	1746	2	FSM	ENSG00000236106.3	ENST00000413960.2	1769	2	11	12	11	-12	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGATATGTGAGTGGCTGC	5726388	True	NA	NA	False	AATAAA	-4	NA	5726448	5730342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_5726580_5728727
transcript_77484.known	chr2	-	469	2	FSM	ENSG00000230515.1	ENST00000414654.1	469	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGCCTGAAGTTAATTCAC	NA	False	NA	NA	False	NA	NA	NA	7672246	7671603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_7671908_7672081
transcript_77485.known	chr2	+	243	2	FSM	ENSG00000235576.2	ENST00000690653.1	1204	2	91	870	3	-16	multi-exon	FALSE	canonical	2	4	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGTGCCTTGCTATGAT	NA	False	NA	NA	False	ATTAAA	-14	NA	7725800	7730705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_7725854_7730515
transcript_7752.known	chr1	-	2468	4	FSM	ENSG00000154511.12	ENST00000613902.4	2468	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.6495285928003	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATGGTTGGTCTGTTGCT	-92960825	True	NA	-3	True	AATAAA	-23	NA	92961522	92842159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_92844196_92847182_92847360_92850847_92850956_92961375
transcript_77578.nnic	chr2	+	992	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	105	226	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871476	True	NA	25	True	AATAAA	-17	NA	7876616	7891784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_7876785_7878169_7878482_7891272
transcript_77580.nnic	chr2	+	1476	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	34	junction_1	105	230	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCAAGAGTCATCTTCCCT	7871476	True	NA	14	True	AATAAA	-15	NA	7876616	7892268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_7876785_7878169_7878482_7891272
transcript_77583.nnic	chr2	+	812	3	Antisense	novelGene_ENSG00000226506.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	220.5	219	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGTATTATTCTTAAATAC	7871476	True	NA	25	True	AATAAA	-17	NA	7876616	7891784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_7876789_7883431_7883560_7891272
transcript_77613.known	chr2	-	784	5	FSM	ENSG00000236008.4	ENST00000648900.2	803	5	14	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	1.22474487139159	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAGAGGGTTAACTGGCT	-8583709	True	NA	NA	False	AATAAA	-26	NA	8583798	8506445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_8506638_8576910_8577142_8578569_8578712_8579910_8580048_8583716
transcript_77614.known	chr2	+	1299	3	FSM	ENSG00000115738.10	ENST00000396290.2	1299	3	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_2	8	651	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGAGTGGTTTTTAAGAT	8680704	True	NA	NA	False	AATAAA	-25	NA	8682055	8684461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_8682514_8682842_8682907_8683684
transcript_77617.known	chr2	-	7348	30	FSM	ENSG00000134313.17	ENST00000256707.8	7348	30	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	35.5189152601878	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTGTCACATGTCTGAA	-8834437	True	NA	-9	True	AATAAA	-16	NA	8837613	8728857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_8731983_8733443_8733681_8734654_8734754_8736867_8737000_8747144_8747202_8747886_8748001_8750111_8750336_8751465_8751645_8770669_8770833_8776747_8776893_8778638_8778728_8778895_8779140_8779673_8779815_8785740_8786031_8786205_8786358_8788646_8788813_8789879_8790060_8791059_8791225_8793809_8793988_8796770_8796870_8798201_8798301_8800399_8800499_8802929_8803128_8806270_8806370_8812394_8812494_8813236_8813336_8817617_8817717_8818694_8818794_8826985_8827130_8837479
transcript_77618.known	chr2	-	7622	13	FSM	ENSG00000143797.12	ENST00000305997.8	7622	13	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_3	17.1535143791456	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTGTGTTTGCTAA	-9002872	True	NA	1	True	ATTAAA	-17	NA	9003684	8852689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_8858905_8860612_8860765_8862589_8862723_8864169_8864235_8868445_8868550_8873107_8873301_8877029_8877214_8882510_8882566_8888017_8888074_8908620_8908717_8943186_8943265_8958496_8958643_9003539
transcript_77642.known	chr2	-	4859	8	FSM	ENSG00000119185.13	ENST00000360635.7	4859	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	143.157968977045	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9423187	False	3074	NA	False	TATAAA	-23	NA	9423229	9403474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9422478
transcript_77666.known	chr2	-	4153	7	FSM	ENSG00000119185.13	ENST00000355346.9	4153	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_6	41.1933112154011	762	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCCTCTGAGTTTTTAAAA	-9420454	True	NA	NA	False	TATAAA	-23	NA	9423528	9403474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_77670.known	chr2	-	874	7	FSM	ENSG00000119185.13	ENST00000488451.5	874	7	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	154.665948274194	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTGAGTTAACTCTCAAT	-9420406	True	NA	NA	False	ATTAAA	-15	NA	9423480	9406666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9419989_9420101_9423372
transcript_77678.nic	chr2	-	905	6	NIC	ENSG00000119185.13	novel	4153	7	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_5	124.364946829885	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	NA	False	NA	NA	False	ATTAAA	-22	NA	9423572	9406659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9423372
transcript_77679.known	chr2	-	861	6	FSM	ENSG00000119185.13	ENST00000464228.5	861	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	117.505063720675	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTAACTCTCAATGAAGTCA	-9420426	True	NA	NA	False	ATTAAA	-22	NA	9423500	9406659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9418625_9418733_9423372
transcript_77686.known	chr2	-	1772	6	FSM	ENSG00000119185.13	ENST00000238091.8	1772	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_1	103.148436730762	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCCATTTAAAAGTAT	-9420432	True	NA	-18	True	AATAAA	-2	NA	9423506	9405683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_77687.known	chr2	-	1043	6	FSM	ENSG00000119185.13	ENST00000456913.6	1043	6	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_5	43.1925919574179	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATGTGTGGTCGGCTTGCT	-9420356	True	NA	NA	False	NA	NA	NA	9423430	9407029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9407599_9408112_9408206_9412268_9412406_9414177_9414257_9418625_9418733_9423372
transcript_77692.known	chr2	-	1027	5	FSM	ENSG00000119185.13	ENST00000490426.5	1027	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_4	121.826464694663	195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAGACTAGATGTCACAG	-9420388	True	NA	NA	False	NA	NA	NA	9423462	9406348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9407448_9407599_9408112_9408206_9412268_9412406_9423372
transcript_777.known	chr1	+	727	6	FSM	ENSG00000228794.11	ENST00000609139.6	727	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	26.9414179285352	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCCTGACCCTGATCAA	826956	True	NA	NA	False	NA	NA	NA	827666	853452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827776_829002_829105_841199_841374_851926_852111_852670_852767_853390
transcript_77701.known	chr2	-	560	4	FSM	ENSG00000119185.13	ENST00000497031.5	560	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_3	146.679544889152	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAGTCATCTATTTTCTGG	-9420370	True	NA	NA	False	ATTAAA	-34	NA	9423444	9406647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9406906_9408112_9408206_9412268_9412406_9423372
transcript_77707.known	chr2	+	2259	18	FSM	ENSG00000119203.14	ENST00000238112.8	2259	18	0	0	0	0	multi-exon	TRUE	canonical	3	819	junction_4	78.9118907718622	1158	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGTTTACTTTTAATGTC	9413670	True	NA	22	True	AATAAA	-23	NA	9423653	9473101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9423824_9428764_9428829_9429922_9430021_9430751_9430881_9432510_9432689_9433870_9433961_9436210_9436362_9440490_9440667_9441817_9441977_9443514_9443662_9448197_9448351_9452912_9453022_9455658_9455758_9456932_9457028_9459530_9459619_9467706_9467777_9471342_9471440_9472915
transcript_77713.known	chr2	-	4391	19	FSM	ENSG00000151694.14	ENST00000310823.8	4391	19	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_3	13.3592341023903	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGACCTAAGTATAAAACTT	-9552378	True	NA	-32	True	AATAAA	-17	NA	9555830	9488485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9535833_9535923_9536697_9536829_9543152_9543286_9555508
transcript_77715.known	chr2	-	2839	16	FSM	ENSG00000151694.14	ENST00000647979.1	2839	16	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_15	33.3750405742575	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCTCTTCATAATTCTAAGA	-9552282	True	NA	NA	False	AATATA	-33	NA	9555734	9489588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9490519_9491100_9491152_9492897_9492987_9493746_9493826_9494636_9494768_9497113_9497249_9502172_9502277_9505165_9505366_9509978_9510132_9517900_9517990_9518102_9518248_9521202_9521317_9523248_9523339_9526110_9526245_9527785_9527955_9555508
transcript_77718.known	chr2	+	863	6	FSM	ENSG00000134330.19	ENST00000482918.5	863	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	49.4489635887346	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTAGATGATTTTTCAGG	9473359	True	NA	-8	True	AATAAA	-2	NA	9473817	9488444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9473900_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77727.known	chr2	+	1011	6	FSM	ENSG00000134330.19	ENST00000481688.1	1011	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	52.1175594209859	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAGACCATTAGCCAAT	9474806	False	NA	NA	False	NA	NA	NA	9474857	9488314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9475218_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77729.nic	chr2	+	1029	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-41	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	50.5142306681988	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	NA	False	NA	10	True	AATAAA	-20	NA	9473616	9488462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77730.nic	chr2	+	1056	5	NIC	ENSG00000134330.19	novel	863	6	NA	NA	-68	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	50.5142306681988	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	NA	False	NA	28	True	TATAAA	-15	NA	9473749	9488622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_9473900_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77734.known	chr2	+	2137	5	FSM	ENSG00000134330.19	ENST00000470914.5	2137	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	53.5210239064986	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473106	True	NA	NA	False	NA	NA	NA	9474536	9489742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77736.known	chr2	+	818	5	FSM	ENSG00000134330.19	ENST00000492223.5	818	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	56.1003565051061	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCAGGGAAGTTTTATACT	9473108	True	NA	5	True	AATAAA	-15	NA	9474538	9488457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77743.known	chr2	+	2176	6	FSM	ENSG00000134330.19	ENST00000497473.6	2176	6	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	18.8997354478839	409	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAACTATTCCAGTTGT	9473120	True	NA	NA	False	NA	NA	NA	9474550	9489742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9475986_9476040_9478221_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77744.known	chr2	+	837	6	FSM	ENSG00000134330.19	ENST00000351760.11	837	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	52.1175594209859	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAGTTTTATACTTAGGT	9473147	False	NA	10	True	AATAAA	-20	NA	9474577	9488462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9474648_9475986_9476040_9478253_9478371_9481285_9481448_9484431_9484551_9488146
transcript_77745.known	chr2	+	759	3	FSM	ENSG00000134330.19	ENST00000484826.1	759	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	7.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTCTTTTGAGAACTGTTT	9481270	False	NA	28	True	TATAAA	-15	NA	9481283	9488622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9481448_9484431_9484551_9488146
transcript_77746.known	chr2	-	2196	6	FSM	ENSG00000134308.14	ENST00000238081.8	2196	6	0	0	0	0	multi-exon	FALSE	canonical	3	2340	junction_5	553.350015812777	1866	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATGTGATTGTGAGTGCCT	-9593653	True	NA	-17	True	AATAAA	-29	NA	9630997	9583966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_9585346_9587413_9587510_9588164_9588329_9591391_9591516_9630158_9630535_9630940
transcript_77755.known	chr2	+	2267	15	FSM	ENSG00000115750.17	ENST00000263663.10	2267	15	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_11	9.27169271030299	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAAGTCAATTTTTGCA	9840467	True	NA	29	True	TATAAA	-45	NA	9843473	9934416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_77762.nic	chr2	+	1922	12	ISM	ENSG00000115750.17	ENST00000263663.10	2267	15	-123	20707	-92	0	5prime_fragment	FALSE	canonical	3	83	junction_11	10.0823059149177	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAGATAGCAAGTCCATTTG	9843263	True	NA	9	True	AATAAA	-30	NA	9843350	9913709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158
transcript_77764.nnic	chr2	+	1192	8	NNC	ENSG00000115750.17	novel	2267	15	NA	NA	-92	11050	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_7	34.9179796970336	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAATTCAGTGGTTTTCAA	9843263	True	NA	NA	False	AATAAA	-19	NA	9843350	9879814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9875864_9876019_9879520
transcript_77769.known	chr2	+	505	5	FSM	ENSG00000115750.17	ENST00000404869.7	505	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	39.9147529116741	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAACACCAATCACTGGAC	9840490	True	NA	NA	False	NA	NA	NA	9843496	9852124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9851967
transcript_77773.known	chr2	+	1592	14	FSM	ENSG00000115750.17	ENST00000434858.5	1592	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	27.1883633305081	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAATCAAGATCCAAG	9840518	True	NA	NA	False	AATACA	-10	NA	9843524	9933946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9843560_9845219_9845319_9849372_9849461_9851540_9851639_9854325_9854422_9868275_9868430_9882705_9882806_9904858_9905007_9910735_9910914_9911510_9911558_9913158_9913250_9919040_9919112_9919597_9919821_9933782
transcript_77774.known	chr2	+	3568	16	FSM	ENSG00000134317.18	ENST00000324907.14	3568	16	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	6.96531087285812	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTCATTTCCTGTTTTTC	9951464	True	NA	11	True	ATTAAA	-22	NA	9951692	10002277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_9951854_9954914_9955102_9958785_9958857_9961045_9961437_9962454_9962532_9963885_9964043_9964234_9964347_9965286_9965382_9986123_9986283_9990695_9990748_9992006_9992147_9993206_9993245_9995878_9995971_9996315_9996402_9998964_9999030_10000592
transcript_7778.known	chr1	+	896	7	FSM	ENSG00000122406.14	ENST00000645300.1	896	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	2478.99269977859	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGCTCAGGAGCGGGCTGC	92746549	True	NA	-15	True	NA	NA	NA	92832012	92841835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_77780.nnic	chr2	-	1714	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2793	-6	multi-exon	FALSE	canonical	3	23	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTCAGTTTGGGGTCTGGC	-10043429	False	NA	-5	True	AATACA	-18	NA	10043456	10039097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_10040665_10043309
transcript_77782.nnic	chr2	-	495	2	Genic_Genomic	ENSG00000260077.1	novel	1572	1	NA	NA	-2793	-1225	multi-exon	FALSE	canonical	3	23	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGAAAAAAAGACTGCATAT	-10043429	False	NA	NA	False	AAAAAG	-10	NA	10043456	10040316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_10040665_10043309
transcript_77783.known	chr2	-	1572	1	FSM	ENSG00000260077.1	ENST00000567540.1	1572	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTGGGGTCTGGCTTCTTT	-10040636	False	NA	1	True	AATACA	-24	NA	10040663	10039091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10039100_10040700
transcript_77784.known	chr2	+	4033	4	FSM	ENSG00000172059.11	ENST00000535335.1	4033	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	27.7248384425711	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTGTGTCCTGTGTCATT	10043696	False	NA	7	True	TATAAA	-17	NA	10044244	10054836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10044452_10046149_10046420_10047649_10048596_10052226
transcript_77785.known	chr2	+	3431	11	FSM	ENSG00000171848.16	ENST00000641198.1	3431	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	288.33896718966	2395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGATTGGTAAAATTTGCA	10120681	False	NA	24	True	AATAAA	-20	NA	10120697	10131418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10120883_10122754_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10129233
transcript_77787.known	chr2	+	1996	12	FSM	ENSG00000171848.16	ENST00000641498.1	1996	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	424.289995168399	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGGGGGGAAGGAAAAGA	10099533	True	NA	NA	False	AAGAAA	-43	NA	10122738	10199288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10122898_10122982_10123058_10123386_10123531_10123735_10123853_10124716_10124851_10126874_10126970_10127086_10127221_10128847_10128953_10129040_10129155_10141853_10141955_10142254_10142376_10198591
transcript_77788.known	chr2	+	560	3	FSM	ENSG00000171848.16	ENST00000498343.5	560	3	0	0	0	0	multi-exon	FALSE	canonical	3	905	junction_2	19	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGTGACTTCCGAACCT	10099533	True	NA	NA	False	NA	NA	NA	10122738	10123712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10122898_10122982_10123058_10123386
transcript_77791.known	chr2	-	1871	4	FSM	ENSG00000285872.2	ENST00000649516.1	1871	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.816496580927726	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTACAATTTTGATGTTT	-10302453	True	NA	NA	False	CATAAA	-18	NA	10302485	10287799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10288482_10289106_10289216_10300841_10301014_10301577
transcript_77792.known	chr2	+	1749	5	FSM	ENSG00000115756.13	ENST00000307845.8	1749	5	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_4	6.57647321898295	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATTTTCTGAGTTTTGC	10301647	True	NA	13	True	AATAAA	-1	NA	10302903	10427604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10303178_10396834_10396921_10419733_10420136_10422982_10423089_10426723
transcript_77795.known	chr2	-	2476	12	FSM	ENSG00000115758.13	ENST00000234111.9	2476	12	0	0	0	0	multi-exon	FALSE	canonical	3	425	junction_7	43.4537847023556	325	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGTTGTGTATCTTCACC	-10438501	True	NA	NA	False	AATAAA	-22	NA	10448327	10439967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10440869_10441508_10441724_10441816_10441930_10442011_10442175_10443229_10443314_10443489_10443572_10443701_10443837_10444094_10444268_10444473_10444648_10444930_10445050_10445154_10445265_10448120
transcript_77803.known	chr2	-	3498	21	FSM	ENSG00000115761.16	ENST00000381685.10	3498	21	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_3	29.5030083211865	516	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGACTCCAAGAAAATTT	-10683079	True	NA	NA	False	AATAAA	-29	NA	10689975	10570753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10572191_10577635_10577739_10589042_10589291_10589577_10589752_10600852_10600943_10602775_10602875_10603077_10603158_10607184_10607312_10644319_10644373_10654480_10654548_10657741_10657892_10659171_10659251_10662958_10663045_10667217_10667279_10668657_10668724_10671553_10671691_10673519_10673558_10675793_10675872_10681970_10682070_10684566_10684613_10689795
transcript_77809.known	chr2	-	2509	14	FSM	ENSG00000143870.13	ENST00000540494.5	2509	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	2887.87812606521	2612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTTGTGAGCAATTTCT	-10739361	True	NA	-23	True	AATAAA	-14	NA	10812839	10783392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10810242_10810421_10812677
transcript_77814.known	chr2	+	3102	13	FSM	ENSG00000143882.12	ENST00000381661.3	3102	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.69129254365919	268	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTGCCTACTTTGTTTA	10721546	True	NA	NA	False	AATAAA	-16	NA	10721648	10785110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10721732_10722823_10722979_10726501_10726570_10753980_10754067_10764330_10764426_10768718_10768811_10771838_10771938_10772541_10772611_10774787_10774881_10774977_10775072_10778571_10778670_10782242_10782376_10783173
transcript_77826.known	chr2	-	2279	13	FSM	ENSG00000143870.13	ENST00000272227.8	2279	13	0	0	0	0	multi-exon	FALSE	canonical	3	7263	junction_3	518.508832829511	9281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTGTGAGCAATTTCTCT	-10739307	True	NA	-21	True	AATAAA	-16	NA	10812785	10783390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_10784327_10784933_10785031_10787280_10787440_10788696_10788770_10788896_10788982_10789748_10789890_10790718_10790834_10791794_10791926_10793095_10793203_10797080_10797208_10797699_10797758_10802498_10802641_10812677
transcript_77827.nnic	chr2	+	558	2	FSM	ENSG00000271952.3	ENST00000691398.1	601	2	9	34	-1	0	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGTGGTTTTTAATTA	NA	False	NA	NA	False	ATTAAA	-19	NA	10844232	10885118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_10844506_10884833
transcript_77833.nnic	chr2	+	683	5	NNC	ENSG00000150873.12	novel	7902	3	NA	NA	-3103	3259	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	2.17944947177034	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTCCTTCCCTTTCCCTC	NA	False	NA	NA	False	AATACA	-26	NA	11130024	11154576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11130184_11130469_11130520_11140509_11140550_11143919_11144143_11154365
transcript_77839.nnic	chr2	+	1153	4	NNC	ENSG00000150873.12	novel	980	4	NA	NA	-134	0	at_least_one_novel_splicesite	TRUE	canonical	1	1	junction_3	2.94392028877595	6	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGTCTCAGATATTTTG	11132939	False	NA	9	True	AATAAA	-17	NA	11132993	11151317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11133592_11140509_11140550_11143919_11144143_11151025
transcript_77841.nnic	chr2	+	1175	4	NNC	ENSG00000150873.12	novel	980	4	NA	NA	-237	3259	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	2.62466929133727	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCGTCCTTCCCTTTCCCTC	11132836	False	NA	NA	False	AATACA	-26	NA	11132890	11154576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11133592_11140509_11140550_11143919_11144143_11154365
transcript_77842.known	chr2	+	928	8	FSM	ENSG00000162976.13	ENST00000445921.5	928	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	72.8417350654619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGACTTGAAAGAAAGAGC	11153180	True	NA	NA	False	AGTAAA	-33	NA	11155430	11177957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11172750_11172825_11174967_11175010_11177736
transcript_77843.known	chr2	+	1717	7	FSM	ENSG00000162976.13	ENST00000295083.8	1717	7	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_5	33.4784341861377	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	11153216	True	NA	16	True	AATAAA	-16	NA	11155466	11178856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11174967_11175010_11177736
transcript_77847.known	chr2	+	1784	6	FSM	ENSG00000162976.13	ENST00000441908.6	1784	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	60.8013157752363	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTGTCAATCATTAATA	11153121	True	NA	30	True	AATAAA	-30	NA	11155371	11178870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11171924_11172046_11177736
transcript_77848.known	chr2	+	696	6	FSM	ENSG00000162976.13	ENST00000402361.5	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	61.5031706499754	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCGTTAGGTTATGGTAGT	11153284	True	NA	NA	False	TTTAAA	-28	NA	11155534	11178024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11174967_11175010_11177736
transcript_77851.nnic	chr2	+	1590	5	NIC	ENSG00000162976.13	novel	1717	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_4	73.08385594644	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCTGAGTCTTAAAACT	11153180	True	NA	16	True	AATAAA	-16	NA	11155430	11178856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_11155690_11160465_11160549_11160624_11160695_11164203_11164262_11177736
transcript_77852.known	chr2	+	831	4	FSM	ENSG00000162976.13	ENST00000428481.1	831	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	83.2519602705479	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGACTGATGTTTAATTG	11153358	False	NA	NA	False	AATAAA	-18	NA	11155608	11178279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624_11160749_11177736
transcript_77854.known	chr2	+	453	3	FSM	ENSG00000162976.13	ENST00000464700.5	453	3	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_2	3.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCCCAAATGCAAACGTGT	11153264	True	NA	NA	False	ACTAAA	-16	NA	11155514	11160819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11155690_11160465_11160549_11160624
transcript_77860.known	chr2	+	2900	3	FSM	ENSG00000285569.3	ENST00000656821.1	2900	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGGAAGAAATATAGATAAT	NA	False	NA	NA	False	AATAAA	-3	NA	11405507	11427167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11407364_11421170_11421267_11426219
transcript_77861.known	chr2	-	1253	8	FSM	ENSG00000169016.17	ENST00000437573.5	1253	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	60.6593028348345	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCATTTGAGAATTTATGT	-11462842	True	NA	NA	False	AAGAAA	-42	NA	11466153	11446476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11455341_11455475_11457178_11457234_11465771
transcript_77863.known	chr2	-	3139	7	FSM	ENSG00000169016.17	ENST00000428221.5	3139	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	65.5279838440545	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462835	True	NA	0	True	TATAAA	-25	NA	11466146	11444374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453723_11457178_11457234_11465771
transcript_77864.known	chr2	-	3230	7	FSM	ENSG00000169016.17	ENST00000381525.8	3230	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	52.035244466291	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462850	True	NA	0	True	TATAAA	-25	NA	11466161	11444374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11457178_11457234_11465771
transcript_77867.known	chr2	-	3191	6	FSM	ENSG00000169016.17	ENST00000546212.2	3191	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	66.8538704937867	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTCTGGCGTTGGGTCTCT	-11462866	True	NA	0	True	TATAAA	-25	NA	11466177	11444374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11446524_11447626_11447775_11450011_11450127_11451650_11451807_11453581_11453799_11465771
transcript_77872.known	chr2	-	1061	4	FSM	ENSG00000169016.17	ENST00000468775.1	1061	4	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_3	4.32049379893857	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTTAGGTAAAAGTTGGTAG	-11462792	True	NA	NA	False	NA	NA	NA	11466103	11451349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_11451807_11453581_11453799_11457178_11457234_11465771
transcript_77873.nnic	chr2	+	1609	7	NNC	ENSG00000196208.14	novel	8444	32	NA	NA	509	0	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_1	4.29793231940921	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAGAATTCTGCTCCAAG	11480532	True	NA	4	True	AATAAA	-17	NA	11482849	11581265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_11482964_11556453_11556772_11562462_11562583_11566479_11566657_11576352_11576536_11578296_11578432_11580703
transcript_77883.known	chr2	+	1059	2	FSM	ENSG00000228496.2	ENST00000455754.2	1085	2	26	0	-1	0	multi-exon	FALSE	canonical	2	4	junction_1	0	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAATGCGTCATGTGTCAT	11681209	True	NA	4	True	CATAAA	-16	NA	11681459	11683323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11681493_11682297
transcript_77884.known	chr2	+	1170	2	FSM	ENSG00000228496.2	ENST00000435175.1	1170	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTCATGTGTCATTTTGT	11681210	True	NA	9	True	CATAAA	-21	NA	11681460	11683328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_11681493_11682190
transcript_77885.known	chr2	+	623	4	FSM	ENSG00000224184.6	ENST00000451644.5	623	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGAGATTTAAAAGTTT	NA	False	NA	NA	False	AATAAA	-17	NA	12007115	12131585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12007228_12007746_12007844_12106817_12106952_12131305
transcript_77890.nic	chr2	+	4177	4	NIC	ENSG00000071575.12	novel	4344	3	NA	NA	-48	0	combination_of_known_junctions	FALSE	canonical	3	215	junction_1	119.622554543679	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711081	True	NA	77	True	AATAAA	-22	NA	12716861	12742734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_12717011_12717251_12718578_12723259_12723553_12740325
transcript_77894.known	chr2	+	2778	3	FSM	ENSG00000071575.12	ENST00000381465.2	2778	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	209.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711154	True	NA	77	True	AATAAA	-22	NA	12716934	12742734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12717011_12723259_12723553_12740325
transcript_77895.known	chr2	+	4344	3	FSM	ENSG00000071575.12	ENST00000155926.9	4344	3	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_2	19.5	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGGAGTCTGGAAAATGA	12711155	True	NA	77	True	AATAAA	-22	NA	12716935	12742734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12718578_12723259_12723553_12740325
transcript_77896.known	chr2	+	830	3	FSM	ENSG00000071575.12	ENST00000405331.3	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	235.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTCATTTAGAAGATGA	12718126	True	NA	22	True	AATAAA	-23	NA	12718237	12724825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_12718578_12723259_12723553_12724628
transcript_77897.known	chr2	-	1648	4	FSM	ENSG00000225649.7	ENST00000653005.1	1648	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTAATAACTCCATTTCA	NA	False	NA	NA	False	AATAAA	-18	NA	13006984	12966781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_12968034_13001587_13001742_13003823_13003952_13006870
transcript_77898.known	chr2	-	7278	52	FSM	ENSG00000151779.13	ENST00000281513.10	7278	52	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_32	25.8502177214738	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCAAGCTGCCGCTTTTT	-15559478	True	NA	-21	True	AATAAA	-16	NA	15561334	15166915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15167324_15178987_15179117_15186741_15186881_15190263_15190404_15218772_15218969_15232421_15232512_15234544_15234748_15238467_15238687_15275483_15275819_15276850_15277102_15287072_15287184_15292536_15292767_15308215_15308354_15309170_15309248_15327749_15327871_15328198_15328313_15330597_15330766_15351991_15352082_15353552_15353711_15356302_15356417_15366579_15366694_15374607_15374721_15379601_15379832_15383214_15383318_15394226_15394350_15396412_15396476_15402167_15402302_15415545_15415720_15417526_15417713_15424314_15424469_15427710_15427795_15461200_15461338_15461686_15461792_15467328_15467408_15467663_15467805_15468381_15468534_15473221_15473348_15474066_15474325_15475686_15475881_15478225_15478290_15488893_15489023_15504144_15504214_15511211_15511351_15534542_15534642_15536417_15536552_15539222_15539357_15551492_15551537_15553425_15553474_15554060_15554139_15556782_15556820_15558579_15558635_15561187
transcript_779.nic	chr1	+	1759	6	ISM	ENSG00000228794.11	ENST00000691316.1	3092	7	-145	2805	-51	0	5prime_fragment	FALSE	canonical	3	27	junction_3	15.587174214719	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	827534	False	NA	9	True	AATAAA	-12	NA	827546	854385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_827776_829002_829105_847653_847807_851926_852111_852670_852767_853390
transcript_77901.known	chr2	+	2384	24	FSM	ENSG00000079785.16	ENST00000617198.5	2384	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.175200615801	790	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572074	True	NA	6	True	AATAAA	-14	NA	15591851	15631101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15591950_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15613223_15613285_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_77902.known	chr2	+	2423	25	FSM	ENSG00000079785.16	ENST00000677437.1	2423	25	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_13	297.418884833421	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATGAAGGTTTGTGTC	15572090	True	NA	6	True	AATAAA	-14	NA	15591867	15631101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15591950_15595144_15595197_15595489_15595554_15596733_15596764_15597374_15597472_15599668_15599717_15602547_15602632_15603191_15603276_15603813_15603891_15604436_15604510_15605949_15606027_15606149_15606265_15607174_15607314_15617243_15617343_15618180_15618271_15620207_15620397_15621064_15621117_15623435_15623583_15627053_15627146_15628444_15628518_15628637_15628711_15628796_15628840_15629601_15629698_15629989_15630111_15630775
transcript_77903.known	chr2	-	1313	4	FSM	ENSG00000233718.9	ENST00000641263.1	1313	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	4.71404520791032	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGGATCGATTGACTTCA	-15941366	False	NA	-2	True	ATTAAA	-14	NA	15941582	15936264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15937177_15938499_15938726_15940973_15941098_15941531
transcript_77905.known	chr2	-	770	3	FSM	ENSG00000233718.9	ENST00000419083.6	776	3	6	0	6	0	multi-exon	FALSE	canonical	3	11	junction_2	6	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGGTGGCGCCGCGGTGGT	NA	False	NA	NA	False	AATAAA	-23	NA	15941723	15939897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15940352_15940973_15941098_15941531
transcript_77908.known	chr2	+	1693	2	FSM	ENSG00000134323.12	ENST00000638417.1	1693	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	119	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAACTCAACCTTTTCCTT	15938897	False	NA	19	True	AATAAA	-19	NA	15940565	15947007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_15940744_15945492
transcript_77910.known	chr2	-	496	2	FSM	ENSG00000233718.9	ENST00000641387.2	794	2	71	227	10	64	multi-exon	FALSE	canonical	3	23	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTGCGTGTTGTGCAGCTG	-15941022	False	216	NA	False	NA	NA	NA	15941238	15940120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_15940352_15940973
transcript_77916.known	chr2	-	642	4	FSM	ENSG00000236989.5	ENST00000412381.5	642	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	4.49691252107735	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCAGAATCTTGCAATTG	-16105683	True	NA	NA	False	NA	NA	NA	16105841	16085221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_16085484_16097358_16097463_16105414_16105544_16105694
transcript_77919.nic	chr2	-	976	4	NIC	ENSG00000236989.5	novel	853	3	NA	NA	-95	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_1	4.10960933531265	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGCTTCAATTAACA	NA	False	NA	0	True	AATAAA	-34	NA	16105936	16096425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_16096927_16097358_16097463_16105414_16105544_16105694
transcript_7792.known	chr1	+	1028	8	FSM	ENSG00000122406.14	ENST00000370321.8	1028	8	0	0	0	0	multi-exon	FALSE	canonical	3	5844	junction_6	569.066869568785	129872	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGTGTTAAGCTCTTAT	92746576	True	NA	35	True	AATAAA	-18	NA	92832039	92841924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92836189_92836393_92837455_92837634_92840550_92840640_92841765
transcript_77923.known	chr2	-	853	3	FSM	ENSG00000236989.5	ENST00000428280.1	853	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACATTGGCTTCAATTAACA	-16105641	False	NA	0	True	AATAAA	-34	NA	16105662	16096425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_16096927_16097358_16097463_16105414
transcript_77926.known	chr2	-	4670	12	FSM	ENSG00000197872.11	ENST00000381323.7	4670	12	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	11.0849462361281	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCACCTCTATTTTATATGA	-16665068	True	NA	-3	True	ATTAAA	-23	NA	16665834	16549458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_16553000_16555068_16555140_16559459_16559587_16560989_16561070_16561160_16561278_16561455_16561534_16562004_16562142_16563988_16564095_16565645_16565768_16588049_16588130_16623863_16624020_16665779
transcript_7793.known	chr1	+	629	6	FSM	ENSG00000122406.14	ENST00000645119.1	629	6	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	2699.49236709423	326	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTCTGTGTTAAGCTCTTA	92746593	True	NA	34	True	AATAAA	-17	NA	92832056	92841923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778_92834914_92840550_92840640_92841765
transcript_7794.known	chr1	+	733	4	FSM	ENSG00000122406.14	ENST00000646852.1	733	4	0	0	0	0	multi-exon	FALSE	canonical	3	6218	junction_3	145.522812262851	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTAGACCTTCTGGAATC	92746622	True	NA	NA	False	ATTAAA	-23	NA	92832085	92835293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92832118_92833388_92833459_92833544_92833661_92834778
transcript_77942.known	chr2	+	992	4	FSM	ENSG00000163032.12	ENST00000404666.6	992	4	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	385.451250700613	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTGCTTCTTGTGTTTGAA	17539092	True	NA	13	True	TATAAA	-4	NA	17539125	17655528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17539403_17592069_17592237_17649409_17649626_17655196
transcript_7795.known	chr1	+	271	2	FSM	ENSG00000122406.14	ENST00000644549.1	271	2	0	0	0	0	multi-exon	FALSE	canonical	3	7618	junction_1	0	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATTTCTGTGTTAAGCTCT	92840110	False	NA	32	True	AATAAA	-15	NA	92840524	92841921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_92840640_92841765
transcript_77972.known	chr2	-	5240	28	FSM	ENSG00000163029.16	ENST00000448223.7	5240	28	0	0	0	0	multi-exon	TRUE	canonical	3	34	junction_26	66.8155949695769	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747576	True	NA	1	True	AATAAA	-19	NA	17753810	17663811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17752977_17753065_17753625
transcript_77973.known	chr2	-	5173	27	FSM	ENSG00000163029.16	ENST00000351948.8	5173	27	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_26	38.8074635961851	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAGGTCATGCTTTTGTGA	-17747596	True	NA	1	True	AATAAA	-19	NA	17753830	17663811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_17665614_17666419_17666518_17670422_17670576_17678858_17678965_17683637_17683764_17695151_17695298_17696288_17696427_17700207_17700379_17701828_17701910_17703156_17703293_17707218_17707380_17708638_17708754_17714860_17715066_17716085_17716265_17716740_17716906_17717087_17717177_17718076_17718224_17720939_17721039_17721141_17721262_17725256_17725359_17726388_17726470_17731077_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_77986.nic	chr2	-	1064	6	ISM	ENSG00000163029.16	ENST00000351948.8	5173	27	-3	66958	-3	10852	5prime_fragment	FALSE	canonical	3	176	junction_5	38.869010792661	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCTGGGTGTGGTGGCGG	-17747599	True	NA	NA	False	AATACA	-16	NA	17753833	17730769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17731140_17731740_17731878_17738220_17738327_17741611_17741730_17745826_17745952_17753625
transcript_77987.nic	chr2	-	456	2	ISM	ENSG00000163029.16	ENST00000621152.4	500	4	-1	11192	0	-11135	5prime_fragment	FALSE	canonical	3	46	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAAATCTCCTGACTTTTA	-17747596	True	NA	NA	False	AATATA	-23	NA	17753830	17752813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_17753065_17753625
transcript_77988.known	chr2	+	9854	14	FSM	ENSG00000178295.15	ENST00000317402.11	9854	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	17.8172843413853	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAGATGCCAGATGCCAG	17753210	True	NA	NA	False	ATTAAA	-21	NA	17753857	17788941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17753968_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_7799.known	chr1	+	4046	16	FSM	ENSG00000143033.18	ENST00000545708.5	4046	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.157910144091	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066732	True	NA	36	True	ATTAAA	-39	NA	93079234	93139079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_77990.known	chr2	+	9957	14	FSM	ENSG00000178295.15	ENST00000381254.7	9957	14	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	13.1828290684709	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGCCAGATGCCAGAAGCC	17753164	True	NA	NA	False	ATTAAA	-26	NA	17754137	17788946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896_17765074_17766578_17766690_17768737_17768812_17771195_17771288_17772633_17772785_17773095_17773133_17773218_17773300_17774270_17774402_17778001_17778064_17779977_17780122_17780620
transcript_77995.known	chr2	+	593	4	FSM	ENSG00000178295.15	ENST00000524465.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	15.5777619273972	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGGGTTCAGGCTGCTGGG	17753173	True	NA	NA	False	NA	NA	NA	17754146	17764927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17754346_17759928_17760105_17761395_17761583_17764896
transcript_77996.known	chr2	+	2341	3	FSM	ENSG00000170745.12	ENST00000304101.9	2341	3	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_2	7	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGTCTTGGTTGTATGTT	17877190	True	NA	9	True	AATAAA	-20	NA	17878666	17932958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_17878807_17917679_17917872_17930949
transcript_77997.known	chr2	-	819	1	FSM	ENSG00000260331.1	ENST00000565944.1	819	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTATATTTGGAAGTTGCC	-18548190	False	NA	NA	False	AATAAA	-19	NA	18548204	18547385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_18547400_18548200
transcript_77998.known	chr2	-	1560	2	FSM	ENSG00000240857.2	ENST00000381249.4	1560	2	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGCATTTCTTTGGAGGC	-18558778	True	NA	-6	True	AATAAA	-22	NA	18560653	18554722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_18555809_18560179
transcript_77999.known	chr2	-	737	2	FSM	ENSG00000240857.2	ENST00000468071.1	737	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGAACTTGTTACTTGAA	-18560619	False	NA	NA	False	TATAAA	-41	NA	18560679	18555121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_18555809_18560629
transcript_78.known	ERCC-00162	+	507	1	FSM	ERCC-00162A	DQ516750	507	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	459	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00162_+_0_500
transcript_78002.known	chr2	-	1906	3	FSM	ENSG00000143867.7	ENST00000272223.3	1906	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGGATGGGTAATTTCC	-19358583	True	NA	NA	False	AATAAA	-18	NA	19358623	19351484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_19352411_19353140_19353838_19358340
transcript_78003.nic	chr2	+	503	2	ISM	ENSG00000228784.9	ENST00000607100.5	2239	5	-15	7503	-15	-2640	5prime_fragment	FALSE	canonical	1	2	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGAGCATTTCCAGGTGG	19868774	True	NA	NA	False	AATAGA	-34	NA	19868844	19869890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_19868953_19869495
transcript_78006.nnic	chr2	-	1147	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	588	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-19901849	True	NA	-2	True	AATAAA	-18	NA	19901959	19896630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_78007.known	chr2	-	941	3	FSM	ENSG00000183891.6	ENST00000333610.4	941	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	74	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTTGTTAATATTGTGCC	-19901873	True	NA	-2	True	AATAAA	-18	NA	19901983	19896630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_19897127_19897868_19898036_19901705
transcript_78009.nnic	chr2	-	1024	3	NNC	ENSG00000183891.6	novel	941	3	NA	NA	-3	-111	at_least_one_novel_splicesite	FALSE	canonical	3	101	junction_2	38	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATGTGTGGTATTTTCTT	-19901849	True	NA	-24	True	ATTAAA	-15	NA	19901959	19896753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_19897127_19897868_19898036_19901475
transcript_78014.known	chr2	-	6898	27	FSM	ENSG00000118965.16	ENST00000281405.9	6898	27	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_6	16.3887679822594	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTGTTTATTCCACG	-19987248	True	NA	-1	True	AATAAA	-16	NA	19990105	19910262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_19913709_19914036_19914278_19930395_19930553_19931268_19931410_19932282_19932448_19933400_19933512_19935470_19935604_19936218_19936366_19937742_19937947_19938264_19938402_19941758_19941840_19945785_19945997_19946460_19946571_19948163_19948218_19951414_19951485_19953833_19953979_19960553_19960615_19966723_19966910_19969479_19969606_19973562_19973709_19974467_19974634_19975529_19975664_19978750_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_78019.nic	chr2	-	913	5	ISM	ENSG00000118965.16	ENST00000414212.5	3483	28	-109	64858	-52	-30244	5prime_fragment	FALSE	canonical	3	125	junction_1	4.76969600708473	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTGGTCGTTTTTATTG	-19987300	True	NA	NA	False	AATATA	-20	NA	19990157	19978415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_19978880_19980690_19980784_19982462_19982535_19989164_19989283_19989991
transcript_78020.nnic	chr2	-	1818	3	NNC	ENSG00000118965.16	novel	6898	27	NA	NA	25	3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	63.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTTTATTCCACGTTT	-19987223	True	NA	2	True	AATAAA	-19	NA	19990080	19910259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_19911919_19989212_19989283_19989991
transcript_78021.known	chr2	+	1132	3	FSM	ENSG00000227210.2	ENST00000416575.2	1132	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTGAAATAAATTATATTG	19990119	True	NA	NA	False	AATAAA	-19	NA	19990210	20004795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_19990495_19999205_19999278_20004019
transcript_78022.nnic	chr2	+	851	3	NNC	ENSG00000227210.2	novel	1132	3	NA	NA	-17	-3	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	0.5	5	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAGTGTGAAATAAATTATA	19990100	True	NA	NA	False	AATAAA	-16	NA	19990191	20004792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_19990495_19999205_19999278_20004316
transcript_78037.known	chr2	-	1365	7	FSM	ENSG00000068697.7	ENST00000175091.5	1365	7	0	0	0	0	multi-exon	FALSE	canonical	3	3000	junction_3	260.065002558121	20575	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTGTCATTGTTTTTAAT	-20025240	True	NA	-17	True	AATAAA	-17	NA	20051628	20032649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20033280_20034316_20034416_20034966_20035063_20037315_20037439_20037537_20037615_20040890_20041012_20051409
transcript_78038.known	chr2	+	573	2	FSM	ENSG00000223734.3	ENST00000452342.3	598	2	20	5	0	-5	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGCTCTCCAGTCTCTTCT	20052102	False	NA	NA	False	AATACA	-18	NA	20052133	20054496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_20052495_20054284
transcript_78040.nnic	chr2	-	341	2	Genic_Genomic	ENSG00000055917.16	novel	525	5	NA	NA	-71	-30920	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTATTTTCAACTTGTTT	-20350278	False	3108	NA	False	AATAAA	-17	NA	20350372	20349512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_20349590_20350108
transcript_78041.known	chr2	-	6309	21	FSM	ENSG00000055917.16	ENST00000361078.7	6309	21	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_20	151.933735555998	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGTCTTGTGTTTTTCTC	-20347736	True	NA	-10	True	AATAAA	-1	NA	20350844	20248736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20251717_20253821_20254015_20254862_20254985_20255215_20255342_20256032_20256171_20258242_20258372_20260336_20260467_20263192_20263461_20278582_20278820_20282946_20283232_20283342_20283487_20290651_20290791_20294375_20294519_20297552_20297679_20307977_20308072_20308313_20308585_20311493_20311664_20312235_20312424_20318536_20318646_20327309_20327379_20350596
transcript_78043.known	chr2	-	510	1	FSM	ENSG00000279307.2	ENST00000624084.2	510	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	18	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGCATTATGGTCAAATCTT	NA	False	NA	NA	False	AATGAA	-4	NA	20529976	20529466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20529500_20530000
transcript_78046.known	chr2	-	2383	7	FSM	ENSG00000118960.13	ENST00000304031.8	2383	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	6.64371047599825	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTCTTGGATATAATTCT	-20649616	True	NA	-14	True	AATAAA	-19	NA	20651098	20617817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20619246_20623895_20624032_20624731_20624893_20638435_20638653_20640972_20641181_20645339_20645506_20651031
transcript_78047.known	chr2	-	1375	3	FSM	ENSG00000118960.13	ENST00000406618.3	1375	3	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	7	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGAAGAGAAGCAAAACTGG	-20649602	True	NA	NA	False	AATAAA	-25	NA	20651084	20640024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20641181_20645339_20645506_20651031
transcript_78049.known	chr2	-	2045	9	FSM	ENSG00000118961.15	ENST00000381090.7	2045	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	41.0089548147719	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAAACCCCACCATGCT	-20820505	True	NA	-30	True	NA	NA	NA	20823114	20684043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20684924_20685546_20685658_20686906_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_78058.known	chr2	-	3917	7	FSM	ENSG00000118961.15	ENST00000237822.8	3917	7	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_5	9.322910847298	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGCTATCTCCTGCATCC	-20820492	True	NA	-17	True	TTTAAA	-7	NA	20823101	20684030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_78061.known	chr2	-	3807	6	FSM	ENSG00000118961.15	ENST00000541941.5	3807	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	39.1438373182804	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820521	True	NA	0	True	TTTAAA	-24	NA	20823130	20684013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20790254_20790399_20823036
transcript_78062.known	chr2	-	1179	6	FSM	ENSG00000118961.15	ENST00000626491.2	1179	6	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	35.0119979435621	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTATTTTGGTAGGCAGGA	-20820492	True	NA	NA	False	NA	NA	NA	20823101	20686624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20801309_20801466_20823036
transcript_78063.known	chr2	-	3728	6	FSM	ENSG00000118961.15	ENST00000440866.6	3728	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	32.1185304769692	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820521	True	NA	0	True	TTTAAA	-24	NA	20823130	20684013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20774809_20774980_20790254_20790399_20801309_20801466_20823036
transcript_78065.known	chr2	-	3663	5	FSM	ENSG00000118961.15	ENST00000619656.4	3663	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_4	43.6427256252402	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCGTGTCTCATTGCTTCTT	-20820521	True	NA	0	True	TTTAAA	-24	NA	20823130	20684013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_20687095_20701569_20701653_20739970_20740206_20774809_20774980_20823036
transcript_78072.known	chr2	+	6022	7	FSM	ENSG00000173960.14	ENST00000309033.5	6022	7	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_4	27.5962960477589	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTACCCTTGTTATAAAATA	23935283	True	NA	20	True	ATTAAA	-17	NA	23940462	24004909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_23940649_23958300_23958356_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_78081.known	chr2	+	2195	8	FSM	ENSG00000173960.14	ENST00000446425.2	2195	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	94.5500623252798	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAAAGCCTATTCCCTTTC	23926898	True	NA	3	True	AATAAA	-16	NA	23927284	24000820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_23927616_23958300_23958356_23968918_23969036_23971275_23971415_23976968_23977076_23982895_23983034_23984672_23984832_23999671
transcript_78097.known	chr2	-	3848	4	FSM	ENSG00000163026.12	ENST00000295148.9	3848	4	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	19.2584757675391	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-24045481	True	NA	-15	True	AATAAA	-15	NA	24047391	24029346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24031163_24032828_24032947_24037676_24039513_24047313
transcript_78102.known	chr2	+	925	4	FSM	ENSG00000119782.14	ENST00000380986.9	925	4	0	0	0	0	multi-exon	FALSE	canonical	3	580	junction_3	156.597147696459	1446	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044754	True	NA	19	True	AATAAA	-19	NA	24049740	24063681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063063
transcript_78103.known	chr2	+	1010	4	FSM	ENSG00000119782.14	ENST00000380991.8	1010	4	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_3	213.830670287392	921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044714	True	NA	19	True	AATAAA	-19	NA	24049700	24063681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24060813_24060927_24063018
transcript_78104.known	chr2	+	953	5	FSM	ENSG00000119782.14	ENST00000452109.1	953	5	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_2	340.95087622706	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGACAAACTCCTGTCCA	24044784	True	NA	9	True	AATAAA	-9	NA	24049770	24063671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24054472_24054541_24060813_24060927_24063063
transcript_78105.known	chr2	+	1137	6	FSM	ENSG00000119782.14	ENST00000438630.5	1137	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	311.078510990393	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24044744	True	NA	19	True	AATAAA	-19	NA	24049730	24063681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24049887_24053901_24053950_24054103_24054193_24054472_24054541_24060813_24060927_24063018
transcript_78106.known	chr2	+	859	4	FSM	ENSG00000119782.14	ENST00000421839.1	859	4	0	0	0	0	multi-exon	FALSE	canonical	3	169	junction_2	193.044036426925	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCTGTCCATCCTTATTTT	24053897	True	NA	19	True	AATAAA	-19	NA	24053910	24063681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24053950_24054103_24054193_24060813_24060927_24063063
transcript_78107.known	chr2	-	3700	3	FSM	ENSG00000163026.12	ENST00000406895.3	3700	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	86	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGGCTGTTTTGGATGTT	-24045451	True	NA	-15	True	AATAAA	-15	NA	24047361	24029346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24031163_24037676_24039513_24047313
transcript_78111.known	chr2	-	651	4	FSM	ENSG00000115128.7	ENST00000233468.5	651	4	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_3	73.9233837609363	9796	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTCAGTCTTTTCTCTTG	-24058901	True	NA	-7	True	AATAAA	-20	NA	24076326	24067585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24067852_24068320_24068460_24074075_24074195_24076199
transcript_78112.known	chr2	-	720	2	FSM	ENSG00000115128.7	ENST00000478050.1	720	2	0	0	0	0	multi-exon	FALSE	canonical	3	2549	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAGAGTATAAAAGTAACA	-24058948	True	NA	NA	False	AATAAA	-7	NA	24076373	24073648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24074195_24076199
transcript_78114.known	chr2	+	1369	11	FSM	ENSG00000219626.9	ENST00000615575.5	1369	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	5.86174035590114	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAAGTGTCCATCTCTGTAT	24123205	True	NA	4	True	AATAAA	-20	NA	24123468	24169638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24123534_24124329_24124461_24135118_24135188_24137908_24138101_24139369_24139451_24146747_24146836_24146929_24147087_24161505_24161614_24164197_24164336_24167626_24167684_24169355
transcript_7816.known	chr1	+	4075	15	FSM	ENSG00000143033.18	ENST00000370298.9	4075	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	171.839091796331	388	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTAATGAGTTTTGCTTCTG	93066780	True	NA	33	True	ATTAAA	-36	NA	93079282	93139076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_78170.known	chr2	-	1635	6	FSM	ENSG00000115129.14	ENST00000335934.8	1635	6	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_5	48.4916487655349	1057	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTGGCACGCGGACTGGGG	-24085205	False	NA	-7	True	AATAAA	-14	NA	24085215	24077432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24077762_24079443_24079641_24080818_24081032_24082884_24083153_24084188_24084332_24084730
transcript_78171.known	chr2	-	677	3	FSM	ENSG00000115129.14	ENST00000413037.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	6	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGTGCTGTGTATCAGTC	-24084301	False	NA	0	True	AATAAA	-22	NA	24084311	24080745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24081032_24082884_24083153_24084188
transcript_78172.known	chr2	+	362	2	FSM	ENSG00000219626.9	ENST00000611138.1	362	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTAAGTGTCCATCTCTGTA	NA	False	NA	3	True	AATAAA	-19	NA	24164255	24169637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24164336_24169355
transcript_78173.known	chr2	+	232	2	FSM	ENSG00000242628.6	ENST00000413989.5	232	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCATGCATATGGCTTTGG	NA	False	NA	NA	False	AATAAA	-12	NA	24214380	24221506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24214426_24221319
transcript_78177.known	chr2	+	4085	8	FSM	ENSG00000138092.11	ENST00000260662.2	4085	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	69.4732366616447	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATATTTACGTGGTGCTGGTG	24788297	True	NA	13	True	AATAAA	-16	NA	24793461	24822373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24793521_24793851_24793966_24799674_24799845_24814375_24814494_24815496_24815757_24816645_24816818_24817669_24817842_24819353
transcript_78182.known	chr2	+	1579	5	FSM	ENSG00000138092.11	ENST00000491031.5	1579	5	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	61.8157544643758	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGAAGGGTCAGTAAACAC	24788235	True	NA	NA	False	NA	NA	NA	24793399	24816571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375_24814494_24815496
transcript_78188.known	chr2	+	748	4	FSM	ENSG00000138092.11	ENST00000486527.6	748	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	65.8685559783017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTCTTTACTGCTGGCTTG	24788280	True	NA	NA	False	NA	NA	NA	24793444	24814782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24793502_24793851_24793966_24799674_24799845_24814375
transcript_78196.known	chr2	-	865	3	FSM	ENSG00000184924.6	ENST00000480190.1	865	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTGCTCAAATAGAAGATTT	-24786168	False	6885	NA	False	NA	NA	NA	24793053	24790204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24792383_24792585_24792766
transcript_78197.known	chr2	-	624	2	FSM	ENSG00000184924.6	ENST00000474668.1	624	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTTCCTCTTATTAATAAG	-24786189	False	NA	NA	False	ATTAAA	-16	NA	24793074	24790265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24792766
transcript_78198.known	chr2	-	424	2	FSM	ENSG00000184924.6	ENST00000467797.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCTCTTATTAATAAGTTC	-24784721	False	NA	NA	False	ATTAAA	-19	NA	24791606	24790262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24791501
transcript_78200.known	chr2	-	1014	2	FSM	ENSG00000184924.6	ENST00000487316.1	1014	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATAACTACTTCCTCTT	-24786205	False	NA	NA	False	ATTAAA	-7	NA	24793090	24790274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24792383
transcript_78201.known	chr2	-	1120	2	FSM	ENSG00000184924.6	ENST00000328379.6	1120	2	0	0	0	0	multi-exon	FALSE	canonical	3	1200	junction_1	0	3145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTCTTGTCATTTCA	-24786506	False	NA	1	True	AATGAA	-18	NA	24793391	24789727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24790582_24793125
transcript_78207.known	chr2	-	561	5	FSM	ENSG00000115137.12	ENST00000468467.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	4.14578098794425	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCAACAAGGTAACCCCTC	-24971410	False	77	NA	False	NA	NA	NA	24971613	24957819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_24957975_24958546_24958602_24963404_24963475_24967210_24967294_24971415
transcript_78209.known	chr2	+	255	2	FSM	ENSG00000224165.7	ENST00000421842.2	348	2	91	2	18	-2	multi-exon	FALSE	canonical	2	6	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTTTTTTCAGTGAATAT	24972103	True	NA	NA	False	AATAAA	-22	NA	24972182	24972830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_24972233_24972625
transcript_78212.known	chr2	-	3589	19	FSM	ENSG00000119772.19	ENST00000380746.8	3589	19	0	0	0	0	multi-exon	TRUE	canonical	3	111	junction_17	115.484125893273	860	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTGCTTTCCTGTCTAAG	-25252294	False	NA	-22	True	AATAAA	-18	NA	25252311	25232975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25249656_25249725_25252193
transcript_78216.known	chr2	-	3585	18	FSM	ENSG00000119772.19	ENST00000683760.1	3585	18	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_17	106.867637952387	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACCCCACCTGGAGCAAATA	-25252115	False	NA	-61	True	NA	NA	NA	25252132	25233014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25251911
transcript_78217.known	chr2	-	2300	18	FSM	ENSG00000119772.19	ENST00000402667.1	2300	18	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_17	66.7713134848961	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGAGGATGGAGAGAAGTAT	-25252294	False	NA	-42	True	AATAAA	-12	NA	25252311	25234196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25234421_25235706_25235826_25236935_25237006_25239129_25239216_25240301_25240451_25240639_25240731_25241561_25241708_25243897_25243983_25244154_25244339_25244539_25244653_25245252_25245333_25246019_25246065_25246159_25246310_25246619_25246777_25247050_25247159_25247590_25247750_25248036_25248253_25252193
transcript_78231.known	chr2	-	2464	20	FSM	ENSG00000138101.20	ENST00000288642.12	2464	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	66.5507949633159	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCTCTTGTGTGTTTGTGA	NA	False	NA	-24	True	AAAAAG	-5	NA	25673647	25377244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_78232.known	chr2	-	2420	20	FSM	ENSG00000138101.20	ENST00000407661.7	2420	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	75.5018298837152	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTGTGTGTTTGTGACC	-25668336	True	NA	-22	True	AAAAAG	-7	NA	25673634	25377242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25377554_25379289_25379324_25387288_25387379_25388201_25388362_25419514_25419536_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25455404_25455495_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_78233.known	chr2	-	2275	19	FSM	ENSG00000138101.20	ENST00000407186.5	2275	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	73.1383772189555	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGAAAAAGCACCAAGCTCT	-25668263	True	NA	-37	True	NA	NA	NA	25673561	25377257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25377554_25379289_25379324_25383835_25383890_25387288_25387379_25388201_25388362_25427534_25427632_25432885_25433000_25433909_25433996_25451547_25451636_25482795_25482874_25531472_25531598_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_78237.nnic	chr2	-	1275	9	NNC	ENSG00000138101.20	novel	1002	6	NA	NA	-3	18327	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	95.7822236899938	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTGTATATCTTCATTT	-25668266	True	NA	-1	True	AATAAA	-19	NA	25673564	25558188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_25558408_25576837_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_78239.nic	chr2	-	1666	8	ISM	ENSG00000138101.20	ENST00000407186.5	2275	19	-3	198970	-3	288	5prime_fragment	FALSE	canonical	0	0	junction_4	82.0447861766701	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAACAAAACTGTTCAAG	-25668266	True	NA	NA	False	NA	NA	NA	25673564	25576227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_25577005_25580720_25580827_25596085_25596241_25607235_25607322_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_78244.known	chr2	-	1002	6	FSM	ENSG00000138101.20	ENST00000493538.5	1002	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.9534622854796	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTCACACCTGTAATCCC	-25668131	False	NA	NA	False	AAAAAG	-42	NA	25673429	25576515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25577005_25580720_25580827_25628170_25628385_25639013_25639095_25652593_25652662_25673385
transcript_78246.nic	chr2	-	781	4	ISM	ENSG00000143970.18	ENST00000336112.9	8886	12	-89	61645	-68	-30575	5prime_fragment	FALSE	canonical	0	0	junction_2	21.2289111041209	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCCTTGTTAGTAGTTCCT	NA	False	NA	3	True	AATAAA	-23	NA	25878555	25799336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_25799536_25806228_25806338_25845480_25845564_25878165
transcript_78247.known	chr2	-	413	3	FSM	ENSG00000143970.18	ENST00000682588.1	413	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	21	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTGGAGGATTGCTTG	-25875870	True	NA	NA	False	NA	NA	NA	25878484	25844765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25844777_25845480_25845564_25878165
transcript_78248.known	chr2	-	8886	12	FSM	ENSG00000143970.18	ENST00000336112.9	8886	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	12.0707282025089	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAACCTTGGAGTT	-25875852	True	NA	-28	True	ATTAAA	-5	NA	25878466	25737691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25744477_25749695_25750414_25753533_25753640_25756017_25756115_25759481_25759646_25767582_25767727_25768741_25768869_25771439_25771541_25799384_25799536_25806228_25806338_25845480_25845564_25878165
transcript_78249.known	chr2	-	5342	8	FSM	ENSG00000084731.15	ENST00000264712.8	5342	8	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	21.4675835355809	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGACTGCCTTACTTCTCT	-25981497	True	NA	-12	True	AATAAA	-21	NA	25982497	25926597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_25929072_25929304_25929478_25929954_25930064_25951788_25951906_25954266_25954386_25955540_25955664_25956342_25956445_25980372
transcript_7825.known	chr1	+	1951	14	FSM	ENSG00000143033.18	ENST00000370303.4	1951	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.338988774662	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGATGATACTAGCCTTAA	93066808	True	NA	-51	True	AAAAAG	-19	NA	93079310	93137151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_78254.nnic	chr2	+	1085	2	NNC	ENSG00000084733.11	novel	1292	5	NA	NA	-170	-41183	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	0	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTATGAAAAATTTACTA	26033885	True	NA	9	True	AATAAA	-21	NA	26033913	26093853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_26034736_26093590
transcript_78255.known	chr2	+	3561	6	FSM	ENSG00000084733.11	ENST00000264710.5	3561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1306	junction_3	85.2797748589899	753	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGTGGTTTGGTTTTCA	26034049	False	NA	14	True	TATAAA	-19	NA	26034083	26137454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26034736_26098661_26098723_26109767_26109907_26127143_26127234_26127849_26127952_26134937
transcript_78256.known	chr2	+	1292	5	FSM	ENSG00000084733.11	ENST00000495146.5	1292	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	594.771384651279	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTGTATAAGAATAAAGTT	26024242	True	NA	22	True	ATTAAA	-33	NA	26034106	26135347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26034736_26098661_26098723_26127143_26127234_26127849_26127952_26134937
transcript_78270.known	chr2	+	1997	16	FSM	ENSG00000138029.14	ENST00000317799.10	1997	16	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_12	39.3307343774136	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	26242122	True	NA	14	True	AATAAA	-17	NA	26244938	26290465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_78275.nnic	chr2	+	1952	15	NIC	ENSG00000138029.14	novel	1997	16	NA	NA	-24	0	combination_of_known_splicesites	FALSE	canonical	3	34	junction_12	136.103745693632	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGTTTACCTCATTTTT	26242079	True	NA	14	True	AATAAA	-17	NA	26244895	26290465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284882_26284958_26285406_26285572_26289917
transcript_78276.known	chr2	+	2142	15	FSM	ENSG00000138029.14	ENST00000537713.5	2142	15	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	141.73093580184	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAACTGTTTACCTCATTTT	26244737	True	NA	13	True	AATAAA	-16	NA	26244747	26290464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26273650_26273751_26277072_26277161_26278613_26278802_26279134_26279316_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_78280.known	chr2	+	1588	14	FSM	ENSG00000138029.14	ENST00000405867.7	1588	14	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	140.256147752063	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTTAGATACATAAATATGG	26242109	True	NA	-39	True	TATAAA	-5	NA	26244925	26290412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429_26254475_26263379_26263480_26269952_26269998_26273650_26273751_26277072_26277161_26279993_26280116_26282844_26282925_26283003_26283052_26284116_26284205_26284882_26284958_26285406_26285572_26289917
transcript_78290.known	chr2	+	670	3	FSM	ENSG00000138029.14	ENST00000479347.1	670	3	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_1	13.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATATGAAATGAAAGAGTAA	26242103	True	NA	NA	False	AATAGA	-41	NA	26244919	26254956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26244991_26254246_26254319_26254429
transcript_78292.known	chr2	-	2943	20	FSM	ENSG00000084754.12	ENST00000380649.8	2943	20	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_11	71.4999176723079	754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTCATTGTGTGATCTT	-26231947	True	NA	-7	True	ATTAAA	-20	NA	26244632	26190634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244529
transcript_78293.known	chr2	-	2688	20	FSM	ENSG00000084754.12	ENST00000643233.1	2688	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	235.656435682691	466	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACCAAACTCTGTGTCAGCA	-26231941	True	NA	-28	True	AATAAA	-1	NA	26244626	26190888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26191396_26191482_26191629_26192309_26192425_26193576_26193773_26194569_26194639_26195091_26195233_26197690_26197778_26201148_26201321_26204061_26204197_26209779_26209890_26212569_26212627_26214442_26214562_26215052_26215176_26230191_26230295_26232159_26232280_26234216_26234356_26236854_26236989_26238933_26239005_26239101_26239144_26244524
transcript_78295.nnic	chr2	+	903	4	Fusion	ENSG00000138018.19_ENSG00000286707.1	novel	2567	2	NA	NA	-263	2908	multi-exon	FALSE	canonical	1	1	junction_2	8.83176086632785	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTTCAGAGAAACCAA	26298278	False	NA	NA	False	ATTAAA	-19	NA	26298306	26309248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_26298627_26303830_26304123_26308550_26308658_26309064
transcript_78297.known	chr2	+	2567	2	FSM	ENSG00000286707.1	ENST00000653720.1	2567	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAATTAAATAATTCCTCCT	26298558	True	NA	-13	True	TTTAAA	-30	NA	26298569	26306340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26298627_26303830
transcript_78298.known	chr2	+	2717	2	FSM	ENSG00000286707.1	ENST00000661577.1	2717	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCATCTAAATAATTAAATAA	26299850	True	NA	-21	True	TTTAAA	-22	NA	26299913	26306332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26300129_26303830
transcript_78300.known	chr2	+	8066	10	FSM	ENSG00000138018.19	ENST00000260585.12	8066	10	0	0	0	0	multi-exon	TRUE	canonical	3	64	junction_7	13.0639452948436	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTCAGATTGTCTTCT	26341181	True	NA	24	True	AATAAA	-31	NA	26346142	26395885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039_26375149_26383298_26383348_26384958_26385140_26386353_26386537_26389004
transcript_78304.nic	chr2	+	1818	6	ISM	ENSG00000138018.19	ENST00000260585.12	8066	10	-90	19781	-90	2598	5prime_fragment	FALSE	canonical	3	79	junction_3	8.95767827062348	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAATAAATAAAAAAT	26341091	True	NA	NA	False	NA	NA	NA	26346052	26376104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_26346290_26364301_26364371_26364831_26364941_26367145_26367221_26373366_26373630_26375039
transcript_78305.nnic	chr2	+	549	3	Fusion	ENSG00000138018.19_ENSG00000286707.1	novel	2567	2	NA	NA	-201	2908	multi-exon	FALSE	canonical	1	3	junction_1	2	27	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATTTTCAGAGAAACCAA	26298340	False	NA	NA	False	ATTAAA	-19	NA	26298368	26309248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_26298627_26308550_26308658_26309064
transcript_78307.known	chr2	+	424	2	FSM	ENSG00000138018.19	ENST00000462301.1	424	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCGTCTTGGGCACGTCAT	26341216	True	NA	NA	False	NA	NA	NA	26346177	26346900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26346290_26346588
transcript_7831.known	chr1	+	1937	14	FSM	ENSG00000143033.18	ENST00000471953.5	1937	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	230.007872260441	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGGAGTCTGGCTTTTACT	93066807	True	NA	NA	False	NA	NA	NA	93079309	93137089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_78310.known	chr2	-	292	1	FSM	ENSG00000225024.1	ENST00000418887.1	292	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTTCAATGATTAGTCAT	NA	False	NA	NA	False	NA	NA	NA	26678510	26678218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_26678200_26678500
transcript_78312.known	chr2	+	3902	6	FSM	ENSG00000213699.9	ENST00000344420.10	3902	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	5.16139516022558	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCACAGTTCTGCAGGCTATA	26762810	True	NA	20	True	TATAAA	-20	NA	26764283	26781231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26764427_26774250_26774324_26775043_26775216_26775463_26775677_26776371_26776483_26778041
transcript_78315.known	chr2	+	3605	5	FSM	ENSG00000213699.9	ENST00000414029.1	3605	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	9.8836987003854	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTATTAATCCATTCTCGA	26762851	True	NA	16	True	AAAAAG	-18	NA	26764324	26781147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26764427_26774250_26774324_26775463_26775677_26776371_26776483_26778041
transcript_78316.known	chr2	+	689	5	FSM	ENSG00000115163.15	ENST00000472719.5	689	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	242.508118420807	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATTTTGAAAACATCAGAT	26781008	True	NA	-88	True	NA	NA	NA	26786026	26794076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26786081_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_78319.nnic	chr2	+	388	4	NNC	ENSG00000213699.9	novel	3902	6	NA	NA	-18	918	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	11.8977121983832	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCACGCCTGTA	26762792	True	NA	2	True	AATAAA	-14	NA	26764265	26782149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_26764427_26774250_26774324_26775043_26775131_26782082
transcript_78320.known	chr2	+	1389	5	FSM	ENSG00000115163.15	ENST00000335756.9	1389	5	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_3	64.6722506180201	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTTACTGTTACAGCAT	26781037	True	NA	NA	False	AATAAA	-22	NA	26786055	26794589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_26786297_26792130_26792241_26792755_26792834_26793144_26793327_26793811
transcript_78321.known	chr2	+	2978	17	FSM	ENSG00000119777.20	ENST00000238788.14	2978	17	0	0	0	0	multi-exon	FALSE	canonical	2	269	junction_10	29.0446181546599	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	27026976	True	NA	19	True	AATAAA	-21	NA	27032964	27041694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710
transcript_78326.known	chr2	+	2700	18	FSM	ENSG00000119777.20	ENST00000321326.11	2700	18	0	0	0	0	multi-exon	TRUE	canonical	1	7	junction_17	84.664695869315	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATTCTTGTCTGCATCCTC	27026965	True	NA	19	True	AATAAA	-21	NA	27032953	27041694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27033167_27034066_27034267_27035134_27035286_27035593_27035729_27035969_27036053_27036486_27036593_27036704_27036787_27037076_27037179_27037560_27037703_27038145_27038238_27038483_27038533_27038701_27038816_27039046_27039165_27039740_27039838_27040029_27040199_27040344_27040497_27040710_27040955_27041243
transcript_78327.known	chr2	+	3188	15	FSM	ENSG00000084693.16	ENST00000360131.5	3188	15	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_13	119.51381100278	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGGTGTAGTTGCTTTGT	27045566	True	NA	8	True	AATAAA	-16	NA	27051667	27070618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189_27059405_27067493_27067647_27068631_27068745_27069572_27069707_27070091
transcript_78334.known	chr2	+	2382	11	FSM	ENSG00000084693.16	ENST00000323064.12	2382	11	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	35.3396378023318	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGCCTCTCCTACGAC	27045576	True	NA	16	True	AATAAA	-18	NA	27051677	27059535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681_27056139_27056622_27056793_27057302_27057439_27058399_27058603_27059189
transcript_78339.known	chr2	+	1850	7	FSM	ENSG00000084693.16	ENST00000489683.5	1850	7	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	30.4380062129934	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATGTCAAACTGAGAATT	27045579	True	NA	-81	True	AAAAAG	-23	NA	27051680	27056464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27051794_27052912_27053174_27053401_27053574_27053895_27054060_27054629_27054808_27055074_27055254_27055681
transcript_78346.known	chr2	-	442	3	FSM	ENSG00000228474.6	ENST00000456793.2	442	3	0	0	0	0	multi-exon	FALSE	canonical	3	3919	junction_2	486.5	49565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-27030255	True	NA	-1	True	TATAAA	-30	NA	27071654	27070471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27070722_27071325_27071464_27071600
transcript_78347.known	chr2	-	559	2	FSM	ENSG00000228474.6	ENST00000429985.1	559	2	0	0	0	0	multi-exon	FALSE	canonical	3	4892	junction_1	0	1874	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTGGTCCCAAAATCTTG	-27030250	True	NA	-16	True	TATAAA	-15	NA	27071649	27070486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27070722_27071325
transcript_78348.known	chr2	-	458	3	FSM	ENSG00000228474.6	ENST00000447619.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1957	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTGCTGCGGAGGGAGG	-27030250	True	NA	-1	True	TATAAA	-30	NA	27071649	27070471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27070743_27071325_27071464_27071600
transcript_78358.nnic	chr2	+	892	6	NNC	ENSG00000138030.13	novel	2411	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	72.670213980695	61	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085499	True	NA	8	True	AATAAA	-16	NA	27086739	27099969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_27086860_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_78360.nnic	chr2	+	1384	6	NIC	ENSG00000138030.13	novel	2411	8	NA	NA	-7	0	intron_retention	FALSE	canonical	3	72	junction_1	44.2429655425583	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTCTCCTCTCAATGTCTG	27085499	True	NA	8	True	AATAAA	-16	NA	27086739	27099969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27087352_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_78363.known	chr2	+	2411	8	FSM	ENSG00000138030.13	ENST00000260599.10	2411	8	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	54.539257532945	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATGTGTACAAGGCTCT	27085506	True	NA	20	True	TATAAA	-16	NA	27086746	27100751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27087352_27092331_27092449_27094476_27094612_27096728_27096802_27097502_27097650_27099195_27099285_27099419_27099578_27099664
transcript_78364.known	chr2	-	1177	7	NNC	ENSG00000138028.17	novel	1610	7	NA	NA	-5	34	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	10.3507917034828	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCCCCCCGGCCACCTCTCT	-27118687	False	NA	-8	True	AATAAA	-16	NA	27118910	27101078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27101462_27101512_27101889_27102096_27102222_27102359_27102431_27102525_27102592_27104286_27104378_27118845
transcript_78366.nnic	chr2	-	1954	10	NNC	ENSG00000138073.14	novel	2127	9	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_9	172.391314839521	113	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTACTCTTGTCAGCTGTT	-27125391	True	NA	-3	True	AATAAA	-29	NA	27134677	27130755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27131509_27131671_27131832_27132009_27132083_27132229_27132404_27132602_27132728_27132842_27132924_27133116_27133338_27133531_27133722_27134286_27134362_27134575
transcript_78369.nnic	chr2	+	987	5	NIC	ENSG00000143994.14	novel	1167	6	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0.82915619758885	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTGAGGTTCATTTTCC	27123802	True	NA	6	True	ATTAAA	-21	NA	27123832	27130812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27124063_27129513_27129627_27129753_27129928_27130226_27130417_27130532
transcript_78381.known	chr2	-	3213	17	FSM	ENSG00000138074.15	ENST00000310574.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_16	163.24464003452	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGCTCCTGTACTGTCT	-27210756	True	NA	0	True	AATAAA	-21	NA	27212268	27199586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27200580_27200997_27201114_27201349_27201454_27201665_27201848_27201987_27202075_27202812_27202881_27203232_27203346_27203778_27203868_27204460_27204591_27204790_27204932_27205349_27205505_27206025_27206094_27206482_27206535_27206876_27206943_27207257_27207791_27211466_27211534_27212019
transcript_78405.known	chr2	+	1059	7	FSM	ENSG00000138085.18	ENST00000405489.7	1059	7	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	610.948647596506	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAAGGCGCCCTGCCTTTA	27203516	False	NA	49	True	AATAAA	-37	NA	27212369	27217178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27212608_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_78415.known	chr2	+	1256	7	FSM	ENSG00000138085.18	ENST00000380171.9	1227	7	-10	-19	-10	-2	multi-exon	FALSE	canonical	3	1664	junction_1	165.946527532214	4489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGAAAGGCGCCCTGCCTT	27209216	True	NA	47	True	AATAAA	-35	NA	27212030	27217176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27212468_27213176_27213299_27215320_27215393_27215473_27215546_27215631_27215754_27216522_27216621_27216843
transcript_78416.known	chr2	+	198	2	FSM	ENSG00000138085.18	ENST00000491220.1	198	2	0	0	0	0	multi-exon	FALSE	canonical	3	1805	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCCAAAAGGCTAATATAATG	27204341	False	NA	NA	False	NA	NA	NA	27213194	27215414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27213299_27215320
transcript_78422.known	chr2	-	2936	8	FSM	ENSG00000115194.11	ENST00000233535.9	2936	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	7.38448456189719	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAATCAAA	-27262458	True	NA	NA	False	NA	NA	NA	27263047	27253683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27257904_27258059_27258160_27258308_27258752_27258935_27262811
transcript_78423.known	chr2	-	904	7	FSM	ENSG00000115194.11	ENST00000445870.5	904	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	13.8804418757713	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCCTGCAGGTCGAGCAG	-27262844	False	NA	NA	False	NA	NA	NA	27262871	27255385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27255461_27256385_27256521_27256787_27256894_27257153_27257353_27258160_27258308_27258752_27258935_27262811
transcript_78425.known	chr2	+	2027	10	FSM	ENSG00000138100.14	ENST00000296098.4	2027	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	8.93322277432968	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCTGGTGGCTCTGCCC	27282450	False	NA	13	True	ATTAAA	-18	NA	27282461	27307439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27299529_27299656_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_78427.known	chr2	+	1930	9	FSM	ENSG00000138100.14	ENST00000380075.7	1930	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	4.4087980221371	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACAGTGCCCTGGTGGCTCT	27282417	True	NA	9	True	ATTAAA	-14	NA	27282428	27307435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27282900_27298566_27298740_27299244_27299417_27304958_27305055_27305583_27305818_27306079_27306103_27306212_27306338_27306455_27306543_27306886
transcript_7843.known	chr1	+	3845	13	FSM	ENSG00000143033.18	ENST00000540243.5	3845	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	173.542181871984	344	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATGAGTTTTGCTTCTGTAT	93066732	True	NA	36	True	ATTAAA	-39	NA	93079234	93139079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_78466.known	chr2	-	1002	8	FSM	ENSG00000115204.15	ENST00000380044.6	1002	8	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_7	99.2995879309945	4332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317919	True	NA	-5	True	ATTAAA	-15	NA	27323097	27309491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_78467.known	chr2	-	905	8	FSM	ENSG00000115204.15	ENST00000426513.6	905	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_6	192.983873705043	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATATGGTGCCTCAGTA	-27317905	True	NA	-53	True	NA	NA	NA	27323083	27309539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_78468.known	chr2	-	906	7	FSM	ENSG00000115204.15	ENST00000402310.5	906	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	195.197051434925	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27317876	True	NA	-5	True	ATTAAA	-15	NA	27323054	27309491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_78469.known	chr2	-	998	7	FSM	ENSG00000115204.15	ENST00000233545.6	998	7	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_6	66.4897652942834	1312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGCAGTGGTAATGAGTAA	-27322554	False	NA	-5	True	ATTAAA	-15	NA	27322564	27309491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447
transcript_78470.known	chr2	-	827	6	FSM	ENSG00000115204.15	ENST00000402722.5	827	6	0	0	0	0	multi-exon	TRUE	canonical	1	9	junction_1	229.271542063118	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCCTCAGTAAATATGTTAT	-27317903	True	NA	-43	True	NA	NA	NA	27323081	27309529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27312493_27312590_27312679_27312773_27312993_27313075_27322447_27322523_27323051
transcript_78471.known	chr2	-	665	8	FSM	ENSG00000115204.15	ENST00000403262.6	665	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	194.553491935996	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATAGTGGCACTGAAGATGT	-27317889	True	NA	NA	False	AATAAA	-27	NA	27323067	27311494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27311678_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313110_27322447_27322523_27323051
transcript_78472.known	chr2	-	859	8	FSM	ENSG00000115204.15	ENST00000405983.5	859	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	205.345701544632	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATATCCCAGCAAATGCCAC	-27317885	True	NA	NA	False	CATAAA	-39	NA	27323063	27309645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27309982_27311898_27311952_27312213_27312247_27312493_27312590_27312679_27312773_27312993_27313155_27322447_27322523_27323051
transcript_78473.known	chr2	-	590	2	FSM	ENSG00000115204.15	ENST00000494436.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACAGTTTAAATGGCATTAA	-27317899	True	NA	NA	False	NA	NA	NA	27323077	27321958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27322523_27323051
transcript_78479.known	chr2	-	3882	19	FSM	ENSG00000115207.14	ENST00000264720.7	3882	19	0	0	0	0	multi-exon	FALSE	canonical	3	233	junction_18	58.9556225656109	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27357018	True	NA	-7	True	ATTAAA	-24	NA	27357034	27325848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356738
transcript_78482.known	chr2	-	3992	19	FSM	ENSG00000115207.14	ENST00000359541.6	3992	19	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_18	105.078923894916	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTACACGTCATGATTTT	-27356476	False	NA	-7	True	ATTAAA	-24	NA	27356492	27325848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27326894_27327176_27327285_27328036_27328190_27328467_27328597_27328843_27328932_27329120_27329283_27329378_27329524_27333654_27333785_27333973_27334000_27335597_27335707_27335916_27336029_27336197_27336426_27337243_27337343_27337480_27337559_27337925_27338021_27341947_27342234_27342825_27343148_27343307_27343579_27356086
transcript_78486.known	chr2	-	1771	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	15	-5	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_6	232.926328602442	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTCAGCAACTCTGCTGC	-27361660	True	NA	-11	True	AATAAA	-14	NA	27370300	27364362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367803_27367804_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370105
transcript_78502.known	chr2	-	1644	13	FSM	ENSG00000115211.17	ENST00000347454.9	1644	13	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	91.3665921804391	1133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27361698	True	NA	0	True	AATAAA	-25	NA	27370338	27364351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875_27369920_27370283
transcript_78503.known	chr2	-	1754	14	NNC	ENSG00000115211.17	novel	1644	13	NA	NA	-119	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_12	234.693858250683	256	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGCTGCCTTTGTTTCTC	-27370439	False	NA	0	True	AATAAA	-25	NA	27370457	27364351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369546_27369875_27369892_27369893_27369920_27370283
transcript_78504.known	chr2	-	1608	13	FSM	ENSG00000115211.17	ENST00000445933.6	1608	13	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_10	113.599687010523	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATGCCATACTCCCTAC	-27361694	True	NA	-29	True	NA	NA	NA	27370334	27364380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369210_27369413_27369550_27369875_27369920_27370283
transcript_78505.known	chr2	-	1949	12	FSM	ENSG00000115211.17	ENST00000493344.6	1949	12	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_10	94.3593447964388	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGGGGAAACACAGGGTTAAT	-27361686	True	NA	-47	True	NA	NA	NA	27370326	27364398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27364600_27364717_27364899_27366758_27366937_27367073_27367202_27367456_27367560_27367745_27367823_27368024_27368140_27368371_27368464_27368653_27368734_27369005_27369213_27369413_27369550_27369875
transcript_78509.known	chr2	-	2144	4	FSM	ENSG00000163795.14	ENST00000323703.11	2144	4	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	26.2339898266013	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27379015	True	NA	-43	True	AATAAA	-16	NA	27380734	27377234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27378372_27378466_27379055_27380092_27380249_27380471
transcript_78510.known	chr2	-	2077	3	FSM	ENSG00000163795.14	ENST00000407879.1	2077	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	30.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGTCTATGCTGAATTG	-27380308	False	1719	-43	True	AATAAA	-16	NA	27380444	27377234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27378372_27378466_27379055_27380092
transcript_78511.known	chr2	+	2007	16	FSM	ENSG00000115234.11	ENST00000427123.5	2007	16	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	377.221361478318	443	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTACCTCTGGTTCCCTCT	27361831	True	NA	16	True	ATTAAA	-16	NA	27370627	27377123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27370807_27371268_27371344_27372622_27372741_27373039_27373114_27373246_27373312_27373860_27373972_27374084_27374176_27374345_27374434_27374688_27374759_27375060_27375154_27375505_27375710_27375845_27375972_27376105_27376184_27376312_27376388_27376478_27376521_27376605
transcript_78512.known	chr2	-	2210	10	FSM	ENSG00000115241.11	ENST00000344034.5	2210	10	0	0	0	0	multi-exon	FALSE	canonical	3	808	junction_6	60.0351748745868	1629	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTACGCATCGTGTCCTTT	-27392543	True	NA	-6	True	ACTAAA	-14	NA	27409591	27381198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27381806_27382125_27382229_27382475_27382606_27383365_27383601_27383951_27384093_27384672_27385089_27385746_27385880_27386193_27386280_27387088_27387159_27409302
transcript_78523.known	chr2	+	2176	18	FSM	ENSG00000115216.14	ENST00000379852.8	2176	18	0	0	0	0	multi-exon	TRUE	canonical	3	206	junction_1	255.705374903081	2027	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCGTCGTGTGTTCGCGCCTT	27410616	True	NA	29	True	AATAAA	-20	NA	27428630	27442259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27428732_27433253_27433484_27433672_27433796_27433988_27434091_27434470_27434561_27434721_27434763_27435132_27435228_27436752_27436837_27437046_27437106_27437261_27437361_27439765_27439899_27440402_27440509_27440651_27440703_27440804_27440941_27441126_27441181_27441266_27441331_27441566_27441623_27441707
transcript_78524.known	chr2	-	1832	16	FSM	ENSG00000138002.16	ENST00000511842.5	1832	16	0	0	0	0	multi-exon	TRUE	canonical	3	24	junction_1	8.04874041215284	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAATTGGCAAATAAAGCTTA	-27488956	False	NA	-41	True	NA	NA	NA	27489678	27470812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27471096_27472249_27472363_27476640_27476727_27477216_27477321_27477558_27477613_27477994_27478157_27479508_27479605_27480025_27480150_27481045_27481261_27483288_27483377_27483579_27483660_27483871_27483938_27484226_27484267_27485017_27485131_27485359_27485504_27489614
transcript_7853.nic	chr1	+	1516	12	NIC	ENSG00000143033.18	novel	4075	15	NA	NA	-32	-10	intron_retention	FALSE	canonical	3	187	junction_3	131.431533255472	376	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAGAAAAAATCTGTAGG	93066700	True	NA	NA	False	NA	NA	NA	93079202	93133730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_93079532_93110229_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702
transcript_78532.known	chr2	+	872	7	FSM	ENSG00000157992.12	ENST00000288873.7	872	7	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_6	123.022694383326	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438692	True	NA	21	True	AATAAA	-21	NA	27442380	27444297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_78533.nic	chr2	+	904	7	NIC	ENSG00000157992.12	novel	872	7	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	3	164	junction_6	140.382809963803	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438657	True	NA	21	True	AATAAA	-21	NA	27442345	27444297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_78534.known	chr2	+	956	7	FSM	ENSG00000157992.12	ENST00000543753.5	956	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	185.200791934952	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTTCTGGGTCTTAGTTT	27438677	True	NA	5	True	ATTAAA	-18	NA	27442365	27446481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27446300
transcript_78542.known	chr2	+	665	6	FSM	ENSG00000157992.12	ENST00000453171.5	665	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	214.791619948265	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGATTATGATTCCTTT	27438709	True	NA	19	True	AATAAA	-19	NA	27442397	27444295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442441_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_78550.nic	chr2	+	1025	6	ISM	ENSG00000157992.12	ENST00000288873.7	872	7	-35	6	-20	0	intron_retention	FALSE	canonical	3	291	junction_1	96.7479198742795	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTACTTGATTATGATTC	27438657	True	NA	15	True	AATAAA	-15	NA	27442345	27444291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_27442441_27442578_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948
transcript_78594.known	chr2	+	724	5	FSM	ENSG00000157992.12	ENST00000464699.5	724	5	0	0	0	0	multi-exon	FALSE	canonical	3	227	junction_4	132.380842647265	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27442734	False	NA	21	True	AATAAA	-21	NA	27442744	27444297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444185
transcript_78595.known	chr2	+	942	6	FSM	ENSG00000157992.12	ENST00000407293.5	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	164	junction_5	142.700525577168	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGATTATGATTCCTTTTG	27438757	True	NA	21	True	AATAAA	-21	NA	27442445	27444297	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27442764_27442841_27442902_27443073_27443281_27443397_27443533_27443948_27444062_27444188
transcript_78596.known	chr2	-	1612	7	FSM	ENSG00000115226.10	ENST00000264703.4	1612	7	0	0	0	0	multi-exon	TRUE	canonical	3	153	junction_5	4.52462398683274	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGACTGTATAGTATGCTG	-27494478	True	NA	-4	True	AATAAA	-20	NA	27495200	27491882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27492479_27492665_27492791_27493388_27493479_27493929_27494135_27494350_27494467_27494546_27494704_27494877
transcript_78597.known	chr2	+	3531	14	FSM	ENSG00000243943.10	ENST00000355467.6	3531	14	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	46.2761200830496	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTTTGGTTCATGAATTAT	27578525	True	NA	9	True	AATAAA	-25	NA	27583041	27623217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27583657_27583717_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_78598.known	chr2	+	3417	14	FSM	ENSG00000243943.10	ENST00000379717.5	3417	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	59.4058351884549	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTTCCAGTGTTCTTTG	27578513	True	NA	13	True	AATAAA	-14	NA	27583029	27623094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27583657_27583717_27598069_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_786.nnic	chr1	+	1559	6	NNC	ENSG00000228794.11	novel	1823	7	NA	NA	-51	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	23.3529441398724	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGAGGTACAATAGCTATT	827534	False	NA	11	True	AATAAA	-14	NA	827546	854387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390_853488_853536
transcript_78601.known	chr2	+	2445	14	FSM	ENSG00000198522.14	ENST00000610189.2	2445	14	0	0	0	0	multi-exon	FALSE	canonical	3	650	junction_11	63.1183728725863	1639	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTTTAATGTTCTATAC	27619311	True	NA	10	True	AATAAA	-20	NA	27629049	27651511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27629170_27629858_27629953_27631026_27631067_27631833_27631901_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_78603.known	chr2	+	2544	14	FSM	ENSG00000163798.13	ENST00000618046.4	2544	14	0	0	0	0	multi-exon	FALSE	canonical	2	165	junction_6	37.661211662735	206	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAATATTTTATTTTATT	27661200	True	NA	12	True	ATTAAA	-19	NA	27663888	27694972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27664578_27665099_27665296_27667267_27667391_27668842_27668904_27669247_27669388_27675531_27675693_27677294_27677365_27677737_27677925_27682247_27682360_27685036_27685278_27687933_27688021_27688699_27688768_27693684_27693755_27694633
transcript_78607.known	chr2	+	3543	13	FSM	ENSG00000243943.10	ENST00000556601.5	3543	13	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	40.271991921599	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCTTTGGTTCATGAATT	27578452	True	NA	7	True	AATAAA	-23	NA	27582968	27623215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690_27600816_27601355_27601443_27602462_27602562_27603139_27603308_27607844_27608040_27615167_27615270_27616261_27616325_27617472_27617572_27621152
transcript_78619.nic	chr2	+	1697	12	NIC	ENSG00000198522.14	novel	1832	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	66	junction_2	209.5145905095	431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTTTGTTCTAAGACTGCT	27619285	True	NA	26	True	GATAAA	-15	NA	27629023	27650844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_27629170_27629858_27629953_27632632_27632671_27634845_27634925_27635139_27635235_27638209_27638256_27638884_27639032_27640042_27640126_27641239_27641280_27642428_27642520_27647835_27647944_27650114
transcript_78633.known	chr2	-	560	2	FSM	ENSG00000176714.10	ENST00000522876.1	560	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAAGCCAGAGAAGCTAAC	-27628703	False	NA	NA	False	AATAAA	-8	NA	27628891	27627859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27627918_27628389
transcript_78634.known	chr2	-	2343	2	FSM	ENSG00000176714.10	ENST00000324364.4	2343	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACTGTTCCAATGTAACAC	-27628824	True	NA	1	True	AATAAA	-22	NA	27629012	27625637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27627918_27628949
transcript_78635.known	chr2	-	1472	2	FSM	ENSG00000176714.10	ENST00000394775.3	1472	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGTACTCTTAAGTGCTA	-27628690	False	NA	NA	False	ATTAAA	-12	NA	27628878	27626928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27627918_27628395
transcript_78637.known	chr2	-	2869	5	FSM	ENSG00000119760.16	ENST00000406540.5	2869	5	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_4	24.3567239176372	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTAACTTGATTCATTTTT	-27660776	True	NA	-4	True	AATATA	-25	NA	27663640	27653051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27662282_27663328
transcript_78638.known	chr2	-	2280	6	FSM	ENSG00000119760.16	ENST00000405491.5	2280	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	65.9047797963092	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTTTTCATTTAACTT	-27660775	True	NA	-15	True	AATATA	-14	NA	27663639	27653062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27653748_27655364_27655603_27657344_27657670_27660983_27661602_27662178_27662282_27663328
transcript_78639.known	chr2	+	505	5	FSM	ENSG00000243943.10	ENST00000494548.1	505	5	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	55.4724030487232	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGCAGTGTCTCCTGCCC	27578527	True	NA	NA	False	NA	NA	NA	27583043	27600728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27583143_27598066_27598255_27599582_27599679_27599969_27600054_27600690
transcript_78641.known	chr2	-	2860	2	FSM	ENSG00000205334.3	ENST00000379677.2	2860	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTGCCCATTATTC	-27715706	True	NA	NA	False	AATAAA	-18	NA	27715732	27705785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27708497_27715583
transcript_78660.known	chr2	+	587	4	FSM	ENSG00000243147.8	ENST00000476552.1	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	438.317236713319	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATTTTTATAGCCCTTAAT	27772028	False	NA	-25	True	NA	NA	NA	27772189	27779697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27772386_27772673_27772693_27774423_27774531_27779432
transcript_78673.known	chr2	+	729	3	FSM	ENSG00000243147.8	ENST00000483992.5	729	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	636.5	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCCTGTGCTATTGTGTCT	27771813	True	NA	9	True	AATAAA	-12	NA	27771974	27779731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27772386_27772673_27772693_27779432
transcript_78677.nnic	chr2	+	780	2	Fusion	ENSG00000289326.1_ENSG00000243147.8	novel	652	3	NA	NA	-362	0	multi-exon	FALSE	canonical	3	22	junction_1	0	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	NA	False	NA	11	True	AATAAA	-14	NA	27752468	27779733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_27752948_27779432
transcript_78678.known	chr2	+	404	3	FSM	ENSG00000243147.8	ENST00000379666.7	404	3	0	0	0	0	multi-exon	FALSE	canonical	3	1303	junction_2	408	6251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCTATTGTGTCTTAG	27762455	True	NA	12	True	AATAAA	-15	NA	27771716	27779734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27771800_27772673_27772693_27779432
transcript_78679.known	chr2	+	508	4	FSM	ENSG00000243147.8	ENST00000296102.8	508	4	0	0	0	0	multi-exon	FALSE	canonical	3	930	junction_3	547.559636528804	7377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGTGCTATTGTGTCTTA	27762457	True	NA	11	True	AATAAA	-14	NA	27771718	27779733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27771800_27772673_27772693_27774423_27774531_27779432
transcript_78682.known	chr2	-	1247	8	FSM	ENSG00000171174.15	ENST00000302188.8	1247	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	3.614031611621	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAAGTAACCTCAATTGTC	-27890139	True	NA	NA	False	ATTAAA	-33	NA	27890387	27781378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_27781789_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_78686.nic	chr2	-	1241	8	NIC	ENSG00000171174.15	novel	735	4	NA	NA	-45	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	9.09810475890895	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTAGCGAGTCTTTTGT	-27890184	True	NA	NA	False	AATAAA	-37	NA	27890432	27809686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_27810046_27827566_27827756_27832685_27832778_27843066_27843232_27847041_27847105_27848033_27848098_27858438_27858572_27890256
transcript_78690.nic	chr2	-	1407	2	ISM	ENSG00000171174.15	ENST00000449378.1	2151	9	-22	88043	-1	-11115	5prime_fragment	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTGGATCATCCCAAA	-27890140	True	NA	NA	False	AATAAA	-18	NA	27890388	27869615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_27870891_27890256
transcript_78692.known	chr2	+	1752	14	FSM	ENSG00000158019.21	ENST00000379632.6	1752	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	87.4133890872329	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888288	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_78693.known	chr2	+	1686	13	FSM	ENSG00000158019.21	ENST00000361704.6	1686	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	71.4288204360739	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888288	True	NA	21	True	ATTAAA	-27	NA	27890792	28338901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28310081_28310154_28338449
transcript_78695.known	chr2	+	1852	13	FSM	ENSG00000158019.21	ENST00000344773.6	1852	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_12	70.515955641259	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888224	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28327273_28327448_28338449
transcript_78696.known	chr2	+	1681	13	FSM	ENSG00000158019.21	ENST00000342045.6	1681	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	69.6987067471285	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888287	True	NA	21	True	ATTAAA	-27	NA	27890791	28338901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27892382_27892449_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_78699.known	chr2	+	1678	12	FSM	ENSG00000158019.21	ENST00000379624.6	1678	12	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_11	15.7967461865615	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTAGTGTCTTCCCTCTGTGC	27888224	True	NA	21	True	ATTAAA	-27	NA	27890728	28338901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225_28025421_28045724_28045800_28129270_28129381_28237201_28237302_28241322_28241394_28244779_28244863_28298337_28298492_28338449
transcript_7870.known	chr1	+	885	9	FSM	ENSG00000143033.18	ENST00000494963.5	885	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	263.866413882101	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGTTTATATGCTCTGTCT	93066793	True	NA	NA	False	TATAAA	-34	NA	93079295	93119338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93110229_93110247_93110326_93110429_93110544_93110627_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_78716.nic	chr2	+	723	5	ISM	ENSG00000158019.21	ENST00000344773.6	1852	13	-22	313413	-22	0	5prime_fragment	FALSE	canonical	3	197	junction_1	7.15454401062709	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTAAATCCTAGTCATTT	27888202	True	NA	8	True	AATAAA	-21	NA	27890706	28025488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_27890843_27894532_27894685_27929831_27929909_27987992_27988088_28025225
transcript_78717.known	chr2	+	4771	9	FSM	ENSG00000213639.10	ENST00000358506.6	4771	9	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	99.070366406913	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAATGACCATAAATCT	28732699	True	NA	11	True	ATTAAA	-11	NA	28751747	28802930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_78722.known	chr2	+	4916	8	FSM	ENSG00000213639.10	ENST00000395366.3	4916	8	0	0	0	0	multi-exon	FALSE	canonical	3	350	junction_2	65.616697725565	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATAAATCTTTGCTTCTTT	28732781	True	NA	21	True	ATTAAA	-21	NA	28751829	28802940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_78748.nnic	chr2	-	1550	5	NIC	ENSG00000171103.11	novel	1844	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_4	109.857862713599	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867358	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28869578
transcript_78752.nnic	chr2	+	2331	4	NNC	ENSG00000213639.10	novel	4916	8	NA	NA	-18	-611	intron_retention	FALSE	canonical	0	0	junction_1	231.984194863932	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGAAGCCTGACTGATTTT	28732747	True	NA	21	True	AGTAAA	-15	NA	28751795	28801037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_28752177_28781803_28781843_28783906_28783979_28799198
transcript_78764.known	chr2	+	3527	9	FSM	ENSG00000213639.10	ENST00000296122.10	3527	9	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	144.976722269473	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAATGATTCTGTAATTCC	28732765	True	NA	20	True	AATAAA	-21	NA	28751813	28801648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28751925_28752037_28752177_28776850_28776983_28778808_28779040_28781737_28781843_28783906_28783979_28788657_28788810_28793862_28793998_28799198
transcript_78765.known	chr2	-	1844	7	FSM	ENSG00000171103.11	ENST00000306108.10	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_5	32.3715409992584	775	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28867358	True	NA	NA	False	AATAAA	-20	NA	28870309	28849820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_28850243_28850327_28850406_28851071_28851299_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_78766.known	chr2	-	685	3	FSM	ENSG00000171103.11	ENST00000419999.5	685	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_2	133	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATGTATCTGTCCATTT	-28851271	False	NA	NA	False	AATAAA	-20	NA	28851283	28849820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_28850243_28850327_28850406_28851098
transcript_78767.known	chr2	-	1584	6	FSM	ENSG00000171103.11	ENST00000439947.1	1584	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	104.346729704385	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATGCATTTTAAGATAAAT	-28867344	True	NA	NA	False	AATAAA	-1	NA	28870295	28849839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_28850243_28850327_28850406_28852407_28852500_28861117_28861309_28865016_28865120_28869578
transcript_78768.known	chr2	+	584	4	FSM	ENSG00000213639.10	ENST00000441461.5	584	4	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_1	97.2431088675296	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAGTGAAAATAAAGACTT	28751689	False	NA	NA	False	NA	NA	NA	28751738	28779039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28751821_28752037_28752177_28776850_28776983_28778808
transcript_78772.known	chr2	+	3506	18	FSM	ENSG00000163811.12	ENST00000407426.8	3506	18	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_7	73.0430029285257	318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTGTCTTGTGGTATAT	28884369	True	NA	17	True	AATAAA	-17	NA	28894666	28948219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578_28929711_28935520_28935608_28936921_28936954_28937930_28937995_28941460_28941575_28942311_28942382_28946449_28946500_28946599
transcript_78783.nic	chr2	+	1415	11	ISM	ENSG00000163811.12	ENST00000407426.8	3506	18	-27	18590	-27	3144	5prime_fragment	FALSE	canonical	3	576	junction_7	65.3020673485917	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGGAAGACCTCCAGAC	28884342	True	NA	NA	False	NA	NA	NA	28894639	28929629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_28894924_28901986_28902125_28906459_28906582_28912589_28912711_28914068_28914209_28917892_28917996_28922918_28922984_28924981_28925154_28926467_28926555_28927568_28927701_28929578
transcript_78792.known	chr2	+	2560	5	FSM	ENSG00000119801.13	ENST00000379520.7	2560	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	68.9021044671351	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144774	True	NA	9	True	AATAAA	-18	NA	30146940	30160533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30148244_30148542_30155849_30155911_30156627_30156793_30158618
transcript_78794.known	chr2	+	2197	4	FSM	ENSG00000119801.13	ENST00000402003.7	2197	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	78.1636459970718	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30148244_30148306_30156627_30156793_30158618
transcript_78798.known	chr2	+	2499	4	FSM	ENSG00000119801.13	ENST00000379519.7	2499	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	64.9632374672185	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144774	True	NA	9	True	AATAAA	-18	NA	30146940	30160533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30148244_30148542_30156627_30156793_30158618
transcript_78803.known	chr2	+	653	3	FSM	ENSG00000119801.13	ENST00000470120.5	653	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	93	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTAAGATGGAACCTTTCT	30147876	True	NA	NA	False	AATGAA	-24	NA	30147951	30158966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30148092_30156627_30156793_30158618
transcript_78805.known	chr2	+	2136	3	FSM	ENSG00000119801.13	ENST00000261353.9	2136	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	17.5	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGCAGTACTGCTGCTT	30144840	True	NA	9	True	AATAAA	-18	NA	30147006	30160533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30147063_30156627_30156793_30158618
transcript_78806.known	chr2	+	559	3	FSM	ENSG00000213626.13	ENST00000406087.5	559	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	120.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTGTTCCTGAACTGTGT	30225050	True	NA	NA	False	AATAAA	-45	NA	30231536	30257656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30231765_30234404_30234512_30257432
transcript_7881.known	chr1	+	760	6	FSM	ENSG00000143033.18	ENST00000473430.5	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	244.488854551695	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGTGGACCTTTCTGT	93066780	True	NA	NA	False	NA	NA	NA	93079282	93119401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93079532_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332
transcript_78810.known	chr2	+	485	3	FSM	ENSG00000213626.13	ENST00000401506.1	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	123.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCGAGTTGGTTTTCTTTTC	30232069	True	NA	NA	False	NA	NA	NA	30232152	30257760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30232207_30234404_30234508_30257432
transcript_78811.known	chr2	+	756	3	FSM	ENSG00000213626.13	ENST00000407930.2	756	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	118.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGTTTTTCCCATCATGA	30232096	True	NA	NA	False	NA	NA	NA	30232179	30257670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30232595_30234404_30234508_30257432
transcript_78812.nic	chr2	+	1535	2	ISM	ENSG00000213626.13	ENST00000464412.5	494	3	-6	20996	-3	-20996	5prime_fragment	FALSE	canonical	3	241	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAATAGAAAGCCAGGGAG	30225044	True	NA	NA	False	ATTAAA	-13	NA	30231530	30235705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_30231765_30234404
transcript_78813.known	chr2	+	4879	6	FSM	ENSG00000172954.14	ENST00000379509.8	4879	6	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_4	14.2070405081424	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTGTGTTACGTTCTGTT	30444780	True	NA	13	True	AATAAA	-21	NA	30447245	30644225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30562145_30562293_30568059_30568177_30640116
transcript_78818.known	chr2	+	583	4	FSM	ENSG00000172954.14	ENST00000466477.5	583	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	67.1830004953303	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATGTCATAAAATTACCT	30444760	True	NA	NA	False	NA	NA	NA	30447225	30552549	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_30447384_30525586_30525756_30533115_30533315_30552492
transcript_78824.known	chr2	-	2447	15	FSM	ENSG00000158089.15	ENST00000349752.10	2447	15	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	7.06276525599035	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATCTCTTGCTCTTTTCTTC	-31138088	True	NA	-1	True	AATAAA	-26	NA	31138440	30910466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_30911060_30912222_30912343_30924118_30924264_30924739_30924824_30929394_30929488_30932067_30932195_30942200_30942305_30944857_30944943_30945782_30945871_30955617_30955740_30955911_30955978_30958396_30958465_30966203_30966303_30992837_30993008_31137957
transcript_78829.known	chr2	-	1516	10	FSM	ENSG00000162959.14	ENST00000404530.6	1516	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_9	72.5580227588009	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010995	False	NA	NA	False	AATAAA	-19	NA	32011008	31867822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186_32010265_32010941
transcript_78837.known	chr2	-	4505	9	FSM	ENSG00000162959.14	ENST00000295065.9	4505	9	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_4	33.0529877620768	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGTTGCTTCTTTATTAT	-32010544	False	NA	NA	False	TATAAA	-22	NA	32010557	31865059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_78850.known	chr2	-	1336	8	FSM	ENSG00000162959.14	ENST00000426310.6	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_6	81.4220548770919	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACAAAAAGGTGGAAGCTT	-32010362	False	NA	NA	False	NA	NA	NA	32010375	31867977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_31868493_31869847_31869953_31883385_31883463_31891991_31892135_31917925_31918038_31920797_31920911_31943301_31943384_32010186
transcript_78851.nnic	chr2	-	1582	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	17	0	combination_of_known_splicesites	FALSE	canonical	3	32	junction_3	80.100701925636	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010527	False	NA	NA	False	AATAAA	-19	NA	32010540	31867822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_31868493_31869847_31869953_31883385_31883463_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_78854.nic	chr2	-	1514	8	NIC	ENSG00000162959.14	novel	1516	10	NA	NA	11	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_2	84.4731571904015	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTCTGATTTAAACTTATT	-32010393	False	NA	NA	False	AATAAA	-19	NA	32010406	31867822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_31868493_31869847_31869953_31891991_31892135_31917925_31918038_31920797_31920911_31932066_31932136_31943301_31943384_32010186
transcript_78886.known	chr2	-	631	5	FSM	ENSG00000162961.14	ENST00000295066.3	631	5	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_4	692.873184644925	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTGGATGTATAAGA	-32019686	True	NA	-148	True	NA	NA	NA	32039805	32024101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039592
transcript_78902.known	chr2	-	688	5	FSM	ENSG00000162961.14	ENST00000342166.10	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	1364	junction_4	171.680480835767	19995	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTAAAGTAGTTTTTG	-32019686	True	NA	-31	True	AATAAA	-15	NA	32039805	32023904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32024257_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_78903.known	chr2	-	637	7	FSM	ENSG00000162961.14	ENST00000452582.5	637	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	802.208548667711	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACAGGGTCTCCTATGTTC	-32019635	True	NA	-23	True	AATAAA	-11	NA	32039754	32011885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32012053_32023421_32023475_32023676_32023809_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_78904.known	chr2	-	523	6	FSM	ENSG00000162961.14	ENST00000414013.5	523	6	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_2	776.395260160699	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TAAAAAATAAAAAATTCATA	-32019674	True	NA	-44	True	NA	NA	NA	32039793	32011906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32012053_32023421_32023475_32029593_32029737_32039278_32039327_32039420_32039493_32039732
transcript_78905.known	chr2	-	712	1	FSM	ENSG00000272716.1	ENST00000608489.1	712	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	152	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATATGTAGCACGTGTG	-32165550	True	NA	NA	False	ATTAAA	-16	NA	32165757	32165045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_32165000_32165800
transcript_78906.known	chr2	+	2354	15	FSM	ENSG00000152683.14	ENST00000379343.6	2354	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	36.0609602914683	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGTCTGTTCAAAAAGTAAAA	32163248	True	NA	NA	False	TATAAA	-41	NA	32165863	32221524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32177476_32177597_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_78907.known	chr2	+	5089	14	FSM	ENSG00000152683.14	ENST00000282587.9	5089	14	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	10.9160323979736	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTCTTTGGCATCCTTTTG	32163248	True	NA	5	True	ATTAAA	-19	NA	32165863	32224379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32209492_32209562_32220212
transcript_78917.known	chr2	+	4776	13	FSM	ENSG00000152683.14	ENST00000435660.5	4776	13	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_12	27.9149253188246	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATCTTTCTTTATTCAG	32163225	True	NA	38	True	ATTAAA	-32	NA	32165840	32224112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32165904_32171286_32171374_32174062_32174148_32175318_32175362_32184272_32184339_32192335_32192417_32192917_32192954_32193888_32193984_32197343_32197393_32197706_32197827_32204589_32204693_32206885_32206934_32220212
transcript_78924.known	chr2	+	2888	20	FSM	ENSG00000018699.13	ENST00000317907.9	2888	20	0	0	0	0	multi-exon	FALSE	canonical	2	104	junction_17	20.9030210277998	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	32623564	True	NA	5	True	AATAAA	-18	NA	32628049	32821051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32777881_32777981_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_78928.nnic	chr2	+	2808	19	NIC	ENSG00000018699.13	novel	2888	20	NA	NA	-1	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_13	37.5310570982697	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTCTTGGTTTTGTGATGT	NA	False	NA	5	True	AATAAA	-18	NA	32628030	32821051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_32628381_32630522_32630701_32633875_32634006_32640269_32640411_32650130_32650234_32664302_32664468_32666634_32666769_32672271_32672385_32678855_32678923_32702806_32702921_32733827_32733924_32736693_32736817_32758291_32758520_32782625_32782679_32786983_32787150_32811023_32811222_32812503_32812616_32817456_32817558_32820815
transcript_7893.known	chr1	+	1870	14	FSM	ENSG00000143033.18	ENST00000467953.5	1870	14	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_2	131.114476382891	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GTCAAAAAAATTCAAAAAAG	93110230	True	NA	-70	True	NA	NA	NA	93110245	93137132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93110429_93110544_93110631_93114687_93114784_93114987_93115089_93115469_93115619_93118344_93118441_93119332_93119402_93120548_93120673_93127231_93127300_93129277_93129449_93133702_93133809_93133927_93133981_93134090_93134196_93136669
transcript_78936.known	chr2	-	338	2	ISM	ENSG00000119812.20	ENST00000685835.1	2907	5	5926	-18	3657	18	3prime_fragment	FALSE	canonical	3	10	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTTAGTTATTCATGTCTT	NA	False	NA	NA	False	AATACA	-13	NA	33563547	33555046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_33555315_33563477
transcript_78942.known	chr2	-	2751	8	FSM	ENSG00000119812.20	ENST00000238823.13	2751	8	0	0	0	0	multi-exon	FALSE	canonical	3	684	junction_3	63.3165033134074	1331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGGTTTGAGTTTTATT	-33589413	True	NA	-17	True	AATAAA	-18	NA	33599299	33583659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_33585445_33585529_33585698_33586561_33586679_33587239_33587321_33588334_33588520_33592079_33592215_33595488_33595638_33599168
transcript_78945.nnic	chr2	+	614	2	NNC	ENSG00000286415.1	novel	1812	2	NA	NA	-101	-1205	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	22	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGGCTTTTCTCTCTCT	33598858	True	NA	NA	False	AGTAAA	-19	NA	33599340	33656237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_33599477_33655759
transcript_78946.nnic	chr2	-	584	2	Genic_Genomic	ENSG00000260025.1	novel	366	1	NA	NA	-324	0	multi-exon	FALSE	canonical	3	38	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTCTTTGTGATAAATC	NA	False	NA	-4	True	AATAAA	-15	NA	36355438	36354748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_36354982_36355087
transcript_78947.known	chr2	-	366	1	FSM	ENSG00000260025.1	ENST00000565283.1	366	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATAGTCTTTGTGATAAATC	NA	False	NA	-4	True	AATAAA	-15	NA	36355114	36354748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36354700_36355100
transcript_78948.nic	chr2	+	580	3	NIC	ENSG00000150938.10	novel	311	3	NA	NA	-142	6	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	0.5	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACACTGTGGTTCTTGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	36356300	36379230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_36356624_36378356_36378526_36379142
transcript_78949.known	chr2	-	2097	9	FSM	ENSG00000171055.15	ENST00000379245.8	2097	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	15.3617829368859	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-36595468	True	NA	-20	True	AATAAA	-19	NA	36598191	36552257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36560784_36560866_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_78951.known	chr2	-	1993	8	FSM	ENSG00000171055.15	ENST00000405912.8	1993	8	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_6	9.14508901330241	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTTTGAGAGCCTTAT	-36595445	True	NA	-20	True	AATAAA	-19	NA	36598168	36552257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36553180_36555682_36555749_36558437_36558514_36578596_36578866_36581289_36581432_36583352_36583470_36590902_36591012_36597876
transcript_78958.known	chr2	-	6937	36	FSM	ENSG00000008869.12	ENST00000233099.6	6937	36	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_21	10.3487749447528	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAAAATGTTTAAATGTAAT	-37082851	True	NA	NA	False	ATTAAA	-20	NA	37084372	36980894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_36981795_36988645_36988860_36990647_36990800_37000585_37000814_37002305_37002573_37003541_37003687_37005631_37005760_37007049_37007305_37008610_37008849_37013840_37014021_37019808_37019878_37020654_37020837_37027922_37028175_37028680_37028921_37032628_37032774_37037854_37038025_37040328_37040519_37041132_37041293_37049652_37049844_37053501_37053608_37056439_37056616_37057316_37057481_37058450_37058561_37058887_37058988_37060580_37060734_37061938_37062051_37064739_37064991_37065754_37065911_37068680_37068931_37070229_37070388_37072109_37072282_37075484_37075635_37076910_37077020_37079119_37079332_37083288_37083437_37084268
transcript_78962.nnic	chr2	-	565	3	NNC	ENSG00000008869.12	novel	6937	36	NA	NA	0	-9859	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	21	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAAAAAAAAAAGT	-37082851	True	NA	NA	False	NA	NA	NA	37084372	37082070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_37082384_37083288_37083437_37084268
transcript_78968.known	chr2	-	10103	17	FSM	ENSG00000055332.19	ENST00000681507.1	10103	17	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_16	28.9697444543441	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37157094	False	NA	0	True	AATAAA	-20	NA	37157192	37099209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37148940_37156907
transcript_78971.known	chr2	-	9975	17	FSM	ENSG00000055332.19	ENST00000233057.9	9975	17	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_16	22.8336374675609	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGGTATGTTAAAGTATTT	-37151082	True	NA	0	True	AATAAA	-20	NA	37156980	37099209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37107396_37107473_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_78976.nic	chr2	-	1804	16	ISM	ENSG00000055332.19	ENST00000233057.9	9975	17	-18	8267	9	-131	5prime_fragment	FALSE	canonical	3	74	junction_15	23.5790867790365	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGTAAGCACTTGAAAATC	-37151100	True	NA	NA	False	GATAAA	-4	NA	37156998	37107476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_37107528_37109193_37109296_37114730_37114860_37119958_37120140_37122505_37122665_37126288_37126412_37135483_37135547_37136982_37137018_37138269_37138364_37138508_37138586_37139630_37139758_37141552_37141702_37146852_37146974_37147687_37147823_37148856_37149024_37156907
transcript_78977.known	chr2	+	3839	9	FSM	ENSG00000152133.16	ENST00000674370.2	3839	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	6.60965203320114	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	37083775	True	NA	47	True	AATAAA	-19	NA	37084517	37099244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37084571_37088368_37088441_37089639_37089867_37090680_37090723_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_78981.known	chr2	+	3570	7	FSM	ENSG00000152133.16	ENST00000281932.6	3570	7	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	12.0646407139026	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTAAACATTTAATTGT	37083775	True	NA	47	True	AATAAA	-19	NA	37084517	37099244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37084571_37088368_37088441_37091915_37092037_37092164_37092256_37094081_37094196_37095436_37095519_37096207
transcript_79.known	ERCC-00163	+	527	1	FSM	ERCC-00163A	DQ668359	527	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	168	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00163_+_0_500
transcript_79006.known	chr2	+	687	6	FSM	ENSG00000218739.10	ENST00000406711.5	687	6	0	0	0	0	multi-exon	TRUE	canonical	3	13	junction_5	364.1298669431	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACTTTTCCTGAAACAATT	37181648	True	NA	NA	False	AATATA	-2	NA	37196504	37203495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37196521_37198493_37198673_37199703_37199820_37201047_37201093_37201641_37201727_37203249
transcript_79040.known	chr2	+	695	5	FSM	ENSG00000218739.10	ENST00000392061.6	695	5	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_4	272.672422514636	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTCCTTGCCTCTTTTTGTT	37181651	True	NA	25	True	AATAAA	-29	NA	37196507	37204739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37204303
transcript_79041.known	chr2	+	3152	5	FSM	ENSG00000218739.10	ENST00000402297.6	3152	5	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_1	92.2306890357	716	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCCTCTTTTTGTTTCAG	37181639	True	NA	29	True	AATAAA	-33	NA	37196495	37204743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37196521_37199703_37199820_37201047_37201093_37201641_37201727_37201862
transcript_79042.known	chr2	-	3346	16	FSM	ENSG00000115816.15	ENST00000234170.10	3346	16	0	0	0	0	multi-exon	FALSE	canonical	3	984	junction_13	50.4630117566872	1262	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCATGTGGAAGCATTGTTA	-37210859	True	NA	-10	True	AATAAA	-31	NA	37231596	37201611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37201904_37202783_37202866_37202949_37203009_37210998_37211083_37211842_37212040_37212334_37212393_37213863_37213962_37214885_37214953_37216139_37216209_37216315_37216419_37216983_37217038_37220384_37220474_37222379_37222564_37223169_37223402_37227543_37229037_37231411
transcript_79043.known	chr2	+	367	3	FSM	ENSG00000218739.10	ENST00000438935.2	367	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTATCTGTGTTTTCTGAA	37213440	False	NA	NA	False	AATAAA	-27	NA	37213466	37216193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37213555_37215320_37215519_37216112
transcript_79044.known	chr2	+	800	3	FSM	ENSG00000218739.10	ENST00000470216.1	800	3	0	0	0	0	multi-exon	FALSE	canonical	3	579	junction_1	98.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTTGAACAGCAAAAATTAG	37181637	True	NA	NA	False	AAAACA	-2	NA	37196493	37201704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37196521_37199703_37199820_37201047
transcript_79045.known	chr2	-	6156	19	FSM	ENSG00000115825.11	ENST00000234179.8	6156	19	0	0	0	0	multi-exon	FALSE	canonical	3	208	junction_17	51.7375857358824	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGTTGATTATCTGGAG	-37320477	False	NA	-15	True	AATAAA	-31	NA	37324833	37250501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37253351_37254203_37254290_37256661_37256930_37259582_37259682_37260222_37260385_37267429_37267537_37269614_37269688_37272379_37272433_37274420_37274698_37275766_37275845_37277865_37277990_37279745_37279930_37282541_37282620_37286176_37286370_37289355_37289514_37290867_37291000_37293132_37293272_37316236_37317180_37324680
transcript_7905.known	chr1	+	4552	28	FSM	ENSG00000122483.18	ENST00000401026.7	4552	28	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_1	20.5455097240656	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGCCCTTCTAAAAC	93180301	False	NA	NA	False	AATAAA	-21	NA	93180362	93278607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93180883_93183359_93183496_93183977_93184147_93186344_93186504_93191999_93192107_93193615_93193745_93201891_93201989_93205509_93205632_93207106_93207399_93210801_93210927_93212100_93212262_93214742_93214967_93216635_93216747_93217737_93217870_93221608_93221744_93221858_93221937_93226332_93226450_93232425_93232594_93236247_93236391_93239309_93239474_93239682_93239897_93246104_93246205_93246837_93246955_93254470_93254615_93256334_93256539_93258747_93258886_93264700_93264902_93278462
transcript_79072.known	chr2	-	539	2	FSM	ENSG00000115825.11	ENST00000477132.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGATAGCTCAGTGAT	-37320014	False	NA	NA	False	AATAGA	-31	NA	37324370	37316813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37317180_37324197
transcript_79074.known	chr2	+	2184	10	FSM	ENSG00000003509.16	ENST00000002125.9	2184	10	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_5	53.6009489505089	335	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACTAGTGTACACTGGTT	37228271	True	NA	13	True	AATAAA	-25	NA	37231657	37249160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37231761_37232105_37232267_37236095_37236177_37237756_37237868_37241577_37241792_37242634_37242694_37243862_37243974_37246051_37246196_37247455_37247630_37248134
transcript_79076.known	chr2	+	992	6	FSM	ENSG00000115828.17	ENST00000404976.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	116.969397707264	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAATGAAGAAAATTTGGATG	37344577	False	NA	NA	False	NA	NA	NA	37344593	37372742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37344852_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_79077.known	chr2	+	1683	7	FSM	ENSG00000115828.17	ENST00000338415.8	1683	7	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_5	19.2995394303134	621	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTGATGTCTTTTTTAT	37342902	True	NA	NA	False	ATTAAA	-18	NA	37344629	37373322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37344852_37352788_37352936_37359579_37359859_37367231_37367409_37369684_37369785_37372355_37372473_37372681
transcript_79078.known	chr2	-	997	2	FSM	ENSG00000163171.8	ENST00000457889.1	997	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTAAGTCAGAGGAGT	-37672014	True	NA	NA	False	NA	NA	NA	37672199	37645940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37646823_37672084
transcript_79079.known	chr2	-	5096	2	FSM	ENSG00000163171.8	ENST00000295324.4	5096	2	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTGCATTTAATTATCT	-37667752	True	NA	-12	True	AATGAA	-18	NA	37671642	37641943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_37646823_37671425
transcript_79083.known	chr2	+	1893	11	FSM	ENSG00000115841.21	ENST00000354545.8	1893	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	5.10783711564885	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGCTTTCACTCGTGTCCA	37925027	True	NA	4	True	AATAAA	-31	NA	37925286	38017744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_37925426_37929261_37929730_37974039_37974215_37975211_37975315_37981282_37981344_37989540_37989617_37991219_37991298_37997415_37997515_38003990_38004045_38004135_38004217_38017185
transcript_79086.known	chr2	-	2864	13	FSM	ENSG00000119787.14	ENST00000406122.5	2864	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	141.686934824634	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAAAATCTGGTCCTGTGGT	-38372899	True	NA	-112	True	ATTAAA	-17	NA	38377285	38295153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296591_38296685_38296701_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
transcript_79088.known	chr2	-	3805	13	FSM	ENSG00000119787.14	ENST00000378954.9	3805	13	0	0	0	0	multi-exon	TRUE	canonical	3	269	junction_1	32.5059823553894	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATCTAGACCATTGGCT	-38372887	True	NA	NA	False	ATTAAA	-24	NA	38377273	38293953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_7909.known	chr1	-	773	8	FSM	ENSG00000223745.8	ENST00000668257.1	773	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	10.3490115864428	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGACAACAGTCTAATGCT	-93344920	True	NA	-9	True	AATAAA	-20	NA	93345799	93264644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93264773_93305387_93305471_93324634_93324730_93325768_93325896_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_79092.known	chr2	-	2335	13	FSM	ENSG00000119787.14	ENST00000419554.6	2335	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	89.0012484306946	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTAGAAGTAGTTTAGTGT	-38372887	True	NA	-4	True	AATAAA	-24	NA	38377273	38295900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296591_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38343267_38343513_38377142
transcript_79095.known	chr2	-	1600	12	FSM	ENSG00000119787.14	ENST00000651368.1	1600	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_11	95.3215523746201	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTGTAGAAGTAGTTTAGT	-38372876	True	NA	-6	True	AATAAA	-22	NA	38377262	38295902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314665_38315283_38315335_38318534_38318640_38318884_38319020_38377142
transcript_79104.nic	chr2	-	2345	9	NIC	ENSG00000119787.14	novel	1905	12	NA	NA	-5	269	combination_of_known_junctions	FALSE	canonical	3	86	junction_8	85.6758972815576	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAACTTGTGATTCTTTTT	-38372904	True	NA	NA	False	ATTAAA	-21	NA	38377290	38294884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_38296114_38298143_38298576_38299255_38299328_38300271_38300329_38309378_38309507_38310308_38310448_38313150_38313244_38314607_38314655_38377142
transcript_79113.nic	chr2	-	1499	2	ISM	ENSG00000119787.14	ENST00000472097.1	561	3	-336	23646	-324	813	5prime_fragment	FALSE	canonical	3	342	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGAGTATGCCATGTTTTT	-38377529	False	NA	NA	False	AATAAA	-19	NA	38377609	38342480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_38343513_38377142
transcript_79114.nic	chr2	-	434	2	ISM	ENSG00000119787.14	ENST00000472097.1	561	3	-17	24392	-5	67	5prime_fragment	FALSE	canonical	3	342	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCAACCATGCCTGTTAA	-38372904	True	NA	NA	False	ATTAAA	-10	NA	38377290	38343226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_38343513_38377142
transcript_79117.known	chr2	+	954	1	FSM	ENSG00000213553.4	ENST00000394878.2	954	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	337	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCACCAAAAAGCAACCAACT	38481116	False	NA	NA	False	NA	NA	NA	38481850	38482804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38481800_38482800
transcript_79125.known	chr2	-	2779	14	FSM	ENSG00000143889.16	ENST00000358367.8	2779	14	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_13	159.06077882667	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATCTGTTTTTTTTTTCTTT	-38602963	False	NA	-1	True	ATTAAA	-18	NA	38603036	38563185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38564238_38568198_38568298_38568385_38568444_38569132_38569335_38569803_38569926_38573209_38573428_38577460_38577533_38581912_38581986_38582071_38582174_38583845_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_79143.known	chr2	-	1687	7	FSM	ENSG00000143889.16	ENST00000410076.5	1687	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	288.079126861585	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACACTTGCTGCATTGTTTA	-38595237	True	NA	NA	False	AATAAA	-16	NA	38602929	38581074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38581986_38582071_38582169_38583840_38583927_38585643_38585882_38591529_38591649_38602437_38602601_38602856
transcript_79144.nic	chr2	-	789	4	ISM	ENSG00000143889.16	ENST00000410076.5	1687	7	-141	4514	-34	-1746	5prime_fragment	FALSE	canonical	3	117	junction_3	250.185264687325	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGACTGATCTGTAGTTT	NA	False	NA	NA	False	ATTAAA	-24	NA	38603070	38585588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_38585882_38591529_38591649_38602437_38602601_38602856
transcript_79145.known	chr2	+	2277	7	FSM	ENSG00000143891.17	ENST00000272252.10	2277	7	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_5	9.2135166407235	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGACTTGTTCCTTTACTC	38664613	True	NA	8	True	AATAAA	-20	NA	38666113	38734765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555_38729698_38731734_38731910_38733487
transcript_79150.nic	chr2	+	1664	6	ISM	ENSG00000143891.17	ENST00000444351.5	834	7	-334	1541	-172	-1541	5prime_fragment	FALSE	canonical	2	2	junction_5	74.2859340656089	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTGTGTGTGTGCGTG	NA	False	NA	7	True	AATAAA	-16	NA	38665908	38730261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38698365_38698437_38729555
transcript_79151.nic	chr2	+	1048	5	ISM	ENSG00000143891.17	ENST00000444351.5	834	7	-334	33276	-172	17178	5prime_fragment	FALSE	canonical	2	3	junction_4	65.6520182477279	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAAAAATGACACCCATA	NA	False	NA	NA	False	NA	NA	NA	38665908	38698526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38698365
transcript_79152.nic	chr2	+	1593	5	ISM	ENSG00000143891.17	ENST00000272252.10	2277	7	-205	4504	-172	-1541	5prime_fragment	FALSE	canonical	3	141	junction_4	10.0591997693654	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTTTTGTGTGTGTGCGTG	NA	False	NA	7	True	AATAAA	-16	NA	38665908	38730261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_38666352_38675911_38676067_38681279_38681487_38689812_38689895_38729555
transcript_79153.known	chr2	-	552	4	FSM	ENSG00000232518.3	ENST00000446277.1	552	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGATTACAGGTGTGAGCC	-38671378	False	NA	NA	False	NA	NA	NA	38671421	38668687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38668762_38668858_38669069_38669338_38669539_38671353
transcript_79209.known	chr2	-	1050	8	FSM	ENSG00000115875.19	ENST00000409276.5	1050	8	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_3	697.517785597249	14987	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGATTTGTGTTCAATA	-38701253	True	NA	30	True	AATAAA	-16	NA	38751358	38744892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_79210.known	chr2	-	2453	7	FSM	ENSG00000115875.19	ENST00000446327.6	2453	7	0	0	0	0	multi-exon	FALSE	canonical	3	368	junction_1	682.791980685837	2487	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGATACTTAATTTTTGG	NA	False	NA	63	True	AATAAA	-23	NA	38751494	38743598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746693_38746748_38748046_38748158_38748578_38748654_38749528_38749706_38750013_38750195_38751228
transcript_79211.known	chr2	-	1944	9	FSM	ENSG00000115875.19	ENST00000425941.6	1944	9	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	940.564026262965	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATAGTGTTAATTAGGAC	-38701258	True	NA	NA	False	NA	NA	NA	38751363	38744452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748055_38748158_38748578_38748654_38748897_38749347_38749528_38749706_38750013_38750195_38751228
transcript_79212.known	chr2	-	1903	7	FSM	ENSG00000115875.19	ENST00000443213.5	1903	7	0	0	0	0	multi-exon	FALSE	canonical	3	1870	junction_1	185.691201251492	291	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTTAAATAAAATGTTTCTAA	-38701247	True	NA	5	True	NA	NA	NA	38751352	38744917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38745188_38746143_38746180_38746693_38746748_38748046_38748158_38748578_38749706_38750013_38750195_38751228
transcript_79215.known	chr2	+	3705	3	FSM	ENSG00000152147.11	ENST00000281950.8	3705	3	0	0	0	0	multi-exon	FALSE	canonical	3	301	junction_2	4.5	1536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTATTTTTTGTCTCCT	38774084	True	NA	18	True	AATAAA	-19	NA	38778209	38785002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38778282_38778971_38779119_38781516
transcript_79216.known	chr2	+	834	4	FSM	ENSG00000152147.11	ENST00000409566.1	834	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	139.557236366382	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATGTTTTAAATGTAAATG	38774084	True	NA	-8	True	AAAAAG	-21	NA	38778209	38781947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38778282_38778971_38779119_38779257_38779442_38781516
transcript_79217.known	chr2	-	4885	24	FSM	ENSG00000163214.21	ENST00000457308.6	4885	24	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_20	17.4168290950962	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGAGTTCTCTTTTGG	-38872732	True	NA	-5	True	ATTAAA	-17	NA	38875934	38797728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38798443_38802714_38802916_38806558_38806694_38813820_38813896_38815520_38815656_38818876_38818961_38819048_38819145_38822992_38823270_38825846_38826048_38826515_38826690_38828339_38828437_38837830_38837948_38843004_38843211_38847018_38847074_38848268_38848403_38854053_38854179_38855056_38855253_38856339_38856462_38858660_38858837_38860998_38861838_38862144_38862334_38863360_38863520_38868181_38868412_38875786
transcript_79224.known	chr2	+	648	5	FSM	ENSG00000188010.16	ENST00000409665.5	648	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	46.8107893545922	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	38874635	True	NA	2	True	AATAAA	-16	NA	38876010	38882647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38876111_38880178_38880230_38880581_38880707_38881441_38881579_38882412
transcript_79226.nnic	chr2	+	769	5	NNC	ENSG00000188010.16	novel	750	5	NA	NA	-18	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	47.3312792981555	449	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTTTGAACTTTATAT	38874582	True	NA	2	True	AATAAA	-16	NA	38875957	38882647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_38876197_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_79230.known	chr2	+	594	4	FSM	ENSG00000214694.12	ENST00000433605.2	594	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCTTTCATTTAACAAT	38960421	True	NA	NA	False	NA	NA	NA	38960504	38973253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38960640_38966005_38966146_38971869_38971945_38973009
transcript_79231.known	chr2	+	456	3	FSM	ENSG00000214694.12	ENST00000430382.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGCACATTTGTCCTGGG	38960477	True	NA	NA	False	NA	NA	NA	38960560	38969641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38960640_38966005_38966146_38969404
transcript_79233.known	chr2	-	1056	1	FSM	ENSG00000269210.2	ENST00000601251.2	1056	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGCTATATAATTAATCT	-38960323	False	NA	-21	True	AATAAA	-30	NA	38960342	38959286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_38959300_38960300
transcript_79234.known	chr2	+	750	5	FSM	ENSG00000188010.16	ENST00000410014.5	750	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	51.2072992843794	587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTTTTTGAACTTTATA	38874615	True	NA	1	True	AATAAA	-15	NA	38875990	38882646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_38876212_38880178_38880230_38880599_38880707_38881441_38881579_38882412
transcript_7924.known	chr1	-	3847	5	FSM	ENSG00000117500.13	ENST00000370290.7	3847	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	120.924563261564	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTAACTGCCAGT	-93180498	False	NA	-17	True	AATAAA	-8	NA	93180516	93151857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93154889_93156299_93156484_93158814_93158886_93160128_93160227_93180053
transcript_79241.known	chr2	-	4335	34	FSM	ENSG00000011566.15	ENST00000263881.8	4335	34	0	0	0	0	multi-exon	TRUE	canonical	3	164	junction_19	36.4604267403714	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCATCTGGTTTAATC	-39428905	True	NA	0	True	AATAAA	-30	NA	39437285	39249265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39250706_39251829_39251886_39254449_39254521_39258347_39258441_39258518_39258588_39260605_39260778_39265202_39265307_39267188_39267248_39272282_39272401_39272481_39272543_39278406_39278487_39280271_39280357_39282512_39282555_39286851_39286965_39288120_39288281_39290291_39290335_39292772_39292827_39293229_39293269_39299742_39299802_39307942_39308006_39309460_39309520_39315309_39315389_39325517_39325629_39325729_39325812_39325898_39325962_39326145_39326278_39331916_39331990_39333531_39333575_39336919_39336968_39337525_39337582_39343387_39343453_39356248_39356340_39378065_39378124_39436891
transcript_79243.known	chr2	+	2536	7	FSM	ENSG00000231312.8	ENST00000449569.6	2536	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	36.8510515453766	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGAAACCCCGTCTCTAC	39435636	True	NA	NA	False	NA	NA	NA	39437432	39601315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39557981_39558047_39599365
transcript_79247.known	chr2	+	3990	6	FSM	ENSG00000231312.8	ENST00000667600.1	3990	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_5	29.9426117765301	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTATTCTTGTACAAGTATT	NA	False	NA	-9	True	AATAAA	-8	NA	39437226	39602628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39518582_39518711_39599365
transcript_7925.known	chr1	-	1296	5	FSM	ENSG00000117500.13	ENST00000479918.5	1296	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	128.804842688464	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTAATGATGGATTGAATAAA	-93176101	True	NA	-40	True	TATAAA	-16	NA	93180361	93154231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93154889_93156035_93156085_93156299_93156484_93160128_93160227_93180053
transcript_79253.known	chr2	+	2349	5	FSM	ENSG00000231312.8	ENST00000658057.1	2349	5	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_4	34.5181111881864	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TCTACTAAAAATACAAAAAA	39435645	True	NA	NA	False	NA	NA	NA	39437441	39601330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39516542_39599365
transcript_79257.known	chr2	+	1086	4	FSM	ENSG00000231312.8	ENST00000445520.7	1091	4	5	0	1	0	multi-exon	FALSE	canonical	3	49	junction_3	22.2311093340441	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACATGGTAGCTCACACCTG	39435628	True	NA	NA	False	TTTAAA	-20	NA	39437424	39475339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39474526
transcript_79262.nic	chr2	+	657	3	ISM	ENSG00000231312.8	ENST00000445520.7	1091	4	-18	20613	0	0	5prime_fragment	FALSE	canonical	3	89	junction_1	6	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCGAGACTCCGTCTCAAAA	39435605	True	NA	NA	False	NA	NA	NA	39437401	39454726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_39437536_39453838_39453932_39454296
transcript_79265.known	chr2	+	3169	6	FSM	ENSG00000231312.8	ENST00000425775.2	3169	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	37.8068776811839	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGAATGGCGTGAACCCGG	39435644	True	NA	NA	False	NA	NA	NA	39437440	39601410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_39437536_39453838_39453932_39454296_39454366_39516413_39517153_39518582_39518711_39599365
transcript_79271.known	chr2	-	2089	11	FSM	ENSG00000138050.15	ENST00000378727.8	2089	11	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_5	74.0541018445299	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTCTTCTCCATTGGAA	-39774928	True	NA	-2	True	ATTAAA	-19	NA	39779267	39736306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39757247_39757369_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_79279.known	chr2	-	2205	10	FSM	ENSG00000138050.15	ENST00000505747.6	2205	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_8	30.9766937479705	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATATGCTCTGGTTTAATGT	-39774919	True	NA	NA	False	AAAAAG	-22	NA	39779258	39736060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769709_39770120_39771504_39771641_39779113
transcript_79280.known	chr2	-	1561	10	FSM	ENSG00000138050.15	ENST00000530522.1	1561	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	92.968333915969	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGGCTGATGGGTACAC	-39774882	True	NA	NA	False	NA	NA	NA	39779221	39736609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_39737060_39744369_39744479_39755294_39755410_39755888_39755961_39761330_39761419_39766056_39766110_39768423_39768502_39769757_39770120_39771514_39771641_39779113
transcript_79303.known	chr2	-	399	1	FSM	ENSG00000236533.1	ENST00000414823.1	399	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	117	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAATAAATCTTTGACTCA	NA	False	NA	NA	False	AAGAAA	-4	NA	41850601	41850202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_41850200_41850600
transcript_79305.known	chr2	+	2490	7	FSM	ENSG00000162878.13	ENST00000294964.6	2490	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_2	6.26276474268531	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTCCCTAATGACAGTTT	42047395	True	NA	31	True	AATAAA	-37	NA	42048020	42058517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42048839_42053238_42053362_42054035_42054308_42054940_42055021_42055285_42055394_42057220_42057395_42057602
transcript_79306.known	chr2	+	787	3	FSM	ENSG00000162878.13	ENST00000480099.1	787	3	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_1	69.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTGTACCTGGGGAGGCT	42054942	False	NA	NA	False	NA	NA	NA	42054956	42058186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42055021_42057255_42057395_42057602
transcript_79307.nnic	chr2	+	773	4	NNC	ENSG00000143924.19	novel	962	4	NA	NA	-9	-4062	at_least_one_novel_splicesite	FALSE	canonical	2	19	junction_3	316.672631522769	131	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTCATTGGTGTGGATTC	42155652	True	NA	NA	False	AATAAA	-19	NA	42169343	42257451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_42169637_42245504_42245688_42256500_42256631_42257284
transcript_79309.known	chr2	+	962	4	FSM	ENSG00000143924.19	ENST00000409040.1	962	4	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	160.968595971043	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTAAGTTATAAACAATCT	42155689	True	NA	NA	False	NA	NA	NA	42169380	42261513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120
transcript_79311.nic	chr2	+	606	3	ISM	ENSG00000143924.19	ENST00000409040.1	962	4	-37	4883	-9	-4883	5prime_fragment	FALSE	canonical	3	646	junction_1	41	293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTACCCATTTATGAAAGGGG	42155652	True	NA	2	True	AAGAAA	-23	NA	42169343	42256630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_42169637_42245504_42245688_42256500
transcript_79312.nnic	chr2	-	884	3	NNC	ENSG00000115944.15	novel	516	3	NA	NA	-3	4883	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGGAAAACTTAAAGACTCAA	-42351139	True	NA	NA	False	AATAAA	-21	NA	42361220	42328662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42329213_42333666_42333870_42361089
transcript_79314.known	chr2	+	3568	22	FSM	ENSG00000143924.19	ENST00000402711.6	3568	22	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_3	105.620292834774	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTGTTGCCTTCTTTAAAA	42155661	True	NA	14	True	AAGAAA	-24	NA	42169352	42330744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_79315.known	chr2	+	5546	23	FSM	ENSG00000143924.19	ENST00000318522.10	5546	23	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_3	112.662673939391	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTCTTAACTCTTTCTT	42155661	True	NA	25	True	AATAAA	-27	NA	42169352	42332548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42169637_42245504_42245688_42256500_42256631_42261120_42261295_42263177_42263307_42264705_42264732_42280849_42280974_42282822_42282973_42284633_42284704_42286268_42286380_42288226_42288323_42295124_42295260_42295380_42295517_42301240_42301393_42303103_42303230_42303314_42303447_42304483_42304552_42315961_42316051_42317426_42317525_42325466_42325555_42326153_42326253_42328885_42329017_42329733
transcript_7932.known	chr1	-	2599	5	FSM	ENSG00000223745.8	ENST00000655606.1	2599	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	7.15891053163818	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATGG	-93344967	True	NA	NA	False	NA	NA	NA	93345846	93337062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93339275_93339356_93339537_93339648_93339680_93340457_93340511_93345723
transcript_79327.known	chr2	-	895	3	FSM	ENSG00000115944.15	ENST00000464443.5	895	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	965	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTATGGAAAGAACACAGAAG	-42351111	True	NA	NA	False	NA	NA	NA	42361192	42350851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42351360_42353211_42353344_42360937
transcript_79329.known	chr2	-	516	3	FSM	ENSG00000115944.15	ENST00000468711.5	516	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	1012	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAAATGAACATAGGCTGG	-42351068	True	NA	NA	False	CATAAA	-19	NA	42361149	42333545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42333870_42353211_42353344_42361089
transcript_7933.known	chr1	-	5789	4	FSM	ENSG00000117500.13	ENST00000370282.8	5789	4	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	15.121728296285	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTCTCTCTCAAAATAT	-93176153	True	NA	NA	False	AATAAA	-16	NA	93180413	93149741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93154889_93156299_93156484_93160128_93160227_93180053
transcript_79330.known	chr2	+	5446	17	FSM	ENSG00000057935.14	ENST00000405094.2	5446	17	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_14	534.970968838497	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTTTATGCTGTTCT	42558572	True	NA	8	True	AATAAA	-15	NA	42568631	42756946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873_42709097_42718987_42719075_42722888_42723036_42753373
transcript_79341.known	chr2	+	2202	14	FSM	ENSG00000057935.14	ENST00000407270.7	2202	14	0	0	0	0	multi-exon	FALSE	canonical	3	625	junction_11	251.982741026341	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGAGACTGTATGTCTTTG	42568453	True	NA	19	True	AATAAA	-20	NA	42568516	42709544	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704193_42704319_42707902_42708055_42708873
transcript_79343.known	chr2	+	1702	14	FSM	ENSG00000057935.14	ENST00000454356.5	1702	14	0	0	0	0	multi-exon	FALSE	canonical	1	15	junction_12	400.541940567834	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTTATTTGGTTTATTT	42558615	True	NA	27	True	AATAAA	-19	NA	42568674	42709213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_42568774_42570436_42570505_42579106_42579201_42609457_42609585_42640172_42640237_42644126_42644245_42656199_42656303_42659762_42659863_42682400_42682590_42695764_42695840_42697775_42697835_42704196_42704319_42707910_42708055_42708873
transcript_7935.known	chr1	+	496	4	FSM	ENSG00000122483.18	ENST00000448243.6	496	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	7.58653778449403	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAATAAACTTAGGCAACA	93178381	True	NA	NA	False	ATTAAA	-16	NA	93180715	93186398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93180853_93183359_93183496_93183977_93184147_93186344
transcript_79358.nnic	chr2	+	442	4	NNC	ENSG00000057935.14	novel	758	9	NA	NA	16	-7130	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_3	655.544726840884	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTACAGGTCTTTTGGTGTA	42558631	True	NA	6	True	AATAAA	-18	NA	42568690	42602358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_42568774_42570436_42570505_42579106_42579201_42602161
transcript_79360.known	chr2	-	1256	10	FSM	ENSG00000162882.15	ENST00000294973.11	1256	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	4.24264068711928	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-42792222	True	NA	-1	True	AATAAA	-19	NA	42792583	42767088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42767516_42767594_42767678_42767859_42767929_42769712_42769859_42770142_42770187_42770492_42770583_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_79365.nic	chr2	-	1053	8	NIC	ENSG00000162882.15	novel	1256	10	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	2	5	junction_3	5.86584719075652	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCTGGGGGTCTGCCGCAG	-42792255	True	NA	-1	True	AATAAA	-19	NA	42792616	42767088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_42767516_42767594_42767678_42767859_42767929_42770142_42770187_42783313_42783421_42783783_42783868_42788528_42788608_42792456
transcript_79373.known	chr2	-	908	4	FSM	ENSG00000162882.15	ENST00000402268.1	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	2.16024689946929	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGGGCTTCCAGGTCACA	-42792206	True	NA	NA	False	NA	NA	NA	42792567	42782786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_42783421_42783783_42783868_42788528_42788608_42792456
transcript_79375.nnic	chr2	-	789	4	NNC	ENSG00000224739.2	novel	237	3	NA	NA	-16329	28633	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATGTTTTGGAGTAATTT	NA	False	NA	NA	False	GATAAA	-22	NA	43022389	42972721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_42973011_42980282_42980470_43001322_43001481_43022234
transcript_79377.nnic	chr2	-	548	3	NNC	ENSG00000230587.3	novel	1976	2	NA	NA	-5264	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACTTCCTCTGGGACAG	NA	False	NA	NA	False	AATAAA	-27	NA	43137746	43097737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_43098041_43132369_43132481_43137612
transcript_79378.known	chr2	-	416	2	FSM	ENSG00000230587.3	ENST00000654095.1	416	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCACTTCCTCTGGGACAG	-43132467	False	NA	NA	False	AATAAA	-27	NA	43132482	43097737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43098041_43132369
transcript_79387.nic	chr2	-	1174	9	ISM	ENSG00000115970.19	ENST00000404790.5	3043	17	-42	22221	-27	-16096	5prime_fragment	FALSE	canonical	2	48	junction_2	12.3895116933639	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTTGCTGGGTATGGTG	-43593441	True	NA	NA	False	AAAAAG	-1	NA	43596065	43578313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_79389.known	chr2	-	6091	38	FSM	ENSG00000115970.19	ENST00000405975.7	6091	38	0	0	0	0	multi-exon	TRUE	canonical	2	48	junction_31	11.1214820522588	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATGCCTCCCCTACTTCT	-43593414	True	NA	-14	True	CATAAA	-19	NA	43596038	43230850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43231344_43232712_43232883_43279764_43279897_43286907_43287062_43291695_43291769_43292103_43292223_43292833_43293214_43320445_43320541_43344121_43344238_43397970_43398140_43428099_43428232_43430212_43430303_43485233_43485326_43498832_43498956_43505621_43505736_43508647_43508781_43527878_43527989_43541158_43541317_43549209_43549369_43551788_43551926_43552203_43552340_43556344_43556556_43560233_43560386_43566697_43566822_43570387_43570511_43571706_43571863_43572813_43572993_43574335_43575028_43577021_43577243_43578512_43578608_43581740_43581929_43586400_43586450_43586701_43586735_43586853_43587003_43590823_43590955_43591951_43592047_43592316_43592417_43595930
transcript_7940.known	chr1	-	1613	4	FSM	ENSG00000223745.8	ENST00000457387.2	1613	4	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_3	6.0184900284226	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTGATAGTTCTTATTTT	-93344967	True	NA	NA	False	AAAAAG	-14	NA	93345846	93338130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93339537_93339648_93339680_93340457_93340511_93345723
transcript_79408.nnic	chr2	+	546	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-5274	64	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.5	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	43224287	False	NA	12	True	AATAAA	-23	NA	43224298	43233458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43224427_43232763_43232902_43233178
transcript_79409.nnic	chr2	+	566	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-5265	64	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	7.5	38	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	43224239	True	NA	12	True	AATAAA	-23	NA	43224307	43233458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43224427_43232734_43232902_43233178
transcript_79412.nnic	chr2	+	578	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-2770	64	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	6	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	43226785	False	NA	12	True	AATAAA	-23	NA	43226802	43233458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43226934_43232734_43232902_43233178
transcript_79413.nnic	chr2	+	531	3	NNC	ENSG00000234936.1	novel	398	3	NA	NA	-2752	64	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	8.5	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGAATTTAATGTGTCACA	43226609	True	NA	12	True	AATAAA	-23	NA	43226820	43233458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_43226934_43232763_43232902_43233178
transcript_79416.known	chr2	-	1279	1	FSM	ENSG00000223658.8	ENST00000475092.4	1279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGCTTTTTAATTT	NA	False	NA	NA	False	AATAAA	-19	NA	43676429	43675150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_43675200_43676400
transcript_79419.known	chr2	+	1346	13	FSM	ENSG00000138036.18	ENST00000605786.5	1346	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	15.3918719531518	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTACCTCTAACATGTTT	43773375	True	NA	1	True	AATAAA	-13	NA	43774081	43809997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795886_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_79421.known	chr2	+	1399	13	FSM	ENSG00000138036.18	ENST00000260605.12	1399	13	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_6	12.9644278272853	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTTAAGTGGTATATAC	43773332	True	NA	14	True	AATAAA	-26	NA	43774038	43810010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153_43805247_43809704
transcript_79425.nic	chr2	+	1427	12	ISM	ENSG00000138036.18	ENST00000260605.12	1399	13	-25	4455	-25	0	5prime_fragment	FALSE	canonical	3	35	junction_6	13.246549527336	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGCTGCTGGAGAGACAT	43773307	True	NA	8	True	ATTAAA	-19	NA	43774013	43805555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456_43794644_43795889_43795959_43796717_43796796_43800840_43800918_43801638_43801710_43804641_43804740_43805153
transcript_79437.known	chr2	+	2903	6	FSM	ENSG00000138036.18	ENST00000398823.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	30.2720993655874	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCAGCATTTTATATTATC	43773357	True	NA	NA	False	AATAAA	-22	NA	43774063	43795183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43792675
transcript_79438.known	chr2	+	1133	6	FSM	ENSG00000138036.18	ENST00000406852.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_2	11.9431989014669	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGAGCAGCATTTTATAT	43773342	True	NA	NA	False	AATAAA	-18	NA	43774048	43795179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_43774147_43776781_43776900_43783519_43783555_43787180_43787251_43789632_43789722_43794456
transcript_79445.known	chr2	+	2608	6	FSM	ENSG00000138032.21	ENST00000282412.9	2608	6	0	0	0	0	multi-exon	TRUE	canonical	3	494	junction_5	140.413674547745	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	44158381	True	NA	NA	False	AATAAA	-23	NA	44168874	44231472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_79446.known	chr2	+	3877	6	FSM	ENSG00000138032.21	ENST00000378551.6	3877	6	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_5	177.078965436327	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTAGCCTGGCTATTCT	44158383	True	NA	NA	False	AGTAAA	-35	NA	44168876	44234646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44201185_44202046_44209209_44209328_44217966_44218079_44218479_44218538_44232315
transcript_79448.known	chr2	+	1713	5	FSM	ENSG00000138032.21	ENST00000345249.8	1713	5	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	333.252906964065	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCATGTTGTACTTATTTTT	44158416	True	NA	NA	False	AATAAA	-23	NA	44168909	44231472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44169275_44209209_44209328_44217966_44218079_44218479_44218538_44230412
transcript_7945.known	chr1	+	10124	3	FSM	ENSG00000117505.13	ENST00000370272.9	10124	3	0	0	0	0	multi-exon	FALSE	canonical	3	332	junction_1	16	388	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGCTTTACATATGTCTTT	93336579	True	NA	NA	False	TATAAA	-15	NA	93345906	93369493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93346866_93353907_93354072_93360492
transcript_79452.known	chr2	-	3080	15	FSM	ENSG00000138078.16	ENST00000410081.5	3080	15	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_14	45.6363174389406	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCGTTAAAGTTTTTGAATA	-44361788	False	NA	-124	True	GATAAA	-17	NA	44361806	44320921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44359751_44361379
transcript_79454.known	chr2	-	5212	15	FSM	ENSG00000138078.16	ENST00000409936.5	5212	15	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_14	51.5401567236853	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTTTTGTAATTTTATTT	-44357353	True	NA	-10	True	ATTAAA	-13	NA	44361494	44318765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44359496_44360039_44361379
transcript_79457.known	chr2	-	5829	14	FSM	ENSG00000138078.16	ENST00000409411.6	5829	14	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_13	47.0081196561771	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTTTCTCAATGTCTAG	-44357353	True	NA	NA	False	ATTAAA	-19	NA	44361494	44317606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361379
transcript_79458.known	chr2	-	6049	14	FSM	ENSG00000138078.16	ENST00000541738.5	6049	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_13	52.331103358311	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAATGTTTCTCAATGT	-44361844	False	NA	NA	False	ATTAAA	-15	NA	44361862	44317610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361523
transcript_79460.known	chr2	-	4703	14	FSM	ENSG00000138078.16	ENST00000409957.5	4703	14	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_13	52.0866369760929	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTAATTTTATTTTTT	-44357420	True	NA	-7	True	ATTAAA	-16	NA	44361561	44318762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44321446_44321826_44321901_44322730_44322855_44323261_44323412_44326711_44326929_44328936_44329113_44332458_44332657_44338350_44338537_44339146_44339364_44342416_44342553_44343744_44343952_44344519_44344587_44346267_44346391_44361416
transcript_79468.nic	chr2	-	302	2	ISM	ENSG00000138078.16	ENST00000438314.1	660	6	-68	16649	0	-14258	5prime_fragment	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGATGGCCTTACATTT	-44357420	True	NA	NA	False	AATAAA	-18	NA	44361561	44360556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_44360677_44361379
transcript_7947.known	chr1	-	750	3	FSM	ENSG00000117500.13	ENST00000370280.1	750	3	0	0	0	0	multi-exon	FALSE	canonical	3	266	junction_2	3.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGTAAGTTTGTTTTATA	-93180243	False	NA	NA	False	TATAAA	-32	NA	93180261	93156039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93156484_93160128_93160227_93180053
transcript_79472.nnic	chr2	+	1704	12	NIC	ENSG00000143919.15	novel	1512	11	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	82.0634706988469	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	44358581	True	NA	32	True	AATAAA	-29	NA	44361928	44772592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554_44549729_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_79473.known	chr2	+	1512	11	FSM	ENSG00000143919.15	ENST00000378494.8	1512	11	0	0	0	0	multi-exon	FALSE	canonical	3	171	junction_6	26.4839574082122	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAATTGTATTAAATCCGCC	44358599	True	NA	32	True	AATAAA	-29	NA	44361946	44772592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44704282_44704344_44706286_44706342_44707398_44707463_44715286_44715354_44743621_44743697_44754054_44754119_44766429_44766562_44772035
transcript_79483.nnic	chr2	+	905	5	NNC	ENSG00000143919.15	novel	665	4	NA	NA	-18	51160	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	126.894641336819	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATCAAAAGAATTGTTGG	44358581	True	NA	NA	False	AATAAA	-30	NA	44361928	44682874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554_44549729_44682598
transcript_79484.nnic	chr2	+	1044	5	NIC	ENSG00000143919.15	novel	665	4	NA	NA	-18	-38960	combination_of_known_splicesites	FALSE	canonical	1	4	junction_3	124.412619938654	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAATAAAGACATTCTT	44358581	True	NA	NA	False	NA	NA	NA	44361928	44704697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554_44549729_44704282
transcript_79488.nic	chr2	+	644	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-176	9072	-18	0	5prime_fragment	FALSE	canonical	3	14	junction_3	114.182115743034	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGCGATGAGTACCTATAT	44358581	True	NA	5	True	AATAAA	-16	NA	44361928	44392073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
transcript_79489.nic	chr2	+	713	4	ISM	ENSG00000143919.15	ENST00000454433.5	843	7	-176	9003	-18	69	5prime_fragment	FALSE	canonical	3	14	junction_3	114.182115743034	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGTCTTATACTATTTTA	44358581	True	NA	74	True	AATAAA	-23	NA	44361928	44392142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_44362146_44372715_44372889_44390240_44390306_44391884
transcript_79491.known	chr2	+	1114	4	FSM	ENSG00000143919.15	ENST00000403853.7	1114	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	117.465834276279	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAAAATGGAGATGACTCT	44358616	True	NA	NA	False	AATAAA	-33	NA	44361963	44457261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44456567
transcript_79494.known	chr2	+	665	4	FSM	ENSG00000143919.15	ENST00000402247.5	665	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	118.873415400117	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATCCTAGAACAAAGACATAG	44358602	True	NA	NA	False	NA	NA	NA	44361949	44549785	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44362146_44372715_44372889_44390240_44390306_44549554
transcript_7950.nic	chr1	-	912	3	ISM	ENSG00000117500.13	ENST00000370290.7	3847	5	80	6597	-23	-2415	5prime_fragment	FALSE	canonical	3	14	junction_1	126	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGTATCTTACTGCTTCCT	-93176176	True	NA	NA	False	AATAAA	-18	NA	93180436	93158454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_93158886_93160128_93160227_93180053
transcript_79507.known	chr2	-	581	3	FSM	ENSG00000259439.3	ENST00000444871.3	582	3	0	1	0	-1	multi-exon	FALSE	canonical	2	3	junction_2	1	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAGTCACTTAATCT	-44938875	False	NA	-2	True	AATAAA	-12	NA	44938888	44931121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44931478_44935279_44935439_44938822
transcript_79508.known	chr2	-	910	2	FSM	ENSG00000259439.3	ENST00000432125.2	910	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGCATCAGTATGGTTGGA	-44935631	False	NA	NA	False	NA	NA	NA	44935644	44923034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44923580_44935279
transcript_79509.nic	chr2	-	1003	2	FSM	ENSG00000259439.3	ENST00000685287.1	881	2	-123	1	-123	-1	multi-exon	FALSE	canonical	2	5	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTGGAGTCACTTAATCT	-44935726	True	NA	-2	True	AATAAA	-12	NA	44935926	44931121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44931478_44935279
transcript_79510.known	chr2	-	844	2	FSM	ENSG00000236502.2	ENST00000419364.2	887	2	43	0	43	0	multi-exon	FALSE	canonical	1	1	junction_1	0	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGCCTTTCCAGAAGAAAA	-44941810	True	NA	1	True	AATAAA	-20	NA	44941873	44940153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_44940834_44941709
transcript_79512.known	chr2	+	2713	2	FSM	ENSG00000138083.5	ENST00000260653.5	2713	2	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCCAGAGACTGGTGTTTT	44941320	True	NA	40	True	AATACA	-22	NA	44941701	44946071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_44942911_44944567
transcript_79513.nnic	chr2	-	596	2	NNC	ENSG00000231156.1	novel	367	2	NA	NA	-908	63	intron_retention	FALSE	canonical	2	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTGGTCCCCTGACTTGG	-45014542	True	NA	NA	False	AATAAA	-27	NA	45014576	45013150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_45013548_45014377
transcript_79515.known	chr2	-	3667	21	FSM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_20	19.602232015768	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTTTTGCTATGTTGA	-45608035	True	NA	-1	True	AATAAA	-17	NA	45611267	45388679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_45389600_45392944_45393130_45413113_45413294_45418364_45418542_45419787_45419895_45476992_45477076_45488239_45488332_45546731_45546840_45547521_45547613_45551124_45551283_45553622_45553731_45562652_45562757_45573206_45573343_45574626_45574724_45579874_45580014_45581692_45581811_45585607_45585775_45599448_45599836_45601902_45602084_45605361_45605442_45611218
transcript_7952.known	chr1	-	321	3	FSM	ENSG00000223745.8	ENST00000602488.5	321	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGTCTAATGCTTTCTACT	NA	False	NA	-2	True	AATAAA	-27	NA	93273583	93264637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93264773_93269682_93269759_93273473
transcript_79529.nic	chr2	-	546	4	ISM	ENSG00000068784.13	ENST00000263736.5	3667	21	0	210920	0	2322	5prime_fragment	FALSE	canonical	3	100	junction_3	29.2612751298063	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGGAAGAGAATGACGATG	-45608035	True	NA	NA	False	NA	NA	NA	45611267	45599599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_45599836_45601902_45602084_45605361_45605442_45611218
transcript_7953.known	chr1	+	3889	15	FSM	ENSG00000137942.18	ENST00000370253.6	3889	15	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_14	70.0027696245087	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTTAGTGTGTGATCTT	93434910	False	NA	27	True	AATAAA	-24	NA	93448281	93554661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946_93551106_93552408
transcript_79532.nnic	chr2	+	553	2	Antisense	novelGene_ENSG00000068784.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAAATAAGGCTGCTGTTG	NA	False	NA	NA	False	AATAAA	-17	NA	45610595	45611541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_45610757_45611149
transcript_79551.known	chr2	-	1061	7	FSM	ENSG00000151665.13	ENST00000306465.8	1061	7	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	176.014203972293	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612612	True	NA	NA	False	AATAAA	-15	NA	46617051	46581284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46581592_46588074_46588180_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_79574.known	chr2	-	1294	6	FSM	ENSG00000151665.13	ENST00000281382.11	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_5	40.2541923282532	1432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCCTATCTGGGAGGGAG	-46612602	True	NA	NA	False	NA	NA	NA	46617041	46580936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46614936_46615186_46616969
transcript_79578.known	chr2	+	4780	5	FSM	ENSG00000119729.12	ENST00000238738.9	4780	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	16.4772570532841	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGTCAGGCTTTGTAC	46542349	True	NA	16	True	ATTAAA	-28	NA	46542489	46584688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46543189_46543753_46543813_46576086_46576252_46576560_46576657_46580927
transcript_79580.known	chr2	+	6323	5	FSM	ENSG00000119878.6	ENST00000238892.4	6323	5	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_1	27.4089401473315	2098	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAATCTTTTTCATATT	46611470	True	NA	NA	False	NA	NA	NA	46617214	46630176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46617299_46618772_46618839_46619626_46619682_46623763_46623868_46624162
transcript_79593.nnic	chr2	-	783	5	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-72	0	combination_of_known_splicesites	FALSE	canonical	3	96	junction_4	157.697495224243	362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612688	True	NA	NA	False	AATAAA	-15	NA	46617127	46581284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46613693_46613786_46616969
transcript_79596.known	chr2	-	737	5	FSM	ENSG00000151665.13	ENST00000412717.1	737	5	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	192.332232088124	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAAGCCAAGCAGTTCCA	-46612616	True	NA	NA	False	NA	NA	NA	46617055	46581415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46581592_46592474_46592584_46612227_46612345_46614936_46615186_46616969
transcript_796.known	chr1	+	6616	5	FSM	ENSG00000228794.11	ENST00000445118.7	6616	5	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	12.2983738762488	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAATGACTATATAACAT	826887	True	NA	NA	False	AATAAA	-19	NA	827597	859446	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827776_829002_829105_851926_852111_852670_852767_853390
transcript_7960.known	chr1	+	5341	14	FSM	ENSG00000137942.18	ENST00000260506.12	5341	14	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_8	36.3998179330904	496	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGTGTTTAGTGTGTGATC	93434759	True	NA	25	True	AATAAA	-22	NA	93448130	93554659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_93448306_93499467_93499584_93522081_93522136_93523343_93523492_93524260_93524324_93529651_93529757_93530754_93530884_93532921_93533069_93534704_93534909_93544106_93544217_93546841_93546975_93547346_93547442_93549277_93549427_93550946
transcript_79606.nnic	chr2	-	671	4	NIC	ENSG00000151665.13	novel	1061	7	NA	NA	-52	0	combination_of_known_splicesites	FALSE	canonical	3	35	junction_3	206.117010996721	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCTTCAGATGCTGCT	-46612668	True	NA	NA	False	AATAAA	-15	NA	46617107	46581284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_46581592_46592474_46592584_46612227_46612345_46616969
transcript_7961.nic	chr1	-	1460	6	ISM	ENSG00000137936.18	ENST00000539242.5	2114	8	2564	4	2564	0	3prime_fragment	FALSE	canonical	3	41	junction_3	6.15142259969188	28	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTGTATCCAGTCTCTTT	NA	False	NA	3	True	AATACA	-14	NA	93582518	93561790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_93562420_93567278_93567492_93567739_93567852_93571669_93571842_93576013_93576130_93582300
transcript_79614.known	chr2	+	4766	2	FSM	ENSG00000171150.9	ENST00000394861.3	4766	2	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTCATCTGTATTTTGTT	46697839	True	NA	NA	False	AATACA	-20	NA	46699294	46763129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_46699450_46758518
transcript_79615.known	chr2	-	821	5	FSM	ENSG00000180398.13	ENST00000409973.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	292.705910428881	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCTAAGTGCTATTAAATAC	-46908606	True	NA	-47	True	AATGAA	-29	NA	46915810	46905270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46910779_46910874_46915722
transcript_79619.known	chr2	-	3978	4	FSM	ENSG00000180398.13	ENST00000649435.1	3978	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	251.212172387318	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTGTAAACTATTCTTGTA	-46908557	True	NA	-97	True	NA	NA	NA	46915761	46901966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905591_46907809_46907970_46909022_46909178_46915722
transcript_79620.known	chr2	-	648	4	FSM	ENSG00000180398.13	ENST00000409218.5	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	276.514415939246	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAAATAACTCATTTCCA	NA	False	NA	-26	True	NA	NA	NA	46916112	46905393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46915980
transcript_79621.known	chr2	-	1113	4	FSM	ENSG00000180398.13	ENST00000409207.5	1113	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	273.217861787988	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTGGGTCTCTCCCACAA	-46940886	True	NA	NA	False	NA	NA	NA	46941732	46904957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46909022_46909178_46941571
transcript_7963.nic	chr1	-	1188	2	ISM	ENSG00000137936.18	ENST00000370244.5	3217	14	-102	282917	-102	-91605	5prime_fragment	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAGAAGAAAGTCACAGCC	-93847116	True	NA	NA	False	AAGAAA	-11	NA	93847252	93844707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_93845713_93847069
transcript_79632.known	chr2	-	3975	3	FSM	ENSG00000180398.13	ENST00000409913.5	3975	3	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	255	678	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	-46908612	True	NA	-4	True	AATAAA	-16	NA	46915816	46901873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46915722
transcript_79633.known	chr2	-	3955	3	FSM	ENSG00000180398.13	ENST00000409800.5	3955	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	304.5	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCGAGCAGTTGATTTTGT	-46916010	True	NA	-4	True	AATAAA	-16	NA	46916054	46901873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46915980
transcript_79634.known	chr2	-	671	3	FSM	ENSG00000180398.13	ENST00000409147.1	671	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	299	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGCAGCATTTTGGTAAAA	NA	False	NA	0	True	NA	NA	NA	46941855	46905367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46907809_46907970_46941571
transcript_79637.known	chr2	-	665	3	FSM	ENSG00000180398.13	ENST00000477791.5	665	3	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_2	56	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCGTAGTTCTACGTACTCA	-46908587	True	NA	NA	False	ATTAAA	-27	NA	46915791	46907528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46907970_46909022_46909178_46915722
transcript_79640.known	chr2	-	807	2	FSM	ENSG00000180398.13	ENST00000493804.1	807	2	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCAAATCTCATGTCCTCA	-46908585	True	NA	NA	False	NA	NA	NA	46915789	46904854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46915722
transcript_79641.known	chr2	-	552	2	FSM	ENSG00000180398.13	ENST00000470873.1	552	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGGGCTTGCTTCAAG	-46940927	True	NA	-21	True	ATTAAA	-10	NA	46941773	46905244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_46905595_46941571
transcript_79645.known	chr2	-	983	9	FSM	ENSG00000273269.3	ENST00000422269.1	983	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3388.40432347956	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGAGGGACCAGGAAACTC	-47099978	True	NA	NA	False	AAGAAA	-27	NA	47176511	47065940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47066138_47090269_47090375_47121012_47121154_47129940_47129996_47130195_47130261_47151257_47151516_47152956_47153017_47170733_47170765_47176440
transcript_79650.known	chr2	-	1165	7	FSM	ENSG00000143933.20	ENST00000456319.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_6	4235.12774305569	749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTACAATTTACCCAATGGT	-47099983	True	NA	-37	True	AATAAA	-4	NA	47176516	47160179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47172413_47172460_47176440
transcript_79653.known	chr2	-	1076	6	FSM	ENSG00000143933.20	ENST00000655728.1	1076	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	3719.8455129212	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCGTACACTATTTTTTTG	-47176206	False	76533	NA	False	NA	NA	NA	47176223	47160338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176031
transcript_79654.known	chr2	-	1294	6	FSM	ENSG00000143933.20	ENST00000656538.1	1294	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	3720.24334687934	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATTTGTTTTCCAATA	-47099978	True	NA	-62	True	NA	NA	NA	47176511	47160204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176235
transcript_79661.known	chr2	-	1242	6	FSM	ENSG00000143933.20	ENST00000652974.1	1242	6	0	0	0	0	multi-exon	FALSE	canonical	3	8699	junction_1	552.787988292076	31999	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGTTGCTCTGCATCTGAGT	NA	False	NA	-21	True	AATAAA	-20	NA	47176623	47160163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176440
transcript_79662.known	chr2	-	1004	5	FSM	ENSG00000143933.20	ENST00000432899.5	1004	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4204.73687494235	805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCCAATGGTTGCTCTGC	-47099967	True	NA	-29	True	AATAAA	-12	NA	47176500	47160171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162518_47162663_47170733_47170765_47176440
transcript_79663.known	chr2	-	1126	6	FSM	ENSG00000143933.20	ENST00000655450.1	1126	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3723.42603525302	1744	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAATGGTTGCTCTGCAT	NA	False	NA	-27	True	AATAAA	-14	NA	47176921	47160169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47170733_47170765_47176848
transcript_79664.known	chr2	-	770	7	FSM	ENSG00000143933.20	ENST00000409563.5	770	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	4413.13718408521	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTTTATTTGCCTTTTCT	-47099978	True	NA	NA	False	NA	NA	NA	47176511	47160738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47160805_47161722_47161859_47162285_47162393_47162518_47162663_47167475_47167691_47170733_47170765_47176440
transcript_79670.known	chr2	-	1046	4	FSM	ENSG00000234690.7	ENST00000413185.2	1046	4	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGCACAATAAATGTAATGT	-47344661	True	NA	NA	False	AATAAA	-1	NA	47344989	47331379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_47332108_47332272_47332409_47332933_47333027_47344900
transcript_79673.known	chr2	+	200	1	FSM	ENSG00000236824.2	ENST00000418539.2	200	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATATTCTTGCCTGGAAGA	47335256	True	NA	NA	False	NA	NA	NA	47335314	47335514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47335300_47335500
transcript_79677.known	chr2	+	3115	16	FSM	ENSG00000095002.15	ENST00000233146.7	3115	16	0	0	0	0	multi-exon	FALSE	canonical	3	1525	junction_3	231.912301432148	1565	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	47378693	True	NA	30	True	AATAAA	-19	NA	47403155	47483223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_79678.known	chr2	+	3628	16	FSM	ENSG00000095002.15	ENST00000406134.5	3628	16	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_15	504.412221193033	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACCAGTTCCAAAGAAGCTCA	47378667	True	NA	NA	False	NA	NA	NA	47403129	47513234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47512302
transcript_79684.nnic	chr2	+	3288	15	NIC	ENSG00000095002.15	novel	3115	16	NA	NA	-234	0	intron_retention	FALSE	canonical	3	63	junction_4	514.336490548944	863	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGATGCATTGTAGTTC	NA	False	NA	30	True	AATAAA	-19	NA	47402832	47483223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964_47471063_47475024_47475271_47476366_47476572_47478271_47478520_47480695_47480872_47482778
transcript_7969.known	chr1	-	5896	7	FSM	ENSG00000067334.14	ENST00000436063.7	5896	7	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_5	80.2650124414257	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCATTGTCACATAGTTT	-93868910	True	NA	NA	False	ATTAAA	-17	NA	93879206	93866283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93875644_93875784_93876267_93877863_93879076
transcript_79691.nic	chr2	+	2061	11	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-323	12218	-234	-12216	5prime_fragment	FALSE	canonical	3	1525	junction_3	145.447722567251	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAATATGAAGAAGCCCAG	NA	False	NA	NA	False	AATAAA	-2	NA	47402832	47471005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413_47412561_47414268_47414419_47416295_47416430_47429741_47429942_47445547_47445658_47463030_47463155_47466657_47466809_47470964
transcript_79704.nic	chr2	+	790	4	ISM	ENSG00000095002.15	ENST00000233146.7	3115	16	-67	70768	22	-70766	5prime_fragment	FALSE	canonical	3	1525	junction_3	157.628959550233	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACTTTTCCACAAAAGA	47378626	True	NA	NA	False	AATAGA	-42	NA	47403088	47412455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_47403403_47408400_47408556_47410093_47410373_47412413
transcript_79708.known	chr2	+	3959	10	FSM	ENSG00000116062.18	ENST00000673637.1	3959	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	382.790275557946	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACATTATGATCTAATAAAC	47764663	True	NA	-8	True	NA	NA	NA	47783150	47806915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47783232_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_7971.known	chr1	-	2199	6	FSM	ENSG00000067334.14	ENST00000359208.6	2199	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	331.182366680353	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACGTTTGGAAAACTAACA	-93868866	True	NA	-34	True	NA	NA	NA	93879162	93869797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93869945_93870682_93870793_93872071_93872237_93873118_93873215_93876267_93877863_93879076
transcript_79713.nnic	chr2	+	967	2	NNC	ENSG00000116062.18	novel	2219	2	NA	NA	-151	-10768	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGACGGCTGTGCATGAATT	NA	False	NA	4	True	AATAAA	-17	NA	47695378	47699065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_47696098_47698817
transcript_79714.known	chr2	+	4055	10	FSM	ENSG00000116062.18	ENST00000538136.1	4055	10	0	0	0	0	multi-exon	FALSE	canonical	1	18	junction_3	469.654193772817	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATGACCATTTTTCCAT	47783000	True	NA	22	True	AATAAA	-12	NA	47783954	47806945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47784106_47790926_47791124_47795893_47796064_47798614_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_79715.known	chr2	+	4265	10	FSM	ENSG00000116062.18	ENST00000234420.11	4265	10	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_1	242.272777598789	308	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATTTTTCCATTTTCTTTC	47764657	True	NA	30	True	AATAAA	-20	NA	47783144	47806953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47783494_47790926_47791124_47795893_47796064_47798610_47801156_47803419_47803686_47804909_47805028_47805617_47805708_47806203_47806359_47806451_47806652_47806778
transcript_79717.nnic	chr2	+	1215	2	Genic_Genomic	ENSG00000236549.1	novel	455	1	NA	NA	-192799	24	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGGCTGGGCGCAGGA	NA	False	NA	NA	False	AATAAA	-1	NA	47690655	47883933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_47691379_47883441
transcript_79720.known	chr2	+	656	2	FSM	ENSG00000233230.2	ENST00000417692.2	1041	2	19	366	12	154	multi-exon	FALSE	canonical	3	11	junction_1	0	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTGAGATGATCTCTCT	47906712	True	NA	NA	False	NA	NA	NA	47906829	47907810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_47906993_47907317
transcript_79724.known	chr2	-	963	3	FSM	ENSG00000230773.9	ENST00000661667.1	963	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTTTGTTCTAAGTTGT	-48314069	False	116	NA	False	AATATA	-34	NA	48314185	48242803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_48243620_48313689_48313765_48314113
transcript_79725.nnic	chr2	-	602	3	NNC	ENSG00000230773.9	novel	1400	9	NA	NA	-6	-18214	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCTCAACACTTTTCT	-48314114	False	116	NA	False	AATAAA	-23	NA	48314230	48261017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_48261428_48313689_48313765_48314113
transcript_79726.nnic	chr2	+	676	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTGGCTCCACGTTGATT	48047170	True	NA	NA	False	AAAACA	-4	NA	48047316	48090334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_79728.nnic	chr2	+	916	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGATTAGGTATGCAAAAG	48047170	True	NA	NA	False	ATTAAA	-21	NA	48047316	48090574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_79730.nnic	chr2	+	1819	2	Antisense	novelGene_ENSG00000230773.9_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	13	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATTTTGATATATTGAG	48047170	True	NA	NA	False	AATAAA	-26	NA	48047316	48091477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_48047765_48090106
transcript_79732.known	chr2	+	5437	7	FSM	ENSG00000170802.17	ENST00000340553.8	5437	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	22.3084438423362	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	48312226	True	NA	9	True	AATAAA	-19	NA	48314681	48379295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48314815_48328560_48328703_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_79733.nic	chr2	+	5354	6	NIC	ENSG00000170802.17	novel	5437	7	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	57	junction_1	8.65794432876535	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGCTTTCTCTGATCTT	48312167	True	NA	9	True	AATAAA	-19	NA	48314622	48379295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_48314815_48346200_48346752_48359046_48359148_48362642_48362708_48373291_48373361_48374919
transcript_79737.known	chr2	-	555	1	FSM	ENSG00000272663.1	ENST00000609028.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTTATGTGGATACTG	-48440539	False	NA	NA	False	AATAAA	-36	NA	48440597	48440042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_48440000_48440600
transcript_79739.known	chr2	+	3208	22	FSM	ENSG00000162869.16	ENST00000416913.5	3208	22	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	27.5493373131652	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTTTCAGTCTCTCTATTAA	48440748	False	NA	26	True	AATAAA	-17	NA	48440768	48515385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_79740.known	chr2	+	3173	22	FSM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_16	15.3881009482538	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTCAGTCTCTCTATTAAA	48440745	False	NA	27	True	AATAAA	-18	NA	48440765	48515386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278_48471368_48474682_48474820_48479923_48480017_48486630_48486759_48491017_48491171_48495678_48495772_48498492_48498736_48505563_48505597_48507268_48507386_48510014_48510114_48511339_48511469_48514714
transcript_79748.nic	chr2	+	1398	11	ISM	ENSG00000162869.16	ENST00000416913.5	3208	22	-3	43935	0	0	5prime_fragment	FALSE	canonical	3	18	junction_2	37.4113619105213	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	48440745	False	NA	13	True	AATAAA	-14	NA	48440765	48471450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_48441011_48451007_48451077_48454555_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_79749.nic	chr2	+	1359	11	ISM	ENSG00000162869.16	ENST00000294952.13	3173	22	0	43936	0	0	5prime_fragment	FALSE	canonical	3	108	junction_6	15.9386323127174	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTTGTGATCTGCCTGAC	48440745	False	NA	13	True	AATAAA	-14	NA	48440765	48471450	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_48441011_48451007_48451077_48454594_48454742_48458125_48458228_48459753_48459919_48460094_48460154_48461137_48461233_48464936_48464990_48465492_48465643_48471086_48471189_48471278
transcript_79756.nic	chr2	+	297	2	ISM	ENSG00000243244.7	ENST00000406226.1	5614	5	-59	67594	-27	-998	5prime_fragment	FALSE	canonical	2	3	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGGATTGTACTGCTTCT	48528489	True	NA	NA	False	ATTAAA	-12	NA	48530126	48530919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_48530217_48530712
transcript_79758.nnic	chr2	-	980	2	NIC	ENSG00000179915.25	novel	1164	4	NA	NA	-247	2	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGACACAATCCAATTTC	NA	False	NA	1	True	CATAAA	-22	NA	50623617	50619292	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_50619969_50623313
transcript_79760.nic	chr2	-	1315	2	ISM	ENSG00000179915.25	ENST00000626899.1	2543	6	14	108652	14	-48	5prime_fragment	FALSE	canonical	3	12	junction_1	0	46	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACTAGATAAAGGAGGGCAC	-51032453	True	NA	NA	False	AAAAAG	-1	NA	51032522	51028421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_51029195_51031980
transcript_79764.known	chr2	-	453	4	FSM	ENSG00000228033.6	ENST00000443237.1	453	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.16024689946929	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAAAGCTTTATTTTTTTT	NA	False	NA	NA	False	AATAAA	-27	NA	52910020	52722676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_52722864_52726671_52726819_52897242_52897305_52909963
transcript_79766.known	chr2	-	2226	10	FSM	ENSG00000115239.24	ENST00000263634.8	2226	10	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_9	29.0287214094363	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCAGTTGCTTTTTTTTTTT	-53783147	True	NA	-5	True	ATTAAA	-16	NA	53786953	53669979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53765376_53765586_53786820
transcript_79770.known	chr2	-	1734	9	FSM	ENSG00000115239.24	ENST00000394717.3	1734	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	84.6174294988922	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-53783203	True	NA	NA	False	NA	NA	NA	53787009	53670318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_53670691_53693883_53694015_53700270_53700529_53714383_53714582_53716565_53716744_53728711_53728848_53729457_53729571_53750782_53750942_53786820
transcript_7978.known	chr1	-	4883	7	FSM	ENSG00000023909.10	ENST00000370238.8	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_5	10.9341463112378	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATAAAGCTATTTATGCAT	-93909362	False	155	NA	False	AATAAA	-24	NA	93909430	93885198	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_93889160_93894613_93894729_93896617_93896821_93897838_93897899_93901584_93901670_93904522_93904589_93909037
transcript_79782.nnic	chr2	-	1103	4	NNC	ENSG00000115239.24	novel	623	3	NA	NA	7	-4324	at_least_one_novel_splicesite	TRUE	canonical	3	10	junction_1	106.728107304912	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCTCTGTGTGTGTCTTTA	-53783196	True	NA	0	True	NA	NA	NA	53787002	53733784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_53734338_53750782_53750942_53765376_53765586_53786820
transcript_79785.nic	chr2	-	465	2	ISM	ENSG00000115239.24	ENST00000470916.5	581	5	-153	50727	7	-8432	5prime_fragment	FALSE	canonical	3	215	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTATTAACAGTAGTATTTG	-53783196	True	NA	NA	False	AATAAA	-24	NA	53787002	53765302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_53765586_53786820
transcript_79787.known	chr2	+	1309	3	FSM	ENSG00000143942.5	ENST00000295304.5	1309	3	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_2	16	1058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATGTAGTCTGTCATTCAC	53765441	True	NA	21	True	CATAAA	-28	NA	53767803	53775196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53768022_53771906_53771943_53774141
transcript_79789.known	chr2	+	2446	14	FSM	ENSG00000068912.15	ENST00000185150.9	2446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	104.469694934767	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTGTCATGTAGTCAATG	53779770	True	NA	4	True	AATAAA	-14	NA	53787043	53818796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_79794.known	chr2	+	1756	13	FSM	ENSG00000068912.15	ENST00000405123.7	1756	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	133.814859663143	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGATTCCAAAATAAATCTC	53779806	True	NA	72	True	TATAAA	-28	NA	53787079	53818220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53808298_53808461_53809213_53809274_53812948_53813074_53814859_53814936_53817897
transcript_79795.known	chr2	+	2271	13	FSM	ENSG00000068912.15	ENST00000378239.5	2271	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	129.508043508244	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTATTAAATTTCTTTATT	53779806	True	NA	27	True	AATAAA	-37	NA	53787079	53818819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731_53797796_53799046_53799082_53801396_53801621_53801712_53801843_53809213_53809274_53812948_53813074_53814542_53814621_53814859_53814936_53817897
transcript_7980.known	chr1	-	486	1	FSM	ENSG00000286692.1	ENST00000659885.1	486	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCACAGTACATCACGTA	-94418209	True	NA	NA	False	AATAAA	-26	NA	94418228	94417742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94417700_94418200
transcript_79810.nic	chr2	+	695	5	ISM	ENSG00000068912.15	ENST00000690769.1	2759	8	-15	5737	-3	1544	5prime_fragment	FALSE	canonical	3	330	junction_4	21.6491916708223	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGTGTCTACCCAGTGAT	53779732	True	NA	NA	False	AAAAAG	-1	NA	53787005	53797795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_53787373_53794344_53794450_53795932_53796014_53797514_53797593_53797731
transcript_79815.known	chr2	+	993	4	FSM	ENSG00000170634.13	ENST00000394666.7	993	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	6.18241233033047	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	54115452	False	NA	NA	False	CATAAA	-26	NA	54115503	54305300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_54115757_54135452_54135470_54138638_54138749_54304687
transcript_79816.known	chr2	+	1262	7	FSM	ENSG00000170634.13	ENST00000607452.6	1262	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	21.2661703181367	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGGTTAATGTGAACATT	53970059	True	NA	NA	False	CATAAA	-26	NA	53971112	54305300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54135452_54135470_54138638_54138749_54304687
transcript_79817.known	chr2	+	1115	5	FSM	ENSG00000170634.13	ENST00000422521.2	1115	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	27.4897708247995	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCACACATCCCTCCATAC	53970054	True	NA	NA	False	AATAAA	-17	NA	53971107	54066047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_53971322_53973712_53973811_54050957_54051051_54057238_54057361_54065459
transcript_79818.nic	chr2	+	890	4	ISM	ENSG00000115306.16	ENST00000333896.5	9075	31	-34	46066	-34	-12962	5prime_fragment	FALSE	canonical	3	374	junction_1	47.3943268991366	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAGAAATCTGCCAAGGA	54548413	True	NA	NA	False	NA	NA	NA	54558359	54616242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206
transcript_79819.known	chr2	+	9075	31	FSM	ENSG00000115306.16	ENST00000333896.5	9075	31	0	0	0	0	multi-exon	FALSE	canonical	3	374	junction_1	151.715629459269	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCCTTGTTTTCTTGGTT	54548447	True	NA	5	True	ATTAAA	-20	NA	54558393	54662308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_54558888_54599091_54599244_54612160_54612335_54616206_54616299_54617607_54617689_54618077_54618194_54621399_54621513_54622299_54622488_54623478_54623597_54624803_54624963_54625931_54626235_54628096_54628251_54628932_54629804_54629891_54630030_54630854_54631612_54632565_54632769_54637712_54637804_54642982_54643130_54644322_54644587_54645228_54645454_54645927_54646018_54646193_54646476_54647130_54647262_54648985_54649191_54649614_54649990_54653608_54653854_54655069_54655209_54655913_54655999_54657849_54658047_54659153_54659267_54659935
transcript_7982.known	chr1	+	3604	23	FSM	ENSG00000117528.14	ENST00000370214.9	3604	23	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_13	14.4360230094919	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACAGTGTCTCTTTTTTAA	94416622	True	NA	16	True	AATAAA	-18	NA	94418388	94518663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94480463_94480607_94483169_94483240_94487541_94487612_94487693_94487792_94487891_94487984_94489724_94489817_94489902_94489976_94491183_94491248_94498601_94498680_94498782_94498849_94498944_94499035_94499494_94499615_94506537_94506643_94515145_94515203_94517051
transcript_79822.nic	chr2	-	1674	7	NIC	ENSG00000115310.19	novel	2333	7	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	418.42897313111	652	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGCTTTGGTATTTTCATT	-55049688	False	NA	-4	True	AATAAA	-17	NA	55049698	54972188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_79830.nic	chr2	-	1066	7	NIC	ENSG00000115310.19	novel	1898	7	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	21	junction_6	418.42897313111	507	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCCTTTTCAGTTTGTGCA	-55049688	False	NA	21	True	NA	NA	NA	55049698	54972796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_54973199_54973562_54973622_54973820_54973868_54974694_54974765_54982514_54982654_54987490_54987699_55049557
transcript_79854.known	chr2	+	705	6	FSM	ENSG00000143947.15	ENST00000402285.7	705	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	6678.41612959241	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AATAAAAGACATGAACTAAC	55231870	False	NA	7	True	NA	NA	NA	55231902	55235588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232109_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_79866.known	chr2	+	785	6	FSM	ENSG00000143947.15	ENST00000272317.11	785	6	0	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_3	4356.5800072993	116205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCAGTTTGTGTTTCTGTCC	55014735	True	NA	10	True	AATATA	-2	NA	55232687	55235853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232709_55232807_55232873_55233362_55233418_55234118_55234205_55234830_55234963_55235427
transcript_79867.known	chr2	+	1159	4	FSM	ENSG00000143947.15	ENST00000495843.1	1159	4	0	0	0	0	multi-exon	FALSE	canonical	1	5833	junction_2	5300.37552128778	3353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTATTGTTGGGTTTTATTG	55232777	False	NA	28	True	AATAAA	-16	NA	55232794	55235609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55232873_55233362_55233418_55234118_55234963_55235427
transcript_79868.known	chr2	-	596	3	FSM	ENSG00000162994.16	ENST00000494539.5	596	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.5	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTCTTTGAAATATTTATAC	-55232286	False	NA	3	True	AATAAA	-31	NA	55232303	55175638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55175987_55177601_55177782_55232235
transcript_7987.known	chr1	+	884	9	FSM	ENSG00000117528.14	ENST00000315713.5	884	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	31.1277609217239	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACTTGTACTTATTGTTT	94416712	False	NA	NA	False	AATAAA	-23	NA	94418478	94478723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94418589_94458606_94458644_94464774_94464874_94467918_94468008_94473765_94473836_94475142_94475241_94475613_94475738_94478258_94478316_94478523
transcript_79882.known	chr2	-	2536	16	FSM	ENSG00000085760.15	ENST00000263629.9	2536	16	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_15	32.4293419949006	456	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-55266688	True	NA	5	True	ATTAAA	-42	NA	55269231	55236594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268577_55268740_55269168
transcript_79884.nnic	chr2	-	2460	16	NNC	ENSG00000085760.15	novel	2536	16	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_14	57.3203861350102	251	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGTGTTGTTTGTTTGAAGG	-55266710	True	NA	-21	True	ATTAAA	-16	NA	55269253	55236620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55268649_55268740_55269168
transcript_79891.known	chr2	-	2386	15	FSM	ENSG00000085760.15	ENST00000403721.5	2386	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_14	57.8775977950935	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCACTACTACTGGCCAAAA	-55266700	True	NA	5	True	ATTAAA	-42	NA	55269243	55236594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55236821_55237287_55237429_55240010_55240176_55242939_55243081_55243415_55243669_55244028_55244234_55246336_55246462_55249394_55249535_55252476_55252654_55254040_55254202_55254653_55254826_55262315_55262428_55263639_55263866_55267568_55267636_55269168
transcript_79917.nic	chr2	-	2363	13	ISM	ENSG00000115355.18	ENST00000644630.1	2971	16	-107	5147	-48	-2767	intron_retention	FALSE	canonical	3	37	junction_2	6.69732533677935	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCAAAGGCTCAGTAAAAAGG	-55417297	False	NA	NA	False	AAAAAG	-5	NA	55419943	55339482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016
transcript_79921.known	chr2	-	2971	16	FSM	ENSG00000115355.18	ENST00000644630.1	2971	16	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_15	14.8063049633143	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGATAAGAAACAATTGGAG	-55417190	True	NA	48	True	AATAAA	-32	NA	55419836	55334335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55335165_55336680_55336819_55339463_55339649_55343647_55343793_55344367_55344515_55346174_55346334_55349517_55349600_55355578_55355752_55362307_55362449_55363949_55364034_55372451_55372511_55374813_55374884_55388777_55388887_55418815_55418917_55419016_55419474_55419744
transcript_79922.nnic	chr2	+	478	3	Genic_Genomic	ENSG00000162997.15	novel	541	2	NA	NA	-2919	0	multi-exon	FALSE	canonical	0	0	junction_2	1	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTCTTATTTGTAA	55279317	False	NA	4	True	AATAAA	-14	NA	55279399	55284472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_55279602_55281288_55281396_55284303
transcript_79923.known	chr2	+	626	2	FSM	ENSG00000162997.15	ENST00000579162.1	626	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGTATCCTTAGTTTGGT	55282303	False	NA	54	True	TATAAA	-23	NA	55282328	55284522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55282435_55284002
transcript_79924.known	chr2	+	2154	1	FSM	ENSG00000162997.15	ENST00000563365.1	2154	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTTTTTCTTATTTGTAA	55282293	True	NA	4	True	AATAAA	-14	NA	55282318	55284472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55282300_55284500
transcript_79927.known	chr2	+	1184	10	FSM	ENSG00000163001.12	ENST00000349456.9	1184	10	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_6	17.4100864762675	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	55516935	True	NA	15	True	AATAAA	-21	NA	55519717	55545079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55543937_55544075_55544219_55544370_55544906
transcript_79928.known	chr2	+	1575	8	FSM	ENSG00000163001.12	ENST00000406691.7	1575	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	69.4814613360122	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTTTTGACAATTATG	55516863	True	NA	NA	False	AAGAAA	-13	NA	55519645	55539543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55538764
transcript_79929.known	chr2	+	759	6	FSM	ENSG00000163001.12	ENST00000403007.4	759	6	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	14.0769314838142	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCTATGTATGTCGTGCAT	55516948	True	NA	NA	False	AATATA	-7	NA	55519730	55535914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711
transcript_7993.known	chr1	-	2298	6	FSM	ENSG00000117525.14	ENST00000334047.12	2298	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_5	7.78203058333749	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGACTGCACTTCTTCTC	-94541251	True	NA	53	True	AATACA	-15	NA	94541759	94529172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94530597_94532320_94532481_94533089_94533269_94535964_94536165_94540256_94540369_94541536
transcript_79930.known	chr2	+	1125	10	FSM	ENSG00000163001.12	ENST00000407816.7	1125	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	67.8316725613421	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTTTAGTTTCGAACACT	55516907	True	NA	15	True	AATAAA	-21	NA	55519689	55545079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55519917_55522101_55522167_55523720_55523823_55528877_55528993_55533872_55533961_55535711_55535764_55537482_55537586_55544024_55544075_55544219_55544370_55544906
transcript_79931.known	chr2	-	5506	17	FSM	ENSG00000275052.5	ENST00000616407.2	5506	17	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_15	84.773572496091	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTGTTTTAATCACTA	-55611202	True	NA	-1	True	AATAAA	-18	NA	55617622	55547291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55578246_55578343_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_79934.known	chr2	-	4310	16	FSM	ENSG00000275052.5	ENST00000616288.4	4310	16	0	0	0	0	multi-exon	FALSE	canonical	1	88	junction_14	68.9110215342139	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGATGTTTGTGTTTGG	-55611188	True	NA	NA	False	ATTAAA	-20	NA	55617608	55548377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55550007_55558774_55558969_55564312_55564498_55564901_55565042_55568193_55568364_55573618_55573778_55577314_55577357_55579678_55579782_55581566_55581699_55585050_55585168_55586617_55586735_55588878_55588957_55598415_55599040_55603977_55604077_55615450_55615507_55617143
transcript_79940.nnic	chr2	-	2046	3	NNC	ENSG00000275052.5	novel	2981	3	NA	NA	-190	179	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	176.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	-55617658	False	NA	-4	True	ATTAAA	-21	NA	55617812	55613996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_55615314_55615446_55615507_55617143
transcript_79942.nic	chr2	-	2179	2	ISM	ENSG00000275052.5	ENST00000612688.1	2981	3	1068	-179	-190	179	3prime_fragment	FALSE	canonical	3	353	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGAAGATGTTTCCTATAC	-55617658	False	NA	-4	True	ATTAAA	-21	NA	55617812	55613996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_55615507_55617143
transcript_79943.known	chr2	-	2981	3	FSM	ENSG00000275052.5	ENST00000612688.1	2981	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	174	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTATTATTACAAAGTCT	-55618726	True	NA	NA	False	AATAAA	-17	NA	55618880	55614175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55615507_55617143_55617979_55618065
transcript_79945.known	chr2	+	465	1	FSM	ENSG00000272606.1	ENST00000608113.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	347	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTTGGAAAGTAAGTCTGCT	55617616	True	NA	30	True	AATACA	-22	NA	55617908	55618373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_55617900_55618400
transcript_79947.known	chr2	-	4549	28	FSM	ENSG00000138035.15	ENST00000447944.7	4549	28	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_17	34.4977285986143	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCGACTATTATTTAATAA	-55689059	True	NA	0	True	ATTAAA	-23	NA	55693844	55634060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55636393_55637551_55637600_55640626_55640706_55643157_55643214_55643318_55643426_55644636_55644721_55645348_55645433_55646258_55646323_55646414_55646487_55647346_55647454_55654899_55654954_55656130_55656221_55656304_55656372_55660156_55660194_55661955_55662027_55666990_55667094_55667861_55667959_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_79954.nnic	chr2	-	1538	12	NNC	ENSG00000138035.15	novel	583	6	NA	NA	8	8979	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	123.02314503733	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGATCTGTGAAATTG	-55689070	True	NA	NA	False	AATATA	-18	NA	55693855	55670702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_55671233_55671318_55671377_55671994_55672047_55672892_55673080_55679681_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55686369_55686445_55687644_55687706_55693662
transcript_79958.known	chr2	-	583	6	FSM	ENSG00000138035.15	ENST00000429805.1	583	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	174.754227416678	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTGTTTTAAATACCA	-55689078	True	NA	NA	False	TTTAAA	-36	NA	55693863	55679681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55679796_55680711_55680760_55680854_55680919_55683784_55683835_55684942_55685049_55693662
transcript_79960.known	chr2	-	2708	12	FSM	ENSG00000115380.20	ENST00000355426.8	2708	12	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_10	40.7061633605673	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	-55921399	True	NA	-4	True	AATAAA	-25	NA	55923782	55865966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55922898_55922940_55923710
transcript_79962.known	chr2	-	3024	11	FSM	ENSG00000115380.20	ENST00000394555.6	3024	11	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_10	18.7072178583562	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTTTGGAGGTTTTT	NA	False	NA	-4	True	AATAAA	-25	NA	55924139	55865966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55876622_55876743_55877745_55877866_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_79970.nic	chr2	-	1839	9	NIC	ENSG00000115380.20	novel	1809	9	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	2	15	junction_4	49.7743345008248	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGGGATCTGCCATAT	-55921456	True	NA	-19	True	AATAAA	-16	NA	55923839	55866611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_55867235_55870719_55870916_55870999_55871124_55874945_55875066_55881611_55881735_55917664_55918052_55918218_55918268_55922359_55922448_55923710
transcript_79979.nnic	chr2	+	814	3	NNC	ENSG00000271894.1	novel	2289	4	NA	NA	-29634	-204518	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	5	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTGAGTTTCTGTT	56117728	True	NA	8	True	AATAAA	-18	NA	56117995	56181653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_56118172_56147629_56147741_56181126
transcript_79989.nic	chr2	+	1976	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	10	0	combination_of_known_junctions	TRUE	canonical	3	27	junction_12	71.5812113790009	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046496	False	NA	8	True	AATAAA	-19	NA	58046651	58159871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154753_58154803_58159348
transcript_79990.nic	chr2	+	1840	14	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-23	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_12	70.3214091988775	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046687	False	NA	8	True	AATAAA	-19	NA	58046782	58159871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58154758_58154803_58159348
transcript_79995.nic	chr2	+	1908	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	-18	0	combination_of_known_junctions	FALSE	canonical	3	76	junction_1	48.0745948154185	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58046611	False	NA	8	True	AATAAA	-19	NA	58046623	58159871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58046822_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_79996.known	chr2	+	1773	13	FSM	ENSG00000028116.18	ENST00000340157.9	1773	13	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_11	25.844083784624	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043793	True	NA	8	True	AATAAA	-19	NA	58046805	58159871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_79998.nnic	chr2	+	2019	13	NIC	ENSG00000028116.18	novel	1773	13	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	61.5541202700698	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTGTCATAGAATAGTGTC	58043807	True	NA	8	True	AATAAA	-19	NA	58046819	58159871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_58047129_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_8.known	ERCC-00019	+	627	1	FSM	ERCC-00019A	DQ883651	627	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	183	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00019_+_0_600
transcript_80.known	ERCC-00165	+	856	1	FSM	ERCC-00165A	DQ668363	856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	448	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00165_+_0_900
transcript_80003.known	chr2	+	1916	12	FSM	ENSG00000028116.18	ENST00000412104.6	1916	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	68.0117879913852	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAGATCACCTAGGAAAT	58046486	True	NA	57	True	AAAACA	-10	NA	58046641	58159920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58046869_58048826_58048968_58084088_58084139_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807_58131929_58135140_58135200_58139665_58139833_58146315_58146475_58159348
transcript_8001.known	chr1	-	5956	6	FSM	ENSG00000224081.10	ENST00000634870.1	5956	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	2.0591260281974	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCTTCAACTGCAAAAGAA	-94819981	True	NA	NA	False	NA	NA	NA	94820277	94613813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94617072_94622718_94624610_94638436_94638559_94679424_94679608_94732257_94732438_94819955
transcript_80011.nic	chr2	+	2083	9	ISM	ENSG00000028116.18	ENST00000340157.9	1773	13	-49	26774	42	-26687	5prime_fragment	FALSE	canonical	3	202	junction_1	20.5756986515647	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTTAATTCTAATGATTA	58046661	False	NA	NA	False	AATAAA	-27	NA	58046756	58133097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_58046869_58048826_58048968_58084088_58084139_58084880_58084951_58086338_58086427_58088340_58088447_58089630_58089724_58123100_58123234_58131807
transcript_80027.known	chr2	-	849	10	FSM	ENSG00000115392.12	ENST00000403676.5	849	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	150.979354324023	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAACATTTCGGTGAAGAGCT	-58235773	False	NA	NA	False	NA	NA	NA	58241302	58159754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198593_58198663_58204129_58204227_58241217
transcript_80035.known	chr2	+	338	1	FSM	ENSG00000273063.1	ENST00000608934.1	338	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGTAGCACTCTGTCTTC	58241303	False	NA	5	True	AATAAA	-20	NA	58241348	58241686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58241300_58241700
transcript_80036.known	chr2	-	1698	14	FSM	ENSG00000115392.12	ENST00000402135.7	1698	14	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_7	105.375631284653	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAAGTTTTTGCGTGTTATT	-58235821	True	NA	-7	True	AATAAA	-14	NA	58241350	58159246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58163433_58163518_58165723_58165875_58198578_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_80037.known	chr2	-	1576	13	FSM	ENSG00000115392.12	ENST00000403295.7	1576	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	137.320691165688	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTTGCGTGTTATTTTTC	-58235794	True	NA	-3	True	AATAAA	-18	NA	58241323	58159242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58159801_58160107_58160180_58161521_58161639_58162865_58162948_58163028_58163075_58165723_58165875_58198593_58198663_58204129_58204227_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_80038.known	chr2	-	522	6	FSM	ENSG00000115392.12	ENST00000481670.2	522	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	185.833904333951	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAGAAGTGGTGTGCATGGA	-58235730	False	NA	-2	True	AATAAA	-16	NA	58241259	58213504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_58213707_58221941_58222043_58226727_58226785_58229813_58229875_58232053_58232113_58241217
transcript_80040.known	chr2	+	1182	7	FSM	ENSG00000233723.10	ENST00000422793.3	1187	7	0	5	0	0	multi-exon	FALSE	canonical	1	5	junction_2	4.03112887414927	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCATCTTGGCATCTACTT	58428164	True	NA	5	True	AATAAA	-17	NA	58428411	58931076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58428465_58461777_58461846_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_80041.known	chr2	+	1268	6	FSM	ENSG00000233723.10	ENST00000429664.6	1268	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	3.49857113690718	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCCACTATATGCCAAGTAAT	58428090	True	NA	85	True	AATAAA	-19	NA	58428337	58931156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_58428465_58656649_58656712_58850429_58850607_58924544_58924627_58925610_58925910_58930635
transcript_80046.nnic	chr2	+	1029	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	5.5	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	NA	False	NA	9	True	AATAAA	-14	NA	60417628	60424691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_60417982_60419876_60420153_60424291
transcript_80048.nnic	chr2	+	803	3	Antisense	novelGene_ENSG00000228590.3_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	7	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTCAGGGATGTTTTCTC	NA	False	NA	9	True	AATAAA	-14	NA	60417663	60424691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_60417982_60420067_60420153_60424291
transcript_80051.known	chr2	-	1519	5	FSM	ENSG00000119866.22	ENST00000489516.7	1519	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_4	174.837603220817	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCAGGATTTGAATTTGTC	-60550915	False	2227	NA	False	AATATA	-18	NA	60550925	60451780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60550867
transcript_80052.nnic	chr2	-	1342	5	NNC	ENSG00000119866.22	novel	2494	5	NA	NA	654	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_4	183.584279011031	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	-60552745	False	NA	-7	True	AATAAA	-14	NA	60552755	60452157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60552497
transcript_80053.known	chr2	-	2494	5	FSM	ENSG00000119866.22	ENST00000359629.10	2494	5	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_1	151.358845133015	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAGTGAACTACCTTATA	-60551407	True	NA	NA	False	AATAAA	-14	NA	60553634	60451166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60452667_60462281_60462425_60468731_60468834_60545970_60546301_60553215
transcript_80054.known	chr2	-	866	4	FSM	ENSG00000119866.22	ENST00000643222.1	866	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	19.6185852927496	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTCATGAGTGATGCCCTG	-60550897	False	2227	NA	False	NA	NA	NA	60550907	60452313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60452667_60462281_60462425_60545970_60546301_60550867
transcript_80057.nnic	chr2	-	919	3	NIC	ENSG00000119866.22	novel	1325	4	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	16.5	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGGTGTTTGCTTGTTCTT	-60550937	False	NA	-7	True	AATAAA	-14	NA	60550947	60452157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_60452667_60545970_60546301_60550867
transcript_80060.known	chr2	-	758	3	FSM	ENSG00000119866.22	ENST00000409351.5	758	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	231	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAATTTTCAGCATGGCAG	-60553490	False	NA	54	True	AATAAA	-18	NA	60553500	60541782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60541926_60545970_60546301_60553215
transcript_80061.known	chr2	-	369	2	FSM	ENSG00000119866.22	ENST00000647469.1	369	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTATTTTTCTTTTCTCTTT	-60546249	False	NA	-4	True	TATAAA	-23	NA	60546259	60541840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60541921_60545970
transcript_80063.known	chr2	+	7348	22	FSM	ENSG00000115421.13	ENST00000238714.8	7348	22	0	0	0	0	multi-exon	TRUE	canonical	3	112	junction_6	18.3795953113643	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGATGATTGAGTGATGTT	60754300	True	NA	NA	False	AATAAA	-17	NA	60756267	60802086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_60756496_60760133_60760296_60761740_60761808_60768469_60768552_60768780_60768891_60770457_60770512_60771518_60771631_60775033_60775124_60779636_60779776_60780706_60780780_60781884_60782006_60782685_60782771_60783155_60783210_60786946_60787067_60787510_60787621_60791760_60791883_60792128_60792290_60793626_60793716_60793970_60794192_60794709_60794776_60794963_60795021_60797061
transcript_80067.known	chr2	+	11255	11	FSM	ENSG00000162924.15	ENST00000295025.12	11255	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	2.62488094968134	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTGCTGAAATTTTGTTG	60880588	True	NA	16	True	AATAAA	-17	NA	60881520	60931610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_60881851_60891682_60891826_60894396_60894546_60900991_60901084_60916876_60917018_60918190_60918296_60918393_60918607_60920040_60920110_60920382_60920479_60920573_60920643_60921762
transcript_80080.known	chr2	+	4472	4	FSM	ENSG00000162928.9	ENST00000295030.6	4472	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	4.49691252107735	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACTTTTTAAGATAAATT	61014032	True	NA	9	True	AATAAA	-17	NA	61017719	61051990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017852_61031418_61032114_61045725_61045852_61048471
transcript_80086.nnic	chr2	-	1304	4	NNC	ENSG00000162927.14	novel	1227	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.07106781186548	93	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61017190	False	NA	0	True	AATAAA	-16	NA	61017223	61009847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_61010889_61011764_61011906_61013437_61013485_61017148
transcript_80092.known	chr2	+	1108	3	FSM	ENSG00000162928.9	ENST00000401576.1	1108	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	16	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGGTGACTATTGTCCTT	61017530	False	NA	16	True	AATAAA	-30	NA	61017561	61019081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017616_61017695_61017852_61018183
transcript_80097.known	chr2	-	1227	3	FSM	ENSG00000162927.14	ENST00000398658.2	1227	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	6	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61016944	True	NA	0	True	AATAAA	-16	NA	61017193	61009847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61010889_61011764_61011906_61017148
transcript_80098.nnic	chr2	-	1475	3	NNC	ENSG00000162927.14	novel	1227	3	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	7.5	107	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61017417	False	NA	0	True	AATAAA	-16	NA	61017450	61009847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_61010889_61011764_61011906_61017157
transcript_80100.nic	chr2	-	1490	3	NIC	ENSG00000162927.14	novel	1227	3	NA	NA	-56	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_2	6.5	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGAAAGATTTTTTC	-61018282	False	NA	0	True	AATAAA	-16	NA	61018315	61009847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_61010889_61011764_61011906_61018007
transcript_80101.nnic	chr2	+	2004	2	NNC	ENSG00000162928.9	novel	1533	2	NA	NA	56	3401	intron_retention	FALSE	canonical	3	9	junction_1	0	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTGTATCAACCTTC	61017266	True	NA	41	True	AATAAA	-25	NA	61017280	61022482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_61017852_61021049
transcript_80102.nnic	chr2	+	1280	2	NNC	ENSG00000162928.9	novel	1533	2	NA	NA	68	4	intron_retention	TRUE	canonical	3	5	junction_1	0	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTCTTTATAGTGGTGAC	61017278	True	NA	6	True	AATAAA	-20	NA	61017292	61019071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_61017852_61018350
transcript_80103.known	chr2	+	1014	2	FSM	ENSG00000162928.9	ENST00000414712.2	1014	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGTGGTGACTATTGTCCT	61014042	True	NA	15	True	AATAAA	-29	NA	61017729	61019080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61017852_61018188
transcript_80105.known	chr2	-	1820	18	FSM	ENSG00000162927.14	ENST00000407787.5	1820	18	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_17	3.28780908528991	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTATATTTTGTGTTAAAT	-61016944	True	NA	NA	False	NA	NA	NA	61017193	60942224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_60942434_60945008_60945109_60948042_60948186_60952996_60953115_60953932_60953989_60954081_60954159_60955017_60955075_60960391_60960518_60961462_60961549_60962825_60962891_60965057_60965104_60965422_60965485_60967501_60967614_60971522_60971558_61006556_61006644_61008760_61009016_61011764_61011906_61017148
transcript_80106.known	chr2	+	4578	22	FSM	ENSG00000162929.14	ENST00000402291.6	4578	22	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_21	24.2799246133308	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTTGGAAAGTCTCTTT	61063768	True	NA	7	True	AATAAA	-15	NA	61065870	61124280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_80117.nic	chr2	+	925	6	NIC	ENSG00000162929.14	novel	2640	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_5	31.0393298896738	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CAGTGTGTCTCTCTCTGTTC	61063768	True	NA	NA	False	ATTAAA	-32	NA	61065870	61075173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61073457_61073552_61074982
transcript_80131.known	chr2	+	4472	21	FSM	ENSG00000162929.14	ENST00000453186.5	4472	21	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	23.9616360042465	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGTTTGGAAAGTCTC	61063777	True	NA	4	True	AATAAA	-12	NA	61065879	61124277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61066028_61068848_61068986_61070341_61070501_61071605_61071793_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357_61088469_61092463_61092588_61097699_61097853_61103852_61103999_61106562_61106663_61108316_61108350_61109196_61109297_61115978_61116071_61117356_61117386_61117466_61117541_61118027_61118117_61121184_61121277_61122125
transcript_80134.nic	chr2	+	1044	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	50.2841923470985	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	61144209	True	NA	8	True	AATAAA	-21	NA	61145073	61164828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_61145197_61157861_61158013_61162841_61162956_61163051_61163233_61164353
transcript_80137.nnic	chr2	+	1015	5	NIC	ENSG00000237651.8	novel	565	5	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	56.966547200967	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTATTAGGTACATCATA	61144209	True	NA	8	True	AATAAA	-21	NA	61145073	61164828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_61145197_61159317_61159440_61162841_61162956_61163051_61163233_61164353
transcript_80148.known	chr2	+	726	3	FSM	ENSG00000237651.8	ENST00000464909.2	726	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	67	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTTGTTTGTACAAAT	61144243	True	NA	-11	True	AATAAA	-2	NA	61145107	61164809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61145197_61163051_61163233_61164353
transcript_80151.known	chr2	-	595	3	FSM	ENSG00000212978.6	ENST00000422740.1	595	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	90	TAAAAAAAAAAAAAAAAAGA	-61144088	True	NA	NA	False	NA	NA	NA	61144891	61143567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61143946_61144168_61144267_61144772
transcript_80153.known	chr2	-	2532	2	FSM	ENSG00000212978.6	ENST00000420918.3	2532	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCACGGGTATACCAGTGGA	-61144147	True	NA	-19	True	AATAAA	-17	NA	61144950	61141591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61143946_61144772
transcript_80154.known	chr2	-	892	2	FSM	ENSG00000212978.6	ENST00000417691.1	892	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAGAAAAGCGGGTCCTA	-61144149	True	NA	NA	False	ATTAAA	-10	NA	61144952	61143554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61144267_61144772
transcript_80155.known	chr2	+	2640	11	FSM	ENSG00000162929.14	ENST00000482513.5	2640	11	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	29.4319554226354	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATCTCAAATAAATAAAATAA	61063768	True	NA	NA	False	NA	NA	NA	61065870	61089670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61066028_61068848_61068986_61069651_61069699_61070341_61070501_61071605_61071793_61073457_61073552_61076919_61077159_61081451_61081511_61083153_61083315_61088158_61088246_61088357
transcript_80156.known	chr2	+	879	4	FSM	ENSG00000237651.8	ENST00000426997.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.7861485458088	634	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATTTTTGTTTGTACAAA	61144203	True	NA	-12	True	AATAAA	-1	NA	61145067	61164808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61145197_61162841_61162956_61163051_61163233_61164353
transcript_80157.known	chr2	+	565	5	FSM	ENSG00000237651.8	ENST00000398622.3	565	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	18.7399973319102	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCAGAAGAGGAGAACCAAAT	61144266	True	NA	NA	False	AAAACA	-15	NA	61145130	61163163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61145197_61157861_61158013_61159317_61159440_61162841_61162956_61163051
transcript_80158.known	chr2	-	11675	80	FSM	ENSG00000115464.15	ENST00000398571.7	11675	80	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_66	143.333437421167	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTACATACGTTGCTT	-61471056	False	NA	-11	True	ATTAAA	-21	NA	61471087	61187462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61188710_61188909_61189070_61190270_61190415_61190517_61190659_61192900_61192981_61203139_61203264_61204255_61204381_61204496_61204602_61206016_61206125_61206759_61206887_61208898_61208978_61211771_61211930_61214059_61214695_61220309_61220458_61221501_61221607_61222618_61222664_61223059_61223165_61223247_61223297_61227066_61227219_61228644_61228720_61228826_61228996_61229547_61229634_61232451_61232533_61235844_61235911_61236025_61236074_61236160_61236237_61236324_61236390_61241559_61241656_61241765_61241820_61245209_61245289_61246323_61246478_61248510_61248684_61256383_61256479_61256872_61256951_61257051_61257109_61257203_61257351_61259710_61259777_61265396_61265558_61265983_61266168_61278164_61278286_61278387_61278444_61280243_61280349_61281089_61281243_61283144_61283270_61283408_61283450_61284874_61284958_61288676_61288878_61293463_61293551_61294948_61295033_61295167_61295291_61296799_61296926_61300950_61301161_61301353_61301455_61311539_61311688_61311783_61311911_61314584_61314745_61314874_61314975_61317653_61317768_61319172_61319328_61325374_61325458_61331275_61331372_61333881_61333972_61339350_61339479_61339565_61339682_61343814_61344030_61347869_61348481_61348755_61348887_61349249_61349286_61350259_61350390_61350567_61350694_61370320_61370414_61370497_61370580_61378362_61378425_61380168_61380362_61383268_61383337_61394852_61395003_61395182_61395234_61405707_61406129_61420745_61420834_61470649
transcript_80161.nnic	chr2	+	1078	7	NIC	ENSG00000173209.23	novel	2437	7	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	1	21	junction_1	125.304185440427	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATGTAAAGCATTGTTTGAC	61174287	True	NA	109	True	NA	NA	NA	61177441	61186912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_61177689_61178980_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_80163.known	chr2	+	2437	7	FSM	ENSG00000173209.23	ENST00000357022.6	2437	7	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	124.360586825391	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCAAGTGTGCTTTATTTC	61174263	True	NA	8	True	AATAAA	-20	NA	61177417	61187551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61178385_61178980_61179172_61181319_61181406_61184711_61184801_61185501_61185619_61186445_61186498_61186616
transcript_80166.known	chr2	-	4105	25	FSM	ENSG00000082898.19	ENST00000404992.6	4105	25	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_24	293.055028962139	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCGTTTGTCTAGACTACA	-61536635	False	NA	NA	False	TTTAAA	-45	NA	61537110	61478337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61536709
transcript_80167.known	chr2	-	4988	25	FSM	ENSG00000082898.19	ENST00000401558.7	4988	25	0	0	0	0	multi-exon	FALSE	canonical	2	723	junction_18	187.653932183391	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGACCCCTTGATTTACAAAC	-61515208	True	NA	75	True	AATGAA	-4	NA	61538356	61477848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61537561
transcript_80168.known	chr2	-	4603	25	FSM	ENSG00000082898.19	ENST00000676553.1	4603	25	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_24	291.960539452204	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCTTGTCTAACTCTACT	NA	False	NA	38	True	NA	NA	NA	61538741	61477688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61478967_61481184_61481282_61482379_61482540_61482956_61483092_61483936_61484106_61485767_61485963_61488164_61488272_61488587_61488772_61490641_61490777_61492034_61492199_61492324_61492482_61492566_61492749_61492914_61493054_61493893_61494092_61495454_61495614_61496878_61497008_61498672_61498793_61498864_61498914_61499712_61499895_61501995_61502041_61502248_61502311_61522610_61522684_61526419_61526522_61533771_61533904_61538491
transcript_80174.nic	chr2	-	1213	4	ISM	ENSG00000082898.19	ENST00000443240.5	565	7	158	20606	48	3455	internal_fragment	FALSE	canonical	3	927	junction_2	59.4025813131607	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGTAGGAAAATAAAGAATTA	-61537993	False	NA	-2	True	GATAAA	-38	NA	61538468	61522611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_61522684_61526419_61526522_61533771_61533904_61537561
transcript_80176.known	chr2	-	720	3	FSM	ENSG00000082898.19	ENST00000481214.1	720	3	0	0	0	0	multi-exon	FALSE	canonical	3	927	junction_1	1	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGGCACCTCTGACACCAA	-61537219	False	NA	NA	False	AATATA	-8	NA	61537694	61526066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61526522_61533771_61533904_61537561
transcript_80178.known	chr2	-	3777	7	FSM	ENSG00000170264.13	ENST00000404929.6	3777	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	17.8208679175099	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGGTTTTTATATACTTAC	-61852553	True	NA	2	True	AATAAA	-25	NA	61854060	61824847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61838537_61838706_61839420_61840582_61842121_61842361_61853858
transcript_80180.known	chr2	-	3684	6	FSM	ENSG00000170264.13	ENST00000405894.3	3684	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	9.52050418832952	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGAATATGGTTTTTAT	NA	False	NA	-6	True	AATAAA	-17	NA	61854143	61824855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840582_61842121_61842361_61853858
transcript_80182.known	chr2	-	3579	6	FSM	ENSG00000170264.13	ENST00000456262.5	3579	6	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	16.6685332288117	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAATATGGTTTTTATAT	NA	False	NA	-4	True	AATAAA	-19	NA	61854092	61824853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61826600_61827103_61827259_61836009_61836110_61839420_61840526_61842121_61842361_61853858
transcript_80186.nic	chr2	-	777	3	ISM	ENSG00000170264.13	ENST00000404929.6	3777	7	-2	15400	-2	-4191	5prime_fragment	FALSE	canonical	3	56	junction_1	3.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAGAGTCCATGAAATCTAA	-61852555	True	NA	16	True	AAGAAA	-4	NA	61854062	61840247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_61840582_61842121_61842361_61853858
transcript_80195.known	chr2	-	388	2	FSM	ENSG00000115484.15	ENST00000461370.1	388	2	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_1	0	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGAGACGAATTGGGTGAAC	-61858191	False	NA	-8	True	AATAAA	-19	NA	61888458	61887947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61888258_61888380
transcript_80196.known	chr2	-	2376	14	FSM	ENSG00000115484.15	ENST00000394440.8	2376	14	0	0	0	0	multi-exon	FALSE	canonical	3	2676	junction_12	297.415136322295	2228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTTGTTCCAGTGATTTT	-61858389	True	NA	2	True	NA	NA	NA	61888656	61868084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_61868707_61869439_61869554_61872081_61872317_61872457_61872589_61873001_61873113_61873196_61873294_61876094_61876235_61876919_61877053_61877392_61877515_61878868_61879012_61880285_61880395_61883458_61883549_61885019_61885073_61888380
transcript_80203.known	chr2	+	629	3	FSM	ENSG00000173163.11	ENST00000472729.1	629	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	198	105	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGCCTCTACTTGCTCA	61888636	True	NA	28	True	ATTAAA	-16	NA	61888723	62136058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_61888843_62000700_62000983_62135830
transcript_80208.known	chr2	-	1654	4	FSM	ENSG00000186889.10	ENST00000335390.6	1654	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0.942809041582063	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATCCTTGTCTTGTGCAAT	-62506141	False	NA	NA	False	AATAAA	-31	NA	62506195	62500217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_62501488_62502436_62502551_62502690_62502795_62506029
transcript_80212.nnic	chr2	+	802	6	NNC	ENSG00000115504.15	novel	1311	9	NA	NA	0	18694	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_5	20.9437341465174	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAATTATTGTCTCTTGTG	62704115	True	NA	NA	False	ATTAAA	-15	NA	62705651	62790828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62790718
transcript_80216.nnic	chr2	+	1029	3	NNC	ENSG00000115504.15	novel	5105	23	NA	NA	12	8549	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	3	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCACTTGGTGTGG	62704127	True	NA	NA	False	AATAAA	-17	NA	62705663	62715541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_62706053_62706896_62707296_62715300
transcript_80217.known	chr2	+	1311	9	FSM	ENSG00000115504.15	ENST00000405482.5	1311	9	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	12.1423844445809	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTGTGGATATGAGCAAG	62704115	True	NA	NA	False	CATAAA	-39	NA	62705651	62864904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_62705737_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730
transcript_80218.nic	chr2	+	593	2	ISM	ENSG00000115504.15	ENST00000431489.6	5105	23	13	339325	13	170	5prime_fragment	FALSE	canonical	2	8	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAACTGCTCCAGTGTCTTGA	62704189	True	NA	10	True	ATTAAA	-21	NA	62705725	62707162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_62706053_62706896
transcript_80219.known	chr2	+	5105	23	FSM	ENSG00000115504.15	ENST00000431489.6	5105	23	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	15.7383697056504	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGCTGCTACTTTCTTGC	62704176	True	NA	13	True	AATAAA	-24	NA	62705712	63046487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_62706053_62706896_62707296_62747394_62747453_62764265_62764362_62771338_62771393_62826086_62826269_62831018_62831159_62859168_62859292_62864730_62864972_62874345_62874533_62942717_62942897_62943801_62943851_62948259_62949163_62955516_62955661_62979187_62979336_62990715_62990841_62993529_62993669_62993870_62993978_62996642_62996767_63037534_63037635_63038742_63038817_63045065_63045181_63045409
transcript_8022.known	chr1	+	2045	15	FSM	ENSG00000143036.17	ENST00000529450.5	2045	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	5.92469752952221	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	94820181	False	NA	2	True	AATAAA	-16	NA	94820400	94895053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867333_94867418_94891129_94891268_94892280_94892518_94894817
transcript_80220.nic	chr2	+	830	3	ISM	ENSG00000115507.10	ENST00000405984.8	1694	5	-27	3037	-26	0	5prime_fragment	FALSE	canonical	2	4	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTCCTGCACCCATTTTTG	63050687	True	NA	NA	False	ATTAAA	-16	NA	63050803	63053546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_63050898_63051248_63051318_63052879
transcript_80222.known	chr2	-	4894	18	FSM	ENSG00000143951.16	ENST00000272321.12	4894	18	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_15	5.20047908360008	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCTAAAAGTTTTTGCTTC	-63588462	False	NA	-43	True	AATAAA	-19	NA	63588477	63119558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_63122057_63152913_63152946_63153494_63153575_63174669_63174833_63259306_63259410_63313247_63313312_63378385_63378510_63381905_63382095_63404047_63404658_63433744_63433937_63437420_63437555_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_80224.nnic	chr2	-	1151	8	NNC	ENSG00000143951.16	novel	847	8	NA	NA	33	-1010	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	11.3999641961486	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCGTGTCTCTGAGTTATCC	NA	False	NA	0	True	ATTAAA	-19	NA	63588766	63438466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_63438624_63439756_63439872_63484603_63484664_63484916_63484988_63486541_63486587_63487446_63487495_63492855_63492941_63588196
transcript_8023.known	chr1	+	2381	15	FSM	ENSG00000143036.17	ENST00000271227.11	2381	15	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_5	3.68394198806504	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTTAGCAGAAATCTCT	94820137	True	NA	NA	False	AATAAA	-22	NA	94820356	94895246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820479_94820948_94821057_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_80232.known	chr2	-	754	2	FSM	ENSG00000143951.16	ENST00000484073.1	754	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTTCCACCTAAGTGAC	-63588485	False	NA	NA	False	AATGAA	-43	NA	63588500	63564174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_63564625_63588196
transcript_80238.known	chr2	+	1443	9	FSM	ENSG00000014641.21	ENST00000432309.6	1443	9	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	1580.43711813378	1608	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTGACTCAGACTCTGTT	63589138	False	NA	13	True	AATAAA	-15	NA	63589150	63607194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589385_63594487_63594587_63595422_63595520_63597398_63597575_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_80242.known	chr2	+	808	6	FSM	ENSG00000014641.21	ENST00000409476.5	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	1862.16598615698	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACAACACATTTTAAAGATT	63563926	True	NA	-90	True	NA	NA	NA	63588972	63607091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589047_63599169_63599293_63604695_63604873_63605279_63605394_63605938_63606029_63606861
transcript_80245.known	chr2	+	634	2	FSM	ENSG00000014641.21	ENST00000462944.1	634	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTTTTTTGTGTTATAGA	63563938	True	NA	NA	False	AATAAA	-29	NA	63588984	63590974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63589047_63590402
transcript_80246.known	chr2	+	406	1	FSM	ENSG00000234488.1	ENST00000411843.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGATGCTTTGTTTTGGT	NA	False	NA	NA	False	NA	NA	NA	63684304	63684710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63684300_63684700
transcript_80255.known	chr2	+	2057	11	FSM	ENSG00000169764.16	ENST00000467648.6	2057	11	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	1328.40882637839	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATTGTTTAATCTTAAAA	63829012	True	NA	-95	True	NA	NA	NA	63840968	63891451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63842538_63842600_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_80272.known	chr2	+	1955	10	FSM	ENSG00000169764.16	ENST00000445915.6	1955	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1109.42928270951	1226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTGTGTACACTGGTACTT	63842306	False	NA	15	True	AATAAA	-14	NA	63842324	63891561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842438_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_8028.known	chr1	+	1912	14	FSM	ENSG00000143036.17	ENST00000532427.5	1912	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.95644944080183	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAATAAACCCTATTCTTC	94820618	True	NA	-22	True	TTTAAA	-4	NA	94820649	94895029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_8029.nic	chr1	+	1982	14	NIC	ENSG00000143036.17	novel	2061	14	NA	NA	-20	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_1	6.83360994292702	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	94820555	True	NA	2	True	AATAAA	-16	NA	94820600	94895053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_94820724_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867333_94867418_94891129_94891268_94892280_94892518_94894817
transcript_80295.known	chr2	+	4397	7	FSM	ENSG00000169764.16	ENST00000475550.5	4397	7	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1292.8346117479	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGTACACTGGTACTTT	63840296	False	NA	16	True	AATAAA	-15	NA	63841850	63891562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842205_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63890186_63891119
transcript_80296.known	chr2	+	2150	10	FSM	ENSG00000169764.16	ENST00000337130.10	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1787	junction_1	594.395512004724	9237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63798289	True	NA	14	True	AATAAA	-13	NA	63841895	63891560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63842205_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_80297.known	chr2	+	2105	10	FSM	ENSG00000169764.16	ENST00000394417.7	2105	10	0	0	0	0	multi-exon	FALSE	canonical	3	1234	junction_1	746.636077415742	3572	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTGTGTACACTGGTACT	63829012	True	NA	14	True	AATAAA	-13	NA	63840968	63891560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588_63885887_63886340_63886539_63887401_63887645_63890080_63890186_63891119
transcript_80298.known	chr2	+	1015	5	FSM	ENSG00000169764.16	ENST00000487469.5	1015	5	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	1424.92936228432	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATGGAAATCATTGTGAAT	63829051	True	NA	81	True	NA	NA	NA	63841007	63886512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63841233_63882465_63882652_63883959_63884094_63885588_63885887_63886340
transcript_80299.known	chr2	+	753	6	FSM	ENSG00000169764.16	ENST00000491621.5	753	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	1215.74592740424	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATTTACGCCAGTTTCT	63845723	True	NA	NA	False	AATACA	-27	NA	63846073	63885684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_63846175_63856305_63856434_63857828_63857937_63882465_63882652_63883959_63884094_63885588
transcript_8030.known	chr1	+	2061	14	FSM	ENSG00000143036.17	ENST00000467909.5	2061	14	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	5.42621295032258	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTTTGTCATTATTGTT	94820575	False	NA	2	True	AATAAA	-16	NA	94820620	94895053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820724_94824492_94824636_94827506_94827644_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_80310.known	chr2	+	821	5	FSM	ENSG00000225889.10	ENST00000413030.8	1071	5	0	250	0	7	multi-exon	FALSE	canonical	0	0	junction_3	11.1130553854464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTTTCCTGGCTCATCC	64227927	True	NA	NA	False	NA	NA	NA	64228400	64252609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251338_64251688_64251835_64252419
transcript_80319.nic	chr2	+	1444	4	FSM	ENSG00000225889.10	ENST00000687330.1	1447	4	-3	6	-3	0	multi-exon	FALSE	canonical	2	23	junction_3	2.05480466765633	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	64227899	True	NA	9	True	ATTAAA	-15	NA	64228372	64252853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251835_64252419
transcript_80320.known	chr2	+	1555	4	FSM	ENSG00000225889.10	ENST00000451350.3	1582	4	27	0	1	0	multi-exon	FALSE	canonical	2	22	junction_3	2.44948974278318	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	64227943	True	NA	15	True	ATTAAA	-21	NA	64228416	64252859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64252419
transcript_80321.nnic	chr2	+	1567	4	FSM	ENSG00000225889.10	ENST00000691049.1	1547	4	-20	0	-3	0	multi-exon	FALSE	canonical	2	12	junction_3	6.94422221866655	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	64227899	True	NA	12	True	ATTAAA	-21	NA	64228372	64257610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228523_64229496_64229641_64251118_64251984_64257202
transcript_80324.known	chr2	+	1477	4	FSM	ENSG00000225889.10	ENST00000675635.2	1506	4	2	27	1	0	multi-exon	FALSE	canonical	0	0	junction_1	12.1928941054479	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTAAAAGCTTTATTGCTC	64227952	True	NA	-12	True	NA	NA	NA	64228425	64252832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64228630_64229496_64229641_64251118_64251835_64252419
transcript_80327.nnic	chr2	+	1150	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2518	3891	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_3	17.6823829464998	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTACATAATTTTGGCTGAA	64252708	False	NA	7	True	AATAAA	-21	NA	64252752	64261501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64260866
transcript_80328.nnic	chr2	+	833	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2518	5799	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	19.4307888557196	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAACATTTCTGTGAGCTGTA	64252708	False	NA	NA	False	ATTAAA	-18	NA	64252752	64263409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_80329.nnic	chr2	+	1229	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2518	6195	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	19.4307888557196	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGGGTTGTGTGTTTT	64252708	False	NA	14	True	ACTAAA	-30	NA	64252752	64263805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64260227_64260350_64263091
transcript_80332.nnic	chr2	+	1246	4	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2558	6195	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_3	12.684198393627	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCCTGGGTTGTGTGTTTT	64248080	True	NA	14	True	ACTAAA	-30	NA	64252792	64263805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254922_64255082_64260227_64260350_64263091
transcript_80339.nnic	chr2	+	953	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2518	0	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	20.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	64252708	False	NA	12	True	ATTAAA	-21	NA	64252752	64257610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64257050
transcript_80340.nnic	chr2	+	817	3	NNC	ENSG00000225889.10	novel	1447	4	NA	NA	2518	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_2	4.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	64252708	False	NA	12	True	ATTAAA	-21	NA	64252752	64257610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_64253044_64254979_64255082_64257186
transcript_80350.nnic	chr2	-	1803	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGCATGTGTGTTTGTTTG	-64255813	False	18	3	True	NA	NA	NA	64255848	64209296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64254915
transcript_80352.nnic	chr2	-	1074	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	49	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAAGAAAGAAAGAAA	-64255492	False	NA	NA	False	AAAAAG	-36	NA	64255527	64209704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64254915
transcript_80354.nnic	chr2	-	920	2	Antisense	novelGene_ENSG00000225889.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	29	junction_1	0	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAGAAGAAAAAGAAAGAA	-64255045	True	NA	NA	False	AAAAAG	-4	NA	64255448	64209779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_64210167_64254915
transcript_80360.known	chr2	-	3716	7	FSM	ENSG00000197329.12	ENST00000358912.5	3716	7	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_6	22.2785397486759	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGGCCTTTTCTAAGTTA	-64137685	True	NA	NA	False	AATAAA	-25	NA	64144420	64092651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64095269_64096124_64096314_64096412_64096611_64100397_64100500_64104700_64104831_64108239_64108380_64144080
transcript_80364.known	chr2	+	3856	5	FSM	ENSG00000119862.13	ENST00000238875.10	3856	5	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_1	8.8423695919137	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTCCAGTTTATAACAT	64453589	True	NA	12	True	AATAAA	-17	NA	64454161	64461381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64454582_64455343_64455416_64455588_64455678_64456287_64456466_64458284
transcript_80368.known	chr2	-	1907	1	FSM	ENSG00000260101.1	ENST00000561559.1	1907	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTGTGTGTGTGGCTTTGT	-64524076	True	NA	NA	False	TATAAA	-19	NA	64524093	64522186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64522200_64524100
transcript_80369.known	chr2	+	4040	9	FSM	ENSG00000119844.16	ENST00000238856.8	4040	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	12.5243512806053	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGCCTGGTGTCTTTGTA	NA	False	NA	NA	False	AATAAA	-16	NA	64524304	64593005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64524613_64551442_64553410_64567561_64567714_64569091_64569219_64569622_64569680_64572945_64573069_64579485_64579547_64585421_64585546_64591884
transcript_80375.nic	chr2	+	2559	2	ISM	ENSG00000119844.16	ENST00000498706.5	4674	9	-199	38418	23	-38180	5prime_fragment	FALSE	canonical	3	88	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCCACACTTATTACCTA	64523295	True	NA	NA	False	TATAAA	-28	NA	64524327	64553716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_64524613_64551442
transcript_80376.known	chr2	-	5549	2	FSM	ENSG00000179833.4	ENST00000313349.3	5549	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGAGGCATGCTTGCAGTTT	-64653556	True	NA	-7	True	AATAAA	-15	NA	64653913	64631620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64636876_64653619
transcript_80377.known	chr2	-	318	1	FSM	ENSG00000179833.4	ENST00000608423.1	318	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGTTGGTCTATTATTTCC	-64750884	False	NA	NA	False	ATTAAA	-36	NA	64750895	64750577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_64750600_64750900
transcript_80378.known	chr2	+	627	2	FSM	ENSG00000226756.1	ENST00000439964.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAACTCTGGAAGTACTGTG	64644558	False	NA	NA	False	AATAAA	-19	NA	64644611	64646698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_64644965_64646424
transcript_80391.nnic	chr2	-	715	3	FSM	ENSG00000237638.3	ENST00000685506.1	663	3	-54	2	-23	-2	multi-exon	FALSE	canonical	3	12	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	NA	False	NA	-3	True	GATAAA	-17	NA	65056249	65047891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65048213_65051278_65051338_65055914
transcript_80392.nnic	chr2	-	724	3	NNC	ENSG00000237638.3	novel	671	2	NA	NA	0	-2	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	1	77	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATGTTTTAGAGTAATTT	-65055341	False	NA	-3	True	GATAAA	-17	NA	65056226	65047891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_65048213_65055529_65055621_65055914
transcript_80393.known	chr2	-	608	2	FSM	ENSG00000237638.3	ENST00000666526.2	671	2	63	0	5	0	multi-exon	FALSE	canonical	3	27	junction_1	0	230	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAATTCACTAGGTAAAGG	-65055278	True	NA	35	True	AATAGA	-3	NA	65056163	65047853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65048213_65055914
transcript_80398.known	chr2	+	5803	7	FSM	ENSG00000011523.14	ENST00000377990.7	5803	7	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_4	18.3734409769464	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATTTTTGGCTTGTGTTT	65053787	True	NA	7	True	AATAAA	-16	NA	65056415	65087004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_65056529_65069398_65069802_65071453_65072981_65074281_65074405_65077867_65077965_65082535_65082710_65083638
transcript_804.known	chr1	+	5441	3	FSM	ENSG00000228794.11	ENST00000669922.1	5441	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	29	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTCATGCCACTATATATT	826892	True	NA	NA	False	NA	NA	NA	827602	846365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827776_829002_829105_841199
transcript_8040.known	chr1	+	1943	14	FSM	ENSG00000143036.17	ENST00000527077.5	1943	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	5.95644944080183	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTGTCTTTGTCATTATTGT	94820177	False	NA	1	True	AATAAA	-15	NA	94820396	94895052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94820479_94824492_94824636_94827506_94827548_94828492_94828587_94837710_94837872_94839947_94840038_94841999_94842125_94845277_94845465_94857334_94857501_94864742_94864900_94867330_94867418_94891129_94891268_94892280_94892518_94894817
transcript_80417.known	chr2	-	2448	6	FSM	ENSG00000138069.18	ENST00000409784.8	2448	6	0	0	0	0	multi-exon	FALSE	canonical	3	1323	junction_5	104.763352370951	3222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGGCGTGCTTGGTGGA	-65116451	True	NA	NA	False	AATAAA	-20	NA	65130106	65086853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65097970_65098067_65104733_65104807_65129892
transcript_80418.known	chr2	-	1198	4	FSM	ENSG00000138069.18	ENST00000398529.7	1198	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	633.230342503158	289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116446	True	NA	-12	True	AATAAA	-29	NA	65130101	65087870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65097970_65098067_65104733_65104807_65129892
transcript_80419.known	chr2	-	1333	5	FSM	ENSG00000138069.18	ENST00000409751.1	1333	5	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_3	620.845139708768	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTATGGTGATAAGTATTG	-65116449	True	NA	-12	True	AATAAA	-29	NA	65130104	65087870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65088938_65089071_65090982_65091079_65104733_65104807_65129892
transcript_80420.known	chr2	-	2254	4	FSM	ENSG00000138069.18	ENST00000409892.5	2254	4	0	0	0	0	multi-exon	FALSE	canonical	2	32	junction_2	628.802565728438	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATAGGCGTGCTTGGTGG	-65116450	True	NA	NA	False	AATAAA	-19	NA	65130105	65086854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65088691_65088938_65089071_65104733_65104807_65129892
transcript_80422.known	chr2	+	3783	9	FSM	ENSG00000138071.15	ENST00000260641.10	3783	9	0	0	0	0	multi-exon	FALSE	canonical	3	680	junction_6	50.6155855443756	1243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGAATTTTGTCATTTCTT	65208944	True	NA	22	True	AATAAA	-22	NA	65227830	65271253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_65227958_65239851_65239963_65246523_65246740_65251026_65251100_65253727_65253865_65255544_65255695_65261246_65261393_65265042_65265176_65268563
transcript_8043.known	chr1	-	1991	7	FSM	ENSG00000117519.16	ENST00000370206.9	1991	7	0	0	0	0	multi-exon	FALSE	canonical	3	3021	junction_2	173.54986475234	842	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGAACCACAGGCTGATTA	-94908475	True	NA	-6	True	AATAAA	-20	NA	94927110	94896956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94898084_94899370_94899518_94901668_94901786_94902120_94902259_94903121_94903189_94903402_94903525_94926837
transcript_80434.known	chr2	-	467	2	FSM	ENSG00000198369.10	ENST00000427238.1	467	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAGTGGTATCATACTTT	-65344774	True	NA	NA	False	AATAAA	-28	NA	65344786	65344195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_65344595_65344718
transcript_80438.nnic	chr2	+	987	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64753	7	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTATATTTTGGAGTGT	NA	False	NA	NA	False	AATAAA	-18	NA	65558518	65628431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65559085_65609776_65609929_65628162
transcript_80439.nnic	chr2	+	511	3	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64358	7	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.5	40	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCACTATATTTTGGAGTGT	65558845	True	NA	NA	False	AATAAA	-18	NA	65558913	65628431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65559085_65562377_65562449_65628162
transcript_80440.nnic	chr2	+	784	2	NNC	ENSG00000281920.1	novel	744	3	NA	NA	-64695	14	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGGAGTGTTTTGTTA	NA	False	NA	NA	False	AATAAA	-25	NA	65558576	65628438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_65559085_65628162
transcript_80443.nnic	chr2	-	1342	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63678	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.98159879261791	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAAATGCTGAAATA	NA	False	NA	-39	True	TTTAAA	-2	NA	67334302	67175187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084_67325233_67333984
transcript_80444.nnic	chr2	-	1299	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63678	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	5.20596204522531	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTATAAAAATGCTGAAATA	NA	False	NA	-39	True	TTTAAA	-2	NA	67334302	67175187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325127_67325233_67333984
transcript_80446.nnic	chr2	-	1033	8	NNC	ENSG00000236780.7	novel	1280	10	NA	NA	63678	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	4.98159879261791	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATTTGAAATGATTTGA	NA	False	NA	-14	True	AATAAA	-16	NA	67334302	67175496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67321804_67321845_67324404_67324485_67325084_67325233_67333984
transcript_80449.known	chr2	-	571	5	FSM	ENSG00000236780.7	ENST00000414404.1	571	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6.20483682299543	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAGAACATTGTAATAATTGA	-67215264	True	NA	60	True	TTTAAA	-25	NA	67215277	67175422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_67175700_67177581_67177713_67203115_67203174_67205508_67205564_67215227
transcript_8045.known	chr1	+	1614	4	FSM	ENSG00000235501.7	ENST00000438509.3	1615	4	0	1	0	0	multi-exon	FALSE	canonical	3	11	junction_3	5.31245915016974	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	94926459	True	NA	5	True	AATAAA	-20	NA	94927365	94963270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962924
transcript_80454.known	chr2	+	4948	6	FSM	ENSG00000143971.9	ENST00000272342.6	4948	6	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	25.5076459125494	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	67394895	True	NA	NA	False	NA	NA	NA	67397332	67412089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67403224_67405336_67409910
transcript_80457.nic	chr2	+	1517	6	NIC	ENSG00000143971.9	novel	4948	6	NA	NA	-18	-1688	combination_of_known_junctions	FALSE	canonical	2	2	junction_4	73.2191231851352	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGTTAGTAGAGACTGTTT	67394866	True	NA	12	True	AATAAA	-15	NA	67397303	67410401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67404996_67405336_67409910
transcript_80458.known	chr2	+	2946	6	FSM	ENSG00000143971.9	ENST00000644028.1	2946	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	73.9713458036286	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTTGTATAAATCTTATTTT	67394886	True	NA	NA	False	NA	NA	NA	67397323	67412089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_67397672_67399168_67399298_67399549_67399627_67402861_67402975_67405235_67405336_67409910
transcript_8046.known	chr1	+	1514	4	FSM	ENSG00000235501.7	ENST00000659935.1	1514	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	6.12825877028341	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTGTTACTATGTGCTT	94926505	True	NA	5	True	AATAAA	-20	NA	94927411	94963270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94928403_94931871_94931986_94961316_94961434_94962978
transcript_80465.known	chr2	-	772	6	FSM	ENSG00000197223.12	ENST00000409302.1	772	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	241.439019216033	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTATAATTTACCATCTCT	-68055060	True	NA	NA	False	NA	NA	NA	68063009	68042676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68043054_68045987_68046044_68046343_68046411_68047172_68047316_68053060_68053138_68062957
transcript_80472.known	chr2	-	842	4	FSM	ENSG00000197223.12	ENST00000485709.1	842	4	0	0	0	0	multi-exon	TRUE	canonical	3	143	junction_3	166.097026530345	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGCAAAATAATTCTGTGG	-68055045	True	NA	57	True	AAAAAG	-25	NA	68062994	68042831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68043054_68045987_68046411_68047172_68047320_68062944
transcript_80476.nic	chr2	-	1825	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-64	830	-42	-830	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTCCCTGAAGTTC	NA	False	NA	-10	True	ATTAAA	-15	NA	68157591	68130634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_80477.nic	chr2	-	1539	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	-64	1116	-42	839	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGACTTTGGACTTGA	NA	False	NA	NA	False	NA	NA	NA	68157591	68130920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_80478.known	chr2	-	2306	15	FSM	ENSG00000273398.6	ENST00000406334.3	2306	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	60.2276717878052	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCAAGACTTTGGACTTGA	NA	False	NA	NA	False	AATAAA	-7	NA	68261230	68131237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260_68157695_68157795_68158123_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252987_68253138_68261188
transcript_8048.known	chr1	+	1418	3	FSM	ENSG00000235501.7	ENST00000659966.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	11.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTTAATAAAGCTTTTTAT	94926454	True	NA	-25	True	AAGAAA	-8	NA	94927360	94963240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_94928403_94931871_94931986_94962978
transcript_80481.known	chr2	-	2591	8	FSM	ENSG00000243667.7	ENST00000295121.11	2591	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	13.3889994444114	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-68154914	True	NA	-32	True	AATAAA	-19	NA	68157527	68129804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_80482.nic	chr2	-	2510	8	ISM	ENSG00000243667.7	ENST00000492039.6	1280	10	-13	6869	-10	0	5prime_fragment	FALSE	canonical	1	3	junction_7	48.090475954715	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGCTTTATAAATGCTTA	-68154946	True	NA	-32	True	AATAAA	-19	NA	68157559	68129804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_68131446_68134701_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157373
transcript_80486.known	chr2	-	1517	7	FSM	ENSG00000243667.7	ENST00000409164.1	1517	7	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	8.73212459828649	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGAGTTAATGGTATTTC	-68154869	True	NA	NA	False	ATTAAA	-14	NA	68157482	68134089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157260
transcript_80487.known	chr2	-	1401	7	FSM	ENSG00000243667.7	ENST00000406245.6	1401	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	51.8480686450539	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAATGGTATTTCTGAATA	-68154860	True	NA	NA	False	ATTAAA	-20	NA	68157473	68134083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68134800_68137298_68137434_68138741_68138858_68141693_68141796_68144584_68144716_68147466_68147568_68157373
transcript_80492.known	chr2	+	2242	7	FSM	ENSG00000115946.8	ENST00000263657.7	2242	7	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_2	48.5549516870662	529	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTATGCATCTCTAAAACC	68150202	True	NA	7	True	ATTAAA	-18	NA	68157887	68176238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_68158142_68158379_68158530_68161682_68161767_68162264_68162326_68162545_68162664_68173346_68173418_68174734
transcript_805.known	chr1	+	987	3	FSM	ENSG00000228794.11	ENST00000668541.1	987	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGATGGCCTCTGTTGTTT	827060	False	NA	NA	False	TTTAAA	-16	NA	827770	842001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827854_829002_829105_841199
transcript_80507.known	chr2	-	3024	6	FSM	ENSG00000221823.11	ENST00000234310.8	3024	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	5.60713830755047	208	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGAATGTATTCAGTGGTC	-68239533	True	NA	-13	True	AATAAA	-15	NA	68252532	68178856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68181011_68186467_68186653_68187254_68187315_68188513_68188691_68217091_68217132_68252124
transcript_80508.known	chr2	+	979	1	FSM	ENSG00000273064.1	ENST00000608069.1	979	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAAATGGTTCCTGTCTCTC	68252743	True	NA	NA	False	AATAAA	-23	NA	68252869	68253848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_68252900_68253800
transcript_80509.known	chr2	-	644	3	FSM	ENSG00000119865.9	ENST00000409559.7	644	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAAGGGTTTACTCACTGT	-68319266	False	NA	NA	False	ATTAAA	-16	NA	68319400	68284170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68284485_68317156_68317308_68319221
transcript_80510.known	chr2	-	1896	3	FSM	ENSG00000119865.9	ENST00000263655.4	1896	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCCTGACTTGCATTCTTA	NA	False	NA	-1	True	AATAAA	-15	NA	68319949	68293009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68294027_68317156_68317308_68319221
transcript_80511.known	chr2	-	5699	4	FSM	ENSG00000204923.4	ENST00000377957.4	5699	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	3.55902608401044	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTTATTATTTTGAATTA	-68466928	True	NA	0	True	AATAAA	-17	NA	68467294	68459421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_68464371_68464839_68465179_68466143_68466471_68467210
transcript_80517.nic	chr2	-	355	2	ISM	ENSG00000204923.4	ENST00000377957.4	5699	4	-39	6817	-39	-6817	5prime_fragment	FALSE	canonical	3	7	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAAGCTGTCTTTATATAC	NA	False	NA	NA	False	AATAAA	-16	NA	68467333	68466238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_68466471_68467210
transcript_80519.known	chr2	+	3823	10	FSM	ENSG00000169621.10	ENST00000303795.9	3823	10	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	6.42910050732864	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAAGTGTAATGAAAATGA	68466624	True	NA	NA	False	AATAAA	-17	NA	68467584	68580162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_68467828_68490189_68490262_68502730_68502904_68513079_68513228_68513547_68513681_68526060_68526243_68537871_68538228_68545186_68545313_68567340_68567388_68577819
transcript_80520.nnic	chr2	+	747	3	NNC	ENSG00000169621.10	novel	3823	10	NA	NA	-45	-78153	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	12	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTCATCTCTGTTTTA	68466566	True	NA	NA	False	AATAAA	-17	NA	68467526	68501104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_68467828_68490189_68490262_68500730
transcript_80523.nnic	chr2	+	1246	2	NNC	ENSG00000163219.12	novel	1227	8	NA	NA	-18	-81296	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	40	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTAGTTAAATTGTTTG	68679446	True	NA	NA	False	ATTAAA	-19	NA	68679582	68693842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_68679730_68692743
transcript_80524.nnic	chr2	+	1591	2	NNC	ENSG00000163219.12	novel	582	4	NA	NA	0	-81299	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTCTTAGTTAAATTGT	68679464	True	NA	NA	False	ATTAAA	-16	NA	68679600	68693839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_68680096_68692743
transcript_80525.nnic	chr2	+	1294	13	NNC	ENSG00000169604.21	novel	2221	13	NA	NA	-3	-4863	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_12	28.8468176561798	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTTCTCCTGATTT	69007010	True	NA	NA	False	AATAAA	-10	NA	69013353	69130306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69130109
transcript_80526.known	chr2	+	1126	13	FSM	ENSG00000169604.21	ENST00000482235.2	1126	13	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_12	28.8468176561798	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTGGATGATTTGTGCT	69007156	False	NA	NA	False	TATAAA	-17	NA	69013499	69135169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69134994
transcript_80527.known	chr2	+	1989	13	FSM	ENSG00000169604.21	ENST00000681816.1	1989	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	29.9021552549125	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCCCACCACTTGCTGTTAA	69007096	False	NA	-47	True	NA	NA	NA	69013439	69146305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69145327
transcript_8053.known	chr1	-	9375	4	FSM	ENSG00000172339.10	ENST00000370205.6	9375	4	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	10.077477638554	302	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGTGTTACATATATGA	-95072068	True	NA	NA	False	AATAAA	-20	NA	95072951	94974404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_94983307_95027128_95027261_95064865_95065018_95072762
transcript_80530.known	chr2	+	1449	10	FSM	ENSG00000169604.21	ENST00000463335.2	1449	10	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_8	8.09663853432741	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTAGATTCTGCAGCTTT	69007013	True	NA	18	True	AATAAA	-27	NA	69013356	69103444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841
transcript_80531.nic	chr2	+	1689	9	ISM	ENSG00000169604.21	ENST00000463335.2	1449	10	-301	11983	-120	363	5prime_fragment	FALSE	canonical	3	96	junction_8	8.57959060794861	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAAAGTTATCTTCTT	69013028	True	NA	NA	False	NA	NA	NA	69013055	69091461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858
transcript_80533.known	chr2	+	5858	18	FSM	ENSG00000169604.21	ENST00000303714.9	5858	18	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_15	31.9622398321286	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTTTCTGGTTATTTG	69013132	True	NA	14	True	AATAAA	-14	NA	69013178	69249327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69152168_69152265_69170247_69170290_69181785_69181882_69182492_69182661_69193334_69193416_69245224
transcript_80534.known	chr2	+	1384	15	FSM	ENSG00000169604.21	ENST00000409349.7	1384	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_14	31.7233738587117	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTCTCTGCCGTATATATG	69007053	True	NA	NA	False	AATAAA	-19	NA	69013396	69172558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69013652_69040043_69040116_69044741_69044814_69070646_69070729_69071753_69071788_69073021_69073102_69075589_69075659_69077407_69077489_69090858_69090920_69102841_69102941_69123016_69123087_69124564_69124644_69152168_69152265_69170247_69170290_69172366
transcript_80539.known	chr2	-	1034	8	FSM	ENSG00000169599.13	ENST00000303698.7	1034	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	137.932399887682	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTTGCTTTACC	-69433827	True	NA	-23	True	AATAAA	-29	NA	69437475	69396119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437270
transcript_80546.known	chr2	-	1058	7	FSM	ENSG00000169599.13	ENST00000394305.5	1058	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_6	187.333629893004	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGCTTTACCTCATATG	-69437614	False	NA	-16	True	AATAAA	-36	NA	69437628	69396112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437270
transcript_80552.known	chr2	-	898	8	FSM	ENSG00000169599.13	ENST00000410022.7	898	8	0	0	0	0	multi-exon	FALSE	canonical	3	367	junction_5	20.457023144103	2444	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAATATTGCATGTTTGC	-69433787	True	NA	-29	True	AATAAA	-23	NA	69437435	69396125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69400363_69400539_69406021_69406083_69415184_69415300_69419537_69419605_69423581_69423718_69431901_69432006_69437360
transcript_80553.known	chr2	-	598	6	FSM	ENSG00000169599.13	ENST00000471185.5	598	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	180.835394765516	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTTGCTTTACCTCATA	-69433787	True	NA	-18	True	AATAAA	-34	NA	69437435	69396114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69396291_69406021_69406083_69415184_69415300_69419537_69419605_69431901_69432006_69437360
transcript_80557.known	chr2	-	453	2	FSM	ENSG00000115977.21	ENST00000492192.1	453	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAATCTAGAAACCATC	-69643802	False	NA	NA	False	AAGAAA	-37	NA	69643845	69643092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69643275_69643574
transcript_80558.known	chr2	-	577	2	FSM	ENSG00000115977.21	ENST00000471775.1	577	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACAGTGGACGAGGTGTT	-69643907	True	NA	NA	False	NA	NA	NA	69643950	69642905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69643275_69643742
transcript_80559.known	chr2	-	567	2	FSM	ENSG00000115977.21	ENST00000495239.1	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACGGTGGGGCTCAATGCGC	NA	False	NA	NA	False	NA	NA	NA	69643960	69642876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69643275_69643791
transcript_80562.known	chr2	+	1414	13	FSM	ENSG00000196975.16	ENST00000409920.5	1414	13	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	22.1001508290479	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTACTTTCTACTTTGTGT	69741916	True	NA	26	True	AATAAA	-23	NA	69741973	69825781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806433_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_80565.known	chr2	+	2651	13	FSM	ENSG00000196975.16	ENST00000394295.6	2651	13	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_5	10.9807280673409	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTGGGAATACTTGCCTTT	69741877	True	NA	NA	False	ATTAAA	-35	NA	69742133	69827112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69742176_69781519_69781575_69788053_69788142_69804532_69804628_69806384_69806499_69807905_69807997_69810593_69810674_69812652_69812710_69816100_69816195_69818598_69818695_69819279_69819339_69820698_69820822_69825455
transcript_80574.known	chr2	+	4161	14	FSM	ENSG00000087338.5	ENST00000282570.4	4161	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_8	30.588701166497	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGTGAAAGCTTTGTG	69823095	True	NA	29	True	AATAAA	-37	NA	69829659	69881384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69830153_69837546_69837671_69839456_69839554_69840941_69841040_69843148_69843262_69844130_69844197_69847542_69847628_69849651_69849743_69854822_69854961_69861277_69861348_69864899_69864976_69869718_69869865_69871744_69871833_69878908
transcript_80583.known	chr2	+	1425	6	FSM	ENSG00000124380.11	ENST00000244227.8	1425	6	0	0	0	0	multi-exon	FALSE	canonical	3	402	junction_1	31.9724881734281	1553	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTTGTATGTTTCATTA	69880532	True	NA	24	True	ATTAAA	-33	NA	69893955	69905236	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253
transcript_80584.known	chr2	+	766	7	FSM	ENSG00000124380.11	ENST00000450162.6	766	7	0	0	0	0	multi-exon	TRUE	canonical	3	53	junction_6	151.316445460058	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTGATAAATATTTTTAT	69880540	True	NA	6	True	AATAAA	-21	NA	69893963	69904671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69903180_69903246_69904253_69904426_69904511
transcript_80585.known	chr2	+	1339	5	FSM	ENSG00000124380.11	ENST00000409116.5	1339	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	188.077610310212	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCCATTACATACATA	69880535	True	NA	6	True	ATTAAA	-15	NA	69893958	69905218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_69894019_69895093_69895215_69896435_69896549_69897376_69897457_69904253
transcript_806.known	chr1	-	1317	1	FSM	ENSG00000225880.5	ENST00000473798.1	1317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	55	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCAAAGCTCACCTTTTA	-827084	True	NA	-12	True	AATAAA	-14	NA	827522	826205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_826200_827500
transcript_80620.known	chr2	-	2393	5	FSM	ENSG00000179818.16	ENST00000425601.6	2393	5	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_2	8.6421930087218	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTGGAGTTTGCATCTAT	-70086264	False	NA	NA	False	ATTAAA	-9	NA	70086285	70030004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70031932_70032132_70032256_70051202_70051306_70085546_70085625_70086123
transcript_80648.nic	chr2	-	614	4	FSM	ENSG00000179818.16	ENST00000690924.1	605	4	-9	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	8.52447456836295	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGTGGTAATTTGT	-70086264	False	NA	-3	True	AATAAA	-20	NA	70086285	70048686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70048958_70051202_70051306_70085546_70085625_70086123
transcript_8065.nic	chr1	+	1479	6	NIC	ENSG00000122481.17	novel	1294	5	NA	NA	-55	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_2	79.489370358558	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231855	True	NA	4	True	ATTAAA	-16	NA	95234154	95247223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_95234316_95237347_95237461_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_80650.nic	chr2	-	512	4	NIC	ENSG00000179818.16	novel	605	4	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_3	9.93310961716756	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGTTTGTGGTAATTTGT	-70087016	False	NA	-3	True	AATAAA	-20	NA	70087037	70048686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_70048958_70051202_70051306_70085546_70085625_70086977
transcript_80655.known	chr2	-	1958	4	FSM	ENSG00000179818.16	ENST00000667307.1	1958	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	13.5236418500672	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGAGGGAGCATGGCCC	-70087229	True	NA	-94	True	NA	NA	NA	70087374	70048777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050253_70051202_70051306_70085546_70085625_70087072
transcript_80656.known	chr2	-	1527	4	FSM	ENSG00000179818.16	ENST00000669812.1	1527	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	12.0277457017791	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACCCTAAAACTTAAAGTATA	-70086252	False	936	NA	False	NA	NA	NA	70086273	70049072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050269_70051202_70051306_70085546_70085625_70086123
transcript_80657.known	chr2	-	1388	4	FSM	ENSG00000179818.16	ENST00000660404.2	1397	4	9	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	9.7410927974683	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCACATGTACCCTAAAACTT	-70086076	True	NA	NA	False	NA	NA	NA	70087012	70049080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70050253_70051202_70051306_70085546_70085625_70086977
transcript_80663.known	chr2	-	1543	1	FSM	ENSG00000244617.3	ENST00000320256.6	1543	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATGTAATGTGTTGATTGA	NA	False	NA	5	True	AATAAA	-19	NA	69961631	69960088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_69960100_69961600
transcript_80664.known	chr2	+	1727	1	FSM	ENSG00000169564.7	ENST00000303577.7	1727	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2976	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTTTGTTGGTGCCTTTTT	70070363	True	NA	60	True	AAAAAG	-21	NA	70087476	70089203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70087500_70089200
transcript_80665.known	chr2	-	662	2	FSM	ENSG00000231327.2	ENST00000414141.2	679	2	15	2	15	0	multi-exon	FALSE	canonical	3	36	junction_1	0	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATTGTCATACTTCTTT	-70124791	True	NA	-4	True	AAAAAG	-18	NA	70125317	70124035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70124426_70125045
transcript_80669.known	chr2	-	2524	10	FSM	ENSG00000115998.8	ENST00000264434.7	2524	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_9	9.19473816247876	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATATCTCATGGTTGCCTG	-70190483	True	NA	NA	False	AATAAA	-24	NA	70191019	70149884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70150565_70160624_70160788_70165091_70165193_70165527_70165636_70169556_70169662_70175672_70175778_70179531_70179643_70181162_70181998_70182666_70182936_70190972
transcript_80684.known	chr2	-	3823	13	FSM	ENSG00000116001.17	ENST00000282574.8	3823	13	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_2	122.470971617314	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGGGATCTTCTTGCAG	-70238442	True	NA	-22	True	ATTAAA	-22	NA	70248580	70210203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70212846_70214348_70214492_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_80685.known	chr2	-	4633	12	FSM	ENSG00000116001.17	ENST00000415783.6	4633	12	0	0	0	0	multi-exon	TRUE	canonical	3	58	junction_8	128.373100346459	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTTTTTCTACCTTCATT	-70248638	False	NA	1	True	AATAAA	-25	NA	70248660	70209443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70212846_70214348_70214495_70215370_70215495_70216207_70216293_70216403_70216500_70216885_70216995_70224553_70224630_70227734_70227823_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_80686.known	chr2	-	904	8	FSM	ENSG00000116001.17	ENST00000477044.6	904	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	186.769092404367	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTCTGTTTTGTCTGTT	-70238473	True	NA	-3	True	AATAAA	-15	NA	70248611	70224423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70224630_70227734_70227823_70228343_70228463_70229058_70229092_70229263_70229319_70230755_70230855_70236078_70236176_70248404
transcript_80687.known	chr2	+	5339	6	FSM	ENSG00000116005.12	ENST00000433351.7	5339	6	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_3	22.0581050863396	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTCTTTTGCTTCTG	70250803	True	NA	16	True	AATAAA	-15	NA	70258136	70281185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70258277_70259359_70259567_70261211_70261387_70274958_70275171_70275513_70275667_70276733
transcript_80689.known	chr2	+	556	4	FSM	ENSG00000116005.12	ENST00000422380.5	556	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	130.233977474732	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCTGAGAAGTTCCTCA	NA	False	NA	NA	False	NA	NA	NA	70257385	70275084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_70257434_70259359_70259567_70261211_70261387_70274958
transcript_80691.nic	chr2	+	534	3	ISM	ENSG00000116005.12	ENST00000264441.9	2959	6	-80	17773	-68	-13754	5prime_fragment	FALSE	canonical	3	276	junction_1	13	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCAATCCCTCCGTATGCA	70250735	True	NA	NA	False	ATTAAA	-19	NA	70258068	70261330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_70258277_70259359_70259567_70261211
transcript_80692.nic	chr2	+	659	3	ISM	ENSG00000116005.12	ENST00000264441.9	2959	6	-80	17648	-68	-13629	5prime_fragment	FALSE	canonical	3	276	junction_1	13	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAATTATGATTTCTTGTAA	70250735	True	NA	NA	False	ATTAAA	-15	NA	70258068	70261455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_70258277_70259359_70259567_70261211
transcript_80693.nic	chr2	+	545	2	ISM	ENSG00000116005.12	ENST00000264441.9	2959	6	-80	19407	-68	-15388	5prime_fragment	FALSE	canonical	3	276	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTTGTTAGTTGGTACT	70250735	True	NA	NA	False	NA	NA	NA	70258068	70259696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_70258277_70259359
transcript_807.known	chr1	+	1558	6	FSM	ENSG00000228794.11	ENST00000657175.1	1558	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.5815451315007	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGTGAGGTACAATAGCTA	827095	False	NA	9	True	AATAAA	-12	NA	827805	854385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_827850_829002_829105_847653_847807_851926_852095_852670_852767_853390
transcript_8070.known	chr1	+	796	5	FSM	ENSG00000122481.17	ENST00000497058.5	796	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	89.7534818266122	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231925	True	NA	4	True	ATTAAA	-16	NA	95234224	95247223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95239776_95239811_95244564_95244652_95246541_95246658_95246755
transcript_80700.known	chr2	-	428	4	FSM	ENSG00000143977.14	ENST00000449935.6	428	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	3660.43169888774	2091	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	-70292766	False	NA	-77	True	AATAAA	-17	NA	70292776	70281506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70292674
transcript_80704.known	chr2	-	398	4	FSM	ENSG00000143977.14	ENST00000413456.6	398	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3661.64483379927	2092	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	-70293214	False	NA	-77	True	AATAAA	-17	NA	70293224	70281506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293152
transcript_80709.known	chr2	-	594	4	FSM	ENSG00000143977.14	ENST00000272348.7	594	4	0	0	0	0	multi-exon	FALSE	canonical	3	4359	junction_2	2135.76699727912	44969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGTCCATCATCTT	-70249324	True	NA	-3	True	ATTAAA	-38	NA	70293740	70281361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70293617
transcript_80710.known	chr2	-	566	3	FSM	ENSG00000143977.14	ENST00000429728.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_2	4291	5047	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGGATTCCTTCTGTCCATC	-70249324	True	NA	-8	True	ATTAAA	-33	NA	70293740	70281366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70293617
transcript_80711.known	chr2	-	515	5	FSM	ENSG00000143977.14	ENST00000438261.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3708.89716593761	3220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCTTTCTCAGATGTTCTG	-70293438	False	NA	-75	True	AATAAA	-19	NA	70293448	70281504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70288067_70288193_70289349_70289373_70291280_70291310_70293290
transcript_80712.known	chr2	-	527	5	FSM	ENSG00000143977.14	ENST00000454893.1	527	5	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_2	2158.96786682896	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGCTTTCTCAGATGTTC	-70249295	True	NA	-77	True	AATAAA	-17	NA	70293711	70281506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70281685_70287264_70287372_70288067_70288193_70289349_70289373_70293617
transcript_80713.known	chr2	-	936	4	FSM	ENSG00000035141.8	ENST00000450256.1	936	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	898.743938319846	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCCCTGTAACAAGCCAGA	-70278681	True	NA	NA	False	NA	NA	NA	70302056	70297010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301407_70301604_70301924
transcript_80724.known	chr2	-	518	3	FSM	ENSG00000035141.8	ENST00000438759.1	518	3	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_2	963.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGATGCTGGGAGTAAGGAG	-70278619	True	NA	-98	True	NA	NA	NA	70301994	70297425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301669
transcript_80725.known	chr2	-	1810	3	FSM	ENSG00000035141.8	ENST00000037869.7	1810	3	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_2	18.5	5072	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGAGTCTTCTTTCCTTA	-70278715	True	NA	-2	True	AATAAA	-23	NA	70302090	70295974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301924
transcript_80726.known	chr2	-	2398	3	FSM	ENSG00000035141.8	ENST00000460307.1	2398	3	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_2	930.5	768	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-70278681	True	NA	-3	True	AATAAA	-22	NA	70302056	70295975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70301604_70301924
transcript_80727.known	chr2	-	2107	3	FSM	ENSG00000035141.8	ENST00000430566.6	2107	3	0	0	0	0	multi-exon	TRUE	canonical	2	26	junction_2	963.5	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGAGTCTTCTTTCCTT	-70278692	True	NA	-3	True	AATAAA	-22	NA	70302067	70295975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70297478_70300839_70300981_70301603
transcript_80729.known	chr2	-	561	2	FSM	ENSG00000035141.8	ENST00000498665.1	561	2	0	0	0	0	multi-exon	FALSE	canonical	3	1916	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TAAAATACAAAAAATTAGCC	-70278637	True	NA	NA	False	NA	NA	NA	70302012	70300507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70300981_70301924
transcript_8073.known	chr1	+	1294	5	FSM	ENSG00000122481.17	ENST00000495272.5	1294	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	71.9461604256961	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGATTTGTTTTCATG	95231921	True	NA	-2	True	ATTAAA	-10	NA	95234220	95247217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95239776_95239910_95244210_95244699_95246541_95246658_95246755
transcript_80730.known	chr2	-	1225	6	FSM	ENSG00000163235.16	ENST00000418333.6	1225	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.92574776766556	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTAATGATGTATGTGTTG	-70553809	False	37	NA	False	TATAAA	-18	NA	70553826	70450172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465734_70514858_70514913_70553727
transcript_80731.known	chr2	-	4117	6	FSM	ENSG00000163235.16	ENST00000295400.11	4117	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	2.24499443206436	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAAGACTGGAGTGTTTCTT	-70553809	False	37	-2	True	AATGAA	-16	NA	70553826	70447283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70450867_70453217_70453328_70456338_70456489_70465615_70465737_70514858_70514913_70553727
transcript_80733.nic	chr2	-	761	2	ISM	ENSG00000163235.16	ENST00000394241.3	568	4	-31	58090	-31	430	5prime_fragment	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATCGGTATTTTTTTTT	-70553987	False	NA	NA	False	AGTAAA	-9	NA	70554004	70514428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_70514913_70553727
transcript_80734.known	chr2	-	2654	17	FSM	ENSG00000075340.23	ENST00000355733.7	2654	17	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	74.6497812706106	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGAACCCCCTCCTTCC	-70759808	True	NA	-50	True	AAAAAG	-3	NA	70768177	70663482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70663736_70672877_70673007_70673240_70673327_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_80737.known	chr2	-	9290	16	FSM	ENSG00000075340.23	ENST00000264436.9	9290	16	0	0	0	0	multi-exon	TRUE	canonical	3	188	junction_13	23.2828024277338	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTGCCCCATCTCTG	-70759831	True	NA	-3	True	AGTAAA	-22	NA	70768200	70656783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70663736_70672877_70673007_70674677_70674826_70676795_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_80739.known	chr2	-	3776	13	FSM	ENSG00000075340.23	ENST00000413157.6	3776	13	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_10	21.704294249961	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCGGGAGCATCCTTTGA	-70759843	True	NA	-24	True	AATAAA	-16	NA	70768212	70675092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70676886_70677757_70677878_70678703_70678962_70683590_70683768_70688023_70688123_70690785_70690930_70692402_70692553_70695720_70695802_70696244_70696397_70704320_70704460_70706225_70706443_70713065_70713185_70767885
transcript_80750.nic	chr2	+	1222	10	NIC	ENSG00000124357.13	novel	1801	10	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_1	73.6987528581014	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGGACTGCATTATCAAACA	NA	False	NA	14	True	AATAAA	-22	NA	71068253	71078641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_71068337_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_80752.known	chr2	+	2371	10	FSM	ENSG00000124357.13	ENST00000244204.11	2371	10	0	0	0	0	multi-exon	FALSE	canonical	3	204	junction_1	21.5910360915398	888	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTTTGTCTACTCCCCTC	71066590	True	NA	NA	False	AATAAA	-15	NA	71068647	71079808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71070501_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_80765.known	chr2	+	2343	9	FSM	ENSG00000124357.13	ENST00000418807.7	2343	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	79.9277017059793	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGTTTTTGTCTACTCCC	71066530	True	NA	NA	False	AATAAA	-12	NA	71068587	71079805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_80785.known	chr2	+	878	7	FSM	ENSG00000124357.13	ENST00000443872.6	878	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	91.4392633877203	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCTTTTTACAAAAACAAAC	71066534	True	NA	-42	True	NA	NA	NA	71068591	71078585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71068713_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_80793.known	chr2	-	3365	6	FSM	ENSG00000144043.12	ENST00000272438.9	3365	6	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	12.8840987267251	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAATTGTAGTGATGTGTAC	-70993329	True	NA	NA	False	AATAAA	-16	NA	70994873	70985941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70991829_70991984_70993695_70993776_70994687
transcript_8080.known	chr1	+	1180	4	FSM	ENSG00000122481.17	ENST00000370202.5	1180	4	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_2	54.1869192907497	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTCATGTTTGCTTT	95231910	True	NA	6	True	ATTAAA	-18	NA	95234209	95247225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95244210_95244699_95246541_95246658_95246755
transcript_80801.known	chr2	-	758	5	FSM	ENSG00000144043.12	ENST00000433258.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_3	53.6860084193265	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCTCAGTCCTCCCCTGT	-70993288	True	NA	NA	False	NA	NA	NA	70994832	70988353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_70988716_70988914_70989018_70989748_70989817_70993695_70993776_70994687
transcript_80806.known	chr2	+	2986	9	FSM	ENSG00000124357.13	ENST00000475709.5	2986	9	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_2	18.9670767383907	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAATTGGACTGCATTATC	71066592	True	NA	9	True	AATAAA	-17	NA	71068649	71078636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71070587_71070740_71070840_71071685_71071828_71072640_71072752_71073481_71073595_71075554_71075643_71076603_71076702_71077557_71077637_71078317
transcript_80833.nic	chr2	-	737	3	NIC	ENSG00000124370.11	novel	824	3	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	47.5	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGGGTAATTGAATGTAATG	-71130270	False	NA	-6	True	AATAAA	-18	NA	71130301	71109683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_71110123_71124367_71124544_71130179
transcript_80835.known	chr2	-	824	3	FSM	ENSG00000124370.11	ENST00000244217.6	824	3	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	22	871	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATGGGGTAATTGAATGTA	-71127643	True	NA	-9	True	AATAAA	-15	NA	71130229	71109686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71110123_71124205_71124544_71130179
transcript_80847.known	chr2	-	836	2	FSM	ENSG00000124370.11	ENST00000494660.6	836	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTTAATTATTTTAATG	-71127628	True	NA	NA	False	AAAACA	-33	NA	71130214	71124205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71124544_71129716
transcript_80849.known	chr2	+	2164	11	FSM	ENSG00000124383.9	ENST00000244230.7	2164	11	0	0	0	0	multi-exon	FALSE	canonical	3	298	junction_7	19.3277003288027	741	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTGCATCGATGACAGATA	71125623	True	NA	16	True	AATAAA	-17	NA	71130633	71150101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489_71138632_71139794_71139863_71141231_71141370_71144427_71144539_71147998_71148107_71149222_71149454_71149865
transcript_80850.known	chr2	+	2068	5	FSM	ENSG00000124383.9	ENST00000498451.2	2068	5	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	12.1526746027366	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTCATCTCATTGACT	71125621	True	NA	NA	False	ATTAAA	-21	NA	71130631	71139425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71130755_71132897_71133577_71133947_71134106_71134625_71134798_71138489
transcript_80854.known	chr2	-	6300	4	FSM	ENSG00000124374.9	ENST00000244221.9	6300	4	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_1	18.3847763108502	1640	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTGGCAGTGGTACCCT	-71220458	True	NA	-15	True	AATAAA	-13	NA	71227103	71182737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71188536_71189844_71190022_71202451_71202601_71226927
transcript_80862.known	chr2	+	6487	28	FSM	ENSG00000075292.19	ENST00000264447.9	6487	28	0	0	0	0	multi-exon	TRUE	canonical	3	119	junction_1	105.612356387278	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTGTGGCTGATTT	71320315	True	NA	NA	False	AATAAA	-28	NA	71331781	71435061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71331876_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71396140_71396192_71398700_71398773_71399558_71399646_71400111_71400181_71400477_71400519_71401955_71402088_71403869_71403999_71405600_71405643_71406127_71406263_71408121_71408248_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_80886.nnic	chr2	+	3164	9	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	176.332073089384	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417244_71418601_71418640_71422813_71424039_71424649_71424716_71426459_71427415_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_8089.known	chr1	+	1078	3	FSM	ENSG00000122481.17	ENST00000263893.10	1078	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	64	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231911	True	NA	4	True	ATTAAA	-16	NA	95234210	95247223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95244210_95244716_95246755
transcript_80895.nnic	chr2	+	874	6	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1256	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	278.688069353534	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71416965	71435058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417159_71418601_71418640_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_80896.nnic	chr2	+	918	6	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	30	junction_2	270.080432464109	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417244_71418601_71418640_71428546_71428652_71431326_71431429_71433164_71433284_71434741
transcript_809.nnic	chr1	+	626	2	NNC	ENSG00000272438.1	novel	351	2	NA	NA	-41	-10225	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTTAACGTCATT	904683	True	NA	NA	False	NA	NA	NA	904792	905751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_904962_905294
transcript_80900.nnic	chr2	+	813	5	NNC	ENSG00000075292.19	novel	2076	7	NA	NA	-1215	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_2	291.537626216583	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATCTGTGTTTGTGGCTGA	NA	False	NA	NA	False	AATAAA	-25	NA	71417006	71435058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71417244_71418601_71418640_71431326_71431429_71433164_71433284_71434741
transcript_80903.nic	chr2	+	622	4	ISM	ENSG00000075292.19	ENST00000475743.1	590	5	0	1144	0	-1118	5prime_fragment	FALSE	canonical	2	36	junction_1	186.507074634956	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGACCCACATGCCACAGA	71320295	True	NA	NA	False	ATTAAA	-22	NA	71331761	71364370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_71331866_71355718_71355781_71363152_71363192_71363953
transcript_80908.known	chr2	+	3518	13	FSM	ENSG00000075292.19	ENST00000410075.5	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_10	167.139392092017	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGCGGCTCCAGCTTATC	71273461	True	NA	6	True	AATAAA	-2	NA	71276592	71395670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71276755_71348752_71350272_71355718_71355781_71363152_71363192_71363953_71364253_71365428_71365707_71368381_71368529_71369882_71370006_71380221_71380281_71380512_71380566_71388622_71388724_71393393_71393646_71395246
transcript_80909.nic	chr2	+	1246	2	ISM	ENSG00000075292.19	ENST00000464375.5	626	5	-54	8744	-22	7249	5prime_fragment	FALSE	canonical	3	35	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTTTTTTTAAGTAAGA	71320239	True	NA	NA	False	NA	NA	NA	71331705	71356794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_71331876_71355718
transcript_80910.known	chr2	+	931	2	FSM	ENSG00000075292.19	ENST00000437658.2	931	2	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTTGGTAGTGAAGCAGT	71320261	True	NA	NA	False	AATAAA	-4	NA	71331727	71349545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71331866_71348752
transcript_80911.known	chr2	+	626	5	FSM	ENSG00000075292.19	ENST00000464375.5	626	5	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	163.545674048567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCTAAAACTAGCAGTGGAAC	71320293	True	NA	NA	False	NA	NA	NA	71331759	71365538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_71331876_71355718_71355781_71363152_71363192_71363953_71364253_71365428
transcript_80912.nnic	chr2	+	793	4	NNC	ENSG00000135636.15	novel	6952	55	NA	NA	-26	-82690	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	22.69116323349	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGTTTAATTGCTCT	71453659	False	NA	NA	False	AATAAA	-19	NA	71453695	71488226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_71454087_71480882_71480939_71481878_71481971_71487972
transcript_80913.known	chr2	-	253	1	FSM	ENSG00000233971.1	ENST00000451209.1	253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTAAGTCAACTATTTTAAT	NA	False	NA	NA	False	NA	NA	NA	71984434	71984181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_71984200_71984400
transcript_80914.nic	chr2	-	1380	8	ISM	ENSG00000144036.16	ENST00000410104.1	5795	18	-7	97650	-7	-59198	5prime_fragment	FALSE	canonical	3	152	junction_3	13.9970842444753	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTACTTTTTTATTCCTA	-72818569	True	NA	NA	False	ATTAAA	-17	NA	72826048	72559125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_80916.nic	chr2	-	1103	8	ISM	ENSG00000144036.16	ENST00000410104.1	5795	18	-7	97927	-7	-59475	5prime_fragment	FALSE	canonical	3	152	junction_3	13.9970842444753	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGCTCTCTCAACTTTTG	-72818569	True	NA	NA	False	AATAAA	-21	NA	72826048	72559402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_80924.nic	chr2	-	2194	5	ISM	ENSG00000144036.16	ENST00000410104.1	5795	18	-7	267939	-7	-229487	5prime_fragment	FALSE	canonical	3	161	junction_4	15.6044865343272	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCACCTGTGTACCAACTT	-72818569	True	NA	NA	False	NA	NA	NA	72826048	72729414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_80927.known	chr2	-	5795	18	FSM	ENSG00000144036.16	ENST00000410104.1	5795	18	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_3	14.2879434741226	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGAGATGTGATCTTAT	-72818562	True	NA	NA	False	ATTAAA	-26	NA	72826041	72461475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72465340_72480615_72480751_72492317_72492430_72495429_72495540_72496453_72496560_72498453_72498552_72499900_72499973_72513131_72513253_72514633_72514681_72515042_72515127_72559452_72559522_72575491_72575669_72718102_72718308_72731006_72731053_72731154_72731246_72733070_72733119_72741303_72741470_72825797
transcript_8093.nnic	chr1	+	750	3	NIC	ENSG00000122481.17	novel	796	5	NA	NA	-60	0	combination_of_known_splicesites	FALSE	canonical	3	128	junction_1	49	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGTTTTCATGTTTGCT	95231850	True	NA	4	True	ATTAAA	-16	NA	95234149	95247223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_95234316_95246541_95246658_95246755
transcript_80931.known	chr2	+	959	2	FSM	ENSG00000135638.14	ENST00000464675.2	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTTTGATGCATTTCTGT	72923914	True	NA	NA	False	NA	NA	NA	72923987	72934239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_72924494_72933786
transcript_80933.known	chr2	-	4016	14	FSM	ENSG00000144040.13	ENST00000272433.7	4016	14	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	44.0928283827756	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGGGTGTGGTTTTGTGAA	-73069448	True	NA	-2	True	AATAAA	-17	NA	73071712	72942035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72945100_72961130_72961249_72968447_72968534_72971569_72971686_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_80940.known	chr2	-	895	11	FSM	ENSG00000144040.13	ENST00000416579.5	895	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	60.5788742054522	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCCTCCTGCTTTTCTT	-73069464	True	NA	NA	False	AATACA	-14	NA	73071728	72973180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_72973428_72988257_72988349_72998948_72999015_73000430_73000488_73001524_73001579_73020238_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_80945.nic	chr2	-	605	6	ISM	ENSG00000144040.13	ENST00000416579.5	895	11	-72	46905	-72	0	5prime_fragment	FALSE	canonical	3	155	junction_1	34.4185996228783	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACATCTCTTGATGCTGAT	-73071787	False	NA	NA	False	AATAAA	-18	NA	73071800	73020085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_73020265_73022521_73022577_73023187_73023215_73040853_73040932_73058527_73058597_73071603
transcript_80950.known	chr2	-	1690	3	FSM	ENSG00000144040.13	ENST00000472259.5	1690	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	-73071253	False	2264	NA	False	TATAAA	-30	NA	73071266	73049085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73049900_73058527_73058597_73070459
transcript_80952.nic	chr2	-	1080	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-72	0	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	101.5	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCACAGTTAGTGTAAGATA	-73071787	False	NA	NA	False	TATAAA	-30	NA	73071800	73049085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_80954.nic	chr2	-	903	3	NIC	ENSG00000144040.13	novel	1690	3	NA	NA	-72	-177	combination_of_known_junctions	FALSE	canonical	3	41	junction_1	101.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTTTGGCCCTCTTGCCGT	-73071787	False	NA	NA	False	AATAAA	-15	NA	73071800	73049262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_73049900_73058527_73058597_73071603
transcript_80957.known	chr2	-	351	3	FSM	ENSG00000144040.13	ENST00000484123.1	351	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	91.5	419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCAGTGTTGCTGACTGTT	-73071649	False	NA	-4	True	AATAAA	-39	NA	73071662	73053328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73053552_73058527_73058597_73071603
transcript_80958.known	chr2	+	420	2	FSM	ENSG00000272702.1	ENST00000608612.1	420	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAATATTTAAGTGTTCACT	NA	False	NA	2	True	AATAAA	-13	NA	73113017	73113630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73113207_73113399
transcript_80960.nic	chr2	+	2672	13	NIC	ENSG00000135632.12	novel	2554	13	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_2	71.479989429832	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210256	True	NA	13	True	AATAAA	-14	NA	73214225	73227221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_73214363_73218860_73218970_73219951_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_80962.known	chr2	+	2554	13	FSM	ENSG00000135632.12	ENST00000389501.9	2554	13	0	0	0	0	multi-exon	FALSE	canonical	3	241	junction_5	15.3920975395385	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGCCTCTGCAGGAATGCT	73210275	True	NA	13	True	AATAAA	-14	NA	73214244	73227221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73214363_73218860_73218970_73220050_73220191_73220660_73220783_73221164_73221235_73221825_73221931_73222754_73222818_73223035_73223107_73223425_73223533_73223946_73224004_73224865_73224961_73225630_73225702_73225795
transcript_80967.known	chr2	-	1090	5	FSM	ENSG00000135617.4	ENST00000258083.3	1090	5	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	13.1600721882519	275	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTGTGTCCTAGAATAA	-73232247	True	NA	-4	True	AATAAA	-42	NA	73233239	73228009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73228575_73228794_73228963_73229460_73229571_73230112_73230214_73233093
transcript_80968.known	chr2	+	2031	13	FSM	ENSG00000135624.17	ENST00000539919.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1402.03806761998	7522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_8097.known	chr1	+	513	2	FSM	ENSG00000122481.17	ENST00000473397.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATTTGTTTTCATGTTT	95231968	False	NA	1	True	ATTAAA	-13	NA	95234267	95247220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_95234316_95246755
transcript_80970.known	chr2	+	1674	10	FSM	ENSG00000135624.17	ENST00000540468.5	1674	10	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	1179.41354960321	12195	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTTGGCATGGTACTCATA	73181756	True	NA	41	True	AATAAA	-30	NA	73234235	73253021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_80975.known	chr2	+	1234	7	FSM	ENSG00000135624.17	ENST00000398422.2	1234	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1448.38055158933	7248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAACTTTGTAAATTATT	73181828	True	NA	24	True	AATAAA	-13	NA	73234307	73253004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_80981.known	chr2	+	1847	12	FSM	ENSG00000135624.17	ENST00000258091.10	1847	12	0	0	0	0	multi-exon	FALSE	canonical	3	3375	junction_1	269.770609626367	27650	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAACTTTGTAAATTATTT	73181828	True	NA	25	True	AATAAA	-14	NA	73234307	73253005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73239642_73239797_73240436_73240544_73243003_73243130_73243996_73244050_73244543_73244716_73247761_73247927_73248990_73249180_73249818_73249917_73250305_73250439_73251225_73251433_73252639
transcript_80982.known	chr2	+	593	6	FSM	ENSG00000135624.17	ENST00000399032.2	593	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1830.82390196327	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGAAGAAGGCAGATAAAGT	73181828	True	NA	NA	False	NA	NA	NA	73234307	73244029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73234385_73235549_73235646_73239642_73239797_73240436_73240544_73243003_73243130_73243996
transcript_80983.nic	chr2	-	568	3	ISM	ENSG00000163013.12	ENST00000520186.1	817	4	115	810	115	-810	5prime_fragment	FALSE	canonical	2	7	junction_1	1.5	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTGGTTAGGATATTTT	-73283024	False	1292	0	True	ATTAAA	-22	NA	73284316	73272006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_73272303_73273014_73273130_73284159
transcript_80984.nnic	chr2	+	316	2	Intergenic	novelGene_24	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	43	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTGTTGTGATGTTTCTC	NA	False	NA	NA	False	NA	NA	NA	73284478	73286119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_73284583_73285907
transcript_81.known	ERCC-00168	+	1007	1	FSM	ERCC-00168A	DQ516776	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00168_+_0_1000
transcript_81003.known	chr2	-	536	4	FSM	ENSG00000144034.16	ENST00000489476.5	536	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	435.385142399488	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCACCCTTCGCAAGCCTC	-73730625	True	NA	NA	False	NA	NA	NA	73737335	73729103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73737301
transcript_81008.known	chr2	-	664	5	FSM	ENSG00000144034.16	ENST00000272424.11	664	5	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_4	157.209255452725	6742	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTAATTGTGCATTATAGAAA	-73730635	True	NA	NA	False	ATTAAA	-34	NA	73737345	73729872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_81009.known	chr2	-	575	5	FSM	ENSG00000144034.16	ENST00000463231.5	575	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	373.007037467123	489	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGCCTTGGTGATTTTA	-73730665	True	NA	NA	False	TTTAAA	-2	NA	73737375	73729168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734527_73734592_73737301
transcript_81010.known	chr2	-	816	6	FSM	ENSG00000144034.16	ENST00000409716.6	816	6	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	360.68401683468	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73730690	True	NA	NA	False	ATTAAA	-17	NA	73737400	73729889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730030_73730559_73730737_73732162_73732286_73732583_73732701_73734428_73734589_73737301
transcript_81011.known	chr2	-	730	2	FSM	ENSG00000144034.16	ENST00000485758.1	730	2	0	0	0	0	multi-exon	FALSE	canonical	3	838	junction_1	0	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCCTGACTATAAAACTA	-73724439	False	NA	NA	False	ATTAAA	-17	NA	73731149	73729889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730030_73730559
transcript_81012.known	chr2	-	798	4	FSM	ENSG00000144034.16	ENST00000497464.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	510	junction_3	174.021710012158	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATAGAAATTTGGTTTTT	-73730630	True	NA	-3	True	AATAAA	-19	NA	73737340	73730263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73730737_73732162_73732286_73734428_73734592_73737301
transcript_81013.known	chr2	-	592	5	FSM	ENSG00000144034.16	ENST00000484969.5	592	5	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	350.839261628456	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAAGCGCTGGAATTACAG	-73730648	True	NA	NA	False	NA	NA	NA	73737358	73729233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73729306_73730559_73730737_73732162_73732286_73734428_73734592_73737301
transcript_81014.known	chr2	-	1653	9	FSM	ENSG00000144048.10	ENST00000272444.7	1653	9	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_7	20.3834338373101	726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAATTGTGGTATTTTTGTG	-73776585	True	NA	-2	True	NA	NA	NA	73780157	73762183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73762860_73766417_73766595_73766827_73766904_73767160_73767208_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_81015.known	chr2	-	2175	6	FSM	ENSG00000144048.10	ENST00000443070.5	2175	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	98.378859517683	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTTCTGGAGTTGGGTCA	-73776549	True	NA	NA	False	AATAAA	-11	NA	73780121	73767418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73768953_73769264_73769326_73773799_73773924_73774912_73775045_73778300_73778377_73779873
transcript_81016.nnic	chr2	-	507	2	NNC	ENSG00000287250.1	novel	1154	2	NA	NA	-4234	-631	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTACGTATTTCT	-73828806	True	NA	NA	False	NA	NA	NA	73828827	73823784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_73824221_73828756
transcript_81021.known	chr2	+	6280	12	FSM	ENSG00000124356.17	ENST00000682848.1	6280	12	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	99.6770819253705	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823248	True	NA	-1	True	AATAAA	-16	NA	73828986	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73847662_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81022.known	chr2	+	2144	12	FSM	ENSG00000124356.17	ENST00000682799.1	2144	12	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_10	128.489701166222	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGTAACAATTAACTTATG	73823244	True	NA	18	True	AATAAA	-28	NA	73828982	73862866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
transcript_81023.known	chr2	+	1880	12	FSM	ENSG00000124356.17	ENST00000683852.1	1880	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	130.927713321903	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	73823248	True	NA	NA	False	NA	NA	NA	73828986	73873601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_81025.known	chr2	+	1969	11	FSM	ENSG00000124356.17	ENST00000683349.1	1969	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	145.041924973437	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTTTGTCAGGAATTATT	NA	False	NA	-42	True	NA	NA	NA	73828917	73862806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73860533_73860590_73862202
transcript_81026.known	chr2	+	6316	11	FSM	ENSG00000124356.17	ENST00000684585.1	6316	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	100.670204132107	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823228	True	NA	-1	True	AATAAA	-16	NA	73828966	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81028.known	chr2	+	6145	11	FSM	ENSG00000124356.17	ENST00000683928.1	6145	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	104.586614822357	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823292	True	NA	-1	True	AATAAA	-16	NA	73829030	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847573_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81029.known	chr2	+	6315	11	FSM	ENSG00000124356.17	ENST00000683391.1	6315	11	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	109.703281628217	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823294	True	NA	-1	True	AATAAA	-16	NA	73829032	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845175_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81031.known	chr2	+	6516	11	FSM	ENSG00000124356.17	ENST00000682784.1	6516	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	104.902049550998	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823250	True	NA	-1	True	AATAAA	-16	NA	73828988	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73845037_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81032.known	chr2	+	6207	10	FSM	ENSG00000124356.17	ENST00000683434.1	6207	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	130.158023614033	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823228	True	NA	-1	True	AATAAA	-16	NA	73828966	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73830844_73831060_73844812_73844889_73845166_73845263_73847389_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81035.known	chr2	+	6261	10	FSM	ENSG00000124356.17	ENST00000682351.1	6261	10	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	96.1500884355955	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823251	True	NA	-1	True	AATAAA	-16	NA	73828989	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_8104.nnic	chr1	-	816	2	Genic_Genomic	ENSG00000137970.7	novel	747	1	NA	NA	-21	91	multi-exon	FALSE	canonical	0	0	junction_1	0	2078	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAGTTTAACTCAAA	NA	False	NA	NA	False	NA	NA	NA	96679641	96678782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_96679173_96679215
transcript_81040.known	chr2	+	6019	9	FSM	ENSG00000124356.17	ENST00000682851.1	6019	9	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	111.396182048578	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAATCATCCAATTAATAAA	73823204	True	NA	-1	True	AATAAA	-16	NA	73828942	73867152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73828997_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73862202
transcript_81044.nic	chr2	+	583	5	ISM	ENSG00000124356.17	ENST00000536064.2	1997	13	4	17541	2	-360	5prime_fragment	FALSE	canonical	3	171	junction_1	72.9121903387904	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTCAGTATATAACAGCTAA	73823241	True	NA	NA	False	AATATA	-20	NA	73828979	73845261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_73829071_73829404_73829511_73830844_73831060_73844812_73844889_73845166
transcript_81049.known	chr2	+	1778	11	FSM	ENSG00000124356.17	ENST00000684716.1	1778	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	150.45876511523	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACAAACCATTCCCTGT	73823244	True	NA	NA	False	NA	NA	NA	73828982	73873601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73829071_73830844_73831060_73844812_73844889_73845166_73845263_73847386_73847754_73849362_73849488_73850375_73850514_73859253_73859367_73860051_73860152_73870142_73870353_73873351
transcript_8105.nnic	chr1	-	979	2	Genic_Genomic	ENSG00000137970.7	novel	747	1	NA	NA	-12989	91	multi-exon	FALSE	canonical	0	0	junction_1	0	131757	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGACAAAAGTTTAACTCAAA	NA	False	NA	NA	False	NA	NA	NA	96692609	96678782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_96679670_96692517
transcript_81053.known	chr2	+	1501	9	FSM	ENSG00000163017.14	ENST00000345517.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	4.79420222769128	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	73892694	True	NA	NA	False	ATTAAA	-22	NA	73893007	73919865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73893052_73901275_73901438_73902359_73902489_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_81054.known	chr2	+	1413	8	FSM	ENSG00000163017.14	ENST00000409731.7	1413	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.13141941391353	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTAGTGCTCCTTCTACTGT	73892653	True	NA	NA	False	ATTAAA	-22	NA	73892966	73919865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73893052_73901275_73901438_73908672_73908784_73909054_73909140_73913484_73913647_73914679_73914872_73916583_73916766_73919431
transcript_81067.known	chr2	+	1075	7	FSM	ENSG00000114956.20	ENST00000264093.9	1075	7	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	649.605371659509	959	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906412	True	NA	15	True	AATAAA	-15	NA	73926879	73958946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_8107.nnic	chr1	-	942	2	Genic_Genomic	ENSG00000137970.7	novel	747	1	NA	NA	-12989	83	multi-exon	FALSE	canonical	0	0	junction_1	0	130435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGGACAAAAGTTT	NA	False	NA	NA	False	AATAAA	-41	NA	96692609	96678790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_-_96679682_96692558
transcript_8108.known	chr1	-	747	1	FSM	ENSG00000137970.7	ENST00000468715.1	747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3296	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTCTACCATGATTATTT	-96679207	True	NA	NA	False	AATGAA	-5	NA	96679620	96678873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_96678900_96679600
transcript_81092.known	chr2	+	880	5	FSM	ENSG00000114956.20	ENST00000348222.3	880	5	0	0	0	0	multi-exon	FALSE	canonical	3	418	junction_1	764.465622183235	1452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGCTCATTTATTTC	73906358	True	NA	30	True	AATAAA	-30	NA	73926825	73958961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73938909_73939023_73946718_73946907_73958145_73958246_73958709
transcript_8110.known	chr1	+	3054	14	FSM	ENSG00000117569.19	ENST00000370198.5	3054	14	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_8	45.709010156286	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813275
transcript_81105.nnic	chr2	+	705	4	NIC	ENSG00000114956.20	novel	1075	7	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	75	junction_1	933.567470631996	703	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906333	True	NA	15	True	AATAAA	-15	NA	73926800	73958946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_73927053_73957124_73957241_73958145_73958246_73958709
transcript_8111.known	chr1	+	3057	14	FSM	ENSG00000117569.19	ENST00000370197.5	3057	14	0	0	0	0	multi-exon	TRUE	canonical	3	42	junction_8	48.4564099850479	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGGAGGTTTGATGGTTG	96717292	True	NA	13	True	ATTAAA	-19	NA	96721809	96814793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_96721873_96723563_96723595_96751424_96751501_96769702_96769876_96770707_96770852_96777584_96777750_96777835_96777947_96785058_96785255_96804784_96804940_96806418_96806453_96806865_96806959_96812711_96812929_96813028_96813107_96813272
transcript_81110.nnic	chr2	+	596	3	NIC	ENSG00000114956.20	novel	703	4	NA	NA	-32	0	combination_of_known_splicesites	FALSE	canonical	3	302	junction_1	995.5	1931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	NA	False	NA	15	True	AATAAA	-15	NA	73926793	73958946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_73927053_73958145_73958246_73958709
transcript_81111.known	chr2	-	601	2	FSM	ENSG00000237883.3	ENST00000453103.1	601	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCCGGAGCCTGCACGGCC	-73981298	True	NA	NA	False	NA	NA	NA	73981441	73947641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73947936_73981134
transcript_81112.known	chr2	-	563	2	FSM	ENSG00000237883.3	ENST00000413452.2	745	2	179	3	8	-3	multi-exon	TRUE	canonical	3	8	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGGTTGAGGTTTCTCTTC	-73981290	True	NA	NA	False	AATAAA	-16	NA	73981433	73957969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73958208_73981108
transcript_81113.known	chr2	-	419	2	FSM	ENSG00000237883.3	ENST00000439192.2	553	2	85	49	52	-49	multi-exon	FALSE	canonical	3	8	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACTGCATTTAAAAAAACA	-73981218	True	NA	NA	False	AAGAAA	-9	NA	73981361	73958015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_73958208_73981134
transcript_81114.known	chr2	+	703	4	FSM	ENSG00000114956.20	ENST00000418996.5	703	4	0	0	0	0	multi-exon	FALSE	canonical	3	1177	junction_2	455.63460018845	6194	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTTCTAATTCAG	73906407	True	NA	15	True	AATAAA	-15	NA	73926874	73958946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73946718_73946907_73958145_73958246_73958709
transcript_81115.known	chr2	+	1029	6	FSM	ENSG00000114956.20	ENST00000629438.2	1029	6	0	0	0	0	multi-exon	FALSE	canonical	3	633	junction_3	679.272728732723	2461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTCAGTTGCTCATTTATT	73906358	True	NA	28	True	AATAAA	-28	NA	73926825	73958959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_73927053_73946718_73946907_73950584_73950733_73957124_73957241_73958145_73958246_73958709
transcript_81119.known	chr2	-	555	4	FSM	ENSG00000163170.12	ENST00000327428.10	555	4	0	0	0	0	multi-exon	TRUE	canonical	3	1556	junction_1	299.322568477554	6858	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGTAATGTTTCAGGTTCC	-74136256	True	NA	-3	True	ATTAAA	-33	NA	74147912	74135399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74135659_74142271_74142361_74145188_74145304_74147820
transcript_81123.known	chr2	-	444	3	FSM	ENSG00000163170.12	ENST00000295326.4	444	3	0	0	0	0	multi-exon	FALSE	canonical	3	845	junction_1	709.5	2951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTGAAGGGTCATTAGT	-74136249	True	NA	-18	True	ATTAAA	-18	NA	74147905	74135414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74135659_74145188_74145304_74147820
transcript_81126.known	chr2	+	3520	3	FSM	ENSG00000225439.4	ENST00000656407.1	3520	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCCAGCACTTTGGGGCCG	74146537	True	NA	NA	False	NA	NA	NA	74148078	74151952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74148224_74148349_74148479_74148706
transcript_81131.known	chr2	+	1804	2	FSM	ENSG00000225439.4	ENST00000423477.2	1804	2	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	0	412	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTACTTTTGCTTATCTCTA	74146497	True	NA	50	True	NA	NA	NA	74148038	74150061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74148479_74148697
transcript_81135.known	chr2	+	631	2	FSM	ENSG00000225439.4	ENST00000529783.1	631	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTCTGGCCTTCAGAAT	NA	False	NA	15	True	NA	NA	NA	74148008	74149054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74148479_74148893
transcript_81139.known	chr2	-	4896	6	FSM	ENSG00000114978.18	ENST00000396049.5	4896	6	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_2	39.7290825466685	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCTGTGGATTTTTGAGT	-74168504	True	NA	NA	False	AATATA	-20	NA	74178879	74152527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74156646_74159090_74159255_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_81144.nnic	chr2	-	1218	5	NIC	ENSG00000114978.18	novel	4896	6	NA	NA	-23	2985	combination_of_known_splicesites	FALSE	canonical	3	27	junction_1	382.146159865568	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGAGATTTAGAACATC	-74168546	True	NA	-14	True	AATAAA	-18	NA	74178921	74156083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_74156646_74165217_74165352_74167013_74167108_74172585_74172753_74178660
transcript_81145.known	chr2	-	493	2	FSM	ENSG00000114978.18	ENST00000494600.1	493	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTGCAGAAACACAGTATT	-74168504	True	NA	NA	False	TATAAA	-33	NA	74178879	74178007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74178282_74178660
transcript_81147.known	chr2	+	4033	6	FSM	ENSG00000065911.13	ENST00000677377.1	4033	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	465.960341660103	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCACATGAATGGGAGTT	74181813	True	NA	-39	True	NA	NA	NA	74198614	74217503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_81148.known	chr2	+	4403	8	FSM	ENSG00000065911.13	ENST00000394053.7	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	852	junction_1	120.173514009484	1225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCCAAATGTATCATGAAATG	74181813	True	NA	23	True	AATAAA	-27	NA	74198614	74217565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74205704_74205890_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_81149.known	chr2	+	1396	7	FSM	ENSG00000065911.13	ENST00000470592.5	1396	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	377.967995411722	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCAACCAGATTTATCTAAG	74181811	True	NA	81	True	NA	NA	NA	74198612	74214741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_81150.known	chr2	+	1757	5	FSM	ENSG00000065911.13	ENST00000409804.5	1757	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	459.929070618503	275	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGTCTTCCTATGACTCC	74181808	True	NA	43	True	AATAAA	-35	NA	74198609	74215298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74205704_74205890_74211198_74211292_74211740_74211867_74214078
transcript_81151.known	chr2	+	2320	10	FSM	ENSG00000065911.13	ENST00000678228.1	2320	10	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	536.79124387994	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGTATGAATTTCTGAAAT	74181815	True	NA	24	True	AATAAA	-16	NA	74198616	74215279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74198743_74201381_74201480_74205704_74205890_74205981_74206089_74207703_74207827_74208568_74208722_74209941_74210050_74211198_74211292_74211740_74211867_74214078
transcript_81152.known	chr2	-	4365	28	FSM	ENSG00000204843.13	ENST00000409240.5	4365	28	0	0	0	0	multi-exon	TRUE	canonical	3	767	junction_18	107.955231284043	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTCCTGTGTGGTGTTGA	-74392075	False	NA	-5	True	ATTAAA	-17	NA	74392087	74361156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74361637_74362051_74362142_74362649_74362730_74362993_74363178_74363293_74363428_74365074_74365242_74365514_74365658_74365892_74366019_74366243_74366376_74366458_74366621_74366782_74366933_74367044_74367108_74367351_74367421_74367695_74367865_74367970_74368132_74368727_74368881_74369097_74369215_74369299_74369492_74369964_74370070_74370185_74370346_74370465_74370545_74370620_74370826_74370978_74371177_74371536_74371729_74377431_74377467_74377647_74377727_74377999_74378246_74391793
transcript_81162.known	chr2	+	1360	1	FSM	ENSG00000286623.1	ENST00000666479.1	1360	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTGGTGCTATTTAGAGTC	NA	False	NA	NA	False	AGTAAA	-13	NA	74415421	74416781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74415400_74416800
transcript_81163.known	chr2	+	1046	10	FSM	ENSG00000005448.17	ENST00000480089.5	1046	10	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	217.941265165017	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTGACTGGCTATGACCT	74412753	True	NA	-77	True	NA	NA	NA	74421758	74425650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422119_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_81167.nnic	chr2	+	1148	10	NNC	ENSG00000005448.17	novel	1147	10	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	227.791815285605	261	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412701	True	NA	28	True	CATAAA	-17	NA	74421706	74425755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_74421795_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_8117.nic	chr1	+	1762	10	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	31	junction_2	107.799196039055	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98660033	True	NA	8	True	AATAAA	-15	NA	98661814	98760500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_81188.known	chr2	+	1147	10	FSM	ENSG00000005448.17	ENST00000348227.4	1147	10	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_1	81.5381452806137	4509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412724	True	NA	28	True	CATAAA	-17	NA	74421729	74425755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422152_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_81189.known	chr2	+	854	9	FSM	ENSG00000005448.17	ENST00000409791.5	854	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_8	287.255113096356	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCCTTTGTCTGATTACTCA	74412723	True	NA	27	True	CATAAA	-16	NA	74421728	74425754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74421817_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425639
transcript_81190.known	chr2	+	2356	6	FSM	ENSG00000005448.17	ENST00000468778.5	2356	6	0	0	0	0	multi-exon	FALSE	canonical	3	635	junction_3	51.6162765026692	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412760	True	NA	28	True	CATAAA	-17	NA	74421765	74425755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74422933_74423318_74423983_74424874_74424976_74425074_74425238_74425416_74425492_74425569
transcript_81191.known	chr2	+	1862	7	FSM	ENSG00000005448.17	ENST00000465134.5	1862	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	274.602996261067	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74412738	True	NA	28	True	CATAAA	-17	NA	74421743	74425755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74425074_74425238_74425416_74425492_74425569
transcript_81192.known	chr2	+	1026	6	FSM	ENSG00000005448.17	ENST00000482880.5	1026	6	0	0	0	0	multi-exon	FALSE	canonical	3	651	junction_1	26.6458251889485	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGGTGAGGCAGAAAGGGTA	74412758	True	NA	NA	False	NA	NA	NA	74421763	74424976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74422376_74422869_74422933_74423318_74423386_74423477_74423532_74423854_74423983_74424874
transcript_81193.known	chr2	+	626	3	FSM	ENSG00000005448.17	ENST00000482605.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	3	774	junction_2	1	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGTCTGATTACTCAG	74415867	False	NA	28	True	CATAAA	-17	NA	74424872	74425755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74425238_74425416_74425492_74425569
transcript_81194.known	chr2	-	2646	13	FSM	ENSG00000114993.17	ENST00000305557.9	2646	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	151.733227152863	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACCTGCCTCACATCATCC	-74440167	False	5307	20	True	NA	NA	NA	74440583	74425835	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74439550_74439978_74440352
transcript_81199.known	chr2	-	2220	12	FSM	ENSG00000114993.17	ENST00000233330.6	2220	12	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_11	108.725752497733	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTCACCTGGCTCCTGAG	-74440215	False	NA	-27	True	ATTAAA	-15	NA	74440631	74425882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74440352
transcript_8120.known	chr1	+	1736	9	FSM	ENSG00000162627.17	ENST00000306121.8	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_2	26.7055705799371	1001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98659939	True	NA	8	True	AATAAA	-15	NA	98661720	98760500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_81200.known	chr2	-	2221	12	FSM	ENSG00000114993.17	ENST00000272430.10	2221	12	0	0	0	0	multi-exon	FALSE	canonical	3	369	junction_4	27.7795334615044	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGCCTCACATCATCCC	-74436630	True	NA	21	True	NA	NA	NA	74441937	74425834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74426575_74427168_74427274_74427423_74427593_74428267_74428397_74428630_74428738_74428847_74428943_74429827_74430038_74430251_74430370_74430464_74430519_74430615_74430678_74432466_74432667_74441705
transcript_8121.known	chr1	+	1562	9	FSM	ENSG00000162627.17	ENST00000528824.1	1562	9	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	121.369013755571	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98660080	False	NA	8	True	AATAAA	-15	NA	98661861	98760500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98662696_98662817_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_81220.known	chr2	-	820	2	FSM	ENSG00000114993.17	ENST00000484453.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	3	435	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCTGCTAGTGTGCAAC	-74442003	True	NA	NA	False	NA	NA	NA	74442419	74432560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74432667_74441705
transcript_81230.known	chr2	+	989	5	FSM	ENSG00000239779.7	ENST00000428943.1	989	5	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_2	290.875402878965	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGGGTGACCCCTGCCT	74451522	True	NA	NA	False	NA	NA	NA	74458471	74460443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74458831_74459118_74459642_74459746_74459872_74460050_74460220
transcript_81232.known	chr2	+	1175	4	FSM	ENSG00000239779.7	ENST00000233615.7	1175	4	0	0	0	0	multi-exon	FALSE	canonical	3	464	junction_1	64.9153294684699	2452	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTACTTGTGGATTTGGGTG	74451488	True	NA	14	True	ATTAAA	-14	NA	74458437	74460881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459642_74459746_74459872_74460050_74460220
transcript_81233.known	chr2	+	1325	5	FSM	ENSG00000239779.7	ENST00000393972.7	1325	5	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_1	284.913144659912	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTTGGGTGGACTAAAGCT	74458337	False	NA	24	True	ATTAAA	-24	NA	74458399	74460891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74458996_74459099_74459642_74459746_74459872_74460050_74460220
transcript_81235.known	chr2	+	1069	5	FSM	ENSG00000239779.7	ENST00000494741.5	1069	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	295.575180791622	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGGTTACTTGCCCAC	74451524	True	NA	NA	False	GGGGCT	-44	NA	74458473	74460696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459437_74459553_74459642_74459746_74459872_74460050_74460220
transcript_81238.known	chr2	+	597	5	FSM	ENSG00000239779.7	ENST00000464774.6	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	295.323974644796	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACCTTCAAGCCCCCAGCCT	74451500	True	NA	66	True	NA	NA	NA	74458449	74460230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459477_74459563_74459642_74459746_74459872_74460050_74460220
transcript_8124.nic	chr1	+	1547	8	NIC	ENSG00000162627.17	novel	1736	9	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	63	junction_7	84.3936355081692	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTTGGCTGCAGTGTATT	98659975	True	NA	8	True	AATAAA	-15	NA	98661756	98760500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_98661912_98684884_98685068_98691074_98691186_98691534_98691700_98695517_98695717_98698705_98698906_98701816_98701904_98760053
transcript_81242.known	chr2	+	765	4	FSM	ENSG00000239779.7	ENST00000470536.5	765	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	256.70259488798	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGAGTCTGTACCGCAGA	74451500	True	NA	NA	False	NA	NA	NA	74458449	74460617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458538_74459642_74459746_74459872_74460050_74460220
transcript_8126.known	chr1	+	1589	8	FSM	ENSG00000162627.17	ENST00000529992.5	1589	8	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_3	103.332828614084	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGGTTGGCTGCAGTGTA	98659919	True	NA	6	True	AATAAA	-13	NA	98661700	98760498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_98661912_98684884_98685068_98691074_98691186_98695517_98695717_98698705_98698906_98701816_98701904_98738236_98738390_98760053
transcript_81266.known	chr2	+	1110	4	FSM	ENSG00000239779.7	ENST00000409737.5	1110	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	282.113846207913	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCTCATTAAAGAGATGTG	74451519	True	NA	-11	True	NA	NA	NA	74458468	74460856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74458672_74459651_74459746_74459872_74460050_74460220
transcript_81267.known	chr2	+	2047	4	FSM	ENSG00000239779.7	ENST00000484744.5	2047	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	277.878070783252	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTGTGGATTTGGGTGGA	74451509	True	NA	16	True	ATTAAA	-16	NA	74458458	74460883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74459563_74459642_74459746_74459872_74460050_74460220
transcript_81271.known	chr2	+	2916	13	FSM	ENSG00000115282.21	ENST00000233623.11	2916	13	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_8	27.0373969407806	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480004	True	NA	29	True	AATAAA	-18	NA	74483080	74494559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138_74492230_74492303_74492446_74492645_74492748_74492921
transcript_81277.known	chr2	-	4128	9	FSM	ENSG00000135637.14	ENST00000393965.8	4128	9	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_7	5.38371386683951	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTTCTTTCCTGCCTTC	-74482507	True	NA	NA	False	NA	NA	NA	74482998	74472831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481087_74481222_74481373_74481451_74481539_74481816
transcript_81279.known	chr2	-	2316	6	FSM	ENSG00000115275.15	ENST00000649601.1	2316	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	103.640532611522	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGTCTATTTTTCTAAATAA	-74457178	False	8184	-45	True	NA	NA	NA	74465362	74461101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74463013_74463189_74463220_74463379_74463387_74464495_74464723_74464895_74464988_74465313
transcript_81280.known	chr2	-	2433	5	FSM	ENSG00000115275.15	ENST00000452063.7	2433	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	87.0545805802314	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTCAAACCTTCCTCATTT	-74457212	False	8184	-122	True	NA	NA	NA	74465396	74461178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74463013_74463189_74463387_74464495_74464723_74464895_74464988_74465313
transcript_81282.known	chr2	-	2269	4	FSM	ENSG00000115275.15	ENST00000647915.1	2269	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	87.4693597146389	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGTGAATGTGAATCCAGA	-74457216	False	8184	-63	True	NA	NA	NA	74465400	74461119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74463013_74463189_74463387_74464895_74464988_74465313
transcript_81287.known	chr2	-	386	2	FSM	ENSG00000204822.7	ENST00000409710.1	386	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAATGTTTCTGGAACAAGA	-74464503	True	NA	-6	True	AATAAA	-19	NA	74472687	74471985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472253_74472568
transcript_81288.known	chr2	-	496	3	FSM	ENSG00000204822.7	ENST00000258105.8	496	3	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_2	7.5	7437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCTGGAACAAGACTAG	-74464496	True	NA	-2	True	AATAAA	-23	NA	74472680	74471981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472253_74472357_74472471_74472568
transcript_81289.known	chr2	-	574	2	FSM	ENSG00000204822.7	ENST00000468875.1	574	2	0	0	0	0	multi-exon	FALSE	canonical	3	662	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTACCACAATGTTTCTGG	-74464480	True	NA	-13	True	AATAAA	-12	NA	74472664	74471992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472471_74472568
transcript_81290.known	chr2	-	451	2	FSM	ENSG00000204822.7	ENST00000467349.1	451	2	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_1	0	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTACCACAATGTTTCTGGA	-74464363	False	NA	-12	True	AATAAA	-13	NA	74472547	74471991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74472253_74472357
transcript_81291.known	chr2	-	2835	9	FSM	ENSG00000135637.14	ENST00000290418.4	2835	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	8	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-74482505	True	NA	NA	False	NA	NA	NA	74482996	74474101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74474803_74474915_74475116_74475224_74475403_74475611_74475727_74480768_74480883_74480955_74481066_74481222_74481373_74481451_74481539_74481816
transcript_81292.known	chr2	+	3358	10	FSM	ENSG00000115282.21	ENST00000410003.5	3358	10	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_8	29.3160723625357	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCCTACATAGTCATGCT	74480010	True	NA	29	True	AATAAA	-18	NA	74483086	74494559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74483136_74483321_74483411_74490024_74490128_74490243_74490474_74490655_74490740_74491127_74491185_74491294_74491376_74491480_74491673_74492003_74492056_74492138
transcript_81293.known	chr2	-	1073	2	FSM	ENSG00000179528.16	ENST00000377566.9	1073	2	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCCTCTATCCAGACGC	-74498843	False	121	0	True	AATAAA	-18	NA	74499603	74497516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74498319_74499332
transcript_81294.known	chr2	+	2083	1	FSM	ENSG00000257702.4	ENST00000603175.1	2083	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTTGGATTTTTCTTTA	74502571	False	NA	11	True	TATAAA	-12	NA	74502594	74504677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74502600_74504700
transcript_81297.known	chr2	-	718	9	FSM	ENSG00000115289.14	ENST00000480844.2	718	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	50.3386965961575	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGGGCCAAGCCCCCACCC	-74507400	False	NA	-107	True	AATACA	-21	NA	74507417	74505145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505613_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_81300.nic	chr2	-	899	9	NIC	ENSG00000115289.14	novel	907	9	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_8	39.0830445973698	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507452	False	NA	-4	True	AATAAA	-16	NA	74507469	74505042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507357
transcript_81302.known	chr2	-	1056	8	FSM	ENSG00000115289.14	ENST00000475863.5	1056	8	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_2	7.71693076346829	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74507399	False	NA	-4	True	AATAAA	-16	NA	74507416	74505042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041
transcript_81314.known	chr2	-	907	9	FSM	ENSG00000115289.14	ENST00000233630.11	907	9	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_8	11.0113577727726	399	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTTCTGCCTTATTCT	-74506935	True	NA	-4	True	AATAAA	-16	NA	74507695	74505042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74505191_74505338_74505420_74505551_74505639_74505736_74505771_74505951_74506058_74506180_74506253_74506731_74506885_74507041_74507148_74507575
transcript_81316.known	chr2	-	3689	14	FSM	ENSG00000115318.12	ENST00000264094.8	3689	14	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_13	63.9682798612122	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGGTTGGCTGAGTATTCA	-74553805	True	NA	NA	False	AATAAA	-19	NA	74553942	74532257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74536708_74536929_74549368_74549584_74550184_74550349_74552321_74552647_74553875
transcript_81318.known	chr2	-	2837	10	FSM	ENSG00000115318.12	ENST00000470907.6	2837	10	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_9	35.1687290952181	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATGACAAACAGTGTTAAAT	-74549649	False	NA	-3	True	AATAAA	-44	NA	74549663	74532413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74533680_74533881_74533994_74534099_74534237_74534315_74534432_74534530_74534775_74535291_74535455_74535587_74535756_74535995_74536151_74536290_74536472_74549368
transcript_81320.known	chr2	+	1294	9	FSM	ENSG00000115317.12	ENST00000462909.5	1294	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	58.7057013841075	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAAATAAAATTATACCTAG	74529702	False	NA	NA	False	NA	NA	NA	74529724	74533152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74529913_74530444_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_81323.known	chr2	+	1323	9	FSM	ENSG00000115317.12	ENST00000467961.5	1323	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	59.6887761643678	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCCCTAAACTTAGGGGAG	74529752	False	NA	-69	True	NA	NA	NA	74529774	74533247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74529913_74530460_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_81333.known	chr2	+	1785	8	FSM	ENSG00000115317.12	ENST00000258080.8	1785	8	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_5	8.54280936441489	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTTGTGGGCAGTTAGTC	74529208	True	NA	3	True	ATTAAA	-19	NA	74529932	74533319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531596_74531703_74531855_74531926_74532618_74532715_74532819
transcript_81344.known	chr2	+	1771	7	FSM	ENSG00000115317.12	ENST00000484352.5	1771	7	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_4	8.85845484394554	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATCTTTTGTGGGCAGTTA	74530038	False	NA	0	True	ATTAAA	-16	NA	74530168	74533316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531703_74531855_74531926_74532618_74532715_74532819
transcript_81356.known	chr2	+	1918	5	FSM	ENSG00000115325.14	ENST00000233668.10	1918	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	8.74642784226795	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74553741	True	NA	24	True	ATTAAA	-20	NA	74554719	74557551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74555893_74556079_74556307
transcript_81360.known	chr2	+	1722	4	FSM	ENSG00000115325.14	ENST00000340004.6	1722	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	31.7525152109596	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATGTGTGTGAAGAGAA	74553752	True	NA	24	True	ATTAAA	-20	NA	74554730	74557551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74554815_74555153_74555454_74555574_74555669_74556307
transcript_81366.known	chr2	-	1581	12	FSM	ENSG00000115307.17	ENST00000425118.5	1581	12	0	0	0	0	multi-exon	TRUE	canonical	3	108	junction_2	269.74815312751	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTCTCTCTCGGTCTCAA	-74515431	True	NA	-18	True	ATTAAA	-26	NA	74529760	74526644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_81367.known	chr2	-	1458	12	FSM	ENSG00000115307.17	ENST00000377526.4	1458	12	0	0	0	0	multi-exon	FALSE	canonical	3	840	junction_9	85.6846997345211	1503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515377	True	NA	-25	True	ATTAAA	-19	NA	74529706	74526651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74528936_74529131_74529283_74529361_74529500_74529579
transcript_81368.known	chr2	-	1645	11	FSM	ENSG00000115307.17	ENST00000463900.5	1645	11	0	0	0	0	multi-exon	FALSE	canonical	3	877	junction_2	73.6266935289097	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCATCTGTTGTCTCTCTCG	-74515368	True	NA	-25	True	ATTAAA	-19	NA	74529697	74526651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527060_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_81369.known	chr2	-	1658	11	FSM	ENSG00000115307.17	ENST00000466894.5	1658	11	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	281.491030052469	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCCAATGTCACATTAAAT	-74515356	True	NA	-62	True	AAAAAG	-15	NA	74529685	74526688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74526837_74526940_74527122_74527247_74527364_74527470_74527591_74527735_74527839_74527939_74528007_74528247_74528322_74528416_74528490_74528750_74529283_74529361_74529500_74529579
transcript_81370.known	chr2	+	1479	7	FSM	ENSG00000115317.12	ENST00000437202.1	1479	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	78.487790982632	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGTGGGAGGGCTGGATC	74529321	False	NA	NA	False	AATAAA	-32	NA	74530045	74533192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74530513_74530616_74530822_74530910_74531106_74531338_74531372_74531566_74531703_74531855_74531926_74532819
transcript_81371.known	chr2	-	2544	11	FSM	ENSG00000159374.18	ENST00000421985.2	2544	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.2638350316493	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGCTTCAGATTACAC	-74647994	True	NA	0	True	AATAAA	-17	NA	74648330	74557882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74558875_74559697_74559710_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_81376.known	chr2	-	2531	10	FSM	ENSG00000159374.18	ENST00000536235.5	2531	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	14.1978958621896	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAACACCCTGTGCTTC	-74648002	True	NA	-9	True	AATAAA	-8	NA	74648338	74557891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74558875_74560150_74560292_74562216_74562424_74575437_74575580_74576455_74576619_74581673_74581848_74607054_74607224_74614963_74615150_74640035_74640328_74648264
transcript_81384.nnic	chr2	-	1286	3	NNC	ENSG00000287687.2	novel	816	3	NA	NA	22	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGAGTATAATTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	74778720	74750172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_74750577_74752066_74752200_74777971
transcript_81385.known	chr2	-	816	3	FSM	ENSG00000287687.2	ENST00000660620.1	816	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGTGAGTATAATTTGT	NA	False	NA	NA	False	AATAAA	-18	NA	74778742	74750172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74750577_74752066_74752200_74778463
transcript_81386.known	chr2	-	1333	1	FSM	ENSG00000272711.1	ENST00000610008.1	1333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGCCTCTCAGCAAAACT	-74833971	False	NA	-3	True	AATAAA	-17	NA	74833987	74832654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_74832700_74834000
transcript_81387.known	chr2	+	602	5	FSM	ENSG00000115350.12	ENST00000233699.8	602	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	157.041395816517	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGTGTGTTTTATAAT	74955795	False	NA	18	True	AATAAA	-18	NA	74958791	74969731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74958893_74959340_74959426_74959705_74959757_74960104_74960147_74969408
transcript_81391.known	chr2	+	1097	4	FSM	ENSG00000115350.12	ENST00000483063.2	1097	4	0	0	0	0	multi-exon	FALSE	canonical	3	310	junction_1	17.9133717900592	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTTAGGGTACATGTGCA	74955646	True	NA	NA	False	NA	NA	NA	74958642	74970128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74958893_74959340_74959426_74960104_74960147_74969408
transcript_81396.nnic	chr2	+	536	4	NNC	ENSG00000115350.12	novel	1097	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	158.929753874681	226	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCCAGTGTGTTTTATAAT	74955645	True	NA	18	True	AATAAA	-18	NA	74958641	74969731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_74958728_74959340_74959426_74960104_74960147_74969408
transcript_81399.known	chr2	+	528	4	FSM	ENSG00000115350.12	ENST00000465242.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	146.718172774276	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAACCTCAGTCCAGTGTGT	74958852	True	NA	10	True	AATAAA	-10	NA	74959005	74969723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_74959092_74959340_74959426_74960104_74960147_74969408
transcript_814.known	chr1	-	2757	19	FSM	ENSG00000188976.11	ENST00000327044.7	2757	19	0	0	0	0	multi-exon	TRUE	canonical	3	1103	junction_1	245.869658333209	613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGTGGCTCCTGGAGATTT	-940507	True	NA	-14	True	AATAAA	-29	NA	959256	944202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_944801_945056_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_81403.known	chr2	-	1828	4	FSM	ENSG00000115363.14	ENST00000393913.8	1828	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	2.35702260395516	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTGCATGTCCGTCTC	-75560798	True	NA	NA	False	AATAAA	-17	NA	75560939	75492317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75560679
transcript_81404.known	chr2	-	777	4	FSM	ENSG00000115363.14	ENST00000410071.5	777	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.68178700572909	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCTGCTAATATTGTGATT	-75561287	True	NA	NA	False	NA	NA	NA	75561298	75493150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75493610_75518055_75518209_75522364_75522488_75561256
transcript_81414.known	chr2	-	524	3	FSM	ENSG00000115363.14	ENST00000486489.1	524	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATTTTGTTTATCTCTCCC	NA	False	NA	-3	True	AATAAA	-16	NA	75561323	75558482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75558700_75560679_75560920_75561256
transcript_81415.known	chr2	-	4367	17	FSM	ENSG00000005436.14	ENST00000321027.8	4367	17	0	0	0	0	multi-exon	FALSE	canonical	3	82	junction_8	21.0586049810998	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGACTTAAACTGCTATAGT	-75709037	True	NA	-3	True	ATTAAA	-21	NA	75710915	75662704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75664784_75665928_75666054_75670137_75670285_75671949_75672017_75673443_75673521_75680192_75680315_75687826_75687978_75689025_75689226_75689968_75690082_75690637_75690720_75691976_75692101_75694240_75694428_75696199_75696316_75701189_75701288_75702198_75702424_75706522_75706652_75710590
transcript_8142.known	chr1	-	6971	17	FSM	ENSG00000156869.14	ENST00000646001.2	6971	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.06066017177982	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGACTATTGTATTAATATGA	-99765677	True	NA	NA	False	AATAAA	-18	NA	99766635	99703969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_99709121_99709197_99709260_99710805_99710950_99712104_99712164_99712417_99712516_99715585_99715673_99717409_99717526_99719533_99719648_99728492_99728641_99729649_99729749_99738085_99738269_99740792_99740941_99742178_99742274_99747293_99747431_99748572_99748769_99748896_99749002_99766606
transcript_81423.known	chr2	-	1066	3	FSM	ENSG00000005436.14	ENST00000470503.1	1066	3	0	0	0	0	multi-exon	FALSE	canonical	3	117	junction_1	11.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAAGCCTTAAAGGACTG	-75709021	True	NA	NA	False	AATAAA	-20	NA	75710899	75701795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_75702424_75706522_75706652_75710590
transcript_81431.known	chr2	+	1747	1	FSM	ENSG00000270696.1	ENST00000604845.1	1747	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	11	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGGATTTGATTTGCTA	75660446	False	NA	9	True	AATAAA	-22	NA	75660461	75662208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75660500_75662200
transcript_81432.known	chr2	+	1076	7	FSM	ENSG00000115364.14	ENST00000409374.5	1076	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	239.252597803149	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGTAACCATAATAAATTCT	75635541	True	NA	NA	False	CATAAA	-40	NA	75646802	75670753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75654735_75654918_75655063_75655303_75670578
transcript_81433.known	chr2	+	693	6	FSM	ENSG00000115364.14	ENST00000358788.10	693	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	294.663876306547	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAAAAGTAAAATGCT	75635532	True	NA	NA	False	AATAAA	-30	NA	75646793	75690759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_75646911_75647101_75647220_75652141_75652261_75652522_75652658_75679774_75679853_75690633
transcript_81442.nnic	chr2	-	799	2	NNC	ENSG00000176204.14	novel	596	2	NA	NA	10	562	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGAGGTTTAATTGACTCA	-77592715	True	NA	NA	False	TATAAA	-11	NA	77593309	77552003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_77552657_77593163
transcript_81445.nnic	chr2	+	1078	7	NNC	ENSG00000115386.6	novel	599	4	NA	NA	-9113	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.21335164821342	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGCTGTCTTACTGTGTC	79111211	True	NA	NA	False	AATAAA	-20	NA	79111248	79123409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_79111459_79111603_79111731_79120815_79120926_79121561_79121681_79121987_79122126_79122840_79122953_79123147
transcript_81448.nnic	chr2	+	821	4	NNC	ENSG00000066032.19	novel	3167	17	NA	NA	2	-13618	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	17.326921891156	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCTGACGTTTTGGATAC	79512596	True	NA	NA	False	AATAAA	-16	NA	79513001	79844448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_79513208_79651551_79651659_79744386_79744583_79844136
transcript_81452.nnic	chr2	-	806	3	NNC	ENSG00000231781.1	novel	488	5	NA	NA	-31	61596	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTATCTGGTAGTATCT	-82005713	False	NA	NA	False	AATAAA	-4	NA	82005731	81921675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_81922163_81986430_81986580_82005561
transcript_81456.known	chr2	-	1270	9	FSM	ENSG00000163541.12	ENST00000393868.7	1270	9	0	0	0	0	multi-exon	FALSE	canonical	3	360	junction_3	38.7967459975705	1350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGTTTTGGAGGCTTATT	-84455308	True	NA	-5	True	AATAAA	-19	NA	84459280	84423527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_81457.known	chr2	-	1328	10	FSM	ENSG00000163541.12	ENST00000651342.1	1328	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_4	185.230786977879	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAAATCTACTATTTGATTT	-84455313	True	NA	-28	True	NA	NA	NA	84459285	84423550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84423773_84425414_84425604_84431507_84431660_84433351_84433436_84436051_84436128_84441046_84441105_84441246_84441460_84443283_84443401_84449648_84449753_84459172
transcript_81461.known	chr2	-	1814	7	FSM	ENSG00000186854.11	ENST00000409520.7	1814	7	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	7.41619848709566	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTTTTTTTGTATAGATT	-84881073	False	121	-19	True	AATAAA	-27	NA	84881084	84821665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_81463.known	chr2	-	1844	6	FSM	ENSG00000186854.11	ENST00000335459.9	1844	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	9.34665715643834	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTTTATTCATGATATAT	-84881234	False	NA	-3	True	AATAAA	-43	NA	84881245	84821649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84822101_84823952_84824205_84832054_84832146_84839148_84839324_84870224_84870786_84880931
transcript_81465.known	chr2	-	1554	5	FSM	ENSG00000186854.11	ENST00000409133.1	1554	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	3.64005494464026	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATCTTGAGGCTCTGTGTA	-84881139	False	NA	NA	False	NA	NA	NA	84881150	84837789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84838242_84839148_84839324_84841860_84842008_84870224_84870786_84880931
transcript_8148.nnic	chr1	+	887	5	NNC	ENSG00000162688.17	novel	7179	34	NA	NA	-447	-12041	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	60.8948889480882	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	99849804	True	NA	9	True	ATTAAA	-18	NA	99849913	99864556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_99850102_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_81485.known	chr2	-	582	2	FSM	ENSG00000186854.11	ENST00000489999.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTGAGAATGTTTTG	-84906988	True	NA	NA	False	AATAAA	-19	NA	84907008	84901642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_84901879_84906662
transcript_81486.known	chr2	+	461	3	FSM	ENSG00000034510.6	ENST00000233143.6	461	3	0	0	0	0	multi-exon	FALSE	canonical	3	14371	junction_2	222.5	172902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCGTGGTCTGAGTC	84763150	True	NA	19	True	AATAAA	-16	NA	84905655	84906671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_84905719_84906002_84906118_84906388
transcript_81487.known	chr2	+	7500	7	FSM	ENSG00000176407.18	ENST00000409785.9	7500	7	0	0	0	0	multi-exon	FALSE	non_canonical	2	369	junction_4	108.804105314705	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGTTTCCATTGCATTC	84967657	True	NA	3	True	AATAAA	-15	NA	84971160	85059472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_84971468_85027888_85028057_85035015_85035156_85043563_85043666_85046103_85046279_85049365_85049649_85053147
transcript_8149.nic	chr1	+	1052	5	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-298	59464	-298	-12041	5prime_fragment	FALSE	canonical	3	121	junction_1	13.5646599662505	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	99847480	True	NA	9	True	ATTAAA	-18	NA	99850062	99864556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256_99862424_99864385
transcript_81491.known	chr2	-	2235	4	FSM	ENSG00000152291.15	ENST00000409232.7	2235	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	96.1491896308371	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATACTCAGTAGGAACTTT	-85327788	False	NA	-4	True	AATAAA	-33	NA	85328024	85321893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85322759_85324914_85324999_85326507_85327686_85327916
transcript_81492.known	chr2	+	2364	14	FSM	ENSG00000115459.18	ENST00000409013.8	2364	14	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	15.8356948306423	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354313	True	NA	5	True	AATAAA	-14	NA	85354768	85391748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85354830_85355075_85355171_85355554_85355599_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_81495.known	chr2	+	2332	13	FSM	ENSG00000115459.18	ENST00000393852.8	2332	13	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	10.6936507641996	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAAGCGTCTCAGGTGTTTT	85354301	True	NA	5	True	AATAAA	-14	NA	85354756	85391748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85354830_85355075_85355171_85356966_85357253_85362185_85362261_85363096_85363167_85368685_85368755_85369738_85369831_85371085_85371210_85371439_85371563_85377343_85377475_85389750_85389828_85390137_85390266_85390759
transcript_8150.nnic	chr1	+	981	5	NIC	ENSG00000162688.17	novel	7091	34	NA	NA	-287	-12041	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	60.4648658313239	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTATTACTGATGTTGTC	99847491	True	NA	9	True	ATTAAA	-18	NA	99850073	99864556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_99850416_99851034_99851125_99861502_99861714_99862256_99862424_99864385
transcript_81504.known	chr2	-	3141	11	FSM	ENSG00000042445.14	ENST00000295802.9	3141	11	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_4	6.99213844256534	125	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAAAGTGGGGTCTGCGCC	-85353903	True	NA	NA	False	AATAAA	-21	NA	85354528	85341954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85343382_85343638_85343799_85343998_85344166_85344238_85344349_85344593_85344733_85345974_85346095_85349383_85349582_85350039_85350242_85350779_85351022_85351679_85351863_85354335
transcript_8153.known	chr1	+	7446	34	FSM	ENSG00000162688.17	ENST00000294724.8	7446	34	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	27.6193461694567	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTTTGCTTTCATTCAT	99850477	False	NA	11	True	AATAAA	-18	NA	99850488	99924020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99850899_99850974_99851125_99861502_99861714_99862256_99862424_99864385_99864590_99870399_99870582_99870757_99870870_99874686_99874811_99875153_99875257_99875357_99875456_99876457_99876598_99877640_99877829_99879922_99880047_99880631_99880796_99881075_99881178_99881291_99881448_99881540_99881692_99884119_99884245_99884338_99884452_99884568_99884704_99887977_99888109_99891219_99891357_99891605_99891740_99892431_99892608_99896285_99896389_99900635_99900862_99902682_99902795_99910711_99910848_99912404_99912518_99913526_99913739_99915388_99915487_99916409_99916498_99916597_99916732_99921533
transcript_81530.nic	chr2	-	1247	10	NIC	ENSG00000042493.16	novel	1250	10	NA	NA	6	0	intron_retention	FALSE	canonical	2	23	junction_9	236.718512839591	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTTTTCCTGCACCACCT	-85409815	False	965	-23	True	AATAAA	-20	NA	85409826	85394766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85409765
transcript_81532.known	chr2	-	1250	10	FSM	ENSG00000042493.16	ENST00000263867.9	1250	10	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_9	202.912132050633	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCACCTGCCCTGGGCTGATT	-85410355	False	5105	-9	True	AATAAA	-34	NA	85410366	85394752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85410316
transcript_81534.known	chr2	-	1151	10	FSM	ENSG00000042493.16	ENST00000409724.5	1151	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	243.512313679576	1493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGGTGGGCGTCTTCCTGCCC	-85408969	True	NA	NA	False	NA	NA	NA	85414074	85394892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85394959_85395537_85395627_85398019_85398153_85398689_85398783_85399135_85399286_85401164_85401330_85401528_85401684_85401784_85401958_85402122_85402159_85413983
transcript_8155.nic	chr1	+	955	4	ISM	ENSG00000162688.17	ENST00000361915.8	7091	34	-298	61523	-298	-14100	5prime_fragment	FALSE	canonical	3	121	junction_1	14.7271480229163	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTGTATTAGTCCATT	99847480	True	NA	NA	False	AATAAA	-33	NA	99850062	99862497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_99850416_99850974_99851125_99861502_99861714_99862256
transcript_81580.known	chr2	-	1205	1	FSM	ENSG00000286532.1	ENST00000667933.1	1205	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGTGTGTAGGCTGGTCAG	-85538460	True	NA	NA	False	AATAAA	-20	NA	85538666	85537461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85537500_85538700
transcript_81581.known	chr2	-	7556	15	FSM	ENSG00000115486.13	ENST00000233838.9	7556	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_12	19.0194583497629	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAGGAGTTATTGTGCAG	-85559843	True	NA	-4	True	AATAAA	-16	NA	85561493	85544719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85560814_85560986_85561385
transcript_81585.known	chr2	-	2314	14	FSM	ENSG00000115486.13	ENST00000430215.7	2314	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_13	17.7830449133587	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGGCGGGGTTCTA	-85559882	True	NA	-108	True	NA	NA	NA	85561532	85549829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85550127_85550554_85550751_85550924_85551073_85551479_85551611_85551811_85551982_85552415_85552568_85552938_85553071_85553231_85553498_85554142_85554307_85555483_85555591_85556181_85556261_85558439_85558606_85558916_85559076_85561385
transcript_8159.nnic	chr1	+	2683	11	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	190.415361775252	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_100038317_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_81598.known	chr2	-	684	3	FSM	ENSG00000115486.13	ENST00000496962.2	657	3	-27	0	-15	0	multi-exon	FALSE	canonical	3	145	junction_1	7.5	601	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGTTTTATGTGATTATA	NA	False	NA	-9	True	ATTAAA	-18	NA	85561547	85558724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85559076_85560814_85560986_85561385
transcript_81599.known	chr2	-	600	2	FSM	ENSG00000115486.13	ENST00000481541.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGTGCTACCGGATAAGCT	-85559843	True	NA	NA	False	NA	NA	NA	85561493	85558583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85559076_85561385
transcript_816.nic	chr1	-	2802	19	NIC	ENSG00000188976.11	novel	2757	19	NA	NA	22	0	combination_of_known_junctions	FALSE	canonical	3	1001	junction_1	262.252211091198	652	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGGTGGCTCCTGGAGATT	-940538	True	NA	-15	True	AATAAA	-28	NA	959287	944203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_944801_945041_945147_945517_945654_946172_946287_946401_946546_948130_948233_948489_948604_951126_951239_951999_952140_952411_952601_953174_953289_953781_953893_954003_954083_955922_956014_956094_956216_956893_957026_957098_957274_958928_959082_959214
transcript_81600.known	chr2	+	2817	9	FSM	ENSG00000168906.13	ENST00000306434.8	2817	9	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_8	40.0398239256868	1647	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTGTTACTCATTTGT	85509763	True	NA	NA	False	AATAAA	-21	NA	85539167	85545281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85539379_85541082_85541161_85541254_85541378_85541632_85541746_85541828_85541973_85542154_85542374_85542564_85542748_85542900_85543035_85543669
transcript_81601.known	chr2	+	664	3	FSM	ENSG00000118640.11	ENST00000432071.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	329	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCAGTGGGTAATAAAGACC	NA	False	NA	-8	True	NA	NA	NA	85561561	85581997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85561645_85579008_85579168_85581575
transcript_81607.nnic	chr2	+	592	2	NIC	ENSG00000118640.11	novel	679	3	NA	NA	-72	0	combination_of_known_splicesites	FALSE	canonical	2	14	junction_1	0	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	NA	False	NA	26	True	AATAAA	-19	NA	85577513	85582031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_85577650_85581575
transcript_81608.known	chr2	+	679	3	FSM	ENSG00000118640.11	ENST00000263864.10	679	3	0	0	0	0	multi-exon	FALSE	canonical	3	658	junction_2	4.5	6669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571519	True	NA	26	True	AATAAA	-19	NA	85577585	85582031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85577650_85579008_85579168_85581575
transcript_81609.known	chr2	+	805	4	FSM	ENSG00000118640.11	ENST00000409760.1	805	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	313.485069642701	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTGTGAGGCACTTTCTC	85571526	True	NA	26	True	AATAAA	-19	NA	85577592	85582031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85577650_85579008_85579168_85579741_85579875_85581575
transcript_81615.nnic	chr2	+	1019	5	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-76	0	multi-exon	FALSE	canonical	3	4	junction_2	278.477108574475	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	28	True	ATTAAA	-15	NA	85577509	85593406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85579008_85579168_85581753_85581877_85591724_85591863_85592947
transcript_81616.nnic	chr2	+	962	5	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-76	0	multi-exon	FALSE	canonical	2	9	junction_2	277.667404460805	135	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	28	True	ATTAAA	-15	NA	85577509	85593406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85579008_85579168_85581810_85581877_85591724_85591863_85592947
transcript_81618.nnic	chr2	+	896	4	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	805	4	NA	NA	-76	0	multi-exon	FALSE	canonical	2	5	junction_2	300.15255380482	149	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	NA	False	NA	28	True	ATTAAA	-15	NA	85577509	85593406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85579008_85579168_85591724_85591863_85592947
transcript_81621.nnic	chr2	+	701	3	Fusion	ENSG00000118640.11_ENSG00000168899.5	novel	679	3	NA	NA	-40	0	multi-exon	FALSE	canonical	2	15	junction_1	22	165	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85571479	True	NA	28	True	ATTAAA	-15	NA	85577545	85593406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_85577650_85591724_85591863_85592947
transcript_81622.known	chr2	+	660	3	FSM	ENSG00000168899.5	ENST00000306384.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	12.5	405	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGAAGGTCCCCAGGTTGG	85583943	True	NA	28	True	ATTAAA	-15	NA	85584430	85593406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85584494_85591724_85591863_85592947
transcript_81629.known	chr2	+	685	5	FSM	ENSG00000168894.10	ENST00000306368.9	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	1633	junction_3	133.121185391357	12469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTGGACTCATGGCAGTG	85582296	True	NA	87	True	NA	NA	NA	85595744	85597708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103_85597179_85597444
transcript_81630.known	chr2	+	535	5	FSM	ENSG00000168894.10	ENST00000443647.5	535	5	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	786.163787006245	477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	85582307	True	NA	-17	True	ATTAAA	-39	NA	85595755	85597604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596856_85596932_85597103_85597179_85597444
transcript_81639.known	chr2	+	844	4	FSM	ENSG00000168894.10	ENST00000441634.5	844	4	0	0	0	0	multi-exon	FALSE	canonical	3	1633	junction_3	126.265153106029	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGCTGTATTGATCAC	85582276	True	NA	13	True	ATTAAA	-16	NA	85595724	85597581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596821_85596932_85597103
transcript_8164.known	chr1	+	14321	8	FSM	ENSG00000117620.15	ENST00000533028.8	14321	8	0	0	0	0	multi-exon	TRUE	canonical	3	59	junction_7	12.6797283174397	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCACCCAGTAAATATTTTTT	99967009	True	NA	NA	False	AATAAA	-16	NA	99969995	100035634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100007033_100007157_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_81642.known	chr2	+	559	4	FSM	ENSG00000168894.10	ENST00000456023.1	559	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	908.18732771506	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTCTGCATCCTCCATCA	85582368	False	NA	-8	True	NA	NA	NA	85595816	85597613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85595850_85596518_85596650_85596952_85597179_85597444
transcript_81646.nnic	chr2	+	417	4	NNC	ENSG00000168894.10	novel	535	5	NA	NA	-32	0	at_least_one_novel_splicesite	FALSE	canonical	3	131	junction_1	796.092121972493	948	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCCAGGGGCTCTGCAT	NA	False	NA	-17	True	ATTAAA	-39	NA	85595692	85597604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_85595850_85596906_85596932_85597103_85597179_85597444
transcript_8165.known	chr1	+	1777	7	FSM	ENSG00000117620.15	ENST00000640732.1	1777	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	31.8629879327096	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAATCAGATTAAGTCCTTA	99967043	True	NA	NA	False	NA	NA	NA	99970029	100023247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_99970163_99993536_99993742_99999260_99999416_100011364_100011534_100015301_100015421_100017681_100017816_100022385
transcript_81658.known	chr2	+	2034	14	FSM	ENSG00000168883.20	ENST00000409470.5	2034	14	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_13	153.714790070411	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85603791	True	NA	22	True	ATTAAA	-19	NA	85616168	85649280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760_85648854_85649016
transcript_81660.known	chr2	+	2161	13	FSM	ENSG00000168883.20	ENST00000613444.4	2161	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	198.950580128165	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTCTTGTTTTATATCTT	85611966	True	NA	24	True	ATTAAA	-21	NA	85612102	85649282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85612360_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_81662.known	chr2	+	2183	13	FSM	ENSG00000168883.20	ENST00000323701.11	2183	13	0	0	0	0	multi-exon	FALSE	canonical	3	598	junction_1	62.185877282011	437	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTTGTTTTATATCTTT	85603808	True	NA	25	True	ATTAAA	-22	NA	85616185	85649283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85616464_85619219_85619290_85621484_85621580_85623645_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_81677.known	chr2	-	1553	8	FSM	ENSG00000168890.14	ENST00000334462.10	1553	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	21.0082588230322	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTGTAGCCTGTTCTGGA	-85591389	False	11309	0	True	ATTAAA	-17	NA	85602698	85598546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_81684.known	chr2	-	1810	7	FSM	ENSG00000168890.14	ENST00000444380.5	1810	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	22.4629324295234	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTTTATATTAAAAGAAT	-85591350	False	11309	-31	True	NA	NA	NA	85602659	85598577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601483_85601883_85602065_85602606
transcript_81686.known	chr2	-	1484	7	FSM	ENSG00000168890.14	ENST00000306353.7	1484	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	36.8631101358647	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGTAGCCTGTTCTGG	-85591389	False	11309	-1	True	ATTAAA	-16	NA	85602698	85598547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85601020_85601108_85601434_85601483_85601883_85602065_85602606
transcript_8169.known	chr1	-	655	2	FSM	ENSG00000228084.2	ENST00000454219.2	726	2	71	0	71	0	multi-exon	FALSE	canonical	1	1	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCGGGTATGTCTTTATC	-99969805	False	NA	-3	True	ATTAAA	-17	NA	99969864	99968382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_99968478_99969304
transcript_8170.known	chr1	-	3848	17	FSM	ENSG00000156876.10	ENST00000287482.6	3848	17	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_12	11.5427195668958	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACTTTGAAAATCAAGTACT	-100131559	True	NA	-36	True	AATAAA	-18	NA	100132930	100083569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100107718_100107809_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_81700.known	chr2	-	976	3	FSM	ENSG00000168887.11	ENST00000423181.1	976	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	132.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACGTTTGTTATTTTATG	-85600757	True	NA	NA	False	NA	NA	NA	85612066	85608566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85609068_85609434_85609587_85611743
transcript_81701.known	chr2	+	2148	13	FSM	ENSG00000168883.20	ENST00000459775.5	2148	13	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	260.95320727841	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGCCTCTTGTTTTATATC	85602701	True	NA	22	True	ATTAAA	-19	NA	85602855	85649280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_85603082_85619219_85619290_85621484_85621580_85623625_85623783_85625538_85625692_85630720_85630947_85636052_85636131_85637368_85637437_85639202_85639392_85640975_85641119_85644947_85645084_85647929_85648017_85648760
transcript_81702.known	chr2	-	4274	4	FSM	ENSG00000168887.11	ENST00000306336.6	4274	4	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_2	27.0102861065105	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTTGCCAAGAGTTGT	-85600757	True	NA	-10	True	AATAAA	-19	NA	85612066	85605253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85609068_85609434_85609587_85611667_85611787_85611877
transcript_81703.known	chr2	-	1776	7	FSM	ENSG00000168890.14	ENST00000409668.1	1776	7	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	22.5511763674438	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTACTTTTTTTTATATTAA	-85591107	False	NA	-37	True	NA	NA	NA	85602416	85598583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_85599318_85599524_85599703_85599890_85600019_85600344_85600413_85601020_85601108_85601434_85601483_85601883
transcript_81704.known	chr2	-	1427	10	FSM	ENSG00000068654.17	ENST00000486964.5	1427	10	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_7	22.1281341506159	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATAAGCCTACTGGAATT	-86101582	True	NA	NA	False	AATAAA	-23	NA	86105873	86078040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_81705.known	chr2	-	6454	34	FSM	ENSG00000068654.17	ENST00000409681.1	6454	34	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	38.1041779160192	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTCCCTTGGTTTGCAG	-86106144	True	NA	-18	True	AAGAAA	-26	NA	86106155	86026327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86027524_86027884_86028050_86028593_86028712_86030195_86030397_86031512_86031636_86032271_86032383_86033660_86033788_86038699_86038858_86039326_86039463_86040391_86040560_86041888_86042104_86042973_86043196_86044138_86044305_86045277_86045361_86045616_86045770_86047164_86047264_86048883_86049043_86049159_86049243_86052816_86053001_86054139_86054290_86065273_86065466_86070017_86070273_86075029_86075261_86077858_86077982_86078113_86078285_86080815_86080979_86081600_86081707_86083081_86083169_86088565_86088670_86088784_86088871_86089821_86089930_86098610_86098761_86099967_86100173_86105699
transcript_81712.known	chr2	+	6681	24	FSM	ENSG00000132300.19	ENST00000254630.12	6681	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_15	152.020257828258	469	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGGTGGCTCACACCTGTA	86094357	True	NA	7	True	AATAAA	-14	NA	86106234	86142157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86106352_86108349_86108403_86108499_86108537_86111112_86111159_86116529_86116599_86117054_86117160_86118920_86119045_86121478_86121595_86123700_86123763_86124994_86125083_86125454_86125516_86125794_86125881_86127160_86127306_86127940_86127992_86130647_86130738_86131077_86131107_86132317_86132425_86133177_86133257_86133345_86133437_86134291_86134378_86134838_86134988_86136520_86136563_86136981_86137141_86137468
transcript_8172.nnic	chr1	+	2936	13	NIC	ENSG00000156875.14	novel	2779	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	68	junction_2	213.681031758398	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_100038317_100043072_100043230_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_8173.known	chr1	+	2779	12	FSM	ENSG00000156875.14	ENST00000370152.8	2779	12	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_11	47.8204285680268	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGATCTGTGAGTTCCT	100033207	True	NA	31	True	AATAAA	-34	NA	100038094	100083377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100038317_100049908_100050005_100058665_100058729_100059877_100060006_100061834_100061950_100067976_100068196_100068472_100068587_100069613_100069686_100077164_100077278_100078450_100078549_100080495_100080660_100082002
transcript_81744.known	chr2	+	587	3	FSM	ENSG00000132300.19	ENST00000473829.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	3	710	junction_1	2	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGACAGCAAAATTTAGCTT	86094366	True	NA	NA	False	AATAAA	-11	NA	86106243	86108925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86106352_86108349_86108403_86108499
transcript_81746.known	chr2	-	2670	15	FSM	ENSG00000132305.22	ENST00000449247.6	2670	15	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	125.086602652983	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCTTATCCCTTTTCAAA	-86190734	True	NA	-7	True	AATAAA	-20	NA	86195472	86143931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170845_86171207_86171313_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_81747.known	chr2	-	2627	15	FSM	ENSG00000132305.22	ENST00000442664.6	2627	15	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_10	173.333052066752	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTATCTTATCCCTTTT	-86195317	False	NA	-11	True	AATAAA	-16	NA	86195403	86143935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86144882_86146067_86146198_86147701_86147834_86151296_86151521_86153559_86153575_86158591_86158722_86159535_86159672_86161975_86162080_86166507_86166645_86170748_86170842_86171207_86171346_86173649_86173762_86179432_86179623_86181298_86181373_86195337
transcript_81750.known	chr2	+	1061	5	FSM	ENSG00000132313.15	ENST00000254644.12	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_4	138.592929112563	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGATGTTCGATTAT	86199324	False	NA	NA	False	AATAAA	-22	NA	86199354	86212838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86212425
transcript_81752.known	chr2	+	651	5	FSM	ENSG00000132313.15	ENST00000409180.1	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_4	115.648983998996	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTTTCTGCCGATGATTT	86197421	True	NA	-37	True	NA	NA	NA	86199462	86213738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479_86210614_86213627
transcript_81755.known	chr2	+	3723	4	FSM	ENSG00000132313.15	ENST00000337109.9	3723	4	0	0	0	0	multi-exon	FALSE	canonical	3	333	junction_3	3.2659863237109	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTTGTAGTTGTGTGATGA	86197415	True	NA	15	True	AATAAA	-15	NA	86199456	86213790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86207182_86207328_86210479
transcript_81758.known	chr2	+	833	3	FSM	ENSG00000132313.15	ENST00000605125.5	833	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	167.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACCCCATCTCCCACTCAG	86197415	True	NA	NA	False	NA	NA	NA	86199456	86211045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86199534_86206105_86206296_86210479
transcript_81760.known	chr2	+	4667	26	FSM	ENSG00000115548.17	ENST00000312912.10	4667	26	0	0	0	0	multi-exon	TRUE	canonical	3	99	junction_7	24.2289083534525	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGGCTCAGTTTATTGGC	86438345	True	NA	14	True	ATTAAA	-15	NA	86441370	86492716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_86441445_86442017_86442234_86449806_86449963_86451102_86451214_86455084_86455188_86456441_86456567_86456804_86456878_86456982_86457072_86464052_86464217_86466371_86466884_86470203_86470409_86474775_86474991_86477876_86478030_86478169_86478266_86478607_86478736_86480166_86480363_86481929_86482103_86482457_86482695_86483986_86484159_86484941_86485030_86485728_86485860_86489317_86489438_86489519_86489660_86490880_86491058_86491140_86491276_86492038
transcript_81762.nnic	chr2	+	645	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-54	-6597	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	57	194	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGATTATATGTTGATTTC	86438291	True	NA	11	True	AATAAA	-24	NA	86441316	86443290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_81763.nnic	chr2	+	1297	3	NNC	ENSG00000115548.17	novel	8741	22	NA	NA	-54	-5945	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_2	57	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTTATGTGATTTGA	86438291	True	NA	15	True	AATAAA	-16	NA	86441316	86443942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_86441445_86442017_86442234_86442989
transcript_81779.known	chr2	-	1099	5	FSM	ENSG00000115561.16	ENST00000409225.2	1099	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	53.8580309703205	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCATTGTAGATTGCCCTG	-86561922	True	NA	0	True	AATAAA	-20	NA	86563479	86505443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86563303
transcript_81784.known	chr2	-	3138	6	FSM	ENSG00000115561.16	ENST00000263856.9	3138	6	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.88767014308903	562	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTGTCTCGTTTGACTG	-86561886	True	NA	1	True	AATAAA	-28	NA	86563443	86503429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510480_86529217_86529398_86542251_86542313_86563303
transcript_81785.known	chr2	-	1851	6	FSM	ENSG00000115561.16	ENST00000409727.5	1851	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	51.2913248025434	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-86561817	True	NA	NA	False	NA	NA	NA	86563374	86504527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86505950_86507478_86507594_86510357_86510430_86529287_86529398_86542251_86542313_86563303
transcript_81786.known	chr2	-	436	3	FSM	ENSG00000115561.16	ENST00000466032.1	436	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	58.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAAGCTCCTTTAATACA	NA	False	NA	NA	False	TATAAA	-19	NA	86542313	86527047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86527242_86529217_86529398_86542251
transcript_81787.known	chr2	-	832	6	FSM	ENSG00000172116.23	ENST00000331469.6	832	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.93907194296653	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCCCTCGCTCAGAGGGAT	-86861899	False	NA	NA	False	NA	NA	NA	86861915	86815556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_86815719_86844921_86844959_86846683_86846774_86852996_86853087_86858056_86858417_86861822
transcript_81788.known	chr2	-	2217	11	FSM	ENSG00000285793.1	ENST00000648819.1	2217	11	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_3	135.092708907624	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGTGTTTTGGTTTGA	-87073675	True	NA	NA	False	AATAAA	-20	NA	87076429	87030674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_87030908_87031815_87031899_87032068_87032204_87034151_87034244_87037293_87037529_87043712_87043985_87047187_87047307_87049588_87049804_87052813_87052993_87055657_87055801_87075918
transcript_81790.known	chr2	+	1277	4	FSM	ENSG00000287931.1	ENST00000667385.1	1277	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTATTATTGTTCTGTCAGT	87075640	True	NA	NA	False	AATAAA	-21	NA	87075652	87118267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87075747_87094190_87094422_87116534_87116585_87117365
transcript_81791.known	chr2	+	772	4	FSM	ENSG00000222041.12	ENST00000414584.1	772	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	87455418	False	NA	NA	False	ATTAAA	-23	NA	87455495	87521518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455646_87478121_87478231_87480222_87480424_87521206
transcript_81792.known	chr2	+	594	3	FSM	ENSG00000222041.12	ENST00000643589.1	594	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	31.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CTAAAGAAAACAGAATTGTT	NA	False	NA	NA	False	ATTAAA	-8	NA	87455237	87521503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455453_87455563_87455646_87521206
transcript_81793.nic	chr2	+	683	3	NIC	ENSG00000222041.12	novel	772	4	NA	NA	0	0	combination_of_known_junctions	TRUE	canonical	2	3	junction_1	1	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	87455398	False	NA	NA	False	ATTAAA	-23	NA	87455475	87521518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_87455646_87480222_87480424_87521206
transcript_81794.known	chr2	+	529	2	FSM	ENSG00000222041.12	ENST00000331944.10	529	2	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	0	728	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	87455351	True	NA	NA	False	ATTAAA	-23	NA	87455428	87521518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_87455646_87521206
transcript_81795.nnic	chr2	+	828	6	NNC	ENSG00000234231.4	novel	2070	15	NA	NA	27170	1109	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	153.603906200331	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGAATTCAGAAATAAAATAA	NA	False	NA	NA	False	NA	NA	NA	87728153	87739214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_87728239_87732386_87732622_87735673_87735766_87737717_87737853_87738022_87738106_87739016
transcript_81800.nnic	chr2	+	2151	3	NNC	ENSG00000287670.1	novel	939	2	NA	NA	5	1372	at_least_one_novel_splicesite	FALSE	non_canonical	2	14	junction_2	2.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	88016744	True	NA	6	True	ATTAAA	-16	NA	88017021	88022823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_88017292_88020695_88021450_88021696
transcript_81801.known	chr2	+	845	2	FSM	ENSG00000287670.1	ENST00000662935.1	845	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAGATCGAGACCATCCCGG	NA	False	NA	NA	False	ATTAAA	-18	NA	88016779	88021451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88016869_88020695
transcript_81804.known	chr2	+	939	2	FSM	ENSG00000287670.1	ENST00000662952.1	939	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTCCTATTAATAATAGATT	88016893	False	NA	NA	False	TTTAAA	-39	NA	88017016	88021359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88017292_88020695
transcript_81806.nnic	chr2	-	1838	4	NNC	ENSG00000172086.9	novel	1807	4	NA	NA	-92	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	34.2928563989645	59	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	NA	False	NA	-5	True	AATAAA	-16	NA	88055875	88027204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_88028586_88034133_88034232_88036942_88037052_88055625
transcript_81807.known	chr2	-	1807	4	FSM	ENSG00000172086.9	ENST00000347055.4	1807	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	6.18241233033047	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGTTGTTGTGTGTCAGTC	-88054206	True	NA	-5	True	AATAAA	-16	NA	88055783	88027204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_88028586_88034133_88034293_88036942_88037052_88055625
transcript_81810.known	chr2	-	1208	2	FSM	ENSG00000172071.15	ENST00000668866.1	1208	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCGTGTCCTTCGTTTTGTA	-88691396	True	NA	NA	False	NA	NA	NA	88691464	88690176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_88691316_88691395
transcript_81813.known	chr2	+	1614	2	FSM	ENSG00000234028.4	ENST00000453008.3	1616	2	0	2	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTACTTTTGTGTCTTAC	88627518	False	NA	13	True	AATAAA	-14	NA	88627538	88631819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88628733_88631399
transcript_81817.known	chr2	+	1813	9	FSM	ENSG00000153574.9	ENST00000283646.5	1813	9	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_3	19.0262975904404	1720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	88686398	True	NA	6	True	AATAAA	-15	NA	88691672	88750929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_88691984_88698483_88698545_88700008_88700065_88729277_88729338_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_81825.nnic	chr2	+	1775	8	NIC	ENSG00000153574.9	novel	1813	9	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	3	19	junction_3	85.7811643851102	1292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGACTCTTTTGTCTTTA	88686376	True	NA	6	True	AATAAA	-15	NA	88691650	88750929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_88691984_88698483_88698545_88700008_88700065_88734551_88734617_88735668_88735738_88736534_88736677_88737976_88738077_88749980
transcript_81835.known	chr2	-	523	1	FSM	ENSG00000211592.8	ENST00000390237.2	523	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTTCTCTCTTTCCTCATT	NA	False	NA	-1	True	AATAAA	-23	NA	88857683	88857160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_88857200_88857700
transcript_81838.known	chr2	-	622	4	FSM	ENSG00000283196.2	ENST00000636560.1	622	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	9.46337971105226	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGACTGAATGCTGTG	NA	False	NA	NA	False	AATAAA	-20	NA	89585608	89562334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_89562685_89580557_89580636_89581005_89581141_89585549
transcript_8184.nic	chr1	-	832	6	ISM	ENSG00000156876.10	ENST00000462159.1	3972	16	-142	36831	-142	-36824	5prime_fragment	FALSE	canonical	3	62	junction_1	7.91454357496375	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAATTCAAATTTCATTTTG	-100133044	True	NA	NA	False	NA	NA	NA	100133097	100120393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_81840.known	chr2	-	1196	3	FSM	ENSG00000283196.2	ENST00000636531.1	1196	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	9	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAGCATGAGTCAGATCCCG	NA	False	NA	NA	False	ATTAAA	-13	NA	89585615	89542841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_89543837_89581005_89581141_89585549
transcript_81841.known	chr2	-	774	3	FSM	ENSG00000283196.2	ENST00000637196.1	774	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	8.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGGATGATGTGAGCATCC	NA	False	NA	NA	False	GGGGCT	-15	NA	89585596	89562092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_89562685_89581005_89581141_89585549
transcript_81846.nnic	chr2	+	856	3	Fusion	ENSG00000211633.3_ENSG00000242580.1	novel	532	2	NA	NA	-17	388	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAAATTTCATGTTTTAT	NA	False	NA	NA	False	AATAAA	-15	NA	90190175	90210917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_90190268_90210028_90210109_90210233
transcript_81848.known	chr2	+	1084	4	FSM	ENSG00000172005.11	ENST00000309988.9	1084	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACATTTGTTGGGTGTTTTT	NA	False	NA	NA	False	TATAAA	-17	NA	95025707	95053992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95025886_95047958_95048127_95049580_95049707_95053380
transcript_81853.known	chr2	-	3298	12	FSM	ENSG00000144029.12	ENST00000272418.7	3298	12	0	0	0	0	multi-exon	TRUE	canonical	3	654	junction_5	98.9962850960071	1049	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCTGTACTTACTATCTG	-95117194	True	NA	NA	False	AATAAA	-33	NA	95121808	95085368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95104639_95104731_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_81865.known	chr2	-	1359	11	FSM	ENSG00000144029.12	ENST00000345084.9	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_5	227.702788740059	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTTGTTGAGCACATGTTAT	-95117185	True	NA	-20	True	AATAAA	-15	NA	95121799	95087207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95087582_95090385_95090523_95100473_95100537_95100836_95100895_95101676_95101724_95106422_95106458_95108174_95108409_95109915_95110042_95115065_95115204_95117864_95117946_95121733
transcript_8187.known	chr1	-	3972	16	FSM	ENSG00000156876.10	ENST00000462159.1	3972	16	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_11	11.2652859114479	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATCAAGTACTTCAAAAC	-100131584	True	NA	-29	True	AATAAA	-25	NA	100132955	100083562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100085435_100085535_100085631_100088138_100088237_100102954_100103084_100105766_100105904_100106911_100106994_100107373_100107554_100107627_100108005_100110291_100110484_100119017_100119138_100120393_100120460_100121377_100121550_100122379_100122485_100123209_100123290_100125881_100125943_100132749
transcript_8188.known	chr1	+	3130	11	FSM	ENSG00000122435.11	ENST00000370141.8	3128	11	0	-2	0	2	multi-exon	FALSE	canonical	3	45	junction_6	8.46404158779953	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTCATTTATGTTTGAT	100131908	True	NA	9	True	AATAAA	-20	NA	100133162	100150498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_81880.nic	chr2	-	580	4	ISM	ENSG00000144029.12	ENST00000475895.5	1672	7	-199	6207	-199	5162	5prime_fragment	FALSE	canonical	3	809	junction_3	34.1792659696229	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAAAAGAAAGGATCTGA	-95121794	False	NA	NA	False	AAAAAG	-23	NA	95122012	95109959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_95110042_95115065_95115204_95117864_95117946_95121733
transcript_81882.known	chr2	+	3580	5	FSM	ENSG00000275111.5	ENST00000614034.5	3580	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	2.87228132326901	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGCTGATGACTGTCC	95165451	True	NA	5	True	AATAAA	-17	NA	95165808	95184317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95165861_95176187_95176260_95177482_95177610_95180158_95180273_95181102
transcript_81883.nic	chr2	+	480	4	ISM	ENSG00000275111.5	ENST00000611147.1	1465	5	-30	1806	-2	-1806	5prime_fragment	FALSE	canonical	3	12	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTCTTCTGCTTTATT	95165685	False	NA	NA	False	NA	NA	NA	95165786	95180365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_95165861_95176187_95176260_95177482_95177610_95180158
transcript_81893.known	chr2	+	1366	9	FSM	ENSG00000115042.10	ENST00000447036.5	1366	9	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_1	121.268039895102	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397393	True	NA	-24	True	NA	NA	NA	95402722	95413096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95402873_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_81898.nic	chr2	+	1515	9	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	3	23	junction_1	143.684060963629	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	95397364	True	NA	-24	True	NA	NA	NA	95402693	95413096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_81903.known	chr2	+	4775	8	FSM	ENSG00000115042.10	ENST00000233379.9	4775	8	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_1	72.9607107018733	2055	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTGGTCTGGCTTGCTGT	95397378	True	NA	20	True	AATAAA	-30	NA	95402707	95416616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95402873_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_81907.nic	chr2	+	1408	8	NIC	ENSG00000115042.10	novel	1366	9	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	38	junction_1	131.709327455482	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCTCTTCAATAAATTCGT	NA	False	NA	-24	True	NA	NA	NA	95402674	95413096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_95402993_95405552_95405804_95406940_95407158_95410526_95410587_95410863_95411027_95412433_95412543_95412676_95412765_95412894
transcript_81954.known	chr2	+	715	4	FSM	ENSG00000115042.10	ENST00000418606.1	715	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	140.646918044995	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGAGCCCATCATCTTCAG	95397461	True	NA	NA	False	NA	NA	NA	95402790	95407076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_95402993_95405276_95405403_95405552_95405804_95406940
transcript_8196.nic	chr1	+	1541	11	NIC	ENSG00000122435.11	novel	3128	11	NA	NA	-6	-1564	combination_of_known_junctions	FALSE	canonical	3	33	junction_5	11.3846387733648	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCTGTGGCCTCATTAAACT	100131889	True	NA	NA	False	AATATA	-36	NA	100133143	100148932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140449_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147893_100148327_100148624
transcript_81965.known	chr2	-	2351	2	FSM	ENSG00000232931.6	ENST00000448494.1	2351	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCATGTTCTAATCATTG	NA	False	NA	NA	False	AATATA	-15	NA	95816215	95807117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95807303_95814049
transcript_81966.known	chr2	-	737	3	FSM	ENSG00000174501.15	ENST00000619511.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	6	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAACTGTCTAAGATTTTAC	-95991813	False	NA	NA	False	AATGAA	-17	NA	95991831	95986622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_95986925_95987091_95987207_95991511
transcript_81991.nnic	chr2	+	1831	6	FSM	ENSG00000231584.9	ENST00000691870.1	1824	6	-10	3	0	0	multi-exon	FALSE	canonical	3	23	junction_1	87.6045660910435	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010498	True	NA	15	True	AGTAAA	-21	NA	96010534	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96015108_96015326_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_81993.nnic	chr2	+	1494	6	FSM	ENSG00000231584.9	ENST00000692364.1	1465	6	-29	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	26.424231303862	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010498	True	NA	15	True	AGTAAA	-21	NA	96010534	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96015108_96015326_96019537_96019701_96021124_96021234_96021367_96021466_96022673
transcript_81999.nnic	chr2	+	912	6	FSM	ENSG00000231584.9	ENST00000689101.1	912	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	48.4297429272549	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	96010508	True	NA	NA	False	AATAAA	-21	NA	96010544	96021834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019261_96019480_96019701_96021124_96021234_96021367_96021466_96021597
transcript_82.known	ERCC-00170	+	1007	1	FSM	ERCC-00170A	DQ516773	1007	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	136	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	1007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00170_+_0_1000
transcript_82000.nnic	chr2	+	1384	6	FSM	ENSG00000231584.9	ENST00000689599.1	1381	6	-6	3	0	0	multi-exon	FALSE	canonical	2	10	junction_2	26.3028515564378	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010508	True	NA	15	True	AGTAAA	-21	NA	96010544	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019261_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_82006.nnic	chr2	+	926	6	NIC	ENSG00000231584.9	novel	912	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	50.510988903406	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	96010508	True	NA	NA	False	AATAAA	-21	NA	96010544	96021834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_96010733_96019200_96019275_96019480_96019701_96021124_96021234_96021367_96021466_96021597
transcript_82010.nnic	chr2	+	1462	6	FSM	ENSG00000231584.9	ENST00000690506.1	1467	6	0	5	0	0	multi-exon	FALSE	canonical	1	4	junction_5	27.8452868543314	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010508	True	NA	13	True	AGTAAA	-19	NA	96010544	96023380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_82015.nnic	chr2	+	859	5	FSM	ENSG00000231584.9	ENST00000692100.1	801	5	-58	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	52.4785670536077	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	96010498	True	NA	NA	False	AATAAA	-21	NA	96010534	96021834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96015108_96015326_96021124_96021234_96021367_96021466_96021597
transcript_82016.nnic	chr2	+	1331	5	FSM	ENSG00000231584.9	ENST00000687200.1	1338	5	3	4	0	0	multi-exon	FALSE	canonical	2	11	junction_2	20.2175666191557	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010498	True	NA	15	True	AGTAAA	-21	NA	96010534	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96015108_96015326_96021124_96021234_96021367_96021466_96022673
transcript_82017.known	chr2	+	893	5	FSM	ENSG00000231584.9	ENST00000692942.1	980	5	82	5	1	0	multi-exon	FALSE	canonical	1	4	junction_4	25.4693443182191	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010577	True	NA	13	True	AGTAAA	-19	NA	96010613	96023380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673_96022754_96022893
transcript_82021.nnic	chr2	+	1604	5	FSM	ENSG00000231584.9	ENST00000690531.1	1620	5	13	3	0	0	multi-exon	FALSE	canonical	3	19	junction_1	23.1678656764062	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010508	True	NA	15	True	AGTAAA	-21	NA	96010544	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019200_96019701_96021124_96021234_96021367_96021466_96022673
transcript_82023.nnic	chr2	+	1316	5	FSM	ENSG00000231584.9	ENST00000687567.1	1318	5	0	2	0	0	multi-exon	FALSE	canonical	2	4	junction_1	28.5514885776556	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010516	True	NA	15	True	AGTAAA	-21	NA	96010552	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96019480_96019701_96021124_96021234_96021367_96021466_96022673
transcript_82024.nnic	chr2	+	1254	5	NIC	ENSG00000231584.9	novel	1465	6	NA	NA	0	0	intron_retention	FALSE	canonical	0	0	junction_1	30.0613955098562	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGCTTTCTGCTCAATCGC	96010521	True	NA	15	True	AGTAAA	-21	NA	96010557	96023382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_96010733_96019537_96019701_96021124_96021234_96021367_96021466_96022673
transcript_8203.nnic	chr1	+	1140	10	NNC	ENSG00000122435.11	novel	3128	11	NA	NA	-7	2805	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	20.3384935771471	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTCTGTTCTGACGCCCTC	100131888	True	NA	NA	False	AATAAA	-43	NA	100133142	100147372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140851_100141020_100143136_100143210_100144068_100144144_100147075
transcript_82031.nic	chr2	+	634	4	FSM	ENSG00000231584.9	ENST00000686031.1	623	4	-11	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	57.3488351136175	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTCTGCTGTTTGT	96010506	True	NA	NA	False	AATAAA	-21	NA	96010542	96021834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96021597
transcript_82032.known	chr2	+	965	4	FSM	ENSG00000231584.9	ENST00000467292.7	1139	4	25	149	0	-127	multi-exon	FALSE	canonical	2	5	junction_1	24.5673676969177	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCAGCTCCCCACCGCCTC	96010514	True	NA	NA	False	NA	NA	NA	96010550	96023249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021234_96021367_96021466_96022673
transcript_82034.nnic	chr2	+	1140	3	FSM	ENSG00000231584.9	ENST00000686623.1	1140	3	-5	5	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCAGCTTTCTGCTCAATC	96010506	True	NA	13	True	AGTAAA	-19	NA	96010542	96023380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96010733_96021124_96021368_96022673
transcript_82037.known	chr2	-	2761	22	FSM	ENSG00000186281.13	ENST00000359548.8	2761	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.09627280316394	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTTTGGTGTATGTGTGT	-96034902	True	NA	NA	False	GATAAA	-43	NA	96034916	96021945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96022276_96022667_96022724_96022957_96023024_96023105_96023227_96023308_96023441_96023922_96024001_96024188_96024338_96024426_96024668_96024772_96024844_96025484_96025604_96025929_96026013_96026182_96026306_96026696_96026910_96027006_96027107_96027418_96027553_96027990_96028091_96030405_96030535_96030743_96030849_96031260_96031335_96032032_96032147_96032296_96032420_96034816
transcript_82038.known	chr2	-	3696	1	FSM	ENSG00000274286.2	ENST00000620793.2	3696	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGTGGTGTCCTTGTTGC	-96116089	True	NA	44	True	AATAAA	-17	NA	96116571	96112875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96112900_96116600
transcript_82039.known	chr2	-	2394	9	FSM	ENSG00000188886.4	ENST00000342380.3	2394	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	2.86956007081225	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCCCACCTCCTGTGTGC	-96138489	False	50	-7	True	AATAAA	-20	NA	96138502	96122817	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96124272_96129823_96129979_96130063_96130146_96132539_96132722_96133424_96133543_96133964_96134059_96135350_96135413_96137574_96137701_96138381
transcript_82040.known	chr2	-	3377	8	FSM	ENSG00000084090.14	ENST00000337288.10	3377	8	0	0	0	0	multi-exon	FALSE	canonical	3	1648	junction_7	94.4887424457517	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96192739	True	NA	-5	True	AATAAA	-26	NA	96208827	96184858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208144
transcript_82041.nic	chr2	-	3010	8	NIC	ENSG00000084090.14	novel	3377	8	NA	NA	-27	0	combination_of_known_junctions	FALSE	canonical	3	80	junction_7	600.826199868963	369	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTGTCTTTGGACAAAT	-96192766	True	NA	-5	True	AATAAA	-26	NA	96208854	96184858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_96186915_96187216_96187302_96192368_96192469_96193077_96193161_96193241_96193353_96194957_96195008_96195340_96195550_96208538
transcript_82042.known	chr2	+	1527	3	FSM	ENSG00000204685.8	ENST00000446816.2	1565	3	9	29	9	1	multi-exon	FALSE	canonical	1	2	junction_1	1.5	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAATAAATTCCTTTCTTC	96208026	True	NA	-19	True	NA	NA	NA	96208415	96242594	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96208980_96240443_96240689_96241876
transcript_82043.known	chr2	+	3968	7	FSM	ENSG00000144021.3	ENST00000488633.2	3968	7	0	0	0	0	multi-exon	FALSE	canonical	3	632	junction_5	45.7726871495315	945	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAACCTGAGTTTCTTAG	96257742	True	NA	56	True	AATAAA	-30	NA	96266224	96274173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96266490_96267320_96267470_96267624_96267737_96267835_96267925_96268456_96268659_96269267_96269356_96271110
transcript_82064.nic	chr2	-	1329	5	ISM	ENSG00000144028.15	ENST00000323853.10	7194	45	-25	26095	-25	-15216	5prime_fragment	FALSE	canonical	3	685	junction_2	25.9326049597799	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAAAGTTAAAGTACAGT	-96272658	True	NA	NA	False	AATATA	-39	NA	96305571	96300432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_82065.nic	chr2	-	667	4	ISM	ENSG00000144028.15	ENST00000323853.10	7194	45	-25	27227	-25	-16348	5prime_fragment	FALSE	canonical	3	685	junction_1	24.4176620957499	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACAGACTATGGTGGAG	-96272658	True	NA	NA	False	NA	NA	NA	96305571	96301564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_96301717_96303158_96303331_96304704_96304869_96305392
transcript_82066.known	chr2	-	740	2	FSM	ENSG00000230747.1	ENST00000421534.1	740	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAGATTTCAATAACTTTC	-96321683	False	NA	NA	False	AATAAA	-16	NA	96321731	96307262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96307407_96321135
transcript_82067.known	chr2	-	7194	45	FSM	ENSG00000144028.15	ENST00000323853.10	7194	45	0	0	0	0	multi-exon	TRUE	canonical	3	586	junction_38	166.881142131679	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTCCGACTGTCTTCAA	-96272633	True	NA	-1	True	AATAAA	-17	NA	96305546	96274337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96275156_96275256_96275350_96276903_96276986_96277080_96277242_96277538_96277716_96277806_96277951_96278236_96278359_96278546_96278712_96278808_96278999_96279450_96279560_96281813_96281923_96283200_96283353_96283534_96283714_96283812_96284005_96284357_96284586_96285179_96285341_96286310_96286485_96286687_96286878_96287005_96287161_96287438_96287558_96287862_96287970_96288662_96288747_96289036_96289118_96289226_96289380_96289798_96289997_96290325_96290515_96290683_96290816_96291391_96291503_96291750_96291901_96292971_96293096_96293315_96293510_96295487_96295659_96296535_96296692_96296932_96297071_96297362_96297537_96297636_96297721_96298283_96298421_96298602_96298703_96298814_96298968_96299328_96299428_96300997_96301054_96301523_96301717_96303158_96303331_96304704_96304869_96305392
transcript_82068.known	chr2	+	2064	3	FSM	ENSG00000198885.10	ENST00000439118.3	2064	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	3.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	96324384	True	NA	33	True	ATTAAA	-39	NA	96325316	96328353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96325566_96325746_96325850_96326641
transcript_82069.known	chr2	+	1947	2	FSM	ENSG00000198885.10	ENST00000536814.1	1947	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGTTTACTTTTCAG	96324398	True	NA	33	True	ATTAAA	-39	NA	96325330	96328353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96325566_96326641
transcript_82070.known	chr2	+	6030	18	FSM	ENSG00000121152.10	ENST00000240423.9	6030	18	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_1	33.730562774017	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATGTTGCCTTTTTTTTT	96331721	True	NA	5	True	AATAAA	-17	NA	96335765	96377091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_82071.nic	chr2	+	2697	18	NIC	ENSG00000121152.10	novel	6030	18	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	26	junction_13	58.473961318258	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331685	True	NA	-13	True	TATAAA	-23	NA	96335729	96373815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_96335849_96341641_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365968_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_82073.nic	chr2	+	2745	18	NIC	ENSG00000121152.10	novel	2952	18	NA	NA	-24	0	combination_of_known_junctions	FALSE	canonical	3	105	junction_1	38.4798513762426	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAATTCTTAATAATAGAAC	96331697	True	NA	-13	True	TATAAA	-23	NA	96335741	96373815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_96335849_96341674_96341895_96342049_96342141_96342755_96342849_96343165_96343305_96344104_96344230_96351830_96352021_96353305_96353398_96354182_96354389_96359044_96359194_96360142_96360250_96360587_96360711_96364480_96364592_96365875_96366059_96367256_96367374_96368971_96369064_96369424_96369501_96373291
transcript_82085.nnic	chr2	-	510	3	NNC	ENSG00000235480.1	novel	440	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAAGGAAGTCCCTC	NA	False	NA	NA	False	AATAAA	-21	NA	96532346	96527939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_96528184_96529733_96529850_96532196
transcript_82086.known	chr2	-	440	3	FSM	ENSG00000235480.1	ENST00000425578.1	440	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTGTAAGGAAGTCCCTC	-96532280	False	NA	NA	False	AATAAA	-21	NA	96532306	96527939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96528184_96529733_96529850_96532226
transcript_82087.known	chr2	+	2181	7	FSM	ENSG00000196843.17	ENST00000357485.8	2181	7	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_3	8.03464719546263	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTAGCCCTGAGGTGTGTGT	96536053	True	NA	19	True	AATAAA	-21	NA	96536751	96552634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96536831_96547401_96547518_96549320_96549460_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_82088.known	chr2	+	2038	6	FSM	ENSG00000196843.17	ENST00000412735.5	2038	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	18.7893586904929	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCACGTAGCCCTGAGGTGT	96536053	True	NA	15	True	AATAAA	-17	NA	96536751	96552630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_96536831_96547401_96547518_96549752_96549806_96550187_96550286_96550573_96550734_96551098
transcript_82091.known	chr2	-	1448	12	FSM	ENSG00000114982.19	ENST00000452268.5	1448	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_9	53.4251619921203	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGTGGATTCTCCCAGAG	-96635799	True	NA	NA	False	NA	NA	NA	96638331	96610725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96610884_96611063_96611139_96612281_96612354_96612461_96612564_96612817_96612935_96613487_96613620_96619358_96619545_96619671_96619763_96631311_96631483_96634148_96634179_96636920_96637186_96638282
transcript_82092.known	chr2	-	2020	9	FSM	ENSG00000114988.12	ENST00000377079.8	2020	9	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	84.0862652280383	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTTTTGTAGTTACGAT	-96736714	True	NA	NA	False	NA	NA	NA	96740064	96706339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96713106_96713140_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_82093.known	chr2	-	2410	9	FSM	ENSG00000114988.12	ENST00000434524.5	2410	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	86.6238275533932	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTCTGTAGCCTAAATGAAA	-96736691	True	NA	-50	True	NA	NA	NA	96740041	96705974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737136_96737218_96737948_96738068_96739853
transcript_82095.known	chr2	-	2398	8	FSM	ENSG00000114988.12	ENST00000264963.9	2398	8	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_6	17.1106840951518	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-96736714	True	NA	-4	True	AATGAA	-28	NA	96740064	96705928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96737948_96738068_96739853
transcript_82097.known	chr2	-	1163	7	FSM	ENSG00000114988.12	ENST00000434865.5	1163	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	71.0797673978561	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAATGCTGCTGTGATGTG	-96736713	True	NA	NA	False	NA	NA	NA	96740063	96707043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96733518_96733602_96734408_96734527_96739853
transcript_82098.nic	chr2	-	2327	7	NIC	ENSG00000114988.12	novel	2398	8	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	12	junction_4	72.4670423173336	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTTCTGACTGTGTT	-96736726	True	NA	-4	True	AATGAA	-28	NA	96740076	96705928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96737948_96738068_96739853
transcript_82099.known	chr2	-	1008	6	FSM	ENSG00000114988.12	ENST00000440610.5	1008	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_5	94.1522171804785	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCAGGGACCCCGCATTCC	-96736714	True	NA	NA	False	NA	NA	NA	96740064	96707116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96707399_96707713_96707834_96711655_96711771_96711863_96712026_96734408_96734527_96739853
transcript_82112.known	chr2	-	892	4	FSM	ENSG00000213337.9	ENST00000393537.5	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	293	junction_3	24.5266295188629	1521	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAACTATGTAAGTATTAG	-96855012	True	NA	-5	True	ATTAAA	-19	NA	96858016	96847989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_96848445_96853400_96853605_96854337_96854442_96857887
transcript_82113.nnic	chr2	-	1064	6	NNC	ENSG00000168754.15	novel	2698	17	NA	NA	-9007	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	1.16619037896906	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGTTTAGAACACTTC	-96907111	False	NA	-2	True	ATTAAA	-15	NA	96907140	96875884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_96876309_96877889_96878043_96878415_96878494_96893925_96894052_96902619_96902708_96906945
transcript_82115.nnic	chr2	-	694	4	NNC	ENSG00000168754.15	novel	2698	17	NA	NA	13436	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	1.4142135623731	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGTGGTTTAGAACACTTC	NA	False	NA	-2	True	ATTAAA	-15	NA	96881706	96875884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_96876309_96877889_96878043_96878415_96878494_96881667
transcript_82122.known	chr2	-	1431	9	FSM	ENSG00000144199.12	ENST00000414820.6	1431	9	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_8	70.9831626162148	2305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97093019	True	NA	-24	True	AATAAA	-21	NA	97094882	97083582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97091862_97091989_97094700
transcript_82145.known	chr2	-	1305	8	FSM	ENSG00000144199.12	ENST00000272610.3	1305	8	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_7	105.762151325799	1921	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGGCTTGTGCTGTTTGT	-97093019	True	NA	-24	True	AATAAA	-21	NA	97094882	97083582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97083818_97083947_97084036_97084168_97084278_97085698_97085862_97086138_97086199_97090108_97090326_97091461_97091713_97094700
transcript_82146.known	chr2	+	986	3	FSM	ENSG00000135976.21	ENST00000452478.2	986	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	8	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTAATCAGTGTGAAGTGA	97113307	True	NA	NA	False	ACTAAA	-10	NA	97113551	97118829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97113937_97118063_97118179_97118343
transcript_82148.nic	chr2	-	1165	3	ISM	ENSG00000196912.13	ENST00000419390.2	1169	15	-155	33202	-93	-33202	5prime_fragment	FALSE	canonical	3	34	junction_1	1.5	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGTGTTGTATGTGAAGGT	-97589912	False	NA	NA	False	AATAAA	-22	NA	97589970	97584513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_97585118_97585283_97585399_97589524
transcript_8215.nnic	chr1	+	1148	9	NNC	ENSG00000122435.11	novel	1582	8	NA	NA	-3	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	19.1507180022056	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	100131892	True	NA	NA	False	AATAAA	-9	NA	100133146	100144567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100140515_100140966_100141020_100143136_100143210_100144068
transcript_82151.known	chr2	+	613	5	FSM	ENSG00000135940.7	ENST00000464949.5	613	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	3461.87004197154	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATAGATGGCTGGTCTTATTT	97594306	True	NA	36	True	AGTAAA	-30	NA	97646096	97648191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97646190_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_82152.known	chr2	+	611	5	FSM	ENSG00000135940.7	ENST00000491989.1	611	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3465.12063282074	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTTCTCCCATAGATGG	97646278	False	NA	24	True	AGTAAA	-18	NA	97646288	97648179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97646392_97646516_97646667_97647066_97647141_97647343_97647444_97647995
transcript_82165.known	chr2	+	690	4	FSM	ENSG00000135940.7	ENST00000258424.3	690	4	0	0	0	0	multi-exon	FALSE	canonical	3	6550	junction_3	306.31465303943	21540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGAAAGGGGCGGGCTGAGG	97594271	True	NA	NA	False	AATAGA	-42	NA	97646061	97648383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_97646190_97647066_97647141_97647343_97647444_97647995
transcript_82166.known	chr2	-	2204	11	FSM	ENSG00000115073.8	ENST00000289228.7	2204	11	0	0	0	0	multi-exon	TRUE	canonical	3	102	junction_6	20.2829978060444	306	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTGCTATCGTTTGTT	-97662152	True	NA	0	True	NA	NA	NA	97664044	97655938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97656961_97657151_97657193_97657447_97657510_97657942_97658118_97658223_97658317_97658426_97658644_97658878_97659004_97659351_97659478_97660570_97660647_97661881_97661947_97663842
transcript_8217.nnic	chr1	+	1110	9	NNC	ENSG00000122435.11	novel	1582	8	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_6	20.4843690408077	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	100131888	True	NA	NA	False	AATAAA	-9	NA	100133142	100144567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140449_100140515_100140966_100141020_100143136_100143210_100144068
transcript_82170.known	chr2	-	6701	41	FSM	ENSG00000075568.17	ENST00000186436.10	6701	41	0	0	0	0	multi-exon	TRUE	canonical	3	52	junction_20	9.19116423528597	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTGTTTTGTGGTTTTTT	-97993293	True	NA	-2	True	AATAAA	-18	NA	97995948	97756335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_97757384_97758892_97759054_97759651_97759750_97760592_97760690_97760792_97760915_97762034_97762201_97766113_97766264_97766477_97766603_97772296_97772425_97775842_97776019_97792385_97792985_97793394_97793554_97794929_97795116_97796217_97796405_97796843_97796987_97797364_97797517_97801894_97801962_97802427_97802538_97802651_97802791_97805087_97805206_97805375_97805452_97805550_97805704_97809687_97809775_97811127_97811233_97812420_97812556_97812638_97812750_97813970_97814142_97814234_97814389_97815198_97815308_97818612_97818722_97833364_97833427_97834620_97834678_97834774_97834926_97837076_97837158_97841814_97841938_97844144_97844262_97859303_97859428_97888051_97888121_97908657_97908699_97927425_97927488_97995475
transcript_82182.known	chr2	-	1770	3	FSM	ENSG00000183513.9	ENST00000328709.8	1770	3	0	0	0	0	multi-exon	FALSE	canonical	3	484	junction_2	58.5	2456	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCAATTCAGTGTTTTT	-98603060	True	NA	NA	False	AATACA	-25	NA	98608512	98599313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_98600794_98604107_98604192_98608306
transcript_8219.known	chr1	+	1582	8	FSM	ENSG00000122435.11	ENST00000482437.5	1582	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	6.55588223176215	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAATCTAAGAT	100131910	True	NA	NA	False	AATAAA	-9	NA	100133164	100144567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100133316_100136881_100136929_100137018_100137086_100139648_100139712_100140181_100140252_100140407_100141020_100143136_100143210_100144068
transcript_82201.nic	chr2	+	1218	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-53	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_5	212.352537069845	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599451	True	NA	NA	False	AATAAA	-17	NA	98608525	98618515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618145
transcript_82202.known	chr2	+	1133	6	FSM	ENSG00000115446.12	ENST00000357765.7	1133	6	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_4	40.293920136914	5378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599514	True	NA	NA	False	AATAAA	-17	NA	98608588	98618515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98608727_98609755_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_82212.nnic	chr2	+	1281	6	NIC	ENSG00000115446.12	novel	1133	6	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_1	218.510045535669	461	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599479	True	NA	NA	False	AATAAA	-17	NA	98608553	98618515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_98608727_98609642_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_82237.known	chr2	+	2172	5	FSM	ENSG00000115446.12	ENST00000409975.5	2172	5	0	0	0	0	multi-exon	FALSE	canonical	3	481	junction_3	44.8274469493858	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATGTGTGTTCACTCTAAT	98599504	True	NA	NA	False	AATAAA	-17	NA	98608578	98618515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98610040_98610774_98610896_98616206_98616347_98616431_98616534_98618167
transcript_82238.known	chr2	+	482	2	FSM	ENSG00000115446.12	ENST00000466492.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	554	junction_1	0	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATGTGTGTTCACTCT	98616380	False	NA	NA	False	AATAAA	-14	NA	98616396	98618512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_98616534_98618167
transcript_82239.known	chr2	-	8388	16	FSM	ENSG00000071073.13	ENST00000393487.6	8388	16	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_10	5.38722769355651	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTAGTATTTTATTATTA	-98730848	True	NA	0	True	AATAAA	-17	NA	98731132	98619105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_98625593_98625722_98625836_98635221_98635289_98636516_98636596_98639807_98640002_98640120_98640229_98643922_98644054_98645427_98645543_98655444_98655521_98656351_98656466_98658217_98658265_98663045_98663180_98675034_98675176_98678303_98678472_98726238_98726568_98731047
transcript_82240.nic	chr2	-	675	2	ISM	ENSG00000071073.13	ENST00000460768.1	426	3	0	47518	0	0	5prime_fragment	FALSE	canonical	3	29	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTTCTTTTTACTAAAC	-98730809	True	NA	NA	False	AATAAA	-17	NA	98731093	98725938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_98726568_98731047
transcript_8225.known	chr1	-	10799	11	FSM	ENSG00000137992.15	ENST00000370132.8	10799	11	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	8.28009661779378	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTAGTGTCTCCACTGTTGA	-100247650	True	NA	-2	True	AATAAA	-20	NA	100249834	100186918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100196423_100206229_100206302_100206444_100206637_100210693_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_82254.nic	chr2	-	1234	8	ISM	ENSG00000135951.16	ENST00000355053.8	3037	20	-129	107456	-129	4061	5prime_fragment	FALSE	canonical	2	5	junction_4	3.64215679542342	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-99141520	False	NA	NA	False	NA	NA	NA	99141701	99105341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109513_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_82256.nic	chr2	-	1114	8	NIC	ENSG00000135951.16	novel	3160	17	NA	NA	-12	4061	combination_of_known_junctions	TRUE	canonical	3	8	junction_4	2.91372543633873	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-99141011	False	NA	NA	False	NA	NA	NA	99141192	99105341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141082
transcript_82258.nic	chr2	-	1278	8	NIC	ENSG00000135951.16	novel	2390	17	NA	NA	-129	4061	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	2.87139303460597	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAAAGTCTCTTTTGGCTAT	-99141520	False	NA	NA	False	NA	NA	NA	99141701	99105341	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_99105437_99105526_99105698_99108832_99108992_99109388_99109557_99110849_99110916_99117543_99117760_99127047_99127177_99141427
transcript_82278.nic	chr2	-	1964	3	ISM	ENSG00000135951.16	ENST00000489926.6	588	5	-43	6632	-12	1093	5prime_fragment	FALSE	canonical	3	11	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATTGAAGTCACTGTTA	-99141011	False	NA	NA	False	AATAAA	-23	NA	99141192	99116034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_99117760_99127047_99127177_99141082
transcript_82286.known	chr2	-	255	3	FSM	ENSG00000135951.16	ENST00000483914.5	255	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154733	True	NA	0	True	AATAAA	-16	NA	99154869	99148263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99148349_99154290_99154428_99154836
transcript_82287.known	chr2	-	2492	2	FSM	ENSG00000135951.16	ENST00000464459.1	2492	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAATAGAAAAAAATTAGC	-99140728	True	NA	NA	False	NA	NA	NA	99141149	99124766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99127177_99141067
transcript_82288.known	chr2	-	283	2	FSM	ENSG00000135951.16	ENST00000465216.1	283	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTTTCTCTTTTTCTTA	-99154754	True	NA	0	True	AATAAA	-16	NA	99154890	99148263	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99148349_99154692
transcript_82289.known	chr2	-	390	3	FSM	ENSG00000135951.16	ENST00000489348.1	390	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	2	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTCTCTTTTTCTT	-99154725	True	NA	-1	True	AATAAA	-15	NA	99154861	99148264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99148349_99154290_99154428_99154692
transcript_8229.known	chr1	-	1521	8	FSM	ENSG00000137992.15	ENST00000370131.3	1521	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	25.5502705764658	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CATTGTTGTTGTTTTTGTGT	-100247636	True	NA	NA	False	ATTAAA	-35	NA	100249820	100210542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100211125_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_82292.nic	chr2	+	1702	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	-266	191	-266	-191	multi-exon	FALSE	canonical	3	21	junction_3	6.34209919681348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAGTCCAAGCAAT	99141413	True	NA	NA	False	NA	NA	NA	99141440	99151478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_82294.known	chr2	+	1058	5	FSM	ENSG00000273045.7	ENST00000409684.2	1058	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	12.3970762682174	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGATTTCTCTGGTATTA	99141292	True	NA	NA	False	AAAAAG	-16	NA	99141749	99151047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99141938_99142284_99142402_99147026_99147123_99147401_99147494_99150482
transcript_82298.known	chr2	+	1627	4	FSM	ENSG00000273045.7	ENST00000650052.2	1627	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	6.34209919681348	178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCACATTTTAAATCGTGC	99141249	True	NA	26	True	AATAAA	-38	NA	99141706	99151669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99141938_99142284_99142402_99147401_99147494_99150482
transcript_8230.nic	chr1	-	1239	8	ISM	ENSG00000137992.15	ENST00000370132.8	10799	11	-54	23621	-54	3	5prime_fragment	FALSE	canonical	3	62	junction_5	6.76123403782813	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTTTTTGTGTTAA	-100247704	True	NA	NA	False	ATTAAA	-38	NA	100249888	100210539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_100210772_100214816_100214984_100215982_100216200_100218625_100218748_100230732_100230915_100235435_100235512_100240760_100240885_100249769
transcript_82312.nnic	chr2	+	1051	7	NNC	ENSG00000185414.20	novel	4435	6	NA	NA	-107	12	at_least_one_novel_splicesite	FALSE	canonical	3	61	junction_6	129.037462260642	897	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAGTTTTAATTCCATAG	NA	False	NA	13	True	AATAAA	-16	NA	99181044	99197435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195757_99197153
transcript_8233.nic	chr1	-	586	4	ISM	ENSG00000137992.15	ENST00000370131.3	1521	8	-68	20105	-54	-20105	5prime_fragment	FALSE	canonical	3	62	junction_1	2.35702260395516	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTGTTTTTTTTTTTTCT	-100247704	True	NA	NA	False	ATTAAA	-14	NA	100249888	100230647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_100230915_100235435_100235512_100240760_100240885_100249769
transcript_82331.known	chr2	+	567	6	FSM	ENSG00000185414.20	ENST00000473743.5	567	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	190.772534710844	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTTGATAAGGTTTGTTGT	99175163	True	NA	NA	False	NA	NA	NA	99181151	99195178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99186176_99186255_99186918_99187019_99188176_99188258_99194750_99194898_99195115
transcript_82332.known	chr2	+	4435	6	FSM	ENSG00000185414.20	ENST00000338148.8	4435	6	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	49.847768254958	881	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTAGTTTTCCGTATTACC	99175195	True	NA	23	True	AATAAA	-20	NA	99181183	99199561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572
transcript_8234.known	chr1	-	2663	3	FSM	ENSG00000224616.4	ENST00000666916.1	2663	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTAAAGTAACAAAATAGAAA	-100265851	True	NA	NA	False	ATTAAA	-25	NA	100266134	100262804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100265248_100265828_100265918_100266003
transcript_82345.nic	chr2	+	694	5	ISM	ENSG00000185414.20	ENST00000338148.8	4435	6	-139	4263	-107	120	5prime_fragment	FALSE	canonical	3	318	junction_2	50.2810849127184	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATTTTGTTTTTTTTTA	NA	False	NA	NA	False	ACTAAA	-2	NA	99181044	99195298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750_99194898_99195115
transcript_82353.known	chr2	+	803	4	FSM	ENSG00000144182.17	ENST00000415142.1	803	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	12.5521135891752	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCATGATATGGGTAATAT	99154186	True	NA	NA	False	TATAAA	-35	NA	99155073	99162275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155369_99155481_99155545_99156300_99156427_99161956
transcript_82355.known	chr2	+	562	4	FSM	ENSG00000185414.20	ENST00000409145.5	562	4	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_2	43.4587927428578	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGCTTTGTTGTTGTTGT	99175197	True	NA	NA	False	NA	NA	NA	99181185	99195089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99186176_99186255_99188176_99188258_99194750
transcript_82359.known	chr2	+	1424	3	FSM	ENSG00000144182.17	ENST00000393473.6	1424	3	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	1	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGTCTCTTTTAGTAACG	NA	False	NA	40	True	AATAAA	-37	NA	99154954	99163157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99156300_99156427_99161956
transcript_82361.known	chr2	+	885	3	FSM	ENSG00000144182.17	ENST00000434566.5	885	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGACACTGTTTCCTGGA	99154097	True	NA	NA	False	AATAAA	-9	NA	99154984	99162711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99155481_99155545_99161956
transcript_82369.known	chr2	+	482	2	FSM	ENSG00000144182.17	ENST00000449211.1	482	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGAATGCTGTCCAACCC	99154089	True	NA	NA	False	AAAAAG	-38	NA	99154976	99162363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155052_99161956
transcript_8237.known	chr1	-	7681	2	FSM	ENSG00000224616.4	ENST00000670421.2	7697	2	16	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTATAACAATAATAAAAAA	-100265837	True	NA	NA	False	NA	NA	NA	100266120	100258353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100265918_100266003
transcript_82370.known	chr2	+	583	2	FSM	ENSG00000144182.17	ENST00000436234.1	583	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGTCTATCAAAATCTGGCT	99154193	True	NA	NA	False	AGTAAA	-33	NA	99155080	99162075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99155545_99161956
transcript_82371.known	chr2	-	939	7	FSM	ENSG00000158411.11	ENST00000289359.6	939	7	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_4	26.9485105752103	2324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179133	True	NA	-14	True	AATAAA	-19	NA	99181058	99169262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99169471_99169549_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173914_99174017_99180830
transcript_82372.known	chr2	-	1083	7	FSM	ENSG00000158411.11	ENST00000413710.2	1083	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_5	132.091403538947	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGGATCCATCATTCAG	-99179109	True	NA	-14	True	AATAAA	-19	NA	99181034	99169262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99169611_99170536_99170653_99171342_99171430_99171509_99171647_99173413_99173503_99173914_99174017_99180830
transcript_82373.known	chr2	+	1752	5	FSM	ENSG00000185414.20	ENST00000465432.1	1752	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	213.761987967927	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACCAGATCCCATTAATAA	99175222	True	NA	-23	True	NA	NA	NA	99181210	99197399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99181250_99194750_99194898_99195115_99195190_99195572_99196023_99196357
transcript_82374.known	chr2	+	1497	6	FSM	ENSG00000185414.20	ENST00000409841.1	1497	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	164.815533248538	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTAAAGGCAACTGCAGTT	99186157	False	NA	1	True	AATAAA	-4	NA	99186175	99197423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99186255_99188176_99188258_99194750_99194898_99195115_99195190_99195572_99195824_99196558
transcript_82376.nnic	chr2	-	969	7	NIC	ENSG00000185674.10	novel	964	7	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	2.54405625374562	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCATTTCCCAATTTTCTGA	-99255644	True	NA	NA	False	ATTAAA	-15	NA	99255666	99242245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_99242483_99243998_99244138_99245261_99245459_99246679_99246821_99254217_99254291_99255019_99255138_99255602
transcript_82377.known	chr2	-	862	6	ISM	ENSG00000185674.10	ENST00000333017.7	964	7	559	8	32	-8	3prime_fragment	FALSE	canonical	0	0	junction_1	2.78567765543682	3	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAATTCATTTCCCAA	-99255085	False	NA	NA	False	ATTAAA	-7	NA	99255107	99242253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_99242483_99243998_99244138_99245261_99245459_99246679_99246821_99254217_99254286_99255019
transcript_82380.known	chr2	+	5741	24	FSM	ENSG00000158417.11	ENST00000289371.11	5741	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	157.391964927751	2348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGATTCCACCGATTGCTGC	99321477	True	NA	4	True	AATAAA	-21	NA	99337388	99401326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644_99363863_99364270_99364422_99368492_99368592_99369391_99369482_99371655_99371731_99376346_99376637_99379018_99379127_99379317_99379429_99382158_99382227_99382779_99382922_99389717_99389850_99390218_99390402_99390543_99390706_99392966_99393099_99394266_99394399_99394508_99394586_99394718_99394884_99396759_99396899_99398747_99398910_99399306
transcript_82398.nic	chr2	+	1415	5	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-94	36403	-94	-26828	5prime_fragment	FALSE	canonical	3	605	junction_4	111.231740074495	3410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGTTTTCATGAAGTTGG	NA	False	NA	74	True	TATAAA	-38	NA	99337276	99363862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147_99361821_99363644
transcript_82409.nic	chr2	+	1125	4	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-22	38445	-22	-28870	5prime_fragment	FALSE	canonical	3	723	junction_2	88.9356821279038	936	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGTTAATACTTTAGAGG	99337322	False	NA	NA	False	NA	NA	NA	99337348	99361820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_99337590_99360235_99360362_99360464_99360550_99361147
transcript_8241.known	chr1	+	1534	12	FSM	ENSG00000137996.13	ENST00000260563.4	1534	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	81.6293781178126	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAAATACATTTTTCTTTT	100259654	True	NA	NA	False	AATAAA	-18	NA	100266248	100291771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100266421_100266523_100266625_100267499_100267539_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_82415.nic	chr2	+	365	2	ISM	ENSG00000158417.11	ENST00000617677.1	4698	25	-43	39927	-43	-30352	5prime_fragment	FALSE	canonical	3	916	junction_1	0	1912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAAAGCAGGACTT	NA	False	NA	48	True	AAAAAG	-7	NA	99337327	99360338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_99337590_99360235
transcript_82417.known	chr2	-	1111	4	FSM	ENSG00000115514.12	ENST00000409434.5	1111	4	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_3	15.1070255914995	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATATTTTAAAATACTAG	-99328218	True	NA	-2	True	AATAAA	-28	NA	99336333	99321533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99322210_99327534_99327654_99333021_99333243_99336238
transcript_82418.known	chr2	-	1508	5	FSM	ENSG00000115514.12	ENST00000264255.8	1508	5	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_1	76.6138858171285	1806	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGTTTTTCAAGAAAGTCAA	-99328218	True	NA	44	True	CATAAA	-20	NA	99336333	99318981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99319800_99321954_99322210_99327534_99327654_99333021_99333243_99336238
transcript_82419.known	chr2	-	1352	4	FSM	ENSG00000135945.10	ENST00000473819.1	1352	4	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	12.4721912892465	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGAAACAGTCATGCTTGAT	NA	False	NA	NA	False	ATTAAA	-12	NA	99462788	99438573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99439311_99442316_99442470_99449335_99449505_99462495
transcript_82420.known	chr2	-	599	2	FSM	ENSG00000115514.12	ENST00000465183.1	599	2	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAATGGAGGGCTAGGGAG	-99328241	True	NA	NA	False	AAGAAA	-42	NA	99336356	99332761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_99333243_99336238
transcript_82424.known	chr2	-	2854	7	FSM	ENSG00000115526.11	ENST00000264249.8	2854	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	31.3408678884296	192	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGAGCTGCGGTTCTGGGA	-100416034	True	NA	-4	True	AATAAA	-20	NA	100417668	100391859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_100393783_100395508_100395615_100397907_100398143_100402563_100402656_100406575_100406708_100415040_100415112_100417373
transcript_82429.known	chr2	+	1038	6	FSM	ENSG00000115539.14	ENST00000264254.11	1038	6	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	94.0008510599771	3734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCATTTATATTT	100556436	True	NA	29	True	ATTAAA	-26	NA	100562992	100576739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_100563074_100566502_100566630_100568930_100569022_100569577_100569722_100571589_100571799_100576353
transcript_82430.known	chr2	+	657	5	FSM	ENSG00000115539.14	ENST00000416255.5	657	5	0	0	0	0	multi-exon	FALSE	canonical	2	22	junction_1	476.869151340281	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGAAGTTTCCTGATGT	100563201	True	NA	NA	False	GATAAA	-20	NA	100563257	100571632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_100563510_100566502_100566630_100568930_100569022_100569577_100569722_100571589
transcript_82431.nnic	chr2	-	550	2	Intergenic	novelGene_25	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGGGTGGTCTAT	-101252494	True	NA	NA	False	AATAAA	-20	NA	101252709	101250582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_101250908_101252484
transcript_82432.nnic	chr2	-	446	2	NNC	ENSG00000204634.13	novel	561	5	NA	NA	-16	-62599	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTACATTGGGTGGTCTAT	-101252858	False	NA	NA	False	AATAAA	-20	NA	101252882	101250582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_101250908_101252761
transcript_82449.known	chr2	+	1291	5	FSM	ENSG00000071082.11	ENST00000264258.8	1291	5	0	0	0	0	multi-exon	FALSE	canonical	3	9528	junction_4	2951.79711150682	95302	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAAAGCATGGTTTGTA	100847305	True	NA	13	True	ATTAAA	-16	NA	101002288	101007267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101006349
transcript_82451.known	chr2	+	817	5	FSM	ENSG00000071082.11	ENST00000409038.5	817	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	6678.61446615239	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCTCTTTCAGTTATCAA	100847309	True	NA	NA	False	AATATA	-7	NA	101002292	101018306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017858
transcript_82453.known	chr2	+	770	5	FSM	ENSG00000071082.11	ENST00000409650.5	770	5	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_4	6669.46832120072	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTAATATAATGTCATGT	100847309	True	NA	NA	False	NA	NA	NA	101002292	101018289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101017888
transcript_82455.known	chr2	+	1110	5	FSM	ENSG00000071082.11	ENST00000409028.8	1110	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_4	6652.01046207085	847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTAGAAATAAACTTATTT	100847299	True	NA	NA	False	AATAAA	-20	NA	101002282	101019728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958_101006072_101018997
transcript_8247.known	chr1	+	2526	11	FSM	ENSG00000137996.13	ENST00000370128.9	2526	11	0	0	0	0	multi-exon	FALSE	canonical	3	190	junction_2	12.7455874717488	845	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCTTTCATTATTCTCTG	100259621	True	NA	21	True	AATAAA	-21	NA	100266215	100292769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100266421_100266523_100266625_100268151_100268296_100270556_100270681_100273393_100273453_100274823_100274966_100275598_100275724_100277257_100277317_100285227_100285323_100287098_100287204_100291402
transcript_82477.known	chr2	+	716	4	FSM	ENSG00000071082.11	ENST00000409320.7	716	4	0	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2155.28064684548	3336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCATGTTTTTGTTCTTTT	100847309	True	NA	26	True	AATAAA	-14	NA	101002292	101006418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157_101004284_101005958
transcript_82490.known	chr2	+	641	3	FSM	ENSG00000071082.11	ENST00000409000.5	641	3	0	0	0	0	multi-exon	FALSE	canonical	3	11807	junction_1	2023	955	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGGAGGGGTGAGGGTCGC	100847245	True	NA	NA	False	AATAAA	-21	NA	101002228	101004604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002316_101002701_101002809_101004157
transcript_82492.known	chr2	+	825	4	FSM	ENSG00000071082.11	ENST00000409733.5	825	4	0	0	0	0	multi-exon	FALSE	canonical	3	9528	junction_3	3218.76687913589	106892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCATGTTTTTGTTCTTTTT	100847309	True	NA	27	True	AATAAA	-15	NA	101002292	101006419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101006349
transcript_82493.known	chr2	+	717	4	FSM	ENSG00000071082.11	ENST00000441435.1	717	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	7691.06498910695	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCAAGGTACACCATGAATT	101002253	True	NA	5	True	AATAAA	-28	NA	101002738	101024032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002809_101004157_101004284_101005958_101006072_101023624
transcript_82494.known	chr2	+	357	3	FSM	ENSG00000071082.11	ENST00000456292.5	357	3	0	0	0	0	multi-exon	FALSE	canonical	3	15853	junction_1	457	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTAAGTTCTCCATCCCATAA	101002622	False	NA	-30	True	NA	NA	NA	101002690	101006071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101002809_101004157_101004284_101005958
transcript_82495.known	chr2	+	2478	2	FSM	ENSG00000272902.2	ENST00000610202.2	2478	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGGTGATGTTTCTTTTCT	101151571	True	NA	NA	False	ATTAAA	-14	NA	101151659	101155412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101152760_101154034
transcript_82496.known	chr2	+	2515	7	FSM	ENSG00000158435.8	ENST00000289382.8	2515	7	0	0	0	0	multi-exon	FALSE	canonical	3	590	junction_1	49.5131856736724	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATGTATTTTTTACTTT	101244740	True	NA	31	True	ATTAAA	-21	NA	101252885	101270316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_101253479_101257790_101257956_101262538_101262692_101264844_101265048_101266676_101266880_101269039_101269137_101269215
transcript_82497.known	chr2	-	2953	7	FSM	ENSG00000163162.9	ENST00000295317.4	2953	7	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	24.8243831746128	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCGTAGTGGCGGGCGCCTGT	-101305664	True	NA	NA	False	AATACA	-14	NA	101308701	101275600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_101277282_101281858_101282058_101286080_101286178_101288972_101289056_101294013_101294083_101294930_101295182_101308128
transcript_82498.known	chr2	-	621	2	FSM	ENSG00000163162.9	ENST00000485752.1	621	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAATATTGTGATTTTGA	-101272921	False	NA	-24	True	AATAAA	-22	NA	101272936	101271218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_101271745_101272841
transcript_82505.known	chr2	-	5293	6	FSM	ENSG00000135953.11	ENST00000258436.10	5293	6	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	14.2211110677049	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGGAACTGTCATTTATTC	-102735401	True	NA	-5	True	AATAAA	-16	NA	102736888	102714629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_102719208_102723699_102723910_102726844_102726975_102731024_102731069_102732321_102732410_102736645
transcript_82506.known	chr2	-	347	2	FSM	ENSG00000135953.11	ENST00000496253.1	347	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTCATTTTTT	NA	False	NA	1	True	ATTAAA	-16	NA	102718334	102715839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_102716042_102718189
transcript_82512.nnic	chr2	+	720	6	NNC	ENSG00000170417.16	novel	3198	6	NA	NA	-1	-32981	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	12.7843654515975	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGACAAGTAAGTACAATTCA	102736488	True	NA	NA	False	TATAAA	-13	NA	102736903	102986917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102965653_102965734_102986724
transcript_82513.known	chr2	+	3198	6	FSM	ENSG00000170417.16	ENST00000409173.5	3198	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	7.73045923603508	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATCTCTCCATATTGTATT	102736495	True	NA	NA	False	AATAAA	-40	NA	102736910	102817420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102758388_102758474_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_82516.known	chr2	+	3112	5	FSM	ENSG00000170417.16	ENST00000409528.5	3112	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	7.64852927038918	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATCATCTCTCCATATTG	102736492	True	NA	NA	False	AATAAA	-36	NA	102736907	102817416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102814747
transcript_82521.nic	chr2	+	874	5	NIC	ENSG00000170417.16	novel	1025	5	NA	NA	-1	-55	combination_of_known_junctions	TRUE	canonical	2	3	junction_4	10.6858551365813	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATTTGTTTTTCCAAAAAT	102736488	True	NA	NA	False	ATTAAA	-18	NA	102736903	102843838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102843411
transcript_82522.nnic	chr2	+	1557	5	NNC	ENSG00000170417.16	novel	1025	5	NA	NA	-1	17082	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_4	11.056672193748	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAACACAATCAAATTAAA	102736488	True	NA	NA	False	TTTAAA	-39	NA	102736903	102860975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102859865
transcript_82523.known	chr2	+	1025	5	FSM	ENSG00000170417.16	ENST00000639249.1	1025	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	10.6858551365813	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTGATGGTTTTTCTTT	102736489	True	NA	NA	False	AATAAA	-23	NA	102736904	102933463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102797862_102798001_102932884
transcript_82525.known	chr2	+	670	4	FSM	ENSG00000170417.16	ENST00000469971.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	12.5521135891752	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGGAAGTTCTGGCCAG	102736516	True	NA	NA	False	NA	NA	NA	102736931	102775518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102775129
transcript_82528.known	chr2	+	624	4	FSM	ENSG00000170417.16	ENST00000488134.5	624	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	13.490737563232	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAATTTTCTTCAGTAAGAAG	102736530	True	NA	NA	False	NA	NA	NA	102736945	102815104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_102737014_102762586_102762687_102764328_102764428_102814747
transcript_82529.nnic	chr2	+	886	4	NIC	ENSG00000170417.16	novel	1025	5	NA	NA	-1	-2	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	13.490737563232	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATATTTTGATGGTTTTTCT	102736488	True	NA	NA	False	AATAAA	-21	NA	102736903	102933461	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_102737014_102762586_102762687_102764328_102764428_102932884
transcript_82532.known	chr2	+	1472	2	FSM	ENSG00000228528.2	ENST00000666357.1	1472	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAAATGCTGTCTGCCATGA	NA	False	NA	-45	True	NA	NA	NA	104703238	104705753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_104703808_104704850
transcript_82533.known	chr2	-	642	3	FSM	ENSG00000224509.3	ENST00000456519.2	642	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTGTACGCATATGCT	-105038456	True	NA	NA	False	AATAAA	-14	NA	105038496	104936240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_104936766_104945003_104945078_105038453
transcript_82541.known	chr2	-	565	4	FSM	ENSG00000231851.6	ENST00000449177.1	565	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATGCCACTGTTATACT	-105102903	True	NA	NA	False	CATAAA	-10	NA	105102944	105097059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105097399_105098198_105098263_105099247_105099301_105102835
transcript_82546.known	chr2	+	1414	11	FSM	ENSG00000135972.9	ENST00000258455.8	1414	11	0	0	0	0	multi-exon	FALSE	canonical	3	730	junction_8	92.7064722659643	13414	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGCCGCTTTATTTTTTT	105032446	True	NA	20	True	AATAAA	-26	NA	105038068	105099960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105038228_105049170_105049351_105071312_105071376_105071458_105071490_105079982_105080063_105088983_105089070_105089919_105089996_105092400_105092570_105093529_105093639_105097154_105097325_105099669
transcript_82547.known	chr2	+	415	3	FSM	ENSG00000226508.1	ENST00000438148.1	415	3	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_2	13.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTATGTTCTAGTCTAATA	105144111	False	NA	NA	False	NA	NA	NA	105144141	105145424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105144176_105144488_105144696_105145250
transcript_82558.nnic	chr2	-	1268	2	Genic_Genomic	ENSG00000272994.1	novel	3449	1	NA	NA	-32	-7	multi-exon	FALSE	canonical	2	5	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTTGATTCTTGTTGATA	-105336913	True	NA	-6	True	AATATA	-15	NA	105337507	105334033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_105335069_105337274
transcript_82559.known	chr2	-	3449	1	FSM	ENSG00000272994.1	ENST00000610036.1	3449	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	25	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTCTTGTTGATAATGTAAT	-105336881	True	NA	1	True	AATATA	-22	NA	105337475	105334026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105334000_105337500
transcript_82563.nnic	chr2	+	972	6	NNC	ENSG00000135974.10	novel	854	5	NA	NA	-2	362	at_least_one_novel_splicesite	FALSE	canonical	1	14	junction_5	122.189361239021	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	105333704	True	NA	NA	False	AATAAA	-16	NA	105337529	105349573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314_105345390_105349250
transcript_82571.known	chr2	+	854	5	FSM	ENSG00000135974.10	ENST00000410049.1	854	5	0	0	0	0	multi-exon	FALSE	canonical	1	36	junction_3	103.454096100638	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAATGGCTTAGTATAT	105333706	True	NA	75	True	TTTAAA	-43	NA	105337531	105345596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105342975_105343100_105343224_105345314
transcript_82572.nnic	chr2	+	763	5	NNC	ENSG00000135974.10	novel	854	5	NA	NA	-2	-73	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	118.914885527423	51	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTTCTTCCCTCCCTCCCTT	105333704	True	NA	2	True	AATAAA	-17	NA	105337529	105345523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_105337687_105339582_105339750_105342847_105342975_105343120_105343224_105345314
transcript_82576.nnic	chr2	+	1098	5	NNC	ENSG00000135974.10	novel	4587	4	NA	NA	-2	362	intron_retention	FALSE	canonical	3	14	junction_4	112.898184219234	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTGTGTATTTGTTGAG	105333704	True	NA	NA	False	AATAAA	-16	NA	105337529	105349573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314_105345390_105349250
transcript_8258.nnic	chr1	+	484	2	Antisense	novelGene_ENSG00000215871.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTTCCTGAGTTTGGTGG	NA	False	NA	NA	False	AATAAA	-20	NA	100325662	100337317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_100325854_100337024
transcript_82582.known	chr2	+	4587	4	FSM	ENSG00000135974.10	ENST00000258457.7	4587	4	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_2	16.3571255285137	473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGGTAACTTTCTACTTT	105333714	True	NA	NA	False	ATTAAA	-15	NA	105337539	105349211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105337687_105339582_105339750_105342847_105343224_105345314
transcript_82588.known	chr2	-	1478	7	FSM	ENSG00000115641.19	ENST00000322142.13	1478	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	52.9614639777515	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGAGTGTGAAATCATGATT	-105396107	True	NA	-1	True	AATAAA	-31	NA	105399061	105360811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398969
transcript_82589.known	chr2	-	1531	6	FSM	ENSG00000115641.19	ENST00000393353.7	1531	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	33.1264244976726	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-105396097	True	NA	-15	True	AATAAA	-17	NA	105399051	105360825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398841
transcript_82590.known	chr2	-	1367	6	FSM	ENSG00000115641.19	ENST00000408995.5	1367	6	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_5	33.5141761050455	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATGTGACTTGCAATAAAG	-105396096	True	NA	-50	True	NA	NA	NA	105399050	105360860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105398969
transcript_82591.known	chr2	-	4881	6	FSM	ENSG00000115641.19	ENST00000409177.6	4881	6	0	0	0	0	multi-exon	TRUE	canonical	2	2	junction_5	53.1337933898945	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAGTTGACACAGTTCC	NA	False	NA	NA	False	NA	NA	NA	105399667	105357711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105399221
transcript_82600.known	chr2	-	1582	7	FSM	ENSG00000115641.19	ENST00000530340.6	1582	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_6	48.5855488345615	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTTGCCAGGCACAGAGT	-105396097	True	NA	-15	True	AATAAA	-17	NA	105399051	105360825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_105361435_105363284_105363472_105367569_105367740_105373558_105373734_105386360_105386541_105396646_105396698_105398841
transcript_82601.known	chr2	+	1795	4	FSM	ENSG00000071051.14	ENST00000451463.6	1795	4	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_3	184.102024854578	153	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTGTATTTATCTTT	105745031	False	NA	17	True	AATAAA	-20	NA	105745062	105894274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_105745139_105816429_105816614_105855047_105855290_105892981
transcript_82603.known	chr2	+	753	4	FSM	ENSG00000119147.10	ENST00000238044.8	753	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	1.69967317119759	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTAGAATTCATTTGGGT	106065589	True	NA	NA	False	AATAAA	-21	NA	106065687	106078155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_106065844_106071843_106071892_106073885_106074044_106077764
transcript_82608.known	chr2	-	1839	15	FSM	ENSG00000115652.15	ENST00000409501.7	1839	15	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_13	33.8846332036653	256	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTTCCAAGGTCTACTT	-106187862	True	NA	NA	False	GATAAA	-42	NA	106194299	106093507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_82614.nnic	chr2	-	1945	14	NIC	ENSG00000115652.15	novel	1839	15	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	3	36	junction_1	91.7379210242207	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATGGACTTCCAGTT	-106187878	True	NA	-22	True	AATAAA	-14	NA	106194315	106093313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_106094158_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_82618.nnic	chr2	-	1887	13	NIC	ENSG00000115652.15	novel	1839	15	NA	NA	-14	-3	combination_of_known_splicesites	FALSE	canonical	2	5	junction_1	103.483862134259	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGTCATGGACTTCCAGTT	-106187878	True	NA	-22	True	AATAAA	-14	NA	106194315	106093313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_106094158_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106145189_106145371_106158057_106158119_106163666_106163711_106164735_106164785_106166055_106166084_106194147
transcript_82621.nnic	chr2	-	1753	10	NNC	ENSG00000115652.15	novel	2053	15	NA	NA	7402	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_9	115.48202788933	293	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCATGGACTTCCAGTTTTA	-106131336	True	NA	-19	True	AATAAA	-17	NA	106131384	106093310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_106094158_106096717_106096822_106098715_106098774_106101057_106101119_106104793_106104838_106112645_106112766_106122969_106123092_106125619_106125680_106129673_106129779_106131152
transcript_82633.known	chr2	+	2828	9	FSM	ENSG00000198203.10	ENST00000326853.9	2828	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.47953509134722	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	108288638	108309915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108298566_108298662_108300899_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_82634.known	chr2	+	1359	8	FSM	ENSG00000198203.10	ENST00000437390.6	1359	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	6.04405594323034	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTGAGTACAAAAGGAT	NA	False	NA	4	True	AATAAA	-15	NA	108288914	108308713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300795_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_82635.known	chr2	+	2539	8	FSM	ENSG00000198203.10	ENST00000251481.11	2539	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	5.42481072744215	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCATTGTAAAATTTTTGT	NA	False	NA	NA	False	AATAAA	-22	NA	108288894	108309915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108300837_108300936_108304573_108304701_108305171_108305267_108305414_108305596_108308351
transcript_82637.known	chr2	+	1206	7	FSM	ENSG00000198203.10	ENST00000409880.5	1206	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	6.15765106730372	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTTGAGTACAAAAGGAT	NA	False	NA	4	True	AATAAA	-15	NA	108288914	108308713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108289071_108293646_108293819_108294228_108294355_108304586_108304701_108305171_108305267_108305414_108305596_108308351
transcript_82639.known	chr2	+	1045	5	FSM	ENSG00000198075.10	ENST00000409309.3	1045	5	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	3	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTCAATAAATCACTAGGTA	108378039	False	NA	NA	False	NA	NA	NA	108378184	108387640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108378507_108381761_108381888_108383415_108383511_108386191_108386373_108387319
transcript_82641.known	chr2	+	786	6	FSM	ENSG00000135968.22	ENST00000409821.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	61.4309368315346	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAGCTATACACCAAGAAGAG	108446106	True	NA	NA	False	NA	NA	NA	108449230	108470062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108449290_108449632_108449690_108451027_108451113_108452398_108452467_108468979_108469085_108469650
transcript_82644.nic	chr2	+	375	5	FSM	ENSG00000135968.22	ENST00000467566.2	764	5	-23	412	5	-403	multi-exon	FALSE	canonical	3	149	junction_1	14.0089257261219	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAAATATAAAAATGAAGC	108446065	True	NA	NA	False	AAAAAG	-35	NA	108449189	108469053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108449281_108449632_108449690_108451027_108451113_108452398_108452467_108468979
transcript_82661.known	chr2	-	558	3	FSM	ENSG00000214184.3	ENST00000322353.3	558	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTATTAAAATTTCTCA	-108533999	True	NA	NA	False	AATAAA	-9	NA	108534196	108507514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_108507622_108511929_108512013_108533828
transcript_82663.known	chr2	+	4461	10	FSM	ENSG00000169756.16	ENST00000544547.5	4461	10	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_7	16.1665712101038	296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AACAATAACCTGTTGTATAT	108534323	False	NA	17	True	AATAAA	-15	NA	108534354	108687238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108534595_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_82668.known	chr2	+	1627	10	FSM	ENSG00000169756.16	ENST00000409441.5	1627	10	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	27.2967234500977	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAACAAATCTTATACAA	108621056	True	NA	NA	False	AAGAAA	-29	NA	108621265	108684448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108621462_108659604_108659765_108670780_108670848_108672324_108672446_108672879_108673030_108675877_108676029_108676605_108676699_108677978_108678028_108680694_108680771_108683884
transcript_82673.known	chr2	+	11708	29	FSM	ENSG00000153201.16	ENST00000283195.11	11708	29	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_6	114.17938692233	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATCTTAAGTGGTACTTTAT	108708029	True	NA	31	True	AATAAA	-15	NA	108719481	108785809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735763_108736103_108736250_108740488_108740682_108746710_108746799_108748919_108749130_108751263_108751446_108751527_108751704_108751870_108751995_108752997_108753160_108753425_108753564_108753824_108753972_108754904_108755085_108755175_108755260_108758412_108758549_108762100_108762196_108763236_108768389_108771700_108771872_108772488_108772582_108772867_108773047_108775731_108775937_108777129_108777232_108781268_108781430_108782127_108782402_108782527_108782863_108783595
transcript_82674.nnic	chr2	+	1004	6	NNC	ENSG00000153201.16	novel	11708	29	NA	NA	-14	-1704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	63.477240015615	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGGTGTACTTGTGTTT	108708015	True	NA	11	True	AATAAA	-19	NA	108719467	108784105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_108719679_108729131_108729200_108730773_108730886_108731321_108731475_108735531_108735741_108783854
transcript_82679.known	chr2	+	2375	15	FSM	ENSG00000163006.12	ENST00000295124.9	2375	15	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_13	21.3388598283861	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781510	True	NA	NA	False	AATAAA	-20	NA	108786770	108876578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108873450_108873590_108876087
transcript_8268.known	chr1	-	2835	5	FSM	ENSG00000162694.14	ENST00000370113.7	2835	5	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_4	99.9874992186523	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCTGTGTTAACTAAG	-100891765	True	NA	-23	True	AATAAA	-19	NA	100894812	100872386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888865_100894632
transcript_82684.known	chr2	+	2250	14	FSM	ENSG00000163006.12	ENST00000412964.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	34.0013922443804	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781496	True	NA	NA	False	AATAAA	-20	NA	108786756	108876578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108839184_108839302_108846737_108846931_108856793_108856971_108876087
transcript_82697.nnic	chr2	+	2148	13	NIC	ENSG00000163006.12	novel	2250	14	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	2	21	junction_10	50.7840608196443	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACAGGGTTAAATAATACTG	108781479	True	NA	NA	False	AATAAA	-18	NA	108786739	108876576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108846737_108846931_108856793_108856971_108876087
transcript_82706.nnic	chr2	+	1919	12	NIC	ENSG00000163006.12	novel	2375	15	NA	NA	-17	0	combination_of_known_splicesites	FALSE	canonical	1	4	junction_10	48.6733079735794	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGGGTTAAATAATACTGTC	108781479	True	NA	NA	False	AATAAA	-20	NA	108786739	108876578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_108786916_108788031_108788090_108788851_108788967_108791674_108791803_108794539_108794722_108798427_108798587_108804888_108805009_108812630_108812709_108812819_108812928_108815940_108816106_108873450_108873590_108876087
transcript_8271.known	chr1	-	3146	4	FSM	ENSG00000162694.14	ENST00000535414.5	3146	4	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	133.947751007622	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGCAGACTCATGTTTTT	-100894914	False	NA	-8	True	AATAAA	-34	NA	100895179	100872371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100874431_100877475_100877904_100888752_100888865_100894632
transcript_82725.known	chr2	-	2719	10	FSM	ENSG00000186522.15	ENST00000397714.6	2719	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	150.999632081965	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109611593	True	NA	-55	True	AATAAA	-40	NA	109613927	109542985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109613797
transcript_82733.nnic	chr2	-	2243	7	NIC	ENSG00000186522.15	novel	2719	10	NA	NA	14	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	168.15014785073	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAATGTGTTTAATTTTCCT	-109613915	False	NA	-55	True	AATAAA	-40	NA	109613952	109542985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109613797
transcript_82735.known	chr2	-	3014	11	FSM	ENSG00000186522.15	ENST00000397712.7	3014	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	116.523345300416	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATCTGTATACTTTAAAT	-109613929	False	2049	-10	True	AATAAA	-17	NA	109613966	109542798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109544325_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_82736.known	chr2	-	3091	12	FSM	ENSG00000186522.15	ENST00000356688.8	3091	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.670934951819	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTTTAATTTTCCTTTCT	-109614106	False	NA	-51	True	AATAAA	-44	NA	109614143	109542981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_109544325_109545459_109545543_109546049_109546238_109553086_109553220_109564365_109564535_109565762_109565860_109567814_109567977_109574580_109574768_109585125_109585322_109585720_109585839_109593050_109593120_109613797
transcript_82739.known	chr2	-	2522	20	FSM	ENSG00000144061.14	ENST00000445609.7	2522	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	26.6495674633451	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGGAAGTTAAAGTGATCCA	-110204986	False	8723	NA	False	AATAAA	-20	NA	110205013	110123347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110124064_110125636_110125682_110129185_110129260_110131678_110131792_110143541_110143642_110144492_110144570_110146752_110146836_110147915_110148027_110150181_110150257_110160126_110160256_110161602_110161698_110163047_110163136_110164687_110164731_110165051_110165156_110168451_110168554_110169805_110169999_110178422_110178548_110179623_110179685_110201420_110201495_110204899
transcript_82741.known	chr2	-	742	4	FSM	ENSG00000144061.14	ENST00000418527.1	742	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	14.7044966667418	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGAGTGTGGTGACTCAT	-110204972	False	8723	3	True	CATAAA	-25	NA	110204999	110178040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110178548_110179623_110179685_110201420_110201495_110204899
transcript_82743.nic	chr2	-	467	4	NIC	ENSG00000144061.14	novel	486	5	NA	NA	-7	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	30.2140511829991	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTATAATTTTATTTTTT	-110205022	False	NA	NA	False	AATAAA	-18	NA	110205049	110178753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_110178936_110179623_110179685_110201420_110201495_110204899
transcript_82746.known	chr2	-	427	2	FSM	ENSG00000175701.11	ENST00000611969.5	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	588	junction_1	0	5730	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGACCCTTTTATTTTTTC	-110203824	True	NA	-22	True	AATAAA	-14	NA	110212547	110211528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110211623_110212214
transcript_82748.known	chr2	-	3762	25	FSM	ENSG00000169679.15	ENST00000302759.11	3762	25	0	0	0	0	multi-exon	FALSE	canonical	1	372	junction_3	157.143727337959	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTACCTGTTCTTCATTGC	-110664562	True	NA	-34	True	AATAAA	-17	NA	110678063	110637527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_82753.known	chr2	-	3532	24	FSM	ENSG00000169679.15	ENST00000535254.6	3532	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	240.524694250764	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAACACTGACCTGTTTAA	-110664562	True	NA	NA	False	NA	NA	NA	110678063	110637697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110638160_110639741_110639849_110641033_110641206_110641306_110641465_110641641_110641804_110642118_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110677969
transcript_82759.nic	chr2	-	936	9	ISM	ENSG00000169679.15	ENST00000465029.5	1999	10	-36	5520	-36	-426	5prime_fragment	FALSE	canonical	3	897	junction_1	83.5268482285786	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAGAAGCAAATGCTTTT	-110664598	True	NA	NA	False	AGTAAA	-24	NA	110678099	110666387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_82762.nic	chr2	-	957	5	ISM	ENSG00000169679.15	ENST00000465029.5	1999	10	-36	9270	-36	387	5prime_fragment	FALSE	canonical	3	943	junction_4	86.5978492804527	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAACCCATCCAA	-110664598	True	NA	NA	False	NA	NA	NA	110678099	110670137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_82764.known	chr2	-	2501	20	FSM	ENSG00000169679.15	ENST00000466333.5	2501	20	0	0	0	0	multi-exon	FALSE	canonical	3	733	junction_7	86.2317948188088	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACCTGAGTTGTCTTTTGT	-110664527	True	NA	NA	False	AATAAA	-24	NA	110678028	110642113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_110642235_110649233_110649378_110650545_110650785_110653435_110653524_110655738_110655917_110657035_110657118_110657545_110657646_110658409_110658521_110658613_110658743_110659977_110660037_110661581_110661842_110666262_110666415_110667520_110667706_110667796_110667850_110669452_110669554_110670524_110670569_110672660_110672858_110674085_110674225_110674305_110674366_110677969
transcript_82782.nnic	chr2	+	1663	12	NNC	ENSG00000153093.20	novel	2699	18	NA	NA	9	40583	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_11	31.4385140439121	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGCCATCTCATTGACTT	110730516	True	NA	NA	False	AATAAA	-16	NA	110732581	110928600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110908788_110908906_110928057
transcript_82788.nnic	chr2	+	2036	9	NNC	ENSG00000153093.20	novel	2188	11	NA	NA	-5	6854	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_8	33.4243548928023	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAAGAAAAAAACTTAAA	110730502	True	NA	NA	False	AATAAA	-8	NA	110732567	110803035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110801848
transcript_8279.known	chr1	+	429	1	FSM	ENSG00000273204.1	ENST00000609247.1	429	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACGTTTAACAGCCTTTAT	100894711	True	NA	5	True	ATTAAA	-17	NA	100894927	100895356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100894900_100895400
transcript_82792.nic	chr2	+	2219	8	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-111	84968	-16	6868	5prime_fragment	TRUE	canonical	3	80	junction_6	11.4731274315779	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTAAAATGGACCAAATTCT	110730457	True	NA	NA	False	AATAAA	-22	NA	110732522	110803049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651
transcript_82795.nic	chr2	+	760	3	ISM	ENSG00000153093.20	ENST00000340561.8	2188	11	-61	102825	0	-8508	5prime_fragment	FALSE	canonical	3	111	junction_1	3.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAATAATGCTCACAGA	110730507	True	NA	NA	False	AATAAA	-15	NA	110732572	110785192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_110732775_110768367_110768465_110784731
transcript_82798.known	chr2	+	2188	11	FSM	ENSG00000153093.20	ENST00000340561.8	2188	11	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_10	28.8138855415232	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTCTCTGCTGATAAAT	110730568	True	NA	NA	False	AATAAA	-26	NA	110732633	110888017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_110732775_110768367_110768465_110784731_110784816_110793649_110793737_110794075_110794175_110798609_110798725_110799013_110799101_110801651_110801725_110805262_110805396_110841370_110841406_110886780
transcript_8280.known	chr1	-	2825	5	FSM	ENSG00000162694.14	ENST00000370114.8	2825	5	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_4	42.5404219537136	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGTGTTCTGTGTTAAC	-100891795	True	NA	-27	True	AATAAA	-15	NA	100894842	100872390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100874431_100876793_100876865_100877475_100877904_100888752_100888829_100894632
transcript_82800.known	chr2	-	777	4	FSM	ENSG00000172965.17	ENST00000419736.5	777	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTGTTTGCTTATTAGCT	-111494898	True	NA	-1	True	ATTAAA	-20	NA	111495051	111429311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111477335_111477482_111479906_111480062_111494884
transcript_82801.known	chr2	-	2065	3	FSM	ENSG00000172965.17	ENST00000673964.1	2065	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATTGAAAGCAAGGACTCC	-111494914	True	NA	NA	False	NA	NA	NA	111495067	111320094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111321800_111344060_111344238_111494884
transcript_82803.known	chr2	-	552	3	FSM	ENSG00000172965.17	ENST00000308604.5	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	-111494835	False	NA	-8	True	ATTAAA	-13	NA	111494988	111429318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111477335_111477482_111494884
transcript_82805.known	chr2	-	514	2	FSM	ENSG00000172965.17	ENST00000409569.2	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	0	486	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGCTTATTAGCTATC	-111494933	True	NA	2	True	ATTAAA	-23	NA	111495086	111429308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111494884
transcript_82806.known	chr2	-	419	2	FSM	ENSG00000172965.17	ENST00000674026.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAACAGAATTGTTTGCTT	NA	False	NA	-8	True	ATTAAA	-13	NA	111462731	111429318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111429621_111462614
transcript_82807.known	chr2	+	720	4	FSM	ENSG00000153094.24	ENST00000337565.9	720	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	6.18241233033047	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTTCTCTGTTTCTTTCTA	111120609	True	NA	10	True	AATAAA	-17	NA	111120913	111128844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_111121189_111123732_111123870_111124049_111124140_111128626
transcript_82808.known	chr2	-	1809	5	FSM	ENSG00000153107.13	ENST00000489177.1	1809	5	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_2	47.91137651957	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAACATTCTGTAATGTTT	NA	False	NA	NA	False	ACTAAA	-9	NA	111884690	111872799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_82810.known	chr2	-	580	2	FSM	ENSG00000153107.13	ENST00000467878.1	580	2	0	0	0	0	multi-exon	FALSE	canonical	3	462	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGTAGAGTTAAGGTG	-111876522	True	NA	NA	False	NA	NA	NA	111884181	111880509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111880850_111883941
transcript_82811.known	chr2	-	7762	48	FSM	ENSG00000153107.13	ENST00000341068.8	7762	48	0	0	0	0	multi-exon	TRUE	canonical	3	322	junction_42	77.2565936246739	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGTTGTTTGCACACATAT	-111876534	True	NA	-3	True	AATAAA	-18	NA	111884193	111767639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_111769407_111772340_111772476_111776858_111777058_111778674_111778771_111780298_111780386_111782368_111782508_111783896_111783965_111784322_111784401_111785359_111785478_111788233_111788321_111792361_111792556_111794077_111794132_111794232_111794324_111794817_111794895_111800796_111800872_111802427_111802507_111803447_111803531_111803704_111803840_111805801_111805894_111808946_111809182_111815369_111815642_111818839_111818959_111821238_111821454_111822421_111822601_111824965_111825037_111825130_111825168_111825776_111825856_111831285_111831435_111833219_111833312_111834603_111834873_111838437_111838513_111843411_111843600_111847137_111847199_111847724_111847866_111850775_111850911_111856613_111856680_111856795_111856887_111858305_111858402_111862388_111862599_111863674_111863896_111864805_111864952_111868022_111868097_111872629_111872713_111873307_111873409_111873612_111873665_111878809_111878972_111880612_111880850_111883941
transcript_82817.known	chr2	+	5162	19	FSM	ENSG00000153214.11	ENST00000283206.9	5162	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	14.7490321925638	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATTGATTCTTGATAGTAT	112054715	True	NA	13	True	AATAAA	-18	NA	112055268	112119314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112055757_112059976_112060038_112064161_112064254_112066935_112067068_112074911_112074963_112077191_112077283_112081056_112081119_112081334_112081519_112086004_112086105_112089624_112089719_112091711_112091784_112097043_112097153_112097232_112097292_112098594_112098699_112100621_112100696_112106001_112106076_112107787_112107841_112112898_112112930_112116083
transcript_82819.known	chr2	+	1479	4	FSM	ENSG00000144152.13	ENST00000272559.4	1479	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.16024689946929	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATTGCTCCTTCCTGCCC	NA	False	NA	-12	True	AATAAA	-2	NA	112181882	112188199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112182019_112182790_112182929_112185200_112185340_112187133
transcript_8282.known	chr1	+	7898	12	FSM	ENSG00000162695.12	ENST00000370112.8	7898	12	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_11	13.8157892665548	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACCTGAATTGTGTCTTA	100893151	True	NA	8	True	AATAAA	-18	NA	100896075	100981753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809_100974903_100975218
transcript_82825.known	chr2	-	1601	9	NNC	ENSG00000144161.14	novel	5892	9	NA	NA	-27	40	at_least_one_novel_splicesite	FALSE	non_canonical	3	59	junction_3	13.3510299228187	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTAGAGTTCGTAACTT	-112253820	True	NA	0	True	AATAAA	-32	NA	112255087	112215864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_112216469_112230902_112230951_112231837_112231946_112233257_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_82836.nic	chr2	-	806	6	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-78	21797	16	0	5prime_fragment	FALSE	canonical	3	79	junction_4	8.70402205879558	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTGTAAGTTTTAT	-112253853	True	NA	17	True	AAGAAA	-2	NA	112255120	112233325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_82837.nic	chr2	-	509	3	ISM	ENSG00000144161.14	ENST00000409573.7	5892	9	-78	26786	16	-1729	5prime_fragment	FALSE	canonical	3	79	junction_1	3.5	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAAGAGTCAAACTATTTTA	-112253853	True	NA	NA	False	AGTAAA	-15	NA	112255120	112238314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_112238529_112250190_112250273_112254907
transcript_82839.known	chr2	-	319	2	FSM	ENSG00000144161.14	ENST00000495264.1	319	2	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGATGGAAATGGATATGAG	-112253793	True	NA	NA	False	AAAAAG	-7	NA	112255060	112250106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112250273_112254907
transcript_8284.known	chr1	+	8204	11	FSM	ENSG00000162695.12	ENST00000357650.9	8204	11	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_4	9.92975326984513	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAATTGTGTCTTATCAG	100893165	True	NA	12	True	AATAAA	-22	NA	100896089	100981757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_100896343_100896569_100896672_100906851_100906966_100911062_100911151_100912111_100912239_100913662_100913807_100918076_100918128_100921705_100921842_100961827_100961919_100965768_100965919_100974809
transcript_82841.known	chr2	-	5892	9	FSM	ENSG00000144161.14	ENST00000409573.7	5892	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.5991448356198	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTTTGTTATGGAGTTT	-112253775	True	NA	NA	False	AATAAA	-15	NA	112255042	112211528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112216469_112230902_112230951_112231837_112231948_112233259_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112254907
transcript_82842.known	chr2	-	847	7	FSM	ENSG00000144161.14	ENST00000474234.5	847	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	41.3417330174835	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGAAATGTGTAAGTTTTAT	-112253756	True	NA	17	True	AAGAAA	-2	NA	112255023	112233325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112233372_112234119_112234237_112236561_112236696_112238314_112238529_112250190_112250273_112253969_112254100_112254899
transcript_82844.known	chr2	+	963	4	FSM	ENSG00000188177.14	ENST00000476511.1	963	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.82842712474619	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATATATCCTCTATTAG	NA	False	NA	NA	False	AATAAA	-19	NA	112299855	112312192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112300030_112303228_112303352_112309884_112310162_112311803
transcript_82845.known	chr2	-	7299	23	FSM	ENSG00000169629.12	ENST00000302558.8	7299	23	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	44.9066985008688	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCACTGTCTCTTTGGGGTT	-112433443	False	NA	NA	False	ATTAAA	-34	NA	112433645	112368368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112370213_112378052_112378255_112380823_112380964_112388023_112390248_112390974_112391070_112394617_112394754_112397921_112398006_112398098_112398279_112399222_112399370_112399631_112399770_112400035_112400195_112401116_112401241_112401407_112401584_112401666_112401849_112403965_112404176_112406296_112406385_112412430_112412627_112417192_112417339_112417683_112417915_112421959_112422113_112422547_112422660_112424239_112424308_112433381
transcript_82847.known	chr2	+	7527	15	FSM	ENSG00000125630.16	ENST00000263331.10	7527	15	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_5	35.9560389182941	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTGCAAATATTTTCT	112533531	True	NA	23	True	TATAAA	-16	NA	112542464	112579818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292_112559575_112564365_112564500_112567966_112568138_112568745_112568903_112572561_112572759_112573561_112573816_112574846
transcript_82851.nic	chr2	+	2237	9	ISM	ENSG00000125630.16	ENST00000263331.10	7527	15	-558	20207	-8	216	5prime_fragment	FALSE	canonical	3	286	junction_5	36.8152057579474	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGGTTTTTTTGTGTTCT	112541830	True	NA	NA	False	GATAAA	-16	NA	112541906	112559611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_112542672_112547011_112547180_112547420_112547568_112549266_112549400_112550865_112551003_112551774_112551999_112552644_112552817_112557909_112558082_112559292
transcript_82854.known	chr2	+	691	4	FSM	ENSG00000125611.16	ENST00000324913.10	523	4	-168	0	-28	0	multi-exon	FALSE	canonical	3	508	junction_1	52.8036194045657	3927	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584427	False	NA	29	True	AATAAA	-21	NA	112584440	112589040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112584650_112585973_112586115_112586199_112586366_112588865
transcript_82860.known	chr2	+	529	4	FSM	ENSG00000125611.16	ENST00000469030.1	529	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	292.271943383023	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112584854	False	NA	29	True	AATAAA	-21	NA	112584871	112589040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112584919_112585973_112586115_112586199_112586366_112588865
transcript_82865.known	chr2	+	748	3	FSM	ENSG00000125611.16	ENST00000454841.5	748	3	0	0	0	0	multi-exon	FALSE	canonical	3	508	junction_1	56.5	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGATTCCTGCCATCCGT	112581053	True	NA	29	True	AATAAA	-21	NA	112584468	112589040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112584650_112585973_112586366_112588865
transcript_82873.known	chr2	-	359	1	FSM	ENSG00000231747.1	ENST00000443291.1	359	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	304	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTCAACTATTTTAATAAATT	NA	False	NA	-45	True	NA	NA	NA	112622167	112621808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112621800_112622200
transcript_82876.known	chr2	-	1266	7	FSM	ENSG00000237753.2	ENST00000671122.1	1266	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	0.687184270936277	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGAAATAAAGTTGTT	-112645645	True	NA	NA	False	NA	NA	NA	112645720	112641859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098_112644246_112644897_112645324_112645429
transcript_82877.known	chr2	-	2022	5	FSM	ENSG00000237753.2	ENST00000457336.1	2022	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.433012701892219	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAACCGTGTCTTAGAGTTA	-112645615	True	NA	NA	False	AATAAA	-15	NA	112645690	112641831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112641983_112642082_112642190_112643178_112643294_112643958_112644016_112644098
transcript_82881.known	chr2	+	3297	11	FSM	ENSG00000144136.11	ENST00000272542.8	3297	11	0	0	0	0	multi-exon	TRUE	canonical	3	589	junction_2	102.238984736743	267	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTCTCATGGTTTTCTT	112633594	True	NA	20	True	AATAAA	-23	NA	112645938	112663825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_112646130_112646562_112647163_112647323_112647465_112647652_112647739_112652701_112652799_112657121_112657242_112658824_112659095_112659203_112659763_112660386_112660573_112661141_112661227_112662863
transcript_82886.known	chr2	-	4723	9	FSM	ENSG00000169607.13	ENST00000302450.11	4723	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	5.19464868879504	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCAAGAATTAGAGTTAACT	-112762936	True	NA	-3	True	AATAAA	-19	NA	112764609	112736348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_82890.nic	chr2	-	1572	5	ISM	ENSG00000169607.13	ENST00000302450.11	4723	9	-88	16047	-33	4379	5prime_fragment	FALSE	canonical	3	51	junction_2	2.54950975679639	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GTAATAAAGGAAATGAATAT	-112763024	True	NA	20	True	TATAAA	-34	NA	112764697	112752395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_112752475_112755976_112757215_112760712_112760765_112762502_112762570_112764561
transcript_82893.nnic	chr2	+	1118	2	Antisense	novelGene_ENSG00000169607.13_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAGACCACTCTGGATAC	NA	False	NA	NA	False	AATGAA	-44	NA	112764144	112771481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_112764579_112770797
transcript_82895.known	chr2	-	2455	10	FSM	ENSG00000169607.13	ENST00000435431.5	2455	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	16.8720676464584	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTTTATCTTATTTATTA	-112762944	True	NA	-2	True	ATTAAA	-17	NA	112764617	112737866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112739049_112740817_112741008_112742705_112742770_112746419_112746576_112752266_112752475_112755976_112756135_112756892_112757215_112760712_112760765_112762502_112762570_112764561
transcript_82896.known	chr2	-	557	4	FSM	ENSG00000169607.13	ENST00000481732.5	557	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	25.7725090401036	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGATCCTAAATTATATACCA	-112762945	True	NA	NA	False	NA	NA	NA	112764618	112756774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112757156_112760712_112760765_112762502_112762570_112764561
transcript_82897.known	chr2	-	2017	7	FSM	ENSG00000115008.6	ENST00000263339.4	2017	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.06718737290547	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTCTGACACATAGTTATT	-112784470	True	NA	NA	False	AATAAA	-14	NA	112784493	112773924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_112775268_112777986_112778112_112779495_112779667_112781603_112781827_112782715_112782765_112783723_112783779_112784442
transcript_82899.nnic	chr2	+	805	2	Intergenic	novelGene_26	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	26	junction_1	0	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTGGGTCAGATTTTTGG	112850022	True	NA	9	True	AATAAA	-18	NA	112850115	112863513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_112850323_112862915
transcript_82902.known	chr2	+	8258	6	FSM	ENSG00000189223.15	ENST00000661674.1	8258	6	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	9.38083151964686	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTTTTCAACTAAAACAAAA	113234953	True	NA	NA	False	NA	NA	NA	113235535	113272917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113235571_113238089_113238213_113255389_113255550_113259263_113259585_113263277_113263455_113265475
transcript_82909.known	chr2	+	2402	4	FSM	ENSG00000189223.15	ENST00000437551.6	2402	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	11.323525167642	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGGAGTTGCATAAGGCA	NA	False	NA	NA	False	AATAAA	-12	NA	113235514	113241410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113235571_113238089_113238213_113239088_113241102_113241200
transcript_82910.nnic	chr2	+	1263	3	NNC	ENSG00000189223.15	novel	2402	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	1.5	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGAGGCTTCCCTGTCCTT	NA	False	NA	2	True	AATAAA	-18	NA	113235513	113240825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_113235571_113238089_113238213_113239742
transcript_82911.nic	chr2	+	796	3	ISM	ENSG00000189223.15	ENST00000451179.6	7967	5	8	16912	-1	471	5prime_fragment	FALSE	canonical	2	9	junction_2	9	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAAAGTTCTCCAGTTCTC	NA	False	NA	NA	False	AGTAAA	-9	NA	113235513	113256005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_113235571_113238089_113238213_113255389
transcript_82912.known	chr2	+	461	2	FSM	ENSG00000189223.15	ENST00000553869.7	461	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTATATAGTCAAATCTTTT	113234969	True	NA	NA	False	AAAAAG	-12	NA	113235551	113238531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113235571_113238089
transcript_82913.nic	chr2	+	654	2	ISM	ENSG00000189223.15	ENST00000669027.1	7831	4	17	16909	0	474	5prime_fragment	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGTTCTCCAGTTCTCATT	113234953	True	NA	NA	False	AGTAAA	-12	NA	113235535	113256008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_113235571_113255389
transcript_82930.known	chr2	+	1411	16	NNC	ENSG00000136682.16	novel	1740	16	NA	NA	-3	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_6	580.667508610182	398	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTATATTTCAAGCATTTAT	NA	False	NA	NA	False	AATAAA	-16	NA	113437787	113495797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113455555_113455644_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_82932.known	chr2	+	1436	16	FSM	ENSG00000136682.16	ENST00000456188.5	1436	16	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	575.395454351952	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTTCAAGCATTTATTT	113431831	True	NA	NA	False	AATAAA	-18	NA	113437821	113495799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113457064_113457210_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_82948.known	chr2	+	1740	16	FSM	ENSG00000136682.16	ENST00000358604.7	1740	16	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_1	530.580462009926	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTAAGTGTCACCATTTTA	NA	False	NA	NA	False	ATTAAA	-13	NA	113437790	113496119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113439019_113439118_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_8295.known	chr1	-	948	7	FSM	ENSG00000117543.22	ENST00000466807.5	948	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_6	123.575438048541	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAATCCTCATAATTCCCAGG	-101021465	True	NA	NA	False	NA	NA	NA	101025771	100990314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025639
transcript_82956.known	chr2	+	1827	15	FSM	ENSG00000136682.16	ENST00000259199.9	1827	15	0	0	0	0	multi-exon	FALSE	canonical	3	619	junction_6	450.799674954159	5358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGAGTGTTTGTCAGGTTTC	NA	False	NA	NA	False	NA	NA	NA	113437690	113496204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113471032_113471090_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_8296.nic	chr1	-	1210	7	NIC	ENSG00000117543.22	novel	1768	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_6	121.388723620533	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-101021518	True	NA	-23	True	ATTAAA	-16	NA	101025824	100990062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101025682
transcript_82973.known	chr2	+	1665	14	FSM	ENSG00000136682.16	ENST00000416503.6	1665	14	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_9	540.988783530052	750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTTGATGTTGACGACCTG	NA	False	NA	NA	False	AATAAA	-19	NA	113437762	113496171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766_113443864_113444963_113445056_113453138_113453199_113454740_113454779_113460672_113460720_113462407_113462495_113465128_113465174_113482176_113482229_113493756_113493826_113493928_113493995_113495119_113495250_113495636
transcript_83.known	ERCC-00171	+	489	1	FSM	ERCC-00171A	DQ854994	489	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45890	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00171_+_0_500
transcript_83002.known	chr2	+	880	3	FSM	ENSG00000136682.16	ENST00000490323.5	880	3	0	0	0	0	multi-exon	FALSE	canonical	3	1476	junction_1	117	828	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGTATTCTAGTGAATTAAA	113431848	True	NA	NA	False	TATAAA	-26	NA	113437838	113444375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113438023_113441350_113441438_113443766
transcript_8301.known	chr1	+	1321	6	FSM	ENSG00000233184.8	ENST00000655226.1	1321	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.02988833592198	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCATGGCCGATGGCAGA	101025250	True	NA	-65	True	ATTAAA	-22	NA	101025889	101087193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101080388_101080614_101083460_101083575_101086851
transcript_83016.known	chr2	+	1684	10	FSM	ENSG00000146556.15	ENST00000453662.6	1684	10	0	0	0	0	multi-exon	TRUE	canonical	3	7	junction_6	91.0994572492675	205	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCAACAGTGTGCTTTTA	113588428	False	NA	NA	False	AATAAA	-12	NA	113588549	113599034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113588704_113595062_113595162_113595368_113595516_113595692_113595830_113596067_113596204_113596380_113596583_113596670_113596830_113597485_113597639_113598397_113598467_113598606
transcript_8302.known	chr1	+	1266	6	FSM	ENSG00000233184.8	ENST00000658370.1	1266	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	4.06939798987516	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTAACTGTTTTTCTTACA	101025267	True	NA	10	True	AATAAA	-23	NA	101025906	101087268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101080886_101080999_101083460_101083575_101086851
transcript_8305.known	chr1	+	1268	6	FSM	ENSG00000233184.8	ENST00000454721.7	1382	6	35	79	-2	-4	multi-exon	FALSE	canonical	1	1	junction_2	3.70944739819828	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCTGAGCATGGCCGATGG	101025245	True	NA	-69	True	ATTAAA	-18	NA	101025884	101087189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101072659_101072831_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_83051.nnic	chr2	-	761	4	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	-9947	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_3	8.64098759787715	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626010	True	NA	-3	True	ATTAAA	-27	NA	113627147	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622162_113625608_113625730_113626477_113626572_113627037
transcript_83056.nnic	chr2	-	592	4	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-85	-9954	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	20.3141986469235	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGAATCCATGTATTTGT	-113626038	True	NA	-10	True	ATTAAA	-20	NA	113627175	113621732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622017_113622112_113622162_113625608_113625730_113627037
transcript_83060.known	chr2	-	2078	3	FSM	ENSG00000240356.6	ENST00000416673.6	2078	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	26	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGACGGTTAACTTTAGGCAT	-113625903	False	NA	NA	False	CATAAA	-6	NA	113627040	113610501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113612248_113625608_113625730_113626829
transcript_83061.nnic	chr2	-	1168	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	216	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	3	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	-113626010	True	NA	NA	False	AAGAAA	-20	NA	113627147	113611467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_83062.known	chr2	-	738	3	FSM	ENSG00000240356.6	ENST00000391616.3	738	3	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	9.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625953	True	NA	NA	False	CATAAA	-45	NA	113627090	113611683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113612248_113625608_113625730_113627037
transcript_83064.nnic	chr2	-	1047	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-44	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	34.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113625997	True	NA	NA	False	CATAAA	-45	NA	113627134	113611683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113612248_113625608_113625730_113626772
transcript_83066.nnic	chr2	-	952	3	NNC	ENSG00000240356.6	novel	738	3	NA	NA	-57	0	at_least_one_novel_splicesite	FALSE	canonical	3	66	junction_2	3	138	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTATAAGCTTTAAGATTTT	-113626010	True	NA	NA	False	CATAAA	-45	NA	113627147	113611683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113612248_113625608_113625730_113626880
transcript_83077.nnic	chr2	-	682	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	-9947	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	29	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626010	True	NA	-3	True	ATTAAA	-27	NA	113627147	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622020_113625608_113625730_113626880
transcript_83078.nnic	chr2	-	553	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-85	-9947	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_1	22.5	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626038	True	NA	-3	True	ATTAAA	-27	NA	113627175	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622020_113625608_113625730_113627037
transcript_83079.nnic	chr2	-	1242	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-72	-9947	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	2	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626025	True	NA	-3	True	ATTAAA	-27	NA	113627162	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622162_113625608_113625730_113626477
transcript_83081.nnic	chr2	-	873	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-55	-9947	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_2	0.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626008	True	NA	-3	True	ATTAAA	-27	NA	113627145	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622162_113625608_113625730_113626829
transcript_83082.nnic	chr2	-	824	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-57	-9947	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	22.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626010	True	NA	-3	True	ATTAAA	-27	NA	113627147	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622162_113625608_113625730_113626880
transcript_83083.nnic	chr2	-	695	3	NNC	ENSG00000240356.6	novel	2078	3	NA	NA	-85	-9947	at_least_one_novel_splicesite	FALSE	canonical	3	21	junction_1	16	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	-113626038	True	NA	-3	True	ATTAAA	-27	NA	113627175	113621725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113622162_113625608_113625730_113627037
transcript_83084.nnic	chr2	+	1091	10	NNC	ENSG00000144134.19	novel	1118	10	NA	NA	-5	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_9	55.1825254144019	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626836	True	NA	12	True	AGTAAA	-17	NA	113627234	113643392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030_113642109_113643189
transcript_83085.known	chr2	+	1052	10	FSM	ENSG00000144134.19	ENST00000393166.7	1052	10	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_9	58.0129827955735	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACATTGAGTAAATGTATGTG	113626908	True	NA	11	True	AGTAAA	-16	NA	113627306	113643391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641355_113641451_113641780_113641865_113642030_113642146_113643189
transcript_83088.known	chr2	+	2141	9	FSM	ENSG00000144134.19	ENST00000683472.1	2141	9	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_5	49.7240824450286	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626867	True	NA	12	True	AGTAAA	-17	NA	113627265	113643392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113640893_113641006_113641352_113641451_113641780_113641865_113642030
transcript_83093.known	chr2	+	1944	8	FSM	ENSG00000144134.19	ENST00000452831.5	1944	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	63.9093746117524	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTATTAATAGGGTTTTG	113626884	True	NA	-52	True	NA	NA	NA	113627282	113643328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634156_113634233_113635050_113635131_113641352_113641451_113641780_113641865_113642030
transcript_83095.known	chr2	+	623	8	FSM	ENSG00000144134.19	ENST00000376439.3	623	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_7	58.4011462006613	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAAGAGGAGAGCTAGCAGA	113626988	False	NA	NA	False	NA	NA	NA	113627386	113643231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628553_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030_113642146_113643189
transcript_83100.known	chr2	+	1979	7	FSM	ENSG00000144134.19	ENST00000409842.5	1979	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.206254514306	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	113626841	True	NA	12	True	AGTAAA	-17	NA	113627239	113643392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113641352_113641451_113641780_113641865_113642030
transcript_83108.known	chr2	+	2041	8	FSM	ENSG00000144134.19	ENST00000450954.5	2041	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	63.9361926821881	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATGACA	113626865	True	NA	-12	True	NA	NA	NA	113627263	113643368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113627401_113628549_113628714_113632914_113632945_113634152_113634233_113635050_113635131_113641352_113641481_113641780_113641865_113642030
transcript_83109.known	chr2	-	10314	16	FSM	ENSG00000115084.15	ENST00000245680.7	10314	16	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_7	10.2683981223947	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTAGTCTCTAAGATGT	-113753984	True	NA	53	True	ATTAAA	-26	NA	113756642	113706708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113715196_113717752_113717851_113719153_113719309_113723103_113723195_113725377_113725538_113729400_113729506_113731583_113731649_113734585_113734674_113735776_113735859_113742691_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
transcript_83110.known	chr2	-	1711	7	FSM	ENSG00000115084.15	ENST00000498768.1	1711	7	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	10.5672449894316	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATTATAAAATTTTTTTAA	-113753929	True	NA	NA	False	AATGAA	-25	NA	113756587	113741908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_113742880_113743712_113743795_113746276_113746340_113750424_113750569_113755164_113755307_113755453_113755545_113756369
transcript_83113.nnic	chr2	-	636	5	NNC	ENSG00000228857.3	novel	437	4	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACACATCTGTTCTCCCAC	-113890981	False	NA	NA	False	TATAAA	-4	NA	113891043	113831187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_113831429_113831529_113831586_113843263_113843354_113861463_113861562_113890892
transcript_83114.known	chr2	+	6589	12	FSM	ENSG00000115091.12	ENST00000263238.7	6589	12	0	0	0	0	multi-exon	TRUE	canonical	3	931	junction_6	77.805542728901	392	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTCCCAAATAAATTCCTG	113879444	True	NA	NA	False	NA	NA	NA	113890088	113962596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113890324_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_83119.known	chr2	+	1530	12	FSM	ENSG00000115091.12	ENST00000535589.3	1530	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	318.220698923154	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTTAATAAGTGTATCAC	113890570	False	NA	NA	False	TTTAAA	-42	NA	113890597	113957591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_113890779_113913171_113913228_113916883_113917009_113927344_113927456_113931300_113931397_113934278_113934387_113939958_113940103_113942185_113942360_113951478_113951572_113951719_113951846_113955622_113955707_113957359
transcript_83127.known	chr2	-	730	3	FSM	ENSG00000235026.7	ENST00000432658.1	730	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	3	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTATGGTGTACACAGCCC	-115161281	True	NA	0	True	AATAAA	-15	NA	115161343	115144047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_115144369_115144858_115145028_115161103
transcript_83133.nnic	chr2	-	1175	3	Antisense	novelGene_ENSG00000286370.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGCTGGTGGACTGAAAAAGG	-117622728	True	NA	NA	False	AATAAA	-15	NA	117623744	117486533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_117487117_117490976_117491059_117623234
transcript_83135.nnic	chr2	-	586	3	Antisense	novelGene_ENSG00000286370.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGAGGAATTGTATTAT	-117622748	True	NA	NA	False	AATAAA	-15	NA	117623764	117501384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_117501555_117623234_117623483_117623596
transcript_83138.nnic	chr2	-	426	3	Antisense	novelGene_ENSG00000286370.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	11.5	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTGTCCCAGTTTATCT	NA	False	NA	-7	True	AATAAA	-15	NA	117649661	117525293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_117525501_117525645_117525731_117649527
transcript_83140.nnic	chr2	-	688	2	Antisense	novelGene_ENSG00000286370.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGCTTGAGGAATTGTATTAT	-117622736	True	NA	NA	False	AATAAA	-15	NA	117623752	117501384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_117501555_117623234
transcript_83146.known	chr2	+	3753	14	FSM	ENSG00000088205.13	ENST00000263239.7	3753	14	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_7	95.4757009267574	3902	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCGTTTATGGATGCTT	117799966	True	NA	16	True	ATTAAA	-18	NA	117814690	117832377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_117814863_117817443_117817729_117819648_117819793_117821160_117821297_117821649_117821751_117821861_117822062_117822146_117822262_117824568_117824709_117824939_117825102_117825446_117825600_117826268_117826383_117828948_117829006_117829288_117829467_117830581
transcript_83147.known	chr2	-	6833	24	FSM	ENSG00000125633.11	ENST00000376300.7	6833	24	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_5	11.5211648749427	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGTGAGACTCTTTCTTGG	-118012137	True	NA	4	True	GATAAA	-16	NA	118014070	117915480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_117920397_117931036_117931151_117935494_117935580_117936701_117936740_117939028_117939112_117941188_117941298_117944023_117944087_117945528_117945583_117946810_117946883_117948104_117948187_117949321_117949396_117952372_117952436_117958364_117958482_117973907_117973995_117974849_117974901_117975187_117975281_117977993_117978031_117985968_117986070_117995445_117995503_117996263_117996363_118000820_118000933_118006721_118006817_118008544_118008659_118013953
transcript_83149.known	chr2	+	1500	1	FSM	ENSG00000279227.1	ENST00000623784.1	1500	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTCCCAAATGTGTTGT	118014158	False	NA	2	True	AATAAA	-19	NA	118014173	118015673	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118014200_118015700
transcript_83155.known	chr2	+	3185	6	FSM	ENSG00000125629.16	ENST00000485520.5	3185	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_2	128.736319661547	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	118086235	True	NA	2	True	AATAAA	-17	NA	118088473	118110997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_83164.known	chr2	+	3562	6	FSM	ENSG00000125629.16	ENST00000245787.9	3562	6	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	66.3596262798398	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCTCAGTTACCTTTATA	118086232	True	NA	2	True	AATAAA	-17	NA	118088470	118110997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118096418_118096801_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_83168.known	chr2	+	627	6	FSM	ENSG00000125629.16	ENST00000467223.5	627	6	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	157.043433482588	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAACTTCAGACTGTAAAA	118086311	True	NA	NA	False	NA	NA	NA	118088549	118108390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088667_118096418_118096427_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_83181.known	chr2	+	574	5	FSM	ENSG00000125629.16	ENST00000411929.5	574	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	127.303525088664	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGGTAGATATACCAACA	118086213	True	NA	NA	False	NA	NA	NA	118088451	118108372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118107089_118107190_118108280
transcript_83195.known	chr2	+	2100	4	FSM	ENSG00000125629.16	ENST00000471186.5	2100	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	163.766771829805	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGGGTTAAGAGTCTGTT	118086235	True	NA	1	True	ATTAAA	-13	NA	118088473	118110020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_118088542_118103196_118103322_118106736_118106904_118108280
transcript_83198.nnic	chr2	+	647	3	Antisense	novelGene_ENSG00000226856.8_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTATGTTTTGAGGTATTT	118142747	True	NA	NA	False	AATAAA	-18	NA	118142772	118334333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_118143031_118256840_118256918_118334021
transcript_83200.nnic	chr2	-	549	3	NNC	ENSG00000226856.8	novel	554	3	NA	NA	8	-1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCCTGATTTCATTTAG	-118186357	True	NA	-9	True	ATTAAA	-17	NA	118186460	118182936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_118183323_118185337_118185391_118186350
transcript_83202.nnic	chr2	-	364	3	NNC	ENSG00000226856.8	novel	554	3	NA	NA	8	-183	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	1.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTAAGGCACCATCTGTCCC	-118186357	True	NA	NA	False	ATTAAA	-16	NA	118186460	118183121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_118183323_118185337_118185391_118186350
transcript_83203.known	chr2	-	480	2	FSM	ENSG00000226856.8	ENST00000661786.2	488	2	8	0	8	0	multi-exon	FALSE	canonical	1	2	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTCATTTAGAGGATCAT	-118186337	True	NA	-1	True	ATTAAA	-25	NA	118186440	118182928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_118183323_118186354
transcript_83205.known	chr2	-	1905	2	FSM	ENSG00000144119.4	ENST00000272520.4	1905	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTCTGTTGTCTGTATGTC	-119158711	False	NA	-1	True	ATTAAA	-19	NA	119158751	119156242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119156982_119157585
transcript_83206.known	chr2	+	1871	5	FSM	ENSG00000115107.20	ENST00000393107.2	1871	5	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	22.2864869371554	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGGCTTGTGCTGTGGTGGG	119221550	True	NA	NA	False	NA	NA	NA	119223852	119263698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119223889_119245488_119245989_119247678_119248207_119254683_119254849_119263056
transcript_83215.known	chr2	-	950	7	FSM	ENSG00000186132.15	ENST00000409877.5	950	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	42.8735220023838	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATTAAGCTCTTTAT	-119366671	False	NA	NA	False	AAAACA	-24	NA	119366682	119302443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366356
transcript_83216.known	chr2	-	1150	7	FSM	ENSG00000186132.15	ENST00000409466.6	1150	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	42.8735220023838	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366368	True	NA	-13	True	AATAAA	-17	NA	119366742	119302224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119340158_119340362_119366435
transcript_83221.known	chr2	-	747	6	FSM	ENSG00000186132.15	ENST00000409523.1	747	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	36.29876030941	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACCTGTATTAAGCTCTTTAT	-119366671	False	NA	NA	False	AAAACA	-24	NA	119366682	119302443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366356
transcript_83222.known	chr2	-	685	6	FSM	ENSG00000186132.15	ENST00000334816.12	685	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.2520268049763	393	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366460	True	NA	-13	True	AATAAA	-17	NA	119366834	119302224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_119302549_119311621_119311704_119317465_119317504_119321153_119321205_119339826_119339972_119366789
transcript_83226.nnic	chr2	-	660	5	NIC	ENSG00000186132.15	novel	685	6	NA	NA	-26	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	32.2567822325786	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTGGAATATTGATTCTTA	-119366486	True	NA	-13	True	AATAAA	-17	NA	119366860	119302224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_119302549_119311621_119311704_119317465_119317504_119339826_119339972_119366789
transcript_83231.known	chr2	+	576	5	FSM	ENSG00000155368.18	ENST00000409094.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	2746.19286467648	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGACTTTCCTTGAGTAG	119341050	True	NA	-14	True	GGGGCT	-9	NA	119366988	119372481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367061_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_83232.known	chr2	+	714	5	FSM	ENSG00000155368.18	ENST00000311521.8	714	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2752.29381607415	2085	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTAGTGATCTGAGTTCTT	119341131	True	NA	51	True	ATTAAA	-24	NA	119367069	119372546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367215_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_83236.known	chr2	+	654	4	FSM	ENSG00000155368.18	ENST00000535617.5	654	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2619.87798698082	2054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	119340985	True	NA	55	True	ATTAAA	-28	NA	119366923	119372550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367091_119368187_119368306_119370739_119370803_119372244
transcript_83238.known	chr2	+	774	4	FSM	ENSG00000155368.18	ENST00000460901.1	774	4	0	0	0	0	multi-exon	FALSE	canonical	1	26	junction_1	2607.62501564589	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTAACAGATTAGGGGCTA	119341142	False	NA	-41	True	NA	NA	NA	119367080	119372454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367464_119368187_119368306_119370739_119370803_119372244
transcript_83239.known	chr2	+	620	4	FSM	ENSG00000155368.18	ENST00000627305.2	620	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2619.87798698082	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAACCAGTTAAACC	119341314	False	NA	-88	True	NA	NA	NA	119367252	119372407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367529_119368187_119368306_119370739_119370803_119372244
transcript_83240.known	chr2	+	599	4	FSM	ENSG00000155368.18	ENST00000393103.2	599	4	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	2617.99291230685	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGAAAATAACCAGTTAAACC	119367646	True	NA	-88	True	NA	NA	NA	119367676	119372407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367932_119368187_119368306_119370739_119370803_119372244
transcript_83242.known	chr2	+	564	4	FSM	ENSG00000155368.18	ENST00000355857.8	564	4	0	0	0	0	multi-exon	FALSE	canonical	3	5479	junction_3	67.4800382006083	29759	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTTTAGTGATCTGAGTT	119341038	True	NA	48	True	ATTAAA	-21	NA	119366976	119372543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367061_119368187_119368306_119370739_119370803_119372244
transcript_83243.known	chr2	+	740	5	FSM	ENSG00000155368.18	ENST00000535757.5	740	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2752.29381607415	2226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATCTGAGTTCTTGAGA	119340985	True	NA	55	True	ATTAAA	-28	NA	119366923	119372550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119367091_119367558_119367645_119368187_119368306_119370739_119370803_119372244
transcript_83244.known	chr2	+	1687	2	FSM	ENSG00000171227.7	ENST00000306406.5	1687	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTTCTGCCCAGAAGTAG	119430937	True	NA	10	True	ATTAAA	-18	NA	119431853	119438504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119431925_119436888
transcript_83247.known	chr2	+	820	2	FSM	ENSG00000171227.7	ENST00000465296.1	820	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTGAAACGGCTGCCTG	119431173	False	NA	NA	False	GGGGCT	-13	NA	119432089	119437547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119432251_119436888
transcript_8326.known	chr1	+	1045	5	FSM	ENSG00000233184.8	ENST00000446527.6	1204	5	65	94	9	-22	multi-exon	FALSE	canonical	2	5	junction_1	2.9474565306379	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCATTTTATAATGTATAAA	101025279	True	NA	-87	True	NA	NA	NA	101025918	101087171	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101075394_101075717_101077362_101077509_101083460_101083575_101086851
transcript_83276.nnic	chr2	+	388	4	NNC	ENSG00000144120.13	novel	1216	3	NA	NA	-18	1314	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	8.2192186706253	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGGTGTGGTAACTT	119673296	True	NA	4	True	AATAAA	-16	NA	119679148	119687821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_119679226_119685657_119685755_119686752_119686875_119687729
transcript_83281.nnic	chr2	+	433	4	NNC	ENSG00000144120.13	novel	1216	3	NA	NA	-12	1314	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_3	9.20144916122817	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATTTGGTGTGGTAACTT	119673302	True	NA	4	True	AATAAA	-16	NA	119679154	119687821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_119679277_119685657_119685755_119686752_119686875_119687729
transcript_83284.known	chr2	+	1216	3	FSM	ENSG00000144120.13	ENST00000409951.1	1216	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGGGAAACACCAGGCTGGA	119673350	True	NA	NA	False	NA	NA	NA	119679202	119686507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679277_119680831_119681124_119685657
transcript_83287.known	chr2	+	791	2	FSM	ENSG00000144120.13	ENST00000445518.1	791	2	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGATCAACACTAACCATCC	119673338	True	NA	NA	False	GGGGCT	-37	NA	119679190	119681195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679618_119680831
transcript_83288.known	chr2	+	1346	2	FSM	ENSG00000144120.13	ENST00000401466.5	1346	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673314	True	NA	16	True	AATAAA	-16	NA	119679166	119682118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679226_119680831
transcript_83289.known	chr2	+	1363	2	FSM	ENSG00000144120.13	ENST00000272521.7	1363	2	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	0	892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTCGTTTTTTTTTTTT	119673348	True	NA	16	True	AATAAA	-16	NA	119679200	119682118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_119679277_119680831
transcript_83293.known	chr2	+	1777	17	FSM	ENSG00000115109.14	ENST00000331393.8	1777	17	0	0	0	0	multi-exon	FALSE	canonical	3	243	junction_16	25.7727448091972	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGACAAGGAATCAAGGAAG	120009856	True	NA	NA	False	NA	NA	NA	120013118	120104399	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120013211_120019076_120019265_120042005_120042111_120073177_120073221_120074099_120074179_120075475_120075521_120075700_120075754_120076970_120077092_120077228_120077317_120078492_120078582_120087170_120087241_120090346_120090517_120091554_120091662_120093248_120093277_120100243_120100287_120100698_120100815_120104059
transcript_83303.nic	chr2	+	1932	2	ISM	ENSG00000115109.14	ENST00000331393.8	1777	17	-87	83570	-45	-53571	5prime_fragment	FALSE	canonical	3	319	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGTTTTTAAAAACGCAGT	120009769	True	NA	NA	False	NA	NA	NA	120013031	120020829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_120013211_120019076
transcript_83311.known	chr2	+	1931	5	FSM	ENSG00000144118.14	ENST00000470417.1	1931	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_2	121.717911582478	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTTTTTTTTTGAATAAAAA	120249563	True	NA	-1	True	AAAACA	-30	NA	120252874	120294676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120252981_120278617_120278713_120286066_120286083_120289579_120289758_120293140
transcript_83313.known	chr2	+	2247	5	FSM	ENSG00000144118.14	ENST00000272519.10	2247	5	0	0	0	0	multi-exon	FALSE	canonical	3	193	junction_1	56.2910960987615	627	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	120249540	True	NA	33	True	AATAAA	-17	NA	120252851	120294710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_120252981_120278617_120278779_120285873_120286083_120289579_120289758_120293140
transcript_83315.nnic	chr2	+	2092	4	NIC	ENSG00000144118.14	novel	2247	5	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	145.753978409587	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTCGGGATTTCAGCCT	120249534	True	NA	33	True	AATAAA	-17	NA	120252845	120294710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_120252981_120285873_120286083_120289579_120289758_120293140
transcript_83317.known	chr2	-	324	2	FSM	ENSG00000229774.1	ENST00000444963.1	324	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTTTCATGTTCTTCTT	NA	False	NA	NA	False	NA	NA	NA	120710465	120686634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_120686757_120710263
transcript_83318.known	chr2	-	708	2	FSM	ENSG00000271709.1	ENST00000603720.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTGACATTAATCCCAGG	NA	False	NA	NA	False	ATTAAA	-16	NA	120867403	120866377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_120866792_120867109
transcript_83320.known	chr2	+	682	2	FSM	ENSG00000265451.1	ENST00000577914.1	682	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAGTGTGCAACAGAAAG	121530292	False	NA	NA	False	ACTAAA	-20	NA	121530421	121532705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121530776_121532377
transcript_83339.known	chr2	+	1232	4	FSM	ENSG00000236859.8	ENST00000662168.1	1232	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.67241208569794	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	NA	False	NA	5	True	AATAAA	-18	NA	121649620	121728563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649737_121650467_121650683_121705767_121705908_121727802
transcript_83341.known	chr2	+	1416	4	FSM	ENSG00000236859.8	ENST00000419902.3	1416	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	11.4406682011537	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCATATCTTTTCTTTCTAA	121650057	False	NA	5	True	AATAAA	-18	NA	121650081	121728563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121650382_121650467_121650683_121705767_121705908_121727802
transcript_83350.known	chr2	+	1411	3	FSM	ENSG00000236859.8	ENST00000414554.7	1414	3	2	1	2	0	multi-exon	FALSE	canonical	1	3	junction_1	13	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121649550	True	NA	19	True	ACTAAA	-19	NA	121649649	121651535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649912_121650300_121650382_121650467
transcript_83354.known	chr2	+	1273	3	FSM	ENSG00000236859.8	ENST00000439321.1	1273	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCACTTGTGTTATTTCCA	121649958	False	NA	22	True	ACTAAA	-22	NA	121649982	121651538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121650104_121650300_121650382_121650467
transcript_83362.known	chr2	+	1182	2	FSM	ENSG00000236859.8	ENST00000413904.6	1182	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121649773	False	NA	19	True	ACTAAA	-19	NA	121649797	121651535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649912_121650467
transcript_83364.known	chr2	+	1168	2	FSM	ENSG00000236859.8	ENST00000668016.1	1168	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATACCACTTGTGTTATTTC	NA	False	NA	20	True	ACTAAA	-20	NA	121649637	121651536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121649737_121650467
transcript_83366.known	chr2	+	1368	2	FSM	ENSG00000236859.8	ENST00000447668.2	1368	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATACCACTTGTGTTATTT	121650057	False	NA	19	True	ACTAAA	-19	NA	121650081	121651535	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121650382_121650467
transcript_83370.known	chr2	-	1686	7	FSM	ENSG00000155438.12	ENST00000285814.9	1686	7	0	0	0	0	multi-exon	FALSE	canonical	3	697	junction_3	58.1138728895452	2058	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGTAGCTTGTGCCTGTA	-121727080	True	NA	30	True	ATTAAA	-16	NA	121736875	121726944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_121727913_121728287_121728357_121728476_121728537_121730892_121731105_121732095_121732205_121735612_121735751_121736745
transcript_83374.known	chr2	+	2843	6	FSM	ENSG00000211460.12	ENST00000467324.5	2843	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	379.195147648279	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGTGTGCTGCTGTAAGAA	121742247	True	NA	31	True	AATAAA	-23	NA	121755658	121767294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755954_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_83377.known	chr2	+	1436	6	FSM	ENSG00000211460.12	ENST00000409193.1	1436	6	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	195.00153845547	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGACTGTTGATGTACTG	121742759	False	NA	NA	False	NA	NA	NA	121756170	121765661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121756692_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_83380.known	chr2	+	605	5	FSM	ENSG00000211460.12	ENST00000495112.1	605	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	407.398070073976	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAAGAAAGTAGAGGAAGTG	121742273	True	NA	NA	False	NA	NA	NA	121755684	121765284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_83388.known	chr2	+	1118	3	FSM	ENSG00000211460.12	ENST00000498545.5	1118	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	488.5	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTATTAAGGGATTTA	121742248	True	NA	26	True	ATTAAA	-36	NA	121755659	121765985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121763004_121763085_121765133
transcript_83391.known	chr2	+	3302	6	FSM	ENSG00000211460.12	ENST00000389682.8	3302	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	382.375940665728	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTGTCCTCCTTTTCAG	121742239	True	NA	NA	False	ATTAAA	-29	NA	121755650	121767853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121757239_121757334_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_83392.known	chr2	+	2717	6	FSM	ENSG00000211460.12	ENST00000490104.5	2717	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	455.970788538038	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGGTCTTGGAATTCCA	121742251	True	NA	1	True	ATTAAA	-13	NA	121755662	121767179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_121755846_121757239_121757435_121758709_121758807_121761408_121761525_121763004_121763085_121765133
transcript_83394.nnic	chr2	+	400	2	NNC	ENSG00000224655.7	novel	1324	5	NA	NA	11369	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGCCACTAAGTTTTGTGGG	NA	False	NA	NA	False	AATAAA	-11	NA	121803734	121809952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_121803811_121809628
transcript_83395.known	chr2	+	1018	4	FSM	ENSG00000136732.16	ENST00000259254.9	1018	4	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_2	24.4948974278318	676	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTCCGAGTCCAACAGTA	126653994	True	NA	15	True	AATAAA	-17	NA	126656157	126696667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126656313_126690254_126690312_126693863_126693948_126695945
transcript_83396.known	chr2	+	932	3	FSM	ENSG00000136732.16	ENST00000409836.3	932	3	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	99.5	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGAGCATTCCGAGTCCAACA	126654020	True	NA	12	True	AATAAA	-14	NA	126656183	126696664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126656313_126693863_126693948_126695945
transcript_83397.known	chr2	+	1341	2	FSM	ENSG00000136732.16	ENST00000484700.2	1341	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTACTTCATCTTGTTTTT	126653969	True	NA	NA	False	AATAAA	-16	NA	126656132	126658767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_126656313_126657606
transcript_8340.known	chr1	+	587	4	FSM	ENSG00000233184.8	ENST00000656224.2	882	4	182	113	88	31	multi-exon	FALSE	canonical	1	3	junction_1	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTTTAGGGAATTAAATCA	101025399	False	NA	NA	False	NA	NA	NA	101026038	101087155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101077362_101077509_101083460_101083575_101086851
transcript_83400.known	chr2	-	2143	14	FSM	ENSG00000136717.15	ENST00000409400.1	2143	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_8	39.7579957348465	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTCAGAAAACGTGTGTGT	-127107265	False	NA	-20	True	GATAAA	-3	NA	127107278	127048037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127048634_127050420_127050523_127050801_127050913_127051153_127051244_127059010_127059156_127062114_127062198_127063570_127063647_127063932_127064019_127068923_127069032_127069994_127070091_127070552_127070648_127070761_127070817_127076625_127076707_127106859
transcript_83401.known	chr2	-	2327	8	FSM	ENSG00000186684.14	ENST00000409327.2	2327	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_7	6.79135104228841	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAATAAAATAAAATAAAAT	-127220019	True	NA	NA	False	NA	NA	NA	127220313	127186409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127187388_127193093_127193298_127193788_127193868_127195334_127195502_127199375_127199540_127201121_127201332_127203371_127203572_127219988
transcript_83404.known	chr2	-	2345	15	FSM	ENSG00000163161.14	ENST00000644317.1	2345	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	98.6581399147002	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGATGCATCAAGGGC	-127289073	True	NA	NA	False	NA	NA	NA	127294098	127257474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292705_127293512_127293719_127294053
transcript_83405.known	chr2	-	2718	15	FSM	ENSG00000163161.14	ENST00000285398.7	2718	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	79.007781843542	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCATTGTACAAGTGTTTT	-127289119	True	NA	-4	True	AATAAA	-23	NA	127294144	127257289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127290223_127290274_127292609_127292847_127293512_127293719_127294053
transcript_83407.known	chr2	-	2656	14	FSM	ENSG00000163161.14	ENST00000646654.1	2656	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	80.8002870696172	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATTGAACCAGTCTTCATT	-127289120	True	NA	-17	True	AATAAA	-10	NA	127294145	127257302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127257728_127259295_127259449_127261227_127261347_127271335_127271454_127272864_127272962_127279172_127279376_127280446_127280632_127286702_127287018_127288659_127288865_127289336_127289502_127289688_127289825_127292609_127292847_127293512_127293719_127294053
transcript_83415.nic	chr2	-	620	2	ISM	ENSG00000163161.14	ENST00000490062.1	576	3	-15	779	-2	-779	5prime_fragment	FALSE	canonical	3	289	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGTTTGTTTCCTCAAATAA	-127289143	True	NA	NA	False	AATAAA	-18	NA	127294168	127293213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_127293719_127294053
transcript_83419.known	chr2	+	489	3	FSM	ENSG00000236682.3	ENST00000692842.1	559	3	64	6	0	0	multi-exon	FALSE	canonical	3	48	junction_1	11.5	510	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTAGAGATAAATTTTTTCC	127387962	True	NA	9	True	AATAAA	-23	NA	127388241	127389411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127388312_127388880_127388999_127389110
transcript_83420.known	chr2	+	615	3	FSM	ENSG00000236682.3	ENST00000654207.2	620	3	0	5	0	-1	multi-exon	FALSE	canonical	1	2	junction_1	34.5	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTAATCTAGAGATAAATTT	127387904	True	NA	4	True	AATAAA	-18	NA	127388183	127389406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127388385_127388880_127388999_127389110
transcript_83424.known	chr2	+	1586	7	FSM	ENSG00000115718.18	ENST00000409048.1	1586	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.59861050777091	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATGGGACATTAAAGGGAC	NA	False	NA	NA	False	NA	NA	NA	127419881	127428983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127420013_127421282_127421450_127422916_127422942_127423033_127423409_127426084_127426228_127427104_127427223_127428356
transcript_83425.known	chr2	+	779	2	FSM	ENSG00000115718.18	ENST00000402125.2	779	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCGGCCTGCTGTTCTGTC	127423258	True	NA	NA	False	ATTAAA	-18	NA	127423288	127429015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_127423409_127428356
transcript_83430.known	chr2	-	2973	14	FSM	ENSG00000163166.15	ENST00000295321.9	2973	14	0	0	0	0	multi-exon	FALSE	canonical	3	428	junction_12	48.5418138547345	712	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGGGGCTGTCTCTTCA	-127520590	True	NA	-9	True	AATAAA	-15	NA	127526489	127480811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127481176_127486552_127486665_127489178_127489236_127489831_127489944_127491970_127492089_127493280_127493411_127494871_127494955_127495997_127496149_127498139_127498238_127502814_127502873_127503386_127503577_127504683_127505753_127523675_127523792_127526174
transcript_83436.known	chr2	-	1137	2	FSM	ENSG00000072163.20	ENST00000494613.5	1137	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACAGCAGCCTGCGTGGTT	NA	False	NA	-4	True	AATGAA	-16	NA	127640403	127638425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127639429_127640269
transcript_83446.known	chr2	-	9490	22	FSM	ENSG00000136709.12	ENST00000322313.9	9490	22	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_15	64.5371801293457	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTCAGACCTGTGTAACTCA	-127795429	True	NA	-6	True	AATAAA	-19	NA	127811171	127701026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127706553_127708676_127708893_127709489_127709583_127709692_127709857_127713582_127714022_127717154_127717264_127719264_127720354_127721835_127721989_127722590_127722731_127722957_127723045_127723252_127723348_127724332_127724444_127724886_127724966_127725060_127725216_127726650_127726778_127763061_127763160_127764827_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_83447.known	chr2	-	3104	6	FSM	ENSG00000136709.12	ENST00000409658.7	3104	6	0	0	0	0	multi-exon	FALSE	canonical	3	278	junction_5	23.9115035077261	434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTATAATTAATAAACCTCT	-127795429	True	NA	-40	True	NA	NA	NA	127811171	127762532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127764980_127765173_127765270_127768188_127768294_127768932_127769002_127770777_127771005_127811011
transcript_83455.known	chr2	-	5038	4	FSM	ENSG00000144231.11	ENST00000272645.9	5038	4	0	0	0	0	multi-exon	FALSE	canonical	3	954	junction_3	41.4085337420521	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGGTGTCAGATAATTTT	-127848352	True	NA	NA	False	AATAAA	-16	NA	127858155	127843552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127848186_127850589_127850686_127852924_127853106_127858027
transcript_83460.nnic	chr2	-	1726	3	NIC	ENSG00000144231.11	novel	5038	4	NA	NA	-11	40	combination_of_known_splicesites	FALSE	canonical	3	137	junction_2	448.5	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTACTTC	-127848327	True	NA	0	True	AATAAA	-23	NA	127858130	127846658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_127848186_127850589_127850686_127858027
transcript_83461.known	chr2	-	1758	3	FSM	ENSG00000144231.11	ENST00000409955.1	1758	3	0	0	0	0	multi-exon	FALSE	canonical	3	162	junction_1	396	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCTCTGGAGAAAAATAAAAT	-127848314	True	NA	-40	True	AAGAAA	-5	NA	127858117	127846698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127848186_127852924_127853106_127858027
transcript_83462.known	chr2	-	1037	2	FSM	ENSG00000144231.11	ENST00000487079.1	1037	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGCCCATAGCCCCTTGA	-127848316	True	NA	NA	False	NA	NA	NA	127858119	127847240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127848186_127858027
transcript_83464.known	chr2	-	4084	21	FSM	ENSG00000136715.19	ENST00000643581.2	4084	21	0	0	0	0	multi-exon	FALSE	canonical	2	114	junction_15	23.1915394055677	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGCAGTTTGCATCTTT	-128022318	True	NA	-7	True	AATAAA	-22	NA	128028059	127941221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_127942165_127942423_127942538_127945455_127945560_127949868_127949995_127950159_127950409_127954985_127955345_127977984_127978090_127986784_127986963_127989563_127989867_127993186_127993309_127996349_127996492_127999740_127999846_128000055_128000147_128000306_128000455_128010268_128010394_128013029_128013155_128014802_128014915_128016388_128016548_128017679_128017916_128026180_128026299_128027939
transcript_83468.known	chr2	+	10761	41	FSM	ENSG00000136731.13	ENST00000259253.11	10761	41	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	18.7281706260916	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCGCAGTCATTTGGCCTT	128082173	True	NA	39	True	AGTAAA	-22	NA	128091199	128195677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_128091416_128097428_128097565_128103931_128104015_128107937_128108069_128109633_128109747_128113083_128113259_128115123_128115221_128116264_128116344_128120355_128120457_128121198_128121299_128123185_128123247_128127360_128127453_128129028_128129180_128133140_128133261_128134875_128134962_128138716_128138853_128143093_128143226_128145802_128145968_128152783_128152905_128155488_128155588_128156391_128156416_128157251_128157347_128159513_128159721_128160459_128160592_128161137_128161269_128164729_128164826_128170287_128170391_128171204_128171285_128172572_128172763_128173780_128173940_128174772_128174859_128176813_128176899_128177831_128177921_128178467_128178570_128179785_128179871_128180889_128181073_128182129_128182291_128183674_128183790_128186682_128186800_128187448_128187615_128189716
transcript_83470.known	chr2	-	1743	3	FSM	ENSG00000229536.3	ENST00000669319.1	1743	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTCTGCTCATTACTAGGG	-129877452	True	NA	NA	False	AATAAA	-28	NA	129877529	129868134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_129869536_129872605_129872752_129877333
transcript_83471.known	chr2	-	400	3	FSM	ENSG00000214100.9	ENST00000433290.6	407	3	5	2	-1	0	multi-exon	FALSE	canonical	2	5	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGTGTCTGCTGACAG	-129934276	True	NA	NA	False	AATAAA	-18	NA	129934317	129922862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_129923000_129923557_129923682_129934178
transcript_83473.known	chr2	-	1329	8	FSM	ENSG00000152076.19	ENST00000409943.8	1329	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	16.327015298928	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-130145081	False	NA	NA	False	AATAAA	-17	NA	130145112	130139286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142184_130143268_130143314_130144746
transcript_83474.known	chr2	-	1549	8	FSM	ENSG00000152076.19	ENST00000310463.10	1549	8	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	16.4564980032391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	-130145103	False	NA	NA	False	AATAAA	-17	NA	130145134	130139286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130139691_130139890_130139948_130140022_130140097_130140178_130140372_130141157_130141297_130142132_130142382_130143268_130143314_130144746
transcript_83478.nnic	chr2	+	1265	3	NIC	ENSG00000223760.4	novel	1841	6	NA	NA	-43	3	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	2.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTATCTATCTTGAGTGTT	130129405	True	NA	NA	False	AATAAA	-27	NA	130129577	130139420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_130129799_130137637_130137872_130138610
transcript_83479.known	chr2	-	4896	20	FSM	ENSG00000136699.20	ENST00000409031.5	4896	20	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_9	202.596456286192	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTCTGGCACCTGGGCT	NA	False	NA	NA	False	AATAAA	-17	NA	130182750	130151408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130161185_130161273_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_83480.known	chr2	-	3661	19	FSM	ENSG00000136699.20	ENST00000351288.10	3661	19	0	0	0	0	multi-exon	TRUE	canonical	3	543	junction_6	63.3448576259693	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTTCTGGCACCTGGGCTC	-130168306	True	NA	NA	False	AATAAA	-18	NA	130181601	130151407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130152885_130153042_130153172_130153318_130153451_130153701_130153936_130154276_130154483_130155095_130155260_130156034_130156136_130156584_130156676_130157250_130157397_130164373_130164446_130167457_130167591_130172348_130172501_130172624_130172678_130172786_130172896_130173278_130173355_130173513_130173657_130174913_130175001_130176553_130176638_130181529
transcript_83490.known	chr2	+	455	3	FSM	ENSG00000152082.15	ENST00000425361.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	857.5	769	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGGTCCAGGTCAGATGTT	130181059	True	NA	27	True	AATAAA	-16	NA	130181736	130190713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130181798_130182626_130182776_130190468
transcript_83491.known	chr2	+	435	3	FSM	ENSG00000152082.15	ENST00000457492.5	435	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	884	162	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTTTCTGAGATGCAGA	130181094	False	NA	9	True	NA	NA	NA	130181771	130190695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130181831_130182626_130182776_130190468
transcript_83493.known	chr2	+	599	3	FSM	ENSG00000152082.15	ENST00000281871.11	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_2	32	1824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130170275	True	NA	41	True	AATAAA	-30	NA	130182261	130190727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182453_130182626_130182776_130190468
transcript_83496.known	chr2	+	401	2	FSM	ENSG00000152082.15	ENST00000455239.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_1	0	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTGTCTACCGTTTTTTTT	130170326	True	NA	43	True	AATAAA	-32	NA	130182312	130190729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182453_130190468
transcript_83498.known	chr2	+	480	2	FSM	ENSG00000152082.15	ENST00000480182.1	480	2	0	0	0	0	multi-exon	FALSE	canonical	3	1799	junction_1	0	1667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTTGTCTACCGTTTTTT	130182447	True	NA	41	True	AATAAA	-30	NA	130182554	130190727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130182776_130190468
transcript_83500.known	chr2	+	752	1	FSM	ENSG00000213225.7	ENST00000450578.1	752	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTGTTCACATTCAACAT	NA	False	NA	NA	False	AAGAAA	-44	NA	130231354	130232106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130231400_130232100
transcript_83504.known	chr2	-	1847	6	FSM	ENSG00000136710.10	ENST00000442217.5	1847	6	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_2	117.589115142516	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTTTTGTGTTTTTTGATC	-130342170	False	NA	0	True	AGTAAA	-21	NA	130342349	130338242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_83506.known	chr2	-	2063	6	FSM	ENSG00000136710.10	ENST00000651709.1	2063	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	125.356132678062	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGTAACCACTACCCAACTT	-130342520	True	NA	-15	True	AGTAAA	-6	NA	130342699	130338257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130339559_130339763_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_83509.known	chr2	-	1769	5	FSM	ENSG00000136710.10	ENST00000259229.7	1769	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_4	21.4592637338749	657	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTCTTGAACTTTAACATAA	-130338985	True	NA	NA	False	AATACA	-20	NA	130342164	130337932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342014
transcript_83511.known	chr2	-	1247	5	FSM	ENSG00000136710.10	ENST00000409127.1	1247	5	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_4	112.174807777861	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTTCTGTTCTGGGA	-130342145	False	NA	NA	False	NA	NA	NA	130342324	130338495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130339233_130340907_130341040_130341666_130341750_130341840_130341945_130342133
transcript_83522.known	chr2	+	924	9	FSM	ENSG00000136718.10	ENST00000428740.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	55	junction_3	371.317060441612	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCACACTCACCACTCAGTC	130336252	True	NA	NA	False	NA	NA	NA	130342923	130346467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130342963_130343085_130343195_130344628_130344726_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_8353.known	chr1	+	3944	3	FSM	ENSG00000233184.8	ENST00000659528.2	3983	3	39	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	6	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTAATTCTTTCAATGTT	101025254	True	NA	NA	False	GATAAA	-38	NA	101025893	101090513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101083460_101083575_101086851
transcript_83530.known	chr2	+	2411	9	FSM	ENSG00000136718.10	ENST00000259239.8	2411	9	0	0	0	0	multi-exon	FALSE	canonical	3	566	junction_1	148.915034499543	2411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCCATGTGTGATATGCTGT	130336225	True	NA	NA	False	ATTAAA	-23	NA	130342896	130347967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130342936_130343085_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_83531.known	chr2	+	546	3	FSM	ENSG00000136718.10	ENST00000495606.5	546	3	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_1	386	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAAGAAACAAGAAAGGAATC	130336246	True	NA	NA	False	NA	NA	NA	130342917	130345020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130342963_130343085_130343195_130344628
transcript_83532.known	chr2	+	2379	8	FSM	ENSG00000136718.10	ENST00000460766.5	2379	8	0	0	0	0	multi-exon	FALSE	canonical	3	867	junction_3	63.539478327434	2318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTGTGGTATTTTGT	130336250	True	NA	21	True	AATAAA	-19	NA	130342921	130347810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130345778_130345934_130346017_130346113_130346200_130346275_130346355
transcript_83533.known	chr2	+	1793	7	FSM	ENSG00000136718.10	ENST00000462392.5	1793	7	0	0	0	0	multi-exon	FALSE	canonical	2	27	junction_4	357.90579145294	1314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTTTTAATAACAGCTATC	130336222	True	NA	NA	False	NA	NA	NA	130342893	130347351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130343195_130344628_130344713_130345375_130345486_130345566_130345700_130346017_130346113_130346200_130346275_130346355
transcript_83535.nic	chr2	+	737	5	NIC	ENSG00000072135.13	novel	785	9	NA	NA	19	0	combination_of_known_junctions	FALSE	canonical	3	11	junction_2	38.3079626187559	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATTCTGGGAATCA	130355506	True	NA	9	True	ATTAAA	-25	NA	130356084	130370427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_130356201_130358866_130358976_130369132_130369202_130369764_130369828_130370047
transcript_83537.known	chr2	+	460	4	FSM	ENSG00000072135.13	ENST00000489215.5	460	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	45.5802101306648	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGACAGAGCATGGAGGGG	130355476	True	NA	NA	False	NA	NA	NA	130356054	130370229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130356201_130369132_130369202_130369764_130369828_130370047
transcript_83540.nnic	chr2	+	1022	2	NIC	ENSG00000072135.13	novel	993	9	NA	NA	58	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGAGGTCTGTTTTTCCT	130372462	True	NA	11	True	AATAAA	-17	NA	130372665	130375405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_130372948_130374665
transcript_83541.known	chr2	+	595	4	FSM	ENSG00000072135.13	ENST00000483617.5	595	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	40.4062701404951	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTGAAGATTCTGGGAATCA	130358314	False	NA	9	True	ATTAAA	-25	NA	130358892	130370427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_130358976_130369132_130369202_130369764_130369828_130370047
transcript_83544.known	chr2	-	603	6	FSM	ENSG00000178162.8	ENST00000433703.5	603	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_4	37.7910042205814	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCTGAAGTAGTCTCAAAGG	-130427206	True	NA	NA	False	AATAGA	-14	NA	130427775	130418233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130426165_130426264_130427703
transcript_83548.known	chr2	-	555	5	FSM	ENSG00000178162.8	ENST00000423905.5	555	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	49.7267533627523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTACTTAGAGATGAATGAA	-130427173	True	NA	NA	False	NA	NA	NA	130427742	130418150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130425913_130426039_130427703
transcript_83549.nnic	chr2	-	2938	5	NIC	ENSG00000178162.8	novel	603	6	NA	NA	-580	0	intron_retention	FALSE	canonical	3	20	junction_3	50.0268677812233	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	NA	False	NA	NA	False	AATAAA	-14	NA	130428756	130416754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_130418299_130419070_130419246_130425090_130425159_130426165_130426264_130427703
transcript_83556.known	chr2	-	2070	4	FSM	ENSG00000178162.8	ENST00000424873.5	2070	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	47.5067246701863	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAAGTGAGTGGTCGTTGT	-130427969	False	NA	NA	False	AATAAA	-14	NA	130427986	130416754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130418299_130419070_130419246_130425090_130425159_130427703
transcript_83563.nnic	chr2	+	2838	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-308	288	intron_retention	FALSE	canonical	3	38	junction_2	9.98799279134702	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130692849	True	NA	NA	False	AATAAA	-19	NA	130692973	130704749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130703200
transcript_83564.nnic	chr2	+	1481	6	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-308	288	intron_retention	FALSE	canonical	2	2	junction_5	19.9358972710034	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130692849	True	NA	NA	False	AATAAA	-19	NA	130692973	130704749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_130693797_130695236_130695335_130695466_130695592_130696341_130696410_130702253_130702429_130704557
transcript_83566.nnic	chr2	+	2656	5	NNC	ENSG00000240253.6	novel	2692	6	NA	NA	-251	288	intron_retention	FALSE	canonical	3	9	junction_2	20.6321957144653	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130692906	True	NA	NA	False	AATAAA	-19	NA	130693030	130704749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_130693797_130695236_130695335_130696341_130696410_130702253_130702429_130703200
transcript_83569.nnic	chr2	+	1260	4	NNC	ENSG00000240253.6	novel	552	4	NA	NA	-310	288	intron_retention	FALSE	canonical	2	2	junction_3	23.3285709425636	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTGGTCGTTGTCATTA	130692847	True	NA	NA	False	AATAAA	-19	NA	130692971	130704749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_130693797_130696341_130696410_130702253_130702429_130704557
transcript_83570.known	chr2	-	1273	2	FSM	ENSG00000233221.7	ENST00000446213.2	1273	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTAATTCGCTCTTCTCTGA	NA	False	NA	NA	False	ATTAAA	-22	NA	130836994	130835437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_130836026_130836309
transcript_83573.known	chr2	+	4349	9	FSM	ENSG00000115762.17	ENST00000403716.5	4349	9	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_7	252.45763877332	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGTGACTTCTGTTGTCTT	NA	False	NA	24	True	ATTAAA	-24	NA	131104846	131149851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140166_131140276_131144407_131144450_131146636
transcript_83577.known	chr2	+	4208	8	FSM	ENSG00000115762.17	ENST00000234115.10	4208	8	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_6	188.915595017501	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGACTTCTGTTGTCTTT	NA	False	NA	25	True	ATTAAA	-25	NA	131104943	131149852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131132992_131140169_131140276_131146636
transcript_83581.known	chr2	+	2277	8	FSM	ENSG00000115762.17	ENST00000409158.5	2277	8	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_6	199.38220910132	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAATCCT	NA	False	NA	NA	False	NA	NA	NA	131104846	131147797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131130720_131130761_131132901_131133016_131140166_131140276_131146636
transcript_83591.known	chr2	+	1297	6	FSM	ENSG00000115762.17	ENST00000628582.2	1297	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	263.101045227874	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCATACTTGGAGAACATAT	131099454	True	NA	NA	False	NA	NA	NA	131105301	131147429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683_131126787_131140169_131140276_131146636
transcript_83596.known	chr2	+	644	4	FSM	ENSG00000115762.17	ENST00000482225.1	644	4	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_3	35.4432253360529	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGGCATAGTTGAAATAAAAT	131099481	True	NA	NA	False	NA	NA	NA	131105328	131127059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131105399_131120933_131120979_131125752_131125906_131126683
transcript_83598.known	chr2	+	1520	5	FSM	ENSG00000075886.11	ENST00000321253.7	1520	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.08972473588517	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCTCTGTGTGTCGTGCAG	131476104	True	NA	NA	False	ATTAAA	-19	NA	131476118	131482934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131476203_131478163_131478387_131479307_131479457_131480068_131480750_131482551
transcript_8360.known	chr1	+	619	2	FSM	ENSG00000233184.8	ENST00000654574.2	634	2	11	4	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTTAACTGTTTTTCTT	101025217	True	NA	7	True	AATAAA	-20	NA	101025856	101087265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101026062_101086851
transcript_83601.known	chr2	-	980	4	FSM	ENSG00000173272.16	ENST00000445782.2	980	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	760.862668291723	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGGGGGAGGAAGCTATTTA	-131483470	True	NA	-86	True	NA	NA	NA	131492387	131469808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_131470344_131472067_131472183_131491875_131492025_131492206
transcript_8361.known	chr1	-	1784	8	FSM	ENSG00000117543.22	ENST00000488789.5	1784	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	166.538590245073	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGTCTCGGGTATTTCTT	-101026045	False	NA	-23	True	ATTAAA	-16	NA	101026088	100990062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101013709_101013819_101021640_101021766_101022934_101023330_101025308_101025467_101025804
transcript_83618.known	chr2	-	382	3	FSM	ENSG00000173272.16	ENST00000410036.2	382	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	789.5	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCTCTACTGTTTTTTTT	-131492162	True	NA	-16	True	AATAAA	-32	NA	131492743	131483957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_131484219_131491875_131491973_131492719
transcript_8362.known	chr1	-	524	4	FSM	ENSG00000117543.22	ENST00000476507.1	524	4	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_3	10.4243305140746	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATACATTTAATTGT	-101021447	True	NA	NA	False	AATAAA	-22	NA	101025753	101013648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_101013819_101021640_101021766_101025308_101025467_101025682
transcript_83620.known	chr2	-	599	3	FSM	ENSG00000173272.16	ENST00000309451.7	599	3	0	0	0	0	multi-exon	FALSE	canonical	3	1579	junction_1	28	4499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTCTCTACTGTTTTTT	-131483480	True	NA	-18	True	AATAAA	-30	NA	131492397	131483959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_131484219_131491875_131492025_131492206
transcript_8363.known	chr1	-	2159	9	FSM	ENSG00000117543.22	ENST00000370105.7	2159	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	155.893994432114	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTTTATAATTTTCTTCT	-101021456	True	NA	3	True	AATAAA	-23	NA	101025762	100989622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_100990632_100992636_100992741_100995109_100995150_101001466_101001588_101013709_101013819_101021640_101021766_101022934_101023330_101025308_101025467_101025664
transcript_83631.known	chr2	+	1543	8	FSM	ENSG00000163040.15	ENST00000295171.10	1543	8	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	31.7573709907621	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	NA	False	NA	NA	False	AATAAA	-17	NA	131527832	131533666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131528221_131529646_131529692_131530578_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_83632.known	chr2	+	1290	8	FSM	ENSG00000163040.15	ENST00000409856.8	1290	8	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	28.4648010349481	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGCCTGGCTCCTCA	131527868	False	NA	NA	False	AATAAA	-17	NA	131527887	131533666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131528221_131529646_131529692_131530776_131530828_131531663_131531803_131532588_131532782_131532863_131532938_131533012_131533070_131533268
transcript_83639.known	chr2	+	2005	10	FSM	ENSG00000287151.1	ENST00000657415.1	2005	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	16.5335424120591	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCTTCTTTCACTCCCT	131681529	True	NA	NA	False	AATAAA	-21	NA	131682474	131767404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416_131722649_131733832_131733953_131750632_131750831_131751508_131751586_131766618
transcript_8364.known	chr1	+	1971	3	FSM	ENSG00000170989.10	ENST00000561748.2	1971	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAGAAATCATAATAAACT	101236507	True	NA	NA	False	AGTAAA	-10	NA	101236898	101243713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101237100_101241688_101241773_101242027
transcript_83643.known	chr2	+	2119	6	FSM	ENSG00000287151.1	ENST00000666411.1	2119	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_5	15.0811140172071	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGTTTCACAAAGAAAAAAA	131681535	True	NA	NA	False	AATGAA	-4	NA	131682480	131698401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131696868
transcript_83644.nic	chr2	+	1003	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-48	44625	-48	-266	5prime_fragment	FALSE	canonical	3	8	junction_1	12.3515181253156	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTACTTTTTATATTAATG	NA	False	NA	NA	False	AATAAA	-17	NA	131682426	131722779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_83645.nic	chr2	+	1169	6	ISM	ENSG00000287151.1	ENST00000657415.1	2005	10	-48	44459	-48	-100	5prime_fragment	FALSE	canonical	3	8	junction_1	12.3515181253156	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	NA	False	NA	6	True	AATAAA	-18	NA	131682426	131722945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_131682558_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_83650.nic	chr2	+	1201	6	NIC	ENSG00000287151.1	novel	2005	10	NA	NA	-38	-100	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	13.1240237732183	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTCATTCAGCTTTTAC	131681491	True	NA	6	True	AATAAA	-18	NA	131682436	131722945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_131682600_131684708_131684820_131686063_131686212_131686329_131686442_131688165_131688304_131722416
transcript_83653.known	chr2	-	1425	5	FSM	ENSG00000163046.16	ENST00000470729.5	1425	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.6583123951777	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCTGGAGTGCTGAC	-132257957	False	NA	-3	True	AGTAAA	-19	NA	132257969	132147590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_132148229_132150911_132150977_132154661_132154769_132156972_132157147_132257528
transcript_83655.known	chr2	+	2793	4	FSM	ENSG00000018607.8	ENST00000675302.1	2793	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGAGGAGGGTGAATCATG	132304782	True	NA	NA	False	TATAAA	-30	NA	132304805	132322666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_132304915_132309265_132309324_132312868_132312996_132320167
transcript_83656.known	chr2	-	1682	1	FSM	ENSG00000272769.1	ENST00000608279.1	1682	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCACCATTCTTCACGCCGC	-132347263	True	NA	NA	False	AATAAA	-19	NA	132347297	132345615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_132345600_132347300
transcript_83657.known	chr2	-	1033	3	FSM	ENSG00000150551.11	ENST00000345008.6	1033	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCAAGGCCAGGCTGGCAGA	NA	False	NA	NA	False	NA	NA	NA	132671579	132645786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_132646281_132668399_132668538_132671178
transcript_8366.known	chr1	+	2778	2	FSM	ENSG00000170989.10	ENST00000305352.7	2778	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTTTGTGAAGAGCATTC	101236627	True	NA	8	True	AATAAA	-17	NA	101237018	101241518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_101237100_101238821
transcript_83660.known	chr2	+	669	5	FSM	ENSG00000226953.8	ENST00000606428.2	669	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCATTAAGTAAAGGTTTGA	NA	False	NA	NA	False	AATAAA	-21	NA	133266241	133270464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133270355
transcript_83661.known	chr2	+	1188	5	FSM	ENSG00000226953.8	ENST00000670944.1	1188	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	1.4790199457749	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATGGTTTAGCAATGAGCTAG	133266322	False	NA	NA	False	TTTAAA	-31	NA	133266364	133285445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_133266437_133267272_133267425_133268355_133268443_133268915_133269042_133284694
transcript_83664.known	chr2	+	3453	2	FSM	ENSG00000287463.1	ENST00000655237.1	3453	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGACTATAAGAAATTGAGTG	NA	False	NA	NA	False	CATAAA	-15	NA	134718187	134725474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134718568_134722401
transcript_83667.known	chr2	-	3510	4	FSM	ENSG00000224043.8	ENST00000428857.2	3510	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.71547606649408	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATCAAAGCATAGCCATAT	-134918353	True	NA	NA	False	AATATA	-37	NA	134918710	134864599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_134867740_134868943_134869042_134877519_134877644_134918562
transcript_83668.known	chr2	-	636	3	FSM	ENSG00000224043.8	ENST00000413962.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGTAAAACAAGCGTCAGGAA	-134918321	True	NA	NA	False	AATATA	-7	NA	134918678	134867317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_134867740_134868943_134869042_134918562
transcript_83669.nnic	chr2	-	469	2	Intergenic	novelGene_27	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	47	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGAAGCTCCTTCCTCT	NA	False	NA	-6	True	AATAAA	-16	NA	134825998	134825384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_134825561_134825705
transcript_8367.known	chr1	-	2189	6	FSM	ENSG00000118733.17	ENST00000338858.9	2189	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.979795897113271	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGACACCTGACATAGAGT	-101846898	True	NA	NA	False	TATAAA	-18	NA	101846973	101803485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_101804916_101806075_101806183_101825025_101825246_101830671_101830828_101836878_101837026_101846844
transcript_83670.known	chr2	+	4491	10	FSM	ENSG00000082258.13	ENST00000295238.10	4491	10	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_9	73.3151492606481	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGATTGTGTGAGCTATTC	134913346	True	NA	8	True	ATTAAA	-23	NA	134918824	134957017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229_134954380_134954480
transcript_83672.known	chr2	+	723	2	FSM	ENSG00000082258.13	ENST00000464932.1	723	2	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTAATTTCTTAAGATGTC	134913364	True	NA	NA	False	NA	NA	NA	134918842	134920362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134919013_134919809
transcript_83674.known	chr2	+	6920	9	FSM	ENSG00000082258.13	ENST00000264157.10	6920	9	0	0	0	0	multi-exon	TRUE	canonical	3	316	junction_6	36.5733424094654	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAAGGCTCTAACATGTCT	134913343	True	NA	NA	False	AATAAA	-21	NA	134918821	134959342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_134919013_134919809_134919892_134936840_134936970_134939001_134939063_134942611_134942675_134946100_134946147_134947735_134947900_134952640_134952712_134953229
transcript_83675.known	chr2	+	4185	25	FSM	ENSG00000115839.19	ENST00000442034.5	4185	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_23	42.7351135549627	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TACATATCTATATATAATAT	135048669	True	NA	NA	False	AATAGA	-41	NA	135052297	135169989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135167692_135167714_135168544
transcript_83676.known	chr2	+	4891	24	FSM	ENSG00000115839.19	ENST00000264158.13	4891	24	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	18.5260252236148	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGTAGGAGTTTCTTCA	135048663	True	NA	NA	False	AATAAA	-18	NA	135052291	135170710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135052326_135052429_135052486_135058010_135058087_135090997_135091131_135093614_135093694_135113150_135113271_135115215_135115382_135120818_135120919_135124164_135124247_135126180_135126250_135126582_135126657_135129994_135130088_135130551_135130722_135132894_135132985_135133860_135134034_135135264_135135320_135135563_135135933_135150368_135150507_135153648_135153877_135162554_135162652_135162747_135162852_135162985_135163102_135164593_135164697_135168544
transcript_83682.nnic	chr2	+	667	4	NNC	ENSG00000115839.19	novel	2666	4	NA	NA	-34	26	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	64.7885449408733	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTTTTGTTTTCCAGTTGT	135048626	True	NA	0	True	AATAAA	-14	NA	135052254	135062807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_135052326_135052429_135052486_135058010_135058087_135062343
transcript_83683.known	chr2	+	1139	3	FSM	ENSG00000115839.19	ENST00000425393.1	1139	3	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	20	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCCTTATTTGTATCAATA	135048670	True	NA	NA	False	NA	NA	NA	135052298	135059066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135052326_135052429_135052486_135058010
transcript_8369.nnic	chr1	-	431	3	NNC	ENSG00000118733.17	novel	2189	6	NA	NA	-348	-20501	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	9	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATATTATCTAATATTTA	NA	False	NA	-14	True	AATAAA	-18	NA	101847321	101845590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_101845735_101846844_101846984_101847173
transcript_83690.nnic	chr2	-	1124	7	NNC	ENSG00000121988.18	novel	823	4	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_6	22.9256043177346	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135530740	False	NA	-18	True	AATAAA	-9	NA	135530755	135345135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135530641
transcript_83692.nic	chr2	-	1105	7	NIC	ENSG00000121988.18	novel	823	4	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_6	18.288581744417	66	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135531206	False	NA	-18	True	AATAAA	-9	NA	135531221	135345135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531126
transcript_83693.nnic	chr2	-	1071	7	NNC	ENSG00000121988.18	novel	823	4	NA	NA	-2	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_6	21.7057340094476	32	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAGATAATGGCAAAGTTTT	-135531205	False	NA	-18	True	AATAAA	-9	NA	135531220	135345135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_135345462_135345549_135345636_135349983_135350216_135353449_135353629_135390801_135390821_135504328_135504497_135531159
transcript_8370.nnic	chr1	-	1003	2	NNC	ENSG00000118733.17	novel	2189	6	NA	NA	-197	-19968	at_least_one_novel_splicesite	TRUE	canonical	3	18	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTTTTTGGATGTTTCTTT	NA	False	NA	NA	False	AATAAA	-33	NA	101847170	101845057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_101845735_101846844
transcript_83702.known	chr2	+	4272	23	FSM	ENSG00000048991.17	ENST00000409478.5	4272	23	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_13	45.2105496720942	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATAGGCTCACTTTGTCTTTT	135525707	True	NA	NA	False	AATAAA	-12	NA	135531500	135725266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135531634_135602499_135602709_135604805_135605017_135621493_135621609_135622653_135622733_135631717_135631778_135631860_135632002_135635889_135635999_135636087_135636184_135638617_135638656_135638738_135638790_135638895_135639123_135645378_135645528_135651729_135652033_135661269_135661394_135675331_135675487_135680172_135680325_135709432_135709537_135710058_135710232_135715549_135715695_135721923_135722007_135722468_135722554_135723936
transcript_8371.nnic	chr1	-	470	2	NNC	ENSG00000118733.17	novel	2189	6	NA	NA	-197	-20501	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTATATTATCTAATATTTA	NA	False	NA	-14	True	AATAAA	-18	NA	101847170	101845590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_101845735_101846844
transcript_83711.nic	chr2	+	588	2	ISM	ENSG00000048991.17	ENST00000483021.5	539	3	17	36508	-1	-36508	5prime_fragment	FALSE	canonical	3	5	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTATGTTTGCATCTTATT	135525678	True	NA	5	True	ATTAAA	-18	NA	135531471	135566162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135531634_135565736
transcript_83715.known	chr2	+	3771	13	FSM	ENSG00000144224.17	ENST00000272638.14	3771	13	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_3	61.9899185351941	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTCTACCTTGCATCTTGC	135735520	True	NA	NA	False	AATAAA	-16	NA	135741854	135785056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570_135770736_135772419_135772548_135776248_135776352_135778947_135779080_135780182_135780386_135782748
transcript_83721.nic	chr2	+	1045	8	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-247	14420	-126	8725	5prime_fragment	FALSE	canonical	3	421	junction_3	60.2813133126169	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CAAGAAGAAGAATTAACAAA	NA	False	NA	64	True	TATAAA	-7	NA	135741607	135770636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768_135769824_135770570
transcript_83724.nic	chr2	+	967	7	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-247	15245	-126	7900	5prime_fragment	FALSE	canonical	3	421	junction_3	61.0810026840497	185	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGGAAGAACAGGTAAAGTT	NA	False	NA	1	True	AATACA	-45	NA	135741607	135769811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817_135761912_135769768
transcript_83726.nic	chr2	+	924	6	ISM	ENSG00000144224.17	ENST00000272638.14	3771	13	-247	23145	-126	0	5prime_fragment	FALSE	canonical	3	421	junction_3	66.9059040743042	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	NA	False	NA	16	True	NA	NA	NA	135741607	135761911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_135742012_135748266_135748370_135753538_135753568_135754158_135754278_135755516_135755692_135761817
transcript_83728.known	chr2	+	1255	5	FSM	ENSG00000144224.17	ENST00000416538.5	1255	5	0	0	0	0	multi-exon	FALSE	canonical	3	426	junction_3	63.4049485450465	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGCTCTTCTTTTTGCAA	135735533	True	NA	16	True	NA	NA	NA	135741867	135761911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135742012_135748266_135748370_135753538_135754278_135755516_135755692_135761817
transcript_83731.known	chr2	+	568	4	FSM	ENSG00000144224.17	ENST00000426921.5	568	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	240.366849258009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCAGAGGACCTCAACATCC	135735451	True	NA	-14	True	NA	NA	NA	135741785	135761881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135742012_135748266_135748370_135755516_135755692_135761817
transcript_83732.known	chr2	-	3753	17	FSM	ENSG00000076003.5	ENST00000264156.3	3753	17	0	0	0	0	multi-exon	FALSE	canonical	3	732	junction_13	99.8924226042696	1092	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGAATACTCAAGTAGAT	-135861754	True	NA	-14	True	AATAAA	-20	NA	135876443	135839625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135840952_135844544_135844685_135846236_135846393_135848052_135848189_135851401_135851564_135852786_135852916_135856727_135856884_135857896_135858005_135859300_135859443_135862606_135862749_135865012_135865164_135866131_135866278_135866562_135866729_135868610_135868861_135870250_135870362_135872696_135872844_135876258
transcript_83747.known	chr2	+	768	4	FSM	ENSG00000231890.9	ENST00000438432.5	768	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	4.10960933531265	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACAGAAAACCAAACACTGC	135985108	False	NA	NA	False	NA	NA	NA	135985218	136007472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135985517_135998686_135998839_136000438_136000480_136007195
transcript_83750.known	chr2	+	442	2	FSM	ENSG00000231890.9	ENST00000444406.1	442	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACGCATACAATTGCATT	135985223	False	NA	NA	False	AATACA	-17	NA	135985333	135986136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_135985517_135985877
transcript_83751.known	chr2	-	3099	16	FSM	ENSG00000115866.11	ENST00000264161.9	3099	16	0	0	0	0	multi-exon	FALSE	canonical	3	874	junction_8	78.5526292084202	1690	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGATGTAATCTTTTTTA	-135977983	True	NA	-1	True	AATAAA	-16	NA	135985626	135905880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_135907408_135911138_135911211_135911381_135911494_135912485_135912567_135914468_135914512_135916225_135916373_135920452_135920601_135922783_135922919_135924386_135924499_135932782_135932843_135933909_135933991_135943377_135943481_135961395_135961499_135979273_135979367_135983396_135983455_135985402
transcript_83752.nnic	chr2	+	752	2	Fusion	ENSG00000231890.9_ENSG00000237262.1	novel	442	2	NA	NA	21	14	multi-exon	FALSE	canonical	0	0	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCCTGTGCCTTAATTCC	135985034	True	NA	18	True	AATAAA	-31	NA	135985144	136078527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_135985517_136078147
transcript_83753.known	chr2	-	1668	2	FSM	ENSG00000121966.7	ENST00000241393.4	1668	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGTGTTATGTTCTGATT	-136118028	True	NA	0	True	AATAAA	-18	NA	136118149	136114348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_136115913_136118045
transcript_83757.known	chr2	+	3132	6	FSM	ENSG00000150540.14	ENST00000280097.5	3132	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_5	3.26190128606002	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGACTCTTTCAGACAC	137964258	True	NA	NA	False	AATAAA	-32	NA	137964472	138016364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_137964629_137970164_137970218_138000917_138001026_138002063_138002195_138005131_138005226_138013774
transcript_83758.known	chr2	+	504	2	FSM	ENSG00000150540.14	ENST00000280096.5	504	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTTGGCATGTGGAATAAC	137964258	True	NA	NA	False	AATAAA	-24	NA	137964472	137967444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_137964629_137967096
transcript_83759.known	chr2	+	6056	11	FSM	ENSG00000144228.9	ENST00000280098.9	6056	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	2.89136645896019	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAATCATTTGATGCTATC	138501699	True	NA	NA	False	NA	NA	NA	138501769	138573547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_138502120_138550156_138550295_138550482_138550605_138550902_138551055_138552553_138552682_138559021_138559200_138559281_138559338_138560804_138560928_138564707_138564851_138564939_138564994_138568935
transcript_83764.known	chr2	-	2709	2	FSM	ENSG00000144227.5	ENST00000272641.4	2709	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGGTGGTTATTTTTTA	-138780114	True	NA	NA	False	AATAAA	-28	NA	138780390	138669156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_138671666_138780190
transcript_83768.nnic	chr2	+	696	4	NNC	ENSG00000075884.14	novel	1670	14	NA	NA	21403	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCCTCTATGTGTTCTAC	NA	False	NA	7	True	AATAAA	-14	NA	143577810	143768352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_143577902_143624132_143624268_143703418_143703525_143767988
transcript_83770.known	chr2	-	10585	12	FSM	ENSG00000121964.15	ENST00000682281.1	10585	12	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_4	23.9841545488159	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTGTATGTGTGTGTGT	-144330981	True	NA	NA	False	AATAAA	-29	NA	144332512	143938067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_83773.nic	chr2	-	2283	11	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	5	junction_5	36.1712593090149	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCACTGCAATTTTTAAT	-144330998	True	NA	-24	True	AATAAA	-13	NA	144332529	143946032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_83775.known	chr2	-	1563	10	FSM	ENSG00000121964.15	ENST00000463875.6	1563	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	29.0516780926679	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTATGATGGTTACACATG	-144330985	True	NA	NA	False	ATTAAA	-17	NA	144332516	143946826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144007181_144007536_144141881_144142056_144145571_144145740_144235675_144235738_144332438
transcript_83776.nic	chr2	-	2382	10	NIC	ENSG00000121964.15	novel	10585	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_3	31.1590899881381	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACCCACTGCAATTTTTAAT	-144330998	True	NA	-24	True	AATAAA	-13	NA	144332529	143946032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_143947136_143951981_143952074_143952772_143952844_144007181_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_83782.nnic	chr2	-	883	7	NNC	ENSG00000121964.15	novel	753	6	NA	NA	5	-2044	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	43.6832029757689	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATATGCTTTCCTTAAGTT	-144330998	True	NA	NA	False	AATAAA	-31	NA	144332529	144129967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_144130089_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_83784.known	chr2	-	586	5	FSM	ENSG00000121964.15	ENST00000429978.5	586	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	45.6145535986049	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTCTTTTTCTTCCGGCA	-144331037	True	NA	NA	False	NA	NA	NA	144332568	144178833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_144178961_144208602_144208805_144211514_144211580_144235675_144235738_144332438
transcript_83787.known	chr2	-	2209	10	FSM	ENSG00000121964.15	ENST00000409298.5	2209	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_5	38.0438343668634	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTAGCATATTCATTTACA	NA	False	NA	-7	True	AATAAA	-30	NA	144235737	143946015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_143947136_143951981_143952074_143952772_143952844_143957194_143957340_143970652_143970763_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_83788.known	chr2	-	2456	6	FSM	ENSG00000121964.15	ENST00000491448.5	2456	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	15.4012986465428	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCCCTGTCTTCCTTTGTA	NA	False	NA	NA	False	AATAAA	-23	NA	144235737	144005750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_144007536_144141881_144142056_144145571_144145740_144208602_144208805_144211514_144211580_144235675
transcript_83789.known	chr2	-	542	2	FSM	ENSG00000287115.2	ENST00000475115.4	553	2	0	11	0	-9	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATCATTAGCTGTG	NA	False	NA	NA	False	AATAAA	-14	NA	144524651	144523551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_144523829_144524386
transcript_83797.known	chr2	+	2039	5	FSM	ENSG00000204406.14	ENST00000638090.1	2039	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	4.9180788932265	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGCCGACTTATCCAAAAG	148021582	False	NA	NA	False	NA	NA	NA	148021603	148347611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148178699_148178794_148233244_148233396_148342213_148342337_148346021
transcript_83801.nnic	chr2	+	1119	4	NNC	ENSG00000204406.14	novel	1371	4	NA	NA	8	6618	intron_retention	FALSE	canonical	0	0	junction_3	6.16441400296898	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGGTTTTTTAATGTGGT	148019644	True	NA	7	True	AATAAA	-15	NA	148021018	148250986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_148021685_148178699_148178794_148233244_148233396_148250778
transcript_83803.known	chr2	+	1602	4	FSM	ENSG00000204406.14	ENST00000637997.1	1602	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTAGCCTTTGTATACT	148021429	False	NA	NA	False	AATATA	-16	NA	148021450	148072063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148053932_148054051_148054390_148054450_148070872
transcript_83804.known	chr2	+	484	4	FSM	ENSG00000204406.14	ENST00000473478.5	484	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.82842712474619	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTCCATCAAACACAGAGGAA	148021425	False	NA	NA	False	NA	NA	NA	148021436	148233327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148054390_148054450_148178699_148178794_148233244
transcript_83815.known	chr2	+	4131	2	FSM	ENSG00000204406.14	ENST00000478190.3	4131	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTCCACATTCAATAAAAG	148021225	False	NA	NA	False	NA	NA	NA	148021237	148028649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148024965
transcript_83820.known	chr2	+	324	2	FSM	ENSG00000204406.14	ENST00000470063.5	324	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTAGTAACTATAGCCC	148021433	False	NA	NA	False	ACTAAA	-2	NA	148021454	148178793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148021685_148178699
transcript_83824.known	chr2	-	6710	15	FSM	ENSG00000115947.14	ENST00000535373.5	6710	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_14	153.876043407328	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011719	True	NA	-1	True	TATAAA	-17	NA	148020747	147930396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_147981927_147982082_148020632
transcript_83826.known	chr2	-	6598	14	FSM	ENSG00000115947.14	ENST00000264169.6	6598	14	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_13	121.713505884897	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148021558	True	NA	-1	True	TATAAA	-17	NA	148021604	147930396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148021447
transcript_83832.known	chr2	-	6472	13	FSM	ENSG00000115947.14	ENST00000540442.5	6472	13	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_12	124.402460675914	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011709	True	NA	-1	True	TATAAA	-17	NA	148020737	147930396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_147972738_147972830_147973447_147973525_148020632
transcript_83836.known	chr2	+	5214	11	FSM	ENSG00000121989.15	ENST00000241416.12	5214	11	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_2	15.9527427108946	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGATTTGCATATGCAGTT	147844866	False	NA	11	True	AATAAA	-14	NA	147845028	147930822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_147845208_147896300_147896509_147899457_147899568_147899743_147899899_147915190_147915335_147917282_147917427_147918446_147918593_147920229_147920345_147922972_147923112_147926030_147926162_147927079
transcript_83838.known	chr2	-	6328	11	FSM	ENSG00000115947.14	ENST00000536575.5	6328	11	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_10	138.272231485573	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGATGAAGCTTCTTT	-148011733	True	NA	-1	True	TATAAA	-17	NA	148020761	147930396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147935699_147938145_147938214_147938297_147938394_147939139_147939249_147943435_147943523_147948050_147948225_147952372_147952525_147955346_147955396_147958297_147958384_147958790_147958867_148020632
transcript_83847.known	chr2	-	552	6	FSM	ENSG00000115947.14	ENST00000440042.1	552	6	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_5	152.642851126412	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGTAAGTATCATTTCA	-148011732	True	NA	NA	False	GATAAA	-2	NA	148020760	147958302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_147958384_147958790_147958867_147972738_147972830_147973447_147973525_147975901_147975976_148020607
transcript_83848.known	chr2	+	2957	19	FSM	ENSG00000168280.18	ENST00000678291.1	2957	19	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_8	20.0776271285008	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATTTGGTCC	148869333	True	NA	NA	False	AAAAAG	-16	NA	148875226	148998865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970_148962120_148973335_148973512_148978921_148978991_148981354_148981562_148983619_148983767_148991009_148991199_148994420_148994539_148997263_148997341_148998399
transcript_83849.nic	chr2	+	1140	11	ISM	ENSG00000168280.18	ENST00000676875.1	3315	14	328	20837	328	0	5prime_fragment	FALSE	canonical	3	143	junction_8	18.3109257002479	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGCATCTGGAGATGGA	148875531	False	NA	63	True	AAAAAG	-33	NA	148875554	148962079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_148875744_148922136_148922228_148929280_148929355_148937283_148937389_148941609_148941659_148941934_148941991_148942672_148942761_148946898_148947024_148949838_148949944_148950313_148950463_148961970
transcript_83857.known	chr2	+	1345	7	FSM	ENSG00000150556.17	ENST00000409642.8	1345	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	5.87130498460285	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCATGCTTGTGTGTTTCTT	149038456	True	NA	NA	False	AATAAA	-24	NA	149038698	149215262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149038802_149130882_149130954_149160763_149160836_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_83863.known	chr2	+	1248	6	FSM	ENSG00000150556.17	ENST00000409876.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	4.66476151587624	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAATGCATGCTTGTGTG	149038475	True	NA	NA	False	AATAAA	-18	NA	149038717	149215256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149038802_149130882_149130954_149205252_149205405_149208313_149208413_149212991_149213123_149214545
transcript_83869.known	chr2	+	4011	5	FSM	ENSG00000187123.15	ENST00000334166.9	4011	5	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_3	13.0096118312577	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGAAAAATGTCAGTTTG	149329666	True	NA	9	True	AGTAAA	-21	NA	149330586	149474138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_149330723_149437637_149437827_149449048_149449148_149468644_149468776_149470682
transcript_83870.nic	chr2	+	880	4	ISM	ENSG00000187123.15	ENST00000334166.9	4011	5	-31	5069	-31	-2026	5prime_fragment	FALSE	canonical	3	38	junction_3	14.8398861930347	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAAGAGACCAGTTATGTCC	149329635	True	NA	NA	False	AATAAA	-20	NA	149330555	149469069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_149330723_149437637_149437827_149449048_149449148_149468644
transcript_83872.nnic	chr2	+	652	3	NNC	ENSG00000187123.15	novel	4011	5	NA	NA	-31	-95296	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_2	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTTAAGGCTCTTTTCT	149329635	True	NA	5	True	ATTAAA	-22	NA	149330555	149353794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_149330723_149352841_149353127_149353594
transcript_83879.known	chr2	-	1392	8	FSM	ENSG00000168288.13	ENST00000303319.10	1392	8	0	0	0	0	multi-exon	FALSE	canonical	3	1052	junction_1	58.3822729595069	8789	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATGTGTGTTTTCATTACA	-149574029	True	NA	-36	True	AATAAA	-19	NA	149587775	149569636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_149570169_149571084_149571172_149575710_149575842_149576436_149576543_149579430_149579649_149582126_149582272_149587088_149587150_149587663
transcript_8388.nic	chr1	+	1935	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-26	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	18.2252571998312	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	NA	False	NA	NA	False	AATAAA	-21	NA	103525664	103555239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_83880.known	chr2	-	2684	6	FSM	ENSG00000115963.14	ENST00000263895.9	2684	6	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_5	105.300332383141	433	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478462	True	NA	-3	True	AATAAA	-25	NA	150487667	150468194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267_150487456_150487548
transcript_83888.nic	chr2	-	484	2	ISM	ENSG00000115963.14	ENST00000263895.9	2684	6	-70	18966	-8	-12286	5prime_fragment	FALSE	canonical	3	253	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAAAAAAAGTCTTTCTC	-150478532	True	NA	NA	False	NA	NA	NA	150487737	150487160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_150487456_150487548
transcript_83890.known	chr2	-	2777	5	FSM	ENSG00000115963.14	ENST00000375734.6	2777	5	0	0	0	0	multi-exon	FALSE	canonical	3	436	junction_1	53.2793346429927	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGATCTGTCTTTTATTAT	-150478462	True	NA	-3	True	AATAAA	-25	NA	150487667	150468194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_150470239_150471626_150471762_150474874_150474985_150486693_150486782_150487267
transcript_83892.known	chr2	-	4176	4	FSM	ENSG00000184898.7	ENST00000331426.6	4176	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.24721912892465	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATATGTGTTTAAATGTG	-151261684	True	NA	NA	False	AATAAA	-17	NA	151261863	151247939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151251665_151252754_151252856_151255532_151255744_151261724
transcript_83894.known	chr2	-	579	2	FSM	ENSG00000184898.7	ENST00000409092.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGTCAATGAATCTTCTG	-151261599	False	NA	NA	False	AATAAA	-33	NA	151261778	151260984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151261510_151261724
transcript_83895.known	chr2	-	1229	8	FSM	ENSG00000123609.11	ENST00000243346.10	1229	8	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_7	10.9376712814577	423	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATGTGTATTGGTGCCA	-151289069	True	NA	-5	True	AATAAA	-15	NA	151289668	151270469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151270876_151271625_151271733_151275483_151275671_151275757_151275865_151278827_151278991_151281947_151282044_151282867_151282955_151289592
transcript_83896.known	chr2	+	1422	6	FSM	ENSG00000123610.5	ENST00000243347.5	1422	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.632455532033676	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTGCACCTCTCTA	151357531	True	NA	NA	False	AATAAA	-15	NA	151357591	151380046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151357761_151363942_151364081_151366055_151366218_151370019_151370249_151373548_151373590_151379363
transcript_83897.known	chr2	+	7722	35	FSM	ENSG00000080345.18	ENST00000428287.6	7722	35	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	53.7550190784504	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTCTGGTGAAACATGTAA	151398699	True	NA	-67	True	NA	NA	NA	151409885	151475388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189_151420380_151422949_151423043_151428783_151428923_151433076_151433229_151435462_151435581_151436826_151437004_151437240_151437352_151438683_151438747_151440026_151440128_151441904_151441992_151443258_151443330_151443528_151443710_151445337_151445446_151446425_151446576_151451605_151451706_151454894_151455160_151456577_151456621_151457760_151457964_151458810_151458911_151459999_151460120_151461137_151461290_151462241_151462323_151462411_151462467_151462883_151466121_151467999_151468147_151468640_151468757_151469710_151469865_151473963_151474073_151474856
transcript_83902.known	chr2	+	743	7	FSM	ENSG00000080345.18	ENST00000494333.1	743	7	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	40.6150628872261	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAGTGTTCTTTTATGTAA	151398713	True	NA	NA	False	AAGAAA	-33	NA	151409899	151420379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_151409940_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_83903.nic	chr2	+	1199	7	ISM	ENSG00000080345.18	ENST00000453091.6	8053	35	23	54875	4	368	5prime_fragment	FALSE	canonical	3	50	junction_1	30.3406584561963	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTGTCTGGGCA	151398719	True	NA	NA	False	NA	NA	NA	151409905	151420747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_151410034_151410413_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_83904.nic	chr2	+	1584	6	ISM	ENSG00000080345.18	ENST00000430328.6	7992	34	-189	54641	1	368	5prime_fragment	FALSE	canonical	3	108	junction_3	11.916375287813	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAAAATCTGTCTGGGCA	151398714	True	NA	NA	False	NA	NA	NA	151409900	151420747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_151410528_151411259_151411339_151414822_151414920_151416560_151416689_151416806_151416902_151420189
transcript_8391.nic	chr1	+	2030	16	NIC	ENSG00000185946.16	novel	2144	15	NA	NA	-14	0	combination_of_known_junctions	FALSE	canonical	2	6	junction_1	22.0726074581142	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103525627	True	NA	NA	False	AATAAA	-21	NA	103525676	103555239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_103525931_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_83918.known	chr2	-	1076	7	FSM	ENSG00000162980.17	ENST00000458140.6	1076	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	274.333535844397	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGAATTTTAAGAGCTTT	-151820188	True	NA	NA	False	NA	NA	NA	151828492	151802981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151803325_151806820_151806973_151810377_151810562_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_83919.known	chr2	-	5264	6	FSM	ENSG00000162980.17	ENST00000295087.13	5264	6	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_5	24.204131878669	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTATGGCTTGTCTTAACT	-151820117	True	NA	0	True	AATAAA	-22	NA	151828421	151798796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828130
transcript_83920.known	chr2	-	747	6	FSM	ENSG00000162980.17	ENST00000428992.2	747	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	223.0187436069	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGCTTTCTCATTAGTTTT	-151820164	True	NA	NA	False	AAAACA	-23	NA	151828468	151803102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151803325_151806820_151806973_151812356_151812441_151814168_151814317_151815138_151815200_151828388
transcript_83923.known	chr2	-	8188	14	FSM	ENSG00000182389.20	ENST00000637217.1	8188	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	4.04998356341175	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTTCTATGGATTTGTTT	NA	False	NA	NA	False	AATAAA	-43	NA	151974027	151832865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151839380_151841902_151842089_151853447_151853544_151855223_151855376_151860710_151860821_151869176_151869236_151870530_151870612_151870841_151870862_151872416_151872494_151876425_151876557_151880799_151880923_151883250_151883371_151971544_151971705_151973668
transcript_83924.known	chr2	-	1751	12	FSM	ENSG00000182389.20	ENST00000637491.1	1751	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	4.37876166501538	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAGTAAGGGGCAAAAAAAAA	-151973879	True	NA	NA	False	NA	NA	NA	151973933	151838989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_151839380_151841902_151842089_151853447_151853544_151855223_151855376_151860710_151860821_151870530_151870612_151870841_151870862_151872416_151872494_151876425_151876557_151880799_151880923_151883250_151883371_151973668
transcript_83928.known	chr2	-	5472	14	FSM	ENSG00000115145.10	ENST00000263904.5	5472	14	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4.64987115683305	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTGTTATCTGTAATTT	-152175752	False	NA	0	True	AATAAA	-17	NA	152175763	152116800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152120803_152123765_152123936_152126225_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_83929.known	chr2	-	1488	12	FSM	ENSG00000115145.10	ENST00000482997.5	1488	12	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	4.97431418920162	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGATGAAAAGACCATTAAAT	-152174487	True	NA	NA	False	AATACA	-21	NA	152175729	152126003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152126380_152132113_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_83930.nic	chr2	-	1105	7	ISM	ENSG00000115145.10	ENST00000463854.5	1364	11	-43	11694	-29	321	5prime_fragment	FALSE	canonical	3	44	junction_6	2.21108319357027	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGGGAAACATGTAAATACT	-152175781	False	NA	NA	False	ATTAAA	-22	NA	152175792	152143575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_83932.known	chr2	-	1364	11	FSM	ENSG00000115145.10	ENST00000463854.5	1364	11	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	4.54422710700071	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTAACCAGTCTGTTCTA	-152174507	True	NA	NA	False	AATAAA	-17	NA	152175749	152131881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152132169_152133172_152133261_152133401_152133485_152135508_152135604_152143826_152144014_152144887_152144958_152147161_152147309_152148023_152148123_152148224_152148301_152150144_152150230_152175602
transcript_8395.known	chr1	+	686	6	FSM	ENSG00000185946.16	ENST00000531883.5	686	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	25.0679077706936	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTAGAATAAAACTTTT	103524382	True	NA	NA	False	NA	NA	NA	103525696	103535441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329
transcript_83962.known	chr2	+	1308	4	FSM	ENSG00000177917.12	ENST00000686839.1	1308	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	320.350849330334	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATGTGAGAATGATT	152717861	False	NA	9	True	AATAAA	-15	NA	152717892	152760764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_152717996_152720532_152720587_152734993_152735127_152759746
transcript_83968.known	chr2	-	496	4	FSM	ENSG00000196504.19	ENST00000450303.6	496	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	461.203498107578	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTGCCTCTGTAGTAC	-152717832	False	NA	-53	True	NA	NA	NA	152717932	152694436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152694623_152715994_152716127_152717355_152717432_152717830
transcript_8397.nic	chr1	+	559	5	ISM	ENSG00000185946.16	ENST00000531883.5	686	6	-32	631	-26	-631	5prime_fragment	FALSE	canonical	3	24	junction_1	27.937430089398	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACTTGGTTATTTAACAGT	NA	False	NA	NA	False	GATAAA	-10	NA	103525664	103534810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_103525824_103526066_103526263_103527694_103527743_103533738_103533858_103534773
transcript_83977.known	chr2	-	8048	26	FSM	ENSG00000196504.19	ENST00000410080.8	8048	26	0	0	0	0	multi-exon	TRUE	canonical	3	763	junction_25	103.416439698918	846	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	CTTAAAAAAAAAAAAAAAAC	-152716153	True	NA	NA	False	GATAAA	-5	NA	152717981	152651592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152656399_152657888_152658021_152658947_152659010_152659092_152659190_152659269_152659357_152662602_152662699_152663034_152663173_152663654_152663772_152663875_152663968_152664137_152664253_152669136_152669271_152670230_152670382_152671272_152671382_152672458_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717355
transcript_83978.known	chr2	-	1408	13	FSM	ENSG00000196504.19	ENST00000545856.7	1408	13	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_12	196.605498962319	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAGAAGAAAAAGAAGAA	-152700871	True	NA	-104	True	TATAAA	-11	NA	152717457	152672564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152672624_152672977_152673043_152673597_152673707_152676404_152676780_152677450_152677476_152679055_152679110_152679351_152679473_152681225_152681337_152690961_152690979_152693037_152693069_152694541_152694623_152715994_152716127_152717229
transcript_83979.known	chr2	+	3242	4	FSM	ENSG00000177917.12	ENST00000326446.10	3242	4	0	0	0	0	multi-exon	FALSE	canonical	3	707	junction_2	33.0689515339624	850	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGCTTTTGTCATTTGC	152709428	True	NA	16	True	AATAAA	-28	NA	152718619	152762396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_152719025_152720532_152720587_152734993_152735127_152759746
transcript_83980.known	chr2	-	569	3	FSM	ENSG00000196504.19	ENST00000486100.1	569	3	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	344	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAAGACTGTTTTTGTTTTA	-152716169	True	NA	NA	False	NA	NA	NA	152717997	152715994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_152716127_152717355_152717626_152717830
transcript_83981.known	chr2	-	78	1	FSM	ENSG00000226338.1	ENST00000443733.1	78	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CTTTTAAAAAAAAAAAAAAA	NA	False	NA	NA	False	AATAAA	-14	NA	153208163	153208085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_153208100_153208200
transcript_83983.nnic	chr2	+	838	3	Antisense	novelGene_ENSG00000177519.4_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCTGTCTTGCCATTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	153477792	153480180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_153477963_153478273_153478363_153479601
transcript_83987.known	chr2	-	1425	1	FSM	ENSG00000177519.4	ENST00000325926.4	1425	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	541	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCCTGGCCTCCTGGTGG	-153477708	True	NA	-9	True	AATAAA	-19	NA	153478762	153477337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_153477300_153478800
transcript_84007.nnic	chr2	-	869	4	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-9	-72543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1.88561808316413	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	-156254077	True	NA	NA	False	AATAAA	-28	NA	156254959	156095323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156150484_156150583_156252035_156252129_156254777
transcript_84012.nnic	chr2	-	810	4	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-46	-72543	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	2.44948974278318	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	-156254114	True	NA	NA	False	AATAAA	-28	NA	156254996	156095323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156205381_156205439_156227966_156228005_156254777
transcript_84029.nnic	chr2	-	831	3	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-64	-72543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	-156254132	True	NA	NA	False	AATAAA	-28	NA	156255014	156095323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156150484_156150583_156254777
transcript_8403.known	chr1	+	2144	15	FSM	ENSG00000185946.16	ENST00000423855.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_14	10.6849598664168	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGTGTTTGTATTTTTTCTT	103524384	True	NA	NA	False	AATAAA	-21	NA	103525698	103555239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_103526263_103527694_103527743_103533738_103533858_103534773_103534858_103535329_103535442_103536125_103536195_103537341_103537485_103541349_103541476_103543295_103543448_103544940_103545103_103546247_103546343_103546976_103547036_103550940_103551074_103551720_103551793_103555033
transcript_84031.nnic	chr2	-	790	3	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-64	-72543	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2	20	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	-156254132	True	NA	NA	False	AATAAA	-28	NA	156255014	156095323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156205381_156205439_156254777
transcript_84032.nnic	chr2	-	869	3	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-107	-72543	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	NA	False	NA	NA	False	AATAAA	-28	NA	156255057	156095323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156252035_156252129_156254777
transcript_8404.known	chr1	+	2621	1	FSM	ENSG00000198890.9	ENST00000370078.2	2621	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	97	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTAAACTTTGGTTGTA	107052410	True	NA	13	True	ATTAAA	-22	NA	107056673	107059294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_107056700_107059300
transcript_84041.nnic	chr2	-	539	3	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-107	-72873	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	18	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGAGATTGGCTTCTT	NA	False	NA	NA	False	TATAAA	-21	NA	156255057	156095653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156252035_156252129_156254777
transcript_84047.nnic	chr2	-	737	2	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-68	-72543	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	0	43	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCCTTGCCTTGTGACTGA	-156254136	True	NA	NA	False	AATAAA	-28	NA	156255018	156095323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156254777
transcript_84048.nnic	chr2	-	407	2	NNC	ENSG00000226383.7	novel	884	5	NA	NA	-68	-72873	at_least_one_novel_splicesite	FALSE	canonical	2	15	junction_1	0	52	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTTGAGATTGGCTTCTT	-156254136	True	NA	NA	False	TATAAA	-21	NA	156255018	156095653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_156095820_156254777
transcript_84050.nnic	chr2	+	902	3	Antisense	novelGene_ENSG00000153234.15_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCAGAGAGTGTAAATGATTA	NA	False	NA	NA	False	AATAAA	-34	NA	156341802	156367483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_156341921_156360991_156361093_156366800
transcript_84053.nnic	chr2	-	682	2	Genic_Genomic	ENSG00000230562.3	novel	691	1	NA	NA	-91	-61	multi-exon	FALSE	canonical	0	0	junction_1	0	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCATAAGAAACACAGTAA	NA	False	NA	NA	False	AATATA	-30	NA	157380505	157379784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_157380068_157380106
transcript_8406.known	chr1	-	4249	10	FSM	ENSG00000085491.17	ENST00000565488.6	4249	10	0	0	0	0	multi-exon	TRUE	canonical	3	306	junction_8	29.8775277870621	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATTGTACTTTACAGTATTT	-108195386	True	NA	NA	False	AATAAA	-15	NA	108200343	108134042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108136838_108139057_108139209_108143542_108143711_108148278_108148387_108154982_108155136_108157461_108157621_108161181_108161294_108181940_108182029_108185827_108185955_108199955
transcript_84060.known	chr2	-	3332	11	FSM	ENSG00000115170.16	ENST00000434821.7	3332	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_6	11.7919464042201	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTGAAATTGTTTTTCAAA	-157875401	True	NA	-10	True	AATAAA	-17	NA	157876330	157736445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_157737666_157738439_157738571_157760879_157761078_157765920_157766197_157770367_157770515_157774087_157774188_157778130_157778343_157780336_157780601_157799426_157799501_157818384_157818560_157875795
transcript_84062.known	chr2	-	1786	12	FSM	ENSG00000153237.18	ENST00000448656.5	1786	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	2.14745669291231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGATTCTTAGAATTT	-158456466	False	NA	NA	False	ATTAAA	-16	NA	158456566	158171973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158172260_158176520_158176662_158178878_158178997_158220594_158220714_158250771_158250913_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158340597_158340681_158358448_158358571_158456414
transcript_84064.known	chr2	-	3130	14	FSM	ENSG00000153237.18	ENST00000283233.10	3130	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	1.90297182720815	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTATGGGCAATATCTTTA	-158456653	False	NA	NA	False	AATAAA	-43	NA	158456753	158171072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158172260_158176520_158176662_158178878_158178997_158220594_158220714_158250771_158250913_158309432_158309640_158313755_158313895_158338725_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_84069.known	chr2	-	1160	7	FSM	ENSG00000153237.18	ENST00000409889.1	1160	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	2.26691175145591	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	-158456516	True	NA	NA	False	AATAAA	-14	NA	158456702	158338592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_158338908_158338989_158339086_158340241_158340394_158340597_158340681_158345214_158345319_158358448_158358571_158456414
transcript_84076.nic	chr2	-	818	4	NIC	ENSG00000153237.18	novel	1160	7	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	3.29983164553722	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	-158456552	True	NA	NA	False	AATAAA	-14	NA	158456738	158338592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158338908_158338989_158339086_158340597_158340681_158456414
transcript_84077.nnic	chr2	-	872	4	NIC	ENSG00000153237.18	novel	1160	7	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	3.2659863237109	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	-158456653	False	NA	NA	False	AATAAA	-14	NA	158456753	158338592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158338908_158338989_158339086_158358448_158358571_158456414
transcript_84078.nnic	chr2	-	731	3	NIC	ENSG00000153237.18	novel	1160	7	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGATGAATAGAGAGGG	-158456548	True	NA	NA	False	AATAAA	-14	NA	158456734	158338592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_158338908_158338989_158339086_158456414
transcript_8408.known	chr1	-	1717	9	FSM	ENSG00000162639.16	ENST00000370031.5	1717	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.3846134888376	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	-108661018	False	NA	-4	True	AATAAA	-26	NA	108661055	108648294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108649340_108649434_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_84080.nic	chr2	+	1143	5	ISM	ENSG00000115183.15	ENST00000263635.8	7501	27	-5	95855	-5	-13973	5prime_fragment	FALSE	canonical	3	40	junction_4	7.62807315119618	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACCAAATTGATGGAAATA	158967061	True	NA	NA	False	NA	NA	NA	158968634	159136804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_158968783_159001079_159001190_159065895_159065972_159097636_159097835_159136193
transcript_84087.nnic	chr2	-	1606	11	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-15	0	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_10	20.9083715291268	92	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286071	True	NA	-4	True	AATAAA	-14	NA	159286718	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159282874_159286582
transcript_84088.known	chr2	-	1920	11	FSM	ENSG00000196151.11	ENST00000409990.7	1920	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	22.7352149758915	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAGTGTCCTAAGTT	-159285945	True	NA	-7	True	AATAAA	-11	NA	159286592	159235800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286359
transcript_84089.known	chr2	-	1812	11	FSM	ENSG00000196151.11	ENST00000392796.7	1812	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	22.471315048301	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATTGCAGTGTCCTAAGTT	-159285905	False	NA	-7	True	AATAAA	-11	NA	159286552	159235800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286427
transcript_84090.nnic	chr2	-	1783	11	NNC	ENSG00000196151.11	novel	1811	11	NA	NA	-36	0	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_10	21.1662467149941	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159285981	True	NA	-4	True	AATAAA	-14	NA	159286628	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286535
transcript_84091.known	chr2	-	1811	11	FSM	ENSG00000196151.11	ENST00000359774.9	1811	11	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_7	11.3154761278525	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159271701_159271796_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_84094.nnic	chr2	-	1736	10	NIC	ENSG00000196151.11	novel	1811	11	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_6	17.7123797119904	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286075	False	NA	-4	True	AATAAA	-14	NA	159286722	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_159236191_159248371_159248513_159256195_159256376_159257757_159257865_159257944_159257986_159259809_159259844_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_84107.nnic	chr2	-	1588	8	NIC	ENSG00000196151.11	novel	1811	11	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	3	12	junction_3	25.8061849887477	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286075	False	NA	-4	True	AATAAA	-14	NA	159286722	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_159236191_159248371_159248513_159256195_159256376_159259809_159259844_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_84111.known	chr2	-	1535	7	FSM	ENSG00000196151.11	ENST00000358147.8	1535	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	26.2578030730338	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286056	True	NA	-4	True	AATAAA	-14	NA	159286703	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159236191_159248371_159248513_159256195_159256376_159275545_159275639_159279760_159279946_159282671_159283094_159286582
transcript_84115.nnic	chr2	-	1461	6	NIC	ENSG00000196151.11	novel	1535	7	NA	NA	-19	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	29.6081069979153	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCAGTGTCCTAAGTTTTT	-159286075	False	NA	-4	True	AATAAA	-14	NA	159286722	159235797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_159236191_159248371_159248513_159256195_159256376_159279760_159279946_159282671_159283094_159286582
transcript_84129.known	chr2	-	454	2	FSM	ENSG00000123636.19	ENST00000552327.1	454	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGAGATTGTAATGAATTAT	-159615407	False	NA	NA	False	AGTAAA	-5	NA	159615424	159555442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159555866_159615393
transcript_84130.known	chr2	+	1494	2	FSM	ENSG00000224152.2	ENST00000686508.1	3051	2	2	1555	2	1	multi-exon	FALSE	canonical	3	17	junction_1	0	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATAGTCGTTTTAAAGTT	159615086	True	NA	12	True	AATAAA	-19	NA	159615295	159617082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159615454_159615746
transcript_84133.nic	chr2	-	566	3	NIC	ENSG00000226266.7	novel	2520	3	NA	NA	-60	-1990	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	3	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGCTTACAATCATTATTGT	-159711667	False	NA	NA	False	AATAAA	-25	NA	159712078	159695190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_159695421_159710716_159710895_159711920
transcript_84134.known	chr2	-	2520	3	FSM	ENSG00000226266.7	ENST00000607836.1	2520	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	4.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	ACAAAAAAAGAAAAAAAATT	-159712024	True	NA	NA	False	NA	NA	NA	159712435	159693200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159695421_159710716_159710895_159712313
transcript_84135.nic	chr2	-	822	2	FSM	ENSG00000226266.7	ENST00000693353.1	407	2	-12	-403	-12	403	multi-exon	FALSE	canonical	3	15	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACATTTTGCTAGGAAT	-159712045	True	NA	NA	False	NA	NA	NA	159712456	159710215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159710895_159712313
transcript_84138.known	chr2	-	401	3	FSM	ENSG00000226266.7	ENST00000453016.5	401	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTAAATATCTGGATAAAAAT	-159712019	True	NA	NA	False	AATGAA	-15	NA	159712430	159670707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159670814_159710716_159710895_159712313
transcript_84139.known	chr2	+	6043	12	FSM	ENSG00000136536.15	ENST00000409175.6	6043	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	348.328594745472	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	159700187	True	NA	12	True	AATAAA	-27	NA	159712505	159771027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159712607_159714556_159714599_159715680_159715767_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_8414.known	chr1	-	1244	8	FSM	ENSG00000162639.16	ENST00000420055.1	1244	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	11.9863868362303	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTTCACAGAGGTTGAGAA	-108661143	False	NA	NA	False	NA	NA	NA	108661180	108648799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108660962
transcript_84146.known	chr2	+	5922	10	FSM	ENSG00000136536.15	ENST00000259050.8	5922	10	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	174.779861540167	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACAGTTGTACTTAAGTGT	159700180	True	NA	12	True	AATAAA	-27	NA	159712498	159771027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_84149.nic	chr2	+	3572	10	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-7	-10	combination_of_known_junctions	FALSE	canonical	3	324	junction_1	165.546755918265	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTGTTTGAAATGTTT	159712223	False	NA	11	True	AATAAA	-16	NA	159712449	159768573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804_159748904_159752401_159752572_159759225_159759336_159762879_159762994_159764625_159764675_159767283
transcript_8415.known	chr1	-	1874	8	FSM	ENSG00000162639.16	ENST00000370032.9	1874	8	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_7	13.6426701557867	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	108661526	108648294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108659863_108659963_108661183
transcript_84161.known	chr2	-	3932	6	FSM	ENSG00000241399.7	ENST00000259053.6	3932	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	4.2614551505325	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGATGTCTTCTTTGAGC	-159797931	True	NA	2	True	AATAAA	-16	NA	159798208	159768627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159783358_159783470_159798131
transcript_84165.nic	chr2	+	926	5	ISM	ENSG00000136536.15	ENST00000259050.8	5922	10	-238	23171	-196	-270	5prime_fragment	FALSE	canonical	3	290	junction_1	230.416335141413	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGCACTTTACAGT	159712034	True	NA	NA	False	AAGAAA	-2	NA	159712260	159747856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_159712607_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_84167.nic	chr2	+	792	5	NIC	ENSG00000136536.15	novel	5922	10	NA	NA	-7	-270	combination_of_known_junctions	FALSE	canonical	3	324	junction_1	216.690303197905	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCAATGAGCACTTTACAGT	159712223	False	NA	NA	False	AAGAAA	-2	NA	159712449	159747856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_159712662_159729008_159729176_159743060_159743254_159745769_159745938_159747804
transcript_8417.nic	chr1	-	1569	7	NIC	ENSG00000162639.16	novel	1662	8	NA	NA	-6	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	22.4251842554055	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	-108660849	True	NA	-4	True	AATAAA	-26	NA	108661099	108648294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108655585_108655699_108657450_108657580_108660962
transcript_84170.known	chr2	-	3866	5	FSM	ENSG00000241399.7	ENST00000553424.5	3866	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_4	9.40744386111339	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTCTGATGTCTTCTTTGA	-159797978	True	NA	0	True	AATAAA	-14	NA	159798255	159768629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159772054_159777937_159777965_159780004_159780179_159780881_159780999_159798131
transcript_84178.nic	chr2	+	833	2	ISM	ENSG00000136536.15	ENST00000473749.1	821	4	-17	18441	0	-13526	5prime_fragment	FALSE	canonical	3	324	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTTTCCAAAGACTTGGAA	159700187	True	NA	NA	False	NA	NA	NA	159712505	159729685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_159712662_159729008
transcript_84179.nnic	chr2	+	710	2	Intergenic	novelGene_28	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATGTATCCTATTAGTCC	159904795	True	NA	NA	False	AATAAA	-15	NA	159904829	159906331	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_159904928_159905719
transcript_8418.nic	chr1	-	1722	7	NIC	ENSG00000162639.16	novel	1874	8	NA	NA	39	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_4	23.5277613800284	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	108661487	108648294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108657450_108657580_108659863_108659963_108661183
transcript_84181.known	chr2	-	1402	2	FSM	ENSG00000054219.11	ENST00000492955.1	1402	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGCTACTTAGCCATTTTC	-159904449	True	NA	NA	False	ACTAAA	-22	NA	159904749	159902364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159903606_159904588
transcript_84184.known	chr2	-	6932	35	FSM	ENSG00000054219.11	ENST00000263636.5	6932	35	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	3.9067858628989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTGGAGTTGATCCTTCT	-159904456	True	NA	NA	False	AATAAA	-30	NA	159904756	159803354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159805223_159806972_159807141_159808448_159808572_159810525_159810676_159815404_159815574_159816805_159817033_159819725_159819921_159831669_159831787_159834043_159834212_159835479_159835646_159840728_159840956_159842244_159842375_159849979_159850141_159850361_159850468_159852200_159852341_159853272_159853353_159853629_159853698_159854359_159854536_159854903_159854940_159858361_159858477_159860820_159860890_159864838_159864921_159872450_159872594_159875443_159875644_159878323_159878494_159878632_159878722_159879258_159879370_159881082_159881241_159882123_159882316_159885152_159885294_159886419_159886531_159890212_159890378_159893913_159894085_159898687_159899060_159904588
transcript_84188.known	chr2	-	668	4	FSM	ENSG00000153246.13	ENST00000460710.2	668	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATATTTGTTACTGCATT	NA	False	NA	NA	False	AGTAAA	-25	NA	159945000	159932005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_159932299_159941745_159941993_159942126_159942160_159944905
transcript_84189.known	chr2	-	331	2	FSM	ENSG00000285373.3	ENST00000477514.1	331	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAAACCAGCCGCCCTTG	-160271239	False	NA	NA	False	NA	NA	NA	160271249	160257839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_160258047_160271125
transcript_8419.known	chr1	-	822	6	FSM	ENSG00000162639.16	ENST00000493676.1	822	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	29.7684396635094	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCACCTGCCAAGGCGGAAAG	-108661027	False	NA	NA	False	NA	NA	NA	108661064	108648893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108648992_108650210_108650389_108651029_108651210_108654715_108654851_108657450_108657580_108660962
transcript_84191.known	chr2	-	1550	14	FSM	ENSG00000153250.21	ENST00000409075.5	1550	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_13	92.747095203241	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAAACTTCAATTTT	-160408569	True	NA	NA	False	AAAAAG	-18	NA	160408609	160274459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_160274765_160275629_160275715_160277302_160277384_160278547_160278659_160281313_160281365_160284774_160284869_160284994_160285045_160286977_160287085_160300650_160300731_160303329_160303488_160313155_160313248_160318168_160318228_160367215_160367392_160408508
transcript_84195.known	chr2	+	2098	8	FSM	ENSG00000136560.14	ENST00000392749.7	2098	8	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	32.4685090762211	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGGAAGGAATCACATT	161157773	True	NA	61	True	AGTAAA	-17	NA	161160427	161236230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630_161224747_161230970_161231552_161235341
transcript_8420.nnic	chr1	-	1587	6	NIC	ENSG00000162639.16	novel	1874	8	NA	NA	39	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_3	24.6203168135587	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAACTTACCTATTTTT	NA	False	NA	-4	True	AATAAA	-26	NA	108661487	108648294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108648992_108650210_108650389_108651029_108651210_108657450_108657580_108659863_108659963_108661183
transcript_84200.nic	chr2	+	1067	6	ISM	ENSG00000136560.14	ENST00000392749.7	2098	8	-131	11176	-2	308	5prime_fragment	FALSE	canonical	3	80	junction_1	35.9165699921359	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTCAGTTGTTTTTTGGG	161157642	True	NA	NA	False	AATAAA	-21	NA	161160296	161225054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_161160487_161179613_161179762_161203486_161203596_161204674_161204794_161223914_161223992_161224630
transcript_84203.nic	chr2	+	864	5	ISM	ENSG00000136560.14	ENST00000406287.5	875	8	-36	30402	14	0	5prime_fragment	FALSE	canonical	3	4	junction_2	75.0149985002999	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	161157658	True	NA	NA	False	AATAAA	-19	NA	161160312	161204979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_161160487_161161284_161161413_161179613_161179762_161203486_161203596_161204674
transcript_84205.known	chr2	+	550	4	FSM	ENSG00000136560.14	ENST00000440506.5	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	59.2977421342687	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACTACCAAAGGTAGACAT	161157644	True	NA	NA	False	GATAAA	-25	NA	161160298	161204781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160485_161179613_161179762_161203486_161203596_161204674
transcript_84206.known	chr2	+	636	4	FSM	ENSG00000136560.14	ENST00000494976.1	636	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6.84754619472471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAAATGGCTTTTTGACATC	161157777	True	NA	NA	False	NA	NA	NA	161160431	161162890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161161284_161161413_161161812_161161908_161162532
transcript_84212.known	chr2	+	674	3	FSM	ENSG00000136560.14	ENST00000461338.5	674	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAGCAAGGGTATTGCTTC	161157689	True	NA	NA	False	AGTAAA	-43	NA	161160343	161163518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160485_161161284_161161413_161163113
transcript_84213.nic	chr2	+	770	3	ISM	ENSG00000136560.14	ENST00000406287.5	875	8	-36	55300	14	-4	5prime_fragment	FALSE	canonical	3	4	junction_2	5.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGAAGTATCACTGTCTC	161157658	True	NA	NA	False	TATAAA	-35	NA	161160312	161180081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_161160487_161161284_161161413_161179613
transcript_84215.known	chr2	+	566	3	FSM	ENSG00000136560.14	ENST00000483622.1	566	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTGCCATATGTAGCTCT	161157802	True	NA	NA	False	ATTAAA	-19	NA	161160456	161161666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160485_161160948_161161105_161161284
transcript_84216.known	chr2	+	2385	3	FSM	ENSG00000227403.3	ENST00000655684.2	2441	3	10	46	-9	-1	multi-exon	FALSE	canonical	1	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTGCATTCTCTATTCAT	161244520	True	NA	NA	False	ATTAAA	-15	NA	161244729	161249049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161244896_161245423_161245468_161246874
transcript_84219.nic	chr2	+	660	2	ISM	ENSG00000136560.14	ENST00000441987.5	533	5	-131	24691	-2	-2	5prime_fragment	FALSE	canonical	3	80	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAAGTATCACTGTCTCCA	161157642	True	NA	NA	False	TATAAA	-37	NA	161160296	161180083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_161160487_161179613
transcript_84220.known	chr2	+	427	2	FSM	ENSG00000136560.14	ENST00000477952.1	427	2	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATATATATGGTGAAAGTCTT	161157772	True	NA	NA	False	ATTAAA	-4	NA	161160426	161161651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161160487_161161284
transcript_84221.known	chr2	+	2333	2	FSM	ENSG00000227403.3	ENST00000439050.1	2333	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGCATTCTCTATTCATC	161244529	True	NA	NA	False	ATTAAA	-16	NA	161244738	161249050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161244896_161246874
transcript_84222.known	chr2	+	555	3	FSM	ENSG00000136560.14	ENST00000403609.1	555	3	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_1	16.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACTGACCGTTTTTCTAC	NA	False	NA	NA	False	AATAAA	-19	NA	161179620	161204979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161179762_161203486_161203596_161204674
transcript_84231.known	chr2	+	1567	12	FSM	ENSG00000115233.12	ENST00000409682.8	1567	12	0	0	0	0	multi-exon	FALSE	canonical	3	1501	junction_5	96.697620198566	10699	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCCTGAGATCTTTTTG	161293298	True	NA	14	True	AATAAA	-17	NA	161308424	161411717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_161308605_161316436_161316570_161318821_161318874_161367477_161367550_161367783_161367904_161370106_161370178_161371171_161371323_161385463_161385572_161391103_161391179_161395077_161395204_161408836_161408900_161411301
transcript_84239.known	chr2	+	1694	8	FSM	ENSG00000115271.11	ENST00000233612.8	1694	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	133.881305945351	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGTTCAGAAATTTTACATT	162344327	False	NA	26	True	AATAAA	-21	NA	162344337	162361122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344526_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_84245.known	chr2	+	3651	8	FSM	ENSG00000115271.11	ENST00000437150.7	3651	8	0	0	0	0	multi-exon	FALSE	canonical	3	343	junction_6	24.5639523509968	709	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTCTTTGTCTTTTTAC	162340114	True	NA	NA	False	AATAAA	-17	NA	162344131	162363123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359158_162359493_162359553_162360216
transcript_84246.known	chr2	+	597	5	FSM	ENSG00000115271.11	ENST00000479199.1	597	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	19.4084388862165	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTACTAACTAATAAAGGGAT	162340164	True	NA	NA	False	TATAAA	-44	NA	162344181	162356981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757
transcript_84247.known	chr2	+	605	4	FSM	ENSG00000115271.11	ENST00000481161.5	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	21.5458168149231	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGTCTACAGAAGCATACTC	162340116	True	NA	NA	False	NA	NA	NA	162344133	162356665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437
transcript_84248.known	chr2	+	1808	7	FSM	ENSG00000115271.11	ENST00000487445.6	1808	7	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_3	18.2976926292786	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGGCATCCTGCTCTGAATC	162340141	True	NA	NA	False	NA	NA	NA	162344158	162360971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_162344276_162347577_162347743_162352337_162352408_162356437_162356482_162356757_162356906_162359043_162359553_162360216
transcript_84249.known	chr2	-	9537	3	FSM	ENSG00000182263.14	ENST00000333129.4	9537	3	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	24.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAGTTTGATTTTTATCA	-163734304	True	NA	NA	False	AATAAA	-23	NA	163736008	163602610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_163611807_163734902_163735073_163735837
transcript_84254.known	chr2	-	2415	14	FSM	ENSG00000115290.10	ENST00000263915.8	2415	14	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_9	61.5061453609293	172	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACTGGTATTGTACCCATTA	-164620669	True	NA	NA	False	ATTAAA	-20	NA	164621482	164492416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_164493183_164494430_164494525_164497007_164497096_164497210_164497284_164497373_164497491_164502254_164502336_164508454_164508551_164508741_164508853_164521979_164522118_164525003_164525079_164527013_164527136_164547659_164547817_164619686_164619820_164621118
transcript_84262.known	chr2	+	9456	27	FSM	ENSG00000136531.19	ENST00000636662.2	9456	27	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.49357598761135	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGCATCTTTTCTCCTT	NA	False	NA	NA	False	AATAAA	-20	NA	165294036	165392310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_165294136_165295772_165296893_165297016_165297136_165307847_165307938_165308665_165308795_165309351_165309444_165310322_165310596_165312024_165312089_165313619_165313762_165313901_165314109_165315470_165315759_165323155_165323501_165326851_165326985_165331329_165331569_165342295_165342470_165344554_165344912_165354191_165354672_165365142_165365264_165367216_165367372_165370125_165370300_165373224_165373348_165374684_165374967_165377596_165377651_165380591_165380730_165381092_165381198_165386745_165387017_165388628
transcript_84267.nnic	chr2	+	631	5	NNC	ENSG00000178662.16	novel	499	4	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	9.62743475698485	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTATTTGTGGATTT	165468141	True	NA	5	True	AATAAA	-18	NA	165469696	165566981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_165469741_165470751_165470875_165494758_165494929_165517872_165517962_165566776
transcript_84269.nnic	chr2	+	417	4	NNC	ENSG00000178662.16	novel	499	4	NA	NA	-22	-36475	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_3	12.0277457017791	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTATTTTAGCATTGTTT	165468120	True	NA	NA	False	AATAAA	-15	NA	165469675	165530506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_165469741_165494758_165494929_165517872_165517962_165530413
transcript_84273.known	chr2	+	499	4	FSM	ENSG00000178662.16	ENST00000464503.1	499	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	6.37704215656966	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCAAGTATTTGTGGATTT	165468150	True	NA	5	True	AATAAA	-18	NA	165469705	165566981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_165469741_165494758_165494929_165517872_165517962_165566776
transcript_84277.known	chr2	-	3436	11	FSM	ENSG00000115339.14	ENST00000392701.8	3436	11	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_6	19.9170780989582	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAGAATGATGTTTTAAAAAA	-165791531	True	NA	NA	False	GATAAA	-18	NA	165794247	165747587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165748904_165749741_165749895_165754626_165754729_165754931_165755064_165757046_165757248_165758746_165758865_165759335_165759571_165761904_165762055_165764883_165765057_165770185_165770809_165794014
transcript_84278.nic	chr2	-	1291	2	ISM	ENSG00000115339.14	ENST00000392701.8	3436	11	-32	22195	-32	648	5prime_fragment	FALSE	canonical	3	149	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCAAGATTTTGGAACTGT	-165791563	True	NA	-4	True	AATAAA	-15	NA	165794279	165769782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_165770809_165794014
transcript_84279.nic	chr2	-	789	2	ISM	ENSG00000115339.14	ENST00000392701.8	3436	11	-32	22697	-32	146	5prime_fragment	FALSE	canonical	3	149	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGAAAAGGAACGTGGGGAAG	-165791563	True	NA	NA	False	NA	NA	NA	165794279	165770284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_165770809_165794014
transcript_84280.known	chr2	-	5415	29	FSM	ENSG00000123607.16	ENST00000243344.8	5415	29	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_19	12.7201030030485	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGCTTTTTATTAAAT	-165951277	True	NA	1	True	AATAAA	-17	NA	165953776	165873361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165874833_165876164_165876233_165880678_165880800_165883793_165884019_165888278_165888475_165890478_165890641_165890837_165890989_165898685_165898768_165899769_165899881_165901721_165901911_165907677_165907785_165911326_165911466_165912513_165912625_165913573_165913647_165915200_165915440_165917256_165917482_165919275_165919434_165924548_165924679_165929134_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_84282.known	chr2	-	1844	11	FSM	ENSG00000123607.16	ENST00000464374.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	14.0317497127051	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAGAAAGGACCATT	-165951246	True	NA	NA	False	NA	NA	NA	165953745	165928716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_165929336_165929649_165929748_165930171_165930365_165931757_165931857_165932972_165933058_165941026_165941185_165943218_165943342_165945523_165945691_165949393_165949505_165949594_165949725_165953684
transcript_84287.nnic	chr2	-	1476	8	NNC	ENSG00000169432.19	novel	2283	7	NA	NA	-3	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	8.99205998963212	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTCTTATTTTACCAAATG	-166374106	True	NA	-12	True	AATAAA	-16	NA	166375972	166302051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_166302301_166303089_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_84289.known	chr2	-	2283	7	FSM	ENSG00000169432.19	ENST00000472119.2	2283	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	8.14452781524708	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATATACATCATTTTCTTAT	-166374135	True	NA	-23	True	AATAAA	-5	NA	166376001	166302062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_166303303_166304237_166304330_166305791_166305921_166306509_166306600_166306955_166307075_166311498_166311807_166375696
transcript_84293.nnic	chr2	-	401	2	NIC	ENSG00000169432.19	novel	1473	11	NA	NA	4	-5127	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGATGATGAAGAAGCCCC	-166374099	True	NA	NA	False	AAGAAA	-29	NA	166375965	166311636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_166311807_166375734
transcript_84294.nic	chr2	-	639	2	ISM	ENSG00000169432.19	ENST00000472119.2	2283	7	-168	9578	-168	-5131	5prime_fragment	FALSE	canonical	3	22	junction_1	0	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATGATGATGAAGAAG	NA	False	NA	NA	False	AAGAAA	-25	NA	166376169	166311640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_166311807_166375696
transcript_84295.known	chr2	-	837	4	FSM	ENSG00000235335.3	ENST00000430546.2	837	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGGAGTCTCACTCTGTC	NA	False	NA	NA	False	AATAAA	-30	NA	167941178	167814756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_167815232_167869739_167869981_167900731_167900783_167941108
transcript_84296.known	chr2	+	6804	10	FSM	ENSG00000172292.15	ENST00000305747.11	6804	10	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_2	13.4421485642992	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTAAGTGCCCTTTACTGT	168454738	True	NA	10	True	AATAAA	-20	NA	168456271	168775134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_168456619_168547595_168547702_168561191_168561323_168630984_168631043_168691033_168691085_168694958_168695052_168715000_168715130_168717871_168717979_168765591_168765749_168769509
transcript_84302.known	chr2	-	1342	7	FSM	ENSG00000152253.9	ENST00000282074.7	1342	7	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_4	27.8607649252892	1599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCAGCATGATTTATAATC	-168886874	True	NA	-4	True	AATAAA	-23	NA	168890430	168870890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_168871556_168873584_168873684_168876071_168876177_168877237_168877385_168889225_168889292_168889386_168889534_168890317
transcript_84306.known	chr2	+	3107	11	FSM	ENSG00000163093.12	ENST00000392663.6	3107	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	3.38969025133566	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAACGTTTTGAAAGTATT	169479382	True	NA	NA	False	AATAAA	-18	NA	169479482	169506655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169479613_169482250_169482334_169487068_169487135_169487805_169487856_169487986_169488115_169492873_169493010_169493740_169493837_169499485_169499621_169503094_169503179_169504302_169504327_169504480
transcript_84309.known	chr2	-	1850	5	FSM	ENSG00000138399.18	ENST00000445210.1	1850	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	111.285668439382	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-169569302	True	NA	-7	True	AGTAAA	-19	NA	169573875	169560529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169572995
transcript_84311.known	chr2	-	4200	15	FSM	ENSG00000138399.18	ENST00000453153.7	4200	15	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_12	112.564176706228	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGTGATATAATCCC	-169569292	True	NA	-21	True	AATAAA	-16	NA	169573865	169528507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169538012_169538142_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_84312.known	chr2	-	2791	14	FSM	ENSG00000138399.18	ENST00000453929.6	2791	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	128.216255927334	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAATAGGTACAAATGTC	-169569259	True	NA	-27	True	AATAAA	-17	NA	169573832	169529754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169529927_169530586_169530702_169531351_169531491_169537226_169537341_169540050_169540180_169544720_169544836_169546217_169546705_169555123_169555256_169557186_169557298_169560386_169560786_169563224_169563351_169569183_169569253_169571652_169572172_169573668
transcript_84313.known	chr2	-	1045	4	FSM	ENSG00000138399.18	ENST00000438035.5	1045	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	123.370264740829	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTACAATTTAATAGTTT	-169569239	True	NA	-7	True	AGTAAA	-19	NA	169573812	169560529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169560786_169563224_169563351_169571652_169572172_169573668
transcript_84316.known	chr2	+	6389	14	FSM	ENSG00000138398.17	ENST00000678721.1	6389	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	177.995412479944	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	169576028	True	NA	NA	False	ATTAAA	-1	NA	169584368	169641387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584498_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614401_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84318.known	chr2	+	6283	14	FSM	ENSG00000138398.17	ENST00000676756.1	6283	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.704345744654	611	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169576091	False	NA	NA	False	AATAAA	-16	NA	169584431	169641406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584498_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84321.known	chr2	+	6453	14	FSM	ENSG00000138398.17	ENST00000678499.1	6453	14	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	103.058953657574	628	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AACTATACTATAATAAACAG	169584624	False	NA	NA	False	ATTAAA	-3	NA	169584646	169641389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584900_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84323.known	chr2	+	7125	13	FSM	ENSG00000138398.17	ENST00000677392.1	7125	13	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_1	45.1616694652544	1079	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAACTATACTATAATAAAC	169576001	True	NA	NA	False	ATTAAA	-1	NA	169584341	169641387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84325.known	chr2	+	1507	12	FSM	ENSG00000138398.17	ENST00000462903.6	1507	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	137.613604459121	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCTTGTATTTTATTCTTT	169576046	True	NA	2	True	AATAAA	-15	NA	169584386	169633557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584498_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159
transcript_84326.known	chr2	+	6150	11	FSM	ENSG00000138398.17	ENST00000676508.1	6150	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	191.560851950496	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGGTTTTGTATTTTT	169576003	True	NA	NA	False	AATAAA	-16	NA	169584343	169641406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584491_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631774_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84329.nic	chr2	+	928	10	ISM	ENSG00000138398.17	ENST00000414307.6	1507	12	-22	2605	-22	30	5prime_fragment	FALSE	canonical	3	393	junction_1	34.4945871581307	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAAAAAGAAACATCGGAAA	NA	False	NA	NA	False	AAGAAA	-2	NA	169584319	169630914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169607103_169607149_169608670_169608759_169614463_169614494_169614584_169614725_169630773
transcript_84345.known	chr2	+	2615	13	FSM	ENSG00000138398.17	ENST00000409714.7	2615	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	139.405483711685	543	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGTTTTAATAAACTCGA	169576012	True	NA	-8	True	NA	NA	NA	169584352	169637711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169584491_169603641_169603695_169604025_169604103_169604186_169604262_169606038_169606147_169608670_169608759_169614463_169614494_169614584_169614725_169630773_169630988_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84346.known	chr2	+	982	6	FSM	ENSG00000138398.17	ENST00000482772.5	982	6	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	245.291663127796	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTCTAAACAGTTAGAATCAA	NA	False	NA	16	True	AGTAAA	-6	NA	169630849	169636814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169630988_169631598_169631648_169631765_169631934_169633159_169633248_169636091_169636229_169636412
transcript_84347.known	chr2	-	2153	9	FSM	ENSG00000154479.13	ENST00000447353.6	2153	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.92028643696715	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGTCTGGCTTATTT	-169694210	True	NA	NA	False	AATAAA	-16	NA	169694405	169645424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169646183_169649181_169649347_169650328_169650522_169654074_169654215_169662279_169662437_169674575_169674770_169674866_169675041_169681006_169681234_169694260
transcript_84351.nnic	chr2	-	695	3	NNC	ENSG00000154479.13	novel	2153	9	NA	NA	-31	-4281	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	1	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTTTTTGGTTTCCTGTAT	-169694241	False	NA	NA	False	AATAAA	-18	NA	169694436	169679217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_169679510_169681006_169681234_169694260
transcript_84353.known	chr2	+	2087	6	FSM	ENSG00000213160.10	ENST00000272797.8	2087	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	125.458519041156	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTTCCTTACCTGATAATT	169692127	True	NA	NA	False	TATAAA	-19	NA	169694490	169749804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169735012_169736228_169741384_169741538_169749421
transcript_84357.known	chr2	+	631	5	FSM	ENSG00000144362.12	ENST00000449906.5	631	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	50.3338852066876	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGTCTTTAAGTATTTGGG	169692123	True	NA	NA	False	NA	NA	NA	169694486	169701118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697864_169697983_169700945
transcript_84358.nic	chr2	+	1253	5	NIC	ENSG00000144362.12	novel	1252	5	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_4	47.4183508781147	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAAAAGTGTATCACTT	169692061	True	NA	7	True	AATAAA	-17	NA	169694424	169701706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_169694623_169695214_169695248_169697360_169697532_169697892_169697983_169700945
transcript_84363.known	chr2	+	4081	4	FSM	ENSG00000213160.10	ENST00000392647.7	4081	4	0	0	0	0	multi-exon	FALSE	canonical	3	288	junction_1	18.9267594221045	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATAGTAAGACTGCTTGAAT	169728347	True	NA	14	True	AATAAA	-15	NA	169733831	169751878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169734088_169735012_169736228_169741384_169741538_169749421
transcript_84367.nnic	chr2	+	1065	4	NNC	ENSG00000144362.12	novel	1121	4	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_1	48.0092583663702	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	169692061	True	NA	9	True	AATAAA	-19	NA	169694424	169701708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_169694523_169695214_169695248_169697360_169697532_169700945
transcript_84368.nic	chr2	+	814	4	ISM	ENSG00000213160.10	ENST00000498202.6	843	6	-63	51378	-63	-51196	5prime_fragment	FALSE	canonical	3	13	junction_3	43.9418808073675	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACCTACTTAGTGTTATAT	169692061	True	NA	7	True	ATTAAA	-17	NA	169694424	169698304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_169694623_169695214_169695248_169697360_169697532_169697892
transcript_84370.known	chr2	+	1121	4	FSM	ENSG00000144362.12	ENST00000359744.8	1121	4	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_1	15.084944665313	632	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAAGTGTATCACTTAA	169692105	True	NA	9	True	AATAAA	-19	NA	169694468	169701708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694623_169695214_169695248_169697360_169697532_169700945
transcript_84375.known	chr2	+	908	4	FSM	ENSG00000144362.12	ENST00000438710.5	908	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	34.6153466286591	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAATTATCATACTCATT	169692107	True	NA	NA	False	NA	NA	NA	169694470	169701378	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169694742_169695214_169695248_169697360_169697532_169700945
transcript_84394.known	chr2	+	1782	12	FSM	ENSG00000138385.16	ENST00000409333.1	1782	12	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	993.920062635367	2773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169799229	False	NA	27	True	AATAAA	-28	NA	169799278	169812064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169799517_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_8440.known	chr1	+	3728	7	FSM	ENSG00000134186.12	ENST00000370021.1	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	140.800982477633	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATATGCTTTTTTCTTTTT	108686165	True	NA	11	True	ATTAAA	-17	NA	108692340	108701803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_84400.known	chr2	-	800	8	FSM	ENSG00000138382.15	ENST00000392640.6	800	8	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_7	395.239064829562	3116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814867	True	NA	-18	True	AATAAA	-17	NA	169824931	169811756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_84410.known	chr2	-	629	6	FSM	ENSG00000138382.15	ENST00000308099.7	629	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	636.503699910692	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTAAACTACTGGTCTCCAG	-169814837	True	NA	-24	True	AATAAA	-11	NA	169824901	169811762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169821091_169821274_169821942_169822058_169824488_169824641_169824867
transcript_84411.known	chr2	+	545	5	FSM	ENSG00000138385.16	ENST00000417292.5	545	5	0	0	0	0	multi-exon	FALSE	canonical	3	175	junction_1	1373.58588646651	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGCCAGAAGTACAAAGAAAC	169756830	True	NA	-30	True	AAGAAA	-16	NA	169798878	169807030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169798977_169805473_169805578_169805664_169805840_169806784_169806893_169806970
transcript_84416.known	chr2	+	1650	12	FSM	ENSG00000138385.16	ENST00000260956.9	1650	12	0	0	0	0	multi-exon	FALSE	canonical	3	2994	junction_8	298.609892281878	17938	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTTTGATTTTTTTTTT	169756822	True	NA	27	True	AATAAA	-28	NA	169798870	169812064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664_169805840_169806784_169806893_169806970_169807072_169808481_169808554_169808859_169808903_169810282_169810424_169810857_169811045_169811182_169811324_169811667
transcript_84417.known	chr2	-	880	8	FSM	ENSG00000138382.15	ENST00000409965.5	880	8	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_7	249.242198412283	7625	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814861	True	NA	-18	True	AATAAA	-17	NA	169824925	169811756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_84418.known	chr2	-	1001	7	FSM	ENSG00000138382.15	ENST00000260953.10	1001	7	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_1	211.256360850981	1830	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814841	True	NA	-18	True	AATAAA	-17	NA	169824905	169811756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488
transcript_84419.known	chr2	-	472	6	FSM	ENSG00000138382.15	ENST00000409340.5	472	6	0	0	0	0	multi-exon	FALSE	canonical	2	28	junction_4	441.758033316883	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTACTGGTCTCCAGCACCAT	-169814750	True	NA	-18	True	AATAAA	-17	NA	169824814	169811756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169811859_169812456_169812507_169815476_169815529_169819560_169819644_169824488_169824641_169824781
transcript_84420.known	chr2	-	1370	7	FSM	ENSG00000138382.15	ENST00000410097.5	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	891	junction_6	241.79496594337	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGCAAACAAAAGTCGTTTAA	-169814810	True	NA	-75	True	TTTAAA	-6	NA	169824874	169811813	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_169812507_169815476_169815529_169819560_169819644_169821091_169821274_169821942_169822058_169824488_169824641_169824781
transcript_84421.known	chr2	+	619	4	FSM	ENSG00000138385.16	ENST00000461708.1	619	4	0	0	0	0	multi-exon	FALSE	canonical	3	3425	junction_3	100.748311262384	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTCACGTTGGAGTGCAG	169756831	True	NA	NA	False	NA	NA	NA	169798879	169806007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_169798977_169800951_169801027_169805473_169805578_169805664
transcript_84424.known	chr2	-	675	4	FSM	ENSG00000234350.6	ENST00000667568.2	699	4	24	0	-2	0	multi-exon	FALSE	canonical	1	1	junction_3	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAGCACATGTAA	-170770746	True	NA	NA	False	AATAAA	-33	NA	170770800	170723191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170723594_170727284_170727329_170727658_170727789_170770701
transcript_84426.nnic	chr2	-	539	3	NNC	ENSG00000234350.6	novel	548	5	NA	NA	15759	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTATGTGACAAGACTA	-170712015	False	NA	NA	False	AATAAA	-26	NA	170712031	170700367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_170700580_170706818_170706978_170711863
transcript_84428.known	chr2	-	695	5	FSM	ENSG00000234350.6	ENST00000655289.2	720	5	25	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAATTCAAGCACATGTAA	-170770719	True	NA	NA	False	AATAAA	-33	NA	170770773	170723191	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170723594_170726042_170726090_170727284_170727329_170727658_170727789_170770701
transcript_84429.known	chr2	-	548	5	FSM	ENSG00000234350.6	ENST00000671292.1	548	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.82915619758885	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATGCTATGTGACAAGACTA	-170770719	True	NA	NA	False	AATAAA	-26	NA	170770773	170700367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170700580_170723503_170723594_170727284_170727329_170727658_170727789_170770701
transcript_84436.known	chr2	+	1111	4	FSM	ENSG00000239467.7	ENST00000688829.1	1041	4	401	-471	61	0	multi-exon	FALSE	canonical	3	11	junction_1	8.73053390247253	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAGTGACAGAGGACCTTAT	170770986	False	NA	8	True	ATTAAA	-22	NA	170771337	170778584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771428_170777146_170777178_170777376_170777426_170777643
transcript_84438.known	chr2	+	1327	4	FSM	ENSG00000239467.7	ENST00000662201.2	1444	4	117	0	-21	0	multi-exon	FALSE	canonical	3	10	junction_1	9.20144916122817	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	170770675	True	NA	NA	False	AATAAA	-15	NA	170771026	170778729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771188_170777146_170777178_170777376_170777426_170777643
transcript_84441.known	chr2	+	1505	3	FSM	ENSG00000239467.7	ENST00000664870.2	1628	3	123	0	10	0	multi-exon	FALSE	canonical	3	3	junction_1	13.5	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTTGAGGGATAT	170770706	True	NA	NA	False	AATAAA	-15	NA	170771057	170778729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771428_170777376_170777426_170777643
transcript_84443.known	chr2	+	1291	3	FSM	ENSG00000239467.7	ENST00000662915.2	1411	3	118	2	-20	0	multi-exon	FALSE	canonical	2	3	junction_1	13.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTAGTTGTCTTTGAGGG	170770676	True	NA	NA	False	AATAAA	-11	NA	170771027	170778725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170771188_170777376_170777426_170777643
transcript_84450.nnic	chr2	+	1087	5	Fusion	ENSG00000239467.7_ENSG00000204334.7	novel	1444	4	NA	NA	18	6576	multi-exon	FALSE	canonical	2	3	junction_1	10.2225241501304	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGATGCTTACCTGGCTACT	170770644	True	NA	NA	False	AATAAA	-39	NA	170770995	170785305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_170771188_170777376_170777426_170777643_170777681_170782240_170782390_170784645
transcript_84451.known	chr2	+	1029	7	FSM	ENSG00000128683.14	ENST00000344257.9	1029	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	2.21735578260835	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGAGGATCCTTCAGGATC	170816793	True	NA	7	True	AATAAA	-18	NA	170816911	170842759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170817049_170818528_170818674_170822086_170822150_170829474_170829634_170830949_170831193_170836792_170836884_170842568
transcript_84458.known	chr2	+	2447	10	FSM	ENSG00000115806.13	ENST00000234160.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	952	junction_9	84.9428275407482	374	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAAGTGCTTCCTCAGTTA	170918673	True	NA	12	True	ATTAAA	-29	NA	170929252	170967130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_170929404_170948349_170948431_170949538_170949743_170950203_170950291_170951327_170951459_170954649_170954783_170956435_170956560_170961662_170961750_170962838_170962947_170965789
transcript_8446.known	chr1	+	4831	6	FSM	ENSG00000134186.12	ENST00000370025.9	4831	6	0	0	0	0	multi-exon	FALSE	canonical	3	246	junction_2	60.3973509352852	668	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCATCAATCTTAAACTTT	108686134	True	NA	46	True	ATTAAA	-20	NA	108692309	108702928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276_108696338_108698603_108698828_108699161
transcript_84470.known	chr2	-	5723	21	FSM	ENSG00000198586.14	ENST00000431350.7	5723	21	0	0	0	0	multi-exon	TRUE	canonical	3	167	junction_18	22.7953394359461	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCATGCTATTAGCTGTGTT	-171160879	False	629	-18	True	ATTAAA	-20	NA	171160893	170990822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171082780_171082853_171117738_171117858_171160289
transcript_84473.known	chr2	-	4321	23	FSM	ENSG00000198586.14	ENST00000359766.7	4321	23	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_10	73.7904252562901	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACATTGGAAGGGAGCTTT	-171160481	False	NA	-54	True	AATAAA	-33	NA	171160495	170992153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_170993957_170996652_170996761_170997711_170997824_171006146_171006283_171006473_171006644_171006799_171006890_171006971_171007064_171011372_171011455_171014850_171014949_171022871_171023130_171028338_171028406_171046173_171046363_171049813_171049951_171050063_171050175_171053760_171053854_171055082_171055173_171056470_171056567_171058150_171058198_171061080_171061157_171081639_171081709_171082780_171082853_171117738_171117858_171160289
transcript_84488.known	chr2	-	9770	10	FSM	ENSG00000123600.21	ENST00000375258.9	9770	10	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_9	32.8986472009765	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	-171432258	True	NA	NA	False	ATTAAA	-20	NA	171433990	171315745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171433882
transcript_84489.known	chr2	-	9791	10	FSM	ENSG00000123600.21	ENST00000612742.5	9791	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_9	35.1297418924776	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTATAGTATAATTATGTT	NA	False	NA	NA	False	ATTAAA	-20	NA	171434802	171315745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171392042_171392198_171434673
transcript_84505.known	chr2	-	2246	9	FSM	ENSG00000123600.21	ENST00000447486.5	2246	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	47.8905001017947	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-171432377	True	NA	NA	False	NA	NA	NA	171434109	171323250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171330558_171330699_171331803_171331868_171337452_171337503_171339183_171339555_171360421_171360514_171414602_171414727_171433882
transcript_84519.known	chr2	-	558	5	FSM	ENSG00000123600.21	ENST00000453846.5	558	5	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_4	31.1558581971353	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTTGAGGGAATTTCC	-171433728	True	NA	NA	False	NA	NA	NA	171434780	171339474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171339555_171360421_171360514_171392042_171392198_171414602_171414727_171434673
transcript_84521.known	chr2	-	697	4	FSM	ENSG00000123600.21	ENST00000463392.5	697	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	50.2858495669176	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAATTAAGTTAGTATTAT	-171326547	True	NA	13	True	NA	NA	NA	171327065	171323900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171324363_171325840_171325907_171326041_171326149_171327003
transcript_84527.known	chr2	-	578	4	FSM	ENSG00000123600.21	ENST00000442778.5	578	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	33.4796787453059	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCATTATGAGAAAAGTTC	-171433728	True	NA	NA	False	NA	NA	NA	171434780	171339330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171339555_171360421_171360514_171392042_171392198_171434673
transcript_84537.known	chr2	+	5853	14	FSM	ENSG00000115827.14	ENST00000375255.8	5853	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_8	19.9428176627918	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTTTGTGAACATGTGTC	171431611	True	NA	26	True	AATAAA	-25	NA	171434225	171485052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171434704_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171458371_171458478_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_84547.known	chr2	+	2429	13	FSM	ENSG00000115827.14	ENST00000468592.5	2429	13	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32.9995791218952	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGGGAGAAAATGTTTCTT	171431602	True	NA	NA	False	AATAAA	-13	NA	171434216	171482158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171434271_171435082_171435187_171443522_171443614_171448680_171448818_171449878_171449958_171453123_171453214_171457970_171458076_171468887_171469031_171473865_171473976_171476859_171476951_171477986_171478071_171480037_171480194_171480973
transcript_84548.nnic	chr2	+	1199	2	Genic_Genomic	ENSG00000233934.2	novel	167	1	NA	NA	-69872	354	multi-exon	FALSE	canonical	0	0	junction_1	0	25358	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCTCTTCATTGAGTAG	NA	False	NA	NA	False	AATAGA	-36	NA	171517220	171587613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_171517755_171586948
transcript_84550.known	chr2	-	447	1	FSM	ENSG00000233762.3	ENST00000433675.1	447	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	26876	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCTCAGCTAATAAAGGCG	-171517696	False	NA	-48	True	NA	NA	NA	171517716	171517269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171517300_171517700
transcript_84552.known	chr2	+	4235	4	FSM	ENSG00000071967.12	ENST00000321348.9	4235	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	3.29983164553722	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCTTTGTGTGTTATCAAT	171521906	True	NA	NA	False	AATAAA	-14	NA	171522473	171558129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171541584_171541794_171553345_171553501_171554523
transcript_84554.known	chr2	+	1493	4	FSM	ENSG00000071967.12	ENST00000409484.5	1493	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	14.0554457615387	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACCTCAGAGAGCACTTTT	171522217	False	NA	NA	False	AATGAA	-39	NA	171522246	171555607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522292_171541584_171541794_171553345_171553501_171554523
transcript_8456.known	chr1	+	2043	5	FSM	ENSG00000134186.12	ENST00000467302.5	2043	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	159.474919658233	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	108686151	True	NA	NA	False	NA	NA	NA	108692326	108697504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108692868_108693589_108693643_108695701_108695771_108696042_108696195_108696276
transcript_84561.known	chr2	+	763	3	FSM	ENSG00000071967.12	ENST00000468308.1	763	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	13.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCGCCATGTTGCCCGGG	171522318	False	NA	NA	False	NA	NA	NA	171522347	171551140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171541584_171541794_171550977
transcript_84562.known	chr2	+	3540	3	FSM	ENSG00000071967.12	ENST00000375252.3	3540	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATGACAAAGAAGGCAATTGC	171521909	True	NA	NA	False	NA	NA	NA	171522476	171557646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171553345_171553501_171554523
transcript_84564.known	chr2	+	549	2	FSM	ENSG00000071967.12	ENST00000494587.1	549	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTGGATAAGTTTGA	171521943	True	NA	NA	False	CATAAA	-23	NA	171522510	171541128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171522739_171540807
transcript_84565.known	chr2	+	4354	18	FSM	ENSG00000077380.16	ENST00000397119.8	4354	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	290.68965841366	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTTGGTATTATTTAAAC	171685610	True	NA	NA	False	AATAAA	-16	NA	171687468	171750158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_84566.known	chr2	+	2552	18	FSM	ENSG00000077380.16	ENST00000409453.5	2552	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	304.414862160996	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCATTTTTACTCCTTAC	171682239	True	NA	14	True	AATAAA	-26	NA	171687775	171748420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171706546_171706565_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_84568.known	chr2	+	2196	17	FSM	ENSG00000077380.16	ENST00000409317.5	2196	17	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_4	219.409968722937	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAATGCAGCAAGGAAACTT	171687638	False	NA	23	True	ATTAAA	-29	NA	171687707	171748011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171712766_171712827_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_84574.known	chr2	+	2494	16	FSM	ENSG00000077380.16	ENST00000508530.5	2494	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_15	183.891707262726	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171685642	False	NA	5	True	AATAAA	-17	NA	171687500	171748411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747778
transcript_84579.known	chr2	+	2572	16	FSM	ENSG00000077380.16	ENST00000409197.5	2572	16	0	0	0	0	multi-exon	FALSE	canonical	3	509	junction_1	62.9538102279935	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	171687602	False	NA	5	True	AATAAA	-17	NA	171687671	171748411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687874_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_8458.nic	chr1	+	2028	4	ISM	ENSG00000134186.12	ENST00000370022.9	1591	5	-35	0	-21	0	intron_retention	TRUE	canonical	3	246	junction_2	66.9527196360735	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCATTTAGACATGGAGAA	108686113	True	NA	NA	False	NA	NA	NA	108692288	108697504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_108692868_108695701_108695771_108696042_108696195_108696276
transcript_84593.known	chr2	+	2589	16	FSM	ENSG00000077380.16	ENST00000340296.8	2589	16	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	103.502656970727	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTCAAATTTTCATTTTT	NA	False	NA	5	True	AATAAA	-17	NA	171687408	171748411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790_171726917_171727820_171727968_171728304_171728419_171728716_171728851_171729708_171729854_171744048_171744190_171745801_171745928_171747775
transcript_84599.known	chr2	+	581	3	FSM	ENSG00000077380.16	ENST00000471482.5	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	321	junction_1	193	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCAAGAGTAATTATTAACAT	171685613	True	NA	NA	False	NA	NA	NA	171687471	171693084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171687628_171690146_171690264_171692776
transcript_84603.nic	chr2	+	340	2	ISM	ENSG00000077380.16	ENST00000471482.5	581	3	-70	2824	-7	-2824	5prime_fragment	FALSE	canonical	3	321	junction_1	0	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	NA	False	NA	48	True	AAGAAA	-12	NA	171687401	171690260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_171687628_171690146
transcript_84604.nic	chr2	+	367	2	ISM	ENSG00000077380.16	ENST00000411953.5	582	6	-134	25090	-51	-2824	5prime_fragment	FALSE	canonical	3	509	junction_1	0	904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAAGTATGTTTGATTTTTTT	171687551	False	NA	48	True	AAGAAA	-12	NA	171687620	171690260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_171687874_171690146
transcript_84607.known	chr2	+	1047	9	FSM	ENSG00000077380.16	ENST00000435234.5	1047	9	0	0	0	0	multi-exon	FALSE	canonical	1	16	junction_1	226.232734147824	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGTATGGTGGTCTTTTAA	171687859	False	NA	NA	False	AATACA	-33	NA	171687880	171726913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171688004_171690146_171690264_171692776_171692895_171707286_171707378_171715327_171715444_171725617_171725714_171725918_171726082_171726193_171726294_171726790
transcript_84608.known	chr2	-	3936	18	FSM	ENSG00000115840.14	ENST00000422440.7	3936	18	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_11	11.9988465420265	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATAGTATTTCATTGTAT	-171892782	True	NA	-8	True	TATAAA	-18	NA	171894244	171783404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_171785476_171787570_171787662_171787788_171787948_171791450_171791590_171793626_171793768_171809605_171809687_171810223_171810277_171813338_171813498_171815120_171815203_171826797_171826883_171833962_171834057_171834726_171834866_171837120_171837268_171844368_171844509_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_84615.nnic	chr2	-	574	5	NNC	ENSG00000115840.14	novel	556	5	NA	NA	-64	4879	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	26.1772802254168	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCTGTTTTTCCCTGAAG	-171894282	False	NA	NA	False	AATAAA	-27	NA	171894308	171850921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_171851077_171855833_171855950_171868680_171868824_171893204_171893259_171894202
transcript_84617.nic	chr2	-	607	4	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-64	21615	-64	155	5prime_fragment	FALSE	canonical	3	49	junction_3	8.52447456836295	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGTGTAGTAATGCTGTTG	-171894282	False	NA	NA	False	ATTAAA	-18	NA	171894308	171855645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_171855950_171868680_171868824_171893204_171893259_171894202
transcript_84618.nic	chr2	-	669	3	ISM	ENSG00000115840.14	ENST00000426896.5	911	9	-64	34284	-64	-12388	5prime_fragment	FALSE	canonical	3	49	junction_2	8.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAATTAAAAAACCCACAAAC	-171894282	False	NA	NA	False	NA	NA	NA	171894308	171868314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_171868824_171893204_171893259_171894202
transcript_84629.known	chr2	+	1634	11	FSM	ENSG00000128708.13	ENST00000264108.5	1634	11	0	0	0	0	multi-exon	FALSE	canonical	3	557	junction_1	101.545260844611	3173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATTCCTTCCACACTTTGC	171911204	True	NA	12	True	AATAAA	-20	NA	171922460	171983686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171922508_171925536_171925642_171946707_171946784_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_84637.known	chr2	+	1567	10	FSM	ENSG00000128708.13	ENST00000412731.5	1567	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	263.039498512634	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTATCATTCCTTCCACACT	171911191	True	NA	8	True	AATAAA	-16	NA	171922447	171983682	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171922508_171925536_171925642_171952880_171953002_171965337_171965518_171965786_171965909_171966408_171966514_171966842_171966950_171976156_171976309_171979246_171979364_171983184
transcript_84644.known	chr2	+	600	2	FSM	ENSG00000128708.13	ENST00000460481.1	600	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCCTCAGGCCGGTCTG	171911205	True	NA	NA	False	AAAACA	-36	NA	171922461	171923475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_171922508_171922921
transcript_84645.known	chr2	+	3049	10	FSM	ENSG00000172878.14	ENST00000315796.5	3049	10	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	4.32049379893857	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGGGTGTATATATAT	171999176	True	NA	12	True	ATTAAA	-15	NA	171999952	172082430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_172000010_172061497_172061656_172063710_172063861_172065603_172065753_172066263_172066307_172070906_172071071_172077796_172077895_172079214_172079263_172080127_172080207_172080327
transcript_8465.nic	chr1	+	847	3	ISM	ENSG00000143107.10	ENST00000370017.9	3090	13	-105	24339	-105	-23646	5prime_fragment	FALSE	canonical	3	11	junction_2	2	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGCATTACTGAAATTGAT	NA	False	NA	4	True	AATAAA	-19	NA	108712802	108718410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_108712997_108713510_108713530_108717776
transcript_84656.known	chr2	+	929	3	FSM	ENSG00000172878.14	ENST00000493035.5	929	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	2.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCGAGACCAGCCTGGCCAA	171999166	True	NA	NA	False	NA	NA	NA	171999942	172064414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_172000010_172061497_172061656_172063710
transcript_8466.nic	chr1	+	934	3	ISM	ENSG00000143107.10	ENST00000370017.9	3090	13	-105	24252	-105	-23559	5prime_fragment	FALSE	canonical	3	11	junction_2	2	25	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTCCCATTGATTTATATT	NA	False	NA	91	True	ATTAAA	-17	NA	108712802	108718497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_108712997_108713510_108713530_108717776
transcript_84664.nnic	chr2	-	835	3	NNC	ENSG00000225205.5	novel	1397	3	NA	NA	483	-215	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	36	81	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTTTACAAATTACTATT	-172554741	False	NA	NA	False	AATAAA	-19	NA	172555924	172503653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_172504143_172512333_172512519_172555763
transcript_84666.known	chr2	+	3859	20	FSM	ENSG00000091436.17	ENST00000375213.8	3859	20	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_18	19.4621587515028	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTGTTCAGCATTCACT	173074751	True	NA	11	True	AATAAA	-21	NA	173075845	173268015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173076003_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173229688_173229734_173232191_173232223_173232319_173232460_173238372_173238436_173239403_173239497_173258698_173258816_173261062_173261138_173263744_173263896_173266049
transcript_84667.known	chr2	+	2312	12	FSM	ENSG00000091436.17	ENST00000539448.5	2312	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	20.3205713461682	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	CAAAAAACAAAAAAAAGAAA	NA	False	NA	NA	False	NA	NA	NA	173075434	173222204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173075671_173090997_173091191_173169804_173169893_173182853_173182956_173187557_173187624_173190894_173190924_173191039_173191178_173198025_173198113_173203795_173203871_173209728_173209836_173217114_173217251_173221149
transcript_84672.known	chr2	+	2778	10	FSM	ENSG00000144354.14	ENST00000306721.8	2778	10	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	206.044463618061	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCCTTTTGACTGAAGT	173341429	True	NA	21	True	AATAAA	-27	NA	173354871	173368997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173359254_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_84676.known	chr2	+	1369	10	FSM	ENSG00000144354.14	ENST00000410101.7	1369	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	254.751779455615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATTTTTTCACTGAAACC	173341429	True	NA	NA	False	NA	NA	NA	173354871	173367720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173359386_173359492_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_84684.known	chr2	+	2500	9	FSM	ENSG00000144354.14	ENST00000347703.7	2500	9	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	83.8330744694479	354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTCTGCTTTTTTAAAAA	173341377	True	NA	15	True	AATAAA	-14	NA	173354819	173368904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173363896_173364794_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_84690.known	chr2	+	2943	8	FSM	ENSG00000144354.14	ENST00000496441.5	2943	8	0	0	0	0	multi-exon	FALSE	canonical	3	539	junction_2	76.4804897089607	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAACTTGATATTAAAAACTA	173341429	True	NA	1	True	AATAAA	-22	NA	173354871	173368500	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173354985_173358711_173358838_173363225_173363463_173363817_173364990_173365451_173365593_173366282_173366433_173367149_173367287_173367633
transcript_847.known	chr1	-	878	2	FSM	ENSG00000188976.11	ENST00000469563.1	878	2	0	0	0	0	multi-exon	FALSE	canonical	3	1652	junction_1	0	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GATACAAAAATTAGCCTGGC	-940507	True	NA	NA	False	AAAAAG	-20	NA	959256	958245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_959082_959214
transcript_84708.nnic	chr2	+	783	4	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.25718035235908	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTTTTTAATTTTAT	NA	False	NA	36	True	AATAAA	-30	NA	173532806	173693684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_173533037_173533205_173533340_173692683_173692755_173693336
transcript_8471.known	chr1	+	2489	19	FSM	ENSG00000116266.11	ENST00000370008.4	2489	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	73.6253445358641	352	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATTCTGGTTTGTGTTTTC	108742256	True	NA	1	True	AATAAA	-17	NA	108746673	108809523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108746787_108752256_108752307_108753062_108753145_108756689_108756767_108758509_108758589_108759984_108760086_108772664_108772820_108776332_108776424_108779285_108779411_108782421_108782518_108782648_108782707_108793581_108793648_108794826_108794908_108796233_108796373_108796619_108796727_108798144_108798238_108800219_108800306_108807400_108807550_108808782
transcript_84710.nnic	chr2	+	727	4	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_3	7.25718035235908	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTAGTGTCCTGTGTTTAT	NA	False	NA	8	True	AATAAA	-2	NA	173532806	173693656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_173533037_173533205_173533340_173692683_173692755_173693364
transcript_84712.nnic	chr2	+	1365	3	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_2	2	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTTTTTAATTTTAT	NA	False	NA	36	True	AATAAA	-30	NA	173532806	173693684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_173533037_173533205_173533340_173692683
transcript_84716.nnic	chr2	+	1539	2	Antisense	novelGene_ENSG00000237016.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATTTTTTAATTTTAT	NA	False	NA	36	True	AATAAA	-30	NA	173532801	173693684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_173533340_173692683
transcript_84722.nnic	chr2	-	523	3	Intergenic	novelGene_29	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCCATGCCTCACGATCC	NA	False	NA	NA	False	AATAAA	-22	NA	173763640	173692080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_173692367_173709109_173709171_173763464
transcript_8473.known	chr1	+	7152	15	FSM	ENSG00000121957.15	ENST00000264126.9	7152	15	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_14	13.7137276672177	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAATGTTGAAGTTGGCA	108874907	True	NA	NA	False	AGTAAA	-23	NA	108876984	108934545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108877229_108885274_108885579_108896863_108897086_108897491_108897628_108897958_108898102_108898641_108898766_108898878_108898995_108901789_108901946_108903125_108903235_108904124_108904255_108914337_108914409_108918612_108918790_108922416_108922577_108923999_108924215_108929700
transcript_84732.nnic	chr2	+	797	4	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278235	0	multi-exon	FALSE	canonical	0	0	junction_2	7.03957069398096	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	173532257	True	NA	6	True	AATAAA	-22	NA	173532840	173811392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533037_173533205_173533340_173761578_173761731_173811077
transcript_84738.nnic	chr2	+	1005	3	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278274	0	multi-exon	FALSE	canonical	0	0	junction_1	3	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	6	True	AATAAA	-22	NA	173532801	173811392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533340_173761578_173761731_173811077
transcript_84740.nnic	chr2	+	645	3	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278235	0	multi-exon	FALSE	canonical	1	4	junction_2	6.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	173532257	True	NA	6	True	AATAAA	-22	NA	173532840	173811392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533037_173533205_173533340_173811077
transcript_84741.nnic	chr2	+	632	3	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278222	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	173532270	True	NA	6	True	AATAAA	-22	NA	173532853	173811392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533037_173705295_173705430_173811077
transcript_84743.nnic	chr2	+	848	2	Genic_Genomic	ENSG00000270460.1	novel	317	1	NA	NA	-278269	0	multi-exon	FALSE	canonical	1	4	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	6	True	AATAAA	-22	NA	173532806	173811392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_173533340_173811077
transcript_84744.known	chr2	+	317	1	FSM	ENSG00000270460.1	ENST00000604994.1	317	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCTCAGATTGATATGAAT	NA	False	NA	6	True	AATAAA	-22	NA	173811075	173811392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_173811100_173811400
transcript_84745.known	chr2	-	358	2	FSM	ENSG00000273258.1	ENST00000609273.1	358	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTATCTAGTCTTACCTG	-174012954	False	NA	NA	False	ATTAAA	-18	NA	174012975	174011855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174012117_174012878
transcript_84751.known	chr2	-	1656	10	FSM	ENSG00000138430.16	ENST00000344357.9	1656	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_9	203.367453117883	2313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-174238981	True	NA	-4	True	AATAAA	-16	NA	174248599	174075007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174248451
transcript_84758.known	chr2	-	711	7	FSM	ENSG00000138430.16	ENST00000392560.6	711	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	265.95404782698	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATAAACATACAACTTCCAA	-174124277	True	NA	NA	False	AATAAA	-17	NA	174124315	174075408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174123179_174123278_174123594_174123676_174124263
transcript_84767.nnic	chr2	-	1037	5	NNC	ENSG00000138430.16	novel	1656	10	NA	NA	5532	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_4	307.906235727697	479	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCCTTGGTGTGTTTGGGGA	-174117851	True	NA	-4	True	AATAAA	-16	NA	174118138	174075007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_174075528_174078967_174079091_174081151_174081249_174081923_174082065_174117982
transcript_8477.nnic	chr1	-	2124	12	NIC	ENSG00000121940.17	novel	6824	13	NA	NA	0	0	intron_retention	TRUE	canonical	3	17	junction_1	47.9583152331272	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTCTGCCGATTTTTTCCC	-108961195	True	NA	-5	True	AATAAA	-15	NA	108963504	108929936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_108930205_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963360
transcript_84772.known	chr2	-	1270	8	FSM	ENSG00000138430.16	ENST00000428402.6	1270	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	250.296069583563	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTTGGTGTGTTTGGG	-174238857	True	NA	-6	True	AATAAA	-14	NA	174248475	174075009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174075528_174123179_174123278_174123594_174123676_174141824_174142001_174223032_174223161_174229307_174229452_174246714_174246816_174248451
transcript_84775.known	chr2	-	1918	10	FSM	ENSG00000138433.16	ENST00000342016.8	1918	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	66.8831669756401	517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCCCTTTAGGTGTTTTGT	-174393477	True	NA	NA	False	AATAAA	-17	NA	174395712	174348021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174349173_174350659_174350746_174351618_174351726_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_84784.nic	chr2	-	959	8	NIC	ENSG00000138433.16	novel	804	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_5	75.710781590072	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAATAAGGACAGTTTCATAT	-174393498	True	NA	NA	False	AATAAA	-24	NA	174395733	174358172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_174358537_174378922_174379041_174380201_174380251_174380650_174380716_174380803_174380815_174381703_174381778_174387684_174387780_174395550
transcript_84786.nic	chr2	-	352	3	ISM	ENSG00000138433.16	ENST00000461454.1	804	7	-27	3017	-21	-3017	5prime_fragment	FALSE	canonical	3	153	junction_2	1	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTTATCTTCTTCCGTTT	-174393498	True	NA	-1	True	AAAAAG	-1	NA	174395733	174381703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_174381778_174387684_174387780_174395550
transcript_84787.known	chr2	+	3052	8	FSM	ENSG00000144306.15	ENST00000272732.11	3052	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	19.2162771140106	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGCACCAGAATGGTACATT	174395537	True	NA	NA	False	NA	NA	NA	174395729	174429575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174395818_174398274_174398443_174399921_174400104_174400989_174401190_174404102_174404316_174422884_174423048_174424474_174424650_174427712
transcript_8479.known	chr1	-	1937	12	FSM	ENSG00000121940.17	ENST00000674849.1	1937	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	58.5249823043032	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTAGCCAATATGTCATTAA	-108961116	True	NA	-57	True	NA	NA	NA	108963425	108932336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108932502_108934619_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950439_108963360
transcript_84792.known	chr2	+	943	4	FSM	ENSG00000144306.15	ENST00000549848.5	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	8.04155872120988	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATCATATGGTCAGCTAAT	174409714	True	NA	NA	False	NA	NA	NA	174410081	174427895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174410504_174422884_174423048_174424474_174424650_174427712
transcript_84793.known	chr2	+	1674	4	FSM	ENSG00000144306.15	ENST00000548921.5	1674	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.2532930181083	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATAAACAAAAGAAAAATCCA	174409669	True	NA	NA	False	CATAAA	-31	NA	174410036	174428859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174410226_174422884_174423048_174424474_174424650_174427712
transcript_84796.known	chr2	+	658	3	FSM	ENSG00000144306.15	ENST00000475928.1	658	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	23.5	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACTATTAAACTACGTATA	174410323	False	NA	NA	False	NA	NA	NA	174410343	174428035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174410504_174424474_174424650_174427712
transcript_8480.known	chr1	-	1896	12	FSM	ENSG00000121940.17	ENST00000675956.1	1896	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	49.230945048955	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTATTGACTAGCCAATAT	-108961118	True	NA	-65	True	NA	NA	NA	108963427	108932344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_108932502_108934624_108934943_108937076_108937419_108939635_108939783_108940044_108940143_108941404_108941499_108943474_108943616_108943835_108944058_108947610_108947719_108949819_108949922_108950308_108950449_108963400
transcript_84801.nnic	chr2	+	1021	2	NIC	ENSG00000144306.15	novel	658	3	NA	NA	-21	-72	combination_of_known_splicesites	FALSE	canonical	3	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTAGTACCCTCAAATC	174409648	True	NA	NA	False	ATTAAA	-29	NA	174410015	174428245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_174410504_174427712
transcript_84802.known	chr2	+	393	2	FSM	ENSG00000226853.4	ENST00000417038.1	393	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGTGTCCCAGTGTATTA	174487362	True	NA	NA	False	ATTAAA	-19	NA	174487402	174488300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174487530_174488034
transcript_84804.known	chr2	-	1772	5	FSM	ENSG00000115935.18	ENST00000409415.7	1772	5	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	3.49106001094224	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTGCTCTTTGTAATCT	-174682471	True	NA	NA	False	ATTAAA	-20	NA	174682871	174571168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174572447_174575203_174575381_174581309_174581440_174585522_174585612_174682773
transcript_84805.known	chr2	-	553	3	FSM	ENSG00000115935.18	ENST00000487291.1	553	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-174682516	True	NA	NA	False	NA	NA	NA	174682916	174676336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174676667_174677044_174677125_174682773
transcript_84808.nnic	chr2	+	985	2	Genic_Genomic	ENSG00000235655.3	novel	411	1	NA	NA	-108	540	multi-exon	FALSE	canonical	0	0	junction_1	0	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGTATAAATATATGCA	174719777	True	NA	NA	False	ATTAAA	-34	NA	174719799	174720858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_174720041_174720114
transcript_84809.known	chr2	+	411	1	FSM	ENSG00000235655.3	ENST00000369387.4	411	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	941	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATCCACTATGATGGGAAA	174719885	False	NA	NA	False	NA	NA	NA	174719907	174720318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_174719900_174720300
transcript_84810.known	chr2	-	3156	13	FSM	ENSG00000128656.15	ENST00000409900.9	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_7	32.6890866940159	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTGAAGATTATTCCAAAA	-175003792	True	NA	NA	False	AATAAA	-16	NA	175005381	174798808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174877839_174878129_174915057_174915172_174918533_174918566_174944887_174944944_174952163_174952203_175004893
transcript_84812.known	chr2	-	807	9	FSM	ENSG00000128656.15	ENST00000409089.7	807	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	81.9527302778864	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGAATGCAGAGAACCTTGG	-174847128	False	NA	NA	False	NA	NA	NA	174847381	174800259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174821728_174821780_174824433_174824519_174846879_174846958_174847312
transcript_84815.known	chr2	-	1719	8	FSM	ENSG00000128656.15	ENST00000650731.1	1719	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	60.8661965096475	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAAGTGTACAACACAGC	-174847343	True	NA	-29	True	AATAAA	-16	NA	174847596	174799511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879_174846958_174847312
transcript_84817.known	chr2	-	2232	7	FSM	ENSG00000128656.15	ENST00000295497.12	2232	7	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_6	16.7969904711793	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTTTTGTTTACTGTTAA	-174847302	True	NA	44	True	ATTAAA	-20	NA	174847555	174799312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_174800288_174801706_174801813_174808904_174809043_174811510_174811589_174812308_174812483_174824433_174824519_174846879
transcript_84822.known	chr2	-	1989	15	FSM	ENSG00000115966.18	ENST00000428760.5	1989	15	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	57.7499889566205	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGTTGGTGTAGCAGCAGT	-175163948	True	NA	NA	False	ATTAAA	-10	NA	175168169	175074473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175092542_175092617_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84824.known	chr2	-	4164	14	FSM	ENSG00000115966.18	ENST00000264110.7	4164	14	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_9	30.8374244313972	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCATAATTTGCTTGTTC	-175163982	True	NA	-9	True	AATAAA	-17	NA	175168203	175072258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84827.known	chr2	-	4079	13	FSM	ENSG00000115966.18	ENST00000345739.9	4079	13	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_9	29.8369411226345	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTTGTTCTCTTACCTT	-175163985	True	NA	0	True	AATAAA	-26	NA	175168206	175072249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175074836_175080659_175080766_175093060_175093268_175097443_175097594_175111567_175111655_175113993_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84839.nic	chr2	-	1810	9	ISM	ENSG00000115966.18	ENST00000428760.5	1989	15	-83	38796	-46	724	5prime_fragment	FALSE	canonical	3	96	junction_4	32.3976754567361	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTTTAATGAACATT	-175164031	True	NA	NA	False	NA	NA	NA	175168252	175113269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84841.nic	chr2	-	1713	8	ISM	ENSG00000115966.18	ENST00000456655.5	1861	14	-83	38765	-46	724	5prime_fragment	FALSE	canonical	3	86	junction_4	32.3936249712117	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATAGTTTAATGAACATT	-175164031	True	NA	NA	False	NA	NA	NA	175168252	175113269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175114109_175114689_175114869_175117989_175118119_175118250_175118370_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84843.known	chr2	-	1335	8	FSM	ENSG00000115966.18	ENST00000409833.5	1335	8	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_3	34.3005920101228	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTATTTGCTTTGCTGTGGT	-175163948	True	NA	NA	False	ATTAAA	-15	NA	175168169	175114242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175114869_175117989_175118119_175118250_175118370_175121443_175121541_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84847.known	chr2	-	681	6	FSM	ENSG00000115966.18	ENST00000413123.5	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	87.8648962897015	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGACTAGTTTTGACATGT	-175163923	True	NA	NA	False	NA	NA	NA	175168144	175126792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175127059_175127155_175127232_175130137_175130208_175136411_175136487_175151059_175151159_175168049
transcript_84850.nic	chr2	-	769	3	ISM	ENSG00000115966.18	ENST00000413123.5	681	6	-108	9227	-46	-9027	5prime_fragment	FALSE	canonical	3	174	junction_2	1	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAACAAAGAAAGAAAGAAA	-175164031	True	NA	NA	False	ATTAAA	-34	NA	175168252	175136019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175136487_175151059_175151159_175168049
transcript_84851.known	chr2	+	497	2	FSM	ENSG00000229750.1	ENST00000449168.1	497	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGAGGGCGCGGGTGCAGG	NA	False	NA	NA	False	NA	NA	NA	175167903	175168522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_175167936_175168057
transcript_8486.nnic	chr1	+	1097	2	Genic_Genomic	ENSG00000228665.2_ENSG00000244716.3	novel	555	1	NA	NA	-29	66	multi-exon	FALSE	canonical	0	0	junction_1	0	34705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	TAAAATAAAATAAAATAAAA	NA	False	NA	NA	False	AATAAA	-4	NA	108992252	109030385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_108992878_109029913
transcript_84861.known	chr2	-	842	4	FSM	ENSG00000154518.10	ENST00000392541.3	842	4	0	0	0	0	multi-exon	FALSE	canonical	3	3437	junction_1	130.410463111243	9823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTCTTCTGTGATTTGTAC	-175152007	True	NA	-13	True	ATTAAA	-14	NA	175181663	175178144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175178403_175179056_175179251_175180097_175180179_175181354
transcript_84862.known	chr2	-	1313	4	FSM	ENSG00000154518.10	ENST00000497075.5	1313	4	0	0	0	0	multi-exon	FALSE	canonical	3	2757	junction_3	450.582585844889	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTTATTTCCAAAGTCATT	-175152054	True	NA	-54	True	NA	NA	NA	175181710	175178185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175179251_175180097_175180179_175181354_175181467_175181655
transcript_84863.known	chr2	-	7542	13	FSM	ENSG00000144320.14	ENST00000272748.9	7542	13	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_2	7.81158327954924	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTTTATCACTCCATA	-176000463	True	NA	-24	True	AATAAA	-26	NA	176002267	175923881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175930200_175937343_175937515_175938312_175938384_175939551_175939658_175947479_175947693_175964371_175964424_175964505_175964590_175970763_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995557_175995647_176002159
transcript_8487.nnic	chr1	-	1060	2	Antisense	novelGene_ENSG00000228665.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	34760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTACTTTTTTCTACCATCA	NA	False	NA	NA	False	NA	NA	NA	109030384	108992252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_108992911_109029982
transcript_84878.known	chr2	-	528	6	FSM	ENSG00000144320.14	ENST00000392540.6	528	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	25.5702952661873	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGTTAACTTTTATTTAA	-176000459	True	NA	NA	False	TTTAAA	-20	NA	176002263	175970763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_175970805_175979809_175979869_175992230_175992419_175993181_175993224_175995552_175995647_176002159
transcript_8488.known	chr1	+	555	1	FSM	ENSG00000244716.3	ENST00000414070.1	555	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15480	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTCAGCATTAAAATAAATG	NA	False	NA	NA	False	AAGAAA	-34	NA	108992281	108992836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_108992300_108992800
transcript_84880.nic	chr2	-	558	4	ISM	ENSG00000144320.14	ENST00000544803.5	7647	14	4	68226	4	108	5prime_fragment	FALSE	canonical	3	65	junction_3	4.18993502999218	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAGTTTGAATTTCTTTCA	-176000486	True	NA	NA	False	ATTAAA	-14	NA	176002290	175992122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175992419_175993181_175993224_175995557_175995647_176002159
transcript_84882.nic	chr2	-	851	2	ISM	ENSG00000144320.14	ENST00000483230.5	252	3	-11	2696	4	-1746	5prime_fragment	FALSE	canonical	3	65	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAAATTCTATAC	-176000486	True	NA	NA	False	NA	NA	NA	176002290	175994926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_175995647_176002159
transcript_84883.nnic	chr2	+	474	2	Antisense	novelGene_ENSG00000218175.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9152	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGGTTTCTTCTACATAGTA	NA	False	NA	NA	False	NA	NA	NA	176200859	176201383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_176201220_176201269
transcript_84885.known	chr2	-	345	1	FSM	ENSG00000218175.2	ENST00000405359.2	345	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2005	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTTTATAACGTGTTC	NA	False	NA	-50	True	NA	NA	NA	176201252	176200907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_176200900_176201300
transcript_84890.known	chr2	+	1592	11	FSM	ENSG00000128654.14	ENST00000420864.5	1592	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	258.032943633173	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	NA	False	NA	12	True	AATAAA	-21	NA	176269394	176338025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176269670_176270215_176270420_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_8490.nnic	chr1	+	1673	3	Genic_Genomic	ENSG00000228054.2_ENSG00000244716.3	novel	655	1	NA	NA	-29	910	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGGAAGGAAGGAAGGAAG	NA	False	NA	NA	False	AATATA	-21	NA	108992252	109048392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr1_+_108992878_109046704_109047662_109048301
transcript_84901.known	chr2	+	799	7	FSM	ENSG00000128654.14	ENST00000443241.5	799	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	259.945346819929	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGTCTTAACTTTTGA	176261760	True	NA	NA	False	NA	NA	NA	176269469	176337679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176269670_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_84903.known	chr2	+	1341	10	FSM	ENSG00000128654.14	ENST00000249442.11	1341	10	0	0	0	0	multi-exon	FALSE	canonical	3	627	junction_2	36.6757564490647	1878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTTGTGTTACATACTC	176261732	True	NA	12	True	AATAAA	-21	NA	176269441	176338025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_176269670_176296859_176296908_176297848_176297896_176323391_176323465_176326824_176326902_176328292_176328386_176328873_176328913_176329300_176329427_176330583_176330661_176337492
transcript_84909.known	chr2	+	2067	11	FSM	ENSG00000170144.21	ENST00000392524.6	2067	11	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	491.754857627253	1793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177212511	True	NA	-18	True	GATAAA	-36	NA	177212562	177220085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_84910.known	chr2	+	3111	11	FSM	ENSG00000170144.21	ENST00000678111.1	3111	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1045.04727644255	440	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142946	True	NA	-10	True	AATAAA	-1	NA	177212723	177223942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_84916.known	chr2	+	5688	11	FSM	ENSG00000170144.21	ENST00000411529.6	5688	11	0	0	0	0	multi-exon	FALSE	canonical	3	610	junction_1	934.375304682225	1566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGCCTTTATCAGTTAT	177142971	True	NA	6	True	AATAAA	-17	NA	177212748	177223958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_84917.known	chr2	+	3028	11	FSM	ENSG00000170144.21	ENST00000676874.1	3028	11	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_10	1259.97038060424	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACAACAGGAAACTTGGAGTG	177142963	True	NA	-10	True	AATAAA	-1	NA	177212740	177223942	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212806_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177222059
transcript_84921.known	chr2	+	1911	11	FSM	ENSG00000170144.21	ENST00000679328.1	1911	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	1074.22951458243	963	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAGCATTAAGATTACCTT	177212707	True	NA	-18	True	GATAAA	-36	NA	177213265	177220085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177213419_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246_177219315_177219407
transcript_84926.known	chr2	+	1731	10	FSM	ENSG00000170144.21	ENST00000435711.5	1731	10	0	0	0	0	multi-exon	FALSE	canonical	3	2351	junction_1	462.598965054112	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAAAGAAGATCATTGTTAAT	177142994	True	NA	NA	False	NA	NA	NA	177212771	177219865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177217704_177217846_177219036_177219160_177219246
transcript_84927.known	chr2	+	5600	10	FSM	ENSG00000170144.21	ENST00000676681.1	5600	10	0	0	0	0	multi-exon	FALSE	canonical	3	306	junction_7	1070.8133749401	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTTACCAGTAAGTAATA	177142946	True	NA	-32	True	NA	NA	NA	177212723	177223920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177219407
transcript_8494.nnic	chr1	-	1402	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.779030568655	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061693	True	NA	-4	True	AATAAA	-32	NA	109076023	109062485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063053_109064138_109064694_109066134_109066233_109074986_109075066_109075920
transcript_8496.nnic	chr1	-	1190	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061693	True	NA	-4	True	AATAAA	-32	NA	109076023	109062485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063058_109064355_109064694_109066134_109066233_109074986_109075066_109075920
transcript_85002.known	chr2	+	2926	10	FSM	ENSG00000170144.21	ENST00000677043.1	2926	10	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_9	1315.17003547915	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACTATAGGTGAATATTTTGA	177142946	True	NA	44	True	NA	NA	NA	177212723	177223898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177212872_177215538_177215662_177215749_177215897_177215977_177216189_177216502_177216593_177216675_177216772_177216859_177216941_177219036_177219160_177219246_177219315_177222059
transcript_85006.known	chr2	-	2651	5	FSM	ENSG00000116044.16	ENST00000397063.8	2651	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	97.3049330712477	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTGGGATTCCTTTGA	-177263778	False	NA	-2	True	AATAAA	-24	NA	177263800	177230304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177263402
transcript_85007.known	chr2	-	2446	5	FSM	ENSG00000116044.16	ENST00000397062.8	2446	5	0	0	0	0	multi-exon	FALSE	canonical	3	207	junction_1	21.2529409729571	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTGTTTGGGATTCCTT	-177261780	True	NA	-5	True	AATAAA	-21	NA	177264727	177230307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_177232009_177232391_177232584_177233249_177233340_177234004_177234272_177264531
transcript_8501.nnic	chr1	-	1837	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.779030568655	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061693	True	NA	-4	True	AATAAA	-32	NA	109076023	109062485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063488_109064138_109064694_109066134_109066233_109074986_109075066_109075920
transcript_85014.known	chr2	+	7633	20	FSM	ENSG00000018510.18	ENST00000264167.11	7633	20	0	0	0	0	multi-exon	TRUE	canonical	3	308	junction_12	46.0883771048095	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCATTGTTATAGAAATTGT	177386198	True	NA	12	True	AATAAA	-16	NA	177392772	177543834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_177393050_177420268_177420359_177434326_177434418_177436763_177436885_177436979_177437055_177440964_177441037_177442406_177442487_177445545_177445627_177461892_177462019_177468415_177468525_177482058_177482187_177493147_177493200_177497688_177497766_177499617_177499731_177505505_177505576_177507969_177508032_177513818_177513909_177521268_177521369_177523747_177523806_177538073
transcript_85016.known	chr2	+	1992	9	FSM	ENSG00000155636.15	ENST00000424000.6	1992	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	13.6930639376292	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATGACTTATTTATGTGAA	178111306	True	NA	NA	False	AATAAA	-21	NA	178112423	178129656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121179_178121360_178123521_178123913_178124126_178124291_178125983_178126185_178129396
transcript_85017.known	chr2	+	1788	10	FSM	ENSG00000155636.15	ENST00000616198.4	1788	10	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	35.6644166822332	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATCATGACTTATTTATGT	178111337	True	NA	NA	False	AATAAA	-18	NA	178112454	178129653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178112847_178116261_178116385_178118054_178118182_178120286_178120410_178121173_178121360_178123521_178123652_178123827_178123913_178124126_178124291_178125983_178126185_178129396
transcript_8502.nnic	chr1	-	1625	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	-11	10	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	10.779030568655	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061693	True	NA	-4	True	AATAAA	-32	NA	109076023	109062485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063493_109064355_109064694_109066134_109066233_109074986_109075066_109075920
transcript_85021.known	chr2	-	1738	8	FSM	ENSG00000180228.14	ENST00000678775.1	1738	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	366.979841519439	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444687	True	NA	-22	True	AATAAA	-12	NA	178451175	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450965
transcript_85023.known	chr2	-	1211	8	FSM	ENSG00000180228.14	ENST00000487082.5	1211	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	274.211969253045	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATTTAATTATCTCCTCATA	-178450754	False	NA	NA	False	NA	NA	NA	178450764	178431965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241_178450412_178450561
transcript_85031.known	chr2	+	1268	7	FSM	ENSG00000204311.15	ENST00000645817.1	1268	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.81028989655394	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACACCGTGTTGGTGTTTTA	178451352	True	NA	NA	False	AATAAA	-13	NA	178451430	178461287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178451770_178453552_178453621_178454331_178454528_178456009_178456152_178458509_178458628_178460347_178460447_178460981
transcript_85033.known	chr2	-	1793	7	FSM	ENSG00000180228.14	ENST00000676505.1	1793	7	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_5	332.699898139783	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178450730	False	6488	-22	True	AATAAA	-12	NA	178450740	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365
transcript_85034.known	chr2	-	1610	7	FSM	ENSG00000180228.14	ENST00000677689.1	1610	7	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	338.397202510107	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450965
transcript_85036.known	chr2	-	1546	7	FSM	ENSG00000180228.14	ENST00000678845.1	1546	7	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_6	267.134173528335	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444654	True	NA	-22	True	AATAAA	-12	NA	178451142	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450965
transcript_85044.known	chr2	-	1455	6	FSM	ENSG00000180228.14	ENST00000677981.1	1455	6	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_5	312.000256410151	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444645	True	NA	-22	True	AATAAA	-12	NA	178451133	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178450965
transcript_85064.known	chr2	+	563	4	FSM	ENSG00000223960.8	ENST00000691078.1	1139	4	0	576	0	-112	multi-exon	FALSE	canonical	1	2	junction_2	9.46337971105226	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTTTCCATTTCATTAATGA	178413204	True	NA	NA	False	NA	NA	NA	178413944	178433515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426506_178430769_178430890_178433381
transcript_85066.known	chr2	+	1308	4	FSM	ENSG00000223960.8	ENST00000659708.2	1325	4	17	0	3	0	multi-exon	FALSE	canonical	0	0	junction_2	10.3387082795139	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCCACCTTTTCTTTTTT	178413201	True	NA	NA	False	AATAAA	-26	NA	178413941	178434101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426662_178430769_178430890_178433381
transcript_85069.known	chr2	+	2776	4	FSM	ENSG00000223960.8	ENST00000663803.1	2776	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	9.89949493661167	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATCTTGGGGAAAAAAAAAA	178413613	True	NA	NA	False	NA	NA	NA	178413676	178435210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178426365_178426681_178430694_178430890_178433381
transcript_8508.known	chr1	-	814	4	FSM	ENSG00000197780.11	ENST00000338366.6	814	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	6.12825877028341	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGGCAGGCTGGAGTGCA	-109061673	True	NA	NA	False	NA	NA	NA	109076003	109064139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109064694_109066134_109066233_109074986_109075066_109075920
transcript_85084.known	chr2	+	1049	3	FSM	ENSG00000223960.8	ENST00000436616.4	1365	3	316	0	1	0	multi-exon	FALSE	canonical	2	4	junction_1	10.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTCTCTCATCAGCCACCT	178413229	True	NA	NA	False	AATAAA	-16	NA	178413969	178434091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178430694_178430890_178433381
transcript_85086.known	chr2	+	1057	3	FSM	ENSG00000223960.8	ENST00000661271.1	1057	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	12	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AACTGTAGACAGTAATAAAT	178413837	False	NA	NA	False	NA	NA	NA	178413852	178434057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178414114_178430769_178430890_178433381
transcript_85088.known	chr2	-	1780	8	FSM	ENSG00000180228.14	ENST00000676922.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	267.623326520614	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444669	True	NA	-22	True	AATAAA	-12	NA	178451157	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450241_178450412_178450965
transcript_85089.known	chr2	-	1885	9	FSM	ENSG00000180228.14	ENST00000677584.1	1885	9	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	339.657525126413	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444664	True	NA	-22	True	AATAAA	-12	NA	178451152	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447455_178447587_178450241_178450412_178450965
transcript_85090.known	chr2	-	1645	8	FSM	ENSG00000180228.14	ENST00000678053.1	1645	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_5	320.45853627168	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444658	True	NA	-22	True	AATAAA	-12	NA	178451146	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447455_178447587_178450365_178450412_178450965
transcript_85091.known	chr2	-	1713	9	FSM	ENSG00000180228.14	ENST00000676832.1	1713	9	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	353.157454260844	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178444665	True	NA	-22	True	AATAAA	-12	NA	178451153	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450365_178450412_178450965
transcript_85092.known	chr2	-	1344	7	FSM	ENSG00000180228.14	ENST00000432031.6	1344	7	0	0	0	0	multi-exon	FALSE	canonical	3	655	junction_2	77.486916458343	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAACACTCCAGATTTAATTA	-178450747	False	NA	NA	False	NA	NA	NA	178450757	178431975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178447504_178447587_178450241
transcript_85093.known	chr2	-	1717	8	FSM	ENSG00000180228.14	ENST00000677253.1	1717	8	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	404.702258910606	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGCCTAAGTAAAATTTACA	-178444645	True	NA	-27	True	AATAAA	-7	NA	178451133	178431439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241_178450412_178450965
transcript_85094.known	chr2	-	1999	8	FSM	ENSG00000180228.14	ENST00000677206.1	1999	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	349.189440427574	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAAGTAAAATTTACAAACAT	-178450751	False	NA	-22	True	AATAAA	-12	NA	178450761	178431434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178432255_178436144_178436320_178441609_178441705_178443266_178443385_178444421_178444501_178445425_178445536_178447504_178447587_178450241
transcript_85095.known	chr2	-	585	3	FSM	ENSG00000180228.14	ENST00000466165.1	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	787	junction_2	33.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATTAAATGAAGGTGCT	-178444625	True	NA	NA	False	ATTAAA	-31	NA	178451113	178447319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178447587_178450241_178450412_178450965
transcript_85098.known	chr2	-	1030	5	FSM	ENSG00000079150.19	ENST00000233092.10	1030	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	27.141987768032	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCAGGAATGGTATGACT	-178477799	True	NA	0	True	AATAAA	-25	NA	178478575	178465598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178477061_178477214_178478278
transcript_851.known	chr1	+	657	3	FSM	ENSG00000187608.10	ENST00000624652.1	657	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGCCTGCGGGGAGGCGGCA	1001128	False	NA	-99	True	NA	NA	NA	1001144	1014435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1001264_1008193_1008280_1013983
transcript_8510.known	chr1	-	1076	5	NNC	ENSG00000197780.11	novel	622	5	NA	NA	32	10	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.779030568655	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGACTGATTTGTGACTTT	-109061641	True	NA	-4	True	AATAAA	-32	NA	109075971	109062485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_109063073_109064432_109064694_109066134_109066233_109074986_109075066_109075920
transcript_85101.known	chr2	-	764	4	FSM	ENSG00000079150.19	ENST00000435079.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	29.7097066068763	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTATTTTTCCCCTA	-178477777	True	NA	-92	True	TATAAA	-25	NA	178478553	178465690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469786_178473028_178473143_178478278
transcript_85102.known	chr2	-	666	4	FSM	ENSG00000079150.19	ENST00000434643.6	666	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	22.2311093340441	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTGTATTTCTACTTT	-178478488	False	NA	NA	False	AATACA	-27	NA	178478499	178465769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469783_178477061_178477214_178478278
transcript_85103.known	chr2	-	638	3	FSM	ENSG00000079150.19	ENST00000419184.1	638	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	30	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAGCTATTTACTGTACTT	-178477819	True	NA	NA	False	NA	NA	NA	178478595	178465744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178469651_178469786_178478278
transcript_85104.known	chr2	-	1103	3	FSM	ENSG00000079150.19	ENST00000464248.1	1103	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	22.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAAGATAGTTGTATATCTC	-178477777	True	NA	NA	False	TATAAA	-40	NA	178478553	178465255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178477061_178477214_178478278
transcript_85106.known	chr2	-	555	2	FSM	ENSG00000079150.19	ENST00000685403.1	2545	2	-24	2014	0	-8	multi-exon	FALSE	canonical	1	1	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTTGTATTTGCTATTT	-178477824	True	NA	-100	True	TATAAA	-17	NA	178478600	178465698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_178465932_178478278
transcript_85109.known	chr2	+	3002	5	FSM	ENSG00000237298.10	ENST00000657210.1	3002	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	5.43139024560011	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	178522483	True	NA	NA	False	NA	NA	NA	178523166	178540779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178531313_178531579_178535731_178535829_178537603_178537692_178538697
transcript_8511.known	chr1	+	2769	3	FSM	ENSG00000215717.7	ENST00000338272.9	2769	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_2	16	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTTTGTCAATTTATTTGT	109089510	True	NA	16	True	AATAAA	-17	NA	109090763	109096934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109090883_109092889_109093022_109094416
transcript_85111.known	chr2	+	651	5	FSM	ENSG00000237298.10	ENST00000585487.6	651	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	7.75806032459145	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTGCTTCTTTAATTTAA	178522499	True	NA	NA	False	AATAAA	-13	NA	178523182	178538903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523258_178523451_178523637_178535731_178535829_178537603_178537692_178538697
transcript_85113.known	chr2	+	2691	4	FSM	ENSG00000237298.10	ENST00000664161.1	2691	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	2.82842712474619	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGAGACTCTGTCTCAAAA	178522529	True	NA	NA	False	NA	NA	NA	178523212	178540779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178535731_178535829_178537603_178537692_178538697
transcript_85121.nic	chr2	+	616	2	ISM	ENSG00000237298.10	ENST00000664161.1	2691	4	-52	4908	-6	-1206	5prime_fragment	FALSE	canonical	3	19	junction_1	0	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAATATAATTTAGCAACA	178522477	True	NA	NA	False	NA	NA	NA	178523160	178535871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_178523637_178535731
transcript_85122.known	chr2	+	587	2	FSM	ENSG00000237298.10	ENST00000592161.1	587	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTTTCTACTGAATTGT	178522532	True	NA	NA	False	AATAAA	-3	NA	178523215	178527361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178527195
transcript_85123.known	chr2	+	861	2	FSM	ENSG00000237298.10	ENST00000442329.7	861	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTACCCTGTGCGAGCG	178522529	True	NA	NA	False	AATAAA	-17	NA	178523212	178531750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_178523637_178531313
transcript_85129.nnic	chr2	-	610	2	NNC	ENSG00000163492.16	novel	2029	12	NA	NA	-1555	-133840	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AGAAAAGAAAGAAAAATAAA	-179050574	True	NA	NA	False	TTTAAA	-14	NA	179051692	179049590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_179050067_179051558
transcript_85130.known	chr2	-	10671	18	FSM	ENSG00000187231.14	ENST00000428443.8	10671	18	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_11	10.0131401557427	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTGACATTCCTGTCTTT	-179262859	True	NA	NA	False	AATAAA	-33	NA	179264832	179101677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179110029_179112723_179112846_179115064_179115257_179116667_179116791_179117531_179117614_179121769_179121930_179123714_179123830_179124363_179124559_179132303_179132427_179143591_179143804_179146401_179146458_179149296_179149395_179151277_179151392_179172119_179172234_179176447_179176539_179183079_179183189_179191786_179191867_179264498
transcript_85133.known	chr2	-	2392	20	FSM	ENSG00000163510.14	ENST00000404136.2	2392	20	0	0	0	0	multi-exon	FALSE	canonical	2	211	junction_15	28.2344753017985	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAGAAGACAAGAACACGG	-180000468	True	NA	-73	True	GATAAA	-40	NA	180007113	179945620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180007069
transcript_85134.known	chr2	-	3524	20	FSM	ENSG00000163510.14	ENST00000410053.8	3524	20	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_19	69.5967808979506	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTCAGTGATGTTTTTT	-180007284	False	NA	-9	True	AATAAA	-16	NA	180007297	179944875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_179945716_179950511_179950733_179950824_179950927_179952470_179952599_179954204_179954358_179954956_179955035_179959021_179959083_179964546_179964629_179965877_179965983_179970500_179970564_179970649_179970857_179970940_179971077_179973192_179973247_179973633_179973803_179978189_179978319_179981751_179981998_179986694_179986806_179988576_179988645_179993314_179993455_180006866
transcript_85136.known	chr2	+	1555	6	FSM	ENSG00000170035.16	ENST00000410062.9	1555	6	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	81.4803043686019	1755	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTTCCTGTCGTAATATT	180979270	True	NA	15	True	AATAAA	-17	NA	180980604	181063425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_8514.known	chr1	+	964	2	FSM	ENSG00000215717.7	ENST00000473828.1	964	2	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAGGACAAAATATAAAC	109089552	True	NA	NA	False	NA	NA	NA	109090805	109093776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109090883_109092889
transcript_85148.known	chr2	+	1556	6	FSM	ENSG00000170035.16	ENST00000602710.5	1556	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	303.176252368156	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTAAGTCAGTCTTGTT	180980994	True	NA	31	True	AATAAA	-33	NA	180981123	181063441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180981478_180982017_180982237_180984042_180984094_181057692_181057826_181060664_181060813_181062790
transcript_8515.nnic	chr1	+	535	2	NIC	ENSG00000215717.7	novel	2769	3	NA	NA	-31	-188	combination_of_known_splicesites	FALSE	canonical	3	7	junction_1	0	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCATCCTGTTTTGTTC	109089479	True	NA	NA	False	CATAAA	-3	NA	109090732	109094801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_109090883_109094416
transcript_85154.known	chr2	+	602	4	FSM	ENSG00000170035.16	ENST00000602475.5	602	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	313.548507677308	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGGTAAGTATATTTGGGC	180979472	False	NA	NA	False	AATAGA	-32	NA	180980806	180990046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180980974_180982017_180982237_180984042_180984094_180989881
transcript_85155.known	chr2	+	446	4	FSM	ENSG00000170035.16	ENST00000602632.1	446	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	342.948975796692	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAGAAATAGAAAGTGATTTT	180981893	False	NA	NA	False	AATAAA	-17	NA	180982022	180990005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_180982237_180984042_180984094_180987337_180987395_180989881
transcript_85158.known	chr2	+	851	5	FSM	ENSG00000150722.11	ENST00000495820.5	851	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.3721152139079	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGATTCTTCTTTTTAAC	NA	False	NA	9	True	ATTAAA	-19	NA	181954240	182117518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_181954635_181975218_181975265_182061441_182061480_182063730_182063792_182117206
transcript_85163.known	chr2	+	501	4	FSM	ENSG00000150722.11	ENST00000479855.1	501	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	5.90668171555645	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTTACAGTGATTCTTCT	182030609	False	NA	2	True	ATTAAA	-12	NA	182030882	182117511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182030980_182061441_182061480_182063730_182063792_182117206
transcript_85171.known	chr2	+	20144	24	FSM	ENSG00000077232.19	ENST00000264065.12	20144	24	0	0	0	0	multi-exon	FALSE	canonical	3	420	junction_11	60.5025581799134	208	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704135	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_85176.known	chr2	+	20086	24	FSM	ENSG00000077232.19	ENST00000680258.1	20086	24	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_13	128.153883161519	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704133	True	NA	NA	False	AATAAA	-20	NA	182716254	182794464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182736248_182736387_182740298_182740389_182741242_182741357_182743657_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_8518.known	chr1	-	485	3	FSM	ENSG00000179902.13	ENST00000462402.5	485	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGAAGTGTCTGTTATCC	NA	False	NA	NA	False	ATTAAA	-20	NA	109113844	109105950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109106099_109106534_109106660_109113632
transcript_85180.known	chr2	+	20006	23	FSM	ENSG00000077232.19	ENST00000616986.5	20006	23	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_10	117.921286255138	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCACCAATTTTCAGC	182704135	True	NA	NA	False	AATAAA	-20	NA	182716256	182794464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_182716484_182717015_182717073_182717940_182718291_182720006_182720170_182722024_182722076_182728575_182728659_182728862_182728995_182729847_182729942_182731029_182731108_182732498_182732543_182740298_182740389_182741242_182741357_182743597_182743713_182751657_182751786_182752071_182752189_182755002_182755105_182756313_182756470_182757691_182757826_182758836_182758891_182759159_182759308_182762681_182762802_182775315_182775421_182777120
transcript_85196.known	chr2	-	2637	6	FSM	ENSG00000162998.5	ENST00000295113.5	2637	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	2.85657137141714	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTGCTATGTTTCCTTCTA	-182866491	True	NA	NA	False	AATAAA	-19	NA	182866637	182833274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_182834966_182837947_182838012_182838408_182838614_182842477_182842544_182858785_182858834_182866074
transcript_85199.known	chr2	-	4989	32	FSM	ENSG00000061676.15	ENST00000360982.2	4989	32	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_30	178.593009547723	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTTAAGATCCTTGGAT	-183038839	False	19	1	True	AATAAA	-28	NA	183038858	182924876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_182925819_182926815_182926906_182928116_182928227_182928782_182928900_182930694_182930789_182934751_182934833_182935292_182935376_182942069_182942164_182952404_182952503_182952792_182952924_182953112_182953332_182956461_182956594_182957456_182957597_182962158_182962279_182964675_182964809_182967215_182967362_182976892_182976952_182978833_182978916_182981243_182981377_182982820_182982928_182983285_182983383_182986170_182986228_182989029_182989187_182994838_182994888_182995700_182995839_183001952_183002044_183002126_183002270_183002973_183003031_183003232_183003326_183023805_183023917_183024977_183024996_183037991
transcript_852.known	chr1	+	637	2	FSM	ENSG00000187608.10	ENST00000649529.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	560	junction_1	0	2771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCCGCCTCTGTGTCTGTG	1009220	True	NA	6	True	AATAAA	-19	NA	1013496	1014540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1013577_1013983
transcript_85203.known	chr2	+	5191	4	FSM	ENSG00000162999.13	ENST00000354221.5	5191	4	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_3	0.942809041582063	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTGGGAAGACACACAATT	183078409	True	NA	NA	False	NA	NA	NA	183078746	183100008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183079160_183083507_183083555_183087039_183087193_183095430
transcript_85205.known	chr2	+	726	4	FSM	ENSG00000162999.13	ENST00000469344.1	726	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	7.11805216802087	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTAGTAATCATTGCTTT	183078651	False	NA	NA	False	ATTAAA	-34	NA	183078988	183095903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183079160_183083507_183083555_183087157_183087193_183095430
transcript_8522.known	chr1	+	1882	12	FSM	ENSG00000031698.13	ENST00000369923.4	1882	12	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_9	385.620011654517	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGGCTTGAACCCCGCCTCT	109199243	True	NA	-20	True	AATAAA	-45	NA	109213981	109238148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109236804_109236871_109237243_109237374_109237730
transcript_85224.known	chr2	+	1545	9	FSM	ENSG00000163002.13	ENST00000295119.9	1545	9	0	0	0	0	multi-exon	FALSE	canonical	3	318	junction_1	31.034003528388	1037	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	183118815	True	NA	27	True	AATAAA	-15	NA	183124442	183161680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183151507_183151650_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_85229.known	chr2	+	998	8	FSM	ENSG00000163002.13	ENST00000374930.7	998	8	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	126.263249456306	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAGAAAGAAGCCTTTTT	183118784	True	NA	NA	False	NA	NA	NA	183124411	183161244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183157443_183157514_183158282_183158412_183159487_183159653_183161053
transcript_85231.known	chr2	+	2828	7	FSM	ENSG00000163002.13	ENST00000479162.5	2828	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	127.934879268061	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTATTAGTCTGTTTGCA	183118791	True	NA	27	True	AATAAA	-15	NA	183124418	183161680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_183124498_183128286_183128458_183130417_183130546_183133565_183133624_183157443_183157514_183158282_183158412_183159487
transcript_85251.nnic	chr2	+	1465	5	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-97	226814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	12.0208152801713	25	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTTGTGGTACTTTGT	185424098	True	NA	6	True	AATAAA	-20	NA	185424965	185732422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_185425508_185434096_185434192_185483033_185483092_185729348_185729420_185731723
transcript_85268.nnic	chr2	+	1407	4	NNC	ENSG00000286797.1	novel	3314	4	NA	NA	-97	226814	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	13.8804418757713	26	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTTGTGGTACTTTGT	185424098	True	NA	6	True	AATAAA	-20	NA	185424965	185732422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_185425508_185434096_185434192_185729348_185729420_185731723
transcript_85287.nnic	chr2	+	377	3	Intergenic	novelGene_30	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	19	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCTTGTGGTACTTTGT	185591442	True	NA	6	True	AATAAA	-20	NA	185591496	185732422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_185591564_185729348_185729420_185732183
transcript_8529.known	chr1	+	1914	11	FSM	ENSG00000031698.13	ENST00000234677.7	1914	11	0	0	0	0	multi-exon	FALSE	canonical	3	946	junction_5	82.1914837437553	3098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACACTTCTGCTTTTCCT	109199179	True	NA	14	True	NA	NA	NA	109213917	109238182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109214129_109223977_109224049_109228351_109228433_109229413_109229573_109230877_109231022_109231630_109231787_109235209_109235432_109235976_109236107_109236390_109236549_109237243_109237374_109237730
transcript_85304.known	chr2	+	2032	10	FSM	ENSG00000065548.18	ENST00000337859.11	2032	10	0	0	0	0	multi-exon	FALSE	canonical	3	547	junction_6	77.3114592307962	1989	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGGCCTTTTTTTAAGTT	186478200	True	NA	NA	False	AATAAA	-37	NA	186486259	186509361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031_186504215_186505450_186505598_186505739_186505842_186506712_186506837_186508542
transcript_85317.nic	chr2	+	858	6	ISM	ENSG00000065548.18	ENST00000337859.11	2032	10	-66	5195	-59	67	5prime_fragment	FALSE	canonical	3	570	junction_4	82.2498632217708	363	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAGAAAGAAGATGAAAT	NA	False	NA	NA	False	GATAAA	-7	NA	186486193	186504166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_186486458_186495232_186495335_186500181_186500294_186501272_186501426_186502495_186502588_186504031
transcript_85320.known	chr2	+	5731	8	FSM	ENSG00000144369.14	ENST00000304698.10	5731	8	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	5.28378343111627	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGGAGCATTGTTTAATTT	186691872	True	NA	10	True	AATAAA	-17	NA	186694059	186765959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_186694412_186740227_186740462_186743482_186743576_186747091_186747251_186751133_186751305_186753932_186754050_186761112_186761237_186761478
transcript_85321.known	chr2	-	729	3	FSM	ENSG00000064989.13	ENST00000479784.1	729	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCAGTGTGACTTGTCATTT	-187448014	False	NA	NA	False	ATTAAA	-25	NA	187448146	187428336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187428890_187431296_187431365_187448038
transcript_85327.nic	chr2	-	1502	9	NIC	ENSG00000003436.16	novel	3859	8	NA	NA	-86	204	combination_of_known_junctions	FALSE	canonical	3	19	junction_7	11.9052246933857	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACGTTTGTATCAGAGTTGC	-187565833	True	NA	NA	False	ATTAAA	-30	NA	187565846	187466797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_187467043_187467752_187467933_187484123_187484217_187484810_187484988_187488336_187488376_187496880_187497079_187503647_187503771_187554199_187554350_187565549
transcript_85331.known	chr2	-	804	5	FSM	ENSG00000003436.16	ENST00000421427.5	804	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	22.2148598915231	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAGGTTTCTGGGAACCCTT	-187563995	True	NA	NA	False	NA	NA	NA	187565760	187496880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_187497079_187503647_187503771_187529363_187529486_187554199_187554350_187565549
transcript_85335.nic	chr2	-	758	3	ISM	ENSG00000003436.16	ENST00000421427.5	804	5	-86	32294	-86	-32159	5prime_fragment	FALSE	canonical	3	44	junction_1	5.5	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGATGCAGCATTCTTACC	-187565833	True	NA	-20	True	AATAAA	-18	NA	187565846	187529174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_187529486_187554199_187554350_187565549
transcript_85337.nnic	chr2	-	905	3	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-48	-60961	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	24.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-187564043	True	NA	-1	True	AATAAA	-22	NA	187565808	187557976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187558398_187560648_187560874_187565549
transcript_85338.nnic	chr2	-	695	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-69	-60967	at_least_one_novel_splicesite	FALSE	canonical	3	35	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	-187565816	False	NA	-7	True	AATAAA	-16	NA	187565829	187557982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187558398_187565549
transcript_85339.nnic	chr2	-	575	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-48	-63542	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTTCGTCCTTACCCTAC	-187564043	True	NA	NA	False	AATATA	-19	NA	187565808	187560557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187560874_187565549
transcript_85340.nnic	chr2	-	443	2	NNC	ENSG00000003436.16	novel	804	5	NA	NA	-48	-63674	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCAGCCTAATCCCTTCC	-187564043	True	NA	-10	True	AATAAA	-16	NA	187565808	187560689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_187560874_187565549
transcript_85351.nnic	chr2	+	2411	3	NNC	ENSG00000289205.1	novel	1739	2	NA	NA	-338	0	at_least_one_novel_splicesite	FALSE	canonical	3	48	junction_1	155	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTGTCTGAGGGATTTT	188033346	True	NA	28	True	AATAAA	-17	NA	188033455	188040601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_188034061_188035422_188035757_188039129
transcript_85367.known	chr2	+	2643	13	FSM	ENSG00000144366.16	ENST00000409843.5	2643	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	152.555636481325	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAACCCA	188291650	False	NA	34	True	NA	NA	NA	188291668	188595059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188589739_188589751_188593939
transcript_85386.known	chr2	+	3294	12	FSM	ENSG00000144366.16	ENST00000409830.6	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	67.2415161013143	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAATTGCATAATTCATTT	188285736	True	NA	NA	False	AATAAA	-15	NA	188291873	188595926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_85392.known	chr2	+	3347	12	FSM	ENSG00000144366.16	ENST00000359135.7	3347	12	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	80.1356288317778	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGCATAATTCATTTGTTAA	188286634	False	NA	NA	False	AATAAA	-20	NA	188292771	188595931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180_188541319_188569238_188569356_188570027_188570121_188584264_188584404_188587854_188587950_188593939
transcript_854.known	chr1	+	1043	5	FSM	ENSG00000217801.11	ENST00000394517.7	1043	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.38484800354236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCGGCACCTAGGT	1059458	True	NA	23	True	NA	NA	NA	1059707	1066459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1061019_1061118_1063078_1063202_1065829
transcript_85414.known	chr2	+	1595	7	FSM	ENSG00000144366.16	ENST00000410051.5	1595	7	0	0	0	0	multi-exon	FALSE	canonical	3	211	junction_1	83.8876563559198	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAACTTAAAATAATGAAAGT	188285808	True	NA	NA	False	NA	NA	NA	188291945	188542122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_8542.known	chr1	+	804	2	FSM	ENSG00000031698.13	ENST00000482384.1	804	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTGTGCTGATTCTATGT	109199193	True	NA	NA	False	NA	NA	NA	109213931	109215153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109214129_109214546
transcript_85423.known	chr2	+	1242	7	FSM	ENSG00000144366.16	ENST00000409637.7	1242	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	103.825842426419	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTATGAAAATAAATATTCTT	188287035	True	NA	-25	True	NA	NA	NA	188292838	188541716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188293113_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096_188529196_188541180
transcript_85437.known	chr2	+	583	6	FSM	ENSG00000144366.16	ENST00000409927.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	154.164327910188	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGGAGTTGCAAATATCAA	188285876	True	NA	NA	False	AAGAAA	-24	NA	188292013	188529140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292220_188383762_188383890_188477658_188477731_188483430_188483493_188522755_188522828_188529096
transcript_8545.known	chr1	-	1584	8	FSM	ENSG00000134222.16	ENST00000369904.7	1584	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	167.246610044654	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276838	True	NA	-11	True	AATAAA	-27	NA	109283115	109279555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109280917_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283062
transcript_85460.known	chr2	+	1026	9	FSM	ENSG00000144366.16	ENST00000479019.5	1026	9	0	0	0	0	multi-exon	TRUE	canonical	2	7	junction_5	175.734885552072	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAAGTATCCCAGATGTTG	188285825	True	NA	NA	False	AATAAA	-33	NA	188291962	188541317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_188292167_188383762_188383890_188466474_188466569_188477658_188477731_188483430_188483493_188491435_188491595_188522755_188522828_188529096_188529196_188541180
transcript_85461.known	chr2	-	6829	54	FSM	ENSG00000204262.14	ENST00000374866.9	6829	54	0	0	0	0	multi-exon	FALSE	canonical	1	25	junction_52	16.9107135305129	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCCAAAGCTCTCAAATTTC	-189178366	True	NA	NA	False	AATAAA	-16	NA	189179761	189031897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189034217_189034915_189035156_189036615_189036804_189039271_189039564_189041585_189041694_189042719_189042774_189043150_189043259_189045178_189045233_189045799_189045908_189048208_189048263_189049346_189049455_189050568_189050677_189051319_189051482_189052171_189052226_189052748_189052803_189052910_189053019_189053423_189053478_189053894_189053949_189054158_189054213_189056972_189057027_189057319_189057428_189058428_189058528_189058848_189058894_189060729_189060784_189061561_189061616_189062864_189062919_189063009_189063064_189063171_189063271_189063979_189064034_189064556_189064656_189065003_189065058_189066389_189066498_189066728_189066783_189068014_189068114_189068225_189068271_189068785_189068885_189072039_189072094_189075392_189075438_189078515_189078570_189079062_189079108_189079977_189080032_189080989_189081044_189083983_189084038_189085159_189085214_189085718_189085773_189086725_189086771_189088694_189088773_189092309_189092421_189097276_189097331_189098726_189098760_189100106_189100140_189104263_189104278_189110224_189110450_189179507
transcript_85462.nic	chr2	-	1788	2	ISM	ENSG00000204262.14	ENST00000618828.1	6399	47	63	77056	-55	-23801	5prime_fragment	FALSE	canonical	3	53	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTAATAAAGTAATTCTCT	-189178421	True	NA	NA	False	NA	NA	NA	189179816	189108970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_189110450_189179507
transcript_85468.known	chr2	+	2647	21	FSM	ENSG00000115368.10	ENST00000314761.9	2647	21	0	0	0	0	multi-exon	FALSE	canonical	3	393	junction_13	49.9828970748995	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGATAATATGAACATGTAT	189434843	True	NA	25	True	AATAAA	-29	NA	189441473	189475552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804_189451896_189455319_189455445_189457310_189457382_189458752_189458873_189459335_189459425_189462483_189462643_189463693_189463754_189463845_189463962_189465078_189465255_189466424_189466583_189467467_189467649_189468474_189468570_189469343_189469440_189470075_189470246_189470818_189470879_189474185_189474333_189474716_189474809_189475212
transcript_85478.known	chr2	+	552	4	FSM	ENSG00000115368.10	ENST00000475596.1	552	4	0	0	0	0	multi-exon	FALSE	canonical	3	455	junction_3	48.883080463035	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTATGAATTCTGAAAT	189434837	True	NA	NA	False	TTTAAA	-35	NA	189441467	189452049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189441579_189448378_189448509_189450902_189450969_189451804
transcript_85481.known	chr2	+	2411	6	FSM	ENSG00000138381.10	ENST00000260952.9	2411	6	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	43.5320571533209	607	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGTTGAATTTTCATTTT	189657126	True	NA	65	True	TTTAAA	-6	NA	189661458	189670831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040_189667597_189667763_189667946_189670440
transcript_85482.known	chr2	+	643	4	FSM	ENSG00000286053.2	ENST00000607829.6	643	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	47.1333804808817	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	189657126	True	NA	9	True	AATAAA	-19	NA	189661458	189666401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665375_189665452_189666040
transcript_85483.known	chr2	+	573	4	FSM	ENSG00000286053.2	ENST00000605941.5	573	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	191.483680766795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGACTACCCAGCCTG	189657119	True	NA	-87	True	NA	NA	NA	189661451	189666305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665356_189665452_189666040
transcript_85484.known	chr2	+	535	4	FSM	ENSG00000286053.2	ENST00000607690.1	535	4	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	165.175327724479	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTCAAATTTTGTTTA	189657188	False	NA	9	True	AATAAA	-19	NA	189661520	189666401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189661611_189663900_189663955_189665421_189665452_189666040
transcript_85495.known	chr2	-	1910	9	FSM	ENSG00000128694.12	ENST00000264151.10	1910	9	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	27.1658678307909	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762029	True	NA	-7	True	AATAAA	-18	NA	189762792	189746659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189747169_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_8550.nic	chr1	-	1711	8	NIC	ENSG00000134222.16	novel	1742	8	NA	NA	-9	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_3	164.833868126768	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTCTGTATATCTGGAA	NA	False	NA	-22	True	AATAAA	-16	NA	109283195	109279566	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_109280157_109280395_109280490_109280776_109280970_109281107_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_85500.nic	chr2	-	2180	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-5	0	intron_retention	FALSE	canonical	3	18	junction_8	40.4720196555596	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762018	True	NA	-7	True	AATAAA	-18	NA	189762781	189746659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762566
transcript_85501.nic	chr2	-	2089	9	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-15	0	intron_retention	FALSE	canonical	3	81	junction_1	20.6212117733173	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762795	False	NA	-7	True	AATAAA	-18	NA	189762808	189746659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189754140_189754346_189755172_189755561_189761419_189761661_189762684
transcript_85518.nnic	chr2	-	1269	7	NIC	ENSG00000128694.12	novel	1910	9	NA	NA	-15	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_5	49.5997871859234	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCAGGAATCCTTTCATTC	-189762795	False	NA	-7	True	AATAAA	-18	NA	189762808	189746659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_189747332_189750549_189750657_189752652_189752725_189752848_189752980_189753915_189754065_189761646_189761661_189762684
transcript_85523.known	chr2	-	914	4	FSM	ENSG00000128694.12	ENST00000517895.5	914	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	48.8330489183981	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCCATAGAACATTTGGCCA	-189762029	True	NA	NA	False	AATAAA	-34	NA	189762792	189754286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189754346_189755172_189755561_189761419_189761661_189762566
transcript_85524.nic	chr2	-	951	4	ISM	ENSG00000128694.12	ENST00000522700.5	1779	8	390	3570	-15	139	5prime_fragment	FALSE	canonical	3	106	junction_3	7.58653778449403	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGGAAGGTATATTTCTAAT	-189762795	False	NA	NA	False	GATAAA	-22	NA	189762808	189754147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_189754346_189755172_189755561_189761419_189761661_189762684
transcript_85526.known	chr2	+	508	3	FSM	ENSG00000253559.1	ENST00000520651.1	508	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACTAATGTATTATTTATGA	NA	False	NA	7	True	AATAAA	-22	NA	189762703	189765556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189762993_189764854_189764976_189765458
transcript_85527.known	chr2	-	1596	3	FSM	ENSG00000128694.12	ENST00000518114.1	1596	3	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_2	6.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGAGTGCTCCACCATGAGT	-189762030	True	NA	NA	False	AATAAA	-6	NA	189762793	189754314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189755561_189761419_189761661_189762684
transcript_85529.known	chr2	+	544	2	FSM	ENSG00000253559.1	ENST00000521819.1	544	2	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAGGAACTTTATTAGTATA	189762722	True	NA	NA	False	NA	NA	NA	189762820	189765226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189762993_189764854
transcript_85530.known	chr2	-	874	3	FSM	ENSG00000128694.12	ENST00000521630.1	874	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	52	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAATTAAGAATTAATTTCT	-189762013	True	NA	NA	False	NA	NA	NA	189762776	189755172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189755561_189761419_189761661_189762531
transcript_85539.known	chr2	+	3156	13	FSM	ENSG00000064933.19	ENST00000441310.7	3156	13	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	60.2755247914847	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189775955	True	NA	22	True	AATAAA	-18	NA	189784449	189877629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_85560.known	chr2	+	2576	12	FSM	ENSG00000064933.19	ENST00000447232.6	2576	12	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	141.254825120541	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGATTCTCAAGAACCAAC	189776049	True	NA	22	True	AATAAA	-18	NA	189784543	189877629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189867798_189867930_189873495_189873657_189877271
transcript_85565.known	chr2	+	2795	12	FSM	ENSG00000064933.19	ENST00000409823.7	2795	12	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_5	134.396170252401	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAATATGTTTAAGAAGAT	189776006	True	NA	-7	True	NA	NA	NA	189784500	189877436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189818016_189818181_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_8557.known	chr1	-	1730	8	FSM	ENSG00000134222.16	ENST00000409267.5	1730	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_7	157.896375215274	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTGGAAGTCGATCCTGC	-109276848	True	NA	-11	True	AATAAA	-27	NA	109283125	109279555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283027
transcript_85579.known	chr2	+	3234	11	FSM	ENSG00000064933.19	ENST00000432292.7	3234	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	145.283860080878	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	189783868	True	NA	21	True	AATAAA	-17	NA	189784084	189877628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_8559.known	chr1	-	1742	8	FSM	ENSG00000134222.16	ENST00000369909.6	1742	8	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_7	121.929052639439	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATCTGGAAGTCGATCCTG	-109276891	True	NA	-12	True	AATAAA	-26	NA	109283168	109279556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282737_109283062
transcript_85597.known	chr2	+	948	5	FSM	ENSG00000064933.19	ENST00000374826.8	948	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	199.008165661613	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTCATGTTCAAAATAATT	189776013	True	NA	NA	False	ATTAAA	-16	NA	189784507	189806846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651_189805755_189806422
transcript_85609.nnic	chr2	-	1374	5	NNC	ENSG00000128699.14	novel	2150	5	NA	NA	101	0	at_least_one_novel_splicesite	FALSE	canonical	3	70	junction_4	400.396912450633	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTTCTCGTTTTATGTA	-189777215	False	NA	-1	True	ATTAAA	-20	NA	189784217	189771310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189783878
transcript_8561.known	chr1	-	1710	8	FSM	ENSG00000134222.16	ENST00000369903.6	1710	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_7	165.841576727395	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTGAATGTATTTTTATA	-109276845	True	NA	-40	True	NA	NA	NA	109283122	109279584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281047_109281136_109281252_109281618_109282061_109282517_109282576_109282679_109282790_109283073
transcript_85615.known	chr2	+	1882	4	FSM	ENSG00000064933.19	ENST00000409985.5	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_3	69.6036397515724	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTTCTGTCTTCATTTCA	189775955	True	NA	20	True	ATTAAA	-23	NA	189784449	189807054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189805651
transcript_85616.known	chr2	+	3417	12	FSM	ENSG00000064933.19	ENST00000624204.3	3417	12	0	0	0	0	multi-exon	FALSE	canonical	2	57	junction_3	127.515288339597	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATTTGATTCTCAAGAACCAA	189783868	True	NA	21	True	AATAAA	-17	NA	189784084	189877628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_189784594_189791789_189791942_189795768_189795952_189818016_189818181_189843963_189844081_189852654_189852778_189853938_189854083_189854238_189855129_189863742_189864229_189867798_189867930_189873495_189873657_189877271
transcript_85627.known	chr2	-	2009	4	FSM	ENSG00000128699.14	ENST00000392350.7	2009	4	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_3	189.504617357995	1805	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAAGCCCTCCAAATT	-189777362	True	NA	-15	True	AATAAA	-23	NA	189784364	189770322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189784268
transcript_85628.known	chr2	-	2150	5	FSM	ENSG00000128699.14	ENST00000392349.9	2150	5	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_4	373.856590151892	534	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTTAAGCAACTGAATTCG	-189777337	True	NA	1	True	ATTAAA	-20	NA	189784339	189770266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189771903_189775564_189775717_189782421_189782603_189783013_189783124_189784268
transcript_85629.known	chr2	-	1223	3	FSM	ENSG00000128699.14	ENST00000409519.5	1223	3	0	0	0	0	multi-exon	FALSE	canonical	3	549	junction_2	201	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ATTGACAAATAAAAAAATGT	-189777316	True	NA	NA	False	NA	NA	NA	189784318	189774724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_189775717_189782421_189782603_189784268
transcript_85630.known	chr2	+	692	2	FSM	ENSG00000187699.10	ENST00000443551.2	692	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGTGTGAAAAAGTACAAA	190180934	False	NA	8	True	AATAAA	-18	NA	190180954	190200214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_190181129_190199696
transcript_85636.known	chr2	-	2434	14	FSM	ENSG00000198130.16	ENST00000359678.10	2434	14	0	0	0	0	multi-exon	FALSE	canonical	3	443	junction_10	34.731088677294	1151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTTTCTCCTTCATCCC	-190315639	True	NA	NA	False	AATAAA	-16	NA	190319826	190203919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190205233_190208879_190208914_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_85637.known	chr2	-	2463	13	FSM	ENSG00000198130.16	ENST00000392332.7	2463	13	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	129.499758687034	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATAGTTTCTCCTTCATCC	-190315703	True	NA	NA	False	AATAAA	-15	NA	190319890	190203920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190205233_190212955_190213076_190244886_190244969_190246153_190246213_190249639_190249727_190252161_190252308_190261155_190261235_190287585_190287639_190290404_190290486_190294545_190294631_190296812_190296954_190310753_190310797_190319715
transcript_85638.known	chr2	+	1919	6	FSM	ENSG00000151689.13	ENST00000322522.8	1919	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	2.57681974534503	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGTGGCTCATGCCTGTAA	190343465	True	NA	NA	False	AATAAA	-14	NA	190343569	190371665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_190343962_190360038_190360307_190362626_190362688_190366694_190366896_190369102_190369278_190370843
transcript_85641.known	chr2	-	430	1	FSM	ENSG00000272979.1	ENST00000609166.1	430	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAATTGCGAGGCCTACAAT	NA	False	NA	NA	False	AATAAA	-18	NA	190454521	190454091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190454100_190454500
transcript_85643.known	chr2	-	6172	9	FSM	ENSG00000189362.12	ENST00000409150.8	6172	9	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	4.55350140002175	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGGTTGGGGAAATGAGA	-190534018	True	NA	NA	False	AATAAA	-15	NA	190534722	190504337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190509313_190510360_190510538_190514452_190514679_190516269_190516385_190517519_190517614_190518735_190518809_190518951_190519184_190525262_190525379_190534558
transcript_85650.known	chr2	+	2360	8	FSM	ENSG00000138386.17	ENST00000409581.5	2360	8	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	26.9390847230244	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACAGGAAATTTTTAGC	190648444	False	NA	NA	False	GATAAA	-11	NA	190649069	190690919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_190649361_190659157_190659996_190670325_190670460_190673100_190673153_190683737_190683828_190685475_190685639_190687200_190687318_190690244
transcript_85653.known	chr2	-	4116	25	FSM	ENSG00000115415.20	ENST00000361099.8	4116	25	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_21	17.4140249192681	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGAGGTTTAGCTGTCA	-191010871	True	NA	-6	True	ATTAAA	-17	NA	191014171	190969148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_85655.known	chr2	-	2716	23	FSM	ENSG00000115415.20	ENST00000392322.7	2716	23	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_19	16.9167260377034	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGGGAAAGTAGTTCT	-191010868	True	NA	-3	True	AATAAA	-17	NA	191014168	190975536	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_85658.known	chr2	-	2723	24	FSM	ENSG00000115415.20	ENST00000392323.6	2723	24	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_22	54.8623643038945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAGCCAA	-191010897	True	NA	-108	True	NA	NA	NA	191014197	190975641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986948_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191010366_191010450_191013524_191013679_191014017
transcript_85659.known	chr2	-	3937	25	FSM	ENSG00000115415.20	ENST00000673942.1	3937	25	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_12	41.2896274303043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTAAATATAATATGCACAC	-191010861	True	NA	-50	True	ATTAAA	-20	NA	191014161	190969311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_190970718_190974829_190974933_190975811_190975888_190976839_190977026_190978855_190979002_190979771_190979867_190980619_190980670_190982382_190982519_190983641_190983741_190984309_190984394_190985618_190985661_190986853_190986942_190987038_190987069_190989614_190989675_190991227_190991321_190995060_190995220_190997855_190998008_190998216_190998309_190999625_190999705_191001073_191001164_191007562_191007662_191008962_191009108_191009875_191010005_191013524_191013679_191014017
transcript_85660.known	chr2	+	4475	15	FSM	ENSG00000115419.13	ENST00000338435.8	4475	15	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_14	40.7389023326023	63	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGTTTTTTTTGTTT	190877157	True	NA	8	True	AATAAA	-16	NA	190880833	190935289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_190881471_190895151_190895249_190895603_190895726_190900563_190900694_190901946_190902027_190905003_190905168_190910262_190910322_190921023_190921057_190921144_190921204_190923916_190923984_190924542_190924594_190927305_190927483_190930436_190930569_190931544_190931638_190932715
transcript_85662.known	chr2	-	2560	24	FSM	ENSG00000138378.19	ENST00000392320.7	2560	24	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_13	1.67940938398504	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCGCTTGCCTGTGTTTGGT	-191150966	True	NA	NA	False	AAGAAA	-30	NA	191150994	191029575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_191029867_191030971_191031081_191031449_191031517_191032957_191033150_191033489_191033627_191033910_191034006_191034547_191034598_191036163_191036300_191039198_191039298_191041064_191041149_191054489_191054535_191058017_191058112_191058201_191058220_191058709_191058770_191061728_191061822_191062761_191062921_191064806_191064959_191066429_191066516_191069692_191069772_191073097_191073191_191076226_191076326_191146612_191146758_191148075_191148205_191150946
transcript_85669.known	chr2	+	1914	7	FSM	ENSG00000173559.15	ENST00000307834.9	1914	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	21.6236752966126	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTACGTAATTTTTGCCCTT	191677744	True	NA	NA	False	AATAAA	-22	NA	191678126	191686939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
transcript_85670.known	chr2	+	3002	7	FSM	ENSG00000173559.15	ENST00000307849.7	3002	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	19.4200640804527	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATTTTAGAAAATTT	191677753	True	NA	NA	False	ATTAAA	-22	NA	191678135	191687572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191682491_191682596_191683728_191683805_191684229_191684297_191685598
transcript_85672.known	chr2	+	11524	6	FSM	ENSG00000173559.15	ENST00000410026.7	11524	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	18.2690995946708	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGTATTTTGCTTTTATTT	191677753	True	NA	NA	False	AATAAA	-14	NA	191678135	191696662	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678242_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_85675.known	chr2	+	2269	6	FSM	ENSG00000173559.15	ENST00000425611.9	2269	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	6.97423830966508	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTAATTTTTGCCCTTTCAA	191677753	True	NA	NA	False	AATAAA	-26	NA	191678135	191686943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_191678706_191678989_191679129_191681945_191682018_191683728_191683805_191684229_191684297_191685598
transcript_85677.known	chr2	-	2799	10	FSM	ENSG00000144339.12	ENST00000272771.10	2799	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	4.5242829047783	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACCTGTGCGTGGACTTTA	-192194790	True	NA	NA	False	AATAAA	-22	NA	192194933	191949045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_191950408_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_85679.known	chr2	-	2842	10	FSM	ENSG00000144339.12	ENST00000392314.5	2842	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_5	5.11593974809837	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTGCGTGGACTTTAAAA	-192194773	True	NA	NA	False	AATAAA	-25	NA	192194916	191949042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_191950465_191953678_191953838_191956254_191956379_191998261_191998322_191999059_191999209_192057678_192057776_192179667_192179695_192184353_192184484_192191879_192191990_192194352
transcript_85685.nnic	chr2	-	558	4	Antisense	novelGene_ENSG00000286358.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	6	junction_1	3.74165738677394	27	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGTCTCAGGTGTGTCTT	NA	False	NA	NA	False	ATTAAA	-21	NA	193171256	193132529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_193132652_193160319_193160432_193167259_193167378_193171050
transcript_85689.known	chr2	+	1852	2	FSM	ENSG00000286358.1	ENST00000652985.1	1852	2	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTGTAAACATAAATTTTTAT	193170086	True	NA	NA	False	NA	NA	NA	193170703	193172765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_193170803_193171012
transcript_85691.known	chr2	+	5222	10	FSM	ENSG00000196950.14	ENST00000359634.10	5222	10	0	0	0	0	multi-exon	FALSE	canonical	3	889	junction_1	63.2410633905331	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGCCAGTGTGTTTTCTTT	195637549	True	NA	16	True	AATAAA	-20	NA	195657225	195737700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655_195708845_195713432_195713554_195716636_195717006_195718251_195718333_195728158_195728350_195734882
transcript_85699.nic	chr2	+	1680	5	ISM	ENSG00000196950.14	ENST00000359634.10	5222	10	-40	28858	-40	2166	5prime_fragment	FALSE	canonical	3	889	junction_1	78.582758923316	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTAAGTATTTTTTATTTA	195637509	True	NA	NA	False	NA	NA	NA	195657185	195708842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031_195681051_195683698_195683907_195706615_195706786_195708655
transcript_857.nic	chr1	+	868	4	FSM	ENSG00000217801.11	ENST00000456409.6	957	4	-14	103	-8	2	multi-exon	FALSE	canonical	2	4	junction_3	2.49443825784929	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATAATGATGGATAATTGT	1059429	True	NA	13	True	ATTAAA	-23	NA	1059678	1066353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1063078_1063202_1065829
transcript_8570.known	chr1	-	1826	7	FSM	ENSG00000134222.16	ENST00000409138.6	1826	7	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	151.940138066133	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTGTATATCTGGAAGT	-109276909	True	NA	-20	True	AATAAA	-18	NA	109283186	109279564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109280157_109280395_109280490_109280776_109281252_109281618_109282061_109282517_109282576_109282679_109282732_109283073
transcript_85703.nnic	chr2	+	664	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10320	-30483	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	103.5	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTATGTACTATTCATCA	195582514	True	NA	NA	False	ATTAAA	-21	NA	195586296	195628104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_195586418_195606135_195606234_195627659
transcript_85706.nnic	chr2	+	413	3	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10320	67	at_least_one_novel_splicesite	FALSE	canonical	3	203	junction_2	6	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	195582514	True	NA	NA	False	AATGAA	-7	NA	195586296	195680225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_195586418_195606135_195606234_195680031
transcript_85708.nnic	chr2	+	569	2	NNC	ENSG00000196950.14	novel	593	3	NA	NA	10320	-52004	at_least_one_novel_splicesite	FALSE	canonical	3	215	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCGACTTAAAACTGAGAGA	195582514	True	NA	33	True	ATTAAA	-45	NA	195586296	195606583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_195586418_195606135
transcript_85709.nic	chr2	+	550	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-202	57477	15	67	5prime_fragment	FALSE	canonical	3	889	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TACTATATTGAAAAACTTTT	195656843	True	NA	NA	False	AATGAA	-7	NA	195656925	195680225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031
transcript_85710.nic	chr2	+	619	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-5	57211	-5	58	5prime_fragment	FALSE	canonical	3	889	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATAAATGTGATCCAGAGA	195637446	True	NA	NA	False	AAAAAG	-4	NA	195657122	195680491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031
transcript_85711.nic	chr2	+	879	2	ISM	ENSG00000196950.14	ENST00000430412.5	4478	11	-5	56951	-5	318	5prime_fragment	FALSE	canonical	3	889	junction_1	0	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAGGAAAAGTAATGAAAAT	195637446	True	NA	59	True	AAAAAG	-1	NA	195657122	195680751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_195657282_195680031
transcript_85714.known	chr2	-	5273	8	FSM	ENSG00000081320.11	ENST00000263955.9	5273	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_6	5.46976849116476	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TATAAATCTGAAAACAAGTA	-196170203	True	NA	NA	False	AATAAA	-17	NA	196171578	196133582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196137730_196139619_196139800_196141248_196141298_196143559_196143687_196145910_196146056_196156438_196156652_196163261_196163428_196171332
transcript_85718.known	chr2	-	248	2	FSM	ENSG00000282836.1	ENST00000635064.1	248	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATTTTAAAGCGTCAGTG	NA	False	NA	NA	False	AATAAA	-22	NA	196639497	196638421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196638568_196639395
transcript_85732.known	chr2	+	2113	7	FSM	ENSG00000144395.18	ENST00000471546.5	2113	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	27.5801861245835	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGCCACATTGTCTCATTTG	196637904	True	NA	NA	False	AATACA	-17	NA	196639631	196667934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_196639779_196646340_196646505_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718
transcript_85734.nic	chr2	+	822	6	NIC	ENSG00000144395.18	novel	2113	7	NA	NA	-2	-1129	combination_of_known_junctions	FALSE	canonical	3	8	junction_4	30.8181764548132	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGAGTTGGAGATTGCTAC	196637902	True	NA	NA	False	NA	NA	NA	196639629	196666805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_196639779_196656632_196656854_196656957_196657137_196658791_196658861_196665566_196665684_196666718
transcript_85743.known	chr2	-	4261	18	FSM	ENSG00000119041.11	ENST00000263956.8	4261	18	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_8	26.4436464200034	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAAGCTGCTCCTTGCT	-196795927	True	NA	-7	True	ATTAAA	-18	NA	196799683	196763034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196764686_196766564_196766718_196769914_196770040_196771747_196771939_196772915_196773154_196775115_196775252_196776009_196776112_196776426_196776630_196778895_196779068_196780558_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_85744.known	chr2	-	1736	9	FSM	ENSG00000119041.11	ENST00000409364.3	1736	9	0	0	0	0	multi-exon	FALSE	canonical	3	256	junction_7	17.0948639947792	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACGGGACATTGGCTGGTGA	-196795903	True	NA	NA	False	AATAAA	-17	NA	196799659	196780088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196780663_196784856_196784930_196785440_196785589_196789203_196789370_196789878_196790071_196791336_196791461_196792955_196793153_196797796_196797909_196799509
transcript_85754.known	chr2	-	2443	20	FSM	ENSG00000197121.15	ENST00000409475.5	2443	20	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	13.8695944774723	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAGAA	-196923903	True	NA	NA	False	NA	NA	NA	196926730	196847475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_196848038_196870940_196870980_196872440_196872550_196872959_196873027_196873527_196873580_196873684_196873759_196875745_196875822_196880075_196880154_196885423_196885476_196885833_196885881_196890827_196890912_196892345_196892402_196893139_196893246_196897130_196897198_196898316_196898370_196902584_196902743_196912881_196913054_196916417_196916594_196919996_196920151_196926469
transcript_85755.known	chr2	-	651	5	FSM	ENSG00000115524.17	ENST00000414963.2	651	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	791.106938093707	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	-197399030	True	NA	NA	False	ATTAAA	-15	NA	197435079	197418795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197418952_197420427_197420543_197421028_197421134_197423807_197423975_197434971
transcript_85756.known	chr2	-	2127	4	FSM	ENSG00000115524.17	ENST00000487698.5	2127	4	0	0	0	0	multi-exon	FALSE	canonical	3	1804	junction_2	42.5519290592879	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTAGATGTTTGTGTT	-197399030	True	NA	NA	False	ATTAAA	-15	NA	197435079	197418795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197420543_197421028_197421134_197423807_197423975_197434971
transcript_85759.known	chr2	+	1355	5	FSM	ENSG00000115520.9	ENST00000409010.1	1355	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	130.072095393286	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACACCTGTA	197453775	True	NA	NA	False	AGTAAA	-15	NA	197453793	197474410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197454050_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_85760.known	chr2	+	879	4	FSM	ENSG00000115520.9	ENST00000409398.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	145.22013940528	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCATTGCTAGAATACTGGC	197449659	True	NA	NA	False	NA	NA	NA	197453492	197474168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197453665_197462538_197462732_197470069_197470172_197473756
transcript_85762.known	chr2	+	2239	5	FSM	ENSG00000115520.9	ENST00000263960.7	2112	5	-129	2	-70	-2	multi-exon	FALSE	canonical	3	287	junction_2	27.1477439209965	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGATCTCCTGTCCTCCT	197449589	True	NA	NA	False	AATATA	-29	NA	197453422	197475308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197453665_197459931_197460082_197462538_197462732_197470069_197470172_197473756
transcript_85767.known	chr2	-	2540	13	FSM	ENSG00000144381.18	ENST00000418022.2	2540	13	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_12	3983.99627677202	12582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197466382	True	NA	NA	False	AATAAA	-16	NA	197499840	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499141_197499439_197499781
transcript_85768.known	chr2	-	2449	13	FSM	ENSG00000144381.18	ENST00000428204.6	2449	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	3990.64893340948	12583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197466408	True	NA	NA	False	AATAAA	-16	NA	197499866	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499258_197499439_197499781
transcript_85769.known	chr2	-	2252	12	FSM	ENSG00000144381.18	ENST00000678761.1	2252	12	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_11	3362.45890201926	12583	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197499592	False	NA	NA	False	AATAAA	-16	NA	197499621	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499553
transcript_85771.known	chr2	-	2407	12	FSM	ENSG00000144381.18	ENST00000452200.6	2407	12	0	0	0	0	multi-exon	FALSE	canonical	1	318	junction_11	3299.24565633213	12952	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197500192	False	161	NA	False	AATAAA	-16	NA	197500221	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499998
transcript_85772.known	chr2	-	2299	12	FSM	ENSG00000144381.18	ENST00000345042.6	2299	12	0	0	0	0	multi-exon	FALSE	canonical	1	239	junction_11	3317.13581520699	12737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197500245	False	NA	NA	False	AATAAA	-16	NA	197500274	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197500159
transcript_85788.known	chr2	+	1447	8	FSM	ENSG00000115540.15	ENST00000409360.1	1447	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	551.618768087275	225	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGGTACATACAGGATGATC	197504415	False	NA	NA	False	CATAAA	-44	NA	197516159	197551279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516356_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_858.nic	chr1	+	971	4	FSM	ENSG00000217801.11	ENST00000456409.6	957	4	-14	0	-8	0	multi-exon	FALSE	canonical	2	4	junction_3	2.49443825784929	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	1059429	True	NA	20	True	NA	NA	NA	1059678	1066456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1063078_1063202_1065829
transcript_85820.known	chr2	+	557	4	FSM	ENSG00000115541.11	ENST00000233893.10	557	4	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	262.339474726927	92985	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGTTAATCTTTAGTTATT	197343019	True	NA	17	True	AATAAA	-14	NA	197500378	197503449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500440_197501073_197501239_197503038_197503129_197503208
transcript_85840.known	chr2	+	478	3	FSM	ENSG00000115541.11	ENST00000409729.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_1	6902.5	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCATTCCACTGAAGTTCTG	197493767	True	NA	-59	True	NA	NA	NA	197500139	197503296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500440_197503038_197503129_197503208
transcript_85844.known	chr2	+	639	3	FSM	ENSG00000115541.11	ENST00000465573.1	639	3	0	0	0	0	multi-exon	FALSE	canonical	2	727	junction_1	7223	1289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCCAGTGTCTCCAAAATT	197343183	False	NA	26	True	AATAAA	-18	NA	197500542	197503381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500919_197503038_197503129_197503208
transcript_85847.known	chr2	+	537	2	FSM	ENSG00000115541.11	ENST00000495200.1	537	2	0	0	0	0	multi-exon	FALSE	canonical	3	347	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTGCTGCTGAAACTGTAA	197343078	False	NA	-41	True	NA	NA	NA	197500437	197501129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500919_197501073
transcript_85849.known	chr2	+	1021	7	FSM	ENSG00000115540.15	ENST00000448447.6	1021	7	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_1	491.718641320646	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGTAGAAATGTTTTCTA	197504302	True	NA	121	True	NA	NA	NA	197516046	197551012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516147_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_85850.known	chr2	-	2245	12	FSM	ENSG00000144381.18	ENST00000388968.8	2245	12	0	0	0	0	multi-exon	FALSE	canonical	1	3336	junction_7	2156.01373828402	14362	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGTGTTAGCATTTCCA	-197466382	True	NA	NA	False	AATAAA	-18	NA	197499840	197486583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_85851.known	chr2	-	2413	13	FSM	ENSG00000144381.18	ENST00000678621.1	2413	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3831.99954603773	12187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197466460	True	NA	NA	False	AATAAA	-16	NA	197499918	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487287_197487380_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197494656_197494753_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_85852.known	chr2	+	570	3	FSM	ENSG00000115541.11	ENST00000409468.1	570	3	0	0	0	0	multi-exon	FALSE	canonical	3	14828	junction_1	321	2263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCAGTGTCTCCAAAATTG	197343019	True	NA	27	True	AATAAA	-19	NA	197500378	197503382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197500440_197501073_197501239_197503038
transcript_85853.known	chr2	+	3752	8	FSM	ENSG00000115540.15	ENST00000323303.9	3752	8	0	0	0	0	multi-exon	FALSE	canonical	3	1346	junction_1	125.478350031113	2944	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTTCAAGCATCTCATTG	197504321	True	NA	15	True	AGTAAA	-16	NA	197516065	197553699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516147_197523623_197523687_197535529_197535631_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_85854.known	chr2	+	1130	7	FSM	ENSG00000115540.15	ENST00000409355.2	1130	7	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_2	649.68310651339	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGCAAATGAAGCATTAG	197504339	True	NA	51	True	NA	NA	NA	197516083	197551183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197516147_197535529_197535606_197540110_197540154_197540350_197540438_197548335_197548416_197550274_197550387_197550514
transcript_85855.known	chr2	-	2200	11	FSM	ENSG00000144381.18	ENST00000676933.1	2200	11	0	0	0	0	multi-exon	FALSE	canonical	2	1168	junction_7	2837.04170572094	12525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAATTGTGTTAGCATTTC	-197466435	True	NA	NA	False	AATAAA	-16	NA	197499893	197486585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_197487199_197487857_197488037_197488316_197488492_197489001_197489248_197490196_197490297_197493323_197493493_197494156_197494251_197495293_197495377_197497139_197497393_197498674_197498851_197499781
transcript_85862.nnic	chr2	+	463	3	Antisense	novelGene_ENSG00000162944.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	13.5	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGTTTGGTAGTCTCTTC	197577346	True	NA	21	True	ATTAAA	-22	NA	197578660	197587688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_197578709_197580564_197580643_197587351
transcript_85868.nnic	chr2	+	587	3	NNC	ENSG00000287858.1	novel	989	2	NA	NA	-176	1881	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	12	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGTATTAGTTCTCAGTTT	197640089	True	NA	NA	False	ATTAAA	-21	NA	197640264	197643455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_197640502_197640646_197640808_197643266
transcript_85869.nnic	chr2	+	643	3	NNC	ENSG00000287858.1	novel	989	2	NA	NA	-176	1937	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAACTGTCTCCTAATTATT	197640089	True	NA	NA	False	ATTAAA	-23	NA	197640264	197643511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_197640502_197640646_197640808_197643266
transcript_8587.known	chr1	-	839	4	FSM	ENSG00000134222.16	ENST00000459765.1	839	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	199.1520915169	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGATGGTGATGTGGTGA	-109276868	True	NA	NA	False	AATAAA	-19	NA	109283145	109281403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109282061_109282517_109282576_109282679_109282732_109283073
transcript_85870.nnic	chr2	+	408	3	NNC	ENSG00000287858.1	novel	989	2	NA	NA	-98	2594	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTTGCTGCGTCATTT	197640167	True	NA	NA	False	CATAAA	-20	NA	197640342	197644168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_197640502_197640646_197640808_197644080
transcript_85877.known	chr2	+	1032	4	FSM	ENSG00000222017.1	ENST00000409845.1	1032	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTTTTTGTTGTAGTTG	NA	False	NA	NA	False	ATTAAA	-16	NA	197693105	197774823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197693217_197698809_197698865_197771856_197771915_197774015
transcript_85880.known	chr2	+	3027	1	FSM	ENSG00000247626.5	ENST00000282276.8	3027	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	58	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGATCTGTTCTGTTGCA	197703852	True	NA	13	True	ATTAAA	-25	NA	197705368	197708395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_197705400_197708400
transcript_85882.nnic	chr2	+	1008	4	Intergenic	novelGene_31	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.68178700572909	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCACTTGTACACATG	199179709	True	NA	NA	False	AATAAA	-34	NA	199179720	199252660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_199179963_199181816_199181919_199247269_199247500_199252226
transcript_85883.nnic	chr2	+	961	4	Intergenic	novelGene_32	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	3.68178700572909	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAATGCACTTGTACACATG	199179709	True	NA	NA	False	AATAAA	-34	NA	199179720	199252660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_+_199179963_199181816_199181919_199247316_199247500_199252226
transcript_85890.known	chr2	+	1663	1	FSM	ENSG00000225953.4	ENST00000668832.1	1663	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATTTGTTTGGTTTCGTTTT	199459697	True	NA	7	True	AATAAA	-20	NA	199459759	199461422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199459800_199461400
transcript_85891.known	chr2	-	944	4	FSM	ENSG00000226124.9	ENST00000416668.5	944	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	11.8133634311129	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATAATTTGTTTATAAA	-199851013	True	NA	NA	False	AATAAA	-22	NA	199851173	199760543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199760836_199846074_199846171_199848847_199848970_199850739
transcript_85894.nic	chr2	-	632	4	NIC	ENSG00000232732.11	novel	467	3	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_3	1.69967317119759	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATTCATGCAACCTGATTT	-199911129	True	NA	NA	False	AATAAA	-27	NA	199911175	199878494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_199878701_199879405_199879611_199909102_199909173_199911024
transcript_85895.nic	chr2	-	426	3	NIC	ENSG00000232732.11	novel	1267	3	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCATTCATGCAACCTGATT	-199911129	True	NA	NA	False	AATAAA	-26	NA	199911175	199878495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_199878701_199909102_199909173_199911024
transcript_85896.known	chr2	-	288	3	FSM	ENSG00000232732.11	ENST00000596619.5	288	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAACTGAAACCTGATATACT	-199911113	True	NA	NA	False	NA	NA	NA	199911159	199894562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199894664_199909102_199909173_199911042
transcript_85897.known	chr2	-	183	3	FSM	ENSG00000232732.11	ENST00000608419.1	183	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCAGAGCTGGTTTTC	-199911045	True	NA	NA	False	NA	NA	NA	199911091	199908930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199908995_199909102_199909173_199911042
transcript_85901.known	chr2	+	1495	6	FSM	ENSG00000162972.11	ENST00000295079.6	1495	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	132.612819893101	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAACTACTTACAAATTT	199955306	True	NA	0	True	AATAAA	-11	NA	199955316	199964108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199955337_199955496_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_85905.known	chr2	+	3691	2	FSM	ENSG00000178074.6	ENST00000319974.6	3691	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	104	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGTTTGGATGTGCTTTA	199908203	True	NA	17	True	ATTAAA	-18	NA	199911292	199928273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199911772_199925061
transcript_85906.known	chr2	-	4287	8	FSM	ENSG00000162971.11	ENST00000483328.5	4287	8	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	27.9985422361047	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATATTATATGCAGAGCT	-199955722	False	NA	NA	False	NA	NA	NA	199955736	199929974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_85907.known	chr2	-	5123	8	FSM	ENSG00000162971.11	ENST00000354611.9	5123	8	0	0	0	0	multi-exon	TRUE	canonical	3	62	junction_6	31.184768652635	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCTGGGACTTTGTATTG	-199954065	True	NA	-1	True	ATTAAA	-15	NA	199955491	199928912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199933324_199935930_199936048_199936404_199936493_199938932_199939071_199940088_199940134_199943764_199943835_199948317_199948473_199955392
transcript_85908.known	chr2	-	2042	7	FSM	ENSG00000162971.11	ENST00000441832.1	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	55.5517776493246	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGAGCCATTGTGTGT	-199954077	True	NA	-11	True	AATAAA	-28	NA	199955503	199931898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_199933324_199935930_199936048_199938932_199939071_199940088_199940134_199943764_199943835_199948336_199948473_199955392
transcript_85909.known	chr2	+	1386	5	FSM	ENSG00000162972.11	ENST00000392290.6	1399	5	21	-8	21	8	multi-exon	FALSE	canonical	3	314	junction_3	22.3313120975907	2146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTTATATATTTTTTAA	199955456	False	NA	17	True	AATAAA	-28	NA	199955602	199964125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_199956249_199959267_199959340_199959753_199959881_199961780_199961929_199963732
transcript_85913.known	chr2	+	2648	13	FSM	ENSG00000196141.14	ENST00000409718.5	2648	13	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	347.525738455282	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200305839	False	NA	15	True	ATTAAA	-16	NA	200305892	200478530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306293_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_85916.known	chr2	+	2698	13	FSM	ENSG00000196141.14	ENST00000409988.7	2698	13	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	315.750120964171	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACACCTGGCTAGTTTCTTTT	200306126	False	NA	14	True	ATTAAA	-15	NA	200306150	200478529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_85919.known	chr2	+	6212	13	FSM	ENSG00000196141.14	ENST00000409140.8	6212	13	0	0	0	0	multi-exon	FALSE	canonical	3	325	junction_6	254.585611009997	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTTTATTCTTAGTTT	200292922	True	NA	NA	False	AATAAA	-13	NA	200306692	200482264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_85926.known	chr2	+	2119	12	FSM	ENSG00000196141.14	ENST00000360760.9	2119	12	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	244.737099627098	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200306297	False	NA	15	True	ATTAAA	-16	NA	200306523	200478530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_85929.nic	chr2	+	2117	12	NIC	ENSG00000196141.14	novel	6212	13	NA	NA	-25	0	combination_of_known_junctions	FALSE	canonical	3	731	junction_1	117.768718573228	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGGCTAGTTTCTTTTA	200293076	False	NA	15	True	ATTAAA	-16	NA	200306846	200478530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_200306923_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_8593.nnic	chr1	-	539	4	NIC	ENSG00000221986.7	novel	1342	9	NA	NA	-637	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	1.24721912892465	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTACGTGTCCCTGTATTTG	NA	False	NA	NA	False	AATAAA	-18	NA	109296990	109292364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_109292465_109294205_109294250_109295110_109295298_109296782
transcript_8594.known	chr1	-	6990	20	FSM	ENSG00000134243.12	ENST00000256637.8	6990	20	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_13	63.7184336056956	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTACTGAAATGACTAAGCT	-109392245	True	NA	-14	True	AATAAA	-24	NA	109397918	109309574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109314058_109314260_109314385_109314671_109314779_109316849_109316959_109317852_109317970_109322931_109323122_109324898_109325090_109326991_109327161_109327498_109327602_109336239_109336347_109340723_109340880_109342013_109342159_109345750_109345882_109347482_109347533_109350928_109351003_109354366_109354532_109355366_109355470_109367407_109367482_109369529_109369590_109397586
transcript_85952.known	chr2	+	2250	14	FSM	ENSG00000196141.14	ENST00000451764.6	2250	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	399.355145884435	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAGTGTCAATCAGAAT	200305973	True	NA	-79	True	NA	NA	NA	200306375	200478102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200308886_200309091_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249_200419497_200439121_200439329_200440648_200440785_200459768_200459828_200467289_200467400_200469913_200470017_200472831_200473053_200477635
transcript_85959.nic	chr2	+	736	5	ISM	ENSG00000196141.14	ENST00000409988.7	2698	13	-15	62101	-15	-2905	5prime_fragment	FALSE	canonical	3	201	junction_1	367.008514887598	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAGATTAATATTGATTGT	200306120	False	NA	33	True	AAAAAG	-4	NA	200306135	200416428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200306602_200329430_200329481_200389222_200389284_200412310_200412420_200416378
transcript_85960.known	chr2	+	561	6	FSM	ENSG00000196141.14	ENST00000439395.5	561	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	427.284448581972	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTCCACAGATTCTGCTAAC	200306189	False	NA	NA	False	NA	NA	NA	200306275	200419397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306419_200329430_200329481_200389222_200389284_200412310_200412420_200416378_200416429_200419249
transcript_85967.known	chr2	+	1730	3	FSM	ENSG00000196141.14	ENST00000471601.5	1730	3	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	405.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAAGGCCAG	200292783	True	NA	NA	False	AATGAA	-39	NA	200306553	200390854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306602_200329430_200329481_200389222
transcript_85969.known	chr2	+	1901	3	FSM	ENSG00000196141.14	ENST00000459656.5	1901	3	0	0	0	0	multi-exon	FALSE	canonical	3	731	junction_1	140.5	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCAGAGTAGGGCCAGGTG	200292947	True	NA	NA	False	NA	NA	NA	200306717	200390868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200306923_200329430_200329481_200389222
transcript_85970.nic	chr2	+	721	2	ISM	ENSG00000196141.14	ENST00000428692.5	541	5	-309	59489	-31	-42397	5prime_fragment	FALSE	canonical	3	201	junction_1	0	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCTTTTAAAGACATTC	200306158	False	NA	NA	False	NA	NA	NA	200306244	200329794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200306602_200329430
transcript_85972.nic	chr2	+	440	2	ISM	ENSG00000196141.14	ENST00000471533.5	329	3	120	42397	-25	-42397	5prime_fragment	FALSE	canonical	3	731	junction_1	0	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGGCTTTTAAAGACATTC	200293076	False	NA	NA	False	NA	NA	NA	200306846	200329794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200306923_200329430
transcript_85974.known	chr2	+	4478	9	FSM	ENSG00000163535.18	ENST00000357799.9	4478	9	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	21.7586189819115	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATCAATACACAGTTTATTG	200522280	True	NA	NA	False	AATAAA	-17	NA	200526206	200584096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049_200573978_200575310_200575462_200583448
transcript_85978.nic	chr2	+	1327	7	ISM	ENSG00000163535.18	ENST00000357799.9	4478	9	-123	12594	-83	1360	5prime_fragment	FALSE	canonical	3	188	junction_3	14.0435829552939	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GTAATAAAAAAACAAATGAA	200522157	True	NA	NA	False	ATTAAA	-8	NA	200526083	200571502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662_200569893_200571049
transcript_85981.known	chr2	-	2939	7	FSM	ENSG00000155729.13	ENST00000359878.8	2939	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	2.21735578260835	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-200509672	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200509627
transcript_85982.known	chr2	-	2556	7	FSM	ENSG00000155729.13	ENST00000409157.5	2556	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	9.48097510221859	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTATTTTCTGTGTCTGT	-200509672	True	NA	NA	False	AATAAA	-16	NA	200510068	200488957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200490617_200493171_200493275_200497752_200497848_200498890_200499085_200504747_200504960_200506856_200507092_200510010
transcript_85984.known	chr2	+	1041	6	FSM	ENSG00000163535.18	ENST00000409203.3	1041	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_3	13.9283882771841	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTCTCAATATCTTAGC	200522240	True	NA	NA	False	AATAAA	-13	NA	200526166	200570142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200526253_200532973_200533109_200534995_200535172_200536064_200536143_200542578_200542665_200569662
transcript_860.known	chr1	+	977	4	FSM	ENSG00000217801.11	ENST00000427998.6	982	4	5	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	3.74165738677394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTTGCCTCGGCACCTA	1059484	True	NA	20	True	NA	NA	NA	1059733	1066456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059847_1060279_1060394_1063078_1063202_1065829
transcript_86000.known	chr2	+	6511	12	FSM	ENSG00000082153.18	ENST00000409600.6	6511	12	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	126.803224924446	1708	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGACTGTTCAGTTGGT	200796162	True	NA	24	True	AATAAA	-34	NA	200811909	200827338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200811991_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754_200818902_200819981_200820121_200821182_200821306_200822146
transcript_86030.known	chr2	+	265	2	FSM	ENSG00000082153.18	ENST00000460660.1	265	2	0	0	0	0	multi-exon	FALSE	canonical	3	1532	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCGTTGACTGCCATTT	200796175	True	NA	NA	False	ACTAAA	-34	NA	200811922	200813404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200811991_200813207
transcript_86031.known	chr2	+	1075	9	FSM	ENSG00000082153.18	ENST00000410110.6	1075	9	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	494.117885099295	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGTCTGGTCAAGTGTAATG	200806986	True	NA	50	True	AAAACA	-28	NA	200811545	200818818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200811728_200813207_200813282_200815340_200815518_200815666_200815762_200816324_200816391_200817105_200817242_200817973_200818084_200818222_200818394_200818754
transcript_86032.known	chr2	+	779	5	FSM	ENSG00000082153.18	ENST00000359893.4	779	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	832.71585039556	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATAAAAATTCTGTTTGC	200818265	False	NA	NA	False	TATAAA	-37	NA	200818325	200822550	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200818394_200818754_200818902_200819981_200820019_200821182_200821306_200822146
transcript_86033.known	chr2	-	2026	13	FSM	ENSG00000013441.17	ENST00000434813.3	2026	13	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_12	36.6208046516367	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCATGTTTATTTTGTTTGGG	-200863055	False	NA	-130	True	NA	NA	NA	200864561	200853195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200860124_200860216_200861237_200861467_200861701_200861863_200864100
transcript_86041.known	chr2	-	1843	12	NNC	ENSG00000013441.17	novel	1847	13	NA	NA	-53	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_9	34.1237417653181	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGTTTTTGGAGACTTC	NA	False	NA	57	True	ATTAAA	-14	NA	200864744	200853008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859748_200861237_200861467_200861701_200861863_200864563
transcript_86042.known	chr2	-	1682	12	FSM	ENSG00000013441.17	ENST00000432425.5	1682	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_11	23.2514106921183	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863150	True	NA	-15	True	AATAAA	-18	NA	200864656	200853080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200859747_200861237_200861467_200861701_200861863_200864563
transcript_86043.known	chr2	-	3208	11	FSM	ENSG00000013441.17	ENST00000473565.5	3208	11	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_10	22.277567192133	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGATATGTATCTGAACAG	-200863185	True	NA	-15	True	AATAAA	-18	NA	200864691	200853080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200853450_200853902_200853994_200854615_200854696_200855003_200855087_200856681_200856812_200856890_200856986_200857717_200857885_200857972_200858090_200859679_200861467_200861701_200861863_200864563
transcript_86061.known	chr2	-	1166	7	FSM	ENSG00000240344.9	ENST00000392283.9	1166	7	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_6	49.6635905087643	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889052	False	NA	55	True	AATGAA	-18	NA	200889077	200870906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200887612_200887686_200888955
transcript_86064.known	chr2	-	1370	7	FSM	ENSG00000240344.9	ENST00000286175.12	1370	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	159.45288401977	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCTCATCTCCAAGATATC	-200889244	False	NA	55	True	AATGAA	-18	NA	200889269	200870906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200888955
transcript_86070.known	chr2	-	725	6	FSM	ENSG00000240344.9	ENST00000409264.6	725	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_5	148.145064041972	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTATAATGATTATCCAA	-200888990	False	NA	-71	True	NA	NA	NA	200889015	200871212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200882341_200882436_200885697_200885773_200888955
transcript_86075.known	chr2	-	1222	6	FSM	ENSG00000240344.9	ENST00000465823.5	1222	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	141.903629270008	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGTATAAGGTATATATGA	-200889251	False	NA	6	True	ATTAAA	-28	NA	200889276	200870955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200888955
transcript_86080.known	chr2	-	756	7	FSM	ENSG00000240344.9	ENST00000409449.5	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	172.743949886015	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTACCAAGGGGCGCCC	-200889278	False	NA	NA	False	NA	NA	NA	200889303	200871266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200871522_200876918_200877038_200881420_200881489_200885261_200885368_200885697_200885773_200887612_200887686_200889243
transcript_86081.known	chr2	-	313	5	FSM	ENSG00000240344.9	ENST00000443398.5	313	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	169.726986657986	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGCAAACAGCCACATTTGG	-200889241	False	NA	NA	False	NA	NA	NA	200889266	200876963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200877038_200881420_200881489_200885697_200885773_200887612_200887686_200889243
transcript_86086.known	chr2	+	1679	8	FSM	ENSG00000196290.17	ENST00000409357.5	1679	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	210.711525405649	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAGATTGAATAAAATCTG	200881413	True	NA	-8	True	ATTAAA	-27	NA	200889414	200903896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889653_200890522_200890586_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_86094.nic	chr2	+	1562	7	NIC	ENSG00000196290.17	novel	1689	7	NA	NA	-141	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	159.814128147531	803	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	NA	False	NA	21	True	AATAAA	-15	NA	200889185	200903925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_86100.known	chr2	+	1689	7	FSM	ENSG00000196290.17	ENST00000409020.6	1689	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	137.797456031992	1434	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200881369	True	NA	21	True	AATAAA	-15	NA	200889370	200903925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889653_200891917_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_86101.known	chr2	+	1626	7	FSM	ENSG00000196290.17	ENST00000359683.8	1626	7	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_1	144.991666427189	1050	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGAAGGAGCTCAAGTGA	200881386	True	NA	26	True	AATAAA	-20	NA	200889387	200903930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889653_200891968_200892380_200893245_200893409_200895263_200895391_200897075_200897215_200899384_200899469_200903493
transcript_86126.known	chr2	+	749	4	FSM	ENSG00000196290.17	ENST00000426253.5	749	4	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	181.026701529544	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGTCACTGGAGAAGGTA	NA	False	NA	NA	False	NA	NA	NA	200889326	200895373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200889392_200891968_200892380_200893245_200893409_200895263
transcript_86127.known	chr2	+	1269	5	FSM	ENSG00000196290.17	ENST00000409588.1	1269	5	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	192.241222166319	508	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTTGGAAGGAGCTCA	200883915	False	NA	21	True	AATAAA	-15	NA	200891916	200903925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_200892380_200893245_200893409_200895263_200895391_200899384_200899469_200903493
transcript_86129.known	chr2	-	4288	18	FSM	ENSG00000115942.9	ENST00000234296.7	4288	18	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_2	22.2791351176767	207	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAATTGGTAGTGCTGGTTT	-200954813	True	NA	97	True	AATAAA	-31	NA	200963660	200908976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200911388_200913294_200913414_200913930_200913993_200920221_200920394_200920992_200921140_200925835_200925933_200926767_200926901_200931338_200931449_200933875_200933975_200935698_200935893_200937905_200937967_200941247_200941280_200942684_200942778_200949553_200949644_200957400_200957545_200958029_200958134_200959391_200959441_200963489
transcript_86142.known	chr2	-	9333	12	FSM	ENSG00000155744.10	ENST00000418596.7	9333	12	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_7	4.71151218903634	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCCCTGAGTTGATTTTAT	-201070561	True	NA	1	True	TATAAA	-30	NA	201071669	200973717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_200981872_200988261_200988422_200992280_200992369_200992886_200993004_200997444_200997541_201008972_201009089_201011391_201011473_201016990_201017171_201022830_201022933_201023958_201024040_201045495_201045594_201071609
transcript_86153.known	chr2	+	503	4	FSM	ENSG00000119013.10	ENST00000433898.5	503	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	851.509378822231	1009	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCAATCTGCTTTTGTCAT	201053177	True	NA	4	True	ATTAAA	-12	NA	201072007	201085744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201072338_201072362_201078880_201079023_201085458
transcript_86156.known	chr2	+	547	4	FSM	ENSG00000119013.10	ENST00000454214.1	547	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	846.100992133261	3312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053199	True	NA	10	True	ATTAAA	-18	NA	201072029	201085750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201072278_201072362_201078880_201079023_201085458
transcript_86158.known	chr2	+	555	4	FSM	ENSG00000119013.10	ENST00000684175.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	840.041797901879	2677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053191	True	NA	10	True	ATTAAA	-18	NA	201072021	201085750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201073070_201073154_201078880_201079023_201085458
transcript_8616.known	chr1	-	3815	9	FSM	ENSG00000143106.13	ENST00000271308.9	3815	9	0	0	0	0	multi-exon	FALSE	canonical	3	2112	junction_8	152.036128518849	7621	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTAATGACTTGCA	-109403673	True	NA	-11	True	ATTAAA	-17	NA	109426448	109399041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109402091_109409927_109410015_109411010_109411114_109411876_109411936_109412076_109412185_109413067_109413136_109415236_109415364_109421859_109421927_109426301
transcript_86163.known	chr2	+	564	3	FSM	ENSG00000119013.10	ENST00000450023.6	564	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	928.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATAATACCTGGAAGCATC	NA	False	NA	NA	False	AATAAA	-19	NA	201071432	201085615	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201071698_201078880_201079023_201085458
transcript_86168.known	chr2	+	493	3	FSM	ENSG00000119013.10	ENST00000237889.9	493	3	0	0	0	0	multi-exon	FALSE	canonical	3	1440	junction_1	208.5	22798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCTTTTGTCATTCTTAA	201053170	True	NA	10	True	ATTAAA	-18	NA	201072000	201085750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072060_201078880_201079023_201085458
transcript_86169.known	chr2	+	1548	3	FSM	ENSG00000119013.10	ENST00000682325.1	1548	3	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_1	850	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATATATATATGCCAATCTG	201053193	True	NA	-6	True	ATTAAA	-2	NA	201072023	201085734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201073154_201078880_201079023_201085458
transcript_8617.known	chr1	+	2448	11	FSM	ENSG00000162650.17	ENST00000683729.1	2448	11	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_10	10.4804580052591	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTGTCTCCCTGTTCTGTT	109482568	True	NA	21	True	AAAAAG	-19	NA	109483904	109492734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109484081_109486056_109486123_109486505_109486611_109487006_109487218_109487517_109487805_109488382_109488466_109488846_109489101_109489929_109490129_109490270_109490393_109490921_109491718_109492585
transcript_86170.known	chr2	+	739	3	FSM	ENSG00000119013.10	ENST00000684420.1	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	887	1039	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAATCTGCTTTTGTCATT	201053221	True	NA	5	True	ATTAAA	-13	NA	201072051	201085745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201072362_201078880_201079023_201085458
transcript_86171.known	chr2	+	14612	10	FSM	ENSG00000003402.21	ENST00000309955.8	14612	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	23.7112256583717	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCCGTGGCTCATGCCTGT	201116019	True	NA	NA	False	ATTAAA	-20	NA	201116163	201176687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_86173.known	chr2	+	2128	10	FSM	ENSG00000003402.21	ENST00000423241.6	2128	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_9	23.6929952663516	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCTGGGTGTGGG	201118469	True	NA	NA	False	AGTAAA	-6	NA	201118490	201164110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201145377_201145433_201149002_201149053_201149753_201149836_201160431_201160943_201163834
transcript_86176.known	chr2	+	1283	6	FSM	ENSG00000003402.21	ENST00000341222.10	1283	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	6.60302960768767	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201116022	True	NA	17	True	AATAAA	-17	NA	201116166	201141598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_86179.nic	chr2	+	1436	6	NIC	ENSG00000003402.21	novel	2128	10	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	16	junction_1	20.1891059732718	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201118383	False	NA	17	True	AATAAA	-17	NA	201118433	201141598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_201118902_201129728_201130147_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_86180.known	chr2	+	4415	5	FSM	ENSG00000003402.21	ENST00000395148.6	4415	5	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_4	24.0455297300766	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATACTTTGCGTCTGTGTCTT	201116038	True	NA	NA	False	NA	NA	NA	201116406	201139877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201116482_201129728_201130147_201133028_201133135_201135971_201136108_201136197
transcript_86181.nic	chr2	+	868	5	NIC	ENSG00000003402.21	novel	1283	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	25.8505319094211	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	201116019	True	NA	17	True	AATAAA	-17	NA	201116163	201141598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_201116482_201133028_201133135_201135971_201136108_201140356_201140440_201141373
transcript_86186.nnic	chr2	+	648	3	NNC	ENSG00000003402.21	novel	1091	6	NA	NA	-510	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	34	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCATTTGTTTTTTTACT	NA	False	NA	17	True	AATAAA	-17	NA	201139675	201141598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_201140016_201140356_201140440_201141373
transcript_86188.known	chr2	+	529	2	FSM	ENSG00000003402.21	ENST00000490965.1	529	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTCCAATGCCTCCTTGCCT	201118501	False	NA	3	True	ATTAAA	-14	NA	201118522	201119177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201118902_201119027
transcript_86189.known	chr2	+	1126	6	FSM	ENSG00000003400.15	ENST00000374650.7	1126	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	3.13687742827162	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGCCTGCTTGCTGTGAGTTT	201182985	True	NA	6	True	ATTAAA	-18	NA	201183159	201200728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201183309_201185770_201186125_201187705_201187800_201192983_201193120_201195841_201195949_201200442
transcript_86192.nic	chr2	+	387	3	NIC	ENSG00000064012.23	novel	2911	3	NA	NA	10	-2468	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	2.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCATCAATCCACCATGAAGA	201233159	True	NA	NA	False	ATTAAA	-22	NA	201233452	201240457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_201233555_201234015_201234113_201240269
transcript_86193.known	chr2	+	2911	3	FSM	ENSG00000064012.23	ENST00000490682.5	2911	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	4.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACAACATGGATGAATCTTG	201233171	True	NA	NA	False	TATAAA	-23	NA	201233464	201242925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201233623_201234015_201234113_201240269
transcript_86196.known	chr2	+	2222	12	FSM	ENSG00000082146.13	ENST00000194530.8	2222	12	0	0	0	0	multi-exon	FALSE	canonical	3	287	junction_9	26.9808625167684	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTATGCTTTTATTTATTT	201448477	True	NA	12	True	AATAAA	-16	NA	201451739	201480846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201451939_201454745_201454853_201458783_201458865_201469952_201470053_201472954_201473077_201474646_201474756_201475618_201475743_201477618_201477791_201478086_201478192_201478356_201478602_201479488_201479532_201480031
transcript_86198.known	chr2	+	616	4	FSM	ENSG00000082146.13	ENST00000415688.1	616	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	133.209942905509	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGCTTCCAAGTACATCT	201478137	True	NA	NA	False	NA	NA	NA	201478149	201480523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_201478192_201478562_201478602_201479488_201479532_201480031
transcript_862.nnic	chr1	+	751	3	FSM	ENSG00000217801.11	ENST00000692821.1	722	3	-21	-8	-8	8	multi-exon	FALSE	canonical	2	6	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATGGATAATTGTTCATGA	1059429	True	NA	19	True	ATTAAA	-29	NA	1059678	1066359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1065829
transcript_86200.known	chr2	-	6389	16	FSM	ENSG00000115993.13	ENST00000332624.8	6389	16	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_5	6.09334792120792	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTCCCTGTGTCTTTG	-201449246	True	NA	0	True	AATAAA	-22	NA	201451458	201377206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201381219_201384110_201384217_201386217_201386485_201387702_201388002_201389299_201389504_201389800_201389881_201392908_201393047_201394797_201394873_201395313_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_86201.known	chr2	-	1436	8	FSM	ENSG00000115993.13	ENST00000430254.1	1436	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	4.76380914300945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTCTCTTTGTAAAATG	-201449288	True	NA	NA	False	AATAAA	-14	NA	201451500	201395127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201395445_201397501_201397581_201398144_201398355_201399376_201399494_201401017_201401095_201407402_201407598_201420416_201420707_201451349
transcript_86214.known	chr2	-	5592	13	FSM	ENSG00000155755.20	ENST00000409444.6	5592	13	0	0	0	0	multi-exon	TRUE	canonical	1	24	junction_11	122.258009280919	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGTTCTGTTTGCATTT	-201642705	False	NA	-5	True	AATAAA	-20	NA	201642944	201620183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640260_201640266_201640892_201640925_201642608
transcript_86216.nic	chr2	-	1831	12	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-34	-13	combination_of_known_junctions	FALSE	canonical	2	159	junction_10	73.8996415741876	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTATATAACCTAAAT	-201639347	True	NA	89	True	AATAAA	-23	NA	201642704	201623699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
transcript_86218.nic	chr2	-	1775	12	NIC	ENSG00000155755.20	novel	1805	12	NA	NA	-34	0	combination_of_known_junctions	FALSE	canonical	2	159	junction_10	73.8996415741876	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGAAAGATGCTCTACA	-201639347	True	NA	33	True	AATATA	-5	NA	201642704	201623755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
transcript_8622.nnic	chr1	+	1089	3	NNC	ENSG00000174151.15	novel	5077	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.5	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTCTTGTCCTTC	109493733	True	NA	11	True	ATTAAA	-20	NA	109494089	109500435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_109494288_109494519_109494575_109499599
transcript_86221.nic	chr2	-	1714	12	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-34	-61	combination_of_known_junctions	FALSE	canonical	2	159	junction_10	73.8996415741876	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGTCTTTTCTGAAACTG	-201639347	True	NA	-28	True	AATAAA	-13	NA	201642704	201623816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
transcript_86222.nic	chr2	-	1514	12	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-34	-261	combination_of_known_junctions	FALSE	canonical	2	159	junction_10	73.8996415741876	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAAAGTGTTTATTTCCTA	-201639347	True	NA	-3	True	AATGAA	-15	NA	201642704	201624016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
transcript_86224.nic	chr2	-	1428	12	NIC	ENSG00000155755.20	novel	5592	13	NA	NA	-34	-347	combination_of_known_junctions	FALSE	canonical	2	159	junction_10	73.8996415741876	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTGTTTGCTGTTTATGTC	-201639347	True	NA	-12	True	NA	NA	NA	201642704	201624102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201642608
transcript_86225.known	chr2	-	1805	12	FSM	ENSG00000155755.20	ENST00000286196.9	1805	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_11	115.771219249914	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTTGAAAGATGCTCTACA	-201643245	True	NA	33	True	AATATA	-5	NA	201643484	201623755	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639046_201640892_201640925_201643358
transcript_8623.nnic	chr1	+	1088	3	NNC	ENSG00000174151.15	novel	5077	4	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_2	1.5	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTATGTTCTTGTCCTTC	109493733	True	NA	11	True	ATTAAA	-20	NA	109494089	109500435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_109494288_109494519_109494583_109499608
transcript_86238.known	chr2	-	1824	12	NNC	ENSG00000155755.20	novel	5592	13	NA	NA	-22	-13	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_10	112.233890964324	382	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAATTATATAACCTAAAT	-201639335	True	NA	89	True	AATAAA	-23	NA	201642692	201623699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_201624323_201626025_201626148_201627320_201627415_201628075_201628150_201629229_201629422_201629728_201629853_201632050_201632209_201633310_201633432_201636747_201636886_201638988_201639051_201640892_201640925_201642608
transcript_86239.known	chr2	-	3148	13	FSM	ENSG00000003393.16	ENST00000482789.6	3148	13	0	0	0	0	multi-exon	FALSE	canonical	1	37	junction_2	25.1462389500564	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTATTCATTTTATGAAACT	-201781124	False	NA	-23	True	AATAAA	-2	NA	201781158	201733049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201733439_201738669_201738736_201741673_201741855_201744257_201744430_201746565_201746749_201749711_201749790_201753145_201753243_201754502_201754672_201757401_201757760_201760880_201761819_201767228_201767384_201768865_201768946_201780876
transcript_86241.known	chr2	-	491	4	FSM	ENSG00000003393.16	ENST00000462747.1	491	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	59.4100627466051	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTTGTTGTTTTCAATAA	-201778300	True	NA	NA	False	AATATA	-28	NA	201780911	201765382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201765604_201767228_201767384_201768865_201768946_201780876
transcript_86242.known	chr2	-	2677	4	FSM	ENSG00000003393.16	ENST00000467448.5	2677	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	10.6249183003395	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAATGTGTGTTTCTATTA	-201778345	True	NA	NA	False	ATTAAA	-16	NA	201780956	201759456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_201761819_201767228_201767384_201768865_201768946_201780876
transcript_86244.nnic	chr2	-	1994	2	NNC	ENSG00000003393.16	novel	559	5	NA	NA	0	-13190	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCTTGTTTCTTTTTCA	-201778340	True	NA	-19	True	AATAAA	-13	NA	201780951	201778572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_201780492_201780876
transcript_86245.nnic	chr2	-	745	2	NNC	ENSG00000003393.16	novel	559	5	NA	NA	40	-14606	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAGCAGGTACAAAACT	-201781084	False	65	-5	True	AATAAA	-18	NA	201781118	201779988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_201780492_201780876
transcript_86247.nnic	chr2	+	558	2	Genic_Genomic	ENSG00000289026.1	novel	767	1	NA	NA	-37	0	multi-exon	FALSE	canonical	3	14	junction_1	0	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAGGATCAAATGGTTGCT	202032024	False	NA	12	True	ATTAAA	-23	NA	202032034	202032838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_+_202032358_202032603
transcript_86249.known	chr2	-	768	1	FSM	ENSG00000273209.1	ENST00000608741.1	768	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	116	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCGGGGTTATCCTCGTT	-202033350	True	NA	-25	True	ATTAAA	-16	NA	202033537	202032769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202032800_202033500
transcript_8625.known	chr1	+	3728	18	FSM	ENSG00000116337.20	ENST00000342115.8	3728	18	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	27.3493356257433	47	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGGCAGGTGGGGTTTCTG	109617219	True	NA	15	True	AATAAA	-15	NA	109619836	109632051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109620279_109625302_109625434_109625661_109625793_109626159_109626229_109626318_109626428_109626725_109626913_109627174_109627317_109627428_109627519_109627773_109627904_109628082_109628278_109628363_109628496_109628642_109628807_109629108_109629236_109629326_109629491_109629795_109629917_109630232_109630407_109630682_109630794_109630942
transcript_86263.known	chr2	-	722	6	FSM	ENSG00000116030.17	ENST00000409627.6	722	6	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_4	2439.06421399684	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACATCTGGTAATTTGAAT	-202201169	True	NA	NA	False	NA	NA	NA	202238566	202207141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202231542_202231733_202238439
transcript_86280.known	chr2	-	831	4	FSM	ENSG00000116030.17	ENST00000392244.7	831	4	0	0	0	0	multi-exon	FALSE	canonical	3	1214	junction_3	1548.81230481797	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCAGGTTGAAGTCAAGA	-202201169	True	NA	NA	False	TTTAAA	-30	NA	202238566	202206767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214435_202238439
transcript_86284.known	chr2	-	1071	6	FSM	ENSG00000116030.17	ENST00000392245.5	1071	6	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_1	1922.20119654525	824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATTCTTACTGGATTTT	-202201202	True	NA	-17	True	AATAAA	-11	NA	202238599	202206186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202206804_202207252_202207322_202210734_202210807_202214356_202214435_202220031_202220107_202238439
transcript_86285.known	chr2	-	1187	6	FSM	ENSG00000116030.17	ENST00000409368.5	1187	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	2432.05126590703	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTCTAATTTTCATTAG	-202201197	True	NA	NA	False	AAGAAA	-45	NA	202238594	202206649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202207322_202207867_202208003_202210734_202210807_202214356_202214435_202220031_202220107_202238439
transcript_86286.known	chr2	-	534	5	FSM	ENSG00000116030.17	ENST00000409205.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_3	1824.88525324197	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATTACGTGTGCACAGA	-202201065	True	NA	NA	False	NA	NA	NA	202238462	202207030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202207322_202210734_202210807_202214356_202214430_202220031_202220107_202238439
transcript_86296.known	chr2	+	1994	15	FSM	ENSG00000055044.11	ENST00000264279.10	1994	15	0	0	0	0	multi-exon	FALSE	canonical	3	1102	junction_3	125.403023756794	3407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAATTTTGTGATCTCTTT	202247426	True	NA	18	True	AATAAA	-19	NA	202265762	202303661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284344_202284482_202287659_202287725_202290322_202290458_202291124_202291271_202292776_202292904_202295673_202295838_202297378_202297514_202297844_202297907_202300233_202300368_202302920_202303058_202303385
transcript_86297.known	chr2	+	582	5	FSM	ENSG00000055044.11	ENST00000472050.5	582	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	578.132770218053	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGAACCACGTGAAATGGC	202247428	True	NA	NA	False	NA	NA	NA	202265764	202284434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202265987_202275112_202275190_202277949_202278003_202282350_202282473_202284326
transcript_86298.known	chr2	-	673	1	FSM	ENSG00000273456.1	ENST00000607928.1	673	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCTGTTATACTAAAC	-202375589	False	NA	1	True	AATAAA	-18	NA	202375604	202374931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202374900_202375600
transcript_86299.known	chr2	+	5982	8	FSM	ENSG00000138439.12	ENST00000392238.3	5982	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	15.011560171265	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTTTCTGTGAATTTTT	202632850	True	NA	23	True	AATAAA	-16	NA	202634968	202769757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202635789_202695880_202696033_202724916_202725010_202726249_202726364_202755537_202755682_202757212_202757439_202759232_202759354_202765445
transcript_863.nnic	chr1	+	833	3	FSM	ENSG00000217801.11	ENST00000692821.1	722	3	-21	-90	-8	0	multi-exon	FALSE	canonical	2	6	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTTGTGCCTTCAGTCTC	1059429	True	NA	5	True	NA	NA	NA	1059678	1066441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1059783_1060276_1060394_1065829
transcript_86302.nic	chr2	-	807	5	ISM	ENSG00000163596.17	ENST00000358299.7	7961	13	2	46429	2	0	5prime_fragment	FALSE	canonical	2	9	junction_4	0.82915619758885	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTCATTATACATT	-202871730	False	34	NA	False	AATAAA	-23	NA	202871764	202819604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_202819900_202821357_202821482_202825694_202825768_202828847_202829017_202871618
transcript_86303.known	chr2	-	879	4	FSM	ENSG00000163596.17	ENST00000425178.5	879	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	0.471404520791032	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATGTTTCATTATACATT	NA	False	NA	NA	False	AATAAA	-23	NA	202829234	202819604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202819900_202821357_202821482_202825694_202825768_202828847
transcript_86304.known	chr2	-	8068	13	FSM	ENSG00000138442.11	ENST00000261015.5	8068	13	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_8	44.0331314655983	599	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTTTAAAGGTGTTAAAT	-202911650	False	NA	NA	False	AGTAAA	-25	NA	202911673	202874260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_202880938_202882710_202882784_202883608_202883742_202884197_202884304_202884394_202884536_202892616_202892703_202894580_202894627_202896064_202896220_202897299_202897416_202899530_202899638_202901024_202901120_202907864_202907960_202911435
transcript_86305.known	chr2	+	5938	16	FSM	ENSG00000138380.18	ENST00000402905.7	5938	16	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_8	2.98142396999972	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATTTTGGCCAGAGATTTA	NA	False	NA	NA	False	AATAAA	-16	NA	202912213	202987063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236_202961427_202966977_202967099_202969918_202970063_202971504_202971739_202974333_202974497_202977268_202977333_202981554_202981686_202982071_202982442_202983505
transcript_86309.known	chr2	+	2854	8	FSM	ENSG00000138380.18	ENST00000444724.5	2854	8	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	3.01695886884898	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAGCCGGGCGAGGTGGCGG	202911838	True	NA	NA	False	AATACA	-6	NA	202912254	202963168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_202912325_202917876_202918044_202941859_202941981_202942739_202942968_202952558_202952680_202954004_202954135_202955673_202955759_202961236
transcript_86314.nic	chr2	+	746	5	ISM	ENSG00000144426.19	ENST00000478884.5	1012	7	-76	5984	-17	0	5prime_fragment	FALSE	canonical	1	2	junction_4	4.32290411644765	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAAGTAGGTGTGAACTAAT	203013802	True	NA	-1	True	NA	NA	NA	203014848	203056504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_203014983_203016155_203016436_203041764_203041857_203049813_203049976_203056426
transcript_86318.known	chr2	+	521	3	FSM	ENSG00000144426.19	ENST00000683927.1	521	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	4.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTTGTGCTTTTCATTTT	203013832	True	NA	NA	False	AATAAA	-13	NA	203014878	203016735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203014983_203016155_203016436_203016598
transcript_8632.known	chr1	+	1394	8	FSM	ENSG00000168765.18	ENST00000369836.9	1394	8	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	11.5511285781335	443	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	109655449	True	NA	13	True	AATAAA	-13	NA	109656098	109661700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_86323.known	chr2	+	498	1	FSM	ENSG00000204196.5	ENST00000431098.1	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	123	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	203190016	False	NA	-24	True	NA	NA	NA	203190779	203191277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203190800_203191300
transcript_86325.known	chr2	+	10552	13	FSM	ENSG00000119004.17	ENST00000356079.9	10552	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_3	29.698484809835	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAGTAGTCATTTGTTCCT	203237128	True	NA	15	True	AATATA	-35	NA	203239017	203306026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_8633.known	chr1	+	1321	8	FSM	ENSG00000168765.18	ENST00000326729.9	1321	8	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_7	51.4805293092367	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTATCTTAGTGGTGTC	109655472	True	NA	3	True	AATAAA	-17	NA	109656121	109665496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109665010
transcript_86330.known	chr2	+	1730	12	FSM	ENSG00000119004.17	ENST00000449301.5	1730	12	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	46.5946118262581	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGGGGAATCATGTTTGTT	203237087	True	NA	17	True	AAAAAG	-17	NA	203238976	203297242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_86332.known	chr2	+	2636	12	FSM	ENSG00000119004.17	ENST00000431118.5	2636	12	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	46.8350366836306	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGAGGTGGGAGGATCACTT	203237137	True	NA	NA	False	NA	NA	NA	203239026	203298286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_86334.known	chr2	+	1359	11	FSM	ENSG00000119004.17	ENST00000461371.5	1359	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	42.8164687941451	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTATTTGTACTTAATTT	203237092	True	NA	4	True	TATAAA	-24	NA	203238981	203297014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_86341.known	chr2	+	1986	14	NNC	ENSG00000119004.17	novel	10552	13	NA	NA	-2	-415	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_13	47.6041368596664	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGTGATTTTTAGAAAAA	203237119	True	NA	18	True	AATAAA	-15	NA	203239008	203305611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272669_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757_203297289_203305448
transcript_86342.known	chr2	+	1812	13	FSM	ENSG00000119004.17	ENST00000429815.6	1812	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	49.251903516514	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTATTTTGCAGAAGTTG	203237092	True	NA	1	True	AAAAAG	-1	NA	203238981	203297226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203239135_203245845_203245896_203246754_203246922_203251966_203252110_203266513_203266682_203272645_203272749_203278572_203278689_203280058_203280114_203285611_203285733_203289764_203289877_203292261_203292327_203296473_203296564_203296757
transcript_86345.known	chr2	+	6567	12	FSM	ENSG00000138443.17	ENST00000261018.12	6567	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	168.199458534324	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGGTGTCTTGTTAACTT	203317231	True	NA	15	True	AATAAA	-16	NA	203328393	203432169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203382188_203382207_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_86349.nic	chr2	+	1946	11	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	35	junction_2	156.433244548593	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	203317127	True	NA	-12	True	NA	NA	NA	203328289	203427569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_203328632_203366876_203367045_203376056_203376133_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_86353.known	chr2	+	2240	10	FSM	ENSG00000138443.17	ENST00000424558.5	2240	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_6	161.901204442709	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTGCATCCCTTCATGT	203317232	True	NA	NA	False	NA	NA	NA	203328394	203427948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203396784_203396968_203402575_203402735_203416907_203417082_203427176
transcript_86354.known	chr2	+	6484	10	FSM	ENSG00000138443.17	ENST00000261017.9	6484	10	0	0	0	0	multi-exon	TRUE	canonical	3	213	junction_8	87.5468128742814	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTCTTGTTAACTTATTT	203317117	True	NA	19	True	AATAAA	-20	NA	203328279	203432173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203411284_203411372_203416907_203417082_203427176
transcript_8636.known	chr1	+	1159	7	FSM	ENSG00000168765.18	ENST00000495742.5	1159	7	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	56.7090527752551	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCTATAGTCTTGTCTTA	109655602	False	NA	13	True	AATAAA	-13	NA	109656251	109661700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771_109657873_109658813_109658910_109658999_109659111_109661164
transcript_86360.nic	chr2	+	1783	9	NIC	ENSG00000138443.17	novel	6484	10	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	194	junction_7	85.5537111994564	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GATTGAAATAAAATGACCAT	203317127	True	NA	-12	True	NA	NA	NA	203328289	203427569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_203328632_203366876_203367045_203380207_203380385_203391045_203391144_203394699_203394847_203395655_203395781_203402575_203402735_203416907_203417082_203427176
transcript_86374.known	chr2	+	717	2	FSM	ENSG00000138443.17	ENST00000494215.1	717	2	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTAGGATTTATGTTTACTG	203317295	False	NA	NA	False	GATAAA	-43	NA	203328457	203367419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_203328632_203366876
transcript_86378.nic	chr2	+	1118	3	ISM	ENSG00000118257.17	ENST00000417189.5	2386	10	-80	45789	-73	0	5prime_fragment	FALSE	canonical	1	13	junction_1	31.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTATGGTGGAAAGAGCC	205680744	True	NA	6	True	AATAAA	-16	NA	205682426	205697909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_205682906_205683090_205683364_205697543
transcript_86382.known	chr2	+	1072	2	FSM	ENSG00000118257.17	ENST00000478013.1	1072	2	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACAGTATGGTGGAAAGAGCC	205680975	False	NA	6	True	AATAAA	-16	NA	205682657	205697909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_205683364_205697543
transcript_86389.known	chr2	+	752	2	FSM	ENSG00000227946.2	ENST00000420509.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGATATTTTAATATTTTTTT	206084432	True	NA	NA	False	NA	NA	NA	206084604	206086564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206084749_206085956
transcript_86391.known	chr2	-	14128	11	FSM	ENSG00000114933.16	ENST00000403263.6	14128	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	5.33010318849457	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGTTTTTAGTTTAATT	-206085876	True	NA	-2	True	AATAAA	-16	NA	206086174	205993720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206005534_206007283_206007442_206009576_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206063046_206063150_206063245_206085900
transcript_86392.known	chr2	-	1664	8	FSM	ENSG00000114933.16	ENST00000424117.5	1664	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	6.0911444586651	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAACACAAGAAGAAGAG	-206063228	True	NA	NA	False	NA	NA	NA	206063244	206009704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206009795_206017679_206017814_206019735_206019846_206028110_206028336_206046503_206046613_206056197_206056944_206062798_206062955_206063150
transcript_86393.known	chr2	-	11660	19	FSM	ENSG00000023228.14	ENST00000233190.11	11660	19	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_16	51.8169856321265	501	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCCTGGATCAATTAACATG	-206148614	True	NA	-16	True	AATAAA	-17	NA	206159444	206114816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206152418_206152511_206153617_206153683_206159340
transcript_86395.known	chr2	-	2631	18	FSM	ENSG00000023228.14	ENST00000423725.5	2631	18	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_16	117.161645648534	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAGAAAAGATTTAAGCACC	-206148679	True	NA	-19	True	ATTAAA	-21	NA	206159509	206123818	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206124277_206126538_206126612_206126709_206126845_206127796_206127973_206130087_206130243_206132944_206133106_206138484_206138615_206141940_206142070_206142685_206142832_206144017_206144133_206144891_206145027_206146902_206147089_206147530_206147662_206147752_206147835_206149019_206149097_206149817_206149926_206153617_206153683_206159340
transcript_86416.known	chr2	+	880	7	FSM	ENSG00000114942.14	ENST00000392221.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	1381.82857917407	5378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGGCTCTTGAGTATG	206145850	True	NA	28	True	AATAAA	-14	NA	206159593	206162927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_86430.known	chr2	+	808	6	FSM	ENSG00000114942.14	ENST00000392222.7	808	6	0	0	0	0	multi-exon	FALSE	canonical	3	3767	junction_2	219.069304102606	22041	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206145467	True	NA	29	True	AATAAA	-15	NA	206159894	206162928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_86431.known	chr2	+	844	7	FSM	ENSG00000114942.14	ENST00000236957.9	844	7	0	0	0	0	multi-exon	FALSE	canonical	3	945	junction_1	1181.22315372197	12666	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGGCTCTTGAGTATGT	206159566	False	NA	29	True	AATAAA	-15	NA	206159584	206162928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159958_206160060_206160587_206160711_206161345_206161473_206162037_206162105_206162488_206162615_206162728
transcript_86432.known	chr2	+	515	5	FSM	ENSG00000114942.14	ENST00000445505.5	515	5	0	0	0	0	multi-exon	FALSE	canonical	3	400	junction_1	1536.3668995393	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CACAATATGAATCAAAGAAA	206145863	True	NA	NA	False	NA	NA	NA	206159606	206162077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206159685_206159912_206160060_206160587_206160711_206161345_206161473_206162037
transcript_86435.known	chr2	+	6334	26	FSM	ENSG00000114948.13	ENST00000264377.8	6334	26	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_24	14.7586449242469	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTTGTAGCTTTATGCT	206442133	True	NA	13	True	ATTAAA	-16	NA	206443531	206621127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206444081_206445306_206445525_206481231_206481309_206530884_206530949_206542051_206542135_206543252_206543317_206547428_206547502_206548280_206548355_206550094_206550161_206557426_206557499_206559954_206560119_206561127_206561213_206562202_206562294_206565019_206565069_206567222_206567323_206570739_206570812_206571726_206571817_206573114_206573196_206587324_206587376_206588090_206588155_206589408_206589515_206592616_206592737_206594736_206594906_206596050_206596163_206609909_206610001_206617578
transcript_86436.known	chr2	-	1757	11	FSM	ENSG00000138400.13	ENST00000449792.5	1757	11	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_7	5.14684369298311	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTACATTAAAATAGAGTT	-206764957	True	NA	NA	False	NA	NA	NA	206765326	206738224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206738512_206739592_206739662_206741053_206741105_206745621_206745674_206746286_206746427_206749019_206749184_206750933_206751076_206755008_206755506_206756897_206757041_206757236_206757372_206765249
transcript_86443.nic	chr2	-	1721	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-254	16210	-212	2152	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGGATTATGATATCT	NA	False	NA	NA	False	AATAAA	-24	NA	206765540	206754466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_86444.nic	chr2	-	1416	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-254	16515	-212	1847	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	NA	False	NA	-16	True	AATAAA	-18	NA	206765540	206754771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_86445.nic	chr2	-	1117	5	ISM	ENSG00000138400.13	ENST00000454776.6	1795	12	-42	16602	0	1760	5prime_fragment	FALSE	canonical	3	9	junction_4	4.02336923485777	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACTGTGCAAACATTTTTT	-206764959	True	NA	1	True	TATAAA	-32	NA	206765328	206754858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206760900_206761014_206765249
transcript_86446.nic	chr2	-	1410	4	ISM	ENSG00000138400.13	ENST00000449792.5	1757	11	-16	16242	-14	2152	5prime_fragment	FALSE	canonical	3	10	junction_3	4.18993502999218	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAATAGGATTATGATATCT	-206764973	True	NA	NA	False	AATAAA	-24	NA	206765342	206754466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206765249
transcript_86447.nic	chr2	-	1105	4	ISM	ENSG00000138400.13	ENST00000449792.5	1757	11	-16	16547	-14	1847	5prime_fragment	FALSE	canonical	3	10	junction_3	4.18993502999218	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATATTATTCAGGTGATA	-206764973	True	NA	-16	True	AATAAA	-18	NA	206765342	206754771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_206755506_206756897_206757041_206757236_206757372_206765249
transcript_86449.known	chr2	-	722	4	FSM	ENSG00000138400.13	ENST00000471988.1	722	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	4.49691252107735	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCTGACTGTTGCTCTCT	-206764932	True	NA	NA	False	AAAACA	-35	NA	206765301	206756618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_206757041_206757236_206757372_206760900_206761014_206765249
transcript_86450.known	chr2	+	3188	12	FSM	ENSG00000118246.14	ENST00000236980.10	3188	12	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_1	73.6063912065133	148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCTGAGGACTATTTTTTC	NA	False	NA	24	True	ATTAAA	-28	NA	206765356	206792509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206765655_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_86456.known	chr2	+	2344	12	FSM	ENSG00000118246.14	ENST00000403094.3	2344	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	118.789417120528	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAATCAACCTTTTCATATT	206760663	True	NA	-7	True	AATAAA	-4	NA	206765605	206791806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_206765763_206766643_206767471_206770090_206770195_206771181_206771291_206771893_206772018_206772180_206772321_206774224_206774398_206786732_206786900_206787936_206788156_206788818_206788904_206790571_206790687_206791682
transcript_8646.known	chr1	+	646	4	FSM	ENSG00000168765.18	ENST00000479578.5	646	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_3	72.3202753190433	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGTTCCCTGTACTGTAGCA	109655471	True	NA	NA	False	NA	NA	NA	109656120	109657971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657771
transcript_8648.known	chr1	+	1166	8	FSM	ENSG00000213366.13	ENST00000241337.9	1166	8	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_5	7.23088613419644	243	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTGTGTCTTGTCTT	109667408	True	NA	NA	False	AGTAAA	-13	NA	109668056	109675286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109668152_109668424_109668501_109668924_109668990_109669289_109669372_109669470_109669572_109671286_109671383_109671472_109671584_109674746
transcript_86480.nnic	chr2	-	837	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	19	junction_2	19	139	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-206812377	False	NA	2	True	AATAAA	-22	NA	206812400	206806875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_206807239_206810036_206810139_206812028
transcript_86483.nnic	chr2	-	824	3	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	14	junction_2	21.5	124	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-206812307	False	NA	2	True	AATAAA	-22	NA	206812330	206806875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_206807239_206810036_206810196_206812028
transcript_86486.nnic	chr2	-	684	2	Antisense	novelGene_ENSG00000229321.2_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	77	junction_1	0	627	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-206812326	False	NA	2	True	AATAAA	-22	NA	206812349	206806875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_206807239_206812028
transcript_8649.known	chr1	+	657	8	FSM	ENSG00000168765.18	ENST00000336075.6	657	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_7	39.2163023160897	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTTGAAGGCCAGGAGGT	109655580	False	NA	NA	False	NA	NA	NA	109656389	109674836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109656426_109656711_109656788_109657214_109657280_109657589_109657672_109657771_109657873_109658813_109658910_109658999_109659111_109674746
transcript_865.known	chr1	+	540	2	FSM	ENSG00000217801.11	ENST00000433695.1	540	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTATACCTGCCGGTTATTC	1064245	False	NA	-66	True	NA	NA	NA	1064494	1066274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1064590_1065829
transcript_8650.known	chr1	+	1561	8	FSM	ENSG00000134201.12	ENST00000256593.8	1561	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	9.53832227578491	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCATGGTACTTGTTTTTCAC	NA	False	NA	NA	False	AATAAA	-22	NA	109712250	109718268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109712349_109712617_109712694_109713118_109713184_109713483_109713566_109713660_109713762_109714946_109715043_109715129_109715241_109717336
transcript_86509.known	chr2	-	8365	4	FSM	ENSG00000118263.15	ENST00000309446.11	8365	4	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	1.88561808316413	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCGTGGCTAGTGTGACTGAA	-207165373	True	NA	NA	False	AATAAA	-16	NA	207165948	207074136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207081265_207088457_207088582_207123773_207124405_207165466
transcript_8651.known	chr1	-	4046	8	FSM	ENSG00000134202.12	ENST00000256594.7	4046	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_2	6.92820323027551	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTCCATGTGCCTAATTT	NA	False	NA	NA	False	AATAAA	-25	NA	109740516	109733931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109739832_109739909_109740239
transcript_86529.known	chr2	+	7650	9	FSM	ENSG00000118260.15	ENST00000432329.6	7650	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_4	53.7864701853542	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAAGTCTCTTTTTTGGGG	207520014	True	NA	10	True	CATAAA	-18	NA	207529891	207603431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_8654.known	chr1	-	783	7	FSM	ENSG00000134202.12	ENST00000486823.5	783	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	14.476033833739	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGGATATGTGGAGAATC	-109740041	False	NA	39	True	TATAAA	-13	NA	109740327	109736929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_109737170_109737456_109737568_109737655_109737752_109738090_109738192_109738284_109738367_109739428_109739494_109740239
transcript_86540.known	chr2	+	2005	8	FSM	ENSG00000118260.15	ENST00000430624.5	2005	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	68.463605704947	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGACAAAGCATGGTATT	207529719	False	NA	NA	False	ATTAAA	-15	NA	207529736	207597789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_86548.known	chr2	+	10095	8	FSM	ENSG00000118260.15	ENST00000353267.8	10095	8	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_3	33.5577479724071	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTCATAAGGCTTTCCTTT	207520084	True	NA	NA	False	ATTAAA	-18	NA	207529961	207605988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530135_207555627_207555750_207560225_207560373_207567462_207567564_207570178_207570322_207575271_207575455_207577504_207577656_207596913
transcript_86562.known	chr2	+	651	6	FSM	ENSG00000118260.15	ENST00000445803.5	651	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	69.45790091847	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTGAGTAATAGACAATTTCT	207520045	True	NA	NA	False	NA	NA	NA	207529922	207570321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207530019_207555627_207555750_207560225_207560373_207561118_207561161_207567462_207567564_207570178
transcript_86568.known	chr2	-	869	5	FSM	ENSG00000144401.14	ENST00000432416.5	869	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	272.649385658578	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTTGGATTACAATCTTT	-207625073	False	NA	-1	True	AATAAA	-23	NA	207625121	207580630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207580999_207581793_207581947_207621805_207621918_207624228_207624405_207625061
transcript_86577.known	chr2	-	1366	4	FSM	ENSG00000144401.14	ENST00000458426.5	1366	4	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	282.62735575705	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCTAGTTGTATATAGTTG	-207618678	True	NA	0	True	AATAAA	-24	NA	207625331	207581352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207582161_207621805_207621918_207624228_207624405_207625061
transcript_8658.known	chr1	+	3943	17	FSM	ENSG00000168710.18	ENST00000369799.10	3943	17	0	0	0	0	multi-exon	FALSE	canonical	3	745	junction_1	35.8808248755516	217	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGGCAGTCCGTATGTGTCA	109971297	True	NA	24	True	ATTAAA	-25	NA	109984764	110023742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_109985173_110009033_110009146_110011213_110011358_110012361_110012463_110012896_110013000_110014762_110014858_110015424_110015532_110016343_110016461_110016666_110016731_110017494_110017584_110017945_110018017_110018372_110018468_110018551_110018651_110019050_110019120_110019547_110019627_110020730_110020852_110021673
transcript_86585.known	chr2	-	4805	4	FSM	ENSG00000144401.14	ENST00000411432.5	4805	4	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	247.242121546201	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGCATTCTGTGATATAC	-207625201	False	NA	-6	True	AATAAA	-16	NA	207625249	207609114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625061
transcript_86586.known	chr2	-	1003	4	FSM	ENSG00000144401.14	ENST00000442521.1	1003	4	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_3	292.896265292377	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATATTTAATGAAATGTCT	-207625788	True	NA	NA	False	NA	NA	NA	207625927	207612979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625676
transcript_86595.known	chr2	-	1103	4	FSM	ENSG00000144401.14	ENST00000406927.6	1103	4	0	0	0	0	multi-exon	FALSE	canonical	3	487	junction_3	84.0991478355558	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAGGGCCGGTATAAAGAA	-207618725	True	NA	-31	True	AATAAA	-19	NA	207625378	207612742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207621805_207621918_207624228_207624405_207625264
transcript_86596.known	chr2	-	869	2	FSM	ENSG00000144401.14	ENST00000448823.2	869	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAGTCTTTAAATGAGTAA	-207624332	False	80	-15	True	AATAAA	-35	NA	207624380	207612726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207613444_207624228
transcript_86597.known	chr2	+	3813	10	FSM	ENSG00000163249.13	ENST00000295414.8	3813	10	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_3	22.7259573132238	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGCTAGTGTGTTTGTAA	207708350	True	NA	NA	False	AATAAA	-18	NA	207711639	207756174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_866.nnic	chr1	-	240	2	Antisense	novelGene_ENSG00000217801.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTCTTTGTCTTGTGTCTTT	NA	False	NA	1	True	NA	NA	NA	1069347	1065634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_1065834_1069306
transcript_8660.known	chr1	+	4216	1	FSM	ENSG00000258634.3	ENST00000554749.1	4216	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCTGCTTTCCAGGGATAT	110058329	False	NA	NA	False	AATAAA	-19	NA	110058339	110062555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110058300_110062600
transcript_86601.known	chr2	+	2124	9	FSM	ENSG00000163249.13	ENST00000650811.1	2124	9	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	43.1827511860928	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCTAGCCTCAGCCACAC	207711769	False	NA	NA	False	NA	NA	NA	207711795	207754742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_86602.known	chr2	+	2619	8	FSM	ENSG00000163249.13	ENST00000339882.9	2619	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	60.6498818075131	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCATGTGTCTGTAGTCCC	207711724	False	NA	NA	False	AATAAA	-16	NA	207711750	207755244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207742222_207742343_207747046_207747214_207750956_207751120_207753587
transcript_86606.nic	chr2	+	821	7	ISM	ENSG00000163249.13	ENST00000392209.7	1952	11	271	12027	15	-8676	internal_fragment	FALSE	canonical	3	122	junction_3	10.6614570611463	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCAGAACTTTAAGAGAAA	207711784	False	NA	NA	False	AATAAA	-20	NA	207711810	207742438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_207712117_207724799_207724875_207726841_207726877_207733946_207734048_207737410_207737447_207740654_207740707_207742222
transcript_86610.nic	chr2	+	720	6	ISM	ENSG00000163249.13	ENST00000650811.1	2124	9	15	12304	15	-8676	5prime_fragment	FALSE	canonical	3	44	junction_3	41.2281457259479	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CATCAGAACTTTAAGAGAAA	207711784	False	NA	NA	False	AATAAA	-20	NA	207711810	207742438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_207712117_207724799_207724875_207726841_207726877_207737410_207737447_207740654_207740707_207742222
transcript_86613.known	chr2	-	564	1	FSM	ENSG00000272851.1	ENST00000609146.1	564	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	9	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCATTCTTTCCTGTGG	-207754412	False	NA	-5	True	ATTAAA	-33	NA	207754435	207753871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_207753900_207754400
transcript_86617.nnic	chr2	-	992	3	FSM	ENSG00000229150.2	ENST00000440809.2	621	3	-371	0	-371	0	multi-exon	TRUE	canonical	3	27	junction_2	12	282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	-208112993	False	NA	-6	True	AATAAA	-24	NA	208113023	208108157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208108497_208112265_208112509_208112613
transcript_86618.nnic	chr2	-	752	3	NNC	ENSG00000229150.2	novel	621	3	NA	NA	-482	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	24	267	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	-208113104	False	NA	-6	True	AATAAA	-24	NA	208113134	208108157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_208108497_208112265_208112509_208112964
transcript_86619.nnic	chr2	-	628	3	NNC	ENSG00000229150.2	novel	621	3	NA	NA	-482	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	25.5	281	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTATCCTCTGTTCCT	-208113104	False	NA	-6	True	AATAAA	-24	NA	208113134	208108157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_208108497_208112265_208112509_208113088
transcript_86620.known	chr2	-	423	2	FSM	ENSG00000229150.2	ENST00000689457.1	729	2	143	163	3	-84	multi-exon	FALSE	canonical	3	51	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGAGGCCGGGGGACTG	-208112478	False	NA	NA	False	NA	NA	NA	208112508	208108316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208108497_208112265
transcript_86621.known	chr2	-	528	2	FSM	ENSG00000229150.2	ENST00000412192.1	528	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTACTGAAATGTTTGTAC	-208112481	False	NA	-81	True	NA	NA	NA	208112511	208108232	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208108515_208112265
transcript_86624.known	chr2	-	642	3	FSM	ENSG00000118231.5	ENST00000264376.5	642	3	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_2	22.5	313	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGATTTGCTTGTGTCTTTC	-208124226	True	NA	-3	True	AATAAA	-24	NA	208124524	208121606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208121946_208124111_208124355_208124464
transcript_86626.known	chr2	-	631	3	FSM	ENSG00000182187.4	ENST00000260988.5	631	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	0.5	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAGTAGAGCCCTGTCTTTC	-208146095	True	NA	-2	True	AATAAA	-24	NA	208146158	208142572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208142914_208145773_208146017_208146111
transcript_86628.known	chr2	-	1195	9	FSM	ENSG00000188674.11	ENST00000341287.9	1195	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	1.85404962177392	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACAGGCTTTCTCTCAGTAG	-208190020	False	NA	NA	False	AATAAA	-17	NA	208190030	208165346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208165816_208170944_208171064_208171987_208172076_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945_208187062_208189952
transcript_86631.known	chr2	-	722	6	FSM	ENSG00000188674.11	ENST00000453017.5	722	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.93907194296653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGATGGAGTGGGAGGCAG	-208186936	True	NA	NA	False	NA	NA	NA	208187004	208165477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208165816_208180744_208180817_208181217_208181306_208182964_208183048_208184950_208185033_208186945
transcript_86634.known	chr2	-	2298	10	FSM	ENSG00000138413.14	ENST00000446179.5	2298	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_9	1617.52815534486	503	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATTCTTCTGCGTTTCTGT	-208254439	False	NA	-9	True	ATTAAA	-16	NA	208254458	208236231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254342
transcript_86640.known	chr2	+	489	2	FSM	ENSG00000231908.2	ENST00000448588.1	489	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTGTAGGACAATAGCATG	208254972	False	NA	13	True	AATAAA	-18	NA	208255399	208256168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_208255623_208255902
transcript_86641.known	chr2	-	2318	10	FSM	ENSG00000138413.14	ENST00000345146.7	2318	10	0	0	0	0	multi-exon	FALSE	canonical	3	4389	junction_1	459.440239131634	5660	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTCTGCGTTTCTGTTTA	-208197551	True	NA	-6	True	ATTAAA	-19	NA	208255071	208236228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254938
transcript_86642.known	chr2	-	2441	10	FSM	ENSG00000138413.14	ENST00000415913.5	2441	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_9	1620.24339735321	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTTGATTTTAATTAAAAT	-208254303	False	NA	-5	True	ATTAAA	-23	NA	208254322	208236264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208237170_208239070_208239234_208239862_208240004_208241993_208242146_208243426_208243605_208245318_208245425_208248368_208248661_208251429_208251568_208253885_208253960_208254030
transcript_86643.known	chr2	-	556	3	FSM	ENSG00000138413.14	ENST00000481557.1	556	3	0	0	0	0	multi-exon	FALSE	canonical	3	4760	junction_2	334	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAGGAAAAAAAAGGGA	-208197593	True	NA	NA	False	TTTAAA	-2	NA	208255113	208251260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_208251568_208253885_208253960_208254938
transcript_86644.known	chr2	+	464	2	FSM	ENSG00000231908.2	ENST00000440574.2	497	2	33	0	33	0	multi-exon	FALSE	canonical	3	99	junction_1	0	624	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCATGCTTGTATATTGCT	208254819	True	NA	26	True	AATAAA	-31	NA	208255246	208256181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_208255432_208255902
transcript_86646.known	chr2	+	633	2	FSM	ENSG00000232799.1	ENST00000418459.1	633	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATATTTGTACTCTATCCTT	NA	False	NA	NA	False	NA	NA	NA	209145240	209147687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_209145602_209147415
transcript_8665.nnic	chr1	-	662	4	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	-4	-23240	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_3	7.78888096369861	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGATAATGGCTGGGTTT	-110338854	True	NA	-4	True	AATACA	-22	NA	110339175	110315499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_110315752_110318764_110318883_110331033_110331147_110338996
transcript_8666.nnic	chr1	-	1049	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	-35	-22771	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAGCGTTCAGAATTGCATC	NA	False	NA	-8	True	ATTAAA	-15	NA	110339206	110315030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_110315752_110318764_110318883_110338996
transcript_86663.known	chr2	+	1128	7	FSM	ENSG00000197713.15	ENST00000436630.6	1128	7	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_3	248.276335740821	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGGCATATTAGCTACACTA	209993471	True	NA	NA	False	NA	NA	NA	210002583	210020100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_86668.known	chr2	+	925	7	FSM	ENSG00000197713.15	ENST00000429907.5	925	7	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_5	276.614452904319	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTAAGAGGTCAGAAATTG	209993529	True	NA	8	True	ATTAAA	-18	NA	210002641	210019940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210018152_210018222_210019668
transcript_8667.known	chr1	+	3284	3	FSM	ENSG00000162775.17	ENST00000617047.1	3284	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	7	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	110334021	True	NA	22	True	AATAAA	-20	NA	110339465	110346677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110342269_110345538_110345650_110346307
transcript_86682.known	chr2	+	858	6	FSM	ENSG00000197713.15	ENST00000435437.2	858	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_5	239.187457865165	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993544	True	NA	29	True	ATTAAA	-39	NA	210002656	210019961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210009656_210009737_210015972_210016113_210016506_210016642_210017472_210017560_210019672
transcript_86687.known	chr2	+	792	6	FSM	ENSG00000197713.15	ENST00000411934.6	792	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	306.589888939606	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993543	True	NA	29	True	ATTAAA	-39	NA	210002655	210019961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002773_210003437_210003458_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_86693.known	chr2	+	2130	6	FSM	ENSG00000197713.15	ENST00000454822.5	2130	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	275.29402463548	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGACTTCTTGAGGCTACTAT	209993515	True	NA	NA	False	AATAAA	-17	NA	210002627	210021226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_86696.known	chr2	+	426	5	FSM	ENSG00000197713.15	ENST00000438191.1	426	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	302.080287340965	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATCAGATAGATATGGCC	209993537	True	NA	NA	False	NA	NA	NA	210002649	210016558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002773_210003437_210003469_210009656_210009737_210015972_210016113_210016506
transcript_86699.known	chr2	+	796	5	FSM	ENSG00000197713.15	ENST00000438204.6	796	5	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	255.417672646197	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTATAACTACATTTTTA	209993530	True	NA	29	True	ATTAAA	-39	NA	210002642	210019961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210015972_210016113_210016506_210016642_210017472_210017560_210019668
transcript_8670.nnic	chr1	-	580	3	NNC	ENSG00000227963.2	novel	2611	4	NA	NA	-35	-23240	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	1.5	63	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGGATAATGGCTGGGTTT	NA	False	NA	-4	True	AATACA	-22	NA	110339206	110315499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_110315752_110318764_110318883_110338996
transcript_86704.known	chr2	+	2511	7	FSM	ENSG00000197713.15	ENST00000429921.5	2511	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	273.376876612977	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTGTCAGTATTGAATTGA	209993515	True	NA	21	True	AATAAA	-25	NA	210002627	210021576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210002784_210003437_210003469_210015972_210016113_210016203_210016258_210016506_210016642_210017472_210017560_210019668
transcript_86705.known	chr2	+	740	1	FSM	ENSG00000272807.1	ENST00000608095.1	740	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACAATCTCTTGGTAGATG	210028400	False	NA	8	True	AATAAA	-26	NA	210028416	210029156	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_210028400_210029200
transcript_86706.known	chr2	-	2515	11	FSM	ENSG00000115361.8	ENST00000233710.4	2515	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1.28452325786651	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTTTAACATGGAAACAGAT	-210225419	True	NA	NA	False	AATAAA	-17	NA	210225447	210187922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210189055_210192803_210192891_210195210_210195339_210203330_210203445_210204580_210204683_210205631_210205797_210210195_210210263_210216346_210216512_210217964_210218103_210220646_210220803_210225186
transcript_86707.known	chr2	-	870	7	FSM	ENSG00000168530.16	ENST00000341685.8	870	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTCAAGTCACATTGCATT	NA	False	NA	NA	False	AATAAA	-29	NA	210303629	210290149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210290468_210291031_210291075_210293722_210293801_210294244_210294419_210298419_210298564_210302767_210302793_210303541
transcript_86708.known	chr2	-	4592	10	FSM	ENSG00000115365.12	ENST00000450366.7	4592	10	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	39.7690865737897	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCATCATGTGCTTTTTGT	-210471825	True	NA	-7	True	AATAAA	-18	NA	210476759	210431250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476619
transcript_86709.known	chr2	-	1270	10	FSM	ENSG00000115365.12	ENST00000431941.6	1270	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	87.1020403440629	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGGATAGCATGCCACCTGC	-210476396	False	NA	NA	False	NA	NA	NA	210476775	210434486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476721
transcript_8671.known	chr1	+	3214	2	FSM	ENSG00000162775.17	ENST00000654015.1	3214	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTTTCTGCCTGGAAGTG	110333980	True	NA	22	True	AATAAA	-20	NA	110339424	110346677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110342269_110346307
transcript_86721.known	chr2	-	4503	10	FSM	ENSG00000115365.12	ENST00000441020.7	4503	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.1243316706434	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATCATGTGCTTTTTGTTT	-210471823	True	NA	-5	True	AATAAA	-20	NA	210476757	210431248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476708
transcript_86722.known	chr2	-	1647	10	FSM	ENSG00000115365.12	ENST00000233714.8	1647	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	97.1243316706434	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATGTGACTATTATTGGGTA	-210471771	True	NA	NA	False	GATAAA	-7	NA	210476705	210434114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_210434564_210435386_210435460_210436215_210436393_210437689_210437873_210440597_210440745_210441307_210441444_210455106_210455315_210471958_210472077_210476315_210476413_210476646
transcript_86725.known	chr2	+	1250	5	FSM	ENSG00000144451.20	ENST00000432529.6	1250	5	0	0	0	0	multi-exon	TRUE	canonical	3	314	junction_3	27.0774352552083	2202	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATACTGTTTTCCAT	213279680	True	NA	37	True	AATAAA	-21	NA	213284391	213317978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_213284620_213296063_213296111_213297261_213297358_213310058_213310178_213317218
transcript_86728.known	chr2	-	5478	11	FSM	ENSG00000138376.11	ENST00000260947.9	5478	11	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_7	22.0320221495894	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCGTTTAAGAGCTGTAA	-214805375	True	NA	-9	True	AATAAA	-18	NA	214809683	214725645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214792296_214792446_214797060_214797118_214809411
transcript_86730.known	chr2	-	2261	10	FSM	ENSG00000138376.11	ENST00000455743.5	2261	10	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_8	53.3252308660129	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGAGTTGCTTCCTCTTG	-214805365	True	NA	NA	False	NA	NA	NA	214809673	214728703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780559_214781510_214797060_214797118_214809411
transcript_86731.known	chr2	-	1456	10	FSM	ENSG00000138376.11	ENST00000620057.4	1456	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	52.3810822509213	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATATTATACCAGATGAACA	-214805334	True	NA	-118	True	NA	NA	NA	214809642	214728676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214792296_214792446_214797060_214797118_214809411
transcript_86733.known	chr2	-	1010	7	FSM	ENSG00000138376.11	ENST00000421162.2	1010	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	65.2422834943379	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATACCAGATGAACATT	-214809575	False	NA	-116	True	NA	NA	NA	214809597	214728674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214797060_214797118_214809411
transcript_86735.known	chr2	-	1111	6	FSM	ENSG00000138376.11	ENST00000613374.5	1111	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	69.2028901130581	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTTTGAATCAAAAAAAAAAA	-214805334	True	NA	-3	True	NA	NA	NA	214809642	214728561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214809411
transcript_86736.known	chr2	-	946	5	FSM	ENSG00000138376.11	ENST00000619009.5	946	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	70.3753330365122	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAAAGTCTA	-214809575	False	NA	6	True	NA	NA	NA	214809597	214728552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214792296_214792446_214797060_214797118_214809411
transcript_86737.nic	chr2	-	790	4	ISM	ENSG00000138376.11	ENST00000613706.5	2131	11	-48	52661	-48	-349	5prime_fragment	FALSE	canonical	3	131	junction_1	19.7989898732233	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAGCTGAAATCAACCAA	-214809709	False	NA	NA	False	AAAAAG	-38	NA	214809731	214781245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_214781510_214792296_214792446_214797060_214797118_214809411
transcript_86738.known	chr2	-	703	3	FSM	ENSG00000138376.11	ENST00000613192.2	703	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	76.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATATTATACCAGATGAACAT	-214805375	True	NA	-117	True	NA	NA	NA	214809683	214728675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214809411
transcript_86739.nic	chr2	-	641	3	ISM	ENSG00000138376.11	ENST00000455743.5	2261	10	-58	52542	-48	-349	5prime_fragment	FALSE	canonical	2	5	junction_1	87	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTAGCTGAAATCAACCAA	-214809709	False	NA	NA	False	AAAAAG	-38	NA	214809731	214781245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_214781510_214797060_214797118_214809411
transcript_86740.known	chr2	-	872	2	FSM	ENSG00000138376.11	ENST00000471787.1	872	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGACTTTCCAGTCCCATTT	-214805362	True	NA	NA	False	AAGAAA	-42	NA	214809670	214780896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214781510_214809411
transcript_86741.known	chr2	-	2131	11	FSM	ENSG00000138376.11	ENST00000613706.5	2131	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_7	51.0121554141756	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTAGAGTCATTCATATT	-214805375	True	NA	-26	True	NA	NA	NA	214809683	214728584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_214729009_214730410_214730509_214745066_214745160_214745721_214745855_214752446_214752556_214767481_214767655_214769231_214769313_214780967_214781510_214792296_214792446_214797060_214797118_214809411
transcript_86742.known	chr2	+	2203	4	FSM	ENSG00000229267.3	ENST00000670391.1	2203	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.09120616516523	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATCTGATACCAAAACCTGG	214810112	True	NA	NA	False	NA	NA	NA	214810208	214963575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_214810433_214833988_214834106_214842736_214842833_214961809
transcript_86744.known	chr2	+	2104	4	FSM	ENSG00000229267.3	ENST00000655899.1	2104	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCAAGACTGAGCCAGGA	214810139	False	NA	NA	False	GATAAA	-19	NA	214810180	214963346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_214810433_214833988_214834106_214960392_214960591_214961809
transcript_86745.known	chr2	+	2089	3	FSM	ENSG00000229267.3	ENST00000664818.1	2089	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCCAGCATCATCTGATAC	214810120	True	NA	NA	False	NA	NA	NA	214810216	214963565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_214810433_214833988_214834106_214961809
transcript_86748.known	chr2	+	1972	16	FSM	ENSG00000138363.15	ENST00000236959.14	1972	16	0	0	0	0	multi-exon	FALSE	canonical	3	1067	junction_10	83.6645683667824	3510	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATAGTTTTTGGTAGTTG	215296693	True	NA	27	True	AATAAA	-23	NA	215312058	215349764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_215312162_215312497_215312625_215318156_215318234_215319664_215319732_215325240_215325330_215325986_215326139_215326821_215326979_215332381_215332508_215333349_215333458_215334918_215335005_215336034_215336125_215338778_215338908_215344778_215344872_215346758_215346942_215349093_215349250_215349535
transcript_86759.known	chr2	-	1867	8	FSM	ENSG00000115425.14	ENST00000265322.8	1867	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	33.5772031507773	190	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGGCAGTGCCTGATTT	-216080276	True	NA	-1	True	TATAAA	-37	NA	216081809	216038387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216039361_216043903_216044016_216049262_216049374_216051448_216051546_216058894_216058977_216065311_216065478_216066384_216066519_216081617
transcript_86764.nnic	chr2	-	1476	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	131	2	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	41.408211745981	27	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCGTATTGTTTTACT	-216010553	False	NA	-19	True	AATAAA	-15	NA	216013420	215942802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943458_215944779_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_86765.nnic	chr2	-	2116	6	NNC	ENSG00000118242.16	novel	2618	6	NA	NA	131	2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	44.5932730352909	52	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGATGTCGTATTGTTTTACT	-216010553	False	NA	-19	True	AATAAA	-15	NA	216013420	215942802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_215943588_215944269_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_86767.known	chr2	-	3148	5	FSM	ENSG00000118242.16	ENST00000263268.11	3148	5	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	4.63680924774785	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGATGTGTGTTATATTT	-216010684	True	NA	-1	True	ATTAAA	-23	NA	216013551	215942583	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_215944998_215945570_215945735_215947022_215947114_215996305_215996466_216013232
transcript_86774.nnic	chr2	+	699	3	NNC	ENSG00000163449.11	novel	3460	4	NA	NA	9	-17048	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATCATCCTTTTGTTGG	216081537	True	NA	NA	False	AATAAA	-1	NA	216081874	216082905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216081980_216082146_216082573_216082737
transcript_86776.known	chr2	+	3342	3	FSM	ENSG00000163449.11	ENST00000295658.8	3342	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	216081557	True	NA	24	True	AATAAA	-27	NA	216081894	216102783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216081976_216095837_216096235_216099919
transcript_86779.known	chr2	+	3322	3	FSM	ENSG00000163449.11	ENST00000437356.7	3322	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTCTTTGAGGCTCTTC	216081581	True	NA	24	True	AATAAA	-27	NA	216081918	216102783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216081980_216095837_216096235_216099919
transcript_86780.nic	chr2	+	864	2	ISM	ENSG00000163449.11	ENST00000455479.5	578	4	-44	17048	9	-17048	5prime_fragment	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCATCATCCTTTTGTTGG	216081537	True	NA	NA	False	AATAAA	-1	NA	216081874	216082905	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_216081980_216082146
transcript_86784.known	chr2	+	3761	23	FSM	ENSG00000079246.16	ENST00000392133.7	3761	23	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1379.7918972628	4457	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGTCTGCAAAAGACTT	NA	False	NA	35	True	ATTAAA	-38	NA	216107463	216206303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216107533_216107652_216107699_216109090_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_86792.known	chr2	+	3379	21	FSM	ENSG00000079246.16	ENST00000392132.7	3379	21	0	0	0	0	multi-exon	FALSE	canonical	3	3820	junction_1	365.854014601453	5247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCTGCTAATTATTGTCTG	216043190	True	NA	25	True	ATTAAA	-28	NA	216109347	216206293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117745_216117795_216119042_216119166_216122061_216122254_216125916_216126032_216127535_216127675_216130874_216130988_216132324_216132388_216137087_216137226_216138088_216138180_216141185_216141320_216148082_216148277_216160067_216160162_216161978_216162049_216190224_216190335_216192638_216192736_216194918_216194987_216204321_216204397_216205187
transcript_8680.known	chr1	-	694	5	FSM	ENSG00000134248.14	ENST00000483260.5	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	1185.13944327239	1187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-110394757	True	NA	-23	True	AATAAA	-21	NA	110407668	110401248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032_110407129_110407585
transcript_8684.known	chr1	+	1821	4	FSM	ENSG00000224699.10	ENST00000609512.6	1821	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	110407611	True	NA	NA	False	TATAAA	-29	NA	110407804	110416274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110409159_110412172_110412294_110414151_110414232_110416008
transcript_86843.known	chr2	+	576	5	FSM	ENSG00000079246.16	ENST00000429133.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1902.81107837851	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTGACATCTCCCTGCA	216043173	True	NA	NA	False	NA	NA	NA	216109330	216119139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216109458_216113015_216113130_216116658_216116843_216117740_216117795_216119042
transcript_86844.known	chr2	+	3056	18	FSM	ENSG00000138375.13	ENST00000358207.9	3056	18	0	0	0	0	multi-exon	FALSE	canonical	1	34	junction_1	27.2848615136685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGGAATTGAAATAAAATAAT	216412654	False	NA	4	True	AATAAA	-17	NA	216412742	216483017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216412799_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_86846.known	chr2	+	3201	18	FSM	ENSG00000138375.13	ENST00000357276.9	3201	18	0	0	0	0	multi-exon	FALSE	canonical	1	40	junction_5	24.4687499309505	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTGAGCTTCTCTTGCC	216411652	True	NA	25	True	AATAAA	-22	NA	216412483	216483053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216412649_216413855_216413893_216414646_216415516_216416256_216416308_216420298_216420533_216423632_216423684_216428595_216428783_216432717_216432869_216435337_216435497_216438419_216438486_216447017_216447159_216450845_216451065_216464596_216464668_216467943_216468047_216475268_216475452_216477108_216477210_216478202_216478300_216482737
transcript_86857.known	chr2	-	584	2	FSM	ENSG00000232485.4	ENST00000431856.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGAATTTTCCAGCTCCATT	-216498646	True	NA	NA	False	NA	NA	NA	216498750	216487803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216488244_216498606
transcript_86860.nnic	chr2	-	444	2	FSM	ENSG00000232485.4	ENST00000686779.1	409	2	-36	1	-36	-1	multi-exon	FALSE	canonical	3	12	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAGGTGGGAAGATCATT	-216498702	True	NA	NA	False	ATTAAA	-19	NA	216498806	216497589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216497834_216498606
transcript_86869.known	chr2	+	742	3	FSM	ENSG00000197756.10	ENST00000359681.3	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	127	167164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378222	True	NA	17	True	AATAAA	-23	NA	216498866	216501467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216499399_216499948_216500032_216501340
transcript_86870.known	chr2	+	401	4	FSM	ENSG00000197756.10	ENST00000456586.5	401	4	0	0	0	0	multi-exon	FALSE	canonical	1	179	junction_1	5884.98486734579	72497	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAATTGCCTTGGCTTGTTA	216499057	False	NA	13	True	AATAAA	-19	NA	216499085	216501463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216499152_216499269_216499399_216499948_216500032_216501340
transcript_86871.known	chr2	+	1701	3	FSM	ENSG00000197756.10	ENST00000490649.1	1701	3	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	1952	1613	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCTTGGCTTGTTAACTT	216378180	True	NA	17	True	AATAAA	-23	NA	216498824	216501467	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948
transcript_86872.known	chr2	+	495	4	FSM	ENSG00000197756.10	ENST00000446558.5	495	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	5234.1334420216	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAACCTTTACTCCTATAC	216378210	True	NA	13	True	AATATA	-21	NA	216498854	216579180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216578920
transcript_86873.known	chr2	+	385	5	FSM	ENSG00000197756.10	ENST00000420712.1	385	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5552.15602266363	11637	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAATTGCCTTGGCTTGTT	216378217	True	NA	12	True	AATAAA	-18	NA	216498861	216501462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499831_216499867_216499948_216500032_216501340
transcript_86874.known	chr2	+	2082	2	FSM	ENSG00000197756.10	ENST00000478153.1	2082	2	0	0	0	0	multi-exon	FALSE	canonical	3	12534	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGTAACAAAATTGCCTTGG	216378180	True	NA	6	True	AATAAA	-12	NA	216498824	216501456	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216499399_216499948
transcript_86875.known	chr2	+	2225	2	FSM	ENSG00000197756.10	ENST00000487233.1	2225	2	0	0	0	0	multi-exon	FALSE	canonical	3	8630	junction_1	0	633	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACAAAATTGCCTTGGCTTG	216378199	True	NA	10	True	AATAAA	-16	NA	216498843	216501460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269
transcript_86876.known	chr2	+	425	4	FSM	ENSG00000197756.10	ENST00000600880.5	425	4	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_3	5204.5068503707	4833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCCAAGATCATGCCTCAT	216378205	True	NA	NA	False	NA	NA	NA	216498849	216529454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216498878_216499269_216499399_216499948_216500032_216529269
transcript_86879.nnic	chr2	+	680	3	Fusion	ENSG00000225794.3_ENSG00000197756.10	novel	2992	4	NA	NA	130	5	multi-exon	FALSE	canonical	0	0	junction_2	6267	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATACTCTAGTTCTTCCAA	216498610	True	NA	NA	False	AATAAA	-25	NA	216499269	216611211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_+_216499399_216499948_216500032_216610743
transcript_86880.nnic	chr2	+	655	3	NNC	ENSG00000225794.3	novel	654	2	NA	NA	-1896	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTTGCACCATACTCTAG	NA	False	NA	NA	False	AATAAA	-16	NA	216602874	216611202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216602969_216604863_216604966_216610743
transcript_86883.nnic	chr2	+	984	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	-240	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	5083.7631730835	1779	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	NA	False	NA	16	True	ATTAAA	-16	NA	216632587	216664436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216632704_216660556_216660787_216661857_216661999_216663939
transcript_86886.nnic	chr2	+	1191	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	125	0	at_least_one_novel_splicesite	FALSE	canonical	3	76	junction_1	5051.25231996977	1771	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216632909	False	NA	16	True	ATTAAA	-16	NA	216632952	216664436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216633276_216660556_216660787_216661857_216661999_216663939
transcript_86887.known	chr2	+	1414	4	FSM	ENSG00000115457.10	ENST00000233809.9	1414	4	0	0	0	0	multi-exon	FALSE	canonical	3	10277	junction_1	287.964503985397	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216585187	True	NA	16	True	ATTAAA	-16	NA	216633419	216664436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_216633966_216660556_216660787_216661857_216661999_216663939
transcript_86889.nnic	chr2	+	1135	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	2613	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5087.06138704415	1751	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216636017	False	NA	16	True	ATTAAA	-16	NA	216636041	216664436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216636309_216660556_216660787_216661857_216661999_216663939
transcript_8689.known	chr1	-	1154	4	FSM	ENSG00000134248.14	ENST00000474861.6	1154	4	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	1105.4544565723	638	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTTCTAGATTCTTTAAA	-110394760	True	NA	-23	True	AATAAA	-21	NA	110407671	110401248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110401584_110403918_110404037_110406317_110406380_110407032
transcript_86890.nnic	chr2	+	924	4	NNC	ENSG00000115457.10	novel	751	3	NA	NA	2614	0	at_least_one_novel_splicesite	FALSE	canonical	1	25	junction_1	5075.28206112724	1754	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTGTCTTTTGCCTGAG	216636018	False	NA	16	True	ATTAAA	-16	NA	216636042	216664436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_216636099_216660556_216660787_216661857_216661999_216663939
transcript_86891.known	chr2	-	6239	4	FSM	ENSG00000115461.5	ENST00000233813.5	6239	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	2.49443825784929	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGCGTCGGCTTCCTCCG	-216695326	True	NA	-1	True	AATAAA	-17	NA	216695549	216672104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_216676883_216678111_216678232_216678849_216679080_216694438
transcript_86895.nnic	chr2	-	648	2	NNC	ENSG00000231672.8	novel	1342	10	NA	NA	-6	43704	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	13	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAATTGTGTTTATTTAA	-217756443	True	NA	NA	False	ATTAAA	-28	NA	217756567	217660195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_217660744_217756467
transcript_86899.known	chr2	+	262	4	FSM	ENSG00000180871.8	ENST00000449014.5	262	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGGTGAAGATCTTAGTAA	218125668	True	NA	NA	False	NA	NA	NA	218125704	218134846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218125782_218126290_218126354_218129313_218129366_218134776
transcript_86921.known	chr2	+	1410	11	FSM	ENSG00000163466.16	ENST00000315717.10	1410	11	0	0	0	0	multi-exon	TRUE	canonical	3	2761	junction_1	271.588457044846	6904	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAATTTGCTGGGTTT	218194429	True	NA	14	True	AATAAA	-19	NA	218217188	218254348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218217255_218217462_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_86922.known	chr2	+	1605	10	FSM	ENSG00000163466.16	ENST00000295685.14	1605	10	0	0	0	0	multi-exon	FALSE	canonical	3	3052	junction_2	215.024029664904	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGCTGGGTTTCTGGACTG	218194450	True	NA	22	True	AATAAA	-27	NA	218217209	218254356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663_218238851_218239390_218239485_218245419_218245547_218249363_218249465_218249820_218249922_218253890
transcript_86923.known	chr2	+	644	5	FSM	ENSG00000163466.16	ENST00000456575.1	644	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1807.5011756566	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATTCCACTTGATCAACT	218245341	True	NA	84	True	ATTAAA	-13	NA	218245425	218254123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218245547_218249363_218249465_218249820_218249922_218252944_218253033_218253890
transcript_86924.known	chr2	+	816	5	FSM	ENSG00000163466.16	ENST00000465395.5	816	5	0	0	0	0	multi-exon	FALSE	canonical	3	3052	junction_2	94.3345111822815	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTGCTGCCTCTCTTAGG	218217372	True	NA	10	True	AATAAA	-20	NA	218217454	218239195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218217545_218225919_218225955_218228737_218228851_218234351_218234398_218238663
transcript_86929.known	chr2	-	1804	11	FSM	ENSG00000127837.10	ENST00000444053.5	1804	11	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_10	323.174890732557	3917	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGAGTCTGTGTGGATTT	-218257692	True	NA	-7	True	AATAAA	-15	NA	218270178	218264128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381_218269538_218269965
transcript_86930.known	chr2	-	1761	10	FSM	ENSG00000127837.10	ENST00000420660.5	1761	10	0	0	0	0	multi-exon	FALSE	canonical	3	1131	junction_1	31.7668979044089	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTTTAAAAATGTAAATAAAA	-218269730	False	12486	-40	True	NA	NA	NA	218269740	218264161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218264609_218265019_218265175_218265370_218265462_218265578_218265683_218265830_218265947_218266063_218266148_218266442_218266588_218266846_218266987_218267493_218267614_218269381
transcript_86932.known	chr2	-	2292	12	FSM	ENSG00000135926.15	ENST00000258412.8	2292	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	38.4787158081963	228	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGTATGGCTCCAGGAGT	-218290944	True	NA	-3	True	AATAAA	-22	NA	218292503	218274196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218275622_218276025_218276080_218277003_218277100_218277365_218277454_218277632_218277671_218277934_218277975_218278514_218278566_218279037_218279092_218279288_218279354_218280025_218280127_218281939_218282182_218292465
transcript_8694.known	chr1	+	817	3	FSM	ENSG00000224699.10	ENST00000457535.5	817	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTGCAGTGTCATTA	NA	False	NA	NA	False	TATAAA	-29	NA	110407524	110416274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110407955_110412172_110412294_110416008
transcript_86942.known	chr2	-	480	3	FSM	ENSG00000225062.1	ENST00000441749.1	480	3	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_2	3.5	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCAGCCTGTGGTGTTTTGT	-218367683	True	NA	-3	True	AATATA	-16	NA	218367835	218366664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218366799_218366926_218367028_218367590
transcript_86944.known	chr2	+	758	3	FSM	ENSG00000127838.15	ENST00000248451.7	758	3	0	0	0	0	multi-exon	FALSE	canonical	3	1088	junction_1	106	10714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGGTCTGGGTTTGTGAGT	218270372	False	NA	26	True	AATAAA	-27	NA	218270391	218272947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218270603_218271380_218271550_218272569
transcript_86945.known	chr2	+	1372	2	FSM	ENSG00000127838.15	ENST00000469689.1	1372	2	0	0	0	0	multi-exon	FALSE	canonical	3	1300	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGCAAATAAAGTTATTGAGT	218261756	True	NA	-10	True	NA	NA	NA	218270519	218272911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218271550_218272569
transcript_86946.known	chr2	+	2525	7	FSM	ENSG00000144579.8	ENST00000273062.7	2525	7	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_2	6.81705377873919	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTTCTGTGGTTATTG	218399802	True	NA	13	True	ACTAAA	-19	NA	218399867	218405941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218400158_218401563_218401713_218402110_218402216_218402348_218402406_218403034_218403128_218403231_218403418_218404296
transcript_86947.known	chr2	+	998	6	FSM	ENSG00000144579.8	ENST00000497677.5	998	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	5.70613704707484	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAATTTTAACAAAATGAAA	218399941	False	NA	NA	False	NA	NA	NA	218400070	218403741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218400158_218401563_218401713_218402113_218402216_218402348_218402406_218403034_218403128_218403231
transcript_8695.known	chr1	+	574	3	FSM	ENSG00000224699.10	ENST00000590826.3	574	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTTACCTTGCAGTGTCAT	110408776	False	NA	NA	False	TATAAA	-27	NA	110408969	110416272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110409159_110412172_110412294_110416008
transcript_86958.known	chr2	-	5019	26	FSM	ENSG00000135913.11	ENST00000454775.5	5019	26	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_23	10.6473658714257	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAACAAAAACAAAAAAAAC	-218565375	True	NA	NA	False	ATTAAA	-8	NA	218568325	218453267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218455018_218455579_218455719_218457091_218457162_218459789_218459906_218463305_218463367_218466009_218466177_218474629_218474886_218476839_218476982_218479649_218479716_218482069_218482235_218485663_218485744_218488303_218488422_218495759_218495951_218497733_218497858_218498025_218498158_218509978_218510141_218529955_218530041_218534608_218534707_218546220_218546299_218546918_218547092_218549808_218549910_218553552_218553725_218558497_218558718_218560819_218560884_218562672_218562814_218568177
transcript_86959.known	chr2	+	6500	20	FSM	ENSG00000127831.11	ENST00000248444.10	6500	20	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_10	3.1172827147286	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTCACTCAGACTGCAGT	218418902	True	NA	NA	False	NA	NA	NA	218419122	218453295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218419169_218423767_218423854_218424276_218424352_218425614_218425812_218427964_218428074_218428226_218428338_218429284_218429488_218429596_218429676_218429848_218429948_218430724_218430879_218431856_218431958_218432045_218432184_218432792_218432952_218434525_218434706_218435288_218435435_218436481_218436627_218437123_218437313_218438657_218438727_218440721_218440863_218449222
transcript_86968.known	chr2	+	1126	8	FSM	ENSG00000144580.14	ENST00000295701.9	1126	8	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_7	46.3324279263565	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAAGTAAACTATTGAACC	218557695	True	NA	-1	True	AATAAA	-18	NA	218568874	218593842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218593527
transcript_86969.known	chr2	+	3820	8	FSM	ENSG00000144580.14	ENST00000273064.11	3820	8	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_7	35.4700218350594	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGGAATAGGAAACCTTAG	218557659	True	NA	NA	False	NA	NA	NA	218568838	218597080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107
transcript_86979.known	chr2	+	3259	9	FSM	ENSG00000144580.14	ENST00000542068.5	3259	9	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	69.268386548266	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAATAATTTTTCCTTTAC	218568622	False	NA	65	True	AATAAA	-19	NA	218568707	218596424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218568979_218580560_218580741_218582970_218583087_218584611_218584722_218587585_218587696_218592303_218592403_218592615_218592708_218594107_218596299_218596334
transcript_86983.known	chr2	+	1525	9	FSM	ENSG00000074582.15	ENST00000392110.6	1525	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	86.4102677637328	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657332	True	NA	18	True	AATAAA	-14	NA	218659713	218663442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659744_218660036_218660167_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_86985.known	chr2	+	1636	9	FSM	ENSG00000074582.15	ENST00000392111.7	1636	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	86.4102677637328	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657301	True	NA	19	True	AATAAA	-15	NA	218659682	218663443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659744_218660036_218660246_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_86991.known	chr2	+	1483	9	FSM	ENSG00000074582.15	ENST00000439945.5	1483	9	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	83.8331676605387	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTCTCCTCCTCTAGCTCA	218657378	True	NA	-20	True	NA	NA	NA	218659759	218663404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659801_218660306_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_87004.known	chr2	+	1430	8	FSM	ENSG00000074582.15	ENST00000412366.5	1430	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	74.4747594552568	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657355	True	NA	19	True	AATAAA	-15	NA	218659736	218663443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659801_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_87007.known	chr2	+	2015	8	FSM	ENSG00000074582.15	ENST00000431802.5	2015	8	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	64.8854563749042	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTGCTCTCTCATCTCCC	218657390	True	NA	18	True	AATAAA	-14	NA	218659771	218663442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218660422_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_87014.known	chr2	+	1427	8	FSM	ENSG00000074582.15	ENST00000359273.8	1427	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	60.6458437763623	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGCTCTCTCATCTCCCT	218657301	True	NA	19	True	AATAAA	-15	NA	218659682	218663443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218659744_218660938_218661308_218661405_218661546_218661758_218661954_218662196_218662261_218662509_218662680_218662882_218663001_218663133
transcript_87018.known	chr2	-	1477	10	FSM	ENSG00000163481.8	ENST00000295704.7	1477	10	0	0	0	0	multi-exon	FALSE	canonical	3	231	junction_3	16.0208197875972	432	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGCTTTCTTTGCTTAGC	-218669191	True	NA	-35	True	AATAAA	-15	NA	218672002	218663891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_218664536_218664738_218664874_218665154_218665248_218665915_218666060_218666158_218666231_218667911_218667982_218668078_218668147_218668238_218668342_218668604_218668680_218671929
transcript_8702.known	chr1	-	553	3	FSM	ENSG00000134248.14	ENST00000602858.5	553	3	0	0	0	0	multi-exon	FALSE	canonical	3	2430	junction_2	6	856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGGATCTTTTCTAGAT	-110406055	False	NA	-31	True	AATAAA	-13	NA	110406425	110401256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110401584_110403918_110404037_110406317
transcript_8703.known	chr1	+	1569	9	FSM	ENSG00000143119.14	ENST00000648608.1	1569	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	2.14694550466471	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCACAACATTGCTATATATC	110871095	True	NA	15	True	AATAAA	-20	NA	110871187	110899922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_110871260_110873155_110873249_110891391_110891472_110892344_110892534_110894326_110894402_110894959_110895056_110896652_110896734_110897808_110897893_110899123
transcript_87034.known	chr2	+	4721	27	FSM	ENSG00000163482.12	ENST00000440309.5	4721	27	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	20.507611518105	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATACTTGAAGCTCCCAGGAC	218672195	False	NA	11	True	AATAAA	-15	NA	218672295	218702623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_218672366_218672740_218672914_218673624_218673766_218673878_218673957_218675342_218675474_218676028_218676279_218679167_218679262_218679559_218679730_218679892_218680081_218680602_218680703_218685084_218685229_218688696_218688877_218689858_218689957_218690449_218690556_218692142_218692294_218692582_218692711_218693239_218693345_218693722_218693822_218693894_218693984_218694263_218694328_218694524_218694636_218696526_218696602_218697038_218697214_218697462_218697611_218697853_218698002_218698601_218699349_218701865
transcript_87037.nnic	chr2	+	796	2	NNC	ENSG00000288898.1	novel	453	2	NA	NA	2	4	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTGAGATGATCCTTCTG	218909017	True	NA	NA	False	ATTAAA	-21	NA	218909159	218920728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_218909450_218920222
transcript_87039.nnic	chr2	+	454	2	NNC	ENSG00000288898.1	novel	453	2	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAATTGTTGAGATGATCCT	218909017	True	NA	NA	False	ATTAAA	-17	NA	218909159	218920724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_218909450_218920560
transcript_87041.nic	chr2	-	300	2	ISM	ENSG00000181378.14	ENST00000453220.5	5877	33	35798	0	16445	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTACCTTGACTTTATTTC	NA	False	NA	-1	True	AGTAAA	-22	NA	219003259	219002846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_219003022_219003134
transcript_87043.known	chr2	-	8020	8	FSM	ENSG00000187736.13	ENST00000356853.10	8020	8	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_5	9.31095470674304	237	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGCTATTTTCATTTGT	-219158915	True	NA	-8	True	ATTAAA	-18	NA	219160815	219069356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_87044.nic	chr2	-	1355	8	NIC	ENSG00000187736.13	novel	8020	8	NA	NA	-1	319	combination_of_known_junctions	FALSE	canonical	3	9	junction_7	50.6464334824259	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGCTTTTGGGATTACTTA	-219158656	False	1900	-35	True	AATAAA	-15	NA	219160556	219075972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_219076456_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160509
transcript_87048.nnic	chr2	-	1064	6	NNC	ENSG00000187736.13	novel	547	5	NA	NA	2	1134	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	59.6778015680873	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTATGTATAGATTATTTG	NA	False	NA	-10	True	AGTAAA	-20	NA	219160863	219145572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_219145905_219146679_219146739_219147656_219147796_219157471_219157685_219158185_219158363_219160719
transcript_87049.known	chr2	-	1954	7	FSM	ENSG00000187736.13	ENST00000409720.5	1954	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	56.0904527427698	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGCTAACATTTATTGAGCA	-219156462	False	NA	-23	True	AATAAA	-30	NA	219158362	219075316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219076446_219077245_219077365_219078088_219078207_219146679_219146739_219147656_219147796_219157471_219157685_219158185
transcript_87051.known	chr2	-	1154	9	FSM	ENSG00000115649.16	ENST00000453038.5	1154	9	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_8	97.2869467092066	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGGCAGTCTTCTGGCCTCA	-219177072	False	NA	NA	False	GGGGCT	-12	NA	219177313	219172893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759_219176848_219177103
transcript_87053.known	chr2	-	2019	8	FSM	ENSG00000115649.16	ENST00000360507.10	2019	8	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_5	23.0429944199259	383	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCCTGGACTTTTCCTTCT	-219173889	True	NA	-8	True	AATAAA	-15	NA	219176925	219171896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219173129_219173349_219173468_219174145_219174208_219174777_219174907_219174987_219175109_219175590_219175673_219176222_219176332_219176759
transcript_87059.known	chr2	+	944	10	FSM	ENSG00000158552.13	ENST00000409336.5	944	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	45.2297291066587	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTGGAGGTCGCCCTG	219205574	True	NA	NA	False	NA	NA	NA	219206808	219209418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_87068.known	chr2	+	1070	9	FSM	ENSG00000158552.13	ENST00000621130.4	1070	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	58.4759565975624	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTGTGTTTCTCTCTCCT	219205549	True	NA	NA	False	AATAAA	-29	NA	219206783	219209651	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219206846_219206966_219207043_219207326_219207422_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_87069.known	chr2	+	1322	9	FSM	ENSG00000158552.13	ENST00000289528.10	1322	9	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_5	20.4068003371425	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAAGTGGTGTGTTTCTCTCT	219205547	True	NA	NA	False	AATAAA	-26	NA	219206781	219209648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219207043_219207326_219207422_219207647_219207780_219207886_219208039_219208255_219208349_219208425_219208487_219208571_219208640_219208976_219209050_219209261
transcript_8707.nnic	chr1	-	942	3	Antisense	novelGene_ENSG00000143119.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_2	1	23	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTGCATAAGTGTTAATTT	NA	False	NA	-15	True	AATAAA	-20	NA	110927725	110877034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_110877686_110890725_110890845_110927553
transcript_87079.known	chr2	-	2980	19	FSM	ENSG00000115657.14	ENST00000265316.9	2980	19	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_12	32.189638697975	232	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGATCACTGTGGCTTTG	-219217509	True	NA	-8	True	AATAAA	-14	NA	219218958	219209771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219210047_219210229_219210299_219210380_219210476_219210710_219210824_219210933_219211109_219212386_219212492_219213007_219213066_219213240_219213327_219213438_219213503_219213589_219213667_219213825_219213952_219214120_219214187_219214388_219214499_219214960_219215083_219215996_219216181_219216363_219216466_219216651_219216833_219217669_219217808_219218124
transcript_87084.known	chr2	-	3770	16	FSM	ENSG00000198925.12	ENST00000361242.9	3770	16	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_15	56.692935087971	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219225242	True	NA	-3	True	AATAAA	-18	NA	219229636	219219379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229534
transcript_87085.known	chr2	-	3799	15	FSM	ENSG00000198925.12	ENST00000396761.6	3799	15	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_14	75.6443410079737	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTTGTTGTCTCGCGCGG	-219229611	False	NA	-3	True	AATAAA	-18	NA	219229717	219219379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219229534
transcript_87088.known	chr2	-	4025	16	FSM	ENSG00000198925.12	ENST00000409618.5	4025	16	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_15	75.9961987353461	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GACTTCTTGTTGTCTCGCGC	-219229262	False	NA	-5	True	AATAAA	-16	NA	219229368	219219381	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219220453_219220746_219220893_219221079_219221303_219222049_219222168_219222271_219222451_219222644_219222894_219223584_219223765_219223868_219224023_219224105_219224855_219225070_219225213_219225410_219225573_219226868_219226934_219227769_219227814_219227921_219228054_219228433_219228486_219229009
transcript_87093.known	chr2	+	2540	14	FSM	ENSG00000163516.14	ENST00000323348.10	2540	14	0	0	0	0	multi-exon	FALSE	canonical	2	155	junction_5	46.7605001972629	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGGCCTTTAGTTCCTTA	219225092	True	NA	60	True	AATAAA	-42	NA	219229805	219236679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_871.known	chr1	-	2010	11	FSM	ENSG00000131591.18	ENST00000379325.7	2010	11	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	19.3465759244369	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115104	True	NA	-11	True	TATAAA	-16	NA	1116095	1081822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1082988_1083914_1084087_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_8710.nnic	chr1	-	820	2	Antisense	novelGene_ENSG00000143119.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATATTGCATAAGTGTTAA	NA	False	NA	-18	True	AATAAA	-17	NA	110927725	110877037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_110877686_110927553
transcript_87112.known	chr2	+	2155	11	FSM	ENSG00000163516.14	ENST00000409849.5	2155	11	0	0	0	0	multi-exon	TRUE	canonical	2	10	junction_1	89.2930568409437	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGAGGCACTGTGGCCTT	219225073	True	NA	50	True	AATAAA	-32	NA	219229786	219236669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_87121.known	chr2	+	3118	8	FSM	ENSG00000115661.14	ENST00000396738.7	3118	8	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	10.5249945465108	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	219243312	True	NA	8	True	AATAAA	-15	NA	219245478	219250337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245797_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_87125.known	chr2	+	2868	8	FSM	ENSG00000115661.14	ENST00000409638.7	2868	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11.3317325800297	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCAGCTGCTTTATTC	NA	False	NA	8	True	AATAAA	-15	NA	219245454	219250337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245523_219245895_219246086_219246656_219246877_219247112_219247247_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_87136.known	chr2	+	895	6	FSM	ENSG00000115661.14	ENST00000409516.7	895	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.7082869338697	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTACTGAGTGGGGGTGGG	219243316	True	NA	NA	False	NA	NA	NA	219245482	219248746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245523_219245895_219246086_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_87139.known	chr2	+	993	5	FSM	ENSG00000163516.14	ENST00000486203.5	993	5	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_2	8.52569645248997	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAATGCAACAGATATGT	219225133	True	NA	NA	False	ATTAAA	-44	NA	219229846	219233034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227_219230406_219231927_219232041_219232259_219232363_219232489
transcript_8714.known	chr1	-	3313	4	FSM	ENSG00000121931.16	ENST00000369763.5	3313	4	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_3	40.4749579644281	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTCTGTCTGGTTAATC	-110960442	True	NA	-11	True	NA	NA	NA	110963922	110947189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110948400_110949850_110950124_110951287_110952816_110963620
transcript_87146.known	chr2	-	673	4	FSM	ENSG00000127824.15	ENST00000456818.5	673	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	108.52649446103	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTGTCTACAGCCGTGGTC	-219253133	False	NA	NA	False	AAGAAA	-35	NA	219253145	219251172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219252995
transcript_87147.known	chr2	-	648	4	FSM	ENSG00000127824.15	ENST00000447205.1	648	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	105.237297993102	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	-219253342	False	NA	NA	False	AAGAAA	-14	NA	219253354	219251193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253208
transcript_87149.known	chr2	-	2049	4	FSM	ENSG00000127824.15	ENST00000248437.9	2049	4	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_3	12.2292908852294	1603	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTTGTGATTTCTTTC	-219249050	True	NA	NA	False	ATTAAA	-17	NA	219253918	219249709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219252007_219252231_219253855
transcript_87151.known	chr2	-	790	3	FSM	ENSG00000127824.15	ENST00000498660.1	790	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	116	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCAAGGATGTCAACGCT	-219249033	True	NA	NA	False	NA	NA	NA	219253901	219250728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251324_219251564_219251714_219253855
transcript_87155.known	chr2	-	804	3	FSM	ENSG00000127824.15	ENST00000462806.5	804	3	0	0	0	0	multi-exon	FALSE	canonical	3	229	junction_2	14.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCCATCTACCCAGCCCCC	-219249048	True	NA	NA	False	AAGAAA	-14	NA	219253916	219251193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219251714_219252007_219252231_219253855
transcript_87156.known	chr2	+	579	2	FSM	ENSG00000115661.14	ENST00000491697.1	579	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCATCTGTCAAGTGCAGAG	219243306	True	NA	NA	False	NA	NA	NA	219245472	219246424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245523_219245895
transcript_87159.known	chr2	+	647	2	FSM	ENSG00000163516.14	ENST00000464763.5	647	2	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAGAGTCTCGCTCTGT	219225069	True	NA	NA	False	NA	NA	NA	219229782	219230756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219230227
transcript_87160.known	chr2	+	2486	14	FSM	ENSG00000163516.14	ENST00000410034.7	2486	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.9644893523586	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATGTGTACTTGTACTTACA	219225174	True	NA	30	True	AATAAA	-12	NA	219229887	219236649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229959_219230227_219230406_219231927_219232041_219232259_219232363_219232489_219232684_219233078_219233192_219233285_219233434_219233714_219233944_219234132_219234289_219234825_219235313_219235473_219235586_219235707_219235876_219236009_219236096_219236321
transcript_87161.known	chr2	+	2094	6	FSM	ENSG00000115661.14	ENST00000496443.5	2094	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	16.4851448279959	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATCTTAGTCTCAGTGTTC	219243340	True	NA	15	True	AATAAA	-19	NA	219245506	219248904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219245797_219245895_219246877_219247414_219247536_219247661_219247758_219248192_219248315_219248420
transcript_87162.known	chr2	+	576	2	FSM	ENSG00000163516.14	ENST00000475202.5	576	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTCAGGGTGGTAATATTAA	219225092	True	NA	NA	False	NA	NA	NA	219229805	219232970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219229901_219232489
transcript_87164.known	chr2	+	1946	10	FSM	ENSG00000135924.17	ENST00000392086.8	1946	10	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_9	4.07643029507648	547	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTGTGTTGTGTTCTT	219275603	True	NA	16	True	AATAAA	-18	NA	219279343	219286898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219279519_219279797_219279899_219280577_219280688_219281717_219281772_219281938_219282062_219282836_219282930_219283132_219283236_219283418_219283490_219284631_219284836_219285986
transcript_87166.nnic	chr2	+	1141	5	NNC	ENSG00000230432.1	novel	311	3	NA	NA	-110	0	intron_retention	FALSE	canonical	2	12	junction_2	4.96865172858795	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298723	True	NA	7	True	AATAAA	-19	NA	219298891	219304130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_219299129_219299625_219300171_219300374_219300425_219303676_219303852_219303996
transcript_87168.nnic	chr2	+	598	4	NNC	ENSG00000230432.1	novel	311	3	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	2.49443825784929	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298721	True	NA	7	True	AATAAA	-19	NA	219298889	219304130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_219299129_219300374_219300425_219303676_219303852_219303996
transcript_8717.known	chr1	-	1796	3	FSM	ENSG00000121931.16	ENST00000485275.2	1796	3	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	45.5	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATTTAATATTTCTTAAAC	-110960485	True	NA	-43	True	AAAAAG	-20	NA	110963965	110947221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_110948400_110949850_110950124_110963620
transcript_87170.nnic	chr2	+	966	4	NNC	ENSG00000230432.1	novel	311	3	NA	NA	-110	0	intron_retention	FALSE	canonical	2	9	junction_3	6.94422221866655	20	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298723	True	NA	7	True	AATAAA	-19	NA	219298891	219304130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_219299129_219299625_219300171_219300374_219300425_219303996
transcript_87173.known	chr2	+	311	3	FSM	ENSG00000230432.1	ENST00000417355.1	311	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGATTGTTATTATCATTA	219298833	True	NA	7	True	AATAAA	-19	NA	219299001	219304130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219299129_219300374_219300425_219303996
transcript_87176.known	chr2	-	797	7	FSM	ENSG00000182698.12	ENST00000333527.6	797	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGAGTTTGTCTTGAGGC	NA	False	NA	NA	False	ATTAAA	-18	NA	219333177	219327406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219327564_219328923_219329009_219329162_219329253_219329636_219329765_219330770_219330876_219332523_219332739_219333160
transcript_87181.known	chr2	-	1657	15	FSM	ENSG00000123992.20	ENST00000373963.5	1657	15	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_13	158.892082488559	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-219381492	True	NA	-3	True	ATTAAA	-16	NA	219387929	219374195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386949_219387069_219387164_219387758
transcript_87183.known	chr2	-	1875	15	FSM	ENSG00000123992.20	ENST00000373966.5	1875	15	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_14	176.106878494456	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTCCGTGCTACGCTTA	-219381495	True	NA	-3	True	ATTAAA	-16	NA	219387932	219374195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387575
transcript_87184.known	chr2	-	3825	15	FSM	ENSG00000123992.20	ENST00000273075.9	3825	15	0	0	0	0	multi-exon	FALSE	canonical	3	624	junction_5	36.3551079980657	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATATATCATTGTACATTTG	-219381475	True	NA	-14	True	GATAAA	-5	NA	219387912	219372042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219374343_219374854_219375023_219381334_219381437_219381544_219381585_219381978_219382140_219383130_219383215_219384365_219384444_219385423_219385532_219385630_219385707_219385967_219386099_219386285_219386412_219386664_219386779_219386891_219386981_219387069_219387164_219387758
transcript_87214.known	chr2	+	1631	8	FSM	ENSG00000175084.13	ENST00000477226.6	1631	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2.9277002188456	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAAGCTGGCCCCTGTTGT	219419964	True	NA	4	True	AATAAA	-16	NA	219420042	219426734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219420156_219420250_219420347_219420494_219420657_219420827_219420954_219421339_219421561_219423776_219423821_219425662_219425746_219425948
transcript_87216.known	chr2	+	1501	13	FSM	ENSG00000144591.20	ENST00000373908.5	1501	13	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	90.5799217388833	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCAGCACAGACTGTACTT	219494732	True	NA	12	True	AATAAA	-16	NA	219498905	219506988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87220.known	chr2	+	1522	13	FSM	ENSG00000144591.20	ENST00000313597.10	1522	13	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	67.2298606771326	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494717	True	NA	13	True	AATAAA	-17	NA	219498890	219506989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87222.known	chr2	+	1725	13	FSM	ENSG00000144591.20	ENST00000683691.1	1725	13	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	151.663804918056	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494825	False	NA	-12	True	NA	NA	NA	219498998	219506964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499960_219500021_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87223.known	chr2	+	1823	13	FSM	ENSG00000144591.20	ENST00000358215.8	1823	13	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	87.7044832884208	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCAGCACAGACTGTACTTA	219494727	True	NA	13	True	AATAAA	-17	NA	219498900	219506989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87228.known	chr2	+	1797	13	FSM	ENSG00000144591.20	ENST00000622191.2	1797	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	99.2651821581409	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494733	True	NA	-12	True	NA	NA	NA	219498906	219506964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87229.known	chr2	+	1537	13	FSM	ENSG00000144591.20	ENST00000683386.1	1537	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	135.148966165323	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494932	False	NA	-12	True	NA	NA	NA	219499105	219506964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219499255_219499955_219500016_219500120_219500219_219501475_219501580_219501911_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87230.known	chr2	+	1335	13	FSM	ENSG00000144591.20	ENST00000341142.8	1335	13	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	108.022245651327	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAGGGCTGCCAGAAGGCCC	219494741	True	NA	NA	False	NA	NA	NA	219498914	219506798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498972_219499960_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87236.known	chr2	+	1630	12	FSM	ENSG00000144591.20	ENST00000373917.7	1630	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	70.2157242637595	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGACTCCTGGGTTTTCTCCC	219494714	True	NA	-41	True	NA	NA	NA	219498887	219506935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219501580_219501850_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87239.known	chr2	+	1814	12	FSM	ENSG00000144591.20	ENST00000683241.1	1814	12	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	118.883511288144	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494691	True	NA	-12	True	NA	NA	NA	219498864	219506964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504214_219505227_219505363_219505457_219505556_219505694_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87266.known	chr2	+	1457	5	FSM	ENSG00000072195.15	ENST00000396688.5	1457	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_1	35.2880999771878	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAAGTCCAGTTTGTACCT	219460666	True	NA	-9	True	NA	NA	NA	219460765	219466841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219460997_219461881_219462058_219462297_219462387_219464432_219464609_219466056
transcript_87271.known	chr2	+	408	2	FSM	ENSG00000286095.3	ENST00000475104.1	408	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGCGTCTGTCCTGCTCTTCC	219497658	False	NA	NA	False	AATAAA	-18	NA	219497690	219498287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219497862_219498050
transcript_87272.known	chr2	-	636	1	FSM	ENSG00000268603.1	ENST00000601508.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTGACGTTGAGCAAATCA	-219498225	False	NA	NA	False	AATACA	-19	NA	219498246	219497610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219497600_219498200
transcript_87273.known	chr2	+	1799	12	FSM	ENSG00000144591.20	ENST00000684274.1	1799	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	125.630969493464	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTAATAAACCCCGTGAACC	219494691	True	NA	-12	True	NA	NA	NA	219498864	219506964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219498939_219499955_219500016_219500120_219500219_219501475_219502038_219502381_219502442_219504082_219504219_219505227_219505363_219505457_219505556_219505714_219505762_219505979_219506073_219506253_219506423_219506697
transcript_87274.known	chr2	+	2213	5	FSM	ENSG00000188760.11	ENST00000373883.4	2213	5	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	7.46240577829965	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTGGTCTTTGGTGGCTGG	219543572	True	NA	36	True	TATAAA	-31	NA	219544027	219550595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219544378_219544688_219544894_219547505_219548082_219549151_219549355_219549716
transcript_87279.nic	chr2	-	691	4	ISM	ENSG00000124006.15	ENST00000373876.5	5503	20	18505	-28	-22	0	3prime_fragment	FALSE	canonical	3	61	junction_3	35.4432253360529	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCCTTGCCTCTCTGAGTG	-219552672	False	NA	-4	True	AATAAA	-15	NA	219552736	219550727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_219550843_219551528_219551799_219552111_219552217_219552535
transcript_87280.known	chr2	-	694	4	FSM	ENSG00000124006.15	ENST00000489804.5	694	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	53.8227543785051	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219552650	False	NA	-5	True	AATAAA	-14	NA	219552714	219550728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219550869_219551528_219551799_219552111_219552217_219552535
transcript_87283.known	chr2	-	5380	16	FSM	ENSG00000124006.15	ENST00000465149.1	5380	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	237.287636050053	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219570711	False	NA	-5	True	AATAAA	-14	NA	219570739	219550728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219551799_219552111_219552217_219552535_219553025_219556019_219556293_219556577_219556724_219557342_219557619_219557822_219558111_219559224_219559498_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219570220
transcript_87285.known	chr2	+	544	1	FSM	ENSG00000269068.1	ENST00000597192.1	544	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGTCCACAGTTTGTTCTC	219558956	False	NA	NA	False	AGTAAA	-18	NA	219559082	219559626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219559100_219559600
transcript_87286.known	chr2	-	662	3	FSM	ENSG00000124006.15	ENST00000462534.5	662	3	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_1	11.5	1370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCCTTGCCTCTCTGAGT	-219551039	True	NA	-5	True	AATAAA	-14	NA	219552389	219550728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219550843_219551528_219551799_219552111
transcript_87287.known	chr2	-	1571	5	FSM	ENSG00000124006.15	ENST00000456147.1	1571	5	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	26.089988501339	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGACTTGCCATGGGCAT	-219559419	False	NA	-1	True	TATAAA	-16	NA	219559431	219555762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219556293_219556453_219556724_219557822_219558111_219558183_219558460_219559224
transcript_87288.known	chr2	-	2274	9	FSM	ENSG00000124006.15	ENST00000289656.3	2274	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_8	178.523632889318	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACCAATAAACATGCAAATAA	-219568639	True	NA	-42	True	NA	NA	NA	219571464	219561746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_219562009_219562401_219562675_219563354_219563628_219565241_219565515_219566829_219567127_219567272_219567576_219567717_219567970_219568054_219568325_219571393
transcript_87293.known	chr2	+	3618	25	FSM	ENSG00000144589.22	ENST00000456909.6	3618	25	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	12.6160584397646	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATGTGTGGTACTTAGA	219596454	True	NA	15	True	AATAAA	-18	NA	219597856	219616451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_219597924_219598093_219598181_219601234_219601441_219601640_219601716_219601987_219602084_219602467_219602576_219602704_219602777_219605607_219605735_219605955_219606060_219606194_219606291_219606475_219606518_219606711_219606859_219607052_219607138_219608046_219608431_219608582_219608789_219609096_219609214_219609362_219609541_219611603_219611835_219611954_219612059_219613127_219613226_219613751_219613931_219614160_219614243_219614475_219614547_219615093_219615342_219616043
transcript_87294.nnic	chr2	-	446	4	Intergenic	novelGene_33	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTTTGCAGTATTTTGT	-221372651	False	NA	NA	False	AATAAA	-19	NA	221372662	221286243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_221286382_221288371_221288506_221351285_221351369_221372571
transcript_87298.known	chr2	-	558	3	FSM	ENSG00000116106.12	ENST00000541600.5	558	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGATGAGAGCTTCACCCAA	-221572164	True	NA	NA	False	NA	NA	NA	221572358	221564105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_221564395_221568717_221568786_221572157
transcript_87299.known	chr2	+	1949	1	FSM	ENSG00000272944.1	ENST00000609776.1	1949	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCTGGGTTCTTTCATGT	221572472	True	NA	NA	False	CATAAA	-40	NA	221572505	221574454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_221572500_221574500
transcript_87300.nnic	chr2	+	1253	3	Antisense	novelGene_ENSG00000135903.20_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATACCGGCATGTGTGGC	NA	False	NA	NA	False	NA	NA	NA	222155114	222201832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_222155653_222193808_222193877_222201185
transcript_87307.known	chr2	+	378	1	FSM	ENSG00000235225.1	ENST00000431088.1	378	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	105	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCTGATCATCAAATACAT	NA	False	NA	NA	False	NA	NA	NA	222726456	222726834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222726500_222726800
transcript_87308.known	chr2	+	3147	16	FSM	ENSG00000123983.15	ENST00000392066.7	3147	16	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_2	56.3056736829326	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGAGATCTTGTGAATATA	NA	False	NA	13	True	AATAAA	-26	NA	222860941	222942222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222921279_222921431_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_87310.known	chr2	+	5341	15	FSM	ENSG00000123983.15	ENST00000681292.1	5341	15	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	142.951272560025	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTATAAAAGTTGAAGTTTC	222847692	True	NA	NA	False	AATAAA	-3	NA	222860983	222944609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_222861259_222887829_222887889_222908732_222909151_222916318_222916497_222918045_222918156_222919063_222919203_222922707_222922832_222923077_222923150_222924455_222924596_222927016_222927190_222928861_222928937_222930620_222930813_222933165_222933281_222934529_222934688_222941496
transcript_87312.nnic	chr2	-	1222	3	Antisense	novelGene_ENSG00000226539.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	1.5	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGATCTTGCATATTGA	NA	False	NA	-13	True	AATAAA	-16	NA	223724093	223704491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_223705356_223720872_223720995_223723857
transcript_87324.known	chr2	-	3986	5	FSM	ENSG00000152056.17	ENST00000396654.7	3986	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_2	3.74165738677394	59	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGGTGTGTTTTCATGAAT	-223836441	True	NA	2	True	AATAAA	-27	NA	223837582	223755325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223758751_223765212_223765351_223775900_223776010_223777690_223777870_223837447
transcript_87333.known	chr2	-	4607	12	FSM	ENSG00000085449.15	ENST00000233055.9	4607	12	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_3	54.965052758943	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGTTTGCCTAATATCAC	-223937785	True	NA	-15	True	AATAAA	-18	NA	223945335	223875347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223878731_223880123_223880233_223881941_223882073_223884647_223884750_223894233_223894340_223895503_223895631_223898957_223899071_223901182_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_87336.known	chr2	-	864	5	FSM	ENSG00000085449.15	ENST00000483061.1	864	5	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_2	49.2392120164407	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAATGCAAACCCTTCCTC	-223937785	True	NA	NA	False	NA	NA	NA	223945335	223900854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223901334_223905946_223906002_223912252_223912327_223917942_223918011_223945147
transcript_87342.known	chr2	+	1689	4	FSM	ENSG00000135900.4	ENST00000258383.4	1689	4	0	0	0	0	multi-exon	FALSE	canonical	3	403	junction_3	19.3964487013015	503	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGCATTTTAATTTGATA	223950110	True	NA	23	True	AATAAA	-23	NA	223957462	223967714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_223957652_223959533_223960003_223963755_223963935_223966862
transcript_87343.known	chr2	-	2226	9	FSM	ENSG00000135919.14	ENST00000409304.6	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_3	40.2235938225316	287	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGGAGACTTTTCCTATT	-224034465	True	NA	60	True	AATAAA	-34	NA	224039286	223975044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_223975905_223977543_223977628_223980310_223980398_223982680_223982782_223984751_223984951_223991802_223992001_223998114_223998343_224001641_224001923_224039098
transcript_87346.nnic	chr2	-	1696	2	NNC	ENSG00000124019.10	novel	2582	2	NA	NA	-31570	0	at_least_one_novel_splicesite	FALSE	canonical	2	11	junction_1	0	54	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTGAATAAGACATTGTG	-224432792	True	NA	NA	False	AATAAA	-18	NA	224433677	224378697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_224380209_224433492
transcript_87348.known	chr2	-	6756	16	FSM	ENSG00000036257.14	ENST00000264414.9	6756	16	0	0	0	0	multi-exon	TRUE	canonical	3	509	junction_15	74.6721426563407	93	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTCTGCAGTTGTGATT	-224582727	True	NA	NA	False	ATTAAA	-17	NA	224585363	224470149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_224474377_224478199_224478346_224481891_224482079_224495831_224495967_224497752_224497850_224500362_224500488_224502964_224503073_224503651_224503823_224505955_224506133_224506857_224507004_224511353_224511583_224513523_224513639_224514611_224514773_224535527_224535642_224557658_224557857_224584943
transcript_87350.known	chr2	+	3296	4	FSM	ENSG00000272622.2	ENST00000668519.1	3296	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATATTAGCTGTCCTCTTC	226800133	True	NA	NA	False	NA	NA	NA	226800145	226813741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_226800223_226807485_226807626_226808388_226808638_226810911
transcript_87351.known	chr2	+	5061	9	FSM	ENSG00000144468.17	ENST00000392062.7	5061	9	0	0	0	0	multi-exon	FALSE	canonical	2	17	junction_1	42.4291689171494	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGCTCATTTATACTGT	226834129	True	NA	NA	False	AATAAA	-23	NA	226836053	226999210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_226836088_226838072_226838155_226839408_226839628_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_87353.known	chr2	+	4883	7	FSM	ENSG00000144468.17	ENST00000341329.7	4883	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	21.3983384609387	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCATTTATACTGTCACCA	226835925	False	NA	NA	False	AATAAA	-28	NA	226835935	226999215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_226836088_226864603_226865127_226867185_226867319_226906792_226906882_226908821_226908879_226914207_226914352_226995430
transcript_87358.known	chr2	-	2110	9	FSM	ENSG00000236432.8	ENST00000662009.1	2110	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	5.7662812973354	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAGAGTCCTTTAACATGC	-227325216	False	NA	NA	False	AATAAA	-25	NA	227325226	227245704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_227246266_227259177_227259284_227264668_227265439_227265838_227265936_227268627_227268770_227279482_227279576_227281703_227281790_227305459_227305656_227325167
transcript_87373.known	chr2	+	1548	6	FSM	ENSG00000168958.20	ENST00000409565.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_1	190.423317899883	241	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTAGTGTATTTAATAAAC	227315508	True	NA	-11	True	TTTAAA	-22	NA	227325258	227357799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_8738.known	chr1	-	2098	10	FSM	ENSG00000156171.15	ENST00000484310.6	2098	10	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_9	34.8502971275216	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATGCATCTACAAAAACAGT	-111136388	True	NA	NA	False	ATTAAA	-24	NA	111140093	111117162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_87381.known	chr2	+	647	5	FSM	ENSG00000168958.20	ENST00000524634.5	647	5	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	221.509029161341	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTCAAAAATACTGTCTCAAC	227315520	True	NA	-35	True	NA	NA	NA	227325270	227357131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_87388.known	chr2	+	1085	7	FSM	ENSG00000168958.20	ENST00000354503.10	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_5	70.6588045940962	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTCCACACCCTGAAAATGT	227315499	True	NA	49	True	NA	NA	NA	227325249	227357215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_87389.known	chr2	+	1760	8	FSM	ENSG00000168958.20	ENST00000337110.11	1760	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_6	212.447448483965	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315517	True	NA	23	True	AATAAA	-16	NA	227325267	227357833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227342744_227342820_227355676_227355762_227356985
transcript_87390.known	chr2	+	1716	8	FSM	ENSG00000168958.20	ENST00000349901.11	1716	8	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	191.437952861804	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAACTGTCAACCAAAGA	227315525	True	NA	2	True	TTTAAA	-35	NA	227325275	227357812	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_87391.known	chr2	+	3524	6	FSM	ENSG00000168958.20	ENST00000460756.5	3524	6	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_4	74.0497130311793	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315514	True	NA	23	True	AATAAA	-16	NA	227325264	227357833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227330847_227332418_227332589_227340291_227340381_227355676_227355762_227356985
transcript_87392.known	chr2	+	1921	9	FSM	ENSG00000168958.20	ENST00000304593.14	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	221.343871329206	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTGTCTGTTGAAGGAT	227315500	True	NA	23	True	AATAAA	-16	NA	227325250	227357833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227330625_227330847_227332418_227332589_227340291_227340381_227347225_227347385_227352513_227352574_227355676_227355762_227356985
transcript_87393.known	chr2	+	1247	9	FSM	ENSG00000168958.20	ENST00000409616.5	1247	9	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	237.895164673433	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGCTGGAAATATAAAAGATT	227315511	True	NA	-15	True	NA	NA	NA	227325261	227357151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227325428_227328677_227328790_227329605_227329784_227330625_227330847_227332418_227332589_227340291_227340381_227352513_227352574_227355676_227355762_227356985
transcript_87394.known	chr2	-	5213	6	FSM	ENSG00000135917.16	ENST00000644224.2	5213	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	3.65513337649941	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTGCCTACTGTGGAGTA	-227717761	True	NA	NA	False	AATAAA	-24	NA	227718028	227683762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_227687574_227688165_227688308_227695888_227696082_227698735_227699565_227702168_227702321_227717942
transcript_87396.known	chr2	+	1683	13	FSM	ENSG00000123977.10	ENST00000309931.3	1683	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	3.10465600169953	25	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTGTACATGTGTATTT	227871577	True	NA	7	True	AATAAA	-15	NA	227871630	227924344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_227871730_227885350_227885424_227889855_227890001_227891254_227891314_227893794_227893918_227898181_227898282_227903001_227903110_227904928_227905036_227906235_227906339_227907137_227907253_227918779_227918857_227921398_227921562_227923933
transcript_87403.nic	chr2	-	851	3	NIC	ENSG00000232023.3	novel	718	4	NA	NA	-185	0	combination_of_known_junctions	FALSE	canonical	1	3	junction_2	2	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCTCACCACTCCTATT	-228568699	True	NA	NA	False	AATAAA	-21	NA	228568751	228483256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_228483499_228488682_228488794_228568253
transcript_87407.known	chr2	-	719	4	FSM	ENSG00000153827.14	ENST00000430954.5	719	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	33.2365260920372	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAAAAAGGACAGAGAGTTCT	-229921613	False	NA	NA	False	NA	NA	NA	229921662	229859227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_229859575_229860405_229860532_229879981_229880129_229921563
transcript_87411.nnic	chr2	+	712	5	NNC	ENSG00000153832.12	novel	3120	5	NA	NA	0	28045	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	61.794012654949	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCCAGCTTTTGGTGGAA	229921275	True	NA	NA	False	AATAAA	-2	NA	229922490	230041164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_229922610_229976240_229976350_229996750_229996924_230024880_230025003_230040975
transcript_87413.known	chr2	+	3120	5	FSM	ENSG00000153832.12	ENST00000373652.7	3120	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	64.9167736413325	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGCCATAATAATCTGAGT	NA	False	NA	NA	False	ATTAAA	-16	NA	229922301	230013109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_229922610_229932770_229932887_229976240_229976350_229996750_229996924_230010695
transcript_87415.nnic	chr2	+	688	4	NNC	ENSG00000153832.12	novel	2813	4	NA	NA	6	-14291	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	67.8871612800732	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGAATGGGAATCTGTTGC	229921281	True	NA	NA	False	ATTAAA	-22	NA	229922496	229997989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_229922610_229976240_229976350_229996750_229996924_229997696
transcript_87416.known	chr2	+	2813	4	FSM	ENSG00000153832.12	ENST00000283946.8	2813	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	63.2894584868251	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATCTGAGTGCCTTATTAC	229921287	True	NA	NA	False	ATTAAA	-26	NA	229922502	230013119	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_229922610_229976240_229976350_229996750_229996924_230010695
transcript_87419.known	chr2	-	1836	4	FSM	ENSG00000163053.11	ENST00000457406.5	1836	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	2.16024689946929	44	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACATTTTCCTTTT	-230068891	False	NA	NA	False	TATAAA	-27	NA	230068907	230045656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230046723_230049760_230049905_230059093_230059367_230068554
transcript_87420.known	chr2	+	629	4	FSM	ENSG00000079263.19	ENST00000538494.1	629	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	0.816496580927726	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATTGCAGACTGTGGGAGG	230230379	True	NA	NA	False	NA	NA	NA	230230413	230238927	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230230529_230237082_230237261_230238212_230238382_230238760
transcript_87423.known	chr2	-	1952	15	FSM	ENSG00000135899.19	ENST00000258382.10	1952	15	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	4.09641455969705	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCATGTCCATGTGTTTTA	-230219496	True	NA	NA	False	AATAAA	-18	NA	230219984	230176474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230176725_230177537_230177681_230178156_230178256_230183571_230183641_230185993_230186144_230200884_230200966_230202578_230202729_230207990_230208060_230209930_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_87432.nic	chr2	-	947	7	ISM	ENSG00000135899.19	ENST00000258382.10	1952	15	3	33447	3	2427	5prime_fragment	FALSE	canonical	3	13	junction_2	1.95078331845327	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTTTCTTCTGTAGAGGTC	-230219493	True	NA	NA	False	AAGAAA	-11	NA	230219981	230209921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_230210009_230211469_230211554_230212346_230212431_230212760_230213028_230214949_230215119_230216780_230216929_230219873
transcript_87441.known	chr2	+	1727	6	FSM	ENSG00000185404.17	ENST00000458341.1	1727	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	4.2614551505325	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGAAAGAGTCACATGTAC	230341898	True	NA	NA	False	NA	NA	NA	230342069	230372744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230342174_230357804_230357968_230358963_230359133_230361613_230361698_230370907_230370968_230371597
transcript_87443.known	chr2	+	1898	15	FSM	ENSG00000067066.17	ENST00000409341.5	1898	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.03263087820007	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACACTCTCAAACGTTAGT	230416226	False	NA	NA	False	AATAAA	-12	NA	230416246	230470517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230416329_230417590_230417666_230442936_230443100_230444177_230444347_230446818_230446903_230449087_230449151_230449560_230449711_230450171_230450256_230461261_230461415_230462434_230462519_230464066_230464151_230466300_230466355_230467119_230467216_230469042_230469097_230470014
transcript_87445.nnic	chr2	+	302	2	Antisense	novelGene_ENSG00000237758.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CGTTTAATCTTTTAACAGCC	NA	False	NA	NA	False	NA	NA	NA	230724751	230725480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_+_230724911_230725337
transcript_87448.nnic	chr2	-	404	2	Genic_Genomic	ENSG00000237758.1	novel	261	1	NA	NA	-77	391	multi-exon	FALSE	canonical	0	0	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATTAAACGAGGTAAACTAC	NA	False	NA	NA	False	AATAAA	-32	NA	230725480	230724751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr2_-_230724929_230725253
transcript_87453.known	chr2	+	2037	6	FSM	ENSG00000135916.16	ENST00000326427.11	2037	6	0	0	0	0	multi-exon	TRUE	canonical	3	4003	junction_2	225.072965946601	5552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230802810	True	NA	15	True	AATAAA	-17	NA	230864941	230879248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_87457.known	chr2	+	1888	5	FSM	ENSG00000135916.16	ENST00000326407.10	1888	5	0	0	0	0	multi-exon	FALSE	canonical	3	132	junction_3	1821.39074610584	3355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGACTTGAGTGTGGCTG	230802848	True	NA	15	True	AATAAA	-17	NA	230864979	230879248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230865146_230873416_230873558_230875619_230875809_230877399_230877551_230878007
transcript_87458.known	chr2	+	1889	5	FSM	ENSG00000135916.16	ENST00000335005.10	1889	5	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_1	1688.69244905637	3587	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTGACTTGAGTGTGGCT	230802816	True	NA	14	True	AATAAA	-16	NA	230864947	230879247	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_230865146_230875619_230875809_230876856_230876968_230877399_230877551_230878007
transcript_87461.known	chr2	-	3508	6	FSM	ENSG00000238062.6	ENST00000414876.5	3508	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.6	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTCTGTGTGGAGCTCC	NA	False	NA	NA	False	AAAAAG	-38	NA	230996031	230984367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_230986111_230986983_230988180_230991768_230991976_230992333_230992403_230995276_230995386_230995847
transcript_87462.known	chr2	+	3498	27	FSM	ENSG00000173692.14	ENST00000678112.1	3498	27	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_24	493.584026107412	467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTTTTAATAAATGTATCT	231040955	True	NA	-26	True	AATAAA	-43	NA	231056848	231172778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231152716_231152812_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231166380_231166492_231170565_231170722_231172534
transcript_87465.known	chr2	+	3323	25	FSM	ENSG00000173692.14	ENST00000308696.11	3323	25	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_6	83.0740027358472	1141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCAAGAGCCAGAGTCTTG	231040973	True	NA	23	True	AATAAA	-37	NA	231056866	231172827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_87473.known	chr2	+	3136	23	FSM	ENSG00000173692.14	ENST00000678679.1	3136	23	0	0	0	0	multi-exon	FALSE	canonical	1	23	junction_15	290.518960704677	493	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCCCACACCATGAAATGC	231040955	True	NA	-2	True	AATAAA	-12	NA	231056848	231172802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199_231165287_231165870_231166018_231170565_231170722_231172534
transcript_87474.nic	chr2	+	2743	22	ISM	ENSG00000173692.14	ENST00000676506.1	4089	23	-12	1942	3	0	5prime_fragment	FALSE	canonical	3	1187	junction_6	73.1256800266847	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGGTATAAATTGGTGGTCA	231040958	True	NA	NA	False	AAAAAG	-37	NA	231056851	231165287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231057042_231061266_231061311_231062247_231062322_231062505_231062676_231066905_231067112_231070024_231070169_231072188_231072416_231075510_231075572_231077033_231077163_231078658_231078748_231079535_231079615_231080140_231080315_231082882_231082995_231083566_231083764_231085018_231085115_231087116_231087182_231138735_231138851_231146239_231146357_231153563_231153667_231161339_231161510_231163634_231163728_231165199
transcript_87481.known	chr2	+	2148	21	FSM	ENSG00000135931.19	ENST00000682030.1	2148	21	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_3	52.495976036264	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194841	True	NA	-4	True	TTTAAA	-11	NA	231198673	231345181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214833_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_87482.known	chr2	+	2397	21	FSM	ENSG00000135931.19	ENST00000684718.1	2397	21	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	55.542123654034	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCATTCATTTTGAAAAGCA	231194843	True	NA	-3	True	TTTAAA	-12	NA	231198675	231345182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_87483.known	chr2	+	2091	20	FSM	ENSG00000135931.19	ENST00000683271.1	2091	20	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_8	50.3449596131406	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194802	True	NA	-4	True	TTTAAA	-11	NA	231198634	231345181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_87484.nic	chr2	+	2360	20	NIC	ENSG00000135931.19	novel	2397	21	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_1	70.2501663526584	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTTATCTCTTTATTTTT	231194798	True	NA	14	True	AATAAA	-17	NA	231198630	231345199	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_87490.nic	chr2	+	2085	16	ISM	ENSG00000135931.19	ENST00000684011.1	3702	19	-30	19220	11	0	5prime_fragment	FALSE	canonical	3	206	junction_1	27.7917653671411	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	231194772	True	NA	4	True	AATAGA	-3	NA	231198604	231278857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
transcript_87495.known	chr2	+	1941	12	FSM	ENSG00000135931.19	ENST00000682027.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_11	72.4557431177391	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAACAAAACCCTGAAGATT	231194798	True	NA	NA	False	NA	NA	NA	231198630	231260004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231259198
transcript_87500.known	chr2	+	950	9	FSM	ENSG00000135931.19	ENST00000482392.2	950	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	112.999723450989	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCGCACGTTGTCGAGC	231194803	True	NA	NA	False	NA	NA	NA	231198635	231239360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226776_231226799_231235223_231235382_231239291
transcript_87501.known	chr2	+	1089	9	FSM	ENSG00000135931.19	ENST00000440107.6	1089	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_1	33.5854786328854	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGTCTAGAAACTCC	231194813	True	NA	NA	False	NA	NA	NA	231198645	231240157	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942
transcript_87509.nic	chr2	+	762	4	ISM	ENSG00000135931.19	ENST00000482392.2	950	9	-31	24080	11	-24080	5prime_fragment	FALSE	canonical	3	206	junction_1	43.9267066322477	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTAGGCGTGTATGTCT	231194772	True	NA	NA	False	AATAAA	-18	NA	231198604	231215280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830
transcript_8751.nic	chr1	-	1473	10	NIC	ENSG00000156171.15	novel	2098	10	NA	NA	36	217	combination_of_known_junctions	FALSE	canonical	3	59	junction_9	64.490213632155	276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCATAGTTTTTTATACCT	-111140145	False	NA	-30	True	AATAAA	-16	NA	111140167	111117906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_87510.nic	chr2	+	983	4	ISM	ENSG00000135931.19	ENST00000684718.1	2397	21	-45	129902	0	-24080	5prime_fragment	FALSE	canonical	3	13	junction_1	134.69059193409	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATGTAGGCGTGTATGTCT	231194798	True	NA	NA	False	AATAAA	-18	NA	231198630	231215280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_231198946_231206197_231206290_231208126_231208253_231214830
transcript_87515.known	chr2	+	2261	16	FSM	ENSG00000135931.19	ENST00000683814.1	2261	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	66.4551979406678	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTTTAAGTCTCATTCTG	231194839	True	NA	4	True	AATAGA	-3	NA	231198671	231278857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381
transcript_87516.known	chr2	+	2216	19	FSM	ENSG00000135931.19	ENST00000683553.1	2216	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	80.367827234043	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194872	True	NA	-4	True	TTTAAA	-11	NA	231198704	231345181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198942_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_87517.known	chr2	+	2093	20	FSM	ENSG00000135931.19	ENST00000682002.1	2093	20	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	69.4696171058329	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAGCATTCATTTTGAAAAGC	231194798	True	NA	-4	True	TTTAAA	-11	NA	231198630	231345181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206199_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231331792_231331898_231344974
transcript_87518.known	chr2	+	2064	20	FSM	ENSG00000135931.19	ENST00000436339.6	2064	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_19	59.804297643401	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTATTTTTAAAATTCAAAAT	231194802	True	NA	-25	True	NA	NA	NA	231198634	231345160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231198699_231206197_231206290_231208126_231208253_231214830_231215002_231216637_231216794_231222727_231222821_231226773_231226799_231235223_231235382_231239942_231240042_231256585_231256621_231258990_231259103_231262305_231262399_231270981_231271073_231272954_231273079_231276635_231276776_231278381_231278459_231282058_231282134_231291352_231291444_231296197_231296254_231344974
transcript_87519.known	chr2	+	210	1	FSM	ENSG00000237039.1	ENST00000441378.1	210	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	104	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTGCTTGCTCGCTGGGTC	231256062	False	NA	NA	False	NA	NA	NA	231256096	231256306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231256100_231256300
transcript_87520.known	chr2	+	3539	2	FSM	ENSG00000156966.7	ENST00000287590.6	3539	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	115	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCGGTGTCTGAGGAGTTTT	231370699	True	NA	17	True	AATAAA	-19	NA	231395709	231401164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231395815_231397730
transcript_87521.known	chr2	-	504	1	FSM	ENSG00000172799.5	ENST00000423890.1	504	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	87	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GACACCAAAAAAGAAAAGAC	NA	False	NA	NA	False	AATGAA	-37	NA	231434426	231433922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231433900_231434400
transcript_87524.known	chr2	-	2155	14	FSM	ENSG00000115053.17	ENST00000454824.6	2155	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	1400.1145092646	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCTGTCCCTCTGCTTTCC	-231464183	False	NA	NA	False	NA	NA	NA	231464199	231455190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464159
transcript_87534.known	chr2	-	2653	14	FSM	ENSG00000115053.17	ENST00000679348.1	2653	14	0	0	0	0	multi-exon	FALSE	canonical	2	101	junction_13	1375.09158382463	6931	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATCATGGTTTTTGCTTCA	-231330865	True	NA	-29	True	AAGAAA	-16	NA	231464494	231454807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463313_231464335
transcript_87535.known	chr2	-	3389	12	FSM	ENSG00000115053.17	ENST00000676798.1	3389	12	0	0	0	0	multi-exon	FALSE	canonical	3	4027	junction_6	524.040484840691	2354	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACGTGTTACTTCCTAAAG	-231330889	True	NA	-20	True	ATTAAA	-17	NA	231464518	231454750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455625_231456009_231456137_231456630_231456765_231457000_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_87536.known	chr2	-	2674	14	FSM	ENSG00000115053.17	ENST00000678246.1	2674	14	0	0	0	0	multi-exon	TRUE	canonical	2	61	junction_1	1364.87128378532	2371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGACGTGTTACTTCCTAAA	-231330889	True	NA	-21	True	ATTAAA	-16	NA	231464518	231454751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455262_231455457_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_87537.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678828.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	2	115	junction_7	1371.58385963953	14750	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGTGTTACTTCCTAAAGAG	-231330860	True	NA	-18	True	ATTAAA	-19	NA	231464489	231454748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456137_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458345_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_87538.known	chr2	-	2666	14	FSM	ENSG00000115053.17	ENST00000678405.1	2666	14	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	1398.14484439816	15054	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTTTGTTTTGTTTTTGTT	-231464535	False	NA	68	True	NA	NA	NA	231464551	231454878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231455268_231455400_231455625_231456009_231456160_231456630_231456765_231457000_231457125_231457642_231457801_231458265_231458390_231459000_231459126_231460151_231460294_231460477_231460565_231460668_231460867_231461539_231462018_231463199_231463317_231464335
transcript_87551.nnic	chr2	-	1719	4	Fusion	ENSG00000181798.4_ENSG00000283491.1	novel	1334	3	NA	NA	-14	-4997	multi-exon	FALSE	canonical	2	5	junction_3	8.52447456836295	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGAGACTCCATGGCCATG	NA	False	NA	-6	True	AATAAA	-28	NA	231514410	231502086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr2_-_231503205_231509177_231509344_231513526_231513633_231514081
transcript_87554.known	chr2	-	1313	3	FSM	ENSG00000181798.4	ENST00000668648.2	1334	3	19	2	19	-2	multi-exon	FALSE	canonical	2	5	junction_2	9.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGTTGTGGCTCATACCCT	-231513315	True	NA	NA	False	AATAAA	-16	NA	231514366	231508421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231509344_231513526_231513633_231514081
transcript_87555.known	chr2	-	1281	3	FSM	ENSG00000181798.4	ENST00000313064.4	1325	3	44	0	33	0	multi-exon	FALSE	canonical	2	13	junction_2	5.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGGTGTTGTGGCTCATAC	-231513301	True	NA	NA	False	AATAAA	-13	NA	231514352	231508424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231509344_231513526_231513633_231514096
transcript_87565.known	chr2	+	735	6	FSM	ENSG00000187514.17	ENST00000409321.5	735	6	0	0	0	0	multi-exon	FALSE	canonical	1	11	junction_1	11027.9892745686	912	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTTGTATTTTTTATT	231707598	True	NA	NA	False	AAAAAG	-4	NA	231707683	231713108	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231707836_231708713_231708752_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_87568.known	chr2	+	784	5	FSM	ENSG00000187514.17	ENST00000466801.5	784	5	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	11521.9495312208	827	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CCAACCCAAACCATGAGAAT	231706864	False	NA	154	True	NA	NA	NA	231706894	231713013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231707229_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_87570.known	chr2	+	1108	5	FSM	ENSG00000187514.17	ENST00000448874.5	1108	5	0	0	0	0	multi-exon	FALSE	canonical	2	299	junction_1	11588.2318835748	1159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTGATGTATGTGTGA	231707616	False	NA	39	True	NA	NA	NA	231707629	231713465	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231707836_231711347_231711420_231711889_231711984_231712442_231712517_231712803
transcript_87584.known	chr2	+	933	5	FSM	ENSG00000187514.17	ENST00000409683.5	933	5	0	0	0	0	multi-exon	TRUE	canonical	1	80	junction_3	11844.4045940478	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AGCAAAAATGACAACAGAAA	231289389	True	NA	NA	False	NA	NA	NA	231708535	231713289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231708752_231711347_231711420_231711889_231711984_231712451_231712517_231712803
transcript_87585.known	chr2	+	1635	4	FSM	ENSG00000187514.17	ENST00000481928.1	1635	4	0	0	0	0	multi-exon	FALSE	canonical	3	27716	junction_2	447.621119549409	1514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAATTTTATTTTGCTG	231289383	True	NA	-35	True	NA	NA	NA	231708529	231713506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231708752_231711347_231711984_231712442_231712517_231712803
transcript_87586.known	chr2	+	1103	7	FSM	ENSG00000144524.18	ENST00000410024.5	1103	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	354.833020197138	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTGCAGTGAGTTCCAGA	231781659	False	NA	NA	False	NA	NA	NA	231781670	231807724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231781884_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_87591.known	chr2	+	806	5	FSM	ENSG00000144524.18	ENST00000409091.5	806	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	439.705796527633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACACCAAGGGCCCATTTCC	231781272	True	NA	NA	False	NA	NA	NA	231781684	231807695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231781884_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_87596.known	chr2	-	996	2	FSM	ENSG00000156973.14	ENST00000477748.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTGGAATTCCAGCCC	-231777760	True	NA	NA	False	NA	NA	NA	231781282	231778722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231779501_231781064
transcript_87597.known	chr2	-	1140	5	FSM	ENSG00000156973.14	ENST00000287600.9	1140	5	0	0	0	0	multi-exon	FALSE	canonical	3	254	junction_4	11.9660979437743	2471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATGGCACTGCTTTTATCT	-231777760	True	NA	-5	True	ATTAAA	-32	NA	231781282	231732432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231733034_231737186_231737293_231738012_231738139_231739099_231739189_231781064
transcript_87598.known	chr2	+	2513	7	FSM	ENSG00000144524.18	ENST00000350033.8	2513	7	0	0	0	0	multi-exon	FALSE	canonical	3	898	junction_3	75.4160681375881	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCCTCATTGGAAATTCAT	231779635	True	NA	8	True	AATAAA	-22	NA	231786444	231809253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231794262_231794352_231796105_231796309_231798858_231798965_231807486
transcript_87599.known	chr2	+	1935	6	FSM	ENSG00000144524.18	ENST00000412922.6	1935	6	0	0	0	0	multi-exon	TRUE	canonical	1	34	junction_3	384.978648758603	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCACCTGGTTGGAGGGT	231779635	True	NA	50	True	NA	NA	NA	231786444	231808764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231786539_231788554_231788733_231791732_231791809_231796105_231796309_231798858_231798965_231807486
transcript_876.known	chr1	-	1832	10	FSM	ENSG00000131591.18	ENST00000421241.7	1832	10	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_9	11.8800590263321	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCGTTCCGAGCTGCTCT	-1115098	True	NA	-11	True	TATAAA	-16	NA	1116089	1081822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1082988_1084352_1084384_1084480_1084507_1085877_1086013_1087138_1087205_1087501_1087598_1090352_1090429_1091471_1091566_1091990_1092104_1116059
transcript_87600.known	chr2	+	668	4	FSM	ENSG00000144524.18	ENST00000449174.1	668	4	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_3	416.816506391002	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTCGTGTCAATATTTGTT	231796150	True	NA	10	True	AATACA	-21	NA	231796186	231808724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231796309_231798858_231798965_231807486_231807623_231808420
transcript_87601.known	chr2	-	1055	3	FSM	ENSG00000163273.4	ENST00000409852.2	1055	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	1	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTCTTTATTTACTTGTTG	-231926322	True	NA	NA	False	AAAAAG	-24	NA	231926396	231921808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_231922316_231925404_231925716_231926159
transcript_87602.known	chr2	+	3366	21	FSM	ENSG00000144535.20	ENST00000325385.12	3366	21	0	0	0	0	multi-exon	TRUE	canonical	3	32	junction_7	12.8237085119711	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGAGAGCGCCCCCATCA	231960562	True	NA	4	True	ATTAAA	-19	NA	231961712	232337192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618_232130720_232136471_232136720_232163458_232163633_232210325_232210406_232238532_232238646_232249238_232249347_232263206_232263441_232300039_232300120_232329812_232329997_232330689_232330777_232333839_232333988_232334368_232334500_232334630_232334736_232335772_232335875_232336468
transcript_87604.known	chr2	+	2048	7	FSM	ENSG00000144535.20	ENST00000409401.7	2048	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	11.6440256498057	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGTTTGACCTGTGCA	231961670	False	NA	NA	False	AATGAA	-35	NA	231961683	232131890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_231961766_232014834_232014980_232015513_232015672_232024276_232024331_232029978_232030081_232087486_232087722_232130618
transcript_8761.known	chr1	+	2251	9	FSM	ENSG00000134255.15	ENST00000545121.5	2251	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	55.0407519479885	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTTGTGATGTGTCTTG	111139582	False	NA	12	True	AATAAA	-21	NA	111139626	111185102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111139762_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_87613.known	chr2	+	3525	8	FSM	ENSG00000135930.15	ENST00000409514.5	3525	8	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_7	578.803057690469	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCAGGTCGTGGACTTGTC	232531504	True	NA	25	True	AATAAA	-18	NA	232550682	232583642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232574262_232574342_232580903
transcript_87623.known	chr2	+	967	7	FSM	ENSG00000135930.15	ENST00000258416.8	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	1059	junction_6	116.896915651735	5411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGTCTCATGCTCTTGCT	232531510	True	NA	15	True	AATAAA	-14	NA	232550688	232569210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_87625.known	chr2	+	3448	7	FSM	ENSG00000135930.15	ENST00000409098.5	3448	7	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_6	406.824969188908	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGGTCGTGGACTTGTCAA	232531504	True	NA	27	True	AATAAA	-20	NA	232550682	232583644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_87639.known	chr2	+	1014	6	FSM	ENSG00000135930.15	ENST00000409495.6	2693	6	0	1679	0	322	multi-exon	FALSE	canonical	3	1202	junction_5	75.1345459825239	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTTTTCTTTTTCTTGCTG	232531510	True	NA	NA	False	AATGAA	-8	NA	232550688	232567527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883_232558019_232564246_232564352_232566828_232566982_232567077
transcript_87643.known	chr2	+	797	6	FSM	ENSG00000135930.15	ENST00000409322.5	797	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	462.961337478628	677	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCTGAGATCACTTAATAAAT	232531513	True	NA	-17	True	NA	NA	NA	232550691	232569178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232568944
transcript_87645.known	chr2	+	604	6	FSM	ENSG00000135930.15	ENST00000409394.5	604	6	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_2	559.087327704716	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCAATAATCCTTTTCTGTA	232531525	True	NA	11	True	AATACA	-29	NA	232550703	232580956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077_232567215_232580903
transcript_87651.known	chr2	+	1372	5	FSM	ENSG00000135930.15	ENST00000409167.8	2550	5	0	1178	0	815	multi-exon	FALSE	canonical	3	137	junction_2	517.334756226566	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTTTCTCCATCTGTAAAG	232531510	True	NA	NA	False	NA	NA	NA	232550688	232568020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232564246_232564352_232566828_232566982_232567077
transcript_87654.known	chr2	+	1878	4	FSM	ENSG00000115468.13	ENST00000264059.8	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_3	4.78423336480244	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTACAGCTATTTCTTTTT	232633064	True	NA	8	True	AATAAA	-20	NA	232633603	232682776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232634007_232662801_232662950_232672308_232672444_232681584
transcript_87655.known	chr2	+	1110	3	FSM	ENSG00000135930.15	ENST00000498242.5	1110	3	0	0	0	0	multi-exon	FALSE	canonical	3	1289	junction_2	11	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAATGAAATCTCTAATAA	232531512	True	NA	NA	False	CATAAA	-25	NA	232550690	232558824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232550745_232556415_232556531_232557883
transcript_87656.known	chr2	+	7816	29	FSM	ENSG00000204120.16	ENST00000373563.9	7816	29	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	31.9149859240234	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATATTCTGTACTGTCCTTC	232690740	True	NA	NA	False	ATTAAA	-24	NA	232697330	232860605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007_232791171_232791257_232791447_232794747_232794945_232796061_232796222_232806490_232806658_232809719_232809812_232811243_232811352_232812390_232812492_232815636_232815738_232816870_232817033_232819826_232819986_232832856_232833094_232839848_232839972_232844045_232844256_232844368_232844575_232845731_232845887_232847347_232847572_232850261_232850410_232856792
transcript_8766.known	chr1	+	2203	9	FSM	ENSG00000134255.15	ENST00000357172.9	2203	9	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_4	20.3147114180832	381	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTGATGTGTCTTGTG	111137574	True	NA	14	True	AATAAA	-23	NA	111140222	111185104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111140308_111147641_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182319_111182798_111182958_111183461_111183588_111184190
transcript_87662.nic	chr2	+	1287	11	ISM	ENSG00000204120.16	ENST00000373563.9	7816	29	-54	69466	-22	-3650	5prime_fragment	TRUE	canonical	3	105	junction_1	20.2573443471744	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAGAGAAAACAGATAG	232690686	True	NA	NA	False	AAGAAA	-1	NA	232697276	232791139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_232697393_232703423_232703490_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_87664.nic	chr2	+	1188	10	NIC	ENSG00000204120.16	novel	5976	31	NA	NA	0	-3650	combination_of_known_junctions	FALSE	canonical	3	40	junction_1	37.3482113211448	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGGAGAGAAAACAGATAG	232690719	True	NA	NA	False	AAGAAA	-1	NA	232697309	232791139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_232697393_232735154_232735239_232747614_232747745_232748986_232749083_232756222_232756335_232760479_232760592_232761395_232761437_232787149_232787330_232790697_232790916_232791007
transcript_87671.known	chr2	+	1196	6	FSM	ENSG00000204120.16	ENST00000464805.5	1196	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.7608139294157	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACATTCTTATAGTTACAT	232690779	True	NA	NA	False	TATAAA	-13	NA	232697369	232736645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232734416_232734487_232735154_232735239_232735762
transcript_87675.known	chr2	+	1116	5	FSM	ENSG00000204120.16	ENST00000489328.1	1116	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	45.6316775935314	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTCTTATAGTTACATCTT	232690792	True	NA	NA	False	TATAAA	-16	NA	232697382	232736648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232700584_232700655_232703423_232703490_232735154_232735239_232735762
transcript_87677.known	chr2	+	529	5	FSM	ENSG00000204120.16	ENST00000464402.5	529	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	42.4345083628879	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAATAGATAAATTGGATT	232690740	True	NA	-81	True	NA	NA	NA	232697330	232735961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232724573_232724692_232735154_232735239_232735762
transcript_87678.known	chr2	+	567	5	FSM	ENSG00000204120.16	ENST00000490612.5	567	5	0	0	0	0	multi-exon	TRUE	canonical	3	5	junction_4	39.2173431022552	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTAGTAACTCTATTTG	232690740	True	NA	-5	True	AATAAA	-12	NA	232697330	232736037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232734416_232734487_232735154_232735239_232735752
transcript_87680.known	chr2	+	685	4	FSM	ENSG00000204120.16	ENST00000492910.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_3	48.7259912389909	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTAATGCTGTACTTGTTTT	232690739	True	NA	NA	False	NA	NA	NA	232697329	232736234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_232697393_232703423_232703490_232735154_232735239_232735762
transcript_87686.nic	chr2	-	1735	8	NIC	ENSG00000066248.15	novel	3184	15	NA	NA	-39	0	combination_of_known_junctions	FALSE	canonical	3	24	junction_1	8.48287590817344	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGATGAAGGTCTACTCTT	-232890721	True	NA	-14	True	AATAAA	-1	NA	232891019	232878700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_232879680_232881145_232881251_232882185_232882266_232883310_232883467_232883980_232884145_232885279_232885370_232888032_232888108_232890933
transcript_87692.nnic	chr2	-	943	4	Antisense	novelGene_ENSG00000168918.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	0.942809041582063	9	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTATACAAATAGTACAT	-233141026	True	NA	NA	False	AATAAA	-30	NA	233141083	233121506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_233122243_233123580_233123627_233138621_233138670_233140970
transcript_87695.nnic	chr2	-	519	2	Antisense	novelGene_ENSG00000168918.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGTCTGTAATCCTTT	-233141081	True	NA	NA	False	AATAAA	-21	NA	233141138	233140498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_233140850_233140970
transcript_87697.known	chr2	+	3298	18	FSM	ENSG00000085978.22	ENST00000392017.9	3298	18	0	0	0	0	multi-exon	TRUE	canonical	3	46	junction_8	31.4553564018401	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCCATGCCTCTTGGTGATT	233248100	True	NA	19	True	AATAAA	-25	NA	233251672	233295669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233273720_233273778_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_87698.known	chr2	+	3213	17	FSM	ENSG00000085978.22	ENST00000392020.8	3213	17	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_7	18.0449741964349	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCTTGGTGATTATTTT	233248133	True	NA	24	True	AATAAA	-30	NA	233251705	233295674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_233251943_233256101_233256196_233263129_233263236_233263991_233264066_233264891_233265144_233270001_233270068_233272965_233273053_233274675_233274779_233277567_233277674_233281104_233281176_233282681_233282754_233289853_233289975_233290247_233290354_233292127_233292278_233292386_233292435_233293255_233293358_233294256
transcript_87707.known	chr2	-	933	5	FSM	ENSG00000085982.15	ENST00000484528.1	933	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	3.93700393700591	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTGTGGCCTCATGTGAGA	-233566474	True	NA	NA	False	AATAGA	-25	NA	233566782	233556585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233557020_233559810_233559925_233562735_233562804_233565355_233565574_233566683
transcript_87709.known	chr2	-	628	4	FSM	ENSG00000085982.15	ENST00000443711.2	628	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	8.17856276425687	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATTTTGTTTGTTATTGTG	-233566426	True	NA	NA	False	AATAAA	-17	NA	233566734	233560742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233561034_233562735_233562804_233565355_233565574_233566683
transcript_8771.known	chr1	-	1872	9	FSM	ENSG00000156171.15	ENST00000539140.6	1872	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	86.0405972492056	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111140181	False	NA	-4	True	AATAAA	-13	NA	111140203	111117332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111140037
transcript_87714.known	chr2	-	3157	9	FSM	ENSG00000123485.12	ENST00000411486.7	3157	9	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_5	46.9068225314826	213	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGAGTTTGGGTTTTTTTT	-233841490	True	NA	-4	True	AGTAAA	-18	NA	233854535	233836701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233849762_233849860_233852564_233852621_233853843_233853911_233854383
transcript_87718.known	chr2	-	3027	7	FSM	ENSG00000123485.12	ENST00000432087.5	3027	7	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_4	210.424504804508	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGAGTTTGGGTTTTTTTTT	-233841521	True	NA	-3	True	AGTAAA	-19	NA	233854566	233836700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233837653_233840608_233842206_233844204_233844284_233845727_233845821_233852564_233852621_233853843_233853911_233854383
transcript_87724.nic	chr2	-	1551	3	ISM	ENSG00000123485.12	ENST00000453122.1	634	7	-40	9213	-9	-7104	5prime_fragment	FALSE	canonical	3	581	junction_2	18.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTAGAAATGGTTTTCAGA	-233841530	True	NA	-21	True	AATAAA	-20	NA	233854575	233851328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_233852621_233853843_233853911_233854383
transcript_87725.nic	chr2	-	290	3	ISM	ENSG00000123485.12	ENST00000453122.1	634	7	-40	10474	-9	-8365	5prime_fragment	FALSE	canonical	3	581	junction_2	18.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GGAAAGAAACGAAGGAGAGA	-233841530	True	NA	NA	False	AATAAA	-1	NA	233854575	233852589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_233852621_233853843_233853911_233854383
transcript_87726.known	chr2	-	806	7	FSM	ENSG00000123485.12	ENST00000454020.1	806	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	214.302550925866	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGAGCCAGACGTTCTC	-233841429	True	NA	NA	False	AAAACA	-6	NA	233854474	233841850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233842206_233844204_233844284_233845727_233845821_233847396_233847462_233852564_233852621_233853843_233853911_233854383
transcript_87727.known	chr2	-	2032	2	FSM	ENSG00000224287.2	ENST00000438684.1	2032	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	210	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAACTTGGAGTCATAACTA	NA	False	NA	NA	False	AATAAA	-24	NA	233868444	233865436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_233867351_233868326
transcript_87730.nnic	chr2	+	790	4	NNC	ENSG00000280744.1	novel	331	3	NA	NA	-118	5709	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0.942809041582063	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTGAAAATCAGCAATTCTTA	NA	False	NA	NA	False	ATTAAA	-17	NA	234682549	234723473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_234682769_234695648_234695749_234717634_234717765_234723132
transcript_87736.nic	chr2	-	904	5	NIC	ENSG00000235726.7	novel	890	6	NA	NA	-8	130	combination_of_known_junctions	TRUE	canonical	1	1	junction_1	4.94974746830583	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAAATGTGTCCTTATA	-234888594	True	NA	NA	False	AATAAA	-13	NA	234888784	234803677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_234804087_234817241_234817379_234824932_234825114_234887776_234887818_234888648
transcript_87744.nnic	chr2	-	889	4	NIC	ENSG00000235726.7	novel	890	6	NA	NA	-104	130	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	6.0184900284226	15	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTGAAATGTGTCCTTATA	NA	False	NA	NA	False	AATAAA	-13	NA	234888906	234803677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_234804087_234824932_234825114_234887776_234887818_234888648
transcript_87745.nic	chr2	-	1150	4	NIC	ENSG00000235726.7	novel	890	6	NA	NA	-104	540	combination_of_known_junctions	FALSE	canonical	3	6	junction_1	3.29983164553722	26	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACAGTCCGGAGACTG	NA	False	NA	NA	False	NA	NA	NA	234888906	234816708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_234817379_234824932_234825114_234887776_234887818_234888648
transcript_87747.nnic	chr2	-	822	4	NNC	ENSG00000235726.7	novel	696	2	NA	NA	-104	-6580	at_least_one_novel_splicesite	TRUE	canonical	3	7	junction_1	2.86744175568088	8	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGCTGAGCTTGGACCTTTC	NA	False	NA	NA	False	NA	NA	NA	234888906	234823862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_-_234824205_234824932_234825114_234887776_234887818_234888648
transcript_87751.known	chr2	+	612	2	FSM	ENSG00000130147.16	ENST00000484097.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCTGATTACAGAAACAAT	234949393	True	NA	NA	False	AATAAA	-16	NA	234952034	234953190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_234952171_234952714
transcript_87752.nnic	chr2	+	715	3	FSM	ENSG00000233611.4	ENST00000692928.1	698	3	-21	4	3	-4	multi-exon	FALSE	canonical	3	22	junction_2	20	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCGACCCGATTCTTTGAAGC	236166472	True	NA	24	True	GATAAA	-25	NA	236167420	236169796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236167670_236169232_236169385_236169482
transcript_87753.nnic	chr2	+	665	3	FSM	ENSG00000233611.4	ENST00000685281.1	676	3	3	8	3	-8	multi-exon	TRUE	canonical	3	45	junction_2	8.5	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATCGACCCGATTCTTTG	236166472	True	NA	20	True	GATAAA	-21	NA	236167420	236169792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236167670_236169232_236169385_236169528
transcript_87754.nnic	chr2	+	968	2	FSM	ENSG00000233611.4	ENST00000686834.1	961	2	-10	3	-10	-3	multi-exon	FALSE	canonical	3	36	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCCCAGTCTCAGGTATGT	236166483	True	NA	6	True	AATAAA	-18	NA	236167431	236221636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236167670_236220906
transcript_87755.known	chr2	-	896	2	FSM	ENSG00000168505.7	ENST00000465889.1	896	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCACACCAGAAGACACGCTA	-236166654	False	675	-70	True	AATATA	-45	NA	236167329	236165733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_236166438_236167137
transcript_87757.known	chr2	-	3215	19	FSM	ENSG00000132321.17	ENST00000409907.8	3215	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_8	5.396901259971	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGACTCGGTAATTTGGTTG	-236506920	True	NA	-3	True	AATAAA	-16	NA	236507476	236324150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_236324784_236331358_236331598_236338204_236338383_236344556_236344644_236363779_236363980_236368193_236368302_236377102_236377186_236380568_236380634_236391975_236392072_236392243_236392351_236399412_236399489_236419148_236419272_236441039_236441125_236465504_236465711_236486828_236486901_236487999_236488192_236493767_236493888_236497162_236497488_236507256
transcript_87766.known	chr2	+	713	2	FSM	ENSG00000144476.6	ENST00000447924.1	713	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGAGCTGGTCTCCGTTG	236567711	True	NA	NA	False	NA	NA	NA	236567786	236581097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236567842_236580439
transcript_87767.known	chr2	+	2015	2	FSM	ENSG00000144476.6	ENST00000272928.4	2015	2	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATCAAGTCTCAGTTTTC	236569772	True	NA	9	True	AATAAA	-20	NA	236569824	236582354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_236569925_236580439
transcript_87771.known	chr2	+	1654	9	FSM	ENSG00000198612.11	ENST00000392008.6	1654	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	515.075707420763	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAACTTAAGGTTATAACAG	237075185	True	NA	-48	True	NA	NA	NA	237085881	237098618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237086043_237086731_237086797_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_87775.known	chr2	+	3438	8	FSM	ENSG00000198612.11	ENST00000354371.7	3438	8	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_7	67.4555030961832	1973	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTATTTCCAATGTGTTCT	237075192	True	NA	17	True	AATAAA	-25	NA	237085888	237100474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237086043_237087126_237087198_237088604_237088654_237089861_237089995_237094089_237094198_237095821_237095885_237096821_237096870_237097662
transcript_87792.known	chr2	+	3744	16	FSM	ENSG00000115648.14	ENST00000264605.8	3744	16	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_8	10.0323919824182	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCCTAGCAGATGGCTAT	237486734	True	NA	NA	False	AATAAA	-27	NA	237487250	237555322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237534563_237534648_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_87793.known	chr2	+	2332	15	FSM	ENSG00000115648.14	ENST00000338530.8	2332	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	6.60859057498307	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486734	True	NA	21	True	AAAAAG	-21	NA	237487250	237553994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237519909_237520030_237525600_237525806_237527376_237527517_237540347_237540534_237540801_237540958_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_87796.known	chr2	+	2031	13	FSM	ENSG00000115648.14	ENST00000409373.5	2031	13	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	10.5751280528102	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATATGTGTATTCTTGAT	237486759	True	NA	21	True	AAAAAG	-21	NA	237487275	237553994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237487438_237493402_237493537_237510573_237510796_237510988_237511102_237518538_237518649_237525600_237525806_237527376_237527517_237540347_237540534_237542566_237542660_237546605_237546684_237549220_237549279_237552336_237552438_237553565
transcript_87799.known	chr2	-	1077	5	FSM	ENSG00000124839.13	ENST00000409822.1	1077	5	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	308.586596436073	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTGGCAGCCTCTGGACAG	-237590750	False	NA	NA	False	NA	NA	NA	237590780	237574737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237590466
transcript_87809.known	chr2	+	589	3	FSM	ENSG00000234949.2	ENST00000470375.1	589	3	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGAGCTGGGCGGATCAC	NA	False	NA	NA	False	AAAAAG	-44	NA	237591019	237592006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237591268_237591565_237591772_237591871
transcript_87816.nnic	chr2	+	1172	2	NIC	ENSG00000234949.2	novel	1301	3	NA	NA	-27	4	combination_of_known_splicesites	FALSE	canonical	2	9	junction_1	0	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCGGGTGCAGTGGCTCA	237590990	True	NA	NA	False	AATAAA	-20	NA	237591141	237595985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237591268_237594939
transcript_87817.known	chr2	-	1511	6	FSM	ENSG00000124839.13	ENST00000414278.1	1511	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	293.147062069535	338	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTCCAAAAATTAAATTGC	-237585921	True	NA	-36	True	NA	NA	NA	237590715	237574354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237586041_237586158_237590466
transcript_87818.known	chr2	-	1603	6	FSM	ENSG00000124839.13	ENST00000264601.8	1603	6	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_4	148.769082809568	3859	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGGCTTTTAGAAGTTTTT	-237585940	True	NA	-7	True	ATTAAA	-14	NA	237590734	237574325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237578003_237578156_237585997_237586158_237590466
transcript_87819.known	chr2	-	1792	5	FSM	ENSG00000124839.13	ENST00000392001.6	1792	5	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_3	289.626807288276	3245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTTTAGAAGTTTTTGAGG	-237591055	False	NA	-3	True	ATTAAA	-18	NA	237591071	237574321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237575129_237575386_237575481_237577256_237577383_237585997_237586158_237590466
transcript_87820.known	chr2	+	1301	3	FSM	ENSG00000234949.2	ENST00000452801.1	1301	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGGGCCGGGTGCAGTGG	237591017	True	NA	NA	False	AATAAA	-16	NA	237591168	237595981	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237591268_237591871_237592032_237594939
transcript_87821.known	chr2	-	587	3	FSM	ENSG00000124839.13	ENST00000416106.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	429.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGGCCTCCTTCCCATCCT	-237585937	True	NA	NA	False	NA	NA	NA	237590731	237585402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_237585565_237585997_237586158_237590466
transcript_87822.nic	chr2	+	2120	13	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	178.562372389407	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237623522	True	NA	21	True	ATTAAA	-23	NA	237627594	237780315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237751199_237751272_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_87825.nic	chr2	+	2048	12	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	8	0	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	159.195965312884	82	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTGGTTCTAATTTTT	237623522	True	NA	21	True	ATTAAA	-23	NA	237627594	237780315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237769942_237769993_237772080_237772199_237772865_237772946_237774357_237774463_237779421
transcript_87828.nic	chr2	+	1639	8	NIC	ENSG00000124831.19	novel	4092	24	NA	NA	8	-1521	combination_of_known_junctions	FALSE	canonical	3	265	junction_1	226.672108778207	138	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAGAAGAAAAAATCCCCAG	237623522	True	NA	NA	False	AAAAAG	-6	NA	237627594	237763440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_237627741_237708543_237708631_237748363_237748400_237749198_237749325_237753308_237753480_237756094_237756188_237760063_237760206_237762602
transcript_87830.known	chr2	+	857	3	FSM	ENSG00000132329.11	ENST00000404910.6	857	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGACTTACCTCTGGAAAG	237858879	True	NA	-92	True	NA	NA	NA	237858892	237912010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237859128_237877223_237877363_237911527
transcript_87831.known	chr2	+	823	3	FSM	ENSG00000132329.11	ENST00000254661.5	823	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTGGAAAGACTCATTATCT	237859585	True	NA	4	True	ATTAAA	-16	NA	237859622	237912106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237859728_237877223_237877363_237911527
transcript_87835.nic	chr2	+	739	7	ISM	ENSG00000258984.5	ENST00000449191.1	951	11	-61	26624	0	-26624	5prime_fragment	FALSE	canonical	3	7	junction_5	155.568223690515	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGGGCTTCTGAAGAGTTG	237962165	True	NA	12	True	CATAAA	-18	NA	237967013	238041546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238035877_238035941_238041287
transcript_87841.known	chr2	+	2902	19	FSM	ENSG00000258984.5	ENST00000449891.5	2902	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	151.635985907773	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	237962165	True	NA	10	True	AATAAA	-16	NA	237967013	238099412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238030555_238030614_238032221_238032255_238035877_238035941_238057157_238057251_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_87843.known	chr2	+	924	9	FSM	ENSG00000184182.19	ENST00000409953.5	924	9	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	136.705374345707	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTGGATGCAAAATCTCT	237962232	True	NA	7	True	NA	NA	NA	237967080	238041770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_87846.known	chr2	+	831	8	FSM	ENSG00000184182.19	ENST00000445676.5	831	8	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	184.553847017556	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTTTCTGCACAAGCGAT	237962179	True	NA	2	True	NA	NA	NA	237967027	238041692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237987962_237987993_237994743_237994810_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_87852.known	chr2	+	1138	9	FSM	ENSG00000184182.19	ENST00000409332.5	1138	9	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	139.181929053308	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTAATTTGTACAATTCA	237962233	True	NA	-13	True	NA	NA	NA	237967081	238041917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_87853.known	chr2	+	837	9	FSM	ENSG00000184182.19	ENST00000409633.5	837	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	138.4304879714	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTGGGCTTCTGAAGAGTT	237962165	True	NA	11	True	CATAAA	-17	NA	237967013	238041545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238041287
transcript_87854.known	chr2	+	984	11	FSM	ENSG00000184182.19	ENST00000417231.5	984	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	165.945894797069	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTTGGGCTTCTGAAGA	237962177	True	NA	8	True	CATAAA	-14	NA	237967025	238041542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237973648_237973748_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_87855.known	chr2	+	760	9	FSM	ENSG00000184182.19	ENST00000455999.5	760	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_5	138.481722620713	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGACCATCTTCATGACTG	237962169	True	NA	-54	True	NA	NA	NA	237967017	238041480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238030555_238030614_238032221_238032255_238035877_238035941_238041287
transcript_87856.known	chr2	+	803	8	FSM	ENSG00000184182.19	ENST00000433241.5	803	8	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_6	141.790302192775	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTATAGGCTGTTGGTGAAA	237962231	True	NA	10	True	NA	NA	NA	237967079	238041605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_237967133_237973091_237973226_237987962_237987993_237994743_237994810_238016565_238016634_238025341_238025413_238035877_238035941_238041287
transcript_87858.known	chr2	+	2450	12	FSM	ENSG00000132330.18	ENST00000254663.12	2450	12	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_9	71.2726113171598	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGGGATCCTGTGGTTTC	238055528	True	NA	11	True	AATAAA	-17	NA	238061000	238099413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_87863.nic	chr2	+	1513	10	ISM	ENSG00000132330.18	ENST00000254663.12	2450	12	-24	4564	11	0	5prime_fragment	FALSE	canonical	3	237	junction_9	63.3721128838074	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	238055504	True	NA	6	True	ATTAAA	-18	NA	238060976	238094849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238091255_238093860_238093945_238094419
transcript_87865.known	chr2	+	5668	11	FSM	ENSG00000132330.18	ENST00000480357.5	5668	11	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	146.910891359354	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGGGGATCCTGTGGTTT	238060911	False	NA	10	True	AATAAA	-16	NA	238060927	238099412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782_238073848_238081708_238081837_238082044_238082210_238083247_238083355_238091217_238094523_238096800_238096877_238098201
transcript_87870.known	chr2	+	1774	8	FSM	ENSG00000132330.18	ENST00000409736.6	1774	8	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_4	28.8663351695786	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAAGAGTGTGTGTTTGTTT	238055558	True	NA	36	True	NA	NA	NA	238061030	238092083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238083247_238083355_238091217
transcript_87878.nic	chr2	+	1108	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	11	-3	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	133.973152368508	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTCTGTGTCTCTTC	238055504	True	NA	8	True	TTTAAA	-10	NA	238060976	238091470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_87880.nic	chr2	+	1697	7	NIC	ENSG00000132330.18	novel	1774	8	NA	NA	11	-24	combination_of_known_junctions	FALSE	canonical	3	48	junction_6	133.973152368508	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTGTGGCTACATTTACT	238055504	True	NA	12	True	NA	NA	NA	238060976	238092059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238081708_238081837_238082044_238082210_238091217
transcript_87883.known	chr2	+	585	7	FSM	ENSG00000132330.18	ENST00000412508.6	585	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	139.046055519585	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCTACGGTGTCCCCTTCG	238055581	True	NA	NA	False	NA	NA	NA	238061053	238098219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238093860_238093945_238094419_238094523_238096800_238096877_238098201
transcript_87895.nic	chr2	+	649	5	ISM	ENSG00000132330.18	ENST00000480357.5	5668	11	49	25543	11	4033	5prime_fragment	FALSE	canonical	3	37	junction_4	159.281197886003	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTTCTTAGTATTTTTT	238055504	True	NA	NA	False	AGTAAA	-18	NA	238060976	238073869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296_238069478_238073782
transcript_87898.known	chr2	+	807	4	FSM	ENSG00000132330.18	ENST00000416757.1	807	4	0	0	0	0	multi-exon	FALSE	canonical	3	383	junction_3	14.7044966667418	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGTACGCCTGCAAATAGGC	238055618	True	NA	NA	False	AATAAA	-16	NA	238061090	238069836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064_238068166_238069296
transcript_87902.known	chr2	+	458	3	FSM	ENSG00000132330.18	ENST00000497256.5	458	3	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_2	2	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTTTTGCTACATTTTCA	238055493	True	NA	4	True	AATAAA	-17	NA	238060965	238068231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356_238064470_238068064
transcript_87904.known	chr2	+	770	2	FSM	ENSG00000132330.18	ENST00000487197.1	770	2	0	0	0	0	multi-exon	FALSE	canonical	3	416	junction_1	0	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGATGATGATGAACTAAAT	238055640	True	NA	NA	False	GATAAA	-13	NA	238061112	238065095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238061144_238064356
transcript_87905.known	chr2	+	415	2	FSM	ENSG00000132330.18	ENST00000440143.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTGAAGTGTCAAGCTGCAG	238082080	True	NA	61	True	NA	NA	NA	238082100	238091523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238082210_238091217
transcript_87906.known	chr2	+	660	4	FSM	ENSG00000132330.18	ENST00000433750.1	660	4	0	0	0	0	multi-exon	FALSE	canonical	3	237	junction_3	69.2290882986817	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTTGGCAGTTTTAATT	238083225	False	NA	6	True	ATTAAA	-18	NA	238083245	238094849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238083355_238091217_238091255_238093860_238093945_238094419
transcript_87909.nic	chr2	-	1473	12	NIC	ENSG00000132323.9	novel	1455	12	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	44	junction_10	45.7363988724318	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238199997	True	NA	-3	True	AATAAA	-22	NA	238203690	238170401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194781_238194871_238203498
transcript_87911.known	chr2	-	1455	12	FSM	ENSG00000132323.9	ENST00000254654.8	1455	12	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_8	21.1202773585595	244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTGAGTTATTATACT	-238200002	True	NA	-3	True	AATAAA	-22	NA	238203695	238170401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238170677_238170942_238171025_238173533_238173654_238182064_238182187_238183652_238183741_238184019_238184114_238185180_238185288_238188130_238188258_238189852_238189973_238194274_238194332_238194804_238194871_238203498
transcript_8792.known	chr1	-	769	6	FSM	ENSG00000156171.15	ENST00000490780.5	769	6	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	90.7863425852149	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-111136385	True	NA	NA	False	AATAAA	-25	NA	111140090	111125377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139667_111140037
transcript_87926.known	chr2	-	689	3	FSM	ENSG00000186235.12	ENST00000475669.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCCAGTGCGCACATCGTTA	-238231568	False	NA	NA	False	AGTAAA	-29	NA	238231585	238224551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238224874_238227683_238227799_238231333
transcript_87929.known	chr2	-	730	3	FSM	ENSG00000186235.12	ENST00000409070.6	1010	3	280	0	-61	0	multi-exon	FALSE	canonical	0	0	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAATTTATTCACCG	-238231370	False	NA	NA	False	AATAAA	-14	NA	238231431	238225115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238225500_238227683_238227799_238231200
transcript_8793.nic	chr1	-	891	6	NIC	ENSG00000156171.15	novel	769	6	NA	NA	36	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_1	105.315905731281	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTGGGTTTTTTGCCTA	-111140145	False	NA	NA	False	AATAAA	-25	NA	111140167	111125377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139500_111139712_111140037
transcript_87930.known	chr2	-	691	3	FSM	ENSG00000186235.12	ENST00000409942.5	881	3	186	4	60	0	multi-exon	FALSE	canonical	1	4	junction_1	0.5	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCTTCAATTTATTCACCG	-238231508	False	NA	NA	False	AATAAA	-14	NA	238231525	238225115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_238225500_238227683_238227799_238231333
transcript_87933.known	chr2	+	4003	15	FSM	ENSG00000204104.12	ENST00000391993.7	4003	15	0	0	0	0	multi-exon	FALSE	canonical	3	91	junction_3	16.7008493001685	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCTGTCAAATTGTATCATA	NA	False	NA	3	True	AGTAAA	-16	NA	238320440	238400822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238320786_238325305_238325375_238325808_238325971_238328685_238328830_238328925_238329343_238332823_238332896_238333959_238334036_238347454_238347476_238348763_238348849_238349324_238349409_238352826_238352951_238353172_238353210_238356003_238356081_238397458_238397680_238398753
transcript_87943.nnic	chr2	+	1173	5	NNC	ENSG00000065802.12	novel	6891	5	NA	NA	-27	81	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	51.3438165702551	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTCTGTTCTGGATTTTC	238423217	True	NA	31	True	ACTAAA	-21	NA	238426976	238446732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_238427120_238433553_238433696_238435710_238435864_238444341_238444728_238446383
transcript_87944.nnic	chr2	+	1361	5	NNC	ENSG00000065802.12	novel	6891	5	NA	NA	-27	269	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_3	51.3438165702551	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAAAAGGGAGTTTCGTAAG	238423217	True	NA	-20	True	ATTAAA	-18	NA	238426976	238446920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_238427120_238433553_238433696_238435710_238435864_238444341_238444728_238446383
transcript_87945.known	chr2	+	6891	5	FSM	ENSG00000065802.12	ENST00000264607.9	6891	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	54.3369119475886	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGTGTGTTCTGCCTC	238423167	True	NA	17	True	AATAAA	-24	NA	238426926	238452250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238427120_238433553_238433696_238435710_238436014_238444341_238444728_238446383
transcript_87949.known	chr2	+	878	4	FSM	ENSG00000065802.12	ENST00000409297.1	878	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	40.8765077873451	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCAGAAGATGTCCTCGTAG	238423244	True	NA	-84	True	NA	NA	NA	238427003	238446617	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238427120_238433553_238433696_238444341_238444728_238446383
transcript_8795.known	chr1	-	688	6	FSM	ENSG00000156171.15	ENST00000463682.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	113.804393588297	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACACAAATAAGCTTTTGGG	-111136357	True	NA	NA	False	AATAAA	-14	NA	111140062	111125388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111125651_111126226_111126295_111131423_111131569_111137522_111137587_111139587_111139712_111140037
transcript_87953.known	chr2	+	1342	2	FSM	ENSG00000233608.4	ENST00000612363.2	1342	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGGTCTCCCCATCTCT	238847526	True	NA	3	True	AATAAA	-13	NA	238848084	238910534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_238848734_238909841
transcript_87954.known	chr2	+	384	2	FSM	ENSG00000222020.4	ENST00000409526.1	384	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCCTTAAATATCTCATTA	239401393	False	NA	4	True	AATAAA	-16	NA	239401435	239402357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_239401537_239402074
transcript_87955.known	chr2	+	414	2	FSM	ENSG00000222020.4	ENST00000428471.2	444	2	24	6	-2	-2	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTCCTTAAATATCTCAT	239401638	True	NA	2	True	AATAAA	-14	NA	239401747	239402355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_239401881_239402074
transcript_87956.known	chr2	+	455	2	FSM	ENSG00000222020.4	ENST00000413029.2	560	2	102	3	55	2	multi-exon	FALSE	canonical	3	7	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATATCTCATTAATAATTA	239401695	False	NA	11	True	AATAAA	-23	NA	239401804	239402364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_239401970_239402074
transcript_87957.known	chr2	+	401	2	FSM	ENSG00000222020.4	ENST00000691044.1	493	2	42	50	12	-13	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCAATTTTACATTTCCTT	239401652	True	NA	-9	True	AATAAA	-3	NA	239401761	239402344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_239401893_239402074
transcript_87961.known	chr2	-	1580	10	FSM	ENSG00000130414.13	ENST00000444548.6	1580	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	297.775082906545	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCTGTTGTAATGTCTTTGT	-240015141	True	NA	-8	True	NA	NA	NA	240025340	239969220	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_239969763_239990073_239990183_240005209_240005296_240007315_240007371_240011616_240011697_240014738_240014861_240018552_240018640_240021196_240021413_240022171_240022341_240025226
transcript_87962.known	chr2	-	699	4	FSM	ENSG00000130414.13	ENST00000407129.3	699	4	0	0	0	0	multi-exon	FALSE	canonical	3	973	junction_3	43.8482230730809	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAACTTCCTAAGTATCTTC	-240015108	True	NA	NA	False	AATAAA	-33	NA	240025307	240018406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240018640_240021196_240021413_240022171_240022341_240025226
transcript_87963.known	chr2	-	640	3	FSM	ENSG00000172428.11	ENST00000489698.1	640	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	954	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240136165	False	NA	-24	True	ATTAAA	-15	NA	240136176	240130827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240131089_240133932_240134006_240135870
transcript_87966.known	chr2	-	418	3	FSM	ENSG00000172428.11	ENST00000607357.2	418	3	0	0	0	0	multi-exon	FALSE	canonical	3	1691	junction_2	125.5	28491	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGGAGTGATCTCTTTC	-240122613	True	NA	-24	True	ATTAAA	-15	NA	240136305	240130827	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240131089_240133932_240134006_240136221
transcript_87967.known	chr2	-	645	5	FSM	ENSG00000178602.8	ENST00000391989.6	645	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	0.82915619758885	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCGTTGTGGGTTGTCTT	NA	False	NA	NA	False	AATAAA	-22	NA	240144562	240139025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240139355_240140061_240140089_240140268_240140445_240140619_240140694_240144523
transcript_87969.known	chr2	+	3719	9	FSM	ENSG00000063660.9	ENST00000264039.7	3719	9	0	0	0	0	multi-exon	FALSE	canonical	3	180	junction_8	21.802737786801	102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGCAGGGCGAGGCCTCGGG	240433657	True	NA	14	True	AATAAA	-15	NA	240435662	240468076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_240436085_240459029_240459189_240462190_240462583_240463346_240463513_240464615_240464747_240464855_240464976_240465076_240465211_240465472_240465649_240466057
transcript_87970.known	chr2	-	3304	5	FSM	ENSG00000144504.16	ENST00000405002.5	3304	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	5.54526825320471	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTGGTCCGCATCACCT	-240560859	True	NA	-1	True	AATAAA	-16	NA	240561091	240521937	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240524382_240525684_240525850_240552913_240553058_240554865_240555056_240560730
transcript_87973.known	chr2	+	817	3	FSM	ENSG00000188542.10	ENST00000438823.1	817	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	8.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGCTTTGGTAAACTG	240560739	False	NA	10	True	AATAAA	-18	NA	240560791	240564014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_240561078_240561329_240561520_240563673
transcript_87974.known	chr2	-	1221	3	FSM	ENSG00000144504.16	ENST00000464991.5	1221	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCCTTGCATTTTATTCC	-240561428	False	NA	NA	False	AATAAA	-2	NA	240561445	240552741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_240553058_240554865_240555056_240560730
transcript_87975.known	chr2	+	4648	2	FSM	ENSG00000188542.10	ENST00000405954.2	4648	2	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGCCTTTTCCAATACTCG	240560298	True	NA	NA	False	AGTAAA	-20	NA	240560356	240565256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_240561078_240561329
transcript_87976.nic	chr2	+	640	2	ISM	ENSG00000188542.10	ENST00000438823.1	817	3	429	0	429	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGCAGCTTTGGTAAACTG	240561207	False	NA	10	True	AATAAA	-18	NA	240561220	240564014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_+_240561520_240563673
transcript_87977.known	chr2	+	837	1	FSM	ENSG00000287049.1	ENST00000654460.1	837	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTTCATGTAGTCTATTA	NA	False	NA	NA	False	ATTAAA	-31	NA	240558088	240558925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_240558100_240558900
transcript_87980.nic	chr2	-	1043	10	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-5	8055	-3	5461	5prime_fragment	FALSE	canonical	3	204	junction_9	20.1482162308218	60	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCGGCTTCCTTCAGCC	-240820106	False	NA	NA	False	NA	NA	NA	240820222	240782589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_240782608_240783043_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_87983.nic	chr2	-	1026	9	ISM	ENSG00000130294.18	ENST00000650542.1	2430	11	-5	8508	-3	5008	5prime_fragment	FALSE	canonical	3	204	junction_8	18.3469173159962	41	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGAGTGGCCCGGCCCGGCTT	-240820106	False	NA	-10	True	NA	NA	NA	240820222	240783042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr2_-_240783110_240783738_240783817_240784988_240785101_240786334_240786514_240787250_240787317_240788050_240788231_240789235_240789313_240797646_240797813_240820121
transcript_87987.known	chr2	-	4524	7	FSM	ENSG00000122085.17	ENST00000614476.4	4524	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.5859420855691	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGACATGTCAGTGCTAGA	-241100405	True	NA	NA	False	AATAAA	-13	NA	241102295	241087098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241095129_241096439_241097242_241097428_241099395_241099895_241102252
transcript_87998.known	chr2	-	3993	5	FSM	ENSG00000122085.17	ENST00000464344.6	3993	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	26.4054918530218	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACCTGCTTCTAAAATGTT	-241102317	False	NA	NA	False	AATAAA	-17	NA	241102332	241072168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241075683_241089187_241089366_241089979_241090045_241094276_241094433_241102252
transcript_87999.nnic	chr2	-	644	5	NIC	ENSG00000122085.17	novel	3993	5	NA	NA	0	-493	combination_of_known_splicesites	FALSE	canonical	3	17	junction_1	18.9934199132226	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAGTCAAAAGGCGTGA	-241102317	False	NA	NA	False	AATAAA	-20	NA	241102332	241075546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_241075683_241089187_241089366_241089979_241090045_241097242_241097428_241102252
transcript_880.known	chr1	-	1083	5	FSM	ENSG00000186891.14	ENST00000379268.7	1083	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	2.1650635094611	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGAGTGGATGCATGCTGG	-1206550	True	NA	-4	True	AATAAA	-15	NA	1206592	1203507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369_1205493_1206384
transcript_88006.nic	chr2	-	459	4	NIC	ENSG00000122085.17	novel	3993	5	NA	NA	0	-493	combination_of_known_junctions	FALSE	canonical	3	13	junction_3	24.5673676969177	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATAAAGTCAAAAGGCGTGA	-241102317	False	NA	NA	False	AATAAA	-20	NA	241102332	241075546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_241075683_241089187_241089366_241089979_241090045_241102252
transcript_88009.known	chr2	-	614	4	FSM	ENSG00000122085.17	ENST00000476564.5	614	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	30.2691628926573	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTGGGAAATGCTGGCT	-241100430	True	NA	NA	False	NA	NA	NA	241102320	241089040	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241094276_241094433_241102252
transcript_88010.nnic	chr2	-	527	4	NIC	ENSG00000122085.17	novel	576	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	17.6635217326557	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGTAGATGGCTTTCT	-241102317	False	NA	-25	True	GATAAA	-28	NA	241102332	241089168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_241089366_241089979_241090045_241097242_241097428_241102252
transcript_88011.nnic	chr2	-	847	4	NIC	ENSG00000122085.17	novel	909	5	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_2	39.668067202166	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGTTGTAGATGGCTTTCT	-241102323	False	NA	-25	True	GATAAA	-28	NA	241102338	241089168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_241089366_241089979_241090045_241099395_241099895_241102252
transcript_88012.known	chr2	-	1587	4	FSM	ENSG00000122085.17	ENST00000391980.7	1587	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_3	5.90668171555645	474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	-241100397	True	NA	-19	True	AATAAA	-16	NA	241102287	241095570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241096439_241097242_241097428_241099395_241099895_241102252
transcript_88013.known	chr2	-	585	3	FSM	ENSG00000122085.17	ENST00000480298.5	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	27	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGCCCCTGCCCCACTTTT	-241100421	True	NA	NA	False	NA	NA	NA	241102311	241088904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241089366_241089979_241090045_241102252
transcript_88014.known	chr2	-	802	3	FSM	ENSG00000122085.17	ENST00000406593.1	802	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_2	39	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAATTATAAGTCACCTG	-241100409	True	NA	NA	False	NA	NA	NA	241102299	241095868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241096439_241097242_241097428_241102252
transcript_88015.nnic	chr2	-	1453	3	NIC	ENSG00000122085.17	novel	1587	4	NA	NA	-6	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	48	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGAGGTTTTAGTACATCA	-241102323	False	NA	-19	True	AATAAA	-16	NA	241102338	241095570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_241096439_241099395_241099895_241102252
transcript_88016.known	chr2	-	789	2	FSM	ENSG00000122085.17	ENST00000475860.1	789	2	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGAGGCGGAGGTTGCAGTG	-241100424	True	NA	NA	False	NA	NA	NA	241102314	241099167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241099895_241102252
transcript_88017.known	chr2	-	4540	18	FSM	ENSG00000115687.14	ENST00000234040.9	4540	18	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_17	41.1799998487525	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTGACTTGGATGTTGTGA	-241145786	True	NA	-8	True	ATTAAA	-24	NA	241149472	241106098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115042_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_88022.known	chr2	+	959	9	FSM	ENSG00000115685.15	ENST00000423280.5	959	9	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	195.85960373441	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGTGCGGCAGATCGATGC	241149231	True	NA	NA	False	NA	NA	NA	241149612	241182784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_88023.known	chr2	+	883	8	FSM	ENSG00000115685.15	ENST00000402734.5	883	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	202.710913089834	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTTACTTGTTTTTTTCT	241149210	True	NA	16	True	AATAAA	-17	NA	241149591	241167172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241149709_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_88031.known	chr2	+	1941	10	FSM	ENSG00000115685.15	ENST00000234038.11	1941	10	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	116.152305292195	997	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCGAAGTCTGGATTTAATG	241147845	True	NA	8	True	TATAAA	-18	NA	241150466	241183652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241169780_241169868_241182646
transcript_88032.known	chr2	+	965	9	FSM	ENSG00000115685.15	ENST00000406106.7	965	9	0	0	0	0	multi-exon	FALSE	canonical	3	275	junction_8	98.8610135493259	1574	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147858	True	NA	18	True	AATAAA	-19	NA	241150479	241167174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241153475_241153605_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_88033.known	chr2	+	820	8	FSM	ENSG00000115685.15	ENST00000401987.5	820	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	204.506673709776	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTACTTGTTTTTTTCTGT	241147874	True	NA	18	True	AATAAA	-19	NA	241150495	241167174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241150548_241157806_241157863_241158483_241158550_241159212_241159344_241160331_241160495_241163284_241163402_241166336_241166442_241167044
transcript_88034.known	chr2	-	4326	18	FSM	ENSG00000115687.14	ENST00000358649.8	4326	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_4	57.0329838398338	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTCTGAAGGCATGAGTG	-241145749	True	NA	-22	True	ATTAAA	-17	NA	241149435	241106296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241106724_241107352_241107500_241108166_241108301_241112239_241112440_241115021_241115178_241115287_241115414_241122731_241122900_241123948_241124134_241126195_241127452_241132873_241133031_241135870_241136040_241137003_241137265_241137952_241138088_241138653_241138795_241139884_241140056_241140520_241140754_241142836_241143075_241149413
transcript_88035.known	chr2	+	2196	2	FSM	ENSG00000146205.15	ENST00000487192.1	2196	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCCTTGGAGTTCTA	241216615	True	NA	21	True	NA	NA	NA	241218184	241225184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241218382_241223185
transcript_88036.known	chr2	+	726	4	FSM	ENSG00000146205.15	ENST00000402530.8	726	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTGTGTTTATGACTCTC	NA	False	NA	NA	False	ATTAAA	-19	NA	241188676	241196168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241188767_241190056_241190172_241191193_241191252_241195705
transcript_88037.known	chr2	+	1905	4	FSM	ENSG00000146205.15	ENST00000481071.1	1905	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	18.1903515328563	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCGTGGTGGCTCACAC	241216703	True	NA	3	True	AAAAAG	-17	NA	241218272	241225245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241218382_241223185_241223782_241223904_241223956_241224096
transcript_88040.known	chr2	-	4489	28	FSM	ENSG00000115677.18	ENST00000391976.6	4489	28	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_27	228.763779783896	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTTGCCCTCTTCCTTTCC	-241315256	False	NA	-11	True	AATAAA	-26	NA	241315292	241229211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315101
transcript_88041.known	chr2	-	6322	28	FSM	ENSG00000115677.18	ENST00000310931.10	6322	28	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_27	209.416322570907	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGCATGCTGGGACTCAT	-241302653	True	NA	-31	True	AATAAA	-14	NA	241315672	241227290	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241229688_241229832_241229962_241230152_241230270_241230758_241230945_241233819_241233964_241235120_241235256_241235489_241235595_241236614_241236770_241238648_241238788_241239601_241239821_241239900_241240123_241242459_241242679_241246751_241246884_241247055_241247143_241248002_241248117_241248243_241248349_241249840_241249981_241252956_241253036_241253392_241253498_241255050_241255159_241255373_241255581_241256183_241256400_241256599_241256807_241262710_241262927_241264447_241264606_241266793_241266907_241268476_241268542_241315569
transcript_88049.known	chr2	+	3333	14	FSM	ENSG00000168385.18	ENST00000402092.6	3333	14	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	1520.35177337118	4732	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288658	True	NA	NA	False	AATAAA	-23	NA	241315927	241354027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241320202_241320288_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_88055.known	chr2	+	3446	14	FSM	ENSG00000168385.18	ENST00000616972.4	3446	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1524.30486630588	3549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241288591	True	NA	NA	False	AATAAA	-20	NA	241315860	241354024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241316421_241316556_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_88059.known	chr2	+	3701	13	FSM	ENSG00000168385.18	ENST00000391973.6	3701	13	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	1128.88168297952	3684	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241315074	False	NA	NA	False	AATAAA	-20	NA	241315099	241354024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315611_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_8807.known	chr1	+	2110	3	FSM	ENSG00000134255.15	ENST00000480324.5	2110	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	81	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGATTGAAATTATGGGG	111139610	False	NA	NA	False	NA	NA	NA	111139654	111160970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111139762_111147641_111148054_111159379
transcript_88070.known	chr2	+	3267	12	FSM	ENSG00000168385.18	ENST00000407971.5	3267	12	0	0	0	0	multi-exon	FALSE	canonical	3	135	junction_1	1193.23719005717	4683	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288613	True	NA	NA	False	AATAAA	-23	NA	241315882	241354027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_88088.known	chr2	+	1163	5	FSM	ENSG00000168385.18	ENST00000461048.5	1163	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	173.841882180331	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCTCATTTTCAGTATGC	241288624	True	NA	NA	False	AATAAA	-16	NA	241315893	241325244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241316429_241316541_241317498_241317600_241324215_241324242_241324408
transcript_88098.known	chr2	+	1005	7	FSM	ENSG00000168385.18	ENST00000428282.5	1005	7	0	0	0	0	multi-exon	FALSE	canonical	2	88	junction_1	1599.07300403147	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGAGCAGACTAGACTTCTC	241312761	True	NA	NA	False	NA	NA	NA	241315269	241343070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315611_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991
transcript_881.known	chr1	-	727	4	FSM	ENSG00000186891.14	ENST00000486728.5	727	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.69967317119759	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGCCGTCCTCCGGGGC	-1205638	False	NA	NA	False	NA	NA	NA	1205680	1203843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1203969_1204033_1204237_1204398_1204487_1205369
transcript_88103.known	chr2	+	3613	14	FSM	ENSG00000168385.18	ENST00000360051.7	3613	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	1454.36597951371	3554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAGTATTTCTCTTGGT	241312780	True	NA	NA	False	AATAAA	-20	NA	241315288	241354024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315611_241317498_241317600_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_88104.known	chr2	+	3251	13	FSM	ENSG00000168385.18	ENST00000391971.7	3251	13	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	349.882797836965	6517	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGTATTTCTCTTGGTTAT	241288655	True	NA	NA	False	AATAAA	-23	NA	241315924	241354027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381_241337517_241337672_241337791_241342991_241343094_241343751_241343898_241346165_241346250_241348133_241348192_241350072_241350204_241351966
transcript_88105.known	chr2	+	372	5	FSM	ENSG00000168385.18	ENST00000441533.5	372	5	0	0	0	0	multi-exon	FALSE	canonical	3	372	junction_1	1847.17595263689	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGTAAAAACATTCTTATGT	241288674	True	NA	4	True	NA	NA	NA	241315943	241335210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241317498_241317600_241324215_241324242_241325992_241326114_241335125
transcript_88106.known	chr2	+	571	6	FSM	ENSG00000168385.18	ENST00000467971.5	571	6	0	0	0	0	multi-exon	FALSE	canonical	3	3174	junction_1	485.226792335295	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTGTAAGTTTTACCCAAA	241288676	True	NA	NA	False	NA	NA	NA	241315945	241337557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241315983_241324215_241324242_241325992_241326114_241335125_241335213_241335974_241336099_241337381
transcript_88107.known	chr2	+	801	2	FSM	ENSG00000168385.18	ENST00000451310.1	801	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGTTGTTTTTAAAACCACT	241350001	True	NA	85	True	TTTAAA	-23	NA	241350086	241352626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241350204_241351942
transcript_88109.nnic	chr2	+	1696	10	NNC	ENSG00000006607.14	novel	2122	18	NA	NA	-10	901	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_9	18.9899258542686	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTCCTGCAGTTATTCGAG	241353162	True	NA	NA	False	AGTAAA	-34	NA	241356274	241433142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr2_+_241356389_241373083_241373291_241403827_241403933_241404798_241404842_241407536_241407616_241411032_241411131_241413306_241413422_241417961_241418110_241431678_241431775_241432451
transcript_88112.known	chr2	+	839	3	FSM	ENSG00000006607.14	ENST00000479427.5	839	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	28	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATGTTTAGTACTTTAAAAAT	241353186	True	NA	NA	False	NA	NA	NA	241356298	241395984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241395442
transcript_88114.known	chr2	+	617	6	FSM	ENSG00000006607.14	ENST00000478489.5	617	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.255972819919	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTAGTAGCACTTCTCAG	241353182	True	NA	NA	False	ATTAAA	-16	NA	241356294	241405403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241356389_241373083_241373291_241395442_241395459_241403827_241403933_241404798_241404842_241405251
transcript_88116.known	chr2	-	4515	12	FSM	ENSG00000115694.15	ENST00000316586.9	4515	12	0	0	0	0	multi-exon	FALSE	canonical	3	493	junction_11	142.268631948029	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATCCACAAACCCATCCAA	-241496953	True	NA	NA	False	AATAAA	-20	NA	241508584	241492669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508442
transcript_88117.known	chr2	-	2210	12	FSM	ENSG00000115694.15	ENST00000403346.7	2210	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_11	250.340528411381	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCAGGTGTGTGTGGTGGGG	-241508604	False	NA	-4	True	AATAAA	-18	NA	241508688	241495016	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005_241508136_241508504
transcript_88121.known	chr2	-	2251	11	FSM	ENSG00000115694.15	ENST00000401869.5	2251	11	0	0	0	0	multi-exon	FALSE	canonical	3	823	junction_4	72.0308267341143	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCAGGTGTGTGTGGTGG	-241508278	False	NA	-6	True	AATAAA	-16	NA	241508362	241495018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508005
transcript_88122.known	chr2	-	2459	11	FSM	ENSG00000115694.15	ENST00000535007.5	2459	11	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_10	253.244960463185	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	-241508611	False	NA	-1	True	AATAAA	-40	NA	241508695	241494706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_88123.nic	chr2	-	2024	11	NIC	ENSG00000115694.15	novel	2210	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	30	junction_10	279.699195565522	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACATGCAGGTGTGTGTGG	-241508443	True	NA	-9	True	AATAAA	-13	NA	241508637	241495021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508504
transcript_88124.known	chr2	-	2556	11	FSM	ENSG00000115694.15	ENST00000543554.5	2556	11	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_10	282.324299343857	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTGCTTCTCTAGAGGT	NA	False	NA	-1	True	AATAAA	-40	NA	241509572	241494706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397_241496535_241497615_241497688_241498234_241498350_241498638_241498785_241498988_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241509222
transcript_88138.known	chr2	-	797	2	FSM	ENSG00000115694.15	ENST00000494699.1	797	2	0	0	0	0	multi-exon	FALSE	canonical	3	1011	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTCAATAAAGACCTGAC	-241496432	False	NA	17	True	NA	NA	NA	241496538	241495045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241495702_241496397
transcript_88139.known	chr2	-	923	6	FSM	ENSG00000115694.15	ENST00000442307.5	923	6	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_5	322.504325552387	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAAGGCCCGCCTCTGGCCC	-241508540	False	NA	NA	False	NA	NA	NA	241508624	241498988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241499175_241499256_241499415_241500172_241500282_241500739_241500797_241501477_241501709_241508442
transcript_8814.known	chr1	-	2246	9	FSM	ENSG00000156171.15	ENST00000286692.8	2246	9	0	0	0	0	multi-exon	FALSE	canonical	3	213	junction_3	22.6546766695091	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTCAAGAGCTTCTTAGATT	-111136335	True	NA	-4	True	AATAAA	-13	NA	111140040	111117332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111118268_111118804_111118898_111119876_111119960_111120515_111120694_111124741_111124882_111126226_111126295_111131423_111131569_111137522_111137587_111139500
transcript_88142.nnic	chr2	-	608	3	Antisense	novelGene_ENSG00000176720.6_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTATCATGTGTCAGGTCAAC	-241553591	True	NA	NA	False	ATTAAA	-15	NA	241553606	241546657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr2_-_241547074_241549930_241550062_241553545
transcript_88145.known	chr2	-	2076	6	FSM	ENSG00000176946.13	ENST00000407315.6	2076	6	0	0	0	0	multi-exon	FALSE	canonical	3	412	junction_5	36.29876030941	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241635482	True	NA	-2	True	AATAAA	-38	NA	241637158	241584404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241632916_241634080_241636940
transcript_88148.known	chr2	-	785	5	FSM	ENSG00000176946.13	ENST00000402136.5	785	5	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_4	202.644238753536	358	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACTTGCGTAGGCTGTACA	-241616863	True	NA	-2	True	AATAAA	-38	NA	241617501	241584404	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241584726_241601895_241602000_241602969_241603080_241606313_241606474_241617411
transcript_88149.known	chr2	-	833	5	FSM	ENSG00000176946.13	ENST00000402545.5	833	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	234.826930951286	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCTGAGGATTTTGAATAT	-241616852	True	NA	-24	True	AATAAA	-16	NA	241617490	241584426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241584726_241601814_241602000_241602969_241603080_241606313_241606474_241617411
transcript_8815.known	chr1	+	1966	9	NNC	ENSG00000134255.15	novel	2251	9	NA	NA	4195	-112	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_5	57.5259452334336	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTTTTCTCAGTTTTACT	111147635	False	NA	18	True	AATAAA	-18	NA	111147676	111184988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_111148054_111159379_111159528_111161154_111161297_111174878_111174964_111182186_111182298_111182298_111182319_111182798_111182958_111183461_111183588_111184190
transcript_88154.nic	chr2	+	1659	14	NIC	ENSG00000168397.17	novel	1566	13	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	3	139	junction_3	205.092647559195	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	241626212	True	NA	-24	True	NA	NA	NA	241637628	241672592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_88157.known	chr2	+	2414	13	FSM	ENSG00000168397.17	ENST00000482507.5	2414	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	212.914823866781	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGACATGAATTTCTGGG	241626281	True	NA	15	True	ATTAAA	-22	NA	241637697	241672631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311
transcript_88162.known	chr2	+	2797	13	FSM	ENSG00000168397.17	ENST00000404914.8	2797	13	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_12	86.483941990535	468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTGTGTCTATTTTTTCCT	241626276	True	NA	92	True	AAAACA	-3	NA	241637692	241673857	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_88163.known	chr2	+	3294	13	FSM	ENSG00000168397.17	ENST00000405546.7	3294	13	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_12	195.726903703434	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAACCTTGTGTCTATTTTTT	NA	False	NA	89	True	NA	NA	NA	241637212	241673854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671426_241672190
transcript_88164.known	chr2	+	1685	13	FSM	ENSG00000168397.17	ENST00000402096.5	1685	13	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_12	196.745376198668	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACACAGACATGAATTTCT	241626195	True	NA	12	True	ATTAAA	-19	NA	241637611	241672628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671442_241672190
transcript_8817.known	chr1	-	1894	12	FSM	ENSG00000162777.17	ENST00000369752.5	1894	12	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_11	5.30865502569325	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTGTCTTTGGCTTTTAC	-111204309	False	NA	1	True	AGTAAA	-20	NA	111204409	111187173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111187682_111188130_111188371_111188701_111188787_111189211_111189254_111192139_111192318_111194577_111194727_111195915_111196057_111197175_111197254_111197919_111197990_111198629_111198743_111199622_111199799_111204295
transcript_88192.known	chr2	+	807	7	FSM	ENSG00000168397.17	ENST00000425239.5	807	7	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	91.2761378090316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCGTTTATGAAGGCCCT	241626290	True	NA	NA	False	NA	NA	NA	241637706	241659448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270_241655344_241659107
transcript_88198.known	chr2	+	556	6	FSM	ENSG00000168397.17	ENST00000479554.5	556	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	368.695321369827	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGTTTCCCCTCAGAGCTT	241626276	True	NA	-58	True	NA	NA	NA	241637692	241654705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241651883_241651975_241653511_241653611_241654545
transcript_882.known	chr1	-	1075	7	FSM	ENSG00000186827.11	ENST00000379236.4	1075	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCCGACCGGCACTGTGG	-1214113	False	NA	NA	False	AATAAA	-18	NA	1214153	1211339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1211626_1211703_1211833_1211941_1212139_1212637_1212705_1212991_1213094_1213662_1213786_1213982
transcript_88202.known	chr2	+	581	6	FSM	ENSG00000168397.17	ENST00000465399.5	581	6	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	99.6405539928397	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTATTTACTTCATGGCC	241626276	True	NA	NA	False	NA	NA	NA	241637692	241655444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241655270
transcript_88203.known	chr2	+	1103	6	FSM	ENSG00000168397.17	ENST00000483778.5	1103	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	287.531146138988	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCCTCATTGCCTTTTTCAC	241626245	True	NA	NA	False	NA	NA	NA	241637661	241659772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545_241654648_241659107
transcript_8821.known	chr1	+	1518	10	FSM	ENSG00000064886.14	ENST00000466741.5	1518	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATGGCCTCATTTATTCA	NA	False	NA	8	True	AATAAA	-23	NA	111229691	111243439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111229882_111230741_111230944_111231237_111231295_111234906_111235058_111235638_111235764_111236023_111236154_111238749_111238933_111241326_111241444_111242226_111242367_111243216
transcript_88211.known	chr2	+	762	5	FSM	ENSG00000168397.17	ENST00000475195.5	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	572	junction_1	106.161433675323	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCGGCTTTTGAGCACTGT	241626276	True	NA	3	True	AGTAAA	-27	NA	241637692	241655002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241637725_241651009_241651112_241651263_241651336_241653511_241653611_241654545
transcript_88222.known	chr2	+	1566	13	FSM	ENSG00000168397.17	ENST00000344376.9	1566	13	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_2	213.441248746972	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTTGGTTTGGAATTAAAGT	NA	False	NA	-24	True	NA	NA	NA	241651006	241672592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241651112_241651263_241651336_241653306_241653370_241653511_241653611_241654545_241654648_241655270_241655344_241659107_241659188_241666644_241666839_241668142_241668222_241668539_241668686_241670725_241670783_241671311_241671406_241672190
transcript_88229.known	chr2	-	1089	4	FSM	ENSG00000168393.13	ENST00000400770.6	1089	4	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_2	386.09411633262	2690	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	NA	False	NA	-9	True	AGTAAA	-15	NA	241686944	241675746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241676238_241678451_241678650_241685768_241685878_241686653
transcript_8823.known	chr1	+	2293	6	FSM	ENSG00000173947.14	ENST00000369738.9	2293	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	12.1227059685534	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GACTAAAACATACTGTGCCA	111346072	True	NA	NA	False	AATAAA	-18	NA	111346621	111353013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111346672_111346909_111347050_111347673_111347773_111348515_111348647_111350105_111350224_111351258
transcript_88230.known	chr2	-	1051	5	FSM	ENSG00000168393.13	ENST00000305784.7	1051	5	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_3	203.794473673846	5467	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGTGGAACGCTTCAC	-241674825	True	NA	-9	True	AGTAAA	-15	NA	241686815	241675746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241676238_241678451_241678650_241680228_241680320_241685768_241685878_241686653
transcript_88234.known	chr2	+	946	8	FSM	ENSG00000168395.16	ENST00000406941.5	946	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	72.1322481591264	155	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCTTTGTTTGCCTGTGCT	241697515	True	NA	NA	False	AATAAA	-21	NA	241702045	241724036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241723790
transcript_88235.known	chr2	+	5197	8	FSM	ENSG00000168395.16	ENST00000313552.11	5197	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	59.5493278633738	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAATTGAAAGTGCATCTGTA	241697508	True	NA	NA	False	AATAAA	-22	NA	241702038	241729478	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241722938_241723075_241723209_241723272_241724988
transcript_88237.known	chr2	+	822	5	FSM	ENSG00000168395.16	ENST00000492488.5	822	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	74.643737178681	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACAGGAGGATGGTGAG	241697504	True	NA	NA	False	NA	NA	NA	241702034	241712380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977
transcript_88238.known	chr2	+	543	4	FSM	ENSG00000168395.16	ENST00000493261.5	543	4	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	7.84573486395988	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGTGGTGGCTTACGCCTG	241697515	True	NA	NA	False	NA	NA	NA	241702045	241711623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376
transcript_88239.known	chr2	+	2376	7	FSM	ENSG00000168395.16	ENST00000482774.5	2376	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.2074158782282	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTACTAATGGGAATACAC	241697511	True	NA	-27	True	NA	NA	NA	241702041	241721715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_241702103_241704652_241704725_241709215_241709383_241711376_241711489_241711977_241712072_241719482_241719613_241719975
transcript_88240.known	chr2	-	2097	5	FSM	ENSG00000188389.11	ENST00000334409.10	2097	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	0.707106781186548	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTTCTGTCCTGTCTGGT	-241858876	True	NA	NA	False	ATTAAA	-17	NA	241858894	241849883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241851298_241851948_241851984_241852197_241852354_241852620_241852981_241858762
transcript_88243.nnic	chr2	-	607	3	Intergenic	novelGene_34	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTTGCCTAAAGTCGTT	NA	False	NA	NA	False	ATTAAA	-16	NA	241881329	241879033	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr2_-_241879277_241880868_241881018_241881114
transcript_88246.known	chr2	-	507	3	FSM	ENSG00000216921.9	ENST00000401641.2	507	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGTTCTCTAGCGCATCTCT	-241902529	True	NA	NA	False	NA	NA	NA	241902551	241894036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_-_241894340_241897185_241897335_241902496
transcript_88248.known	chr2	+	557	4	FSM	ENSG00000220804.10	ENST00000444990.6	577	4	20	0	-5	0	multi-exon	FALSE	canonical	3	14	junction_3	5.31245915016974	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAATAGCATATGAGGAGCTT	242088243	True	NA	NA	False	AAAACA	-45	NA	242088678	242116372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182
transcript_88249.known	chr2	+	1235	8	FSM	ENSG00000220804.10	ENST00000456398.5	1235	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	8.56666534317997	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTTTTTTTTTTTAA	NA	False	NA	NA	False	NA	NA	NA	242088632	242140638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr2_+_242088802_242094886_242095028_242114638_242114742_242116182_242116233_242118964_242119058_242122286_242122456_242138783_242138889_242140233
transcript_88251.known	chr20	-	1576	11	FSM	ENSG00000196476.12	ENST00000360321.7	1576	11	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_10	78.4199591940725	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-290652	True	NA	-13	True	AATAAA	-18	NA	290750	270862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258_290308_290590
transcript_88253.nic	chr20	-	1568	10	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	291	0	-30	0	3prime_fragment	FALSE	canonical	3	108	junction_2	60.9573824006232	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-288003	True	NA	-13	True	AATAAA	-18	NA	290459	270862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_88256.nnic	chr20	-	1443	9	NNC	ENSG00000196476.12	novel	1420	9	NA	NA	-61	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	86.775212474531	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-290431	False	NA	-13	True	AATAAA	-18	NA	290490	270862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_271268_275967_276049_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_88258.known	chr20	-	1420	9	FSM	ENSG00000196476.12	ENST00000382369.9	1420	9	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_8	69.173581481661	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-287973	True	NA	-13	True	AATAAA	-18	NA	290429	270862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_271268_275967_276087_276792_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_290258
transcript_8826.known	chr1	+	746	5	FSM	ENSG00000173947.14	ENST00000369737.4	746	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	21.2720473861826	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTGAGTTGGGTGATTTCA	111346070	True	NA	71	True	NA	NA	NA	111346619	111351563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111346672_111346909_111347050_111348515_111348647_111350105_111350224_111351258
transcript_88261.nic	chr20	-	2274	9	NIC	ENSG00000196476.12	novel	1576	11	NA	NA	-30	0	intron_retention	FALSE	canonical	3	115	junction_8	58.1162627841812	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTGCCAGTGTCTCGGG	-288003	True	NA	-13	True	AATAAA	-18	NA	290459	270862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_271268_275967_276880_277043_277146_277225_277384_278329_278430_279171_279331_283962_284082_289558_289677_290258
transcript_88272.nic	chr20	-	447	2	ISM	ENSG00000196476.12	ENST00000360321.7	1576	11	291	18568	-30	-18568	internal_fragment	FALSE	canonical	3	115	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTATTGATATAGAAGTTTAT	-288003	True	NA	-6	True	AATAAA	-18	NA	290459	289430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_289677_290258
transcript_88277.known	chr20	+	504	5	FSM	ENSG00000125841.13	ENST00000608467.5	504	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	103.608337019759	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAGTCAAAAGTCTTGTTGA	345701	True	NA	NA	False	AATGAA	-12	NA	347119	359405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_349248_349364_349637_349833_355325_355350_359258
transcript_88279.known	chr20	+	2074	5	FSM	ENSG00000125841.13	ENST00000382285.7	2074	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	110.590178135312	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTGACTTTGTTTCCTTTC	345692	True	NA	6	True	AATAAA	-14	NA	347110	354862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_347433_347513_349248_349364_349637_349833_353209
transcript_88281.known	chr20	+	2088	4	FSM	ENSG00000125841.13	ENST00000382291.7	2088	4	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	33.0689515339624	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTGTTTCCTTTCTCCCTG	346659	False	NA	12	True	AATAAA	-20	NA	347023	354868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_349248_349364_349637_349833_353209
transcript_88285.known	chr20	+	846	3	FSM	ENSG00000125841.13	ENST00000492242.5	846	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	68.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACCATAACCCCCTCTC	346518	False	NA	NA	False	NA	NA	NA	346882	353680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_347143_349248_349364_353209
transcript_88288.known	chr20	-	1411	3	FSM	ENSG00000225377.6	ENST00000414676.6	1411	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATATGGTGTTTGTGTTTGT	-324742	True	NA	-2	True	NA	NA	NA	325269	319686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_320782_322377_322566_325141
transcript_88290.known	chr20	-	768	3	FSM	ENSG00000225377.6	ENST00000442637.2	768	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	10.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCATTTGTTGGGAATTTG	-348174	True	NA	-14	True	NA	NA	NA	348224	320326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_320782_322377_322566_348099
transcript_88295.known	chr20	+	2356	4	FSM	ENSG00000101255.12	ENST00000217233.9	2356	4	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	13.0213499897497	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATTTTTCTCTGCAATT	380744	False	NA	NA	False	AATAAA	-18	NA	380759	397559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_381170_388010_388302_391286_391580_396197
transcript_88296.known	chr20	+	1070	4	FSM	ENSG00000101255.12	ENST00000449710.5	1070	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	47.5184174820669	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCGCCGCGGGGCCTACG	381233	False	NA	NA	False	NA	NA	NA	381245	396428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_381501_388010_388302_391286_391580_396197
transcript_88297.nnic	chr20	-	432	2	Antisense	novelGene_ENSG00000101255.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	4	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTTCAGTTTCAGACATTC	-380970	True	NA	4	True	AATAAA	-18	NA	380986	376688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_376893_380758
transcript_88299.known	chr20	+	3701	12	FSM	ENSG00000125826.21	ENST00000356286.10	3701	12	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_6	31.9356274013939	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTCAAAGCTTGGTAATGCC	406651	True	NA	NA	False	ATTAAA	-28	NA	408298	432139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_420870_421032_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_88300.known	chr20	+	2599	11	FSM	ENSG00000125826.21	ENST00000640614.1	2599	11	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_6	31.1069124150887	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGGGATGAGTGTGATGTCC	407144	True	NA	6	True	ATTAAA	-14	NA	408064	430964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409880_410026_417525_417620_417731_417931_419346_419469_419557_419732_422126_422239_427312_427493_428490_428590_428950_429095_430349
transcript_88303.known	chr20	+	1200	3	FSM	ENSG00000125826.21	ENST00000475269.5	1200	3	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_2	32.5	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	407157	False	NA	26	True	AATAAA	-19	NA	408077	410764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409880_410026_410411
transcript_88304.known	chr20	+	1024	3	FSM	ENSG00000125826.21	ENST00000400245.3	1024	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	47.5	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406657	True	NA	26	True	AATAAA	-19	NA	408304	410764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_409829_410026_410411
transcript_88305.known	chr20	+	790	2	FSM	ENSG00000125826.21	ENST00000400247.3	790	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGACTGCTTTTTCAT	406695	False	NA	26	True	AATAAA	-19	NA	408342	410764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_408780_410411
transcript_88306.known	chr20	-	2822	14	FSM	ENSG00000101266.19	ENST00000643660.1	2822	14	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	212.686423621489	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCACTGAATATCTGTGTC	-525542	True	NA	-14	True	NA	NA	NA	543732	472507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_473951_483927_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_88308.known	chr20	-	4290	14	FSM	ENSG00000101266.19	ENST00000645910.1	4290	14	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	285.650177084908	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGTCTTTAATTTTTTTTAA	-525569	True	NA	-9	True	ACTAAA	-34	NA	543759	481149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_508450_508661_543671
transcript_88310.known	chr20	-	12984	14	FSM	ENSG00000101266.19	ENST00000217244.9	12984	14	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_12	269.9979618595	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	-525600	True	NA	-4	True	NA	NA	NA	543790	472497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_527932_528050_543671
transcript_88314.known	chr20	-	2319	13	FSM	ENSG00000101266.19	ENST00000644003.1	2319	13	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	342.04997807338	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGGTAGGAGCAGAGCCACTA	-525545	True	NA	-107	True	NA	NA	NA	543735	482886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499524_499631_499832_499935_505117_505230_543671
transcript_88315.known	chr20	-	12912	13	FSM	ENSG00000101266.19	ENST00000646561.1	12912	13	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_12	64.1501602145743	592	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTGTGTCTGAGTACTCC	NA	False	NA	-4	True	NA	NA	NA	543835	472497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_88321.known	chr20	-	4047	12	FSM	ENSG00000101266.19	ENST00000349736.10	4047	12	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_11	225.186570948485	1137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGTCCCTGCAGCCTGAG	-525602	True	NA	31	True	AATAAA	-17	NA	543792	481109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_543671
transcript_88322.known	chr20	-	2545	12	FSM	ENSG00000101266.19	ENST00000642689.1	2545	12	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_8	230.766813719065	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGGTTTTATTTATCAAGGT	-525542	True	NA	-29	True	AATAAA	-4	NA	543732	482710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484077_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499832_499935_505117_505230_508450_508661_543671
transcript_88332.known	chr20	-	2018	4	FSM	ENSG00000101266.19	ENST00000609606.6	2018	4	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_3	39.8859485143439	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-525600	True	NA	NA	False	NA	NA	NA	543790	498357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_499935_505117_505230_508450_508661_543671
transcript_88334.known	chr20	-	1419	3	FSM	ENSG00000101266.19	ENST00000642160.1	1419	3	0	0	0	0	multi-exon	FALSE	canonical	3	663	junction_2	41	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTCGCCCAGGCTGGA	-525626	True	NA	NA	False	NA	NA	NA	543816	504165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_505230_508450_508661_543671
transcript_88337.nic	chr20	-	315	2	ISM	ENSG00000101266.19	ENST00000608066.6	616	5	-92	10304	-5	-1723	5prime_fragment	FALSE	canonical	3	7	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATAGGTATATTCTCTTAA	-525631	True	NA	NA	False	NA	NA	NA	543821	510173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_510339_543671
transcript_88339.known	chr20	-	2586	13	FSM	ENSG00000101266.19	ENST00000645234.1	2586	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217.242504026159	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGTTTGGTTTTATTTATCA	-525522	True	NA	-33	True	NA	NA	NA	543712	482714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_484091_486375_486463_487426_487576_488677_488779_489779_489882_492253_492365_495718_495803_497720_497781_499254_499306_499832_499935_505117_505230_508450_508661_543671
transcript_88341.known	chr20	-	2654	6	FSM	ENSG00000101276.18	ENST00000217254.11	2654	6	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_4	10.507140429251	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTCAGATCTTCCTTCAAA	-775644	False	NA	-7	True	AATAAA	-18	NA	776015	760079	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_761239_761700_761825_763497_764004_765207_765826_768296_768483_775954
transcript_88342.known	chr20	-	911	3	FSM	ENSG00000101276.18	ENST00000674666.1	911	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	13.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGGTCATCCAGCTGGCCA	-775614	True	NA	NA	False	NA	NA	NA	775985	765640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_766335_768296_768483_775954
transcript_88345.known	chr20	+	8154	7	FSM	ENSG00000125818.18	ENST00000335877.11	8154	7	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_6	34.1402336775183	463	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTATTAGAGTTTTGACTCT	1109711	True	NA	NA	False	ATTAAA	-23	NA	1118601	1172246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1165028
transcript_88346.known	chr20	+	2042	7	FSM	ENSG00000125818.18	ENST00000246015.8	2042	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_6	221.092300986614	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCCTTTTTTAAATAGCAGC	1109707	True	NA	20	True	AATAAA	-24	NA	1118597	1167328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1118903_1125497_1125651_1127425_1127509_1135120_1135307_1163129_1163184_1164317_1164477_1166226
transcript_88358.known	chr20	-	582	2	FSM	ENSG00000125895.6	ENST00000481747.1	582	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGCCCGTGAGCCGCCCGG	-1185328	False	NA	NA	False	NA	NA	NA	1185415	1181283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1181588_1185137
transcript_88359.known	chr20	-	209	2	FSM	ENSG00000286787.2	ENST00000620712.2	294	2	26	59	17	-59	multi-exon	FALSE	canonical	2	5	junction_1	0	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGTTTCATGAAATCCACT	-1118360	True	NA	NA	False	NA	NA	NA	1118450	1117846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1117989_1118383
transcript_88363.nnic	chr20	-	854	6	NNC	ENSG00000088832.18	novel	1514	5	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1211.59719379008	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363161	True	NA	-6	True	AATAAA	-25	NA	1393121	1368977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_1369040_1369766_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_88364.known	chr20	-	1261	5	FSM	ENSG00000125775.15	ENST00000381808.7	1261	5	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_3	5.1234753829798	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	-1313431	True	NA	NA	False	AATAAA	-20	NA	1313639	1309974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339
transcript_88367.known	chr20	-	1514	5	FSM	ENSG00000088832.18	ENST00000400137.9	1514	5	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_4	263.802009090151	1961	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363094	True	NA	-6	True	AATAAA	-25	NA	1393054	1368977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833_1392882_1392961
transcript_88374.known	chr20	-	1520	4	FSM	ENSG00000088832.18	ENST00000439640.5	1520	4	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_3	1463.7313809424	1526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363148	True	NA	-6	True	AATAAA	-25	NA	1393108	1368977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392961
transcript_88375.known	chr20	-	1452	4	FSM	ENSG00000088832.18	ENST00000618612.5	1452	4	0	0	0	0	multi-exon	FALSE	canonical	3	230	junction_2	1198.68381522772	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTCTGTGTCATGGTGGTTA	-1363145	True	NA	-6	True	AATAAA	-25	NA	1393105	1368977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1392833_1392882_1392961
transcript_88378.known	chr20	-	3564	4	FSM	ENSG00000088832.18	ENST00000381719.8	3564	4	0	0	0	0	multi-exon	FALSE	canonical	3	2573	junction_3	303.611959945952	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTATGCCGGCTTTTCT	-1363163	True	NA	-28	True	AATAAA	-3	NA	1393123	1368999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1372241_1375490_1375604_1392833_1392882_1392961
transcript_88380.known	chr20	+	413	3	FSM	ENSG00000234684.8	ENST00000665859.2	438	3	21	4	0	-4	multi-exon	FALSE	canonical	2	8	junction_1	1	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTATCTGAATTGATC	1324599	True	NA	-1	True	AATAAA	-14	NA	1325420	1359859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1325530_1350338_1350482_1359698
transcript_88382.known	chr20	+	808	3	FSM	ENSG00000234684.8	ENST00000607947.1	808	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATCCGCACCACTTTGCA	1324597	True	NA	NA	False	NA	NA	NA	1325418	1361631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1325530_1359698_1359821_1361056
transcript_88387.known	chr20	-	1579	4	FSM	ENSG00000088832.18	ENST00000677937.1	1579	4	0	0	0	0	multi-exon	FALSE	canonical	3	2934	junction_1	149.622487911707	1550	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTGTCATGGTGGTTAT	-1363078	True	NA	-5	True	AATAAA	-26	NA	1393038	1368976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1392833
transcript_88388.known	chr20	+	2413	5	FSM	ENSG00000234684.8	ENST00000670879.1	2413	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.55521678957215	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGGTCTTCAGTTACCT	1324599	True	NA	NA	False	AATAAA	-19	NA	1325420	1378735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_1325530_1350338_1350482_1359698_1359821_1373077_1373179_1376797
transcript_88389.known	chr20	-	497	4	FSM	ENSG00000088832.18	ENST00000677078.1	497	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1347.64419966432	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTTAAAGTAGAAATCTCT	-1363113	True	NA	NA	False	AATATA	-12	NA	1393073	1372917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1373142_1375490_1375604_1392833_1392882_1392961
transcript_88390.known	chr20	-	376	4	FSM	ENSG00000088832.18	ENST00000614856.2	376	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1348.11003507379	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGCTTTCACACACATACT	-1363114	True	NA	NA	False	TATAAA	-15	NA	1393074	1375283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1375430_1375534_1375604_1392833_1392882_1392961
transcript_88391.known	chr20	-	1404	9	FSM	ENSG00000125775.15	ENST00000339987.7	1404	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	10.4335696192626	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGTCCGCAAAGGTAATT	NA	False	NA	NA	False	AATAAA	-20	NA	1325869	1309974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1310496_1310799_1310892_1312336_1312509_1312586_1312763_1313339_1313499_1318317_1318419_1319589_1319660_1320362_1320436_1325829
transcript_88392.known	chr20	-	1591	6	FSM	ENSG00000088832.18	ENST00000678136.1	1591	6	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_3	1441.085785094	1498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCAGCTCTGTGTCATGGT	-1363094	True	NA	-11	True	AATAAA	-20	NA	1393054	1368982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1370073_1372075_1372241_1375490_1375604_1377429_1377512_1392833_1392882_1392961
transcript_88394.known	chr20	-	2588	8	FSM	ENSG00000088833.18	ENST00000555944.5	2588	8	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_7	410.37951573973	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455343	True	NA	4	True	ATTAAA	-22	NA	1466905	1442161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455038_1458199_1458275_1466719
transcript_88399.known	chr20	-	450	2	FSM	ENSG00000088833.18	ENST00000555359.1	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCAGTCCCACTTTTTGGTAT	-1455287	True	NA	NA	False	NA	NA	NA	1466849	1457954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1458275_1466719
transcript_884.nnic	chr1	-	632	3	NNC	ENSG00000078808.19	novel	2095	7	NA	NA	-17	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	226.5	28	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGCCTTTTTTGGTCAGCT	-1225957	True	NA	16	True	AATATA	-1	NA	1232048	1216930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_1217003_1228543_1228947_1231891
transcript_88400.known	chr20	-	2721	9	FSM	ENSG00000088833.18	ENST00000216879.9	2721	9	0	0	0	0	multi-exon	FALSE	canonical	3	700	junction_6	109.321772762794	649	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGAGTTTTGTACTTTCTAA	-1455287	True	NA	0	True	ATTAAA	-18	NA	1466849	1442165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1458199_1458275_1464328_1464427_1466719
transcript_88401.known	chr20	-	2800	10	FSM	ENSG00000088833.18	ENST00000476071.5	2800	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	408.401702515163	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGTACTTTCTAATGGG	-1455356	True	NA	4	True	ATTAAA	-22	NA	1466918	1442161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1443912_1445665_1445831_1452492_1452631_1453030_1453141_1454212_1454306_1454966_1455133_1455713_1455720_1458199_1458275_1464328_1464427_1466719
transcript_88404.known	chr20	-	2556	4	FSM	ENSG00000101327.9	ENST00000217305.3	2556	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	2.16024689946929	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTTGGTGGGTGTGTGTG	-1994030	True	NA	NA	False	AATAAA	-18	NA	1994058	1978758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_1980959_1982955_1983104_1992583_1992644_1993910
transcript_88405.known	chr20	+	536	2	FSM	ENSG00000226644.5	ENST00000411839.1	536	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	2207203	False	NA	3	True	ATTAAA	-14	NA	2207226	2213151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2207520_2212908
transcript_88406.known	chr20	+	415	2	FSM	ENSG00000226644.5	ENST00000447956.5	415	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTTGATGGTGTTGACTA	2207193	False	NA	3	True	ATTAAA	-14	NA	2207216	2213151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2207389_2212908
transcript_8843.known	chr1	+	678	5	FSM	ENSG00000116459.11	ENST00000483994.1	678	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1169.57748781344	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTTGACTGACTAAATGGAA	111427446	True	NA	-17	True	NA	NA	NA	111449483	111461026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_8844.known	chr1	+	2628	7	FSM	ENSG00000116459.11	ENST00000369722.8	2628	7	0	0	0	0	multi-exon	FALSE	canonical	3	2551	junction_3	79.2178781729366	10411	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAGTTTGTGCTAAGCAAC	111427426	True	NA	NA	False	ATTAAA	-18	NA	111449463	111462773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111449836_111449874_111454210_111454357_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_8845.known	chr1	-	2456	10	FSM	ENSG00000116455.14	ENST00000235090.10	2456	10	0	0	0	0	multi-exon	FALSE	canonical	3	645	junction_1	63.5889578115222	732	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTGTGATCCTCTGGCGT	-111445394	True	NA	-6	True	AGTAAA	-16	NA	111449256	111439889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111441390_111442024_111442094_111442652_111442762_111443322_111443395_111443866_111443922_111444053_111444125_111447094_111447145_111447434_111447577_111448618_111448805_111449054
transcript_88452.known	chr20	-	1008	7	FSM	ENSG00000125835.20	ENST00000438552.6	1008	7	0	0	0	0	multi-exon	FALSE	canonical	3	1774	junction_1	1204.088728735	19173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATGGATCTTTATTTTTA	-2435153	True	NA	NA	False	AATAAA	-26	NA	2470853	2461633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_88453.known	chr20	-	1082	7	FSM	ENSG00000125835.20	ENST00000381342.7	1082	7	0	0	0	0	multi-exon	FALSE	canonical	3	3337	junction_1	655.225851647099	31360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAATTGCACCTATGGATCTT	-2435089	True	NA	NA	False	AATAAA	-18	NA	2470789	2461641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2461940_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467606_2467759_2470687
transcript_88454.known	chr20	-	985	8	FSM	ENSG00000125835.20	ENST00000474384.2	985	8	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_6	2232.25784846662	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTCTTAAGAGAACATTATA	-2435032	True	NA	NA	False	NA	NA	NA	2470732	2461659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2461794_2462635_2462762_2463088_2463228_2463746_2463900_2465707_2465820_2467191_2467316_2467606_2467759_2470687
transcript_88455.known	chr20	-	819	6	FSM	ENSG00000088876.13	ENST00000381253.5	819	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	13.5793961574144	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGGGTTGATAAATGTTAT	-2508354	True	NA	NA	False	AATAAA	-23	NA	2508915	2491840	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2492085_2492698_2492826_2493518_2493578_2493777_2494045_2500655_2500743_2508880
transcript_88456.nnic	chr20	-	643	3	Antisense	novelGene_ENSG00000149488.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGATGGTTGGTTTGTGT	-2652259	True	NA	NA	False	CATAAA	-17	NA	2652464	2643468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_2643866_2644240_2644382_2652359
transcript_8846.known	chr1	+	859	6	FSM	ENSG00000116459.11	ENST00000468818.1	859	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	1072.83985757428	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTGACAATTGAATGAAACA	111427447	True	NA	-5	True	TTTAAA	-31	NA	111449484	111461312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111449836_111449874_111456226_111456250_111456629_111456756_111459456_111459637_111460916
transcript_88466.known	chr20	+	1913	12	FSM	ENSG00000101361.17	ENST00000329276.10	1913	12	0	0	0	0	multi-exon	FALSE	canonical	3	365	junction_1	236.043524491873	1177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2645934	True	NA	14	True	AATAAA	-16	NA	2652631	2658393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_8847.known	chr1	+	1040	6	FSM	ENSG00000116459.11	ENST00000369721.8	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_2	1033.70583823446	3243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTTTTTCAAGTTGTATAA	111427427	True	NA	15	True	AATAAA	-20	NA	111449464	111461332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111449582_111449836_111449874_111456085_111456250_111456629_111456756_111459456_111459637_111460916
transcript_88474.nic	chr20	+	1515	11	ISM	ENSG00000101361.17	ENST00000651302.1	1768	14	-28	821	-28	0	5prime_fragment	FALSE	canonical	3	365	junction_1	186.754384152019	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTAGGCAGCACGGCCC	NA	False	NA	5	True	AAAACA	-27	NA	2652564	2657218	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_2652664_2652841_2652932_2653278_2653394_2654413_2654576_2654748_2654948_2655324_2655513_2655594_2655747_2655933_2656035_2656400_2656550_2656773_2656896_2657080
transcript_8848.known	chr1	-	415	2	FSM	ENSG00000243960.1	ENST00000445680.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTACTGGTTCACAATCAT	-111441351	False	51	-1	True	AATAAA	-17	NA	111441364	111438637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111438826_111441137
transcript_885.nnic	chr1	-	919	8	NNC	ENSG00000184163.3	novel	1036	8	NA	NA	-537	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_7	4.59369576880387	17	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTGCCTTCGAGTGCTG	-1247244	False	NA	-6	True	AATAAA	-16	NA	1247259	1242452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_1242647_1242834_1242914_1243061_1243153_1243443_1243553_1243953_1244106_1244190_1244276_1244380_1244498_1247167
transcript_8850.nic	chr1	+	1545	9	FSM	ENSG00000116473.15	ENST00000687939.1	5101	9	1	3555	1	0	multi-exon	FALSE	canonical	2	12	junction_2	82.479921799187	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTGGTTTGTGTGTTTTTG	111617504	True	NA	25	True	ATTAAA	-40	NA	111619777	111713113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111619935_111627469_111627564_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_8851.known	chr1	+	5024	8	FSM	ENSG00000116473.15	ENST00000369709.4	5018	8	-6	0	6	0	multi-exon	FALSE	canonical	3	169	junction_1	12.328828005938	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGGTGTGACTCTTATTT	111617509	True	NA	8	True	AATAAA	-16	NA	111619782	111716691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111619935_111691333_111691418_111695340_111695410_111697440_111697498_111703335_111703477_111704342_111704487_111709148_111709265_111712430
transcript_88517.known	chr20	+	1143	5	FSM	ENSG00000101361.17	ENST00000492135.5	1143	5	0	0	0	0	multi-exon	FALSE	canonical	3	398	junction_1	281.20855250152	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2655931	False	NA	14	True	AATAAA	-16	NA	2655945	2658393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657928
transcript_88518.known	chr20	+	859	3	FSM	ENSG00000101361.17	ENST00000462630.5	859	3	0	0	0	0	multi-exon	FALSE	canonical	3	975	junction_1	87.5	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2656616	False	NA	14	True	AATAAA	-16	NA	2656639	2658393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2656896_2657080_2657219_2657928
transcript_88519.known	chr20	+	735	2	FSM	ENSG00000101361.17	ENST00000467857.1	735	2	0	0	0	0	multi-exon	FALSE	canonical	3	1150	junction_1	0	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2656667	False	NA	14	True	AATAAA	-16	NA	2656948	2658393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2657219_2657928
transcript_88520.known	chr20	+	1094	6	FSM	ENSG00000101361.17	ENST00000466447.5	1094	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	381.236094828389	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGGTTCATGTTCTTTATT	2655940	True	NA	14	True	AATAAA	-16	NA	2656110	2658393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2656215_2656400_2656550_2656773_2656896_2657080_2657219_2657372_2657489_2657928
transcript_88523.known	chr20	-	1542	12	FSM	ENSG00000101365.21	ENST00000380843.9	1542	12	0	0	0	0	multi-exon	FALSE	canonical	3	621	junction_1	72.8308353550362	3686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651986	True	NA	-5	True	AATAAA	-14	NA	2664216	2658394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_88524.known	chr20	-	1279	13	FSM	ENSG00000101365.21	ENST00000474315.5	1279	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	220.847609601432	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651959	True	NA	-5	True	AATAAA	-14	NA	2664189	2658394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658523_2658758_2658838_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_88525.known	chr20	-	1230	12	FSM	ENSG00000101365.21	ENST00000380851.9	1230	12	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_1	184.563545911263	909	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTGTGAATTTGTTTTTA	-2651989	False	NA	-5	True	AATAAA	-14	NA	2664219	2658394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2658523_2659524_2659586_2659698_2659794_2660029_2660177_2660262_2660366_2660456_2660591_2660696_2660830_2660908_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_88526.known	chr20	-	823	5	FSM	ENSG00000101365.21	ENST00000491065.1	823	5	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_4	67.3591122269289	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGAAGGGGCGGGGCAAGG	-2651979	True	NA	NA	False	NA	NA	NA	2664209	2660504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2660970_2663445_2663567_2663659_2663759_2663924_2664006_2664152
transcript_88527.nnic	chr20	-	701	2	Antisense	novelGene_ENSG00000088881.21_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTTGGAGTCGGTTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	2709912	2703743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_2704043_2709510
transcript_88529.known	chr20	+	2708	24	FSM	ENSG00000215305.10	ENST00000380445.8	2708	24	0	0	0	0	multi-exon	TRUE	canonical	3	85	junction_10	18.074514951645	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839607	True	NA	22	True	AATAAA	-15	NA	2840744	2866732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862578_2862711_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_88533.nnic	chr20	+	2621	23	NIC	ENSG00000215305.10	novel	2708	24	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_11	28.6965097080026	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839562	True	NA	22	True	AATAAA	-15	NA	2840699	2866732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2861804_2861900_2862053_2862131_2862806_2862935_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_88536.known	chr20	+	2318	20	FSM	ENSG00000215305.10	ENST00000380469.7	2318	20	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	30.6600518780291	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2839565	True	NA	22	True	AATAAA	-15	NA	2840702	2866732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2840828_2859718_2859808_2860053_2860152_2860238_2860368_2860448_2860594_2860747_2860864_2860969_2861093_2861224_2861281_2861614_2861705_2863064_2863101_2863289_2863399_2863948_2864084_2864178_2864288_2864364_2864463_2864546_2864655_2864977_2865056_2865147_2865318_2865398_2865496_2866211_2866316_2866429
transcript_88538.known	chr20	-	1706	8	FSM	ENSG00000132635.17	ENST00000356872.7	1706	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	25.5342906696074	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2841166	True	NA	-1	True	AATAAA	-25	NA	2841190	2835313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2838930_2839191_2839272_2839788_2839934_2840865
transcript_88539.known	chr20	-	1979	8	FSM	ENSG00000132635.17	ENST00000360652.7	1979	8	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_5	14.577029735799	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTGTGTGCAGTGGGTAT	-2840133	True	NA	-1	True	AATAAA	-25	NA	2840655	2835313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_2835710_2836038_2836315_2838231_2838479_2838595_2838747_2838843_2839083_2839191_2839272_2839788_2839934_2840210
transcript_88541.nnic	chr20	+	507	2	NNC	ENSG00000215305.10	novel	819	9	NA	NA	-3	-18581	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	0	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGGAAATGATTTCAACTT	2839562	True	NA	2	True	ATTAAA	-15	NA	2840699	2843512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_2840828_2843133
transcript_88542.known	chr20	+	708	2	FSM	ENSG00000215305.10	ENST00000466415.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGCTTGTCTTACACAGT	2865900	False	NA	22	True	AATAAA	-15	NA	2865910	2866732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_2866316_2866429
transcript_88546.known	chr20	+	1016	4	FSM	ENSG00000125901.6	ENST00000380325.4	1016	4	0	0	0	0	multi-exon	FALSE	canonical	3	1465	junction_3	70.6179077068196	2306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	3028829	True	NA	26	True	AATAAA	-17	NA	3046051	3048250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3046281_3046372_3046520_3046613_3046738_3047734
transcript_88548.nic	chr20	+	1077	3	NIC	ENSG00000125901.6	novel	1016	4	NA	NA	31	0	intron_retention	FALSE	canonical	3	1465	junction_2	5.5	2016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACACCCACTCATTGACT	3028860	True	NA	26	True	AATAAA	-17	NA	3046082	3048250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_3046520_3046613_3046738_3047734
transcript_88550.known	chr20	+	513	3	FSM	ENSG00000101405.3	ENST00000217386.2	513	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGACTCGTGTCTAAGTG	NA	False	NA	3	True	AATAAA	-24	NA	3071619	3072517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3071776_3072076_3072279_3072362
transcript_88552.known	chr20	-	4300	5	FSM	ENSG00000185019.17	ENST00000217173.7	4300	5	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_1	18.8547076349648	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3154860	True	NA	0	True	AATAAA	-17	NA	3159865	3107572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3110315_3115304_3115467_3121383_3122585_3123311_3123407_3159765
transcript_88553.known	chr20	-	4469	4	FSM	ENSG00000185019.17	ENST00000348031.6	4469	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	21.7613316585993	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGCTCTGAAGGCAGTTT	-3160164	False	NA	0	True	AATAAA	-17	NA	3160196	3107572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3110315_3121383_3122585_3123311_3123407_3159765
transcript_88555.known	chr20	-	2842	2	FSM	ENSG00000215251.5	ENST00000380266.4	2842	2	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	0	292	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTTGGATTTTTCTT	-3154860	True	NA	-1	True	AATAAA	-29	NA	3159865	3146518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3149261_3159765
transcript_88560.known	chr20	-	1303	9	FSM	ENSG00000198171.13	ENST00000354488.8	1303	9	0	0	0	0	multi-exon	FALSE	canonical	3	468	junction_5	36.1731944953718	1185	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTGTTTCTTTGTGCCCTG	-3194549	True	NA	-4	True	AAGAAA	-20	NA	3204682	3190349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3190820_3191189_3191239_3191764_3191822_3194829_3194869_3195230_3195354_3200000_3200103_3200341_3200455_3203212_3203417_3204536
transcript_88577.known	chr20	+	729	8	FSM	ENSG00000125877.13	ENST00000455664.6	729	8	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	239.606650447719	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTCTGCTCTGAGAAACTC	3203334	True	NA	NA	False	NA	NA	NA	3209512	3223618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209567_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_88589.known	chr20	+	1028	7	FSM	ENSG00000125877.13	ENST00000483354.5	1028	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	344.26415084286	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3208790	True	NA	34	True	AATAAA	-31	NA	3208867	3223870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209034_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_88597.known	chr20	+	977	7	FSM	ENSG00000125877.13	ENST00000490838.6	977	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	270.900607029384	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203310	True	NA	34	True	AATAAA	-31	NA	3209488	3223870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209536_3213257_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_8860.known	chr1	+	2393	3	FSM	ENSG00000227811.3	ENST00000658759.1	2393	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTCACAATGTGTATCCATA	111739531	True	NA	NA	False	AATAGA	-26	NA	111739578	111747798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111740078_111744374_111744530_111746059
transcript_88609.known	chr20	+	897	6	FSM	ENSG00000125877.13	ENST00000399838.3	897	6	0	0	0	0	multi-exon	TRUE	canonical	3	140	junction_1	241.43852219561	1342	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203346	True	NA	34	True	AATAAA	-31	NA	3209524	3223870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_8862.known	chr1	+	2240	3	FSM	ENSG00000227811.3	ENST00000430373.2	2240	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAATAGAACAAGGACATCC	111739672	False	NA	NA	False	AATAAA	-20	NA	111739719	111747765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111740099_111744374_111744530_111746059
transcript_88620.known	chr20	+	924	5	FSM	ENSG00000125877.13	ENST00000609835.5	924	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	292.446148888988	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCAGACTTCTCTAACCTCA	3203322	True	NA	NA	False	NA	NA	NA	3209500	3219091	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213257_3213384_3213984_3214059_3215280_3215313_3218516
transcript_88624.known	chr20	+	1037	8	FSM	ENSG00000125877.13	ENST00000380113.8	1037	8	0	0	0	0	multi-exon	FALSE	canonical	3	536	junction_2	95.8208362156229	4244	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTGCCCCAGGCAGGTGTC	3203319	True	NA	24	True	AATAAA	-21	NA	3209497	3223860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213168_3213227_3213318_3213384_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_88625.known	chr20	+	967	7	FSM	ENSG00000125877.13	ENST00000460550.5	967	7	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	265.374839718379	396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCAGGTGTCTGTCTCAGTC	3203334	True	NA	34	True	AATAAA	-31	NA	3209512	3223870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3209618_3213168_3213227_3213984_3214059_3215280_3215313_3218516_3218633_3221840_3221918_3223365
transcript_88627.known	chr20	-	3046	20	FSM	ENSG00000088836.14	ENST00000642402.1	3046	20	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_19	24.3187512436363	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTATGTGCCACCTGTGTC	-3238259	True	NA	-10	True	AATAAA	-17	NA	3239190	3227421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3227857_3228258_3228429_3228511_3228708_3228837_3229012_3229094_3229264_3229345_3229453_3229523_3229777_3230186_3230261_3230514_3230648_3230731_3230846_3230932_3231059_3231148_3231243_3231329_3231549_3233513_3233638_3233920_3234003_3234082_3234315_3234567_3234618_3234741_3234895_3237543_3237589_3239094
transcript_88630.nic	chr20	-	914	7	ISM	ENSG00000088854.13	ENST00000252032.10	6912	37	24	110074	24	-63886	5prime_fragment	FALSE	canonical	3	14	junction_4	2.69258240356725	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTATTGTCTTGAATTCCTTG	-3406902	True	NA	NA	False	AATAGA	-17	NA	3407645	3359379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_3359594_3374047_3374155_3375029_3375127_3376177_3376303_3381378_3381499_3382426_3382507_3407474
transcript_88631.nic	chr20	-	1014	3	ISM	ENSG00000149451.19	ENST00000350009.6	3480	21	15	8445	15	-8444	5prime_fragment	FALSE	canonical	3	7	junction_1	3	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAGAAAAGAAAAAAGAAA	-3681831	True	NA	NA	False	AAAAAG	-29	NA	3682116	3676418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_3677144_3679491_3679572_3681907
transcript_8864.nnic	chr1	+	729	3	NNC	ENSG00000227811.3	novel	2393	3	NA	NA	559	-111	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TAGTCTTTTGTGTTTCTGCC	111740336	True	NA	NA	False	AATAGA	-24	NA	111740411	111746502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_111740543_111744374_111744530_111746059
transcript_88642.known	chr20	-	1734	6	FSM	ENSG00000101220.18	ENST00000399672.5	1734	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	484.126264521974	313	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743560	True	NA	-4	True	AATAAA	-19	NA	3767781	3753507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767208
transcript_88651.known	chr20	-	1252	6	FSM	ENSG00000101220.18	ENST00000379772.4	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1125	junction_5	54.5615249053763	4217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743532	True	NA	-4	True	AATAAA	-19	NA	3767753	3753507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760081_3760187_3767662
transcript_88652.known	chr20	-	1302	6	FSM	ENSG00000101220.18	ENST00000217195.12	1302	6	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_4	460.515189760338	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCAGGTGGATTTTTGTTC	-3743507	True	NA	-4	True	AATAAA	-19	NA	3767728	3753507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3754159_3754396_3754520_3755468_3755608_3758535_3758679_3760006_3760187_3767662
transcript_88653.known	chr20	+	1960	16	FSM	ENSG00000101224.18	ENST00000467519.5	1960	16	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	22.3620710629007	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTTCTTGTTTCCTTGTTA	3795710	False	NA	21	True	NA	NA	NA	3795738	3805237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3795880_3797621_3797750_3798411_3798464_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_88654.nnic	chr20	+	2771	14	NNC	ENSG00000101224.18	novel	807	9	NA	NA	-1379	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_1	25.1793566240283	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCATTGTGTCCTGTGGG	3799490	True	NA	30	True	AATAAA	-21	NA	3799691	3806115	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_3799946_3800287_3800330_3800461_3800499_3800742_3800866_3800970_3801094_3801253_3801389_3801721_3801803_3801923_3802101_3802280_3802377_3802909_3802973_3803107_3803207_3803403_3803538_3804568_3804681_3804820
transcript_88655.known	chr20	+	1791	3	FSM	ENSG00000125843.11	ENST00000379567.6	1791	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	4	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTCTTTCTGTGAGTTTGA	3820248	True	NA	9	True	ATTAAA	-22	NA	3820535	3825302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3820703_3822101_3822294_3823870
transcript_88656.known	chr20	+	5372	3	FSM	ENSG00000125843.11	ENST00000615891.2	5372	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTGTACAGGTTTTTGTG	3820259	True	NA	NA	False	AATACA	-14	NA	3820546	3828838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3820759_3822101_3822294_3823870
transcript_88658.known	chr20	+	584	3	FSM	ENSG00000125843.11	ENST00000455742.5	584	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTGCCGCTGCACGAGGCCC	3820259	True	NA	NA	False	NA	NA	NA	3820546	3823954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3820855_3822101_3822294_3823870
transcript_88663.known	chr20	+	11731	7	FSM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	11.2051575426477	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTACAGTTATAATGGTCTAC	3844180	True	NA	12	True	AATAAA	-23	NA	3846833	3876118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3846904_3854557_3854742_3857634_3857810_3861331_3861505_3862253_3862414_3864255_3864789_3865682
transcript_88664.nic	chr20	+	589	3	ISM	ENSG00000088888.18	ENST00000428216.4	11731	7	0	18149	0	-18149	5prime_fragment	FALSE	canonical	3	70	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTGTCCCTTTGGCC	3844180	True	NA	NA	False	AATAAA	-31	NA	3846833	3857969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_3846904_3854557_3854742_3857634
transcript_8867.known	chr1	-	501	3	FSM	ENSG00000197852.12	ENST00000527570.1	501	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTCCTGTATGAGGCGTCT	-111738193	True	NA	NA	False	NA	NA	NA	111739403	111680629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111680775_111686545_111686684_111739185
transcript_88675.known	chr20	+	4815	7	FSM	ENSG00000125779.24	ENST00000497424.5	4815	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	129.931605940288	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATCCGCTATTTCAGGTCA	3888691	True	NA	NA	False	NA	NA	NA	3888838	3926958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3888905_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_88683.known	chr20	+	1843	7	FSM	ENSG00000125779.24	ENST00000336066.8	1843	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	124.27176759917	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3880999	True	NA	-25	True	NA	NA	NA	3889388	3923855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3889729_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_8869.known	chr1	+	779	2	FSM	ENSG00000227811.3	ENST00000524935.1	779	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCCTCACAGAAAGACTGGAA	111739822	False	NA	NA	False	NA	NA	NA	111739852	111746613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_111740078_111746059
transcript_88690.known	chr20	+	1763	7	FSM	ENSG00000125779.24	ENST00000621507.1	1763	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	125.755052913723	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCCACGTTACTTTACACT	3889602	True	NA	-25	True	NA	NA	NA	3889815	3923855	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3889933_3907925_3908279_3910576_3910831_3912457_3912635_3916926_3917051_3918670_3918797_3923243
transcript_88699.known	chr20	-	7328	6	FSM	ENSG00000101236.17	ENST00000358395.11	7328	6	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_5	9.40212741883453	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTGTTGTGCATATGCCTT	-4014104	True	NA	-2	True	AATAAA	-17	NA	4015558	3927310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3934202_3934993_3935074_3945176_3945219_3948236_3948280_3963874_3964025_4015436
transcript_88708.known	chr20	-	441	2	FSM	ENSG00000229539.1	ENST00000451507.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAAAGAGTGCCTCCCTG	-3888852	False	NA	NA	False	AATAAA	-4	NA	3888868	3888238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_3888550_3888738
transcript_88709.known	chr20	+	967	6	FSM	ENSG00000125779.24	ENST00000495692.5	967	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	157.624871133968	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACGAGGTAAGCTGACTTG	3888786	False	NA	NA	False	NA	NA	NA	3888933	3918789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_3889017_3907925_3908136_3910576_3910831_3912457_3912635_3916926_3917051_3918670
transcript_88710.known	chr20	+	2074	8	FSM	ENSG00000088826.18	ENST00000339123.10	2074	8	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	21.0964742193997	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTCTGTGTATGTGTGTGT	4148205	True	NA	42	True	AATAAA	-45	NA	4148778	4187747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182324_4182482_4182849_4183493_4183655_4187269
transcript_88713.known	chr20	+	2164	7	FSM	ENSG00000088826.18	ENST00000305958.9	2164	7	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_1	7.6029964853047	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTCTCTCTGGTTTTCTCA	4148254	True	NA	22	True	AATAAA	-25	NA	4148827	4187727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4148978_4175029_4175264_4177350_4177578_4181802_4181977_4182088_4182849_4183493_4183655_4187269
transcript_88715.known	chr20	+	2429	2	FSM	ENSG00000171867.18	ENST00000424424.2	2429	2	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	0	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4684342	True	NA	16	True	ATTAAA	-22	NA	4686458	4701590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686513_4699215
transcript_88716.known	chr20	+	2435	2	FSM	ENSG00000171867.18	ENST00000379440.9	2435	2	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_1	0	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCCCGTGTCTGCAGTTGT	4684339	True	NA	14	True	ATTAAA	-20	NA	4686455	4701588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686513_4699210
transcript_88717.known	chr20	+	2574	2	FSM	ENSG00000171867.18	ENST00000457586.2	2574	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4684426	False	NA	16	True	ATTAAA	-22	NA	4686542	4701590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686737_4699210
transcript_88718.known	chr20	+	2539	2	FSM	ENSG00000171867.18	ENST00000430350.2	2539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTCTGCAGTTGTAT	4686214	False	NA	16	True	ATTAAA	-22	NA	4686349	4701590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4686509_4699210
transcript_88719.known	chr20	+	397	1	FSM	ENSG00000278595.1	ENST00000617466.1	397	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCATTCTGAGCAGCGTGA	4761288	False	NA	NA	False	AATAAA	-22	NA	4761299	4761696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_4761300_4761700
transcript_8872.known	chr1	-	5951	2	FSM	ENSG00000197852.12	ENST00000357260.6	5951	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCAGATTCCCTCTGAA	-111738185	True	NA	-8	True	AATAAA	-18	NA	111739395	111722063	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111727805_111739185
transcript_88723.known	chr20	-	5390	12	FSM	ENSG00000101265.16	ENST00000379400.8	5390	12	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_11	6	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCCCCGTGGATGGGTCT	-4823598	False	403	-11	True	AATAAA	-17	NA	4823608	4780022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_4784343_4786230_4786329_4787632_4787755_4788216_4788269_4789595_4789698_4790450_4790612_4792538_4792628_4795814_4795967_4798009_4798086_4800971_4801063_4822328_4822404_4823556
transcript_88732.known	chr20	-	1735	5	FSM	ENSG00000089063.15	ENST00000379286.6	1735	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	613.034460695318	295	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101437	False	11605	-10	True	AATAAA	-29	NA	5113042	5099839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112742
transcript_88733.known	chr20	-	1541	5	FSM	ENSG00000089063.15	ENST00000342308.10	1541	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	609.018267377917	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTCAGAAAACATTTTAATG	-5101471	False	11605	-20	True	AATAAA	-19	NA	5113076	5099849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111499_5111606_5112960
transcript_88734.known	chr20	-	1536	5	FSM	ENSG00000089063.15	ENST00000379277.6	1536	5	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_4	602.901888784568	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101299	False	33	-10	True	AATAAA	-29	NA	5112904	5099839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5111763_5111809_5112742
transcript_8874.known	chr1	-	1423	2	FSM	ENSG00000197852.12	ENST00000444059.2	1423	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTTCTGTCAGCTTCTTTGG	-111755800	True	NA	2	True	AATAAA	-23	NA	111755824	111726505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_111727805_111755700
transcript_88745.known	chr20	-	1472	4	FSM	ENSG00000089063.15	ENST00000202834.11	1472	4	0	0	0	0	multi-exon	FALSE	canonical	3	1001	junction_3	109.259121154966	4063	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101498	False	11605	-10	True	AATAAA	-29	NA	5113103	5099839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112960
transcript_8875.known	chr1	-	5603	3	FSM	ENSG00000231246.3	ENST00000659549.1	5603	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATATTGATAAAATCAATCT	NA	False	NA	NA	False	ATTAAA	-1	NA	112360625	112229689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112234900_112238069_112238199_112360361
transcript_88754.known	chr20	-	1642	4	FSM	ENSG00000089063.15	ENST00000379299.6	1642	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	513.151266413932	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTTTAATGATTTTATGAT	-5101437	False	11605	-10	True	AATAAA	-29	NA	5113042	5099839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5100932_5106187_5106311_5109331_5109446_5112729
transcript_88757.known	chr20	-	1276	6	FSM	ENSG00000132646.11	ENST00000379143.10	1276	6	0	0	0	0	multi-exon	FALSE	canonical	3	1022	junction_5	115.475711731948	3419	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5108353	True	NA	-2	True	AATAAA	-23	NA	5119958	5114952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577
transcript_88758.known	chr20	-	1359	7	FSM	ENSG00000132646.11	ENST00000379160.3	1359	7	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_6	425.664741577479	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGGGCAGTGTCTTCATTTT	-5126321	True	NA	-2	True	AATAAA	-23	NA	5126626	5114952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5115363_5115448_5115573_5117469_5117665_5118609_5118678_5118768_5118867_5119577_5119915_5126499
transcript_88759.known	chr20	+	9076	13	FSM	ENSG00000101290.14	ENST00000460006.6	9076	13	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_2	20.2601140722905	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCATGTGTGGTTTTCGAT	5125541	True	NA	NA	False	AATAAA	-17	NA	5127007	5197887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5127150_5173522_5173660_5175182_5175280_5176647_5176746_5178816_5178957_5182386_5182446_5183060_5183144_5184857_5184946_5185757_5185827_5186686_5186840_5189066_5189187_5189734_5189839_5190101
transcript_88769.known	chr20	-	5434	20	FSM	ENSG00000125772.14	ENST00000379019.7	5434	20	0	0	0	0	multi-exon	TRUE	canonical	3	45	junction_3	13.0770145770855	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTAGTTTCCTAACTCAGA	-5609767	True	NA	-11	True	AATAAA	-16	NA	5611006	5544438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5547851_5557944_5558106_5558683_5558820_5559939_5560077_5561464_5561531_5565016_5565079_5566732_5566773_5567482_5567561_5570146_5570240_5573914_5573970_5575412_5575546_5575815_5575979_5578379_5578612_5580007_5580132_5584280_5584323_5586193_5586270_5593326_5593412_5598724_5598822_5604363_5604441_5610841
transcript_88773.known	chr20	+	627	4	FSM	ENSG00000171984.15	ENST00000442185.1	627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	15.369522511198	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGGACGGCTGCTCCGTCTT	5749649	True	NA	NA	False	NA	NA	NA	5750452	5863304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5750480_5756711_5756849_5772861_5773044_5863023
transcript_88777.known	chr20	+	585	3	FSM	ENSG00000171984.15	ENST00000378979.8	585	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	30.5	297	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTTGTATGAAGTATGCTG	5749589	True	NA	7	True	AATAAA	-18	NA	5750392	5773447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5750480_5772861_5773044_5773131
transcript_88779.known	chr20	+	1633	3	FSM	ENSG00000171984.15	ENST00000303142.11	1633	3	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	25.5	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTGGGGCCCTACTTTCTCT	5749597	True	NA	NA	False	AATAAA	-15	NA	5750400	5864395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5750480_5772861_5773044_5863023
transcript_8878.known	chr1	+	5864	6	FSM	ENSG00000143079.15	ENST00000271277.11	5864	6	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_1	18.1482781552411	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGAGTAGTGGTTCTCAAA	112390375	True	NA	9	True	AATAAA	-16	NA	112396213	112461164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112396273_112412193_112412318_112416156_112416265_112448941_112449173_112454448_112454557_112455930
transcript_88781.known	chr20	+	2462	5	FSM	ENSG00000089199.10	ENST00000378961.9	2462	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5.97390157267426	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCAAAAGCTTCATTGTTC	5911307	True	NA	NA	False	AATAAA	-13	NA	5911509	5925353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_5911683_5916325_5916373_5916825_5916920_5922334_5924101_5924971
transcript_88788.known	chr20	-	3025	11	FSM	ENSG00000089195.15	ENST00000473131.5	3025	11	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	93.0225779045066	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCGGGCACAGTGGCTCAT	-5946208	True	NA	NA	False	AATAAA	-7	NA	5950515	5937234	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943826_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_88789.known	chr20	-	2929	11	FSM	ENSG00000089195.15	ENST00000203001.7	2929	11	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_8	13.9298241194927	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAGTGGCTCATGCCTGTA	-5946226	True	NA	NA	False	AATAAA	-14	NA	5950533	5937227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5944804_5944915_5946405_5946534_5950277
transcript_88793.known	chr20	-	2239	10	FSM	ENSG00000089195.15	ENST00000453074.6	2239	10	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_8	97.6194425079121	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCTATGGTCTTATGGATA	-5946251	True	NA	-4	True	ATTAAA	-21	NA	5950558	5937832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_5938727_5941052_5941140_5941242_5941346_5941950_5942037_5942427_5942787_5943558_5943684_5943947_5944032_5944161_5944254_5946405_5946534_5950277
transcript_888.known	chr1	-	2260	7	FSM	ENSG00000160087.21	ENST00000349431.11	2260	7	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	53.1750254662218	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTCATGCTGCTTGTGTCTG	-1264091	True	NA	-4	True	AAAAAG	-28	NA	1273854	1253911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1255488_1256044_1256126_1256991_1257131_1257207_1257311_1263345_1263387_1267861_1267993_1273665
transcript_88803.nic	chr20	-	638	4	ISM	ENSG00000089195.15	ENST00000466974.5	2976	9	-107	6328	-26	-1486	5prime_fragment	FALSE	canonical	3	296	junction_1	13.6707311029399	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAGTAGTTTTTATTTTAAA	NA	False	NA	NA	False	ATTAAA	-16	NA	5950584	5944160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_5944254_5944804_5944915_5946405_5946534_5950277
transcript_88804.nic	chr20	-	1020	2	ISM	ENSG00000089195.15	ENST00000493972.1	778	6	-14	3090	5	-3090	5prime_fragment	FALSE	canonical	3	325	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTGAGAGTATCTTATTAA	-5946221	True	NA	NA	False	ATTAAA	-21	NA	5950528	5945764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_5946534_5950277
transcript_88806.nnic	chr20	+	1033	7	NNC	ENSG00000088766.12	novel	3859	6	NA	NA	-179	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	298.884407236123	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTAGGTTTCTTGATTAAT	NA	False	NA	12	True	AATAAA	-22	NA	6005913	6037393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_6006112_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_88807.known	chr20	+	3925	7	FSM	ENSG00000088766.12	ENST00000378863.9	3925	7	0	0	0	0	multi-exon	FALSE	canonical	3	595	junction_1	97.8309199020887	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTAGAAATATGGCTCTAAT	5998046	True	NA	NA	False	AATAAA	-22	NA	6006122	6040053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_6006553_6009774_6009913_6015360_6015491_6031284_6031371_6032011_6032081_6034463_6034556_6037073
transcript_88810.known	chr20	+	524	1	FSM	ENSG00000275632.1	ENST00000619201.1	524	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCACAGTACTGGTTTAATTT	6000407	False	NA	9	True	AATAAA	-14	NA	6000417	6000941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_6000400_6000900
transcript_88812.known	chr20	-	4637	15	FSM	ENSG00000101311.16	ENST00000217289.9	4637	15	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_14	8.77292914107288	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTACGGTCCTGTTGTGTCCT	-6123018	False	NA	-7	True	AGTAAA	-19	NA	6123030	6074844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_6077347_6079435_6079578_6084039_6084165_6085065_6085288_6087776_6087884_6088964_6089090_6094938_6094989_6096901_6097034_6097523_6097632_6107531_6107635_6110297_6110512_6112476_6112624_6115810_6116045_6119403_6119573_6122773
transcript_8882.nnic	chr1	+	682	4	NNC	ENSG00000143079.15	novel	5864	6	NA	NA	-14	9268	at_least_one_novel_splicesite	FALSE	canonical	3	4	junction_3	81.85759993224	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTAGCTTTTAAAATAAATTT	112390361	True	NA	3	True	AATAAA	-18	NA	112396199	112425555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_112396273_112412193_112412318_112416156_112416265_112425178
transcript_88826.nic	chr20	+	616	6	NIC	ENSG00000182621.18	novel	560	6	NA	NA	-95	-493	combination_of_known_junctions	FALSE	canonical	3	20	junction_5	11.0562199688682	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGCTATTGCTTTTTTGTT	NA	False	NA	4	True	AATAAA	-14	NA	8600619	8651518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_8600782_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8651412
transcript_8883.nic	chr1	+	328	3	ISM	ENSG00000143079.15	ENST00000271277.11	5864	6	-14	44877	-14	0	5prime_fragment	FALSE	canonical	3	165	junction_1	11.5	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTCATCATACATTGTGA	112390361	True	NA	NA	False	AAGAAA	-9	NA	112396199	112416287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_112396273_112412193_112412318_112416156
transcript_88831.nnic	chr20	-	589	3	Antisense	novelGene_ENSG00000182621.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTTTGTGGTAATTTGT	-8601095	True	NA	NA	False	AATAAA	-20	NA	8601126	8590513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_8590794_8594505_8594674_8600985
transcript_88834.nnic	chr20	-	383	2	Antisense	novelGene_ENSG00000182621.18_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTGAGTTTGTGGTAAT	-8601105	False	NA	NA	False	AATAAA	-16	NA	8601136	8590517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_8590794_8601029
transcript_88836.known	chr20	+	2996	26	FSM	ENSG00000182621.18	ENST00000626966.2	2996	26	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_14	9.3037626796904	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGTAAGCCCTCATTCCCAT	8600300	True	NA	3	True	AAGAAA	-9	NA	8600725	8788523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_8600782_8628293_8628432_8646101_8646182_8647899_8647954_8649373_8649450_8657183_8657285_8658537_8658705_8684931_8685079_8697625_8697784_8708669_8708753_8716263_8716349_8717670_8717849_8722353_8722422_8724655_8724753_8727308_8727394_8729049_8729175_8733237_8733393_8737027_8737193_8739260_8739361_8740343_8740449_8741463_8741574_8757045_8757179_8760406_8760461_8765138_8765359_8774538_8774720_8788448
transcript_88837.known	chr20	+	1810	6	FSM	ENSG00000125869.10	ENST00000246070.3	1810	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	1.32664991614216	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTGCTTTCTTGAAA	NA	False	NA	NA	False	AATAAA	-18	NA	9514589	9530524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_9514917_9515452_9515626_9515999_9516132_9516255_9516362_9518039_9518229_9529641
transcript_88838.nic	chr20	+	1390	4	ISM	ENSG00000125869.10	ENST00000246070.3	1810	6	1330	0	1330	0	3prime_fragment	FALSE	canonical	1	2	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCTGCTTTCTTGAAA	9515900	True	NA	NA	False	AATAAA	-18	NA	9515919	9530524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_9516132_9516255_9516362_9518039_9518229_9529641
transcript_8884.known	chr1	-	1780	15	FSM	ENSG00000007341.19	ENST00000490067.5	1780	15	0	0	0	0	multi-exon	TRUE	canonical	3	10	junction_14	29.0246200910291	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAATCACCAAATTTTTCTG	-112619116	False	NA	NA	False	NA	NA	NA	112619189	112525985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112526112_112541950_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616845_112618908
transcript_88840.nic	chr20	-	1723	5	ISM	ENSG00000101349.17	ENST00000378429.3	4780	11	84	42486	84	-42486	5prime_fragment	FALSE	canonical	0	0	junction_1	2.8613807855649	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTCTGATATATGAGTGA	-9838938	False	NA	NA	False	AATAAA	-20	NA	9838957	9579874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_9580931_9644124_9644340_9711285_9711436_9818679_9818786_9838761
transcript_88842.known	chr20	+	5303	10	FSM	ENSG00000132623.16	ENST00000378380.4	5303	10	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	11.6279781795121	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACGTGTTAATTGATTATGC	10033526	True	NA	8	True	AATACA	-20	NA	10035048	10058303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393_10044544_10045573_10045698_10049389_10050213_10051662_10051890_10053111_10053276_10054461_10054600_10055501
transcript_88849.nic	chr20	+	1550	4	ISM	ENSG00000132623.16	ENST00000378380.4	5303	10	-8	13243	-8	1844	5prime_fragment	FALSE	canonical	3	47	junction_3	11.8977121983832	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCATCTGAAATTTCTTTA	10033518	True	NA	NA	False	AATAAA	-25	NA	10035040	10045060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10035334_10038257_10038648_10043121_10043322_10044393
transcript_88850.nic	chr20	+	1132	3	ISM	ENSG00000132623.16	ENST00000378392.6	5429	11	-6	19331	-6	-4244	5prime_fragment	FALSE	canonical	3	7	junction_1	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	10033458	True	NA	NA	False	TATAAA	-25	NA	10034980	10038972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10035334_10035578_10035643_10038257
transcript_88851.nic	chr20	+	1066	2	ISM	ENSG00000132623.16	ENST00000488991.1	2805	11	-134	16855	-4	-4244	5prime_fragment	FALSE	canonical	3	76	junction_1	0	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGAAGTAGAGCATTTCTT	10033460	True	NA	NA	False	TATAAA	-25	NA	10034982	10038972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_10035334_10038257
transcript_88869.known	chr20	-	1669	7	FSM	ENSG00000125863.20	ENST00000652676.1	1669	7	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_4	565.636146299014	116	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTAATCCATGCTCTAG	-10420254	True	NA	NA	False	AATAAA	-5	NA	10434198	10404934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_10405688_10407615_10407727_10408627_10408804_10412529_10412701_10413795_10413932_10420527_10420759_10434107
transcript_88872.known	chr20	+	6056	8	FSM	ENSG00000149346.15	ENST00000334534.10	6056	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	6.17433793856409	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAATGTGTATCACTTCTGT	10433790	True	NA	1	True	AGTAAA	-15	NA	10435304	10628030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_10435454_10458175_10458232_10556230_10556321_10560699_10560821_10598674_10598753_10601730_10601820_10621313_10621415_10622658
transcript_88873.known	chr20	-	5940	26	FSM	ENSG00000101384.12	ENST00000254958.10	5940	26	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_12	14.6803814664334	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTGTCGAGGTGAATTG	-10672474	True	NA	-3	True	AATAAA	-20	NA	10673999	10637683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_10639956_10640782_10640934_10641112_10641245_10641459_10641694_10641782_10641893_10642487_10642602_10643777_10643864_10644356_10644385_10644862_10644980_10645142_10645257_10645355_10645470_10645970_10646085_10646938_10647104_10647959_10648111_10648548_10648723_10649060_10649108_10649521_10649636_10650246_10650361_10651580_10651695_10652130_10652251_10652467_10652599_10656397_10656459_10658467_10658723_10663962_10664015_10672700_10673007_10673449
transcript_88882.nnic	chr20	-	925	3	NNC	ENSG00000282478.1	novel	295	3	NA	NA	-26	80613	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAGCAGTGCATG	-11541600	True	NA	NA	False	NA	NA	NA	11541673	11455792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_11456426_11536330_11536436_11541486
transcript_88884.known	chr20	+	4686	5	FSM	ENSG00000132640.15	ENST00000254977.7	4686	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_3	25.9169346181218	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCTTTTGTCACACCCTTG	NA	False	NA	29	True	AATAAA	-28	NA	11890722	11926609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_11890955_11918333_11918602_11919085_11919177_11919717_11919837_11922633
transcript_88890.known	chr20	-	2342	14	FSM	ENSG00000089123.16	ENST00000337743.9	2342	14	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_8	9.62676249904493	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-13637152	True	NA	-4	True	AATAAA	-18	NA	13638932	13389393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13559007_13559115_13569506_13569587_13580896_13580982_13587249_13587371_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_88895.nnic	chr20	-	1967	10	NIC	ENSG00000089123.16	novel	2342	14	NA	NA	-18	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_6	26.9402631349023	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTAGAGAGCTATTATTTA	-13637170	True	NA	-4	True	AATAAA	-18	NA	13638950	13389393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_13390453_13417447_13417522_13435043_13435155_13483226_13483338_13528432_13528512_13534021_13534142_13623445_13623515_13625184_13625253_13629933_13630153_13638893
transcript_88903.known	chr20	-	426	4	FSM	ENSG00000089123.16	ENST00000434275.1	426	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	40.8275506109403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATGTCATTTTTCTGCTT	-13628231	False	NA	NA	False	ATTAAA	-17	NA	13630011	13614666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13614878_13623445_13623515_13625184_13625253_13629933
transcript_88904.known	chr20	-	3188	14	FSM	ENSG00000089048.15	ENST00000617257.2	3188	14	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_13	23.7763245575816	322	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTTGTATAGCACTGAT	-13777554	True	NA	-8	True	AATAAA	-18	NA	13784919	13714324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_88908.nic	chr20	-	2283	9	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-419	45414	-419	-45414	5prime_fragment	FALSE	canonical	3	295	junction_8	26.8418400077193	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAGGCAAAGAAAATGATA	-13785305	True	NA	88	True	AATACA	-35	NA	13785338	13759738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784879
transcript_88912.known	chr20	-	3216	14	FSM	ENSG00000089048.15	ENST00000202816.5	3216	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	93.3466530366038	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTGTATAGCACTGATTTA	-13777521	True	NA	-5	True	AATAAA	-21	NA	13784886	13714321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_13715168_13717367_13717515_13718907_13718985_13728377_13728466_13733720_13733843_13759691_13759854_13766776_13766925_13769906_13770022_13771330_13771484_13772514_13772616_13775156_13775271_13775872_13776271_13782503_13783184_13784821
transcript_88913.nic	chr20	-	1003	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-419	68315	-419	-68315	5prime_fragment	FALSE	canonical	3	295	junction_1	0	439	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAAAAAAACATTGTTCA	-13785305	True	NA	NA	False	AAGAAA	-1	NA	13785338	13782639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13783184_13784879
transcript_88914.nic	chr20	-	786	2	ISM	ENSG00000089048.15	ENST00000617257.2	3188	14	-419	68532	-419	-68532	5prime_fragment	FALSE	canonical	3	295	junction_1	0	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAGAAAAAAACCCAGACTA	-13785305	True	NA	NA	False	AATAAA	-1	NA	13785338	13782856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_13783184_13784879
transcript_88928.nic	chr20	+	1238	12	NIC	ENSG00000101247.18	novel	2409	12	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	43.9592222763381	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13784981	False	NA	14	True	AATAAA	-18	NA	13785004	13817228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_88934.known	chr20	+	2409	12	FSM	ENSG00000101247.18	ENST00000378081.9	2409	12	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_9	36.3938510835857	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGCGTTTTGTTTTTTGG	13784983	False	NA	NA	False	AGTAAA	-15	NA	13785006	13818421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13814417_13814516_13816462_13816547_13816874_13816958_13817117
transcript_88944.nic	chr20	+	1105	11	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_3	39.1821387879733	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783468	True	NA	14	True	AATAAA	-18	NA	13785039	13817228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_88950.known	chr20	+	5449	11	FSM	ENSG00000101247.18	ENST00000378106.10	5449	11	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_8	27.3468462532702	372	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCAACTGTGTTTTAGAGTAA	13783456	True	NA	NA	False	GATAAA	-15	NA	13785027	13821580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_88961.known	chr20	+	991	10	FSM	ENSG00000101247.18	ENST00000463598.1	991	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	51.4934971322941	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783478	True	NA	14	True	AATAAA	-18	NA	13785049	13817228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793159_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_88964.known	chr20	+	933	10	FSM	ENSG00000101247.18	ENST00000475968.5	933	10	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	43.5430821141545	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783516	True	NA	14	True	AATAAA	-18	NA	13785087	13817228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_88974.nic	chr20	+	1082	9	NIC	ENSG00000101247.18	novel	5449	11	NA	NA	4	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_8	57.1899248119807	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTGAAGGATCATTGTATT	13783460	True	NA	12	True	AATAAA	-24	NA	13785031	13803421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13793179_13793228_13794837_13794942_13798460_13798501_13801485_13801684_13801817_13801874_13803149
transcript_88975.nnic	chr20	+	939	9	NIC	ENSG00000101247.18	novel	991	10	NA	NA	6	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_3	46.0509229006325	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCGTCCAGAATTTTCATC	13783462	True	NA	14	True	AATAAA	-18	NA	13785033	13817228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_13785291_13787311_13787353_13788588_13788653_13798460_13798501_13801485_13801684_13808841_13808903_13816462_13816547_13816874_13816958_13817117
transcript_88991.known	chr20	+	1105	4	FSM	ENSG00000172264.18	ENST00000483997.5	1105	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	4.89897948556636	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGAAGTATGGTGATTTCT	13994915	True	NA	NA	False	AATAAA	-15	NA	13995501	14053679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_13995810_14002287_14002405_14051921_14052021_14053098
transcript_88996.known	chr20	-	617	2	FSM	ENSG00000125848.10	ENST00000462077.1	617	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGGAATTAAGCTACACAAA	-14337505	True	NA	NA	False	NA	NA	NA	14337614	14328921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_14329328_14337403
transcript_89003.known	chr20	+	1588	7	FSM	ENSG00000125870.11	ENST00000377943.9	1588	7	0	0	0	0	multi-exon	FALSE	canonical	3	831	junction_1	388.094239700732	3644	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGCTACTTCTTTGTAAT	16712173	True	NA	12	True	AATAAA	-17	NA	16729960	16741776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_89010.nic	chr20	+	546	4	ISM	ENSG00000125870.11	ENST00000377943.9	1588	7	-92	4438	-92	-4438	5prime_fragment	FALSE	canonical	3	831	junction_1	500.336109252792	737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAAAGAAAAAAGCCAAAAC	NA	False	NA	NA	False	AAGAAA	-9	NA	16729868	16737338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_16730065_16731667_16731767_16732163_16732337_16737260
transcript_89015.known	chr20	+	2411	7	FSM	ENSG00000125870.11	ENST00000246071.8	2411	7	0	0	0	0	multi-exon	FALSE	canonical	3	801	junction_1	398.899075233601	3597	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGATGAGTTTGGGCAATT	16712238	True	NA	NA	False	AATAAA	-23	NA	16730025	16742564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_16730165_16731667_16731767_16732163_16732337_16737260_16737402_16738851_16738903_16740324_16740414_16740845
transcript_89020.known	chr20	+	465	1	FSM	ENSG00000232333.1	ENST00000457576.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACTGTATGAGTTAATAAA	NA	False	NA	NA	False	NA	NA	NA	17516842	17517307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17516800_17517300
transcript_89026.known	chr20	+	1853	5	FSM	ENSG00000125868.16	ENST00000474024.5	1853	5	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	905.915283014919	714	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTCGTGTAATTTTCATG	17556679	True	NA	19	True	AATAAA	-19	NA	17570081	17608242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17570212_17591931_17592064_17600737_17601046_17604554_17604632_17607036
transcript_89037.known	chr20	+	795	5	FSM	ENSG00000125868.16	ENST00000449141.2	795	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	1084.7101859483	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCAGGGTCTCACTGAGG	17556687	True	NA	2	True	AATAAA	-13	NA	17570089	17607222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17570212_17600737_17601046_17604554_17604632_17605109_17605212_17607036
transcript_89039.known	chr20	-	3792	26	FSM	ENSG00000125844.17	ENST00000377807.6	3792	26	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	168.283332508006	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCGGTCTCGTCTGGTCTT	-17669964	True	NA	-2	True	ATTAAA	-21	NA	17682283	17613677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17614221_17614736_17614881_17615430_17615530_17615925_17616010_17616731_17616840_17618595_17618680_17619632_17619729_17620298_17620371_17620714_17620808_17621457_17621548_17621689_17621774_17621854_17621948_17624575_17624669_17625511_17625603_17627347_17627383_17627503_17627683_17629822_17629962_17633459_17633614_17635545_17635665_17636576_17636730_17641796_17641920_17642978_17643128_17658604_17658690_17659979_17660529_17679998_17680076_17682027
transcript_89042.known	chr20	-	1191	2	FSM	ENSG00000125844.17	ENST00000398782.2	1191	2	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	0	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTAGAAGGGGCCCAGAACC	-17669976	True	NA	NA	False	GGGGCT	-18	NA	17682295	17659605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17660529_17682027
transcript_89045.nnic	chr20	-	1183	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	36.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACATTGACCTACAGCT	-18058765	True	NA	-21	True	AATAAA	-34	NA	18059092	18024162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_89046.nnic	chr20	-	1084	3	NIC	ENSG00000125850.11	novel	1263	4	NA	NA	-42	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_2	36.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	-18058765	True	NA	-37	True	AATAAA	-18	NA	18059092	18024261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_18024953_18041533_18041724_18058889
transcript_89047.known	chr20	-	990	3	FSM	ENSG00000125850.11	ENST00000494030.1	990	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	40.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCTGTTTAAGCAAGGCAAG	NA	False	NA	-37	True	AATAAA	-18	NA	18059188	18024261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18024953_18041533_18041724_18059079
transcript_89056.known	chr20	-	2025	13	FSM	ENSG00000089006.17	ENST00000490175.5	2025	13	0	0	0	0	multi-exon	FALSE	canonical	3	122	junction_12	235.928823423977	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-17950358	True	NA	-22	True	AATAAA	-20	NA	17968800	17941596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968699
transcript_8908.known	chr1	-	990	4	FSM	ENSG00000007341.19	ENST00000467335.5	990	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	63.9079198708753	441	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACGCAGTTTGTGATATT	NA	False	NA	-3	True	AATAAA	-17	NA	112619774	112610458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112611004_112616812_112616896_112618908_112619140_112619643
transcript_89082.known	chr20	-	1087	1	FSM	ENSG00000089006.17	ENST00000606557.1	1087	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCTCCACTCTTTTTCA	-17968740	False	NA	-10	True	AATAAA	-33	NA	17968774	17967687	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17967700_17968800
transcript_89083.known	chr20	-	2288	14	FSM	ENSG00000089006.17	ENST00000377768.7	2288	14	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_13	152.050871275443	1849	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGCCTGTTTTCGTGGAAA	-17968946	False	NA	-22	True	AATAAA	-20	NA	17968980	17941596	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_17942408_17943109_17943196_17947485_17947646_17948889_17948977_17949063_17949104_17950131_17950208_17950290_17950397_17951499_17951596_17952586_17952711_17953995_17954118_17955364_17955476_17956932_17957038_17968374_17968458_17968699
transcript_89086.known	chr20	+	2231	5	FSM	ENSG00000125871.14	ENST00000377710.10	2231	5	0	0	0	0	multi-exon	FALSE	canonical	3	444	junction_2	45.2071620431984	2459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17968039	False	NA	NA	False	AATAAA	-22	NA	17969017	17991122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17969142_17969800_17970371_17975683_17975904_17988165_17988299_17989938
transcript_89087.known	chr20	+	1936	5	FSM	ENSG00000125871.14	ENST00000377709.1	1936	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	230.104867397454	2106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963895	True	NA	NA	False	AATAAA	-22	NA	17969072	17991122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17969142_17969800_17970131_17975683_17975904_17988165_17988299_17989938
transcript_89088.known	chr20	+	1781	3	FSM	ENSG00000125871.14	ENST00000377704.4	1781	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	242	2101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGGTTTTGTTTACTTT	17963937	False	NA	NA	False	AATAAA	-22	NA	17969114	17991122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_17969142_17969800_17970371_17989938
transcript_89093.known	chr20	+	1151	2	FSM	ENSG00000232838.4	ENST00000432901.4	1151	2	0	0	0	0	multi-exon	FALSE	canonical	3	517	junction_1	0	1821	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGTGTTACTTAAAGAAT	18131748	True	NA	12	True	AATAAA	-18	NA	18137862	18143169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18138052_18142207
transcript_89094.known	chr20	+	3927	11	FSM	ENSG00000149474.15	ENST00000377681.8	3927	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	107.371364897723	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCAGAGCGTCAATCTAGTC	18137783	False	NA	22	True	AATAAA	-24	NA	18137841	18188374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18138052_18142207_18142920_18145232_18145352_18150820_18150943_18159083_18159266_18161819_18162240_18162376_18162946_18181709_18181847_18183122_18183299_18184601_18184793_18187285
transcript_89099.known	chr20	+	2717	6	FSM	ENSG00000125846.16	ENST00000396026.7	2717	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	17.4997142833819	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18297984_18298063_18305007_18305179_18305680_18305808_18306297_18306394_18315071
transcript_8910.known	chr1	-	848	3	FSM	ENSG00000007341.19	ENST00000477332.5	848	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	7	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCAAAGAGCCTTTGTTTA	-112615843	True	NA	NA	False	AAGAAA	-31	NA	112619099	112607103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112607598_112610840_112611004_112618908
transcript_89101.known	chr20	+	2642	5	FSM	ENSG00000125846.16	ENST00000401790.5	2642	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	17.5712833908056	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18288270	True	NA	17	True	AATAAA	-23	NA	18288282	18316994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18305007_18305179_18305680_18305808_18306297_18306394_18315068
transcript_89104.known	chr20	+	2318	5	FSM	ENSG00000125846.16	ENST00000628216.2	2318	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	20.0249843945008	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTAACTGTGCCTGTGTCCC	18286941	True	NA	14	True	AATAAA	-20	NA	18288510	18316991	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18297984_18298063_18305680_18305808_18306297_18306394_18315068
transcript_89105.known	chr20	+	616	4	FSM	ENSG00000125846.16	ENST00000626025.2	616	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	15.5777619273972	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCTCTCGGAACGGCCTCAG	18286990	True	NA	NA	False	NA	NA	NA	18288559	18315376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18305667_18305808_18306270_18306394_18315068
transcript_89106.known	chr20	+	523	4	FSM	ENSG00000125846.16	ENST00000434018.5	523	4	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	19.9555060627944	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAGGTCCTGAGGGAGAAG	18286959	True	NA	NA	False	NA	NA	NA	18288528	18315279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18305667_18305808_18306297_18306394_18315068
transcript_89108.nnic	chr20	+	810	3	NNC	ENSG00000125846.16	novel	2660	5	NA	NA	-1	-20468	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	2	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCTATATTCTTGAGT	18286956	True	NA	4	True	AATAAA	-17	NA	18288525	18294638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_18288605_18289898_18290075_18294083
transcript_89109.nnic	chr20	+	685	3	NNC	ENSG00000125846.16	novel	2660	5	NA	NA	-1	-20468	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	2.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAATTCTATATTCTTGAGT	18286956	True	NA	4	True	AATAAA	-17	NA	18288525	18294638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_18288605_18289898_18290075_18294208
transcript_89110.known	chr20	+	1999	2	FSM	ENSG00000125846.16	ENST00000630056.1	1999	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGCCTGTGTCCCTCA	18286959	True	NA	17	True	AATAAA	-23	NA	18288528	18316994	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18288605_18315071
transcript_89125.known	chr20	-	3498	21	FSM	ENSG00000089091.16	ENST00000262547.9	3498	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	12.1926207191071	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTGACTCATTCCTTTC	NA	False	NA	0	True	AATAAA	-19	NA	18467185	18383368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18396471_18396547_18398522_18398627_18412645_18412836_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465378_18466995
transcript_89126.known	chr20	-	3145	22	FSM	ENSG00000089091.16	ENST00000609267.5	3145	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	14.224631315237	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAGAATATGT	NA	False	NA	NA	False	NA	NA	NA	18467281	18384076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18384565_18385015_18385091_18389700_18389829_18390378_18390460_18393710_18393812_18394253_18394351_18394674_18394859_18396471_18396547_18398522_18398627_18412645_18412836_18414347_18414513_18415326_18415450_18427066_18427160_18433651_18433766_18443346_18443465_18448983_18449070_18452614_18452683_18453730_18453828_18455246_18455362_18460152_18460307_18465249_18465453_18466995
transcript_89127.nic	chr20	-	830	3	ISM	ENSG00000089091.16	ENST00000480488.2	837	6	-84	4630	-84	0	5prime_fragment	FALSE	non_canonical	0	0	junction_2	19.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGTCTCAGAGTCTGCTT	-18412813	False	NA	0	True	AATAAA	-16	NA	18413306	18398343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_18398627_18412645_18412854_18412967
transcript_89129.nnic	chr20	-	782	3	NNC	ENSG00000089091.16	novel	3295	20	NA	NA	-37	-46582	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCCTTTATGCACATTATTA	-18466503	True	NA	NA	False	AATAAA	-15	NA	18467067	18459301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18459884_18465249_18465378_18466995
transcript_89133.known	chr20	+	2156	9	FSM	ENSG00000132664.12	ENST00000377603.5	2156	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_7	8.78119439484174	285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCAGTCTATGGTATTCTGTT	18465634	True	NA	NA	False	AATAAA	-21	NA	18467389	18484646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_89134.known	chr20	+	2257	9	FSM	ENSG00000132664.12	ENST00000462997.5	2257	9	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	37.4631068519417	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	18465633	True	NA	NA	False	AATAAA	-18	NA	18467388	18484643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18467672_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18481618_18481811_18483480
transcript_89135.nic	chr20	+	1966	8	NIC	ENSG00000132664.12	novel	2257	9	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_7	39.0410563590773	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACCAGTCTATGGTATTCT	18465629	True	NA	NA	False	AATAAA	-18	NA	18467384	18484643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_18467569_18468943_18469062_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18483480
transcript_8914.known	chr1	-	582	3	FSM	ENSG00000007341.19	ENST00000492274.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	69	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCCCTCAGGGATGTGATGA	NA	False	NA	NA	False	NA	NA	NA	112619796	112610657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112611004_112616812_112616896_112619643
transcript_89140.known	chr20	+	705	7	FSM	ENSG00000132664.12	ENST00000489753.1	705	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	53.974273707223	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGCTATGAACTTTATTGACA	18465692	True	NA	NA	False	AATAGA	-2	NA	18467447	18483563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18467569_18472841_18472910_18473390_18473459_18475074_18475188_18480037_18480182_18480401_18480510_18483480
transcript_89145.known	chr20	+	426	3	FSM	ENSG00000132664.12	ENST00000475192.1	426	3	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_2	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCCCTGCCTCCTATGATA	18465675	True	NA	NA	False	AATAAA	-36	NA	18467430	18473011	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18467569_18468943_18469062_18472841
transcript_89146.nnic	chr20	+	1044	3	Fusion	ENSG00000225419.1_ENSG00000214612.3	novel	478	2	NA	NA	-50	55	multi-exon	TRUE	non_canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGAACTAGGTTTTACAT	NA	False	NA	NA	False	AATACA	-29	NA	18485214	18505121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_18485627_18485936_18486045_18504597
transcript_89147.nnic	chr20	+	1169	3	Fusion	ENSG00000225419.1_ENSG00000214612.3	novel	478	2	NA	NA	-50	55	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGAACTAGGTTTTACAT	NA	False	NA	NA	False	AATACA	-29	NA	18485214	18505121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_18485627_18485936_18486108_18504535
transcript_89148.nnic	chr20	+	1181	3	Fusion	ENSG00000225419.1_ENSG00000214612.3	novel	478	2	NA	NA	-50	55	multi-exon	FALSE	non_canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAGGAACTAGGTTTTACAT	NA	False	NA	NA	False	AATACA	-29	NA	18485214	18505121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_18485627_18485936_18486120_18504535
transcript_8915.known	chr1	-	752	2	FSM	ENSG00000007341.19	ENST00000470683.1	752	2	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	-112615855	True	NA	1	True	AATAAA	-21	NA	112619111	112610454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112611004_112618908
transcript_89150.nnic	chr20	-	2926	6	NNC	ENSG00000089050.16	novel	3843	5	NA	NA	-29	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	34.9662694607246	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-18495866	True	NA	NA	False	ATTAAA	-20	NA	18497254	18486539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_18487692_18488637_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_89156.known	chr20	-	3843	5	FSM	ENSG00000089050.16	ENST00000337227.9	3843	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	12.2678441463853	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGAAGTTTCTCTTTATT	-18495837	True	NA	NA	False	ATTAAA	-20	NA	18497225	18486539	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18495837_18495881_18497068
transcript_89159.known	chr20	-	830	4	FSM	ENSG00000089050.16	ENST00000491835.1	830	4	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	38.2186690854963	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGTAAAATTAAATAGGT	-18495786	True	NA	NA	False	NA	NA	NA	18497174	18489458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_18489991_18490394_18490481_18493957_18494064_18497068
transcript_8916.known	chr1	-	1866	14	FSM	ENSG00000007341.19	ENST00000343210.11	1866	14	0	0	0	0	multi-exon	TRUE	canonical	3	35	junction_1	32.436008918426	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTGATTTGAGCTAC	-112619116	False	NA	-14	True	CATAAA	-16	NA	112619189	112541789	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112542091_112550600_112550694_112555867_112556019_112576985_112577089_112578344_112578418_112581991_112582107_112582374_112582473_112583971_112584127_112591524_112591604_112597970_112598087_112600793_112600849_112610840_112611004_112616812_112616896_112618908
transcript_89162.known	chr20	+	434	1	FSM	ENSG00000214612.3	ENST00000415286.1	434	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1062	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACAAACCATGCTGGGT	18504621	False	NA	NA	False	NA	NA	NA	18504632	18505066	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18504600_18505100
transcript_89166.known	chr20	+	3464	20	FSM	ENSG00000101310.17	ENST00000336714.8	3464	20	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	97.0557426148254	133	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGTATTTTTATTTTTA	18507509	False	NA	NA	False	AATATA	-19	NA	18507519	18561415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18507991_18510821_18511057_18512224_18512283_18515649_18515737_18524432_18524670_18524934_18525021_18525787_18525933_18526372_18526532_18527495_18527612_18530679_18530804_18532663_18532745_18535652_18535743_18542295_18542403_18543018_18543173_18545955_18546034_18548608_18548771_18551088_18551176_18554234_18554391_18555107_18555174_18560650
transcript_8917.known	chr1	-	685	4	FSM	ENSG00000007341.19	ENST00000498383.5	685	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	62.9655990733565	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGCAGTTTGTGATATTTTGT	-112615855	True	NA	1	True	AATAAA	-21	NA	112619111	112610454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112610691_112610840_112611004_112616812_112616896_112618908
transcript_89177.known	chr20	+	695	5	FSM	ENSG00000284776.1	ENST00000618693.4	695	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	299.674406648282	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGGGCGACGTGTCCTC	18557896	True	NA	NA	False	AAGAAA	-38	NA	18567452	18744216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18567597_18593730_18593822_18596005_18596242_18628126_18628234_18744099
transcript_89179.known	chr20	+	490	2	FSM	ENSG00000232388.5	ENST00000411646.2	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	17328	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATCTGCGTTTTCTTTTTT	18557875	True	NA	12	True	AATAAA	-18	NA	18567431	18569560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18567597_18569235
transcript_8918.known	chr1	+	2358	10	FSM	ENSG00000116489.13	ENST00000263168.4	2358	10	0	0	0	0	multi-exon	FALSE	canonical	3	958	junction_9	62.5503254178309	555	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGAGTCTCTCCTTTT	112618660	True	NA	10	True	AATATA	-18	NA	112619831	112671616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112619884_112647209_112647274_112649417_112649470_112653597_112653662_112654464_112654672_112659021_112659102_112659700_112659780_112667073_112667146_112669542_112669606_112669991
transcript_89182.known	chr20	+	1539	1	FSM	ENSG00000273148.1	ENST00000609087.1	1539	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTGGGCCTTTGTTTA	18794357	False	NA	13	True	AATAAA	-25	NA	18794528	18796067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_18794500_18796100
transcript_89188.known	chr20	+	1222	7	FSM	ENSG00000173418.12	ENST00000484480.5	1222	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	316.536332827687	199	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010104	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20018361_20018518_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_89189.known	chr20	+	1000	5	FSM	ENSG00000173418.12	ENST00000480550.1	1000	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	299.897795090261	238	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010153	True	NA	32	True	TATAAA	-35	NA	20017358	20033629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20025668_20025768_20026783_20026920_20032507_20032654_20033101
transcript_8919.known	chr1	+	739	3	FSM	ENSG00000116489.13	ENST00000485542.5	739	3	0	0	0	0	multi-exon	FALSE	canonical	3	1049	junction_1	65.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATAATAAAATCTAAACTTG	112618633	True	NA	NA	False	NA	NA	NA	112619804	112650013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112619884_112647209_112647274_112649417
transcript_89193.known	chr20	+	1040	6	FSM	ENSG00000173418.12	ENST00000334982.9	1040	6	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_2	62.6469472520409	3012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAAACTAAATCAGATTGT	20010156	True	NA	58	True	AATACA	-43	NA	20017361	20033655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20032507_20032654_20033101
transcript_89194.known	chr20	+	920	5	FSM	ENSG00000173418.12	ENST00000310450.8	920	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	279.930683384298	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCTGAAGTTTGTTAG	20010104	True	NA	32	True	TATAAA	-35	NA	20017309	20033629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_20017450_20022455_20022481_20025676_20025768_20026783_20026920_20033101
transcript_89195.known	chr20	-	4015	14	FSM	ENSG00000101343.15	ENST00000536226.2	4015	14	0	0	0	0	multi-exon	FALSE	canonical	3	215	junction_8	27.3225311795809	120	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAATTTCTTGTGGGTTTTTC	-20047606	True	NA	-14	True	AGTAAA	-24	NA	20052466	20034367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_20036363_20037322_20037572_20038348_20038451_20039608_20039849_20040685_20040767_20041565_20041626_20042324_20042517_20043491_20043663_20045307_20045487_20047764_20047932_20048342_20048502_20049339_20049432_20050469_20050623_20052291
transcript_8920.known	chr1	+	3552	21	FSM	ENSG00000155363.19	ENST00000369645.6	3380	21	-172	0	66	0	multi-exon	FALSE	canonical	3	147	junction_1	76.5364455668017	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTGATAATGTCTCCTCT	112673931	True	NA	24	True	AAGAAA	-33	NA	112674486	112700739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112674730_112674847_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_89202.known	chr20	-	9545	40	FSM	ENSG00000188559.16	ENST00000202677.12	9545	40	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_31	10.1494421943933	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATTGTGTGAAAGCATA	-20710986	True	NA	1	True	AATAAA	-25	NA	20712644	20389529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_20393254_20396694_20396735_20412026_20412149_20472828_20472957_20495116_20495276_20503350_20503507_20505410_20505535_20511253_20511326_20512512_20513285_20520916_20521101_20524405_20524544_20524829_20524899_20526251_20526363_20531686_20531796_20535744_20535804_20536655_20536785_20546703_20546833_20571457_20571614_20571847_20571947_20572874_20573069_20583049_20583227_20584864_20584956_20589267_20589366_20591176_20591315_20601681_20601847_20605174_20605413_20611314_20611427_20616042_20616192_20619276_20619415_20620462_20620631_20629362_20629591_20635417_20635618_20637362_20637502_20639784_20639901_20640700_20640879_20643505_20643550_20653529_20653588_20676235_20676289_20680690_20680802_20712374
transcript_89205.known	chr20	-	1164	4	FSM	ENSG00000225127.4	ENST00000668281.1	1164	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.471404520791032	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTACTCTTTTGCGTCTGAGT	-21102253	False	130	NA	False	ATTAAA	-12	NA	21102383	21085578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21085889_21087943_21088031_21093196_21093853_21102272
transcript_89206.nic	chr20	-	637	4	NIC	ENSG00000225127.4	novel	1139	4	NA	NA	-30	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	3.77123616632825	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTTGCGTCTGAGTTTT	-21106262	True	NA	NA	False	ATTAAA	-15	NA	21106392	21085575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_21085889_21087943_21088031_21093737_21093853_21106270
transcript_89208.known	chr20	-	1155	2	FSM	ENSG00000225127.4	ENST00000668193.1	1155	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	-21102253	False	130	NA	False	AATAAA	-16	NA	21102383	21092808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21093853_21102272
transcript_89209.known	chr20	-	1288	2	FSM	ENSG00000225127.4	ENST00000420705.2	1288	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	NA	False	NA	NA	False	AATAAA	-16	NA	21106514	21092808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21093853_21106270
transcript_8921.known	chr1	+	3383	20	FSM	ENSG00000155363.19	ENST00000357443.2	3383	20	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_1	58.2238968179288	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTGAAAACAAAATCTTGTTC	112671994	True	NA	-5	True	AAGAAA	-4	NA	112674744	112700710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112675050_112688934_112689139_112689414_112689651_112689839_112690099_112691664_112691800_112692760_112692930_112694017_112694173_112694452_112694630_112694748_112694897_112695415_112695575_112696147_112696252_112696436_112696535_112696629_112696847_112697993_112698112_112698286_112698479_112698714_112698790_112699684_112699811_112699893_112699983_112700218_112700341_112700415
transcript_89210.known	chr20	-	1228	2	FSM	ENSG00000225127.4	ENST00000671648.1	1228	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTCTTTTTTGGGGGTTAGT	-21101437	False	NA	NA	False	AATAAA	-16	NA	21101567	21092808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21093853_21101383
transcript_89213.nnic	chr20	-	901	2	FSM	ENSG00000225127.4	ENST00000685825.1	895	2	-13	7	-13	-7	multi-exon	FALSE	canonical	2	4	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTGGTTCTCCGTTCTT	-21106245	True	NA	NA	False	TATAAA	-12	NA	21106375	21102677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21103474_21106270
transcript_89214.known	chr20	+	475	1	FSM	ENSG00000235065.1	ENST00000421023.1	475	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	84	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGGCAGATTCTATTTTTA	NA	False	NA	NA	False	NA	NA	NA	21114722	21115197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21114700_21115200
transcript_8922.known	chr1	+	610	3	FSM	ENSG00000155363.19	ENST00000465579.1	610	3	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_2	23.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACCAACAGGCTGGACCCCA	112671986	True	NA	NA	False	NA	NA	NA	112674736	112688483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112675050_112686965_112687107_112688327
transcript_89222.nic	chr20	+	2163	13	NIC	ENSG00000088970.16	novel	2102	13	NA	NA	-16	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_7	32.5451609306207	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21125966	21246622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_89223.known	chr20	+	2102	13	FSM	ENSG00000088970.16	ENST00000619189.5	2102	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_3	25.5259943761039	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21120980	True	NA	NA	False	AATAAA	-20	NA	21126081	21246622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_89229.known	chr20	+	2014	12	FSM	ENSG00000088970.16	ENST00000620891.4	2014	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	48.2347907772213	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21120905	True	NA	NA	False	AATAAA	-20	NA	21126006	21246622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21145564_21145655_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_89233.known	chr20	+	1875	11	FSM	ENSG00000088970.16	ENST00000616848.4	1875	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	49.1456000065113	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATCCTGTGTTAATATGT	21120950	True	NA	NA	False	AATAAA	-16	NA	21126051	21246618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21161870_21162508_21162849_21163160_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_89247.nnic	chr20	+	774	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-28026	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	57.1057022064329	196	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21190122	True	NA	NA	False	AATAAA	-20	NA	21190432	21246622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_21190545_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_8925.known	chr1	-	1042	7	FSM	ENSG00000155366.17	ENST00000468093.5	1042	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	255.737332693788	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGAGTTGTTTTCGGCAG	-112699968	True	NA	-114	True	NA	NA	NA	112707102	112701209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703383_112703458_112703643_112703807_112705099_112705124_112707077
transcript_89251.nnic	chr20	+	828	8	NNC	ENSG00000088970.16	novel	1971	11	NA	NA	-28026	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	51.1572206486024	277	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	21190122	True	NA	NA	False	AATAAA	-20	NA	21190432	21246622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_21190545_21205490_21205585_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_89273.known	chr20	+	558	5	FSM	ENSG00000088970.16	ENST00000620553.2	558	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	67.5037036020988	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAATAAACTAAATTGGTAAC	21120958	True	NA	NA	False	ACTAAA	-33	NA	21126059	21145655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21126205_21132096_21132160_21136389_21136553_21144096_21144193_21145564
transcript_89280.nic	chr20	+	463	3	ISM	ENSG00000088970.16	ENST00000620553.2	558	5	-93	9104	-16	102	5prime_fragment	FALSE	canonical	3	135	junction_2	1	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTGACTTCCTGTTTTTTAC	NA	False	NA	14	True	AATACA	-21	NA	21125966	21136551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_21126205_21132096_21132160_21136389
transcript_89282.known	chr20	+	1397	9	FSM	ENSG00000088970.16	ENST00000621366.1	1397	9	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	36.8186009375696	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTGTGTTAATATGTGATG	NA	False	NA	NA	False	AATAAA	-20	NA	21162082	21246622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21162508_21162849_21163160_21205490_21205531_21214534_21214701_21215582_21215649_21229010_21229116_21232733_21232831_21244244_21244289_21246478
transcript_89283.known	chr20	-	391	1	FSM	ENSG00000214535.3	ENST00000457423.1	391	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2596	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGATGTAATACATATATTTA	NA	False	NA	NA	False	AAAACA	-35	NA	21166596	21166205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_21166200_21166600
transcript_89285.known	chr20	+	3408	30	FSM	ENSG00000088930.8	ENST00000377191.5	3408	30	0	0	0	0	multi-exon	TRUE	canonical	3	807	junction_5	69.6090150926163	822	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284189	True	NA	25	True	AATAAA	-19	NA	21303330	21389825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043_21339089_21340720_21340853_21344089_21344209_21346414_21346551_21348145_21348254_21348340_21348431_21349388_21349462_21354788_21354873_21356079_21356178_21356585_21356666_21357735_21357793_21365420_21365490_21365572_21365705_21368462_21368591_21381993_21382058_21386867_21387007_21389272
transcript_8929.known	chr1	-	888	6	FSM	ENSG00000155366.17	ENST00000369637.5	888	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_5	236.355156491243	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCCCCCTTTGACCTTCCC	-112699991	True	NA	NA	False	NA	NA	NA	112707125	112701312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705124_112707077
transcript_8930.known	chr1	-	1026	6	FSM	ENSG00000155366.17	ENST00000369632.6	1026	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_5	236.029659153251	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGCCCCCTCCCTTCACAG	-112699945	True	NA	NA	False	GGGGCT	-35	NA	112707079	112701519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112706731
transcript_89303.nic	chr20	+	1383	14	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-47	50747	-47	-50747	5prime_fragment	FALSE	canonical	3	807	junction_5	64.4968693336828	514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAATGAAGGTGAGTTTTA	21284142	True	NA	29	True	AAAAAG	-4	NA	21303283	21339078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077_21334186_21339043
transcript_89306.nic	chr20	+	1349	13	ISM	ENSG00000088930.8	ENST00000377191.5	3408	30	-47	55639	-47	-55639	5prime_fragment	FALSE	canonical	3	807	junction_5	57.0041421496914	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAAGTGTTTCTATTGCAGT	21284142	True	NA	8	True	AAAAAG	-17	NA	21303283	21334186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_21303474_21326278_21326407_21326489_21326602_21328558_21328671_21330480_21330540_21330615_21330706_21331560_21331634_21331767_21331819_21332282_21332441_21333543_21333619_21333703_21333838_21333936_21333995_21334077
transcript_89328.nnic	chr20	+	928	4	NIC	ENSG00000088930.8	novel	3408	30	NA	NA	-29	0	combination_of_known_splicesites	FALSE	canonical	2	6	junction_1	476.110864773695	602	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTTGTGTTGTTATTTTG	21284160	True	NA	25	True	AATAAA	-19	NA	21303301	21389825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_21303474_21381993_21382058_21386867_21387007_21389272
transcript_89331.nnic	chr20	+	765	4	NNC	ENSG00000238034.2	novel	707	3	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.471404520791032	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTAACTGGCCATCTT	21937715	True	NA	NA	False	ATTAAA	-14	NA	21937759	21970783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_21937898_21947648_21947703_21965005_21965066_21970270
transcript_89334.nnic	chr20	+	634	3	FSM	ENSG00000238034.2	ENST00000686630.1	707	3	-47	120	-47	-120	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGACATTTGGGCTTCACTTT	21937689	False	NA	NA	False	AATAAA	-23	NA	21937710	21970663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21937898_21947648_21947703_21970270
transcript_89335.nnic	chr20	+	740	3	FSM	ENSG00000238034.2	ENST00000686630.1	707	3	-33	0	-33	0	multi-exon	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTAACTGGCCATCTT	21937703	False	NA	NA	False	ATTAAA	-14	NA	21937724	21970783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21937898_21947648_21947703_21970270
transcript_89338.known	chr20	+	569	2	FSM	ENSG00000238034.2	ENST00000438222.1	569	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGTAACTGGCCATCTT	21947602	False	NA	NA	False	ATTAAA	-14	NA	21947646	21970783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_21947703_21970270
transcript_89339.known	chr20	+	693	4	FSM	ENSG00000234435.3	ENST00000449427.3	693	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0.816496580927726	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGGCCTGTGGTATTTTGT	22054054	True	NA	NA	False	AATAAA	-16	NA	22054073	22074654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_22054285_22068438_22068689_22073387_22073467_22074501
transcript_89343.known	chr20	+	1062	2	FSM	ENSG00000132661.4	ENST00000254998.3	1062	2	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_1	0	159	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTGTCTGATGTGTTTGA	23347083	True	NA	13	True	AATACA	-14	NA	23350790	23354771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_23351062_23353980
transcript_89345.known	chr20	-	514	3	FSM	ENSG00000232645.6	ENST00000687401.1	692	3	170	8	103	0	multi-exon	FALSE	canonical	2	11	junction_1	3.5	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTTCATCTGCCTTATAA	-23357925	True	NA	NA	False	AATAAA	-16	NA	23358005	23356593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23356970_23357050_23357138_23357954
transcript_89346.known	chr20	-	505	2	FSM	ENSG00000232645.6	ENST00000452395.2	764	2	56	203	5	-201	multi-exon	FALSE	canonical	3	18	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGTTAAAGCGAGGGAGAGA	-23358036	True	NA	NA	False	AAGAAA	-39	NA	23358116	23356794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23357138_23357954
transcript_89347.known	chr20	+	4834	6	FSM	ENSG00000125812.16	ENST00000338121.10	4834	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	8.97552226892675	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGATGGGTACTTGTCAAT	23360608	True	NA	NA	False	AATAAA	-34	NA	23362181	23373062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_23362238_23364362_23365748_23367002_23367098_23368761_23368930_23369583_23369742_23370090
transcript_8935.known	chr1	-	1117	6	FSM	ENSG00000155366.17	ENST00000339083.12	1117	6	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_5	212.039053006752	2324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTGTGTGGCAGCTTTCGGT	-112699993	True	NA	-35	True	AATAAA	-16	NA	112707127	112701130	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112701714_112702562_112702694_112702998_112703120_112703643_112703807_112705099_112705169_112707077
transcript_89350.known	chr20	-	3837	11	FSM	ENSG00000125814.17	ENST00000377026.4	3837	11	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_8	31.1738672608966	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATGCTTGTTTTATTTTAA	-23419445	True	NA	-2	True	AATAAA	-19	NA	23421488	23374521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23397071_23397189_23402992_23403073_23421304
transcript_89354.known	chr20	-	3824	10	FSM	ENSG00000125814.17	ENST00000398425.7	3824	10	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_7	28.0321684700953	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	NA	False	NA	1	True	AATAAA	-22	NA	23421519	23374518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23397071_23397189_23402992_23403073_23421304
transcript_89357.known	chr20	-	3754	10	FSM	ENSG00000125814.17	ENST00000432543.6	3754	10	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_8	36.0154287925482	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGTTTTATTTTAACCT	NA	False	NA	1	True	AATAAA	-22	NA	23421519	23374518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23377487_23379444_23379496_23379866_23379936_23381212_23381318_23389945_23390031_23390208_23390265_23394921_23395000_23395138_23395186_23402992_23403073_23421304
transcript_8936.known	chr1	-	420	3	FSM	ENSG00000155366.17	ENST00000478447.1	420	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_2	70	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAAACCTGGATATACTTT	-112699980	True	NA	NA	False	AGTAAA	-26	NA	112707114	112703492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112703807_112705099_112705169_112707077
transcript_89360.known	chr20	-	576	3	FSM	ENSG00000125831.10	ENST00000377009.8	576	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTCTTAAGATCGTGATTC	NA	False	NA	NA	False	AATAAA	-15	NA	23452876	23450411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23450590_23451815_23451921_23452583
transcript_89361.known	chr20	-	461	2	FSM	ENSG00000125831.10	ENST00000377007.3	461	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCGTGATTCCACTTTTTT	NA	False	NA	NA	False	AATAAA	-24	NA	23452857	23450402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23450590_23452583
transcript_89362.nnic	chr20	+	836	3	NNC	ENSG00000204663.9	novel	1157	4	NA	NA	12767	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCTGAGTACAAATTACTTT	NA	False	NA	NA	False	AATAAA	-28	NA	23533642	23542018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_23534023_23534197_23534309_23541673
transcript_89363.nnic	chr20	-	709	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-102	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	248.693028093315	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23636520	True	NA	-8	True	AATAAA	-15	NA	23638057	23633656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637791_23637976
transcript_89365.nnic	chr20	-	756	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-54	0	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_3	248.693028093315	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23636472	True	NA	-8	True	AATAAA	-15	NA	23638009	23633656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637792_23637882
transcript_89366.nnic	chr20	-	704	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-96	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	248.693028093315	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23636514	True	NA	-8	True	AATAAA	-15	NA	23638051	23633656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637798_23637982
transcript_89367.nnic	chr20	-	777	4	NNC	ENSG00000101439.9	novel	832	4	NA	NA	-155	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	248.693028093315	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23638063	False	NA	-8	True	AATAAA	-15	NA	23638110	23633656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_23634000_23635253_23635368_23637619_23637806_23637976
transcript_89368.known	chr20	-	793	3	FSM	ENSG00000101439.9	ENST00000376925.8	793	3	0	0	0	0	multi-exon	FALSE	canonical	3	513	junction_2	14	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23636418	True	NA	-8	True	AATAAA	-15	NA	23637955	23633656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23634000_23635253_23635368_23637619
transcript_89369.known	chr20	-	655	4	FSM	ENSG00000170373.9	ENST00000398402.1	655	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.0369800568452	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGGAGGCCTCCCCATGT	NA	False	NA	NA	False	NA	NA	NA	23751268	23747730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23747900_23749015_23749130_23750638_23750899_23751156
transcript_8937.nnic	chr1	+	1032	3	NNC	ENSG00000184599.14	novel	1282	5	NA	NA	2484	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	1	9	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTGGCACAGGTATGGGC	112722857	False	NA	NA	False	AATAAA	-19	NA	112722902	112727235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_112723166_112723975_112724138_112726628
transcript_89370.known	chr20	-	749	3	FSM	ENSG00000170373.9	ENST00000304749.7	749	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	3	810	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	-23750176	True	NA	0	True	ATTAAA	-14	NA	23750935	23747561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23747900_23749015_23749130_23750638
transcript_89371.known	chr20	-	755	3	FSM	ENSG00000170367.5	ENST00000304710.5	755	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTCTGAGTTCTTGGCTG	NA	False	NA	NA	False	ATTAAA	-14	NA	23879748	23875933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_23876272_23877504_23877619_23879445
transcript_89374.known	chr20	+	2092	4	FSM	ENSG00000101463.6	ENST00000376862.4	2092	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	8.52447456836295	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	24469572	True	NA	45	True	NA	NA	NA	24469628	24666616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_24469754_24543019_24543578_24584855_24584994_24665345
transcript_89376.nnic	chr20	+	2076	4	NNC	ENSG00000101463.6	novel	417	2	NA	NA	188	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_1	7.11805216802087	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTGTCGTTGGGTTTCAT	24469437	True	NA	45	True	NA	NA	NA	24469816	24666616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_24469926_24543019_24543578_24584855_24584994_24665345
transcript_89383.known	chr20	-	2117	10	FSM	ENSG00000101474.12	ENST00000451442.5	2117	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_2	271.779367670465	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	-24983082	False	NA	-1	True	AATAAA	-34	NA	24992642	24962924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_24964023_24964374_24964399_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_89388.known	chr20	-	2202	9	FSM	ENSG00000101474.12	ENST00000217456.3	2202	9	0	0	0	0	multi-exon	FALSE	canonical	3	582	junction_1	48.048803314963	1227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGATGGTGTGGCCTGGGA	-24983191	True	NA	-1	True	AATAAA	-34	NA	24992751	24962924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_24964023_24968891_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_89394.nnic	chr20	-	2030	8	NIC	ENSG00000101474.12	novel	2202	9	NA	NA	-40	-19	combination_of_known_splicesites	FALSE	canonical	3	51	junction_1	222.951536785693	432	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGCTGATTAACCTTTT	-24983231	False	NA	-20	True	AATAAA	-15	NA	24992791	24962943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_24964023_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_89396.nic	chr20	-	1148	8	ISM	ENSG00000101474.12	ENST00000217456.3	2202	9	-40	5963	-40	-5963	5prime_fragment	FALSE	canonical	3	611	junction_1	40.4822964582126	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTGAAAACTGTTATTCCA	-24983231	False	NA	-12	True	ATTAAA	-20	NA	24992791	24968887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_24969085_24969525_24969661_24970196_24970372_24971459_24971577_24973644_24973738_24978766_24978883_24983902_24984020_24992593
transcript_89402.known	chr20	-	558	2	FSM	ENSG00000100987.15	ENST00000557285.1	558	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACGGCACTGGAGGGGCCC	NA	False	NA	NA	False	AAGAAA	-38	NA	25077999	25076307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25076551_25077684
transcript_89409.known	chr20	+	4104	15	FSM	ENSG00000197586.13	ENST00000376652.9	4104	15	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_2	71.3073614426895	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACGTGTCCAAAAATTTAT	25190643	True	NA	NA	False	NA	NA	NA	25195711	25228075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25195868_25206521_25206591_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_8941.known	chr1	-	767	4	FSM	ENSG00000215866.9	ENST00000433505.5	767	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	454.878738420105	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTTTGGTGGTCTCTTCA	-112849718	True	NA	0	True	AATAAA	-23	NA	112849815	112820169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112820539_112823652_112823755_112825512_112825673_112849679
transcript_89410.known	chr20	+	2766	15	FSM	ENSG00000197586.13	ENST00000360031.6	2766	15	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_2	68.5488430066549	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190632	True	NA	28	True	AATAAA	-29	NA	25195700	25226729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25195868_25206521_25206591_25207078_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_89412.known	chr20	+	2708	14	FSM	ENSG00000197586.13	ENST00000354989.9	2708	14	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_1	68.2292515658113	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190624	True	NA	28	True	AATAAA	-29	NA	25195692	25226729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_89418.nic	chr20	+	2606	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	78	junction_9	84.9730349385419	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190624	True	NA	28	True	AATAAA	-29	NA	25195692	25226729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25195868_25207075_25207398_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_89421.nic	chr20	+	2386	13	NIC	ENSG00000197586.13	novel	2708	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	73	junction_1	72.1646939684189	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTCTCGTTGAGCGAC	25190624	True	NA	28	True	AATAAA	-29	NA	25195692	25226729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25195868_25209848_25209926_25213262_25213407_25214866_25214943_25215675_25215712_25216647_25216737_25217501_25217582_25218549_25218615_25221231_25221334_25222837_25222979_25224100_25224158_25225204_25225318_25225498
transcript_89429.known	chr20	+	4116	20	FSM	ENSG00000100994.12	ENST00000216962.9	4116	20	0	0	0	0	multi-exon	TRUE	canonical	3	222	junction_16	21.8268177318447	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTCTGTGTTTCACT	25246187	True	NA	33	True	ATTAAA	-24	NA	25248084	25298012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25248422_25259236_25259339_25269128_25269208_25271382_25271487_25274591_25274724_25276645_25276758_25277243_25277327_25278318_25278463_25279056_25279150_25280265_25280413_25280948_25281113_25282032_25282148_25283175_25283278_25284103_25284252_25288424_25288484_25290480_25290623_25292405_25292614_25294157_25294293_25295603_25295671_25296369
transcript_89438.nnic	chr20	+	2009	5	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	10	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	285.788383248865	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398179	True	NA	24	True	AATAAA	-24	NA	25407682	25448563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_25407896_25425210_25425328_25441701_25441777_25445922_25447066_25448102
transcript_89442.nnic	chr20	+	1902	4	NNC	ENSG00000101003.10	novel	3311	7	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	257.383414815761	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398169	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_25407896_25441701_25441777_25445922_25447066_25448102
transcript_89450.known	chr20	+	3311	7	FSM	ENSG00000101003.10	ENST00000262460.5	3311	7	0	0	0	0	multi-exon	FALSE	canonical	3	526	junction_4	28.0455977928008	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAATGCCTTTTATTTCT	25398169	True	NA	24	True	AATAAA	-24	NA	25407672	25448563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25407896_25413789_25413855_25417103_25417203_25418104_25418196_25425210_25425328_25441701_25441777_25445922
transcript_89454.known	chr20	-	4991	24	FSM	ENSG00000101004.15	ENST00000278886.11	4991	24	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_20	33.5399206318745	141	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTAAGTTTGTTTTTAAT	-25583701	True	NA	-5	True	AATAAA	-21	NA	25585531	25452696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25453643_25455672_25455787_25458382_25458530_25461521_25461636_25462382_25462542_25467388_25467459_25469990_25470096_25476042_25477090_25478922_25479207_25480160_25480268_25481967_25482101_25489243_25489325_25489874_25489986_25491350_25491526_25496662_25496804_25498209_25498347_25500839_25501011_25503951_25504105_25504887_25505079_25510673_25510741_25512833_25513007_25517752_25517850_25526407_25526599_25585454
transcript_89455.known	chr20	-	3803	2	FSM	ENSG00000170191.5	ENST00000304788.4	3803	2	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	0	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCATTCTCCTCATCTCTTT	-25622931	True	NA	NA	False	AATAAA	-18	NA	25624014	25612934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25616582_25623858
transcript_8946.known	chr1	+	587	3	FSM	ENSG00000224167.3	ENST00000456651.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	1	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGCTAGTAATATGAGTGT	112849894	False	NA	7	True	AATAAA	-16	NA	112850027	112877871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112850428_112876939_112876985_112877729
transcript_89469.nnic	chr20	+	826	5	NIC	ENSG00000213742.7	novel	4666	5	NA	NA	-177	102	combination_of_known_splicesites	FALSE	canonical	1	2	junction_4	3.24037034920393	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACCAATTCTTCTCAAACTA	NA	False	NA	NA	False	AATAAA	-19	NA	25623867	25677154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_25624136_25634048_25634171_25634728_25634828_25645530_25645649_25676935
transcript_89476.known	chr20	+	650	5	FSM	ENSG00000213742.7	ENST00000455791.5	650	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	2.29128784747792	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAATGAGACTGAATCAGTA	25623646	False	NA	NA	False	AATAGA	-4	NA	25624058	25677052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25624136_25645530_25645649_25673851_25674008_25674896_25675079_25676935
transcript_89478.known	chr20	-	4237	5	FSM	ENSG00000130684.14	ENST00000252979.6	4237	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	6.97764286847643	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGATCTGGGACACTGACAG	-25696168	True	NA	NA	False	ATTAAA	-16	NA	25696853	25673194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_25677038_25685566_25685663_25685995_25686123_25686390_25686467_25696758
transcript_89481.known	chr20	+	964	4	FSM	ENSG00000213742.7	ENST00000439498.5	964	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2.82842712474619	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGAGACAGGGTCTCACTC	25623646	False	NA	NA	False	GATAAA	-12	NA	25624058	25677548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25624136_25645530_25645649_25673851_25674008_25676935
transcript_89488.known	chr20	+	320	2	FSM	ENSG00000226465.4	ENST00000376445.3	320	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATATATTCTAAGAATGTAT	25751169	True	NA	NA	False	AGTAAA	-12	NA	25751217	25752761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_25751339_25752562
transcript_89491.known	chr20	+	1452	1	FSM	ENSG00000287569.1	ENST00000668826.1	1452	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGTGTCCACGTTCCT	26009510	True	NA	NA	False	ATTAAA	-18	NA	26009791	26011243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_26009800_26011200
transcript_89495.nnic	chr20	+	433	4	Fusion	ENSG00000287569.1_ENSG00000204556.4	novel	353	4	NA	NA	-5	30140	multi-exon	FALSE	canonical	1	1	junction_3	1.4142135623731	5	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGTGGTCCTCACTGA	26009505	True	NA	NA	False	TATAAA	-15	NA	26009786	26050824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_26009890_26019075_26019203_26019828_26019925_26050717
transcript_89497.nnic	chr20	+	286	3	Fusion	ENSG00000287569.1_ENSG00000204556.4	novel	353	4	NA	NA	15	30140	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACAGTGTGGTCCTCACTGA	26009525	True	NA	NA	False	TATAAA	-15	NA	26009806	26050824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_26009890_26019828_26019925_26050717
transcript_895.known	chr1	-	2004	18	FSM	ENSG00000127054.22	ENST00000527098.5	2004	18	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_16	164.280079853518	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGCTGGACAGACCCTGG	-1318743	True	NA	NA	False	NA	NA	NA	1324666	1311822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1323180_1323288_1324580
transcript_89515.nic	chr20	-	1125	10	FSM	ENSG00000282826.3	ENST00000687441.1	1098	10	-28	1	0	0	multi-exon	FALSE	canonical	3	59	junction_1	41.4901445980299	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	-28600855	True	NA	-3	True	AATAAA	-27	NA	28602844	28580632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_89536.known	chr20	-	890	9	FSM	ENSG00000282826.3	ENST00000686258.1	976	9	83	3	8	0	multi-exon	FALSE	canonical	3	67	junction_1	43.8776708588776	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600772	True	NA	0	True	TATAAA	-16	NA	28602761	28583024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28583111_28583869_28583947_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_89547.nic	chr20	-	891	8	ISM	ENSG00000282826.3	ENST00000687441.1	1098	10	-23	2393	0	0	5prime_fragment	FALSE	canonical	3	69	junction_7	38.4909212725308	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTACGTGTGTGTATGCTTTT	-28600850	True	NA	0	True	TATAAA	-16	NA	28602839	28583024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28601656_28601757_28602608
transcript_8955.known	chr1	+	490	2	FSM	ENSG00000224167.3	ENST00000422022.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	0	214	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAAGCTGCTAGTAATATGA	112850065	False	NA	3	True	AATAAA	-12	NA	112850075	112877867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112850428_112877729
transcript_8956.nnic	chr1	-	728	2	NIC	ENSG00000215866.9	novel	700	3	NA	NA	-133	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	0	139	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGTTTGGTGGTCTCT	NA	False	NA	-3	True	AATAAA	-20	NA	112825874	112820172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_112820539_112825512
transcript_89560.nic	chr20	-	331	2	ISM	ENSG00000282826.3	ENST00000687825.1	1203	7	17	15739	0	-15739	5prime_fragment	FALSE	canonical	3	69	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATATCCTGAATGAATGTG	-28600850	True	NA	NA	False	NA	NA	NA	28602839	28601656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_28601757_28602608
transcript_89561.known	chr20	-	769	9	FSM	ENSG00000282826.3	ENST00000358464.10	1025	9	180	76	50	-74	multi-exon	FALSE	canonical	3	59	junction_1	42.703739590345	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGATTTTTGTTTCTGTC	-28600675	False	NA	-33	True	AAAAAG	-37	NA	28602664	28580708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_28580745_28581918_28582030_28583018_28583111_28586298_28586404_28588642_28588758_28590556_28590615_28591393_28591520_28600391_28600462_28602608
transcript_89562.known	chr20	-	1250	3	FSM	ENSG00000205611.5	ENST00000654517.1	1250	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACAGTCCTATATGTGCAT	-30289878	True	NA	NA	False	TATAAA	-16	NA	30289890	30286721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_30287473_30288270_30288533_30289653
transcript_89567.known	chr20	-	2144	2	FSM	ENSG00000205611.5	ENST00000655971.1	2144	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTAGTTATAGGAGCAGATT	NA	False	NA	NA	False	AATATA	-29	NA	30289956	30287014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_30287473_30288270
transcript_89569.nnic	chr20	+	1286	8	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-209	78	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	49.453750812125	22	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	NA	False	NA	NA	False	AATAAA	-27	NA	30377162	30399335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_30377722_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398046_30399221
transcript_89570.nnic	chr20	+	988	8	NNC	ENSG00000149531.15	novel	761	9	NA	NA	-207	78	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_7	47.5707850664327	29	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTTGAGTTGTTGTGAAA	30376067	True	NA	NA	False	AATAAA	-27	NA	30377164	30399335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_30377426_30379584_30379652_30388452_30388579_30391196_30391309_30393550_30393656_30396861_30396954_30397934_30398046_30399221
transcript_8958.nnic	chr1	+	915	4	NNC	ENSG00000226419.8	novel	1508	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	25.0377492776186	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	112955855	True	NA	18	True	AATAAA	-15	NA	112956405	112964072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_112956957_112957558_112957723_112960476_112960576_112963971
transcript_89580.nnic	chr20	+	727	4	FSM	ENSG00000283443.2	ENST00000693526.1	2934	4	-25	2232	0	1959	multi-exon	FALSE	canonical	1	1	junction_1	2.94392028877595	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GCAGGTGGATAAGAGTGAAA	30537455	True	NA	NA	False	AATAAA	-31	NA	30537596	30553429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_30537660_30541993_30542052_30545600_30545728_30552950
transcript_89614.known	chr20	-	489	3	FSM	ENSG00000230613.1	ENST00000412178.1	489	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGGCCTCTGTGGGGTA	-31573235	True	NA	NA	False	AAAAAG	-44	NA	31573263	31567706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31567949_31572798_31572924_31573141
transcript_89615.known	chr20	+	670	1	FSM	ENSG00000101898.6	ENST00000394552.3	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGATATTGATTGTGTCGT	31545693	True	NA	NA	False	TATAAA	-36	NA	31547411	31548081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31547400_31548100
transcript_89616.known	chr20	+	1606	12	FSM	ENSG00000101294.18	ENST00000340852.9	1606	12	0	0	0	0	multi-exon	TRUE	canonical	3	640	junction_4	65.4784047423523	2595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTCTCTGTTTAAGCACCC	31501577	True	NA	49	True	ATTAAA	-42	NA	31514427	31569567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31569119
transcript_89617.known	chr20	+	3932	3	FSM	ENSG00000101294.18	ENST00000498035.5	3932	3	0	0	0	0	multi-exon	FALSE	canonical	3	743	junction_2	8	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGAGTTTTCTTAAATATTT	31501606	True	NA	8	True	ATTAAA	-18	NA	31514456	31541733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178
transcript_89618.known	chr20	+	1715	13	FSM	ENSG00000101294.18	ENST00000398174.9	1715	13	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_12	284.874485031956	269	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCGGGCCACTGTGCTCCT	31501591	True	NA	25	True	ATTAAA	-18	NA	31514441	31569543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31514735_31527483_31527583_31538178_31538262_31544946_31545036_31549028_31549115_31549206_31549333_31550063_31550122_31554745_31554830_31559610_31559648_31561633_31561737_31566209_31566296_31568077_31568225_31569119
transcript_89619.nnic	chr20	+	603	3	Fusion	ENSG00000101294.18_ENSG00000278276.1	novel	455	3	NA	NA	6853	-14	multi-exon	FALSE	canonical	1	1	junction_2	1.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTTTCCCAATCTGTG	31572732	True	NA	1	True	AATAAA	-12	NA	31573006	31581200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_31573076_31577603_31577783_31580845
transcript_89620.known	chr20	+	325	1	FSM	ENSG00000278276.1	ENST00000611296.1	325	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGTGTCTCTTTTAAGCCC	31580833	False	NA	15	True	AATAAA	-26	NA	31580889	31581214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31580900_31581200
transcript_89621.known	chr20	+	983	2	FSM	ENSG00000125968.9	ENST00000376112.4	983	2	0	0	0	0	multi-exon	FALSE	canonical	3	358	junction_1	0	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAGTTGTAGTGACTTCT	31596266	True	NA	12	True	ATTAAA	-19	NA	31605288	31606510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31605814_31606052
transcript_89622.known	chr20	+	1233	1	FSM	ENSG00000125968.9	ENST00000376105.4	1233	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	187	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTAGTGACTTCTTGGGT	31596260	True	NA	17	True	ATTAAA	-24	NA	31605282	31606515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31605300_31606500
transcript_89623.known	chr20	+	338	4	FSM	ENSG00000131055.5	ENST00000490030.1	338	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGACATGAAGGTGAATC	31637921	False	NA	NA	False	NA	NA	NA	31637932	31644828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31637963_31639017_31639100_31639932_31640098_31644767
transcript_89624.known	chr20	+	669	5	FSM	ENSG00000131055.5	ENST00000376075.4	669	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTATTCTCTTCTGCCTCTC	31637900	True	NA	NA	False	AGTAAA	-15	NA	31637911	31645006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31637963_31639017_31639100_31639932_31640098_31643403_31643536_31644767
transcript_89625.nnic	chr20	-	2516	3	NNC	ENSG00000171552.14	novel	2373	3	NA	NA	-24	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_2	161	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721130	False	NA	NA	False	AATAAA	-25	NA	31722621	31664451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_31666087_31721654_31722331_31722416
transcript_89626.known	chr20	-	3212	3	FSM	ENSG00000171552.14	ENST00000676582.1	3212	3	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_2	102	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722038	False	1491	NA	False	AATAAA	-14	NA	31723529	31664462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31722617
transcript_89627.known	chr20	-	2544	3	FSM	ENSG00000171552.14	ENST00000678563.1	2544	3	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_2	155.5	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722487	False	NA	NA	False	AATAAA	-14	NA	31723978	31664462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31723734
transcript_89628.known	chr20	-	2413	3	FSM	ENSG00000171552.14	ENST00000676942.1	2413	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	172.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31722469	True	NA	NA	False	AATAAA	-14	NA	31723960	31664462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31723847
transcript_89629.known	chr20	-	2574	3	FSM	ENSG00000171552.14	ENST00000307677.5	2574	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_2	125	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGAGCCTGGGCTCTTGT	-31720068	True	NA	NA	False	AATAAA	-19	NA	31722868	31664457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722349_31722617
transcript_89630.known	chr20	-	2227	3	FSM	ENSG00000171552.14	ENST00000422920.2	2227	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	64.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCTAGGGTGGCCCTTGC	-31722038	False	1491	NA	False	GGGGCT	-26	NA	31723529	31665258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721843_31722331_31722617
transcript_89633.known	chr20	-	2496	3	FSM	ENSG00000171552.14	ENST00000376055.9	2496	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	41.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721482	False	NA	NA	False	AATAAA	-25	NA	31722973	31664451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721843_31722349_31722617
transcript_89634.known	chr20	-	2578	2	FSM	ENSG00000171552.14	ENST00000376062.6	2578	2	0	0	0	0	multi-exon	FALSE	canonical	3	353	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGGGCTCTTGTGTGCTC	-31721106	False	NA	NA	False	AATAAA	-25	NA	31722597	31664451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654
transcript_89635.known	chr20	-	2441	3	FSM	ENSG00000171552.14	ENST00000434194.2	2441	3	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	174.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721075	False	2800	NA	False	AATAAA	-14	NA	31722566	31664462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722349_31722443
transcript_89636.known	chr20	-	2373	3	FSM	ENSG00000171552.14	ENST00000677194.1	2373	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	175	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAACAAAGAGCCTGGGCT	-31721058	False	2800	NA	False	AATAAA	-14	NA	31722549	31664462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31666087_31721654_31722331_31722476
transcript_89641.known	chr20	+	3473	18	FSM	ENSG00000088325.16	ENST00000300403.11	3473	18	0	0	0	0	multi-exon	FALSE	canonical	3	807	junction_1	80.692247176078	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	31720988	True	NA	20	True	AATAAA	-20	NA	31739289	31801800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_89644.nnic	chr20	+	3481	18	NNC	ENSG00000088325.16	novel	3473	18	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	118	junction_16	225.085020461127	190	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGATTGTGTTATTTGATG	31720959	True	NA	20	True	AATAAA	-20	NA	31739260	31801800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798385_31798553_31800969
transcript_89650.known	chr20	+	3605	19	FSM	ENSG00000088325.16	ENST00000340513.4	3605	19	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_10	319.360322257006	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTTATTTGATGTTTTT	31720969	True	NA	25	True	AATAAA	-25	NA	31739270	31801805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_31739622_31742540_31742648_31757406_31757583_31760056_31760180_31766555_31766683_31770342_31770472_31771559_31771683_31775866_31775989_31777486_31777639_31778812_31778985_31780938_31781047_31782248_31782391_31783704_31783922_31792734_31792831_31793847_31794025_31794401_31794549_31797403_31797516_31798364_31798553_31800969
transcript_89656.nic	chr20	+	600	2	ISM	ENSG00000088325.16	ENST00000340513.4	3605	19	-10	59026	-10	-59021	5prime_fragment	FALSE	canonical	3	807	junction_1	0	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAATCACCCACTATCCCA	31720959	True	NA	NA	False	AAAAAG	-5	NA	31739260	31742779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_31739622_31742540
transcript_8966.known	chr1	+	742	3	FSM	ENSG00000226419.8	ENST00000416193.5	742	3	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	14	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	112955864	True	NA	18	True	AATAAA	-15	NA	112956414	112964072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112956957_112960476_112960576_112963971
transcript_89662.known	chr20	-	1957	5	FSM	ENSG00000088356.6	ENST00000202017.6	1957	5	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_2	24.8935232540514	990	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGATGTTGTCCAGTGTGA	-31947811	True	NA	0	True	AATAAA	-26	NA	31952046	31944336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_31945890_31946495_31946577_31948807_31948883_31950311_31950388_31951874
transcript_89665.nnic	chr20	+	1721	6	NNC	ENSG00000101331.17	novel	2599	10	NA	NA	7793	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_1	16.6493243106139	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTTATGACTCAGTTTAC	32017892	True	NA	15	True	AATAAA	-23	NA	32018242	32032180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_32018315_32022659_32022796_32025855_32025920_32028994_32029125_32029699_32029839_32031000
transcript_8967.known	chr1	+	1897	3	FSM	ENSG00000226419.8	ENST00000420168.2	1897	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	10.5	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATAGGTAGAGCTGGCCG	112956500	False	NA	NA	False	AAAACA	-3	NA	112956519	112969395	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112956957_112960476_112960576_112968034
transcript_89674.known	chr20	+	2101	13	FSM	ENSG00000101336.18	ENST00000375852.5	2101	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_10	2.53174292182722	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTGGTTTTCCTGTCCTTC	32052169	True	NA	18	True	AATAAA	-30	NA	32052241	32101856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073715_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_89675.known	chr20	+	1742	13	FSM	ENSG00000101336.18	ENST00000518730.5	1742	13	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	2.89035753267077	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGGGAGGACCAGGGCAGGG	32052188	True	NA	NA	False	NA	NA	NA	32052260	32101519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32052487_32071661_32071783_32073318_32073362_32073718_32073819_32074622_32074722_32079773_32079878_32083893_32084044_32084390_32084544_32086627_32086808_32088567_32088645_32093862_32094017_32099003_32099136_32101316
transcript_89680.known	chr20	+	3768	18	FSM	ENSG00000101337.16	ENST00000398022.7	3768	18	0	0	0	0	multi-exon	FALSE	canonical	3	222	junction_1	30.1738904985762	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTGTCTTGAATCTCAT	32103309	True	NA	13	True	AATAAA	-17	NA	32109713	32167256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32165294
transcript_89682.nnic	chr20	+	2219	18	NNC	ENSG00000101337.16	novel	3768	18	NA	NA	-130	-1	at_least_one_novel_splicesite	FALSE	canonical	3	33	junction_17	69.6521262067506	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTCTTGAATCTCA	32109541	True	NA	12	True	AATAAA	-16	NA	32109583	32167255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_32109756_32133012_32133127_32136073_32136174_32141496_32141666_32141765_32141896_32142981_32143106_32145090_32145210_32145311_32145424_32146784_32146856_32149633_32149767_32150621_32150704_32150799_32150876_32155102_32155187_32157793_32157970_32158450_32158515_32159991_32160112_32161275_32161366_32166972
transcript_89694.known	chr20	-	3884	1	FSM	ENSG00000235217.6	ENST00000565928.1	3884	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGATCATGTCACTTCCC	-32189534	True	NA	-3	True	AATAAA	-27	NA	32190360	32186476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32186500_32190400
transcript_89696.known	chr20	+	5226	7	FSM	ENSG00000101346.14	ENST00000375749.8	5226	7	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_6	5.79511288357124	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCACATTTTACCAGTCTAG	32204673	True	NA	28	True	AATAAA	-42	NA	32207879	32238658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_89699.known	chr20	+	959	6	FSM	ENSG00000101346.14	ENST00000486717.5	959	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	54.5989010878424	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCTTTGTGAAGCGGGA	32204728	True	NA	NA	False	NA	NA	NA	32207934	32234568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32208066_32215268_32215452_32216608_32216722_32228262_32228456_32230818_32231062_32234472
transcript_89701.known	chr20	+	1507	5	FSM	ENSG00000101346.14	ENST00000375730.3	1507	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	62.2791096596604	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTAGTGTCTTCTATGTGCC	32204686	True	NA	NA	False	AATAAA	-20	NA	32207892	32217923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32208066_32210070_32210193_32215268_32215452_32216608_32216722_32217007
transcript_89702.known	chr20	+	495	5	FSM	ENSG00000171456.21	ENST00000497249.6	495	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.52627944162882	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAAGCTTGGGAGTGGTCT	32359083	False	NA	20	True	AATAAA	-20	NA	32359109	32372238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32359335_32366383_32366467_32367726_32367730_32369014_32369124_32372163
transcript_89703.known	chr20	+	1068	4	NIC	ENSG00000171456.21	novel	7038	12	NA	NA	0	-2	intron_retention	FALSE	non_canonical	0	0	junction_2	22.1710521977545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACGAATTTAGTGAATAATG	32357349	False	NA	NA	False	AATAAA	-14	NA	32358343	32372547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_32358833_32366383_32366468_32369012_32369124_32372163
transcript_89710.nnic	chr20	-	584	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	103	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32483330	False	NA	NA	False	AATAAA	-19	NA	32483368	32464779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32483264
transcript_89711.known	chr20	-	701	3	FSM	ENSG00000197183.15	ENST00000326071.8	701	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	0.5	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32481255	True	NA	NA	False	AATAAA	-19	NA	32483582	32464779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32465118_32474600_32474743_32483361
transcript_89712.nnic	chr20	-	538	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	-901	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_2	22	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32484445	False	NA	NA	False	AATAAA	-19	NA	32484483	32464779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32484425
transcript_89713.nnic	chr20	-	543	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	-1014	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	23.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32484558	False	NA	NA	False	AATAAA	-19	NA	32484596	32464779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32484533
transcript_89715.nnic	chr20	-	699	3	NNC	ENSG00000197183.15	novel	701	3	NA	NA	-1756	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	19.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCACCTGTTTCTTTATTA	-32485300	True	NA	NA	False	AATAAA	-19	NA	32485338	32464779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_32465118_32474600_32474743_32485119
transcript_89716.known	chr20	-	885	2	FSM	ENSG00000197183.15	ENST00000485364.1	885	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCAGTTCACATGATCTAT	-32585008	True	NA	NA	False	ATTAAA	-19	NA	32585074	32548506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32548887_32584569
transcript_89720.known	chr20	-	1343	9	FSM	ENSG00000149600.12	ENST00000446419.6	1343	9	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_8	141.912329890676	760	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGGTCTGGATCCAGTTG	-32740746	True	NA	-55	True	AATAAA	-13	NA	32743455	32702702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_32703459_32704022_32704072_32704439_32704490_32704813_32704905_32706582_32706621_32706703_32706761_32727892_32727996_32728088_32728140_32743307
transcript_8974.known	chr1	-	3753	5	FSM	ENSG00000155380.13	ENST00000369626.8	3753	5	0	0	0	0	multi-exon	FALSE	canonical	3	1098	junction_2	91.3492610807553	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTTTCCTCATCTTTA	-112942784	True	NA	-13	True	AATAAA	-18	NA	112956196	112911846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112914166_112917177_112918045_112921989_112922134_112929091_112929353_112956034
transcript_89743.known	chr20	+	2562	7	FSM	ENSG00000101367.9	ENST00000375571.6	2562	7	0	0	0	0	multi-exon	FALSE	canonical	3	1428	junction_3	113.811857417797	2802	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATGTCTTCTGAAATTTGT	32797887	True	NA	19	True	AATAAA	-20	NA	32819953	32850405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32820029_32825924_32826049_32833716_32833863_32836633_32836842_32839734_32839857_32846617_32846771_32848671
transcript_89744.known	chr20	+	2131	1	FSM	ENSG00000260257.2	ENST00000569087.2	2131	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	40	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAAAAATGGTTCTGTGATT	32856606	False	NA	10	True	AATAAA	-20	NA	32856620	32858751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_32856600_32858800
transcript_89747.nnic	chr20	-	1882	14	NNC	ENSG00000101391.21	novel	2164	15	NA	NA	8	0	at_least_one_novel_splicesite	FALSE	canonical	3	23	junction_13	96.5166080076469	155	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394947	True	NA	-15	True	ATTAAA	-21	NA	33401553	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396853_33401427
transcript_89748.known	chr20	-	1930	14	FSM	ENSG00000101391.21	ENST00000473997.5	1930	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_13	99.441517409055	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394911	True	NA	-15	True	ATTAAA	-21	NA	33401517	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33396937_33401427
transcript_8975.known	chr1	-	452	2	FSM	ENSG00000155380.13	ENST00000478835.1	452	2	0	0	0	0	multi-exon	FALSE	canonical	3	1224	junction_1	0	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGAGTGTCTGTATTAGGT	-112956137	False	NA	NA	False	NA	NA	NA	112956181	112929047	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_112929353_112956034
transcript_89758.nic	chr20	-	1679	12	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_11	106.131526072352	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394940	True	NA	-15	True	ATTAAA	-21	NA	33401546	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33401427
transcript_8976.known	chr1	+	1508	3	FSM	ENSG00000226419.8	ENST00000664314.1	1508	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	20.5	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTATTCTTAAGTATCTTA	112955864	True	NA	18	True	AATAAA	-15	NA	112956414	112964072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112957723_112960476_112960576_112963971
transcript_89764.nic	chr20	-	1646	11	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	37	junction_10	105.648284415792	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394942	True	NA	-15	True	ATTAAA	-21	NA	33401548	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33401427
transcript_89768.nic	chr20	-	1435	10	NIC	ENSG00000101391.21	novel	2164	15	NA	NA	13	0	combination_of_known_junctions	FALSE	canonical	3	36	junction_8	145.15968218942	156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394942	True	NA	-15	True	ATTAAA	-21	NA	33401548	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33392141_33392243_33401427
transcript_8977.known	chr1	+	8803	3	FSM	ENSG00000226419.8	ENST00000428411.6	8803	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCATACTCTGTTCCAGGC	112955864	True	NA	8	True	AATAAA	-19	NA	112956414	112975430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_112957723_112960476_112960576_112968034
transcript_8978.known	chr1	-	2467	3	FSM	ENSG00000238198.2	ENST00000421157.2	2467	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCAGTTGTCAAGTGTCT	-113073046	False	NA	NA	False	AATAAA	-18	NA	113073113	113011686	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113013840_113048422_113048562_113072938
transcript_89783.known	chr20	-	840	6	FSM	ENSG00000101391.21	ENST00000482967.5	840	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	161.480153579318	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394898	True	NA	-15	True	ATTAAA	-21	NA	33401504	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33401427
transcript_89791.known	chr20	-	1891	13	FSM	ENSG00000101391.21	ENST00000339269.5	1891	13	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	103.497584512876	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394955	True	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_89792.known	chr20	-	2080	14	FSM	ENSG00000101391.21	ENST00000346416.7	2080	14	0	0	0	0	multi-exon	FALSE	canonical	3	303	junction_9	41.6312354286251	616	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394913	True	NA	-15	True	ATTAAA	-21	NA	33401519	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_89793.known	chr20	-	2164	15	FSM	ENSG00000101391.21	ENST00000357886.8	2164	15	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_8	126.927345439855	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCTTTGTCTCTCACTTTGA	-33394955	True	NA	-15	True	ATTAAA	-21	NA	33401561	33358838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33359124_33360350_33360492_33366858_33367009_33370498_33370630_33372641_33372698_33374114_33374213_33379460_33379692_33383479_33383522_33385649_33385771_33387322_33387534_33392141_33392243_33394031_33394067_33395012_33395117_33396760_33397085_33401427
transcript_89794.known	chr20	-	2211	8	FSM	ENSG00000101400.6	ENST00000217381.3	2211	8	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_3	6.79735843049733	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTGGTCTGTGCCTTGGC	-33443749	False	NA	-1	True	AATAAA	-35	NA	33443763	33407956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33408600_33408700_33408889_33410134_33410332_33412295_33412427_33412574_33412783_33417718_33417924_33438840_33439027_33443310
transcript_89797.known	chr20	-	723	1	FSM	ENSG00000275223.1	ENST00000621597.1	723	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTTATTTATTATTGTTAT	-33656071	False	NA	NA	False	ACTAAA	-18	NA	33656423	33655700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33655700_33656400
transcript_89799.nic	chr20	-	1668	9	NIC	ENSG00000125967.17	novel	1942	13	NA	NA	-102	0	intron_retention	TRUE	canonical	1	4	junction_8	27.1696061804363	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTTGCCTCCTGTCTCGCA	-33665440	False	NA	-4	True	AATAAA	-18	NA	33666804	33657086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_33657858_33657941_33658034_33658476_33658555_33658721_33658835_33659496_33659551_33659652_33659733_33659884_33660004_33660258_33660396_33666580
transcript_8980.known	chr1	+	11566	18	FSM	ENSG00000198799.12	ENST00000361127.6	11566	18	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_11	16.5228163521723	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTTCTGGTCTTCTTTTGCC	113068631	True	NA	5	True	AATAAA	-17	NA	113073197	113132260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113073646_113091317_113091384_113093205_113093281_113093429_113093565_113094338_113094483_113094611_113094756_113095873_113096018_113096221_113096366_113098704_113098786_113100210_113100283_113100419_113100489_113107593_113107758_113110241_113110563_113112478_113112761_113114426_113114877_113116286_113116437_113119232_113119524_113123874
transcript_89802.known	chr20	+	2254	1	FSM	ENSG00000149609.6	ENST00000607738.1	2254	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTGAGTCTTCTACCTGCA	NA	False	NA	NA	False	AATAAA	-23	NA	33663365	33665619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_33663400_33665600
transcript_89805.known	chr20	-	5690	4	FSM	ENSG00000101417.12	ENST00000409299.8	5690	4	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	5.71547606649408	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATATGTGTATATATTTT	-33719589	True	NA	NA	False	AATAAA	-17	NA	33720310	33702757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33707970_33710554_33710754_33714673_33714737_33720094
transcript_89808.known	chr20	-	989	3	FSM	ENSG00000101417.12	ENST00000344022.7	989	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	11	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAAGTTCTAGATTCCCAC	-33719598	True	NA	NA	False	TTTAAA	-38	NA	33720319	33707268	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33707970_33714673_33714737_33720094
transcript_89810.known	chr20	-	377	1	FSM	ENSG00000230837.1	ENST00000413849.1	377	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGCTGATCATCAAATACCT	NA	False	NA	NA	False	NA	NA	NA	33752543	33752166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33752200_33752500
transcript_89811.known	chr20	+	6213	10	FSM	ENSG00000125970.12	ENST00000246194.8	6213	10	0	0	0	0	multi-exon	FALSE	canonical	3	1228	junction_5	132.681834234391	426	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33989813	True	NA	14	True	AATAAA	-21	NA	33993910	34084884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34073818_34073867_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_89814.known	chr20	+	6430	9	FSM	ENSG00000125970.12	ENST00000375114.7	6430	9	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	426.874030013539	425	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTGGAGTGATTTGTTGT	33993582	False	NA	14	True	AATAAA	-21	NA	33993645	34084884	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_33994132_34031521_34031605_34072065_34072331_34073562_34073636_34075873_34076041_34076701_34076816_34077027_34077246_34078504_34078554_34079909
transcript_89819.nnic	chr20	-	666	3	NNC	ENSG00000285230.3	novel	660	3	NA	NA	-372	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	6	140	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCATTTATTTGTCT	-33993536	False	NA	-2	True	NA	NA	NA	33993559	33992487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_33992906_33993059_33993151_33993402
transcript_89820.known	chr20	-	660	3	FSM	ENSG00000285230.3	ENST00000440595.5	660	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	5.5	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCATTTATTTGTCT	-33994332	False	NA	-2	True	NA	NA	NA	33994355	33992487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33992906_33993059_33993151_33994204
transcript_89821.known	chr20	-	610	2	FSM	ENSG00000285230.3	ENST00000432859.1	610	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGTCCCAAGGTGTGCA	-33992580	True	NA	NA	False	AATAAA	-16	NA	33993124	33983051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_33983597_33993059
transcript_89839.known	chr20	-	2556	9	FSM	ENSG00000125977.7	ENST00000374980.3	2556	9	0	0	0	0	multi-exon	FALSE	canonical	3	3667	junction_8	376.82636502108	8530	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAACGCTCCATTGCTTTTG	-34093087	True	NA	-14	True	AATAAA	-26	NA	34112243	34088308	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34089906_34090516_34090603_34093674_34093732_34096656_34096806_34097415_34097517_34098497_34098634_34103461_34103566_34105367_34105546_34112095
transcript_89841.known	chr20	-	2150	10	FSM	ENSG00000101444.13	ENST00000217426.7	2150	10	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_6	129.394697164609	3913	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATTTTGAGCCTTTATTTT	-34257887	True	NA	-20	True	AATAAA	-18	NA	34303355	34280267	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290450_34290550_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_89842.known	chr20	-	2211	9	FSM	ENSG00000101444.13	ENST00000480653.5	2211	9	0	0	0	0	multi-exon	FALSE	canonical	3	1449	junction_5	135.252945901374	833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGAATTTTGAGCCTTTATT	-34257849	True	NA	-22	True	AATAAA	-16	NA	34303317	34280269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34281166_34285439_34285635_34290331_34290639_34290730_34290939_34291418_34291532_34292357_34292508_34294080_34294157_34295394_34295586_34303242
transcript_89843.known	chr20	+	6743	25	FSM	ENSG00000078747.16	ENST00000374864.10	6743	25	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_4	5.98478974846513	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTTTTTTAAATCTATAAAT	34358752	True	NA	NA	False	NA	NA	NA	34363272	34511773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34363350_34369393_34369471_34393790_34393882_34408650_34408793_34412514_34412640_34413741_34413880_34424479_34424526_34438473_34438632_34440154_34440345_34442207_34442304_34445286_34445462_34449410_34449481_34457389_34457475_34462092_34462222_34470047_34470121_34471443_34471516_34477771_34477861_34479629_34479790_34480598_34480733_34481065_34481207_34489265_34489387_34489821_34489927_34492500_34492598_34504330_34504404_34507694
transcript_89848.nic	chr20	+	735	3	ISM	ENSG00000125971.17	ENST00000374846.3	1044	4	9812	-112	9812	112	3prime_fragment	FALSE	canonical	3	700	junction_1	22.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTCCGAGAGGCCTGCTGC	34515468	False	NA	150	True	NA	NA	NA	34526266	34541070	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_34526344_34534627_34534796_34540580
transcript_89849.known	chr20	+	205	2	FSM	ENSG00000078747.16	ENST00000479215.1	205	2	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGAGGAGAGAGCAGTGTTG	34358774	True	NA	NA	False	NA	NA	NA	34363294	34369543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34363350_34369393
transcript_89858.known	chr20	+	1044	4	FSM	ENSG00000125971.17	ENST00000374846.3	1044	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	341.084870507164	1276	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505656	True	NA	38	True	ACTAAA	-18	NA	34516454	34540958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516877_34526267_34526344_34534627_34534796_34540580
transcript_89860.known	chr20	+	662	4	FSM	ENSG00000125971.17	ENST00000357156.7	662	4	0	0	0	0	multi-exon	FALSE	canonical	3	519	junction_1	97.6740611535234	10352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505623	True	NA	38	True	ACTAAA	-18	NA	34516421	34540958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516462_34526267_34526344_34534627_34534796_34540580
transcript_89861.known	chr20	+	1053	5	FSM	ENSG00000125971.17	ENST00000480759.1	1053	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	325.703373485753	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGTCTGTTGTGTCTTTAA	34505615	True	NA	38	True	ACTAAA	-18	NA	34516413	34540958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516462_34526267_34526344_34529851_34530235_34534627_34534796_34540580
transcript_89862.known	chr20	+	1464	3	FSM	ENSG00000125971.17	ENST00000300469.13	1464	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	259.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATGTTTTTTATCACTTGAA	34505645	True	NA	NA	False	ATTAAA	-20	NA	34516443	34531221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34516462_34526267_34526344_34529851
transcript_89864.known	chr20	+	964	4	FSM	ENSG00000101460.13	ENST00000360668.8	964	4	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_2	6.64997911442	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCCTCCAGCCGCTTG	34557654	True	NA	15	True	AATAAA	-22	NA	34558717	34560345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34558909_34559207_34559264_34559346_34559454_34559735
transcript_89871.known	chr20	-	1639	12	FSM	ENSG00000101464.11	ENST00000217446.8	1639	12	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_5	8.09448337801893	1321	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTGAGACCACATCTGCAT	-34674806	True	NA	-12	True	AATAAA	-22	NA	34677092	34560541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34645274_34645335_34657179_34657245_34676955
transcript_89873.known	chr20	-	1248	11	FSM	ENSG00000101464.11	ENST00000374820.6	1248	11	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_9	56.8665982805372	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTGGCTGGCACAGGGCTG	-34674799	True	NA	NA	False	NA	NA	NA	34677085	34560865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34560980_34575103_34575247_34581547_34581673_34585436_34585581_34588452_34588608_34616041_34616140_34634614_34634716_34637875_34637986_34644163_34644227_34657179_34657245_34676955
transcript_89887.known	chr20	+	2885	18	FSM	ENSG00000131069.20	ENST00000360596.7	2885	18	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_2	12.8975199461465	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGTGGTGACTTGTTTTCT	34874860	True	NA	15	True	AATAAA	-15	NA	34876611	34927959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34876824_34882793_34882990_34913095_34913188_34913392_34913497_34913752_34913826_34914095_34914172_34914322_34914438_34919434_34919573_34920538_34920710_34921005_34921140_34921329_34921463_34921543_34921601_34921785_34921867_34923322_34923432_34925697_34925767_34926104_34926282_34926876_34926952_34927086
transcript_89888.known	chr20	-	2638	15	FSM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	11.8599394292427	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATGGCTCTGGTTTAATTT	-34869280	True	NA	-6	True	ATTAAA	-18	NA	34872856	34844719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34845492_34849960_34850061_34851230_34851369_34852154_34852273_34852388_34852539_34854530_34854620_34854795_34854924_34856805_34856894_34859442_34859640_34859968_34860043_34860253_34860322_34861444_34861563_34862813_34862966_34863312_34863549_34872646
transcript_89890.nic	chr20	-	1512	4	ISM	ENSG00000131067.17	ENST00000336431.10	2638	15	0	15929	0	2165	5prime_fragment	FALSE	canonical	3	105	junction_2	2.49443825784929	109	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAGGCAGGGGT	-34869280	True	NA	NA	False	NA	NA	NA	34872856	34860648	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_34861563_34862813_34862966_34863312_34863549_34872646
transcript_89892.nic	chr20	+	472	2	ISM	ENSG00000131069.20	ENST00000493805.6	603	5	-35	30423	-17	0	5prime_fragment	FALSE	canonical	3	86	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCTATCTTATACTTGGTG	34874803	True	NA	7	True	GATAAA	-22	NA	34876554	34882996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_34876824_34882793
transcript_89893.known	chr20	+	567	4	FSM	ENSG00000131069.20	ENST00000480274.1	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	34.4189870081423	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGGGCTGGTGAAAAGGGG	34874828	True	NA	NA	False	GGGGCT	-23	NA	34876579	34913503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_34876748_34882793_34882990_34913095_34913188_34913392
transcript_89895.known	chr20	-	3138	19	FSM	ENSG00000100991.12	ENST00000451813.6	3138	19	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	135.80797309273	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021333_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_89896.known	chr20	-	3162	19	FSM	ENSG00000100991.12	ENST00000252015.3	3162	19	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_11	103.962540737244	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGACCTGGCTTTT	-35076424	True	NA	-9	True	AATAAA	-44	NA	35092807	35002403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35003284_35003409_35003617_35004457_35004571_35005694_35005804_35006434_35006576_35007549_35007641_35008663_35008748_35010186_35010289_35013007_35013067_35016007_35016140_35021189_35021357_35035122_35035309_35044504_35044713_35049865_35049995_35054975_35055032_35057513_35057572_35069295_35069413_35078045_35078175_35092613
transcript_89898.known	chr20	-	1909	13	FSM	ENSG00000100983.12	ENST00000651619.1	1909	13	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	29.1074398660472	698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGATTCCTTACTTCGTG	-34950994	True	NA	-5	True	AATAAA	-19	NA	34955806	34928431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_89899.known	chr20	-	2131	13	FSM	ENSG00000100983.12	ENST00000642498.1	2131	13	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	65.4647912154991	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTAATTCTGCCTTAAAT	-34950971	True	NA	-46	True	NA	NA	NA	34955783	34928472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34929238_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34941712_34941830_34942487_34942628_34942930_34943007_34945952_34946099_34951723_34951861_34955726
transcript_89900.known	chr20	-	1554	10	FSM	ENSG00000100983.12	ENST00000646735.1	1554	10	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_7	77.7604742656878	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGATGATTCCTTACTTCGT	-34950973	True	NA	-6	True	AATAAA	-18	NA	34955785	34928432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34928952_34929400_34929591_34931335_34931418_34931938_34932134_34935575_34935643_34936762_34936841_34936942_34937024_34945952_34946099_34951723_34951861_34955726
transcript_89901.known	chr20	-	920	3	FSM	ENSG00000100983.12	ENST00000643628.1	920	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAATGTTCAAGAGAATGC	-34950971	True	NA	NA	False	NA	NA	NA	34955783	34949428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_34950155_34951723_34951861_34955726
transcript_89903.known	chr20	-	1756	10	FSM	ENSG00000088298.13	ENST00000374491.3	1756	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	55.8848021479106	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-35145627	True	NA	0	True	AATAAA	-19	NA	35147319	35115363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35147151
transcript_89918.nnic	chr20	+	296	3	Intergenic	novelGene_35	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_2	1	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTATCAGGACTCTTCTTTCT	NA	False	NA	NA	False	AATAAA	-24	NA	35147412	35150449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr20_+_35147487_35147685_35147791_35150332
transcript_89920.known	chr20	-	1884	11	FSM	ENSG00000088298.13	ENST00000374492.8	1884	11	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_5	20.5817880661521	248	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGTTATCATGTTTTAC	-35145644	True	NA	0	True	AATAAA	-19	NA	35147336	35115363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35115934_35118597_35118720_35123889_35124035_35126250_35126376_35131641_35131784_35134737_35134950_35137879_35138006_35142372_35142479_35144978_35145019_35146824_35146936_35147151
transcript_89922.known	chr20	-	1054	7	FSM	ENSG00000242372.9	ENST00000675032.1	1054	7	0	0	0	0	multi-exon	TRUE	canonical	3	14	junction_6	482.303068619722	1294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGTTTGGGGCCCTCAGCCT	-35275599	False	NA	-6	True	ATTAAA	-32	NA	35284717	35278906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284696
transcript_89932.known	chr20	+	1349	4	FSM	ENSG00000101000.6	ENST00000216968.5	1349	4	0	0	0	0	multi-exon	FALSE	canonical	3	155	junction_1	7.76029781788188	611	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTTATCTCCTCCACTTTG	35169117	True	NA	28	True	AATAAA	-19	NA	35172071	35177362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35172225_35174701_35174954_35176167_35176447_35176697
transcript_89937.known	chr20	-	798	4	FSM	ENSG00000242372.9	ENST00000440766.5	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	653.467843296227	920	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275405	False	539	-10	True	ATTAAA	-28	NA	35284523	35278910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284380
transcript_8994.known	chr1	-	2742	11	FSM	ENSG00000134262.13	ENST00000256658.8	2742	11	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.9410574038719	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-113905031	False	NA	-2	True	ATTAAA	-20	NA	113905070	113894747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604_113904794_113904941
transcript_89943.known	chr20	-	1499	3	FSM	ENSG00000126005.17	ENST00000435366.2	1499	3	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	4.5	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTATAAAACACTGTACAAA	-35268909	False	9118	-23	True	AATAAA	-12	NA	35278027	35276360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35277298_35277389_35277933_35278008
transcript_89945.known	chr20	-	932	6	FSM	ENSG00000242372.9	ENST00000447927.6	932	6	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	442.209633544996	1843	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	NA	False	NA	-10	True	ATTAAA	-28	NA	35284804	35278910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284262_35284380_35284493_35284725
transcript_89946.known	chr20	-	1069	7	FSM	ENSG00000242372.9	ENST00000374450.8	1069	7	0	0	0	0	multi-exon	FALSE	canonical	3	971	junction_6	161.195533436879	5833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGAATGTGATGTTTGGG	-35275654	True	NA	-17	True	ATTAAA	-21	NA	35284772	35278917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380_35284493_35284725
transcript_89947.known	chr20	-	1017	5	FSM	ENSG00000242372.9	ENST00000374443.7	1017	5	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	488.68055772662	1110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275652	True	NA	-10	True	ATTAAA	-28	NA	35284770	35278910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35284175_35284493_35284725
transcript_89948.known	chr20	-	1252	6	FSM	ENSG00000242372.9	ENST00000374436.7	1252	6	0	0	0	0	multi-exon	FALSE	canonical	3	1123	junction_3	127.673646458461	2557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGATGTTTGGGGCCCTCA	-35275597	False	NA	-10	True	ATTAAA	-28	NA	35284715	35278910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35279207_35279565_35279748_35279941_35280119_35280653_35280830_35284175_35284262_35284380
transcript_89956.known	chr20	-	2267	10	FSM	ENSG00000101019.22	ENST00000374385.10	2267	10	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_9	23.4662878757307	428	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCTCCTGGAATGGATGGA	-35410678	True	NA	-10	True	AATAAA	-20	NA	35411973	35302577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_89963.known	chr20	-	758	9	FSM	ENSG00000101019.22	ENST00000424405.5	758	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	98.0254271860113	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCAGAGCATCCTGAAG	-35410678	True	NA	NA	False	NA	NA	NA	35411973	35303990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35394091_35394197_35411939
transcript_89968.known	chr20	-	2201	9	FSM	ENSG00000101019.22	ENST00000374384.6	2201	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	105.560113205699	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410678	True	NA	2	True	AATAAA	-32	NA	35411973	35302565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35347163_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_89970.known	chr20	-	2133	8	FSM	ENSG00000101019.22	ENST00000374380.6	2133	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	108.228405490897	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410736	True	NA	2	True	AATAAA	-32	NA	35412031	35302565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35374183_35374257_35394091_35394197_35411939
transcript_89978.known	chr20	-	1035	7	FSM	ENSG00000101019.22	ENST00000453855.5	1035	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	113.694644650582	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGACTTAGAAACTTGCCTG	-35410665	True	NA	19	True	ATTAAA	-43	NA	35411960	35303432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314708_35381983_35382026_35384037_35384134_35394091_35394197_35411939
transcript_89979.known	chr20	-	1987	7	FSM	ENSG00000101019.22	ENST00000457259.5	1987	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	115.969344608344	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410663	True	NA	2	True	AATAAA	-32	NA	35411958	35302565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35394091_35394197_35411939
transcript_89998.known	chr20	-	2188	9	FSM	ENSG00000101019.22	ENST00000349714.9	2188	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	104.828431257937	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGATGGAAAAATTAATGGA	-35410668	True	NA	2	True	AATAAA	-32	NA	35411963	35302565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35304070_35306665_35306780_35314687_35314766_35347163_35347273_35366556_35366615_35381925_35382026_35384037_35384134_35394091_35394197_35411939
transcript_89999.known	chr20	-	3638	7	FSM	ENSG00000101019.22	ENST00000397554.5	3638	7	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_6	26.6207938774685	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCTTTGGAATTCTTTTTTA	-35410679	True	NA	1	True	AATAAA	-34	NA	35411974	35344109	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35347273_35366556_35366615_35374183_35374257_35381917_35382026_35384037_35384134_35394091_35394197_35411939
transcript_9.known	ERCC-00022	+	735	1	FSM	ERCC-00022A	DQ855004	735	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	965	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0		NA	False	NA	NA	False	NA	NA	NA	0	735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_ERCC-00022_+_0_700
transcript_9000.known	chr1	-	3173	10	FSM	ENSG00000134262.13	ENST00000369569.6	3173	10	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_9	21.5767364435763	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGCGAATCCAGAATGGGAA	-113904760	False	NA	NA	False	AATAAA	-19	NA	113904799	113894193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113902637_113902863_113904604
transcript_90001.nic	chr20	+	1523	10	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	-58	0	combination_of_known_junctions	FALSE	canonical	2	4	junction_1	16.6733320005331	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	NA	False	NA	7	True	AATAAA	-20	NA	35455105	35470132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_35455238_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_90002.nic	chr20	+	1469	10	NIC	ENSG00000126001.16	novel	2156	14	NA	NA	1	0	combination_of_known_junctions	FALSE	canonical	2	7	junction_1	15.8885003837506	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35452922	True	NA	7	True	AATAAA	-20	NA	35455164	35470132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_35455243_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_90003.known	chr20	+	1419	10	FSM	ENSG00000126001.16	ENST00000397524.5	1419	10	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_1	14.1325296766619	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35455613	False	NA	7	True	AATAAA	-20	NA	35455723	35470132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35455752_35458303_35458375_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_90006.nic	chr20	+	1785	9	ISM	ENSG00000126001.16	ENST00000461386.5	2295	15	-310	7934	86	0	5prime_fragment	FALSE	canonical	2	7	junction_1	15.7480157480236	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTAATTAACTCATTCATTTA	35453044	True	NA	7	True	AATAAA	-20	NA	35455286	35470132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_35455752_35459982_35460106_35462264_35462554_35463574_35463632_35465742_35465826_35466038_35466205_35466965_35467073_35467303_35467556_35469889
transcript_9001.nic	chr1	-	2196	10	NIC	ENSG00000134262.13	novel	2742	11	NA	NA	-5	0	combination_of_known_junctions	TRUE	canonical	1	1	junction_8	30.6340406157014	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGCTTGTCTAGAGT	-113905022	False	NA	-8	True	AATAAA	-13	NA	113905061	113895059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113901235_113901384_113901754_113901886_113904604_113904794_113904941
transcript_90013.known	chr20	+	1302	13	FSM	ENSG00000125991.21	ENST00000348547.7	1302	13	0	0	0	0	multi-exon	FALSE	canonical	3	656	junction_1	84.1263517309265	6509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35532213	True	NA	29	True	GATAAA	-24	NA	35542077	35557634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_90014.known	chr20	+	1357	14	FSM	ENSG00000125991.21	ENST00000357394.8	1357	14	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	318.048412823281	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35542007	False	NA	29	True	GATAAA	-24	NA	35542037	35557634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35554371_35554387_35555043_35555076_35556032_35556130_35556206_35556272_35556972_35557110_35557193_35557250_35557424
transcript_90015.known	chr20	+	601	5	FSM	ENSG00000125991.21	ENST00000411577.5	601	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	345.46128581941	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCCTGGGTCAGGAATTTAG	35532251	True	NA	NA	False	AATAAA	-18	NA	35542115	35543909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542186_35542322_35542394_35542512_35542601_35542821_35542942_35543657
transcript_90016.known	chr20	+	766	3	FSM	ENSG00000125991.21	ENST00000488384.1	766	3	0	0	0	0	multi-exon	FALSE	canonical	3	908	junction_2	34.5	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCACTGGTCTCCGTGTGAT	35556581	False	NA	29	True	GATAAA	-24	NA	35556609	35557634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35557110_35557193_35557250_35557424
transcript_90017.known	chr20	+	781	8	FSM	ENSG00000125991.21	ENST00000496172.5	781	8	0	0	0	0	multi-exon	FALSE	canonical	3	799	junction_5	54.6831317497378	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACGGAGAGGTGAGTCAGGG	35540720	True	NA	NA	False	NA	NA	NA	35542442	35556262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35542601_35542821_35542942_35547411_35547506_35548508_35548675_35548807_35548866_35555043_35555076_35556032_35556130_35556206
transcript_90020.nic	chr20	+	1515	11	ISM	ENSG00000061656.11	ENST00000679710.1	1542	12	829	45	-222	0	3prime_fragment	FALSE	canonical	2	8	junction_2	15.8521291945278	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35616638	True	NA	14	True	ATTAAA	-27	NA	35616657	35621049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_35617241_35617519_35617587_35617778_35617841_35618086_35618131_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_90025.nic	chr20	+	1707	10	NIC	ENSG00000061656.11	novel	1542	12	NA	NA	-222	0	intron_retention	FALSE	canonical	2	9	junction_1	14.6059348668044	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35616638	True	NA	14	True	ATTAAA	-27	NA	35616657	35621049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_35617241_35617519_35617841_35618086_35618131_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_90034.nnic	chr20	+	976	8	NIC	ENSG00000061656.11	novel	1542	12	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_1	18.1737644500449	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35616839	True	NA	14	True	ATTAAA	-27	NA	35617023	35621049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_35617241_35618449_35618476_35618611_35618721_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_90041.known	chr20	+	687	7	FSM	ENSG00000061656.11	ENST00000498203.1	687	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.5230383525031	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCGTTTCACGTGCTTGT	35617594	False	NA	NA	False	NA	NA	NA	35617688	35620934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35617841_35618449_35618476_35618922_35618999_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_90044.nnic	chr20	+	826	5	NIC	ENSG00000061656.11	novel	1542	12	NA	NA	-61	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	24.0039059321603	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35616943	False	NA	14	True	ATTAAA	-27	NA	35616962	35621049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_35617241_35619194_35619311_35619578_35619747_35620683_35620774_35620875
transcript_90046.nic	chr20	+	558	3	ISM	ENSG00000061656.11	ENST00000498203.1	687	7	1764	-115	-132	0	3prime_fragment	FALSE	canonical	3	47	junction_2	9	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35619326	True	NA	14	True	ATTAAA	-27	NA	35619452	35621049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_35619747_35620683_35620774_35620875
transcript_90047.known	chr20	+	453	3	FSM	ENSG00000061656.11	ENST00000430878.1	453	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	23.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTCTGCTGAAGGATACTGG	35619458	False	NA	14	True	ATTAAA	-27	NA	35619584	35621049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35619747_35620656_35620774_35620875
transcript_90075.known	chr20	-	3008	13	FSM	ENSG00000244005.13	ENST00000374092.9	3008	13	0	0	0	0	multi-exon	TRUE	canonical	3	109	junction_9	21.0480600847996	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTAATTTGGCTGGGTGTG	-35697752	True	NA	NA	False	ATTAAA	-19	NA	35699352	35668051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_90076.known	chr20	-	1956	13	FSM	ENSG00000244005.13	ENST00000397425.5	1956	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_12	42.0333862013942	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACTCACCTTCTATTTACT	-35697749	True	NA	-25	True	NA	NA	NA	35699349	35668982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35669686_35672754_35672845_35673600_35673685_35674349_35674432_35674511_35674618_35675044_35675203_35680736_35680872_35681887_35681982_35690412_35690566_35696376_35696461_35697683_35697801_35698480_35698591_35699309
transcript_9008.nic	chr1	-	1912	8	NIC	ENSG00000134262.13	novel	2742	11	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	2	junction_6	33.324624712739	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGTTGCTTGTCTAGAGT	-113905017	False	NA	-8	True	AATAAA	-13	NA	113905056	113895059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113904604_113904794_113904941
transcript_90086.known	chr20	-	738	5	FSM	ENSG00000244005.13	ENST00000306750.3	738	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	55.5922656490991	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTTCTCATTTATGTTCTT	-35697704	True	NA	NA	False	TATAAA	-12	NA	35699304	35694571	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35694886_35696376_35696461_35697683_35697801_35698480_35698591_35699191
transcript_9009.known	chr1	-	2418	7	FSM	ENSG00000081019.14	ENST00000615321.1	2418	7	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_5	9.39266853573691	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGTCAAGCATATCTTTT	-113810044	True	NA	NA	False	TATAAA	-18	NA	113812289	113765847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113766454_113767098_113767208_113768221_113768390_113777209_113777353_113777670_113777809_113797362_113798037_113811709
transcript_90090.known	chr20	+	288	3	FSM	ENSG00000125995.16	ENST00000397416.1	288	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	1964	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTGCCAACTACATCTGTC	35681982	True	NA	-54	True	NA	NA	NA	35699450	35700910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699495_35699632_35699764_35700797
transcript_90091.known	chr20	-	5213	3	FSM	ENSG00000244462.8	ENST00000374104.7	5213	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_2	226	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCAACTACTTTGTTATTT	-35641316	True	NA	-6	True	ATTAAA	-17	NA	35664900	35650325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35658983_35664759
transcript_90092.known	chr20	-	6646	3	FSM	ENSG00000244462.8	ENST00000374114.8	6646	3	0	0	0	0	multi-exon	FALSE	canonical	3	460	junction_2	68.5	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAGTACTTTACTGAGCT	-35641316	True	NA	7	True	AATAAA	-32	NA	35664900	35648924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35659015_35664759
transcript_90095.known	chr20	-	1068	3	FSM	ENSG00000244462.8	ENST00000424458.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	256	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCAGTGTGAAGCCACTCCC	-35641305	True	NA	NA	False	NA	NA	NA	35664889	35654449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35659015_35664801
transcript_90096.known	chr20	-	565	3	FSM	ENSG00000244462.8	ENST00000435161.1	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	278.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTGCCACCACTTCTGTTCA	-35641350	True	NA	NA	False	NA	NA	NA	35664934	35654920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35659015_35664878
transcript_90098.known	chr20	-	583	3	FSM	ENSG00000244462.8	ENST00000431148.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_2	277.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAAAACATACAGACATTT	-35641372	True	NA	NA	False	NA	NA	NA	35664956	35654892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35655345_35658929_35658983_35664878
transcript_901.known	chr1	-	2114	17	FSM	ENSG00000127054.22	ENST00000435064.6	2114	17	0	0	0	0	multi-exon	FALSE	canonical	3	447	junction_10	44.9576189316116	462	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTACTTGGTACTCTCTTCTT	-1318737	True	NA	-17	True	AGTAAA	-15	NA	1324660	1311599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_90101.known	chr20	-	1952	16	FSM	ENSG00000214078.13	ENST00000397443.7	1952	16	0	0	0	0	multi-exon	TRUE	canonical	3	338	junction_15	126.405625753849	528	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35641316	True	NA	-15	True	AATAAA	-17	NA	35664900	35626043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664759
transcript_90102.known	chr20	-	625	2	FSM	ENSG00000214078.13	ENST00000462352.5	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	909	junction_1	0	500	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTGCCACCACTCTCTT	-35626832	False	NA	-15	True	AATAAA	-17	NA	35626853	35626043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626566
transcript_90103.known	chr20	-	1695	16	FSM	ENSG00000214078.13	ENST00000397442.5	1695	16	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_1	217.885352115893	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAAAGACCAGTGAAGACC	-35641291	True	NA	-37	True	NA	NA	NA	35664875	35626065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35626382_35626734_35626804_35627279_35627414_35630438_35630491_35630740_35630796_35630900_35631035_35631113_35631174_35631267_35631355_35631491_35631579_35631687_35631778_35631944_35632026_35632162_35632235_35632310_35632386_35632516_35632697_35632794_35632924_35664801
transcript_90104.known	chr20	+	366	3	FSM	ENSG00000125995.16	ENST00000374077.8	366	3	0	0	0	0	multi-exon	FALSE	canonical	3	1885	junction_1	1031	41156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681936	True	NA	16	True	AATAAA	-17	NA	35699404	35700980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699457_35699632_35699764_35700797
transcript_90105.known	chr20	+	496	2	FSM	ENSG00000125995.16	ENST00000336695.4	496	2	0	0	0	0	multi-exon	FALSE	canonical	3	3947	junction_1	0	6598	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTGTCCCTCTCTTAAA	35681982	True	NA	16	True	AATAAA	-17	NA	35699450	35700980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699764_35700797
transcript_90106.known	chr20	+	350	3	FSM	ENSG00000125995.16	ENST00000374072.5	350	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	939.5	471	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGTCAGTGTCCCTCTCTTA	35681973	True	NA	14	True	AATAAA	-15	NA	35699441	35700978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35699457_35699632_35699764_35700774
transcript_9011.known	chr1	-	2144	7	FSM	ENSG00000134262.13	ENST00000369567.5	2144	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_6	34.1829229619443	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGATAGGGGTCATCATTTG	-113904789	False	NA	-2	True	ATTAAA	-20	NA	113904828	113894747	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113895493_113895756_113896039_113896257_113896466_113897839_113897944_113898717_113898802_113899903_113900401_113904604
transcript_90110.known	chr20	-	3131	19	FSM	ENSG00000131051.24	ENST00000656873.1	3131	19	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_18	478.702245144278	303	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATATTACTGTATTAAGGGG	-35711521	True	NA	NA	False	ATTAAA	-10	NA	35742266	35703223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940_35742114_35742244
transcript_90130.known	chr20	-	2883	18	FSM	ENSG00000131051.24	ENST00000403542.6	2883	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	386.861875514561	1473	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGAGATCTTCATTTTT	-35711529	True	NA	-6	True	AATAAA	-17	NA	35742274	35703610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_90131.known	chr20	-	2831	17	FSM	ENSG00000131051.24	ENST00000361162.10	2831	17	0	0	0	0	multi-exon	FALSE	canonical	3	695	junction_5	267.319148853482	4146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAGGAGATCTTCATTTTTC	-35711567	False	NA	-5	True	AATAAA	-18	NA	35742312	35703609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740823_35740888_35741940
transcript_90132.known	chr20	-	4580	16	FSM	ENSG00000131051.24	ENST00000463004.5	4580	16	0	0	0	0	multi-exon	FALSE	canonical	3	814	junction_5	243.825803027945	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGGAGATCTTCATTTTTCA	-35711491	True	NA	-4	True	AATAAA	-19	NA	35742236	35703608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35740888_35741940
transcript_90133.known	chr20	-	2124	18	FSM	ENSG00000131051.24	ENST00000444878.5	2124	18	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_15	397.070736204739	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-35711503	True	NA	-14	True	AATAAA	-15	NA	35742248	35704325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709257_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35738967_35739018_35740524_35740598_35740823_35740888_35741940
transcript_90134.known	chr20	-	2149	18	FSM	ENSG00000131051.24	ENST00000429968.5	2149	18	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_15	511.710571849518	3305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCAGTGTGCTCATTCTCCC	-35711511	True	NA	-14	True	AATAAA	-15	NA	35742256	35704325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35704582_35704667_35704747_35705224_35705331_35707119_35707202_35709223_35709275_35713018_35713097_35714184_35714390_35716739_35716806_35721739_35721878_35724569_35724723_35725037_35725156_35729311_35729366_35729461_35729528_35731940_35732136_35734185_35734258_35738967_35739018_35740823_35740888_35741940
transcript_90135.known	chr20	-	869	4	FSM	ENSG00000131051.24	ENST00000463098.5	869	4	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	681.811313096715	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTATTCCTGTTCCCTTT	-35711482	True	NA	NA	False	AGTAAA	-28	NA	35742227	35739102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35739548_35740524_35740598_35740823_35740888_35741940
transcript_90136.known	chr20	-	840	3	FSM	ENSG00000131051.24	ENST00000426951.5	840	3	0	0	0	0	multi-exon	FALSE	canonical	3	1128	junction_2	159	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGTTTTGAAGATTAGATCA	-35710092	False	NA	94	True	AATAAA	-19	NA	35740837	35731359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35732136_35738967_35739018_35740823
transcript_90137.known	chr20	-	612	4	FSM	ENSG00000131051.24	ENST00000397370.3	612	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	683.178356409706	1245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTAGTGTGGATTTCGATAA	-35711487	True	NA	-79	True	ATTAAA	-42	NA	35742232	35734875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35735082_35738967_35739018_35740823_35740888_35741940
transcript_90141.known	chr20	+	1814	12	FSM	ENSG00000025293.17	ENST00000374000.8	1814	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	79.9088323503936	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAACCAAACCTGGTAATTTT	35766717	True	NA	NA	False	AAAAAG	-14	NA	35772025	35913335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35800093_35800174_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_90162.nnic	chr20	+	546	4	NNC	ENSG00000025293.17	novel	1814	12	NA	NA	-25	21505	at_least_one_novel_splicesite	FALSE	canonical	3	25	junction_1	21.6846079563875	260	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGTGTGGTGGTGTGTG	35766640	True	NA	NA	False	AATAAA	-14	NA	35771948	35823477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_35772080_35800093_35800174_35801490_35801606_35823257
transcript_90168.known	chr20	+	618	2	FSM	ENSG00000025293.17	ENST00000617560.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	0	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGATACTTTGTCTCTTTCT	35766724	True	NA	11	True	AATAAA	-22	NA	35772032	35775058	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35774487
transcript_90169.known	chr20	+	5879	18	FSM	ENSG00000025293.17	ENST00000374012.8	5879	18	0	0	0	0	multi-exon	FALSE	canonical	3	166	junction_13	29.9511713353562	448	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTCAGTTACGTATTGTT	35766706	True	NA	10	True	AATAAA	-18	NA	35772014	35950370	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35858301_35858382_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248_35913348_35914032_35914198_35917483_35917663_35927779_35927880_35931248_35931445_35938696_35939109_35940863_35941048_35947484
transcript_90170.known	chr20	+	1635	10	FSM	ENSG00000025293.17	ENST00000481202.5	1635	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	76.1715088824693	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAGAAAAAGAAAAAGAA	35766717	True	NA	NA	False	AATAAA	-43	NA	35772025	35913316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35772080_35801490_35801606_35842572_35842745_35847349_35847435_35863012_35863401_35869437_35869552_35870954_35871135_35871649_35871830_35899369_35899649_35913248
transcript_90175.known	chr20	-	771	2	FSM	ENSG00000171222.11	ENST00000305978.7	771	2	0	0	0	0	multi-exon	FALSE	canonical	3	592	junction_1	0	444	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGGTCTGGTGTGTCTCTT	-35945125	True	NA	-5	True	AATGAA	-21	NA	35954502	35953623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_35954340_35954447
transcript_90176.known	chr20	+	662	1	FSM	ENSG00000149646.12	ENST00000614708.1	662	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	268	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTGTTTTTACTTTTTAA	35954392	True	NA	4	True	AATAAA	-17	NA	35954706	35955368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_35954700_35955400
transcript_90180.known	chr20	+	2561	5	FSM	ENSG00000131043.13	ENST00000680247.1	2561	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	115.770246609394	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36232923	True	NA	17	True	ATTAAA	-7	NA	36236477	36256921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_90181.known	chr20	+	3187	5	FSM	ENSG00000131043.13	ENST00000680639.1	3187	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	116.279834881204	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTGAGACAATCCCCTTG	36236120	False	NA	17	True	ATTAAA	-7	NA	36236130	36256921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236783_36236881_36237038_36239820_36240626_36244696_36244927_36255577
transcript_90183.known	chr20	+	2417	4	FSM	ENSG00000131043.13	ENST00000320849.9	2417	4	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	52.6265670128269	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232923	True	NA	29	True	ATTAAA	-19	NA	36236477	36256933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36255577
transcript_90184.known	chr20	+	2689	4	FSM	ENSG00000131043.13	ENST00000373932.3	2689	4	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	111.613420140929	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCCCTTGTGTGTGTGTGTC	36232930	True	NA	29	True	ATTAAA	-19	NA	36236484	36256933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236783_36239820_36240626_36244696_36244927_36255577
transcript_90189.known	chr20	+	1412	2	FSM	ENSG00000131043.13	ENST00000681771.1	1412	2	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTACGTTCCTTTTTTTCTG	36232923	True	NA	NA	False	TTTAAA	-13	NA	36236477	36241206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36239820
transcript_90191.known	chr20	+	2863	4	FSM	ENSG00000131043.13	ENST00000680811.1	2863	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	110.203851515675	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTGAGACAATCCCCTTGT	36232929	True	NA	18	True	ATTAAA	-8	NA	36236483	36256922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236967_36239820_36240626_36244696_36244927_36255577
transcript_90192.known	chr20	+	2490	5	FSM	ENSG00000131043.13	ENST00000680412.1	2490	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	97.0386520928645	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCTTCGAGTTGAGACAAT	36232909	True	NA	10	True	NA	NA	NA	36236463	36256914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36236504_36239820_36240626_36244696_36244927_36246200_36246279_36255577
transcript_90196.nnic	chr20	+	1245	7	NNC	ENSG00000080845.19	novel	3110	7	NA	NA	-34	25	intron_retention	FALSE	canonical	2	9	junction_2	124.260032011728	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGCGAACGGAACAGAGTTT	36461420	False	NA	26	True	ATTAAA	-15	NA	36461433	36527084	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_36461511_36496704_36496851_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_90197.known	chr20	+	3110	7	FSM	ENSG00000080845.19	ENST00000475894.5	3110	7	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	36.9628191565524	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTGTGGCATTATTGCA	36461327	False	NA	27	True	AATAAA	-19	NA	36461337	36528637	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36461511_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_90199.known	chr20	+	2392	7	FSM	ENSG00000080845.19	ENST00000340491.8	2392	7	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	123.844885060125	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TCAACAAAAATCACGAAACT	36458322	False	NA	NA	False	NA	NA	NA	36461746	36527239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36462600_36496704_36497067_36499587_36499677_36500198_36500612_36524249_36524342_36525850_36526007_36526812
transcript_9021.nic	chr1	-	854	2	ISM	ENSG00000081019.14	ENST00000615321.1	2418	7	-204	32119	-17	-31822	5prime_fragment	FALSE	canonical	3	93	junction_1	0	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAAAAAGAAACACCGAGAAG	NA	False	NA	NA	False	AATAAA	-10	NA	113812493	113797966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_113798037_113811709
transcript_9022.known	chr1	+	3755	4	FSM	ENSG00000118655.7	ENST00000650450.2	3755	4	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_3	14.522013940528	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTTGCATTTTTATTTCC	113903502	True	NA	21	True	AATGAA	-15	NA	113905325	113914086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113905776_113906995_113907162_113908008_113908192_113911130
transcript_90228.known	chr20	-	1207	5	FSM	ENSG00000232907.9	ENST00000439595.5	1207	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5.30919014539883	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTTGGCGTGACTTGTTAT	-36573024	True	NA	-17	True	AATAAA	-21	NA	36573275	36507701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36508275_36508811_36508826_36510879_36511033_36571440_36571544_36572911
transcript_90231.known	chr20	+	2786	4	FSM	ENSG00000101335.10	ENST00000279022.7	2786	4	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_2	28.4057897071863	767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TACCTGCAGCATATTTAACA	36533048	True	NA	9	True	ATTAAA	-25	NA	36541518	36551447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36541562_36544858_36545069_36548031_36548194_36549076
transcript_90242.known	chr20	+	1024	3	FSM	ENSG00000101335.10	ENST00000346786.2	1024	3	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	156.5	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGTCTGTGTGTCTGTGGCT	36533026	True	NA	34	True	AATAGA	-18	NA	36541496	36549825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36541562_36544858_36545069_36549076
transcript_90248.known	chr20	-	664	3	FSM	ENSG00000232907.9	ENST00000656949.1	664	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	6	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTACCAGTCTCAGGTATTC	-36573036	True	NA	NA	False	AATAAA	-17	NA	36573287	36563325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36563511_36571440_36571544_36572911
transcript_9025.known	chr1	+	1960	3	FSM	ENSG00000118655.7	ENST00000648795.1	1960	3	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_1	7.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAACTTAATCTGTTTAA	113903509	True	NA	4	True	ATTAAA	-18	NA	113905332	113912464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113905776_113908008_113908192_113911130
transcript_90253.known	chr20	+	918	5	FSM	ENSG00000259399.1	ENST00000558530.1	918	5	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	541.632947668437	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCGATTCTCCATCGGGTG	36572882	True	NA	3	True	ATTAAA	-8	NA	36574552	36612384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36574636_36578740_36578967_36607714_36607819_36609600_36609731_36612009
transcript_90256.known	chr20	+	1170	5	FSM	ENSG00000101084.19	ENST00000483815.5	1170	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_2	579.342299508676	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594709	True	NA	36	True	AATAAA	-20	NA	36605788	36612557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36609600_36609731_36612009
transcript_90262.known	chr20	+	1044	4	FSM	ENSG00000101084.19	ENST00000492721.5	1044	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	567.703169701288	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594705	True	NA	36	True	AATAAA	-20	NA	36605784	36612557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36607889_36608001_36612009
transcript_90264.known	chr20	+	1069	4	FSM	ENSG00000101084.19	ENST00000344795.8	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	1062	junction_2	82.0609529557146	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594699	True	NA	36	True	AATAAA	-20	NA	36605778	36612557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36609600_36609731_36612009
transcript_90266.known	chr20	+	1059	4	FSM	ENSG00000101084.19	ENST00000373852.9	1059	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	540.135168268092	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594737	True	NA	36	True	AATAAA	-20	NA	36605816	36612557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36609600_36609759_36612009
transcript_9027.known	chr1	-	571	3	FSM	ENSG00000235527.7	ENST00000441071.5	571	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTGAGTCATCGTCTCTATA	-113929308	False	NA	NA	False	AATAAA	-17	NA	113929318	113923999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113924333_113928243_113928389_113929225
transcript_90272.known	chr20	+	3432	3	FSM	ENSG00000118707.11	ENST00000373874.6	3432	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	181	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36573463	False	NA	38	True	AATAAA	-28	NA	36573487	36593950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36573653_36578740_36578967_36590909
transcript_90273.known	chr20	+	3416	3	FSM	ENSG00000118707.11	ENST00000373872.9	3416	3	0	0	0	0	multi-exon	FALSE	canonical	3	200	junction_1	91	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGGGTTCTTGATTGATCCA	36569663	True	NA	38	True	AATAAA	-28	NA	36573596	36593950	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36573746_36578740_36578967_36590909
transcript_90275.known	chr20	+	3344	3	FSM	ENSG00000118707.11	ENST00000611732.4	3344	3	0	0	0	0	multi-exon	FALSE	canonical	3	145	junction_1	118.5	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGAAACAGGGTTCTTGATTG	36572883	True	NA	33	True	AATAAA	-23	NA	36574553	36593945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36574636_36578740_36578967_36590909
transcript_90277.known	chr20	+	896	3	FSM	ENSG00000101084.19	ENST00000342422.3	896	3	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_2	596.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTGTTGATGATACCTGATA	36594742	True	NA	36	True	AATAAA	-20	NA	36605821	36612557	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_36606066_36607714_36607819_36612009
transcript_9028.known	chr1	-	1541	2	FSM	ENSG00000235527.7	ENST00000670954.1	1541	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTAATATGTCGATTTTACC	-113929485	True	NA	NA	False	ACTAAA	-29	NA	113929495	113924043	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_113924333_113928243
transcript_90280.known	chr20	-	2971	16	FSM	ENSG00000101079.21	ENST00000349004.6	2971	16	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_13	17.20258378526	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGATTGCTGGTGTTATTT	-36744378	True	NA	-6	True	AATAAA	-22	NA	36746090	36651770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36706971_36707008_36721678_36721784_36746044
transcript_90282.known	chr20	-	2917	15	FSM	ENSG00000101079.21	ENST00000359675.6	2917	15	0	0	0	0	multi-exon	TRUE	canonical	3	16	junction_13	39.2311959375938	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGCTGGTGTTATTTCTTTC	-36744355	True	NA	-1	True	AATAAA	-27	NA	36746067	36651765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36653702_36656359_36656412_36656496_36656533_36660336_36660385_36665045_36665098_36665235_36665302_36666288_36666393_36671340_36671398_36680815_36680903_36682517_36682579_36684412_36684476_36687491_36687613_36688678_36688785_36721678_36721784_36746044
transcript_90284.known	chr20	-	2441	11	FSM	ENSG00000149636.16	ENST00000426836.5	2441	11	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_10	71.4401147815427	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTTGAGTGTATAAACAA	-36770030	True	NA	1	True	ATTAAA	-23	NA	36773751	36751790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773393
transcript_90290.known	chr20	-	2129	10	FSM	ENSG00000149636.16	ENST00000448110.6	2129	10	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_9	73.7278947830182	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770039	True	NA	-3	True	ATTAAA	-19	NA	36773760	36751794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36773661
transcript_90297.known	chr20	-	2181	11	FSM	ENSG00000149636.16	ENST00000373750.9	2181	11	0	0	0	0	multi-exon	FALSE	canonical	3	198	junction_9	30.4934419178944	367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770042	True	NA	-3	True	ATTAAA	-19	NA	36773763	36751794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771194_36771424_36771474_36773661
transcript_90298.known	chr20	-	1915	10	FSM	ENSG00000149636.16	ENST00000373734.8	1915	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_8	73.4193098696004	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770097	True	NA	-3	True	ATTAAA	-19	NA	36773818	36751794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36771424_36771474_36773661
transcript_90299.known	chr20	-	1922	11	FSM	ENSG00000149636.16	ENST00000373740.7	1922	11	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_9	75.9447167352674	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36769999	True	NA	-3	True	ATTAAA	-19	NA	36773720	36751794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770978_36771424_36771474_36773661
transcript_90300.known	chr20	-	2075	12	FSM	ENSG00000149636.16	ENST00000473615.5	2075	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	76.3304040242969	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770076	True	NA	-3	True	ATTAAA	-19	NA	36773797	36751794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36770975_36771114_36771194_36771424_36771474_36773661
transcript_90301.known	chr20	-	2447	10	FSM	ENSG00000149636.16	ENST00000480153.5	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_6	27.4702982137183	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTTTTGAGTGTATAA	-36770077	True	NA	-3	True	ATTAAA	-19	NA	36773798	36751794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36752898_36754762_36754851_36755681_36755830_36758086_36758162_36758557_36758618_36762460_36762549_36766768_36766842_36767968_36768043_36770872_36771474_36773661
transcript_90303.known	chr20	-	4649	16	FSM	ENSG00000101347.11	ENST00000646673.2	4649	16	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_7	22.338208423138	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTCCATCTTGAAAGTTG	-36947714	True	NA	-28	True	AATAAA	-15	NA	36951708	36890228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_90304.known	chr20	-	3209	17	FSM	ENSG00000101347.11	ENST00000646869.1	3209	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	44.7974172665121	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCTGCAAAACAACTTGAATC	-36947720	True	NA	-50	True	NA	NA	NA	36951714	36890903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36891808_36892578_36893067_36897821_36897960_36898439_36898545_36904156_36904250_36905363_36905504_36911217_36911334_36912460_36912553_36916721_36916831_36916948_36917050_36919363_36919520_36927181_36927253_36930759_36930876_36935028_36935190_36941038_36941112_36946737_36946805_36951435
transcript_90308.known	chr20	+	1394	1	FSM	ENSG00000269846.1	ENST00000598590.1	1394	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	17	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTTGTTCCATTATTTG	37095661	True	NA	3	True	AATAAA	-16	NA	37095784	37097178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37095800_37097200
transcript_90309.known	chr20	-	5686	22	FSM	ENSG00000080839.12	ENST00000373664.8	5686	22	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_11	8.1627437475109	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCTTTTCTGTATGACTGGA	-37093922	True	NA	-19	True	AATAAA	-29	NA	37095997	36996348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_36998930_37003701_37003867_37007410_37007560_37018278_37018370_37020658_37020731_37022649_37022827_37032664_37032877_37035241_37035509_37040152_37040286_37044085_37044251_37047052_37047191_37055552_37055657_37056145_37056259_37061102_37061270_37062083_37062271_37065423_37065474_37066723_37066885_37066992_37067122_37067232_37067298_37067985_37068187_37088988_37089123_37095772
transcript_9031.nnic	chr1	-	731	6	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	3	16	junction_2	53.8724419346293	63	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114032311	False	NA	-16	True	ATTAAA	-24	NA	114032322	114014903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114015170_114016060_114016157_114021928_114022043_114022679_114022781_114026725_114026776_114032218
transcript_90314.known	chr20	+	2348	17	FSM	ENSG00000118705.17	ENST00000373622.9	2348	17	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_2	1061.5405502588	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37170593	False	NA	NA	False	AATAAA	-18	NA	37179160	37241619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37179370_37184179_37184374_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37238401_37238450_37241302
transcript_90315.known	chr20	+	2227	17	FSM	ENSG00000118705.17	ENST00000237530.11	2227	17	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	274.732988269975	1870	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAAGGCCTGATTGAGAGCT	37162779	True	NA	NA	False	AATAAA	-18	NA	37179329	37241619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37199049_37199226_37203884_37203961_37204766_37204902_37207272_37207450_37210046_37210166_37213759_37213866_37223877_37223970_37225687_37225803_37228549_37228745_37229972_37230060_37232295_37232392_37234019_37234096_37236579_37236710_37241302
transcript_90316.known	chr20	+	712	6	FSM	ENSG00000118705.17	ENST00000462163.1	712	6	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_3	1058.85587310077	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCGGGTAAGACATCCATG	37162779	True	NA	NA	False	NA	NA	NA	37179329	37207443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37179370_37184179_37184374_37198396_37198493_37203884_37203961_37204766_37204902_37207272
transcript_90319.known	chr20	+	1539	5	FSM	ENSG00000101363.13	ENST00000397152.7	1539	5	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	189.592160966639	2148	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283799	True	NA	9	True	AATAAA	-21	NA	37289662	37317260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37289687_37297295_37297535_37298762_37298880_37301207_37301414_37316307
transcript_90325.known	chr20	+	1191	3	FSM	ENSG00000101363.13	ENST00000373606.8	1191	3	0	0	0	0	multi-exon	FALSE	canonical	3	133	junction_1	186.5	2451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37283791	True	NA	9	True	AATAAA	-21	NA	37289654	37317260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37289687_37301207_37301414_37316307
transcript_90330.known	chr20	+	1503	4	FSM	ENSG00000101363.13	ENST00000397151.1	1503	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	218.663109727168	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGCCTGTGTTGTCTTTTG	37297265	True	NA	9	True	AATAAA	-21	NA	37297344	37317260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37297535_37298762_37298880_37301170_37301414_37316307
transcript_90341.known	chr20	-	588	3	FSM	ENSG00000166619.15	ENST00000445723.5	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	8	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGCATGATCCCGGCGTTGTG	-37518958	True	NA	NA	False	NA	NA	NA	37527878	37518939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37521318_37521410_37527792
transcript_90342.known	chr20	-	581	3	FSM	ENSG00000166619.15	ENST00000414080.1	581	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAACTGTTTCCTGTACCA	-37518958	True	NA	NA	False	NA	NA	NA	37527878	37518988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37521318_37521452_37527792
transcript_90343.known	chr20	+	1222	2	FSM	ENSG00000053438.11	ENST00000346199.3	1222	2	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_1	0	523	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTCTCTTGTGATTTCT	37514955	True	NA	17	True	NA	NA	NA	37521205	37523690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37521404_37522666
transcript_90345.known	chr20	-	419	1	FSM	ENSG00000276603.1	ENST00000620327.1	419	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGGTTAGACTGTCTTTT	-37518140	False	NA	NA	False	AAAACA	-41	NA	37527060	37526641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37526600_37527100
transcript_90346.known	chr20	-	2018	2	FSM	ENSG00000166619.15	ENST00000373537.7	2018	2	0	0	0	0	multi-exon	FALSE	canonical	3	631	junction_1	0	1421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-37518956	True	NA	-12	True	AATAAA	-16	NA	37527876	37517416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37527792
transcript_90347.known	chr20	+	998	3	FSM	ENSG00000053438.11	ENST00000647955.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	209.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGATCTTGCTTTTCCCT	37514990	True	NA	44	True	ACTAAA	-29	NA	37521240	37523474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37521404_37522357_37522385_37522666
transcript_90348.known	chr20	-	2036	2	FSM	ENSG00000166619.15	ENST00000397137.5	2036	2	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGTGGTTTTATGTGGCT	-37518812	False	NA	-12	True	AATAAA	-16	NA	37527732	37517416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37519351_37527630
transcript_90356.known	chr20	+	1890	16	FSM	ENSG00000132792.19	ENST00000361383.11	1890	16	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_8	31.0046591480843	1447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCCGGGCCAGTTTTCTTT	37683719	True	NA	14	True	ATTAAA	-14	NA	37694029	37872118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746608_37757558_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_90365.known	chr20	+	1990	17	FSM	ENSG00000132792.19	ENST00000621317.4	1990	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	163.642414562209	465	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGTTTTCTTTGTAGTTAAGC	37693926	True	NA	24	True	ATTAAA	-24	NA	37693954	37872128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_37694153_37732878_37733068_37737377_37737485_37746467_37746631_37757045_37757050_37757570_37757657_37765196_37765291_37767952_37768045_37777344_37777418_37777653_37777713_37779186_37779336_37802866_37803049_37840101_37840200_37842338_37842420_37859898_37860037_37860271_37860345_37871924
transcript_90371.known	chr20	-	3958	9	FSM	ENSG00000101407.13	ENST00000373448.6	3958	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_8	180.137274043991	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGAAGTTTTTTATTTAA	-38027968	True	NA	0	True	AATAAA	-37	NA	38033461	37983006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38019004_38019145_38033403
transcript_90373.known	chr20	-	3799	8	FSM	ENSG00000101407.13	ENST00000373447.8	3799	8	0	0	0	0	multi-exon	FALSE	canonical	3	346	junction_7	35.8437652905506	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38027963	True	NA	-14	True	AATAAA	-23	NA	38033456	37983020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38011514_38013858_38033403
transcript_90375.nnic	chr20	-	1792	7	NIC	ENSG00000101407.13	novel	3799	8	NA	NA	-331	0	combination_of_known_splicesites	FALSE	canonical	3	31	junction_6	147.819052297808	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38033780	False	NA	-14	True	AATAAA	-23	NA	38033792	37983020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38002627_38002777_38006196_38006398_38033403
transcript_90376.nnic	chr20	-	1312	6	NIC	ENSG00000101407.13	novel	3799	8	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	17	junction_4	194.899563878424	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATCAAAAGCTCACTTTGA	-38027968	True	NA	-14	True	AATAAA	-23	NA	38033461	37983020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_37983640_37996374_37996463_37996748_37996954_37999187_37999329_38006196_38006398_38033403
transcript_90381.known	chr20	+	3672	7	FSM	ENSG00000101413.12	ENST00000373433.9	3672	7	0	0	0	0	multi-exon	FALSE	canonical	3	125	junction_2	18.5262576421203	281	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGTGTGATTTTTTTTTT	38033157	True	NA	8	True	AATAAA	-19	NA	38033745	38092364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38034099_38040434_38040565_38048347_38048482_38057531_38057645_38059393_38059521_38066080_38066257_38089725
transcript_90383.known	chr20	+	383	2	FSM	ENSG00000285347.1	ENST00000479646.1	383	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTACGTGTTCACCAGCTC	NA	False	NA	NA	False	AATAAA	-34	NA	38260205	38288947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38260357_38288715
transcript_90388.nnic	chr20	+	1004	6	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23149	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.35646599662505	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	38369602	True	NA	5	True	AATAAA	-18	NA	38369630	38377013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38369994_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_90389.nnic	chr20	+	685	6	NNC	ENSG00000129988.6	novel	1825	15	NA	NA	23155	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	1.35646599662505	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGATGGAATCACCTGGTA	38369608	True	NA	5	True	AATAAA	-18	NA	38369636	38377013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38369681_38370737_38370806_38371279_38371323_38373071_38373136_38373936_38374014_38376624
transcript_90398.known	chr20	-	868	6	FSM	ENSG00000196756.14	ENST00000654183.2	874	6	6	0	0	0	multi-exon	FALSE	canonical	3	79	junction_5	52.8454349967904	247	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGCTTCTTAAATCAGTGAC	-38431143	True	NA	-17	True	AATAAA	-20	NA	38435377	38420586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_90399.known	chr20	-	1044	6	FSM	ENSG00000196756.14	ENST00000665181.1	1044	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_5	84.8396133890295	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431122	True	NA	-22	True	AATAAA	-15	NA	38435356	38420591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38435026
transcript_90400.known	chr20	-	1037	6	FSM	ENSG00000196756.14	ENST00000456953.7	1043	6	4	2	0	0	multi-exon	FALSE	canonical	3	114	junction_5	43.9344966967871	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_90401.known	chr20	-	1192	7	FSM	ENSG00000196756.14	ENST00000660885.2	1202	7	10	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	71.0656973042081	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_90402.known	chr20	-	1279	8	FSM	ENSG00000196756.14	ENST00000668054.2	1291	8	6	6	0	0	multi-exon	FALSE	canonical	3	16	junction_4	80.1559704066811	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431122	True	NA	-24	True	AATAAA	-13	NA	38435356	38420593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_90403.known	chr20	-	1301	8	FSM	ENSG00000196756.14	ENST00000665735.1	1301	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_4	78.7688429027931	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38425934_38426049_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_90404.known	chr20	-	893	5	FSM	ENSG00000196756.14	ENST00000655520.2	897	5	4	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	83.2150827674887	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431122	True	NA	-18	True	AATAAA	-19	NA	38435356	38420587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38426418_38426504_38431040_38431113_38435026
transcript_90405.known	chr20	-	1022	7	FSM	ENSG00000196756.14	ENST00000665233.2	1026	7	4	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	73.1355286817259	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431143	True	NA	-18	True	AATAAA	-19	NA	38435377	38420587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_90406.known	chr20	-	1154	7	FSM	ENSG00000196756.14	ENST00000664073.2	1166	7	10	2	0	0	multi-exon	FALSE	canonical	2	6	junction_2	76.7485070430255	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435026
transcript_90407.known	chr20	-	1173	8	FSM	ENSG00000196756.14	ENST00000658905.1	1173	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	89.567213389084	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422290_38422369_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_90408.known	chr20	-	1077	8	FSM	ENSG00000196756.14	ENST00000656320.1	1077	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	80.7331204320375	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTGCTTCTTAAATCAGT	-38431118	True	NA	-20	True	AATAAA	-17	NA	38435352	38420589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422091_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435196
transcript_90409.known	chr20	-	923	7	FSM	ENSG00000196756.14	ENST00000417578.7	934	7	9	2	-6	0	multi-exon	FALSE	canonical	1	2	junction_3	86.7571642895015	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431085	True	NA	-22	True	AATAAA	-15	NA	38435319	38420591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38425934_38426053_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_90410.known	chr20	-	968	7	FSM	ENSG00000196756.14	ENST00000669480.1	968	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	81.5815883368028	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422095_38422242_38426418_38426504_38431040_38431113_38434519_38434627_38435196
transcript_90411.known	chr20	-	1364	9	FSM	ENSG00000196756.14	ENST00000661252.1	1364	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	83.0237164911328	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTGCTTCTTAAATCA	-38431118	True	NA	-22	True	AATAAA	-15	NA	38435352	38420591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38425934_38426049_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_90412.known	chr20	-	1230	8	FSM	ENSG00000196756.14	ENST00000664636.1	1230	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_5	82.1596256176515	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTCCATGTGCTTCTTAAAT	-38431100	True	NA	-24	True	AATAAA	-13	NA	38435334	38420593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38421099_38422086_38422242_38426418_38426504_38427679_38427767_38431040_38431113_38434503_38434627_38435026
transcript_90413.known	chr20	-	1979	6	FSM	ENSG00000196756.14	ENST00000658051.1	1979	6	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_2	67.1595116122802	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGCTTCTTAAATCAGTGA	-38431112	True	NA	-18	True	AATAAA	-19	NA	38435346	38420587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38420901_38421005_38422242_38426418_38426504_38431040_38431113_38434503_38434627_38435196
transcript_90414.known	chr20	+	1299	6	FSM	ENSG00000174365.21	ENST00000666350.1	1299	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	24.738633753706	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445748	True	NA	14	True	AATAAA	-14	NA	38446679	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_90415.known	chr20	+	1234	6	FSM	ENSG00000174365.21	ENST00000432153.6	1234	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	29.0489242485845	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGCTTGTTCTTTCATT	38445740	True	NA	15	True	AATAAA	-15	NA	38446671	38450922	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_90417.known	chr20	+	1073	6	FSM	ENSG00000174365.21	ENST00000440918.6	1073	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5620024713262	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445740	True	NA	14	True	AATAAA	-14	NA	38446671	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446853_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_90418.known	chr20	+	1229	6	FSM	ENSG00000174365.21	ENST00000656824.1	1229	6	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	24.8145118831703	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGCTTGTTCTTTCATTT	38445756	True	NA	16	True	AATAAA	-16	NA	38446687	38450923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446949_38447465_38447624_38447929_38448094_38448661_38448731_38450261_38450448_38450532
transcript_90419.known	chr20	+	1172	6	FSM	ENSG00000174365.21	ENST00000666020.1	1172	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	31.5620024713262	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445756	True	NA	14	True	AATAAA	-14	NA	38446687	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446968_38447465_38447624_38447929_38448094_38448661_38448731_38450335_38450448_38450532
transcript_90422.known	chr20	+	1116	5	FSM	ENSG00000174365.21	ENST00000434729.7	1143	5	27	0	2	0	multi-exon	FALSE	canonical	2	4	junction_2	26.3569250862084	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445763	True	NA	14	True	AATAAA	-14	NA	38446694	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261_38450448_38450532
transcript_90424.known	chr20	+	1046	5	FSM	ENSG00000174365.21	ENST00000421599.6	1093	5	42	5	-2	0	multi-exon	FALSE	canonical	2	4	junction_2	29.7268817739096	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445759	True	NA	14	True	AATAAA	-14	NA	38446690	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450335_38450448_38450532
transcript_90426.known	chr20	+	954	5	FSM	ENSG00000174365.21	ENST00000449351.5	954	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	28.0446073247603	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445769	True	NA	14	True	AATAAA	-14	NA	38446700	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446853_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_90427.nic	chr20	+	917	5	NIC	ENSG00000174365.21	novel	1073	6	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	28.3240180765371	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445732	True	NA	14	True	AATAAA	-14	NA	38446663	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_38446853_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_90428.known	chr20	+	1068	5	FSM	ENSG00000174365.21	ENST00000667760.2	1076	5	7	1	2	0	multi-exon	FALSE	canonical	3	15	junction_1	23.4773827331754	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445750	True	NA	13	True	AATAAA	-13	NA	38446681	38450920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450261_38450448_38450532
transcript_90429.known	chr20	+	967	5	FSM	ENSG00000174365.21	ENST00000359074.9	967	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	27.4863602537695	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445769	True	NA	13	True	AATAAA	-13	NA	38446700	38450920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450335_38450448_38450532
transcript_90434.known	chr20	+	1169	4	FSM	ENSG00000174365.21	ENST00000437028.5	1169	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	7.48331477354788	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445795	True	NA	14	True	AATAAA	-14	NA	38446726	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448665_38448731_38450261
transcript_90435.known	chr20	+	1152	4	FSM	ENSG00000174365.21	ENST00000670898.2	1154	4	2	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	20.5318181259127	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445742	True	NA	14	True	AATAAA	-14	NA	38446673	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447013_38447465_38447624_38448661_38448731_38450335
transcript_90439.known	chr20	+	1156	4	FSM	ENSG00000174365.21	ENST00000656427.1	1156	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	20.9814733091416	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445740	True	NA	14	True	AATAAA	-14	NA	38446671	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38446941_38447465_38447624_38448661_38448731_38450261
transcript_90440.nic	chr20	+	1098	4	ISM	ENSG00000174365.21	ENST00000669083.1	1005	5	-8	0	-4	0	intron_retention	FALSE	canonical	3	15	junction_1	20.9920619917784	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGCTTGTTCTTTCAT	38445732	True	NA	14	True	AATAAA	-14	NA	38446663	38450921	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38446949_38447465_38447624_38448661_38448731_38450335
transcript_90445.known	chr20	+	1581	3	FSM	ENSG00000174365.21	ENST00000669338.2	1607	3	25	1	0	0	multi-exon	FALSE	canonical	3	53	junction_1	5.5	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGCTGCTTGTTCTTTCA	38445765	True	NA	13	True	AATAAA	-13	NA	38446696	38450920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38447624_38448661_38448731_38450335
transcript_90446.known	chr20	+	2458	3	FSM	ENSG00000174365.21	ENST00000660884.1	2458	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_1	4.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCTTGAAACATGCCCTGC	38445827	False	NA	-1	True	NA	NA	NA	38446758	38450906	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38448731_38450335_38450448_38450532
transcript_90449.known	chr20	+	2370	4	FSM	ENSG00000101447.15	ENST00000619850.2	2370	4	0	0	0	0	multi-exon	FALSE	canonical	3	538	junction_3	54.3588896951445	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTTCCCCCCCTCTGACA	38916501	True	NA	12	True	AATAAA	-21	NA	38926416	38953106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38926926_38941958_38942127_38947875_38948001_38951538
transcript_9045.nnic	chr1	-	635	5	Antisense	novelGene_ENSG00000116774.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	36	junction_4	39.9593543491383	354	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAATGTGTTTGTAATTAATC	-114032311	False	NA	-16	True	ATTAAA	-24	NA	114032322	114014903	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114015170_114021928_114022043_114022679_114022781_114026725_114026776_114032218
transcript_90450.known	chr20	+	638	1	FSM	ENSG00000274825.1	ENST00000620080.1	638	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAGTTGTCTAATTTTTTT	38955897	False	NA	5	True	AATAAA	-16	NA	38955909	38956547	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38955900_38956500
transcript_90451.known	chr20	-	187	1	FSM	ENSG00000261431.1	ENST00000570096.1	187	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	47	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAACTTGTCGACTTCTG	-38961945	True	NA	-4	True	ATTAAA	-26	NA	38962111	38961924	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_38961900_38962100
transcript_90452.known	chr20	+	3318	22	FSM	ENSG00000101452.15	ENST00000484417.5	3318	22	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_4	21.2000513412291	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960133	True	NA	18	True	AGTAAA	-34	NA	38962359	39039721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988792_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_90454.known	chr20	+	3314	22	FSM	ENSG00000101452.15	ENST00000252011.8	3314	22	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_17	11.2980643697671	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CACCTGGTTTTCGTGTCTGT	38960117	True	NA	18	True	AGTAAA	-34	NA	38962343	39039721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38962408_38969080_38969215_38972558_38972652_38983698_38983777_38988812_38988918_38991453_38991516_38992355_38992426_38994820_38994881_39001729_39001843_39002771_39002869_39003748_39003908_39006145_39006357_39010279_39010405_39014879_39014935_39018803_39018900_39021840_39021936_39023689_39023768_39025229_39025360_39028417_39028500_39030703_39030776_39034205_39034318_39038498
transcript_90459.nnic	chr20	+	470	3	NNC	ENSG00000101452.15	novel	3287	21	NA	NA	-9	-67780	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	39.5	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGCAACAAGAAGTTAAGAA	38960063	True	NA	NA	False	CATAAA	-25	NA	38962289	38970856	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_38962408_38969080_38969215_38970638
transcript_90460.nic	chr20	+	1896	2	ISM	ENSG00000101452.15	ENST00000373323.8	2347	21	-54	67989	-9	-67778	5prime_fragment	FALSE	canonical	3	79	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GCAACAAGAAGTTAAGAAAT	38960063	True	NA	NA	False	CATAAA	-27	NA	38962289	38970858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_38962408_38969080
transcript_90461.known	chr20	+	522	1	FSM	ENSG00000277581.1	ENST00000615559.1	522	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGTGTGTTATTTTCTTTT	38960245	False	NA	NA	False	AATAAA	-16	NA	38962471	38962993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_38962500_38963000
transcript_90462.nnic	chr20	-	942	2	Antisense	novelGene_ENSG00000233415.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGTCATTATATGGAAAA	NA	False	NA	NA	False	AAGAAA	-4	NA	40095918	40028136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_40028785_40095624
transcript_90465.nnic	chr20	-	781	3	Antisense	novelGene_ENSG00000223410.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	19	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCCTATACATGGGCTGAAA	-40271714	False	NA	NA	False	AAAAAG	-26	NA	40271739	40088972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_40089329_40245051_40245183_40271445
transcript_90468.known	chr20	+	3734	21	FSM	ENSG00000198900.7	ENST00000361337.3	3734	21	0	0	0	0	multi-exon	FALSE	canonical	3	192	junction_3	40.572897357719	314	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTAAGTGTCTGCCTCTTTG	41019765	True	NA	5	True	AATAAA	-21	NA	41028821	41124487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164_41081241_41084461_41084569_41092471_41092588_41097219_41097342_41098214_41098338_41100055_41100244_41101208_41101354_41112781_41112926_41113969_41114156_41115370_41115440_41116277_41116393_41118168_41118297_41121695_41121791_41122005_41122156_41123194
transcript_90472.known	chr20	+	5285	33	FSM	ENSG00000124181.15	ENST00000244007.7	5285	33	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	21.0831454825294	360	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGACTTGTATGCTCTTT	41133327	True	NA	17	True	AATAAA	-21	NA	41136959	41175721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_41137036_41137520_41137859_41159605_41159759_41159869_41159964_41160105_41160154_41162451_41162537_41162641_41162726_41162957_41162993_41163202_41163276_41163377_41163480_41163714_41163834_41163920_41164007_41164080_41164202_41164932_41165102_41165244_41165368_41165449_41165552_41165638_41165827_41166193_41166395_41166475_41166596_41166678_41166860_41167851_41167930_41168766_41168871_41169078_41169176_41169456_41169527_41170111_41170270_41172192_41172290_41172420_41172646_41172728_41172878_41173419_41173535_41173651_41173814_41173922_41174012_41174123_41174312_41174466
transcript_90476.nic	chr20	+	754	7	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-127	43104	-35	-43104	5prime_fragment	FALSE	canonical	3	192	junction_3	28.1523632321614	375	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	GAAGGAGAAGAAAAGAAAAC	41019730	True	NA	NA	False	ATTAAA	-15	NA	41028786	41081206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170_41076295_41077581_41077638_41080084_41080181_41081164
transcript_90479.nic	chr20	+	433	4	ISM	ENSG00000198900.7	ENST00000681058.1	8092	20	-93	48109	-1	-48109	5prime_fragment	FALSE	canonical	3	192	junction_3	7.36357401145817	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGAGAAGACCAAACA	41019764	True	NA	4	True	CATAAA	-22	NA	41028820	41076201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_41029101_41029430_41029456_41061393_41061491_41076170
transcript_90483.nic	chr20	-	1799	8	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-71	94726	-64	0	5prime_fragment	FALSE	canonical	3	40	junction_7	10.6022716087311	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTGTGTCTGTTTTCT	-41613594	True	NA	-3	True	AATAAA	-29	NA	41618448	41496808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_90486.nic	chr20	-	1172	7	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-71	96019	-64	-1293	5prime_fragment	FALSE	canonical	3	40	junction_6	11.1567119807864	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTATCTTCTACATCT	-41613594	True	NA	-4	True	AATAAA	-19	NA	41618448	41498101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_90496.nic	chr20	-	719	4	ISM	ENSG00000124177.16	ENST00000373233.8	10719	37	-71	112837	-64	0	5prime_fragment	FALSE	canonical	3	40	junction_3	8.04155872120988	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	-41613594	True	NA	NA	False	NA	NA	NA	41618448	41514919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_41514953_41533049_41533571_41551304_41551361_41618339
transcript_90499.known	chr20	-	599	3	FSM	ENSG00000124177.16	ENST00000482596.1	599	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	25.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	GAAGAAAGGAAAAAGGAAAA	-41613530	True	NA	NA	False	NA	NA	NA	41618384	41514919	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_41514953_41533049_41533571_41618339
transcript_90500.known	chr20	-	10719	37	FSM	ENSG00000124177.16	ENST00000373233.8	10719	37	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_27	15.3702002444846	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATTTGTATTTGAGGAATTC	-41613523	True	NA	NA	False	AAAAAG	-12	NA	41618377	41402082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_41405490_41412143_41412264_41413323_41413516_41415185_41415639_41416587_41416795_41417197_41417350_41420507_41422080_41423491_41423701_41425177_41425395_41426092_41426154_41437273_41437335_41439999_41440130_41445664_41445769_41447881_41447972_41450945_41451106_41451825_41452026_41452739_41452943_41454625_41454737_41455799_41455980_41457263_41457429_41473321_41473518_41483308_41483520_41484351_41484608_41487664_41487809_41488427_41488605_41489777_41490022_41491697_41491820_41493537_41493673_41493857_41493945_41497383_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049_41533571_41551304_41551361_41618339
transcript_90501.known	chr20	-	1349	6	FSM	ENSG00000124177.16	ENST00000470470.1	1349	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	7.41350119714026	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTTTGTGTCTGTTTTCT	-41533254	False	NA	-3	True	AATAAA	-29	NA	41533285	41496808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_41497502_41498167_41498227_41499294_41499358_41512845_41512996_41514804_41514953_41533049
transcript_90505.known	chr20	+	1680	7	FSM	ENSG00000124193.16	ENST00000483871.6	1680	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	25.8677190507569	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTGTTTTTTTTTTTTTTTTT	43442616	False	NA	NA	False	NA	NA	NA	43457927	43461334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459152_43459421_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_90509.known	chr20	+	1227	7	FSM	ENSG00000124193.16	ENST00000668808.1	1227	7	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_6	18.3121089264272	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	43442581	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702_43460853_43463343
transcript_90512.known	chr20	+	4353	6	FSM	ENSG00000124193.16	ENST00000244020.5	4353	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	4.28952211790544	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGAGCACCTAGTGTAGTAA	43442584	True	NA	104	True	AATAAA	-18	NA	43457895	43464243	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43460702
transcript_90515.known	chr20	+	1077	6	FSM	ENSG00000124193.16	ENST00000670741.1	1077	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	21.5369450015549	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTGTTTTGAGTTTATTG	43442581	True	NA	28	True	AATAAA	-18	NA	43457892	43463605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43463343
transcript_90516.known	chr20	+	1007	6	FSM	ENSG00000124193.16	ENST00000662078.1	1007	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.7191549138607	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCATTTGGCATAGTCACTCA	43442581	True	NA	NA	False	AGTAAA	-14	NA	43457892	43466046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43458141_43458360_43458510_43459770_43459896_43460032_43460242_43460514_43460599_43465854
transcript_90520.nnic	chr20	-	549	3	Antisense	novelGene_ENSG00000185513.17_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	2	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCCATGGGTATTTTCT	-43513977	False	NA	NA	False	AATAAA	-16	NA	43514020	43508606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_-_43508859_43509685_43509767_43513804
transcript_90522.known	chr20	-	588	1	FSM	ENSG00000282876.1	ENST00000635579.1	588	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	28	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCTTTCCACAATTTCTG	-43590553	True	NA	NA	False	ATTAAA	-16	NA	43590596	43590008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_43590000_43590600
transcript_90527.known	chr20	+	1754	14	FSM	ENSG00000101052.13	ENST00000373030.8	1754	14	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	27.9847803099128	673	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGTTGTAAATACTGTAC	43588336	True	NA	116	True	NA	NA	NA	43590936	43647299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43591055_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_90531.known	chr20	+	1599	14	FSM	ENSG00000101052.13	ENST00000373039.4	1599	14	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	55.9486239393791	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGAAACAGTCTTGATTTTTT	43588389	True	NA	39	True	ATTAAA	-32	NA	43590989	43647222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_43591030_43594692_43594818_43596434_43596523_43603759_43603890_43604182_43604259_43605001_43605074_43613849_43613977_43618939_43619027_43620856_43620926_43623890_43624046_43635925_43636014_43637144_43637254_43642478_43642625_43646935
transcript_9054.known	chr1	+	1934	4	FSM	ENSG00000116774.12	ENST00000369551.5	1934	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	199.486006192581	217	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972795	True	NA	19	True	ATTAAA	-18	NA	113979440	113982254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113979974_113980127_113980331_113980618_113980948
transcript_90558.known	chr20	-	2109	4	FSM	ENSG00000132823.11	ENST00000255174.3	2109	4	0	0	0	0	multi-exon	FALSE	canonical	3	370	junction_1	30.4667396060396	831	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGCTGGCTGTGGTTGAT	-44205565	True	NA	NA	False	AATACA	-20	NA	44210771	44195938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44197740_44202960_44203075_44206880_44206999_44210695
transcript_90559.known	chr20	+	1904	4	FSM	ENSG00000223891.7	ENST00000435163.5	1904	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	4.10960933531265	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAGACTCCATCTCAAAAAAA	44210384	True	NA	-40	True	NA	NA	NA	44211036	44225972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211357_44214887_44215004_44217366_44217683_44224820
transcript_90560.known	chr20	+	1559	3	FSM	ENSG00000223891.7	ENST00000660193.1	1559	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCTTTAGGAATTCATAAA	44210367	True	NA	NA	False	AAAACA	-41	NA	44211019	44218751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44214887_44215004_44217366
transcript_90561.known	chr20	+	1441	3	FSM	ENSG00000223891.7	ENST00000439943.5	1441	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210944	False	NA	15	True	AATAAA	-32	NA	44210959	44226027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44214887_44215004_44224820
transcript_90563.known	chr20	+	1627	3	FSM	ENSG00000223891.7	ENST00000655968.1	1627	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTGAGACTCCATCTCAAAA	44210342	True	NA	-43	True	NA	NA	NA	44210994	44225969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211357_44214887_44215004_44224820
transcript_90564.known	chr20	+	1366	2	FSM	ENSG00000223891.7	ENST00000671199.2	1378	2	0	12	0	-3	multi-exon	FALSE	canonical	3	13	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTGTATGATTTTGTTT	44210893	False	NA	3	True	AATAAA	-20	NA	44210906	44226015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211078_44224820
transcript_90565.known	chr20	+	1482	2	FSM	ENSG00000223891.7	ENST00000442383.1	1482	2	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTGTTTTCTGTTTCTATG	44210429	True	NA	15	True	AATAAA	-32	NA	44211081	44226027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44211357_44224820
transcript_90567.known	chr20	+	2645	6	FSM	ENSG00000124194.17	ENST00000617075.4	2645	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	12.9522198869537	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	44247087	True	NA	NA	False	ATTAAA	-40	NA	44247098	44280917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247203_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_90568.known	chr20	+	2855	6	FSM	ENSG00000124194.17	ENST00000537864.5	2855	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.9984614474175	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TTATTTTGCAATAAAAAAAA	44246482	True	NA	NA	False	ATTAAA	-40	NA	44247257	44280917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44258376_44258608_44263229_44263328_44264444_44264560_44278956
transcript_90570.known	chr20	+	2778	6	FSM	ENSG00000124194.17	ENST00000342560.10	2778	6	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	6.30555310817378	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGCACATCTTTTTTCATC	44246532	True	NA	NA	False	AATAAA	-16	NA	44247307	44280947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44258433_44258608_44263229_44263328_44264444_44264560_44278956
transcript_90573.known	chr20	+	880	5	FSM	ENSG00000124194.17	ENST00000438466.5	880	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	13.5922772190682	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCATGGGCTCCCTGGGTGGG	44246544	True	NA	-78	True	NA	NA	NA	44247319	44279235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44247515_44257152_44257346_44263229_44263328_44264444_44264560_44278956
transcript_90574.known	chr20	-	4628	2	FSM	ENSG00000197296.6	ENST00000396825.4	4628	2	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	0	79	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTCAGCATTTTGTGTGT	-44310559	True	NA	NA	False	ATTAAA	-25	NA	44311202	44302839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44307241_44310975
transcript_90575.known	chr20	-	279	1	FSM	ENSG00000226243.1	ENST00000412502.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	973	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACGCTCCTCTACTCTTTGAG	-44466827	False	NA	NA	False	NA	NA	NA	44466842	44466563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44466600_44466800
transcript_90576.known	chr20	+	926	5	FSM	ENSG00000124120.11	ENST00000456317.1	926	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_3	21.7413776012469	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACGCTGCTGCCCGAGGGCC	44475093	True	NA	NA	False	NA	NA	NA	44475919	44489453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484429_44486595_44486707_44489262
transcript_90577.known	chr20	+	6224	5	FSM	ENSG00000124120.11	ENST00000262605.9	6224	5	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	11.5217186218029	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGGTTCTTTTGTGATG	44475047	True	NA	30	True	AATAAA	-18	NA	44475873	44494603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44475992_44479984_44480445_44484336_44484531_44486595_44486707_44489262
transcript_90580.known	chr20	-	4396	10	FSM	ENSG00000132824.14	ENST00000342374.5	4396	10	0	0	0	0	multi-exon	FALSE	canonical	3	330	junction_7	34.5728788303387	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGATAACTGATATTAATTTG	-44517662	True	NA	-11	True	AATAAA	-41	NA	44522070	44497440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_90581.known	chr20	-	1726	11	FSM	ENSG00000132824.14	ENST00000255175.5	1726	11	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	114.657926023455	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGCCTGTAAGGTGGTGA	-44517677	True	NA	-7	True	ATTAAA	-13	NA	44522085	44496223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44496356_44500257_44500435_44501072_44501301_44503814_44503996_44504800_44504892_44506826_44506997_44509890_44510029_44511288_44511369_44512800_44512995_44513878_44514041_44521912
transcript_90583.known	chr20	-	1496	12	FSM	ENSG00000196839.13	ENST00000372874.9	1496	12	0	0	0	0	multi-exon	TRUE	canonical	3	227	junction_3	22.6208417027051	1273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAGGTGGCATGTAATTTGG	-44649818	True	NA	-5	True	AATAAA	-25	NA	44651699	44619521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_90585.known	chr20	-	1128	11	FSM	ENSG00000196839.13	ENST00000537820.1	1128	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	77.1748663750058	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	-44649810	True	NA	NA	False	NA	NA	NA	44651691	44619809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_90586.known	chr20	-	1356	11	FSM	ENSG00000196839.13	ENST00000536532.5	1356	11	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	77.7699170630907	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAACTTGTACTGAAAATCT	-44649800	True	NA	-62	True	NA	NA	NA	44651681	44619578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622828_44622931_44623006_44623079_44624201_44624330_44625568_44625685_44626455_44626600_44629046_44629170_44636226_44636289_44651574
transcript_90589.known	chr20	-	812	9	FSM	ENSG00000196839.13	ENST00000539235.5	812	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	89.5222563109309	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGTGGAGTCACCCCAAC	-44649810	True	NA	NA	False	NA	NA	NA	44651691	44619809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44619848_44620298_44620402_44621017_44621148_44622587_44622653_44622828_44622931_44623006_44623079_44629046_44629170_44636226_44636289_44651574
transcript_90591.known	chr20	+	1443	6	FSM	ENSG00000168734.14	ENST00000372891.7	1443	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	183.597821337836	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44531979_44582584_44582732_44585099_44585205_44589796_44589867_44614533_44614708_44618284
transcript_90592.known	chr20	+	1338	5	FSM	ENSG00000168734.14	ENST00000372892.7	1338	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	159.058754867502	294	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44531979_44582584_44582732_44589796_44589867_44614533_44614708_44618284
transcript_90594.known	chr20	+	1191	4	FSM	ENSG00000168734.14	ENST00000372894.7	1191	4	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_1	67.2755527662166	554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTTTAAGATTATTTCTC	NA	False	NA	19	True	AATAAA	-19	NA	44531784	44619037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44531979_44589796_44589867_44614533_44614708_44618284
transcript_90599.known	chr20	-	452	3	FSM	ENSG00000244558.6	ENST00000445420.5	452	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCCACTATAATAGTCTGGT	-44745982	False	NA	NA	False	NA	NA	NA	44745995	44695201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44695508_44738819_44738935_44745964
transcript_90600.known	chr20	-	862	3	FSM	ENSG00000244558.6	ENST00000427598.5	862	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATATGTCCTTGGACTTC	-44738854	False	NA	NA	False	ATTAAA	-23	NA	44738896	44694891	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44695508_44716624_44716794_44738819
transcript_90602.known	chr20	-	514	2	FSM	ENSG00000244558.6	ENST00000419931.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTGAGTTTTGGCTTTC	NA	False	NA	-7	True	NA	NA	NA	44696084	44695075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44695508_44696002
transcript_90607.known	chr20	+	3109	7	FSM	ENSG00000166913.13	ENST00000372839.7	3109	7	0	0	0	0	multi-exon	FALSE	canonical	3	258	junction_1	1027.44034701128	3477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857674	True	NA	30	True	AATAAA	-27	NA	44885710	44908532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44885887_44887647_44887743_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_90609.known	chr20	+	1097	7	FSM	ENSG00000166913.13	ENST00000479421.5	1097	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	1129.9498022282	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAAAGAGAATCGTACGT	44857665	True	NA	34	True	GATAAA	-14	NA	44885701	44906520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44885887_44901530_44901834_44903035_44903122_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_90612.known	chr20	+	3020	6	FSM	ENSG00000166913.13	ENST00000353703.9	3020	6	0	0	0	0	multi-exon	FALSE	canonical	3	2080	junction_1	206.28233079932	5477	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGATGTGTCACCACCATCT	44857668	True	NA	30	True	AATAAA	-27	NA	44885704	44908532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44885887_44901530_44901834_44903992_44904117_44904967_44905132_44906000_44906097_44906381
transcript_90624.known	chr20	+	2126	15	FSM	ENSG00000101104.13	ENST00000255136.8	2126	15	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_9	29.8157607958733	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTGCCTCCCAGGAGGCCC	44907059	True	NA	14	True	ATTAAA	-17	NA	44910059	44939316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930459_44930727_44932341_44932433_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_90628.known	chr20	+	1910	14	FSM	ENSG00000101104.13	ENST00000537323.5	1910	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	25.0523711806916	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTTGCCTCCCAGGAGG	44907123	True	NA	11	True	ATTAAA	-14	NA	44910123	44939313	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44910337_44912659_44912854_44916755_44916872_44918905_44919046_44919182_44919278_44921593_44921732_44924160_44924257_44930517_44930727_44933071_44933186_44935390_44935498_44936636_44936731_44938060_44938192_44938673_44938749_44939125
transcript_90641.known	chr20	-	1973	7	FSM	ENSG00000025772.8	ENST00000372813.4	1973	7	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_3	27.3231688417642	548	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCATTTGTTGAACAAATTT	-44957400	True	NA	-3	True	AATAAA	-24	NA	44960397	44942129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_44943214_44943452_44943580_44948729_44948878_44951832_44952003_44955067_44955221_44956385_44956486_44960206
transcript_90646.known	chr20	+	6366	11	FSM	ENSG00000101109.12	ENST00000372806.8	6366	11	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_8	15.1937487145207	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCAGTGGTGTGTTTATTCT	44961882	True	NA	58	True	AATATA	-43	NA	44966511	45080021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_90648.nic	chr20	+	1332	10	ISM	ENSG00000101109.12	ENST00000372801.5	2038	12	-74	50572	-31	29779	5prime_fragment	FALSE	canonical	3	106	junction_8	15.734682930189	394	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAAAACCAGATCAACAGCT	44961818	True	NA	NA	False	AAAAAG	-5	NA	44966447	45025036	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44987131_44987297_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972
transcript_9065.known	chr1	+	1961	3	FSM	ENSG00000116774.12	ENST00000393300.6	1961	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	217	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972745	True	NA	19	True	ATTAAA	-18	NA	113979390	113982254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113980202_113980618_113980948
transcript_90658.known	chr20	+	932	2	FSM	ENSG00000101109.12	ENST00000488618.1	932	2	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_1	0	239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTCCTACCTCTCTCTG	44961885	True	NA	NA	False	AATAAA	-13	NA	44966514	44972920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44966604_44972077
transcript_90659.known	chr20	+	6161	10	FSM	ENSG00000101109.12	ENST00000499879.6	6161	10	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	42.1341186049653	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAAACCCTTATTAACGAGA	44961849	True	NA	15	True	AATAAA	-15	NA	44966478	45079948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_44966604_44972077_44972159_44978442_44978572_44981828_44981944_44995089_44995258_44997168_44997307_45000391_45000521_45001166_45001354_45024972_45025131_45075017
transcript_90661.known	chr20	+	1622	3	FSM	ENSG00000124233.12	ENST00000372781.4	1622	3	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	1.5	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTTTTGACTCCTGTTT	45206649	True	NA	6	True	AATAAA	-20	NA	45207032	45209768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45207130_45207373_45208731_45209600
transcript_90662.known	chr20	-	596	4	FSM	ENSG00000124107.5	ENST00000338380.2	596	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCCTGCTTCTGTGATTCG	NA	False	NA	NA	False	AATAAA	-25	NA	45254564	45252238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45252420_45253001_45253152_45253574_45253734_45254458
transcript_90664.nic	chr20	+	782	2	ISM	ENSG00000124232.11	ENST00000372741.7	1636	12	4939	4122	-2245	-4122	internal_fragment	FALSE	canonical	1	3	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAAAAAGAAAAAGAAAA	45311743	True	NA	NA	False	NA	NA	NA	45311789	45312837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_45311955_45312220
transcript_90666.known	chr20	-	2613	5	FSM	ENSG00000124145.6	ENST00000372733.3	2613	5	0	0	0	0	multi-exon	FALSE	canonical	3	165	junction_2	5.1720402163943	417	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTGCCTCTGTCATTTT	-45345608	True	NA	-4	True	AATAAA	-18	NA	45348424	45325287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45327416_45330365_45330565_45333022_45333070_45335781_45335921_45348324
transcript_90672.known	chr20	+	1313	6	FSM	ENSG00000254806.5	ENST00000419593.5	1313	6	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_3	164.440141084834	337	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45361078	True	NA	NA	False	AATAAA	-22	NA	45363199	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45408459_45408607_45408800_45408939_45409931
transcript_90673.known	chr20	+	941	4	FSM	ENSG00000204070.10	ENST00000457307.1	941	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	44.0782133132559	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TTAAGAGAGAAAAAAAATCA	45361108	True	NA	-22	True	NA	NA	NA	45363229	45367424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45363528_45363694_45365546_45365687_45366874
transcript_90674.known	chr20	+	2728	4	FSM	ENSG00000204070.10	ENST00000243918.10	2728	4	0	0	0	0	multi-exon	TRUE	canonical	3	93	junction_3	10.1434160364686	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGTGTCCAGCAGTGTGGG	45361034	True	NA	17	True	AATAAA	-22	NA	45363155	45369209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45363316_45363528_45363694_45365618_45365687_45366874
transcript_90678.nnic	chr20	+	1054	4	NNC	ENSG00000244274.9	novel	1132	3	NA	NA	-128	0	at_least_one_novel_splicesite	FALSE	canonical	2	10	junction_1	183.561675980824	382	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	45405918	False	NA	NA	False	AATAAA	-19	NA	45405928	45410607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_45406022_45408459_45408607_45408800_45408939_45409931
transcript_90680.known	chr20	+	1118	4	FSM	ENSG00000244274.9	ENST00000372723.7	1118	4	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	171.821612920688	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405552	False	NA	NA	False	AATAAA	-22	NA	45406056	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45408939_45409931
transcript_90681.known	chr20	+	1202	4	FSM	ENSG00000244274.9	ENST00000372722.7	1202	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	180.787782281387	169	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405566	False	NA	NA	False	AATAAA	-22	NA	45406070	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406211_45408459_45408607_45408800_45409037_45409931
transcript_90682.nnic	chr20	+	1130	4	NNC	ENSG00000244274.9	novel	1118	4	NA	NA	-90	0	at_least_one_novel_splicesite	FALSE	canonical	1	6	junction_1	185.440616430765	363	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATTCGACTTCATTTTTCA	45405900	True	NA	NA	False	AATAAA	-19	NA	45405966	45410607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_45406136_45408459_45408607_45408800_45408939_45409931
transcript_90686.known	chr20	+	1036	4	FSM	ENSG00000244274.9	ENST00000357275.6	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	182.622257375406	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45405961	False	NA	NA	False	AATAAA	-22	NA	45406183	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406256_45408459_45408607_45408800_45408939_45409931
transcript_90688.known	chr20	+	1078	4	FSM	ENSG00000244274.9	ENST00000360981.8	1078	4	0	0	0	0	multi-exon	FALSE	canonical	3	335	junction_1	33.5062183283442	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403258	True	NA	NA	False	AATAAA	-22	NA	45406618	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45408939_45409931
transcript_90689.known	chr20	+	1207	4	FSM	ENSG00000244274.9	ENST00000372717.5	1207	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	165.582473576027	175	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45403227	True	NA	NA	False	AATAAA	-22	NA	45406587	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45406733_45408459_45408607_45408800_45409037_45409931
transcript_90690.known	chr20	+	1537	4	FSM	ENSG00000244274.9	ENST00000372712.6	1537	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	180.743526086613	316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGACTTCATTTTTCATAT	45407192	False	NA	NA	False	AATAAA	-22	NA	45407206	45410610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45407780_45408459_45408607_45408800_45408939_45409931
transcript_90697.known	chr20	+	2187	12	FSM	ENSG00000124155.19	ENST00000640986.1	2187	12	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_7	155.893585234786	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTTCTTTGCCTCTTGTCCT	45408066	True	NA	14	True	AATAAA	-16	NA	45416140	45426240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420507_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90698.known	chr20	+	2091	12	FSM	ENSG00000124155.19	ENST00000638978.1	2091	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	159.197315065195	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGATGGAGTTTACTGTTTG	45408048	True	NA	-30	True	NA	NA	NA	45416122	45426196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421534_45424215_45424382_45424495_45424580_45425573
transcript_90699.known	chr20	+	2112	12	FSM	ENSG00000124155.19	ENST00000640272.1	2112	12	0	0	0	0	multi-exon	FALSE	canonical	1	17	junction_4	152.711903988637	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45408066	True	NA	-37	True	NA	NA	NA	45416140	45426189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90701.known	chr20	+	2037	11	FSM	ENSG00000124155.19	ENST00000543458.7	2037	11	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	164.178439510187	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCCTCTTGTCCTTGAG	45408032	True	NA	18	True	AATAAA	-20	NA	45416106	45426244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416655_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90703.known	chr20	+	1971	11	FSM	ENSG00000124155.19	ENST00000372689.9	1971	11	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_8	156.151336849865	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCTTTGCCTCTTGTCCTT	45408062	True	NA	15	True	AATAAA	-17	NA	45416136	45426241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45418851_45418980_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45424215_45424382_45424495_45424580_45425573
transcript_90704.known	chr20	+	1807	11	FSM	ENSG00000124155.19	ENST00000455050.2	1807	11	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	213.927113756064	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACGAGCCAAATGTGGC	45408066	True	NA	NA	False	NA	NA	NA	45416140	45425977	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419472_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90706.known	chr20	+	2032	11	FSM	ENSG00000124155.19	ENST00000638246.1	2032	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	161.811742466361	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45408022	True	NA	-37	True	NA	NA	NA	45416096	45426189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90711.known	chr20	+	1880	10	FSM	ENSG00000124155.19	ENST00000279035.14	1880	10	0	0	0	0	multi-exon	TRUE	canonical	3	33	junction_1	165.121803153137	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45416069	False	NA	-24	True	NA	NA	NA	45416083	45426202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45419294_45419396_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90712.known	chr20	+	1886	10	FSM	ENSG00000124155.19	ENST00000638714.1	1886	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	173.402550282412	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTAGTGGATGGAGTTTA	45408067	True	NA	-37	True	NA	NA	NA	45416141	45426189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45416516_45416695_45419503_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90715.known	chr20	+	1158	7	FSM	ENSG00000124155.19	ENST00000545755.3	1158	7	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	204.674334818348	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGCCCTTTCCAGCAGC	45408079	True	NA	NA	False	NA	NA	NA	45416153	45425826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90719.known	chr20	+	1715	9	FSM	ENSG00000124155.19	ENST00000640210.1	1715	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	183.537419549802	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTTTACTGTTTGTGGAAT	45408069	True	NA	-24	True	NA	NA	NA	45416143	45426202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45416344_45419507_45419591_45420135_45420224_45420331_45420430_45420527_45420694_45421382_45421584_45424215_45424382_45424495_45424580_45425573
transcript_90720.known	chr20	+	692	5	FSM	ENSG00000101443.18	ENST00000447118.5	692	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	159.717524085493	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACGTTCTGTCTCTGTCTCCC	45464763	False	NA	16	True	AATAAA	-16	NA	45469755	45481531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45469861_45470388_45470533_45471152_45471282_45479941_45480095_45481370
transcript_90732.known	chr20	+	567	4	FSM	ENSG00000101443.18	ENST00000372676.8	567	4	0	0	0	0	multi-exon	TRUE	canonical	3	260	junction_1	58.2885542414251	6749	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464760	True	NA	17	True	AATAAA	-17	NA	45469752	45481532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45469861_45470388_45470533_45479941_45480095_45481370
transcript_90739.known	chr20	+	420	3	FSM	ENSG00000101443.18	ENST00000339946.7	420	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	193.5	181	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45464763	False	NA	17	True	AATAAA	-17	NA	45469755	45481532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45469861_45479941_45480095_45481370
transcript_90740.known	chr20	+	460	3	FSM	ENSG00000101443.18	ENST00000462062.5	460	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	183.5	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CGTTCTGTCTCTGTCTCCCC	45471254	False	NA	17	True	AATAAA	-17	NA	45471272	45481532	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45471418_45479941_45480095_45481370
transcript_90742.known	chr20	-	1964	4	FSM	ENSG00000101448.14	ENST00000354280.9	1964	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_3	0.816496580927726	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTCTGTTCATGTCCTTTG	NA	False	NA	NA	False	CATAAA	-17	NA	45547401	45540625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45542155_45542699_45542868_45545638_45545771_45547266
transcript_90744.known	chr20	-	1217	3	FSM	ENSG00000101448.14	ENST00000336443.3	1217	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	0.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCCTTGAGGCTGAGT	NA	False	NA	-7	True	AGTAAA	-15	NA	45546377	45541844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45542155_45542699_45542868_45545638
transcript_90745.known	chr20	-	607	3	FSM	ENSG00000243543.9	ENST00000372670.8	607	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTCCGAGGCTGAATAAT	-45539471	False	NA	NA	False	AATAAA	-19	NA	45539482	45534195	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45534506_45537963_45538095_45539316
transcript_90746.known	chr20	+	493	2	FSM	ENSG00000180305.5	ENST00000372643.4	493	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACCTCTTTTGCTGCCA	NA	False	NA	NA	False	AATAAA	-21	NA	45629738	45631196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45629905_45630869
transcript_90754.nnic	chr20	+	776	4	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	11.4309521329882	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCATCAGCACCAC	45759477	True	NA	NA	False	TTTAAA	-10	NA	45759619	45765272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_45759900_45760029_45760232_45762148_45762328_45765157
transcript_90757.nnic	chr20	+	597	3	Antisense	novelGene_ENSG00000124116.19_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	12	junction_1	7.5	76	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCAGCATCAGCACCAC	45759454	True	NA	NA	False	TTTAAA	-10	NA	45759596	45765272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_45759900_45762148_45762328_45765157
transcript_90764.known	chr20	+	1264	13	FSM	ENSG00000101457.13	ENST00000372622.8	1264	13	0	0	0	0	multi-exon	FALSE	canonical	3	341	junction_6	33.3687312048604	2167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGGTGAACCTGCTGTGCC	45788207	True	NA	12	True	ATTAAA	-19	NA	45791953	45811418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_90769.known	chr20	+	1073	12	FSM	ENSG00000101457.13	ENST00000456939.5	1073	12	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	108.144760650705	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGCTGTGCCCTCTACCTT	45788308	True	NA	21	True	ATTAAA	-28	NA	45792054	45811427	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45801073_45801143_45801401_45801459_45801998_45802058_45803332_45803379_45805145_45805205_45805305_45805367_45809113_45809186_45810884_45810941_45811056
transcript_90776.known	chr20	+	473	5	FSM	ENSG00000101457.13	ENST00000449078.5	473	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	159.546819147233	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTCCCAAGATAGTAGAGAA	45788273	True	NA	NA	False	TATAAA	-6	NA	45792019	45796573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45792110_45792676_45792748_45793920_45794018_45795344_45795444_45796457
transcript_90788.known	chr20	+	914	6	FSM	ENSG00000175063.17	ENST00000372568.4	914	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	1403.71370300357	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45812878	True	NA	38	True	AATAAA	-26	NA	45813005	45816957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45813291_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_9079.known	chr1	+	2119	1	FSM	ENSG00000282048.1	ENST00000632517.1	2119	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	948	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGTGGACTCACCTGGAA	114029064	True	NA	27	True	AATAAA	-16	NA	114032392	114034511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_114032400_114034500
transcript_90793.known	chr20	+	777	6	FSM	ENSG00000175063.17	ENST00000356455.9	777	6	0	0	0	0	multi-exon	FALSE	canonical	3	3264	junction_1	158.182679203508	9916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACAAGTTGTTGCGTTGTAA	45746818	True	NA	33	True	AATAAA	-21	NA	45812643	45816952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815540_45815746_45815853_45815914_45816708
transcript_90794.known	chr20	+	641	5	FSM	ENSG00000175063.17	ENST00000405520.5	641	5	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_3	1493.19238546143	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	45812543	False	NA	34	True	AATAAA	-22	NA	45812575	45816953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815853_45815914_45816708
transcript_90795.known	chr20	+	737	6	FSM	ENSG00000175063.17	ENST00000335046.7	737	6	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_4	1693.06933112617	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746809	True	NA	38	True	AATAAA	-26	NA	45812634	45816957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45814383_45814471_45815389_45815541_45815853_45815914_45816708
transcript_90796.known	chr20	+	665	5	FSM	ENSG00000175063.17	ENST00000352551.9	665	5	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	1467.7753574713	818	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746848	True	NA	38	True	AATAAA	-26	NA	45812673	45816957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45815540_45815746_45815853_45815914_45816708
transcript_90797.known	chr20	+	476	4	FSM	ENSG00000175063.17	ENST00000243893.10	476	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	1651.48424825132	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGTTGCGTTGTAATTTCA	45746832	True	NA	38	True	AATAAA	-26	NA	45812657	45816957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45815853_45815914_45816708
transcript_90798.known	chr20	+	705	5	FSM	ENSG00000175063.17	ENST00000617055.4	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1748.49692593381	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAGTTGTTGCGTTGTAAT	45812543	False	NA	34	True	AATAAA	-22	NA	45812575	45816953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45812797_45813436_45813465_45815389_45815541_45815853_45815914_45816708
transcript_90799.known	chr20	-	780	7	FSM	ENSG00000101470.10	ENST00000372557.1	780	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	64.8496123521353	481	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45833723	False	22	-1	True	AATAAA	-17	NA	45833745	45823213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45833250_45833329_45833657
transcript_9080.known	chr1	+	1748	3	FSM	ENSG00000116774.12	ENST00000320334.5	1748	3	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	23.5	1373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTCCTGTGTTTGTTTGG	113972828	True	NA	18	True	ATTAAA	-17	NA	113979473	113982253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113980331_113980618_113980948
transcript_90801.known	chr20	-	681	6	FSM	ENSG00000101470.10	ENST00000372555.8	681	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	67.4091981854109	569	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45827242	True	NA	-1	True	AATAAA	-17	NA	45827312	45823213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782_45824835_45827245
transcript_90802.nic	chr20	-	747	5	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2345	0	2345	0	3prime_fragment	FALSE	canonical	2	3	junction_4	69.7652313118791	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45824945	False	NA	-1	True	AATAAA	-17	NA	45824967	45823213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_45823380_45823990_45824128_45824291_45824407_45824494_45824639_45824782
transcript_90803.nic	chr20	-	692	2	ISM	ENSG00000101470.10	ENST00000372555.8	681	6	2796	0	2796	0	intron_retention	FALSE	canonical	3	180	junction_1	0	933	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGTGGCCTGAATGAGGGG	-45824494	False	NA	-1	True	AATAAA	-17	NA	45824516	45823213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_45823380_45823990
transcript_90806.known	chr20	-	1013	5	FSM	ENSG00000101473.17	ENST00000488679.5	1013	5	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	139.811256699881	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACTGATACCACTGGAGTG	-45850156	True	NA	-18	True	AATAAA	-2	NA	45857402	45841737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45857187
transcript_9081.known	chr1	+	2063	2	FSM	ENSG00000116774.12	ENST00000491700.1	2063	2	0	0	0	0	multi-exon	FALSE	canonical	3	387	junction_1	0	204	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTGTGTTTGTTTGGG	113972845	True	NA	19	True	ATTAAA	-18	NA	113979490	113982254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_113979631_113980331
transcript_90813.known	chr20	+	3106	3	FSM	ENSG00000124104.19	ENST00000344780.4	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	13	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGGGACTAGAACTGGGT	45833001	True	NA	NA	False	AATACA	-16	NA	45834150	45843275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45834469_45834958_45835110_45840638
transcript_90814.known	chr20	+	1824	3	FSM	ENSG00000124104.19	ENST00000372542.5	1824	3	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	14.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCTCTTTATTGGATGT	45833150	False	NA	9	True	ATTAAA	-21	NA	45833894	45841730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45834469_45834958_45835117_45840638
transcript_90817.known	chr20	-	1154	6	FSM	ENSG00000101473.17	ENST00000217455.9	1154	6	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_2	29.7684396635094	1515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCTGGCTTTTAATTCCC	-45850146	True	NA	-1	True	AATAAA	-19	NA	45857392	45841720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45841957_45843526_45843722_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_90818.known	chr20	-	1197	6	FSM	ENSG00000101473.17	ENST00000461272.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	145.099414195923	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGAGTGGCTGGCTTTTAA	-45850143	True	NA	-6	True	AATAAA	-14	NA	45857389	45841725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45841957_45843526_45843773_45844262_45844421_45848449_45848676_45855158_45855293_45857187
transcript_90819.known	chr20	-	814	3	FSM	ENSG00000101473.17	ENST00000426915.1	814	3	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	203.5	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCATAGTTGTGTGCATTAT	-45850063	False	NA	-3	True	ATTAAA	-16	NA	45857309	45853421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45853980_45855158_45855293_45857187
transcript_90820.nnic	chr20	+	475	2	NNC	ENSG00000132801.7	novel	2776	2	NA	NA	0	-20815	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCTTCATCAGTCTCCTC	45857015	True	NA	NA	False	CATAAA	-25	NA	45857613	45858307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_45857981_45858199
transcript_90821.known	chr20	+	2776	2	FSM	ENSG00000132801.7	ENST00000255152.3	2776	2	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGGAAATGTGTTCTGCT	45857015	True	NA	NA	False	AATAAA	-7	NA	45857613	45879122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45857981_45876713
transcript_90826.known	chr20	+	2769	2	FSM	ENSG00000168612.5	ENST00000372523.1	2769	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACTTGTCTAGTTTTTTTT	45880308	True	NA	29	True	AATAAA	-21	NA	45881226	45885266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45881262_45882532
transcript_90833.known	chr20	+	1858	15	FSM	ENSG00000064601.21	ENST00000646241.3	1858	15	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	24.5985108226876	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888834	True	NA	21	True	ATTAAA	-18	NA	45891334	45898820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_90834.known	chr20	+	1898	15	FSM	ENSG00000064601.21	ENST00000191018.9	1898	15	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	74.957300770342	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888840	True	NA	21	True	ATTAAA	-18	NA	45891340	45898820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891426_45891568_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_90839.known	chr20	+	1820	14	FSM	ENSG00000064601.21	ENST00000354880.9	1820	14	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	78.0527814135443	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888821	True	NA	21	True	ATTAAA	-18	NA	45891321	45898820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891380_45891568_45891763_45891915_45892028_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_90840.known	chr20	-	1530	14	FSM	ENSG00000100979.15	ENST00000372420.5	1530	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	131.681164158291	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTGGGCTGTCCTGAG	-45910917	False	NA	-18	True	NA	NA	NA	45910937	45898759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45910870
transcript_90842.known	chr20	-	1199	2	FSM	ENSG00000124257.7	ENST00000372518.5	1199	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTGGAAGGTCTCCTTGC	-45890926	True	NA	-24	True	AATAAA	-22	NA	45891208	45888633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45888874_45890249
transcript_90843.known	chr20	-	490	2	FSM	ENSG00000124257.7	ENST00000545238.1	490	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCCTTGCCCCTACAGC	-45890435	False	NA	-15	True	AATAAA	-31	NA	45890476	45888624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45888888_45890249
transcript_90844.known	chr20	-	1889	16	FSM	ENSG00000100979.15	ENST00000372431.8	1889	16	0	0	0	0	multi-exon	FALSE	canonical	3	395	junction_12	44.9287831524019	1202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTCTATGGGAGACCCT	-45898183	True	NA	-15	True	AATAAA	-18	NA	45912155	45898621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909515_45909672_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_90845.known	chr20	-	1731	15	FSM	ENSG00000100979.15	ENST00000354050.8	1731	15	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_11	124.006768248465	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGTCTATGGGAGACCCTG	-45898180	True	NA	-14	True	AATAAA	-19	NA	45912152	45898620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45909941_45910071_45911151_45911252_45911352_45911464_45912078
transcript_90846.known	chr20	-	1420	14	FSM	ENSG00000100979.15	ENST00000420868.2	1420	14	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_11	127.896962966658	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTTAATTCCATAATCAAT	-45898183	True	NA	-64	True	NA	NA	NA	45912155	45898805	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_45899064_45899461_45899539_45899621_45899686_45899835_45899879_45902266_45902335_45902439_45902605_45904799_45904860_45904941_45905119_45906267_45906360_45907691_45907756_45907840_45907905_45911151_45911252_45911352_45911464_45912078
transcript_90847.known	chr20	+	1996	14	FSM	ENSG00000064601.21	ENST00000372459.7	1996	14	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_10	21.013379789494	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCGTCTTCTCTGTGGCAC	45888885	True	NA	21	True	ATTAAA	-18	NA	45891385	45898820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45891763_45891915_45892028_45892272_45892324_45892397_45892485_45892724_45892881_45893219_45893312_45893987_45894073_45894649_45894742_45894822_45894902_45894993_45895134_45896964_45897041_45897716_45897807_45898004_45898110_45898366
transcript_90852.known	chr20	+	2689	17	FSM	ENSG00000100982.12	ENST00000372409.8	2689	17	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_4	57.4668382634716	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGTGTGAGGGTCTTGAG	45928708	True	NA	9	True	AATACA	-14	NA	45934682	45948020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45934805_45937417_45937586_45938980_45939124_45939214_45939340_45940474_45940613_45940808_45940940_45941052_45941208_45943096_45943245_45943339_45943424_45943665_45943766_45944867_45945031_45945710_45945884_45946028_45946116_45946199_45946385_45947072_45947167_45947262_45947439_45947523
transcript_90853.known	chr20	+	627	2	FSM	ENSG00000100982.12	ENST00000616084.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	551	junction_1	0	552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGTTTAAGCCTGCCTT	45928758	True	NA	115	True	GATAAA	-21	NA	45934732	45937972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_45934805_45937417
transcript_90855.known	chr20	+	2336	13	FSM	ENSG00000100985.7	ENST00000372330.3	2336	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	17.7738493923579	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46008521	True	NA	21	True	AATAAA	-21	NA	46008907	46016561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46009065_46009865_46010099_46010482_46010632_46010921_46011051_46011142_46011317_46011573_46011748_46012136_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_90856.nic	chr20	+	1521	7	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	3028	0	3028	0	3prime_fragment	FALSE	canonical	3	38	junction_1	14.4385671803757	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46011758	True	NA	21	True	AATAAA	-21	NA	46011935	46016561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_46012314_46012426_46012583_46013254_46013535_46013656_46013797_46014123_46014275_46014370_46014475_46016249
transcript_90857.nic	chr20	+	784	4	ISM	ENSG00000100985.7	ENST00000372330.3	2336	13	4672	0	4672	0	3prime_fragment	FALSE	canonical	3	47	junction_1	13.1402688962847	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46013402	False	NA	21	True	AATAAA	-21	NA	46013579	46016561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_46013797_46014123_46014275_46014370_46014475_46016249
transcript_90861.nic	chr20	+	1057	3	NIC	ENSG00000100985.7	novel	2336	13	NA	NA	4726	0	intron_retention	FALSE	canonical	3	70	junction_1	4	281	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGCAGACTTTATTTATAT	46013560	True	NA	21	True	AATAAA	-21	NA	46013633	46016561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_46014275_46014370_46014475_46016249
transcript_90863.nnic	chr20	+	705	3	NNC	ENSG00000124140.15	novel	617	3	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021255	False	NA	4	True	AATAAA	-15	NA	46021598	46023581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_46021887_46022867_46023072_46023368
transcript_90864.known	chr20	+	411	3	FSM	ENSG00000124140.15	ENST00000413737.2	411	3	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	6	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCTTTCCTCATTTGCTT	46021356	False	NA	12	True	AATAAA	-23	NA	46021838	46023589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46021887_46022929_46023072_46023368
transcript_90865.nnic	chr20	+	629	3	NNC	ENSG00000124140.15	novel	617	3	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	7.5	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021170	True	NA	4	True	AATAAA	-15	NA	46021652	46023581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_46021887_46022889_46023072_46023368
transcript_90866.known	chr20	+	617	3	FSM	ENSG00000124140.15	ENST00000626701.1	617	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	8.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021229	True	NA	4	True	AATAAA	-15	NA	46021711	46023581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46021887_46022842_46023072_46023368
transcript_90867.known	chr20	+	401	2	FSM	ENSG00000124140.15	ENST00000628272.1	401	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCATTCTCTTTCCTC	46021216	True	NA	4	True	AATAAA	-15	NA	46021698	46023581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46021887_46023368
transcript_90868.known	chr20	-	491	2	FSM	ENSG00000204044.6	ENST00000419897.1	491	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAACATCTACTGAAGGT	-46021548	False	NA	NA	False	NA	NA	NA	46021727	46020618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46020906_46021523
transcript_90869.known	chr20	-	3224	8	FSM	ENSG00000124160.12	ENST00000290231.11	3224	8	0	0	0	0	multi-exon	TRUE	canonical	3	88	junction_1	16.8644052152842	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAAAGCTTTGTTCATCTT	-46087930	True	NA	-21	True	AATAAA	-35	NA	46089962	46060990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46062890_46063359_46063681_46065028_46065229_46067054_46067182_46068501_46068639_46070209_46070537_46079386_46079454_46089816
transcript_90873.known	chr20	+	1682	9	FSM	ENSG00000101017.14	ENST00000372285.8	1682	9	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_7	13.114877048604	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAAACGGGGGTGAACATG	46116507	True	NA	NA	False	ATTAAA	-22	NA	46118313	46129858	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_90884.known	chr20	+	1623	8	FSM	ENSG00000101017.14	ENST00000372276.7	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	50.7253509055363	170	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGGGGGTGAACATGCTGGG	46116509	True	NA	NA	False	ATTAAA	-27	NA	46118315	46129863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46123125_46123220_46128137_46128225_46128329_46128359_46128881
transcript_90887.known	chr20	+	822	8	FSM	ENSG00000101017.14	ENST00000466205.5	822	8	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	50.4688224631438	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGGGCTGGCACTGACTG	46116541	True	NA	NA	False	NA	NA	NA	46118347	46129126	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46126639_46126702_46128137_46128225_46128329_46128359_46128881
transcript_9090.known	chr1	-	1897	8	FSM	ENSG00000134207.17	ENST00000610096.1	1897	8	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_7	134.614187929195	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114152327	True	NA	16	True	NA	NA	NA	114153850	114091764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114153609
transcript_90901.nnic	chr20	+	1401	7	NIC	ENSG00000101017.14	novel	1522	7	NA	NA	-38	0	combination_of_known_splicesites	FALSE	canonical	3	10	junction_4	53.3510387277824	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	46116433	True	NA	19	True	TATAAA	-22	NA	46118239	46129659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46128137_46128225_46128329_46128359_46128881
transcript_90910.known	chr20	+	1522	7	FSM	ENSG00000101017.14	ENST00000620709.4	1522	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	56.9814784722974	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATAACAAGGGTTCTGGAA	46116471	True	NA	19	True	TATAAA	-22	NA	46118277	46129659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46118395_46121819_46121899_46122232_46122359_46122609_46122757_46127978_46128225_46128329_46128359_46128881
transcript_90918.known	chr20	-	2175	11	FSM	ENSG00000080189.15	ENST00000317734.12	2175	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	81.5082817878036	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCCTTTTAACAACTAAGA	-46360440	True	NA	NA	False	ATTAAA	-22	NA	46364458	46349529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358559_46358690_46358764_46364370
transcript_90925.known	chr20	-	5740	10	FSM	ENSG00000080189.15	ENST00000543605.5	5740	10	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	74.0056721216208	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTAGGGCTTTTTATT	-46360386	True	NA	2	True	ATTAAA	-24	NA	46364404	46345979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355179_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_90927.nic	chr20	-	2044	10	NIC	ENSG00000080189.15	novel	5820	10	NA	NA	-15	-207	intron_retention	FALSE	canonical	3	23	junction_8	78.6936551319399	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGCATTCTGGAGACCT	-46364459	False	NA	-21	True	AATAAA	-15	NA	46364473	46349736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357703_46358386_46358764_46364370
transcript_90928.known	chr20	-	5820	10	FSM	ENSG00000080189.15	ENST00000372230.10	5820	10	0	0	0	0	multi-exon	FALSE	canonical	3	183	junction_9	37.5029216968821	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAACTTCTGTAGGGCTTTT	-46360407	True	NA	-2	True	ATTAAA	-20	NA	46364425	46345983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358764_46364370
transcript_90929.known	chr20	-	2447	10	FSM	ENSG00000080189.15	ENST00000243896.6	2447	10	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_9	82.1786671425944	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTTTAACAACTAAGAGA	-46360383	True	NA	NA	False	ATTAAA	-24	NA	46364401	46349527	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46350525_46350760_46350891_46352050_46352227_46354881_46354966_46355072_46355242_46355801_46355875_46356573_46356638_46357622_46357774_46358386_46358959_46364370
transcript_9095.nic	chr1	-	2008	8	NIC	ENSG00000134207.17	novel	1897	8	NA	NA	-137	0	combination_of_known_junctions	TRUE	canonical	3	341	junction_2	61.5739144344057	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GAAAAGGGAAAAAAAAAAAG	-114151594	False	NA	16	True	NA	NA	NA	114153117	114091764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_114092083_114093734_114093804_114097726_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_90966.nic	chr20	-	1278	4	ISM	ENSG00000080189.15	ENST00000372230.10	5820	10	-48	10007	-15	-887	5prime_fragment	FALSE	canonical	3	183	junction_3	51.1359842859105	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACAGCCCAGCTCTGTTTG	-46364459	False	NA	1	True	ATTAAA	-19	NA	46364473	46355990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_46356638_46357622_46357774_46358386_46358764_46364370
transcript_90969.known	chr20	-	3666	22	FSM	ENSG00000062598.18	ENST00000290246.11	3666	22	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_20	40.5875219590395	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTGGTTCCTGTTAACAGC	-46404467	True	NA	-5	True	AATAAA	-19	NA	46406615	46366049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394533_46398696_46398772_46406547
transcript_90970.known	chr20	-	3574	21	FSM	ENSG00000062598.18	ENST00000396391.5	3574	21	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_20	43.5171230666734	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACAAACTGTGGTTCCTGTTA	-46404484	True	NA	-10	True	AATAAA	-14	NA	46406632	46366054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46367561_46368890_46368969_46370442_46370526_46371351_46371460_46371578_46371692_46371805_46371970_46373398_46373536_46374331_46374441_46374535_46374641_46375235_46375371_46375667_46375791_46380252_46380304_46383415_46383495_46386123_46386276_46387337_46387438_46389038_46389221_46393092_46393144_46393528_46393602_46394048_46394090_46394404_46394504_46406547
transcript_90979.nnic	chr20	-	1199	3	NIC	ENSG00000215452.5	novel	2722	4	NA	NA	-82	4	combination_of_known_splicesites	TRUE	canonical	0	0	junction_1	5.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGCGGTATTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	46459358	46414223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46414965_46457596_46457915_46459218
transcript_90980.nnic	chr20	-	1121	3	NNC	ENSG00000215452.5	novel	2722	4	NA	NA	-82	4	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	5.5	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCAGCCTGCGGTATTTTGT	NA	False	NA	0	True	AATAAA	-21	NA	46459358	46414223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_46414965_46457674_46457915_46459218
transcript_90984.known	chr20	-	3876	5	FSM	ENSG00000283757.1	ENST00000472805.2	3876	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.38748219369606	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGGTAGAAATAATATACATC	NA	False	NA	NA	False	AATAAA	-30	NA	46481357	46455032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46457915_46459218_46459623_46474500_46474689_46476231_46476326_46481049
transcript_90987.known	chr20	-	2722	4	FSM	ENSG00000215452.5	ENST00000400371.2	2722	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.64279609239471	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACCCAGCCTGCGGTATT	-46458786	True	NA	-4	True	AATAAA	-17	NA	46459276	46414227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46414965_46455894_46457504_46457596_46457915_46459218
transcript_90990.known	chr20	-	2495	6	FSM	ENSG00000198185.12	ENST00000625284.2	2495	6	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_5	37.711536696348	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATGAAAATATTCAACAGCAA	-46511340	True	NA	-23	True	AATAAA	-21	NA	46513555	46501087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46509604_46509752_46512081_46512141_46513496
transcript_90993.known	chr20	-	3890	5	FSM	ENSG00000198185.12	ENST00000347606.8	3890	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	33.380383460949	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATTTTTGTGCCAAATTTGT	-46511339	True	NA	NA	False	AGTAAA	-18	NA	46513554	46499631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46503098_46504213_46504307_46504613_46504741_46512081_46512141_46513409
transcript_91003.nnic	chr20	-	1485	10	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	1256	7	NA	NA	-20	-110	multi-exon	TRUE	canonical	1	1	junction_1	4	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATCACGTCAACATATT	-46684475	False	6763	NA	False	ATTAAA	-22	NA	46684487	46585457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46585744_46588058_46588164_46589159_46589256_46592403_46592530_46596156_46596343_46599970_46600038_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_91011.nnic	chr20	-	990	5	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3180	2	NA	NA	-71	455	multi-exon	FALSE	canonical	0	0	junction_1	4.20565096031518	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCTTCCATAGATGTTTT	-46684526	False	NA	NA	False	ATTAAA	-28	NA	46684538	46608253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46608574_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_91012.nnic	chr20	-	970	5	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3180	2	NA	NA	-18	449	multi-exon	FALSE	canonical	0	0	junction_1	4.20565096031518	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAAATATTCTTCCATAGA	-46684473	False	6763	NA	False	ATTAAA	-22	NA	46684485	46608259	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46608613_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_91014.nnic	chr20	-	1019	5	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	876	4	NA	NA	-71	0	multi-exon	FALSE	canonical	1	2	junction_1	3.34477204006491	109	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	-46684526	False	NA	-4	True	ATTAAA	-28	NA	46684538	46608708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042_46670140_46684395
transcript_91019.nnic	chr20	-	2177	4	NIC	ENSG00000158296.14	novel	3283	12	NA	NA	4413	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_3	7.25718035235908	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACTTTGGACCTGGAGATGA	-46583258	True	NA	-7	True	AATAAA	-12	NA	46583678	46558428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_46560199_46563413_46563552_46566228_46566391_46583571
transcript_91024.nic	chr20	-	869	4	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	876	4	NA	NA	-18	0	multi-exon	FALSE	canonical	0	0	junction_3	3.85861230093008	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	-46684473	False	6763	-4	True	ATTAAA	-28	NA	46684485	46608708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46609058_46610445_46610610_46613459_46613726_46684395
transcript_91025.nnic	chr20	-	477	4	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3180	2	NA	NA	-18	26703	multi-exon	FALSE	canonical	0	0	junction_1	4.71404520791032	23	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTCACATATTTCTT	-46684473	False	6763	NA	False	ATTAAA	-21	NA	46684485	46657661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46657830_46659425_46659548_46670042_46670140_46684395
transcript_91027.nnic	chr20	-	503	4	Fusion	ENSG00000172315.6_ENSG00000158296.14	novel	3180	2	NA	NA	-18	26703	multi-exon	FALSE	canonical	1	2	junction_1	3.39934634239519	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTCACATATTTCTT	-46684473	False	6763	NA	False	ATTAAA	-21	NA	46684485	46657661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_-_46657830_46667565_46667714_46670042_46670140_46684395
transcript_91028.nnic	chr20	-	380	3	NNC	ENSG00000172315.6	novel	3180	2	NA	NA	4955	26703	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGCCTCACATATTTCTT	-46684473	False	6763	NA	False	ATTAAA	-21	NA	46684485	46657661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_46657830_46659425_46659548_46684395
transcript_91030.known	chr20	-	876	4	FSM	ENSG00000158296.14	ENST00000417157.2	876	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.55902608401044	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTGATCCGTGTACCATCT	NA	False	NA	-4	True	ATTAAA	-28	NA	46670139	46608708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46609058_46610445_46610610_46613459_46613726_46670042
transcript_91031.known	chr20	-	700	1	FSM	ENSG00000273893.1	ENST00000610430.1	700	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTTTTAAGTATTCTGT	-46682363	False	NA	NA	False	AATAAA	-21	NA	46682375	46681675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46681700_46682400
transcript_91032.known	chr20	-	3180	2	FSM	ENSG00000172315.6	ENST00000372114.4	3180	2	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCGGTCTCGGGTATGTCTT	-46682681	True	NA	-33	True	ATTAAA	-19	NA	46689444	46684364	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_46687232_46689131
transcript_91033.known	chr20	+	4227	5	FSM	ENSG00000197496.6	ENST00000359271.4	4227	5	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	7.11951543294907	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGTGTGCAACAAACATATC	46709024	True	NA	28	True	AATAAA	-38	NA	46709648	46736347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46709741_46725040_46726325_46726863_46726987_46729352_46729489_46733755
transcript_91034.known	chr20	+	497	2	FSM	ENSG00000197496.6	ENST00000486000.2	497	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGTGGCATTCTGATTGAGC	46709074	True	NA	4	True	AATAAA	-15	NA	46709698	46710437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_46709741_46709982
transcript_9104.nic	chr1	-	2602	6	NIC	ENSG00000134207.17	novel	4424	8	NA	NA	-137	-4981	combination_of_known_junctions	FALSE	canonical	3	411	junction_5	46.9612606304388	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCATGGCCCCTCGGCTTA	-114151594	False	NA	NA	False	AATAAA	-16	NA	114153117	114096745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_114097878_114099093_114099266_114103600_114103722_114137494_114138054_114139614_114139881_114152765
transcript_91049.nnic	chr20	-	758	6	NNC	ENSG00000101040.20	novel	670	7	NA	NA	-12339	0	at_least_one_novel_splicesite	FALSE	canonical	3	223	junction_3	74.171153422338	72	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-47369203	False	NA	NA	False	AATACA	-36	NA	47369228	47291795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_47291889_47294665_47294780_47298728_47298873_47310055_47310205_47347855_47347927_47369041
transcript_91051.nnic	chr20	-	806	6	NNC	ENSG00000101040.20	novel	5362	22	NA	NA	-12312	0	at_least_one_novel_splicesite	FALSE	canonical	3	173	junction_3	90.9799978017146	75	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGGCCTCCGTCAAAGAAC	-47361339	True	NA	NA	False	AATACA	-36	NA	47369201	47291795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_47291889_47294665_47294780_47298728_47298948_47310055_47310205_47347855_47347927_47369041
transcript_91059.nnic	chr20	-	428	3	NNC	ENSG00000101040.20	novel	341	3	NA	NA	-12407	0	at_least_one_novel_splicesite	FALSE	canonical	3	303	junction_2	26.5	157	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAAAAGAAACCTGGC	-47369271	False	NA	NA	False	NA	NA	NA	47369296	47310102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_47310205_47347855_47347927_47369041
transcript_91061.known	chr20	+	2253	1	FSM	ENSG00000267882.2	ENST00000599904.2	2253	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAGATAGTAGTGGGGTGA	47318491	True	NA	NA	False	AATAAA	-23	NA	47318501	47320754	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_47318500_47320800
transcript_91062.known	chr20	+	1809	2	FSM	ENSG00000231119.2	ENST00000413818.2	1809	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGGGCTACTGGACACTCAT	47352538	True	NA	NA	False	ATTAAA	-30	NA	47352560	47354633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_47352741_47353004
transcript_91063.nic	chr20	+	945	2	ISM	ENSG00000124151.19	ENST00000371997.3	6750	23	-77	71771	-23	-40102	5prime_fragment	FALSE	canonical	3	62	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAATAGAAAAAAGGAGAAAA	47498776	True	NA	NA	False	AAAAAG	-10	NA	47501863	47583971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_47502020_47583182
transcript_91064.known	chr20	-	4238	21	FSM	ENSG00000196562.15	ENST00000484875.5	4238	21	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_20	49.2468019266226	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTGGTGTGTCTGTTT	-47786519	True	NA	1	True	NA	NA	NA	47786616	47657405	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_47658393_47659398_47659453_47659696_47659731_47661772_47661897_47663069_47663213_47663452_47663623_47664129_47664190_47665198_47665294_47665856_47665954_47666259_47666489_47672197_47672394_47676493_47676624_47677077_47677135_47678675_47678805_47682993_47683170_47684430_47684582_47690125_47690296_47702518_47702671_47736702_47736943_47757188_47757464_47786047
transcript_91065.known	chr20	-	404	2	FSM	ENSG00000236874.1	ENST00000446280.1	404	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTCTGATATAAAATGTGT	-48384873	False	NA	NA	False	AATAAA	-16	NA	48384895	48383322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_48383471_48384639
transcript_91067.known	chr20	+	3550	25	FSM	ENSG00000124207.17	ENST00000262982.3	3550	25	0	0	0	0	multi-exon	FALSE	canonical	3	1617	junction_8	140.692014896211	433	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAACATCTTAAGGGCAGGTT	49031771	True	NA	32	True	AATAAA	-22	NA	49046311	49096949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49046424_49058452_49058549_49063201_49063345_49066191_49066294_49066364_49066511_49067189_49067281_49068714_49068823_49070204_49070298_49072285_49072454_49072567_49072698_49074784_49074851_49075317_49075521_49076979_49077065_49078560_49078623_49084025_49084163_49085282_49085387_49088008_49088107_49089246_49089398_49089537_49089747_49090741_49090840_49090936_49091023_49092045_49092128_49094139_49094287_49094731_49094964_49096348
transcript_91070.known	chr20	-	3651	14	FSM	ENSG00000124214.21	ENST00000371856.7	3651	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_12	286.575660982324	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTTTGGTCCTGTTGAGCA	-49170871	True	NA	NA	False	AATAAA	-15	NA	49188334	49113338	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49165996_49166286_49174194_49174270_49188115
transcript_91071.known	chr20	-	3334	14	FSM	ENSG00000124214.21	ENST00000340954.11	3334	14	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_13	279.188553706469	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_91072.known	chr20	-	3211	13	FSM	ENSG00000124214.21	ENST00000360426.8	3211	13	0	0	0	0	multi-exon	FALSE	canonical	3	643	junction_8	86.7715711253147	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_91075.known	chr20	-	3154	12	FSM	ENSG00000124214.21	ENST00000371802.5	3154	12	0	0	0	0	multi-exon	FALSE	canonical	3	92	junction_11	290.974026843498	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTTTGTTAATTTATTCT	-49170904	True	NA	-10	True	AATAAA	-14	NA	49188367	49113522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49114894_49115781_49115868_49117125_49117249_49117776_49118097_49118332_49118409_49119981_49120129_49123091_49123236_49124374_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49188115
transcript_9108.known	chr1	-	1275	7	FSM	ENSG00000116752.6	ENST00000369541.4	1275	7	0	0	0	0	multi-exon	FALSE	canonical	3	606	junction_3	49.4887753827965	2705	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCAGGAGGCGGTTACTGT	-114575492	True	NA	-4	True	AATAAA	-23	NA	114581615	114567556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114568257_114569991_114570073_114570699_114570751_114575589_114575752_114576687_114576759_114581298_114581392_114581498
transcript_91081.known	chr20	-	1085	7	FSM	ENSG00000124214.21	ENST00000437404.2	1085	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_6	345.498191022761	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGAACTTTTCTGAACAC	-49170904	True	NA	NA	False	AGTAAA	-38	NA	49188367	49124374	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49124606_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49179121_49179245_49188115
transcript_91083.nic	chr20	-	954	6	ISM	ENSG00000124214.21	ENST00000360426.8	3211	13	-22	10864	-22	-12	5prime_fragment	FALSE	canonical	3	643	junction_1	67.8751795577735	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCATAGTCAAGGTGAGAAC	-49188378	False	NA	NA	False	AGTAAA	-26	NA	49188389	49124386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_49124588_49135832_49135932_49151581_49151748_49153932_49154072_49174194_49174270_49188115
transcript_91087.nnic	chr20	+	584	2	Antisense	novelGene_ENSG00000158445.10_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTTAGTGATTCTGTTTC	49449183	True	NA	NA	False	AATAAA	-17	NA	49449194	49463124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr20_+_49449263_49462608
transcript_9109.known	chr1	-	5701	18	FSM	ENSG00000175984.15	ENST00000393276.7	5701	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	4.25322999588829	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCCTTGGAGAATTCTTTAA	-114669620	True	NA	1	True	AATAAA	-20	NA	114670111	114582847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114585632_114587386_114587474_114587715_114587953_114594472_114594579_114595831_114595874_114599273_114599452_114600203_114600353_114600819_114600961_114601507_114601586_114602124_114602195_114604921_114605032_114608685_114608874_114611072_114611118_114618385_114618483_114622986_114623100_114623506_114623644_114625178_114626189_114669982
transcript_91094.known	chr20	+	596	5	FSM	ENSG00000177410.13	ENST00000458653.5	596	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	326.858818911162	1198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49278206	False	NA	16	True	AATAAA	-17	NA	49278270	49289260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278398_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_91098.known	chr20	+	568	5	FSM	ENSG00000177410.13	ENST00000428008.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	308.223133460161	1760	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244549	True	NA	16	True	AATAAA	-17	NA	49278639	49289260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49280902_49280965_49289044
transcript_9110.known	chr1	-	4326	7	FSM	ENSG00000213281.5	ENST00000369535.5	4326	7	0	0	0	0	multi-exon	FALSE	canonical	3	1155	junction_3	78.3744572903415	359	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATATTCACTGAAGTG	-114701486	True	NA	-7	True	AATAAA	-28	NA	114716771	114704468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114708051_114708153_114708193_114708530_114708655_114709568_114709729_114713799_114713979_114716049_114716178_114716657
transcript_91107.known	chr20	+	504	4	FSM	ENSG00000177410.13	ENST00000326677.9	504	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	355.359911451287	1519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49244551	True	NA	16	True	AATAAA	-17	NA	49278641	49289260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278739_49279103_49279209_49280484_49280571_49289044
transcript_91121.known	chr20	+	640	2	FSM	ENSG00000177410.13	ENST00000663883.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_1	0	436	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTTCTGAATGTTTTATT	49244551	True	NA	NA	False	AAAAAG	-6	NA	49278641	49279646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278739_49279103
transcript_91123.known	chr20	+	2570	21	FSM	ENSG00000124228.15	ENST00000618172.5	2570	21	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_12	75.864270246276	915	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCAATCCAAGTGTATATCTT	49206688	True	NA	21	True	ATTAAA	-27	NA	49219415	49244073	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49233710_49234934_49235089_49236149_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_91124.known	chr20	+	4929	19	FSM	ENSG00000124228.15	ENST00000484427.5	4929	19	0	0	0	0	multi-exon	FALSE	canonical	3	522	junction_5	72.8712715836784	618	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCAAGTGTATATCTTATTA	49206619	True	NA	25	True	ATTAAA	-31	NA	49219346	49244077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49219542_49221451_49221599_49222956_49223017_49223267_49223434_49224944_49224992_49225112_49225200_49226429_49226536_49228714_49228889_49230198_49230350_49233305_49233406_49233567_49236232_49236332_49236511_49238948_49239056_49239235_49239339_49241892_49241988_49242082_49242207_49242593_49242682_49243628_49243704_49243815
transcript_91125.known	chr20	+	627	2	FSM	ENSG00000177410.13	ENST00000667889.1	627	2	0	0	0	0	multi-exon	FALSE	canonical	3	1272	junction_1	0	1355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTTTATTCTCACAGTT	49244551	True	NA	NA	False	AAAAAG	-15	NA	49278641	49279655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49278717_49279103
transcript_91126.known	chr20	+	527	3	FSM	ENSG00000177410.13	ENST00000659056.1	527	3	0	0	0	0	multi-exon	FALSE	canonical	3	499	junction_1	31.5	642	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTTTGTTTGGCCATT	49280307	False	NA	16	True	AATAAA	-17	NA	49280321	49289260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49280571_49280902_49280965_49289044
transcript_91127.known	chr20	+	597	2	FSM	ENSG00000177410.13	ENST00000618800.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTCACAATTTCTCCAT	49290877	False	NA	4	True	AATAAA	-16	NA	49290887	49295738	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49291149_49295402
transcript_91128.known	chr20	-	5570	10	FSM	ENSG00000124212.6	ENST00000244043.5	5570	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	9.78787357579789	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCCTCTGAGTGTGATTCT	-49567142	True	NA	-5	True	ATTAAA	-19	NA	49568137	49503873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49508065_49511027_49511180_49513079_49513262_49514226_49514396_49524057_49524240_49539569_49539722_49544304_49544449_49547840_49548020_49550065_49550190_49568042
transcript_91133.nic	chr20	+	429	3	ISM	ENSG00000197818.12	ENST00000361573.3	6147	16	-1	69057	-1	7741	5prime_fragment	FALSE	canonical	3	33	junction_1	11.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCATTTTTTGAGTGCCT	49811754	True	NA	NA	False	AATAAA	-15	NA	49812826	49823185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_49812949_49815007_49815190_49823060
transcript_91135.known	chr20	-	4043	3	FSM	ENSG00000158480.11	ENST00000289431.10	4043	3	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_2	5.5	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-49914300	True	NA	NA	False	AATAAA	-19	NA	49915529	49903390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_49906846_49908154_49908593_49915379
transcript_91136.nnic	chr20	-	529	2	NNC	ENSG00000158480.11	novel	4043	3	NA	NA	11	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAAGTGTTTGGGGTTTTAT	-49914289	True	NA	NA	False	AATAAA	-19	NA	49915518	49903390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_49903781_49915379
transcript_91140.known	chr20	+	2438	6	FSM	ENSG00000124226.11	ENST00000622999.3	2438	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	464.00068965466	306	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATCTAAGTGGTAAGCTATG	49924503	True	NA	4	True	AATAAA	-12	NA	49936376	49953878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49941582_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_91143.known	chr20	+	624	5	FSM	ENSG00000124226.11	ENST00000623528.3	624	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	512.622912090359	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTGCTATCTGTCTCATGT	49924462	True	NA	-32	True	NA	NA	NA	49936335	49952152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_91149.known	chr20	+	2447	6	FSM	ENSG00000124226.11	ENST00000244061.6	2447	6	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_2	64.2171316706064	3847	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTAAGCTATGGTTCTTG	49924523	True	NA	11	True	AATAAA	-19	NA	49936396	49953885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49949247_49949356_49952075
transcript_91150.known	chr20	+	580	5	FSM	ENSG00000124226.11	ENST00000625177.3	580	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	480.267828924653	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATCGACCAGTGAGCAGAGT	49924525	True	NA	-56	True	NA	NA	NA	49936398	49952128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49936553_49941560_49941712_49945381_49945489_49946135_49946251_49952075
transcript_91151.known	chr20	+	1705	3	FSM	ENSG00000124216.4	ENST00000244050.3	1705	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	4	61	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTGGTGTCATAGAGGA	49982364	True	NA	NA	False	AATAAA	-24	NA	49982979	49988886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_49983142_49983823_49984352_49987871
transcript_91154.known	chr20	-	7703	6	FSM	ENSG00000240849.11	ENST00000371652.9	7703	6	0	0	0	0	multi-exon	FALSE	canonical	3	217	junction_5	29.5472502950782	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGAGTTATTTTTTCTT	-50149407	True	NA	1	True	AATAAA	-19	NA	50153723	50118253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50125180_50127974_50128188_50129545_50129691_50130855_50130948_50143501_50143622_50153516
transcript_91157.known	chr20	-	2459	5	FSM	ENSG00000244687.13	ENST00000371677.7	2459	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	1405.64778216309	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484_50115622_50115698
transcript_91159.known	chr20	-	2258	5	FSM	ENSG00000244687.13	ENST00000557021.5	2258	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_4	1432.34440690778	498	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094475	True	NA	-1	True	AATAAA	-25	NA	50113198	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50098881_50098982_50113106
transcript_91170.known	chr20	-	2536	4	FSM	ENSG00000244687.13	ENST00000340309.7	2536	4	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_3	1299.25217807099	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50115484
transcript_91184.known	chr20	-	1983	3	FSM	ENSG00000244687.13	ENST00000396059.7	1983	3	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_2	1427	264	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094449	True	NA	-1	True	AATAAA	-25	NA	50113172	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50113106
transcript_91185.known	chr20	-	2387	3	FSM	ENSG00000244687.13	ENST00000415862.6	2387	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	1468	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50114895	True	NA	-1	True	AATAAA	-25	NA	50115954	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50115484
transcript_91194.known	chr20	-	2110	4	FSM	ENSG00000244687.13	ENST00000371674.8	2110	4	0	0	0	0	multi-exon	FALSE	canonical	3	2636	junction_3	123.839501865205	1717	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094427	True	NA	-1	True	AATAAA	-25	NA	50113150	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50084128_50084255_50096671_50096821_50113106
transcript_91195.known	chr20	-	1973	3	FSM	ENSG00000244687.13	ENST00000371657.9	1973	3	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	1307.5	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCTGTACTTTTCTTCCT	-50094416	True	NA	-1	True	AATAAA	-25	NA	50113139	50081123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50082915_50096671_50096821_50113106
transcript_91196.known	chr20	-	628	3	FSM	ENSG00000244687.13	ENST00000490289.5	628	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	1316.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGAAGTTGTAATGCGTAGCT	-50094423	True	NA	NA	False	NA	NA	NA	50113146	50094943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50095383_50096671_50096821_50113106
transcript_91197.known	chr20	+	826	4	FSM	ENSG00000231742.6	ENST00000661469.1	826	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.85861230093008	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTTTCCCTTCATTTC	50172431	True	NA	NA	False	AATAAA	-17	NA	50172566	50176672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50172789_50172922_50173018_50173201_50173319_50176280
transcript_91198.nnic	chr20	+	552	3	NNC	ENSG00000231742.6	novel	909	3	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	3.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	50172391	False	NA	9	True	AATAAA	-30	NA	50172403	50173592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_50172470_50172922_50173018_50173201
transcript_91199.nnic	chr20	+	553	3	NNC	ENSG00000231742.6	novel	909	3	NA	NA	-112	0	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	1	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAACCTTTCCCTTCATTTC	50172391	False	NA	NA	False	AATAAA	-17	NA	50172403	50176672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_50172470_50172922_50173018_50176280
transcript_91200.known	chr20	+	685	3	FSM	ENSG00000231742.6	ENST00000664618.1	685	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTGTCACTAATGTTTTTT	50172431	True	NA	9	True	AATAAA	-30	NA	50172566	50173592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50172789_50172926_50173018_50173220
transcript_91201.known	chr20	+	764	3	FSM	ENSG00000231742.6	ENST00000411453.3	764	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	1.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTCCCTTCATTTCAGAG	50172380	True	NA	NA	False	AATAAA	-21	NA	50172515	50176676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50172789_50172922_50173018_50176280
transcript_91202.known	chr20	+	3979	10	FSM	ENSG00000196396.10	ENST00000371621.5	3979	10	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_9	6.28539361054709	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTTTTTTGACTTTTTG	50504488	True	NA	NA	False	ATTAAA	-21	NA	50510382	50585241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_9121.known	chr1	-	4006	19	FSM	ENSG00000009307.17	ENST00000339438.10	4006	19	0	0	0	0	multi-exon	FALSE	canonical	2	2104	junction_7	396.732553662795	1396	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTAGCGCTTTCATTATTGA	-114716274	True	NA	0	True	AATAAA	-28	NA	114757983	114716912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_91210.nic	chr20	+	605	5	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-67	10686	-5	-10205	5prime_fragment	FALSE	canonical	3	46	junction_4	7.07106781186548	447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGATGATCTTTGAAGACAC	NA	False	NA	NA	False	AAAAAG	-9	NA	50510315	50574555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379_50568479_50574516
transcript_91211.nic	chr20	+	570	4	ISM	ENSG00000196396.10	ENST00000371621.5	3979	10	-67	16759	-5	-16278	5prime_fragment	FALSE	canonical	3	56	junction_1	4.71404520791032	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTCGGCTTCATTTGCTGT	NA	False	NA	NA	False	NA	NA	NA	50510315	50568482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_50510591_50561362_50561454_50564968_50565070_50568379
transcript_91212.known	chr20	+	3469	9	FSM	ENSG00000196396.10	ENST00000541713.5	3469	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	17.1641887370187	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATTTGGGGTGCTTCCCATT	50504426	True	NA	15	True	AATAAA	-21	NA	50510320	50584760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50510591_50564968_50565070_50568379_50568479_50574516_50574655_50578419_50578630_50579167_50579330_50579702_50579927_50581264_50581461_50582691
transcript_91214.known	chr20	+	315	1	FSM	ENSG00000231302.1	ENST00000426026.1	315	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCCCTCCCCTGCCCTCTC	NA	False	NA	NA	False	NA	NA	NA	50620762	50621077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50620800_50621100
transcript_9122.known	chr1	-	4097	20	FSM	ENSG00000009307.17	ENST00000358528.9	4097	20	0	0	0	0	multi-exon	FALSE	canonical	2	593	junction_15	817.583104622392	1107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCTAGCGCTTTCATTAT	-114716275	True	NA	-3	True	AATAAA	-25	NA	114757984	114716915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114749820_114750208_114757924
transcript_91221.known	chr20	+	787	6	FSM	ENSG00000124243.19	ENST00000609336.5	787	6	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_4	123.869931783302	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	50791345	True	NA	1	True	TTTAAA	-15	NA	50795030	50876723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50875996_50876094_50876485
transcript_91223.known	chr20	+	1114	5	FSM	ENSG00000124243.19	ENST00000371608.8	1114	5	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	11.1130553854464	674	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	50791375	True	NA	16	True	AATAAA	-16	NA	50795060	50877177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50841765_50841901_50876485
transcript_91229.known	chr20	+	365	4	FSM	ENSG00000124243.19	ENST00000445038.5	365	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	107.524674170888	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCACCACCCCCGCACCTG	50791384	True	NA	NA	False	NA	NA	NA	50795069	50876572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50795174_50818210_50818283_50830278_50830381_50876485
transcript_9123.known	chr1	-	3228	18	FSM	ENSG00000009307.17	ENST00000261443.9	3228	18	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_17	789.970924960999	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATGAATCTTGTTTTTTTT	-114716265	True	NA	-23	True	AATAAA	-14	NA	114757974	114717294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114739691_114739891_114757924
transcript_9124.known	chr1	-	2667	19	FSM	ENSG00000009307.17	ENST00000534699.5	2667	19	0	0	0	0	multi-exon	FALSE	canonical	2	117	junction_18	1034.68266143613	578	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAAAACTTAAGGTGGCGCC	-114716273	True	NA	-9	True	AATAAA	-45	NA	114757982	114717956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737470_114737564_114737962_114738073_114739691_114739891_114757924
transcript_91242.nnic	chr20	+	401	2	NNC	ENSG00000124243.19	novel	1378	6	NA	NA	75857	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCGAGATGGGGTCTCACT	NA	False	NA	1	True	TTTAAA	-15	NA	50870956	50876723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_50871120_50876485
transcript_91243.nnic	chr20	+	855	2	NNC	ENSG00000124243.19	novel	1378	6	NA	NA	75857	0	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	192	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCCTGGTCTGGTGTGAGAA	NA	False	NA	16	True	AATAAA	-16	NA	50870956	50877177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_50871120_50876485
transcript_9125.known	chr1	-	3459	18	FSM	ENSG00000009307.17	ENST00000530886.5	3459	18	0	0	0	0	multi-exon	FALSE	canonical	2	115	junction_16	790.308021069058	323	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGTGCCTGAAATGAATCT	-114716318	True	NA	31	True	AATAAA	-4	NA	114758027	114717304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114718217_114718612_114718746_114719578_114719743_114720538_114720718_114723882_114724003_114725220_114725334_114726210_114726387_114726982_114727091_114730257_114730423_114730507_114730649_114732603_114732817_114733731_114733858_114733988_114734118_114734441_114734524_114736757_114736856_114737962_114738073_114749820_114750208_114757924
transcript_91292.known	chr20	+	993	4	FSM	ENSG00000259456.4	ENST00000664246.1	993	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTATTCTAATAACTCAAG	50930997	True	NA	21	True	AATAAA	-18	NA	50931022	50945134	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50931055_50931374_50931450_50933719_50933828_50944356
transcript_91293.known	chr20	+	1023	4	FSM	ENSG00000259456.4	ENST00000655542.1	1023	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4.78423336480244	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCAAGGCTTAATTCCATTT	50930980	True	NA	35	True	AATAAA	-32	NA	50931005	50945148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_50931055_50931371_50931450_50933723_50933828_50944356
transcript_91295.known	chr20	-	1054	9	FSM	ENSG00000000419.14	ENST00000371588.10	1054	9	0	0	0	0	multi-exon	FALSE	canonical	3	327	junction_8	32.4027390817505	1969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956420	True	NA	-21	True	AATAAA	-23	NA	50958532	50934869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_91296.known	chr20	-	1161	10	FSM	ENSG00000000419.14	ENST00000371582.8	1161	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_3	148.606199295776	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956443	True	NA	-18	True	AATAAA	-26	NA	50958555	50934866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941128_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_91297.known	chr20	-	959	7	FSM	ENSG00000000419.14	ENST00000683048.1	959	7	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	165.891195935435	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTGCTGCCTTCATTAGA	-50956420	True	NA	-21	True	AATAAA	-23	NA	50958532	50934869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50942030_50942127_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_91298.known	chr20	-	1097	9	FSM	ENSG00000000419.14	ENST00000466152.5	1097	9	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	128.686088506101	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTGCCTTCATTAGAGTA	-50956438	True	NA	-18	True	AATAAA	-26	NA	50958550	50934866	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940956_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_91299.known	chr20	-	1084	10	FSM	ENSG00000000419.14	ENST00000371584.9	1084	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	150.265772779884	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCAATGTTCTCAATTTTCGT	-50956420	True	NA	-30	True	ATTAAA	-27	NA	50958532	50934944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_50935237_50936147_50936263_50940864_50940934_50941104_50941210_50942030_50942127_50945736_50945763_50945846_50945924_50948628_50948663_50955185_50955286_50958362
transcript_91301.known	chr20	-	1918	4	FSM	ENSG00000101115.13	ENST00000395997.3	1918	4	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_2	97.1642366763044	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGAGAACTTGCGTGGAAGG	-51793862	True	NA	-89	True	AAGAAA	-21	NA	51802475	51784264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_51784685_51788860_51789142_51791332_51792353_51802278
transcript_91302.known	chr20	-	5209	4	FSM	ENSG00000101115.13	ENST00000217086.9	5209	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	49.5939064357261	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCAGGTGTATATAAATTTT	-51793908	True	NA	-38	True	AATAAA	-23	NA	51802521	51782330	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_51784685_51788860_51789142_51790021_51792353_51802278
transcript_91306.known	chr20	-	3040	6	FSM	ENSG00000020256.20	ENST00000371515.8	3040	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	23.832750575626	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189578	True	NA	-13	True	AATAAA	-22	NA	52191768	52151277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52165863_52166026_52186831_52187066_52191590
transcript_91311.known	chr20	-	762	5	FSM	ENSG00000020256.20	ENST00000395989.7	762	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	13.4420050587701	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAGCGCCAAGTTCAAAAT	-52104900	False	147	NA	False	NA	NA	NA	52104923	52085240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52104652
transcript_91312.known	chr20	-	2234	5	FSM	ENSG00000020256.20	ENST00000371523.8	2234	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	13.0575648572006	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATGATGTAAGGAACACTC	NA	False	NA	-5	True	AATAAA	-19	NA	52105644	52084010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52085267_52088391_52088644_52097372_52097436_52098437_52098588_52105131
transcript_91313.known	chr20	-	2876	5	FSM	ENSG00000020256.20	ENST00000346617.8	2876	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_3	30.761176830544	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAATGTTAATGATTCTTT	-52189570	True	NA	-13	True	AATAAA	-22	NA	52191760	52151277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_52153429_52160122_52160375_52164694_52164758_52186831_52187072_52191590
transcript_91317.nnic	chr20	-	755	3	NNC	ENSG00000020256.20	novel	1841	9	NA	NA	-12	-24748	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	33.5	42	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACAAGGATATTCATTTA	-52191491	False	NA	NA	False	AATAAA	-23	NA	52191791	52185008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_52185323_52186831_52187072_52191590
transcript_9133.known	chr1	-	349	4	FSM	ENSG00000052723.12	ENST00000510745.5	349	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_3	118.558939866305	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCCATCAGCAGTGAGTCT	-114771527	False	NA	NA	False	NA	NA	NA	114780512	114774344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114774373_114776345_114776460_114779141_114779285_114780448
transcript_91340.known	chr20	+	1230	4	FSM	ENSG00000101132.10	ENST00000371419.7	1230	4	0	0	0	0	multi-exon	FALSE	canonical	3	2746	junction_1	173.513368040877	16069	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CAAAAGACAAACATTTTGGG	54172669	True	NA	10	True	AATAAA	-26	NA	54208086	54219961	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_54208125_54214350_54214459_54215299_54215441_54219018
transcript_91341.known	chr20	+	1965	8	FSM	ENSG00000101134.12	ENST00000262593.10	1965	8	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_3	3.49343407446785	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	54474809	True	NA	10	True	AATAAA	-18	NA	54475592	54651169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_54476013_54554932_54555041_54588482_54588598_54588686_54588807_54591615_54591806_54610387_54610524_54643457_54643579_54650414
transcript_91343.nnic	chr20	+	800	3	NNC	ENSG00000101134.12	novel	1965	8	NA	NA	-42	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	27	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTCTTTGGATTCTGGC	54474892	True	NA	10	True	AATAAA	-18	NA	54475675	54651169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_54476013_54554932_54554950_54650723
transcript_91345.known	chr20	+	742	2	FSM	ENSG00000101134.12	ENST00000491469.1	742	2	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	0	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGGTTCATTACATTGAATT	54474842	True	NA	5	True	AATAAA	-17	NA	54475625	54495154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_54476013_54494799
transcript_91346.known	chr20	+	497	1	FSM	ENSG00000185834.10	ENST00000432629.1	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	153	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCACAAAGGAAAATATTTCA	55074627	False	NA	NA	False	NA	NA	NA	55074643	55075140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_55074600_55075100
transcript_91348.known	chr20	+	2987	3	FSM	ENSG00000124098.10	ENST00000371384.4	2987	3	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_2	8	142	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATTGTTTCTCTAATTTA	56357005	True	NA	NA	False	AATAAA	-22	NA	56358973	56368663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56359192_56365086_56365263_56366070
transcript_91352.nic	chr20	-	2316	11	NIC	ENSG00000087586.18	novel	2223	10	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	3	124	junction_10	388.918294761252	519	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378491	True	NA	-17	True	AATAAA	-15	NA	56392290	56369389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392167
transcript_91358.known	chr20	-	2145	10	FSM	ENSG00000087586.18	ENST00000395911.5	2145	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	379.653773396658	482	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378416	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56392153
transcript_91360.known	chr20	-	2238	10	FSM	ENSG00000087586.18	ENST00000395914.5	2238	10	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_9	374.090139002307	541	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTGGAGTGCTGTGTAATT	-56378496	True	NA	-16	True	AATAAA	-16	NA	56392295	56369388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392153
transcript_91361.known	chr20	-	2223	10	FSM	ENSG00000087586.18	ENST00000312783.10	2223	10	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_9	361.773034366938	557	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378496	True	NA	-17	True	AATAAA	-15	NA	56392295	56369389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56392167
transcript_91370.known	chr20	-	2248	9	FSM	ENSG00000087586.18	ENST00000347343.6	2248	9	0	0	0	0	multi-exon	FALSE	canonical	3	148	junction_8	296.17855151074	604	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378406	True	NA	-17	True	AATAAA	-15	NA	56392205	56369389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56391942
transcript_91388.known	chr20	-	2033	9	FSM	ENSG00000087586.18	ENST00000395915.8	2033	9	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_8	253.331798240963	797	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGGAGTGCTGTGTAAT	-56378416	True	NA	-17	True	AATAAA	-15	NA	56392215	56369389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370341_56370484_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_91389.known	chr20	-	1902	8	FSM	ENSG00000087586.18	ENST00000395907.5	1902	8	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_7	270.595035928946	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTATTTTTTCTCTGGTG	-56378416	True	NA	-6	True	AATAAA	-15	NA	56392215	56369664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56370660_56373407_56373557_56381432_56381572_56382984_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56392167
transcript_91390.known	chr20	-	879	7	FSM	ENSG00000087586.18	ENST00000420474.5	879	7	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_6	435.478057873056	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGTTTTCAGGTTCATGT	-56378468	True	NA	NA	False	AATACA	-13	NA	56392267	56382984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56388686_56388785_56390555_56390666_56392167
transcript_91391.known	chr20	-	744	6	FSM	ENSG00000087586.18	ENST00000422322.5	744	6	0	0	0	0	multi-exon	FALSE	canonical	3	96	junction_5	443.822757415615	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATTTGGCAAGAGAAAAGC	-56378332	False	NA	NA	False	NA	NA	NA	56392131	56383110	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_56383177_56384269_56384325_56386256_56386534_56388155_56388203_56390555_56390666_56391942
transcript_91398.nic	chr20	+	1829	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-11	-413	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	116.403780007352	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAATTTTCATTTGGTTCTT	NA	False	NA	8	True	ATTAAA	-16	NA	56392359	56404049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_91399.nic	chr20	+	2035	6	NIC	ENSG00000101138.12	novel	1236	5	NA	NA	-11	-207	combination_of_known_junctions	FALSE	canonical	3	88	junction_1	116.403780007352	320	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	NA	False	NA	5	True	AATAAA	-15	NA	56392359	56404255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_56392539_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_91401.known	chr20	+	4032	6	FSM	ENSG00000101138.12	ENST00000217109.9	4032	6	0	0	0	0	multi-exon	FALSE	canonical	3	270	junction_1	44.7633778886268	423	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAAGCTAGTTTATTTTTTTT	56389399	True	NA	8	True	AATAAA	-16	NA	56392644	56406362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56392714_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_91410.nic	chr20	+	2023	6	NIC	ENSG00000101138.12	novel	2234	6	NA	NA	-2	-207	combination_of_known_junctions	FALSE	canonical	3	21	junction_1	143.072009841198	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTATTGTTATATATTTTT	56389403	True	NA	5	True	AATAAA	-15	NA	56392648	56404255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_56392816_56395520_56395722_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_91411.known	chr20	+	2234	6	FSM	ENSG00000101138.12	ENST00000493039.5	2234	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	180.891790858513	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATTGCTCTCAGGTGTTGCC	56389437	False	NA	NA	False	ATTAAA	-15	NA	56392682	56404462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56392816_56395520_56395760_56397206_56397485_56397643_56397842_56398966_56399358_56403467
transcript_91418.nnic	chr20	+	1448	11	Fusion	ENSG00000022277.13_ENSG00000213714.1	novel	1745	10	NA	NA	6	0	multi-exon	FALSE	canonical	3	11	junction_9	277.128057042227	154	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCCATGTTTGAGAGCTTG	56462265	True	NA	NA	False	AATAAA	-20	NA	56468590	56536520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56527123_56527206_56533422_56533591_56536171
transcript_91430.known	chr20	+	1745	10	FSM	ENSG00000022277.13	ENST00000023939.8	1745	10	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	247.682193820635	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTGTTTTTATCTTTTC	NA	False	NA	25	True	AATAAA	-21	NA	56468584	56518886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56468767_56472325_56472416_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_91434.known	chr20	+	2176	9	FSM	ENSG00000022277.13	ENST00000357348.10	2176	9	0	0	0	0	multi-exon	FALSE	canonical	3	565	junction_7	32.6417581481145	2095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTTTTGTCATGGACTTTT	56462301	True	NA	2	True	AATAAA	-13	NA	56468626	56519449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56516934_56516990_56517105_56517202_56518086
transcript_9144.known	chr1	-	415	2	FSM	ENSG00000052723.12	ENST00000466657.1	415	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-114771700	True	NA	-19	True	AATAAA	-17	NA	114780685	114779106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114779285_114780448
transcript_91440.known	chr20	+	1572	8	FSM	ENSG00000022277.13	ENST00000395881.7	1572	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	217.964516865119	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTTTTTATCTTTTCT	56462288	True	NA	26	True	AATAAA	-22	NA	56468613	56518887	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_56468767_56473300_56473396_56474677_56474772_56476984_56477125_56484110_56484190_56513314_56513429_56517105_56517202_56518086
transcript_9145.known	chr1	-	412	2	FSM	ENSG00000052723.12	ENST00000474562.1	412	2	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AACCAAATTGAAATCTTGAG	-114771642	True	NA	-26	True	AATAAA	-10	NA	114780627	114779113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114779285_114780386
transcript_91450.known	chr20	-	4021	7	FSM	ENSG00000101144.13	ENST00000395863.8	4021	7	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	12.7856256093404	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGGCCTGTGTCTGTCT	-57265944	True	NA	-15	True	AATAAA	-21	NA	57266641	57168752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57183721_57183920_57202474_57202624_57228228_57228422_57265704
transcript_91451.known	chr20	-	1746	6	FSM	ENSG00000101144.13	ENST00000395864.7	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_3	62.9933329805623	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGTAATAAATGTCACAATAA	-57266313	False	NA	-74	True	NA	NA	NA	57266342	57170530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57171109_57173199_57173311_57174930_57175008_57202474_57202624_57228228_57228422_57265704
transcript_91452.known	chr20	+	2362	12	FSM	ENSG00000101146.13	ENST00000371242.6	2362	12	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	121.184648401786	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCAGTGGTTTAAATTCTTT	57347314	True	NA	13	True	AATAAA	-28	NA	57351222	57379211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_57351359_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_91455.known	chr20	+	2385	12	FSM	ENSG00000101146.13	ENST00000395841.7	2385	12	0	0	0	0	multi-exon	FALSE	canonical	3	414	junction_9	23.631468024474	766	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTGCACTCAGTGGTTT	57347346	True	NA	4	True	AATAAA	-19	NA	57351254	57379202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_57351423_57354031_57354129_57354711_57354817_57356445_57356539_57365355_57365443_57366806_57366894_57367007_57367080_57368704_57368813_57373474_57373582_57373662_57373739_57374606_57374802_57378012
transcript_91456.known	chr20	-	3500	11	FSM	ENSG00000124092.13	ENST00000243914.8	3500	11	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	1.6	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGTTATATGTCAGCAT	-57525038	True	NA	2	True	AATAAA	-23	NA	57525140	57497165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57498702_57503435_57503602_57508605_57508789_57512591_57512753_57514591_57514742_57515713_57515835_57518757_57518892_57519206_57519378_57523067_57523279_57523662_57524217_57525027
transcript_91458.known	chr20	-	4546	4	FSM	ENSG00000124225.16	ENST00000347215.8	4546	4	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	77.6587978846498	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTTTCACTTCTTTGGCC	-57709823	True	NA	2	True	AATAAA	-23	NA	57710589	57648391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57710459
transcript_9146.known	chr1	-	455	3	FSM	ENSG00000052723.12	ENST00000369524.5	455	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	221.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAGAATTCCAGTCAATAT	-114771205	False	NA	-18	True	ATTAAA	-16	NA	114780190	114774141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114774373_114779141_114779285_114780109
transcript_91460.known	chr20	-	4627	4	FSM	ENSG00000124225.16	ENST00000265626.8	4627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	90.8074886779719	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGGCTTTTTCACTTCTTTGG	NA	False	NA	0	True	AATAAA	-21	NA	57711536	57648393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_57652599_57653032_57653087_57659542_57659698_57711323
transcript_91461.known	chr20	+	2625	1	FSM	ENSG00000278709.2	ENST00000614771.2	2625	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCTTGTATTTTTCTTTGC	57709595	True	NA	39	True	GATAAA	-44	NA	57710155	57712780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_57710200_57712800
transcript_91463.known	chr20	-	1474	10	FSM	ENSG00000124224.18	ENST00000244070.7	1474	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	12.9252361059697	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTTCTGTGTCGTGTGTTG	-58308598	True	NA	-6	True	ATTAAA	-13	NA	58309439	58245745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58246253_58247321_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_91464.nic	chr20	-	1252	9	ISM	ENSG00000124224.18	ENST00000244070.7	1474	10	-19	1310	-6	0	5prime_fragment	FALSE	canonical	3	29	junction_8	7.95298686029343	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTTTCTCTTACTTTTTGA	-58308617	True	NA	NA	False	ATTAAA	-15	NA	58309458	58247055	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_58247507_58248114_58248274_58250886_58250953_58251756_58251865_58271362_58271506_58272768_58272876_58286313_58286447_58309225_58309271_58309418
transcript_91468.nnic	chr20	-	508	2	NNC	ENSG00000124224.18	novel	4680	10	NA	NA	6271	-1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTATGTCCTGTTCCAT	NA	False	NA	-9	True	AATAAA	-21	NA	58229616	58228940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_58229153_58229320
transcript_91469.nnic	chr20	-	568	2	NNC	ENSG00000124224.18	novel	4680	10	NA	NA	6252	-1	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	75	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACTTATGTCCTGTTCCAT	NA	False	NA	-9	True	AATAAA	-21	NA	58229635	58228940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_58229194_58229320
transcript_9147.known	chr1	-	470	3	FSM	ENSG00000052723.12	ENST00000475335.5	470	3	0	0	0	0	multi-exon	FALSE	canonical	3	429	junction_2	8.5	1011	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAAATCTTGAGATTGTTT	-114771649	True	NA	-19	True	AATAAA	-17	NA	114780634	114779106	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_114779285_114780109_114780216_114780448
transcript_91470.known	chr20	+	8651	7	FSM	ENSG00000124209.4	ENST00000244040.4	8651	7	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_3	6.10100173924104	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTTGCCTCCCAAATGGTT	58308227	True	NA	10	True	AATAAA	-21	NA	58309714	58367507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58310013_58311042_58311123_58343717_58343800_58353272_58353345_58353431_58353539_58354155_58354266_58359605
transcript_91472.known	chr20	+	7829	6	FSM	ENSG00000124164.16	ENST00000475243.6	7829	6	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	10.0876161703348	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGATGCTTCAGTGTAAAATT	58387011	True	NA	13	True	AATAAA	-25	NA	58389228	58451101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58389518_58418210_58418364_58434601_58434706_58438944_58439026_58440906_58441084_58444076
transcript_91475.known	chr20	+	937	4	FSM	ENSG00000124164.16	ENST00000520497.1	937	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	137.681597253308	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAACATTGGTAGGCCTTGGT	58389347	False	NA	132	True	NA	NA	NA	58389365	58444531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58389518_58418210_58418364_58440906_58441084_58444076
transcript_91476.known	chr20	+	1834	3	FSM	ENSG00000124164.16	ENST00000395802.7	1834	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	132.5	970	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGTCATTTTGTCAC	58389294	False	NA	19	True	AATAAA	-17	NA	58389312	58445552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58389518_58418210_58418364_58444076
transcript_91478.known	chr20	+	2191	12	FSM	ENSG00000215440.12	ENST00000356091.11	2191	12	0	0	0	0	multi-exon	FALSE	canonical	3	273	junction_8	71.2515042613427	264	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGGCCTCGTTCTTCTTTC	58690933	True	NA	20	True	ATTAAA	-22	NA	58692799	58715844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58693051_58693736_58693923_58694421_58694593_58698683_58698774_58699196_58699279_58701015_58701159_58707122_58707201_58712478_58712580_58713419_58713544_58713916_58714094_58714559_58714671_58715167
transcript_91485.known	chr20	+	4897	9	FSM	ENSG00000124222.22	ENST00000355957.9	4897	9	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	117.170748802762	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58639361	True	NA	43	True	ATTAAA	-32	NA	58651271	58679526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_91491.known	chr20	+	4937	9	FSM	ENSG00000124222.22	ENST00000371141.8	4937	9	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	122.76902856584	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAATGGGTTCATGTTTTCTT	58639372	True	NA	43	True	ATTAAA	-32	NA	58651282	58679526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652139_58659622_58659635_58667489_58667598_58667986_58668128_58669290_58669454_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_91495.known	chr20	+	942	8	FSM	ENSG00000124222.22	ENST00000467096.5	942	8	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	141.81318553589	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCCGGGTGTGAGGGGCTT	58651757	False	NA	NA	False	NA	NA	NA	58651865	58676328	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58652088_58659622_58659635_58667489_58667598_58667986_58668128_58670511_58670604_58671153_58671298_58673630_58673712_58676186
transcript_91500.known	chr20	-	594	1	FSM	ENSG00000268649.5	ENST00000596276.1	594	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	37	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGATGTTTGCTCTTGTAT	NA	False	NA	0	True	AATAAA	-18	NA	58817725	58817131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58817100_58817700
transcript_91506.known	chr20	+	1800	13	FSM	ENSG00000087460.29	ENST00000472183.6	1800	13	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	1952.68317358165	2686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58840698	False	NA	19	True	AATAAA	-21	NA	58841484	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91509.known	chr20	+	4027	13	FSM	ENSG00000087460.29	ENST00000371100.9	4027	13	0	0	0	0	multi-exon	TRUE	canonical	3	126	junction_1	1958.77148821795	1015	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852397	True	NA	19	True	AATAAA	-21	NA	58852715	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91512.known	chr20	+	1476	13	FSM	ENSG00000087460.29	ENST00000464788.6	1476	13	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_1	1976.72300896374	2511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881092	True	NA	19	True	AATAAA	-21	NA	58889146	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889214_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91513.known	chr20	+	1663	13	FSM	ENSG00000087460.29	ENST00000477931.5	1663	13	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	1883.09252885306	2514	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888800	False	NA	19	True	AATAAA	-21	NA	58889099	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889354_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91514.known	chr20	+	1582	13	FSM	ENSG00000087460.29	ENST00000604005.6	1582	13	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	1968.95443735727	2506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881105	True	NA	19	True	AATAAA	-21	NA	58889159	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889333_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91516.known	chr20	+	1638	13	FSM	ENSG00000087460.29	ENST00000488652.6	1638	13	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	1971.60925529263	2515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58891953	False	NA	19	True	AATAAA	-21	NA	58891980	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58892210_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91517.known	chr20	+	1583	13	FSM	ENSG00000087460.29	ENST00000603546.2	1583	13	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	1980.00153444104	2521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892302	False	NA	19	True	AATAAA	-21	NA	58892332	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58892507_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91519.nnic	chr20	+	1699	12	NNC	ENSG00000087460.29	novel	2503	12	NA	NA	41	0	at_least_one_novel_splicesite	FALSE	canonical	3	130	junction_1	2091.18235368502	2316	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGATGGGACTCCCGTGAG	58833492	False	NA	17	True	AATAAA	-19	NA	58840884	58911190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_58841222_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91521.known	chr20	+	1622	12	FSM	ENSG00000087460.29	ENST00000482112.6	1622	12	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_1	2085.67831881783	2720	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58839224	True	NA	19	True	AATAAA	-21	NA	58841617	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91523.known	chr20	+	3432	12	FSM	ENSG00000087460.29	ENST00000349036.9	3432	12	0	0	0	0	multi-exon	FALSE	canonical	3	126	junction_1	2092.03021326728	958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58852947	False	NA	19	True	AATAAA	-21	NA	58853265	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58855334_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91525.known	chr20	+	1417	12	FSM	ENSG00000087460.29	ENST00000481039.6	1417	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2320.38551228451	2284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888826	True	NA	19	True	AATAAA	-21	NA	58888858	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58888909_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91527.known	chr20	+	1534	12	FSM	ENSG00000087460.29	ENST00000480975.5	1534	12	0	0	0	0	multi-exon	FALSE	canonical	3	505	junction_1	2013.02736532659	1156	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTGAGCAAAGAATGATGGG	58881116	True	NA	6	True	AATAAA	-45	NA	58889170	58911179	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889354_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91529.known	chr20	+	1793	12	FSM	ENSG00000087460.29	ENST00000485673.6	1793	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2318.47548942	2286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58881069	True	NA	19	True	AATAAA	-21	NA	58889123	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58889550_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91531.known	chr20	+	1537	12	FSM	ENSG00000087460.29	ENST00000476935.6	1537	12	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	2105.42180850668	2447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58892006	False	NA	19	True	AATAAA	-21	NA	58892036	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58892210_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_9154.nnic	chr1	-	787	3	Antisense	novelGene_ENSG00000198765.12_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	1	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGCCTCACACCGTTGTCT	-114902510	True	NA	NA	False	AATAAA	-18	NA	114902524	114899012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_114899499_114899829_114899925_114902318
transcript_91549.known	chr20	-	1156	5	FSM	ENSG00000235590.8	ENST00000424094.6	1156	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	16.8874953737966	45	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGACAGAGCCTACTGTGGAT	-58848506	True	NA	-6	True	AATAAA	-33	NA	58850903	58818918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58819256_58841936_58842230_58842432_58842546_58848878_58848918_58850529
transcript_91555.known	chr20	+	812	4	FSM	ENSG00000087460.29	ENST00000493744.5	812	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1087.49283522544	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	58839250	True	NA	21	True	AATAAA	-23	NA	58841643	58900410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58898940_58898986_58899948
transcript_91557.known	chr20	+	2648	4	FSM	ENSG00000087460.29	ENST00000423897.7	2648	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	1094.01127355556	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	58852947	False	NA	21	True	AATAAA	-23	NA	58853265	58900410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58855334_58895611_58895685_58898940_58898986_58899948
transcript_91573.known	chr20	+	1068	3	FSM	ENSG00000087460.29	ENST00000491348.5	1068	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_2	67	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCCTGTATCTCGCGTCTGT	58840556	False	NA	21	True	AATAAA	-23	NA	58841342	58900410	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58841876_58895611_58895685_58899948
transcript_91585.known	chr20	+	2503	12	FSM	ENSG00000087460.29	ENST00000419558.7	2503	12	0	0	0	0	multi-exon	FALSE	canonical	3	1140	junction_2	1865.41719792492	2028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58837130	True	NA	19	True	AATAAA	-21	NA	58839747	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58840887_58895611_58895685_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91586.known	chr20	+	1407	12	FSM	ENSG00000087460.29	ENST00000488546.6	1407	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	2318.66640211513	2289	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	NA	False	NA	19	True	AATAAA	-21	NA	58888778	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58888819_58895611_58895685_58903527_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91587.known	chr20	+	1465	13	FSM	ENSG00000087460.29	ENST00000667293.2	1465	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1984.5167530297	2504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATGGGACTCCCGTGAGTT	58888838	False	NA	19	True	AATAAA	-21	NA	58888848	58911192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58888905_58895611_58895685_58898940_58898986_58903530_58903586_58903671_58903792_58905382_58905481_58909161_58909217_58909349_58909424_58909520_58909580_58909683_58909805_58909950_58910082_58910333_58910402_58910682
transcript_91590.known	chr20	+	2137	16	FSM	ENSG00000101158.15	ENST00000460601.5	2137	16	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_15	116.332206298266	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCTGATGTGACATTGTTT	58973710	True	NA	38	True	AGTAAA	-34	NA	58981274	58995133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641_58994825_58994925
transcript_91596.nic	chr20	+	2165	15	NIC	ENSG00000101158.15	novel	2237	15	NA	NA	-13	0	intron_retention	FALSE	canonical	3	110	junction_13	106.180943945431	495	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973674	True	NA	18	True	AGTAAA	-14	NA	58981238	58995113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993676_58994109_58994240_58994641
transcript_91598.known	chr20	+	2237	15	FSM	ENSG00000101158.15	ENST00000652272.2	2237	15	0	0	0	0	multi-exon	FALSE	canonical	3	392	junction_13	48.041064492276	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTGCTGGGTTGGATTAA	58973691	True	NA	18	True	AGTAAA	-14	NA	58981255	58995113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_58981370_58986092_58986209_58986753_58986864_58987707_58987818_58988913_58989022_58989487_58989641_58989857_58989989_58990909_58991076_58991311_58991447_58991880_58992021_58992997_58993113_58993448_58993545_58993623_58993765_58994109_58994240_58994641
transcript_9162.known	chr1	-	3216	8	FSM	ENSG00000134198.10	ENST00000369516.7	3216	8	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	6.32132768281074	235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCTTGTTTGATTTATCTT	-115088037	True	NA	3	True	ATTAAA	-18	NA	115089503	115048010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_91634.known	chr20	-	7329	4	FSM	ENSG00000101160.15	ENST00000681457.1	7329	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	3.74165738677394	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCGCTGAAGCTTTTGTTA	-59003477	False	NA	NA	False	AATAAA	-14	NA	59004838	58992118	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_58995760_58996638_58996802_58997602_58997754_59001464
transcript_91645.known	chr20	-	3610	3	FSM	ENSG00000124172.10	ENST00000243997.8	3610	3	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_2	177.5	21402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTTTAGTTTTGCTTGTC	-59011449	True	NA	-7	True	AATAAA	-16	NA	59032335	59025474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59028842_59030302_59030430_59032219
transcript_91646.known	chr20	-	1878	2	FSM	ENSG00000124172.10	ENST00000395659.1	1878	2	0	0	0	0	multi-exon	FALSE	canonical	3	4513	junction_1	0	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTTTGTGAGACTTTT	-59011459	True	NA	-5	True	AATAAA	-29	NA	59032345	59028677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59030430_59032219
transcript_91647.known	chr20	-	704	6	FSM	ENSG00000101166.16	ENST00000463057.1	704	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_4	246.32774914735	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTTTTTTTTTTTTTTGA	-59042648	False	NA	-16	True	AATACA	-18	NA	59042732	59034908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59037190_59037300_59038465_59038635_59042698
transcript_91653.known	chr20	-	943	5	FSM	ENSG00000101166.16	ENST00000371033.9	943	5	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_3	261.379991583136	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGACGCCCATTGCCCTG	-59035459	True	NA	NA	False	NA	NA	NA	59042805	59034633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59035127_59036470_59036574_59036689_59036761_59038465_59038635_59042698
transcript_91660.known	chr20	-	612	2	FSM	ENSG00000101166.16	ENST00000466051.1	612	2	0	0	0	0	multi-exon	FALSE	canonical	3	704	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGTTCTGTGGTCAGTGGTG	-59035463	True	NA	NA	False	NA	NA	NA	59042809	59038133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_59038635_59042698
transcript_91663.known	chr20	+	5086	4	FSM	ENSG00000196227.11	ENST00000360816.8	5086	4	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	10.6562449087639	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGGTATTGTTTTGT	59938909	True	NA	23	True	ATTAAA	-23	NA	59940388	59948680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_59940536_59942197_59942310_59942426_59942513_59943939
transcript_91664.nnic	chr20	+	450	4	NNC	ENSG00000196227.11	novel	5086	4	NA	NA	29	707	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_3	30.6521704868604	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGGAGAGAAAAAGACTTTTT	59938938	True	NA	NA	False	AATAAA	-28	NA	59940417	59949387	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_59940536_59942197_59942310_59942426_59942513_59949253
transcript_91667.nnic	chr20	+	1351	8	NNC	ENSG00000124215.17	novel	4602	18	NA	NA	662	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_6	1.66598625567009	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATTTCTATGATTATG	59994849	False	NA	NA	False	AATAAA	-21	NA	59994869	60013113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_59995005_59995832_59996055_59996630_59996762_59999585_59999664_60001342_60001412_60002812_60002867_60006712_60006788_60012526
transcript_91674.known	chr20	+	1429	7	FSM	ENSG00000124215.17	ENST00000497614.1	1429	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	1.63299316185545	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATTTCTATGATTATG	59994187	False	NA	NA	False	AATAAA	-21	NA	59994207	60013113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_59994490_59995832_59996055_59996630_59996762_59999585_59999664_60002812_60002867_60006712_60006788_60012526
transcript_91685.nnic	chr20	+	1364	6	NNC	ENSG00000124215.17	novel	4602	18	NA	NA	684	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	2.33238075793812	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTACATTTCTATGATTATG	59994854	True	NA	NA	False	AATAAA	-21	NA	59994891	60013113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_59995163_59995832_59996055_59996630_59996762_59999585_59999664_60006712_60006788_60012526
transcript_91692.nnic	chr20	+	1360	4	NNC	ENSG00000276627.3	novel	804	3	NA	NA	-4570	-3461	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	2.94392028877595	11	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAAAAAGGAAATTGGA	60750391	True	NA	NA	False	AAAAAG	-8	NA	60750430	60759249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_60750977_60754906_60755161_60756037_60756258_60758909
transcript_91696.known	chr20	-	2733	4	FSM	ENSG00000277270.2	ENST00000671196.1	2733	4	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	1.4142135623731	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACTCTGTCTCCAAAAAAAA	-61437457	False	NA	NA	False	NA	NA	NA	61437477	61432867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_61434876_61434955_61435152_61435702_61435795_61437040
transcript_917.known	chr1	-	1798	15	FSM	ENSG00000127054.22	ENST00000419704.5	1798	15	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_13	137.881511539763	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAGACTACTTGGTACTCT	-1318730	True	NA	-23	True	AGTAAA	-9	NA	1324653	1311605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1311925_1312017_1312148_1312225_1312369_1312439_1312502_1312592_1312701_1312786_1312950_1313034_1313125_1313508_1313593_1313731_1313922_1314300_1314366_1314823_1314963_1315403_1315439_1315519_1315619_1320995_1321094_1324580
transcript_9170.known	chr1	-	793	7	FSM	ENSG00000134198.10	ENST00000369515.6	793	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	37.5044441811012	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACGTATGTTTGGCTCATT	-115088034	True	NA	NA	False	NA	NA	NA	115089500	115050355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115050556_115053378_115053463_115057536_115057609_115058882_115058982_115062134_115062233_115072904_115073008_115089363
transcript_91702.nic	chr20	-	611	3	NIC	ENSG00000277270.2	novel	2733	4	NA	NA	916	40	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	2	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTGTTTTTTTTAATTG	-61436369	True	NA	NA	False	ATTAAA	-19	NA	61436451	61434898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_61435152_61435702_61435795_61436185
transcript_91703.known	chr20	-	4699	15	FSM	ENSG00000130699.20	ENST00000252996.9	4699	15	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_14	5.45342057046468	22	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTTTTGCCTATTTTTCC	-62063402	True	NA	0	True	ATTAAA	-17	NA	62065881	61974797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_61976336_61997549_61997670_61998135_61998193_61998982_61999109_62000123_62000255_62000551_62000722_62003159_62003275_62003730_62003879_62006509_62006759_62007546_62007637_62009051_62009175_62010045_62010166_62012814_62012935_62014546_62014708_62064450
transcript_91708.known	chr20	-	962	7	FSM	ENSG00000101182.15	ENST00000370873.9	962	7	0	0	0	0	multi-exon	TRUE	canonical	3	4096	junction_4	573.471494980836	8027	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGTTTTTTTTTTTAAGAG	-62110908	True	NA	-20	True	AATAAA	-16	NA	62143394	62136732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139780_62139906_62140817_62140945_62143207
transcript_91709.known	chr20	-	685	5	FSM	ENSG00000101182.15	ENST00000442551.5	685	5	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_2	2025.74807170092	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACCTGTTTTTTTTTTTAAG	-62139893	False	NA	-22	True	AATAAA	-14	NA	62139905	62136734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62136950_62137363_62137466_62138170_62138291_62139074_62139198_62139780
transcript_91710.known	chr20	-	1023	7	FSM	ENSG00000101182.15	ENST00000484488.5	1023	7	0	0	0	0	multi-exon	FALSE	canonical	3	259	junction_4	1789.30437290275	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCGATGTGTAGGCCTTTCC	-62110954	True	NA	-4	True	TTTAAA	-23	NA	62143440	62136802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62136950_62137363_62137427_62138170_62138291_62139074_62139198_62139695_62139906_62140817_62140945_62143207
transcript_9172.known	chr1	-	671	7	FSM	ENSG00000134198.10	ENST00000433172.3	671	7	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	33.3087409282042	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCTGTCAATTGTACATT	-115087948	True	NA	NA	False	NA	NA	NA	115089414	115050382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115050556_115057536_115057609_115058882_115058982_115060463_115060539_115062134_115062233_115072904_115073008_115089363
transcript_91724.known	chr20	+	3747	7	FSM	ENSG00000101181.18	ENST00000370823.8	3747	7	0	0	0	0	multi-exon	FALSE	canonical	1	28	junction_3	22.9401394939089	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	62181430	True	NA	16	True	CATAAA	-19	NA	62183027	62203568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62183058_62193415_62193625_62195801_62195950_62197851_62197968_62198633_62198853_62199118_62199258_62200682
transcript_91735.known	chr20	+	667	2	FSM	ENSG00000101181.18	ENST00000466933.1	667	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATGGTGAAACCCTGTCTC	62181431	True	NA	NA	False	NA	NA	NA	62183028	62194053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62183058_62193415
transcript_91736.known	chr20	+	590	2	FSM	ENSG00000101181.18	ENST00000488748.1	590	2	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCAGTGGTTTTTTTGTATG	NA	False	NA	16	True	CATAAA	-19	NA	62202738	62203568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62202844_62203083
transcript_91737.known	chr20	+	3944	14	FSM	ENSG00000130703.17	ENST00000313733.9	3944	14	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_12	18.3280429878182	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGGAAAGTGATGGCCT	62233465	True	NA	7	True	AATAAA	-17	NA	62238520	62296183	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_91739.known	chr20	+	3936	14	FSM	ENSG00000130703.17	ENST00000358053.3	3936	14	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	71.5984033407641	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACGCGTTTGGGTGTGAG	62233465	True	NA	35	True	AATAAA	-45	NA	62238520	62296211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62256056_62256222_62260016_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62289206_62289331_62291702_62291794_62293784
transcript_91741.known	chr20	+	3886	13	FSM	ENSG00000130703.17	ENST00000439951.6	3886	13	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_11	71.6135462046113	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACGCGTTTGGGTGTGAGTA	62233429	True	NA	37	True	NA	NA	NA	62238484	62296213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789_62281880_62284045_62284170_62286582_62286712_62291702_62291794_62293784
transcript_91744.nic	chr20	+	1312	9	ISM	ENSG00000130703.17	ENST00000642516.1	3427	16	-49	12767	-5	0	5prime_fragment	FALSE	canonical	3	251	junction_1	16.3090274081565	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTCTAGGTGGCTTGTTAC	62233444	True	NA	7	True	AATAAA	-18	NA	62238499	62282093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615_62263692_62272124_62272260_62273308_62273407_62279156_62279340_62281057_62281166_62281789
transcript_91748.nic	chr20	+	875	4	ISM	ENSG00000130703.17	ENST00000642932.1	3343	14	-42	30783	-5	4071	5prime_fragment	FALSE	canonical	3	251	junction_1	9.8770215933527	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAAAAATGCACTCTCATG	62233444	True	NA	NA	False	AAAAAG	-1	NA	62238499	62264082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62238598_62256056_62256222_62259980_62260126_62263615
transcript_91757.known	chr20	+	1379	10	FSM	ENSG00000130706.13	ENST00000253003.7	1379	10	0	0	0	0	multi-exon	FALSE	canonical	3	1925	junction_6	217.208098432566	1838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTAGTTTCTTTGCCCAA	62278195	True	NA	19	True	AATAAA	-22	NA	62302996	62308862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62303050_62303567_62303782_62304460_62304578_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_91770.known	chr20	+	1361	9	FSM	ENSG00000130706.13	ENST00000620230.4	1361	9	0	0	0	0	multi-exon	FALSE	canonical	3	249	junction_2	732.059594568639	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGCTTAGTTTCTTTGCCC	62302870	False	NA	17	True	AATAAA	-20	NA	62302895	62308860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62303050_62303567_62303782_62306196_62306321_62306647_62306735_62307370_62307453_62307595_62307829_62308020_62308179_62308367_62308471_62308654
transcript_91791.known	chr20	-	668	1	FSM	ENSG00000273619.1	ENST00000610979.1	668	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	269	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACGAAGTATGGTCGTTG	-62386160	True	NA	-3	True	AGTAAA	-18	NA	62386970	62386302	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62386300_62387000
transcript_91814.known	chr20	+	358	6	FSM	ENSG00000171858.18	ENST00000343986.9	358	6	0	0	0	0	multi-exon	FALSE	canonical	3	4434	junction_5	1373.06649511231	300051	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	62260501	True	NA	14	True	AATAAA	-14	NA	62387102	62388520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308_62388365_62388456
transcript_91815.known	chr20	+	429	5	FSM	ENSG00000171858.18	ENST00000492356.2	429	5	0	0	0	0	multi-exon	FALSE	canonical	3	5559	junction_1	962.731368295435	5228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260521	True	NA	13	True	AATAAA	-13	NA	62387122	62388519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387137_62387320_62387389_62387610_62387675_62387842_62387915_62388308
transcript_91816.known	chr20	+	418	4	FSM	ENSG00000171858.18	ENST00000450116.6	418	4	0	0	0	0	multi-exon	FALSE	canonical	3	7051	junction_3	412.002427177317	1726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTGTGCAGGTTCATTCTG	62260716	False	NA	13	True	AATAAA	-13	NA	62387317	62388519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387389_62387610_62387675_62387842_62387915_62388308
transcript_91817.known	chr20	+	1002	2	FSM	ENSG00000171858.18	ENST00000370562.1	1002	2	0	0	0	0	multi-exon	FALSE	canonical	3	8002	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTGCAGGTTCATTCTGT	62260695	False	NA	14	True	AATAAA	-14	NA	62387296	62388520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62387389_62387610
transcript_91818.known	chr20	-	2585	3	FSM	ENSG00000174403.17	ENST00000475015.5	2585	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAATAAGCGCACAGAAGTGT	-62551482	True	NA	NA	False	AATAAA	-16	NA	62551524	62544546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62546859_62547826_62548001_62551425
transcript_91819.known	chr20	+	2716	12	FSM	ENSG00000101187.16	ENST00000217159.6	2716	12	0	0	0	0	multi-exon	TRUE	canonical	3	118	junction_11	16.1828396000412	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTCCCCGTACCGCGTGCTT	62639808	True	NA	15	True	AATATA	-19	NA	62642502	62672293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62642554_62656358_62657251_62658676_62658768_62660411_62660534_62661063_62661176_62664933_62665089_62666379_62666576_62667744_62667911_62668011_62668185_62668476_62668542_62668929_62669079_62671749
transcript_91828.known	chr20	-	1125	3	FSM	ENSG00000228705.3	ENST00000655940.1	1125	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	-62776908	True	NA	NA	False	AATAAA	-15	NA	62776966	62774120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775480_62776455
transcript_91829.known	chr20	-	758	3	FSM	ENSG00000228705.3	ENST00000689171.1	1906	3	7	1141	-2	0	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	-62776891	True	NA	NA	False	AATAAA	-15	NA	62776949	62774120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775480_62776805
transcript_91830.known	chr20	-	846	3	FSM	ENSG00000228705.3	ENST00000658884.1	846	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CATGTTGTTAATGTGCACAC	NA	False	NA	NA	False	AATAAA	-15	NA	62776996	62774120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775521_62776805
transcript_91831.known	chr20	-	1119	3	FSM	ENSG00000228705.3	ENST00000658688.1	1119	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGTTGTTAATGTGCAC	-62776863	True	NA	NA	False	AATAAA	-13	NA	62776921	62774122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62774570_62775314_62775521_62776455
transcript_91835.known	chr20	+	2410	7	FSM	ENSG00000060491.17	ENST00000290291.10	2410	7	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	10.9455724179028	37	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGGTATGGACCGGGG	62801260	True	NA	19	True	AATAAA	-16	NA	62804834	62814000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62805031_62807536_62807606_62808246_62808326_62809584_62809664_62810498_62810566_62811461_62811611_62812229
transcript_91837.known	chr20	+	2752	5	FSM	ENSG00000101189.7	ENST00000370487.5	2752	5	0	0	0	0	multi-exon	FALSE	canonical	3	221	junction_4	22.0963797939844	67	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGTAACATTTTGCTGC	62792825	True	NA	3	True	AATAAA	-16	NA	62796472	62801729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62796672_62797109_62797232_62798586_62798669_62798974_62799050_62799455
transcript_91842.nic	chr20	+	1303	7	ISM	ENSG00000092758.18	ENST00000466192.5	2194	8	1670	51	-35	-51	3prime_fragment	TRUE	canonical	3	398	junction_1	34.9602949390051	189	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTAATGACTGGCTACAGA	62832797	False	NA	13	True	AATAAA	-20	NA	62832809	62841093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_91843.nic	chr20	+	1369	7	ISM	ENSG00000092758.18	ENST00000466192.5	2194	8	1670	-15	-35	0	3prime_fragment	FALSE	canonical	3	398	junction_1	34.9602949390051	456	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAAGGTCTAGTCTGATGTT	62832797	False	NA	16	True	AATAAA	-32	NA	62832809	62841159	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_62833065_62835920_62835954_62836186_62836334_62836477_62836533_62837082_62837266_62838683_62838762_62840541
transcript_91854.known	chr20	-	2707	6	FSM	ENSG00000101191.17	ENST00000354665.8	2707	6	0	0	0	0	multi-exon	FALSE	canonical	3	106	junction_5	71.5524982093567	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTTAATGCCTTCTGTCTA	-62924357	True	NA	-14	True	TATAAA	-17	NA	62926469	62905004	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62926431
transcript_91855.known	chr20	-	2833	6	FSM	ENSG00000101191.17	ENST00000370371.8	2833	6	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_5	77.6273147803014	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCCTTCTGTCTATAGTGCA	-62932877	True	NA	-7	True	TATAAA	-24	NA	62937952	62904997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62906101_62907146_62907360_62909698_62910021_62910773_62911615_62914209_62914407_62937795
transcript_91862.known	chr20	-	677	1	FSM	ENSG00000273759.1	ENST00000619319.1	677	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	38	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTTGCTAGTGGAGTTC	-62924222	False	5075	0	True	AATAAA	-19	NA	62929297	62928620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_62928600_62929300
transcript_91867.known	chr20	+	4369	5	FSM	ENSG00000101193.8	ENST00000266069.5	4369	5	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	10.0840220150494	545	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTATCTGGAAGCTCTCT	62932523	True	NA	17	True	AGTAAA	-23	NA	62938146	62948475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62938254_62941490_62941621_62942986_62943184_62943494_62943693_62944738
transcript_91868.known	chr20	+	2594	14	FSM	ENSG00000101194.18	ENST00000370349.7	2594	14	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_1	66.1879160926403	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACTGTTATTTTATTTAACA	62950700	True	NA	5	True	ATTAAA	-15	NA	62952706	62968597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62952890_62953210_62953273_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_91869.known	chr20	+	3518	13	FSM	ENSG00000101194.18	ENST00000370351.9	3518	13	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_5	28.9581834528495	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCATGTTTTGTGTATCTGT	62950702	True	NA	5	True	AATAAA	-16	NA	62952708	62969585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_62952890_62956764_62956963_62957440_62957581_62960503_62960604_62962623_62962755_62963272_62963370_62963583_62963681_62964227_62964316_62965131_62965167_62965609_62965726_62966524_62966581_62966702_62966733_62967336
transcript_91875.known	chr20	-	3198	5	FSM	ENSG00000149658.18	ENST00000370339.8	3198	5	0	0	0	0	multi-exon	FALSE	canonical	3	373	junction_4	15.2643375224737	274	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGTGTCACCTCATTCTT	-63209701	True	NA	-3	True	AATAAA	-18	NA	63216131	63195428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63196735_63202286_63203808_63213863_63213944_63215576_63215602_63215865
transcript_91879.nic	chr20	-	1541	7	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-35	0	combination_of_known_junctions	FALSE	canonical	3	8	junction_6	25.7423127684104	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63253450	False	NA	-5	True	AATAAA	-18	NA	63253472	63240783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_91880.known	chr20	-	1353	7	FSM	ENSG00000101198.15	ENST00000370316.8	1353	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	12.8894875339902	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254170	True	NA	-5	True	AATAAA	-18	NA	63254463	63240783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63241507_63242538_63242624_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_91890.known	chr20	-	1421	6	FSM	ENSG00000101198.15	ENST00000370313.5	1421	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	30.958036113423	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63253415	False	NA	-5	True	AATAAA	-18	NA	63253437	63240783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63253217
transcript_91891.nic	chr20	-	1325	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-57	0	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	20.9380037252838	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACTCTGTGGAAGATGCC	-63254227	True	NA	-5	True	AATAAA	-18	NA	63254520	63240783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_91895.nic	chr20	-	875	6	NIC	ENSG00000101198.15	novel	1353	7	NA	NA	-57	43	combination_of_known_junctions	FALSE	canonical	3	27	junction_1	20.9380037252838	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCACATGCCCACCTCCTC	-63254227	True	NA	NA	False	AAAAAG	-31	NA	63254520	63241233	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63241507_63244023_63244085_63247577_63247776_63248814_63248896_63249934_63250073_63254396
transcript_9190.known	chr1	-	998	3	FSM	ENSG00000134259.6	ENST00000681124.1	998	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-115338037	True	NA	-1	True	ATTAAA	-13	NA	115338249	115285916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115286745_115293626_115293751_115338203
transcript_91903.known	chr20	+	3250	13	FSM	ENSG00000101199.13	ENST00000370283.9	3250	13	0	0	0	0	multi-exon	FALSE	canonical	3	313	junction_11	41.709311510341	1377	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGTCTGGATGCATCCCA	63265286	True	NA	18	True	AATAAA	-18	NA	63272812	63289790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63272921_63275576_63275641_63276090_63276201_63276479_63276652_63277204_63277306_63278116_63278204_63278898_63278996_63281290_63281348_63282818_63282852_63284865_63284923_63285653_63285714_63286365_63286443_63287563
transcript_9191.known	chr1	-	1061	3	FSM	ENSG00000134259.6	ENST00000369512.3	1061	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-115338037	True	NA	-1	True	ATTAAA	-13	NA	115338249	115285916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115286808_115293626_115293751_115338203
transcript_91912.nic	chr20	-	1122	8	NIC	ENSG00000075043.20	novel	984	8	NA	NA	-103	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_7	307.772842286287	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGTTCTGTGTGTGGTTTA	-63465586	False	NA	78	True	TTTAAA	-17	NA	63471866	63433680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63471694
transcript_91913.known	chr20	-	1441	8	FSM	ENSG00000075043.20	ENST00000344425.8	1441	8	0	0	0	0	multi-exon	FALSE	canonical	3	760	junction_4	81.8096346803395	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTGTGGTTTATTT	-63466375	True	NA	81	True	TTTAAA	-20	NA	63472655	63433677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63433904_63438624_63438721_63439597_63439709_63442405_63442532_63444658_63444835_63445237_63445365_63446746_63446838_63472167
transcript_91915.known	chr20	-	545	3	FSM	ENSG00000075043.20	ENST00000629318.1	545	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	7.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTCTCTCCCATCTCT	NA	False	NA	-1	True	NA	NA	NA	63415035	63413275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63413582_63414087_63414194_63414902
transcript_91916.known	chr20	-	600	3	FSM	ENSG00000075043.20	ENST00000482957.1	600	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	17	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTCTGTGTGTGGTTTATTT	-63434712	False	NA	81	True	TTTAAA	-20	NA	63434730	63433677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63433904_63434212_63434436_63434579
transcript_91917.known	chr20	+	827	4	FSM	ENSG00000125534.10	ENST00000370179.8	827	4	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	45.0653845971483	2580	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGAGTGTGAGAAATGGCT	63505971	True	NA	13	True	NA	NA	NA	63520764	63522206	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63520895_63521283_63521364_63521511_63521590_63521667
transcript_9192.known	chr1	-	941	2	FSM	ENSG00000134259.6	ENST00000675637.2	941	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGTGTGCTGATGCTGGT	-115338041	True	NA	-1	True	ATTAAA	-13	NA	115338253	115285916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_115286808_115338203
transcript_91920.known	chr20	+	627	3	FSM	ENSG00000125534.10	ENST00000370177.1	627	3	0	0	0	0	multi-exon	FALSE	canonical	3	961	junction_1	11.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGCCCCTCTCCCCACTCCG	63505981	True	NA	NA	False	NA	NA	NA	63520774	63521938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63520895_63521283_63521364_63521511
transcript_91922.known	chr20	+	478	3	FSM	ENSG00000125534.10	ENST00000473620.1	478	3	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_1	506	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCACTCCGCATCCCTCGCC	63505983	True	NA	NA	False	NA	NA	NA	63520776	63521949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63520895_63521511_63521590_63521667
transcript_91923.known	chr20	+	1090	2	FSM	ENSG00000125531.7	ENST00000370097.2	1090	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTATGTTTTAAAGGCAGCA	63554133	True	NA	31	True	AATAAA	-43	NA	63554158	63556695	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63554207_63555653
transcript_91924.known	chr20	-	1827	4	FSM	ENSG00000130589.16	ENST00000370082.1	1827	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	0.816496580927726	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-63573066	True	NA	NA	False	NA	NA	NA	63574239	63570138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63570612_63570684_63570869_63572107_63573222_63574183
transcript_91925.known	chr20	+	801	2	FSM	ENSG00000232442.2	ENST00000449500.2	826	2	25	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGAGGAGTGCTGAGGGGGGC	63626819	True	NA	5	True	AATAAA	-16	NA	63627226	63628824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63627393_63628189
transcript_91926.known	chr20	+	582	2	FSM	ENSG00000232442.2	ENST00000411579.2	614	2	29	3	-1	0	multi-exon	TRUE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTCAGTGCTACTATTTTAT	63626842	True	NA	7	True	AATAAA	-18	NA	63627249	63628707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63627393_63628268
transcript_91927.nnic	chr20	-	1936	6	NNC	ENSG00000197457.10	novel	2248	5	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	111.526499093265	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63650577	True	NA	-15	True	AATAAA	-18	NA	63653445	63639711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63640571_63640903_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_9193.nic	chr1	+	1378	5	ISM	ENSG00000173218.15	ENST00000369509.1	2062	7	12292	435	-7351	-435	3prime_fragment	FALSE	canonical	3	79	junction_1	4.60977222864644	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATATAGAGAGATATATATC	NA	False	NA	NA	False	ATTAAA	-14	NA	115663693	115691419	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_115664269_115682363_115682498_115683943_115684077_115685292_115685528_115691118
transcript_91930.known	chr20	-	2248	5	FSM	ENSG00000197457.10	ENST00000370053.3	2248	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	101.801277005743	254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTTGAACTGTCTGTGT	-63650556	True	NA	-15	True	AATAAA	-18	NA	63653424	63639711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63641398_63642107_63642300_63643755_63643932_63644213_63644310_63653326
transcript_91934.nic	chr20	-	1090	3	ISM	ENSG00000197457.10	ENST00000370053.3	2248	5	-374	3698	-374	346	5prime_fragment	FALSE	canonical	3	164	junction_2	18.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAGGGAGTCTGAGGCAGGG	-63653756	False	NA	NA	False	AATACA	-43	NA	63653798	63643409	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_-_63643932_63644213_63644310_63653326
transcript_91942.known	chr20	-	1623	8	FSM	ENSG00000101246.20	ENST00000618838.4	1623	8	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	64.9565003581282	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704492	True	NA	-2	True	NA	NA	NA	63707838	63699455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707809
transcript_91943.nic	chr20	-	1737	8	NIC	ENSG00000101246.20	novel	1623	8	NA	NA	4	0	intron_retention	FALSE	canonical	3	112	junction_7	42.954175867892	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGGTGTTACTGGGCTGC	-63704663	True	NA	-2	True	NA	NA	NA	63708009	63699455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_91944.known	chr20	-	2456	8	FSM	ENSG00000101246.20	ENST00000619493.4	2456	8	0	0	0	0	multi-exon	TRUE	canonical	3	19	junction_7	72.5354241395336	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTTCTATTTAAAAAAA	-63704507	True	NA	NA	False	TATAAA	-21	NA	63707853	63698642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707809
transcript_91945.known	chr20	-	2518	8	FSM	ENSG00000101246.20	ENST00000622789.5	2518	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_7	57.5052792607526	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTCATTTCTTCTATTTAAA	-63704630	True	NA	NA	False	TATAAA	-17	NA	63707976	63698646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_91949.nic	chr20	-	1635	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	28	0	intron_retention	FALSE	canonical	3	112	junction_7	42.954175867892	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-63704602	True	NA	-27	True	AATAAA	-28	NA	63707948	63699496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_91955.nic	chr20	-	851	8	NIC	ENSG00000101246.20	novel	2518	8	NA	NA	28	-227	combination_of_known_junctions	FALSE	canonical	3	112	junction_7	42.954175867892	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGTAGGCATCCGGAGGCTT	-63704602	True	NA	-4	True	NA	NA	NA	63707948	63700280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_91964.known	chr20	+	1867	7	FSM	ENSG00000197114.12	ENST00000355969.11	1867	7	0	0	0	0	multi-exon	TRUE	canonical	3	89	junction_1	57.3323643328967	198	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705409	True	NA	21	True	ATTAAA	-21	NA	63708038	63736142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708119_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_91968.known	chr20	+	1896	7	FSM	ENSG00000197114.12	ENST00000357119.8	1896	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	90.2140971984608	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705423	True	NA	21	True	ATTAAA	-21	NA	63708052	63736142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733713_63734704_63734825_63735158_63735565_63735780
transcript_91969.known	chr20	+	1945	7	FSM	ENSG00000197114.12	ENST00000328969.5	1945	7	0	0	0	0	multi-exon	FALSE	canonical	2	19	junction_4	92.6300887041211	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTCAGTGGAGATCAGCTGG	63705460	True	NA	20	True	ATTAAA	-20	NA	63708089	63736141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734644_63734825_63735158_63735565_63735780
transcript_91970.known	chr20	+	1890	7	FSM	ENSG00000197114.12	ENST00000369967.7	1890	7	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_1	63.894878946247	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTGGAGATCAGCTGGC	63705456	True	NA	21	True	ATTAAA	-21	NA	63708085	63736142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63708189_63708552_63709165_63733218_63733353_63733586_63733740_63734704_63734825_63735158_63735565_63735780
transcript_91973.known	chr20	-	1061	7	FSM	ENSG00000101246.20	ENST00000607873.1	1061	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	82.3665587480745	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGGAGGAGGCCCGTCAGCC	-63704679	True	NA	NA	False	NA	NA	NA	63708025	63700053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63707866
transcript_91976.known	chr20	-	1612	7	FSM	ENSG00000101246.20	ENST00000618568.4	1612	7	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	85.1971569687367	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCTCCTGGAGGGTGGAG	-63704650	True	NA	-27	True	AATAAA	-28	NA	63707996	63699496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700531_63700601_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_91979.nic	chr20	-	1725	7	NIC	ENSG00000101246.20	novel	1698	7	NA	NA	28	0	intron_retention	FALSE	canonical	3	112	junction_6	46	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-63704602	True	NA	-8	True	NA	NA	NA	63707948	63699477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_9198.known	chr1	+	3670	23	FSM	ENSG00000163399.16	ENST00000295598.10	3670	23	0	0	0	0	multi-exon	FALSE	canonical	3	1827	junction_6	234.341582466124	1734	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGTCTGTGCCCTCGTCGC	116344944	True	NA	23	True	AATAAA	-20	NA	116373243	116404774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_116373524_116384013_116384125_116384782_116384843_116387287_116387492_116388130_116388245_116388637_116388773_116388901_116389020_116389438_116389708_116390212_116390412_116390781_116390892_116392853_116392989_116393530_116393724_116395109_116395286_116396597_116396735_116397887_116398039_116398620_116398790_116398929_116399085_116399419_116399544_116400860_116401007_116401129_116401261_116401553_116401656_116403883_116403976_116404415
transcript_91981.known	chr20	-	1698	7	FSM	ENSG00000101246.20	ENST00000612157.4	1698	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_6	62.0360558241916	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCCTGGCTGTTGGACAC	-63704570	True	NA	-8	True	NA	NA	NA	63707916	63699477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700703_63701829_63701901_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707098_63707866
transcript_91986.known	chr20	-	2554	6	FSM	ENSG00000101246.20	ENST00000614942.4	2554	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	92.985160106331	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTTCTTCTATTTAAAAAAA	-63704667	True	NA	NA	False	TATAAA	-21	NA	63708013	63698642	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63700703_63702135_63702218_63706356_63706440_63706650_63706739_63706998_63707093_63707866
transcript_91990.known	chr20	+	1328	5	FSM	ENSG00000125520.14	ENST00000493772.5	1328	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	88.3469722175016	60	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTCTGCCTCTCGGGA	63741177	True	NA	21	True	ATTAAA	-21	NA	63741251	63743505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63741480_63742129_63742231_63742335_63742616_63742698_63742791_63742878
transcript_9200.known	chr1	+	1728	3	FSM	ENSG00000163399.16	ENST00000488733.1	1728	3	0	0	0	0	multi-exon	FALSE	canonical	3	1887	junction_2	113	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAAAGGAGAGA	116344969	True	NA	NA	False	NA	NA	NA	116373268	116386144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_116373524_116384013_116384125_116384782
transcript_92003.known	chr20	+	2410	4	FSM	ENSG00000203896.10	ENST00000621325.1	2410	4	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	15.1730755689881	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCAGCCTCGCAGCCTGCTC	63736289	False	NA	8	True	AATAAA	-23	NA	63736317	63739103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63737648_63737820_63737903_63738007_63738500_63738597
transcript_92004.known	chr20	+	2339	8	FSM	ENSG00000101150.18	ENST00000352482.8	2339	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	320.195794692522	1066	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857619	True	NA	36	True	AATAAA	-26	NA	63865289	63891545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63887563_63887606_63889189_63889239_63889849
transcript_92006.known	chr20	+	2302	8	FSM	ENSG00000101150.18	ENST00000351424.8	2302	8	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	356.38536812311	1060	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857623	True	NA	36	True	AATAAA	-26	NA	63865293	63891545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63886015_63886043_63887563_63887606_63889189_63889239_63889849
transcript_92010.nnic	chr20	+	949	7	NNC	ENSG00000101150.18	novel	2310	7	NA	NA	-24	-781	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_6	285.631464186517	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTTTTTGGCATTCACTGTC	NA	False	NA	17	True	NA	NA	NA	63865203	63889643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889381
transcript_92011.known	chr20	+	2310	7	FSM	ENSG00000101150.18	ENST00000346249.9	2310	7	0	0	0	0	multi-exon	FALSE	canonical	3	297	junction_4	224.830800578766	1235	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCGCCTCGGCTTGTGTGA	63857599	True	NA	29	True	AATAAA	-19	NA	63865269	63891538	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889189_63889239_63889849
transcript_92019.known	chr20	+	2237	6	FSM	ENSG00000101150.18	ENST00000348257.9	2237	6	0	0	0	0	multi-exon	FALSE	canonical	3	406	junction_3	154.484173946719	1190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857619	True	NA	36	True	AATAAA	-26	NA	63865289	63891545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63882718_63882821_63889189_63889239_63889849
transcript_9202.known	chr1	-	3099	3	FSM	ENSG00000203865.12	ENST00000493908.2	3099	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATTGGATGGTCTCCTGTG	-116418473	True	NA	NA	False	NA	NA	NA	116418635	116396628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116399315_116400895_116401132_116418458
transcript_92024.known	chr20	+	2197	5	FSM	ENSG00000101150.18	ENST00000611972.4	2197	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	345.650112107605	1069	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857557	True	NA	36	True	AATAAA	-26	NA	63865227	63891545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63889189_63889239_63889849
transcript_92027.known	chr20	+	2310	6	FSM	ENSG00000101150.18	ENST00000615907.4	2310	6	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_5	274.325645902821	1059	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGGCTTGTGTGATGTATCG	63857557	True	NA	36	True	AATAAA	-26	NA	63865227	63891545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63865385_63869295_63869442_63873667_63873817_63875815_63875876_63882718_63882821_63889849
transcript_9203.known	chr1	-	4746	2	FSM	ENSG00000203865.12	ENST00000674823.1	4746	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	451	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATCAAGATCTTGTTCCTAA	-116418463	True	NA	NA	False	NA	NA	NA	116418625	116401569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116406149_116418458
transcript_92030.known	chr20	+	5287	6	FSM	ENSG00000101152.11	ENST00000470551.1	5287	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_4	28.1040922287129	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTATGTCTTACTCGCTAGT	63894436	True	NA	36	True	AATAAA	-41	NA	63895181	63936031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63895324_63928334_63928453_63929311_63929526_63930850_63931023_63931108_63931183_63931464
transcript_92038.known	chr20	-	1838	15	FSM	ENSG00000198276.16	ENST00000354216.11	1838	15	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_14	154.899243091127	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63953829	True	NA	NA	False	AATAAA	-21	NA	63956416	63939828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63943652_63943670_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_9204.known	chr1	-	301	2	FSM	ENSG00000203865.12	ENST00000676321.1	301	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GATCCAGAAAAATTGGGATA	-116418413	True	NA	NA	False	AATAAA	-24	NA	116418575	116413729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116413914_116418458
transcript_92048.known	chr20	-	1845	13	FSM	ENSG00000198276.16	ENST00000358711.7	1845	13	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_6	170.301611527574	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAAAAATGAAGGTGTGATT	-63953798	True	NA	NA	False	AATAAA	-10	NA	63956385	63939839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941209_63944396_63944459_63944544_63944735_63945650_63945723_63945804_63945976_63946160_63946268_63946452_63946644_63956259
transcript_9205.known	chr1	-	1828	3	FSM	ENSG00000203865.12	ENST00000369492.5	1828	3	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCCGGGTGTTCCTTTTTT	-116418421	True	NA	-4	True	TATAAA	-17	NA	116418583	116404713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116406149_116406927_116407196_116418458
transcript_92052.nnic	chr20	-	1288	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	157.240878519395	259	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941775	False	NA	NA	False	AATAAA	-21	NA	63941799	63939828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941109_63941209_63941382
transcript_92053.nnic	chr20	-	1262	8	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-190	0	at_least_one_novel_splicesite	FALSE	canonical	3	31	junction_7	190.484987892077	187	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941775	False	NA	NA	False	AATAAA	-21	NA	63941799	63939828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135_63941209_63941382
transcript_92055.nnic	chr20	-	1420	7	NNC	ENSG00000198276.16	novel	1838	15	NA	NA	-174	0	at_least_one_novel_splicesite	FALSE	canonical	3	89	junction_6	146.579898576396	181	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTGTGATTGGTTACAGCAC	-63941759	False	NA	NA	False	AATAAA	-21	NA	63941783	63939828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr20_-_63940056_63940149_63940307_63940377_63940486_63940593_63940717_63940793_63940857_63940949_63941044_63941135
transcript_92059.known	chr20	+	3047	21	FSM	ENSG00000101161.8	ENST00000266079.5	3047	21	0	0	0	0	multi-exon	TRUE	canonical	3	542	junction_11	84.1808172923024	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGGCAGCCTGCTGGTTTTC	63969835	True	NA	23	True	ATTAAA	-24	NA	63981131	64033100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_63981317_63983046_63983216_63984906_63985026_63993406_63993486_63994915_63995093_63995326_63995483_63999044_63999140_63999602_63999760_64001076_64001240_64010199_64010319_64011284_64011504_64016722_64016846_64022756_64022879_64024554_64024694_64025938_64026059_64026981_64027159_64027602_64027737_64028477_64028570_64029376_64029492_64031917_64032045_64032840
transcript_9206.known	chr1	+	584	2	FSM	ENSG00000163399.16	ENST00000463382.1	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	1982	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTTGTTTTGTATTCAGGT	116387157	True	NA	NA	False	AATAAA	-14	NA	116387302	116388525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_116387492_116388130
transcript_9207.known	chr1	-	1086	6	FSM	ENSG00000116815.16	ENST00000369489.10	1086	6	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	18.661189672687	307	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTAGGTGGTTTGGCTACTGT	-116569727	True	NA	-1	True	AATAAA	-22	NA	116571026	116514533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116514823_116519230_116519268_116521905_116521984_116535964_116536229_116544310_116544605_116570902
transcript_92070.nic	chr20	+	530	3	ISM	ENSG00000101161.8	ENST00000266079.5	3047	21	-56	48074	-56	-48074	5prime_fragment	FALSE	canonical	3	623	junction_1	34	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAAGAAATTGTTGCCTTT	63969779	True	NA	NA	False	GATAAA	-31	NA	63981075	63985026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr20_+_63981317_63983046_63983216_63984906
transcript_92072.nic	chr20	+	1198	11	NIC	ENSG00000171703.17	novel	1182	10	NA	NA	3	0	combination_of_known_junctions	FALSE	canonical	2	27	junction_2	141.666686274508	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	64060530	True	NA	16	True	ATTAAA	-16	NA	64063239	64072347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_+_64063385_64063891_64063950_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_92074.known	chr20	+	1182	10	FSM	ENSG00000171703.17	ENST00000343484.10	1182	10	0	0	0	0	multi-exon	FALSE	canonical	2	182	junction_6	68.7336961588297	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGTTCTCCTCAGCCGTT	64060488	True	NA	16	True	ATTAAA	-16	NA	64063197	64072347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64063385_64066475_64066539_64066914_64067021_64068046_64068135_64069360_64069492_64069764_64069822_64070259_64070415_64070488_64070636_64071869_64071942_64072171
transcript_92079.known	chr20	+	421	2	FSM	ENSG00000171703.17	ENST00000476113.1	421	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGACTTAGCCCGCAGC	64060486	True	NA	8	True	AATAAA	-17	NA	64063195	64064123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64063385_64063891
transcript_9208.known	chr1	-	892	4	FSM	ENSG00000116815.16	ENST00000369487.3	892	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_3	4.49691252107735	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTTTTGCTTTACGTGTGT	-116569740	True	NA	NA	False	AATAAA	-36	NA	116571039	116521786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116521984_116535964_116536229_116544310_116544605_116570902
transcript_92081.known	chr20	-	1619	6	FSM	ENSG00000171700.14	ENST00000395042.2	1619	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	26.8432486856565	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64079436	False	NA	-1	True	TTTAAA	-6	NA	64079518	64073180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079293
transcript_92083.known	chr20	-	1510	6	FSM	ENSG00000171700.14	ENST00000332298.9	1510	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	27.9899982136477	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64079906	False	82	-1	True	TTTAAA	-6	NA	64079988	64073180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64076856_64076955_64079872
transcript_92086.nnic	chr20	-	1381	5	NIC	ENSG00000171700.14	novel	1510	6	NA	NA	31	0	combination_of_known_splicesites	FALSE	canonical	3	15	junction_4	39.5434887181189	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTCTACTCATTTTTGTCC	-64078812	True	NA	-1	True	TTTAAA	-6	NA	64079957	64073180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr20_-_64074045_64074143_64074379_64074466_64074542_64076524_64076647_64079872
transcript_92090.known	chr20	+	3859	6	FSM	ENSG00000203880.12	ENST00000308824.11	3859	6	0	0	0	0	multi-exon	FALSE	canonical	3	290	junction_1	50.2633066958393	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGAGAAGTGGCTGGC	64252785	True	NA	10	True	AATAAA	-18	NA	64255747	64276226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr20_+_64255871_64259941_64260273_64264428_64264532_64265257_64265430_64267886_64268011_64273220
transcript_92094.known	chr21	+	1162	7	FSM	ENSG00000277117.5	ENST00000612610.4	1162	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	5.28099317258495	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAGGAAAAAAGTCTGCATT	NA	False	NA	NA	False	AATAAA	-14	NA	5022492	5040661	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5022694_5025008_5025050_5026279_5026631_5027934_5028226_5032052_5032218_5033407_5033444_5040584
transcript_92095.known	chr21	-	3188	21	FSM	ENSG00000275464.5	ENST00000617716.4	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_20	102.023661471249	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	-5154644	False	NA	NA	False	ATTAAA	-16	NA	5154658	5130870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5131456_5133425_5133501_5133654_5133806_5133901_5134121_5135088_5135155_5135934_5136044_5137326_5137475_5139697_5139879_5140952_5141104_5141276_5141425_5141558_5141708_5142531_5142669_5143221_5143293_5144090_5144235_5146136_5146367_5146657_5146794_5147288_5147433_5147778_5147879_5148209_5148305_5152960_5153074_5154622
transcript_92097.nnic	chr21	-	1023	8	NNC	ENSG00000280071.4	novel	1584	7	NA	NA	-51	-2	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	362.611502907473	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTGTGCTGCATTCATC	-5123750	True	NA	NA	False	AATAAA	-15	NA	5128464	5116342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_5116482_5117135_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_9210.known	chr1	-	7326	12	FSM	ENSG00000143061.18	ENST00000369483.5	7326	12	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	29.6528119442043	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATTTACTGCAGTCTTCTA	-116664090	True	NA	-6	True	AGTAAA	-24	NA	116667755	116574398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_116577563_116579391_116579878_116584644_116585053_116588693_116589105_116599940_116600346_116603623_116604026_116606491_116606552_116607941_116608332_116613764_116614176_116616079_116616458_116666283_116666957_116667617
transcript_92102.known	chr21	-	1584	7	FSM	ENSG00000280071.4	ENST00000620528.5	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	304.574429874429	595	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	-5123655	True	NA	NA	False	AATAAA	-17	NA	5128369	5116340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5117232_5118690_5118848_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_9211.known	chr1	+	6314	9	FSM	ENSG00000134247.10	ENST00000393203.3	6314	9	0	0	0	0	multi-exon	FALSE	canonical	3	58	junction_3	9.78439446261239	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAAGTTGTGTGAGGAGCT	116909090	True	NA	9	True	ATTAAA	-17	NA	116909915	116990353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_116910253_116941714_116942084_116944678_116945093_116949191_116949573_116961242_116961669_116966910_116967331_116974215_116974324_116984679_116984986_116986800
transcript_92114.known	chr21	-	898	6	FSM	ENSG00000280071.4	ENST00000624120.3	898	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	405.577810043893	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGGGATGTTTCTTCCTGGG	-5123658	True	NA	NA	False	NA	NA	NA	5128372	5116936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5117232_5118690_5118848_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_92118.known	chr21	-	696	6	FSM	ENSG00000280071.4	ENST00000624648.3	696	6	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	314.561663271289	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCCCTGGCAGGTGAACCAC	-5128258	False	NA	NA	False	ATTAAA	-21	NA	5128273	5120633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_92124.known	chr21	-	781	5	FSM	ENSG00000280071.4	ENST00000623810.2	781	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	386.512936394113	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	-5123699	True	NA	NA	False	ATTAAA	-19	NA	5128413	5120635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5120890_5121710_5121804_5124755_5124876_5125878_5125993_5128213
transcript_92126.known	chr21	-	807	5	FSM	ENSG00000280071.4	ENST00000624714.3	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	742	junction_1	58.3630876496438	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	-5123664	True	NA	NA	False	NA	NA	NA	5128378	5121448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5121804_5124755_5124876_5125878_5125993_5127897_5127951_5128213
transcript_9213.nnic	chr1	-	1068	2	NNC	ENSG00000236137.1	novel	1814	4	NA	NA	-550	-30168	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	21	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAGCAGATCATTCTAAGAA	-117059933	True	NA	NA	False	ATTAAA	-23	NA	117060040	117056464	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_117056865_117059372
transcript_92132.nnic	chr21	-	936	3	NNC	ENSG00000279094.3	novel	936	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_1	15.5	302	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	5502553	5499150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_5499810_5499998_5500091_5502368
transcript_92133.known	chr21	-	936	3	FSM	ENSG00000279094.3	ENST00000624261.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	37.5	340	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	5502542	5499150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5499810_5499998_5500102_5502368
transcript_92134.nnic	chr21	-	972	3	NNC	ENSG00000279094.3	novel	936	3	NA	NA	-9	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	3.5	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	5502551	5499150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_5499810_5499998_5500129_5502368
transcript_92135.known	chr21	-	977	3	FSM	ENSG00000279094.3	ENST00000624859.3	977	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	40.5	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTAATGTCTGCTTTTCATGA	NA	False	NA	NA	False	ATTAAA	-13	NA	5502497	5499154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_5499968_5500066_5500102_5502368
transcript_92145.known	chr21	+	549	3	FSM	ENSG00000274333.4	ENST00000619252.4	549	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGCCCGGGCTCCCTAACA	NA	False	NA	NA	False	NA	NA	NA	5553636	5590200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5553839_5585822_5585988_5590018
transcript_92149.nnic	chr21	+	997	2	NNC	ENSG00000274333.4	novel	560	4	NA	NA	0	-29313	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	5553658	5557056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_5553839_5556239
transcript_92150.known	chr21	+	835	2	FSM	ENSG00000274333.4	ENST00000623436.3	835	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTATAGAGCCGGGTTTGCG	NA	False	NA	NA	False	NA	NA	NA	5553668	5590683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5553839_5590018
transcript_92154.known	chr21	+	2195	2	FSM	ENSG00000274333.4	ENST00000611026.1	2195	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATTGTGTCTCAAATTACTTT	NA	False	NA	NA	False	AATAAA	-15	NA	5585777	5592003	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_5585988_5590018
transcript_92155.known	chr21	-	2380	4	FSM	ENSG00000275496.4	ENST00000621924.4	2380	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.88561808316413	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTGTCTCAAATTACTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	6267304	6228965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6234982_6235148_6254790_6254850_6267134
transcript_92156.known	chr21	-	859	3	FSM	ENSG00000275496.4	ENST00000617746.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	2	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	6267275	6230398	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6234982_6235148_6267134
transcript_92159.nnic	chr21	-	720	3	NNC	ENSG00000275496.4	novel	859	3	NA	NA	-11	-137	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAAATGATTTCTTTGTTTC	NA	False	NA	NA	False	AATAAA	-17	NA	6267291	6229103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_6229229_6230513_6230952_6267134
transcript_9216.known	chr1	+	9439	23	FSM	ENSG00000116830.12	ENST00000369466.9	9439	23	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_10	24.4646819140782	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCTGAAATCAGATTCATTA	117053866	True	NA	29	True	AATAAA	-22	NA	117060325	117107453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179_117076295_117076640_117076824_117077915_117078044_117079567_117079650_117081827_117081948_117084017_117084169_117086416_117086523_117088800_117088983_117090054_117090209_117090531_117090624_117091327_117091411_117091816_117091951_117092730_117092902_117095308_117095368_117096148_117096300_117097350_117097434_117098832_117098908_117101379
transcript_92160.known	chr21	-	465	2	FSM	ENSG00000275496.4	ENST00000624446.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTCATCTCAAGACAATT	NA	False	NA	NA	False	NA	NA	NA	6267313	6230665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6230952_6267134
transcript_92163.nnic	chr21	-	969	2	NNC	ENSG00000275496.4	novel	2380	4	NA	NA	-6	-31320	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	0	19	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6267286	6263916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_6264734_6267134
transcript_92177.nnic	chr21	+	797	4	FSM	ENSG00000278903.4	ENST00000692046.1	725	4	-70	-2	4	0	multi-exon	FALSE	canonical	3	20	junction_3	16.4181471413663	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6318405	6329955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320882_6320975_6322599_6322698_6329547
transcript_92179.nnic	chr21	+	593	4	FSM	ENSG00000278903.4	ENST00000692237.1	523	4	-70	0	4	0	multi-exon	FALSE	canonical	2	7	junction_3	22.3755819291179	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6318405	6353289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320882_6320975_6322599_6322698_6353085
transcript_92183.nnic	chr21	+	615	4	NNC	ENSG00000278903.4	novel	801	5	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	19.5675468285856	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6318421	6353289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_6318605_6320844_6320975_6322599_6322698_6353085
transcript_92188.nnic	chr21	+	1493	2	ISM	ENSG00000278903.4	ENST00000692318.1	488	3	-22	-794	4	-72	intron_retention	FALSE	canonical	3	59	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGCTTATTTTTCATTGTAT	NA	False	NA	NA	False	AAAACA	-5	NA	6318405	6322176	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_6318605_6320882
transcript_92189.known	chr21	+	767	3	FSM	ENSG00000278903.4	ENST00000688828.1	1395	3	97	531	0	-105	multi-exon	FALSE	canonical	3	13	junction_2	46.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGATTATTTATTAAATT	NA	False	NA	NA	False	AATAAA	-16	NA	6318494	6321717	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6318605_6320871_6320975_6321163
transcript_92190.known	chr21	-	1992	18	FSM	ENSG00000274276.5	ENST00000624934.3	1992	18	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	722.23252493169	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCACAGAGCATCCGTCTCC	-6467432	False	NA	NA	False	NA	NA	NA	6467532	6445432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445662_6447735_6447778_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_92195.known	chr21	-	2514	17	FSM	ENSG00000274276.5	ENST00000398168.6	2495	17	-19	0	0	0	multi-exon	FALSE	canonical	3	500	junction_10	514.548284906286	3255	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467432	False	NA	NA	False	TATAAA	-14	NA	6467532	6444868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467447
transcript_92198.known	chr21	-	2353	18	FSM	ENSG00000274276.5	ENST00000618024.4	2353	18	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_17	680.644163648415	2824	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-6467940	False	NA	NA	False	TATAAA	-14	NA	6468040	6444868	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6445326_6445539_6445662_6448480_6448566_6449822_6449932_6450511_6450647_6450903_6450982_6452118_6452225_6453988_6454074_6454630_6454757_6455577_6455670_6456880_6456951_6457064_6457200_6457293_6457374_6457920_6458056_6460186_6460294_6463662_6463880_6464943_6465020_6467902
transcript_9220.nic	chr1	+	1548	6	ISM	ENSG00000116830.12	ENST00000369466.9	9439	23	-42	31064	-42	0	5prime_fragment	FALSE	canonical	3	209	junction_1	14.7594037819961	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTCCATTTTATTATCTG	117053824	True	NA	6	True	AATAAA	-20	NA	117060283	117076389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_117060375_117060454_117060558_117062386_117062474_117073660_117073728_117074869_117075860_117076179
transcript_9221.known	chr1	+	849	5	FSM	ENSG00000116830.12	ENST00000470935.1	849	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	96.1327207562545	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGGGAGGCTAAAGAAACAA	117053902	True	NA	NA	False	NA	NA	NA	117060361	117075444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117060375_117060454_117060562_117062386_117062474_117073660_117073728_117074869
transcript_92235.known	chr21	-	813	8	FSM	ENSG00000275895.7	ENST00000619610.2	813	8	0	0	0	0	multi-exon	FALSE	canonical	3	2360	junction_5	1551.68765266357	360	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCATAAGGGGAATTTTTTTT	-6492970	False	NA	NA	False	NA	NA	NA	6499202	6484708	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6493043_6493111_6495992_6496081_6499128
transcript_92236.known	chr21	-	945	8	FSM	ENSG00000275895.7	ENST00000610664.5	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	3771	junction_6	907.400638289034	27193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-6493016	True	NA	NA	False	AATAAA	-20	NA	6499248	6484622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6495992_6496081_6499128
transcript_92237.known	chr21	-	963	9	FSM	ENSG00000275895.7	ENST00000620065.4	963	9	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_6	1980.24613369147	15558	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTCTTGGTGTAACTTAT	-6492970	False	NA	NA	False	AATAAA	-17	NA	6499202	6484625	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6492198_6493043_6493111_6495992_6496081_6499128
transcript_92238.known	chr21	-	4715	7	FSM	ENSG00000275895.7	ENST00000624739.1	4715	7	0	0	0	0	multi-exon	FALSE	canonical	3	4210	junction_5	692.133416811143	84	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATGGGTTTCTGAATAAAA	-6493029	True	NA	NA	False	TTTAAA	-26	NA	6499261	6484660	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6484917_6486137_6486231_6486321_6486456_6487106_6487206_6487362_6487413_6492130_6496081_6499128
transcript_92247.nnic	chr21	-	833	5	Fusion	ENSG00000280145.3_ENSG00000278878.1	novel	674	2	NA	NA	-52	-1479	multi-exon	FALSE	canonical	0	0	junction_1	22.6757028557	33	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6670747	6635836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_-_6636041_6665039_6665253_6666428_6666527_6668151_6668244_6670521
transcript_92253.known	chr21	-	596	4	FSM	ENSG00000280145.3	ENST00000623313.1	596	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	22.4251842554055	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AACGAGCAGCTTTTGTTAGA	NA	False	NA	NA	False	NA	NA	NA	6670642	6632152	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6632438_6666428_6666527_6668151_6668244_6670521
transcript_92255.nnic	chr21	-	620	4	Fusion	ENSG00000280145.3_ENSG00000278878.1	novel	674	2	NA	NA	-52	-1479	multi-exon	FALSE	canonical	2	7	junction_1	20.5426385841741	78	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6670747	6635836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_-_6636041_6666428_6666527_6668151_6668244_6670521
transcript_92256.nnic	chr21	-	605	4	Fusion	ENSG00000280145.3_ENSG00000278878.1	novel	674	2	NA	NA	-26	-1479	multi-exon	FALSE	canonical	2	7	junction_1	37.6061460697879	84	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTTTGAGATCCTCAAAGAT	NA	False	NA	NA	False	AATAAA	-17	NA	6670721	6635836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_-_6636041_6666428_6666527_6668151_6668255_6670521
transcript_92258.nnic	chr21	-	824	4	NIC	ENSG00000280145.3	novel	785	4	NA	NA	-52	8133	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	13.9602610609146	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6670747	6659170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6659579_6666428_6666527_6668151_6668244_6670521
transcript_92259.nnic	chr21	-	809	4	NIC	ENSG00000280145.3	novel	785	4	NA	NA	-26	8133	combination_of_known_splicesites	FALSE	canonical	3	21	junction_1	32.2628096868343	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6670721	6659170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6659579_6666428_6666527_6668151_6668255_6670521
transcript_92264.known	chr21	-	897	3	FSM	ENSG00000278878.1	ENST00000623225.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18	219	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6670667	6667303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6667963_6668151_6668244_6670521
transcript_92265.known	chr21	-	936	3	FSM	ENSG00000280145.3	ENST00000623324.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	41.5	317	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6670695	6667303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6667963_6668151_6668255_6670521
transcript_92278.nic	chr21	-	1521	2	ISM	ENSG00000280145.3	ENST00000623313.1	596	4	-105	34796	-52	355	5prime_fragment	FALSE	canonical	3	52	junction_1	0	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATTTTTCATTGTATA	NA	False	NA	NA	False	AAAAAG	-1	NA	6670747	6666948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_6668244_6670521
transcript_92279.known	chr21	-	674	2	FSM	ENSG00000278878.1	ENST00000624181.1	674	2	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACATATTTATTAAAATTT	NA	False	NA	NA	False	AATAAA	-15	NA	6670650	6667709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6668255_6670521
transcript_92282.known	chr21	+	1032	3	FSM	ENSG00000280164.1	ENST00000623892.1	1032	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.5	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTCTGCTTTTCATGAGTG	NA	False	NA	NA	False	ATTAAA	-16	NA	6721811	6725209	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_6721992_6724258_6724294_6724392
transcript_92284.known	chr21	-	710	5	FSM	ENSG00000280018.4	ENST00000623165.3	710	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	22.1062773890133	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCCGTTGATGTTACGTCCC	NA	False	NA	NA	False	NA	NA	NA	6997699	6986449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6986649_6992109_6992323_6993498_6993597_6995221_6995314_6997591
transcript_92286.nnic	chr21	-	781	4	NIC	ENSG00000280018.4	novel	710	5	NA	NA	-9	209	combination_of_known_splicesites	FALSE	canonical	3	19	junction_1	14.9888847706114	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTGCCTCATGCATTTG	NA	False	NA	NA	False	AATAAA	-19	NA	6997774	6986240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_6986649_6993498_6993597_6995221_6995314_6997591
transcript_92289.known	chr21	-	897	3	FSM	ENSG00000280018.4	ENST00000623347.1	897	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	18.5	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6997737	6994373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6995033_6995221_6995314_6997591
transcript_9229.known	chr1	-	3536	6	FSM	ENSG00000134253.10	ENST00000256649.9	3536	6	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_4	10.777754868246	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120449	True	NA	-14	True	AATAAA	-22	NA	117121749	117111059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118033_117118768_117120713
transcript_92292.nic	chr21	-	1478	2	ISM	ENSG00000280018.4	ENST00000624519.1	681	3	-34	862	-9	355	5prime_fragment	FALSE	canonical	3	53	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCTTATTTTTCATTGTATA	NA	False	NA	NA	False	AAAAAG	-1	NA	6997774	6994018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_6995314_6997591
transcript_92293.known	chr21	-	936	3	FSM	ENSG00000280018.4	ENST00000624728.1	936	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	42	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGCTTTTCATGACTGC	NA	False	NA	NA	False	ATTAAA	-17	NA	6997765	6994373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_6995033_6995221_6995325_6997591
transcript_92295.known	chr21	+	859	3	FSM	ENSG00000277067.4	ENST00000621909.4	859	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	4	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATGTCAGTAGTTTTGGGA	NA	False	NA	NA	False	NA	NA	NA	7048919	7085797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7049061_7081048_7081214_7085244
transcript_9230.known	chr1	-	3495	6	FSM	ENSG00000134253.10	ENST00000369464.7	3495	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	31.4922212617656	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTGAAATCTGCATTGTA	-117120462	True	NA	-14	True	AATAAA	-22	NA	117121762	117111059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117112454_117113358_117113486_117115574_117115690_117116615_117116746_117118087_117118768_117120713
transcript_92301.known	chr21	+	2247	4	FSM	ENSG00000276077.4	ENST00000625096.3	2247	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	2.35702260395516	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGATTTCTTTGTTTCTACAT	NA	False	NA	NA	False	AATAAA	-22	NA	7430668	7468875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7430839_7443124_7443184_7462826_7462992_7467022
transcript_92303.known	chr21	+	994	3	FSM	ENSG00000276077.4	ENST00000624461.3	994	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAGTCAGGAAAAAGCGTCT	NA	False	NA	NA	False	NA	NA	NA	7430729	7467742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7430839_7462826_7462992_7467022
transcript_92309.known	chr21	+	843	4	FSM	ENSG00000273590.5	ENST00000619874.5	870	4	24	3	4	-2	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	1472	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	7744974	7758627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7758104
transcript_9231.nic	chr1	+	1331	2	ISM	ENSG00000198162.12	ENST00000356554.7	8576	13	-46	126439	-46	-18197	5prime_fragment	FALSE	canonical	3	57	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAAGAGGTAATAAGCTGA	117367384	False	NA	28	True	NA	NA	NA	117367402	117402433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_117368486_117402185
transcript_92310.known	chr21	+	1193	5	FSM	ENSG00000273590.5	ENST00000622934.3	1193	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	88.3130086680326	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATGTATCTTGTTTTACAG	NA	False	NA	NA	False	AATAAA	-22	NA	7744970	7772246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7745039_7748898_7748988_7754951_7755119_7769186_7769376_7771566
transcript_92311.known	chr21	+	1021	4	FSM	ENSG00000273590.5	ENST00000612624.4	1021	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	81.3428956127495	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	7744982	7772253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7745039_7748898_7748988_7769186_7769376_7771566
transcript_92312.known	chr21	+	1074	4	FSM	ENSG00000273590.5	ENST00000624758.3	1074	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.4445906431483	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	7745074	7758629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_7745368_7748898_7748988_7754951_7755119_7758104
transcript_92315.known	chr21	+	2498	7	FSM	ENSG00000278996.1	ENST00000623664.1	2498	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	45.790889438354	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTCTAAGTGTGTGTTCCC	NA	False	NA	NA	False	AATAAA	-18	NA	8197619	8227646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8197928_8200737_8201053_8222960_8223058_8223184_8224186_8224346_8224439_8226173_8226392_8227179
transcript_92317.nnic	chr21	+	793	3	NNC	ENSG00000278996.1	novel	2498	7	NA	NA	4698	-3933	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	58.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8202317	8223713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8202485_8222960_8223058_8223184
transcript_92318.nnic	chr21	+	974	3	NNC	ENSG00000278996.1	novel	2498	7	NA	NA	7301	-3933	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	62.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8204920	8223713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8205269_8222960_8223058_8223184
transcript_9232.known	chr1	+	8576	13	FSM	ENSG00000198162.12	ENST00000356554.7	8576	13	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_9	6.56378955583841	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTTGTTTAGCCTTCATT	117366270	True	NA	15	True	AATAAA	-20	NA	117367448	117528872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117368486_117402185_117402442_117405548_117405646_117414712_117414832_117420568_117420650_117442230_117442326_117460488_117460613_117466333_117466428_117493146_117493263_117496762_117496983_117499381_117499555_117502854_117502971_117522824
transcript_92324.nnic	chr21	+	1005	3	NNC	ENSG00000278996.1	novel	2498	7	NA	NA	24569	-3933	at_least_one_novel_splicesite	FALSE	canonical	3	63	junction_1	32	69	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	8222164	False	NA	NA	False	AATAAA	-15	NA	8222188	8223713	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8222568_8222960_8223058_8223184
transcript_92327.known	chr21	+	153	1	FSM	ENSG00000277739.1	ENST00000610460.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	NA	False	NA	NA	False	GGGGCT	-19	NA	8256780	8256933	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8256800_8256900
transcript_9233.known	chr1	+	5654	2	FSM	ENSG00000183508.5	ENST00000369448.4	5654	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATTTGTTTCTTCTCAAT	117605821	True	NA	NA	False	AATAAA	-42	NA	117606047	117628389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117606154_117622841
transcript_92330.nnic	chr21	+	952	4	NNC	ENSG00000280441.3	novel	2498	7	NA	NA	49046	231	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	47.7935374524864	61	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	8429691	False	NA	NA	False	AATAAA	-15	NA	8429711	8450899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8429901_8449636_8449774_8450146_8450244_8450370
transcript_92334.nnic	chr21	+	806	3	NNC	ENSG00000280441.3	novel	2520	7	NA	NA	4686	231	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	58.5	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGGTGTGAACGTTTCTC	NA	False	NA	NA	False	AATAAA	-15	NA	8385351	8406712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_8385532_8405959_8406057_8406183
transcript_92348.known	chr21	+	153	1	FSM	ENSG00000278189.1	ENST00000619471.1	153	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGCCGATCAATCGCCCCC	NA	False	NA	NA	False	GGGGCT	-19	NA	8439822	8439975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8439800_8440000
transcript_92349.known	chr21	+	479	1	FSM	ENSG00000286267.1	ENST00000650962.1	479	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTGCTGACGGACATTTGC	NA	False	NA	NA	False	AATAAA	-32	NA	8417756	8418235	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8417800_8418200
transcript_9235.nic	chr1	-	2314	15	NIC	ENSG00000196505.11	novel	8819	14	NA	NA	-23	105	combination_of_known_junctions	FALSE	canonical	3	13	junction_2	17.7449331658709	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAATTACCTGAGTCCAAGA	-117928385	True	NA	74	True	TATAAA	-23	NA	117929644	117870078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_117870617_117877775_117877842_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_92350.known	chr21	+	333	1	FSM	ENSG00000286032.1	ENST00000651130.1	333	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTGGGGTGGCTTCTCCCTC	NA	False	NA	NA	False	AATAAA	-16	NA	8465253	8465586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_8465300_8465600
transcript_92354.nnic	chr21	+	918	4	FSM	ENSG00000224905.8	ENST00000690295.1	905	4	-17	4	-17	-4	multi-exon	FALSE	canonical	2	6	junction_3	12.5521135891752	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAACTGCCTAAGTACGCTT	14026549	True	NA	NA	False	AATAAA	-14	NA	14027397	14124620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14113338_14113379_14124137
transcript_92355.nnic	chr21	+	1068	4	FSM	ENSG00000224905.8	ENST00000690295.1	905	4	-17	-146	-17	146	multi-exon	FALSE	canonical	2	6	junction_3	12.5521135891752	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTTCGGTCTCTCTTAT	14026549	True	NA	4	True	AATAAA	-14	NA	14027397	14124770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14113338_14113379_14124137
transcript_92359.known	chr21	+	553	3	FSM	ENSG00000224905.8	ENST00000653756.2	578	3	25	0	19	0	multi-exon	FALSE	canonical	0	0	junction_2	17	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTAAAATTTTCTTCATTGA	14026591	True	NA	NA	False	AAAAAG	-20	NA	14027439	14088783	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14088583
transcript_92360.known	chr21	+	812	3	FSM	ENSG00000224905.8	ENST00000448463.3	816	3	4	0	-2	0	multi-exon	FALSE	canonical	1	2	junction_2	16	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTAGTCTAAAATGCAGTTT	14026570	True	NA	NA	False	NA	NA	NA	14027418	14089046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14088608
transcript_92364.nnic	chr21	+	927	3	NNC	ENSG00000224905.8	novel	578	3	NA	NA	-17	572	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	14	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGAGTTAAAGTCTGTT	14026549	True	NA	6	True	AATATA	-27	NA	14027397	14089618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_14027598_14083949_14084145_14089086
transcript_92367.known	chr21	+	1332	3	FSM	ENSG00000224905.8	ENST00000428809.5	1332	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	14.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	14026572	True	NA	NA	False	AATAAA	-27	NA	14027420	14144468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14143508
transcript_92368.known	chr21	+	1084	3	FSM	ENSG00000224905.8	ENST00000432621.5	1084	3	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	15	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACCTTTTTGAGATTCTAAT	14026572	True	NA	NA	False	AATAAA	-27	NA	14027420	14144468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14027598_14083949_14084145_14143756
transcript_92377.known	chr21	+	1955	5	FSM	ENSG00000185272.14	ENST00000400577.4	1955	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	4.54835134966506	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	14215767	True	NA	NA	False	AATAAA	-18	NA	14216156	14228372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14219562_14219726_14221096_14221170_14224437_14224538_14226879
transcript_92382.known	chr21	+	680	5	FSM	ENSG00000185272.14	ENST00000468788.5	680	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_4	6.49519052838329	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGCTCCACTTCCTAATAGT	14215755	True	NA	NA	False	TATAAA	-44	NA	14216144	14227054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226858
transcript_92384.known	chr21	+	1992	5	FSM	ENSG00000185272.14	ENST00000468643.5	1992	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	4.92442890089805	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGAGTAACTGAATTTTAAT	14215740	True	NA	NA	False	AATAAA	-18	NA	14216129	14228372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14219552_14219726_14221096_14221170_14224437_14224538_14226879
transcript_92398.known	chr21	+	1597	4	FSM	ENSG00000185272.14	ENST00000495055.1	1597	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	6.12825877028341	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGTTTATAGCTCATTA	14215763	True	NA	NA	False	AATAAA	-13	NA	14216152	14228173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14216283_14221096_14221170_14224437_14224538_14226879
transcript_9240.known	chr1	-	8819	14	FSM	ENSG00000196505.11	ENST00000369443.10	8819	14	0	0	0	0	multi-exon	TRUE	canonical	3	37	junction_1	9.44996164796075	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGGGCTCAACTTAGCATTA	-117928362	True	NA	-21	True	AGTAAA	-16	NA	117929621	117863484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117870617_117878008_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_92402.known	chr21	+	2747	6	FSM	ENSG00000243064.9	ENST00000467409.6	2796	6	49	0	2	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAAGAAAAGAA	NA	False	NA	NA	False	NA	NA	NA	14273890	14301386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_14274158_14279595_14279658_14287549_14287698_14288403_14288547_14291569_14291748_14299437
transcript_92403.known	chr21	-	3945	5	FSM	ENSG00000155304.6	ENST00000285667.4	3945	5	0	0	0	0	multi-exon	TRUE	canonical	3	173	junction_4	14.5150783669948	57	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATGTACTTTTTCATTCAG	-14379773	True	NA	-2	True	AATAAA	-27	NA	14383146	14371114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_14374285_14375651_14375820_14378198_14378413_14381202_14381544_14383094
transcript_92410.nnic	chr21	-	800	7	NNC	ENSG00000155307.19	novel	1151	7	NA	NA	-531	-347	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_4	16.9877406777162	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGCTCTTAAATTTCCT	-14616377	True	NA	NA	False	AATAAA	-17	NA	14616547	14592276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_14592640_14594012_14594079_14602022_14602100_14609481_14609569_14612875_14612914_14615975_14616017_14616419
transcript_92414.nnic	chr21	-	431	4	NNC	ENSG00000155307.19	novel	220	3	NA	NA	-614	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	16.739839372653	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	14616630	14612504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_14612646_14612875_14612914_14615975_14616017_14616419
transcript_92416.nnic	chr21	-	661	3	NNC	ENSG00000155307.19	novel	450	2	NA	NA	-614	0	intron_retention	FALSE	canonical	3	41	junction_2	0.5	12	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	NA	False	NA	NA	False	AATAAA	-17	NA	14616630	14612504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_14612914_14615975_14616017_14616419
transcript_92418.nnic	chr21	-	305	3	NNC	ENSG00000155307.19	novel	450	2	NA	NA	-614	-356	at_least_one_novel_splicesite	FALSE	canonical	3	41	junction_2	0.5	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTTACAAGTGTAAACGATG	NA	False	NA	-4	True	AATAAA	-23	NA	14616630	14612860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_14612914_14615975_14616017_14616419
transcript_92419.known	chr21	-	220	3	FSM	ENSG00000155307.19	ENST00000469393.5	220	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	18	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	-14615846	False	NA	NA	False	AATAAA	-17	NA	14616016	14612504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_14612646_14612875_14612914_14615975
transcript_92420.known	chr21	-	450	2	FSM	ENSG00000155307.19	ENST00000467280.1	450	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTCATTATAAAAGTCTCT	-14615846	False	NA	NA	False	AATAAA	-17	NA	14616016	14612504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_14612914_14615975
transcript_92422.nnic	chr21	-	616	2	Genic_Genomic	ENSG00000226580.1	novel	146	1	NA	NA	-11773	227	multi-exon	FALSE	canonical	3	8	junction_1	0	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATATTTCTCAAAGCACCG	-17512501	True	NA	NA	False	AATAAA	-18	NA	17512597	17500451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_-_17500805_17512334
transcript_92425.known	chr21	+	1445	8	FSM	ENSG00000154639.19	ENST00000400169.1	1445	8	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_7	375.103305498523	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTTAGTTAAATACATTGA	17481591	False	NA	-23	True	TTTAAA	-29	NA	17513129	17593579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427_17565612_17593151
transcript_92431.known	chr21	+	5593	7	FSM	ENSG00000154639.19	ENST00000284878.12	5593	7	0	0	0	0	multi-exon	FALSE	canonical	3	1008	junction_6	86.3243238542237	878	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGCCTCATGGTGTGGC	17481504	True	NA	2	True	AATAAA	-15	NA	17513042	17570100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17560701_17560825_17561337_17561477_17565427
transcript_9244.known	chr1	-	2436	13	FSM	ENSG00000196505.11	ENST00000369442.3	2436	13	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_1	7.26244143216009	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTCTCTAACATTTCTCT	-117928324	True	NA	0	True	AATAAA	-16	NA	117929583	117877221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_117878153_117881822_117881878_117883487_117883628_117886576_117886654_117887697_117887775_117896832_117896990_117899056_117899217_117906505_117906583_117911993_117912083_117912529_117912684_117918596_117918737_117920181_117920425_117929447
transcript_92442.known	chr21	+	1080	5	FSM	ENSG00000154639.19	ENST00000400166.5	1080	5	0	0	0	0	multi-exon	TRUE	canonical	3	179	junction_4	450.09721172209	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATCGAAATAGTTACAGGC	17481507	True	NA	NA	False	AATATA	-24	NA	17513045	17565852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_17513173_17547026_17547194_17551748_17551954_17558975_17559132_17565427
transcript_92448.known	chr21	-	1485	6	FSM	ENSG00000154640.15	ENST00000339775.10	1485	6	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_3	81.5033741632823	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612844	17593652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17594333_17598616_17598825_17604144_17604277_17604859_17604998_17608971_17609153_17612698
transcript_92452.known	chr21	-	1410	5	FSM	ENSG00000154640.15	ENST00000348354.7	1410	5	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_2	23.0908531674341	120	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACGCGTGTTTCTGTTGTG	NA	False	NA	-1	True	AATAAA	-19	NA	17612901	17593652	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17594333_17598616_17598825_17604859_17604998_17608971_17609153_17612698
transcript_92458.known	chr21	-	1593	5	FSM	ENSG00000154642.11	ENST00000400559.7	1593	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	55.8854855933095	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGAGTTGTTTTAATTTCT	-17816025	True	NA	0	True	GATAAA	-19	NA	17819386	17792803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17793579_17795207_17795271_17796581_17797119_17818191_17818326_17819302
transcript_92461.known	chr21	-	1090	4	FSM	ENSG00000154642.11	ENST00000400558.7	1090	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	54.6260011349907	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTCTAGGGCTAATCATT	-17816025	True	NA	-17	True	AATAAA	-19	NA	17819386	17793246	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_17793582_17796581_17797119_17818191_17818326_17819302
transcript_92471.nnic	chr21	+	591	2	Genic_Genomic	ENSG00000198618.5	novel	498	1	NA	NA	-46	217	multi-exon	FALSE	canonical	0	0	junction_1	0	748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAGCAATTACTTAGAAAAT	18761729	True	NA	3	True	AATAAA	-25	NA	18857732	18858493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_+_18857969_18858138
transcript_92472.known	chr21	+	498	1	FSM	ENSG00000198618.5	ENST00000358455.4	498	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	624	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTGACTTGTGTTTTATCT	18761775	True	NA	NA	False	NA	NA	NA	18857778	18858276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_18857800_18858300
transcript_92474.known	chr21	-	3229	6	FSM	ENSG00000228592.2	ENST00000655729.1	3229	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	112.136702287877	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAACAATGGCTTATTCTGGA	-23381549	True	NA	NA	False	AATAAA	-30	NA	23384800	23352928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_23355415_23362024_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_92481.known	chr21	-	1784	5	FSM	ENSG00000228592.2	ENST00000262354.5	1784	5	0	0	0	0	multi-exon	FALSE	canonical	3	238	junction_1	25.9939896899264	731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAAATTGCCCAGTCTCAAGT	-23384898	False	NA	NA	False	ATTAAA	-14	NA	23384920	23361103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_23362240_23364037_23364194_23372326_23372449_23372947_23373085_23384687
transcript_92495.known	chr21	-	2848	4	FSM	ENSG00000228592.2	ENST00000654898.1	2848	4	0	0	0	0	multi-exon	FALSE	canonical	3	272	junction_1	14.7044966667418	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAAAATAATGACAATAAAA	-23381595	True	NA	NA	False	AAAAAG	-22	NA	23384846	23361763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_23364194_23372326_23372449_23372947_23373085_23384687
transcript_92508.known	chr21	-	1306	3	FSM	ENSG00000229962.2	ENST00000658909.1	1306	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTGTGATGATTATTTTT	NA	False	NA	NA	False	AATAAA	-23	NA	25518558	25515348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25516456_25518275_25518348_25518431
transcript_9251.known	chr1	+	10004	27	FSM	ENSG00000065183.16	ENST00000349139.6	10004	27	0	0	0	0	multi-exon	TRUE	canonical	3	159	junction_1	59.5951454478194	66	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTTCCTCACTCGTGTAA	117920309	True	NA	8	True	AATAAA	-24	NA	117929738	117966543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_117929783_117933287_117933491_117934472_117934683_117936768_117936888_117938479_117938559_117939476_117939573_117940826_117940941_117941123_117941226_117941749_117941848_117942436_117942545_117943395_117943627_117946085_117946180_117948404_117948507_117949750_117949837_117949994_117950131_117950833_117950891_117951975_117952077_117952296_117952409_117952527_117952663_117952945_117952997_117953475_117953542_117954006_117954100_117954579_117954628_117955314_117955359_117957067_117957197_117958909_117959004_117959291
transcript_92517.known	chr21	-	1074	10	FSM	ENSG00000154719.14	ENST00000352957.9	1074	10	0	0	0	0	multi-exon	FALSE	canonical	3	765	junction_1	95.5496122182698	6318	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTTGTGTGTGCTTATACA	-25603904	True	NA	NA	False	AATAAA	-20	NA	25607481	25585655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25585755_25588834_25588883_25592811_25592966_25593892_25593959_25597301_25597415_25599798_25599867_25601367_25601468_25603795_25603936_25606448_25606656_25607402
transcript_92519.known	chr21	+	1757	10	FSM	ENSG00000154721.15	ENST00000400532.5	1757	10	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_9	13.1909059582729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATAAGATTTATGTTTCTTTA	25639199	True	NA	NA	False	AATAAA	-16	NA	25639271	25714573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714230
transcript_92520.known	chr21	+	4351	10	FSM	ENSG00000154721.15	ENST00000480456.6	4351	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_3	8.20568908339411	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGAACTTGTTAAACTTTT	25639185	True	NA	20	True	AATAAA	-5	NA	25639257	25717562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25639889_25683882_25683949_25689865_25689974_25693755_25693909_25698676_25698880_25702169_25702270_25705978_25706087_25709433_25709450_25712339_25712383_25714639
transcript_92522.known	chr21	+	5120	10	FSM	ENSG00000154727.11	ENST00000354828.7	5120	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	43.7275515599959	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	NA	False	NA	3	True	AATAAA	-15	NA	25734569	25772460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25735071_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_92528.known	chr21	+	5226	10	FSM	ENSG00000154727.11	ENST00000400075.4	5226	10	0	0	0	0	multi-exon	FALSE	canonical	3	121	junction_1	22.6323269290239	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTCTGTGTTGCTTAAAA	25734256	True	NA	3	True	AATAAA	-15	NA	25734971	25772460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_25735579_25741572_25741676_25745209_25745355_25749035_25749121_25751988_25752235_25758009_25758205_25762311_25762366_25764209_25764351_25764594_25764788_25769003
transcript_92547.known	chr21	-	589	5	FSM	ENSG00000154723.13	ENST00000400094.5	589	5	0	0	0	0	multi-exon	FALSE	canonical	3	111	junction_4	3051.77672635139	4617	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708768	True	NA	-6	True	AATAAA	-38	NA	25734904	25724479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734332_25734376_25734852
transcript_92558.known	chr21	-	589	4	FSM	ENSG00000154723.13	ENST00000457143.6	589	4	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_3	2932.40481516451	4315	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25708897	True	NA	-6	True	AATAAA	-38	NA	25735033	25724479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734938
transcript_92560.known	chr21	-	647	4	FSM	ENSG00000154723.13	ENST00000400090.7	647	4	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_3	2928.66640109264	4016	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25734166	True	NA	-6	True	AATAAA	-38	NA	25735639	25724479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735486
transcript_92563.known	chr21	-	526	4	FSM	ENSG00000154723.13	ENST00000284971.8	526	4	0	0	0	0	multi-exon	FALSE	canonical	3	5795	junction_1	434.822824710121	56794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTTCTTGATGAATTGA	-25708768	True	NA	-26	True	AATAAA	-18	NA	25734904	25724499	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734852
transcript_92564.known	chr21	-	1179	4	FSM	ENSG00000154723.13	ENST00000400093.3	1179	4	0	0	0	0	multi-exon	FALSE	canonical	3	177	junction_3	2896.89331679454	5149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25735655	False	NA	-6	True	AATAAA	-38	NA	25735673	25724479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25734988
transcript_92565.known	chr21	-	826	4	FSM	ENSG00000154723.13	ENST00000400087.7	826	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	2929.13369824974	3820	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTGTGTTAGAGTTGT	-25734173	True	NA	-6	True	AATAAA	-38	NA	25735646	25724479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_25724678_25725225_25725351_25729630_25729802_25735314
transcript_92569.known	chr21	-	735	4	FSM	ENSG00000166265.13	ENST00000400043.3	735	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	157.726204403566	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTAAGTTTCACCCTGGAA	-26568681	True	NA	NA	False	NA	NA	NA	26573176	26477970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_26478136_26480271_26480430_26566265_26566369_26572867
transcript_92570.known	chr21	-	3072	4	FSM	ENSG00000166265.13	ENST00000299340.9	3072	4	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_1	80.129062559515	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCATTGTCTTGTGTCCA	-26568760	True	NA	-5	True	AATAAA	-31	NA	26573255	26466208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_26468632_26480271_26480430_26566265_26566369_26572867
transcript_92571.known	chr21	-	3099	4	FSM	ENSG00000166265.13	ENST00000652641.2	3099	4	0	0	0	0	multi-exon	FALSE	canonical	3	100	junction_1	122.817841628251	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTATATTTTCATTGTCTT	-26568791	True	NA	-12	True	AATAAA	-24	NA	26573286	26466215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_26468635_26480271_26480430_26566265_26566369_26572867
transcript_92580.nnic	chr21	-	838	3	NNC	ENSG00000166265.13	novel	3072	4	NA	NA	2	-86427	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	184	8	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAGGCAGTTATAACTGA	-26568679	True	NA	1	True	AATAAA	-17	NA	26573174	26564397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_26564826_26566265_26566369_26572867
transcript_92581.nic	chr21	-	647	2	ISM	ENSG00000166265.13	ENST00000400043.3	735	4	-1	88061	-1	-88061	5prime_fragment	FALSE	canonical	3	397	junction_1	0	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTTATTCTTTTATTGTTT	-26568682	True	NA	NA	False	AATAAA	-28	NA	26573177	26566031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_26566369_26572867
transcript_92582.known	chr21	-	1293	7	FSM	ENSG00000156239.12	ENST00000460212.1	1293	7	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	30.9659310999829	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883886	True	NA	-10	True	AATAAA	-17	NA	28885371	28872190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28872740_28876311_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_92583.nic	chr21	-	1238	6	NIC	ENSG00000156239.12	novel	1293	7	NA	NA	-29	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	39.3883231427793	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883915	False	NA	-10	True	AATAAA	-17	NA	28885400	28872190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_28872740_28876311_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_92585.known	chr21	-	4861	6	FSM	ENSG00000156239.12	ENST00000303775.10	4861	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_3	15.4272486205415	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883882	True	NA	-10	True	AATAAA	-17	NA	28885367	28872190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28876492_28878191_28878334_28879869_28879954_28882159_28882251_28882984_28883072_28885211
transcript_92586.known	chr21	-	4781	5	FSM	ENSG00000156239.12	ENST00000351429.7	4781	5	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_2	32.2722791262099	98	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCAGTGTGTACGCGTGCC	-28883886	True	NA	-10	True	AATAAA	-17	NA	28885371	28872190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_28876492_28878191_28878334_28882159_28882251_28882984_28883072_28885211
transcript_92592.nic	chr21	-	1708	10	ISM	ENSG00000198862.14	ENST00000389195.7	2714	13	43	5567	-29	11	5prime_fragment	FALSE	canonical	3	93	junction_6	12.1360599297006	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTAAGGTTAGATTTGCTG	-28988273	True	NA	NA	False	AGTAAA	-9	NA	28992906	28966883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_28967180_28969465_28969602_28970551_28970743_28971270_28971445_28981118_28981300_28982315_28982369_28984691_28984923_28986138_28986238_28986730_28986935_28992763
transcript_92595.known	chr21	-	1789	6	FSM	ENSG00000156253.7	ENST00000486719.5	1789	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_4	42.5788679981044	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018215	True	NA	0	True	AATAAA	-16	NA	29019350	29005758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29009594_29009693_29019210
transcript_92598.known	chr21	-	3065	5	FSM	ENSG00000156253.7	ENST00000493196.2	3065	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_3	23.092206477511	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTAGTTTTATAAGTTT	-29018214	True	NA	NA	False	CATAAA	-15	NA	29019349	29004383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29006652_29007760_29008124_29008239_29008308_29008394_29008622_29019210
transcript_92604.known	chr21	-	1787	4	FSM	ENSG00000156253.7	ENST00000472184.1	1787	4	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_2	12.2836838484589	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018224	True	NA	0	True	AATAAA	-16	NA	29019359	29005758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29006652_29007760_29008124_29008239_29008622_29019210
transcript_92605.known	chr21	-	1625	4	FSM	ENSG00000156253.7	ENST00000286777.6	1625	4	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_2	44.1537717024894	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018217	True	NA	0	True	AATAAA	-16	NA	29019352	29005758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29006652_29007760_29008124_29008394_29008622_29019210
transcript_92611.nnic	chr21	-	1266	3	NIC	ENSG00000156253.7	novel	1625	4	NA	NA	3	0	combination_of_known_splicesites	FALSE	canonical	2	8	junction_1	58	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTAGGCTTTTTTTTTAA	-29018221	True	NA	0	True	AATAAA	-16	NA	29019356	29005758	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_29006652_29008394_29008622_29019210
transcript_92614.known	chr21	-	842	2	FSM	ENSG00000156253.7	ENST00000466746.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAATATTCTAGAGTGGGCA	-29018171	True	NA	NA	False	NA	NA	NA	29019306	29007875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29008622_29019210
transcript_92616.known	chr21	+	3004	19	FSM	ENSG00000156256.15	ENST00000334352.8	3004	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	38.9093993531729	112	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022576	True	NA	7	True	AATAAA	-17	NA	29024650	29054488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29024778_29025708_29025772_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_92618.known	chr21	+	2924	18	FSM	ENSG00000156256.15	ENST00000399976.7	2924	18	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_5	19.9483762813663	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29022593	True	NA	7	True	AATAAA	-17	NA	29024667	29054488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037275_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_92620.known	chr21	+	2960	18	FSM	ENSG00000156256.15	ENST00000399975.7	2960	18	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_5	19.6206232860092	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGTTTTATTACTGGGAA	29024534	False	NA	7	True	AATAAA	-17	NA	29024628	29054488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29024778_29027872_29027975_29030594_29030774_29034836_29034941_29036270_29036375_29037278_29037464_29038334_29038431_29039025_29039157_29039480_29039569_29040608_29040688_29042012_29042105_29042471_29042529_29043422_29043600_29046666_29047322_29048760_29048856_29050091_29050179_29053801_29053959_29054065
transcript_92645.known	chr21	-	636	1	FSM	ENSG00000273254.1	ENST00000608809.1	636	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTGTTTGTTTGAGACG	-29024866	True	NA	NA	False	AATAAA	-16	NA	29024890	29024254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29024300_29024900
transcript_92656.known	chr21	-	1872	15	FSM	ENSG00000156261.13	ENST00000470450.5	1872	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	858.206367004666	3042	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTATTGTCTAATGACCACG	-29043691	True	NA	-14	True	AATAAA	-21	NA	29073639	29056323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073505
transcript_92662.known	chr21	-	1854	15	FSM	ENSG00000156261.13	ENST00000286788.9	1854	15	0	0	0	0	multi-exon	FALSE	canonical	3	2789	junction_9	253.92233265392	14990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTATTGTCTAATGACCA	-29043700	True	NA	-16	True	AATAAA	-19	NA	29073648	29056325	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_29056553_29060540_29060661_29061252_29061418_29061495_29061568_29062127_29062244_29062327_29062416_29062489_29062557_29063351_29063531_29064967_29065106_29066715_29066778_29066890_29067072_29067555_29067706_29069422_29069503_29070246_29070338_29073530
transcript_92663.known	chr21	+	5618	5	FSM	ENSG00000156273.16	ENST00000286800.8	5618	5	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_1	24.5153013442625	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAGAATTGTACATTCCATTT	29297252	True	NA	13	True	AATAAA	-27	NA	29298921	29346148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_29298954_29321220_29321515_29326058_29327394_29329486_29329694_29342398
transcript_92666.nnic	chr21	+	853	3	Genic_Genomic	ENSG00000186971.3	novel	797	1	NA	NA	-3284	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTCACATTGTTAT	30426928	True	NA	NA	False	AATAAA	-23	NA	30426945	30431026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_+_30427107_30427349_30427437_30430421
transcript_92667.nnic	chr21	+	782	2	Genic_Genomic	ENSG00000186971.3	novel	797	1	NA	NA	-2970	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATTGTTCACATTGTTAT	30427242	False	NA	NA	False	AATAAA	-23	NA	30427259	30431026	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_+_30427437_30430421
transcript_9267.known	chr1	-	2811	6	FSM	ENSG00000116874.12	ENST00000369426.9	2811	6	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	39.3314123824711	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-119139485	True	NA	-3	True	ACTAAA	-20	NA	119140648	119031215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_119033389_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_92674.known	chr21	+	865	5	FSM	ENSG00000142168.15	ENST00000389995.4	865	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	1207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634473	True	NA	60	True	ATTAAA	-22	NA	31659665	31668931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_31659785_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_92689.known	chr21	-	520	1	FSM	ENSG00000273271.1	ENST00000609934.1	520	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCGTTTTAAGTGTCCCCATT	-31667220	False	NA	0	True	AATAAA	-16	NA	31667247	31666727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_31666700_31667200
transcript_92690.known	chr21	+	895	5	FSM	ENSG00000142168.15	ENST00000270142.11	895	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1175.24750052914	35352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGCTCTGATACTTATTTA	31634500	True	NA	60	True	ATTAAA	-22	NA	31659692	31668931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_31659842_31663789_31663887_31666448_31666519_31667257_31667376_31668470
transcript_9270.known	chr1	-	2787	6	FSM	ENSG00000116874.12	ENST00000235521.5	2787	6	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	10.4115320678563	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGTTTATCTGTTTGT	-119139490	True	NA	-3	True	ACTAAA	-20	NA	119140653	119031215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076349_119076608_119140554
transcript_92703.known	chr21	-	1546	5	FSM	ENSG00000159055.4	ENST00000290130.4	1546	5	0	0	0	0	multi-exon	FALSE	canonical	3	1311	junction_1	7.0178344238091	3132	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTTTAAGATTGATTTTT	-32269316	True	NA	-22	True	AATAAA	-13	NA	32279049	32268227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32269118_32269706_32269804_32270406_32270530_32274829_32274897_32278680
transcript_92704.known	chr21	-	10818	39	FSM	ENSG00000142207.7	ENST00000382751.4	10818	39	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_27	28.5947421701682	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGCCTCGGATATGTCTT	-32386812	True	NA	NA	False	ATTAAA	-21	NA	32393012	32311017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32315100_32316465_32317066_32317675_32317918_32319216_32319415_32320530_32320641_32321800_32321945_32322477_32322585_32324490_32324603_32325228_32325390_32333316_32333420_32334162_32334335_32337093_32337158_32337403_32337515_32338706_32338901_32341465_32341525_32344569_32344757_32345373_32345576_32346955_32347812_32349303_32349484_32350703_32350923_32352709_32352907_32353932_32354104_32354858_32354998_32355448_32355566_32357536_32357657_32359795_32359909_32361006_32361124_32361891_32362022_32363155_32363330_32366617_32366756_32368402_32368599_32372506_32372632_32373646_32373773_32375397_32375484_32378444_32378542_32383421_32383555_32384312_32384465_32385544_32385685_32392768
transcript_92705.known	chr21	+	831	1	FSM	ENSG00000256073.3	ENST00000534991.3	831	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	218	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGCTGGTACATATTTTAA	32392801	True	NA	NA	False	AATAAA	-24	NA	32393129	32393960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32393100_32394000
transcript_92709.known	chr21	-	4781	8	FSM	ENSG00000265590.10	ENST00000673807.1	4781	8	0	0	0	0	multi-exon	FALSE	canonical	2	16	junction_3	492.281237024661	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCCAGAGCAAACATATA	-32612478	False	NA	NA	False	NA	NA	NA	32612865	32573784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_92711.known	chr21	-	3883	7	FSM	ENSG00000265590.10	ENST00000673945.1	3883	7	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	472.715823724994	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCTACGGCAGGAAATTTG	-32612148	False	NA	NA	False	AATAAA	-13	NA	32612535	32574136	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32576924_32578693_32578832_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_92713.known	chr21	+	492	5	FSM	ENSG00000166979.13	ENST00000496615.5	492	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	3.76662979332984	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTGGTCATCAGAGAGT	32493565	False	NA	NA	False	NA	NA	NA	32493652	32514880	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32493763_32495026_32495171_32501414_32501496_32503925_32504016_32514813
transcript_92715.nnic	chr21	-	754	4	ISM	ENSG00000265590.10	ENST00000673672.1	3979	5	1138	2919	-83	1143	3prime_fragment	FALSE	canonical	2	16	junction_3	3.29983164553722	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAGACCTAGTAATTTATTAA	-32602908	False	NA	NA	False	AATAAA	-24	NA	32603295	32576658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_32576924_32578693_32578832_32582199_32582416_32603160
transcript_9273.nnic	chr1	-	1172	6	NNC	ENSG00000116874.12	novel	2787	6	NA	NA	-17	619	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	35.1761282690406	25	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTGTCTGAATCCCCAATTA	-119139508	True	NA	-15	True	AATAAA	-14	NA	119140671	119032677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_119033360_119034094_119034214_119042263_119042350_119045581_119045663_119076520_119076608_119140554
transcript_92734.known	chr21	-	2503	5	FSM	ENSG00000159079.19	ENST00000382549.8	2503	5	0	0	0	0	multi-exon	FALSE	canonical	3	926	junction_3	73.8816621361485	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32609960	True	NA	89	True	AATAAA	-19	NA	32612586	32601666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_92735.known	chr21	-	1082	6	FSM	ENSG00000159079.19	ENST00000440966.5	1082	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	390.038664750048	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTAAATCGTTTTTGTTT	-32602577	True	NA	89	True	AATAAA	-19	NA	32612352	32601666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32601974_32603160_32603293_32604124_32604284_32607648_32607717_32609837_32610006_32612104
transcript_92736.known	chr21	-	1243	6	FSM	ENSG00000159079.19	ENST00000300260.7	1243	6	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	430.379646358886	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCACTTACTGCCCTCTGT	-32612216	False	NA	-29	True	TTTAAA	-12	NA	32612603	32601784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32601974_32602271_32602368_32603160_32603293_32604124_32604284_32609837_32610006_32612104
transcript_92737.known	chr21	-	863	5	FSM	ENSG00000159079.19	ENST00000458138.1	863	5	0	0	0	0	multi-exon	FALSE	canonical	2	64	junction_4	416.361846835178	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAGAAGCTTTCAGACTACG	-32609929	True	NA	NA	False	NA	NA	NA	32612555	32603224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_32603293_32604124_32604284_32607648_32607717_32609837_32609955_32612104
transcript_92742.known	chr21	+	2453	4	FSM	ENSG00000205930.10	ENST00000382375.8	2453	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAAAATAATAATAATAATGA	NA	False	NA	NA	False	NA	NA	NA	32772099	32798969	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32772309_32784796_32784920_32788611_32788702_32796938
transcript_92745.known	chr21	+	3352	4	FSM	ENSG00000205930.10	ENST00000382378.6	3352	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	0.942809041582063	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGACAGAGTGAGTGAGAC	NA	False	NA	NA	False	NA	NA	NA	32772160	32799917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_32772321_32784796_32784920_32788611_32788702_32796938
transcript_92749.known	chr21	+	1083	2	FSM	ENSG00000184221.13	ENST00000426947.5	1083	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTTACATTTTTTGTCTG	33070930	False	NA	13	True	AATAAA	-16	NA	33070964	33072413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33071686_33072051
transcript_9275.known	chr1	-	621	5	FSM	ENSG00000116874.12	ENST00000495746.5	621	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	36.3627556711534	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAAACTGGCCACCGTCCGA	-119139491	True	NA	NA	False	NA	NA	NA	119140654	119033296	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_119033360_119034094_119034214_119045581_119045663_119076349_119076608_119140554
transcript_92753.known	chr21	+	1941	7	FSM	ENSG00000243646.10	ENST00000290200.7	1941	7	0	0	0	0	multi-exon	FALSE	canonical	2	34	junction_6	6.7515430335097	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTTCATGATACTACCTG	33265866	True	NA	9	True	ATTAAA	-24	NA	33266366	33297221	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33266515_33268393_33268518_33276595_33276754_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_92757.known	chr21	+	786	6	FSM	ENSG00000243646.10	ENST00000422891.5	786	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	16.0573970493352	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGAATGATGTTTTTGACA	33265881	True	NA	NA	False	NA	NA	NA	33266381	33296239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33266515_33268393_33268518_33279751_33279919_33283093_33283242_33288103_33288262_33296183
transcript_92759.known	chr21	-	2228	2	FSM	ENSG00000223799.2	ENST00000411998.2	2232	2	4	0	4	0	multi-exon	FALSE	canonical	0	0	junction_1	0	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	-33266246	True	NA	NA	False	NA	NA	NA	33266260	33263872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33265903_33266062
transcript_92761.known	chr21	+	726	6	FSM	ENSG00000159110.21	ENST00000447980.1	726	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	46.6836159696311	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGTGGCTTCTCCTGTTA	33228746	False	NA	NA	False	NA	NA	NA	33230408	33248854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33230558_33241885_33241978_33243672_33243715_33244950_33245075_33246717_33246891_33248708
transcript_92764.known	chr21	+	6075	11	FSM	ENSG00000142166.13	ENST00000270139.8	6075	11	0	0	0	0	multi-exon	FALSE	canonical	3	130	junction_10	14.5481957644238	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTGTTTCTCACTACCTTTT	33322288	True	NA	NA	False	AAGAAA	-42	NA	33324969	33359864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388_33349544_33352757_33352909_33353637_33353784_33355315
transcript_92769.nic	chr21	+	1544	8	ISM	ENSG00000142166.13	ENST00000270139.8	6075	11	-79	10085	-13	613	5prime_fragment	FALSE	canonical	3	140	junction_6	12.0407471461174	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTGTGGTGGCGTGCA	33324864	False	NA	NA	False	AATAAA	-16	NA	33324890	33349779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33349090_33349291_33349388
transcript_92772.known	chr21	+	1397	7	FSM	ENSG00000142166.13	ENST00000652513.1	1397	7	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_6	57.1297256737292	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGTCTTAAAAGCGCCTTT	33322293	True	NA	NA	False	AATAAA	-23	NA	33324974	33349077	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245_33345361_33348549
transcript_92774.nic	chr21	+	951	6	ISM	ENSG00000142166.13	ENST00000652513.1	1397	7	-84	3719	-13	0	5prime_fragment	FALSE	canonical	3	152	junction_3	9.81019877474458	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAGTAAGTTCCATTCCATAA	33324864	False	NA	NA	False	NA	NA	NA	33324890	33345358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33325132_33335523_33335648_33340998_33341175_33343267_33343423_33343534_33343677_33345245
transcript_92779.nic	chr21	+	494	3	ISM	ENSG00000142166.13	ENST00000652654.1	783	5	-13	4231	-13	-2477	5prime_fragment	FALSE	canonical	3	155	junction_2	10	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACTTCTTCATGGTATGAGG	33324864	False	NA	NA	False	ATTAAA	-27	NA	33324890	33341127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33325132_33335523_33335648_33340998
transcript_9280.known	chr1	+	745	4	FSM	ENSG00000231365.7	ENST00000425884.6	1227	4	0	482	0	-482	multi-exon	FALSE	canonical	1	2	junction_3	4.64279609239471	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTTTTTTTTTTTTTAATAC	119139872	True	NA	NA	False	NA	NA	NA	119140395	119150934	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119140794_119146952_119147070_119150564_119150653_119150792
transcript_92810.known	chr21	-	982	8	FSM	ENSG00000142188.17	ENST00000442441.5	982	8	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_3	69.2216198384668	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGGTTACATCATCTTG	-33478320	True	NA	54	True	NA	NA	NA	33479936	33450546	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33450864_33455726_33455785_33456003_33456098_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_92814.known	chr21	+	1699	7	FSM	ENSG00000159128.15	ENST00000290219.11	1699	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	146.830590212742	354	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTATGTGAAGTGTTTTCT	33400181	True	NA	20	True	AATAAA	-27	NA	33403412	33437516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33403617_33414887_33415021_33421479_33421686_33426883_33427033_33432176_33432337_33432713_33432872_33436827
transcript_92818.known	chr21	-	2332	7	FSM	ENSG00000142188.17	ENST00000542230.7	2332	7	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_2	26.9799308128592	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTAATATTGTTGTTTGTT	-33478358	True	NA	-6	True	AATAAA	-17	NA	33479974	33449140	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33450864_33455726_33455785_33460412_33460506_33465341_33465410_33467009_33467123_33468786_33468927_33479837
transcript_92833.nnic	chr21	-	823	5	NIC	ENSG00000142188.17	novel	3062	9	NA	NA	-46	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_3	70.2103980903114	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAAGCTCATTATTCCTGC	NA	False	NA	-3	True	AATAAA	-45	NA	33480020	33432484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_33432803_33439213_33439298_33448781_33448880_33468786_33468927_33479837
transcript_92840.known	chr21	-	1485	2	FSM	ENSG00000177692.12	ENST00000381947.4	1485	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAGAAAAGAAAATAACTGAA	-33491468	True	NA	NA	False	NA	NA	NA	33491716	33488054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33489425_33491601
transcript_92841.nnic	chr21	-	1323	2	NNC	ENSG00000177692.12	novel	1485	2	NA	NA	-33	-8	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_1	0	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTTTACTATCATAAATCAT	NA	False	NA	-34	True	ATTAAA	-16	NA	33491749	33488226	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_33489425_33491624
transcript_92843.nnic	chr21	-	569	5	NIC	ENSG00000241837.7	novel	816	8	NA	NA	-49	0	combination_of_known_splicesites	FALSE	canonical	3	347	junction_2	2120.55617704413	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCATATTATGTTCACTGTCT	-33868995	True	NA	30	True	AATAAA	-17	NA	33915863	33903455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_33903640_33903934_33904022_33912288_33912400_33914449_33914501_33915727
transcript_92850.known	chr21	-	3318	22	FSM	ENSG00000159131.17	ENST00000381815.9	3318	22	0	0	0	0	multi-exon	FALSE	canonical	3	951	junction_10	319.837402001112	1371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACAGTTTTCTTGGTCTT	-33529099	True	NA	-9	True	AATAGA	-43	NA	33542117	33503932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33504316_33504411_33504528_33505560_33505703_33505973_33506105_33509782_33509921_33511251_33511459_33516988_33517142_33517356_33517609_33520363_33520563_33520905_33521016_33522187_33522283_33524768_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_92864.known	chr21	-	2149	11	FSM	ENSG00000159131.17	ENST00000361093.9	2149	11	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_10	114.359127313914	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGTGTTTTGATTTCTT	-33529096	True	NA	-4	True	AATAAA	-15	NA	33542114	33524008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33525001_33528166_33528336_33528518_33528605_33528849_33528938_33530758_33530885_33531488_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_92869.known	chr21	+	500	6	FSM	ENSG00000159140.21	ENST00000484294.5	500	6	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	386.972143700293	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTTGCCAGCCCTAATAA	33571694	False	NA	NA	False	GATAAA	-20	NA	33571734	33576447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33571789_33572550_33572631_33573307_33573456_33575595_33575668_33575777_33575894_33576417
transcript_9287.nnic	chr1	+	1015	4	NNC	ENSG00000232650.6	novel	1219	3	NA	NA	-10	0	at_least_one_novel_splicesite	FALSE	canonical	3	19	junction_1	1.4142135623731	72	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	NA	False	NA	17	True	ATTAAA	-26	NA	119327388	119330815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_119327917_119328130_119328288_119328743_119328790_119330531
transcript_92872.known	chr21	-	806	6	FSM	ENSG00000159131.17	ENST00000476524.1	806	6	0	0	0	0	multi-exon	FALSE	canonical	3	1467	junction_5	101.448311962299	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGCAAATGAAAAAATAATCG	-33529061	True	NA	NA	False	CATAAA	-44	NA	33542079	33531335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33531558_33532344_33532457_33534578_33534754_33535224_33535321_33539170_33539357_33542064
transcript_92886.known	chr21	+	3913	29	FSM	ENSG00000205726.15	ENST00000399353.5	3913	29	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	71.6206969715729	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGAAAGTCCTCAAAGAGACC	NA	False	NA	NA	False	NA	NA	NA	33642399	33837018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750253_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_92887.known	chr21	+	5408	29	FSM	ENSG00000205726.15	ENST00000399352.5	5408	29	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_23	41.3766300005702	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGAAATGTCTCTGTGTT	33630905	True	NA	29	True	ATTAAA	-19	NA	33642495	33838498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33823486_33823654_33826817_33826864_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_92889.nic	chr21	+	1317	11	ISM	ENSG00000205726.15	ENST00000399355.6	4003	28	-46	69484	0	-4473	5prime_fragment	FALSE	canonical	3	315	junction_5	18.3401199559872	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAGAAAAGAAATTACCTGG	33630861	True	NA	6	True	NA	NA	NA	33642451	33767809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712
transcript_92890.known	chr21	+	5191	27	FSM	ENSG00000205726.15	ENST00000399349.5	5191	27	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_23	62.6762249309707	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGATGGAAATGTCTCTGTG	33630907	True	NA	27	True	ATTAAA	-17	NA	33642497	33838496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33750142_33750323_33751809_33751907_33755296_33755398_33761922_33761987_33765874_33766013_33767712_33767829_33772060_33772324_33774728_33774879_33774967_33775109_33781460_33781549_33781993_33782134_33794340_33794469_33797378_33797609_33799807_33799930_33810974_33811223_33813912_33814073_33818266_33818473_33819240_33819324_33829623_33829746_33834306_33834425_33836440_33836633_33836986
transcript_92891.nic	chr21	+	955	6	NIC	ENSG00000205726.15	novel	827	7	NA	NA	5	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_5	135.982940106471	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTGAGTCACTTGGCCAC	33630867	True	NA	NA	False	AATATA	-17	NA	33642457	33735626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_33642714_33718796_33718857_33721177_33721271_33722587_33722652_33735043_33735205_33735305
transcript_92895.known	chr21	-	2224	13	FSM	ENSG00000205758.12	ENST00000361534.6	2224	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	133.250078173836	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTTTCTAAAAGGATTTTTAA	-33638862	True	NA	-6	True	ATTAAA	-33	NA	33641759	33594506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33595615_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641178_33641306_33641680
transcript_92901.known	chr21	-	1598	13	FSM	ENSG00000205758.12	ENST00000381554.8	1598	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	97.9731751835958	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGTGTTTTCAACTATTC	-33638844	True	NA	0	True	NA	NA	NA	33641741	33589340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33589922_33591161_33591208_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_92902.known	chr21	-	1482	13	FSM	ENSG00000205758.12	ENST00000381540.7	1482	13	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	97.9731751835958	455	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCAAAGTAACGTATTAATT	-33638850	True	NA	-27	True	GATAAA	-26	NA	33641747	33589466	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33589922_33591161_33591212_33595730_33595837_33597279_33597402_33599149_33599249_33602233_33602346_33603403_33603538_33613537_33613607_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_92903.known	chr21	-	627	6	FSM	ENSG00000205758.12	ENST00000413017.2	627	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	114.465016489756	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTTTCCTGGTTTTTGGAA	-33638825	True	NA	NA	False	AATAAA	-13	NA	33641722	33616286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33616604_33616705_33616751_33621995_33622069_33624682_33624761_33631485_33631558_33641680
transcript_92904.known	chr21	-	612	3	FSM	ENSG00000205758.12	ENST00000399442.1	612	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTCTTGATTTTTGAAT	-33638824	True	NA	NA	False	AATAAA	-13	NA	33641721	33639744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33640189_33641178_33641306_33641680
transcript_9292.nnic	chr1	+	1102	4	NNC	ENSG00000232650.6	novel	1219	3	NA	NA	-7	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	9.7410927974683	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	119327066	True	NA	17	True	ATTAAA	-26	NA	119327391	119330815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_119328007_119328130_119328288_119328743_119328790_119330531
transcript_92935.known	chr21	+	9124	3	FSM	ENSG00000237945.8	ENST00000427447.5	9124	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	4	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTATAATGTCAGCCTGGTG	33930654	True	NA	NA	False	AATAAA	-17	NA	33931159	33977691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931743_33945809_33945896_33969236
transcript_92938.known	chr21	+	2090	3	FSM	ENSG00000237945.8	ENST00000400353.6	2090	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATCTCAAGTGATCTACCCTC	33930708	True	NA	NA	False	NA	NA	NA	33931213	33971186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931268_33945809_33945896_33969236
transcript_92944.known	chr21	+	207	2	FSM	ENSG00000237945.8	ENST00000622171.1	207	2	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTGCCGTGATCCTGGGGG	33930717	True	NA	-66	True	NA	NA	NA	33931222	33938301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931353_33938224
transcript_92946.known	chr21	+	728	2	FSM	ENSG00000237945.8	ENST00000599421.1	728	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGGCTGAAGTTTTTCTTT	33930657	True	NA	5	True	ATTAAA	-16	NA	33931162	33938372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_33931743_33938224
transcript_92949.known	chr21	-	591	2	FSM	ENSG00000273102.2	ENST00000607953.2	592	2	0	1	0	-1	multi-exon	FALSE	canonical	3	35	junction_1	0	370	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTGCTATTTGGTAATACG	NA	False	NA	-14	True	AATAAA	-18	NA	33968573	33967100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33967351_33968232
transcript_92950.known	chr21	-	756	7	FSM	ENSG00000241837.7	ENST00000290299.7	756	7	0	0	0	0	multi-exon	FALSE	canonical	3	4445	junction_6	387.616505783172	42794	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868936	True	NA	-32	True	AATAAA	-20	NA	33915804	33903452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_92951.known	chr21	-	583	6	FSM	ENSG00000241837.7	ENST00000431254.5	583	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_3	2087.32991163352	838	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868893	True	NA	-32	True	AATAAA	-20	NA	33915761	33903452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33907340_33907454_33912288_33912400_33914449_33914501_33915727
transcript_92952.known	chr21	-	816	8	FSM	ENSG00000241837.7	ENST00000652380.1	816	8	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_3	2325.2310923117	530	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATATTATGTTCACTGTCTT	-33868946	True	NA	31	True	AATAAA	-18	NA	33915814	33903454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33906448_33906501_33907340_33907454_33909081_33909212_33912288_33912400_33914449_33914501_33915727
transcript_92953.known	chr21	-	2839	6	FSM	ENSG00000241837.7	ENST00000491703.5	2839	6	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2115.30665389205	222	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTATGTTCACTGTCTTTT	-33868900	True	NA	-32	True	AATAAA	-20	NA	33915768	33903452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33903640_33903934_33904022_33906448_33907454_33909081_33909212_33912288_33912400_33914449
transcript_92954.known	chr21	-	673	3	FSM	ENSG00000241837.7	ENST00000496044.5	673	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	2567	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCCACAGCTCTTTATTC	-33868856	False	NA	NA	False	TTTAAA	-35	NA	33915724	33912366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_33912400_33914449_33914501_33915135
transcript_92958.known	chr21	+	909	5	FSM	ENSG00000243927.6	ENST00000488492.5	909	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	375.280811526515	337	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	34073197	False	NA	19	True	AATAAA	-19	NA	34073223	34143034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073269_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_92959.known	chr21	+	1061	5	FSM	ENSG00000243927.6	ENST00000477091.5	1061	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	373.093151907134	371	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGAGGTGTTTTGTCCCTTTA	34051334	True	NA	19	True	AATAAA	-19	NA	34073548	34143034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073746_34102834_34102909_34103496_34103520_34125340_34125481_34142407
transcript_92966.known	chr21	+	931	3	FSM	ENSG00000243927.6	ENST00000399312.3	931	3	0	0	0	0	multi-exon	FALSE	canonical	3	860	junction_1	22	4012	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGGGAGGTGTTTTGTCCC	34051363	True	NA	15	True	AATAAA	-15	NA	34073577	34143030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073746_34125340_34125481_34142407
transcript_92969.known	chr21	+	11566	2	FSM	ENSG00000198743.7	ENST00000381151.5	11566	2	0	0	0	0	multi-exon	TRUE	canonical	3	22	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTCTGTGACTAAGTATT	34051363	True	NA	12	True	AATAAA	-13	NA	34073577	34106260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34073746_34094862
transcript_92970.known	chr21	+	655	2	FSM	ENSG00000227456.9	ENST00000428914.2	655	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTATTCCAAGGCAATTGTT	NA	False	NA	NA	False	TATAAA	-18	NA	34180676	34183245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34180794_34182707
transcript_92973.nnic	chr21	+	598	4	NIC	ENSG00000272657.1	novel	641	6	NA	NA	-75	-35107	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	1.24721912892465	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCCTTTGTTGATGAAGCA	34051302	True	NA	30	True	AATAAA	-39	NA	34073516	34324926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_34073746_34262819_34262922_34293680_34293757_34324735
transcript_92977.nic	chr21	-	1195	2	ISM	ENSG00000225555.2	ENST00000440403.2	2643	3	-421	17416	-421	-17416	5prime_fragment	FALSE	canonical	2	6	junction_1	0	52	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCAGCGTCTGTGTGAAAT	NA	False	NA	-1	True	AATAAA	-19	NA	34375785	34370514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_34371161_34375236
transcript_92979.known	chr21	+	1220	5	FSM	ENSG00000205670.12	ENST00000481710.5	1220	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	88.3130086680326	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375479	34402777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34399710_34399900_34402090
transcript_92982.known	chr21	+	840	4	FSM	ENSG00000205670.12	ENST00000399292.8	840	4	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_3	3.29983164553722	1335	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGAGTCGTGGCCTTTGGAAT	NA	False	NA	NA	False	AATAAA	-18	NA	34375506	34389151	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375568_34379427_34379517_34385477_34385645_34388628
transcript_92985.known	chr21	+	1033	4	FSM	ENSG00000205670.12	ENST00000399299.5	1033	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	81.3428956127495	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTTTTACAGTTTTCAT	NA	False	NA	NA	False	AATAAA	-29	NA	34375499	34402777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375568_34379427_34379517_34399710_34399900_34402090
transcript_92989.known	chr21	+	1074	4	FSM	ENSG00000205670.12	ENST00000399295.2	1074	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	84.4445906431483	299	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTCGTGGCCTTTGGAATAA	NA	False	NA	NA	False	AATAAA	-20	NA	34375603	34389153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34375897_34379427_34379517_34385477_34385645_34388628
transcript_92990.known	chr21	-	2408	4	FSM	ENSG00000159200.18	ENST00000381132.6	2408	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_3	19.5675468285856	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTGTCATTTTATTTCTAGA	-34526899	True	NA	-1	True	AATAAA	-28	NA	34526963	34516483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34526662
transcript_92991.known	chr21	-	2503	4	FSM	ENSG00000159200.18	ENST00000313806.9	2503	4	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	1.24721912892465	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTGCAGTTTAAAAGGCTT	-34614933	False	180	41	True	AATAAA	-18	NA	34615113	34516441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_34518257_34521498_34521659_34523536_34523711_34614759
transcript_92993.known	chr21	+	2632	3	FSM	ENSG00000234380.2	ENST00000420877.1	2632	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	1	108	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TTAAGATGGAGATAGCAGAA	34745689	True	NA	NA	False	NA	NA	NA	34745756	34784886	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_34746017_34782124_34782191_34782580
transcript_92994.known	chr21	+	1048	2	FSM	ENSG00000231106.3	ENST00000457157.3	1249	2	201	0	201	0	multi-exon	TRUE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGCCAGTTCGAATTAAT	NA	False	NA	NA	False	AATAAA	-17	NA	36005337	36007838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36005866_36007318
transcript_9301.nnic	chr1	-	1551	3	NNC	ENSG00000227712.2	novel	861	3	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	0.5	21	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTCCCCGAGTGGCTGA	NA	False	NA	0	True	AATAAA	-21	NA	119327333	119317352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_119317928_119318270_119318876_119326962
transcript_93019.known	chr21	-	1160	7	FSM	ENSG00000185917.14	ENST00000399207.5	1160	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	135.834458073053	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATCAAAACCTTAAGACTGA	-36060231	False	NA	-21	True	AATAAA	-3	NA	36060245	36043697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060106
transcript_93024.known	chr21	-	1165	7	FSM	ENSG00000185917.14	ENST00000399208.6	1165	7	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_6	133.701159306866	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGACTGACATACATATCAC	-36060350	False	NA	-9	True	AATAAA	-15	NA	36060364	36043685	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058974_36060281
transcript_9303.nic	chr1	-	943	2	ISM	ENSG00000227712.2	ENST00000653227.1	861	3	585	0	-27	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGTCTCCCCGAGTGGCTGA	NA	False	NA	0	True	AATAAA	-21	NA	119327330	119317352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_119317928_119326962
transcript_9304.nnic	chr1	-	1291	2	NNC	ENSG00000227712.2	novel	722	2	NA	NA	-30	-603	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATTGCATTTGTGGTTTCT	NA	False	NA	NA	False	AATAAA	-20	NA	119327333	119317955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_119318876_119326962
transcript_93044.known	chr21	+	2336	2	FSM	ENSG00000233393.2	ENST00000422473.1	2336	2	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	0	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCAGTGTCTGAGGAGTT	36102794	True	NA	2	True	AGTAAA	-15	NA	36104880	36109690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36105124_36107597
transcript_93045.nnic	chr21	+	977	2	NNC	ENSG00000233393.2	novel	502	2	NA	NA	-257	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTATCTATCTTTTCCTTT	36104140	True	NA	22	True	ATTAAA	-16	NA	36104623	36107851	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_36105331_36107581
transcript_93047.known	chr21	-	2991	12	FSM	ENSG00000185917.14	ENST00000332131.9	2991	12	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_5	95.8969832943596	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTCATTGTGCTTTCCT	-36057237	True	NA	-14	True	ATTAAA	-17	NA	36060526	36034540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36035961_36036084_36036252_36038149_36038274_36040574_36040656_36041806_36041889_36043781_36043957_36045581_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060346
transcript_93048.known	chr21	+	1208	3	FSM	ENSG00000159228.13	ENST00000290349.11	1208	3	0	0	0	0	multi-exon	FALSE	canonical	3	2371	junction_1	18	5046	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATTTGTACAGATTGTTT	36047298	True	NA	31	True	AATAAA	-17	NA	36070023	36073164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36070405_36070949_36071058_36072445
transcript_93049.known	chr21	-	745	6	FSM	ENSG00000185917.14	ENST00000429161.5	745	6	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_5	125.071819367914	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCACTCGCTCCGTACCTGG	-36060299	False	3289	NA	False	NA	NA	NA	36060313	36045630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36046012_36048307_36048397_36053582_36053621_36057108_36057205_36058815_36058925_36060281
transcript_9305.known	chr1	+	1219	3	FSM	ENSG00000232650.6	ENST00000420059.6	1219	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	1.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAAGGTCAGTCCGTGGTTTG	119327073	True	NA	17	True	ATTAAA	-26	NA	119327398	119330815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119328288_119328743_119328790_119330531
transcript_93050.known	chr21	+	7685	37	FSM	ENSG00000142197.13	ENST00000399151.3	7685	37	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.40547276401141	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACAAATGTCCTTTAAAGTG	36163997	False	NA	12	True	ATTAAA	-24	NA	36164534	36294274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36164594_36164707_36164872_36199069_36199252_36200330_36200502_36208714_36208905_36211552_36211652_36211973_36212098_36214080_36214191_36214441_36214557_36219371_36219493_36223230_36223351_36225564_36225668_36227685_36227878_36230449_36231135_36232803_36233076_36237261_36237415_36238600_36238702_36239764_36239956_36245047_36246678_36247516_36247629_36248379_36248569_36251161_36251285_36253771_36253910_36260676_36260733_36263545_36263651_36263747_36263815_36270012_36270158_36277020_36277101_36277974_36278085_36278208_36278356_36280284_36280347_36281482_36281612_36288013_36288151_36288755_36288812_36289044_36289207_36292103_36292234_36293319
transcript_93051.known	chr21	+	998	3	FSM	ENSG00000159231.6	ENST00000290354.6	998	3	0	0	0	0	multi-exon	FALSE	canonical	3	98	junction_1	2	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAATTGATGCTGTGGTTTG	36133845	True	NA	NA	False	AATAAA	-20	NA	36135078	36146562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36135482_36137824_36137933_36146075
transcript_93055.known	chr21	+	4224	17	FSM	ENSG00000159256.13	ENST00000400485.6	4224	17	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	21.4810963407364	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTCAAATGCTACTTTTA	36318407	True	NA	11	True	AATAAA	-22	NA	36320196	36376632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36320304_36333645_36333719_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_93056.known	chr21	+	4131	16	FSM	ENSG00000159256.13	ENST00000487909.5	4131	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	28.5485940498341	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTTTTAAAGACTTAATATTA	36318441	True	NA	25	True	AATAAA	-36	NA	36320230	36376646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36320304_36336873_36337007_36337731_36337947_36338773_36338922_36341398_36341547_36344578_36344708_36344911_36345032_36349310_36349409_36356619_36356725_36359954_36360078_36360183_36360259_36362182_36362229_36364092_36364260_36368987_36369877_36372373_36372532_36375142
transcript_93062.known	chr21	+	4466	14	FSM	ENSG00000159259.8	ENST00000314103.6	4466	14	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_11	24.0876112919376	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAGTGTCATAGTCTAAA	36381484	True	NA	15	True	AATAAA	-17	NA	36385391	36419015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36399520_36399606_36402757_36402852_36408760_36408831_36409373_36409466_36411462_36411605_36412883_36413316_36415294_36415390_36416274
transcript_93067.nic	chr21	+	1724	7	NIC	ENSG00000159259.8	novel	1152	6	NA	NA	-28	484	combination_of_known_junctions	FALSE	canonical	3	19	junction_6	76.3007572410363	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGTCTTGTTGTCGTGTTT	36381456	True	NA	7	True	AATAAA	-23	NA	36385363	36398723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_36385452_36386059_36386263_36387597_36387731_36391550_36391669_36394546_36394651_36397414_36397512_36397742
transcript_93070.known	chr21	-	539	2	FSM	ENSG00000286517.1	ENST00000478313.1	539	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCATGCCCATTTCACTTAT	NA	False	NA	NA	False	AATAAA	-17	NA	36542855	36526279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_36526528_36542564
transcript_93072.known	chr21	+	2005	4	FSM	ENSG00000183145.9	ENST00000485272.5	2005	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	4.98887651569859	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAATGTTTGATAATCACCCT	37006130	False	NA	5	True	AATAAA	-11	NA	37006149	37019659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_37006234_37008156_37008224_37013550_37013619_37017873
transcript_93076.known	chr21	-	972	6	FSM	ENSG00000185808.14	ENST00000399098.5	972	6	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_4	59.4252471597721	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071489	True	NA	-4	True	AATAAA	-21	NA	37073170	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37072999
transcript_93078.nnic	chr21	-	905	6	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_5	67.4726611302682	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071519	False	NA	-4	True	AATAAA	-21	NA	37073200	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072144_37072311_37072433_37072538_37073096
transcript_93089.known	chr21	-	688	5	FSM	ENSG00000185808.14	ENST00000399102.5	688	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_4	65.8193550560927	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071219	False	NA	-4	True	AATAAA	-21	NA	37072900	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072847
transcript_93090.known	chr21	-	656	5	FSM	ENSG00000185808.14	ENST00000399103.5	656	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	68.2362623536782	979	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071330	True	NA	-4	True	AATAAA	-21	NA	37073011	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37072990
transcript_93091.nnic	chr21	-	766	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-21	0	at_least_one_novel_splicesite	FALSE	canonical	2	13	junction_4	63.4167761716094	103	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071510	True	NA	-4	True	AATAAA	-21	NA	37073191	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073060
transcript_93092.nnic	chr21	-	739	5	NNC	ENSG00000185808.14	novel	972	6	NA	NA	-30	0	at_least_one_novel_splicesite	FALSE	canonical	3	17	junction_4	61.8238424881534	199	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37071519	False	NA	-4	True	AATAAA	-21	NA	37073200	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_37065713_37067261_37067381_37069551_37069625_37072433_37072538_37073096
transcript_93119.known	chr21	-	562	3	FSM	ENSG00000185808.14	ENST00000329667.7	562	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	75.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TAGCAGACTTAAAAAAAAAA	-37070856	False	NA	-4	True	AATAAA	-21	NA	37072537	37065373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37065713_37067261_37067381_37072433
transcript_93121.known	chr21	-	3056	8	FSM	ENSG00000157538.14	ENST00000309117.11	3056	8	0	0	0	0	multi-exon	FALSE	canonical	3	253	junction_4	29.849281261644	220	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGACTGCTTTCCTTAGAG	-37262913	True	NA	NA	False	AATAAA	-20	NA	37267334	37223421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_93126.known	chr21	-	988	7	FSM	ENSG00000157538.14	ENST00000398998.1	988	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	111.449041668777	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGAGGAGGGAAGCATAG	-37267372	False	NA	NA	False	NA	NA	NA	37267532	37225543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37233361_37233443_37238459_37238610_37267237
transcript_93127.known	chr21	-	937	7	FSM	ENSG00000157538.14	ENST00000476950.5	937	7	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_4	94.0703046780557	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTACAGCCAGCGGCATAT	-37262925	True	NA	-73	True	NA	NA	NA	37267346	37225471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37238459_37238610_37240495_37240640_37267237
transcript_93132.nic	chr21	-	1304	7	NIC	ENSG00000157538.14	novel	555	4	NA	NA	-160	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_1	139.799161498042	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCACTGGTGGTTTTTTGT	-37267532	False	NA	NA	False	AATAAA	-23	NA	37267692	37230517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_37230819_37231492_37231591_37232376_37232452_37233361_37233443_37238459_37238610_37240495_37240640_37267237
transcript_93137.known	chr21	-	821	5	FSM	ENSG00000157538.14	ENST00000399001.5	821	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	115.67194992737	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATTTCACAGAAAACATTG	-37262930	True	NA	-20	True	NA	NA	NA	37267351	37225298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37225627_37227653_37227807_37228222_37228374_37232376_37232452_37267237
transcript_93143.known	chr21	+	520	2	FSM	ENSG00000242553.1	ENST00000440629.1	520	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGATAATGTATCTACTAAGG	NA	False	NA	NA	False	TTTAAA	-20	NA	37221418	37237744	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_37221598_37237403
transcript_93144.nic	chr21	-	1491	2	ISM	ENSG00000157538.14	ENST00000475009.1	715	3	-289	1399	-160	-1248	5prime_fragment	FALSE	canonical	3	282	junction_1	0	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATCACAGCTCTTCTGAGAA	-37267532	False	NA	NA	False	NA	NA	NA	37267692	37239603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_37240640_37267237
transcript_93145.known	chr21	-	959	2	FSM	ENSG00000157538.14	ENST00000498789.1	959	2	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	0	697	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTTGTATTCCTGGGCCTG	-37262919	True	NA	-7	True	ATTAAA	-18	NA	37267340	37261081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_37261938_37267237
transcript_93147.nnic	chr21	+	632	3	Intergenic	novelGene_36	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGGGGAGGCTGCCTATG	37590449	True	NA	NA	False	AATAAA	-21	NA	37590462	37595761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr21_+_37590648_37594706_37594932_37595539
transcript_93149.known	chr21	+	437	3	FSM	ENSG00000198054.12	ENST00000469658.5	437	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCACAAACATCTTTCCTG	NA	False	NA	NA	False	AATAAA	-19	NA	38121472	38156511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_38121602_38122311_38122412_38156303
transcript_93157.known	chr21	-	760	6	FSM	ENSG00000183527.12	ENST00000431628.1	760	6	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	346.513260929506	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTAAACATTGTTTTGTAG	-39183373	False	NA	NA	False	AAGAAA	-43	NA	39183385	39175589	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39183251
transcript_93166.known	chr21	-	1754	7	FSM	ENSG00000183527.12	ENST00000331573.8	1754	7	0	0	0	0	multi-exon	FALSE	canonical	3	744	junction_3	80.745828925641	2122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACCACAAACTGAACTGCA	-39173930	True	NA	NA	False	NA	NA	NA	39183451	39174768	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39175665_39177434_39177572_39178448_39178648_39179923_39179987_39180284_39180437_39181771_39181879_39183251
transcript_93167.known	chr21	-	2495	5	FSM	ENSG00000185658.14	ENST00000341322.4	2495	5	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_4	5.80409338312195	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTAAGTATTCTATAAAATC	-39305397	True	NA	39	True	AATAAA	-18	NA	39313642	39296436	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39298583_39312840_39312901_39313071_39313102_39313240_39313300_39313442
transcript_93169.known	chr21	+	1028	1	FSM	ENSG00000255568.3	ENST00000603064.2	1028	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	13	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACCGTGTACAAGTTGGCT	39313842	False	NA	NA	False	AATGAA	-24	NA	39313934	39314962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39313900_39315000
transcript_9317.known	chr1	+	1866	12	FSM	ENSG00000092621.13	ENST00000641023.2	1866	12	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	102.554480582778	11698	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675519	True	NA	24	True	AATAAA	-15	NA	119711933	119744215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_93172.known	chr21	-	709	6	FSM	ENSG00000205581.11	ENST00000380747.5	709	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2130.21242133267	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGAATTATGGGAGGCTCTG	NA	False	NA	-128	True	NA	NA	NA	39349647	39342878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39349459
transcript_93175.known	chr21	-	1271	6	FSM	ENSG00000205581.11	ENST00000380749.10	1271	6	0	0	0	0	multi-exon	FALSE	canonical	3	4768	junction_5	422.739446941021	6070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGAAGCACATGGATTAA	-39255513	True	NA	-2	True	AATAAA	-19	NA	39349088	39342314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_93176.known	chr21	-	1045	7	FSM	ENSG00000205581.11	ENST00000436324.5	1045	7	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_3	2273.53767410077	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTCTGTAACATCTTTGTGG	-39255513	True	NA	-92	True	AAGAAA	-42	NA	39349088	39342645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39343160_39345145_39345275_39347378_39347484_39348291_39348340_39348421_39348452_39348544_39348578_39348902
transcript_93177.known	chr21	+	1328	9	FSM	ENSG00000285815.1	ENST00000647779.1	1328	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	132.76759534992	62	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	39376234	True	NA	NA	False	AATAAA	-17	NA	39380331	39515506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_9318.known	chr1	+	1180	5	FSM	ENSG00000092621.13	ENST00000641573.1	1180	5	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	84.8071341338687	812	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGCCGGGCGTGGTGGCGG	119675520	True	NA	NA	False	ACTAAA	-17	NA	119711934	119727684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003
transcript_93181.nnic	chr21	+	1263	4	NIC	ENSG00000182093.16	novel	1534	5	NA	NA	-33	-43	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	161.365699232795	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGTGTGGCCTACAAA	39380265	False	NA	13	True	AAAACA	-32	NA	39380292	39397700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_39380487_39390697_39390864_39391768_39391837_39396865
transcript_93184.nnic	chr21	+	1162	4	NIC	ENSG00000182093.16	novel	1464	5	NA	NA	-2	-43	combination_of_known_splicesites	FALSE	canonical	1	6	junction_3	158.274725995305	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TAACCTGTGTGGCCTACAAA	39386607	True	NA	13	True	AAAACA	-32	NA	39387762	39397700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_39387856_39390697_39390864_39391768_39391837_39396865
transcript_93185.known	chr21	+	1534	5	FSM	ENSG00000182093.16	ENST00000649170.1	1534	5	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	55.5939520091889	2048	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39376228	True	NA	5	True	AGTAAA	-18	NA	39380325	39397889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_93189.known	chr21	+	1437	5	FSM	ENSG00000182093.16	ENST00000649822.1	1437	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	166.31502487749	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCTGCAAGTTCATATT	39380401	False	NA	4	True	AGTAAA	-17	NA	39380477	39397888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697_39390920_39391768_39391837_39393165_39393281_39396865
transcript_9319.known	chr1	+	1638	10	FSM	ENSG00000092621.13	ENST00000641115.1	1638	10	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_8	739.310188997525	333	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119675483	True	NA	24	True	AATAAA	-15	NA	119711897	119744215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119742806_119743045_119743885
transcript_93193.known	chr21	+	699	5	FSM	ENSG00000182093.16	ENST00000398753.5	699	5	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	171.03855559493	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACCTGTCATTGAGCCAAG	39380230	False	NA	NA	False	NA	NA	NA	39380457	39397116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380557_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_9320.known	chr1	+	508	3	FSM	ENSG00000092621.13	ENST00000496756.2	508	3	0	0	0	0	multi-exon	FALSE	canonical	3	2413	junction_2	2.5	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGCAAAGCTAGTCTCTCC	119675472	True	NA	NA	False	NA	NA	NA	119711886	119723457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375
transcript_93203.known	chr21	+	1464	5	FSM	ENSG00000182093.16	ENST00000380708.5	1464	5	0	0	0	0	multi-exon	FALSE	canonical	3	159	junction_1	105.831233574971	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTCTGCAAGTTCATATTT	39386609	True	NA	5	True	AGTAAA	-18	NA	39387764	39397889	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39387856_39390697_39390864_39391768_39391837_39393165_39393281_39396865
transcript_93209.known	chr21	+	1416	5	FSM	ENSG00000182093.16	ENST00000466787.1	1416	5	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_2	167.840698282627	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCATATTGCCAACTGGAAA	39386635	True	NA	NA	False	NA	NA	NA	39387790	39397254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39387856_39390697_39391477_39391768_39391837_39393165_39393281_39396865
transcript_9321.known	chr1	+	1780	11	FSM	ENSG00000092621.13	ENST00000641074.1	1780	11	0	0	0	0	multi-exon	TRUE	canonical	1	5	junction_9	713.499376313673	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAACTCCTTCTGCACTTTTG	119675471	True	NA	21	True	AATAAA	-12	NA	119711885	119744212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119742806_119743045_119743885
transcript_93219.known	chr21	-	1308	4	FSM	ENSG00000157578.14	ENST00000491625.5	1308	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGACTGGATTGATTTTCCTC	NA	False	NA	NA	False	ATTAAA	-14	NA	39445805	39422411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39423491_39429130_39429212_39444134_39444202_39445724
transcript_9322.known	chr1	+	2053	13	FSM	ENSG00000092621.13	ENST00000641213.1	2053	13	0	0	0	0	multi-exon	TRUE	canonical	1	18	junction_3	885.02408943988	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675469	True	NA	10	True	AATAAA	-1	NA	119711883	119744201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119724318_119724470_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119741898_119742806_119743045_119743885
transcript_93221.known	chr21	+	581	2	FSM	ENSG00000182093.16	ENST00000471468.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	276	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTTGTTCCACTCTCTA	39380186	True	NA	NA	False	AAAAAG	-21	NA	39380413	39391205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39380487_39390697
transcript_93222.known	chr21	+	1014	7	FSM	ENSG00000185437.15	ENST00000380637.7	1014	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	15.4784796841723	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	39445593	True	NA	NA	False	AATAAA	-17	NA	39445854	39515506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39445930_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_93223.known	chr21	+	816	7	FSM	ENSG00000185437.15	ENST00000380634.5	816	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	15.8394724940223	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TGAAAAAAATGATTTCAAGG	39445603	True	NA	NA	False	NA	NA	NA	39445864	39515355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39445893_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_93224.known	chr21	+	780	7	FSM	ENSG00000185437.15	ENST00000380631.5	780	7	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	12.9700509722291	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGATGTACATGGAGGTATCT	39445680	False	NA	NA	False	NA	NA	NA	39445941	39515207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39446082_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_93225.known	chr21	+	1109	7	FSM	ENSG00000185437.15	ENST00000333634.10	1109	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	8.47381587925744	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTTGTCCCAAGGAGCAT	39451766	True	NA	NA	False	AATAAA	-15	NA	39451969	39515504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39499822_39499916_39508997_39509028_39511679_39511810_39515087
transcript_9323.known	chr1	+	1031	8	FSM	ENSG00000092621.13	ENST00000641811.1	1031	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	806.286271134768	357	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTTCTGCACTTTTGTGT	119720989	True	NA	24	True	AATAAA	-15	NA	119721275	119744215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119743885
transcript_93233.known	chr21	+	865	6	FSM	ENSG00000185437.15	ENST00000452550.5	865	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.5840837122666	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGTCCCAAGGAGCATCA	39451919	False	NA	NA	False	AATAAA	-17	NA	39452122	39515506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39452142_39462374_39462561_39475134_39475216_39508997_39509028_39511679_39511810_39515087
transcript_93239.known	chr21	-	2340	5	FSM	ENSG00000184809.13	ENST00000670883.1	2340	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	93.0601284116888	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-39612608	False	NA	NA	False	ATTAAA	-18	NA	39612646	39597146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39597990_39599340_39600280_39601418_39601544_39609582_39609666_39612296
transcript_9324.known	chr1	+	2794	11	FSM	ENSG00000092621.13	ENST00000642021.1	2794	11	0	0	0	0	multi-exon	FALSE	canonical	3	2221	junction_3	104.220727305081	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTACCCCCAACTCCTT	119675486	True	NA	10	True	AATAAA	-1	NA	119711900	119744201	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_119712161_119721169_119721322_119723375_119723442_119726850_119726906_119727003_119727103_119734633_119734767_119735294_119735444_119737113_119737267_119740385_119740519_119741766_119743045_119743885
transcript_93240.known	chr21	-	1919	4	FSM	ENSG00000184809.13	ENST00000489821.5	1919	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	105.492495783665	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCAGAACTATGAGTCAA	-39612354	False	NA	NA	False	NA	NA	NA	39612392	39597188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39597990_39599340_39600280_39609582_39609666_39612296
transcript_93241.known	chr21	-	3846	4	FSM	ENSG00000184809.13	ENST00000670049.1	3846	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	96.8744892459654	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGTTTCTTGAGGCCTCTCCA	-39611081	True	NA	NA	False	NA	NA	NA	39612857	39597202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39600280_39601418_39601544_39609582_39609666_39612296
transcript_93244.known	chr21	-	1071	3	FSM	ENSG00000184809.13	ENST00000380612.8	1071	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	104	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACCTAGTCTTGTGTATTT	-39612403	False	NA	NA	False	ATTAAA	-18	NA	39612441	39597146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39597990_39609582_39609666_39612296
transcript_93247.nnic	chr21	-	964	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	6	34	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	114.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTGATACATGCGTTATT	-39611075	True	NA	-8	True	AATAAA	-24	NA	39612851	39602808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_39603135_39609582_39609666_39612296
transcript_93248.known	chr21	-	1823	3	FSM	ENSG00000184809.13	ENST00000380604.8	1823	3	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_1	91.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAATTAGCCGGGCGCGGT	-39612466	False	NA	NA	False	AATACA	-1	NA	39612504	39604470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39606003_39609582_39609666_39612296
transcript_93249.known	chr21	-	4202	3	FSM	ENSG00000184809.13	ENST00000661806.1	4202	3	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	68	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGTAAAATAAATGCAAGGGA	-39612872	False	NA	-42	True	NA	NA	NA	39612910	39602842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39606348_39609582_39609666_39612296
transcript_93250.nnic	chr21	-	1723	3	NNC	ENSG00000184809.13	novel	4202	3	NA	NA	6	33	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	110.5	84	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTAAATGTTTGACATTTC	-39611075	True	NA	-7	True	ATTAAA	-19	NA	39612851	39604100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_-_39605186_39609582_39609666_39612296
transcript_93253.known	chr21	-	3106	3	FSM	ENSG00000184809.13	ENST00000329618.7	3106	3	0	0	0	0	multi-exon	FALSE	canonical	3	17	junction_1	106.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTATTATTATTAAAGTTCT	-39611100	True	NA	-40	True	NA	NA	NA	39612876	39604133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_39606577_39609582_39609666_39612296
transcript_93256.known	chr21	+	534	3	FSM	ENSG00000183036.11	ENST00000328619.10	534	3	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_2	0.5	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCAAGTGACTGCCTTTCTT	39867313	True	NA	8	True	AATAAA	-21	NA	39867437	39929392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39867511_39898475_39898528_39928983
transcript_93257.known	chr21	+	587	3	FSM	ENSG00000183036.11	ENST00000467565.1	587	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGACTGCCTTTCTTTCTCT	NA	False	NA	13	True	AATAAA	-26	NA	39898475	39929397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_39898528_39916065_39916187_39928983
transcript_93259.known	chr21	+	1317	8	FSM	ENSG00000183844.17	ENST00000357985.7	1317	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	4.22335585688414	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCCACGTCTGGCACCGG	41316509	True	NA	NA	False	NA	NA	NA	41316800	41357727	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41316899_41322922_41323067_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_93264.known	chr21	+	864	7	FSM	ENSG00000183844.17	ENST00000398647.7	864	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.31245915016974	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAATGATGTGATTCAAGC	41316522	True	NA	95	True	ACTAAA	-20	NA	41316813	41357431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41316899_41338377_41338502_41344475_41344535_41345685_41345737_41347012_41347101_41348591_41348725_41357107
transcript_93266.known	chr21	+	2776	17	FSM	ENSG00000157601.15	ENST00000398598.8	2776	17	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_1	4.27017271313468	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTGCTCTGCCATGTTTTG	41425992	True	NA	16	True	AATAAA	-16	NA	41426238	41459212	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_41426264_41427205_41427305_41427754_41427867_41430532_41430609_41432049_41432176_41435836_41436030_41437014_41437153_41439693_41439849_41440886_41441026_41441715_41441915_41443787_41443867_41445447_41445571_41445999_41446142_41449136_41449296_41451166_41451244_41452620_41452870_41458527
transcript_93267.known	chr21	-	3446	14	FSM	ENSG00000184012.14	ENST00000678171.1	3446	14	0	0	0	0	multi-exon	TRUE	canonical	1	1	junction_1	22.8858758541042	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507550	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41466150_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41494355_41494579_41498118_41498190_41508080
transcript_93268.known	chr21	-	3156	12	FSM	ENSG00000184012.14	ENST00000678743.1	3156	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	22.3543957257731	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CAAAAGAAAGAAGTTTATTG	-41507550	True	NA	NA	False	AATAAA	-24	NA	41508158	41464304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41466154_41467733_41467887_41468395_41468539_41470647_41470744_41471805_41471982_41473324_41473497_41476576_41476621_41479171_41479283_41480475_41480603_41488393_41488514_41489506_41489594_41508080
transcript_93277.known	chr21	-	3831	8	FSM	ENSG00000183421.12	ENST00000332512.8	3831	8	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_4	9.26481163833769	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGGTTGAGACTGCTTTTT	-41765937	True	NA	-5	True	AATAAA	-27	NA	41767052	41739372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41741998_41743881_41744141_41745758_41745863_41746612_41746772_41749153_41749204_41751096_41751246_41756524_41756817_41766859
transcript_93278.known	chr21	-	7452	3	FSM	ENSG00000173276.14	ENST00000310826.10	7452	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_2	3.5	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCAGTCTCAATGGTATGCC	-42008630	True	NA	0	True	AATAAA	-23	NA	42010360	41986830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_41994109_42002896_42002962_42010251
transcript_93279.known	chr21	+	588	2	FSM	ENSG00000237232.9	ENST00000675770.1	588	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTTGCCAAATTAACAGC	NA	False	NA	-8	True	ATTAAA	-3	NA	42009358	42011582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42009585_42011220
transcript_9328.known	chr1	-	6927	5	FSM	ENSG00000265808.4	ENST00000578049.4	6927	5	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	11.9687092035858	177	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAACTCGGTCCCCTTCTGTT	-120171624	True	NA	NA	False	TATAAA	-40	NA	120176520	120150897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_120157193_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_93281.known	chr21	-	419	2	FSM	ENSG00000160180.17	ENST00000489676.1	419	2	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	0	311	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTTCTGAGGTTGTGCTT	-42313373	True	NA	-1	True	AATAAA	-40	NA	42313686	42312052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42312270_42313484
transcript_93282.nic	chr21	-	403	2	ISM	ENSG00000160181.9	ENST00000291526.5	603	4	3296	0	3296	0	3prime_fragment	FALSE	canonical	1	1	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTCTTTTTGGTTTCATTAA	NA	False	NA	NA	False	AATAAA	-20	NA	42347698	42346356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_42346547_42347485
transcript_93283.known	chr21	-	492	3	FSM	ENSG00000160182.3	ENST00000291527.3	492	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGCTGTTCATTCTTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	42366535	42362281	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42362496_42363254_42363408_42366410
transcript_93288.known	chr21	-	1300	9	FSM	ENSG00000160188.10	ENST00000291536.8	1300	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	1.21834929310112	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGCCTCTGCTTCAAGTTCT	-42496170	True	NA	3	True	AATAAA	-28	NA	42496224	42472485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42472871_42475897_42476048_42477290_42477445_42482636_42482709_42485668_42485805_42486370_42486462_42492757_42492864_42492965_42493080_42496132
transcript_93296.known	chr21	+	449	3	FSM	ENSG00000239930.2	ENST00000416179.1	449	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACGAGATTCCAAAATTATG	42496520	True	NA	NA	False	AATAAA	-20	NA	42496538	42497443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42496666_42496822_42496934_42497232
transcript_93298.known	chr21	+	2192	20	FSM	ENSG00000160191.18	ENST00000291539.11	2192	20	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	35.2823985214917	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652377	True	NA	18	True	AATATA	-15	NA	42653620	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93300.known	chr21	+	1883	19	FSM	ENSG00000160191.18	ENST00000335512.8	1883	19	0	0	0	0	multi-exon	FALSE	canonical	3	71	junction_4	37.2379734500505	387	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652766	True	NA	18	True	AATATA	-15	NA	42653749	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93302.known	chr21	+	1963	19	FSM	ENSG00000160191.18	ENST00000398225.7	1963	19	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.663014598534	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93303.known	chr21	+	1783	18	FSM	ENSG00000160191.18	ENST00000398234.7	1783	18	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	56.147420884421	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42687916_42687995_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93305.known	chr21	+	1671	17	FSM	ENSG00000160191.18	ENST00000398224.3	1671	17	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_1	53.0871556381579	378	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42698967_42699012_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93307.known	chr21	+	1616	16	FSM	ENSG00000160191.18	ENST00000349112.7	1616	16	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_2	64.8847182830184	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652829	False	NA	18	True	AATATA	-15	NA	42653812	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42698967_42699012_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93315.nnic	chr21	+	902	5	NNC	ENSG00000160191.18	novel	794	5	NA	NA	-8	4	at_least_one_novel_splicesite	FALSE	canonical	3	12	junction_4	60.3173896981625	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCACTATTTCATGTATTTAA	42652497	False	NA	4	True	AATAAA	-15	NA	42653740	42701193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700627
transcript_93316.known	chr21	+	794	5	FSM	ENSG00000160191.18	ENST00000486902.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	57.7380940108002	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACATCACTATTTCATGTAT	42652795	True	NA	0	True	AATAAA	-11	NA	42653778	42701189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42686191_42686263_42687916_42687995_42698967_42699012_42700693
transcript_93320.known	chr21	+	1865	17	FSM	ENSG00000160191.18	ENST00000490803.5	1865	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.8166737638067	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652771	True	NA	18	True	AATATA	-15	NA	42653754	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42731769_42731950_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_93321.known	chr21	+	1661	16	FSM	ENSG00000160191.18	ENST00000467403.5	1661	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	53.0760460722788	377	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGTACTGTACTTCTTCTT	42652795	True	NA	18	True	AATATA	-15	NA	42653778	42775509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42653884_42732069_42732125_42733355_42733427_42743775_42743861_42751115_42751198_42753989_42754065_42758998_42759086_42760327_42760433_42760824_42760908_42762082_42762240_42765380_42765495_42768187_42768293_42769026_42769156_42770702_42770799_42772438_42772521_42775279
transcript_9333.nnic	chr1	-	805	5	NNC	ENSG00000265808.4	novel	2230	2	NA	NA	-25	-5	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	56.9670957658893	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCATGGTTGTTGCAGTG	NA	False	NA	-6	True	AATAAA	-14	NA	120176545	120157295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_120157444_120160383_120160531_120163209_120163371_120168839_120168950_120176306
transcript_93331.known	chr21	-	1471	12	FSM	ENSG00000160193.12	ENST00000330317.6	1471	12	0	0	0	0	multi-exon	FALSE	canonical	3	251	junction_1	60.2767721116381	518	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGGTGAGATTTACATTAT	-42874548	True	NA	-28	True	AGTAAA	-15	NA	42879531	42843093	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42843282_42850040_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_93332.known	chr21	-	759	8	FSM	ENSG00000160193.12	ENST00000479429.5	759	8	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	132.527548156631	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAGCTGCGGCGGCACCTC	-42874532	True	NA	NA	False	NA	NA	NA	42879515	42854561	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873602_42873692_42876701_42876768_42879406
transcript_93333.known	chr21	-	2106	11	FSM	ENSG00000160193.12	ENST00000398208.3	2106	11	0	0	0	0	multi-exon	FALSE	canonical	3	277	junction_8	50.2335545228486	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTGGTGCCTGCGCTGTGTG	-42874556	True	NA	-1	True	AATATA	-14	NA	42879539	42849225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42850243_42852254_42852325_42853568_42853753_42854561_42854627_42855681_42855781_42859661_42859723_42862281_42862395_42863439_42863597_42873550_42873692_42876701_42876768_42879406
transcript_93339.nnic	chr21	+	1692	5	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-62	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	211.924957237226	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCGCTGTGCATAAT	42884913	True	NA	11	True	AATAAA	-17	NA	42893205	42909100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42893382_42896926_42897048_42903181_42904277_42906839_42906903_42908863
transcript_93344.known	chr21	+	5725	4	FSM	ENSG00000160194.18	ENST00000354250.7	5725	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	239.338440056939	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTATATGCTAGGCACTAT	42885016	True	NA	77	True	AATAAA	-17	NA	42893308	42913299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42893382_42896926_42897048_42903181_42904277_42908863
transcript_93346.nnic	chr21	+	597	4	NNC	ENSG00000160194.18	novel	5725	4	NA	NA	-62	-5	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	230.236110692191	1468	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAAGGCCCGCTGTGCATAAT	42884913	True	NA	11	True	AATAAA	-17	NA	42893205	42909100	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42893382_42896926_42897048_42906839_42906903_42908863
transcript_93352.known	chr21	+	4676	3	FSM	ENSG00000160194.18	ENST00000340344.4	4676	3	0	0	0	0	multi-exon	FALSE	canonical	3	261	junction_2	148	891	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGCTAGGCACTATGCCTC	42884975	True	NA	82	True	AATAAA	-22	NA	42893267	42913304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42893382_42896926_42897048_42908863
transcript_93356.nnic	chr21	+	357	2	NNC	ENSG00000160194.18	novel	2029	6	NA	NA	-59	-20106	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	0	158	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATGTGGTAATGTGT	42879248	False	NA	8	True	AATAAA	-20	NA	42879584	42883825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_42879722_42883605
transcript_93357.nic	chr21	+	467	2	ISM	ENSG00000160194.18	ENST00000460259.1	2029	6	-25	25280	-25	-20106	5prime_fragment	FALSE	canonical	3	5	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGATATGTGGTAATGTGT	42879333	True	NA	8	True	AATAAA	-20	NA	42879618	42883825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_42879866_42883605
transcript_93359.known	chr21	+	2029	6	FSM	ENSG00000160194.18	ENST00000460259.1	2029	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	46.5317096182807	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTGTGCATAATCGGTT	42879358	True	NA	16	True	AATAAA	-22	NA	42879643	42909105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42879866_42883605_42883796_42886800_42886960_42896926_42897048_42903181_42904277_42908863
transcript_93361.known	chr21	-	2790	2	FSM	ENSG00000233056.4	ENST00000447535.2	2774	2	-16	0	-16	0	multi-exon	FALSE	canonical	3	133	junction_1	0	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACCGCCTCATGTTGTCTGT	-42925633	False	NA	-7	True	ATTAAA	-17	NA	42925646	42916802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_42919292_42925345
transcript_93369.known	chr21	+	1725	6	FSM	ENSG00000160199.15	ENST00000480179.1	1725	6	0	0	0	0	multi-exon	FALSE	canonical	3	152	junction_5	45.6447149185971	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	42972015	False	NA	NA	False	NA	NA	NA	42974661	43018051	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_42974665_43004325_43004433_43007490_43007619_43010052_43010225_43013067_43013239_43016907
transcript_93392.nic	chr21	-	2320	18	NIC	ENSG00000160200.18	novel	2353	18	NA	NA	-10	0	combination_of_known_junctions	FALSE	canonical	3	860	junction_1	371.543437503015	3076	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075782	False	NA	NA	False	TATAAA	-14	NA	43075874	43053190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_93393.known	chr21	-	2353	18	FSM	ENSG00000160200.18	ENST00000359624.7	2353	18	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_17	595.333345603573	2823	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43076270	False	NA	NA	False	TATAAA	-14	NA	43076362	43053190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43053648_43053861_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43076224
transcript_934.known	chr1	+	1257	8	FSM	ENSG00000169972.12	ENST00000379031.10	1257	8	0	0	0	0	multi-exon	TRUE	canonical	3	332	junction_1	29.9829883740219	140	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	1304240	True	NA	17	True	AATAAA	-17	NA	1308596	1311677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1308721_1308914_1308973_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_93413.known	chr21	-	2453	17	FSM	ENSG00000160200.18	ENST00000398158.5	2453	17	0	0	0	0	multi-exon	FALSE	canonical	3	142	junction_16	525.313950027743	3183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075739	False	NA	NA	False	TATAAA	-14	NA	43075831	43053190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073304_43075769
transcript_93414.known	chr21	-	2495	17	FSM	ENSG00000160200.18	ENST00000398165.8	2495	17	0	0	0	0	multi-exon	FALSE	canonical	3	1625	junction_13	236.173524328511	3447	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGGCCTCGTGTCTAACT	-43075743	False	NA	NA	False	TATAAA	-14	NA	43075835	43053190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43053984_43056802_43056888_43058144_43058254_43058833_43058969_43059225_43059304_43060440_43060547_43062310_43062396_43062952_43063079_43063899_43063992_43065202_43065273_43065386_43065522_43065615_43065696_43066242_43066378_43068508_43068616_43071984_43072202_43073265_43073342_43075769
transcript_93439.known	chr21	-	683	4	FSM	ENSG00000160200.18	ENST00000465732.5	683	4	0	0	0	0	multi-exon	FALSE	canonical	3	1686	junction_3	170.301693082208	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGTGACCAAAGTGACT	-43075772	False	NA	NA	False	AAAACA	-20	NA	43075864	43068320	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43068616_43071984_43072202_43073265_43073342_43075769
transcript_9345.nnic	chr1	-	709	3	NNC	ENSG00000223804.5	novel	715	3	NA	NA	-191	11362	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	6.5	32	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGGTGTGGGCAGACATT	-120341677	True	NA	NA	False	AATAAA	-16	NA	120342062	120255971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_120256227_120258775_120258884_120341716
transcript_9346.known	chr1	-	715	3	FSM	ENSG00000223804.5	ENST00000616141.4	715	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	-120341836	False	NA	NA	False	AATAAA	-34	NA	120341871	120267333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_120267839_120340755_120340811_120341716
transcript_9347.known	chr1	-	625	2	FSM	ENSG00000223804.5	ENST00000617318.4	625	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATCCAGGCGTGATGGTAT	-120341804	False	NA	NA	False	AATAAA	-31	NA	120341839	120267336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_120267839_120341716
transcript_9348.known	chr1	+	162	1	FSM	ENSG00000273727.1	ENST00000614085.1	162	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGAGGTTGTAGTGCAAAAAG	120354644	True	NA	NA	False	NA	NA	NA	120354986	120355148	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120355000_120355100
transcript_93482.known	chr21	-	945	8	FSM	ENSG00000160201.12	ENST00000291552.9	945	8	0	0	0	0	multi-exon	FALSE	canonical	3	3780	junction_6	906.719473752292	27318	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101246	True	NA	NA	False	AATAAA	-20	NA	43107570	43092955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43104314_43104403_43107450
transcript_93483.known	chr21	-	940	8	FSM	ENSG00000160201.12	ENST00000380276.6	940	8	0	0	0	0	multi-exon	FALSE	canonical	3	2363	junction_5	1553.2902799791	28361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101241	True	NA	NA	False	AATAAA	-20	NA	43107565	43092955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43101365_43101433_43104314_43104403_43107450
transcript_93484.known	chr21	-	966	9	FSM	ENSG00000160201.12	ENST00000464750.5	966	9	0	0	0	0	multi-exon	FALSE	canonical	3	279	junction_6	1982.79931142186	16135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTTGGTGTAACTTATTTC	-43101200	False	NA	NA	False	AATAAA	-20	NA	43107524	43092955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43093250_43094470_43094564_43094654_43094789_43095437_43095537_43095693_43095744_43100452_43100520_43101365_43101433_43104314_43104403_43107450
transcript_93487.known	chr21	-	1900	9	FSM	ENSG00000160207.9	ENST00000291560.7	1900	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	2.75850956133924	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCCTTGCTGTCTAAAATCTA	-43659226	True	NA	NA	False	AATAAA	-26	NA	43659488	43529185	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43529963_43592224_43592329_43613829_43613948_43630321_43630455_43633271_43633422_43644288_43644393_43656586_43656738_43658060_43658321_43659385
transcript_93489.nic	chr21	-	771	4	ISM	ENSG00000160207.9	ENST00000443485.1	989	7	-43	30310	-25	-30310	5prime_fragment	FALSE	canonical	2	5	junction_1	2.49443825784929	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATTCTGAGTGGGTTGGA	-43659251	True	NA	NA	False	AATAAA	-18	NA	43659513	43644160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_43644393_43656586_43656738_43658060_43658321_43659385
transcript_9349.known	chr1	+	1111	5	FSM	ENSG00000286106.2	ENST00000624419.2	1111	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	7.56637297521078	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTGACATTAACAGTAGGTGA	120723817	True	NA	NA	False	AATAAA	-16	NA	120723945	120793874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120724251_120763627_120763710_120784973_120785234_120793160_120793497_120793746
transcript_93496.known	chr21	+	7341	11	FSM	ENSG00000160209.19	ENST00000291565.9	7341	11	0	0	0	0	multi-exon	FALSE	canonical	3	553	junction_5	42.7546488700352	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTTGAGGCATGATGGTT	43709674	True	NA	10	True	AATAAA	-16	NA	43719128	43762299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_43719382_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_93501.nic	chr21	+	1106	11	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-44	0	combination_of_known_junctions	TRUE	canonical	3	51	junction_1	174.018418565392	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTTTTCTTTCATGA	43728495	True	NA	-76	True	AAAACA	-35	NA	43728855	43756162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_93502.nic	chr21	+	1199	11	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-44	0	combination_of_known_junctions	FALSE	canonical	3	51	junction_1	174.018418565392	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATTTGTGATCTGAAAAC	43728495	True	NA	17	True	NA	NA	NA	43728855	43756255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43729011_43734068_43734124_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_93503.nic	chr21	+	1012	10	NIC	ENSG00000160209.19	novel	1069	9	NA	NA	-91	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	195.676667042066	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATATTTTTTTCTTTCATGA	43740914	False	NA	-76	True	AAAACA	-35	NA	43740924	43756162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_43741041_43741666_43741772_43743723_43743808_43746078_43746126_43748994_43749081_43750499_43750546_43752517_43752630_43753582_43753720_43755697_43755765_43755950
transcript_93509.known	chr21	-	1855	2	FSM	ENSG00000160213.9	ENST00000639959.1	1855	2	0	0	0	0	multi-exon	FALSE	canonical	1	32	junction_1	0	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGGTCTGGTTTAAATA	-43776218	False	NA	-6	True	AATAAA	-14	NA	43776238	43772510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43774331_43776203
transcript_93510.known	chr21	-	588	3	FSM	ENSG00000160213.9	ENST00000291568.7	588	3	0	0	0	0	multi-exon	FALSE	canonical	3	1297	junction_1	5	22540	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAGATTGCCTCCTTTGTTTT	-43748016	True	NA	-9	True	AATAGA	-20	NA	43776308	43773949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43774331_43774657_43774760_43776203
transcript_93511.known	chr21	-	1258	3	FSM	ENSG00000160213.9	ENST00000675996.1	1258	3	0	0	0	0	multi-exon	FALSE	canonical	2	82	junction_2	607.5	1183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACATTCACGCACTTTATGC	-43748038	True	NA	22	True	AGTAAA	-37	NA	43776330	43773665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_43774331_43774657_43774760_43775839
transcript_93517.known	chr21	+	3188	21	FSM	ENSG00000241945.8	ENST00000291576.12	3188	21	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_15	98.1088171368914	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTGCTGTCTTGTGGGGGC	44102907	True	NA	89	True	ATTAAA	-16	NA	44107398	44131181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44107435_44108983_44109097_44113752_44113848_44114178_44114279_44114624_44114769_44115263_44115400_44115690_44115921_44117819_44117964_44118762_44118834_44119386_44119524_44120347_44120497_44120630_44120779_44120951_44121103_44122176_44122358_44124579_44124728_44126010_44126120_44126899_44126966_44127931_44128151_44128246_44128398_44128551_44128627_44130596
transcript_93523.nic	chr21	+	1036	8	NIC	ENSG00000160221.18	novel	1584	7	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_6	367.925735629863	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	NA	False	NA	NA	False	AATAAA	-29	NA	44133588	44145723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820_44144917_44145570
transcript_93525.known	chr21	+	1584	7	FSM	ENSG00000160221.18	ENST00000291577.11	1584	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	305.749716089629	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTGTGCTGCATTCATCTG	44128396	True	NA	NA	False	AATAAA	-17	NA	44133682	44145711	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_93529.known	chr21	+	1077	6	FSM	ENSG00000160221.18	ENST00000427803.6	1077	6	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_5	316.825125266289	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	NA	False	NA	NA	False	ATTAAA	-19	NA	44133617	44141417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44140941
transcript_9353.nnic	chr1	-	1205	5	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-370	1517	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	5.31507290636732	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	NA	False	NA	NA	False	AATAAA	-16	NA	121052537	121028074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_121028292_121035063_121035252_121036413_121036466_121037561_121037798_121052025
transcript_93531.known	chr21	+	694	6	FSM	ENSG00000160221.18	ENST00000389690.7	694	6	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_5	315.244032457396	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	44128492	False	NA	NA	False	ATTAAA	-19	NA	44133778	44141417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44141163
transcript_93533.known	chr21	+	1506	6	FSM	ENSG00000160221.18	ENST00000348499.9	1506	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	406.78957705428	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCATCTGTGTGTTCAGGGT	44128393	True	NA	NA	False	AATAAA	-29	NA	44133679	44145723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44143204_44143362_44144820
transcript_93539.known	chr21	+	807	5	FSM	ENSG00000160221.18	ENST00000480786.1	807	5	0	0	0	0	multi-exon	FALSE	canonical	3	759	junction_4	54.1589097009901	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCTTCTCCCAAGCCCCTTA	44128387	True	NA	NA	False	NA	NA	NA	44133673	44140604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44134101_44134155_44136059_44136174_44137176_44137297_44140249
transcript_93541.known	chr21	+	781	5	FSM	ENSG00000160221.18	ENST00000493883.5	781	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	394.779922868426	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGCCCCTGGCAGGTGAACC	44128352	True	NA	NA	False	ATTAAA	-19	NA	44133638	44141417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44133839_44136059_44136174_44137176_44137297_44140249_44140343_44141163
transcript_93542.known	chr21	+	1215	6	FSM	ENSG00000160221.18	ENST00000495007.5	1215	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	330.047632925916	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGGCTGCTTTCCATCCAGCT	NA	False	NA	NA	False	NA	NA	NA	44133615	44145012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44134155_44136059_44136174_44137176_44137297_44140249_44140343_44143204_44143362_44144820
transcript_93543.known	chr21	+	235	1	FSM	ENSG00000278158.1	ENST00000619053.1	235	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCCGTGGGAAGTCAACAT	NA	False	NA	NA	False	TTTAAA	-17	NA	44241846	44242081	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44241800_44242100
transcript_93545.known	chr21	+	2907	22	FSM	ENSG00000141959.17	ENST00000349048.9	2907	22	0	0	0	0	multi-exon	FALSE	canonical	3	981	junction_11	84.8875473294521	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCACAGCCTGCAGAACTCCT	44287018	True	NA	40	True	AATAAA	-37	NA	44300052	44327373	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312295_44312977_44313144_44313637_44313683_44313912_44314022_44316243_44316340_44316431_44316525_44318469_44318596_44319350_44319416_44320083_44320148_44321728_44321876_44322132_44322204_44322961_44323050_44323765_44323919_44324490_44324656_44324855_44324918_44325152_44325265_44325960_44326061_44326158_44326265_44326714
transcript_93546.nnic	chr21	+	790	5	NNC	ENSG00000141959.17	novel	5986	20	NA	NA	5	-6	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	477.864716734768	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CGGAGAGCACAGCCTGCAGA	44287037	True	NA	34	True	AATAAA	-31	NA	44300071	44327367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312142_44326885
transcript_93547.nnic	chr21	+	799	5	NNC	ENSG00000141959.17	novel	5986	20	NA	NA	5	-2	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_4	477.864716734768	47	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACAGCCTGCAGAACTC	44287037	True	NA	38	True	AATAAA	-35	NA	44300071	44327371	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_44300191_44306680_44306755_44311005_44311084_44312104_44312152_44326890
transcript_93550.known	chr21	-	1283	7	FSM	ENSG00000160226.16	ENST00000325223.7	1283	7	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_2	11.5674351329738	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGAGGTGACGTTTCC	-44339375	False	NA	-12	True	AATAAA	-17	NA	44339402	44329890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44330327_44330822_44330917_44331842_44332015_44333032_44333263_44335757_44335805_44337648_44337668_44339117
transcript_93552.nic	chr21	-	751	3	ISM	ENSG00000160226.16	ENST00000397956.7	1634	7	119	5339	116	-3268	5prime_fragment	FALSE	canonical	3	61	junction_1	1.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCAGGCAGTTGGGGTGT	-44338178	True	NA	NA	False	AATGAA	-15	NA	44339274	44335229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_-_44335805_44337648_44337668_44339117
transcript_93563.nnic	chr21	+	1686	2	Fusion	ENSG00000235890.2_ENSG00000228709.2	novel	1856	2	NA	NA	-54	-8090	multi-exon	FALSE	canonical	3	22	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTTTCTGTGTTTCATAA	44482786	True	NA	14	True	ATTAAA	-23	NA	44485431	44507533	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr21_+_44486231_44506646
transcript_93564.known	chr21	+	912	2	FSM	ENSG00000228709.2	ENST00000449713.2	1856	2	91	853	91	-853	multi-exon	FALSE	canonical	3	26	junction_1	0	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGCTGGGTAGAAGAGGGTG	44482931	False	NA	NA	False	TTTAAA	-16	NA	44485576	44490288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44486231_44490030
transcript_93565.nnic	chr21	+	1516	2	NNC	ENSG00000228709.2	novel	1856	2	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	0	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGATTACGCACTCAGAAAAA	44482817	True	NA	8	True	AATAAA	-16	NA	44485462	44491141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_44486231_44490393
transcript_93566.known	chr21	+	823	3	FSM	ENSG00000182912.6	ENST00000330490.3	823	3	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	4.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTGATAACGTTTCA	NA	False	NA	8	True	GATAAA	-22	NA	44517215	44518756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44517836_44518258_44518333_44518627
transcript_93568.nnic	chr21	+	535	3	NNC	ENSG00000182912.6	novel	823	3	NA	NA	-65	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	7	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTTGTGTGATAACGTTTCA	44517479	True	NA	8	True	GATAAA	-22	NA	44517551	44518756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr21_+_44517836_44518210_44518333_44518627
transcript_93569.known	chr21	+	2422	2	FSM	ENSG00000182912.6	ENST00000354333.5	2422	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCACAGCTTCTTGTCTAAT	44517544	True	NA	4	True	CATAAA	-16	NA	44517616	44520830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44517836_44518627
transcript_93572.known	chr21	-	721	7	FSM	ENSG00000184787.19	ENST00000330942.9	721	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_5	241.281301941669	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCTGGTACCAAACAAGGCA	-44792543	True	NA	-42	True	NA	NA	NA	44801774	44771294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_93576.known	chr21	-	424	5	FSM	ENSG00000184787.19	ENST00000490450.5	424	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	268.73255757351	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATAATATTATCAGCCAC	-44792537	True	NA	NA	False	NA	NA	NA	44801768	44777253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801283_44801399_44801705
transcript_93579.known	chr21	-	933	4	FSM	ENSG00000184787.19	ENST00000497630.5	933	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	234.311758134328	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCCTGGTTCCCTGTGG	-44792588	True	NA	NA	False	NA	NA	NA	44801819	44770930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44801705
transcript_93582.known	chr21	-	1512	2	FSM	ENSG00000184787.19	ENST00000490091.1	1512	2	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGACTGGCTGTTTCCCCATC	-44792577	True	NA	NA	False	AATAAA	-18	NA	44801808	44799989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44801399_44801705
transcript_93584.known	chr21	-	3367	6	FSM	ENSG00000184787.19	ENST00000345496.7	3367	6	0	0	0	0	multi-exon	FALSE	canonical	3	494	junction_2	34.9536836399256	492	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGCTGTTTCTGTTTTGGT	-44792589	True	NA	1	True	AATAAA	-24	NA	44801820	44768579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44771490_44773546_44773688_44777298_44777418_44787919_44787966_44788059_44788096_44801705
transcript_93585.known	chr21	-	762	4	FSM	ENSG00000184787.19	ENST00000462569.5	762	4	0	0	0	0	multi-exon	FALSE	canonical	3	531	junction_1	26.1278905896872	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCACAGTTCCACATGGCTG	-44792570	True	NA	NA	False	TATAAA	-19	NA	44801801	44776833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44777418_44787919_44787966_44788059_44788096_44801705
transcript_93587.known	chr21	-	1736	4	FSM	ENSG00000184900.16	ENST00000479153.1	1736	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	610.482504981829	951	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	NA	False	NA	-34	True	AGTAAA	-20	NA	44818779	44805616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44818668
transcript_93589.known	chr21	-	1740	4	FSM	ENSG00000184900.16	ENST00000332859.11	1740	4	0	0	0	0	multi-exon	FALSE	canonical	3	1282	junction_3	7.36357401145817	1458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806171	True	NA	-34	True	AGTAAA	-20	NA	44818062	44805616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44807041_44809046_44809119_44813975_44814105_44817947
transcript_93590.known	chr21	-	1779	4	FSM	ENSG00000184900.16	ENST00000397898.7	1779	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	606.235011269465	910	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTGGCTTCTACTAAACAC	-44806160	True	NA	-34	True	AGTAAA	-20	NA	44818051	44805616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44807041_44808996_44809119_44813975_44814105_44817947
transcript_93592.known	chr21	-	2600	6	FSM	ENSG00000183255.12	ENST00000330938.8	2600	6	0	0	0	0	multi-exon	FALSE	canonical	3	854	junction_2	33.2686038180144	455	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGTTTAGTATGCTGCG	-44865416	True	NA	-15	True	AATAAA	-16	NA	44873690	44849597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44851628_44855209_44855257_44856192_44856365_44861162_44861272_44865394_44865448_44873501
transcript_93593.known	chr21	-	1033	4	FSM	ENSG00000183250.13	ENST00000330551.3	1033	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.16024689946929	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTCAAGGGTCAATAGTCACA	-44939524	True	NA	NA	False	AGTAAA	-24	NA	44939845	44934724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44935097_44935626_44935891_44937538_44937683_44939592
transcript_93594.known	chr21	-	3534	3	FSM	ENSG00000183250.13	ENST00000663249.1	3534	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACCTGAAACTCCTGAAAAT	-44939610	True	NA	NA	False	NA	NA	NA	44939931	44933314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44935097_44935626_44935891_44938443
transcript_93595.known	chr21	-	2348	3	FSM	ENSG00000183250.13	ENST00000660377.2	2403	3	55	0	27	0	multi-exon	FALSE	canonical	1	5	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCTGAAAATCTTGAAAT	-44939565	True	NA	NA	False	NA	NA	NA	44939886	44933306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_44935097_44935626_44935891_44939592
transcript_93597.known	chr21	+	880	6	FSM	ENSG00000160256.13	ENST00000397826.7	880	6	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_2	72.9492974606336	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCACAGGGCTGGGCACACC	44928283	True	NA	4	True	NA	NA	NA	44940011	44976989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44940187_44943683_44943793_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_93598.known	chr21	+	892	6	FSM	ENSG00000160256.13	ENST00000291634.11	892	6	0	0	0	0	multi-exon	FALSE	canonical	3	181	junction_2	69.8896272704326	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTGCTTCCCTGATTCA	44928300	True	NA	-12	True	AATAAA	-42	NA	44940028	44976973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44940187_44943683_44943838_44960099_44960169_44967033_44967182_44973196_44973266_44976679
transcript_93600.known	chr21	+	443	1	FSM	ENSG00000276529.1	ENST00000616815.1	443	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	45	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTCTTGTCTGGTTGTGG	44978812	True	NA	34	True	AATAAA	-36	NA	44978831	44979274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_44978800_44979300
transcript_93602.known	chr21	+	587	4	FSM	ENSG00000197381.17	ENST00000462214.5	587	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	7.71722460186015	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTGATCCTGATATGTC	45073392	False	NA	NA	False	NA	NA	NA	45073852	45137326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45073904_45128401_45128574_45134714_45134833_45137080
transcript_93606.known	chr21	-	598	2	FSM	ENSG00000186866.17	ENST00000476653.1	598	2	0	0	0	0	multi-exon	FALSE	canonical	3	187	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTCCCAAAATGTTTCTC	-45286035	True	NA	NA	False	NA	NA	NA	45287892	45285482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45285929_45287740
transcript_93610.known	chr21	+	7540	3	FSM	ENSG00000223768.3	ENST00000400362.3	7540	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	4	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCATACAACTATATATTACA	45287114	True	NA	NA	False	TATAAA	-45	NA	45288049	45297806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45288166_45289350_45289439_45290470
transcript_93612.known	chr21	+	389	3	FSM	ENSG00000223768.3	ENST00000454115.7	480	3	17	74	2	-74	multi-exon	FALSE	canonical	2	6	junction_1	2.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGACCTCAGTCGGACACA	45287116	True	NA	NA	False	NA	NA	NA	45288051	45290578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45288245_45289350_45289439_45290470
transcript_93618.known	chr21	+	4397	4	FSM	ENSG00000223768.3	ENST00000647108.1	4397	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.64279609239471	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTGTAGATGTGTGTGT	45287126	True	NA	17	True	TATAAA	-17	NA	45288061	45297354	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45288166_45289350_45289439_45290470_45293523_45296201
transcript_93619.nnic	chr21	-	819	2	Genic_Genomic	ENSG00000273796.1	novel	561	1	NA	NA	-574	0	multi-exon	FALSE	canonical	3	23	junction_1	0	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAGTAGAAGTGGTCA	-45404762	True	NA	-2	True	AATAAA	-17	NA	45404943	45403808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr21_-_45404497_45404812
transcript_93620.known	chr21	-	561	1	FSM	ENSG00000273796.1	ENST00000617004.1	561	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAGAGTAGAAGTGGTCA	-45404354	False	NA	-2	True	AATAAA	-17	NA	45404369	45403808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45403800_45404400
transcript_93621.known	chr21	-	4991	6	FSM	ENSG00000173638.19	ENST00000311124.9	4991	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	84.7891502493096	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTTTGGCTTCCTTTTATT	-45536776	True	NA	-21	True	AATACA	-1	NA	45542440	45512564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45516141_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_93622.known	chr21	-	1884	6	FSM	ENSG00000173638.19	ENST00000380010.8	1884	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	101.871683995112	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGCAGGGCTTCTGATT	-45536807	True	NA	-5	True	ATTAAA	-15	NA	45542471	45514714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_45515153_45525816_45525959_45530769_45530972_45531388_45532149_45537770_45538009_45542367
transcript_93627.nnic	chr21	+	455	2	FSM	ENSG00000233922.4	ENST00000685333.1	450	2	-5	0	-5	0	multi-exon	FALSE	canonical	2	3	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTGTGTGATGGTGAGAAG	45590568	True	NA	NA	False	NA	NA	NA	45590765	45596654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45590957_45596390
transcript_93628.nnic	chr21	+	771	2	FSM	ENSG00000233922.4	ENST00000685333.1	450	2	-5	-316	-5	-78	multi-exon	FALSE	canonical	2	3	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAAATCGGGCTTGTCCTGA	45590568	True	NA	NA	False	AATGAA	-22	NA	45590765	45596970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45590957_45596390
transcript_93629.known	chr21	+	6721	2	FSM	ENSG00000233922.4	ENST00000441095.2	6721	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTTGGGTTGATGAAATATC	45593616	True	NA	NA	False	AATATA	-15	NA	45593653	45603056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45593709_45596390
transcript_93630.known	chr21	+	465	1	FSM	ENSG00000274248.1	ENST00000621707.1	465	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGCTTGGAGGGCTTGGGT	45974475	False	NA	9	True	AATAAA	-19	NA	45974488	45974953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_45974500_45975000
transcript_93636.nic	chr21	+	1257	5	ISM	ENSG00000142173.16	ENST00000310645.9	3446	28	-7	15365	0	1491	5prime_fragment	FALSE	canonical	3	275	junction_1	71.0892924426738	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAAAGAAAGCCACATTTAA	46092894	True	NA	NA	False	NA	NA	NA	46098111	46114440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46098174_46111449_46111592_46111978_46112578_46112803_46112825_46114007
transcript_93638.known	chr21	-	1255	5	FSM	ENSG00000160282.15	ENST00000460011.6	1255	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	10.6066017177982	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCACTATACTCTCAAATT	NA	False	NA	-15	True	ATTAAA	-14	NA	46142741	46136266	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46136495_46136914_46137074_46137238_46137335_46138507_46138647_46142108
transcript_93639.known	chr21	-	1182	4	FSM	ENSG00000160284.15	ENST00000330205.10	1182	4	0	0	0	0	multi-exon	FALSE	canonical	3	474	junction_2	40.0998753115268	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTGGCTCTTTGAGGGCG	-46175986	True	NA	1	True	ATTAAA	-27	NA	46184476	46161147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46161706_46161915_46162068_46168307_46168659_46184355
transcript_93643.known	chr21	-	4886	22	FSM	ENSG00000160285.15	ENST00000397728.8	4886	22	0	0	0	0	multi-exon	TRUE	canonical	3	282	junction_21	55.9636665416868	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTGAATTCAGATTATTT	-46227347	False	NA	-1	True	ATTAAA	-17	NA	46228774	46188445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433_46228600_46228731
transcript_93644.known	chr21	-	2523	22	FSM	ENSG00000160285.15	ENST00000522411.5	2523	22	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_18	109.743692322316	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTTTTTTCTGACCAATAGC	-46227354	False	NA	NA	False	NA	NA	NA	46228781	46190782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222662_46222739_46227551_46227691_46228433_46228600_46228731
transcript_93645.known	chr21	-	4390	21	FSM	ENSG00000160285.15	ENST00000457828.6	4390	21	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_5	28.111341127737	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCACACTGTGTTTCGT	-46227397	False	NA	-6	True	AATAAA	-26	NA	46228824	46189123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46191236_46191880_46191960_46194490_46194662_46195675_46195757_46196201_46196268_46205835_46205942_46206671_46206769_46207427_46207578_46208250_46208302_46209553_46209626_46210687_46210745_46213024_46213053_46213737_46213836_46215179_46215299_46215684_46215794_46216388_46216525_46219475_46219573_46221853_46221976_46222629_46222739_46227551_46227691_46228433
transcript_93648.known	chr21	+	557	2	FSM	ENSG00000228404.1	ENST00000415026.1	557	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCTCTTAAAATATCTGTTT	NA	False	NA	NA	False	ATTAAA	-16	NA	46185078	46188941	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46185188_46188493
transcript_93663.known	chr21	+	2302	3	FSM	ENSG00000215424.10	ENST00000432735.5	2302	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	11	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	46228322	True	NA	NA	False	GATAAA	-41	NA	46229233	46242999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46236223_46236327_46240833
transcript_93665.known	chr21	+	703	3	FSM	ENSG00000215424.10	ENST00000590829.5	703	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCAGTGAGCAGAGATC	46228305	True	NA	NA	False	NA	NA	NA	46229216	46259390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46240833_46241020_46258923
transcript_93670.known	chr21	+	2193	2	FSM	ENSG00000215424.10	ENST00000444998.1	2193	2	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CACACACAAAAAAACAAAAA	46228328	True	NA	NA	False	GATAAA	-41	NA	46229239	46242999	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229267_46240833
transcript_93671.known	chr21	+	2424	3	FSM	ENSG00000215424.10	ENST00000662666.1	2424	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	4	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATCTAATTCTATATTTGAA	46228354	True	NA	NA	False	TTTAAA	-31	NA	46229265	46251725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46229364_46240833_46241020_46249585
transcript_93678.known	chr21	+	534	5	FSM	ENSG00000182362.14	ENST00000397694.5	534	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	125.636380081567	336	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46284190	True	NA	9	True	AATAAA	-16	NA	46286383	46297723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46286989_46291333_46291463_46296161_46296231_46297538
transcript_93681.known	chr21	+	739	5	FSM	ENSG00000182362.14	ENST00000397701.9	739	5	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	26.6364412037344	2128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284148	True	NA	37	True	AATAAA	-44	NA	46286341	46297751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_93691.known	chr21	+	764	5	FSM	ENSG00000182362.14	ENST00000397691.1	764	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	118.592527167609	568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46285826	True	NA	37	True	AATAAA	-44	NA	46286644	46297751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286744_46286869_46287124_46291333_46291463_46296161_46296231_46297538
transcript_93693.known	chr21	+	433	4	FSM	ENSG00000182362.14	ENST00000397692.5	433	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	137.528178930719	324	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46286989_46296161_46296231_46297538
transcript_93696.nic	chr21	+	762	4	NIC	ENSG00000182362.14	novel	739	5	NA	NA	-180	0	combination_of_known_junctions	FALSE	canonical	3	70	junction_2	106.887271875041	515	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGAGGGGAACCTCCTCTTAT	46286083	False	NA	9	True	AATAAA	-16	NA	46286161	46297723	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_46286416_46286869_46287124_46296161_46296231_46297538
transcript_9370.nnic	chr1	-	1017	4	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-370	1517	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	5.71547606649408	27	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	NA	False	NA	NA	False	AATAAA	-16	NA	121052537	121028074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_121028292_121036413_121036466_121037561_121037798_121052025
transcript_93700.known	chr21	+	890	4	FSM	ENSG00000182362.14	ENST00000339195.10	890	4	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	120.932488052908	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTTGCATCGGGTATTTTTC	46284190	True	NA	37	True	AATAAA	-44	NA	46286383	46297751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286738_46286869_46287124_46296161_46296231_46297538
transcript_93703.known	chr21	+	912	3	FSM	ENSG00000182362.14	ENST00000468924.5	912	3	0	0	0	0	multi-exon	FALSE	canonical	3	252	junction_1	8.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAAGCAGAAAGGCTGGAGT	46284161	True	NA	NA	False	NA	NA	NA	46286354	46291930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286416_46286869_46287124_46291333
transcript_93706.known	chr21	+	1402	3	FSM	ENSG00000182362.14	ENST00000492864.1	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	102	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGGTTGTACTATTGACG	46284260	False	NA	NA	False	AAAACA	-16	NA	46286453	46292197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46286738_46286869_46287124_46291333
transcript_9371.nnic	chr1	+	723	3	NNC	ENSG00000226067.7	novel	692	3	NA	NA	-83	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	42	29	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913085	False	NA	NA	False	AATAAA	-28	NA	120913100	120953460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_120913451_120952438_120952574_120953222
transcript_93713.known	chr21	-	1109	3	FSM	ENSG00000160307.10	ENST00000291700.9	1109	3	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	1.5	86	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCGAGGCAGGTGGATCAC	-46604928	True	NA	NA	False	AATAAA	-18	NA	46605082	46598603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_-_46599504_46602277_46602417_46605012
transcript_93716.known	chr21	+	2354	12	FSM	ENSG00000160310.19	ENST00000355680.8	2354	12	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_11	196.111454227791	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627855	True	NA	NA	False	ATTAAA	-16	NA	46635673	46665124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_93718.known	chr21	+	2131	11	FSM	ENSG00000160310.19	ENST00000397638.6	2131	11	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_10	193.920499174275	134	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGTGTATCCTGTTTTATGC	46627796	True	NA	24	True	AATAAA	-24	NA	46635614	46664951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832_46660963_46661799_46661937_46663382_46663555_46664294
transcript_9372.nnic	chr1	+	786	3	NIC	ENSG00000226067.7	novel	692	3	NA	NA	-91	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_2	29.5	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913077	True	NA	NA	False	AATAAA	-28	NA	120913092	120953460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_120913451_120952438_120952626_120953219
transcript_93723.known	chr21	+	1932	9	FSM	ENSG00000160310.19	ENST00000440086.5	1932	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	244.17450214959	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTGGGTGCAGTGGCTTAC	46627862	True	NA	NA	False	ATTAAA	-16	NA	46635680	46665124	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46661799_46661937_46663382_46663555_46664294
transcript_93725.nic	chr21	+	1582	9	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-59	3854	0	0	5prime_fragment	FALSE	canonical	3	246	junction_8	191.738061883915	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	46627796	True	NA	3	True	AATAAA	-16	NA	46635614	46661270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_9373.known	chr1	+	692	3	FSM	ENSG00000226067.7	ENST00000613486.2	692	3	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	32.5	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913168	False	NA	NA	False	AATAAA	-28	NA	120913183	120953460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120913451_120952438_120952626_120953222
transcript_93730.nic	chr21	+	1475	8	ISM	ENSG00000160310.19	ENST00000397638.6	2131	11	-2	3681	-2	0	5prime_fragment	FALSE	canonical	3	246	junction_7	164.18344643	130	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGGTATTTGCATTACAG	46627794	True	NA	3	True	AATAAA	-16	NA	46635612	46661270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46658744_46658921_46660832
transcript_93731.known	chr21	+	1874	8	FSM	ENSG00000160310.19	ENST00000458387.6	1874	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_6	248.170859510548	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAATATAGGCTGGGTGCAGT	46635561	False	NA	NA	False	ATTAAA	-9	NA	46635594	46665117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46663382_46663555_46664294
transcript_9374.known	chr1	+	821	3	FSM	ENSG00000226067.7	ENST00000621058.5	821	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	16	159	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	120913205	False	NA	NA	False	AATAAA	-31	NA	120913220	120953463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120913451_120952438_120952786_120953219
transcript_93740.nic	chr21	+	1159	7	NIC	ENSG00000160310.19	novel	1011	7	NA	NA	-2	190	combination_of_known_junctions	FALSE	canonical	3	34	junction_6	232.132445431961	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTACAACCACATTATGACGA	46627794	True	NA	NA	False	AATAAA	-16	NA	46635612	46653142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46652844
transcript_93744.known	chr21	+	1011	7	FSM	ENSG00000160310.19	ENST00000291705.11	1011	7	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	234.908315448106	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGTCAGGGTCCTTCACAGAC	46627823	True	NA	NA	False	NA	NA	NA	46635641	46664473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574_46649740_46664294
transcript_93747.nic	chr21	+	1117	7	ISM	ENSG00000160310.19	ENST00000355680.8	2354	12	-59	15236	0	0	5prime_fragment	FALSE	canonical	3	263	junction_1	188.620135604753	781	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGCTCAGTGTCTTGAA	46627796	True	NA	NA	False	NA	NA	NA	46635614	46649888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr21_+_46635764_46636438_46636548_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_9375.nnic	chr1	+	1068	3	NNC	ENSG00000226067.7	novel	821	3	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_2	25	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	120913077	True	NA	NA	False	AATAAA	-31	NA	120913092	120953463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_120913451_120952438_120952905_120953219
transcript_93751.known	chr21	+	954	6	FSM	ENSG00000160310.19	ENST00000397628.5	954	6	0	0	0	0	multi-exon	FALSE	canonical	3	448	junction_1	93.3372380135603	1552	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCAGTGTCTTGAATTTTC	46627855	True	NA	NA	False	NA	NA	NA	46635673	46649893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr21_+_46635764_46636895_46636991_46643534_46643640_46644305_46644489_46648457_46648620_46649574
transcript_93763.known	chr22	+	1175	4	FSM	ENSG00000235478.6	ENST00000441544.3	1231	4	55	1	9	0	multi-exon	FALSE	canonical	0	0	junction_1	1.4142135623731	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCGATGCACTCAGTCTTTT	17121555	False	NA	NA	False	ATTAAA	-20	NA	17121594	17132104	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17122040_17124654_17124772_17130361_17130485_17131614
transcript_93765.nic	chr22	-	2234	8	NIC	ENSG00000069998.12	novel	1735	8	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	3	89	junction_7	419.31640189475	331	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTCTTGTGAAGCTCTGTC	-17159024	False	NA	-12	True	AATAAA	-28	NA	17159045	17137521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17158456
transcript_93766.known	chr22	-	1799	8	FSM	ENSG00000069998.12	ENST00000336737.8	1799	8	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_7	195.592141238562	311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGAAGCTCTGTCTG	-17147914	True	NA	-10	True	AATAAA	-30	NA	17159277	17137519	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17138358_17138549_17138739_17141058_17141234_17143097_17143132_17145023_17145118_17148447_17148561_17149541_17149746_17159125
transcript_93778.nnic	chr22	+	304	2	FSM	ENSG00000185837.4	ENST00000689229.1	297	2	-9	2	-4	-2	multi-exon	FALSE	canonical	3	10	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCCTTGTCTCTTTTT	17159171	True	NA	8	True	AATAAA	-20	NA	17159347	17165445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17159475_17165268
transcript_93779.known	chr22	+	339	2	FSM	ENSG00000185837.4	ENST00000329743.4	379	2	32	8	27	-8	multi-exon	FALSE	canonical	2	12	junction_1	0	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCATATGTCCCTTGTCT	17159207	True	NA	2	True	AATAAA	-14	NA	17159383	17165439	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17159552_17165268
transcript_93780.known	chr22	+	616	2	FSM	ENSG00000185837.4	ENST00000431923.2	660	2	42	2	42	-2	multi-exon	FALSE	canonical	1	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TATGTCCCTTGTCTCTTTTT	17159222	True	NA	8	True	AATAAA	-20	NA	17159398	17165445	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17159838_17165268
transcript_93781.known	chr22	-	3195	7	FSM	ENSG00000093072.18	ENST00000330232.8	3195	7	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_6	6.52346193026031	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAGTGGCTGTCACTGTGTC	-17199750	False	NA	-4	True	AATAAA	-13	NA	17199783	17179305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17181577_17181819_17182023_17182603_17182762_17188338_17188448_17189941_17190033_17191682_17191811_17199548
transcript_93785.known	chr22	-	994	8	FSM	ENSG00000131100.13	ENST00000399798.6	994	8	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_7	147.116502494188	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGATGGTGGTTGCATGGGCT	-17622583	True	NA	42	True	NA	NA	NA	17628749	17592408	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17628602
transcript_93788.known	chr22	-	1333	9	FSM	ENSG00000131100.13	ENST00000253413.10	1333	9	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_1	30.5509308368829	2833	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAGGTTTTGACAGAGTCA	-17622583	True	NA	1	True	NA	NA	NA	17628749	17592135	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17601091_17601182_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_93789.known	chr22	-	1208	8	FSM	ENSG00000131100.13	ENST00000399796.6	1208	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_4	148.379271339582	589	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTAATGTGATTTCTAGTGT	-17622581	True	NA	31	True	ATTAAA	-14	NA	17628747	17592168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17592737_17594528_17594617_17598193_17598289_17600026_17600096_17612811_17612879_17613210_17613321_17619460_17619527_17628602
transcript_93799.known	chr22	+	2112	6	FSM	ENSG00000099968.18	ENST00000493680.5	2112	6	0	0	0	0	multi-exon	FALSE	canonical	3	188	junction_4	36.7532311504717	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATAAAAATATTTTTTGAGC	17634871	True	NA	-23	True	AATAAA	-24	NA	17638771	17703733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17638887_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
transcript_9380.nnic	chr1	-	965	3	NNC	ENSG00000275585.2	novel	553	3	NA	NA	-370	1517	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	5	58	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	NA	False	NA	NA	False	AATAAA	-16	NA	121052537	121028074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_121028292_121037561_121037798_121052025
transcript_93800.known	chr22	+	1381	7	FSM	ENSG00000099968.18	ENST00000399782.5	1381	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	107.274958245933	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTAGGTTTGTTGTTTTTCTT	17628811	True	NA	NA	False	ATTAAA	-21	NA	17628915	17702428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_17629006_17638101_17638701_17655661_17655833_17683213_17683322_17688985_17689143_17696140_17696211_17702242
transcript_93803.known	chr22	-	854	7	FSM	ENSG00000015475.19	ENST00000342111.9	854	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_4	204.118225545883	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATGTCAACAGCGTTCCT	-17774401	False	NA	NA	False	NA	NA	NA	17774412	17735498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17740081_17740177_17743802_17744014_17750104_17750175_17774380
transcript_93809.known	chr22	-	2177	6	FSM	ENSG00000015475.19	ENST00000622694.5	2177	6	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_5	70.4630399571293	710	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17770882	True	NA	-6	True	AATAAA	-18	NA	17774469	17734137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774380
transcript_93810.known	chr22	-	700	6	FSM	ENSG00000015475.19	ENST00000551952.5	700	6	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	180.504404378397	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAGCTCGATGTGGTCACAG	-17774654	False	NA	NA	False	NA	NA	NA	17774665	17735551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17774639
transcript_93812.known	chr22	-	907	5	FSM	ENSG00000015475.19	ENST00000399767.6	907	5	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_4	174.52363736755	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTGAATGGCCTTCATAT	-17770908	True	NA	-25	True	AATATA	-27	NA	17774495	17735363	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17774380
transcript_93813.known	chr22	-	1988	5	FSM	ENSG00000015475.19	ENST00000614949.4	1988	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	195.501118922629	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACGACTTTTCATGTTTTGGA	-17770908	True	NA	-10	True	AATAAA	-14	NA	17774495	17734141	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17750104_17750175_17774380
transcript_93817.known	chr22	-	1879	4	FSM	ENSG00000015475.19	ENST00000399765.5	1879	4	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_3	196.832133781273	356	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGCCACTGTTTGGAAATAAA	-17770902	True	NA	-43	True	AAAAAG	-23	NA	17774489	17734174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17774380
transcript_93819.known	chr22	-	2495	6	FSM	ENSG00000015475.19	ENST00000317361.11	2495	6	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	170.168622254516	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTTCATGTTTTGGAGTGG	-17774005	False	3587	-6	True	AATAAA	-18	NA	17774016	17734137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17735592_17738016_17738230_17739348_17739489_17743802_17744014_17750104_17750175_17773609
transcript_9382.known	chr1	+	1261	2	FSM	ENSG00000226067.7	ENST00000659101.1	1261	2	0	0	0	0	multi-exon	FALSE	canonical	3	84	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120913196	False	NA	NA	False	AATAAA	-28	NA	120913211	120953460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_120913451_120952438
transcript_93823.known	chr22	-	5113	19	FSM	ENSG00000243156.9	ENST00000495076.5	5113	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	5.07505397404857	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	65	TGCATCTTAAAAAAAAAAAA	-17999237	True	NA	NA	False	NA	NA	NA	18001501	17839591	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_17842018_17864898_17864987_17865923_17866013_17871836_17872024_17885877_17886052_17887169_17887233_17887322_17887436_17889033_17889231_17891484_17891633_17893807_17893905_17895283_17895411_17896245_17896362_17896723_17896982_17900841_17900998_17901877_17901980_17902630_17902748_17904631_17904840_17906548_17906887_18001392
transcript_93825.known	chr22	+	2003	5	FSM	ENSG00000183785.16	ENST00000330423.8	2003	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	1.6393596310755	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTGGTGTCAAGTGAGAGAA	18110727	True	NA	NA	False	AATAAA	-19	NA	18110808	18131732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18110869_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_93826.known	chr22	-	805	2	FSM	ENSG00000225335.3	ENST00000426483.1	805	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGAGCCTCGGTTTGACT	-18077765	False	NA	NA	False	AATACA	-13	NA	18077797	18076526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_18077063_18077528
transcript_93828.known	chr22	+	1518	5	FSM	ENSG00000183785.16	ENST00000316027.10	1518	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.34477204006491	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTGTCTCTTTATTTATG	18110605	True	NA	16	True	AATATA	-14	NA	18110686	18131154	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18110840_18121478_18121702_18124155_18124305_18126353_18127035_18130842
transcript_93829.known	chr22	+	1858	11	FSM	ENSG00000184979.10	ENST00000215794.8	1858	11	0	0	0	0	multi-exon	FALSE	canonical	2	21	junction_1	16.0872620417522	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18150150	False	NA	NA	False	AATAAA	-17	NA	18150169	18177397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18150223_18157557_18157821_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_93830.nnic	chr22	+	2086	11	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	-189	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_2	20.9353767580142	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18149367	True	NA	NA	False	AATAAA	-17	NA	18149980	18177397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18150223_18157557_18157860_18160171_18160269_18161789_18161936_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_93833.nnic	chr22	+	1597	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	14453	0	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_1	20.1271468622934	82	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	NA	False	NA	NA	False	AATAAA	-17	NA	18164622	18177397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18164921_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_93834.nnic	chr22	+	1360	8	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	15390	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	21.684189669726	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18165537	False	NA	NA	False	AATAAA	-17	NA	18165559	18177397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18165621_18167254_18167335_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_93837.nnic	chr22	+	1472	7	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	14498	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	24.4432449200637	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	NA	False	NA	NA	False	AATAAA	-17	NA	18164667	18177397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18164921_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_93838.nnic	chr22	+	1279	7	NNC	ENSG00000184979.10	novel	1858	11	NA	NA	15391	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	24.7857485933617	58	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACTTTGCAGTTTTAACGG	18165494	True	NA	NA	False	AATAAA	-17	NA	18165560	18177397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18165621_18167889_18168037_18169843_18169940_18170752_18170921_18173149_18173282_18173792_18173843_18176771
transcript_9384.nnic	chr1	+	394	2	NNC	ENSG00000226067.7	novel	692	3	NA	NA	39090	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	50	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	120952359	True	NA	NA	False	AATAAA	-28	NA	120952417	120953460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_120952574_120953222
transcript_93842.nic	chr22	+	686	5	ISM	ENSG00000278558.5	ENST00000612978.5	1334	9	1562	0	-45	0	3prime_fragment	FALSE	canonical	3	28	junction_3	18.5674446276271	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	18529363	18530573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_18529498_18529605_18529725_18529935_18530009_18530155_18530197_18530254
transcript_93843.known	chr22	+	463	5	FSM	ENSG00000278558.5	ENST00000620199.4	463	5	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	21.1364613878483	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCACCTGCCCGCCT	NA	False	NA	NA	False	NA	NA	NA	18528946	18530222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18529094_18529440_18529498_18529605_18529725_18529935_18530009_18530155
transcript_93844.known	chr22	+	788	4	FSM	ENSG00000278558.5	ENST00000618859.1	788	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	19.1369334592098	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	NA	False	NA	NA	False	AATAAA	-14	NA	18529408	18530573	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18529498_18529605_18529725_18529935_18530197_18530254
transcript_93845.known	chr22	-	2425	3	FSM	ENSG00000274602.5	ENST00000610959.4	2425	3	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_2	56.5	51	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTTTGTGTCAA	NA	False	NA	NA	False	AATAAA	-26	NA	18537791	18533645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_18534054_18535244_18535329_18535858
transcript_93846.known	chr22	+	3245	5	FSM	ENSG00000183628.14	ENST00000483718.5	3245	5	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	53.0913128487138	141	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTATCTTTTTCCTTTAAC	18905734	True	NA	NA	False	ATTAAA	-18	NA	18906324	18914238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906468_18906564_18906726_18910171_18910273_18910887_18911029_18911539
transcript_93851.nnic	chr22	+	1329	4	NNC	ENSG00000284294.1	novel	1214	2	NA	NA	-533	16	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_3	4.89897948556636	90	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	18938900	False	NA	16	True	NA	NA	NA	18938912	18947757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939003_18939672_18939750_18945105_18945301_18946790
transcript_93852.nnic	chr22	+	1118	3	NNC	ENSG00000284294.1	novel	1214	2	NA	NA	-533	0	at_least_one_novel_splicesite	FALSE	canonical	3	28	junction_1	4	38	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	18938900	False	NA	0	True	NA	NA	NA	18938912	18947741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939003_18939672_18939750_18946790
transcript_93853.nnic	chr22	+	1386	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	-20	16	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_1	9.5	116	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	18939413	False	NA	16	True	NA	NA	NA	18939425	18947757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939750_18945071_18945167_18946790
transcript_93855.nnic	chr22	+	1330	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	2	16	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	13	120	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	18939435	False	NA	16	True	NA	NA	NA	18939447	18947757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939750_18945105_18945167_18946790
transcript_93856.nnic	chr22	+	1464	3	NNC	ENSG00000284294.1	novel	1382	4	NA	NA	2	16	at_least_one_novel_splicesite	FALSE	canonical	2	16	junction_2	3	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TACTTTGTCTCTGTGTCTTT	18939435	False	NA	16	True	NA	NA	NA	18939447	18947757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_18939750_18945105_18945301_18946790
transcript_93858.known	chr22	+	1837	2	FSM	ENSG00000183628.14	ENST00000608842.1	1837	2	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTACTGGGTCGTGCTGTA	18905762	True	NA	NA	False	NA	NA	NA	18906352	18908269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906485_18906564
transcript_9386.known	chr1	+	7091	10	FSM	ENSG00000171943.12	ENST00000367123.8	7091	10	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_6	64.9888879390589	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CAAAGAACAGAAATTGTATA	121181374	True	NA	NA	False	AATAAA	-21	NA	121184974	121392874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_121185125_121186904_121187514_121284802_121284996_121324477_121324641_121365292_121365356_121373970_121374187_121374825_121374955_121382700_121382926_121386505_121386608_121387633
transcript_93860.nic	chr22	+	1236	2	ISM	ENSG00000284294.1	ENST00000640084.1	1382	4	3054	0	19	0	3prime_fragment	FALSE	canonical	3	36	junction_1	0	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTATTTCTTTCTCTATACT	18939452	False	NA	0	True	NA	NA	NA	18939464	18947741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_18939750_18946790
transcript_93861.known	chr22	+	1435	5	FSM	ENSG00000183628.14	ENST00000480608.5	1435	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.4596094566727	379	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGTGGCTTGTGTGATAGCT	18905764	True	NA	NA	False	AATAAA	-21	NA	18906354	18912087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906485_18906564_18907087_18910178_18910273_18910887_18911029_18911539
transcript_93862.known	chr22	+	1199	6	FSM	ENSG00000183628.14	ENST00000427407.5	1199	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	59.5012604908501	339	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCGCATGTGGCTTGTGTGA	18905760	True	NA	NA	False	AATAAA	-16	NA	18906350	18912082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18906485_18906564_18906726_18909979_18910099_18910171_18910273_18910887_18911029_18911539
transcript_93863.known	chr22	+	1214	2	FSM	ENSG00000284294.1	ENST00000638287.1	1214	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGAGGCTGGCGGGATCCTCC	18939433	False	NA	6	True	AATAAA	-15	NA	18939445	18947692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_18939758_18946790
transcript_93864.known	chr22	-	2034	14	FSM	ENSG00000100033.17	ENST00000420436.5	2034	14	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	158.635714581643	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGAGAGCCCTTTGCCCTC	-18936272	True	NA	NA	False	AATAAA	-15	NA	18936296	18912780	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_18913363_18913437_18913527_18916889_18916989_18918315_18918492_18919450_18919598_18919705_18919799_18921341_18921424_18922324_18922405_18922816_18922934_18923114_18923180_18925050_18925201_18925687_18925723_18930989_18931182_18936169
transcript_93866.known	chr22	-	4438	10	FSM	ENSG00000070413.20	ENST00000263196.12	4438	10	0	0	0	0	multi-exon	TRUE	non_canonical	0	0	junction_7	154.24511517567	75	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGGCATGGTTAGTCCTTGG	-19119053	True	NA	-6	True	AATAAA	-15	NA	19122412	19036285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19039122_19041057_19041295_19041806_19041960_19048439_19048644_19056985_19057163_19063201_19063279_19064847_19065068_19068099_19068226_19089367_19089491_19122127
transcript_93870.known	chr22	-	2101	10	FSM	ENSG00000100056.12	ENST00000472073.1	2101	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_9	43.0153575790591	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACTGTCATTAAAGAACA	-19141719	True	NA	-35	True	NA	NA	NA	19144633	19133967	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144056
transcript_93872.known	chr22	-	5359	10	FSM	ENSG00000100056.12	ENST00000252137.11	5359	10	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	12.1655250605964	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTGTCTGCTTCTCGTTAT	-19141737	True	NA	-3	True	GATAAA	-16	NA	19144651	19130278	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138214_19138318_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_93873.known	chr22	-	1808	10	FSM	ENSG00000100056.12	ENST00000434568.5	1808	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	56.5744347445617	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGGGGGTTGCCTCTCCA	-19141770	True	NA	-4	True	ATTAAA	-17	NA	19144684	19133936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19134476_19135059_19135176_19137322_19137433_19138302_19138480_19139158_19139293_19139611_19139730_19139854_19140025_19142537_19142634_19142725_19142895_19144505
transcript_93878.nnic	chr22	+	989	2	Genic_Genomic	ENSG00000260924.2	novel	1445	1	NA	NA	276	-7	multi-exon	FALSE	canonical	3	4	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTTGCATCCTCGACCAAG	19171232	True	NA	21	True	AATAAA	-18	NA	19171670	19172832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr22_+_19171852_19172024
transcript_93879.known	chr22	+	1445	1	FSM	ENSG00000260924.2	ENST00000565162.2	1445	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	73	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCTCGACCAAGATAGTGT	NA	False	NA	28	True	AATAAA	-25	NA	19171394	19172839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19171400_19172800
transcript_93880.known	chr22	-	1548	9	FSM	ENSG00000100075.10	ENST00000215882.10	1548	9	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_8	187.358238076152	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTCCTGTCCTGTGTTCGT	-19167078	True	NA	-8	True	AATAAA	-16	NA	19178736	19175580	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178579
transcript_93885.known	chr22	-	1514	9	FSM	ENSG00000100075.10	ENST00000451283.5	1514	9	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_8	744.236930940006	280	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATCCTGTTGCAGCCTCCTG	-19178502	False	NA	-20	True	AATAAA	-4	NA	19178521	19175592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19176245_19176420_19176495_19176577_19176694_19176845_19176951_19177119_19177205_19177726_19177866_19177941_19178042_19178132_19178241_19178386
transcript_93887.known	chr22	-	5518	33	FSM	ENSG00000070371.16	ENST00000427926.6	5518	33	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_24	11.466621055808	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GGTGCTCTGCTTGGTGCTGG	-19290996	True	NA	-1	True	ATTAAA	-20	NA	19291719	19179472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19179970_19180198_19180239_19180730_19180807_19183389_19183612_19187557_19187729_19187980_19188092_19191303_19191436_19196265_19196416_19196488_19196657_19199733_19199842_19201328_19201494_19208153_19208312_19208921_19209115_19210325_19210510_19216110_19216257_19219884_19220008_19221376_19221612_19221950_19222094_19222683_19222810_19223890_19224055_19225452_19225634_19226218_19226384_19229837_19229976_19232475_19232599_19233165_19233319_19233421_19233623_19234508_19234707_19235695_19235870_19239274_19239389_19242774_19242937_19253958_19254228_19275622_19275831_19291599
transcript_93890.known	chr22	+	954	4	FSM	ENSG00000185608.9	ENST00000443660.5	954	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	179.755389348971	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATCAAAATGCTCCTTTGTC	19429363	True	NA	23	True	AATAAA	-10	NA	19432578	19436067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19432860_19433264_19433349_19434735_19434895_19435637
transcript_93898.known	chr22	-	1005	3	FSM	ENSG00000242259.9	ENST00000399568.5	1005	3	0	0	0	0	multi-exon	FALSE	canonical	3	492	junction_2	14.5	1309	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441374	True	NA	NA	False	AATAAA	-15	NA	19447692	19440885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19441695_19447377_19447546_19447664
transcript_9390.known	chr1	-	748	5	FSM	ENSG00000188610.12	ENST00000452190.2	748	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_4	137.729807957464	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTATGATATATATGATATAC	NA	False	NA	NA	False	GATAAA	-6	NA	121184292	121168734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337_121183470_121183980
transcript_93901.known	chr22	-	3720	3	FSM	ENSG00000242259.9	ENST00000399562.9	3720	3	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	167	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCGGCCATGACCTACCA	-19441393	True	NA	NA	False	AATAAA	-15	NA	19447711	19440885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19444391_19447377_19447546_19447664
transcript_93905.known	chr22	+	744	4	FSM	ENSG00000185608.9	ENST00000333130.4	744	4	0	0	0	0	multi-exon	FALSE	canonical	3	344	junction_1	20.237478982214	2949	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTCCTTTGTCTTGTGTTA	19429329	True	NA	31	True	AATAAA	-18	NA	19432544	19436075	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19432608_19433264_19433349_19434735_19434895_19435637
transcript_93916.nic	chr22	-	928	10	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-4	0	combination_of_known_junctions	FALSE	canonical	3	49	junction_9	322.149187125208	370	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466205	True	NA	-5	True	AATAAA	-17	NA	19479206	19450620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19479082
transcript_93921.nic	chr22	-	815	9	NIC	ENSG00000070010.19	novel	1791	12	NA	NA	-13	0	combination_of_known_junctions	FALSE	canonical	3	61	junction_8	337.789042895118	685	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466214	True	NA	-5	True	AATAAA	-17	NA	19479215	19450620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
transcript_93930.known	chr22	-	1791	12	FSM	ENSG00000070010.19	ENST00000263202.15	1791	12	0	0	0	0	multi-exon	FALSE	canonical	3	841	junction_10	103.828370778475	2453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCTGGCCTGTATTTTTTAT	-19466192	True	NA	-18	True	ATTAAA	-14	NA	19479193	19449910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19450745_19454748_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_93931.known	chr22	-	5038	11	FSM	ENSG00000070010.19	ENST00000459854.5	5038	11	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_9	285.9031479365	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466171	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475495_19475603_19479082
transcript_93932.known	chr22	-	1007	12	FSM	ENSG00000070010.19	ENST00000399523.5	1007	12	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_1	276.077004469214	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGGCTTTTAGTTACTGG	-19466171	True	NA	-5	True	AATAAA	-17	NA	19479172	19450620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19450745_19454801_19454831_19455679_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19471686_19471809_19475067_19475101_19475469_19475603_19479082
transcript_93933.known	chr22	-	596	7	FSM	ENSG00000070010.19	ENST00000447868.5	596	7	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_6	382.473383242401	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGGTCTGTCCTGGCTCTC	-19466201	True	NA	NA	False	ATTAAA	-3	NA	19479202	19455679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19455769_19456586_19456635_19456852_19456919_19458070_19458140_19465201_19465275_19467872_19468004_19479082
transcript_93934.known	chr22	-	293	3	FSM	ENSG00000070010.19	ENST00000474226.1	293	3	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	441	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACATCACCAACCCCAAAGCC	-19466143	True	NA	NA	False	NA	NA	NA	19479144	19467894	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19468004_19471686_19471809_19479082
transcript_93935.known	chr22	+	1879	19	FSM	ENSG00000093009.11	ENST00000263201.7	1879	19	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_12	18.4176512222164	257	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCATTGTGGCTCTGGTCTC	19474885	True	NA	21	True	AATAAA	-22	NA	19479919	19520608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19482689_19482828_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_93936.known	chr22	+	1693	18	FSM	ENSG00000093009.11	ENST00000404724.7	1693	18	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_3	45.838893444859	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTAAATAAAATGCTTATTTT	19474903	True	NA	-9	True	NA	NA	NA	19479937	19520578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19514748_19514888_19514964_19515049_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_93937.known	chr22	+	1519	16	FSM	ENSG00000093009.11	ENST00000672837.1	1519	16	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_12	67.2177225307599	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCCCATTGTGGCTCTGGT	19474881	True	NA	18	True	AATAAA	-19	NA	19479915	19520605	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19480020_19480157_19480218_19480952_19481046_19483861_19484006_19494326_19494383_19495980_19496030_19497385_19497448_19499100_19499152_19505361_19505482_19507385_19507518_19507765_19507865_19508529_19508692_19516526_19516646_19516816_19516894_19518843_19518910_19520480
transcript_93938.known	chr22	+	2031	12	FSM	ENSG00000184702.20	ENST00000455784.7	2031	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	42.4774125684745	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCAGCGGGTGTCCGAGTGCT	19713981	True	NA	11	True	NA	NA	NA	19714502	19723319	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19714632_19714780_19714792_19719601_19719699_19719805_19719893_19720114_19720239_19720319_19720455_19720548_19720667_19720767_19720870_19721639_19721737_19721821_19721958_19722236_19722340_19722427
transcript_93941.nic	chr22	-	1613	8	NIC	ENSG00000185838.14	novel	1699	7	NA	NA	-3	0	combination_of_known_splicesites	TRUE	canonical	3	48	junction_7	48.5588218933848	129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851264	True	NA	-9	True	AATAAA	-14	NA	19854877	19788414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854659
transcript_93950.known	chr22	-	1197	6	FSM	ENSG00000185838.14	ENST00000460402.5	1197	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_5	76.9051363694259	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTGCCAGCTGAG	-19851193	True	NA	-58	True	NA	NA	NA	19854806	19788463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19854442_19854540_19854681
transcript_93959.known	chr22	-	6653	3	FSM	ENSG00000215012.9	ENST00000328554.9	6653	3	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	9	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-19851261	True	NA	-7	True	AATAAA	-16	NA	19854874	19846145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19852487_19854442_19854540_19854659
transcript_93961.nnic	chr22	+	696	2	Intergenic	novelGene_37	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGCCTCCTTGAAGTGGGAAT	19854754	True	NA	NA	False	AATAAA	-21	NA	19854947	19856137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr22_+_19855108_19855601
transcript_93963.known	chr22	-	1699	7	FSM	ENSG00000185838.14	ENST00000403325.5	1699	7	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_5	32.4602320796797	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGCAGGCTTGAGGTGGGA	-19851230	True	NA	-9	True	AATAAA	-14	NA	19854843	19788414	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788961_19802000_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442
transcript_93964.known	chr22	-	1076	8	FSM	ENSG00000185838.14	ENST00000405009.5	1076	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	59.294491604987	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAGTTGCAGGCTTGAGGTG	NA	False	NA	-12	True	AATAAA	-11	NA	19854939	19788417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19788627_19802102_19802217_19806658_19806758_19812284_19812448_19820597_19820724_19821227_19821376_19854442_19854540_19854819
transcript_93965.known	chr22	-	1385	3	FSM	ENSG00000215012.9	ENST00000484072.5	1385	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	90	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCACTGAGTTTGGGGCTTG	-19851250	True	NA	-7	True	AATAAA	-16	NA	19854863	19846145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19847390_19854442_19854540_19854819
transcript_93967.known	chr22	-	1941	18	FSM	ENSG00000184470.21	ENST00000400521.7	1941	18	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_13	29.1125961156877	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19941251	True	NA	-5	True	AATAAA	-19	NA	19941818	19875521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19883324_19883462_19895406_19895582_19898038_19898131_19899048_19899069_19911376_19911448_19915213_19915277_19915764_19915844_19918142_19918218_19918859_19919005_19919542_19919600_19931029_19931099_19941700
transcript_93973.known	chr22	-	810	8	FSM	ENSG00000184470.21	ENST00000462843.2	810	8	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_7	54.2394539735324	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGGGACTGTCCACCTCACCC	-19881079	False	NA	NA	False	NA	NA	NA	19881154	19875691	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877108_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19880855_19880946_19881035
transcript_93975.known	chr22	+	2405	7	FSM	ENSG00000093010.15	ENST00000678868.1	2405	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	137.531107592266	522	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATTTTGGCTTATTTTTAA	19940482	True	NA	NA	False	TTTAAA	-36	NA	19941802	19969955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941898_19947306_19947491_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_93978.known	chr22	-	850	7	FSM	ENSG00000184470.21	ENST00000485358.5	850	7	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	44.0025251800646	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCCCAGGCTCCTGGTGC	-19881089	False	NA	NA	False	NA	NA	NA	19881164	19875640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881035
transcript_93982.known	chr22	+	1405	6	FSM	ENSG00000093010.15	ENST00000676678.1	1405	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.681622619549	990	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	NA	False	NA	25	True	TATAAA	-34	NA	19941370	19969029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941576_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_93983.known	chr22	+	1548	6	FSM	ENSG00000093010.15	ENST00000403710.5	1548	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	125.811605188075	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCTTATATACTAATATC	19940452	True	NA	19	True	NA	NA	NA	19941772	19968958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941898_19961198_19961290_19962232_19962816_19963565_19963760_19964167_19964300_19968535
transcript_93985.known	chr22	+	2272	6	FSM	ENSG00000093010.15	ENST00000361682.11	2272	6	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	97.3118697795906	718	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTTTTTCTCAGTGTTTTT	19940451	True	NA	NA	False	NA	NA	NA	19941771	19969975	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19941898_19961198_19961290_19962526_19962816_19963565_19963760_19964167_19964300_19968535
transcript_93989.known	chr22	+	909	4	FSM	ENSG00000093010.15	ENST00000677675.1	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	144.907633415988	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCGACTTAGTACATCCTTC	19963113	True	NA	25	True	TATAAA	-34	NA	19963137	19969029	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_19963227_19963565_19963760_19964167_19964300_19968535
transcript_93991.known	chr22	-	1129	7	FSM	ENSG00000184470.21	ENST00000462330.5	1129	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_6	23.2999761564017	300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGCTCTGCCTGCGGTGT	-19881294	False	NA	-5	True	AATAAA	-19	NA	19881369	19875521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_19875808_19877039_19877235_19878089_19878188_19878365_19878438_19880178_19880272_19880621_19880718_19881080
transcript_93995.known	chr22	+	2241	8	FSM	ENSG00000183597.16	ENST00000399807.7	2241	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_4	21.3570234110372	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCATAGGAATCTGTACCTGA	20020178	True	NA	-52	True	NA	NA	NA	20021088	20065862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20021135_20036759_20037095_20043354_20043444_20052464_20052585_20055942_20056014_20061529_20061684_20063337_20063443_20064541
transcript_940.nic	chr1	+	1235	7	NIC	ENSG00000169972.12	novel	1257	8	NA	NA	-36	0	combination_of_known_junctions	FALSE	canonical	3	65	junction_1	129.270710784256	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCAGTTTGTTTCTTCAGC	1304204	True	NA	17	True	AATAAA	-17	NA	1308560	1311677	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_1308721_1309085_1309274_1309453_1309604_1309680_1309852_1310633_1310689_1310908_1311072_1311329
transcript_94000.nnic	chr22	+	618	6	NNC	ENSG00000183597.16	novel	568	6	NA	NA	1	2062	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_5	30.9283041888817	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAGTTTAGGGGACTGACT	20020159	True	NA	5	True	TATAAA	-16	NA	20021069	20058303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20055942_20056014_20058125
transcript_94002.known	chr22	+	1859	6	FSM	ENSG00000183597.16	ENST00000420290.6	1859	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_4	30.3275452353137	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTCGAGGCCTTTCCCTTG	20020158	True	NA	11	True	AATAAA	-23	NA	20021068	20065925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20021135_20036759_20036855_20043354_20043444_20052464_20052585_20063337_20063443_20064541
transcript_94006.known	chr22	+	4506	14	FSM	ENSG00000128191.16	ENST00000351989.8	4506	14	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	21.5150972176289	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGAATGGCTGATGTCTTTA	20077827	True	NA	11	True	CATAAA	-16	NA	20080240	20111872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20080384_20085686_20086684_20087161_20087322_20089668_20089812_20089975_20090259_20091434_20091633_20091868_20091971_20092808_20092908_20094712_20094796_20106176_20106278_20106591_20106699_20107270_20107399_20108889_20109004_20110024
transcript_94007.known	chr22	-	2886	12	FSM	ENSG00000099899.15	ENST00000252136.12	2886	12	0	0	0	0	multi-exon	TRUE	canonical	3	169	junction_9	22.5406886458267	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCTGGACAGTTTGCTTT	-20115030	True	NA	-10	True	AATAAA	-15	NA	20117226	20111874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113508_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_94008.known	chr22	-	2473	12	FSM	ENSG00000099899.15	ENST00000439169.2	2473	12	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_4	62.4899330735535	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGTGAGGGCCAGAATA	-20115026	True	NA	NA	False	NA	NA	NA	20117222	20112337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20112795_20112910_20113008_20113117_20113235_20113431_20113562_20113685_20113809_20114573_20114686_20114760_20114877_20114964_20115080_20115265_20115448_20115671_20115781_20116037_20116613_20116882
transcript_9401.known	chr1	-	2396	4	FSM	ENSG00000188610.12	ENST00000369390.7	2396	4	0	0	0	0	multi-exon	FALSE	canonical	3	218	junction_1	74.1994309651735	268	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATATAAGGCTAATGTTTA	NA	False	NA	NA	False	AATAAA	-17	NA	121184340	121167645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183337
transcript_94014.known	chr22	+	1132	6	FSM	ENSG00000099901.17	ENST00000402752.5	1132	6	0	0	0	0	multi-exon	FALSE	canonical	3	3233	junction_5	1771.17741629685	258	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116974	True	NA	18	True	AATAAA	-21	NA	20117423	20127355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_94019.known	chr22	+	1221	6	FSM	ENSG00000099901.17	ENST00000430524.6	1221	6	0	0	0	0	multi-exon	FALSE	canonical	1	86	junction_1	2968.8534217775	279	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGATGGCAGGACTGTGTG	20116091	False	NA	18	True	AATAAA	-21	NA	20116103	20127355	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20116431_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_9402.known	chr1	-	1773	4	FSM	ENSG00000188610.12	ENST00000355228.8	1773	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	110.665662646048	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	-121183855	False	NA	NA	False	AATAAA	-18	NA	121183911	121167719	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121177207_121177333_121181270_121181349_121183457
transcript_94032.known	chr22	+	837	6	FSM	ENSG00000099901.17	ENST00000331821.7	837	6	0	0	0	0	multi-exon	FALSE	canonical	3	3733	junction_5	1588.07727771667	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	20040276	True	NA	21	True	TATAAA	-12	NA	20117547	20127181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20117665_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_94040.nic	chr22	+	893	6	NIC	ENSG00000099901.17	novel	333	3	NA	NA	-42	0	combination_of_known_junctions	FALSE	canonical	3	187	junction_1	2934.42848950183	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACATTCAGGTTGTTTTTTT	20117536	True	NA	21	True	TATAAA	-12	NA	20117739	20127181	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_20117913_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126951
transcript_94045.known	chr22	+	932	6	FSM	ENSG00000099901.17	ENST00000418705.2	932	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3051.39027985605	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGAGGAGAAGCAATAAATC	20117935	False	NA	-8	True	NA	NA	NA	20117952	20127035	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20118314_20119012_20119150_20122263_20122422_20125307_20125437_20126302_20126369_20126954
transcript_94053.known	chr22	-	943	4	FSM	ENSG00000099899.15	ENST00000464535.1	943	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_3	57.2266449207787	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACCCTTCCTGTTGATCTC	-20115007	True	NA	NA	False	NA	NA	NA	20117203	20115609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20115781_20116037_20116613_20116882_20116973_20117096
transcript_94060.known	chr22	-	1172	5	FSM	ENSG00000128185.10	ENST00000248879.8	1172	5	0	0	0	0	multi-exon	FALSE	canonical	3	644	junction_2	60.1227910197123	3641	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGGCCCTGGTAGGGCCCCCA	-20309632	True	NA	NA	False	NA	NA	NA	20320060	20314237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20314825_20315335_20315477_20316118_20316220_20319638_20319800_20319878
transcript_94064.known	chr22	-	935	4	FSM	ENSG00000128185.10	ENST00000443409.1	935	4	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	325.111604769125	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAGCGCTTGTTCTGGTCTCA	-20309652	True	NA	NA	False	NA	NA	NA	20320080	20314393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20314825_20315335_20315477_20319638_20319800_20319878
transcript_94081.known	chr22	+	3900	5	FSM	ENSG00000185252.19	ENST00000400451.7	3900	5	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_1	47.9374592568275	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACATTACCCTCTGCTTTGT	20389630	True	NA	30	True	AATAAA	-41	NA	20394150	20408455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20394663_20395332_20395419_20400631_20400759_20401276_20401373_20405376
transcript_94083.known	chr22	+	2789	4	FSM	ENSG00000185252.19	ENST00000403682.7	2789	4	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_1	73.1087470066947	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAGCCAGATGTGGCGGCAT	20389607	True	NA	NA	False	NA	NA	NA	20394127	20407407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20394663_20400631_20400759_20401276_20401373_20405376
transcript_94084.known	chr22	-	2528	7	FSM	ENSG00000099910.17	ENST00000328879.9	2528	7	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_6	9.24962461700774	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTGTAGCCACAGCCTCA	-20494984	True	NA	-7	True	AATAAA	-27	NA	20495795	20441518	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20442439_20446442_20446677_20457807_20458001_20464857_20465577_20471349_20471516_20488984_20489245_20495759
transcript_94087.known	chr22	+	3351	18	FSM	ENSG00000099917.17	ENST00000263205.11	3351	18	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_9	74.4707740913953	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCAGTTGTTCATCACTGT	20500614	True	NA	12	True	AATAAA	-18	NA	20507609	20587619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20575112_20575233_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_94088.known	chr22	+	3252	17	FSM	ENSG00000099917.17	ENST00000292733.11	3252	17	0	0	0	0	multi-exon	FALSE	canonical	3	219	junction_8	29.1780632496401	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTGTGTCCCCTTCTCCA	20500606	True	NA	25	True	AATAAA	-31	NA	20507601	20587632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20507747_20537116_20537205_20551435_20551488_20553144_20553175_20554935_20555149_20564449_20564689_20566466_20566818_20568520_20568632_20582610_20582748_20582839_20582968_20583112_20583248_20583329_20583394_20584358_20584426_20584854_20585016_20585100_20585268_20585727_20585827_20586567
transcript_9409.known	chr1	-	1659	3	FSM	ENSG00000188610.12	ENST00000619376.4	1659	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	196.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	NA	False	NA	NA	False	NA	NA	NA	121184314	121168231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_121168836_121181270_121181349_121183337
transcript_94092.nnic	chr22	+	766	3	NNC	ENSG00000099917.17	novel	590	6	NA	NA	0	-35927	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	1.5	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTTGGGAAACTTGCAAT	20495435	True	NA	NA	False	GATAAA	-17	NA	20495912	20501256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_20496037_20499240_20499367_20500740
transcript_94101.known	chr22	+	926	7	FSM	ENSG00000226287.9	ENST00000436618.5	926	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	43.7432534480715	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCTGTCGCTGCTCTGGAC	NA	False	NA	NA	False	NA	NA	NA	20702311	20704340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20702461_20702585_20702710_20703005_20703123_20703467_20703525_20703632_20704041_20704187_20704229_20704310
transcript_94103.known	chr22	+	671	7	FSM	ENSG00000226287.9	ENST00000445836.5	671	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	42.3503902645012	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGGCTCCAGGTGGACTCC	20702485	True	NA	-94	True	NA	NA	NA	20702840	20704505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20702894_20703005_20703123_20703467_20703525_20703632_20703752_20703967_20704057_20704187_20704229_20704310
transcript_94111.known	chr22	+	788	6	FSM	ENSG00000226287.9	ENST00000452055.5	788	6	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	18.7552659272003	610	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20702565	True	NA	7	True	AATAAA	-17	NA	20702920	20704606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_94117.nic	chr22	+	744	5	ISM	ENSG00000226287.9	ENST00000452055.5	788	6	389	0	215	0	3prime_fragment	FALSE	canonical	3	74	junction_2	14.6714007511212	520	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	20702954	False	NA	7	True	AATAAA	-17	NA	20703309	20704606	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_20703525_20703632_20703752_20703967_20704041_20704187_20704229_20704310
transcript_94123.known	chr22	+	466	5	FSM	ENSG00000226287.9	ENST00000414022.5	466	5	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	17.2988438920062	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCCCCCACGTGCCCGCCC	20702617	True	NA	NA	False	NA	NA	NA	20702972	20704254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20703123_20703467_20703525_20703632_20703752_20703967_20704041_20704187
transcript_94124.known	chr22	-	3925	10	FSM	ENSG00000241973.11	ENST00000492581.5	3925	10	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_9	43.6902678656568	48	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTGTGAGGTTTTGTGTC	-20721915	False	NA	-1	True	AATAAA	-24	NA	20722009	20707692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_20708099_20709295_20709380_20709907_20711462_20712485_20712612_20712692_20713391_20714457_20714529_20714627_20714701_20717707_20717779_20718692_20718823_20721297
transcript_94127.known	chr22	+	4259	5	FSM	ENSG00000099940.12	ENST00000215730.12	4259	5	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	12.3768937944866	286	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTCTTTAACCTCTTTTT	20855579	True	NA	8	True	AATAAA	-19	NA	20859006	20891214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20859348_20870336_20870534_20881048_20881135_20883470_20883570_20887678
transcript_94131.known	chr22	+	972	2	FSM	ENSG00000099940.12	ENST00000490458.1	972	2	0	0	0	0	multi-exon	FALSE	canonical	3	209	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCATGAGGCCTGGAGATC	20855653	True	NA	NA	False	NA	NA	NA	20859080	20871041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20859348_20870336
transcript_94133.known	chr22	+	684	2	FSM	ENSG00000237476.1	ENST00000444039.1	684	2	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_1	0	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACCCTGGTATGTGTGGAG	20957077	False	NA	NA	False	AATAAA	-15	NA	20957091	20964679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20957487_20964390
transcript_94134.nic	chr22	+	737	3	ISM	ENSG00000183773.16	ENST00000483107.5	1325	11	3744	0	2563	0	3prime_fragment	FALSE	canonical	3	9	junction_1	0.5	147	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATGACTCCCAGTG	NA	False	NA	2	True	ATTAAA	-16	NA	20979435	20981356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_20979703_20980019_20980125_20980991
transcript_94135.nnic	chr22	+	556	3	NNC	ENSG00000183773.16	novel	1325	11	NA	NA	2723	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATCTGTATGACTCCCAGTG	20979511	True	NA	2	True	ATTAAA	-16	NA	20979595	20981356	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_20979682_20980019_20980125_20980991
transcript_94137.known	chr22	+	1660	3	FSM	ENSG00000099949.21	ENST00000493460.2	1660	3	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	3.5	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGCGGATCACCTGAGGT	20979076	True	NA	NA	False	NA	NA	NA	20982296	20987162	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_20982572_20983026_20983090_20985840
transcript_94138.known	chr22	-	1144	5	FSM	ENSG00000184436.12	ENST00000399133.2	1144	5	0	0	0	0	multi-exon	FALSE	canonical	3	110	junction_4	61.5832769508087	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGGAGGGCCTGCTGTCTGGC	NA	False	NA	-31	True	AATAAA	-13	NA	21002196	20999776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831_21001912_21002085
transcript_94141.nnic	chr22	-	1220	4	NNC	ENSG00000184436.12	novel	1913	4	NA	NA	-13	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	116.000957850451	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-21000322	False	NA	-27	True	AATAAA	-17	NA	21001808	20999772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_21000433_21000646_21000788_21001255_21001412_21001545
transcript_94143.known	chr22	-	1913	4	FSM	ENSG00000184436.12	ENST00000215742.9	1913	4	0	0	0	0	multi-exon	TRUE	canonical	3	157	junction_3	46.2673390921357	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-21000632	True	NA	NA	False	NA	NA	NA	21002118	20999103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21000788_21001255_21001412_21001831
transcript_94144.known	chr22	-	1957	3	FSM	ENSG00000184436.12	ENST00000498406.1	1957	3	0	0	0	0	multi-exon	FALSE	canonical	3	228	junction_2	20.5	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCTCTCCCTGCCGAGGAG	-21000256	False	1486	NA	False	NA	NA	NA	21001742	20999103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646_21000788_21001255
transcript_94145.known	chr22	+	1263	2	FSM	ENSG00000230513.3	ENST00000429962.2	1269	2	0	6	0	5	multi-exon	FALSE	canonical	3	21	junction_1	0	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTAAGAATTGCTTCTATA	21001906	False	NA	20	True	ATTAAA	-33	NA	21001921	21003272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21002830_21002917
transcript_94146.known	chr22	+	1720	2	FSM	ENSG00000230513.3	ENST00000436079.1	1720	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAAGGGAGTTGGGCCCTC	21001870	False	NA	NA	False	NA	NA	NA	21001885	21010125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21002830_21009349
transcript_94147.known	chr22	+	1020	1	FSM	ENSG00000230513.3	ENST00000662660.1	1020	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	21	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACACTGTGTTTTAAGAATTG	21001729	True	NA	12	True	ATTAAA	-25	NA	21002244	21003264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21002200_21003300
transcript_94148.known	chr22	-	1809	2	FSM	ENSG00000184436.12	ENST00000471073.1	1809	2	0	0	0	0	multi-exon	FALSE	canonical	3	269	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGCCTGCTGTCTGGCTCAG	-21000309	False	1486	-27	True	AATAAA	-17	NA	21001795	20999772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21000433_21000646
transcript_94150.known	chr22	+	1110	9	FSM	ENSG00000206140.12	ENST00000682920.1	1110	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	29.9530883215738	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAAGCTCGTGGGTTCGTCGT	NA	False	NA	NA	False	AATAAA	-11	NA	21467318	21469932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21467615_21467893_21468018_21468353_21468432_21468778_21468836_21468943_21469004_21469129_21469195_21469273_21469347_21469493_21469535_21469616
transcript_94153.nic	chr22	+	797	7	ISM	ENSG00000206140.12	ENST00000621561.5	1080	9	706	-10	-5	0	3prime_fragment	FALSE	canonical	3	4	junction_1	29.1242548784037	97	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCGTGGGTTCGTCGTCTG	21467912	True	NA	NA	False	AATAAA	-14	NA	21468092	21469935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_21468203_21468353_21468432_21468778_21468836_21468943_21469063_21469273_21469347_21469493_21469535_21469616
transcript_94159.known	chr22	+	2861	4	FSM	ENSG00000185651.15	ENST00000342192.9	2861	4	0	0	0	0	multi-exon	FALSE	canonical	3	2253	junction_1	216.378269601075	10748	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	21556578	True	NA	16	True	AATAAA	-18	NA	21567713	21624034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21567772_21592860_21592957_21610856_21611044_21621514
transcript_94168.known	chr22	+	2932	3	FSM	ENSG00000185651.15	ENST00000545681.2	2932	3	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	1357	4928	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTAGTCGTGTGGGTTTCTT	NA	False	NA	16	True	AATAAA	-18	NA	21567546	21624034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21567772_21610856_21611044_21621514
transcript_9417.nnic	chr1	+	535	3	NNC	ENSG00000231752.7	novel	591	3	NA	NA	18404	-16833	at_least_one_novel_splicesite	FALSE	canonical	3	6	junction_2	1.5	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTTGGGATGCTTGAAGAT	121537689	True	NA	4	True	ATTAAA	-20	NA	121537748	121539841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_121538002_121538322_121538421_121539657
transcript_94172.known	chr22	-	1066	4	FSM	ENSG00000161179.14	ENST00000398873.4	1066	4	0	0	0	0	multi-exon	TRUE	canonical	3	79	junction_1	104.148398398098	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTGCAATGCAAACACCTTC	-21626881	True	NA	-82	True	NA	NA	NA	21630035	21628166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21628788_21629307_21629408_21629601_21629762_21629850
transcript_94173.nnic	chr22	-	994	3	NIC	ENSG00000161179.14	novel	1410	5	NA	NA	-7	0	combination_of_known_splicesites	FALSE	canonical	3	17	junction_2	31	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGGTGGTTTATCAGCTG	-21626891	True	NA	-4	True	AATAAA	-20	NA	21630045	21628088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_21628788_21629307_21629408_21629850
transcript_94176.known	chr22	+	825	3	FSM	ENSG00000128228.5	ENST00000248958.5	825	3	0	0	0	0	multi-exon	FALSE	canonical	3	1048	junction_1	45	1231	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCGTTTCACTGTGAGCCT	21631839	True	NA	29	True	ATTAAA	-17	NA	21642301	21644299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21642524_21642861_21643059_21643893
transcript_94179.known	chr22	+	4068	20	FSM	ENSG00000100023.20	ENST00000398831.8	4068	20	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_16	27.0308124173987	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCTTATTTTCAATTCTAAT	21663945	True	NA	18	True	ATTAAA	-15	NA	21666011	21697907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21666132_21669912_21669963_21670565_21670612_21670996_21671060_21672329_21672382_21675063_21675116_21681298_21681391_21682436_21682527_21683181_21683258_21684752_21684914_21686482_21686559_21686891_21686999_21687642_21687733_21688072_21688107_21688731_21688850_21693815_21693873_21694592_21694666_21694754_21694818_21694936_21695071_21695393
transcript_94194.known	chr22	-	465	4	FSM	ENSG00000100027.17	ENST00000672036.2	465	4	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_3	17.7451088722749	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGCGAACTTTCCCTTCTC	NA	False	NA	-79	True	NA	NA	NA	21710849	21701128	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21701219_21703369_21703479_21703838_21703883_21710627
transcript_94199.nic	chr22	+	472	2	ISM	ENSG00000100023.20	ENST00000484439.5	863	11	-53	14650	-24	-3381	5prime_fragment	FALSE	canonical	3	222	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTACATGTACATTTAAATGT	21665946	False	NA	NA	False	AATAAA	-21	NA	21665975	21670228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_21666132_21669912
transcript_9420.known	chr1	-	164	1	FSM	ENSG00000206737.1	ENST00000384010.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	35	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTAGTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	143729570	143729406	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_143729400_143729600
transcript_94200.known	chr22	-	5881	9	FSM	ENSG00000100030.15	ENST00000215832.11	5881	9	0	0	0	0	multi-exon	FALSE	canonical	3	348	junction_1	51.5835184433943	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGCTTTATTTCACTAAA	-21854546	True	NA	-5	True	AGTAAA	-18	NA	21867645	21759656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21764241_21769194_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_94201.known	chr22	-	1487	8	FSM	ENSG00000100030.15	ENST00000398822.7	1487	8	0	0	0	0	multi-exon	FALSE	canonical	3	391	junction_3	36.1205464735934	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTACATATATTCTCCTAGG	-21854581	True	NA	-9	True	ATTAAA	-14	NA	21867680	21769039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21769321_21772872_21772983_21788256_21788389_21788693_21788809_21799011_21799129_21805849_21806040_21807663_21807847_21867321
transcript_94202.known	chr22	-	5149	8	FSM	ENSG00000100034.14	ENST00000263212.10	5149	8	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	9.07114735222145	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTGTCGCCCGAGTCCTGC	-21950535	True	NA	-12	True	AATAAA	-15	NA	21952848	21919424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21923472_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_94203.nic	chr22	-	1283	8	NIC	ENSG00000100034.14	novel	1778	7	NA	NA	-28	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_1	44.0741490246255	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	-21950563	True	NA	NA	False	AATAAA	-26	NA	21952876	21924875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_21925029_21925568_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_94205.known	chr22	-	1778	7	FSM	ENSG00000100034.14	ENST00000397495.8	1778	7	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_1	7.60847480700888	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	-21950518	True	NA	NA	False	AATAAA	-26	NA	21952831	21924875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21925663_21931147_21931292_21933390_21933580_21934023_21934227_21939531_21939681_21945842_21946109_21952791
transcript_94208.known	chr22	-	159	2	FSM	ENSG00000100034.14	ENST00000497072.1	159	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCGGGACAAGTTCTCTGG	-21950508	True	NA	NA	False	NA	NA	NA	21952821	21952019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21952149_21952791
transcript_9421.known	chr1	+	2675	2	FSM	ENSG00000232721.3	ENST00000443018.3	2743	2	68	0	68	0	multi-exon	FALSE	canonical	2	18	junction_1	0	197	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGATGGTACCTGGTTTT	143736032	False	NA	NA	False	AATAAA	-16	NA	143736065	143739506	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_143736124_143736889
transcript_94211.known	chr22	-	348	3	FSM	ENSG00000100034.14	ENST00000484588.1	348	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	55.5	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTCTGGCTGGGCATGCT	-21931235	False	NA	NA	False	AATAAA	-26	NA	21931248	21924875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21925029_21925568_21925663_21931147
transcript_94212.known	chr22	-	2834	18	FSM	ENSG00000100038.20	ENST00000357179.10	2834	18	0	0	0	0	multi-exon	TRUE	canonical	3	83	junction_13	41.3565808790683	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCCCCTTTGCTGGT	-21977841	True	NA	NA	False	ATTAAA	-22	NA	21982787	21957024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21957596_21958491_21958694_21959131_21959233_21959586_21959737_21960320_21960450_21962428_21962603_21962746_21962894_21963922_21964029_21964160_21964316_21965284_21965376_21967602_21967717_21968618_21968776_21970209_21970407_21971876_21971952_21972611_21972719_21974356_21974489_21975639_21975808_21982729
transcript_94213.known	chr22	-	561	5	FSM	ENSG00000100038.20	ENST00000456075.5	561	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	89.6994983263563	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGACCCTGGATTTCCTGGG	-21977820	True	NA	NA	False	NA	NA	NA	21982766	21974375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_21974489_21975639_21975808_21975980_21976188_21982413_21982450_21982729
transcript_94214.known	chr22	+	2256	3	FSM	ENSG00000224086.6	ENST00000653280.1	2256	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGAACAAAAATAACTTAAAA	21938222	True	NA	NA	False	NA	NA	NA	21938268	21943372	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_21939614_21941101_21941221_21942580
transcript_94220.nnic	chr22	+	822	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5116	-3056	at_least_one_novel_splicesite	FALSE	canonical	3	177	junction_3	42.6702472455926	211	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	NA	False	NA	12	True	ATTAAA	-18	NA	22298107	22307345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
transcript_94221.nnic	chr22	+	1205	5	NNC	ENSG00000272779.1	novel	1121	8	NA	NA	-5116	-2673	intron_retention	FALSE	canonical	3	177	junction_3	42.6702472455926	170	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTCGTACATCCTTTTCAG	NA	False	NA	NA	False	AGTAAA	-18	NA	22298107	22307728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_22298212_22303223_22303298_22303942_22304115_22306789_22307022_22307105
transcript_94223.nic	chr22	+	779	5	ISM	ENSG00000286129.1	ENST00000652112.1	2895	14	-16	21777	-16	-21777	5prime_fragment	FALSE	canonical	3	119	junction_3	67.2681202353686	188	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTAGCTTTGTGCTTTTCC	NA	False	NA	12	True	ATTAAA	-18	NA	22298107	22307345	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_22298212_22303223_22303298_22303942_22304115_22306832_22307022_22307105
transcript_94235.known	chr22	-	5309	4	FSM	ENSG00000275004.4	ENST00000626650.3	5309	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_2	1.69967317119759	20	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCTGTTGCTGTATTGTTTT	-22506861	True	NA	NA	False	AATAAA	-18	NA	22508742	22484420	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_22489467_22494062_22494181_22507809_22507871_22508658
transcript_94237.known	chr22	-	2148	2	FSM	ENSG00000169548.3	ENST00000302097.3	2148	2	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GATTCTTGTCTTTGGCTTTT	NA	False	NA	3	True	AATAAA	-15	NA	22520270	22513735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_22515702_22520088
transcript_94239.known	chr22	+	6783	23	FSM	ENSG00000186716.21	ENST00000305877.13	6783	23	0	0	0	0	multi-exon	FALSE	canonical	3	300	junction_2	49.5456422014795	117	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCGTGCATGTTGACTTC	23179191	True	NA	NA	False	ATTAAA	-17	NA	23180508	23318037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23182240_23253798_23253981_23260949_23261055_23261354_23261541_23268407_23268516_23271531_23271593_23273080_23273134_23273633_23273775_23283976_23284099_23285032_23285202_23287158_23287279_23288096_23288173_23289516_23289622_23290338_23290414_23292540_23292639_23295023_23295156_23309423_23309484_23310323_23310434_23311696_23311837_23312886_23313022_23313967_23314074_23314551_23314715_23315432
transcript_94243.known	chr22	+	1077	4	FSM	ENSG00000280623.1	ENST00000626825.1	1077	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	5.09901951359278	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGAATAACAGTGATTTTAG	23536130	True	NA	NA	False	AATGAA	-1	NA	23536898	23547167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23537137_23538760_23538839_23544227_23544307_23546485
transcript_94253.known	chr22	-	3041	12	FSM	ENSG00000228315.12	ENST00000421064.5	3041	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	20.2206832984905	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGCCTTGACCTCTTC	-23714342	True	NA	-5	True	NA	NA	NA	23717347	23653168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23653353_23659864_23660001_23683724_23683868_23686830_23686996_23690231_23690357_23694118_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717107
transcript_94260.known	chr22	-	2055	10	FSM	ENSG00000228315.12	ENST00000422506.5	2055	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	17.6138273404802	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-23714351	True	NA	0	True	AATAAA	-20	NA	23717356	23638486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23638943_23659864_23660001_23683724_23683868_23695172_23695518_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_94262.nnic	chr22	-	1712	9	NIC	ENSG00000228315.12	novel	2055	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	7	junction_3	17.1751091699587	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-23714353	True	NA	0	True	AATAAA	-20	NA	23717358	23638486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_23638943_23659864_23660001_23683724_23683868_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_94267.nnic	chr22	-	1569	8	NIC	ENSG00000228315.12	novel	2055	10	NA	NA	-2	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_2	17.4986879974658	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGCTCCCTCTCTTCATT	-23714353	True	NA	0	True	AATAAA	-20	NA	23717358	23638486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_23638943_23659864_23660001_23705428_23705542_23709129_23709242_23709785_23709868_23714186_23714343_23715008_23715195_23717030
transcript_94276.known	chr22	-	567	2	FSM	ENSG00000128218.8	ENST00000248948.4	567	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	53	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTATTGTGAGGGTCATAAG	-23754366	True	NA	-17	True	NA	NA	NA	23754425	23752742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23753199_23754314
transcript_9428.known	chr1	-	2395	4	FSM	ENSG00000263513.6	ENST00000584486.6	2395	4	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_2	85.5686858611256	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	143971986	143955286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_143956482_143964854_143964980_143968923_143969002_143970989
transcript_94289.known	chr22	+	895	6	FSM	ENSG00000169314.15	ENST00000402217.8	895	6	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	2.99332590941915	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGTCTTGGGTTATCTG	23762829	True	NA	15	True	AATAAA	-15	NA	23762989	23765863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764398_23764638_23764714_23764792_23764903_23765720
transcript_94291.known	chr22	+	681	6	FSM	ENSG00000169314.15	ENST00000305199.9	681	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	4.66476151587624	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	23763046	False	NA	13	True	AATAAA	-13	NA	23763206	23765861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764403_23764638_23764714_23764792_23764903_23765720
transcript_94293.known	chr22	+	646	6	FSM	ENSG00000169314.15	ENST00000382821.3	646	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.31058907144937	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGTGTCTTGGGTTATC	23763062	False	NA	13	True	AATAAA	-13	NA	23763222	23765861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23763332_23764086_23764174_23764259_23764413_23764638_23764714_23765376_23765458_23765720
transcript_94313.known	chr22	-	384	3	FSM	ENSG00000250479.9	ENST00000520222.1	384	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_2	465	273	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23744922	True	NA	-3	True	ATTAAA	-19	NA	23767876	23765833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23766027_23766127_23766276_23767833
transcript_94314.known	chr22	-	691	4	FSM	ENSG00000250479.9	ENST00000401675.7	691	4	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_2	403.833574081645	165	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTGTGTGCCTCTCTC	-23744988	True	NA	-3	True	ATTAAA	-19	NA	23767942	23765833	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23766027_23766127_23766297_23767373_23767594_23767833
transcript_94315.known	chr22	+	1730	9	FSM	ENSG00000099956.20	ENST00000407422.8	1730	9	0	0	0	0	multi-exon	TRUE	canonical	3	1683	junction_5	202.542433825606	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTTTAACATAAAAATAATG	NA	False	NA	53	True	NA	NA	NA	23786930	23834540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23787263_23791755_23791868_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_94316.known	chr22	+	5191	9	FSM	ENSG00000099956.20	ENST00000644036.2	5191	9	0	0	0	0	multi-exon	FALSE	canonical	3	295	junction_2	599.709395770151	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTCAGGTCCCACGAAATCTG	NA	False	NA	NA	False	AATAAA	-20	NA	23786965	23838009	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23787263_23791755_23791895_23793558_23793689_23800943_23801082_23803294_23803423_23816769_23816937_23825224_23825416_23833571_23833704_23834140
transcript_94327.known	chr22	-	3093	7	FSM	ENSG00000099958.15	ENST00000318109.12	3093	7	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	35.758448885077	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23836963_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_94328.known	chr22	-	1063	7	FSM	ENSG00000099958.15	ENST00000406855.7	1063	7	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	27.6008252694653	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGACCTGTTGCCTTTTAT	-23838502	True	NA	-5	True	AAGAAA	-29	NA	23839006	23834502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23834933_23837063_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_94329.known	chr22	-	969	6	FSM	ENSG00000099958.15	ENST00000476077.1	969	6	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_3	10.5565145763173	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCTTGGCCCACAGCACT	-23838508	True	NA	-15	True	AATAAA	-15	NA	23839012	23836733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23837155_23837658_23837855_23838351_23838446_23838563_23838638_23838710_23838777_23838894
transcript_94336.known	chr22	+	1048	8	FSM	ENSG00000133460.20	ENST00000405286.6	1048	8	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	11.0822527732683	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCTTATGGTGTTAAAATGC	23856807	True	NA	7	True	ATTAAA	-15	NA	23856950	23882951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23856992_23857420_23857532_23862103_23862203_23868480_23868642_23875116_23875242_23877041_23877172_23882458_23882647_23882758
transcript_94353.known	chr22	+	887	4	FSM	ENSG00000133460.20	ENST00000473740.5	887	4	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	6.84754619472471	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGGAAGACTGCTCGTGGGA	23856856	False	NA	-96	True	NA	NA	NA	23856999	23875211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23857532_23862103_23862203_23868480_23868642_23875116
transcript_9437.known	chr1	-	1658	3	FSM	ENSG00000263513.6	ENST00000369175.4	1658	3	0	0	0	0	multi-exon	FALSE	canonical	2	47	junction_1	133.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATCAGGAAATAGAATAAATT	NA	False	NA	NA	False	NA	NA	NA	143971965	143955877	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_143956482_143968923_143969002_143970989
transcript_94380.known	chr22	-	613	1	FSM	ENSG00000272973.1	ENST00000609825.1	613	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTGAATTCTTGGGG	NA	False	NA	NA	False	AATAAA	-16	NA	23857039	23856426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23856400_23857000
transcript_94381.known	chr22	+	557	3	FSM	ENSG00000240972.2	ENST00000215754.8	557	3	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_2	2178	163969	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGAGTGCCTCGGGGTTCCTT	NA	False	NA	16	True	AATAAA	-15	NA	23894382	23895223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23894583_23894771_23894945_23895039
transcript_94382.known	chr22	+	435	2	FSM	ENSG00000240972.2	ENST00000498385.1	435	2	0	0	0	0	multi-exon	FALSE	canonical	3	30849	junction_1	0	2958	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885406	False	NA	20	True	AATAAA	-19	NA	23894697	23895227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23894945_23895039
transcript_94383.known	chr22	+	589	2	FSM	ENSG00000240972.2	ENST00000465752.1	589	2	0	0	0	0	multi-exon	FALSE	canonical	3	35205	junction_1	0	1040	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCCTCGGGGTTCCTTGGCT	23885158	True	NA	20	True	AATAAA	-19	NA	23894449	23895227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23894583_23894771
transcript_94394.nnic	chr22	-	1243	6	NNC	ENSG00000133433.11	novel	1108	5	NA	NA	-31	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.5435491221502	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23961226	23957413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23960690_23960795_23961019
transcript_94399.known	chr22	-	1108	5	FSM	ENSG00000133433.11	ENST00000290765.9	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	14.7732867026942	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23961195	23957413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23957933_23958284_23958459_23958550_23958702_23960293_23960382_23961019
transcript_94400.nnic	chr22	+	541	4	Fusion	ENSG00000231271.1_ENSG00000228039.3	novel	289	3	NA	NA	6	9	multi-exon	FALSE	non_canonical	0	0	junction_1	0	15	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGGACCTGCCTCCAGTA	NA	False	NA	NA	False	NA	NA	NA	23949923	23964383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_+_23950006_23953886_23954041_23963751_23963943_23964269
transcript_94403.nnic	chr22	+	695	3	NNC	ENSG00000228039.3	novel	254	2	NA	NA	-3011	156	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTTGGTTGAAGAGAAGAC	NA	False	NA	NA	False	AATAAA	-19	NA	23960768	23964530	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_23960918_23963751_23964029_23964261
transcript_94419.known	chr22	+	1184	5	FSM	ENSG00000099984.11	ENST00000634759.1	1184	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_2	14.1509716980849	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGTTATTGGTTTTAC	NA	False	NA	NA	False	AATAAA	-26	NA	23980057	23983915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23980310_23980947_23981036_23982627_23982779_23982870_23983045_23983396
transcript_9442.known	chr1	-	588	3	FSM	ENSG00000232527.8	ENST00000452399.6	588	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	5.5	70	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCTGACTGAATGCTGTGC	NA	False	NA	NA	False	AATAAA	-21	NA	144250326	144227028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144227380_144245685_144245821_144250224
transcript_94427.known	chr22	+	1582	3	FSM	ENSG00000099974.8	ENST00000215770.6	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	430.5	406	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTATAGATGCAATTATCAAT	NA	False	NA	NA	False	AATAAA	-18	NA	23966887	23972556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_23967023_23967385_23967562_23971285
transcript_9443.known	chr1	-	314	2	FSM	ENSG00000237343.1	ENST00000455105.1	314	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACTTTGGCGCTACTATTT	NA	False	NA	NA	False	AATAAA	-28	NA	144419192	144418112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144418371_144419136
transcript_94434.known	chr22	-	699	5	FSM	ENSG00000224205.2	ENST00000437021.2	699	5	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	382	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGCGTGTCCCACACTTGCT	NA	False	NA	NA	False	NA	NA	NA	23991421	23976871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23977068_23977400_23977578_23987318_23987470_23989126_23989216_23991335
transcript_94435.known	chr22	-	565	3	FSM	ENSG00000099977.15	ENST00000398344.9	565	3	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_2	41	26599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGACTTCTTACCTTCTAT	NA	False	NA	-6	True	AATAAA	-24	NA	23974441	23971369	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23971624_23973767_23973944_23974306
transcript_94436.known	chr22	-	805	5	FSM	ENSG00000285762.1	ENST00000404092.5	805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	556.256011203475	2351	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTCAAACATGACTTCTTA	NA	False	NA	-14	True	AATAAA	-16	NA	23980469	23971377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23971624_23973767_23973944_23974306_23974440_23976875_23977068_23980411
transcript_94437.known	chr22	-	1048	2	FSM	ENSG00000099977.15	ENST00000444947.2	1048	2	0	0	0	0	multi-exon	FALSE	canonical	3	1070	junction_1	0	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCATGTCTAGGAGGAAGTAA	NA	False	NA	NA	False	NA	NA	NA	23974491	23973080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23973944_23974306
transcript_94438.known	chr22	-	573	3	FSM	ENSG00000099977.15	ENST00000430101.2	573	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	534	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAAAGATATTCTTGAGCCA	NA	False	NA	NA	False	NA	NA	NA	23974459	23973103	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_23973348_23973767_23973944_23974306
transcript_9444.known	chr1	-	165	1	FSM	ENSG00000278099.1	ENST00000617626.1	165	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATTTCTTTTTTTCTGGTTTC	NA	False	NA	NA	False	GGGGCT	-20	NA	144551943	144551778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144551800_144551900
transcript_94440.nic	chr22	+	1347	10	ISM	ENSG00000099991.18	ENST00000263119.10	7233	37	-3	122324	-3	0	5prime_fragment	FALSE	canonical	3	19	junction_1	9.08940503831892	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	24009856	True	NA	NA	False	NA	NA	NA	24011300	24056304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24041138_24041274_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_94442.known	chr22	+	1321	9	FSM	ENSG00000099991.18	ENST00000454754.5	1321	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	11.1740491765519	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AAAAAAGAAGAGAAAGTAGA	NA	False	NA	NA	False	NA	NA	NA	24011191	24056304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24011368_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_94444.known	chr22	+	1472	9	FSM	ENSG00000099991.18	ENST00000445422.5	1472	9	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	10.8397416943394	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTAGACTTCCAGGAGCTTC	24009971	False	NA	NA	False	AAAAAG	-8	NA	24011415	24056318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24011729_24035443_24035521_24036088_24036182_24038347_24038462_24042903_24043085_24049090_24049221_24050824_24050975_24054872_24055160_24056191
transcript_94445.nic	chr22	+	2431	3	NIC	ENSG00000128271.22	novel	926	2	NA	NA	277	0	combination_of_known_junctions	FALSE	canonical	3	28	junction_1	0.5	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAATGGCGTCTGAGTTCGTT	24423541	True	NA	24	True	AATAAA	-37	NA	24423907	24442357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_24423958_24433130_24433737_24440582
transcript_94446.known	chr22	-	1606	6	FSM	ENSG00000138867.17	ENST00000404664.7	1606	6	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_5	59.7708959277005	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCATGCAGAGCCCTGGCCG	-24555328	True	NA	NA	False	NA	NA	NA	24555935	24542397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_24543098_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_94447.known	chr22	-	3584	6	FSM	ENSG00000138867.17	ENST00000621833.4	3584	6	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	81.1502310532755	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGCCTTTATGAAGCTGT	-24555328	True	NA	-10	True	AATAAA	-35	NA	24555935	24540422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_24543101_24543841_24544084_24546913_24547006_24547907_24548074_24548916_24549002_24555614
transcript_9445.known	chr1	-	164	1	FSM	ENSG00000277918.1	ENST00000610976.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTTGTAGTTTAAAGAA	NA	False	NA	NA	False	NA	NA	NA	144560829	144560665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144560700_144560800
transcript_94450.known	chr22	+	2630	16	FSM	ENSG00000100031.19	ENST00000400382.6	2630	16	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	49.1648474239697	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCCACTCTCTGGGCCTCA	24601500	True	NA	25	True	AATAAA	-44	NA	24603192	24628996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24603528_24607953_24608024_24609964_24610034_24610249_24610532_24611074_24611246_24614775_24614907_24615040_24615128_24620327_24620521_24620912_24621071_24623106_24623257_24623779_24623917_24627431_24627620_24627851_24627980_24628080_24628194_24628274_24628389_24628692
transcript_9446.known	chr1	-	7120	10	FSM	ENSG00000196369.12	ENST00000612199.4	7120	10	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_7	57.4194013755019	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAATCCTCAGACTGTTA	NA	False	NA	21	True	ATTAAA	-42	NA	145095528	144887264	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_144892382_144893407_144893510_144897115_144897338_144905090_144905220_144905858_144906075_144914691_144914755_144955438_144955602_144995007_144995201_145092834_145093444_145095222
transcript_94479.known	chr22	+	3466	4	FSM	ENSG00000100028.12	ENST00000215829.8	3466	4	0	0	0	0	multi-exon	FALSE	canonical	3	2405	junction_1	51.0968579160098	5463	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGTGTCATAGTGATCA	24522077	True	NA	20	True	ATTAAA	-14	NA	24555998	24574971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24556072_24557656_24557801_24567983_24568177_24571915
transcript_94480.known	chr22	+	811	7	FSM	ENSG00000100031.19	ENST00000452551.5	811	7	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	32.7994749280466	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGCCATGCGGCAGACTT	24601520	True	NA	NA	False	NA	NA	NA	24603212	24615127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24603322_24607953_24608024_24609964_24610034_24610357_24610532_24611074_24611246_24614775_24614907_24615040
transcript_94490.known	chr22	-	597	2	FSM	ENSG00000282012.1	ENST00000633827.1	597	2	0	0	0	0	multi-exon	FALSE	canonical	3	85	junction_1	0	320	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTGTTTGGTGGTCTCTTC	-24695443	True	NA	1	True	AATAAA	-22	NA	24696003	24691121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_24691562_24695846
transcript_94496.nnic	chr22	-	689	2	Antisense	novelGene_ENSG00000237601.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	2	3	junction_1	0	39	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATTTACAGAACTTACTGAC	NA	False	NA	-7	True	AATAAA	-30	NA	24707609	24700926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr22_-_24701298_24707291
transcript_94499.known	chr22	+	344	4	FSM	ENSG00000167037.19	ENST00000470591.1	344	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	12.0277457017791	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGGAGTGCCTTCAG	24805726	True	NA	4	True	ATTAAA	-17	NA	24806306	24814192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_24806345_24806440_24806485_24813677_24813756_24814008
transcript_94502.nnic	chr22	+	337	3	NIC	ENSG00000167037.19	novel	344	4	NA	NA	25	0	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	10	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTTTTGGAGTGCCTTCAG	24805655	True	NA	4	True	ATTAAA	-17	NA	24806235	24814192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_24806345_24806440_24806485_24814008
transcript_94503.nnic	chr22	+	444	3	NIC	ENSG00000167037.19	novel	344	4	NA	NA	25	107	combination_of_known_splicesites	FALSE	canonical	1	6	junction_2	10	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAGCATATACTGGCATTTT	24805655	True	NA	NA	False	ATTAAA	-31	NA	24806235	24814299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_24806345_24806440_24806485_24814008
transcript_94505.known	chr22	+	1280	2	FSM	ENSG00000236641.2	ENST00000454253.2	1280	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTTGTCTTAGCGTCTGCT	NA	False	NA	6	True	AATAAA	-17	NA	25212084	25213826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25212841_25213302
transcript_94506.known	chr22	+	1019	6	FSM	ENSG00000244752.3	ENST00000651629.1	1019	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.11468474101777	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTGTGGGTCTTTGATCT	NA	False	NA	NA	False	AATAAA	-19	NA	25212563	25231870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25212841_25221403_25221484_25224917_25225037_25227852_25227986_25229435_25229579_25231603
transcript_94508.nnic	chr22	-	1063	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-546	-860	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.85861230093008	65	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTATTTTGCTTCAT	NA	False	NA	NA	False	AATAAA	-15	NA	25283220	25280388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
transcript_94511.nnic	chr22	-	913	4	NNC	ENSG00000233577.6	novel	426	3	NA	NA	-448	845	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	3.85861230093008	17	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATTTTGCCTGGCACC	-25283020	True	NA	NA	False	NA	NA	NA	25283122	25280440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25281256_25281386_25282030_25282292_25282981
transcript_94513.nnic	chr22	-	836	3	NNC	ENSG00000233577.6	novel	428	2	NA	NA	-448	-860	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	4.5	29	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTGTTTATTTTGCTTCAT	-25283020	True	NA	NA	False	AATAAA	-15	NA	25283122	25280388	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25282030_25282292_25282981
transcript_94514.nnic	chr22	-	784	3	NNC	ENSG00000233577.6	novel	428	2	NA	NA	-448	845	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	4.5	14	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGCATTTTGCCTGGCACC	-25283020	True	NA	NA	False	NA	NA	NA	25283122	25280440	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_25280823_25282030_25282292_25282981
transcript_94518.nnic	chr22	+	1063	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	-25	-460	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	40.1825832917696	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTAACATCTATTTCT	25445963	True	NA	16	True	AATAAA	-27	NA	25448054	25461208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_94519.nnic	chr22	+	1533	6	NNC	ENSG00000100058.13	novel	1389	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	3	24	junction_2	40.1825832917696	114	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	25445963	True	NA	32	True	AATAAA	-24	NA	25448054	25461678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_94520.nnic	chr22	+	894	6	NNC	ENSG00000100058.13	novel	977	6	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_5	46.0460638925848	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGTTTGACTTTTCA	25445963	True	NA	NA	False	ATTAAA	-17	NA	25448054	25520854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_25448285_25453315_25453435_25455711_25455841_25457258_25457402_25459415_25459516_25520681
transcript_94525.known	chr22	+	1364	5	FSM	ENSG00000100058.13	ENST00000382734.10	1389	5	25	0	6	0	multi-exon	FALSE	canonical	3	79	junction_1	15.833114033569	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	25446013	True	NA	32	True	AATAAA	-24	NA	25448104	25461678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25460866
transcript_94527.nnic	chr22	+	746	5	FSM	ENSG00000100058.13	ENST00000686640.1	745	5	-3	2	-3	0	multi-exon	FALSE	canonical	2	12	junction_4	42.2640509180083	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATTCCTGTTTGACTTTTCA	25445992	True	NA	NA	False	ATTAAA	-17	NA	25448083	25520854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415_25459516_25520681
transcript_94530.nic	chr22	+	739	4	FSM	ENSG00000100058.13	ENST00000415709.6	724	4	-15	0	-3	0	multi-exon	FALSE	canonical	3	79	junction_1	17.2111075245674	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGCTGTGGGTCTTTGATC	25445992	True	NA	NA	False	AATGAA	-18	NA	25448083	25459681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25448285_25455711_25455841_25457258_25457402_25459415
transcript_94531.nnic	chr22	+	783	4	NIC	ENSG00000100058.13	novel	1389	5	NA	NA	0	-460	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	39.4208066888541	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTACTAACATCTATTTCT	25445995	True	NA	16	True	AATAAA	-27	NA	25448086	25461208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_25448285_25457258_25457402_25459415_25459516_25460866
transcript_94532.nnic	chr22	+	1253	4	NIC	ENSG00000100058.13	novel	1389	5	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	3	22	junction_1	39.4208066888541	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGATTCTTCAATCAATACC	25445995	True	NA	32	True	AATAAA	-24	NA	25448086	25461678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_25448285_25457258_25457402_25459415_25459516_25460866
transcript_94536.known	chr22	+	552	3	FSM	ENSG00000133454.16	ENST00000539544.1	552	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGTGATCTCCTCACTGAG	NA	False	NA	NA	False	AATAAA	-14	NA	25953534	25965071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_25953621_25955178_25955365_25964791
transcript_94542.known	chr22	-	5066	14	FSM	ENSG00000100099.21	ENST00000398145.7	5066	14	0	0	0	0	multi-exon	TRUE	canonical	3	78	junction_13	29.3350367086565	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGGTTTAACTGACTCACAG	-26481806	True	NA	NA	False	AATAAA	-35	NA	26483783	26450881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483673
transcript_94543.known	chr22	-	3786	14	FSM	ENSG00000100099.21	ENST00000336873.9	3786	14	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_13	27.9460596242245	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCAGCATTTTTTTGTGAC	-26481818	True	NA	-20	True	AATAAA	-36	NA	26483795	26452082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26453405_26457858_26457968_26458444_26458578_26463916_26464827_26465454_26465552_26466225_26466263_26468550_26468624_26470718_26470814_26472301_26472419_26472831_26472940_26476992_26477137_26479264_26479356_26481721_26482241_26483764
transcript_94548.nic	chr22	-	1314	4	ISM	ENSG00000100099.21	ENST00000398145.7	5066	14	-50	25711	3	398	5prime_fragment	FALSE	canonical	3	78	junction_3	36.0832371053374	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	-26481856	True	NA	NA	False	ATTAAA	-11	NA	26483833	26476592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483673
transcript_94549.nic	chr22	-	1238	4	ISM	ENSG00000100099.21	ENST00000466781.5	6136	13	9	24510	0	398	5prime_fragment	FALSE	canonical	3	30	junction_3	58.7026404857567	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	-26481851	True	NA	NA	False	ATTAAA	-11	NA	26483828	26476592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483744
transcript_94550.nic	chr22	-	1244	4	ISM	ENSG00000100099.21	ENST00000422379.2	1942	12	-71	12354	-17	398	5prime_fragment	FALSE	canonical	3	87	junction_3	31.8433666561813	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATATTGCTTGAGTCCAGG	-26481877	True	NA	NA	False	ATTAAA	-11	NA	26483854	26476592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26477137_26479264_26479356_26481721_26482241_26483764
transcript_94551.known	chr22	+	3370	4	FSM	ENSG00000128203.7	ENST00000215906.6	3370	4	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_1	11.0855260988773	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGAAGTGGTGAGGTCATCT	26428566	True	NA	12	True	AATAAA	-21	NA	26429259	26445015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26429487_26433391_26434502_26442458_26442573_26443096
transcript_94556.known	chr22	-	486	2	FSM	ENSG00000100099.21	ENST00000491142.1	486	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTTGCAGGTGTGCCCCTTT	NA	False	NA	-5	True	AGTAAA	-15	NA	26452892	26451479	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26451822_26452748
transcript_94557.known	chr22	-	2896	16	FSM	ENSG00000100109.17	ENST00000405938.5	2896	16	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_14	59.5201553164043	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTGCCCCTAAGAGGGAT	-26507824	False	NA	-59	True	NA	NA	NA	26512499	26491985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26511118_26511196_26512098_26512176_26512393
transcript_94560.known	chr22	-	3539	15	FSM	ENSG00000100109.17	ENST00000407690.6	3539	15	0	0	0	0	multi-exon	TRUE	canonical	3	141	junction_10	21.0940556478234	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATGCATTAAAGAGTCAT	-26507798	True	NA	NA	False	AATAAA	-21	NA	26512473	26491239	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098_26512176_26512393
transcript_94561.known	chr22	+	4020	7	FSM	ENSG00000100104.13	ENST00000215917.11	4020	7	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_2	20.8299997332907	40	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGACCTAACTCATTCCTA	26480164	True	NA	6	True	AATAAA	-17	NA	26483876	26494658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26484100_26486022_26486064_26488028_26488289_26488389_26488489_26490043_26490199_26491024_26491071_26491462
transcript_94564.known	chr22	-	2974	14	FSM	ENSG00000100109.17	ENST00000407431.5	2974	14	0	0	0	0	multi-exon	FALSE	canonical	3	141	junction_10	21.4351919893735	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGTAACTTCTTTACTCAGG	-26507702	True	NA	0	True	AATAAA	-26	NA	26512377	26491926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26492369_26494138_26494305_26494796_26494940_26496072_26496317_26496720_26496890_26498868_26498976_26499103_26499632_26501899_26502053_26503665_26503794_26506302_26506460_26506774_26506929_26510063_26510282_26510616_26510703_26512098
transcript_94565.known	chr22	+	981	2	FSM	ENSG00000261188.2	ENST00000565764.2	1663	2	26	656	8	-656	multi-exon	FALSE	canonical	3	31	junction_1	0	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTCTGAAGAAGGGACCTTT	26512132	True	NA	NA	False	NA	NA	NA	26512554	26513912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26513035_26513411
transcript_94566.known	chr22	+	2032	1	FSM	ENSG00000261188.2	ENST00000566814.1	2032	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	43	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCGACTTTGCTACTTCTT	26512114	True	NA	21	True	AGTAAA	-18	NA	26512536	26514568	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26512500_26514600
transcript_94572.known	chr22	-	5653	7	FSM	ENSG00000128294.16	ENST00000338754.9	5653	7	0	0	0	0	multi-exon	FALSE	canonical	3	389	junction_6	34.5273643490042	263	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCATATCTTCTCATCAGGAT	-26586103	True	NA	-12	True	AATAAA	-18	NA	26590132	26521995	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26540788_26541719_26544603_26544676_26590052
transcript_94578.nnic	chr22	-	986	6	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-13	0	combination_of_known_splicesites	FALSE	canonical	3	13	junction_4	168.548627997976	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-26586116	True	NA	18	True	AATAAA	-43	NA	26590145	26525745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26544603_26544676_26590052
transcript_9458.known	chr1	+	2423	4	FSM	ENSG00000215784.6	ENST00000400889.3	2423	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_2	70.153799295231	327	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATAAGGCTAATGTTTATTG	NA	False	NA	NA	False	AATAAA	-20	NA	145095973	145112696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145097000_145098987_145099066_145103006_145103132_145111502
transcript_94582.nnic	chr22	-	902	5	NIC	ENSG00000128294.16	novel	5653	7	NA	NA	-1	0	combination_of_known_splicesites	TRUE	canonical	1	2	junction_4	191.698167701207	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATAGGGTTTTTTTTTTCTT	-26586104	True	NA	18	True	AATAAA	-43	NA	26590133	26525745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26526268_26528213_26528263_26532694_26532746_26536287_26536487_26590052
transcript_94590.nnic	chr22	-	682	2	NNC	ENSG00000128294.16	novel	5653	7	NA	NA	-1	-47104	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTAAAAATCTCATGCAA	-26586104	True	NA	NA	False	AATATA	-19	NA	26590133	26588593	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_26589195_26590052
transcript_94592.nnic	chr22	-	1123	6	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	1119	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	13.4966662550424	56	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26616879	False	NA	-1	True	AATAAA	-22	NA	26616908	26599277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26616775
transcript_94593.known	chr22	-	1041	6	FSM	ENSG00000100122.7	ENST00000647684.1	1041	6	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_5	14.5244621242922	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26617998	True	NA	-1	True	AATAAA	-22	NA	26618027	26599277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26617976
transcript_94594.nnic	chr22	-	1156	6	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	970	-116	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_5	13.4966662550424	30	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTGGATCTGTAAAC	-26617028	False	NA	-3	True	AATAAA	-18	NA	26617057	26599393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139_26616339_26616775
transcript_94596.nnic	chr22	-	1083	5	NNC	ENSG00000100122.7	novel	1041	6	NA	NA	-4475	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_4	16.5906600230371	34	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26612775	False	NA	-1	True	AATAAA	-22	NA	26612804	26599277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26612512
transcript_94600.nic	chr22	-	1100	5	ISM	ENSG00000100122.7	ENST00000647684.1	1041	6	1579	0	1579	0	3prime_fragment	FALSE	canonical	3	23	junction_3	8.07774721070176	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26616358	True	NA	-1	True	AATAAA	-22	NA	26616448	26599277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139
transcript_94603.nic	chr22	-	984	5	ISM	ENSG00000100122.7	ENST00000647684.1	1041	6	1579	116	1579	-116	3prime_fragment	FALSE	canonical	3	23	junction_3	8.07774721070176	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTGGATCTGTAAAC	-26616358	True	NA	-3	True	AATAAA	-18	NA	26616448	26599393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_26599674_26601878_26602022_26607888_26608022_26612071_26612191_26616139
transcript_94604.nic	chr22	-	842	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	-59	0	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	14.3527000944073	101	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCTGCCTGTTATGTGAG	-26608359	False	NA	-1	True	AATAAA	-22	NA	26608388	26599277	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
transcript_94605.nic	chr22	-	726	4	NIC	ENSG00000100122.7	novel	1041	6	NA	NA	-59	-116	combination_of_known_junctions	FALSE	canonical	2	11	junction_3	14.3527000944073	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTCCTGGATCTGTAAAC	-26608359	False	NA	-3	True	AATAAA	-18	NA	26608388	26599393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_26599674_26601878_26602022_26607888_26608022_26608218
transcript_94606.known	chr22	+	809	6	FSM	ENSG00000196431.4	ENST00000354760.4	809	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	1.62480768092719	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	26621892	True	NA	6	True	AATAAA	-18	NA	26621962	26630669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26621987_26622584_26622636_26623233_26623353_26625480_26625623_26628287_26628431_26630339
transcript_94609.nnic	chr22	+	471	2	NNC	ENSG00000196431.4	novel	809	6	NA	NA	6973	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTAGTTGTGCTTTTCAATTT	26628885	False	NA	6	True	AATAAA	-18	NA	26628955	26630669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_26629097_26630339
transcript_94618.known	chr22	+	682	4	FSM	ENSG00000244625.7	ENST00000651474.1	682	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.02768199119819	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTTTCGGAGGTTGACAT	26672735	False	NA	NA	False	ATTAAA	-19	NA	26672746	26719282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26672988_26717252_26717460_26718139_26718232_26719140
transcript_94619.nic	chr22	+	1074	4	Fusion	ENSG00000244625.7_ENSG00000225783.9	novel	706	3	NA	NA	-11	0	multi-exon	FALSE	canonical	0	0	junction_3	4.02768199119819	10	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	26672724	False	NA	5	True	AATAAA	-17	NA	26672735	26722172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_+_26672988_26717252_26717460_26718139_26718232_26721649
transcript_94624.nnic	chr22	+	982	3	Fusion	ENSG00000244625.7_ENSG00000225783.9	novel	706	3	NA	NA	-11	0	multi-exon	FALSE	canonical	0	0	junction_2	4.5	31	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	26672724	False	NA	5	True	AATAAA	-17	NA	26672735	26722172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_+_26672988_26717252_26717460_26721649
transcript_94625.nnic	chr22	+	626	3	NNC	ENSG00000244625.7	novel	592	3	NA	NA	-11	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	4.5	15	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGCCCTGTCCTGGTTCACTC	26672724	False	NA	5	True	AATAAA	-17	NA	26672735	26722172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_26672988_26717252_26717460_26722005
transcript_94628.known	chr22	+	10069	5	FSM	ENSG00000225783.9	ENST00000620145.5	10074	5	5	0	0	0	multi-exon	FALSE	canonical	3	37	junction_3	9.41740410091868	155	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAACATGACTGTGGCCTATG	26654910	True	NA	15	True	ATTAAA	-17	NA	26657519	26676475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26657655_26663315_26663399_26665530_26666938_26667184_26667311_26668157
transcript_94631.known	chr22	+	841	3	FSM	ENSG00000235271.6	ENST00000438113.2	841	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCACTTGCTTGTGAGCAAA	NA	False	NA	NA	False	AATAAA	-35	NA	26903339	26920935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_26903432_26906577_26906768_26920376
transcript_94646.nnic	chr22	-	1315	5	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-29798	799	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_3	4.96865172858795	7	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCGTGGAAAGGTCTT	-27744756	False	NA	-38	True	ATTAAA	-17	NA	27744768	27675759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27676208_27677333_27677526_27689719_27689886_27697590_27697702_27744370
transcript_94650.nnic	chr22	-	1528	4	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-29810	799	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_2	4.02768199119819	11	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCGTGGAAAGGTCTT	-27744768	False	NA	-38	True	ATTAAA	-17	NA	27744780	27675759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27676208_27676409_27676888_27677333_27677526_27744370
transcript_94655.nnic	chr22	-	1094	4	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-29769	799	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	5.90668171555645	12	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACCAGCGTGGAAAGGTCTT	-27742576	True	NA	-38	True	ATTAAA	-17	NA	27744739	27675759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27676208_27689719_27689886_27697590_27697702_27744370
transcript_9466.nnic	chr1	+	2250	3	NIC	ENSG00000215784.6	novel	2423	4	NA	NA	-29	-77	combination_of_known_splicesites	FALSE	canonical	2	46	junction_2	175.5	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCATTCTTCCTTTAATTTTT	NA	False	NA	NA	False	AATAAA	-18	NA	145095944	145112619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145097000_145098987_145099066_145111502
transcript_94663.nnic	chr22	-	609	2	NNC	ENSG00000227838.1	novel	819	5	NA	NA	-29769	-89	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGCTATGGGAGGCTTTGT	-27742576	True	NA	NA	False	AATAAA	-21	NA	27744739	27676647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27676888_27744370
transcript_94665.known	chr22	-	1017	12	FSM	ENSG00000180957.19	ENST00000634017.1	1017	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	303.580996585101	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCCCAGATGTGTGCTTGT	-27902303	True	NA	NA	False	NA	NA	NA	27919199	27853578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919101
transcript_94670.known	chr22	+	1141	5	FSM	ENSG00000235954.8	ENST00000662424.1	1141	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	66.4807302908143	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	27917986	True	NA	NA	False	ATTAAA	-21	NA	27919498	27986392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27940019_27940172_27985691
transcript_94674.known	chr22	+	807	4	FSM	ENSG00000235954.8	ENST00000425112.2	1022	4	52	163	19	53	multi-exon	FALSE	canonical	3	12	junction_3	68.3585319392458	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTTTGATAAGTGTCTGGC	27918005	True	NA	NA	False	NA	NA	NA	27919517	27986229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922179_27935150_27935231_27985691
transcript_94678.known	chr22	+	898	3	FSM	ENSG00000235954.8	ENST00000437713.7	920	3	22	0	3	0	multi-exon	FALSE	canonical	3	126	junction_2	16	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	27917913	True	NA	20	True	AATAAA	-30	NA	27919425	27924963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922179_27924346
transcript_94683.known	chr22	+	626	3	FSM	ENSG00000235954.8	ENST00000670585.1	626	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	78	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTGATTGTAATGGTTCC	27917985	True	NA	-26	True	AATAAA	-27	NA	27919497	27924714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017_27922228_27924346
transcript_94688.known	chr22	+	874	3	FSM	ENSG00000235954.8	ENST00000454996.7	894	3	7	13	2	-13	multi-exon	FALSE	canonical	3	12	junction_2	6	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTTATAAATTACCCAGTC	27917927	True	NA	NA	False	ATTAAA	-8	NA	27919439	27986379	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27935150_27935231_27985691
transcript_94693.known	chr22	+	662	2	FSM	ENSG00000235954.8	ENST00000436996.1	662	2	0	0	0	0	multi-exon	FALSE	canonical	3	158	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATTGAATTTAGCCCCTAAA	27917924	True	NA	NA	False	AAGAAA	-21	NA	27919436	27922570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27922017
transcript_94696.known	chr22	+	846	2	FSM	ENSG00000235954.8	ENST00000419253.1	846	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTCTCGAATGGTATCT	NA	False	NA	NA	False	ATTAAA	-21	NA	27919400	27986392	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27985691
transcript_94697.known	chr22	+	706	2	FSM	ENSG00000235954.8	ENST00000428818.5	706	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGGTCAGATTATTCTT	27917944	True	NA	20	True	AATAAA	-30	NA	27919456	27924963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27919546_27924346
transcript_94699.known	chr22	+	157	1	FSM	ENSG00000276150.1	ENST00000611117.1	157	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTATGACAGCTGAAGATGTT	27920509	False	NA	86	True	AATAGA	-38	NA	27922021	27922178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_27922000_27922200
transcript_94700.known	chr22	-	2914	12	FSM	ENSG00000180957.19	ENST00000335272.10	2914	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_8	252.376800809379	894	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGCTTGAGTGGTTG	-27902360	True	NA	-1	True	AATAAA	-19	NA	27919256	27851668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_94701.known	chr22	-	2826	11	FSM	ENSG00000180957.19	ENST00000320996.14	2826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	308.409289743354	435	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-27902359	True	NA	-2	True	AATAAA	-18	NA	27919255	27851669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_27853664_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896627_27897129_27897138_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_94702.known	chr22	-	2963	11	NNC	ENSG00000180957.19	novel	2914	12	NA	NA	-50	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_7	219.870325419325	453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTGTGTGCTTGAGTGGTT	-27902410	True	NA	-2	True	AATAAA	-18	NA	27919306	27851669	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_27853664_27854853_27854940_27858386_27858510_27860130_27860242_27873737_27873816_27894554_27894639_27896551_27896635_27897800_27897893_27910963_27911110_27914316_27914348_27919171
transcript_94704.known	chr22	-	1959	16	FSM	ENSG00000183765.23	ENST00000405598.5	1959	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	316.890489321188	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACCTGATGGAACCTGGG	-28729552	True	NA	-37	True	NA	NA	NA	28741800	28687761	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28737884_28738039_28741768
transcript_94705.known	chr22	-	1923	16	FSM	ENSG00000183765.23	ENST00000650281.1	1923	16	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_14	315.664477289134	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATTAAAAACCTGATGGAACC	-28729558	True	NA	-41	True	NA	NA	NA	28741806	28687765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28738081_28738198_28741768
transcript_94712.known	chr22	-	1510	14	FSM	ENSG00000183765.23	ENST00000425190.7	1510	14	0	0	0	0	multi-exon	FALSE	canonical	3	61	junction_13	255.063050564588	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729563	True	NA	-18	True	ATTAAA	-18	NA	28741811	28687742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
transcript_94719.nic	chr22	-	1527	13	NIC	ENSG00000183765.23	novel	2560	16	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	3	43	junction_7	336.328491458376	146	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28741879	False	NA	-18	True	ATTAAA	-18	NA	28741890	28687742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28741768
transcript_94724.known	chr22	-	1224	12	FSM	ENSG00000183765.23	ENST00000649563.1	1224	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	291.549493976609	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACCTGGGCTTTGTGCTTC	-28729558	True	NA	-26	True	ATTAAA	-10	NA	28741806	28687750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28741768
transcript_94748.known	chr22	+	792	6	FSM	ENSG00000100209.11	ENST00000420442.5	792	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	42.4575081699339	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGGCTCACACCTGTAAT	28739595	True	NA	3	True	AATAAA	-15	NA	28742060	28757213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_94756.known	chr22	+	846	6	FSM	ENSG00000100209.11	ENST00000495977.1	846	6	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_3	50.9195443813081	144	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28742265	True	NA	6	True	AATAAA	-17	NA	28742700	28757510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742729_28743881_28743979_28744614_28744710_28745863_28746009_28751240_28751289_28757077
transcript_94767.known	chr22	+	955	5	FSM	ENSG00000100209.11	ENST00000398941.6	955	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_3	58.031780086432	200	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTATATTTCTTTTCTGGCTT	28739589	True	NA	11	True	AATAAA	-22	NA	28742054	28757515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744710_28751240_28751289_28757077
transcript_94787.known	chr22	+	656	4	FSM	ENSG00000100209.11	ENST00000485599.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	73.8120736886739	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	CTCAAAAAAAAAAAAGTATC	28739685	False	NA	NA	False	NA	NA	NA	28742150	28745543	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743979_28744614_28744705_28745255
transcript_9480.nnic	chr1	-	1132	3	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	76	4	combination_of_known_splicesites	TRUE	canonical	1	1	junction_1	4	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	-145215856	True	NA	NA	False	AATAAA	-23	NA	145215982	145164094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145164639_145170941_145171186_145215638
transcript_94808.nnic	chr22	+	796	3	NIC	ENSG00000100209.11	novel	1106	6	NA	NA	-22	0	combination_of_known_splicesites	FALSE	canonical	2	10	junction_1	69	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28739551	True	NA	6	True	AATAAA	-17	NA	28742016	28757510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_28742332_28751240_28751289_28757077
transcript_9481.known	chr1	-	1015	3	FSM	ENSG00000272419.6	ENST00000621798.4	1015	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAAATTGTGTGATTTTTCAG	-145215932	True	NA	NA	False	AATAAA	-19	NA	145216058	145164098	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145164639_145214676_145214732_145215638
transcript_94813.nic	chr22	-	644	2	ISM	ENSG00000183765.23	ENST00000398017.3	713	6	-48	12394	-12	-12394	5prime_fragment	FALSE	canonical	2	7	junction_1	0	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAGAAATAATCAGTTCATAA	-28729602	True	NA	NA	False	NA	NA	NA	28741850	28737476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_28738039_28741768
transcript_94814.known	chr22	-	1844	15	FSM	ENSG00000183765.23	ENST00000404276.6	1844	15	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_7	151.032500894776	1402	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729572	True	NA	-18	True	ATTAAA	-18	NA	28741820	28687742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_94815.known	chr22	-	1771	14	FSM	ENSG00000183765.23	ENST00000348295.7	1771	14	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_5	258.892269294762	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28729586	True	NA	-18	True	ATTAAA	-18	NA	28741834	28687742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28734402_28734728_28741768
transcript_94816.known	chr22	-	1971	16	FSM	ENSG00000183765.23	ENST00000382580.6	1971	16	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_13	298.652946113415	90	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAACCTGATGGAACCTGG	-28729590	True	NA	-38	True	NA	NA	NA	28741838	28687762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730419_28730549_28734402_28734728_28741768
transcript_94817.known	chr22	-	514	2	FSM	ENSG00000183765.23	ENST00000472807.1	514	2	0	0	0	0	multi-exon	FALSE	canonical	3	1187	junction_1	0	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGGGCTTTGTGCTTCTG	-28689397	False	NA	-24	True	ATTAAA	-12	NA	28689410	28687748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134
transcript_94818.known	chr22	-	906	7	FSM	ENSG00000183765.23	ENST00000439200.5	906	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	324.801178500872	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAAGTACCAATAAAAGGCT	-28729535	True	NA	NA	False	NA	NA	NA	28741783	28711908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28712018_28719394_28719486_28724976_28725125_28725242_28725368_28730455_28730549_28734402_28734728_28741768
transcript_94819.known	chr22	+	1048	6	FSM	ENSG00000100209.11	ENST00000450178.5	1048	6	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_2	49.1503814837688	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTTGTATATTTCTTTTCT	28739576	True	NA	6	True	AATAAA	-17	NA	28742041	28757510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28742332_28743881_28743924_28744614_28744705_28745863_28746009_28751240_28751289_28757077
transcript_9482.known	chr1	-	277	3	FSM	ENSG00000272419.6	ENST00000418192.2	277	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	2	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCAGAACAACCTGAAGTT	-145215620	False	NA	NA	False	AATAAA	-38	NA	145215746	145201187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145201302_145214676_145214732_145215638
transcript_94820.known	chr22	-	1591	13	FSM	ENSG00000183765.23	ENST00000402731.6	1591	13	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_10	352.576577576497	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGCTTCTGCTTGAT	-28734716	False	12248	-18	True	ATTAAA	-18	NA	28734727	28687742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28687987_28689134_28689216_28694031_28694118_28695126_28695243_28695709_28695874_28696900_28696988_28699837_28699938_28703504_28703567_28710005_28710060_28711908_28712018_28724885_28724924_28725242_28725368_28734402
transcript_94822.known	chr22	-	1794	6	NNC	ENSG00000100219.17	novel	1131	6	NA	NA	-3	-1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_2	714.933115752795	157	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCATCCTTGTTTGATTTCTT	-28768913	True	NA	-9	True	ATTAAA	-13	NA	28800572	28794559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_28795733_28796046_28796124_28796149_28796193_28797076_28797206_28799056_28799154_28800297
transcript_94823.known	chr22	-	1690	5	FSM	ENSG00000100219.17	ENST00000405219.7	1690	5	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_4	766.428894288309	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTACCCATGCAATTAAAAGG	-28768474	False	NA	-38	True	TTTAAA	-2	NA	28800133	28794588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28799959
transcript_94824.known	chr22	-	1850	5	FSM	ENSG00000100219.17	ENST00000216037.10	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	1709	junction_1	52.3187346941801	298	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTTTGATTTCTTCTAGG	-28768938	True	NA	-4	True	ATTAAA	-18	NA	28800597	28794554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_28795733_28796046_28796193_28797076_28797206_28799056_28799154_28800297
transcript_9483.nnic	chr1	-	1086	2	NIC	ENSG00000272419.6	novel	1015	3	NA	NA	-122	4	combination_of_known_splicesites	FALSE	canonical	1	4	junction_1	0	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	NA	False	NA	NA	False	AATAAA	-23	NA	145216180	145164094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145164639_145215638
transcript_94830.known	chr22	+	505	4	FSM	ENSG00000226471.7	ENST00000458080.1	505	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.24933858267454	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGACCATCACAAACACATGC	28800382	True	NA	NA	False	ATTAAA	-22	NA	28800682	28848559	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800738_28821971_28822180_28844126_28844200_28848390
transcript_9484.nic	chr1	-	601	2	ISM	ENSG00000272419.6	ENST00000616993.1	494	3	-18	262	-18	235	5prime_fragment	FALSE	canonical	3	11	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAATTGTGTTCATAATGACA	-145215764	False	NA	NA	False	AATAAA	-17	NA	145215890	145200952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_145201302_145215638
transcript_94840.nic	chr22	+	1055	3	FSM	ENSG00000226471.7	ENST00000687270.1	1018	3	-27	-10	-22	10	multi-exon	FALSE	canonical	2	10	junction_1	1	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTCTGTCATTTTTTCCC	28800360	True	NA	20	True	AATAAA	-31	NA	28800660	28844896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800738_28821971_28822180_28844126
transcript_94842.nnic	chr22	+	448	3	NIC	ENSG00000226471.7	novel	505	4	NA	NA	-22	-6	combination_of_known_splicesites	FALSE	canonical	2	4	junction_2	3	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTCCATGACCATCACAAAC	28800360	True	NA	NA	False	ATTAAA	-16	NA	28800660	28848553	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_28800738_28821971_28822180_28848390
transcript_94845.nnic	chr22	+	439	3	NNC	ENSG00000226471.7	novel	307	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	0.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTGCATAGTCCCTTG	28800382	True	NA	NA	False	ATTAAA	-19	NA	28800682	28822215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_28800738_28803927_28804068_28821971
transcript_94846.nic	chr22	+	321	2	FSM	ENSG00000226471.7	ENST00000692644.1	307	2	-22	8	-22	0	multi-exon	FALSE	canonical	3	10	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACCTTGCATAGTCCCTTG	28800360	True	NA	NA	False	ATTAAA	-19	NA	28800660	28822215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800738_28821971
transcript_94847.known	chr22	+	516	1	FSM	ENSG00000226471.7	ENST00000585003.1	516	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	24	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTAGTTTTTCGTTCCATT	28800408	True	NA	NA	False	AATAAA	-41	NA	28800708	28801224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_28800700_28801200
transcript_94848.known	chr22	+	2128	15	FSM	ENSG00000186998.16	ENST00000334018.11	2128	15	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_14	6.04954037721133	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGTCTCAGTGTGTGCT	29205500	True	NA	12	True	AATAAA	-23	NA	29205895	29259597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29206140_29214925_29215040_29215526_29215631_29225132_29225217_29226489_29226552_29231019_29231141_29231592_29231683_29232255_29232403_29233378_29233469_29233613_29233667_29234136_29234200_29234304_29234350_29243444_29243490_29254202_29254288_29258816
transcript_9485.known	chr1	-	143	2	FSM	ENSG00000272419.6	ENST00000638217.1	143	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATGGGTGTAGAGTT	-145215600	False	NA	NA	False	NA	NA	NA	145215726	145214676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145214732_145215638
transcript_94859.known	chr22	+	2400	17	FSM	ENSG00000182944.18	ENST00000397938.7	2400	17	0	0	0	0	multi-exon	FALSE	canonical	3	1422	junction_8	853.642526178259	3083	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCATCCTTCTCGGCCTCTG	29216194	True	NA	51	True	AATAAA	-21	NA	29268267	29300521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_9486.known	chr1	-	381	2	FSM	ENSG00000236140.1	ENST00000427732.1	381	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTGGCGCTACTATTTTAT	NA	False	NA	NA	False	AATAAA	-31	NA	145287755	145286609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145286871_145287635
transcript_94868.known	chr22	+	2207	17	FSM	ENSG00000182944.18	ENST00000406548.5	2207	17	0	0	0	0	multi-exon	FALSE	canonical	3	2001	junction_8	749.160277306365	2325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	29216199	True	NA	10	True	ATTAAA	-16	NA	29268272	29300336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29291564_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_9487.known	chr1	-	164	1	FSM	ENSG00000270722.1	ENST00000605806.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	10	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	-145464491	True	NA	NA	False	NA	NA	NA	145465780	145465616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145465600_145465800
transcript_94892.known	chr22	+	2267	15	FSM	ENSG00000182944.18	ENST00000331029.11	2267	15	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_8	1200.5525343587	2098	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	29216217	True	NA	55	True	AATAAA	-25	NA	29268290	29300525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288756_29292499_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_94895.known	chr22	+	2446	15	FSM	ENSG00000182944.18	ENST00000629659.2	2446	15	0	0	0	0	multi-exon	FALSE	canonical	2	29	junction_7	1520.85758735669	2166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATCCTTCTCGGCCTCTGTTC	29267989	False	NA	54	True	AATAAA	-24	NA	29268008	29300524	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273737_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_94901.known	chr22	+	1265	9	FSM	ENSG00000182944.18	ENST00000333395.10	1265	9	0	0	0	0	multi-exon	FALSE	canonical	1	6	junction_8	1547.72106155308	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGAGAGAACATTTTATGGT	29216244	True	NA	NA	False	ATTAAA	-22	NA	29268317	29290684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605_29288787_29290412
transcript_94903.known	chr22	+	3231	8	FSM	ENSG00000182944.18	ENST00000483415.5	3231	8	0	0	0	0	multi-exon	FALSE	canonical	3	3655	junction_7	516.047854132833	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGATGTATGGCTTTATGCTG	29216239	True	NA	NA	False	NA	NA	NA	29268312	29291019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29282389_29282558_29286922_29287135_29288605
transcript_94917.known	chr22	+	560	5	FSM	ENSG00000182944.18	ENST00000444626.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	3	413	junction_2	1876.78987902216	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAACTGCCCCCCAGGCATAC	29267989	False	NA	NA	False	NA	NA	NA	29268008	29278041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272385_29272432_29273740_29273865_29278029
transcript_94922.known	chr22	-	1777	7	FSM	ENSG00000100263.14	ENST00000216085.12	1777	7	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_4	83.9576612876329	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTGGACCTCCTTGGAGGCA	-29260747	True	NA	-22	True	AATAAA	-19	NA	29267981	29259871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29260238_29260325_29260614_29260701_29260865_29263834_29264219_29265478_29265669_29267425_29267578_29267747
transcript_94923.known	chr22	-	999	3	FSM	ENSG00000100263.14	ENST00000493894.1	999	3	0	0	0	0	multi-exon	FALSE	canonical	3	417	junction_2	1.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCCGAGGCGGGCGGATCA	-29260726	True	NA	NA	False	NA	NA	NA	29267960	29265034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29265669_29267425_29267578_29267747
transcript_94924.known	chr22	+	1989	16	FSM	ENSG00000182944.18	ENST00000332035.10	1989	16	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_5	1290.53755208182	1706	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGCGGAGTTTTTTTTTC	29216252	True	NA	10	True	ATTAAA	-16	NA	29268325	29300336	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29268350_29272215_29272253_29272379_29272432_29273740_29273865_29278029_29278217_29286922_29287135_29288605_29288787_29291561_29291600_29292136_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299233_29299332_29299598_29299852_29300121
transcript_94925.known	chr22	+	1289	8	FSM	ENSG00000182944.18	ENST00000360091.3	1289	8	0	0	0	0	multi-exon	FALSE	canonical	3	203	junction_5	1805.89411401123	3261	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTCTCGGCCTCTGTTCC	29292136	True	NA	55	True	AATAAA	-25	NA	29292158	29300525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29292170_29292487_29292607_29296238_29296369_29297826_29297950_29298732_29298896_29299194_29299281_29299598_29299852_29300121
transcript_94928.known	chr22	-	4146	21	FSM	ENSG00000100280.17	ENST00000432560.6	4146	21	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_9	33.8116474014503	136	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTGTGTCCCCAGCCAGTG	-29381396	True	NA	-3	True	AATAAA	-13	NA	29388583	29327681	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29328896_29330377_29330533_29330622_29330710_29331448_29331534_29331786_29331917_29334264_29334411_29338989_29339134_29340655_29340858_29341500_29341761_29342284_29342384_29349217_29349384_29350034_29350151_29351170_29351267_29351704_29351826_29354649_29354872_29356425_29356617_29358725_29358972_29359823_29359960_29363000_29363107_29367206_29367271_29388423
transcript_94935.known	chr22	+	3795	4	FSM	ENSG00000100285.10	ENST00000310624.7	3795	4	0	0	0	0	multi-exon	TRUE	canonical	3	29	junction_3	3.74165738677394	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCTCGTGGGTCTAGAGCG	29480135	True	NA	NA	False	NA	NA	NA	29480217	29491390	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29481146_29483374_29483575_29485722_29485848_29488848
transcript_94937.known	chr22	-	2676	21	FSM	ENSG00000100296.14	ENST00000397872.5	2676	21	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_20	62.3869176991459	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553447
transcript_94938.known	chr22	-	2374	21	FSM	ENSG00000100296.14	ENST00000397873.6	2374	21	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_20	65.2869818570287	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACACCAGCCAATTAAAAAGC	-29553748	False	NA	-52	True	NA	NA	NA	29553766	29508357	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29550727_29550844_29553670
transcript_94942.known	chr22	-	2560	20	FSM	ENSG00000100296.14	ENST00000397871.5	2560	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTCTTGTCTACGCACACC	-29547993	True	NA	-2	True	AATAAA	-42	NA	29553655	29508167	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553447
transcript_94943.known	chr22	-	4728	20	FSM	ENSG00000100296.14	ENST00000490103.6	4728	20	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_19	47.0848823889843	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGATGTAG	-29548095	True	NA	NA	False	NA	NA	NA	29553757	29505878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29508521_29511105_29511297_29512020_29512137_29517028_29517117_29517262_29517367_29519005_29519121_29520007_29520105_29520997_29521100_29525837_29525947_29528077_29528178_29528425_29528467_29529161_29529240_29531830_29531964_29536623_29536739_29539329_29539477_29542858_29542957_29543428_29543543_29544459_29544604_29549051_29549159_29553670
transcript_94958.known	chr22	-	441	2	FSM	ENSG00000184117.12	ENST00000494966.1	441	2	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTTGTTGAGGATTAAAGAT	-29565228	False	NA	NA	False	NA	NA	NA	29581026	29579756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29580156_29580984
transcript_94960.known	chr22	-	2013	10	FSM	ENSG00000184117.12	ENST00000216121.12	2013	10	0	0	0	0	multi-exon	FALSE	canonical	3	1906	junction_4	181.135921954267	2164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGTGTCTTTTCTTCATCT	-29565315	True	NA	NA	False	ATTAAA	-14	NA	29581113	29554807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29556000_29558869_29558954_29560733_29560829_29561170_29561203_29561505_29561647_29561791_29561863_29569192_29569288_29570161_29570208_29570404_29570533_29580984
transcript_94968.nnic	chr22	-	1064	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_6	76.3100401141437	164	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765718	True	NA	-23	True	TATAAA	-18	NA	29767011	29730955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766871
transcript_94969.nnic	chr22	-	1029	7	NNC	ENSG00000100319.13	novel	945	6	NA	NA	-42	0	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_6	76.3100401141437	167	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765760	True	NA	-23	True	TATAAA	-18	NA	29767053	29730955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29754748_29754864_29766948
transcript_9497.known	chr1	+	1644	15	FSM	ENSG00000117262.19	ENST00000534502.5	1644	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	81.6008203240079	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCGTCAGGTGATACTATGAC	145604787	True	NA	NA	False	NA	NA	NA	145608047	145670184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145608176_145612201_145612248_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_94974.known	chr22	-	945	6	FSM	ENSG00000100319.13	ENST00000344318.4	945	6	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_5	41.5567082430743	576	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	-29765714	True	NA	-23	True	TATAAA	-18	NA	29767007	29730955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766871
transcript_94975.nic	chr22	-	934	6	NIC	ENSG00000100319.13	novel	945	6	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	3	50	junction_5	49.5314041795708	536	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGGTCTGGCTGTGTTTCCC	NA	False	NA	-23	True	TATAAA	-18	NA	29767073	29730955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_29731355_29738329_29738442_29740649_29740731_29742417_29742481_29748417_29748572_29766948
transcript_9498.known	chr1	+	1955	14	FSM	ENSG00000117262.19	ENST00000460277.5	1955	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	57.8413459540418	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTTTTGCCTTACGTTCATT	145604729	True	NA	NA	False	ATTAAA	-16	NA	145607989	145670463	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623592_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_94983.known	chr22	+	584	2	FSM	ENSG00000184076.13	ENST00000401406.3	584	2	0	0	0	0	multi-exon	FALSE	canonical	3	1120	junction_1	0	2856	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAACACCCCAAAGGCAGAAT	29712830	True	NA	100	True	NA	NA	NA	29767373	29770027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29767608_29769677
transcript_94985.known	chr22	+	916	2	FSM	ENSG00000184076.13	ENST00000330029.6	916	2	0	0	0	0	multi-exon	FALSE	canonical	3	10139	junction_1	0	16511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTGGGCCTCATTCAAAG	29712825	True	NA	3	True	AATAAA	-14	NA	29767368	29770413	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_29767549_29769677
transcript_94988.known	chr22	-	2823	21	FSM	ENSG00000100325.15	ENST00000397771.6	2823	21	0	0	0	0	multi-exon	FALSE	canonical	3	107	junction_19	70.0969863831534	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCCTGCTAATAAAATTTTTG	-29835459	True	NA	-49	True	AAAAAG	-1	NA	29838276	29788641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29834488_29834551_29838177
transcript_94989.known	chr22	-	2790	20	FSM	ENSG00000100325.15	ENST00000307790.8	2790	20	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_19	51.9259540994797	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CGATCTGTGTATGTCCATGA	-29835457	True	NA	-18	True	AATAAA	-19	NA	29838274	29788610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822465_29825086_29825258_29825621_29825781_29832244_29832343_29838177
transcript_95.known	SIRV1	-	1561	6	FSM	SIRV1A	SIRV101	1561	6	0	0	0	0	multi-exon	FALSE	canonical	3	1688	junction_5	2318.84911108938	4554	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATCGATGCATACTTCCTT	NA	False	NA	NA	False	NA	NA	NA	10786	1000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_SIRV1_-_1485_6337_6474_6560_6814_7552_7815_10282_10367_10444
transcript_9500.known	chr1	+	2124	14	FSM	ENSG00000117262.19	ENST00000313835.14	2124	14	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_1	18.1346051880223	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTCAGGTATGTCATTTT	145604727	True	NA	20	True	AATAGA	-16	NA	145607987	145670650	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663_145631745_145643868_145643979_145646183_145646273_145647174_145647268_145663328_145663425_145665561_145665652_145669624_145669691_145669833
transcript_95000.known	chr22	-	562	2	FSM	ENSG00000100325.15	ENST00000492821.1	562	2	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTTTTTGTGAGCATTAAT	-29835457	True	NA	NA	False	GATAAA	-28	NA	29838274	29834085	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29834551_29838177
transcript_95002.known	chr22	-	2594	19	FSM	ENSG00000100325.15	ENST00000542393.5	2594	19	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_16	113.256836928775	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATCTGTGTATGTCCATGACC	-29835487	True	NA	-16	True	AATAAA	-21	NA	29838304	29788608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_29789185_29790468_29790549_29792432_29792536_29793359_29793491_29793576_29793677_29800990_29801111_29801993_29802209_29804637_29804831_29806215_29806291_29806484_29806554_29806796_29806905_29808110_29808186_29813429_29813543_29814656_29814768_29816005_29816074_29822334_29822396_29825086_29825258_29832244_29832343_29838177
transcript_95003.nic	chr22	+	1024	8	ISM	ENSG00000100330.16	ENST00000351488.7	4464	19	-39	27494	0	7332	5prime_fragment	FALSE	canonical	3	52	junction_5	11.0157586563754	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTATTGAATCTTCTGTTCC	29880778	True	NA	NA	False	ATTAAA	-25	NA	29883173	29999001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_29883360_29957035_29957089_29970975_29971063_29978441_29978532_29978935_29979053_29988479_29988563_29991503_29991671_29998760
transcript_95005.nic	chr22	+	359	3	ISM	ENSG00000100330.16	ENST00000495098.5	461	5	-5	7873	0	-7873	5prime_fragment	FALSE	canonical	3	71	junction_2	8	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAAAAACCCTGTGTCCTGA	29880778	True	NA	NA	False	AGTAAA	-9	NA	29883173	29971095	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_29883360_29957035_29957089_29970975
transcript_95007.known	chr22	-	902	5	FSM	ENSG00000227117.6	ENST00000429350.5	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	1.58113883008419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	-30080133	True	NA	NA	False	AATAAA	-27	NA	30080230	30008741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30009197_30018616_30018730_30040176_30040279_30050460_30050590_30080127
transcript_95010.nic	chr22	-	862	4	NIC	ENSG00000227117.6	novel	902	5	NA	NA	-62	0	combination_of_known_junctions	FALSE	canonical	2	3	junction_2	2.05480466765633	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTTCGATCTCACTCTGGC	-30080195	True	NA	NA	False	AATAAA	-27	NA	30080292	30008741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_30009197_30018616_30018730_30050460_30050590_30080127
transcript_95011.nnic	chr22	-	864	4	NIC	ENSG00000227117.6	novel	902	5	NA	NA	-79	-4	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.55902608401044	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTACTTCGATCTCACTC	NA	False	NA	NA	False	AATAAA	-23	NA	30080309	30008745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_30009197_30040176_30040279_30050460_30050590_30080127
transcript_95014.known	chr22	+	429	4	FSM	ENSG00000176635.18	ENST00000491605.1	429	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.816496580927726	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCTTTATTGTCCTGTTGT	NA	False	NA	NA	False	CATAAA	-17	NA	30093957	30104577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30094004_30098851_30098994_30103436_30103501_30104400
transcript_95018.known	chr22	-	1501	9	FSM	ENSG00000239282.8	ENST00000407689.8	1501	9	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_6	13.6633634219397	864	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTGGGCTACGGTCCTT	-30288357	True	NA	-2	True	AATAAA	-16	NA	30289505	30285116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286262_30286377_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_95020.known	chr22	-	1972	9	FSM	ENSG00000099992.16	ENST00000215790.12	1972	9	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	9.49670995661129	33	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCGTGTACAGCTAGGGGC	-30326279	True	NA	1	True	AATAAA	-17	NA	30326941	30291989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30292852_30293650_30293806_30293920_30294111_30294795_30294862_30294940_30295056_30295736_30295844_30299443_30299552_30304530_30304631_30326672
transcript_95022.known	chr22	-	1460	8	FSM	ENSG00000239282.8	ENST00000404953.7	1460	8	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	38.1677286487431	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTTGTTAATAAAGGACTT	-30288459	True	NA	-31	True	NA	NA	NA	30289607	30285145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30285689_30285831_30285927_30286015_30286099_30286824_30286949_30287154_30287288_30287372_30287561_30288705_30288777_30289384
transcript_95029.known	chr22	+	4207	12	FSM	ENSG00000100003.18	ENST00000615189.5	4207	12	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	5.44544695704434	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCTCGGAACCATCCTAGGG	30396796	True	NA	NA	False	AATAAA	-29	NA	30397017	30425303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30407094_30407155_30407414_30407604_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_95036.known	chr22	+	1229	10	FSM	ENSG00000100003.18	ENST00000402592.7	1229	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	4.58122847290851	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCCAGGAGCTGGCTGGCCA	30396823	True	NA	NA	False	NA	NA	NA	30397044	30422601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30397171_30399642_30399719_30406341_30406386_30409186_30409283_30409425_30409487_30410595_30410680_30415758_30415866_30415947_30416088_30416233_30416404_30422276
transcript_95038.known	chr22	-	2011	9	FSM	ENSG00000099999.15	ENST00000382363.8	2011	9	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_7	6.55624702097168	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGTAAAATGTGTATAGGT	-30386708	True	NA	-13	True	AATAAA	-22	NA	30387411	30378820	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30379623_30379710_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
transcript_95041.known	chr22	-	1651	8	FSM	ENSG00000099999.15	ENST00000215798.10	1651	8	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_6	6.63017222049845	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTGGCTGCGGCTTTGTG	-30386422	False	703	NA	False	NA	NA	NA	30387125	30378982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30379814_30380061_30380206_30380281_30380402_30384338_30384496_30385903_30385990_30386069_30386142_30386615_30386760_30387028
transcript_95048.known	chr22	+	1759	3	FSM	ENSG00000187860.11	ENST00000399824.6	1759	3	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	2.5	72	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCTTGGCACGGTGGCTG	30356328	True	NA	NA	False	AATAAA	-17	NA	30356634	30367096	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30357133_30361960_30362115_30365989
transcript_95053.known	chr22	-	5090	16	FSM	ENSG00000099995.19	ENST00000215793.13	5090	16	0	0	0	0	multi-exon	FALSE	canonical	3	424	junction_4	123.277464823598	254	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTATGATCATTAACTCT	-30342974	True	NA	-13	True	AATAAA	-21	NA	30356894	30331987	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30334696_30335466_30335539_30335651_30335754_30337025_30337181_30337689_30337898_30338788_30339035_30339129_30339252_30340195_30340382_30340694_30340813_30341691_30341886_30342199_30342351_30342804_30342880_30344932_30345191_30346311_30346520_30352950_30353073_30356729
transcript_95054.known	chr22	+	1133	4	FSM	ENSG00000242114.6	ENST00000266263.10	1133	4	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	84.9365776460426	2726	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTATGTCTTCATTTCTGTT	30416561	True	NA	33	True	AATAAA	-14	NA	30425767	30429054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30425947_30426716_30426845_30427170_30427404_30428461
transcript_95055.known	chr22	+	891	3	FSM	ENSG00000242114.6	ENST00000355143.8	891	3	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_2	408.5	582	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTATGTCTTCATTTCTGT	30416569	True	NA	32	True	AATAAA	-13	NA	30425775	30429053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30425947_30426716_30426845_30428461
transcript_95057.known	chr22	-	2510	12	FSM	ENSG00000133488.15	ENST00000255858.12	2510	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	2.55840859626733	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAAAATGGCTGCG	-30505510	True	NA	NA	False	NA	NA	NA	30505695	30488901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30490247_30491572_30491743_30491833_30491974_30492048_30492156_30492473_30492558_30494149_30494211_30494865_30494962_30495253_30495443_30495582_30495643_30495927_30495972_30503676_30503753_30505557
transcript_95058.known	chr22	-	1635	3	FSM	ENSG00000128242.13	ENST00000406955.5	1635	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	42.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-30560482	False	294	-2	True	AGTAAA	-27	NA	30560776	30554634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30556094_30557261_30557402_30560740
transcript_95059.known	chr22	-	1908	3	FSM	ENSG00000128242.13	ENST00000402321.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	38.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGCCTCAGTGGTGGTGAC	-30564774	False	NA	-2	True	AGTAAA	-27	NA	30565133	30554634	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30556094_30557261_30557402_30564824
transcript_95061.known	chr22	-	1791	4	FSM	ENSG00000128242.13	ENST00000401975.5	1791	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	41.2660743091573	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCAGCCTCAGTGGTGGTG	-30564530	False	359	-4	True	AGTAAA	-25	NA	30564889	30554636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30556094_30557261_30557402_30558259_30558389_30564824
transcript_95063.known	chr22	-	1988	15	FSM	ENSG00000100029.18	ENST00000335214.8	1988	15	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	185.754226474288	817	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCTCTGTGCCCAGCCTGAT	-30581654	True	NA	NA	False	NA	NA	NA	30591858	30576834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580687_30581011_30581102_30581333_30581409_30581527_30581645_30584364_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_95065.known	chr22	-	2144	15	FSM	ENSG00000100029.18	ENST00000402284.7	2144	15	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_9	204.106564803581	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCATTTGTTATTAAATGACT	-30581676	True	NA	-41	True	NA	NA	NA	30591880	30576664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30577130_30578836_30578999_30579136_30579304_30579750_30579936_30580052_30580179_30580570_30580702_30581011_30581102_30581333_30581409_30581527_30581645_30584415_30584455_30584545_30584718_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_95081.known	chr22	+	1870	9	FSM	ENSG00000185339.9	ENST00000407817.3	1870	9	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	103.921845634111	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACAGTGGCCTGGTGCCTCA	30604483	True	NA	24	True	ATTAAA	-24	NA	30607203	30627060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30612962_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_95083.known	chr22	+	2192	9	FSM	ENSG00000185339.9	ENST00000215838.8	2192	9	0	0	0	0	multi-exon	TRUE	canonical	3	298	junction_7	28.3989436423259	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGTGAGGTTGTTGATATT	30604453	True	NA	20	True	NA	NA	NA	30607173	30627271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30607396_30610870_30611064_30612872_30613043_30614348_30614502_30615300_30615474_30615600_30615788_30617329_30617496_30622967_30623084_30626459
transcript_9509.nic	chr1	+	779	7	ISM	ENSG00000117262.19	ENST00000313835.14	2124	14	-17	38907	-17	8029	5prime_fragment	FALSE	canonical	3	199	junction_1	19.9387952383176	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGTAAGATATCAACACTGTA	145604710	True	NA	NA	False	AAAAAG	-5	NA	145607970	145631743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_145608176_145616233_145616294_145618319_145618424_145623053_145623161_145623612_145623715_145630686_145630808_145631663
transcript_95097.nnic	chr22	-	635	4	NNC	ENSG00000100029.18	novel	2265	15	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	397.705362744275	176	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGCATTTTGTGTCCATGAG	-30581725	True	NA	-6	True	ATTAAA	-21	NA	30591929	30576629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_30576957_30588066_30588175_30589190_30589271_30591809
transcript_95098.known	chr22	-	713	4	FSM	ENSG00000100029.18	ENST00000466614.1	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	824	junction_1	12.0277457017791	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAGGGCTCCATGAAGGCAC	-30581686	True	NA	NA	False	NA	NA	NA	30591890	30586997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30587396_30588020_30588175_30589190_30589271_30591809
transcript_95099.known	chr22	-	490	3	FSM	ENSG00000100029.18	ENST00000467368.1	490	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TGAGAAGAATGAATATAACA	-30606797	False	NA	NA	False	AATAAA	-22	NA	30606869	30603777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30604103_30605413_30605518_30606808
transcript_95100.known	chr22	-	630	3	FSM	ENSG00000100029.18	ENST00000492986.1	630	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.5	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CATGAGAAGAATGAATATAA	-30606986	True	NA	NA	False	AATAAA	-20	NA	30607058	30603779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30604103_30605460_30605518_30606808
transcript_95101.known	chr22	+	637	2	FSM	ENSG00000185339.9	ENST00000423350.1	637	2	0	0	0	0	multi-exon	FALSE	canonical	3	328	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAACTTGGGTACTAGTTTG	30606825	False	NA	NA	False	NA	NA	NA	30607002	30611114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30607396_30610870
transcript_95102.known	chr22	-	560	5	FSM	ENSG00000100029.18	ENST00000433575.5	560	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	361.715616887079	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGAGGCATGGAAGACATAAC	-30581674	True	NA	NA	False	NA	NA	NA	30591878	30585223	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30585371_30587285_30587396_30588020_30588175_30589190_30589271_30591809
transcript_95105.known	chr22	-	1157	3	FSM	ENSG00000167065.14	ENST00000342474.4	1157	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGCACATGGTCAGTTCCCC	-30667593	True	NA	NA	False	NA	NA	NA	30667885	30663514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30664081_30664954_30665122_30667461
transcript_95106.known	chr22	-	3050	2	FSM	ENSG00000167065.14	ENST00000334679.4	3050	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	GAAAAAGAAAAGAAAAAAAG	-30667583	True	NA	NA	False	AAAAAG	-16	NA	30667875	30661444	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30664081_30667461
transcript_95108.known	chr22	-	5657	26	FSM	ENSG00000133422.14	ENST00000397641.8	5657	26	0	0	0	0	multi-exon	FALSE	canonical	3	267	junction_13	24.6253203024854	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCAGTCTGTTTTCTTAGTA	-30968753	False	57	0	True	TATAAA	-24	NA	30968774	30925129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30926872_30928018_30928208_30932358_30932453_30932544_30932770_30932888_30933031_30933465_30933521_30934059_30934192_30934780_30935162_30935247_30935323_30936510_30936644_30936931_30937038_30937582_30937712_30937814_30937970_30938064_30938206_30939620_30939707_30939958_30940042_30940757_30940838_30941432_30941559_30941890_30942003_30942111_30942272_30946340_30946450_30949751_30949843_30950376_30950446_30956762_30956798_30958640_30958695_30967821
transcript_95109.known	chr22	-	462	2	FSM	ENSG00000133422.14	ENST00000429468.5	462	2	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTGTGCCTGTGAGACC	-30928210	False	NA	-15	True	TATAAA	-20	NA	30928228	30926610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_30926872_30928027
transcript_95110.known	chr22	+	1817	4	FSM	ENSG00000253352.10	ENST00000602971.2	1817	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	42.3425186885344	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTAACTACTGTTTCCAAG	30965088	True	NA	15	True	NA	NA	NA	30969294	30976022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30969387_30972047_30972173_30972854_30973602_30975169
transcript_95112.known	chr22	+	4449	3	FSM	ENSG00000253352.10	ENST00000643920.1	4449	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	45	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTTTTTGCTTAAGTTACT	30965071	True	NA	4	True	AATAAA	-4	NA	30969277	30978831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_30969387_30972923_30973602_30975169
transcript_95113.known	chr22	+	3296	21	FSM	ENSG00000183963.19	ENST00000333137.12	3296	21	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_7	17.3637553541853	158	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31080076	True	NA	21	True	GATAAA	-18	NA	31081317	31104624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31100884_31101050_31104315
transcript_95114.known	chr22	+	3130	20	FSM	ENSG00000183963.19	ENST00000347557.6	3130	20	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_19	16.4503786718955	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31080077	True	NA	21	True	GATAAA	-18	NA	31081318	31104624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31081457_31083178_31083310_31087964_31088114_31088512_31088607_31088698_31088778_31088871_31088970_31089698_31090020_31090107_31090181_31090807_31090880_31090960_31091483_31091674_31091848_31095302_31095456_31095533_31095610_31096732_31096898_31096997_31097061_31097268_31097339_31098666_31098841_31099061_31099180_31099744_31099897_31104315
transcript_95118.nnic	chr22	+	976	4	NNC	ENSG00000183963.19	novel	1263	9	NA	NA	-741	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	41.6119640915393	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31098909	False	NA	21	True	GATAAA	-18	NA	31098920	31104624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_31099180_31099653_31099897_31100884_31101050_31104315
transcript_95122.nnic	chr22	+	811	3	NNC	ENSG00000183963.19	novel	1263	9	NA	NA	-741	0	at_least_one_novel_splicesite	FALSE	canonical	1	3	junction_1	16.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGACTCCTCTCTGCGTC	31098909	False	NA	21	True	GATAAA	-18	NA	31098920	31104624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_31099180_31099653_31099897_31104315
transcript_95128.known	chr22	-	694	5	FSM	ENSG00000198832.11	ENST00000400299.6	694	5	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_4	10.917302780449	1474	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGGCTCGACTCCTTCGT	-31104306	True	NA	-5	True	ACTAAA	-17	NA	31107568	31104776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31105966_31107376
transcript_95129.known	chr22	-	500	5	FSM	ENSG00000198832.11	ENST00000460642.5	500	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	123.878973195615	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGTGGGCGCCCGCGAAGC	-31104279	True	NA	NA	False	NA	NA	NA	31107541	31105024	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106047_31107376
transcript_9513.nic	chr1	+	1262	3	ISM	ENSG00000117262.19	ENST00000532574.5	492	4	-48	3908	-17	965	5prime_fragment	FALSE	canonical	3	199	junction_1	8.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGAGAGAGGGGCCAGACA	145604710	True	NA	NA	False	AAAACA	-24	NA	145607970	145619316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_145608176_145616233_145616294_145618319
transcript_95130.known	chr22	-	605	5	FSM	ENSG00000198832.11	ENST00000491958.5	605	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_4	115.243221058768	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGAAACTTCGGACCACG	-31104291	True	NA	NA	False	NA	NA	NA	31107553	31105000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106116_31107376
transcript_95131.known	chr22	-	703	5	FSM	ENSG00000198832.11	ENST00000465536.5	703	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	123.878973195615	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGACAGAATGAAGCGCTCA	-31104266	True	NA	NA	False	NA	NA	NA	31107528	31104925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105129_31105207_31105287_31105657_31105693_31105929_31106164_31107376
transcript_95135.known	chr22	-	334	4	FSM	ENSG00000198832.11	ENST00000469262.1	334	4	0	0	0	0	multi-exon	FALSE	canonical	3	271	junction_3	12.3558353285671	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGACCCGCGAAGAGAT	-31104204	False	NA	NA	False	NA	NA	NA	31107466	31105113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31105287_31105657_31105693_31105929_31105966_31107376
transcript_95138.known	chr22	+	380	1	FSM	ENSG00000235573.2	ENST00000420779.2	380	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGAGGTAATATGCATTTGCA	31113006	False	NA	NA	False	AAAACA	-35	NA	31113016	31113396	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31113000_31113400
transcript_95139.known	chr22	+	2393	14	FSM	ENSG00000185133.14	ENST00000400294.6	2393	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	18.4580124837988	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	31122481	True	NA	13	True	ATTAAA	-13	NA	31122993	31134696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31123120_31124844_31124907_31125832_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_9514.nic	chr1	+	1900	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-33	0	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	145824031	False	NA	11	True	AATAAA	-21	NA	145824054	145842493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_95140.known	chr22	+	2215	13	FSM	ENSG00000185133.14	ENST00000404390.7	2215	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	17.9325510981815	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTCTCGGCTCTTTCCTACT	31122481	True	NA	13	True	ATTAAA	-13	NA	31122993	31134696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31123120_31124844_31124907_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_95141.known	chr22	+	3348	13	FSM	ENSG00000185133.14	ENST00000331075.10	3348	13	0	0	0	0	multi-exon	TRUE	canonical	2	13	junction_4	16.5653168464181	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCTCGGCTCTTTCCTACTT	31122453	True	NA	14	True	ATTAAA	-14	NA	31122965	31134697	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31123120_31124844_31126011_31126375_31126490_31126612_31126722_31126920_31127038_31127356_31127533_31127950_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_95144.known	chr22	+	1613	7	FSM	ENSG00000185133.14	ENST00000404453.5	1613	7	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	3.89087250997625	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	31127676	True	NA	-47	True	NA	NA	NA	31127788	31134636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133405_31133484_31133609_31133715_31133912
transcript_95145.known	chr22	+	1564	6	FSM	ENSG00000185133.14	ENST00000402238.5	1564	6	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_4	15.9172862008572	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTCTGGCAGATGTCCCAA	31127641	False	NA	-47	True	NA	NA	NA	31127759	31134636	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31128063_31128213_31128324_31128470_31128655_31133097_31133236_31133609_31133715_31133912
transcript_9515.nic	chr1	+	2044	16	NIC	ENSG00000186141.9	novel	3777	15	NA	NA	-2	263	combination_of_known_junctions	FALSE	canonical	3	58	junction_3	39.7941369215784	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGTCTATGCCTGTTCTTT	145821813	True	NA	14	True	NA	NA	NA	145824173	145842756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145824370_145825756_145825924_145826453_145826493_145826605_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_95150.known	chr22	-	2600	7	FSM	ENSG00000100078.4	ENST00000215885.4	2600	7	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_5	11.1567119807864	55	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACAGCTGGTGCCTGGTAAA	-31139189	True	NA	-7	True	ATTAAA	-22	NA	31140508	31134806	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31135937_31136682_31136800_31136907_31137041_31137709_31137994_31138275_31138411_31138666_31138800_31139840
transcript_95157.known	chr22	+	3182	7	FSM	ENSG00000138942.17	ENST00000326132.11	3182	7	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_3	7.83156008298049	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTGGACTTCTTGTCTGTG	31157784	True	NA	6	True	ATTAAA	-24	NA	31160181	31207019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_95158.nic	chr22	+	2944	6	NIC	ENSG00000138942.17	novel	2737	8	NA	NA	7	0	intron_retention	FALSE	canonical	3	10	junction_1	55.390973993964	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTATGAGCTTGGACTTCTTG	31157792	True	NA	0	True	ATTAAA	-18	NA	31160189	31207013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_31160304_31192683_31192703_31195468_31195582_31196935_31196991_31201497_31201616_31204488
transcript_95159.known	chr22	+	2946	5	FSM	ENSG00000138942.17	ENST00000266252.8	2946	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	63.0530530585157	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTATGAGCTTGGACTTCTT	31157845	True	NA	-1	True	ATTAAA	-17	NA	31160242	31207012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31160304_31187046_31187271_31192683_31192703_31201497_31201616_31204488
transcript_95160.nnic	chr22	+	594	3	NNC	ENSG00000138942.17	novel	563	5	NA	NA	7	-15017	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	8	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGTCTCTAGCAGATCAGG	31157792	True	NA	NA	False	AATAAA	-23	NA	31160189	31182028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_31160304_31176261_31176418_31181704
transcript_95162.nic	chr22	+	2792	16	NIC	ENSG00000182541.18	novel	3667	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_15	46.1059649069402	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGAATGCCTACTGTGTGCT	31207644	True	NA	NA	False	ATTAAA	-19	NA	31212238	31277638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31276788
transcript_95163.known	chr22	+	3667	16	FSM	ENSG00000182541.18	ENST00000331728.9	3667	16	0	0	0	0	multi-exon	FALSE	canonical	3	143	junction_15	25.2222124326951	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATGGAGAGTGAAAACATGA	31207703	True	NA	44	True	AATAAA	-25	NA	31212297	31280080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31212425_31225719_31225820_31258290_31258427_31259120_31259231_31259888_31260078_31262133_31262240_31262594_31262792_31265945_31266133_31266983_31267071_31267775_31267908_31268143_31268201_31271135_31271202_31272529_31272705_31273451_31273508_31275150_31275309_31278296
transcript_95169.known	chr22	-	2420	6	FSM	ENSG00000100100.13	ENST00000215912.10	2420	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3.24961536185438	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTCCACATTGCCAAGTTT	-31292364	True	NA	83	True	ATTAAA	-11	NA	31292488	31281599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31283289_31289314_31289394_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_95171.known	chr22	-	3711	5	FSM	ENSG00000100105.18	ENST00000405309.7	3711	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	162.330488510323	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	-31346188	False	NA	-7	True	ATTAAA	-16	NA	31346232	31325808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31327310_31328786_31328860_31335691_31335864_31342896_31342961_31344331
transcript_95172.known	chr22	-	3895	5	FSM	ENSG00000100105.18	ENST00000266269.10	3895	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	170.426670448026	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGCTCCCTTGAGTCCAGT	-31346302	False	885	-2	True	ATTAAA	-21	NA	31346346	31325803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31327310_31328786_31328925_31335691_31335864_31342896_31342961_31344331
transcript_95174.known	chr22	-	3638	4	FSM	ENSG00000100105.18	ENST00000351933.8	3638	4	0	0	0	0	multi-exon	FALSE	canonical	3	294	junction_2	43.0219582177391	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTATCTGCTCCCTTGAGT	-31346188	False	NA	-7	True	ATTAAA	-16	NA	31346232	31325808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31327310_31335691_31335864_31342896_31342961_31344331
transcript_95175.nnic	chr22	-	1183	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-52	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_2	40	35	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31343293	False	209	-4	True	GATAAA	-17	NA	31343337	31340676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_31341684_31342896_31342961_31343225
transcript_95176.nnic	chr22	-	1153	3	NNC	ENSG00000100105.18	novel	2516	3	NA	NA	-46	0	at_least_one_novel_splicesite	FALSE	canonical	2	8	junction_2	43.5	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31343287	False	209	-4	True	GATAAA	-17	NA	31343331	31340676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_31341684_31342896_31342961_31343249
transcript_95179.known	chr22	-	2516	3	FSM	ENSG00000100105.18	ENST00000215919.3	2516	3	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	147	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGAGGCTTTGTGTGTTTT	-31345732	False	879	-4	True	GATAAA	-17	NA	31345776	31340676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31341684_31342896_31342961_31344331
transcript_95180.known	chr22	-	2374	5	FSM	ENSG00000100100.13	ENST00000441972.5	2374	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.31507290636732	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAAAGACTCCA	NA	False	NA	70	True	NA	NA	NA	31292534	31281612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31283289_31289498_31289700_31290964_31291085_31291179_31291297_31292274
transcript_95185.known	chr22	+	677	3	FSM	ENSG00000185721.13	ENST00000469673.1	677	3	0	0	0	0	multi-exon	FALSE	canonical	3	727	junction_2	23	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAGATCTGGTAGGCTGGTC	31426491	False	NA	2	True	NA	NA	NA	31426512	31434155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31426783_31427059_31427183_31433871
transcript_95186.known	chr22	+	4226	31	FSM	ENSG00000198089.16	ENST00000540643.5	4226	31	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_10	27.312370009861	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTCTCCCACTTTTCATACAA	31496128	False	NA	12	True	ATTAAA	-18	NA	31496138	31618551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31561289_31561393_31573057_31573215_31575230_31575393_31578381_31578453_31583874_31583973_31585067_31585135_31589446_31589578_31602211_31602294_31602606_31602786_31603743_31603820_31604308_31604405_31604868_31604946_31606327_31606431_31607936_31608034_31611142_31611304_31611765_31611841_31613141_31613217_31613353_31613531_31613601_31613856_31614788_31614861_31615047_31615280_31616744_31616878_31616999_31617079_31618114_31618227_31618313
transcript_9519.known	chr1	+	3777	15	FSM	ENSG00000186141.9	ENST00000334163.4	3777	15	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_1	12.7359366217272	205	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTGCATGTTCTGTCTCAC	145821839	True	NA	NA	False	AATAAA	-18	NA	145824199	145844402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145839889_145839992_145840115_145840166_145840921_145841072_145842338
transcript_95194.nnic	chr22	+	947	7	NNC	ENSG00000185721.13	novel	309	3	NA	NA	-11802	26911	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_6	46.2589330712338	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTTGTTTATAAGATCGATTT	31495088	True	NA	NA	False	AATAAA	-14	NA	31496482	31557545	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_31496638_31508254_31508377_31528689_31528864_31546860_31546972_31550253_31550349_31556941_31557060_31557373
transcript_95201.known	chr22	-	3647	19	FSM	ENSG00000184708.18	ENST00000330125.10	3647	19	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	30.5089037803154	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTAACTGACATTGTTGTGTT	-31488256	True	NA	15	True	ATTAAA	-28	NA	31489842	31439366	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31440122_31440703_31440869_31441773_31442119_31442961_31443095_31444605_31444691_31447425_31447566_31448152_31448233_31449347_31449532_31450288_31450361_31454143_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_95204.nic	chr22	-	1724	10	ISM	ENSG00000184708.18	ENST00000330125.10	3647	19	50	14691	32	-9426	5prime_fragment	FALSE	canonical	3	143	junction_1	14.8457085290125	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCTGAGTAAGTTGGAAATT	-31488206	True	NA	NA	False	AATAAA	-19	NA	31489792	31454057	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_31454377_31455135_31455316_31455851_31455988_31458474_31458651_31462931_31463134_31463680_31463968_31468174_31468303_31471843_31471918_31488622_31488746_31489693
transcript_95211.known	chr22	+	873	1	FSM	ENSG00000287817.1	ENST00000665497.1	873	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	14	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTTTTTACAGGCAAGA	31490139	False	NA	9	True	AATAAA	-17	NA	31490149	31491022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31490100_31491000
transcript_95212.known	chr22	+	457	1	FSM	ENSG00000214093.3	ENST00000445477.1	457	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGCAGGCCTTGTCTGTT	NA	False	NA	NA	False	AAGAAA	-4	NA	31559482	31559939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31559500_31559900
transcript_95218.known	chr22	-	1723	8	FSM	ENSG00000241878.12	ENST00000435900.5	1723	8	0	0	0	0	multi-exon	FALSE	canonical	3	54	junction_2	133.697343248984	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAGGACCTGATGAGTGACC	-31658571	True	NA	NA	False	NA	NA	NA	31662180	31618976	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620600_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_95221.nic	chr22	-	2509	8	NIC	ENSG00000241878.12	novel	2669	8	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	10	junction_7	200.362834143766	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31630169	True	NA	0	True	AATAAA	-18	NA	31630862	31618490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31623683_31623850_31625762_31626017_31630803
transcript_95222.known	chr22	-	1963	8	FSM	ENSG00000241878.12	ENST00000439502.7	2358	8	-217	612	-211	-126	multi-exon	FALSE	canonical	3	366	junction_5	31.8331107304252	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCACATTCACCTCATCCTG	NA	False	NA	NA	False	NA	NA	NA	31662432	31619102	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_95227.known	chr22	-	2264	7	FSM	ENSG00000241878.12	ENST00000437808.5	2264	7	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	161.898802411328	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAATCAAACTTAAAA	-31658612	True	NA	-20	True	NA	NA	NA	31662221	31618510	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31662143
transcript_95228.known	chr22	-	2534	7	FSM	ENSG00000241878.12	ENST00000460723.5	2534	7	0	0	0	0	multi-exon	FALSE	canonical	3	366	junction_4	25.7336787541584	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	-31658606	True	NA	0	True	AATAAA	-18	NA	31662215	31618490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31619837_31620552_31620714_31620995_31621143_31621333_31621886_31648100_31648277_31650698_31650779_31662143
transcript_95230.nic	chr22	-	2273	7	NIC	ENSG00000241878.12	novel	2358	8	NA	NA	-70	0	combination_of_known_junctions	FALSE	canonical	3	17	junction_1	154.325413763687	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTTCTGTTCCTGGAGG	NA	False	NA	0	True	AATAAA	-18	NA	31662291	31618490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_31619837_31620995_31621143_31621333_31621473_31621648_31621886_31648100_31648277_31650698_31650779_31662143
transcript_95239.known	chr22	-	718	3	FSM	ENSG00000183530.14	ENST00000461722.1	718	3	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	27.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGATCTGCTGAAAAGACAG	-31743392	True	NA	NA	False	NA	NA	NA	31750072	31716726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31717292_31725537_31725611_31749992
transcript_95242.known	chr22	-	10827	9	FSM	ENSG00000183530.14	ENST00000327423.11	10827	9	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_8	19.8557296516648	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAACTCTCAAGGCCGTTACT	-31743452	True	NA	-8	True	AATAAA	-22	NA	31750132	31681346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_31685804_31688155_31688228_31701655_31701763_31703549_31703722_31704654_31704727_31712082_31717292_31725537_31725611_31738386_31738912_31749992
transcript_95245.nic	chr22	+	972	10	ISM	ENSG00000100150.20	ENST00000400242.8	2448	22	-32	31006	5	197	5prime_fragment	FALSE	canonical	3	71	junction_9	34.5171276146413	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCCGGACTCCAGATTTAAAT	31751391	True	NA	NA	False	ATTAAA	-31	NA	31753986	31784985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906_31783986_31784813
transcript_95246.known	chr22	+	1478	9	FSM	ENSG00000100150.20	ENST00000437411.6	1478	9	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	50.5389701121818	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTTTTTCATTGTTTCTT	31753933	False	NA	6	True	AATAAA	-20	NA	31753943	31784788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31753997_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_95250.known	chr22	+	1278	9	FSM	ENSG00000100150.20	ENST00000645015.1	1278	9	0	0	0	0	multi-exon	FALSE	canonical	3	124	junction_1	20.9250896055429	142	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTAATCCCAGCTACTCAGG	31751432	True	NA	NA	False	AATACA	-30	NA	31754027	31784504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31754165_31754861_31754980_31758545_31758634_31760655_31760703_31764974_31765061_31766584_31766669_31768813_31768864_31778098_31778169_31783906
transcript_95258.known	chr22	+	1751	2	FSM	ENSG00000128245.15	ENST00000248975.6	1751	2	0	0	0	0	multi-exon	FALSE	canonical	3	2063	junction_1	0	397	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31921613	True	NA	38	True	AATAAA	-20	NA	31944534	31957603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31944821_31956138
transcript_95259.known	chr22	+	1735	2	FSM	ENSG00000128245.15	ENST00000471374.1	1735	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTTGGTCTTGATTT	31944953	False	NA	38	True	AATAAA	-20	NA	31944965	31957603	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_31945236_31956138
transcript_95262.known	chr22	+	407	1	FSM	ENSG00000232346.1	ENST00000423610.1	407	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4911	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTTTCTGCAGTGCTGTA	32039221	False	NA	NA	False	NA	NA	NA	32039489	32039896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32039500_32039900
transcript_95263.known	chr22	-	1378	9	FSM	ENSG00000205856.4	ENST00000382097.4	1378	9	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.98956518577535	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTACTTGCCCAAGGTCAC	-32159272	True	NA	1	True	AATAAA	-16	NA	32159303	32149005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32149614_32149752_32149781_32150318_32150480_32150991_32151020_32151486_32151552_32152066_32152095_32152561_32152627_32154243_32154319_32158983
transcript_95264.known	chr22	-	2407	5	FSM	ENSG00000128253.16	ENST00000400237.2	2407	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.29903810567666	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCTAATGGATTATGTGACTT	-32203467	False	NA	-3	True	AATAAA	-14	NA	32203477	32190437	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32191353_32192901_32193193_32194344_32194491_32202332_32202551_32202640
transcript_95265.known	chr22	-	1171	4	FSM	ENSG00000128253.16	ENST00000628378.1	1171	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1.4142135623731	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTACTTCGTAAAAGCATTA	-32202501	False	NA	NA	False	AAGAAA	-30	NA	32202511	32190705	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32191353_32192901_32193193_32194344_32194399_32202332
transcript_95268.known	chr22	-	2019	12	FSM	ENSG00000100220.12	ENST00000216038.6	2019	12	0	0	0	0	multi-exon	FALSE	canonical	3	1267	junction_1	99.6411744027721	2724	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTTTCGTCTGTTGCTTTG	-32397327	True	NA	-10	True	AAGAAA	-29	NA	32412247	32387581	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32388100_32392239_32392360_32393891_32394003_32395025_32395215_32396073_32396250_32397940_32398101_32399602_32399760_32401746_32401904_32406661_32406762_32408174_32408243_32408754_32408834_32412063
transcript_95269.known	chr22	+	1921	9	FSM	ENSG00000100225.18	ENST00000425028.5	1921	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	178.411699097901	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469203	True	NA	57	True	ATTAAA	-16	NA	32474797	32498829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475125_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_95270.known	chr22	+	1535	9	FSM	ENSG00000100225.18	ENST00000452138.3	1535	9	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_1	181.946420684772	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCGAGTGTTATTTTCTGAT	32474767	False	NA	NA	False	NA	NA	NA	32475236	32498608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475399_32479132_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_95271.known	chr22	+	1888	9	FSM	ENSG00000100225.18	ENST00000397426.5	1888	9	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	172.636856942543	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474787	False	NA	57	True	ATTAAA	-16	NA	32475256	32498829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475399_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_95273.known	chr22	+	1900	8	FSM	ENSG00000100225.18	ENST00000420700.5	1900	8	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	181.76728786769	215	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	NA	False	NA	57	True	ATTAAA	-16	NA	32474675	32498829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475125_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_95276.nnic	chr22	+	1601	8	NIC	ENSG00000100225.18	novel	1888	9	NA	NA	-8	0	combination_of_known_splicesites	FALSE	canonical	2	29	junction_1	187.561364108183	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32474779	False	NA	57	True	ATTAAA	-16	NA	32475248	32498829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_32475399_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_95278.known	chr22	+	2060	9	FSM	ENSG00000100225.18	ENST00000266087.12	2060	9	0	0	0	0	multi-exon	FALSE	canonical	3	454	junction_1	54.9357579359746	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGGTGGTCTTGACTTTTA	32469216	True	NA	57	True	ATTAAA	-16	NA	32474810	32498829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_32475125_32478980_32479276_32483896_32484125_32485067_32485210_32487744_32487829_32491085_32491182_32493104_32493282_32495492_32495531_32498143
transcript_95279.known	chr22	-	7867	14	FSM	ENSG00000185666.15	ENST00000358763.7	7867	14	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_4	9.07692307692308	26	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATATGGTTTTGTATGAAT	-33056787	True	NA	NA	False	AAGAAA	-33	NA	33058381	32507819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_32513825_32518042_32518335_32527917_32528006_32528873_32529009_32533792_32533896_32538035_32538111_32541570_32541714_32596673_32596737_32864914_32865005_32868965_32869126_32931389_32931482_32980644_32980703_33006351_33006825_33058291
transcript_9528.known	chr1	+	1590	12	FSM	ENSG00000186141.9	ENST00000369294.5	1590	12	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_11	59.6112752105791	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTGCAGTGGGATAAGTCGC	145821815	True	NA	11	True	AATAAA	-21	NA	145824175	145842493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145824370_145825756_145825924_145826453_145826710_145826819_145827006_145828748_145828838_145833259_145833365_145833489_145833583_145836493_145836575_145836814_145836867_145837535_145837597_145838055_145838207_145842338
transcript_95283.nnic	chr22	-	2744	4	NNC	ENSG00000286592.1	novel	2729	4	NA	NA	50944	11	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	1.24721912892465	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTTTTAGTGTTTGTGTCAG	-34842833	True	NA	NA	False	AATAAA	-23	NA	34842903	34756664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_34759062_34760358_34760488_34762492_34762600_34842792
transcript_95287.nic	chr22	+	1445	6	ISM	ENSG00000100281.14	ENST00000418170.5	4216	12	-12	30240	-12	0	5prime_fragment	FALSE	canonical	3	33	junction_1	26.3560239793486	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	35253688	True	NA	2	True	AAAAAG	-7	NA	35257474	35265567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_95288.known	chr22	+	1325	5	FSM	ENSG00000100281.14	ENST00000455359.5	1325	5	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_1	21.7987958383026	350	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAAGAGAAGGACAAAGAGAG	35253709	True	NA	2	True	AAAAAG	-7	NA	35257495	35265567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35263981_35264097_35264647
transcript_95289.nic	chr22	+	1333	5	ISM	ENSG00000100281.14	ENST00000216106.6	4095	11	-18	30237	-12	0	5prime_fragment	FALSE	canonical	3	30	junction_4	31.9951168149141	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253688	True	NA	5	True	AAAAAG	-10	NA	35257474	35265570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_35257558_35262322_35262422_35263077_35263227_35263795_35263875_35264647
transcript_95290.known	chr22	+	1257	4	FSM	ENSG00000100281.14	ENST00000420166.5	1257	4	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_3	32.3831231765354	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GAGAAGGACAAAGAGAGAGA	35253665	True	NA	5	True	AAAAAG	-10	NA	35257451	35265570	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35263077_35263227_35263795_35263875_35264647
transcript_95292.known	chr22	+	575	2	FSM	ENSG00000100281.14	ENST00000466438.1	575	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GAGTGCTGCCTAGGTAGGTC	35253702	True	NA	NA	False	GGGGCT	-3	NA	35257488	35258588	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35257558_35258082
transcript_95293.known	chr22	+	2278	15	FSM	ENSG00000100284.22	ENST00000449058.7	2278	15	0	0	0	0	multi-exon	FALSE	canonical	3	163	junction_14	21.3724264472918	166	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	35295975	True	NA	13	True	ATTAAA	-13	NA	35299893	35347973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_95295.nnic	chr22	+	2266	14	NIC	ENSG00000100284.22	novel	2278	15	NA	NA	23	0	combination_of_known_splicesites	TRUE	canonical	3	15	junction_2	55.7040998990391	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTGCTAGCAGCATTGTCA	35295908	True	NA	13	True	ATTAAA	-13	NA	35299826	35347973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_35299981_35317876_35317962_35323027_35323178_35323495_35323631_35323767_35323915_35327270_35327388_35330346_35330481_35332980_35333015_35333403_35333498_35334327_35334449_35338712_35338789_35345724_35345785_35346929_35346970_35347054
transcript_95298.nic	chr22	+	688	4	ISM	ENSG00000100284.22	ENST00000395736.7	560	6	-63	413	23	-206	5prime_fragment	FALSE	canonical	3	201	junction_3	14.7044966667419	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCAGGGAAAGAATGTCT	35295908	True	NA	NA	False	NA	NA	NA	35299826	35323397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_35299981_35317876_35317962_35321958_35322038_35323027
transcript_95301.known	chr22	+	1554	5	FSM	ENSG00000100292.18	ENST00000216117.9	1554	5	0	0	0	0	multi-exon	FALSE	canonical	2	42	junction_1	14.7139389695622	304	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTGAAGTAGTTTTCATGG	35379948	True	NA	18	True	AATAAA	-19	NA	35381095	35394207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35381197_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_95303.known	chr22	+	1697	5	FSM	ENSG00000100292.18	ENST00000481190.2	1697	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	32.3138902022025	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGTTTTCATGGGCTTTGT	35379945	True	NA	25	True	AATAAA	-26	NA	35381092	35394214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35381330_35383105_35383227_35386684_35387177_35389863_35389964_35393467
transcript_95305.known	chr22	+	3458	17	FSM	ENSG00000100297.16	ENST00000216122.9	3458	17	0	0	0	0	multi-exon	FALSE	canonical	3	1181	junction_10	102.752737189819	422	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCGCCTGGTCATTGTTGAA	35376293	True	NA	19	True	AATACA	-16	NA	35400139	35425431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_35400209_35400430_35400606_35403206_35403334_35403413_35403543_35406552_35406726_35408407_35408564_35410743_35410911_35412509_35412682_35413874_35413987_35415828_35415973_35416338_35416405_35416637_35416815_35417743_35417857_35419883_35420013_35421317_35421461_35423213_35423342_35424153
transcript_95312.known	chr22	-	582	4	FSM	ENSG00000198125.13	ENST00000406324.5	582	4	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_3	1.69967317119759	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTGGGCCCCGGGTTCAAG	NA	False	NA	NA	False	NA	NA	NA	35622561	35607271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35607444_35610883_35611107_35617162_35617266_35622477
transcript_95313.nnic	chr22	-	955	3	NIC	ENSG00000198125.13	novel	1043	3	NA	NA	-5	0	combination_of_known_splicesites	FALSE	canonical	1	1	junction_2	3.5	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTTCTGCCTGGCATTTTTC	-35622488	True	NA	0	True	AATAAA	-19	NA	35622529	35606763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_35607444_35610883_35611107_35622477
transcript_95315.known	chr22	-	7224	14	FSM	ENSG00000100320.23	ENST00000438146.7	7224	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_5	114.746130898663	183	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	-36027546	True	NA	-5	True	AATAAA	-15	NA	36028824	35738735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35938846_35938898_36028239
transcript_9532.known	chr1	-	9135	9	FSM	ENSG00000265491.5	ENST00000582693.5	9135	9	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	6.48074069840786	30	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGTGTTCTCATTTTGTT	-145824081	False	NA	3	True	AATAAA	-18	NA	145824095	145738867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145746998_145747994_145748111_145750406_145750501_145751437_145751511_145752977_145753050_145771710_145771920_145784538_145784597_145788907_145788967_145823771
transcript_95320.known	chr22	-	1254	13	FSM	ENSG00000100320.23	ENST00000416721.6	1254	13	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_12	84.0459530389312	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCAATATTTACTAGTAGAGG	-35840110	True	NA	-31	True	NA	NA	NA	35840284	35744147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_95333.known	chr22	-	1706	12	FSM	ENSG00000100320.23	ENST00000414461.6	1706	12	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_4	147.255049444075	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCCCTCCTGTCTTCTCCGT	-35840044	True	NA	-3	True	ATTAAA	-20	NA	35840218	35743601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760033_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781744_35809779_35810005_35840191
transcript_95335.known	chr22	-	6932	12	FSM	ENSG00000100320.23	ENST00000405409.6	6932	12	0	0	0	0	multi-exon	TRUE	canonical	3	18	junction_3	130.731508339525	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTTTGGGCTGTGTGTATT	NA	False	NA	-5	True	AATAAA	-15	NA	35840587	35738735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779_35810005_35840191
transcript_95345.nnic	chr22	-	717	2	NNC	ENSG00000100320.23	novel	6932	12	NA	NA	-66	-60228	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACTGCTTTATTTTTTAAAA	NA	False	NA	NA	False	ATTAAA	-20	NA	35840479	35838255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_35838685_35840191
transcript_95346.known	chr22	-	1354	12	FSM	ENSG00000100320.23	ENST00000397303.6	1354	12	0	0	0	0	multi-exon	FALSE	canonical	3	128	junction_11	79.7317817736026	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TTTAAACTGTGGTAAAAAAA	NA	False	NA	NA	False	NA	NA	NA	35810004	35743957	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_35744250_35745922_35745996_35746472_35746562_35756104_35756145_35759887_35760021_35761201_35761295_35761414_35761469_35765422_35765484_35768256_35768350_35778024_35778079_35781599_35781747_35809779
transcript_95347.known	chr22	-	2429	5	FSM	ENSG00000128335.14	ENST00000358502.10	2429	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_3	3.83242742918897	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGACTTGTTCGAGTCAT	-36238941	True	NA	-5	True	AATAAA	-17	NA	36239527	36226208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36228281_36231339_36231467_36233152_36233242_36233401_36233456_36239440
transcript_95348.known	chr22	-	7451	41	FSM	ENSG00000100345.23	ENST00000216181.11	7451	41	0	0	0	0	multi-exon	TRUE	canonical	3	729	junction_34	194.160140090596	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGCCGTGTCTGTAGCATT	-36373604	True	NA	-5	True	AATAAA	-16	NA	36387967	36281279	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36282786_36284092_36284266_36284402_36284512_36285120_36285330_36285657_36285782_36285864_36285954_36286717_36286847_36288251_36288414_36288726_36288940_36289084_36289298_36291985_36292235_36293328_36293482_36293758_36293864_36294091_36294299_36294931_36295077_36295504_36295718_36296842_36297015_36298918_36299043_36300126_36300265_36300850_36301058_36301533_36301666_36302567_36302677_36303994_36304156_36305032_36305103_36305929_36306052_36306413_36306608_36309281_36309397_36312048_36312223_36314144_36314319_36316516_36316670_36318206_36318326_36319539_36319636_36320219_36320364_36320797_36320897_36321757_36321822_36322428_36322522_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_95349.nic	chr22	-	931	6	NIC	ENSG00000100345.23	novel	789	6	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	374.959517814924	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTTATTGACTGCCTAGTA	-36373652	True	NA	NA	False	AGTAAA	-15	NA	36388015	36325032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_36325124_36326567_36326662_36327460_36327489_36341369_36341527_36348903_36349256_36387806
transcript_95351.known	chr22	+	510	2	FSM	ENSG00000223695.1	ENST00000424761.1	510	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATGGTGGCTCATGCCTGT	36388579	False	NA	NA	False	NA	NA	NA	36388625	36396517	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_36388736_36396117
transcript_95361.known	chr22	-	736	4	FSM	ENSG00000100348.10	ENST00000487725.1	736	4	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_3	318.911691015972	77	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTTCTCCCAGGATGTGTG	-36477885	True	NA	NA	False	NA	NA	NA	36481632	36467548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480749_36481563
transcript_95362.known	chr22	-	1280	4	FSM	ENSG00000100348.10	ENST00000416967.1	1280	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	315.140533025435	506	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-36477887	True	NA	-14	True	AATAAA	-19	NA	36481634	36467045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480788_36481563
transcript_95363.known	chr22	-	912	4	FSM	ENSG00000100348.10	ENST00000403313.5	912	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	333.053549247965	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTCCCATACGCCTTTCA	-36481235	False	3747	NA	False	NA	NA	NA	36481340	36467590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481142
transcript_95381.known	chr22	-	1336	4	FSM	ENSG00000100348.10	ENST00000216185.7	1336	4	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_3	26.2424592343528	2622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAATGTCACATCTGTGTG	-36477893	True	NA	-14	True	AATAAA	-19	NA	36481640	36467045	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36467918_36476732_36476857_36480574_36480838_36481563
transcript_95382.known	chr22	-	4906	9	FSM	ENSG00000100350.16	ENST00000397224.9	4906	9	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_8	10.5475115548645	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTATGTTTGAGTGCTATTT	-36505964	True	NA	-16	True	AGTAAA	-19	NA	36507040	36487189	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36490268_36493632_36493804_36495966_36496209_36497990_36498157_36501240_36501408_36504097_36504368_36504514_36504767_36505895_36506424_36507008
transcript_95392.known	chr22	-	1880	15	FSM	ENSG00000100353.18	ENST00000216190.13	1880	15	0	0	0	0	multi-exon	TRUE	canonical	3	1480	junction_9	105.668522913372	4311	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCATCGTCTGCCTGCATT	-36501563	True	NA	-23	True	AATAAA	-23	NA	36529166	36510854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36529075
transcript_95393.known	chr22	-	1851	15	FSM	ENSG00000100353.18	ENST00000405442.5	1851	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	461.331834176322	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACATTTAGCAGATGAAATA	-36528887	False	NA	-67	True	NA	NA	NA	36528897	36510898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36511001_36511502_36511787_36512459_36512603_36516477_36516608_36516704_36516791_36517300_36517432_36518762_36518911_36519404_36519538_36520575_36520689_36523208_36523282_36523894_36523981_36524595_36524733_36525663_36525710_36525998_36526132_36528791
transcript_954.nic	chr1	-	1054	4	ISM	ENSG00000127054.22	ENST00000526797.5	659	7	-51	3855	-22	0	5prime_fragment	FALSE	canonical	3	13	junction_1	227.063867667227	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	NA	False	NA	-18	True	AATGAA	-15	NA	1324709	1318680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_1319434_1320455_1320530_1320995_1321094_1324580
transcript_9540.known	chr1	-	2902	14	FSM	ENSG00000131788.16	ENST00000393045.7	2902	14	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_13	78.2115928391557	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-145859065	False	3041	-4	True	AATAAA	-15	NA	145859081	145848521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145858966
transcript_95402.nic	chr22	-	857	8	NIC	ENSG00000100360.15	novel	1073	7	NA	NA	14	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	225.560707245436	325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772129	True	NA	-8	True	AATAAA	-17	NA	36776139	36758210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673_36775795_36776030
transcript_95406.known	chr22	-	902	2	FSM	ENSG00000100360.15	ENST00000476548.1	902	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGGGTAGGTGCTATGAT	NA	False	NA	NA	False	ATTAAA	-16	NA	36776256	36772402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36772722_36775673
transcript_95407.known	chr22	-	1073	7	FSM	ENSG00000100360.15	ENST00000433985.7	1073	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	205.80006478781	1058	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772109	True	NA	-8	True	AATAAA	-17	NA	36776119	36758210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36758410_36762903_36763014_36763918_36764037_36766137_36766198_36767305_36767366_36767782_36767863_36775673
transcript_95408.known	chr22	-	6475	5	FSM	ENSG00000100360.15	ENST00000471809.5	6475	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	276.238461297481	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAAGCAGCAGCTCCTTCCAC	-36772115	True	NA	-8	True	AATAAA	-17	NA	36776125	36758210	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36764037_36766137_36766198_36767305_36767366_36767782_36767860_36775673
transcript_9541.nic	chr1	-	2968	14	NIC	ENSG00000131788.16	novel	2902	14	NA	NA	-9	0	intron_retention	FALSE	canonical	3	277	junction_12	36.8812262820938	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGAGTGTCATGGAGATGG	-145856804	True	NA	-4	True	AATAAA	-15	NA	145859845	145848521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_145849713_145850231_145850270_145850452_145850587_145850770_145850940_145851019_145851154_145853503_145853665_145853812_145853887_145854457_145854564_145854745_145854881_145855735_145855827_145856067_145856119_145856346_145856432_145856588_145857007_145859664
transcript_95412.nnic	chr22	-	716	5	NNC	ENSG00000100362.13	novel	595	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	25.1047804212664	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36817473	True	NA	-20	True	AATAAA	-15	NA	36817522	36800702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817333
transcript_95413.nic	chr22	-	707	5	NIC	ENSG00000100362.13	novel	595	5	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	3	21	junction_4	16.3305694940501	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36817486	False	NA	-20	True	AATAAA	-15	NA	36817535	36800702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817355
transcript_95414.nnic	chr22	-	647	5	NNC	ENSG00000100362.13	novel	595	5	NA	NA	-8	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_4	23.4147389479362	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36817473	True	NA	-20	True	AATAAA	-15	NA	36817522	36800702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817402
transcript_95415.nnic	chr22	-	660	5	NNC	ENSG00000100362.13	novel	595	5	NA	NA	-125	0	at_least_one_novel_splicesite	FALSE	canonical	3	16	junction_4	18.3915741577495	33	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	NA	False	NA	-20	True	AATAAA	-15	NA	36817639	36800702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36817506
transcript_95417.nnic	chr22	-	876	5	NNC	ENSG00000100362.13	novel	470	4	NA	NA	-21	2142	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	24.0728062344214	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTTATTTATTTATTTA	-36817486	False	NA	NA	False	AATAAA	-20	NA	36817535	36811307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_36811693_36813645_36813756_36815102_36815236_36816944_36817013_36817355
transcript_95420.known	chr22	-	595	5	FSM	ENSG00000100362.13	ENST00000216200.9	595	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	25.1047804212664	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCCAGGCCTGGTCAGGCA	NA	False	NA	-1	True	AATAAA	-34	NA	36819479	36800683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944_36817013_36819430
transcript_95421.known	chr22	-	550	4	FSM	ENSG00000100362.13	ENST00000417718.7	550	4	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	6.12825877028341	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACTCTGCTTGCTCAGGAAG	-36816986	False	NA	-20	True	AATAAA	-15	NA	36817035	36800702	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36800919_36813645_36813756_36815102_36815236_36816944
transcript_95422.known	chr22	-	470	4	FSM	ENSG00000100362.13	ENST00000443735.1	470	4	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_3	17.8200885394982	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTAGCCGTGACCTGGG	-36817465	True	NA	NA	False	NA	NA	NA	36817514	36813645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36813756_36815102_36815236_36816944_36817013_36817355
transcript_95423.known	chr22	-	568	5	FSM	ENSG00000100362.13	ENST00000406910.6	568	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	28.252212302756	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTCTGCTTGCTCAGGAAGAC	-36816952	False	NA	-18	True	AATAAA	-17	NA	36817001	36800700	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_36800919_36811474_36811525_36813645_36813756_36815102_36815236_36816944
transcript_95426.known	chr22	-	1125	3	FSM	ENSG00000128311.14	ENST00000249042.8	1125	3	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_2	41	655	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTAGTGTGTTTGCCTGCCTC	-37018196	True	NA	-3	True	AATAAA	-16	NA	37019447	37010864	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37011326_37018137_37018754_37019399
transcript_95431.known	chr22	-	688	6	FSM	ENSG00000133466.14	ENST00000497071.1	688	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2.65329983228432	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTACCTTGTGTA	-37199163	True	NA	-2	True	AATAAA	-16	NA	37199385	37190552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37190678_37190864_37190929_37191671_37191738_37195380_37195513_37197602_37197842_37199323
transcript_95433.nnic	chr22	-	724	6	NNC	ENSG00000133466.14	novel	688	6	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_5	2.41660919471891	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGGTCTTGTACCTTGTGTA	-37199179	True	NA	-2	True	AATAAA	-16	NA	37199401	37190552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_37190678_37190864_37190929_37191671_37191738_37195380_37195513_37197602_37197862_37199323
transcript_95439.known	chr22	-	2893	3	FSM	ENSG00000133466.14	ENST00000337843.7	2893	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	2.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCAGACTGGTTCTTTCT	-37188086	True	NA	-5	True	ATTAAA	-21	NA	37188247	37180165	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37182736_37185217_37185456_37188162
transcript_9544.known	chr1	+	1473	8	FSM	ENSG00000186364.12	ENST00000334513.6	1473	8	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_2	6.88684045325369	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	145845424	True	NA	11	True	AATAAA	-22	NA	145845629	145848954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145845833_145846012_145846197_145846432_145846459_145846597_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_95440.known	chr22	-	1647	4	FSM	ENSG00000133466.14	ENST00000397110.6	1647	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	7.58653778449403	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGATTCAGACTGGTTCTTTC	-37188125	True	NA	-6	True	ATTAAA	-20	NA	37188286	37180166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37180868_37182151_37182736_37185217_37185456_37188162
transcript_95442.known	chr22	-	1472	7	FSM	ENSG00000128340.15	ENST00000249071.11	1472	7	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_5	3.74165738677394	83	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTTTGGAGATATCGTGATTT	-37243762	True	NA	-10	True	AATAAA	-14	NA	37244269	37225269	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37226040_37226670_37226804_37231230_37231391_37231931_37231995_37232800_37232919_37241586_37241659_37244113
transcript_95444.nnic	chr22	-	426	3	NNC	ENSG00000128340.15	novel	1472	7	NA	NA	-37	-1252	intron_retention	FALSE	canonical	0	0	junction_1	5.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTTGTCTCAGGGTTTGCT	-37243808	True	NA	NA	False	AATAAA	-15	NA	37244315	37233655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_37233808_37241586_37241659_37244113
transcript_95446.known	chr22	-	2073	8	FSM	ENSG00000100060.18	ENST00000356998.8	2073	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_5	3.98978286964827	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	-37486307	True	NA	0	True	ATTAAA	-21	NA	37486384	37469062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37480720_37480770_37485922
transcript_95447.known	chr22	-	2034	7	FSM	ENSG00000100060.18	ENST00000416983.7	2034	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	7.7817450199525	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGTCCAGTTTTCTGTT	-37486310	True	NA	0	True	ATTAAA	-21	NA	37486387	37469062	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37470030_37472442_37472529_37474511_37474678_37476895_37476982_37479344_37479499_37480196_37480300_37485915
transcript_95448.nic	chr22	-	1548	4	ISM	ENSG00000100065.15	ENST00000467812.1	1910	5	1646	-1	1646	0	3prime_fragment	FALSE	canonical	3	79	junction_1	9.2736184954957	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	37492930	37490361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643
transcript_95449.known	chr22	-	2169	8	FSM	ENSG00000100065.15	ENST00000488141.5	2169	8	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_5	9.60442075084092	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGCTGGTGGCCTTCTGCTTG	NA	False	NA	-2	True	ATTAAA	-16	NA	37496780	37490361	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37491394_37491754_37491868_37492434_37492551_37492643_37492803_37494085_37494189_37495516_37495587_37495759_37496004_37496448
transcript_95451.known	chr22	+	2800	17	FSM	ENSG00000100083.19	ENST00000343632.9	2800	17	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	25.4545397473614	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37606374	True	NA	17	True	AATAAA	-18	NA	37608833	37633564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37624968_37625077_37625796_37625950_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_95455.known	chr22	+	2528	15	FSM	ENSG00000100083.19	ENST00000325180.12	2528	15	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	67.0382163320266	80	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGCTCTCGTGGCCCT	37606385	True	NA	17	True	AATAAA	-18	NA	37608844	37633564	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37608904_37614189_37614275_37616921_37616998_37618447_37618547_37620237_37620362_37620812_37620914_37621615_37621697_37623326_37623468_37623551_37623634_37629461_37629527_37629997_37630171_37630902_37631100_37631995_37632166_37632404_37632516_37632600
transcript_95459.known	chr22	+	1384	3	FSM	ENSG00000100083.19	ENST00000489772.5	1384	3	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	41.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	TAGTAAGAAAATAATGTACA	37606370	True	NA	NA	False	AAAAAG	-7	NA	37608829	37618146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37608904_37614189_37614275_37616921
transcript_95463.known	chr22	+	2012	2	FSM	ENSG00000241360.2	ENST00000215904.7	2012	2	0	0	0	0	multi-exon	FALSE	canonical	3	480	junction_1	0	76	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACCTGTGTTTGAGTCTATG	37656456	True	NA	18	True	AATAAA	-18	NA	37658722	37666932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37659357_37665554
transcript_95467.known	chr22	+	528	4	FSM	ENSG00000100097.12	ENST00000215909.10	528	4	0	0	0	0	multi-exon	FALSE	canonical	3	156	junction_2	12.684198393627	743	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37673773	True	NA	13	True	AATAAA	-26	NA	37675635	37679802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37675712_37676985_37677066_37678482_37678655_37679602
transcript_95470.nnic	chr22	+	410	3	NIC	ENSG00000100097.12	novel	528	4	NA	NA	-54	0	combination_of_known_splicesites	FALSE	canonical	2	11	junction_2	76.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37675562	False	NA	13	True	AATAAA	-26	NA	37675581	37679802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_37675712_37676985_37677066_37679602
transcript_95473.nnic	chr22	+	674	3	NNC	ENSG00000100097.12	novel	185	3	NA	NA	417	0	at_least_one_novel_splicesite	FALSE	canonical	2	5	junction_1	90.5	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCCTCGTGTGTGTGCTT	37675553	False	NA	13	True	AATAAA	-26	NA	37677415	37679802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_37677718_37678482_37678655_37679602
transcript_95483.known	chr22	+	903	7	FSM	ENSG00000273899.5	ENST00000611699.1	903	7	0	0	0	0	multi-exon	FALSE	canonical	3	247	junction_6	20.5182845286832	1605	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTTCCATGTGTGCCTTCAT	37682814	True	NA	20	True	ATTAAA	-14	NA	37686359	37693471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173_37691425_37693331
transcript_95493.known	chr22	+	2830	6	FSM	ENSG00000273899.5	ENST00000359114.9	2830	6	0	0	0	0	multi-exon	FALSE	canonical	3	283	junction_5	11.0090871556183	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCATGTGTGCCTTCATTTC	37682797	True	NA	23	True	ATTAAA	-17	NA	37686342	37693474	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37686476_37687909_37688016_37688311_37688361_37688849_37688993_37690696_37690795_37691173
transcript_9550.nnic	chr1	+	1513	6	NNC	ENSG00000186364.12	novel	1473	8	NA	NA	-19	0	intron_retention	FALSE	canonical	1	2	junction_3	7.41350119714026	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	145845405	True	NA	11	True	AATAAA	-22	NA	145845610	145848954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_145845833_145846432_145846691_145847249_145847349_145847516_145847720_145848111_145848265_145848376
transcript_95505.known	chr22	+	10085	24	FSM	ENSG00000100106.22	ENST00000644935.1	10085	24	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_11	180.499527409589	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CGTTAGAATACAGCAATTTA	37695439	True	NA	25	True	AATAAA	-17	NA	37697047	37776556	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37697090_37697587_37697697_37701305_37701480_37710426_37710567_37713209_37713412_37715762_37715935_37723184_37726504_37733297_37733413_37734398_37735443_37738641_37738720_37740894_37741033_37751771_37751829_37754876_37754985_37755100_37755191_37755549_37755660_37757612_37758139_37759153_37759265_37765669_37765818_37768073_37768177_37769027_37769188_37769261_37769376_37771649_37771737_37772600_37772765_37773782
transcript_95507.known	chr22	+	2204	1	FSM	ENSG00000189060.6	ENST00000340857.4	2204	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2009	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGAGCGGTGTATTTTTCCT	37771006	True	NA	17	True	AATAAA	-17	NA	37805228	37807432	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37805200_37807400
transcript_9551.nic	chr1	+	1447	6	NIC	ENSG00000186364.12	novel	1473	8	NA	NA	-19	0	intron_retention	FALSE	canonical	3	11	junction_1	4.24264068711928	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCCTGTCTCAGTTTTTCC	145845405	True	NA	11	True	AATAAA	-22	NA	145845610	145848954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_145845833_145846432_145846691_145847249_145847349_145847582_145847720_145848111_145848265_145848376
transcript_95511.nic	chr22	+	1584	9	ISM	ENSG00000100116.17	ENST00000323205.10	1656	10	-4	279	-4	0	5prime_fragment	TRUE	canonical	3	21	junction_1	108.463055346049	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805112	True	NA	16	True	NA	NA	NA	37807900	37816897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_37808164_37809948_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_95515.known	chr22	+	1473	9	FSM	ENSG00000100116.17	ENST00000248924.11	1473	9	0	0	0	0	multi-exon	FALSE	canonical	3	314	junction_2	18.9802528961023	361	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805145	True	NA	16	True	NA	NA	NA	37807933	37816897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_95516.nnic	chr22	+	1545	9	NNC	ENSG00000100116.17	novel	1473	9	NA	NA	-1	0	at_least_one_novel_splicesite	FALSE	canonical	3	13	junction_7	108.703078958234	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805115	True	NA	16	True	NA	NA	NA	37807903	37816897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_37808164_37810026_37810158_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815877_37816199_37816322_37816566
transcript_95522.nic	chr22	+	1351	8	NIC	ENSG00000100116.17	novel	1473	9	NA	NA	2	0	combination_of_known_junctions	FALSE	canonical	3	32	junction_1	112.064667919547	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACTCTGGTCTGCTTTATTG	37805136	True	NA	16	True	NA	NA	NA	37807924	37816897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_37808164_37812886_37812989_37813462_37813610_37815125_37815281_37815417_37815501_37815662_37815835_37816199_37816322_37816566
transcript_95534.known	chr22	-	1140	1	FSM	ENSG00000100124.15	ENST00000609706.1	1140	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	133	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGAGGCCTTAGTTTAGCC	-37848867	True	NA	-2	True	AATAAA	-19	NA	37849318	37848178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37848200_37849300
transcript_95535.known	chr22	+	2282	11	FSM	ENSG00000100129.18	ENST00000406934.5	2282	11	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	784.26166551732	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTCGTCTCATTATTGT	37816284	True	NA	35	True	AGTAAA	-17	NA	37849480	37888630	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37850064_37851279_37851491_37858678_37858741_37862968_37863039_37863271_37863346_37870175_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_95536.known	chr22	+	1294	6	FSM	ENSG00000100129.18	ENST00000482600.5	1294	6	0	0	0	0	multi-exon	FALSE	canonical	3	2309	junction_1	188.715235209031	511	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTCGTCTCATTATTGTA	37870100	False	NA	36	True	AGTAAA	-18	NA	37870164	37888631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37870348_37874369_37874525_37875840_37876012_37877673_37878172_37886764_37886846_37888425
transcript_95537.known	chr22	+	4710	16	FSM	ENSG00000100139.14	ENST00000215957.10	4710	16	0	0	0	0	multi-exon	TRUE	canonical	3	84	junction_5	8.75747299929228	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTGGCTGATACTGTGTGT	37904281	True	NA	NA	False	NA	NA	NA	37906296	37942822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37906569_37911951_37912001_37912350_37912493_37917706_37917796_37919035_37919179_37921971_37922427_37924659_37924718_37925660_37926044_37927410_37927827_37931798_37931934_37932552_37932680_37932797_37932889_37933038_37933113_37937079_37937195_37937745_37937793_37940708
transcript_95538.known	chr22	-	1942	7	FSM	ENSG00000128346.11	ENST00000403305.6	1942	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	2.91070819942883	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAACGGCCCTGTAAATGGT	-37953557	True	NA	NA	False	NA	NA	NA	37953601	37943049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_37944247_37944416_37944518_37945041_37945174_37947280_37947464_37951459_37951523_37953046_37953159_37953447
transcript_95543.known	chr22	+	584	5	FSM	ENSG00000100142.16	ENST00000470701.1	584	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	849.756251815778	779	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCCTTCCCCTCTGCTTAT	37927367	True	NA	16	True	AATAAA	-17	NA	37953726	37967801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953861_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_95552.known	chr22	+	2070	5	FSM	ENSG00000100142.16	ENST00000442738.7	2070	5	0	0	0	0	multi-exon	FALSE	canonical	3	1805	junction_4	112.226333808068	14431	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTCTGTTTTCTTA	37927339	True	NA	15	True	AATAAA	-16	NA	37953698	37969312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098_37967171_37967624
transcript_95553.known	chr22	+	615	5	FSM	ENSG00000100142.16	ENST00000483713.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_2	826.828881933862	1236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CAACCCCCTTCCCCTCTGCT	37927339	True	NA	13	True	AATAAA	-14	NA	37953698	37967798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953808_37956772_37956902_37959345_37959477_37967098_37967171_37967624
transcript_95554.known	chr22	+	760	4	FSM	ENSG00000100142.16	ENST00000606538.5	760	4	0	0	0	0	multi-exon	FALSE	canonical	3	1967	junction_3	52.8225541054408	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCTTCTGCGGCAGAGCTG	37927351	True	NA	48	True	NA	NA	NA	37953710	37967560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_37953808_37956772_37956843_37959345_37959477_37967098
transcript_95556.known	chr22	+	2164	13	FSM	ENSG00000100151.16	ENST00000404072.7	2164	13	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	41.5293570862829	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	NA	False	NA	13	True	AATAAA	-20	NA	38057199	38075701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38057490_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_95558.known	chr22	+	2058	13	FSM	ENSG00000100151.16	ENST00000356976.8	2058	13	0	0	0	0	multi-exon	FALSE	canonical	3	134	junction_1	14.4702760474322	184	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGTCGCAGTGGCTTCAGA	38054666	True	NA	13	True	AATAAA	-20	NA	38057403	38075701	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38057588_38057752_38057851_38059233_38059346_38065001_38065131_38067703_38067771_38069032_38069123_38070837_38070892_38071681_38071745_38072476_38072611_38072999_38073093_38073772_38073824_38074306_38074452_38074863
transcript_95569.nic	chr22	-	751	2	ISM	ENSG00000100156.12	ENST00000320521.10	2091	5	2336	0	2144	0	3prime_fragment	FALSE	canonical	2	2	junction_1	0	56	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTTCTATTCCTCCGCCCAG	-38080995	False	NA	NA	False	GATAAA	-20	NA	38081019	38078133	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38078705_38080839
transcript_95570.nic	chr22	-	481	2	ISM	ENSG00000100156.12	ENST00000320521.10	2091	5	2336	270	2144	-267	3prime_fragment	FALSE	canonical	2	2	junction_1	0	17	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCCGAGTCTGTATAACTCA	-38080995	False	NA	NA	False	AATAGA	-19	NA	38081019	38078403	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38078705_38080839
transcript_95572.nnic	chr22	-	1151	6	NIC	ENSG00000128298.18	novel	1865	9	NA	NA	-40	0	combination_of_known_splicesites	FALSE	canonical	2	5	junction_4	4.24264068711928	16	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCGGCAGCAGGACTG	-38097613	True	NA	-16	True	AATAAA	-16	NA	38097822	38084899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_38085376_38085685_38085733_38086241_38086450_38087123_38087265_38097031_38097179_38097690
transcript_95573.nic	chr22	-	735	2	ISM	ENSG00000128298.18	ENST00000681084.1	2024	4	3033	248	2994	0	3prime_fragment	FALSE	canonical	2	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCGGCAGCAGGACTG	-38085920	False	NA	-16	True	AATAAA	-16	NA	38085944	38084899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38085376_38085685
transcript_95574.known	chr22	-	3299	17	FSM	ENSG00000184381.20	ENST00000332509.8	3299	17	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_16	16.3037572356804	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGTTGTGTGTGCAGTG	-38180692	True	NA	0	True	AATAAA	-20	NA	38181830	38111494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38112306_38112503_38112578_38113486_38113655_38115526_38115682_38116074_38116212_38120758_38120910_38123094_38123259_38126370_38126450_38128268_38128431_38129453_38129563_38132830_38133014_38134987_38135085_38139981_38140170_38143104_38143289_38145437_38145654_38169217_38169472_38181663
transcript_95577.nnic	chr22	-	1396	11	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	2817	11	NA	NA	8230	12	multi-exon	FALSE	canonical	3	80	junction_10	293.8047140534	53	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38334642	True	NA	-103	True	NA	NA	NA	38336204	38291917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_95578.known	chr22	-	1770	15	FSM	ENSG00000283900.1	ENST00000400206.7	1770	15	0	0	0	0	multi-exon	FALSE	canonical	1	8	junction_10	436.904486830068	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-38396478	False	NA	-103	True	NA	NA	NA	38398522	38291917	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38291939_38293254_38293320_38294108_38294249_38294341_38294535_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336607_38336707_38361398_38361561_38380369_38380424_38380936_38380991_38398437
transcript_95580.nnic	chr22	-	1512	9	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	996	6	NA	NA	8202	0	multi-exon	FALSE	canonical	3	18	junction_1	473.127873174896	19	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCCTGGTGTGCCTCTTTCAT	-38334670	True	NA	-2	True	ATTAAA	-18	NA	38336232	38297601	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_-_38297999_38298093_38298204_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_95581.nnic	chr22	-	1487	8	Fusion	ENSG00000213923.13_ENSG00000244627.5	novel	1631	8	NA	NA	8202	0	multi-exon	FALSE	canonical	3	27	junction_1	436.460438397015	30	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTGCTGTGTGTTTCTTGCGT	-38334670	True	NA	-4	True	AATAAA	-16	NA	38336232	38296204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_-_38296687_38298785_38298935_38299894_38300066_38300723_38300953_38302860_38303010_38303137_38303249_38314081_38314170_38336124
transcript_9559.known	chr1	+	638	4	FSM	ENSG00000186364.12	ENST00000460879.5	638	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.85861230093008	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCCCCCAGGACCTACCAC	145845453	False	NA	NA	False	NA	NA	NA	145845658	145847689	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145845833_145846432_145846691_145847249_145847349_145847582
transcript_95590.known	chr22	-	974	5	FSM	ENSG00000244627.5	ENST00000457665.5	974	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	50.231339818882	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGTGAAACTCCGTTCCCCC	-38396816	True	NA	NA	False	NA	NA	NA	38398860	38350376	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38351000_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_95597.nnic	chr22	-	780	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	-12	-2410	at_least_one_novel_splicesite	FALSE	canonical	3	14	junction_1	46.4831958884068	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAAAGGGGTGTTTGCTGA	NA	False	NA	NA	False	AATAAA	-37	NA	38398941	38352786	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_38353135_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_95599.nnic	chr22	-	916	5	NNC	ENSG00000244627.5	novel	679	4	NA	NA	-12	-4478	at_least_one_novel_splicesite	FALSE	canonical	3	10	junction_1	47.9706941788422	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGCTTGCTTTTTTTTTAC	NA	False	NA	-2	True	ATTAAA	-25	NA	38398941	38354854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_38355339_38361398_38361561_38380369_38380424_38380936_38380991_38398779
transcript_956.known	chr1	-	485	4	FSM	ENSG00000127054.22	ENST00000534345.5	485	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	229.341569619543	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTCCAGGTCAGGTTCC	-1318748	True	NA	NA	False	NA	NA	NA	1324671	1319305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319525_1320455_1320530_1320995_1321097_1324580
transcript_9561.nic	chr1	-	1856	5	ISM	ENSG00000198483.13	ENST00000355594.9	3359	14	12493	0	12493	0	3prime_fragment	FALSE	canonical	3	102	junction_4	12.369316876853	643	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGCTGAGTGTAATTTTT	NA	False	NA	-5	True	AATAAA	-14	NA	145873373	145866563	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_-_145866766_145867286_145867393_145867990_145868057_145868310_145868401_145871981
transcript_95610.known	chr22	-	792	5	FSM	ENSG00000244627.5	ENST00000455209.5	792	5	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	51.3438165702551	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTTAACTTTCAGATTATT	-38396877	True	NA	NA	False	NA	NA	NA	38398921	38368897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38369380_38369985_38370046_38380369_38380424_38380936_38380991_38398779
transcript_95618.nnic	chr22	-	828	4	ISM	ENSG00000283900.1	ENST00000400206.7	1770	15	-214	69222	-214	-69222	5prime_fragment	FALSE	canonical	3	11	junction_3	49.4435705291059	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-38396692	False	NA	NA	False	NA	NA	NA	38398736	38361139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398437
transcript_95619.known	chr22	-	679	4	FSM	ENSG00000244627.5	ENST00000443658.5	679	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	27.9324582201822	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGTGAGACTCCGTCTCAAAA	-38396885	True	NA	NA	False	NA	NA	NA	38398929	38361139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38361561_38380369_38380424_38380936_38380991_38398779
transcript_95628.known	chr22	-	468	3	FSM	ENSG00000244627.5	ENST00000454577.1	468	3	0	0	0	0	multi-exon	FALSE	canonical	3	118	junction_2	7	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTAACAGGGTTTCCAATT	-38396876	True	NA	NA	False	NA	NA	NA	38398920	38380150	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38380424_38380936_38380991_38398779
transcript_95630.known	chr22	+	1694	5	FSM	ENSG00000100196.11	ENST00000216014.9	1694	5	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	2.95803989154981	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGTGTTTTTATTTATACCT	38467189	True	NA	18	True	AATAAA	-21	NA	38468095	38483447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211_38481465_38482495
transcript_95634.known	chr22	+	931	4	FSM	ENSG00000100196.11	ENST00000409006.3	931	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_3	3.39934634239519	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGGCCAATAGGTTAT	38467171	True	NA	NA	False	AATAAA	-20	NA	38468077	38481635	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38468325_38474522_38474624_38479592_38479752_38481211
transcript_95638.known	chr22	-	1853	2	FSM	ENSG00000100201.23	ENST00000431312.2	1853	2	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCTGACTGGAAGAGATTAAT	-38488951	False	NA	NA	False	AATATA	-15	NA	38488961	38485676	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38486441_38487872
transcript_95652.known	chr22	-	721	9	FSM	ENSG00000100206.11	ENST00000439567.5	721	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	8.22249201884684	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTATATCTTTAAAATAAAAT	-38569510	True	NA	NA	False	NA	NA	NA	38570131	38538294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38538410_38538538_38538613_38552665_38552708_38555356_38555410_38562286_38562370_38566589_38566737_38567582_38567628_38568205_38568290_38570053
transcript_95661.nnic	chr22	-	588	3	NNC	ENSG00000100206.11	novel	269	2	NA	NA	-37	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_1	12.5	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGTATGGTGAAAATATGTAA	NA	False	NA	1	True	AATAAA	-20	NA	38570241	38518947	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_38519112_38569165_38569391_38570042
transcript_95662.known	chr22	-	269	2	FSM	ENSG00000100206.11	ENST00000464842.1	269	2	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_1	0	231	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTCCTGAGATTTCTTTTT	-38569583	True	NA	-20	True	AATAAA	-22	NA	38570204	38569283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38569391_38570042
transcript_95674.known	chr22	+	1269	6	FSM	ENSG00000100211.11	ENST00000396811.6	1269	6	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_1	125.789665712252	1021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATAATCTCTCTGTGACCAAA	38653011	True	NA	10	True	ATTAAA	-10	NA	38656650	38673846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38656751_38665545_38665686_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_9569.known	chr1	-	3991	6	FSM	ENSG00000271601.4	ENST00000604000.4	3991	6	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	2.8	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCAGACTGACTCTTTCTTG	-145957744	True	NA	0	True	ATTAAA	-21	NA	145958017	145933422	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145936553_145936907_145936986_145937603_145937700_145942712_145942854_145947618_145947783_145957635
transcript_95693.known	chr22	+	615	5	FSM	ENSG00000100211.11	ENST00000411557.5	615	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	127.818230311642	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGAGCTGCACTTCCTGCCA	38653000	True	NA	NA	False	NA	NA	NA	38656639	38670989	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38656751_38656955_38657144_38667568_38667663_38668016_38668133_38670883
transcript_95695.known	chr22	-	786	2	FSM	ENSG00000228274.5	ENST00000431924.3	876	2	90	0	17	0	multi-exon	FALSE	canonical	2	3	junction_1	0	27	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTGTGGTAATCTGT	-38681558	False	NA	NA	False	AATAAA	-21	NA	38681770	38667584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38668326_38681725
transcript_95696.known	chr22	+	1133	5	FSM	ENSG00000100211.11	ENST00000216029.8	1146	5	17	-4	4	4	multi-exon	FALSE	canonical	3	305	junction_2	5.2618912949623	2789	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCTGTGACCAAAGTGACTAA	38653015	True	NA	18	True	ATTAAA	-18	NA	38656654	38673854	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38656751_38668016_38668133_38670883_38670990_38671069_38671189_38673158
transcript_95698.known	chr22	+	2031	4	FSM	ENSG00000100216.6	ENST00000216034.6	2031	4	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_2	66.6399946645323	3282	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTAGAGACATCTTTTGAA	38656578	True	NA	8	True	ATTAAA	-16	NA	38681956	38685421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38682096_38682322_38682442_38682878_38682997_38683766
transcript_95699.known	chr22	+	782	3	FSM	ENSG00000100216.6	ENST00000492561.1	782	3	0	0	0	0	multi-exon	FALSE	canonical	3	1368	junction_1	26	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCAGTGGGAGGGATGTG	38682140	False	NA	-30	True	NA	NA	NA	38682171	38684160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38682442_38682878_38682997_38683766
transcript_957.known	chr1	-	896	4	FSM	ENSG00000127054.22	ENST00000493534.6	896	4	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	229.891278651453	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATGAACCCACCAGGCTCT	-1318735	True	NA	NA	False	NA	NA	NA	1324658	1319059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319706_1320455_1320530_1320995_1321094_1324580
transcript_95700.nnic	chr22	-	1296	3	NIC	ENSG00000100246.13	novel	1474	4	NA	NA	-25	0	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	32.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	-38793095	True	NA	-6	True	ATTAAA	-16	NA	38794173	38778507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_38779614_38780925_38781010_38794067
transcript_95701.known	chr22	-	842	2	FSM	ENSG00000100246.13	ENST00000486019.1	842	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGACCAAGCAGCCTTTCCCG	-38793070	True	NA	NA	False	NA	NA	NA	38794148	38778852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38779614_38794067
transcript_95702.known	chr22	-	183	1	FSM	ENSG00000273096.1	ENST00000609428.1	183	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCCGGTTTCAGATGAAGTG	NA	False	NA	NA	False	AATAAA	-23	NA	38736792	38736609	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38736600_38736800
transcript_95703.known	chr22	-	1474	4	FSM	ENSG00000100246.13	ENST00000216068.9	1474	4	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0.471404520791032	458	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCATTCTACAGTCTCTTG	-38793065	True	NA	-6	True	ATTAAA	-16	NA	38794143	38778507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38779614_38780925_38781010_38782662_38782871_38794067
transcript_95704.known	chr22	-	758	2	FSM	ENSG00000100246.13	ENST00000475512.2	758	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTTCTGTCATCAGTGTAG	-38793054	True	NA	NA	False	GATAAA	-18	NA	38794132	38785304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38785998_38794067
transcript_95705.nnic	chr22	-	424	5	NNC	ENSG00000183741.12	novel	2213	4	NA	NA	-26	-1005	at_least_one_novel_splicesite	TRUE	canonical	2	2	junction_1	15.4029218007494	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTGGTTTCCAGAATTTCA	-38868391	True	NA	NA	False	AAGAAA	-1	NA	38872275	38870576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_38870670_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_95706.known	chr22	-	6052	5	FSM	ENSG00000183741.12	ENST00000407418.8	6052	5	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	6.04152298679729	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTGACTGGCTTTTCAAA	-38868332	True	NA	29	True	NA	NA	NA	38872216	38861421	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38867202_38871479_38871547_38871691_38871758_38871901_38871946_38872121
transcript_95708.known	chr22	+	1590	8	FSM	ENSG00000179750.16	ENST00000333467.4	1590	8	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	7.77751862218069	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCAAATGTGTAGATGTCTTT	38981923	True	NA	26	True	AATAAA	-39	NA	38982346	38992779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033_38992150_38992430
transcript_95709.known	chr22	+	1844	7	FSM	ENSG00000179750.16	ENST00000402182.7	1844	7	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_5	7.47031161033832	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTAGCGGACCTGTAGCTGG	38981975	True	NA	51	True	NA	NA	NA	38982398	38992804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_38982471_38984074_38984232_38985811_38986092_38986297_38986413_38989456_38989611_38991331_38991627_38992033
transcript_95715.known	chr22	-	691	5	FSM	ENSG00000249310.2	ENST00000513758.2	691	5	0	0	0	0	multi-exon	FALSE	canonical	3	4	junction_3	1.92028643696715	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGTCGTAATCATAGATGCG	NA	False	NA	NA	False	NA	NA	NA	38998209	38991558	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_38991619_38992397_38992582_38992937_38993004_38997480_38997738_38998085
transcript_95720.nnic	chr22	-	1283	4	NIC	ENSG00000249310.2	novel	691	5	NA	NA	-44	614	combination_of_known_splicesites	FALSE	canonical	1	3	junction_2	2.49443825784929	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGAGCATTTGGAGCCC	NA	False	NA	NA	False	ATTAAA	-21	NA	38998253	38990944	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_38991619_38992397_38992582_38997480_38997738_38998085
transcript_95732.known	chr22	+	1961	4	FSM	ENSG00000243811.12	ENST00000427494.6	1961	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	16.7597401199687	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAAGTTGAAAACCAGTTT	39021094	False	NA	8	True	AATAAA	-38	NA	39021112	39033261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39021537_39022821_39023015_39031693_39031974_39032197
transcript_95734.known	chr22	+	2644	4	FSM	ENSG00000244509.4	ENST00000361441.5	2644	4	0	0	0	0	multi-exon	FALSE	canonical	3	240	junction_1	49.2702299117383	1143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCCTTGTGTAATTTGTAGG	39011829	True	NA	12	True	AATAAA	-19	NA	39014256	39020352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39014380_39015594_39015752_39017765_39018046_39018268
transcript_95736.known	chr22	+	616	3	FSM	ENSG00000128394.17	ENST00000381565.2	616	3	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	30	65	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGGCCTCTGGGAAGTC	39040841	False	NA	3	True	AATAAA	-20	NA	39040856	39044423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39040978_39042936_39043091_39044082
transcript_95739.known	chr22	+	1564	8	FSM	ENSG00000239713.9	ENST00000407997.4	1564	8	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	12.5095881594226	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGTTTCCCTGTGTGATTG	39077230	False	NA	14	True	AATAAA	-24	NA	39077274	39087743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39077379_39078931_39079086_39080932_39081228_39081470_39081586_39083730_39083885_39086278_39086568_39087010_39087127_39087406
transcript_95741.known	chr22	+	1029	5	FSM	ENSG00000100298.16	ENST00000442487.8	1029	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	2.23606797749979	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	39097233	True	NA	NA	False	AATAAA	-18	NA	39097243	39104067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39097344_39100271_39100429_39101236_39101505_39101917_39102043_39103688
transcript_95742.known	chr22	+	1046	5	FSM	ENSG00000100298.16	ENST00000348946.8	1046	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	1.4142135623731	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	NA	False	NA	NA	False	AATAAA	-18	NA	39097223	39104067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39097344_39100271_39100429_39101236_39101505_39101917_39102043_39103691
transcript_95744.nic	chr22	+	811	3	ISM	ENSG00000100298.16	ENST00000442487.8	1029	5	3954	0	919	0	3prime_fragment	FALSE	canonical	0	0	junction_2	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	39101155	True	NA	NA	False	AATAAA	-18	NA	39101197	39104067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_39101505_39101917_39102043_39103688
transcript_95746.nic	chr22	+	808	3	ISM	ENSG00000100298.16	ENST00000348946.8	1046	5	3974	0	919	0	3prime_fragment	FALSE	canonical	2	4	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACCCAGTCTGTGGTATTT	39101155	True	NA	NA	False	AATAAA	-18	NA	39101197	39104067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_39101505_39101917_39102043_39103691
transcript_95748.known	chr22	-	3728	7	FSM	ENSG00000100311.17	ENST00000331163.11	3728	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	4.11298755975102	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTGAGGGTCTCCATAGAGG	-39244481	True	NA	NA	False	NA	NA	NA	39244982	39223358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39225314_39225694_39225848_39230083_39230229_39231621_39231828_39233434_39233525_39235777_39235875_39243900
transcript_958.known	chr1	-	773	4	FSM	ENSG00000127054.22	ENST00000532952.5	773	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	232.718714331272	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGACTGCATGAAGAAGGT	-1318719	True	NA	NA	False	NA	NA	NA	1324642	1319346	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319886_1320455_1320530_1320995_1321094_1324580
transcript_95817.known	chr22	-	1296	10	FSM	ENSG00000100316.16	ENST00000216146.9	1296	10	0	0	0	0	multi-exon	FALSE	canonical	3	22290	junction_9	5404.97071176725	249746	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-38740323	True	NA	-1	True	AATAAA	-19	NA	39319623	39312881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319594
transcript_95818.known	chr22	-	1289	9	FSM	ENSG00000100316.16	ENST00000401609.5	1289	9	0	0	0	0	multi-exon	FALSE	canonical	3	29191	junction_1	3362.7904869877	50599	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTGCCTCTTTCTTCAGGA	-39318306	False	NA	-1	True	AATAAA	-19	NA	39318614	39312881	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399
transcript_95819.known	chr22	-	616	2	FSM	ENSG00000100316.16	ENST00000464182.5	616	2	0	0	0	0	multi-exon	FALSE	canonical	3	29191	junction_1	0	2648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	-39313397	False	874	-3	True	AATAAA	-17	NA	39313705	39312883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190
transcript_9582.known	chr1	-	1620	4	FSM	ENSG00000131779.11	ENST00000369306.8	1620	4	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	3.09120616516523	348	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTTGGTCTGGTCCCTCAT	-145886782	False	31935	-2	True	ATTAAA	-19	NA	145918717	145911349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918632
transcript_95820.known	chr22	-	2108	10	FSM	ENSG00000100316.16	ENST00000465618.5	2108	10	0	0	0	0	multi-exon	FALSE	canonical	2	172	junction_7	15278.4201481116	10630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	-39320081	False	NA	-3	True	AATAAA	-17	NA	39320389	39312883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39312985_39313190_39313311_39313633_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39317022_39317460_39317630_39318399_39318593_39319726
transcript_95821.known	chr22	-	523	2	FSM	ENSG00000100316.16	ENST00000473638.5	523	2	0	0	0	0	multi-exon	FALSE	canonical	3	38849	junction_1	0	232	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATCTTGCCTCTTTCTTCAG	-39313421	False	NA	-3	True	AATAAA	-17	NA	39313729	39312883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39313311_39313633
transcript_95822.known	chr22	-	827	3	FSM	ENSG00000100316.16	ENST00000484615.5	827	3	0	0	0	0	multi-exon	FALSE	canonical	3	22290	junction_2	7396	1813	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAATTAACCTTGTGGACC	-38740349	True	NA	NA	False	NA	NA	NA	39319649	39317050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39317630_39318399_39318593_39319594
transcript_95823.known	chr22	-	1205	8	FSM	ENSG00000100316.16	ENST00000402527.5	1205	8	0	0	0	0	multi-exon	FALSE	canonical	3	1142	junction_7	12705.9438669868	868	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTGACCAATGACTTTGTCA	-38740323	True	NA	NA	False	NA	NA	NA	39319623	39313706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39313730_39314106_39314209_39314685_39314847_39315368_39315556_39316705_39316842_39317460_39317630_39318399_39318593_39319389
transcript_95824.known	chr22	+	1361	4	FSM	ENSG00000100321.15	ENST00000318801.8	1361	4	0	0	0	0	multi-exon	TRUE	canonical	3	444	junction_3	32.8667342798493	926	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTCATTCTTCTCTCCA	39349903	False	NA	17	True	AATAAA	-31	NA	39349924	39378389	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39377597
transcript_95830.known	chr22	+	406	1	FSM	ENSG00000280216.1	ENST00000623458.1	406	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAAGTTTGATTTACTTA	39379598	False	NA	6	True	AATAAA	-21	NA	39379609	39380015	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39379600_39380000
transcript_95831.known	chr22	+	928	4	FSM	ENSG00000100321.15	ENST00000415332.1	928	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	228.391476782008	47	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCTGTTTTGTGCCTAGTGAT	39345072	True	NA	6	True	AGTAAA	-14	NA	39349986	39377911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39350110_39374315_39374661_39376051_39376198_39377597
transcript_95832.known	chr22	+	4383	4	FSM	ENSG00000100321.15	ENST00000328933.10	4383	4	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_3	211.950203795346	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGATTGCAAGTGTGTC	39345076	True	NA	16	True	AATAAA	-19	NA	39349990	39385575	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39350110_39374315_39374554_39376051_39376198_39381695
transcript_95834.known	chr22	+	3198	11	FSM	ENSG00000100324.14	ENST00000216160.11	3198	11	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_6	13.499629624549	56	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGCGCTGTTGCTCATGTTT	39395779	True	NA	15	True	AATAAA	-28	NA	39399779	39431882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39399836_39415005_39415143_39415499_39415654_39416790_39416878_39417710_39417850_39418731_39418846_39419518_39419631_39421826_39421972_39426702_39426926_39428020_39428184_39430014
transcript_95836.known	chr22	+	5688	6	FSM	ENSG00000100335.15	ENST00000325301.7	5688	6	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	31.6328942716281	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGTGACTTGTGTGTGTCG	39498175	True	NA	6	True	AATAAA	-17	NA	39502289	39518132	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512231_39512495_39513516
transcript_95839.known	chr22	+	3838	6	FSM	ENSG00000100335.15	ENST00000433117.6	3838	6	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_4	43.1295722213889	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTGCATCTCTGACCAAAT	39498187	True	NA	8	True	ATTAAA	-20	NA	39502301	39516380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39502438_39504202_39504535_39511287_39511439_39511848_39512027_39512317_39512495_39513516
transcript_95841.known	chr22	+	1275	3	FSM	ENSG00000128272.18	ENST00000674835.2	1275	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	241	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	39497511	True	NA	-41	True	AAGAAA	-13	NA	39520603	39522602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521374_39521672_39521772
transcript_95842.known	chr22	+	1004	2	FSM	ENSG00000128272.18	ENST00000680446.1	1004	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGGATAGTCAGGAGCGT	39497485	True	NA	-41	True	AAGAAA	-13	NA	39520577	39522602	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521772
transcript_95843.known	chr22	+	2019	2	FSM	ENSG00000128272.18	ENST00000337304.2	2019	2	0	0	0	0	multi-exon	FALSE	canonical	3	482	junction_1	0	977	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTACTTGTGCGTTTGAATTC	39497471	True	NA	29	True	AATAAA	-17	NA	39520563	39522683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39521672_39521772
transcript_95844.known	chr22	+	1486	3	FSM	ENSG00000128272.18	ENST00000396680.3	1486	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	241	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTGTAGGGAAAGTACT	39497483	True	NA	14	True	AATAAA	-2	NA	39520575	39522668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_39520752_39521257_39521672_39521772
transcript_95849.known	chr22	-	820	4	FSM	ENSG00000187051.9	ENST00000334678.8	820	4	0	0	0	0	multi-exon	FALSE	canonical	3	722	junction_3	123.104291828785	7549	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGTGTTTGCTGCTGGTCT	-39519383	True	NA	-25	True	AATAAA	-14	NA	39532748	39529092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39529624_39529819_39529918_39532394_39532524_39532686
transcript_95850.known	chr22	-	861	5	FSM	ENSG00000187051.9	ENST00000420879.5	861	5	0	0	0	0	multi-exon	FALSE	canonical	1	19	junction_2	423.869304739091	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACGACAGCTCCAGGAGTAGG	-39519396	True	NA	-88	True	NA	NA	NA	39532761	39529155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_39529624_39529819_39529918_39530463_39530555_39532394_39532524_39532686
transcript_95852.nic	chr22	+	1052	2	ISM	ENSG00000133477.17	ENST00000473717.1	1917	5	11740	0	11740	0	3prime_fragment	FALSE	canonical	3	130	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAGCCTGGGATCCCAAGTTC	40021417	False	NA	9	True	AATAAA	-21	NA	40021427	40030031	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40021964_40029515
transcript_95857.nic	chr22	+	516	5	ISM	ENSG00000100354.21	ENST00000301923.13	15958	24	-54	89746	-54	-301	5prime_fragment	FALSE	canonical	2	10	junction_1	1.4790199457749	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GGAAGAAAGAGGATAAAAAG	40043594	True	NA	40	True	AAGAAA	-31	NA	40044762	40246061	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114_40156183_40246014
transcript_95858.known	chr22	+	18280	23	FSM	ENSG00000100354.21	ENST00000454349.7	18280	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	21.3100391504812	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTACTATTGTGGTTTCCTG	40170630	True	NA	6	True	AATAAA	-20	NA	40177924	40335808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831_40262174_40264687_40267037_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40281118_40281290_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_9586.known	chr1	-	796	6	FSM	ENSG00000265241.8	ENST00000369307.4	796	6	0	0	0	0	multi-exon	FALSE	canonical	3	401	junction_4	976.461898898262	8582	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGACTGAACTCTATGTAT	-145895525	True	NA	70	True	NA	NA	NA	145927460	145925641	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145925928_145926040_145926178_145926481_145926619_145926808_145926884_145927017_145927078_145927359
transcript_95860.known	chr22	+	415	4	FSM	ENSG00000100354.21	ENST00000441751.5	415	4	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	1.63299316185545	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTGAGTCACAGTTTATTTAA	40043648	True	NA	NA	False	AAGAAA	-8	NA	40044816	40156182	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40044999_40117054_40117129_40125771_40125863_40156114
transcript_95862.nic	chr22	+	1553	4	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-4	72754	-4	16692	5prime_fragment	FALSE	canonical	3	48	junction_2	2.16024689946929	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAGTTGTGAGAGTTTTTAA	40170626	True	NA	NA	False	NA	NA	NA	40177920	40263054	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40178141_40246014_40246103_40251178_40251201_40261831
transcript_95863.nic	chr22	+	861	3	ISM	ENSG00000100354.21	ENST00000454349.7	18280	23	-4	84077	-4	5369	5prime_fragment	FALSE	canonical	3	48	junction_2	2.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTATATGGGTCATGATTGT	40170626	True	NA	NA	False	NA	NA	NA	40177920	40251731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_40178141_40246014_40246103_40251178
transcript_95865.known	chr22	+	564	2	FSM	ENSG00000100354.21	ENST00000489500.1	564	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	191	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTTAGTAGAGATGGGG	40170630	True	NA	NA	False	NA	NA	NA	40177924	40246362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40178141_40246014
transcript_95866.known	chr22	+	3444	24	FSM	ENSG00000100354.21	ENST00000402203.5	3444	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	24.5675643357518	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CGGAGAGAAAAAAAGGTGGG	40045430	False	NA	NA	False	AATAAA	-27	NA	40045473	40323360	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40045589_40117054_40117129_40125771_40125863_40156114_40156183_40246014_40246103_40251178_40251201_40261831_40262174_40270121_40270281_40273424_40273601_40277076_40277152_40277998_40278045_40279994_40280144_40285644_40285771_40300454_40300587_40300909_40301006_40301149_40301334_40308511_40308650_40310816_40310994_40312504_40312652_40312901_40312998_40315282_40315508_40315941_40316013_40321089_40321230_40322853
transcript_95869.nic	chr22	-	1119	6	NIC	ENSG00000196588.21	novel	4522	15	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	64	junction_5	28.1780056072107	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATCTTTGTAAACTCGGGTT	-40632156	True	NA	NA	False	AATAAA	-32	NA	40636719	40429350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_40429768_40431404_40431481_40435498_40435555_40463220_40463287_40552105_40552368_40636477
transcript_9587.known	chr1	+	1178	8	FSM	ENSG00000121851.13	ENST00000369314.2	1178	8	0	0	0	0	multi-exon	FALSE	canonical	3	63	junction_4	8.05339325111737	526	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTGTTGTGGGTGAGGCC	145963976	True	NA	16	True	AATAAA	-16	NA	145964689	145978848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_145964769_145974824_145974992_145975306_145975437_145977083_145977153_145977482_145977540_145977777_145977852_145977982_145978097_145978360
transcript_95872.known	chr22	-	531	3	FSM	ENSG00000196588.21	ENST00000463769.7	531	3	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_2	20.5	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATGCCGCGTAAGTGCCTCTC	-40632124	True	NA	NA	False	NA	NA	NA	40636687	40463227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40463287_40552105_40552368_40636477
transcript_95874.known	chr22	+	2986	22	FSM	ENSG00000100359.21	ENST00000248929.14	2986	22	0	0	0	0	multi-exon	TRUE	canonical	3	291	junction_19	44.7005658752678	82	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTTTTTGTGTTTATTTT	40364536	True	NA	9	True	NA	NA	NA	40370593	40410289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40370689_40400695_40400814_40401592_40401676_40402138_40402206_40404246_40404456_40404556_40404665_40405140_40405285_40405648_40405845_40406077_40406224_40406437_40406663_40407016_40407072_40407200_40407329_40407412_40407569_40407788_40407844_40408070_40408121_40408276_40408430_40408626_40408698_40408793_40408843_40408932_40409019_40409249_40409373_40409464_40409526_40409681
transcript_9588.known	chr1	-	1632	4	FSM	ENSG00000131779.11	ENST00000537888.1	1632	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	56.8057117628931	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACATTTGGTCTGGTCCCTCA	-145886594	False	NA	-3	True	ATTAAA	-18	NA	145918529	145911350	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145912567_145916816_145917019_145917700_145917817_145918431
transcript_9589.known	chr1	-	2905	8	FSM	ENSG00000265972.6	ENST00000582401.6	2905	8	0	0	0	0	multi-exon	TRUE	canonical	3	86	junction_5	13.0587370080302	96	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCTGTGAGATGGCTTTGG	-145995869	True	NA	NA	False	AATAAA	-23	NA	145996579	145992434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_145993887_145994015_145994168_145994280_145994438_145994543_145994801_145994928_145995032_145995143_145995292_145995403_145995477_145996016
transcript_95902.known	chr22	+	1808	12	FSM	ENSG00000239900.14	ENST00000342312.9	1808	12	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_11	315.301718285389	659	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAACCAAACCCTGATGTGAC	40335243	True	NA	NA	False	AGTAAA	-23	NA	40346502	40366996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435
transcript_95903.known	chr22	+	4372	12	FSM	ENSG00000239900.14	ENST00000679723.1	4372	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_2	358.500273753022	509	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TATATAAAATATACATTCAT	40335240	True	NA	68	True	ATTAAA	-17	NA	40346499	40369425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_95904.known	chr22	+	1336	10	FSM	ENSG00000239900.14	ENST00000623632.4	1336	10	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_7	390.808784666926	669	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTAAATTAGTACAGCACT	NA	False	NA	74	True	NA	NA	NA	40346460	40366614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40364275_40364366_40364879_40365057_40366435
transcript_95905.known	chr22	+	1805	11	FSM	ENSG00000239900.14	ENST00000623287.4	1805	11	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	378.089407415759	499	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	AGTAAATACTTAAAAAAAAA	40335270	True	NA	NA	False	NA	NA	NA	40346529	40366968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435
transcript_95906.known	chr22	+	1859	14	FSM	ENSG00000239900.14	ENST00000680978.1	1859	14	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_13	332.748567942006	259	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	40335240	True	NA	-41	True	NA	NA	NA	40346499	40367837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40364879_40365057_40366435_40366499_40367468
transcript_95907.known	chr22	+	1682	13	FSM	ENSG00000239900.14	ENST00000637666.2	1682	13	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_12	433.9480495661	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTCCTAAACTAGAGGAAAAA	40335240	True	NA	-41	True	NA	NA	NA	40346499	40367837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40346712_40349831_40350036_40353072_40353118_40354247_40354328_40358863_40359036_40359259_40359307_40360401_40360493_40361272_40361343_40361487_40361636_40362980_40363072_40364275_40364366_40366435_40366499_40367468
transcript_95908.known	chr22	+	2851	2	FSM	ENSG00000128285.5	ENST00000249016.5	2115	2	-734	-2	-523	2	multi-exon	FALSE	canonical	2	5	junction_1	0	41	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTGGATGTTCTTGTG	NA	False	NA	17	True	AATAAA	-29	NA	40678749	40682814	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40679735_40680948
transcript_95913.known	chr22	-	1243	7	FSM	ENSG00000100372.15	ENST00000447566.5	1243	7	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_6	147.203562758817	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCAGCTGTTCTCTTTCCCTG	-40814926	True	NA	33	True	AATATA	-1	NA	40819350	40770488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40819194
transcript_95921.known	chr22	-	2226	9	FSM	ENSG00000100372.15	ENST00000435456.7	2226	9	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_7	28.66372925842	373	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814922	True	NA	-2	True	ATTAAA	-18	NA	40819346	40769629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40792524_40792677_40794513_40794581_40799022_40799084_40819194
transcript_95922.known	chr22	-	2058	8	FSM	ENSG00000100372.15	ENST00000263255.10	2058	8	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_5	138.416997894487	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814906	True	NA	-2	True	ATTAAA	-18	NA	40819330	40769629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40794513_40794581_40799022_40799084_40819194
transcript_95923.known	chr22	-	2060	7	FSM	ENSG00000100372.15	ENST00000544408.5	2060	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	141.236700455496	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGGAGTCGTATGTCATCTT	-40814975	True	NA	-2	True	ATTAAA	-18	NA	40819399	40769629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40770982_40773936_40774020_40777039_40777136_40777227_40777374_40779008_40779126_40799022_40799084_40819194
transcript_95935.known	chr22	-	3212	12	FSM	ENSG00000100380.15	ENST00000216218.8	3212	12	0	0	0	0	multi-exon	FALSE	canonical	3	1968	junction_3	105.175414278219	3859	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTCTAAACCAGAAATGTT	-40815535	True	NA	-5	True	AATATA	-22	NA	40856639	40824534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_40826667_40827095_40827230_40829625_40829675_40830839_40830957_40832568_40832672_40835559_40835671_40835802_40835888_40840625_40840693_40844838_40844910_40848293_40848370_40850822_40850881_40856430
transcript_95936.known	chr22	+	7938	10	FSM	ENSG00000196236.13	ENST00000357137.9	7938	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	10.4774890970011	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGAGGGGTATGGTGTGTGT	40853287	True	NA	NA	False	AATAAA	-15	NA	40857147	40932815	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40907586_40907650_40909121_40909236_40914238_40914325_40922332_40922514_40924361_40924483_40926268
transcript_95940.nnic	chr22	+	1170	5	NNC	ENSG00000196236.13	novel	7938	10	NA	NA	-11	6766	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_4	26.0612259880459	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTGTGTTCAAGTCTCT	40853205	True	NA	NA	False	NA	NA	NA	40857065	40888690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_40857246_40868998_40869116_40881769_40882178_40886312_40886516_40888428
transcript_95942.known	chr22	+	1418	3	FSM	ENSG00000196236.13	ENST00000482652.1	1418	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	6	341	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTCACTGTATAATTATTG	40853236	True	NA	28	True	ATTAAA	-25	NA	40857096	40862770	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_40857246_40860677_40860794_40861617
transcript_95944.nnic	chr22	+	405	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	-24	-941	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACCTCGTATGCCTCAGCTA	40853192	True	NA	16	True	CATAAA	-26	NA	40857052	40861829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_40857246_40861617
transcript_95945.nnic	chr22	+	1348	2	NIC	ENSG00000196236.13	novel	1418	3	NA	NA	-24	2	combination_of_known_splicesites	FALSE	canonical	3	24	junction_1	0	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCACTGTATAATTATTGAT	40853192	True	NA	30	True	ATTAAA	-27	NA	40857052	40862772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_40857246_40861617
transcript_9597.nnic	chr1	-	1188	5	FSM	ENSG00000264343.7	ENST00000687833.1	1135	5	-32	-21	-32	21	multi-exon	FALSE	canonical	3	30	junction_4	30.6022874961987	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTATGTGCTTGTGCTTTTGC	NA	False	NA	NA	False	AATAAA	-45	NA	146229073	146156076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189374_146228708
transcript_9598.known	chr1	-	1874	5	FSM	ENSG00000264343.7	ENST00000362074.7	1874	5	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_4	20.0062490237426	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCAACTGGTAATTTATTCAT	-146228081	True	NA	NA	False	ATTAAA	-28	NA	146229026	146155351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_146156230_146156479_146156816_146164750_146165011_146189299_146189382_146228708
transcript_95982.nnic	chr22	-	1385	3	NNC	ENSG00000231993.1	novel	457	3	NA	NA	-52	-10623	at_least_one_novel_splicesite	FALSE	canonical	3	11	junction_1	5	18	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGGATTTATTTCTGGA	-41197123	True	NA	-27	True	TATAAA	-19	NA	41197508	41185213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_41186324_41195481_41195522_41197273
transcript_95984.known	chr22	+	3282	18	FSM	ENSG00000100395.15	ENST00000452106.5	3282	18	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_14	73.9308570645409	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	41202773	True	NA	12	True	ATTAAA	-17	NA	41205323	41231271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227574_41227680_41227803_41227870_41229539_41229657_41230138
transcript_95985.known	chr22	+	3189	17	FSM	ENSG00000100395.15	ENST00000216237.10	3189	17	0	0	0	0	multi-exon	TRUE	canonical	3	181	junction_3	21.0916897141979	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCCGTTTGTTAGATCTCT	41202761	True	NA	12	True	ATTAAA	-17	NA	41205311	41231271	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41205387_41209695_41209934_41213892_41214027_41216138_41216263_41217122_41217203_41219418_41219537_41220733_41220869_41221198_41221288_41224019_41224252_41224724_41224802_41224966_41225072_41225793_41225942_41226661_41226745_41227088_41227324_41227803_41227870_41229539_41229657_41230138
transcript_95986.known	chr22	-	2530	6	FSM	ENSG00000100399.16	ENST00000216241.14	2530	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	3.91918358845308	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATTAGGGTTGTATTTAGG	-41240908	False	NA	-2	True	AATAAA	-17	NA	41240931	41229512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41229731_41235144_41235344_41236483_41236651_41237175_41238886_41239442_41239621_41240873
transcript_95991.known	chr22	-	3828	16	FSM	ENSG00000100401.20	ENST00000356244.8	3828	16	0	0	0	0	multi-exon	FALSE	canonical	3	738	junction_15	65.4297248113492	188	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATGTATTAATATAT	-41279838	True	NA	-1	True	CATAAA	-17	NA	41286187	41244778	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41285985
transcript_95992.nnic	chr22	-	2919	16	NNC	ENSG00000100401.20	novel	3469	17	NA	NA	-23	0	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_15	213.512050141334	129	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAGACTCAGAAACTCTCACT	-41279861	True	NA	-17	True	AATAAA	-18	NA	41286210	41245610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_41246673_41249329_41249452_41249728_41249818_41251006_41251110_41252871_41252992_41254307_41254495_41256020_41256106_41256190_41256291_41256710_41256825_41257947_41258107_41261445_41261581_41264663_41264844_41268096_41268157_41274599_41274728_41280932_41281083_41286085
transcript_95998.nic	chr22	+	1557	9	ISM	ENSG00000100403.12	ENST00000352645.5	5906	23	-40	20509	-40	2795	5prime_fragment	FALSE	canonical	3	12	junction_4	6.58478359553296	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAATGAAGCTGCACAATGT	41292179	True	NA	NA	False	NA	NA	NA	41301484	41339638	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000
transcript_96002.known	chr22	+	5906	23	FSM	ENSG00000100403.12	ENST00000352645.5	5906	23	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_4	5.86786316999793	173	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTCTGTCCCCGAGATGTCA	41292219	True	NA	4	True	AATAAA	-15	NA	41301524	41360147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41301773_41320654_41320714_41325563_41325598_41325720_41325919_41327205_41327365_41330022_41330104_41332170_41332228_41338312_41338356_41339000_41339192_41339815_41340138_41341087_41341147_41342528_41342629_41343414_41343577_41346002_41346209_41348066_41348168_41349119_41349302_41351560_41351647_41355468_41355603_41355756_41355863_41355953_41356063_41356342_41356477_41356644_41356809_41357176
transcript_96003.known	chr22	-	4337	2	FSM	ENSG00000183864.5	ENST00000327492.4	4337	2	0	0	0	0	multi-exon	FALSE	canonical	3	150	junction_1	0	83	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCTTCTGCCTGCTCCTGGC	-41442374	True	NA	-7	True	ATTAAA	-17	NA	41446801	41433493	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41437408_41446378
transcript_96005.known	chr22	+	2734	18	FSM	ENSG00000100412.17	ENST00000216254.9	2734	18	0	0	0	0	multi-exon	FALSE	canonical	3	488	junction_7	45.1025743670234	470	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGACTGTTCTGTGAGTGAT	41467123	True	NA	18	True	AAAACA	-15	NA	41469116	41528974	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_96007.known	chr22	+	3037	18	FSM	ENSG00000100412.17	ENST00000677532.1	3037	18	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	178.672188280806	242	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCCAGGGCTAGTTGCTGG	41467143	True	NA	NA	False	NA	NA	NA	41469136	41529273	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41469183_41469347_41469509_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41522829_41522988_41523204_41523279_41523829_41523942_41524845_41524969_41525192_41525349_41526261_41526454_41527287_41527421_41527900_41528023_41528478
transcript_9601.known	chr1	+	164	1	FSM	ENSG00000273768.1	ENST00000615842.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTTTTGTAGTTTAAAGAAC	NA	False	NA	NA	False	NA	NA	NA	146376806	146376970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_146376800_146377000
transcript_96010.known	chr22	+	1460	10	FSM	ENSG00000100412.17	ENST00000466237.2	1460	10	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_9	160.561591582041	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATGTGAAAAGAGATTTCTA	41467123	True	NA	17	True	AATAAA	-32	NA	41469116	41521590	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41469183_41499725_41499863_41507790_41508050_41511875_41511969_41515376_41515536_41515766_41515918_41517526_41517632_41518480_41518573_41520170_41520277_41521298
transcript_96014.known	chr22	-	4176	7	FSM	ENSG00000100413.17	ENST00000396504.6	4176	7	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_6	99.7542814452927	292	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAAGGCTTGTTTTTGGTC	-41540751	True	NA	-5	True	AATAAA	-35	NA	41544489	41525803	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544427
transcript_96015.known	chr22	-	802	7	FSM	ENSG00000100413.17	ENST00000407461.5	802	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	112.043766250316	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGAGGCCGATGCTAAGGAG	NA	False	NA	NA	False	NA	NA	NA	41544606	41529211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41529337_41530686_41530889_41532093_41532158_41532658_41532746_41540698_41540796_41543990_41544122_41544510
transcript_9602.known	chr1	+	668	2	FSM	ENSG00000287978.1	ENST00000660431.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	2	18	junction_1	0	186	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGTCTCTTTGTTCTCCT	146387129	True	NA	8	True	AATAAA	-18	NA	146387201	146388092	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_146387323_146387545
transcript_96027.known	chr22	-	292	4	FSM	ENSG00000100410.8	ENST00000491254.1	292	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_3	332.808586961868	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGAACGCAAAAAATACGGCT	-41468483	False	NA	NA	False	NA	NA	NA	41468499	41460431	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468454
transcript_96030.known	chr22	-	1053	4	FSM	ENSG00000100410.8	ENST00000216252.4	1053	4	0	0	0	0	multi-exon	FALSE	canonical	3	639	junction_3	42.055518860985	5836	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACCTTCCCCATTTAACT	-41453041	True	NA	-22	True	AATAAA	-22	NA	41468692	41459716	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41460488_41467447_41467615_41468123_41468148_41468601
transcript_96031.known	chr22	-	365	2	FSM	ENSG00000286491.2	ENST00000664614.2	399	2	27	7	27	-7	multi-exon	FALSE	canonical	1	1	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCGGGTGGAGTGGTACGT	NA	False	NA	NA	False	AATAAA	-14	NA	41560905	41551709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41551889_41560719
transcript_96035.known	chr22	-	1242	8	FSM	ENSG00000100417.12	ENST00000216259.8	1242	8	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_5	11.9965981572669	355	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-41588826	True	NA	-25	True	ATTAAA	-15	NA	41589840	41576899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584280_41584373_41584526_41584604_41586075_41586194_41589718
transcript_96040.known	chr22	-	1576	8	FSM	ENSG00000100417.12	ENST00000472620.5	1576	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	38.1002972831082	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGTCACAGTATTAAAGTT	-41589861	False	NA	-56	True	NA	NA	NA	41589871	41576930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589051_41589164_41589718
transcript_96044.nnic	chr22	-	1184	7	NIC	ENSG00000100417.12	novel	1242	8	NA	NA	-3	0	combination_of_known_splicesites	FALSE	canonical	3	7	junction_4	30.523215208537	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGGTGTCAGCTGTGTCTG	-41589864	False	NA	-25	True	ATTAAA	-15	NA	41589874	41576899	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584059_41584526_41584604_41586075_41586194_41589718
transcript_96045.known	chr22	-	1405	7	FSM	ENSG00000100417.12	ENST00000485648.5	1405	7	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_4	12.7104506432917	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGAACTTTGTCACAGTATT	-41588804	True	NA	-62	True	NA	NA	NA	41589818	41576936	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41577441_41577807_41577924_41578805_41578882_41583958_41584373_41584526_41584604_41586075_41586194_41589718
transcript_96051.known	chr22	+	2530	4	FSM	ENSG00000172346.15	ENST00000306149.12	2530	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_2	2.62466929133727	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGGCCTGAAGCTGCCTCT	41560844	True	NA	10	True	AATAAA	-19	NA	41561009	41576666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41561184_41571842_41572142_41573654_41573778_41574732
transcript_96054.known	chr22	-	3780	6	FSM	ENSG00000100418.8	ENST00000263256.7	3780	6	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_4	19.2083315256688	331	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTGTGGTGCCTGAATCA	-41616672	True	NA	0	True	AATAAA	-20	NA	41621043	41598027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41601191_41603258_41603382_41604043_41604154_41607261_41607332_41607839_41607862_41620751
transcript_96063.known	chr22	+	2200	13	FSM	ENSG00000196419.13	ENST00000405878.5	2200	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1528.91292853961	2293	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559406	False	NA	14	True	AATAAA	-20	NA	41621460	41664039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41621592_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_96066.known	chr22	+	2122	13	FSM	ENSG00000196419.13	ENST00000360079.8	2122	13	0	0	0	0	multi-exon	FALSE	canonical	3	4155	junction_1	452.760575678679	10353	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TACTGTTCTTTTGTGTGAAG	41559240	True	NA	16	True	AATAAA	-22	NA	41621294	41664041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_96067.known	chr22	+	2709	12	FSM	ENSG00000196419.13	ENST00000359308.8	2709	12	0	0	0	0	multi-exon	FALSE	canonical	3	4868	junction_3	294.393367020139	2401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATACTGTTCTTTTGTGTGA	41559295	True	NA	14	True	AATAAA	-20	NA	41621349	41664039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41622087_41628117_41628231_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_96068.known	chr22	+	2006	13	FSM	ENSG00000196419.13	ENST00000402580.7	2006	13	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	1520.79093091574	1296	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTGTGTGAAGGAGAAAG	41559240	True	NA	23	True	AATAAA	-29	NA	41621294	41664048	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41621346_41621989_41622087_41628117_41628231_41636235_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_96069.known	chr22	+	1958	11	FSM	ENSG00000196419.13	ENST00000405506.2	1958	11	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	1601.94381923961	612	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTATATACTGTTCTTTTG	41621795	False	NA	9	True	AATAAA	-15	NA	41621982	41664034	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41622087_41636112_41636252_41636515_41636771_41637607_41637792_41646895_41647083_41650722_41650892_41653528_41653691_41656902_41657033_41658251_41658353_41661330_41661445_41663621
transcript_96072.known	chr22	-	1036	4	FSM	ENSG00000100138.15	ENST00000648674.1	1036	4	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_3	1146.43573255935	2737	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATCTGGTTCCAGCTTTCAG	-41665757	True	NA	-113	True	NA	NA	NA	41688895	41674614	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41675196_41680243_41680365_41682355_41682588_41688793
transcript_96086.known	chr22	-	640	2	FSM	ENSG00000100138.15	ENST00000469522.1	640	2	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCCTGATGCTTGGTACAGA	-41665709	True	NA	-22	True	AATAAA	-17	NA	41688847	41687741	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41688328_41688793
transcript_96087.known	chr22	-	1458	3	FSM	ENSG00000100138.15	ENST00000401959.6	1458	3	0	0	0	0	multi-exon	FALSE	canonical	3	2157	junction_2	302	12855	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GAATGGCAGTGCCTGATTCT	-41665729	True	NA	-7	True	AATAAA	-21	NA	41688867	41673932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41675196_41680243_41680365_41688793
transcript_96089.known	chr22	+	7135	7	FSM	ENSG00000100147.14	ENST00000255784.6	7135	7	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_5	9.42956343987709	137	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTTTAATGATCCCATGGTA	41797623	True	NA	11	True	AATAAA	-20	NA	41800678	41832164	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41800767_41808874_41808994_41809878_41810001_41810206_41810292_41813263_41813446_41813750_41813823_41825697
transcript_96091.nic	chr22	+	1899	4	ISM	ENSG00000198911.12	ENST00000361204.9	5237	19	9	35395	9	-5456	5prime_fragment	FALSE	canonical	3	820	junction_3	40.185680147148	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAGCTACTGATGCATGAA	41813295	True	NA	NA	False	NA	NA	NA	41833113	41871910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888
transcript_96094.known	chr22	+	5237	19	FSM	ENSG00000198911.12	ENST00000361204.9	5237	19	0	0	0	0	multi-exon	FALSE	canonical	3	719	junction_9	64.7199093530474	332	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACGAGGTGTGTGAGGGTC	41813286	True	NA	18	True	AATAAA	-20	NA	41833104	41907305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_41833359_41866830_41867281_41868610_41868793_41870888_41871036_41873797_41874020_41875336_41875452_41875542_41875725_41877228_41877422_41877941_41878124_41880715_41880993_41884841_41885012_41893116_41893286_41894819_41894938_41897051_41897162_41898648_41898782_41900329_41900499_41902969_41903156_41904862_41904975_41905439
transcript_961.known	chr1	-	704	4	FSM	ENSG00000127054.22	ENST00000490853.5	704	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	228.948805534241	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGGCGAGGCCAACTTCTTCA	-1318726	True	NA	NA	False	NA	NA	NA	1324649	1319380	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319844_1320455_1320530_1320995_1321094_1324580
transcript_96102.known	chr22	-	938	6	FSM	ENSG00000100162.15	ENST00000215980.10	938	6	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	18.0510387512741	3834	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940829	True	NA	-19	True	AAAAAG	-12	NA	41947152	41938736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_96103.known	chr22	-	818	5	FSM	ENSG00000100162.15	ENST00000407253.7	818	5	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	245.549765831694	349	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTTTAAAAATCACTGGTCTC	-41940813	True	NA	-31	True	NA	NA	NA	41947136	41938748	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416_41946497_41947019
transcript_96104.known	chr22	-	1002	5	FSM	ENSG00000100162.15	ENST00000402338.5	1002	5	0	0	0	0	multi-exon	FALSE	canonical	3	571	junction_2	19.4550764583437	267	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940370	False	NA	-19	True	AAAAAG	-12	NA	41946693	41938736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41943609_41943702_41945224_41945305_41945912_41946006_41946416
transcript_96105.known	chr22	-	905	4	FSM	ENSG00000100162.15	ENST00000404067.5	905	4	0	0	0	0	multi-exon	FALSE	canonical	3	48	junction_1	267.08841648829	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGGTCTCATTCACCACTTT	-41940365	False	NA	-19	True	AAAAAG	-12	NA	41946688	41938736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41939197_41945224_41945305_41945912_41946006_41946416
transcript_96106.known	chr22	-	689	4	FSM	ENSG00000100162.15	ENST00000396437.3	689	4	0	0	0	0	multi-exon	FALSE	canonical	3	609	junction_2	4.54606056566195	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GAACACATATACACATACTT	-41940828	True	NA	NA	False	AATAAA	-22	NA	41947151	41944920	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_41945305_41945912_41946006_41946416_41946497_41947019
transcript_96107.known	chr22	-	1856	10	FSM	ENSG00000198951.12	ENST00000403363.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_9	56.7211067471121	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-42070820	False	NA	-34	True	NA	NA	NA	42070830	42059795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070367_42070762
transcript_96108.known	chr22	-	1869	10	FSM	ENSG00000198951.12	ENST00000402937.1	1869	10	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_9	60.1128568241067	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTCCCTCAGGTCACCAATA	-42070832	False	NA	-40	True	NA	NA	NA	42070842	42059801	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281_42070374_42070762
transcript_96110.known	chr22	-	3696	9	FSM	ENSG00000198951.12	ENST00000396398.8	3696	9	0	0	0	0	multi-exon	FALSE	canonical	3	184	junction_2	11.9732775379175	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTCTTCCTGCACATGCT	-42069774	True	NA	22	True	NA	NA	NA	42070812	42058333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42067764_42067937_42068438_42068575_42070281
transcript_96111.nnic	chr22	-	2040	8	NIC	ENSG00000198951.12	novel	1856	10	NA	NA	22	0	intron_retention	FALSE	canonical	3	9	junction_6	68.3747178481661	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCAGGTCACCAATAAACCTG	-42069752	True	NA	-34	True	NA	NA	NA	42070790	42059795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_42060414_42060923_42061068_42062826_42063025_42065737_42065900_42066709_42066805_42067112_42067291_42068438_42068575_42070281
transcript_96113.known	chr22	+	540	1	FSM	ENSG00000286659.1	ENST00000662963.1	540	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	33	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCATAATAGATTGATTTACT	42070883	True	NA	NA	False	AATAAA	-22	NA	42070948	42071488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42070900_42071500
transcript_96114.known	chr22	+	2335	3	FSM	ENSG00000177096.9	ENST00000321753.8	2335	3	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_1	7	50	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCCTTCCGCTCCCTGGGTT	42073794	True	NA	8	True	AGTAAA	-16	NA	42074247	42079438	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42074342_42075570_42075653_42077279
transcript_96118.known	chr22	+	1562	3	FSM	ENSG00000183172.9	ENST00000331479.4	1562	3	0	0	0	0	multi-exon	FALSE	canonical	3	675	junction_2	10	6283	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAAGTGTTCCTCTGAGTT	42079246	False	NA	NA	False	AATAAA	-13	NA	42079699	42084284	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42079955_42081924_42082066_42083118
transcript_96122.known	chr22	+	591	3	FSM	ENSG00000183172.9	ENST00000422252.1	591	3	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_1	318	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCGTGCGTGACTGAGTGAT	42079237	False	NA	6	True	AATAAA	-15	NA	42079690	42083353	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42079906_42081924_42082066_42083118
transcript_96138.known	chr22	-	1183	3	FSM	ENSG00000184983.11	ENST00000617763.1	1183	3	0	0	0	0	multi-exon	FALSE	canonical	3	4072	junction_1	288.5	20102	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCTCTGTTTGGATGGTGGT	NA	False	NA	-1	True	AATAAA	-24	NA	42090884	42085526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42086315_42087059_42087176_42090605
transcript_96140.nic	chr22	+	826	5	NIC	ENSG00000237037.9	novel	774	5	NA	NA	10	0	combination_of_known_junctions	FALSE	canonical	3	4	junction_3	3.04138126514911	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAGGCCAGGCTGCCACCTTT	NA	False	NA	NA	False	AATAAA	-21	NA	42090940	42125028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_42091182_42091296_42091601_42124046_42124131_42124519_42124563_42124874
transcript_96144.nnic	chr22	+	534	4	Fusion	ENSG00000183172.9_ENSG00000237037.9	novel	1562	3	NA	NA	0	128	multi-exon	FALSE	canonical	0	0	junction_1	4.98887651569859	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATAGGCCAGGCTGCCACCT	42079246	False	NA	NA	False	AATAAA	-19	NA	42079699	42137178	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr22_+_42079955_42136198_42136283_42136671_42136715_42137026
transcript_96145.known	chr22	+	1521	4	FSM	ENSG00000237037.9	ENST00000417327.5	1521	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	2.62466929133727	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GAGTGTCTGTGGTTCTCTGT	NA	False	NA	NA	False	NA	NA	NA	42090955	42125349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42091182_42091296_42091601_42124046_42124563_42124874
transcript_96150.known	chr22	-	475	2	FSM	ENSG00000229891.3	ENST00000412060.1	475	2	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	0	32	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTGTTCCATTTCT	-42368550	True	NA	-14	True	AATAAA	-16	NA	42369208	42364401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42364726_42369057
transcript_96152.known	chr22	+	1346	11	FSM	ENSG00000172250.17	ENST00000359906.7	1385	11	37	2	11	0	multi-exon	FALSE	canonical	2	5	junction_7	3.55527776692624	21	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTCG	42500435	True	NA	NA	False	AATAAA	-18	NA	42500589	42512560	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42500693_42501624_42501775_42501918_42502033_42502350_42502393_42502748_42502769_42503198_42503274_42505032_42505143_42509027_42509111_42510630_42510725_42511815_42511928_42512117
transcript_9616.nnic	chr1	+	982	5	Fusion	ENSG00000289321.1_ENSG00000276975.3	novel	1288	8	NA	NA	336	251	multi-exon	FALSE	canonical	0	0	junction_4	5.2618912949623	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCCTCTTGTGTGTTGTGCTT	146486810	False	NA	NA	False	ATTAAA	-18	NA	146486985	146525542	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_146487521_146505330_146505413_146516252_146516447_146524727_146524854_146525497
transcript_96170.known	chr22	-	5419	7	FSM	ENSG00000189306.11	ENST00000323013.7	5419	7	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_4	411.459495778949	2420	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATAGAACCTTTTTTTTT	-42506293	True	NA	-7	True	AATAAA	-14	NA	42519796	42508343	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42512996_42514105_42514305_42514681_42514780_42515150_42515269_42516010_42516137_42518004_42518148_42519713
transcript_96171.known	chr22	+	1337	12	FSM	ENSG00000183569.18	ENST00000327678.10	1337	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	6.43852043986392	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCTTTTGAGGCTTTTTTG	42553801	True	NA	NA	False	AATAAA	-18	NA	42553955	42574382	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_42554043_42554937_42555088_42555231_42555346_42555663_42555706_42556063_42556084_42556513_42556589_42558347_42558458_42560185_42560266_42566303_42566339_42571120_42571204_42572435_42572530_42573935
transcript_96183.known	chr22	-	2375	8	FSM	ENSG00000182841.13	ENST00000357802.7	2387	8	1	11	0	-11	multi-exon	FALSE	canonical	3	109	junction_1	334.148262339474	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGAAGCGGGTTGGAGGGT	-42578430	True	NA	NA	False	AATAAA	-13	NA	42582038	42555222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42556675_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_96187.nnic	chr22	-	1036	8	NNC	ENSG00000182841.13	novel	2359	7	NA	NA	-1	1471	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	344.023610960003	182	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCCGTGTCAGTGCTTCGTT	-42578432	True	NA	0	True	TTTAAA	-18	NA	42582040	42571772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_42571884_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_96188.nnic	chr22	-	976	8	NNC	ENSG00000182841.13	novel	2359	7	NA	NA	-1	1411	at_least_one_novel_splicesite	FALSE	canonical	3	38	junction_1	344.023610960003	63	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACGGTTGTGTCTGAATTCG	-42578432	True	NA	-1	True	NA	NA	NA	42582040	42571832	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_42571884_42574679_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_96199.known	chr22	-	833	7	FSM	ENSG00000182841.13	ENST00000458605.6	2359	7	37	1489	-4	-353	multi-exon	FALSE	canonical	3	185	junction_5	335.853473341509	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCGTGAGAGCCGCAGTGGA	-42578393	True	NA	NA	False	NA	NA	NA	42582001	42574732	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42574819_42575930_42576127_42576511_42576610_42576980_42577099_42577843_42577963_42580216_42580360_42581928
transcript_96205.nnic	chr22	-	515	3	NNC	ENSG00000100227.19	novel	3337	9	NA	NA	-3	-5967	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0.5	22	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCATCTTGGTGGTCCTTCCT	-42603100	True	NA	-2	True	GATAAA	-15	NA	42614965	42608734	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_42608963_42612541_42612662_42614798
transcript_96207.known	chr22	-	3323	8	FSM	ENSG00000100227.19	ENST00000348657.6	3323	8	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_6	166.483559278999	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGAGTTATCTTTTTTT	-42603066	True	NA	-6	True	AATAAA	-16	NA	42614931	42583720	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42602769_42603161_42614798
transcript_96208.known	chr22	-	3491	9	FSM	ENSG00000100227.19	ENST00000451060.6	3491	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	205.199293371103	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCTTTGAGTTATCTTTTTT	-42603097	True	NA	-7	True	AATAAA	-15	NA	42614962	42583721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42585969_42587505_42587573_42591954_42592085_42595536_42595615_42596185_42596366_42599697_42599794_42601969_42602108_42602769_42603161_42614798
transcript_96210.known	chr22	-	2916	9	FSM	ENSG00000100243.22	ENST00000352397.10	2916	9	0	0	0	0	multi-exon	FALSE	canonical	3	1554	junction_8	91.8925153372134	305	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGAAGAAGATAGGTGGCTG	-42639713	True	NA	-2	True	AATAAA	-15	NA	42649392	42617839	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714_42636847_42649294
transcript_96211.known	chr22	-	1849	8	ISM	ENSG00000100243.22	ENST00000688117.1	2094	9	7744	44	-44	-7	3prime_fragment	FALSE	canonical	3	1600	junction_1	77.1925765702313	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	ATGAGCAGAAAAAAAAAAAG	NA	False	NA	-49	True	NA	NA	NA	42636890	42618852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_42619946_42623788_42623889_42627303_42627390_42627604_42627689_42628151_42628282_42630881_42630989_42631377_42631451_42636714
transcript_96212.known	chr22	-	1956	3	FSM	ENSG00000128274.17	ENST00000381278.4	1956	3	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	16.5	143	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACTTCGGGCCTTGTGATTGG	-42719634	True	NA	-15	True	AATAAA	-15	NA	42720819	42692121	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42693998_42695574_42695632_42720796
transcript_96213.known	chr22	-	2092	3	FSM	ENSG00000128274.17	ENST00000642412.2	2092	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	6.5	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCGGGCCTTGTGATTGGT	-42719685	True	NA	-14	True	AATAAA	-16	NA	42720870	42692120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42693998_42695490_42695632_42720796
transcript_96215.known	chr22	-	407	2	FSM	ENSG00000128274.17	ENST00000647439.1	407	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTCTGTATTTGCATATCT	-42719677	True	NA	NA	False	AATAAA	-25	NA	42720862	42718245	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42718587_42720796
transcript_96216.known	chr22	-	3251	11	FSM	ENSG00000100266.19	ENST00000263246.8	3251	11	0	0	0	0	multi-exon	FALSE	canonical	3	409	junction_5	34.5637092916834	512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-43007308	True	NA	-18	True	AATAAA	-17	NA	43015149	42869772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_42912020_42912158_43015020
transcript_96218.nnic	chr22	-	3118	10	NIC	ENSG00000100266.19	novel	3251	11	NA	NA	-4	0	combination_of_known_splicesites	FALSE	canonical	3	61	junction_9	128.801982194701	450	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGGAAGTCCCTTCGCCAT	-43007312	True	NA	-18	True	AATAAA	-17	NA	43015153	42869772	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_42871470_42876136_42876334_42876887_42877011_42879047_42879170_42882183_42882305_42884385_42884562_42888642_42888799_42890946_42891183_42893456_42893614_43015020
transcript_9622.known	chr1	-	5343	8	FSM	ENSG00000131791.8	ENST00000254101.4	5343	8	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_7	25.0363001765559	64	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATCTGAGTTATTGATTGAT	-147172409	False	773	NA	False	AATAAA	-19	NA	147172470	147155105	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147159643_147161711_147161781_147162439_147162574_147166497_147166619_147166845_147166940_147167766_147167934_147171988_147172168_147172428
transcript_96221.known	chr22	-	2728	16	FSM	ENSG00000242247.11	ENST00000263245.10	2728	16	0	0	0	0	multi-exon	FALSE	canonical	3	81	junction_5	17.899224067602	172	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-42855786	True	NA	3	True	AATAAA	-41	NA	42857273	42796501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42810812_42810945_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_96222.nic	chr22	-	2617	15	NIC	ENSG00000242247.11	novel	2728	16	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	3	29	junction_4	28.9352725924606	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCTTTCGTAATAAGTCATCG	-42855807	True	NA	3	True	AATAAA	-41	NA	42857294	42796501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_-_42797606_42799038_42799161_42807072_42807164_42808766_42808891_42817141_42817265_42817728_42817858_42822269_42822410_42823655_42823703_42826939_42827000_42831548_42831637_42834241_42834326_42835361_42835494_42840943_42841017_42847513_42847633_42857113
transcript_96225.known	chr22	-	1683	12	FSM	ENSG00000100271.17	ENST00000440761.1	1683	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	31.1373921528866	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATAAACGAAGGCACTTCTT	-43087994	True	NA	-30	True	NA	NA	NA	43089419	43039668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43070170_43070243_43075473_43075591_43079901_43079987_43089276
transcript_96229.known	chr22	-	1736	11	FSM	ENSG00000100271.17	ENST00000266254.12	1736	11	0	0	0	0	multi-exon	FALSE	canonical	3	66	junction_7	8.49470423263812	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAACAGCTTCAAGCATGTA	-43087966	True	NA	NA	False	ATTAAA	-22	NA	43089391	43039515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079901_43079987_43089276
transcript_96230.nnic	chr22	-	1592	11	NNC	ENSG00000100271.17	novel	1683	12	NA	NA	2	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_9	24.0790365255755	14	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTTATGGAGTCTGTTTGAC	-43087992	True	NA	-5	True	AATAAA	-20	NA	43089417	43039643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_43039906_43046409_43046574_43051800_43051888_43059383_43059528_43063812_43063922_43064189_43064325_43068409_43068591_43069635_43069845_43075473_43075591_43079943_43079987_43089276
transcript_96234.nnic	chr22	-	515	4	NNC	ENSG00000100271.17	novel	1736	11	NA	NA	2	-34726	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	41.7079795189788	7	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAGTGTAATAGTCTTGGCTA	-43087992	True	NA	NA	False	AAAAAG	-7	NA	43089417	43074501	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_43074674_43075473_43075591_43079901_43079987_43089276
transcript_96238.known	chr22	+	951	5	FSM	ENSG00000100290.3	ENST00000216115.3	951	5	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	8.0156097709407	80	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTCTCTGGTCCTCTCTGGGG	43110279	True	NA	20	True	AATAAA	-17	NA	43110749	43129712	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43110804_43124015_43124184_43127696_43127796_43128495_43128626_43129212
transcript_96239.known	chr22	-	2057	4	FSM	ENSG00000100294.13	ENST00000290429.11	2057	4	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_1	24.5130350811336	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTGCTTGGGTGGTTGTTCA	-43141046	True	NA	NA	False	NA	NA	NA	43143398	43132208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43133487_43137080_43137299_43141161_43141250_43142925
transcript_96242.known	chr22	+	1075	4	FSM	ENSG00000100300.18	ENST00000396265.4	1075	4	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	155.842513098605	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	43149449	False	NA	17	True	AATAAA	-17	NA	43151934	43163241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43152221_43159209_43159421_43161051_43161191_43162802
transcript_96243.known	chr22	+	636	3	FSM	ENSG00000100300.18	ENST00000583777.5	636	3	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	150.5	287	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCATGGCCTTTTTGCTTGG	43149061	True	NA	17	True	AATAAA	-17	NA	43151546	43163241	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43151605_43161051_43161191_43162802
transcript_96244.known	chr22	+	836	4	FSM	ENSG00000100300.18	ENST00000337554.8	836	4	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_1	47.9884245301811	1367	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCATGGCCTTTTTGCTTGGG	43149073	True	NA	18	True	AATAAA	-18	NA	43151558	43163242	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43151605_43159209_43159421_43161051_43161191_43162802
transcript_96246.known	chr22	-	1648	12	FSM	ENSG00000186976.15	ENST00000404038.5	1648	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	1.40247714732196	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATATTCGTTCATTTATCCAT	NA	False	NA	NA	False	NA	NA	NA	43812337	43683663	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43683856_43687470_43687582_43711474_43711624_43716847_43716973_43731698_43731812_43735856_43735994_43755765_43755833_43765304_43765394_43772891_43773104_43782179_43782326_43808994_43809132_43812167
transcript_96250.known	chr22	-	1129	8	FSM	ENSG00000186976.15	ENST00000356087.8	1129	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_5	1.24539969815448	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCGTGATGGTGATGTGAAAT	-43812149	True	NA	NA	False	AATACA	-15	NA	43812305	43716670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43716973_43731698_43731812_43735856_43735994_43755765_43755833_43765304_43765394_43782179_43782326_43808994_43809132_43812167
transcript_96252.nnic	chr22	+	648	2	NNC	ENSG00000261251.1	novel	859	2	NA	NA	-43	-1617	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_1	0	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTAATGGTTTTTGGTGTTTT	NA	False	NA	NA	False	AATAAA	-16	NA	43812412	43815777	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_43812834_43815550
transcript_96253.known	chr22	+	859	2	FSM	ENSG00000261251.1	ENST00000563715.1	859	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACTTATATGCAACAGATG	43812267	True	NA	NA	False	NA	NA	NA	43812455	43817394	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43812834_43816913
transcript_96254.known	chr22	-	2561	8	FSM	ENSG00000130540.14	ENST00000422525.1	2561	8	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_7	13.5194493306525	148	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CGTTGCGTCGAGCGTTTCTG	-43861796	True	NA	-9	True	AATAAA	-14	NA	43862470	43824509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43826114_43827513_43827641_43829059_43829199_43833639_43833735_43838866_43838994_43839944_43840026_43841801_43841933_43862213
transcript_96256.known	chr22	-	2197	7	FSM	ENSG00000100341.13	ENST00000381198.7	2000	7	0	-197	0	-1	multi-exon	FALSE	canonical	0	0	junction_5	11.8556128291858	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATTCATTCTTTCATTCATTT	-43891629	True	NA	NA	False	AATAAA	-22	NA	43892013	43879678	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_43880886_43881557_43881675_43884212_43884346_43886302_43886489_43887590_43887652_43889328_43889496_43891687
transcript_96259.nic	chr22	+	843	8	ISM	ENSG00000188677.15	ENST00000404989.1	1591	13	63813	261	-3590	0	3prime_fragment	FALSE	canonical	3	10	junction_1	7.14571371451417	33	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTTGCGTTTGAAGCCT	44132809	True	NA	10	True	NA	NA	NA	44132873	44168923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_44133010_44136459_44136519_44140123_44140144_44147860_44147923_44151482_44151552_44157981_44158084_44163857_44163931_44168601
transcript_96263.nnic	chr22	+	763	6	NNC	ENSG00000188677.15	novel	1569	14	NA	NA	10882	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	10.1862652625975	15	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CGTGCTTGCGTTTGAAGCCT	44147312	False	NA	10	True	NA	NA	NA	44147345	44168923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_44147481_44147860_44147923_44151482_44151552_44157981_44158084_44163857_44163931_44168601
transcript_96270.known	chr22	+	1692	15	FSM	ENSG00000100347.15	ENST00000350028.5	1692	15	0	0	0	0	multi-exon	TRUE	canonical	3	485	junction_8	397.76765472177	5509	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGAGGCAGCGTGGATGTGGT	43949491	True	NA	26	True	AATAAA	-17	NA	43955441	43996529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43955599_43963285_43963397_43964451_43964554_43968730_43968819_43972235_43972343_43972870_43973002_43973235_43973324_43976054_43976184_43976749_43976822_43977871_43977959_43981390_43981462_43983932_43984001_43989110_43989258_43990264_43990407_43996337
transcript_96282.known	chr22	+	2753	9	FSM	ENSG00000100344.11	ENST00000216180.8	2753	9	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	9.78519289539046	46	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TAAAAGAAAAGACAGCTGGG	43922130	True	NA	NA	False	AATAAA	-18	NA	43923804	43947582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43924099_43926934_43927168_43928823_43928890_43932877_43933088_43934605_43934667_43937050_43937273_43939992_43940126_43944690_43944796_43946153
transcript_96289.known	chr22	+	322	1	FSM	ENSG00000224856.2	ENST00000430869.2	322	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACTAATGAAAAGTCAATAAA	43951076	False	NA	NA	False	NA	NA	NA	43957026	43957348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_43957000_43957300
transcript_96291.known	chr22	-	5419	2	FSM	ENSG00000188636.4	ENST00000341255.4	5419	2	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_1	0	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATTTGCTACAGCTGTTTCT	-44495896	True	NA	-17	True	ATTAAA	-23	NA	44498233	44492582	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_44497812_44498043
transcript_96292.nnic	chr22	+	1581	12	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-11	-113	combination_of_known_splicesites	FALSE	canonical	3	13	junction_10	131.512498227669	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744894	True	NA	-5	True	NA	NA	NA	44752546	44862671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859679_44859835_44862274
transcript_96294.nnic	chr22	+	1398	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-11	-113	combination_of_known_splicesites	FALSE	canonical	3	21	junction_3	135.240119786992	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744894	True	NA	-5	True	NA	NA	NA	44752546	44862671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44802076_44802165_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_96296.nnic	chr22	+	1310	10	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-11	-113	combination_of_known_splicesites	FALSE	canonical	3	18	junction_2	142.167697881719	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTGTAAAAATAACCAGCCAT	44744894	True	NA	-5	True	NA	NA	NA	44752546	44862671	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_96298.known	chr22	+	905	9	FSM	ENSG00000186654.21	ENST00000432186.5	905	9	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	36.8474473335671	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATCCGCAGGCACTCTGTG	NA	False	NA	NA	False	NA	NA	NA	44668712	44736909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44668806_44702491_44702609_44714590_44714672_44725243_44725293_44726576_44726635_44731729_44731822_44732250_44732392_44735026_44735163_44736771
transcript_96300.known	chr22	+	1725	13	FSM	ENSG00000241484.10	ENST00000389774.6	1725	13	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	162.131291105559	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744905	True	NA	108	True	NA	NA	NA	44752557	44862784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44809005_44809099_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_96309.known	chr22	+	1615	12	FSM	ENSG00000241484.10	ENST00000356099.11	1615	12	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	61.6253677507341	681	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCATTTGTTAGGATGGATG	44744922	True	NA	108	True	NA	NA	NA	44752574	44862784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_96312.known	chr22	+	1487	11	FSM	ENSG00000241484.10	ENST00000336963.8	1487	11	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_10	117.379725676967	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTAGGATGGATGTTTT	44744950	True	NA	112	True	NA	NA	NA	44752602	44862788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44862274
transcript_96315.nic	chr22	+	1454	11	NIC	ENSG00000241484.10	novel	1615	12	NA	NA	-11	-101	combination_of_known_junctions	FALSE	canonical	3	29	junction_2	132.129822523153	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCAGCCATTAGATGAATTCA	44744894	True	NA	7	True	NA	NA	NA	44752546	44862683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_44752628_44786456_44786607_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931_44849061_44859730_44859835_44862274
transcript_96317.known	chr22	+	2905	10	FSM	ENSG00000241484.10	ENST00000460809.5	2905	10	0	0	0	0	multi-exon	FALSE	canonical	3	311	junction_1	38.1307043900837	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAAG	44744921	True	NA	NA	False	NA	NA	NA	44752573	44850963	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_44752628_44786456_44786607_44802076_44802165_44808306_44808439_44814671_44814759_44822370_44822470_44825482_44825594_44845268_44845343_44847972_44848051_44848931
transcript_9633.known	chr1	+	2967	23	FSM	ENSG00000131778.20	ENST00000369258.8	2967	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	150.414166512345	207	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232565	True	NA	13	True	AATAAA	-15	NA	147242683	147295762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96338.nnic	chr22	-	937	4	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-95	0	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_3	8.25967446224258	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	NA	False	NA	-3	True	ACTAAA	-17	NA	45163876	45134289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45158059_45158186_45163666
transcript_96341.nnic	chr22	-	887	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-22	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_2	10	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-45162652	True	NA	-3	True	ACTAAA	-17	NA	45163803	45134289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45163517
transcript_96342.known	chr22	-	2076	3	FSM	ENSG00000226328.7	ENST00000426282.6	2076	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	10.5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCCTTGTAGGCCACATTA	-45162630	True	NA	NA	False	AATAAA	-19	NA	45163781	45133019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_45134798_45138823_45138917_45163576
transcript_96343.nnic	chr22	-	785	3	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	3	8	junction_2	6.5	48	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-45162699	True	NA	-3	True	ACTAAA	-17	NA	45163850	45134289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45134798_45138823_45138917_45163666
transcript_96348.known	chr22	-	596	2	FSM	ENSG00000226328.7	ENST00000432502.1	596	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCACTTAGCATTATTTTTT	-45162508	False	NA	-3	True	ACTAAA	-17	NA	45163659	45134289	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_45134798_45163571
transcript_96349.nnic	chr22	-	442	2	NNC	ENSG00000226328.7	novel	2076	3	NA	NA	-31	-23690	at_least_one_novel_splicesite	FALSE	canonical	2	2	junction_1	0	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGATGTATGAAGACGTAT	-45162661	True	NA	NA	False	AAGAAA	-22	NA	45163812	45157979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_45158186_45163576
transcript_96350.nnic	chr22	-	331	2	Genic_Genomic	ENSG00000226328.7	novel	2076	3	NA	NA	-32	-23701	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTACATGTGATGTA	-45162662	True	NA	NA	False	AAGAAA	-11	NA	45163813	45157990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr22_-_45158175_45163666
transcript_96351.nnic	chr22	-	481	2	Genic_Genomic	ENSG00000226328.7	novel	2076	3	NA	NA	-32	-23711	multi-exon	FALSE	canonical	3	4	junction_1	0	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTCCACCATTTTGTGTAC	-45162662	True	NA	NA	False	AAGAAA	-1	NA	45163813	45158000	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Genic_Genomic_chr22_-_45158186_45163517
transcript_96354.known	chr22	+	5151	8	FSM	ENSG00000093000.19	ENST00000347635.9	5151	8	0	0	0	0	multi-exon	FALSE	canonical	3	614	junction_2	78.4724051329315	101	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTGAGTCTTATGTTCCT	45149723	True	NA	NA	False	AATAAA	-23	NA	45163924	45188017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45164297_45168167_45168247_45171599_45171684_45175893_45176081_45178237_45178901_45181285_45181368_45183401_45183521_45184452
transcript_96355.known	chr22	+	1084	6	FSM	ENSG00000100373.10	ENST00000216211.9	1084	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTCAGTAACTACTTACAGA	45284922	True	NA	NA	False	AATAAA	-19	NA	45284948	45295874	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45285066_45285940_45286097_45287171_45287452_45289060_45289144_45293180_45293314_45295559
transcript_96356.known	chr22	+	627	4	FSM	ENSG00000100373.10	ENST00000396082.2	627	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGTCCCTCCAACTGCAGGA	45284964	True	NA	NA	False	NA	NA	NA	45284990	45295822	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45285066_45285940_45286097_45293180_45293314_45295559
transcript_96357.known	chr22	+	2883	9	FSM	ENSG00000100376.12	ENST00000441876.7	2883	9	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_4	6.5	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTGTGCTCAGTGTTTC	45308117	True	NA	3	True	AATAAA	-14	NA	45309933	45341955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45330602_45330732_45332424_45332711_45335349_45335383_45336327_45336412_45340385
transcript_96362.known	chr22	+	1612	5	FSM	ENSG00000100376.12	ENST00000405673.5	1612	5	0	0	0	0	multi-exon	TRUE	canonical	2	15	junction_4	38.8522843601248	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTTGTCCATTTGATAGCTG	45309914	False	NA	8	True	AATACA	-1	NA	45310123	45329412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45310184_45322370_45322427_45323174_45323428_45327841_45328064_45328391
transcript_96363.known	chr22	+	1490	7	FSM	ENSG00000128408.9	ENST00000614167.2	1490	7	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_2	1.46249406456535	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCCGTGTATTTCTGTGAGG	45413440	True	NA	104	True	AAAACA	-14	NA	45413692	45432509	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289_45422409_45425947_45426176_45430899_45431067_45432283
transcript_96366.nic	chr22	+	1442	4	ISM	ENSG00000128408.9	ENST00000614167.2	1490	7	-8	9536	-8	467	5prime_fragment	FALSE	canonical	1	4	junction_2	1.88561808316413	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTGGTTTTTTTGTTTGTTT	45413432	True	NA	NA	False	NA	NA	NA	45413684	45422973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_45414016_45414321_45414404_45417601_45417947_45422289
transcript_9637.known	chr1	+	2937	23	FSM	ENSG00000131778.20	ENST00000622533.4	2937	23	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	156.40440800366	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232565	True	NA	11	True	AATAAA	-13	NA	147242683	147295760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254897_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264589_147265935_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96374.known	chr22	+	3294	12	FSM	ENSG00000130638.17	ENST00000252934.10	3294	12	0	0	0	0	multi-exon	FALSE	canonical	3	795	junction_4	72.335535887046	1512	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAATGGGGTAATGGTTATGT	45658551	True	NA	NA	False	AATAAA	-26	NA	45671833	45845307	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_45672180_45689711_45689904_45692995_45693079_45700281_45700379_45702688_45702848_45718412_45718494_45729424_45729591_45738730_45738840_45740368_45740539_45806958_45807023_45842990_45843179_45843668
transcript_96394.nnic	chr22	+	717	4	NNC	ENSG00000130638.17	novel	3135	11	NA	NA	-24870	193	at_least_one_novel_splicesite	FALSE	canonical	3	52	junction_1	437.163584942753	297	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGATGTTGGCTTGACTG	45768671	True	NA	53	True	AATAAA	-38	NA	45768725	45843990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_45768869_45806958_45807023_45842990_45843179_45843668
transcript_96396.nnic	chr22	+	1059	2	NNC	ENSG00000273145.1	novel	1207	2	NA	NA	-46	-3	at_least_one_novel_splicesite	FALSE	canonical	2	9	junction_1	0	13	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATTGGATTTTTGTCTTTT	46013354	True	NA	22	True	CATAAA	-16	NA	46013559	46015495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_46013620_46014496
transcript_96397.known	chr22	+	1207	2	FSM	ENSG00000273145.1	ENST00000608290.1	1207	2	0	0	0	0	multi-exon	TRUE	canonical	2	5	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGGATTTTTGTCTTTTTGT	46013400	True	NA	25	True	CATAAA	-19	NA	46013605	46015498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46013811_46014496
transcript_96404.known	chr22	-	1600	5	FSM	ENSG00000205643.11	ENST00000381037.4	1600	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	51.5388203202208	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	-46248790	True	NA	-20	True	AATAAA	-14	NA	46250289	46244020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46246672_46246796_46247109_46247222_46248171_46248285_46250255
transcript_96411.known	chr22	-	1489	4	FSM	ENSG00000205643.11	ENST00000314567.8	1489	4	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_3	23.8932812499432	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGATGGACTTTAAGATGCT	-46248794	True	NA	-12	True	AATAAA	-22	NA	46250293	46244012	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46247109_46247222_46248171_46248285_46250255
transcript_96415.nnic	chr22	-	729	3	NNC	ENSG00000205643.11	novel	1600	5	NA	NA	-25	0	at_least_one_novel_splicesite	FALSE	canonical	1	4	junction_1	15.5	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTGCACTGATGGACTTT	NA	False	NA	-20	True	AATAAA	-14	NA	46250336	46244020	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_46244526_46245095_46245239_46250255
transcript_96417.known	chr22	-	655	2	FSM	ENSG00000205643.11	ENST00000475605.1	655	2	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_1	0	67	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAGGGGGATAGAATTTTTA	-46248795	True	NA	-106	True	NA	NA	NA	46250294	46244622	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46250255
transcript_96419.known	chr22	-	1439	3	FSM	ENSG00000205643.11	ENST00000404583.5	1439	3	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	58	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATGGACTTTAAGATGCTCA	-46246786	False	NA	-10	True	AATAAA	-24	NA	46248285	46244010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46245239_46247124_46247222_46248171
transcript_9642.known	chr1	+	2862	22	FSM	ENSG00000131778.20	ENST00000650721.1	2862	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	182.968678781277	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232558	True	NA	-25	True	AATATA	-40	NA	147242676	147295724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96421.known	chr22	+	2566	14	FSM	ENSG00000075234.17	ENST00000381031.8	2566	14	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_13	15.9351496410558	54	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTTGAGCATCTGTGGTG	46265302	True	NA	10	True	ATTAAA	-23	NA	46268007	46294008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46268073_46268513_46268592_46272334_46272417_46273897_46274070_46275247_46275422_46278585_46278662_46281598_46281719_46283972_46284033_46285240_46285280_46287072_46287155_46288422_46288589_46289401_46289562_46289825_46289900_46292790
transcript_96426.known	chr22	-	1518	1	FSM	ENSG00000277232.2	ENST00000623117.1	1518	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	22	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCTAGCGTCAGGTATTTCTT	-46296606	True	NA	NA	False	ATTAAA	-16	NA	46296660	46295142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46295100_46296700
transcript_96428.known	chr22	+	2983	12	FSM	ENSG00000075218.19	ENST00000454366.2	2983	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	64.9816248661722	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTGATTTTTAAGCTTATC	46294193	True	NA	22	True	AATAAA	-19	NA	46296869	46330810	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318_46308944_46312140_46312306_46313889_46314014_46316031_46316413_46323189_46323263_46326435_46326655_46328687_46328890_46329357_46329568_46330046
transcript_96432.nic	chr22	+	1147	4	ISM	ENSG00000075218.19	ENST00000454366.2	2983	12	-85	21650	-85	-18156	5prime_fragment	FALSE	canonical	0	0	junction_2	85.0215658916411	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGAAGTTGTTCCTTTTGT	NA	False	NA	13	True	NA	NA	NA	46296784	46309160	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_46296932_46297379_46297480_46308149_46308208_46308318
transcript_9644.known	chr1	+	2890	22	FSM	ENSG00000131778.20	ENST00000652188.1	2890	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	198.071049347372	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AATAATAAATTTTCTGTTCC	147232587	True	NA	-10	True	NA	NA	NA	147242705	147295739	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96440.known	chr22	+	1651	11	FSM	ENSG00000100416.15	ENST00000645190.1	1651	11	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_4	89.1383194815787	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATAGTCTGATCGCTGCTTC	46329596	True	NA	14	True	AATAAA	-17	NA	46335713	46357340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_96443.known	chr22	+	1882	11	FSM	ENSG00000100416.15	ENST00000457572.5	1882	11	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_4	99.991249617154	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_96449.known	chr22	+	1258	11	FSM	ENSG00000100416.15	ENST00000644006.1	1258	11	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	135.969261232089	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCCAGGCCTGAGTCCCTT	46335823	False	NA	NA	False	NA	NA	NA	46335950	46356979	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46336107_46337778_46337945_46343261_46343369_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_9645.known	chr1	+	2841	22	FSM	ENSG00000131778.20	ENST00000651420.1	2841	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	196.443999394125	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATGGTTTTATTGCTTTCTT	147232582	True	NA	11	True	AATAAA	-13	NA	147242700	147295760	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96452.known	chr22	+	1381	10	FSM	ENSG00000100416.15	ENST00000381019.3	1381	10	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_9	137.386721014482	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGGGGCTCTGGCTGCTGG	46329627	True	NA	NA	False	NA	NA	NA	46335744	46357184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46343261_46343369_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_9646.known	chr1	+	2827	22	FSM	ENSG00000131778.20	ENST00000652616.1	2827	22	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	191.543249232466	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTTGCTAGTTGCATAATAA	147232554	True	NA	-25	True	AATATA	-40	NA	147242672	147295724	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96460.known	chr22	+	1830	10	FSM	ENSG00000100416.15	ENST00000381021.7	1830	10	0	0	0	0	multi-exon	FALSE	canonical	3	185	junction_3	101.647660639979	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350290_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_96463.known	chr22	+	1775	10	FSM	ENSG00000100416.15	ENST00000453630.5	1775	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	112.296235219372	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350345_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_96465.known	chr22	+	1793	10	FSM	ENSG00000100416.15	ENST00000441818.5	1793	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_3	117.65780052632	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACACATAGTCTGATCGCT	46335357	False	NA	9	True	AATAAA	-12	NA	46335400	46357335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46355989_46356073_46356841
transcript_9648.known	chr1	+	2461	21	FSM	ENSG00000131778.20	ENST00000650714.1	2461	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	201.593179448115	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATGGAATCAGGATCTGGT	147232579	True	NA	NA	False	AATAGA	-9	NA	147242697	147295585	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96480.known	chr22	+	1688	9	FSM	ENSG00000100416.15	ENST00000456595.5	1688	9	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_8	159.849880747531	113	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACACATAGTCTGATCGCTGC	46335381	False	NA	11	True	AATAAA	-14	NA	46335424	46357337	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46335847_46337778_46337945_46346421_46346545_46350349_46350464_46352120_46352175_46352263_46352331_46353766_46353868_46355443_46355589_46356841
transcript_9649.known	chr1	+	2782	21	FSM	ENSG00000131778.20	ENST00000467213.5	2782	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	199.758422851203	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232565	True	NA	13	True	AATAAA	-15	NA	147242683	147295762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96494.known	chr22	+	1476	2	FSM	ENSG00000100416.15	ENST00000476901.1	1476	2	0	0	0	0	multi-exon	FALSE	canonical	3	77	junction_1	0	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTCTCAGGTACTTTGGG	46330863	False	NA	15	True	AATAAA	-16	NA	46330874	46333699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46331733_46333081
transcript_96495.nic	chr22	-	1197	8	ISM	ENSG00000100422.14	ENST00000443629.5	1760	12	30218	0	-14177	0	3prime_fragment	FALSE	canonical	3	197	junction_6	18.6656948240698	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGTGTACATATTTGGCA	NA	False	NA	2	True	AAGAAA	-17	NA	46707989	46686982	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_46687207_46689991_46690201_46691571_46691778_46693426_46693504_46695209_46695316_46699312_46699466_46701635_46701711_46707842
transcript_96496.known	chr22	-	670	1	FSM	ENSG00000260708.1	ENST00000564152.1	670	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	452	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCTTTTTAAAATTATTTTT	-46760954	True	NA	-8	True	AATAAA	-32	NA	46762563	46761893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_46761900_46762600
transcript_96497.known	chr22	+	3758	13	FSM	ENSG00000054611.14	ENST00000337137.9	3758	13	0	0	0	0	multi-exon	FALSE	canonical	3	103	junction_1	14.7843291660085	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCGCGGCCTTGGCCTGTGA	46759937	True	NA	6	True	AATAAA	-14	NA	46762649	47175693	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_965.known	chr1	-	1589	3	FSM	ENSG00000127054.22	ENST00000498173.2	1589	3	0	0	0	0	multi-exon	FALSE	canonical	3	490	junction_1	6	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTTGTGAAACTTTAATT	-1318764	True	NA	-18	True	AATGAA	-15	NA	1324687	1318680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1319525_1320455_1321094_1324580
transcript_96500.known	chr22	+	1949	12	FSM	ENSG00000054611.14	ENST00000407381.7	1949	12	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	39.3402197828378	119	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTAGACCGAGACGTTGCGC	46759959	True	NA	19	True	AATAAA	-13	NA	46762671	47174083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_46762849_46792519_46792577_46793500_46793842_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_96502.nnic	chr22	+	1650	10	NNC	ENSG00000054611.14	novel	3758	13	NA	NA	10	182425	at_least_one_novel_splicesite	TRUE	canonical	2	5	junction_9	42.6770820620779	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGATGCTGGCTTTTTCATT	46759914	True	NA	NA	False	AATAAA	-19	NA	46762626	46976200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_46762849_46792519_46792577_46793500_46793842_46797443_46797621_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46975835
transcript_96503.nnic	chr22	+	1587	10	NIC	ENSG00000054611.14	novel	1886	11	NA	NA	-10	0	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	42.1675084091069	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACCGAGACGTTGCGCTGAC	46759927	True	NA	23	True	AATAAA	-17	NA	46762639	47174087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr22_+_46762849_46878652_46878724_46891265_46891395_46894783_46894847_46912073_46912189_46974289_46974400_46997633_46997710_47037070_47037199_47111507_47111604_47173497
transcript_96508.nnic	chr22	+	578	3	NNC	ENSG00000285722.1	novel	2340	2	NA	NA	-3	-527	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTATGTGTTAATTGAGTTTT	49372852	True	NA	NA	False	TATAAA	-27	NA	49372920	49376592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_+_49373180_49374417_49374464_49376319
transcript_96509.known	chr22	-	918	4	FSM	ENSG00000260613.2	ENST00000661712.1	918	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGGTTTTGTCTTATTCCTGC	NA	False	NA	NA	False	AATAAA	-39	NA	49838901	49833127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_49833688_49837291_49837395_49837507_49837553_49838691
transcript_96510.known	chr22	+	1428	10	FSM	ENSG00000184164.15	ENST00000328268.9	1428	10	0	0	0	0	multi-exon	FALSE	canonical	3	470	junction_5	82.4802258382031	415	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GAACGGGCGTGGGTTTGTCT	49913854	True	NA	38	True	AATAAA	-28	NA	49918633	49927537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_49918899_49919229_49919313_49919729_49919841_49920155_49920248_49921584_49921762_49922611_49922708_49923233_49923318_49924359_49924456_49925416_49925558_49927254
transcript_96514.known	chr22	-	5330	10	FSM	ENSG00000182858.14	ENST00000330817.11	5330	10	0	0	0	0	multi-exon	FALSE	canonical	3	136	junction_3	24.6671671620896	103	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCCCCTCTTTCCTAGACGG	-49915651	True	NA	-16	True	GATAAA	-14	NA	49918438	49900228	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_49904067_49904178_49904255_49904336_49904507_49907720_49907945_49909243_49909348_49909893_49910089_49910433_49910608_49913384_49913518_49913603_49913844_49918262
transcript_9652.known	chr1	+	2717	21	FSM	ENSG00000131778.20	ENST00000650828.1	2717	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	231.746731368535	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232579	True	NA	4	True	AATAAA	-6	NA	147242697	147295753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147255812_147255928_147256530_147256563_147259836_147259919_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96523.known	chr22	+	2622	2	FSM	ENSG00000184164.15	ENST00000487969.1	2622	2	0	0	0	0	multi-exon	FALSE	canonical	3	581	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGAGGAGAACGGGCGTG	49923191	False	NA	29	True	AATAAA	-19	NA	49923209	49927528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_49925558_49927254
transcript_96524.known	chr22	+	2102	6	FSM	ENSG00000198355.5	ENST00000360612.5	2102	6	0	0	0	0	multi-exon	TRUE	canonical	3	352	junction_1	22.4908870434227	149	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	49958718	True	NA	19	True	ATTAAA	-16	NA	49960771	49964072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_49961033_49961124_49961235_49961317_49961369_49961441_49961812_49962688_49962866_49962939
transcript_96525.nic	chr22	+	1460	2	ISM	ENSG00000198355.5	ENST00000360612.5	2102	6	1767	0	1767	0	3prime_fragment	FALSE	canonical	3	410	junction_1	0	153	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGGATAATCCTGTATTTAT	49962517	False	NA	19	True	ATTAAA	-16	NA	49962538	49964072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_49962866_49962939
transcript_96526.nic	chr22	+	303	2	ISM	ENSG00000073150.14	ENST00000402472.2	2291	5	-30	4090	0	-4090	5prime_fragment	FALSE	canonical	2	6	junction_1	0	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CCAAGAGAGTGGATTCCTTT	50170573	True	NA	6	True	AATAAA	-18	NA	50170730	50175508	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_+_50170957_50175431
transcript_96527.known	chr22	+	3052	3	FSM	ENSG00000073150.14	ENST00000395842.3	3052	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTGCTCCGCCGGGGACT	50170573	True	NA	11	True	AATAAA	-18	NA	50170730	50180295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50170957_50176938_50178403_50178933
transcript_96530.known	chr22	+	2305	10	FSM	ENSG00000170638.10	ENST00000380909.9	2305	10	0	0	0	0	multi-exon	TRUE	canonical	3	279	junction_1	72.8755069016528	359	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179478	True	NA	16	True	AATAAA	-16	NA	50185912	50199595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50185977_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_96536.known	chr22	+	2329	10	FSM	ENSG00000170638.10	ENST00000303434.8	2329	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	124.403862430611	121	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTTGTGACGTGTGAAC	50179482	True	NA	19	True	AATAAA	-19	NA	50185916	50199598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_96538.known	chr22	+	2172	10	FSM	ENSG00000170638.10	ENST00000395827.5	2172	10	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	154.163533501696	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGTCTGTGCCGACTCGGT	50190456	False	NA	NA	False	NA	NA	NA	50190597	50199475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50190649_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344
transcript_96554.known	chr22	+	2404	9	FSM	ENSG00000170638.10	ENST00000463233.1	2404	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	131.291660055009	106	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGTTTTGTGACGTGTG	50179483	True	NA	16	True	AATAAA	-16	NA	50185917	50199595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50186002_50193026_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50198187_50198344
transcript_96555.known	chr22	+	1628	10	FSM	ENSG00000170638.10	ENST00000395829.1	1628	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	155.386813238431	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACTGAAATAAATTCTAATTT	50192872	False	NA	-10	True	NA	NA	NA	50193013	50199569	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50193094_50193575_50193655_50194339_50194507_50194899_50195041_50197240_50197352_50197448_50197589_50197822_50197996_50198074_50198187_50198344_50198516_50199115
transcript_96556.known	chr22	+	2283	9	FSM	ENSG00000073169.15	ENST00000380903.7	2283	9	0	0	0	0	multi-exon	FALSE	canonical	3	206	junction_2	30.2528407757024	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGTCTCTGTGGTCATTG	50198838	True	NA	9	True	AATAAA	-17	NA	50201010	50217616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50201591_50206316_50206521_50208535_50208717_50210180_50210312_50210630_50210912_50215716_50215868_50216690_50216877_50216971_50217129_50217204
transcript_96560.nnic	chr22	-	1672	13	NNC	ENSG00000188130.14	novel	1778	12	NA	NA	-12	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_12	69.7285908999235	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTTCTGGCTGTGCGTCCTC	-50260696	True	NA	-4	True	AATAGA	-17	NA	50261728	50252902	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr22_-_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50261166_50261297_50261384_50261484_50261632
transcript_96562.known	chr22	-	6248	26	FSM	ENSG00000188130.14	ENST00000497036.5	6248	26	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	85.4277144725294	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCGGCCGCGATCCGGACCCC	-50261095	False	NA	NA	False	NA	NA	NA	50261143	50245449	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50245531_50245674_50245737_50245909_50246093_50246297_50246377_50246678_50246736_50246874_50246967_50247691_50247777_50247889_50248146_50248224_50248293_50248365_50248473_50248661_50248752_50248830_50248891_50249102_50249455_50249634_50249704_50249859_50249965_50250062_50253481_50255196_50255371_50255452_50255532_50255614_50255695_50255809_50255882_50256084_50256200_50256598_50256647_50256934_50256965_50257081_50257194_50258242_50258302_50260828
transcript_96565.nic	chr22	-	1027	9	ISM	ENSG00000205593.12	ENST00000413817.8	4891	20	12445	2936	4400	0	3prime_fragment	FALSE	canonical	1	4	junction_1	2.80345768650073	19	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACAGCATGGCCTTGACCATA	-50314533	True	NA	-35	True	AGTAAA	-17	NA	50314567	50311965	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr22_-_50312262_50312342_50312418_50312522_50312626_50312998_50313109_50313445_50313500_50313634_50313725_50313813_50313879_50314206_50314273_50314399
transcript_96567.known	chr22	-	2593	14	FSM	ENSG00000100258.18	ENST00000474879.7	2593	14	0	0	0	0	multi-exon	FALSE	canonical	2	129	junction_12	33.1885415458533	36	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGTGTGCCTGGTGCTGCTTT	-50505023	True	NA	-4	True	AATAAA	-20	NA	50507702	50502948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50503700_50503807_50503905_50504339_50504452_50504558_50504728_50504801_50504985_50505056_50505154_50505228_50505335_50505402_50505538_50505673_50505816_50506034_50506214_50506284_50506503_50506637_50506667_50506781_50507036_50507581
transcript_96571.known	chr22	+	1996	20	FSM	ENSG00000025770.19	ENST00000299821.15	1996	20	0	0	0	0	multi-exon	TRUE	canonical	2	31	junction_15	58.3235791871236	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTTCCCCCTAAAAACCCTT	50507492	True	NA	18	True	AATAAA	-18	NA	50508259	50523472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189_50519321_50520964_50521037_50521542_50521610_50521740_50521849_50521985_50522040_50522180_50522252_50522342_50522416_50522497_50522570_50522670_50522721_50522820_50522923_50523016_50523167_50523234
transcript_96583.known	chr22	+	1388	9	FSM	ENSG00000025770.19	ENST00000395698.7	1388	9	0	0	0	0	multi-exon	FALSE	canonical	3	242	junction_1	11.9419167222017	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGCATACAGAGGAAATGTTA	50507475	True	NA	4	True	ATTAAA	-16	NA	50508242	50519752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50508446_50516446_50516549_50517426_50517483_50517576_50517662_50517740_50517810_50517972_50518053_50518132_50518279_50518648_50518733_50519189
transcript_96587.known	chr22	-	992	2	FSM	ENSG00000284194.3	ENST00000252785.3	992	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCCCATCATTAAACGGGCT	-50524288	True	NA	-32	True	NA	NA	NA	50525604	50523595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50524425_50525441
transcript_96588.known	chr22	-	984	2	FSM	ENSG00000284194.3	ENST00000395693.8	984	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	687	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGTGTGTGTGTGTGATCT	-50524282	True	NA	-4	True	ATTAAA	-15	NA	50525598	50523567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50524425_50525471
transcript_96590.known	chr22	-	643	5	FSM	ENSG00000177989.14	ENST00000403326.5	643	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0.82915619758885	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCGTGTCCGCCTCTCTCTCT	NA	False	NA	-1	True	NA	NA	NA	50532108	50530425	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50530561_50530711_50530853_50530936_50531059_50531190_50531296_50531968
transcript_96591.known	chr22	-	462	3	FSM	ENSG00000217442.4	ENST00000406915.4	462	3	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	0.5	129	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCGAGGACCTCTTCTCTC	-50562805	True	NA	-2	True	AATAAA	-17	NA	50562919	50551111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50551403_50556296_50556406_50562857
transcript_96595.known	chr22	-	1474	11	FSM	ENSG00000100288.20	ENST00000406938.3	1474	11	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_10	105.324071322751	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580442	True	NA	29	True	AATAAA	-18	NA	50582849	50578962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50581863_50582248_50582358_50582557
transcript_96599.known	chr22	-	1856	10	FSM	ENSG00000100288.20	ENST00000481673.5	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_9	97.0987787745354	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580438	True	NA	29	True	AATAAA	-18	NA	50582845	50578962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50581419_50581554_50581748_50582358_50582557
transcript_96610.known	chr22	-	1401	8	FSM	ENSG00000100288.20	ENST00000484266.5	1401	8	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	149.368603099302	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580417	True	NA	29	True	AATAAA	-18	NA	50582824	50578962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579831_50579973_50580083_50580189_50580272_50580357_50580417_50580564_50580661_50582248
transcript_96617.known	chr22	+	940	2	FSM	ENSG00000205559.5	ENST00000656328.1	940	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGTCAGACTCAGTCTCAAAA	50582516	True	NA	NA	False	NA	NA	NA	50583119	50584333	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50583324_50583597
transcript_9662.known	chr1	+	2578	19	FSM	ENSG00000131778.20	ENST00000652346.1	2578	19	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	212.813167930099	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232578	True	NA	4	True	AATAAA	-6	NA	147242696	147295753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96620.known	chr22	-	624	5	FSM	ENSG00000100288.20	ENST00000464225.5	624	5	0	0	0	0	multi-exon	FALSE	canonical	3	64	junction_3	179.58284996068	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCTGTCCTGGCCCTGCTGA	-50580136	False	NA	29	True	AATAAA	-18	NA	50580253	50578962	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50579256_50579425_50579508_50579726_50579803_50579973_50580083_50580189
transcript_96621.known	chr22	-	1895	9	FSM	ENSG00000100299.18	ENST00000356098.9	1895	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_8	16.9036793332103	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCGTCCAATCCTGGGGTAA	-50627541	True	NA	-7	True	NA	NA	NA	50628170	50625017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555_50627793_50627945
transcript_96623.known	chr22	-	4294	8	FSM	ENSG00000100299.18	ENST00000216124.10	4294	8	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_6	17.0772554311641	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTAGTGAGGGTTCTGTT	-50627523	True	NA	-1	True	AATAAA	-19	NA	50628152	50622753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627555
transcript_96624.known	chr22	-	1650	8	FSM	ENSG00000100299.18	ENST00000453344.6	1650	8	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_7	8.08374534331149	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGATGTGACAATTCGTCCAA	-50627544	True	NA	-18	True	NA	NA	NA	50628173	50625028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50625465_50625578_50625682_50625935_50626064_50626153_50626279_50626590_50626761_50626833_50627053_50627165_50627407_50627945
transcript_96630.known	chr22	-	2341	10	FSM	ENSG00000079974.19	ENST00000395593.7	2341	10	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_8	84.0052908386662	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780299	True	NA	-30	True	AGTAAA	-17	NA	50783642	50767505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50782890_50783046_50783500
transcript_96634.known	chr22	-	2401	10	FSM	ENSG00000079974.19	ENST00000395595.8	2401	10	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_9	58.0880557621119	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780293	True	NA	-30	True	AGTAAA	-17	NA	50783636	50767505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783038_50783287_50783500
transcript_9664.known	chr1	+	2505	18	FSM	ENSG00000131778.20	ENST00000361293.10	2505	18	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	218.278971370493	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTCCTAATGGTTTTATTG	147232562	True	NA	4	True	AATAAA	-6	NA	147242680	147295753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147264428_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96640.known	chr22	-	2169	9	FSM	ENSG00000079974.19	ENST00000395598.7	2169	9	0	0	0	0	multi-exon	FALSE	canonical	3	45	junction_3	55.9540827375447	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTGAGTAAATGTATGTGC	-50780316	True	NA	-30	True	AGTAAA	-17	NA	50783659	50767505	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769550_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782348_50783500
transcript_96643.known	chr22	-	2140	9	FSM	ENSG00000079974.19	ENST00000354869.8	2153	9	15	-2	9	2	multi-exon	FALSE	canonical	3	41	junction_8	49.9324543758866	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGAGTAAATGTATGTGCTT	-50780278	True	NA	-28	True	AGTAAA	-19	NA	50783621	50767503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769454_50769553_50769904_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_96652.known	chr22	-	831	6	FSM	ENSG00000079974.19	ENST00000464678.5	831	6	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_5	65.7559122817105	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCCTTGGTTGGTTGCTTGC	-50779943	False	NA	NA	False	NA	NA	NA	50783286	50769781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50770017_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783044
transcript_9666.known	chr1	+	2358	17	FSM	ENSG00000131778.20	ENST00000369259.4	2358	17	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_1	157.418977175562	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTATTGCTTTCTTTCCCT	147232565	True	NA	16	True	AATAAA	-18	NA	147242683	147295765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96666.nic	chr22	+	584	4	FSM	ENSG00000184319.17	ENST00000693416.1	731	4	-35	182	-11	-7	multi-exon	FALSE	canonical	2	4	junction_3	76.2860115326234	95	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	50780495	True	NA	NA	False	ATTAAA	-14	NA	50783728	50789172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50788749_50788799_50788894
transcript_96671.known	chr22	+	528	4	FSM	ENSG00000184319.17	ENST00000463325.5	528	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_3	11.8977121983832	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCATGTTTTCTTCTGCCGTA	50780541	True	NA	NA	False	NA	NA	NA	50783774	50788954	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784073_50785172_50785294_50788749_50788799_50788894
transcript_96691.known	chr22	+	813	3	FSM	ENSG00000184319.17	ENST00000467796.5	813	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	135	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTATATTCAATAATGATA	NA	False	NA	NA	False	NA	NA	NA	50783253	50799305	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783295_50785172_50785294_50798654
transcript_96692.nic	chr22	+	694	3	FSM	ENSG00000184319.17	ENST00000689105.1	836	3	-26	168	-11	0	multi-exon	FALSE	canonical	3	32	junction_2	73	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	50780495	True	NA	NA	False	ATTAAA	-28	NA	50783728	50789186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50788749
transcript_96693.nnic	chr22	+	552	3	FSM	ENSG00000184319.17	ENST00000686648.1	521	3	-35	4	-11	0	multi-exon	FALSE	canonical	1	6	junction_2	86	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCATGTATTTGTAATTTTA	50780495	True	NA	NA	False	ATTAAA	-28	NA	50783728	50789186	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50788891
transcript_96694.known	chr22	+	1009	3	FSM	ENSG00000184319.17	ENST00000462238.6	1131	3	17	105	2	0	multi-exon	FALSE	canonical	3	178	junction_1	46.5	930	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTCTAGGAGTTTGGTGAAT	50780523	True	NA	NA	False	AAGAAA	-20	NA	50783756	50799434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50783865_50785172_50785294_50798654
transcript_96700.known	chr22	+	2987	3	FSM	ENSG00000184319.17	ENST00000480246.2	3083	3	96	0	-13	0	multi-exon	FALSE	canonical	3	25	junction_1	123	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTGCTCAGACTCAGGTATTT	50780628	False	NA	NA	False	ATTAAA	-20	NA	50783861	50801309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784073_50785172_50785294_50798654
transcript_96708.known	chr22	+	469	1	FSM	ENSG00000184319.17	ENST00000427528.1	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTGAGTCCAGCTGGCTAAC	NA	False	NA	4	True	NA	NA	NA	50798654	50799123	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50798700_50799100
transcript_96709.known	chr22	+	658	4	FSM	ENSG00000184319.17	ENST00000423888.6	732	4	2	72	2	-7	multi-exon	FALSE	canonical	2	4	junction_3	44.3946943776944	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTTTATTTGGAATCCATG	50780578	True	NA	NA	False	ATTAAA	-14	NA	50783811	50789172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784022_50785172_50785294_50788749_50788799_50788894
transcript_96710.known	chr22	+	1080	3	FSM	ENSG00000184319.17	ENST00000651346.2	1284	3	105	99	-25	7	multi-exon	FALSE	canonical	3	109	junction_1	81	417	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGTTTGGTGAATATTTATT	50780616	True	NA	NA	False	AAGAAA	-27	NA	50783849	50799441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_+_50784022_50785172_50785294_50798654
transcript_96711.known	chr22	-	2049	8	FSM	ENSG00000079974.19	ENST00000436958.5	2049	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	86.3545137257823	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAGTAAAGGCTGAATTACA	-50780295	True	NA	-54	True	NA	NA	NA	50783638	50767529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr22_-_50768875_50769040_50769125_50769424_50769553_50775771_50775852_50776669_50776750_50777951_50777982_50782187_50782352_50783500
transcript_96714.known	chr3	+	2180	8	FSM	ENSG00000072756.17	ENST00000280591.10	2180	8	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_6	71.0487041918918	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123332	True	NA	68	True	AATAAA	-15	NA	3126951	3149023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146564_3147449_3147704_3147905
transcript_96716.known	chr3	+	2252	8	FSM	ENSG00000072756.17	ENST00000251607.11	2252	8	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_1	32.8757711168972	137	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGTTTATTTCAGCTGCTAT	3123320	True	NA	68	True	AATAAA	-15	NA	3126939	3149023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_96721.known	chr3	+	1113	7	FSM	ENSG00000072756.17	ENST00000651093.1	1113	7	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	71.6645348520142	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTGGTTACCAAATGGAAAAA	3123343	True	NA	NA	False	AAGAAA	-43	NA	3126962	3148101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3147449_3147704_3147905
transcript_96722.known	chr3	+	1934	7	FSM	ENSG00000072756.17	ENST00000650755.1	1934	7	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	75.8521954563977	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGTCTTTAAAGTGTTATTT	3123332	True	NA	-44	True	NA	NA	NA	3126951	3148911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3140509_3140649_3144583_3144711_3146429_3146624_3147449_3147704_3147905
transcript_96727.known	chr3	+	541	5	FSM	ENSG00000072756.17	ENST00000397779.3	541	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	102.041658159793	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACAACTGACTGGCAGAAAGA	3123350	True	NA	NA	False	NA	NA	NA	3126969	3140587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3127945_3128019_3129013_3129189_3137259_3137454_3140509
transcript_96729.nic	chr3	+	651	4	ISM	ENSG00000072756.17	ENST00000651093.1	1113	7	-35	7373	-5	0	5prime_fragment	FALSE	canonical	3	137	junction_1	41.2660743091573	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACTTGAGAAGTTGCA	3123308	True	NA	NA	False	AGTAAA	-21	NA	3126927	3140728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_3126991_3129013_3129189_3137259_3137454_3140509
transcript_9673.known	chr1	+	1822	12	FSM	ENSG00000131778.20	ENST00000652587.1	1822	12	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_1	201.568887799992	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TAGTTGCATAATAATAAATT	147232535	True	NA	-19	True	NA	NA	NA	147242653	147295730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96731.known	chr3	+	854	4	FSM	ENSG00000072756.17	ENST00000420393.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_1	9.80929264637478	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACCTGGGGAGCTTTTAAAG	3123360	True	NA	NA	False	NA	NA	NA	3126979	3130214	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3127290_3127945_3128019_3129013_3129189_3129918
transcript_96732.known	chr3	+	987	3	FSM	ENSG00000072756.17	ENST00000339437.11	987	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	52	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3123320	True	NA	2	True	AATAAA	-13	NA	3126939	3130679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3126991_3129013_3129189_3129918
transcript_96734.known	chr3	+	1935	3	FSM	ENSG00000072756.17	ENST00000402675.5	1935	3	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	5.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTGGTTCATCTAATTTA	3123400	True	NA	2	True	AATAAA	-13	NA	3127019	3130679	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3128019_3129013_3129189_3129918
transcript_96736.known	chr3	+	494	1	FSM	ENSG00000271870.1	ENST00000607052.1	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	7	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTTTGGTTGTTATTTCTGT	3152931	False	NA	15	True	AATAAA	-21	NA	3152941	3153435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3152900_3153400
transcript_96737.known	chr3	+	447	3	FSM	ENSG00000072756.17	ENST00000482311.1	447	3	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	23.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTCAACTTGAGAAGTTGCA	3129138	True	NA	NA	False	AGTAAA	-21	NA	3129154	3140728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3129189_3137259_3137454_3140509
transcript_96738.known	chr3	+	2147	7	FSM	ENSG00000072756.17	ENST00000650839.1	2147	7	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	80.342496019645	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATTATATATTCTCTAAAGA	3125394	False	NA	0	True	ATTAAA	-14	NA	3129013	3148955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3129189_3137259_3137454_3140509_3140649_3144583_3144711_3146415_3146624_3147449_3147704_3147905
transcript_96739.known	chr3	-	2223	12	FSM	ENSG00000113851.16	ENST00000639284.1	2223	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	92.4915899683643	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATCTTCATAACCATTAAAGT	NA	False	NA	NA	False	NA	NA	NA	3179727	3144627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3145500_3150882_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_96740.known	chr3	-	2203	11	FSM	ENSG00000113851.16	ENST00000432408.6	2203	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_10	89.8047326147125	100	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175671	True	NA	NA	False	AGTAAA	-20	NA	3179710	3150010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3151046_3152455_3152588_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175267_3179620
transcript_96741.known	chr3	-	2038	10	FSM	ENSG00000113851.16	ENST00000424814.5	2038	10	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	100.576118216779	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGTTCTTTGTTCAAATAA	-3175635	True	NA	NA	False	AGTAAA	-20	NA	3179674	3150010	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3151046_3153423_3153489_3153959_3154076_3154746_3154832_3156218_3156282_3167633_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_96742.known	chr3	-	878	5	FSM	ENSG00000113851.16	ENST00000450014.1	878	5	0	0	0	0	multi-exon	FALSE	canonical	3	265	junction_1	39.054449170357	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTAAGGTATCCTTGTTATT	-3175635	True	NA	NA	False	AATAAA	-13	NA	3179674	3167429	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3167794_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_96743.known	chr3	-	1012	5	FSM	ENSG00000113851.16	ENST00000498700.5	1012	5	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_1	131.763756397577	197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGCCTTGTGACATTTAGA	-3175662	True	NA	2	True	AATAAA	-25	NA	3179701	3172175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_3172647_3172775_3172926_3174058_3174262_3175162_3175270_3179620
transcript_96746.known	chr3	-	2147	9	FSM	ENSG00000144455.14	ENST00000272902.10	2147	9	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_4	12.8251461979971	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTCACCGTCATCAGCTTCT	-4464923	True	NA	-10	True	AATAAA	-19	NA	4467269	4361145	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4449265_4449341_4452875_4453050_4466975
transcript_96748.known	chr3	-	1447	8	FSM	ENSG00000144455.14	ENST00000383843.9	1447	8	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_6	41.7353175942615	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGGATGGACAGCATGACCTC	-4464918	True	NA	NA	False	AATGAA	-1	NA	4467264	4361765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4362255_4376329_4376390_4410864_4410979_4417127_4417243_4418009_4418133_4420063_4420147_4452875_4453050_4466975
transcript_96750.nnic	chr3	-	1025	2	NNC	ENSG00000144455.14	novel	504	2	NA	NA	618	-17	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTTTATGTAATCGGGTC	-3799216	True	NA	-18	True	AATAAA	-17	NA	3799278	3795255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_3795429_3798426
transcript_96751.known	chr3	+	5960	2	FSM	ENSG00000175928.6	ENST00000319331.4	5960	2	0	0	0	0	multi-exon	FALSE	canonical	3	698	junction_1	0	143	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTGGTTTCTATTTATTCAA	3788520	True	NA	14	True	NA	NA	NA	3799430	3849834	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_3799920_3844363
transcript_96753.known	chr3	+	1657	4	FSM	ENSG00000170364.13	ENST00000425863.5	1657	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.8738502225228	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302581	True	NA	8	True	AATAAA	-16	NA	4303370	4317265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897_4313230_4313646_4313762_4316211
transcript_96755.known	chr3	+	1676	4	FSM	ENSG00000170364.13	ENST00000413809.5	1676	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	18.8738502225228	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302542	True	NA	8	True	AATAAA	-16	NA	4303331	4317265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897_4313230_4313666_4313762_4316211
transcript_96758.known	chr3	+	2443	3	FSM	ENSG00000170364.13	ENST00000358065.5	2076	3	-65	-302	-28	302	multi-exon	FALSE	canonical	3	40	junction_1	1	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTGGCCCAAGAATAATAAC	NA	False	NA	NA	False	AATAAA	-45	NA	4303303	4317567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897_4313762_4316211
transcript_96760.known	chr3	+	1359	3	FSM	ENSG00000170364.13	ENST00000425046.1	1359	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302547	True	NA	8	True	AATAAA	-16	NA	4303336	4317265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4313646_4313762_4316211
transcript_96763.nnic	chr3	+	1344	3	NIC	ENSG00000170364.13	novel	1676	4	NA	NA	0	0	combination_of_known_splicesites	FALSE	canonical	2	3	junction_1	19.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	4302542	True	NA	8	True	AATAAA	-16	NA	4303331	4317265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303527_4313666_4313762_4316211
transcript_96766.nnic	chr3	+	1225	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-28	-52	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTGATTGTAATGGTTC	NA	False	NA	14	True	AATAAA	-26	NA	4303303	4317213	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303527_4316211
transcript_96767.nnic	chr3	+	1277	2	NIC	ENSG00000170364.13	novel	1359	3	NA	NA	-28	0	combination_of_known_splicesites	FALSE	canonical	3	25	junction_1	0	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GTTATAATGATTTAAAATTC	NA	False	NA	8	True	AATAAA	-16	NA	4303303	4317265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_4303527_4316211
transcript_96768.known	chr3	+	1671	2	FSM	ENSG00000170364.13	ENST00000430981.1	1671	2	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTCCTGCGTCCTACTTAATT	4302571	True	NA	13	True	AATAAA	-25	NA	4303360	4314402	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_4303527_4312897
transcript_96771.known	chr3	-	858	2	FSM	ENSG00000231249.2	ENST00000412804.2	1470	2	38	574	16	-574	multi-exon	FALSE	canonical	1	1	junction_1	0	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	75	GTGTTAAAAAAAAAAAAAAA	-4493046	True	NA	NA	False	NA	NA	NA	4493163	4490890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_4491369_4492783
transcript_96778.known	chr3	+	2933	7	FSM	ENSG00000134108.14	ENST00000256496.8	2933	7	0	0	0	0	multi-exon	FALSE	canonical	3	178	junction_1	17.6414914965323	262	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAATTGATATTGTGATTT	5117366	True	NA	11	True	AATAAA	-16	NA	5122291	5180911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_5122589_5170502_5170584_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_96782.known	chr3	-	672	4	FSM	ENSG00000233912.1	ENST00000439325.1	672	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1.88561808316413	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGCACAGTGACTGGCT	-5187270	True	NA	NA	False	NA	NA	NA	5187329	5156904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_5157024_5157761_5157852_5186423_5186512_5186954
transcript_96785.known	chr3	+	1641	7	FSM	ENSG00000134108.14	ENST00000455168.5	1641	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	79.4096271801404	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACTCCTGACTTTTTATATC	5117366	True	NA	12	True	ATTAAA	-25	NA	5122291	5179646	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_5122589_5170502_5170557_5172149_5172224_5172646_5172741_5174016_5174085_5174343_5174415_5178663
transcript_96786.known	chr3	+	1083	5	FSM	ENSG00000189229.12	ENST00000433639.1	1083	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.866025403784439	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTTGAGGATGTGTGCCTG	6490383	True	NA	NA	False	NA	NA	NA	6490478	6736129	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_6490673_6717568_6717668_6724449_6724547_6732270_6732496_6735661
transcript_96788.known	chr3	+	668	2	FSM	ENSG00000189229.12	ENST00000660158.1	668	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACTGGTTTATGTATTTAC	6490364	True	NA	NA	False	GATAAA	-14	NA	6490459	6558041	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_6490673_6557586
transcript_96789.known	chr3	+	1139	2	FSM	ENSG00000189229.12	ENST00000653839.1	1139	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGTCTGCCTGCCTTTTTTTG	6490629	False	NA	NA	False	AATAAA	-24	NA	6490724	6584548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_6490947_6583631
transcript_9679.nic	chr1	+	1533	10	NIC	ENSG00000131778.20	novel	2818	21	NA	NA	6	0	combination_of_known_junctions	TRUE	canonical	1	7	junction_1	291.171961409596	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGTTTTATTGCTTTCTTTC	147232541	True	NA	13	True	AATAAA	-15	NA	147242659	147295762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_147242831_147275353_147275469_147276103_147276258_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147294408_147294518_147295430
transcript_96793.nnic	chr3	-	1048	4	NIC	ENSG00000224884.1	novel	561	2	NA	NA	-18858	506	combination_of_known_splicesites	FALSE	canonical	1	3	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGTAATTCACCCAAGCTA	-8611915	True	NA	NA	False	AATAAA	-26	NA	8611982	8573219	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_8573875_8603243_8603380_8611227_8611360_8611857
transcript_96795.known	chr3	-	524	2	FSM	ENSG00000227110.7	ENST00000455811.2	524	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTGACAGAGCCCTAATCTT	-8501503	False	NA	NA	False	GGGGCT	-6	NA	8501629	8498484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8498850_8501470
transcript_96798.nic	chr3	+	1812	7	NIC	ENSG00000071282.12	novel	8284	6	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	24.2212028327799	111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACCCTTATCTAATTATTTAC	8500850	True	NA	8	True	AATAAA	-22	NA	8501822	8568125	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_8501981_8514924_8514996_8532736_8532826_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_96801.known	chr3	+	1113	5	FSM	ENSG00000071282.12	ENST00000454244.4	1113	5	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	22.2148598915231	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATCCACAGGATCCCACCGAG	8500885	True	NA	NA	False	NA	NA	NA	8501857	8567621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_8501981_8537184_8537441_8548567_8548904_8565431_8565648_8567439
transcript_96805.known	chr3	-	5857	13	FSM	ENSG00000070950.10	ENST00000264926.7	5857	13	0	0	0	0	multi-exon	FALSE	canonical	3	99	junction_4	22.2015702647858	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTTATGCTAGTAAGTGCCT	-8959925	True	NA	-4	True	AATAAA	-14	NA	8963472	8877074	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8881460_8890388_8890452_8898893_8899048_8902379_8902521_8912311_8912373_8913643_8913721_8935870_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_96811.nic	chr3	-	1130	7	ISM	ENSG00000070950.10	ENST00000415439.5	1550	12	-81	54493	-10	5756	5prime_fragment	FALSE	canonical	3	120	junction_1	22.9231808923243	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACGTGCAAATGTGTTCCTT	-8959965	False	NA	NA	False	AATAAA	-19	NA	8963512	8935756	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_8936056_8939553_8939654_8941466_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_96812.nic	chr3	-	593	5	ISM	ENSG00000070950.10	ENST00000413832.1	581	6	261	-191	-10	-54	3prime_fragment	FALSE	canonical	3	122	junction_1	21.2779228309532	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATTCAGCCCTCAAAAAGAG	-8959965	False	NA	NA	False	AATAAA	-5	NA	8963512	8941604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_8941805_8947219_8947291_8948508_8948571_8958919_8959002_8963334
transcript_96813.nnic	chr3	-	2007	5	NNC	ENSG00000070950.10	novel	592	4	NA	NA	-10	1479	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	73.1300211951289	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAGAAGATGGAAACACAC	-8959965	False	NA	NA	False	NA	NA	NA	8963512	8945472	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_8945626_8945758_8947291_8948508_8948571_8958919_8959002_8963334
transcript_96814.known	chr3	-	592	4	FSM	ENSG00000070950.10	ENST00000469793.1	592	4	0	0	0	0	multi-exon	FALSE	canonical	3	160	junction_1	8.64098759787715	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTTTCCTGCCCAAGCCC	-8959896	True	NA	NA	False	NA	NA	NA	8963443	8946951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_8947291_8948508_8948571_8958919_8959002_8963334
transcript_96819.nic	chr3	-	587	3	ISM	ENSG00000196220.17	ENST00000490889.2	622	4	23	201104	23	-90320	5prime_fragment	FALSE	canonical	2	5	junction_1	1.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGTACACTTATAGGGTA	-9362750	True	NA	NA	False	AATAGA	-18	NA	9363030	9325841	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_9326169_9330527_9330597_9362839
transcript_96820.known	chr3	-	1554	2	FSM	ENSG00000196220.17	ENST00000490348.1	1554	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAAAAAAAGA	NA	False	NA	NA	False	NA	NA	NA	9249685	9235521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9236275_9248884
transcript_96821.known	chr3	+	457	3	FSM	ENSG00000235830.2	ENST00000449023.2	457	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATATGGTATTTCTTTATG	NA	False	NA	NA	False	AATACA	-23	NA	9249741	9257507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9249822_9256758_9257001_9257372
transcript_96825.known	chr3	+	3754	10	FSM	ENSG00000134077.16	ENST00000452837.7	3754	10	0	0	0	0	multi-exon	FALSE	canonical	3	167	junction_1	80.2745289615579	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358007	True	NA	21	True	AATAAA	-21	NA	9363053	9386791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9363128_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_9683.known	chr1	-	2331	9	FSM	ENSG00000131781.13	ENST00000254090.9	2331	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	3.33307290649335	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTTCTAGGCTCACAGTCAT	-147225214	True	NA	2	True	AATAAA	-15	NA	147225339	147186260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147187246_147190176_147190250_147201151_147201505_147208851_147209052_147212392_147212536_147213307_147213471_147215753_147215943_147224894_147225067_147225286
transcript_96831.known	chr3	+	3961	10	FSM	ENSG00000134077.16	ENST00000345094.7	3961	10	0	0	0	0	multi-exon	FALSE	canonical	3	154	junction_1	83.8841058239077	131	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTTAGTTACAGACCAGA	9358005	True	NA	21	True	AATAAA	-21	NA	9363051	9386791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9363333_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_96834.known	chr3	+	2390	10	FSM	ENSG00000134077.16	ENST00000515662.6	2390	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	128.825271656162	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	9358051	True	NA	5	True	TTTAAA	-18	NA	9363097	9384870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9363729_9365015_9365321_9366907_9366986_9371059_9371537_9374515_9374647_9377818_9377889_9380502_9380619_9383198_9383310_9384211_9384336_9384523
transcript_96866.known	chr3	-	793	5	FSM	ENSG00000206573.10	ENST00000521609.5	793	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	43.3618495915476	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397372	False	NA	-4	True	ATTAAA	-16	NA	9397428	9385794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9388086_9388128_9390279_9390498_9391426_9391827_9397423
transcript_96871.nnic	chr3	-	707	5	NNC	ENSG00000206573.10	novel	793	5	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_3	35.202095108104	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397467	False	NA	-4	True	ATTAAA	-16	NA	9397523	9385794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_9385924_9388086_9388128_9390289_9390498_9391597_9391827_9397423
transcript_96876.nic	chr3	-	626	5	FSM	ENSG00000206573.10	ENST00000685076.1	550	5	-81	5	-19	0	multi-exon	FALSE	canonical	3	50	junction_2	23.466731770743	390	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397467	False	NA	-4	True	ATTAAA	-16	NA	9397523	9385794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9388086_9388128_9390289_9390498_9391678_9391827_9397423
transcript_9688.known	chr1	+	1571	2	FSM	ENSG00000180867.11	ENST00000440377.2	1571	2	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	0	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGCAGCATACTAATTCCC	147172281	True	NA	NA	False	TATAAA	-19	NA	147172770	147175205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147173560_147174423
transcript_96882.nic	chr3	-	600	5	NIC	ENSG00000206573.10	novel	550	5	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_3	40.3050865276332	103	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397467	False	NA	-4	True	ATTAAA	-16	NA	9397523	9385794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_9385924_9388086_9388128_9390289_9390498_9391704_9391827_9397423
transcript_969.known	chr1	-	2428	2	FSM	ENSG00000127054.22	ENST00000496353.1	2428	2	0	0	0	0	multi-exon	FALSE	canonical	3	502	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAGTATGTTTATCTTTTTTG	-1318688	True	NA	-34	True	NA	NA	NA	1324611	1318696	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1321094_1324580
transcript_9690.known	chr1	+	3021	24	FSM	ENSG00000131778.20	ENST00000651231.1	3021	24	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	217.645251674737	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATTTTCTGTTCCTAATGGT	147232610	True	NA	-3	True	NA	NA	NA	147242728	147295746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147242831_147252622_147252736_147254869_147254977_147255812_147255928_147256530_147256563_147259836_147259919_147264421_147264585_147265931_147266088_147267425_147267519_147268781_147268879_147270931_147271006_147272170_147272282_147275353_147275469_147276103_147276258_147280025_147280192_147284350_147284500_147285323_147285488_147286297_147286501_147287634_147287734_147291481_147291553_147293607_147293723_147293924_147294015_147294383_147294518_147295430
transcript_96904.nnic	chr3	-	585	4	FSM	ENSG00000206573.10	ENST00000685952.1	501	4	-84	0	-19	0	multi-exon	FALSE	canonical	2	8	junction_1	44.1588043316392	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCATTTTTTTTCTCTTGG	-9397467	False	NA	-4	True	ATTAAA	-16	NA	9397523	9385794	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9385924_9390289_9390498_9391678_9391827_9397423
transcript_96910.known	chr3	-	667	4	FSM	ENSG00000206573.10	ENST00000467069.6	667	4	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_1	45.5192267069642	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATGATCTTGAATAGTG	-9397373	False	NA	NA	False	NA	NA	NA	9397429	9389491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9389797_9390289_9390498_9391678_9391827_9397423
transcript_96915.known	chr3	-	1897	4	FSM	ENSG00000206573.10	ENST00000481221.7	1897	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_3	32.2628096868343	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395071	True	NA	-30	True	TATAAA	-37	NA	9397474	9388873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391678_9391827_9395505_9395580_9397423
transcript_96916.known	chr3	-	851	4	FSM	ENSG00000206573.10	ENST00000521267.5	851	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	38.0029238641216	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CAGGTTTTAAAGCTAGAAAT	-9396549	False	NA	NA	False	NA	NA	NA	9396605	9389359	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9389797_9390289_9390498_9391678_9391827_9396547
transcript_96925.known	chr3	-	608	3	FSM	ENSG00000254485.5	ENST00000517846.1	608	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	-9362726	True	NA	NA	False	AATAAA	-19	NA	9363006	9349684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9350067_9355800_9355860_9362839
transcript_96926.known	chr3	-	1809	3	FSM	ENSG00000206573.10	ENST00000520447.1	1809	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	56.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTACTATTGTATTAAATATT	-9395092	True	NA	-39	True	TATAAA	-28	NA	9397495	9388882	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391704_9391827_9397423
transcript_96927.known	chr3	-	2095	3	FSM	ENSG00000206573.10	ENST00000664441.2	2116	3	0	21	0	0	multi-exon	FALSE	canonical	3	18	junction_1	47.5	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TATTAAATATTCTCAAATAT	-9395091	True	NA	-30	True	TATAAA	-37	NA	9397494	9388873	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391426_9391827_9397423
transcript_96929.known	chr3	-	583	3	FSM	ENSG00000206573.10	ENST00000489616.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	41.5	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TGCCTAAGTATAAACATAAG	-9396578	False	NA	NA	False	TTTAAA	-19	NA	9396634	9390137	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391678_9391827_9396559
transcript_96930.known	chr3	-	1878	3	FSM	ENSG00000206573.10	ENST00000522525.6	1878	3	0	0	0	0	multi-exon	FALSE	canonical	3	83	junction_1	15	105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACATTTGGTTGAATCTG	-9397448	False	NA	-5	True	ATTAAA	-19	NA	9397504	9388848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391678_9391827_9397423
transcript_96935.known	chr3	-	1161	3	FSM	ENSG00000206573.10	ENST00000522221.2	1161	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	56	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTATAAACATAAGTACATT	-9395070	True	NA	NA	False	TTTAAA	-25	NA	9397473	9390131	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9390498_9391081_9391827_9397423
transcript_96959.known	chr3	-	670	3	FSM	ENSG00000206573.10	ENST00000518437.3	1968	3	0	1298	0	35	multi-exon	FALSE	canonical	1	5	junction_2	14	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGACAGAGTGAGACCTTGC	-9397448	False	NA	NA	False	NA	NA	NA	9397504	9391311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9391827_9395505_9395580_9397423
transcript_96964.known	chr3	+	284	2	FSM	ENSG00000168137.20	ENST00000466826.1	284	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCAGCCCCGCCCACCCTGT	9474995	False	NA	NA	False	NA	NA	NA	9475049	9475659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9475157_9475482
transcript_96965.known	chr3	-	484	2	FSM	ENSG00000254485.5	ENST00000466431.6	484	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAAATTCAGGATTGATCCC	-9362919	False	NA	NA	False	AATAAA	-19	NA	9362941	9349684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9350067_9362839
transcript_96966.known	chr3	-	1831	2	FSM	ENSG00000206573.10	ENST00000469846.3	3045	2	53	1161	1	0	multi-exon	FALSE	canonical	3	113	junction_1	0	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATATATTTTTTCATTTA	-9395038	True	NA	-3	True	AATAAA	-15	NA	9397441	9390013	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9391827_9397423
transcript_9697.known	chr1	-	6956	10	FSM	ENSG00000162836.12	ENST00000583509.7	6956	10	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_1	19.3620476419435	154	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTCTGTTGGCACCCAGG	-147669277	True	NA	NA	False	AATAAA	-23	NA	147670524	147642229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_96971.known	chr3	-	227	2	FSM	ENSG00000254485.5	ENST00000517687.1	227	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTACTTGTGTTCTAATGGAA	-9362698	True	NA	NA	False	AATAAA	-18	NA	9362978	9355771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9355860_9362839
transcript_96972.known	chr3	+	601	3	FSM	ENSG00000134077.16	ENST00000464045.1	601	3	0	0	0	0	multi-exon	FALSE	canonical	3	437	junction_2	2	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGTGGCTCACGACTGTA	NA	False	NA	5	True	TTTAAA	-18	NA	9383179	9384870	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9383310_9384211_9384336_9384523
transcript_96973.known	chr3	-	483	2	FSM	ENSG00000156959.9	ENST00000495730.1	483	2	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATGGGTTGCTGACCTCTTG	-9550956	False	NA	NA	False	NA	NA	NA	9552307	9550611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9551061_9552273
transcript_96974.known	chr3	+	2452	19	FSM	ENSG00000163719.20	ENST00000296003.9	2452	19	0	0	0	0	multi-exon	TRUE	canonical	3	209	junction_17	113.887981026192	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCTTGTGTCATCATTTGGT	9642758	True	NA	21	True	AATAAA	-24	NA	9649504	9702393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9649743_9653620_9653770_9662266_9662376_9668718_9668795_9669431_9669493_9671047_9671171_9672684_9672759_9677316_9677388_9677983_9678059_9683177_9683245_9684584_9684671_9684887_9684965_9685210_9685248_9687820_9687892_9688695_9688755_9688943_9689083_9689963_9690144_9697710_9697867_9701789
transcript_96977.nic	chr3	+	1850	17	ISM	ENSG00000144550.14	ENST00000383832.8	2042	21	1399	0	1399	0	3prime_fragment	TRUE	canonical	0	0	junction_1	12.272778566812	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCTGTCTCATGCATGTTG	9704716	True	NA	4	True	AATAAA	-17	NA	9705231	9729908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_9705501_9705717_9705721_9705986_9706064_9712540_9712605_9712724_9712829_9712974_9713080_9714913_9714956_9715288_9715365_9715472_9715527_9715973_9716036_9717057_9717105_9718028_9718211_9718474_9718603_9725948_9726052_9726664_9726723_9727112_9727187_9729506
transcript_9698.nnic	chr1	-	1224	10	NNC	ENSG00000162836.12	novel	6956	10	NA	NA	-69	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_9	49.0799297694367	16	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	147670593	147647367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_147647567_147648245_147648412_147650142_147650239_147652448_147652550_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147670492
transcript_96996.known	chr3	-	1974	9	FSM	ENSG00000171148.14	ENST00000301964.7	1974	9	0	0	0	0	multi-exon	FALSE	canonical	3	336	junction_3	26.2270733212839	110	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCATCCAGTCTTTGAATGTC	-9792461	False	NA	-3	True	AATAAA	-27	NA	9792473	9779966	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9780550_9784027_9784214_9785315_9785426_9787005_9787110_9787198_9787341_9789508_9789615_9789712_9789964_9791259_9791494_9792215
transcript_970.known	chr1	-	1134	7	FSM	ENSG00000127054.22	ENST00000488042.6	1134	7	0	0	0	0	multi-exon	FALSE	canonical	3	472	junction_3	13.5820551545862	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCGAGGGGCCATGTGCCC	-1318706	True	NA	NA	False	NA	NA	NA	1324629	1314412	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1314963_1315403_1315439_1315519_1315619_1319295_1319525_1320455_1320530_1320995_1321094_1324580
transcript_97003.known	chr3	+	1948	8	FSM	ENSG00000114026.22	ENST00000449570.6	1948	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_7	79.8030739523541	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AATCTGCAGTTTAACAAAAT	9749987	False	NA	NA	False	AAAAAG	-41	NA	9750071	9766540	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9759233_9759287_9765808
transcript_97016.known	chr3	-	1005	8	FSM	ENSG00000156990.14	ENST00000424438.5	1005	8	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_7	332.497659958008	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATAGTCCTCCCTCTGTTCCT	-9836562	True	NA	NA	False	GGGGCT	-10	NA	9843942	9838019	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843724
transcript_97018.known	chr3	+	1630	7	FSM	ENSG00000114026.22	ENST00000344629.12	1630	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_6	43.4766859618143	345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGCAGTGAGGAGTGGTAGGG	9749026	True	NA	16	True	AATAAA	-23	NA	9749951	9757407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9757060
transcript_97019.known	chr3	+	2220	7	FSM	ENSG00000114026.22	ENST00000302036.11	2220	7	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_6	59.4467548876023	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCATCTCTCGTGGTGAAA	NA	False	NA	94	True	NA	NA	NA	9749943	9766737	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766_9756817_9765808
transcript_9702.nic	chr1	-	1790	10	NIC	ENSG00000162836.12	novel	6956	10	NA	NA	-17	0	intron_retention	FALSE	canonical	3	21	junction_3	55.4084719644216	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCCTGCTTTGTGTGTTTG	NA	False	NA	-3	True	AATAAA	-17	NA	147670541	147647367	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_147647567_147648245_147648412_147650142_147650239_147652591_147652648_147654193_147654327_147655160_147655249_147658959_147659040_147659395_147659527_147659646_147659776_147669829
transcript_97037.known	chr3	+	1815	6	FSM	ENSG00000114026.22	ENST00000339511.9	1815	6	0	0	0	0	multi-exon	FALSE	canonical	3	147	junction_4	22.8175371151227	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAATAAAATAGAAACATTT	9749055	False	NA	-14	True	NA	NA	NA	9749980	9757377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9756470_9756622_9756766
transcript_97047.known	chr3	+	1433	6	FSM	ENSG00000241553.13	ENST00000397261.8	1433	6	0	0	0	0	multi-exon	FALSE	canonical	3	427	junction_1	169.624762343238	2043	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTATGCTGTGTGTGTGT	9781246	True	NA	39	True	ATTAAA	-31	NA	9793081	9807101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9793125_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_97049.known	chr3	+	942	6	FSM	ENSG00000241553.13	ENST00000498623.6	942	6	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_1	316.141107735138	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGGCCGGGACAGATTTTTT	9790651	True	NA	-50	True	NA	NA	NA	9792494	9806442	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9792706_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_97051.known	chr3	+	926	6	FSM	ENSG00000241553.13	ENST00000433034.1	926	6	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	320.909083698171	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGATTATACGTTATTGGTTG	9781281	True	NA	80	True	TTTAAA	-33	NA	9793116	9806572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9793182_9797658_9797778_9800184_9800297_9801660_9801757_9803842_9804014_9806209
transcript_97059.known	chr3	+	1950	5	FSM	ENSG00000114026.22	ENST00000349503.9	1950	5	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_4	79.5561908339005	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTAGGGTATTCTTTC	NA	False	NA	25	True	AATAAA	-33	NA	9749943	9766668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9754703_9754886_9765808
transcript_97060.known	chr3	+	747	5	FSM	ENSG00000114026.22	ENST00000429146.5	747	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	83.3981414661022	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAGTGGACTCTTCCACCA	9750341	False	NA	NA	False	NA	NA	NA	9750354	9756865	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9756470_9756622_9756766
transcript_9707.known	chr1	-	891	2	FSM	ENSG00000265107.3	ENST00000430508.1	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTCTGTGGGCATAGTCC	-147773335	False	NA	NA	False	NA	NA	NA	147773354	147758483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_147759272_147773251
transcript_97072.known	chr3	+	1069	4	FSM	ENSG00000114026.22	ENST00000383826.9	1069	4	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	89.4886709154976	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAGCCAGCTTACTAGCACTT	9750002	False	NA	NA	False	NA	NA	NA	9750086	9766112	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9750424_9750944_9751193_9751769_9751950_9765808
transcript_97084.known	chr3	-	807	3	FSM	ENSG00000156990.14	ENST00000433555.1	807	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	405	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAAGATGGCAGCTGCAATA	-9836596	True	NA	NA	False	NA	NA	NA	9843976	9841407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9842083_9842198_9842244_9843889
transcript_97086.known	chr3	-	1225	9	FSM	ENSG00000156990.14	ENST00000383820.9	1225	9	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	72.9373661095601	3892	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836636	True	NA	-13	True	AATAAA	-14	NA	9844016	9837848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_97087.known	chr3	-	955	7	FSM	ENSG00000156990.14	ENST00000418713.5	955	7	0	0	0	0	multi-exon	FALSE	canonical	3	674	junction_1	58.54343117151	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCACTGCACTCCAGTCTAGG	-9836622	True	NA	NA	False	NA	NA	NA	9844002	9839940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9842198_9842244_9843464_9843602_9843889
transcript_97088.known	chr3	-	996	2	FSM	ENSG00000156990.14	ENST00000466141.1	996	2	0	0	0	0	multi-exon	FALSE	canonical	3	612	junction_1	0	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTTACCTCTCTGGACT	-9832333	False	NA	-58	True	NA	NA	NA	9839713	9837893	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9839031
transcript_97089.known	chr3	-	1178	8	FSM	ENSG00000156990.14	ENST00000433535.6	1178	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	247.281629082374	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTATGGTTTTGAGGATTT	-9836634	True	NA	-13	True	AATAAA	-14	NA	9844014	9837848	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9838208_9839031_9839172_9840183_9840308_9840531_9840617_9840697_9840806_9841982_9842083_9843464_9843602_9843889
transcript_97090.known	chr3	-	1178	4	FSM	ENSG00000156990.14	ENST00000433972.1	1178	4	0	0	0	0	multi-exon	FALSE	canonical	3	737	junction_3	48.4722142629729	786	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTCAGTGTGCAGTCATTT	NA	False	NA	-5	True	AATAGA	-15	NA	9844059	9841256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9842083_9842198_9842244_9843464_9843602_9843889
transcript_97092.known	chr3	+	1637	2	FSM	ENSG00000171135.15	ENST00000647897.1	1637	2	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_1	0	2873	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCTGGCAGTATTTATTGCA	9885218	True	NA	11	True	ATTAAA	-25	NA	9890609	9894349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9890812_9892914
transcript_97093.known	chr3	+	1313	2	FSM	ENSG00000171135.15	ENST00000489724.2	1313	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	115	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAAGGTGTGTTGCTTGAAA	9885182	True	NA	64	True	GGGGCT	-12	NA	9890573	9893883	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9890812_9892808
transcript_97095.nic	chr3	+	1997	12	NIC	ENSG00000163703.20	novel	2078	11	NA	NA	-8	0	combination_of_known_junctions	FALSE	canonical	2	26	junction_10	56.5546616298437	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	9933756	False	NA	15	True	AATAAA	-23	NA	9933784	9945032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_97097.known	chr3	+	2192	12	FSM	ENSG00000163703.20	ENST00000683603.1	2192	12	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	61.8735046567786	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATTTATTCATCTCAGGAA	9932523	True	NA	-32	True	NA	NA	NA	9933837	9944985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674_9944096_9944364
transcript_97098.known	chr3	+	1994	12	FSM	ENSG00000163703.20	ENST00000326434.9	1994	12	0	0	0	0	multi-exon	FALSE	canonical	2	26	junction_10	59.804917015021	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCATCAGTCTTACTACCTG	9932541	True	NA	15	True	AATAAA	-23	NA	9933855	9945032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943901_9944096_9944364
transcript_971.known	chr1	+	2154	3	FSM	ENSG00000224051.7	ENST00000343938.9	2154	3	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_1	4	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGTGCCTGATTTCCTGC	1323296	True	NA	23	True	AATAAA	-37	NA	1324801	1328896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_1325103_1326835_1327033_1327240
transcript_97103.known	chr3	+	2093	11	FSM	ENSG00000163703.20	ENST00000674067.2	2093	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_4	56.4680440603356	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	9932529	True	NA	-2	True	AATAAA	-12	NA	9933843	9945385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938018_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_97105.known	chr3	+	2780	11	FSM	ENSG00000163703.20	ENST00000682642.1	2780	11	0	0	0	0	multi-exon	FALSE	canonical	2	14	junction_10	58.637530643778	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GCTTAACATGAGAATTAAAT	9932523	True	NA	-83	True	NA	NA	NA	9933837	9945304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9943674
transcript_97106.known	chr3	+	2127	11	FSM	ENSG00000163703.20	ENST00000682570.1	2127	11	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_9	61.1224999488732	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	9932548	True	NA	-2	True	AATAAA	-12	NA	9933862	9945385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943154_9943380_9943516_9944364
transcript_97108.known	chr3	+	2312	11	FSM	ENSG00000163703.20	ENST00000682783.1	2312	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	54.8747665143096	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATTATGACCAGAGCCTCCA	9932542	True	NA	-2	True	AATAAA	-12	NA	9933856	9945385	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9934081_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9942812_9942897_9943076_9943173_9943380_9943516_9944364
transcript_97110.known	chr3	+	2020	10	FSM	ENSG00000163703.20	ENST00000673935.2	2020	10	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	54.7995223913584	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ACAGATATTCAATAAAAGTG	9932495	True	NA	-29	True	ATTAAA	-36	NA	9933809	9945358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933853_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9940849_9941027_9941110_9941207_9943076_9943173_9943380_9943516_9944364
transcript_97119.known	chr3	+	788	6	FSM	ENSG00000163703.20	ENST00000682355.1	788	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	78.3800995151193	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAAAGTCTCCCGTGTCTACT	9932544	True	NA	NA	False	NA	NA	NA	9933858	9939710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9933921_9934419_9934613_9934834_9934918_9937561_9937673_9938014_9938107_9939463
transcript_97121.known	chr3	+	2131	4	FSM	ENSG00000163703.20	ENST00000465716.2	2131	4	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	2.94392028877595	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAATAAAAGGTCTGTAA	9932524	True	NA	NA	False	AATAAA	-31	NA	9933838	9939177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9934613_9934834_9934918_9937561_9937673_9938014
transcript_97122.known	chr3	+	2198	2	FSM	ENSG00000163703.20	ENST00000684659.1	2198	2	0	0	0	0	multi-exon	FALSE	canonical	3	179	junction_1	0	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATTGGTCATTTTCTCTTTT	9932524	True	NA	5	True	AATAAA	-19	NA	9933838	9936258	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9934613_9934834
transcript_97123.known	chr3	+	3144	6	FSM	ENSG00000163703.20	ENST00000682906.1	3144	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	68.1281146077007	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGTCTTGGAAAGTTAAAAGG	9932532	True	NA	-3	True	AATAAA	-5	NA	9933846	9945014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9934613_9934834_9934918_9940849_9941027_9941110_9941207_9942812_9942897_9943076
transcript_97124.nnic	chr3	+	524	4	NNC	ENSG00000230082.1	novel	614	4	NA	NA	-109	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_1	1.63299316185545	9	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACCACTGGTTTATTG	9947279	False	NA	2	True	AGTAAA	-16	NA	9947294	9954787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_9947406_9948066_9948181_9948354_9948470_9954603
transcript_97125.known	chr3	+	614	4	FSM	ENSG00000230082.1	ENST00000431558.1	614	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	1.24721912892465	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGTACCACTGGTTTATTG	9947388	False	NA	2	True	AGTAAA	-16	NA	9947403	9954787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9947605_9948066_9948181_9948354_9948470_9954603
transcript_97127.known	chr3	-	1475	3	FSM	ENSG00000163704.12	ENST00000411976.2	1475	3	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_2	3.5	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGGGAGAAGTCATTTGCC	-9951105	True	NA	3	True	AATAAA	-19	NA	9952390	9948579	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9948914_9949100_9950173_9952321
transcript_97128.known	chr3	-	3368	5	FSM	ENSG00000163704.12	ENST00000295984.7	3368	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	19.4550764583437	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTCATGCTTCCCTCTGGCCA	-9951089	True	NA	-7	True	AATAAA	-15	NA	9952374	9945541	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_9945712_9946084_9948002_9948757_9948914_9949100_9950173_9952321
transcript_97149.nnic	chr3	+	690	4	FSM	ENSG00000180385.9	ENST00000693066.1	671	4	-23	4	-3	-4	multi-exon	FALSE	canonical	3	24	junction_1	12.2836838484589	406	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGGTTCTTGCAAATC	9983558	True	NA	18	True	AATAAA	-16	NA	9986881	10006986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9987265_9987814_9987906_9988711_9988748_10006806
transcript_97160.nnic	chr3	+	599	3	NIC	ENSG00000180385.9	novel	671	4	NA	NA	-3	-4	combination_of_known_splicesites	FALSE	canonical	3	16	junction_1	17.5	430	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGGTTCTTGCAAATC	9983558	True	NA	18	True	AATAAA	-16	NA	9986881	10006986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_9987265_9988711_9988748_10006806
transcript_97167.nnic	chr3	+	563	2	FSM	ENSG00000180385.9	ENST00000692142.1	564	2	-3	4	-3	-4	multi-exon	FALSE	canonical	2	15	junction_1	0	391	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGACCGGTTCTTGCAAATC	9983558	True	NA	18	True	AATAAA	-16	NA	9986881	10006986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9987265_10006806
transcript_97168.known	chr3	+	2882	2	FSM	ENSG00000180385.9	ENST00000326237.3	2882	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAAAAAAAAAAATCAC	9983587	True	NA	NA	False	NA	NA	NA	9986910	10005244	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_9987265_10002716
transcript_97172.known	chr3	-	854	3	FSM	ENSG00000186162.11	ENST00000424471.2	1136	3	18	264	9	-263	multi-exon	FALSE	canonical	2	6	junction_1	15.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATGGGTTGGCCAAAGGAGAA	-10025592	True	NA	NA	False	GGGGCT	-12	NA	10026357	10017752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10018072_10023529_10023748_10026040
transcript_97173.nnic	chr3	-	1231	3	NNC	ENSG00000186162.11	novel	770	2	NA	NA	3	0	at_least_one_novel_splicesite	FALSE	canonical	1	2	junction_2	6.5	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTGCCTGTGTTCTTTGG	-10025627	True	NA	-1	True	AATAAA	-18	NA	10026392	10017489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_10018072_10023559_10023748_10025931
transcript_97174.known	chr3	-	1088	3	FSM	ENSG00000186162.11	ENST00000424691.2	1130	3	30	12	1	-7	multi-exon	FALSE	canonical	3	15	junction_1	11	125	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGATGTATCTTTGCCTGTGT	-10025600	True	NA	-8	True	AATAAA	-11	NA	10026365	10017496	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10018072_10023559_10023748_10026040
transcript_97176.known	chr3	-	1107	2	FSM	ENSG00000186162.11	ENST00000445082.1	1107	2	0	0	0	0	multi-exon	FALSE	canonical	3	37	junction_1	0	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATTTCATTGAATTCATTAA	-10025561	True	NA	NA	False	AAAAAG	-12	NA	10026326	10022926	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10023748_10026040
transcript_97177.known	chr3	-	1794	3	FSM	ENSG00000186162.11	ENST00000432401.6	1813	3	18	1	9	0	multi-exon	FALSE	canonical	2	3	junction_1	17	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTATGAATCATATAGTCTTT	-10025592	True	NA	NA	False	ATTAAA	-17	NA	10026357	10014237	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10015527_10023559_10023748_10026040
transcript_97178.known	chr3	+	4334	43	FSM	ENSG00000144554.13	ENST00000676013.1	4334	43	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_17	24.3087659039541	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCCCAGATAAATTGTTGC	10017807	True	NA	-20	True	NA	NA	NA	10026416	10101261	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870_10072982_10073252_10073363_10074529_10074674_10078080_10078198_10081099_10081229_10081345_10081465_10085811_10085923_10087133_10087265_10088448_10088543_10088827_10088951_10090291_10090386_10092180_10092253_10093284_10093324_10094288_10094364_10095199_10095275_10096325_10096473_10098719_10098816_10101187
transcript_97179.nic	chr3	+	2710	27	ISM	ENSG00000144554.13	ENST00000287647.7	5219	43	-29	26696	15	0	5prime_fragment	FALSE	canonical	3	68	junction_1	16.1624519201452	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAGAAAGGAAAAATAGGTA	10017775	True	NA	16	True	NA	NA	NA	10026384	10072964	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791_10063912_10064355_10064430_10064728_10064876_10065393_10065495_10065863_10065980_10067208_10067318_10072870
transcript_97187.nic	chr3	+	1778	17	ISM	ENSG00000144554.13	ENST00000287647.7	5219	43	-29	50044	15	112	5prime_fragment	FALSE	canonical	3	68	junction_1	16.9921857040229	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTATGTGTTAATTCATTCA	10017775	True	NA	NA	False	AATAAA	-15	NA	10026384	10049616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10041622_10041711_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373
transcript_9719.nnic	chr1	+	1833	15	NNC	ENSG00000188092.15	novel	1954	14	NA	NA	-19	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_14	65.6946010890157	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926069	True	NA	NA	False	ATTAAA	-15	NA	147928373	147993339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710_147992949_147993068
transcript_97194.nic	chr3	+	965	10	NIC	ENSG00000144554.13	novel	2145	21	NA	NA	15	0	combination_of_known_junctions	FALSE	canonical	1	4	junction_9	39.5496250235849	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AACTTTTTATTGTACTAGAA	10017775	True	NA	NA	False	AATAAA	-17	NA	10026384	10040684	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10040536
transcript_97199.known	chr3	+	2145	21	FSM	ENSG00000144554.13	ENST00000682647.1	2145	21	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	40.3083117979406	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGCAATAAAGCATGAGAGCT	10017760	True	NA	NA	False	NA	NA	NA	10026369	10063935	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10026474_10028624_10028722_10032298_10032424_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720_10039846_10042558_10042664_10043049_10043151_10043483_10043593_10043828_10043865_10046579_10046724_10047916_10048052_10049373_10049506_10052386_10052498_10060293_10060404_10062150_10062212_10063791
transcript_972.known	chr1	-	1171	4	FSM	ENSG00000162576.17	ENST00000474033.5	1171	4	0	0	0	0	multi-exon	FALSE	canonical	3	47	junction_3	4.98887651569859	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTCCCAGGTATGCTTCT	-1354112	False	NA	-5	True	AATAAA	-21	NA	1354264	1352688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1353630_1353847_1353929_1354029_1354107_1354192
transcript_97201.nic	chr3	+	372	4	ISM	ENSG00000144554.13	ENST00000287647.7	5219	43	-29	65147	15	0	5prime_fragment	FALSE	canonical	3	68	junction_1	30.1588387633801	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAGACACCCTTCCTATCCC	10017775	True	NA	NA	False	NA	NA	NA	10026384	10034513	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026474_10028624_10028722_10032831_10032973_10034468
transcript_97203.nic	chr3	+	329	3	ISM	ENSG00000144554.13	ENST00000419585.5	5185	44	-66	69061	-4	518	5prime_fragment	FALSE	canonical	3	36	junction_1	50	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTCATATTGCTAATGAAGT	10017823	True	NA	NA	False	AAAAAG	-10	NA	10026432	10032869	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_10026627_10028624_10028722_10032831
transcript_97204.known	chr3	+	2450	8	FSM	ENSG00000144554.13	ENST00000431693.1	2450	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_6	14.2614078934038	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTGTCTGCCCAGCTCTGTTC	10020010	False	NA	NA	False	AATAAA	-17	NA	10028619	10041562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10028722_10032831_10032973_10034468_10034537_10034694_10034799_10035172_10035234_10036286_10036340_10039278_10039358_10039720
transcript_97211.known	chr3	+	1150	3	FSM	ENSG00000254999.4	ENST00000530758.2	1150	3	0	0	0	0	multi-exon	FALSE	canonical	3	1802	junction_2	19.5	10511	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGATGCTTACAGTCTTTT	10093997	True	NA	20	True	AATAAA	-21	NA	10115674	10127190	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10115820_10125625_10125709_10126268
transcript_97225.nnic	chr3	+	1980	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-17	-146	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	68	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAATGTTTGTTTTTCATTTC	10141739	False	NA	14	True	ATTAAA	-16	NA	10141760	10153521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_97227.nnic	chr3	+	2200	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-91	0	at_least_one_novel_splicesite	FALSE	non_canonical	0	0	junction_3	37.5972812255827	118	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	NA	False	NA	10	True	ATTAAA	-20	NA	10141686	10153667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153234
transcript_97229.nnic	chr3	+	1856	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-4	-91	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5972812255827	78	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGACGGTGAAGTTCCTATT	10136529	True	NA	7	True	ATTAAA	-15	NA	10141773	10153576	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153400
transcript_97230.nnic	chr3	+	1947	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5972812255827	113	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10136529	True	NA	10	True	ATTAAA	-20	NA	10141773	10153667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150930_10153400
transcript_97235.nnic	chr3	+	1998	4	NNC	ENSG00000134086.8	novel	4414	3	NA	NA	-4	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	37.5972812255827	95	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10136529	True	NA	10	True	ATTAAA	-20	NA	10141773	10153667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_10142188_10146513_10146637_10149786_10150945_10153364
transcript_97238.known	chr3	+	4414	3	FSM	ENSG00000134086.8	ENST00000256474.3	4414	3	0	0	0	0	multi-exon	FALSE	canonical	3	65	junction_1	12	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGCAGGGTGTGTTGTGTG	10136533	True	NA	10	True	ATTAAA	-20	NA	10141777	10153667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10142188_10146513_10146637_10149786
transcript_9724.known	chr1	+	1954	14	FSM	ENSG00000188092.15	ENST00000488165.5	1954	14	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	63.4356590588975	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926088	True	NA	NA	False	ATTAAA	-15	NA	147928392	147993339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943976_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_97242.known	chr3	+	2696	2	FSM	ENSG00000134086.8	ENST00000345392.2	2696	2	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	0	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCAGGCCGGGCATGGTGGCT	10136543	True	NA	NA	False	NA	NA	NA	10141787	10152082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_10142188_10149786
transcript_97259.known	chr3	-	1363	10	FSM	ENSG00000157020.18	ENST00000337354.8	1363	10	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_9	442.807987258865	1010	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305351	True	NA	-4	True	AATAAA	-17	NA	10321082	10300930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319173_10321049
transcript_97260.known	chr3	-	1479	10	FSM	ENSG00000157020.18	ENST00000383801.6	1479	10	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	447.910815637926	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AGGAACTAAATAAAGTCATA	-10305353	True	NA	-34	True	NA	NA	NA	10321084	10300960	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10319138_10319317_10321049
transcript_9727.known	chr1	+	2160	14	FSM	ENSG00000188092.15	ENST00000314163.12	2160	14	0	0	0	0	multi-exon	FALSE	canonical	3	120	junction_1	36.5584560677714	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGATGTTTCCTTTTTTTTT	147926115	True	NA	80	True	NA	NA	NA	147928419	147993592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_97274.known	chr3	-	1467	9	FSM	ENSG00000157020.18	ENST00000397109.7	1467	9	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_8	365.144984047433	869	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305310	True	NA	-4	True	AATAAA	-17	NA	10321041	10300930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320870
transcript_97275.known	chr3	-	1603	9	FSM	ENSG00000157020.18	ENST00000397117.5	1603	9	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_8	428.242629825663	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAGTCATATTGCTTATAAT	-10305330	True	NA	-23	True	ACTAAA	-2	NA	10321061	10300949	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301148_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10320508
transcript_97281.known	chr3	-	656	4	FSM	ENSG00000157017.16	ENST00000481287.5	656	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCTGATGTTCCAAATGGGA	NA	False	NA	NA	False	AATAAA	-14	NA	10290357	10285749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10285895_10286703_10286813_10289761_10289879_10290072
transcript_97282.known	chr3	-	1359	9	FSM	ENSG00000157020.18	ENST00000350697.8	1359	9	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_8	121.040734362445	3239	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCCTGCTGCGTTATCCTAA	-10305381	True	NA	-4	True	AATAAA	-17	NA	10321112	10300930	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10301375_10304025_10304173_10305032_10305157_10305558_10305693_10311964_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_97283.known	chr3	-	883	5	FSM	ENSG00000157020.18	ENST00000397105.7	883	5	0	0	0	0	multi-exon	FALSE	canonical	3	790	junction_4	151.01552072552	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGTCATTCTTTACCCAACTT	-10305362	True	NA	NA	False	TATAAA	-4	NA	10321093	10311572	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10312099_10312578_10312731_10315320_10315437_10318049_10318095_10321049
transcript_97284.known	chr3	-	401	3	FSM	ENSG00000157017.16	ENST00000422159.5	401	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGCTGATGTTCCAAATGGG	-10290199	False	NA	NA	False	AATAAA	-13	NA	10290212	10285750	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_10285895_10289761_10289879_10290072
transcript_97287.known	chr3	+	4959	19	FSM	ENSG00000197548.13	ENST00000354449.7	4959	19	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_11	11.1964776207123	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATAGTAAGTATTAAGGTTT	11270149	True	NA	NA	False	AATAAA	-17	NA	11272415	11557665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339_11331429_11332971_11333094_11340644_11340736_11342134_11342280_11347876_11348036_11358417_11358613_11360580_11360785_11362812_11362929_11364658_11364735_11379971_11380053_11426803_11426927_11554810
transcript_97295.nic	chr3	+	989	8	ISM	ENSG00000197548.13	ENST00000354956.9	2296	18	-41	223499	0	191	5prime_fragment	FALSE	canonical	3	89	junction_1	7.70369643583586	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCCATACTAGTGAACCTT	11270108	True	NA	NA	False	AATAAA	-16	NA	11272374	11331584	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_11272431_11298685_11298856_11299361_11299417_11306942_11307061_11308983_11309062_11313303_11313421_11315343_11315494_11331339
transcript_97297.known	chr3	+	647	5	ISM	ENSG00000197548.13	ENST00000435760.6	2618	20	-49	255668	0	230	5prime_fragment	FALSE	canonical	2	4	junction_1	45.1850362398881	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGTGCTTTTGACATGTGA	11270081	True	NA	NA	False	NA	NA	NA	11272347	11299400	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_11272431_11280993_11281103_11282192_11282439_11298685_11298856_11299361
transcript_97299.known	chr3	-	3725	6	FSM	ENSG00000144560.16	ENST00000273038.7	3725	6	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_5	44.2013574452188	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACATAGTGTACGTGTGCAGT	-11720528	True	NA	-5	True	AATAAA	-14	NA	11720746	11556069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11702970_11703048_11720393
transcript_97302.known	chr3	-	3775	5	FSM	ENSG00000144560.16	ENST00000430365.7	3775	5	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	21.9928965804871	51	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATAGTGTACGTGTGCAGTT	-11642759	True	NA	-4	True	AATAAA	-15	NA	11643915	11556068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11601832_11602023_11643436
transcript_97304.known	chr3	-	938	4	FSM	ENSG00000144560.16	ENST00000451674.6	938	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_3	54.7803695577977	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGTGGAACATCTGTCTAAT	-11582278	True	NA	-6	True	NA	NA	NA	11582391	11558342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11558828_11559331_11559456_11564796_11565020_11582285
transcript_97317.known	chr3	-	1213	8	FSM	ENSG00000144559.11	ENST00000455809.6	1326	8	113	0	7	0	multi-exon	FALSE	canonical	3	175	junction_5	17.4027912375326	526	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846772	11790441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11790582_11807832_11807896_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_9732.nic	chr1	+	1847	13	NIC	ENSG00000188092.15	novel	2160	14	NA	NA	0	0	combination_of_known_junctions	FALSE	canonical	2	13	junction_1	61.6591774731602	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTTTTGCCTTACGTTCAT	147926115	True	NA	NA	False	ATTAAA	-15	NA	147928419	147993339	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_147928579_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968874_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_97320.known	chr3	-	1297	7	FSM	ENSG00000144559.11	ENST00000273037.9	1297	7	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	71.3335280371174	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTGTTTGTTACTTTGACC	NA	False	NA	-1	True	AATAAA	-24	NA	11846919	11790441	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_11790582_11809516_11809683_11817191_11817338_11829713_11829865_11839221_11839315_11844028_11844212_11846501
transcript_97326.known	chr3	+	3320	13	FSM	ENSG00000157152.17	ENST00000621198.5	3320	13	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_12	9.54339503996816	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TATCTGAATGTTAATAAGTA	12003834	True	NA	NA	False	AATAAA	-24	NA	12004387	12192032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12004929_12140650_12140709_12141904_12141997_12145678_12145836_12151236_12151327_12161545_12161609_12162011_12162155_12167233_12167309_12168375_12168479_12169756_12169907_12183311_12183373_12187368_12187613_12190489
transcript_97327.known	chr3	-	1194	5	FSM	ENSG00000157150.5	ENST00000287814.5	1194	5	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_3	5.30919014539883	266	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATACTGTGGCTGTGTATCC	-12156465	True	NA	-24	True	CATAAA	-31	NA	12158912	12153067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12153713_12154326_12154452_12156819_12156935_12157384_12157483_12158701
transcript_97331.known	chr3	-	3191	17	FSM	ENSG00000132155.14	ENST00000251849.9	3191	17	0	0	0	0	multi-exon	FALSE	canonical	3	317	junction_16	36.6461116627672	171	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656362	True	NA	-26	True	AATAAA	-22	NA	12664117	12583600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_97332.known	chr3	-	2354	16	FSM	ENSG00000132155.14	ENST00000684903.1	3129	16	76	699	0	-405	multi-exon	FALSE	canonical	3	14	junction_14	96.6267503794311	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGGAGAAGGAAGCCATTTGC	-12656370	True	NA	NA	False	NA	NA	NA	12664125	12584332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12606200_12606300_12608765_12608924_12609232_12609336_12618514_12618748_12663812
transcript_97333.nic	chr3	-	3126	16	FSM	ENSG00000132155.14	ENST00000688543.1	4662	16	36	1500	0	0	multi-exon	FALSE	canonical	3	50	junction_11	89.6349634164407	161	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGCTGGCTGTTACCTCCTT	-12656396	True	NA	-26	True	AATAAA	-22	NA	12664151	12583600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12584658_12584846_12584982_12585121_12585254_12585680_12585800_12587590_12587638_12590797_12590975_12591707_12591793_12599690_12599809_12600151_12600280_12600387_12600416_12604135_12604290_12608765_12608924_12609232_12609336_12611949_12612063_12618514_12618748_12663812
transcript_97336.known	chr3	+	2136	14	FSM	ENSG00000154743.19	ENST00000680923.1	2136	14	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_6	43.8283364608227	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGCTGTAAATGGAT	12481987	True	NA	1	True	AATAAA	-11	NA	12484434	12539618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12506707_12506836_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_97339.known	chr3	+	2062	13	FSM	ENSG00000154743.19	ENST00000681482.1	2062	13	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_12	30.1343058471386	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATATGAAAATAATTTTGT	12481973	True	NA	41	True	TTTAAA	-9	NA	12484420	12539658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_97344.known	chr3	+	2444	12	FSM	ENSG00000154743.19	ENST00000679699.1	2444	12	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	21.4691783688783	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	70	TGTCTCAAAAAAAAAAAAAA	12481973	True	NA	NA	False	AATAGA	-10	NA	12484420	12533653	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97346.known	chr3	+	1912	12	FSM	ENSG00000154743.19	ENST00000446004.6	1912	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	34.3549772639994	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATGCTGTAAATGGATTC	12481973	True	NA	3	True	AATAAA	-13	NA	12484420	12539620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12539160
transcript_97348.known	chr3	+	1930	12	FSM	ENSG00000154743.19	ENST00000679670.1	1930	12	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	36.24252559021	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ACTTTATGCTGTAAATGGAT	12481987	True	NA	1	True	AATAAA	-11	NA	12484434	12539618	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661_12532774_12539160
transcript_97349.known	chr3	+	2149	12	FSM	ENSG00000154743.19	ENST00000402228.7	2149	12	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_1	33.8509128018826	34	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GTCATGAAGACTTAAGTTGC	12482043	True	NA	32	True	AATAAA	-24	NA	12484490	12533317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97350.known	chr3	+	1941	12	FSM	ENSG00000154743.19	ENST00000680857.1	1941	12	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_11	41.1821192041978	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAAAACCTCATTGATAT	12482079	True	NA	27	True	AATAAA	-37	NA	12484526	12539644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484629_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12539160
transcript_97351.known	chr3	+	2753	12	FSM	ENSG00000154743.19	ENST00000284995.11	2753	12	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	32.9622874918325	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	CAAAAAAAAAAAAAAAAAAA	12482032	True	NA	NA	False	AATAGA	-15	NA	12484479	12533658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97353.known	chr3	+	2023	11	FSM	ENSG00000154743.19	ENST00000681073.1	2023	11	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_8	37.1208836101729	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AATATAATAAAGCCTTTTTG	12481987	True	NA	-2	True	AATGAA	-20	NA	12484434	12533283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12516610_12516662_12519058_12519198_12529761_12529874_12531569_12531660_12532661
transcript_97354.known	chr3	+	2373	11	FSM	ENSG00000154743.19	ENST00000679756.1	2373	11	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_6	35.6119362012233	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGGTCCTGTCTCAAAAAAAA	12481987	True	NA	NA	False	AATAGA	-4	NA	12484434	12533647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97356.known	chr3	+	2358	11	FSM	ENSG00000154743.19	ENST00000415684.6	2358	11	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	29.9573029493645	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	12481987	True	NA	NA	False	AATAGA	-16	NA	12484434	12533659	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97358.known	chr3	+	2293	11	FSM	ENSG00000154743.19	ENST00000681676.1	2293	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	39.344631145812	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTAATTGGTGAGAAAGTCA	12482057	True	NA	16	True	AATAAA	-8	NA	12484504	12533301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12516610_12516662_12519058_12519198_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97359.known	chr3	+	2107	10	FSM	ENSG00000154743.19	ENST00000681433.1	2107	10	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_6	36.3606760860149	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATTGTAGCACATGCCTGTAA	12481987	True	NA	NA	False	NA	NA	NA	12484434	12533520	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153_12505232_12528887_12528925_12529761_12529874_12531569_12531660_12532661
transcript_97366.known	chr3	+	1679	8	FSM	ENSG00000075975.17	ENST00000448482.1	1679	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	68.4039621719117	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TATTTTTCTTACCAAAGGAG	12554340	True	NA	-45	True	AGTAAA	-25	NA	12557089	12582626	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12557177_12568874_12568998_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_97378.known	chr3	+	1436	7	FSM	ENSG00000075975.17	ENST00000411987.5	1436	7	0	0	0	0	multi-exon	FALSE	canonical	2	44	junction_1	56.1231285260859	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GGGGTAACAACTAACAAACA	12554337	True	NA	61	True	NA	NA	NA	12557086	12582503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12557177_12570070_12570253_12572068_12572374_12574791_12575007_12576630_12576742_12581807_12581953_12582115
transcript_97380.nic	chr3	+	1556	6	ISM	ENSG00000154743.19	ENST00000680873.1	2151	12	20	27485	12	32	5prime_fragment	FALSE	canonical	3	95	junction_1	15.1657508881031	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAAAAGGCTTTATGTTGAT	12482007	True	NA	NA	False	AATGAA	-26	NA	12484454	12505798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_97383.known	chr3	+	1587	6	FSM	ENSG00000154743.19	ENST00000490981.2	1587	6	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_1	40.5038269796818	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGTCAGGAGTTCGAGACCAG	12482115	True	NA	NA	False	NA	NA	NA	12484562	12505574	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484881_12489783_12489990_12492135_12492218_12496517_12496555_12503261_12503785_12505153
transcript_97384.known	chr3	+	2913	5	FSM	ENSG00000154743.19	ENST00000679537.1	2913	5	0	0	0	0	multi-exon	FALSE	canonical	3	95	junction_1	14.7372826531895	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAATGAAACTCTGTCTCAAA	12481987	True	NA	NA	False	NA	NA	NA	12484434	12505766	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_12484518_12489783_12489990_12492135_12492218_12496517_12496555_12503261
transcript_97387.known	chr3	-	1124	4	FSM	ENSG00000225526.6	ENST00000564146.4	1124	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	4.02768199119819	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGTGTATGGCTTTCCTTCAA	-12545477	True	NA	NA	False	AATAAA	-17	NA	12545499	12539775	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12540434_12541859_12542023_12543179_12543230_12545246
transcript_97388.known	chr3	-	901	3	FSM	ENSG00000225526.6	ENST00000561645.2	901	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CCTTACTAAAAATATAAAAT	-12545500	True	NA	NA	False	NA	NA	NA	12545522	12539971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12540434_12541859_12542023_12545246
transcript_97389.known	chr3	-	984	12	FSM	ENSG00000088726.16	ENST00000264728.8	984	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.287479787288034	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGGCAGAGCAGCATTCTGA	NA	False	NA	NA	False	NA	NA	NA	12769457	12734706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12734794_12735554_12735618_12736577_12736653_12736763_12736836_12737706_12737755_12738135_12738169_12738552_12738589_12742453_12742508_12743899_12743990_12748654_12748793_12749759_12749841_12769250
transcript_97391.known	chr3	-	507	5	FSM	ENSG00000088726.16	ENST00000480698.1	507	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	0.433012701892219	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATAAACAGAACACTTTTCCT	NA	False	NA	NA	False	NA	NA	NA	12737868	12734658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12734794_12735554_12735618_12736577_12736653_12736763_12736836_12737706
transcript_97413.known	chr3	-	555	4	FSM	ENSG00000144713.13	ENST00000457131.1	555	4	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	7894.08894187431	756	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGAGTAGGCAGCTCATGTG	-12641201	True	NA	-87	True	AAGAAA	-1	NA	12841544	12836101	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840342_12841493
transcript_97420.known	chr3	-	2094	4	FSM	ENSG00000144713.13	ENST00000429711.7	2094	4	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_3	2364.05870391485	126254	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAACCGTTTTGAATTTTAA	-12641222	True	NA	-26	True	NA	NA	NA	12841565	12834484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839531_12840141_12840243_12841493
transcript_97421.known	chr3	-	1734	3	FSM	ENSG00000144713.13	ENST00000396953.6	1734	3	0	0	0	0	multi-exon	FALSE	canonical	3	16028	junction_1	687.5	1630	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTAAAAACTGCCATCTGGCA	-12641186	True	NA	-45	True	AATAAA	-2	NA	12841529	12836059	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839531_12840141
transcript_97422.known	chr3	-	567	4	FSM	ENSG00000144713.13	ENST00000273223.10	567	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	6787.9220842775	4138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCATCTTCCTTCCTTG	-12641203	True	NA	-32	True	AATAAA	-15	NA	12841546	12836046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12836224_12839348_12839585_12840141_12840243_12841493
transcript_97423.known	chr3	-	631	3	FSM	ENSG00000144713.13	ENST00000452606.2	631	3	0	0	0	0	multi-exon	FALSE	canonical	3	11844	junction_2	2779.5	2002	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCTGTTGTTTCCAAAATGTT	-12641200	True	NA	NA	False	NA	NA	NA	12841543	12839050	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_12839531_12840141_12840243_12841493
transcript_97424.nnic	chr3	-	414	2	NNC	ENSG00000132182.12	novel	7206	40	NA	NA	51	-62235	at_least_one_novel_splicesite	FALSE	canonical	3	34	junction_1	0	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGGTTTACATATTTTTTT	-13415284	True	NA	0	True	AATAAA	-22	NA	13420258	13413897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_13414113_13420059
transcript_97425.known	chr3	+	2819	10	FSM	ENSG00000163517.15	ENST00000295757.8	2819	10	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	13.2506696779287	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTTCTGAGTCCTGTGGAGT	13479519	True	NA	11	True	AATAAA	-19	NA	13480305	13506416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13496735_13496853_13498512_13498556_13500712_13500790_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_97428.known	chr3	+	1018	7	FSM	ENSG00000163517.15	ENST00000402271.5	1018	7	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_3	20.2813543269017	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCAGAAGGGCTTGAGGCCT	13479516	True	NA	NA	False	NA	NA	NA	13480302	13504849	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13480350_13481245_13481395_13483463_13483565_13501870_13501934_13502883_13502981_13504093_13504273_13504467
transcript_97435.known	chr3	+	524	2	FSM	ENSG00000224514.3	ENST00000438915.1	524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAAGGGCAATCTGTCAGGCA	NA	False	NA	NA	False	AATAAA	-8	NA	13650695	13746629	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_13650834_13746243
transcript_97436.known	chr3	-	1603	4	FSM	ENSG00000163528.13	ENST00000295767.9	1603	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	174.568038311714	209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-14120064	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14113195_14116425_14116525_14121916_14122087_14124654
transcript_97443.known	chr3	-	1433	3	FSM	ENSG00000163528.13	ENST00000396914.4	1433	3	0	0	0	0	multi-exon	FALSE	canonical	3	410	junction_2	0.5	2070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGAATGTGTCCTTTGTT	-14120064	True	NA	-1	True	ATTAAA	-23	NA	14124870	14112076	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14113195_14116425_14116525_14124654
transcript_97446.known	chr3	-	3650	16	FSM	ENSG00000154767.15	ENST00000285021.12	3650	16	0	0	0	0	multi-exon	FALSE	canonical	3	268	junction_8	24.007776517898	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGGCTCTATATTTTCT	-14173598	True	NA	-11	True	AATAAA	-14	NA	14178601	14145146	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14146160_14147289_14147380_14147907_14148002_14148561_14148732_14148813_14148949_14152334_14152417_14156334_14156496_14158010_14158893_14159740_14159831_14164812_14164934_14165427_14165586_14167168_14167254_14168256_14168381_14170437_14170551_14172866_14173063_14178465
transcript_97448.known	chr3	+	3230	12	FSM	ENSG00000170876.8	ENST00000306077.5	3230	12	0	0	0	0	multi-exon	FALSE	canonical	3	216	junction_9	20.5880491692399	95	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTGGTGTGGGACTTTAAC	14122105	True	NA	22	True	AATAAA	-14	NA	14125051	14143680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14125206_14129411_14129562_14130821_14130957_14131579_14131675_14132545_14132596_14132865_14132936_14133738_14133810_14134769_14134892_14135157_14135233_14135806_14135909_14139179_14139298_14141592
transcript_9745.nic	chr1	+	465	3	ISM	ENSG00000188092.15	ENST00000488165.5	1954	14	-19	54426	-19	-27732	5prime_fragment	FALSE	canonical	3	120	junction_1	18.5	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACTGTGTTAATAGTTCAGT	147926069	True	NA	NA	False	NA	NA	NA	147928373	147938913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_147928579_147936626_147936687_147938713
transcript_97457.known	chr3	-	557	4	FSM	ENSG00000154767.15	ENST00000511155.1	557	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	155.597772049174	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACAAGAGAAAGAAGGTAAGC	-14173618	True	NA	NA	False	NA	NA	NA	14178621	14168270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14168381_14170437_14170551_14172866_14173063_14178483
transcript_9746.known	chr1	+	2633	14	FSM	ENSG00000188092.15	ENST00000478307.5	2633	14	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_8	68.1588815642883	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGATTTCAGTTATGTCATT	147926088	True	NA	9	True	AATAGA	-14	NA	147928392	147993521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_147928579_147936626_147936687_147938713_147938818_147943437_147943545_147943996_147944099_147953344_147953466_147954321_147954403_147966553_147966664_147968357_147968964_147969866_147969960_147986198_147986295_147988431_147988522_147992501_147992568_147992710
transcript_97463.known	chr3	+	3359	4	FSM	ENSG00000170860.4	ENST00000306024.4	3359	4	0	0	0	0	multi-exon	FALSE	canonical	3	2520	junction_1	773.395543474791	19573	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCACAGTTGATGTTTCTCTG	14146216	True	NA	6	True	AATAAA	-33	NA	14178816	14201122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14178882_14181559_14181671_14183936_14184033_14198035
transcript_97470.known	chr3	+	1983	11	FSM	ENSG00000131389.18	ENST00000610642.4	1983	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	121.386201851776	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAATACAAGATGCAGAGT	14385118	True	NA	NA	False	NA	NA	NA	14402575	14478901	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581_14447817_14457949_14458083_14466515_14466651_14467852_14467957_14472204_14472318_14477204_14477343_14478465
transcript_97474.known	chr3	+	1252	5	FSM	ENSG00000131389.18	ENST00000621751.4	1252	5	0	0	0	0	multi-exon	FALSE	canonical	3	375	junction_2	32.7671710710583	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCATATATGAAGCTGAAGT	14385162	True	NA	107	True	AATATA	-24	NA	14402619	14448188	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14402848_14416411_14416454_14443623_14443864_14445716_14445852_14447581
transcript_97477.known	chr3	+	2940	11	FSM	ENSG00000154781.17	ENST00000383794.7	2940	11	0	0	0	0	multi-exon	TRUE	canonical	3	124	junction_7	28.3788653754867	346	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTAACCCAGCTGCCTTTTTT	14649700	True	NA	7	True	AATAAA	-17	NA	14651761	14672655	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048_14668182_14669933_14670087_14670895
transcript_97481.nic	chr3	+	1003	9	ISM	ENSG00000154781.17	ENST00000383794.7	2940	11	-10	4508	-10	849	5prime_fragment	FALSE	canonical	3	124	junction_7	30.4156107122642	63	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	TCAAAAGAAGGTGGAACAGA	14649690	True	NA	NA	False	AAAAAG	-10	NA	14651751	14668147	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804_14666948_14667423_14667519_14668048
transcript_97483.known	chr3	+	1139	7	FSM	ENSG00000154781.17	ENST00000465759.1	1139	7	0	0	0	0	multi-exon	FALSE	canonical	3	170	junction_5	13.832329280831	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTTCTTTTTAAAACTTGT	14649711	True	NA	NA	False	NA	NA	NA	14651772	14667298	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14651879_14654425_14654531_14655528_14655630_14658870_14658930_14661529_14661708_14665027_14665124_14666804
transcript_97487.known	chr3	+	5768	19	FSM	ENSG00000154783.12	ENST00000543601.5	5768	19	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_17	16.3406068460986	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CACTAAGTGATTAGACAGTG	14818941	False	NA	67	True	ATTAAA	-19	NA	14818961	14934565	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_14821597_14864127_14864261_14880571_14880631_14880741_14880773_14897508_14897670_14897938_14898096_14898738_14898827_14900402_14900454_14901002_14901062_14907639_14907712_14910860_14910930_14917248_14917333_14918753_14918834_14921917_14922018_14922410_14922549_14923045_14923176_14924007_14924139_14932576_14932732_14933130
transcript_97488.known	chr3	+	698	5	FSM	ENSG00000177463.16	ENST00000439011.5	698	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	19.4036079119323	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTGTAATACTACCCTTCCT	15032413	True	NA	8	True	AATAAA	-23	NA	15032426	15053600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15032501_15034669_15034810_15037999_15038138_15039121_15039228_15053360
transcript_97491.known	chr3	-	1527	2	FSM	ENSG00000225733.7	ENST00000440079.1	1527	2	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCTTTGTGGTTGTGTACT	-14943378	True	NA	-3	True	NA	NA	NA	14947505	14945023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14946155_14947109
transcript_97492.known	chr3	-	3818	2	FSM	ENSG00000225733.7	ENST00000655923.1	3818	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCTCACGTAATTGCTGTTAG	-14947378	False	NA	-18	True	AATAAA	-9	NA	14947538	14942788	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14946155_14947086
transcript_97493.known	chr3	-	3754	2	FSM	ENSG00000225733.7	ENST00000665738.1	3754	2	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	0	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTTAAACCTCACGTAATT	-14943382	True	NA	-26	True	AATAAA	-1	NA	14947509	14942796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14946155_14947113
transcript_97494.known	chr3	-	1874	2	FSM	ENSG00000225733.7	ENST00000426200.1	1874	2	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAAAAAAAAAGTTGGGG	-14948264	True	NA	NA	False	NA	NA	NA	14948424	14944692	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_14946155_14948012
transcript_97506.known	chr3	-	4572	4	FSM	ENSG00000131368.8	ENST00000253686.7	4572	4	0	0	0	0	multi-exon	FALSE	canonical	3	677	junction_2	40.0860186210715	2916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTTGCATGTATAAATATCA	-15049708	True	NA	NA	False	AATAAA	-21	NA	15065315	15048511	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15052634_15053379_15053468_15059368_15059476_15065060
transcript_97507.known	chr3	-	1119	4	FSM	ENSG00000131368.8	ENST00000449354.6	1119	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	340.917389797978	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATAATGCCACATTGAAACA	-15049653	True	NA	NA	False	TATAAA	-32	NA	15065260	15049211	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15049936_15053379_15053468_15059368_15059476_15065060
transcript_97509.known	chr3	-	6678	14	FSM	ENSG00000131381.12	ENST00000253699.7	6678	14	0	0	0	0	multi-exon	FALSE	canonical	3	46	junction_12	16.7579355043175	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGGGGGTGTGTGTGTCTG	-15096854	True	NA	-8	True	AATAAA	-14	NA	15099148	15070072	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15098118_15098275_15099034
transcript_9751.known	chr1	+	1148	6	FSM	ENSG00000274372.5	ENST00000665117.1	1148	6	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	2.99332590941915	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCAACCTTTGGTATCTTT	NA	False	NA	1	True	AATAAA	-17	NA	148013202	148025928	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148013554_148016160_148016259_148019936_148020209_148021913_148021999_148024529_148024720_148025776
transcript_97510.known	chr3	-	3005	13	FSM	ENSG00000131381.12	ENST00000476527.6	3005	13	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_12	12.4498995979887	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AATAATAAAATAGAAACTAG	-15096869	True	NA	-36	True	NA	NA	NA	15099163	15073604	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15074931_15075605_15075711_15077061_15077165_15078074_15078162_15080731_15080803_15082366_15082609_15084734_15084897_15084999_15085046_15085860_15085962_15090398_15090540_15095972_15096289_15096534_15096711_15099034
transcript_97512.nic	chr3	-	1065	4	ISM	ENSG00000131381.12	ENST00000441057.5	1352	9	-16	10936	-1	0	5prime_fragment	FALSE	canonical	3	46	junction_2	23.1132477644796	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTGGCTTGACTGTTCTTTA	-15096855	True	NA	NA	False	AGTAAA	-15	NA	15099149	15095670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_15096289_15096534_15096711_15098118_15098275_15099034
transcript_97516.known	chr3	-	582	3	FSM	ENSG00000131381.12	ENST00000507357.1	582	3	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_2	46.5	48	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CGTGATGTCAAAGGGCAAAT	-15096842	True	NA	NA	False	NA	NA	NA	15099136	15095997	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15096289_15096534_15096711_15099021
transcript_97520.known	chr3	+	4348	21	FSM	ENSG00000131375.10	ENST00000253693.7	4348	21	0	0	0	0	multi-exon	TRUE	canonical	3	54	junction_15	27.8701901679913	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTATTTGTACTTCTTACAAT	15204209	True	NA	NA	False	AATAAA	-13	NA	15206245	15252916	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15206598_15212103_15212213_15217424_15217583_15218472_15218541_15220780_15220982_15223474_15223562_15227838_15227966_15228973_15229060_15230441_15230536_15232518_15232666_15233866_15233974_15235024_15235146_15240472_15240618_15240753_15240854_15241452_15241589_15242177_15242254_15245525_15245672_15246731_15246795_15247326_15247458_15250930_15251024_15251115
transcript_97524.known	chr3	-	4020	7	FSM	ENSG00000206562.12	ENST00000443029.5	4020	7	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_1	85.8286406484197	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCCCTTGTCTCTTGACTTAT	-15424917	True	NA	1	True	AATAAA	-21	NA	15427518	15381274	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15384188_15411244_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_97529.nic	chr3	-	1140	7	NIC	ENSG00000206562.12	novel	2618	6	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	25	junction_2	76.6523537364205	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGTTTTCCTTCAGAGCAAA	-15424955	True	NA	-17	True	AATAAA	-23	NA	15427556	15411335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_15411438_15414020_15414163_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_97535.known	chr3	+	4447	6	FSM	ENSG00000144597.14	ENST00000396842.7	4447	6	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_4	3.49857113690718	58	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTTCTTGTCTTGGTGGGTTT	15425410	True	NA	10	True	AATAAA	-20	NA	15427597	15442613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15427883_15429912_15430008_15432086_15432224_15434347_15434539_15436341_15436576_15439108
transcript_97537.known	chr3	-	2618	6	FSM	ENSG00000206562.12	ENST00000383790.8	2618	6	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_2	66.5023307862213	265	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCCATGGCTCCATATCTGAT	-15424943	True	NA	NA	False	NA	NA	NA	15427544	15409759	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_9754.known	chr1	+	494	3	FSM	ENSG00000274372.5	ENST00000614663.4	494	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	2	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAACCTTTGGTATCTTTCTA	148021829	False	NA	4	True	AATAAA	-20	NA	148021849	148025931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148021999_148024529_148024720_148025776
transcript_97541.nic	chr3	-	1173	6	NIC	ENSG00000206562.12	novel	615	4	NA	NA	-12	0	combination_of_known_junctions	FALSE	canonical	3	106	junction_1	53.2743840884153	328	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGCCTTGAGATTACTTTCC	-15424955	True	NA	-37	True	AATAAA	-18	NA	15427556	15413668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_15413946_15415497_15415584_15415771_15415943_15424954_15425090_15426286_15426636_15427401
transcript_97549.known	chr3	-	1221	5	FSM	ENSG00000206562.12	ENST00000450816.6	1221	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_3	75.1215681412469	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGAGGCTGAGGCAAGAGAA	-15424939	True	NA	NA	False	NA	NA	NA	15427540	15411017	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15411438_15414020_15414163_15415771_15415943_15426286_15426636_15427401
transcript_9755.known	chr1	-	164	1	FSM	ENSG00000206585.1	ENST00000383858.1	164	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	29	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AATTTTTGTAATGAAAAAAT	-148038835	True	NA	NA	False	NA	NA	NA	148038916	148038752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148038800_148038900
transcript_97562.known	chr3	+	2264	5	FSM	ENSG00000169814.16	ENST00000303498.10	2264	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	35.2455670971542	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGCCACATCTTCCTCTAACA	15599618	True	NA	-69	True	NA	NA	NA	15601735	15645729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15632590_15632867_15635423_15635689_15641907_15642058_15644315
transcript_97565.known	chr3	+	2069	4	FSM	ENSG00000169814.16	ENST00000672065.1	2069	4	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	22.2910046630673	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AAAGCAGTGGCTTGGGGTTT	15599627	True	NA	21	True	AATAAA	-27	NA	15601744	15645819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15635423_15635689_15641907_15642058_15644315
transcript_97568.known	chr3	+	1112	4	FSM	ENSG00000169814.16	ENST00000436193.5	1112	4	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	33.5360502544153	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGATGAACCAGCTCCCACTC	15599851	False	NA	NA	False	NA	NA	NA	15601968	15644670	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15602311_15635423_15635689_15641907_15642058_15644315
transcript_97569.known	chr3	+	760	3	FSM	ENSG00000169814.16	ENST00000417015.3	760	3	0	0	0	0	multi-exon	FALSE	canonical	1	64	junction_2	27	686	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTATGGATCTTTCCATTTA	15599627	True	NA	31	True	ATTAAA	-31	NA	15601744	15642252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15635423_15635689_15641907
transcript_97571.known	chr3	+	459	2	FSM	ENSG00000169814.16	ENST00000480711.1	459	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAAGAAATGATTTGAGTTC	15599630	True	NA	NA	False	NA	NA	NA	15601747	15606752	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15601895_15606440
transcript_97572.known	chr3	+	644	2	FSM	ENSG00000169814.16	ENST00000642517.1	644	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGATTTATGCACCGACCCTT	15602034	False	NA	NA	False	CATAAA	-19	NA	15602137	15606911	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_15602311_15606440
transcript_97573.known	chr3	-	2009	17	FSM	ENSG00000131373.15	ENST00000321169.10	2009	17	0	0	0	0	multi-exon	FALSE	canonical	3	232	junction_12	21.5547993495648	800	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GTAACAGAAAAAGTTATTCT	-15596573	True	NA	NA	False	ATTAAA	-21	NA	15601569	15560698	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_97574.known	chr3	-	1734	14	FSM	ENSG00000131373.15	ENST00000451445.6	1734	14	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_10	72.9926639744217	226	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	-15596591	True	NA	71	True	AATAAA	-18	NA	15601587	15560745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_97575.known	chr3	-	1880	16	FSM	ENSG00000131373.15	ENST00000456194.6	1880	16	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_13	62.5223871016525	163	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ACATTTTACAGTAAAGGAAT	-15596573	True	NA	70	True	AATAAA	-17	NA	15601569	15560746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15574976_15575083_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15589539_15589613_15596383_15596425_15601089_15601195_15601382
transcript_97576.known	chr3	-	1771	15	FSM	ENSG00000131373.15	ENST00000383779.8	1771	15	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_11	95.5954486150798	193	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CATTTTACAGTAAAGGAATT	-15596561	True	NA	71	True	AATAAA	-18	NA	15601557	15560745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_15560898_15563357_15563545_15564550_15564659_15567843_15568003_15568431_15568587_15571667_15571770_15573158_15573243_15579909_15580046_15582876_15582990_15585247_15585343_15586524_15586603_15591599_15591681_15596383_15596425_15601089_15601195_15601382
transcript_97579.known	chr3	-	1178	3	FSM	ENSG00000154813.10	ENST00000285082.8	1178	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_2	221	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTTGTTTGTGTTTTGATA	-16258165	False	NA	NA	False	NA	NA	NA	16264777	16259909	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264154_16264230_16264594
transcript_97581.known	chr3	-	3052	2	FSM	ENSG00000154813.10	ENST00000383775.4	3052	2	0	0	0	0	multi-exon	FALSE	canonical	3	282	junction_1	0	1643	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGCTTTTATGTAGTTTT	-16258357	True	NA	0	True	AATAAA	-40	NA	16264969	16257978	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264768
transcript_97582.known	chr3	-	4019	3	FSM	ENSG00000154813.10	ENST00000488423.2	4019	3	0	0	0	0	multi-exon	FALSE	canonical	3	439	junction_2	2	1178	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCTGGCGCCTGGGGAGTTC	-16258331	True	NA	1	True	AATAAA	-19	NA	16264943	16257060	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264154_16264230_16264768
transcript_97583.known	chr3	-	738	3	FSM	ENSG00000154813.10	ENST00000462982.1	738	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	221.5	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGTCATTAGGATTTCTTAAT	-16257975	False	NA	-41	True	NA	NA	NA	16264587	16260423	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16260830_16264154_16264230_16264330
transcript_97587.known	chr3	+	1994	10	FSM	ENSG00000154814.14	ENST00000442255.5	1994	10	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_4	62.7808258847033	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATACAATCTTAATAATTT	16263071	True	NA	NA	False	AATGAA	-11	NA	16265206	16303983	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16272144_16272322_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_97594.known	chr3	+	1643	10	FSM	ENSG00000154814.14	ENST00000435829.6	1643	10	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_9	59.9650103738489	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGATTTTAACTCACTAAGCT	16263074	True	NA	NA	False	NA	NA	NA	16265209	16337315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_16265506_16269125_16269276_16270928_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407_16303593_16337111
transcript_97597.known	chr3	+	3916	9	FSM	ENSG00000154814.14	ENST00000285083.10	3916	9	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_2	19.4867743610891	407	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTCTGGCTCTATGAGTTT	16263076	True	NA	3	True	ATTAAA	-16	NA	16265211	16306087	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_16265506_16269125_16269276_16270944_16271072_16271658_16271723_16286341_16286449_16294855_16294998_16301625_16301869_16302639_16302749_16303407
transcript_97613.known	chr3	-	2974	11	FSM	ENSG00000092345.14	ENST00000399444.7	2974	11	0	0	0	0	multi-exon	TRUE	canonical	2	4	junction_10	4.41021541423999	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGTTTTTAGCATTCTGATG	-16605383	True	NA	-3	True	AATAAA	-23	NA	16605423	16586791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16588714_16592049_16592149_16593654_16593769_16594532_16594584_16595313_16595386_16596749_16596890_16596987_16597052_16597489_16597542_16598086_16598179_16598451_16598599_16605202
transcript_97615.nnic	chr3	+	1582	4	Antisense	novelGene_ENSG00000092345.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	1	junction_3	3.68178700572909	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTATGTATTTGTCTT	16611289	True	NA	NA	False	ATTAAA	-15	NA	16611513	16638804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_+_16611679_16622798_16622981_16631609_16631682_16637641
transcript_97619.nnic	chr3	-	1260	3	NNC	ENSG00000229271.2	novel	1001	2	NA	NA	27111	6457	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	6	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTATGGTATTTTGT	-16670054	True	NA	-1	True	AATAAA	-19	NA	16670368	16641295	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_16641426_16647573_16648613_16670277
transcript_97620.nnic	chr3	-	1036	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27111	85	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	122	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCCTATTAGTTCTGTCCC	-16670054	True	NA	-6	True	AATAAA	-34	NA	16670368	16647667	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_16648613_16670277
transcript_97621.nnic	chr3	-	936	2	NIC	ENSG00000229271.2	novel	1001	2	NA	NA	27111	-15	combination_of_known_splicesites	FALSE	canonical	2	13	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GCCTGAACAACATAACTTCT	-16670054	True	NA	-13	True	AATAAA	-19	NA	16670368	16647767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_16648613_16670277
transcript_97624.known	chr3	-	411	3	FSM	ENSG00000229271.2	ENST00000426218.1	411	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTGATGAGTTGTT	-16697140	False	NA	-9	True	AATAAA	-24	NA	16697479	16687985	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_16688212_16692288_16692373_16697378
transcript_97627.nnic	chr3	+	416	2	Intergenic	novelGene_38	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	16	junction_1	0	239	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCGGAAGAAGCGGCCGAGGC	16884199	False	NA	NA	False	ATTAAA	-12	NA	16884212	16884913	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_+_16884537_16884821
transcript_9763.nnic	chr1	-	897	4	NNC	ENSG00000227733.11	novel	573	4	NA	NA	42	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	2.49443825784929	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTCTCCTCTTGTGTGTTGTG	-148246284	False	NA	NA	False	ATTAAA	-15	NA	148246421	148207842	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_148207885_148208532_148208655_148216936_148217131_148245882
transcript_97631.known	chr3	-	623	7	FSM	ENSG00000131374.14	ENST00000445294.5	623	7	0	0	0	0	multi-exon	TRUE	canonical	3	36	junction_5	13.0341431973448	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGTTGGCCAACAAGATTTG	-17739538	True	NA	NA	False	NA	NA	NA	17742615	17404746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_17404769_17404871_17404962_17406417_17406527_17428449_17428520_17508473_17508606_17623848_17623914_17742480
transcript_97632.known	chr3	+	465	2	FSM	ENSG00000286352.1	ENST00000665745.1	465	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTAAGTTTTGCTATAGTTTA	17742937	True	NA	NA	False	AATAAA	-22	NA	17742951	17745665	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_17743119_17745367
transcript_9764.known	chr1	-	1572	4	FSM	ENSG00000227733.11	ENST00000629702.3	1572	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	2.44948974278318	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTCTTGTGTGTTGTGCTTT	NA	False	NA	NA	False	ATTAAA	-19	NA	148247108	148207838	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148208655_148216936_148217131_148227987_148228070_148246628
transcript_97640.known	chr3	+	1131	5	FSM	ENSG00000228956.9	ENST00000598149.6	1131	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	6.06217782649107	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCACTTCCTATTTATTGTTT	18445226	True	NA	NA	False	AATAAA	-19	NA	18445236	18469714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_18445443_18463479_18463546_18464286_18464340_18465962_18466040_18468985
transcript_97647.nic	chr3	+	1076	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50094	-277	-9714	-80	3prime_fragment	FALSE	canonical	1	3	junction_1	10.9645894689324	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACTGGTTTTCAGCCATCAC	18515877	True	NA	NA	False	AATAAA	-37	NA	18516076	18530647	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
transcript_97648.nic	chr3	+	1683	4	ISM	ENSG00000228956.9	ENST00000628963.2	888	5	50094	-884	-9714	527	3prime_fragment	FALSE	canonical	1	3	junction_1	10.9645894689324	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCAGTCTCACGTATTTCTT	18515877	True	NA	NA	False	ATTAAA	-21	NA	18516076	18531254	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_18516179_18526386_18526541_18527173_18527327_18529980
transcript_97653.nnic	chr3	+	1045	4	NIC	ENSG00000228956.9	novel	638	9	NA	NA	-253	240	combination_of_known_splicesites	FALSE	canonical	0	0	junction_2	2.94392028877595	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATAAATTCATTTGAT	NA	False	NA	NA	False	TATAAA	-23	NA	18693633	18764299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_18693954_18695567_18695629_18745953_18746071_18763752
transcript_97655.nnic	chr3	+	807	4	NIC	ENSG00000228956.9	novel	638	9	NA	NA	0	240	combination_of_known_splicesites	FALSE	canonical	0	0	junction_1	3.29983164553722	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATAAATTCATTTGAT	18693781	True	NA	NA	False	TATAAA	-23	NA	18693886	18764299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_18693954_18697899_18697976_18745953_18746071_18763752
transcript_97658.nnic	chr3	+	793	3	NIC	ENSG00000228956.9	novel	638	9	NA	NA	-62	240	combination_of_known_splicesites	FALSE	canonical	2	4	junction_1	1.5	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTTTATAAATTCATTTGAT	18693719	True	NA	NA	False	TATAAA	-23	NA	18693824	18764299	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_18693954_18745953_18746071_18763752
transcript_97660.nnic	chr3	-	333	2	Intergenic	novelGene_39	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTAGTCTTATATTTCTTC	-18963757	False	NA	NA	False	AATAAA	-29	NA	18963833	18949173	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_18949409_18963735
transcript_97662.known	chr3	-	2860	13	FSM	ENSG00000163576.18	ENST00000295824.14	2860	13	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	2.05986784905138	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTATTGTTTTCCATAAAGC	-19934124	True	NA	NA	False	AATAAA	-21	NA	19934217	19879471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_19879805_19882549_19882732_19884402_19884616_19888443_19888652_19896686_19896842_19898777_19898846_19899431_19899516_19905619_19905750_19915302_19915414_19918231_19918413_19919832_19919977_19920504_19920568_19933229
transcript_97664.nnic	chr3	+	2405	7	NNC	ENSG00000144566.11	novel	2518	6	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	non_canonical	1	3	junction_1	349.665395612561	66	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	NA	False	NA	15	True	AATAAA	-17	NA	19947056	19985175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_19947264_19947416_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_97668.known	chr3	+	2518	6	FSM	ENSG00000144566.11	ENST00000273047.9	2518	6	0	0	0	0	multi-exon	FALSE	canonical	3	835	junction_4	58.6153563496802	667	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCGGCTTTTCTCTTTTC	19931592	True	NA	15	True	AATAAA	-17	NA	19947096	19985175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_19947522_19950805_19951062_19975600_19975753_19976046_19976170_19978309_19978404_19983707
transcript_97669.known	chr3	-	1969	9	FSM	ENSG00000129810.15	ENST00000421451.5	1969	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	76.2822677625672	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	-20179665	True	NA	NA	False	AATAGA	-23	NA	20186127	20161008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_97670.known	chr3	-	2338	9	FSM	ENSG00000129810.15	ENST00000263753.8	2338	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	77.4966733156979	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	-20179729	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_97672.known	chr3	-	1582	9	FSM	ENSG00000129810.15	ENST00000419233.6	1582	9	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	88.5140349040761	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATGGCCTGTTATGGCCCTG	-20179729	True	NA	NA	False	AATAAA	-44	NA	20186191	20160592	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_97673.known	chr3	-	1162	8	FSM	ENSG00000129810.15	ENST00000452020.5	1162	8	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	92.1325575638998	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGAGATGGAGGGGTGTTGAC	-20179665	True	NA	NA	False	AATAGA	-23	NA	20186127	20161008	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20161227_20170723_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_97674.known	chr3	-	3070	8	FSM	ENSG00000129810.15	ENST00000412997.6	3070	8	0	0	0	0	multi-exon	FALSE	canonical	3	139	junction_3	45.4182378184206	91	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGATTGCTTTCCTTCTATT	-20179744	True	NA	-3	True	AATAAA	-15	NA	20186206	20169483	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20174248_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_97676.known	chr3	-	1075	8	FSM	ENSG00000129810.15	ENST00000417364.1	1075	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	70.7161615912804	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	ATCTGTAAGAGTACACAAAC	-20179665	True	NA	NA	False	TTTAAA	-37	NA	20186127	20170643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_97677.known	chr3	-	1187	8	FSM	ENSG00000129810.15	ENST00000437051.5	1187	8	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	72.4557570845401	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	-20179729	True	NA	-15	True	AATAAA	-33	NA	20186191	20170484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20175004_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_9768.nnic	chr1	+	383	2	Antisense	novelGene_ENSG00000227733.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	45	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTCATGTCTAACTGTAATT	148201112	True	NA	NA	False	AATAAA	-29	NA	148201300	148203082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_148201489_148202887
transcript_97694.known	chr3	-	2266	7	FSM	ENSG00000129810.15	ENST00000442720.5	2266	7	0	0	0	0	multi-exon	FALSE	canonical	3	51	junction_2	71.5471872263334	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTGCTTTCCTTCTATTCTT	-20179744	True	NA	0	True	AATAAA	-18	NA	20186206	20169480	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_97699.nic	chr3	-	1241	7	ISM	ENSG00000129810.15	ENST00000306698.6	1531	8	-105	9892	-90	0	5prime_fragment	FALSE	canonical	3	51	junction_2	73.8782782690555	39	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGAGCTTAAGCATTATCAT	-20179834	True	NA	-15	True	AATAAA	-33	NA	20186296	20170484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20170816_20171042_20171233_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_9770.nnic	chr1	+	676	2	Antisense	novelGene_ENSG00000227733.11_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	70	junction_1	0	289	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTATCCAGCCTCAGGTAT	148201112	True	NA	NA	False	ATTAAA	-16	NA	148201300	148203375	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_+_148201489_148202887
transcript_97714.nic	chr3	-	1233	6	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-172	4013	-93	65	5prime_fragment	FALSE	canonical	3	139	junction_1	48.054136138318	118	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAGAAAAGAAAAGCT	-20179837	True	NA	18	True	ACTAAA	-32	NA	20186299	20174656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20185947
transcript_97715.nic	chr3	-	1119	6	ISM	ENSG00000129810.15	ENST00000437051.5	1187	8	-105	4172	-90	65	5prime_fragment	FALSE	canonical	3	122	junction_5	52.6444678954969	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	GAGAAGAGAAAAGAAAAGCT	-20179834	True	NA	18	True	ACTAAA	-32	NA	20186296	20174656	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20175056_20176600_20176660_20178270_20178348_20183607_20183805_20183885_20184035_20186058
transcript_97727.nic	chr3	-	435	2	ISM	ENSG00000129810.15	ENST00000417364.1	1075	8	-172	13308	-93	-9230	5prime_fragment	FALSE	canonical	3	140	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGAATAAAAACTTGGCAGAG	-20179837	True	NA	NA	False	CATAAA	-21	NA	20186299	20183951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_20184035_20185947
transcript_97733.known	chr3	+	705	3	FSM	ENSG00000225542.2	ENST00000412369.1	705	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	0.5	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAGGTCATATTCTGATGTA	21542561	True	NA	NA	False	NA	NA	NA	21542815	21579959	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_21542996_21579188_21579382_21579627
transcript_97737.known	chr3	+	985	1	FSM	ENSG00000132967.9	ENST00000451497.1	985	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	6749	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCTCTTGGGAACGTAGAAGA	22381860	False	NA	7	True	ATTAAA	-13	NA	22381944	22382929	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_22381900_22382900
transcript_97741.known	chr3	+	1248	6	FSM	ENSG00000182247.10	ENST00000425792.5	1248	6	0	0	0	0	multi-exon	FALSE	canonical	3	668	junction_5	58.1377674149945	85	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTCTTTTATGTGATCTTT	23194014	True	NA	NA	False	NA	NA	NA	23203019	23590222	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23203263_23208691_23208876_23217261_23217313_23499607_23499741_23532553_23532702_23589733
transcript_9775.nnic	chr1	-	1129	5	NNC	ENSG00000274020.4	novel	1395	7	NA	NA	-6750	0	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_4	1.87082869338697	6	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTTTATTATTTATT	NA	False	NA	NA	False	ATTAAA	-17	NA	148304021	148290888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_148291302_148295749_148295914_148296123_148296183_148296272_148296500_148303755
transcript_97752.known	chr3	+	1783	6	FSM	ENSG00000170142.12	ENST00000306627.8	1783	6	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	38.7432574779148	648	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTGGCAGTACATGTCCTG	23793854	True	NA	NA	False	GATAAA	-24	NA	23805954	23891640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23806089_23807236_23807422_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_9776.known	chr1	-	1108	5	FSM	ENSG00000274020.4	ENST00000652758.1	1108	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.11803398874989	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTTGGTTTATTATTTATT	-148334921	True	NA	NA	False	ATTAAA	-17	NA	148334975	148290888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148291305_148295749_148295914_148296123_148296183_148296272_148296500_148334733
transcript_97775.known	chr3	+	1398	5	FSM	ENSG00000170142.12	ENST00000346855.7	1398	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	62.8306254942604	368	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGCTGTGTTCATTTACTTT	23793864	True	NA	24	True	AATAAA	-27	NA	23805964	23891316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23806089_23807236_23807422_23887566_23887700_23889111_23889260_23890508
transcript_97778.known	chr3	+	1224	5	FSM	ENSG00000170142.12	ENST00000424381.5	1224	5	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_1	50.8152290165065	646	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGCTGTGTTCATTTACT	23807508	True	NA	22	True	AATAAA	-25	NA	23810442	23891314	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23810529_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_97782.known	chr3	+	1138	5	FSM	ENSG00000170142.12	ENST00000475680.5	1138	5	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	62.9101541883343	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CCATATAAGAGATGAGTAGT	23810705	True	NA	NA	False	TATAAA	-23	NA	23810794	23891089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23811020_23811459_23811511_23887566_23887700_23889111_23889260_23890508
transcript_97792.known	chr3	-	1605	5	FSM	ENSG00000197885.11	ENST00000412028.5	1605	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	42.4168303860626	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ACAATAAAAGTATCAAAAAT	-23915436	True	NA	-30	True	NA	NA	NA	23916963	23892306	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911447_23916860
transcript_97793.known	chr3	-	1644	5	FSM	ENSG00000197885.11	ENST00000415901.6	1644	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	37.0438928839829	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TATACAATAAAAGTATCAAA	-23915397	True	NA	-33	True	NA	NA	NA	23916924	23892309	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893334_23900803_23901050_23910810_23910922_23911328_23911451_23916783
transcript_9781.nnic	chr1	-	1326	4	NIC	ENSG00000274020.4	novel	1050	3	NA	NA	47	0	intron_retention	FALSE	canonical	0	0	junction_3	1.4142135623731	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	NA	False	NA	-1	True	AATAAA	-16	NA	148459912	148432958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_148433644_148435145_148435355_148436443_148436565_148459601
transcript_97811.known	chr3	+	588	4	FSM	ENSG00000174748.22	ENST00000422218.5	588	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11400.9929489594	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TCATTGATCCATTCCATAAA	NA	False	NA	NA	False	NA	NA	NA	23916590	23919286	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23916769_23917849_23918032_23918439_23918577_23919195
transcript_97812.known	chr3	+	605	4	FSM	ENSG00000174748.22	ENST00000436146.2	605	4	0	0	0	0	multi-exon	FALSE	canonical	3	234	junction_1	11290.7333784047	5453	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917174_23917946_23918032_23918439_23918577_23919195
transcript_97821.known	chr3	+	564	4	FSM	ENSG00000174748.22	ENST00000644684.1	564	4	0	0	0	0	multi-exon	FALSE	canonical	2	323	junction_1	11248.7972986745	571	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTAGGACAGTCATGTCT	23669546	True	NA	13	True	AATAAA	-2	NA	23917147	23919537	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917174_23917972_23918032_23918439_23918577_23919195
transcript_97826.known	chr3	+	571	4	FSM	ENSG00000174748.22	ENST00000643707.1	571	4	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	11376.0195440526	65	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ATAAAGCTATCAGAAGAAAT	23669697	False	NA	NA	False	NA	NA	NA	23917298	23919301	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917445_23917849_23918032_23918439_23918577_23919195
transcript_97838.known	chr3	+	786	2	FSM	ENSG00000170142.12	ENST00000484048.1	786	2	0	0	0	0	multi-exon	FALSE	canonical	3	59	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAACTCATATTAGCAGGTA	23793854	True	NA	NA	False	AATAGA	-30	NA	23805954	23807888	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23806089_23807236
transcript_97840.known	chr3	-	778	2	FSM	ENSG00000223791.1	ENST00000426702.1	778	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	24	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGGACAGTAGGTGAATTTT	-23806873	True	NA	NA	False	AATAAA	-23	NA	23806905	23804023	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23804715_23806818
transcript_97843.known	chr3	-	795	4	FSM	ENSG00000197885.11	ENST00000416026.2	795	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	35.9103822808329	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATAGTGATTGCCTTTAAGTG	-23915425	True	NA	NA	False	ACTAAA	-30	NA	23916952	23893064	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_23893338_23900807_23901050_23910810_23910922_23916783
transcript_97844.known	chr3	+	824	4	FSM	ENSG00000174748.22	ENST00000644185.1	824	4	0	0	0	0	multi-exon	FALSE	canonical	3	1341	junction_1	10769.1344230733	17982	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917296_23917849_23918032_23918439_23918577_23919195
transcript_97845.known	chr3	+	1785	2	FSM	ENSG00000174748.22	ENST00000490223.1	1785	2	0	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_1	0	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23669546	True	NA	27	True	AATAAA	-16	NA	23917147	23919551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23918577_23919195
transcript_97846.known	chr3	+	820	3	FSM	ENSG00000174748.22	ENST00000354811.5	820	3	0	0	0	0	multi-exon	FALSE	canonical	3	23760	junction_2	414.5	7095	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCTGCTTACAGGTGTTA	23917449	False	NA	27	True	AATAAA	-16	NA	23917704	23919551	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23918032_23918439_23918577_23919195
transcript_97847.known	chr3	+	1729	2	FSM	ENSG00000174748.22	ENST00000465786.1	1729	2	0	0	0	0	multi-exon	FALSE	canonical	3	12303	junction_1	0	136	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTCTGCTTACAGGTGTTAT	23669546	True	NA	28	True	AATAAA	-17	NA	23917147	23919552	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_23917174_23917849
transcript_97853.known	chr3	-	568	5	FSM	ENSG00000151090.20	ENST00000431815.5	568	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	5.67890834580027	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGGGTATCACTACCGCTGT	-24494414	True	NA	NA	False	NA	NA	NA	24494797	24152430	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_24152491_24190073_24190335_24228937_24229002_24337299_24337372_24494686
transcript_97856.nic	chr3	-	820	2	ISM	ENSG00000151090.20	ENST00000428492.5	539	5	-92	146575	-13	-107769	5prime_fragment	FALSE	canonical	0	0	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAGCATGAGAATTAGA	-24494480	True	NA	NA	False	NA	NA	NA	24494863	24336728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_24337372_24494686
transcript_97857.known	chr3	-	2534	12	FSM	ENSG00000151092.18	ENST00000280700.10	2534	12	0	0	0	0	multi-exon	FALSE	canonical	3	264	junction_8	18.3370644838343	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATCTTTTTAGTGGTTATTT	-25779333	True	NA	-1	True	AATAAA	-19	NA	25783443	25718943	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_97858.known	chr3	-	2086	12	FSM	ENSG00000151092.18	ENST00000308710.9	2086	12	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_6	107.429854108246	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCTTTCTTCCATATGTGAC	-25779271	True	NA	-23	True	AATAAA	-14	NA	25783381	25719275	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25720013_25720192_25729132_25729319_25732318_25732484_25733871_25733983_25736308_25736401_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_9786.nnic	chr1	-	1133	3	NIC	ENSG00000274020.4	novel	1050	3	NA	NA	-3	0	intron_retention	FALSE	canonical	1	2	junction_2	0.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	NA	False	NA	-1	True	AATAAA	-16	NA	148459962	148432958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_-_148433644_148435145_148435233_148459601
transcript_97861.known	chr3	-	2024	11	FSM	ENSG00000151092.18	ENST00000396649.7	2024	11	0	0	0	0	multi-exon	FALSE	canonical	3	39	junction_1	79.6557593649072	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCTTCCATATGTGACTATAA	-25779328	True	NA	-18	True	AATAAA	-19	NA	25783438	25719270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_25719636_25729132_25729319_25732318_25732484_25733871_25733983_25736003_25736150_25737333_25737456_25739576_25739800_25751097_25751264_25764065_25764312_25778573_25778689_25783259
transcript_97873.known	chr3	+	409	1	FSM	ENSG00000213872.3	ENST00000458542.1	409	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	20	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACAGCTCATGTGCATGTTTT	NA	False	NA	NA	False	AAGAAA	-9	NA	25749487	25749896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25749500_25749900
transcript_97874.known	chr3	+	1506	3	FSM	ENSG00000151093.8	ENST00000280701.8	1506	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	3.5	104	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CTATATGTGAAGAAATTATG	25789867	True	NA	NA	False	ATTAAA	-17	NA	25790089	25794531	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25790148_25790989_25791998_25794091
transcript_97875.known	chr3	+	1044	4	FSM	ENSG00000151093.8	ENST00000448177.1	1044	4	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	10.5303793326209	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAAATGCTATATGTGAAG	25789867	True	NA	NA	False	ATTAAA	-9	NA	25790089	25794523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_25790148_25790989_25791316_25791769_25791998_25794091
transcript_97877.known	chr3	+	1695	3	FSM	ENSG00000179796.12	ENST00000417744.5	1695	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	26624635	True	NA	13	True	AATAAA	-25	NA	26624666	26710776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26624770_26625183_26625512_26709512
transcript_97878.known	chr3	+	1696	2	FSM	ENSG00000179796.12	ENST00000396641.6	1696	2	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAGAGTGACTTATTGGTCAA	26622593	True	NA	13	True	AATAAA	-25	NA	26622805	26710776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26623238_26709512
transcript_97879.known	chr3	+	927	2	FSM	ENSG00000179796.12	ENST00000432040.1	927	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CATGAGACAGCCCACAACGT	26624059	True	NA	NA	False	NA	NA	NA	26624080	26710161	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_26624359_26709512
transcript_9788.known	chr1	-	1050	3	FSM	ENSG00000274020.4	ENST00000613452.1	1050	3	0	0	0	0	multi-exon	TRUE	canonical	2	3	junction_1	6.5	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCAGCGGCTTATCCTTGAAT	-148459545	False	NA	-1	True	AATAAA	-16	NA	148459757	148432958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148433644_148435145_148435355_148459601
transcript_97882.known	chr3	-	3264	6	FSM	ENSG00000163508.13	ENST00000449599.4	3264	6	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	1.09544511501033	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGACATAGCTCTGTCTTCT	-27722303	True	NA	-7	True	AATAAA	-19	NA	27722323	27715952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_27717809_27718586_27718649_27718734_27718894_27719359_27719482_27720170_27720326_27721413
transcript_97887.known	chr3	+	332	3	FSM	ENSG00000225548.7	ENST00000455984.1	332	3	0	0	0	0	multi-exon	TRUE	canonical	3	75	junction_2	1.5	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACAGCCTGGATTCAAGTCA	27821430	False	NA	NA	False	NA	NA	NA	27821597	27860192	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_27821725_27824649_27824749_27860086
transcript_97904.nnic	chr3	-	764	3	NNC	ENSG00000235493.2	novel	781	3	NA	NA	-457	-59904	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	4.5	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTGTTGTGTTAATG	NA	False	NA	NA	False	AATAAA	-30	NA	28059725	28057447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_28057874_28059241_28059357_28059502
transcript_97908.nnic	chr3	-	883	2	NNC	ENSG00000235493.2	novel	781	3	NA	NA	-430	-59904	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	0	18	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGTCCTGTTGTGTTAATG	-28059240	True	NA	NA	False	AATAAA	-30	NA	28059698	28057447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_28057874_28059241
transcript_97911.nnic	chr3	-	1024	2	ISM	ENSG00000163512.14	ENST00000420543.6	1366	7	-38	8396	-38	-1541	5prime_fragment	FALSE	canonical	3	178	junction_1	0	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATATACCAACAAAGGAAAT	NA	False	NA	NA	False	NA	NA	NA	28349088	28340086	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_28340623_28348600
transcript_97913.known	chr3	+	3357	10	FSM	ENSG00000206559.8	ENST00000383768.7	3357	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	3.61410132606458	9	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCACAAGCAACATTATGATC	28348691	True	NA	NA	False	TATAAA	-19	NA	28348720	28526358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28349204_28390497_28390618_28413055_28413401_28435109_28435270_28478813_28478932_28492126_28492174_28514063_28514123_28515553_28515622_28520991_28521117_28524526
transcript_97922.known	chr3	-	4403	8	FSM	ENSG00000163512.14	ENST00000479665.6	4403	8	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_2	37.9881829101673	135	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTGTGGAACTTGAATTGATT	-28348078	True	NA	-17	True	AATAAA	-39	NA	28348824	28321046	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_97941.known	chr3	-	1485	7	FSM	ENSG00000163512.14	ENST00000463512.5	1485	7	0	0	0	0	multi-exon	FALSE	canonical	3	93	junction_1	32.9110754745099	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACACCAAAAGCAAATTTTC	-28348928	False	NA	NA	False	NA	NA	NA	28348972	28326489	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_97945.known	chr3	-	943	7	FSM	ENSG00000163512.14	ENST00000334100.10	943	7	0	0	0	0	multi-exon	FALSE	canonical	3	72	junction_1	40.1524871237414	274	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCATTGTTTTATCATTTGG	-28348585	False	21	-14	True	AATAAA	-16	NA	28348629	28331688	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28331951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_97949.known	chr3	-	1366	7	FSM	ENSG00000163512.14	ENST00000420543.6	1366	7	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_1	50.4405590769968	252	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACTTCATTGTTTTATCATTT	NA	False	NA	-16	True	AATAAA	-14	NA	28349050	28331690	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28331955_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340623_28348600
transcript_97971.known	chr3	+	670	5	FSM	ENSG00000187118.14	ENST00000418849.2	670	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_1	395.370079798662	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237583	True	NA	19	True	AATAAA	-15	NA	28241623	28319773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28253730_28253766_28263290_28263381_28316332_28316424_28319508
transcript_9798.nnic	chr1	+	1096	4	NNC	ENSG00000231551.8	novel	1082	4	NA	NA	-37	-14	at_least_one_novel_splicesite	TRUE	canonical	1	8	junction_3	4.02768199119819	16	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTTGAAGCCAATAGTATGG	NA	False	NA	NA	False	AATAAA	-15	NA	148402478	148425205	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_148402666_148420371_148420608_148424062_148424157_148424626
transcript_97986.known	chr3	+	6009	4	FSM	ENSG00000187118.14	ENST00000466830.6	6009	4	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	143.206920999728	2731	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	CAGCCAAAAAAAAAAAGTTT	28237578	True	NA	NA	False	AGTAAA	-15	NA	28241618	28325142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28263290_28263381_28316332_28316424_28319508
transcript_97990.known	chr3	+	724	4	FSM	ENSG00000187118.14	ENST00000334841.10	724	4	0	0	0	0	multi-exon	FALSE	canonical	2	30	junction_1	387.893742609436	234	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTGGTTTCTTAAATGGG	28237583	True	NA	19	True	AATAAA	-15	NA	28241623	28319773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241902_28263290_28263381_28316332_28316424_28319508
transcript_97996.known	chr3	+	549	3	FSM	ENSG00000187118.14	ENST00000423894.5	549	3	0	0	0	0	multi-exon	FALSE	canonical	3	355	junction_1	301	1300	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAGTTTTGGTTTCTTAAATG	28237577	True	NA	17	True	AATAAA	-13	NA	28241617	28319771	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28316332_28316424_28319508
transcript_98004.known	chr3	+	3749	3	FSM	ENSG00000187118.14	ENST00000477739.1	3749	3	0	0	0	0	multi-exon	FALSE	canonical	3	636	junction_1	19	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTATTTCAAAGTTTTGGTT	28237543	True	NA	8	True	AATAAA	-4	NA	28241583	28319762	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28241813_28263290_28263381_28316332
transcript_98005.known	chr3	-	3127	9	FSM	ENSG00000163512.14	ENST00000295748.7	3127	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	71.1941667203149	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGATGTGAAATATTGTCCT	-28348746	False	NA	-3	True	AATAAA	-22	NA	28348790	28322352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_28324455_28326831_28326951_28332368_28332428_28336736_28336886_28337936_28338037_28338492_28338616_28340401_28340602_28341511_28341597_28348600
transcript_98006.known	chr3	+	446	3	FSM	ENSG00000187118.14	ENST00000482499.1	446	3	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_1	2	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTGGTTTCTTAAATGGGAAA	NA	False	NA	22	True	AATAAA	-18	NA	28316352	28319776	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28316424_28316752_28316860_28319508
transcript_9801.known	chr1	+	165	1	FSM	ENSG00000274210.1	ENST00000622285.1	165	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	5	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCGCTTTTGTGGTGCGAATA	148519189	True	NA	NA	False	GGGGCT	-20	NA	148522600	148522765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148522600_148522800
transcript_98016.known	chr3	+	2144	5	FSM	ENSG00000144642.22	ENST00000432518.6	2144	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7.98044484975618	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTCTCTGTCAATTTCCTGC	NA	False	NA	NA	False	AATAAA	-26	NA	28574790	28758340	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28575376_28576272_28576497_28756757_28756969_28757108_28757242_28757349
transcript_98018.known	chr3	+	448	3	FSM	ENSG00000144642.22	ENST00000445077.1	448	3	0	0	0	0	multi-exon	FALSE	canonical	1	9	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGATTTCTTTTTTTTTTTTC	28576410	False	NA	NA	False	NA	NA	NA	28576427	28757595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_28576497_28757108_28757242_28757349
transcript_98021.nnic	chr3	-	1053	3	Antisense	novelGene_ENSG00000144642.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGCTATTAACTAAATTACC	NA	False	NA	NA	False	AATAAA	-27	NA	28575562	28556948	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_28557739_28573959_28574013_28575352
transcript_98024.nnic	chr3	-	675	3	Antisense	novelGene_ENSG00000144642.22_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGTTGTCTTGAGCAATGTT	NA	False	NA	NA	False	AATAAA	-20	NA	28575661	28569166	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_28569480_28573959_28574013_28575352
transcript_98027.known	chr3	-	738	2	FSM	ENSG00000235904.3	ENST00000635847.1	738	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTACTTTATCACATTTTTT	-29280889	False	NA	NA	False	AATAAA	-22	NA	29280904	29264193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_29264758_29280730
transcript_98028.nnic	chr3	-	890	3	NNC	ENSG00000227549.2	novel	776	2	NA	NA	-25144	-87	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTCTCCGCAGGAAGA	-30551363	True	NA	NA	False	NA	NA	NA	30551398	30524863	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_30525448_30527607_30527805_30551289
transcript_98029.nnic	chr3	-	774	3	Intergenic	novelGene_40	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	1	3	junction_1	0.5	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGATGTTATTTTTTAT	-30551348	True	NA	NA	False	ATTAAA	-15	NA	30551383	30527202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_30527805_30529982_30530061_30551289
transcript_9803.known	chr1	-	1108	5	FSM	ENSG00000286019.1	ENST00000593495.3	1108	5	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_4	24.9236333627343	261	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATTGACATTAACAGTGG	-148679091	True	NA	NA	False	AATAAA	-12	NA	148679779	148607039	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_148607160_148607409_148607746_148615690_148615951_148640015_148640090_148679461
transcript_98031.nnic	chr3	-	711	2	Intergenic	novelGene_41	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	0	0	junction_1	0	17	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TACACGATGTTATTTTTTAT	-30551363	True	NA	NA	False	ATTAAA	-15	NA	30551398	30527202	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Intergenic_chr3_-_30527805_30551289
transcript_98034.known	chr3	+	4107	16	FSM	ENSG00000163527.10	ENST00000295770.4	4107	16	0	0	0	0	multi-exon	TRUE	canonical	3	583	junction_6	53.1158063940376	183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTTAAGTGTTGTTTTTTAC	31529240	True	NA	21	True	AATAAA	-17	NA	31532924	31637616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_31533313_31576395_31576505_31579808_31580097_31596797_31596864_31600359_31600460_31615104_31615204_31616928_31617076_31617939_31617989_31619675_31619831_31622096_31622309_31623673_31623862_31624913_31625086_31625953_31626128_31629297_31629412_31632934_31633148_31635983
transcript_98040.known	chr3	-	758	5	FSM	ENSG00000144645.15	ENST00000466604.5	758	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	102.96206825817	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGGAGGGAGATGTGTG	-31959436	True	NA	-1	True	AATAAA	-18	NA	31960336	31822127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_31822244_31830039_31830232_31876432_31876513_31879654_31879831_31960142
transcript_98045.known	chr3	+	3947	8	FSM	ENSG00000152642.11	ENST00000282541.10	3947	8	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_6	6.59003576838331	35	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGCACCGTGGATCCTGTT	32105949	True	NA	7	True	AATAAA	-17	NA	32106619	32168709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32106759_32128075_32128254_32138586_32138728_32140227_32140367_32146621_32146735_32158875_32159110_32159567_32159675_32165813
transcript_98047.known	chr3	+	1169	4	FSM	ENSG00000170293.9	ENST00000307526.4	1169	4	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_3	8.04155872120988	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAATGTTGTGTTTGATTGG	32236581	True	NA	24	True	ATTAAA	-17	NA	32238679	32370321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32239120_32357372_32357547_32367871_32367989_32369883
transcript_98049.known	chr3	+	1856	5	FSM	ENSG00000153551.14	ENST00000334983.10	1856	5	0	0	0	0	multi-exon	FALSE	canonical	3	201	junction_2	75.4995860915807	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGAAGCAGCACCCGTGGTGT	32388801	True	NA	NA	False	NA	NA	NA	32391852	32455528	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32392066_32441839_32442014_32449453_32449553_32452391_32452474_32454240
transcript_98052.known	chr3	+	1214	4	FSM	ENSG00000153551.14	ENST00000349718.8	1214	4	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_2	118.016947935455	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTCGGCCAGTTGCACAAGGA	32391605	False	NA	7	True	AATAAA	-8	NA	32391697	32454830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32392066_32441839_32442014_32452391_32452474_32454240
transcript_98054.known	chr3	+	780	3	FSM	ENSG00000153551.14	ENST00000465248.1	780	3	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_2	163	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAAAATATTGACTCGGCCAG	32392028	False	NA	-4	True	NA	NA	NA	32392038	32454819	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32392066_32441839_32442014_32454240
transcript_98055.known	chr3	-	3307	4	FSM	ENSG00000091317.8	ENST00000205636.4	3307	4	0	0	0	0	multi-exon	FALSE	canonical	3	576	junction_1	31.6684210040363	1179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTACCTTTGTAAGTGTTTA	-32496258	True	NA	-11	True	AATAAA	-20	NA	32502852	32481311	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32484098_32487937_32488037_32491709_32491887_32502607
transcript_98058.known	chr3	-	2485	13	FSM	ENSG00000144635.9	ENST00000273130.9	2485	13	0	0	0	0	multi-exon	FALSE	canonical	3	286	junction_9	47.9409358829522	774	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAACTTGTTGCATTCTCTTA	-32562944	True	NA	-1	True	AATAAA	-29	NA	32570858	32525973	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32544875_32545107_32545848_32545966_32570345_32570420_32570624
transcript_98059.known	chr3	-	1827	11	FSM	ENSG00000144635.9	ENST00000432458.6	1827	11	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_9	123.549828004737	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AAAACTATCAGATAGCGTTT	-32562944	True	NA	87	True	AATAAA	-29	NA	32570858	32526283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32526909_32528445_32528602_32529539_32529661_32530283_32530329_32530460_32530521_32532985_32533098_32534510_32534647_32537010_32537105_32541036_32541207_32570345_32570420_32570624
transcript_9806.known	chr1	+	3642	1	FSM	ENSG00000177144.8	ENST00000322209.5	3642	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	250	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GCTAAAATATAAAACTTTTA	NA	False	NA	NA	False	AATAAA	-34	NA	148748773	148752415	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148748800_148752400
transcript_9807.known	chr1	+	2746	17	FSM	ENSG00000178104.19	ENST00000479408.6	2746	17	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_1	28.8638371279704	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTGGGCCAATAAAGTTTAT	NA	False	NA	-20	True	NA	NA	NA	148951936	148981746	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148952155_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_98070.known	chr3	+	2815	19	FSM	ENSG00000182973.20	ENST00000328834.10	2772	19	-43	0	0	0	multi-exon	FALSE	canonical	3	227	junction_12	23.3360448159992	176	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	32685119	False	NA	16	True	ATTAAA	-18	NA	32685144	32773875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32737409_32737491_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_98078.known	chr3	+	2573	18	FSM	ENSG00000182973.20	ENST00000331889.10	2573	18	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_12	63.9517010657586	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	32685119	False	NA	13	True	AATAAA	-20	NA	32685144	32773714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226_32713370_32716224_32716312_32717153_32717238_32720113_32720232_32725449_32725600_32727667_32727871_32733422_32733545_32734799_32734977_32759457_32759572_32762732_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_9809.known	chr1	+	8824	17	FSM	ENSG00000178104.19	ENST00000529945.2	8824	17	0	0	0	0	multi-exon	FALSE	canonical	3	88	junction_6	16.8076201096407	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTATTTGGTTTTATTCTTAA	148952329	False	NA	9	True	AATAAA	-22	NA	148952340	148986477	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_148953906_148960653_148960786_148961836_148961957_148962195_148962289_148962427_148962641_148965483_148965643_148966542_148966657_148966838_148966977_148967725_148967906_148968835_148969031_148972179_148972345_148972510_148972593_148974513_148974606_148977936_148978054_148978277_148978416_148979736_148979850_148981269
transcript_98098.nnic	chr3	+	850	7	NNC	ENSG00000182973.20	novel	2573	18	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.166537065759	18	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTGAGTCAATTCTACCCC	32678734	True	NA	13	True	AATAAA	-20	NA	32685187	32773714	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32685483_32703867_32703898_32762836_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_98099.nnic	chr3	+	1011	7	NNC	ENSG00000182973.20	novel	2772	19	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	107.166537065759	36	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTCTTTTACACTTTTATTGA	32678734	True	NA	16	True	ATTAAA	-18	NA	32685187	32773875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32685483_32703867_32703898_32762836_32762864_32764454_32764491_32764681_32764810_32769886_32769963_32773456
transcript_981.known	chr1	-	875	4	FSM	ENSG00000175756.14	ENST00000378853.3	875	4	0	0	0	0	multi-exon	FALSE	canonical	3	687	junction_3	1786.35214893369	1345	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCCTTTCCTGCGGGTCTGG	-1344473	True	NA	-30	True	AATAAA	-15	NA	1375173	1373736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1374996
transcript_98102.nic	chr3	+	881	5	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	-12	60365	-12	0	5prime_fragment	FALSE	canonical	3	254	junction_1	12.3768937944866	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	ACAAAAATGGAAAGAATGAG	NA	False	NA	NA	False	NA	NA	NA	32685132	32713349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226
transcript_98103.nic	chr3	+	1950	5	ISM	ENSG00000182973.20	ENST00000331889.10	2573	18	-12	59296	-12	1069	5prime_fragment	FALSE	canonical	3	254	junction_1	12.3768937944866	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATACATGGCTGGGCGTGG	NA	False	NA	NA	False	ATTAAA	-21	NA	32685132	32714418	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_32685483_32703867_32703963_32704810_32704973_32708669_32708821_32713226
transcript_98109.nnic	chr3	+	633	2	NNC	ENSG00000182973.20	novel	551	5	NA	NA	1	-22706	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTATTGTCTCTCTACAGT	32685120	False	NA	7	True	AGTAAA	-25	NA	32685145	32686069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32685483_32685773
transcript_98110.nnic	chr3	+	947	2	NNC	ENSG00000182973.20	novel	551	5	NA	NA	1	-22392	at_least_one_novel_splicesite	FALSE	canonical	2	12	junction_1	0	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTTAGTAGGTTCTGGTCAC	32685120	False	NA	NA	False	ATTAAA	-23	NA	32685145	32686383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_32685483_32685773
transcript_98114.known	chr3	-	2512	16	FSM	ENSG00000170266.16	ENST00000399402.7	2512	16	0	0	0	0	multi-exon	FALSE	canonical	3	73	junction_15	91.1371615874788	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTTGGTTTGATCTGTGG	-33096822	False	NA	0	True	AATAAA	-38	NA	33096835	32996608	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33096718
transcript_98115.known	chr3	-	2523	16	FSM	ENSG00000170266.16	ENST00000307363.10	2523	16	0	0	0	0	multi-exon	FALSE	canonical	3	384	junction_6	25.2899628750661	145	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGAAAATAGTCTTGGTTTG	-33093433	True	NA	-8	True	AATAAA	-30	NA	33097146	32996616	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_98123.known	chr3	-	2018	13	FSM	ENSG00000170266.16	ENST00000307377.12	2018	13	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_11	151.463325227228	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGATGTCACTGTTTTTAAT	-33093433	True	NA	-14	True	AATAAA	-16	NA	33097146	32996728	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_32997345_33014055_33014311_33016708_33016841_33018447_33018562_33021565_33021656_33024250_33024326_33046119_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33065462_33065558_33072543_33072714_33097010
transcript_9813.nnic	chr1	-	898	6	NNC	ENSG00000215861.7	novel	589	5	NA	NA	-64	7272	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_5	3.26190128606002	16	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAAGTTCTTGTCATTTCAA	NA	False	NA	NA	False	AATAAA	-22	NA	149240905	149190285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_149190532_149197995_149198172_149198360_149198485_149201013_149201091_149240376_149240488_149240741
transcript_98130.nic	chr3	-	1971	10	ISM	ENSG00000170266.16	ENST00000307363.10	2523	16	-35	48696	21	293	5prime_fragment	FALSE	canonical	3	388	junction_9	23.1756577276916	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTTTGTTTTCTTCTTTCAT	-33097168	False	NA	-20	True	AATAAA	-15	NA	33097181	33045312	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_33046233_33051757_33051799_33051882_33052005_33053490_33053550_33058088_33058270_33065462_33065558_33068229_33068291_33068819_33068971_33072543_33072714_33097010
transcript_98133.nnic	chr3	-	1102	3	NNC	ENSG00000188167.9	novel	3451	2	NA	NA	20	20613	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	36.5	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTAACTTATTACTGAGGAA	-33096768	False	3713	NA	False	AATAAA	-17	NA	33096781	33069807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_33070677_33072543_33072714_33096718
transcript_98135.known	chr3	+	6595	7	FSM	ENSG00000170275.15	ENST00000320954.11	6595	7	0	0	0	0	multi-exon	FALSE	canonical	1	287	junction_1	224.696585544942	100	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTCTCTATTTTCTATTCTAT	33105374	True	NA	5	True	ATTAAA	-17	NA	33114013	33147773	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_33114549_33120343_33120494_33124407_33124580_33129938_33130068_33132554_33132701_33134181_33134266_33142394
transcript_98138.known	chr3	+	1581	15	FSM	ENSG00000153558.16	ENST00000421391.5	1581	15	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_6	4.10077145554495	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GAAACCTGGATCTCTTAAGA	33277213	True	NA	NA	False	NA	NA	NA	33277476	33385862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_33277516_33297663_33297726_33358966_33359022_33359282_33359358_33364624_33364720_33373091_33373161_33373240_33373356_33373577_33373705_33373846_33373922_33375287_33375419_33377272_33377334_33378102_33378148_33378684_33378742_33383988_33384202_33385500
transcript_98140.known	chr3	-	4175	16	FSM	ENSG00000153560.12	ENST00000283629.8	4175	16	0	0	0	0	multi-exon	TRUE	canonical	3	130	junction_8	54.3472783740517	122	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTGTGTCTCATTTAAAATC	-33439134	True	NA	-1	True	AATAAA	-23	NA	33440405	33388335	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_33390369_33392562_33392615_33393311_33393455_33396161_33396281_33397044_33397136_33400188_33400283_33400961_33401017_33402800_33402905_33408689_33408798_33409235_33409347_33409448_33409602_33411580_33411688_33412721_33412828_33416757_33416835_33425589_33425742_33439735
transcript_98142.known	chr3	-	4524	2	FSM	ENSG00000271643.2	ENST00000604982.2	4524	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	11	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATGTAATTTCATTTGTC	-33798189	False	NA	NA	False	AATAAA	-35	NA	33798539	33793643	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_33798023_33798394
transcript_98143.known	chr3	+	5884	18	FSM	ENSG00000170248.15	ENST00000307296.8	5884	18	0	0	0	0	multi-exon	FALSE	canonical	3	421	junction_10	52.0893562838156	147	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCTTTGGAGTATGAATTC	33789046	True	NA	16	True	AATAAA	-17	NA	33798629	33869703	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33828852_33828970_33836043_33836267_33838203_33838328_33841896_33842075_33844111_33844224_33845418_33845589_33852487_33852737_33853878_33854014_33855165_33855261_33864005_33864130_33865242_33865431_33866350
transcript_98146.nnic	chr3	+	1178	7	NNC	ENSG00000170248.15	novel	5962	18	NA	NA	-2	393	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_6	191.657680948786	37	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATATGTTTCAACTACTTCC	33788985	True	NA	NA	False	AATAAA	-24	NA	33798568	33827270	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479_33826581_33826969
transcript_98147.nic	chr3	+	1311	6	ISM	ENSG00000170248.15	ENST00000648706.1	6049	19	-6	42666	-2	137	5prime_fragment	FALSE	canonical	3	457	junction_5	39.260157921231	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAACTTAACAAATTCATCT	33788985	True	NA	NA	False	CATAAA	-15	NA	33798568	33827014	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_33798938_33812071_33812127_33813558_33813629_33821954_33822083_33825186_33825341_33826479
transcript_98154.nnic	chr3	+	1072	3	NNC	ENSG00000144681.11	novel	476	3	NA	NA	-42	-4572	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_2	11	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGTTTATTTTACTATTAAT	36379947	False	NA	NA	False	AATACA	-19	NA	36380460	36454769	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_36380755_36443363_36443641_36454268
transcript_98155.nnic	chr3	-	675	3	NNC	ENSG00000168016.15	novel	11776	26	NA	NA	-29	-29882	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	6	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTGGCTTATGTGTTCTTT	-36944815	False	NA	NA	False	ATTAAA	-14	NA	36944890	36928988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_36929416_36930328_36930473_36944786
transcript_98156.known	chr3	-	543	3	FSM	ENSG00000178567.8	ENST00000623924.1	543	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	5.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACTGGCTTTTTTTTTTTTTT	-36991524	False	NA	NA	False	NA	NA	NA	36992940	36986809	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_36987230_36990375_36990436_36992877
transcript_98157.known	chr3	-	513	2	FSM	ENSG00000178567.8	ENST00000624586.1	513	2	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGCCTAAAGTAAACACTTTG	-36990852	False	NA	NA	False	TTTAAA	-7	NA	36992268	36990310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_36990436_36991880
transcript_98158.nic	chr3	-	1772	2	ISM	ENSG00000178567.8	ENST00000623924.1	543	3	-267	2184	-76	1317	5prime_fragment	FALSE	canonical	3	11	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	85	AAAAAAGAAAAAGAAAAAAG	-36991791	True	NA	NA	False	NA	NA	NA	36993207	36988993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_36990436_36992877
transcript_98159.known	chr3	-	8089	1	FSM	ENSG00000178567.8	ENST00000322716.8	8089	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	15	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACATCTGTCTTTCAGTGA	-36991715	True	NA	NA	False	AATAAA	-17	NA	36993131	36985042	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_36985000_36993100
transcript_98162.known	chr3	+	2494	19	FSM	ENSG00000076242.16	ENST00000231790.8	2494	19	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	50.3496723541756	301	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTCTTATTTAATTTTATTA	36990255	True	NA	20	True	AATAAA	-20	NA	36993517	37050846	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_98165.known	chr3	+	2428	19	FSM	ENSG00000076242.16	ENST00000435176.5	2428	19	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_3	105.564093221975	69	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTTCTTATTTAATTTTAT	36993279	True	NA	18	True	AATAAA	-18	NA	36993803	37050844	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993891_36996618_36996710_37000954_37001049_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_98167.known	chr3	+	2205	18	FSM	ENSG00000076242.16	ENST00000673673.1	2205	18	0	0	0	0	multi-exon	FALSE	canonical	1	7	junction_15	87.6017253468048	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATACACAGTGGATTGATTA	36990332	False	NA	-27	True	NA	NA	NA	36993594	37050799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37048516_37048610_37048903_37049018_37050485
transcript_98168.known	chr3	+	2403	18	FSM	ENSG00000076242.16	ENST00000674111.1	2403	18	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_14	88.792047400997	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTTTATACACAGTGGATTGA	36990232	True	NA	-30	True	NA	NA	NA	36993494	37050796	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_98175.known	chr3	+	1978	16	FSM	ENSG00000076242.16	ENST00000673715.1	1978	16	0	0	0	0	multi-exon	FALSE	canonical	3	248	junction_10	26.2470315781931	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCGGTGGCTCATGGCTGTA	36990260	True	NA	12	True	AATAAA	-14	NA	36993522	37047740	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37014431_37014545_37017505_37017600_37020309_37020464_37025636_37026008_37028783_37028933_37040185_37040295_37042267_37042332_37047518
transcript_98178.known	chr3	+	1712	15	FSM	ENSG00000076242.16	ENST00000673899.1	1712	15	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_8	97.0129646290765	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGACTTATACTTGCCTTCTG	36990226	True	NA	-59	True	NA	NA	NA	36993488	37050767	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_36993664_36996618_36996710_37000954_37001054_37004400_37004475_37006990_37007064_37008813_37008906_37011819_37011863_37012010_37012100_37028783_37028933_37040185_37040295_37042267_37042332_37047518_37047684_37048516_37048610_37048903_37049018_37050485
transcript_98194.known	chr3	+	7772	24	FSM	ENSG00000144674.17	ENST00000361924.7	7806	24	-94	128	-14	1	multi-exon	TRUE	canonical	3	27	junction_2	67.1943545652775	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTTATTGTACTTGTTC	37243146	False	NA	10	True	AATAAA	-20	NA	37243176	37366751	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_37243623_37251394_37251485_37281957_37282273_37286013_37286062_37289234_37289292_37294978_37295078_37296086_37296220_37298832_37299021_37299287_37299372_37302184_37302333_37315419_37315599_37319062_37319195_37321730_37321887_37323587_37327826_37328415_37328538_37328962_37329094_37335052_37335167_37337142_37337164_37337665_37337735_37340123_37340200_37347192_37347297_37355100_37355188_37361242_37361306_37366079
transcript_98198.nic	chr3	+	1111	3	ISM	ENSG00000144674.17	ENST00000450863.6	1617	11	-87	41390	-8	-7869	5prime_fragment	FALSE	canonical	3	101	junction_2	23.5	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	GATAATAATAATAATTATGA	37243164	True	NA	NA	False	NA	NA	NA	37243182	37274116	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_37243623_37251394_37251485_37273535
transcript_98199.known	chr3	+	7860	28	FSM	ENSG00000144668.12	ENST00000264741.10	7860	28	0	0	0	0	multi-exon	TRUE	canonical	2	6	junction_6	5.00397647089412	12	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTCAGAAGTTCAATCTGTAA	37451884	True	NA	5	True	AATAAA	-17	NA	37452140	37823507	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_37452560_37471006_37471135_37473353_37473461_37481483_37481608_37494500_37494569_37503177_37503308_37505999_37506086_37508558_37508628_37513762_37513901_37517503_37517610_37519259_37519355_37523520_37523612_37526025_37526072_37533313_37533469_37542424_37542586_37629186_37629337_37653713_37653791_37683864_37684016_37732711_37732799_37736903_37736984_37741729_37741820_37743925_37744035_37750461_37750570_37777391_37777518_37779901_37780022_37784976_37785079_37803822_37803943_37818890
transcript_982.known	chr1	-	798	4	FSM	ENSG00000175756.14	ENST00000321751.9	798	4	0	0	0	0	multi-exon	FALSE	canonical	3	212	junction_3	2010.08943969057	1494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCCTGCGGGTCTGGAGCTC	-1344469	True	NA	-25	True	AATAAA	-20	NA	1375169	1373731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375074
transcript_98204.nnic	chr3	-	422	4	FSM	ENSG00000235257.10	ENST00000686387.1	410	4	-12	0	-3	0	multi-exon	FALSE	canonical	3	4	junction_2	1.69967317119759	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTCAAGCTCTGTT	-37861575	True	NA	NA	False	AATAAA	-16	NA	37861790	37832764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37832939_37834678_37834768_37851423_37851493_37861700
transcript_98207.nnic	chr3	-	353	3	FSM	ENSG00000235257.10	ENST00000684787.1	334	3	-19	0	-3	0	multi-exon	FALSE	canonical	3	5	junction_2	1.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTTGCCTCAAGCTCTGTT	-37861575	True	NA	NA	False	AATAAA	-16	NA	37861790	37832764	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37832939_37834678_37834768_37861700
transcript_98209.known	chr3	-	895	4	FSM	ENSG00000235257.10	ENST00000366441.4	895	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1.69967317119759	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	100	AAAAAAAAAAAAAAAAAAAA	-37861550	True	NA	NA	False	NA	NA	NA	37861765	37818276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_37818931_37821013_37821101_37834678_37834768_37861700
transcript_98213.known	chr3	-	2963	15	FSM	ENSG00000187091.14	ENST00000463876.5	2963	15	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_14	17.6804111596849	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGCCTTGTGGTCTCTTTAC	-38023960	False	NA	-3	True	TATAAA	-16	NA	38024787	38007497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38024336
transcript_98214.known	chr3	-	2651	15	FSM	ENSG00000187091.14	ENST00000334661.5	2651	15	0	0	0	0	multi-exon	TRUE	canonical	3	49	junction_14	12.318270816895	59	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTTGTGGTCTCTTTACCT	-38028815	True	NA	-1	True	TATAAA	-18	NA	38029642	38007495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_38007859_38008013_38008164_38008234_38008368_38008457_38008637_38009041_38009159_38009271_38009432_38009652_38009812_38009903_38010054_38010130_38010276_38010360_38010563_38011213_38011446_38011543_38011674_38016490_38016720_38020187_38020353_38029505
transcript_98222.known	chr3	+	2667	5	FSM	ENSG00000172936.16	ENST00000650905.2	2667	5	0	0	0	0	multi-exon	FALSE	canonical	3	119	junction_3	13.3111795119741	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTGTGTGTGTTGAGTGG	38137063	True	NA	6	True	AATAAA	-20	NA	38138660	38143022	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140569_38140756_38140849_38141131
transcript_98223.known	chr3	+	2839	4	FSM	ENSG00000172936.16	ENST00000652590.1	2839	4	0	0	0	0	multi-exon	FALSE	canonical	3	131	junction_2	9.80929264637478	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TATTCTACCTTGGAAACTTG	38137063	True	NA	-10	True	AATAAA	-4	NA	38138660	38143006	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38139029_38139863_38139999_38140387_38140849_38141131
transcript_98227.nic	chr3	+	577	4	ISM	ENSG00000093217.11	ENST00000649234.1	2106	20	-80	50120	-25	6011	5prime_fragment	FALSE	canonical	3	19	junction_3	5.71547606649408	20	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTTTACTTTGGAGACTGTAT	38346186	True	NA	NA	False	AATAAA	-15	NA	38346734	38363169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_38346926_38348549_38348633_38360338_38360409_38362936
transcript_98228.nnic	chr3	+	416	3	NNC	ENSG00000093217.11	novel	1666	3	NA	NA	-25	-3	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	14.5	16	NA	NA	TRUE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATCTAGTTTATGGTATTT	38346186	True	NA	NA	False	AATAAA	-16	NA	38346734	38357155	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_38346926_38348549_38348633_38357013
transcript_98229.known	chr3	+	11782	11	FSM	ENSG00000114739.14	ENST00000352511.5	11782	11	0	0	0	0	multi-exon	TRUE	canonical	3	23	junction_4	5.08035431835222	87	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTTGTCTTTCTTAATTACG	38450256	True	NA	9	True	AATAAA	-16	NA	38453889	38493142	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38454375_38477286_38477495_38477860_38477971_38478140_38478293_38478374_38478519_38479127_38479272_38479677_38479827_38481350_38481466_38482197_38482337_38482429_38482561_38483137
transcript_98239.known	chr3	+	576	6	FSM	ENSG00000157036.13	ENST00000453767.1	576	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	22.3015694514983	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GAGCACCAGAAGTTCTGATT	38496389	True	NA	NA	False	NA	NA	NA	38496480	38523216	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523172
transcript_98240.known	chr3	+	3076	6	FSM	ENSG00000157036.13	ENST00000287675.10	3076	6	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_2	10.7443008148506	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGACATTGTTCTGCTCTTT	38495403	True	NA	6	True	GATAAA	-17	NA	38496339	38526303	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38497628_38497779_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_98242.known	chr3	+	1317	5	FSM	ENSG00000157036.13	ENST00000422077.6	1317	5	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	24.1285619132181	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGTTTTTGTCAGTATTATA	38495408	True	NA	NA	False	ACTAAA	-29	NA	38496344	38524699	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38501354_38501495_38503614_38503692_38506853_38506969_38523900
transcript_98245.known	chr3	+	197	2	FSM	ENSG00000157036.13	ENST00000630638.1	197	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTCCATAAGACTTGAGACTA	38495405	True	NA	NA	False	NA	NA	NA	38496341	38496850	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_38496531_38496842
transcript_98247.known	chr3	+	3965	19	FSM	ENSG00000114742.14	ENST00000302313.10	3965	19	0	0	0	0	multi-exon	TRUE	canonical	3	190	junction_12	23.6489892248702	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCAAAGTGTAGTACACAT	39049063	True	NA	12	True	AATAAA	-17	NA	39052015	39096664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39052074_39063049_39063191_39065810_39065890_39066547_39066631_39066745_39066876_39068770_39068860_39069642_39069745_39074725_39074951_39077138_39077214_39078136_39078240_39079710_39079809_39084154_39084263_39084644_39084742_39085514_39085611_39088127_39088234_39089230_39089319_39091624_39091702_39093873_39094067_39094647
transcript_98249.known	chr3	-	3046	9	FSM	ENSG00000114745.14	ENST00000319283.8	3046	9	0	0	0	0	multi-exon	FALSE	canonical	3	138	junction_4	18.3196445107431	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GACTGTCGAATTTTCTGGAA	-39105210	True	NA	0	True	AATACA	-25	NA	39107627	39096598	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_39098490_39098740_39098894_39099352_39099504_39100304_39100504_39100746_39100878_39101015_39101103_39102677_39102882_39103472_39103554_39107478
transcript_9825.known	chr1	+	918	3	FSM	ENSG00000274265.5	ENST00000667654.1	918	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	6.5	251	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCAGGCGTGATGGTATGTT	149174953	True	NA	NA	False	AATAAA	-34	NA	149175892	149251069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176251_149177157_149177213_149250564
transcript_98252.known	chr3	+	2426	7	FSM	ENSG00000168026.19	ENST00000479954.5	2426	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	3.25320354932386	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAACAAATTCAAGAA	39107585	True	NA	NA	False	AAAAAG	-14	NA	39107716	39119657	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39107865_39109084_39109215_39110028_39110140_39110850_39111018_39112457_39112581_39114584_39114743_39118068
transcript_98256.known	chr3	+	1986	4	FSM	ENSG00000168026.19	ENST00000493337.5	1986	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	4.49691252107735	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	95	AAAAAAAAAAAAGAAAAAAA	39107598	True	NA	NA	False	NA	NA	NA	39107729	39119631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39107865_39109084_39109215_39114584_39114743_39118068
transcript_98259.known	chr3	+	1251	2	FSM	ENSG00000287620.1	ENST00000669199.1	1251	2	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCATGGAGATGCTACTT	39177693	True	NA	NA	False	AATAAA	-19	NA	39177760	39179586	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39177929_39178503
transcript_98260.nnic	chr3	+	477	2	NNC	ENSG00000287620.1	novel	1251	2	NA	NA	-5	1929	at_least_one_novel_splicesite	FALSE	canonical	2	3	junction_1	0	17	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TCGGCAGATTTACTCAATCA	39177688	True	NA	NA	False	AATAAA	-16	NA	39177755	39181515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_39177929_39181211
transcript_98263.known	chr3	-	764	4	FSM	ENSG00000287780.1	ENST00000655387.1	764	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.471404520791032	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTATCTCTGTGCCTCTGTTT	-39384125	True	NA	NA	False	AATAAA	-30	NA	39384300	39292555	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_39292951_39380903_39381121_39382952_39383045_39384240
transcript_98268.known	chr3	+	2101	7	FSM	ENSG00000144659.13	ENST00000650617.1	2101	7	0	0	0	0	multi-exon	FALSE	canonical	3	174	junction_6	22.2816566310098	513	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTCTGTTCAAAAAAGCAGC	39379781	True	NA	65	True	NA	NA	NA	39383369	39397351	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39383794_39389494_39389617_39390422_39390508_39391440_39391621_39391852_39392022_39394409_39394577_39396397
transcript_98281.known	chr3	+	1032	7	FSM	ENSG00000168028.14	ENST00000443003.2	1032	7	0	0	0	0	multi-exon	FALSE	canonical	2	24	junction_3	2152.16424017004	13765	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AAAAGTTGTCTTCATTTAGT	39368055	True	NA	1	True	AATAAA	-12	NA	39406734	39412434	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_39406765_39407620_39407787_39408605_39408740_39410753_39411000_39411648_39411778_39411895_39412062_39412273
transcript_98282.known	chr3	-	1958	3	FSM	ENSG00000280739.4	ENST00000625390.2	1958	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTATTGGTCCTGTGTTATT	-40309324	True	NA	NA	False	TATAAA	-17	NA	40309542	40173144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40174723_40301236_40301397_40309322
transcript_98283.known	chr3	-	1983	3	FSM	ENSG00000280739.4	ENST00000663919.1	1983	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ATGTCAGGAGTTGTATTTTT	-40309290	True	NA	NA	False	NA	NA	NA	40309508	40246829	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40248472_40301236_40301397_40309327
transcript_98286.nnic	chr3	-	653	3	FSM	ENSG00000280739.4	ENST00000688606.1	588	3	-71	6	-54	-6	multi-exon	FALSE	canonical	0	0	junction_1	4	38	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATGGACTCTGTATTTTTTT	NA	False	NA	NA	False	AATAAA	-13	NA	40309613	40184383	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_40184586_40301236_40301397_40309322
transcript_98288.nic	chr3	-	791	2	ISM	ENSG00000280739.4	ENST00000663881.1	1377	3	-54	1828	-54	-1828	5prime_fragment	FALSE	canonical	2	8	junction_1	0	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAAAAAAAAATTACCATTCC	NA	False	NA	NA	False	AAAAAG	-8	NA	40309613	40300896	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_40301397_40309322
transcript_98303.known	chr3	+	987	4	FSM	ENSG00000114784.4	ENST00000232905.4	987	4	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	28.3117564901148	3767	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGAGTTCTCTCATTCTGC	40300074	True	NA	73	True	AGTAAA	-23	NA	40309706	40312424	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40309973_40310892_40311057_40311469_40311572_40311969
transcript_98304.known	chr3	+	873	2	FSM	ENSG00000114784.4	ENST00000462088.1	873	2	0	0	0	0	multi-exon	FALSE	canonical	3	875	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGGTTATTCAGCTTCAAGG	40300089	True	NA	NA	False	NA	NA	NA	40309721	40311514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40309973_40310892
transcript_98307.known	chr3	+	7072	6	FSM	ENSG00000188846.14	ENST00000338970.10	7072	6	0	0	0	0	multi-exon	FALSE	canonical	3	2862	junction_1	1004.99603979319	13001	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTAAGTTGTCATATTGTGAT	40349253	True	NA	10	True	AATAAA	-21	NA	40457291	40468587	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457364_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_9831.known	chr1	+	1006	2	FSM	ENSG00000274265.5	ENST00000668239.1	1006	2	0	0	0	0	multi-exon	FALSE	canonical	3	105	junction_1	0	957	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGGCGTGATGGTATG	149175723	False	NA	NA	False	AATAAA	-32	NA	149175747	149251067	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149176251_149250564
transcript_98311.known	chr3	+	812	6	FSM	ENSG00000188846.14	ENST00000416518.1	812	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	2574.097822539	965	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTATTTAAGCCTTTGGATT	40349315	True	NA	7	True	AATAAA	-25	NA	40457353	40462280	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457475_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461940
transcript_98313.known	chr3	+	966	6	FSM	ENSG00000188846.14	ENST00000435633.5	966	6	0	0	0	0	multi-exon	FALSE	canonical	3	36	junction_1	2122.01626760965	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAAGGGTCAAAAAGCTCCAG	40349324	True	NA	NA	False	NA	NA	NA	40457362	40462168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457748_40457889_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_98320.known	chr3	+	794	5	FSM	ENSG00000188846.14	ENST00000479563.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	4918	junction_3	250.022498987591	9566	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTCCTTTTTTTTTTTTTTT	40457849	False	NA	12	True	AATAAA	-14	NA	40457876	40462368	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40457992_40458641_40458737_40461406_40461507_40461607_40461662_40461938
transcript_98321.known	chr3	+	170	2	FSM	ENSG00000188846.14	ENST00000461368.1	170	2	0	0	0	0	multi-exon	FALSE	canonical	3	5557	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACACGATGGGCCAAGAAGAT	40457426	False	NA	14	True	AATACA	-13	NA	40458630	40461470	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40458737_40461406
transcript_98327.known	chr3	+	3291	5	FSM	ENSG00000177842.12	ENST00000314529.10	3291	5	0	0	0	0	multi-exon	TRUE	canonical	3	17	junction_3	8.5146931829632	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAATTTTTACCTATTATTAT	40503718	True	NA	NA	False	NA	NA	NA	40506038	40518736	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40506139_40506303_40506377_40511469_40511597_40512401_40512516_40515859
transcript_98337.nnic	chr3	+	555	3	NNC	ENSG00000177842.12	novel	2022	3	NA	NA	12	-5012	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	16.5	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTCGTCATGGTGTAT	40503683	True	NA	NA	False	ATTAAA	-23	NA	40506003	40507460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_40506139_40506303_40506377_40507113
transcript_98338.known	chr3	+	2022	3	FSM	ENSG00000177842.12	ENST00000418905.1	2022	3	0	0	0	0	multi-exon	FALSE	canonical	3	33	junction_2	2.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCTGAAATCTTTATCTCCCA	40503719	True	NA	5	True	AATAAA	-21	NA	40506039	40517709	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40506139_40506303_40506377_40515859
transcript_98340.nnic	chr3	+	516	3	NNC	ENSG00000177842.12	novel	2022	3	NA	NA	-3	-5012	at_least_one_novel_splicesite	FALSE	canonical	3	5	junction_2	4	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCGACTTCGTCATGGTGTAT	40503784	True	NA	NA	False	ATTAAA	-23	NA	40506104	40507460	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_40506201_40506303_40506377_40507113
transcript_98342.known	chr3	+	4841	5	FSM	ENSG00000177873.14	ENST00000432264.4	4841	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_3	3.76662979332984	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCAATCTGTGATATTCTGT	40476147	True	NA	NA	False	AATAAA	-21	NA	40477121	40491053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40486805
transcript_98343.known	chr3	+	2233	6	FSM	ENSG00000177873.14	ENST00000314686.9	2233	6	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_4	8.23164625090267	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCATGTTTGATTAGTTTCT	40476138	True	NA	7	True	TTTAAA	-16	NA	40477112	40488386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40477358_40477917_40478004_40481862_40482017_40482587_40482705_40483673_40483724_40486805
transcript_98345.known	chr3	+	8389	5	FSM	ENSG00000172888.12	ENST00000339296.10	8389	5	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_2	7.75806032459145	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTTGTTTTTAAGAGACAAAG	40524007	True	NA	NA	False	CATAAA	-16	NA	40524959	40539782	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40525275_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_98346.known	chr3	+	1979	5	FSM	ENSG00000172888.12	ENST00000403205.6	1979	5	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	10.7819293264239	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ATATACATTTAAAGACCGTG	40523925	True	NA	NA	False	CATAAA	-15	NA	40524877	40533526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40525039_40525778_40525865_40529318_40529446_40530208_40530317_40532029
transcript_98349.known	chr3	+	2613	4	FSM	ENSG00000172888.12	ENST00000431278.5	2613	4	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_2	8.05536398239638	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTGAATCTGTTGTGCA	40523945	True	NA	NA	False	AGTAAA	-21	NA	40524897	40534071	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40525275_40525778_40525865_40530208_40530317_40532029
transcript_9835.nnic	chr1	+	1549	4	Fusion	ENSG00000274265.5_ENSG00000272755.1	novel	1022	3	NA	NA	0	-5	multi-exon	FALSE	canonical	1	3	junction_3	3.2659863237109	23	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGCCCCTGTTTTGGTGATA	149174953	True	NA	NA	False	AATAAA	-16	NA	149175892	149264811	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr1_+_149176251_149259501_149259610_149262167_149262277_149263837
transcript_98353.known	chr3	+	255	1	FSM	ENSG00000234287.1	ENST00000457554.1	255	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	697	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGCACTCTGAGTCAAGATG	NA	False	NA	NA	False	NA	NA	NA	40761544	40761799	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_40761500_40761800
transcript_98362.nic	chr3	-	1932	18	NIC	ENSG00000168038.11	novel	1904	18	NA	NA	3	0	combination_of_known_junctions	TRUE	canonical	3	9	junction_1	7.66152477890115	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTGGGACTCCGTGTGGCAGT	-41960108	True	NA	0	True	AATAAA	-20	NA	41962112	41882149	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_41882281_41883873_41883953_41895517_41895565_41896821_41897004_41898431_41898493_41900724_41900830_41907844_41907942_41911316_41911387_41911540_41911660_41912806_41912900_41915976_41916053_41918456_41918541_41919716_41919819_41931843_41932007_41935800_41935941_41938097_41938198_41954621_41954808_41962015
transcript_98367.known	chr3	-	647	4	FSM	ENSG00000168038.11	ENST00000414606.1	647	4	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_1	11.5758369027902	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTTTACTGAATTTGGCTGT	-41960126	True	NA	NA	False	NA	NA	NA	41962130	41937094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_41937341_41938097_41938198_41954621_41954808_41962015
transcript_98371.known	chr3	+	2770	17	FSM	ENSG00000168036.18	ENST00000646116.1	2770	17	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	446.693892496584	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41173010	True	NA	NA	False	NA	NA	NA	41199524	41239904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239818
transcript_98375.known	chr3	+	3321	16	FSM	ENSG00000168036.18	ENST00000644678.1	3321	16	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_3	451.473833374895	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GATGGAATTTATCAAACCCT	41199283	True	NA	NA	False	NA	NA	NA	41199418	41239885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224189_41224322_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_98376.known	chr3	+	3472	16	FSM	ENSG00000168036.18	ENST00000396185.8	3472	16	0	0	0	0	multi-exon	FALSE	canonical	3	532	junction_15	216.184016265979	1529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTGTGTCACTCTTTCTTT	41199376	False	NA	26	True	ATTAAA	-15	NA	41199388	41240443	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_98377.known	chr3	+	2778	16	FSM	ENSG00000168036.18	ENST00000645982.1	2778	16	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_15	342.131709531091	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGTACTGACTTTGCTTGCTT	41172927	True	NA	NA	False	NA	NA	NA	41199441	41239955	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239812
transcript_98379.known	chr3	+	2784	16	FSM	ENSG00000168036.18	ENST00000647390.1	2784	16	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	377.938701672933	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCCTAGCCTTGCTTGTTAA	41172971	True	NA	NA	False	NA	NA	NA	41199485	41239900	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199623_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_9838.known	chr1	+	565	1	FSM	ENSG00000272755.1	ENST00000610119.1	565	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	8	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGTTTTGGTGATATTCTG	NA	False	NA	NA	False	AATAAA	-21	NA	149264251	149264816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149264300_149264800
transcript_98381.known	chr3	+	2890	16	FSM	ENSG00000168036.18	ENST00000642315.1	2890	16	0	0	0	0	multi-exon	FALSE	canonical	3	74	junction_1	369.393821761485	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41199433	True	NA	NA	False	NA	NA	NA	41200142	41239904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41200382_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235723_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133_41239355_41239659
transcript_98383.known	chr3	+	3086	15	FSM	ENSG00000168036.18	ENST00000644873.1	3086	15	0	0	0	0	multi-exon	FALSE	canonical	1	13	junction_10	350.073141045743	56	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TAGCCTTGCTTGTTAAATTT	41173023	True	NA	NA	False	NA	NA	NA	41199537	41239904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_41199671_41224020_41224082_41224525_41224754_41224953_41225208_41225333_41225573_41225659_41225862_41227207_41227353_41233340_41233445_41233528_41233868_41234138_41234298_41235726_41235844_41236348_41236500_41236587_41236710_41238015_41238077_41239133
transcript_9839.known	chr1	+	1850	5	FSM	ENSG00000286219.2	ENST00000652191.1	1850	5	0	0	0	0	multi-exon	FALSE	canonical	3	44	junction_1	22.9932055181525	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGGTAATTTGTTCATTTCA	149389748	True	NA	NA	False	ATTAAA	-32	NA	149390632	149464958	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149390923_149430933_149431016_149455317_149455578_149463490_149463827_149464076
transcript_98390.known	chr3	+	4620	13	FSM	ENSG00000182606.17	ENST00000341421.7	4620	13	0	0	0	0	multi-exon	TRUE	canonical	3	65	junction_1	34.1906419945575	23	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTAGATTATAGTTTTACTTT	42157851	True	NA	NA	False	ATTAAA	-20	NA	42160168	42212623	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42160474_42176813_42176891_42184684_42184802_42188044_42188146_42189015_42189125_42191557_42191637_42193074_42193206_42193823_42193899_42194803_42194942_42199176_42199254_42200817_42201055_42202435_42202753_42209766
transcript_98392.known	chr3	-	830	3	FSM	ENSG00000187094.12	ENST00000334681.9	830	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	2	118	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGTCGTTCCCTGCGTCTA	-42264763	True	NA	0	True	ATTAAA	-16	NA	42264903	42257824	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42258232_42263416_42263633_42264696
transcript_98434.known	chr3	+	646	6	FSM	ENSG00000114857.19	ENST00000442970.5	646	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_5	19.4525062652605	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAAAGGTTTGTATGTTTTCT	42592295	True	NA	NA	False	AATAAA	-19	NA	42600742	42620316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42600779_42600983_42601065_42617569_42617645_42619019_42619128_42619663_42619709_42620015
transcript_98441.known	chr3	+	1047	4	FSM	ENSG00000008324.12	ENST00000447630.5	1047	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	561.377472532223	7666	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAATAGTGATTTCTAATTA	NA	False	NA	NA	False	TATAAA	-29	NA	42581839	42595114	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42581959_42590808_42590967_42591524_42591602_42594421
transcript_98453.known	chr3	+	2134	2	FSM	ENSG00000114857.19	ENST00000459950.1	2134	2	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAGTAGATTGCTGAAGAGTA	42592270	True	NA	NA	False	AAAAAG	-16	NA	42600717	42603056	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42600779_42600983
transcript_98454.known	chr3	-	1608	7	FSM	ENSG00000093183.14	ENST00000273156.11	1608	7	0	0	0	0	multi-exon	TRUE	canonical	3	115	junction_1	35.8406969178273	395	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AACATGTGTCTTTGCACTTA	-42582012	False	NA	-24	True	AATAAA	-16	NA	42582028	42547970	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42548658_42555929_42555996_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_98455.known	chr3	-	461	2	FSM	ENSG00000230084.7	ENST00000434363.2	526	2	62	3	62	-3	multi-exon	FALSE	canonical	1	1	junction_1	0	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AAATTCAGTGCCTACCTTTC	-42654304	False	NA	NA	False	AATAAA	-13	NA	42654326	42632567	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42632696_42653993
transcript_98456.known	chr3	-	1458	6	FSM	ENSG00000093183.14	ENST00000423701.6	1458	6	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_1	70.2919625561842	30	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGTCTTTGCACTTATG	-42579843	True	NA	-22	True	AATAAA	-18	NA	42581942	42547968	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42548658_42557577_42557697_42561116_42561297_42563522_42563687_42568864_42569074_42581845
transcript_98464.known	chr3	-	585	4	FSM	ENSG00000181061.14	ENST00000452906.3	585	4	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_3	1443.72904506197	124	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTTGTTGGAGGAGCTTGC	-42778431	True	NA	-115	True	NA	NA	NA	42804433	42785251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794276_42804171
transcript_98466.known	chr3	-	1322	4	FSM	ENSG00000181061.14	ENST00000418900.6	1322	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	1460.20363876641	694	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTGTTATTAAAGTAAGTG	-42778486	True	NA	-44	True	NA	NA	NA	42804488	42784329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785321_42786027_42786163_42794156_42794300_42804435
transcript_98471.known	chr3	-	983	3	FSM	ENSG00000181061.14	ENST00000470543.1	983	3	0	0	0	0	multi-exon	FALSE	canonical	3	62	junction_2	1580	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTAATTTTTTCCATAAGAAT	-42778486	True	NA	-1	True	AATGAA	-23	NA	42804488	42784525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785321_42786027_42786163_42804435
transcript_98474.known	chr3	-	1267	6	FSM	ENSG00000244607.7	ENST00000492806.5	1267	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.8	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAATGCTCAGACTTGGGAC	-42773234	True	NA	NA	False	ATTAAA	-16	NA	42773253	42746793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42747374_42751935_42752026_42752574_42752718_42757065_42757215_42758124_42758352_42773175
transcript_98475.known	chr3	-	741	4	FSM	ENSG00000181061.14	ENST00000430190.5	741	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	1309.27061967935	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTGCATAAGAGTCCTATTTG	-42778488	True	NA	NA	False	NA	NA	NA	42804490	42784904	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_42785337_42786027_42786163_42794156_42794276_42804435
transcript_98476.known	chr3	+	3389	5	FSM	ENSG00000144649.10	ENST00000430121.3	3389	5	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.53553390593274	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTCTCTTAACTTTGTTT	42978616	True	NA	6	True	TATAAA	-21	NA	42979310	43057715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_42979646_43032266_43033554_43053520_43053644_43055431_43055536_43056175
transcript_98479.known	chr3	+	5188	7	FSM	ENSG00000163788.14	ENST00000296088.12	5188	7	0	0	0	0	multi-exon	FALSE	canonical	3	23	junction_1	4.11298755975102	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCGTGTCCTGTGTTGTATTG	43285729	True	NA	NA	False	AATAAA	-29	NA	43286539	43351143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43286676_43299753_43299816_43303097_43303793_43332168_43332311_43340286_43340500_43343343_43343479_43347338
transcript_98480.known	chr3	-	3155	13	FSM	ENSG00000160746.13	ENST00000292246.8	3155	13	0	0	0	0	multi-exon	FALSE	canonical	3	157	junction_10	18.9566391184373	123	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ACCCGGAGAAGGTGAGAAGG	-43619115	True	NA	NA	False	NA	NA	NA	43622011	43365847	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_98483.known	chr3	-	2419	12	FSM	ENSG00000160746.13	ENST00000396091.7	2419	12	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_10	55.3238400034494	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATTAAAGGCAACCTCTCTGA	-43619088	True	NA	-45	True	CATAAA	-17	NA	43621984	43366358	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43576691_43577262_43580352_43580473_43598531_43598667_43605713_43605864_43621908
transcript_98484.known	chr3	-	2039	12	FSM	ENSG00000160746.13	ENST00000350459.8	2039	12	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_7	58.0514163664312	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-43619069	True	NA	-34	True	ATTAAA	-6	NA	43621965	43366347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43574808_43574865_43580352_43580473_43598531_43598667_43600383_43600582_43605713_43605864_43621908
transcript_9849.nnic	chr1	-	1468	5	NNC	ENSG00000234232.7	novel	1537	5	NA	NA	103	635	intron_retention	FALSE	canonical	2	4	junction_1	6.64736790015417	35	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGTTTATATTTATTTATTG	-149747647	True	NA	NA	False	AATAAA	-16	NA	149747674	149719895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_-_149720113_149726882_149727071_149728229_149728282_149729377_149729614_149746899
transcript_98493.nnic	chr3	-	1576	7	NNC	ENSG00000160746.13	novel	2039	12	NA	NA	-10924	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_6	75.9745937066391	21	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTCTCTGACTCCTTCTGCC	-43566299	True	NA	-34	True	ATTAAA	-6	NA	43566335	43366347	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_43366975_43432610_43432728_43549719_43549849_43555277_43555470_43561219_43561403_43565652_43565728_43566082
transcript_98508.nic	chr3	-	845	2	ISM	ENSG00000160746.13	ENST00000414522.6	2450	13	249061	-203	-6742	-5	3prime_fragment	FALSE	canonical	3	15	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCAACCTCTCTGACTCCTT	NA	False	NA	-39	True	ATTAAA	-1	NA	43372950	43366352	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_43366975_43372727
transcript_98509.known	chr3	-	515	2	FSM	ENSG00000223916.1	ENST00000413663.1	515	2	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	0	14	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGCAGGGCCCTTGCCTGGG	NA	False	NA	NA	False	NA	NA	NA	43485880	43484971	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43485243_43485636
transcript_98513.known	chr3	+	5298	7	FSM	ENSG00000011198.10	ENST00000644371.2	5298	7	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_5	11.3639292891539	92	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTCAGTAGTTTTATTTTTAG	43689997	True	NA	20	True	AATAAA	-13	NA	43690937	43722725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43717670_43717858_43718442
transcript_98517.known	chr3	+	1241	6	FSM	ENSG00000011198.10	ENST00000458276.7	1241	6	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	38.4832431065782	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TGATGTACTGAAAAACTGTA	43689939	True	NA	21	True	AATAAA	-17	NA	43690879	43718797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275_43699362_43702214_43702588_43711708_43711864_43714946_43715059_43718442
transcript_98521.nic	chr3	+	509	3	ISM	ENSG00000011198.10	ENST00000013894.3	842	7	-78	15199	-7	12	5prime_fragment	FALSE	canonical	0	0	junction_2	54.5	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAATACTTTCCAAACATTG	43689932	True	NA	NA	False	AATAAA	-26	NA	43690872	43699757	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_43691040_43699275_43699362_43699501
transcript_98523.known	chr3	+	618	2	FSM	ENSG00000011198.10	ENST00000486764.1	618	2	0	0	0	0	multi-exon	FALSE	canonical	3	109	junction_1	0	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAGAAAAAAAATACT	43689951	True	NA	NA	False	AATAAA	-14	NA	43690891	43699745	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_43691040_43699275
transcript_98524.known	chr3	-	1069	1	FSM	ENSG00000272121.1	ENST00000606217.1	1069	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	85	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCTGTTTCTACACTGGATT	-43999003	True	NA	2	True	ATTAAA	-19	NA	43999149	43998080	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_43998100_43999100
transcript_98527.known	chr3	+	1844	11	FSM	ENSG00000179152.20	ENST00000417237.5	1844	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	15.9088025947901	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TAACTGCTGCTTTAAAAGTA	44336248	True	NA	44	True	NA	NA	NA	44338118	44407790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_98530.nic	chr3	+	3431	11	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	22	junction_4	15.0983442800858	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	44336243	True	NA	5	True	AATAAA	-17	NA	44338113	44409448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_98531.known	chr3	+	3370	11	FSM	ENSG00000179152.20	ENST00000342649.9	3370	11	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_4	15.8189759466282	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TAACTGTTTTTTTCTTGTTA	44338363	True	NA	5	True	AATAAA	-17	NA	44338765	44409448	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367455_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_98533.known	chr3	+	3306	11	FSM	ENSG00000179152.20	ENST00000412611.6	3306	11	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	14.9803204238094	21	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTTTTTTTCTTGTTACCC	44338354	True	NA	8	True	AATAAA	-20	NA	44338756	44409451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531_44367709_44392854_44392978_44396399_44396498_44396742_44396835_44400354_44400588_44401202_44401335_44407441
transcript_98548.nic	chr3	+	1187	5	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	-5	0	combination_of_known_junctions	FALSE	canonical	3	14	junction_4	24.2834820402676	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	44336243	True	NA	11	True	AATAAA	-13	NA	44338113	44363037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44338320_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_98551.known	chr3	+	1056	5	FSM	ENSG00000179152.20	ENST00000444602.2	1056	5	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_4	23.8746727726266	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	44338357	True	NA	11	True	AATAAA	-13	NA	44338759	44363037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44362419
transcript_98553.known	chr3	+	794	5	FSM	ENSG00000179152.20	ENST00000462230.5	794	5	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_4	21.6794833886788	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATTATGAAAAATATATTTC	44338730	False	NA	NA	False	NA	NA	NA	44338751	44367879	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44361364_44361519_44367531
transcript_98555.known	chr3	+	1998	4	FSM	ENSG00000179152.20	ENST00000383746.7	1998	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.9131825880731	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTCTGAGTTCTGTGAATC	44336248	True	NA	11	True	AATAAA	-23	NA	44338118	44359804	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338320_44354738_44354812_44357740_44357877_44358216
transcript_98560.known	chr3	+	594	4	FSM	ENSG00000179152.20	ENST00000494638.5	594	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	12.657891697365	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGACAAGTCTTATTACTCCT	44336251	True	NA	NA	False	NA	NA	NA	44338121	44367624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338320_44354738_44354812_44361364_44361519_44367455
transcript_98561.nnic	chr3	+	1099	4	NIC	ENSG00000179152.20	novel	1844	11	NA	NA	7	0	combination_of_known_splicesites	FALSE	canonical	1	2	junction_1	14.9666295470958	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATCTGTTTTTATTTGTATG	44336258	True	NA	11	True	AATAAA	-13	NA	44338128	44363037	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44338320_44357740_44357877_44361364_44361519_44362419
transcript_98562.known	chr3	+	2178	4	FSM	ENSG00000179152.20	ENST00000396078.7	2178	4	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_3	24.0739601136904	49	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTGAGTTCTGTGAA	44338364	True	NA	9	True	AATAAA	-21	NA	44338451	44359802	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44338835_44354738_44354812_44357740_44357877_44358216
transcript_98566.known	chr3	-	612	1	FSM	ENSG00000271937.1	ENST00000607510.1	612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	72	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TCTTTTCCGGCTTGTGTTGT	-44338533	False	NA	NA	False	TATAAA	-22	NA	44338552	44337940	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44337900_44338600
transcript_98567.known	chr3	-	18314	8	FSM	ENSG00000185219.18	ENST00000396077.8	18314	8	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	3.92272291935599	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTACGTTTGTCAGTTTTATG	-44474370	True	NA	NA	False	AATAAA	-32	NA	44477670	44431704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44448740_44449512_44449624_44450446_44450574_44450867_44450963_44451313_44451483_44455120_44455697_44458243_44458365_44477590
transcript_98568.known	chr3	+	838	4	FSM	ENSG00000283036.3	ENST00000634998.2	838	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.942809041582063	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATCCAGTGTTTCATTATTT	NA	False	NA	NA	False	AATAAA	-16	NA	44427949	44429529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44428159_44428554_44428625_44428846_44428942_44429065
transcript_98573.nnic	chr3	-	577	3	NNC	ENSG00000185219.18	novel	18314	8	NA	NA	-17	1960	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTCTGAAACAAATTT	-44474387	True	NA	NA	False	NA	NA	NA	44477687	44452918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44453370_44458335_44458365_44477590
transcript_98574.nnic	chr3	-	584	3	NNC	ENSG00000185219.18	novel	18314	8	NA	NA	-17	1960	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	14.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAGATTTCTGAAACAAATTT	-44474387	True	NA	NA	False	NA	NA	NA	44477687	44452918	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44453377_44458335_44458365_44477590
transcript_98579.nnic	chr3	-	1803	5	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	-14	3081	at_least_one_novel_splicesite	FALSE	canonical	3	9	junction_4	13.6633634219397	26	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506637	True	NA	-4	True	AATAAA	-19	NA	44510650	44491765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44502964_44503057_44510552
transcript_98585.nnic	chr3	-	1691	4	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	6	3081	at_least_one_novel_splicesite	TRUE	canonical	3	24	junction_3	7.58653778449403	44	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506617	True	NA	-4	True	AATAAA	-19	NA	44510630	44491765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44492508_44499893_44500638_44502541_44502669_44510552
transcript_98586.nic	chr3	-	1180	4	NIC	ENSG00000178917.17	novel	1966	5	NA	NA	-14	-199	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.0554457615387	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCTTCAGTCGGAGTAAATG	-44506637	True	NA	NA	False	TATAAA	-19	NA	44510650	44499774	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_44500638_44502541_44502669_44502964_44503057_44510552
transcript_98587.nic	chr3	-	1047	4	NIC	ENSG00000178917.17	novel	1966	5	NA	NA	-14	-332	combination_of_known_junctions	FALSE	canonical	3	9	junction_3	14.0554457615387	22	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCTGCACACTGGTAAGA	-44506637	True	NA	NA	False	AGTAAA	-18	NA	44510650	44499907	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_44500638_44502541_44502669_44502964_44503057_44510552
transcript_98588.nnic	chr3	-	1562	3	NNC	ENSG00000178917.17	novel	1326	3	NA	NA	8	3081	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_2	18.5	10	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTGATTTTATTTTTTTCAC	-44506615	True	NA	-4	True	AATAAA	-19	NA	44510628	44491765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44492508_44499893_44500638_44510552
transcript_98589.known	chr3	-	1326	3	FSM	ENSG00000178917.17	ENST00000489411.1	1326	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	9	44	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TCCTTCAATCAAAACTCATA	-44506623	True	NA	NA	False	TATAAA	-19	NA	44510636	44499522	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44500638_44502541_44502669_44510552
transcript_98593.nnic	chr3	-	1170	2	NNC	ENSG00000178917.17	novel	1966	5	NA	NA	3	-6262	at_least_one_novel_splicesite	FALSE	canonical	3	15	junction_1	0	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TACTTGGATTGTTTCTTCCT	-44506620	True	NA	-1	True	AATAAA	-19	NA	44510633	44505837	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_44506927_44510552
transcript_98596.known	chr3	+	7530	6	FSM	ENSG00000186448.15	ENST00000344387.9	7530	6	0	0	0	0	multi-exon	TRUE	canonical	3	15	junction_1	14.2042247236518	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624128	True	NA	9	True	AATAAA	-19	NA	44625035	44648471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44625144_44629073_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44641899
transcript_98598.known	chr3	+	2935	6	FSM	ENSG00000186448.15	ENST00000383745.6	2935	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	19.70786644972	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCAGGGCTTTCTACAGATTA	44624141	True	NA	9	True	AATAAA	-19	NA	44625048	44648471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44625144_44629064_44629545_44631061_44631222_44632104_44632197_44632472_44632600_44646490
transcript_98601.nic	chr3	+	414	3	ISM	ENSG00000144792.9	ENST00000441021.5	556	4	-140	7045	-138	548	5prime_fragment	FALSE	canonical	0	0	junction_2	15.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTAAAGCCTCTCTCTCTCTC	NA	False	NA	NA	False	ATTAAA	-17	NA	44584823	44587250	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44585008_44586104_44586214_44587129
transcript_98602.known	chr3	+	5834	3	FSM	ENSG00000144792.9	ENST00000322734.2	5834	3	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	1	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TATCACTTTTTTTTTCTTTT	44583297	True	NA	NA	False	AATAAA	-20	NA	44584963	44599694	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44585008_44586104_44586214_44594013
transcript_98610.known	chr3	-	623	2	FSM	ENSG00000233509.2	ENST00000447691.2	623	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CTGTGAATGAATGAGTATTA	-44624726	False	NA	NA	False	NA	NA	NA	44624797	44617127	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44617675_44624721
transcript_98611.known	chr3	+	620	4	FSM	ENSG00000169981.11	ENST00000415571.6	620	4	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_1	11.5566238822398	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCCCTCATCATATCAGAAAG	44647215	True	NA	NA	False	NA	NA	NA	44648740	44658765	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648835_44650943_44651260_44652556_44652702_44658700
transcript_98614.known	chr3	+	2503	3	FSM	ENSG00000169981.11	ENST00000296092.7	2503	3	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_1	2.5	32	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTTGTCTCTGCTGTCATTCT	44647216	True	NA	25	True	AATAAA	-23	NA	44648741	44660791	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648835_44650940_44651260_44658700
transcript_98616.known	chr3	+	564	3	FSM	ENSG00000169981.11	ENST00000399560.2	564	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTCAGACAAGTGATAG	44647216	True	NA	NA	False	AATAAA	-13	NA	44648741	44658878	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44648812_44650943_44651260_44658700
transcript_98617.known	chr3	+	3270	4	FSM	ENSG00000196653.12	ENST00000296091.8	3270	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	9.93310961716756	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGCTTGGTTATTTGGAACTC	44712288	True	NA	11	True	ATTAAA	-22	NA	44712645	44723831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44712745_44714590_44714689_44720202_44720317_44720872
transcript_98618.known	chr3	+	593	3	FSM	ENSG00000196653.12	ENST00000411443.1	593	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	11	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAATGTAATGAATGTGGAAA	44712318	True	NA	NA	False	AGTAAA	-34	NA	44712675	44721282	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44712745_44720202_44720317_44720872
transcript_98620.nic	chr3	+	374	3	NIC	ENSG00000186446.12	novel	3099	3	NA	NA	-3	0	combination_of_known_junctions	FALSE	canonical	2	9	junction_2	8.5	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTTTCAAGTGATTTC	44728288	True	NA	NA	False	ATTAAA	-19	NA	44729592	44732265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_44729723_44731475_44731561_44732106
transcript_98621.known	chr3	+	3099	3	FSM	ENSG00000186446.12	ENST00000396048.6	3099	3	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_1	9	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	44728291	True	NA	7	True	AATAAA	-19	NA	44729595	44737083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44729723_44731475_44731561_44734196
transcript_98624.known	chr3	+	479	3	FSM	ENSG00000186446.12	ENST00000484233.1	479	3	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_2	4.5	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTGGGTTTCAAGTGATTTC	44728476	False	NA	NA	False	ATTAAA	-19	NA	44729780	44732265	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44730016_44731475_44731561_44732106
transcript_98625.known	chr3	+	3353	3	FSM	ENSG00000186446.12	ENST00000620116.5	3353	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	13	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCCAGTGTGTCATTGTCTT	44728330	True	NA	7	True	AATAAA	-19	NA	44729634	44737083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44730016_44731475_44731561_44734196
transcript_9863.nnic	chr1	+	733	3	NNC	ENSG00000277147.7	novel	737	3	NA	NA	-109	-3	intron_retention	FALSE	canonical	0	0	junction_2	34	24	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	149606417	True	NA	14	True	AATAAA	-28	NA	149607197	149647621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_149607555_149646598_149646734_149647380
transcript_98632.known	chr3	-	5079	3	FSM	ENSG00000163807.6	ENST00000296121.6	5079	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	4	1183	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGAGTGTTGTCTGTAATT	-44755778	True	NA	NA	False	AATAAA	-16	NA	44761619	44748743	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44753553_44754223_44754369_44761494
transcript_98633.known	chr3	+	4760	35	FSM	ENSG00000163808.17	ENST00000326047.9	4760	35	0	0	0	0	multi-exon	FALSE	canonical	3	146	junction_21	15.2142712097197	50	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTAAAGTGACTTACATTGTT	44759112	True	NA	9	True	AATAAA	-21	NA	44761793	44853256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114_44778192_44780884_44780923_44784844_44784943_44786394_44786575_44794216_44794427_44797550_44797677_44797833_44797957_44800313_44800438_44801449_44801527_44801764_44801975_44802813_44802992_44805026_44805169_44805844_44805987_44810845_44811044_44812181_44812290_44813074_44813181_44814910_44815077_44826038_44826190_44826374_44826461_44827458_44827529_44828213_44828301_44829970_44830076_44830895_44831019_44838274_44838422_44840354_44840457_44841073_44841239_44843124_44843235_44847984_44848058_44848520_44848559_44851786_44851953_44852207_44852340_44852672
transcript_98635.nic	chr3	+	1263	4	ISM	ENSG00000163808.17	ENST00000326047.9	4760	35	-41	74238	32	-34252	5prime_fragment	FALSE	canonical	3	158	junction_1	10.1434160364686	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATTTGTCTGTTTTCCACAT	44759071	True	NA	NA	False	AAAAAG	-4	NA	44761752	44779018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44761885_44774394_44774438_44775253_44775438_44778114
transcript_98639.nnic	chr3	+	1195	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-40	0	at_least_one_novel_splicesite	FALSE	canonical	3	22	junction_1	34.4770455037358	132	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860362	True	NA	12	True	AATAAA	-22	NA	44861863	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862117_44862357_44862528_44864196_44864344_44865039
transcript_9864.nnic	chr1	+	932	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	19	-3	intron_retention	FALSE	canonical	3	21	junction_2	23.5	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	149607034	False	NA	14	True	AATAAA	-28	NA	149607050	149647621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_149607555_149646598_149646786_149647380
transcript_98642.nnic	chr3	+	1088	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	27	junction_1	32.2628096868343	228	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860368	True	NA	12	True	AATAAA	-22	NA	44861869	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865039
transcript_98643.nnic	chr3	+	993	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-34	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_3	25.9529488797623	76	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860368	True	NA	12	True	AATAAA	-22	NA	44861869	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44862357_44862528_44864196_44864344_44865134
transcript_98649.nnic	chr3	+	997	4	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-16	0	at_least_one_novel_splicesite	FALSE	canonical	2	7	junction_1	41.2148840428633	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860386	True	NA	12	True	AATAAA	-22	NA	44861887	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44862430_44862528_44864196_44864344_44865039
transcript_9865.known	chr1	+	737	3	FSM	ENSG00000277147.7	ENST00000621156.1	737	3	0	0	0	0	multi-exon	FALSE	canonical	3	52	junction_2	8	272	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	149606628	False	NA	17	True	AATAAA	-31	NA	149607408	149647624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149607555_149646598_149646946_149647380
transcript_9866.nic	chr1	+	1072	3	NIC	ENSG00000277147.7	novel	737	3	NA	NA	-119	-5	intron_retention	FALSE	canonical	3	38	junction_2	15	88	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	149606407	True	NA	12	True	AATAAA	-26	NA	149607187	149647619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_149607555_149646598_149647065_149647380
transcript_98660.nnic	chr3	+	919	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-35	0	at_least_one_novel_splicesite	TRUE	canonical	3	25	junction_1	40	189	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860367	True	NA	12	True	AATAAA	-22	NA	44861868	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44864196_44864344_44865039
transcript_98661.nnic	chr3	+	824	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-35	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	3.5	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860367	True	NA	12	True	AATAAA	-22	NA	44861868	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862016_44864196_44864344_44865134
transcript_98662.known	chr3	+	977	3	FSM	ENSG00000169964.8	ENST00000302392.5	977	3	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	40.5	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860410	True	NA	12	True	AATAAA	-22	NA	44861911	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44862117_44864196_44864344_44865039
transcript_98663.nnic	chr3	+	917	3	NNC	ENSG00000169964.8	novel	977	3	NA	NA	-27	0	at_least_one_novel_splicesite	FALSE	canonical	3	18	junction_2	3	57	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTACCAGGTACGGTATCTTA	44860375	True	NA	12	True	AATAAA	-22	NA	44861876	44865664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_44862117_44864196_44864344_44865134
transcript_98674.known	chr3	+	1593	9	FSM	ENSG00000075914.13	ENST00000461361.5	1593	9	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	501.542230898855	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATGGTTGATTCCAGTGGAT	NA	False	NA	13	True	AATAAA	-21	NA	44975240	45012666	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44975477_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_9868.nnic	chr1	+	1054	3	NNC	ENSG00000277147.7	novel	737	3	NA	NA	-18	5	at_least_one_novel_splicesite	TRUE	canonical	0	0	junction_1	0.5	31	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGTGATTTTTCAGTTGA	149606508	True	NA	NA	False	AATAAA	-23	NA	149607288	149705721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_149607555_149698629_149698874_149705177
transcript_98681.known	chr3	-	3101	8	FSM	ENSG00000163812.15	ENST00000296127.7	3101	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_3	82.630725125064	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AAAAAGAAAAGAATGCTGTT	-44970231	True	NA	NA	False	NA	NA	NA	44976182	44924845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44926848_44929305_44929437_44932906_44932991_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_98682.known	chr3	+	831	7	FSM	ENSG00000075914.13	ENST00000468667.5	831	7	0	0	0	0	multi-exon	FALSE	canonical	3	76	junction_1	542.97626303755	25	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGCATTTGCTCTCTGCAT	44966406	True	NA	NA	False	AAAACA	-43	NA	44976250	45012253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_98685.known	chr3	-	12594	7	FSM	ENSG00000163812.15	ENST00000424952.7	12594	7	0	0	0	0	multi-exon	TRUE	canonical	3	162	junction_2	33.2536547698979	152	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACTGGAGTCTCCTGTTT	-44970223	True	NA	-3	True	AATAAA	-21	NA	44976174	44915260	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44959130_44959461_44975932
transcript_98686.nic	chr3	+	883	6	ISM	ENSG00000075914.13	ENST00000468667.5	831	7	-45	782	-38	0	5prime_fragment	FALSE	canonical	3	76	junction_1	466.072269074228	386	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	44966361	True	NA	7	True	ATTAAA	-16	NA	44976205	45011471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_44976335_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_98694.known	chr3	-	1336	8	FSM	ENSG00000163812.15	ENST00000342790.8	1336	8	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	88.9741994246945	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	TTAAATCGAAAAAGCAAAAC	-44970215	True	NA	-112	True	NA	NA	NA	44976166	44926612	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_44926848_44929305_44929437_44933117_44933200_44933887_44933985_44945167_44945293_44958587_44958686_44959126_44959461_44975932
transcript_98701.known	chr3	+	1042	8	FSM	ENSG00000075914.13	ENST00000265564.8	1042	8	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_2	79.7682868804184	8410	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGTTTGGTATGTCTAGAGT	44966399	True	NA	7	True	ATTAAA	-16	NA	44976243	45011471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234
transcript_98702.known	chr3	+	1395	9	FSM	ENSG00000075914.13	ENST00000491476.5	1395	9	0	0	0	0	multi-exon	FALSE	canonical	3	90	junction_8	370.022106603106	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAGTGTGAATAAAGTTTAGA	44966419	True	NA	-20	True	AAAACA	-30	NA	44976263	45012633	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_44976335_44989139_44989242_44989549_44989645_44997086_44997253_45001537_45001609_45005290_45005415_45007419_45007576_45011234_45011394_45012182
transcript_98703.known	chr3	+	434	3	FSM	ENSG00000075914.13	ENST00000459856.1	434	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	43.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGTTGATTCCAGTGGATCA	45011208	False	NA	15	True	AATAAA	-23	NA	45011232	45012668	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45011394_45012182_45012291_45012503
transcript_98704.known	chr3	-	1416	4	FSM	ENSG00000163814.8	ENST00000425231.2	1416	4	0	0	0	0	multi-exon	FALSE	canonical	3	104	junction_1	3.29983164553722	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GGCATTGAAAGGTCATTTTT	-45145647	True	NA	3	True	AATAAA	-42	NA	45146422	45110215	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45110842_45112082_45112446_45118411_45118622_45146205
transcript_98706.known	chr3	-	5963	9	FSM	ENSG00000163814.8	ENST00000296129.6	5963	9	0	0	0	0	multi-exon	FALSE	canonical	3	75	junction_2	13.2641433948823	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGGTTTTCAAGTCTCC	-45145603	True	NA	-2	True	AATAAA	-25	NA	45146378	45082276	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45086068_45089053_45089142_45091172_45091539_45093276_45093658_45095346_45095569_45110472_45110842_45112082_45112446_45118411_45118622_45146205
transcript_98707.known	chr3	+	4781	22	FSM	ENSG00000011376.12	ENST00000645846.2	4781	22	0	0	0	0	multi-exon	FALSE	canonical	3	161	junction_5	20.8118664912129	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTGGTACAAGGAAGGAGTG	45381707	True	NA	9	True	ATTAAA	-19	NA	45388575	45549407	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45388681_45391582_45391649_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_98708.known	chr3	+	10049	21	FSM	ENSG00000011376.12	ENST00000650792.2	10049	21	0	0	0	0	multi-exon	TRUE	canonical	3	11	junction_1	46.5365447793452	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGGCCATGGTATATTGAGTG	45381692	True	NA	13	True	AATAAA	-28	NA	45388560	45554726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45388681_45394432_45394688_45400244_45400374_45417481_45417574_45419668_45419730_45446890_45446981_45458742_45458887_45474242_45474351_45476467_45476628_45485691_45485797_45488696_45488813_45491516_45491801_45496274_45496374_45500441_45500580_45513134_45513236_45516093_45516277_45517902_45518073_45520218_45520297_45523996_45524109_45541828_45541957_45547350
transcript_98716.known	chr3	+	2773	6	FSM	ENSG00000144791.10	ENST00000440097.5	2773	6	0	0	0	0	multi-exon	FALSE	canonical	3	69	junction_2	3.63318042491699	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	CCAAAAAAAACCCCACTTCA	45594313	False	NA	NA	False	NA	NA	NA	45594323	45673898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45596288_45636149_45636252_45665649_45665718_45668293_45668357_45672689_45672821_45673453
transcript_98717.known	chr3	+	1830	20	FSM	ENSG00000211456.13	ENST00000672858.2	1830	20	0	0	0	0	multi-exon	TRUE	canonical	3	484	junction_4	29.9496345456549	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCCGCTTTCCACATCAGCCC	45679263	False	NA	NA	False	NA	NA	NA	45689465	45743735	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779_45706908_45709497_45709648_45713136_45713197_45714045_45714080_45719499_45719602_45721999_45722086_45722868_45722956_45723474_45723544_45731300_45731381_45732052_45732152_45735234_45735374_45737582_45737653_45737771_45737845_45738577_45738672_45738780_45738874_45739586_45739645_45743532
transcript_98728.known	chr3	+	854	4	FSM	ENSG00000211456.13	ENST00000463347.5	854	4	0	0	0	0	multi-exon	FALSE	canonical	3	552	junction_1	23.6220236220354	36	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GTTTATGAAATGTGTATATA	45679153	True	NA	NA	False	NA	NA	NA	45689355	45707318	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45689498_45703437_45703536_45705134_45705210_45706779
transcript_98729.known	chr3	-	1384	2	FSM	ENSG00000230530.2	ENST00000655322.1	1384	2	0	0	0	0	multi-exon	FALSE	canonical	3	42	junction_1	0	257	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTCCTTGTGTTTTCTTTCTA	NA	False	NA	2	True	TTTAAA	-24	NA	45689200	45679512	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45680072_45688375
transcript_9873.nnic	chr1	+	637	3	NNC	ENSG00000277147.7	novel	1064	2	NA	NA	0	-3	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	10.5	52	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTACATTGGTTCTATTATTT	NA	False	NA	14	True	AATAAA	-28	NA	149636488	149647621	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_149636698_149646598_149646786_149647380
transcript_98730.known	chr3	-	4026	10	FSM	ENSG00000163818.19	ENST00000296135.11	4026	10	0	0	0	0	multi-exon	FALSE	canonical	3	35	junction_7	8.73194786861711	180	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAACTTGGAAAATCCTTT	-45840748	True	NA	NA	False	ATTAAA	-25	NA	45842119	45823315	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45837926_45838052_45841988
transcript_98734.known	chr3	-	986	9	FSM	ENSG00000163818.19	ENST00000411866.5	986	9	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_8	14.5322916293336	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGCATTTTGTCATATCCCCT	-45840758	True	NA	NA	False	NA	NA	NA	45842129	45826240	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_45826333_45827355_45827460_45828438_45828616_45830912_45830991_45831072_45831139_45833049_45833122_45834237_45834299_45835589_45835785_45841988
transcript_98738.known	chr3	+	321	3	FSM	ENSG00000288717.1	ENST00000683405.1	321	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGCTGTCAACAGG	45995933	True	NA	NA	False	CATAAA	-25	NA	45995957	46001283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_45996036_46000912_46000956_46001083
transcript_9874.nnic	chr1	+	800	3	NNC	ENSG00000277147.7	novel	1064	2	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	26	233	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATTGGTTCTATTATTTTAT	NA	False	NA	17	True	AATAAA	-31	NA	149636488	149647624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_149636698_149646598_149646946_149647380
transcript_98740.nnic	chr3	+	376	3	NNC	ENSG00000288717.1	novel	321	3	NA	NA	-54	-53	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAATGTTGGCCAGAAAACAG	NA	False	NA	NA	False	AATAAA	-15	NA	45995903	46001230	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_45996090_46000912_46000956_46001083
transcript_98741.nnic	chr3	+	429	3	NNC	ENSG00000288717.1	novel	321	3	NA	NA	-54	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	0	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTTGTTTTGCTGTCAACAGG	NA	False	NA	NA	False	CATAAA	-25	NA	45995903	46001283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_45996090_46000912_46000956_46001083
transcript_98748.known	chr3	-	4890	9	FSM	ENSG00000163827.14	ENST00000395905.8	4890	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_7	5.04820512657717	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGTTCTGGTTCTAAAAGCTT	-46565990	True	NA	NA	False	AATAAA	-19	NA	46566302	46515384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46566176
transcript_98749.known	chr3	-	1963	9	FSM	ENSG00000163827.14	ENST00000296144.3	1963	9	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_8	9.27951372648373	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGGGATTGTGAAAAGAGCAT	NA	False	NA	NA	False	AAAAAG	-16	NA	46580099	46518348	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46519064_46521521_46521659_46527425_46527582_46529904_46530051_46532772_46532910_46539044_46539202_46545045_46545254_46551466_46551611_46579936
transcript_98763.known	chr3	+	1192	6	FSM	ENSG00000241186.10	ENST00000542931.6	1192	6	0	0	0	0	multi-exon	FALSE	canonical	3	149	junction_1	1858.89988971972	53	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTAAATGATTGAATTATAT	46574025	True	NA	NA	False	NA	NA	NA	46574533	46581860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_46574584_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_98774.nnic	chr3	+	951	2	NNC	ENSG00000268324.2	novel	633	3	NA	NA	-11379	-2234	at_least_one_novel_splicesite	FALSE	canonical	3	20	junction_1	0	114	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CACAAAGCCTGTTTGGTGGT	NA	False	NA	6	True	ATTAAA	-15	NA	46546018	46557454	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_46546550_46557034
transcript_98775.known	chr3	+	1956	6	FSM	ENSG00000241186.10	ENST00000296145.6	1956	6	0	0	0	0	multi-exon	FALSE	canonical	3	3615	junction_2	551.942243355226	5893	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CCTAAATGTGAACTGGTTAT	46537381	True	NA	28	True	AGTAAA	-18	NA	46577787	46582457	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_46578005_46579094_46579148_46579231_46579367_46579738_46579854_46579950_46580061_46581131
transcript_98776.known	chr3	-	654	5	FSM	ENSG00000286570.1	ENST00000669501.1	654	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	1.11803398874989	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCACAGAGCCTGTCAGCTTC	NA	False	NA	NA	False	NA	NA	NA	46661507	46647170	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46647273_46649304_46649379_46659034_46659106_46660233_46660277_46661143
transcript_98778.known	chr3	+	1634	4	FSM	ENSG00000181585.7	ENST00000644830.1	1634	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_3	1.88561808316413	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGATTTGTGAATAAAGCTGA	46694472	False	NA	NA	False	NA	NA	NA	46694527	46710853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_46694619_46705789_46705908_46709125_46709276_46709578
transcript_98780.known	chr3	-	885	7	FSM	ENSG00000160808.11	ENST00000292327.6	885	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTATTTCCCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	46863444	46857871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46858102_46858230_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
transcript_98783.known	chr3	-	1012	6	FSM	ENSG00000160808.11	ENST00000395869.5	1012	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0.489897948556636	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTCTGACTTATTTCCCTTC	NA	False	NA	NA	False	AATAAA	-21	NA	46863442	46857871	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46858273_46858383_46858462_46859474_46859649_46860675_46860826_46860959_46860988_46863261
transcript_9879.known	chr1	+	1260	2	FSM	ENSG00000277147.7	ENST00000620190.1	1260	2	0	0	0	0	multi-exon	FALSE	canonical	3	68	junction_1	0	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTTTAAAATTACATTGG	149606526	True	NA	3	True	AATAAA	-17	NA	149607306	149647610	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149607555_149646598
transcript_988.known	chr1	-	1047	4	FSM	ENSG00000175756.14	ENST00000338338.10	753	4	-288	-6	-288	0	multi-exon	FALSE	canonical	3	2275	junction_3	1038.92583416185	9070	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTGCGGGTCTGGAGCTCCA	-1375448	False	NA	-23	True	AATAAA	-22	NA	1375495	1373729	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1373903_1373999_1374446_1374704_1374791_1375153
transcript_98804.known	chr3	-	1017	8	FSM	ENSG00000160799.12	ENST00000292314.6	1017	8	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_7	232.199685351964	4028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGAAATGTGTCAGATATTTC	NA	False	NA	-13	True	AGTAAA	-15	NA	46982010	46921730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46922140_46922235_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976636_46976844_46981931
transcript_98813.known	chr3	-	402	6	FSM	ENSG00000160799.12	ENST00000605358.5	402	6	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_5	260.443928706353	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAGAGATGTGGCCAAGAAG	-46976484	False	7552	NA	False	NA	NA	NA	46976501	46922304	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_46922313_46923328_46923364_46923606_46923669_46925455_46925536_46940997_46941066_46976352
transcript_98822.known	chr3	-	8541	21	FSM	ENSG00000181555.22	ENST00000409792.4	8541	21	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_20	28.4321560912992	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGGCATGTGTGTTCCCTA	-47163203	True	NA	-19	True	AATAAA	-14	NA	47164113	47016435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47017255_47017637_47017740_47019759_47019841_47037665_47037778_47042560_47042701_47046486_47046622_47056820_47057491_47062162_47062347_47067069_47067119_47083719_47084383_47086194_47086315_47088112_47088248_47097954_47098082_47101457_47101556_47103345_47103424_47105996_47106121_47113875_47114005_47116622_47116755_47120181_47124549_47126647_47126664_47163853
transcript_98823.known	chr3	+	4622	10	FSM	ENSG00000114648.12	ENST00000232766.6	4622	10	0	0	0	0	multi-exon	FALSE	canonical	3	56	junction_6	12.3538368109109	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTCTTGTCCTTTCTTGGTT	47281614	True	NA	12	True	AATAAA	-17	NA	47282943	47346816	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47283095_47319652_47319784_47322567_47322709_47329950_47330150_47333156_47333318_47334682_47334820_47336534_47336758_47340571_47340677_47342718_47342831_47343554
transcript_98829.known	chr3	-	640	4	FSM	ENSG00000088727.14	ENST00000425452.1	640	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	44.5495978283381	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAATAAAAGCTCACTCACT	-47282148	False	NA	-28	True	NA	NA	NA	47282198	47275251	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47275491_47277281_47277380_47280951_47281196_47282139
transcript_98837.known	chr3	+	2418	3	FSM	ENSG00000227398.5	ENST00000670818.1	2418	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	7	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCGAGACCCTGTCACAAAA	47163959	True	NA	NA	False	NA	NA	NA	47164185	47177494	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47164598_47169168_47169397_47175716
transcript_98839.known	chr3	+	375	2	FSM	ENSG00000114648.12	ENST00000483201.1	375	2	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_1	0	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGTGTGTGTGTGTGTGTGT	47281629	False	NA	11	True	AGTAAA	-16	NA	47282958	47287458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47283095_47287219
transcript_98841.known	chr3	-	633	3	FSM	ENSG00000088727.14	ENST00000432493.5	633	3	0	0	0	0	multi-exon	FALSE	canonical	3	86	junction_2	5	1044	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-47282457	True	NA	-4	True	AATAAA	-22	NA	47282766	47275227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47275491_47277281_47277380_47282494
transcript_98842.known	chr3	-	740	3	FSM	ENSG00000088727.14	ENST00000425853.5	740	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_2	42.5	117	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTATGTTTGTCTGTCTC	-47282468	False	NA	-4	True	AATAAA	-22	NA	47282518	47275227	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47275491_47277281_47277380_47282139
transcript_98843.known	chr3	-	1911	1	FSM	ENSG00000260236.1	ENST00000568593.1	1911	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	12	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGGAATATTATTCAGCCTTA	-47380773	False	NA	NA	False	AATAAA	-21	NA	47380999	47379088	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47379100_47381000
transcript_9885.known	chr1	+	554	2	ISM	ENSG00000277147.7	ENST00000610297.2	885	3	40505	5	151	-5	3prime_fragment	FALSE	canonical	3	38	junction_1	0	521	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATTACATTGGTTCTATTAT	149646640	False	NA	12	True	AATAAA	-26	NA	149646749	149647619	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_149647065_149647380
transcript_98851.known	chr3	-	4254	23	FSM	ENSG00000114650.21	ENST00000265565.10	4254	23	0	0	0	0	multi-exon	TRUE	canonical	3	47	junction_7	116.378026453976	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTGTGTCTCTTGGAATTGT	-47470263	True	NA	1	True	TTTAAA	-38	NA	47475941	47413680	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47414100_47414179_47414387_47414571_47414653_47414826_47414994_47415097_47415181_47417121_47417208_47417303_47417827_47418133_47418250_47418320_47418523_47418654_47418844_47419327_47419705_47420553_47420773_47420930_47421030_47422441_47422537_47423932_47424046_47425484_47425612_47425996_47426170_47427156_47427263_47427446_47427668_47428512_47428671_47435007_47435138_47442871_47443092_47475798
transcript_98856.nic	chr3	-	1279	2	ISM	ENSG00000114650.21	ENST00000416208.5	1222	7	66	22501	66	-6890	5prime_fragment	FALSE	canonical	3	360	junction_1	0	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	80	AAAAAAAAAAAGAAAGATGA	-47470193	True	NA	NA	False	NA	NA	NA	47475871	47441885	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_47443092_47475798
transcript_9886.known	chr1	+	143	2	FSM	ENSG00000284964.1	ENST00000643225.1	143	2	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_1	0	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTATTTATGGGTGTAGAGTT	149606686	False	NA	NA	False	NA	NA	NA	149607466	149608516	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149607555_149608461
transcript_98868.nic	chr3	-	1392	7	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	7	0	combination_of_known_junctions	FALSE	canonical	3	13	junction_6	98.1048192269654	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513382	False	NA	-1	True	AATAAA	-19	NA	47513406	47495639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_9887.known	chr1	-	469	1	FSM	ENSG00000183598.4	ENST00000331491.2	469	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	16	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GCCGTTTTCATCAAGAGCAG	-149813683	False	NA	NA	False	NA	NA	NA	149813693	149813224	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149813200_149813700
transcript_98870.known	chr3	-	880	7	FSM	ENSG00000163832.16	ENST00000439305.5	880	7	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_6	94.8093115445712	86	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGACGTGGAAGATAGAGCAA	-47513389	False	NA	NA	False	NA	NA	NA	47513413	47496028	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513320
transcript_98876.nic	chr3	-	1262	5	NIC	ENSG00000163832.16	novel	1352	7	NA	NA	-60	0	combination_of_known_junctions	FALSE	canonical	3	15	junction_4	116.974356164076	151	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	NA	False	NA	-1	True	AATAAA	-19	NA	47513772	47495639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47513536
transcript_9888.known	chr1	+	942	2	FSM	ENSG00000270882.3	ENST00000614272.1	942	2	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	0	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	149832669	149834631	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149833115_149834134
transcript_98881.known	chr3	-	557	5	FSM	ENSG00000163832.16	ENST00000414236.5	557	5	0	0	0	0	multi-exon	FALSE	canonical	3	13	junction_4	111.905093717846	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ATGGGGGCGGTGGCTGTGCT	-47513318	False	1465	NA	False	NA	NA	NA	47513342	47501715	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513190
transcript_98882.known	chr3	-	579	5	FSM	ENSG00000163832.16	ENST00000449409.5	579	5	0	0	0	0	multi-exon	FALSE	canonical	1	3	junction_4	116.185196991699	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GAACTAAAGGTACTCATGGA	-47513315	False	1465	NA	False	NA	NA	NA	47513339	47501658	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513222
transcript_98889.known	chr3	-	487	3	FSM	ENSG00000163832.16	ENST00000494161.1	487	3	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_2	140	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTACTCATGGAACTGCCTTC	-47512237	True	NA	NA	False	ACTAAA	-2	NA	47513702	47501649	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47501852_47504329_47504449_47513536
transcript_98891.known	chr3	-	1352	7	FSM	ENSG00000163832.16	ENST00000296149.9	1352	7	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	53.3468732812795	887	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTTCCTGTGGGTTGTCTTG	-47513688	False	NA	-1	True	AATAAA	-19	NA	47513712	47495639	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47510183_47510255_47511147_47511227_47513536
transcript_98892.known	chr3	-	1277	6	FSM	ENSG00000163832.16	ENST00000442215.6	1277	6	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_4	100.633195318443	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTTCCTGTGGGTTGTCTT	-47512244	True	NA	-2	True	AATAAA	-18	NA	47513709	47495640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47496198_47498285_47498433_47501649_47501852_47504329_47504449_47511147_47511227_47513536
transcript_98893.known	chr3	-	2089	4	FSM	ENSG00000114646.10	ENST00000456150.5	2089	4	0	0	0	0	multi-exon	TRUE	canonical	3	12	junction_1	3.29983164553722	97	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTCATTTTCTTAGTCTTTG	-47578122	False	NA	-4	True	AATAAA	-16	NA	47578133	47562238	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47562762_47569151_47569228_47572685_47572875_47576832
transcript_98895.known	chr3	+	3855	22	FSM	ENSG00000132153.15	ENST00000445061.6	3855	22	0	0	0	0	multi-exon	FALSE	canonical	3	182	junction_4	164.989850577697	216	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CCACTGCTGTCCACTAGGGG	47796708	True	NA	21	True	AATAAA	-21	NA	47803137	47850193	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_98897.known	chr3	+	3748	19	FSM	ENSG00000132153.15	ENST00000457607.1	3748	19	0	0	0	0	multi-exon	FALSE	canonical	3	458	junction_1	86.0122730260694	108	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGTGACCACTGCTGTCCAC	47818996	True	NA	15	True	AATAAA	-15	NA	47825027	47850187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47825248_47827346_47827478_47829023_47829135_47840876_47841179_47841616_47841738_47843105_47843256_47845699_47845853_47846164_47847002_47847272_47847349_47847431_47847537_47847780_47847957_47848179_47848387_47848468_47848551_47848623_47848818_47848919_47849080_47849191_47849350_47849450_47849555_47849629_47849770_47849866
transcript_989.known	chr1	-	2815	12	FSM	ENSG00000221978.13	ENST00000481223.6	2815	12	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_6	344.489969147108	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAGCTATGTATGAAAACTC	-1399301	False	14990	-22	True	AATAAA	-20	NA	1399311	1386707	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1391576_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_98903.known	chr3	+	752	6	FSM	ENSG00000132153.15	ENST00000476446.5	752	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	276.496220588998	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTGCATTAGTCCATTTTCAT	47802745	True	NA	NA	False	AATAAA	-18	NA	47802949	47822310	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47818021_47818118_47819235_47819265_47822096
transcript_9891.known	chr1	+	1547	2	FSM	ENSG00000270882.3	ENST00000618193.1	1547	2	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	0	40	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTCAATCTGCTGAGAAATGT	NA	False	NA	NA	False	AATAAA	-28	NA	149832667	149834484	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149833865_149834134
transcript_98916.nnic	chr3	+	604	4	NNC	ENSG00000132153.15	novel	1464	4	NA	NA	-46	-792	at_least_one_novel_splicesite	FALSE	canonical	3	29	junction_2	239.115035077261	227	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CATCTATAATATTATAAGAG	47803049	False	NA	98	True	AATAAA	-16	NA	47803060	47816180	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_47803213_47805325_47805421_47810572_47810712_47815962
transcript_98917.known	chr3	+	1464	4	FSM	ENSG00000132153.15	ENST00000472718.5	1464	4	0	0	0	0	multi-exon	FALSE	canonical	3	377	junction_3	118.852850197208	3021	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGCTTTTTCAGCTCCT	47802898	False	NA	47	True	NA	NA	NA	47802908	47816972	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_47803213_47805325_47805421_47810656_47810712_47815962
transcript_9892.known	chr1	-	549	1	FSM	ENSG00000288825.1	ENST00000369159.3	533	1	14	-30	14	30	mono-exon	FALSE	NA	NA	NA	NA	NA	682	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149842736	149842187	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149842200_149842700
transcript_98923.known	chr3	-	5142	19	FSM	ENSG00000047849.22	ENST00000360240.10	5142	19	0	0	0	0	multi-exon	FALSE	canonical	3	351	junction_6	68.2615928742393	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTCAGGCCGGCACCCACAC	-48088987	True	NA	NA	False	GATAAA	-44	NA	48089272	47851867	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_47853040_47853162_47853353_47855247_47855361_47857430_47857513_47867245_47867339_47869213_47869328_47870812_47871106_47871226_47871287_47871916_47872101_47875684_47875901_47877416_47877524_47914816_47914940_47915950_47917175_47918718_47918842_47921764_47921879_47928227_47928351_47977864_47977934_47998637_47998880_48088772
transcript_9893.known	chr1	+	3612	1	FSM	ENSG00000220323.4	ENST00000608318.2	3612	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	113	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTAATGTCTTTGATTACAAT	NA	False	NA	19	True	AATAAA	-23	NA	149842874	149846486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149842900_149846500
transcript_98931.nnic	chr3	-	614	3	NNC	ENSG00000047849.22	novel	9232	21	NA	NA	-71	-12011	at_least_one_novel_splicesite	FALSE	canonical	2	17	junction_1	197	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATCTCAGAGAATGTGATTA	-48074745	True	NA	NA	False	AATAAA	-20	NA	48088912	47989939	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_47990172_47998637_47998880_48088772
transcript_98932.known	chr3	+	180	1	FSM	ENSG00000231884.1	ENST00000435191.1	180	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	27	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGACTGGCTGAATTATAGAA	NA	False	NA	NA	False	AATAAA	-19	NA	48181546	48181726	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48181500_48181700
transcript_98937.known	chr3	-	613	6	FSM	ENSG00000172113.10	ENST00000425930.5	613	6	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_5	51.9669125501987	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CACTATGTAGCTGGAACAGG	-48299657	True	NA	NA	False	NA	NA	NA	48301353	48294675	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301269
transcript_98938.known	chr3	-	2903	6	FSM	ENSG00000172113.10	ENST00000442597.6	2903	6	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_5	47.1889817648145	46	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GATATCAGTGTGAACTCGTG	-48299671	True	NA	NA	False	AATAAA	-21	NA	48301367	48292316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426_48298524_48301352
transcript_9894.known	chr1	+	564	1	FSM	ENSG00000288859.1	ENST00000607355.3	534	1	0	-30	0	30	mono-exon	FALSE	NA	NA	NA	NA	NA	825	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCCACTCTCAGTCCAGCGTT	NA	False	NA	NA	False	AATAAA	-17	NA	149851060	149851624	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149851100_149851600
transcript_98940.known	chr3	-	794	6	FSM	ENSG00000172113.10	ENST00000418431.5	794	6	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_3	60.8013157752363	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACCACCTGCCTGAGGGCCTA	-48299691	True	NA	NA	False	NA	NA	NA	48301387	48294523	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296237_48296726_48296830_48298426_48298524_48301352
transcript_98946.known	chr3	-	599	5	FSM	ENSG00000172113.10	ENST00000435684.5	599	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GGCCTAGGACCAGCCTGATG	-48299671	True	NA	NA	False	NA	NA	NA	48301367	48294654	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301278
transcript_98947.known	chr3	-	4776	5	FSM	ENSG00000172113.10	ENST00000451657.6	4776	5	0	0	0	0	multi-exon	FALSE	canonical	3	29	junction_4	62.9459093190336	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATGTTATTCTGTTCAATTC	NA	False	NA	NA	False	ATTAAA	-11	NA	48301685	48290721	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296726_48296830_48298426_48298524_48301352
transcript_9895.known	chr1	-	1694	2	FSM	ENSG00000270276.3	ENST00000612061.1	1694	2	0	0	0	0	multi-exon	FALSE	canonical	3	31	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	CTACTGAGATACATAGTAAA	NA	False	NA	NA	False	AATAAA	-20	NA	149861148	149859184	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149859682_149859951
transcript_98952.known	chr3	-	849	4	FSM	ENSG00000172113.10	ENST00000415644.5	849	4	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	69.6387503876653	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AGGCTGAGGCAGGAGAATTG	-48299698	True	NA	NA	False	NA	NA	NA	48301394	48294196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48296726_48296830_48298426_48298524_48301352
transcript_98962.known	chr3	-	866	3	FSM	ENSG00000172113.10	ENST00000444069.5	866	3	0	0	0	0	multi-exon	FALSE	canonical	3	3	junction_2	72.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGGGTGCAGTGAGCCGAGAT	-48299642	True	NA	NA	False	NA	NA	NA	48301338	48294158	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48301278
transcript_98963.known	chr3	-	939	3	FSM	ENSG00000172113.10	ENST00000642710.1	939	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	74	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTTGTCTAATTGACTTGCC	-48299713	True	NA	-105	True	AAAAAG	-3	NA	48301409	48294082	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48301352
transcript_98966.known	chr3	+	593	4	FSM	ENSG00000164048.14	ENST00000412564.5	593	4	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_3	214.233517452335	1197	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATTCATCTTTGTATTCCTA	48224152	True	NA	17	True	AATAAA	-19	NA	48241100	48299253	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48298954
transcript_98967.known	chr3	+	1677	4	FSM	ENSG00000164048.14	ENST00000427617.6	1677	4	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	254.664921459989	365	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TACAGCATGTTTGTAAGATC	48224151	True	NA	NA	False	AATAAA	-26	NA	48241099	48287627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48286245
transcript_98968.known	chr3	+	3367	4	FSM	ENSG00000164048.14	ENST00000354698.8	3367	4	0	0	0	0	multi-exon	FALSE	canonical	3	172	junction_3	224.572680637893	89	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGTGTGTCTGGAGTTTG	48224155	True	NA	25	True	AATGAA	-38	NA	48241103	48270990	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48241215_48247624_48247678_48260812_48260940_48267914
transcript_98969.known	chr3	-	1209	5	FSM	ENSG00000172113.10	ENST00000426689.6	1209	5	0	0	0	0	multi-exon	FALSE	canonical	3	89	junction_3	28.8649874415355	31	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AATCCTTTATGCTGCCACAT	-48298514	False	NA	-19	True	AATAAA	-17	NA	48298524	48293996	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48294804_48295074_48295236_48296118_48296159_48296726_48296830_48298426
transcript_98976.nnic	chr3	+	1703	12	Fusion	ENSG00000164049.14_ENSG00000164048.14	novel	3658	6	NA	NA	-37	0	multi-exon	FALSE	canonical	0	0	junction_3	247.417337393674	11	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGAATGATTATTTTAG	48224114	True	NA	5	True	AGTAAA	-17	NA	48241062	48394725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_48241215_48247624_48247678_48260812_48260940_48373307_48373346_48373547_48373706_48375353_48375473_48378316_48378527_48379399_48379559_48380701_48380913_48381699_48381879_48381954_48382086_48394559
transcript_98979.nnic	chr3	+	1507	10	Fusion	ENSG00000164049.14_ENSG00000164048.14	novel	3658	6	NA	NA	-37	0	multi-exon	FALSE	canonical	0	0	junction_3	266.279209259662	9	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGAATGATTATTTTAG	48224114	True	NA	5	True	AGTAAA	-17	NA	48241062	48394725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_48241215_48247624_48247678_48260812_48260940_48375353_48375473_48378316_48378527_48379399_48379559_48380701_48380913_48381699_48381879_48381954_48382086_48394559
transcript_9898.known	chr1	-	1132	1	FSM	ENSG00000270276.3	ENST00000579512.3	396	1	-51	-685	-51	685	mono-exon	FALSE	NA	NA	NA	NA	NA	129	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GACCTATGAGATAACTGTCT	NA	False	NA	NA	False	AATAAA	-22	NA	149861210	149860078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149860100_149861200
transcript_98980.nnic	chr3	+	1388	9	Fusion	ENSG00000164049.14_ENSG00000164048.14	novel	3658	6	NA	NA	-37	0	multi-exon	FALSE	canonical	0	0	junction_3	277.493581006841	6	NA	NA	FALSE	0	NA	NA	B	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCAGAATGATTATTTTAG	48224114	True	NA	5	True	AGTAAA	-17	NA	48241062	48394725	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_48241215_48247624_48247678_48260812_48260940_48378316_48378527_48379399_48379559_48380701_48380913_48381699_48381879_48381954_48382086_48394559
transcript_98981.known	chr3	-	7178	38	FSM	ENSG00000164050.13	ENST00000296440.11	7178	38	0	0	0	0	multi-exon	TRUE	canonical	3	80	junction_37	84.2259041022461	49	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGTCTGATGTGTGAGCC	-48425134	False	4952	-7	True	ATTAAA	-16	NA	48430086	48403853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48404591_48405723_48405799_48406822_48406899_48407026_48407092_48409328_48409477_48409570_48409732_48409904_48410078_48410295_48410381_48410454_48410559_48410867_48411037_48411862_48412010_48412237_48412305_48412441_48412621_48412741_48412960_48413068_48413170_48413669_48413819_48413894_48414072_48414798_48415042_48415175_48415348_48415582_48415760_48416030_48416168_48416345_48416452_48417910_48418063_48418190_48418364_48418448_48418543_48418916_48419040_48419243_48419367_48419576_48420258_48420664_48420774_48420847_48420957_48421227_48421385_48421673_48421807_48422104_48422206_48422330_48422460_48422764_48422948_48423504_48424618_48425280_48425334_48430007
transcript_98987.known	chr3	-	1461	4	FSM	ENSG00000164051.14	ENST00000447018.5	1461	4	0	0	0	0	multi-exon	TRUE	canonical	3	120	junction_3	75.6615269913757	421	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGAGTTTTTTTCATTAAGAA	-48435129	True	NA	4	True	ATTAAA	-35	NA	48440081	48432163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48439987
transcript_98988.known	chr3	-	1385	4	FSM	ENSG00000164051.14	ENST00000412398.6	1385	4	0	0	0	0	multi-exon	FALSE	canonical	2	15	junction_3	125.158566093842	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCAGACTGAGTTTTTTTCAT	-48435167	True	NA	-2	True	ATTAAA	-29	NA	48440119	48432169	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435016_48440095
transcript_9899.known	chr1	+	1234	1	FSM	ENSG00000264207.1	ENST00000577853.1	1234	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	86	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTTCTGTGCCCTGTTTAATC	NA	False	NA	NA	False	TTTAAA	-5	NA	149861270	149862504	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149861300_149862500
transcript_98991.known	chr3	-	1554	4	FSM	ENSG00000164051.14	ENST00000442740.1	1554	4	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	111.667164177996	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCTGAGTTTTATTATTTAA	-48435148	True	NA	-27	True	ATTAAA	-4	NA	48440100	48432194	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433977_48434816_48435016_48439987
transcript_9900.known	chr1	-	2194	1	FSM	ENSG00000184678.11	ENST00000369155.4	2224	1	30	0	30	0	mono-exon	FALSE	NA	NA	NA	NA	NA	34	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTTTGCTGGATTCTTTTA	-149866280	False	NA	-3	True	AATAAA	-19	NA	149886652	149884458	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149884500_149886700
transcript_99000.known	chr3	+	619	3	FSM	ENSG00000232112.3	ENST00000477624.1	619	3	0	0	0	0	multi-exon	FALSE	canonical	3	17596	junction_1	881	9568	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AAGGATGGCGTTCTTGTGTG	48325366	True	NA	9	True	ATTAAA	-14	NA	48440283	48444203	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48440459_48440540_48440629_48443847
transcript_99001.known	chr3	+	561	4	FSM	ENSG00000232112.3	ENST00000438607.2	561	4	0	0	0	0	multi-exon	FALSE	canonical	3	12791	junction_1	2775.25089956846	58563	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGTTCTTGTGTGGTTGT	48325339	True	NA	14	True	ATTAAA	-19	NA	48440256	48444208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48440313_48440402_48440459_48440540_48440629_48443847
transcript_99002.known	chr3	-	1611	4	FSM	ENSG00000164051.14	ENST00000395694.7	1611	4	0	0	0	0	multi-exon	FALSE	canonical	3	144	junction_3	64.3480121423084	504	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CAATCAGACTGAGTTTTTTT	-48435167	True	NA	-5	True	ATTAAA	-26	NA	48440119	48432172	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48433167_48433706_48433872_48434816_48435137_48439987
transcript_99006.known	chr3	+	1096	2	FSM	ENSG00000213689.14	ENST00000625293.3	1096	2	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_1	0	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	48466176	True	NA	4	True	AATAAA	-19	NA	48466229	48467645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48466310_48466629
transcript_99007.known	chr3	+	629	2	FSM	ENSG00000213689.14	ENST00000456089.1	629	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCACTGAGTGGTCAATTGGC	48466208	True	NA	4	True	AATAAA	-19	NA	48466261	48467645	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48466310_48467064
transcript_99008.known	chr3	+	958	2	FSM	ENSG00000213689.14	ENST00000635452.2	958	2	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	0	1	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCACTGAGTGGTCAATTGG	48466203	True	NA	3	True	AATAAA	-18	NA	48466256	48467644	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48466310_48466739
transcript_9901.known	chr1	+	494	1	FSM	ENSG00000184260.6	ENST00000331380.4	494	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	251	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGTTTTCAAAAAAAGAGCTA	149835639	True	NA	41	True	NA	NA	NA	149886917	149887411	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149886900_149887400
transcript_99012.known	chr3	-	2034	6	FSM	ENSG00000164054.17	ENST00000296444.7	2034	6	0	0	0	0	multi-exon	FALSE	canonical	3	491	junction_4	420.79477183064	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48499896	True	NA	-42	True	AATAAA	-15	NA	48504174	48467875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504018
transcript_99013.known	chr3	-	2250	6	FSM	ENSG00000164054.17	ENST00000442747.5	2250	6	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_5	549.052492936695	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	AGCTGCTGCCCCCTTTCTTC	-48504701	True	NA	-43	True	AATAAA	-14	NA	48504795	48467876	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501136_48501294_48504422
transcript_99014.known	chr3	-	1933	6	FSM	ENSG00000164054.17	ENST00000443308.6	1933	6	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_4	541.912686694084	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGTACACTTGTTTATAATAA	-48499851	True	NA	-77	True	NA	NA	NA	48504129	48467910	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48479176_48479258_48501157_48501294_48504018
transcript_99018.known	chr3	-	1739	4	FSM	ENSG00000164054.17	ENST00000465449.5	1739	4	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_3	649.482015831762	246	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48473480	False	NA	-42	True	AATAAA	-15	NA	48473532	48467875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473433
transcript_99019.known	chr3	-	1839	4	FSM	ENSG00000164054.17	ENST00000426002.5	1839	4	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_3	202.407180373293	1105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48461864	True	NA	-42	True	AATAAA	-15	NA	48473208	48467875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469187_48469360_48469574_48469727_48469844_48473009
transcript_99020.known	chr3	-	1908	3	FSM	ENSG00000164054.17	ENST00000494854.5	1908	3	0	0	0	0	multi-exon	FALSE	canonical	3	992	junction_2	239	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCTGCTGCCCCCTTTCTTCC	-48461759	True	NA	-42	True	AATAAA	-15	NA	48473103	48467875	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48469574_48469727_48469844_48473009
transcript_99024.known	chr3	-	3499	14	FSM	ENSG00000114268.12	ENST00000232375.8	3499	14	0	0	0	0	multi-exon	TRUE	canonical	3	81	junction_11	13.6853915116961	18	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCTCAGGTTGTATTTGGTAG	-48554934	True	NA	-18	True	AATAAA	-18	NA	48556803	48517683	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48519807_48521985_48522051_48523536_48523600_48523700_48523831_48525564_48525670_48535511_48535659_48536255_48536464_48538497_48538620_48539253_48539311_48539696_48539772_48543579_48543647_48549863_48549961_48550117_48550235_48556680
transcript_99036.known	chr3	-	1595	13	FSM	ENSG00000010256.11	ENST00000203407.6	1595	13	0	0	0	0	multi-exon	FALSE	canonical	3	2938	junction_12	226.916452442058	3209	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGTGTCATCCCTCTTTTGG	-48589158	True	NA	-14	True	AATAAA	-16	NA	48609646	48599001	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609551
transcript_99038.known	chr3	-	1387	12	FSM	ENSG00000010256.11	ENST00000415995.5	1387	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_11	1009.10432423515	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCTCCTCTAACCTGTGCCAC	-48589138	True	NA	-66	True	NA	NA	NA	48609626	48599053	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48599193_48599634_48599711_48600062_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609546
transcript_9904.known	chr1	+	891	2	FSM	ENSG00000178096.9	ENST00000369152.6	891	2	0	0	0	0	multi-exon	FALSE	canonical	3	53	junction_1	0	663	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTGTGTTCTTAATGGACT	149899067	True	NA	16	True	ATTAAA	-17	NA	149899567	149900795	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149899673_149900009
transcript_9905.nic	chr1	+	1055	2	ISM	ENSG00000178096.9	ENST00000369153.2	1096	3	11678	-301	0	-3	3prime_fragment	FALSE	canonical	2	5	junction_1	0	133	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGAGGCTGTGTTCTTAATGG	149899067	True	NA	13	True	ATTAAA	-14	NA	149899567	149900792	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr1_+_149899673_149899842
transcript_99056.known	chr3	-	778	6	FSM	ENSG00000010256.11	ENST00000412343.5	778	6	0	0	0	0	multi-exon	FALSE	canonical	3	25	junction_5	1300.02667664937	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGAGTGATGGAATCACTGAA	-48589148	True	NA	NA	False	NA	NA	NA	48609636	48603562	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48603644_48604232_48604432_48604650_48604781_48605769_48605857_48609161_48609303_48609496
transcript_9906.known	chr1	+	811	2	FSM	ENSG00000178096.9	ENST00000369150.1	811	2	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_1	0	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TCCAGGATTTGTAAGGGATG	149899125	True	NA	NA	False	NA	NA	NA	149899625	149900548	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149899731_149899842
transcript_99061.known	chr3	-	622	6	FSM	ENSG00000010256.11	ENST00000460105.1	622	6	0	0	0	0	multi-exon	FALSE	canonical	3	3377	junction_5	122.184450729215	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTCCTGACCTATGGCCGCC	-48603617	False	NA	NA	False	NA	NA	NA	48603644	48600117	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48600152_48600481_48600568_48600679_48600841_48600974_48601119_48601351_48601468_48603563
transcript_99063.known	chr3	-	2630	21	FSM	ENSG00000225697.13	ENST00000420764.6	2630	21	0	0	0	0	multi-exon	FALSE	canonical	1	69	junction_5	53.7580459094264	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632465	True	NA	-5	True	AATAAA	-16	NA	48635483	48625722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627053_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_99067.known	chr3	-	2611	21	FSM	ENSG00000225697.13	ENST00000395550.7	2611	21	0	0	0	0	multi-exon	FALSE	canonical	1	69	junction_5	55.8269424203046	81	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCAGTCTCTGCTGTGGCT	-48632443	True	NA	-5	True	AATAAA	-16	NA	48635461	48625722	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48626001_48626217_48626355_48626630_48626686_48626875_48627056_48627945_48628039_48628433_48628542_48628621_48628715_48629641_48629712_48629871_48629979_48630061_48630158_48630437_48630516_48630606_48630721_48630992_48631141_48631223_48631307_48631648_48631802_48631879_48632045_48632244_48632397_48632973_48633085_48633250_48633391_48633476_48633636_48635370
transcript_9907.known	chr1	+	743	2	FSM	ENSG00000178096.9	ENST00000476344.1	743	2	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	0	61	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGTGTTCTTAATGGACTGCT	149899105	True	NA	19	True	ATTAAA	-20	NA	149899605	149900798	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_149899673_149900122
transcript_99076.known	chr3	-	11933	35	FSM	ENSG00000008300.17	ENST00000164024.5	11933	35	0	0	0	0	multi-exon	TRUE	canonical	3	9	junction_34	17.5383909099251	29	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTGTTGCCTTTTCCTGTTG	-48662222	True	NA	-2	True	AATAAA	-16	NA	48662886	48636462	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48638233_48639673_48640560_48641323_48641525_48641850_48642010_48642357_48642468_48642735_48642885_48642966_48643084_48643553_48643678_48644215_48644296_48644715_48644829_48645034_48645210_48645442_48645650_48645741_48645869_48646089_48646258_48646762_48646929_48647840_48647997_48648265_48648462_48648718_48648929_48649120_48649216_48650479_48650582_48650891_48651076_48651358_48651480_48651576_48651719_48651876_48652049_48652436_48652554_48653001_48653188_48653618_48653789_48653877_48654004_48654288_48654453_48655043_48655202_48655305_48655395_48655735_48655852_48656139_48656366_48656697_48657349_48658886
transcript_99077.nnic	chr3	+	564	4	NNC	ENSG00000228350.1	novel	196	3	NA	NA	-1019	0	at_least_one_novel_splicesite	FALSE	canonical	2	4	junction_2	1.63299316185545	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	48662716	True	NA	NA	False	ATTAAA	-24	NA	48662756	48669174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_48663047_48663697_48663814_48665640_48665723_48669098
transcript_9908.known	chr1	-	497	1	FSM	ENSG00000184270.6	ENST00000331128.6	497	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	4	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAGTGTCAAATGAAGGGCTG	-149867593	True	NA	NA	False	NA	NA	NA	149887965	149887468	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149887500_149888000
transcript_99080.nnic	chr3	+	286	3	NNC	ENSG00000228350.1	novel	196	3	NA	NA	115	0	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	3.5	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	48663858	True	NA	NA	False	ATTAAA	-24	NA	48663890	48669174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_48664019_48665640_48665723_48669098
transcript_99081.known	chr3	+	196	3	FSM	ENSG00000228350.1	ENST00000421275.1	196	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTTTTAGAGATGGGGGTCT	48663732	False	NA	NA	False	ATTAAA	-24	NA	48663775	48669174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48663814_48665640_48665723_48669098
transcript_99082.known	chr3	+	279	1	FSM	ENSG00000271973.1	ENST00000607025.1	279	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	3	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTGTGTGTGAAGCCTATAT	48672422	False	NA	NA	False	AATAAA	-19	NA	48672454	48672733	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48672500_48672700
transcript_9909.known	chr1	-	4378	13	FSM	ENSG00000159164.10	ENST00000369146.8	4378	13	0	0	0	0	multi-exon	FALSE	canonical	3	137	junction_6	18.273196825466	312	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGCTATACCTGCTTCTGTG	-149900983	False	16861	49	True	AATAAA	-28	NA	149917844	149903317	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149905198_149905879_149906040_149906649_149906857_149907699_149907834_149908041_149908207_149909191_149909281_149909460_149909572_149909800_149909891_149910569_149910704_149910825_149910978_149911799_149911981_149913218_149914188_149917738
transcript_99097.nic	chr3	-	1896	6	NIC	ENSG00000068745.15	novel	1746	6	NA	NA	-96	0	combination_of_known_junctions	FALSE	canonical	3	324	junction_5	43.6394317103236	529	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	NA	False	NA	-2	True	AATACA	-20	NA	48717374	48688002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695419_48717156
transcript_99099.known	chr3	-	1746	6	FSM	ENSG00000068745.15	ENST00000328631.10	1746	6	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_5	22.5973449767888	622	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATAGTGCTCCTGTCATTCT	-48702853	True	NA	-2	True	AATACA	-20	NA	48717221	48688002	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48688774_48689537_48689714_48691306_48691483_48692953_48693180_48695089_48695422_48717156
transcript_991.known	chr1	-	1598	12	FSM	ENSG00000221978.13	ENST00000488340.5	1598	12	0	0	0	0	multi-exon	FALSE	canonical	3	244	junction_6	282.157303293133	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGGGGTTGCAGTGACTG	-1399318	False	14990	NA	False	NA	NA	NA	1399328	1387231	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1392789_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_99125.known	chr3	-	792	4	FSM	ENSG00000068745.15	ENST00000413298.5	792	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	94.9888882390403	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACAGCCCCATCCTCAAAG	-48702842	True	NA	NA	False	NA	NA	NA	48717210	48693952	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48695089_48695422_48708119_48708238_48717156
transcript_99129.known	chr3	-	1309	4	FSM	ENSG00000068745.15	ENST00000432678.6	1309	4	0	0	0	0	multi-exon	FALSE	canonical	3	140	junction_1	101.6267681273	401	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AAAAATGTGTCTTGTAATTC	-48717261	False	NA	-5	True	AATAAA	-16	NA	48717278	48693452	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48694458_48694526_48695089_48695422_48717156
transcript_99130.known	chr3	-	1260	4	FSM	ENSG00000068745.15	ENST00000416707.1	1260	4	0	0	0	0	multi-exon	FALSE	canonical	3	60	junction_1	108.894444302728	64	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	ATTACATAAAAATTAATAAA	-48702835	True	NA	-40	True	TATAAA	-34	NA	48717203	48693487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48694693_48694825_48695089_48695419_48717156
transcript_99137.nic	chr3	-	968	4	NIC	ENSG00000068745.15	novel	1309	4	NA	NA	-2	21	combination_of_known_junctions	FALSE	canonical	3	140	junction_1	75.1236018542479	218	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGCCTGGGTGCCTACCCGTG	-48702883	True	NA	50	True	AATAAA	-23	NA	48717251	48693763	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_48694241_48694458_48694526_48695089_48695419_48717156
transcript_99152.known	chr3	-	1185	3	FSM	ENSG00000068745.15	ENST00000340879.8	1185	3	0	0	0	0	multi-exon	FALSE	canonical	3	202	junction_1	92	347	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGTCTTGTAATTCTTTGG	-48702848	True	NA	0	True	AATAAA	-21	NA	48717216	48693447	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48695089_48695422_48717156
transcript_99155.known	chr3	-	2490	9	FSM	ENSG00000068745.15	ENST00000433104.2	2490	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	126.358369331042	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGGAAAAATGTGTCTTGTAA	-48740342	False	NA	-8	True	AATAAA	-13	NA	48740353	48693455	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48694241_48694693_48695422_48717156_48717488_48717869_48717890_48718647_48718758_48729654_48729778_48738881_48738967_48739586_48739747_48740205
transcript_99167.known	chr3	-	1124	2	FSM	ENSG00000068745.15	ENST00000417896.1	1124	2	0	0	0	0	multi-exon	FALSE	canonical	3	324	junction_1	0	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTACTGGGTGCCTTTCTCT	-48702838	True	NA	78	True	NA	NA	NA	48717206	48694344	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48695419_48717156
transcript_99168.known	chr3	-	1673	2	FSM	ENSG00000068745.15	ENST00000449610.5	1673	2	0	0	0	0	multi-exon	FALSE	canonical	3	386	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	ACATATTTTATAAGAACAAA	-48702824	True	NA	29	True	AATAAA	-2	NA	48717192	48693784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48695422_48717156
transcript_99172.known	chr3	-	631	4	FSM	ENSG00000068745.15	ENST00000454335.5	631	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	201.545693743793	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	ATCCATTGAAAGGGGACCAT	-48702820	True	NA	NA	False	NA	NA	NA	48717188	48693122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48693180_48695089_48695419_48715314_48715528_48717156
transcript_99174.known	chr3	-	1778	9	FSM	ENSG00000178537.10	ENST00000319017.5	1778	9	0	0	0	0	multi-exon	FALSE	canonical	3	30	junction_5	3.99804639792987	43	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GCATTGTGTTATATTTTCTT	-48898381	True	NA	-2	True	AATAAA	-25	NA	48898882	48856925	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48857773_48858506_48858632_48859091_48859202_48859554_48859628_48862541_48862660_48879357_48879449_48883996_48884125_48891979_48892073_48898689
transcript_99181.known	chr3	-	1706	12	FSM	ENSG00000178149.17	ENST00000441576.6	1706	12	0	0	0	0	multi-exon	TRUE	canonical	3	39	junction_3	48.4839583251619	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016720	True	NA	-4	True	AATAAA	-21	NA	49018564	49015487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016061_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_99182.known	chr3	-	1748	12	FSM	ENSG00000178149.17	ENST00000341949.9	1748	12	0	0	0	0	multi-exon	FALSE	canonical	3	108	junction_3	34.2593414901519	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTGTCTTGTCATGGGGA	-49016736	True	NA	-4	True	AATAAA	-21	NA	49018580	49015487	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49015708_49015803_49015873_49015972_49016087_49016157_49016341_49016428_49016512_49016611_49016674_49016773_49016848_49017227_49017357_49017433_49017514_49017612_49017870_49018022_49018319_49018399
transcript_99191.known	chr3	+	1771	9	FSM	ENSG00000178467.18	ENST00000383729.9	1771	9	0	0	0	0	multi-exon	FALSE	canonical	1	39	junction_6	26.9278550018378	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTCCGCGATAGGTGCAGCGG	48989723	True	NA	65	True	NA	NA	NA	48990240	49007153	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48990611_48990832_48990915_49001437_49001629_49002499_49002597_49004097_49004261_49004860_49005047_49005776_49005868_49006063_49006188_49006686
transcript_99206.known	chr3	+	4070	6	FSM	ENSG00000178252.19	ENST00000608424.6	4070	6	0	0	0	0	multi-exon	FALSE	canonical	3	527	junction_2	63.5213349985656	620	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGGTTGTCTATGCCTCA	48997492	True	NA	13	True	AATAAA	-18	NA	49007390	49015951	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49007532_49011634_49014117_49014209_49014294_49014382_49014500_49014599_49014719_49014824
transcript_99209.known	chr3	+	3565	5	FSM	ENSG00000178252.19	ENST00000471162.5	3565	5	0	0	0	0	multi-exon	FALSE	canonical	3	528	junction_1	59.7034337370976	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCATGCTCAGCATGCCTTGA	48997504	True	NA	NA	False	NA	NA	NA	49007402	49015365	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49007532_49011634_49014294_49014382_49014500_49014599_49014719_49014824
transcript_99213.known	chr3	+	902	5	FSM	ENSG00000178057.15	ENST00000326925.11	902	5	0	0	0	0	multi-exon	FALSE	canonical	3	660	junction_3	76.0476824104456	1956	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCGCTGATTGTTTTTCTTTT	49017574	True	NA	5	True	NA	NA	NA	49022120	49023495	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49022222_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_99214.known	chr3	+	774	5	FSM	ENSG00000178057.15	ENST00000451378.2	774	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.81984793624	82	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTGTATCAGGTGTGTTGC	49021593	False	NA	20	True	NA	NA	NA	49021604	49023288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49021785_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_99225.nnic	chr3	-	718	2	NNC	ENSG00000235236.1	novel	520	2	NA	NA	-7020	22	at_least_one_novel_splicesite	FALSE	canonical	2	6	junction_1	0	88	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACTGTCTGATGGCCCTTCA	-48990831	True	NA	NA	False	AAAAAG	-33	NA	48991005	48979895	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_48980347_48990738
transcript_99226.known	chr3	-	1042	1	FSM	ENSG00000221883.4	ENST00000647812.1	1042	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	60	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	ACCTGTGCTGGCTGGTCGCT	-48918699	True	NA	NA	False	AATAAA	-35	NA	48918823	48917781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_48917800_48918800
transcript_99227.known	chr3	+	1968	1	FSM	ENSG00000178467.18	ENST00000609406.1	1968	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	2	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TACATTGGTGTGTCAGATGG	48989744	False	NA	NA	False	AATAAA	-17	NA	48990261	48992229	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48990300_48992200
transcript_99228.known	chr3	+	731	3	FSM	ENSG00000177479.20	ENST00000492077.5	731	3	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_2	207.5	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTCTCCTGCCTCAGCCTCC	48909211	True	NA	NA	False	NA	NA	NA	48918831	48925217	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48918999_48922747_48922812_48924717
transcript_99229.known	chr3	+	2278	17	FSM	ENSG00000177479.20	ENST00000449376.5	2278	17	0	0	0	0	multi-exon	FALSE	canonical	3	285	junction_3	120.151060518624	476	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GGCAAACTATAGGATAACAC	48909215	True	NA	-56	True	NA	NA	NA	48918835	48983620	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48918999_48922747_48922812_48924717_48924840_48927461_48927814_48961611_48961680_48964918_48964983_48967124_48967276_48968533_48968656_48970594_48970705_48973698_48973817_48974816_48974868_48974957_48974980_48979481_48979634_48980352_48980497_48981659_48981729_48982895_48982980_48983198
transcript_9923.known	chr1	-	1544	6	FSM	ENSG00000143368.10	ENST00000271628.9	1544	6	0	0	0	0	multi-exon	FALSE	canonical	3	1243	junction_5	153.723908355207	1145	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGTGGTGTTTTCCTTGAC	-149910942	True	NA	-20	True	AATAAA	-18	NA	149927803	149923316	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_149923730_149923840_149924015_149925835_149926043_149926375_149926919_149927165_149927295_149927725
transcript_99230.known	chr3	+	651	3	FSM	ENSG00000178467.18	ENST00000475629.5	651	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	56.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CCTGTGTTTTCTTTTCTTTT	48989820	False	NA	6	True	AATAAA	-16	NA	48990337	48999784	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_48990611_48990832_48990915_48999488
transcript_99231.known	chr3	+	705	5	FSM	ENSG00000178057.15	ENST00000326912.8	705	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	303.81984793624	1240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTTGTATCAGGTGTGTTG	49020447	False	NA	19	True	NA	NA	NA	49020458	49023287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49020571_49022345_49022539_49022701_49022769_49022875_49022977_49023055
transcript_99233.known	chr3	-	1628	14	FSM	ENSG00000178035.13	ENST00000679117.1	1628	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_13	634.43961202133	3777	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028766_49029252
transcript_99235.known	chr3	-	1651	14	FSM	ENSG00000178035.13	ENST00000326739.9	1651	14	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	258.302904614997	9925	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985516	True	NA	32	True	AATAAA	-18	NA	49029398	49024324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_99236.known	chr3	-	1538	13	FSM	ENSG00000178035.13	ENST00000442157.2	1538	13	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_10	655.871996954352	245	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985496	True	NA	14	True	NA	NA	NA	49029378	49024342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028430_49028533_49028757_49028807_49029252
transcript_99237.known	chr3	-	1657	14	FSM	ENSG00000178035.13	ENST00000677010.1	1657	14	0	0	0	0	multi-exon	FALSE	canonical	2	8	junction_12	795.96486794702	186	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985516	True	NA	14	True	NA	NA	NA	49029398	49024342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026598_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028721_49028807_49029252
transcript_99238.known	chr3	-	1749	13	FSM	ENSG00000178035.13	ENST00000472328.2	1749	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	262.938152846296	405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985534	True	NA	32	True	AATAAA	-18	NA	49029416	49024324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_99239.known	chr3	-	1751	15	FSM	ENSG00000178035.13	ENST00000429182.6	1751	15	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_5	777.639760389588	3285	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GTGATGCCTGATCTTTCAAC	-48985544	True	NA	32	True	AATAAA	-18	NA	49029426	49024324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49025994_49026067_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757_49028807_49029252
transcript_99240.known	chr3	-	2758	10	FSM	ENSG00000178035.13	ENST00000677991.1	2758	10	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	294.311164804183	182	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985531	True	NA	14	True	NA	NA	NA	49029413	49024342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709
transcript_99241.known	chr3	-	1881	13	FSM	ENSG00000178035.13	ENST00000676607.1	1881	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	255.778373575423	212	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985539	True	NA	14	True	NA	NA	NA	49029421	49024342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028807_49029252
transcript_99242.known	chr3	-	2078	13	FSM	ENSG00000178035.13	ENST00000678001.1	2078	13	0	0	0	0	multi-exon	FALSE	canonical	3	1427	junction_1	268.83772470065	206	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985515	True	NA	14	True	NA	NA	NA	49029397	49024342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028247_49028323_49028430_49028533_49028757
transcript_99243.known	chr3	-	1704	14	FSM	ENSG00000178035.13	ENST00000677480.1	1704	14	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	635.855524880228	249	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAGTTTAGAAAGAAAAAAGT	-48985538	True	NA	14	True	NA	NA	NA	49029420	49024342	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49024405_49024494_49024579_49024658_49024803_49024895_49025041_49025125_49025270_49026323_49026420_49026518_49026610_49026686_49026887_49026959_49027048_49027709_49027917_49028198_49028323_49028430_49028533_49028757_49028807_49029252
transcript_99245.known	chr3	-	3257	10	FSM	ENSG00000198218.11	ENST00000395443.7	3257	10	0	0	0	0	multi-exon	FALSE	canonical	3	307	junction_9	41.3413970628849	78	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTAGTGAACAACGTCTCT	-49085818	True	NA	-8	True	NA	NA	NA	49094071	49029706	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49030645_49032182_49032274_49032621_49032774_49033119_49033229_49044389_49044505_49046424_49046580_49047068_49047247_49056861_49057891_49076708_49077039_49093911
transcript_99246.known	chr3	-	2171	23	FSM	ENSG00000172053.18	ENST00000636018.1	2171	23	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	260.292302315355	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGAACAGCTAAATTCTCCTA	-49104382	False	NA	-25	True	NA	NA	NA	49104420	49095953	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098975_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372
transcript_99247.known	chr3	-	2449	24	FSM	ENSG00000172053.18	ENST00000306125.12	2449	24	0	0	0	0	multi-exon	FALSE	canonical	3	591	junction_23	102.016122377557	950	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCTGTGTGTTATCTCTGCA	-49090347	True	NA	-3	True	AATAAA	-22	NA	49104757	49095931	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323_49104472_49104616
transcript_99248.known	chr3	-	2362	23	FSM	ENSG00000172053.18	ENST00000464962.6	2362	23	0	0	0	0	multi-exon	FALSE	canonical	3	726	junction_11	87.6464653740354	284	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCTAGAGTCTGTGTGTTAT	-49104494	False	NA	-10	True	AATAAA	-15	NA	49104532	49095938	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104323
transcript_99249.known	chr3	-	2399	24	FSM	ENSG00000172053.18	ENST00000430182.5	2399	24	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_22	199.36867275191	224	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	-49090347	True	NA	-4	True	AATAAA	-21	NA	49104757	49095932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49097991_49098118_49098191_49098259_49098352_49098481_49098599_49098693_49098884_49098990_49099109_49099254_49099343_49099432_49099509_49099648_49099760_49099854_49099960_49100092_49100189_49100299_49100379_49100459_49100574_49100675_49101354_49101442_49101619_49101706_49101827_49101900_49102204_49102266_49102418_49102473_49103344_49103410_49103630_49103707_49103862_49103973_49104372_49104472_49104616
transcript_99250.known	chr3	-	386	3	FSM	ENSG00000172053.18	ENST00000497635.5	386	3	0	0	0	0	multi-exon	FALSE	canonical	3	87	junction_1	427	28	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGTCTGTGTGTTATCTCTGC	-49098486	False	NA	-4	True	AATAAA	-21	NA	49098524	49095932	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49096080_49098191_49098259_49098352
transcript_99253.known	chr3	-	4559	26	FSM	ENSG00000172046.20	ENST00000398888.6	4559	26	0	0	0	0	multi-exon	FALSE	canonical	3	34	junction_21	92.5560068282983	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AATCTCGTCTCTCTGTCTCA	-49116592	True	NA	-3	True	AATAAA	-19	NA	49120938	49108674	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49109186_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115939_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_99254.known	chr3	-	4706	27	FSM	ENSG00000172046.20	ENST00000417901.6	4721	27	15	0	-1	0	multi-exon	FALSE	canonical	3	156	junction_17	57.6146143524562	54	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CTTAGTGACTGTGATCCACC	-49116462	True	NA	-22	True	AATAAA	-16	NA	49120808	49108049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49108529_49110183_49110363_49110443_49110605_49110710_49110864_49110949_49111167_49111254_49111366_49111499_49111814_49111910_49112049_49112283_49112403_49112488_49112630_49113991_49114094_49114173_49114285_49114762_49114874_49114958_49115118_49115227_49115362_49115443_49115640_49115723_49115945_49116046_49116163_49116279_49116352_49116450_49116608_49116726_49116944_49117058_49117362_49117436_49117571_49117656_49117831_49117946_49118121_49119021_49119282_49120755
transcript_99255.nic	chr3	-	1265	6	ISM	ENSG00000172037.14	ENST00000305544.9	5692	32	10018	0	-434	0	3prime_fragment	FALSE	canonical	3	163	junction_5	27.3276416838336	93	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	-49119060	False	NA	-1	True	AATAAA	-17	NA	49123032	49121113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_49121363_49121432_49121593_49121683_49121861_49121943_49122086_49122162_49122371_49122703
transcript_99256.known	chr3	-	689	3	FSM	ENSG00000172037.14	ENST00000467506.5	689	3	0	0	0	0	multi-exon	FALSE	canonical	3	220	junction_1	7.5	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTGTGTTGTCTGGACTCTGA	NA	False	NA	-1	True	AATAAA	-17	NA	49121976	49121113	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49121593_49121683_49121861_49121943
transcript_99257.known	chr3	-	1791	2	FSM	ENSG00000177352.10	ENST00000321895.7	1791	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	34	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCTTCCAGTCTCCCTGCCCA	-49161377	True	NA	NA	False	NA	NA	NA	49166331	49162534	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49164261_49166266
transcript_99258.nic	chr3	+	1680	6	NIC	ENSG00000185909.15	novel	1972	6	NA	NA	-52	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_2	22.4445984593176	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49171115	True	NA	14	True	AGTAAA	-18	NA	49171545	49176486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_49171686_49172635_49172802_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_99261.known	chr3	+	1972	6	FSM	ENSG00000185909.15	ENST00000332780.4	1972	6	0	0	0	0	multi-exon	FALSE	canonical	3	49	junction_2	3.13687742827162	168	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGTGTGGACCCTGGTGTGA	49171167	True	NA	14	True	AGTAAA	-18	NA	49171597	49176486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49171686_49172635_49173146_49174238_49174404_49174741_49174967_49175061_49175164_49175604
transcript_99267.known	chr3	-	4070	22	FSM	ENSG00000114316.13	ENST00000265560.9	4070	22	0	0	0	0	multi-exon	FALSE	canonical	3	129	junction_16	50.3283549369299	85	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCCGGTAGGGCCAGCGGCCT	-49337036	True	NA	NA	False	NA	NA	NA	49340053	49277143	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49311513_49311655_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_99269.known	chr3	-	3222	21	FSM	ENSG00000114316.13	ENST00000351842.8	3222	21	0	0	0	0	multi-exon	FALSE	canonical	3	79	junction_15	52.3656375880214	57	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TATGTGCACTGATATGGGTT	-49337016	True	NA	-38	True	AGTAAA	-17	NA	49340033	49277830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49278452_49278813_49278903_49280743_49280848_49283986_49284137_49284465_49284585_49284848_49284920_49286097_49286326_49292509_49292599_49294406_49294599_49297869_49297965_49298551_49298636_49300466_49300692_49302383_49302543_49305714_49305889_49310619_49310738_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_99276.known	chr3	-	1454	7	FSM	ENSG00000114316.13	ENST00000415188.1	1454	7	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_1	102.988133081222	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CCTTCATCCCAGAACCCAAA	-49337019	True	NA	NA	False	NA	NA	NA	49340036	49316731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49317479_49324701_49324764_49324893_49325040_49325718_49325846_49327685_49327817_49335468_49335597_49339923
transcript_99282.known	chr3	-	3748	3	FSM	ENSG00000188315.8	ENST00000343010.8	3748	3	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_2	4.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TTGATGTCAGTTTCTTAGTT	NA	False	NA	1	True	AATAAA	-18	NA	49277232	49268595	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49271446_49274048_49274141_49276426
transcript_99287.known	chr3	-	899	2	FSM	ENSG00000233276.8	ENST00000419783.3	899	2	0	0	0	0	multi-exon	FALSE	canonical	3	1889	junction_1	0	30424	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGTGTGTATGTCCTGTGTC	-49355743	True	NA	-8	True	AATAAA	-20	NA	49358353	49357175	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357748_49358026
transcript_99292.known	chr3	-	589	2	FSM	ENSG00000233276.8	ENST00000646881.2	589	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	96	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CCCTACGCAGGTACAGCCGC	-49358205	False	NA	NA	False	NA	NA	NA	49358325	49357476	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357767_49358026
transcript_99293.known	chr3	-	580	2	FSM	ENSG00000233276.8	ENST00000496791.2	580	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	71	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCCCTGCCAGCTCCCAGCG	-49358205	False	NA	NA	False	NA	NA	NA	49358325	49357607	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357889_49358026
transcript_99294.known	chr3	-	708	2	FSM	ENSG00000233276.8	ENST00000643797.1	708	2	0	0	0	0	multi-exon	FALSE	canonical	3	101	junction_1	0	351	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	AATAAAGTGCCGGGTGTCAG	-49358205	False	NA	-33	True	NA	NA	NA	49358325	49357200	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357748_49358164
transcript_99295.known	chr3	-	1135	1	FSM	ENSG00000233276.8	ENST00000419349.2	1135	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1112	NA	NA	NA	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AACTGTGTGTATGTCCTGTG	-49358192	False	NA	-10	True	AATAAA	-18	NA	49358312	49357177	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49357200_49358300
transcript_993.known	chr1	-	3112	11	FSM	ENSG00000221978.13	ENST00000400809.8	3112	11	0	0	0	0	multi-exon	FALSE	canonical	3	404	junction_6	241.646870453561	138	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GATTTTATGTTCTCCTAATT	-1399325	False	14990	-1	True	CATAAA	-17	NA	1399335	1385710	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1387583_1387776_1387870_1387953_1388066_1390229_1390372_1390458_1390564_1390765_1390866_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_99301.known	chr3	-	1971	5	FSM	ENSG00000067560.14	ENST00000679208.1	1971	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1190.21951756808	1111	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49411611	False	NA	-10	True	AATAAA	-15	NA	49411645	49359144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411322
transcript_99310.known	chr3	+	2146	3	FSM	ENSG00000145022.5	ENST00000273590.4	1930	3	-217	1	-6	-1	multi-exon	TRUE	canonical	3	38	junction_2	1.5	91	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATCGGTTGTTGTGGTTATTC	49412191	False	NA	3	True	ATTAAA	-12	NA	49412205	49416475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49412641_49413055_49413111_49414819
transcript_99312.known	chr3	-	1805	5	FSM	ENSG00000067560.14	ENST00000418115.6	1805	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1022.40901184409	8507	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTCCTGTATCCTGTTGTTT	-49349833	True	NA	-10	True	AATAAA	-15	NA	49411976	49359144	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_99313.known	chr3	-	1582	3	FSM	ENSG00000067560.14	ENST00000676712.2	1582	3	0	0	0	0	multi-exon	FALSE	canonical	3	717	junction_1	763.5	705	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349857	True	NA	-5	True	AATAAA	-20	NA	49412000	49359139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49375433_49375592_49411819
transcript_99314.known	chr3	-	1641	4	FSM	ENSG00000067560.14	ENST00000454011.7	1641	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1055.2485752445	773	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349785	True	NA	-5	True	AATAAA	-20	NA	49411928	49359139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49375433_49375592_49411819
transcript_99315.known	chr3	-	1944	6	FSM	ENSG00000067560.14	ENST00000422781.6	1944	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	1118.3048958133	679	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTATCCTGTTGTTTGTGTTG	-49349827	True	NA	-4	True	AATAAA	-21	NA	49411970	49359138	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49360927_49361067_49362495_49362627_49368427_49368549_49375433_49375592_49411819
transcript_99316.known	chr3	-	1897	6	FSM	ENSG00000067560.14	ENST00000445425.6	1897	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	1177.91537896404	1129	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTATCCTGTTGTTTGTGTT	-49349825	True	NA	-5	True	AATAAA	-20	NA	49411968	49359139	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49360383_49362495_49362627_49368427_49368549_49375433_49375592_49406711_49406807_49411819
transcript_99320.known	chr3	-	1646	10	FSM	ENSG00000145020.16	ENST00000427987.6	1646	10	0	0	0	0	multi-exon	FALSE	canonical	3	70	junction_1	182.876872833292	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATCTTTGCCCCTGGTATGCA	-49418691	True	NA	-81	True	NA	NA	NA	49422458	49416852	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_99328.known	chr3	-	1610	9	FSM	ENSG00000145020.16	ENST00000635808.1	1610	9	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_7	183.938806060603	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGCATTAATGGACTCCACTG	-49418706	True	NA	-65	True	NA	NA	NA	49422473	49416836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417368_49417614_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103_49422272_49422360
transcript_99330.known	chr3	-	1613	9	FSM	ENSG00000145020.16	ENST00000636978.1	1613	9	0	0	0	0	multi-exon	FALSE	canonical	2	13	junction_1	174.726527393524	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TAGACTCACTCTTCCACATT	-49418687	True	NA	NA	False	NA	NA	NA	49422454	49416993	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417358_49417614_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_99332.known	chr3	-	2260	9	FSM	ENSG00000145020.16	ENST00000635889.1	2260	9	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	230.913268349829	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTTCCACATTCCCAAGTTG	-49418706	True	NA	NA	False	NA	NA	NA	49422473	49416984	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_99334.known	chr3	-	1827	9	FSM	ENSG00000145020.16	ENST00000636070.1	1827	9	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_8	211.352785645233	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	ACTCCACTGAATCCTGAAAA	-49418684	True	NA	-54	True	NA	NA	NA	49422451	49416825	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49421981_49422050_49422360
transcript_99336.known	chr3	-	1914	9	FSM	ENSG00000145020.16	ENST00000636865.1	1914	9	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_4	208.109196096665	290	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGACTCCACTGAATCCTGA	-49418700	True	NA	-57	True	NA	NA	NA	49422467	49416828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419394_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_99346.known	chr3	-	1620	8	FSM	ENSG00000145020.16	ENST00000636522.1	1620	8	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_7	176.340463829699	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ACTCTTCCACATTCCCAAGT	-49418706	True	NA	NA	False	NA	NA	NA	49422473	49416986	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422360
transcript_99349.known	chr3	-	1783	8	FSM	ENSG00000145020.16	ENST00000638063.1	1783	8	0	0	0	0	multi-exon	FALSE	canonical	3	26	junction_6	160.725015514838	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TAGGGCAGGGTGGGCTTCCT	-49418693	True	NA	-126	True	NA	NA	NA	49422460	49416897	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49422103_49422272_49422360
transcript_9935.known	chr1	+	2315	15	FSM	ENSG00000136631.15	ENST00000643970.1	2315	15	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	45.8376126635526	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACCCTTTCTGCTTTTCATTA	150067129	True	NA	NA	False	NA	NA	NA	150067278	150145163	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067607_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_99352.known	chr3	-	2403	8	FSM	ENSG00000145020.16	ENST00000636991.1	2403	8	0	0	0	0	multi-exon	FALSE	canonical	3	354	junction_3	84.732231296055	29	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTTCTTACTTGCCAGTCT	-49418706	True	NA	-22	True	ATTAAA	-3	NA	49422473	49416793	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419259_49419406_49419709_49420343_49421491_49421573_49422103_49422272_49422360
transcript_99353.known	chr3	-	1780	8	FSM	ENSG00000145020.16	ENST00000636023.1	1780	8	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	186.699037523617	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GACTCCACTGAATCCTGAAA	-49418684	True	NA	-55	True	NA	NA	NA	49422451	49416826	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419152_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_99355.known	chr3	-	1991	8	FSM	ENSG00000145020.16	ENST00000637114.1	1991	8	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_7	69.4670675168295	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGGGCTGATCTTTGCCCCT	-49418675	True	NA	-89	True	NA	NA	NA	49422442	49416860	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_99356.known	chr3	-	1823	8	FSM	ENSG00000145020.16	ENST00000637682.1	1823	8	0	0	0	0	multi-exon	TRUE	canonical	2	8	junction_1	181.740339551813	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CAGTCTCTAGCTTCATTGTT	-49418690	True	NA	-8	True	ATTAAA	-17	NA	49422457	49416779	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_99357.known	chr3	-	811	8	FSM	ENSG00000145020.16	ENST00000487589.6	811	8	0	0	0	0	multi-exon	FALSE	canonical	3	40	junction_1	200.894936497175	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	CATCTCAAAAAAAAAAAAAA	-49418610	True	NA	NA	False	NA	NA	NA	49422377	49418207	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49418229_49418970_49419152_49419259_49419406_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422258_49422360
transcript_9937.known	chr1	+	2328	15	FSM	ENSG00000136631.15	ENST00000644510.2	2328	15	0	0	0	0	multi-exon	FALSE	canonical	3	151	junction_4	16.2839911369092	221	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	150066017	True	NA	20	True	AATAAA	-22	NA	150067775	150145329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150144708
transcript_99381.known	chr3	-	1921	7	FSM	ENSG00000145029.14	ENST00000615713.4	1921	7	0	0	0	0	multi-exon	FALSE	non_canonical	0	0	junction_1	9.97914491994847	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATGACTGCTGGCTGCCTGTG	-49427551	True	NA	-4	True	AATAAA	-15	NA	49429288	49422946	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49423506_49424161_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_99382.known	chr3	-	2040	7	FSM	ENSG00000145029.14	ENST00000423832.5	2040	7	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_1	9.97914491994847	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGGGCCTGGTATGCAGT	-49427571	True	NA	-50	True	NA	NA	NA	49429308	49422992	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49423564_49424074_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_99390.known	chr3	-	2768	6	FSM	ENSG00000145020.16	ENST00000635772.1	2768	6	0	0	0	0	multi-exon	FALSE	canonical	3	397	junction_5	71.9155059775011	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	CACTGAATCCTGAAAAAAAA	-49418687	True	NA	-50	True	NA	NA	NA	49422454	49416821	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49420343_49421491_49421573_49422103_49422272_49422360
transcript_994.known	chr1	-	1186	6	FSM	ENSG00000221978.13	ENST00000408918.8	1186	6	0	0	0	0	multi-exon	FALSE	canonical	3	846	junction_1	159.272094228713	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TCTCAAGATTTCATTTGTTT	-1399307	False	14990	-7	True	AATACA	-18	NA	1399317	1392287	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_1392804_1393395_1393461_1395393_1395515_1398232_1398343_1398596_1398672_1399018
transcript_9940.nnic	chr1	+	1845	14	NNC	ENSG00000136631.15	novel	2328	15	NA	NA	-10	1162	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_13	49.8962236656711	23	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TTTTTATAAGAATTACTGAA	150065997	True	NA	NA	False	AATAAA	-21	NA	150067755	150094790	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150094540
transcript_99402.known	chr3	-	3227	6	FSM	ENSG00000145029.14	ENST00000273598.8	3227	6	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_2	4.31740662898458	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTGGGGGAGGGAAGCGGCTG	-49427587	True	NA	NA	False	NA	NA	NA	49429324	49422332	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49424875_49424948_49425054_49425366_49425439_49425882_49425997_49426251_49426429_49429107
transcript_99416.nnic	chr3	-	1275	3	NNC	ENSG00000145029.14	novel	3227	6	NA	NA	-373	1	at_least_one_novel_splicesite	FALSE	canonical	1	1	junction_1	15.5	83	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	NA	False	NA	-3	True	AATAAA	-16	NA	49429699	49422945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49423539_49426338_49426429_49429107
transcript_99417.nnic	chr3	-	866	3	NNC	ENSG00000145029.14	novel	3227	6	NA	NA	-2	1	at_least_one_novel_splicesite	TRUE	non_canonical	0	0	junction_1	16	60	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-49427573	True	NA	-3	True	AATAAA	-16	NA	49429310	49422945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49423539_49426358_49426429_49429107
transcript_99418.nnic	chr3	-	898	3	NNC	ENSG00000145029.14	novel	2040	7	NA	NA	-2	1	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	16	54	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGACTGCTGGCTGCCTGTGT	-49427591	True	NA	-3	True	AATAAA	-16	NA	49429328	49422945	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_-_49423564_49426369_49426429_49429107
transcript_99419.known	chr3	-	2855	7	FSM	ENSG00000145020.16	ENST00000637268.1	2855	7	0	0	0	0	multi-exon	FALSE	canonical	2	23	junction_2	259.989369440795	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTTCCTTCTTACTTGCCA	-49418702	True	NA	-26	True	NA	NA	NA	49422469	49416797	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418166_49418229_49418970_49420343_49421491_49421573_49422103_49422258_49422360
transcript_99420.known	chr3	-	2448	7	FSM	ENSG00000145020.16	ENST00000638092.1	2448	7	0	0	0	0	multi-exon	FALSE	canonical	3	114	junction_6	164.121905911429	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	TCCACTGAATCCTGAAAAAA	-49418687	True	NA	-52	True	NA	NA	NA	49422454	49416823	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49417817_49417974_49418970_49419406_49419709_49420343_49421491_49421573_49422103_49422258_49422360
transcript_99421.known	chr3	-	1509	6	FSM	ENSG00000145020.16	ENST00000636597.1	1509	6	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	213.116869346375	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TTAAACTTCCTTCTTACTTG	-49418724	True	NA	-29	True	NA	NA	NA	49422491	49416800	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49417719_49419709_49419789_49420210_49420343_49421491_49421573_49422103_49422272_49422360
transcript_99423.nic	chr3	+	2153	20	NIC	ENSG00000164062.13	novel	2879	22	NA	NA	-2	0	combination_of_known_junctions	FALSE	canonical	3	18	junction_1	314.331881704602	346	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCCTGGTTCCTGCTGGTACT	49659935	True	NA	25	True	AATAAA	-13	NA	49674348	49683503	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_49674414_49675693_49675788_49675890_49675967_49676055_49676220_49676377_49676516_49676608_49676701_49676776_49676818_49676902_49677025_49677572_49677634_49678851_49678950_49679592_49679645_49680540_49680630_49681100_49681240_49681721_49681806_49681886_49681968_49682347_49682437_49682545_49682737_49682842_49682946_49683039_49683147_49683236
transcript_99435.known	chr3	+	4255	39	FSM	ENSG00000164068.16	ENST00000327697.11	4255	39	0	0	0	0	multi-exon	TRUE	canonical	2	83	junction_10	28.3313887768973	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GCCCTGGCCCTGGCCCTTCT	49686733	True	NA	15	True	ATTAAA	-16	NA	49689556	49721529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49689607_49691129_49691248_49691424_49691510_49697142_49697223_49697362_49697458_49697884_49697940_49698051_49698138_49698439_49698527_49698754_49698823_49698979_49699106_49699467_49699583_49699667_49699773_49700226_49700353_49700471_49700565_49700635_49700710_49701490_49701609_49701810_49701911_49702082_49702145_49702333_49702406_49702632_49702754_49703426_49703529_49704649_49704757_49704983_49705183_49705533_49705680_49705981_49706066_49706790_49706899_49712478_49712657_49713512_49713588_49713737_49713826_49713909_49713998_49714089_49714175_49715574_49715715_49715821_49716011_49716101_49716178_49716392_49716478_49720510_49720654_49720799_49720895_49721019_49721106_49721184
transcript_99436.known	chr3	-	6108	10	FSM	ENSG00000173540.14	ENST00000480687.5	6108	10	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_9	67.2283743741261	229	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCCTTTGCAGACAATGGCG	-49721358	True	NA	-15	True	AATAAA	-23	NA	49723951	49716843	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597_49723732_49723839
transcript_99440.known	chr3	-	3144	9	FSM	ENSG00000173540.14	ENST00000308388.7	3144	9	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	19.5176202442818	525	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACATTCTTCCAGACTCCCC	-49721358	True	NA	-7	True	AATAAA	-19	NA	49723951	49719915	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_99442.known	chr3	-	3217	8	FSM	ENSG00000173540.14	ENST00000308375.10	3217	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_1	18.8289833035376	68	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGCTTGGAGACATTCTTCCA	-49721358	True	NA	-15	True	AATAAA	-11	NA	49723951	49719923	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49722148_49722230_49722359_49722431_49722511_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_99443.known	chr3	-	2919	8	FSM	ENSG00000173540.14	ENST00000678208.1	2919	8	0	0	0	0	multi-exon	FALSE	canonical	3	194	junction_2	20.5277313676412	240	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGTGCCACACAGCCTGTTTT	-49721350	True	NA	NA	False	NA	NA	NA	49723943	49720349	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721964_49722148_49722230_49722359_49722431_49722511_49722595_49723115_49723253_49723303_49723391_49723473_49723597
transcript_99447.known	chr3	-	2510	7	FSM	ENSG00000173540.14	ENST00000677393.1	2510	7	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	111.82873810728	43	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTTTTTTTTTTTTTTTTCTT	-49721358	True	NA	NA	False	NA	NA	NA	49723951	49720334	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49721884_49721972_49722148_49722595_49722755_49722971_49723115_49723253_49723303_49723391_49723473_49723597
transcript_99448.known	chr3	-	2856	1	FSM	ENSG00000176020.9	ENST00000320431.8	2856	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	30	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TGGCGGTCCTCCGTGTGTTC	-49717091	False	2593	0	True	AATAAA	-38	NA	49719684	49716828	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49716800_49719700
transcript_99450.known	chr3	-	1815	6	FSM	ENSG00000176095.12	ENST00000468463.5	1815	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	53.7289493662402	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GCTTTGTGGCTCTGACTGGT	-49781562	True	NA	1	True	TATAAA	-44	NA	49786540	49726912	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49727621_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_99452.known	chr3	-	4471	6	FSM	ENSG00000176095.12	ENST00000321599.9	4471	6	0	0	0	0	multi-exon	FALSE	canonical	3	127	junction_2	15.3805071437843	62	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCGAGTCTGTCTTTGTGAA	-49781564	True	NA	-1	True	AATAAA	-16	NA	49786542	49724293	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49747817_49748169_49786353
transcript_99454.known	chr3	-	4117	5	FSM	ENSG00000176095.12	ENST00000395238.5	4117	5	0	0	0	0	multi-exon	FALSE	canonical	3	28	junction_4	54.6214243680994	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGCGAGTCTGTCTTTGTGA	-49781562	True	NA	-2	True	AATAAA	-15	NA	49786540	49724294	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49727656_49728102_49728279_49732790_49732973_49738211_49738423_49786353
transcript_99457.nic	chr3	-	1307	4	ISM	ENSG00000176095.12	ENST00000468463.5	1815	6	-12	5514	-10	-5018	5prime_fragment	FALSE	canonical	3	130	junction_3	8.98146239020499	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGCTAGTGTGGCTAGTG	-49781574	True	NA	NA	False	ATTAAA	-16	NA	49786552	49732426	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_49732973_49738211_49738423_49747817_49748169_49786353
transcript_99459.known	chr3	+	1033	2	FSM	ENSG00000185614.7	ENST00000333323.6	1033	2	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_1	0	38	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTCCTGGCTCCATACCCCT	49802976	True	NA	NA	False	AATAAA	-17	NA	49803260	49805030	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49803444_49804180
transcript_99460.nic	chr3	-	619	3	ISM	ENSG00000182179.13	ENST00000333486.4	3304	24	7592	0	-71	0	3prime_fragment	FALSE	canonical	2	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GGCATTGCAGAGAGGATGGA	NA	False	NA	-3	True	AATAAA	-16	NA	49806361	49805208	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_-_49805438_49805896_49805998_49806072
transcript_99462.known	chr3	-	2023	15	FSM	ENSG00000183763.9	ENST00000331456.7	2023	15	0	0	0	0	multi-exon	TRUE	canonical	3	106	junction_11	24.1564838974076	223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTCTTCTTCCTGGTTCTGA	-49854279	True	NA	-7	True	AATAAA	-19	NA	49856564	49828600	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49829226_49829457_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49840984_49841073_49841825_49841940_49842452_49842548_49843800_49843929_49844540_49844581_49847524_49847609_49848142_49848201_49856355
transcript_99486.known	chr3	-	1145	9	FSM	ENSG00000183763.9	ENST00000469027.5	1145	9	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	54.5727725152388	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCCATGCCTCTTCCTTGACA	-49854289	True	NA	NA	False	NA	NA	NA	49856574	49829255	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49829509_49829616_49829767_49830019_49830069_49831915_49832069_49839771_49839861_49840283_49840374_49847524_49847609_49848142_49848201_49856355
transcript_99489.known	chr3	-	2905	12	FSM	ENSG00000164076.17	ENST00000488336.5	2905	12	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_6	113.922040909381	190	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862033	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49859677_49859769_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_99492.known	chr3	-	2998	11	FSM	ENSG00000164076.17	ENST00000477224.6	2998	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	112.964109344517	174	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTGGCCACCCTCTCGCCTT	-49862033	True	NA	-15	True	AATAAA	-18	NA	49869906	49857988	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49859882_49860170_49860259_49860470_49860550_49860715_49860853_49860942_49861019_49861179_49861301_49861438_49861578_49861790_49861866_49862044_49862177_49862293_49862403_49869757
transcript_99496.known	chr3	-	2370	6	FSM	ENSG00000164077.15	ENST00000296473.8	2025	6	-334	-11	28	11	multi-exon	FALSE	canonical	3	64	junction_5	4.40908153700972	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	AGCTCTGTCACTTGTCCCTT	NA	False	NA	4	True	ATTAAA	-25	NA	49930145	49908861	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49911525_49912012_49913219_49913360_49929608
transcript_99497.known	chr3	-	1617	5	FSM	ENSG00000164077.15	ENST00000455683.7	1617	5	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_3	24.0572234474388	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GACACTTGTCAAGCTCTGTC	-49929256	False	NA	-7	True	ATTAAA	-14	NA	49929889	49908872	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_49909155_49909252_49909401_49910118_49910885_49913219_49913360_49929608
transcript_99501.known	chr3	+	4010	21	FSM	ENSG00000004534.15	ENST00000443081.5	4010	21	0	0	0	0	multi-exon	FALSE	canonical	3	38	junction_2	221.07606722574	236	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928666	True	NA	9	True	AATAAA	-16	NA	49940040	50077248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49967197_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_99503.known	chr3	+	3630	21	FSM	ENSG00000004534.15	ENST00000266022.9	3630	21	0	0	0	0	multi-exon	FALSE	canonical	3	225	junction_2	204.975608304988	459	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	49928775	True	NA	10	True	AATAAA	-17	NA	49940149	50077249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_49999439_49999514_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_99510.known	chr3	+	2324	19	FSM	ENSG00000004534.15	ENST00000422955.5	2324	19	0	0	0	0	multi-exon	FALSE	canonical	3	24	junction_2	227.791686567214	202	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928727	True	NA	9	True	AATAAA	-16	NA	49940101	50077248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_99521.known	chr3	+	2260	17	FSM	ENSG00000004534.15	ENST00000442092.5	2260	17	0	0	0	0	multi-exon	TRUE	canonical	3	125	junction_2	196.273048009654	527	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	NA	False	NA	10	True	AATAAA	-17	NA	49940006	50077249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_50048244_50048320_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_99530.known	chr3	+	2128	16	FSM	ENSG00000004534.15	ENST00000419610.5	2128	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_2	220.320614862371	192	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTATCTTTTTGTTATTTTT	49928688	True	NA	9	True	AATAAA	-16	NA	49940062	50077248	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_50054334_50054396_50057727_50058004_50058401_50058563_50059648_50059747_50060955_50060999_50061139_50061222_50061461_50061548_50061961_50062109_50065030_50065127_50066241_50066503_50068689_50068765_50070454_50070553_50075200_50075331_50077007
transcript_9954.nnic	chr1	+	947	4	NNC	ENSG00000136631.15	novel	2695	14	NA	NA	0	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_1	77.0757203447796	43	NA	NA	TRUE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	ATATGAGTGATTTAGTTTTA	150066017	True	NA	17	True	AATAAA	-19	NA	150067775	150145326	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr1_+_150067951_150093626_150093649_150110495_150110628_150144708
transcript_99551.known	chr3	+	1886	8	FSM	ENSG00000004534.15	ENST00000425608.5	1886	8	0	0	0	0	multi-exon	FALSE	canonical	3	116	junction_5	117.356425526023	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	GGGAAGAAGGCCAAGAGTCA	49928776	True	NA	NA	False	NA	NA	NA	49940150	50057853	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575_49962686_49967469_49968749_49972058_49972149_49975322_49975393_50048244_50048320_50054334_50054396_50057727
transcript_9956.known	chr1	+	382	2	FSM	ENSG00000136631.15	ENST00000643611.1	382	2	0	0	0	0	multi-exon	FALSE	canonical	3	210	junction_1	0	17	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	150066040	True	NA	NA	False	AATAAA	-16	NA	150067798	150068859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629
transcript_9957.known	chr1	+	468	2	FSM	ENSG00000136631.15	ENST00000478999.1	468	2	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_1	0	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTGTGGCATCATAATTATC	150067219	False	NA	NA	False	AATAAA	-16	NA	150067368	150068859	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067607_150068629
transcript_9958.known	chr1	+	2350	16	FSM	ENSG00000136631.15	ENST00000644526.1	2350	16	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_14	61.8145613913097	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	TGAGTGATTTAGTTTTATTT	150066089	True	NA	20	True	AATAAA	-22	NA	150067847	150145329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150067951_150068629_150068765_150072165_150072227_150076232_150076313_150076915_150076985_150077093_150077232_150077668_150077780_150081341_150081477_150081883_150081998_150082715_150082884_150091936_150092096_150092301_150092410_150093526_150093649_150110495_150110628_150142837_150142932_150144708
transcript_99580.known	chr3	+	581	2	FSM	ENSG00000004534.15	ENST00000493652.1	581	2	0	0	0	0	multi-exon	FALSE	canonical	3	451	junction_1	0	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AGGCGGAGCTTGCAGTGAGC	49928722	True	NA	NA	False	NA	NA	NA	49940096	49963027	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_49940226_49962575
transcript_99581.known	chr3	+	684	5	FSM	ENSG00000004534.15	ENST00000421682.1	684	5	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_3	352.145211525018	78	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTATCTTTTTGTTATTTTTT	50066366	False	NA	10	True	AATAAA	-17	NA	50066391	50077249	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50066503_50068689_50068765_50070454_50070553_50075172_50075331_50077007
transcript_99583.known	chr3	+	3177	25	FSM	ENSG00000003756.17	ENST00000347869.8	3177	25	0	0	0	0	multi-exon	TRUE	canonical	3	151	junction_6	57.0430514806337	164	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	CAAGCCTGGTGATGAAATCA	50085671	True	NA	74	True	NA	NA	NA	50088918	50119021	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50089030_50090381_50090452_50092042_50092209_50093719_50093876_50099981_50100052_50100531_50100606_50103082_50103167_50104247_50104309_50105076_50105143_50105548_50105710_50106766_50106865_50107481_50107570_50108069_50108148_50108231_50108305_50109602_50109689_50110378_50110464_50110678_50110771_50113382_50113545_50113949_50114100_50114179_50114252_50115427_50115608_50115905_50115981_50117073_50117172_50117249_50117380_50118330
transcript_9959.nic	chr1	+	1426	6	NIC	ENSG00000023902.14	novel	1809	5	NA	NA	-250	0	combination_of_known_junctions	FALSE	canonical	3	34	junction_1	90.4897784282844	79	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AACTCATTGCTCTTGCTGAT	150149347	True	NA	7	True	GATAAA	-42	NA	150149665	150159628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150149787_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_99592.nic	chr3	+	743	3	ISM	ENSG00000003756.17	ENST00000492472.1	902	4	-83	1753	-27	-1274	5prime_fragment	TRUE	canonical	3	224	junction_1	3.5	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GAAAAGAAATAATGGCCAGG	50085644	True	NA	NA	False	NA	NA	NA	50088891	50092577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_50089030_50090381_50090452_50092042
transcript_99593.nic	chr3	+	2335	2	ISM	ENSG00000003756.17	ENST00000492472.1	902	4	-83	1752	-27	-1273	intron_retention	FALSE	canonical	3	224	junction_1	0	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AAAAGAAATAATGGCCAGGG	50085644	True	NA	NA	False	AAAAAG	-1	NA	50088891	50092578	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_50089030_50090381
transcript_99595.known	chr3	+	2953	16	FSM	ENSG00000188338.15	ENST00000614032.5	2953	16	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_8	1.72046505340853	3	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGGGTTAGTAGTCCCTGTG	50205166	True	NA	NA	False	AATAAA	-1	NA	50205270	50221486	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50205349_50214148_50214301_50214401_50214484_50214652_50214769_50215385_50215460_50215543_50215637_50215739_50215822_50217237_50217321_50217414_50217474_50217675_50217841_50217916_50217997_50218269_50218371_50218592_50218718_50218803_50218949_50219880_50219985_50220072
transcript_99596.known	chr3	+	2407	9	FSM	ENSG00000114353.17	ENST00000422163.5	2407	9	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_1	392.513833354953	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	75	AAAAAAAAAAAACTGCAAAT	50226093	True	NA	15	True	AGTAAA	-3	NA	50226291	50258898	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50227194_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_99599.known	chr3	+	2219	9	FSM	ENSG00000114353.17	ENST00000313601.11	2219	9	0	0	0	0	multi-exon	FALSE	canonical	3	1078	junction_1	62.4558594128685	352	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGATGGGTATTCTCTCCCA	50219063	True	NA	15	True	AATAAA	-28	NA	50236203	50259362	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50236454_50252099_50252143_50252396_50252539_50253023_50253185_50256191_50256321_50256722_50256853_50256936_50257091_50257499_50257715_50258367
transcript_9960.known	chr1	+	2114	6	FSM	ENSG00000023902.14	ENST00000369124.5	2114	6	0	0	0	0	multi-exon	FALSE	canonical	3	191	junction_1	28.7791591260064	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CACTGGCTTCTCATTCCTAG	150149768	True	NA	4	True	ATTAAA	-16	NA	150149915	150160065	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150150288_150150911_150151059_150156065_150156207_150156910_150157016_150157384_150157487_150158818
transcript_99602.known	chr3	-	338	2	FSM	ENSG00000232352.2	ENST00000421735.2	518	2	170	10	162	-4	multi-exon	FALSE	canonical	0	0	junction_1	0	5	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGGGCTTTGATCCTTCCATC	-50267278	False	NA	NA	False	AATATA	-15	NA	50267371	50266640	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50266888_50267280
transcript_99604.nnic	chr3	-	449	3	Antisense	novelGene_ENSG00000283848.1_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	FALSE	canonical	3	15	junction_2	4	75	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTCCAGGCCCCCTTTTCATT	NA	False	NA	-16	True	AATAAA	-19	NA	50276056	50271956	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr3_-_50272089_50272979_50273214_50275973
transcript_99609.known	chr3	-	1943	12	FSM	ENSG00000214706.12	ENST00000417626.8	1943	12	0	0	0	0	multi-exon	FALSE	canonical	3	736	junction_1	33.6599425955718	600	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCTGGGTATTTTTCTGTT	-50286849	True	NA	-1	True	ATTAAA	-29	NA	50292429	50287731	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50288272_50288408_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_99617.nic	chr3	-	2069	11	NIC	ENSG00000214706.12	novel	1943	12	NA	NA	0	0	intron_retention	FALSE	canonical	3	753	junction_10	30.5980391528608	250	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTGGTCTTAACCCCTGGGT	-50286849	True	NA	-12	True	ATTAAA	-18	NA	50292429	50287742	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_50288505_50288582_50288712_50288799_50288938_50289254_50289361_50289446_50289629_50289711_50289763_50289928_50290087_50290169_50290295_50290387_50290473_50290559_50290680_50292216
transcript_9962.nnic	chr1	-	444	3	Antisense	novelGene_ENSG00000023902.14_AS	novel	NA	NA	NA	NA	NA	NA	multi-exon	TRUE	canonical	0	0	junction_2	0.5	8	NA	NA	TRUE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTAGCCTCACGTCTTCCTTG	NA	False	NA	NA	False	ATTAAA	-44	NA	150166135	150154730	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Antisense_chr1_-_150154968_150155380_150155487_150166034
transcript_99627.known	chr3	-	959	4	FSM	ENSG00000186792.17	ENST00000415204.5	959	4	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_3	14.0079342596338	19	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCTTTGTGCCTACACCTCA	-50298304	True	NA	NA	False	NA	NA	NA	50299401	50292980	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50294854_50299212
transcript_99628.known	chr3	-	1878	4	FSM	ENSG00000186792.17	ENST00000336307.6	1878	4	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_3	8.65383665716478	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCTGAGGTTTGGCTGTTGCT	-50298308	True	NA	-4	True	CATAAA	-18	NA	50299405	50292831	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50293631_50293722_50294708_50295620_50299212
transcript_99629.known	chr3	-	636	3	FSM	ENSG00000186792.17	ENST00000513170.1	636	3	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_2	3	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	-50299134	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50294708_50294854_50299212
transcript_99630.known	chr3	-	1402	3	FSM	ENSG00000186792.17	ENST00000450982.6	1402	3	0	0	0	0	multi-exon	FALSE	canonical	3	11	junction_1	3.5	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTCCATGGCAAGGAAGCAGT	-50299134	False	NA	NA	False	TATAAA	-30	NA	50299232	50293044	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50294708_50295620_50299212
transcript_99631.known	chr3	-	583	3	FSM	ENSG00000243477.6	ENST00000452674.1	583	3	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTGAGCTGACTCTGGATCCT	-50298791	False	NA	NA	False	NA	NA	NA	50298889	50297435	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297673_50297806_50298084_50298820
transcript_99633.known	chr3	-	1330	2	FSM	ENSG00000243477.6	ENST00000354862.4	1330	2	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_1	0	35	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298319	True	NA	-4	True	AATAAA	-15	NA	50299416	50296401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297528_50299212
transcript_99634.known	chr3	-	765	2	FSM	ENSG00000243477.6	ENST00000450489.1	765	2	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	0	6	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GCACCTCCCGCCTGCACTCC	-50299019	False	NA	NA	False	NA	NA	NA	50299117	50297204	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297673_50298820
transcript_99635.known	chr3	-	1464	2	FSM	ENSG00000243477.6	ENST00000443094.3	1464	2	0	0	0	0	multi-exon	FALSE	canonical	3	57	junction_1	0	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TGGCTGTGACAGTTTATTTG	-50298308	True	NA	-4	True	AATAAA	-15	NA	50299405	50296401	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50297673_50299212
transcript_99636.known	chr3	-	1820	2	FSM	ENSG00000243477.6	ENST00000443842.1	1820	2	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_1	0	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GGCTCTGGCTCAGAGCCGTC	-50298303	True	NA	-54	True	NA	NA	NA	50299400	50296451	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50298084_50299212
transcript_99637.known	chr3	-	1635	3	FSM	ENSG00000186792.17	ENST00000359051.7	1635	3	0	0	0	0	multi-exon	FALSE	canonical	2	2	junction_2	4.5	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGAGGTTTGGCTGTTGCTC	-50298761	False	1097	-3	True	CATAAA	-19	NA	50298859	50292830	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50293516_50294708_50295620_50298820
transcript_99638.known	chr3	-	666	4	FSM	ENSG00000114378.17	ENST00000447605.2	666	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.29983164553722	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACACACTGAGTTGCA	-50303475	True	NA	NA	False	NA	NA	NA	50303573	50300481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50300801_50300987_50301078_50302056_50302206_50303465
transcript_99639.known	chr3	-	1084	4	FSM	ENSG00000114378.17	ENST00000457214.6	1084	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	3.68178700572909	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGGCCACACACTGAGTTGCA	-50303475	True	NA	NA	False	NA	NA	NA	50303573	50300481	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50300801_50300987_50301078_50302056_50302624_50303465
transcript_99640.known	chr3	-	2031	4	FSM	ENSG00000114378.17	ENST00000395144.7	2031	4	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	2.05480466765633	4	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTAGCTGTTTACTGAGCGC	-50303476	True	NA	-22	True	AATAAA	-15	NA	50303574	50299892	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50300801_50300987_50301078_50302056_50302981_50303465
transcript_99643.known	chr3	-	2136	4	FSM	ENSG00000068001.14	ENST00000395139.7	2136	4	0	0	0	0	multi-exon	FALSE	canonical	3	469	junction_3	94.9116548281728	126	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTCTGCTTGGATTTTGTA	-50310685	False	NA	-25	True	ATTAAA	-15	NA	50321713	50317808	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50321365
transcript_99644.known	chr3	-	1882	4	FSM	ENSG00000068001.14	ENST00000357750.9	1882	4	0	0	0	0	multi-exon	FALSE	canonical	3	112	junction_3	261.892259441847	189	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTCTGCTTGGATTTTGTAC	-50311717	False	11028	-24	True	ATTAAA	-16	NA	50322745	50317807	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50318540_50318955_50319046_50319568_50320536_50322652
transcript_99645.known	chr3	-	475	3	FSM	ENSG00000114383.10	ENST00000463304.1	475	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	398.5	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GCCCCGGCAAGAAACTCCCA	-50317210	True	NA	-129	True	NA	NA	NA	50328238	50326089	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50326187_50326384_50326478_50327953
transcript_99646.known	chr3	-	1669	3	FSM	ENSG00000114383.10	ENST00000232496.5	1669	3	0	0	0	0	multi-exon	FALSE	canonical	3	797	junction_2	12	160	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CATGAGAGTGGCATCCTGTG	-50317195	True	NA	-4	True	AATAAA	-20	NA	50328223	50324908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50326187_50326356_50326478_50327953
transcript_99650.known	chr3	-	1757	5	FSM	ENSG00000068028.18	ENST00000327761.7	1757	5	0	0	0	0	multi-exon	FALSE	canonical	3	94	junction_1	15.039531242695	167	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TGTTGGAATCTTTTATACAT	-50336265	True	NA	-6	True	AATAAA	-20	NA	50337464	50329781	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337172
transcript_99651.known	chr3	+	790	1	FSM	ENSG00000281358.1	ENST00000629828.1	790	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	32	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTGCGTCTTGCTTTTGTCAC	50337500	False	NA	NA	False	ATTAAA	-18	NA	50337510	50338300	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50337500_50338300
transcript_99652.known	chr3	-	1657	6	FSM	ENSG00000068028.18	ENST00000395126.7	1657	6	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_5	54.3271571131787	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCCTGCTGTTGGAATCTTTT	-50338182	False	NA	-12	True	AATAAA	-14	NA	50338233	50329787	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50330728_50331333_50331450_50331558_50331857_50332049_50332155_50337904_50338012_50338142
transcript_99655.known	chr3	-	1774	12	FSM	ENSG00000004838.14	ENST00000231749.8	1774	12	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_6	1.37870462619119	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CACGGGTATCTCCGCGTGGT	-50345716	False	NA	NA	False	AGTAAA	-16	NA	50345732	50341111	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50341486_50341573_50341700_50341809_50341932_50342014_50342141_50342396_50342570_50342917_50343019_50343117_50343207_50343306_50343445_50343562_50343617_50343733_50343851_50345123_50345233_50345487
transcript_9966.known	chr1	-	2989	7	FSM	ENSG00000143401.15	ENST00000616917.4	2989	7	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_6	424.886030470394	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	60	AAACAAAAAAATTTGCAGTA	-150189036	False	136	-58	True	AATAAA	-21	NA	150234678	150218554	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150234578
transcript_99662.known	chr3	-	1542	11	FSM	ENSG00000114388.14	ENST00000232501.8	1542	11	0	0	0	0	multi-exon	FALSE	canonical	3	186	junction_8	20.8863591848843	128	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCGTCCTGATGCGGTGACTC	-50348001	False	2774	NA	False	AATAAA	-44	NA	50350775	50347329	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349495_50349664_50349834_50349930_50350023_50350574
transcript_99663.known	chr3	-	1905	10	FSM	ENSG00000114388.14	ENST00000479512.5	1905	10	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_9	92.2088343696116	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTTCAAACAGCCTTTATTGA	-50347992	False	2774	-12	True	AATAAA	-9	NA	50350766	50347498	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349491_50349664_50349829_50349932
transcript_99664.known	chr3	-	1371	11	FSM	ENSG00000114388.14	ENST00000667046.1	1371	11	0	0	0	0	multi-exon	FALSE	canonical	3	9	junction_5	87.7049599509629	8	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AGTTCTGTAAATAAAGACAT	-50348052	False	NA	-35	True	NA	NA	NA	50350826	50347521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50347902_50348123_50348242_50348316_50348411_50348526_50348564_50348710_50348783_50348873_50349011_50349385_50349491_50349664_50349834_50349930_50350023_50350574
transcript_99665.known	chr3	-	1747	9	FSM	ENSG00000114388.14	ENST00000451194.5	1747	9	0	0	0	0	multi-exon	FALSE	canonical	3	41	junction_7	65.3432045051358	10	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGCCTTTATTGAGTGCTGTT	-50347980	False	2774	-4	True	AATAAA	-17	NA	50350754	50347490	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50347674_50347758_50348242_50348316_50348411_50348526_50348564_50348684_50348783_50348873_50349011_50349385_50349829_50349930_50350023_50350574
transcript_99674.known	chr3	+	1212	4	FSM	ENSG00000114395.11	ENST00000424512.5	1212	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	203	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	65	AAAAAATTTGTAAAAAATGA	50350080	True	NA	-5	True	AAAAAG	-2	NA	50350844	50354052	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50350989_50351342_50351561_50352008_50352047_50353240
transcript_99676.known	chr3	+	1142	4	FSM	ENSG00000114395.11	ENST00000425346.6	1142	4	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	61.2771481784922	384	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350097	True	NA	12	True	AGTAAA	-15	NA	50350861	50354069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50350985_50351408_50351561_50352008_50352047_50353240
transcript_99682.nic	chr3	+	1142	3	NIC	ENSG00000114395.11	novel	1142	4	NA	NA	-21	0	combination_of_known_junctions	FALSE	canonical	0	0	junction_1	3	42	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TGACTGAAAAGATTGATGGG	50350813	False	NA	12	True	AGTAAA	-15	NA	50350823	50354069	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_50350985_50351408_50351561_50353240
transcript_99683.known	chr3	+	590	3	FSM	ENSG00000271858.5	ENST00000606259.5	590	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	12	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGCTGCTGCGTGATGCCC	50365210	True	NA	NA	False	NA	NA	NA	50365333	50367845	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50365839_50366296_50366332_50367795
transcript_99684.known	chr3	+	1004	3	FSM	ENSG00000271858.5	ENST00000607121.5	1004	3	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_1	2	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50365250	True	NA	8	True	AATAAA	-18	NA	50365373	50368197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50365941_50366296_50366332_50367795
transcript_99685.known	chr3	+	841	2	FSM	ENSG00000114395.11	ENST00000419046.1	841	2	0	0	0	0	multi-exon	FALSE	canonical	3	6	junction_1	0	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	CACAAAGAGCAGCTTGGCAA	50350108	True	NA	NA	False	NA	NA	NA	50350872	50353393	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50351561_50353240
transcript_99686.known	chr3	-	2107	2	FSM	ENSG00000126062.4	ENST00000266025.4	2107	2	0	0	0	0	multi-exon	FALSE	canonical	3	176	junction_1	0	179	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTCCTGGGCTCTTGTCAGGC	-50356747	True	NA	-21	True	AATAAA	-20	NA	50359521	50354749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50355548_50358212
transcript_99687.known	chr3	+	1533	3	FSM	ENSG00000114395.11	ENST00000418577.1	1533	3	0	0	0	0	multi-exon	FALSE	canonical	3	123	junction_2	6.5	41	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	ATTTTAGGAGAGAAAAAAGT	50350093	True	NA	-25	True	NA	NA	NA	50350857	50354032	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50351561_50352008_50352047_50353240
transcript_99688.known	chr3	+	910	3	FSM	ENSG00000271858.5	ENST00000606665.5	910	3	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	4	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGTTGTTGTCTGAGGCATTC	50365261	False	NA	8	True	AATAAA	-18	NA	50365384	50368197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50365858_50366296_50366332_50367795
transcript_99695.known	chr3	+	17064	11	FSM	ENSG00000114735.10	ENST00000434410.5	17064	11	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	20.5769288281804	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CATGTGCATTCCCATTTTGT	50569081	True	NA	NA	False	AATAAA	-15	NA	50569151	50596168	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50569274_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_99700.known	chr3	+	1499	11	FSM	ENSG00000114735.10	ENST00000455834.5	1499	11	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	18.2964477426631	72	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CAAATGGTGACCTAATGTTT	50568970	True	NA	NA	False	AGTAAA	-16	NA	50569492	50580672	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50569546_50570930_50571333_50571709_50571802_50572114_50572209_50577051_50577187_50577508_50577574_50577825_50577876_50578820_50578927_50579843_50579940_50580115_50580230_50580380
transcript_99701.known	chr3	+	2500	11	FSM	ENSG00000114738.11	ENST00000357955.6	2500	11	0	0	0	0	multi-exon	FALSE	canonical	3	223	junction_1	42.8154177837844	73	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	TTCTCTTGGCTCCTGGGTTT	50610944	True	NA	13	True	AATAAA	-16	NA	50617169	50649288	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50617227_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_99703.known	chr3	+	2537	11	FSM	ENSG00000114738.11	ENST00000621469.5	2537	11	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_1	77.7818102129283	76	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TCTTGGCTCCTGGGTTTACT	50610925	True	NA	16	True	AATAAA	-19	NA	50617150	50649291	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_50617242_50617513_50617785_50640365_50640506_50641706_50641772_50642252_50642333_50644408_50644533_50645709_50645786_50646139_50646265_50646739_50646826_50647122_50647204_50647893
transcript_99706.known	chr3	-	2019	3	FSM	ENSG00000114737.16	ENST00000348721.4	2019	3	0	0	0	0	multi-exon	FALSE	canonical	2	3	junction_2	2.5	6	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	CAGAGCCCTCAATGGGGCCG	-50611554	True	NA	-35	True	AATAAA	-18	NA	50611774	50606488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_50608143_50608372_50608594_50611630
transcript_99710.nnic	chr3	+	776	3	Fusion	ENSG00000273356.1_ENSG00000114738.11	novel	1160	10	NA	NA	-11	23	multi-exon	TRUE	canonical	1	3	junction_2	49.5	7	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGATGCTGTCTGCATTTC	50610894	True	NA	NA	False	GATAAA	-35	NA	50617119	50671753	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	Fusion_chr3_+_50617242_50617513_50617785_50671370
transcript_99713.known	chr3	+	846	5	FSM	ENSG00000145050.19	ENST00000446668.5	846	5	0	0	0	0	multi-exon	FALSE	canonical	2	4	junction_2	389.727067959104	7	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTCCTTCTGTTGCTGGTGT	51376069	False	NA	-65	True	NA	NA	NA	51385356	51389262	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51385437_51386207_51386336_51386908_51387047_51387736_51387879_51388904
transcript_99718.known	chr3	+	909	4	FSM	ENSG00000145050.19	ENST00000528157.7	909	4	0	0	0	0	multi-exon	FALSE	canonical	3	748	junction_1	40.3016404408335	2008	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CCAGTTTCTGCTTTCCAGTT	51376003	True	NA	70	True	NA	NA	NA	51385290	51389397	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51385437_51386207_51386336_51387736_51387879_51388904
transcript_99723.known	chr3	+	6624	1	FSM	ENSG00000259956.2	ENST00000563281.2	6624	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	118	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GGCCTTTGATTTGTAATTTC	51384274	True	NA	18	True	AATAAA	-23	NA	51391284	51397908	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51391300_51397900
transcript_99724.known	chr3	+	1488	6	FSM	ENSG00000164081.13	ENST00000611400.4	1488	6	0	0	0	0	multi-exon	FALSE	canonical	2	5	junction_1	73.6059780180931	107	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51672209_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_99733.known	chr3	+	1320	5	FSM	ENSG00000164081.13	ENST00000341333.10	1320	5	0	0	0	0	multi-exon	FALSE	canonical	3	55	junction_1	46.3815696155272	422	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTTGGGTTGTGTATTTGTTT	51669530	True	NA	11	True	AATAAA	-28	NA	51671251	51704323	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_99735.known	chr3	+	1555	5	FSM	ENSG00000164081.13	ENST00000395057.5	1555	5	0	0	0	0	multi-exon	FALSE	canonical	1	4	junction_1	67.3697818016357	94	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GATTTGGGTTGTGTATTTGT	51669552	True	NA	9	True	AATAAA	-26	NA	51671273	51704321	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671548_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_99736.known	chr3	+	2290	5	FSM	ENSG00000164081.13	ENST00000415259.5	2290	5	0	0	0	0	multi-exon	FALSE	canonical	2	10	junction_1	64.8628360465375	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	GACCCAGAATAAAGCCAATG	51669533	True	NA	-29	True	NA	NA	NA	51671254	51704283	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51672302_51674270_51674563_51684412_51684635_51699405_51699575_51703723
transcript_99741.known	chr3	+	1174	4	FSM	ENSG00000164081.13	ENST00000614067.4	1174	4	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_2	69.6770327216142	60	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ATTTGGGTTGTGTATTTGTT	51669453	True	NA	10	True	AATAAA	-27	NA	51671174	51704322	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51674270_51674563_51699405_51699575_51703723
transcript_99743.known	chr3	+	800	4	FSM	ENSG00000164081.13	ENST00000489026.5	800	4	0	0	0	0	multi-exon	FALSE	canonical	3	22	junction_1	69.0619689522067	102	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGCCTGCACCCTCCTGC	51669453	True	NA	NA	False	NA	NA	NA	51671174	51704018	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51671289_51684412_51684635_51699405_51699575_51703723
transcript_99746.known	chr3	+	1910	4	FSM	ENSG00000164082.15	ENST00000475478.5	1910	4	0	0	0	0	multi-exon	FALSE	canonical	2	6	junction_1	11.115554667022	8	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCACTCTTTGCCTTTGACCC	51706882	True	NA	48	True	AATAAA	-20	NA	51707089	51718613	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51707168_51715061_51716138_51717636_51717818_51718038
transcript_99748.known	chr3	-	1542	15	FSM	ENSG00000114767.7	ENST00000232888.7	1542	15	0	0	0	0	multi-exon	FALSE	canonical	3	408	junction_14	24.7146985927527	1834	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CTTGTTTCTTGTAGCTTCTT	-51934951	True	NA	-6	True	ATTAAA	-18	NA	51941904	51933428	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51933600_51933707_51933782_51934471_51934552_51934630_51934777_51935196_51935260_51935341_51935477_51935591_51935693_51936256_51936350_51936430_51936556_51937191_51937319_51937544_51937587_51937668_51937737_51938094_51938205_51941408_51941492_51941780
transcript_99749.known	chr3	+	2472	12	FSM	ENSG00000041880.15	ENST00000417220.6	2472	12	0	0	0	0	multi-exon	TRUE	canonical	1	2	junction_1	3.12811827892459	2	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	25	TTTAAGGCTGAATGGTACTC	51942251	True	NA	8	True	CATAAA	-20	NA	51942344	51948862	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51942709_51942929_51943047_51943348_51943539_51944088_51944218_51944389_51944579_51944777_51944911_51944997_51945225_51945494_51945645_51945852_51945940_51946165_51946344_51947739_51947896_51948310
transcript_99756.known	chr3	+	1422	15	FSM	ENSG00000243989.9	ENST00000636358.2	1422	15	0	0	0	0	multi-exon	FALSE	canonical	3	296	junction_6	28.5500813108675	793	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51981564	True	NA	38	True	AATAAA	-38	NA	51983534	51989197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_99768.known	chr3	+	1457	14	FSM	ENSG00000243989.9	ENST00000636880.1	1457	14	0	0	0	0	multi-exon	FALSE	canonical	2	7	junction_2	95.9915553485037	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983263	False	NA	38	True	AATAAA	-38	NA	51983434	51989197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_99769.known	chr3	+	1409	14	FSM	ENSG00000243989.9	ENST00000476351.5	1409	14	0	0	0	0	multi-exon	FALSE	canonical	2	11	junction_2	94.9762349595971	70	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983271	False	NA	38	True	AATAAA	-38	NA	51983442	51989197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985400_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987146_51987197_51987308_51987454_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_99771.known	chr3	+	1319	13	FSM	ENSG00000243989.9	ENST00000476854.5	1319	13	0	0	0	0	multi-exon	FALSE	canonical	3	12	junction_9	98.4954525177009	75	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	GGACACTCGTGGAGCAAGAA	51983271	False	NA	38	True	AATAAA	-38	NA	51983442	51989197	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046_51984159_51985206_51985272_51985360_51985466_51985851_51985947_51986254_51986332_51986414_51986505_51986604_51986662_51986987_51987062_51987555_51987625_51988523_51988604_51988765_51988827_51988910
transcript_99784.known	chr3	+	1066	5	FSM	ENSG00000248487.10	ENST00000273596.8	1066	5	0	0	0	0	multi-exon	FALSE	canonical	3	50	junction_3	5.78791845139511	28	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTGACAGGTTCCGTTTCCTG	51974600	True	NA	10	True	AATAAA	-26	NA	51975063	51981196	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51975205_51977870_51978083_51978258_51978375_51980392_51980629_51980835
transcript_99786.known	chr3	-	980	5	FSM	ENSG00000114779.20	ENST00000525795.1	980	5	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_3	22.2317340754157	5	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TCTACCTCTTTCTCTTGCAG	-51973074	True	NA	NA	False	NA	NA	NA	51974049	51969272	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51971811_51971893_51973964
transcript_9979.known	chr1	-	3407	7	FSM	ENSG00000143401.15	ENST00000583931.6	3407	7	0	0	0	0	multi-exon	TRUE	canonical	3	1080	junction_5	36.8947451844056	1223	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTTTCAGTGTATAGCATTCA	-150190470	True	NA	-2	True	AATAAA	-24	NA	150236112	150218416	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229238_150230570_150230694_150231776_150231927_150235732
transcript_99791.known	chr3	-	1657	4	FSM	ENSG00000114779.20	ENST00000361143.10	1657	4	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_3	7.78888096369861	87	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	CCCCACCGGCTCCTGCTTCT	-51973074	True	NA	-4	True	AATAAA	-15	NA	51974049	51968514	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971699_51973964
transcript_99792.known	chr3	-	1818	4	FSM	ENSG00000114779.20	ENST00000395008.6	1818	4	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_3	18.624953392932	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	AGTGATGCAATTAGACCCCA	-51973056	True	NA	-19	True	NA	NA	NA	51974031	51968529	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51971459_51971893_51973964
transcript_99794.known	chr3	-	1998	3	FSM	ENSG00000114779.20	ENST00000487005.1	1998	3	0	0	0	0	multi-exon	FALSE	canonical	1	5	junction_2	22	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	ACCCCACCGGCTCCTGCTTC	-51974620	False	NA	-5	True	AATAAA	-14	NA	51974630	51968515	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51969606_51969942_51970185_51973964
transcript_99795.known	chr3	-	1397	3	FSM	ENSG00000114779.20	ENST00000461108.5	1397	3	0	0	0	0	multi-exon	FALSE	canonical	3	32	junction_2	8	2	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CTGCAAATGCCCTGAAGGCC	-51973046	True	NA	NA	False	NA	NA	NA	51974021	51969083	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51970185_51971459_51971699_51973964
transcript_99796.known	chr3	+	781	2	FSM	ENSG00000243989.9	ENST00000496679.2	781	2	0	0	0	0	multi-exon	FALSE	canonical	3	361	junction_1	0	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GTTGAGGCTGGCAGATTGCT	51983168	False	NA	NA	False	NA	NA	NA	51983339	51984577	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51983590_51984046
transcript_99797.known	chr3	+	456	3	FSM	ENSG00000243989.9	ENST00000638077.1	456	3	0	0	0	0	multi-exon	FALSE	canonical	3	352	junction_2	30	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CTGTCTCTGAAGTACTAACA	51988461	False	NA	15	True	AATAAA	-15	NA	51988472	51989174	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_51988604_51988765_51988827_51988910
transcript_9980.known	chr1	-	616	3	FSM	ENSG00000143401.15	ENST00000534437.1	616	3	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_2	555	55	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	CACAGGTGTAGTATGGTGCA	-150181088	False	45642	-9	True	ATTAAA	-16	NA	150226730	150220377	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223295_150226607
transcript_99809.known	chr3	-	910	4	FSM	ENSG00000162244.12	ENST00000648640.1	910	4	0	0	0	0	multi-exon	FALSE	canonical	2	52	junction_3	3844.51265514311	12105	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	ATGGGGCCCTGAAGTGCAAG	-51844032	True	NA	76	True	NA	NA	NA	51995857	51993521	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995662
transcript_9981.known	chr1	-	3054	5	FSM	ENSG00000143401.15	ENST00000629042.2	3054	5	0	0	0	0	multi-exon	FALSE	canonical	2	25	junction_4	484.378209666785	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	AGTTTCAGTGTATAGCATTC	-150190514	True	NA	-3	True	AATAAA	-23	NA	150236156	150218417	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220762_150223185_150223241_150226607_150226796_150229071_150229115_150235732
transcript_99810.known	chr3	-	537	4	FSM	ENSG00000162244.12	ENST00000492277.5	537	4	0	0	0	0	multi-exon	FALSE	canonical	3	15	junction_3	3861.92813098443	278	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	GATATCTCTGCCAACATGAG	-51843989	False	NA	NA	False	NA	NA	NA	51995814	51993749	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995764
transcript_99817.known	chr3	-	713	4	FSM	ENSG00000162244.12	ENST00000495383.5	713	4	0	0	0	0	multi-exon	FALSE	canonical	3	173	junction_3	3787.56104461257	10798	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	-51844019	True	NA	-31	True	AATAAA	-12	NA	51995844	51993628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995739
transcript_99818.known	chr3	-	719	5	FSM	ENSG00000162244.12	ENST00000480306.5	719	5	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_2	3296.45464855805	1655	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTGTTAGCCTCTGTCTATG	-51844056	True	NA	-30	True	AATAAA	-13	NA	51995881	51993627	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51994772_51994858_51995041_51995107_51995424_51995470_51995856
transcript_99819.known	chr3	-	670	4	FSM	ENSG00000162244.12	ENST00000479017.5	670	4	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_3	3863.34020706895	7028	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ATTTGTTAGCCTCTGTCTAT	-51844005	False	NA	-31	True	AATAAA	-12	NA	51995830	51993628	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_51994127_51995041_51995107_51995424_51995470_51995768
transcript_9982.known	chr1	-	1048	5	FSM	ENSG00000143401.15	ENST00000369114.9	1048	5	0	0	0	0	multi-exon	TRUE	canonical	0	0	junction_2	532.556569765128	27	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	CATGATCACTTTTACACAGG	-150190443	True	NA	-23	True	ATTAAA	-2	NA	150236085	150220391	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_-_150220759_150223185_150223241_150230570_150230694_150231776_150231927_150235732
transcript_99823.known	chr3	-	1936	11	FSM	ENSG00000164087.8	ENST00000296484.7	1936	11	0	0	0	0	multi-exon	FALSE	canonical	3	113	junction_2	36.6	210	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGACACTTAATCAATCTTCC	-52152562	True	NA	8	True	ATTAAA	-43	NA	52154423	52075225	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_99824.known	chr3	-	1760	11	FSM	ENSG00000164087.8	ENST00000474012.1	1760	11	0	0	0	0	multi-exon	FALSE	canonical	3	19	junction_10	65.158575797818	14	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CGGGGGTTTTCTCTAAATCT	-52152543	True	NA	NA	False	NA	NA	NA	52154404	52075453	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52075986_52096568_52096713_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151172_52154354
transcript_9983.known	chr1	+	1531	12	FSM	ENSG00000118298.12	ENST00000647854.1	1531	12	0	0	0	0	multi-exon	TRUE	canonical	1	3	junction_1	114.011381192065	20	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TATTTGGAAATTAAAGTTTC	150257228	True	NA	-14	True	GATAAA	-36	NA	150257250	150265049	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150257329_150258079_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_99834.known	chr3	-	1999	10	FSM	ENSG00000164087.8	ENST00000394970.6	1999	10	0	0	0	0	multi-exon	FALSE	canonical	3	80	junction_1	45.8728785629845	58	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	AGGAATCTCAAAATTAAACC	-52154463	False	NA	-52	True	NA	NA	NA	52154690	52075285	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52075986_52122378_52122478_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_99842.nnic	chr3	-	1684	9	NIC	ENSG00000164087.8	novel	1999	10	NA	NA	-18	-27	combination_of_known_splicesites	FALSE	canonical	1	7	junction_1	70.7031647099336	66	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTTGTTGCAGGAGTGGCTTA	-52154214	False	NA	-19	True	ATTAAA	-16	NA	52154441	52075252	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_-_52075986_52125112_52125182_52138168_52138303_52145845_52145962_52146987_52147096_52149209_52149390_52149815_52149988_52151015_52151101_52154354
transcript_9986.known	chr1	+	1788	11	FSM	ENSG00000118298.12	ENST00000369111.9	1788	11	0	0	0	0	multi-exon	FALSE	canonical	3	280	junction_8	55.9486371594519	494	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150255337	True	NA	15	True	ATTAAA	-15	NA	150257773	150265078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150263793_150263879_150264592
transcript_99864.known	chr3	+	2375	12	FSM	ENSG00000023330.15	ENST00000484952.6	2375	12	0	0	0	0	multi-exon	FALSE	canonical	3	78	junction_2	100.185695354771	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GTTCTTTCTGCTATTGGCTA	52196164	True	NA	33	True	AATAAA	-18	NA	52198159	52214327	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52198256_52198671_52198849_52199209_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_99865.known	chr3	+	2212	11	FSM	ENSG00000023330.15	ENST00000310271.6	2212	11	0	0	0	0	multi-exon	FALSE	canonical	3	16	junction_1	97.6280697340678	201	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GTGGTTCTTTCTGCTATTGG	52196136	True	NA	30	True	AATAAA	-15	NA	52198131	52214324	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52198256_52199220_52199441_52202506_52202735_52203862_52204013_52204692_52204916_52205838_52206024_52206571_52206752_52208082_52208248_52211282_52211552_52212257_52212421_52214019
transcript_9987.nic	chr1	+	2062	11	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	246	0	combination_of_known_junctions	FALSE	canonical	3	127	junction_8	86.5225982041686	310	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150257474	False	NA	15	True	ATTAAA	-15	NA	150257496	150265078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263661_150263680_150263793_150263879_150264592
transcript_99872.known	chr3	+	1790	9	FSM	ENSG00000164088.18	ENST00000409502.7	1790	9	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_1	9.11643433585741	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GAGCCTTGTGAGTCATGAAT	52245979	False	NA	9	True	ATTAAA	-15	NA	52246208	52250597	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52246315_52246694_52246813_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_99873.known	chr3	+	2231	10	FSM	ENSG00000164088.18	ENST00000323588.9	2231	10	0	0	0	0	multi-exon	FALSE	canonical	3	10	junction_5	5.59761854124889	9	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	GCCTTGTGAGTCATGAATTG	52245529	True	NA	11	True	ATTAAA	-17	NA	52245758	52250599	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52246049_52246694_52246813_52246973_52247229_52247681_52247795_52248152_52248238_52248334_52248454_52248636_52248701_52248955_52249064_52249173_52249323_52249669
transcript_99874.known	chr3	-	1558	9	FSM	ENSG00000247596.10	ENST00000678549.1	1558	9	0	0	0	0	multi-exon	FALSE	canonical	1	2	junction_7	155.092663833593	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-52234980	True	NA	6	True	NA	NA	NA	52239149	52228632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232097_52235028_52235107_52238991
transcript_99875.known	chr3	-	1579	9	FSM	ENSG00000247596.10	ENST00000676989.1	1579	9	0	0	0	0	multi-exon	FALSE	canonical	2	9	junction_7	152.787434038274	243	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	55	AATAAAATATTTTTAAATCA	-52234980	True	NA	6	True	NA	NA	NA	52239149	52228632	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232118_52235028_52235107_52238991
transcript_99877.known	chr3	+	1056	2	FSM	ENSG00000243224.1	ENST00000464958.1	1056	2	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_1	0	4	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GATGCTTTGTGTTGTATACT	52239062	False	NA	NA	False	AATGAA	-7	NA	52239299	52241097	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52239436_52240177
transcript_99879.known	chr3	-	1426	8	FSM	ENSG00000247596.10	ENST00000678838.1	1426	8	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_6	164.687335175923	187	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-52234980	True	NA	-21	True	AATAAA	-16	NA	52239149	52228611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52235028_52235107_52238991
transcript_99880.known	chr3	-	1531	8	FSM	ENSG00000247596.10	ENST00000678352.1	1531	8	0	0	0	0	multi-exon	FALSE	canonical	3	438	junction_1	14.5882256128226	211	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	GACTTGTGCTTGGCCCTGAG	-52231021	False	4169	-21	True	AATAAA	-16	NA	52235190	52228611	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52229202_52229660_52229783_52229919_52230071_52230869_52230996_52231126_52231232_52231443_52231540_52231943_52232123_52235028
transcript_99881.known	chr3	-	4286	9	FSM	ENSG00000164091.12	ENST00000296490.8	4286	9	0	0	0	0	multi-exon	FALSE	canonical	3	97	junction_4	12.507497751349	139	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTTTATGGCTGCAGCCTCTT	-52273991	True	NA	-22	True	TATAAA	-32	NA	52278649	52254433	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52257520_52258535_52258679_52259196_52259267_52259716_52259873_52260384_52260502_52261379_52261480_52266951_52267019_52270711_52270810_52278200
transcript_99882.nnic	chr3	+	1471	7	NNC	ENSG00000168237.18	novel	992	6	NA	NA	-15	0	at_least_one_novel_splicesite	FALSE	canonical	0	0	junction_3	6.84957419601151	16	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287105	True	NA	12	True	AATAAA	-14	NA	52287804	52293471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NNC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291713_52291923_52292259_52292570_52293045_52293193_52293306
transcript_99883.nic	chr3	+	1438	7	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-15	0	combination_of_known_junctions	FALSE	canonical	3	7	junction_2	5.4594464513864	45	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287105	True	NA	12	True	AATAAA	-14	NA	52287804	52293471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_99887.known	chr3	+	992	6	FSM	ENSG00000168237.18	ENST00000471180.5	992	6	0	0	0	0	multi-exon	FALSE	canonical	3	8	junction_5	5.2687759489278	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287135	True	NA	12	True	AATAAA	-14	NA	52287834	52293471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259_52292570_52293045_52293193_52293306
transcript_99894.known	chr3	+	3791	5	FSM	ENSG00000168237.18	ENST00000436784.7	3791	5	0	0	0	0	multi-exon	FALSE	canonical	3	7	junction_2	6.17960354715414	18	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	GTGCCCGTCCCTTGCTCTTG	52287128	True	NA	12	True	CATAAA	-22	NA	52287827	52295257	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52291746_52291923_52292259
transcript_99895.known	chr3	+	935	5	FSM	ENSG00000168237.18	ENST00000473032.5	935	5	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.11247489949718	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGGGTTCTCAGTGCGCCT	52287120	True	NA	10	True	AATAAA	-12	NA	52287819	52293469	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52293045_52293193_52293306
transcript_99899.nic	chr3	+	1620	4	ISM	ENSG00000168237.18	ENST00000471180.5	992	6	-34	-4	-19	0	intron_retention	TRUE	canonical	3	11	junction_1	5.09901951359278	24	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TTCTCAGTGCGCCTTCCCTC	52287101	True	NA	16	True	AATAAA	-18	NA	52287800	52293475	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_52287877_52290959_52291112_52291746_52291923_52292259
transcript_99901.nic	chr3	+	540	4	NIC	ENSG00000168237.18	novel	992	6	NA	NA	-19	0	combination_of_known_junctions	FALSE	canonical	1	1	junction_2	4.18993502999218	15	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGGGTTCTCAGTGCGCCTTC	52287101	True	NA	12	True	AATAAA	-14	NA	52287800	52293471	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290959_52291112_52293045_52293193_52293306
transcript_99903.known	chr3	+	1371	4	FSM	ENSG00000168237.18	ENST00000305690.12	1371	4	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_3	3.39934634239519	3	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	AGCCCACAATGACTCACATA	52287120	True	NA	NA	False	NA	NA	NA	52287819	52293005	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52287877_52290303_52290720_52290959_52291112_52292259
transcript_99907.nic	chr3	+	1442	3	NIC	ENSG00000168237.18	novel	2019	5	NA	NA	-19	-2	intron_retention	FALSE	canonical	1	1	junction_2	5	13	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTTCTCAGTGCGCCTTCCC	52287101	True	NA	14	True	AATAAA	-16	NA	52287800	52293473	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr3_+_52287877_52290959_52291112_52292259
transcript_99912.known	chr3	-	3434	17	FSM	ENSG00000163930.10	ENST00000296288.9	3434	17	0	0	0	0	multi-exon	TRUE	canonical	3	28	junction_9	72.9777095677166	26	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	40	TAAGAATCTCCTGAGAAATG	-52409894	False	NA	-2	True	AATAAA	-8	NA	52409914	52401025	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406323_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_99913.known	chr3	-	3600	17	FSM	ENSG00000163930.10	ENST00000460680.6	3600	17	0	0	0	0	multi-exon	TRUE	canonical	3	221	junction_9	39.4966375151101	74	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGAACCCTCCTGTGGTTGCT	-52406407	True	NA	16	True	AATAAA	-26	NA	52410008	52401007	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52402422_52402601_52402675_52402778_52402872_52403137_52403299_52403415_52403895_52404452_52404587_52405109_52405295_52405764_52405913_52406252_52406377_52406828_52406908_52407173_52407317_52407398_52407461_52407957_52408078_52408473_52408607_52409553_52409609_52409713_52409744_52409841
transcript_99920.known	chr3	+	576	5	FSM	ENSG00000010318.22	ENST00000482327.5	576	5	0	0	0	0	multi-exon	FALSE	canonical	3	21	junction_4	9.90896059130321	1	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	90	AAAAAATTAAAAAAAAAAAA	52409643	False	NA	NA	False	NA	NA	NA	52411035	52414836	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52411248_52412810_52412921_52413995_52414049_52414495_52414588_52414727
transcript_99921.known	chr3	-	687	6	FSM	ENSG00000114854.8	ENST00000232975.8	687	6	0	0	0	0	multi-exon	FALSE	canonical	3	27	junction_2	4.84148737476408	375	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	5	GGTCTGCTATCTGGCTCTGG	-52453705	True	NA	-3	True	AATAAA	-15	NA	52454041	52451099	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52451307_52451390_52451528_52451743_52451859_52452105_52452253_52452482_52452514_52453991
transcript_99925.known	chr3	+	5139	21	FSM	ENSG00000010322.16	ENST00000345716.9	5139	21	0	0	0	0	multi-exon	FALSE	canonical	3	199	junction_13	34.3459968555289	37	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGCATCTTCTAAACCAAGGG	52446179	True	NA	13	True	AATAAA	-19	NA	52455603	52493068	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52484512_52484638_52485777_52485828_52487195_52488606_52489335_52489679_52490074_52490232_52490704_52490834_52491351_52491514_52491871
transcript_99926.known	chr3	+	2589	14	FSM	ENSG00000010322.16	ENST00000420808.2	2589	14	0	0	0	0	multi-exon	TRUE	canonical	3	30	junction_13	77.5970474641138	116	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTGCACCTCTCTTTCCTTT	52446192	True	NA	10	True	AATAAA	-20	NA	52455616	52481914	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733_52473830_52476446_52476600_52477573_52477643_52478096_52478283_52478448_52478578_52479748_52479863_52480183_52480296_52480878
transcript_99930.nic	chr3	+	1096	7	ISM	ENSG00000010322.16	ENST00000488380.5	3168	13	-41	7816	-28	1721	5prime_fragment	FALSE	canonical	3	288	junction_6	18.0716167880279	33	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	5	TGTCATTGGTGTTTTTGTGT	52446151	True	NA	NA	False	AATAAA	-4	NA	52455575	52474094	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	ISM_chr3_+_52455735_52457842_52457927_52458661_52458845_52470858_52470908_52471813_52471978_52472302_52472399_52473733
transcript_99940.known	chr3	-	2047	14	FSM	ENSG00000168268.11	ENST00000307076.8	2047	14	0	0	0	0	multi-exon	FALSE	canonical	3	5	junction_13	552.386623886315	99	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TGCATGCTTCTGCTTTCAGC	-52534963	True	NA	-23	True	AATAAA	-17	NA	52535054	52524386	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52524732_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616_52527719_52527828_52527932_52528012_52528074_52528182_52528312_52528445_52528540_52528636_52528693_52528860_52528936_52529149_52529335_52534532
transcript_99944.known	chr3	+	314	3	FSM	ENSG00000168273.8	ENST00000491607.5	314	3	0	0	0	0	multi-exon	FALSE	canonical	3	14	junction_2	1	150	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CTATTGGTTTCAGTGCCTTT	52533793	True	NA	22	True	AATAAA	-18	NA	52534012	52540526	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52534149_52534802_52534878_52540423
transcript_99946.known	chr3	+	274	2	FSM	ENSG00000168273.8	ENST00000307106.3	274	2	0	0	0	0	multi-exon	FALSE	canonical	3	205	junction_1	0	1325	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	ACTATTGGTTTCAGTGCCTT	52531366	True	NA	21	True	AATAAA	-17	NA	52536601	52540525	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52536774_52540423
transcript_99947.known	chr3	-	670	6	FSM	ENSG00000168268.11	ENST00000463947.5	670	6	0	0	0	0	multi-exon	FALSE	canonical	3	224	junction_1	757.183623700354	23	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	CATGCTTCTGCTTTCAGCCC	-52527593	False	NA	-21	True	AATAAA	-19	NA	52527684	52524384	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52524612_52524816_52524882_52524962_52525104_52525208_52525296_52527293_52527376_52527616
transcript_99948.known	chr3	+	1769	2	FSM	ENSG00000168273.8	ENST00000477703.6	1769	2	0	0	0	0	multi-exon	FALSE	canonical	3	260	junction_1	0	1916	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	0	CTTTTGTGTCTGCTGTGGGT	52531369	True	NA	4	True	AATAAA	-13	NA	52536604	52541890	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52536907_52540423
transcript_9995.nic	chr1	+	1980	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	246	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	96.0971730420134	179	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150257474	False	NA	15	True	ATTAAA	-15	NA	150257496	150265078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263658_150263680_150264592
transcript_99950.known	chr3	+	2041	15	FSM	ENSG00000163938.17	ENST00000394799.6	2041	15	0	0	0	0	multi-exon	FALSE	canonical	3	20	junction_1	373.901329339216	1897	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	45	AAAAATGTAAGTTTTATTTA	52665059	True	NA	-2	True	AATAAA	-19	NA	52686015	52694492	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686203_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_99957.known	chr3	-	1826	11	FSM	ENSG00000016864.19	ENST00000478968.6	1826	11	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_10	83.2334668267519	288	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	AGGTATCTTCTTTTTTTATT	-52702692	True	NA	-10	True	AATAAA	-17	NA	52705791	52694488	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52704723_52704953_52705702
transcript_99958.known	chr3	-	1856	10	FSM	ENSG00000016864.19	ENST00000266014.11	1856	10	0	0	0	0	multi-exon	FALSE	canonical	3	102	junction_9	51.667741924295	196	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TATCTTCTTTTTTTATTCCA	-52702692	True	NA	-7	True	AATAAA	-20	NA	52705791	52694485	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705446
transcript_99959.known	chr3	-	1577	10	FSM	ENSG00000016864.19	ENST00000491606.5	1577	10	0	0	0	0	multi-exon	FALSE	canonical	0	0	junction_9	82.6599459633665	114	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TTACATTTTTCAATAGGTAT	-52702682	True	NA	-24	True	AATAAA	-3	NA	52705781	52694502	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52705698
transcript_9996.nic	chr1	+	1977	10	NIC	ENSG00000118298.12	novel	1788	11	NA	NA	246	0	combination_of_known_junctions	FALSE	canonical	3	108	junction_9	116.318528188763	127	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	10	TTCTGGCCTATCCTTTGAGG	150257474	False	NA	15	True	ATTAAA	-15	NA	150257496	150265078	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	NIC_chr1_+_150258184_150260150_150260172_150261458_150261639_150262157_150262301_150262524_150262621_150262803_150262871_150263041_150263200_150263298_150263420_150263661_150263680_150264592
transcript_99977.known	chr3	+	1933	15	FSM	ENSG00000163938.17	ENST00000418458.6	1933	15	0	0	0	0	multi-exon	FALSE	canonical	3	1124	junction_7	161.179912786036	9405	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	30	TGTAAGTTTTATTTACAGAT	52665075	True	NA	3	True	AATAAA	-24	NA	52686031	52694497	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52690705_52690944_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_99978.known	chr3	+	2118	14	FSM	ENSG00000163938.17	ENST00000496254.5	2118	14	0	0	0	0	multi-exon	FALSE	canonical	3	1133	junction_4	154.638345023087	658	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	50	GTTATCTGGAATAAAAAAAG	52665092	True	NA	-35	True	AAAAAG	-29	NA	52686048	52694459	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688193_52689073_52689207_52690591_52691072_52691541_52691630_52692871_52693047_52693186_52693330_52693407_52693545_52693631_52693808_52694036_52694104_52694192
transcript_99979.known	chr3	+	729	7	FSM	ENSG00000163938.17	ENST00000492349.5	729	7	0	0	0	0	multi-exon	FALSE	canonical	3	67	junction_5	485.189653640718	312	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	25	GTATCCTTTATTAGTGGTAA	52665075	True	NA	NA	False	GATAAA	-16	NA	52686031	52690704	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_52686106_52686768_52686828_52687245_52687384_52687501_52687616_52688108_52688207_52689073_52689207_52690591
transcript_99980.known	chr3	-	1621	10	FSM	ENSG00000016864.19	ENST00000394783.7	1621	10	0	0	0	0	multi-exon	FALSE	canonical	2	12	junction_9	78.9697551105626	110	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	20	AATAGGTATCTTCTTTTTTT	-52703267	False	NA	-13	True	AATAAA	-14	NA	52703619	52694491	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52695036_52695189_52695303_52695420_52695588_52695927_52696041_52696233_52696319_52696541_52696660_52697720_52697935_52700261_52700361_52700444_52700497_52703503
transcript_99981.known	chr3	-	514	3	FSM	ENSG00000213533.13	ENST00000485356.1	514	3	0	0	0	0	multi-exon	FALSE	canonical	3	18	junction_1	99.5	69	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	20	ACATGCCTGAGGTTGTTCAT	NA	False	NA	NA	False	ATTAAA	-17	NA	52852699	52847256	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52847552_52849791_52849914_52852602
transcript_99982.known	chr3	-	523	3	FSM	ENSG00000272573.6	ENST00000446157.3	523	3	0	0	0	0	multi-exon	FALSE	canonical	3	43	junction_2	11	10	NA	NA	FALSE	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	TCAGAAGGTGTTGGTTGGTC	-52835008	False	NA	-4	True	AATAAA	-26	NA	52835019	52833120	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_52833431_52833616_52833750_52834939
transcript_99984.known	chr3	+	1957	1	FSM	ENSG00000280417.1	ENST00000623443.1	1957	1	0	0	0	0	mono-exon	FALSE	NA	NA	NA	NA	NA	1	NA	NA	NA	0	NA	NA	A	non_coding	NA	NA	NA	NA	NA	NA	NA	15	CTACCACTGTCATCGGTTGT	53046142	False	NA	11	True	AGTAAA	-17	NA	53046165	53048122	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_+_53046200_53048100
transcript_99989.known	chr3	-	5081	13	FSM	ENSG00000163933.10	ENST00000296292.8	5081	13	0	0	0	0	multi-exon	FALSE	canonical	3	255	junction_7	35.5132017706092	270	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	15	GACCTTTCTTCTTTCATACC	-53127948	True	NA	4	True	AATAAA	-25	NA	53130435	53088482	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53123723_53123841_53125908_53125995_53130337
transcript_99992.known	chr3	-	1800	12	FSM	ENSG00000163933.10	ENST00000394738.7	1800	12	0	0	0	0	multi-exon	FALSE	canonical	1	1	junction_10	96.5249079317855	11	NA	NA	FALSE	0	NA	NA	C	non_coding	NA	NA	NA	NA	NA	NA	NA	35	TTATCATTTTATAGTAATCA	-53127966	True	NA	-22	True	TTTAAA	-13	NA	53130453	53091664	WTC11_captrap_ont	iso_detect_ref_spbu_long_captrap_ont	FSM_chr3_-_53092071_53092368_53092619_53099380_53099487_53103952_53104098_53105672_53105804_53106818_53106870_53111829_53111909_53119883_53120022_53121698_53121801_53122373_53122564_53125908_53125995_53130337
